BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (353 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_Q9JMT8 Uncharacterized HTH-type transcriptional regulat... 721 0.0 UniRef50_P21514 Cyclic di-GMP phosphodiesterase yahA n=51 Tax=Es... 181 3e-44 UniRef50_C1HI32 Rtn protein n=6 Tax=Escherichia RepID=C1HI32_9ESCH 134 4e-30 UniRef50_D2TJN3 Putative exported protein n=1 Tax=Citrobacter ro... 112 2e-23 UniRef50_A6AP35 Protein rtn n=4 Tax=Vibrionales RepID=A6AP35_VIBHA 107 4e-22 UniRef50_Q2L0M3 Putative signaling protein (Fragment) n=1 Tax=Bo... 107 7e-22 UniRef50_B6ICR3 Putative uncharacterized protein n=1 Tax=Escheri... 105 2e-21 UniRef50_B4T8H8 Cyclic diguanylate phosphodiesterase (EAL) domai... 104 5e-21 UniRef50_Q7BQS9 Sea19 n=1 Tax=Serratia entomophila RepID=Q7BQS9_... 103 8e-21 UniRef50_D0GSB3 Rtn protein n=6 Tax=Vibrio RepID=D0GSB3_VIBMI 103 9e-21 UniRef50_A0KH05 EAL domain protein n=1 Tax=Aeromonas hydrophila ... 102 2e-20 UniRef50_A4SI84 EAL domain protein n=3 Tax=Gammaproteobacteria R... 102 3e-20 UniRef50_B5XY29 Cyclic diguanylate phosphodiesterase (EAL) domai... 101 5e-20 UniRef50_Q2KYK4 Putative signaling protein (Fragment) n=3 Tax=Bo... 100 7e-20 UniRef50_B2VJL5 Putative uncharacterized protein rtn n=1 Tax=Erw... 100 8e-20 UniRef50_P75995 Uncharacterized protein ycgG n=33 Tax=Enterobact... 99 2e-19 UniRef50_C9PEG9 Rtn protein n=1 Tax=Vibrio furnissii CIP 102972 ... 99 2e-19 UniRef50_C6C3R8 Diguanylate phosphodiesterase n=1 Tax=Dickeya da... 99 3e-19 UniRef50_Q1LGY0 EAL-containing signal transduction protein n=2 T... 98 5e-19 UniRef50_D2TJM6 Putative uncharacterized protein n=1 Tax=Citroba... 97 7e-19 UniRef50_C5BG29 Cyclic diguanylate phosphodiesterase (EAL) n=2 T... 97 1e-18 UniRef50_B1M4V3 Diguanylate cyclase/phosphodiesterase with PAS/P... 96 1e-18 UniRef50_A0KNV8 Rtn protein n=9 Tax=Gammaproteobacteria RepID=A0... 96 2e-18 UniRef50_P76446 Protein rtn n=101 Tax=Enterobacteriaceae RepID=R... 95 4e-18 UniRef50_UPI0001826354 diguanylate phosphodiesterase n=1 Tax=Ent... 94 6e-18 UniRef50_Q1VEI6 Putative uncharacterized protein n=1 Tax=Vibrio ... 94 7e-18 UniRef50_B4TLS8 Cyclic diguanylate phosphodiesterase (EAL) domai... 94 1e-17 UniRef50_B9QXK7 Cyclic diguanylate phosphodiesterase domain prot... 92 2e-17 UniRef50_A6V3S1 Aminoglycoside response regulator n=3 Tax=Proteo... 92 3e-17 UniRef50_C9PD80 Rtn protein n=2 Tax=Vibrio RepID=C9PD80_VIBFU 92 3e-17 UniRef50_C6CFE9 Diguanylate phosphodiesterase n=2 Tax=Dickeya Re... 92 4e-17 UniRef50_B9L066 C-di-GMP phosphodiesterase A n=1 Tax=Thermomicro... 91 5e-17 UniRef50_C6DJC0 EAL domain protein n=4 Tax=Pectobacterium RepID=... 91 6e-17 UniRef50_Q1ZT31 Putative uncharacterized protein n=2 Tax=Photoba... 91 8e-17 UniRef50_A4B9Y4 Putative uncharacterized protein n=1 Tax=Reineke... 91 9e-17 UniRef50_Q3ID42 Putative uncharacterized protein n=2 Tax=Alterom... 90 1e-16 UniRef50_Q3BN81 Putative signal transduction protein n=9 Tax=Xan... 89 2e-16 UniRef50_B8GSM4 Diguanylate cyclase/phosphodiesterase n=1 Tax=Th... 89 2e-16 UniRef50_Q31S15 EAL n=2 Tax=Synechococcus elongatus RepID=Q31S15... 89 3e-16 UniRef50_D0I5K6 Rtn protein n=1 Tax=Grimontia hollisae CIP 10188... 89 3e-16 UniRef50_A8HZ55 Putative sensory box/GGDEF family protein n=1 Ta... 89 3e-16 UniRef50_A7IP89 Diguanylate cyclase/phosphodiesterase with PAS/P... 88 4e-16 UniRef50_D0I998 Regulatory component of sensory transduction sys... 88 4e-16 UniRef50_C9Y1D6 Uncharacterized protein yjcC n=4 Tax=Enterobacte... 88 5e-16 UniRef50_A7IK26 Diguanylate cyclase/phosphodiesterase n=1 Tax=Xa... 88 5e-16 UniRef50_A4TND3 Membrane protein n=16 Tax=Enterobacteriaceae Rep... 88 5e-16 UniRef50_C6XNM0 Diguanylate cyclase/phosphodiesterase n=1 Tax=Hi... 87 6e-16 UniRef50_Q7P1U8 Putative uncharacterized protein n=1 Tax=Chromob... 87 7e-16 UniRef50_Q47UD6 Sensory box sensor/GGDEF/EAL domain protein n=1 ... 87 8e-16 UniRef50_B9MPE9 Diguanylate cyclase/phosphodiesterase with PAS/P... 87 8e-16 UniRef50_B4SIC9 Diguanylate cyclase/phosphodiesterase with PAS/P... 87 8e-16 UniRef50_B7KTV8 Diguanylate cyclase/phosphodiesterase with PAS/P... 87 1e-15 UniRef50_Q2BMA7 PAS:GGDEF protein n=1 Tax=Neptuniibacter caesari... 87 1e-15 UniRef50_A7K0U5 Sensory box/GGDEF family protein n=14 Tax=Vibrio... 87 1e-15 UniRef50_A9ME91 EAL n=35 Tax=Brucella RepID=A9ME91_BRUC2 87 1e-15 UniRef50_C5S5K8 Response regulator receiver modulated diguanylat... 87 1e-15 UniRef50_A6AJG8 Rtn protein n=1 Tax=Vibrio harveyi HY01 RepID=A6... 87 1e-15 UniRef50_B9Z8G8 Diguanylate cyclase/phosphodiesterase with PAS/P... 87 1e-15 UniRef50_Q0C2A3 Putative sensory box-containing diguanylate cycl... 87 1e-15 UniRef50_A5W2V7 Diguanylate phosphodiesterase n=16 Tax=Pseudomon... 87 1e-15 UniRef50_Q139W0 Diguanylate cyclase/phosphodiesterase with PAS/P... 87 1e-15 UniRef50_Q2SFI2 FOG: EAL domain n=1 Tax=Hahella chejuensis KCTC ... 86 1e-15 UniRef50_Q60BD0 Sensory box protein n=1 Tax=Methylococcus capsul... 86 1e-15 UniRef50_A9BUE4 Diguanylate cyclase/phosphodiesterase with PAS/P... 86 2e-15 UniRef50_Q1JXT2 Diguanylate cyclase/phosphodiesterase with PAS/P... 86 2e-15 UniRef50_C0QUQ4 Response regulator receiver modulated diguanylat... 86 2e-15 UniRef50_Q1Z8P6 Putative uncharacterized protein n=1 Tax=Photoba... 86 2e-15 UniRef50_B5W1G7 Diguanylate cyclase/phosphodiesterase n=3 Tax=Os... 86 2e-15 UniRef50_Q2J3Q8 Diguanylate cyclase/phosphodiesterase with GAF s... 86 2e-15 UniRef50_Q2Y9Y0 Response regulator receiver (CheY-like) modulate... 86 3e-15 UniRef50_Q3IG16 Putative uncharacterized protein n=2 Tax=Alterom... 86 3e-15 UniRef50_C1M6U9 Rtn protein n=1 Tax=Citrobacter sp. 30_2 RepID=C... 85 3e-15 UniRef50_Q48AL8 GGDEF/EAL domain protein n=1 Tax=Colwellia psych... 85 3e-15 UniRef50_A6UFR6 Diguanylate cyclase/phosphodiesterase n=15 Tax=R... 85 4e-15 UniRef50_A8GGV3 Diguanylate phosphodiesterase n=11 Tax=Enterobac... 85 4e-15 UniRef50_Q9HYT3 Uncharacterized signaling protein PA3311 n=9 Tax... 85 4e-15 UniRef50_C6NR21 Diguanylate cyclase/phosphodiesterase with PAS/P... 85 4e-15 UniRef50_A1K4Z0 EAL/GGDEF/PAS/PAC-domain containing signalling p... 85 5e-15 UniRef50_Q07X30 Diguanylate cyclase/phosphodiesterase with GAF s... 85 5e-15 UniRef50_C9YF35 Putative uncharacterized protein n=1 Tax=Curviba... 85 5e-15 UniRef50_Q1ZST1 Putative uncharacterized protein n=2 Tax=Photoba... 85 5e-15 UniRef50_UPI0001AEC58F hypothetical protein AmacA2_18780 n=1 Tax... 84 5e-15 UniRef50_A1U7E4 Diguanylate cyclase/phosphodiesterase n=1 Tax=Ma... 84 5e-15 UniRef50_A5ERD3 Diguanylate cyclase/phosphodiesterase n=12 Tax=B... 84 6e-15 UniRef50_B9R1X0 Cyclic diguanylate phosphodiesterase domain prot... 84 6e-15 UniRef50_B4SIA4 EAL domain protein n=4 Tax=Proteobacteria RepID=... 84 7e-15 UniRef50_C5T9I2 Diguanylate cyclase/phosphodiesterase (Fragment)... 84 7e-15 UniRef50_B2I7U8 EAL domain protein n=12 Tax=Xanthomonadaceae Rep... 84 9e-15 UniRef50_C1D1W4 Putative diguanylate-cyclase n=1 Tax=Deinococcus... 84 9e-15 UniRef50_C6PSS6 Diguanylate cyclase/phosphodiesterase with PAS/P... 84 9e-15 UniRef50_Q1N7J4 Putative uncharacterized protein n=1 Tax=Sphingo... 84 9e-15 UniRef50_C6XAG8 Diguanylate cyclase/phosphodiesterase with PAS/P... 84 1e-14 UniRef50_B8GMU1 Diguanylate cyclase/phosphodiesterase with PAS/P... 84 1e-14 UniRef50_Q1Z8Q2 Putative uncharacterized protein n=2 Tax=Photoba... 84 1e-14 UniRef50_D1B535 Diguanylate cyclase n=1 Tax=Sulfurospirillum del... 84 1e-14 UniRef50_D0IUW1 Diguanylate cyclase/phosphodiesterase with n=3 T... 84 1e-14 UniRef50_Q3SG75 Putative diguanylate cyclase/phosphodiesterase (... 84 1e-14 UniRef50_D0HE44 GGDEF family protein n=5 Tax=Vibrio RepID=D0HE44... 84 1e-14 UniRef50_B8H3B9 Sensory box/GGDEF family protein n=5 Tax=Cauloba... 83 1e-14 UniRef50_B5Y0R4 Cyclic diguanylate phosphodiesterase (EAL) domai... 83 1e-14 UniRef50_Q31E09 Diguanylate cyclase/phosphodiesterase n=1 Tax=Th... 83 1e-14 UniRef50_B2VIJ7 Rtn protein n=9 Tax=Enterobacteriaceae RepID=B2V... 83 1e-14 UniRef50_Q3SJ51 Putative diguanylate cyclase/phosphodiesterase (... 83 1e-14 UniRef50_C3X4A6 Signal transduction protein n=2 Tax=Oxalobacter ... 83 1e-14 UniRef50_C6XAD3 Diguanylate cyclase/phosphodiesterase with PAS/P... 83 2e-14 UniRef50_B1XYS1 Diguanylate cyclase/phosphodiesterase with PAS/P... 83 2e-14 UniRef50_A3WM41 Signaling protein with a ligand binding sensor d... 83 2e-14 UniRef50_A5ETG3 Diguanylate cyclase/phosphodiesterase n=6 Tax=ce... 83 2e-14 UniRef50_A8GFM2 EAL domain protein n=2 Tax=Serratia RepID=A8GFM2... 82 2e-14 UniRef50_Q3SJE6 Putative diguanylate cyclase/phosphodiesterase (... 82 2e-14 UniRef50_Q47HF3 Response regulator receiver modulated diguanylat... 82 2e-14 UniRef50_Q2IV14 Diguanylate cyclase/phosphodiesterase n=4 Tax=Rh... 82 2e-14 UniRef50_A0KK18 Cyclic diguanylate phosphodiesterase (EAL) domai... 82 2e-14 UniRef50_Q0A846 Diguanylate cyclase/phosphodiesterase with PAS/P... 82 3e-14 UniRef50_UPI0001C377AD response regulator/GGDEF domain/EAL domai... 82 3e-14 UniRef50_A5ETK5 Diguanylate cyclase/phosphodiesterase with PAS/P... 82 3e-14 UniRef50_A9BW89 Diguanylate cyclase/phosphodiesterase with PAS/P... 82 3e-14 UniRef50_A4BB62 Inner membrane protein PLUS sensory box protein ... 82 3e-14 UniRef50_A9HX93 PAS:GGDEF n=1 Tax=Roseobacter litoralis Och 149 ... 82 3e-14 UniRef50_Q98BI1 Mll5564 protein n=2 Tax=Mesorhizobium RepID=Q98B... 82 3e-14 UniRef50_A4XWY6 Diguanylate phosphodiesterase n=1 Tax=Pseudomona... 82 3e-14 UniRef50_Q2BPW4 Sensory box/GGDEF/EAL/CBS domain protein n=1 Tax... 82 3e-14 UniRef50_Q21KC5 Diguanylate cyclase/phosphodiesterase n=1 Tax=Sa... 82 4e-14 UniRef50_B9JYX6 GGDEF family protein n=1 Tax=Agrobacterium vitis... 82 4e-14 UniRef50_B6BJN9 Sensory box sensor/ggdef/eal domain protein n=2 ... 82 4e-14 UniRef50_P74400 Sll0267 protein n=3 Tax=Bacteria RepID=P74400_SYNY3 82 4e-14 UniRef50_A3JB19 Putative uncharacterized protein n=1 Tax=Marinob... 82 4e-14 UniRef50_A1W7N9 Diguanylate cyclase/phosphodiesterase with PAS/P... 81 4e-14 UniRef50_A6FHU8 GGDEF family protein n=1 Tax=Moritella sp. PE36 ... 81 5e-14 UniRef50_Q07T95 Diguanylate cyclase/phosphodiesterase n=1 Tax=Rh... 81 5e-14 UniRef50_B3E5T4 Response regulator receiver modulated diguanylat... 81 5e-14 UniRef50_C8QG51 EAL domain protein n=3 Tax=Enterobacteriaceae Re... 81 5e-14 UniRef50_UPI0001BC3870 diguanylate cyclase/phosphodiesterase wit... 81 5e-14 UniRef50_C5T9Y9 Diguanylate cyclase/phosphodiesterase with extra... 81 6e-14 UniRef50_Q2BRD7 Two-component response regulator n=1 Tax=Neptuni... 81 6e-14 UniRef50_A3DCG7 Diguanylate cyclase/phosphodiesterase with PAS/P... 81 6e-14 UniRef50_A1WHK4 Diguanylate cyclase/phosphodiesterase with PAS/P... 81 6e-14 UniRef50_C6X932 Diguanylate phosphodiesterase n=1 Tax=Methylovor... 81 7e-14 UniRef50_Q1JW15 Diguanylate cyclase/phosphodiesterase with PAS/P... 81 7e-14 UniRef50_Q1IP01 Periplasmic sensor diguanylate phophodiesterase ... 81 7e-14 UniRef50_C5V3L4 Diguanylate cyclase/phosphodiesterase with PAS/P... 81 7e-14 UniRef50_B7S1Z2 Cyclic diguanylate phosphodiesterase domain prot... 81 7e-14 UniRef50_B1Y236 Diguanylate cyclase/phosphodiesterase with PAS/P... 81 7e-14 UniRef50_B9R6G6 Putative uncharacterized protein n=1 Tax=Labrenz... 80 8e-14 UniRef50_C0QQR2 Response regulator receiver modulated diguanylat... 80 8e-14 UniRef50_Q1JXC9 Diguanylate cyclase/phosphodiesterase with PAS/P... 80 8e-14 UniRef50_D0KJQ5 EAL domain protein n=4 Tax=Pectobacterium RepID=... 80 9e-14 UniRef50_A1ASK8 Response regulator receiver modulated diguanylat... 80 9e-14 UniRef50_Q7CVL6 GGDEF family protein n=1 Tax=Agrobacterium tumef... 80 1e-13 UniRef50_D1AZY7 Diguanylate cyclase n=1 Tax=Sulfurospirillum del... 80 1e-13 UniRef50_A4BT02 Sensory box/GGDEF family protein n=1 Tax=Nitroco... 80 1e-13 UniRef50_C6WZ79 Diguanylate cyclase/phosphodiesterase with PAS/P... 80 1e-13 UniRef50_C3J4U2 Diguanylate phosphodiesterase n=1 Tax=Geobacillu... 80 1e-13 UniRef50_A7GAB5 Multisensor diguanylate cyclase/phophodiesterase... 80 1e-13 UniRef50_B9MBY4 Diguanylate cyclase/phosphodiesterase with PAS/P... 80 1e-13 UniRef50_Q20XI9 Diguanylate cyclase/phosphodiesterase n=11 Tax=B... 80 1e-13 UniRef50_Q2SQ18 Predicted signal transduction protein containing... 80 1e-13 UniRef50_Q13LN9 Diguanylate cyclase/phosphodiesterase n=6 Tax=Bu... 80 1e-13 UniRef50_B5VXY3 Diguanylate cyclase/phosphodiesterase with PAS/P... 80 1e-13 UniRef50_A1VFP9 Periplasmic sensor diguanylate cyclase/phosphodi... 80 1e-13 UniRef50_B5JV46 Two-component response regulator n=1 Tax=gamma p... 80 2e-13 UniRef50_A6EV43 Sensory box protein/GGDEF domain protein n=1 Tax... 80 2e-13 UniRef50_A4BCU3 Response regulator/sensory box/GGDEF domain/EAL ... 80 2e-13 UniRef50_Q1ASD1 Diguanylate cyclase/phosphodiesterase with PAS/P... 80 2e-13 UniRef50_D0Z2V6 Rtn protein n=1 Tax=Photobacterium damselae subs... 79 2e-13 UniRef50_A1K7N9 GGDEF/EAL/PAS-domain containing protein n=1 Tax=... 79 2e-13 UniRef50_B2UHD8 PTS system, lactose/cellobiose family IIC subuni... 79 2e-13 UniRef50_B1M2C0 Diguanylate cyclase/phosphodiesterase with PAS/P... 79 2e-13 UniRef50_A4SJC3 GGDEF domain protein n=2 Tax=Aeromonas RepID=A4S... 79 2e-13 UniRef50_C6NYX6 Response regulator receiver modulated diguanylat... 79 2e-13 UniRef50_Q89S23 Blr2589 protein n=1 Tax=Bradyrhizobium japonicum... 79 2e-13 UniRef50_B6JGP3 Diguanylate cyclase/phosphodiesterase n=1 Tax=Ol... 79 2e-13 UniRef50_D1VQL1 Diguanylate cyclase/phosphodiesterase with GAF s... 79 2e-13 UniRef50_B6BNH0 Sensory box/ggdef domain/eal domain protein n=1 ... 79 2e-13 UniRef50_C0D662 Putative uncharacterized protein n=1 Tax=Clostri... 79 2e-13 UniRef50_A0NTL0 Putative uncharacterized protein n=1 Tax=Labrenz... 79 2e-13 UniRef50_C1D4T3 Diguanylate cyclase/phosphodiesterase with PAS/P... 79 2e-13 UniRef50_C7LTY3 Diguanylate cyclase/phosphodiesterase with PAS/P... 79 2e-13 UniRef50_D0L1D4 Diguanylate cyclase/phosphodiesterase with PAS/P... 79 2e-13 UniRef50_C6X7I8 Response regulator receiver modulated diguanylat... 79 2e-13 UniRef50_B1Y791 Diguanylate cyclase/phosphodiesterase with PAS/P... 79 2e-13 UniRef50_D2UAD2 Hypothetical c-di-gmp phosphodiesterase or signa... 79 2e-13 UniRef50_A5G085 Diguanylate cyclase/phosphodiesterase n=1 Tax=Ac... 79 2e-13 UniRef50_Q9ABX9 Uncharacterized signaling protein CC_0091 n=3 Ta... 79 2e-13 UniRef50_Q1NRJ4 PAS:GGDEF:EAL:GAF n=5 Tax=Deltaproteobacteria Re... 79 2e-13 UniRef50_Q1K2C5 Diguanylate cyclase/phosphodiesterase n=1 Tax=De... 79 2e-13 UniRef50_A8UU60 Putative uncharacterized protein n=1 Tax=Hydroge... 79 2e-13 UniRef50_C9XWJ5 Protein rtn n=9 Tax=Enterobacteriaceae RepID=C9X... 79 2e-13 UniRef50_Q1NQ51 PAS:GGDEF:EAL n=1 Tax=delta proteobacterium MLMS... 79 2e-13 UniRef50_Q47U99 Sensory box/GGDEF/EAL domain protein n=1 Tax=Col... 79 2e-13 UniRef50_C6NZZ7 Diguanylate cyclase/phosphodiesterase with PAS/P... 79 2e-13 UniRef50_C6P1A0 Diguanylate cyclase/phosphodiesterase with PAS/P... 79 3e-13 UniRef50_Q5NYX4 Complex sensory protein with histidine kinase do... 79 3e-13 UniRef50_Q47AF7 Diguanylate cyclase/phosphodiesterase with PAS/P... 79 3e-13 UniRef50_C7RTE0 Response regulator receiver modulated diguanylat... 79 3e-13 UniRef50_A5EP96 Diguanylate cyclase/phosphodiesterase with PAS/P... 79 3e-13 UniRef50_Q2BRK3 Putative uncharacterized protein n=1 Tax=Neptuni... 79 3e-13 UniRef50_Q3IDF2 Putative uncharacterized protein n=1 Tax=Pseudoa... 79 3e-13 UniRef50_Q2SFK1 FOG: EAL domain n=1 Tax=Hahella chejuensis KCTC ... 79 3e-13 UniRef50_A6Q176 Signal transduction response regulator n=1 Tax=N... 79 3e-13 UniRef50_B7ASA5 Putative uncharacterized protein n=1 Tax=Bactero... 79 3e-13 UniRef50_Q1YJA6 Putative diguanylate cyclase n=1 Tax=Aurantimona... 79 3e-13 UniRef50_B3PC21 Sensory box protein n=1 Tax=Cellvibrio japonicus... 79 3e-13 UniRef50_B6BNA1 Diguanylate cyclase/phosphodiesterase n=1 Tax=Ca... 78 4e-13 UniRef50_A3IAQ2 Sensor histidine kinase; possible sporulation ki... 78 4e-13 UniRef50_B9M1S6 Diguanylate cyclase/phosphodiesterase with PAS/P... 78 4e-13 UniRef50_A6T0F0 Sensory box/GGDEF family protein n=2 Tax=Oxaloba... 78 4e-13 UniRef50_Q3MFD3 Diguanylate cyclase/phosphodiesterase n=4 Tax=No... 78 4e-13 UniRef50_B8CUT1 EAL domain protein n=1 Tax=Shewanella piezotoler... 78 4e-13 UniRef50_A4BDU9 EAL domain protein n=1 Tax=Reinekea blandensis M... 78 4e-13 UniRef50_B9L5S2 Sensory box/ggdef family protein n=1 Tax=Nautili... 78 4e-13 UniRef50_C8QYF1 Diguanylate cyclase/phosphodiesterase n=1 Tax=De... 78 4e-13 UniRef50_C0N3Y7 Putative uncharacterized protein n=1 Tax=Methylo... 78 4e-13 UniRef50_A5KX08 Sensory box/GGDEF family protein n=1 Tax=Vibrion... 78 4e-13 UniRef50_A4EE01 Putative uncharacterized protein n=1 Tax=Roseoba... 78 4e-13 UniRef50_A1WHK3 Diguanylate cyclase/phosphodiesterase with PAS/P... 78 5e-13 UniRef50_B9LZ98 Diguanylate cyclase/phosphodiesterase with PAS/P... 78 5e-13 UniRef50_A8VZA5 Signal transduction protein containing a membran... 78 5e-13 UniRef50_B1QUK2 Diguanylate cyclase/phosphodiesterase n=2 Tax=Cl... 78 5e-13 UniRef50_B8G486 Response regulator receiver modulated diguanylat... 78 5e-13 UniRef50_A5V6G6 Diguanylate cyclase/phosphodiesterase n=1 Tax=Sp... 78 5e-13 UniRef50_UPI00016C0A24 putative signaling protein n=1 Tax=Epulop... 78 5e-13 UniRef50_Q2BNG9 PAS sensor diguanylate cyclase/phosphodiesterase... 78 5e-13 UniRef50_C5CTK8 Diguanylate cyclase/phosphodiesterase with PAS/P... 78 5e-13 UniRef50_Q7W9Y7 Putative membrane protein n=2 Tax=Bordetella Rep... 78 6e-13 UniRef50_B9JND8 Kinase protein n=1 Tax=Agrobacterium radiobacter... 78 6e-13 UniRef50_D0ZGP0 Diguanylate cyclase/phosphodiesterase n=2 Tax=Ed... 78 6e-13 UniRef50_Q1NJA1 PAS:GGDEF:EAL n=7 Tax=delta proteobacterium MLMS... 78 6e-13 UniRef50_Q47X88 Sensory box sensor/GGDEF/EAL domain protein n=2 ... 78 6e-13 UniRef50_Q2W3S8 Predicted signal transduction protein containing... 78 6e-13 UniRef50_C8S5L4 Diguanylate cyclase/phosphodiesterase with PAS/P... 78 6e-13 UniRef50_A0KT96 EAL domain protein n=9 Tax=Shewanella RepID=A0KT... 78 6e-13 UniRef50_Q39X25 Diguanylate cyclase/phosphodiesterase n=2 Tax=Ge... 78 6e-13 UniRef50_B3PHS3 Sensory box/GGDEF family protein n=1 Tax=Cellvib... 78 6e-13 UniRef50_Q82TH8 Diguanylate cyclase/phosphodiesterase domain 2 (... 77 6e-13 UniRef50_B0UAD7 Diguanylate cyclase/phosphodiesterase with PAS/P... 77 6e-13 UniRef50_Q7NYX4 Putative uncharacterized protein n=1 Tax=Chromob... 77 7e-13 UniRef50_Q1YFA8 Putative diguanylate cyclase (GGDEF)/phosphodies... 77 7e-13 UniRef50_C6P1Q1 Diguanylate cyclase/phosphodiesterase with PAS/P... 77 7e-13 UniRef50_D0YY24 Putative uncharacterized protein n=1 Tax=Photoba... 77 7e-13 UniRef50_B8DLW6 Response regulator receiver modulated diguanylat... 77 7e-13 UniRef50_A6UD61 Diguanylate cyclase/phosphodiesterase with PAS/P... 77 7e-13 UniRef50_C4ZM58 Diguanylate cyclase/phosphodiesterase with PAS/P... 77 7e-13 UniRef50_C5EQT5 RNase II stability modulator n=2 Tax=Clostridial... 77 7e-13 UniRef50_B9MED7 Diguanylate cyclase/phosphodiesterase n=1 Tax=Di... 77 8e-13 UniRef50_C6RJR5 Two-component response regulator n=4 Tax=Acineto... 77 8e-13 UniRef50_B4U5Q0 Diguanylate cyclase/phosphodiesterase with PAS/P... 77 8e-13 UniRef50_Q1K435 Diguanylate cyclase/phosphodiesterase n=1 Tax=De... 77 8e-13 UniRef50_C6XA09 Diguanylate cyclase/phosphodiesterase with extra... 77 8e-13 UniRef50_A1K5K2 Conserved hypothetical signaling protein n=2 Tax... 77 8e-13 >UniRef50_Q9JMT8 Uncharacterized HTH-type transcriptional regulator yuaB n=2 Tax=Gammaproteobacteria RepID=YUAB_ECOLI Length = 353 Score = 721 bits (1860), Expect = 0.0, Method: Compositional matrix adjust. Identities = 353/353 (100%), Positives = 353/353 (100%) Query: 1 MNTIKIKLNLIDYDSIVNIEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIKTVSCQK 60 MNTIKIKLNLIDYDSIVNIEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIKTVSCQK Sbjct: 1 MNTIKIKLNLIDYDSIVNIEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIKTVSCQK 60 Query: 61 MKLYKKLNVKSDLTLWRDVFLRFKAYLQPKNIICDNFNSSVLPVVSSKGESMAHYNIYYQ 120 MKLYKKLNVKSDLTLWRDVFLRFKAYLQPKNIICDNFNSSVLPVVSSKGESMAHYNIYYQ Sbjct: 61 MKLYKKLNVKSDLTLWRDVFLRFKAYLQPKNIICDNFNSSVLPVVSSKGESMAHYNIYYQ 120 Query: 121 PIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINKLFSPIKNN 180 PIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINKLFSPIKNN Sbjct: 121 PIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINKLFSPIKNN 180 Query: 181 LPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSLR 240 LPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSLR Sbjct: 181 LPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSLR 240 Query: 241 RIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSK 300 RIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSK Sbjct: 241 RIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSK 300 Query: 301 QLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLLASLKQV 353 QLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLLASLKQV Sbjct: 301 QLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLLASLKQV 353 >UniRef50_P21514 Cyclic di-GMP phosphodiesterase yahA n=51 Tax=Escherichia RepID=YAHA_ECOLI Length = 362 Score = 181 bits (460), Expect = 3e-44, Method: Compositional matrix adjust. Identities = 101/358 (28%), Positives = 191/358 (53%), Gaps = 12/358 (3%) Query: 1 MNTIKIKLNLIDYDSIVNIEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIKTVSCQK 60 MN+ ++ L ++ + V++ P +SE E LL L++G SV EIS+ RNRS KT+S QK Sbjct: 1 MNSCDFRVFLQEFGTTVHLSLPGSVSEKERLLLKLLMQGMSVTEISQYRNRSAKTISHQK 60 Query: 61 MKLYKKLNVKSDLTLWRDVFLRFKAYL------QPKNIICDN-FNSSVLPVVSSKGESMA 113 +L++KL ++SD+T WRD+F ++ + I DN ++ V P S Sbjct: 61 KQLFEKLGIQSDITFWRDIFFQYNPEIISATGSNSHRYINDNHYHHIVTPEAISLALENH 120 Query: 114 HYNIYYQPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINK- 172 + + QP++ A+ G + GC+V + ++ D I + + + + K Sbjct: 121 EFKPWIQPVFCAQTGVLTGCEVLVRWEHPQTGIIPPDQ-FIPLAESSGLIVIMTRQLMKQ 179 Query: 173 ---LFSPIKNNLPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEEL 229 + P+K+ LP F I IN++ L E+ECL+ + G ++I+LVL+ + + + Sbjct: 180 TADILMPVKHLLPDNFHIGINVSAGCFLAAGFEKECLNLVNKLGNDKIKLVLELTERNPI 239 Query: 230 YIIRRYQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTD 289 + ++ + +N+ +L+DFG GYA +LQ P ++ + K+ + ++ Sbjct: 240 PVTPEARAIFDSLHQHNITFALDDFGTGYATYRYLQAFPVDFIKIDKSFVQMASVDEISG 299 Query: 290 IIATTIIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLL 347 I I++L+++ + ++A+G+ET++QA MI +GV +L+G S P+P + F+ + + Sbjct: 300 HIVDNIVELARKPGLSIVAEGVETQEQADLMIGKGVHFLQGYLYSPPVPGNKFISEWV 357 >UniRef50_C1HI32 Rtn protein n=6 Tax=Escherichia RepID=C1HI32_9ESCH Length = 511 Score = 134 bits (338), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 72/246 (29%), Positives = 130/246 (52%), Gaps = 13/246 (5%) Query: 111 SMAH--YNIYYQPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFG 168 ++AH + Y+QPI +AKN + GC+V I + D + P + Sbjct: 260 ALAHGEFRPYFQPIISAKNHQLTGCEVLIRWHHPVSGIIPPD----QFIPLAESTGLIAP 315 Query: 169 HINKLFSPIKNNL-------PHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVL 221 +L S ++++L P+ F I INI+P L+ +E C+ F+ F +++LVL Sbjct: 316 ITQQLMSQVEHSLNSVAHFLPNQFHIGINISPAHFLSPGLEDSCMKFLSTFPKGKVKLVL 375 Query: 222 QFSTKEELYIIRRYQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHD 281 + + + +L + ++ ++ V +L+DFG GYA S+LQ+ P Y+ L K Sbjct: 376 ELTERNQLSVTAESKALFAKLHQQGVLFALDDFGTGYATHSYLQSFPVDYIKLDKGFVQM 435 Query: 282 IESNSLTDIIATTIIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADA 341 + + ++ I +I+L+++L ID+IA+ IET+ Q +M E+G YL+G + PLPA+ Sbjct: 436 VGVDEISGHIVENVIELARRLGIDIIAEVIETESQELFMTEKGSCYLQGYRYAPPLPAEQ 495 Query: 342 FVRKLL 347 F+ + + Sbjct: 496 FIAEWV 501 >UniRef50_D2TJN3 Putative exported protein n=1 Tax=Citrobacter rodentium ICC168 RepID=D2TJN3_CITRO Length = 513 Score = 112 bits (280), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 62/247 (25%), Positives = 129/247 (52%), Gaps = 5/247 (2%) Query: 108 KGESMAHYNIYYQPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLF 167 +G + + ++YQP++N G + + G + D I N+ K+ L Sbjct: 263 RGIANNEFQVHYQPVFNVGRSACGGAEALLRWPQPHGRFISPDI-FITAAENEGKIVALT 321 Query: 168 GHINKLFSP--IKNNLPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFST 225 H+ L + + +P GF+I++NI PE +++ D + + + ++ L+L+ + Sbjct: 322 RHLFDLIAKDVSRWKVPEGFYISVNIAPEHLISDDFVSDVMALKERLA--KLGLILELTE 379 Query: 226 KEELYIIRRYQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESN 285 + + + + L +R+ V ++++DFG GY LS+LQ +P Y+ + +T + I+++ Sbjct: 380 RSLIAEPAKVSAKLELLRSQQVEIAIDDFGTGYCSLSYLQQLPADYLKIDRTFINTIDTS 439 Query: 286 SLTDIIATTIIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRK 345 I TII LS+ L + V+A+G+ +K Q Y++++GV Y++G + P+ + F+ Sbjct: 440 GSDVPILDTIITLSQNLGLQVVAEGVSSKHQLRYILDQGVNYIQGYLYARPMSSADFMVW 499 Query: 346 LLASLKQ 352 L ++Q Sbjct: 500 LDKDVQQ 506 >UniRef50_A6AP35 Protein rtn n=4 Tax=Vibrionales RepID=A6AP35_VIBHA Length = 506 Score = 107 bits (268), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 62/235 (26%), Positives = 116/235 (49%), Gaps = 11/235 (4%) Query: 118 YYQPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINKLF--- 174 Y QPI N+ N I G ++ + ++ D + P + + ++L Sbjct: 272 YAQPILNSANREIQGIEILLRWQHPVQGTVRPDL----FIPKAERSGLILPITHQLMINT 327 Query: 175 ----SPIKNNLPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELY 230 K+ LP F + +NI+P+ + C FI + ++ + LVL+ + +E L Sbjct: 328 AKEIRLWKDKLPKPFHVGVNISPQHCSKGTLVSACQEFIDIVDSKDVTLVLELTEREALN 387 Query: 231 IIRRYQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDI 290 +I++ ++++DFG G++ L +L+ + Y+ + +T DI +++T Sbjct: 388 YCDLTDEIFTQIKSMGCKIAIDDFGTGHSSLVNLRKVDLDYLKIDQTFVRDIGVDTITGH 447 Query: 291 IATTIIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRK 345 + +I LS L +DV+A+G+ET+ QA Y+ ERGV YL+G + P+P F+ K Sbjct: 448 LLQNMITLSHDLSLDVVAEGVETEFQAEYLKERGVSYLQGFLFAKPMPLKEFLSK 502 >UniRef50_Q2L0M3 Putative signaling protein (Fragment) n=1 Tax=Bordetella avium 197N RepID=Q2L0M3_BORA1 Length = 519 Score = 107 bits (267), Expect = 7e-22, Method: Compositional matrix adjust. Identities = 59/234 (25%), Positives = 116/234 (49%), Gaps = 5/234 (2%) Query: 113 AHYNIYYQPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVS---YLFGH 169 +++ YQPIY++K+G G + + ++ A + + V + G Sbjct: 278 GEFHMEYQPIYSSKSGRCEGAEALMRWRHPGAGAISPEVFIAAAEAEGAIVPLTRHALGL 337 Query: 170 INKLFSPIKNNLPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEEL 229 I + + NLP GF +++N+ E +L + + F LVL+ + + + Sbjct: 338 IAQDLP--QMNLPAGFHLSVNLAAEHLLHREFVSDVAAFAARIAPWSPHLVLELTERSLV 395 Query: 230 YIIRRYQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTD 289 + S++R +R + V ++++DFG GY L++LQ P Y+ + KT IE+ Sbjct: 396 EDAAQALSNIRAVRTSGVSIAIDDFGSGYCSLAYLQQFPVDYLKVDKTFIVGIENAQQES 455 Query: 290 IIATTIIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFV 343 I I+ L+++L ++V+A+G+ T+ Q Y++ R V Y++G ++ P+ A F Sbjct: 456 PILDMILALARRLELEVVAEGVSTRGQLDYLLARDVAYVQGFLVAEPMRAQVFA 509 >UniRef50_B6ICR3 Putative uncharacterized protein n=1 Tax=Escherichia coli SE11 RepID=B6ICR3_ECOSE Length = 272 Score = 105 bits (262), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 56/165 (33%), Positives = 92/165 (55%) Query: 181 LPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSLR 240 LP+GF I +NI+ DI + E +C+ F++ F +IRLVL+ + + + Sbjct: 97 LPNGFCIGVNISVADIFNPNFENDCISFLRKFSPRKIRLVLELTERYPYPLNDNVLRKFE 156 Query: 241 RIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSK 300 R++ V L+++DFG YA S++ IP V + H + +N ++ I I+ L+K Sbjct: 157 RLKQIGVELAIDDFGTRYATHSYVMCIPVDQVKIPGFFIHQLHTNKKSEKIIDNILSLAK 216 Query: 301 QLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRK 345 ++ IDVIA+GIET+ Q M + V L+G S P+P + FV+K Sbjct: 217 EIGIDVIAEGIETEAQEIIMASKNVNLLQGYLYSPPIPPEIFVQK 261 >UniRef50_B4T8H8 Cyclic diguanylate phosphodiesterase (EAL) domain protein n=39 Tax=Enterobacteriaceae RepID=B4T8H8_SALHS Length = 516 Score = 104 bits (259), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 62/248 (25%), Positives = 128/248 (51%), Gaps = 5/248 (2%) Query: 107 SKGESMAHYNIYYQPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYL 166 ++G + + ++YQP++N ++G+ G + + DG F I N+ + L Sbjct: 254 ARGITHNEFTVHYQPVFNVEDGSCGGVEALMRWPQPDGR-FITPDIFITAAENEGMIIPL 312 Query: 167 FGHINKLFS--PIKNNLPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFS 224 H+ +L + I + F+I++NI+P ++ ++ GT I L+L+ + Sbjct: 313 SRHLFELIAHDVINWTVSDDFYISVNISPAHLMDDGFIQDIEALRTRLGT--ITLMLELT 370 Query: 225 TKEELYIIRRYQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIES 284 + + + L +R V ++++DFG GY LS+LQ +P + + +T I++ Sbjct: 371 ERSLIVEPSQVAEKLSTLREKGVLIAIDDFGTGYCSLSYLQQLPVDSLKIDRTFIDTIDT 430 Query: 285 NSLTDIIATTIIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVR 344 +S + TII LS++L ++V+A+G+ T+ Q Y++ GV +++G + P+ A+ F+ Sbjct: 431 SSDDVPVLDTIITLSQRLGLNVVAEGVSTQHQLRYILSHGVGFVQGFLYARPMGANDFMS 490 Query: 345 KLLASLKQ 352 L S ++ Sbjct: 491 WLGKSAQR 498 >UniRef50_Q7BQS9 Sea19 n=1 Tax=Serratia entomophila RepID=Q7BQS9_9ENTR Length = 408 Score = 103 bits (258), Expect = 8e-21, Method: Compositional matrix adjust. Identities = 64/241 (26%), Positives = 116/241 (48%), Gaps = 13/241 (5%) Query: 118 YYQPIYNAKNGNIAGCDVTI--------ALKNSDGSAFALDSDRINYNPNDNKVSYLFGH 169 Y+QPI +G + G +V + L ++ A A +S I D L Sbjct: 171 YFQPIVRGGSGELTGAEVLVRWQHPKMGVLSPANFIALAEESGLIVPMTRD-----LMAQ 225 Query: 170 INKLFSPIKNNLPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEEL 229 + + FSP+ N LP F NI+ ++ +C F+K FG R++LVL+ + ++ L Sbjct: 226 VRECFSPLANRLPGDFHFGFNISAYHFNDINLIDDCRDFLKAFGLHRVKLVLELTERQVL 285 Query: 230 YIIRRYQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTD 289 ++ + V ++L+DFG GY+ LS+LQ+ + + + I +++L+ Sbjct: 286 VSNELTIHIIQSLHQLGVLIALDDFGTGYSSLSYLQDHQIDILKIDRRFISQIGADTLSC 345 Query: 290 IIATTIIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLLAS 349 I ++ L++ L I +A+G+ET+ Q Y+ +R +L+G P D F+ + L Sbjct: 346 HIVDHLLSLAECLDITTVAEGVETEAQRAYLCQRQSVHLQGYLFGRPESQDLFLHQWLGG 405 Query: 350 L 350 L Sbjct: 406 L 406 >UniRef50_D0GSB3 Rtn protein n=6 Tax=Vibrio RepID=D0GSB3_VIBMI Length = 528 Score = 103 bits (257), Expect = 9e-21, Method: Compositional matrix adjust. Identities = 50/185 (27%), Positives = 102/185 (55%), Gaps = 1/185 (0%) Query: 163 VSYLFGHINKLFSPIKNNLPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQ 222 S + + P ++ +P F I+ NI+ + + D+ ++C HF+ F + L L+ Sbjct: 318 TSQVMAKVRDQLGPYQSKIPSDFHISFNISAKHCVNSDLVKDCQHFLSAFNHPSL-LSLE 376 Query: 223 FSTKEELYIIRRYQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDI 282 + +E + + ++ V L+++DFG G++ L++LQ F + + ++ I Sbjct: 377 LTERELIEDTEEARKLFAKLNQIGVRLAIDDFGTGHSSLNYLQTFQFDVLKIDQSFVRMI 436 Query: 283 ESNSLTDIIATTIIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAF 342 SN++ I T+++L+++L++ +A+GIET++Q Y RGV Y++G +SP+P D F Sbjct: 437 GSNAVASHIVDTLLNLAQRLNMQTVAEGIETEEQVTYFAARGVDYMQGYFYASPMPMDDF 496 Query: 343 VRKLL 347 + L+ Sbjct: 497 LTHLV 501 >UniRef50_A0KH05 EAL domain protein n=1 Tax=Aeromonas hydrophila subsp. hydrophila ATCC 7966 RepID=A0KH05_AERHH Length = 513 Score = 102 bits (253), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 62/236 (26%), Positives = 111/236 (47%), Gaps = 11/236 (4%) Query: 118 YYQPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNK-------VSYLFGHI 170 Y QPI ++NG + GC+V + ++ D + P + L + Sbjct: 276 YLQPIVVSQNGQLHGCEVLMRWQHHRQGLIRPDL----FIPLAEESGLIILMTQTLMQQV 331 Query: 171 NKLFSPIKNNLPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELY 230 F+P LP F + NI + +C F+ F I LVL+ + +E + Sbjct: 332 RLQFAPHAAALPPRFHFSFNICARHCQQLSLLDDCRSFLAAFTANPITLVLELTERELIT 391 Query: 231 IIRRYQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDI 290 + +R V + L+DFG G++ L++LQ Y+ + ++ I +N+L+ Sbjct: 392 PNHLTERLFEELRQMGVRIGLDDFGTGHSSLTYLQQFHVDYLKIDQSFVAMIGTNALSRH 451 Query: 291 IATTIIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKL 346 I + I L+ +L + IA+G+ET++QA +++ER V YL+G PL F+++L Sbjct: 452 ILDSTISLATRLGLQTIAEGVETQEQADFLVERQVDYLQGYLYGRPLTPQQFLQQL 507 >UniRef50_A4SI84 EAL domain protein n=3 Tax=Gammaproteobacteria RepID=A4SI84_AERS4 Length = 527 Score = 102 bits (253), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 60/239 (25%), Positives = 115/239 (48%), Gaps = 11/239 (4%) Query: 115 YNIYYQPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNK-------VSYLF 167 + Y QP+ + + G +V + ++ + D + P + + + Sbjct: 274 FEPYLQPLVTTSDTRLMGVEVLMRWQHPNSGLIRPDL----FIPQAEESGLIVPMTTLIM 329 Query: 168 GHINKLFSPIKNNLPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKE 227 + ++ S + LP GF I+ NI+ + +EC F+ F +I LVL+ + +E Sbjct: 330 KKVAQVLSREQARLPDGFHISFNISAAHCRDLALLQECRTFLAQFAPGKIVLVLELTERE 389 Query: 228 ELYIIRRYQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSL 287 L + S R++ V L+++DFG G++ L +LQ Y+ + ++ I + SL Sbjct: 390 LLVVDPNTLSLFRQLDQMGVKLAIDDFGTGHSSLFYLQQFHVDYLKIDQSFIGRIGTESL 449 Query: 288 TDIIATTIIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKL 346 ++ I +IDL +L + +IA+G+E++ QA Y+ +GV Y++G P+P F L Sbjct: 450 SEHIVANVIDLGARLGLLLIAEGVESELQAAYLRAKGVDYMQGYLFGRPMPLQHFCDDL 508 >UniRef50_B5XY29 Cyclic diguanylate phosphodiesterase (EAL) domain protein n=12 Tax=Enterobacteriaceae RepID=B5XY29_KLEP3 Length = 511 Score = 101 bits (251), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 61/239 (25%), Positives = 117/239 (48%), Gaps = 7/239 (2%) Query: 118 YYQPIYNAKNGNIAGCDVTIALKNS-----DGSAFALDSDRINYNPNDNKVSYLFGHINK 172 +YQP+ N K G I G ++ KN+ + F ++R + L + Sbjct: 269 FYQPVVNGKTGEIYGVEILARWKNATTQRRSPAEFIPLAERTGLIIPLTRS--LMAQVAA 326 Query: 173 LFSPIKNNLPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYII 232 +PI + LP GF I +NI+ I +CLH+ + F + ++L+L+ + +E L + Sbjct: 327 QMNPIFSKLPDGFHIGLNISVSHINAPSFIDDCLHYQRGFEGKAVKLMLEITEQEPLLLN 386 Query: 233 RRYQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIA 292 L + + ++L+DFG GY+ LS L + F Y+ + ++ + + + + Sbjct: 387 DAVVDKLNTLHSRGFSIALDDFGTGYSGLSCLHELVFDYIKIDQSFVGRVTGEAPSSKLL 446 Query: 293 TTIIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLLASLK 351 +I++++ L + +IA+G+ET+ Q Y+ + + L+G P+P A V LL+ K Sbjct: 447 DCVIEMARTLSLRIIAEGVETQVQLEYLNRQNIHLLQGYYFWKPMPYVALVMLLLSKPK 505 >UniRef50_Q2KYK4 Putative signaling protein (Fragment) n=3 Tax=Bordetella RepID=Q2KYK4_BORA1 Length = 454 Score = 100 bits (249), Expect = 7e-20, Method: Compositional matrix adjust. Identities = 59/249 (23%), Positives = 124/249 (49%), Gaps = 6/249 (2%) Query: 105 VSSKGESMAHYNIYYQPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVS 164 V+ SM ++I+YQP+++ GNI GC+ + + + + I + Sbjct: 210 VALASSSMDQFDIHYQPVFDTNTGNIEGCEALLRWHHPVHGNVS-PATAIELAERTGLIV 268 Query: 165 YLFGHINKLFSPIKNNLPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFS 224 L + P + + +N++ + ++ + H + RLVL+ + Sbjct: 269 ALGAWVLDTACARAVTWPEHWRLHVNLSVRQMYAEELSMQVAHTLANTRLAPHRLVLEIT 328 Query: 225 TKEELYIIR--RYQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDI 282 E ++I++ R+ ++L +R V ++L+DFG+GY+ L+HL+ +P +V + + ++ Sbjct: 329 --ESVFILQYERHVATLNGLRARGVQVALDDFGVGYSSLTHLRRLPIDWVKVDRGFIAEL 386 Query: 283 ESNSLTDIIATTIIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAF 342 ES+ ++ + + ++ + L + V+A+GIET Q + G +Y++G L P+PA Sbjct: 387 ESDPVSQEVVSALMGMCHALGLMVVAEGIETVAQRDILNRLGCRYMQGFLLGRPVPAQE- 445 Query: 343 VRKLLASLK 351 +R L AS+ Sbjct: 446 IRLLAASVS 454 >UniRef50_B2VJL5 Putative uncharacterized protein rtn n=1 Tax=Erwinia tasmaniensis RepID=B2VJL5_ERWT9 Length = 523 Score = 100 bits (249), Expect = 8e-20, Method: Compositional matrix adjust. Identities = 71/276 (25%), Positives = 129/276 (46%), Gaps = 9/276 (3%) Query: 76 WRDVFLRFKAYLQPKNIICDNFNSSVLPVVSS------KGESMAHYNIYYQPIYNAKNGN 129 WR V L F +++ +S L SS +G + ++++YQP+ N NG Sbjct: 235 WRQVLLTFMPMAVILSVLFVAVTNSWLRRRSSYRDELRRGMAFGEFSVHYQPVCNLVNGQ 294 Query: 130 IAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINKLFSP--IKNNLPHGFFI 187 +AG + + + SDGS D I + + L H+ +L + +P GF I Sbjct: 295 LAGVEALMRWQRSDGSWVRPDI-FIAAAEAEGMIVQLTRHLLQLIAKDCASWKVPAGFHI 353 Query: 188 TININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSLRRIRNNNV 247 IN+ + + D ++ F + + L+ + + + L +R+ + Sbjct: 354 GINVAADHLQHEDFVKDIRGFSQNIAHLLPTITLELTERSLISEGDLVAHRLAELRSEGI 413 Query: 248 YLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSKQLHIDVI 307 ++++DFG G+ L++LQ P Y+ + K+ + IES I TII L+ +L + V+ Sbjct: 414 RVAIDDFGTGHCSLTYLQTFPLDYLKIDKSFVNAIESADGETPILDTIIQLAHRLALQVV 473 Query: 308 ADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFV 343 A+GIET Q Y+ GV +++G + PL + A + Sbjct: 474 AEGIETPLQMEYLKNHGVVFIQGFYYARPLSSAALM 509 >UniRef50_P75995 Uncharacterized protein ycgG n=33 Tax=Enterobacteriaceae RepID=YCGG_ECOLI Length = 507 Score = 99.4 bits (246), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 60/241 (24%), Positives = 115/241 (47%), Gaps = 11/241 (4%) Query: 118 YYQPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNK-------VSYLFGHI 170 +YQP+ N + G + G +V K G + + + P K L + Sbjct: 265 FYQPVVNGREGTLRGVEVLARWKQPHGGYISPAA----FIPLAEKSGLIVPLTQSLMNQV 320 Query: 171 NKLFSPIKNNLPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELY 230 + + I + LP GF I IN + I++ ECL+F F + LVL+ + +E L Sbjct: 321 ARQMNAIASKLPEGFHIGINFSASHIISPTFVDECLNFRDSFTRRDLNLVLEVTEREPLN 380 Query: 231 IIRRYQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDI 290 + L + N ++L+DFG GY+ LS+L ++ Y+ + + + ++ + Sbjct: 381 VDESLVQRLNILHENGFVIALDDFGTGYSGLSYLHDLHIDYIKIDHSFVGRVNADPESTR 440 Query: 291 IATTIIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLLASL 350 I ++DL+++L I ++A+G+ETK+Q Y+ + + + +G P+ V+ +L+ Sbjct: 441 ILDCVLDLARKLSISIVAEGVETKEQLDYLNQNYITFQQGYYFYKPVTYIDLVKIILSKP 500 Query: 351 K 351 K Sbjct: 501 K 501 >UniRef50_C9PEG9 Rtn protein n=1 Tax=Vibrio furnissii CIP 102972 RepID=C9PEG9_VIBFU Length = 511 Score = 99.0 bits (245), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 56/245 (22%), Positives = 119/245 (48%), Gaps = 12/245 (4%) Query: 107 SKGESMAHYNIYYQPIYNAKNGNIAGCDVTIALKNSDGSAFA-------LDSDRINYNPN 159 ++G + + Y QPI++ G++ G ++ + + L+ +++ Sbjct: 253 ARGLAHQQFKPYIQPIFDC-GGSLVGGEILVRWHHPTRGVIGPYEFISILERGGLSHRLT 311 Query: 160 DNKVSYLFGHINKLFSPIKNNLPHGFFITININPEDILTCDIERECLHFIKVFGTERIRL 219 ++ L +P LP GF ++ NI+ E + I + C F +V T ++L Sbjct: 312 ES----LMEQTALQLAPYTKALPDGFHLSFNISAEQLTDSKIVQCCHRFRQVVDTHHMQL 367 Query: 220 VLQFSTKEELYIIRRYQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMF 279 +L+ + +E+ + + ++ NV +S++DFG G++ L + Q Y+ + K+ Sbjct: 368 ILELTEREQAIEAVELMDTYQALKAENVLISIDDFGTGHSSLIYFQMFKADYLKIDKSFV 427 Query: 280 HDIESNSLTDIIATTIIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPA 339 I N L++ I ++DL+++L+I +A+G+E +Q Y+ GV + +G S+P+ Sbjct: 428 DLIGENELSNHIVNNVLDLARRLNIPTVAEGVERPEQLQYLTVHGVDFFQGYLFSTPITL 487 Query: 340 DAFVR 344 D F+ Sbjct: 488 DDFIE 492 >UniRef50_C6C3R8 Diguanylate phosphodiesterase n=1 Tax=Dickeya dadantii Ech703 RepID=C6C3R8_DICDC Length = 500 Score = 98.6 bits (244), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 65/248 (26%), Positives = 123/248 (49%), Gaps = 21/248 (8%) Query: 103 PVVSSKGESMAHYNIYYQPIYNAKNGNIAGCDVTIALKNSDGSAFALDS---DRINYNPN 159 PV+S++ + + + + Y+ K G I+ DV I L G L +R+ Sbjct: 268 PVISTQSRELYGFEVLAR-WYHPKTGFISP-DVFIPLSEQSGLIIPLTRLLMERV----- 320 Query: 160 DNKVSYLFGHINKLFSPIKNNLPHGFFITININPEDILTCDIERECLHFIKVFGTERIRL 219 IN L S ++ LP I INI+ + +C +FI GT +IRL Sbjct: 321 ----------INDLIS-CQDILPEDLHIGINISAKHCQYEGFIDDCKYFIDALGTRKIRL 369 Query: 220 VLQFSTKEELYIIRRYQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMF 279 +++ + +E++ I + ++ + ++L+DFG GY+ +L+ + + + ++ Sbjct: 370 MVEITEREKIEITPTTLRFFQNLKAAGILIALDDFGTGYSNFDYLRQLQADLIKIDQSFI 429 Query: 280 HDIESNSLTDIIATTIIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPA 339 I+ NS + + +IDL++ +++ IA+G+ET+ QA ++ E+ + YL+G S PLP Sbjct: 430 SMIDENSQSTPLVNCVIDLAQNMNLKTIAEGVETEFQAEFLSEKNIDYLQGYLFSRPLPF 489 Query: 340 DAFVRKLL 347 D V+ L Sbjct: 490 DECVKTWL 497 >UniRef50_Q1LGY0 EAL-containing signal transduction protein n=2 Tax=cellular organisms RepID=Q1LGY0_RALME Length = 536 Score = 97.8 bits (242), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 60/232 (25%), Positives = 114/232 (49%), Gaps = 9/232 (3%) Query: 116 NIYYQPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINKLFS 175 ++ Y PI ++G G + + + DG A D I +++ L + L Sbjct: 290 SLAYMPIVELESGKWIGAEALMRWCH-DGQWIAPDK-FIPLAERHHRIRKLTNRMLDLLV 347 Query: 176 PIKNNLPH----GFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYI 231 LP + ++N++ ED+ C I + + G + V+ +T+ L Sbjct: 348 ADAQALPRDLARAMYFSVNLSAEDLAACAIAQRVADVRQACGVDG---VMVEATEGVLLE 404 Query: 232 IRRYQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDII 291 R ++ R+R + ++++DFG GY+ LS+L ++ Y+ + K+ I +NS+ + Sbjct: 405 ASRVIPNIERLRKLGIRVAIDDFGTGYSSLSYLGSLDVDYIKIDKSFVSAIGTNSVRGHV 464 Query: 292 ATTIIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFV 343 IID++K + + VIA+G+ET++QA Y++ RGV+Y +G +P FV Sbjct: 465 VAHIIDMAKDVGVAVIAEGVETQEQADYLMARGVRYAQGWLFGKAMPMQDFV 516 >UniRef50_D2TJM6 Putative uncharacterized protein n=1 Tax=Citrobacter rodentium ICC168 RepID=D2TJM6_CITRO Length = 499 Score = 97.4 bits (241), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 60/231 (25%), Positives = 111/231 (48%), Gaps = 8/231 (3%) Query: 118 YYQPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDR-----INYNPNDNKVSYLFGHINK 172 YYQPI N + G + C V I + G +A+ IN +YL + K Sbjct: 252 YYQPILNVQ-GEV--CGVEILARWPQGHHYAISQREFIPLAINSGLMCELTNYLMTRVAK 308 Query: 173 LFSPIKNNLPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYII 232 F ++ N F++ NI P + I +CLHF+++ I+L+++ + + L Sbjct: 309 DFQSVQFNSNDALFVSFNIGPAGLRNPVIYWQCLHFMELTQELPIKLMIEITEDQALNFT 368 Query: 233 RRYQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIA 292 + +R +RN V +L+DFG GYA L++L + + + KT + I+ + + Sbjct: 369 PAIKELIRSLRNRGVLFALDDFGTGYANLNYLHELELDMIKIDKTFINVIKDSETPVPML 428 Query: 293 TTIIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFV 343 +II L+ L + +A+G+E Q ++++ + +L+G P+P F+ Sbjct: 429 ESIIHLANILGLRTVAEGVEHACQQQWLVKNNIHFLQGYYFLPPVPFADFM 479 >UniRef50_C5BG29 Cyclic diguanylate phosphodiesterase (EAL) n=2 Tax=Edwardsiella RepID=C5BG29_EDWI9 Length = 514 Score = 96.7 bits (239), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 61/241 (25%), Positives = 114/241 (47%), Gaps = 13/241 (5%) Query: 118 YYQPIYNAKNGNIAGCDVTIALKNSDGS--------AFALDSDRINYNPNDNKVSYLFGH 169 Y QP+ + + +++GC++ + ++ A DS I D + Sbjct: 278 YIQPVVDGADESLSGCEILMRWQHPQMGLIPPNNFIPLAEDSGLIVAMTRD-----IMRQ 332 Query: 170 INKLFSPIKNNLPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEEL 229 ++ F+P +LP F NI+ + EC FI F IRLVL+ + ++ + Sbjct: 333 VSDYFAPRCRSLPTHFHFGFNISASHFNDLSLVEECRRFIDAFEANPIRLVLELTERQRV 392 Query: 230 YIIRRYQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTD 289 + ++R V L+L+DFG G++ L++LQ F + + ++ I S+ L+ Sbjct: 393 PDGELTEQIFHKLRGLGVLLALDDFGTGHSSLAYLQRYHFDIIKIDRSFVRMIGSDMLSG 452 Query: 290 IIATTIIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLLAS 349 I T+I L+K+L + +A+G+E+ +Q ++ + YL+G P P F R+ L S Sbjct: 453 HIVDTVIALAKRLDMITLAEGVESGEQLQHLRGYRLDYLQGYLFGCPQPLPDFTREWLKS 512 Query: 350 L 350 + Sbjct: 513 V 513 >UniRef50_B1M4V3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Rhizobiales RepID=B1M4V3_METRJ Length = 777 Score = 96.3 bits (238), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 59/227 (25%), Positives = 102/227 (44%), Gaps = 1/227 (0%) Query: 114 HYNIYYQPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINKL 173 + +Y+QPI AK + G + I K+ F + I + L I + Sbjct: 533 EFVLYFQPIVAAKECRVRGFEALIRWKHPV-RGFVSPGEFIPLAEETGVIIPLGEWILRE 591 Query: 174 FSPIKNNLPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIR 233 I P I +N++P D+ + ++ G RL L+ + L Sbjct: 592 ACRIAAGWPGDVRIAVNLSPRQFRHSDLTQLVRSALRTSGLAAARLELEVTESVFLEATP 651 Query: 234 RYQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIAT 293 ++L ++R V LSL+DFG GY+ LS+L+ I F + + ++ D+ I + Sbjct: 652 AINATLSKLREMGVRLSLDDFGTGYSSLSYLRRIAFDKIKIDQSFVRDLPQERGAAAIVS 711 Query: 294 TIIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPAD 340 IID++ L + + A+G+ET Q ++E+G +G S PLPA+ Sbjct: 712 AIIDMATSLDMTITAEGVETDAQRACLLEQGCHEFQGYLFSKPLPAE 758 >UniRef50_A0KNV8 Rtn protein n=9 Tax=Gammaproteobacteria RepID=A0KNV8_AERHH Length = 510 Score = 95.9 bits (237), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 55/231 (23%), Positives = 110/231 (47%), Gaps = 7/231 (3%) Query: 118 YYQPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKV-----SYLFGHINK 172 Y QP+ + + +GC+V + ++ + DR D+ + L + + Sbjct: 276 YLQPVVTGDDAHWSGCEVLMRWQHPRQGL--ISPDRFIPLAEDSGLIVPMTRLLMEQVRE 333 Query: 173 LFSPIKNNLPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYII 232 F+ ++LP GF NI+ + +C FI F I+LVL+ + +E + Sbjct: 334 QFAGRVHSLPRGFHFGFNISASHCKDMSLLEDCRDFINAFRENPIKLVLELTERELIVAD 393 Query: 233 RRYQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIA 292 + V+++++DFG G++ L++LQ ++ + ++ I S++L+ I Sbjct: 394 ETTDRLFAELHQLGVFIAIDDFGTGHSSLTYLQQFQVDFLKIDQSFVGMIGSDALSSHIV 453 Query: 293 TTIIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFV 343 +IDL+ +L + ++A+G+E + QA Y+ R V +L+G P+P F Sbjct: 454 ENVIDLATRLGLLLVAEGVENEVQAAYLRARQVNFLQGYLYGRPMPMKEFA 504 >UniRef50_P76446 Protein rtn n=101 Tax=Enterobacteriaceae RepID=RTN_ECOLI Length = 518 Score = 94.7 bits (234), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 53/239 (22%), Positives = 124/239 (51%), Gaps = 10/239 (4%) Query: 114 HYNIYYQPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINKL 173 + + YQP+ + + + G +V + ++ D+ IN+ + + L H+ +L Sbjct: 276 QFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDA-FINFAESQKMIVPLTQHLFEL 334 Query: 174 FS----PIKNNLPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEEL 229 + ++ LP G INI P+ + + + + + ++VL+ + ++ Sbjct: 335 IARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLEITERD-- 392 Query: 230 YIIRRYQSS--LRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSL 287 +++ +++ + + V ++++DFG G++ L +L+ Y+ + + + I + ++ Sbjct: 393 -MLKEQEATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAIGTETI 451 Query: 288 TDIIATTIIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKL 346 T + ++ L+K+L++ +A+G+ET +QA ++ ERGV +++G +S PLP D FVR L Sbjct: 452 TSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDDFVRWL 510 >UniRef50_UPI0001826354 diguanylate phosphodiesterase n=1 Tax=Enterobacter cancerogenus ATCC 35316 RepID=UPI0001826354 Length = 280 Score = 94.4 bits (233), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 57/229 (24%), Positives = 114/229 (49%), Gaps = 6/229 (2%) Query: 119 YQPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPND---NKVSYLFGH-INKLF 174 YQP ++++ GNIAG +V K+ A D +D YL I +L Sbjct: 44 YQPFFDSQTGNIAGVEVLARWKHPLYGNVAPDIFIPLAEEHDLIAPLTHYLIQQVIAELR 103 Query: 175 SPIKNNLPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRR 234 PI P G +I++N++P + L + + L + ++++V++ + + L+ + Sbjct: 104 QPIPL-FPEGLYISLNLSPHNCLDPHFKTDSLDLLNALAASQVQVVVEITERHPLHFTPQ 162 Query: 235 YQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATT 294 +R + + ++L+DFG GY+ LS++ + ++ + K + N T ++ + Sbjct: 163 LSEWFATLRQSRIAIALDDFGTGYSNLSYIHALQPEFIKIDKLFVGQVRENGDTRLL-DS 221 Query: 295 IIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFV 343 +I+L+K + + +IA+G+ET+ QA Y+ + YL+G P+ D V Sbjct: 222 LINLAKNMDLRIIAEGVETQAQADYLRVKNCDYLQGYYFCKPVQIDELV 270 >UniRef50_Q1VEI6 Putative uncharacterized protein n=1 Tax=Vibrio alginolyticus 12G01 RepID=Q1VEI6_VIBAL Length = 511 Score = 94.0 bits (232), Expect = 7e-18, Method: Compositional matrix adjust. Identities = 44/167 (26%), Positives = 92/167 (55%) Query: 179 NNLPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSS 238 ++L F + +NI+P+ + EC FI+ E I LVL+ + +E L + Sbjct: 338 SHLTKPFHVGVNISPQHCRGMGLANECKEFIQTVNQENIMLVLELTEREVLDFSESTEVL 397 Query: 239 LRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDL 298 ++ ++++DFG G++ L++LQ +Y+ + + + SN + + + I+L Sbjct: 398 FSDLKKLGCKIAIDDFGTGHSSLANLQKFQVNYIKIDQMFVQGVGSNPTSRHLVESTIEL 457 Query: 299 SKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRK 345 + +L ++++A+G+ET++Q Y+ VKYL+G S P+P + F+++ Sbjct: 458 ANRLSLEIVAEGVETEEQQEYLANYHVKYLQGFLFSKPIPLEEFLQE 504 >UniRef50_B4TLS8 Cyclic diguanylate phosphodiesterase (EAL) domain n=1 Tax=Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188 RepID=B4TLS8_SALET Length = 287 Score = 93.6 bits (231), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 57/236 (24%), Positives = 113/236 (47%), Gaps = 6/236 (2%) Query: 118 YYQPIYNAKNGNIAGCDVTIALKNSDG----SAFALDSDRINYNPNDNKVSYLFGHINKL 173 ++QPI +KN I GC+V + G S F +++ Y + L + Sbjct: 51 WFQPIVCSKNAKIVGCEVLARWERPGGVILPSEFIPSTEK--YRLTTPLIIQLMHKTGYM 108 Query: 174 FSPIKNNLPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIR 233 + ++N LP GF +N+ DI D E + + + L+++ + + Sbjct: 109 VNKMRNILPEGFHFGVNVCAMDITNPDFVCESIKLNNILKKRGVGLIIEITERTPFSEHY 168 Query: 234 RYQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIAT 293 ++L +R+ + ++L+DF G++ ++Q ++ + K+ H + ++ I Sbjct: 169 ETVATLSYLRDAGMLIALDDFCTGHSSFKYIQQFAVDFLKIDKSFTHKYIKDDISRAIVN 228 Query: 294 TIIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLLAS 349 II L+ +L+I +IA+GIET++QA M ++GV Y +G S P+ + F+ + S Sbjct: 229 CIIGLAHKLNIKLIAEGIETERQAMEMTKQGVHYQQGYLYSFPVSEEHFMSEKFIS 284 >UniRef50_B9QXK7 Cyclic diguanylate phosphodiesterase domain protein n=1 Tax=Labrenzia alexandrii DFL-11 RepID=B9QXK7_9RHOB Length = 757 Score = 92.0 bits (227), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 67/238 (28%), Positives = 113/238 (47%), Gaps = 27/238 (11%) Query: 115 YNIYYQPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDN-KVSYLFGHINK- 172 +++ YQP+ G G + + K DG+ N +P + ++ G I + Sbjct: 518 FSLNYQPVVQMPEGRATGYEALLRWKCPDGT---------NVSPAEFIPIAESLGLIREI 568 Query: 173 ----LFSPIKNNL--PHGFFITININPEDILTCDIER--ECLHFIKVFGTERIRLVLQFS 224 L + IK L P + +N++P I T + E L F ER+ L +F+ Sbjct: 569 GAWVLKTAIKEALTWPGELRVAVNVSPHQIGTGHLASYVEMLLRESAFPAERLEL--EFT 626 Query: 225 TKEELYIIRRYQSSLR---RIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHD 281 E +R S+L RIR + L L+DFG+GY+ LS+L F + L ++ D Sbjct: 627 ---ETVFMRSDHSTLEELARIRAMGIRLVLDDFGIGYSSLSYLDKFSFDKMKLDRSFVTD 683 Query: 282 IESNSLTDIIATTIIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPA 339 + N I +++DL+ +L ID++A+G+ET K ++ GVK +G + P+PA Sbjct: 684 VTLNPTRAAIVASVVDLAARLDIDLVAEGVETLKDLHFLTGTGVKLGQGFYFARPMPA 741 >UniRef50_A6V3S1 Aminoglycoside response regulator n=3 Tax=Proteobacteria RepID=A6V3S1_PSEA7 Length = 526 Score = 92.0 bits (227), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 56/228 (24%), Positives = 112/228 (49%), Gaps = 3/228 (1%) Query: 114 HYNIYYQPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINKL 173 +++ YQPI G G + + + D S D + ++ + L HI L Sbjct: 278 EFHMVYQPIIRLDTGECRGVEALVRWRRPDNSQVRPDI-FVPLAEDNGMIGDLTRHIFGL 336 Query: 174 FSP--IKNNLPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYI 231 + + L G + +N++ + + + G++ +LVL+ + +E L Sbjct: 337 VAADLAQLGLGAGDHLGVNVSGSHLAGQGFVDDVRRLLGAIGSDGPQLVLEVTEREALPR 396 Query: 232 IRRYQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDII 291 + Q ++R++R V +L+DFG G + LS+LQ + ++ + ++ + + S+ ++ Sbjct: 397 DAQAQRNIRQLRELGVQWALDDFGTGQSSLSYLQQLHADFLKVDRSFVSGVGTESVNAVV 456 Query: 292 ATTIIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPA 339 TII L+++L +DV A+GIET++Q Y+ V++ +G S PL A Sbjct: 457 LETIIGLAQRLDLDVTAEGIETREQEQYLCGHSVQWGQGYLFSPPLTA 504 >UniRef50_C9PD80 Rtn protein n=2 Tax=Vibrio RepID=C9PD80_VIBFU Length = 501 Score = 92.0 bits (227), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 65/239 (27%), Positives = 113/239 (47%), Gaps = 19/239 (7%) Query: 108 KGESMAHYNIYYQPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLF 167 KG + YQP+ ++ I G + + N D N+ P ++ F Sbjct: 248 KGLERRELFMAYQPVVRSEPCEIKGFEALVRWVNPKLGFVGPD----NFIP----IAEEF 299 Query: 168 GHINKLFSPI---------KNNLPHGFFITININPEDILTCDIERECLHFIKVFGTERIR 218 G INKL + K L + +NI P +L + + K + ++ Sbjct: 300 GLINKLTDYVLDSVLRDWSKAKLMECHHMGVNIPPSYLLDPVCVEKLKQYAKAYKDINLQ 359 Query: 219 LVLQFSTKEELYIIRRYQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTM 278 L+ + + ++ L + Q L +RN+ + ++++DFG G LS LQNI F ++ + K Sbjct: 360 LIAEITERQLLD--EQGQQVLHELRNSGILVAIDDFGTGRTALSVLQNIEFDFLKIDKCF 417 Query: 279 FHDIESNSLTDIIATTIIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPL 337 I S+ + IIDLS QL ++++A+G+ETK Q+ Y+ E+GV+Y +G + PL Sbjct: 418 VDTIGVESVNAPVLNAIIDLSHQLQVEIVAEGVETKVQSCYLKEKGVQYQQGYYYAKPL 476 >UniRef50_C6CFE9 Diguanylate phosphodiesterase n=2 Tax=Dickeya RepID=C6CFE9_DICZE Length = 501 Score = 91.7 bits (226), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 56/235 (23%), Positives = 115/235 (48%), Gaps = 6/235 (2%) Query: 118 YYQPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKV----SYLFGHINKL 173 YYQP+ + + I G +V +A + S F I + L + + Sbjct: 265 YYQPVISTVSREIYGVEV-LARWHHPKSGFISPDIFIPLCEQSGLIIPMTRSLMSSVVRD 323 Query: 174 FSPIKNNLPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIR 233 +P N LP I INI+ + + D +C +FI FG + + L+++ + +E++ I Sbjct: 324 LTPHLNTLPDNLHIAINISAQHCQSDDFITDCQNFIAAFGDKNVHLMIEITEREKVDITP 383 Query: 234 RYQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNS-LTDIIA 292 +++ + V ++L+DFG GY+ +L+ + + + + ++ I+ N + + Sbjct: 384 ETIGFFKKLSDAGVLIALDDFGTGYSNFDYLRKLHVNVIKIDQSFVSMIDENDPQSSTLV 443 Query: 293 TTIIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLL 347 +IDL++Q+ + IA+G+ET+ Q ++ + + +++G S PLP D + L Sbjct: 444 NCVIDLAQQMKLMTIAEGVETEFQTEFLSRKHINFMQGYFFSRPLPFDELAQTWL 498 >UniRef50_B9L066 C-di-GMP phosphodiesterase A n=1 Tax=Thermomicrobium roseum DSM 5159 RepID=B9L066_THERP Length = 1008 Score = 91.3 bits (225), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 54/232 (23%), Positives = 111/232 (47%), Gaps = 7/232 (3%) Query: 116 NIYYQPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHI----- 170 I+YQP+ +G + + + + D + + + +S L + Sbjct: 763 QIHYQPVIAVSSGRLTSLEALVRWHHPDRGPIS-PAVFVPLAETTGLISQLTQWVLLQAC 821 Query: 171 NKLFSPIKNNLPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELY 230 +L++ + L I++N++P D L D+ + ++V G E RL L+ T+ + Sbjct: 822 RQLWAWSRAGLAPELSISVNLSPTDFLHLDVPQLVDDILQVTGLEPRRLTLEL-TESAML 880 Query: 231 IIRRYQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDI 290 + L R+R + + ++DFG GY+ L +L+ +P S + + +T+ DI+ + + Sbjct: 881 DPAVSRERLERLRALGIAVLIDDFGAGYSSLGYLKQLPVSGLKIDRTLVADIDHDPASTA 940 Query: 291 IATTIIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAF 342 + +I++L+ L + V A+GIE+ +Q + E G Y +G + P P +A Sbjct: 941 VVRSILELAGALELSVTAEGIESARQLAVLRELGCHYAQGFFVGRPAPPNAI 992 >UniRef50_C6DJC0 EAL domain protein n=4 Tax=Pectobacterium RepID=C6DJC0_PECCP Length = 535 Score = 90.9 bits (224), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 58/242 (23%), Positives = 121/242 (50%), Gaps = 11/242 (4%) Query: 108 KGESMAHYNIYYQPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLF 167 KG + +++YYQPIY+A++ G + + + S+G D I+ ++ + + Sbjct: 274 KGIANGEFSVYYQPIYDAESQTCTGVETLLRWRRSNGKWIRPDI-FISAAEAESMIIPIT 332 Query: 168 GHINKLFSP--IKNNLPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFST 225 H+ L + + GF + +N+ E + + F + + + + L+ + Sbjct: 333 RHLFDLVASDIASWQVKPGFHLGLNVAAEHLHHPSFVSDVHRFAEKVASHSLSISLELTE 392 Query: 226 KEELY----IIRRYQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHD 281 + + II+R L ++R + ++++DFG G+ LS+LQN P + + + Sbjct: 393 RNLISNGPEIIQR----LHQLREDGFMITIDDFGTGHCSLSYLQNFPLDCLKIDQGFVSA 448 Query: 282 IESNSLTDIIATTIIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADA 341 I S I II+LS ++++ +A+G+ETK+Q Y+ + GVKY++G + P+ ++ Sbjct: 449 ISSPDEEAPILDAIINLSHRINLQSVAEGVETKQQLMYLQQHGVKYIQGFLYAKPMDNES 508 Query: 342 FV 343 F+ Sbjct: 509 FL 510 >UniRef50_Q1ZT31 Putative uncharacterized protein n=2 Tax=Photobacterium RepID=Q1ZT31_PHOAS Length = 538 Score = 90.5 bits (223), Expect = 8e-17, Method: Compositional matrix adjust. Identities = 52/228 (22%), Positives = 111/228 (48%), Gaps = 12/228 (5%) Query: 118 YYQPIYNAKNGNIAGCDVTIALKNSDGSAFA-------LDSDRINYNPNDNKVSYLFGHI 170 +YQPI N+ G+I GC+ I ++G + + ++ Y D +S++ I Sbjct: 299 FYQPIINSMTGSIVGCESLIRWCKANGEIISPANFIDIAEQNKQIYEITDVLISHVTNDI 358 Query: 171 NKLFSPIKNNLPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELY 230 KL NN+ FF++IN+ P + + L+ + R+ ++ + + Sbjct: 359 AKL-----NNISDDFFVSINVVPRQLQNQTFATKLLNTLSANKVSNHRISIEVTERTPFT 413 Query: 231 IIRRYQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDI 290 + ++ ++R+ +N++ + L+D G G+ S+ Q +P + + K I ++ + Sbjct: 414 DLASAKAVMQRLVDNHIGIKLDDAGTGFGGFSYFQELPIRTLKIDKMFIDTIGTSDVKAN 473 Query: 291 IATTIIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLP 338 I II K+ + +IA+G+ET++Q Y+ +G+ ++G + P+P Sbjct: 474 ILNAIISFGKKAKLTMIAEGVETQEQVNYLKTQGIFLIQGFFYAKPMP 521 >UniRef50_A4B9Y4 Putative uncharacterized protein n=1 Tax=Reinekea blandensis MED297 RepID=A4B9Y4_9GAMM Length = 515 Score = 90.5 bits (223), Expect = 9e-17, Method: Compositional matrix adjust. Identities = 64/239 (26%), Positives = 120/239 (50%), Gaps = 17/239 (7%) Query: 113 AHYNIYYQPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGH--I 170 A +N+Y QPI + K+G + GC+ AL S L D+ + ++ F I Sbjct: 279 AFHNLY-QPILDLKSGAMVGCE---ALARCHLSNEPLYPDQFIPEVARSGQTWRFTKLMI 334 Query: 171 NKLFSPI--KNNLPHGFFITININPEDIL---TCDIERECLHFIKVFGTERIRLVLQFST 225 + + + + LP GF + N+ P DI T D + + R LVL+ Sbjct: 335 QQGLTELSAETALPDGFRVNFNLFPADIAAAYTRDFAK-----MSTVANSRFTLVLEVIE 389 Query: 226 KEELYIIRRYQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESN 285 ++L ++ Q+ L ++ ++L+DFG GY+ L+ +++ Y+ + ++ D+E Sbjct: 390 DQQLEG-KQAQTELEWLKAQGYGVALDDFGTGYSNLNQIRDFQADYLKIDRSFIMDLEDG 448 Query: 286 SLTDIIATTIIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVR 344 S+ + I+D+++QL++ V+A+GIE +Q + + GV+Y +G P+ A+A VR Sbjct: 449 SIKSSLIPYIVDIARQLNLFVVAEGIENARQWEALRDMGVQYGQGYYFGKPMSAEALVR 507 >UniRef50_Q3ID42 Putative uncharacterized protein n=2 Tax=Alteromonadales RepID=Q3ID42_PSEHT Length = 522 Score = 89.7 bits (221), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 67/251 (26%), Positives = 116/251 (46%), Gaps = 18/251 (7%) Query: 109 GESMAHYNIYYQPIYNAKNGNIAGCDVTIALKNSDG----SAFALDSDRINYNPNDNKVS 164 G ++ YQPI N ++G I GC+V K+ G F +IN + K+ Sbjct: 282 GLKSGNFYWVYQPIVNLQSGKIIGCEVLARFKDDYGVLTPDQFIPILRQINLTWSFTKI- 340 Query: 165 YLFGHINKLFSPIKN--NLPHGFFITININPEDILTCDIER-ECLHFIKVFGTERIRLVL 221 IN + + +++ LP G +++NI P CD+E+ L K+ G + + V+ Sbjct: 341 ----MINTVLNELESAEQLPSGLKVSLNIFP-----CDVEQGNVLSLPKIAGLMQSKFVI 391 Query: 222 QFSTKEELYIIRRYQSS-LRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFH 280 E+ Y+ + + + LSL+DFG GY+ L +L N+ F + + ++ Sbjct: 392 CLEITEDEYLDSTIAHGYFKTLIESGFRLSLDDFGTGYSNLKNLHNLSFHQLKIDRSFVQ 451 Query: 281 DIESNSLTDIIATTIIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPAD 340 DI + L + I++L + +A+GIET +Q + E GV Y +G P+P Sbjct: 452 DIATEGLKASMIPNIMELVHKFGYTCVAEGIETTEQEVILKEAGVHYGQGWKYGRPMPIL 511 Query: 341 AFVRKLLASLK 351 F + S+K Sbjct: 512 EFKEYIARSIK 522 >UniRef50_Q3BN81 Putative signal transduction protein n=9 Tax=Xanthomonas RepID=Q3BN81_XANC5 Length = 520 Score = 89.4 bits (220), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 57/249 (22%), Positives = 115/249 (46%), Gaps = 17/249 (6%) Query: 102 LPVVSSKGESMAHYNIYYQPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDN 161 L + +GE + ++YQPI +G G + + + DG D+ + P Sbjct: 271 LEIAVQRGE----FIVHYQPIIALDSGACVGAEALVRWQQPDGVLVPPDA----FIPLAE 322 Query: 162 KVSYLF-------GHINKLFSPIKNNLPHGFFITININPEDILTCDIERECLHFIKVFGT 214 + + + + P P + IN++ +DI + ++ ++ G Sbjct: 323 QSGLILPITDLVVAEVIRELGPTLAADP-ALHVAINVSADDIKSGRVQGVLAQALRGTGV 381 Query: 215 ERIRLVLQFSTKEELYIIRRYQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNL 274 + +L ++ +T+ L I ++++ +R +S++DFG GY+ L +LQ +P + + Sbjct: 382 DSGQLWVE-ATERSLMDIDAARTTITHLRGAGHTVSIDDFGTGYSSLQYLQGLPLDALKI 440 Query: 275 HKTMFHDIESNSLTDIIATTIIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALS 334 K+ I ++S T + II+++K L + IA+G+E ++Q Y+ GV +G S Sbjct: 441 DKSFVDTIGTHSATSAVTAHIIEMAKTLRLRTIAEGVERQEQLDYLRAHGVDLAQGWLFS 500 Query: 335 SPLPADAFV 343 LPA F+ Sbjct: 501 RALPATGFI 509 >UniRef50_B8GSM4 Diguanylate cyclase/phosphodiesterase n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GSM4_THISH Length = 648 Score = 89.4 bits (220), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 58/257 (22%), Positives = 121/257 (47%), Gaps = 5/257 (1%) Query: 90 KNIICDNFNSSVLPVVSSKGESMAHYNIYYQPIYNAKNGNIAGCDVTIALKNSDGSAFAL 149 K+I + +L K + + ++YQP + +G + G + + ++ + Sbjct: 386 KDINSQTYRQLILENQLVKALAREEFEVHYQPQVDVISGQVVGAEALVRWRHPE-KGLQP 444 Query: 150 DSDRINYNPNDNKVSYLFGHI-NKLFSPIKNNLPHGFFI---TININPEDILTCDIEREC 205 ++ I + L + K+ I+ G+ I +IN++ D+ +C Sbjct: 445 PANFIAIAEETGIIEGLGAWVLQKVCQDIRQLTRDGYRIPRISINLSARQFRQSDLVEQC 504 Query: 206 LHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSLRRIRNNNVYLSLNDFGMGYAELSHLQ 265 + I+ G + L+ + + I LR++ V L+++DFG GY+ L++L+ Sbjct: 505 RNTIRSAGIAPAYIELELTESTIMKDIDIAVGMLRQLNALGVRLAIDDFGTGYSSLNNLK 564 Query: 266 NIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSKQLHIDVIADGIETKKQAGYMIERGV 325 + P + + K+ DI + + I T I+ L+K L ++V+A+G+ET++Q G++ G Sbjct: 565 HFPIDTLKIDKSFVRDIPGDRDDEAIVTAIVALAKSLELEVVAEGVETREQLGFLKRLGC 624 Query: 326 KYLKGIALSSPLPADAF 342 + ++G S PLP + F Sbjct: 625 EIVQGYFFSRPLPFEGF 641 >UniRef50_Q31S15 EAL n=2 Tax=Synechococcus elongatus RepID=Q31S15_SYNE7 Length = 525 Score = 89.0 bits (219), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 59/241 (24%), Positives = 114/241 (47%), Gaps = 7/241 (2%) Query: 101 VLPVVSSKGESMAHYNIYYQPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPND 160 LP V + + YQPI N + G+ G + + K DG A D I + Sbjct: 268 ALPAVIKTAIKRREFFLTYQPIVNLQTGDWVGAEALVRWKRPDGKTMAPDI-FIPVAEDS 326 Query: 161 NKVSYLFGHINKLFS----PIKNNLPHGFFITININPEDILTCDIERECLHFIKVFGTER 216 + + +I + S + P F I IN++ D+ T K + Sbjct: 327 GLIQLITEYIVETLSREAIGFFDEFPR-FHIGINLSAADLHTPQTVSLMRKVAKATSAKP 385 Query: 217 IRLVLQFSTKEELYIIRRYQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHK 276 L+++ +T+ + + +R + + ++++DFG GY+ LS+L+N+ Y+ + K Sbjct: 386 GSLIVE-ATERGFTDPKLANGVISSLRADGIQVAIDDFGTGYSSLSYLENLELDYLKIDK 444 Query: 277 TMFHDIESNSLTDIIATTIIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSP 336 + I ++ T + T II+++K L + ++A+G+ET+ QA ++ RGV+Y +G + P Sbjct: 445 SFVDTIGRDTATSNVVTHIIEIAKTLDLMMVAEGVETELQANFLRNRGVQYAQGWFFAKP 504 Query: 337 L 337 + Sbjct: 505 M 505 >UniRef50_D0I5K6 Rtn protein n=1 Tax=Grimontia hollisae CIP 101886 RepID=D0I5K6_VIBHO Length = 507 Score = 88.6 bits (218), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 59/244 (24%), Positives = 110/244 (45%), Gaps = 23/244 (9%) Query: 118 YYQPIY--NAKNGNIAGCDVTIALKNSDGSAFALDS-----------DRINYNPNDNKVS 164 +YQPI + K I G +V + + SDG D+ DRI D + Sbjct: 262 FYQPIVMPDGKGYKIVGAEVLVRWQASDGEFIPPDTFIPLAEQNGTIDRIT----DQLID 317 Query: 165 YLFGHINKLFSPIKNNLPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFS 224 + H+ L ++P GFF++IN++P + D + L I + L L+ + Sbjct: 318 NVLHHVKAL------DVPDGFFVSINVSPSYLEKIDTADKILSKIADASLDPHLLSLEIT 371 Query: 225 TKEELYIIRRYQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIES 284 + + + + + + + + L+D G GY S+L + + + + I Sbjct: 372 ERTKFGDLNKAAVCIEALTEQGISIKLDDCGTGYGAFSYLHVLNIDTIKIDRMFVDGIGM 431 Query: 285 NSLTDIIATTIIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVR 344 + I +I+ +++ + V+A+GIETK QA Y+I+ GV+ L+G P+P + F + Sbjct: 432 EDFKNTILDSILAFARESKLRVVAEGIETKVQADYLIKSGVEMLQGSYFGDPVPFNVFCK 491 Query: 345 KLLA 348 L+ Sbjct: 492 LLMG 495 >UniRef50_A8HZ55 Putative sensory box/GGDEF family protein n=1 Tax=Azorhizobium caulinodans ORS 571 RepID=A8HZ55_AZOC5 Length = 772 Score = 88.6 bits (218), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 55/232 (23%), Positives = 112/232 (48%), Gaps = 14/232 (6%) Query: 118 YYQPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGH--INKLFS 175 +YQP + G + G + + + + A + + D +++ L G I ++ + Sbjct: 522 FYQPKVSLVTGRVVGFEALMRWRRGPQAFLAPAAFASAFQ--DPELAVLVGDAMIQRVAA 579 Query: 176 PIKNNLPHGFF---ITININPEDILTCDIERECLHFIKVFGTERIRLV-LQFSTKEELYI 231 ++ L G I +N++P D+ R H ++ F R+ E +++ Sbjct: 580 DVRQLLDRGVVLGRIALNLSPAQFTHTDVGR---HLLERFDEARVGAEHFDVEVTETVFL 636 Query: 232 IRR---YQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLT 288 RR + L I ++++L+DFG GYA LSHL+ +P + + ++ D+E++ Sbjct: 637 GRRADHVRPILDEICGAGMHIALDDFGTGYAALSHLKQLPIDTLKIDQSFVLDVEADRFD 696 Query: 289 DIIATTIIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPAD 340 I ++I+L + L + V+A+G+ET QA ++ RG + +G + P+ A+ Sbjct: 697 AAIVCSVIELGRNLGLQVVAEGVETIGQARFLAARGCEVAQGFLYAHPMSAE 748 >UniRef50_A7IP89 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Xanthobacter autotrophicus Py2 RepID=A7IP89_XANP2 Length = 758 Score = 88.2 bits (217), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 46/162 (28%), Positives = 89/162 (54%), Gaps = 2/162 (1%) Query: 186 FITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSLRRIRNN 245 FI +N++P + ++ G RL ++ T+ L+ + LR +R++ Sbjct: 582 FIAVNLSPRQFQRGTLCERIEEVLRRTGLPAARLEVEI-TENVLFGAVAAERKLRDMRDS 640 Query: 246 NVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSKQLHID 305 V ++L+DFG GY+ L++L+ P S + + ++ HD+ + +I AT II +++ L +D Sbjct: 641 GVRIALDDFGTGYSSLAYLKRFPISKLKIDRSFVHDLPRAADAEI-ATAIISIARALGLD 699 Query: 306 VIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLL 347 V+A+GIE +Q ++ ERG + +G P+ ++ F+R L Sbjct: 700 VVAEGIEAPEQCAFLKERGCGFGQGYLFGRPVTSERFLRLAL 741 >UniRef50_D0I998 Regulatory component of sensory transduction system n=1 Tax=Grimontia hollisae CIP 101886 RepID=D0I998_VIBHO Length = 583 Score = 88.2 bits (217), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 59/241 (24%), Positives = 115/241 (47%), Gaps = 6/241 (2%) Query: 111 SMAHYNIYYQPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKV----SYL 166 S +++ YQP+Y+ KN +I G + + N + A A ++ I N + ++ Sbjct: 325 SRCEFSLVYQPLYDLKNNSITGAEALLRWNNDELGAVA-PAEFIPIAEQSNLIYEIGKFV 383 Query: 167 FGHINKLFSPIKNNLPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTK 226 + FS + + + + +NI+P+ I + ++ G E RL L+ + Sbjct: 384 LDKAMEDFSSLNDPSGNPLHLAVNISPQQIRQPHFIDDLTGILEKHGFEASRLELEVTEN 443 Query: 227 EELYIIRRYQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNS 286 L + ++++ N S++DFG GY+ LS+L PF + + +T I Sbjct: 444 LLLSNQPNVKKMIKKLHNLGTEFSMDDFGTGYSSLSYLLQFPFDALKIDRTFVDGITDVE 503 Query: 287 LTDIIATTIIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKL 346 + + +AT +I +++ L I +A+G+ET++Q + +G +G LS P+ + RKL Sbjct: 504 MKEALATAVISMAQGLQIKTVAEGVETEEQLEMLKSKGCDLAQGYYLSRPVDIENL-RKL 562 Query: 347 L 347 L Sbjct: 563 L 563 >UniRef50_C9Y1D6 Uncharacterized protein yjcC n=4 Tax=Enterobacteriaceae RepID=C9Y1D6_CROTZ Length = 536 Score = 87.8 bits (216), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 59/241 (24%), Positives = 119/241 (49%), Gaps = 21/241 (8%) Query: 117 IYYQPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINKLFSP 176 ++YQPI + K+G G + + +G + + P K + + + Sbjct: 285 LHYQPIMDIKHGMCVGAEALLRWPGYNGQVMS----PAEFIPLAEKTGMIAQVTDYVVEE 340 Query: 177 IKNNLPH------GFFITININPEDI----LTCDIE-RECLHFIKVFGTERIRLVLQFST 225 + N+L H +I+IN++ D L IE + H ++ ++I++ + T Sbjct: 341 LFNDLGHFLATHPQIYISINLSASDFHSSRLIALIEGKNSQHGVR---AQQIKIEV---T 394 Query: 226 KEELYIIRRYQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESN 285 + + R ++ R + ++++DFG GY+ L +L ++ + + K+ + +N Sbjct: 395 ERGFIDVPRTTPVIQAFRQSGFEIAIDDFGTGYSNLHNLYSLNVDILKIDKSFIDTLTTN 454 Query: 286 SLTDIIATTIIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRK 345 S + +IA IID+++ L + +IA+G+ET +Q G++++RGV+Y +G S LP FV Sbjct: 455 STSHLIAEHIIDMAQSLRLKIIAEGVETAEQVGWLLKRGVQYCQGWHFSKALPRQEFVAW 514 Query: 346 L 346 L Sbjct: 515 L 515 >UniRef50_A7IK26 Diguanylate cyclase/phosphodiesterase n=1 Tax=Xanthobacter autotrophicus Py2 RepID=A7IK26_XANP2 Length = 764 Score = 87.8 bits (216), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 49/227 (21%), Positives = 106/227 (46%), Gaps = 1/227 (0%) Query: 114 HYNIYYQPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINKL 173 H+ + YQPI+ A +G +AG + +S+ I+ + L + + Sbjct: 528 HFVLAYQPIFEAASGRLAGFEALARWPHSE-RGLVPPETFISVAEETGLIVPLGAWVLRE 586 Query: 174 FSPIKNNLPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIR 233 + P F+++N++P L ++ ++ G RL L+ + L Sbjct: 587 ACRVAAEWPPNLFVSVNLSPLQFLGAQTHQQVRAALEESGLPARRLELEITESSLLKQGP 646 Query: 234 RYQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIAT 293 +++L ++ + + ++L+DFG GY+ L++L+ + + + ++ HD+ + + I Sbjct: 647 TVRTTLEQLADEGITVALDDFGTGYSSLAYLRTLNIGRIKVDRSFVHDVAQSPHSLAIVR 706 Query: 294 TIIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPAD 340 I+ L++ L + A+GIET+ Q + + G +L+G L P A+ Sbjct: 707 AIVGLARTLSLSCTAEGIETEAQRRILADEGCTHLQGFFLGRPTTAE 753 >UniRef50_A4TND3 Membrane protein n=16 Tax=Enterobacteriaceae RepID=A4TND3_YERPP Length = 490 Score = 87.8 bits (216), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 57/245 (23%), Positives = 119/245 (48%), Gaps = 14/245 (5%) Query: 108 KGESMAHYNIYYQPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLF 167 +G + + YQP++ + N I+G + I ++ + D I Y + + L Sbjct: 239 RGIRRGEFFVEYQPVFRSHNQTISGLEALIRWQHPTEGRISPDI-FIPYAETQHLIQPLT 297 Query: 168 GHINKLF----SPIKNNLPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQF 223 H+ +L + + N P G + NI+P + D ++ ++ T+ V + Sbjct: 298 THLFELIIRDTALMVNLFPTGAKLAFNISPAHLADDDFCQDVSRLLQQLNTDIFTPVFEI 357 Query: 224 S----TKEELYIIRRYQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMF 279 + ++EL + + + + ++++DFG G++ L +L+ Y+ + + Sbjct: 358 TERGMVQKELAL-----KQFAWLHSQGIQIAVDDFGTGHSALIYLERFTLDYIKIDRGFI 412 Query: 280 HDIESNSLTDIIATTIIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPA 339 I N++T + +++ L+K+L+I+ IA+GIET++Q Y+ + GV YL+G LS PL Sbjct: 413 STIGENTVTTPVLDSVLILAKKLNIETIAEGIETEQQLHYLAKHGVNYLQGYLLSKPLSV 472 Query: 340 DAFVR 344 +A + Sbjct: 473 EALAK 477 >UniRef50_C6XNM0 Diguanylate cyclase/phosphodiesterase n=1 Tax=Hirschia baltica ATCC 49814 RepID=C6XNM0_HIRBI Length = 736 Score = 87.4 bits (215), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 56/225 (24%), Positives = 104/225 (46%), Gaps = 1/225 (0%) Query: 116 NIYYQPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINKLFS 175 ++YQPI + +G G + +A N+ F + I N +S L + + Sbjct: 492 QVHYQPIVDTHSGRTVGMEA-LARWNNPQLGFVSPAQFIPAAENLGIISKLTTILMEKAL 550 Query: 176 PIKNNLPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRY 235 + ++ +++ N++ D+ + + + + I G RLV + + + R Sbjct: 551 KVASSWTTDTYLSFNLSASDLASPETPLKLMAIIMRSGFSPKRLVFEITETTMMVNFERA 610 Query: 236 QSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTI 295 LR R+ V ++L+DFG GY+ L ++Q +P + + + D+E+ ++ I TI Sbjct: 611 NEVLRPFRDLGVEIALDDFGTGYSSLGYIQKMPIDRLKIDRAFVSDLEAKKISRDIMGTI 670 Query: 296 IDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPAD 340 +DL L I I +G+ET KQ + G ++G S PLP D Sbjct: 671 VDLCSHLEIKCIVEGVETHKQLELVQLLGCHLIQGYYYSKPLPTD 715 >UniRef50_Q7P1U8 Putative uncharacterized protein n=1 Tax=Chromobacterium violaceum RepID=Q7P1U8_CHRVO Length = 513 Score = 87.4 bits (215), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 42/167 (25%), Positives = 89/167 (53%) Query: 180 NLPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSL 239 +LP F + +NI+ + + +C + + L L+ + +E + I ++ Sbjct: 339 SLPQDFHLGVNISRAHLQEGSLYGDCRRWAGLLAESGAVLTLELTEREMVEITPEVEALF 398 Query: 240 RRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLS 299 R + V ++L+DFG G++ L +LQ + + + + I S+ L+ I ++ +L+ Sbjct: 399 RSLDALGVKIALDDFGTGHSSLVYLQQLTVDGLKIDQGFVAGIGSDGLSGHIVDSVAELA 458 Query: 300 KQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKL 346 +L ++ +A+G+ET +Q Y+ GV +L+G ++ P+P D FVR++ Sbjct: 459 AKLGLETVAEGVETAEQFDYLSRLGVGWLQGFYIARPMPLDEFVRRV 505 >UniRef50_Q47UD6 Sensory box sensor/GGDEF/EAL domain protein n=1 Tax=Colwellia psychrerythraea 34H RepID=Q47UD6_COLP3 Length = 921 Score = 87.4 bits (215), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 64/263 (24%), Positives = 119/263 (45%), Gaps = 25/263 (9%) Query: 104 VVSSKGESMA--HYNIYYQPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDN 161 V++ ES+ H+ +YYQP++ + G + I + + P D Sbjct: 654 VLTDLAESLTKEHFELYYQPLFTIDQNILVGAEALIRWHHPEKGMI----------PPDQ 703 Query: 162 --KVSYLFGHINKLFS--------PIKNNLPHG---FFITININPEDILTCDIERECLHF 208 V+ G IN+L IKN L G F + INI+P D+ + L Sbjct: 704 FIAVAEKSGLINELGDWVLAQACREIKNFLNAGITVFKVAINISPVQFRRKDLLQHMLMI 763 Query: 209 IKVFGTERIRLVLQFSTKEELYIIRRYQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIP 268 + + L+ + + + + +++ + + L+++DFG GY+ LS+L+ P Sbjct: 764 LAQHDVSAELIELEITEGAVMDNVDQAIETMQALHDAGFQLAMDDFGTGYSSLSYLKRFP 823 Query: 269 FSYVNLHKTMFHDIESNSLTDIIATTIIDLSKQLHIDVIADGIETKKQAGYMIERGVKYL 328 V + ++ D+E++ + I T II +S L + V+A+G+ET++Q Y+ Y+ Sbjct: 824 IQKVKIDRSFISDLENDDDSKSITTAIIQMSHSLGLHVLAEGVETEEQLHYLQAEKCDYV 883 Query: 329 KGIALSSPLPADAFVRKLLASLK 351 +G P+PA F++ S K Sbjct: 884 QGYYTGRPIPASEFIKNFSESKK 906 >UniRef50_B9MPE9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Anaerocellum thermophilum DSM 6725 RepID=B9MPE9_ANATD Length = 617 Score = 87.0 bits (214), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 66/245 (26%), Positives = 119/245 (48%), Gaps = 16/245 (6%) Query: 109 GESMAHYNIYYQPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYL-- 166 G + + ++YQP N KN I G + + + S F + + P K + Sbjct: 367 GLDLNEFVVFYQPTINLKNNQICGFEALLRW-HYLKSVFV---SPLEFIPVAEKCGLIVE 422 Query: 167 FGHIN-----KLFSPIKNNLPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVL 221 G+I K+ + + F I+INI+P+ + R + ++ G ++ L Sbjct: 423 LGNIVLEQSLKVAKWLSRYITDEFIISINISPQQFSDREFIRSTIQILENEGLANVK--L 480 Query: 222 QFSTKEELYI--IRRYQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMF 279 QF E+L I I + ++R N+ +L+DFG+ Y+ L++L+ +P V + K+ Sbjct: 481 QFEITEKLAIENIDYAIEVINQLRKYNITFALDDFGVDYSSLNYLRRLPIQAVKIDKSFV 540 Query: 280 HDIESNSLTDIIATTIIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPA 339 DIE + T I TII L K+L + V+A+G+ET++ + E G Y++G +S PL Sbjct: 541 QDIEKDE-TYFIVETIIKLCKKLGLKVVAEGVETEEHYRAVKELGCDYVQGYFISRPLGV 599 Query: 340 DAFVR 344 + ++ Sbjct: 600 EELIK 604 >UniRef50_B4SIC9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Stenotrophomonas RepID=B4SIC9_STRM5 Length = 1020 Score = 87.0 bits (214), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 51/236 (21%), Positives = 110/236 (46%), Gaps = 5/236 (2%) Query: 115 YNIYYQPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINKLF 174 + +Y+QPI +A +G+ A + + +DGS F ++ I + + L + + Sbjct: 781 FQLYFQPIRHAGDGSPAALEALLRWPQADGS-FIPPNEFIPLCEDTGLILALGRWVIRAA 839 Query: 175 SPIKNNLPHGFF----ITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELY 230 + + L + I +N++ D+ E + FG R L ++ + + Sbjct: 840 AKAQRRLVDAGWGELPIAVNVSAVQFFNSDLVTEFTRAQQDFGLARGALHVELTESSLMR 899 Query: 231 IIRRYQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDI 290 + +++R+ + +SL+DFG GY+ +S+LQ++P + + ++ D+E+N Sbjct: 900 KPAQAMQTMQRLHEQGISVSLDDFGTGYSSMSYLQHLPLDILKIDRSFVADVETNPRNAS 959 Query: 291 IATTIIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKL 346 I ++ L + + +IA+G+ET Q ++ G ++G L P P + + L Sbjct: 960 ICRALLSLGHSMGLTIIAEGVETPGQLDWLAAHGCDQVQGYLLGRPAPLEQIIDAL 1015 >UniRef50_B7KTV8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Methylobacterium extorquens group RepID=B7KTV8_METC4 Length = 772 Score = 87.0 bits (214), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 56/236 (23%), Positives = 113/236 (47%), Gaps = 29/236 (12%) Query: 119 YQPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINKLFSPI- 177 YQP ++ G I+GC+ + ++ + + + + P + L PI Sbjct: 534 YQPFVKSETGVISGCEALLRWRHPERGMIS----PVEFIP--------LAEESGLIVPIG 581 Query: 178 ----------KNNLPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKE 227 + P + I++N++P + D+ + L + G RL ++ + Sbjct: 582 MWVIQQACREAASWPSTYRISVNVSPVQFRSRDLPQVILAALTSSGLAPARLEVEVT--- 638 Query: 228 ELYIIRRYQSSL---RRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIES 284 E +I ++L R+IR+ V ++L+DFG GY+ LS+L+ PF + + ++ ++++ Sbjct: 639 EAVLIDDADTALEILRQIRSLGVRVALDDFGTGYSSLSYLRRFPFDKIKIDRSFVQELDT 698 Query: 285 NSLTDIIATTIIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPAD 340 + +I I D+++ L + V A+G+ET QA + + G + L+G S P PA+ Sbjct: 699 RHDSQVIVQAIRDMAQGLGMTVTAEGVETDDQAKRLRQTGCEELQGFLYSRPRPAN 754 >UniRef50_Q2BMA7 PAS:GGDEF protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BMA7_9GAMM Length = 932 Score = 87.0 bits (214), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 59/244 (24%), Positives = 115/244 (47%), Gaps = 9/244 (3%) Query: 112 MAHYNIYYQPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHIN 171 + + +YYQP + K+ I G + I + + + D+ + V ++ Sbjct: 689 LGQFELYYQPQLDVKSNRIIGAEALIRWNHPEKGMISPDAFIPLAEESGLIVDIGSWVLH 748 Query: 172 KLFSPIKNNLPHGF---FITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEE 228 + S + GF +++N++ + RE I+ +G L L+ + E Sbjct: 749 QASSQLAQWRKQGFDQLSVSVNLSALQVQKESFAREVADVIREYGVPEACLDLELT---E 805 Query: 229 LYIIRRYQ---SSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESN 285 I+R + ++L +I N + +S++DFG GY+ LS+L+ P + + ++ DI + Sbjct: 806 SMIMRNAEETIAALDKIHNLGIQISVDDFGTGYSSLSYLKRFPLDKLKIDRSFVQDITVD 865 Query: 286 SLTDIIATTIIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRK 345 + +I TII ++ L++ VIA+G+ET Q + + G + +G + PLP + Sbjct: 866 TDDAMICKTIISMAHNLNLQVIAEGVETNAQLELLRDYGCEQYQGYLFAKPLPVEQMTEH 925 Query: 346 LLAS 349 LLAS Sbjct: 926 LLAS 929 >UniRef50_A7K0U5 Sensory box/GGDEF family protein n=14 Tax=Vibrio RepID=A7K0U5_VIBSE Length = 815 Score = 87.0 bits (214), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 40/108 (37%), Positives = 69/108 (63%) Query: 237 SSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTII 296 +SL ++R + +SL+DFG GY+ LS+L+ +P + + + ++ D+ SNS ++ I II Sbjct: 708 ASLNQLRELGIEISLDDFGTGYSSLSYLKGLPINKLKIDRSFVSDVPSNSDSNAIVNAII 767 Query: 297 DLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVR 344 + K L + V+A+GIET++QA Y+ E+G Y +G S P+ A+ R Sbjct: 768 AMGKTLSLKVVAEGIETQEQADYLFEKGCVYGQGYLFSRPVSAEKLFR 815 >UniRef50_A9ME91 EAL n=35 Tax=Brucella RepID=A9ME91_BRUC2 Length = 530 Score = 86.7 bits (213), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 60/235 (25%), Positives = 111/235 (47%), Gaps = 9/235 (3%) Query: 114 HYNIYYQPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHI-NK 172 + + YQP+ K G G + + + DG A + I N +S + + Sbjct: 277 EFTVVYQPLIELKTGICVGAEALVRWRRPDG-AMVMPDLFIPIAENSKMISQITEQVVAN 335 Query: 173 LFSPIKNNLP--HGFFITININPEDILTCDIERECLHFIKVFG--TERIRLVLQFSTKEE 228 + + L + IN+ +D+ I I+ G TE+I L +T+ Sbjct: 336 TVRDLGDVLAADEALHVAINMADDDLAQGRILTVVQRAIRGTGIRTEQIWLE---ATERG 392 Query: 229 LYIIRRYQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLT 288 + ++ + + R ++++DFG GY+ L +LQ +P + + K+ + ++S T Sbjct: 393 FMDPKSTRTIIEKARELGHSIAIDDFGTGYSSLHYLQELPVDTLKIDKSFISTLGTDSAT 452 Query: 289 DIIATTIIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFV 343 IA II ++K L + ++A+GIE ++QA Y+I GV++ +G S PLPA F+ Sbjct: 453 SPIAAHIIAMAKSLDLIIVAEGIERQEQADYLIAHGVQFGQGWLYSPPLPAQEFI 507 >UniRef50_C5S5K8 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Allochromatium vinosum DSM 180 RepID=C5S5K8_CHRVI Length = 1069 Score = 86.7 bits (213), Expect = 1e-15, Method: Composition-based stats. Identities = 48/164 (29%), Positives = 91/164 (55%), Gaps = 4/164 (2%) Query: 187 ITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQS--SLRRIRN 244 + +N++ + + D+ ++ G RL L+ + E + + +R Q+ LR ++ Sbjct: 902 VAVNLSGRQLRSPDLVERVTRVLRETGLPAERLKLELT--ESMIMDQREQALERLRALKA 959 Query: 245 NNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSKQLHI 304 V LS++DFG GY+ L++L+ +P + + + DI +S IA TII +++ L + Sbjct: 960 LGVRLSIDDFGTGYSSLAYLKRLPIDELKIDRDFVRDIPEDSSDMEIAATIIAMARNLRL 1019 Query: 305 DVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLLA 348 +VIA+G+ET +Q ++I +G +G PLPA+AF + + A Sbjct: 1020 NVIAEGVETPEQCDFLIRQGCTAGQGYLFGRPLPAEAFAQVMRA 1063 >UniRef50_A6AJG8 Rtn protein n=1 Tax=Vibrio harveyi HY01 RepID=A6AJG8_VIBHA Length = 501 Score = 86.7 bits (213), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 41/168 (24%), Positives = 94/168 (55%) Query: 179 NNLPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSS 238 +LP F + NI+ + + ++ + L F+ F ++++L L+ + +E + ++ Sbjct: 331 QSLPPDFSVAFNISAKHCVNSELLEDSLEFLSSFPEKKVQLCLELTERELVRDTDEARAL 390 Query: 239 LRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDL 298 + ++V L+++DFG G++ LS+L+ F + + ++ I ++S++ I ++DL Sbjct: 391 FHSLSEHDVSLAIDDFGTGHSSLSYLRQFRFDILKIDQSFVQMIGNDSVSAHIVENLLDL 450 Query: 299 SKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKL 346 + +L + IA+G+ET +QA Y+ + L+G + P+P F+++L Sbjct: 451 ASRLGMKTIAEGVETAEQAEYLRSHNIDCLQGYYFAKPMPLKDFIQQL 498 >UniRef50_B9Z8G8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z8G8_9NEIS Length = 887 Score = 86.7 bits (213), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 57/240 (23%), Positives = 112/240 (46%), Gaps = 12/240 (5%) Query: 114 HYNIYYQPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYN-------PNDNKVSYL 166 + ++YQP+ +G + G +V + + G A S I P + V + Sbjct: 642 EFVLHYQPLVELASGRVLGAEVLVRWQPP-GEALVPPSRFIPLAEETGLIVPLGDWVLHE 700 Query: 167 FGHINKLFSPIKNNLPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTK 226 K + + LP + +N++P L D+ + ++ G +L L+ + Sbjct: 701 ACRQGKAW--LDAGLP--LLLAVNLSPRQFLRHDLVGQVRKALQGSGLPPAQLELELTEG 756 Query: 227 EELYIIRRYQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNS 286 + + +L ++ V L+++DFG GY+ L++L+ P + + ++ D+ +S Sbjct: 757 ALMEQAEQAVKTLHALKRLGVSLAIDDFGTGYSSLAYLKRFPLDKLKIDRSFVRDLPRDS 816 Query: 287 LTDIIATTIIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKL 346 I TTII + + L ++ +A+G+ET +Q ++ + G +G S PLPA+AF R L Sbjct: 817 SDAEIVTTIIAMVRNLKLEALAEGVETPQQLAFLRQLGCDSGQGYLFSPPLPAEAFERWL 876 >UniRef50_Q0C2A3 Putative sensory box-containing diguanylate cyclase n=1 Tax=Hyphomonas neptunium ATCC 15444 RepID=Q0C2A3_HYPNA Length = 792 Score = 86.7 bits (213), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 52/225 (23%), Positives = 110/225 (48%), Gaps = 7/225 (3%) Query: 117 IYYQPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINKLFSP 176 I++QPI +A C+ + ++ + + I + + ++ + + + Sbjct: 541 IHFQPIVDATTHKTVACETLLRWQHPE-RGLVYPGEFIEHAEENGLITRMGEWVIRAALA 599 Query: 177 IKNNLPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQ 236 LP I +NI+P + + + ++ I + RL L+ + E ++ + Sbjct: 600 EATRLPEHVRICVNISPLQVHSASLASTIVNAIAASNMDPSRLELEIT---ETALMSNTE 656 Query: 237 SSLRRI---RNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIAT 293 +LRR+ R+ V ++L+DFG G++ L+HL++ PF + + +T DIE+ + + I Sbjct: 657 FTLRRLHQLRSLGVRIALDDFGTGFSSLNHLRSFPFDRIKIDRTFVSDIETRADSQAITK 716 Query: 294 TIIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLP 338 +++ L++ L + A+G+ET QA Y+ + G + L+G S P Sbjct: 717 SMVSLARSLGMQCTAEGVETSLQAEYLSKLGCEELQGYFFSHAHP 761 >UniRef50_A5W2V7 Diguanylate phosphodiesterase n=16 Tax=Pseudomonas RepID=A5W2V7_PSEP1 Length = 528 Score = 86.7 bits (213), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 55/233 (23%), Positives = 110/233 (47%), Gaps = 5/233 (2%) Query: 118 YYQPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKV----SYLFGHINKL 173 Y+QP+ + AG +V + + D I Y + ++ L H + Sbjct: 277 YFQPVVRKGDYRWAGAEVLMRWHHPREGLVRPDL-FIPYAEHSGQIVAMTRALLTHTAQS 335 Query: 174 FSPIKNNLPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIR 233 +P L GF I +NI + + +C F++ F R+ L L+ + ++ + Sbjct: 336 LAPYAGLLEDGFHIGVNITADHCRDLSLLDDCRTFLQHFPPGRVVLTLELTERKLIEPTP 395 Query: 234 RYQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIAT 293 ++ V ++L+DFG G + L++L+ Y+ + ++ I +++L+ I Sbjct: 396 VTLELFEKLHAMGVMIALDDFGTGQSSLNYLRQFKVDYLKIDQSFVAMIGADALSVHILE 455 Query: 294 TIIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKL 346 +II+LS +L + ++A+G+ET Q Y+ + GV + +G + P+PA F+ L Sbjct: 456 SIIELSGKLDLGIVAEGVETDLQRDYLAKHGVDFQQGYLFARPMPAAQFLAAL 508 >UniRef50_Q139W0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Rhodopseudomonas palustris BisB5 RepID=Q139W0_RHOPS Length = 801 Score = 86.7 bits (213), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 49/156 (31%), Positives = 77/156 (49%) Query: 187 ITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSLRRIRNNN 246 I +N++P D D+ L + G RL ++ + + R S LRRIR+ Sbjct: 630 IAVNLSPIDFRRGDVASMILSILFETGLSPGRLNVEITEGVLMQDDGRAMSQLRRIRDLG 689 Query: 247 VYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSKQLHIDV 306 +L+++DFG GY+ LS+LQ PF + + T + SN + I II L L + V Sbjct: 690 AHLAMDDFGSGYSSLSYLQAFPFDKIKIDGTFVAQLGSNPQSRAIVRAIIGLGHSLGLSV 749 Query: 307 IADGIETKKQAGYMIERGVKYLKGIALSSPLPADAF 342 IA+G+ET Q ++ G +G + P PA A+ Sbjct: 750 IAEGVETNAQFELLVALGCDEFQGYLIGHPAPAAAY 785 >UniRef50_Q2SFI2 FOG: EAL domain n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SFI2_HAHCH Length = 913 Score = 86.3 bits (212), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 60/237 (25%), Positives = 112/237 (47%), Gaps = 6/237 (2%) Query: 115 YNIYYQPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGH-INKL 173 + +YYQP +N +G + G + + ++ IN + + + G IN+L Sbjct: 655 FELYYQPQFNLTSGRLVGAETLLRWRHPT-RGLITPYCFINIAEDSALIDPIGGWVINQL 713 Query: 174 FSPIKNNLPHGF---FITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKE-EL 229 + L G I N++ + + D++ H ++ +G E L L+ E L Sbjct: 714 CRDVAGWLKGGLKLPRIAFNVSSKQLEHYDVKGRIEHALQRWGLEPSDLDLELEVTEGAL 773 Query: 230 YIIRRYQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTD 289 R LR++R + ++++DFG GY+ LS L+++P + + + D+ + Sbjct: 774 QHEERSVEVLRQVRLLGLSVAIDDFGTGYSSLSRLKHMPIDTLKIDRMFIRDLPDDPNNQ 833 Query: 290 IIATTIIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKL 346 +A+ II L + L + V+A+G+E +Q ++ ER +G LS PLP AF + L Sbjct: 834 ALASGIILLGRALGLKVVAEGVENVEQLRFLQERNCDEAQGFLLSKPLPKAAFEKML 890 >UniRef50_Q60BD0 Sensory box protein n=1 Tax=Methylococcus capsulatus RepID=Q60BD0_METCA Length = 1214 Score = 86.3 bits (212), Expect = 1e-15, Method: Composition-based stats. Identities = 43/158 (27%), Positives = 81/158 (51%) Query: 187 ITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSLRRIRNNN 246 +++N++P + D+ + F G L L+ + L + + R++N Sbjct: 1048 LSVNVSPRQFMRSDLMTQLEQFCLENGVSPTDLCLELTEGVLLNHTELAVAQIGRLKNLG 1107 Query: 247 VYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSKQLHIDV 306 V S++DFG GY+ L++L+++P + + D+E +S I TI+ +++ L +DV Sbjct: 1108 VSFSIDDFGTGYSSLAYLKHLPLDDLKIASAFVRDLEQDSSDAAIVETIVSMARHLGLDV 1167 Query: 307 IADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVR 344 IA+G+ET+ Q + G +G + PLP D F+R Sbjct: 1168 IAEGVETRTQVEILERYGCHRFQGNYFARPLPKDDFIR 1205 >UniRef50_A9BUE4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Comamonadaceae RepID=A9BUE4_DELAS Length = 692 Score = 85.9 bits (211), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 48/232 (20%), Positives = 110/232 (47%), Gaps = 5/232 (2%) Query: 113 AHYNIYYQPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVS----YLFG 168 + +YYQP +G +AG + + ++ L + I + +S ++ Sbjct: 446 GEFELYYQPQTFTADGRLAGFEALVRWRHPQ-RGLVLPGEFIGFAEARGLISAIDHWVLR 504 Query: 169 HINKLFSPIKNNLPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEE 228 + ++ +++N++ + D+ RE ++ G E L ++ + Sbjct: 505 EACRQARQWQDEGLAPVPLSVNLSALEFRQRDMAREVAQVLEETGLEARWLHIELTESTL 564 Query: 229 LYIIRRYQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLT 288 ++ + Q +L+ ++ V L+++DFG GY+ L++L+ P + + + ++ D+ + Sbjct: 565 MHTSGQVQDTLQALQALGVGLAIDDFGTGYSSLAYLRRHPINQLKIDRSFIADVPDSEDD 624 Query: 289 DIIATTIIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPAD 340 I T I+ + LH+D++A+G+ET Q + E G ++G ++ PLPA+ Sbjct: 625 TAIVTAIVQMGHSLHLDIVAEGVETPAQLALLRELGCGMMQGYLVAPPLPAE 676 >UniRef50_Q1JXT2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JXT2_DESAC Length = 868 Score = 85.9 bits (211), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 43/157 (27%), Positives = 86/157 (54%) Query: 187 ITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSLRRIRNNN 246 + +N+ + I + + ++ L ++ G RL L+ + + ++ +L ++ Sbjct: 701 MAVNLAVQQIESGHLPQQVLQILQYTGLPAQRLELEVTESAIMIEPKKAADALLEFQSMG 760 Query: 247 VYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSKQLHIDV 306 + L+++DFG GY+ L++L+ +P + + ++ DI +N+ DII+ II+LS L +D Sbjct: 761 IRLAIDDFGTGYSSLAYLKRLPLDRLKIDRSFVMDIGTNAGDDIISRAIINLSNSLGMDT 820 Query: 307 IADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFV 343 +A+GIE Q ++ G + +G S PLPADA + Sbjct: 821 VAEGIENTDQLEFLRREGCEIGQGYLFSKPLPADAVM 857 >UniRef50_C0QUQ4 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor n=1 Tax=Persephonella marina EX-H1 RepID=C0QUQ4_PERMH Length = 654 Score = 85.9 bits (211), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 54/224 (24%), Positives = 106/224 (47%), Gaps = 1/224 (0%) Query: 117 IYYQPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINKLFSP 176 IYYQPI N K G I + L N L D I + L I Sbjct: 425 IYYQPIINLKTGEIDSLEALFRL-NDGNETVILPKDIIPVAEETGLIVELGERILNSVLK 483 Query: 177 IKNNLPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQ 236 +P +++NI+ + +R+ L ++ R+V++ + + + Sbjct: 484 FSKKVPQNIKLSVNISSIQLNKPMFDRDFLLSLENSDIPPDRIVIELTETAIMDSVSENI 543 Query: 237 SSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTII 296 + LR ++ + ++++DFG GY+ L++L+ +P ++ + ++ I + ++I TII Sbjct: 544 TKLRNLKEKGIKIAIDDFGTGYSSLNYLKILPVDFLKIDRSFVKGIGRDRNDEMIVKTII 603 Query: 297 DLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPAD 340 ++K +++ IA+G+ET++Q ++IE G Y +G P+P D Sbjct: 604 SMAKSMNLKTIAEGVETEEQLRFLIENGCDYGQGYYFGKPVPED 647 >UniRef50_Q1Z8P6 Putative uncharacterized protein n=1 Tax=Photobacterium profundum 3TCK RepID=Q1Z8P6_PHOPR Length = 507 Score = 85.9 bits (211), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 51/231 (22%), Positives = 114/231 (49%), Gaps = 6/231 (2%) Query: 118 YYQPIYNAKNGNIAGCDVTIALKNSDGSAFA--LDSDRINYNPNDNKVSYLFGHINKLFS 175 +YQPI ++ + + GC++ + +G + L YN +++Y +N++ + Sbjct: 265 FYQPIIDSSSKQVVGCEILVRWIKKNGEIISPNLFIPIAEYNGQIFELTY--DLLNQVSA 322 Query: 176 PI-KNNLPH-GFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIR 233 I K L H F++++N+ PE + + +K E + + + + ++ Sbjct: 323 DIGKFALKHPDFYVSLNVVPEQLEDDNFAENVFKILKNHNIEANHIAFEVTERTPFTNLK 382 Query: 234 RYQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIAT 293 + + + +++N + + L+D G GY S+LQ +P + + K I +N + I + Sbjct: 383 KAERVINQLKNQKIDIKLDDAGTGYGGFSYLQELPIDTLKIDKMFVETIGTNDVKSKILS 442 Query: 294 TIIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVR 344 +II K + +IA+G+E+++Q Y+ +G+ ++G + P+P + F R Sbjct: 443 SIILFGKNAGLKMIAEGVESQEQVDYLNLKGITLMQGYYYAKPMPFEEFTR 493 >UniRef50_B5W1G7 Diguanylate cyclase/phosphodiesterase n=3 Tax=Oscillatoriales RepID=B5W1G7_SPIMA Length = 366 Score = 85.5 bits (210), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 61/230 (26%), Positives = 111/230 (48%), Gaps = 11/230 (4%) Query: 117 IYYQPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKV----SYLFGHINK 172 +YYQPI N KN I G + + ++ + A IN N + +L + Sbjct: 135 LYYQPIVNIKNQRIQGLEALVRWQHPERGLLA-PGHFINIAENTGLIIPIGRWLLHTACQ 193 Query: 173 LFSPIKNNLPHGFF---ITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEEL 229 + +N PH F + +++ DI + E L+ + ++ LVL+ + + Sbjct: 194 QLAEWENQFPHHFLKMSVNLSVKQLDIFLLEQLDEVLNN---YNLKQNSLVLEITESMLV 250 Query: 230 YIIRRYQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTD 289 I + L +I+ + LS++DFG GY+ LS+L +P + + + ++ + Sbjct: 251 ANIEKTCDLLNQIKAKGIGLSIDDFGTGYSSLSYLHQLPVNSLKIDRSFVSPANLSDRHQ 310 Query: 290 IIATTIIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPA 339 +IA +II LSK L + VIA+G+ET +Q ++ + G + +G S P+PA Sbjct: 311 VIAKSIIALSKLLKLHVIAEGVETPEQFHWLKKLGCEAAQGYLFSRPVPA 360 >UniRef50_Q2J3Q8 Diguanylate cyclase/phosphodiesterase with GAF sensor n=2 Tax=Rhodopseudomonas palustris RepID=Q2J3Q8_RHOP2 Length = 743 Score = 85.5 bits (210), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 55/229 (24%), Positives = 107/229 (46%), Gaps = 1/229 (0%) Query: 114 HYNIYYQPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINKL 173 +++YYQP A++G + G + + ++ F S+ I + L + K Sbjct: 501 EFDLYYQPQVEARSGRVIGAEALLRWRHPR-RGFVPPSEFIPVAEETGLIEKLGEWVLKE 559 Query: 174 FSPIKNNLPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIR 233 + P + IN++P + ++ +++ G RL ++ + L Sbjct: 560 AAAEAIRWPAPIKLAINLSPVQLSRGNLTDTVTQALRLSGLPPERLEVEITENVFLEDEV 619 Query: 234 RYQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIAT 293 + +R++R+ V ++L+DFG GY+ LS+L PF + + K ++ S I + Sbjct: 620 NNLAVIRQLRSLGVSVALDDFGTGYSSLSYLTRFPFDQIKIDKFFSMNLIERSDCATIVS 679 Query: 294 TIIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAF 342 ++I L++ L I +A+G+ET +Q + E GV Y +G P+PA A Sbjct: 680 SVITLARGLGISTVAEGVETVRQFELLREAGVDYFQGYLFGHPVPASAL 728 >UniRef50_Q2Y9Y0 Response regulator receiver (CheY-like) modulated diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) n=2 Tax=Betaproteobacteria RepID=Q2Y9Y0_NITMU Length = 756 Score = 85.5 bits (210), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 40/131 (30%), Positives = 77/131 (58%) Query: 219 LVLQFSTKEELYIIRRYQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTM 278 L L+ + + ++ S L+R++ + +S++DFG GY+ L++++ P + + ++ Sbjct: 606 LELELTESSLMMHAKKTVSILQRLKALGIQISIDDFGTGYSSLAYVKRFPIDVLKIDRSF 665 Query: 279 FHDIESNSLTDIIATTIIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLP 338 +I +NS I T IID++ LH+ V+A+G+ET +Q ++ RG ++G LS PLP Sbjct: 666 IQEITTNSADAAITTAIIDMAHSLHVRVVAEGVETAEQFDFLKGRGCDEVQGFYLSPPLP 725 Query: 339 ADAFVRKLLAS 349 A+ + LL+ Sbjct: 726 ANEISQLLLSG 736 >UniRef50_Q3IG16 Putative uncharacterized protein n=2 Tax=Alteromonadales RepID=Q3IG16_PSEHT Length = 1007 Score = 85.5 bits (210), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 60/243 (24%), Positives = 119/243 (48%), Gaps = 6/243 (2%) Query: 112 MAHYNIYYQPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVS----YLF 167 + + ++YQPI K+ ++ + I ++ + + +D I +++ ++F Sbjct: 760 LEQFELFYQPIVCLKDLHVHKAEGLIRWRHPEKGLIS-PADFIPLAEETRQINILGQFVF 818 Query: 168 GHINKLFSPIKNNLPHGFFITININPEDILTCDIE-RECLHFIKVFGTERIRLVLQFSTK 226 + + IK ++ + F +++N++P + T D E + +V + + Sbjct: 819 SQALQTLNDIKAHITNDFQLSVNVSPIQLSTPDSGIDEWGAMLNAANLPASSIVAEITEG 878 Query: 227 EELYIIRRYQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNS 286 + QS L+ + + + L+L+DFG GY+ L++LQ + Y+ + K +I S Sbjct: 879 LMVNPEALTQSRLKALVQSGMQLALDDFGTGYSSLAYLQEMDTDYLKIDKRFVDNINKGS 938 Query: 287 LTDIIATTIIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKL 346 ++ TII ++ QL + VIA+GIETK+Q ++E G Y +G S PLP + F+ L Sbjct: 939 QELVLCETIIVMAHQLGLKVIAEGIETKQQMQLLLEAGCDYGQGYLFSKPLPKEQFMSLL 998 Query: 347 LAS 349 S Sbjct: 999 TTS 1001 >UniRef50_C1M6U9 Rtn protein n=1 Tax=Citrobacter sp. 30_2 RepID=C1M6U9_9ENTR Length = 482 Score = 85.1 bits (209), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 81/337 (24%), Positives = 153/337 (45%), Gaps = 25/337 (7%) Query: 25 LSEIEIELLSQLLKGYSVNEISKRRNRSIKTVSCQKMKLYKKLNVKS-DLTLWRDVFLRF 83 L+E E E+L +++ + +IK+V + K+ +L + + T+ +FL Sbjct: 135 LTEFEEEMLYSSFTKEKLHDFCIANSLTIKSVYRYRDKITARLGFSNFNETV---IFLTR 191 Query: 84 KAYLQPKNIICDNFNSSVL-----PVVSSKGESMAHYN----IYYQPIYNAKNGNIAGCD 134 L +II +N N + V + SMA N Y+QPI N + G++ C Sbjct: 192 NNLLNESSIINNNVNGDAVYTDAYDVSDTSRLSMAIRNEEIIPYFQPIVNIR-GDV--CG 248 Query: 135 VTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINKLFSPIKNNLPHG-------FFI 187 V + + G +A+ S R + P K + + L + + NL G F+ Sbjct: 249 VEVLARWPQGHNYAI-SQR-EFIPLAEKSGLINELTSYLMTAVARNLVSGGASINKTLFV 306 Query: 188 TININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSLRRIRNNNV 247 + N++P + ECL+F+++ I+L+++ + + I + +R +RN V Sbjct: 307 SFNVSPSGLNNPVFYWECLNFMEITQGLPIKLMIEITENQTFTITPAIKELIRSLRNKGV 366 Query: 248 YLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSKQLHIDVI 307 +L+DFG GYA L +L + + + K+ +I+ + +I LS L + + Sbjct: 367 LFALDDFGTGYANLCYLNELDLDVIKIDKSFIKEIKEVDQYIPMLESITHLSGLLGLRTV 426 Query: 308 ADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVR 344 A+G+E Q ++ + V YL+G P+ + F+R Sbjct: 427 AEGVENDYQQQWLGKNNVDYLQGYQFLPPVTFNDFIR 463 >UniRef50_Q48AL8 GGDEF/EAL domain protein n=1 Tax=Colwellia psychrerythraea 34H RepID=Q48AL8_COLP3 Length = 588 Score = 85.1 bits (209), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 51/171 (29%), Positives = 96/171 (56%), Gaps = 7/171 (4%) Query: 180 NLPHGF-FITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSS 238 +LP F I INI+ + ++ D + L+ +K RL L+ + E ++ + S Sbjct: 420 SLPESFNKIAINISAKQLIQHDFQEIVLNAVKQNDIPAKRLALELT---ENLLVENIEDS 476 Query: 239 LRRI---RNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTI 295 ++ I + N + +++DFG GY+ L++L+ IP S + + ++ +I +S + IA+ I Sbjct: 477 IKLIASLKENAIDCAIDDFGTGYSSLTYLKRIPASVLKIDRSFVTNIAQSSESAAIASMI 536 Query: 296 IDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKL 346 I L K L++D++A+G+ET+++ + E G + +G S PLP D F + L Sbjct: 537 ISLGKTLNMDILAEGVETQEELNCLKELGCFHYQGFYFSGPLPFDEFAKLL 587 >UniRef50_A6UFR6 Diguanylate cyclase/phosphodiesterase n=15 Tax=Rhizobiales RepID=A6UFR6_SINMW Length = 564 Score = 85.1 bits (209), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 53/176 (30%), Positives = 92/176 (52%), Gaps = 9/176 (5%) Query: 180 NLPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSL 239 + P F + +N++P + L + + + G RL L+ + E ++ R ++L Sbjct: 384 DWPSHFTLAVNLSPAEFLHEGLTDRVAQTLDLVGMRADRLELEIT---ESVLLERTINNL 440 Query: 240 RRIRNNNVY---LSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTII 296 + NV +SL+DFG Y+ LS+L+N PF + + + D+E N I +II Sbjct: 441 DTLNTLNVLGVQISLDDFGTYYSSLSYLKNFPFDTIKIDQYFIKDLERNEKGQTIVRSII 500 Query: 297 DLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADA---FVRKLLAS 349 L+ L ++V A+G+ET QA ++ + G L+G L +P+ ADA F+RK A+ Sbjct: 501 ALAHGLGMNVTAEGVETAGQAAWLQKEGCDRLQGYFLGAPMAADAIGDFLRKASAT 556 >UniRef50_A8GGV3 Diguanylate phosphodiesterase n=11 Tax=Enterobacteriaceae RepID=A8GGV3_SERP5 Length = 528 Score = 85.1 bits (209), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 55/243 (22%), Positives = 113/243 (46%), Gaps = 12/243 (4%) Query: 108 KGESMAHYNIYYQPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLF 167 +G + I YQP+++ K G IAG + I ++ D I Y ++ + L Sbjct: 275 RGIKRNEFFIEYQPVFHTKTGTIAGLEALIRWQHPIEGRIPPDL-FIPYAESEGLIVPLT 333 Query: 168 GHINKLFSP----IKNNLPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQF 223 H+ +L + + LP G + +NI+P + ++ + LV + Sbjct: 334 RHLFRLIAEDAPRLATALPQGAKLGLNISPSHLSAPSFHQDVYELLAQLPGNYFTLVFEI 393 Query: 224 STK---EELYIIRRYQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFH 280 + + EE + + + + ++++DFG G++ L +LQ Y+ + + + Sbjct: 394 TERGMVEEGNALAEFD----WLHKQGIEIAIDDFGTGHSALIYLQRFSMDYLKIDRGFVN 449 Query: 281 DIESNSLTDIIATTIIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPAD 340 I +++T + +I L+K+L + +A+G+ET +Q ++ E+ V +++G S PL D Sbjct: 450 SIGRDTVTAPVLDAVISLAKKLKMQTVAEGVETAEQVSFLQEQDVNFMQGYYYSKPLSID 509 Query: 341 AFV 343 FV Sbjct: 510 NFV 512 >UniRef50_Q9HYT3 Uncharacterized signaling protein PA3311 n=9 Tax=Pseudomonas RepID=Y3311_PSEAE Length = 783 Score = 85.1 bits (209), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 59/243 (24%), Positives = 107/243 (44%), Gaps = 29/243 (11%) Query: 116 NIYYQPIYNAKNGNI----------------AGCDVTIALKNSDGSAFALDSDRINYNPN 159 ++YQPI +G + G D I L ++G LD + Sbjct: 533 ELHYQPILALADGEVHQLEALVRWRHPTQGLLGPDRFIGLAEANGMIDQLDDWVLRRACR 592 Query: 160 DNKVSYLFGHINKLFSPIKNNLPHGFFITININPEDILTCDIERECLHFIKVFGTERIRL 219 D + +L GH + +N ++ + E H ++ G L Sbjct: 593 DLRSLHLAGH-------------ERLRVAVNCCASNLGRASLVDEVRHALEQAGLAACFL 639 Query: 220 VLQFSTKEELYIIRRYQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMF 279 L+ + +Y I + L R+R V LS++DFG GY+ L++L+ +P + + ++ Sbjct: 640 ELEVTEDALMYNIDQTIPLLERLRELGVSLSIDDFGTGYSSLAYLRRLPLDALKVDRSFI 699 Query: 280 HDIESNSLTDIIATTIIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPA 339 DI ++ IA II ++++LH+ V+A+G+ET +Q ++ E + ++G S PLP Sbjct: 700 MDIPASQRDMEIAQAIIAMAQKLHLKVVAEGVETPQQLAFLRENHCELVQGYLFSRPLPL 759 Query: 340 DAF 342 A Sbjct: 760 AAL 762 >UniRef50_C6NR21 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Acidithiobacillus caldus ATCC 51756 RepID=C6NR21_9GAMM Length = 913 Score = 84.7 bits (208), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 55/235 (23%), Positives = 115/235 (48%), Gaps = 20/235 (8%) Query: 118 YYQPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINKLFS-- 175 ++QP+++ ++G + G + L+ DGS A + P + +F N++ Sbjct: 564 WFQPVWDQQSGRVVGIEALARLRGDDGSVLAPG----EFLPQLQETD-IFDLTNQILEQS 618 Query: 176 ----PIKNNLPHGFFITININPEDI-LTCDIERECLHFIKVFGTERI---RLVLQFSTKE 227 ++L ++++N++P+ I +TC +C+ ++ +RI R+V + Sbjct: 619 LTALTALDDLDPELWVSVNLDPQLIGITC---LKCVQ--QMLQGQRIAPQRIVFELLESG 673 Query: 228 ELYIIRRYQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSL 287 + R Q L ++ V L+L+D G GY+ L L+ +P + L ++ +E Sbjct: 674 DFLDRRLAQDHLLDLKAIGVRLALDDIGSGYSSLLRLKELPIDKIKLDQSFVRGLEERPG 733 Query: 288 TDIIATTIIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAF 342 +++LS L+++++A+G+ET + GV+YL+G A++ P+P DA Sbjct: 734 DLHFVEALLELSSSLNVELVAEGVETAAIRDAVAVAGVRYLQGYAIARPMPLDAL 788 >UniRef50_A1K4Z0 EAL/GGDEF/PAS/PAC-domain containing signalling protein n=2 Tax=Rhodocyclaceae RepID=A1K4Z0_AZOSB Length = 880 Score = 84.7 bits (208), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 59/239 (24%), Positives = 111/239 (46%), Gaps = 13/239 (5%) Query: 116 NIYYQPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGH--INKL 173 +Y+QP NA +G I GC+ + ++ D A R ++ + G + + Sbjct: 631 RLYFQPKVNAADGCIEGCEALLRWQHPDLGLLA--PGRFVPAAEESGLIVPIGEWVLREA 688 Query: 174 FSPIKNNLPHGFF---ITININPEDILTCDIE---RECLHFIKVFGTERIRLVLQFSTKE 227 ++ + G + +N++ + DI RE L ++ L L+ + Sbjct: 689 CRQLRAWIDAGLAPVPVAVNLSGQQFAHQDIVALVREALAEHRLPAP---MLELELTETM 745 Query: 228 ELYIIRRYQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSL 287 + + R ++L +R V L+++DFG GY+ L++L+ + + + ++ HDI S Sbjct: 746 LMRDLERTIATLAELRAMGVTLAIDDFGTGYSSLAYLRQFDVNALKIDRSFVHDIRPGSS 805 Query: 288 TDIIATTIIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKL 346 IAT +I L+ L + V A+G+ET Q ++ G L+G P PA+AF ++L Sbjct: 806 DGKIATAVIALAHNLGLTVTAEGVETAAQQHFLARHGCDQLQGFLFGQPEPAEAFAQRL 864 >UniRef50_Q07X30 Diguanylate cyclase/phosphodiesterase with GAF sensor n=1 Tax=Shewanella frigidimarina NCIMB 400 RepID=Q07X30_SHEFN Length = 620 Score = 84.7 bits (208), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 57/248 (22%), Positives = 120/248 (48%), Gaps = 35/248 (14%) Query: 119 YQPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYL--------FGHI 170 YQP + ++ N+ G +V I YNP +VS + G I Sbjct: 381 YQPFVDTQSQNVIGAEVLIRW----------------YNPTLGQVSPVDFIENAEQSGQI 424 Query: 171 NKL-FSPIKNNLPH----------GFFITININPEDILTCDIERECLHFIKVFGTERIRL 219 ++ + ++N L F++ INI+P + + + + ++++ L Sbjct: 425 IEIGYFVLRNALKQLAYWRELYNRDFYLAINISPVQLKDSYLIDKIVQLLELYKIPGNLL 484 Query: 220 VLQFSTKEELYIIRRYQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMF 279 ++ + ++ Q L ++ ++ + LSL+DFG GY+ LS+LQN PF+ V + ++ Sbjct: 485 EIELTENAFIHDATHAQEILNKLHHHGIRLSLDDFGTGYSSLSYLQNYPFNSVKIDRSFI 544 Query: 280 HDIESNSLTDIIATTIIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPA 339 ++E++ + + TII ++ L + ++A+G+E + QA ++ ++G +G L P+ A Sbjct: 545 RNLETSEQSRQLVNTIIAMANNLQLSLVAEGVENQFQADFVAKQGANIWQGYHLGKPVDA 604 Query: 340 DAFVRKLL 347 + F ++ L Sbjct: 605 NDFAQQYL 612 >UniRef50_C9YF35 Putative uncharacterized protein n=1 Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9YF35_9BURK Length = 849 Score = 84.7 bits (208), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 51/238 (21%), Positives = 112/238 (47%), Gaps = 8/238 (3%) Query: 111 SMAHYNIYYQPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKV----SYL 166 + + +++QPI + +G + + + ++ + +D I + ++ Sbjct: 459 AQQQFELHFQPIVDLSSGQVRKAEALLRWRHPKRGMIS-PADFIPVAEASELIVEIGDWV 517 Query: 167 FGHINKLFSPIKNNL-PHGFFITININPEDILT-CDIERECLHFIKVFGTERIRLVLQFS 224 F +++ ++ L PH F I++N +P C E+ + ++ G + LV++ + Sbjct: 518 FSEVSRQLLVWRDTLHPH-FQISMNSSPVQFRRRCPAEKSWVKRLEAMGLPGMSLVVEIT 576 Query: 225 TKEELYIIRRYQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIES 284 L L R+ + ++L+DFG GY+ L++LQ + Y+ + K+ ++ Sbjct: 577 EGLLLETNASVSEQLLEWRDAGIQVALDDFGTGYSSLAYLQQLDIDYIKIDKSFVQGLDP 636 Query: 285 NSLTDIIATTIIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAF 342 I+ ++ ++ L + V+A+G+ET +Q +IE G + +G S P+PADA Sbjct: 637 GGTQFILCKAMVVMAHALGLRVVAEGVETSQQRDLLIEAGCDFAQGYFFSRPMPADAL 694 >UniRef50_Q1ZST1 Putative uncharacterized protein n=2 Tax=Photobacterium RepID=Q1ZST1_PHOAS Length = 1022 Score = 84.7 bits (208), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 63/252 (25%), Positives = 112/252 (44%), Gaps = 30/252 (11%) Query: 114 HYNIYYQPIYNAKNGNIAGCDVTIALKNSDG--------------SAFALDSDRINYNPN 159 Y +YQP NA + G + + KN+ G S +D+ R Sbjct: 777 QYEYFYQPKVNANTHTLCGVEALLRWKNNKGEYRSPIDVIPILESSELIIDAGR------ 830 Query: 160 DNKVSYLFGHINKLFSPIKNNLPHGFF--ITININPEDILTCDIERECLHFIKVFGTERI 217 YL IN+ +K+ G F + INI+ +L D+ I G Sbjct: 831 -----YL---INQACLQLKSWQDKGHFFDVAINISARQLLEADLVETITQAINNTGCNPH 882 Query: 218 RLVLQFSTKEELYIIRRYQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKT 277 L L+ + + + L+ +R + ++++DFG GY+ L++L P + + + + Sbjct: 883 FLELELTESVLMCDVNFALKQLKSLRELGIKIAIDDFGTGYSSLAYLSRFPINILKVDRE 942 Query: 278 MFHDIESNSLTDIIATTIIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPL 337 D+ SN + I +II+L+ L++ ++A+G+ET+ Q ++ GV+ L+G PL Sbjct: 943 FIKDLPSNKDSITICRSIIELAHNLNLTIVAEGVETEDQLKFLESLGVEELQGYYFDKPL 1002 Query: 338 PADAFVRKLLAS 349 P F K LA+ Sbjct: 1003 PLSDFENKYLAT 1014 >UniRef50_UPI0001AEC58F hypothetical protein AmacA2_18780 n=1 Tax=Alteromonas macleodii ATCC 27126 RepID=UPI0001AEC58F Length = 517 Score = 84.3 bits (207), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 57/248 (22%), Positives = 113/248 (45%), Gaps = 12/248 (4%) Query: 107 SKGESMAHYNIYYQPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYL 166 SKG + YQP N ++G + GC+V ++ G + D D + Sbjct: 276 SKGLKEHKFYCLYQPFVNLESGKVIGCEVLSRFEDEFGPIYP-DEFIPQVKEQDMTWEFT 334 Query: 167 FGHINKLFSPIKNN--LPHGFFITININPEDILTCDIERE-CLH--FIKVFGTERIRLVL 221 I + N +P GF ++ N+ P D RE CL F+ + +LVL Sbjct: 335 VDMITTAMRELNENPEIPEGFKVSFNLFP-----FDFTREGCLDLDFVLDMNVKNFKLVL 389 Query: 222 QFSTKEELYIIRRYQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHD 281 + + E++ ++ +++ +++DFG+GY+ LS L+ + Y+ + ++ D Sbjct: 390 EITEDEQI-ATHSAVKHIKSLKSKGFLFAIDDFGVGYSNLSQLKTLNCDYLKIDRSFVMD 448 Query: 282 IESNSLTDIIATTIIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADA 341 +E NS+ + I+ +++ L++D+IA+G+E Q + + + +G P ADA Sbjct: 449 MEDNSIRSSLIPHIVSIAEGLNVDLIAEGVENIDQCNELKGLTIGFGQGWLFGKPQSADA 508 Query: 342 FVRKLLAS 349 + + + Sbjct: 509 LAKSVQGT 516 >UniRef50_A1U7E4 Diguanylate cyclase/phosphodiesterase n=1 Tax=Marinobacter aquaeolei VT8 RepID=A1U7E4_MARAV Length = 867 Score = 84.3 bits (207), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 53/227 (23%), Positives = 108/227 (47%), Gaps = 10/227 (4%) Query: 116 NIYYQPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYL--FGH--IN 171 ++YQP + ++G I G + I ++ + I++ P K + H I+ Sbjct: 619 ELHYQPKMDLRSGQIIGFEALIRWQHPERGWVP----PIDFIPLAEKTGVITQLTHWVID 674 Query: 172 KLFSPIK--NNLPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEEL 229 + S ++ + G + IN++ D+L+ +E + + E + ++ + + Sbjct: 675 QALSDLRTLQKIQPGLGMAINVSARDLLSAGLEEQFAQSLARHQLEAGHVTVELTETAAM 734 Query: 230 YIIRRYQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTD 289 + +L R+ + +S++DFG GY+ LS+L+ IP S + L +T+ HDI+++ Sbjct: 735 DDPEKGLEALGRLSALGLRISIDDFGAGYSSLSYLKQIPASELKLDRTLVHDIQASDSAR 794 Query: 290 IIATTIIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSP 336 +I T I + L V+A+G+E+ + A + G L+G L P Sbjct: 795 VIVETAITMGHTLGYQVVAEGVESGQDAARLKAMGADLLQGFCLCRP 841 >UniRef50_A5ERD3 Diguanylate cyclase/phosphodiesterase n=12 Tax=Bradyrhizobiaceae RepID=A5ERD3_BRASB Length = 902 Score = 84.3 bits (207), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 55/235 (23%), Positives = 104/235 (44%), Gaps = 7/235 (2%) Query: 113 AHYNIYYQPIYNAKNGNIAGCDVTIALK-----NSDGSAFALDSDRINYNPNDNKVSYLF 167 ++Y+QP A +G C I + + F SD I + + Sbjct: 651 GELSLYFQP--QASSGRTVDCSEIIGFEALARWHHPVRGFVPPSDFIPLAEESGMIVEMG 708 Query: 168 GHINKLFSPIKNNLPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKE 227 I + + P + +N++P + D+ + G RL L+ + Sbjct: 709 EWILREACREAASWPKPLQVAVNLSPAQFVHGDLVALVHSILLETGLSPGRLELEITEGV 768 Query: 228 ELYIIRRYQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSL 287 + R + LRR++ V +S++DFG GY+ LS+LQ PF + + + ++ N Sbjct: 769 LIEDFDRGVALLRRLKALGVRVSMDDFGSGYSSLSYLQAFPFDKIKIDRAFVMNLGRNPQ 828 Query: 288 TDIIATTIIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAF 342 + I +I L +++ ++A+G+ET +Q G++ E+G ++G L PLP D + Sbjct: 829 SAAIIRAVIGLGHGMNMSIVAEGVETPEQLGFLAEQGCDSVQGYLLGKPLPIDKY 883 >UniRef50_B9R1X0 Cyclic diguanylate phosphodiesterase domain protein n=1 Tax=Labrenzia alexandrii DFL-11 RepID=B9R1X0_9RHOB Length = 710 Score = 84.3 bits (207), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 44/153 (28%), Positives = 82/153 (53%), Gaps = 6/153 (3%) Query: 187 ITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQS---SLRRIR 243 + IN++P DI++ ++ G + RL ++ + E +I S +LR+IR Sbjct: 486 VAINMSPAQFAAGDIQKRVARALQSSGLDPKRLEIEIT---ESLLISNTDSVVHTLRQIR 542 Query: 244 NNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSKQLH 303 + V ++++DFG GY+ LS+L PF + + K D+ + TD I T+I+ L + L+ Sbjct: 543 DMGVSIAMDDFGTGYSSLSYLSLFPFDKIKIDKAFIQDLGKEASTDAIVTSIVGLGRSLN 602 Query: 304 IDVIADGIETKKQAGYMIERGVKYLKGIALSSP 336 + + A+G+ET++QA + G ++G P Sbjct: 603 VTITAEGVETEEQAILLRAAGCDLIQGYLYGKP 635 >UniRef50_B4SIA4 EAL domain protein n=4 Tax=Proteobacteria RepID=B4SIA4_STRM5 Length = 538 Score = 84.3 bits (207), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 60/236 (25%), Positives = 111/236 (47%), Gaps = 17/236 (7%) Query: 117 IYYQPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINKLFSP 176 ++YQPI G G + I + DG+ D + P + + G I L Sbjct: 280 LHYQPIIELDTGICVGAEALIRWQRQDGTQVRPDL----FIPLAEETG-MIGAITDLV-- 332 Query: 177 IKNNL---------PHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKE 227 I+N + I IN+ EDI + + + G ++ ++ +T+ Sbjct: 333 IENVVRDMRELLVADRSAHIAINLAAEDISSGRALKLIAKHMAGSGILPQQIWME-ATEH 391 Query: 228 ELYIIRRYQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSL 287 + R ++ L + R ++++DFG+G++ L +L+ +P + + K+ I + S Sbjct: 392 GFLDLDRARTMLAQARRAGHSVAIDDFGVGFSSLQYLEQLPLDALKIDKSFIDAIGTESA 451 Query: 288 TDIIATTIIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFV 343 T + IID++K+L + V+A+G+ET+ Q Y+ R V++ +G S PLP D FV Sbjct: 452 TSPVTPHIIDMAKELGLWVVAEGVETEAQLAYLHTRKVEFAQGWLFSRPLPRDEFV 507 >UniRef50_C5T9I2 Diguanylate cyclase/phosphodiesterase (Fragment) n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T9I2_ACIDE Length = 632 Score = 84.0 bits (206), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 35/106 (33%), Positives = 66/106 (62%) Query: 238 SLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIID 297 +L R+ ++L+++DFG GY+ L++L+ +P S + + ++ D+ + + I T I+ Sbjct: 522 TLHRLSQLGIHLAIDDFGTGYSSLAYLRQLPMSRLKIDRSFVKDLPAQEHSRTIVTAIVA 581 Query: 298 LSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFV 343 L+ L + V A+G+ET +QA Y++++G L+G + PLPA FV Sbjct: 582 LAHGLGLQVTAEGVETPQQAQYLVQQGCDVLQGYVFARPLPAPQFV 627 >UniRef50_B2I7U8 EAL domain protein n=12 Tax=Xanthomonadaceae RepID=B2I7U8_XYLF2 Length = 530 Score = 84.0 bits (206), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 55/235 (23%), Positives = 108/235 (45%), Gaps = 11/235 (4%) Query: 115 YNIYYQPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINKLF 174 + + YQPI + +G G + + + DG+ D + P + + +++ Sbjct: 288 FFVCYQPIVSLSDGRCVGAEALVRWRQQDGTLILPD----QFIPLAERSGLILPITDQVI 343 Query: 175 SPIKNNLP------HGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEE 228 + L I IN++ +DI + + ++ G R +L ++ +T+ Sbjct: 344 AASMRELGPLLVADRSLHIAINVSVKDIESGRLLDVLALALQDTGLYRKQLWIE-ATERS 402 Query: 229 LYIIRRYQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLT 288 R + + R+R + ++DFG GY+ L +LQ +P + + K+ + + Sbjct: 403 FMDARAAREHIVRLREAGYAVVIDDFGTGYSNLQYLQQLPLDALKIDKSFIDTVGRDVTN 462 Query: 289 DIIATTIIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFV 343 +A+ IID++K+L + IA+G+E ++Q Y+ RGV +G SSPL FV Sbjct: 463 TAVASHIIDIAKELGMRTIAEGVEREEQLVYLRARGVDMAQGWLFSSPLSVAEFV 517 >UniRef50_C1D1W4 Putative diguanylate-cyclase n=1 Tax=Deinococcus deserti VCD115 RepID=C1D1W4_DEIDV Length = 856 Score = 84.0 bits (206), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 64/304 (21%), Positives = 132/304 (43%), Gaps = 19/304 (6%) Query: 55 TVSCQKMKLYKKLNVKSDLTLWR-----DVFLRFKAYLQPKNIICDNFNSSVLPVVSSKG 109 +VS Q + + L +DL ++R F F+A L + + S + + G Sbjct: 553 SVSPQAGRDGQTLLRHADLAMYRAKREKSGFAVFEAQLNQQAQLRLQLASDLREALREPG 612 Query: 110 ESMAHYNIYYQPIYNAKNGNIAGCDVTIALKN------SDGSAFALDSDRINYNPNDNKV 163 A+ ++YQP +G + G + + ++ S + D P V Sbjct: 613 ---ANLELHYQPQVRLHDGQVVGAEALVRWRHPHLGMVSPAQFIPVAEDTGMIVPLGTWV 669 Query: 164 SYLFGHINKLFSPIKNNLPHGFF-ITININPEDILTCDIERECLHFIKVFGTERIRLVLQ 222 ++ HG + +N++ D ++ G E RL ++ Sbjct: 670 MEEACRQAVAWAAAG----HGAMRVAVNVSALQFARPDFVDTVSATLRATGLEAGRLEVE 725 Query: 223 FSTKEELYIIRRYQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDI 282 + + ++ + R+R V ++++DFG GY+ LS+LQ +P + + + +T ++ Sbjct: 726 LTESAVMEDVKESVERMERLRALGVSVAVDDFGTGYSSLSYLQRLPLNVLKIDRTFIQNL 785 Query: 283 ESNSLTDIIATTIIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAF 342 N+ + + I+ L++ L+++ +A+G+ET + +IE G +Y +G + PLPA A Sbjct: 786 GVNATSRSVVQAIVGLAQHLNLECVAEGVETPDEREALIEVGCRYAQGFFFAKPLPAPAL 845 Query: 343 VRKL 346 + L Sbjct: 846 LEWL 849 >UniRef50_C6PSS6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Clostridium carboxidivorans P7 RepID=C6PSS6_9CLOT Length = 916 Score = 84.0 bits (206), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 63/250 (25%), Positives = 119/250 (47%), Gaps = 35/250 (14%) Query: 114 HYNIYYQP--IYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHIN 171 +N+Y QP I+ I G + I K DG F D + P N Sbjct: 675 EFNLYLQPQIIFAENEFKIIGAEALIRWKTIDGKIFTPDK----FIP--------VSETN 722 Query: 172 KLFSPIKNNLPHGFF--------------ITININPEDILTCDIERECLHFIKVFGTERI 217 ++ PI N + F ++INI+ + ++ + K ++ I Sbjct: 723 RMIIPIGNWILEEIFRIDKVLKDNGINIKLSINISSKQFENGNLVSKIKELFKENDSQNI 782 Query: 218 RLVLQFSTKEELYIIRRYQS---SLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNL 274 LV++ + E ++++ +S SL I+ + +S++DFG G++ LS+L +P Y+ + Sbjct: 783 DLVIEIT---ESFLLQDTESAIQSLLEIKKLGIEISIDDFGTGFSSLSYLARLPVDYLKI 839 Query: 275 HKTMFHDIESNSLTDIIATTIIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALS 334 K+ DI S + + + + II ++K L++ +A+G+ET++QA +++ G L+G S Sbjct: 840 DKSFIDDILSTNHKN-LTSNIISMAKTLNLKTVAEGVETEEQANRLMDEGCDELQGYYFS 898 Query: 335 SPLPADAFVR 344 PL D F++ Sbjct: 899 KPLIIDDFIK 908 >UniRef50_Q1N7J4 Putative uncharacterized protein n=1 Tax=Sphingomonas sp. SKA58 RepID=Q1N7J4_9SPHN Length = 653 Score = 83.6 bits (205), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 55/231 (23%), Positives = 111/231 (48%), Gaps = 5/231 (2%) Query: 111 SMAHYNIYYQPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHI 170 S N+ +QPI + +G+I C+ + ++ S+ I N + + G + Sbjct: 397 SGGELNLMFQPIVDLNSGHIEACEALLRWEHPVLGPIP-PSEFIPIAENMGLIEAMTGWV 455 Query: 171 NKLFSPIKNNLPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELY 230 + + P + INI+P + + ++ + + G RL L+ + E ++ Sbjct: 456 LRRACEVAAQWPEHVRVAINISPASLKSPELPGNVIAALLETGVSARRLELEVT--ESIF 513 Query: 231 IIRRYQSS--LRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLT 288 + Q++ LR ++ + L+L+DFG GY+ L++L++ F + + ++ + +N+ Sbjct: 514 LDDSGQTNAILRELQRIGLRLALDDFGTGYSSLAYLRSYRFDTLKVDQSFMAGVSANAED 573 Query: 289 DIIATTIIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPA 339 I I L++ L +D +A+GIET Q G+ E G ++G S P+PA Sbjct: 574 RAIVKAIGSLARDLSMDTVAEGIETVDQLGHAREAGFTNVQGYLFSRPVPA 624 >UniRef50_C6XAG8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6XAG8_METSD Length = 950 Score = 83.6 bits (205), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 47/187 (25%), Positives = 94/187 (50%) Query: 166 LFGHINKLFSPIKNNLPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFST 225 ++ +L + L + +N++ + + D + + + V G RL L+ + Sbjct: 763 MYAACKQLVLWAQQPLTSSLTLAVNVSAKQLRQMDFVDQIVEVLNVTGANPKRLKLELTE 822 Query: 226 KEELYIIRRYQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESN 285 + I + + ++N V S++DFG+GY+ LS+L+ +P + + ++ D+ ++ Sbjct: 823 SLMVNNIEDVIAKMTELKNIGVGFSIDDFGIGYSSLSYLKLLPLDQLKIDQSFVRDVLTD 882 Query: 286 SLTDIIATTIIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRK 345 +IA TII L K L++ VIA+G+ET Q ++ G +G S P+PAD F R Sbjct: 883 PNDAVIARTIIALGKSLNLQVIAEGVETLSQREFLDNYGCDAYQGYLFSKPVPADEFERD 942 Query: 346 LLASLKQ 352 ++ + + Sbjct: 943 VVQTFEH 949 >UniRef50_B8GMU1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GMU1_THISH Length = 862 Score = 83.6 bits (205), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 51/234 (21%), Positives = 110/234 (47%), Gaps = 7/234 (2%) Query: 111 SMAHYNIYYQPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHI 170 + + ++YQP + ++G I G + + ++ + ++ I + + L + Sbjct: 623 ELGQFQVHYQPQMDLRSGRICGVEALVRWQHPE-RGLVPPAEFIPMAEDTGLIEPLGEWV 681 Query: 171 -----NKLFSPIKNNLPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFST 225 ++ LP +++N++P D+ + G E RL L+ + Sbjct: 682 LRTAAREVRGWQDRGLP-ALNLSVNLSPRQFRHPDLPGMVERVLAESGLEAERLELEITE 740 Query: 226 KEELYIIRRYQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESN 285 + + + +L RI V +S++DFG G++ L++L+ +P + + + I + Sbjct: 741 RLIIVDLEHTVDTLSRIARLGVRVSIDDFGTGHSSLAYLKRLPVHALKIDREFVDGIGQD 800 Query: 286 SLTDIIATTIIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPA 339 S IA +I L + L + VIA+G+ET++QA ++ E G ++G ++ P+PA Sbjct: 801 SDDAAIAEAVIALGRTLRLQVIAEGVETREQASFLREHGCDAVQGFFIARPMPA 854 >UniRef50_Q1Z8Q2 Putative uncharacterized protein n=2 Tax=Photobacterium profundum RepID=Q1Z8Q2_PHOPR Length = 517 Score = 83.6 bits (205), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 57/253 (22%), Positives = 126/253 (49%), Gaps = 7/253 (2%) Query: 96 NFNSSVLPVVSSKGESMAHYNIYYQPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRIN 155 NF S+ + +G + ++ YYQPI N+K+G+ G ++ + + + ++ I+ Sbjct: 239 NFRRSIKSDIQ-RGINNREFHAYYQPIVNSKSGHWIGAELLVRWLHPKHGVIS-PAEFIH 296 Query: 156 YNPNDNKVSYLFGHINKLFSPIKNNLP---HGFFITININPEDILTCDIERECLHFIKVF 212 + ++ + H+ + + K + +I+IN+ I+ E + I + Sbjct: 297 TAESTGLINTITLHLLERVAYEKTQIQAENDDLYISINVTASMIINSRYVTELICIISKY 356 Query: 213 GTERIRLVLQFSTKEELYIIR--RYQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFS 270 + + +V +F+ +E + ++R+R + +L+DFG GYA LS LQ++ F Sbjct: 357 PSLQHNVVFEFTERETFSPTELVELKLGMQRLREVGIKWALDDFGTGYAGLSTLQSLRFD 416 Query: 271 YVNLHKTMFHDIESNSLTDIIATTIIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKG 330 + + +T ++++T I I ++ LH ++A+G+ET +QA Y+ + G++ +G Sbjct: 417 ILKIDRTFVASSVTDAVTHSILDNIAEMGHTLHCTMVAEGVETAEQAEYVDDLGIEASQG 476 Query: 331 IALSSPLPADAFV 343 + P+P D ++ Sbjct: 477 YFYAKPMPFDDYL 489 >UniRef50_D1B535 Diguanylate cyclase n=1 Tax=Sulfurospirillum deleyianum DSM 6946 RepID=D1B535_SULD5 Length = 1196 Score = 83.6 bits (205), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 57/233 (24%), Positives = 115/233 (49%), Gaps = 16/233 (6%) Query: 117 IYYQPIYNAKNGNIAGCDVTIALKNSDGSAF------ALDSDRINYNPNDNKVSYLFGHI 170 ++YQPIY+ + I G + + + F ++ ++ + N +F I Sbjct: 960 MHYQPIYDLQKKEIIGLEALMRWNYKGVTYFPDTFLSVMEETKMIAEASSNLFISVFHFI 1019 Query: 171 NKLFSPIKNNLPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELY 230 KL + L F++INI+P + +H ++ T R +LV E L+ Sbjct: 1020 KKLNEALGREL----FVSINISPVQFSVAPFQESLIHALEA-STLRAQLVC-LEVTESLF 1073 Query: 231 I--IRRYQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLT 288 + I L ++ ++L+DFG GY+ L +L+ +P + + L + D+ +S + Sbjct: 1074 LENIEEVSQKLAALKTYGFCIALDDFGSGYSSLQYLKVLPLNKLKLDRIFVQDL-PDSQS 1132 Query: 289 DI-IATTIIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPAD 340 DI I +++ L K +++VI +G+ET++Q ++ + G +Y++G +S P+P + Sbjct: 1133 DIAITQSVLALGKNFNVNVIVEGVETEEQCKFLEQIGCRYIQGYLISKPMPEE 1185 >UniRef50_D0IUW1 Diguanylate cyclase/phosphodiesterase with n=3 Tax=Comamonadaceae RepID=D0IUW1_COMTE Length = 900 Score = 83.6 bits (205), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 58/241 (24%), Positives = 106/241 (43%), Gaps = 9/241 (3%) Query: 112 MAHYNIYYQPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDR-INYNPNDNKVS----YL 166 + H +YYQP G + G + L+ D + R I N + ++ Sbjct: 647 LGHMRLYYQPQIELATGRLVGAEAL--LRWLDPEEGLISPARFIPVAENSGVIGPLGLWV 704 Query: 167 FGHINKLFSPIKN-NLPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFST 225 G + + LP I +N++ L DI + G L L+ + Sbjct: 705 LGEACRQGQQWRAAGLPD-LAIAVNVSLHQFLLTDIAGATAEALNKSGFPASLLELEITE 763 Query: 226 KEELYIIRRYQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESN 285 + L R+R + L+++DFG GY+ L+HL+ P + + + DI + Sbjct: 764 SALAEKPEEALAVLNRLRELGLRLAIDDFGTGYSSLAHLKRFPLDLLKIDQGFIRDIPHS 823 Query: 286 SLTDIIATTIIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRK 345 + I++++I L + + V+A+G+ET++Q ++ ++G Y +G S PLPA+ F R Sbjct: 824 ADDMTISSSVIALGHAMGLKVLAEGVETQEQLSFLQQKGCDYFQGYFCSRPLPAEDFTRL 883 Query: 346 L 346 L Sbjct: 884 L 884 >UniRef50_Q3SG75 Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) n=1 Tax=Thiobacillus denitrificans ATCC 25259 RepID=Q3SG75_THIDA Length = 954 Score = 83.6 bits (205), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 55/239 (23%), Positives = 110/239 (46%), Gaps = 9/239 (3%) Query: 116 NIYYQPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKV-----SYLFGHI 170 ++YQP+ G+I G + L+ +D A A+ D D + ++ G Sbjct: 704 QVHYQPLVRLDTGHICGAEAL--LRWNDPEAGAIPPDHFIALAEDTGLIVPIGEWVVGEA 761 Query: 171 NKLFSPIKNN--LPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEE 228 + + LP F + +N++ + +L D+ G R+VL+ + Sbjct: 762 CEALKRWETEILLPADFALHVNLSGKQLLQKDLPTRLSDAFTRAGVSPARVVLELTESSI 821 Query: 229 LYIIRRYQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLT 288 + + + +R V ++++DFG G++ LS L+ +P S + + ++ DI +S Sbjct: 822 MESEATGVAVMTALREFGVEIAIDDFGTGHSSLSRLKLLPISELKIDRSFIRDIAVDSDD 881 Query: 289 DIIATTIIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLL 347 I I+ LS +L + VIA+G+E +Q ++++ G +G + P+P D +R L+ Sbjct: 882 AAIVQAILALSAKLGLGVIAEGVEHAEQEAFLMQHGCLRAQGYRYARPMPEDELIRLLV 940 >UniRef50_D0HE44 GGDEF family protein n=5 Tax=Vibrio RepID=D0HE44_VIBMI Length = 674 Score = 83.6 bits (205), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 39/108 (36%), Positives = 64/108 (59%) Query: 239 LRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDL 298 L R+ V LSL+DFG GYA +L+ PF + + K+ IE + I +++ + Sbjct: 556 LNRLHGLGVTLSLDDFGTGYASFQYLKKFPFDGIKIDKSFLEQIEHSENDQEIVRSMLHV 615 Query: 299 SKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKL 346 +K+L + V+A+GIETK+Q +++E G +G P+P+DAF +KL Sbjct: 616 AKKLKLKVVAEGIETKQQEQFILEHGCDIGQGFLYGRPMPSDAFEQKL 663 >UniRef50_B8H3B9 Sensory box/GGDEF family protein n=5 Tax=Caulobacteraceae RepID=B8H3B9_CAUCN Length = 748 Score = 83.2 bits (204), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 51/234 (21%), Positives = 105/234 (44%), Gaps = 1/234 (0%) Query: 113 AHYNIYYQPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINK 172 + ++YQP+Y+ + + GC+ + ++ + +D I + L + + Sbjct: 465 GEFELFYQPLYHLGDERVTGCEALLRWRHPE-RGMVSPADFIPLAEEIGLIVQLGEWVLR 523 Query: 173 LFSPIKNNLPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYII 232 N P + +N++P + R + + G RL L+ + L Sbjct: 524 RACAEAANWPEHVRLAVNLSPAQFRDRGLVRTVVSALAASGLPAQRLELEITESVLLQDS 583 Query: 233 RRYQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIA 292 + + L ++ V +S++DFG GY+ LS+L++ PF + + +T DI +S I Sbjct: 584 QANMTMLHDLKALGVRISMDDFGTGYSSLSYLRSFPFDKIKIDQTFVRDILHDSDAMAII 643 Query: 293 TTIIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKL 346 ++DL + + A+G+ET+ Q + ++G ++G +S P PA + L Sbjct: 644 KAVLDLGASMGVVTTAEGVETQAQLDALRQQGCAEIQGYFISRPAPASEIAKML 697 >UniRef50_B5Y0R4 Cyclic diguanylate phosphodiesterase (EAL) domain protein n=6 Tax=Enterobacteriaceae RepID=B5Y0R4_KLEP3 Length = 519 Score = 83.2 bits (204), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 60/238 (25%), Positives = 117/238 (49%), Gaps = 23/238 (9%) Query: 116 NIYYQPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHI-NKLF 174 +YYQPI + ++G IAG + + DG+ + D I ++ L I K+F Sbjct: 285 QVYYQPIISLQDGKIAGAEALARWQQPDGTFLSPDI-FIPLAEQTGLITQLTEDIVRKIF 343 Query: 175 S---PIKNNLPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTK----- 226 + P P I+IN++ +D+ + + ++ +G +++L+ + + Sbjct: 344 TDLGPWLRQRPE-VHISINLSVDDLRSPTLPTLLHDQLQHWGIAAEQIILEITERGFVDP 402 Query: 227 -EELYIIRRYQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESN 285 + +I Y+ + RI S++DFG GY+ LS+LQ + + + K+ +E Sbjct: 403 ETTMPVIAHYRQAGHRI-------SIDDFGTGYSSLSYLQKLDVDTLKIDKSFVDTLEYR 455 Query: 286 SLTDIIATTIIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFV 343 LT II+++K L++ +A+G+ET+ Q ++ + GV+Y +G S LP + F+ Sbjct: 456 PLT----PHIIEMAKALNLATVAEGVETESQRDWLRQHGVQYAQGWLYSKALPKEQFI 509 >UniRef50_Q31E09 Diguanylate cyclase/phosphodiesterase n=1 Tax=Thiomicrospira crunogena XCL-2 RepID=Q31E09_THICR Length = 665 Score = 83.2 bits (204), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 58/237 (24%), Positives = 111/237 (46%), Gaps = 14/237 (5%) Query: 114 HYNIYYQPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYL--FGH-- 169 + +Y+QP +G++ G + + N +D I P K + GH Sbjct: 424 EFELYFQPKICVNDGSVVGAEALVRW-NDPKKGLVPPNDFI---PAAEKTGLMVPLGHWV 479 Query: 170 ----INKLFSPIKNNLPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFST 225 I + + + L I+IN++P +L +R+ I G + +L ++ + Sbjct: 480 LKTAIQQQVTWKEQGLA-DLQISINLSPVQLLDTLFDRKLQALINQSGVDPTKLDIEMTE 538 Query: 226 KEELYIIRRYQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESN 285 + + + SL +R + +SL+DFG GY+ L++L+ P + + KT D + Sbjct: 539 SQFMENTEQNLHSLSTMRKQGINISLDDFGTGYSSLAYLKKFPIDTLKIDKTFIDDYATE 598 Query: 286 SLTDIIATTIIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAF 342 S I TI+ ++ L+++V+A+GIE + Q Y+++ G + +G S+PLP F Sbjct: 599 S-GAIFIETIVKIAHTLNLNVVAEGIEQEAQLNYLVQTGCETYQGYYCSAPLPVSEF 654 >UniRef50_B2VIJ7 Rtn protein n=9 Tax=Enterobacteriaceae RepID=B2VIJ7_ERWT9 Length = 539 Score = 83.2 bits (204), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 52/234 (22%), Positives = 107/234 (45%), Gaps = 6/234 (2%) Query: 108 KGESMAHYNIYYQPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLF 167 +G +++ YQPI + G + + + D+ I+Y N + L Sbjct: 275 QGIRRGEFHVEYQPIIATGSDTAYGLEALMRWVHPTEGRVPADA-FISYAEGQNLIVPLT 333 Query: 168 GHINKLFSPIKNNL----PHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQF 223 H+ L + + L P G + IN++P + D ++ ++ + + V + Sbjct: 334 RHLFALIARDAHQLCKVVPVGTKLGINLSPSHLTNPDFRKDVRQWLAMMPVDHFEYVFEI 393 Query: 224 STKEELYIIRRYQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIE 283 T+ + I N+ ++++DFG G++ L +L+ F Y+ + + I Sbjct: 394 -TERTMVSESNADEMFDWIHQQNIKIAIDDFGTGHSALLYLEKFHFDYLKIDRGFVQSIG 452 Query: 284 SNSLTDIIATTIIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPL 337 ++T + T++ L+++L + +A+G+ET QA ++I RGV +L+G S PL Sbjct: 453 MKTVTSPVLDTVLTLARELKLKTVAEGVETNAQAQWLINRGVTHLQGYFYSRPL 506 >UniRef50_Q3SJ51 Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) n=1 Tax=Thiobacillus denitrificans ATCC 25259 RepID=Q3SJ51_THIDA Length = 738 Score = 83.2 bits (204), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 52/233 (22%), Positives = 108/233 (46%), Gaps = 14/233 (6%) Query: 116 NIYYQPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYL--------F 167 ++YQP+ +A N +A + D + +D I N + + Sbjct: 493 EVHYQPVMDAANPRCPVSVEALARWHDDKYGWVNPADFIPLAENMGLIHEVGRQVLEQAL 552 Query: 168 GHINKLFSPIKNNLPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKE 227 H +K +NN + +N++ +++ D L ++ FG ++ L+ + Sbjct: 553 DHFSK-----RNNTCDALKLAVNVSKRQLMSPDFYPTLLATVERFGVHPRQIKLEITESI 607 Query: 228 ELYIIRRYQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSL 287 L I R ++ L+R+ + LSL+DFG G++ LSH+ +PF + + + I++ Sbjct: 608 ALEGIERARALLQRLSDAGFTLSLDDFGTGFSSLSHVHELPFDEIKIDISFVRRIKTPE- 666 Query: 288 TDIIATTIIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPAD 340 ++ TI+D+ + + ++A+G+E + A + GV+ L+G S P+P + Sbjct: 667 GRVLVKTIVDMGHAMRLALVAEGVEDSETAAILQGMGVEMLQGYHFSRPMPKE 719 >UniRef50_C3X4A6 Signal transduction protein n=2 Tax=Oxalobacter formigenes RepID=C3X4A6_OXAFO Length = 733 Score = 83.2 bits (204), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 56/228 (24%), Positives = 109/228 (47%), Gaps = 8/228 (3%) Query: 117 IYYQPIYNAKNGNIAGCDVTIALKNSD-----GSAFALDSDRINYNPNDNKVSYLFGHIN 171 +YYQP K G IAG + I + S F + +++I + + L Sbjct: 488 MYYQPRLCLKTGQIAGLEALIRWDHPKKGILPASEFIVLAEKIGLIHRIGEFA-LDNVTR 546 Query: 172 KLFSPIKNNLPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYI 231 +L + K + P + IN++ ++ +++ ++ G L+ + + + Sbjct: 547 QLIAWQKQDRP--IPVAINVSSSELYGAKLKKALSGILRETGLASRLFELEITESKLIED 604 Query: 232 IRRYQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDII 291 + R + +L+ IR+ + +S++DFG GY+ LS+L +P Y+ + + D+ N I Sbjct: 605 LDRVRHTLKEIRDMGIAISIDDFGTGYSSLSYLSALPVDYLKIDSSFIADVTQNHNVASI 664 Query: 292 ATTIIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPA 339 T I L+ L++ VIA+G+ET +Q +++ ++G S PLPA Sbjct: 665 VETTIRLAHSLNMQVIAEGVETPEQLQFLVAHECDQIQGYLCSRPLPA 712 >UniRef50_C6XAD3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6XAD3_METSD Length = 751 Score = 82.8 bits (203), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 58/235 (24%), Positives = 109/235 (46%), Gaps = 7/235 (2%) Query: 114 HYNIYYQPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINKL 173 + +YYQP + + G + G + I ++ A DR D+ + G Sbjct: 509 EFVLYYQPKIDIRTGQVVGAEALIRWQHPSWGLVA--PDRFIPIAEDSGLIRPIGLWVMR 566 Query: 174 FSPIKNNLPHG-----FFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEE 228 + +N + +N++ + + +E + + G E L L+ + Sbjct: 567 EACRQNQEWQAAGLARIPVAVNLSTVQLRQHNFLQEVSEILLMSGLEPDYLELEVTESVA 626 Query: 229 LYIIRRYQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLT 288 ++ + L ++R+ V L+L+DFG GY+ LS+L+ +P + V + K+ DIE++ Sbjct: 627 IHAETEVINWLHKLRSMGVKLALDDFGTGYSSLSYLKRLPINNVKIDKSFIRDIETDPDD 686 Query: 289 DIIATTIIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFV 343 I T II +S L ++VIA+G+E Q ++ + G ++G S P+PAD F Sbjct: 687 ATIITAIIRMSHGLRLNVIAEGVENINQLEFLKKEGCDQMQGFIASRPVPADEFA 741 >UniRef50_B1XYS1 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Leptothrix cholodnii SP-6 RepID=B1XYS1_LEPCP Length = 784 Score = 82.8 bits (203), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 43/146 (29%), Positives = 77/146 (52%), Gaps = 4/146 (2%) Query: 187 ITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQS--SLRRIRN 244 + +N++P + + + G +L L+ + E +I RR S LR ++ Sbjct: 605 VAVNLSPRNFQDPGLPARVRQLLDRHGLRGDQLTLELT--ESAWIDRRADSLDKLRALQA 662 Query: 245 NNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSKQLHI 304 V L+++DFG G + LSHL +P + L ++ HDIE ++ +A ++ + + L + Sbjct: 663 LGVGLAMDDFGNGQSSLSHLHRLPLRQLKLDRSFVHDIEHLAVAQTLAAAMLHIGESLGL 722 Query: 305 DVIADGIETKKQAGYMIERGVKYLKG 330 V+A+GIET QA ++IE G L+G Sbjct: 723 IVVAEGIETAAQAAFLIEHGCPVLQG 748 >UniRef50_A3WM41 Signaling protein with a ligand binding sensor domain, GGDEF and EAL domains n=2 Tax=Idiomarina RepID=A3WM41_9GAMM Length = 741 Score = 82.8 bits (203), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 39/128 (30%), Positives = 78/128 (60%), Gaps = 2/128 (1%) Query: 221 LQFSTKEELYI--IRRYQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTM 278 ++ E+++I I+ + + + +R + + L+++DFG+GY+ LS+L+N P + + + ++ Sbjct: 601 IELELTEQVFIENIQSHTNFMHSVREHGMSLAIDDFGVGYSSLSYLKNFPVTSLKIDRSF 660 Query: 279 FHDIESNSLTDIIATTIIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLP 338 D+ N +I TII+L+K L+I ++A+GIET +Q +++ R +G S P+P Sbjct: 661 VRDLPDNEDDAVIVQTIINLAKNLNIQLVAEGIETSEQVEFLLSRDCGIGQGYLFSRPVP 720 Query: 339 ADAFVRKL 346 AD + L Sbjct: 721 ADEITQLL 728 >UniRef50_A5ETG3 Diguanylate cyclase/phosphodiesterase n=6 Tax=cellular organisms RepID=A5ETG3_BRASB Length = 671 Score = 82.8 bits (203), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 52/231 (22%), Positives = 104/231 (45%), Gaps = 11/231 (4%) Query: 116 NIYYQPIYNAKNGNIAGCDVTIALKNS-----DGSAFALDSDRINYNPNDNKVSYLFGHI 170 + +QPI +A + G +V ++ SAF ++RI +V + Sbjct: 421 ELAFQPIVDAASARTTGFEVLARWRSPKLGLVSPSAFIPAAERIGVIRTLTRVLLV---- 476 Query: 171 NKLFSPIKNNLPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELY 230 K + + P ++ N++ DI + D + I G R+ + + + Sbjct: 477 -KALAAART-WPEDIRMSFNLSAHDICSPDGILPLISVIHASGVPPRRIEFEITETAVTF 534 Query: 231 IIRRYQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDI 290 + S+ ++ +SL+DFG GY+ LSH+ +P + + ++ HD+ +N ++ Sbjct: 535 DFVHAEQSISALKAIGCGISLDDFGTGYSSLSHVHRLPLDKLKVDRSFVHDVNANPISHK 594 Query: 291 IATTIIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADA 341 I ++ L + I + +G+ETK+Q + G Y++G + P+PADA Sbjct: 595 IIKSLTGLCADMEISCVVEGVETKEQLDSLRRLGADYIQGYYFAEPMPADA 645 >UniRef50_A8GFM2 EAL domain protein n=2 Tax=Serratia RepID=A8GFM2_SERP5 Length = 538 Score = 82.4 bits (202), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 60/241 (24%), Positives = 114/241 (47%), Gaps = 20/241 (8%) Query: 111 SMAHYNIYYQPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHI 170 S + +Y QPI NA+ G G ++ + KN + D + P + + Sbjct: 279 SRREFRVYCQPIINAETGRCVGVEMLLRWKNKRQGWISPDV----FIPLAEQHGLIIALT 334 Query: 171 NKLFSPIKNNL----PH-GFFITININPEDI----LTCDIERECLHFIKVFGTERIRLVL 221 L S + NL P F+I+IN+ E + DI R L L+L Sbjct: 335 RYLMSTVVENLQLFPPRPSFYISINVAAEHFNGVTIIDDIRRLWLP-----AHPMPSLML 389 Query: 222 QFSTKEELYIIRRYQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHD 281 + + + L I+ Q ++ ++ + L+++DFG G++ LS+L+ + + + + Sbjct: 390 ELTERTALSEIQYEQ--IKTLKEMGIMLAIDDFGTGHSSLSYLKKLSPDVLKIDRGFTAA 447 Query: 282 IESNSLTDIIATTIIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADA 341 I ++++ + TII L+ +L + ++A+G+ET +QA Y+ R V L+G + P+P + Sbjct: 448 IGTDAINATVTDTIITLAHRLKLKLVAEGVETAEQADYLRSRDVNALQGFYFAKPMPINV 507 Query: 342 F 342 F Sbjct: 508 F 508 >UniRef50_Q3SJE6 Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) n=1 Tax=Thiobacillus denitrificans ATCC 25259 RepID=Q3SJE6_THIDA Length = 758 Score = 82.4 bits (202), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 56/233 (24%), Positives = 110/233 (47%), Gaps = 7/233 (3%) Query: 117 IYYQPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHI-NKLFS 175 ++YQPI +G I G + + ++ + + S I + + L + + Sbjct: 506 LHYQPIVELASGRIVGGEALVRWEDPE-RGLVMPSAFIPAAEDTGLIVALSDWVLEACCT 564 Query: 176 PIKNNLPHG-----FFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELY 230 ++ G +++NI+ + R + G L L+ + L Sbjct: 565 QLRAWQQQGRAADDLTLSVNISTRQFEGEHLTRAVDRALARSGLRPDCLELEITENVMLV 624 Query: 231 IIRRYQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDI 290 + ++ L +R V L+L+DFG GY+ LS+L +PF + + ++ I ++ Sbjct: 625 MTDEVRTCLDALRARGVRLALDDFGTGYSSLSYLSQLPFHGLKIDQSFVRKIPAHPSETQ 684 Query: 291 IATTIIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFV 343 I TTI+ L++ L ++V+A+GIET +Q ++ +RG ++ +G +S+P ADAF Sbjct: 685 IVTTILALARGLGMEVVAEGIETAQQYAFLRDRGCEFGQGNLMSTPQAADAFA 737 >UniRef50_Q47HF3 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Proteobacteria RepID=Q47HF3_DECAR Length = 994 Score = 82.4 bits (202), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 42/162 (25%), Positives = 84/162 (51%) Query: 187 ITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSLRRIRNNN 246 + +N++P D+ + H + G L L+ + + I + ++++ Sbjct: 684 VAVNLSPRQFRQADLPAQVAHALAESGLPAGALELEITESAFIDDIDDAVAMCSKLKSLG 743 Query: 247 VYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSKQLHIDV 306 + LSL+DFG GY+ L+++ PF + + ++ DI +N + IA+ I + + L++ V Sbjct: 744 IKLSLDDFGTGYSSLAYVSRFPFDKIKIDQSFVRDIVNNPVNAAIASAAIVMGRSLNLSV 803 Query: 307 IADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLLA 348 +A+G+ET+ QA ++ R ++G S PLP + F LL+ Sbjct: 804 LAEGVETEAQAAFLRSRRCDAIQGYLFSRPLPPEEFAPLLLS 845 >UniRef50_Q2IV14 Diguanylate cyclase/phosphodiesterase n=4 Tax=Rhodopseudomonas palustris RepID=Q2IV14_RHOP2 Length = 673 Score = 82.4 bits (202), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 46/162 (28%), Positives = 85/162 (52%), Gaps = 6/162 (3%) Query: 180 NLPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSS- 238 + P I +N++P D D+ L + G + RL ++ + E +I + + Sbjct: 494 SWPKPLAIAVNLSPLDFGRLDVPALILQVLLETGLDPKRLEVEIT---EGVLIDDFSGAI 550 Query: 239 --LRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTII 296 LRRI+N V ++++DFG GY+ LS+LQ+ PF + + + +E N + I I+ Sbjct: 551 GILRRIKNCGVRVAMDDFGAGYSSLSYLQSFPFDKIKIDQAFTRKLEINPDSAAIVEAIL 610 Query: 297 DLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLP 338 L+ +L++ VIA+G+ET+ Q ++ G ++G + P P Sbjct: 611 SLAHRLNLPVIAEGVETESQLAFLASVGCGEVQGYLIGKPGP 652 >UniRef50_A0KK18 Cyclic diguanylate phosphodiesterase (EAL) domain protein n=1 Tax=Aeromonas hydrophila subsp. hydrophila ATCC 7966 RepID=A0KK18_AERHH Length = 557 Score = 82.4 bits (202), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 59/251 (23%), Positives = 116/251 (46%), Gaps = 12/251 (4%) Query: 108 KGESMAHYNIYYQPIYNAKNGNIAGCDVTIALKNS-----DGSAFALDSDRINYN-PNDN 161 KG + + Y QP+ ++++ + G +V + + + F ++R P Sbjct: 298 KGIANHEFIPYLQPVVDSRSQAVIGSEVLVRWCHPVYGLLSPAEFVTQAERSGAIIPMTE 357 Query: 162 KVSYLFGHINKLFSPIKNNLPHGFFITININPEDILTCDIERECLHFIKVFG-TERIRLV 220 ++ L + + S LP GF I N+ +L ++ C F+K F ++ RL Sbjct: 358 RLMAL---VAEKISVADVTLPPGFTINFNVTLSHLLNPSLKTACEAFLKAFERGDKPRLC 414 Query: 221 LQFSTKE-ELYIIRRY-QSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTM 278 L+ +E +L+ + R ++ + V +++D+G GY+ L H+ + + + + Sbjct: 415 LELVERESQLHHSEPVLMGAFRSLQASGVCFAVDDYGTGYSSLKHIHSSFIGAIKIDRLF 474 Query: 279 FHDIESNSLTDIIATTIIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLP 338 DIE +++ I I+DL+ ++ VIA+GIET Q + + GV +G P+P Sbjct: 475 VQDIERSTMAYQIVMNIMDLADRIGASVIAEGIETPAQVALLRKAGVDRFQGYLYGKPMP 534 Query: 339 ADAFVRKLLAS 349 D F+ L + Sbjct: 535 LDTFIAHCLPA 545 >UniRef50_Q0A846 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Alkalilimnicola ehrlichii MLHE-1 RepID=Q0A846_ALHEH Length = 1052 Score = 82.4 bits (202), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 46/164 (28%), Positives = 85/164 (51%) Query: 183 HGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSLRRI 242 H + + +N++P I D ++ G L L+ + + L RR SL+ + Sbjct: 883 HCYRMAVNVSPIQITGSDFVATVRTSLRRTGLPAECLELEITERMLLGGQRRVLQSLQAL 942 Query: 243 RNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSKQL 302 R+ V LSL+DFG GY+ LS+L+ +PFS + + ++ + + + +II +++ L Sbjct: 943 RDLGVGLSLDDFGTGYSALSYLRQMPFSVLKIDRSFVQGAAAGPRGEQLLCSIIGMAQGL 1002 Query: 303 HIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKL 346 + V+A+G+ET+ Q + G L+G + P+ A+A R L Sbjct: 1003 GLRVVAEGVETEAQVALLQREGCDLLQGYHFARPMAAEAVTRLL 1046 >UniRef50_UPI0001C377AD response regulator/GGDEF domain/EAL domain-containing protein n=1 Tax=Ruminococcus flavefaciens FD-1 RepID=UPI0001C377AD Length = 316 Score = 82.0 bits (201), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 59/234 (25%), Positives = 108/234 (46%), Gaps = 19/234 (8%) Query: 116 NIYYQPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHI----- 170 +++YQP + G I G + I DG+ + D + P S+L G I Sbjct: 77 HLFYQPKIDLATGKIMGVEALIRWIKPDGTIISPDV----FVPIAEN-SHLIGKISDFVL 131 Query: 171 ------NKLFSPIKNNLPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFS 224 NK++ K P+ ++IN D D++ + + G + L ++ + Sbjct: 132 NEGCRQNKMWQ--KMGYPN-IVMSINFASTDFYQTDLKDKVFEALAKSGLDAQWLEVELT 188 Query: 225 TKEELYIIRRYQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIES 284 L + S + ++R V L+++DFG GY+ LS+LQ +P + + L ++ DIE Sbjct: 189 ETLALSDVNFAISQMNKLRELGVKLAMDDFGTGYSSLSYLQTLPITLLKLDRSFITDIEH 248 Query: 285 NSLTDIIATTIIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLP 338 +++ I + +I ++K I+ IA+GIE + Q + G Y +G P+P Sbjct: 249 DNIAYEIVSAVIRIAKSKKIETIAEGIENQVQESILRMAGCDYAQGYLYGKPMP 302 >UniRef50_A5ETK5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=7 Tax=Bradyrhizobiaceae RepID=A5ETK5_BRASB Length = 892 Score = 82.0 bits (201), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 37/111 (33%), Positives = 64/111 (57%) Query: 237 SSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTII 296 +++ +RN V LSL+DFG GY+ LS L +P + + ++ D E++ T I T ++ Sbjct: 740 ATMSELRNMGVGLSLDDFGTGYSSLSRLAQLPIHELKIDRSFMRDFENDQGTRAIVTAVV 799 Query: 297 DLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLL 347 + + L + V+A+G+ET+ Q + E G ++G + P+ A AF R LL Sbjct: 800 RVGQSLDVKVVAEGVETEPQRRLLAELGCDAMQGFLFARPMAAGAFSRWLL 850 >UniRef50_A9BW89 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=7 Tax=cellular organisms RepID=A9BW89_DELAS Length = 947 Score = 82.0 bits (201), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 39/116 (33%), Positives = 67/116 (57%) Query: 238 SLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIID 297 +L+ + + V LS++DFG GY+ LS+L+ +P S + L ++ D+E++ ++ I+ Sbjct: 818 TLQAVHSQGVRLSMDDFGTGYSSLSYLRRLPVSELKLDRSFVADLENDEAAQALSNAILG 877 Query: 298 LSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLLASLKQV 353 + + LH+ V+A+G+ET Q + E+G +G S PLPA R L AS Q Sbjct: 878 IGRSLHLTVVAEGVETAAQNTILREQGYPVAQGYLFSRPLPAADLERWLQASSLQA 933 >UniRef50_A4BB62 Inner membrane protein PLUS sensory box protein LssE n=1 Tax=Reinekea blandensis MED297 RepID=A4BB62_9GAMM Length = 616 Score = 82.0 bits (201), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 75/328 (22%), Positives = 150/328 (45%), Gaps = 21/328 (6%) Query: 25 LSEIEIELLSQLLKGYSVNEISKRRNR-----SIKTVSCQK-MKLYKKLNVKSDLTLWR- 77 L E+++ L+Q L +++ EI N SI V K + Y+ ++D+ ++R Sbjct: 282 LEELQLAQLAQKLLQHAMREIQIDGNLLHCTCSIGIVCLPKDAETYEDAVKRADIAMYRS 341 Query: 78 --DVFLRFKAYLQPKNIICD---NFNSSVLPVVSSKGESMAHYNIYYQPIYNAKNGNIAG 132 D RF Y + +I + S ++ + + + I QPI + ++ NI G Sbjct: 342 KRDGKNRFHFYDRSMELIVNRRYQLQSQIMSAILDE-----QFYIVLQPIVHLESRNIVG 396 Query: 133 CDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLF---GHINKLFSPIKNNLPHGFFITI 189 +V + + + ++ I ++ + L+ H + + L F++T+ Sbjct: 397 AEVLARWAHPELGEIS-PAEFIPLAESNGLIDELWIFVMHHALEAARLLRQLEPEFYVTV 455 Query: 190 NINPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSLRRIRNNNVYL 249 NI P + + +C H I+ L L+ + E + + ++L ++ NN+ L Sbjct: 456 NIAPNQLKSPGFFDQCEHVIRESQLPFSALKLEITESEMIERDTEFDATLDQLHQNNIGL 515 Query: 250 SLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSKQLHIDVIAD 309 L+DFG GY+ L HLQ + F + + + + N T + I+ +S +L++ +IA+ Sbjct: 516 LLDDFGTGYSNLGHLQKMLFEAIKVDRLFINHCHLNEDTGALLRAIVAMSGELNVGLIAE 575 Query: 310 GIETKKQAGYMIERGVKYLKGIALSSPL 337 GIET+ + + E G+ +G L+ P+ Sbjct: 576 GIETEDELARVQELGILKGQGYLLARPM 603 >UniRef50_A9HX93 PAS:GGDEF n=1 Tax=Roseobacter litoralis Och 149 RepID=A9HX93_9RHOB Length = 459 Score = 82.0 bits (201), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 49/219 (22%), Positives = 99/219 (45%), Gaps = 1/219 (0%) Query: 119 YQPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINKLFSPIK 178 +QPIY N I G + I + + + ++ L I Sbjct: 212 FQPIYRMSNRQIVGAEALIRWHH-EKYGMICPEIIVEIAGKSGRMRELGDFILSEACSAA 270 Query: 179 NNLPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSS 238 + P F+++N +P D L D L ++ G + RL ++ + E++ + S+ Sbjct: 271 IHWPLDTFVSVNFSPSDFLRADFADFVLSELRAVGLDASRLRIEITESEKMLLTDDVFSN 330 Query: 239 LRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDL 298 L ++R N V + ++DFG G + ++++ +P +V + K++ D + I I + Sbjct: 331 LSKLRQNGVSVGIDDFGTGNSTMANIDKVPVDFVKIDKSLVSDCHQRKSSKIFINAISKV 390 Query: 299 SKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPL 337 S+ L ++VIA+G+ET ++ + GV + +G P+ Sbjct: 391 SRHLKLEVIAEGVETVQEYAILRGLGVIFAQGFYFHRPI 429 >UniRef50_Q98BI1 Mll5564 protein n=2 Tax=Mesorhizobium RepID=Q98BI1_RHILO Length = 514 Score = 82.0 bits (201), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 53/232 (22%), Positives = 110/232 (47%), Gaps = 17/232 (7%) Query: 115 YNIYYQPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDN-KVSYLFGHINKL 173 ++++YQP + G I G + I + + R P + +++ G IN + Sbjct: 271 FDLHYQPQLDLPTGRIIGYEALIRWNHPE---------RGMIPPMEFIQIAEETGMINPI 321 Query: 174 FSPI-------KNNLPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTK 226 + ++LP F+ +NI+P +T D ++ G + RL L+ + Sbjct: 322 GEWVLRKACSDAHHLPDDCFVAVNISPVQFMTKDFVGIVRDTMRATGIKPSRLELEVTET 381 Query: 227 EELYIIRRYQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNS 286 + R + L+ + + ++++DFG GY+ LS+L + F + + ++ I ++S Sbjct: 382 AMMQDRDRAAAILKELAEMGISVAVDDFGTGYSNLSYLIDFSFGKLKIDRSFVSRIGTDS 441 Query: 287 LTDIIATTIIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLP 338 + + +TI+ LS+ L + +IA+G+ET+ QA + G + ++G P P Sbjct: 442 SSGAVVSTIVGLSRALGVSIIAEGVETESQATLLRAAGCEVVQGYLFGRPAP 493 >UniRef50_A4XWY6 Diguanylate phosphodiesterase n=1 Tax=Pseudomonas mendocina ymp RepID=A4XWY6_PSEMY Length = 453 Score = 82.0 bits (201), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 58/240 (24%), Positives = 116/240 (48%), Gaps = 10/240 (4%) Query: 114 HYNIYYQPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHI-NK 172 + +YYQP NA N + G ++ I ++ + I+Y N + L + + Sbjct: 213 QFVLYYQPQLNAAN-RVIGAELLIRWQHPQ-RGLVGPGEFIDYAENTGLIIPLGQWVLEQ 270 Query: 173 LFSPIKNNLPHGFF----ITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEE 228 + +++ F + +NI+ + E L I+ G RL L+ + Sbjct: 271 TAAQLRHWSDEPLFRDIGLAVNISQKQFRQPGFVAEILALIERHGIAAQRLELELTETLI 330 Query: 229 LYIIRRYQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLT 288 ++ + + + + V SL+DFG G++ LSHL+ +P S + + ++ D+ +++ + Sbjct: 331 VHDMEDLTRKMNALVEHGVRFSLDDFGTGFSSLSHLKRLPLSKLKIDRSFICDVLTDANS 390 Query: 289 DIIATTIIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLP-AD--AFVRK 345 + I T+I L + + + VIA+G+ET+ Q ++ + G +G L P+P AD AFV++ Sbjct: 391 ETIVRTVIALGQSMGMTVIAEGVETEAQRRFLADNGCSQFQGYLLGRPMPLADFCAFVQR 450 >UniRef50_Q2BPW4 Sensory box/GGDEF/EAL/CBS domain protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BPW4_9GAMM Length = 837 Score = 81.6 bits (200), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 37/166 (22%), Positives = 95/166 (57%) Query: 187 ITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSLRRIRNNN 246 + IN++ + + D+ E L ++ + L ++ + L+ + +++++++R+ Sbjct: 671 VAINVSAKQMQRRDMAEEVLQVVEQYSCPPHLLAVELTETSFLHCLDETRATIKKLRDAG 730 Query: 247 VYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSKQLHIDV 306 + ++++DFG G++ LS+++NI + + ++ +IE++ + I ++II++S+ + + V Sbjct: 731 ISIAIDDFGTGFSSLSYIRNIDMDVLKIDRSFLINIENSDVDRTIVSSIIEMSQAMGLQV 790 Query: 307 IADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLLASLKQ 352 +A+GIET+ Q + ++G ++ P+PA+ F A LK+ Sbjct: 791 VAEGIETETQFAMLKALNCDQIQGYLIARPMPAENFSDWFKAQLKE 836 >UniRef50_Q21KC5 Diguanylate cyclase/phosphodiesterase n=1 Tax=Saccharophagus degradans 2-40 RepID=Q21KC5_SACD2 Length = 823 Score = 81.6 bits (200), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 35/110 (31%), Positives = 70/110 (63%) Query: 238 SLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIID 297 ++ R+RN +S++DFG GY+ LS+L+ +P + + ++ DI ++ I + II Sbjct: 709 TMERLRNIGSRISIDDFGTGYSSLSYLKRLPIDSLKIDRSFIMDIPGDTNDVAITSAIIA 768 Query: 298 LSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLL 347 ++++L++ VIA+GIETK+Q +++E+G +++G + P P F++ L Sbjct: 769 MAEKLNLSVIAEGIETKEQCEFLVEQGCFHMQGYYFAKPAPVRTFLKPQL 818 >UniRef50_B9JYX6 GGDEF family protein n=1 Tax=Agrobacterium vitis S4 RepID=B9JYX6_AGRVS Length = 511 Score = 81.6 bits (200), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 49/224 (21%), Positives = 103/224 (45%), Gaps = 4/224 (1%) Query: 118 YYQPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINKLFSPI 177 +YQPI + + I G +V +A L + N + LF + + Sbjct: 268 WYQPIVDGASKRILGVEV-LARWQHPYRGLVLPGVFLPLAEERNLLDRLFAQVARAACAQ 326 Query: 178 KNNLPHGF---FITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRR 234 L ++++NI+P + ++ ++ G LV++ + + + R Sbjct: 327 TAPLVKAGKLNYVSVNISPSQFKSGNLAMVIASILEQTGFPATALVVEITEDLIMSDLLR 386 Query: 235 YQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATT 294 L + V ++L+DFG GY+ +S L ++P ++ L +++ + + + +I Sbjct: 387 AGRELSELSRLGVRVALDDFGTGYSNISSLSSLPIQWLKLDRSLISRVGDDRVGQVIVQA 446 Query: 295 IIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLP 338 ++ +++ L IDV+A+GIET+ QA +++E G + +G P P Sbjct: 447 VLQMAQALGIDVVAEGIETEVQARWLVEAGCRKHQGFLYGRPAP 490 >UniRef50_B6BJN9 Sensory box sensor/ggdef/eal domain protein n=2 Tax=Campylobacterales bacterium GD 1 RepID=B6BJN9_9PROT Length = 642 Score = 81.6 bits (200), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 61/249 (24%), Positives = 120/249 (48%), Gaps = 30/249 (12%) Query: 115 YNIYYQPIYNAKNGNIAGC----------------DVTIALKNSDGSAFALDSDRINYNP 158 + +YYQP +AK+ I G DV I + S G +L I Sbjct: 402 FKLYYQPKVDAKSKKIVGAEALLRWIHHEKGLIGPDVFIPISESTGFMLSLGKFVIQ--- 458 Query: 159 NDNKVSYLFGHINKLFSPIKNNLPHGFFITININPEDILTCDIERECLHFIKVFGTERIR 218 ++ ++ + FS + N G ++INI+ D+ ++ + + + Sbjct: 459 -ESSLAI------RRFSDLGYN---GLKVSINISTRQFQNTDLYQDLKEELSKNDVDPKQ 508 Query: 219 LVLQFSTKEELYIIRRYQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTM 278 L ++ + + I++ ++L+ I+N V + ++DFG GY+ LS+L+ P + + K+ Sbjct: 509 LGIEITESIMMQHIKKTLTTLQEIKNLGVSIYIDDFGTGYSSLSYLKKFPIDTLKIDKSF 568 Query: 279 FHDI-ESNSLTDIIATTIIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPL 337 DI E + +I+ TI+ + K L +DV+A+G+E + Q Y+ E G + ++G + P+ Sbjct: 569 VDDISEVGNNDEILLNTILAMGKSLGLDVVAEGVEHEYQYSYLKEHGCEIIQGYYFAKPM 628 Query: 338 PADAFVRKL 346 P + F++ L Sbjct: 629 PEEEFIKLL 637 >UniRef50_P74400 Sll0267 protein n=3 Tax=Bacteria RepID=P74400_SYNY3 Length = 1578 Score = 81.6 bits (200), Expect = 4e-14, Method: Composition-based stats. Identities = 40/165 (24%), Positives = 88/165 (53%), Gaps = 4/165 (2%) Query: 187 ITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQS--SLRRIRN 244 I IN++P + +E + + G + RL L+ + E L + +Q+ ++ ++ Sbjct: 1416 IAINVSPRQFRQANFAKEIKNLLACTGVDPYRLTLEVT--EGLIVEDTHQAIATMFELQT 1473 Query: 245 NNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSKQLHI 304 ++ S++DFG GY+ LS+L+ +P + + + + D + + II +++ ++ Sbjct: 1474 LGIHFSVDDFGTGYSSLSYLKRLPLNELKIDRAFVQDAPQDLNNAALVEAIISVARTFNL 1533 Query: 305 DVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLLAS 349 ++A+G+ET++Q ++ + G + +G P+P D F +KL AS Sbjct: 1534 AIVAEGVETEEQVQFLAQLGCNFYQGYFYGRPMPIDEFHQKLTAS 1578 >UniRef50_A3JB19 Putative uncharacterized protein n=1 Tax=Marinobacter sp. ELB17 RepID=A3JB19_9ALTE Length = 712 Score = 81.6 bits (200), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 45/169 (26%), Positives = 87/169 (51%), Gaps = 2/169 (1%) Query: 170 INKLFSPIKNNLPHGFF--ITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKE 227 + + S +K GF I +N++ + D+ + +K F +L L+ + Sbjct: 535 LEQAISQLKAWTDEGFTGRIAVNVSALQLSDRDLSQRIDDMLKRFDVSAGQLELEITETA 594 Query: 228 ELYIIRRYQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSL 287 + I R ++L+R R+ + L+++DFG GY+ L++L+ +P S V + + + N Sbjct: 595 LMDDIERSMATLKRFRDLGLTLAVDDFGTGYSSLAYLKALPVSRVKIDQAFVTGLPDNDQ 654 Query: 288 TDIIATTIIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSP 336 + + TII L+ + +VIA+G+ET+ QAG++ G ++G L P Sbjct: 655 DEALCRTIITLAHNMGFEVIAEGVETEAQAGWLAISGCDEMQGFLLGRP 703 >UniRef50_A1W7N9 Diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(S) n=4 Tax=Comamonadaceae RepID=A1W7N9_ACISJ Length = 1047 Score = 81.3 bits (199), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 43/156 (27%), Positives = 79/156 (50%) Query: 187 ITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSLRRIRNNN 246 + +N++P + L + G + RL L+ + L + + + ++R Sbjct: 882 VAVNVSPRQFHEGSFVPQVLEALAASGADARRLRLELTEGMLLQDVEDTIAKMVQLRGYG 941 Query: 247 VYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSKQLHIDV 306 V SL+DFG GY+ L++L+ +P + + K+ D+ ++ +IA TI+ L L + V Sbjct: 942 VGFSLDDFGTGYSSLAYLKRLPLHELKIDKSFVRDVLTDPNDAVIARTIVALGTSLGLRV 1001 Query: 307 IADGIETKKQAGYMIERGVKYLKGIALSSPLPADAF 342 +A+G+ET+ Q ++ G +G LS PL A AF Sbjct: 1002 VAEGVETEAQRAFLERNGCHAWQGYLLSPPLQAAAF 1037 >UniRef50_A6FHU8 GGDEF family protein n=1 Tax=Moritella sp. PE36 RepID=A6FHU8_9GAMM Length = 628 Score = 81.3 bits (199), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 56/239 (23%), Positives = 112/239 (46%), Gaps = 5/239 (2%) Query: 116 NIYYQPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKV----SYLFGHIN 171 +++YQPI K + G + I N A A D IN + ++ +++ Sbjct: 389 SVHYQPIICVKTQRVLGAEALIRWNNPILGAVAPDR-FINLAEQNGQILALGNFVLRTAM 447 Query: 172 KLFSPIKNNLPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYI 231 + + + + F I +NI+P + ++ + + L L+ + L Sbjct: 448 EQARHWRKSFGNDFSIAVNISPVQLRDDNLVSRIAQLLAYYQLPGSALELEITEGVLLQD 507 Query: 232 IRRYQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDII 291 ++ SL ++ V +SL+DFG GY+ LS+LQ F + + ++ ++ + Sbjct: 508 EKKVAKSLDGLQKLGVSISLDDFGTGYSSLSYLQKYSFDTLKIDRSFIMNLMECDQDKEL 567 Query: 292 ATTIIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLLASL 350 A II ++K+L++ V+A+G+ET +Q +++E G + +G P+PA F + L+ L Sbjct: 568 ARAIIAMAKKLNLQVVAEGVETPEQHQFIVEEGCDFGQGYLYGKPVPATMFTAQYLSRL 626 >UniRef50_Q07T95 Diguanylate cyclase/phosphodiesterase n=1 Tax=Rhodopseudomonas palustris BisA53 RepID=Q07T95_RHOP5 Length = 812 Score = 81.3 bits (199), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 40/115 (34%), Positives = 65/115 (56%) Query: 239 LRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDL 298 + R+R V SL+DFG GY+ L +L+ +P + + ++ DI ++ IA II L Sbjct: 686 MNRLREKGVRFSLDDFGTGYSSLLYLRKLPIEQLKIDRSFVRDILVDANDAAIAKMIIAL 745 Query: 299 SKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLLASLKQV 353 K L +DV+A+G+ET+ Q +IE G +G +S P+P F R+ + + QV Sbjct: 746 GKTLGLDVLAEGVETEGQLRELIEMGCDAYQGYLISRPVPVSEFERQAMGAAAQV 800 >UniRef50_B3E5T4 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=1 Tax=Geobacter lovleyi SZ RepID=B3E5T4_GEOLS Length = 581 Score = 81.3 bits (199), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 38/124 (30%), Positives = 73/124 (58%) Query: 219 LVLQFSTKEELYIIRRYQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTM 278 L L+ + + I + ++L R+R + LS++DFG GY+ L++LQ +P + + + ++ Sbjct: 446 LCLELTESIVMQDIEQTVATLHRLREQGIKLSIDDFGTGYSSLNYLQRMPLTELKIDRSF 505 Query: 279 FHDIESNSLTDIIATTIIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLP 338 ++ ++ I +++ LSK L++ V+A+G+ET +QA ++ R L+G S PL Sbjct: 506 VMNLPQDTSAIAIVDSVLTLSKSLNLTVVAEGVETPQQAAFLTARQCHQLQGYLFSRPLG 565 Query: 339 ADAF 342 A AF Sbjct: 566 AAAF 569 >UniRef50_C8QG51 EAL domain protein n=3 Tax=Enterobacteriaceae RepID=C8QG51_9ENTR Length = 534 Score = 81.3 bits (199), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 49/229 (21%), Positives = 115/229 (50%), Gaps = 3/229 (1%) Query: 114 HYNIYYQPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINKL 173 ++++YQP+Y+ + G + + +G D I+ + + L H+ +L Sbjct: 280 QFSVHYQPVYSVAEQHCNGVEALLRWHLPNGDTIRPDI-FISAAEEEGMIVPLTRHLLEL 338 Query: 174 FSP-IKN-NLPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYI 231 + I++ + GF I +N+ E + D ++ F + +++++ L+ + + ++ Sbjct: 339 MAEDIQSWQVAPGFHIGLNLAAEHLQHPDFVKDIELFARRVQDKKLQITLELTERSLIHD 398 Query: 232 IRRYQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDII 291 LR +++ + ++++DFG G+ LS+L P Y+ + + + IE + Sbjct: 399 GEDVARKLRLLQSQGMRVAIDDFGTGHCSLSYLLTFPLDYLKIDRGFINAIERLDGETPV 458 Query: 292 ATTIIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPAD 340 II+L+++L ++V+ +G+ET Q Y+ +RGV +++G + P+ D Sbjct: 459 LDAIINLARKLQLEVLGEGVETSLQFQYLQQRGVLFIQGYYYAWPMDND 507 >UniRef50_UPI0001BC3870 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) n=1 Tax=Butyrivibrio crossotus DSM 2876 RepID=UPI0001BC3870 Length = 683 Score = 81.3 bits (199), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 56/238 (23%), Positives = 118/238 (49%), Gaps = 9/238 (3%) Query: 114 HYNIYYQPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVS----YLFGH 169 + +Y QPIY A + +AG +V + ++ F I Y + ++ +++ Sbjct: 175 QFKVYIQPIYYADSNVMAGGEVLVRWEHP-TLGFLSPGRFIRYFEQNYLITRLDKFVWEE 233 Query: 170 INKLFSPIKNNLPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEEL 229 ++ +K ++INI+ D L ++ + + + +L ++ + E Sbjct: 234 ACRILKRMKEEGKTVIPLSINISRADFLFDNLYDVLVGLVTKYDVAPDKLRIEIT--ESA 291 Query: 230 YIIR--RYQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSL 287 YI + + ++ R+ + ++DFG GY+ L+ L+ +PF + + KT+ +I+ + Sbjct: 292 YIDNPVKIKDTIDRLCEYGFSIHIDDFGTGYSSLNTLKELPFGILKIDKTLIDEIDGSEK 351 Query: 288 TDIIATTIIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRK 345 + +TII+++K L +DVIA+G+E KQ ++ G KY++G S P+ + F +K Sbjct: 352 AANVVSTIINMAKLLGMDVIAEGVENVKQLNFLKHMGCKYIQGFYFSKPVCEEEFFKK 409 >UniRef50_C5T9Y9 Diguanylate cyclase/phosphodiesterase with extracellular sensor n=3 Tax=Comamonadaceae RepID=C5T9Y9_ACIDE Length = 777 Score = 80.9 bits (198), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 45/176 (25%), Positives = 92/176 (52%), Gaps = 3/176 (1%) Query: 165 YLFGHINK-LFSPIKNNLPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQF 223 ++F + + L +P +LP +++N++ D+L ++ + +G L L+ Sbjct: 593 WMFEEVCRWLATPAARHLP--LRVSVNLSTRDLLDPELCHRLAALLARYGVAASALCLEI 650 Query: 224 STKEELYIIRRYQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIE 283 + + +R ++ L R+ + LS++DFG GY+ L++L+ +P + + K+ +E Sbjct: 651 TESAIMDDPQRAEAMLNRLSEHGFKLSIDDFGTGYSSLAYLKRLPVDELKIDKSFVMGME 710 Query: 284 SNSLTDIIATTIIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPA 339 S +I + IDL+ L + V+A+G+ET+ G++ +G A+S PLPA Sbjct: 711 SAGDDALIVRSTIDLAHNLGLTVVAEGVETQAILGHLRSLSCDEAQGYAISKPLPA 766 >UniRef50_Q2BRD7 Two-component response regulator n=1 Tax=Neptuniibacter caesariensis RepID=Q2BRD7_9GAMM Length = 709 Score = 80.9 bits (198), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 45/156 (28%), Positives = 82/156 (52%) Query: 187 ITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSLRRIRNNN 246 I IN++ L D E+ + K + L+ + + + R Q L+R+R+ Sbjct: 541 IAINLSGISFLRNDFEQRLTNTFKAHNVPLHHIELELTEGVLIEDLARIQEKLQRVRDMG 600 Query: 247 VYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSKQLHIDV 306 + +S++DFG GY+ LS ++N+P ++ + K+ DI+ N I II +++ L + V Sbjct: 601 ISVSIDDFGTGYSSLSRIKNLPVDHIKIDKSFIDDIDKNPQDLKIVQAIILMAQGLQLKV 660 Query: 307 IADGIETKKQAGYMIERGVKYLKGIALSSPLPADAF 342 +A+G+ET+KQ + E ++G LS PL + F Sbjct: 661 VAEGVETEKQLSILREEHCDVVQGYLLSRPLSVEDF 696 >UniRef50_A3DCG7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Clostridium thermocellum RepID=A3DCG7_CLOTH Length = 862 Score = 80.9 bits (198), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 39/113 (34%), Positives = 69/113 (61%), Gaps = 1/113 (0%) Query: 239 LRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDL 298 L ++R + +SL+DFG GY+ L++L+ +P + + K+ DI +NS + IA T+I L Sbjct: 741 LNQLRKKGIRVSLDDFGTGYSSLNYLRQLPIDTLKIDKSFVQDIRANSKEEAIAKTVISL 800 Query: 299 SKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLLASLK 351 + +L + V+A+G+ETK+Q ++ + +G S PLPA+ + K+L K Sbjct: 801 AHKLDLTVVAEGVETKEQLLFLKKEKCDKAQGYLFSKPLPAEE-IEKMLRDKK 852 >UniRef50_A1WHK4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Comamonadaceae RepID=A1WHK4_VEREI Length = 836 Score = 80.9 bits (198), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 37/174 (21%), Positives = 91/174 (52%) Query: 172 KLFSPIKNNLPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYI 231 +L + ++ L F +++N++ D ++ L ++ G RL ++ + L Sbjct: 651 QLVAWSRSALTRAFSLSVNVSVRQFRQADFVQQLLATLEASGANPERLTIELTESLLLND 710 Query: 232 IRRYQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDII 291 ++ + ++++R + + +L+DFG GY+ LS L+ +P + + ++ D+ +++ I Sbjct: 711 VQDIIARMQQLRCHGLGFALDDFGTGYSSLSQLKRLPLDQIKIDRSFVRDLPADAGDGAI 770 Query: 292 ATTIIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRK 345 +I+ L++ L + V+A+G+ET+ Q ++ G + +G P+P +A + Sbjct: 771 VRSILALAQSLGLAVVAEGVETRAQLEFLQHHGCQTFQGYHFGRPMPPEALAHR 824 >UniRef50_C6X932 Diguanylate phosphodiesterase n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6X932_METSD Length = 473 Score = 80.9 bits (198), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 53/238 (22%), Positives = 105/238 (44%), Gaps = 40/238 (16%) Query: 145 SAFALDSDRINYNPNDNKVSYLFGH--INKLFSPIKNNLPHGFFI--------------- 187 +A A R++Y P + V +FG + + P++ +P G FI Sbjct: 213 AALAQGQFRLHYQPQVDAVGNIFGAEALLRWQHPVRGMIPPGVFIAAAEETGLIQPIGTW 272 Query: 188 -----------------------TININPEDILTCDIERECLHFIKVFGTERIRLVLQFS 224 ++N++ + D +E + + G +L L+ + Sbjct: 273 VLKEACAQLVKWSKDPNMAHLSISVNVSASQLRQPDFVQEVIEIVMRSGATPAQLKLELT 332 Query: 225 TKEELYIIRRYQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIES 284 + ++ +R + SL+DFG GY+ L++L+++PF + + ++ D+ + Sbjct: 333 ESMLAKDVDTTIQKMKALRAFGISWSLDDFGTGYSSLNYLKHLPFEQLKIDQSFVRDLLT 392 Query: 285 NSLTDIIATTIIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAF 342 N I T++ LSK L++ +IA+G+ET +Q Y++ +G +G S PL +AF Sbjct: 393 NESDKAIVETLVVLSKNLNMMLIAEGVETTEQLNYLLNKGCMKYQGYLFSRPLSIEAF 450 >UniRef50_Q1JW15 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JW15_DESAC Length = 893 Score = 80.9 bits (198), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 39/115 (33%), Positives = 69/115 (60%) Query: 239 LRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDL 298 L ++R +LS++DFG GY+ LS+L++ P + + ++ D+ + II II L Sbjct: 777 LNKLRYLGNHLSIDDFGTGYSSLSYLKHFPIDRLKIDRSFVKDLNVDPDDAIIVEAIIAL 836 Query: 299 SKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLLASLKQV 353 + L ++V+A+G+ET Q +M +RG ++G ++ P+PAD F+R L S +Q Sbjct: 837 AHGLRLNVVAEGVETSDQFEFMRQRGCDEIQGYVVARPMPADDFLRYLQKSKRQT 891 >UniRef50_Q1IP01 Periplasmic sensor diguanylate phophodiesterase n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1IP01_ACIBL Length = 506 Score = 80.9 bits (198), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 58/249 (23%), Positives = 112/249 (44%), Gaps = 36/249 (14%) Query: 118 YYQPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINKLFSPI 177 +YQPI ++++G+I G + + + G N P + F N L PI Sbjct: 271 FYQPIIDSRDGSILGAEALVRWQPKGG----------NLIPPGQFIP--FAEENHLIDPI 318 Query: 178 KNNLPH---------GF-----FITININPEDILTCDIERECLHFIKVFGTERI---RLV 220 + L G+ F++IN E I C + ++ +RI Sbjct: 319 TDQLEEKVLDDIKQFGWQDSSRFVSINAVAEQITDTPF---CANLLRRLAEKRIPAKNFS 375 Query: 221 LQFSTKEELYIIRRYQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFH 280 ++ + + + + R +++L+ + + + L+D G G+ S++Q +P + + + K MF Sbjct: 376 VEITERHQFPDLDRGRAALQSLVEAGIEIKLDDAGTGFGGFSYIQELPITTLKIDK-MFI 434 Query: 281 DI---ESNSLTDIIATTIIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPL 337 D E + II+ +K ++ IA+G+ETK+Q + GV ++G S P+ Sbjct: 435 DTLRQEKQDPKRAVLQAIIEFAKTANLHAIAEGVETKEQVSQLSAAGVFAIQGYVYSKPM 494 Query: 338 PADAFVRKL 346 PA+ F+R + Sbjct: 495 PAEEFIRWM 503 >UniRef50_C5V3L4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V3L4_9PROT Length = 900 Score = 80.9 bits (198), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 45/169 (26%), Positives = 85/169 (50%) Query: 184 GFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSLRRIR 243 GF +++N++ + D + I+ + L L+ + L I +++ ++ Sbjct: 725 GFVLSVNVSAKQFRQTDFVNQVQSLIQQYEINPSLLKLELTESMLLDNIEDTIATMSALK 784 Query: 244 NNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSKQLH 303 V SL+DFG GY+ L +L+ +P + + ++ DI ++ I TII ++ L Sbjct: 785 ELGVKFSLDDFGTGYSSLQYLKRLPLDQLKIDQSFVRDIAVDASDRAIVRTIIAMAHSLD 844 Query: 304 IDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLLASLKQ 352 +DVIA+G+ET++Q ++ +G K +G P+P + F L SL Q Sbjct: 845 LDVIAEGVETEEQQKHLSSKGCKNFQGYLFGKPVPIEQFETSLRKSLFQ 893 >UniRef50_B7S1Z2 Cyclic diguanylate phosphodiesterase domain protein n=1 Tax=marine gamma proteobacterium HTCC2148 RepID=B7S1Z2_9GAMM Length = 570 Score = 80.9 bits (198), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 46/157 (29%), Positives = 84/157 (53%), Gaps = 2/157 (1%) Query: 185 FFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSLRRIRN 244 F + +NI+P D+ R F++ G + RL L+ + + + L++++ Sbjct: 399 FRVCVNISPLQFNQSDLPRSIGEFLRESGMQASRLELELTESAIMTDAQTNIEKLQQLKA 458 Query: 245 NNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSKQLHI 304 + L+++DFG GY+ LS+L+ P + + ++ D+ + I+ II LSK L++ Sbjct: 459 LGLELAVDDFGTGYSSLSYLKRFPIDTLKIDQSFVADLGTTDGAAIV-DAIIALSKTLNL 517 Query: 305 DVIADGIETKKQAGYMIERGVKYLKGIALSSPL-PAD 340 VIA+GIE K+Q Y++ RG L+G + P+ P D Sbjct: 518 RVIAEGIEEKEQLDYLVARGADLLQGYFFARPIYPED 554 >UniRef50_B1Y236 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Leptothrix cholodnii SP-6 RepID=B1Y236_LEPCP Length = 729 Score = 80.9 bits (198), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 40/162 (24%), Positives = 90/162 (55%) Query: 187 ITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSLRRIRNNN 246 + +N++P+ +L ++R+ L + G L L+ + + + + L+R+R + Sbjct: 558 VAVNLSPKQLLQRGLDRQLLLACERAGVAPAMLELELTESALVDNMTIIEPLLQRLRQHG 617 Query: 247 VYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSKQLHIDV 306 L+L+DFG G++ LS+L+++PF+ + + ++ DI+ + + ++ L L + Sbjct: 618 FSLALDDFGTGFSSLSYLRHLPFNKIKIDRSFVMDIDHDHRAARLLAHMVKLCGALGMST 677 Query: 307 IADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLLA 348 +A+G+E++ Q +++ GV+ +G + PLP D +V +L A Sbjct: 678 VAEGVESESQFKALLDLGVQEFQGYYFARPLPVDEWVARLSA 719 >UniRef50_B9R6G6 Putative uncharacterized protein n=1 Tax=Labrenzia alexandrii DFL-11 RepID=B9R6G6_9RHOB Length = 1020 Score = 80.5 bits (197), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 46/156 (29%), Positives = 83/156 (53%), Gaps = 3/156 (1%) Query: 187 ITININPEDILTCDIERECL--HFIKVFGTERIRLVLQFSTKEELYIIRRYQSSLRRIRN 244 +++N++ + + D E E L H K E +L ++ + L I R +R R Sbjct: 840 VSVNVSALQLTSSDFE-ETLNKHLQKHPAAEPCQLEIEILETDALSDIERVSKIIRNCRL 898 Query: 245 NNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSKQLHI 304 ++V +L+DFG GY+ L++L+ +P + + + HD +N+ + II L + +I Sbjct: 899 SSVRFALDDFGTGYSSLAYLKQLPIDTLKIDQGFVHDSLNNAQDQELLKLIISLGRVYNI 958 Query: 305 DVIADGIETKKQAGYMIERGVKYLKGIALSSPLPAD 340 DV+A+G+ET A + G +Y +G A + P+PAD Sbjct: 959 DVLAEGVETPAHAELLHTYGCRYAQGYAFARPMPAD 994 >UniRef50_C0QQR2 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor n=1 Tax=Persephonella marina EX-H1 RepID=C0QQR2_PERMH Length = 687 Score = 80.5 bits (197), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 58/239 (24%), Positives = 109/239 (45%), Gaps = 21/239 (8%) Query: 114 HYNIYYQPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVS----YLFGH 169 + + YQPIY+ I + + KN++G SD I + ++ Sbjct: 448 EFYLVYQPIYDINTEKIVSVEALLRWKNAEGEHIP-PSDFIPILEETGLIKEVGRWVIEE 506 Query: 170 INKLFSPIKNNLPHGFFITININPEDILTCD--------IERECLHFIKVFGTERIRLVL 221 + K + I++NI+ + IL + I +EC K F + L Sbjct: 507 VCKQLKRWNSLGIKDITISVNIDIQQILEENFVKTVESIISKEC----KTFSS----LKF 558 Query: 222 QFSTKEELYIIRRYQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHD 281 + + E + +L+ + + + +S++DFG GY+ LS+L+ +P +Y+ + ++ D Sbjct: 559 EITESEAMKFPETVIQTLKNLNSIGIEISIDDFGTGYSSLSYLKTMPVAYIKIDRSFIKD 618 Query: 282 IESNSLTDIIATTIIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPAD 340 + + I+ I++LSK VIA+G+ET++Q Y+ E ++G PLPAD Sbjct: 619 LPEDKDDRILTKAIVELSKNFGYKVIAEGVETEEQLIYLKEIKCDMVQGFYFCRPLPAD 677 >UniRef50_Q1JXC9 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JXC9_DESAC Length = 888 Score = 80.5 bits (197), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 35/102 (34%), Positives = 65/102 (63%) Query: 246 NVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSKQLHID 305 + LS++DFG GY+ L++L+ P Y+ + ++ D+ + IAT +IDL++ ++++ Sbjct: 782 GIQLSIDDFGTGYSSLAYLKKFPIQYLKIDRSFVRDVIIDPNDAAIATAVIDLARNMNLN 841 Query: 306 VIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLL 347 VIA+GIE + Q ++++RG Y +G S P+PA F + L+ Sbjct: 842 VIAEGIEQQDQHQFLLDRGCGYGQGYLFSRPIPAHEFEQLLV 883 >UniRef50_D0KJQ5 EAL domain protein n=4 Tax=Pectobacterium RepID=D0KJQ5_PECWW Length = 540 Score = 80.5 bits (197), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 57/241 (23%), Positives = 114/241 (47%), Gaps = 13/241 (5%) Query: 115 YNIYYQPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVS-------YLF 167 + ++YQPI + GC+ I +SDG DS + P +V Y+ Sbjct: 297 FKLHYQPIIELNTAQVVGCEALIRWCHSDGRVIMPDS----FIPMIRQVGLMKAMTLYVI 352 Query: 168 GHINKLFSPIKNNLPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKE 227 + +K + P F++IN+ + I + +I V G E + ++ T+ Sbjct: 353 DEALQTACVLKKSYPE-MFVSINLEAAEFEDISIFNYLVEYIAVHGLEGTNINVEL-TES 410 Query: 228 ELYIIRRYQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSL 287 + ++ + + ++ ++++DFG GYA LS+L+ + + + + K+ +I ++S Sbjct: 411 SMIEPQKAGLMVELYQQKSIDVAIDDFGTGYAGLSYLERVKANKLKIDKSFVWNINNHSP 470 Query: 288 TDIIATTIIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLL 347 DI+ + I+ ++ L+ ++A+G+ET Q Y+ GV Y +G S L +A + L Sbjct: 471 GDIVLSHIVSMAHCLNQQIVAEGVETLIQETYLKSLGVAYAQGWLYSKALTQEALIVFLA 530 Query: 348 A 348 A Sbjct: 531 A 531 >UniRef50_A1ASK8 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Proteobacteria RepID=A1ASK8_PELPD Length = 858 Score = 80.5 bits (197), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 69/273 (25%), Positives = 121/273 (44%), Gaps = 52/273 (19%) Query: 100 SVLPVVSSKGESMAHYNIYYQPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPN 159 S L + +GE + +YYQP + +G I+GC+ I + A +D I Sbjct: 451 SALRLALERGE----FTLYYQPKVDLASGRISGCEALIRWLHPRRGVVA-PADFIPLAEE 505 Query: 160 DNKVSYLFGHINKLFS-----------PIKNNLPHGFFITININPEDILTCDIE---REC 205 + + + K PI N + +N++ T D+ RE Sbjct: 506 TGLIVPIGTWVLKEACRQVRAWQAEGVPIAN-------VAVNLSARQFRTGDLPGLVREV 558 Query: 206 L-------HFIKVFGTERIRLVLQ---FSTKEELYIIRRYQSSLRRIRNNNVYLSLNDFG 255 L H +++ TE + + + EEL I V LSL+DFG Sbjct: 559 LGETGLDPHLLELEMTESMVMADHAQVVAVMEELTAI-------------GVRLSLDDFG 605 Query: 256 MGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSKQLHIDVIADGIETKK 315 GY+ +HL + P +++ + ++ I ++ + IAT+II ++ ++ + IA+G+ET+ Sbjct: 606 TGYSSFAHLSHFPINHLKIDRSFIKQIVTDPNSATIATSIIAMAHRMRLKAIAEGVETEA 665 Query: 316 QAGYMIERGVKYLKGIALSSPLPAD---AFVRK 345 Q Y+ ++G ++G LS PLPA A VR+ Sbjct: 666 QLAYLRKQGCDEIQGYLLSRPLPASEYAALVRR 698 >UniRef50_Q7CVL6 GGDEF family protein n=1 Tax=Agrobacterium tumefaciens str. C58 RepID=Q7CVL6_AGRT5 Length = 724 Score = 80.1 bits (196), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 43/117 (36%), Positives = 67/117 (57%), Gaps = 3/117 (2%) Query: 228 ELYIIRRYQSSLR---RIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIES 284 E II+ ++S+R I+ V L+L+DFG+GY+ L L+ P S + + ++ + Sbjct: 588 ETLIIQDVETSVRIMHAIKQMGVSLALDDFGIGYSCLGMLKTFPLSCMKIDRSFLTHLPE 647 Query: 285 NSLTDIIATTIIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADA 341 + I T +I L+ L IDVIA+G+ET +QA ++ G Y +G S PLPADA Sbjct: 648 KTKDSAIVTIMIQLAGSLGIDVIAEGVETAEQANFLRTAGCPYGQGYYFSRPLPADA 704 >UniRef50_D1AZY7 Diguanylate cyclase n=1 Tax=Sulfurospirillum deleyianum DSM 6946 RepID=D1AZY7_SULD5 Length = 586 Score = 80.1 bits (196), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 47/186 (25%), Positives = 91/186 (48%), Gaps = 1/186 (0%) Query: 164 SYLFGHINKLFSPIKNNLPHG-FFITININPEDILTCDIERECLHFIKVFGTERIRLVLQ 222 S++ + S K + PH ++IN++ + + I + G++ + L+ Sbjct: 401 SWVLHRACQQLSEWKKDFPHQPLHLSINVSAKQFQEASFYETVANAIALSGSDAGSIKLE 460 Query: 223 FSTKEELYIIRRYQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDI 282 + L I + + +R V SL+DFG GY+ LS+L+ +P + + ++ DI Sbjct: 461 LTESLILDSIHETIAKIEALRLLGVGFSLDDFGTGYSSLSYLKRLPLDELKIDQSFVRDI 520 Query: 283 ESNSLTDIIATTIIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAF 342 ++ +I TII+++ +DVIA+G+E K+Q +++E G +G P+P + Sbjct: 521 GHDNNDAMIVKTIIEMAHNFDLDVIAEGVEDKEQFNFLMENGCGLFQGYLFGKPMPPEEL 580 Query: 343 VRKLLA 348 R LA Sbjct: 581 ERLFLA 586 >UniRef50_A4BT02 Sensory box/GGDEF family protein n=1 Tax=Nitrococcus mobilis Nb-231 RepID=A4BT02_9GAMM Length = 819 Score = 80.1 bits (196), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 36/107 (33%), Positives = 64/107 (59%) Query: 238 SLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIID 297 LRR+R V ++++DFG GYA LS+L P + + ++ I + + +I+ Sbjct: 679 GLRRLRELGVRIAVDDFGTGYASLSYLHWFPLDKLKVDQSFVAAIGQDPTKTALLKSILL 738 Query: 298 LSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVR 344 L+ QL + V+A+G+ET QA +++ G +++G L+ PLPAD F++ Sbjct: 739 LASQLDLAVVAEGVETPHQAAFLLRHGCPFMQGHLLNKPLPADDFMQ 785 >UniRef50_C6WZ79 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylotenera mobilis JLW8 RepID=C6WZ79_METML Length = 1250 Score = 80.1 bits (196), Expect = 1e-13, Method: Composition-based stats. Identities = 42/156 (26%), Positives = 82/156 (52%) Query: 187 ITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSLRRIRNNN 246 +++N++ + D + I G + L L+ + L I + + +++ Sbjct: 1091 LSVNVSAKQFRQADFVEQVTTAIARHGINPMLLKLELTESALLDHIEDAVAIMNALKDIG 1150 Query: 247 VYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSKQLHIDV 306 + SL+DFG GY+ L +L+ +P + + ++ DI S+ I TII ++ L+++V Sbjct: 1151 IRFSLDDFGTGYSSLQYLRLLPLYQLKIDRSFVRDIASSIGNQAIVRTIIAMAHTLNLNV 1210 Query: 307 IADGIETKKQAGYMIERGVKYLKGIALSSPLPADAF 342 IA+G+ET+ Q G +++ G + +G S P+P DAF Sbjct: 1211 IAEGVETQVQQGILLDSGCMHYQGYLFSEPVPIDAF 1246 >UniRef50_C3J4U2 Diguanylate phosphodiesterase n=1 Tax=Geobacillus sp. Y412MC52 RepID=C3J4U2_9BACI Length = 348 Score = 80.1 bits (196), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 38/116 (32%), Positives = 69/116 (59%) Query: 237 SSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTII 296 ++L R++ V LS++DFG GY+ L++L+ + V + +T D + II +TII Sbjct: 231 ANLHRLKEMGVRLSIDDFGTGYSSLAYLKQLDIDTVKIDRTFIADCPHSHYGSIITSTII 290 Query: 297 DLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLLASLKQ 352 L++ L ++V+A+G+E ++Q Y+ E+G + +G P+PAD L S+K+ Sbjct: 291 SLARHLGMNVVAEGVEREEQLEYLREKGCQEAQGYLFRPPMPADEAAGLLARSIKR 346 >UniRef50_A7GAB5 Multisensor diguanylate cyclase/phophodiesterase n=11 Tax=Clostridium RepID=A7GAB5_CLOBL Length = 892 Score = 80.1 bits (196), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 61/241 (25%), Positives = 119/241 (49%), Gaps = 18/241 (7%) Query: 117 IYYQPIYNAKNGNIAGCDVTIALKNSDG----SAFALDSDRINYNPN-DNKVSYLFGHIN 171 +Y+QPIY+ K I + + K + + F + I N DN V +N Sbjct: 659 VYFQPIYHLKTSKIIAMESLVRWKFDNKIISPNQFIPLAKNIGEIANIDNWV------LN 712 Query: 172 KLFSPI-----KNNLPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTK 226 K S +NN P ++++NI+ + + + L+ ++ E L L+ + Sbjct: 713 KACSQCNLWQKQNNKP--LYVSVNISFKQMKDKNFVDNVLNILRTTKLEPSYLCLEITED 770 Query: 227 EELYIIRRYQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNS 286 E + + +L ++ + + +SL+DFG GY+ LS++ +P + + K++ +I ++ Sbjct: 771 EAMEDVDLSIKTLEALKRHGIKISLDDFGTGYSSLSYVTKLPIDNIKIDKSIIKNIHKDN 830 Query: 287 LTDIIATTIIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKL 346 + I +II +SK L I+++A+G+ET +Q + E G +++G +S PLP F K Sbjct: 831 KSLQIVKSIILMSKSLDINIVAEGVETIEQLEILQELGCDFIQGFYISEPLPIKTFQSKF 890 Query: 347 L 347 + Sbjct: 891 I 891 >UniRef50_B9MBY4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Diaphorobacter sp. TPSY RepID=B9MBY4_DIAST Length = 790 Score = 80.1 bits (196), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 61/251 (24%), Positives = 105/251 (41%), Gaps = 23/251 (9%) Query: 111 SMAHYNIYYQPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDN-KVSYLFGH 169 + H +YYQP G I G + + LD +P V+ G Sbjct: 544 AQGHLRLYYQPQVCIVTGRIMGAEALVRW---------LDPQEGMISPARFIPVAETSGV 594 Query: 170 INKLFSPI------------KNNLPHGFFITININPEDILTCDIERECLHFIKVFGTERI 217 I L + + LP + IN++P D+ +K G Sbjct: 595 IGPLGQWVMRAACEQGQRWRADGLPE-IRLAINLSPRQFQLTDVAACAAEALKASGFPAR 653 Query: 218 RLVLQFSTKEELYIIRRYQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKT 277 L L+ + ++ L+R++ V ++++DFG GY+ L+HL+ P + + + Sbjct: 654 CLELELTESVLAERPDEIRAVLQRLQQLGVRMAVDDFGTGYSSLAHLKRFPIDVLKIDQG 713 Query: 278 MFHDIESNSLTDIIATTIIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPL 337 DI ++ I+ I+ + L + V+A+G+ET +Q ++ ERG +G S PL Sbjct: 714 FIRDIPRSADDMAISAAIVAMGHSLGLSVLAEGVETPQQLAFLRERGCDAYQGYLCSRPL 773 Query: 338 PADAFVRKLLA 348 PA+ F R L A Sbjct: 774 PAEEFARLLQA 784 >UniRef50_Q20XI9 Diguanylate cyclase/phosphodiesterase n=11 Tax=Bradyrhizobiaceae RepID=Q20XI9_RHOPB Length = 915 Score = 80.1 bits (196), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 57/242 (23%), Positives = 105/242 (43%), Gaps = 16/242 (6%) Query: 115 YNIYYQPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINKLF 174 + IYYQPI +NG++ GC+ + ++ + + P V+ G IN+L Sbjct: 666 FEIYYQPIVELRNGDVIGCEALLRWRHPQRGMIS----PAKFIP----VAEATGLINELG 717 Query: 175 SPI-------KNNLPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKE 227 + N P + +N++P + + + + G RL L+ + Sbjct: 718 EWVLRTACAEAANWPAEMSVAVNVSPVQFKSRTLPLKVAAALAASGLPASRLELEITEAV 777 Query: 228 ELYIIRRYQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSL 287 + S L ++ V ++L+DFG GY+ LS+LQ PF + + + I Sbjct: 778 LIDDDETALSVLHELKTLGVRIALDDFGTGYSSLSYLQRFPFDKIKIDRCFIDGIARPDG 837 Query: 288 TDIIATTIIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLL 347 I +++++ H+ A+G+ET +Q + G +++G L SP A VR+L Sbjct: 838 ASAIVQAVVNIATARHMTTTAEGVETAEQRDLLRGLGCTHMQGY-LFSPAIAPDTVRQLF 896 Query: 348 AS 349 A Sbjct: 897 AG 898 >UniRef50_Q2SQ18 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SQ18_HAHCH Length = 721 Score = 80.1 bits (196), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 41/133 (30%), Positives = 77/133 (57%), Gaps = 3/133 (2%) Query: 221 LQFSTKEELYI--IRRYQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTM 278 L+F EE++I I + L + LS++DFG+GY+ L++L++ P S + + ++ Sbjct: 582 LEFELTEEVFIQNIESNMAHLNELIKMGFRLSIDDFGVGYSSLAYLKHFPISCIKIDRSF 641 Query: 279 FHDIESNSLTDIIATTIIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLP 338 +E+N+ +I +I ++ L++ V+A+G+ET+ QA Y+ ++G +G + PLP Sbjct: 642 VSQLETNADDRVIINAVIAMAHNLNLSVVAEGVETEAQAAYLQKQGCDEAQGYLFAKPLP 701 Query: 339 ADAFVRKLLASLK 351 D KL SL+ Sbjct: 702 PDQLY-KLATSLR 713 >UniRef50_Q13LN9 Diguanylate cyclase/phosphodiesterase n=6 Tax=Burkholderia RepID=Q13LN9_BURXL Length = 657 Score = 80.1 bits (196), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 41/165 (24%), Positives = 81/165 (49%) Query: 182 PHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSLRR 241 P +++ N++ DI T R + + G R+ + + + + SL Sbjct: 479 PPELYLSFNLSAIDICTSARARRLIDIVMASGVPPHRVSFEITETAVTRDFEQARCSLTV 538 Query: 242 IRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSKQ 301 I+ +SL+DFG GY+ LS++ +PF + + ++ D++SNS + I +++DL + Sbjct: 539 IKKAGCRVSLDDFGTGYSSLSYVHRLPFDTIKIDRSFMTDVDSNSASKKIVKSVLDLCRN 598 Query: 302 LHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKL 346 L ++ + +G+ET Q + G + ++G S P+ A A L Sbjct: 599 LGLECVVEGLETASQVEVVKALGARAMQGYLFSRPMRASAVAEYL 643 >UniRef50_B5VXY3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Arthrospira RepID=B5VXY3_SPIMA Length = 1092 Score = 80.1 bits (196), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 42/159 (26%), Positives = 84/159 (52%) Query: 184 GFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSLRRIR 243 G ++ +N++P + T ++ + I G L L+ + + + + QS ++++ Sbjct: 926 GLWVAVNMSPRQLRTPNLVNVIIEAIANNGLSSDCLELEITERSLVEEVPGVQSLIKQLN 985 Query: 244 NNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSKQLH 303 + + L+++DFG GY+ LS+L+ PFS + + K+ D+ + + T+I ++ L Sbjct: 986 HLKIRLAIDDFGTGYSSLSYLKRFPFSVLKIDKSFISDLPDDQDAIALVKTMITMAHGLG 1045 Query: 304 IDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAF 342 + V+A+GIET Q ++ +G Y +G S PLP F Sbjct: 1046 LVVVAEGIETTAQLDFLCNQGCDYGQGYLFSKPLPPAQF 1084 >UniRef50_A1VFP9 Periplasmic sensor diguanylate cyclase/phosphodiesterase n=5 Tax=Desulfovibrio vulgaris RepID=A1VFP9_DESVV Length = 951 Score = 79.7 bits (195), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 65/243 (26%), Positives = 108/243 (44%), Gaps = 17/243 (6%) Query: 118 YYQPIYNAKNGNIAGCDVTI-----ALKNSDGSAF---ALDSDRINYNPNDNKVSYLFGH 169 +YQPI N ++G + G + L N S F A D+ RI + H Sbjct: 703 HYQPIVNLESGALEGFEALARWQHPTLGNIPPSTFIPIAEDTGRII------PLGRAMLH 756 Query: 170 INKLFSP-IKNNLPHG-FFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKE 