75 c1ud8A_ Probab=97.80   E-value=0.0025  Score=41.02  Aligned_columns=162  Identities=16%

Q ss_pred             HHHHHHHHHHHHCCCCEEEEEEEE--CCCCCCCCCEEEC-----------CCCCCCCCCCCHHHHHHHHHHHCCCEEEE-
Q ss_conf             769999999986499789999861--5786655550113-----------57778864672458889876530875797-
Q batch____       334 RNIDVLIQRVKDMQISTVYLQAFA--DPDGDGLVKEVWF-----------PNRLLPMKADIFSRVAWQLRTRSGVNIYA-  399 (672)
Q Consensus       334 ~~l~~lldr~~~~~~ntV~lq~~~--~p~gd~~~~~~yf-----------p~~~~P~~~d~~~~~a~ql~~r~g~~v~A-  399 (672)
                      +.|.+-||.|+.||+|+|.|-...  .+..+.-|+..-|           -+.++--..|+  +-.+..+|++||+|.. 
T Consensus        23 ~~i~~kldyl~~lGvtaIwl~Pi~~~~~~~~~GY~~~d~y~~~~~~~~~~vd~~~Gt~~dl--k~LV~~aH~~GI~VilD  100 (480)
T c1ud8A_          23 NRLHDDAAALSDAGITAIWIPPAYKGNSQADVGYGAYDLYDLGEFNQKGTVRTKYGTKAQL--ERAIGSLKSNDINVYGD  100 (480)
T ss_dssp             HHHHHHHHHHHHHTCCEEEECCCSEESSTTCCSSSEEETTCSSCSCBTTBSSCSSCCHHHH--HHHHHHHHHTTCEEEEE
T ss_pred             HHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHH--HHHHHHHHHCCCEEEEE
T ss_conf             9999855758974998999888756899999885353454443435555307778899999--99999999889889999


Q ss_pred             --------------------------------------------------------EECHHHCCCCCCCCCCCCCCCCCC
Q ss_conf             --------------------------------------------------------401110147742222321246665
Q batch____       400 --------------------------------------------------------WMPVLSWDLDPTLTRVKYLPTGEK  423 (672)
Q Consensus       400 --------------------------------------------------------W~~~~~~~~~~~~~~~~~~~~~~~  423 (672)
                                                                              |...-..+.+..............
T Consensus       101 ~V~NH~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  180 (480)
T c1ud8A_         101 VVMNHKMGADFTEAVQAVQVNPTNRWQDISGAYTIDAWTGFDFSGRNNAYSDFKWRWFHFNGVDWDQRYQENHIFRFANT  180 (480)
T ss_dssp             ECCSEECCCSEEEEEEEEEEETTEEEEECSCCEEEEEEEEBCCGGGTTSSCCCCBCGGGEEEEEEETTTTEEEEEEETTC
T ss_pred             EEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCC
T ss_conf             96435678875321100146877654345666454554555667776777766655566556777887575621124777


Q ss_pred             CCCCCCCCCCC---------CCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHCCCCCCC
Q ss_conf             76146578403---------577798999999999999985178865887253246765588988899998715887732
Q batch____       424 KAQIHPEQYHR---------LSPFDDRVRAQVGMLYEDLAGHAAFDGILFHDDALLSDYEDASAPAITAYQQAGFSGSLS  494 (672)
Q Consensus       424 ~~~~~~~~~~~---------l~P~~p~vr~~i~~l~~dl~~~y~idGI~f~dd~~~~~~e~~~~~a~~~y~~~g~~~~~~  494 (672)
                      ...........         |+-.+|+|+++|.+...-.+..++|||.-+  |+..+-.                     
T Consensus       181 ~~~~~~~~~~~~~~~~~~~Dln~~np~V~~~l~~~~~~w~~~~giDGfR~--Dav~hi~---------------------  237 (480)
T c1ud8A_         181 NWNWRVDEENGNYDYLLGSNIDFSHPEVQDELKDWGSWFTDELDLDGYRL--DAIKHIP---------------------  237 (480)
T ss_dssp             CCCSSCCCTTSCCCCCSSEEECTTSHHHHHHHHHHHHHHHHHHTCSEEEE--TTTTSSC---------------------
T ss_pred             CCCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEE--CCCCCCC---------------------
T ss_conf             67756765201202567653678899999999999999998459989998--4502688---------------------


Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCC
Q ss_conf             2456855668899988998999999999999743287753610233
Q batch____       495 EIRQNPEQFKQWARFKSRALTDFTLELSARVKAIRGPHIKTARNIF  540 (672)
Q Consensus       495 ~~~~~~~~~~~W~~~k~~~l~~f~~~l~~~vk~~~~p~l~~a~~i~  540 (672)
                                          .+|..++.+.++...+|...+-..++
T Consensus       238 --------------------~~~~~~~~~~~~~~~~~~~~~~gE~~  263 (480)
T c1ud8A_         238 --------------------FWYTSDWVRHQRNEADQDLFVVGEYW  263 (480)
T ss_dssp             --------------------HHHHHHHHHHHHHHCSSCCEEEECCC
T ss_pred             --------------------HHHHHHHHHHHHHHCCCCEEEEEEEE
T ss_conf             --------------------99999999999740289759999771