161 c3alfA_ Probab=96.16   E-value=0.11  Score=30.43  Aligned_columns=190  Identities=17%

Q ss_pred             CHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf             98999999999999985178865887253246765588988899998715887732245685566889998899899999
Q batch____       439 DDRVRAQVGMLYEDLAGHAAFDGILFHDDALLSDYEDASAPAITAYQQAGFSGSLSEIRQNPEQFKQWARFKSRALTDFT  518 (672)
Q Consensus       439 ~p~vr~~i~~l~~dl~~~y~idGI~f~dd~~~~~~e~~~~~a~~~y~~~g~~~~~~~~~~~~~~~~~W~~~k~~~l~~f~  518 (672)
                      ++..|+...+=+.++++.|.+|||-+|-.+      .........+                          +.-+..+.
T Consensus        87 ~~~~r~~Fi~~l~~~l~~~~fDGIdiDwE~------~~~~~~~~~~--------------------------~~~~~~~~  134 (348)
T c3alfA_          87 QPNSRKSFIDSSIRLARQLGFHGLDLDWEY------PLSAADMTNL--------------------------GTLLNEWR  134 (348)
T ss_dssp             SHHHHHHHHHHHHHHHHHHTCSEEEEECCC------CCSHHHHHHH--------------------------HHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHHHCCCCEEEEEEEE------CCCCCCCCCC--------------------------CHHHHHHH
T ss_conf             989999999999999872799657997110------4554111475--------------------------64689999


Q ss_pred             HHHHHHHHHHCCCCCEEECCCCCCCCCCHHHHHHHHCCHHHHHHHCCEEEEEEHHHHCCCCCCCH------------HHH
Q ss_conf             99999997432877536102331003677889887468898986178446830233125565677------------999
Q batch____       519 LELSARVKAIRGPHIKTARNIFALPVIQPESEAWFAQNYADFLKSYDWTAIMAMPYLEGVAEKSA------------DQW  586 (672)
Q Consensus       519 ~~l~~~vk~~~~p~l~~a~~i~~~~~~~~~~~~w~aQ~~~~~l~~yD~~~i~~m~y~~~~~~~~~------------~~~  586 (672)
                      ..+....+...++....+..+.+.+.....+.     +...+.+..|++.+|++-+.........            ..+
T Consensus       135 ~~l~~~~~~~~~~~~~l~~a~~~~~~~~~~~~-----~~~~l~~~~D~i~im~yd~~g~~~~~~~~~~~a~~~~~~~~~~  209 (348)
T c3alfA_         135 TAINTEARNSGRAALLLTAAVSNSPRVNGLNY-----PVESLARNLDWINLMAYDFYGPNWSPSQTNSHAQLFDPVNHVS  209 (348)
T ss_dssp             HHHHHHHHHHCSCCCEEEEEEESSSEETTEEC-----CHHHHHHHCSEEEEECCCSSCTTTSTTBCCCSSCSCCTTTCCS
T ss_pred             HHHHHHHHHHCCCCEEEEEECCCCCHHHHCCC-----CHHHHHHHCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf             99999788608883189997057700121068-----6444210011133322014567777887888888778667644


Q ss_pred             HHHHHHHHHHCCCCCCCEEEEEECCC--CCCCC-----------------------------------------------
Q ss_conf             99999988514677442478742126--57777-----------------------------------------------
Q batch____       587 LIQLTNQIKNIPQAKDKSILELQAQN--WQKNG-----------------------------------------------  617 (672)
Q Consensus       587 l~~l~~~~~~~~~~~~~~vfeLqa~d--w~~~~-----------------------------------------------  617 (672)
                      ...-++.+.+.-..++|+++++..++  |....                                               
T Consensus       210 ~~~~v~~~~~~g~p~~KlvlGip~yG~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~y~~i~~~~~~~~~~~~~d~~~~  289 (348)
T c3alfA_         210 GSDGINAWIQAGVPTKKLVLGIPFYGYAWRLVNANIHGLRAPAAGKSNVGAVDDGSMTYNRIRDYIVESRATTVYNATIV  289 (348)
T ss_dssp             HHHHHHHHHHTTCCGGGEEEEEESEEEEEEESCTTCCSTTCBEEEECTTSCTTTCEEEHHHHHHHHHHHTCEEEEETTTT
T ss_pred             HHHHHHHHHHCCCCHHHEEEEEECCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHCCCEEEECCCCC
T ss_conf             89999999986999778798654142022136777677887645677877677862758999987763897799861326


Q ss_pred             ------CCCCCC---HHHHHHHHHHHHHCCCCEEEECCCCHHCCCCCHHHHHHHHHH
Q ss_conf             ------646899---889999999999576653893265010378666788776410
Q batch____       618 ------QHQAIS---SQQLAHWMSLLQLNGVKNYGYYPDNFLHNQPEIDLIRPEFST  665 (672)
Q Consensus       618 ------~~~~i~---~~~L~~q~~~l~~~G~~~~~yyp~~~~~~~p~~~~~~~~~s~  665 (672)
                            ..+||+   ...|...++..+++|.+|++.+--+.--..-..+.+...+-+
T Consensus       290 ~~y~~~~~~~v~y~d~~Sl~~K~~~~~~~~LgGv~~W~l~~Dd~~gl~~~~~~~~~~  346 (348)
T c3alfA_         290 GDYCYSGSNWISYDDTQTVRNKVNYVKGRGLLGYFAWHVAGDQNWGLSRTASQTWGV  346 (348)
T ss_dssp             EEEEEETTEEEEECCHHHHHHHHHHHHHTTCSEEEEECGGGSSTTHHHHHHHHHHCS
T ss_pred             CCEEEECCEEEEECCHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHCCC
T ss_conf             435885887998399899999999999739967999861686743799998985187