227 F+ I+ LP G I +N++P L+ + RE + G LVL+ + Sbjct: 757 KACAFAASIRGTLPQGDPVIHVNLSPRQFLSRQLLREVEAALDATGLPPELLVLEITESL 816 Query: 228 ELYIIRRYQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSL 287 + R +S + ++ V LSL+DFG GY+ L LQ+ P V + ++ + Sbjct: 817 LMENPRVAKSIMAGLKEIGVRLSLDDFGTGYSSLGSLQDYPLDSVKIDRSFIRAMNDGRD 876 Query: 288 TDIIATTIIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLL 347 + I I+ L L ++ I +G+ET QA ++ G ++G + P+P++ R LL Sbjct: 877 AEHIVRAILKLVSHLRLEAICEGVETTMQAANLMAFGATRMQGFLFAKPMPSEK-ARSLL 935 Query: 348 ASL 350 L Sbjct: 936 ERL 938 >UniRef50_B5JV46 Two-component response regulator n=1 Tax=gamma proteobacterium HTCC5015 RepID=B5JV46_9GAMM Length = 842 Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 56/231 (24%), Positives = 109/231 (47%), Gaps = 4/231 (1%) Query: 119 YQPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYL-FGHINKLFSPI 177 YQ I ++ G +G + + ++S D + I + ++S L + +N + Sbjct: 602 YQAIVSSDTGRTSGFEALVRWQHSQYGKIRPD-ELIELAADSQQLSALTYWVLNTAAQQL 660 Query: 178 K--NNLPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRY 235 N+ +++NI D+ + + ++ + L L+ + E + I Sbjct: 661 GEWQNIDPNLTMSVNICATFFAQDDLVHDIIDTLERHHVQPSTLRLEITESEIIEHISES 720 Query: 236 QSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTI 295 ++L R+ N+ + L+DFG GY+ +L + P + + K+ HDIE + I+ I Sbjct: 721 MNNLNRLHQANIPVYLDDFGTGYSSFHYLASYPIHTLKIDKSFMHDIERDEKGGIVVKNI 780 Query: 296 IDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKL 346 I L + L + VIA+G+E K+QA ++ + Y++G S PLP D V+ + Sbjct: 781 ITLCRDLGLAVIAEGVENKRQAQFLKQLNCDYIQGYLYSKPLPKDDAVQHI 831 >UniRef50_A6EV43 Sensory box protein/GGDEF domain protein n=1 Tax=Marinobacter algicola DG893 RepID=A6EV43_9ALTE Length = 611 Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 37/111 (33%), Positives = 65/111 (58%) Query: 237 SSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTII 296 S L + + LS++DFG GY+ LS L+++PFS + + ++ + + I +II Sbjct: 498 SILEELVADGASLSIDDFGTGYSSLSRLKSLPFSRIKIDRSFISQLPDDEDDCAITLSII 557 Query: 297 DLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLL 347 L++ L + V+A+G+ETK +++E+G YL+G S PLP +A + K Sbjct: 558 GLARGLGLSVVAEGVETKAHEQWLVEQGCDYLQGYLYSKPLPFNALMDKFF 608 >UniRef50_A4BCU3 Response regulator/sensory box/GGDEF domain/EAL domain protein n=1 Tax=Reinekea blandensis MED297 RepID=A4BCU3_9GAMM Length = 723 Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 56/239 (23%), Positives = 102/239 (42%), Gaps = 13/239 (5%) Query: 114 HYNIYYQPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINKL 173 ++IY QP ++ G ++ I DGS D + P ++ + + Sbjct: 474 EFDIYLQPKICMATESVIGAEILIRWPRPDGSFLPPDV----FIPKAEEMGLIHDIGEWV 529 Query: 174 FSPI---------KNNLPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFS 224 F +N +P F INI+ + T + + +K G + L ++ + Sbjct: 530 FRETCDTIRSWQQQNRIPLDFTFAINISMRQLHTGHLAEDIAAIVKEVGIDPNCLEVEVT 589 Query: 225 TKEELYIIRRYQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIES 284 + R +L + + +S++DFG GY+ LSHL+ +P + + K+ +ES Sbjct: 590 ESIMMQDPRVTIDALNALHQQKIKISIDDFGTGYSSLSHLRQLPIDAIKIDKSFVQALES 649 Query: 285 NSLTDIIATTIIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFV 343 + D I TII L L + VIA+GIET+ + G +G + P+ + F+ Sbjct: 650 DGQADAIVNTIISLGHNLDMRVIAEGIETEANRQALTAAGCDVAQGYFYAKPMCREDFL 708 >UniRef50_Q1ASD1 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Rubrobacter xylanophilus DSM 9941 RepID=Q1ASD1_RUBXD Length = 1101 Score = 79.7 bits (195), Expect = 2e-13, Method: Composition-based stats. Identities = 42/155 (27%), Positives = 84/155 (54%) Query: 187 ITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSLRRIRNNN 246 +++NI+ ++ D E ++ G E LVL+ + + +L+R+R Sbjct: 919 VSVNISARQLVRPDFVEEVGRILQRTGLEPEGLVLEVTESAAMDEPGEAARALQRLRERG 978 Query: 247 VYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSKQLHIDV 306 V L+L+DFG GY+ LS+L+ +P ++ + ++ + +S + ++ +I LS++L + Sbjct: 979 VRLALDDFGTGYSSLSYLRRLPVCFLKIDRSFVEGLGGDSGSGVLVGGVIALSRELGFEP 1038 Query: 307 IADGIETKKQAGYMIERGVKYLKGIALSSPLPADA 341 +A+GIET Q ++E G + +G +SP+P A Sbjct: 1039 VAEGIETPGQLERLLELGCELGQGYYFASPMPEGA 1073 >UniRef50_D0Z2V6 Rtn protein n=1 Tax=Photobacterium damselae subsp. damselae CIP 102761 RepID=D0Z2V6_LISDA Length = 488 Score = 79.3 bits (194), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 41/129 (31%), Positives = 72/129 (55%) Query: 219 LVLQFSTKEELYIIRRYQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTM 278 +VL+ + ++L Q+ + +R V +L+D+G GY+ L +L+ I F Y+ + K+ Sbjct: 360 VVLELTENQQLVQTDTAQTMMASMRKFGVKFALDDYGTGYSTLDYLRKIKFDYLKIDKSF 419 Query: 279 FHDIESNSLTDIIATTIIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLP 338 I S+ +++ I II L+ +L+I +IA+GIE +Q + RGV Y +G P+ Sbjct: 420 VDHITSDDVSNAIIDNIIALADRLNIRIIAEGIEQPEQVEILKSRGVVYFQGYLYGKPML 479 Query: 339 ADAFVRKLL 347 D F KL+ Sbjct: 480 LDEFASKLV 488 >UniRef50_A1K7N9 GGDEF/EAL/PAS-domain containing protein n=1 Tax=Azoarcus sp. BH72 RepID=A1K7N9_AZOSB Length = 889 Score = 79.3 bits (194), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 60/245 (24%), Positives = 118/245 (48%), Gaps = 13/245 (5%) Query: 110 ESMAHYNIYYQPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGH 169 ESM + +YYQP+ +G + G + + L+ DG +D I ++ L Sbjct: 647 ESM--FEMYYQPLVALNSGEVLGAEALVRLR-PDGGPRIGPADFIPVLEESGMIAELGRW 703 Query: 170 INK-LFSPIKNNLPHGF---FITININPEDILTCDIERECLHFIKVFGTERIRLVLQFST 225 + + + + L G+ +T+N++ E++ + + G +L ++ + Sbjct: 704 VQREVCRQGRAWLDAGYDFQLLTLNLSAEEVRRGGVVDNLREVLAETGFPAEKLEVEIT- 762 Query: 226 KEELYIIRRYQSSLR---RIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDI 282 E +++R +L ++ V LS++DFG GY+ LS+L+ P + + + + DI Sbjct: 763 --ESGLMQRGSEALDFLYELKGLGVRLSIDDFGTGYSSLSYLKLFPVNKLKIDRGFITDI 820 Query: 283 ESNSLTDIIATTIIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAF 342 + + TTII L++ L +DV+A+G+ET+ Q ++ E+G +G S P+ A F Sbjct: 821 PEDQNDVQLTTTIIALARNLGLDVLAEGVETEAQRTFLAEKGCDAYQGYLCSPPVEAAVF 880 Query: 343 VRKLL 347 + L Sbjct: 881 QERFL 885 >UniRef50_B2UHD8 PTS system, lactose/cellobiose family IIC subunit n=3 Tax=Ralstonia RepID=B2UHD8_RALPJ Length = 723 Score = 79.3 bits (194), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 42/160 (26%), Positives = 85/160 (53%), Gaps = 1/160 (0%) Query: 178 KNNLPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQS 237 ++ LP F + +N++P +L C + R L + G +L L+ + L Sbjct: 544 RDVLPDDFVVAVNLSPRQLLDCRLYRNVLDILHREGLSPTQLELEITESTMLLPDITAIG 603 Query: 238 SLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIID 297 +L+++R V ++L+DFGMG+ L +L+ +P V + +++ D+ + S+ + I +I Sbjct: 604 NLKQLREAGVKVALDDFGMGHTSLHYLRELPLDTVKIDRSL-ADVSAGSVNEHIVRSIAS 662 Query: 298 LSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPL 337 LS+ L++ + +G+ET++Q + G + +G S PL Sbjct: 663 LSRTLNLSTVVEGVETEQQLERLSALGCERFQGYFFSRPL 702 >UniRef50_B1M2C0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylobacterium radiotolerans JCM 2831 RepID=B1M2C0_METRJ Length = 703 Score = 79.3 bits (194), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 40/166 (24%), Positives = 79/166 (47%) Query: 183 HGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSLRRI 242 H + +N++P D+ L + G RL L+ + + + R LRR+ Sbjct: 523 HPLKVAVNLSPRQFQQADLPERVLAILTETGLAPTRLELEITETLIINDMARALGILRRL 582 Query: 243 RNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSKQL 302 + V ++++DFG GY+ L+ LQ PF + + ++ +E + +I ++ L + L Sbjct: 583 KAFGVSIAMDDFGTGYSSLATLQAFPFDKIKIDRSFVGHVEVSPQAAVIVRAVLGLGRSL 642 Query: 303 HIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLLA 348 + V+A+G+ET Q ++ +G +S P P + F ++ A Sbjct: 643 GMSVVAEGVETDAQMRFLAAEACDEAQGYLISKPQPIERFAEQIDA 688 >UniRef50_A4SJC3 GGDEF domain protein n=2 Tax=Aeromonas RepID=A4SJC3_AERS4 Length = 667 Score = 79.3 bits (194), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 56/254 (22%), Positives = 113/254 (44%), Gaps = 18/254 (7%) Query: 99 SSVLPVVSSKGESMAHYNIYYQPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNP 158 ++ LP+ G+ A YQPI + +N + G ++ + + + D + P Sbjct: 417 AAQLPLAIKSGQLTA----VYQPIISTRNNQLHGAELLCRWPHPELGMISPD----EFIP 468 Query: 159 NDNKVSYLFGHINK--------LFSPIKNNLPHGFFITININPEDILTCDIERECLHFIK 210 ++ L G + + + + P ++IN++P D+ + I+ Sbjct: 469 LAEELG-LIGQLGQRMLEQGCAQLARWQGAAPD-LVLSINLSPLQFRDPDLCPQIFACIE 526 Query: 211 VFGTERIRLVLQFSTKEELYIIRRYQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFS 270 G +L L+ + + +S+L + L+++DFG GY L++L + + Sbjct: 527 RHGLAPWQLELEITEGVLMENADEIESNLANLIEAGFQLAIDDFGTGYCSLAYLPRLQVA 586 Query: 271 YVNLHKTMFHDIESNSLTDIIATTIIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKG 330 + L ++ + +N T I ++I L +L I + A+G+ET +Q ++++ G L+G Sbjct: 587 TLKLDRSFTQGLATNQATTAIVRSVIGLGHELGIRITAEGVETPEQQAWLVQAGCDRLQG 646 Query: 331 IALSSPLPADAFVR 344 S PLP D F R Sbjct: 647 YLFSRPLPPDEFAR 660 >UniRef50_C6NYX6 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Acidithiobacillus caldus ATCC 51756 RepID=C6NYX6_9GAMM Length = 353 Score = 79.3 bits (194), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 53/226 (23%), Positives = 105/226 (46%), Gaps = 8/226 (3%) Query: 116 NIYYQPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINKLFS 175 ++YQPI + +G I + ++ + G+ + L + + +N + + S Sbjct: 2 EVHYQPILDTFSGRIVAIEALARMREASGTIY-LPAQFLPQMSVENGAELSRVVLTRALS 60 Query: 176 PIKNNLPHGFFITININPEDILTCDIERECL----HFIKVFGTERIRLVLQFSTKEELYI 231 + G+ + I+ N + ++REC+ ++ G E R+ ++ + Sbjct: 61 DLARLDQGGYRLGISFN---LSPLSLDRECVSCLRKVVQESGIEAHRITVEILESSDFSD 117 Query: 232 IRRYQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDII 291 I R +LR IR + L+L+D G YA L L+N+P + L ++ +E I Sbjct: 118 IDRAIETLREIRELGLELALDDMGSAYASLLRLKNLPVGKIKLDQSFVSSLERTPEDLHI 177 Query: 292 ATTIIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPL 337 I DL+ L +D++A+G+ET+ ++ G+ ++G A+S PL Sbjct: 178 VRAIQDLAADLRLDLVAEGVETEAVLDTLVTMGIPAVQGFAVSHPL 223 >UniRef50_Q89S23 Blr2589 protein n=1 Tax=Bradyrhizobium japonicum RepID=Q89S23_BRAJA Length = 618 Score = 79.3 bits (194), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 38/155 (24%), Positives = 81/155 (52%) Query: 182 PHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSLRR 241 P + +N++P + D+ER + G RL ++ + + R + LRR Sbjct: 444 PRPLQVAVNLSPVQVQAGDLERSIHQILLETGLAPTRLEVEITEGVLIGDFTRALNLLRR 503 Query: 242 IRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSKQ 301 ++ + ++++DFG GY+ LS+LQ+ PF + + ++ ++E+ + I ++ L+ Sbjct: 504 LKALGIRIAMDDFGTGYSSLSYLQSFPFDKIKIDRSFISNLEATPQSAEIVRAVLSLAHA 563 Query: 302 LHIDVIADGIETKKQAGYMIERGVKYLKGIALSSP 336 L+I VIA+G+ET+ Q ++ + ++G + P Sbjct: 564 LNIPVIAEGVETEAQRAFLAREACEEMQGYLVGRP 598 >UniRef50_B6JGP3 Diguanylate cyclase/phosphodiesterase n=1 Tax=Oligotropha carboxidovorans OM5 RepID=B6JGP3_OLICO Length = 825 Score = 79.3 bits (194), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 47/164 (28%), Positives = 81/164 (49%) Query: 180 NLPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSL 239 + P I IN++P D+ + G RL ++ + + R S L Sbjct: 625 SWPKPLSIAINVSPMSFQHNDLPGLIHSILLETGLNPKRLEIEITEGVLVQDFSRACSIL 684 Query: 240 RRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLS 299 RRI+N V ++++DFG GY+ LS+LQ+ PF + + + I N + I II L Sbjct: 685 RRIKNLGVRVAMDDFGTGYSSLSYLQSFPFDKIKIDQAFVAQINKNVQSSAIIRAIISLG 744 Query: 300 KQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFV 343 + L++ VIA+G+ET+ Q ++ + G ++G + P P A+ Sbjct: 745 EALNLGVIAEGVETELQRDFLADAGCFEMQGYLIGRPQPIAAYA 788 >UniRef50_D1VQL1 Diguanylate cyclase/phosphodiesterase with GAF sensor n=1 Tax=Frankia sp. EuI1c RepID=D1VQL1_9ACTO Length = 1113 Score = 79.3 bits (194), Expect = 2e-13, Method: Composition-based stats. Identities = 59/240 (24%), Positives = 110/240 (45%), Gaps = 4/240 (1%) Query: 117 IYYQPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINKLFSP 176 +YYQP+ +A G ++G + + + + S + + + +++ Sbjct: 368 LYYQPLQDAATGRVSGVEALVRWCHPERGLLPPGSFLPMAERSTLIIDLTWWELDEALGQ 427 Query: 177 IKNNLPHGFFITI--NINPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRR 234 + G I + N++ ++ D+ R ++ + L L+ + + R Sbjct: 428 CAAWVREGLHIPVSANLSARMLVVDDLPRLITRRLEAYDLPPDMLTLEITESALISQPAR 487 Query: 235 YQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDI-IAT 293 + L +R V L+L+DFG GY+ + L+ +PF + + K D SL D+ I Sbjct: 488 AATMLGELRTAGVKLALDDFGTGYSSMEILKALPFDEMKIDKGFVADARG-SLPDVAIVR 546 Query: 294 TIIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLLASLKQV 353 ++IDL +L + V+ +G+E ++ A +IE GV L+G ALS PLPAD L + V Sbjct: 547 SVIDLGHRLGLRVVGEGVEDEESARMLIELGVDLLQGDALSPPLPADELAALLRGGYRPV 606 >UniRef50_B6BNH0 Sensory box/ggdef domain/eal domain protein n=1 Tax=Campylobacterales bacterium GD 1 RepID=B6BNH0_9PROT Length = 760 Score = 79.3 bits (194), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 66/281 (23%), Positives = 123/281 (43%), Gaps = 26/281 (9%) Query: 83 FKAYLQPKNIICDNFNSSV-------LPVVSSKGESMAH--YNIYYQPIYNAKNGNIAGC 133 +KA Q +N C F + L + S E++ H + +YYQPI K+ I C Sbjct: 483 YKAKQQGRNTTC-FFEQGMSKKIEDQLILGSELREALKHNQFELYYQPIVETKSSIITSC 541 Query: 134 DVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHI--------NKLFSPIKNNLPHGF 185 + I N D I Y + + + K+ IKN Sbjct: 542 EALIRW-NHPTRGLIYPDDFIPYAEESGLIISIGDWVIQRACIDYKKINHKIKN------ 594 Query: 186 FITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSLRRIRNN 245 I+INI+ + D + L + + L L+ + L + + ++++ Sbjct: 595 -ISINISSKQFNQDDFVTKILKATQEYSVNPSALKLELTESVALDNLLATTDKMNLLKSH 653 Query: 246 NVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSKQLHID 305 ++++DFG GY+ LS+L+N+PF ++ + ++ + N + TI+ +SKQ + Sbjct: 654 GFTIAMDDFGTGYSSLSYLKNLPFDFLKIDRSFIQHVLDNEDDASLVKTILTISKQFKFE 713 Query: 306 VIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKL 346 VIA+G+E K+ ++ + +Y +G +S LP + F + L Sbjct: 714 VIAEGVEEKEHVEFLKDLDCEYYQGFVVSKALPVNEFEKFL 754 >UniRef50_C0D662 Putative uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D662_9CLOT Length = 213 Score = 79.3 bits (194), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 44/164 (26%), Positives = 82/164 (50%), Gaps = 4/164 (2%) Query: 187 ITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQ--SSLRRIRN 244 I++N++ D+ D+ L ++ G + L L+ + E Y+ Q + +RR+R Sbjct: 45 ISVNVSRIDLYHEDLLESLLGMVRENGLDPGELHLEIT--ESAYVKDSVQLVTVIRRLRQ 102 Query: 245 NNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSKQLHI 304 + + ++DFG GY+ L+ L +P + L E + IIDL+++L + Sbjct: 103 DGFVIEMDDFGSGYSSLNTLSELPIDTLKLDLNFLRQAEHQPRRQKVMRLIIDLARELRL 162 Query: 305 DVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLLA 348 V+A+G+ET+ QA + G +Y +G P+P + F R+ L Sbjct: 163 QVVAEGVETEAQAALLKAMGCRYAQGYLFGRPMPEERFFREYLG 206 >UniRef50_A0NTL0 Putative uncharacterized protein n=1 Tax=Labrenzia aggregata IAM 12614 RepID=A0NTL0_9RHOB Length = 548 Score = 79.3 bits (194), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 52/236 (22%), Positives = 119/236 (50%), Gaps = 18/236 (7%) Query: 118 YYQPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINKLFSPI 177 YYQP+ + ++G + GC++ + + +G + + Y N+ + + HI ++ S Sbjct: 283 YYQPVMDIESGRLRGCEILMRWRRPNGMIVS-PGQFMAYAENNGHIFDMTRHIMRVSSEE 341 Query: 178 KNNLPHGFFITININPEDILTCDI------ERECLHFIK-VFGTERI---RLVLQFSTKE 227 +L NP+ L+ ++ +RE + I+ +F RI ++V++ + + Sbjct: 342 IGDL-------YGDNPDLKLSINLFAGHFLDREVISDIRSIFEKSRISFQQIVVEVTERH 394 Query: 228 ELYIIRRYQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSL 287 L + + + ++ V ++L+D G G+ +++LQ + + + K I S+ Sbjct: 395 PLEDMELARKIIAELQALGVRVALDDVGTGHGGMAYLQKLGVDIIKIDKMFIDTIGSDDN 454 Query: 288 TDIIATTIIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFV 343 + I ++++L+ L + +IA+G+E ++Q ++E GV +G ++P+PAD F+ Sbjct: 455 STTIVDSMVELADNLGMGIIAEGVEMEEQIDRLLELGVTAAQGYYFAAPMPADEFI 510 >UniRef50_C1D4T3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1D4T3_LARHH Length = 702 Score = 79.3 bits (194), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 52/229 (22%), Positives = 105/229 (45%), Gaps = 11/229 (4%) Query: 117 IYYQPIYNAKNGNIAGCDV-------TIALKNSDGSAFALDSDRINYNPNDNKVSYLFGH 169 + YQP N +NG +AG + T+ + D +S + + D ++ Sbjct: 451 LAYQPQLNLRNGRVAGVEALLRWNHPTLGMVPPDEFIQVAESCGLILSLGD----WVMER 506 Query: 170 INKLFSPIKNNLPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEEL 229 + + + F + IN++ + + + + + R+ L+ + + Sbjct: 507 ACAQLASWRELYGYDFIVAINLSAAQLCDPLLVDKLQELVVRYALPADRIELELTESMLV 566 Query: 230 YIIRRYQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTD 289 + + L + + + LS++DFG GY+ L+ L+ +P + + ++ DIE+NS Sbjct: 567 EDMNQALGVLHALEDIGIQLSIDDFGTGYSNLAQLRQLPIKRLKIDRSFIQDIETNSNAR 626 Query: 290 IIATTIIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLP 338 I T++ +++ L + V+A+G ET QA Y+ E G YL+G L+ LP Sbjct: 627 GIVDTVMAMARTLDMTVVAEGAETDAQAVYLAELGCDYLQGWWLARGLP 675 >UniRef50_C7LTY3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfomicrobium baculatum DSM 4028 RepID=C7LTY3_DESBD Length = 1075 Score = 79.0 bits (193), Expect = 2e-13, Method: Composition-based stats. Identities = 58/238 (24%), Positives = 110/238 (46%), Gaps = 19/238 (7%) Query: 115 YNIYYQPIYNAKNGNIAGCDVTIALKN-----SDGSAFALDSDRINYNPNDNKVSYLFGH 169 + ++YQP+ + ++G+I G + I + S L + P + V H Sbjct: 832 FELFYQPLVHIQSGHILGAEALIRWRCEGKLISPAEFIPLAEESALILPLGDWVLRTAAH 891 Query: 170 INKLFSPIKNNLPHGFFITININPEDILTCDIE---RECLHFIKVFGTERIRLVLQFSTK 226 KL+ + H +++NI+ D+ RE L TE L F Sbjct: 892 QAKLW----QDAGHDLTMSVNISSRQFSGADLAVTLREVL-----LDTELRPGRLYFEIT 942 Query: 227 EELYI--IRRYQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIES 284 E + + + + +++L +R L+DFG GY+ LS+L+ +P + + ++ DI Sbjct: 943 ESMLMGDVSKAETTLLNLREAGGTFFLDDFGTGYSSLSYLKRLPIDGLKIDRSFIKDITD 1002 Query: 285 NSLTDIIATTIIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAF 342 +S + I I+ +++ L++ ++A+G+ET+ Q G + G L+G S P+PA F Sbjct: 1003 DSDSRAIVAAIVSMARTLNLRIVAEGVETQAQRGLLASMGPIVLQGYLASRPVPAQDF 1060 >UniRef50_D0L1D4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Halothiobacillus neapolitanus c2 RepID=D0L1D4_HALNC Length = 958 Score = 79.0 bits (193), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 42/162 (25%), Positives = 87/162 (53%), Gaps = 4/162 (2%) Query: 178 KNNLPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQS 237 +N +P + +N++P +++ + E ++ + + R++L+ + L+ RY+S Sbjct: 783 ENGIPFQGHMAVNVSPWQLISTNFVNEIKQIVEQYPLDPKRIMLEVTESTLLH--NRYES 840 Query: 238 --SLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTI 295 L ++R+ +SL+DFG GY+ LS+L++IP + + K+ ++E + +I Sbjct: 841 IAKLEQLRHLGFKISLDDFGTGYSSLSYLKDIPLDQLKIDKSFIDELEKTDDEQPLLASI 900 Query: 296 IDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPL 337 + +H+ +IA+G+ET+ Q +I G K +G S PL Sbjct: 901 YAIGIHMHLAIIAEGVETQNQCERLISMGGKAFQGYLFSKPL 942 >UniRef50_C6X7I8 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6X7I8_METSD Length = 821 Score = 79.0 bits (193), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 40/101 (39%), Positives = 63/101 (62%) Query: 238 SLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIID 297 +L RI + V LSL+DFG GY+ LS+L+ +P + + + K+ +DI + IIA +II Sbjct: 703 TLNRISDLGVQLSLDDFGTGYSSLSYLKRLPINRLKIDKSFINDITTTYNDAIIARSIIA 762 Query: 298 LSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLP 338 L+ L I VIA+G+E+ Q +++E G ++G LS P P Sbjct: 763 LAHSLEIQVIAEGVESADQYAFLLENGCDEVQGYLLSRPRP 803 >UniRef50_B1Y791 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Leptothrix cholodnii SP-6 RepID=B1Y791_LEPCP Length = 1066 Score = 79.0 bits (193), Expect = 2e-13, Method: Composition-based stats. Identities = 42/154 (27%), Positives = 81/154 (52%) Query: 187 ITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSLRRIRNNN 246 I IN++P++I + ++ G RL L+ + + R ++ L R+R Sbjct: 891 IAINLSPQEIRRGQTDERVREALERSGLPAERLELELTESGLMEQGERAEAFLHRLRALG 950 Query: 247 VYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSKQLHIDV 306 V L+++DFG GY+ L++L+ P S + + ++ D+ +++ + T++ + + L I V Sbjct: 951 VRLAIDDFGTGYSSLAYLKRFPVSKLKIDRSFVRDLPADANDAQLVQTMVSMGRNLGISV 1010 Query: 307 IADGIETKKQAGYMIERGVKYLKGIALSSPLPAD 340 +A+G+ET+ Q Y+ G +G S P PAD Sbjct: 1011 LAEGVETEAQFDYLRSLGCDAAQGYFFSPPRPAD 1044 >UniRef50_D2UAD2 Hypothetical c-di-gmp phosphodiesterase or signal transduction protein n=1 Tax=Xanthomonas albilineans RepID=D2UAD2_XANAL Length = 864 Score = 79.0 bits (193), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 37/110 (33%), Positives = 64/110 (58%) Query: 239 LRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDL 298 LR+++++ V LSL+DFG GY+ LSHL +P + + L + D+E + + + T+++ + Sbjct: 748 LRQLQSSGVLLSLDDFGTGYSSLSHLHQLPINELKLDMSFVRDLEHSPTSRALTTSVLRI 807 Query: 299 SKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLLA 348 + L + +A+G+ET Q + E G L+G S LPA A + L A Sbjct: 808 GETLGMHTVAEGVETDAQRSLLAELGCGVLQGFLFSRALPASALEQWLQA 857 >UniRef50_A5G085 Diguanylate cyclase/phosphodiesterase n=1 Tax=Acidiphilium cryptum JF-5 RepID=A5G085_ACICJ Length = 705 Score = 79.0 bits (193), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 45/153 (29%), Positives = 79/153 (51%), Gaps = 2/153 (1%) Query: 187 ITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSLRRIRNNN 246 +T+NI+ +L + + H + V G RL ++ + L+ R R+R Sbjct: 525 VTVNISVSHVLVGSLLDDVEHALAVSGLPPSRLKIEITETMFLHDADRSAPLFDRLRQMG 584 Query: 247 VYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSKQLHIDV 306 V + L+DFG G++ LS L N+P + + ++ D N I A I+ +++ L + V Sbjct: 585 VGILLDDFGTGFSSLSFLGNLPIDVIKIDQSFVRDAGRNGYATIEA--ILSIARALGLQV 642 Query: 307 IADGIETKKQAGYMIERGVKYLKGIALSSPLPA 339 A+G+ET +Q ++ERGV ++G S P+PA Sbjct: 643 TAEGVETPEQNRNLVERGVGSVQGYLFSRPIPA 675 >UniRef50_Q9ABX9 Uncharacterized signaling protein CC_0091 n=3 Tax=Caulobacter RepID=Y091_CAUCR Length = 809 Score = 79.0 bits (193), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 53/227 (23%), Positives = 102/227 (44%), Gaps = 3/227 (1%) Query: 117 IYYQPIYNAKNGNIAGCDVTIALKN-SDGSAFALDSDRINYNPNDNKVSYLFGHINKLFS 175 ++YQP+ A +G + G + + K+ + G LD I + + L + + Sbjct: 563 VHYQPLARAADGEVCGFEALVRWKHPTRGMIPPLDF--IPVAEENGLIEALGDWVLRRAC 620 Query: 176 PIKNNLPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRY 235 I +N++P + + + G RL L+ + +R Sbjct: 621 ADAAAWEKPLRIAVNLSPIQLHNPALPTLVHEVLITTGLSPSRLELEITESALFKDYQRA 680 Query: 236 QSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTI 295 +LRR++ V ++++DFG G++ LS LQ+ PF + + K+ +I + I + Sbjct: 681 LDNLRRLKALGVRIAMDDFGTGFSSLSTLQSFPFDKIKIDKSFVENIHRHDRATAIVRAV 740 Query: 296 IDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAF 342 + L + L I V+A+G+ET++Q ++ L+G A+ P P DA Sbjct: 741 LGLGRSLEIPVVAEGVETEEQILFLRGEDCAELQGYAIGRPAPVDAL 787 >UniRef50_Q1NRJ4 PAS:GGDEF:EAL:GAF n=5 Tax=Deltaproteobacteria RepID=Q1NRJ4_9DELT Length = 1052 Score = 79.0 bits (193), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 33/106 (31%), Positives = 63/106 (59%) Query: 237 SSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTII 296 ++L ++++ ++L+L+DFG GY+ LS+L+N P + + + D+ ++ + TII Sbjct: 938 ATLWKLKDMGIHLALDDFGTGYSSLSYLKNFPLDTLKIDREFVRDLSTDDEDRAVIITII 997 Query: 297 DLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAF 342 L+ L ++V+A+G+E Q ++ +RG +G S PLPA F Sbjct: 998 TLAHSLKMEVVAEGVEDADQVAFLRQRGCDVFQGYHFSRPLPAKEF 1043 >UniRef50_Q1K2C5 Diguanylate cyclase/phosphodiesterase n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1K2C5_DESAC Length = 777 Score = 79.0 bits (193), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 35/108 (32%), Positives = 66/108 (61%) Query: 237 SSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTII 296 ++L ++R ++L+++DFG GY+ L++L+ P + + ++ DIE + I ++II Sbjct: 652 ATLNKLRKLGIHLAIDDFGTGYSSLAYLKRFPVHSLKIDRSFIKDIEQSERYATITSSII 711 Query: 297 DLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVR 344 ++ K LH+ VIA+G+ET Q ++ E+ ++G S P+ AD VR Sbjct: 712 EMGKSLHLTVIAEGVETLGQMAFLKEQNCDEIQGFLYSMPVNADEIVR 759 >UniRef50_A8UU60 Putative uncharacterized protein n=1 Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8UU60_9AQUI Length = 954 Score = 79.0 bits (193), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 56/231 (24%), Positives = 109/231 (47%), Gaps = 26/231 (11%) Query: 118 YYQPIYNAKNGNIAGCDVTIALKNSDGSA-------FALDSDRINYNPNDNKVSYLFGHI 170 Y+QPIY N + GC+ + L+ G F L+ + + D + L I Sbjct: 729 YFQPIYRLPNMEVVGCETLLRLRGPRGKIQSPAEFIFVLEKTGLIRDVEDRMLEKLKEFI 788 Query: 171 NKLFSPIKNNLPHG--FFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEE 228 L H F +T N++P+ + K G+ +VL+ + E Sbjct: 789 ----------LRHDKKFMVTFNVSPKSFRDETFVEKVKEVAKSVGSS---MVLEIT--ER 833 Query: 229 LYIIRR--YQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNS 286 L++ L IR++ V ++++DFG GY+ L++L+ +P + + H + +S Sbjct: 834 LFVENPDYAMEFLEDIRSSGVRVAIDDFGTGYSSLAYLETLPVDILKIDMKFVHRMVESS 893 Query: 287 LTDIIATTIIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPL 337 + + TI++L+++L ++ IA+G+E+++Q + G Y++G LS P+ Sbjct: 894 KSLAVVETIVELARKLGMETIAEGVESEEQLRLLKLLGCTYVQGYYLSKPM 944 >UniRef50_C9XWJ5 Protein rtn n=9 Tax=Enterobacteriaceae RepID=C9XWJ5_CROTZ Length = 520 Score = 79.0 bits (193), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 54/246 (21%), Positives = 119/246 (48%), Gaps = 14/246 (5%) Query: 114 HYNIYYQPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINKL 173 + + YQP+ +A I G + + ++ D+ I++ + L H+ KL Sbjct: 281 QFFVVYQPVVDAATRQIRGVEALMRWEHPSAGMIPPDA-FISFAEAQGLIVPLTHHLFKL 339 Query: 174 FSP----IKNNLPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEEL 229 + ++ +LP G + INI P + + + + + +LV + + ++ Sbjct: 340 IAQDVPRLQQSLPPGAKLGINIAPGHLHSEQFKADIQKLHASLPPDYFQLVFEITERD-- 397 Query: 230 YIIRRYQSS--LRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSL 287 +IR ++ + ++++DFG G++ L +L+ Y+ + + + I + ++ Sbjct: 398 -MIREEEAMDLFTWLHEQGHEIAVDDFGTGHSALIYLERFTLDYLKIDRGFVNAIGTETI 456 Query: 288 TDIIATTIIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLL 347 T + +I L+K+L++ +A+G+ET++QA ++ RGV +L+G S P+ A L Sbjct: 457 TSPVLDAVISLAKRLNMVTVAEGVETQEQAKWLTVRGVNFLQGYYFSRPVRA----ADLP 512 Query: 348 ASLKQV 353 AS+K+ Sbjct: 513 ASMKEA 518 >UniRef50_Q1NQ51 PAS:GGDEF:EAL n=1 Tax=delta proteobacterium MLMS-1 RepID=Q1NQ51_9DELT Length = 751 Score = 79.0 bits (193), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 57/243 (23%), Positives = 106/243 (43%), Gaps = 28/243 (11%) Query: 117 IYYQPIYN-AKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHIN---- 171 +YYQP + A + ++ G + I +N +G A D + P K S L G I Sbjct: 518 LYYQPQWQLADSPSVIGAEALIRWRNKEGELIAPD----QFIPLAEK-SGLIGAIGDWVI 572 Query: 172 ----KLFSPIKNNLPHGFFITININPEDILTCDIERECLHFIK-------VFGTERIRLV 220 + ++ + +N++ ++ ++ F E + Sbjct: 573 DEACRQLRIWRDQGKKQLRVAVNVSARQFRAGNLAEVVAQALRKHEIPAHCFELELTESI 632 Query: 221 LQFSTKEELYIIRRYQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFH 280 L +E + L R V ++L+DFG GY+ L++L P + + + ++ Sbjct: 633 LMEKPEEAAEL-------LNRCAALGVGIALDDFGTGYSSLAYLSRFPITVLKIDRSFVR 685 Query: 281 DIESNSLTDIIATTIIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPAD 340 D+ S +IA +II L+ ++ + V+A+G+ET++Q Y+ RG +G S PLPA+ Sbjct: 686 DLNHRSEAALIADSIIALAHRMGLQVVAEGVETEEQRAYLQSRGCDLAQGFLFSPPLPAE 745 Query: 341 AFV 343 F Sbjct: 746 QFA 748 >UniRef50_Q47U99 Sensory box/GGDEF/EAL domain protein n=1 Tax=Colwellia psychrerythraea 34H RepID=Q47U99_COLP3 Length = 1534 Score = 79.0 bits (193), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 60/241 (24%), Positives = 123/241 (51%), Gaps = 21/241 (8%) Query: 118 YYQPIYNAKNGNIAGCDVTIALKNSDG----SAFALDSDRINYNPNDNKVSYLFGHINKL 173 +YQPI NA G G ++ + + S G S F S+ +N +++ + ++ Sbjct: 1292 HYQPIINAYTGKAVGVEMLMRWQTSTGLVPPSDFIPLSEELNLIITMTEMA-----LERV 1346 Query: 174 FSPIK--NNLPHGFFITININPEDILTCDIERECLHFIKVFGTERIRL---VLQFSTKEE 228 +K + + F+++IN++ + + DI + FI R +L +L+ E Sbjct: 1347 CKDLKEWHTIRPEFYVSINLSVQHFVEADI----VSFISEL-LARYQLPAAILRVEVTES 1401 Query: 229 LYIIRRYQ--SSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNS 286 I++ +++R++ + + L+L+DFG G++ LS+L+ +P + + ++ I N Sbjct: 1402 SLILQPENAITTMRKLSSLGLTLALDDFGTGFSSLSYLKKLPLDIIKIDRSFVAGIGINE 1461 Query: 287 LTDIIATTIIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKL 346 + I T + L+K+L++ IA+G+ET +Q Y++ + YL+G S P A+ ++ L Sbjct: 1462 ADEAIVDTTLVLAKRLNMHCIAEGVETVEQFNYLVAKQCHYLQGYLYSKPSSAEKIMKNL 1521 Query: 347 L 347 L Sbjct: 1522 L 1522 >UniRef50_C6NZZ7 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=2 Tax=Bacteria RepID=C6NZZ7_9PROT Length = 1152 Score = 79.0 bits (193), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 44/176 (25%), Positives = 82/176 (46%) Query: 178 KNNLPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQS 237 KN + +N++ D + ++ RL L+ + L I + Sbjct: 971 KNASTRELVLAVNVSARSFFQDDFVTQIQTVLQRHAINPKRLKLEITESMMLNSIEQTIE 1030 Query: 238 SLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIID 297 + ++ V +++DFG GY+ L +L+ +P + + ++ DI ++S I TTI+ Sbjct: 1031 KMNALKKLGVQFAMDDFGTGYSSLQYLKRLPLDQLKIDQSFVRDIATDSSDKAIVTTIVA 1090 Query: 298 LSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLLASLKQV 353 ++ L++DVIA+G+ET++Q +IE G +G P P F L L+Q Sbjct: 1091 MAHSLNLDVIAEGVETEQQRQLLIESGCSQYQGYLFGKPAPIRQFEESLKPGLRQA 1146 >UniRef50_C6P1A0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P1A0_9PROT Length = 1011 Score = 79.0 bits (193), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 44/173 (25%), Positives = 92/173 (53%), Gaps = 7/173 (4%) Query: 178 KNNLPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQS 237 K+ L ++IN++ + D + + +G + L L+ + E ++ + Sbjct: 840 KDPLTRNLVLSINVSAKQFHQPDFVDQVQAAVDHYGIDPALLKLELT---ESILLENVDT 896 Query: 238 SLRR---IRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATT 294 +++R ++ V SL+DFG GY+ L +L+ +P + + ++ +I S+S I +T Sbjct: 897 TIKRMSALKKTGVGFSLDDFGTGYSSLQYLKRLPLDQLKIDQSFMQEITSDSSDMAIVST 956 Query: 295 IIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLL 347 II +++ + + VIA+G+ET++Q ++ +G + +G S P+P + F KLL Sbjct: 957 IIAMAQSMQMGVIAEGVETEEQRQLLLRKGCNHFQGYLFSKPVPVEQF-EKLL 1008 >UniRef50_Q5NYX4 Complex sensory protein with histidine kinase domain n=2 Tax=Rhodocyclaceae RepID=Q5NYX4_AZOSE Length = 1246 Score = 79.0 bits (193), Expect = 3e-13, Method: Composition-based stats. Identities = 42/156 (26%), Positives = 81/156 (51%) Query: 187 ITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSLRRIRNNN 246 + +N++P D+ + + + E L+L+ + + R +++++ Sbjct: 942 VAVNVSPLQFFRDDLVADVAALLSRYRLEPASLMLEITESAIMGNPARAIVMMQQLKAIG 1001 Query: 247 VYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSKQLHIDV 306 V L+++DFG GY+ LS L+ P Y+ + + DI +N+ IA +II L+ L++ V Sbjct: 1002 VKLAIDDFGTGYSSLSALKRFPIDYLKIDRAFVTDITTNASDAAIAVSIISLAHSLNLRV 1061 Query: 307 IADGIETKKQAGYMIERGVKYLKGIALSSPLPADAF 342 IA+G+ET+ Q Y+ RG ++G S P+ +A Sbjct: 1062 IAEGVETEGQVLYLRGRGCDEMQGYHFSPPVAPEAL 1097 >UniRef50_Q47AF7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q47AF7_DECAR Length = 1094 Score = 79.0 bits (193), Expect = 3e-13, Method: Composition-based stats. Identities = 45/164 (27%), Positives = 85/164 (51%), Gaps = 8/164 (4%) Query: 187 ITININPEDILTCDIERECLHFIKVFGTERIRLVLQFST----KEELYIIRRYQSSLRRI 242 I++N++P + E L ++K G + + L+ + E L++ R L Sbjct: 924 ISVNMSPRQFVKDGSEAGWLDYLKSIGLDPRYIGLEITEGLLLDERLHVAER----LAAF 979 Query: 243 RNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSKQL 302 R + + +SL+DFG GY+ +++L+ P Y+ + +T D+ S+S IA +I ++ QL Sbjct: 980 RASGIQISLDDFGTGYSAMAYLKKYPIDYLKIDRTFVRDLVSDSGDRAIAQAMIFMASQL 1039 Query: 303 HIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKL 346 + +A+G+ET +Q + G ++G + PLP D F+ L Sbjct: 1040 GLKTVAEGVETAEQRDLLQSFGCDLIQGYYYARPLPRDEFMAYL 1083 >UniRef50_C7RTE0 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RTE0_9PROT Length = 714 Score = 79.0 bits (193), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 44/159 (27%), Positives = 79/159 (49%), Gaps = 4/159 (2%) Query: 187 ITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSLR--RIRN 244 ++IN+ L + +C I G ++VL+ + E L ++ ++ +R +R Sbjct: 542 VSINLASPSFLEEQVAEKCSAIIAQEGIAPEQVVLELT--ESLLVVDAERTIVRLNSLRE 599 Query: 245 NNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSKQLHI 304 LSL+DFG G++ LS+L+ P + + + D+ IA +II+L Q + Sbjct: 600 KGFALSLDDFGTGFSSLSYLKRFPLDELKIDRAFVTDVTRGGKDAAIALSIIELGHQFGM 659 Query: 305 DVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFV 343 V+A+G+ET+ QA +++ +G S PLP D F Sbjct: 660 RVVAEGVETRAQADFLLANRCPIQQGFLFSPPLPPDRFA 698 >UniRef50_A5EP96 Diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(S) n=3 Tax=Bradyrhizobium RepID=A5EP96_BRASB Length = 913 Score = 79.0 bits (193), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 54/239 (22%), Positives = 106/239 (44%), Gaps = 4/239 (1%) Query: 114 HYNIYYQPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRI---NYNPNDNKVSYLFGHI 170 + ++YQP + +G + G + I ++ D I N +P V+ Sbjct: 666 EFELFYQPQVDLSSGRVIGAEALIRWRHPT-RGLVPPGDFIPVVNTSPLSEAVATWVMAT 724 Query: 171 NKLFSPIKNNLPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELY 230 + H + IN++P + D+ + V G + L+ + L+ Sbjct: 725 ACRQAREWQLAGHEIRVGINLSPSQFQSGDLAAFVSKLLTVTGVSPGLIELEVTEDILLH 784 Query: 231 IIRRYQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDI 290 + R++ V L +DFG GYA LS+L+ P + + ++ D+ + + Sbjct: 785 DEPGVLQTFNRLQALGVSLVFDDFGTGYASLSYLKKFPLDGLKIDRSFVRDVLTQADDAA 844 Query: 291 IATTIIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLLAS 349 I + + LS+QL++ VIA+GIE + A +++ G ++ +G P+PA F R+ L++ Sbjct: 845 IVGSTVSLSRQLNLSVIAEGIENQATADFLLALGCEHGQGYHFGKPMPAADFERRFLSA 903 >UniRef50_Q2BRK3 Putative uncharacterized protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BRK3_9GAMM Length = 992 Score = 78.6 bits (192), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 45/163 (27%), Positives = 90/163 (55%), Gaps = 4/163 (2%) Query: 186 FITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSLRRIRNN 245 FI++N++P D+ R+ ++ G L ++ + + ++L+ I + Sbjct: 830 FISVNVSPRQFKGNDLLRDLTSALESSGLHPHHLNIEVTEGLLIEASPELNNTLQLITDM 889 Query: 246 NVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSKQLHID 305 + LS++DFG GY+ L++L+ PF+ + + ++ ++ NS + I+ T I ++ QL + Sbjct: 890 GINLSMDDFGTGYSSLNYLKKFPFNNLKIDRSFIKELPDNSDSAILVTATIAMAHQLGLS 949 Query: 306 VIADGIETKKQAGYMIERGVK--YLKGIALSSPLPADAFVRKL 346 V A+GIET +Q Y+ RG++ L+G + P+PA+ F +L Sbjct: 950 VTAEGIETAEQYNYL--RGLRCDRLQGFYMGKPVPANEFSFEL 990 >UniRef50_Q3IDF2 Putative uncharacterized protein n=1 Tax=Pseudoalteromonas haloplanktis TAC125 RepID=Q3IDF2_PSEHT Length = 427 Score = 78.6 bits (192), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 55/239 (23%), Positives = 118/239 (49%), Gaps = 22/239 (9%) Query: 118 YYQPIYNAKNGNIAGCDVTIAL-KNSDGS--------AFALDSDRINYNPNDNKVSY-LF 167 +YQP I +V + N+DGS + A D IN ++++ LF Sbjct: 178 FYQPKICINTSKIKSAEVLARIVSNTDGSIILPARFISLAEQHDLIN------EITFALF 231 Query: 168 GHINKLFSPIKNNLPHGFFITININPEDI--LTCDIERECLHFIKVFGTERIRLVLQFST 225 F IK L + N++P + L+C + + + I +++ + Sbjct: 232 EKATSDFENIKEQLGQNLKLAFNLSPMQLNDLSCPNKLLLILKLNQLKPSDI--IIEITE 289 Query: 226 KEELYIIRRYQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESN 285 + L + + ++ L R+R + LSL+DFG+G+ +S L+N+PF+ + + +T+ +IE++ Sbjct: 290 QHALSSLSQLET-LNRLRMHGFGLSLDDFGVGFTNMSQLKNLPFTEIKIDRTLISNIETD 348 Query: 286 SLTDIIATTIIDLSKQLHIDVIADGIETKKQAGYMIERGVKY-LKGIALSSPLPADAFV 343 + ++ +++ID++ Q H++++A+G+E ++ Y+ + ++G S P F+ Sbjct: 349 QFSQVVVSSLIDITNQEHLELVAEGVERPEELAYLRHYKTRLAIQGFLFSRPKSKSEFI 407 >UniRef50_Q2SFK1 FOG: EAL domain n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SFK1_HAHCH Length = 1092 Score = 78.6 bits (192), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 68/284 (23%), Positives = 118/284 (41%), Gaps = 40/284 (14%) Query: 83 FKAYLQPKNIIC---DNFNSSVLPVVS-----SKGESMAHYNIYYQPIYNAKNGNIAGCD 134 +KA + +N IC N S+ V +G +YYQP + G G + Sbjct: 660 YKAKERGRNRICSYTQEMNESIQKRVQMEQDLRRGIENGELELYYQPQLDPHGGGAVGLE 719 Query: 135 VTIALKNSDGSAFALDSDRINYNPN-----DNKVSYLFGHINKLFSPIKNNLPHGFFITI 189 + + D L+ I D V K++ K + +++ Sbjct: 720 ALVRWRKGDRMVPPLEFIPIAEETGLITEVDAWVLRAACLQLKMWRDQKQQM---VPVSV 776 Query: 190 NINPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKE---------ELYIIRRYQSSLR 240 N++P F + E +R VLQ S E E ++ + +LR Sbjct: 777 NLSPR------------QFQDAYCVELVRKVLQESNIEPGCLKIEVTESMVMHNAEEALR 824 Query: 241 ---RIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIID 297 +++ V LS++DFG GY+ LS+L+ PF + + K+ ++ ++ I II Sbjct: 825 TMTQLKAMGVQLSMDDFGTGYSSLSYLKMFPFDQLKIDKSFVRNVTNDPQEAAIIRAIIG 884 Query: 298 LSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADA 341 L K L I ++A+G+ET +Q +++ G ++G S PLP A Sbjct: 885 LGKTLGIKIVAEGVETVEQYSFLVRAGCDLIQGYFYSPPLPVAA 928 >UniRef50_A6Q176 Signal transduction response regulator n=1 Tax=Nitratiruptor sp. SB155-2 RepID=A6Q176_NITSB Length = 737 Score = 78.6 bits (192), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 54/235 (22%), Positives = 111/235 (47%), Gaps = 8/235 (3%) Query: 111 SMAHYNIYYQPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPND---NKVSYLF 167 S Y +YYQPI + +NG + G + + NS + I+ N+V L Sbjct: 490 SKKEYLLYYQPIIDIRNGRVWGAEALLRW-NSKKRGLVPPNVFISILEESALINEVGELI 548 Query: 168 GHINKLFSPIKNNLPHGFFI--TININPEDILTCDIERECLHFIKVFGTERIRLVLQFST 225 + + K H I ++N++ +L ++ +E + ++ + +L+++ + Sbjct: 549 --LEDICKTAKEFEEHDLRIAFSMNLSVTQLLNRNMAQEIIMAVEHHEVKPQQLIVEITE 606 Query: 226 KEELYIIRRYQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESN 285 + + R +S L + N + + ++DFG GY+ LS+L+++P + + + + S+ Sbjct: 607 SVLMENVDRLKSQLEELHENGIQIEIDDFGTGYSSLSYLKHLPITNLKIDMEFIRSMPSD 666 Query: 286 SLTDIIATTIIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPAD 340 I II ++K L IA+G+E K+Q + GV Y++G + P+P + Sbjct: 667 EEDRAIVGAIISMAKALQKGTIAEGVEQKEQLDILTNLGVDYIQGYYFAKPMPKE 721 >UniRef50_B7ASA5 Putative uncharacterized protein n=1 Tax=Bacteroides pectinophilus ATCC 43243 RepID=B7ASA5_9BACE Length = 566 Score = 78.6 bits (192), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 58/236 (24%), Positives = 104/236 (44%), Gaps = 7/236 (2%) Query: 116 NIYYQPIYNAKNGNIAGCDVTIA--LKNSDGSAFALDSDRINYNPNDNKVSYLFGH-INK 172 ++YQPIY+ I + I + N D + L + N + KV Y H +NK Sbjct: 330 QVFYQPIYDPYTEKIVEAEALIRWIMPNGDVISPGLFLPTLEKNGHIAKVDYFVSHTVNK 389 Query: 173 LFSPIKNNLPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYII 232 N+ H +T+N++ D + ++ +R F E Y+ Sbjct: 390 FIEDRLNSGRHVVPVTVNLSRMDFYDAKTPSAIID--EIIAKSSLRPYRMFEITESAYMS 447 Query: 233 --RRYQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDI 290 R + + R+R+ V L L+DFG G++ + N F + L + N + Sbjct: 448 LNDRAEEMIGRMRSLGVGLLLDDFGSGFSSYGTIANYDFDIIKLDMQFIRMLGKNKKSGK 507 Query: 291 IATTIIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKL 346 I +II ++ +L + ++A+G ET++Q ++ E G Y++G S P+P F + L Sbjct: 508 IIRSIISMAHELGVKIVAEGAETREQVEFLKECGSDYIQGYYFSRPIPQSEFEKLL 563 >UniRef50_Q1YJA6 Putative diguanylate cyclase n=1 Tax=Aurantimonas manganoxydans SI85-9A1 RepID=Q1YJA6_MOBAS Length = 834 Score = 78.6 bits (192), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 49/181 (27%), Positives = 87/181 (48%), Gaps = 29/181 (16%) Query: 182 PHGFFITININP--------EDILTCDIERECLHFIKVFGTERIR------LVLQFSTKE 227 P +++N++P DI+ + R L +ER+R L+LQ S Sbjct: 633 PSELAVSVNLSPVQFRDPGLADIVEAALARAGL------ASERLRVEVTESLLLQHSAT- 685 Query: 228 ELYIIRRYQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSL 287 ++L R R+ + +S++DFG GY+ L +L PF + + ++ +++ Sbjct: 686 -------VLATLERFRDQGIGISMDDFGTGYSSLGYLSRFPFDKIKIDQSFVRNLDDREN 738 Query: 288 TDIIATTIIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLL 347 II +I LS+ + + VIA+G+ET Q ++ G + ++G S P PAD R LL Sbjct: 739 MAII-RAVIGLSRAMDLSVIAEGVETAAQRDILLREGCREMQGYFFSRPKPADELARMLL 797 Query: 348 A 348 + Sbjct: 798 S 798 >UniRef50_B3PC21 Sensory box protein n=1 Tax=Cellvibrio japonicus Ueda107 RepID=B3PC21_CELJU Length = 1306 Score = 78.6 bits (192), Expect = 3e-13, Method: Composition-based stats. Identities = 46/178 (25%), Positives = 89/178 (50%), Gaps = 19/178 (10%) Query: 167 FGHINKLF--SPIKNNLPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFS 224 FGH+ SPI+ N F+ ED+++C ++ + L L+ + Sbjct: 1129 FGHLTLAVNVSPIQFN--QSSFV------EDVISCVLD---------YDVNPNHLKLELT 1171 Query: 225 TKEELYIIRRYQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIES 284 L + ++R++ + +++DFG+GY+ LS+L+ +P + + +T DI Sbjct: 1172 ESSLLKNVEHSIEKMQRLQEFGISFAMDDFGIGYSSLSYLKKLPLDQLKIDRTFVRDITI 1231 Query: 285 NSLTDIIATTIIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAF 342 + II TII ++ ++++VIA+G+ET+ Q ++ + G +G P+P DAF Sbjct: 1232 DPNDAIIVRTIIAMAANMNLNVIAEGVETELQKQFLEQNGCLLFQGYYFGKPMPLDAF 1289 >UniRef50_B6BNA1 Diguanylate cyclase/phosphodiesterase n=1 Tax=Campylobacterales bacterium GD 1 RepID=B6BNA1_9PROT Length = 650 Score = 78.2 bits (191), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 35/103 (33%), Positives = 64/103 (62%) Query: 239 LRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDL 298 L+ I + ++++DFG GY+ LS+L+ +P + + ++ DI + + I +I + Sbjct: 538 LKEISELGIKIAIDDFGTGYSSLSYLKKLPIDKLKIDQSFIRDIPGSEDDNAIVKAVIAI 597 Query: 299 SKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADA 341 SK L++DVIA+G+ETK+Q +++E G ++G S PLPA+ Sbjct: 598 SKSLNLDVIAEGVETKEQRDFVLENGCSKIQGYYYSRPLPAEG 640 >UniRef50_A3IAQ2 Sensor histidine kinase; possible sporulation kinase n=2 Tax=Bacillaceae RepID=A3IAQ2_9BACI Length = 934 Score = 78.2 bits (191), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 45/131 (34%), Positives = 78/131 (59%), Gaps = 11/131 (8%) Query: 221 LQFSTKEELYIIRRYQSSLRRIRNNN---VYLSLNDFGMGYAELSHLQNIPFSYVNLHKT 277 LQ E L I++ + +L+ + N V L+++DFG GY+ L +L+N+P S + + K+ Sbjct: 806 LQLELTENL-IVKNTEVTLKTMTQLNGLGVNLAIDDFGTGYSSLGYLKNLPISTLKIDKS 864 Query: 278 MFHDIESNSLTD---IIATTIIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALS 334 ++ LTD I TII L++ L ++VIA+G+ETK+QA Y++E+ ++G S Sbjct: 865 FVQEM----LTDDAAAITNTIITLAQNLKLEVIAEGVETKEQADYLLEQNCHLMQGYFFS 920 Query: 335 SPLPADAFVRK 345 P+ A ++K Sbjct: 921 KPMKAGEIMKK 931 >UniRef50_B9M1S6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Geobacter RepID=B9M1S6_GEOSF Length = 749 Score = 78.2 bits (191), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 53/244 (21%), Positives = 111/244 (45%), Gaps = 10/244 (4%) Query: 114 HYNIYYQPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGH---- 169 + + +QPI NA++G + G + L+ SD + D ++ G Sbjct: 488 EFFLEFQPIVNARDGRLVGAEAL--LRWSDPEKGLIMPDMFIQVAEESGFIVPLGEWVLR 545 Query: 170 --INKLFSPIKNNLPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKE 227 K+ + LP F I++N++ + I+ G + L L+ + Sbjct: 546 TACRKMKDWREAGLPP-FRISVNVSGRQFCQANFTDTVCSIIRETGMDPSFLALEMTETS 604 Query: 228 ELYIIRRYQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSL 287 + + +L +++ ++ + ++DFG GY+ L +LQ P + + ++ D+ S++ Sbjct: 605 LMVDVEATAKALMQLKELDISIVIDDFGAGYSSLGYLQKFPIDRIKIDRSFIRDLSSHAN 664 Query: 288 TDIIATTIIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLL 347 I II ++ +L + V+A+G+ET +Q ++ E+G ++G PL + F + LL Sbjct: 665 DKAIVEAIIAMAARLKLQVVAEGVETSEQLDFLKEQGCHEIQGFYFHRPLSEELF-KTLL 723 Query: 348 ASLK 351 +K Sbjct: 724 WEIK 727 >UniRef50_A6T0F0 Sensory box/GGDEF family protein n=2 Tax=Oxalobacteraceae RepID=A6T0F0_JANMA Length = 699 Score = 78.2 bits (191), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 44/157 (28%), Positives = 82/157 (52%) Query: 187 ITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSLRRIRNNN 246 I++N++P + DI + G E L L+ + + + + L ++R+ Sbjct: 538 ISVNLSPRQLARGDIVEVVERILTETGLEAQHLELEITESVMTTDVEKSFALLTQLRSLG 597 Query: 247 VYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSKQLHIDV 306 V +SL+DFG GY+ LS+L+ P + + ++ DI ++ + I II L + L++ V Sbjct: 598 VKISLDDFGTGYSSLSYLKRFPVDTLKIDQSFVRDIATDQDSAAIVKAIISLGRNLNLTV 657 Query: 307 IADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFV 343 +A+GIET+ Q +++ G +G +S P+P FV Sbjct: 658 LAEGIETEDQFQFLLANGCDEGQGYLMSKPVPNKNFV 694 >UniRef50_Q3MFD3 Diguanylate cyclase/phosphodiesterase n=4 Tax=Nostocaceae RepID=Q3MFD3_ANAVT Length = 576 Score = 78.2 bits (191), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 36/109 (33%), Positives = 67/109 (61%) Query: 232 IRRYQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDII 291 I+R + L+++R V+L+L+DFG GY+ L++L+ P + + + ++ D+ SN + + Sbjct: 443 IQRSVTILKQLRELGVWLALDDFGTGYSSLNYLKRFPVNMLKIDRSFVQDVCSNPDSAAV 502 Query: 292 ATTIIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPAD 340 II L+K L + + A+GIET++Q Y+ +RG + +G P PA+ Sbjct: 503 TNAIIALAKSLQLKITAEGIETQQQLSYLQKRGCQEGQGYYFGIPAPAN 551 >UniRef50_B8CUT1 EAL domain protein n=1 Tax=Shewanella piezotolerans WP3 RepID=B8CUT1_SHEPW Length = 515 Score = 78.2 bits (191), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 57/239 (23%), Positives = 106/239 (44%), Gaps = 15/239 (6%) Query: 118 YYQPIYNAKNGNIAGCDVTIALKNSDGSAFALDS--DRINYNPNDNKVSYLFGHINKLFS 175 +YQPI +A G I G + + +G + D + N ++ ++ Sbjct: 281 FYQPIMDAATGRIVGAEALVRWLRPNGEVISPARFIDELERTALINPLTI------QMLE 334 Query: 176 PIKNNLPH------GFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEEL 229 I +L GF ++N+ PE + D R + + G ++ ++ + + L Sbjct: 335 QIPEDLKSIFASDGGFRCSLNLVPEQVEQEDFCRH-VELLAASGFPTQQIAVEITERLPL 393 Query: 230 YIIRRYQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTD 289 + L R++ V + L+D G GY S+LQ + + + K + + Sbjct: 394 RNLEVANQHLERLKALGVMIELDDAGTGYGGASYLQELNIDILKIDKLFVDTLVLSPDNT 453 Query: 290 IIATTIIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLLA 348 + I ++K L ++VIA+G+E +KQ+ ++ RGV +G S PLPA+ FVR L+ Sbjct: 454 PVLDAYIQMAKTLEMEVIAEGVEKQKQSLALLARGVHLHQGYYFSKPLPAEEFVRFWLS 512 >UniRef50_A4BDU9 EAL domain protein n=1 Tax=Reinekea blandensis MED297 RepID=A4BDU9_9GAMM Length = 725 Score = 78.2 bits (191), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 61/275 (22%), Positives = 126/275 (45%), Gaps = 14/275 (5%) Query: 84 KAYLQPKNIICDNFNSSVLPVVSSKGESMAHYN---------IYYQPIYNAKNGNIAGCD 134 K Y+Q K I ++ S++ + + M + + +QP + GC+ Sbjct: 446 KFYMQEKQIFVMEYSPSIVQIADVRIRMMQQLHADIEAKRLSVVFQPKVELETRKPVGCE 505 Query: 135 VTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINKLF---SPIKNNLPHGFFITINI 191 +A + + DS IN N + L I + + + N L H +++N+ Sbjct: 506 -ALARWSFEEKPVPPDS-FINIAQNAGFIDQLDLCIAEQVLEKTHLLNELGHKITVSLNM 563 Query: 192 NPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSLRRIRNNNVYLSL 251 +P ++ E + L + E RL ++ + +E + L +++N + ++L Sbjct: 564 SPSEVGDRKFESQFLDKVTQTNLEIDRLEVEITEEEPVRDYEYLSEFLEKLQNAGLRIAL 623 Query: 252 NDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSKQLHIDVIADGI 311 +DFG GY+ L H+ + + + + +D N + + + L+++L +++IA+GI Sbjct: 624 DDFGKGYSSLMHITKLTVDVIKVDREFVNDFLHNRSSAMAIELSVALAERLGLELIAEGI 683 Query: 312 ETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKL 346 ET++Q + E GV++ +G + P+P D FV L Sbjct: 684 ETEEQETKLKELGVRFGQGYFYAKPMPWDDFVNWL 718 >UniRef50_B9L5S2 Sensory box/ggdef family protein n=1 Tax=Nautilia profundicola AmH RepID=B9L5S2_NAUPA Length = 652 Score = 78.2 bits (191), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 59/241 (24%), Positives = 119/241 (49%), Gaps = 15/241 (6%) Query: 114 HYNIYYQPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINKL 173 + ++YQP ++ KN NI GC+ I DG + +++ P K ++ N + Sbjct: 419 EFKLFYQPKFD-KNKNIIGCEALIRWI-RDGQIIS----PLDFIPIAEKSGFIIQLGNWI 472 Query: 174 FSPI----KNNLPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEEL 229 + + L G + I+ N + + E+ ++F + R +++ E + Sbjct: 473 MEEVAKVQQEWLNKGIKLEISFNVSAVQFRN-EKFVNDLKEIFKKSQ-RNLIEMEITESV 530 Query: 230 YIIRRYQSS--LRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSL 287 +I + ++ + IR+ + +SL+DFG GY+ LS L+ + + K+ +I S Sbjct: 531 FIQEKDKAKTIINEIRDYGIRISLDDFGTGYSSLSFLREFEIDVLKIDKSFVDEIYSEE- 589 Query: 288 TDIIATTIIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLL 347 + TI+++++ LH++ IA+G+ET++Q + G KY +G S PLP + F + +L Sbjct: 590 GKVYVQTILNMAENLHLETIAEGVETEEQFNILKSLGCKYFQGYLFSKPLPKEEFEKFVL 649 Query: 348 A 348 + Sbjct: 650 S 650 >UniRef50_C8QYF1 Diguanylate cyclase/phosphodiesterase n=1 Tax=Desulfurivibrio alkaliphilus AHT2 RepID=C8QYF1_9DELT Length = 711 Score = 78.2 bits (191), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 64/275 (23%), Positives = 128/275 (46%), Gaps = 28/275 (10%) Query: 75 LWRDVFLRFKAYLQPKNIICDNFNSSVLPVVSSKGESMAHYNI--YYQPIYNAKNGNIAG 132 L R FL ++ L + I DN L V+ + ++++ ++ YYQPI + + G I Sbjct: 451 LRRGSFLIYQEELNLQERIADN-----LQVLENARRALSNDDVLVYYQPIVDNRTGKIVK 505 Query: 133 CDVTIALKNSDGSAFA----LDSDRINYNPNDNKVSYLFGH-----INKLFSPIKNNLPH 183 + + L+N DG + LD K S L+ ++K F+ + + + Sbjct: 506 FESLVRLRNPDGQVLSPVMFLDV---------VKESSLYPEFTRRMVDKTFADLAD-CRY 555 Query: 184 GFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSLRRIR 243 GF ++N++ DI+ +++ + IK RL + E + I QS + R++ Sbjct: 556 GF--SLNLSIADIVEQEVQDFIMAKIKAHPEIARRLTFEILESEGVENIALVQSFIERVK 613 Query: 244 NNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSKQLH 303 ++++DFG GY+ +H+ + + T+ +I + ++ TI+D +QL Sbjct: 614 AAGCQIAIDDFGSGYSNFAHILQFKVDSIKIDATLIRNIHQDQQAQVLVRTIVDFCRQLG 673 Query: 304 IDVIADGIETKKQAGYMIERGVKYLKGIALSSPLP 338 I+ +A+ + +++ + E G+ Y +G L P P Sbjct: 674 INTVAEFVHSEEVLQVVKELGIDYSQGYFLGKPAP 708 >UniRef50_C0N3Y7 Putative uncharacterized protein n=1 Tax=Methylophaga thiooxidans DMS010 RepID=C0N3Y7_9GAMM Length = 1123 Score = 78.2 bits (191), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 39/125 (31%), Positives = 73/125 (58%), Gaps = 4/125 (3%) Query: 228 ELYIIRRYQSS---LRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIES 284 E ++RR+ S L+++R V ++++DFG GY+ LS+L+ + Y+ + ++ D+E+ Sbjct: 987 ESVLMRRHAESGHLLKKLRQAGVQIAVDDFGTGYSSLSYLKEMDIDYLKIDRSFIRDLEA 1046 Query: 285 NSLTDIIATTIIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVR 344 + I I +++ L I+VIA+G+ET Q + + G +L+G + P+P D F Sbjct: 1047 DDNDRAIIEAITGMARHLGIEVIAEGVETLSQKEILEKIGCHWLQGYFFAKPMPVDVF-E 1105 Query: 345 KLLAS 349 + LAS Sbjct: 1106 EFLAS 1110 >UniRef50_A5KX08 Sensory box/GGDEF family protein n=1 Tax=Vibrionales bacterium SWAT-3 RepID=A5KX08_9GAMM Length = 844 Score = 78.2 bits (191), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 52/242 (21%), Positives = 115/242 (47%), Gaps = 19/242 (7%) Query: 113 AHYNIYYQPIYNAKNGNIAGCDVTIALKNSD-GSAFALDSDRINYNPNDNKVSYL--FGH 169 ++++YQP ++ + + G + NS G LD + P +V + G Sbjct: 595 GEFSVFYQPQVDSHSKQLKGVEALCRWNNSLLGFVSPLD-----FIPAAERVGKIHEIGE 649 Query: 170 --INKLFSPIKNNLPHG---FFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFS 224 + K N +P+G +++N++P+ + E + + ++ G R+ L+ + Sbjct: 650 FVLRKACEDTLNLMPNGPGAVCVSVNVSPKQVFELGFEEKVICLVEQVGIAPQRVTLELT 709 Query: 225 TK---EELYIIRRYQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHD 281 ++L+I+ + LRR+R+ +SL+DFG G++ L++L +P + + + ++ Sbjct: 710 ENILIKDLHIV---EPILRRLRDYGFGISLDDFGTGFSSLNYLNTLPITEIKIDRSFIGK 766 Query: 282 IESNSLTDIIATTIIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADA 341 + S+ ++ + IID+ + V+A+G+ET +Q + + L+G PL A Sbjct: 767 LNSSQHSETLVKAIIDIGASCQMKVVAEGVETPEQMAKLQQYHCDLLQGYYFDKPLTAKG 826 Query: 342 FV 343 + Sbjct: 827 LL 828 >UniRef50_A4EE01 Putative uncharacterized protein n=1 Tax=Roseobacter sp. CCS2 RepID=A4EE01_9RHOB Length = 654 Score = 78.2 bits (191), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 58/232 (25%), Positives = 108/232 (46%), Gaps = 18/232 (7%) Query: 118 YYQPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSY---LFGHINK-- 172 YYQP + + G I G + ++ + ++ P N+++ H K Sbjct: 405 YYQPKISIETGQIVGFEALSRWEHPTRGTLSPS----HFLPMINELALQGTFMAHTAKHV 460 Query: 173 ---LFSPIKNNLPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEEL 229 L +++ L G ++IN++ + T +E I + +R L F E++ Sbjct: 461 MKDLAILVEDGLDPGQ-VSINMSEVAMATLMGRKELFAIIDRY--PELRPHLTFEITEDI 517 Query: 230 YIIRR---YQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNS 286 +I R + S+R R V +SL+DFG GYA L HL+ + F + L D+ + Sbjct: 518 FIARASDIIRRSIRLFRQAGVRISLDDFGTGYASLQHLKELEFDELKLDTGFVRDLGIDP 577 Query: 287 LTDIIATTIIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLP 338 I+ ++ ++K L +++IA+G+ET +Q + + G KY++G + LP Sbjct: 578 AAKILIEGLVTITKGLQVELIAEGVETAQQRDMLRDMGCKYVQGFFYGAALP 629 >UniRef50_A1WHK3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Verminephrobacter eiseniae EF01-2 RepID=A1WHK3_VEREI Length = 859 Score = 78.2 bits (191), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 40/160 (25%), Positives = 81/160 (50%) Query: 184 GFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSLRRIR 243 G I++N++ + LH +K G + RL L+ + L I + + +++ Sbjct: 685 GLSISVNVSARQFRQPGFVAQVLHQLKSHGADPRRLKLELTESLLLGDIEDTIARMAQLK 744 Query: 244 NNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSKQLH 303 + V +L+DFG GY+ LS+L+ +P + + ++ ++ ++ I TI+ L+K L Sbjct: 745 SEGVGFALDDFGTGYSSLSYLKRLPLDQIKIDQSFVREVLADPNDAAIVRTILALAKSLD 804 Query: 304 IDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFV 343 + V+A+G+ET Q ++ G + +G P+P + F Sbjct: 805 LQVVAEGVETTGQLSFLQLHGCEGFQGYLFGRPVPMEVFA 844 >UniRef50_B9LZ98 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Geobacter sp. FRC-32 RepID=B9LZ98_GEOSF Length = 912 Score = 78.2 bits (191), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 60/249 (24%), Positives = 110/249 (44%), Gaps = 21/249 (8%) Query: 114 HYNIYYQPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINKL 173 + I+YQP + K+G + G + I ++ D L R + + G Sbjct: 669 EFVIFYQPQMDLKSGRLVGMEALIRWQHPDLGL--LPPSRFIPMAEETGLILPIGEWALQ 726 Query: 174 FSPIKNN--LPHGFF---ITININPEDILTCDIERECLHFIKVF-------GTERIRLVL 221 + KN + GF + +N+ C I+ FI++ G +L L Sbjct: 727 TACAKNRAWMDAGFMPLRVAVNL-------CGIQFRQKKFIELIEAVLKKTGLAPSQLEL 779 Query: 222 QFSTKEELYIIRRYQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHD 281 + + + + L +++ V L+++DFG GY+ LS+L+N P + V + ++ D Sbjct: 780 ELTESMLMSKAEESTTVLHKLKEMGVSLAIDDFGTGYSSLSYLKNFPINRVKIDRSFIRD 839 Query: 282 IESNSLTDIIATTIIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADA 341 + +N I + II ++ L++ V A+G+E Q ++ R ++G LSSPLP Sbjct: 840 VPNNPDDTAIVSAIIAMAHNLNLKVTAEGVENHSQLEFLSTRNCNEIQGYLLSSPLPEAE 899 Query: 342 FVRKLLASL 350 F R L + Sbjct: 900 FTRFLRGGM 908 >UniRef50_A8VZA5 Signal transduction protein containing a membrane domain an EAL and a GGDEF domain-like protein n=2 Tax=cellular organisms RepID=A8VZA5_9BACI Length = 579 Score = 78.2 bits (191), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 58/243 (23%), Positives = 114/243 (46%), Gaps = 7/243 (2%) Query: 115 YNIYYQPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHI--NK 172 + ++YQP Y+ + + G + I ++ D F + DR + + GHI + Sbjct: 338 FQLHYQPQYDLAHDRVIGFEALIRWQD-DHLGF-VPPDRFIPTAEETGLIIPIGHIVLEE 395 Query: 173 LFSPIKNNLPHGF--FITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELY 230 K+ L HG + +NI+P D + G +L ++ + LY Sbjct: 396 ACRMGKSWLDHGLDLRVGVNISPVQFQHPDFIHSVRQTLAQTGLPAKQLDIEITENVLLY 455 Query: 231 IIRRYQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDI 290 ++L +++ V++S++DFG G++ LS+L+ P + + ++ D+ +N Sbjct: 456 NRDECLNTLDQLKRLGVHISIDDFGTGFSSLSYLRTFPVDVLKIDQSFVRDVSNNHNDQA 515 Query: 291 IATTIIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLLASL 350 I T+II L+ + + VIA+G+ET ++I+R ++G S P+P + + LA Sbjct: 516 IVTSIIQLAHNMGMKVIAEGVETDDSLHFLIDRECDQMQGYIYSKPIPPEQ-ISSFLAGN 574 Query: 351 KQV 353 K + Sbjct: 575 KTI 577 >UniRef50_B1QUK2 Diguanylate cyclase/phosphodiesterase n=2 Tax=Clostridium butyricum RepID=B1QUK2_CLOBU Length = 762 Score = 77.8 bits (190), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 59/259 (22%), Positives = 116/259 (44%), Gaps = 24/259 (9%) Query: 97 FNSSVLPVVSSKGESMAHYNIYYQPIYNAKNGNIAGCDVTIALKNSDG------------ 144 FNS + +G + Y+QPI + K G I G + I +G Sbjct: 505 FNSLEVESKILEGIKKGEFEAYFQPIIDLKTGIINGAEALIRWNTCEGVISPNKFIPLAK 564 Query: 145 -SAFALDSDRINYNPNDNKVSYLFGHINKLFSPIKNNLPHGFFITININPEDILTCDIER 203 + + ++ D++ + KL + +N F I+IN + + + Sbjct: 565 SNGYIIEIDKM-----------VIEQSCKLIRELIDNGIEDFQISINTSFKLLSQKRFLS 613 Query: 204 ECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSLRRIRNNNVYLSLNDFGMGYAELSH 263 + I+ + + L+ + E + + LRRIR + +S++DFG GY+ ++ Sbjct: 614 NLMEVIRRYNIGVKNIKLEITEDETIEDLEYMTDLLRRIRECGIQVSIDDFGTGYSSFNY 673 Query: 264 LQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSKQLHIDVIADGIETKKQAGYMIER 323 ++ +P + + K++ D+E + T+ I TII+L+ L++ V +G+ETK+Q + + Sbjct: 674 IKTLPLDVLKIDKSLLRDMEKDERTEHIIKTIINLAHILNLSVTCEGVETKEQFQLLEKL 733 Query: 324 GVKYLKGIALSSPLPADAF 342 ++G LS PL + F Sbjct: 734 NCDNIQGYYLSRPLKINDF 752 >UniRef50_B8G486 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Chloroflexus RepID=B8G486_CHLAD Length = 699 Score = 77.8 bits (190), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 50/237 (21%), Positives = 112/237 (47%), Gaps = 17/237 (7%) Query: 115 YNIYYQPIYNAKNGNIAGCDVTIALKNSD-----GSAF------ALDSDRINYNPNDNKV 163 + +YYQPI + +G + G + + ++ +AF A +D I + + Sbjct: 455 FCVYYQPIIHLPSGRLVGFEALVRWRHPTRGILLPAAFLHVAEEAGLNDSIGWQVLEQVC 514 Query: 164 SYLFGHINKLFSPIKNNLPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQF 223 L + + +P L +++N++ ++ ++ + + + L L+ Sbjct: 515 QQLV--VWRRLNPRAAALS----VSVNLSARQVMQPNLYDRLMQLLAQYQVPPTALKLEL 568 Query: 224 STKEELYIIRRYQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIE 283 + + + L R+R + ++++DFG+GY+ LS+L +P + + + +E Sbjct: 569 TESTFMEYSHDVAALLNRLREQGIQIAIDDFGVGYSSLSYLVQLPIDQIKIDRNFIVQLE 628 Query: 284 SNSLTDIIATTIIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPAD 340 S + I TI++L+ L+++V+A+G+ET+ Q ++ G +Y +G + PL AD Sbjct: 629 SKQHSQAIVNTIVNLAHNLNLEVVAEGVETQGQLDWIRAVGCQYGQGYLIGLPLTAD 685 >UniRef50_A5V6G6 Diguanylate cyclase/phosphodiesterase n=1 Tax=Sphingomonas wittichii RW1 RepID=A5V6G6_SPHWW Length = 711 Score = 77.8 bits (190), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 38/151 (25%), Positives = 79/151 (52%) Query: 187 ITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSLRRIRNNN 246 +++N+ DI + + L + G R RL ++ + + + L ++R Sbjct: 543 LSVNVTAADIAQPNFVDDFLGRVDKAGFPRDRLTVEVTESGLIADLAGAAGLLSQLRGAG 602 Query: 247 VYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSKQLHIDV 306 + ++++DFG GY+ L++L+ +P Y+ + KT+ DI ++ I+ +I++++ L + V Sbjct: 603 LRVAIDDFGTGYSSLAYLKALPLDYLKIDKTLAEDITGSTRDRIVVRGVIEMARSLGLAV 662 Query: 307 IADGIETKKQAGYMIERGVKYLKGIALSSPL 337 I +G+ETK Q + G Y +G S P+ Sbjct: 663 ITEGVETKAQLSLLAREGCNYYQGYLCSPPI 693 >UniRef50_UPI00016C0A24 putative signaling protein n=1 Tax=Epulopiscium sp. 'N.t. morphotype B' RepID=UPI00016C0A24 Length = 546 Score = 77.8 bits (190), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 53/234 (22%), Positives = 107/234 (45%), Gaps = 11/234 (4%) Query: 115 YNIYYQPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINKLF 174 + +YYQP Y+ I G + + + I + P K Y+ ++ Sbjct: 298 FEVYYQPKYDPTKRLINGAEALVRWNFKKKQLIS----PIEFIPEFEKNGYIIELDKYVW 353 Query: 175 SPI-----KNNLPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEEL 229 K+NL +++N++ + + + +K + + RL L+F+ Sbjct: 354 RKACEYINKHNL--DILVSVNVSMRHLEDPEFKAYITKLVKEYDIDPGRLCLEFTETAHH 411 Query: 230 YIIRRYQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTD 289 I+ +L +++ + LSL+DFG GY+ L+ L++IP + + K++ + + N Sbjct: 412 EDIKYIYETLIDLQDKGLKLSLDDFGAGYSSLTLLKDIPVHEIKIDKSLVNSLAENEKAS 471 Query: 290 IIATTIIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFV 343 I TI +S +L++ + +G+ET +Q + + G ++G S PLP D F+ Sbjct: 472 FILETIAMMSHKLNVHTVVEGVETNEQLKILKQLGFNTIQGYLFSRPLPEDDFI 525 >UniRef50_Q2BNG9 PAS sensor diguanylate cyclase/phosphodiesterase n=1 Tax=Neptuniibacter caesariensis RepID=Q2BNG9_9GAMM Length = 948 Score = 77.8 bits (190), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 55/236 (23%), Positives = 113/236 (47%), Gaps = 16/236 (6%) Query: 114 HYNIYYQPIYNAKNGNIAGCDVTIALKNSDGSAFA------LDSDRINYNPNDNKVSYLF 167 + I+YQP + + GN+ G + + ++S+ + L ++ P V Sbjct: 704 EFRIFYQPQIDTRTGNVMGVEALLRWQHSEAGMISPAKFIPLAEEQGLIVPIGEWVLRES 763 Query: 168 GHINKLFSPIKNNLPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKE 227 + K++ ++ F I +NI + I+ + + G L L+ + Sbjct: 764 CRMGKIW----HDQGMDFRIGVNIAGQQIMHESLMGTVQTALDESGIRPHLLDLEVT--- 816 Query: 228 ELYIIRRYQ---SSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIES 284 E +++++ + L + R + LS++DFG G++ LS+L+ +P + + + ++ DI S Sbjct: 817 ENFLLKQPEITIPKLHKFREMGLSLSMDDFGTGFSSLSYLKKLPINTLKIDQSFVRDIGS 876 Query: 285 NSLTDIIATTIIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPAD 340 + + I II L+K L ++ +A+G+ET +Q Y+ G ++G S PLPA+ Sbjct: 877 DPEGEAIVKAIIVLAKSLGLEALAEGVETSEQLSYLRTHGCHLIQGYYFSRPLPAE 932 >UniRef50_C5CTK8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Variovorax paradoxus S110 RepID=C5CTK8_VARPS Length = 1107 Score = 77.8 bits (190), Expect = 5e-13, Method: Composition-based stats. Identities = 49/171 (28%), Positives = 86/171 (50%), Gaps = 2/171 (1%) Query: 178 KNNLPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQS 237 K LP +++N++P + + + ++ G E L L+ + + Sbjct: 926 KYGLPK-VLMSVNLSPRQFESRTLIADIQAVLEASGLEPSLLELEITEGAVMANPEHAAK 984 Query: 238 SLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIID 297 LR IR+ V L+++DFG GY+ LS+L++ P S V + ++ +D+ ++ + II Sbjct: 985 LLRAIRDMGVGLAIDDFGTGYSSLSYLKHFPLSTVKIDRSFINDLSQDADARALIDGIIT 1044 Query: 298 LSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLLA 348 L+ L + V+A+GIET Q Y+ G +G L P+PAD VR +A Sbjct: 1045 LAHGLRMKVVAEGIETTAQLDYLRSHGCDEAQGYWLCKPVPADE-VRNFMA 1094 >UniRef50_Q7W9Y7 Putative membrane protein n=2 Tax=Bordetella RepID=Q7W9Y7_BORPA Length = 524 Score = 77.8 bits (190), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 54/249 (21%), Positives = 113/249 (45%), Gaps = 23/249 (9%) Query: 102 LPVVSSKGESMAHYNIYYQPIYNAKNGNIAGCDVTIALKNSDGSAFALD-----SDRINY 156 LP + G + + YQP+ G G + I + +G A D ++R+ Sbjct: 273 LPQLIRSGLRRNEFYMVYQPMVEVGTGRCVGAEALIRWRRRNGDLIAPDVFIDEAERVG- 331 Query: 157 NPNDNKVSYLFGHIN-KLFSPIKNNLPHG------FFITININPEDILTCDIERECLHFI 209 L G I ++F + +++ +I+IN++ D+ + ER Sbjct: 332 ---------LIGKITERVFELVSSDVQRWRGRLGDLYISINVSAADMASGAAERLLSEMF 382 Query: 210 KVFGTERIRLVLQFSTKEELYIIRRYQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPF 269 G ++V++ + + L+ ++++ IR ++++DFG GY+ L++L + Sbjct: 383 ARTGLTPSQVVVELTERALLHSDEAV-AAIKIIRKMGGRVAIDDFGTGYSSLAYLTSFEV 441 Query: 270 SYVNLHKTMFHDIESNSLTDIIATTIIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLK 329 + + K I ++ + ++ II+++K L + V+A+G+ET Q ++ E GV Y + Sbjct: 442 DGLKIDKRFVDAIGRDAPSSSVSVHIIEMAKSLGLRVVAEGVETAGQQRFLSEHGVDYAQ 501 Query: 330 GIALSSPLP 338 G P+P Sbjct: 502 GWLFGRPMP 510 >UniRef50_B9JND8 Kinase protein n=1 Tax=Agrobacterium radiobacter K84 RepID=B9JND8_AGRRK Length = 567 Score = 77.8 bits (190), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 48/162 (29%), Positives = 83/162 (51%), Gaps = 6/162 (3%) Query: 182 PHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSLRR 241 P + + +N++P + LT + V G RL L+ + E ++ R ++L Sbjct: 384 PVHYTVAVNLSPAEFLTPGFTDRVAQTLDVVGFPSERLELEIT---ESVLLERTINNLDT 440 Query: 242 IRNNNVY---LSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDL 298 + NV +SL+DFG Y+ LS+L+N PF + + K D+ + + I ++I L Sbjct: 441 LNTLNVLGIQISLDDFGTEYSSLSYLKNFPFDNIKIDKYFIKDLLRDGKSQTIVRSVIAL 500 Query: 299 SKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPAD 340 + L + V A+G+ET +QA ++ G L+G LS P+ AD Sbjct: 501 AHGLDMRVTAEGVETAQQATWLQSEGCDRLQGYFLSPPMGAD 542 >UniRef50_D0ZGP0 Diguanylate cyclase/phosphodiesterase n=2 Tax=Edwardsiella RepID=D0ZGP0_EDWTE Length = 668 Score = 77.8 bits (190), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 58/235 (24%), Positives = 109/235 (46%), Gaps = 9/235 (3%) Query: 115 YNIYYQPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINKLF 174 + +Y QP + ++ +AG + I DG + S I + L + K Sbjct: 428 FELYLQPQIDLRSQRLAGAEALIRWHRQDGGC-SEPSQFIPLAEEQGGIVALGEWVLKEA 486 Query: 175 SPIKNNLPH-GFFITININPEDILTCDIE--RECLHFIKVFGTERIRLVLQFSTKEELYI 231 I + G I +++N + D + ++ RL L+ + + Sbjct: 487 VRILVDWQRRGLTIPLSLNVSALQLVDARFGQRLETLLQQHAISAQRLHLEITETAYISD 546 Query: 232 IRRYQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIE-SNSLTDI 290 IRR +L R+RN V ++L+DFGMGYA L++L+++P + + K+ I +L I Sbjct: 547 IRRAADTLDRLRNQGVRVALDDFGMGYAGLNYLRHLPVDILKIDKSFIDQIPLDGALVRI 606 Query: 291 IATTIIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRK 345 + + +++ L +DV+A+G+ET+ Q +++ G+ Y +G S L F+ K Sbjct: 607 VGS----IAEVLSLDVVAEGVETQGQCDWLLANGIHYAQGYFFSPALSQRDFLAK 657 >UniRef50_Q1NJA1 PAS:GGDEF:EAL n=7 Tax=delta proteobacterium MLMS-1 RepID=Q1NJA1_9DELT Length = 941 Score = 77.8 bits (190), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 36/114 (31%), Positives = 62/114 (54%) Query: 237 SSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTII 296 S ++ +R+ + S++DFG GY+ L+ L+ +P + + + D+ S+ D I TII Sbjct: 819 SKMQELRDLGIGFSMDDFGTGYSSLAQLKRLPLEQLKIDRAFVRDLGSDPHDDAIVETII 878 Query: 297 DLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLLASL 350 + + L I VIA+G+ETK+Q + G +G S P+PA F L + + Sbjct: 879 AMGRTLDIQVIAEGVETKEQLATLARYGCDAYQGYLFSRPVPAAQFAHLLTSGV 932 >UniRef50_Q47X88 Sensory box sensor/GGDEF/EAL domain protein n=2 Tax=Colwellia psychrerythraea 34H RepID=Q47X88_COLP3 Length = 1086 Score = 77.8 bits (190), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 66/253 (26%), Positives = 120/253 (47%), Gaps = 20/253 (7%) Query: 108 KGESMAHYNIYYQPIYNAKNGNIAGCDVTIALKN--------SDGSAFALDSDRINYNPN 159 K S+ ++YQPI + G I + + K+ ++ A +S I Sbjct: 828 KAISLNQLEVFYQPIVELQTGVIRKAEALLRWKHPVRGMVSPAEFIPLAEESGLI-IEIG 886 Query: 160 DNKVSYLFGHINKLFSPIKNNLPHGFFITININPEDILTCDIERECLHFIKVFGTERIRL 219 D HIN K+ L I++N +P + + L ++ + Sbjct: 887 DWVFKQTVQHIN----TCKDQLGLDIQISVNKSPVQFRESIDQLDWLAYLAENQLPGENI 942 Query: 220 VLQFSTKEELYIIRRYQSSLRRI---RNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHK 276 V++ + E ++ S++ R+ R+ + LS++DFG GY+ LS+L+ Y+ + + Sbjct: 943 VIEIT---EGLLMNNNTSTMERLSKFRSAGIGLSMDDFGTGYSSLSYLKKFALDYLKIDQ 999 Query: 277 TMFHDIESNSLTDIIATTIIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSP 336 + +I S I++ II ++++L + VIA+GIETK+Q +I G Y +G S P Sbjct: 1000 SFTRNIAPGSEDMILSEAIITMAQKLGLKVIAEGIETKEQMELLIGAGCDYGQGYYFSRP 1059 Query: 337 LPADAFVRKLLAS 349 +PA+ F+ +LLAS Sbjct: 1060 IPAEDFL-QLLAS 1071 >UniRef50_Q2W3S8 Predicted signal transduction protein containing a membrane domain n=4 Tax=Bacteria RepID=Q2W3S8_MAGSA Length = 548 Score = 77.8 bits (190), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 58/245 (23%), Positives = 112/245 (45%), Gaps = 21/245 (8%) Query: 114 HYNIYYQPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDN-KVSYLFGHINK 172 + ++YQP +A I G + I +D +R P + V+ G I Sbjct: 305 EFVVFYQPKVSADRDAIVGAEALIRW---------MDPERGMVPPGEFIPVAEESGQIEP 355 Query: 173 LF------SPIKNNLPH--GF---FITININPEDILTCDIERECLHFIKVFGTERIRLVL 221 + S I+N L GF +++N++ + + + + G + L L Sbjct: 356 IGTWVLRQSCIQNRLWQEAGFNPIKVSVNVSARQFRSPSLLQTVTEVLDSTGLDPKWLEL 415 Query: 222 QFSTKEELYIIRRYQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHD 281 + + + + ++ +R+ + LS++DFG GY+ LS+L P + + + + D Sbjct: 416 EITESMLMNDVDTAVRKMKALRDLGIGLSIDDFGTGYSSLSYLGRFPITTLKIDRAFIAD 475 Query: 282 IESNSLTDIIATTIIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADA 341 +++N T IA II LS+ L+++V+A+G E + ++ G ++G S P+PAD Sbjct: 476 VDTNPKTAEIARAIIGLSRGLNLEVVAEGAEIAEHIMFLRNNGCDTVQGFYYSRPVPADE 535 Query: 342 FVRKL 346 F R + Sbjct: 536 FERMM 540 >UniRef50_C8S5L4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Rhodobacter sp. SW2 RepID=C8S5L4_9RHOB Length = 854 Score = 77.8 bits (190), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 43/159 (27%), Positives = 82/159 (51%), Gaps = 6/159 (3%) Query: 187 ITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSLRR---IR 243 ++IN++ + + D L I+ G RL L+ + E ++ ++R+ ++ Sbjct: 685 LSINVSANQLHSEDFVETVLGAIERHGARPRRLKLEIT---ESLLVNNLDDAIRKMTALQ 741 Query: 244 NNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSKQLH 303 + + SL+DFG GY+ LS+L+ +P + + ++ D+ N IA I+ L + L Sbjct: 742 QHEILFSLDDFGTGYSSLSYLKQLPLDQLKIDRSFVSDLPQNKNDAAIAEMIVALGRTLG 801 Query: 304 IDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAF 342 + VIA+G+ET++Q G++ G +G P+P D F Sbjct: 802 LHVIAEGVETEEQKGFLEGIGCDQFQGYLFGVPMPLDQF 840 >UniRef50_A0KT96 EAL domain protein n=9 Tax=Shewanella RepID=A0KT96_SHESA Length = 519 Score = 77.8 bits (190), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 51/229 (22%), Positives = 106/229 (46%), Gaps = 11/229 (4%) Query: 114 HYNIYYQPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINKL 173 + + YQP+ ++++G G + + ++ D + P + + N + Sbjct: 284 EFFLVYQPVVSSEDGKAKGVEALVRWQHPQMGLVRPDL----FIPIAEESQLIVPLTNYI 339 Query: 174 FSPI-----KNNLPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEE 228 F + L F I N+ PE + DIE + + F ++ +++ + ++ Sbjct: 340 FERALADFRQLQLTSDFRIGFNVAPEHFIQSDIEAKFRYLRDAFAEIGVQPLIEITERQL 399 Query: 229 LYIIRRYQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLT 288 L + + +R + ++++DFG G LS LQ Y+ + K I +S+T Sbjct: 400 LTV--DMCERIAALRELGILVAIDDFGTGQTTLSLLQTFTLDYLKIDKCFIDTIGQDSVT 457 Query: 289 DIIATTIIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPL 337 + TII+L +++ +A+G+ET++QA Y+I R V +L+G + P+ Sbjct: 458 SHVLDTIIELCHKMNYVAVAEGVETQEQADYLISRDVHFLQGYLYAKPM 506 >UniRef50_Q39X25 Diguanylate cyclase/phosphodiesterase n=2 Tax=Geobacter RepID=Q39X25_GEOMG Length = 633 Score = 77.8 bits (190), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 39/157 (24%), Positives = 78/157 (49%) Query: 187 ITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSLRRIRNNN 246 + +N++P + D+ + G LV++ + + + RR+ Sbjct: 460 VAVNLSPRQLRQGDLSETVARVLAETGLAPGWLVIEVTESILMDDAEETIRTFRRLDRMG 519 Query: 247 VYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSKQLHIDV 306 V +S++DFG GY+ L +L+ P + + ++ +I SN + IA +I ++K L++ V Sbjct: 520 VRISIDDFGTGYSSLHYLKKFPVHTLKIDRSFVREIASNPDDEAIAGAVISMAKGLNLGV 579 Query: 307 IADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFV 343 +A+G+ET +Q + +Y++G S P PA+ F Sbjct: 580 VAEGVETVEQMEVLRALNCRYMQGFLFSEPAPAEQFT 616 >UniRef50_B3PHS3 Sensory box/GGDEF family protein n=1 Tax=Cellvibrio japonicus Ueda107 RepID=B3PHS3_CELJU Length = 856 Score = 77.8 bits (190), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 58/240 (24%), Positives = 114/240 (47%), Gaps = 15/240 (6%) Query: 114 HYNIYYQPIYNAKNGNIAGCDVTI-ALKNSDGSAFALDSDRINYN-----PNDNKVSYLF 167 + +YYQP + + G I G + I L G +D I P N + L Sbjct: 623 QFKLYYQPQVD-RTGRITGAEALIRWLHPERGMISPMDFIPIAEESGLILPLGNWI--LD 679 Query: 168 GHINKLFSPIKNNLPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKE 227 +L +N L ++IN++ D + L + G +L L+ + Sbjct: 680 AACQQLIHWKQNPLTAALTLSINVSARQFQQPDFVTQVLAAVTRTGANPHQLTLELT--- 736 Query: 228 ELYIIRRYQ---SSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIES 284 E + Q + + ++++ + SL+DFG GY+ LS+L+ +P + + + K+ +DI + Sbjct: 737 ESILATNQQDIITKMDALKSHGIKFSLDDFGTGYSSLSYLKRLPINELKIDKSFVNDILT 796 Query: 285 NSLTDIIATTIIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVR 344 + IA +I L++ + ++VIA+G+ET++Q ++ + G + +G P+ A+ F+R Sbjct: 797 DPNDAAIARMVIRLAQSMELNVIAEGVETQRQRDWLEQEGCLHYQGYYFGKPVGAEEFLR 856 >UniRef50_Q82TH8 Diguanylate cyclase/phosphodiesterase domain 2 (EAL) n=1 Tax=Nitrosomonas europaea RepID=Q82TH8_NITEU Length = 616 Score = 77.4 bits (189), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 48/234 (20%), Positives = 106/234 (45%), Gaps = 10/234 (4%) Query: 116 NIYYQPIYNAKNGNIAGCDVTIALKNSDGSA-----FALDSDRINYNPN-DNKVSYLFGH 169 +++YQP NA+ + G + + K+ A F +++ P + + Sbjct: 362 DMHYQPKLNAQTLQVTGVEALVRWKHPQKGAIPPARFVGIAEQCGLMPALGTNILRMVAR 421 Query: 170 INKLFSPIKNNLPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEEL 229 + + + +P I +N++ I E L ++ + + + ++ + + Sbjct: 422 QARAWQEVGMPMP----IAVNVSAVQFERSGIANEILAILEQHAVDPLLIEIELTESMIM 477 Query: 230 YIIRRYQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTD 289 +S L ++R +S++DFG GY+ L L ++PF+ + + K++ DI NS ++ Sbjct: 478 SDFATAKSRLEQLREAGAQISIDDFGTGYSNLYQLSHLPFNVLKIDKSLVDDIGKNSKSE 537 Query: 290 IIATTIIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFV 343 I T I+ + L V+A+G+ET +Q ++ + ++G P+PA + Sbjct: 538 AIVTAIVQMVHSLGHRVVAEGVETHEQYAFLRKARCDQVQGYLFGRPMPAHELI 591 >UniRef50_B0UAD7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylobacterium sp. 4-46 RepID=B0UAD7_METS4 Length = 1034 Score = 77.4 bits (189), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 50/222 (22%), Positives = 97/222 (43%), Gaps = 1/222 (0%) Query: 117 IYYQPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINKLFSP 176 + YQP+++ G ++G + + N F + I ++ + + Sbjct: 791 LAYQPVFDLAGGRVSGFEALVRW-NHPVRGFVSPAQFIPIAEQTGQIEAIGAFVLDRACR 849 Query: 177 IKNNLPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQ 236 LP G + +N++P + DI + G RL L+ + + R Sbjct: 850 DAAALPPGIRVAVNLSPVQLRAEDIVERIATALAESGLAPARLELEITETALMEDSERMV 909 Query: 237 SSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTII 296 L RIR V + L+DFG GY+ LS+L+ PF + + ++ ++ + + + I + I+ Sbjct: 910 QLLERIRALGVRIVLDDFGTGYSSLSYLRTFPFHKIKIDQSFVREMTTRANSLAIVSAIV 969 Query: 297 DLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLP 338 L+ +L + A+GIET ++ + G + +G L P P Sbjct: 970 GLADELGMATTAEGIETADHLDFVRKVGCREAQGYFLGKPKP 1011 >UniRef50_Q7NYX4 Putative uncharacterized protein n=1 Tax=Chromobacterium violaceum RepID=Q7NYX4_CHRVO Length = 795 Score = 77.4 bits (189), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 34/107 (31%), Positives = 62/107 (57%) Query: 237 SSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTII 296 S L +++ V+LS++DFG GY+ LSHL+ P + + ++ + + IA I+ Sbjct: 676 SLLSELKSLGVWLSIDDFGTGYSSLSHLKRFPLDTLKIDQSFVEGLPDDDDNAAIAEAIL 735 Query: 297 DLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFV 343 ++K+L V+A+G+E+++QA ++ +G L+G PLPA F Sbjct: 736 AMAKKLKFQVVAEGVESEEQAAFLEGKGCHVLQGYHFGRPLPAGEFA 782 >UniRef50_Q1YFA8 Putative diguanylate cyclase (GGDEF)/phosphodiesterase (EAL) n=1 Tax=Aurantimonas manganoxydans SI85-9A1 RepID=Q1YFA8_MOBAS Length = 624 Score = 77.4 bits (189), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 63/232 (27%), Positives = 109/232 (46%), Gaps = 16/232 (6%) Query: 118 YYQPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVS-----YLFGHINK 172 YYQP+ I G + + DG + + + +DNKV+ +F I + Sbjct: 371 YYQPVVRLDTAEIVGLEALARMVTPDGRI--VAAGAFSAAFSDNKVASRISERMFAQIAR 428 Query: 173 -LFSPIKNNLP--HGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEEL 229 L + I LP H + IN+ P D + D+E L + G +LV++ + L Sbjct: 429 DLAAWIARGLPIQH---VGINLAPADFESGDLEARFLAPFEAAGVPYHQLVVEVTENVFL 485 Query: 230 -YIIRRYQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLT 288 + SL R+RN V +SL+DFG G+A L+HL +P + + ++ + +++ + Sbjct: 486 DGLGEDVAESLTRLRNLGVLVSLDDFGTGFASLTHLLKLPVDIIKIDRSFVDQMLTDAPS 545 Query: 289 DIIATTIIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPAD 340 I ++ ++ +L + V+A+GIE QA + E G Y+ G PAD Sbjct: 546 SAIIEGLMGIADKLGMRVVAEGIENAGQAERLNELG--YVLGQGYHFARPAD 595 >UniRef50_C6P1Q1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P1Q1_9PROT Length = 1135 Score = 77.4 bits (189), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 42/167 (25%), Positives = 86/167 (51%), Gaps = 6/167 (3%) Query: 179 NNLPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFST---KEELYIIRRY 235 N L + +N++ + D + F++ + + +L L+ + +E + Sbjct: 960 NPLTRNLVLAVNVSAKQFRQSDFATQVRVFVEKYAIDPSKLKLELTESMLQENIEDTILI 1019 Query: 236 QSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTI 295 ++L+ I V SL+DFG GY+ L +++ +P + + + ++ HD++ + I I Sbjct: 1020 MNALKEI---GVQFSLDDFGTGYSSLQYIKKLPLNQLKIDQSFVHDLDFDRDDKAIVRAI 1076 Query: 296 IDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAF 342 I ++K L +DVIA+G+ET++Q ++ +G + +G S PLP F Sbjct: 1077 IAMAKSLQLDVIAEGVETQEQRQLLLNKGCTHFQGYLFSKPLPIREF 1123 >UniRef50_D0YY24 Putative uncharacterized protein n=1 Tax=Photobacterium damselae subsp. damselae CIP 102761 RepID=D0YY24_LISDA Length = 511 Score = 77.4 bits (189), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 61/243 (25%), Positives = 117/243 (48%), Gaps = 24/243 (9%) Query: 118 YYQPIYNAKNGNIAGCDVTIALKNSDGSAFALD--------SDRINYNPNDNKVSYLFGH 169 YYQPI +AKN G ++ + + D S+ I+ D L Sbjct: 268 YYQPIISAKNNRWCGAELLVRWNHPKAGLIPPDQFIHIAERSELIHQMTLD-----LIKQ 322 Query: 170 INKLFSPIKNNLPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEEL 229 I + I+ +PH +F +IN+ P I + + +++ + LV++ + +E Sbjct: 323 IALQKTYIEQLVPHSYF-SINMTPSMIANTQFVTKLVQILQMNPDLQHGLVIELTEREPF 381 Query: 230 YIIR--RYQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSL 287 + + + + +R+ V +L+DFG GY+ L+ LQ + F + + +T F ++ SN Sbjct: 382 SPAKLLKLKQGMDLLRSYGVKWALDDFGTGYSGLATLQQLSFDILKIDRT-FINLSSN-- 438 Query: 288 TDIIATTIID----LSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFV 343 D I+ +I+D + +LH ++A+G+ETK+QA Y + G++ +G + P+ D + Sbjct: 439 -DAISLSILDNIAQMGHKLHCSLVAEGVETKEQAQYAKKIGIEACQGYYYAKPMTFDDYY 497 Query: 344 RKL 346 L Sbjct: 498 HAL 500 >UniRef50_B8DLW6 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=5 Tax=Desulfovibrio RepID=B8DLW6_DESVM Length = 739 Score = 77.4 bits (189), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 31/105 (29%), Positives = 61/105 (58%) Query: 239 LRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDL 298 L R+ + ++++DFG G++ L +L+N P + + ++ D+ + I +TI+ + Sbjct: 610 LERLAAQGISIAIDDFGTGHSSLYYLKNFPIDTIKIDRSFVRDVPGDEGDATIVSTIVTM 669 Query: 299 SKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFV 343 + L ++V+A+G+ET Q G++ G + ++G S PLPAD F Sbjct: 670 GRNLSLNVVAEGVETDDQLGFLRAHGCREVQGYYYSKPLPADGFA 714 >UniRef50_A6UD61 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Sinorhizobium RepID=A6UD61_SINMW Length = 788 Score = 77.4 bits (189), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 43/161 (26%), Positives = 87/161 (54%), Gaps = 1/161 (0%) Query: 182 PHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSLRR 241 P +++N++ D+ +I +K G RL L+ + + R Q L + Sbjct: 594 PPEVAVSVNLSVLDLRGDEIVGVLTGILKETGLAPDRLHLEITESCLMADPARVQKVLHQ 653 Query: 242 IRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSKQ 301 +R + ++++DFG GY+ LS+L ++P S + + ++ HDI+ +S + I++L++ Sbjct: 654 LRAGGMTIAIDDFGTGYSSLSYLDSLPVSVIKIDRSFVHDIDEDSRHFKLLLGIVNLARA 713 Query: 302 LHIDVIADGIETKKQAGYMIERGVKYL-KGIALSSPLPADA 341 L + ++A+G+ET +Q + ER L +G ++P+PA A Sbjct: 714 LELKIVAEGVETPEQLQLLRERNCADLIQGFVFAAPMPASA 754 >UniRef50_C4ZM58 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Thauera sp. MZ1T RepID=C4ZM58_THASP Length = 771 Score = 77.4 bits (189), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 43/166 (25%), Positives = 82/166 (49%) Query: 184 GFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSLRRIR 243 G + +N++ + E L + G RL L+ + L I R ++ R+R Sbjct: 588 GLVMAVNVSAAQLYEPGFVEEVLALLARTGAPAERLKLELTESLLLTDIERAIEAMTRLR 647 Query: 244 NNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSKQLH 303 + S++DFG GY+ L +LQ +P + + +T D+ +N+ + I TI+ L+ L Sbjct: 648 EMGIRFSIDDFGTGYSSLGYLQRLPLDELKIDRTFVRDLPANASSLAIVRTIMALADTLR 707 Query: 304 IDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLLAS 349 I V+A+G+ET Q +++ G +G + P ++F ++ A+ Sbjct: 708 IRVVAEGVETSAQHACLLDNGCDAFQGFLFARPEAVESFRARMSAT 753 >UniRef50_C5EQT5 RNase II stability modulator n=2 Tax=Clostridiales RepID=C5EQT5_9FIRM Length = 642 Score = 77.4 bits (189), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 52/238 (21%), Positives = 116/238 (48%), Gaps = 10/238 (4%) Query: 115 YNIYYQPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINKLF 174 + ++YQP+Y+ ++ + + + LK+ DG+ + + I + LF + + Sbjct: 404 FKVWYQPVYSLEDNCFSSAEALLRLKDYDGNPVS-PGEFIPIAEEKGMIDNLFWIVLEEV 462 Query: 175 SPIKNNLPHGFFITININP-----EDILTCDIERECLHFIKVFGTERIRLVLQFSTKEEL 229 + P G +I+IN ED + ++CL K T RL ++ + + L Sbjct: 463 CLLLQRTP-GQIKSISINLSMQQFEDRTLLERMKQCLD--KYHLTPE-RLKIEITERVLL 518 Query: 230 YIIRRYQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTD 289 + + + + + + L+DFG GY+ +S + ++PF Y+ L K++ I + + Sbjct: 519 QDMDYMKMMMEELTKSGICFYLDDFGTGYSNISCVLSLPFEYIKLDKSLLKGIPGDRKAE 578 Query: 290 IIATTIIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLL 347 ++ +++ + + + ++A+G+E K+QA + E GV ++G P+P + F+ +L Sbjct: 579 LLVKSMVKTFRSMGLKIVAEGVEEKEQAEMLKEFGVSSIQGYYYGKPMPEEEFLEYIL 636 >UniRef50_B9MED7 Diguanylate cyclase/phosphodiesterase n=1 Tax=Diaphorobacter sp. TPSY RepID=B9MED7_DIAST Length = 894 Score = 77.4 bits (189), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 35/156 (22%), Positives = 81/156 (51%) Query: 187 ITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSLRRIRNNN 246 +++N++ + D + + G RL L+ + L + + + ++R Sbjct: 723 LSVNVSARQFRSPDFVEQLSQLLLRSGAPAHRLELELTESLVLEDVEDSIAKMHQLRTKG 782 Query: 247 VYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSKQLHIDV 306 V +++DFG GY+ L++L +P + + +T H + + D++ TI+ +++ L ++V Sbjct: 783 VRFAVDDFGTGYSSLAYLTRLPLHRLKIDRTFVHHLGESRSDDVVVQTILGMARNLDLEV 842 Query: 307 IADGIETKKQAGYMIERGVKYLKGIALSSPLPADAF 342 +A+G+ET++Q ++ G +G L+ P+P +A Sbjct: 843 VAEGVETEEQRSFLALHGCDVYQGYLLAHPMPVEAL 878 >UniRef50_C6RJR5 Two-component response regulator n=4 Tax=Acinetobacter radioresistens RepID=C6RJR5_ACIRA Length = 855 Score = 77.4 bits (189), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 57/231 (24%), Positives = 107/231 (46%), Gaps = 9/231 (3%) Query: 114 HYNIYYQPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINK- 172 +N++YQP+ N G G + I N + I ++ + + K Sbjct: 615 QFNLFYQPLINPATGLAKGVEALIRW-NHPQRGYIFPDIFIPLAERTGQIVAIGQWVLKK 673 Query: 173 -LFSPIKNNLPHG--FFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEEL 229 + N H +++NI+P +E H + + + +L+ E + Sbjct: 674 ACMDIAEWNKTHQSQLTVSVNISPLQFRRAGFLQELEHALDI--STLTPELLKIEVTEGM 731 Query: 230 YII--RRYQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSL 287 II R L+ IR V +S++DFG GY+ LS+L+ +P + + L ++ + + Sbjct: 732 VIIGADRAIEILKSIRELGVQVSIDDFGTGYSSLSYLRRLPINQIKLDRSFIEHLTESDQ 791 Query: 288 TDIIATTIIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLP 338 I +II L+ QL+++V+A+G+ET KQA ++ ++G L+G + P P Sbjct: 792 DAAIVQSIIHLAHQLNLEVVAEGVETLKQAAFLYQQGCDLLQGYFYARPAP 842 >UniRef50_B4U5Q0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Hydrogenobaculum sp. Y04AAS1 RepID=B4U5Q0_HYDS0 Length = 1122 Score = 77.4 bits (189), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 57/242 (23%), Positives = 112/242 (46%), Gaps = 17/242 (7%) Query: 115 YNIYYQPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPND----NKVSYLF--- 167 + +YQP ++ K + G + I + + DGS + I+Y + N+ +F Sbjct: 889 FKFFYQPYFDIKTKDFVGFEALIRIIDEDGSIIS-PYKFIDYLESSSYFLNRFQEVFLKM 947 Query: 168 --GHINKLFSPIKNNLPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFST 225 +N S K++ F I+ N +DI + C F +LV++ + Sbjct: 948 VESDMNTFISKAKSHFSSAFNISANSFKDDIFMSKLIGLCHKF-------EDKLVIEITE 1000 Query: 226 KEELYIIRRYQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESN 285 + L + + LR IR+ ++L+DFG Y+ LS+++N+ + + + DI + Sbjct: 1001 RMLLSDFEKAKEILRNIRSVGSKVALDDFGTYYSSLSYVKNVELDIIKIDISFIKDIVFD 1060 Query: 286 SLTDIIATTIIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRK 345 + + II+L+K L I IA+G+E ++Q + E G +G + P+P + V+ Sbjct: 1061 KRSLAVVKAIINLAKALDIKTIAEGVEKEEQYNLLKEAGCDIAQGYLFAKPMPIEEAVKY 1120 Query: 346 LL 347 ++ Sbjct: 1121 II 1122 >UniRef50_Q1K435 Diguanylate cyclase/phosphodiesterase n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1K435_DESAC Length = 764 Score = 77.4 bits (189), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 69/301 (22%), Positives = 135/301 (44%), Gaps = 28/301 (9%) Query: 56 VSCQKMKLYKKLNVKSDLTLWRDVFLRFKAYLQP---KNIICDNFNSSVLPVVSSKGESM 112 + C + LYK VK R FL + A + + ++ +N KG Sbjct: 470 LRCADLALYKSKTVK------RGEFLFYSAEMNEQAQRRLLVEN--------QLRKGLER 515 Query: 113 AHYNIYYQPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHI-N 171 +YYQP+Y + + C+ + N + D + I ++ L + N Sbjct: 516 EELTVYYQPLYQPQTDQVTCCEALLRWNNPELGPVRPD-EFIEVAEESGQIEALGQFVLN 574 Query: 172 KLFSPIKN-NLPH--GFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEE 228 + + I NL + +NI+ + +L I + + + L ++ + E Sbjct: 575 RALTDISQLNLQRHTPMQVAVNISAKQLLYSPIVEQLQQALSHQSLDASLLKIEIT---E 631 Query: 229 LYIIRRYQSS---LRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESN 285 +I ++++ LR+IR V+++L+DFG GY+ L++L +P + + K ++ + Sbjct: 632 SVLIADFETAVMVLRQIRQLGVHVALDDFGTGYSSLAYLSRLPCEEIKIDKEFVQNMLIH 691 Query: 286 SLTDIIATTIIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRK 345 + + +II ++K L+ V+A+G+ET + + G Y++G +S P+P DAF R Sbjct: 692 RDDENLVQSIIAMAKALNRRVVAEGVETLEHLEKLTLFGCDYIQGYYISPPVPLDAFSRF 751 Query: 346 L 346 L Sbjct: 752 L 752 >UniRef50_C6XA09 Diguanylate cyclase/phosphodiesterase with extracellular sensor n=2 Tax=Methylophilaceae RepID=C6XA09_METSD Length = 782 Score = 77.4 bits (189), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 41/156 (26%), Positives = 82/156 (52%) Query: 187 ITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSLRRIRNNN 246 I +N++ D++ D+ + L + G + L+ + + +R Q +L R+ + Sbjct: 612 IAVNLSTRDLIDQDLPHKILTLHQDAGLALGGITLEITESSMMDDPQRAQQTLERLSDMG 671 Query: 247 VYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSKQLHIDV 306 + LS++DFG GY+ L++L+ +P S + + K+ +E + I + IDL L++ V Sbjct: 672 LQLSIDDFGTGYSSLAYLKRLPVSELKIDKSFVLKMEEDENDRKIVRSTIDLGHNLNLKV 731 Query: 307 IADGIETKKQAGYMIERGVKYLKGIALSSPLPADAF 342 +A+GIE++ + G + +G +S P+PA F Sbjct: 732 VAEGIESRAAWDLLASMGCDFGQGYHISKPMPAADF 767 >UniRef50_A1K5K2 Conserved hypothetical signaling protein n=2 Tax=Proteobacteria RepID=A1K5K2_AZOSB Length = 1089 Score = 77.4 bits (189), Expect = 8e-13, Method: Composition-based stats. Identities = 37/114 (32%), Positives = 63/114 (55%) Query: 238 SLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIID 297 +LR ++N V +SL+DFG GY L++L+ P + + + D+ +++ IA I+ Sbjct: 969 TLRELKNIGVRISLDDFGTGYCSLNYLKRFPIDSIKIDRCFVTDLATSAEDAAIALMIVS 1028 Query: 298 LSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLLASLK 351 L+ L+ VIA+G+E + Q ++ G ++G S PLPA F R L A + Sbjct: 1029 LAHSLNQTVIAEGVENEAQLDFLRRHGCDEMQGFLFSRPLPAAEFARLLAAGTR 1082 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_Q9JMT8 Uncharacterized HTH-type transcriptional regulat... 442 e-122 UniRef50_P21514 Cyclic di-GMP phosphodiesterase yahA n=51 Tax=Es... 393 e-108 UniRef50_A1K5K2 Conserved hypothetical signaling protein n=2 Tax... 363 5e-99 UniRef50_A6SVJ0 Uncharacterized conserved protein n=4 Tax=Proteo... 357 2e-97 UniRef50_C5S5K8 Response regulator receiver modulated diguanylat... 355 9e-97 UniRef50_B9LZ98 Diguanylate cyclase/phosphodiesterase with PAS/P... 355 2e-96 UniRef50_A1ASK8 Response regulator receiver modulated diguanylat... 354 2e-96 UniRef50_Q2BMA7 PAS:GGDEF protein n=1 Tax=Neptuniibacter caesari... 353 6e-96 UniRef50_A1TLA6 Diguanylate cyclase/phosphodiesterase n=2 Tax=Ac... 352 8e-96 UniRef50_C1D1W4 Putative diguanylate-cyclase n=1 Tax=Deinococcus... 352 2e-95 UniRef50_B2JCW5 Diguanylate cyclase/phosphodiesterase with PAS/P... 351 2e-95 UniRef50_B8GSM4 Diguanylate cyclase/phosphodiesterase n=1 Tax=Th... 351 3e-95 UniRef50_B8DLW6 Response regulator receiver modulated diguanylat... 350 4e-95 UniRef50_Q20JY5 Sensory box/GGDEF family protein n=1 Tax=uncultu... 350 4e-95 UniRef50_B9Z8G8 Diguanylate cyclase/phosphodiesterase with PAS/P... 350 4e-95 UniRef50_B3PCE8 Sensory box/GGDEF family protein n=2 Tax=Gammapr... 350 4e-95 UniRef50_C6XAD3 Diguanylate cyclase/phosphodiesterase with PAS/P... 350 5e-95 UniRef50_C5V3L4 Diguanylate cyclase/phosphodiesterase with PAS/P... 350 6e-95 UniRef50_A4J477 Diguanylate cyclase/phosphodiesterase with PAS/P... 349 8e-95 UniRef50_Q07P60 Diguanylate cyclase/phosphodiesterase with PAS/P... 349 8e-95 UniRef50_B7KTV8 Diguanylate cyclase/phosphodiesterase with PAS/P... 349 8e-95 UniRef50_B8GMU1 Diguanylate cyclase/phosphodiesterase with PAS/P... 349 9e-95 UniRef50_Q39X25 Diguanylate cyclase/phosphodiesterase n=2 Tax=Ge... 349 1e-94 UniRef50_C5CTK8 Diguanylate cyclase/phosphodiesterase with PAS/P... 348 2e-94 UniRef50_B8H3B9 Sensory box/GGDEF family protein n=5 Tax=Cauloba... 347 3e-94 UniRef50_C6ML43 Response regulator receiver modulated diguanylat... 347 3e-94 UniRef50_A1WHK3 Diguanylate cyclase/phosphodiesterase with PAS/P... 347 5e-94 UniRef50_C1DA12 Sensory box/GGDEF family protein n=1 Tax=Laribac... 346 6e-94 UniRef50_Q3A4W5 Response regulator receiver modulated diguanylat... 346 8e-94 UniRef50_C4L9X9 Diguanylate cyclase/phosphodiesterase with PAS/P... 345 2e-93 UniRef50_A6T0F0 Sensory box/GGDEF family protein n=2 Tax=Oxaloba... 345 2e-93 UniRef50_B1M2C0 Diguanylate cyclase/phosphodiesterase with PAS/P... 344 3e-93 UniRef50_A1WHK4 Diguanylate cyclase/phosphodiesterase with PAS/P... 344 4e-93 UniRef50_Q12GF0 Diguanylate cyclase/phosphodiesterase (GGDEF & E... 344 4e-93 UniRef50_B2T9B2 Diguanylate cyclase/phosphodiesterase with PAS/P... 342 8e-93 UniRef50_B1XXA0 Diguanylate cyclase/phosphodiesterase with PAS/P... 342 8e-93 UniRef50_C4L987 Diguanylate cyclase/phosphodiesterase with PAS/P... 342 1e-92 UniRef50_B1M4V3 Diguanylate cyclase/phosphodiesterase with PAS/P... 342 1e-92 UniRef50_A3DCG7 Diguanylate cyclase/phosphodiesterase with PAS/P... 342 1e-92 UniRef50_Q1K1R0 Response regulator receiver modulated diguanylat... 342 1e-92 UniRef50_Q98BI1 Mll5564 protein n=2 Tax=Mesorhizobium RepID=Q98B... 342 1e-92 UniRef50_Q74A79 Sensory box/GGDEF family protein n=1 Tax=Geobact... 342 1e-92 UniRef50_Q7NZ89 Putative uncharacterized protein n=1 Tax=Chromob... 342 2e-92 UniRef50_A1W7N9 Diguanylate cyclase/phosphodiesterase with PAS/P... 341 3e-92 UniRef50_A6T1A8 Sensory box/GGDEF family protein n=1 Tax=Janthin... 341 3e-92 UniRef50_Q2J3Q8 Diguanylate cyclase/phosphodiesterase with GAF s... 341 3e-92 UniRef50_Q47HF3 Response regulator receiver modulated diguanylat... 340 3e-92 UniRef50_Q1NQ51 PAS:GGDEF:EAL n=1 Tax=delta proteobacterium MLMS... 340 4e-92 UniRef50_D1U882 Diguanylate cyclase/phosphodiesterase with PAS/P... 340 4e-92 UniRef50_C0Z6C0 Probable signaling protein n=1 Tax=Brevibacillus... 340 5e-92 UniRef50_C6P464 Diguanylate cyclase/phosphodiesterase with PAS/P... 340 6e-92 UniRef50_Q2W3S8 Predicted signal transduction protein containing... 340 6e-92 UniRef50_C7RMB6 Diguanylate cyclase/phosphodiesterase with PAS/P... 339 8e-92 UniRef50_C6P1A0 Diguanylate cyclase/phosphodiesterase with PAS/P... 339 8e-92 UniRef50_A1K4Z0 EAL/GGDEF/PAS/PAC-domain containing signalling p... 339 1e-91 UniRef50_Q1NRJ4 PAS:GGDEF:EAL:GAF n=5 Tax=Deltaproteobacteria Re... 338 2e-91 UniRef50_Q47UD6 Sensory box sensor/GGDEF/EAL domain protein n=1 ... 338 2e-91 UniRef50_C6XAG8 Diguanylate cyclase/phosphodiesterase with PAS/P... 338 2e-91 UniRef50_Q3SK01 Putative diguanylate cyclase/phosphodiesterase (... 337 2e-91 UniRef50_Q9ABX9 Uncharacterized signaling protein CC_0091 n=3 Ta... 337 4e-91 UniRef50_A5ERD3 Diguanylate cyclase/phosphodiesterase n=12 Tax=B... 337 4e-91 UniRef50_D0IZ49 Diguanylate cyclase/phosphodiesterase with n=2 T... 337 5e-91 UniRef50_B3PHS3 Sensory box/GGDEF family protein n=1 Tax=Cellvib... 336 9e-91 UniRef50_D0IUW1 Diguanylate cyclase/phosphodiesterase with n=3 T... 335 1e-90 UniRef50_Q608F9 Sensory box protein n=1 Tax=Methylococcus capsul... 335 1e-90 UniRef50_D1AZY7 Diguanylate cyclase n=1 Tax=Sulfurospirillum del... 335 1e-90 UniRef50_Q1JXC9 Diguanylate cyclase/phosphodiesterase with PAS/P... 335 1e-90 UniRef50_Q47GC0 Diguanylate cyclase/phosphodiesterase with PAS/P... 335 2e-90 UniRef50_A1K5F7 EAL/GGDEF-domain containing signaling protein n=... 335 2e-90 UniRef50_B7GID3 Multidomain signal transduction protein (Contain... 335 2e-90 UniRef50_A1KCA9 GGDEF/EAL/PAS/PAC-domain containing protein n=1 ... 335 2e-90 UniRef50_B1Y791 Diguanylate cyclase/phosphodiesterase with PAS/P... 335 2e-90 UniRef50_C6P6Y2 Diguanylate cyclase/phosphodiesterase with PAS/P... 334 2e-90 UniRef50_A4U3H4 PAS:GGDEF n=1 Tax=Magnetospirillum gryphiswalden... 334 3e-90 UniRef50_Q2SFK1 FOG: EAL domain n=1 Tax=Hahella chejuensis KCTC ... 334 3e-90 UniRef50_Q47IR9 Diguanylate cyclase/phosphodiesterase with PAS/P... 334 3e-90 UniRef50_Q2Y9Y0 Response regulator receiver (CheY-like) modulate... 334 3e-90 UniRef50_C9P6X4 Diguanylate cyclase/phosphodiesterase with PAS/P... 334 3e-90 UniRef50_Q20XI9 Diguanylate cyclase/phosphodiesterase n=11 Tax=B... 334 3e-90 UniRef50_C6P1Q1 Diguanylate cyclase/phosphodiesterase with PAS/P... 334 4e-90 UniRef50_C6XEG9 Diguanylate cyclase/phosphodiesterase with PAS/P... 334 5e-90 UniRef50_A7K0U5 Sensory box/GGDEF family protein n=14 Tax=Vibrio... 333 5e-90 UniRef50_Q2SQ18 Predicted signal transduction protein containing... 333 6e-90 UniRef50_C6NZZ7 Diguanylate cyclase/phosphodiesterase with PAS/P... 333 7e-90 UniRef50_Q609J7 Sensory box protein n=1 Tax=Methylococcus capsul... 333 8e-90 UniRef50_C5V2W0 Response regulator receiver modulated diguanylat... 332 8e-90 UniRef50_C6XBI7 Diguanylate cyclase/phosphodiesterase with PAS/P... 332 9e-90 UniRef50_C6X9G9 Diguanylate cyclase/phosphodiesterase with PAS/P... 332 1e-89 UniRef50_B1M8T6 Diguanylate cyclase/phosphodiesterase n=1 Tax=Me... 332 1e-89 UniRef50_Q47BF2 Diguanylate cyclase/phosphodiesterase with PAS/P... 332 1e-89 UniRef50_C6MBX5 Diguanylate cyclase/phosphodiesterase n=1 Tax=Ni... 332 1e-89 UniRef50_C7QU83 Sensor protein n=3 Tax=cellular organisms RepID=... 331 2e-89 UniRef50_Q1NJA1 PAS:GGDEF:EAL n=7 Tax=delta proteobacterium MLMS... 331 2e-89 UniRef50_Q7NYX4 Putative uncharacterized protein n=1 Tax=Chromob... 331 3e-89 UniRef50_A9BNX4 Diguanylate cyclase/phosphodiesterase n=3 Tax=Co... 331 3e-89 UniRef50_B7HSZ4 Response regulator receiver modulated diguanylat... 330 3e-89 UniRef50_B8DLV2 Diguanylate cyclase/phosphodiesterase with PAS/P... 330 4e-89 UniRef50_Q60BD0 Sensory box protein n=1 Tax=Methylococcus capsul... 330 4e-89 UniRef50_B4SHZ4 Diguanylate cyclase/phosphodiesterase n=26 Tax=B... 330 5e-89 UniRef50_B6IWY2 Diguanylate cyclase, putative n=1 Tax=Rhodospiri... 329 8e-89 Sequences not found previously or not previously below threshold: UniRef50_A1TX84 Response regulator receiver modulated diguanylat... 355 2e-96 UniRef50_A1WEV3 Diguanylate cyclase/phosphodiesterase with PAS/P... 354 2e-96 UniRef50_B0UQT2 Diguanylate cyclase/phosphodiesterase with PAS/P... 353 5e-96 UniRef50_A1KA22 GGDEF/EAL/PAS/PAC/GAF-domain containing protein ... 353 7e-96 UniRef50_C6MMM5 Response regulator receiver modulated diguanylat... 351 2e-95 UniRef50_B3EBJ5 Diguanylate cyclase/phosphodiesterase with PAS/P... 350 6e-95 UniRef50_A4G4R7 Putative uncharacterized protein n=1 Tax=Hermini... 349 8e-95 UniRef50_Q47ED8 Response regulator receiver modulated diguanylat... 349 1e-94 UniRef50_B3PHI4 Sensory box/GGDEF family protein n=1 Tax=Cellvib... 349 1e-94 UniRef50_C6X6V4 Diguanylate cyclase/phosphodiesterase with PAS/P... 349 1e-94 UniRef50_B1M266 Diguanylate cyclase/phosphodiesterase with PAS/P... 347 2e-94 UniRef50_Q1K234 Diguanylate cyclase/phosphodiesterase with PAS/P... 347 3e-94 UniRef50_Q221U3 Diguanylate cyclase/phosphodiesterase with PAS/P... 346 6e-94 UniRef50_Q5P4W8 Putative uncharacterized protein n=2 Tax=Proteob... 346 6e-94 UniRef50_B7V0E6 Motility regulator n=25 Tax=Pseudomonas RepID=B7... 346 9e-94 UniRef50_C4K931 Diguanylate cyclase/phosphodiesterase with PAS/P... 345 1e-93 UniRef50_B6AQA1 Diguanylate cyclase/phosphodiesterase n=2 Tax=Le... 345 1e-93 UniRef50_Q3JBM4 Sensor protein n=4 Tax=Bacteria RepID=Q3JBM4_NITOC 345 1e-93 UniRef50_A1K5S9 GGDEF/EAL-domain containing protein n=1 Tax=Azoa... 345 1e-93 UniRef50_Q21WW2 Diguanylate cyclase/phosphodiesterase with PAS/P... 345 2e-93 UniRef50_B8GNC0 Signal transduction protein containing a membran... 345 2e-93 UniRef50_C0INC4 GGDEF family protein n=1 Tax=uncultured bacteriu... 344 2e-93 UniRef50_Q89HX5 Bll5864 protein n=1 Tax=Bradyrhizobium japonicum... 344 3e-93 UniRef50_Q5P4Q9 Putative uncharacterized protein n=1 Tax=Aromato... 344 3e-93 UniRef50_C4KA21 Diguanylate cyclase/phosphodiesterase with Chase... 344 3e-93 UniRef50_C6NZ79 Diguanylate cyclase/phosphodiesterase with PAS/P... 344 3e-93 UniRef50_C6NZD9 Diguanylate cyclase/phosphodiesterase with PAS/P... 344 4e-93 UniRef50_B9Z1R5 Diguanylate cyclase/phosphodiesterase with PAS/P... 344 4e-93 UniRef50_Q0BFB8 Response regulator receiver modulated diguanylat... 343 6e-93 UniRef50_C1DB08 Predicted signal transduction protein containing... 343 6e-93 UniRef50_A1TI51 Diguanylate cyclase/phosphodiesterase with PAS/P... 343 7e-93 UniRef50_Q5P4K8 Putative sensory box/GGDEF family protein n=1 Ta... 342 8e-93 UniRef50_C9Y8E7 Putative uncharacterized protein n=1 Tax=Curviba... 342 1e-92 UniRef50_Q1K3I2 Diguanylate cyclase/phosphodiesterase with PAS/P... 342 2e-92 UniRef50_Q47H73 Diguanylate cyclase/phosphodiesterase with PAS/P... 341 2e-92 UniRef50_C5T1I4 Diguanylate cyclase/phosphodiesterase with PAS/P... 341 3e-92 UniRef50_Q1JZB1 Diguanylate cyclase/phosphodiesterase with PAS/P... 341 3e-92 UniRef50_B1ZGT4 Diguanylate cyclase/phosphodiesterase n=6 Tax=Me... 340 4e-92 UniRef50_C6WVK9 Diguanylate cyclase/phosphodiesterase with PAS/P... 340 4e-92 UniRef50_Q39R25 Diguanylate cyclase/phosphodiesterase with PAS/P... 340 4e-92 UniRef50_C6ME82 Response regulator receiver modulated diguanylat... 340 5e-92 UniRef50_Q3A2X0 Motility repressor MorA n=1 Tax=Pelobacter carbi... 340 5e-92 UniRef50_Q0EWZ7 Putative uncharacterized protein n=1 Tax=Maripro... 340 5e-92 UniRef50_Q0G5H0 GGDEF family protein n=1 Tax=Fulvimarina pelagi ... 340 6e-92 UniRef50_C7RNY7 Diguanylate cyclase/phosphodiesterase with PAS/P... 339 8e-92 UniRef50_Q3SJL3 Putative diguanylate cyclase/phosphodiesterase (... 339 1e-91 UniRef50_C7CCD7 Putative diguanylate cyclase (GGDEF) /phosphodie... 339 1e-91 UniRef50_C7RJ77 Diguanylate cyclase/phosphodiesterase with PAS/P... 339 1e-91 UniRef50_A1K2X7 GGDEF/EAL/PAS/PAC/GAF-domain containing protein ... 339 1e-91 UniRef50_A0LA87 Diguanylate cyclase/phosphodiesterase with PAS/P... 338 2e-91 UniRef50_D1T5E1 Diguanylate cyclase/phosphodiesterase with PAS/P... 338 2e-91 UniRef50_B7KRA3 Diguanylate cyclase/phosphodiesterase with PAS/P... 338 2e-91 UniRef50_C5V1I4 Diguanylate cyclase/phosphodiesterase with PAS/P... 338 2e-91 UniRef50_Q89WT2 Bll0596 protein n=1 Tax=Bradyrhizobium japonicum... 337 3e-91 UniRef50_A0YLL7 Putative uncharacterized protein n=1 Tax=Lyngbya... 337 3e-91 UniRef50_A1K3A1 GGEF/EAL/PAS/PAC-domain containing protein n=1 T... 337 3e-91 UniRef50_A1ATC4 Periplasmic sensor diguanylate cyclase/phosphodi... 337 3e-91 UniRef50_Q2W154 Putative uncharacterized protein n=2 Tax=Magneto... 337 3e-91 UniRef50_Q3A0D5 Diguanylate cyclase/phosphodiesterase with PAS/P... 337 4e-91 UniRef50_D1C8G6 Diguanylate cyclase/phosphodiesterase with PAS/P... 337 5e-91 UniRef50_Q3A628 Diguanylate cyclase/phosphodiesterase with PAS/P... 337 5e-91 UniRef50_Q21SZ9 Diguanylate cyclase/phosphodiesterase with PAS/P... 336 6e-91 UniRef50_Q5P713 Predicted phospholipase A2 n=1 Tax=Aromatoleum a... 336 6e-91 UniRef50_B3PKJ2 EAL domain protein n=1 Tax=Cellvibrio japonicus ... 336 7e-91 UniRef50_Q0F127 Putative uncharacterized protein n=1 Tax=Maripro... 336 7e-91 UniRef50_Q2W807 Predicted signal transduction protein n=4 Tax=Ma... 336 7e-91 UniRef50_Q47FQ3 Diguanylate cyclase/phosphodiesterase with PAS/P... 336 8e-91 UniRef50_A6VW49 Diguanylate cyclase/phosphodiesterase n=2 Tax=Ma... 336 8e-91 UniRef50_Q1H2G8 Diguanylate cyclase/phosphodiesterase n=1 Tax=Me... 336 9e-91 UniRef50_Q8DL70 Tll0627 protein n=2 Tax=Chroococcales RepID=Q8DL... 335 9e-91 UniRef50_Q4KBF3 Response regulator/GGDEF domain/EAL domain prote... 335 1e-90 UniRef50_B9Z192 Diguanylate cyclase/phosphodiesterase with PAS/P... 335 1e-90 UniRef50_A1KAZ1 Hypothetical signaling protein n=1 Tax=Azoarcus ... 335 1e-90 UniRef50_A1W8G6 Diguanylate cyclase/phosphodiesterase n=7 Tax=Co... 335 1e-90 UniRef50_Q0AIX2 Diguanylate cyclase/phosphodiesterase with PAS/P... 335 1e-90 UniRef50_Q1JZ20 Diguanylate cyclase/phosphodiesterase n=1 Tax=De... 335 1e-90 UniRef50_A0L9T5 Diguanylate cyclase/phosphodiesterase with PAS/P... 335 1e-90 UniRef50_Q2RPL3 Diguanylate cyclase/phosphodiesterase n=1 Tax=Rh... 335 1e-90 UniRef50_A4U1P1 Sensory box/GGDEF family protein n=1 Tax=Magneto... 335 1e-90 UniRef50_B5E7Y8 Response regulator receiver modulated diguanylat... 335 1e-90 UniRef50_A1STH5 Diguanylate cyclase/phosphodiesterase with PAS/P... 335 2e-90 UniRef50_A6U700 Diguanylate cyclase/phosphodiesterase with PAS/P... 335 2e-90 UniRef50_Q3SIW6 Putative diguanylate cyclase/phosphodiesterase (... 335 2e-90 UniRef50_B1XZA8 Diguanylate cyclase/phosphodiesterase with PAS/P... 335 2e-90 UniRef50_Q89VU0 Bll0955 protein n=2 Tax=cellular organisms RepID... 335 2e-90 UniRef50_C1DBY5 Diguanylate cyclase/phosphodiesterase with PAS/P... 335 2e-90 UniRef50_C8SP12 Diguanylate cyclase/phosphodiesterase with PAS/P... 335 2e-90 UniRef50_Q1H367 Diguanylate cyclase/phosphodiesterase (GGDEF & E... 335 2e-90 UniRef50_A0LAF7 Diguanylate cyclase/phosphodiesterase with PAS/P... 334 2e-90 UniRef50_C6E011 Response regulator receiver modulated diguanylat... 334 2e-90 UniRef50_A4U4R0 Sensory box/GGDEF family protein n=3 Tax=Magneto... 334 3e-90 UniRef50_B7GHW2 Multidomain signal transduction protein (GGDEF a... 334 3e-90 UniRef50_Q3A6S1 Diguanylate cyclase/phosphodiesterase with PAS/P... 334 4e-90 UniRef50_Q2SF23 Predicted signal transduction protein containing... 334 4e-90 UniRef50_Q21WZ6 Response regulator receiver modulated diguanylat... 334 4e-90 UniRef50_B1ZFY0 Diguanylate cyclase/phosphodiesterase with PAS/P... 334 4e-90 UniRef50_A8FYM5 Signal transduction protein containing a membran... 333 5e-90 UniRef50_A1ALY4 Diguanylate cyclase/phosphodiesterase n=1 Tax=Pe... 333 6e-90 UniRef50_Q1GXZ6 Diguanylate cyclase/phosphodiesterase (GGDEF & E... 333 7e-90 UniRef50_B9JLU1 Sensory box/GGDEF family protein n=1 Tax=Agrobac... 333 7e-90 UniRef50_B0U8J8 Diguanylate cyclase/phosphodiesterase with PAS/P... 333 7e-90 UniRef50_B8HWB1 Diguanylate cyclase/phosphodiesterase with FHA a... 333 7e-90 UniRef50_Q0KC83 Predicted signal transduction protein containing... 332 9e-90 UniRef50_Q2Y6N3 Response regulator receiver modulated diguanylat... 332 1e-89 UniRef50_C1DJP1 Cyclic di-GMP signal transduction protein n=1 Ta... 332 1e-89 UniRef50_B9YZY8 Diguanylate cyclase/phosphodiesterase with PAS/P... 332 1e-89 UniRef50_C3X2S2 Diguanylate cyclase/phosphodiesterase with PAS/P... 332 1e-89 UniRef50_A0L2H7 Diguanylate cyclase/phosphodiesterase with PAS/P... 332 1e-89 UniRef50_A6WTB4 Diguanylate cyclase/phosphodiesterase with PAS/P... 332 1e-89 UniRef50_A4Y0Z3 Diguanylate cyclase/phosphodiesterase with PAS/P... 332 1e-89 UniRef50_Q1H3Y9 Diguanylate cyclase/phosphodiesterase with PAS/P... 332 1e-89 UniRef50_D2LQL8 Diguanylate cyclase/phosphodiesterase with PAS/P... 332 1e-89 UniRef50_A1TLA7 Diguanylate cyclase/phosphodiesterase with PAS/P... 332 1e-89 UniRef50_Q60A84 Sensory box protein n=1 Tax=Methylococcus capsul... 332 1e-89 UniRef50_B0SHX8 Signal transduction protein n=2 Tax=Leptospira b... 332 1e-89 UniRef50_C4ZNV7 Diguanylate cyclase/phosphodiesterase with PAS/P... 332 1e-89 UniRef50_C0ZBG1 Probable signaling protein YkoW n=1 Tax=Brevibac... 332 1e-89 UniRef50_Q47FU0 Diguanylate cyclase/phosphodiesterase with PAS/P... 332 1e-89 UniRef50_C6XBJ6 Diguanylate cyclase/phosphodiesterase with PAS/P... 332 2e-89 UniRef50_Q1JY96 Diguanylate cyclase/phosphodiesterase with PAS/P... 331 2e-89 UniRef50_Q88LF0 Sensory box protein n=16 Tax=Proteobacteria RepI... 331 2e-89 UniRef50_Q21SH7 Diguanylate cyclase/phosphodiesterase with PAS/P... 331 2e-89 UniRef50_C9Y9D8 Putative uncharacterized protein n=1 Tax=Curviba... 331 2e-89 UniRef50_B1Y2A0 Diguanylate cyclase/phosphodiesterase with PAS/P... 331 2e-89 UniRef50_Q607T2 Sensory box protein/GGDEF domain protein n=2 Tax... 331 2e-89 UniRef50_C1P7J2 Diguanylate cyclase/phosphodiesterase n=1 Tax=Ba... 331 2e-89 UniRef50_Q2RNE1 Diguanylate cyclase/phosphodiesterase with PAS/P... 331 2e-89 UniRef50_C7RS22 Diguanylate cyclase/phosphodiesterase with PAS/P... 331 2e-89 UniRef50_B1XZW3 Diguanylate cyclase/phosphodiesterase with PAS/P... 331 3e-89 UniRef50_A0P1H8 Putative uncharacterized protein n=1 Tax=Labrenz... 331 3e-89 UniRef50_C7RQ11 Response regulator receiver modulated diguanylat... 331 3e-89 UniRef50_Q07PV4 Diguanylate cyclase/phosphodiesterase n=1 Tax=Rh... 331 3e-89 UniRef50_Q1JVV8 Diguanylate cyclase/phosphodiesterase with PAS/P... 331 3e-89 UniRef50_Q0ACK6 Diguanylate cyclase/phosphodiesterase with PAS/P... 330 3e-89 UniRef50_Q47IA0 Diguanylate cyclase/phosphodiesterase with PAS/P... 330 4e-89 UniRef50_Q0F2A0 Diguanylate cyclase/phosphodiesterase (GGDEF & E... 330 4e-89 UniRef50_C4XRM5 Putative signaling protein n=1 Tax=Desulfovibrio... 330 4e-89 UniRef50_C5UZT1 Diguanylate cyclase/phosphodiesterase with PAS/P... 330 4e-89 UniRef50_C6D8Q9 Diguanylate cyclase/phosphodiesterase with PAS/P... 330 4e-89 UniRef50_A0L8C6 Response regulator receiver modulated diguanylat... 330 4e-89 UniRef50_D2L724 Diguanylate cyclase/phosphodiesterase with PAS/P... 330 5e-89 UniRef50_Q2YCL1 Diguanylate cyclase/phosphodiesterase with PAS/P... 330 5e-89 UniRef50_B8GL67 Diguanylate cyclase/phosphodiesterase with PAS/P... 330 5e-89 UniRef50_B2UIB3 Diguanylate cyclase/phosphodiesterase with PAS/P... 330 6e-89 UniRef50_Q0A5U6 Periplasmic sensor diguanylate cyclase/phosphodi... 330 6e-89 UniRef50_C7RK65 Diguanylate cyclase/phosphodiesterase with PAS/P... 330 6e-89 UniRef50_A7BQZ3 Sensory box/GGDEF family protein n=1 Tax=Beggiat... 330 6e-89 UniRef50_Q31GH8 Diguanylate cyclase/phosphodiesterase with PAS/P... 329 7e-89 UniRef50_Q31NI4 Response regulator receiver modulated diguanylat... 329 7e-89 UniRef50_C4L753 Diguanylate cyclase/phosphodiesterase with PAS/P... 329 7e-89 >UniRef50_Q9JMT8 Uncharacterized HTH-type transcriptional regulator yuaB n=2 Tax=Gammaproteobacteria RepID=YUAB_ECOLI Length = 353 Score = 442 bits (1137), Expect = e-122, Method: Composition-based stats. Identities = 353/353 (100%), Positives = 353/353 (100%) Query: 1 MNTIKIKLNLIDYDSIVNIEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIKTVSCQK 60 MNTIKIKLNLIDYDSIVNIEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIKTVSCQK Sbjct: 1 MNTIKIKLNLIDYDSIVNIEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIKTVSCQK 60 Query: 61 MKLYKKLNVKSDLTLWRDVFLRFKAYLQPKNIICDNFNSSVLPVVSSKGESMAHYNIYYQ 120 MKLYKKLNVKSDLTLWRDVFLRFKAYLQPKNIICDNFNSSVLPVVSSKGESMAHYNIYYQ Sbjct: 61 MKLYKKLNVKSDLTLWRDVFLRFKAYLQPKNIICDNFNSSVLPVVSSKGESMAHYNIYYQ 120 Query: 121 PIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINKLFSPIKNN 180 PIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINKLFSPIKNN Sbjct: 121 PIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINKLFSPIKNN 180 Query: 181 LPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSLR 240 LPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSLR Sbjct: 181 LPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSLR 240 Query: 241 RIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSK 300 RIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSK Sbjct: 241 RIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSK 300 Query: 301 QLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLLASLKQV 353 QLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLLASLKQV Sbjct: 301 QLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLLASLKQV 353 >UniRef50_P21514 Cyclic di-GMP phosphodiesterase yahA n=51 Tax=Escherichia RepID=YAHA_ECOLI Length = 362 Score = 393 bits (1010), Expect = e-108, Method: Composition-based stats. Identities = 101/358 (28%), Positives = 190/358 (53%), Gaps = 12/358 (3%) Query: 1 MNTIKIKLNLIDYDSIVNIEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIKTVSCQK 60 MN+ ++ L ++ + V++ P +SE E LL L++G SV EIS+ RNRS KT+S QK Sbjct: 1 MNSCDFRVFLQEFGTTVHLSLPGSVSEKERLLLKLLMQGMSVTEISQYRNRSAKTISHQK 60 Query: 61 MKLYKKLNVKSDLTLWRDVFLRFKAYL------QPKNIICDN-FNSSVLPVVSSKGESMA 113 +L++KL ++SD+T WRD+F ++ + I DN ++ V P S Sbjct: 61 KQLFEKLGIQSDITFWRDIFFQYNPEIISATGSNSHRYINDNHYHHIVTPEAISLALENH 120 Query: 114 HYNIYYQPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINKL 173 + + QP++ A+ G + GC+V + ++ D I + + + + K Sbjct: 121 EFKPWIQPVFCAQTGVLTGCEVLVRWEHPQTGIIPPD-QFIPLAESSGLIVIMTRQLMKQ 179 Query: 174 FSPI----KNNLPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEEL 229 + I K+ LP F I IN++ L E+ECL+ + G ++I+LVL+ + + + Sbjct: 180 TADILMPVKHLLPDNFHIGINVSAGCFLAAGFEKECLNLVNKLGNDKIKLVLELTERNPI 239 Query: 230 YIIRRYQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTD 289 + ++ + +N+ +L+DFG GYA +LQ P ++ + K+ + ++ Sbjct: 240 PVTPEARAIFDSLHQHNITFALDDFGTGYATYRYLQAFPVDFIKIDKSFVQMASVDEISG 299 Query: 290 IIATTIIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLL 347 I I++L+++ + ++A+G+ET++QA MI +GV +L+G S P+P + F+ + + Sbjct: 300 HIVDNIVELARKPGLSIVAEGVETQEQADLMIGKGVHFLQGYLYSPPVPGNKFISEWV 357 >UniRef50_A1K5K2 Conserved hypothetical signaling protein n=2 Tax=Proteobacteria RepID=A1K5K2_AZOSB Length = 1089 Score = 363 bits (933), Expect = 5e-99, Method: Composition-based stats. Identities = 59/331 (17%), Positives = 128/331 (38%), Gaps = 17/331 (5%) Query: 32 LLSQLLKGYSVNEISKRRNRSIK-TVSCQKMKLYKKLNVKSDLTLWRDV------FLRFK 84 +L L + +N SI ++ + + L +D+ ++R F + Sbjct: 758 VLESLAEPMLLNGREIVATGSIGVSLYPRDGEAAATLLKHADVAMYRAKELGRNRFQFYA 817 Query: 85 AYLQPKNIICDNFNSSVLPVVSSKGESMAHYNIYYQPIYNAKNGNIAGCDVTIALKNSDG 144 + + + L + ++YQP + ++G + G + I ++ Sbjct: 818 PEMNERIL-----ERLELENSLRRALENDELELHYQPKVSLRDGRVIGAEALIRWRHPQL 872 Query: 145 SAFALDSDRINYNPNDNKV----SYLFGHINKLFSPIKNNLPHGFFITININPEDILTCD 200 + +D I + ++ H + + + +N++ Sbjct: 873 GMVSP-ADFIPLAEETGLIVPIGEWVVDHACRQLRAWLDAGLPQISVAVNVSARQFQHEQ 931 Query: 201 IERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSLRRIRNNNVYLSLNDFGMGYAE 260 + + +L ++ + + R +LR ++N V +SL+DFG GY Sbjct: 932 LTHVLARALAAHRLPPGQLHVEVTESAVMCEPERTIFTLRELKNIGVRISLDDFGTGYCS 991 Query: 261 LSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSKQLHIDVIADGIETKKQAGYM 320 L++L+ P + + + D+ +++ IA I+ L+ L+ VIA+G+E + Q ++ Sbjct: 992 LNYLKRFPIDSIKIDRCFVTDLATSAEDAAIALMIVSLAHSLNQTVIAEGVENEAQLDFL 1051 Query: 321 IERGVKYLKGIALSSPLPADAFVRKLLASLK 351 G ++G S PLPA F R L A + Sbjct: 1052 RRHGCDEMQGFLFSRPLPAAEFARLLAAGTR 1082 >UniRef50_A6SVJ0 Uncharacterized conserved protein n=4 Tax=Proteobacteria RepID=A6SVJ0_JANMA Length = 956 Score = 357 bits (918), Expect = 2e-97, Method: Composition-based stats. Identities = 55/320 (17%), Positives = 125/320 (39%), Gaps = 17/320 (5%) Query: 38 KGYSVNEISKRRNRSIK-TVSCQKMKLYKKLNVKSDLTLWRDV------FLRFKAYLQPK 90 + ++ + SI V ++L +D+ ++R F + + + + Sbjct: 628 QPLTIEGHEFFISSSIGVAVYPNDGVTPEELIKHADIAMYRAKETGRNNFQFYTSSMNER 687 Query: 91 NIICDNFNSSVLPVVSSKGESMAHYNIYYQPIYNAKNGNIAGCDVTIALKNSDGSAFALD 150 + L + ++YQP + + G I G + I ++ + Sbjct: 688 AL-----ERLRLEGDLRNAMERGEFILHYQPQLDLRTGKIVGVEALIRWQHPELGMI-PP 741 Query: 151 SDRINYNPNDNKV----SYLFGHINKLFSPIKNNLPHGFFITININPEDILTCDIERECL 206 I + +++ + + + +++N++ D+ Sbjct: 742 MRFIGLAEETGLIVPIGAWVIREACRQNKVWQEHGLGSLRMSVNLSARQFAQQDLLESIA 801 Query: 207 HFIKVFGTERIRLVLQFSTKEELYIIRRYQSSLRRIRNNNVYLSLNDFGMGYAELSHLQN 266 ++ L ++ + + + LR ++ V LS++DFG GY+ LS+L+ Sbjct: 802 LALEETQLPPQCLEIELTESLVMADVDHAIGILRELKALGVQLSIDDFGTGYSSLSYLKR 861 Query: 267 IPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSKQLHIDVIADGIETKKQAGYMIERGVK 326 P + + ++ +DI ++ I +II L+ L + VIA+G+ET++Q Y+ + Sbjct: 862 FPIDVLKIDRSFVNDITTDPDDAAIVASIISLAHSLRLTVIAEGVETEEQLAYLQQHDCD 921 Query: 327 YLKGIALSSPLPADAFVRKL 346 ++G S P+ ADA L Sbjct: 922 QIQGYFFSRPITADAMEVML 941 >UniRef50_C5S5K8 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Allochromatium vinosum DSM 180 RepID=C5S5K8_CHRVI Length = 1069 Score = 355 bits (913), Expect = 9e-97, Method: Composition-based stats. Identities = 67/338 (19%), Positives = 140/338 (41%), Gaps = 8/338 (2%) Query: 18 NIEFPCLLSEIEIELLSQLLKGYSV-NEISKRRNRSIKT-VSCQKMKLYKKLNVKSDLTL 75 N++ P + + LLS L + + + N SI + L +D+ + Sbjct: 727 NLQRPEDAAAVAESLLSLLQQPFHLPNGQELYVGASIGISLYPDDGHTVTDLIQHADVAM 786 Query: 76 WRDVFLRFKAY-LQPKNIICDNFNSSVLPVVSSKGESMAHYNIYYQPIYNAKNGNIAGCD 134 ++ Y ++ L + + + ++YQ + ++G + GC+ Sbjct: 787 YQAKEEGRNTYRFYTPSLTQTARERLGLEARLHRALASEEFVLHYQAQIDMRDGRLIGCE 846 Query: 135 VTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINKLFSP----IKNNLPHGFFITIN 190 + ++ A D I + L + + + + +N Sbjct: 847 ALVRWHSATEGLVAPD-RFIPLAEETGLIVPLGEWVLRQACADCQSWRARGLTDLTVAVN 905 Query: 191 INPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSLRRIRNNNVYLS 250 ++ + + D+ ++ G RL L+ + + + LR ++ V LS Sbjct: 906 LSGRQLRSPDLVERVTRVLRETGLPAERLKLELTESMIMDQREQALERLRALKALGVRLS 965 Query: 251 LNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSKQLHIDVIADG 310 ++DFG GY+ L++L+ +P + + + DI +S IA TII +++ L ++VIA+G Sbjct: 966 IDDFGTGYSSLAYLKRLPIDELKIDRDFVRDIPEDSSDMEIAATIIAMARNLRLNVIAEG 1025 Query: 311 IETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLLA 348 +ET +Q ++I +G +G PLPA+AF + + A Sbjct: 1026 VETPEQCDFLIRQGCTAGQGYLFGRPLPAEAFAQVMRA 1063 >UniRef50_B9LZ98 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Geobacter sp. FRC-32 RepID=B9LZ98_GEOSF Length = 912 Score = 355 bits (911), Expect = 2e-96, Method: Composition-based stats. Identities = 66/332 (19%), Positives = 136/332 (40%), Gaps = 7/332 (2%) Query: 25 LSEIEIELLSQLLKGYSVNEISKRRNRSIKT-VSCQKMKLYKKLNVKSDLTLWRDVFLRF 83 L++I ++L+ + K +N+ SI + + + L +DL +++ Sbjct: 578 LNKIAEKILAAISKPLVLNDQEIFITASIGIAIYPEDGTDVQGLLKNADLAMYKAKDQGK 637 Query: 84 KAYLQ-PKNIICDNFNSSVLPVVSSKGESMAHYNIYYQPIYNAKNGNIAGCDVTIALKNS 142 A+ + + +L + + I+YQP + K+G + G + I ++ Sbjct: 638 NAFQYFSREMNVQALEHLILENSLRRALERNEFVIFYQPQMDLKSGRLVGMEALIRWQHP 697 Query: 143 DGSAFALDSDRINYNPNDNKVSYLFGHINK-LFSPIKNNLPHGF---FITININPEDILT 198 D S I + + + + + + GF + +N+ Sbjct: 698 DLGLL-PPSRFIPMAEETGLILPIGEWALQTACAKNRAWMDAGFMPLRVAVNLCGIQFRQ 756 Query: 199 CDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSLRRIRNNNVYLSLNDFGMGY 258 +K G +L L+ + + + L +++ V L+++DFG GY Sbjct: 757 KKFIELIEAVLKKTGLAPSQLELELTESMLMSKAEESTTVLHKLKEMGVSLAIDDFGTGY 816 Query: 259 AELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSKQLHIDVIADGIETKKQAG 318 + LS+L+N P + V + ++ D+ +N I + II ++ L++ V A+G+E Q Sbjct: 817 SSLSYLKNFPINRVKIDRSFIRDVPNNPDDTAIVSAIIAMAHNLNLKVTAEGVENHSQLE 876 Query: 319 YMIERGVKYLKGIALSSPLPADAFVRKLLASL 350 ++ R ++G LSSPLP F R L + Sbjct: 877 FLSTRNCNEIQGYLLSSPLPEAEFTRFLRGGM 908 >UniRef50_A1TX84 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Marinobacter aquaeolei VT8 RepID=A1TX84_MARAV Length = 890 Score = 355 bits (911), Expect = 2e-96, Method: Composition-based stats. Identities = 56/331 (16%), Positives = 135/331 (40%), Gaps = 17/331 (5%) Query: 28 IEIELLSQLLKGYSVNEISKRRNRSIKTVSCQKMKL-YKKLNVKSDLTLWRD------VF 80 + +LL Q + ++N + SI K +L +D ++R F Sbjct: 563 LAQKLLRQFRQKVAINGHEIIASASIGIAMFPKDGDNGDELFRNADTAMYRAKDVGRNGF 622 Query: 81 LRFKAYLQPKNIICDNFNSSVLPVVSSKGESMAHYNIYYQPIYNAKNGNIAGCDVTIALK 140 + A + + L + +++YQP + +G++ + I + Sbjct: 623 QFYSAEMNNRMRERLY-----LEQSLRNAIGLHQLSLWYQPKLDLASGSVKSAEALIRWR 677 Query: 141 NSDGSAFALDSDRINYNPNDNKV----SYLFGHINKLFSPIKNNLPHGFFITININPEDI 196 + + D I + +++ ++ + ++ + INI+ + Sbjct: 678 HPQLGMISP-GDFIPIAEETGLILPIGAWVIEEASRQLAKWRDQENQDIRVAINISAYQL 736 Query: 197 LTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSLRRIRNNNVYLSLNDFGM 256 + + + + G + L ++ + + + + L+ +R + ++L+DFG Sbjct: 737 SHGKLTDQVIQALDSLGLDPQSLTIEVTETAIMPQMDKAVCELQSLREMGIRVALDDFGT 796 Query: 257 GYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSKQLHIDVIADGIETKKQ 316 GY+ L++L+ P + + ++ DI + + I TII+L+ L++ V+A+G+ET+ Q Sbjct: 797 GYSSLTYLKRFPIDILKIDRSFVSDIADDEESGAIVKTIINLAHNLNMTVVAEGVETEAQ 856 Query: 317 AGYMIERGVKYLKGIALSSPLPADAFVRKLL 347 ++ G ++G PLP++ + L Sbjct: 857 LEFLRTNGCDEVQGYYFCKPLPSEECLEFLR 887 >UniRef50_A1ASK8 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Proteobacteria RepID=A1ASK8_PELPD Length = 858 Score = 354 bits (910), Expect = 2e-96, Method: Composition-based stats. Identities = 63/335 (18%), Positives = 137/335 (40%), Gaps = 17/335 (5%) Query: 22 PCLLSEIEIELLSQLLKGYSVNEISKRRNRSIK-TVSCQKMKLYKKLNVKSDLTLWR--- 77 P + + +L +L + + + S+ ++ + L +D+ ++R Sbjct: 367 PDDVGLLASRILHELAVPHRIEGREIVMSASLGISLYPKDSGDGSTLIRNADIAMYRAKQ 426 Query: 78 ---DVFLRFKAYLQPKNIICDNFNSSVLPVVSSKGESMAHYNIYYQPIYNAKNGNIAGCD 134 VF + + + + + + +YYQP + +G I+GC+ Sbjct: 427 EGGGVFSFYAPEMNQRA-----METMEIESALRLALERGEFTLYYQPKVDLASGRISGCE 481 Query: 135 VTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINK-LFSPIKNNLPHGFFIT---IN 190 I + A +D I + + + K ++ G I +N Sbjct: 482 ALIRWLHPRRGVVAP-ADFIPLAEETGLIVPIGTWVLKEACRQVRAWQAEGVPIANVAVN 540 Query: 191 INPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSLRRIRNNNVYLS 250 ++ T D+ + G + L L+ + + + + + + V LS Sbjct: 541 LSARQFRTGDLPGLVREVLGETGLDPHLLELEMTESMVMADHAQVVAVMEELTAIGVRLS 600 Query: 251 LNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSKQLHIDVIADG 310 L+DFG GY+ +HL + P +++ + ++ I ++ + IAT+II ++ ++ + IA+G Sbjct: 601 LDDFGTGYSSFAHLSHFPINHLKIDRSFIKQIVTDPNSATIATSIIAMAHRMRLKAIAEG 660 Query: 311 IETKKQAGYMIERGVKYLKGIALSSPLPADAFVRK 345 +ET+ Q Y+ ++G ++G LS PLPA + Sbjct: 661 VETEAQLAYLRKQGCDEIQGYLLSRPLPASEYAAL 695 >UniRef50_A1WEV3 Diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(S) n=1 Tax=Verminephrobacter eiseniae EF01-2 RepID=A1WEV3_VEREI Length = 981 Score = 354 bits (910), Expect = 2e-96, Method: Composition-based stats. Identities = 60/328 (18%), Positives = 132/328 (40%), Gaps = 17/328 (5%) Query: 32 LLSQLLKGYSVNEISKRRNRSIKTVSCQ-KMKLYKKLNVKSDLTLW------RDVFLRFK 84 LL+ + + + ++ S+ C + + L ++D ++ R+ + F Sbjct: 658 LLTAVAQPFQIDPYELSTTLSVGIAMCPADGESFDTLYQRADAAMYSAKQSGRNRYGFFT 717 Query: 85 AYLQPKNIICDNFNSSVLPVVSSKGESMAHYNIYYQPIYNAKNGNIAGCDVTIALKNSDG 144 A LQ + + + + + ++YQP + G + G + + + + Sbjct: 718 ADLQAR-----TARALQIENALRRALERQQFELHYQPQVSLGTGQVVGAEALLRWHHPEL 772 Query: 145 SAFALDSDRINYNPNDNKVSYLFGHIN-KLFSPIKNNLPHGFF---ITININPEDILTCD 200 A ++ I N ++ L + K L +++N++ Sbjct: 773 GVVAP-AEFIPVAENSGQIVALGEWVLHTAARDAKRWLDMQLPLRAVSVNLSAVQFRHPQ 831 Query: 201 IERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSLRRIRNNNVYLSLNDFGMGYAE 260 + ++ G RL L+ + + + + ++ + V LS++DFG GY+ Sbjct: 832 LPEMVTRCLQQAGLPARRLELELTEGAAVDDPVAALAMMDQLHDRGVRLSMDDFGTGYSS 891 Query: 261 LSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSKQLHIDVIADGIETKKQAGYM 320 LS L+ + + ++ D++ ++ I + II +++ L + A+G+ET Q ++ Sbjct: 892 LSCLKRFQIYKLKIDQSFVRDLDDDANDRAIVSAIIRMAQALGMQTTAEGVETDGQLQFL 951 Query: 321 IERGVKYLKGIALSSPLPADAFVRKLLA 348 +G +G S PLPADAF L A Sbjct: 952 RAQGCDEGQGYLFSRPLPADAFEAYLRA 979 >UniRef50_B0UQT2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Methylobacterium RepID=B0UQT2_METS4 Length = 797 Score = 353 bits (907), Expect = 5e-96, Method: Composition-based stats. Identities = 58/320 (18%), Positives = 124/320 (38%), Gaps = 13/320 (4%) Query: 36 LLKGYSVNEISKRRNRSIKT-VSCQKMKLYKKLNVKSDLTLW------RDVFLRFKAYLQ 88 L + + ++ SI ++ Q ++L +DL L+ R F F+ + Sbjct: 478 LSRPFVIDGHILDIGASIGIALAPQDGDTPEQLLRSADLALYGAKEEGRGRFRMFEGTMN 537 Query: 89 PKNIICDNFNSSVLPVVSSKGESMAHYNIYYQPIYNAKNGNIAGCDVTIALKNSDGSAFA 148 + + L + + + + +Y+QP +A+ G G + I + + + Sbjct: 538 ARMQARRS-----LELDLRRALARQEFELYFQPQVDARTGRFDGAEALIRWHHPERGLVS 592 Query: 149 LDSDRINYNPNDNKVSYLFGHINKLFSPIKNNLPHGFFITININPEDILTCDIERECLHF 208 + I + L + + + +N++P + Sbjct: 593 P-GEFIPLAEETGLIGPLGEWVLRTACAEARRWATPLPVAVNLSPVQFRDPRLAATVRGI 651 Query: 209 IKVFGTERIRLVLQFSTKEELYIIRRYQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIP 268 + G RL ++ + + R + L +R + +S++DFG GY+ LS+L+ P Sbjct: 652 LAETGLPGSRLEIEITEGTLMQDEHRTLAVLTELRGLGIRISMDDFGTGYSSLSYLRRFP 711 Query: 269 FSYVNLHKTMFHDIESNSLTDIIATTIIDLSKQLHIDVIADGIETKKQAGYMIERGVKYL 328 F + + ++ + + I I L + L I A+G+ET +Q+ ++ G L Sbjct: 712 FDKIKIDQSFVRQTPQDRDSVAIVRAIAMLGRSLGIKTTAEGVETDQQSVFIAGEGCDQL 771 Query: 329 KGIALSSPLPADAFVRKLLA 348 +G S P+PA++ A Sbjct: 772 QGYLYSRPVPAESIAELFRA 791 >UniRef50_Q2BMA7 PAS:GGDEF protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BMA7_9GAMM Length = 932 Score = 353 bits (906), Expect = 6e-96, Method: Composition-based stats. Identities = 59/303 (19%), Positives = 127/303 (41%), Gaps = 6/303 (1%) Query: 55 TVSCQKMKLYKKLNVKSDLTLWRDVFLRFKAYLQPKNIICDNFNSSV-LPVVSSKGESMA 113 + + + +L +D ++ + D+ + L ++ + Sbjct: 631 AIYPEDGETPVQLMKNADAAMYHAKASGRNCAQYFNRSLDDSLKERISLENALNQALKLG 690 Query: 114 HYNIYYQPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKV----SYLFGH 169 + +YYQP + K+ I G + I + + + D+ I + S++ Sbjct: 691 QFELYYQPQLDVKSNRIIGAEALIRWNHPEKGMISPDA-FIPLAEESGLIVDIGSWVLHQ 749 Query: 170 INKLFSPIKNNLPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEEL 229 + + + +++N++ + RE I+ +G L L+ + + Sbjct: 750 ASSQLAQWRKQGFDQLSVSVNLSALQVQKESFAREVADVIREYGVPEACLDLELTESMIM 809 Query: 230 YIIRRYQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTD 289 ++L +I N + +S++DFG GY+ LS+L+ P + + ++ DI ++ Sbjct: 810 RNAEETIAALDKIHNLGIQISVDDFGTGYSSLSYLKRFPLDKLKIDRSFVQDITVDTDDA 869 Query: 290 IIATTIIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLLAS 349 +I TII ++ L++ VIA+G+ET Q + + G + +G + PLP + LLAS Sbjct: 870 MICKTIISMAHNLNLQVIAEGVETNAQLELLRDYGCEQYQGYLFAKPLPVEQMTEHLLAS 929 Query: 350 LKQ 352 Q Sbjct: 930 PCQ 932 >UniRef50_A1KA22 GGDEF/EAL/PAS/PAC/GAF-domain containing protein n=1 Tax=Azoarcus sp. BH72 RepID=A1KA22_AZOSB Length = 1006 Score = 353 bits (906), Expect = 7e-96, Method: Composition-based stats. Identities = 54/329 (16%), Positives = 133/329 (40%), Gaps = 17/329 (5%) Query: 32 LLSQLLKGYSVNEISKRRNRSIKT-VSCQKMKLYKKLNVKSDLTLW------RDVFLRFK 84 LL + + ++ SI + + L+ +D ++ R+ F F Sbjct: 672 LLEAVAQPLVLDHQELTVTPSIGIAMYPDDGTDFDTLSRNADAAMYQAKREGRNGFRFFT 731 Query: 85 AYLQPKNIICDNFNSSVLPVVSSKGESMAHYNIYYQPIYNAKNGNIAGCDVTIALKNSDG 144 +Q ++ + +L ++++YQP + +G + G + + + + Sbjct: 732 EAMQARST-----RTLLLANALRHALDRGQFSLHYQPQVSLADGRVVGAEALLRWTHPEF 786 Query: 145 SAFALDSDRINYNPNDNKVSYLFGHINK-LFSPIKNNLPHGF---FITININPEDILTCD 200 + + + ++ ++ + + + + + L G + +N++ + Sbjct: 787 GPVSP-GEFVPIAESNGLIAQIGEWVLREAVAQSRRWLDEGLPPLVMAVNLSAAQFRNPN 845 Query: 201 IERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSLRRIRNNNVYLSLNDFGMGYAE 260 + I+ G ++ L+ + + + + + + +S++DFG GY+ Sbjct: 846 LPELVSQVIEEAGLPPHQVELELTEAVAMDDPQSAVRVMDALFARGIRMSIDDFGTGYSS 905 Query: 261 LSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSKQLHIDVIADGIETKKQAGYM 320 L +L+ + + ++ DI + I + II L+ L + +A+G+ET Q ++ Sbjct: 906 LGYLKRFKVGKLKIDQSFVRDIGDDPDDKAIVSAIIHLAGSLGMLTVAEGVETLDQLDFL 965 Query: 321 IERGVKYLKGIALSSPLPADAFVRKLLAS 349 ++G ++G S PLPA+AFV L S Sbjct: 966 RQQGCDTVQGYYFSRPLPAEAFVGYLQES 994 >UniRef50_A1TLA6 Diguanylate cyclase/phosphodiesterase n=2 Tax=Acidovorax RepID=A1TLA6_ACIAC Length = 1120 Score = 352 bits (905), Expect = 8e-96, Method: Composition-based stats. Identities = 65/332 (19%), Positives = 133/332 (40%), Gaps = 19/332 (5%) Query: 26 SEIEIELLSQLLKGYSVNEISKRRNRSIKTVSCQKMK-LYKKLNVKSDLTLWRDVFL--- 81 ++ +LL+QL + + + SI + +L ++DL +++ Sbjct: 776 EQVAEKLLAQLNRPFEMGAQQHYSTPSIGITLFGDQRRTVDELLKRADLAMYQAKAAGRN 835 Query: 82 ---RFKAYLQPKNIICDNFNSSVLPVVSSKGESMAHYNIYYQPIYNAKNGNIAGCDVTIA 138 F +Q + S L +G + ++ QPI + + G + + Sbjct: 836 TQRFFDPDMQAQVT-----ARSQLESDLRQGIARHELTVHLQPIVDGST-RLCGAEALVR 889 Query: 139 LKNSDGSAFALDSDRINYNPNDNKVSYLFGHINK-----LFSPIKNNLPHGFFITININP 193 ++ + +D I + L + + L + F I +N++ Sbjct: 890 WRHPVKGLISP-ADFIPLAEETGLILPLGRQVLQTACEQLVRWATHPATASFTIAVNVSA 948 Query: 194 EDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSLRRIRNNNVYLSLND 253 D E L + G RL L+ + L + + +++ V +L+D Sbjct: 949 RQFRQPDFVAEVLGTLAGTGANPQRLKLELTESLLLGDVEDTICRMAQLKRVGVGFALDD 1008 Query: 254 FGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSKQLHIDVIADGIET 313 FG GY+ LS+L+ +P V + ++ D+ ++ I TI+ L+K L + V+A+G+ET Sbjct: 1009 FGTGYSSLSYLKRLPLDLVKIDQSFVRDVLTDPNDAAIVRTILALAKSLDLQVVAEGVET 1068 Query: 314 KKQAGYMIERGVKYLKGIALSSPLPADAFVRK 345 Q ++ G + +G P+P +AF R+ Sbjct: 1069 AGQLSFLKLHGCEGFQGYLFGRPVPLEAFERE 1100 >UniRef50_C1D1W4 Putative diguanylate-cyclase n=1 Tax=Deinococcus deserti VCD115 RepID=C1D1W4_DEIDV Length = 856 Score = 352 bits (903), Expect = 2e-95, Method: Composition-based stats. Identities = 64/329 (19%), Positives = 144/329 (43%), Gaps = 14/329 (4%) Query: 28 IEIELLSQLLKGYSVNEISKRRNRSIK-TVSCQKMKLYKKLNVKSDLTLWR-----DVFL 81 + +L++L + + V + SI +VS Q + + L +DL ++R F Sbjct: 525 VARRVLNELTRPFVVQGRAFHLGASIGISVSPQAGRDGQTLLRHADLAMYRAKREKSGFA 584 Query: 82 RFKAYLQPKNIICDNFNSSVLPVVSSKGESMAHYNIYYQPIYNAKNGNIAGCDVTIALKN 141 F+A L + + S + + G A+ ++YQP +G + G + + ++ Sbjct: 585 VFEAQLNQQAQLRLQLASDLREALREPG---ANLELHYQPQVRLHDGQVVGAEALVRWRH 641 Query: 142 SDGSAFALDSDRINYNPNDNKV----SYLFGHINKLFSPIKNNLPHGFFITININPEDIL 197 + + I + + +++ + + +N++ Sbjct: 642 PHLGMVSP-AQFIPVAEDTGMIVPLGTWVMEEACRQAVAWAAAGHGAMRVAVNVSALQFA 700 Query: 198 TCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSLRRIRNNNVYLSLNDFGMG 257 D ++ G E RL ++ + + ++ + R+R V ++++DFG G Sbjct: 701 RPDFVDTVSATLRATGLEAGRLEVELTESAVMEDVKESVERMERLRALGVSVAVDDFGTG 760 Query: 258 YAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSKQLHIDVIADGIETKKQA 317 Y+ LS+LQ +P + + + +T ++ N+ + + I+ L++ L+++ +A+G+ET + Sbjct: 761 YSSLSYLQRLPLNVLKIDRTFIQNLGVNATSRSVVQAIVGLAQHLNLECVAEGVETPDER 820 Query: 318 GYMIERGVKYLKGIALSSPLPADAFVRKL 346 +IE G +Y +G + PLPA A + L Sbjct: 821 EALIEVGCRYAQGFFFAKPLPAPALLEWL 849 >UniRef50_B2JCW5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=7 Tax=Bacteria RepID=B2JCW5_BURP8 Length = 1040 Score = 351 bits (902), Expect = 2e-95, Method: Composition-based stats. Identities = 59/313 (18%), Positives = 127/313 (40%), Gaps = 11/313 (3%) Query: 34 SQLLKGYSVNEISKRRNRSIK-TVSCQKMKLYKKLNVKSDLTLWRD---VFLRFKAYLQP 89 + + + ++ S+ ++ Q + L K+DL ++R F+ Y Sbjct: 709 ASISEPVWLDGTELYVGCSMGASLFPQDGDDAETLMKKADLAMYRAKDMGRNTFQFYQPE 768 Query: 90 KNIICDNFNSSVLPVVSSKGESMAHYNIYYQPIYNAKNGNIAGCDVTIALKNSDGSAFAL 149 N+ + + + + ++YQP + + G + G + + + + Sbjct: 769 MNVSAGARLNLERRLRRA--LRDNEFLLHYQPQVDIETGQVVGMEALVRWHDPEVGLI-P 825 Query: 150 DSDRINYNPNDNKVSYLFGHINK-LFSPIKNNLPHGF---FITININPEDILTCDIEREC 205 S I + L + + K G +++N++ DI + Sbjct: 826 PSQFIPVAEESGLIGPLSEWVLREACRQNKAWQDEGLPPARVSVNLSARQFQQRDIAKLV 885 Query: 206 LHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSLRRIRNNNVYLSLNDFGMGYAELSHLQ 265 + ++ G + L L+ + + S L + + L+++DFG GY+ LS+L+ Sbjct: 886 MQVLEETGLDPQYLELELTESTIMRNAEEAVSMLNELHALGIGLAIDDFGTGYSSLSYLK 945 Query: 266 NIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSKQLHIDVIADGIETKKQAGYMIERGV 325 P + + ++ DI +S + I + II L+ L++ VIA+G+ET Q ++ ER Sbjct: 946 RFPVDRLKIDRSFVSDIGESSDDETITSAIIALAHSLNLQVIAEGVETSTQLDFLKERAC 1005 Query: 326 KYLKGIALSSPLP 338 ++G + PLP Sbjct: 1006 DEMQGYFFAKPLP 1018 >UniRef50_C6MMM5 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Geobacter sp. M18 RepID=C6MMM5_9DELT Length = 1097 Score = 351 bits (902), Expect = 2e-95, Method: Composition-based stats. Identities = 58/329 (17%), Positives = 130/329 (39%), Gaps = 11/329 (3%) Query: 27 EIEIELLSQLLKGYSVNEISKRRNRSIK-TVSCQKMKLYKKLNVKSDLTLWRD---VFLR 82 ++ ++ + + Y + E + S ++ + + L +D+ ++R Sbjct: 628 KVARKIQDAVCRPYQIGEHELVVSCSTGISLYPKDGSDAQVLLKNADVAMYRAKQCGRNN 687 Query: 83 FKAYLQPKNIICDNFNSSVLPVVSSKGESMAHYNIYYQPIYNAKNGNIAGCDVTIALKNS 142 F+ Y N I + + + ++YQP + +G I G + + ++ Sbjct: 688 FQFYTGDLNDIV--LARLTMEKYLRRALERDEFLVHYQPKVDLLSGRITGMEALVRWQSP 745 Query: 143 DGSAFALDSDRINYNPNDNKVSYLFGHINKLFSPIKNNLPHG----FFITININPEDILT 198 + + + I + + + + + +N++P Sbjct: 746 ELGFISP-ASFIPLAEETGLIVAIGEWVLRTACAQNKAWQDDGLPPMVVAVNLSPRQFRQ 804 Query: 199 CDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSLRRIRNNNVYLSLNDFGMGY 258 D+ + G + L+ + + + L ++ V L+++DFG GY Sbjct: 805 EDLADTVHRIAEETGLAPRYIELEVVESLLMDDVDGAVAMLDALKELGVQLTMDDFGTGY 864 Query: 259 AELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSKQLHIDVIADGIETKKQAG 318 + LS+L+ PF + + ++ DI + + I T+I L+ L++ V+A+GIET+ Q G Sbjct: 865 SSLSYLKRFPFDMMKIDQSFVRDITRDPGSAAIVRTVISLAHTLNLRVVAEGIETEGQLG 924 Query: 319 YMIERGVKYLKGIALSSPLPADAFVRKLL 347 Y+ ++G S P+PA F + L Sbjct: 925 YLRGLACDEMQGFYFSRPVPAAEFEQMLR 953 >UniRef50_B8GSM4 Diguanylate cyclase/phosphodiesterase n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GSM4_THISH Length = 648 Score = 351 bits (901), Expect = 3e-95, Method: Composition-based stats. Identities = 62/321 (19%), Positives = 133/321 (41%), Gaps = 7/321 (2%) Query: 32 LLSQLLKGYSVNEISKRRNRSIKT-VSCQKMKLYKKLNVKSDLTLWRDVFLRFK-AYLQP 89 L+ + + + + S+ V L +D ++ Sbjct: 326 LIEVISREHDIEGHQVFLTCSVGISVFPYDGDDADTLIKNADAAMYDAKQRGRNSFQFYT 385 Query: 90 KNIICDNFNSSVLPVVSSKGESMAHYNIYYQPIYNAKNGNIAGCDVTIALKNSDGSAFAL 149 K+I + +L K + + ++YQP + +G + G + + ++ + Sbjct: 386 KDINSQTYRQLILENQLVKALAREEFEVHYQPQVDVISGQVVGAEALVRWRHPEKG-LQP 444 Query: 150 DSDRINYNPNDNKVSYLFGHINKLFSPIKNNLPHGFF----ITININPEDILTCDIEREC 205 ++ I + L + + L + I+IN++ D+ +C Sbjct: 445 PANFIAIAEETGIIEGLGAWVLQKVCQDIRQLTRDGYRIPRISINLSARQFRQSDLVEQC 504 Query: 206 LHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSLRRIRNNNVYLSLNDFGMGYAELSHLQ 265 + I+ G + L+ + + I LR++ V L+++DFG GY+ L++L+ Sbjct: 505 RNTIRSAGIAPAYIELELTESTIMKDIDIAVGMLRQLNALGVRLAIDDFGTGYSSLNNLK 564 Query: 266 NIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSKQLHIDVIADGIETKKQAGYMIERGV 325 + P + + K+ DI + + I T I+ L+K L ++V+A+G+ET++Q G++ G Sbjct: 565 HFPIDTLKIDKSFVRDIPGDRDDEAIVTAIVALAKSLELEVVAEGVETREQLGFLKRLGC 624 Query: 326 KYLKGIALSSPLPADAFVRKL 346 + ++G S PLP + F L Sbjct: 625 EIVQGYFFSRPLPFEGFREYL 645 >UniRef50_B8DLW6 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=5 Tax=Desulfovibrio RepID=B8DLW6_DESVM Length = 739 Score = 350 bits (900), Expect = 4e-95, Method: Composition-based stats. Identities = 59/331 (17%), Positives = 130/331 (39%), Gaps = 8/331 (2%) Query: 23 CLLSEIEIELLSQLLK-GYSVNEISKRRNRSIKT-VSCQKMKLYKKLNVKSDLTLWRDVF 80 L+E E + ++ + SI V+ + + L +++ ++R Sbjct: 390 GELAETESARIQDSFTRPFNAADHELYVMPSIGISVAPEDGRDPATLLKNAEIAMYRAKE 449 Query: 81 LRFKAYLQPKNIICDNF-NSSVLPVVSSKGESMAHYNIYYQPIYNAKNGNIAGCDVTIAL 139 + + + D+ + KG + ++YQP + G + G + + Sbjct: 450 QGGARFRRFTQAMNDDVTRRLAIEKSIRKGLENDEFVVFYQPRVDIVTGQVTGMEALVRW 509 Query: 140 KNSDGSAFALDSDRINYNPNDNKVSYLFGHINKLFSPIKNNLPH---GFFITININPEDI 196 DG+ + I + V L + + I +NI+ Sbjct: 510 ARPDGT-LVPPLEFIPVAEDTGLVVALGERVLRDACIQTRRWTDELGPLRIAVNISARQF 568 Query: 197 LTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSLRRIRNNNVYLSLNDFGM 256 D+ + G +L L+ + + + + L R+ + ++++DFG Sbjct: 569 -QPDLLDRVQAALAESGLPPSQLELEITETTMMRDLPTSVAILERLAAQGISIAIDDFGT 627 Query: 257 GYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSKQLHIDVIADGIETKKQ 316 G++ L +L+N P + + ++ D+ + I +TI+ + + L ++V+A+G+ET Q Sbjct: 628 GHSSLYYLKNFPIDTIKIDRSFVRDVPGDEGDATIVSTIVTMGRNLSLNVVAEGVETDDQ 687 Query: 317 AGYMIERGVKYLKGIALSSPLPADAFVRKLL 347 G++ G + ++G S PLPAD F + Sbjct: 688 LGFLRAHGCREVQGYYYSKPLPADGFADWMR 718 >UniRef50_Q20JY5 Sensory box/GGDEF family protein n=1 Tax=uncultured bacterium RepID=Q20JY5_9BACT Length = 874 Score = 350 bits (899), Expect = 4e-95, Method: Composition-based stats. Identities = 57/355 (16%), Positives = 133/355 (37%), Gaps = 18/355 (5%) Query: 6 IKLNLIDYDSIVN-IEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIKT-VSCQKMKL 63 +L ++ I+N + ++++ ++ + + + + SI + Sbjct: 524 FRLGGDEFTIILNDLTDDTDMAKVAQKIRKAIARPCRIKDHELYITVSIGISIYPDDGDD 583 Query: 64 YKKLNVKSDLTLWRDVFLRFKAYLQPKNIICDNFNSSVLPVV-----SSKGESMAHYNIY 118 + L +D+ ++ K Q + N L + IY Sbjct: 584 VETLVKNADIAMYAA-----KEENQGYRFFIEEMNRKTLERMMLENNLRNALQHDQLIIY 638 Query: 119 YQPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINKLFSPIK 178 YQP+ + I G + + + + + S I + + + + Sbjct: 639 YQPLVD-STNQIVGMEALLRWHHPELGLISP-SQFIPLAEETGLIVPIGKWVLRCACQQA 696 Query: 179 NNLPH----GFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRR 234 F++ +N++ D+ ++ L L+ + + + Sbjct: 697 RKWHEMGYTRFYVAVNLSVRQFREPDLVETIEQILEATDLPPDCLKLEVTESGIMEHPEQ 756 Query: 235 YQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATT 294 + ++ +R ++ S++DFG GY+ LS+L+ P + + ++ D +N I T Sbjct: 757 AIAKMKMLRAKGIHFSIDDFGTGYSSLSYLKRFPIDTLKIDRSFVIDSTTNKDDQEIIKT 816 Query: 295 IIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLLAS 349 II +++ L +D +A+G+E K+Q ++I G ++G P+PA+ F L Sbjct: 817 IIAMARNLGMDTVAEGVEAKEQQDFLIHHGCHMMQGYYFGRPMPAEKFEDMLQTR 871 >UniRef50_B9Z8G8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z8G8_9NEIS Length = 887 Score = 350 bits (899), Expect = 4e-95, Method: Composition-based stats. Identities = 66/329 (20%), Positives = 136/329 (41%), Gaps = 7/329 (2%) Query: 25 LSEIEIELLSQLLKGYSV-NEISKRRNRSIK-TVSCQKMKLYKKLNVKSDLTLWRDVFLR 82 ++ I LL + + + SI ++ + +L +D ++ Sbjct: 550 VASIAHALLKVVDQPFGFSGGGEAYVGASIGISLYPGDGRSASELIRNADAAMYLAKAQG 609 Query: 83 FKAYLQPKNIICDNFNSSV-LPVVSSKGESMAHYNIYYQPIYNAKNGNIAGCDVTIALKN 141 AY + N + + + + ++YQP+ +G + G +V + + Sbjct: 610 SNAYRFYTESLTRAANERLSMETSLRRALRCEEFVLHYQPLVELASGRVLGAEVLVRWQ- 668 Query: 142 SDGSAFALDSDRINYNPNDNKVSYLFGHIN-KLFSPIKNNLPHGFFI--TININPEDILT 198 G A S I + L + + K L G + +N++P L Sbjct: 669 PPGEALVPPSRFIPLAEETGLIVPLGDWVLHEACRQGKAWLDAGLPLLLAVNLSPRQFLR 728 Query: 199 CDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSLRRIRNNNVYLSLNDFGMGY 258 D+ + ++ G +L L+ + + + +L ++ V L+++DFG GY Sbjct: 729 HDLVGQVRKALQGSGLPPAQLELELTEGALMEQAEQAVKTLHALKRLGVSLAIDDFGTGY 788 Query: 259 AELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSKQLHIDVIADGIETKKQAG 318 + L++L+ P + + ++ D+ +S I TTII + + L ++ +A+G+ET +Q Sbjct: 789 SSLAYLKRFPLDKLKIDRSFVRDLPRDSSDAEIVTTIIAMVRNLKLEALAEGVETPQQLA 848 Query: 319 YMIERGVKYLKGIALSSPLPADAFVRKLL 347 ++ + G +G S PLPA+AF R L Sbjct: 849 FLRQLGCDSGQGYLFSPPLPAEAFERWLR 877 >UniRef50_B3PCE8 Sensory box/GGDEF family protein n=2 Tax=Gammaproteobacteria RepID=B3PCE8_CELJU Length = 772 Score = 350 bits (899), Expect = 4e-95, Method: Composition-based stats. Identities = 59/321 (18%), Positives = 131/321 (40%), Gaps = 7/321 (2%) Query: 32 LLSQLLKGYSVNEISKRRNRSIK-TVSCQKMKLYKKLNVKSDLTLWRDVFLRFK-AYLQP 89 LL+ L + ++ S SI ++ + +L +D+ +++ Sbjct: 431 LLATLSRPLDISGHSISATVSIGVSIFPEDGADTDELLKNADIAMYKAKEAGKNNCQFYT 490 Query: 90 KNIICDNFNSSVLPVVSSKGESMAHYNIYYQPIYNAKNGNIAGCDVTIALKNSDGSAFAL 149 K + N +L + +YYQP + K G++ G + + ++ + + Sbjct: 491 KGMNATAVNYLLLENDLRRAIEQNQLALYYQPQIDLKTGDMTGVEALVRWQHPERGLVSP 550 Query: 150 DSDRINYNPNDNKVSYLFGHINKLFSPIKN-NLPHGF---FITININPEDILTCDIEREC 205 + I + + + + K L G + +N++P + + Sbjct: 551 -AHFIPLAEETGLIVPIGEWVLREACKQKKIWLDTGKNVGKVAVNLSPRQFRQKNFPGKV 609 Query: 206 LHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSLRRIRNNNVYLSLNDFGMGYAELSHLQ 265 ++ G E L L+ + + + L ++ +L+++DFG GY+ L++LQ Sbjct: 610 EAILQETGLEAKYLELEITESCAMEHAGETINQLNQLNQMGTFLAIDDFGTGYSSLAYLQ 669 Query: 266 NIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSKQLHIDVIADGIETKKQAGYMIERGV 325 P + + ++ HDI ++ IA TII L+ + + V+A+G+ET+ QA ++ +G Sbjct: 670 RFPIQKLKIDRSFIHDIHDDANDAAIAKTIIGLAHNMQLRVVAEGVETESQAEWLRAKGC 729 Query: 326 KYLKGIALSSPLPADAFVRKL 346 ++G + P+ A Sbjct: 730 DQVQGFLYAKPMTAKQLESHF 750 >UniRef50_C6XAD3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6XAD3_METSD Length = 751 Score = 350 bits (899), Expect = 5e-95, Method: Composition-based stats. Identities = 68/326 (20%), Positives = 135/326 (41%), Gaps = 7/326 (2%) Query: 27 EIEIELLSQLLKGYSVNEISKRRNRSIKT-VSCQKMKLYKKLNVKSDLTLWRDVFLRFKA 85 E+ +LL+ Y + + SI V + + L +D ++ L Sbjct: 420 EVAEKLLAAATVPYEIGSHEITVSASIGIAVFPDDGENGELLTKNADAAMYHAKSLGRNN 479 Query: 86 YLQP-KNIICDNFNSSVLPVVSSKGESMAHYNIYYQPIYNAKNGNIAGCDVTIALKNSDG 144 Y + + + L + + +YYQP + + G + G + I ++ Sbjct: 480 YQFFTRAMNERVMEIAELESKLRRAVERNEFVLYYQPKIDIRTGQVVGAEALIRWQHPSW 539 Query: 145 SAFALDSDRINYNPNDNKVS----YLFGHINKLFSPIKNNLPHGFFITININPEDILTCD 200 A D I + + ++ + + + +N++ + + Sbjct: 540 GLVAPD-RFIPIAEDSGLIRPIGLWVMREACRQNQEWQAAGLARIPVAVNLSTVQLRQHN 598 Query: 201 IERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSLRRIRNNNVYLSLNDFGMGYAE 260 +E + + G E L L+ + ++ + L ++R+ V L+L+DFG GY+ Sbjct: 599 FLQEVSEILLMSGLEPDYLELEVTESVAIHAETEVINWLHKLRSMGVKLALDDFGTGYSS 658 Query: 261 LSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSKQLHIDVIADGIETKKQAGYM 320 LS+L+ +P + V + K+ DIE++ I T II +S L ++VIA+G+E Q ++ Sbjct: 659 LSYLKRLPINNVKIDKSFIRDIETDPDDATIITAIIRMSHGLRLNVIAEGVENINQLEFL 718 Query: 321 IERGVKYLKGIALSSPLPADAFVRKL 346 + G ++G S P+PAD F L Sbjct: 719 KKEGCDQMQGFIASRPVPADEFALLL 744 >UniRef50_C5V3L4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V3L4_9PROT Length = 900 Score = 350 bits (898), Expect = 6e-95, Method: Composition-based stats. Identities = 64/335 (19%), Positives = 135/335 (40%), Gaps = 19/335 (5%) Query: 30 IELLSQLLKGYSVNEISKRRNRSIKTVSCQKMKLY-KKLNVKSDLTLW------RDVFLR 82 ++ + L + Y + SI + +L ++D+ ++ R+V Sbjct: 566 EQIFAALRQPYLIGTHEYHGTSSIGATLFNDKQQSIDELMKQADIAMYQAKKEGRNVLRF 625 Query: 83 FKAYLQPKNIICDNFNSSVLPVVSSKGESMAHYNIYYQPIYNAKNGNIAGCDVTIALKNS 142 F +Q + L K + ++YQ + ++ + G + I + Sbjct: 626 FDPQMQE-----TIAKRTALEGDLRKAIENHQFQLHYQIQVD-ESRHPFGAEALIRWFHP 679 Query: 143 DGSAFALDSDRINYNPNDNKVSYLFGHINKLFSPIKNNLPH-----GFFITININPEDIL 197 + + D I + + + + + H GF +++N++ + Sbjct: 680 EHGMVSPD-QFIPLAEESDLILPIGYWVLETACARIQRWQHDAKTSGFVLSVNVSAKQFR 738 Query: 198 TCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSLRRIRNNNVYLSLNDFGMG 257 D + I+ + L L+ + L I +++ ++ V SL+DFG G Sbjct: 739 QTDFVNQVQSLIQQYEINPSLLKLELTESMLLDNIEDTIATMSALKELGVKFSLDDFGTG 798 Query: 258 YAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSKQLHIDVIADGIETKKQA 317 Y+ L +L+ +P + + ++ DI ++ I TII ++ L +DVIA+G+ET++Q Sbjct: 799 YSSLQYLKRLPLDQLKIDQSFVRDIAVDASDRAIVRTIIAMAHSLDLDVIAEGVETEEQQ 858 Query: 318 GYMIERGVKYLKGIALSSPLPADAFVRKLLASLKQ 352 ++ +G K +G P+P + F L SL Q Sbjct: 859 KHLSSKGCKNFQGYLFGKPVPIEQFETSLRKSLFQ 893 >UniRef50_B3EBJ5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Proteobacteria RepID=B3EBJ5_GEOLS Length = 965 Score = 350 bits (898), Expect = 6e-95, Method: Composition-based stats. Identities = 57/323 (17%), Positives = 134/323 (41%), Gaps = 7/323 (2%) Query: 30 IELLSQLLKGYSVNEISKRRNRSIK-TVSCQKMKLYKKLNVKSDLTLWRDVFLRFK-AYL 87 +++L QL + Y +++ + SI ++ + + ++L +D+ +++ + Sbjct: 628 MKILEQLCEPYQIDDHEVYTSSSIGISLFPRDGRDAEELLKNADMAMYQAKEAGRNTCHF 687 Query: 88 QPKNIICDNFNSSVLPVVSSKGESMAHYNIYYQPIYNAKNGNIAGCDVTIALKNSDGSAF 147 + +L + + + YQP ++G+IAG + + ++ D Sbjct: 688 FSPELNMRATERLLLESTMRRALEREEFFLVYQPQMELRSGHIAGIEALLRWRHPDLG-V 746 Query: 148 ALDSDRINYNPNDNKVSYLFGHI----NKLFSPIKNNLPHGFFITININPEDILTCDIER 203 ++ I + L + + + + +N++ ++ Sbjct: 747 VPPNNFIPIAEETGLIVPLGEWVLAEACRQAVRWQQEGQPPLRMAVNVSARQFRQRNLGL 806 Query: 204 ECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSLRRIRNNNVYLSLNDFGMGYAELSH 263 + G + L L+ + + +LR+++ + LS++DFG GY+ LSH Sbjct: 807 RIEKILMETGLDPALLELELTESAVMENPEEAILTLRQLKKMGITLSIDDFGTGYSSLSH 866 Query: 264 LQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSKQLHIDVIADGIETKKQAGYMIER 323 L++ P + + ++ + + IA II L+ + + V+A+GIE +Q +M +R Sbjct: 867 LKHFPIDRLKIDRSFVKHVTRDHNDATIAEAIIALAHSMKLTVVAEGIEHSEQMEFMHQR 926 Query: 324 GVKYLKGIALSSPLPADAFVRKL 346 ++G LS P+ A+ F L Sbjct: 927 HCDTMQGYYLSRPVTAEEFGTFL 949 >UniRef50_A4J477 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=2 Tax=Firmicutes RepID=A4J477_DESRM Length = 947 Score = 349 bits (897), Expect = 8e-95, Method: Composition-based stats. Identities = 58/312 (18%), Positives = 127/312 (40%), Gaps = 7/312 (2%) Query: 43 NEISKRRNRSIKTVSCQKMKLYKKLNVKSDLTLWRDVFLRFKAYL-QPKNIICDNFNSSV 101 +E + I + + L +D +++ + Y + Sbjct: 632 HEFHITTSIGI-ALYPDDGTDAESLLKNADAAMYQAKEMGRNNYQFYTPTMNAQTLRRFE 690 Query: 102 LPVVSSKGESMAHYNIYYQPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDN 161 L + + IYYQP G I G + I ++ + ++ I Sbjct: 691 LENNLRRALDRKEFVIYYQPQVEIHTGKIVGVEALIRWQHPQRGMISP-AEFIPMAEETG 749 Query: 162 KVSYLFGHI-NKLFSPIKNNLPHGF---FITININPEDILTCDIERECLHFIKVFGTERI 217 + + I + + K GF +T+N++ L + + + ++ G Sbjct: 750 LIIPIGEWILRRACAQNKAWQDRGFSPMRVTVNLSARQFLQPHLPQYISNVLEDTGLGPQ 809 Query: 218 RLVLQFSTKEELYIIRRYQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKT 277 L L+ + + + + +L +R + L+++DFG GY+ L++L+ +P + + ++ Sbjct: 810 WLELEITESLAMKDVAFTEKTLIELRKMGITLAIDDFGTGYSSLNYLKRLPIDILKIDRS 869 Query: 278 MFHDIESNSLTDIIATTIIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPL 337 HD+ + S I + II L L + V+A+G+ETK+Q ++ ++ ++G + PL Sbjct: 870 FIHDLNTESDDVAIISAIITLGHNLKMKVVAEGVETKEQLMFLRQQQCDLMQGYLFTKPL 929 Query: 338 PADAFVRKLLAS 349 P +K L++ Sbjct: 930 PVRELEQKYLSN 941 >UniRef50_Q07P60 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=12 Tax=Rhizobiales RepID=Q07P60_RHOP5 Length = 834 Score = 349 bits (897), Expect = 8e-95, Method: Composition-based stats. Identities = 63/333 (18%), Positives = 136/333 (40%), Gaps = 3/333 (0%) Query: 16 IVNIEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIKT-VSCQKMKLYKKLNVKSDLT 74 +V++ P S+ ++ +L Y V+ + SI +S + L +D+ Sbjct: 492 LVSVVSPNEASDFAARVIERLSVPYDVDGLEVVIGASIGIALSPGDGDNGEDLLRNADMA 551 Query: 75 LWRDVFLRF-KAYLQPKNIICDNFNSSVLPVVSSKGESMAHYNIYYQPIYNAKNGNIAGC 133 L+R + K + + + + + +YYQP+ + +AG Sbjct: 552 LYRAKESGGGNHHFFEKEMDRQAQKRRDMEIDLRYAFAKGQFELYYQPLVDVARDRVAGF 611 Query: 134 DVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINKLFSPIKNNLPHGFFITININP 193 + + ++ + + +D I + + L + + P I +N++P Sbjct: 612 EALLRWRHPERGMISP-ADFIPVAEDIGLIVGLGEWVLRQACAEAATWPSEIKIAVNLSP 670 Query: 194 EDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSLRRIRNNNVYLSLND 253 + ++ + + + G RL L+ + L ++L ++R+ V +S++D Sbjct: 671 VQFRSRNLVQAVIGALAQSGLSPRRLELEITESVFLAETEANLATLHQMRDLGVRISMDD 730 Query: 254 FGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSKQLHIDVIADGIET 313 FG GY+ LS+L++ PF + + ++ D+ I I L + L+I A+G+ET Sbjct: 731 FGTGYSSLSYLRSFPFDKIKIDRSFVQDLAQRPDCLAIVRAIAGLGRSLNITTTAEGVET 790 Query: 314 KKQAGYMIERGVKYLKGIALSSPLPADAFVRKL 346 + Q ++ E G ++G S PA + Sbjct: 791 QAQLDWLREEGCNEVQGFLFSPARPAGEIAALI 823 >UniRef50_B7KTV8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Methylobacterium extorquens group RepID=B7KTV8_METC4 Length = 772 Score = 349 bits (896), Expect = 8e-95, Method: Composition-based stats. Identities = 65/333 (19%), Positives = 142/333 (42%), Gaps = 9/333 (2%) Query: 16 IVNIEF--PCLLSEIEIELLSQLLKGYSVNEISKRRNRSIKTV-SCQKMKLYKKLNVKSD 72 ++N+ F P + ++ L+ L ++ S SI + + ++L +D Sbjct: 427 VLNVAFTSPSEVEDLARRLIESLSTPVPLDNESVTIGVSIGIAFAPTDGRTAEELLKNAD 486 Query: 73 LTLWRDVFL---RFKAYLQPKNIICDNFNSSVLPVVSSKGESMAHYNIYYQPIYNAKNGN 129 L+R F+ + + V + + YQP ++ G Sbjct: 487 AALYRAKTAGRGTFRFFEPEMDRKLQARQRLVQD--LRNALTRDELRLDYQPFVKSETGV 544 Query: 130 IAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINKLFSPIKNNLPHGFFITI 189 I+GC+ + ++ + + + I + + + + + P + I++ Sbjct: 545 ISGCEALLRWRHPERGMISP-VEFIPLAEESGLIVPIGMWVIQQACREAASWPSTYRISV 603 Query: 190 NINPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSLRRIRNNNVYL 249 N++P + D+ + L + G RL ++ + + LR+IR+ V + Sbjct: 604 NVSPVQFRSRDLPQVILAALTSSGLAPARLEVEVTEAVLIDDADTALEILRQIRSLGVRV 663 Query: 250 SLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSKQLHIDVIAD 309 +L+DFG GY+ LS+L+ PF + + ++ ++++ + +I I D+++ L + V A+ Sbjct: 664 ALDDFGTGYSSLSYLRRFPFDKIKIDRSFVQELDTRHDSQVIVQAIRDMAQGLGMTVTAE 723 Query: 310 GIETKKQAGYMIERGVKYLKGIALSSPLPADAF 342 G+ET QA + + G + L+G S P PA+ Sbjct: 724 GVETDDQAKRLRQTGCEELQGFLYSRPRPANEL 756 >UniRef50_A4G4R7 Putative uncharacterized protein n=1 Tax=Herminiimonas arsenicoxydans RepID=A4G4R7_HERAR Length = 859 Score = 349 bits (896), Expect = 8e-95, Method: Composition-based stats. Identities = 58/333 (17%), Positives = 132/333 (39%), Gaps = 9/333 (2%) Query: 24 LLSEIEIELLSQLLKGYSVNEISKRRNRSIKT-VSCQKMKLYKKLNVKSDLTLWRDVFLR 82 +I EL+ + + Y + SI V ++ L +D+ ++R Sbjct: 526 SAKKIAQELMRAINEPYRIGSHELNVMASIGIAVYPADGMDFETLCKNADVAMYRAKQEG 585 Query: 83 FKAYLQPKNIICDNFNSSVLPV--VSSKGESMAHYNIYYQPIYNAKNGNIAGCDVTIALK 140 AY + +++ L V + + +++YQP + +G++ G + + Sbjct: 586 RNAY-RSFTQEMQAYSTRYLQVLNALRQAIAQEQLHVHYQPQISLISGDVIGAEALLRWH 644 Query: 141 NSDGSAFALDSDRINYNPNDNKVSYLFGHINK----LFSPIKNNLPHGFFITININPEDI 196 + + + ++ I + + + + I +N++ Sbjct: 645 HPELGNISP-AEFIPIAEESGLILQIGEWVLRVAVAQAKKWHQLGLDKLIIAVNLSAVQF 703 Query: 197 LTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSLRRIRNNNVYLSLNDFGM 256 + + +K L L+ + ++ + + + + V +S++DFG Sbjct: 704 RHAGLPNLVMQILKEEDFPPQYLELELTEGVAMHDPQGAIAMMNSLHERGVRMSIDDFGT 763 Query: 257 GYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSKQLHIDVIADGIETKKQ 316 GY+ LS+L+ + + ++ DI +++ I + II ++K L + IA+G+ET +Q Sbjct: 764 GYSSLSYLKQFKAYKLKIDQSFVRDISTDAEDKAIVSAIIGMAKNLGLQTIAEGVETAEQ 823 Query: 317 AGYMIERGVKYLKGIALSSPLPADAFVRKLLAS 349 ++ E G +G S PLPA F +L + Sbjct: 824 QAFLREEGCHEAQGYHYSKPLPAADFETFILGA 856 >UniRef50_B8GMU1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GMU1_THISH Length = 862 Score = 349 bits (896), Expect = 9e-95, Method: Composition-based stats. Identities = 61/340 (17%), Positives = 142/340 (41%), Gaps = 17/340 (5%) Query: 18 NIEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIK-TVSCQKMKLYKKLNVKSDLTLW 76 NIE S ++ + + + + E N SI ++ + + + L +D ++ Sbjct: 528 NIEHSEQASLSAERVVQAMRRPFRLGEHEHFCNVSIGISLYPEDDEHPEDLVRHADSAMY 587 Query: 77 RD------VFLRFKAYLQPKNIICDNFNSSVLPVVSSKGESMAHYNIYYQPIYNAKNGNI 130 + + + + +L + + + ++YQP + ++G I Sbjct: 588 LAKAQGGAGYRFYTPDMNTRA-----MERLLLQNQLHQALELGQFQVHYQPQMDLRSGRI 642 Query: 131 AGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINKLFSP----IKNNLPHGFF 186 G + + ++ + ++ I + + L + + + ++ Sbjct: 643 CGVEALVRWQHPERG-LVPPAEFIPMAEDTGLIEPLGEWVLRTAAREVRGWQDRGLPALN 701 Query: 187 ITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSLRRIRNNN 246 +++N++P D+ + G E RL L+ + + + + +L RI Sbjct: 702 LSVNLSPRQFRHPDLPGMVERVLAESGLEAERLELEITERLIIVDLEHTVDTLSRIARLG 761 Query: 247 VYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSKQLHIDV 306 V +S++DFG G++ L++L+ +P + + + I +S IA +I L + L + V Sbjct: 762 VRVSIDDFGTGHSSLAYLKRLPVHALKIDREFVDGIGQDSDDAAIAEAVIALGRTLRLQV 821 Query: 307 IADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKL 346 IA+G+ET++QA ++ E G ++G ++ P+PA L Sbjct: 822 IAEGVETREQASFLREHGCDAVQGFFIARPMPAGELTGWL 861 >UniRef50_Q47ED8 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q47ED8_DECAR Length = 827 Score = 349 bits (896), Expect = 1e-94, Method: Composition-based stats. Identities = 59/332 (17%), Positives = 126/332 (37%), Gaps = 19/332 (5%) Query: 28 IEIELLSQLLKGYSVNEISKRRNRSIKTVSCQKMKLYKKLNVKSDLTLWRDVFLRFKAYL 87 I +LL+ + + + SI +Y + +D + + A Sbjct: 493 IAEKLLAAFAEPCLIAGNELHVSLSIGI------SIYPDDGMDADTVMKNADTAMYHAKA 546 Query: 88 QPKN---IICDNFNSSVLPVV-----SSKGESMAHYNIYYQPIYNAKNGNIAGCDVTIAL 139 +N N+ + + + + +YYQP + +G + G + I Sbjct: 547 NGRNNYQFFTTEMNTRAVRRLFIEGNLRRALRQGEFMLYYQPKIDLASGMMIGSEALIRW 606 Query: 140 KNSDGSAFALDSDRINYNPNDNKV----SYLFGHINKLFSPIKNNLPHGFFITININPED 195 ++ + + + S++ + + + +++NI+ + Sbjct: 607 QDPEHG-LVYPKQFVPIAEESGLIVPIGSWVLREACRQVRAWQESGLVAVPVSVNISAVE 665 Query: 196 ILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSLRRIRNNNVYLSLNDFG 255 D +K G L L+ + ++ + L ++ + L+++DFG Sbjct: 666 FRHKDFLEGVALILKETGMLPSYLELELTESILMHDAESSATVLEALKTMGMQLAIDDFG 725 Query: 256 MGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSKQLHIDVIADGIETKK 315 GY+ LS+L+ P + + + ++ HDI + I +I + K L V+A+G+ET++ Sbjct: 726 TGYSSLSYLKRFPINTLKIDQSFVHDIAIDPDDASIVGAMIGMGKNLKQRVVAEGVETEE 785 Query: 316 QAGYMIERGVKYLKGIALSSPLPADAFVRKLL 347 Q ++ +G PLPAD F R LL Sbjct: 786 QLAFLRTLHCDEGQGFLFGRPLPADEFARLLL 817 >UniRef50_B3PHI4 Sensory box/GGDEF family protein n=1 Tax=Cellvibrio japonicus Ueda107 RepID=B3PHI4_CELJU Length = 595 Score = 349 bits (895), Expect = 1e-94, Method: Composition-based stats. Identities = 61/329 (18%), Positives = 134/329 (40%), Gaps = 7/329 (2%) Query: 28 IEIELLSQLLKGYSVNEISKRRNRSIKT-VSCQKMKLYKKLNVKSDLTLWRDVFLRFKAY 86 + ++LS ++ V+ R SI + + + + L +D+ ++R Y Sbjct: 253 VAQKILSAAIQPLDVHGQECRVTASIGICLYPEDAEDEQALMKNADIAMYRAKEEGKNNY 312 Query: 87 L-QPKNIICDNFNSSVLPVVSSKGESMAHYNIYYQPIYNAKNGNIAGCDVTIALKNSDGS 145 ++ + +L K + ++YQ N K G IAG + + ++ + Sbjct: 313 QFYSPDLKVRSLERLMLENNLRKALERHEFFLHYQAKRNLKTGKIAGVEALVRWQHPELG 372 Query: 146 AFALDSDRINYNPNDNKVSYLFGHINKLFSP----IKNNLPHGFFITININPEDILTCDI 201 + + I + +L + + + I +N++ ++ Sbjct: 373 TISP-AHFIPLAEETGLIVHLGRWVLRAACTQGVIWQQQGLPPICIAVNLSARQFFDDNL 431 Query: 202 ERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSLRRIRNNNVYLSLNDFGMGYAEL 261 + + ++ G L ++ + + R L I+ V L+++DFG+GY+ L Sbjct: 432 INDIANALRESGLAPELLEMEITEGMIMQDAERAIRILTGIKALGVRLAIDDFGVGYSSL 491 Query: 262 SHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSKQLHIDVIADGIETKKQAGYMI 321 +H++ P + + + DI +N I II + K L + VIA+G+ET++Q ++ Sbjct: 492 AHIKRFPIDTLKVDSSFIRDIPANREDRAITEAIIAMGKTLSLTVIAEGVETQEQENFLR 551 Query: 322 ERGVKYLKGIALSSPLPADAFVRKLLASL 350 + +G S P+ + F R +LA + Sbjct: 552 DSACDQTQGYYFSKPVSPEEFTRFMLAHM 580 >UniRef50_C6X6V4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6X6V4_METSD Length = 1126 Score = 349 bits (895), Expect = 1e-94, Method: Composition-based stats. Identities = 55/330 (16%), Positives = 127/330 (38%), Gaps = 11/330 (3%) Query: 25 LSEIEIELLSQLLKGYSVNEISKRRNRSIK-TVSCQKMKLYKKLNVKSDLTLWR---DVF 80 L+ I ++++ L + + + + SI +V L +D ++R Sbjct: 784 LNTIARKIMATLAQPFILVGRELFISASIGISVYPDDGLDTASLLKHADAAMYRAKESGK 843 Query: 81 LRFKAYLQPKNIICDNFNSSVLPVVSSKGESMAHYNIYYQPIYNAKNGNIAGCDVTIALK 140 F+ Y N L + + ++YQP + ++ I G + + + Sbjct: 844 NTFRFYAAEANTNSVEL--LTLENNLRRAVERNEFVLHYQPKVDLRSQKIIGAEAVVRWQ 901 Query: 141 NSDGSAFALDSDRINYNPNDNKVSYLFGHI----NKLFSPIKNNLPHGFFITININPEDI 196 + + + I + + I + + + +N++ Sbjct: 902 HPELGMLSP-MQFIPLAEETGLIIDIGAWIMRESCRQAVEWQQLTGQNVRVAVNLSARQF 960 Query: 197 LTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSLRRIRNNNVYLSLNDFGM 256 + + + G L L+ + ++ R + L+ + ++ ++DFG Sbjct: 961 RDETLRQTIADALTESGLTPDCLELEITESMIMHNAERAREVLQHFHDLGAHVLIDDFGT 1020 Query: 257 GYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSKQLHIDVIADGIETKKQ 316 GY+ +L++ P + + ++ DI + I II ++ L I V+A+G+ET++Q Sbjct: 1021 GYSSFGYLKHFPIDSLKIDRSFVRDIPDDVDDMAITQAIIAMAHSLQIKVVAEGVETQEQ 1080 Query: 317 AGYMIERGVKYLKGIALSSPLPADAFVRKL 346 ++ ++G ++G S PL + FVR L Sbjct: 1081 LAFLKKQGCDQIQGFLFSEPLHSHDFVRML 1110 >UniRef50_Q39X25 Diguanylate cyclase/phosphodiesterase n=2 Tax=Geobacter RepID=Q39X25_GEOMG Length = 633 Score = 349 bits (895), Expect = 1e-94, Method: Composition-based stats. Identities = 58/311 (18%), Positives = 120/311 (38%), Gaps = 7/311 (2%) Query: 38 KGYSVNEISKRRNRSIK-TVSCQKMKLYKKLNVKSDLTLWRDVFLRFK-AYLQPKNIICD 95 + ++ SI +V + L +D+ ++R L + Sbjct: 306 TPFVIDGYELFITTSIGISVYPHDGRSGDALVKNADVAMYRAKEQGRNNCQLFAPEMNAR 365 Query: 96 NFNSSVLPVVSSKGESMAHYNIYYQPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRIN 155 F L + + ++YQP N ++G IA + + ++ S I Sbjct: 366 AFERLSLENDMRRALERDEFVLHYQPKVNVEHGQIACMEALVRWQHPSMG-LVPPSRFIP 424 Query: 156 YNPNDNKVSYLFGHINKLFSPIKNNLPHG----FFITININPEDILTCDIERECLHFIKV 211 + L + + + +N++P + D+ + Sbjct: 425 LAEETGLIVPLGEWVLRTACQQNRAWQDAGYPTMQVAVNLSPRQLRQGDLSETVARVLAE 484 Query: 212 FGTERIRLVLQFSTKEELYIIRRYQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSY 271 G LV++ + + + RR+ V +S++DFG GY+ L +L+ P Sbjct: 485 TGLAPGWLVIEVTESILMDDAEETIRTFRRLDRMGVRISIDDFGTGYSSLHYLKKFPVHT 544 Query: 272 VNLHKTMFHDIESNSLTDIIATTIIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGI 331 + + ++ +I SN + IA +I ++K L++ V+A+G+ET +Q + +Y++G Sbjct: 545 LKIDRSFVREIASNPDDEAIAGAVISMAKGLNLGVVAEGVETVEQMEVLRALNCRYMQGF 604 Query: 332 ALSSPLPADAF 342 S P PA+ F Sbjct: 605 LFSEPAPAEQF 615 >UniRef50_C5CTK8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Variovorax paradoxus S110 RepID=C5CTK8_VARPS Length = 1107 Score = 348 bits (893), Expect = 2e-94, Method: Composition-based stats. Identities = 61/335 (18%), Positives = 132/335 (39%), Gaps = 17/335 (5%) Query: 28 IEIELLSQLLKGYSVNEISKRRNRSIK-TVSCQKMKLYKKLNVKSDLTLWRDV------F 80 + ++L+ + + + + S+ ++ + L +D ++R F Sbjct: 770 LAEKVLACCAEPFFLAGRELHVSASVGVSIYPDNGADAEALLKNADTAMYRAKERGRNTF 829 Query: 81 LRFKAYLQPKNIICDNFNSSVLPVVSSKGESMAHYNIYYQPIYNAKNGNIAGCDVTIALK 140 + A + +N +L ++YQP + + I G + + Sbjct: 830 RFYAAKMNAQNT-----EQLMLESALRHALERGELEMHYQPKMDLQTQRIVGVEALMRWH 884 Query: 141 NSDGSAFALDSDRINYNPNDNKVSYLFGH-INKLFSPIKNNLPHGFF---ITININPEDI 196 + I + L + + + ++ +G +++N++P Sbjct: 885 HPILGMI-PPVQFIPIAEELGLIVSLGKWALERACADSRSWQKYGLPKVLMSVNLSPRQF 943 Query: 197 LTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSLRRIRNNNVYLSLNDFGM 256 + + + ++ G E L L+ + + LR IR+ V L+++DFG Sbjct: 944 ESRTLIADIQAVLEASGLEPSLLELEITEGAVMANPEHAAKLLRAIRDMGVGLAIDDFGT 1003 Query: 257 GYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSKQLHIDVIADGIETKKQ 316 GY+ LS+L++ P S V + ++ +D+ ++ + II L+ L + V+A+GIET Q Sbjct: 1004 GYSSLSYLKHFPLSTVKIDRSFINDLSQDADARALIDGIITLAHGLRMKVVAEGIETTAQ 1063 Query: 317 AGYMIERGVKYLKGIALSSPLPADAFVRKLLASLK 351 Y+ G +G L P+PAD + L+ Sbjct: 1064 LDYLRSHGCDEAQGYWLCKPVPADEVRNFMARHLR 1098 >UniRef50_B1M266 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=7 Tax=Proteobacteria RepID=B1M266_METRJ Length = 960 Score = 347 bits (892), Expect = 2e-94, Method: Composition-based stats. Identities = 59/325 (18%), Positives = 127/325 (39%), Gaps = 16/325 (4%) Query: 39 GYSVNEISKRRNRSIK-TVSCQKMKLYKKLNVKSDLTL------WRDVFLRFKAYLQPKN 91 YS+ + +I T++ KL +++ L R F F+ + + Sbjct: 641 PYSLTHHTISVGLTIGITLAPSDGSNADKLLKNAEVALDRGKTEARGAFRFFEPAMDARL 700 Query: 92 IICDNFNSSVLPVVSSKGESMAHYNIYYQPIYNAKNGNIAGCDVTIALKNSDGSAFALDS 151 I ++ + + +YYQPIY+ + I G + + + + + Sbjct: 701 I-----ARRIMERDLRDALAREAFEVYYQPIYSLETDRICGFEALLRWNHPVRGFVSP-A 754 Query: 152 DRINYNPNDNKVSYLFGHINKLFSPIKNNLPHGFFITININPEDILTCDIERECLHFIKV 211 + I + L + + P + +N++ + + ++ Sbjct: 755 EFIPIAEELGLIVPLGEWVLRRACEEAARWPDELKVAVNVSAVQFTSASLVTAVREALRR 814 Query: 212 FGTERIRLVLQFSTKEELYIIRRYQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSY 271 G RL L+ + + + L +R V ++++DFG GY+ LS+L++ PF Sbjct: 815 TGLPGRRLELEITETVLVANPGATTAILHSLRALGVRVAMDDFGTGYSSLSYLRSFPFDK 874 Query: 272 VNLHKTMFHDIESNSLTDIIATTIIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGI 331 + + ++ D+ TD I +I L L + A+G+ET+ Q ++ G ++G Sbjct: 875 IKIDQSFVRDLCVKDGTDFIVRAVIGLGASLGMTTTAEGVETEAQLAHLRAEGCDEVQGY 934 Query: 332 ALSSPLPADA---FVRKLLASLKQV 353 S P+P +R+ +L+ + Sbjct: 935 LFSRPVPVSEVASVIRRWNGALRAI 959 >UniRef50_Q1K234 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1K234_DESAC Length = 766 Score = 347 bits (892), Expect = 3e-94, Method: Composition-based stats. Identities = 60/337 (17%), Positives = 132/337 (39%), Gaps = 7/337 (2%) Query: 16 IVNIEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIK-TVSCQKMKLYKKLNVKSDLT 74 + ++ P + ++L+ + + + R SI ++ + + + L +D Sbjct: 421 MTHVNHPADARIMAQKILNAFEQPFPLGNRELRITTSIGASLYPRDGEQSEDLLRHADAA 480 Query: 75 LWRDVFLRFK-AYLQPKNIICDNFNSSVLPVVSSKGESMAHYNIYYQPIYNAKNGNIAGC 133 +++ + + + L + + + ++YQP +G I GC Sbjct: 481 MYQAKKQGGNGFQFCSEEMDTRAHKALELEGDLRQALQLGSFVLHYQPKVKIASGKIDGC 540 Query: 134 DVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHI----NKLFSPIKNNLPHGFFITI 189 + + + D + D D I + L + + F + I + Sbjct: 541 EALVRWNHPDKGMISPD-DFIPLAEETGLIIALGEWVLREACRQFKAWQAQGLPPIKIAV 599 Query: 190 NINPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSLRRIRNNNVYL 249 N++ L D + F + L L+ + + R L ++ L Sbjct: 600 NLSARQFLQSDFVESIQTILHEFDIDPHWLDLELTESMVMEDPDRIAKLLAELKQIGFAL 659 Query: 250 SLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSKQLHIDVIAD 309 SL+DFG GY+ L++L+ P + + ++ D+ S++ +A ++I ++ L I IA+ Sbjct: 660 SLDDFGTGYSSLNYLRRFPIDCLKIDRSFILDVASDATAASVANSVIGIAHSLGIHAIAE 719 Query: 310 GIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKL 346 G+ET++Q ++ ++G S PLPA+ L Sbjct: 720 GVETREQYAFLAMCECDSIQGYLFSKPLPANDLAALL 756 >UniRef50_B8H3B9 Sensory box/GGDEF family protein n=5 Tax=Caulobacteraceae RepID=B8H3B9_CAUCN Length = 748 Score = 347 bits (891), Expect = 3e-94, Method: Composition-based stats. Identities = 59/325 (18%), Positives = 135/325 (41%), Gaps = 7/325 (2%) Query: 26 SEIEIELLSQLLKGYSVNEISKRRNRSIK-TVSCQKMKLYKKLNVKSDLTLWR---DVFL 81 + + ++ + + + S+ +++ +L K+D+ L+R D Sbjct: 376 TRLAARIVEAMAAPFDLQGHHVVIGASVGVSLAPTDGDDADELLKKADMALYRAKADGRG 435 Query: 82 RFKAYLQPKNIICDNFNSSVLPVVSSKGESMAHYNIYYQPIYNAKNGNIAGCDVTIALKN 141 + + + + L + + + ++YQP+Y+ + + GC+ + ++ Sbjct: 436 AYHFFERAMDEQLQARR--ALELDLRRALQAGEFELFYQPLYHLGDERVTGCEALLRWRH 493 Query: 142 SDGSAFALDSDRINYNPNDNKVSYLFGHINKLFSPIKNNLPHGFFITININPEDILTCDI 201 + + +D I + L + + N P + +N++P + Sbjct: 494 PERGMVSP-ADFIPLAEEIGLIVQLGEWVLRRACAEAANWPEHVRLAVNLSPAQFRDRGL 552 Query: 202 ERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSLRRIRNNNVYLSLNDFGMGYAEL 261 R + + G RL L+ + L + + L ++ V +S++DFG GY+ L Sbjct: 553 VRTVVSALAASGLPAQRLELEITESVLLQDSQANMTMLHDLKALGVRISMDDFGTGYSSL 612 Query: 262 SHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSKQLHIDVIADGIETKKQAGYMI 321 S+L++ PF + + +T DI +S I ++DL + + A+G+ET+ Q + Sbjct: 613 SYLRSFPFDKIKIDQTFVRDILHDSDAMAIIKAVLDLGASMGVVTTAEGVETQAQLDALR 672 Query: 322 ERGVKYLKGIALSSPLPADAFVRKL 346 ++G ++G +S P PA + L Sbjct: 673 QQGCAEIQGYFISRPAPASEIAKML 697 >UniRef50_C6ML43 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=1 Tax=Geobacter sp. M18 RepID=C6ML43_9DELT Length = 773 Score = 347 bits (891), Expect = 3e-94, Method: Composition-based stats. Identities = 57/315 (18%), Positives = 132/315 (41%), Gaps = 7/315 (2%) Query: 35 QLLKGYSVNEISKRRNRSIK-TVSCQKMKLYKKLNVKSDLTLWRDVFLRFKAYLQPKNII 93 + + ++ + SI TV + + + L +++ ++R + + Sbjct: 316 AISLPFLMDGQELVISCSIGITVYPKDGEDAQTLVKNAEVAMYRAKEQGRNCFRYYTREL 375 Query: 94 CDNFNSSV-LPVVSSKGESMAHYNIYYQPIYNAKNGNIAGCDVTIALKNSDGSAFALDSD 152 + S + + K + ++YQP + G ++G + I +N++ Sbjct: 376 NERVASRMSMEKHLRKALENEEFELWYQPQADLNTGRLSGMEGLIRWRNAELGMVQP-GS 434 Query: 153 RINYNPNDNKVSYLFGHINKLFS----PIKNNLPHGFFITININPEDILTCDIERECLHF 208 I + + + + ++ + +N++P ++ Sbjct: 435 FIPLAEETGLIVQIGEWVVRTACLQNRRWQDAGLSPLTVAVNLSPRQFRDRELTGVIAGV 494 Query: 209 IKVFGTERIRLVLQFSTKEELYIIRRYQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIP 268 ++ G + L L+ ++ + + L ++ V LS++DFG GY+ LS+L+ P Sbjct: 495 LRETGLDPRYLGLEIVESMVMHDVESAAAMLNELKALGVKLSMDDFGTGYSSLSYLKRFP 554 Query: 269 FSYVNLHKTMFHDIESNSLTDIIATTIIDLSKQLHIDVIADGIETKKQAGYMIERGVKYL 328 F+ + + + DI ++ + IA +II ++ L++ V+A+G+ET+ Q ++ G + Sbjct: 555 FAKLKIDLSFVRDIMTDPGSAAIAKSIISMAHNLNLSVVAEGVETEGQLEFLRAHGCNEI 614 Query: 329 KGIALSSPLPADAFV 343 +G LS PLPA F Sbjct: 615 QGYYLSRPLPAAEFE 629 >UniRef50_A1WHK3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Verminephrobacter eiseniae EF01-2 RepID=A1WHK3_VEREI Length = 859 Score = 347 bits (890), Expect = 5e-94, Method: Composition-based stats. Identities = 63/319 (19%), Positives = 133/319 (41%), Gaps = 9/319 (2%) Query: 32 LLSQLLKGYSVNEISKRRNRSIKTVSCQKMKLY-KKLNVKSDLTLWRDVFLRFKAYLQPK 90 LL+ L + ++++ SI + +L +L ++DL L++ Sbjct: 528 LLASLNQPFALDGGQHYSTLSIGVTLFGEQRLSVDELLKRADLALYQAKAAGRNTQRFFD 587 Query: 91 NIICDNFN-SSVLPVVSSKGESMAHYNIYYQPIYNAKNGNIAGCDVTIALKNSDGSAFAL 149 + N S L +G + A +YYQP+ + + G + + ++ Sbjct: 588 PDMQAAVNARSNLEADLRQGLARAELLVYYQPVVD-HQARLMGAEALVRWRHPQRGMIGP 646 Query: 150 DSDRINYNPNDNKVSYLFGHINKLFSPIKNNLPH-----GFFITININPEDILTCDIERE 204 +D I + L ++ + G I++N++ + Sbjct: 647 -ADFIPLAEQTGLILPLGQYVLQTACAQLQRWSQHPDTAGLSISVNVSARQFRQPGFVAQ 705 Query: 205 CLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSLRRIRNNNVYLSLNDFGMGYAELSHL 264 LH +K G + RL L+ + L I + + ++++ V +L+DFG GY+ LS+L Sbjct: 706 VLHQLKSHGADPRRLKLELTESLLLGDIEDTIARMAQLKSEGVGFALDDFGTGYSSLSYL 765 Query: 265 QNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSKQLHIDVIADGIETKKQAGYMIERG 324 + +P + + ++ ++ ++ I TI+ L+K L + V+A+G+ET Q ++ G Sbjct: 766 KRLPLDQIKIDQSFVREVLADPNDAAIVRTILALAKSLDLQVVAEGVETTGQLSFLQLHG 825 Query: 325 VKYLKGIALSSPLPADAFV 343 + +G P+P + F Sbjct: 826 CEGFQGYLFGRPVPMEVFA 844 >UniRef50_C1DA12 Sensory box/GGDEF family protein n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1DA12_LARHH Length = 1041 Score = 346 bits (889), Expect = 6e-94, Method: Composition-based stats. Identities = 59/339 (17%), Positives = 130/339 (38%), Gaps = 17/339 (5%) Query: 26 SEIEIELLSQLLKGYSVNEISKRRNRSIK-TVSCQKMKLYKKLNVKSDLTLW------RD 78 SE+ +L+ + V+ +I ++ + + L +D+ ++ R+ Sbjct: 689 SEVAACILTAMSVPVRVDGRELPTTPTIGVSLYPRDGEEADDLIRNADIAMYQAKARGRN 748 Query: 79 VFLRFKAYLQPKNIICDNFNSSVLPVVSSKGESMAHYNIYYQPIYNAKNGNIAGCDVTIA 138 F + + L ++YQP + +G++ GC+ + Sbjct: 749 TFQLYTPDMNAAAA-----ERLQLQGELRNAHLRGEIMLHYQPQIDVTDGHVVGCEALMR 803 Query: 139 LKNSDGSAFALDSDRINYNPNDNKV----SYLFGHINKLFSPIKNNLPHGFFITININPE 194 K+ + I + ++ + + + +N++ Sbjct: 804 WKHPTLGMVSP-GRFIPLAEESGLIITLGNWAIREACRQAMVWQRAGLPPLTVAVNLSGC 862 Query: 195 DILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSLRRIRNNNVYLSLNDF 254 + + L L+ + ++ + + ++L ++ V LS++DF Sbjct: 863 QFQQSNFTAVVADALADTSLPPQYLELELTESIVMHDVEQVIATLTELKALGVQLSIDDF 922 Query: 255 GMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSKQLHIDVIADGIETK 314 G GY+ L++L+ P + + + D+E++ I II L K L++ +IA+G+ET+ Sbjct: 923 GTGYSSLNYLKRFPVDLLKIDQGFVRDVETDPSDAAIVRAIIALGKILNLRLIAEGVETQ 982 Query: 315 KQAGYMIERGVKYLKGIALSSPLPADAFVRKLLASLKQV 353 Q Y+ GV +++G S PLPA+ L L V Sbjct: 983 GQLDYLHAAGVDFIQGYYFSRPLPAEDMATYLAQRLLPV 1021 >UniRef50_Q221U3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Rhodoferax ferrireducens T118 RepID=Q221U3_RHOFD Length = 1037 Score = 346 bits (889), Expect = 6e-94, Method: Composition-based stats. Identities = 58/348 (16%), Positives = 141/348 (40%), Gaps = 21/348 (6%) Query: 19 IEFPCL----LSEIEIELLSQLLKGYSVNEISKRRNRSIKT-VSCQKMKLYKKLNVKSDL 73 + P S++ +LL+ + + + + SI + + ++ L+ +D Sbjct: 696 LLLPGTDEAQASQVATKLLAAVAQPCQIEQNELVSTVSIGIALYPNDGQDFETLSKNADA 755 Query: 74 TLWR------DVFLRFKAYLQPKNIICDNFNSSVLPVVSSKGESMAHYNIYYQPIYNAKN 127 ++R + F F +Q + + L + +++QP ++ Sbjct: 756 AMYRVKQASRNDFRFFTQEMQTHSA-----RTLQLVNALRHALPRHEFELHFQPQVALQD 810 Query: 128 GNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINK-LFSPIKNNLPHGFF 186 G+I G + + ++ + + ++ I + ++ + + + +K L G Sbjct: 811 GHIVGAEALLRWRHPELGMISP-AEFIPIAEDSGQILAIGEWVLRTAVRQLKQWLDAGLR 869 Query: 187 ---ITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSLRRIR 243 I +N++ ++ + L L+ + + + + ++ Sbjct: 870 PMVIAVNLSAVQFRHPNLMALVTRILDEAALPPEFLELELTEAAAMDDPPAAIAIMNKLD 929 Query: 244 NNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSKQLH 303 + + +S++DFG GY+ LS+L+ + + + ++ DI + I T II+L+ L Sbjct: 930 EHGIRMSIDDFGTGYSSLSYLKKFKVNKLKIDQSFVRDISDDPDDKAIVTAIINLASSLG 989 Query: 304 IDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLLASLK 351 + IA+G+ET Q ++ +G ++G +S PLP D F + S+ Sbjct: 990 MHTIAEGVETASQLAFLRLQGCDEVQGYYVSKPLPKDQFEAFVRNSIS 1037 >UniRef50_Q5P4W8 Putative uncharacterized protein n=2 Tax=Proteobacteria RepID=Q5P4W8_AZOSE Length = 1039 Score = 346 bits (889), Expect = 6e-94, Method: Composition-based stats. Identities = 66/359 (18%), Positives = 147/359 (40%), Gaps = 19/359 (5%) Query: 7 KLNLIDYDSIVN-IEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIK-TVSCQKMKLY 64 +L ++ +V+ + L I +L++ L + +++ + S+ TV Sbjct: 678 RLGGDEFTVVVHDLADRADLGAIADKLVAVLREPFALRGARHHISGSVGITVFPDDGDDV 737 Query: 65 KKLNVKSDLTLWRDVFLR------FKAYLQPKNIICDNFNSSVLPVVSSKGESMAHYNIY 118 + L +D+ +++ + ++Q D L + ++ Sbjct: 738 QTLLRNADIAMYKAKQAGKNRAQPYAPHMQ-----ADALARVHLEADLRMAVEQRAFELH 792 Query: 119 YQPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINK-LFSPI 177 YQPI + +G + G + I K+ + + + I + + + + + Sbjct: 793 YQPIVDCASGALVGAEALIRWKHPERGMISP-LEFIPVAEECGLIVPIGEWVLREVVRQR 851 Query: 178 KNNLPHG---FFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRR 234 ++ L G +T+N++ + + FGT R LV + + + Sbjct: 852 RDWLARGHPPLRLTLNVSGVQFREAGLPELVRTLLAEFGTARSSLVFEITESVLMGGSEN 911 Query: 235 YQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATT 294 ++ + I+ + +L+DFG G++ LS+L+ P V + ++ D + + Sbjct: 912 VEARMCDIKEQGICFALDDFGTGFSSLSYLKRFPVDIVKIDRSFVRDCPDDRNDATLVEA 971 Query: 295 IIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLLASLKQV 353 II+++ L + V A+G+E+ +Q ++ G YL+G + PL ADAF L+A L+ Sbjct: 972 IINMAHSLGLRVTAEGVESAEQREFLRALGCDYLQGYLIGKPLAADAFEA-LMAPLRSA 1029 >UniRef50_Q3A4W5 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A4W5_PELCD Length = 1274 Score = 346 bits (888), Expect = 8e-94, Method: Composition-based stats. Identities = 59/329 (17%), Positives = 130/329 (39%), Gaps = 7/329 (2%) Query: 27 EIEIELLSQLLKGYSVNEISKRRNRSIKT-VSCQKMKLYKKLNVKSDLTLWRDVFLRFKA 85 +I LL +L + + ++ + S +S L +D+ +++ Sbjct: 910 KIAHNLLRKLNEPFFLHGRELYVSASFGICLSETDNVDGTILLRNADIAMYKAKAEGCGL 969 Query: 86 YLQPKNIICDNFNSSVLPVVSSKGESMAHYNIYYQPIYNAKNGNIAGCDVTIALKNSDGS 145 Y + + + + + +YYQP G I GC+ + ++ Sbjct: 970 YFYSHEMNEHLIKTLEMENSLRQALEKNEFQLYYQPKVEHATGRIIGCEALLRWRHPQRG 1029 Query: 146 AFALDSDRINYNPNDNKVSYLFGHI----NKLFSPIKNNLPHGFFITININPEDILTC-D 200 S+ I + + + + + + +NI+ + Sbjct: 1030 MI-PPSEFIPLAEETGLIVQIGHWVLAEACRQSKIWETEGLPPLTMAVNISARQFYQGEN 1088 Query: 201 IERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSLRRIRNNNVYLSLNDFGMGYAE 260 + + ++ +L L+ + + + ++R+I+ V LSL+DFG GY+ Sbjct: 1089 LIQAVKSTLERSQLVPSQLELELTESMVMKDAVNAERTMRKIKQLGVSLSLDDFGTGYSS 1148 Query: 261 LSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSKQLHIDVIADGIETKKQAGYM 320 L++L++ P + + ++ DI S++ + I +II ++ L + +A+G+E Q + Sbjct: 1149 LNYLRSFPVDSLKIDRSFILDIASDASSAAILNSIIAIAHTLGLQTVAEGVENNDQLALV 1208 Query: 321 IERGVKYLKGIALSSPLPADAFVRKLLAS 349 G Y++G S PLP + FV LA+ Sbjct: 1209 ANCGCNYIQGYLFSRPLPPEDFVALFLAN 1237 >UniRef50_B7V0E6 Motility regulator n=25 Tax=Pseudomonas RepID=B7V0E6_PSEA8 Length = 1415 Score = 346 bits (888), Expect = 9e-94, Method: Composition-based stats. Identities = 51/327 (15%), Positives = 125/327 (38%), Gaps = 17/327 (5%) Query: 27 EIEIELLSQLLKGYSVNEISKRRNRSIK-TVSCQKMKLYKKLNVKSDLTLW------RDV 79 ++ +L +L + +++ SI +S Q L +D ++ ++ Sbjct: 1080 QVAELILGRLARPFTLEGREFFVTASIGVALSPQDGAELSLLMKNADTAMYHAKEMGKNN 1139 Query: 80 FLRFKAYLQPKNIICDNFNSSVLPVVSSKGESMAHYNIYYQPIYNAKNGNIAGCDVTIAL 139 F ++A + + + L + + + ++YQP + + G + + Sbjct: 1140 FQFYQAEMNARAL-----ERLELESDLRRALELGEFVLHYQPQFTGDGRRLTGAEALLRW 1194 Query: 140 KNSDGSAFALDSDRINYNPNDNKVS----YLFGHINKLFSPIKNNLPHGFFITININPED 195 ++ S+ I V+ +L K +++N++ Sbjct: 1195 QHPRRG-LVPPSEFIPVLEEIGLVAQVGDWLLAEACKQLRSWHKAKVRVPKVSVNLSARQ 1253 Query: 196 ILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSLRRIRNNNVYLSLNDFG 255 + + G L L+ + + + L ++ + ++++DFG Sbjct: 1254 FADGQLGERIAAILYETGIPPACLELELTESILMSDVAEAMQILSGLKRLGLAIAVDDFG 1313 Query: 256 MGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSKQLHIDVIADGIETKK 315 GY+ L++L+ P + + ++ + IA II ++ L++ VIA+G+E++ Sbjct: 1314 TGYSSLNYLKQFPIDVLKIDRSFVDGLPHGEQDAQIARAIIAMAHSLNLMVIAEGVESQA 1373 Query: 316 QAGYMIERGVKYLKGIALSSPLPADAF 342 Q ++ E G ++G P+PA+ F Sbjct: 1374 QLDFLREHGCDEVQGYLFGRPMPAEQF 1400 >UniRef50_C4K931 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Thauera sp. MZ1T RepID=C4K931_THASP Length = 855 Score = 345 bits (887), Expect = 1e-93, Method: Composition-based stats. Identities = 56/340 (16%), Positives = 126/340 (37%), Gaps = 17/340 (5%) Query: 18 NIEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIK-TVSCQKMKLYKKLNVKSDLTLW 76 N+ P + + ++++L + +V S+ V + L +D+ ++ Sbjct: 518 NLSGPDEAATMARRMVAELRRPVNVEGRELVVTTSVGVAVYPDDSRDADTLVKHADVAMY 577 Query: 77 RD------VFLRFKAYLQPKNIICDNFNSSVLPVVSSKGESMAHYNIYYQPIYNAKNGNI 130 R F F+ + +++ L + +Y+QP+ A+ G + Sbjct: 578 RAKDEGRNSFQLFEPAMNARSL-----ERLALETALHRALPRDELQLYFQPVMKAEGGEL 632 Query: 131 AGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINKLFSPIKNNLPH----GFF 186 + + ++ D + +D I + + + + + Sbjct: 633 VAVEALLRWRHPDLGLVSP-ADFIPLAEDTGLIVPIGEWVLRSACEHHRRWCEAGGAPLH 691 Query: 187 ITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSLRRIRNNN 246 + +NI+ + G L L+ + + R + L +R Sbjct: 692 MMVNISARQFREEGFAAMVGSVLAETGMTPGDLTLELTESMLMDDTDRALARLDHLRALG 751 Query: 247 VYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSKQLHIDV 306 V L+++DFG GY+ L++L+ P + + + I+ N+ + + I+ L L + V Sbjct: 752 VCLAIDDFGTGYSSLAYLKRFPIDELKIDRLFVRGIDRNTRDAALVSAIVSLGHSLGLRV 811 Query: 307 IADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKL 346 +A+G+ET + +G +G S PLP + FV+ Sbjct: 812 VAEGVETAAHLDVLRRQGCDLAQGFHFSPPLPWEEFVKAY 851 >UniRef50_B6AQA1 Diguanylate cyclase/phosphodiesterase n=2 Tax=Leptospirillum sp. Group II RepID=B6AQA1_9BACT Length = 702 Score = 345 bits (887), Expect = 1e-93, Method: Composition-based stats. Identities = 59/336 (17%), Positives = 119/336 (35%), Gaps = 17/336 (5%) Query: 22 PCLLSEIEIELLSQLLKGYSVNEISKRRNRSIKT-VSCQKMKLYKKLNVKSDLTLW---- 76 P + EI ++ + + V+ S SI + ++ L +D ++ Sbjct: 357 PGKVHEIARKIRDCVAENMEVDGQSLSVTTSIGISLFPHDGTTFRTLLASADSAMYYAKS 416 Query: 77 --RDVFLRFKAYLQPKNIICDNFNSSVLPVVSSKGESMAHYNIYYQPIYNAKNGNIAGCD 134 + L + + +G + +YYQP G + + Sbjct: 417 KGSGQIQFYSGELNDSAALRIEMEND-----LRRGIEKEEFVLYYQPKVTLATGEVESVE 471 Query: 135 VTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHI----NKLFSPIKNNLPHGFFITIN 190 + + + I + L I + + + +N Sbjct: 472 ALVRWNHPEKG-ILPPHYFIPRAEETGLIIPLGRWIMDRACREAVIWQQAGFSRLRVAVN 530 Query: 191 INPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSLRRIRNNNVYLS 250 ++ + D+ +E L ++ G L L+ + + +L IR V+++ Sbjct: 531 LSALQFINQDLMKEILDALESSGLPPECLELEITESLLMEDPEGAMRTLSGIRQKGVHVA 590 Query: 251 LNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSKQLHIDVIADG 310 ++DFG GY+ S+L+ P + + ++ DI N I TII L L++ VIA+G Sbjct: 591 IDDFGTGYSSFSYLKKFPLDRLKIDRSFITDICDNPNDAAIVRTIITLGHNLNLKVIAEG 650 Query: 311 IETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKL 346 +E++ Q + +G S PLP +L Sbjct: 651 VESQAQLEMLKAMECDAYQGFFNSRPLPPGELAERL 686 >UniRef50_Q3JBM4 Sensor protein n=4 Tax=Bacteria RepID=Q3JBM4_NITOC Length = 1499 Score = 345 bits (887), Expect = 1e-93, Method: Composition-based stats. Identities = 69/335 (20%), Positives = 136/335 (40%), Gaps = 6/335 (1%) Query: 19 IEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIKT-VSCQKMKLYKKLNVKSDLTLWR 77 IE P + +E+ ++ S L K ++ + + SI + + L +D ++R Sbjct: 1144 IESPRVAAEVAAKICSVLSKVFAFSGQEMYISTSIGISLYPGDGEDVSTLVKHADTAMFR 1203 Query: 78 DVFLRFKAYLQPKNIICDNFNSSVLPVVSSKGESMAHYNIYYQPIYNAKNGNIAGCDVTI 137 K + L + +YYQP N G IA + I Sbjct: 1204 AKEQGNSYQFYEKGMETAAVKRLGLEAELRRALEQNELALYYQPQINLGTGEIATLETLI 1263 Query: 138 ALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINK-LFSPIKNNLPHGF---FITININP 193 + + S+ I ++ + I + + +++ L GF I +N++ Sbjct: 1264 RWHHPEHGLI-PPSEFIPLAEETGLIASIGAWILREACTQMQSWLQRGFGPFHIAVNVSG 1322 Query: 194 EDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSLRRIRNNNVYLSLND 253 ++ D+ + + +K G L L+ + + RR+R + +++D Sbjct: 1323 RELEREDLVDKIVTILKETGLPPKWLELEITESVVMKGAGAAIPKFRRLREMGIKFAIDD 1382 Query: 254 FGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSKQLHIDVIADGIET 313 FG GY+ L++L++ P + + + HD+ SN I II L+ L + V+A+G+ET Sbjct: 1383 FGTGYSSLNYLKSFPVDILKIDRCFIHDVVSNPDDAAIIKGIIALAHSLRLKVVAEGVET 1442 Query: 314 KKQAGYMIERGVKYLKGIALSSPLPADAFVRKLLA 348 + Q ++ +G LS PL A + +L+ Sbjct: 1443 QAQEEFLKAHQCDRFQGFYLSEPLSAAEIEQAILS 1477 >UniRef50_A1K5S9 GGDEF/EAL-domain containing protein n=1 Tax=Azoarcus sp. BH72 RepID=A1K5S9_AZOSB Length = 1090 Score = 345 bits (887), Expect = 1e-93, Method: Composition-based stats. Identities = 57/332 (17%), Positives = 127/332 (38%), Gaps = 16/332 (4%) Query: 28 IEIELLSQLLKGYSVNEISKRRNRSIK-TVSCQKMKLYKKLNVKSDLTLW------RDVF 80 + ++L L +++ + SI ++ L +D ++ R+ F Sbjct: 762 VARKMLDALATPVVIDDHELAPSVSIGISLFPSDGTDVDTLLKHADTAMYGAKEVGRNNF 821 Query: 81 LRFKAYLQPKNIICDNFNSSVLPVVSSKGESMAHYNIYYQPIYNAKNGNIAGCDVTIALK 140 F + + + +L + ++YQP A + GC+ + + Sbjct: 822 QFFVPEMNTRAL-----ERLLLENALRRAIERNELTLHYQPQVAATSDRPNGCEALVRWQ 876 Query: 141 NSDGSAFALDSDRINYNPNDNKVSYLFGHINKLFSPIKNNLPHG---FFITININPEDIL 197 + D + I + + L + + + + +NI+ Sbjct: 877 HPDFG-LVPPAQFIPIAEDSGLIVPLGEWVLREACRQQVKWARSGLHLMVGVNISALQFR 935 Query: 198 TCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSLRRIRNNNVYLSLNDFGMG 257 D + + G R+ L+ + + LR + N + L+L+DFG G Sbjct: 936 RADFVDSVVQVLAETGANPERIELEITESALMDASDALSRRLRELANMGLSLALDDFGTG 995 Query: 258 YAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSKQLHIDVIADGIETKKQA 317 Y+ L++L+ +P + + ++ D+ + + + L++ L ++V+A+G+ET Q Sbjct: 996 YSSLAYLKRLPIGRLKIDRSFVKDLPGDPEDAAVTAATLSLARDLGLEVVAEGVETVAQR 1055 Query: 318 GYMIERGVKYLKGIALSSPLPADAFVRKLLAS 349 +++ RG L+G S PL AF + A+ Sbjct: 1056 DFLVARGCHTLQGYLYSRPLDVAAFEAWMQAT 1087 >UniRef50_Q21WW2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=4 Tax=Proteobacteria RepID=Q21WW2_RHOFD Length = 874 Score = 345 bits (885), Expect = 2e-93, Method: Composition-based stats. Identities = 56/330 (16%), Positives = 124/330 (37%), Gaps = 17/330 (5%) Query: 28 IEIELLSQLLKGYSVNEISKRRNRSIKT-VSCQKMKLYKKLNVKSDLTLWRDV------F 80 I LL L + + SI + + L+ +D ++R + Sbjct: 530 IAEMLLQSALVAFELEPHELTVTPSIGIALFPGDGSDFDTLSRCADAAMYRAKKDGRNNY 589 Query: 81 LRFKAYLQPKNIICDNFNSSVLPVVSSKGESMAHYNIYYQPIYNAKNGNIAGCDVTIALK 140 F A +Q ++ + L + ++YQP + +G + G + + Sbjct: 590 RFFTAEMQARSE-----RTLTLENALRRALERNQLQLHYQPQISLASGRVVGAEALLRWS 644 Query: 141 NSDGSAFALDSDRINYNPNDNKVSYLFGHINKL-FSPIKNNLPHG---FFITININPEDI 196 + + A ++ I + + + + +K + G +++N++ Sbjct: 645 HPELGAV-PPAEFIPVAETCGLILPIGEWVLRTSVQQLKAWIDAGMLPIALSVNLSSVQF 703 Query: 197 LTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSLRRIRNNNVYLSLNDFGM 256 D+ + L L+ + + + + + V +S++DFG Sbjct: 704 RHADLPELVTSILNEAQLPAHLLELELTENVAMTDPLGAIAVMNNLHERGVRMSIDDFGT 763 Query: 257 GYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSKQLHIDVIADGIETKKQ 316 GY+ LS+L+ + + ++ DI +S I II ++ L + IA+G+ET+ Q Sbjct: 764 GYSSLSYLKKFRVYKIKIDQSFVRDITEDSDDKAIVGAIISMATSLGMQTIAEGVETEGQ 823 Query: 317 AGYMIERGVKYLKGIALSSPLPADAFVRKL 346 ++ +G ++G S PLP + F + Sbjct: 824 LEFLKAKGCTEVQGYYFSRPLPVEQFEAFM 853 >UniRef50_C4L9X9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Tolumonas auensis DSM 9187 RepID=C4L9X9_TOLAT Length = 1101 Score = 345 bits (885), Expect = 2e-93, Method: Composition-based stats. Identities = 61/332 (18%), Positives = 134/332 (40%), Gaps = 10/332 (3%) Query: 25 LSEIEIELLSQLLKGYSV---NEISKRRNRSIKTVSCQKMKLYKKLNVKSDLTLWRDVFL 81 + ++L L +S+ E+ + I ++ + + K+L ++D ++R Sbjct: 765 VEHFAEDILQLLKDPFSLPNGREVIIGASIGI-SLYPEHGQTPKELLQQADAAMYRAKAH 823 Query: 82 RFKAYLQPKNIICDNFNSSV-LPVVSSKGESMAHYNIYYQPIYNAKNGNIAGCDVTIALK 140 + + + + L V + + +Y+QP + + I G + + + Sbjct: 824 GRSCFRYFSDELTRAAEQRLDLEVRLQRALRLNELCLYFQPQIDISSNRIIGAEALVRWQ 883 Query: 141 NSDGSAFALDSDRINYNPNDNKVSYLFGHI----NKLFSPIKNNLPHGFFITININPEDI 196 + + + I + L + + + + +NI+P Sbjct: 884 DPAHGLISP-AQFIPVAEETGLIKQLGEWVLLEACRQGKEWQQKGLPAINLAVNISPVQF 942 Query: 197 LTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSLRRIRNNNVYLSLNDFGM 256 +I + +K G L L+ + + L +R + L+++DFG Sbjct: 943 RNSNILESVFNALKQTGYPASLLELELTESALMTHENEAVEILSALRKYGIRLAIDDFGT 1002 Query: 257 GYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSKQLHIDVIADGIETKKQ 316 GY+ L++L+ P + + K+ DI IA I+ ++ L + V+A+G+ET++Q Sbjct: 1003 GYSSLAYLKRFPLDVLKIDKSFVDDIPHKKDDMEIAAAIVAMAHTLRLKVLAEGVETEEQ 1062 Query: 317 AGYMIERGVKYLKGIALSSPLPADAFVRKLLA 348 ++ E+G +G +S P+PAD F + L A Sbjct: 1063 LTFLKEQGCDCYQGYLMSPPVPADQFEQLLRA 1094 >UniRef50_B8GNC0 Signal transduction protein containing a membrane domain an EAL and a GGDEF domain n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GNC0_THISH Length = 655 Score = 345 bits (885), Expect = 2e-93, Method: Composition-based stats. Identities = 62/332 (18%), Positives = 139/332 (41%), Gaps = 8/332 (2%) Query: 22 PCLLSEIEIELLSQLLKGYSV-NEISKRRNRSIK-TVSCQKMKLYKKLNVKSDLTLWRDV 79 P LS + +L++L + Y + N SI ++ Q + ++L +K+D +++ Sbjct: 313 PQGLSLLAEGILAELAEPYRLSNGQEVFVGGSIGISLYPQDGRSAEQLIMKADTAMYQAK 372 Query: 80 FLRFKAYLQPKNIICDNFN-SSVLPVVSSKGESMAHYNIYYQPIYNAKNGNIAGCDVTIA 138 Y + + N L + ++YQP ++ + G + + Sbjct: 373 DQGRSNYQFYTSALTLAANDRLALETSLRHALEREEFTLHYQPRVRTQDDVMIGMEALVR 432 Query: 139 LKNSDGSAFALDSDRINYNPNDNKVSYLFGHI----NKLFSPIKNNLPHGFFITININPE 194 + D A D+ I ++ L + + + +N++ Sbjct: 433 WHHPDKGLTAPDA-FIPMAEETGLITPLGLWVLRTACRQAQTWMRLYGEPIHMAVNLSMR 491 Query: 195 DILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSLRRIRNNNVYLSLNDF 254 + D+ + ++ G L L+ + + ++L ++ V L+++DF Sbjct: 492 QLRQPDLVSQIDAILRDTGLPASSLELELTESVLMAGDGHTLTALAELKALGVRLAIDDF 551 Query: 255 GMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSKQLHIDVIADGIETK 314 G GY+ L++L+ +P + + ++ DI ++ IA+TII +++ L ++V+A+G+ET Sbjct: 552 GTGYSSLAYLKRLPIDALKIDRSFVSDIPHDASDMAIASTIIAMARTLGLEVVAEGVETP 611 Query: 315 KQAGYMIERGVKYLKGIALSSPLPADAFVRKL 346 +Q ++ + G +G S P+ A A L Sbjct: 612 EQLAFLKKEGCDSYQGFGFSPPVDAQAMTLWL 643 >UniRef50_A6T0F0 Sensory box/GGDEF family protein n=2 Tax=Oxalobacteraceae RepID=A6T0F0_JANMA Length = 699 Score = 345 bits (885), Expect = 2e-93, Method: Composition-based stats. Identities = 67/333 (20%), Positives = 136/333 (40%), Gaps = 15/333 (4%) Query: 24 LLSEIEIELLSQLLKGYSVNEISKRRNRSIKTVSCQKM-KLYKKLNVKSDLTLWRDVFLR 82 ++ +L ++ + + N++ + SI C + + L +D +++ L Sbjct: 370 AITHTMQRVLHEVSQPWKANDLEFQITCSIGLTLCPDDGRDAETLLKNADSAMYKAKELG 429 Query: 83 FKAYLQPKNIICDNFNSSVLPVV-----SSKGESMAHYNIYYQPIYNAKNGNIAGCDVTI 137 + NSSV + + + + ++YQP + + I G + + Sbjct: 430 RNNF----QYFSAEMNSSVTDRLELLNRLRQAITNEDFVLHYQPKVSLASHQIIGAEALV 485 Query: 138 ALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINKLFSPIKNNLPH----GFFITININP 193 NS S + I + L + + I++N++P Sbjct: 486 RW-NSAHSGMVSPASFIPLAEETGLIIPLGEWVLRTACRQNRAWQDAGYPPIPISVNLSP 544 Query: 194 EDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSLRRIRNNNVYLSLND 253 + DI + G E L L+ + + + + L ++R+ V +SL+D Sbjct: 545 RQLARGDIVEVVERILTETGLEAQHLELEITESVMTTDVEKSFALLTQLRSLGVKISLDD 604 Query: 254 FGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSKQLHIDVIADGIET 313 FG GY+ LS+L+ P + + ++ DI ++ + I II L + L++ V+A+GIET Sbjct: 605 FGTGYSSLSYLKRFPVDTLKIDQSFVRDIATDQDSAAIVKAIISLGRNLNLTVLAEGIET 664 Query: 314 KKQAGYMIERGVKYLKGIALSSPLPADAFVRKL 346 + Q +++ G +G +S P+P FV L Sbjct: 665 EDQFQFLLANGCDEGQGYLMSKPVPNKNFVDLL 697 >UniRef50_C0INC4 GGDEF family protein n=1 Tax=uncultured bacterium BLR9 RepID=C0INC4_9BACT Length = 765 Score = 344 bits (884), Expect = 2e-93, Method: Composition-based stats. Identities = 54/330 (16%), Positives = 131/330 (39%), Gaps = 7/330 (2%) Query: 28 IEIELLSQLLKGYSVNEISKRRNRSIKTVSCQKMKL-YKKLNVKSDLTLWRDVFLRFKAY 86 + ++LS + + + + + SI +C + L +D+ +++ Y Sbjct: 433 VAKKILSAVALPHRIGRHELQISASIGISTCPNDADDAETLIKHADIAMYQAKEKGRNNY 492 Query: 87 LQPKNIICDN-FNSSVLPVVSSKGESMAHYNIYYQPIYNAKNGNIAGCDVTIALKNSDGS 145 + + + L + ++YQP N + G+I G + I ++ + Sbjct: 493 QFFRADMNERVLQRQSLESSLRLALERQEFLLHYQPKMNLETGHITGMEALIRWRHPELG 552 Query: 146 AFALDSDRINYNPNDNKVSYLFGHINK-LFSPIKNNLPHGF---FITININPEDILTCDI 201 + I + + + + + +K + G + +N++ + Sbjct: 553 -LVPPASFIGVAEDCGLMQPIGRWVLQEACRQVKEWMVAGLNPVPVAVNVSAVEFRRKHF 611 Query: 202 ERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSLRRIRNNNVYLSLNDFGMGYAEL 261 + ++ + L L+ + + + L +++ V L+++DFG GY+ L Sbjct: 612 FDGVISTLRETDLDPRYLELELTETVLMKEAEPTIAVLHALKSAGVKLAIDDFGTGYSSL 671 Query: 262 SHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSKQLHIDVIADGIETKKQAGYMI 321 S+L +P + + ++ D+ + + I + II + K L+++VIA+G+ET++Q + Sbjct: 672 SYLTRLPVDTLKIDRSFVTDVTTRTDNAAIVSAIIGMGKSLNLNVIAEGVETQEQLALLR 731 Query: 322 ERGVKYLKGIALSSPLPADAFVRKLLASLK 351 +G S P+ A L L+ Sbjct: 732 SHCCAEGQGYYFSRPVSVPAVAELLNTELR 761 >UniRef50_Q89HX5 Bll5864 protein n=1 Tax=Bradyrhizobium japonicum RepID=Q89HX5_BRAJA Length = 799 Score = 344 bits (883), Expect = 3e-93, Method: Composition-based stats. Identities = 61/319 (19%), Positives = 120/319 (37%), Gaps = 7/319 (2%) Query: 32 LLSQLLKGYSVNEISKRRNRSIK-TVSCQKMKLYKKLNVKSDLTLWR---DVFLRFKAYL 87 L+ + Y +++ SI ++S Q +L +DL L+R D ++ + Sbjct: 475 LVEVISAPYEIDDHQIVIGVSIGISLSPQDGSNADELLKNADLALYRAKADGRGTYRFFE 534 Query: 88 QPKNIICDNFNSSVLPVVSSKGESMAHYNIYYQPIYNAKNGNIAGCDVTIALKNSDGSAF 147 + +L + + YYQPI + +G + + + + Sbjct: 535 TGMDARAQARR--LLEMDLRAALQRDEFQPYYQPIRDVASGRVVVFEALLRWNHPQRGLI 592 Query: 148 ALDSDRINYNPNDNKVSYLFGHINKLFSPIKNNLPHGFFITININPEDILTCDIERECLH 207 A + I + L + + P + +N++P ++ Sbjct: 593 AP-INFIPLAEETGLIVQLGEFVLRSACTDAATWPDDVDVAVNLSPVQFRNPNLIASVTA 651 Query: 208 FIKVFGTERIRLVLQFSTKEELYIIRRYQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNI 267 + V G RL L+ + L ++L +R V +SL+DFG GY+ LS+L++ Sbjct: 652 ALTVSGLPARRLELEITESVLLQNSEATLTTLHELRAMGVRISLDDFGTGYSSLSYLRSF 711 Query: 268 PFSYVNLHKTMFHDIESNSLTDIIATTIIDLSKQLHIDVIADGIETKKQAGYMIERGVKY 327 PF + + ++ ++ + + I + L + L I A+G+E Q + G Sbjct: 712 PFDKIKIDRSFVSELATREDSMAIIRAVTGLGRSLGIVTTAEGVENDAQLELLRREGCTQ 771 Query: 328 LKGIALSSPLPADAFVRKL 346 +G S P PA L Sbjct: 772 AQGYLFSKPRPASDVALML 790 >UniRef50_Q5P4Q9 Putative uncharacterized protein n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5P4Q9_AZOSE Length = 813 Score = 344 bits (883), Expect = 3e-93, Method: Composition-based stats. Identities = 60/332 (18%), Positives = 132/332 (39%), Gaps = 11/332 (3%) Query: 25 LSEIEIELLSQLLKGYSVNEISKRRNRSIKT-VSCQKMKLYKKLNVKSDLTLWRD---VF 80 ++ + +LL+QL Y V+ SI + L +D ++ Sbjct: 480 VTHVAAKLLAQLSAPYCVDTTELHTTASIGISLFPDDSADPAALMRNADTAMYHAKAAGR 539 Query: 81 LRFKAYLQPKNIICDNFNSSVLPVVSSKGESMAHYNIYYQPIYNAKNGNIAGCDVTIALK 140 +F+ Y N L + + ++YQP +++++G++ G + + + Sbjct: 540 AKFQFYTDEMNRAATA--RLDLERKLRGAVARGEFELWYQPQFDSRHGHLTGLEALVRWR 597 Query: 141 NSDGSAFALDSDRINYNPNDNKVSYLFGHINK-LFSPIKNNLPHGF---FITININPEDI 196 + A I + + + + + L G I++N++ + Sbjct: 598 HPQDGLIAP-LRFIPLAEETGVIVEIGTWVLREACRQARQWLDAGLPELRISVNLSVRQL 656 Query: 197 LTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSLRRIRNNNVYLSLNDFGM 256 + + G L L+ + + + L+ ++N V ++++DFG Sbjct: 657 REKCLVDTVWTTLAASGLRPGLLELEITESAVMDNPDEAVALLQALKNLGVRIAIDDFGT 716 Query: 257 GYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSKQLHIDVIADGIETKKQ 316 G++ LS+L+ P ++ + ++ DIE ++ +I + L+ L + VIA+G+E+ Q Sbjct: 717 GHSSLSYLKLFPLDHLKIDRSFISDIEHDANDTMIVAAAVSLAHNLGLSVIAEGVESAVQ 776 Query: 317 AGYMIERGVKYLKGIALSSPLPADAFVRKLLA 348 + E G L+G S P+ AD L + Sbjct: 777 VARLRELGCDELQGFHFSRPVTADVVENLLRS 808 >UniRef50_B1M2C0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylobacterium radiotolerans JCM 2831 RepID=B1M2C0_METRJ Length = 703 Score = 344 bits (883), Expect = 3e-93, Method: Composition-based stats. Identities = 57/333 (17%), Positives = 121/333 (36%), Gaps = 11/333 (3%) Query: 22 PCLLSEIEIELLSQLLKGYSVNEISKRRNRSIKTVSCQK-MKLYKKLNVKSDLTLWRDVF 80 P + L++ + + + S+ + L ++DL L R Sbjct: 361 PARAETLAARLIAAVQAPIPFGKRRLKVGLSVGIAQAPSHGFDSETLFRRADLALHRAKT 420 Query: 81 LRFKAYLQPKNIICDNFNSSV-----LPVVSSKGESMAHYNIYYQPIYNAKNGNIAGCDV 135 + + + L + +YYQP + G + G + Sbjct: 421 EGR----NTHRVFEPAMDEAEAARRDLERDLRQAIEGDELILYYQPQVSTGTGRLLGFEA 476 Query: 136 TIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINKLFSPIKNNLPHGFFITININPED 195 + ++ + I + L + + H + +N++P Sbjct: 477 LVRWEHPTRG-LVPPNAFIPLAEESGLILPLGEWVLRAACREAARWAHPLKVAVNLSPRQ 535 Query: 196 ILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSLRRIRNNNVYLSLNDFG 255 D+ L + G RL L+ + + + R LRR++ V ++++DFG Sbjct: 536 FQQADLPERVLAILTETGLAPTRLELEITETLIINDMARALGILRRLKAFGVSIAMDDFG 595 Query: 256 MGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSKQLHIDVIADGIETKK 315 GY+ L+ LQ PF + + ++ +E + +I ++ L + L + V+A+G+ET Sbjct: 596 TGYSSLATLQAFPFDKIKIDRSFVGHVEVSPQAAVIVRAVLGLGRSLGMSVVAEGVETDA 655 Query: 316 QAGYMIERGVKYLKGIALSSPLPADAFVRKLLA 348 Q ++ +G +S P P + F ++ A Sbjct: 656 QMRFLAAEACDEAQGYLISKPQPIERFAEQIDA 688 >UniRef50_C4KA21 Diguanylate cyclase/phosphodiesterase with Chase sensor n=1 Tax=Thauera sp. MZ1T RepID=C4KA21_THASP Length = 1093 Score = 344 bits (883), Expect = 3e-93, Method: Composition-based stats. Identities = 60/344 (17%), Positives = 131/344 (38%), Gaps = 10/344 (2%) Query: 9 NLIDYDSIVNIEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIKT-VSCQKMKLYKKL 67 +I + + E P ++E +L L + ++ R SI + L Sbjct: 746 FVILLSRLAHAEEPARVAER---VLDALARPLQIDSQPLRVGASIGIALYPADGGEIDTL 802 Query: 68 NVKSDLTLWRDVFLRFKAYLQPK-NIICDNFNSSVLPVVSSKGESMAHYNIYYQPIYNAK 126 +D ++ AY + K ++YQP +A Sbjct: 803 LKHADTAMYEAKESGRNAYRFFLPEMTQRVTRRLQTEAELRKAIESGDLRLHYQPQIDAA 862 Query: 127 NGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINKLFS----PIKNNLP 182 +G + GC+ + ++ + D + + + L + + ++ Sbjct: 863 SGRVYGCEALVRWQHPERGLLPPD-RFVPFAEQSGLIVPLGEWVLREACLQQVRWRDAGL 921 Query: 183 HGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSLRRI 242 + +NI+ D + G + R+ L+ + + +S ++ Sbjct: 922 PPLDVAVNISALQFRRRDFVATVARVLGETGADPARIELEITESALMDATPELVASFDQL 981 Query: 243 RNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSKQL 302 + L+L+DFG GY+ LS+L+ +P + + ++ + N I + + L++ L Sbjct: 982 VALGLTLALDDFGTGYSSLSYLKRLPLRRLKIDRSFVDGLPDNPEDAAITSATLSLARDL 1041 Query: 303 HIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKL 346 ++V+A+G+ET+ Q GY+ +RG + ++G S PL + F Sbjct: 1042 GMEVVAEGVETEDQRGYLCKRGCRAMQGYLFSRPLGVEEFGTWF 1085 >UniRef50_C6NZ79 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6NZ79_9PROT Length = 923 Score = 344 bits (883), Expect = 3e-93, Method: Composition-based stats. Identities = 63/332 (18%), Positives = 140/332 (42%), Gaps = 11/332 (3%) Query: 28 IEIELLSQLLKGYSVNEISKRRNRSIKT-VSCQKMKLYKKLNVKSDLTLWRDVFLR---F 83 + +LL L Y ++ SI + + + L +D+ ++R F Sbjct: 593 VAQKLLIALATPYDLDGQVISTQASIGISIYPDQAQDADTLIKNADMAMYRAKEEGRNNF 652 Query: 84 KAYLQPKNIICDNFNSSVLPVVSSKGESMAHYNIYYQPIYNAKNGNIAGCDVTIALKNSD 143 + ++ N D S + + YQP + +G ++G + I + Sbjct: 653 QFFVPEMNFRVDLLFS--MEKDLRLALERGELFLQYQPQADLASGTLSGVEALIRWDHPV 710 Query: 144 GSAFALDSDRINYNPNDNKVSYLFGHINK----LFSPIKNNLPHGFFITININPEDILTC 199 + ++ I ++ + + + + + H I +N++ + Sbjct: 711 KGQVSP-AEFIPVAEETGQIVAIGEWVLRTACSQMAEWRKTGMHDLTIAVNLSIRQLRQP 769 Query: 200 DIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSLRRIRNNNVYLSLNDFGMGYA 259 D+ + G + L L+ + + + L +++ V LS++DFG G++ Sbjct: 770 DLAELIKSVLLETGLDARHLELEITEGIMMGDNQAAFRFLSEMQDLGVQLSIDDFGTGFS 829 Query: 260 ELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSKQLHIDVIADGIETKKQAGY 319 L++L+ +P + + + ++ DIE++ I +II L +L++ VIA+G+ET++Q + Sbjct: 830 SLNYLKQMPVNKLKIDQSFIRDIETDEGDAAIIRSIISLGHRLNLRVIAEGVETQEQLDF 889 Query: 320 MIERGVKYLKGIALSSPLPADAFVRKLLASLK 351 + RG ++G S PL A+ F+R + A + Sbjct: 890 LRIRGCDEIQGYFYSRPLLAEDFMRFVKAPPR 921 >UniRef50_C6NZD9 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6NZD9_9PROT Length = 1149 Score = 344 bits (882), Expect = 4e-93, Method: Composition-based stats. Identities = 53/328 (16%), Positives = 137/328 (41%), Gaps = 17/328 (5%) Query: 32 LLSQLLKGYSVNEISKRRNRSIKT-VSCQKMKLYKKLNVKSDLTLWR------DVFLRFK 84 L+ + + + + SI + + ++ L+ +D ++R + F F Sbjct: 825 LMEAVSQAFQFEQHELVATCSIGIAIYPHDGENFETLSKNADTAMYRVKHDGRNGFCFFT 884 Query: 85 AYLQPKNIICDNFNSSVLPVVSSKGESMAHYNIYYQPIYNAKNGNIAGCDVTIALKNSDG 144 + +Q + + L + +++YQP + ++G++ G + + ++ + Sbjct: 885 SEMQAHSA-----RTLQLGNALRHALTRGQLHLHYQPQISTQDGHVVGAEALLRWQHPEL 939 Query: 145 SAFALDSDRINYNPNDNKVSYLFGHINK-LFSPIKNNLPHGFF---ITININPEDILTCD 200 + + ++ I ++ ++ + + + +K+ + G + +N++ + Sbjct: 940 GSISP-AEFIPIAEDNGQIIPIGEWVLRTAIKQLKDWMDSGLPPMIMAVNLSAAQFRQSN 998 Query: 201 IERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSLRRIRNNNVYLSLNDFGMGYAE 260 + + L L+ + + + + ++ + +S++DFG GY+ Sbjct: 999 LMELVTSILDESKVPHRYLELELTEAVAMDDPQLAIGVMDKLHTGGIKMSIDDFGTGYSS 1058 Query: 261 LSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSKQLHIDVIADGIETKKQAGYM 320 LS+L+ + + ++ HDI + I II+++ L + IA+G+ET Q ++ Sbjct: 1059 LSYLKRFKVYKLKIDQSFVHDITDDPDDKAIVAAIINMASSLGMQTIAEGVETAGQLSFL 1118 Query: 321 IERGVKYLKGIALSSPLPADAFVRKLLA 348 +G ++G S PLPA+ FV L Sbjct: 1119 RLQGCNEVQGYYFSKPLPAEQFVSYLQK 1146 >UniRef50_A1WHK4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Comamonadaceae RepID=A1WHK4_VEREI Length = 836 Score = 344 bits (882), Expect = 4e-93, Method: Composition-based stats. Identities = 55/325 (16%), Positives = 137/325 (42%), Gaps = 19/325 (5%) Query: 34 SQLLKGYSVNEISKRRNRSIKT-VSCQKMKLYKKLNVKSDLTLWRDVFL------RFKAY 86 + L + Y++ SI + + +L ++DL +++ F Sbjct: 508 ASLGQPYALGGAVHHSTPSIGIALFGPQACRVDELLKQADLAMYQAKAAGRNTQRFFDPE 567 Query: 87 LQPKNIICDNFNSSVLPVVSSKGESMAHYNIYYQPIYNAKNGNIAGCDVTIALKNSDGSA 146 +Q + S L +G ++YQP+ + + G + G + + + Sbjct: 568 MQAAAS-----HRSALEADLRRGLQQRELVLHYQPMVDGQ-GRLQGAEALVRWNHPQRG- 620 Query: 147 FALDSDRINYNPNDNKVSYLFGHIN-----KLFSPIKNNLPHGFFITININPEDILTCDI 201 ++ + L + +L + ++ L F +++N++ D Sbjct: 621 LMPPAEFTPLAEQTGLILPLGQWVLETACAQLVAWSRSALTRAFSLSVNVSVRQFRQADF 680 Query: 202 ERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSLRRIRNNNVYLSLNDFGMGYAEL 261 ++ L ++ G RL ++ + L ++ + ++++R + + +L+DFG GY+ L Sbjct: 681 VQQLLATLEASGANPERLTIELTESLLLNDVQDIIARMQQLRCHGLGFALDDFGTGYSSL 740 Query: 262 SHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSKQLHIDVIADGIETKKQAGYMI 321 S L+ +P + + ++ D+ +++ I +I+ L++ L + V+A+G+ET+ Q ++ Sbjct: 741 SQLKRLPLDQIKIDRSFVRDLPADAGDGAIVRSILALAQSLGLAVVAEGVETRAQLEFLQ 800 Query: 322 ERGVKYLKGIALSSPLPADAFVRKL 346 G + +G P+P +A + Sbjct: 801 HHGCQTFQGYHFGRPMPPEALAHRF 825 >UniRef50_Q12GF0 Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) n=3 Tax=Polaromonas RepID=Q12GF0_POLSJ Length = 989 Score = 344 bits (882), Expect = 4e-93, Method: Composition-based stats. Identities = 67/334 (20%), Positives = 132/334 (39%), Gaps = 19/334 (5%) Query: 28 IEIELLSQLLKGYSVNEISKRRNRSIKTVSCQKMK-LYKKLNVKSDLTLW------RDVF 80 + ++L+ L + Y + SI + +L ++DL ++ R+ Sbjct: 661 VAEKVLATLREPYDLAGYQHYSTSSIGVTPFNARQGSVSELLKQADLAMYQAKTMGRNTV 720 Query: 81 LRFKAYLQPKNIICDNFNSSVLPVVSSKGESMAHYNIYYQPIYNAKNGNIAGCDVTIALK 140 F +Q ++ L G + ++YQP + + I G + + K Sbjct: 721 CFFDPDMQASVS-----ANAALSTDLRAGLREHQFLVHYQPQVD-REQRITGVEALLRWK 774 Query: 141 NSDGSAFALDSDRINYNPNDNKVSYLFGHINKLFS-----PIKNNLPHGFFITININPED 195 + + ++ I + L + + K G I +N++ Sbjct: 775 HPQRGMVSP-AEFIPVAEETGLILPLGQWVLEQACLQLAVWQKRPETAGLSIAVNVSVRQ 833 Query: 196 ILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSLRRIRNNNVYLSLNDFG 255 D + IK G + L L+ + + + + ++ V L+L+DFG Sbjct: 834 FRHPDFVDMVMAAIKHTGIQPHNLKLELTESLLADRMEIAIAKMGTLKALGVTLALDDFG 893 Query: 256 MGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSKQLHIDVIADGIETKK 315 MGY+ LS+L+ +P + + K+ D+ S+ I + II L++ L +DVIA+G+ET+ Sbjct: 894 MGYSSLSYLKRLPLDQLKIDKSFIADVFSDPNDAAICSAIISLAQSLGLDVIAEGVETEA 953 Query: 316 QAGYMIERGVKYLKGIALSSPLPADAFVRKLLAS 349 Q ++ G Y +G PLP F + + Sbjct: 954 QRSFLAGLGCGYYQGFLFCPPLPIAEFEAFMQGA 987 >UniRef50_B9Z1R5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z1R5_9NEIS Length = 1086 Score = 344 bits (882), Expect = 4e-93, Method: Composition-based stats. Identities = 62/346 (17%), Positives = 131/346 (37%), Gaps = 17/346 (4%) Query: 18 NIEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIK-TVSCQKMKLYKKLNVKSDLTLW 76 + LS + ++L+ L + + S+ +V + L +D+ ++ Sbjct: 736 HFASQATLSTLAEDILAVLAQPLWLEGQELIVTGSLGISVYPHDGSDARTLLKNADVAMY 795 Query: 77 RDV------FLRFKAYLQPKNIICDNFNSSVLPVVSSKGESMAHYNIYYQPIYNAKNGNI 130 R + F A + + I L + + +++QPI A + Sbjct: 796 RAKEAGKNTYQFFAAEMNAQAI-----ERLQLERGLRQALERGEFELHFQPIVAAATYRL 850 Query: 131 AGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGH-INKLFSPIKNNLPHGFFI-- 187 +V + ++ + + I + + I + + G + Sbjct: 851 EALEVLLRWRHPELGLVSP-VRFIPLAEETGLIRPIGDWVIRQACRQLAEWDCLGLHVPR 909 Query: 188 -TININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSLRRIRNNN 246 IN++ + + + G RL L+ + + S L ++ Sbjct: 910 LAINLSARQFEQQGLIMQVAGALAEAGIAAGRLELEMTESMVMQNPSEAVSLLGELKALG 969 Query: 247 VYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSKQLHIDV 306 V LS++DFG GY+ LS+L+ P + + ++ + + IA I+ ++++L V Sbjct: 970 VRLSIDDFGTGYSSLSYLKRFPLDTLKIDRSFIEGLPGDGDNAAIAEAILAMARKLSFSV 1029 Query: 307 IADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLLASLKQ 352 +A+G+ET+ QA ++ +G + L+G S PLPA L Q Sbjct: 1030 VAEGVETEAQAAFLCAKGCQLLQGYLFSRPLPAAELPAFLQQRSPQ 1075 >UniRef50_Q0BFB8 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=5 Tax=Burkholderia RepID=Q0BFB8_BURCM Length = 860 Score = 343 bits (881), Expect = 6e-93, Method: Composition-based stats. Identities = 60/342 (17%), Positives = 135/342 (39%), Gaps = 7/342 (2%) Query: 16 IVNIEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIK-TVSCQKMKLYKKLNVKSDLT 74 +VN+ I ++L ++ ++++E S+ ++ + L +D Sbjct: 353 LVNLATQADADVIARKILDTFIEPFTLDEHDLHVTTSVGVSLCPTDGTNAETLLKTADAA 412 Query: 75 LWRDVFLRFKAY-LQPKNIICDNFNSSVLPVVSSKGESMAHYNIYYQPIYNAKNGNIAGC 133 L+ Y + + ++L + + +YYQP + K G I+G Sbjct: 413 LYAAKEHGRNCYRFYTRELGARVEEQTILENALHQAVANHELELYYQPKVDLKTGQISGV 472 Query: 134 DVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINKLFS----PIKNNLPHGFFITI 189 + I + G I + + + + + + I + Sbjct: 473 EALIRWRRP-GIGVIPPDRFIPIAEDCGLILPIGEWVLRTACMQAVAWRREGHPPIRIAV 531 Query: 190 NINPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSLRRIRNNNVYL 249 N++ D+ ++ G L L+ + + +LR ++ V L Sbjct: 532 NLSARQFRQQDVAAMVRTTLEETGLAPDSLELELTESVLMQDCNAIAHTLRELKALGVVL 591 Query: 250 SLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSKQLHIDVIAD 309 SL+DFG GY+ LS+L+++P V + ++ D+ +++ + +II +++ LH++ +A+ Sbjct: 592 SLDDFGTGYSSLSYLKDLPIDVVKIDRSFLDDVTTSAEGASLTRSIIAMAESLHMETVAE 651 Query: 310 GIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLLASLK 351 G+ET+ Q ++ ++G S P+ D L A + Sbjct: 652 GVETEAQLSFLNRHRCHAMQGYYFSHPVTGDEIADMLSAGSQ 693 >UniRef50_C1DB08 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1DB08_LARHH Length = 1092 Score = 343 bits (880), Expect = 6e-93, Method: Composition-based stats. Identities = 54/352 (15%), Positives = 133/352 (37%), Gaps = 27/352 (7%) Query: 19 IEFPCL-----LSEIEIELLSQLLKGYSVNEISKRRNRSIKTVSCQKMKLYKKLNVKSDL 73 + P L L ++ +LL+ + ++ + R S+ ++ + D Sbjct: 744 LVLPGLSDCVVLEQLAEQLLADVSSPILLDGLDLRVTPSLGV------AVFPRDGNDCDA 797 Query: 74 TLWRDVFLRFKAYLQPKNIICDNFNSSV---------LPVVSSKGESMAHYNIYYQPIYN 124 L + A + +N F + + + ++YQP + Sbjct: 798 LLRHADAALYHAKSRGRNTY-RFFTREIDDRVSEYLHIEHGLRSALERGEFELHYQPQVD 856 Query: 125 AKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVS----YLFGHINKLFSPIKNN 180 G + G + + K+ + + + + ++ + + Sbjct: 857 MAFGRVVGVEALLRWKHPEQGMISP-VRFVPIAEETGLIVPIGMWVIREACRQAMLWRRA 915 Query: 181 LPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSLR 240 + +N++ + + + G + L ++ + + + + L Sbjct: 916 GLRPMTMAVNLSGRQF-SRSVIEAIDEALADSGLDPRWLQVEVTESVIMEDTQEAYTVLE 974 Query: 241 RIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSK 300 +R + ++++DFG GY+ L++L+ P + + ++ DI+ + +I II ++ Sbjct: 975 ALRARGLTVAVDDFGTGYSSLAYLKRFPIDKLKIDRSFIRDIDLDEDNPVIVDAIIGMAH 1034 Query: 301 QLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLLASLKQ 352 L I V+A+G+ET+ Q Y+ ++G ++G +S P PA A + +L Q Sbjct: 1035 NLRIKVLAEGVETRAQWDYLRQQGCDEVQGYLVSRPQPAAALGQWMLERGMQ 1086 >UniRef50_A1TI51 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=15 Tax=cellular organisms RepID=A1TI51_ACIAC Length = 1499 Score = 343 bits (880), Expect = 7e-93, Method: Composition-based stats. Identities = 64/341 (18%), Positives = 132/341 (38%), Gaps = 14/341 (4%) Query: 20 EFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIKTVSCQKMKLYK--KLNVKSDLTLWR 77 E + ++L+ L Y + R SI + +L ++DL +++ Sbjct: 1160 ELAMSARTVGEKILAVLATPYVLQGYHYRSTPSIGVAPFGDGRTSTVGELLKQADLAMYQ 1219 Query: 78 D---VFLRFKAYLQPKNIICDNFNSSVLPVVSSKGESMAHYNIYYQPIYNAKNGNIAGCD 134 + + + + L + + ++YQP + + G++ G + Sbjct: 1220 AKTAGRNTLRFFDPGMQAVVTA--RAELENDLRTALAREQFMLHYQPQID-RRGSVTGVE 1276 Query: 135 VTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINKLFSPIKNNLPH-----GFFITI 189 + + + + I V L + H + + Sbjct: 1277 ALVRWPHPQRGMVSP-GEFIPLAEETGLVLPLGRWVLHTACAQLARWQHVPGRGHLSMAV 1335 Query: 190 NINPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSLRRIRNNNVYL 249 N++ + + I G RL L+ + + + +++ +R++ V Sbjct: 1336 NVSSRQFHHEAFVEDVVRAITATGAPASRLKLELTESLFVEDMETTIATMAALRSHGVGF 1395 Query: 250 SLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSKQLHIDVIAD 309 SL+DFG GY+ LS+L+ +P + + ++ D+ ++ I TII LS+ L +DVIA+ Sbjct: 1396 SLDDFGTGYSSLSYLKRMPLDQLKIDQSFVRDLLADPNDAAIVDTIIALSRSLGLDVIAE 1455 Query: 310 GIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLLASL 350 G+ET +Q + + G + +G S PLP A L+ L Sbjct: 1456 GVETAEQRTRLEQAGCRAYQGYFFSRPLPETALEDFLVQKL 1496 >UniRef50_B2T9B2 Diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(S) n=2 Tax=Burkholderiales RepID=B2T9B2_BURPP Length = 1037 Score = 342 bits (879), Expect = 8e-93, Method: Composition-based stats. Identities = 58/324 (17%), Positives = 125/324 (38%), Gaps = 10/324 (3%) Query: 30 IELLSQLLKGYSVNEISKRRNRSIKTVSCQKMKLY-KKLNVKSDLTLWRDVFLRFKA-YL 87 +L+ L Y + +I R + SI + + +L ++DL +++ A Sbjct: 704 ERILAVLGSPYHLGKIEYRTSASIGATVFRGHQASIDELLKQADLAMYKSKERGRNAVRF 763 Query: 88 QPKNIICDNFNSSVLPVVSSKGESMAHYNIYYQPIYNAKNGNIAGCDVTIALKNSDGSAF 147 ++ + L + ++YQ + G + + ++ Sbjct: 764 FDPDMQTVVVQRAALEAGLRNAIEDNQFLLHYQAQV-VGT-RVTGAEALVRWQHPQRG-I 820 Query: 148 ALDSDRINYNPNDNKVSYLFGHINKLFSPIKNNLPH-----GFFITININPEDILTCDIE 202 ++ I + L + + I +N++ + D Sbjct: 821 VPPAEFIPLAEETGLIVALGSWVLEAACAQLARWAARPDMAHLTIAVNVSVQQFRKADFV 880 Query: 203 RECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSLRRIRNNNVYLSLNDFGMGYAELS 262 L I G RL L+ + + ++ + ++ + +L+DFG+GY+ LS Sbjct: 881 DNVLTIIGRTGARPDRLKLELTESVLVDNVQDIIEKMSALKAKGIVFALDDFGIGYSSLS 940 Query: 263 HLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSKQLHIDVIADGIETKKQAGYMIE 322 +L+ +P + + ++ D+ +S +IA TI+ L++ L + VIA+G+ET+ Q ++ Sbjct: 941 YLKRLPLDQLKIDRSFVRDVLVDSNDAVIARTIVALARSLGLGVIAEGVETEAQRDFLAA 1000 Query: 323 RGVKYLKGIALSSPLPADAFVRKL 346 G +G PLP + F L Sbjct: 1001 AGCYAYQGYYFCRPLPIEDFEALL 1024 >UniRef50_B1XXA0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Leptothrix cholodnii SP-6 RepID=B1XXA0_LEPCP Length = 771 Score = 342 bits (879), Expect = 8e-93, Method: Composition-based stats. Identities = 62/330 (18%), Positives = 123/330 (37%), Gaps = 13/330 (3%) Query: 25 LSEIEIELLSQLLKGYSVNEISKRRNRSIKTVS-CQKMKLYKKLNVKSDLTLWR------ 77 +S +L L + + SI Q +L +DL L+ Sbjct: 415 ISATAQRILDALREPCAALGAQVPVRLSIGIARFAQDGASVDELMQHADLALYDAKASAP 474 Query: 78 DVFLRFKAYLQPKNIICDNFNSSVLPVVSSKGESMAHYNIYYQPIYNAKNGNIAGCDVTI 137 F + + VL + +++YQP + + + G + + Sbjct: 475 GSMKFFAPRMGEQVR-----RRLVLERDLREAIDKQQLSLHYQPKVDLQTWEVTGFEALL 529 Query: 138 ALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINKLFSPIKNNLPHGFFITININPEDIL 197 ++ + S+ I + + + + P + INI+P ++ Sbjct: 530 RWRHPEHGNI-PPSEFIPVAEDSGLILPIGEWVLTQACQQAARWPAPMQVAINISPVQVM 588 Query: 198 TCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSLRRIRNNNVYLSLNDFGMG 257 ++ +K G RL L+ + + R L +R V ++L+DFG G Sbjct: 589 AQNLPEAVGRALKASGLAPRRLELEITESVFINETRGTVDRLHALRKVGVQIALDDFGTG 648 Query: 258 YAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSKQLHIDVIADGIETKKQA 317 Y+ L++L+ PF + + + ++ + I I+ L+K L + +A+G+E QA Sbjct: 649 YSSLAYLRRFPFDTLKIDRAFVREVLLSRDARAIVRNILALAKSLRMSTVAEGVEEPAQA 708 Query: 318 GYMIERGVKYLKGIALSSPLPADAFVRKLL 347 + G ++G +S P+PAD LL Sbjct: 709 SVLGNEGCDLVQGFLVSRPMPADEVTGFLL 738 >UniRef50_Q5P4K8 Putative sensory box/GGDEF family protein n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5P4K8_AZOSE Length = 698 Score = 342 bits (879), Expect = 8e-93, Method: Composition-based stats. Identities = 49/330 (14%), Positives = 123/330 (37%), Gaps = 13/330 (3%) Query: 25 LSEIEIELLSQLLKGYSVNEISKRRNRSIKTVSCQKMKLYKKLNVKSDLTLWRDVFLRFK 84 L+ IE ++E + + + + + L + ++ L ++ Sbjct: 359 LASIEDAARLAAKLRDRLSESVRIGSLELPLSASIGVALAPRDGRDPEMLLKNADIAMYR 418 Query: 85 AYLQPKNIICDN--------FNSSVLPVVSSKGESMAHYNIYYQPIYNAKNGNIAGCDVT 136 A + +N C + + + +YQP + G + G + Sbjct: 419 AKERGRNNYCFYGPEMDHHARRRLTVESELRRALAGGELEAHYQPQVDLATGALTGAEAL 478 Query: 137 IALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINKLFSP----IKNNLPHGFFITININ 192 + ++ + L + I + L + + + + +N++ Sbjct: 479 VRWRHPE-RCLLLPGEFIAVAEETGLIVPLGEQVLRAACRQSTRWREAGRPDLKVAVNLS 537 Query: 193 PEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSLRRIRNNNVYLSLN 252 D+ + + G +L L+ + + ++L +R + L+++ Sbjct: 538 GHQFRQHDLVEQVCDILAETGAHAAQLELEITESVAMADADGSVATLAGLRRQGIALAID 597 Query: 253 DFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSKQLHIDVIADGIE 312 DFG GY+ LS+L+ P + + ++ I ++ I II +++ L + ++A+G+E Sbjct: 598 DFGTGYSSLSYLKRFPIDTLKIDRSFIQGIPADGDDTAIVQAIIAMARSLRLSLLAEGVE 657 Query: 313 TKKQAGYMIERGVKYLKGIALSSPLPADAF 342 T Q +++ +G + +G +PA+ F Sbjct: 658 TPAQREFLVAQGCRSGQGFLFGRAMPAEDF 687 >UniRef50_C4L987 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Tolumonas auensis DSM 9187 RepID=C4L987_TOLAT Length = 1098 Score = 342 bits (879), Expect = 1e-92, Method: Composition-based stats. Identities = 63/347 (18%), Positives = 137/347 (39%), Gaps = 10/347 (2%) Query: 5 KIKLNLIDYDSIVNIEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIKTVSCQKMKLY 64 + + L + S ++ L+E I L Q + E+ + I ++ + Sbjct: 735 EFTVLLQNNPSPDDVSL---LAERIIHALHQPFLLSNAREVMIGTSIGI-SLYPEHGSTA 790 Query: 65 KKLNVKSDLTLWRDVFLRFKAYLQ-PKNIICDNFNSSVLPVVSSKGESMAHYNIYYQPIY 123 ++L ++D ++R Y + + L + + + ++YQP Sbjct: 791 EELMQQADTAMYRAKHDGRDGYRYFSEELFLKAKARLELEQRLHRAITGQEFKVFYQPQI 850 Query: 124 NAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHI----NKLFSPIKN 179 + K I G + + + + S+ I+ + + + + + Sbjct: 851 SIKTNQIIGAEALLRWDDPEYGLI-PPSEFISVAEETGLIQNIGEWVLYETCRQGRDWLD 909 Query: 180 NLPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSL 239 + +N++P + D+ + + G L L+ + + L Sbjct: 910 QHLPPINLAVNLSPLQLHHGDVRQLIGTILHNSGFPAHHLELELTESALMEQQEETVKIL 969 Query: 240 RRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLS 299 + +R + ++++DFG GY+ L++L+ P + + K DI IA TI+ + Sbjct: 970 QGLRQQGIRIAIDDFGTGYSSLAYLKQFPLDVLKIDKRFVEDIPHERDDMEIAATIVAMG 1029 Query: 300 KQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKL 346 L + V+A+G+ETK Q ++ ++G Y +G S PLPA+ F + L Sbjct: 1030 HSLRLTVLAEGVETKAQLEFLEQQGCDYYQGYLYSMPLPAEEFAQLL 1076 >UniRef50_B1M4V3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Rhizobiales RepID=B1M4V3_METRJ Length = 777 Score = 342 bits (878), Expect = 1e-92, Method: Composition-based stats. Identities = 71/333 (21%), Positives = 138/333 (41%), Gaps = 9/333 (2%) Query: 24 LLSEIEIELLSQLLKGYSVNEISKRRNRSIKTVSCQKMKLYKKLNVKSDLTLWR---DVF 80 + + ++ L ++++ I + SI + +++ ++DL L+R + Sbjct: 443 AIEALANGIVEALASPFTIDGIRLTVSVSIGIAIAPQDGC-QEIMRRADLALYRMKSEGR 501 Query: 81 LRFKAYLQPKNIICDNFNSSVLPVVSSKGESMAHYNIYYQPIYNAKNGNIAGCDVTIALK 140 ++ Y + + L + +Y+QPI AK + G + I K Sbjct: 502 NGYRFYEAEMDERIEARR--ALTADLRGALDRDEFVLYFQPIVAAKECRVRGFEALIRWK 559 Query: 141 NSDGSAFALDSDRINYNPNDNKVSYLFGHINKLFSPIKNNLPHGFFITININPEDILTCD 200 + + + I + L I + I P I +N++P D Sbjct: 560 HPVRGFVSP-GEFIPLAEETGVIIPLGEWILREACRIAAGWPGDVRIAVNLSPRQFRHSD 618 Query: 201 IERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSLRRIRNNNVYLSLNDFGMGYAE 260 + + ++ G RL L+ + L ++L ++R V LSL+DFG GY+ Sbjct: 619 LTQLVRSALRTSGLAAARLELEVTESVFLEATPAINATLSKLREMGVRLSLDDFGTGYSS 678 Query: 261 LSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSKQLHIDVIADGIETKKQAGYM 320 LS+L+ I F + + ++ D+ I + IID++ L + + A+G+ET Q + Sbjct: 679 LSYLRRIAFDKIKIDQSFVRDLPQERGAAAIVSAIIDMATSLDMTITAEGVETDAQRACL 738 Query: 321 IERGVKYLKGIALSSPLPADAFVRKLLASLKQV 353 +E+G +G S PLPA+ LA +Q+ Sbjct: 739 LEQGCHEFQGYLFSKPLPAEQAAA--LARSRQL 769 >UniRef50_A3DCG7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Clostridium thermocellum RepID=A3DCG7_CLOTH Length = 862 Score = 342 bits (878), Expect = 1e-92, Method: Composition-based stats. Identities = 60/322 (18%), Positives = 128/322 (39%), Gaps = 7/322 (2%) Query: 32 LLSQLLKGYSVNEISKRRNRSIKT-VSCQKMKLYKKLNVKSDLTLWRDVFLRFKAY-LQP 89 +L + + + + S+ + + + + +D L+R L Y L Sbjct: 529 ILKKFQQPWILEGKEYYITASMGIGIYPNGGEDPQTIFKNADTALYRAKELGRNNYQLYT 588 Query: 90 KNIICDNFNSSVLPVVSSKGESMAHYNIYYQPIYNAKNGNIAGCDVTIALKNSDGSAFAL 149 +++ + + + ++YQP + K G I G + + + D Sbjct: 589 ESMNQKVLQRLDIENSLRRAIEKEEFVLFYQPQIDIKTGKIVGFEALLRWYHPDYG-LMP 647 Query: 150 DSDRINYNPNDNKVSYLFGHINKLFSPIKNNLPH----GFFITININPEDILTCDIEREC 205 + I + + + + + I++N++ +I Sbjct: 648 PMEFIPVAEDSGLIVVIGEWVLETACRQNKKWIECGLEPHLISVNLSARQFQRSNIVEVI 707 Query: 206 LHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSLRRIRNNNVYLSLNDFGMGYAELSHLQ 265 G L L+ + + + L ++R + +SL+DFG GY+ L++L+ Sbjct: 708 DRIRSSTGLAPELLELEITESTAMQDLSFTIDVLNQLRKKGIRVSLDDFGTGYSSLNYLR 767 Query: 266 NIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSKQLHIDVIADGIETKKQAGYMIERGV 325 +P + + K+ DI +NS + IA T+I L+ +L + V+A+G+ETK+Q ++ + Sbjct: 768 QLPIDTLKIDKSFVQDIRANSKEEAIAKTVISLAHKLDLTVVAEGVETKEQLLFLKKEKC 827 Query: 326 KYLKGIALSSPLPADAFVRKLL 347 +G S PLPA+ + L Sbjct: 828 DKAQGYLFSKPLPAEEIEKMLR 849 >UniRef50_Q1K1R0 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1K1R0_DESAC Length = 709 Score = 342 bits (878), Expect = 1e-92, Method: Composition-based stats. Identities = 63/349 (18%), Positives = 133/349 (38%), Gaps = 20/349 (5%) Query: 9 NLIDYDSIVNIEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIKTVSCQKMKLYKKLN 68 LI D N+ ++++ + LS + + SI + Sbjct: 360 FLITLDPADNLS---EVTQLAQKFLSVISVPMKIEHHRFHLTASIGISLFPGDATSPEKL 416 Query: 69 VKS-DLTLWR------DVFLRFKAYLQPKNIICDNFNSSVLPVVSSKGESMAHYNIYYQP 121 + D ++R D F +K ++ K L ++YQP Sbjct: 417 LSCADSAMYRAKESGRDAFRFYKPHMNEKAQGLL-----WLETELRLAIEQEQLELHYQP 471 Query: 122 IYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHI----NKLFSPI 177 Y+ G + G + + + + + I + + L + + + Sbjct: 472 QYDLNTGQLVGMEALVRWNHPEKGMI-PPGEFIPQAEETSLIIPLGEWVLNTACRQIAAW 530 Query: 178 KNNLPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQS 237 + +NI+ D+ + + +G L L+ + + + Sbjct: 531 HAMGISPIRMAVNISAVQFYRIDLAQMVAKLLDHYGLPATLLELEITESVLMDDVEAAAE 590 Query: 238 SLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIID 297 ++ ++ + LS++DFG GY+ LS+L+ P S + + ++ +D+ N IA +II Sbjct: 591 TMNKLTAMGIQLSIDDFGTGYSSLSYLKRFPISTLKIDRSFINDVTINEQDAAIALSIIS 650 Query: 298 LSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKL 346 L+ + I+V+A+G+ET +Q ++ +Y +G + PLPA R+L Sbjct: 651 LAGHMGIEVLAEGVETVEQLSFLQRHACQYGQGYLFNRPLPAKDIERQL 699 >UniRef50_Q98BI1 Mll5564 protein n=2 Tax=Mesorhizobium RepID=Q98BI1_RHILO Length = 514 Score = 342 bits (877), Expect = 1e-92, Method: Composition-based stats. Identities = 59/324 (18%), Positives = 138/324 (42%), Gaps = 7/324 (2%) Query: 20 EFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIKTVSCQKMKLYKKL-NVKSDLTLWR- 77 + + + L+ ++++ Y ++ + + S+ V+ K + L +S+L L Sbjct: 174 QIQGTMESMVERLIDEMMEPYELSTHQQSVSLSVGIVAMPKDGVDPVLILRRSNLALQNA 233 Query: 78 --DVFLRFKAYLQPKNIICDNFNSSVLPVVSSKGESMAHYNIYYQPIYNAKNGNIAGCDV 135 + + + D + + ++++YQP + G I G + Sbjct: 234 RAGGVGNWSVFDSEMGRVAD--HRQWVESELHTAFERGDFDLHYQPQLDLPTGRIIGYEA 291 Query: 136 TIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINKLFSPIKNNLPHGFFITININPED 195 I + + + I ++ + + + ++LP F+ +NI+P Sbjct: 292 LIRWNHPERGMI-PPMEFIQIAEETGMINPIGEWVLRKACSDAHHLPDDCFVAVNISPVQ 350 Query: 196 ILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSLRRIRNNNVYLSLNDFG 255 +T D ++ G + RL L+ + + R + L+ + + ++++DFG Sbjct: 351 FMTKDFVGIVRDTMRATGIKPSRLELEVTETAMMQDRDRAAAILKELAEMGISVAVDDFG 410 Query: 256 MGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSKQLHIDVIADGIETKK 315 GY+ LS+L + F + + ++ I ++S + + +TI+ LS+ L + +IA+G+ET+ Sbjct: 411 TGYSNLSYLIDFSFGKLKIDRSFVSRIGTDSSSGAVVSTIVGLSRALGVSIIAEGVETES 470 Query: 316 QAGYMIERGVKYLKGIALSSPLPA 339 QA + G + ++G P P Sbjct: 471 QATLLRAAGCEVVQGYLFGRPAPL 494 >UniRef50_C9Y8E7 Putative uncharacterized protein n=1 Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9Y8E7_9BURK Length = 633 Score = 342 bits (877), Expect = 1e-92, Method: Composition-based stats. Identities = 58/337 (17%), Positives = 142/337 (42%), Gaps = 7/337 (2%) Query: 19 IEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIKT-VSCQKMKLYKKLNVKSDLTLWR 77 ++ P ++++ ++L ++ + + I + SI + Q + +L +DL ++ Sbjct: 288 LQHPDAVAKVSQDILQKMQAPFQLRGIEVLASCSIGIALYPQHGNSFDELMRHADLAMYH 347 Query: 78 DVFLRFKAYLQPKNIICDNFNSSV-LPVVSSKGESMAHYNIYYQPIYNAKNGNIAGCDVT 136 + I + S+ L + + + ++YQP+Y+ +G + G + Sbjct: 348 AKEAGRNTFRFFSEDIRSSVTESLHLISSLRQAVTQEEFVLHYQPVYDLHSGRLLGAEAL 407 Query: 137 IALKNSDGSAFALDSDRINYNPNDNKVSYLFGHI----NKLFSPIKNNLPHGFFITININ 192 + +N + I + + + + + F+++N++ Sbjct: 408 VRWQNPKLGMVSP-GLFITLAEKSGLIVDIGQWVLTEACRQMQAWRQQGATDLFVSVNLS 466 Query: 193 PEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSLRRIRNNNVYLSLN 252 P ++E ++ G + +L L+ + ++ ++ ++L RI+++ + +S++ Sbjct: 467 PVQFSRGNVEAVIAQALRETGLDPRQLELEVTESTLIHDTEKFITTLGRIQHSGIRMSID 526 Query: 253 DFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSKQLHIDVIADGIE 312 DFG GY+ LS+LQ P + + ++ + + + II L+K L + V A+G+E Sbjct: 527 DFGTGYSNLSYLQRFPVHKLKIDQSFVRRLMQGQKDVAMVSAIIHLAKSLQLTVTAEGVE 586 Query: 313 TKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLLAS 349 + + G +G + P+PA F LA Sbjct: 587 NEATREALTRMGCDQAQGYLFARPMPAKDFEAYWLAR 623 >UniRef50_Q74A79 Sensory box/GGDEF family protein n=1 Tax=Geobacter sulfurreducens RepID=Q74A79_GEOSL Length = 873 Score = 342 bits (877), Expect = 1e-92, Method: Composition-based stats. Identities = 55/326 (16%), Positives = 121/326 (37%), Gaps = 17/326 (5%) Query: 35 QLLKGYSVNEISKRRNRSIK-TVSCQKMKLYKKLNVKSDLTLW------RDVFLRFKAYL 87 L + + S+ ++ + L K+D ++ R+ F F + Sbjct: 543 LLAMPFFLGGREIFITASMGISLFPDDGDTMEALIKKADTAMYHIKESGRNSFQFFAEEM 602 Query: 88 QPKNIICDNFNSSVLPVVSSKGESMAHYNIYYQPIYNAKNGNIAGCDVTIALKNSDGSAF 147 K + + ++YQP G + G + + + D Sbjct: 603 NQKVN-----ARLTIETGLRRALEKGEMLLHYQPRLEPGTGAVVGMEALVRWNSPDMGLI 657 Query: 148 ALDSDRINYNPNDNKVSYLFGHI----NKLFSPIKNNLPHGFFITININPEDILTCDIER 203 + +D I + + + + +++NI+ + D Sbjct: 658 SP-ADFIPIAEDSGLIVEIGDWVLATACCQALEWHRMGHDSLRVSVNISARQFVGHDFVD 716 Query: 204 ECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSLRRIRNNNVYLSLNDFGMGYAELSH 263 + I+ G + L+ + + + + R+R + +S++DFG GY+ L++ Sbjct: 717 RVVRIIEQSGLSPHFVELELTETALTHNVDETVKIMNRLRERGITISIDDFGTGYSSLNY 776 Query: 264 LQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSKQLHIDVIADGIETKKQAGYMIER 323 L+ P + + K+ D+ I TII ++ +H+ V+A+G+ET +Q ++E Sbjct: 777 LKRFPVDVLKIDKSFIDDMVKRREDAAIVATIIGIAHHMHMKVVAEGVETAEQMKLLMEG 836 Query: 324 GVKYLKGIALSSPLPADAFVRKLLAS 349 + ++G S PLP + F R + Sbjct: 837 NCEEIQGFYFSRPLPPEEFERYIAGR 862 >UniRef50_Q1K3I2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1K3I2_DESAC Length = 791 Score = 342 bits (877), Expect = 2e-92, Method: Composition-based stats. Identities = 56/313 (17%), Positives = 136/313 (43%), Gaps = 20/313 (6%) Query: 43 NEISKRRNRSIKTVSCQKMKLYKKLNVKSDLTLWRDVFL------RFKAYLQPKNIICDN 96 +E+ + I +++ + K+L +++ +++ L + A + + Sbjct: 476 HELFITPSMGI-SIAPTDTQHPKELLAFAEIAMYQAKGLGGNKCQFYTAEMNSRAK---- 530 Query: 97 FNSSVLPVVSSKGESMAHYNIYYQPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINY 156 L K + + +YYQP ++ ++G + GC+ + ++ + +D I Sbjct: 531 -TRIELESYLRKAVNQDQFVLYYQPQFDIQSGELVGCEALLRWQHPQMGMISP-NDFIPL 588 Query: 157 NPNDNKVSYLFGHINKLFS----PIKNNLPHGFFITININPEDILTCDIERECLHFIKVF 212 + + + + ++ + +NI+P ++ Sbjct: 589 AEETGVIIEIGEWVLQEACLQNKKWQDAGHSPIRVAVNISPRQFREPGFLEMIERVVQTT 648 Query: 213 GTERIRLVLQFSTKEELYIIRRYQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYV 272 G + L L+ + + I + L++++ ++L+++DFG GY+ LS+L+ P S + Sbjct: 649 GIKPEWLELEITESLLMDDIDSAINILKQLKAKGIHLAIDDFGTGYSSLSYLKRFPLSRL 708 Query: 273 NLHKTMFHDIESNSLTDIIATTIIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIA 332 + ++ DI ++ I +I L+ +++ V+A+GIET++Q ++ E+G + +G Sbjct: 709 KIDRSFVRDITTDDNDASITKAVIALAHSMNLKVVAEGIETQEQLLFLKEKGCEVGQGYL 768 Query: 333 LSSPL---PADAF 342 S P+ P D F Sbjct: 769 YSPPVAKEPFDHF 781 >UniRef50_Q7NZ89 Putative uncharacterized protein n=1 Tax=Chromobacterium violaceum RepID=Q7NZ89_CHRVO Length = 936 Score = 342 bits (877), Expect = 2e-92, Method: Composition-based stats. Identities = 58/339 (17%), Positives = 129/339 (38%), Gaps = 17/339 (5%) Query: 19 IEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIKT-VSCQKMKLYKKLNVKSDLTLW- 76 I P + + ++ SI V + Y+ L +D ++ Sbjct: 595 ISDPGEAALAAERVRDVFANPIELHNHVLTITPSIGISVYPDDGRDYETLVRNADAAMYH 654 Query: 77 -----RDVFLRFKAYLQPKNIICDNFNSSVLPVVSSKGESMAHYNIYYQPIYNAKNGNIA 131 R+ + + A L + + + ++YQP ++G I Sbjct: 655 AKSSGRNSYKFYTADLNARAREIL-----AIESQLRFALERDEFVLHYQPQVEMESGRIV 709 Query: 132 GCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHI----NKLFSPIKNNLPHGFFI 187 G + I + I + + + + + + Sbjct: 710 GAEALIRWNHPSLGLLGP-VRFIQVAEERGFIVQIGNWVIAEATRQLVEWRRAGLPELTL 768 Query: 188 TININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSLRRIRNNNV 247 IN++ D+ + ++ G L ++ + + + ++ ++N + Sbjct: 769 AINLSALQFRQPDLALQVKQALESSGLPGHALDIEVTESIIMEDAQATIQTIDNMKNMGL 828 Query: 248 YLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSKQLHIDVI 307 LS++DFG GY+ LS+L+ + + ++ DI ++ IA II+++K L++ V+ Sbjct: 829 RLSIDDFGTGYSSLSYLKRFKADKLKIDRSFVRDIPQDADDSAIARAIINMAKNLNMQVV 888 Query: 308 ADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKL 346 A+G+ET +Q ++ + G +++G ++ PLPAD F L Sbjct: 889 AEGVETMEQWQFLEQEGCDFVQGYLIAKPLPADDFAELL 927 >UniRef50_Q47H73 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q47H73_DECAR Length = 585 Score = 341 bits (875), Expect = 2e-92, Method: Composition-based stats. Identities = 58/327 (17%), Positives = 128/327 (39%), Gaps = 7/327 (2%) Query: 27 EIEIELLSQLLKGYSVNEISKRRNRSIK-TVSCQKMKLYKKLNVKSDLTLWRDVFLRFKA 85 E+ L+ + + V S+ ++ + + L +D ++R + A Sbjct: 253 EVARRLVEVFSRPFEVAGHELTVTPSLGISIYPHDGRDLETLLRNADTAMYRAKEMGRNA 312 Query: 86 -YLQPKNIICDNFNSSVLPVVSSKGESMAHYNIYYQPIYNAKNGNIAGCDVTIALKNSDG 144 + + ++ + + ++YQP+ N + G I G + I + + Sbjct: 313 FQFYSSEMNTTTLDRLLMESNLRRALVQNEFILHYQPLVNLETGLIIGVEALIRWLHPEL 372 Query: 145 SAFALDSDRINYNPNDNKVSYLFGHI-NKLFSPIKNNLPHGFF---ITININPEDILTCD 200 D I+ ++ + + + K G + +N+ P Sbjct: 373 GLIMPD-RFIHVAEETGLINPIGDWVLCEACRQAKAWCDAGLPPICMAVNVAPVQFRQAG 431 Query: 201 IERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSLRRIRNNNVYLSLNDFGMGYAE 260 + G + RL L+ + + ++ +L + V LSL+DFG GY+ Sbjct: 432 FVEMVAGALATSGLDASRLELELTERTVMHDADINMGTLSALHRMGVELSLDDFGTGYSS 491 Query: 261 LSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSKQLHIDVIADGIETKKQAGYM 320 L++L+ P + + ++ +D+E++ IA+TI+ + + L + V+A+G+E +Q + Sbjct: 492 LAYLKRFPVGKLKIDRSFVNDLETDPDDWAIASTIVSMGRSLRMTVLAEGVEKVEQLALL 551 Query: 321 IERGVKYLKGIALSSPLPADAFVRKLL 347 + G +G S P+ AD L Sbjct: 552 RKMGCDMAQGYYFSRPMSADGMADMLR 578 >UniRef50_C5T1I4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T1I4_ACIDE Length = 830 Score = 341 bits (875), Expect = 3e-92, Method: Composition-based stats. Identities = 57/326 (17%), Positives = 128/326 (39%), Gaps = 9/326 (2%) Query: 28 IEIELLSQLLKGYSVNEISKRRNRSIKTVSCQKMKLY-KKLNVKSDLTLWRDVFLRFKAY 86 + +LL+ L + +++ SI +L +L ++DL +++ Sbjct: 503 VAEKLLASLNQPFALGGQQHYSTPSIGITLFGDERLSVDELLKRADLAMYQAKGAGRNTQ 562 Query: 87 LQPKNIICDNFN-SSVLPVVSSKGESMAHYNIYYQPIYNAKNGNIAGCDVTIALKNSDGS 145 + N S L +G + +YYQP+ + + G + + ++ Sbjct: 563 RFFDPDMQAAVNARSNLEADLRQGLARGELCVYYQPVVD-HRARLLGVEALVRWRHPVRG 621 Query: 146 AFALDSDRINYNPNDNKVSYLFGHINKLFSPIKNNLPH-----GFFITININPEDILTCD 200 + +D I + L + + +++N++ Sbjct: 622 MISP-ADFIPLAEQTGLILPLGQQVLQTACGQLQRWGERKQTRHLSVSVNVSARQFRQPG 680 Query: 201 IERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSLRRIRNNNVYLSLNDFGMGYAE 260 E L ++ G + +L L+ + L + + + +++ V +L+DFG GY+ Sbjct: 681 FVAEVLQTLQGCGADPRKLKLELTESLLLGDVEDTIARMEQLKREGVGFALDDFGTGYSS 740 Query: 261 LSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSKQLHIDVIADGIETKKQAGYM 320 LS+L+ +P V + + D+ ++ I TI+ L++ L ++V+A+G+ET Q ++ Sbjct: 741 LSYLKRLPLDQVKIDQGFVRDVLTDPNDAAIVRTILALAQSLDLEVVAEGVETTGQLAFL 800 Query: 321 IERGVKYLKGIALSSPLPADAFVRKL 346 G + +G P P + L Sbjct: 801 RLHGCEGFQGYLFGRPGPVEDIDAYL 826 >UniRef50_A1W7N9 Diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(S) n=4 Tax=Comamonadaceae RepID=A1W7N9_ACISJ Length = 1047 Score = 341 bits (875), Expect = 3e-92, Method: Composition-based stats. Identities = 66/336 (19%), Positives = 136/336 (40%), Gaps = 20/336 (5%) Query: 26 SEIEIELLSQLLKGYSVNEISKRRNRSIKTVSCQKM-KLYKKLNVKSDLTLW------RD 78 E+ +L+ + + ++ S+ + + + +L +SDL ++ RD Sbjct: 717 EEMGQTILAAIRAPFDIDGQQHHTALSVGIAIFRGVRESADELLKRSDLAMYEAKAAGRD 776 Query: 79 VFLRFKAYLQPKNIICDNFNSSVLPVVSSKGESMAHYNIYYQPIYNAKNGNIAGCDVTIA 138 F +Q + L G ++YQP + G I G + + Sbjct: 777 TLRFFDPQMQAAVS-----ERAALEADLRAGLDAGQLELFYQPKVD--QGRITGAEALVR 829 Query: 139 LKNSDGSAFALDSDRINYNPNDNKVSYLFGHINK-LFSPIKNNLPHG----FFITININP 193 ++ D + ++ I + + + + + + H + +N++P Sbjct: 830 WRHPDRGFISP-AEFIPLAEESGLILRVGEWVMRSACAQLAQWSAHPVLGELTVAVNVSP 888 Query: 194 EDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSLRRIRNNNVYLSLND 253 + L + G + RL L+ + L + + + ++R V SL+D Sbjct: 889 RQFHEGSFVPQVLEALAASGADARRLRLELTEGMLLQDVEDTIAKMVQLRGYGVGFSLDD 948 Query: 254 FGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSKQLHIDVIADGIET 313 FG GY+ L++L+ +P + + K+ D+ ++ +IA TI+ L L + V+A+G+ET Sbjct: 949 FGTGYSSLAYLKRLPLHELKIDKSFVRDVLTDPNDAVIARTIVALGTSLGLRVVAEGVET 1008 Query: 314 KKQAGYMIERGVKYLKGIALSSPLPADAFVRKLLAS 349 + Q ++ G +G LS PL A AF +L Sbjct: 1009 EAQRAFLERNGCHAWQGYLLSPPLQAAAFEALVLKR 1044 >UniRef50_A6T1A8 Sensory box/GGDEF family protein n=1 Tax=Janthinobacterium sp. Marseille RepID=A6T1A8_JANMA Length = 910 Score = 341 bits (875), Expect = 3e-92, Method: Composition-based stats. Identities = 57/333 (17%), Positives = 127/333 (38%), Gaps = 17/333 (5%) Query: 26 SEIEIELLSQLLKGYSVNEISKRRNRSIKT-VSCQKMKLYKKLNVKSDLTLWRDV----- 79 S++ ++ ++K ++ + S+ V L +D+ ++R Sbjct: 575 SDVIQRIMEAVVKPLTIQGSEFFLSCSMGIAVYPNDGADPTTLLAHADVAMYRSKELGRN 634 Query: 80 -FLRFKAYLQPKNIICDNFNSSVLPVVSSKGESMAHYNIYYQPIYNAKNGNIAGCDVTIA 138 F + + + + + + ++YQP + G I G + + Sbjct: 635 NFQFYTPAMNDQAL-----ERLRIEGELRHAIELNELVLHYQPQVDLHTGAIVGLEALVR 689 Query: 139 LKNSDGSAFALDSDRINYNPNDNKVSYLFGHI----NKLFSPIKNNLPHGFFITININPE 194 + I+ + + + + ++ I +N++ Sbjct: 690 WNHPILGMVQP-GSFISLAEETGLIIPIGAWVLQTACRQAKAWQDMGFTQLRIAVNLSAR 748 Query: 195 DILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSLRRIRNNNVYLSLNDF 254 + ++ G E L ++ + + I R +LR +++ V LS++DF Sbjct: 749 QFTQASLLESIKDTLQETGLEARFLEIELTESSVMADIERNILTLRDLKSLGVQLSVDDF 808 Query: 255 GMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSKQLHIDVIADGIETK 314 G G++ L++L+ P + + ++ DI N I ++II L+ L ++VIA+G+ET Sbjct: 809 GTGHSSLAYLKRFPIDTLKIDRSFVRDIAINQDDASIVSSIISLAHNLKLNVIAEGVETA 868 Query: 315 KQAGYMIERGVKYLKGIALSSPLPADAFVRKLL 347 Q + +G ++G PLP+D LL Sbjct: 869 SQMDILRAQGCNEIQGYYFCKPLPSDQIETLLL 901 >UniRef50_Q2J3Q8 Diguanylate cyclase/phosphodiesterase with GAF sensor n=2 Tax=Rhodopseudomonas palustris RepID=Q2J3Q8_RHOP2 Length = 743 Score = 341 bits (875), Expect = 3e-92, Method: Composition-based stats. Identities = 67/309 (21%), Positives = 132/309 (42%), Gaps = 3/309 (0%) Query: 36 LLKGYSVNEISKRRNRSIKT-VSCQKMKLYKKLNVKSDLTLWRDVFLRFKAYLQPKNIIC 94 L+ ++ + S ++ Q +L +DL L+R Y+ + + Sbjct: 421 LIDPIEIDGHQLVISTSAGIALAPQHGTDSDELIKNADLALYRAKAAGRNGYVTFETAMK 480 Query: 95 DNFN-SSVLPVVSSKGESMAHYNIYYQPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDR 153 D N L + +++YYQP A++G + G + + ++ F S+ Sbjct: 481 DRANARQQLEGELRQAILNREFDLYYQPQVEARSGRVIGAEALLRWRHPRRG-FVPPSEF 539 Query: 154 INYNPNDNKVSYLFGHINKLFSPIKNNLPHGFFITININPEDILTCDIERECLHFIKVFG 213 I + L + K + P + IN++P + ++ +++ G Sbjct: 540 IPVAEETGLIEKLGEWVLKEAAAEAIRWPAPIKLAINLSPVQLSRGNLTDTVTQALRLSG 599 Query: 214 TERIRLVLQFSTKEELYIIRRYQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVN 273 RL ++ + L + +R++R+ V ++L+DFG GY+ LS+L PF + Sbjct: 600 LPPERLEVEITENVFLEDEVNNLAVIRQLRSLGVSVALDDFGTGYSSLSYLTRFPFDQIK 659 Query: 274 LHKTMFHDIESNSLTDIIATTIIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIAL 333 + K ++ S I +++I L++ L I +A+G+ET +Q + E GV Y +G Sbjct: 660 IDKFFSMNLIERSDCATIVSSVITLARGLGISTVAEGVETVRQFELLREAGVDYFQGYLF 719 Query: 334 SSPLPADAF 342 P+PA A Sbjct: 720 GHPVPASAL 728 >UniRef50_Q1JZB1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JZB1_DESAC Length = 1092 Score = 341 bits (875), Expect = 3e-92, Method: Composition-based stats. Identities = 61/339 (17%), Positives = 142/339 (41%), Gaps = 11/339 (3%) Query: 22 PCLLSEIEIELLSQLLKGYSVNEISKRRNRSIK-TVSCQKMKLYKKLNVKSDLTLWRD-- 78 P + ++ ++ L + + +++ S + SI TV+ + +L +D+ +++ Sbjct: 746 PVVGADTAQRVIDALSQPFQIDDYSLHVSASIGITVAPVDAREPDELIKCADIAMFKAKD 805 Query: 79 -VFLRFKAYLQPKNIICDNFNSSVLPVVSSKGESMAHYNIYYQPIYNAKNGNIAGCDVTI 137 +K Y + N+ +L S +YYQP + ++ I G + + Sbjct: 806 AGRNTYKFYERSMNLKTHEL--LLLENDLRHALSRDQLELYYQPQLDLQSNCIVGFEALL 863 Query: 138 ALKNSDGSAFALDSDRINYNPNDNKVSYLFGHI----NKLFSPIKNNLPHGFFITININP 193 + + + + I + + I + + +NI+ Sbjct: 864 RWNHPERGLVSP-LEFIPLAEETGLIVSMGEWILRSACRQIRTWNEEHGRQLRVAVNISA 922 Query: 194 EDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSLRRIRNNNVYLSLND 253 D+ ++ G L L+ + +Y I+ ++ R++ V L+++D Sbjct: 923 RQFHHYDLVHCVEKVLEQTGVPTEWLELEITESLLMYDIQSSIETMMRLKKLGVRLAIDD 982 Query: 254 FGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSKQLHIDVIADGIET 313 FG GY+ LS+L+ P + + K+ D+ +++ IA + + L+ ++ + V+A+GIE Sbjct: 983 FGTGYSSLSYLKKFPICSLKIDKSFVDDLLTDASDAAIAESTLALASKMDLMVVAEGIEQ 1042 Query: 314 KKQAGYMIERGVKYLKGIALSSPLPADAFVRKLLASLKQ 352 ++Q Y+ +RG ++ +G +S PLP + + Sbjct: 1043 QEQLDYLQQRGCQFGQGYLISRPLPVAQCTQFCRERFTE 1081 >UniRef50_Q47HF3 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Proteobacteria RepID=Q47HF3_DECAR Length = 994 Score = 340 bits (874), Expect = 3e-92, Method: Composition-based stats. Identities = 63/332 (18%), Positives = 136/332 (40%), Gaps = 17/332 (5%) Query: 28 IEIELLSQLLKGYSVNEISKRRNRSIK-TVSCQKMKLYKKLNVKSDLTLWRDV------F 80 + +L + +SV S SI +V + + + + +D L R F Sbjct: 520 LAQRMLDAISVPFSVAGQSVAITASIGISVFPKNGENGEAMLRSADAALLRAKQSGRNTF 579 Query: 81 LRFKAYLQPKNIICDNFNSSVLPVVSSKGESMAHYNIYYQPIYNAKNGNIAGCDVTIALK 140 + + D + + + ++YQP + +G++ G + + Sbjct: 580 SFYSPEMD-----ADAARRLSIESALRDALARDEFCVHYQPQVSLDSGHMIGMEALLRWN 634 Query: 141 NSDGSAFALDSDRINYNPNDNKVSYLFGHINKLFS-PIKNNLPHGF---FITININPEDI 196 ++ + + I + + + + K L G + +N++P Sbjct: 635 SALLGPISP-VEFIPIAEETGLIMQIGDWVLRTACHQTKAWLDLGLLPLHVAVNLSPRQF 693 Query: 197 LTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSLRRIRNNNVYLSLNDFGM 256 D+ + H + G L L+ + + I + ++++ + LSL+DFG Sbjct: 694 RQADLPAQVAHALAESGLPAGALELEITESAFIDDIDDAVAMCSKLKSLGIKLSLDDFGT 753 Query: 257 GYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSKQLHIDVIADGIETKKQ 316 GY+ L+++ PF + + ++ DI +N + IA+ I + + L++ V+A+G+ET+ Q Sbjct: 754 GYSSLAYVSRFPFDKIKIDQSFVRDIVNNPVNAAIASAAIVMGRSLNLSVLAEGVETEAQ 813 Query: 317 AGYMIERGVKYLKGIALSSPLPADAFVRKLLA 348 A ++ R ++G S PLP + F LL+ Sbjct: 814 AAFLRSRRCDAIQGYLFSRPLPPEEFAPLLLS 845 >UniRef50_Q1NQ51 PAS:GGDEF:EAL n=1 Tax=delta proteobacterium MLMS-1 RepID=Q1NQ51_9DELT Length = 751 Score = 340 bits (874), Expect = 4e-92, Method: Composition-based stats. Identities = 62/337 (18%), Positives = 128/337 (37%), Gaps = 19/337 (5%) Query: 22 PCLLSEIEIELLSQLLKGYSV-NEISKRRNRSIK-TVSCQKMKLYKKLNVKSDLTLW--- 76 P +E ELL+ L + + + SI TV L ++ ++ Sbjct: 420 PQEATETARELLASLDQPFQLDGGQEIYLGASIGITVFPGDGTTPPDLLKNAEAAMYHAK 479 Query: 77 ---RDVFLRFKAYLQPKNIICDNFNSSVLPVVSSKGESMAHYNIYYQPIYNAK-NGNIAG 132 R+ F + + D + + + +YYQP + + ++ G Sbjct: 480 ENGRNRFSFYAEQMN-----ADALARLQMEMALRQAVENRELLLYYQPQWQLADSPSVIG 534 Query: 133 CDVTIALKNSDGSAFALDSDRINYNPNDNKVS----YLFGHINKLFSPIKNNLPHGFFIT 188 + I +N +G A D I + ++ + ++ + Sbjct: 535 AEALIRWRNKEGELIAPD-QFIPLAEKSGLIGAIGDWVIDEACRQLRIWRDQGKKQLRVA 593 Query: 189 ININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSLRRIRNNNVY 248 +N++ ++ ++ L+ + + L R V Sbjct: 594 VNVSARQFRAGNLAEVVAQALRKHEIPAHCFELELTESILMEKPEEAAELLNRCAALGVG 653 Query: 249 LSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSKQLHIDVIA 308 ++L+DFG GY+ L++L P + + + ++ D+ S +IA +II L+ ++ + V+A Sbjct: 654 IALDDFGTGYSSLAYLSRFPITVLKIDRSFVRDLNHRSEAALIADSIIALAHRMGLQVVA 713 Query: 309 DGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRK 345 +G+ET++Q Y+ RG +G S PLPA+ F Sbjct: 714 EGVETEEQRAYLQSRGCDLAQGFLFSPPLPAEQFAEF 750 >UniRef50_D1U882 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfovibrio aespoeensis Aspo-2 RepID=D1U882_9DELT Length = 958 Score = 340 bits (874), Expect = 4e-92, Method: Composition-based stats. Identities = 61/333 (18%), Positives = 131/333 (39%), Gaps = 13/333 (3%) Query: 25 LSEIEIELLSQLLKGYSVNEISKRRNRSIK-TVSCQKMKLYKKLNVKSDLTLWRDVFLRF 83 + ++ L + + + SI T+ + L +D+ +++ Sbjct: 621 VVDLAEGLQRVFEEPFVIKGQEVFITPSIGVTLYPDDGQDPASLVKNADMAMYQSKAKGR 680 Query: 84 KAY----LQPKNIICDNFNSSVLPVVSSKGESMAHYNIYYQPIYNAKNGNIAGCDVTIAL 139 +Y Q I L + + +Y+QP + +G ++G + + Sbjct: 681 NSYFLFTQQMSERIAQRLT---LESDMRRALKEREFTVYFQPKVDLASGEVSGLEALVRW 737 Query: 140 KNSDGSAFALDSDRINYNPNDNKVSYLFGHI----NKLFSPIKNNLPHGFFITININPED 195 DG D I + L + K ++ + +N++P Sbjct: 738 VKPDG-IIVSPEDFIPMAEETGLIVPLGEFVLDASCKAMQVLQGVGCSALTVAVNLSPIQ 796 Query: 196 ILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSLRRIRNNNVYLSLNDFG 255 D+ + ++ G RL L+ + + ++ + L R+ + +S++DFG Sbjct: 797 FGQEDLVEMVVANLERNGLPASRLELEITESTLMTDVQSSVAQLNRLVELGITISIDDFG 856 Query: 256 MGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSKQLHIDVIADGIETKK 315 GY+ L +L+N P S + + ++ DI + I T++ +++ + I V+A+G+ETK+ Sbjct: 857 TGYSSLYYLKNFPISTLKIDRSFIRDITIDDSDAKIVETVVLMARTMGIGVVAEGVETKE 916 Query: 316 QAGYMIERGVKYLKGIALSSPLPADAFVRKLLA 348 Q + G ++G S PLP + + LL Sbjct: 917 QLDLLATFGCATVQGYYYSRPLPLEKIIEFLLG 949 >UniRef50_B1ZGT4 Diguanylate cyclase/phosphodiesterase n=6 Tax=Methylobacterium RepID=B1ZGT4_METPB Length = 574 Score = 340 bits (874), Expect = 4e-92, Method: Composition-based stats. Identities = 63/347 (18%), Positives = 125/347 (36%), Gaps = 13/347 (3%) Query: 10 LIDYDSIVNIEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIK-TVSCQKMKLYKKLN 68 +I E P + L+ + + Y V+ S+ +S + L Sbjct: 225 IIQGGPSSGAEQPQAAEALARRLVDLVGRTYVVDGHMLNVGVSVGVALSPADGRNADDLL 284 Query: 69 VKSDLTLWRDVFL------RFKAYLQPKNIICDNFNSSVLPVVSSKGESMAHYNIYYQPI 122 +DL L+R F+ + + + L + + ++ +++ +QP Sbjct: 285 KHADLALYRAKAEGRGTHRFFEPAMNAQMQARRS-----LEIDLRRALALKQFDLAFQPQ 339 Query: 123 YNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINKLFSPIKNNLP 182 + G I G + + + + + + I + + + Sbjct: 340 IQLETGQIVGFEALLRWNHPERGPVSP-ALFIPLAEEIGLIVGIGEWALRTACREAAGWT 398 Query: 183 HGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSLRRI 242 I +N++P + +H + G + RL L+ + L L + Sbjct: 399 QPASIAVNLSPVQFRGGRLVETVMHVLAQTGLDPARLELEITEGALLENTDSVLDVLNGL 458 Query: 243 RNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSKQL 302 R V +S++DFG GY+ LS+LQ PF + + ++ +E N+ I I L L Sbjct: 459 RALGVKISMDDFGTGYSSLSYLQKFPFDKIKIDQSFVRGMEGNAECGAIVRAIARLGASL 518 Query: 303 HIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLLAS 349 + A+G+ET Q + G ++G P+PA L+ S Sbjct: 519 GMRTTAEGVETATQLDAIRAEGCTEVQGYLTGRPMPAAQAAALLIPS 565 >UniRef50_C6WVK9 Diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(S) n=1 Tax=Methylotenera mobilis JLW8 RepID=C6WVK9_METML Length = 1329 Score = 340 bits (873), Expect = 4e-92, Method: Composition-based stats. Identities = 58/325 (17%), Positives = 129/325 (39%), Gaps = 7/325 (2%) Query: 28 IEIELLSQLLKGYSVNEISKRRNRSIK-TVSCQKMKLYKKLNVKSDLTLWRDVFLRFK-A 85 + +LL + + ++ + SI + Q + +++L +D L+R + Sbjct: 1003 VAKKLLDIVAQPFNFHGQKIVLTASIGISAYPQDGESFEQLAQSADAALYRAKYEGRNNF 1062 Query: 86 YLQPKNIICDNFNSSVLPVVSSKGESMAHYNIYYQPIYNAKNGNIAGCDVTIALKNSDGS 145 + + + +L + +YYQP Y++K I G + I ++ + Sbjct: 1063 QFFARQMHEQAHDILLLESELRSAIEHEEFLLYYQPQYDSKTSKIIGLEALIRWQHPEKG 1122 Query: 146 AFALDSDRINYNPNDNKVSYLFGHIN----KLFSPIKNNLPHGFFITININPEDILTCDI 201 + + I ++ + + K + + + +N++ + Sbjct: 1123 LVSP-AVFIPIAEESGLIAEIGDWVLRTAVKQLASWQEAGLGAVPVAVNLSVVQFHQDTL 1181 Query: 202 ERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSLRRIRNNNVYLSLNDFGMGYAEL 261 ++ + L L+ + + R + L ++ + V LS++DFG GY+ L Sbjct: 1182 YGSVCQILRDTKVDPSMLELELTEGIAMEDSERTLNVLNQLNSLGVRLSIDDFGTGYSSL 1241 Query: 262 SHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSKQLHIDVIADGIETKKQAGYMI 321 S+L+ + + ++ I S+ I T II ++K L IA+G+ET +Q ++I Sbjct: 1242 SYLKKFKIDKLKIDQSFVRGIGSHPQDAAIITAIISMAKSLSFKTIAEGVETLEQLNFLI 1301 Query: 322 ERGVKYLKGIALSSPLPADAFVRKL 346 ++G S PLP+ + L Sbjct: 1302 ANSCDEIQGYYFSKPLPSTEVTKLL 1326 >UniRef50_Q39R25 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Bacteria RepID=Q39R25_GEOMG Length = 905 Score = 340 bits (873), Expect = 4e-92, Method: Composition-based stats. Identities = 50/335 (14%), Positives = 126/335 (37%), Gaps = 12/335 (3%) Query: 20 EFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIKT-VSCQKMKLYKKLNVKSDLTLW-- 76 E P +++ + ++++ + SI + + L +D ++ Sbjct: 553 EVPDVIT-VAKKMINVFAAPLLLMGNEIYVTASIGIALFPTDGETVDALLKNADAAMYHA 611 Query: 77 -RDVFLRFKAYLQPKNIICDNFNSSVLPVVSSKGESMAHYNIYYQPIYNAKNGNIAGCDV 135 ++ Y NI F L + + ++YQP + +NG I G + Sbjct: 612 KEQGKNNYQFYSAEMNIRV--FERLSLETSLHRAVKNQEFLLHYQPRVDLRNGRICGVEA 669 Query: 136 TIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINKLFSP----IKNNLPHGFFITINI 191 + + + + + I + + + + ++ + +N+ Sbjct: 670 LVRWNHPEMGLVSP-AKFIPLAEETGLIVPMGEWVLRTACAQNKAWQDAGLPPLRMAVNL 728 Query: 192 NPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSLRRIRNNNVYLSL 251 + ++ + G L L+ + + + + LR + + + +++ Sbjct: 729 SARQFRQENLIAMVEEILMETGLAPQWLELELTESLVMQEAEKSAAILRELTDRGIEVAI 788 Query: 252 NDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSKQLHIDVIADGI 311 +DFG GY+ LS+L+ P + + + + D+ + + TII ++ L + IA+G+ Sbjct: 789 DDFGTGYSSLSYLKRFPIANLKIDQAFIRDMTRDPDDATLVKTIITMAHGLGMKTIAEGV 848 Query: 312 ETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKL 346 E +Q ++ + ++G S P+ A+ R L Sbjct: 849 ELAEQIDFLCRHQCEEMQGYYFSRPITAEELGRLL 883 >UniRef50_C6ME82 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Nitrosomonas sp. AL212 RepID=C6ME82_9PROT Length = 1136 Score = 340 bits (873), Expect = 5e-92, Method: Composition-based stats. Identities = 61/348 (17%), Positives = 145/348 (41%), Gaps = 7/348 (2%) Query: 9 NLIDYDSIVNIEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIKTVSCQKMKLYKKLN 68 L+ + I + P ++++ I+LL+ S +EI + I ++ +L Sbjct: 775 FLVVLEDIKDSNEPAMVAQTLIDLLATPFSLPSGHEIFINTSIGI-SLFPTDANSVTELI 833 Query: 69 VKSDLTLWRDVFLRFKAYLQPKNIICDNFNS-SVLPVVSSKGESMAHYNIYYQPIYNAKN 127 +D+ ++ Y + + N VL + S + ++YQP+ +A+ Sbjct: 834 QHADMAMYLAKQEGRNTYRYHTDALSIAANERLVLETQLRQALSAGEFVLHYQPLIDARK 893 Query: 128 GNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINK-LFSPIKNNLPHGF- 185 G + G + + + D + + I + L + + + + + F Sbjct: 894 GQVMGVEALVRWQPPDKAMVSP-GKFIPIAEETGLIVPLGEWVLRTACAQGRAWMDADFP 952 Query: 186 --FITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSLRRIR 243 + +N++ + ++ ++ L L+ + + + L+ ++ Sbjct: 953 PLVMAVNLSVRQFQSENLVELIRQVLEETKLPAACLELELTESMFMEHAEQSIEILKTLK 1012 Query: 244 NNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSKQLH 303 + V LS++DFG GY+ L++L+ P + + ++ H + + IA TII +++ L Sbjct: 1013 SLGVRLSIDDFGTGYSSLTYLKRFPIDKLKIDQSFVHGLAYDPNDREIAATIIAMARNLK 1072 Query: 304 IDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLLASLK 351 +DV+A+G+E+++Q + + G Y +G P+PA + + Sbjct: 1073 LDVLAEGVESEQQLDILNQHGCDYYQGYLFHRPVPAQELEVWFRENKR 1120 >UniRef50_Q3A2X0 Motility repressor MorA n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A2X0_PELCD Length = 643 Score = 340 bits (873), Expect = 5e-92, Method: Composition-based stats. Identities = 57/350 (16%), Positives = 128/350 (36%), Gaps = 16/350 (4%) Query: 5 KIKLNLIDYDSIVNIEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIKT-VSCQKMKL 63 + + L + DS C + E L S + + + SI + Q + Sbjct: 275 EFVVVLNEIDSAT-----CAAKKTEKILASLRDNPFDLVVAKVFASASIGIALFPQNGRD 329 Query: 64 YKKLNVKSDLTLWRD---VFLRFKAYLQPKNIICDNFNSSVLPVVSSKGESMAHYNIYYQ 120 + L +D+ ++ ++ + + + L V + + + YQ Sbjct: 330 AETLLKHADMAMYEAKNVGRNTYRFFSDELHRRTIERHK--LEVGLRRAVRKKEFFLVYQ 387 Query: 121 PIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINKLFSPIKNN 180 P + G I + + ++ + L S I + + I + Sbjct: 388 PQVDLGTGRIVALEALVRWQHPEAGVL-LPSTFIPVAEETGLIHIMGEWILRTACHQAMQ 446 Query: 181 LP----HGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQ 236 I +N + D+ + G L L+ + + + Sbjct: 447 WQRMGLPPMRIAVNFSARQFRQPDLVERIEQILLESGLPPHHLELEITESVFMENLESAI 506 Query: 237 SSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTII 296 +L ++ + ++++DFG GY+ L++L+N P + + + DI + I TI+ Sbjct: 507 ETLVDLKTRAIQIAIDDFGTGYSSLNYLKNFPLDRLKIAQDFVRDIPDDEDDATIIETIM 566 Query: 297 DLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKL 346 ++ +L I V+A+G+ET +Q ++ +G ++G + P+ A+ L Sbjct: 567 AMANRLGIKVLAEGVETMEQVTFLRRKGCHEMQGFYFARPMQAEEIAGFL 616 >UniRef50_C0Z6C0 Probable signaling protein n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0Z6C0_BREBN Length = 708 Score = 340 bits (872), Expect = 5e-92, Method: Composition-based stats. Identities = 63/336 (18%), Positives = 139/336 (41%), Gaps = 17/336 (5%) Query: 26 SEIEIELLSQLLKGYSVNEISKRRNRSIKT-VSCQKMKLYKKLNVKSDLTLW------RD 78 +E+ +++ QL + + ++ + SI + Q + L ++D L+ ++ Sbjct: 380 TELAEQIMYQLQRPFELDGHVFNVSCSIGIALYPQDGDNPEDLLKRADTALYTVKSRGKN 439 Query: 79 VFLRFKAYLQPKNIICDNFNSSVLPVVSSKGESMAHYNIYYQPIYNAKNGNIAGCDVTIA 138 + F ++ K++ ++ K + IYYQP + + G + + Sbjct: 440 GYDFFDPSMEAKSL-----ERILMENEMRKAIEQEQFQIYYQPKIDIATSAMTGMEALVR 494 Query: 139 LKNSDGSAFALDSDRINYNPNDNKVSYLFGHINKLFSPIKNNLPHG---FFITININPED 195 + + + I + L I K N +++N++ Sbjct: 495 WVHPELG-IIPPNRFIPIAEETGMILALGEWILKQACKQNKNWHDQGYTLKVSVNLSARQ 553 Query: 196 ILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSLRRIRNNNVYLSLNDFG 255 I D+ ++ L L+ + + + + L++IR+ + +S++DFG Sbjct: 554 IYQKDLVEMIKDILQETKLSPHWLELEITESIFVK-MEEATAVLQQIRDIGIQISIDDFG 612 Query: 256 MGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSKQLHIDVIADGIETKK 315 GY+ S+++++P + + + DI N + I I+ +++ L+++VIA+GIE Sbjct: 613 TGYSSFSYIKSLPVDTIKIDASFIRDIHHNQESQAIVKAIVTIAQSLNMNVIAEGIELHD 672 Query: 316 QAGYMIERGVKYLKGIALSSPLPADAFVRKLLASLK 351 Q + E G + +G S PLP D F + L L+ Sbjct: 673 QVAALKENGCDHGQGYLFSKPLPTDDFDQLLRQELQ 708 >UniRef50_Q0EWZ7 Putative uncharacterized protein n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0EWZ7_9PROT Length = 1217 Score = 340 bits (872), Expect = 5e-92, Method: Composition-based stats. Identities = 63/347 (18%), Positives = 133/347 (38%), Gaps = 18/347 (5%) Query: 5 KIKLNLIDYDSIVNIEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIK-TVSCQKMKL 63 + + L D + IE I ++L + ++V++ SI ++ + Sbjct: 864 EFIILLGDVGDLAAIEI------IVQKILDAFSEPFTVDDHIVSVTSSIGISIFPNDGRD 917 Query: 64 YKKLNVKSDLTLWRD---VFLRFKAYLQPKNIICDNFNSSVLPVVSSKGESMAHYNIYYQ 120 + +L +S+ L + + + + NI + L + IYYQ Sbjct: 918 FNRLISQSEAALQKAKAAGKDTYNFFTEQMNI--NALEHMQLQGQLRHAIINQEFRIYYQ 975 Query: 121 PIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHI----NKLFSP 176 P + N + G + + ++ I + L + + Sbjct: 976 PQIDTLNERMIGAEALVRWQHPQHG-LVPPLKFIPLAERSGLIIPLGEWVLNEACRQAQV 1034 Query: 177 I-KNNLPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRY 235 K N + +N++ +I + ++ G L L+ + L + Sbjct: 1035 WRKRNRMPSMVMAVNLSAVQFKRGNIVETVIQALERSGLPAENLELELTESILLDDVEVV 1094 Query: 236 QSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTI 295 +L R+++ + LS++DFG GY+ LS+L+ + + + ++ D+ + I + I Sbjct: 1095 METLHRLKDIGIKLSIDDFGTGYSSLSYLKRLAVDKLKIDQSFVRDMVVDPEDAAIVSAI 1154 Query: 296 IDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAF 342 I L L + VIA+G+ET+ Q + ++G S P+PA+ F Sbjct: 1155 IQLGHTLQLTVIAEGVETRAQLQLLKSLECNEVQGYLFSRPIPAEDF 1201 >UniRef50_C6P464 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P464_9PROT Length = 1347 Score = 340 bits (872), Expect = 6e-92, Method: Composition-based stats. Identities = 69/345 (20%), Positives = 135/345 (39%), Gaps = 14/345 (4%) Query: 18 NIEFPCLLSEIEIELLSQLLKGYSVN-EISKRRNRSIKT-VSCQKMKLYKKLNVKSDLTL 75 +I P + + LL L + + ++ E SI + ++L +D + Sbjct: 1005 HINEPEDSAIVARSLLETLAQPFVLHGEREIFIGASIGISIFPNDGDSAEQLIQHADAAM 1064 Query: 76 WRDVFL---RFKAYLQPKNIICDNFNSSVLPVVSSKGESMAHYNIYYQPIYNAKNGNIAG 132 + L + Y + + + L + +YYQP + G+I G Sbjct: 1065 HQAKTLGRNTYHFYTEDLSRASNE--HLELENRLRHAITANQLRVYYQPQVDIATGHIIG 1122 Query: 133 CDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINKL-----FSPIKNNLPHGFFI 187 + + ++ + I + + + K I LP + Sbjct: 1123 AEALVRWQDPERGLVQP-GQFIPLAEETGLIGAIGEWVLKETCLQGMRWIDAGLPF-LTL 1180 Query: 188 TININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSLRRIRNNNV 247 +N++P L +I + G RL L+ + + L +R ++ Sbjct: 1181 AVNLSPHQFLRGNIAGLISKVLAETGFPADRLELELTESALMQQGEDVIKMLHLLRAQDI 1240 Query: 248 YLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSKQLHIDVI 307 L+++DFG GY+ LS+L+ P + + K+ DI + IA TII + L V+ Sbjct: 1241 RLAIDDFGTGYSSLSYLKRFPLDILKIDKSFVDDIPFHQDDMEIAATIIAMGHILGFKVL 1300 Query: 308 ADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLLASLKQ 352 A+G+ET++Q ++ RG +G S P+PA+ F + L ++ + Sbjct: 1301 AEGVETREQLEFLQARGCDLYQGYLTSPPIPAEEFEKLLKENMAR 1345 >UniRef50_Q2W3S8 Predicted signal transduction protein containing a membrane domain n=4 Tax=Bacteria RepID=Q2W3S8_MAGSA Length = 548 Score = 340 bits (872), Expect = 6e-92, Method: Composition-based stats. Identities = 56/325 (17%), Positives = 130/325 (40%), Gaps = 7/325 (2%) Query: 28 IEIELLSQLLKGYSVNEISKRRNRSIK-TVSCQKMKLYKKLNVKSDLTLWRDVFLRFKAY 86 + + L+ + + ++++ SI +V +L ++ L Y Sbjct: 217 VAEKALNAVKEPFALDGQEVVVTFSIGISVYPLDADSSAQLVKHAENALHYAKVSGRNQY 276 Query: 87 LQ-PKNIICDNFNSSVLPVVSSKGESMAHYNIYYQPIYNAKNGNIAGCDVTIALKNSDGS 145 K++ + L + + + ++YQP +A I G + I + + Sbjct: 277 QFFSKDMNRKAKSRLELEGRMRRALANQEFVVFYQPKVSADRDAIVGAEALIRWMDPERG 336 Query: 146 AFALDSDRINYNPNDNKVSYLFGHINKLFSPIKNNLPH----GFFITININPEDILTCDI 201 + I ++ + + + +++N++ + + Sbjct: 337 MV-PPGEFIPVAEESGQIEPIGTWVLRQSCIQNRLWQEAGFNPIKVSVNVSARQFRSPSL 395 Query: 202 ERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSLRRIRNNNVYLSLNDFGMGYAEL 261 + + G + L L+ + + + ++ +R+ + LS++DFG GY+ L Sbjct: 396 LQTVTEVLDSTGLDPKWLELEITESMLMNDVDTAVRKMKALRDLGIGLSIDDFGTGYSSL 455 Query: 262 SHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSKQLHIDVIADGIETKKQAGYMI 321 S+L P + + + + D+++N T IA II LS+ L+++V+A+G E + ++ Sbjct: 456 SYLGRFPITTLKIDRAFIADVDTNPKTAEIARAIIGLSRGLNLEVVAEGAEIAEHIMFLR 515 Query: 322 ERGVKYLKGIALSSPLPADAFVRKL 346 G ++G S P+PAD F R + Sbjct: 516 NNGCDTVQGFYYSRPVPADEFERMM 540 >UniRef50_Q0G5H0 GGDEF family protein n=1 Tax=Fulvimarina pelagi HTCC2506 RepID=Q0G5H0_9RHIZ Length = 684 Score = 340 bits (872), Expect = 6e-92, Method: Composition-based stats. Identities = 55/309 (17%), Positives = 121/309 (39%), Gaps = 3/309 (0%) Query: 36 LLKGYSVNEISKRRNRSIK-TVSCQKMKLYKKLNVKSDLTLWRDVFLRFKAYLQPKNIIC 94 L + + +N S+ ++ L +D+ L+ Y + + Sbjct: 363 LSRPFIINGHVIELGASLGVAIAPAHGTTADDLTQSADIALYAAKDAGRSTYKLFETAMA 422 Query: 95 DNFN-SSVLPVVSSKGESMAHYNIYYQPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDR 153 D L + + + + +YYQP +AK+G+ +G + I ++ + Sbjct: 423 DEVQLRRSLEIDLRRALNREEFEVYYQPQVDAKSGDYSGAEALIRWRHPQRGMLSP-VVF 481 Query: 154 INYNPNDNKVSYLFGHINKLFSPIKNNLPHGFFITININPEDILTCDIERECLHFIKVFG 213 I + + + + P + +N++P ++ + + + G Sbjct: 482 IPLAEELGLIGPIGNWVLRQACRDAVTWPSHLSVAVNLSPAQMMDRRLPKSVKSILNETG 541 Query: 214 TERIRLVLQFSTKEELYIIRRYQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVN 273 + RL L+ + + + + L +R + +SL+DFG GY+ LS+L P + + Sbjct: 542 LDPARLELEITETSLIGNDVQALAVLNELRAMGIAISLDDFGTGYSSLSYLHRFPINRIK 601 Query: 274 LHKTMFHDIESNSLTDIIATTIIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIAL 333 + ++ I ++ + I I L L + + A+GIE ++Q + G +L+G Sbjct: 602 IDRSFIDRIPTDVDSAAIVQAIAKLGGSLGMKITAEGIENEEQWSFSKTEGCDHLQGYLF 661 Query: 334 SSPLPADAF 342 S P+P Sbjct: 662 SKPIPGSEI 670 >UniRef50_C7RMB6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RMB6_9PROT Length = 922 Score = 339 bits (871), Expect = 8e-92, Method: Composition-based stats. Identities = 62/339 (18%), Positives = 136/339 (40%), Gaps = 19/339 (5%) Query: 25 LSEIEIELLSQLLKGYSV---NEISKRRNRSIKTVSCQKMKLYKKLNVKSDLTLWRDVFL 81 + + ++L+ L Y + E+ +R + + + L+ + D L + Sbjct: 577 VEAVAGKILAALDCPYRLVFDAELGRRNALNYHCTASIGITLFGAHSTNVDELLKQADLA 636 Query: 82 RFKAYLQPKNIICDNFNSS---------VLPVVSSKGESMAHYNIYYQPIYNAKNGNIAG 132 ++A +N I F+ L + + +YYQP ++ + G Sbjct: 637 MYQAKDSGRNAI-RFFDPEMQAAITSRVALEADLREAVEAGQFQLYYQPQVVGESHRLTG 695 Query: 133 CDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINKLFSPIKNNLPHG-----FFI 187 + + +S S+ I + L + + + Sbjct: 696 AEALLRWHHSRRGMV-PPSEFIPLAEETGLILPLGQWVLETACAQLATWASQPEMAQLTV 754 Query: 188 TININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSLRRIRNNNV 247 +N++ I D + L + G RL L+ + + + + + +++ V Sbjct: 755 AVNVSAHQIRQTDFVDQVLAVLADAGANPQRLKLELTESLLVSNVEDIIAKMTLLKSRGV 814 Query: 248 YLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSKQLHIDVI 307 SL+DFG GY+ LS+L+ +P + + ++ +++ +++ IA I+ L++ L + VI Sbjct: 815 GFSLDDFGTGYSSLSYLKRLPLDQLKIDQSFVNEVLTDANDAAIAKMIVALAESLGLAVI 874 Query: 308 ADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKL 346 A+G+ET++Q ++ E G +G S PLP F + + Sbjct: 875 AEGVETEEQRNFLAESGCHAYQGYLFSKPLPLAGFEQWI 913 >UniRef50_C7RNY7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RNY7_9PROT Length = 1003 Score = 339 bits (871), Expect = 8e-92, Method: Composition-based stats. Identities = 66/351 (18%), Positives = 135/351 (38%), Gaps = 13/351 (3%) Query: 5 KIKLNLIDYDSIVNIEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIKT-VSCQKMKL 63 + + L D D+ +E CL+++ ELL + + E SI + Sbjct: 621 EFTVVLPDVDT---VETACLIAQRIQELLG---RPTLIGEQEIAVTSSIGIALFPDDGAD 674 Query: 64 YKKLNVKSDLTLWRDVFLRFKA-YLQPKNIICDNFNSSVLPVVSSKGESMAHYNIYYQPI 122 L +D ++ L + + L KG + ++YQP Sbjct: 675 AATLLKHADTAMYYAKEQGRNNWQLYDRTLTTRTTARLALEGDIRKGLERGEFRLFYQPQ 734 Query: 123 YNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHI----NKLFSPIK 178 +A +G I G + I ++ + + I + + + + + Sbjct: 735 VSADDGTIVGVEALIRWQHPQQGLVSP-ARFIPVAEESGLIVPIGEWVLTAACRQVRQWQ 793 Query: 179 NNLPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSS 238 + + +N++ + I G RL L+ + + + Sbjct: 794 QSGVPVPRVAVNVSARQLGAAGFLDTVAAIIVATGIAADRLELELTESILMDPEAKRIKG 853 Query: 239 LRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDL 298 L R+R V+ S++DFG GY+ LS+++ P + + ++ H + ++ I T II + Sbjct: 854 LSRLRAMGVHFSIDDFGTGYSSLSYIKRFPIGTLKIDQSFVHGLPQDADDAGITTAIISM 913 Query: 299 SKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLLAS 349 ++ L+++V+A+G+ET++Q ++ L+G S PLP D L Sbjct: 914 ARSLNLEVVAEGVETREQLAFLQRALCPKLQGYLFSYPLPPDEMEAILRRG 964 >UniRef50_C6P1A0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P1A0_9PROT Length = 1011 Score = 339 bits (871), Expect = 8e-92, Method: Composition-based stats. Identities = 57/322 (17%), Positives = 133/322 (41%), Gaps = 9/322 (2%) Query: 32 LLSQLLKGYSVNEISKRRNRSIKTVSCQKMKLY-KKLNVKSDLTLWRDVFLRFKAYLQPK 90 +L+ L Y + + + SI +L ++D+ +++ Sbjct: 689 ILASLNVPYQLGIHTYDNSPSIGATLFNDNHNSIDELLKQADIAMYQAKKAGRNTMRFFD 748 Query: 91 NIICDNFN-SSVLPVVSSKGESMAHYNIYYQPIYNAKNGNIAGCDVTIALKNSDGSAFAL 149 + + + L + K + +YYQ + + G + + + + A Sbjct: 749 PRMQQSLSARLALELELRKAIEKDQFQLYYQIQVD-ETHRPLGAEALLRWMHPEHGLMAP 807 Query: 150 DSDRINYNPNDNKVSYLFGHIN-----KLFSPIKNNLPHGFFITININPEDILTCDIERE 204 ++ I + + + +L + K+ L ++IN++ + D + Sbjct: 808 -AEFIPMAEETGLIVPIGWWVLETACTQLKAWEKDPLTRNLVLSINVSAKQFHQPDFVDQ 866 Query: 205 CLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSLRRIRNNNVYLSLNDFGMGYAELSHL 264 + +G + L L+ + L + + ++ V SL+DFG GY+ L +L Sbjct: 867 VQAAVDHYGIDPALLKLELTESILLENVDTTIKRMSALKKTGVGFSLDDFGTGYSSLQYL 926 Query: 265 QNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSKQLHIDVIADGIETKKQAGYMIERG 324 + +P + + ++ +I S+S I +TII +++ + + VIA+G+ET++Q ++ +G Sbjct: 927 KRLPLDQLKIDQSFMQEITSDSSDMAIVSTIIAMAQSMQMGVIAEGVETEEQRQLLLRKG 986 Query: 325 VKYLKGIALSSPLPADAFVRKL 346 + +G S P+P + F + L Sbjct: 987 CNHFQGYLFSKPVPVEQFEKLL 1008 >UniRef50_Q3SJL3 Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) and Response Regulator Receiver modulation n=1 Tax=Thiobacillus denitrificans ATCC 25259 RepID=Q3SJL3_THIDA Length = 836 Score = 339 bits (870), Expect = 1e-91, Method: Composition-based stats. Identities = 63/350 (18%), Positives = 133/350 (38%), Gaps = 17/350 (4%) Query: 5 KIKLNLIDYDSIVNIEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIK-TVSCQKMKL 63 + + L D + NI P +L ++ ++ + S+ +V Sbjct: 476 EFTIVLGDLSHVDNI--PAILHKVRAAFE----TPLVISGQEVYASFSVGVSVYPHDGDD 529 Query: 64 YKKLNVKSDLTLWRD---VFLRFKAYLQPKNIICDNFNSSVLPVVSSKGESMAHYNIYYQ 120 L +D ++R R++ Y N S L + + ++YQ Sbjct: 530 GATLLKNADTAMYRSKASGRNRYQFYAPEMNARGQELLS--LETDLRRALDRGEFRLHYQ 587 Query: 121 PIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHI----NKLFSP 176 P + ++ IAG + + K+ A D + + + + + + Sbjct: 588 PQLDLRDNRIAGVEALLRWKHPRDGVIAP-GDFVPLLEDTGLIVPVGEWVLRNACTQYRA 646 Query: 177 IKNNLPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQ 236 + + I++N++ + R+ ++ L L+ + + + Sbjct: 647 CRESGVAPVRISVNVSARQFREDTLLRQVEQVLREECMPPHHLELEITESTAMQDVAATG 706 Query: 237 SSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTII 296 L + V L+++DFG GY+ L++L+ P + + + D ++ IA I Sbjct: 707 DILAALDALGVRLAIDDFGTGYSSLAYLKRFPLDALKIDQAFIRDAPRDANIAAIAEASI 766 Query: 297 DLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKL 346 L +L ++V+A+G+ET +Q ++ R ++G S PLPADA L Sbjct: 767 SLGHKLGLEVVAEGVETAEQLAFLRRRACDLIQGFHFSRPLPADALTPFL 816 >UniRef50_C7CCD7 Putative diguanylate cyclase (GGDEF) /phosphodiesterase (EAL), with GAF and two PAS/PAC sensor domains n=1 Tax=Methylobacterium extorquens DM4 RepID=C7CCD7_METED Length = 1028 Score = 339 bits (870), Expect = 1e-91, Method: Composition-based stats. Identities = 64/349 (18%), Positives = 137/349 (39%), Gaps = 9/349 (2%) Query: 6 IKLNLIDYDSIV-NIEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIKTV-SCQKMKL 63 ++L ++ IV +++ S + ++ + + + SI + Sbjct: 660 VRLGGDEFAIIVSHLDHARQASVLAQRVIDAVGQPLDLGGHLVTVGISIGIAFAPTNGDT 719 Query: 64 YKKLNVKSDLTLWRDV---FLRFKAYLQPKNIICDNFNSSVLPVVSSKGESMAHYNIYYQ 120 + L +DL L+R + Y + + L + + + ++YQ Sbjct: 720 SETLFKNADLALYRAKASARNTYCFYEAGMDAAVEA--RMQLEFEMREAITCGSFALHYQ 777 Query: 121 PIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINKLFSPIKNN 180 P+ + I G + + + A D + I + L + + Sbjct: 778 PVLRLADHRIVGFEALMRWPHPKRGMIAPD-EFIPSAEETGLIVPLGSWALQEACREAAS 836 Query: 181 LPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSLR 240 P I +N++ +E+ + + G RLVL+ + + + L Sbjct: 837 WPDHLRIAVNVSAVQFQQPGLEQGVMSALAASGLAPHRLVLEVTESVLVQDAEAVIACLH 896 Query: 241 RIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSK 300 R+++ V ++L+DFG GY+ LS+L+ PF + + ++ +I + I ++ ++ Sbjct: 897 RLKSLGVRIALDDFGTGYSSLSYLRRFPFDRIKIDRSFISEIG-DPGAAAIVRAVVGIAM 955 Query: 301 QLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLLAS 349 QL V A+G+ET Q + G ++G +S PLPAD + + +S Sbjct: 956 QLGATVTAEGVETTAQLEQVRSEGCMEVQGYLVSRPLPADRAIEFISSS 1004 >UniRef50_C7RJ77 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RJ77_9PROT Length = 1399 Score = 339 bits (870), Expect = 1e-91, Method: Composition-based stats. Identities = 47/328 (14%), Positives = 124/328 (37%), Gaps = 17/328 (5%) Query: 32 LLSQLLKGYSVNEISKRRNRSIKT-VSCQKMKLYKKLNVKSDLTLWRDV------FLRFK 84 LL + Y + + + S + + ++ L++ +D ++R + F Sbjct: 1076 LLEVMAPAYRIEQHELTCSLSAGIAMYPADGESFEALSMSADTAMYRAKQSGRNAYCFFT 1135 Query: 85 AYLQPKNIICDNFNSSVLPVVSSKGESMAHYNIYYQPIYNAKNGNIAGCDVTIALKNSDG 144 A +Q ++ + + + ++YQP + + + G + + ++ Sbjct: 1136 AEMQERSA-----RNLQIENDLRRALENGELRLHYQPQFTLADRRLVGAEALLRWQHPQL 1190 Query: 145 SAFALDSDRINYNPNDNKVSYLFGHINK----LFSPIKNNLPHGFFITININPEDILTCD 200 + + I + + + + + + +N++ Sbjct: 1191 GMVSP-VEFIPIAEECGLILPIGEWVLRAAVSQLRVWQQEGLPPMTVAVNLSAVQFRQAS 1249 Query: 201 IERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSLRRIRNNNVYLSLNDFGMGYAE 260 + + G L L+ + + +++ ++R V +S++DFG GY+ Sbjct: 1250 LTDVVSRILDAEGLAAQFLELELTESVAMDNPLAAIATMDKLRALGVRMSIDDFGTGYSS 1309 Query: 261 LSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSKQLHIDVIADGIETKKQAGYM 320 +S+L+ + + ++ D+ ++ + I T I L++ L + IA+G+E++ Q ++ Sbjct: 1310 MSYLKRFRVHKLKIDRSFVADLAADPEDEAIVTATISLARDLGLQTIAEGVESEAQLAFL 1369 Query: 321 IERGVKYLKGIALSSPLPADAFVRKLLA 348 +G +G S PL F + A Sbjct: 1370 RAKGCDEAQGYLFSRPLAPAQFAAFVRA 1397 >UniRef50_A1K4Z0 EAL/GGDEF/PAS/PAC-domain containing signalling protein n=2 Tax=Rhodocyclaceae RepID=A1K4Z0_AZOSB Length = 880 Score = 339 bits (869), Expect = 1e-91, Method: Composition-based stats. Identities = 65/337 (19%), Positives = 132/337 (39%), Gaps = 17/337 (5%) Query: 28 IEIELLSQLLKGYSVNEISKRRNRSIKT-VSCQKMKLYKKLNVKSDLTLWRD------VF 80 I ++L+ L + + SI + L +D ++R F Sbjct: 541 IARKILAALTEPCRLGPHELTVTGSIGIALYPGDGADPSMLLRNADAAMYRAKADGRNGF 600 Query: 81 LRFKAYLQPKNIICDNFNSSVLPVVSSKGESMAHYNIYYQPIYNAKNGNIAGCDVTIALK 140 + A + ++ +L +Y+QP NA +G I GC+ + + Sbjct: 601 QFYAADMNTHSL-----GELLLEHQLRGALDRNELRLYFQPKVNAADGCIEGCEALLRWQ 655 Query: 141 NSDGSAFALDSDRINYNPNDNKVSYLFGHINK-LFSPIKNNLPHGF---FITININPEDI 196 + D A + + + + + ++ + G + +N++ + Sbjct: 656 HPDLGLLAP-GRFVPAAEESGLIVPIGEWVLREACRQLRAWIDAGLAPVPVAVNLSGQQF 714 Query: 197 LTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSLRRIRNNNVYLSLNDFGM 256 DI + L L+ + + + R ++L +R V L+++DFG Sbjct: 715 AHQDIVALVREALAEHRLPAPMLELELTETMLMRDLERTIATLAELRAMGVTLAIDDFGT 774 Query: 257 GYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSKQLHIDVIADGIETKKQ 316 GY+ L++L+ + + + ++ HDI S IAT +I L+ L + V A+G+ET Q Sbjct: 775 GYSSLAYLRQFDVNALKIDRSFVHDIRPGSSDGKIATAVIALAHNLGLTVTAEGVETAAQ 834 Query: 317 AGYMIERGVKYLKGIALSSPLPADAFVRKLLASLKQV 353 ++ G L+G P PA+AF ++L ++ Sbjct: 835 QHFLARHGCDQLQGFLFGQPEPAEAFAQRLADDDRRA 871 >UniRef50_A1K2X7 GGDEF/EAL/PAS/PAC/GAF-domain containing protein n=1 Tax=Azoarcus sp. BH72 RepID=A1K2X7_AZOSB Length = 1070 Score = 339 bits (869), Expect = 1e-91, Method: Composition-based stats. Identities = 57/321 (17%), Positives = 121/321 (37%), Gaps = 16/321 (4%) Query: 32 LLSQLLKGYSVNEISKRRNRSIK-TVSCQKMKLYKKLNVKSDLTLW------RDVFLRFK 84 L + L + + +++ S SI ++ + L +D+ ++ R+V F Sbjct: 747 LQAALAEPFRLDDRSFFVTCSIGVSLYPRDGGDGDTLLKHADIAMYQAKAAGRNVVRFFT 806 Query: 85 AYLQPKNIICDNFNSSVLPVVSSKGESMAHYNIYYQPIYNAKNGNIAGCDVTIALKNSDG 144 A + + + L ++ +QP + +G + G + + ++ + Sbjct: 807 AEMNIQVR-----DRLQLEGALRSALENGELHLAFQPQVDGGSGQVIGAEALLRWQHPEL 861 Query: 145 SAFALDSDRINYNPNDNKVSYLFGHINKLFSPIKNNLPHG---FFITININPEDILTCDI 201 A I + + + + I +N++ + D+ Sbjct: 862 GAV-PPVRFIPLAEETGLIGPIGEWVLRAACRQARQWEQAGRRLRIAVNVSARQFRSPDL 920 Query: 202 ERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSLRRIRNNNVYLSLNDFGMGYAEL 261 + G L L+ + + + + L R++ V L+L+DFG GY+ Sbjct: 921 PARIAEILDETGLPPALLELELTESMLMGDAEQAEEMLHRLKQLGVSLALDDFGTGYSSF 980 Query: 262 SHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSKQLHIDVIADGIETKKQAGYMI 321 ++LQ P + + ++ + + + I II L+ L + VIA+G+ET Q + Sbjct: 981 AYLQRFPIDTLKIDQSFVRSMVAGVRGEAIVVAIIALAHSLGMRVIAEGVETPLQQRQLF 1040 Query: 322 ERGVKYLKGIALSSPLPADAF 342 E G L+G P+PA F Sbjct: 1041 EFGCDELQGYLFGRPVPAAEF 1061 >UniRef50_Q1NRJ4 PAS:GGDEF:EAL:GAF n=5 Tax=Deltaproteobacteria RepID=Q1NRJ4_9DELT Length = 1052 Score = 338 bits (868), Expect = 2e-91, Method: Composition-based stats. Identities = 54/323 (16%), Positives = 125/323 (38%), Gaps = 6/323 (1%) Query: 32 LLSQLLKGYSVNEISKRRNRSIK-TVSCQKMKLYKKLNVKSDLTLWRDVFLRFKAYLQPK 90 +L K + + SI T+ + + L + ++ ++ + Sbjct: 727 VLELFSKPFQAADHQLYLTPSIGITLFPDDGEEVESLIQSVETAMYHAKKDGGNSFQFFQ 786 Query: 91 N-IICDNFNSSVLPVVSSKGESMAHYNIYYQPIYNAKNGNIAGCDVTIALKNSDGSAFAL 149 + + + + + +YYQP A + G + I + Sbjct: 787 ETMFTAALGRMTMKNRLRRAVELEEFELYYQPKIAADGRTVVGAEALIRWVQPERGGPVS 846 Query: 150 DSDRINYNPNDNKVSYLFGHINKLFSP----IKNNLPHGFFITININPEDILTCDIEREC 205 ++ I + + + + + I +N++ ++ E Sbjct: 847 PAEFIPLAEETGLIIPIGEWVLRQACRQSLLWQQAGLPPLRIAVNLSAVQFKQPGLDDEI 906 Query: 206 LHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSLRRIRNNNVYLSLNDFGMGYAELSHLQ 265 ++ G L L+ + + + ++L ++++ ++L+L+DFG GY+ LS+L+ Sbjct: 907 NWILQEIGLPAELLELEITESLLMEDVTTANATLWKLKDMGIHLALDDFGTGYSSLSYLK 966 Query: 266 NIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSKQLHIDVIADGIETKKQAGYMIERGV 325 N P + + + D+ ++ + TII L+ L ++V+A+G+E Q ++ +RG Sbjct: 967 NFPLDTLKIDREFVRDLSTDDEDRAVIITIITLAHSLKMEVVAEGVEDADQVAFLRQRGC 1026 Query: 326 KYLKGIALSSPLPADAFVRKLLA 348 +G S PLPA F + L + Sbjct: 1027 DVFQGYHFSRPLPAKEFEQFLRS 1049 >UniRef50_A0LA87 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Magnetococcus sp. MC-1 RepID=A0LA87_MAGSM Length = 1070 Score = 338 bits (868), Expect = 2e-91, Method: Composition-based stats. Identities = 62/340 (18%), Positives = 139/340 (40%), Gaps = 11/340 (3%) Query: 15 SIVNIEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIKTV-SCQKMKLYKKLNVKSDL 73 ++V+++ ++ + LL Q + + VN ++ V + + L + Sbjct: 714 TLVDLKQEGEITGVANNLLKQFVMPFLVNGHELMLRTAMGIVLYPTDGQDAETLLRHVEN 773 Query: 74 TL---WRDVFLRFKAYLQPKNIICDNFNSSVLPVVSSKGESMAHYNIYYQPIYNAKNGNI 130 L + ++ Y + + I + L + +YYQP N + G + Sbjct: 774 ALGQAKQQGVNNYRFYSEEMSNISN--KRLALEQEMHTALEQRDFVLYYQPKVNLQRGVV 831 Query: 131 AGCDVTIALKNSDGSAFALDSDRINYNPNDNKVS----YLFGHINKLFSPIKNNLPHGFF 186 +G + I ++ + + I + ++ I + L F Sbjct: 832 SGVESLIRWQHKQKGMISP-VEFIPVAEETGLIVPMGLWILETACAEAKRITDYLGQPFT 890 Query: 187 ITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSLRRIRNNN 246 + +N++ + ++ + + L + + + + + +L IRN Sbjct: 891 VAVNLSARQFQSRNLLESISETLNNSAIDPSMLEFEITESMMMGNVEKSIETLVAIRNMG 950 Query: 247 VYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSKQLHIDV 306 V L+++DFG GY+ LS+L+ P + + + ++ D+ +S I + II +++ L++ V Sbjct: 951 VTLAIDDFGTGYSSLSYLKRFPINTLKIDQSFIRDLGVDSDDAAIVSAIISMAQDLNLHV 1010 Query: 307 IADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKL 346 +A+G E +Q ++ ERG + ++G S PLP R L Sbjct: 1011 VAEGAEKAEQVLFLKERGCETVQGYYFSRPLPQTDLERLL 1050 >UniRef50_D1T5E1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Burkholderia sp. CCGE1002 RepID=D1T5E1_9BURK Length = 1055 Score = 338 bits (867), Expect = 2e-91, Method: Composition-based stats. Identities = 57/328 (17%), Positives = 124/328 (37%), Gaps = 17/328 (5%) Query: 34 SQLLKGYSVNEISKRRNRSIK-TVSCQKMKLYKKLNVKSDLTLWRDV------FLRFKAY 86 + + + ++ S+ ++ Q + L K+D+ ++R F ++ Sbjct: 727 ASIAEPVWLDGTELYVGCSMGASLFPQDGDDAETLMKKADVAMYRAKDMGRNTFQFYQPE 786 Query: 87 LQPKNIICDNFNSSVLPVVSSKGESMAHYNIYYQPIYNAKNGNIAGCDVTIALKNSDGSA 146 + N + + + ++YQP + +G I G + + + + Sbjct: 787 MNASAGARLNLERRLRRALRD-----NEFLLHYQPQVDIVSGQIVGIEALVRWHDPEAG- 840 Query: 147 FALDSDRINYNPNDNKVSYLFGHINK-LFSPIKNNLPHGF---FITININPEDILTCDIE 202 S I + L + + K G +++N++ +I Sbjct: 841 LVPPSSFIPLAEESGLIGPLSEWVLREACRQNKAWQDQGLPPARVSVNLSARVFQQRNIA 900 Query: 203 RECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSLRRIRNNNVYLSLNDFGMGYAELS 262 + + + G E L L+ + + L + + L+++DFG GY+ LS Sbjct: 901 KLVMQVLAETGLEPRYLELELTESTIMRNAEEAVLMLNELHALGIGLAIDDFGTGYSSLS 960 Query: 263 HLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSKQLHIDVIADGIETKKQAGYMIE 322 +L+ P + + ++ DI + + I + II L+ L + VIA+G+ET Q ++ E Sbjct: 961 YLKRFPVDRLKIDRSFVSDIGVSGDDETITSAIIALAHSLKLQVIAEGVETSAQLDFLKE 1020 Query: 323 RGVKYLKGIALSSPLPADAFVRKLLASL 350 R ++G + PL + L L Sbjct: 1021 RACDEMQGFYFAKPLSTEGISELLHGGL 1048 >UniRef50_Q47UD6 Sensory box sensor/GGDEF/EAL domain protein n=1 Tax=Colwellia psychrerythraea 34H RepID=Q47UD6_COLP3 Length = 921 Score = 338 bits (867), Expect = 2e-91, Method: Composition-based stats. Identities = 68/332 (20%), Positives = 139/332 (41%), Gaps = 11/332 (3%) Query: 28 IEIELLSQLLKGYSVNEISKRRNRSIK-TVSCQKMKLYKKLNVKSDLTLWR---DVFLRF 83 L S L +N + SI T+ ++L +D+ +++ D Sbjct: 578 FAQRLNSLLKTPIEINGNNINMGSSIGITIYPDDAANSEELLRNADIAMYQAKDDGRNTV 637 Query: 84 KAYLQPKNIICDNFNSSVLPVVSSKGESMAHYNIYYQPIYNAKNGNIAGCDVTIALKNSD 143 + + N + + ++ + H+ +YYQP++ + G + I + + Sbjct: 638 RFFTSEMNARLQ--RNKEVLTDLAESLTKEHFELYYQPLFTIDQNILVGAEALIRWHHPE 695 Query: 144 GSAFALDSDRINYNPNDNKVSYLFGHIN-KLFSPIKNNLPHG---FFITININPEDILTC 199 D I ++ L + + IKN L G F + INI+P Sbjct: 696 KGMIPPD-QFIAVAEKSGLINELGDWVLAQACREIKNFLNAGITVFKVAINISPVQFRRK 754 Query: 200 DIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSLRRIRNNNVYLSLNDFGMGYA 259 D+ + L + + L+ + + + + +++ + + L+++DFG GY+ Sbjct: 755 DLLQHMLMILAQHDVSAELIELEITEGAVMDNVDQAIETMQALHDAGFQLAMDDFGTGYS 814 Query: 260 ELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSKQLHIDVIADGIETKKQAGY 319 LS+L+ P V + ++ D+E++ + I T II +S L + V+A+G+ET++Q Y Sbjct: 815 SLSYLKRFPIQKVKIDRSFISDLENDDDSKSITTAIIQMSHSLGLHVLAEGVETEEQLHY 874 Query: 320 MIERGVKYLKGIALSSPLPADAFVRKLLASLK 351 + Y++G P+PA F++ S K Sbjct: 875 LQAEKCDYVQGYYTGRPIPASEFIKNFSESKK 906 >UniRef50_B7KRA3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=6 Tax=Alphaproteobacteria RepID=B7KRA3_METC4 Length = 954 Score = 338 bits (867), Expect = 2e-91, Method: Composition-based stats. Identities = 60/332 (18%), Positives = 135/332 (40%), Gaps = 14/332 (4%) Query: 26 SEIEIELLSQLLKGYSVNEISKRRNRSIK-TVSCQKMKLYKKLNVKSDLTLWR------D 78 S + L++ + + ++ + SI +++ + +KL +DL L+R Sbjct: 625 SALAKRLIAAFQQPFLLDGHTVTVGLSIGISLAPEHGTSPEKLLKSADLALYRAKATGRG 684 Query: 79 VFLRFKAYLQPKNIICDNFNSSVLPVVSSKGESMAHYNIYYQPIYNAKNGNIAGCDVTIA 138 + F + + L K + + +QPI IA C+ + Sbjct: 685 CWAFFDEEMD-----VELRKRRALESDLKKAVGNGEFELVFQPIVKLDRQRIASCEALLR 739 Query: 139 LKNSDGSAFALDSDRINYNPNDNKVSYLFGHINKLFSPIKNNLPHGFFITININPEDILT 198 ++ + + +D I + + + + P + +N++ Sbjct: 740 WRHPERGYVSP-ADFIPLAEETGTIGEIGEWVLRKACSEAATWPSNIRVAVNVSAAQFKN 798 Query: 199 CDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSLRRIRNNNVYLSLNDFGMGY 258 + R + + G RL L+ + L ++L ++ V ++++DFG G+ Sbjct: 799 AAVVRAVMDALAASGLPAHRLELEITESVLLNDSVTTLATLHTLKRLGVRVAMDDFGTGF 858 Query: 259 AELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSKQLHIDVIADGIETKKQAG 318 + LS+LQ+ PF + + ++ ++ + + +I +++ L + L I A+GIET+ Q Sbjct: 859 SSLSYLQSFPFDKIKIDQSFVRNLAAPGNSRLIVRSVVGLGRSLGITTTAEGIETEAQLE 918 Query: 319 YMIERGVKYLKGIALSSPLPADAFVRKLLASL 350 + G +G S P+P A +R+L+ +L Sbjct: 919 QLRLEGCDEGQGYLFSRPVP-SATIRELVTAL 949 >UniRef50_C5V1I4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Gallionellaceae RepID=C5V1I4_9PROT Length = 935 Score = 338 bits (867), Expect = 2e-91, Method: Composition-based stats. Identities = 67/366 (18%), Positives = 148/366 (40%), Gaps = 29/366 (7%) Query: 5 KIKLNLIDYDSIVNI---EFPCLLSEI---------EIELLSQLLKGYSVNEISKRRNRS 52 ++K L D+I + EF LLSE+ +++ L + +++ E S Sbjct: 574 RLKTCLRRSDTIARLGGDEFVALLSELDSSEEVIFVAEKMIESLTEKFTLGEYQLSITPS 633 Query: 53 IKT-VSCQKMKLYKKLNVKSDLTLW------RDVFLRFKAYLQPKNIICDNFNSSVLPVV 105 I + + +L +DL ++ R+ F + + K + L Sbjct: 634 IGICIYPDDGETSVELLRNADLAMYQAKDDGRNNFKFYSPDMNRKAL-----ERLKLETF 688 Query: 106 SSKGESMAHYNIYYQPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSY 165 ++YYQP + +G + G + + ++ + + + I ++ Sbjct: 689 LRVAIVQQQLSVYYQPKVSVLSGKMTGMEALLRWQHPELGFISP-AVFIPIAEETGLINE 747 Query: 166 LFGHINKL----FSPIKNNLPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVL 221 + + + + I +N++ + + + ++ G + LVL Sbjct: 748 IGDWVLRQSCLQARLWQAQGYDIVPIAVNLSARQLKQDNFAARVVTILREAGLDAHYLVL 807 Query: 222 QFSTKEELYIIRRYQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHD 281 + + + L ++R++ V L+L+DFG GY+ LS L+N+P + + ++ D Sbjct: 808 EITESMLMSTGESGLQILEQLRDDGVRLALDDFGTGYSSLSRLKNLPLDSLKIDQSFVRD 867 Query: 282 IESNSLTDIIATTIIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADA 341 I ++ I + L+ L++ V A+G+ET++Q ++ + +G S P+PA Sbjct: 868 IVTDPNDASIVSATAVLAHALNLKVTAEGVETQEQLDFIRMLNCEEYQGYLFSRPIPASE 927 Query: 342 FVRKLL 347 V+ L Sbjct: 928 VVKYFL 933 >UniRef50_C6XAG8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6XAG8_METSD Length = 950 Score = 338 bits (867), Expect = 2e-91, Method: Composition-based stats. Identities = 68/329 (20%), Positives = 138/329 (41%), Gaps = 19/329 (5%) Query: 28 IEIELLSQLLKGYSVNEISKRRNRSIK-TVSCQKMKLYKKLNVKSDLTLW------RDVF 80 + ++L + + + SI T+ Q+ ++ ++DL ++ R+V Sbjct: 620 VSEKILISFAHPFQFSGYEHHTSASIGVTLFDQQPTTVDEILKRADLAMYQSKAAGRNVI 679 Query: 81 LRFKAYLQPKNIICDNFNSSVLPVVSSKGESMAHYNIYYQPIYNAKNGNIAGCDVTIALK 140 F +Q +I D + G + + YQP + + G + G + + + Sbjct: 680 RFFDPEMQ--ALIADRV---EMEEDLRNGLRNDEFFLCYQPQVDNQ-GRLLGAEALLRWR 733 Query: 141 NSDGSAFALDSDRINYNPNDNKVSYLFGHINKLFS-----PIKNNLPHGFFITININPED 195 N S I + + + + + L + +N++ + Sbjct: 734 NPKRGMI-PPSTFIPLAEDSGLIVSVGNWVMYAACKQLVLWAQQPLTSSLTLAVNVSAKQ 792 Query: 196 ILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSLRRIRNNNVYLSLNDFG 255 + D + + + V G RL L+ + + I + + ++N V S++DFG Sbjct: 793 LRQMDFVDQIVEVLNVTGANPKRLKLELTESLMVNNIEDVIAKMTELKNIGVGFSIDDFG 852 Query: 256 MGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSKQLHIDVIADGIETKK 315 +GY+ LS+L+ +P + + ++ D+ ++ +IA TII L K L++ VIA+G+ET Sbjct: 853 IGYSSLSYLKLLPLDQLKIDQSFVRDVLTDPNDAVIARTIIALGKSLNLQVIAEGVETLS 912 Query: 316 QAGYMIERGVKYLKGIALSSPLPADAFVR 344 Q ++ G +G S P+PAD F R Sbjct: 913 QREFLDNYGCDAYQGYLFSKPVPADEFER 941 >UniRef50_Q3SK01 Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC and GAF sensor(S) n=1 Tax=Thiobacillus denitrificans ATCC 25259 RepID=Q3SK01_THIDA Length = 1059 Score = 337 bits (866), Expect = 2e-91, Method: Composition-based stats. Identities = 60/334 (17%), Positives = 137/334 (41%), Gaps = 19/334 (5%) Query: 24 LLSEIEIELLSQLLKGYSVNEISKRRNRSIKTVSCQK-MKLYKKLNVKSDLTLW------ 76 L + + ++L+ + + + + SI +L ++DL ++ Sbjct: 715 LATRVGEKILASFARPFQLADYVHHCTASIGITLFNDRPTTLDELRKRADLAMYQAKAHG 774 Query: 77 RDVFLRFKAYLQPKNIICDNFNSSVLPVVSSKGESMAHYNIYYQPIYNAKNGNIAGCDVT 136 R+ F +Q + L V + + + ++YQ +A+ G ++G + Sbjct: 775 RNALRFFDPAMQ-----AVVAARAELEVDLREALRLGAFELHYQAQVDAR-GCVSGAEAL 828 Query: 137 IALKNSDGSAFALDSDRINYNPNDNKVSYLFGHIN-----KLFSPIKNNLPHGFFITINI 191 + ++ A + I + L + +L + K + +N+ Sbjct: 829 LRWQHPQRGWIAP-ASFIPLAEETGLILPLGLWVLDVACAQLVAWSKMPHMARLSLAVNV 887 Query: 192 NPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSLRRIRNNNVYLSL 251 + D + L I+ G + RL L+ + L + + ++ + + SL Sbjct: 888 SARQFRQADFAAQVLAAIERSGADPRRLKLELTESLMLDNLDDTILKMSALKAHGIGFSL 947 Query: 252 NDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSKQLHIDVIADGI 311 +DFG GY+ L++L+ +P + + ++ D+ ++ IA +I+ L + L+++V+A+G+ Sbjct: 948 DDFGTGYSSLAYLKRLPLDEIKIDQSFVRDVLIDANDASIARSILALGQSLNLEVVAEGV 1007 Query: 312 ETKKQAGYMIERGVKYLKGIALSSPLPADAFVRK 345 ET Q ++ E G + +G + P PA F Sbjct: 1008 ETDAQHAFLAEHGCQAYQGYLFNRPQPARQFEAW 1041 >UniRef50_Q89WT2 Bll0596 protein n=1 Tax=Bradyrhizobium japonicum RepID=Q89WT2_BRAJA Length = 833 Score = 337 bits (866), Expect = 3e-91, Method: Composition-based stats. Identities = 60/327 (18%), Positives = 126/327 (38%), Gaps = 14/327 (4%) Query: 28 IEIELLSQLLKGYSVNEISKRRNRSIKT-VSCQKMKLYKKLNVKSDLTLW------RDVF 80 + + L + + + + SI ++ + + +DL L+ R F Sbjct: 502 LAENIRKALCEPFDLGDHRVTVGTSIGIAIAPRDGNDSDVIMKSADLALYSAKSGGRGAF 561 Query: 81 LRFKAYLQPKNIICDNFNSSVLPVVSSKGESMAHYNIYYQPIYNAKNGNIAGCDVTIALK 140 F+ L N + + + + ++YQP + G + G + + Sbjct: 562 RFFEPELDELMHARRNLERDMRDAIVGR-----QFELHYQPFVSPATGKVNGFEALLRWH 616 Query: 141 NSDGSAFALDSDRINYNPNDNKVSYLFGHINKLFSPIKNNLPHGFFITININPEDILTCD 200 + + S+ I + L + + P I +N++P + + Sbjct: 617 HPQQG-LVMPSEFIPLAEETGLIVPLGEWVLRAACAEAAKWPPHVRIAVNLSPAQFRSKE 675 Query: 201 IERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSLRRIRNNNVYLSLNDFGMGYAE 260 + + + G RL L+ + ++ + L ++R V ++L+DFG GY+ Sbjct: 676 LVPVVIGALASSGVAPHRLELEVTETVIMHDSEAVFAVLGQLRELGVRIALDDFGTGYSS 735 Query: 261 LSHLQNIPFSYVNLHKTMFHDIES-NSLTDIIATTIIDLSKQLHIDVIADGIETKKQAGY 319 LS LQ PF + + ++ +++ S + +A ++ + L A+G+ETK+Q Sbjct: 736 LSFLQKFPFDKIKIDRSFVNELSSARAEARHLARAVVRFAVSLGKTTTAEGVETKEQLDI 795 Query: 320 MIERGVKYLKGIALSSPLPADAFVRKL 346 + E G +G S P+PA R L Sbjct: 796 LCEEGCLETQGYYFSRPMPASDIARML 822 >UniRef50_A0YLL7 Putative uncharacterized protein n=1 Tax=Lyngbya sp. PCC 8106 RepID=A0YLL7_9CYAN Length = 872 Score = 337 bits (866), Expect = 3e-91, Method: Composition-based stats. Identities = 57/338 (16%), Positives = 131/338 (38%), Gaps = 7/338 (2%) Query: 18 NIEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIKT-VSCQKMKLYKKLNVKSDLTLW 76 ++ +++I +L +L + ++ S+ + + + L +D ++ Sbjct: 524 HLTSTDEITKIAHRILDKLSIPFVIDNQELYVTASLGIALCPYDAEDAQTLLKHADAAMY 583 Query: 77 RDVFLRFKAYLQP-KNIICDNFNSSVLPVVSSKGESMAHYNIYYQPIYNAKNGNIAGCDV 135 R + + + + N L + + +YYQP G I G + Sbjct: 584 RAKKQGRNNFQVFAEEMHREALNQLTLEADLRRALIKEEFLLYYQPQVEISTGKIVGLEA 643 Query: 136 TIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINKLFSPIKNNLP----HGFFITINI 191 I ++ D I ++ + + + + I +N+ Sbjct: 644 LIRWQHPTLGFVPPD-QFIPLAEEIGLIAPIGQWVLQTACIQHQSWQAEGLPPVRIAVNL 702 Query: 192 NPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSLRRIRNNNVYLSL 251 + + L ++ + L L+ + + + +L+ +R +++++ Sbjct: 703 SARQFHQSQLINIILQTLETTEIDPQYLELEITESAAMQDVEFTIQTLQELREMGLHITI 762 Query: 252 NDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSKQLHIDVIADGI 311 +DFG GY+ L+ L++ P + + + ++ DI NS IA TI+ LS+ L + V+A+G+ Sbjct: 763 DDFGTGYSSLNVLKHFPLNTLKIDRSFVQDIVENSRDAAIAQTIVALSQGLKLKVVAEGV 822 Query: 312 ETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLLAS 349 ET +Q ++ +G P+PA + L S Sbjct: 823 ETPQQLSFLRSIHCDLAQGYYFCPPVPAIEIAKLLRQS 860 >UniRef50_A1K3A1 GGEF/EAL/PAS/PAC-domain containing protein n=1 Tax=Azoarcus sp. BH72 RepID=A1K3A1_AZOSB Length = 818 Score = 337 bits (866), Expect = 3e-91, Method: Composition-based stats. Identities = 55/318 (17%), Positives = 120/318 (37%), Gaps = 6/318 (1%) Query: 30 IELLSQLLKGYSVNEISKRRNRSIKTVSCQKMKLYKKLNVKSDLTLWRDVFLRFKAY-LQ 88 I+LL+Q + S E+ + I ++ +L +D L++ Y Sbjct: 495 IDLLNQSFQLASGQEVFVGASIGI-SLYPLDTDDATQLISNADAALYQAKEAGRNVYRFY 553 Query: 89 PKNIICDNFNSSVLPVVSSKGESMAHYNIYYQPIYNAKNGNIAGCDVTIALKNSDGSAFA 148 ++ L +G + +++QP+ G + G + + + A Sbjct: 554 TADLTRAAHERLGLEAALRRGLERGEFVLHFQPVVALDKGEVVGAEALVRWNHPTEGMIA 613 Query: 149 LDSDRINYNPNDNKVSYLFGHINKLFSPIKNNL---PHGFFITININPEDILTCDIEREC 205 I + L + + I +N++ D+ Sbjct: 614 P-LRFIPLAEETGLIVPLGEWVLESACRQGREWLDCGRPLTIAVNLSTRQFRAGDLTATV 672 Query: 206 LHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSLRRIRNNNVYLSLNDFGMGYAELSHLQ 265 + G L L+ + + R ++L ++ V LS++DFG GY+ L++L+ Sbjct: 673 RDILDRTGFPAALLELEITESTVMEDADRAVATLAALKGLGVRLSIDDFGTGYSSLAYLK 732 Query: 266 NIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSKQLHIDVIADGIETKKQAGYMIERGV 325 + + ++ DI + +I T++ ++ Q+ + VIA+G+ET +Q ++ G Sbjct: 733 RFAVDALKIDRSFVRDIADDENDRMIVATVVAMAHQMRLGVIAEGVETAEQLAFLRSLGC 792 Query: 326 KYLKGIALSSPLPADAFV 343 + +G + P A F+ Sbjct: 793 EAYQGYLVGRPQAAADFL 810 >UniRef50_A1ATC4 Periplasmic sensor diguanylate cyclase/phosphodiesterase n=1 Tax=Pelobacter propionicus DSM 2379 RepID=A1ATC4_PELPD Length = 876 Score = 337 bits (866), Expect = 3e-91, Method: Composition-based stats. Identities = 58/327 (17%), Positives = 129/327 (39%), Gaps = 11/327 (3%) Query: 28 IEIELLSQLLKGYSVNEISKRRNRSIK-TVSCQKMKLYKKLNVKSDLTLWRDVF---LRF 83 + ++L + + + S+ T+ +KL +D ++ + Sbjct: 533 VAEKILHVFSAPFRLEKHEMFITASMGVTLYPNDGDTAEKLLKNADTAMYHAKEEGRNTY 592 Query: 84 KAYLQPKNIICDNFNSSVLPVVSSKGESMAHYNIYYQPIYNAKNGNIAGCDVTIALKNSD 143 + + + N S + + + ++YQP N G I G + I + Sbjct: 593 QFFSEEMNSRVSERLS--METGLRHALARNEFLLHYQPRVNTTTGRIVGVEALIRWQQPQ 650 Query: 144 GSAFALDSDRINYNPNDNKVSYLFGHINK-LFSPIKNNLPHGF---FITININPEDILTC 199 D+ I + + + + + + GF I++NI+ Sbjct: 651 KGLILPDA-FIPLAEETGLIIPIGEWVLRNTCTQARAWQEAGFAQMRISVNISCRQFTHD 709 Query: 200 DIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSLRRIRNNNVYLSLNDFGMGYA 259 ++ ++ G + L L+ + + R S L ++ + ++++DFG GY+ Sbjct: 710 NLPDTIRGILRETGLQPSCLELEITESVIMLNPERAISLLNELKEMGISIAIDDFGTGYS 769 Query: 260 ELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSKQLHIDVIADGIETKKQAGY 319 LS L+ +P + + K+ I N + + TII+L + + ++A+G+E ++Q + Sbjct: 770 SLSLLKRLPADILKIDKSFVSGIPGNKSDETLVATIINLGHNMGLGLVAEGVERQEQLHF 829 Query: 320 MIERGVKYLKGIALSSPLPADAFVRKL 346 + ER + ++G S PLPA+ L Sbjct: 830 LEERNCQEVQGYYFSKPLPAETLQPLL 856 >UniRef50_Q2W154 Putative uncharacterized protein n=2 Tax=Magnetospirillum RepID=Q2W154_MAGSA Length = 802 Score = 337 bits (865), Expect = 3e-91, Method: Composition-based stats. Identities = 59/345 (17%), Positives = 140/345 (40%), Gaps = 21/345 (6%) Query: 16 IVNIEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIKT-VSCQKMKLYKKLNVKSDLT 74 + + + L+E+ ++ + L + ++ SI + + L +D Sbjct: 460 LTHFQSTTELAEVAEKISAALDEPVELSGHKVHVGASIGIAIYPDDGDNFNALMKDADTA 519 Query: 75 LWRDVFLRFKAYLQPKNIIC---DNFNSSVLPV-----VSSKGESMAHYNIYYQPIYNAK 126 ++R A + +N C N N L + + ++YQP + + Sbjct: 520 MYR-------AKQKGRNTFCFYDSNMNDEALDRLKLEEALRRALVRGEFQLFYQPQVDLQ 572 Query: 127 NGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHI----NKLFSPIKNNLP 182 G +G + I + + + + I N +S + + + + + Sbjct: 573 TGRTSGVEALIRWNSPERGQVSP-ALFIPVAEESNLISMIGWWVLEESCRQIAAWREAGL 631 Query: 183 HGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSLRRI 242 G + +N++ L + + + +L ++ + + R L R+ Sbjct: 632 TGIKVAVNVSGRQFLNHALVECISDLMAQYAVLPSQLEIELTESTVMAEPDRAIEQLTRL 691 Query: 243 RNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSKQL 302 R + +S++DFG GY+ LS+L+ +P S + + ++ D+ + S I + I+ L+ L Sbjct: 692 REIGIQVSVDDFGTGYSSLSYLKRLPLSTIKVDRSFVRDVNNQSDNAAIVSAILGLADAL 751 Query: 303 HIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLL 347 + ++A+G+ET+ + ++ + G ++G + P+PAD +L Sbjct: 752 DMSIVAEGVETEGEEQHLKDAGCIKVQGFRYAKPMPADQLAAWML 796 >UniRef50_Q9ABX9 Uncharacterized signaling protein CC_0091 n=3 Tax=Caulobacter RepID=Y091_CAUCR Length = 809 Score = 337 bits (865), Expect = 4e-91, Method: Composition-based stats. Identities = 62/332 (18%), Positives = 131/332 (39%), Gaps = 7/332 (2%) Query: 22 PCLLSEIEIELLSQLLKGYSVNEISKRRNRSIK-TVSCQKMKLYKKLNVKSDLTLWRDVF 80 P + +E+ L+ L + S+ ++ + + L +D+ L+R Sbjct: 466 PAVAAELAGRLIEMLAAPVPFDGQELAMGSSLGVSLYPDDGRTAEALMANADMALYRAKE 525 Query: 81 L---RFKAYLQPKNIICDNFNSSVLPVVSSKGESMAHYNIYYQPIYNAKNGNIAGCDVTI 137 ++ + + + + +G + ++YQP+ A +G + G + + Sbjct: 526 SGRGVYRFFKREMDDTIRERRNLARD--LRQGIADNELIVHYQPLARAADGEVCGFEALV 583 Query: 138 ALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINKLFSPIKNNLPHGFFITININPEDIL 197 K+ D I + + L + + I +N++P + Sbjct: 584 RWKHPTRGMI-PPLDFIPVAEENGLIEALGDWVLRRACADAAAWEKPLRIAVNLSPIQLH 642 Query: 198 TCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSLRRIRNNNVYLSLNDFGMG 257 + + G RL L+ + +R +LRR++ V ++++DFG G Sbjct: 643 NPALPTLVHEVLITTGLSPSRLELEITESALFKDYQRALDNLRRLKALGVRIAMDDFGTG 702 Query: 258 YAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSKQLHIDVIADGIETKKQA 317 ++ LS LQ+ PF + + K+ +I + I ++ L + L I V+A+G+ET++Q Sbjct: 703 FSSLSTLQSFPFDKIKIDKSFVENIHRHDRATAIVRAVLGLGRSLEIPVVAEGVETEEQI 762 Query: 318 GYMIERGVKYLKGIALSSPLPADAFVRKLLAS 349 ++ L+G A+ P P DA A Sbjct: 763 LFLRGEDCAELQGYAIGRPAPVDALTMWTTAG 794 >UniRef50_Q3A0D5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A0D5_PELCD Length = 1141 Score = 337 bits (865), Expect = 4e-91, Method: Composition-based stats. Identities = 68/339 (20%), Positives = 141/339 (41%), Gaps = 10/339 (2%) Query: 17 VNIEFPCLLSEIEI---ELLSQLLKGYSVNEISKRRNRSIKTVS-CQKMKLYKKLNVKSD 72 V + P EIE+ ++L L Y +N+ SI S + + L +D Sbjct: 777 VLLSGPSHEEEIELIAHKILKSLAWPYDINDHEVFMTCSIGIASYPKDGREAITLVKNAD 836 Query: 73 LTLWRDVFLRFK-AYLQPKNIICDNFNSSVLPVVSSKGESMAHYNIYYQPIYNAKNGNIA 131 L+R L ++ + + ++YQP ++G I Sbjct: 837 TALYRAKDLGRNNFQFYSSSMNARALERMAMESSLRRMFERQELRVHYQPQVGLQSGRIT 896 Query: 132 GCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINKL-FSPIKNNLPHGF---FI 187 G + + ++ G+ A S + + + + + +K L GF + Sbjct: 897 GLEGLVRWEHPVGNMIAP-SVFVPLAEETGLIVPMGEWVLQAGCYQLKTWLDAGFAPMRL 955 Query: 188 TININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSLRRIRNNNV 247 IN++ + D + +K L L+ + ++ + +LRR+R + Sbjct: 956 GINVSAHQLQKSDFAELVMQVLKECDLPPHYLNLEITETVIMHNMNEAFETLRRLRAVGI 1015 Query: 248 YLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSKQLHIDVI 307 +S++DFG G++ LS+L+++P ++ + + ++ + IA II+++ L++ VI Sbjct: 1016 TISIDDFGTGFSSLSYLKDLPADHLKIDRAFVQNLPFGNNEANIARHIIEMAHGLNLKVI 1075 Query: 308 ADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKL 346 A+G+E + Q ++ E G ++G +S PL A+ L Sbjct: 1076 AEGVENQAQLDFLREAGCDEIQGFLVSRPLAAEDITEIL 1114 >UniRef50_A5ERD3 Diguanylate cyclase/phosphodiesterase n=12 Tax=Bradyrhizobiaceae RepID=A5ERD3_BRASB Length = 902 Score = 337 bits (865), Expect = 4e-91, Method: Composition-based stats. Identities = 68/349 (19%), Positives = 138/349 (39%), Gaps = 21/349 (6%) Query: 7 KLNLIDYDSIVNIEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIKT-VSCQKMKLYK 65 +L+ ++ I++ + P + +L + + + + S R + V Sbjct: 543 RLSGDEFGLIIDGKQPETGRALAEQLAAAIAVEFQIEGKSIRTALTTGISVFPHNGPDPA 602 Query: 66 KLNVKSDLTLWR------DVFLRFKAYLQPKNIICDNFNSSVLPVVSSKGESMAHYNIYY 119 L + L+R ++ + + + VL S ++Y+ Sbjct: 603 SLLANAGAALFRAKARSRGSITFYEPEMDQQIR-----DRRVLHQELSVAIKNGELSLYF 657 Query: 120 QPIYNAKNGN------IAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINKL 173 QP A +G I G + + F SD I + + I + Sbjct: 658 QPQ--ASSGRTVDCSEIIGFEALARWHHPVRG-FVPPSDFIPLAEESGMIVEMGEWILRE 714 Query: 174 FSPIKNNLPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIR 233 + P + +N++P + D+ + G RL L+ + + Sbjct: 715 ACREAASWPKPLQVAVNLSPAQFVHGDLVALVHSILLETGLSPGRLELEITEGVLIEDFD 774 Query: 234 RYQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIAT 293 R + LRR++ V +S++DFG GY+ LS+LQ PF + + + ++ N + I Sbjct: 775 RGVALLRRLKALGVRVSMDDFGSGYSSLSYLQAFPFDKIKIDRAFVMNLGRNPQSAAIIR 834 Query: 294 TIIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAF 342 +I L +++ ++A+G+ET +Q G++ E+G ++G L PLP D + Sbjct: 835 AVIGLGHGMNMSIVAEGVETPEQLGFLAEQGCDSVQGYLLGKPLPIDKY 883 >UniRef50_D1C8G6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C8G6_SPHTD Length = 760 Score = 337 bits (864), Expect = 5e-91, Method: Composition-based stats. Identities = 49/322 (15%), Positives = 114/322 (35%), Gaps = 9/322 (2%) Query: 38 KGYSVNEISKRRNRSIKTVSCQKMKLYKK-LNVKSDLTLWRDVFLRFKAYLQPK-NIICD 95 + + V+ SI + L +D + R L + + Sbjct: 430 EPFVVDGHELVITTSIGVALGGDPDDRPEDLIRNADAAMHRAKLLGKARRVVFDPAMYAQ 489 Query: 96 NFNSSVLPVVSSKGESMAHYNIYYQPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRIN 155 L G + IYYQP+ + + + + + + + + I Sbjct: 490 AVERLALERDLRHGLERGEFQIYYQPVLDVRTRRPVEVEALVRWHHPERGLISP-GEFIP 548 Query: 156 YNPNDNKVSYLFGHI----NKLFSPIKNNLPH--GFFITININPEDILTCDIERECLHFI 209 + L + + + + P +++N++ + + + Sbjct: 549 IAEETGLIVPLGHWVLAEACRQLAAWRTAFPDCAPSAVSVNLSARQFRHPSLTADIAQIL 608 Query: 210 KVFGTERIRLVLQFSTKEELYIIRRYQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPF 269 G L L+ + + +LR ++ V L+++DFG GY+ LS+L+ P Sbjct: 609 AETGLPPASLKLEITESVMMDDTASTLEALRDLKQLGVQLAVDDFGTGYSSLSYLKRFPT 668 Query: 270 SYVNLHKTMFHDIESNSLTDIIATTIIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLK 329 + + ++ ++ + + +I + L + V +G+ET++Q ++ G ++ Sbjct: 669 DAMKIDRSFARGLDQSREDQALVEAMIAAANALRLQVTVEGVETEEQLEFLERVGCDLVQ 728 Query: 330 GIALSSPLPADAFVRKLLASLK 351 G + P+P D R L L+ Sbjct: 729 GFLFAPPMPPDEVARFLHTGLQ 750 >UniRef50_Q3A628 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A628_PELCD Length = 1063 Score = 337 bits (864), Expect = 5e-91, Method: Composition-based stats. Identities = 57/343 (16%), Positives = 131/343 (38%), Gaps = 12/343 (3%) Query: 5 KIKLNLIDYDSIVNIEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIKT-VSCQKMKL 63 + L L D D I N +E + LL++ + ++ +E SI + Q + Sbjct: 710 EFVLLLTDLDDIQNTT---SATEKFMALLTE--RPFATSECDINTTASIGIALYPQDGQD 764 Query: 64 YKKLNVKSDLTLWRDVFLRFKAYLQPKNIICDNF-NSSVLPVVSSKGESMAHYNIYYQPI 122 + L ++D ++ Y + + + + + YQP Sbjct: 765 PETLLKRADTAMYEAKKNGRNGYHFFSLQLAEQAERRHRMEINLRSALKEGEMQLVYQPQ 824 Query: 123 YNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINKLFSP----IK 178 + I G + + ++ + + + I + L + + + Sbjct: 825 IDLGKVRITGMEALLRWQSPEEGTISP-ARFIPLAEETGLIYPLGEWVLQQACRQGAIWQ 883 Query: 179 NNLPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSS 238 + +N++ + D+ + ++ G L L+ + L + + Sbjct: 884 KTEASPLCVAVNLSAKQFHQPDLAKNIKKILRETGLSPHLLELEITESVFLENMEAAIEA 943 Query: 239 LRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDL 298 L ++ V S++DFG GY+ LS+L+ +P + + + DI+++ I I + Sbjct: 944 LTELKKLGVQFSIDDFGTGYSSLSYLKKLPIDRIKIAQEFVRDIDTDDGDKAIIKATIAM 1003 Query: 299 SKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADA 341 +K L + +IA+G+E +Q +++ G ++G + P+PA Sbjct: 1004 AKSLGMKLIAEGVENHQQLAFLLLHGCHAMQGYYFAKPMPAQE 1046 >UniRef50_D0IZ49 Diguanylate cyclase/phosphodiesterase with n=2 Tax=Comamonas testosteroni RepID=D0IZ49_COMTE Length = 1115 Score = 337 bits (864), Expect = 5e-91, Method: Composition-based stats. Identities = 65/355 (18%), Positives = 141/355 (39%), Gaps = 25/355 (7%) Query: 5 KIKLNLIDYDSIVNIEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIKTVSCQKMKLY 64 L + D S ++ L + + LS+L + + I + S+ + +L Sbjct: 752 DFVLLIEDLGSD-SVAAAARLEQQADQWLSRLREPIEIGGIPRSITVSMGLSLFGEPELT 810 Query: 65 KKLNVKSDLTLWRDVFLRFKAYLQPKNIICDNFNSSVLPVVSSK---------GESMAHY 115 + + R ++A Q +N+ C F+ + + + G + Sbjct: 811 GEEVQR------RAEMAMYQAKSQGRNVSC-FFDPQLQSALQERRTLEQDMRAGLQAGEF 863 Query: 116 NIYYQPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINKLFS 175 ++YQP G + G + + K+ + F + I + L + + Sbjct: 864 ELFYQPQVEM--GKVIGAEGLLRWKHPEKG-FVPPAHFIPLAEETGVILPLGDWVLQAAC 920 Query: 176 PIKNNLPHG-----FFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELY 230 +++N++P+ + L + G + RL L+ + + Sbjct: 921 QQLAKWAKHPRYAQLVLSVNVSPKQFHQSGFVEQVLKALAEHGADARRLKLELTEGMLVS 980 Query: 231 IIRRYQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDI 290 + + + R+++ + SL+DFG GY+ LS+L+ +P + + ++ D+ ++ Sbjct: 981 DVDDTIAKMMRLKSYGIGFSLDDFGTGYSSLSYLKRLPLDQLKIDRSFVRDVLTDPNDAA 1040 Query: 291 IATTIIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRK 345 IA TI+ L+K L + VIA+G+ET+ Q ++ +G +S P+P F Sbjct: 1041 IARTIVALAKSLSLHVIAEGVETQAQCRFLEGIRCYAWQGYLMSPPVPVSEFESL 1095 >UniRef50_Q21SZ9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Proteobacteria RepID=Q21SZ9_RHOFD Length = 1169 Score = 336 bits (863), Expect = 6e-91, Method: Composition-based stats. Identities = 64/341 (18%), Positives = 135/341 (39%), Gaps = 20/341 (5%) Query: 18 NIEFPCLLSEI-EIELLSQLLKGYSVNEISKRRNRSIK-TVSCQKMKLYKKLNVKSDLTL 75 ++E +E +L+ L + YS++ + SI T+ ++ + + L ++DL + Sbjct: 832 HLEAAATQAETLAKRILASLKQTYSLDGYEYQSTASIGITLFSEQQETTEDLLKRADLAM 891 Query: 76 W------RDVFLRFKAYLQPKNIICDNFNSSVLPVVSSKGESMAHYNIYYQPIYNAKNGN 129 + R+ F +Q + + L + + + +YYQ + + G+ Sbjct: 892 YQAKAVGRNTLRFFDPEMQ-----AVVTSRAALEAGLRRAVTSDEFLLYYQAQVDGQ-GH 945 Query: 130 IAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINKLFSPIKNNLP-----HG 184 + GC+ + ++ + A + I + + L + Sbjct: 946 LTGCEALLRWQHPERGLVAP-GEFIALAEDTGLILPLGRWVLDAACTQLAQWATRPEMAH 1004 Query: 185 FFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSLRRIRN 244 + +N++ D + L + GT RL L+ + + + + + ++ Sbjct: 1005 LTVAVNVSVRQFHQADFVNQVLTVLDSTGTNPQRLKLELTESLLIGDVEDVIAKMSILKE 1064 Query: 245 NNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSKQLHI 304 V SL+DFG GY+ LS+L+ +P + + + +I + IA +I L L + Sbjct: 1065 KGVGFSLDDFGTGYSSLSYLKRLPLDQLKIDQGFVRNILIDPNDAAIARMVIALGDSLGL 1124 Query: 305 DVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRK 345 VIA+G+E + Q ++ G +G PLP D F Sbjct: 1125 AVIAEGVEIEAQRDFLARLGCHACQGYLFCRPLPLDQFEAF 1165 >UniRef50_Q5P713 Predicted phospholipase A2 n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5P713_AZOSE Length = 1043 Score = 336 bits (863), Expect = 6e-91, Method: Composition-based stats. Identities = 52/343 (15%), Positives = 130/343 (37%), Gaps = 19/343 (5%) Query: 18 NIEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIKT-VSCQKMKLYKKLNVKSDLTLW 76 + + C + + +L+ + + SI + + ++ L ++D Sbjct: 700 HAQVECA-AHVAEKLIVAAADPMLIEDHEMLVTPSIGIAMYPADGEDFETLLQRADTATN 758 Query: 77 RDV------FLRFKAYLQPKNIICDNFNSSVLPVVSSKGESMAHYNIYYQPIYNAKN-GN 129 R + F +Q ++ ++ L + ++YQP + + G Sbjct: 759 RAKSDGRNTYRFFAPEMQLRSA-----HTLRLETALRRALERNELVLHYQPQIDLVDFGR 813 Query: 130 IAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINK-LFSPIKNNLPHGFF-- 186 +AG + I ++ + + ++ I + + + + + +K G Sbjct: 814 VAGVEALIRWQHPEFGLVSP-AEFIPIAESTGLILPIGEWVMQTALLQLKAWQLAGLQLG 872 Query: 187 -ITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSLRRIRNN 245 + +N++ ++ + G L L+ + + + + + + Sbjct: 873 QVGVNLSAHQFRQQNLPATVARILAEAGLPASCLELELTESAMMDDPVAAVAMMDALHRD 932 Query: 246 NVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSKQLHID 305 V +S++DFG GY+ L++L+ + + ++ D+ + + I I+ L++ L Sbjct: 933 GVRMSIDDFGTGYSSLNYLKRFRIDKLKIDQSFVRDLTQDPEGEAIVEAIVSLARTLRFR 992 Query: 306 VIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLLA 348 IA+G+E +Q ++ G + ++G S PLP D L A Sbjct: 993 TIAEGVEKPEQLAFLRASGCQEVQGYLFSRPLPPDELAVWLRA 1035 >UniRef50_B3PKJ2 EAL domain protein n=1 Tax=Cellvibrio japonicus Ueda107 RepID=B3PKJ2_CELJU Length = 798 Score = 336 bits (863), Expect = 7e-91, Method: Composition-based stats. Identities = 57/342 (16%), Positives = 138/342 (40%), Gaps = 17/342 (4%) Query: 23 CLLSEIEIELLSQLLKGYSVNEISKRRNRSIKT-VSCQKMKLYKKLNVKSDLTLW----- 76 L+++ I+L QL Y+V+ IS SI V + L +D ++ Sbjct: 453 GNLADLTIKLREQLQLPYTVDGISLHITPSIGIAVYPDDGEDPNTLIKNADAAMYLAKEK 512 Query: 77 -RDVFLRFKAYLQPKNIICDNFNSSVLPVVSSKGESMAHYNIYYQPIYNAKNGNIAGCDV 135 R+ + + L K + L + ++YQP +G + G + Sbjct: 513 GRNNYQFYTPTLNAK-----TLDRLKLESDLRSAIDAGDFELHYQPQIIGSSGQLWGLEA 567 Query: 136 TIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHIN----KLFSPIKNNLPHGFFITINI 191 I ++ + + ++ I + L + K + + + +++NI Sbjct: 568 LIRWRHRERGLISP-AEFIPLAEETGLIVGLGDWVLVQAVKQLAEWRRQGHNHLVVSVNI 626 Query: 192 NPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSLRRIRNNNVYLSL 251 + D H ++ + L+ + + ++ +L+ +R +++ Sbjct: 627 SALQFRQGDFLDRVKHILQEAQLVPDAIELELTETMLMQDVQSAIQTLKGLRELGFRIAI 686 Query: 252 NDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSKQLHIDVIADGI 311 +DFG G++ L++L+++P + + + ++ ++ + I +II L++ L + IA+G+ Sbjct: 687 DDFGTGFSSLNYLRHLPINVLKIDQSFVREMLQEPESLAIVESIIALAQALGKETIAEGV 746 Query: 312 ETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLLASLKQV 353 ET+ + + RG + ++G + P+P F + + Sbjct: 747 ETRAEFDVLQARGCRLMQGYFFARPMPPVIFDQWYQQQTQST 788 >UniRef50_Q0F127 Putative uncharacterized protein n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0F127_9PROT Length = 529 Score = 336 bits (863), Expect = 7e-91, Method: Composition-based stats. Identities = 65/342 (19%), Positives = 136/342 (39%), Gaps = 17/342 (4%) Query: 19 IEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIKT-VSCQKMKLYKKLNVKSDLTLWR 77 + P + + ++L+ L G+ ++ S + + L ++ +++ Sbjct: 190 LAHPEDATIVTLKLMQALESGFCIDNHEVVMTISTGIAIFPGDGDDSEALLQSAEQSMYS 249 Query: 78 ------DVFLRFKAYLQPKNIICDNFNSSVLPVVSSKGESMAHYNIYYQPIYNAKNGNIA 131 + + FKA Q I N S + K + ++YQP NA +G++ Sbjct: 250 VKADGGNNYQFFKASTQSSAINRLNMESEM-----RKAIERGEFVLHYQPQINATSGHVV 304 Query: 132 GCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHI----NKLFSPIKNNLPHGFFI 187 G + I ++ + I+ + + + + + + Sbjct: 305 GMEALIRWQHPERGMI-PPYHFISVAEETGMIVPIGEWVMYEACRQNKAWHDAGLAELKV 363 Query: 188 TININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSLRRIRNNNV 247 +N++ + + H +K G L L+ + + I + L I + + Sbjct: 364 AVNLSARQFSDRKLLDKVRHALKQSGLNPAFLELEITESVIMKDIEATIALLEEIASMGL 423 Query: 248 YLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSKQLHIDVI 307 L+++DFG GY+ L++L+ P + + K+ D+ S+ I II LS L ++VI Sbjct: 424 SLAIDDFGTGYSSLNYLKRFPIDKLKIDKSFIDDVISSEDDGKIVEAIIGLSHNLKLNVI 483 Query: 308 ADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLLAS 349 +G+E +Q ++ ER ++G S PLPAD F + + Sbjct: 484 CEGVEDAEQFAWLQERQCNEIQGYYFSKPLPADEFEAFVRSR 525 >UniRef50_Q2W807 Predicted signal transduction protein n=4 Tax=Magnetospirillum RepID=Q2W807_MAGSA Length = 880 Score = 336 bits (863), Expect = 7e-91, Method: Composition-based stats. Identities = 66/357 (18%), Positives = 149/357 (41%), Gaps = 18/357 (5%) Query: 5 KIKLNLIDYDSIVNIEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIKT-VSCQKMKL 63 + + L + D ++E L+E I + Q + V++ SI V + Sbjct: 524 EFTVLLPELD---HLEDVAKLAERVIAHVKQ---PFLVDDNELYVTTSIGIAVYPEDGTT 577 Query: 64 YKKLNVKSDLTLWRDVFLRFKAY-LQPKNIICDNFNSSVLPVVSSKGESMAHYNIYYQPI 122 + L +D ++R L +Y L + +F + + + + YQ Sbjct: 578 VEALIKNADTAMYRAKDLGRNSYQLYTAAMNARSFERLTMESSLRHALTREEFRLVYQVK 637 Query: 123 YNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINK-LFSPIKNNL 181 ++++G ++G + + + + + D I +S + + + K+ + Sbjct: 638 VDSEDGRMSGVEALVRWHHPEMGLVSP-VDFIPLAEAMGVISDIGEWVLRTACRQCKHWM 696 Query: 182 PHGF---FITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSS 238 G I +N++ + + D+ ++ G L L+ + + + + Sbjct: 697 DLGLPPVRIAVNVSAQQFVETDVPEVVARALRETGLPPQYLELELTETVLMQRVDEVVAV 756 Query: 239 LRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESN-----SLTDIIAT 293 L+ +R V +S++DFG GY+ LS+L+ +P + + ++ +DI I + Sbjct: 757 LKSLRAMGVRISIDDFGTGYSSLSYLKRMPIDALKVDRSFVNDIFDGQSKVTEDGAEIVS 816 Query: 294 TIIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLLASL 350 TII+L+ L + IA+G+ET +QA ++ +G ++G +S P+ + + +L Sbjct: 817 TIINLAHNLKLKAIAEGVETPEQAEFLRSKGCDEVQGYLISRPVSGEDLISLFDRNL 873 >UniRef50_Q47FQ3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Proteobacteria RepID=Q47FQ3_DECAR Length = 1093 Score = 336 bits (862), Expect = 8e-91, Method: Composition-based stats. Identities = 54/322 (16%), Positives = 127/322 (39%), Gaps = 11/322 (3%) Query: 27 EIEIELLSQLLKGYSVNEISKRRNRSIKT-VSCQKMKLYKKLNVKSDLTLWRDVFLRFKA 85 ++ ++L L ++ SI L +D +++ Sbjct: 765 KLASKILDALRPPIRIDGHELFVTPSIGICFYPNDGVTVNALMRNADTAMYQAKANGRNT 824 Query: 86 Y---LQPKNIICDNFNSSVLPVVSSKGESMAHYNIYYQPIYNAKNGNIAGCDVTIALKNS 142 Y N DN+ + + + ++YQP+ + K I + + ++ Sbjct: 825 YCYFTAEMNAAADNYF--QIESDLRRAVDRNEFEVFYQPVIDLKTHRITSYEALVRWRHP 882 Query: 143 DGSAFALDSDRINYNPNDNKVSYLFGHINKL-FSPIKNNLPHGFF---ITININPEDILT 198 + I + + + + S +++ + GF + +N++P Sbjct: 883 TKGLVGP-AQFITVAEESGLIGEIGTIVLRQACSQLRSWIDEGFTSPILALNLSPIQFND 941 Query: 199 CDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSLRRIRNNNVYLSLNDFGMGY 258 ++ ++ + R+ L+ + + +L+ + + LS++DFG GY Sbjct: 942 PNLTEGICRILRDYDLTPDRIELEITETVIMQDGELALGTLQNLSSRGFRLSIDDFGTGY 1001 Query: 259 AELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSKQLHIDVIADGIETKKQAG 318 + L++L+ P + + ++ D+ +N I T I+ L+ LH+ VIA+G+ETK+Q Sbjct: 1002 SSLAYLKRFPVDTLKIDRSFITDMTANENDRAIVTAIMALANSLHLSVIAEGVETKEQYD 1061 Query: 319 YMIERGVKYLKGIALSSPLPAD 340 + + +G ++ P+PA+ Sbjct: 1062 LLSALNCNFAQGYYMAKPMPAE 1083 >UniRef50_A6VW49 Diguanylate cyclase/phosphodiesterase n=2 Tax=Marinomonas RepID=A6VW49_MARMS Length = 659 Score = 336 bits (862), Expect = 8e-91, Method: Composition-based stats. Identities = 62/330 (18%), Positives = 126/330 (38%), Gaps = 7/330 (2%) Query: 25 LSEIEIELLSQLLKGYSVNEISKRRNRSIKTVS-CQKMKLYKKLNVKSDLTLWRDVFLRF 83 L I ++ Y V ++ SI S Q L +D ++R Sbjct: 326 LESIAQSIMQNASNTYPVAKMEMMITASIGIASYPQHADDVDNLLKNADAAMYRAKSTGH 385 Query: 84 KAYLQPKNIICDNFN-SSVLPVVSSKGESMAHYNIYYQPIYNAKNGNIAGCDVTIALKNS 142 Y ++ + DN N L K + ++YQP + + G + I + Sbjct: 386 NMYCVYEDHMADNINAHLTLGGGLRKAIEEEQFILHYQPKIRLPDEIVVGAEALIRWVHP 445 Query: 143 DGSAFALDSDRINYNPNDNKVSYLFGHI----NKLFSPIKNNLPHGFFITININPEDILT 198 + + D I + L + + + +++N++ + Sbjct: 446 ELGMISPD-QFIPLAEESGLILPLGEWVIRRACRQLQEWREAGLDPIKLSVNLSSRQFMQ 504 Query: 199 CDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSLRRIRNNNVYLSLNDFGMGY 258 D+ ++ G + L L+ + + ++ L R + LS++DFG GY Sbjct: 505 ADLVDMVQRALEETGVDPEYLELELTESMLMADAQQSIEKLHSFRKLGLTLSIDDFGTGY 564 Query: 259 AELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSKQLHIDVIADGIETKKQAG 318 + L++L+ P + + ++ HD+ + D I I ++ L++ VIA+G+E + Q Sbjct: 565 SSLAYLKKFPIQTLKIDRSFIHDLGLDCDNDAIVKATIAMANSLNLKVIAEGVENRSQVD 624 Query: 319 YMIERGVKYLKGIALSSPLPADAFVRKLLA 348 + + ++G S PL +D F+ L A Sbjct: 625 VLNGYDCQEVQGYLFSKPLSSDDFLMYLKA 654 >UniRef50_B3PHS3 Sensory box/GGDEF family protein n=1 Tax=Cellvibrio japonicus Ueda107 RepID=B3PHS3_CELJU Length = 856 Score = 336 bits (862), Expect = 9e-91, Method: Composition-based stats. Identities = 65/327 (19%), Positives = 139/327 (42%), Gaps = 19/327 (5%) Query: 30 IELLSQLLKGYSVNEISKRRNRSIKT-VSCQKMKLYKKLNVKSDLTLW------RDVFLR 82 ++L L + Y ++E + SI + + L ++D ++ R+ Sbjct: 537 EKILQSLNQVYVLDEQEYFNSPSIGICLFGDDDADIEDLLKRADQAMYHAKAAGRNTLRF 596 Query: 83 FKAYLQPKNIICDNFNSSVLPVVSSKGESMAHYNIYYQPIYNAKNGNIAGCDVTIALKNS 142 F ++Q L + + +YYQP + + G I G + I + Sbjct: 597 FDPHMQASAA-----QRFALQNEIREALLFNQFKLYYQPQVD-RTGRITGAEALIRWLHP 650 Query: 143 DGSAFALDSDRINYNPNDNKVSYLFGHIN-----KLFSPIKNNLPHGFFITININPEDIL 197 + + D I + L I +L +N L ++IN++ Sbjct: 651 ERGMISP-MDFIPIAEESGLILPLGNWILDAACQQLIHWKQNPLTAALTLSINVSARQFQ 709 Query: 198 TCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSLRRIRNNNVYLSLNDFGMG 257 D + L + G +L L+ + + + + ++++ + SL+DFG G Sbjct: 710 QPDFVTQVLAAVTRTGANPHQLTLELTESILATNQQDIITKMDALKSHGIKFSLDDFGTG 769 Query: 258 YAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSKQLHIDVIADGIETKKQA 317 Y+ LS+L+ +P + + + K+ +DI ++ IA +I L++ + ++VIA+G+ET++Q Sbjct: 770 YSSLSYLKRLPINELKIDKSFVNDILTDPNDAAIARMVIRLAQSMELNVIAEGVETQRQR 829 Query: 318 GYMIERGVKYLKGIALSSPLPADAFVR 344 ++ + G + +G P+ A+ F+R Sbjct: 830 DWLEQEGCLHYQGYYFGKPVGAEEFLR 856 >UniRef50_Q1H2G8 Diguanylate cyclase/phosphodiesterase n=1 Tax=Methylobacillus flagellatus KT RepID=Q1H2G8_METFK Length = 633 Score = 336 bits (862), Expect = 9e-91, Method: Composition-based stats. Identities = 53/335 (15%), Positives = 129/335 (38%), Gaps = 16/335 (4%) Query: 25 LSEIEIELLSQLLKGYSVNEISKRRNRSIK-TVSCQKMKLYKKLNVKSDLTLW------R 77 + + + L +N+ + SI ++ + L +D ++ + Sbjct: 293 VEAVANRFIRALAPPIVLNDRNFYIGVSIGASIYPYDGEDAAHLLRDADAAMYYAKSRGK 352 Query: 78 DVFLRFKAYLQPKNIICDNFNSSVLPVVSSKGESMAHYNIYYQPIYNAKNGNIAGCDVTI 137 + F F A + K+ +L + +YYQP ++ + + G + I Sbjct: 353 NNFQMFSAEMHHKSS-----TRLLLETELRVALEEKQFELYYQPQFSLPDCKLVGVEALI 407 Query: 138 ALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINKLFSPIKNNLPH---GFFITININPE 194 + S I + + + + +++N++ Sbjct: 408 RWHHPQRGLL-CPSSFIPVAEETGLIVRIGEWVLREACRQAMEWKALGVPLRMSVNLSGR 466 Query: 195 DILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSLRRIRNNNVYLSLNDF 254 ++ + I+ G + L L+ + + + L ++ ++L+++DF Sbjct: 467 QFRQENLVQTMTKIIERTGMDSSLLELEITETVLMEDAEATTTRLADLKAMGMHLAIDDF 526 Query: 255 GMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSKQLHIDVIADGIETK 314 G GY+ +++L+ P S + + ++ DI ++ I T I ++ L ++V+A+G+ETK Sbjct: 527 GTGYSSMAYLKRFPVSRLKIDRSFIRDIPNDPDDVAITTATIQMAHSLKLEVVAEGVETK 586 Query: 315 KQAGYMIERGVKYLKGIALSSPLPADAFVRKLLAS 349 Q ++ E+G ++G S P+ A ++ Sbjct: 587 AQLQFLREQGSDMVQGYLFSRPVSAREMAELVITG 621 >UniRef50_Q8DL70 Tll0627 protein n=2 Tax=Chroococcales RepID=Q8DL70_THEEB Length = 845 Score = 335 bits (861), Expect = 9e-91, Method: Composition-based stats. Identities = 57/337 (16%), Positives = 122/337 (36%), Gaps = 9/337 (2%) Query: 18 NIEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIKTVSC-QKMKLYKKLNVKSDLTLW 76 ++ P ++ +L L + + + SI + + + L +D ++ Sbjct: 485 DLSDPAQAMKVAERILMVLGRPFLLEGHEIFTTASIGIAFPWEDSQTAEDLLRDADTAMY 544 Query: 77 RDVFLRFKAYLQ-PKNIICDNFNSSVLPVVSSKGESMAHYNIYYQPIYNAKNGNIAGCDV 135 R L Y + + + + +YYQPI + + G + Sbjct: 545 RAKSLGKARYEVFSMTMRAQTIALMQMETELRRAAEREEFLVYYQPIVDLATLKMVGFET 604 Query: 136 TIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHI----NKLFSPIKNNLPHG--FFITI 189 + ++ + + + + + + + + P I + Sbjct: 605 LLRWQHPERGIISP-GEFMAVAEETGLILPISWWVMAEACRQMQRWAVIFPRSRKLRIGV 663 Query: 190 NINPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSLRRIRNNNVYL 249 N++ D+ + G RL L+ + + ++L IR + + Sbjct: 664 NLSGRHFQQADLLPNLRSILAETGFPAQRLCLEVTEGILIDNKEVAIATLEEIRAMGIGV 723 Query: 250 SLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSKQLHIDVIAD 309 S++DFG GY+ LS+L P + + +T + S + I I+ L+ L + V+A+ Sbjct: 724 SMDDFGTGYSSLSYLHRFPIDTLKIDRTFISALNSEESSATIVHAILMLAHSLRLQVVAE 783 Query: 310 GIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKL 346 GIET++Q + G Y +G + PL A + L Sbjct: 784 GIETREQYRALQALGCNYGQGYFFARPLSARQVEKLL 820 >UniRef50_D0IUW1 Diguanylate cyclase/phosphodiesterase with n=3 Tax=Comamonadaceae RepID=D0IUW1_COMTE Length = 900 Score = 335 bits (861), Expect = 1e-90, Method: Composition-based stats. Identities = 63/308 (20%), Positives = 123/308 (39%), Gaps = 13/308 (4%) Query: 51 RSIKTVSCQKMKLYKKLNVKSDLTLWRDVFLRFKAYLQPKNIIC---DNFNSSV-----L 102 S+ + LY + +D L + A + N C +N + L Sbjct: 578 LSVVVSVSAGICLYPDHALTADDLLQGAHAAVYGAKARGSNAWCFFHENMTQAARERLAL 637 Query: 103 PVVSSKGESMAHYNIYYQPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNK 162 + + H +YYQP G + G + + + + + + I N Sbjct: 638 EARLRRALELGHMRLYYQPQIELATGRLVGAEALLRWLDPEEGLISP-ARFIPVAENSGV 696 Query: 163 VS----YLFGHINKLFSPIKNNLPHGFFITININPEDILTCDIERECLHFIKVFGTERIR 218 + ++ G + + I +N++ L DI + G Sbjct: 697 IGPLGLWVLGEACRQGQQWRAAGLPDLAIAVNVSLHQFLLTDIAGATAEALNKSGFPASL 756 Query: 219 LVLQFSTKEELYIIRRYQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTM 278 L L+ + + L R+R + L+++DFG GY+ L+HL+ P + + + Sbjct: 757 LELEITESALAEKPEEALAVLNRLRELGLRLAIDDFGTGYSSLAHLKRFPLDLLKIDQGF 816 Query: 279 FHDIESNSLTDIIATTIIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLP 338 DI ++ I++++I L + + V+A+G+ET++Q ++ ++G Y +G S PLP Sbjct: 817 IRDIPHSADDMTISSSVIALGHAMGLKVLAEGVETQEQLSFLQQKGCDYFQGYFCSRPLP 876 Query: 339 ADAFVRKL 346 A+ F R L Sbjct: 877 AEDFTRLL 884 >UniRef50_Q4KBF3 Response regulator/GGDEF domain/EAL domain protein n=3 Tax=Pseudomonas fluorescens RepID=Q4KBF3_PSEF5 Length = 641 Score = 335 bits (861), Expect = 1e-90, Method: Composition-based stats. Identities = 59/353 (16%), Positives = 146/353 (41%), Gaps = 18/353 (5%) Query: 6 IKLNLIDYDSIVN-IEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIKT-VSCQKMKL 63 + ++ +++ + P + + +LL+ + + + + S+ + + + Sbjct: 281 FRYGSDEFVVVLHDQQHPAQIRALAQKLLATVSQFDDIAGHDLQVTASLGISLYPEDGQD 340 Query: 64 YKKLNVKSDLTLWR------DVFLRFKAYLQPKNIICDNFNSSVLPVVSSKGESMAHYNI 117 L K+++ + + F + + S +L +++ Sbjct: 341 ALALIKKAEMAMRTSKEQAPGSYCFFTDDMTHRAREQQYLESGILQ-----ALERREFHL 395 Query: 118 YYQPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKV----SYLFGHINKL 173 +YQP + +GN+ G + I + + + I + + ++ G + Sbjct: 396 HYQPKIHLASGNVVGAEALIRWQRPQQGWISPEL-FIPVAEDSGLITRISQWVLGEATRQ 454 Query: 174 FSPIKNNLPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIR 233 +N ++IN++ D + ++ + + L L+ + L + Sbjct: 455 CRAWQNAGLPPVPLSINLSAADFRQPQLLQQLRDALSDNALDPAWLELEITEGVLLQNVE 514 Query: 234 RYQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIAT 293 ++L I+ V L+++DFG GY+ LS+L+ P + + ++ H + ++ + Sbjct: 515 VTLATLLAIKALGVRLAVDDFGTGYSSLSYLRKFPVDVLKIDQSFIHGLSHEHKDAVLVS 574 Query: 294 TIIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKL 346 II+L + L++ VIA+G+ET +Q ++ ++G + +G S LPA+ F R L Sbjct: 575 AIINLGRSLNLKVIAEGVETHQQLTFLQQQGCEEAQGYYFSKALPAEDFARLL 627 >UniRef50_B9Z192 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z192_9NEIS Length = 943 Score = 335 bits (861), Expect = 1e-90, Method: Composition-based stats. Identities = 60/340 (17%), Positives = 131/340 (38%), Gaps = 17/340 (5%) Query: 22 PCLLSEIEIELLSQLLKGYSVNEISKRRNRSIK-TVSCQKMKLYKKLNVKSDLTLW---- 76 P + + L + S SI +V + ++ L +D ++ Sbjct: 600 PGSAALAAERIREVLEPPVELFNHSISITPSIGISVFPDDGRDFETLVRNADAAMYHAKS 659 Query: 77 --RDVFLRFKAYLQPKNIICDNFNSSVLPVVSSKGESMAHYNIYYQPIYNAKNGNIAGCD 134 R+ + + A L + + + ++YQP + K G I G + Sbjct: 660 AGRNSYKFYTADLNARAREILE-----IESQLRYALDRDEFVLHYQPQVDLKTGEIIGAE 714 Query: 135 VTIALKNSDGSAFALDSDRINYNPNDNKV----SYLFGHINKLFSPIKNNLPHGFFITIN 190 I ++ + I + +++ + + + + +N Sbjct: 715 ALIRWQHPELGLLGP-VRFIEVAEERGFIVQIGNWVIQEACRQLAQWRRQGLPRISLAVN 773 Query: 191 INPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSLRRIRNNNVYLS 250 ++ D+ + G L ++ + + + ++ RI++ + LS Sbjct: 774 LSTLQFRQQDLAVHLQRALSAHGLVGSDLDVEVTESVIMDDVETTIHTIDRIKSMGLQLS 833 Query: 251 LNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSKQLHIDVIADG 310 ++DFG GY+ LS+L+ + + ++ DI ++ IA II+++K L++ VIA+G Sbjct: 834 IDDFGTGYSSLSYLKRFKADKLKIDRSFVRDIPMDADDSAIARAIINMAKNLNMTVIAEG 893 Query: 311 IETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLLASL 350 +ET +Q ++ G +G L+ P+PA F R L + Sbjct: 894 VETIEQWKFLDREGCHAAQGYLLAKPVPAKEFERLLEKGV 933 >UniRef50_A1KAZ1 Hypothetical signaling protein n=1 Tax=Azoarcus sp. BH72 RepID=A1KAZ1_AZOSB Length = 952 Score = 335 bits (861), Expect = 1e-90, Method: Composition-based stats. Identities = 65/338 (19%), Positives = 135/338 (39%), Gaps = 10/338 (2%) Query: 18 NIEFPCLLSEIEIELLSQLLKGYSV---NEISKRRNRSIKTVSCQKMKLYKKLNVKSDLT 74 ++E P + + L+ L +++ +E+ R + I + + L +D Sbjct: 614 HVEAPADAAVVAKNLVEVLAAPFALSNGHEVFIRASIGI-SFYPDDGDDFMTLVRNADAA 672 Query: 75 LWRDVFLRFKAY-LQPKNIICDNFNSSVLPVVSSKGESMAHYNIYYQPIYNAKNGNIAGC 133 ++R Y +++I L + + +YYQP+ K+G + G Sbjct: 673 MYRAKAQGRNTYGFYTEDLIRSATERLALETRLRRALEHDEFVVYYQPVLGVKDGRLLGA 732 Query: 134 DVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINK-LFSPIKNNLPHGF---FITI 189 + + K G + I + L + + ++ + G+ + + Sbjct: 733 EALVRWK-PQGEPMVSPAAFIPVAEETGLIVALGEWVLRDACRQVREWIDAGYAFGQVAV 791 Query: 190 NINPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSLRRIRNNNVYL 249 N++ E D+ + G +L L+ + L L R++ V L Sbjct: 792 NLSAEQFRRQDVSAMLATVLAETGLPATQLELEITESSLLEAGEHAVGLLERLKQQGVGL 851 Query: 250 SLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSKQLHIDVIAD 309 +++DFG GY+ L++L+ + + ++ DI +S IA+ I+ +++ L + V A+ Sbjct: 852 AIDDFGTGYSSLAYLKRFSIDKLKIDRSFVQDIADDSNDLAIASAIVAMARALDMAVQAE 911 Query: 310 GIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLL 347 G+E + Q + G +G S PLPAD F + L Sbjct: 912 GVEGEAQLELLRGLGCGSYQGYLCSPPLPADEFEARFL 949 >UniRef50_Q608F9 Sensory box protein n=1 Tax=Methylococcus capsulatus RepID=Q608F9_METCA Length = 965 Score = 335 bits (861), Expect = 1e-90, Method: Composition-based stats. Identities = 56/321 (17%), Positives = 115/321 (35%), Gaps = 7/321 (2%) Query: 32 LLSQLLKGYSVNEISKRRNRSIK-TVSCQKMKLYKKLNVKSDLTLWRDVFLRFKAYLQPK 90 ++S + K + S+ ++ + L +D ++ L Y Sbjct: 636 MISAIAKPAVAGGRTLIVTPSLGISLYPHDAGDSESLIKSADAAMYHAKSLGRNTYQFFS 695 Query: 91 -NIICDNFNSSVLPVVSSKGESMAHYNIYYQPIYNAKNGNIAGCDVTIALKNSDGSAFAL 149 + L + S + +YYQP + + G + I ++ + Sbjct: 696 AEMSAVATERLALENALHQALSNGEFRLYYQPQIEVCSRRLIGLEALIRWRHPEVGWV-P 754 Query: 150 DSDRINYNPNDNKVSYLFGHINKLFSPIKNNLPHG----FFITININPEDILTCDIEREC 205 I + + + + + + +N++P + D + Sbjct: 755 PLRFIPLAEETGIIHRIGRWVLEEACRQQREWQAAGLCIVPVAVNLSPLQLQKDDFPEQV 814 Query: 206 LHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSLRRIRNNNVYLSLNDFGMGYAELSHLQ 265 + L L+ + + + R LR+++ S++DFG GY+ L +L Sbjct: 815 EALLSGCRLAPGLLELELTETAVMRDVGRMSDMLRKLKERGTRFSIDDFGTGYSSLGYLN 874 Query: 266 NIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSKQLHIDVIADGIETKKQAGYMIERGV 325 P + + ++ D+ I II L+KQLH+ V+A+G+ET +Q ++ G Sbjct: 875 RFPVDKLKIDQSFIRDVTRREDHAAITRAIIALAKQLHLKVVAEGVETAEQLEFLERAGC 934 Query: 326 KYLKGIALSSPLPADAFVRKL 346 +G S P+PAD L Sbjct: 935 DGAQGFYFSRPVPADEIAGWL 955 >UniRef50_A1W8G6 Diguanylate cyclase/phosphodiesterase n=7 Tax=Comamonadaceae RepID=A1W8G6_ACISJ Length = 756 Score = 335 bits (861), Expect = 1e-90, Method: Composition-based stats. Identities = 50/327 (15%), Positives = 124/327 (37%), Gaps = 17/327 (5%) Query: 32 LLSQLLKGYSVNEISKRRNRSIKT-VSCQKMKLYKKLNVKSDLTLWRD------VFLRFK 84 + L+ + S+ + + ++ L +D ++R F F Sbjct: 432 MQEAALQPVHIQHHELSLALSMGIALFPEHGSDFETLIQSADTAMYRAKADGRNSFRFFT 491 Query: 85 AYLQPKNIICDNFNSSVLPVVSSKGESMAHYNIYYQPIYNAKNGNIAGCDVTIALKNSDG 144 +Q ++ + + +++YQP + G + G + + + + Sbjct: 492 PTMQAQSARALQLTN-----ALRRALERNQLSLHYQPQVSIATGRVCGVEALLRWHHPEL 546 Query: 145 SAFALDSDRINYNPNDNKVSYLFGHINK----LFSPIKNNLPHGFFITININPEDILTCD 200 A + ++ I + ++ + + + + + +N++ Sbjct: 547 GAVSP-AEFIPVAEDTGQILPIGEWVLRTALAQLRTWHSQGLPALTMAVNLSAVQFRQPQ 605 Query: 201 IERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSLRRIRNNNVYLSLNDFGMGYAE 260 + + +G + L L+ + + +++ ++ V LS++DFG GY+ Sbjct: 606 LLELVDRLLAEYGVQPHLLELELTENVAVADPHAAIATMDQLHAKGVRLSMDDFGTGYSS 665 Query: 261 LSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSKQLHIDVIADGIETKKQAGYM 320 LSHL+ + + ++ D++ + I + II +++ L + A+G+ET Q ++ Sbjct: 666 LSHLKRFQIYRLKIDQSFVRDLDHDGNDRAIVSAIIRMAQALGMRTTAEGVETAHQLTFL 725 Query: 321 IERGVKYLKGIALSSPLPADAFVRKLL 347 E+G +G S PL A + LL Sbjct: 726 REQGCDEAQGFYFSRPLGAPHLQQYLL 752 >UniRef50_Q0AIX2 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=6 Tax=Proteobacteria RepID=Q0AIX2_NITEC Length = 791 Score = 335 bits (861), Expect = 1e-90, Method: Composition-based stats. Identities = 59/344 (17%), Positives = 138/344 (40%), Gaps = 7/344 (2%) Query: 9 NLIDYDSIVNIEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIKTVSCQKMKLYKKLN 68 L+ + + ++ P +++ I LL+ S +EI + I ++ + +L Sbjct: 443 FLLVLEDVRDLGDPAFVAQSLINLLTSPFVLPSGHEIFINASIGI-SLFPEDASNATELI 501 Query: 69 VKSDLTLWRDVFLRFKAYLQPKNIICDNFNS-SVLPVVSSKGESMAHYNIYYQPIYNAKN 127 SD+ +++ Y + N ++ S ++YQP+ +A+ Sbjct: 502 QHSDMAMYQAKKEGRNTYRYHTEALSVAANERLIMENRLRYALSAEELILHYQPLVDART 561 Query: 128 GNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHI----NKLFSPIKNNLPH 183 G + G + + + G A I + L + K + Sbjct: 562 GYVVGVEALVRWQ-PPGKAMVPPGKFIPIAEETGLIVPLGEWVLRTACKQARAWIDAGLS 620 Query: 184 GFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSLRRIR 243 + +N++ + ++ ++ L L+ + + + + +L +++ Sbjct: 621 PLVMAVNLSVRQFQSENLVGMVQRILEETQLPADYLELELTESMFMEHVEQSIETLNKLK 680 Query: 244 NNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSKQLH 303 V+L+++DFG GY+ L +L+ P + + + D+ + IA TII +++ L Sbjct: 681 TLGVHLAIDDFGTGYSSLIYLKRFPIDKLKIDQRFVRDLADDHNDREIAATIIAMARGLK 740 Query: 304 IDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLL 347 + V+A+GIE+++Q ++ ++ Y +G P+PA L Sbjct: 741 LGVLAEGIESEEQLAFLRQQDCDYYQGYLFHRPVPAIELEAWLR 784 >UniRef50_D1AZY7 Diguanylate cyclase n=1 Tax=Sulfurospirillum deleyianum DSM 6946 RepID=D1AZY7_SULD5 Length = 586 Score = 335 bits (861), Expect = 1e-90, Method: Composition-based stats. Identities = 64/330 (19%), Positives = 132/330 (40%), Gaps = 9/330 (2%) Query: 26 SEIEIELLSQLLKGYSVNEISKRRNRSIKTVSCQK-MKLYKKLNVKSDLTLWRDVFLRFK 84 + + L + Y + + SI K + L ++D+ +++ Sbjct: 259 EKFATRVKYLLNEPYELLGYEHTCSSSIGIALFNGQPKSKETLLKQADIAMYQAKEKGRN 318 Query: 85 AYLQPKNIICDNFNSSV-LPVVSSKGESMAHYNIYYQPIYNAKNGNIAGCDVTIALKNSD 143 ++ +N + S ++YQP N + G I G + + + Sbjct: 319 RICFYDPLMQENIEHKTTMEHELRMALSKEELILFYQPQVNLE-GKIVGVEALLRWNHPQ 377 Query: 144 GSAFALDSDRINYNPNDNKV----SYLFGHINKLFSPIKNNLPH-GFFITININPEDILT 198 + I + S++ + S K + PH ++IN++ + Sbjct: 378 KGLI-PPNTFIPLAEETGLIIPVGSWVLHRACQQLSEWKKDFPHQPLHLSINVSAKQFQE 436 Query: 199 CDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSLRRIRNNNVYLSLNDFGMGY 258 + I + G++ + L+ + L I + + +R V SL+DFG GY Sbjct: 437 ASFYETVANAIALSGSDAGSIKLELTESLILDSIHETIAKIEALRLLGVGFSLDDFGTGY 496 Query: 259 AELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSKQLHIDVIADGIETKKQAG 318 + LS+L+ +P + + ++ DI ++ +I TII+++ +DVIA+G+E K+Q Sbjct: 497 SSLSYLKRLPLDELKIDQSFVRDIGHDNNDAMIVKTIIEMAHNFDLDVIAEGVEDKEQFN 556 Query: 319 YMIERGVKYLKGIALSSPLPADAFVRKLLA 348 +++E G +G P+P + R LA Sbjct: 557 FLMENGCGLFQGYLFGKPMPPEELERLFLA 586 >UniRef50_Q1JXC9 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JXC9_DESAC Length = 888 Score = 335 bits (861), Expect = 1e-90, Method: Composition-based stats. Identities = 64/331 (19%), Positives = 132/331 (39%), Gaps = 17/331 (5%) Query: 28 IEIELLSQLLKGYSVNEISKRRNRSIK-TVSCQKMKLYKKLNVKSDLTLW------RDVF 80 I E+ +L + V SI ++ K L +D ++ RD + Sbjct: 559 IAQEVNRRLAEMMVVEGYKLFLTASIGISLYPGDGKDVVSLLKCADAAMFKAKELGRDNY 618 Query: 81 LRFKAYLQPKNIICDNFNSSVLPVVSSKGESMAHYNIYYQPIYNAKNGNIAGCDVTIALK 140 + A L + L + H +Y+QP + I G + + + Sbjct: 619 RFYTAGLNERASELL-----ALEGALRQAVDKNHLVVYFQPQVELASRRIIGAEALVRWQ 673 Query: 141 NSDGSAFALDSDRINYNPNDNKVSYLFGHINKLFSPIKNNLP----HGFFITININPEDI 196 + + + D I + + + + I++N++ Sbjct: 674 HPENGMISP-VDFIPMAEETGLIVSIGEWVLRQSCLQARQWQVAGYPPMRISVNMSARQF 732 Query: 197 LTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSLRRIRNNNVYLSLNDFGM 256 D+ ++ G L L+ + + + L + + + LS++DFG Sbjct: 733 RQKDLVPMVRRILQETGLSPEYLDLEITESILMNDVDGAVERLVELHSLGIQLSIDDFGT 792 Query: 257 GYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSKQLHIDVIADGIETKKQ 316 GY+ L++L+ P Y+ + ++ D+ + IAT +IDL++ ++++VIA+GIE + Q Sbjct: 793 GYSSLAYLKKFPIQYLKIDRSFVRDVIIDPNDAAIATAVIDLARNMNLNVIAEGIEQQDQ 852 Query: 317 AGYMIERGVKYLKGIALSSPLPADAFVRKLL 347 ++++RG Y +G S P+PA F + L+ Sbjct: 853 HQFLLDRGCGYGQGYLFSRPIPAHEFEQLLV 883 >UniRef50_Q1JZ20 Diguanylate cyclase/phosphodiesterase n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JZ20_DESAC Length = 814 Score = 335 bits (860), Expect = 1e-90, Method: Composition-based stats. Identities = 56/337 (16%), Positives = 130/337 (38%), Gaps = 16/337 (4%) Query: 24 LLSEIEIELLSQLLKGYSVNEISKRRNRSIKT-VSCQKMKLYKKLNVKSDLTLW-----R 77 L + +LL ++ ++ SI + L +DL ++ + Sbjct: 471 SLIPLMQDLLKEISSPCHIDNHHIVVTASIGISLFPNDGNDSITLLRNADLAMYQSKRHK 530 Query: 78 DVFLRFKAYLQPKNIICDNFNSSVLPVVSSKGESMAHYNIYYQPIYNAKNGNIAGCDVTI 137 F + + + + L + ++YQP + ++G I GC+ I Sbjct: 531 GDFTFYSSDMNQHAVKILE-----LEKDLRQALERGELLLHYQPKVSLQSGKIVGCEALI 585 Query: 138 ALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINKLFSPIKNNLP----HGFFITININP 193 ++ + +D I + + + + + + +N++ Sbjct: 586 RWQHPLRGLVSP-ADFIPLAEETGLIVPIGTWVLEQACQQAISWQQQQLPTITMAVNLSS 644 Query: 194 EDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSLRRIRNNNVYLSLND 253 ++ ++ L L+ + + ++ ++ V LSL+D Sbjct: 645 RQFRHGNLCDVVDTILETTTLHPDLLDLEITESMIMDDPEGAVQTMIALKERGVLLSLDD 704 Query: 254 FGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSKQLHIDVIADGIET 313 FG GY+ L++L+ P + + + D+ +S + +A +I+D++ L + +A+G+ET Sbjct: 705 FGTGYSSLNYLRRFPVDCLKIDASFIRDVAQDSSSAAVAVSIVDIAHHLGLTTVAEGVET 764 Query: 314 KKQAGYMIERGVKYLKGIALSSPLPADAFVRKLLASL 350 +Q ++ + L+G S PLPA+ F L ++L Sbjct: 765 VEQLDFLEKCHCDILQGYLYSRPLPAEDFTSLLRSNL 801 >UniRef50_A0L9T5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Proteobacteria RepID=A0L9T5_MAGSM Length = 1275 Score = 335 bits (860), Expect = 1e-90, Method: Composition-based stats. Identities = 60/331 (18%), Positives = 134/331 (40%), Gaps = 11/331 (3%) Query: 25 LSEIEIELLSQLLKGYSVNEISKRRNRSIKTVSCQKM-KLYKKLNVKSDLTLWRDVFL-- 81 ++ I ++ L + + + SI + Y+ L +D ++R Sbjct: 934 VARIAGAIVKSLGEVFVLQGHEVFIGGSIGIAMHPDDGEDYETLTKHADTAMYRAKEEGR 993 Query: 82 -RFKAYLQPKNIICDNFNSSVLPVVSSKGESMAHYNIYYQPIYNAKNGNIAGCDVTIALK 140 +K + N I N L + ++YQP + K I G + + Sbjct: 994 GTYKFFTSDMNEI--NGRRLSLERALRQAVECNQLTLHYQPKVDVKQCRITGMEALVRWN 1051 Query: 141 NSDGSAFALDSDRINYNPNDNKVSYLFGHINKLFS----PIKNNLPHGFFITININPEDI 196 + + + D I + + + + + + H + IN++ + Sbjct: 1052 HPEQGLVSP-VDFIPIAEETGLIITIGEWVMQQACMDAKRLARSSRHPLQVAINLSAKQF 1110 Query: 197 LTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSLRRIRNNNVYLSLNDFGM 256 + + ++ G L ++ + + + R + +R V +S++DFG Sbjct: 1111 QDALLVAKLERSLQQSGLAPELLEVEITESLAMGDVNRTIEQIGELRALGVKVSIDDFGT 1170 Query: 257 GYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSKQLHIDVIADGIETKKQ 316 GY+ LS+L+ +P + + + K+ D+ +S I ++I+ ++ L + V+A+G+E + Q Sbjct: 1171 GYSSLSYLKKLPLNALKIDKSFIQDLYLDSDDTAIVSSILSMASALGLSVVAEGVENQAQ 1230 Query: 317 AGYMIERGVKYLKGIALSSPLPADAFVRKLL 347 ++ E+ ++G S PLP +AF + LL Sbjct: 1231 IHFLCEKECPTIQGYFFSKPLPFEAFEKFLL 1261 >UniRef50_Q2RPL3 Diguanylate cyclase/phosphodiesterase n=1 Tax=Rhodospirillum rubrum ATCC 11170 RepID=Q2RPL3_RHORT Length = 855 Score = 335 bits (860), Expect = 1e-90, Method: Composition-based stats. Identities = 58/333 (17%), Positives = 126/333 (37%), Gaps = 18/333 (5%) Query: 28 IEIELLSQLLKGYSVNEISKRRNRSIKTVSCQK-MKLYKKLNVKSDLTLWRDV------F 80 I ++L L + + + S+ + L +D+ ++ + Sbjct: 512 IAEKILYSLSEPFPIGGTEVFCIPSVGITYFPDHGETAPDLLRNADVAMYHAKQGGERRY 571 Query: 81 LRFKAYLQPKNIICDNFNSSVLPVVSSKGESMAHYNIYYQPIYNAKNGNIAGCDVTIALK 140 F + +++ S + + +++QP A + + G + I + Sbjct: 572 AIFTPDMARRSLALLTMESD-----LRHALARDEFELHFQPKVRA-DLTLIGAEALIRWR 625 Query: 141 NSDGSAFALDSDRINYNPNDNKVSYLFGHINKLFSP-IKNNLPHGFFI---TININPEDI 196 + + D I + + + + + G I ++N++P Sbjct: 626 HPEKGLINP-GDFIPLAEESGLILPIGRWTLREACDRVMSWRAEGLTIPSVSVNVSPRQF 684 Query: 197 LTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSLRRIRNNNVYLSLNDFGM 256 + + G E L L+ + + +LR +++ V LS++DFG Sbjct: 685 QDQTLVETVRQILVETGLEPEALDLEITETVMTGDVEHAVGTLRALKDLGVTLSIDDFGT 744 Query: 257 GYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSKQLHIDVIADGIETKKQ 316 GY+ L++L+ P + + +T D+ + I +TII L++ L V+A+G+E +Q Sbjct: 745 GYSSLNYLKTFPIDTLKIDQTFVRDVLHSGKDAAIVSTIIALARNLGFSVVAEGVEEIEQ 804 Query: 317 AGYMIERGVKYLKGIALSSPLPADAFVRKLLAS 349 A ++ R + +G S PLP F L + Sbjct: 805 AEFLGSRDCQNFQGFLYSRPLPPAEFTTFLRTA 837 >UniRef50_A4U1P1 Sensory box/GGDEF family protein n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4U1P1_9PROT Length = 768 Score = 335 bits (860), Expect = 1e-90, Method: Composition-based stats. Identities = 54/337 (16%), Positives = 122/337 (36%), Gaps = 15/337 (4%) Query: 24 LLSEIEIELLSQLLKGYSVNEISKRRNRSIK-TVSCQKMKLYKKLNVKSDLTLWRDVFLR 82 + E+ L + + + +N + +I T+ L +D+ ++R + Sbjct: 436 SVVELAGSLTKAMRRPFDINGHDVQVGAAIGITLYPDDGADADTLLKNADMAMYRAI--- 492 Query: 83 FKAYLQPKNIICDNFNSSV-----LPVVSSKGESMAHYNIYYQPIYNAKNGNIAGCDVTI 137 + ++ + L K ++YQPI + ++ I + + Sbjct: 493 -EDNPNGYRFFAPTMDAELALRRRLESDLRKAIQRDELELHYQPIVDTQSRRIISFEALL 551 Query: 138 ALKNSDGSAFALDSDRINYNPNDNKVSYLFGHI----NKLFSPIKNNLPHGFFITININP 193 ++D + + I + + + + + + +N++ Sbjct: 552 RWNHADDGWISP-VEFIPMAEGNGMIGPIGEWVLRRACQQMRDWDRMGIPPVPVAVNMSA 610 Query: 194 EDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSLRRIRNNNVYLSLND 253 + D+ + G RL L+ + + Q I V L+++D Sbjct: 611 LQLKRQDVPMLVRKMLTEAGVPSHRLELELTETTVMEDADAAQRIFADIAGLGVRLAVDD 670 Query: 254 FGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSKQLHIDVIADGIET 313 FG GY+ L+ L+ P + + ++ D+ + IA II + + + V+A+G+ET Sbjct: 671 FGTGYSSLARLKRFPVGKLKIDRSFVGDLAEDEGDAAIARAIISMGHAMGLKVVAEGVET 730 Query: 314 KKQAGYMIERGVKYLKGIALSSPLPADAFVRKLLASL 350 +Q + E G ++G S +PAD L + Sbjct: 731 PEQLAILAEAGCDAIQGFLFSRAVPADQAAELLRRGV 767 >UniRef50_B5E7Y8 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=4 Tax=Geobacter RepID=B5E7Y8_GEOBB Length = 704 Score = 335 bits (860), Expect = 1e-90, Method: Composition-based stats. Identities = 60/328 (18%), Positives = 132/328 (40%), Gaps = 7/328 (2%) Query: 25 LSEIEIELLSQLLKGYSVNEISKRRNRSIK-TVSCQKMKLYKKLNVKSDLTLWRDVFLRF 83 +++I +L + YS+ + SI ++ L +D +++ Sbjct: 374 VAKIARRILEAVSVPYSLEGQEVFVSTSIGISLYPFDATTASDLIRNADGAMYQAKEQGR 433 Query: 84 KAYLQ-PKNIICDNFNSSVLPVVSSKGESMAHYNIYYQPIYNAKNGNIAGCDVTIALKNS 142 Y +++ +L K + +YYQP + ++G + G + + + Sbjct: 434 NGYQIYDESMNAKALERIILESQLHKALKEEEFIVYYQPQVSNQSGRVVGIEALVRWNSK 493 Query: 143 DGSAFALDSDRINYNPNDNKVSYLFGHINK-LFSPIKNNLPHGF---FITININPEDILT 198 + + V + + + K L GF + INI+ + + Sbjct: 494 ELG-LVEPGRFLPLAEEIGLVIQIDQWVMREACRQHKLWLDAGFPPVTLAINISGQQFMK 552 Query: 199 CDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSLRRIRNNNVYLSLNDFGMGY 258 ++ +K G + L L+ + + R +L+ ++ V L+++DFG G+ Sbjct: 553 NELLETVTSVLKESGLDPGLLELELTEGVLMAHTERTVKTLQALKGMGVRLAIDDFGTGF 612 Query: 259 AELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSKQLHIDVIADGIETKKQAG 318 + LS+L+ P + + +T +DI ++ I I+++ + + VIA+G+ETK Q Sbjct: 613 SSLSYLKRFPLDVLKIDRTFINDITTDPDDAAITLATIEMAHTMKLKVIAEGVETKPQLD 672 Query: 319 YMIERGVKYLKGIALSSPLPADAFVRKL 346 ++ + G +G S P+P+ R Sbjct: 673 FLTKNGCDMYQGYLFSKPVPSTELPRLF 700 >UniRef50_A1STH5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Psychromonas ingrahamii 37 RepID=A1STH5_PSYIN Length = 962 Score = 335 bits (860), Expect = 2e-90, Method: Composition-based stats. Identities = 55/310 (17%), Positives = 120/310 (38%), Gaps = 11/310 (3%) Query: 43 NEISKRRNRSIKTVSCQKMKLYKKLNVKSDLTLWR---DVFLRFKAYLQPKNIICDNFNS 99 NE++ + I + +K L ++ ++R D F + + Sbjct: 636 NELTITPSIGI-AIYPNDGNDFKTLLKNAETAMYRVKNDSRNGFHFVTPEMQLSAS--RN 692 Query: 100 SVLPVVSSKGESMAHYNIYYQPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPN 159 L +YYQP + NG I G + + + + + ++ I + Sbjct: 693 LQLENALRHALKRNELQLYYQPQISTSNGQIIGAEALLRWHHPELGMISP-AEFIPIAES 751 Query: 160 DNKVSYLFGHINK-LFSPIKNNLPHGFF---ITININPEDILTCDIERECLHFIKVFGTE 215 ++ + + + KN + GF I +N++ ++ + Sbjct: 752 SGQIIEIGEWVLRTAIRQTKNWMDDGFTPMIIAVNLSVVQFRQKNLLTLITDILAEVQLP 811 Query: 216 RIRLVLQFSTKEELYIIRRYQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLH 275 L L+ + ++ + + + +S++DFG GY+ LS+L+ + + Sbjct: 812 NEYLELELTEAVTMHDPESVINVMNTFHEQGIRMSIDDFGTGYSSLSYLKKFKVYKLKID 871 Query: 276 KTMFHDIESNSLTDIIATTIIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSS 335 ++ DI ++ I + IID++ L + IA+G+ET +Q ++ G ++G S Sbjct: 872 QSFIRDISNDPDDRAIVSAIIDMASNLGLQTIAEGVETAEQLAFLRLHGCHEVQGYYFSK 931 Query: 336 PLPADAFVRK 345 PLP+ F + Sbjct: 932 PLPSVEFEQF 941 >UniRef50_Q47GC0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Betaproteobacteria RepID=Q47GC0_DECAR Length = 862 Score = 335 bits (860), Expect = 2e-90, Method: Composition-based stats. Identities = 57/332 (17%), Positives = 134/332 (40%), Gaps = 10/332 (3%) Query: 26 SEIEIELLSQLLKGYSVNEISKRRNRSIKTVSCQKMKL-YKKLNVKSDLTLWRDVFLRFK 84 + ++L+ L + Y + ++ + SI + + L ++DL++++ Sbjct: 499 ETVAEKILATLNQTYQLGHVTHHSSASIGATLFKGPLIPIDDLMKQADLSMYKAKAAGRN 558 Query: 85 AYLQPKNIICDNFN-SSVLPVVSSKGESMAHYNIYYQPIYNAKNGNIAGCDVTIALKNSD 143 A + + + + + + ++YQ + + G +V + ++ Sbjct: 559 AVRFFDPSMEIAVKVRAEMEDDLLRALAEKQFLLHYQAQMVGE--RLTGAEVLLRWQHPQ 616 Query: 144 GSAFALDSDRINYNPNDNKVSYLFGHINKLFSPIKNNLP-----HGFFITININPEDILT 198 + ++ I + L + + + +N++ Sbjct: 617 RGMVSP-AEFIPLAEETGLILPLGHWVLETACTQLAQWAGRPEVAHLTLAVNVSAHQFRQ 675 Query: 199 CDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSLRRIRNNNVYLSLNDFGMGY 258 D + L ++ G RL L+ + + + + +++ V SL+DFG GY Sbjct: 676 NDFVDQVLGVLEKTGANPQRLKLELTESLLVENVEDIIDKMAALKHRGVGFSLDDFGTGY 735 Query: 259 AELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSKQLHIDVIADGIETKKQAG 318 + LS+L+ +P ++ + ++ D+ ++S IA TI+ L+ L + VIA+G+ET+ Q Sbjct: 736 SSLSYLKRLPLDHLKIDQSFVRDVLTDSNDASIARTIVALANSLGLGVIAEGVETEAQRD 795 Query: 319 YMIERGVKYLKGIALSSPLPADAFVRKLLASL 350 ++ G +G S PLP + F L ++ Sbjct: 796 FLASSGCHTYQGYYFSRPLPIEDFESFTLTAI 827 >UniRef50_A6U700 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=4 Tax=Rhizobiaceae RepID=A6U700_SINMW Length = 772 Score = 335 bits (859), Expect = 2e-90, Method: Composition-based stats. Identities = 54/322 (16%), Positives = 126/322 (39%), Gaps = 7/322 (2%) Query: 34 SQLLKGYSVNEISKRRNRSIKTVS-CQKMKLYKKLNVKSDLTLWRDVFLRFKAYLQP-KN 91 S + + S + + S+ + + +L +D+ ++R L + Sbjct: 450 SAIAMPLQLQGRSLQVSCSMGVACFPNQGRTAGELLANADMAMYRAKELGRDNIQVFTEE 509 Query: 92 IICDNFNSSVLPVVSSKGESMAHYNIYYQPIYNAKNGNIAGCDVTIALKNSDGSAFALDS 151 + + + + +++QP N G I + + + + S Sbjct: 510 MAARAHERLQWQEELREALAGEEFLLHFQPQMNLGTGRIFAAEALLRWNHPVRGIISP-S 568 Query: 152 DRINYNPNDNKVSYLFGHI----NKLFSPIKNNLPHGFFITININPEDILTCDIERECLH 207 I + + + ++ I++N++ + Sbjct: 569 VFIPLAEETGLIVPIGDWALRAACRQLKAWQDAGLPPLIISVNVSARQFRERNWASRVAE 628 Query: 208 FIKVFGTERIRLVLQFSTKEELYIIRRYQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNI 267 +K G E L L+ + + + +++ + V+L+++DFG GY+ LS L+ Sbjct: 629 ILKETGLEARYLELELTESLIMQDVPGAIATMHALEAIGVHLAIDDFGTGYSSLSALKRF 688 Query: 268 PFSYVNLHKTMFHDIESNSLTDIIATTIIDLSKQLHIDVIADGIETKKQAGYMIERGVKY 327 P + + ++ DI ++ I + II L+++L + VIA+G+E++ Q ++ + G Sbjct: 689 PVRRLKIDRSFVTDIPLDADDMAITSAIISLAQKLGLRVIAEGVESEAQVEFLQKAGCDE 748 Query: 328 LKGIALSSPLPADAFVRKLLAS 349 ++G S PL A+AF L ++ Sbjct: 749 IQGYFFSRPLSAEAFESLLSSA 770 >UniRef50_Q3SIW6 Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) n=2 Tax=Proteobacteria RepID=Q3SIW6_THIDA Length = 1212 Score = 335 bits (859), Expect = 2e-90, Method: Composition-based stats. Identities = 58/320 (18%), Positives = 126/320 (39%), Gaps = 17/320 (5%) Query: 32 LLSQLLKGYSVNEISKRRNRSIK-TVSCQKMKLYKKLNVKSDLTLW------RDVFLRFK 84 LL L+ Y + + SI ++ L +D ++ RD F Sbjct: 887 LLGALVPRYRIGGHALHTTASIGISLYPHDGDDADALMKNADTAMYHAKSQGRDNVQFFT 946 Query: 85 AYLQPKNIICDNFNSSVLPVVSSKGESMAHYNIYYQPIYNAKNGNIAGCDVTIALKNSDG 144 + + F+ + ++YQP N+ +G + + + ++ Sbjct: 947 PEMNQSVLKRLQFDHD-----LRVAVEAGQFELHYQPQINSTSGRVVKVEALVRWQHPRE 1001 Query: 145 SAFALDSDRINYNPNDNKVSYLFGHI----NKLFSPIKNNLPHGFFITININPEDILTCD 200 + ++ I + L + + ++ + +N++ + + Sbjct: 1002 GLVSP-AEFIPIAEETGLILPLGEWVLNEACRQLRLWRDAGITDLTVAVNLSAHQLHSPA 1060 Query: 201 IERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSLRRIRNNNVYLSLNDFGMGYAE 260 + + G E L L+ + + + L+ +R+ ++LS++DFG GY+ Sbjct: 1061 LIPMVARTLGNHGLEGADLCLEITESVAMRDTTASIAQLQALRDLGIHLSIDDFGTGYSS 1120 Query: 261 LSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSKQLHIDVIADGIETKKQAGYM 320 LS+L+ +P + L ++ +IE N I I L+ L ++V+A+GIET+ Q + Sbjct: 1121 LSYLKLLPIDTLKLDQSFVCEIEFNPSDVAICAATIALAHSLGLEVVAEGIETETQRRLL 1180 Query: 321 IERGVKYLKGIALSSPLPAD 340 +++G S+PLPA+ Sbjct: 1181 ASHRCDFMQGYLFSAPLPAE 1200 >UniRef50_B1XZA8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=5 Tax=Bacteria RepID=B1XZA8_LEPCP Length = 1147 Score = 335 bits (859), Expect = 2e-90, Method: Composition-based stats. Identities = 65/329 (19%), Positives = 130/329 (39%), Gaps = 12/329 (3%) Query: 28 IEIELLSQLLKGYSVNE-ISKRRNRSIKT-VSCQKMKLYKKLNVKSDLTLWR---DVFLR 82 + ELLS L + + +E + SI + + + L +D L+R D Sbjct: 815 LASELLSGLSEPWRSSEGVEVSVGVSIGICIYPDHGRTPQTLLQGADAALYRAKGDGRGV 874 Query: 83 FKAYLQPKNIICDNFNSSVLPVVSSKGESMAHYNIYYQPIYNAKNGNIAGCDVTIALKNS 142 ++ Y I + + + ++YQP + ++G I G + + ++ Sbjct: 875 YRYYADEMTRIARERLH--IEARLRRALADGQLLLHYQPQVDLRSGRIIGAEALVRWQDP 932 Query: 143 DGSAFALDSDRINYNPNDNKVS----YLFGHINKLFSPIKNNLPHGFFITININPEDILT 198 + I + ++ G + + + +N++P Sbjct: 933 EQGLI-PPVRFIPVAEATGLIGEIGAWVLGEACRQARAWLDAGLPALTVAVNVSPRQFHQ 991 Query: 199 CDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSLRRIRNNNVYLSLNDFGMGY 258 D+ + + + G L L+ + + L+R+R V ++++DFG GY Sbjct: 992 ADLATQVMQVLVETGLPPTHLELELTEGALMEREAEALQVLQRLRGLGVGVAIDDFGTGY 1051 Query: 259 AELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSKQLHIDVIADGIETKKQAG 318 + L+ L+ P + + ++ DI + IA II + L I V+A+G+ET +Q Sbjct: 1052 SSLASLKRFPIDVLKIDRSFITDIPDDPDDMEIAAAIIAMGHSLGILVLAEGVETAEQLA 1111 Query: 319 YMIERGVKYLKGIALSSPLPADAFVRKLL 347 ++ +R +G S PLPA AF + L Sbjct: 1112 FLQQRNCDRYQGFLRSRPLPAQAFEQLLR 1140 >UniRef50_A1K5F7 EAL/GGDEF-domain containing signaling protein n=1 Tax=Azoarcus sp. BH72 RepID=A1K5F7_AZOSB Length = 576 Score = 335 bits (859), Expect = 2e-90, Method: Composition-based stats. Identities = 59/336 (17%), Positives = 125/336 (37%), Gaps = 17/336 (5%) Query: 21 FPCLLSEIEIE-----LLSQLLKGYSVNEISKRRNRSIKTVSCQ-KMKLYKKLNVKSDLT 74 P ++ + E LL + + N+I S+ +L + ++ Sbjct: 239 LPGVVEREQAEIAARWLLRAFEQPFMKNDIELFLTASVGIAMVGGDGADVFELLMNAEAA 298 Query: 75 LWR---DVFLRFKAYLQPKNIICDNFNSSVLPVVSSKGESMAHYNIYYQPIYNAKNGNIA 131 + R + Y + N + L ++YQPI + +G + Sbjct: 299 VARVKCQGGNGVRCYDRAMN--AASAERLTLEAELRHAVERGELRLFYQPIVDP-DGTVR 355 Query: 132 GCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHI----NKLFSPIKNNLPHGFFI 187 + + ++ + A D I ++ + + + F + Sbjct: 356 AAEALVRWQHPEQGLLAPD-RFIPLADETGLITEIGAWVLTEACYQGRCWHDAGHERFRV 414 Query: 188 TININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSLRRIRNNNV 247 ++N++ + ++ G L L+ + + + LR ++N V Sbjct: 415 SVNVSAVQFGQPRLLETVREALRGSGFPPACLTLEITESSLMSDVESAAGMLRSLKNMGV 474 Query: 248 YLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSKQLHIDVI 307 ++++DFG GY+ LS+L+ +P V + K+ D+ +N I II L+ L + + Sbjct: 475 RIAVDDFGTGYSSLSYLRRLPIDTVKIDKSFVRDVSNNGEDAAIVRAIIALAHSLGLGTV 534 Query: 308 ADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFV 343 A+G+ET +Q + G +G P+PA+ FV Sbjct: 535 AEGVETAEQEATLRREGCDSFQGYRYGRPVPAEVFV 570 >UniRef50_B7GID3 Multidomain signal transduction protein (Contains GGDEF and EAL domains) n=1 Tax=Anoxybacillus flavithermus WK1 RepID=B7GID3_ANOFW Length = 552 Score = 335 bits (859), Expect = 2e-90, Method: Composition-based stats. Identities = 54/324 (16%), Positives = 129/324 (39%), Gaps = 11/324 (3%) Query: 30 IELLSQLLKGYSVNEISKRRNRSIK-TVSCQKMKLYKKLNVKSDLTL---WRDVFLRFKA 85 +++ + + + SI +V + L +DL L + + Sbjct: 223 RDVIQIFSTPFQLTDQELTITPSIGVSVFPDDATDWTTLLSFADLALEIAKENGGNTYCF 282 Query: 86 YLQPKNIICDNFNSSVLPVVSSKGESMAHYNIYYQPIYNAKNGNIAGCDVTIALKNSDGS 145 Y + + K + ++YQPI + + G+I + + + Sbjct: 283 YTNELKKTNEE--KLYIQHSIRKALKQNEFTLHYQPIVDIQTGDIVAVEALLRWFHPKRG 340 Query: 146 AFALDSDRINYNPNDNKVSYLFGHI----NKLFSPIKNNLPHGFFITININPEDILTCDI 201 + + I N + + + + K I +N++ + L D+ Sbjct: 341 WISP-ATFIPIAEETNLIQPIGDWVLRNVCEQSKKWKEKGLPHVQIGVNVSIKQFLQADL 399 Query: 202 ERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSLRRIRNNNVYLSLNDFGMGYAEL 261 + H ++ + + L L+ + ++ I + L+ +++ + L+++DFG GY+ L Sbjct: 400 VKHIEHVLRTYDLDPFCLKLEITESMAMHHIDYVLAQLQSLKHLGLQLAVDDFGTGYSSL 459 Query: 262 SHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSKQLHIDVIADGIETKKQAGYMI 321 ++L+ +P + + ++ D+ +S I +I ++ L + V+A+G+ET++Q + Sbjct: 460 NYLKKLPVDIIKIDRSFVQDMVKHSYDLSIVRAVIQVAHSLQMKVVAEGVETEEQLAILK 519 Query: 322 ERGVKYLKGIALSSPLPADAFVRK 345 G +G S PL A+ F + Sbjct: 520 REGCDRAQGYYFSKPLAAEQFEQL 543 >UniRef50_Q89VU0 Bll0955 protein n=2 Tax=cellular organisms RepID=Q89VU0_BRAJA Length = 955 Score = 335 bits (859), Expect = 2e-90, Method: Composition-based stats. Identities = 57/332 (17%), Positives = 125/332 (37%), Gaps = 14/332 (4%) Query: 22 PCLLSEIEIELLSQLLKGYSVNEISKRRNRSIKTVSCQKMKL-YKKLNVKSDLTLW---- 76 P ++ L+ + + S S+ L +L +DL L+ Sbjct: 621 PQSAEKLARRLVEIIGHPPPLESQSIHVGVSVGIAIAPDHGLDADELMKCADLALYQAKA 680 Query: 77 --RDVFLRFKAYLQPKNIICDNFNSSVLPVVSSKGESMAHYNIYYQPIYNAKNGNIAGCD 134 R + F+ ++ + + L +++ +QP ++ + G + Sbjct: 681 RGRGAYQLFEPEMEEEAR-----SRHALEHNLRGALEAREFHLVFQPQVRLESSELTGFE 735 Query: 135 VTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINKLFSPIKNNLPHGFFITININPE 194 + K+ + ++ I + + + + + + P + +N++P Sbjct: 736 ALLRWKHPSRGFVSP-AEFIPIAEENGLIVPIGEWVLRTACATAASWP-DVTVAVNLSPV 793 Query: 195 DILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSLRRIRNNNVYLSLNDF 254 + + G RL L+ + L L ++R V +SL+DF Sbjct: 794 QFRARGLAAMVTSALAEAGLPPQRLELEVTETALLDDSEATIEILHQLRALGVRVSLDDF 853 Query: 255 GMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSKQLHIDVIADGIETK 314 G+GY+ LS+L+ PF + + ++ + + + I TI L L ++ A+G+ET+ Sbjct: 854 GVGYSSLSYLRKFPFDRIKIDRSFVGTLGESPESVAIVRTIASLGSVLGVETTAEGVETE 913 Query: 315 KQAGYMIERGVKYLKGIALSSPLPADAFVRKL 346 +Q ++ E G ++G P PA R + Sbjct: 914 EQLDFVRECGCTAVQGYYFGRPCPAAEVARTI 945 >UniRef50_C1DBY5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor n=3 Tax=Neisseriaceae RepID=C1DBY5_LARHH Length = 839 Score = 335 bits (859), Expect = 2e-90, Method: Composition-based stats. Identities = 53/320 (16%), Positives = 132/320 (41%), Gaps = 17/320 (5%) Query: 41 SVNEISKRRNRSIKTVSCQKMKLYKKLNV-KSDLTLWRDV------FLRFKAYLQPKNII 93 +++ S+ ++ +D ++R F F A + Sbjct: 519 TLDGHDVYVTASVGIAIYPDDGSTPEVLRMNADTAMYRAKERGKNNFQFFTADMNAS--- 575 Query: 94 CDNFNSSVLPVVSSKGESMAHYNIYYQPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDR 153 L + + + +++QP + +G+I G + + ++ + + +D Sbjct: 576 --TLARLRLESNLHRALARQEFQLHFQPKVDLAHGHIYGMEALLRWRSHELGPVSP-ADF 632 Query: 154 INYNPNDNKVSYLFGHIN-KLFSPIKNNLPHGF---FITININPEDILTCDIERECLHFI 209 I N +S + + + ++ L G + +N++ + + DI + Sbjct: 633 IPIAEESNLISTIGEWVLEQACRQARHWLNLGLLPGTVAVNLSSKQMTQGDIVATVRRIL 692 Query: 210 KVFGTERIRLVLQFSTKEELYIIRRYQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPF 269 + L L+ + + +L+ ++ V ++++DFG GY+ LS+L+ +P Sbjct: 693 EHSNLPGHYLELEITESVAMDNTGEMIRTLKNLKALGVRIAIDDFGTGYSSLSYLKQLPI 752 Query: 270 SYVNLHKTMFHDIESNSLTDIIATTIIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLK 329 + + ++ D+ + IA+ II + + L++ +A+G+E ++ ++++ G +Y + Sbjct: 753 DVLKIDRSFVTDLHEDRDDAAIASAIISMGQSLNLQPVAEGVEREEHRQFLLDHGCQYGQ 812 Query: 330 GIALSSPLPADAFVRKLLAS 349 G S P+PA + LL S Sbjct: 813 GYLFSRPVPAATMEQLLLES 832 >UniRef50_C8SP12 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Mesorhizobium opportunistum WSM2075 RepID=C8SP12_9RHIZ Length = 894 Score = 335 bits (859), Expect = 2e-90, Method: Composition-based stats. Identities = 56/339 (16%), Positives = 137/339 (40%), Gaps = 17/339 (5%) Query: 24 LLSEIEIELLSQLLKGYSVNEISKRRNRSIKT-VSCQKMKLYKKLNVKSDLTLWR----- 77 L++E +L + + + + + R SI + K + L +D ++R Sbjct: 562 LIAETLQKLRTAIAEPLQLGDHCVRATASIGIATYPKDGKAPESLVANADAAMYRAKAVG 621 Query: 78 -DVFLRFKAYLQPKNIICDNFNSSVLPVVSSKGESMAHYNIYYQPIYNAKNGNIAGCDVT 136 D F + + +L + + + ++YQP + ++ I + Sbjct: 622 RDNFQFYAPEFNTRA-----HERFLLQEELRTALARSQFELFYQPQIDLRSVQIVAVEAL 676 Query: 137 IALKNSDGSAFALDSDRINYNPNDNKVSYLFGHI----NKLFSPIKNNLPHGFFITININ 192 I + A A I + + + + ++ +++N++ Sbjct: 677 IRWNHPAHGAMAP-VGFIPTAEETGLIVPIGDWVLHEACRQNKAWQDLGLEPITVSVNVS 735 Query: 193 PEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSLRRIRNNNVYLSLN 252 ++ +H + E L L+ + + + +++ ++++ V +S++ Sbjct: 736 ARQFSEKNLVERVVHALSESDLEGCYLELELTESLIMQDVGLAVTTMNKLQSLGVQISID 795 Query: 253 DFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSKQLHIDVIADGIE 312 DFG GY+ LS L+ P + + + K+ D+ +N +A+ +I L ++L + VIA+G+E Sbjct: 796 DFGTGYSSLSALKTFPIARLKIDKSFIDDVATNEDDQAVASAVISLGQKLKMRVIAEGVE 855 Query: 313 TKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLLASLK 351 T +Q ++ + ++G S P+ + R L + + Sbjct: 856 TDEQVAFLRKNNCDEMQGYHFSKPVCSREIERLLESRSR 894 >UniRef50_Q1H367 Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) n=1 Tax=Methylobacillus flagellatus KT RepID=Q1H367_METFK Length = 1070 Score = 335 bits (859), Expect = 2e-90, Method: Composition-based stats. Identities = 62/331 (18%), Positives = 129/331 (38%), Gaps = 11/331 (3%) Query: 25 LSEIEIELLSQLLKGYSVNEISKRRNRSIKT-VSCQKMKLYKKLNVKSDLTLWR---DVF 80 L + +++ L + + + + + SI V L +D+ ++R D Sbjct: 716 LVNVARKIMHALAQPFILMQQELYISASIGISVYPDDGVDISSLLKNADMAMYRAKDDGK 775 Query: 81 LRFKAYLQPKNIICDNFNSSVLPVVSSKGESMAHYNIYYQPIYNAKNGNIAGCDVTIALK 140 F Y N ++ + L + +++ YQ + NI G + I Sbjct: 776 NTFHFYSADGN--ANSVSRLTLENSLRRALERNEFSLLYQAKLDLAEQNIIGAEALIRWH 833 Query: 141 NSDGSAFALDSDRINYNPNDNKVSYLFGHINKLFSP----IKNNLPHGFFITININPEDI 196 +++ + D I + + + + + + +NI+ Sbjct: 834 SAELGMVSP-QDFIPVAEETGMIIEIGEWVLQQACRDACHWQEVAGRPIRVGVNISARQF 892 Query: 197 LTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSLRRIRNNNVYLSLNDFGM 256 + + + ++ G L L+ + + R L+ RN Y+ ++DFG Sbjct: 893 REDSLYQAISNALEESGLTPNCLELEITESMIMQNAERASQMLQHFRNLGSYVLIDDFGT 952 Query: 257 GYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSKQLHIDVIADGIETKKQ 316 GY+ L +L++ P + + ++ DI +S I II ++ L I+V+A+G+ET+ Q Sbjct: 953 GYSSLGYLKHFPIDSLKIDRSFVRDIPQDSDDMAITQAIIAMAHSLKINVVAEGVETQAQ 1012 Query: 317 AGYMIERGVKYLKGIALSSPLPADAFVRKLL 347 ++ +G L+G S PL + FV L Sbjct: 1013 LEFLRGQGCDQLQGYIFSRPLVVEDFVGLLR 1043 >UniRef50_A1KCA9 GGDEF/EAL/PAS/PAC-domain containing protein n=1 Tax=Azoarcus sp. BH72 RepID=A1KCA9_AZOSB Length = 689 Score = 335 bits (859), Expect = 2e-90, Method: Composition-based stats. Identities = 57/328 (17%), Positives = 132/328 (40%), Gaps = 7/328 (2%) Query: 28 IEIELLSQLLKGYSVNEISKRRNRSIKTV-SCQKMKLYKKLNVKSDLTLWRDVFLRFK-A 85 + ++L + +++ + SI K + L +D+ +++ Sbjct: 355 LAEKILEVFAAPFDLDDRELTISPSIGIARYPDDGKDFPALLQSADIAMYQAKREGRNGF 414 Query: 86 YLQPKNIICDNFNSSVLPVVSSKGESMAHYNIYYQPIYNAKNGNIAGCDVTIALKNSDGS 145 + + S +L + ++ YQP+ + +G I G + + ++ Sbjct: 415 RMFSIEMNAPILESLLLETQLRRALDHGQLSLVYQPMVDIASGRIVGAEALLRWQHPQHG 474 Query: 146 AFALDSDRINYNPNDNKVSYLFGHINKL----FSPIKNNLPHGFFITININPEDILTCDI 201 + I + + + + + + +N++ +I Sbjct: 475 EISP-VRFIPVAEESGLILPIGEWVLEQALGQVQRWRAAGHPDLVMAVNLSALQFERLNI 533 Query: 202 ERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSLRRIRNNNVYLSLNDFGMGYAEL 261 L + +G L L+ + + R +++ + + V LS++DFG GY+ L Sbjct: 534 SNTVLRLLDHYGLPGSALELELTESVLMEDAERAVAAMLNLADRGVRLSVDDFGTGYSSL 593 Query: 262 SHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSKQLHIDVIADGIETKKQAGYMI 321 ++L +P + + + ++ +I S++ +A TI+DL++ L ++VIA+G+E + Q + Sbjct: 594 AYLTRLPLAKLKIDRSFVRNIPSDASARSVARTILDLARSLALEVIAEGVENEAQLLLLR 653 Query: 322 ERGVKYLKGIALSSPLPADAFVRKLLAS 349 E +G S P+PA AF L A+ Sbjct: 654 EWCCDQAQGYLYSRPVPARAFEALLRAA 681 >UniRef50_B1Y791 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Leptothrix cholodnii SP-6 RepID=B1Y791_LEPCP Length = 1066 Score = 335 bits (859), Expect = 2e-90, Method: Composition-based stats. Identities = 66/338 (19%), Positives = 138/338 (40%), Gaps = 11/338 (3%) Query: 18 NIEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIKT-VSCQKMKLYKKLNVKSDLTLW 76 ++ P +++ EL+ L + V SI + +L +D ++ Sbjct: 717 HLREPQDAAQVAQELIGLLETPFRVAGQEVYVQASIGISLYPDDGLEVGELVRDADAAMY 776 Query: 77 ---RDVFLRFKAYLQPKNIICDNFNSSVLPVVSSKGESMAHYNIYYQPIYNAKNGNIAGC 133 R ++ Y + + L + + ++YQP+Y + + G Sbjct: 777 QAKRAGRGVYRFYTESLTTAAQS--RLALDTRLRRALENKEFVLWYQPLYRLADRCLIGL 834 Query: 134 DVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINK-LFSPIKNNLPHGF---FITI 189 + + L G ++ I +++ L + + + L G I I Sbjct: 835 EALVRLNQP-GLPPIGPAEFIPLLEETGQITTLGAWVTQEACRQGRAWLDEGLDFGRIAI 893 Query: 190 NINPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSLRRIRNNNVYL 249 N++P++I + ++ G RL L+ + + R ++ L R+R V L Sbjct: 894 NLSPQEIRRGQTDERVREALERSGLPAERLELELTESGLMEQGERAEAFLHRLRALGVRL 953 Query: 250 SLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSKQLHIDVIAD 309 +++DFG GY+ L++L+ P S + + ++ D+ +++ + T++ + + L I V+A+ Sbjct: 954 AIDDFGTGYSSLAYLKRFPVSKLKIDRSFVRDLPADANDAQLVQTMVSMGRNLGISVLAE 1013 Query: 310 GIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLL 347 G+ET+ Q Y+ G +G S P PAD L Sbjct: 1014 GVETEAQFDYLRSLGCDAAQGYFFSPPRPADEARHWLR 1051 >UniRef50_A0LAF7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Magnetococcus sp. MC-1 RepID=A0LAF7_MAGSM Length = 951 Score = 334 bits (858), Expect = 2e-90, Method: Composition-based stats. Identities = 60/327 (18%), Positives = 139/327 (42%), Gaps = 11/327 (3%) Query: 28 IEIELLSQLLKGYSVNEISKRRNRSIKTVSC-QKMKLYKKLNVKSDLTLWRDVFL---RF 83 + +++QL +S+ E SI Q Y L + +D +++ + Sbjct: 608 VAETIINQLQVPFSIEENELFVGASIGIAVHGQDGDDYDSLTMNADAAMFKAKESGKGTY 667 Query: 84 KAYLQPKNIICDNFNSSVLPVVSSKGESMAHYNIYYQPIYNAKNGNIAGCDVTIALKNSD 143 K + NI N V+ + ++YQP +A++ I G + + + Sbjct: 668 KFFTPDMNI--QNAKRLVMEAELRRAVDNQELMLHYQPKVDAESRQIVGMEALVRWVHPT 725 Query: 144 GSAFALDSDRINYNPNDNKVSYLFGHIN-KLFSPIKNNLPHGF---FITININPEDILTC 199 + I + L + + + +K G + +N++P Sbjct: 726 RGVI-PPGEFIPLAEETGLIVPLGELVLTRACAQVKQWWDMGLPQVQVAVNLSPRQFQEP 784 Query: 200 DIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSLRRIRNNNVYLSLNDFGMGYA 259 ++ + ++ G L L+ + ++ + +++++++ V +S++DFG GY+ Sbjct: 785 NLIEKVSEILRKTGFPATGLELEITESIAMHDVDNTIETVKKLKDLGVRISIDDFGTGYS 844 Query: 260 ELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSKQLHIDVIADGIETKKQAGY 319 LS+L+ P + + ++ D+ + I ++II ++K + + V+A+G+ET +Q + Sbjct: 845 SLSYLKKFPLHALKIDQSFVRDLGGDDDGASIISSIISMAKAMALGVVAEGVETAQQMEF 904 Query: 320 MIERGVKYLKGIALSSPLPADAFVRKL 346 + + + ++G LS PLP F+ L Sbjct: 905 LRGQECQQVQGFFLSKPLPPSDFLALL 931 >UniRef50_C6E011 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=2 Tax=Geobacter RepID=C6E011_GEOSM Length = 869 Score = 334 bits (858), Expect = 2e-90, Method: Composition-based stats. Identities = 63/331 (19%), Positives = 129/331 (38%), Gaps = 11/331 (3%) Query: 30 IELLSQLLKGYSVNEISKRRNRSIKT-VSCQKMKLYKKLNVKSDLTLWRDVFLR---FKA 85 ++ L +GY+V SI V + ++L +DL ++ ++ Sbjct: 537 RKIQQTLSQGYTVESHELNITPSIGISVYPTDGETVQELMKNADLAMYHAKSAGRNSYQF 596 Query: 86 YLQPKNIICDNFNSSVLPVVSSKGESMAHYNIYYQPIYNAKNGNIAGCDVTIALKNSDGS 145 + Q N+ VL ++YQP + K+G + G + + ++ Sbjct: 597 FTQEMNLTVQA--RLVLESDLRTALERDEMMLHYQPQIDLKSGEVVGVEALLRWRHPVRG 654 Query: 146 AFALDSDRINYNPNDNKVSYLFGHI----NKLFSPIKNNLPHGFFITININPEDILTCDI 201 A A D I + + + + + + + +N++ ++ Sbjct: 655 AVAPDV-FIPVAEDTGLILSIGEFALKSACEQLALWISQGLSPLRMAVNLSARQFKQSNL 713 Query: 202 ERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSLRRIRNNNVYLSLNDFGMGYAEL 261 + G L L+ + + LR +R V L+++DFG GY+ L Sbjct: 714 PSLLADILAATGVAAHLLELEITESSAMDDPNTAIVHLRTLREMGVELAIDDFGTGYSSL 773 Query: 262 SHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSKQLHIDVIADGIETKKQAGYMI 321 S+L+ P + + + ++ I+++S IA I L+ L +V+A+G+ET+ Q ++ Sbjct: 774 SYLKLFPVNRLKIDRSFVRGIDTDSEDAEIAAATIALAHNLGKEVVAEGVETEAQCRFLR 833 Query: 322 ERGVKYLKGIALSSPLPADAFVRKLLASLKQ 352 + L+G S PL A L A+ + Sbjct: 834 GQQCDILQGYFFSEPLSAAGIASYLAANRRP 864 >UniRef50_C6P6Y2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P6Y2_9PROT Length = 814 Score = 334 bits (858), Expect = 2e-90, Method: Composition-based stats. Identities = 64/349 (18%), Positives = 137/349 (39%), Gaps = 10/349 (2%) Query: 5 KIKLNLIDYDSIVNIEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIKTVSCQKMKLY 64 + + L D ++E + ++L+ L Y + R SI +L Sbjct: 463 EFVVMLEDLGGH-DLEAAAQTEAVGEKILAMLGLPYQLVAHEYRCTPSIGATLFSGHELA 521 Query: 65 -KKLNVKSDLTLWRDVFLRFKAYLQPKNIICDNFN-SSVLPVVSSKGESMAHYNIYYQPI 122 ++L ++D+ +++ + D L K + ++YQ Sbjct: 522 KEELLKRADIAMYQAKQAGRNTVRFFDQQMQDAVTARVALEGELHKALDRQQFRLHYQIQ 581 Query: 123 YNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHI----NKLFSPIK 178 +A +G G + I + + D I + + + + + Sbjct: 582 VDA-SGRPLGAEALIRWMHPERGLVPPD-QFIGMAEETDLILPIGQWVMDTACAQLKTWQ 639 Query: 179 NNLP-HGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQS 237 + P + +N++ D + ++ + L L+ + L I Sbjct: 640 QHAPTRDLVLAVNVSATQFHQLDFVFQVRATVQRHAIDPKLLKLELTESMLLENIEDTIR 699 Query: 238 SLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIID 297 ++ ++ V SL+DFG GY+ L +L+ +P + + ++ DI S+S I TII Sbjct: 700 TMNALKEIGVQFSLDDFGTGYSSLQYLKRLPLDQIKIDQSFVRDIASDSNDREIVGTIIA 759 Query: 298 LSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKL 346 +++ L++DVIA+G+ET++Q ++ + G + +G P+P + F L Sbjct: 760 MAQNLYLDVIAEGVETEEQRQFLQDNGCTHFQGYLFGKPVPVEQFEAML 808 >UniRef50_A4U3H4 PAS:GGDEF n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4U3H4_9PROT Length = 904 Score = 334 bits (858), Expect = 3e-90, Method: Composition-based stats. Identities = 63/332 (18%), Positives = 131/332 (39%), Gaps = 18/332 (5%) Query: 25 LSEIEIELLSQLLKGYSVNEISKRRNRSIKTVSCQKMKLYKKLNVKSDLTLWRD------ 78 + I ++++ L + YS+N SI + L +SDL +++ Sbjct: 574 VEAIGLKIIEALSQPYSLNNQHYVCTPSIGATLFFGHVVADDLLKQSDLAMYKAKAEGGA 633 Query: 79 VFLRFKAYLQPKNIICDNFNSSVLPVVSSKGESMAHYNIYYQPIYNAKNGNIAGCDVTIA 138 F ++ I + + +G + ++YQP NG + G + + Sbjct: 634 SIHFFDPKMEEAVI-----KRAKIEADLRQGLIKKQFLLHYQPQI-FSNGRMTGVEALVR 687 Query: 139 LKNSDGSAFALDSDRINYNPNDNKVSYLFGHINKLFSPIKNNLP-----HGFFITININP 193 ++ SD I + L + + + +N++ Sbjct: 688 WQHPVRG-LVPPSDFIPLAEETGLILQLGNWVLEAACKQLAEWATRPELADLTVAVNVSV 746 Query: 194 EDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSLRRIRNNNVYLSLND 253 + + I+V G RL L+ + ++ + ++ + + SL+D Sbjct: 747 QQFHQPEFVDHIQEVIRVTGANPERLKLELTESMLAENVQDIIKKMFALKADGIGFSLDD 806 Query: 254 FGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSKQLHIDVIADGIET 313 FG GY+ LS+L+ +P + + ++ D+ ++ IA TI++L++ L + VIA+G+ET Sbjct: 807 FGTGYSSLSYLKQLPLDQLKIDQSFVRDVLTDPSDATIAKTIVNLAQSLGLSVIAEGVET 866 Query: 314 KKQAGYMIERGVKYLKGIALSSPLPADAFVRK 345 + Q ++ G +G S PLP + F Sbjct: 867 EAQRNFLETSGCHSCQGYFFSRPLPIEEFEEY 898 >UniRef50_A4U4R0 Sensory box/GGDEF family protein n=3 Tax=Magnetospirillum RepID=A4U4R0_9PROT Length = 840 Score = 334 bits (858), Expect = 3e-90, Method: Composition-based stats. Identities = 61/339 (17%), Positives = 127/339 (37%), Gaps = 12/339 (3%) Query: 16 IVNIEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIKTVSCQKMKLYKK-LNVKSDLT 74 + N++ P S + +++ + + + ++E + SI + + L +DL Sbjct: 496 LTNLDDPEGASNVAESIIASISEPFGLDEHEVNTSTSIGITIFPDDAVDSEVLLKNADLA 555 Query: 75 LWRD---VFLRFKAYLQPKNIICDNFNSSVLPVVSSKGESMAHYNIYYQPIYNAKNGNIA 131 ++R + Y+ + V+ ++YQP+ K G + Sbjct: 556 MFRSKAEGRNNYHFYVAEMDAEIQARK--VVEHDLRVALGTDQLEMHYQPLIEMKTGEVV 613 Query: 132 GCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHI----NKLFSPIKNNLPHGFFI 187 GC+ I K+ + + I + + L I I Sbjct: 614 GCEALIRWKHPTRGWVSP-VEFIPIAERTDLIVPLGRWILHRSCLQGRDWARAGLPPQKI 672 Query: 188 TININPEDILTCD-IERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSLRRIRNNN 246 +N++P + + G +L L+ + + + LR++R+ Sbjct: 673 AVNLSPVQFKNHTALLAMIADILDQTGFPPDQLQLEITEGIAMQNVEATVDVLRQLRDMG 732 Query: 247 VYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSKQLHIDV 306 V +S++DFG GY+ L++L+ P + + ++ DI + + I+ L L V Sbjct: 733 VLISIDDFGTGYSSLNYLKRFPVDKLKIDRSFVVDIGLHPDNAAVVNAIVTLGHSLGTRV 792 Query: 307 IADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRK 345 +G+ET +Q ++ GV +G + LP D F R Sbjct: 793 NVEGVETIEQLDFLKAHGVDEAQGFYFAKALPPDEFARF 831 >UniRef50_Q2SFK1 FOG: EAL domain n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SFK1_HAHCH Length = 1092 Score = 334 bits (857), Expect = 3e-90, Method: Composition-based stats. Identities = 58/325 (17%), Positives = 125/325 (38%), Gaps = 22/325 (6%) Query: 35 QLLKGYSVNEISKRRNRSIKTVS-CQKMKLYKKLNVKSDLTLWRDVFLRFKAYLQPKNII 93 + + + + SI + + L +D + +KA + +N I Sbjct: 618 LVSQPRRLKDKEILVTPSIGVCQFPEDGEDASTLLKNADTAM-------YKAKERGRNRI 670 Query: 94 C---DNFNSSV-----LPVVSSKGESMAHYNIYYQPIYNAKNGNIAGCDVTIALKNSDGS 145 C N S+ + +G +YYQP + G G + + + G Sbjct: 671 CSYTQEMNESIQKRVQMEQDLRRGIENGELELYYQPQLDPHGGGAVGLEALVRWR--KGD 728 Query: 146 AFALDSDRINYNPNDNKVSYLFGHINKLFSP----IKNNLPHGFFITININPEDILTCDI 201 + I ++ + + + ++ +++N++P Sbjct: 729 RMVPPLEFIPIAEETGLITEVDAWVLRAACLQLKMWRDQKQQMVPVSVNLSPRQFQDAYC 788 Query: 202 ERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSLRRIRNNNVYLSLNDFGMGYAEL 261 ++ E L ++ + ++ ++ +++ V LS++DFG GY+ L Sbjct: 789 VELVRKVLQESNIEPGCLKIEVTESMVMHNAEEALRTMTQLKAMGVQLSMDDFGTGYSSL 848 Query: 262 SHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSKQLHIDVIADGIETKKQAGYMI 321 S+L+ PF + + K+ ++ ++ I II L K L I ++A+G+ET +Q +++ Sbjct: 849 SYLKMFPFDQLKIDKSFVRNVTNDPQEAAIIRAIIGLGKTLGIKIVAEGVETVEQYSFLV 908 Query: 322 ERGVKYLKGIALSSPLPADAFVRKL 346 G ++G S PLP A + L Sbjct: 909 RAGCDLIQGYFYSPPLPVAACMHFL 933 >UniRef50_Q47IR9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q47IR9_DECAR Length = 952 Score = 334 bits (857), Expect = 3e-90, Method: Composition-based stats. Identities = 60/323 (18%), Positives = 132/323 (40%), Gaps = 13/323 (4%) Query: 32 LLSQLLKGYSVNEISKRRNRSIKTVSCQKMKLY-KKLNVKSDLTLWRDVFLRFK---AYL 87 LLS+L + + + + R SI + + + L + DL +++ + Sbjct: 630 LLSELGRTFQLGNVIHRNTVSIGATLFKGEQESIESLMRQIDLAIYQAKGAGRNTVRFFD 689 Query: 88 QPKNIICDNFNSSVLPVVSSKGESMAHYNIYYQPIYNAKNGNIAGCDVTIALKNSDGSAF 147 I + + + ++YQ ++G I G +V + ++ + Sbjct: 690 PSMEIALRE--RAAIEEALRYAIEEEQFLLHYQAQI-GEDGRIEGAEVLLRWQHPERGMV 746 Query: 148 ALDSDRINYNPNDNKVSYLFGHINKLFSPIKNNLPH-----GFFITININPEDILTCDIE 202 + + I + L + K + G + +N++ + D Sbjct: 747 SP-AIFIPLAEETGDIVLLGSWVLKQAAAQLARWAESPVMAGLVLAVNVSAVQLRQPDFV 805 Query: 203 RECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSLRRIRNNNVYLSLNDFGMGYAELS 262 + ++ G + RL L+ + + + + ++ ++ + SL+DFG GY+ LS Sbjct: 806 EQVTTVLREAGADPGRLKLELTESMLVNDVEATIAKMQSLKAIGIGFSLDDFGTGYSSLS 865 Query: 263 HLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSKQLHIDVIADGIETKKQAGYMIE 322 +L+ +P S + + ++ D+ ++ IA++++ L+K L + VIA+G+ET+ Q + Sbjct: 866 YLKRLPLSQLKIDQSFVRDVLVDANDVAIASSVVALAKSLGLGVIAEGVETEAQRELLAG 925 Query: 323 RGVKYLKGIALSSPLPADAFVRK 345 G +G S PLP F R Sbjct: 926 IGCHCYQGYLFSRPLPIGDFERL 948 >UniRef50_Q2Y9Y0 Response regulator receiver (CheY-like) modulated diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) n=2 Tax=Betaproteobacteria RepID=Q2Y9Y0_NITMU Length = 756 Score = 334 bits (857), Expect = 3e-90, Method: Composition-based stats. Identities = 61/350 (17%), Positives = 138/350 (39%), Gaps = 37/350 (10%) Query: 35 QLLKGYSVNEISKRRNRSIKT-VSCQKMKLYKKLNVKSDLTLW------RDVFLRFKAYL 87 L + + + SI V L D ++ RD + F + Sbjct: 397 ALRQPFDLQGHQVTVTASIGISVYPIDSIDADTLVKNGDTAMYQSKTAGRDTYRFFTPEM 456 Query: 88 QPKNIICDNFNSSVLPVVSSKGESMAHYNIYYQPIYNAKNGNIAGCDVTIALKNSDGSAF 147 + I K + ++YQP + NG + G + + K + Sbjct: 457 NIRAI-----EKLDQENALRKALDREEFVLHYQPKVDLSNGWVTGMEALLRWKRPEHG-V 510 Query: 148 ALDSDRINYNPNDNKV----SYLFGHINKLFSPIKNNLPHGFFITININPEDILTCDIER 203 + I + +++ + + + ++ +++N++ + + Sbjct: 511 VEPLEFIPALEQTGLITRVGAWVIESVCRQIAEWRHAGIGEIPVSVNVSGRQFSRSTLNQ 570 Query: 204 ECLHFIKVFGTER--------------------IRLVLQFSTKEELYIIRRYQSSLRRIR 243 + + + G + L L+ + + ++ S L+R++ Sbjct: 571 DVIRATQANGIQPALLEFELQTERALRENSIDSDLLELELTESSLMMHAKKTVSILQRLK 630 Query: 244 NNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSKQLH 303 + +S++DFG GY+ L++++ P + + ++ +I +NS I T IID++ LH Sbjct: 631 ALGIQISIDDFGTGYSSLAYVKRFPIDVLKIDRSFIQEITTNSADAAITTAIIDMAHSLH 690 Query: 304 IDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLLASLKQV 353 + V+A+G+ET +Q ++ RG ++G LS PLPA+ + LL+ +++ Sbjct: 691 VRVVAEGVETAEQFDFLKGRGCDEVQGFYLSPPLPANEISQLLLSGNRRL 740 >UniRef50_C9P6X4 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Vibrio metschnikovii CIP 69.14 RepID=C9P6X4_VIBME Length = 919 Score = 334 bits (857), Expect = 3e-90, Method: Composition-based stats. Identities = 68/325 (20%), Positives = 141/325 (43%), Gaps = 19/325 (5%) Query: 30 IELLSQLLKGYSVNEISKRRNRSIK-TVSCQKMKLYKKLNVKSDLTLW------RDVFLR 82 ++L L K Y ++ I SI T+ + K +L +DL ++ R+ Sbjct: 587 RKILDTLSKPYYIDNIEHFSTLSIGVTLFLGETKGIDELLKHADLAMYQAKGAGRNTHRF 646 Query: 83 FKAYLQPKNIICDNFNSSVLPVVSSKGESMAHYNIYYQPIYNAKNGNIAGCDVTIALKNS 142 F +Q K + + + + + +YYQP +G + G + I ++ Sbjct: 647 FNPEMQAKVL-----EHAAMANDIRHALTRNEFTLYYQPQV-THDGQLTGAEALIRWQHP 700 Query: 143 DGSAFALDSDRINYNPNDNKV----SYLFGHINKLFSPIKNN-LPHGFFITININPEDIL 197 + + I + ++ ++ + +N+ L + INI+ + Sbjct: 701 KQGTISP-IEFIPIAEETGLILPLGEWVLDQACQVLAVWQNSPLTDSLVLAINISAKQFH 759 Query: 198 TCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSLRRIRNNNVYLSLNDFGMG 257 ++ L ++ + RL L+ + + + + +++ V SL+DFG G Sbjct: 760 QTGFVQQVLEALQRYRANPDRLKLELTESMLHEDLEDTITKMSQLKKYGVSFSLDDFGTG 819 Query: 258 YAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSKQLHIDVIADGIETKKQA 317 Y+ L++L+ +P + + K+ D+ +NS IA TI+ L+K +++ VIA+G+ET++Q Sbjct: 820 YSSLNYLKRLPLDQLKIDKSFVRDLLTNSHDADIARTIVSLAKSMNLAVIAEGVETQEQR 879 Query: 318 GYMIERGVKYLKGIALSSPLPADAF 342 + G +G S P+P +AF Sbjct: 880 LALASYGCLDFQGYLFSRPVPLEAF 904 >UniRef50_Q20XI9 Diguanylate cyclase/phosphodiesterase n=11 Tax=Bradyrhizobiaceae RepID=Q20XI9_RHOPB Length = 915 Score = 334 bits (857), Expect = 3e-90, Method: Composition-based stats. Identities = 61/327 (18%), Positives = 126/327 (38%), Gaps = 4/327 (1%) Query: 25 LSEIEIELLSQLLKGYSVNEISKRRNRSIKT-VSCQKMKLYKKLNVKSDLTLWRDVFL-R 82 ++E+ L + + SI ++ +L +DL +++ R Sbjct: 574 VTELVARLFETIRAPCECLGHQISTDASIGIALAPPHGTDTDQLIKNADLAMYQAKADGR 633 Query: 83 FKAYLQPKNIICDNFNSSVLPVVSSKGESMAHYNIYYQPIYNAKNGNIAGCDVTIALKNS 142 + L + K + + IYYQPI +NG++ GC+ + ++ Sbjct: 634 RTCRFFEPRMEASAKERRTLELELRKAIADCAFEIYYQPIVELRNGDVIGCEALLRWRHP 693 Query: 143 DGSAFALDSDRINYNPNDNKVSYLFGHINKLFSPIKNNLPHGFFITININPEDILTCDIE 202 + + I ++ L + + N P + +N++P + + Sbjct: 694 QRGMISP-AKFIPVAEATGLINELGEWVLRTACAEAANWPAEMSVAVNVSPVQFKSRTLP 752 Query: 203 RECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSLRRIRNNNVYLSLNDFGMGYAELS 262 + + G RL L+ + + S L ++ V ++L+DFG GY+ LS Sbjct: 753 LKVAAALAASGLPASRLELEITEAVLIDDDETALSVLHELKTLGVRIALDDFGTGYSSLS 812 Query: 263 HLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSKQLHIDVIADGIETKKQAGYMIE 322 +LQ PF + + + I I +++++ H+ A+G+ET +Q + Sbjct: 813 YLQRFPFDKIKIDRCFIDGIARPDGASAIVQAVVNIATARHMTTTAEGVETAEQRDLLRG 872 Query: 323 RGVKYLKGIALSSPLPADAFVRKLLAS 349 G +++G S + D VR+L A Sbjct: 873 LGCTHMQGYLFSPAIAPDT-VRQLFAG 898 >UniRef50_B7GHW2 Multidomain signal transduction protein (GGDEF and EAL domains) n=1 Tax=Anoxybacillus flavithermus WK1 RepID=B7GHW2_ANOFW Length = 765 Score = 334 bits (857), Expect = 3e-90, Method: Composition-based stats. Identities = 56/333 (16%), Positives = 136/333 (40%), Gaps = 11/333 (3%) Query: 25 LSEIEIELLSQLLKGYSVNEISKRRNRSIK-TVSCQKMKLYKKLNVKSDLTLWRD---VF 80 L L+S + +V + R + S+ V + + L +D+ ++R Sbjct: 431 LRRFVHRLVSFSQQPVAVQHLDIRISLSVGVAVYPYDGETVETLMKHADIAMYRAKEQGK 490 Query: 81 LRFKAYLQPKNIICDNFNSSVLPVVSSKGESMAHYNIYYQPIYNAKNGNIAGCDVTIALK 140 +++ + + + +++ + + ++YQP ++ + G + G + I Sbjct: 491 NQYQFFNGEMDRVV--LQKTMIETALHEAIDNKQFTLFYQPQFDVQTGELMGVEALIRWV 548 Query: 141 NSDGSAFALDSDRINYNPNDNKVS----YLFGHINKLFSPIKNNLPHGFFITININPEDI 196 + + + + I ++ ++ + +++NI+P+ Sbjct: 549 HPELGTISP-AMFIPIAEETGQIIAIGKWVIEEACRQIQTWNEQHGRSLRMSVNISPKQF 607 Query: 197 LTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSLRRIRNNNVYLSLNDFGM 256 L + ++ +L L+ + ++ + L++++ V++S++DFG Sbjct: 608 LKENFVEHIRAVLQQTQLPPDQLDLEITEGVAVFNEQYTIQKLQQLKQLGVHISIDDFGT 667 Query: 257 GYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSKQLHIDVIADGIETKKQ 316 GY+ LS+L+ P + + + K I + II L+K L + VIA+G+ET +Q Sbjct: 668 GYSSLSYLRKFPINRLKIAKPFIDGITEEKEDVAVVKAIIVLAKNLKLRVIAEGVETLQQ 727 Query: 317 AGYMIERGVKYLKGIALSSPLPADAFVRKLLAS 349 + ++G L P+PAD F + + + Sbjct: 728 LNILRSLQCDEIQGYVLGKPVPADQFAKLYIEN 760 >UniRef50_Q3A6S1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A6S1_PELCD Length = 947 Score = 334 bits (856), Expect = 4e-90, Method: Composition-based stats. Identities = 60/336 (17%), Positives = 130/336 (38%), Gaps = 7/336 (2%) Query: 24 LLSEIEIELLSQLLKGYSVNEISKRRNRSIK-TVSCQKMKLYKKLNVKSDLTLWRDVFLR 82 + ++L + + V++ S SI V Q KL +D+ ++ L Sbjct: 605 TADTVARQILQSIAEPCEVDDQSFFVTASIGGAVYPQHGADGDKLLKNADMAMYASKELG 664 Query: 83 FKAYLQP-KNIICDNFNSSVLPVVSSKGESMAHYNIYYQPIYNAKNGNIAGCDVTIALKN 141 Y + + S L + + + YQP + G + G + + ++ Sbjct: 665 RNTYCTFTEEMNRRVLERSGLEHNLRLALAREEFFLAYQPQVDQATGKVLGSEALLRWRH 724 Query: 142 SDGSAFALDSDRINYNPNDNKVSYLFGHINKLFSPIKNNLP----HGFFITININPEDIL 197 ++ + I + + + + I +N++ Sbjct: 725 AEKGMISP-GQFIPLAEESGLILPIGHWVLQTACAQNKAWQLAGYPPMRIAVNLSARQFQ 783 Query: 198 TCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSLRRIRNNNVYLSLNDFGMG 257 D + +K + L L+ + + +LR +R+ V ++++DFG G Sbjct: 784 QPDFFDQVAQVLKDTELDPRYLELELTESLLMADADVAVETLRALRDLGVGIAIDDFGTG 843 Query: 258 YAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSKQLHIDVIADGIETKKQA 317 Y+ LS+L+ P + + + DI + I T+I ++ L +D++A+G+ET+ Q Sbjct: 844 YSSLSYLKTFPIDRIKIAQEFVLDITRDPGDAAIVETVIAMAHGLGLDIVAEGVETEAQL 903 Query: 318 GYMIERGVKYLKGIALSSPLPADAFVRKLLASLKQV 353 ++ R + ++G P+PA+ F+ L +L V Sbjct: 904 EFLRARRCQVMQGYYFGRPMPAENFIEYLSENLVSV 939 >UniRef50_Q2SF23 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SF23_HAHCH Length = 637 Score = 334 bits (856), Expect = 4e-90, Method: Composition-based stats. Identities = 64/331 (19%), Positives = 133/331 (40%), Gaps = 11/331 (3%) Query: 24 LLSEIEIELLSQLLKGYSVNEISKRRNRSIK-TVSCQKMKLYKKLNVKSDLTLWRDVF-- 80 ++ + ++L L + + + + SI T++ L +DL L+R Sbjct: 301 SVTPVATQILKALKEPIKLKKHEVIVSTSIGVTLAPTDGANADVLMKNADLALYRAKEHG 360 Query: 81 -LRFKAYLQPKNIICDNFNSSVLPVVSSKGESMAHYNIYYQPIYNAKNGNIAGCDVTIAL 139 R+ Y + N ++ + + +QP N G I + I Sbjct: 361 RDRYHFYTEELN--AHALKQLLMEQELRHALQFEEFTLGFQPQVNLTTGKIVSVEALIRW 418 Query: 140 KNSDGSAFALDSDRINYNPNDNKVSYLFGHINK----LFSPIKNNLPHGFFITININPED 195 + DS I+ ++ + + K +++ I +N++ Sbjct: 419 HHPSKGLVMPDS-FISVAEETGLINPIGRWVLKNACMQMKMLQDLTGSAIKIAVNLSARQ 477 Query: 196 ILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSLRRIRNNNVYLSLNDFG 255 +E+ + G E L L+ + + I+ + L+R+R V L+++DFG Sbjct: 478 FDDPKLEQSIEEALNETGLEPEWLELEVTESMLMGDIQAVTNKLKRLRQTGVSLAIDDFG 537 Query: 256 MGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSKQLHIDVIADGIETKK 315 GY+ LS+L+ +P + + + + DI +S I + II ++ +L + V+A+G+ET + Sbjct: 538 SGYSSLSYLKKLPVNALKVDREFVRDIPEDSNDMEITSAIIAVAHKLQLKVVAEGVETAE 597 Query: 316 QAGYMIERGVKYLKGIALSSPLPADAFVRKL 346 Q Y++ + +G S PL + L Sbjct: 598 QKEYLLANQCDFAQGYFFSKPLSFEDLYIYL 628 >UniRef50_Q21WZ6 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Betaproteobacteria RepID=Q21WZ6_RHOFD Length = 1355 Score = 334 bits (856), Expect = 4e-90, Method: Composition-based stats. Identities = 62/345 (17%), Positives = 136/345 (39%), Gaps = 12/345 (3%) Query: 19 IEFPCL----LSEIEIELLSQLLKGYSVNEISKRRNRSIKTVS-CQKMKLYKKLNVKSDL 73 + P + + ELL +L + S+ SI S + L ++ Sbjct: 736 LVLPGTPAMGAAHLATELLWKLSRPCSLGMHELTLTASIGIASFPDNGADFDTLFKAVEI 795 Query: 74 TLWRDVFLRFKAYL-QPKNIICDNFNSSVLPVVSSKGESMAHYNIYYQPIYNAKNGNIAG 132 + R Y ++ L + + + YQP + + G I G Sbjct: 796 AMHRAQLKGRDTYQFYSDDMYEQVLAHDRLIKALRQAIVLDQLQLVYQPQVDLQTGQICG 855 Query: 133 CDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHI-NKLFSPIKNNLPHGF---FIT 188 + + ++ + A + I + + + + I+ L HG + Sbjct: 856 VEALLRWQHPELGAVSP-GQFIPLAEESGLIIGIGEWVLRRACQDIRRWLDHGIKVPHVA 914 Query: 189 ININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSLRRIRNNNVY 248 IN +P ++ + + + + ++ + + + R ++ L+ +++ + Sbjct: 915 INASPLQFRDNNLVLQVKAALTESQIDPALIYIEVTESALMDDVPRNEAMLKALKDLGIK 974 Query: 249 LSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSKQLHIDVIA 308 LSL+DFG GY+ LS+L+ PF V + ++ DI ++ ++ I+ ++ L + VIA Sbjct: 975 LSLDDFGTGYSSLSYLKRFPFDQVKIDQSFVRDIATSQSDSLLVKVIVSMAHGLGMKVIA 1034 Query: 309 DGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLLASLKQV 353 +G+ET+ Q M ++G P+ A A + +L + +Q+ Sbjct: 1035 EGVETEAQCEIMRTSICDEIQGYFFCKPISAQA-IEELFSEGRQL 1078 >UniRef50_C6P1Q1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P1Q1_9PROT Length = 1135 Score = 334 bits (856), Expect = 4e-90, Method: Composition-based stats. Identities = 61/322 (18%), Positives = 134/322 (41%), Gaps = 9/322 (2%) Query: 32 LLSQLLKGYSVNEISKRRNRSIK-TVSCQKMKLYKKLNVKSDLTLWRDVFLRFKAYLQPK 90 ++S L K Y + + SI T+ + ++ L ++D+ +++ Sbjct: 808 IISTLNKPYHLEKFEVHSTPSIGATLFDSRPQIIDDLFKQADIAMYQAKKAGRNTMRFFD 867 Query: 91 NIICDNFN-SSVLPVVSSKGESMAHYNIYYQPIYNAKNGNIAGCDVTIALKNSDGSAFAL 149 + D N + L K +N++YQ + + G + I + + Sbjct: 868 PQMQDTLNTRTALEADLRKSIERREFNLFYQIQVD-EMNRPVGAEALIRWIHPKRGMVSP 926 Query: 150 DSDRINYNPNDNKVS----YLFGHINKLFSPIKNN-LPHGFFITININPEDILTCDIERE 204 ++ I + + ++ +NN L + +N++ + D + Sbjct: 927 -AEFIPLAEETDLILNIGLWVLQEACAQLKTWQNNPLTRNLVLAVNVSAKQFRQSDFATQ 985 Query: 205 CLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSLRRIRNNNVYLSLNDFGMGYAELSHL 264 F++ + + +L L+ + I + ++ V SL+DFG GY+ L ++ Sbjct: 986 VRVFVEKYAIDPSKLKLELTESMLQENIEDTILIMNALKEIGVQFSLDDFGTGYSSLQYI 1045 Query: 265 QNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSKQLHIDVIADGIETKKQAGYMIERG 324 + +P + + + ++ HD++ + I II ++K L +DVIA+G+ET++Q ++ +G Sbjct: 1046 KKLPLNQLKIDQSFVHDLDFDRDDKAIVRAIIAMAKSLQLDVIAEGVETQEQRQLLLNKG 1105 Query: 325 VKYLKGIALSSPLPADAFVRKL 346 + +G S PLP F L Sbjct: 1106 CTHFQGYLFSKPLPIREFDALL 1127 >UniRef50_B1ZFY0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=5 Tax=Methylobacterium RepID=B1ZFY0_METPB Length = 833 Score = 334 bits (856), Expect = 4e-90, Method: Composition-based stats. Identities = 58/296 (19%), Positives = 110/296 (37%), Gaps = 12/296 (4%) Query: 55 TVSCQKMKLYKKLNVKSDLTLWR------DVFLRFKAYLQPKNIICDNFNSSVLPVVSSK 108 V + L +D L+R F+A + + + S Sbjct: 520 AVYPSDGSTAETLKRAADTALYRVKDEGRGTVRFFEAAMDEQLQARRR-----IEHELSG 574 Query: 109 GESMAHYNIYYQPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFG 168 +YYQPI N + G I + I + + +D I +++ + Sbjct: 575 AIPRGELQLYYQPIVNGRTGEIETFEALIRWHHPERGCV-PPADFIPLAEQTDQIGRIGA 633 Query: 169 HINKLFSPIKNNLPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEE 228 + PH + +++N++P+ + +G RLVL+ + Sbjct: 634 WVLDTACAAAAAWPHPWRVSVNVSPKQFRQPGFAAGVAAVLGRYGLPPGRLVLEITEGVF 693 Query: 229 LYIIRRYQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLT 288 + L +R V L+L+DFG GY+ LS+LQ F + + ++ + ++ T Sbjct: 694 IQDATMAVEVLTALRTLGVRLALDDFGTGYSSLSYLQRFKFDKIKVDQSFVRRLGRHADT 753 Query: 289 DIIATTIIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVR 344 I I L L + V +G+ET++Q + E G ++G + P P + Sbjct: 754 LTIVRAITHLGHNLGLQVTVEGVETQEQLAMLRELGCDQMQGYLFARPAPMTELSQ 809 >UniRef50_C6XEG9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Betaproteobacteria RepID=C6XEG9_METSD Length = 718 Score = 334 bits (856), Expect = 5e-90, Method: Composition-based stats. Identities = 61/338 (18%), Positives = 135/338 (39%), Gaps = 11/338 (3%) Query: 24 LLSEIEIELLSQLLKGYSVNEISKRRNRSIKT-VSCQKMKLYKKLNVKSDLTLWRD---V 79 LS+ +L+ + S+ SI + K + L +D +++ Sbjct: 384 ALSQTLQRVLALTSEPCSIEGKDFTVTSSIGISLYPDDGKTSETLLKNADTAMYKAKQEG 443 Query: 80 FLRFKAYLQPKNIICDNFNSSVLPVVSSKGESMAHYNIYYQPIYNAKNGNIAGCDVTIAL 139 F+ Y + N I + ++++YQP N + I G + I Sbjct: 444 KNNFQFYTRELNSILVE--RLEMEYQMRNALGHNEFHLHYQPKLNLRTQRITGVEALIRW 501 Query: 140 KNSDGSAFALDSDRINYNPNDNKVSYLFGHINKLFS----PIKNNLPHGFFITININPED 195 N + + I + + + + + + + +++N++P Sbjct: 502 HNPRQGLISP-NRFIPIAEESSLIEQIGSWVLEKACMESIALSQLSGYDVPVSVNVSPRQ 560 Query: 196 ILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSLRRIRNNNVYLSLNDFG 255 ++ ++ G + L L+ + ++ L ++ + L+++DFG Sbjct: 561 FQQSNLVGNISRVLQETGLKPSLLELEITEGTLADTSPQFIKVLNDLKGLGIKLAIDDFG 620 Query: 256 MGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSKQLHIDVIADGIETKK 315 GY+ L +L++ P + + ++ +ES++ I I+ L L I+++A+G+ET++ Sbjct: 621 TGYSSLGYLKHFPIDNLKIDRSFVMGLESDTANQAILKAIVALGHNLGINLVAEGVETER 680 Query: 316 QAGYMIERGVKYLKGIALSSPLPADAFVRKLLASLKQV 353 Q +++ G ++G S PLP D + LLA K V Sbjct: 681 QRDFLLSIGCDEMQGFLFSQPLPFDQAGKLLLAQDKLV 718 >UniRef50_A8FYM5 Signal transduction protein containing a membrane domain an EAL and a GGDEF domain-like protein n=1 Tax=Shewanella sediminis HAW-EB3 RepID=A8FYM5_SHESH Length = 1055 Score = 333 bits (855), Expect = 5e-90, Method: Composition-based stats. Identities = 65/329 (19%), Positives = 133/329 (40%), Gaps = 12/329 (3%) Query: 28 IEIELLSQLLKGYSVNEISKRRNRSIKT-VSCQKMKLYKKLNVKSDLTLWRDVFLR---F 83 + +LL+ + + + + SI V L + +D ++R F Sbjct: 720 VARKLLACFYEPFKLPSSEVVISASIGIGVFPDNGDSVDSLMMNADSAMYRAKEKGRNCF 779 Query: 84 KAYLQPKNIICDNFNSSVLPVVSSKGESMAHYNIYYQPIYNAKNGNIAGCDVTIALKNSD 143 + Y + N L + K + ++YQP ++ NG I GC+ I ++ D Sbjct: 780 QFYTKEMNQYAQE--RLELELDLRKALERDEFVLHYQPQFDP-NGRIIGCEALIRWQHPD 836 Query: 144 GSAFALDSDRINYNPNDNKVSYLFGH-INKLFSPIKNNLPHG---FFITININPEDILTC 199 + + IN + + I+ K L G I++N++ L Sbjct: 837 KGLLSP-GEFINMAEITGLIVPIGKWVIDTACMQHKMWLSQGYPALNISVNLSGRQFLHH 895 Query: 200 DIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSLRRIRNNNVYLSLNDFGMGYA 259 D+ + I G L L+ + + + +L I + +++S++DFG GY+ Sbjct: 896 DLLETVKNAITTSGITPSCLELELTESIMMVNVEETIRTLNAISSLGIHMSIDDFGTGYS 955 Query: 260 ELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSKQLHIDVIADGIETKKQAGY 319 +S L+ P + + + ++ + + I +II ++ L++ VIA+G+ET +Q + Sbjct: 956 SMSCLKRFPVNKLKIDQSFVRGLPQDKEDVAIVKSIIVMAHALNLTVIAEGVETLEQLEF 1015 Query: 320 MIERGVKYLKGIALSSPLPADAFVRKLLA 348 + + +G S P+ A + L A Sbjct: 1016 LKSSRCEEFQGYYFSRPILAADIEQYLQA 1044 >UniRef50_A7K0U5 Sensory box/GGDEF family protein n=14 Tax=Vibrio RepID=A7K0U5_VIBSE Length = 815 Score = 333 bits (855), Expect = 5e-90, Method: Composition-based stats. Identities = 69/333 (20%), Positives = 144/333 (43%), Gaps = 18/333 (5%) Query: 24 LLSEIEIELLSQLLKGYSV-NEISKRRNRSIKT-VSCQKMKLYKKLNVKSDLTLW----- 76 L E ++LS + + + N S R + SI + + + + L +D ++ Sbjct: 489 ALLETVGDILSVFQQPFDLANHDSLRVSTSIGIALYPRDGQDSETLLKNADTAMYLAKKN 548 Query: 77 -RDVFLRFKAYLQPKNIICDNFNSSVLPVVSSKGESMAHYNIYYQPIYNAKNGNIAGCDV 135 R+ + + L K++ + + + + +QP YN + I G + Sbjct: 549 GRNGYAFYSPDLTDKSV-----SHVRIQSALHQAIEKQQLRLEFQPQYNLEQHAIVGVET 603 Query: 136 TIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHI----NKLFSPIKNNLPHGFFITINI 191 + ++ + +D I + + + + + I +N+ Sbjct: 604 LLRWQHPEFG-LVPPADFIPIAEKTGLIQSIGEWVLLHACQQGNAWLEQGVEFGRIAVNV 662 Query: 192 NPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSLRRIRNNNVYLSL 251 + + + + + G RL L+ + L ++ +SL ++R + +SL Sbjct: 663 SALQLQQSNFIQRLSDILNQTGFPAQRLDLEITESFLLIDPQQAIASLNQLRELGIEISL 722 Query: 252 NDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSKQLHIDVIADGI 311 +DFG GY+ LS+L+ +P + + + ++ D+ SNS ++ I II + K L + V+A+GI Sbjct: 723 DDFGTGYSSLSYLKGLPINKLKIDRSFVSDVPSNSDSNAIVNAIIAMGKTLSLKVVAEGI 782 Query: 312 ETKKQAGYMIERGVKYLKGIALSSPLPADAFVR 344 ET++QA Y+ E+G Y +G S P+ A+ R Sbjct: 783 ETQEQADYLFEKGCVYGQGYLFSRPVSAEKLFR 815 >UniRef50_Q2SQ18 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SQ18_HAHCH Length = 721 Score = 333 bits (855), Expect = 6e-90, Method: Composition-based stats. Identities = 59/338 (17%), Positives = 140/338 (41%), Gaps = 14/338 (4%) Query: 19 IEFPCLLSE---IEIELLSQLLKGYSVNEISKRRNRSIKT-VSCQKMKLYKKLNVKSDLT 74 +E P + E I +++ + + +++N+ SI V + + L +D Sbjct: 374 LENPESVDEVIAIANRIMACMKQPFTLNDEEVFITCSIGIAVYPEGGVSAEDLIRNADAA 433 Query: 75 LWRD---VFLRFKAYLQPKNIICDNFNSSVLPVVSSKGESMAHYNIYYQPIYNAKNGNIA 131 L+R + Y + + L + ++ +QP N K + Sbjct: 434 LYRAKAAGRNGYHFYTTGMH--AEALKRLELDRWLREAIERNELSLAFQPKVNLKTRDYT 491 Query: 132 GCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHI----NKLFSPIKNNLPHGFFI 187 G +V + + + ++ I + L + + S + + Sbjct: 492 GAEVLLRWYRPEQGFISP-AEFIPLAEETGLIKELGMWVVRRACQQLSEWRGTPLSHIRL 550 Query: 188 TININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSLRRIRNNNV 247 IN++ + ++ + + ++ F +L + + + + I + L + Sbjct: 551 AINLSAIQLEDKELVHKIDNLLREFDVPPRQLEFELTEEVFIQNIESNMAHLNELIKMGF 610 Query: 248 YLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSKQLHIDVI 307 LS++DFG+GY+ L++L++ P S + + ++ +E+N+ +I +I ++ L++ V+ Sbjct: 611 RLSIDDFGVGYSSLAYLKHFPISCIKIDRSFVSQLETNADDRVIINAVIAMAHNLNLSVV 670 Query: 308 ADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRK 345 A+G+ET+ QA Y+ ++G +G + PLP D + Sbjct: 671 AEGVETEAQAAYLQKQGCDEAQGYLFAKPLPPDQLYKL 708 >UniRef50_A1ALY4 Diguanylate cyclase/phosphodiesterase n=1 Tax=Pelobacter propionicus DSM 2379 RepID=A1ALY4_PELPD Length = 1238 Score = 333 bits (854), Expect = 6e-90, Method: Composition-based stats. Identities = 50/324 (15%), Positives = 114/324 (35%), Gaps = 7/324 (2%) Query: 32 LLSQLLKGYSVNEISKRRNRSIKT-VSCQKMKLYKKLNVKSDLTLWRDVFLRFKAY-LQP 89 LL + + Y + SI + + L +D ++R + Y Sbjct: 909 LLPLMRQPYDAGGYELHCSCSIGISIFPEDGLDKDTLLRNADTAMYRAKEVGRNNYHFYT 968 Query: 90 KNIICDNFNSSVLPVVSSKGESMAHYNIYYQPIYNAKNGNIAGCDVTIALKNSDGSAFAL 149 + + + KG ++YQP + G G + + ++ D + Sbjct: 969 EELNSRAMQRLSIETSLRKGIERNELLLHYQPKLDLHTGKPYGLEALLRWQHPDHGMISP 1028 Query: 150 DSDRINYNPNDNKVSYLFGHI----NKLFSPIKNNLPHGFFITININPEDILTCDIEREC 205 + I + + + + S + +++N++ + Sbjct: 1029 -MEFIPIAEETGLIIPIGKQVIRNACRQLSRWSSVGMSHICLSLNVSAVQFRDRRFVEDL 1087 Query: 206 LHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSLRRIRNNNVYLSLNDFGMGYAELSHLQ 265 + ++ G R+ L+ + + R + +++ S++DFG GY+ L++L Sbjct: 1088 VQLVREEGVSPHRIELELTETMLMEDAVRTIRVMETLKDEGFLFSIDDFGTGYSSLNYLH 1147 Query: 266 NIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSKQLHIDVIADGIETKKQAGYMIERGV 325 P + + ++ + I II L L + VIA+G+E + + + G Sbjct: 1148 RFPIDCLKIDRSFIRGMLERPADLAIIKAIIGLGHTLDMQVIAEGVEKEDEYRALRAAGC 1207 Query: 326 KYLKGIALSSPLPADAFVRKLLAS 349 ++G ++ PL + LLA Sbjct: 1208 DGIQGYFVARPLTPEQVPEWLLAR 1231 >UniRef50_Q1GXZ6 Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC and GAF sensor(S) n=2 Tax=Proteobacteria RepID=Q1GXZ6_METFK Length = 1238 Score = 333 bits (854), Expect = 7e-90, Method: Composition-based stats. Identities = 60/328 (18%), Positives = 137/328 (41%), Gaps = 20/328 (6%) Query: 32 LLSQLLKGYSVNEISKRRNRSIK-TVSCQKMKLY-KKLNVKSDLTLW------RDVFLRF 83 +L L + + ++ + SI + C + ++ +L ++DL ++ R+ F F Sbjct: 913 ILLALSQPFRLSGYEHYSSCSIGVALFCNEQQVTVDELLKRADLAMYEAKAAGRNTFRFF 972 Query: 84 KAYLQPKNIICDNFNSSVLPVVSSKGESMAHYNIYYQPIYNAKNGNIAGCDVTIALKNSD 143 +Q +I + + + +YYQP +++ G++ G + + ++ Sbjct: 973 DPAMQ--ALIT---KRAAMEEDLRQALRRDEMRLYYQPQVDSQ-GSLLGAEALVRWEHPQ 1026 Query: 144 GSAFALDSDRINYNPNDNKVSYLFGHINK-----LFSPIKNNLPHGFFITININPEDILT 198 + + I + + + + L + G +++N++ + Sbjct: 1027 QGLLSPAA-FIELAEETGLILPIGEWVLRTACMQLVAWAGRPETAGLVLSVNVSARQLHQ 1085 Query: 199 CDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSLRRIRNNNVYLSLNDFGMGY 258 D +K G L L+ + + I + + ++ V S++DFG GY Sbjct: 1086 HDFIDRVFSILKETGANPQSLKLELTESTLVENIEEMITKMNILKAMGVGFSMDDFGTGY 1145 Query: 259 AELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSKQLHIDVIADGIETKKQAG 318 + L++L+ +P S + + ++ D+ +S I TII L L I+V+A+G+E+ +Q Sbjct: 1146 SSLAYLKRLPLSQLKIDRSFVRDVLVDSNDASIVQTIIALGHGLGIEVVAEGVESWEQQQ 1205 Query: 319 YMIERGVKYLKGIALSSPLPADAFVRKL 346 ++ + G +G P PA+ R+ Sbjct: 1206 FLEKHGCLEYQGYLFGRPQPAEQLEREF 1233 >UniRef50_B9JLU1 Sensory box/GGDEF family protein n=1 Tax=Agrobacterium radiobacter K84 RepID=B9JLU1_AGRRK Length = 766 Score = 333 bits (854), Expect = 7e-90, Method: Composition-based stats. Identities = 61/322 (18%), Positives = 128/322 (39%), Gaps = 7/322 (2%) Query: 31 ELLSQLLKGYSVNEISKRRNRSIKTVS-CQKMKLYKKLNVKSDLTLWRDVFLRFKA-YLQ 88 + + + +N+I R SI S +L +D+ ++R L L Sbjct: 431 AIREAVTRPIVLNDIELRVTCSIGVASYPSHGSTAGELLASADMAMYRAKELGRDGIALF 490 Query: 89 PKNIICDNFNSSVLPVVSSKGESMAHYNIYYQPIYNAKNGNIAGCDVTIALKNSDGSAFA 148 + + + ++YQP + + G I + I +S Sbjct: 491 TSAMTAIVRKKLSRTDELRQALLRDEFVLHYQPQVDVRTGRIVAAEALIRWNHSSEG-LV 549 Query: 149 LDSDRINYNPNDNKVSYLFGHI----NKLFSPIKNNLPHGFFITININPEDILTCDIERE 204 D I + + + + + ++ I++N++ + Sbjct: 550 YPGDFIALAEETSLIVPIGEWVLKTACRQAKAWQDQGREPIRISVNVSARQFQEKRLIET 609 Query: 205 CLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSLRRIRNNNVYLSLNDFGMGYAELSHL 264 + G + I L L+ + + + + ++ + V L+++DFG GY+ LS L Sbjct: 610 VATALSESGLDPIWLELEITESLIMKDLAGSIARMQELETLGVKLAVDDFGTGYSSLSAL 669 Query: 265 QNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSKQLHIDVIADGIETKKQAGYMIERG 324 + P S + + ++ DI ++ I II L+++L ++VIA+G+ET++QA +++E G Sbjct: 670 KRFPLSRLKIDRSFIADIPHDADDMAITAAIISLAQKLGLEVIAEGVETEEQARFLVESG 729 Query: 325 VKYLKGIALSSPLPADAFVRKL 346 ++G S P+ F R L Sbjct: 730 CNEIQGYLFSRPVEEAQFNRML 751 >UniRef50_B0U8J8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=5 Tax=Rhizobiales RepID=B0U8J8_METS4 Length = 905 Score = 333 bits (854), Expect = 7e-90, Method: Composition-based stats. Identities = 56/336 (16%), Positives = 130/336 (38%), Gaps = 7/336 (2%) Query: 17 VNIEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIKTVSCQKMKLYKK-LNVKSDLTL 75 V E P + + +++ L + + + S+ + L +D+ L Sbjct: 570 VGAEQPRQAALLAERVVAVLQQPFEIQGQQVVIGASLGVATALSADPTPDALLRSADIAL 629 Query: 76 WRDVFL---RFKAYLQPKNIICDNFNSSVLPVVSSKGESMAHYNIYYQPIYNAKNGNIAG 132 ++ ++ + ++ + + + ++YQP+ A++ + G Sbjct: 630 YQAKAAGRGTWRFFDAEMDLEIQRRRRLAADLRRA--LDEGQFEVHYQPLVEARSRALRG 687 Query: 133 CDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINKLFSPIKNNLPHGFFITININ 192 + + ++ + + + + I + L + + P I +N++ Sbjct: 688 FEALLRWRHPEHGSVSP-AVFIPLAEETGLIRPLGAWVLAQACAEAASWPEPLKIAVNLS 746 Query: 193 PEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSLRRIRNNNVYLSLN 252 P + D+ E + G RL L+ + L + L +R +S++ Sbjct: 747 PVQFVQGDLVAEVRRVLAETGLGPGRLELEITESVLLQDNEVTLAVLHELRTLGALISMD 806 Query: 253 DFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSKQLHIDVIADGIE 312 DFG GY+ LS+L++ PF + + ++ ++ + + I +I L + L + V+A+G+E Sbjct: 807 DFGTGYSSLSYLRSFPFDKIKIDQSFVRNLARETDSVEIVRAVIGLGRALGMGVLAEGVE 866 Query: 313 TKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLLA 348 T +Q + + G L+G S P P A Sbjct: 867 TTEQLDILRQEGCDELQGYLFSRPRPVTEIRSLFNA 902 >UniRef50_C6NZZ7 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=2 Tax=Bacteria RepID=C6NZZ7_9PROT Length = 1152 Score = 333 bits (854), Expect = 7e-90, Method: Composition-based stats. Identities = 69/347 (19%), Positives = 135/347 (38%), Gaps = 19/347 (5%) Query: 19 IEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIK-TVSCQKMKLYKKLNVKSDLTLWR 77 +E I ++L L + Y + R + SI T+ K + ++L ++D+ +++ Sbjct: 807 LEAAAQTESIGEKILLTLNQPYLLAAHEYRNSPSIGATLFGNKPQSIEELLKQADIAMYQ 866 Query: 78 DVFL------RFKAYLQPKNIICDNFNSSVLPVVSSKGESMAHYNIYYQPIYNAKNGNIA 131 F +Q I ++L SK + +YYQ I Sbjct: 867 AKKAGRNTLRFFDPQMQETVI-----ARALLERELSKALENDQFQLYYQ-IQMTDLNEPF 920 Query: 132 GCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINKLFS-----PIKNNLPHGFF 186 G + I + + + I + + + KN Sbjct: 921 GAEALIRWIHPERGLI-PPNHFIPLAEEVGLILPIGLWVLDTACNQIKIWEKNASTRELV 979 Query: 187 ITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSLRRIRNNN 246 + +N++ D + ++ RL L+ + L I + + ++ Sbjct: 980 LAVNVSARSFFQDDFVTQIQTVLQRHAINPKRLKLEITESMMLNSIEQTIEKMNALKKLG 1039 Query: 247 VYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSKQLHIDV 306 V +++DFG GY+ L +L+ +P + + ++ DI ++S I TTI+ ++ L++DV Sbjct: 1040 VQFAMDDFGTGYSSLQYLKRLPLDQLKIDQSFVRDIATDSSDKAIVTTIVAMAHSLNLDV 1099 Query: 307 IADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLLASLKQV 353 IA+G+ET++Q +IE G +G P P F L L+Q Sbjct: 1100 IAEGVETEQQRQLLIESGCSQYQGYLFGKPAPIRQFEESLKPGLRQA 1146 >UniRef50_B8HWB1 Diguanylate cyclase/phosphodiesterase with FHA and GAF sensor n=2 Tax=Cyanothece sp. PCC 7425 RepID=B8HWB1_CYAP4 Length = 884 Score = 333 bits (854), Expect = 7e-90, Method: Composition-based stats. Identities = 62/339 (18%), Positives = 133/339 (39%), Gaps = 15/339 (4%) Query: 25 LSEIEIELLSQLLKGYSVNEISKRRNRSIKT-VSCQKMKLYKKLNVKSDLTLWRDVFLRF 83 +++ +LS L + + + SI + + L +D+ L++ L Sbjct: 544 VAKTAQRMLSALEQPFHLENHELYITPSIGIAIYDLDGHDGETLIKHADMALYQAKQLGR 603 Query: 84 KAYLQPKNIICDNFNSSV-----LPVVSSKGESMAHYNIYYQPIYNAKNGNIAGCDVTIA 138 Y C ++ L + +YYQP N K G I G + + Sbjct: 604 NTY----QFFCSGLSNGAPERLNLEKSLRHALERQEFLLYYQPQVNIKTGKITGMEALLR 659 Query: 139 LKNSDGSAFALDSDRINYNPNDNKVSYLFGHINKLFSP----IKNNLPHGFFITININPE 194 K+ + ++ + + + + ++ I +N++ Sbjct: 660 WKHPEMGLVIP-QLFMSVAEESGLIVAIGEWVLRTACAQNKTWQDQGLPPICIAVNLSAR 718 Query: 195 DILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSLRRIRNNNVYLSLNDF 254 D+ + G L L+ + + I + L+ +++ + +S++DF Sbjct: 719 QFRQPDLTGMIARILDETGLPPQYLDLEITETTAIQDIEFTKRVLQELQDMGIQISMDDF 778 Query: 255 GMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSKQLHIDVIADGIETK 314 G GY+ L+HLQ P + + + ++ D+ +NS I T +I L++ L+++V+A+G+E Sbjct: 779 GTGYSSLAHLQQFPLNTLKIDRSFVRDVAANSRDAQIVTAVIGLARGLNLNVVAEGVEND 838 Query: 315 KQAGYMIERGVKYLKGIALSSPLPADAFVRKLLASLKQV 353 +Q + + +G + PL ADA L + Q+ Sbjct: 839 EQLNCLESLHCEEAQGYIFNRPLEADAATEILQLNSFQL 877 >UniRef50_Q609J7 Sensory box protein n=1 Tax=Methylococcus capsulatus RepID=Q609J7_METCA Length = 712 Score = 333 bits (854), Expect = 8e-90, Method: Composition-based stats. Identities = 57/325 (17%), Positives = 125/325 (38%), Gaps = 7/325 (2%) Query: 28 IEIELLSQLLKGYSVNEISKRRNRSIKT-VSCQKMKLYKKLNVKSDLTLWRDVFLRFKAY 86 + +L L + Y+V + SI + + L +D ++ + Sbjct: 382 MAERILESLCRPYTVEDYQLHSGASIGIAIYPADGNSAETLMKHADAAMYHAKSRGRNTF 441 Query: 87 LQPKNIICDNFNSSV-LPVVSSKGESMAHYNIYYQPIYNAKNGNIAGCDVTIALKNSDGS 145 I + + + ++YQP + G+I + + ++ Sbjct: 442 EFFSQAINRGVRERLDIENGLRDALKHGGFKLHYQPQIDLTTGSICSVEALLRWRHPLLG 501 Query: 146 AFALDSDRINYNPNDNKVS----YLFGHINKLFSPIKNNLPHGFFITININPEDILTCDI 201 A D I + ++ +N+ G + +N++ + + Sbjct: 502 VIAPD-RFIPIAEETKLILPLGLWVIDRACHQLRAWRNDGIAGVRMAVNVSVKQLQDESF 560 Query: 202 ERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSLRRIRNNNVYLSLNDFGMGYAEL 261 ++ G + L+ + + + R Q+ L+ +++ + LS++DFG GY+ L Sbjct: 561 FEALGSIVERHGLSGSDIELEITESAIMENLSRVQALLKSLQDYGITLSIDDFGTGYSSL 620 Query: 262 SHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSKQLHIDVIADGIETKKQAGYMI 321 L+ +P + + ++ HDIE++ I II L L + +IA+G+ET Q + Sbjct: 621 GRLKLLPIQSLKIDRSFVHDIETDHGNAKICDGIIALGHSLGLKIIAEGVETDAQKNLLQ 680 Query: 322 ERGVKYLKGIALSSPLPADAFVRKL 346 G ++G ++ PLPAD + + Sbjct: 681 NSGCDAIQGFLIAKPLPADDVAKLI 705 >UniRef50_C5V2W0 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V2W0_9PROT Length = 1275 Score = 332 bits (853), Expect = 8e-90, Method: Composition-based stats. Identities = 61/337 (18%), Positives = 131/337 (38%), Gaps = 18/337 (5%) Query: 25 LSEIEIELLSQLLKGYSVNEISKRRNRSIK-TVSCQKMKLYKKLNVKSDLTL-------W 76 ++ + ++ + +V + S + + + +V L +D L Sbjct: 808 INRTAELIAQKIYQPLTVADQSVQLSARMGISVYPIDGNDATTLMKHADAALADAKQCGV 867 Query: 77 RDVFLRFKAYLQPKNIICDNFNSSVLPVVSSKGESMAHYNIYYQPIYNAKNGNIAGCDVT 136 R+ F + + + S ++YQP + G I G + Sbjct: 868 RNSFRFYSSSMNEHAHKLLTM-----GAELRNAISQNRLVLHYQPQVDIITGQIIGAEAL 922 Query: 137 IALKNSDGSAFALDSDRINYNPNDNKV----SYLFGHINKLFSPIKNNLPHGFFITININ 192 I + + + + + I+ + +++ + + I IN++ Sbjct: 923 IRINHPERGIISP-GEFISVAEETGLIIPMGTWVIREACRQMQQWHLDKNIELTIAINLS 981 Query: 193 PEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSLRRIRNNNVYLSLN 252 P + D+ + G L L+F+ + +R + + + + ++LS++ Sbjct: 982 PLQLHQSDLPEIVSLALHDSGLNARYLELEFTESAIMKNVRETVAIMNKFKAMGLHLSID 1041 Query: 253 DFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSKQLHIDVIADGIE 312 DFG GY+ LS+L+ P + + ++ +I + I II L + L + IA+G+E Sbjct: 1042 DFGTGYSSLSYLKQFPVDKLKIDQSFVSNITQDPNDAAIVQAIIALGRTLGMTTIAEGVE 1101 Query: 313 TKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLLAS 349 T+ Q GY+ K ++G S+PLPA+ F L+ Sbjct: 1102 TEAQLGYLRSVNCKEMQGYLYSAPLPAEEFAALLVRG 1138 >UniRef50_C6XBI7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6XBI7_METSD Length = 681 Score = 332 bits (853), Expect = 9e-90, Method: Composition-based stats. Identities = 61/347 (17%), Positives = 133/347 (38%), Gaps = 8/347 (2%) Query: 7 KLNLIDYDSIVN-IEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIKTV-SCQKMKLY 64 +L ++ +V+ + P ++ + ++L + + V+ S+ + Sbjct: 335 RLGGDEFGILVSEMRVPENITRVADKVLQAFDQPFVVDGHDVFVTASLGIAAYPSDSQAV 394 Query: 65 KKLNVKSDLTLWRDVFLRFK-AYLQPKNIICDNFNSSVLPVVSSKGESMAHYNIYYQPIY 123 L +D L+ L ++ + + ++YQP+ Sbjct: 395 DDLLKYADSALFHAKHLGRNNFQFYSADLTIKAAERREVETNLRFALKKEEFLLHYQPLV 454 Query: 124 NAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINKLFSPIKNNL-- 181 + I G + + ++ G D I + + + + + L Sbjct: 455 DLATREIIGAEALLRWQHESGKLIMPD-KFIGIAEETGLIIPIGEWVMRSACQVAVALNR 513 Query: 182 --PHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSL 239 P + +N++ L D+ + G + L+ + L Q L Sbjct: 514 GRPRPVTVAVNLSTRQFLHNDLVSSIQAILAETGCHTDWIKLEITESLLLENTDNIQRML 573 Query: 240 RRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLS 299 + + + +S++DFG GY+ LS+L P + + ++ DI N+ +I I+ L+ Sbjct: 574 QSLSAMGLCISIDDFGTGYSALSYLHRFPVRELKIDRSFTSDITDNAERALIVQAIVSLA 633 Query: 300 KQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKL 346 + L+ +V+A+G+ET +QA Y+ + G +G S PLP + F+ L Sbjct: 634 RNLNKNVVAEGVETLEQADYLHKMGCPQAQGYLFSKPLPLEQFLALL 680 >UniRef50_Q0KC83 Predicted signal transduction protein containingCHASE, PAS, GGDEF and EAL domains n=3 Tax=cellular organisms RepID=Q0KC83_RALEH Length = 1124 Score = 332 bits (853), Expect = 9e-90, Method: Composition-based stats. Identities = 56/325 (17%), Positives = 123/325 (37%), Gaps = 11/325 (3%) Query: 34 SQLLKGYSVNEISKRRNRSIKTVS-CQKMKLYKKLNVKSDLTLWRD---VFLRFKAYLQP 89 + L G+ VNE R SI S + ++ L +DL ++ ++ Y + Sbjct: 788 AALAPGFVVNESELRMTASIGISSFPEDGSDWQTLLKHADLAMYGAKQLGKNGYQFYCRG 847 Query: 90 KNIICDNFNSSVLPVVSSKGESMAHYNIYYQPIYNAKNGNIAGCDVTIALKNSDGSAFAL 149 + + + + +YYQP +G + I ++ + + Sbjct: 848 MSASLQ--RRIDMESHLHRALEQDEFILYYQPRIALASGACTAVEALIRWRHPELG-LVM 904 Query: 150 DSDRINYNPNDNKVSYLFGHI----NKLFSPIKNNLPHGFFITININPEDILTCDIEREC 205 D I + + + + + + +++N++ + Sbjct: 905 PGDFIPFAEQSGAIVEIGAWALREACRQNAAWRAQGLPPVRVSVNLSARQFADKSLRLTI 964 Query: 206 LHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSLRRIRNNNVYLSLNDFGMGYAELSHLQ 265 + ++ G L L+ + + + S L R++ V L+++DFG GY+ L++L Sbjct: 965 IDALRQAGLPGNLLELELTESMVMRDAEQASSWLSRLKRTGVRLAIDDFGTGYSSLAYLS 1024 Query: 266 NIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSKQLHIDVIADGIETKKQAGYMIERGV 325 P V + + I + I + +I L +L ++V+A+G+E + Q ++ G Sbjct: 1025 RFPIDTVKIDGSFVRYIPESRSDTQITSAVIGLGHRLGLEVVAEGVENEVQLEFLRREGC 1084 Query: 326 KYLKGIALSSPLPADAFVRKLLASL 350 ++G S PLP L + + Sbjct: 1085 DEVQGYYFSHPLPPAKITAFLASRM 1109 >UniRef50_Q2Y6N3 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=1 Tax=Nitrosospira multiformis ATCC 25196 RepID=Q2Y6N3_NITMU Length = 1025 Score = 332 bits (853), Expect = 1e-89, Method: Composition-based stats. Identities = 53/341 (15%), Positives = 133/341 (39%), Gaps = 17/341 (4%) Query: 22 PCLLSEIEIELLSQLLKGYSVNEISKRRNRSIK-TVSCQKMKLYKKLNVKSDLTLWRD-- 78 P + I +++S L + + + S+ ++ L +D +++ Sbjct: 680 PEDATLIAEKVISALQVPFELETQEIYVSASLGISIYPGDGTDADSLLRNADTAMFQAKE 739 Query: 79 ----VFLRFKAYLQPKNIICDNFNSSVLPVVSSKGESMAHYNIYYQPIYNAKNGNIAGCD 134 ++ + + + + + + + ++YQP + NG I G + Sbjct: 740 QGPAIYQFYLPQMNERAV-----ARLKIETQLRGALARREFVLHYQPKASLINGEITGFE 794 Query: 135 VTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINK-LFSPIKNNLPHGFF---ITIN 190 + ++ I+ + + + + K + I+ G I IN Sbjct: 795 ALLRWQHPAHG-LVPPLQFISVLEDTGLIVAVGEWVVKTVCEQIREWQGQGLVLHPIAIN 853 Query: 191 INPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSLRRIRNNNVYLS 250 ++ D++ ++ + L + + + ++L+ ++ V +S Sbjct: 854 LSARQFQQQDLDSIIGETLRATNIDPRLLEFELTESVLMKEAEMAANALQNLKAFGVQIS 913 Query: 251 LNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSKQLHIDVIADG 310 ++DFG GY+ L++L+ P + + + D+ ++ I +I L+ L + V+A+G Sbjct: 914 MDDFGTGYSSLAYLKRFPLDVLKIDRAFIRDVTTDPDDATITVAMIKLAHSLGLKVVAEG 973 Query: 311 IETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLLASLK 351 +ET+ Q ++I G ++G S PLP + + L+ + Sbjct: 974 VETRAQLEFLIRHGCDEMQGYYFSQPLPLEGASKVLMGGYR 1014 >UniRef50_C6X9G9 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6X9G9_METSD Length = 984 Score = 332 bits (853), Expect = 1e-89, Method: Composition-based stats. Identities = 63/319 (19%), Positives = 130/319 (40%), Gaps = 14/319 (4%) Query: 43 NEISKRRNRSIKTVSCQKMKLYKKLNVKSDLTLWRDVFLRFKAYLQPKNIIC-------- 94 NE R + + + +Y ++ D + ++ + KN C Sbjct: 662 NEFLIDG-RELFISASVGISVYPDDSLDVDGLIKAADIAMYQVKNKGKNNHCFYSADLSQ 720 Query: 95 DNFNSSVLPVVSSKGESMAHYNIYYQPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRI 154 + L + + + +YYQ + + G I G + I + + + + I Sbjct: 721 NAVERFTLENQLRRALARDQFEVYYQAQVSLETGRIIGAESLIRWIHPELGVVSP-AKFI 779 Query: 155 NYNPNDNKVSYLFGHINKLFS-PIKNNLPHGF---FITININPEDILTCDIERECLHFIK 210 + + + + + +K GF ++++N++ I + + Sbjct: 780 PLAEETGLIIPIGEWVLRQSAMQVKEWHDQGFDIDWVSVNVSGVQIQRSNFADTVYGILV 839 Query: 211 VFGTERIRLVLQFSTKEELYIIRRYQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFS 270 E L L+ + ++ RI++ V L+++DFG GY+ LSHL+ +P Sbjct: 840 ETDCESHLLELEITESTVMHNTEYVIDVFDRIKHLGVRLAIDDFGTGYSSLSHLKRLPLD 899 Query: 271 YVNLHKTMFHDIESNSLTDIIATTIIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKG 330 + + ++ D+ +NS IAT I +++ L VIA+G+ET++QA ++ + G + +G Sbjct: 900 KIKIDQSFVRDLPNNSDDAAIATAINAMAQSLGFTVIAEGVETRQQASFLKKIGCQQGQG 959 Query: 331 IALSSPLPADAFVRKLLAS 349 S P+ A F L A Sbjct: 960 YLYSRPVTASEFTALLRAE 978 >UniRef50_B1M8T6 Diguanylate cyclase/phosphodiesterase n=1 Tax=Methylobacterium radiotolerans JCM 2831 RepID=B1M8T6_METRJ Length = 776 Score = 332 bits (852), Expect = 1e-89, Method: Composition-based stats. Identities = 59/335 (17%), Positives = 130/335 (38%), Gaps = 13/335 (3%) Query: 22 PCLLSEIEIELLSQLLKGYSVNEISKRRNRSIKT-VSCQKMKLYKKLNVKSDLTLW---- 76 P + ++ +L +L + + ++ SI ++ +L +D+ L+ Sbjct: 440 PAVAEDLARRVLQELERPFDIDGTHVTVGASIGIAIAPFHANDEDRLLKCADIALYAIKG 499 Query: 77 --RDVFLRFKAYLQPKNIICDNFNSSVLPVVSSKGESMAHYNIYYQPIYNAKNGNIAGCD 134 R F F+ + L + ++YQPI ++ G I C+ Sbjct: 500 AGRSGFKIFQ-----HEMEAATRARHALESDLRAALTNGELELHYQPIVDSSTGAIVSCE 554 Query: 135 VTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINKLFSPIKNNLPHGFFITININPE 194 + + S + SD I + + L + P + +N++P Sbjct: 555 ALLRWHHP-VSGYIPPSDFIPVAEDTGLIVQLGNWVLNEACREARKWPSTVSVAVNMSPR 613 Query: 195 DILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSLRRIRNNNVYLSLNDF 254 + + + G RL L+ + L + ++ ++R + LS++DF Sbjct: 614 QFGDPQLAFHVIGALNRSGLPAHRLELEITESVTLGATHKIVETINKLRQLGIRLSIDDF 673 Query: 255 GMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSKQLHIDVIADGIETK 314 G GY+ LS L+N F + + ++ D++ + + I I+ + + + + ++ +G+ET+ Sbjct: 674 GTGYSSLSSLRNFAFDKLKIDRSFVSDLDRKAESTAIIRAIVGMGRSIGMAIVVEGVETE 733 Query: 315 KQAGYMIERGVKYLKGIALSSPLPADAFVRKLLAS 349 Q + G ++G S P+ A L A+ Sbjct: 734 TQLSILRTEGCDLIQGYVFSRPVAAPQIRTMLAAA 768 >UniRef50_Q47BF2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q47BF2_DECAR Length = 1038 Score = 332 bits (852), Expect = 1e-89, Method: Composition-based stats. Identities = 69/351 (19%), Positives = 138/351 (39%), Gaps = 21/351 (5%) Query: 5 KIKLNLIDYDSIVNIEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIKTVSCQKM-KL 63 + + L + ++ + + I ++L L++ Y E S SI + + Sbjct: 685 EFVILLEELSPNIH-DATTQIEHIAQKMLDSLVQPYKFGEFSHHCTASIGAIPFMDATET 743 Query: 64 YKKLNVKSDLTLWRDV------FLRFKAYLQPKNIICDNFNSSVLPVVSSKGESMAHYNI 117 + L +D+ +++ F +Q + + L + + + + Sbjct: 744 IESLLKSADMAMYKAKAAGKNRLFFFDPAMQ-----TEVEARAALERDLRQAQREKQFVL 798 Query: 118 YYQPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINKLFS-- 175 Y QP + ++G+++G + I ++ L + + + + + + Sbjct: 799 YLQPQVD-QSGHVSGAEALIRWQHPTHGLI-LPGEFTHVAEETRLILPIGQWVLEEACKQ 856 Query: 176 ---PIKNNLPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYII 232 KN + IN++ D + I G RL L+ + L I Sbjct: 857 LVIWQKNPDTAHLTLAINVSALQFRNPDFVDDVARAIHESGALASRLKLEITESLLLEDI 916 Query: 233 RRYQSSLRRIR-NNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDII 291 ++ ++ V LSL+DFG GY+ LS+L+ +P + + ++ DI N I Sbjct: 917 DGTIERMQVLKNQLGVGLSLDDFGTGYSSLSYLKQLPLDQIKIDRSFVKDIHCNPNDAAI 976 Query: 292 ATTIIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAF 342 A +I L + ++VIA+G+ET +Q +I RG +G P P DAF Sbjct: 977 AEAVIALGRSFSLNVIAEGVETIEQRDALIARGCLTFQGYLFGRPGPIDAF 1027 >UniRef50_C6MBX5 Diguanylate cyclase/phosphodiesterase n=1 Tax=Nitrosomonas sp. AL212 RepID=C6MBX5_9PROT Length = 891 Score = 332 bits (852), Expect = 1e-89, Method: Composition-based stats. Identities = 57/332 (17%), Positives = 137/332 (41%), Gaps = 7/332 (2%) Query: 27 EIEIELLSQLLKGYSVNEISKRRNRSIKTVSCQKMKL-YKKLNVKSDLTLWRDVFLRFKA 85 ++ ++L + +++ + SI + + L SD+ ++ Sbjct: 550 KVAQKILDSFALPFHIHKNELHIDGSIGIAVFPDDGVNAETLLKNSDVAMYHAKKNGRNN 609 Query: 86 YLQPKNIICDN-FNSSVLPVVSSKGESMAHYNIYYQPIYNAKNGNIAGCDVTIALKNSDG 144 Y + + + + +L + +YYQP+ + + N+ G + + ++ + Sbjct: 610 YQFFTDELNKSAYERHILGLDLRYALERNELLLYYQPVMDMPSHNLYGVEALLRWRHPEQ 669 Query: 145 SAFALDSDRINYNPNDNKVSYLFGHINKLFS-PIKNNLPHGFFI---TININPEDILTCD 200 D IN + + + + IK GF++ IN++ D Sbjct: 670 KLITPD-KFINLAEETGLIIPIGEWVIRTVCLQIKAWQEQGFYVPRVAINLSARQFRDKD 728 Query: 201 IERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSLRRIRNNNVYLSLNDFGMGYAE 260 + + + G + + L+ + + I + +L R+ +++S++DFG GY+ Sbjct: 729 LIKNISRILSETGVKAKHIALEITESMLIDNIEKVVETLNRLDAMGLHISIDDFGTGYSS 788 Query: 261 LSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSKQLHIDVIADGIETKKQAGYM 320 LS+L+ P + + ++ D+ ++ I II ++ L ++VIA+GIE ++Q ++ Sbjct: 789 LSYLKQFPIHTLKIDRSFVRDLVTDKNDRTIVAAIIAMAHSLEMEVIAEGIEIEEQLDFL 848 Query: 321 IERGVKYLKGIALSSPLPADAFVRKLLASLKQ 352 + + + +G S P+ L+ S+ Q Sbjct: 849 VTQKCNHYQGYYFSKPVTVSEIELMLMNSVTQ 880 >UniRef50_C1DJP1 Cyclic di-GMP signal transduction protein n=1 Tax=Azotobacter vinelandii DJ RepID=C1DJP1_AZOVD Length = 1104 Score = 332 bits (852), Expect = 1e-89, Method: Composition-based stats. Identities = 60/340 (17%), Positives = 143/340 (42%), Gaps = 7/340 (2%) Query: 16 IVNIEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIK-TVSCQKMKLYKKLNVKSDLT 74 + ++E P + +++ L V E + SI ++ + + +L +D+ Sbjct: 762 LADLEQPADADAVARKIVGSLDCPIVVQERKIHLSGSIGVSLFPRDGETADELIDNADMA 821 Query: 75 LWRDVFLRFKAYLQP-KNIICDNFNSSVLPVVSSKGESMAHYNIYYQPIYNAKNGNIAGC 133 ++R L Y + + + L + + + YQP + +NG I+GC Sbjct: 822 MYRAKELGRNTYQFFTRAMSLETQRRVDLEIKLRGAATAGQLQLVYQPKVSLENGGISGC 881 Query: 134 DVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINKLFS-PIKNNLPHGFF---ITI 189 + + + + + + I + + + + + + + G + + Sbjct: 882 EALLRWHHPELGIVSPE-HFIPIAEDSGLIVPIGDWVLRTACMQARAWMDAGLPPVCVAV 940 Query: 190 NINPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSLRRIRNNNVYL 249 N++ L D+ ++ G RL L+ + I + +++ ++++ V L Sbjct: 941 NVSTRQFLQQDVVAWVTRTLRETGLPAARLELELTESLIARDIEKVTATIDQLKDIGVKL 1000 Query: 250 SLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSKQLHIDVIAD 309 S++DFG GY+ L++L+ + + ++ ++ + + I +I L+ L VIA+ Sbjct: 1001 SIDDFGTGYSSLNYLKRFRVDTLKIDQSFVRNMLTEMEDETIVLAVIALAHNLKFKVIAE 1060 Query: 310 GIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLLAS 349 G+ET++ + ++ G ++G S P+ A+AF L A Sbjct: 1061 GVETEQHSRFLCSNGCDEIQGHYFSEPVTAEAFETMLRAG 1100 >UniRef50_B9YZY8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Lutiella nitroferrum 2002 RepID=B9YZY8_9NEIS Length = 718 Score = 332 bits (852), Expect = 1e-89, Method: Composition-based stats. Identities = 64/348 (18%), Positives = 134/348 (38%), Gaps = 27/348 (7%) Query: 18 NIEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIK-TVSCQKMKLYKKLNVKSDLTLW 76 N+ P + ++ ++ L K + + + SI T+ + + L + +D + Sbjct: 374 NLSQPTPIEQVAQSIIETLSKPFQLGPDVAYVSASIGVTLYPKDAQDMDTLLINADQAM- 432 Query: 77 RDVFLRFKAYLQPKNIICDNF--------NSSVLPVVSSKGESMAHYNIYYQPIYNAKNG 128 + A KN C L + ++YYQPI + G Sbjct: 433 ------YHAKALGKNRFCYFVPSIQAIFAERLQLGHDLRSAMAQGQLDVYYQPIVDLATG 486 Query: 129 NIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINKLFSPIKNNLPHG---- 184 +I + + + + + I + ++ + + + + + L Sbjct: 487 HIVKAEALVRWHHPRRGWISP-AQFIPIAEDIGLINGIGDWVFRRAAGMAKRLWESGCSG 545 Query: 185 ------FFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSS 238 I+IN +P T + ++ G + ++ + L S Sbjct: 546 TPAGAPLQISINKSPRQFFTGHAHETWIDHLQEIGLPAECIAIEITEGLLLDERPDVTSK 605 Query: 239 LRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDL 298 L++ R V +SL+DFG GY+ +++L+ + Y+ + ++ D+ S I II + Sbjct: 606 LQQFRRAGVQVSLDDFGTGYSAMAYLKRLDIDYLKIDQSFVRDMTSTPSDRAITEAIIAM 665 Query: 299 SKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKL 346 S +L + V+A+G+ET++Q + G + +G S LP D F + L Sbjct: 666 SHKLGLRVVAEGVETREQRDLLSAAGCDFGQGYWFSRALPEDEFFKLL 713 >UniRef50_C3X2S2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Oxalobacter formigenes RepID=C3X2S2_OXAFO Length = 1049 Score = 332 bits (852), Expect = 1e-89, Method: Composition-based stats. Identities = 56/338 (16%), Positives = 133/338 (39%), Gaps = 21/338 (6%) Query: 19 IEFPCLLSE----IEIELLSQLLKGYSVNEISKRRNRSIKT-VSCQKMKLYKKLNVKSDL 73 + P ++ + LL+ + Y++ SI + + L +D Sbjct: 704 LVLPGTDTDGAAYLAERLLNIAARQYNIERHEINLTVSIGIAMYPTDGTDFDTLWRSADA 763 Query: 74 TLWRD------VFLRFKAYLQPKNIICDNFNSSVLPVVSSKGESMAHYNIYYQPIYNAKN 127 ++R + F +Q ++ + + + +++ YQP + Sbjct: 764 AMYRAKQSGRNDYCFFTTEMQARSA-----RTLQIDNALRRALERNQFSLVYQPQLSLNT 818 Query: 128 GNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINK----LFSPIKNNLPH 183 I G + I + D + I ++ ++ + + K ++N Sbjct: 819 NRIVGFEALIRWTHPQFGNTPPD-EFIPIAESNGQIIPIGEWVLKTAVRQLRLWQDNGLK 877 Query: 184 GFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSLRRIR 243 I++N++ + + ++ G L L+ + + + + +R Sbjct: 878 DVTISVNLSAVQFRHPRLPELVMAILEEAGVSPECLQLELTEGVAMENPLAAITVIDELR 937 Query: 244 NNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSKQLH 303 + +S++DFG GY+ L++L+ + + ++ D+ +++ I + +I L+ L Sbjct: 938 KKGIRISIDDFGTGYSSLTYLKRFNVYSLKIDRSFVQDLPNDTEDMAIVSAVISLADSLG 997 Query: 304 IDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADA 341 + +A+G+ETK+Q ++ RG ++G LS PL ADA Sbjct: 998 MITVAEGVETKEQLEFLRSRGCTEIQGYYLSRPLQADA 1035 >UniRef50_A0L2H7 Diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(S) n=12 Tax=Bacteria RepID=A0L2H7_SHESA Length = 1228 Score = 332 bits (852), Expect = 1e-89, Method: Composition-based stats. Identities = 58/328 (17%), Positives = 133/328 (40%), Gaps = 7/328 (2%) Query: 25 LSEIEIELLSQLLKGYSVNEISKRRNRSIKT-VSCQKMKLYKKLNVKSDLTLWRDVFLRF 83 ++++ L S L + Y ++ + SI + + L +D+ ++R Sbjct: 898 VAKVAEALRSGLNQTYLIDNKPLHSSPSIGISLFPTDGDSVEALMKNADMAMYRAKAAGR 957 Query: 84 KAYLQPKNIICDNFNS-SVLPVVSSKGESMAHYNIYYQPIYNAKNGNIAGCDVTIALKNS 142 Y + + + + +YYQP + +G + G + I ++ Sbjct: 958 NNYQFFTAAMNTLVTERQQIETGLRQAIACNELLLYYQPQVDISSGQVVGVEALIRWQHP 1017 Query: 143 DGSAFALDSDRINYNPNDNKVSYLFGHINK----LFSPIKNNLPHGFFITININPEDILT 198 + A D I + + + + + + ++ G + +N++ + Sbjct: 1018 ELGLVAPD-RFIPIAEEIDMIIPIGQWVLENALAQLAEWRDKGAKGLRMAVNLSAHQLRK 1076 Query: 199 CDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSLRRIRNNNVYLSLNDFGMGY 258 I + ++ + + L L+ + + + L +R + + L+++DFG GY Sbjct: 1077 DTIVADIINVLTKHKLGKGALELEITESVAMQYPEQNAKLLAELRQHGIELAIDDFGTGY 1136 Query: 259 AELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSKQLHIDVIADGIETKKQAG 318 + LS+L+ +P + L ++ DIES+ I+ I ++ +L + V+A+G+E + Q Sbjct: 1137 SSLSYLKLLPLDRLKLDRSFVKDIESDPNDAAISAATISMAHELGLTVVAEGVENEAQLV 1196 Query: 319 YMIERGVKYLKGIALSSPLPADAFVRKL 346 + G ++G S PL AD R + Sbjct: 1197 LLSGMGCDLVQGYYFSKPLAADDCFRFI 1224 >UniRef50_A6WTB4 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=20 Tax=Shewanella RepID=A6WTB4_SHEB8 Length = 1497 Score = 332 bits (852), Expect = 1e-89, Method: Composition-based stats. Identities = 57/329 (17%), Positives = 125/329 (37%), Gaps = 8/329 (2%) Query: 25 LSEIEIELLSQLLKGYSVNEISKRRNRSIKTVSCQKMKLYKKL-NVKSDLTLWRDVFLRF 83 ++ I LL Q++ + + + SI + + +DL ++ Sbjct: 1159 INHIAERLLEQIVAPFKLYGREFYISTSIGISIWPDDAVQPEAFIKNADLAMYHAKEEGR 1218 Query: 84 -KAYLQPKNIICDNFNSSVLPVVSSKGESMAHYNIYYQPIYN-AKNGNIAGCDVTIALKN 141 L K + +YYQP + +N + G + I K+ Sbjct: 1219 GNFQYYSSERNAQALYHLRLEADLRKAIERQEFELYYQPQIDILRNDKLIGMEALIRWKH 1278 Query: 142 SDGSAFALDSDRINYNPNDNKVSYLFGHINKLFS----PIKNNLPHGFFITININPEDIL 197 D I + + + + F +++NI+ Sbjct: 1279 PLDGFIRPDI-FIKVAEACGLIVDIDRWVLRQACVQGAHWAKRYGSTFKLSVNISAVHFR 1337 Query: 198 TCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSLRRIRNNNVYLSLNDFGMG 257 D + + L L+ + + + + L R+++ + ++++DFG G Sbjct: 1338 QPDFIEDIQSILHETQMPTASLGLEITEGVLMKELHVAKDHLSRLKSLGIEVAIDDFGTG 1397 Query: 258 YAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSKQLHIDVIADGIETKKQA 317 Y+ L++L++ + + + ++ DI +N I ++II+L++ L ++V+A+GIET +Q Sbjct: 1398 YSSLAYLRHFEVNTLKIDRSFLIDIATNKADQAIVSSIIELARNLKLNVVAEGIETVEQL 1457 Query: 318 GYMIERGVKYLKGIALSSPLPADAFVRKL 346 + RG ++G + P+ F R L Sbjct: 1458 EQVFSRGCYIIQGYYFAKPMCVADFERYL 1486 >UniRef50_A4Y0Z3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=13 Tax=Pseudomonas RepID=A4Y0Z3_PSEMY Length = 960 Score = 332 bits (852), Expect = 1e-89, Method: Composition-based stats. Identities = 61/350 (17%), Positives = 131/350 (37%), Gaps = 13/350 (3%) Query: 5 KIKLNLIDYDSIVNIEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIKTVSCQK-MKL 63 + + L Y S+ L+ + LL++L V + S+ + Sbjct: 611 EFAILLDAYGSL------SSLARVASRLLAKLRLPMDVGGHELVVSASLGISLLPDYARE 664 Query: 64 YKKLNVKSDLTLWRDVFLRFK-AYLQPKNIICDNFNSSVLPVVSSKGESMAHYNIYYQPI 122 L ++++ + L N+ L K ++YQP Sbjct: 665 IGALISQANMAVQHAKHLGGNTFQFFTDNLQACTLERLQLENQLRKAIEEGQLEVFYQPK 724 Query: 123 YNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHI----NKLFSPIK 178 N + + + + ++ A + I ++ + + + + Sbjct: 725 LNLADDQLNAAEALVRWRHPQQGLVAP-GEFIGLAEETGLIAPIGEFVLRQACRQARQWQ 783 Query: 179 NNLPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSS 238 +++NI+ + ++ ++ G L L+ + + L + + Sbjct: 784 QQGLAEIRVSVNISVYQLRQGNLTSLVRQVLEETGLAPQYLELELTESQLLDNVDSVVVT 843 Query: 239 LRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDL 298 R++R V L+++DFG GY+ LS+L+ P YV + +T D+ I II + Sbjct: 844 FRQLRELGVKLAIDDFGTGYSSLSYLKRFPVHYVKIDQTFIRDLSPGGEDAAITRAIIAM 903 Query: 299 SKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLLA 348 + L + V+A+G+ET+ Q ++ + ++G +S P+ A AF L A Sbjct: 904 AHSLELKVVAEGVETQAQMDFLKSQNCDEIQGYLISRPVEAAAFAELLRA 953 >UniRef50_Q1H3Y9 Diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(S) n=1 Tax=Methylobacillus flagellatus KT RepID=Q1H3Y9_METFK Length = 858 Score = 332 bits (852), Expect = 1e-89, Method: Composition-based stats. Identities = 60/340 (17%), Positives = 135/340 (39%), Gaps = 17/340 (5%) Query: 25 LSEIEIELLSQLLKGYSVNEISKRRNRSIKTVS-CQKMKLYKKLNVKSDLTLW------R 77 + + E+L +L + Y + + SI L D ++ + Sbjct: 522 VGRVAKEVLQRLAQPYLIEGYELHSSSSIGIGVSPHDGSDPYSLLKNIDTAMYAAKSSGK 581 Query: 78 DVFLRFKAYLQPKNIICDNFNSSVLPVVSSKGESMAHYNIYYQPIYNAKNGNIAGCDVTI 137 + F F ++ + I + + + + ++YQP + G I G + + Sbjct: 582 NNFKFFTEKMREQ--INERM---QMENHLRQAILRNEFELHYQPQVDLGTGRIIGMEALV 636 Query: 138 ALKNSDGSAFALDSDRINYNPNDNKVSYLFGHI----NKLFSPIKNNLPHGFFITININP 193 + + + I N V L + + S I++NI+ Sbjct: 637 RWNHPEWGMVHPE-KFIRVAEECNLVIPLGEWVLCEACRQISQWSRQGLEAVCISVNISA 695 Query: 194 EDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSLRRIRNNNVYLSLND 253 + + + + + + L L+ + + + ++ ++N V L+++D Sbjct: 696 RQLKSRYLFTLIDNLMMTHQIKPGMLELEITESAVMDDPEQTIPRMKELKNKGVALAIDD 755 Query: 254 FGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSKQLHIDVIADGIET 313 FG GY+ LS+L+ +P + + + ++ DIE++ I I L++ L + ++A+G+ET Sbjct: 756 FGTGYSSLSYLKLLPLTRLKIDRSFVKDIETDPNDAAICAATIALARTLGLGLVAEGVET 815 Query: 314 KKQAGYMIERGVKYLKGIALSSPLPADAFVRKLLASLKQV 353 + Q Y+ +G +G S PLPA+ + + ++V Sbjct: 816 EAQLEYLRAQGCDSAQGYYFSKPLPANNIMAFVSRHQQEV 855 >UniRef50_D2LQL8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Bacillus cellulosilyticus DSM 2522 RepID=D2LQL8_BACS4 Length = 1016 Score = 332 bits (852), Expect = 1e-89, Method: Composition-based stats. Identities = 59/336 (17%), Positives = 133/336 (39%), Gaps = 7/336 (2%) Query: 16 IVNIEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIK-TVSCQKMKLYKKLNVKSDLT 74 + +I L ++ + + + + + SI +V + Y L +D+ Sbjct: 679 LTHITDVSDLQASANLIIEKFKEPFFIQNQDVFTSASIGISVYPDHGRDYDSLTGNADIA 738 Query: 75 LWRDVFLRFKA-YLQPKNIICDNFNSSVLPVVSSKGESMAHYNIYYQPIYNAKNGNIAGC 133 ++R + I + K + ++YQP ++ +N + G Sbjct: 739 MYRAKENGKNQMEMYSSEINTLTMERFQMENQLRKALEREEFVLHYQPQFHLENNEVLGI 798 Query: 134 DVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINK-LFSPIKNNLPHGFF---ITI 189 + + +SD + + I + + + K K + G +++ Sbjct: 799 EALLRWNSSDRGIVSP-MEFIPLAEETGLIIPIGYWVLKEACRQNKRWMDQGHRPKIVSV 857 Query: 190 NINPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSLRRIRNNNVYL 249 NI+ + D + ++ L L+ + + I + L+ + + + Sbjct: 858 NISARQLQEKDFVQAVKSILEDTQLPTQYLCLEITESTAIKNIDISMNMLKELGELGIKI 917 Query: 250 SLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSKQLHIDVIAD 309 +++DFG GY+ L+ L+ +P S + + K+ D++ + I II ++ L + V A+ Sbjct: 918 AIDDFGTGYSSLAMLKQLPISNIKIDKSFIRDMDVDKDDGAIVRAIIAMAHSLELTVTAE 977 Query: 310 GIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRK 345 G+ET+ Q +++ YL+G S PLPA+ +R Sbjct: 978 GVETEDQKNILLQEKCNYLQGYLYSKPLPAEECLRF 1013 >UniRef50_A1TLA7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Acidovorax RepID=A1TLA7_ACIAC Length = 850 Score = 332 bits (852), Expect = 1e-89, Method: Composition-based stats. Identities = 49/290 (16%), Positives = 120/290 (41%), Gaps = 8/290 (2%) Query: 67 LNVKSDLTLWRDVFLRFKA-YLQPKNIICDNFNSSVLPVVSSKGESMAHYNIYYQPIYNA 125 L +DL +++ +++ + L ++YQP+ N Sbjct: 563 LLKHADLAMYQAKAAGRNTIRFFDPSMLQAVLARAALESELRLALESDELLLHYQPLVN- 621 Query: 126 KNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHIN-----KLFSPIKNN 180 +G++ G + + ++ + + I + L + +L + ++ Sbjct: 622 GDGSMLGAEALVRWRHPQRG-LVMPGEFIPAAEQGGLIVALGQWVLERACAQLVAWSRSA 680 Query: 181 LPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSLR 240 + +N++ D + L ++ G + L ++ + + + + + Sbjct: 681 ATAQLVLAVNVSVRQFRQPDFVDQLLQTLRRSGAQPRLLKIELTESLLMADVEDVIARME 740 Query: 241 RIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSK 300 ++R + V +++DFG GY+ L++L+ +P + + ++ D+ ++ I TI+ L++ Sbjct: 741 QLRAHGVGFAIDDFGTGYSSLAYLKRLPLDQLKIDQSFVRDVLTDPNDAAIVRTILALAR 800 Query: 301 QLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLLASL 350 L ++V+A+G+ET Q ++ G K +G P PA R L +L Sbjct: 801 SLDLEVVAEGVETTGQLKFLQRHGCKAFQGHLFGRPAPAAVLERALRPAL 850 >UniRef50_Q60A84 Sensory box protein n=1 Tax=Methylococcus capsulatus RepID=Q60A84_METCA Length = 810 Score = 332 bits (851), Expect = 1e-89, Method: Composition-based stats. Identities = 63/335 (18%), Positives = 127/335 (37%), Gaps = 11/335 (3%) Query: 23 CLLSEIEIELLSQLLKGYSVNEISKRRNRSIKTVSCQKMK-LYKKLNVKSDLTLW---RD 78 L I +L + + + + SI V + + +L ++DL ++ R Sbjct: 478 GDLRAIAGRILEAFGEAFIIEGKELFVSVSIGIVLHMEGQCDADRLFKQADLAMYHAKRQ 537 Query: 79 VFLRFKAYLQPKNIICDNFNSSVLPVVSSKGESMAHYNIYYQPIYNAKNGNIAGCDVTIA 138 F+ Y + + + + + K +YYQP G I G + + Sbjct: 538 GRNNFQFYAEELAVQVSD--RTAMEGALRKALGNGELELYYQPQVALPAGRIVGAEALLR 595 Query: 139 LKNSDGSAFALDSDRINYNPNDNKVSYLFGHI----NKLFSPIKNNLPHGFFITININPE 194 ++ D I + L + + + F + +N++ Sbjct: 596 WRHPQEGIMTPD-RFIPIAEETGLIRDLGHWVLTTACRRAVYWHRTVDSPFKVAVNLSTR 654 Query: 195 DILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSLRRIRNNNVYLSLNDF 254 + D+ E ++ G L L+ + L ++L + + +S++DF Sbjct: 655 QFVRNDLPGELQRIVQDTGCRPEWLELEITESLLLGNDAEVGAALEELHDMGFAISIDDF 714 Query: 255 GMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSKQLHIDVIADGIETK 314 G GY+ LS+L P + + ++ ++ + II ++ L ++VIA+G+ET Sbjct: 715 GTGYSALSYLNRFPLDQIKIDRSFIQGFPADREKVELVKAIISIAGALQLEVIAEGVETS 774 Query: 315 KQAGYMIERGVKYLKGIALSSPLPADAFVRKLLAS 349 QA Y+ +G + +G PLP D F R L + Sbjct: 775 HQAEYLHAQGCRLAQGHLFGRPLPQDRFERLLAGN 809 >UniRef50_B0SHX8 Signal transduction protein n=2 Tax=Leptospira biflexa serovar Patoc RepID=B0SHX8_LEPBA Length = 818 Score = 332 bits (851), Expect = 1e-89, Method: Composition-based stats. Identities = 59/335 (17%), Positives = 131/335 (39%), Gaps = 11/335 (3%) Query: 17 VNIEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIKT-VSCQKMKLYKKLNVKSDLTL 75 V++ +E ++L L + + + S+ +S +L SD+ + Sbjct: 474 VDVSNKSSAAEFAQKILDILSQPFHIMGRDLFTTISMGIALSPNDGVTSAELLKNSDMAM 533 Query: 76 WRDVFLR---FKAYLQPKNIICDNFNSSVLPVVSSKGESMAHYNIYYQPIYNAKNGNIAG 132 ++ L +K Y +I + + K +++QP + + G Sbjct: 534 YKAKELGRNNYKFYTNE--LILRSEKRLYIENSLRKAIQNEELLLFFQPKISTITNQVCG 591 Query: 133 CDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINKLFSPIKNNLPH----GFFIT 188 + I K+ + + I + + + + + +K F ++ Sbjct: 592 AEALIRWKHPERGWV-PPIEFIPVAEDSGIIERIGDWVLEEACRLKKQWSEKNLPSFPLS 650 Query: 189 ININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSLRRIRNNNVY 248 IN++ + + + I +G + L+ + + + + + + Sbjct: 651 INVSGKQLARANWSHRVQATILQYGINPEEIELELTESSIMENPEKSIEAFEYLSELGIK 710 Query: 249 LSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSKQLHIDVIA 308 +S++DFG GY+ LS+L+ I + + ++ D+E N I II+++ L ++VIA Sbjct: 711 VSIDDFGTGYSSLSYLKKINADVIKIDRSFVVDLELNEDDRAICKAIINMAHSLGLEVIA 770 Query: 309 DGIETKKQAGYMIERGVKYLKGIALSSPLPADAFV 343 +G+E Q + + G ++G S PLP D FV Sbjct: 771 EGVENPAQRDLLHDLGCHMIQGYLYSKPLPEDEFV 805 >UniRef50_C4ZNV7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Thauera sp. MZ1T RepID=C4ZNV7_THASP Length = 884 Score = 332 bits (851), Expect = 1e-89, Method: Composition-based stats. Identities = 66/335 (19%), Positives = 132/335 (39%), Gaps = 22/335 (6%) Query: 32 LLSQLLKGYSVNEISKRRNRSIKTVSCQKMKLYKKLNVKSDLTLWRDVFLRFKAYLQPKN 91 +L+ L + + + R + SI ++ D L R ++A L +N Sbjct: 555 ILAALNQRFQLGSSEHRTSVSIGVSLFGELADEP-----VDEPLRRADMAMYRAKLGGRN 609 Query: 92 IICDNFNSSVLPVVSSKG---------ESMAHYNIYYQPIYNAKNGNIAGCDVTIALKNS 142 +C F+ S+L V ++ + ++YQP A +G + G + + + Sbjct: 610 AVC-FFDPSMLADVRARADVEAGLWIALEQRQFVLHYQPQV-AADGAVLGVEALVRWHHP 667 Query: 143 DGSAFALDSDRINYNPNDNKVSYLFGHINKLFSPIK-----NNLPHGFFITININPEDIL 197 + I + L + + + I +N++ L Sbjct: 668 VRG-LVPPGEFIPLAEECGLILPLGRWVLEAACAQLAAWADDPWRSRLVIAVNVSARQFL 726 Query: 198 TCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSLRRIRNNNVYLSLNDFGMG 257 D + ++ G + RL L+ + + + + + ++ V SL+DFG G Sbjct: 727 HEDFVAGVVAALERSGADPGRLDLELTESSLVTDVDKVSEKMEALKALGVGFSLDDFGTG 786 Query: 258 YAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSKQLHIDVIADGIETKKQA 317 Y+ L++L+ +P + + ++ DI + IA II L+ L + VIA+G+E ++Q Sbjct: 787 YSSLAYLKRLPLDQLKIDRSFVRDILVDPNDAAIARMIIVLADNLGLRVIAEGVECEEQR 846 Query: 318 GYMIERGVKYLKGIALSSPLPADAFVRKLLASLKQ 352 ++ G +G S+P P DA L A + Sbjct: 847 DFLARNGCSSYQGYLFSAPQPIDALEAFLDARRSR 881 >UniRef50_C0ZBG1 Probable signaling protein YkoW n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZBG1_BREBN Length = 805 Score = 332 bits (851), Expect = 1e-89, Method: Composition-based stats. Identities = 59/333 (17%), Positives = 136/333 (40%), Gaps = 14/333 (4%) Query: 25 LSEIEIELLSQLLKGYSVNEISKRRNRSIKTV-SCQKMKLYKKLNVKSDLTLWRD---VF 80 +S + E+ + + + ++ SI + + L +D ++ Sbjct: 473 VSSMANEINETIEQAFFIHGHELYITTSIGISRYPEDGQDRSVLMRNADAAMYAAKDKGK 532 Query: 81 LRFKAYL-QPKNIICDNFNSSVLPVVSSKGESMAHYNIYYQPIYNAKNGNIAGCDVTIAL 139 F Y+ + + D N + ++ + + ++YQP +AK+G I G + I Sbjct: 533 NSFHLYVPNLEQAVNDKMN---IQNELNRALARQEFLLHYQPQVSAKSGAIVGVEALIRW 589 Query: 140 KNSDGSAFALDSDRINYNPNDNKVSYLFGHI----NKLFSPIKNNLPHGFFITININPED 195 + + D I+ + + + K ++ + +N++ Sbjct: 590 DHPERGLLLPD-QFISVAEETGLIVPIGEWVLRTACKQNKQWQDQGLKPLRVAVNLSARQ 648 Query: 196 ILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSLRRIRNNNVYLSLNDFG 255 L D + + L L+ + + + R +L+ ++ V+++++DFG Sbjct: 649 FLKQDFTQMIAEILHQTRLAPEYLELEITES-SMIDVHRATQALKELKQLGVHVAIDDFG 707 Query: 256 MGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSKQLHIDVIADGIETKK 315 GY+ L +L+ P + + + ++ D+ I +TII ++ L + VIA+G+ETK+ Sbjct: 708 TGYSSLYYLKEFPLNRLKIDRSFVRDMIEQPSNQAIVSTIISMAHHLQMHVIAEGVETKE 767 Query: 316 QAGYMIERGVKYLKGIALSSPLPADAFVRKLLA 348 + ++ E + ++G S PLP++ L A Sbjct: 768 ELAFLQEHLCEEVQGYLFSRPLPSEDVAFYLQA 800 >UniRef50_Q47FU0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q47FU0_DECAR Length = 1006 Score = 332 bits (851), Expect = 1e-89, Method: Composition-based stats. Identities = 60/342 (17%), Positives = 131/342 (38%), Gaps = 20/342 (5%) Query: 19 IEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIKT-VSCQKMKLYKKLNVKSDLTLW- 76 +E ++ + +L+ + + Y + SI + + L +D ++ Sbjct: 669 VEHTSAVAMVAEKLVFSVGQSYQIGGYDLYSTPSIGIAIYPTDGEDGDILMKNADAAMYH 728 Query: 77 -----RDVFLRFKAYLQPKNIICDNFNSSVLPVVSSKGESMAHYNIYYQPIYNAKNGNIA 131 R+ F F A + + N + + + +YYQP+ + + +A Sbjct: 729 AKMAGRNNFQFFDAKMNEAALERLNTEH-----ALRRALANQEFCLYYQPVIDLASNRVA 783 Query: 132 GCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHI----NKLFSPIKNNLPHGFFI 187 + I + + L I + L + + + G + Sbjct: 784 SLEALIRWNHPEKGLL-LPGKFIGIAEETGLIQPLGEWVLWAACRQLADFAAAGISGIKM 842 Query: 188 TININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSLRRIRNNNV 247 +NI+ + ++ I+ + + L+ + + + L + V Sbjct: 843 GVNISAIQMRNGNLPLLARGVIEAYDIDPRNLIFEITESVAMEQPTETVRILDLLNAMGV 902 Query: 248 YLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSKQLHIDVI 307 ++++DFG GY+ LS+L+ P +++ L ++ I +I I L+ L + V+ Sbjct: 903 SVAIDDFGTGYSSLSYLRMFPINHLKLDRSFVEQIGEEIDGCVICDATIGLAHSLELKVV 962 Query: 308 ADGIETKKQAGYMIERGVKYLKGIALSSPLPADA---FVRKL 346 A+G+ET+ Q Y+ RG ++G S P+PAD F+R+ Sbjct: 963 AEGVETQAQLDYLRSRGCDMVQGFLFSRPVPADEVLAFIRQY 1004 >UniRef50_C6XBJ6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6XBJ6_METSD Length = 1150 Score = 332 bits (851), Expect = 2e-89, Method: Composition-based stats. Identities = 60/346 (17%), Positives = 136/346 (39%), Gaps = 18/346 (5%) Query: 16 IVNIEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIK-TVSCQKMKLYKKLNVKSDLT 74 I N+ P +++ I +L L Y + + SI TV + +L +D Sbjct: 809 IANLPDPSVMTLIAQRVLDALAAPYDLEGEIVYLSASIGITVFPEDATTSAELLKNADQA 868 Query: 75 LW------RDVFLRFKAYLQPKNIICDNFNSSVLPVVSSKGESMAHYNIYYQPIYNAKNG 128 ++ R+ F F +Q + + +Y+QPI + + Sbjct: 869 MYEAKKNGRNRFSFFTPMMQAMAQARMRMMRD-----LRNALGLNQFTVYFQPIVDLSSQ 923 Query: 129 NIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINKLFSPIKNN----LPHG 184 I + I ++ + + ++ I + + + + + + + Sbjct: 924 RIHKAEALIRWQHPELGFISP-AEFIPLAEETGLIHEIGDWVFQQSAQLVKQCIPIVGDD 982 Query: 185 FFITININPEDILTC-DIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSLRRIR 243 F +++N +P ++ + ++ G +V++ + L L R Sbjct: 983 FQVSVNKSPVQFRDRTQAHQDWMEYLSGLGLSGHNIVVEITEGLLLNADSGISDKLLHFR 1042 Query: 244 NNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSKQLH 303 + + ++++DFG GY+ LS+L+ Y+ + ++ ++ + I ++ +L Sbjct: 1043 DAGMQVAIDDFGTGYSSLSYLKKFDIDYLKIDQSFVRNLSGEGEDLALCEAIATMAHKLD 1102 Query: 304 IDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLLAS 349 + VIA+G+ET Q + + G Y +G S P+PA+ F++ L S Sbjct: 1103 LRVIAEGVETTAQRDLLAQIGCDYGQGYLFSRPVPAEEFMQLLERS 1148 >UniRef50_Q1JY96 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JY96_DESAC Length = 904 Score = 331 bits (850), Expect = 2e-89, Method: Composition-based stats. Identities = 59/336 (17%), Positives = 139/336 (41%), Gaps = 8/336 (2%) Query: 19 IEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIKTVSCQKMKLYKK-LNVKSDLTLWR 77 IE P ++ + +L QL ++++ N S+ + L +D+ ++R Sbjct: 570 IEDPHDITVLCRRILKQLELPHALSGRDYTVNVSMGVTVFPDDADTPEDLIKNADIAMYR 629 Query: 78 DVFLRFKAYLQPKNIICDN-FNSSVLPVVSSKGESMAHYNIYYQPIYNAKNGNIAGCDVT 136 Y + L S + ++YQP + ++ ++ G + Sbjct: 630 AKEAGKNGYQLFTAAMQQTIMQRIELEARLSDALCRNEFVLFYQPQVDLESEHVIGAEAL 689 Query: 137 IALKNSDGSAFALDSDRINYNPNDNKVSYLFGHI----NKLFSPIKNNLPHGFFITININ 192 I + DG D + I ++ + + + + + F +++N++ Sbjct: 690 IRWQKPDGQLVYPD-EFIPIAEECGLITQIDHWVLKAACRQANKWREQSGRNFKMSVNLS 748 Query: 193 PEDI-LTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSLRRIRNNNVYLSL 251 E ++ + + + G L L+ + + + + ++ V +++ Sbjct: 749 SEQFAKDQELVQRVKNVLNKTGLPAECLTLEVTENAVMSDTESAIAIMTQLTALGVSIAI 808 Query: 252 NDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSKQLHIDVIADGI 311 +DFG GY+ LS+++N P Y+ + ++ DI +S IA +II L + L+++VIA+G+ Sbjct: 809 DDFGTGYSSLSYVKNFPARYLKIDRSFVKDIPGDSDDMAIAASIISLGRNLNMEVIAEGV 868 Query: 312 ETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLL 347 E + Q ++ + + ++G P A+ F ++ Sbjct: 869 EEQTQIDFLKQHRCQQVQGYFYGKPCAAEFFSQQFF 904 >UniRef50_Q88LF0 Sensory box protein n=16 Tax=Proteobacteria RepID=Q88LF0_PSEPK Length = 1136 Score = 331 bits (850), Expect = 2e-89, Method: Composition-based stats. Identities = 57/334 (17%), Positives = 122/334 (36%), Gaps = 10/334 (2%) Query: 25 LSEIEIELLSQLLKGYSVNEISKRRNRSIKTVSCQKMKLYK-KLNVKSDLTLWRDVFLRF 83 + E+ L L + S++ + SI L ++D+ L+R Sbjct: 800 VRELADTLRELLAEPMSLDGQRLQVTPSIGVALIPDHGTTPADLLKRADIALYRAKDSGR 859 Query: 84 KAYLQPKNIICDNFNSSV-LPVVSSKGESMAHYNIYYQPIYNAKNGNIAGCDVTIALKNS 142 + + + + + +++QP +A++ I G +V + + Sbjct: 860 NTTQLFHTTMQKAASERLRMENDLRLALARGELALHFQPQVDARDNRIVGAEVLLRWHHP 919 Query: 143 DGSAFALDSDRINYNPNDNKVSYLFGHINKLFSPIKNNL-------PHGFFITININPED 195 S I + + I + F + +NI+P Sbjct: 920 QLGQ-QPPSQFIQVLEESGLILEVGSWILDEACDACARMLTDGLIDADDFNLCVNISPRQ 978 Query: 196 ILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSLRRIRNNNVYLSLNDFG 255 D L + + R L L+ + + + S + ++ V +++DFG Sbjct: 979 FRQNDFVGRVLRSLDDYRLPRQMLTLEITEGIVIQNLEDTISKMCELKRYGVSFAMDDFG 1038 Query: 256 MGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSKQLHIDVIADGIETKK 315 GY+ L++L+ +P + + ++ D + I I+ +++ L + VIA+G+E + Sbjct: 1039 TGYSSLTYLKRLPVDALKIDQSFVRDAPVDPNDAEIVRAIVAMARSLDLAVIAEGVELTE 1098 Query: 316 QAGYMIERGVKYLKGIALSSPLPADAFVRKLLAS 349 Q ++ G +G S PLP F + LL + Sbjct: 1099 QLAFLERLGCHLYQGYLHSRPLPLPEFRQMLLEA 1132 >UniRef50_Q21SH7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Proteobacteria RepID=Q21SH7_RHOFD Length = 658 Score = 331 bits (850), Expect = 2e-89, Method: Composition-based stats. Identities = 59/321 (18%), Positives = 126/321 (39%), Gaps = 8/321 (2%) Query: 36 LLKGYSVN-EISKRRNRSIKTVSCQKMKLYKKLNVK-SDLTLWRDVFLRFKAYLQPKNII 93 L + Y ++ + R S+ L +L ++ +D L++ + + Sbjct: 338 LSEPYGLSSGVEVRIGASVGISIYPDNGLTPELMLQQADSALYQAKIEGRGRFAYFSESL 397 Query: 94 CDNFNSSV-LPVVSSKGESMAHYNIYYQPIYNAKNGNIAGCDVTIALKNSDGSAFALDSD 152 + + + V + + +YYQP + +G I G + + + + Sbjct: 398 TQAARARIDIEVRLRRAITQGELRVYYQPQVDIPSGRIVGAEALVRWQCPIEG-LVPPAR 456 Query: 153 RINYNPNDNKVSYLFGHI----NKLFSPIKNNLPHGFFITININPEDILTCDIERECLHF 208 I + + + + + + +N++ L DI + Sbjct: 457 FITIAEATGLIGEIDDWVLRETCQQGQRWRAAGLPTLTLAVNLSAYQFLQGDISQTVAQV 516 Query: 209 IKVFGTERIRLVLQFSTKEELYIIRRYQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIP 268 ++ G L L+ + + + L R++ V L+++DFG GY+ L++L+ P Sbjct: 517 LRDTGYPAAFLELELTESALMQREAQAIQMLDRLKALGVRLAIDDFGTGYSSLAYLKLFP 576 Query: 269 FSYVNLHKTMFHDIESNSLTDIIATTIIDLSKQLHIDVIADGIETKKQAGYMIERGVKYL 328 + + K DI ++ I T II ++ L + V+A+G+E K+Q Y+ +G Sbjct: 577 LDVLKIDKRFIDDIPAHRDDMEIVTAIIAMAHSLRLKVLAEGVENKEQLAYLQTQGCDQF 636 Query: 329 KGIALSSPLPADAFVRKLLAS 349 +G S P+PA F + L+ Sbjct: 637 QGYLTSRPVPAAEFEKLFLSG 657 >UniRef50_C7QU83 Sensor protein n=3 Tax=cellular organisms RepID=C7QU83_CYAP0 Length = 1514 Score = 331 bits (850), Expect = 2e-89, Method: Composition-based stats. Identities = 65/366 (17%), Positives = 141/366 (38%), Gaps = 20/366 (5%) Query: 5 KIKLNLIDYDSIVNI---EFPCLLSEIEIELLSQLL---------KGYSVNEISKRRNRS 52 +++ L D++ I EF +L +IE + ++ + + + S Sbjct: 1147 RLRQVLRSSDTVARISGDEFVAVLEDIEDIQHASMVVAKLMTVFEEPFPLEGQIIHMTSS 1206 Query: 53 IK-TVSCQKMKLYKKLNVKSDLTLWRDVFLRFKAY-LQPKNIICDNFNSSVLPVVSSKGE 110 + ++ L +D ++R Y + + F + Sbjct: 1207 MGLSLFPDDGMDTAILLRNADSAMYRAKEEGRNTYCFYAEEMTSAAFEYVLFENALRGAL 1266 Query: 111 SMAHYNIYYQPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHI 170 + + YQP + + G +V + + + + + I + + + Sbjct: 1267 KRNEFYLVYQPQIDLSSHRWVGMEVLLRWHHPELGIVSP-AQFIPIAEQSGLIQEIGTWV 1325 Query: 171 N-KLFSPIKNNLPHGF---FITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTK 226 + K L G I +N+ I + + G L L+ + Sbjct: 1326 LYRACCQAKTWLDQGIDFGHIAVNVAAPQIQQNNFVHLVQDALDSSGLPSPHLELELTEG 1385 Query: 227 EELYIIRRYQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNS 286 ++ L +++ +YL+++DFG GY+ LS+L+ +P + + + K+ DI ++ Sbjct: 1386 LVMHQTEDRIKQLEVLQDMGIYLAIDDFGTGYSSLSYLKRLPINKLKIDKSFVRDIPHDT 1445 Query: 287 LTDIIATTIIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKL 346 I+ +I L K L++ +IA+G+E + QA ++ E+G +G S PLP + + L Sbjct: 1446 NDMAISEAVIALGKALNLRIIAEGVEQEIQATFLREKGCHEAQGYLYSKPLPPEEITQ-L 1504 Query: 347 LASLKQ 352 A + Q Sbjct: 1505 FAEVSQ 1510 >UniRef50_C9Y9D8 Putative uncharacterized protein n=1 Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9Y9D8_9BURK Length = 897 Score = 331 bits (850), Expect = 2e-89, Method: Composition-based stats. Identities = 57/319 (17%), Positives = 123/319 (38%), Gaps = 9/319 (2%) Query: 32 LLSQLLKGYSVNEISKRRNRSIKTVS-CQKMKLYKKLNVKSDLTLWRDVFLRFKAYLQPK 90 +L L YS+ SI V + + L K+D+ +++ Sbjct: 571 ILDALALPYSLRGHGYNSTPSIGIVVFMEDHETMDDLLKKADVAMYQAKAAGRNTARFFD 630 Query: 91 NIICDNFN-SSVLPVVSSKGESMAHYNIYYQPIYNAKNGNIAGCDVTIALKNSDGSAFAL 149 ++ + L G + ++YQ +++ G G + + + + Sbjct: 631 PVMQAAVTTHAELAKEIRLGLQRHEFVLHYQVQIDSQ-GRCTGAEALVRWNHRVRGLVSP 689 Query: 150 DSDRINYNPNDNKVSYLFGHIN-----KLFSPIKNNLPHGFFITININPEDILTCDIERE 204 + I + L + +L +N + + + +N++ + + Sbjct: 690 -AHFIPLAEETGMILPLGEWVMESACQQLVEWSRNPMTAHWTLAVNVSASQLAQPEFVAS 748 Query: 205 CLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSLRRIRNNNVYLSLNDFGMGYAELSHL 264 ++ G +L L+ + + + + I+ V SL+DFG GY+ LS+L Sbjct: 749 VREALQRSGAPAGQLKLELTESMLVDDVEDIIVKMMAIKELGVSFSLDDFGTGYSSLSYL 808 Query: 265 QNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSKQLHIDVIADGIETKKQAGYMIERG 324 + +P S + + ++ D+ ++ +IA T++ L L + VIA+G+ET +Q + Sbjct: 809 KRLPLSQLKIDQSFVRDVLTDPSDAVIARTVVALGHSLGLTVIAEGVETAEQRDALAAMQ 868 Query: 325 VKYLKGIALSSPLPADAFV 343 +G P PADA + Sbjct: 869 CDAFQGYYFGRPAPADALI 887 >UniRef50_B1Y2A0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Leptothrix cholodnii SP-6 RepID=B1Y2A0_LEPCP Length = 810 Score = 331 bits (850), Expect = 2e-89, Method: Composition-based stats. Identities = 58/356 (16%), Positives = 140/356 (39%), Gaps = 10/356 (2%) Query: 5 KIKLNLIDYDSIVNIEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIKTVSCQKMKLY 64 + + + D + ++ E + ++L L + Y ++ + SI + Sbjct: 457 EFVVIVQDLGARLD-ECATQAEGVGEKILDALNQPYPLDGHVRHSTPSIGITLFADDRDS 515 Query: 65 -KKLNVKSDLTLWRDVFLRFKA-YLQPKNIICDNFNSSVLPVVSSKGESMAHYNIYYQPI 122 L ++D+ +++ ++ + L + ++H+ ++YQP Sbjct: 516 VDDLLKEADMAMYQAKTAGRNTLRFFDADMQAMLVQRAALEEDMRESMRLSHFLLHYQPQ 575 Query: 123 YNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINKLFSPIKNNLP 182 +G I G +V + + ++ I + N ++ L + + + Sbjct: 576 V-VGSGRITGAEVLLRWPHP-LRGLVPPAEFIPLAEDTNLITALGHWVLETACKTLADWS 633 Query: 183 -----HGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQS 237 +++N++ E + ++ G + L L+ + + + + Sbjct: 634 AQDDMKHLSVSVNVSARQFRQPHFVAEVMSILERTGADPHLLKLELTESLLVEDVEDIVA 693 Query: 238 SLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIID 297 + +++ V SL+DFG GY+ L+HL+ +P + + ++ DI ++ I ++ Sbjct: 694 KMSALKSRGVGFSLDDFGTGYSSLAHLKRLPLDQLKIDQSFVRDILTDPNDLAIGRMVVA 753 Query: 298 LSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLLASLKQV 353 L+ L + VIA+G+E Q + + G +G S PLP + F A+ + V Sbjct: 754 LADSLGLTVIAEGVELAAQRELLAQIGCDAYQGYLFSRPLPREPFEACCRAARQAV 809 >UniRef50_Q607T2 Sensory box protein/GGDEF domain protein n=2 Tax=cellular organisms RepID=Q607T2_METCA Length = 1346 Score = 331 bits (850), Expect = 2e-89, Method: Composition-based stats. Identities = 58/330 (17%), Positives = 137/330 (41%), Gaps = 11/330 (3%) Query: 24 LLSEIEIELLSQLLKGYSVNEISKRRNRSIK-TVSCQKMKLYKKLNVKSDLTLW---RDV 79 +S++ ++L+ L K + + + SI ++ ++ L +D ++ + Sbjct: 1004 AVSQVADKILAALRKPFEHSGQTFAVTGSIGISLYPHDGTDFETLLRNADTAMYHAKQQG 1063 Query: 80 FLRFKAYLQPKNIICDNFNSSVLPVVSSKGESMAHYNIYYQPIYNAKNGNIAGCDVTIAL 139 +F+ Y N+ D + + ++QP + NG + G + + Sbjct: 1064 RNQFRFYDPGMNV--DILARLTVLSELREAIPAGELRTFFQPEIDLANGTLVGAEALVRW 1121 Query: 140 KNSDGSAFALDSDRINYNPNDNKVSYLFGHI----NKLFSPIKNNLPHGFFITININPED 195 ++ + D I +++ + + + + + K + +N+ Sbjct: 1122 QHPTRGLLSPD-QFIPVAESNDLIIAISDWVLEDTCRHLAQWKKADQAPITVGVNLAARH 1180 Query: 196 ILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSLRRIRNNNVYLSLNDFG 255 + + +G L L+ + L + L+ + LS++DFG Sbjct: 1181 FRDPRLVPRVKSLLCRYGVPGSSLQLELTESTLLDADAQTMIVLQELIALGCSLSIDDFG 1240 Query: 256 MGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSKQLHIDVIADGIETKK 315 GY+ LS+L+N+P + + + ++ DI ++ I+ T++ L L + VIA+G+ET++ Sbjct: 1241 TGYSSLSYLKNLPIATLKIDQSFVRDIAFDADDRTISGTVVALGHSLGLKVIAEGVETEE 1300 Query: 316 QAGYMIERGVKYLKGIALSSPLPADAFVRK 345 Q ++E+G + +G S PL + F++ Sbjct: 1301 QRRILLEQGCDFGQGYLFSRPLSSKEFIKW 1330 >UniRef50_Q1NJA1 PAS:GGDEF:EAL n=7 Tax=delta proteobacterium MLMS-1 RepID=Q1NJA1_9DELT Length = 941 Score = 331 bits (849), Expect = 2e-89, Method: Composition-based stats. Identities = 60/335 (17%), Positives = 131/335 (39%), Gaps = 19/335 (5%) Query: 28 IEIELLSQLLKGYSVNEISKRRNRSIK-TVSCQKMKLYKKLNVKSDLTLWRDVFL----- 81 + ++ + L + + ++ SI ++ +L ++D +++ Sbjct: 605 VAEKIRAALDQPFDLDGYEHHIGVSIGLSLFLGHDTPADELFKRADAAMYQAKHAGRNQV 664 Query: 82 -RFKAYLQPKNIICDNFNSSVLPVVSSKGESMAHYNIYYQPIYNAKNGNIAGCDVTIALK 140 F +Q + +S L V + + ++YQP A +G I G + + + Sbjct: 665 RFFDPEMQ-----AELEQASALVVDLRQAIWQGQFQLHYQPQ-TANDGRIIGAEALLRWR 718 Query: 141 NSDGSAFALDSDRINYNPNDNKVSYLFGHINKLFSPIKNNLPH-----GFFITININPED 195 + + + I N + + + + + +N++ Sbjct: 719 HPERGPVSP-MQFIPLAEESNLILAIGRWVLEEACGQLAAWADLPAAGNCKLAVNVSARQ 777 Query: 196 ILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSLRRIRNNNVYLSLNDFG 255 + E + G + L L+ + + + S ++ +R+ + S++DFG Sbjct: 778 FRQPEFVAEIRRILAATGADPKLLKLELTESIVMTELADTVSKMQELRDLGIGFSMDDFG 837 Query: 256 MGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSKQLHIDVIADGIETKK 315 GY+ L+ L+ +P + + + D+ S+ D I TII + + L I VIA+G+ETK+ Sbjct: 838 TGYSSLAQLKRLPLEQLKIDRAFVRDLGSDPHDDAIVETIIAMGRTLDIQVIAEGVETKE 897 Query: 316 QAGYMIERGVKYLKGIALSSPLPADAFVRKLLASL 350 Q + G +G S P+PA F L + + Sbjct: 898 QLATLARYGCDAYQGYLFSRPVPAAQFAHLLTSGV 932 >UniRef50_C1P7J2 Diguanylate cyclase/phosphodiesterase n=1 Tax=Bacillus coagulans 36D1 RepID=C1P7J2_BACCO Length = 559 Score = 331 bits (849), Expect = 2e-89, Method: Composition-based stats. Identities = 55/352 (15%), Positives = 135/352 (38%), Gaps = 11/352 (3%) Query: 5 KIKLNLIDYDSIVNIEFPCLLSEI---EIELLSQLLKGYSVNEISKRRNRSIK-TVSCQK 60 ++ D + + C E+ ++L+ + + S+ ++ + Sbjct: 209 DYEVYRQGGDEFIVLTAGCSREEVKQMAEQILALFYDPFKIEGEDYFLTPSVGISLFPED 268 Query: 61 MKLYKKLNVKSDLTLWRDVFLRF-KAYLQPKNIICDNFNSSVLPVVSSKGESMAHYNIYY 119 + + L +D L++ K + D N ++ + ++Y Sbjct: 269 GEDGETLIKHADTALFKVKERGKGHFLFYSKKMDADFHNYILMEAHLRRAIEKNELAVHY 328 Query: 120 QPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKV----SYLFGHINKLFS 175 QP G I + + +N I + +++ H+ + Sbjct: 329 QPQVQLDTGKIKSFEALLRWRNPKFGNV-PPLKFIPLAEETGLITSIGAWVIDHVCAQIA 387 Query: 176 PIKNNLPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRY 235 + GF + +NI+P+ L + ++ + L ++ + + Sbjct: 388 QWRQKGWAGFRVAVNISPKQFLDPGLAGLIGRTLEKYKLPASVLEIEITEGA-MEDKGHI 446 Query: 236 QSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTI 295 L ++ + +S++DFG GY+ L++L+ P + + ++ ++E++ I TI Sbjct: 447 LKVLSSLKEMGLTISVDDFGTGYSSLNYLKKFPVDILKIDQSFVRELENSQKDAAITKTI 506 Query: 296 IDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLL 347 I L+ QL ++V+A+G+E + Q ++ + +G S P+PA+ ++L Sbjct: 507 IHLAHQLGLEVVAEGVEEQGQVEFLQSARCQKAQGYFFSRPVPAEEVEKQLF 558 >UniRef50_Q2RNE1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Rhodospirillaceae RepID=Q2RNE1_RHORT Length = 951 Score = 331 bits (849), Expect = 2e-89, Method: Composition-based stats. Identities = 52/334 (15%), Positives = 118/334 (35%), Gaps = 7/334 (2%) Query: 25 LSEIEIELLSQLLKGYSVNEISKRRNRSIK-TVSCQKMKLYKKLNVKSDLTLWRDVFLRF 83 L E+ + + V +I + + + + L + +D L R Sbjct: 615 LREVVATIQDAFVPPIEVEGQQFDIGLTIGGALHPEDGREAETLIMHADAALHRAKGGGG 674 Query: 84 KAYLQPKNIICDNFNSSVLPVVSSKGESMAHYNIYYQPIYNAKNGNIAGCDVTIALKNSD 143 + + + + +G + Y+QP + ++G I GC+ + + Sbjct: 675 AFQMFTPEMGARAAHLLTIQHKLRRGLERHEFVAYFQPQVDLRSGLITGCEALARWNSPE 734 Query: 144 GSAFALDSDRINYNPNDNKVSYLFGHI----NKLFSPIKNNLPHGFFITININPEDILTC 199 I + + G + + S + + +NI+ Sbjct: 735 DG-LVPPGKFIGVAEEYGLIDAICGQVLDDSCRWLSTWRARGLPQVPVAVNISGRQFQNA 793 Query: 200 -DIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSLRRIRNNNVYLSLNDFGMGY 258 + ++ G + L L+ + + + + +R V +++DFG GY Sbjct: 794 RQLVAMVDQALRQSGVDPRLLELELTESSAMSDPENAIAVVNLLRERGVSCAIDDFGTGY 853 Query: 259 AELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSKQLHIDVIADGIETKKQAG 318 + LS L+ P + + ++ D+ ++ I II ++ L++ V+A+G+ET Sbjct: 854 SSLSVLKRFPIGKLKIDRSFVMDVTTDPNDAAIVQAIIAMAHALNLRVVAEGVETLDHLA 913 Query: 319 YMIERGVKYLKGIALSSPLPADAFVRKLLASLKQ 352 ++ E ++G + PLP + L Q Sbjct: 914 FLREVHCDAVQGFLFARPLPGEDMALMLAGGPPQ 947 >UniRef50_C7RS22 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RS22_9PROT Length = 1006 Score = 331 bits (849), Expect = 2e-89, Method: Composition-based stats. Identities = 57/330 (17%), Positives = 130/330 (39%), Gaps = 19/330 (5%) Query: 30 IELLSQLLKGYSVNEISKRRNRSIKTVSCQKMKLY-KKLNVKSDLTLW------RDVFLR 82 +++ L + Y ++ S+ ++ +L ++DL ++ R+ Sbjct: 683 EKIIKLLNRPYDLSGHDYHNTPSVGITLFGGQQVGIDELMKRADLAMYEAKASGRNALRF 742 Query: 83 FKAYLQPKNIICDNFNSSVLPVVSSKGESMAHYNIYYQPIYNAKNGNIAGCDVTIALKNS 142 F +Q + + + + YQP +A +G + G + + ++ Sbjct: 743 FDPRMQ-----AVVTARADIEKDLRAAVGRQSFFLAYQPQVDA-SGQVIGAEALLRWQHQ 796 Query: 143 DGSAFALDSDRINYNPNDNKVSYLFGHINK-----LFSPIKNNLPHGFFITININPEDIL 197 + ++ I + L + + F +++N++ Sbjct: 797 QRGTVSP-AEFIPVAEETGLILPLGLWVLETACAQAALWAARPGRERFTVSVNVSARQFR 855 Query: 198 TCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSLRRIRNNNVYLSLNDFGMG 257 + + L + G L L+ + L ++ + + ++ V SL+DFG G Sbjct: 856 QANFVDQVLAVLARSGAHPRNLKLELTESMLLDNVQDIIAKMSALKARGVGFSLDDFGTG 915 Query: 258 YAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSKQLHIDVIADGIETKKQA 317 Y+ LS+L+ +P + + ++ D+ ++ ++IA TII L++ L + VIA+G+E+ +Q Sbjct: 916 YSSLSYLKQLPLDQLKIDQSFVRDLLTDPNDEVIARTIIALARTLGLSVIAEGVESVEQQ 975 Query: 318 GYMIERGVKYLKGIALSSPLPADAFVRKLL 347 + +G +G S PL F L Sbjct: 976 DALAAQGCLAYQGYLFSRPLALADFEAFLR 1005 >UniRef50_Q7NYX4 Putative uncharacterized protein n=1 Tax=Chromobacterium violaceum RepID=Q7NYX4_CHRVO Length = 795 Score = 331 bits (849), Expect = 3e-89, Method: Composition-based stats. Identities = 61/329 (18%), Positives = 132/329 (40%), Gaps = 11/329 (3%) Query: 25 LSEIEIELLSQLLKGYSVNEISKRRNRSIKT-VSCQKMKLYKKLNVKSDLTLWRD---VF 80 L+++ ++L+ L K + SI V + + L +D+ ++R Sbjct: 459 LADMASDILAALGKPLCLEAHEVFITGSIGISVFPHDGRDARTLLKNADVAMYRAKEAGK 518 Query: 81 LRFKAYLQPKNIICDNFNSSVLPVVSSKGESMAHYNIYYQPIYNAKNGNIAGCDVTIALK 140 ++ + N F +L + ++YQP +A +AG + + + Sbjct: 519 NTYQFFDIGMN--TQTFERLLLENGLRMALERHEFELHYQPQLSAGERALAGAEALLRWR 576 Query: 141 NSDGSAFALDSDRINYNPNDNKVSYLFGHINK-LFSPIKNNLPHGFFI---TININPEDI 196 + + I + + + + + G + +N++P Sbjct: 577 HPQLG-LVPPARFIALAEETGLIKPIGDWVLREACRQLAAWDAQGLRVPRLAVNLSPRQF 635 Query: 197 LTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSLRRIRNNNVYLSLNDFGM 256 + + ++ G RL L+ + + S L +++ V+LS++DFG Sbjct: 636 GQPSLPAKVAGALQAAGLAAGRLELEITESMIMQSPTEAVSLLSELKSLGVWLSIDDFGT 695 Query: 257 GYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSKQLHIDVIADGIETKKQ 316 GY+ LSHL+ P + + ++ + + IA I+ ++K+L V+A+G+E+++Q Sbjct: 696 GYSSLSHLKRFPLDTLKIDQSFVEGLPDDDDNAAIAEAILAMAKKLKFQVVAEGVESEEQ 755 Query: 317 AGYMIERGVKYLKGIALSSPLPADAFVRK 345 A ++ +G L+G PLPA F Sbjct: 756 AAFLEGKGCHVLQGYHFGRPLPAGEFAAL 784 >UniRef50_B1XZW3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=7 Tax=cellular organisms RepID=B1XZW3_LEPCP Length = 1069 Score = 331 bits (849), Expect = 3e-89, Method: Composition-based stats. Identities = 54/336 (16%), Positives = 132/336 (39%), Gaps = 17/336 (5%) Query: 28 IEIELLSQLLKGYSVNEISKRRNRSIKT-VSCQKMKLYKKLNVKSDLTLW------RDVF 80 +E L+ ++ + + V + S+ V + +L ++D+ ++ R+ Sbjct: 725 VEQRLIPRVRQPHGVQGAEIHVSCSVGISVFPDDAQDIDELMRQADVAMYQAKAQGRNGA 784 Query: 81 LRFKAYLQPKNIICDNFNSSVLPVVSSKGESMAHYNIYYQPIYNAKNGNIAGCDVTIALK 140 F A + + ++ + +++YQP + +G +AG + + Sbjct: 785 QFFTAEMNQRAQ-----ARLMVENHLRSAVAQGQLSLHYQPRIHVADGRVAGVEGLLRWH 839 Query: 141 NSDGSAFALDSDRINYNPNDNKVSYLFGHINKL-FSPIKNNLPHGFF---ITININPEDI 196 + + D I + + + + + I+ G ++IN++ + Sbjct: 840 SPELGHVPPD-RFIPVAEETGLIIEIGAWVIEAACAQIERWRGQGLQEVAVSINLSALQL 898 Query: 197 LTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSLRRIRNNNVYLSLNDFGM 256 + ++ +L L+ + + + + +L +R + LS++DFG Sbjct: 899 RDPGLLDVLRASLERHAVPPGQLELELTESILMDQVDAHLVTLHALRELGLRLSIDDFGT 958 Query: 257 GYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSKQLHIDVIADGIETKKQ 316 GY+ L++L P + + ++ D+ + I II L L + V+A+G+E + + Sbjct: 959 GYSSLNYLTRFPIDQLKIDRSFVRDMLDDPRDLAIIKAIIGLGHTLGLKVVAEGVERELE 1018 Query: 317 AGYMIERGVKYLKGIALSSPLPADAFVRKLLASLKQ 352 + G L+G + P+ AD LL +++ Sbjct: 1019 VQALRAAGCDELQGYHFARPMAADTATAWLLDWIRR 1054 >UniRef50_A9BNX4 Diguanylate cyclase/phosphodiesterase n=3 Tax=Comamonadaceae RepID=A9BNX4_DELAS Length = 916 Score = 331 bits (849), Expect = 3e-89, Method: Composition-based stats. Identities = 55/329 (16%), Positives = 138/329 (41%), Gaps = 19/329 (5%) Query: 30 IELLSQLLKGYSVNEISKRRNRSIK-TVSCQKMKLYKKLNVKSDLTLWR------DVFLR 82 ++L++L + Y + R SI T+ ++ + +L ++D+ +++ Sbjct: 573 EKILARLNQSYVLGAHLHRSACSIGATLFGRQPQSAAELLKQADIAMYQIKARNGSGLCF 632 Query: 83 FKAYLQPKNIICDNFNSSVLPVVSSKGESMAHYNIYYQPIYNAKNGNIAGCDVTIALKNS 142 F +Q + + + + + + ++YQP + G + G + + ++ Sbjct: 633 FDPQMQ-----VEIHQRVRMEGDLRQALAQSQFELHYQPQFTLA-GEVIGAEALLRWRHP 686 Query: 143 DGSAFALDSDRINYNPNDNKVSYLFGHINKLFSPIKNNLPHG-----FFITININPEDIL 197 + I + L + + + +N++ Sbjct: 687 ERG-LVPPGMFIAVAEESEIIVPLGMWVIRTACEQLAIWQKDARLRHLQVAVNVSARQFR 745 Query: 198 TCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSLRRIRNNNVYLSLNDFGMG 257 + + + ++ G L L+ + + ++ ++++R++ V S++DFG G Sbjct: 746 HQNFASQVIEQVRNAGIAPHLLKLELTESLVIENVQESIDKMKQLRSHGVCFSMDDFGTG 805 Query: 258 YAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSKQLHIDVIADGIETKKQA 317 ++ L++L +P + + + ++ + D+I TII +++ L++DVIA+G+ET +Q Sbjct: 806 HSSLTYLTQLPLNQLKIDQSFVRHLGLRHTDDVIVQTIIGMARNLNLDVIAEGVETLEQR 865 Query: 318 GYMIERGVKYLKGIALSSPLPADAFVRKL 346 + G +Y +G S P+P AF + L Sbjct: 866 ALLAHYGCEYFQGYLFSPPVPIRAFEQLL 894 >UniRef50_A0P1H8 Putative uncharacterized protein n=1 Tax=Labrenzia aggregata IAM 12614 RepID=A0P1H8_9RHOB Length = 944 Score = 331 bits (849), Expect = 3e-89, Method: Composition-based stats. Identities = 59/333 (17%), Positives = 136/333 (40%), Gaps = 7/333 (2%) Query: 25 LSEIEIELLSQLLKGYSVNEISKRRNRSIK-TVSCQKMKLYKKLNVKSDLTLWR---DVF 80 + E+ ++ ++ + + + + SI T++ +L ++DL L+R D Sbjct: 610 VEELAQSVIWEISQPFQITDHEIVIGVSIGITIARADGTAGDELFKQADLALYRAKEDGR 669 Query: 81 LRFKAYLQPKNIICDNFNSSVLPVVSSKGESMAHYNIYYQPIYNAKNGNIAGCDVTIALK 140 ++ + ++ + + +Y+QP Y + I+G + + Sbjct: 670 NTYRFFETDMGTAVNDRRELITD--LRTAVANGELELYFQPQYTLADDRISGFEALVRWN 727 Query: 141 NSDGSAFALDSDRINYNPNDNKVSYLFGHINKLFSPIKNNLPHGFFITININPEDILTCD 200 + + +D I + +S L + I P + +N++P + Sbjct: 728 HPKRGMVSP-ADFIPLAEDTGLISQLGEWVLMEACRIAAKWPDHLRVAVNLSPRQLRGHA 786 Query: 201 IERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSLRRIRNNNVYLSLNDFGMGYAE 260 + + G + RL L+ + L SL + ++ V +S++DFG GY+ Sbjct: 787 FGPVLIDALVQTGLKADRLELEVTESVLLTDSEDVLDSLHQAKSLGVKVSMDDFGTGYSS 846 Query: 261 LSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSKQLHIDVIADGIETKKQAGYM 320 LS+L+ PF + + ++ + + + I +I+L+ L++ A+G+ET++ + Sbjct: 847 LSYLRRFPFDKIKIDQSFVRSMAYSDDSISIVKAVIELANNLNMTTTAEGVETRQLLDML 906 Query: 321 IERGVKYLKGIALSSPLPADAFVRKLLASLKQV 353 E G +G L P+P D+ + A + + Sbjct: 907 TEIGCTEAQGYYLGRPMPVDSTEDLIFAGERSL 939 >UniRef50_C7RQ11 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RQ11_9PROT Length = 978 Score = 331 bits (849), Expect = 3e-89, Method: Composition-based stats. Identities = 58/321 (18%), Positives = 120/321 (37%), Gaps = 12/321 (3%) Query: 32 LLSQLLKGYSVNE-ISKRRNRSIKT-VSCQKMKLYKKLNVKSDLTLWRDVF---LRFKAY 86 LL+ L + + + SI V Q K L +D+ + R ++ Y Sbjct: 509 LLAALAPPFVLADGHETYARASIGISVFPQDGKGANDLLRSADVAMHRAKQRGGNQYAFY 568 Query: 87 LQPKNIICDNFNSSVLPVVSSKGESMAHYNIYYQPIYNAKNGNIAGCDVTIALKNSDGSA 146 + + + ++YQP + +G I G + + + G Sbjct: 569 TGE--LGHGALQRLEMETALRRALIQGELVLHYQPKLDLASGVIVGGEALLRWQRP-GFG 625 Query: 147 FALDSDRINYNPNDNKVSYLFGHI----NKLFSPIKNNLPHGFFITININPEDILTCDIE 202 I + + + + + +N++ ++E Sbjct: 626 LVPPYRFIPLAEETGLIVPIGAWVINETCRQIRAWAEAGQPSVMVAVNVSARQFAGGELE 685 Query: 203 RECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSLRRIRNNNVYLSLNDFGMGYAELS 262 ++ + L L+ + + + L +R V ++L+DFG GY+ LS Sbjct: 686 AVLATALRKHAVDPRMLGLELTESMLMAAPEQATERLDALRRVGVAVALDDFGTGYSSLS 745 Query: 263 HLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSKQLHIDVIADGIETKKQAGYMIE 322 +L P + + ++ I S+ IAT +I L+ ++ + V+A+G+ET+ Q Y+ + Sbjct: 746 YLSRFPVDELKIDRSFITHIVSDPKAANIATAVIALAHRMALKVVAEGVETETQLSYLRK 805 Query: 323 RGVKYLKGIALSSPLPADAFV 343 ++G S+P+PAD F Sbjct: 806 NRCDQIQGYLFSAPVPADEFA 826 >UniRef50_Q07PV4 Diguanylate cyclase/phosphodiesterase n=1 Tax=Rhodopseudomonas palustris BisA53 RepID=Q07PV4_RHOP5 Length = 928 Score = 331 bits (849), Expect = 3e-89, Method: Composition-based stats. Identities = 59/335 (17%), Positives = 134/335 (40%), Gaps = 13/335 (3%) Query: 26 SEIEIELLSQLLKGYSVNEISKRRNRSIKT-VSCQKMKLYKKLNVKSDLTLW------RD 78 +++ + + + K Y + SI ++ Q +L +DL ++ R Sbjct: 596 TDLVERIYAAIRKPYDCAGHLLTADASIGIALAPQHGANLDQLLKNADLAMYGAKAEGRR 655 Query: 79 VFLRFKAYLQPKNIICDNFNSSVLPVVSSKGESMAHYNIYYQPIYNAKNGNIAGCDVTIA 138 + F+ ++ + I + + + + IYYQP + + GC+ + Sbjct: 656 TYRFFEPAMEARVIALRTM-----EIDLRQAIADGGFEIYYQPQLRLCDDKVTGCEALLR 710 Query: 139 LKNSDGSAFALDSDRINYNPNDNKVSYLFGHINKLFSPIKNNLPHGFFITININPEDILT 198 ++ + ++ I ++ L + P +++N++P + Sbjct: 711 WRHPVRGMISP-AEFIPVAEETGLINQLGEWVLVESCAEAVKWPGDVKVSVNVSPVQFGS 769 Query: 199 CDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSLRRIRNNNVYLSLNDFGMGY 258 + + G RL L+ + + + L +IR V ++L+DFG GY Sbjct: 770 EGFALKVAAALANSGLPAHRLELEITEAVLIRDDEAALTMLHQIRALGVGIALDDFGTGY 829 Query: 259 AELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSKQLHIDVIADGIETKKQAG 318 + LS+L+ PF + + ++ +IE + + I ++D++ + A+G+ET+ Q Sbjct: 830 SSLSYLRRFPFDKIKIDRSFIKNIEDANGSAHIVKAVVDIAAAQRMTTTAEGVETEGQLN 889 Query: 319 YMIERGVKYLKGIALSSPLPADAFVRKLLASLKQV 353 + G ++G S P+PA LL +++ Sbjct: 890 ELRRLGCSEMQGYLYSPPVPASKLAALLLPPDRRL 924 >UniRef50_Q1JVV8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JVV8_DESAC Length = 764 Score = 331 bits (849), Expect = 3e-89, Method: Composition-based stats. Identities = 63/332 (18%), Positives = 131/332 (39%), Gaps = 7/332 (2%) Query: 22 PCLLSEIEIELLSQLLKGYSVNEISKRRNRSIKTVS-CQKMKLYKKLNVKSDLTLWRDVF 80 P ++ +LL QL++ V SI S Q + K L +D+ + R Sbjct: 431 PQDAAKTAKKLLEQLIEPIHVQPNEIYLTASIGISSYPQDGESPKTLMSHADIAMTRAKS 490 Query: 81 LRFKAYLQ-PKNIICDNFNSSVLPVVSSKGESMAHYNIYYQPIYNAKNGNIAGCDVTIAL 139 Y + + L K + +YYQP + I G + + Sbjct: 491 EGKDRYQFFEREMTQTTKRVFELENDLRKAVARNELRVYYQPQIQLDSQQITGMEALVRW 550 Query: 140 KNSDGSAFALDSDRINYNPNDNKVSYLFGHINKLFSP----IKNNLPHGFFITININPED 195 ++ + +D I + + + + + + +N++P Sbjct: 551 QHPQRGLISP-ADFIPLAEETGLIVSIGEWVLRQACQQVAMWHDQGLPAVTVAVNLSPLQ 609 Query: 196 ILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSLRRIRNNNVYLSLNDFG 255 + R +K G L L+ + + I + +++ + L+++DFG Sbjct: 610 FRHKALVRNVAKTLKETGINPACLELEVTESMIMDSIDKSTATMIELTELGAGLAIDDFG 669 Query: 256 MGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSKQLHIDVIADGIETKK 315 GY+ LS+L+ P + + + K+ + S+ +AT++I L+ L++ V+A+GIE + Sbjct: 670 TGYSSLSYLRYFPLTKLKIDKSFIERVTSDEHDAALATSVIALAHSLNLKVVAEGIEHED 729 Query: 316 QAGYMIERGVKYLKGIALSSPLPADAFVRKLL 347 Q ++++R +G S P+PA+ + L Sbjct: 730 QVQFLVKRSCHQGQGFLFSRPVPAEDMEQLLR 761 >UniRef50_Q0ACK6 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Alkalilimnicola ehrlichii MLHE-1 RepID=Q0ACK6_ALHEH Length = 857 Score = 330 bits (848), Expect = 3e-89, Method: Composition-based stats. Identities = 55/325 (16%), Positives = 123/325 (37%), Gaps = 7/325 (2%) Query: 28 IEIELLSQLLKGYSVNEISKRRNRSIKTVSCQKMKLYKKLNVKSDLTLWRDVFLRFKAYL 87 I +L+ + + Y + E S+ + ++ + + T V + Sbjct: 523 IARQLVEGISRPYEITERPLVVTCSVGVAVHPRDGTRREALISAADTALHYVKAHGSNHY 582 Query: 88 QPKN--IICDNFNSSVLPVVSSKGESMAHYNIYYQPIYNAKNGNIAGCDVTIALKNSDGS 145 Q + L + + +YYQP+ + + + G + + + + Sbjct: 583 QFHEPGMTAAAAERLHLENDLREALLRGEFELYYQPVLDTERLTVCGAEALLRWHHPEAG 642 Query: 146 AFALDSDRINYNPNDNKVSYLFGHINKLFSPIKNNLPH----GFFITININPEDILTCDI 201 D I + + + + G +++N++ E ++ Sbjct: 643 LIPPD-RFIPLAEETGLIRPIGTWVLREACAQAARWRRLGLTGMTVSVNVSGEQFWRDEL 701 Query: 202 ERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSLRRIRNNNVYLSLNDFGMGYAEL 261 + ++ LVL+ + ++ ++ LR ++ V LSL+DFG GY+ L Sbjct: 702 PQAVRQALEAQALAPDALVLEITESVLMHGSANTETRLRELKAMGVGLSLDDFGTGYSSL 761 Query: 262 SHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSKQLHIDVIADGIETKKQAGYMI 321 S+L+ P + + K+ D+ + +A T+I + L + V+A+G+E+ + + Sbjct: 762 SYLKRFPIDTLKIDKSFVRDMVRDEHDRTLAQTVIAMGHGLGLQVVAEGVESAEHLPLLR 821 Query: 322 ERGVKYLKGIALSSPLPADAFVRKL 346 ++G S PLPA A R + Sbjct: 822 RARCDRVQGYHFSRPLPARALSRWI 846 >UniRef50_B7HSZ4 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor n=5 Tax=Bacillus cereus group RepID=B7HSZ4_BACC7 Length = 925 Score = 330 bits (848), Expect = 3e-89, Method: Composition-based stats. Identities = 61/341 (17%), Positives = 133/341 (39%), Gaps = 18/341 (5%) Query: 19 IEFPCLLSEIEIE-----LLSQLLKGYSVNEISKRRNRSIKT-VSCQKMKLYKKLNVKSD 72 I P + SE E+ ++ + + + + SI + + L +D Sbjct: 590 IYLPNIKSEKEVLKVVNRVIDSFSRPFHLVDNEIYMKTSIGISIFPDNGDTTEILVKNAD 649 Query: 73 LTLWRDVF---LRFKAYLQPKNIICDNFNSSVLPVVSSKGESMAHYNIYYQPIYNAKNGN 129 +++ + + + + F S L K IYYQP N K Sbjct: 650 TAMYKSKEISGSSYHFFSEGMDTR--TFESIKLENDLYKALEQEELVIYYQPQINGKTNK 707 Query: 130 IAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHI----NKLFSPIKNNLPHGF 185 I G + I + + D I + + + + + Sbjct: 708 IEGVEALIRWNHQEHGMIPPD-KFIPIAEETGLIVPIGEWVLKEACRQLKKWHDQGSPLI 766 Query: 186 FITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSLRRIRNN 245 +++N++ + D+ + ++ + L+ + + ++++++ Sbjct: 767 SMSVNLSARQLEQSDLFAMVKNVLEEVELSPKYIQLELTENLIVRNTESTLKTMKKLKGL 826 Query: 246 NVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSKQLHID 305 + L+++DFG GY+ L +L+ +P S + + K+ D+ + I TII L+K L++D Sbjct: 827 GINLAIDDFGTGYSSLGYLKKLPISTLKIDKSFVQDMTKD--DAAITNTIITLAKNLNLD 884 Query: 306 VIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKL 346 VIA+G+ETK+Q ++ R ++G S P+ A+ + Sbjct: 885 VIAEGVETKEQVEFLSARNCYLMQGYFFSRPMAAEDIEKLF 925 >UniRef50_Q47IA0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q47IA0_DECAR Length = 925 Score = 330 bits (848), Expect = 4e-89, Method: Composition-based stats. Identities = 59/339 (17%), Positives = 138/339 (40%), Gaps = 21/339 (6%) Query: 22 PCLLSEIEIELLSQLLKGYSVNEISKRRNRSIKT-VSCQKMKLYKKLNVKSDLTLWRDVF 80 P + + ++ ++ Y + R + SI V L +D+ + Sbjct: 566 PADAAHLADDITREISAPYLIKGQELRTSPSIGICVYPGDGSEIGDLLKNADVAM----- 620 Query: 81 LRFKAYLQPK---NIICDNFNSSVLPVV-----SSKGESMAHYNIYYQPIYNAKNGNIAG 132 + A + ++ N + + + + ++YQP + ++G I G Sbjct: 621 --YHAKANGRGNYQFFTEDMNIATTERMCLESDLRLAITRREFLLHYQPQLDLRSGTIVG 678 Query: 133 CDVTIALKNSDGSAFALDSDRINYNPNDNKVS----YLFGHINKLFSPIKNNLPHGFFIT 188 + I ++ + +D I ++ ++ + +N ++ Sbjct: 679 VEALIRWQHPTRGLVSP-ADFIPIAEESGMIAAIGDWVLEEACRQLKVWQNRGITHLRMS 737 Query: 189 ININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSLRRIRNNNVY 248 IN++ L + + RL L+ + + S ++ + ++ + Sbjct: 738 INLSAGQFLDKTLPARIHELLAANDLSADRLDLEVTESMSMASPDESISVMKTLSSSGLT 797 Query: 249 LSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSKQLHIDVIA 308 LS++DFG GY+ L++L+ +P + + ++ DIES+ I + L+ +L ++V+A Sbjct: 798 LSIDDFGTGYSSLAYLKLLPIHTLKIDRSFVKDIESDPNDADICDVTVLLAHKLGLEVVA 857 Query: 309 DGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLL 347 +G+ET+ Q +++ G + ++G +S PLPAD R + Sbjct: 858 EGVETEAQLKFLLSIGCEKVQGYLISKPLPADQAERFIR 896 >UniRef50_Q0F2A0 Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0F2A0_9PROT Length = 644 Score = 330 bits (848), Expect = 4e-89, Method: Composition-based stats. Identities = 62/350 (17%), Positives = 129/350 (36%), Gaps = 11/350 (3%) Query: 9 NLIDYDSIVNIEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIKT-VSCQKMKLYKKL 67 LI I ++ P L E + ++ Q Y + SI + + L Sbjct: 296 FLIIMPGIKDVHDPRFLCERILNMIGQ---PYLIGTQECFVGASIGISLYPLDGDNVESL 352 Query: 68 NVKSDLTLWRDVFLRFKAYLQPKNIICDN-FNSSVLPVVSSKGESMAHYNIYYQPIYNAK 126 +D +++ AY + + F + + + YQP Sbjct: 353 VKNADTAMYQAKDSGRNAYKFFTPAMGEEAFKRMEMERALRYAIEKNQFKLLYQPQVELS 412 Query: 127 NGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHI----NKLFSPIKNNLP 182 +G I G + + + + + S I+ N N + + + K + P Sbjct: 413 SGRILGVEALLRWTHPEWGPISP-SVFISLIENTNLILPIGEWVLDEACKQNKAWQALHP 471 Query: 183 -HGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSLRR 241 + +N D+ ++ G L L+ + + I ++ Sbjct: 472 GFPLRMAVNFAARQFAQADLVETVAKALQKSGLAAEFLELEITEGSAMNDIELNIRKMQA 531 Query: 242 IRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSKQ 301 ++ V ++++DFG G++ L++L+ P + + K+ +I+ I TI +++ Sbjct: 532 LKELGVSIAIDDFGTGFSSLAYLKRFPIDILKIDKSFLDEIQHGKKDAAIVATISEMAHS 591 Query: 302 LHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLLASLK 351 L ++VIA+G+ETK Q ++ G ++G S P+P + L K Sbjct: 592 LGMEVIAEGVETKYQLEFLRGHGCDMIQGYLFSRPVPPEQIAEILQKGGK 641 >UniRef50_C4XRM5 Putative signaling protein n=1 Tax=Desulfovibrio magneticus RS-1 RepID=C4XRM5_DESMR Length = 821 Score = 330 bits (848), Expect = 4e-89, Method: Composition-based stats. Identities = 51/314 (16%), Positives = 122/314 (38%), Gaps = 8/314 (2%) Query: 34 SQLLKGYSVNEISKRRNRSIKTVSCQKM-KLYKKLNVKSDLTLWRDVFLRFKAYLQPKNI 92 + L K + + S+ V + + + + +D+ ++R + + + + Sbjct: 492 AALGKPCMLCGTTVTPGASVGIVLRTRDYQSPEDILRDADIAMYRAKESGRPSMIFDRRM 551 Query: 93 ICDNFNSSVLPVVSSKGESMAHYNIYYQPIYNAKNGNIAGCDVTIALKNSDGSAFALDSD 152 + ++ L ++YQPI + + G I G + + + D Sbjct: 552 HQEILDAINLEADLRAALDRGELLLHYQPIVDVQTGRIEGFEALVRWDHPDRG-LVPPVQ 610 Query: 153 RINYNPNDNKVSYL----FGHINKLFSPIKNNLPHG--FFITININPEDILTCDIERECL 206 I + L + + LP +++N++ + + Sbjct: 611 FIPLAEETGLIQPLGRFVIAEACRQLRAWQLELPEAEQLSVSVNVSCHQFVKEGLVDHVA 670 Query: 207 HFIKVFGTERIRLVLQFSTKEELYIIRRYQSSLRRIRNNNVYLSLNDFGMGYAELSHLQN 266 ++ G + L L+ + ++ + L R++ V ++++DFG GY+ LS+L+ Sbjct: 671 GVLETTGLDPACLKLEITESVLMHDAQHTAGELSRLKALGVKIAIDDFGTGYSSLSYLRQ 730 Query: 267 IPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSKQLHIDVIADGIETKKQAGYMIERGVK 326 +P ++ + ++ + N + I +II L++ L + VIA+G+E + Q + Sbjct: 731 LPIDHLKIDRSFISGDDVNGESQEIVKSIIALARSLGLTVIAEGVEHQDQLDKLRNADCD 790 Query: 327 YLKGIALSSPLPAD 340 +G S P+ D Sbjct: 791 KAQGFMFSRPVDKD 804 >UniRef50_B8DLV2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfovibrio vulgaris str. 'Miyazaki F' RepID=B8DLV2_DESVM Length = 896 Score = 330 bits (848), Expect = 4e-89, Method: Composition-based stats. Identities = 62/331 (18%), Positives = 126/331 (38%), Gaps = 17/331 (5%) Query: 27 EIEIELLSQLLKGYSVNEISKRRNRSIKT-VSCQKMKLYKKLNVKSDLTLWRDV------ 79 ++ LL++ V E S+ + L +D+ + R Sbjct: 556 QVAERLLARFTDPVRVQEHELFVGASVGIALFPDDGDDPDTLVRNADIAMSRAKEQGKRR 615 Query: 80 FLRFKAYLQPKNIICDNFNSSVLPVVSSKGESMAHYNIYYQPIYNAKNGNIAGCDVTIAL 139 + F + + + + + + +YQP + G I G + Sbjct: 616 YHLFTPAMNDRAVRRLSLEGD-----LHRALAAGDITAHYQPRVDLNTGLITGMEALARW 670 Query: 140 KNSDGSAFALDSDRINYNPNDNKVSYLFGHINKLFSPIKNNLPH----GFFITININPED 195 +DGS ++ I + + L H+ +L L + +N++ Sbjct: 671 IRADGSQ-EHPAEFIPLAESTGLIVPLGEHMLRLACAKTRALCDAGHADLHVAVNLSVHQ 729 Query: 196 ILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSLRRIRNNNVYLSLNDFG 255 ++ + G L L+ + + + L ++ + LS++DFG Sbjct: 730 FRHRNLVGMVADVLAETGLPPHLLELEITESTIVTDVDHTIRKLNQLAEMGIALSVDDFG 789 Query: 256 MGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSKQLHIDVIADGIETKK 315 GY+ L L+N+P + + + ++ DI + IA TII ++ +L + V+A+G+ET + Sbjct: 790 TGYSSLYQLKNLPLTSLKIDRSFIRDIPDDPNDAAIAATIITMADRLGLRVVAEGVETPE 849 Query: 316 QAGYMIERGVKYLKGIALSSPLPADAFVRKL 346 Q +++ G ++G S PLP D F L Sbjct: 850 QLNFLLLEGCHEVQGFLFSRPLPPDEFTALL 880 >UniRef50_C5UZT1 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Gallionella ferruginea ES-2 RepID=C5UZT1_9PROT Length = 1301 Score = 330 bits (847), Expect = 4e-89, Method: Composition-based stats. Identities = 49/308 (15%), Positives = 118/308 (38%), Gaps = 17/308 (5%) Query: 52 SIKT-VSCQKMKLYKKLNVKSDLTLWRDV------FLRFKAYLQPKNIICDNFNSSVLPV 104 SI + + KL +D+ ++R F F + +Q ++ +L Sbjct: 995 SIGIAMYPSDGMDFDKLYQSADVAMYRAKQDGRNNFRFFTSEMQARSA-----RRLLLEN 1049 Query: 105 VSSKGESMAHYNIYYQPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVS 164 + S + ++YQP + ++G I G + + + + + + ++ I + Sbjct: 1050 ALRQALSRNQFELHYQPQISMQDGKIVGAEALLRWYHPELGSISP-AEFIPVAEESGLIL 1108 Query: 165 YLFGHINK----LFSPIKNNLPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLV 220 + + + ++ + IN++ + + + + Sbjct: 1109 SIGEWVLRTAVQQVKRWQDAGHPPVTVAINLSAVQFRQARLSELVMQILHEANLAPHWIE 1168 Query: 221 LQFSTKEELYIIRRYQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFH 280 L+ + + + + + +S++DFG GY+ LS+L+ + + + ++ Sbjct: 1169 LELTESVAMDNPLVAIGVMNDLHGCGIRMSIDDFGTGYSSLSYLRKFKVNKLKIDQSFVR 1228 Query: 281 DIESNSLTDIIATTIIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPAD 340 D+ + + I T II L+ + IA+G+ET Q ++ +G ++G S PL Sbjct: 1229 DLADDIESRAIVTAIITLASSMGFQTIAEGVETAGQLAFLRLQGCNEVQGYYFSRPLTVA 1288 Query: 341 AFVRKLLA 348 F +L Sbjct: 1289 LFEAFVLG 1296 >UniRef50_C6D8Q9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D8Q9_PAESJ Length = 633 Score = 330 bits (847), Expect = 4e-89, Method: Composition-based stats. Identities = 62/358 (17%), Positives = 136/358 (37%), Gaps = 14/358 (3%) Query: 1 MNTIKIKLNLIDYDSIVNIEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIKTV-SCQ 59 M + L L D IE L E+ +L + + + + S+ V S Sbjct: 284 MEGDEFALLLQD------IESEEQLMELSRGMLHAIDEPFELKGFPLHITGSLGAVTSLV 337 Query: 60 KMKLYKKLNVKSDLTLWRDVFLRFK-AYLQPKNIICDNFNSSVLPVVSSKGESMAHYNIY 118 K L K+D+ L + L ++ +F L + + + Sbjct: 338 KEDDGYSLLKKADIALVKVKESGKNDCMLYSESWSNSSFERLTLQHEMYRAIQRKEFILL 397 Query: 119 YQPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHI----NKLF 174 YQP Y+ +G + G + + ++ + I + + + + Sbjct: 398 YQPQYDLVSGMMVGVEALVRWRHPAKGMI-PPGEFIPIAEESGMIVQIGDWVLEEACRQN 456 Query: 175 SPIKNNLPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRR 234 ++ +++N++ + D+ + ++ G + L L+ + + Sbjct: 457 KAWQDAGLPPMPVSVNLSIRQFVQQDLASKVASVLEKTGLKPEYLDLEITESMTM-DTGH 515 Query: 235 YQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATT 294 L + + V +S++DFG GY+ +L+N P + + ++ DI+ + I Sbjct: 516 VSRCLLELTDMGVGISVDDFGTGYSSFHYLKNFPIDRLKIDRSFVRDIQQDPSDAEIVAA 575 Query: 295 IIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLLASLKQ 352 II ++ L+I VIA+G+E +Q ++ + ++G S P+ + + L A+ Q Sbjct: 576 IIAMAHNLNIQVIAEGVENAEQMEFLRKHNCDEMQGYFWSPPVSSTDIEQMLGAAYIQ 633 >UniRef50_Q60BD0 Sensory box protein n=1 Tax=Methylococcus capsulatus RepID=Q60BD0_METCA Length = 1214 Score = 330 bits (847), Expect = 4e-89, Method: Composition-based stats. Identities = 62/330 (18%), Positives = 134/330 (40%), Gaps = 18/330 (5%) Query: 35 QLLKGYSVNEISKRRNRSIKTVSCQKMK-LYKKLNVKSDLTLW------RDVFLRFKAYL 87 L + +++ + SI + + ++D ++ RD +++ + Sbjct: 892 LLSAPFQLDDYVHYISVSIGIALFPDGANTAEDVLKQADTAMYVAKNEGRDGVRFYESAM 951 Query: 88 QPKNIICDNFNSSVLPVVSSKGESMAHYNIYYQPIYNAKNGNIAGCDVTIALKNSDGSAF 147 + L K + + +YYQP +G + G + I + + A Sbjct: 952 E-----AVVRGRLELEKALRKALANDEFEVYYQPQM-LGDGRVVGAEALIRWFHPERGAI 1005 Query: 148 ALDSDRINYNPNDNKVSYLFGHINKLFSPIKNNLP-HGF---FITININPEDILTCDIER 203 + D I + + + + + + G +++N++P + D+ Sbjct: 1006 SPD-QFIPVCEQNGMILRVGAIVLRRACACLAEIRARGLALPKLSVNVSPRQFMRSDLMT 1064 Query: 204 ECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSLRRIRNNNVYLSLNDFGMGYAELSH 263 + F G L L+ + L + + R++N V S++DFG GY+ L++ Sbjct: 1065 QLEQFCLENGVSPTDLCLELTEGVLLNHTELAVAQIGRLKNLGVSFSIDDFGTGYSSLAY 1124 Query: 264 LQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSKQLHIDVIADGIETKKQAGYMIER 323 L+++P + + D+E +S I TI+ +++ L +DVIA+G+ET+ Q + Sbjct: 1125 LKHLPLDDLKIASAFVRDLEQDSSDAAIVETIVSMARHLGLDVIAEGVETRTQVEILERY 1184 Query: 324 GVKYLKGIALSSPLPADAFVRKLLASLKQV 353 G +G + PLP D F+R + ++ Sbjct: 1185 GCHRFQGNYFARPLPKDDFIRFVAERQRRA 1214 >UniRef50_A0L8C6 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Bacteria RepID=A0L8C6_MAGSM Length = 720 Score = 330 bits (847), Expect = 4e-89, Method: Composition-based stats. Identities = 54/331 (16%), Positives = 126/331 (38%), Gaps = 17/331 (5%) Query: 28 IEIELLSQLLKGYSVNEISKRRNRSIK-TVSCQKMKLYKKLNVKSDLTLW------RDVF 80 + E+L+++ + +++E+ SI TV + L ++ ++ R+ F Sbjct: 383 LAQEVLTRVAQPITISEVEFAVGASIGMTVYPLDGEKPSVLMRNAESAMYHAKQSGRNNF 442 Query: 81 LRFKAYLQPKNIICDNFNSSVLPVVSSKGESMAHYNIYYQPIYNAKNGNIAGCDVTIALK 140 +++ L ++ +L + ++YQP G + G + I + Sbjct: 443 QFYRSELNTASL-----ARILLESGLRNAVDRQEFLLFYQPQMELATGKLIGMEALIRWQ 497 Query: 141 NSDGSAFALDSDRINYNPNDNKVSYLFGHINKLFSP----IKNNLPHGFFITININPEDI 196 + + + + I V + K + I++N++ Sbjct: 498 HPEQGMVSP-GEFIPLAEETGLVIPMGQWALKEACRQSKVWMDQTGVPLRISVNLSGIQF 556 Query: 197 LTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSLRRIRNNNVYLSLNDFGM 256 D + + G L L+ + + + L + V L+++DFG Sbjct: 557 RLPDFTEMVMRTVGESGLPPHCLELELTESIAMGDVEETLEKLTILSRFGVLLAIDDFGT 616 Query: 257 GYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSKQLHIDVIADGIETKKQ 316 G++ LS+L+ P + + ++ + + I I+L+ L+++VIA+G+E +Q Sbjct: 617 GFSSLSYLKKFPIDTLKIDQSFVRNCTRDPEDAAIIRAFINLAHSLNLEVIAEGVEHLEQ 676 Query: 317 AGYMIERGVKYLKGIALSSPLPADAFVRKLL 347 ++ + ++G PL D F +L Sbjct: 677 LEFLAQESCDEIQGYFYGRPLSGDKFEMFML 707 >UniRef50_D2L724 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfovibrio sp. FW1012B RepID=D2L724_9DELT Length = 827 Score = 330 bits (847), Expect = 5e-89, Method: Composition-based stats. Identities = 50/311 (16%), Positives = 116/311 (37%), Gaps = 8/311 (2%) Query: 36 LLKGYSVNEISKRRNRSIKTVSCQKM-KLYKKLNVKSDLTLWRDVFLRFKAYLQPKNIIC 94 L K + + + SI V + L +D+ ++R + + + + Sbjct: 505 LGKPFVLCGKTVTPEASIGIVLHTRDYAAADDLLRDADIAMYRAKEQGRASMIFDRKMHQ 564 Query: 95 DNFNSSVLPVVSSKGESMAHYNIYYQPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRI 154 + + L + ++YQPI + K+ I G + + + D I Sbjct: 565 EILEAISLETDLRQALEAGELLLHYQPIVDVKDSRIVGFEALVRWDHPDRG-LVPPGQFI 623 Query: 155 NYNPNDNKV----SYLFGHINKLFSPIKNNLPH--GFFITININPEDILTCDIERECLHF 208 + ++ + + +P +++N++ + + Sbjct: 624 PLAEETGLILPLGRFVIDEACRQLRAWQLEMPEAADLSVSVNVSCRQFVKDGLVEHVAQV 683 Query: 209 IKVFGTERIRLVLQFSTKEELYIIRRYQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIP 268 + G L L+ + ++ L R++ V ++++DFG GY+ LS+L+ +P Sbjct: 684 LAATGLPPACLKLEITESVLMHDAEHTARELNRLKALGVKIAIDDFGTGYSSLSYLRQLP 743 Query: 269 FSYVNLHKTMFHDIESNSLTDIIATTIIDLSKQLHIDVIADGIETKKQAGYMIERGVKYL 328 ++ + ++ + + I +II L++ L + VIA+G+E Q + Sbjct: 744 IDHLKIDRSFISGQGCDGESQEIVKSIISLARSLGLTVIAEGVECPDQLDRLRLADCDKA 803 Query: 329 KGIALSSPLPA 339 +G S P+ A Sbjct: 804 QGFMFSRPVEA 814 >UniRef50_Q2YCL1 Diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(S) n=2 Tax=Nitrosospira multiformis ATCC 25196 RepID=Q2YCL1_NITMU Length = 1054 Score = 330 bits (847), Expect = 5e-89, Method: Composition-based stats. Identities = 60/328 (18%), Positives = 134/328 (40%), Gaps = 10/328 (3%) Query: 25 LSEIEIELLSQLLKGYSVNEISKRRNRSIKTVSCQK-MKLYKKLNVKSDLTLWRDVFLRF 83 +S I + S ++ ++++ SI + +L ++DL +++ Sbjct: 721 ISTICERIRSAFIQPFNLDPYIHHITPSIGIALFNDQSQTTNELLKRADLAMYQAKASGR 780 Query: 84 KAYLQPKNIICDNFN-SSVLPVVSSKGESMAHYNIYYQPIYNAKNGNIAGCDVTIALKNS 142 A + N ++L K + ++YQ +++ I G + + ++ Sbjct: 781 NAMRFFDPDMQAAMNARAILESELYKSWERNEFILHYQLQVDSRG--IIGAEALVRWQHP 838 Query: 143 DGSAFALDSDRINYNPNDNKVSYLFGHI-----NKLFSPIKNNLPHGFFITININPEDIL 197 S+ I + L + N+L S +++N++ Sbjct: 839 RRGLL-PPSEFIPQAEETGLILPLGEWVLETACNQLASWALQPETVQLNLSVNVSSLQFC 897 Query: 198 TCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSLRRIRNNNVYLSLNDFGMG 257 D + + + G RL L+ + ++ + + + ++ V +L+DFG+G Sbjct: 898 QPDFVEQVISILDRTGANPQRLKLELTESILVHDMDDTIAKMMTLKARGVGFALDDFGIG 957 Query: 258 YAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSKQLHIDVIADGIETKKQA 317 Y+ L +L+ +P +V + ++ D+ +++ I TI+ L+K + + VIA+G+ET Q Sbjct: 958 YSSLYYLKRLPLDWVKIDRSFVRDVLTDNNDATIVRTILLLAKSMGLAVIAEGVETGAQK 1017 Query: 318 GYMIERGVKYLKGIALSSPLPADAFVRK 345 ++ G +G S PLP + F R Sbjct: 1018 DFLASHGCTAYQGYLFSRPLPLEQFERF 1045 >UniRef50_B4SHZ4 Diguanylate cyclase/phosphodiesterase n=26 Tax=Bacteria RepID=B4SHZ4_STRM5 Length = 710 Score = 330 bits (847), Expect = 5e-89, Method: Composition-based stats. Identities = 62/350 (17%), Positives = 139/350 (39%), Gaps = 7/350 (2%) Query: 2 NTIKIKLNLIDYDSIVNIEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIKTVSCQKM 61 N + +L ++ +V IE L + +L + G + + + SI C Sbjct: 341 NDMLARLGGDEFVLVVRIEHDEDLPTLARRILQAVGSGPLLADNELQVTASIGVAICPDH 400 Query: 62 KLYKK-LNVKSDLTLWRDVFLRFKAYLQPKNIICDNFNSSVLPVV-SSKGESMAHYNIYY 119 ++ L +D +++ A++ + + D+ + + + Y Sbjct: 401 AASERQLMAFADAAMYQAKESGRNAFVLFADWMNDSAEQQFRLLADLRRAIGSEQLFLNY 460 Query: 120 QPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHI----NKLFS 175 QP +AG + I ++ + D I ++ + Sbjct: 461 QPKIRVATQKVAGAEALIRWRHPEHGLIPPD-RFIRLAERSGAINDIGRWALDQACLQLR 519 Query: 176 PIKNNLPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRY 235 + G+ +++N++P + + ++ I+ + LVL+ + + Sbjct: 520 RWHDAGHEGWSMSVNLSPVQFSSPHLLQDVREVIERYNIAPRHLVLEITESTVMRDTDTS 579 Query: 236 QSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTI 295 L+ + V +S++DFG GY+ L +L+ +P + + + D+E ++ +I + I Sbjct: 580 LRLLQALSALGVGISIDDFGTGYSSLLYLKRLPATEIKIDHAFVRDLEHSAEDVVIVSAI 639 Query: 296 IDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRK 345 + L L +D++A+G+ET Q Y+ G YL+G L P+ A F++ Sbjct: 640 VALGHALDMDIVAEGVETAAQRAYLERLGCDYLQGYLLGRPVDAARFMQL 689 >UniRef50_B8GL67 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GL67_THISH Length = 685 Score = 330 bits (847), Expect = 5e-89, Method: Composition-based stats. Identities = 64/355 (18%), Positives = 147/355 (41%), Gaps = 25/355 (7%) Query: 5 KIKLNLIDYDSIVNIEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIK-TVSCQKMKL 63 + + L D ++E EI +L+S++ + Y + E + SI T+ + Sbjct: 333 EFTVILSDLTGKAHVE------EIAQKLISRVAEPYYLREGVAHISASIGITLYPGDAED 386 Query: 64 YKKLNVKSDLTLW------RDVFLRFKAYLQPKNIICDNFNSSVLPVVSSKGESMAHYNI 117 +L +D ++ R+ F F LQ L + + + Sbjct: 387 MGELMKHADQAMYSAKRLGRNRFCYFTHALQEAAQ-----KRLRLSRELRQAVNQGQFEA 441 Query: 118 YYQPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVS----YLFGHINKL 173 ++QPI +G I + + + + ++ I + + ++F + Sbjct: 442 HFQPIVELASGRIQKAEALLRWHHPERGLVGP-AEFIPLAEDTGLIEGVGDWVFREAVRR 500 Query: 174 FSPIKNNLPHGFFITININPEDILTCDI--ERECLHFIKVFGTERIRLVLQFSTKEELYI 231 ++ +++N++P + L+ ++ G ++V++ + L+ Sbjct: 501 ARVWRDRFGTDIQVSVNMSPLQFRSEGAERVESWLYHLEEMGVRGEQIVIEITENLLLHA 560 Query: 232 IRRYQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDII 291 L R R+ + ++++DFG GY LS+L+ P Y+ + ++ ++E++ + Sbjct: 561 HDEVTRQLFRFRDAGIQIAIDDFGTGYCTLSYLKQFPIDYLKIDRSFVRNLENDPNDVAL 620 Query: 292 ATTIIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKL 346 + II ++ +L + VIA+G+ET+ Q + + G + +G + LPA+ F L Sbjct: 621 SKAIIVMAHELGLKVIAEGVETEGQRRLLSDAGCDFAQGYLFARALPAEDFEDLL 675 >UniRef50_B2UIB3 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=8 Tax=Ralstonia RepID=B2UIB3_RALPJ Length = 916 Score = 330 bits (846), Expect = 6e-89, Method: Composition-based stats. Identities = 54/332 (16%), Positives = 118/332 (35%), Gaps = 7/332 (2%) Query: 28 IEIELLSQLLKGYSVNEISKRRNRSIK-TVSCQKMKLYKKLNVKSDLTLWRDVFLRFK-A 85 + LL + + + SI + L +D ++R A Sbjct: 577 LAERLLQAMREPFDTVNGRYYLGVSIGVALYPHDGISGSDLLRSADAAMYRAKQNGRNRA 636 Query: 86 YLQPKNIICDNFNSSVLPVVSSKGESMAHYNIYYQPIYNAKNGNIAGCDVTIALKNSDGS 145 + +L + YQP Y+ + I G + + ++ Sbjct: 637 QFYTAELNARLQRRYMLENALRDARENNELQLVYQPKYDLASHRIVGAEALLRWNSAKLG 696 Query: 146 AFALDSDRINYNPNDNKVSYLFGHINKLFSP----IKNNLPHGFFITININPEDILTCDI 201 A + + I + + + + L + F + +N++ D+ Sbjct: 697 AISP-VEFIPVAEETGLIVPIGAWVLRRACEQAVIWYEALGYDFRMAVNLSARQFQAGDV 755 Query: 202 ERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSLRRIRNNNVYLSLNDFGMGYAEL 261 + G L ++ + + + + + +S++DFG GY+ L Sbjct: 756 VPMIEQTLADSGLPPTALEVEITESLLMGGADEVRPMFDALTAQGIRISIDDFGTGYSSL 815 Query: 262 SHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSKQLHIDVIADGIETKKQAGYMI 321 S+LQ P S V + ++ I + + + I+ +++ L + V A+G+E Q ++ Sbjct: 816 SYLQRFPISNVKIDRSFITGIPHDPDSVALTEAIVAMARALGMTVTAEGVEDADQVEFLA 875 Query: 322 ERGVKYLKGIALSSPLPADAFVRKLLASLKQV 353 + G + ++G + P+ A+ F R L A L V Sbjct: 876 KAGCQEIQGYYIGKPVTAEGFDRLLRAHLSVV 907 >UniRef50_Q0A5U6 Periplasmic sensor diguanylate cyclase/phosphodiesterase n=1 Tax=Alkalilimnicola ehrlichii MLHE-1 RepID=Q0A5U6_ALHEH Length = 802 Score = 330 bits (846), Expect = 6e-89, Method: Composition-based stats. Identities = 58/345 (16%), Positives = 136/345 (39%), Gaps = 11/345 (3%) Query: 9 NLIDYDSIVNIEFPCLLSEIEIELLSQLLKGYSVNEI-SKRRNRSIK-TVSCQKMKLYKK 66 ++ D I ++E + + ELL + + +SV S + SI ++ + + Sbjct: 452 FIVLLDGISDLEL---VDQQARELLELVAESFSVGGWRSLQVGGSIGISLFPDNAQDASE 508 Query: 67 LNVKSDLTLWRDVFLRFKAY-LQPKNIICDNFNSSVLPVVSSKGESMAHYNIYYQPIYNA 125 L ++D ++ Y +++ + + H ++YQP + Sbjct: 509 LITQADAAMYLAKAEGRNTYRYYNQSLTAAASERLETETRLRRALELDHLEVFYQPQLDI 568 Query: 126 KNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINK----LFSPIKNNL 181 G + G + + ++ + D I + L + + + + Sbjct: 569 TTGALTGVEALVRWRDPEQGLIPPD-RFIPVAEETGLIDRLGQQVLERACLQVAAWDRDG 627 Query: 182 PHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSLRR 241 + +N++ I + + H ++ G RLVL+ + + +L Sbjct: 628 LPALDVAVNLSAHQIGDPRLCAKIRHALERSGLAPRRLVLEITESTLMTQAEGALGTLAG 687 Query: 242 IRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSKQ 301 ++ V ++++DFG GY+ L++L+ ++ + + D+ + + TI+ ++ Sbjct: 688 LKGLGVQVAIDDFGTGYSSLAYLKRFAIDWLKVDRCFVQDLPEDRNDAELTQTIVYMAHN 747 Query: 302 LHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKL 346 L + V+A+G+ET+ Q ++ G +G S PLP V +L Sbjct: 748 LGLRVLAEGVETQAQLDFLTHLGCDGWQGFLCSPPLPPQELVARL 792 >UniRef50_C7RK65 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RK65_9PROT Length = 1327 Score = 330 bits (846), Expect = 6e-89, Method: Composition-based stats. Identities = 58/335 (17%), Positives = 131/335 (39%), Gaps = 9/335 (2%) Query: 22 PCLLSEIEIELLSQLLKGYSVNEISKRRNRSIK-TVSCQKMKLYKKLNVKSDLTLWRDVF 80 P +S I ++L+ L E SI +V Q + L +D+ ++R Sbjct: 995 PTAVSHIAEKILNVLQASPVTVEHEFFVGASIGISVFPQDGADAETLMKNADVAMYRAKE 1054 Query: 81 LRFKAYLQP-KNIICDNFNSSVLPVVSSKGESMAHYNIYYQPIYNAKNGNIAGCDVTIAL 139 Y K++ + + + +Y QP ++ G + G + + Sbjct: 1055 RGRNTYEFFTKDLTQTSLARLQMETDLRRAIERGELRVYLQPQFSLATGKVVGAEALVRW 1114 Query: 140 KNSDGSAFALDSDRINYNPNDNKVSYLFGHI-----NKLFSPIKNNLPHGFFITININPE 194 L + I + + + + + + L G +++N++ Sbjct: 1115 LRPQQG-LVLPGEFIKLAEESGLIVPIGEWVQGTAACQWATWVAAGLAPGV-LSVNVSGV 1172 Query: 195 DILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSLRRIRNNNVYLSLNDF 254 + I++ +++ G L L+ + + L +R + L ++DF Sbjct: 1173 EFARGRIQQTARRTLELSGLPARFLELEITESAIMSHAENSVQVLDNLRAMGISLVIDDF 1232 Query: 255 GMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSKQLHIDVIADGIETK 314 G GY+ L++L+ +P + + + ++ + +++ IA +I L L + VIA+G+ET+ Sbjct: 1233 GTGYSSLAYLKRLPLNKLKVDQSFVRGLPNDTEDCAIARAVIALGHSLQLTVIAEGVETE 1292 Query: 315 KQAGYMIERGVKYLKGIALSSPLPADAFVRKLLAS 349 Q ++ G ++G P+P D + + L+ Sbjct: 1293 AQREFLTGEGCDEMQGYLRGRPMPFDDYHARFLSG 1327 >UniRef50_A7BQZ3 Sensory box/GGDEF family protein n=1 Tax=Beggiatoa sp. PS RepID=A7BQZ3_9GAMM Length = 576 Score = 330 bits (846), Expect = 6e-89, Method: Composition-based stats. Identities = 58/333 (17%), Positives = 126/333 (37%), Gaps = 7/333 (2%) Query: 25 LSEIEIELLSQLLKGYSVNEISKRRNRSIK-TVSCQKMKLYKKLNVKSDLTLWRDVFLRF 83 +SE+ LL L + ++ SI +V + L +D + R Sbjct: 238 VSEMAQGLLDNLSRSMVIDHHEMVVTASIGISVYPSDGEEAAILLKNADTAMARAKAAGK 297 Query: 84 KAYLQPKNIICDN-FNSSVLPVVSSKGESMAHYNIYYQPIYNAKNGNIAGCDVTIALKNS 142 Y K + F +L K S +YYQP +G + G + + ++ Sbjct: 298 NTYQFFKAEMNKAAFERLMLENQLRKVLSNNELILYYQPQIELSSGQLVGMEALLRWQHP 357 Query: 143 DGSAFALDSDRINYNPNDNKVSYLFGHINKLFSPIKNNLPH----GFFITININPEDILT 198 + + + + + + +++N++ Sbjct: 358 EFG-ICSPVKFVPVAEEMGLIVPIGEWVLRTACQQNQTWQQLGFPPVRVSVNVSSRQFFR 416 Query: 199 CDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSLRRIRNNNVYLSLNDFGMGY 258 ++ + + I L L+ + + L ++N V+++++DFG GY Sbjct: 417 DNLLQIIKEALADSNLNPIYLELELTESVLMAEESGIFELLTEVQNMGVHIAIDDFGTGY 476 Query: 259 AELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSKQLHIDVIADGIETKKQAG 318 + LS+L+ P + + ++ DI S+ I T II ++ L + V+A+G+ET+ Q Sbjct: 477 SSLSYLKRFPLDVLKIDRSFVKDICSDGNDAAITTAIIAMAHSLGLSVVAEGVETQGQLT 536 Query: 319 YMIERGVKYLKGIALSSPLPADAFVRKLLASLK 351 ++ ++ ++G S P+ ++ + L K Sbjct: 537 FLQQQHCDVIQGYYFSRPICSEKMTQTLQRISK 569 >UniRef50_Q31GH8 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=3 Tax=cellular organisms RepID=Q31GH8_THICR Length = 1466 Score = 329 bits (845), Expect = 7e-89, Method: Composition-based stats. Identities = 63/330 (19%), Positives = 131/330 (39%), Gaps = 17/330 (5%) Query: 28 IEIELLSQLLKGYSVNEISKRRNRSIKT-VSCQKMKLYKKLNVKSDLTLW------RDVF 80 + ++L + ++ SI V Q K L +D ++ R+V+ Sbjct: 1137 VAEKILESISDQLNLKPYKLFITPSIGIAVYPQDGKDADSLLKNADTAMYQAKNDGRNVY 1196 Query: 81 LRFKAYLQPKNIICDNFNSSVLPVVSSKGESMAHYNIYYQPIYNAKNGNIAGCDVTIALK 140 F +Q + + + +YYQP AK+G+I G + I Sbjct: 1197 RFFTMEMQAHSSRIM-----QIESALRVALFDQQFELYYQPQTCAKSGSIIGVEALIRWN 1251 Query: 141 NSDGSAFALDSDRINYNPNDNKVSYLFGHINK-LFSPIKNNLPHG---FFITININPEDI 196 + + + + I ++ + + + IK HG + +N++ Sbjct: 1252 HPEMGPVSP-QEFIPVAEQSGQILAIGWWVLRTAIRQIKIWSEHGKPCIKVAVNLSAVQF 1310 Query: 197 LTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSLRRIRNNNVYLSLNDFGM 256 D+ ++ + ++ G L L+ + + + ++ + + +S++DFG Sbjct: 1311 RYEDLPKQVMKILEEEGVSPEFLELELTESVAMANPEAVIEMMDKLVGHGIKMSIDDFGT 1370 Query: 257 GYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSKQLHIDVIADGIETKKQ 316 GY+ LS+L+ S + + ++ D+ +S I II LSK L + IA+G+ET+ Q Sbjct: 1371 GYSSLSYLKRFKVSKLKIDQSFIRDLAVDSDDRSIIEAIISLSKALGLKTIAEGVETQAQ 1430 Query: 317 AGYMIERGVKYLKGIALSSPLPADAFVRKL 346 ++ E+ ++G S L +AF Sbjct: 1431 LDFLQEKQCDEIQGFYYSKALTPEAFDAFY 1460 >UniRef50_Q31NI4 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Synechococcus elongatus RepID=Q31NI4_SYNE7 Length = 929 Score = 329 bits (845), Expect = 7e-89, Method: Composition-based stats. Identities = 58/338 (17%), Positives = 146/338 (43%), Gaps = 7/338 (2%) Query: 16 IVNIEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIK-TVSCQKMKLYKKLNVKSDLT 74 +V+++ + I LL+ + + Y + I S+ T+S ++ +L ++DL Sbjct: 585 LVDLKLENDVISIADRLLASVARPYHIQGIYLHVTASMGITLSDGDIEQPTQLIQQADLA 644 Query: 75 LWRDVFLRFKAYLQPKNIICDNFNSSV-LPVVSSKGESMAHYNIYYQPIYNAKNGNIAGC 133 +++ Y N + V L K + +Y+QP +G + G Sbjct: 645 MYKAKQEGRNNYQWYTNDLNLRLRERVHLRNELQKAIETEAFELYFQPKIEGCSGQVIGL 704 Query: 134 DVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINK-LFSPIKNNLPHGF---FITI 189 + + ++ + + + + ++ L + + +++ L G + + Sbjct: 705 EALLRWQHPQMGFISP-ATFVPIAEDTGQIIPLSQWVLETACRQLRDLLQQGIAAPSVAV 763 Query: 190 NINPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSLRRIRNNNVYL 249 NI+ + + ++ + + L ++ + + L+R++ V + Sbjct: 764 NISTVQFRRINFVKSVQSALQKYQLKSEHLEIEITENVLFDNTEKAIEKLQRLKELGVNI 823 Query: 250 SLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSKQLHIDVIAD 309 S++DFG G++ LS+L+ +P V + ++ +I ++S I II ++ L ++V+A+ Sbjct: 824 SIDDFGTGFSSLSYLKELPIDTVKIDRSFVQEINTDSRDAAITQGIISMAHHLRLNVVAE 883 Query: 310 GIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLL 347 G+ET++Q ++ + +G + P+P +A + L+ Sbjct: 884 GVETEQQFKFLQQSNCDQYQGYYFAKPMPFEALKQYLM 921 >UniRef50_C4L753 Diguanylate cyclase/phosphodiesterase with PAS/PAC and MHYT sensor(S) n=1 Tax=Exiguobacterium sp. AT1b RepID=C4L753_EXISA Length = 819 Score = 329 bits (845), Expect = 7e-89, Method: Composition-based stats. Identities = 60/323 (18%), Positives = 128/323 (39%), Gaps = 12/323 (3%) Query: 29 EIELLSQLLKGYSVNEISKRRNRSIK-TVSCQKMKLYKKLNVKSDLTLWR---DVFLRFK 84 EL++ L + + SI ++ ++L +D+ ++R D ++ Sbjct: 489 AQELINVLHPPFELENEEVFTGASIGISLHPSDGDTAEELIKNADIAMYRAKADGKNGYQ 548 Query: 85 AYLQPKNIICDNFNSSVLPVVSSKGESMAHYNIYYQPIYNAKNGNIAGCDVTIALKNSDG 144 + N S L + KG + ++YQP + + G + + + + Sbjct: 549 FFTNELNESVS--RRSNLSMALRKGIGRGEFTVHYQPQIQLETEMVIGMEALVRWNHPEL 606 Query: 145 SAFALDSDRINYNPNDNKVSYLFGHI----NKLFSPIKNNLPHGFFITININPEDILTCD 200 + + I + L + + ++ F + +NI+ D Sbjct: 607 GMISP-GEFIPIAEETGSIHRLGEFVLNEACRQNKAWQDASIPPFRVAVNISAVQFAQKD 665 Query: 201 IERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSLRRIRNNNVYLSLNDFGMGYAE 260 + + G E L L+ + + R ++ + V+LS++DFG GY+ Sbjct: 666 LPEVVSRALAASGLEAQYLELELTESV-IQSADRAIETMHELVALGVHLSIDDFGTGYSS 724 Query: 261 LSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSKQLHIDVIADGIETKKQAGYM 320 LS+L+ P + + + +IES+ + TII ++ +L ++VIA+G+ET+ Q ++ Sbjct: 725 LSYLKLFPIDTLKIDQHFTKNIESDEKDAALVKTIIRMAHELDLNVIAEGVETENQVAFL 784 Query: 321 IERGVKYLKGIALSSPLPADAFV 343 +G + PLPA+ Sbjct: 785 KAESCNQAQGYFYNRPLPAEEIE 807 >UniRef50_B6IWY2 Diguanylate cyclase, putative n=1 Tax=Rhodospirillum centenum SW RepID=B6IWY2_RHOCS Length = 979 Score = 329 bits (845), Expect = 8e-89, Method: Composition-based stats. Identities = 54/341 (15%), Positives = 129/341 (37%), Gaps = 17/341 (4%) Query: 18 NIEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIK-TVSCQKMKLYKKLNVKSDLTLW 76 ++ P + + + +L+ L + + ++ SI T+ L +D + Sbjct: 636 DLTEPQMAARVAETVLAGLSQPFGLDGQQLFITCSIGITLFPGDATDIGALLRDADTAMH 695 Query: 77 RD------VFLRFKAYLQPKNIICDNFNSSVLPVVSSKGESMAHYNIYYQPIYNAKNGNI 130 + F + + L + + ++YQP + + Sbjct: 696 TAKSAGGNGYRFFTPEMNEAAV-----ARLSLEHALREAIDQGQFELHYQPKASLETMQT 750 Query: 131 AGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINK----LFSPIKNNLPHGFF 186 G + + ++ + S I + + + + + + Sbjct: 751 VGVEALLRWRHPEMGMI-PPSTFIPVAEETGMILAIGDWVLRAALEQINRWERAGLEPLP 809 Query: 187 ITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSLRRIRNNN 246 + +N++ I + + +G L L+ + + + L +R Sbjct: 810 VAVNVSVRQITSSHFADRIQSLLDEYGVRPDLLELEITETAMMSNMAFIADGLAELRGRG 869 Query: 247 VYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSKQLHIDV 306 + ++++DFG GY+ LS+L+ +P + + + ++ + SN+ T IA TII + +QL + V Sbjct: 870 IRIAVDDFGTGYSSLSYLRRLPITTLKVDRSFVSEAPSNADTGAIAATIIAMGRQLGLTV 929 Query: 307 IADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLL 347 +A+GIET++Q ++ +G + P+PA + L Sbjct: 930 VAEGIETQEQLDFLRRHRCHEAQGFLIGFPVPAAELEARCL 970 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_A6SVJ0 Uncharacterized conserved protein n=4 Tax=Proteo... 559 e-158 UniRef50_A4J477 Diguanylate cyclase/phosphodiesterase with PAS/P... 559 e-158 UniRef50_B9LZ98 Diguanylate cyclase/phosphodiesterase with PAS/P... 553 e-156 UniRef50_Q20JY5 Sensory box/GGDEF family protein n=1 Tax=uncultu... 550 e-155 UniRef50_C6MMM5 Response regulator receiver modulated diguanylat... 545 e-154 UniRef50_Q39R25 Diguanylate cyclase/phosphodiesterase with PAS/P... 545 e-154 UniRef50_C5S5K8 Response regulator receiver modulated diguanylat... 542 e-153 UniRef50_Q39X25 Diguanylate cyclase/phosphodiesterase n=2 Tax=Ge... 540 e-152 UniRef50_B3EBJ5 Diguanylate cyclase/phosphodiesterase with PAS/P... 538 e-152 UniRef50_B3PCE8 Sensory box/GGDEF family protein n=2 Tax=Gammapr... 536 e-151 UniRef50_A1ATC4 Periplasmic sensor diguanylate cyclase/phosphodi... 535 e-151 UniRef50_B3PHI4 Sensory box/GGDEF family protein n=1 Tax=Cellvib... 533 e-150 UniRef50_Q47ED8 Response regulator receiver modulated diguanylat... 531 e-149 UniRef50_C6X6V4 Diguanylate cyclase/phosphodiesterase with PAS/P... 529 e-149 UniRef50_A1K5K2 Conserved hypothetical signaling protein n=2 Tax... 528 e-148 UniRef50_C6ML43 Response regulator receiver modulated diguanylat... 526 e-148 UniRef50_C1DA12 Sensory box/GGDEF family protein n=1 Tax=Laribac... 525 e-148 UniRef50_Q21WW2 Diguanylate cyclase/phosphodiesterase with PAS/P... 525 e-148 UniRef50_A6T1A8 Sensory box/GGDEF family protein n=1 Tax=Janthin... 525 e-147 UniRef50_A1KA22 GGDEF/EAL/PAS/PAC/GAF-domain containing protein ... 524 e-147 UniRef50_Q1K3I2 Diguanylate cyclase/phosphodiesterase with PAS/P... 524 e-147 UniRef50_Q1K234 Diguanylate cyclase/phosphodiesterase with PAS/P... 524 e-147 UniRef50_Q1H367 Diguanylate cyclase/phosphodiesterase (GGDEF & E... 523 e-147 UniRef50_C5V3L4 Diguanylate cyclase/phosphodiesterase with PAS/P... 523 e-147 UniRef50_Q3JBM4 Sensor protein n=4 Tax=Bacteria RepID=Q3JBM4_NITOC 523 e-147 UniRef50_A4G4R7 Putative uncharacterized protein n=1 Tax=Hermini... 522 e-147 UniRef50_C0ZBT5 Probable signaling protein n=1 Tax=Brevibacillus... 522 e-147 UniRef50_Q47H73 Diguanylate cyclase/phosphodiesterase with PAS/P... 521 e-146 UniRef50_A0YLL7 Putative uncharacterized protein n=1 Tax=Lyngbya... 521 e-146 UniRef50_A3DCG7 Diguanylate cyclase/phosphodiesterase with PAS/P... 521 e-146 UniRef50_B9Z1R5 Diguanylate cyclase/phosphodiesterase with PAS/P... 520 e-146 UniRef50_C6P464 Diguanylate cyclase/phosphodiesterase with PAS/P... 520 e-146 UniRef50_Q1JZB1 Diguanylate cyclase/phosphodiesterase with PAS/P... 520 e-146 UniRef50_C6XAD3 Diguanylate cyclase/phosphodiesterase with PAS/P... 519 e-146 UniRef50_C5UZT1 Diguanylate cyclase/phosphodiesterase with PAS/P... 519 e-146 UniRef50_Q2W807 Predicted signal transduction protein n=4 Tax=Ma... 519 e-146 UniRef50_C7RJ77 Diguanylate cyclase/phosphodiesterase with PAS/P... 518 e-146 UniRef50_B8HWB1 Diguanylate cyclase/phosphodiesterase with FHA a... 518 e-145 UniRef50_Q1JXC9 Diguanylate cyclase/phosphodiesterase with PAS/P... 518 e-145 UniRef50_C6NZD9 Diguanylate cyclase/phosphodiesterase with PAS/P... 517 e-145 UniRef50_Q1JVV8 Diguanylate cyclase/phosphodiesterase with PAS/P... 517 e-145 UniRef50_C6NZ79 Diguanylate cyclase/phosphodiesterase with PAS/P... 517 e-145 UniRef50_C6ME82 Response regulator receiver modulated diguanylat... 517 e-145 UniRef50_A8FYM5 Signal transduction protein containing a membran... 517 e-145 UniRef50_C0INC4 GGDEF family protein n=1 Tax=uncultured bacteriu... 517 e-145 UniRef50_C6E011 Response regulator receiver modulated diguanylat... 517 e-145 UniRef50_A1K5S9 GGDEF/EAL-domain containing protein n=1 Tax=Azoa... 515 e-145 UniRef50_Q5P4Q9 Putative uncharacterized protein n=1 Tax=Aromato... 515 e-145 UniRef50_A0LH12 Response regulator receiver modulated diguanylat... 515 e-145 UniRef50_A6T0F0 Sensory box/GGDEF family protein n=2 Tax=Oxaloba... 515 e-145 UniRef50_C5CTK8 Diguanylate cyclase/phosphodiesterase with PAS/P... 515 e-144 UniRef50_B8GMU1 Diguanylate cyclase/phosphodiesterase with PAS/P... 515 e-144 UniRef50_A1SZV0 Response regulator receiver modulated diguanylat... 515 e-144 UniRef50_B8GNC0 Signal transduction protein containing a membran... 515 e-144 UniRef50_Q2BMA7 PAS:GGDEF protein n=1 Tax=Neptuniibacter caesari... 515 e-144 UniRef50_A7BQZ3 Sensory box/GGDEF family protein n=1 Tax=Beggiat... 514 e-144 UniRef50_A1TLA6 Diguanylate cyclase/phosphodiesterase n=2 Tax=Ac... 514 e-144 UniRef50_C6WVK9 Diguanylate cyclase/phosphodiesterase with PAS/P... 514 e-144 UniRef50_C4L9X9 Diguanylate cyclase/phosphodiesterase with PAS/P... 514 e-144 UniRef50_A0LKD9 Response regulator receiver modulated diguanylat... 513 e-144 UniRef50_Q1H2G8 Diguanylate cyclase/phosphodiesterase n=1 Tax=Me... 513 e-144 UniRef50_Q0AIX2 Diguanylate cyclase/phosphodiesterase with PAS/P... 513 e-144 UniRef50_Q5P4K8 Putative sensory box/GGDEF family protein n=1 Ta... 513 e-144 UniRef50_C4K931 Diguanylate cyclase/phosphodiesterase with PAS/P... 513 e-144 UniRef50_C0ZBG1 Probable signaling protein YkoW n=1 Tax=Brevibac... 512 e-144 UniRef50_B5E7Y8 Response regulator receiver modulated diguanylat... 512 e-143 UniRef50_Q5P713 Predicted phospholipase A2 n=1 Tax=Aromatoleum a... 512 e-143 UniRef50_C6MBX5 Diguanylate cyclase/phosphodiesterase n=1 Tax=Ni... 511 e-143 UniRef50_A1K3A1 GGEF/EAL/PAS/PAC-domain containing protein n=1 T... 511 e-143 UniRef50_Q7NZ89 Putative uncharacterized protein n=1 Tax=Chromob... 511 e-143 UniRef50_Q1JZ20 Diguanylate cyclase/phosphodiesterase n=1 Tax=De... 510 e-143 UniRef50_Q5P4W8 Putative uncharacterized protein n=2 Tax=Proteob... 510 e-143 UniRef50_Q0BFB8 Response regulator receiver modulated diguanylat... 510 e-143 UniRef50_C4KA21 Diguanylate cyclase/phosphodiesterase with Chase... 510 e-143 UniRef50_C5V1I4 Diguanylate cyclase/phosphodiesterase with PAS/P... 510 e-143 UniRef50_Q0F127 Putative uncharacterized protein n=1 Tax=Maripro... 510 e-143 UniRef50_Q1K1R0 Response regulator receiver modulated diguanylat... 510 e-143 UniRef50_B9Z8G8 Diguanylate cyclase/phosphodiesterase with PAS/P... 510 e-143 UniRef50_A1ASK8 Response regulator receiver modulated diguanylat... 509 e-143 UniRef50_Q74A79 Sensory box/GGDEF family protein n=1 Tax=Geobact... 509 e-143 UniRef50_B9M6C9 Response regulator receiver modulated diguanylat... 509 e-143 UniRef50_B8H3B9 Sensory box/GGDEF family protein n=5 Tax=Cauloba... 509 e-143 UniRef50_Q3A4W5 Response regulator receiver modulated diguanylat... 509 e-143 UniRef50_A5GBG4 Response regulator receiver modulated diguanylat... 508 e-143 UniRef50_Q221U3 Diguanylate cyclase/phosphodiesterase with PAS/P... 508 e-143 UniRef50_B9Z192 Diguanylate cyclase/phosphodiesterase with PAS/P... 508 e-143 UniRef50_Q1NRJ4 PAS:GGDEF:EAL:GAF n=5 Tax=Deltaproteobacteria Re... 508 e-143 UniRef50_C1DBY5 Diguanylate cyclase/phosphodiesterase with PAS/P... 508 e-143 UniRef50_C6P1A0 Diguanylate cyclase/phosphodiesterase with PAS/P... 508 e-142 UniRef50_A0L8C6 Response regulator receiver modulated diguanylat... 508 e-142 UniRef50_A1TI51 Diguanylate cyclase/phosphodiesterase with PAS/P... 508 e-142 UniRef50_Q3A2X0 Motility repressor MorA n=1 Tax=Pelobacter carbi... 508 e-142 UniRef50_C1DB08 Predicted signal transduction protein containing... 507 e-142 UniRef50_A1TX84 Response regulator receiver modulated diguanylat... 507 e-142 UniRef50_Q07P60 Diguanylate cyclase/phosphodiesterase with PAS/P... 507 e-142 UniRef50_C6P6Y2 Diguanylate cyclase/phosphodiesterase with PAS/P... 507 e-142 UniRef50_Q3SIW6 Putative diguanylate cyclase/phosphodiesterase (... 506 e-142 UniRef50_C7RNY7 Diguanylate cyclase/phosphodiesterase with PAS/P... 506 e-142 UniRef50_A1K4Z0 EAL/GGDEF/PAS/PAC-domain containing signalling p... 506 e-142 UniRef50_C4L987 Diguanylate cyclase/phosphodiesterase with PAS/P... 506 e-142 UniRef50_A1STH5 Diguanylate cyclase/phosphodiesterase with PAS/P... 506 e-142 UniRef50_C6X9G9 Diguanylate cyclase/phosphodiesterase with PAS/P... 506 e-142 UniRef50_Q0EWZ7 Putative uncharacterized protein n=1 Tax=Maripro... 505 e-142 UniRef50_B2JCW5 Diguanylate cyclase/phosphodiesterase with PAS/P... 505 e-142 UniRef50_Q74FR9 Sensory box/GGDEF family protein n=1 Tax=Geobact... 505 e-142 UniRef50_A1W8G6 Diguanylate cyclase/phosphodiesterase n=7 Tax=Co... 505 e-142 UniRef50_Q47GC0 Diguanylate cyclase/phosphodiesterase with PAS/P... 505 e-141 UniRef50_C5T1I4 Diguanylate cyclase/phosphodiesterase with PAS/P... 505 e-141 UniRef50_C0Z6C0 Probable signaling protein n=1 Tax=Brevibacillus... 505 e-141 UniRef50_Q3A1F4 Response regulator receiver modulated diguanylat... 504 e-141 UniRef50_C6D7W4 Diguanylate cyclase/phosphodiesterase with PAS/P... 504 e-141 UniRef50_B0UQT2 Diguanylate cyclase/phosphodiesterase with PAS/P... 504 e-141 UniRef50_Q3A628 Diguanylate cyclase/phosphodiesterase with PAS/P... 504 e-141 UniRef50_B2T9B2 Diguanylate cyclase/phosphodiesterase with PAS/P... 504 e-141 UniRef50_C1DJP1 Cyclic di-GMP signal transduction protein n=1 Ta... 504 e-141 UniRef50_Q47IA0 Diguanylate cyclase/phosphodiesterase with PAS/P... 504 e-141 UniRef50_A4G3M6 Putative two-component response regulator n=1 Ta... 504 e-141 UniRef50_Q2RPL3 Diguanylate cyclase/phosphodiesterase n=1 Tax=Rh... 504 e-141 UniRef50_A6VW49 Diguanylate cyclase/phosphodiesterase n=2 Tax=Ma... 503 e-141 UniRef50_A6U700 Diguanylate cyclase/phosphodiesterase with PAS/P... 503 e-141 UniRef50_B7V0E6 Motility regulator n=25 Tax=Pseudomonas RepID=B7... 503 e-141 UniRef50_A1KCA9 GGDEF/EAL/PAS/PAC-domain containing protein n=1 ... 503 e-141 UniRef50_Q3A6S1 Diguanylate cyclase/phosphodiesterase with PAS/P... 503 e-141 UniRef50_D2LQL8 Diguanylate cyclase/phosphodiesterase with PAS/P... 503 e-141 UniRef50_Q0F2A0 Diguanylate cyclase/phosphodiesterase (GGDEF & E... 503 e-141 UniRef50_B8GSM4 Diguanylate cyclase/phosphodiesterase n=1 Tax=Th... 502 e-141 UniRef50_Q5P5U6 Putative uncharacterized protein n=1 Tax=Aromato... 502 e-141 UniRef50_Q2Y6N3 Response regulator receiver modulated diguanylat... 502 e-141 UniRef50_C0ZBT6 Probable signaling protein YkoW n=1 Tax=Brevibac... 502 e-140 UniRef50_Q1NJA1 PAS:GGDEF:EAL n=7 Tax=delta proteobacterium MLMS... 502 e-140 UniRef50_A0L2H7 Diguanylate cyclase/phosphodiesterase with PAS/P... 502 e-140 UniRef50_Q1JX80 Diguanylate cyclase/phosphodiesterase with PAS/P... 501 e-140 UniRef50_Q39WZ5 Diguanylate cyclase/phosphodiesterase with PAS/P... 501 e-140 UniRef50_A1ALB3 Response regulator receiver modulated diguanylat... 501 e-140 UniRef50_A0L9T5 Diguanylate cyclase/phosphodiesterase with PAS/P... 501 e-140 UniRef50_Q47HF3 Response regulator receiver modulated diguanylat... 500 e-140 UniRef50_C6P6N2 Diguanylate cyclase/phosphodiesterase with PAS/P... 500 e-140 UniRef50_Q3SJL3 Putative diguanylate cyclase/phosphodiesterase (... 500 e-140 UniRef50_C6X7I8 Response regulator receiver modulated diguanylat... 500 e-140 UniRef50_Q2W3S8 Predicted signal transduction protein containing... 500 e-140 UniRef50_Q3A1G1 Diguanylate cyclase/phosphodiesterase with PAS/P... 500 e-140 UniRef50_A1WEV3 Diguanylate cyclase/phosphodiesterase with PAS/P... 500 e-140 UniRef50_Q1GXZ6 Diguanylate cyclase/phosphodiesterase (GGDEF & E... 500 e-140 UniRef50_C7RMB6 Diguanylate cyclase/phosphodiesterase with PAS/P... 499 e-140 UniRef50_B8DLV2 Diguanylate cyclase/phosphodiesterase with PAS/P... 499 e-140 UniRef50_Q12GF0 Diguanylate cyclase/phosphodiesterase (GGDEF & E... 498 e-140 UniRef50_A4TX60 PAS:GGDEF n=1 Tax=Magnetospirillum gryphiswalden... 498 e-140 UniRef50_A4U3H4 PAS:GGDEF n=1 Tax=Magnetospirillum gryphiswalden... 497 e-139 UniRef50_Q21SZ9 Diguanylate cyclase/phosphodiesterase with PAS/P... 497 e-139 UniRef50_B4W545 PAS fold family n=1 Tax=Microcoleus chthonoplast... 497 e-139 UniRef50_Q7NYX4 Putative uncharacterized protein n=1 Tax=Chromob... 497 e-139 UniRef50_A1K2X7 GGDEF/EAL/PAS/PAC/GAF-domain containing protein ... 497 e-139 UniRef50_B1Y2A0 Diguanylate cyclase/phosphodiesterase with PAS/P... 497 e-139 UniRef50_A1KAZ1 Hypothetical signaling protein n=1 Tax=Azoarcus ... 497 e-139 UniRef50_B6AQA1 Diguanylate cyclase/phosphodiesterase n=2 Tax=Le... 497 e-139 UniRef50_A1K569 EAL/GGDEF/PAS/PAC-domain containing signalling p... 497 e-139 UniRef50_Q89HX5 Bll5864 protein n=1 Tax=Bradyrhizobium japonicum... 497 e-139 UniRef50_Q2YCL1 Diguanylate cyclase/phosphodiesterase with PAS/P... 496 e-139 UniRef50_C6XAG8 Diguanylate cyclase/phosphodiesterase with PAS/P... 496 e-139 UniRef50_B7HSZ4 Response regulator receiver modulated diguanylat... 496 e-139 UniRef50_A4U4R0 Sensory box/GGDEF family protein n=3 Tax=Magneto... 496 e-139 UniRef50_Q4ZMU9 PAS:GGDEF n=4 Tax=Pseudomonas syringae group Rep... 496 e-139 UniRef50_C8SP12 Diguanylate cyclase/phosphodiesterase with PAS/P... 496 e-139 UniRef50_C3X2S2 Diguanylate cyclase/phosphodiesterase with PAS/P... 496 e-139 UniRef50_B0CAC5 Diguanylate cyclase/phosphodiesterase n=7 Tax=ce... 496 e-139 UniRef50_Q31GH8 Diguanylate cyclase/phosphodiesterase with PAS/P... 496 e-139 UniRef50_C7CCD7 Putative diguanylate cyclase (GGDEF) /phosphodie... 495 e-139 UniRef50_A1WHK3 Diguanylate cyclase/phosphodiesterase with PAS/P... 495 e-139 UniRef50_C5JAR6 Conserved uncharacterized protein n=1 Tax=uncult... 495 e-139 UniRef50_B7KTV8 Diguanylate cyclase/phosphodiesterase with PAS/P... 495 e-139 UniRef50_C6NZZ7 Diguanylate cyclase/phosphodiesterase with PAS/P... 495 e-139 UniRef50_C7QU83 Sensor protein n=3 Tax=cellular organisms RepID=... 494 e-138 UniRef50_Q1NQ51 PAS:GGDEF:EAL n=1 Tax=delta proteobacterium MLMS... 494 e-138 UniRef50_C9P6X4 Diguanylate cyclase/phosphodiesterase with PAS/P... 494 e-138 UniRef50_C4L753 Diguanylate cyclase/phosphodiesterase with PAS/P... 494 e-138 UniRef50_A1W7N9 Diguanylate cyclase/phosphodiesterase with PAS/P... 494 e-138 UniRef50_Q47FQ3 Diguanylate cyclase/phosphodiesterase with PAS/P... 494 e-138 UniRef50_C7RK65 Diguanylate cyclase/phosphodiesterase with PAS/P... 494 e-138 UniRef50_C5V1H2 Diguanylate cyclase/phosphodiesterase with PAS/P... 494 e-138 UniRef50_Q8DL70 Tll0627 protein n=2 Tax=Chroococcales RepID=Q8DL... 494 e-138 UniRef50_Q2SF23 Predicted signal transduction protein containing... 494 e-138 UniRef50_C6P3H6 Diguanylate cyclase/phosphodiesterase with PAS/P... 493 e-138 UniRef50_B8DLW6 Response regulator receiver modulated diguanylat... 493 e-138 UniRef50_B9JLU1 Sensory box/GGDEF family protein n=1 Tax=Agrobac... 493 e-138 UniRef50_B7KHV9 Diguanylate cyclase/phosphodiesterase with GAF s... 492 e-138 UniRef50_B7KBH1 Diguanylate cyclase/phosphodiesterase n=9 Tax=Ch... 492 e-138 UniRef50_Q2BPG4 Sensory box/GGDEF family protein n=1 Tax=Neptuni... 492 e-138 UniRef50_A1TZQ7 Diguanylate cyclase/phosphodiesterase with PAS/P... 492 e-138 UniRef50_Q89VU0 Bll0955 protein n=2 Tax=cellular organisms RepID... 492 e-138 UniRef50_Q2Y9Y0 Response regulator receiver (CheY-like) modulate... 492 e-138 UniRef50_C6MIL1 Diguanylate cyclase/phosphodiesterase with PAS/P... 491 e-137 UniRef50_A1ALY4 Diguanylate cyclase/phosphodiesterase n=1 Tax=Pe... 491 e-137 UniRef50_C5V4D4 Diguanylate cyclase/phosphodiesterase with PAS/P... 491 e-137 UniRef50_Q21FF8 Diguanylate cyclase/phosphodiesterase n=1 Tax=Sa... 491 e-137 UniRef50_D1U882 Diguanylate cyclase/phosphodiesterase with PAS/P... 491 e-137 UniRef50_C6P1Q1 Diguanylate cyclase/phosphodiesterase with PAS/P... 491 e-137 UniRef50_Q3SK01 Putative diguanylate cyclase/phosphodiesterase (... 491 e-137 UniRef50_B1M2C0 Diguanylate cyclase/phosphodiesterase with PAS/P... 491 e-137 UniRef50_A0LAF7 Diguanylate cyclase/phosphodiesterase with PAS/P... 491 e-137 UniRef50_Q2SG37 Predicted signal transduction protein containing... 491 e-137 UniRef50_D1T5E1 Diguanylate cyclase/phosphodiesterase with PAS/P... 491 e-137 UniRef50_B1ZGT4 Diguanylate cyclase/phosphodiesterase n=6 Tax=Me... 490 e-137 UniRef50_Q3A0D5 Diguanylate cyclase/phosphodiesterase with PAS/P... 490 e-137 UniRef50_B3PKJ2 EAL domain protein n=1 Tax=Cellvibrio japonicus ... 490 e-137 UniRef50_Q31GA6 Diguanylate cyclase/phosphodiesterase n=1 Tax=Th... 490 e-137 UniRef50_C5V5K2 Diguanylate cyclase/phosphodiesterase with PAS/P... 490 e-137 UniRef50_Q47EK9 PAS:GGDEF n=1 Tax=Dechloromonas aromatica RCB Re... 489 e-137 UniRef50_B9M1S6 Diguanylate cyclase/phosphodiesterase with PAS/P... 489 e-137 UniRef50_Q2W154 Putative uncharacterized protein n=2 Tax=Magneto... 489 e-137 UniRef50_B7S1Z2 Cyclic diguanylate phosphodiesterase domain prot... 489 e-137 UniRef50_C9Y8E7 Putative uncharacterized protein n=1 Tax=Curviba... 489 e-137 UniRef50_Q1N453 Predicted signal transduction protein containing... 489 e-137 UniRef50_C9Y9D8 Putative uncharacterized protein n=1 Tax=Curviba... 489 e-137 UniRef50_B3E661 Diguanylate cyclase/phosphodiesterase with PAS/P... 489 e-137 UniRef50_Q3JAR2 Diguanylate cyclase/phosphodiesterase with PAS/P... 488 e-137 UniRef50_B1M266 Diguanylate cyclase/phosphodiesterase with PAS/P... 488 e-136 UniRef50_Q608F9 Sensory box protein n=1 Tax=Methylococcus capsul... 488 e-136 UniRef50_C6J6G7 Diguanylate cyclase/phosphodiesterase n=1 Tax=Pa... 488 e-136 UniRef50_B6BGL3 Diguanylate cyclase/phosphodiesterase n=1 Tax=Ca... 488 e-136 UniRef50_B4B904 Diguanylate cyclase/phosphodiesterase with GAF s... 488 e-136 UniRef50_D1C8G6 Diguanylate cyclase/phosphodiesterase with PAS/P... 487 e-136 UniRef50_D2LYI1 Diguanylate cyclase/phosphodiesterase with extra... 487 e-136 UniRef50_Q3MFD3 Diguanylate cyclase/phosphodiesterase n=4 Tax=No... 487 e-136 UniRef50_C7RS22 Diguanylate cyclase/phosphodiesterase with PAS/P... 487 e-136 UniRef50_Q2W4Z4 Predicted signal transduction protein containing... 487 e-136 UniRef50_C6WTL1 Diguanylate cyclase/phosphodiesterase with PAS/P... 487 e-136 UniRef50_A1SY75 Diguanylate cyclase/phosphodiesterase n=1 Tax=Ps... 486 e-136 UniRef50_Q31G31 Diguanylate cyclase/phosphodiesterase n=1 Tax=Th... 486 e-136 UniRef50_A1SZA9 Diguanylate cyclase/phosphodiesterase with PAS/P... 486 e-136 UniRef50_Q1H3Y9 Diguanylate cyclase/phosphodiesterase with PAS/P... 486 e-136 UniRef50_B8HRI7 Response regulator receiver modulated diguanylat... 486 e-136 UniRef50_C6P6X8 Diguanylate cyclase/phosphodiesterase with PAS/P... 486 e-136 UniRef50_A8VRH4 Putative uncharacterized protein n=1 Tax=Bacillu... 486 e-136 UniRef50_Q479L8 Diguanylate cyclase/phosphodiesterase with PAS/P... 486 e-136 UniRef50_A6QAC3 Putative uncharacterized protein n=1 Tax=Sulfuro... 485 e-136 UniRef50_Q89WT2 Bll0596 protein n=1 Tax=Bradyrhizobium japonicum... 485 e-136 Sequences not found previously or not previously below threshold: UniRef50_Q74BV5 Sensory box/response regulator n=1 Tax=Geobacter... 513 e-144 UniRef50_C7RNA9 Diguanylate cyclase/phosphodiesterase with PAS/P... 511 e-143 UniRef50_Q47A14 Diguanylate cyclase/phosphodiesterase with PAS/P... 510 e-143 UniRef50_A1RPJ9 Diguanylate cyclase/phosphodiesterase with PAS/P... 498 e-139 UniRef50_B9YY70 Diguanylate cyclase/phosphodiesterase with PAS/P... 492 e-138 UniRef50_A2SDI4 Signal transduction protein n=2 Tax=Proteobacter... 491 e-137 UniRef50_C1DCZ4 Predicted signal transduction protein containing... 490 e-137 UniRef50_Q47AR1 Diguanylate cyclase/phosphodiesterase with PAS/P... 489 e-137 UniRef50_A0L8P4 Response regulator receiver modulated diguanylat... 489 e-137 UniRef50_B7KEB0 Diguanylate cyclase/phosphodiesterase n=6 Tax=Ba... 488 e-136 UniRef50_D2XIQ4 Putative signal transduction protein n=1 Tax=unc... 488 e-136 UniRef50_B2UJ08 Diguanylate cyclase/phosphodiesterase n=5 Tax=Ra... 488 e-136 UniRef50_C5V4D8 Diguanylate cyclase/phosphodiesterase with PAS/P... 486 e-136 UniRef50_Q7P0M4 Putative uncharacterized protein n=1 Tax=Chromob... 486 e-136 >UniRef50_A6SVJ0 Uncharacterized conserved protein n=4 Tax=Proteobacteria RepID=A6SVJ0_JANMA Length = 956 Score = 559 bits (1443), Expect = e-158, Method: Composition-based stats. Identities = 59/357 (16%), Positives = 130/357 (36%), Gaps = 13/357 (3%) Query: 1 MNTIKIKLNLIDYDSIVNIEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIKT-VSCQ 59 M + L L + L + I ++ + + ++ + SI V Sbjct: 597 MGGDEFVLILPERV------DAGLSTGIVQRIMDGIAQPLTIEGHEFFISSSIGVAVYPN 650 Query: 60 KMKLYKKLNVKSDLTLWRDVFLRFK-AYLQPKNIICDNFNSSVLPVVSSKGESMAHYNIY 118 ++L +D+ ++R ++ L + ++ Sbjct: 651 DGVTPEELIKHADIAMYRAKETGRNNFQFYTSSMNERALERLRLEGDLRNAMERGEFILH 710 Query: 119 YQPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINKLFSPIK 178 YQP + + G I G + I ++ + I + + + + Sbjct: 711 YQPQLDLRTGKIVGVEALIRWQHPELGMI-PPMRFIGLAEETGLIVPIGAWVIREACRQN 769 Query: 179 NNLPHG----FFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRR 234 +++N++ D+ ++ L ++ + + + Sbjct: 770 KVWQEHGLGSLRMSVNLSARQFAQQDLLESIALALEETQLPPQCLEIELTESLVMADVDH 829 Query: 235 YQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATT 294 LR ++ V LS++DFG GY+ LS+L+ P + + ++ +DI ++ I + Sbjct: 830 AIGILRELKALGVQLSIDDFGTGYSSLSYLKRFPIDVLKIDRSFVNDITTDPDDAAIVAS 889 Query: 295 IIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLLASLK 351 II L+ L + VIA+G+ET++Q Y+ + ++G S P+ ADA L + Sbjct: 890 IISLAHSLRLTVIAEGVETEEQLAYLQQHDCDQIQGYFFSRPITADAMEVMLKDDKR 946 >UniRef50_A4J477 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=2 Tax=Firmicutes RepID=A4J477_DESRM Length = 947 Score = 559 bits (1442), Expect = e-158, Method: Composition-based stats. Identities = 58/354 (16%), Positives = 141/354 (39%), Gaps = 8/354 (2%) Query: 7 KLNLIDYDSIVN-IEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIKT-VSCQKMKLY 64 ++ ++ +++ I S + +++ L + + SI + Sbjct: 593 RIGGDEFTILLHNITRAENASIVADKIIDTLANPWIIGNHEFHITTSIGIALYPDDGTDA 652 Query: 65 KKLNVKSDLTLWRDVFLRFKAYLQPKN-IICDNFNSSVLPVVSSKGESMAHYNIYYQPIY 123 + L +D +++ + Y + L + + IYYQP Sbjct: 653 ESLLKNADAAMYQAKEMGRNNYQFYTPTMNAQTLRRFELENNLRRALDRKEFVIYYQPQV 712 Query: 124 NAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINKLFSP----IKN 179 G I G + I ++ + ++ I + + I + ++ Sbjct: 713 EIHTGKIVGVEALIRWQHPQRGMISP-AEFIPMAEETGLIIPIGEWILRRACAQNKAWQD 771 Query: 180 NLPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSL 239 +T+N++ L + + + ++ G L L+ + + + + +L Sbjct: 772 RGFSPMRVTVNLSARQFLQPHLPQYISNVLEDTGLGPQWLELEITESLAMKDVAFTEKTL 831 Query: 240 RRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLS 299 +R + L+++DFG GY+ L++L+ +P + + ++ HD+ + S I + II L Sbjct: 832 IELRKMGITLAIDDFGTGYSSLNYLKRLPIDILKIDRSFIHDLNTESDDVAIISAIITLG 891 Query: 300 KQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLLASLKQV 353 L + V+A+G+ETK+Q ++ ++ ++G + PLP +K L++ ++ Sbjct: 892 HNLKMKVVAEGVETKEQLMFLRQQQCDLMQGYLFTKPLPVRELEQKYLSNNTKL 945 >UniRef50_B9LZ98 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Geobacter sp. FRC-32 RepID=B9LZ98_GEOSF Length = 912 Score = 553 bits (1427), Expect = e-156, Method: Composition-based stats. Identities = 67/355 (18%), Positives = 141/355 (39%), Gaps = 8/355 (2%) Query: 3 TIKIKLNLIDYDSIVN-IEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIKT-VSCQK 60 ++ ++ I++ IE L++I ++L+ + K +N+ SI + + Sbjct: 555 DTVARIGGDEFVIIISAIEHAEDLNKIAEKILAAISKPLVLNDQEIFITASIGIAIYPED 614 Query: 61 MKLYKKLNVKSDLTLWRDVFLRFKAYLQP-KNIICDNFNSSVLPVVSSKGESMAHYNIYY 119 + L +DL +++ A+ + + +L + + I+Y Sbjct: 615 GTDVQGLLKNADLAMYKAKDQGKNAFQYFSREMNVQALEHLILENSLRRALERNEFVIFY 674 Query: 120 QPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINKLFSP--- 176 QP + K+G + G + I ++ D S I + + + Sbjct: 675 QPQMDLKSGRLVGMEALIRWQHPDLGLL-PPSRFIPMAEETGLILPIGEWALQTACAKNR 733 Query: 177 -IKNNLPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRY 235 + + +N+ +K G +L L+ + + Sbjct: 734 AWMDAGFMPLRVAVNLCGIQFRQKKFIELIEAVLKKTGLAPSQLELELTESMLMSKAEES 793 Query: 236 QSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTI 295 + L +++ V L+++DFG GY+ LS+L+N P + V + ++ D+ +N I + I Sbjct: 794 TTVLHKLKEMGVSLAIDDFGTGYSSLSYLKNFPINRVKIDRSFIRDVPNNPDDTAIVSAI 853 Query: 296 IDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLLASL 350 I ++ L++ V A+G+E Q ++ R ++G LSSPLP F R L + Sbjct: 854 IAMAHNLNLKVTAEGVENHSQLEFLSTRNCNEIQGYLLSSPLPEAEFTRFLRGGM 908 >UniRef50_Q20JY5 Sensory box/GGDEF family protein n=1 Tax=uncultured bacterium RepID=Q20JY5_9BACT Length = 874 Score = 550 bits (1419), Expect = e-155, Method: Composition-based stats. Identities = 55/352 (15%), Positives = 135/352 (38%), Gaps = 12/352 (3%) Query: 6 IKLNLIDYDSIVN-IEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIKT-VSCQKMKL 63 +L ++ I+N + ++++ ++ + + + + SI + Sbjct: 524 FRLGGDEFTIILNDLTDDTDMAKVAQKIRKAIARPCRIKDHELYITVSIGISIYPDDGDD 583 Query: 64 YKKLNVKSDLTLWRDVF--LRFKAYLQPKNIICDNFNSSVLPVVSSKGESMAHYNIYYQP 121 + L +D+ ++ ++ +++ N +L IYYQP Sbjct: 584 VETLVKNADIAMYAAKEENQGYRFFIEEMN--RKTLERMMLENNLRNALQHDQLIIYYQP 641 Query: 122 IYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINKLFSPIKNNL 181 + + I G + + + + + S I + + + + Sbjct: 642 LVD-STNQIVGMEALLRWHHPELGLISP-SQFIPLAEETGLIVPIGKWVLRCACQQARKW 699 Query: 182 PH----GFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQS 237 F++ +N++ D+ ++ L L+ + + + + Sbjct: 700 HEMGYTRFYVAVNLSVRQFREPDLVETIEQILEATDLPPDCLKLEVTESGIMEHPEQAIA 759 Query: 238 SLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIID 297 ++ +R ++ S++DFG GY+ LS+L+ P + + ++ D +N I TII Sbjct: 760 KMKMLRAKGIHFSIDDFGTGYSSLSYLKRFPIDTLKIDRSFVIDSTTNKDDQEIIKTIIA 819 Query: 298 LSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLLAS 349 +++ L +D +A+G+E K+Q ++I G ++G P+PA+ F L Sbjct: 820 MARNLGMDTVAEGVEAKEQQDFLIHHGCHMMQGYYFGRPMPAEKFEDMLQTR 871 >UniRef50_C6MMM5 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Geobacter sp. M18 RepID=C6MMM5_9DELT Length = 1097 Score = 545 bits (1407), Expect = e-154, Method: Composition-based stats. Identities = 56/352 (15%), Positives = 135/352 (38%), Gaps = 13/352 (3%) Query: 2 NTIKIKLNLIDYDSIVNIEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIKT-VSCQK 60 + + L D +++ ++ + + Y + E + S + + Sbjct: 609 GGDEFVIVLSDLAV------SEDAAKVARKIQDAVCRPYQIGEHELVVSCSTGISLYPKD 662 Query: 61 MKLYKKLNVKSDLTLWRDVFLRFKAYLQPK-NIICDNFNSSVLPVVSSKGESMAHYNIYY 119 + L +D+ ++R + ++ + + + ++Y Sbjct: 663 GSDAQVLLKNADVAMYRAKQCGRNNFQFYTGDLNDIVLARLTMEKYLRRALERDEFLVHY 722 Query: 120 QPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINKLFSP--- 176 QP + +G I G + + ++ + + + I + + + + Sbjct: 723 QPKVDLLSGRITGMEALVRWQSPELGFISP-ASFIPLAEETGLIVAIGEWVLRTACAQNK 781 Query: 177 -IKNNLPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRY 235 +++ + +N++P D+ + G + L+ + + Sbjct: 782 AWQDDGLPPMVVAVNLSPRQFRQEDLADTVHRIAEETGLAPRYIELEVVESLLMDDVDGA 841 Query: 236 QSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTI 295 + L ++ V L+++DFG GY+ LS+L+ PF + + ++ DI + + I T+ Sbjct: 842 VAMLDALKELGVQLTMDDFGTGYSSLSYLKRFPFDMMKIDQSFVRDITRDPGSAAIVRTV 901 Query: 296 IDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLL 347 I L+ L++ V+A+GIET+ Q GY+ ++G S P+PA F + L Sbjct: 902 ISLAHTLNLRVVAEGIETEGQLGYLRGLACDEMQGFYFSRPVPAAEFEQMLR 953 >UniRef50_Q39R25 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Bacteria RepID=Q39R25_GEOMG Length = 905 Score = 545 bits (1406), Expect = e-154, Method: Composition-based stats. Identities = 49/352 (13%), Positives = 127/352 (36%), Gaps = 8/352 (2%) Query: 2 NTIKIKLNLIDYDSIV-NIEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIKT-VSCQ 59 +L +Y ++ N+ + + ++++ + SI + Sbjct: 533 GDTVARLGGDEYIIVLPNVREVPDVITVAKKMINVFAAPLLLMGNEIYVTASIGIALFPT 592 Query: 60 KMKLYKKLNVKSDLTLWRDVFLRFKAYLQPKN-IICDNFNSSVLPVVSSKGESMAHYNIY 118 + L +D ++ Y + F L + + ++ Sbjct: 593 DGETVDALLKNADAAMYHAKEQGKNNYQFYSAEMNIRVFERLSLETSLHRAVKNQEFLLH 652 Query: 119 YQPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINKLFSP-- 176 YQP + +NG I G + + + + + + I + + + + Sbjct: 653 YQPRVDLRNGRICGVEALVRWNHPEMGLVSP-AKFIPLAEETGLIVPMGEWVLRTACAQN 711 Query: 177 --IKNNLPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRR 234 ++ + +N++ ++ + G L L+ + + + Sbjct: 712 KAWQDAGLPPLRMAVNLSARQFRQENLIAMVEEILMETGLAPQWLELELTESLVMQEAEK 771 Query: 235 YQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATT 294 + LR + + + ++++DFG GY+ LS+L+ P + + + + D+ + + T Sbjct: 772 SAAILRELTDRGIEVAIDDFGTGYSSLSYLKRFPIANLKIDQAFIRDMTRDPDDATLVKT 831 Query: 295 IIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKL 346 II ++ L + IA+G+E +Q ++ + ++G S P+ A+ R L Sbjct: 832 IITMAHGLGMKTIAEGVELAEQIDFLCRHQCEEMQGYYFSRPITAEELGRLL 883 >UniRef50_C5S5K8 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Allochromatium vinosum DSM 180 RepID=C5S5K8_CHRVI Length = 1069 Score = 542 bits (1399), Expect = e-153, Method: Composition-based stats. Identities = 68/355 (19%), Positives = 144/355 (40%), Gaps = 14/355 (3%) Query: 1 MNTIKIKLNLIDYDSIVNIEFPCLLSEIEIELLSQLLKGYSV-NEISKRRNRSIKT-VSC 58 + + + L N++ P + + LLS L + + + N SI + Sbjct: 716 LGGDEFLVLLE------NLQRPEDAAAVAESLLSLLQQPFHLPNGQELYVGASIGISLYP 769 Query: 59 QKMKLYKKLNVKSDLTLWRDVFLRFKAY-LQPKNIICDNFNSSVLPVVSSKGESMAHYNI 117 L +D+ +++ Y ++ L + + + + Sbjct: 770 DDGHTVTDLIQHADVAMYQAKEEGRNTYRFYTPSLTQTARERLGLEARLHRALASEEFVL 829 Query: 118 YYQPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINKLFSP- 176 +YQ + ++G + GC+ + ++ A D I + L + + Sbjct: 830 HYQAQIDMRDGRLIGCEALVRWHSATEGLVAPD-RFIPLAEETGLIVPLGEWVLRQACAD 888 Query: 177 ---IKNNLPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIR 233 + + +N++ + + D+ ++ G RL L+ + + Sbjct: 889 CQSWRARGLTDLTVAVNLSGRQLRSPDLVERVTRVLRETGLPAERLKLELTESMIMDQRE 948 Query: 234 RYQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIAT 293 + LR ++ V LS++DFG GY+ L++L+ +P + + + DI +S IA Sbjct: 949 QALERLRALKALGVRLSIDDFGTGYSSLAYLKRLPIDELKIDRDFVRDIPEDSSDMEIAA 1008 Query: 294 TIIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLLA 348 TII +++ L ++VIA+G+ET +Q ++I +G +G PLPA+AF + + A Sbjct: 1009 TIIAMARNLRLNVIAEGVETPEQCDFLIRQGCTAGQGYLFGRPLPAEAFAQVMRA 1063 >UniRef50_Q39X25 Diguanylate cyclase/phosphodiesterase n=2 Tax=Geobacter RepID=Q39X25_GEOMG Length = 633 Score = 540 bits (1392), Expect = e-152, Method: Composition-based stats. Identities = 62/351 (17%), Positives = 131/351 (37%), Gaps = 13/351 (3%) Query: 2 NTIKIKLNLIDYDSIVNIEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIKT-VSCQK 60 + +NL I + +++ + ++ SI V Sbjct: 276 GGDEFIINLS------AISDVKDAFTVAQKIIDVFRTPFVIDGYELFITTSIGISVYPHD 329 Query: 61 MKLYKKLNVKSDLTLWRDVFLRFK-AYLQPKNIICDNFNSSVLPVVSSKGESMAHYNIYY 119 + L +D+ ++R L + F L + + ++Y Sbjct: 330 GRSGDALVKNADVAMYRAKEQGRNNCQLFAPEMNARAFERLSLENDMRRALERDEFVLHY 389 Query: 120 QPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINKLFSP--- 176 QP N ++G IA + + ++ S I + L + + Sbjct: 390 QPKVNVEHGQIACMEALVRWQHPSMGLV-PPSRFIPLAEETGLIVPLGEWVLRTACQQNR 448 Query: 177 -IKNNLPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRY 235 ++ + +N++P + D+ + G LV++ + + Sbjct: 449 AWQDAGYPTMQVAVNLSPRQLRQGDLSETVARVLAETGLAPGWLVIEVTESILMDDAEET 508 Query: 236 QSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTI 295 + RR+ V +S++DFG GY+ L +L+ P + + ++ +I SN + IA + Sbjct: 509 IRTFRRLDRMGVRISIDDFGTGYSSLHYLKKFPVHTLKIDRSFVREIASNPDDEAIAGAV 568 Query: 296 IDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKL 346 I ++K L++ V+A+G+ET +Q + +Y++G S P PA+ F L Sbjct: 569 ISMAKGLNLGVVAEGVETVEQMEVLRALNCRYMQGFLFSEPAPAEQFTPVL 619 >UniRef50_B3EBJ5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Proteobacteria RepID=B3EBJ5_GEOLS Length = 965 Score = 538 bits (1388), Expect = e-152, Method: Composition-based stats. Identities = 58/354 (16%), Positives = 145/354 (40%), Gaps = 8/354 (2%) Query: 2 NTIKIKLNLIDYDSIVN-IEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIKT-VSCQ 59 + +L ++ +++ ++ + + +++L QL + Y +++ + SI + + Sbjct: 599 SDTVARLGGDEFVVLISALDNDHAVGSVVMKILEQLCEPYQIDDHEVYTSSSIGISLFPR 658 Query: 60 KMKLYKKLNVKSDLTLWRDVFLRFK-AYLQPKNIICDNFNSSVLPVVSSKGESMAHYNIY 118 + ++L +D+ +++ + + +L + + + Sbjct: 659 DGRDAEELLKNADMAMYQAKEAGRNTCHFFSPELNMRATERLLLESTMRRALEREEFFLV 718 Query: 119 YQPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHI----NKLF 174 YQP ++G+IAG + + ++ D ++ I + L + + Sbjct: 719 YQPQMELRSGHIAGIEALLRWRHPDLG-VVPPNNFIPIAEETGLIVPLGEWVLAEACRQA 777 Query: 175 SPIKNNLPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRR 234 + + +N++ ++ + G + L L+ + + Sbjct: 778 VRWQQEGQPPLRMAVNVSARQFRQRNLGLRIEKILMETGLDPALLELELTESAVMENPEE 837 Query: 235 YQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATT 294 +LR+++ + LS++DFG GY+ LSHL++ P + + ++ + + IA Sbjct: 838 AILTLRQLKKMGITLSIDDFGTGYSSLSHLKHFPIDRLKIDRSFVKHVTRDHNDATIAEA 897 Query: 295 IIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLLA 348 II L+ + + V+A+GIE +Q +M +R ++G LS P+ A+ F L Sbjct: 898 IIALAHSMKLTVVAEGIEHSEQMEFMHQRHCDTMQGYYLSRPVTAEEFGTFLKR 951 >UniRef50_B3PCE8 Sensory box/GGDEF family protein n=2 Tax=Gammaproteobacteria RepID=B3PCE8_CELJU Length = 772 Score = 536 bits (1383), Expect = e-151, Method: Composition-based stats. Identities = 59/352 (16%), Positives = 139/352 (39%), Gaps = 13/352 (3%) Query: 1 MNTIKIKLNLIDYDSIVNIEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIK-TVSCQ 59 + + + L + ++ F + +LL+ L + ++ S SI ++ + Sbjct: 406 LGGDEFVVVLEGIHDVDDVIF------VANKLLATLSRPLDISGHSISATVSIGVSIFPE 459 Query: 60 KMKLYKKLNVKSDLTLWRDVFLRFK-AYLQPKNIICDNFNSSVLPVVSSKGESMAHYNIY 118 +L +D+ +++ K + N +L + +Y Sbjct: 460 DGADTDELLKNADIAMYKAKEAGKNNCQFYTKGMNATAVNYLLLENDLRRAIEQNQLALY 519 Query: 119 YQPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINKLFSPIK 178 YQP + K G++ G + + ++ + + + I + + + + K Sbjct: 520 YQPQIDLKTGDMTGVEALVRWQHPERGLVSP-AHFIPLAEETGLIVPIGEWVLREACKQK 578 Query: 179 NNLPHGFF----ITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRR 234 + +N++P + + ++ G E L L+ + + Sbjct: 579 KIWLDTGKNVGKVAVNLSPRQFRQKNFPGKVEAILQETGLEAKYLELEITESCAMEHAGE 638 Query: 235 YQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATT 294 + L ++ +L+++DFG GY+ L++LQ P + + ++ HDI ++ IA T Sbjct: 639 TINQLNQLNQMGTFLAIDDFGTGYSSLAYLQRFPIQKLKIDRSFIHDIHDDANDAAIAKT 698 Query: 295 IIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKL 346 II L+ + + V+A+G+ET+ QA ++ +G ++G + P+ A Sbjct: 699 IIGLAHNMQLRVVAEGVETESQAEWLRAKGCDQVQGFLYAKPMTAKQLESHF 750 >UniRef50_A1ATC4 Periplasmic sensor diguanylate cyclase/phosphodiesterase n=1 Tax=Pelobacter propionicus DSM 2379 RepID=A1ATC4_PELPD Length = 876 Score = 535 bits (1381), Expect = e-151, Method: Composition-based stats. Identities = 57/355 (16%), Positives = 129/355 (36%), Gaps = 13/355 (3%) Query: 1 MNTIKIKLNLIDYDSIVNIEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIK-TVSCQ 59 + + + + + I P + ++L + + + S+ T+ Sbjct: 512 LGGDEFTIIIDE------IATPADSLLVAEKILHVFSAPFRLEKHEMFITASMGVTLYPN 565 Query: 60 KMKLYKKLNVKSDLTLWRDVFLRFKAYLQPKN-IICDNFNSSVLPVVSSKGESMAHYNIY 118 +KL +D ++ Y + + + + ++ Sbjct: 566 DGDTAEKLLKNADTAMYHAKEEGRNTYQFFSEEMNSRVSERLSMETGLRHALARNEFLLH 625 Query: 119 YQPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINK----LF 174 YQP N G I G + I + D+ I + + + + Sbjct: 626 YQPRVNTTTGRIVGVEALIRWQQPQKGLILPDA-FIPLAEETGLIIPIGEWVLRNTCTQA 684 Query: 175 SPIKNNLPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRR 234 + I++NI+ ++ ++ G + L L+ + + R Sbjct: 685 RAWQEAGFAQMRISVNISCRQFTHDNLPDTIRGILRETGLQPSCLELEITESVIMLNPER 744 Query: 235 YQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATT 294 S L ++ + ++++DFG GY+ LS L+ +P + + K+ I N + + T Sbjct: 745 AISLLNELKEMGISIAIDDFGTGYSSLSLLKRLPADILKIDKSFVSGIPGNKSDETLVAT 804 Query: 295 IIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLLAS 349 II+L + + ++A+G+E ++Q ++ ER + ++G S PLPA+ L Sbjct: 805 IINLGHNMGLGLVAEGVERQEQLHFLEERNCQEVQGYYFSKPLPAETLQPLLKNG 859 >UniRef50_B3PHI4 Sensory box/GGDEF family protein n=1 Tax=Cellvibrio japonicus Ueda107 RepID=B3PHI4_CELJU Length = 595 Score = 533 bits (1375), Expect = e-150, Method: Composition-based stats. Identities = 63/356 (17%), Positives = 142/356 (39%), Gaps = 13/356 (3%) Query: 1 MNTIKIKLNLIDYDSIVNIEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIKT-VSCQ 59 + + + L + +E + + ++LS ++ V+ R SI + + Sbjct: 232 LGGDEFVILLPE------LESHDQAARVAQKILSAAIQPLDVHGQECRVTASIGICLYPE 285 Query: 60 KMKLYKKLNVKSDLTLWRDVFLRFKAYLQPK-NIICDNFNSSVLPVVSSKGESMAHYNIY 118 + + L +D+ ++R Y ++ + +L K + ++ Sbjct: 286 DAEDEQALMKNADIAMYRAKEEGKNNYQFYSPDLKVRSLERLMLENNLRKALERHEFFLH 345 Query: 119 YQPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINKLFSP-- 176 YQ N K G IAG + + ++ + + + I + +L + + Sbjct: 346 YQAKRNLKTGKIAGVEALVRWQHPELGTISP-AHFIPLAEETGLIVHLGRWVLRAACTQG 404 Query: 177 --IKNNLPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRR 234 + I +N++ ++ + + ++ G L ++ + + R Sbjct: 405 VIWQQQGLPPICIAVNLSARQFFDDNLINDIANALRESGLAPELLEMEITEGMIMQDAER 464 Query: 235 YQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATT 294 L I+ V L+++DFG+GY+ L+H++ P + + + DI +N I Sbjct: 465 AIRILTGIKALGVRLAIDDFGVGYSSLAHIKRFPIDTLKVDSSFIRDIPANREDRAITEA 524 Query: 295 IIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLLASL 350 II + K L + VIA+G+ET++Q ++ + +G S P+ + F R +LA + Sbjct: 525 IIAMGKTLSLTVIAEGVETQEQENFLRDSACDQTQGYYFSKPVSPEEFTRFMLAHM 580 >UniRef50_Q47ED8 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q47ED8_DECAR Length = 827 Score = 531 bits (1370), Expect = e-149, Method: Composition-based stats. Identities = 58/352 (16%), Positives = 125/352 (35%), Gaps = 13/352 (3%) Query: 2 NTIKIKLNLIDYDSIVNIEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIKT-VSCQK 60 + + L + IE + I +LL+ + + + SI + Sbjct: 473 GGDEFVILLAE------IEQARDAAPIAEKLLAAFAEPCLIAGNELHVSLSIGISIYPDD 526 Query: 61 MKLYKKLNVKSDLTLWRDVFLRFKAYLQPK-NIICDNFNSSVLPVVSSKGESMAHYNIYY 119 + +D ++ Y + + + + +YY Sbjct: 527 GMDADTVMKNADTAMYHAKANGRNNYQFFTTEMNTRAVRRLFIEGNLRRALRQGEFMLYY 586 Query: 120 QPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINKLFSPIKN 179 QP + +G + G + I ++ + + + + + + Sbjct: 587 QPKIDLASGMMIGSEALIRWQDPEHGLVYPK-QFVPIAEESGLIVPIGSWVLREACRQVR 645 Query: 180 NLPHG----FFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRY 235 +++NI+ + D +K G L L+ + ++ Sbjct: 646 AWQESGLVAVPVSVNISAVEFRHKDFLEGVALILKETGMLPSYLELELTESILMHDAESS 705 Query: 236 QSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTI 295 + L ++ + L+++DFG GY+ LS+L+ P + + + ++ HDI + I + Sbjct: 706 ATVLEALKTMGMQLAIDDFGTGYSSLSYLKRFPINTLKIDQSFVHDIAIDPDDASIVGAM 765 Query: 296 IDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLL 347 I + K L V+A+G+ET++Q ++ +G PLPAD F R LL Sbjct: 766 IGMGKNLKQRVVAEGVETEEQLAFLRTLHCDEGQGFLFGRPLPADEFARLLL 817 >UniRef50_C6X6V4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6X6V4_METSD Length = 1126 Score = 529 bits (1365), Expect = e-149, Method: Composition-based stats. Identities = 52/352 (14%), Positives = 127/352 (36%), Gaps = 13/352 (3%) Query: 2 NTIKIKLNLIDYDSIVNIEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIKT-VSCQK 60 + + + D + I ++++ L + + + + SI V Sbjct: 767 GGDEFVVLVEDCGDTDYLNT------IARKIMATLAQPFILVGRELFISASIGISVYPDD 820 Query: 61 MKLYKKLNVKSDLTLWRDVFLRFK-AYLQPKNIICDNFNSSVLPVVSSKGESMAHYNIYY 119 L +D ++R ++ L + + ++Y Sbjct: 821 GLDTASLLKHADAAMYRAKESGKNTFRFYAAEANTNSVELLTLENNLRRAVERNEFVLHY 880 Query: 120 QPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHI----NKLFS 175 QP + ++ I G + + ++ + + I + + I + Sbjct: 881 QPKVDLRSQKIIGAEAVVRWQHPELGMLSP-MQFIPLAEETGLIIDIGAWIMRESCRQAV 939 Query: 176 PIKNNLPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRY 235 + + +N++ + + + G L L+ + ++ R Sbjct: 940 EWQQLTGQNVRVAVNLSARQFRDETLRQTIADALTESGLTPDCLELEITESMIMHNAERA 999 Query: 236 QSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTI 295 + L+ + ++ ++DFG GY+ +L++ P + + ++ DI + I I Sbjct: 1000 REVLQHFHDLGAHVLIDDFGTGYSSFGYLKHFPIDSLKIDRSFVRDIPDDVDDMAITQAI 1059 Query: 296 IDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLL 347 I ++ L I V+A+G+ET++Q ++ ++G ++G S PL + FVR L Sbjct: 1060 IAMAHSLQIKVVAEGVETQEQLAFLKKQGCDQIQGFLFSEPLHSHDFVRMLK 1111 >UniRef50_A1K5K2 Conserved hypothetical signaling protein n=2 Tax=Proteobacteria RepID=A1K5K2_AZOSB Length = 1089 Score = 528 bits (1362), Expect = e-148, Method: Composition-based stats. Identities = 59/357 (16%), Positives = 134/357 (37%), Gaps = 8/357 (2%) Query: 2 NTIKIKLNLIDY-DSIVNIEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIK-TVSCQ 59 +L ++ + ++ + + ++L L + +N SI ++ + Sbjct: 727 GDTVARLGGDEFMVVMSDMSAEDAAAALAAKVLESLAEPMLLNGREIVATGSIGVSLYPR 786 Query: 60 KMKLYKKLNVKSDLTLWRDVFLRFK-AYLQPKNIICDNFNSSVLPVVSSKGESMAHYNIY 118 + L +D+ ++R L + L + ++ Sbjct: 787 DGEAAATLLKHADVAMYRAKELGRNRFQFYAPEMNERILERLELENSLRRALENDELELH 846 Query: 119 YQPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHI----NKLF 174 YQP + ++G + G + I ++ + +D I + + + + Sbjct: 847 YQPKVSLRDGRVIGAEALIRWRHPQLGMVSP-ADFIPLAEETGLIVPIGEWVVDHACRQL 905 Query: 175 SPIKNNLPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRR 234 + + +N++ + + +L ++ + + R Sbjct: 906 RAWLDAGLPQISVAVNVSARQFQHEQLTHVLARALAAHRLPPGQLHVEVTESAVMCEPER 965 Query: 235 YQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATT 294 +LR ++N V +SL+DFG GY L++L+ P + + + D+ +++ IA Sbjct: 966 TIFTLRELKNIGVRISLDDFGTGYCSLNYLKRFPIDSIKIDRCFVTDLATSAEDAAIALM 1025 Query: 295 IIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLLASLK 351 I+ L+ L+ VIA+G+E + Q ++ G ++G S PLPA F R L A + Sbjct: 1026 IVSLAHSLNQTVIAEGVENEAQLDFLRRHGCDEMQGFLFSRPLPAAEFARLLAAGTR 1082 >UniRef50_C6ML43 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=1 Tax=Geobacter sp. M18 RepID=C6ML43_9DELT Length = 773 Score = 526 bits (1356), Expect = e-148, Method: Composition-based stats. Identities = 58/350 (16%), Positives = 137/350 (39%), Gaps = 13/350 (3%) Query: 2 NTIKIKLNLIDYDSIVNIEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIKT-VSCQK 60 K + L D + + + + + ++ + SI V + Sbjct: 289 GGDKFVVVLTDLRGNEEADRAVHV------IREAISLPFLMDGQELVISCSIGITVYPKD 342 Query: 61 MKLYKKLNVKSDLTLWRDVFLRFKAYLQP-KNIICDNFNSSVLPVVSSKGESMAHYNIYY 119 + + L +++ ++R + + + + + K + ++Y Sbjct: 343 GEDAQTLVKNAEVAMYRAKEQGRNCFRYYTRELNERVASRMSMEKHLRKALENEEFELWY 402 Query: 120 QPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINKLFS---- 175 QP + G ++G + I +N++ I + + + + Sbjct: 403 QPQADLNTGRLSGMEGLIRWRNAELGMVQP-GSFIPLAEETGLIVQIGEWVVRTACLQNR 461 Query: 176 PIKNNLPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRY 235 ++ + +N++P ++ ++ G + L L+ ++ + Sbjct: 462 RWQDAGLSPLTVAVNLSPRQFRDRELTGVIAGVLRETGLDPRYLGLEIVESMVMHDVESA 521 Query: 236 QSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTI 295 + L ++ V LS++DFG GY+ LS+L+ PF+ + + + DI ++ + IA +I Sbjct: 522 AAMLNELKALGVKLSMDDFGTGYSSLSYLKRFPFAKLKIDLSFVRDIMTDPGSAAIAKSI 581 Query: 296 IDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRK 345 I ++ L++ V+A+G+ET+ Q ++ G ++G LS PLPA F Sbjct: 582 ISMAHNLNLSVVAEGVETEGQLEFLRAHGCNEIQGYYLSRPLPAAEFEGM 631 >UniRef50_C1DA12 Sensory box/GGDEF family protein n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1DA12_LARHH Length = 1041 Score = 525 bits (1355), Expect = e-148, Method: Composition-based stats. Identities = 61/358 (17%), Positives = 136/358 (37%), Gaps = 7/358 (1%) Query: 2 NTIKIKLNLIDYDSIVNIEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIK-TVSCQK 60 + I +L ++ ++ SE+ +L+ + V+ +I ++ + Sbjct: 665 DDILARLGGDEFLLVLPGADERAASEVAACILTAMSVPVRVDGRELPTTPTIGVSLYPRD 724 Query: 61 MKLYKKLNVKSDLTLWRDVFLRFK-AYLQPKNIICDNFNSSVLPVVSSKGESMAHYNIYY 119 + L +D+ +++ L ++ L ++Y Sbjct: 725 GEEADDLIRNADIAMYQAKARGRNTFQLYTPDMNAAAAERLQLQGELRNAHLRGEIMLHY 784 Query: 120 QPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINKLFSP--- 176 QP + +G++ GC+ + K+ + I + L + Sbjct: 785 QPQIDVTDGHVVGCEALMRWKHPTLGMVSP-GRFIPLAEESGLIITLGNWAIREACRQAM 843 Query: 177 -IKNNLPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRY 235 + + +N++ + + L L+ + ++ + + Sbjct: 844 VWQRAGLPPLTVAVNLSGCQFQQSNFTAVVADALADTSLPPQYLELELTESIVMHDVEQV 903 Query: 236 QSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTI 295 ++L ++ V LS++DFG GY+ L++L+ P + + + D+E++ I I Sbjct: 904 IATLTELKALGVQLSIDDFGTGYSSLNYLKRFPVDLLKIDQGFVRDVETDPSDAAIVRAI 963 Query: 296 IDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLLASLKQV 353 I L K L++ +IA+G+ET+ Q Y+ GV +++G S PLPA+ L L V Sbjct: 964 IALGKILNLRLIAEGVETQGQLDYLHAAGVDFIQGYYFSRPLPAEDMATYLAQRLLPV 1021 >UniRef50_Q21WW2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=4 Tax=Proteobacteria RepID=Q21WW2_RHOFD Length = 874 Score = 525 bits (1355), Expect = e-148, Method: Composition-based stats. Identities = 54/352 (15%), Positives = 121/352 (34%), Gaps = 14/352 (3%) Query: 1 MNTIKIKLNLIDYDSIVNIEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIKT-VSCQ 59 + + L L + + I LL L + + SI + Sbjct: 510 LGGDEFILVLPE-------TNAAGAAHIAEMLLQSALVAFELEPHELTVTPSIGIALFPG 562 Query: 60 KMKLYKKLNVKSDLTLWRDVFLRFKAYLQPKNIICDNFNS-SVLPVVSSKGESMAHYNIY 118 + L+ +D ++R Y + L + ++ Sbjct: 563 DGSDFDTLSRCADAAMYRAKKDGRNNYRFFTAEMQARSERTLTLENALRRALERNQLQLH 622 Query: 119 YQPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINK----LF 174 YQP + +G + G + + + + A ++ I + + + + Sbjct: 623 YQPQISLASGRVVGAEALLRWSHPELGAV-PPAEFIPVAETCGLILPIGEWVLRTSVQQL 681 Query: 175 SPIKNNLPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRR 234 + +++N++ D+ + L L+ + + Sbjct: 682 KAWIDAGMLPIALSVNLSSVQFRHADLPELVTSILNEAQLPAHLLELELTENVAMTDPLG 741 Query: 235 YQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATT 294 + + + V +S++DFG GY+ LS+L+ + + ++ DI +S I Sbjct: 742 AIAVMNNLHERGVRMSIDDFGTGYSSLSYLKKFRVYKIKIDQSFVRDITEDSDDKAIVGA 801 Query: 295 IIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKL 346 II ++ L + IA+G+ET+ Q ++ +G ++G S PLP + F + Sbjct: 802 IISMATSLGMQTIAEGVETEGQLEFLKAKGCTEVQGYYFSRPLPVEQFEAFM 853 >UniRef50_A6T1A8 Sensory box/GGDEF family protein n=1 Tax=Janthinobacterium sp. Marseille RepID=A6T1A8_JANMA Length = 910 Score = 525 bits (1353), Expect = e-147, Method: Composition-based stats. Identities = 59/353 (16%), Positives = 130/353 (36%), Gaps = 11/353 (3%) Query: 1 MNTIKIKLNLIDYDSIVNIEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIKT-VSCQ 59 + + L L + + S++ ++ ++K ++ + S+ V Sbjct: 554 LGGDEFVLVLPECGDGPS----GYSSDVIQRIMEAVVKPLTIQGSEFFLSCSMGIAVYPN 609 Query: 60 KMKLYKKLNVKSDLTLWRDVFLRFK-AYLQPKNIICDNFNSSVLPVVSSKGESMAHYNIY 118 L +D+ ++R L + + + ++ Sbjct: 610 DGADPTTLLAHADVAMYRSKELGRNNFQFYTPAMNDQALERLRIEGELRHAIELNELVLH 669 Query: 119 YQPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHI----NKLF 174 YQP + G I G + + + I+ + + + + Sbjct: 670 YQPQVDLHTGAIVGLEALVRWNHPILGMVQP-GSFISLAEETGLIIPIGAWVLQTACRQA 728 Query: 175 SPIKNNLPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRR 234 ++ I +N++ + ++ G E L ++ + + I R Sbjct: 729 KAWQDMGFTQLRIAVNLSARQFTQASLLESIKDTLQETGLEARFLEIELTESSVMADIER 788 Query: 235 YQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATT 294 +LR +++ V LS++DFG G++ L++L+ P + + ++ DI N I ++ Sbjct: 789 NILTLRDLKSLGVQLSVDDFGTGHSSLAYLKRFPIDTLKIDRSFVRDIAINQDDASIVSS 848 Query: 295 IIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLL 347 II L+ L ++VIA+G+ET Q + +G ++G PLP+D LL Sbjct: 849 IISLAHNLKLNVIAEGVETASQMDILRAQGCNEIQGYYFCKPLPSDQIETLLL 901 >UniRef50_A1KA22 GGDEF/EAL/PAS/PAC/GAF-domain containing protein n=1 Tax=Azoarcus sp. BH72 RepID=A1KA22_AZOSB Length = 1006 Score = 524 bits (1351), Expect = e-147, Method: Composition-based stats. Identities = 49/349 (14%), Positives = 134/349 (38%), Gaps = 7/349 (2%) Query: 7 KLNLIDYDSIVNIEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIKTV-SCQKMKLYK 65 +L ++ ++ + + +LL + + ++ SI + Sbjct: 647 RLGGDEFVFLLPDTDAEGAARVAAKLLEAVAQPLVLDHQELTVTPSIGIAMYPDDGTDFD 706 Query: 66 KLNVKSDLTLWRDVFLRFK-AYLQPKNIICDNFNSSVLPVVSSKGESMAHYNIYYQPIYN 124 L+ +D +++ + + + + +L ++++YQP + Sbjct: 707 TLSRNADAAMYQAKREGRNGFRFFTEAMQARSTRTLLLANALRHALDRGQFSLHYQPQVS 766 Query: 125 AKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINKLF----SPIKNN 180 +G + G + + + + + + + ++ ++ + + + + Sbjct: 767 LADGRVVGAEALLRWTHPEFGPVSP-GEFVPIAESNGLIAQIGEWVLREAVAQSRRWLDE 825 Query: 181 LPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSLR 240 + +N++ ++ I+ G ++ L+ + + + + Sbjct: 826 GLPPLVMAVNLSAAQFRNPNLPELVSQVIEEAGLPPHQVELELTEAVAMDDPQSAVRVMD 885 Query: 241 RIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSK 300 + + +S++DFG GY+ L +L+ + + ++ DI + I + II L+ Sbjct: 886 ALFARGIRMSIDDFGTGYSSLGYLKRFKVGKLKIDQSFVRDIGDDPDDKAIVSAIIHLAG 945 Query: 301 QLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLLAS 349 L + +A+G+ET Q ++ ++G ++G S PLPA+AFV L S Sbjct: 946 SLGMLTVAEGVETLDQLDFLRQQGCDTVQGYYFSRPLPAEAFVGYLQES 994 >UniRef50_Q1K3I2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1K3I2_DESAC Length = 791 Score = 524 bits (1351), Expect = e-147, Method: Composition-based stats. Identities = 56/352 (15%), Positives = 145/352 (41%), Gaps = 13/352 (3%) Query: 1 MNTIKIKLNLIDYDSIVNIEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIKT-VSCQ 59 M + + + D + + +S + + +L ++++ S+ ++ Sbjct: 438 MGGDEFLIIIEDIKELSH------VSTVAKNFIDTILPSFTIDGHELFITPSMGISIAPT 491 Query: 60 KMKLYKKLNVKSDLTLWRDVFLRFK-AYLQPKNIICDNFNSSVLPVVSSKGESMAHYNIY 118 + K+L +++ +++ L + L K + + +Y Sbjct: 492 DTQHPKELLAFAEIAMYQAKGLGGNKCQFYTAEMNSRAKTRIELESYLRKAVNQDQFVLY 551 Query: 119 YQPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINKLFS--- 175 YQP ++ ++G + GC+ + ++ + +D I + + + + Sbjct: 552 YQPQFDIQSGELVGCEALLRWQHPQMGMISP-NDFIPLAEETGVIIEIGEWVLQEACLQN 610 Query: 176 -PIKNNLPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRR 234 ++ + +NI+P ++ G + L L+ + + I Sbjct: 611 KKWQDAGHSPIRVAVNISPRQFREPGFLEMIERVVQTTGIKPEWLELEITESLLMDDIDS 670 Query: 235 YQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATT 294 + L++++ ++L+++DFG GY+ LS+L+ P S + + ++ DI ++ I Sbjct: 671 AINILKQLKAKGIHLAIDDFGTGYSSLSYLKRFPLSRLKIDRSFVRDITTDDNDASITKA 730 Query: 295 IIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKL 346 +I L+ +++ V+A+GIET++Q ++ E+G + +G S P+ + F Sbjct: 731 VIALAHSMNLKVVAEGIETQEQLLFLKEKGCEVGQGYLYSPPVAKEPFDHFF 782 >UniRef50_Q1K234 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1K234_DESAC Length = 766 Score = 524 bits (1351), Expect = e-147, Method: Composition-based stats. Identities = 60/347 (17%), Positives = 136/347 (39%), Gaps = 8/347 (2%) Query: 7 KLNLIDYDSI-VNIEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIK-TVSCQKMKLY 64 +L ++ + ++ P + ++L+ + + + R SI ++ + + Sbjct: 411 RLGGDEFAIVMTHVNHPADARIMAQKILNAFEQPFPLGNRELRITTSIGASLYPRDGEQS 470 Query: 65 KKLNVKSDLTLWRDVFLRFKAYLQ-PKNIICDNFNSSVLPVVSSKGESMAHYNIYYQPIY 123 + L +D +++ + + + + L + + + ++YQP Sbjct: 471 EDLLRHADAAMYQAKKQGGNGFQFCSEEMDTRAHKALELEGDLRQALQLGSFVLHYQPKV 530 Query: 124 NAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINKLFSP----IKN 179 +G I GC+ + + D + D D I + L + + + Sbjct: 531 KIASGKIDGCEALVRWNHPDKGMISPD-DFIPLAEETGLIIALGEWVLREACRQFKAWQA 589 Query: 180 NLPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSL 239 I +N++ L D + F + L L+ + + R L Sbjct: 590 QGLPPIKIAVNLSARQFLQSDFVESIQTILHEFDIDPHWLDLELTESMVMEDPDRIAKLL 649 Query: 240 RRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLS 299 ++ LSL+DFG GY+ L++L+ P + + ++ D+ S++ +A ++I ++ Sbjct: 650 AELKQIGFALSLDDFGTGYSSLNYLRRFPIDCLKIDRSFILDVASDATAASVANSVIGIA 709 Query: 300 KQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKL 346 L I IA+G+ET++Q ++ ++G S PLPA+ L Sbjct: 710 HSLGIHAIAEGVETREQYAFLAMCECDSIQGYLFSKPLPANDLAALL 756 >UniRef50_Q1H367 Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) n=1 Tax=Methylobacillus flagellatus KT RepID=Q1H367_METFK Length = 1070 Score = 523 bits (1349), Expect = e-147, Method: Composition-based stats. Identities = 61/352 (17%), Positives = 136/352 (38%), Gaps = 13/352 (3%) Query: 2 NTIKIKLNLIDYDSIVNIEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIKT-VSCQK 60 + + + D+ IE L++ + +++ L + + + + + SI V Sbjct: 699 GGDEFVVLVEDF-----IEQQYLVN-VARKIMHALAQPFILMQQELYISASIGISVYPDD 752 Query: 61 MKLYKKLNVKSDLTLWRDVFLRFK-AYLQPKNIICDNFNSSVLPVVSSKGESMAHYNIYY 119 L +D+ ++R + + ++ + L + +++ Y Sbjct: 753 GVDISSLLKNADMAMYRAKDDGKNTFHFYSADGNANSVSRLTLENSLRRALERNEFSLLY 812 Query: 120 QPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINKLFSP--- 176 Q + NI G + I +++ + D I + + + + Sbjct: 813 QAKLDLAEQNIIGAEALIRWHSAELGMVSPQ-DFIPVAEETGMIIEIGEWVLQQACRDAC 871 Query: 177 -IKNNLPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRY 235 + + +NI+ + + + ++ G L L+ + + R Sbjct: 872 HWQEVAGRPIRVGVNISARQFREDSLYQAISNALEESGLTPNCLELEITESMIMQNAERA 931 Query: 236 QSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTI 295 L+ RN Y+ ++DFG GY+ L +L++ P + + ++ DI +S I I Sbjct: 932 SQMLQHFRNLGSYVLIDDFGTGYSSLGYLKHFPIDSLKIDRSFVRDIPQDSDDMAITQAI 991 Query: 296 IDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLL 347 I ++ L I+V+A+G+ET+ Q ++ +G L+G S PL + FV L Sbjct: 992 IAMAHSLKINVVAEGVETQAQLEFLRGQGCDQLQGYIFSRPLVVEDFVGLLR 1043 >UniRef50_C5V3L4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V3L4_9PROT Length = 900 Score = 523 bits (1348), Expect = e-147, Method: Composition-based stats. Identities = 62/358 (17%), Positives = 140/358 (39%), Gaps = 10/358 (2%) Query: 2 NTIKIKLNLIDYDSIVNIEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIKTVSCQK- 60 + + L +D ++ + ++ + L + Y + SI Sbjct: 539 GGDEFVVLLEGFDENP-LDAASQAETVGEQIFAALRQPYLIGTHEYHGTSSIGATLFNDK 597 Query: 61 MKLYKKLNVKSDLTLWRDVFLRFKAYLQPKNIICDNF-NSSVLPVVSSKGESMAHYNIYY 119 + +L ++D+ +++ + + + L K + ++Y Sbjct: 598 QQSIDELMKQADIAMYQAKKEGRNVLRFFDPQMQETIAKRTALEGDLRKAIENHQFQLHY 657 Query: 120 QPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINKLFSPIKN 179 Q + ++ + G + I + + + D I + + + + + Sbjct: 658 QIQVD-ESRHPFGAEALIRWFHPEHGMVSPD-QFIPLAEESDLILPIGYWVLETACARIQ 715 Query: 180 NLPH-----GFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRR 234 H GF +++N++ + D + I+ + L L+ + L I Sbjct: 716 RWQHDAKTSGFVLSVNVSAKQFRQTDFVNQVQSLIQQYEINPSLLKLELTESMLLDNIED 775 Query: 235 YQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATT 294 +++ ++ V SL+DFG GY+ L +L+ +P + + ++ DI ++ I T Sbjct: 776 TIATMSALKELGVKFSLDDFGTGYSSLQYLKRLPLDQLKIDQSFVRDIAVDASDRAIVRT 835 Query: 295 IIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLLASLKQ 352 II ++ L +DVIA+G+ET++Q ++ +G K +G P+P + F L SL Q Sbjct: 836 IIAMAHSLDLDVIAEGVETEEQQKHLSSKGCKNFQGYLFGKPVPIEQFETSLRKSLFQ 893 >UniRef50_Q3JBM4 Sensor protein n=4 Tax=Bacteria RepID=Q3JBM4_NITOC Length = 1499 Score = 523 bits (1348), Expect = e-147, Method: Composition-based stats. Identities = 70/357 (19%), Positives = 141/357 (39%), Gaps = 7/357 (1%) Query: 2 NTIKIKLNLIDYDSIVN-IEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIKT-VSCQ 59 N + +L ++ I+ IE P + +E+ ++ S L K ++ + + SI + Sbjct: 1126 NDMVARLGGDEFTVILEKIESPRVAAEVAAKICSVLSKVFAFSGQEMYISTSIGISLYPG 1185 Query: 60 KMKLYKKLNVKSDLTLWRDVFLRFKAYLQPKNIICDNFNSSVLPVVSSKGESMAHYNIYY 119 + L +D ++R K + L + +YY Sbjct: 1186 DGEDVSTLVKHADTAMFRAKEQGNSYQFYEKGMETAAVKRLGLEAELRRALEQNELALYY 1245 Query: 120 QPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINKLFSPIKN 179 QP N G IA + I + + S+ I ++ + I + Sbjct: 1246 QPQINLGTGEIATLETLIRWHHPEHGLI-PPSEFIPLAEETGLIASIGAWILREACTQMQ 1304 Query: 180 NLPH----GFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRY 235 + F I +N++ ++ D+ + + +K G L L+ + + Sbjct: 1305 SWLQRGFGPFHIAVNVSGRELEREDLVDKIVTILKETGLPPKWLELEITESVVMKGAGAA 1364 Query: 236 QSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTI 295 RR+R + +++DFG GY+ L++L++ P + + + HD+ SN I I Sbjct: 1365 IPKFRRLREMGIKFAIDDFGTGYSSLNYLKSFPVDILKIDRCFIHDVVSNPDDAAIIKGI 1424 Query: 296 IDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLLASLKQ 352 I L+ L + V+A+G+ET+ Q ++ +G LS PL A + +L+ ++ Sbjct: 1425 IALAHSLRLKVVAEGVETQAQEEFLKAHQCDRFQGFYLSEPLSAAEIEQAILSWGRE 1481 >UniRef50_A4G4R7 Putative uncharacterized protein n=1 Tax=Herminiimonas arsenicoxydans RepID=A4G4R7_HERAR Length = 859 Score = 522 bits (1346), Expect = e-147, Method: Composition-based stats. Identities = 57/349 (16%), Positives = 136/349 (38%), Gaps = 7/349 (2%) Query: 7 KLNLIDYDSIVNIEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIKT-VSCQKMKLYK 65 +L ++ ++ +I EL+ + + Y + SI V ++ Sbjct: 509 RLGGDEFVLLLPGANRESAKKIAQELMRAINEPYRIGSHELNVMASIGIAVYPADGMDFE 568 Query: 66 KLNVKSDLTLWRDVFLRFKAYL-QPKNIICDNFNSSVLPVVSSKGESMAHYNIYYQPIYN 124 L +D+ ++R AY + + + + + + +++YQP + Sbjct: 569 TLCKNADVAMYRAKQEGRNAYRSFTQEMQAYSTRYLQVLNALRQAIAQEQLHVHYQPQIS 628 Query: 125 AKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINK----LFSPIKNN 180 +G++ G + + + + + ++ I + + + + Sbjct: 629 LISGDVIGAEALLRWHHPELGNISP-AEFIPIAEESGLILQIGEWVLRVAVAQAKKWHQL 687 Query: 181 LPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSLR 240 I +N++ + + +K L L+ + ++ + + + Sbjct: 688 GLDKLIIAVNLSAVQFRHAGLPNLVMQILKEEDFPPQYLELELTEGVAMHDPQGAIAMMN 747 Query: 241 RIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSK 300 + V +S++DFG GY+ LS+L+ + + ++ DI +++ I + II ++K Sbjct: 748 SLHERGVRMSIDDFGTGYSSLSYLKQFKAYKLKIDQSFVRDISTDAEDKAIVSAIIGMAK 807 Query: 301 QLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLLAS 349 L + IA+G+ET +Q ++ E G +G S PLPA F +L + Sbjct: 808 NLGLQTIAEGVETAEQQAFLREEGCHEAQGYHYSKPLPAADFETFILGA 856 >UniRef50_C0ZBT5 Probable signaling protein n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZBT5_BREBN Length = 815 Score = 522 bits (1346), Expect = e-147, Method: Composition-based stats. Identities = 59/347 (17%), Positives = 123/347 (35%), Gaps = 10/347 (2%) Query: 7 KLNLIDYDSIVNIEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIKT-VSCQKMKLYK 65 +L ++ + EI +++ + + +++ I SI + + Sbjct: 462 RLGGDEFAIFLTGVTHREAGEIAQRIITSMSESITLDHIEIFITPSIGISMYPDDGDDIE 521 Query: 66 KLNVKSDLTLWRDVFLRFKAYLQPKNIICDNF-NSSVLPVVSSKGESMAHYNIYYQPIYN 124 L +D ++ Y + L K + ++YQP + Sbjct: 522 ALLKHADAAMYLAKEQGKNNYQFFSEELHQVLAKKLQLERELRKALDEKQFTLHYQPKIH 581 Query: 125 AKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINKLFSP----IKNN 180 + G I G + I + D I + L + + + Sbjct: 582 LQTGQIIGMEALIRWDHPDLGLI-PPIQFIPIAEETGLIVPLGEWVMRTACQQTKAWQEA 640 Query: 181 LPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSLR 240 + +NI+ + ++ ++ G L L+ + L + L Sbjct: 641 GFTQLAVAVNISLRQFMQNNLIEMITSILEETGLAPQYLELEITESMAL-NVDYTIRILN 699 Query: 241 RIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSK 300 R++ V +S++DFG GY+ LS+L P + + ++ ++ N I TII ++ Sbjct: 700 RLKALGVSISIDDFGTGYSSLSYLSQFPIDRLKIDQSFLRNL--NPQNQAIIKTIIHMAH 757 Query: 301 QLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLL 347 + I VIA+G+ET + ++ E+ ++G S PLP L Sbjct: 758 NMKIAVIAEGVETHEHVDFLKEQLCNEVQGYFYSKPLPTKEIDSFLQ 804 >UniRef50_Q47H73 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q47H73_DECAR Length = 585 Score = 521 bits (1344), Expect = e-146, Method: Composition-based stats. Identities = 57/347 (16%), Positives = 132/347 (38%), Gaps = 7/347 (2%) Query: 7 KLNLIDYDSIVNIEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIKT-VSCQKMKLYK 65 +L ++ + E+ L+ + + V S+ + + + Sbjct: 233 RLGGDEFIFAMPGFHTAAAVEVARRLVEVFSRPFEVAGHELTVTPSLGISIYPHDGRDLE 292 Query: 66 KLNVKSDLTLWRDVFLRFKAYL-QPKNIICDNFNSSVLPVVSSKGESMAHYNIYYQPIYN 124 L +D ++R + A+ + + ++ + + ++YQP+ N Sbjct: 293 TLLRNADTAMYRAKEMGRNAFQFYSSEMNTTTLDRLLMESNLRRALVQNEFILHYQPLVN 352 Query: 125 AKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHI----NKLFSPIKNN 180 + G I G + I + + D I+ ++ + + + + Sbjct: 353 LETGLIIGVEALIRWLHPELGLIMPD-RFIHVAEETGLINPIGDWVLCEACRQAKAWCDA 411 Query: 181 LPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSLR 240 + +N+ P + G + RL L+ + + ++ +L Sbjct: 412 GLPPICMAVNVAPVQFRQAGFVEMVAGALATSGLDASRLELELTERTVMHDADINMGTLS 471 Query: 241 RIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSK 300 + V LSL+DFG GY+ L++L+ P + + ++ +D+E++ IA+TI+ + + Sbjct: 472 ALHRMGVELSLDDFGTGYSSLAYLKRFPVGKLKIDRSFVNDLETDPDDWAIASTIVSMGR 531 Query: 301 QLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLL 347 L + V+A+G+E +Q + + G +G S P+ AD L Sbjct: 532 SLRMTVLAEGVEKVEQLALLRKMGCDMAQGYYFSRPMSADGMADMLR 578 >UniRef50_A0YLL7 Putative uncharacterized protein n=1 Tax=Lyngbya sp. PCC 8106 RepID=A0YLL7_9CYAN Length = 872 Score = 521 bits (1344), Expect = e-146, Method: Composition-based stats. Identities = 58/358 (16%), Positives = 134/358 (37%), Gaps = 13/358 (3%) Query: 2 NTIKIKLNLIDYDSIVNIEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIKT-VSCQK 60 + L ++ +++I +L +L + ++ S+ + Sbjct: 514 GGDEFTLLFP------HLTSTDEITKIAHRILDKLSIPFVIDNQELYVTASLGIALCPYD 567 Query: 61 MKLYKKLNVKSDLTLWRDVFLRFKAYL-QPKNIICDNFNSSVLPVVSSKGESMAHYNIYY 119 + + L +D ++R + + + + N L + + +YY Sbjct: 568 AEDAQTLLKHADAAMYRAKKQGRNNFQVFAEEMHREALNQLTLEADLRRALIKEEFLLYY 627 Query: 120 QPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINKLFSP--- 176 QP G I G + I ++ D I ++ + + + Sbjct: 628 QPQVEISTGKIVGLEALIRWQHPTLGFVPPD-QFIPLAEEIGLIAPIGQWVLQTACIQHQ 686 Query: 177 -IKNNLPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRY 235 + I +N++ + L ++ + L L+ + + + Sbjct: 687 SWQAEGLPPVRIAVNLSARQFHQSQLINIILQTLETTEIDPQYLELEITESAAMQDVEFT 746 Query: 236 QSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTI 295 +L+ +R ++++++DFG GY+ L+ L++ P + + + ++ DI NS IA TI Sbjct: 747 IQTLQELREMGLHITIDDFGTGYSSLNVLKHFPLNTLKIDRSFVQDIVENSRDAAIAQTI 806 Query: 296 IDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLLASLKQV 353 + LS+ L + V+A+G+ET +Q ++ +G P+PA + L S + Sbjct: 807 VALSQGLKLKVVAEGVETPQQLSFLRSIHCDLAQGYYFCPPVPAIEIAKLLRQSDFSL 864 >UniRef50_A3DCG7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Clostridium thermocellum RepID=A3DCG7_CLOTH Length = 862 Score = 521 bits (1343), Expect = e-146, Method: Composition-based stats. Identities = 61/352 (17%), Positives = 135/352 (38%), Gaps = 8/352 (2%) Query: 3 TIKIKLNLIDYDSIV-NIEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIKT-VSCQK 60 ++ ++ I I+ + +L + + + + S+ + Sbjct: 499 DTVARIGGDEFIIIQPQIKDINDATRAADRILKKFQQPWILEGKEYYITASMGIGIYPNG 558 Query: 61 MKLYKKLNVKSDLTLWRDVFLRFKAYL-QPKNIICDNFNSSVLPVVSSKGESMAHYNIYY 119 + + + +D L+R L Y +++ + + + ++Y Sbjct: 559 GEDPQTIFKNADTALYRAKELGRNNYQLYTESMNQKVLQRLDIENSLRRAIEKEEFVLFY 618 Query: 120 QPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINKLFSPIKN 179 QP + K G I G + + + D + I + + + + + Sbjct: 619 QPQIDIKTGKIVGFEALLRWYHPDYGLM-PPMEFIPVAEDSGLIVVIGEWVLETACRQNK 677 Query: 180 NL----PHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRY 235 I++N++ +I G L L+ + + + Sbjct: 678 KWIECGLEPHLISVNLSARQFQRSNIVEVIDRIRSSTGLAPELLELEITESTAMQDLSFT 737 Query: 236 QSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTI 295 L ++R + +SL+DFG GY+ L++L+ +P + + K+ DI +NS + IA T+ Sbjct: 738 IDVLNQLRKKGIRVSLDDFGTGYSSLNYLRQLPIDTLKIDKSFVQDIRANSKEEAIAKTV 797 Query: 296 IDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLL 347 I L+ +L + V+A+G+ETK+Q ++ + +G S PLPA+ + L Sbjct: 798 ISLAHKLDLTVVAEGVETKEQLLFLKKEKCDKAQGYLFSKPLPAEEIEKMLR 849 >UniRef50_B9Z1R5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z1R5_9NEIS Length = 1086 Score = 520 bits (1342), Expect = e-146, Method: Composition-based stats. Identities = 61/353 (17%), Positives = 131/353 (37%), Gaps = 8/353 (2%) Query: 7 KLNLIDYDSIV-NIEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIKT-VSCQKMKLY 64 +L ++ +V + LS + ++L+ L + + S+ V Sbjct: 724 RLGGDEFTLLVSHFASQATLSTLAEDILAVLAQPLWLEGQELIVTGSLGISVYPHDGSDA 783 Query: 65 KKLNVKSDLTLWRDVFLRFKAYLQPKN-IICDNFNSSVLPVVSSKGESMAHYNIYYQPIY 123 + L +D+ ++R Y + L + + +++QPI Sbjct: 784 RTLLKNADVAMYRAKEAGKNTYQFFAAEMNAQAIERLQLERGLRQALERGEFELHFQPIV 843 Query: 124 NAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINKLFSPIKNNLP- 182 A + +V + ++ + + I + + + + Sbjct: 844 AAATYRLEALEVLLRWRHPELGLVSP-VRFIPLAEETGLIRPIGDWVIRQACRQLAEWDC 902 Query: 183 ---HGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSL 239 H + IN++ + + + G RL L+ + + S L Sbjct: 903 LGLHVPRLAINLSARQFEQQGLIMQVAGALAEAGIAAGRLELEMTESMVMQNPSEAVSLL 962 Query: 240 RRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLS 299 ++ V LS++DFG GY+ LS+L+ P + + ++ + + IA I+ ++ Sbjct: 963 GELKALGVRLSIDDFGTGYSSLSYLKRFPLDTLKIDRSFIEGLPGDGDNAAIAEAILAMA 1022 Query: 300 KQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLLASLKQ 352 ++L V+A+G+ET+ QA ++ +G + L+G S PLPA L Q Sbjct: 1023 RKLSFSVVAEGVETEAQAAFLCAKGCQLLQGYLFSRPLPAAELPAFLQQRSPQ 1075 >UniRef50_C6P464 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P464_9PROT Length = 1347 Score = 520 bits (1342), Expect = e-146, Method: Composition-based stats. Identities = 67/359 (18%), Positives = 136/359 (37%), Gaps = 14/359 (3%) Query: 1 MNTIKIKLNLIDYDSIVNIEFPCLLSEIEIELLSQLLKGYSVNE-ISKRRNRSIKT-VSC 58 + + L L +I P + + LL L + + ++ SI + Sbjct: 994 LGGDEFLLVLE------HINEPEDSAIVARSLLETLAQPFVLHGEREIFIGASIGISIFP 1047 Query: 59 QKMKLYKKLNVKSDLTLWRDVFLRFKAY-LQPKNIICDNFNSSVLPVVSSKGESMAHYNI 117 ++L +D + + L Y +++ + L + + Sbjct: 1048 NDGDSAEQLIQHADAAMHQAKTLGRNTYHFYTEDLSRASNEHLELENRLRHAITANQLRV 1107 Query: 118 YYQPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINKLFS-- 175 YYQP + G+I G + + ++ + I + + + K Sbjct: 1108 YYQPQVDIATGHIIGAEALVRWQDPERGLVQP-GQFIPLAEETGLIGAIGEWVLKETCLQ 1166 Query: 176 --PIKNNLPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIR 233 + + +N++P L +I + G RL L+ + + Sbjct: 1167 GMRWIDAGLPFLTLAVNLSPHQFLRGNIAGLISKVLAETGFPADRLELELTESALMQQGE 1226 Query: 234 RYQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIAT 293 L +R ++ L+++DFG GY+ LS+L+ P + + K+ DI + IA Sbjct: 1227 DVIKMLHLLRAQDIRLAIDDFGTGYSSLSYLKRFPLDILKIDKSFVDDIPFHQDDMEIAA 1286 Query: 294 TIIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLLASLKQ 352 TII + L V+A+G+ET++Q ++ RG +G S P+PA+ F + L ++ + Sbjct: 1287 TIIAMGHILGFKVLAEGVETREQLEFLQARGCDLYQGYLTSPPIPAEEFEKLLKENMAR 1345 >UniRef50_Q1JZB1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JZB1_DESAC Length = 1092 Score = 520 bits (1340), Expect = e-146, Method: Composition-based stats. Identities = 60/357 (16%), Positives = 147/357 (41%), Gaps = 8/357 (2%) Query: 3 TIKIKLNLIDYDSIV-NIEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIKT-VSCQK 60 + +L ++ ++ N P + ++ ++ L + + +++ S + SI V+ Sbjct: 726 DVLARLGGDEFAILLFNCVTPVVGADTAQRVIDALSQPFQIDDYSLHVSASIGITVAPVD 785 Query: 61 MKLYKKLNVKSDLTLWRDVFLRFKAY-LQPKNIICDNFNSSVLPVVSSKGESMAHYNIYY 119 + +L +D+ +++ Y +++ +L S +YY Sbjct: 786 AREPDELIKCADIAMFKAKDAGRNTYKFYERSMNLKTHELLLLENDLRHALSRDQLELYY 845 Query: 120 QPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINKLFSP--- 176 QP + ++ I G + + + + + + I + + I + Sbjct: 846 QPQLDLQSNCIVGFEALLRWNHPERGLVSP-LEFIPLAEETGLIVSMGEWILRSACRQIR 904 Query: 177 -IKNNLPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRY 235 + +NI+ D+ ++ G L L+ + +Y I+ Sbjct: 905 TWNEEHGRQLRVAVNISARQFHHYDLVHCVEKVLEQTGVPTEWLELEITESLLMYDIQSS 964 Query: 236 QSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTI 295 ++ R++ V L+++DFG GY+ LS+L+ P + + K+ D+ +++ IA + Sbjct: 965 IETMMRLKKLGVRLAIDDFGTGYSSLSYLKKFPICSLKIDKSFVDDLLTDASDAAIAEST 1024 Query: 296 IDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLLASLKQ 352 + L+ ++ + V+A+GIE ++Q Y+ +RG ++ +G +S PLP + + Sbjct: 1025 LALASKMDLMVVAEGIEQQEQLDYLQQRGCQFGQGYLISRPLPVAQCTQFCRERFTE 1081 >UniRef50_C6XAD3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6XAD3_METSD Length = 751 Score = 519 bits (1339), Expect = e-146, Method: Composition-based stats. Identities = 71/358 (19%), Positives = 143/358 (39%), Gaps = 13/358 (3%) Query: 2 NTIKIKLNLIDYDSIVNIEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIKT-VSCQK 60 + + L + N P +E+ +LL+ Y + + SI V Sbjct: 401 GGDEFMILLPEL---TNYFSP---AEVAEKLLAAATVPYEIGSHEITVSASIGIAVFPDD 454 Query: 61 MKLYKKLNVKSDLTLWRDVFLRFKAYLQP-KNIICDNFNSSVLPVVSSKGESMAHYNIYY 119 + + L +D ++ L Y + + + L + + +YY Sbjct: 455 GENGELLTKNADAAMYHAKSLGRNNYQFFTRAMNERVMEIAELESKLRRAVERNEFVLYY 514 Query: 120 QPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINKLFSP--- 176 QP + + G + G + I ++ A D I + + + + + Sbjct: 515 QPKIDIRTGQVVGAEALIRWQHPSWGLVAPD-RFIPIAEDSGLIRPIGLWVMREACRQNQ 573 Query: 177 -IKNNLPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRY 235 + + +N++ + + +E + + G E L L+ + ++ Sbjct: 574 EWQAAGLARIPVAVNLSTVQLRQHNFLQEVSEILLMSGLEPDYLELEVTESVAIHAETEV 633 Query: 236 QSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTI 295 + L ++R+ V L+L+DFG GY+ LS+L+ +P + V + K+ DIE++ I T I Sbjct: 634 INWLHKLRSMGVKLALDDFGTGYSSLSYLKRLPINNVKIDKSFIRDIETDPDDATIITAI 693 Query: 296 IDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLLASLKQV 353 I +S L ++VIA+G+E Q ++ + G ++G S P+PAD F L + Sbjct: 694 IRMSHGLRLNVIAEGVENINQLEFLKKEGCDQMQGFIASRPVPADEFALLLQNWPTPI 751 >UniRef50_C5UZT1 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Gallionella ferruginea ES-2 RepID=C5UZT1_9PROT Length = 1301 Score = 519 bits (1338), Expect = e-146, Method: Composition-based stats. Identities = 51/354 (14%), Positives = 126/354 (35%), Gaps = 14/354 (3%) Query: 2 NTIKIKLNLIDYDSIVNIEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIKTV-SCQK 60 + L L D + + ++L + K + + SI Sbjct: 952 GGDEFILVLPD-------TDADGAAHVAEKILETVAKTCYIEQHELVVTPSIGIAMYPSD 1004 Query: 61 MKLYKKLNVKSDLTLWRDVFLRFKAYLQP-KNIICDNFNSSVLPVVSSKGESMAHYNIYY 119 + KL +D+ ++R + + + +L + S + ++Y Sbjct: 1005 GMDFDKLYQSADVAMYRAKQDGRNNFRFFTSEMQARSARRLLLENALRQALSRNQFELHY 1064 Query: 120 QPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINK----LFS 175 QP + ++G I G + + + + + + ++ I + + + + Sbjct: 1065 QPQISMQDGKIVGAEALLRWYHPELGSISP-AEFIPVAEESGLILSIGEWVLRTAVQQVK 1123 Query: 176 PIKNNLPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRY 235 ++ + IN++ + + + + L+ + + Sbjct: 1124 RWQDAGHPPVTVAINLSAVQFRQARLSELVMQILHEANLAPHWIELELTESVAMDNPLVA 1183 Query: 236 QSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTI 295 + + + +S++DFG GY+ LS+L+ + + + ++ D+ + + I T I Sbjct: 1184 IGVMNDLHGCGIRMSIDDFGTGYSSLSYLRKFKVNKLKIDQSFVRDLADDIESRAIVTAI 1243 Query: 296 IDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLLAS 349 I L+ + IA+G+ET Q ++ +G ++G S PL F +L Sbjct: 1244 ITLASSMGFQTIAEGVETAGQLAFLRLQGCNEVQGYYFSRPLTVALFEAFVLGH 1297 >UniRef50_Q2W807 Predicted signal transduction protein n=4 Tax=Magnetospirillum RepID=Q2W807_MAGSA Length = 880 Score = 519 bits (1338), Expect = e-146, Method: Composition-based stats. Identities = 59/361 (16%), Positives = 149/361 (41%), Gaps = 18/361 (4%) Query: 1 MNTIKIKLNLIDYDSIVNIEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIKT-VSCQ 59 + + + L + D ++E ++++ +++ + + + V++ SI V + Sbjct: 520 LGGDEFTVLLPELD---HLE---DVAKLAERVIAHVKQPFLVDDNELYVTTSIGIAVYPE 573 Query: 60 KMKLYKKLNVKSDLTLWRDVFLRFKAYL-QPKNIICDNFNSSVLPVVSSKGESMAHYNIY 118 + L +D ++R L +Y + +F + + + + Sbjct: 574 DGTTVEALIKNADTAMYRAKDLGRNSYQLYTAAMNARSFERLTMESSLRHALTREEFRLV 633 Query: 119 YQPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINKLFSP-- 176 YQ ++++G ++G + + + + + D I +S + + + Sbjct: 634 YQVKVDSEDGRMSGVEALVRWHHPEMGLVSP-VDFIPLAEAMGVISDIGEWVLRTACRQC 692 Query: 177 --IKNNLPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRR 234 + I +N++ + + D+ ++ G L L+ + + + Sbjct: 693 KHWMDLGLPPVRIAVNVSAQQFVETDVPEVVARALRETGLPPQYLELELTETVLMQRVDE 752 Query: 235 YQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESN-----SLTD 289 + L+ +R V +S++DFG GY+ LS+L+ +P + + ++ +DI Sbjct: 753 VVAVLKSLRAMGVRISIDDFGTGYSSLSYLKRMPIDALKVDRSFVNDIFDGQSKVTEDGA 812 Query: 290 IIATTIIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLLAS 349 I +TII+L+ L + IA+G+ET +QA ++ +G ++G +S P+ + + + Sbjct: 813 EIVSTIINLAHNLKLKAIAEGVETPEQAEFLRSKGCDEVQGYLISRPVSGEDLISLFDRN 872 Query: 350 L 350 L Sbjct: 873 L 873 >UniRef50_C7RJ77 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RJ77_9PROT Length = 1399 Score = 518 bits (1337), Expect = e-146, Method: Composition-based stats. Identities = 47/349 (13%), Positives = 128/349 (36%), Gaps = 7/349 (2%) Query: 7 KLNLIDYDSIVNIEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIKTV-SCQKMKLYK 65 +L ++ ++ + + +LL + Y + + + S + ++ Sbjct: 1051 RLGGDEFIVVLPSTDADGAAHVAAKLLEVMAPAYRIEQHELTCSLSAGIAMYPADGESFE 1110 Query: 66 KLNVKSDLTLWRDVFLRFKAYLQPKNIICDNFNS-SVLPVVSSKGESMAHYNIYYQPIYN 124 L++ +D ++R AY + + + + ++YQP + Sbjct: 1111 ALSMSADTAMYRAKQSGRNAYCFFTAEMQERSARNLQIENDLRRALENGELRLHYQPQFT 1170 Query: 125 AKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINK----LFSPIKNN 180 + + G + + ++ + + I + + + + + Sbjct: 1171 LADRRLVGAEALLRWQHPQLGMVSP-VEFIPIAEECGLILPIGEWVLRAAVSQLRVWQQE 1229 Query: 181 LPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSLR 240 + +N++ + + G L L+ + + +++ Sbjct: 1230 GLPPMTVAVNLSAVQFRQASLTDVVSRILDAEGLAAQFLELELTESVAMDNPLAAIATMD 1289 Query: 241 RIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSK 300 ++R V +S++DFG GY+ +S+L+ + + ++ D+ ++ + I T I L++ Sbjct: 1290 KLRALGVRMSIDDFGTGYSSMSYLKRFRVHKLKIDRSFVADLAADPEDEAIVTATISLAR 1349 Query: 301 QLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLLAS 349 L + IA+G+E++ Q ++ +G +G S PL F + A Sbjct: 1350 DLGLQTIAEGVESEAQLAFLRAKGCDEAQGYLFSRPLAPAQFAAFVRAH 1398 >UniRef50_B8HWB1 Diguanylate cyclase/phosphodiesterase with FHA and GAF sensor n=2 Tax=Cyanothece sp. PCC 7425 RepID=B8HWB1_CYAP4 Length = 884 Score = 518 bits (1336), Expect = e-145, Method: Composition-based stats. Identities = 63/358 (17%), Positives = 134/358 (37%), Gaps = 13/358 (3%) Query: 2 NTIKIKLNLIDYDSIVNIEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIKTVSCQ-K 60 + + L I +++ +LS L + + + SI Sbjct: 527 GGDEFTILLPQ------IHQVNDVAKTAQRMLSALEQPFHLENHELYITPSIGIAIYDLD 580 Query: 61 MKLYKKLNVKSDLTLWRDVFLRFKAYLQP-KNIICDNFNSSVLPVVSSKGESMAHYNIYY 119 + L +D+ L++ L Y + L + +YY Sbjct: 581 GHDGETLIKHADMALYQAKQLGRNTYQFFCSGLSNGAPERLNLEKSLRHALERQEFLLYY 640 Query: 120 QPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINKLFSP--- 176 QP N K G I G + + K+ + ++ + + + + Sbjct: 641 QPQVNIKTGKITGMEALLRWKHPEMGLVIPQL-FMSVAEESGLIVAIGEWVLRTACAQNK 699 Query: 177 -IKNNLPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRY 235 ++ I +N++ D+ + G L L+ + + I Sbjct: 700 TWQDQGLPPICIAVNLSARQFRQPDLTGMIARILDETGLPPQYLDLEITETTAIQDIEFT 759 Query: 236 QSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTI 295 + L+ +++ + +S++DFG GY+ L+HLQ P + + + ++ D+ +NS I T + Sbjct: 760 KRVLQELQDMGIQISMDDFGTGYSSLAHLQQFPLNTLKIDRSFVRDVAANSRDAQIVTAV 819 Query: 296 IDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLLASLKQV 353 I L++ L+++V+A+G+E +Q + + +G + PL ADA L + Q+ Sbjct: 820 IGLARGLNLNVVAEGVENDEQLNCLESLHCEEAQGYIFNRPLEADAATEILQLNSFQL 877 >UniRef50_Q1JXC9 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JXC9_DESAC Length = 888 Score = 518 bits (1335), Expect = e-145, Method: Composition-based stats. Identities = 65/356 (18%), Positives = 139/356 (39%), Gaps = 13/356 (3%) Query: 1 MNTIKIKLNLIDYDSIVNIEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIKT-VSCQ 59 ++ + + L ++I N + I E+ +L + V SI + Sbjct: 538 LSGDEFAIILDQLNNIEN------VILIAQEVNRRLAEMMVVEGYKLFLTASIGISLYPG 591 Query: 60 KMKLYKKLNVKSDLTLWRDVFLRFKAYLQPKN-IICDNFNSSVLPVVSSKGESMAHYNIY 118 K L +D +++ L Y + L + H +Y Sbjct: 592 DGKDVVSLLKCADAAMFKAKELGRDNYRFYTAGLNERASELLALEGALRQAVDKNHLVVY 651 Query: 119 YQPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINKL----F 174 +QP + I G + + ++ + + D I + + + + Sbjct: 652 FQPQVELASRRIIGAEALVRWQHPENGMISP-VDFIPMAEETGLIVSIGEWVLRQSCLQA 710 Query: 175 SPIKNNLPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRR 234 + I++N++ D+ ++ G L L+ + + + Sbjct: 711 RQWQVAGYPPMRISVNMSARQFRQKDLVPMVRRILQETGLSPEYLDLEITESILMNDVDG 770 Query: 235 YQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATT 294 L + + + LS++DFG GY+ L++L+ P Y+ + ++ D+ + IAT Sbjct: 771 AVERLVELHSLGIQLSIDDFGTGYSSLAYLKKFPIQYLKIDRSFVRDVIIDPNDAAIATA 830 Query: 295 IIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLLASL 350 +IDL++ ++++VIA+GIE + Q ++++RG Y +G S P+PA F + L+ Sbjct: 831 VIDLARNMNLNVIAEGIEQQDQHQFLLDRGCGYGQGYLFSRPIPAHEFEQLLVRQQ 886 >UniRef50_C6NZD9 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6NZD9_9PROT Length = 1149 Score = 517 bits (1334), Expect = e-145, Method: Composition-based stats. Identities = 49/351 (13%), Positives = 139/351 (39%), Gaps = 7/351 (1%) Query: 7 KLNLIDYDSIVNIEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIKT-VSCQKMKLYK 65 + ++ I+ + + +L+ + + + + SI + + ++ Sbjct: 800 RQGGDEFILILPGTDENGAAHVAAKLMEAVSQAFQFEQHELVATCSIGIAIYPHDGENFE 859 Query: 66 KLNVKSDLTLWRDVFLRFKAYLQP-KNIICDNFNSSVLPVVSSKGESMAHYNIYYQPIYN 124 L+ +D ++R + + + + L + +++YQP + Sbjct: 860 TLSKNADTAMYRVKHDGRNGFCFFTSEMQAHSARTLQLGNALRHALTRGQLHLHYQPQIS 919 Query: 125 AKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINK----LFSPIKNN 180 ++G++ G + + ++ + + + ++ I ++ ++ + + + ++ Sbjct: 920 TQDGHVVGAEALLRWQHPELGSISP-AEFIPIAEDNGQIIPIGEWVLRTAIKQLKDWMDS 978 Query: 181 LPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSLR 240 + +N++ ++ + L L+ + + + + Sbjct: 979 GLPPMIMAVNLSAAQFRQSNLMELVTSILDESKVPHRYLELELTEAVAMDDPQLAIGVMD 1038 Query: 241 RIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSK 300 ++ + +S++DFG GY+ LS+L+ + + ++ HDI + I II+++ Sbjct: 1039 KLHTGGIKMSIDDFGTGYSSLSYLKRFKVYKLKIDQSFVHDITDDPDDKAIVAAIINMAS 1098 Query: 301 QLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLLASLK 351 L + IA+G+ET Q ++ +G ++G S PLPA+ FV L + Sbjct: 1099 SLGMQTIAEGVETAGQLSFLRLQGCNEVQGYYFSKPLPAEQFVSYLQKQGQ 1149 >UniRef50_Q1JVV8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JVV8_DESAC Length = 764 Score = 517 bits (1334), Expect = e-145, Method: Composition-based stats. Identities = 66/354 (18%), Positives = 139/354 (39%), Gaps = 8/354 (2%) Query: 2 NTIKIKLNLIDYDSIV-NIEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIKTV-SCQ 59 N I +L ++ I+ + P ++ +LL QL++ V SI Q Sbjct: 410 NQILARLGGDEFAVIMEDCRHPQDAAKTAKKLLEQLIEPIHVQPNEIYLTASIGISSYPQ 469 Query: 60 KMKLYKKLNVKSDLTLWRDVFLRFKAYLQPKNIICDNFNSS-VLPVVSSKGESMAHYNIY 118 + K L +D+ + R Y + + L K + +Y Sbjct: 470 DGESPKTLMSHADIAMTRAKSEGKDRYQFFEREMTQTTKRVFELENDLRKAVARNELRVY 529 Query: 119 YQPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINKLFSP-- 176 YQP + I G + + ++ + +D I + + + + Sbjct: 530 YQPQIQLDSQQITGMEALVRWQHPQRGLISP-ADFIPLAEETGLIVSIGEWVLRQACQQV 588 Query: 177 --IKNNLPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRR 234 + + +N++P + R +K G L L+ + + I + Sbjct: 589 AMWHDQGLPAVTVAVNLSPLQFRHKALVRNVAKTLKETGINPACLELEVTESMIMDSIDK 648 Query: 235 YQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATT 294 +++ + L+++DFG GY+ LS+L+ P + + + K+ + S+ +AT+ Sbjct: 649 STATMIELTELGAGLAIDDFGTGYSSLSYLRYFPLTKLKIDKSFIERVTSDEHDAALATS 708 Query: 295 IIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLLA 348 +I L+ L++ V+A+GIE + Q ++++R +G S P+PA+ + L Sbjct: 709 VIALAHSLNLKVVAEGIEHEDQVQFLVKRSCHQGQGFLFSRPVPAEDMEQLLRQ 762 >UniRef50_C6NZ79 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6NZ79_9PROT Length = 923 Score = 517 bits (1334), Expect = e-145, Method: Composition-based stats. Identities = 61/356 (17%), Positives = 142/356 (39%), Gaps = 7/356 (1%) Query: 2 NTIKIKLNLIDYDSIVNIEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIKT-VSCQK 60 +L ++ ++ S + +LL L Y ++ SI + + Sbjct: 567 GDTVARLGGDEFIVLLREAGESAASVVAQKLLIALATPYDLDGQVISTQASIGISIYPDQ 626 Query: 61 MKLYKKLNVKSDLTLWRDVFLRFKAYLQPKNIICDNFNSS-VLPVVSSKGESMAHYNIYY 119 + L +D+ ++R + + + + + Y Sbjct: 627 AQDADTLIKNADMAMYRAKEEGRNNFQFFVPEMNFRVDLLFSMEKDLRLALERGELFLQY 686 Query: 120 QPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINKLFS---- 175 QP + +G ++G + I + + ++ I ++ + + + Sbjct: 687 QPQADLASGTLSGVEALIRWDHPVKGQVSP-AEFIPVAEETGQIVAIGEWVLRTACSQMA 745 Query: 176 PIKNNLPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRY 235 + H I +N++ + D+ + G + L L+ + + + Sbjct: 746 EWRKTGMHDLTIAVNLSIRQLRQPDLAELIKSVLLETGLDARHLELEITEGIMMGDNQAA 805 Query: 236 QSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTI 295 L +++ V LS++DFG G++ L++L+ +P + + + ++ DIE++ I +I Sbjct: 806 FRFLSEMQDLGVQLSIDDFGTGFSSLNYLKQMPVNKLKIDQSFIRDIETDEGDAAIIRSI 865 Query: 296 IDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLLASLK 351 I L +L++ VIA+G+ET++Q ++ RG ++G S PL A+ F+R + A + Sbjct: 866 ISLGHRLNLRVIAEGVETQEQLDFLRIRGCDEIQGYFYSRPLLAEDFMRFVKAPPR 921 >UniRef50_C6ME82 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Nitrosomonas sp. AL212 RepID=C6ME82_9PROT Length = 1136 Score = 517 bits (1333), Expect = e-145, Method: Composition-based stats. Identities = 58/358 (16%), Positives = 136/358 (37%), Gaps = 14/358 (3%) Query: 1 MNTIKIKLNLIDYDSIVNIEFPCLLSEIEIELLSQLLKGYSV-NEISKRRNRSIKT-VSC 58 + + + L D I+ + + L+ L +S+ + N SI + Sbjct: 770 LGGDEFLVVLED------IKDSNEPAMVAQTLIDLLATPFSLPSGHEIFINTSIGISLFP 823 Query: 59 QKMKLYKKLNVKSDLTLWRDVFLRFKAYLQ-PKNIICDNFNSSVLPVVSSKGESMAHYNI 117 +L +D+ ++ Y + VL + S + + Sbjct: 824 TDANSVTELIQHADMAMYLAKQEGRNTYRYHTDALSIAANERLVLETQLRQALSAGEFVL 883 Query: 118 YYQPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINKLFSPI 177 +YQP+ +A+ G + G + + + D + + I + L + + Sbjct: 884 HYQPLIDARKGQVMGVEALVRWQPPDKAMVSP-GKFIPIAEETGLIVPLGEWVLRTACAQ 942 Query: 178 KNNLP----HGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIR 233 + +N++ + ++ ++ L L+ + + Sbjct: 943 GRAWMDADFPPLVMAVNLSVRQFQSENLVELIRQVLEETKLPAACLELELTESMFMEHAE 1002 Query: 234 RYQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIAT 293 + L+ +++ V LS++DFG GY+ L++L+ P + + ++ H + + IA Sbjct: 1003 QSIEILKTLKSLGVRLSIDDFGTGYSSLTYLKRFPIDKLKIDQSFVHGLAYDPNDREIAA 1062 Query: 294 TIIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLLASLK 351 TII +++ L +DV+A+G+E+++Q + + G Y +G P+PA + + Sbjct: 1063 TIIAMARNLKLDVLAEGVESEQQLDILNQHGCDYYQGYLFHRPVPAQELEVWFRENKR 1120 >UniRef50_A8FYM5 Signal transduction protein containing a membrane domain an EAL and a GGDEF domain-like protein n=1 Tax=Shewanella sediminis HAW-EB3 RepID=A8FYM5_SHESH Length = 1055 Score = 517 bits (1333), Expect = e-145, Method: Composition-based stats. Identities = 61/353 (17%), Positives = 132/353 (37%), Gaps = 14/353 (3%) Query: 2 NTIKIKLNLIDYDSIVNIEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIKT-VSCQK 60 + + L N + + +LL+ + + + + SI V Sbjct: 700 GGDEFTVLLS------NTRTDNATTVVARKLLACFYEPFKLPSSEVVISASIGIGVFPDN 753 Query: 61 MKLYKKLNVKSDLTLWRDVFLRFK-AYLQPKNIICDNFNSSVLPVVSSKGESMAHYNIYY 119 L + +D ++R K + L + K + ++Y Sbjct: 754 GDSVDSLMMNADSAMYRAKEKGRNCFQFYTKEMNQYAQERLELELDLRKALERDEFVLHY 813 Query: 120 QPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINKLFSP--- 176 QP ++ NG I GC+ I ++ D + + IN + + + Sbjct: 814 QPQFD-PNGRIIGCEALIRWQHPDKGLLSP-GEFINMAEITGLIVPIGKWVIDTACMQHK 871 Query: 177 -IKNNLPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRY 235 + I++N++ L D+ + I G L L+ + + + Sbjct: 872 MWLSQGYPALNISVNLSGRQFLHHDLLETVKNAITTSGITPSCLELELTESIMMVNVEET 931 Query: 236 QSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTI 295 +L I + +++S++DFG GY+ +S L+ P + + + ++ + + I +I Sbjct: 932 IRTLNAISSLGIHMSIDDFGTGYSSMSCLKRFPVNKLKIDQSFVRGLPQDKEDVAIVKSI 991 Query: 296 IDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLLA 348 I ++ L++ VIA+G+ET +Q ++ + +G S P+ A + L A Sbjct: 992 IVMAHALNLTVIAEGVETLEQLEFLKSSRCEEFQGYYFSRPILAADIEQYLQA 1044 >UniRef50_C0INC4 GGDEF family protein n=1 Tax=uncultured bacterium BLR9 RepID=C0INC4_9BACT Length = 765 Score = 517 bits (1332), Expect = e-145, Method: Composition-based stats. Identities = 52/356 (14%), Positives = 131/356 (36%), Gaps = 13/356 (3%) Query: 2 NTIKIKLNLIDYDSIVNIEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIKT-VSCQK 60 + + L + + + + ++LS + + + + + SI Sbjct: 413 GGDEFVILLAE------VTTADDAAIVAKKILSAVALPHRIGRHELQISASIGISTCPND 466 Query: 61 MKLYKKLNVKSDLTLWRDVFLRFKAYLQPKN-IICDNFNSSVLPVVSSKGESMAHYNIYY 119 + L +D+ +++ Y + + L + ++Y Sbjct: 467 ADDAETLIKHADIAMYQAKEKGRNNYQFFRADMNERVLQRQSLESSLRLALERQEFLLHY 526 Query: 120 QPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHI----NKLFS 175 QP N + G+I G + I ++ + + I + + + + + Sbjct: 527 QPKMNLETGHITGMEALIRWRHPELGLV-PPASFIGVAEDCGLMQPIGRWVLQEACRQVK 585 Query: 176 PIKNNLPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRY 235 + + +N++ + + ++ + L L+ + + Sbjct: 586 EWMVAGLNPVPVAVNVSAVEFRRKHFFDGVISTLRETDLDPRYLELELTETVLMKEAEPT 645 Query: 236 QSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTI 295 + L +++ V L+++DFG GY+ LS+L +P + + ++ D+ + + I + I Sbjct: 646 IAVLHALKSAGVKLAIDDFGTGYSSLSYLTRLPVDTLKIDRSFVTDVTTRTDNAAIVSAI 705 Query: 296 IDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLLASLK 351 I + K L+++VIA+G+ET++Q + +G S P+ A L L+ Sbjct: 706 IGMGKSLNLNVIAEGVETQEQLALLRSHCCAEGQGYYFSRPVSVPAVAELLNTELR 761 >UniRef50_C6E011 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=2 Tax=Geobacter RepID=C6E011_GEOSM Length = 869 Score = 517 bits (1332), Expect = e-145, Method: Composition-based stats. Identities = 67/358 (18%), Positives = 134/358 (37%), Gaps = 13/358 (3%) Query: 1 MNTIKIKLNLIDYDSIVNIEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIKT-VSCQ 59 + + + L +S NI + ++ L +GY+V SI V Sbjct: 514 LGGDEFVVVLPLINS--NISAAHAV----RKIQQTLSQGYTVESHELNITPSIGISVYPT 567 Query: 60 KMKLYKKLNVKSDLTLWRDVFLRFKAYLQPKNIICDNFN-SSVLPVVSSKGESMAHYNIY 118 + ++L +DL ++ +Y + VL ++ Sbjct: 568 DGETVQELMKNADLAMYHAKSAGRNSYQFFTQEMNLTVQARLVLESDLRTALERDEMMLH 627 Query: 119 YQPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINKLFSP-- 176 YQP + K+G + G + + ++ A A D I + + + K Sbjct: 628 YQPQIDLKSGEVVGVEALLRWRHPVRGAVAPDV-FIPVAEDTGLILSIGEFALKSACEQL 686 Query: 177 --IKNNLPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRR 234 + + +N++ ++ + G L L+ + + Sbjct: 687 ALWISQGLSPLRMAVNLSARQFKQSNLPSLLADILAATGVAAHLLELEITESSAMDDPNT 746 Query: 235 YQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATT 294 LR +R V L+++DFG GY+ LS+L+ P + + + ++ I+++S IA Sbjct: 747 AIVHLRTLREMGVELAIDDFGTGYSSLSYLKLFPVNRLKIDRSFVRGIDTDSEDAEIAAA 806 Query: 295 IIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLLASLKQ 352 I L+ L +V+A+G+ET+ Q ++ + L+G S PL A L A+ + Sbjct: 807 TIALAHNLGKEVVAEGVETEAQCRFLRGQQCDILQGYFFSEPLSAAGIASYLAANRRP 864 >UniRef50_A1K5S9 GGDEF/EAL-domain containing protein n=1 Tax=Azoarcus sp. BH72 RepID=A1K5S9_AZOSB Length = 1090 Score = 515 bits (1329), Expect = e-145, Method: Composition-based stats. Identities = 55/348 (15%), Positives = 130/348 (37%), Gaps = 7/348 (2%) Query: 7 KLNLIDYDSIV-NIEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIKT-VSCQKMKLY 64 +L ++ +++ + + + ++L L +++ + SI + Sbjct: 740 RLGGDEFVALLPRVTRAEDAAAVARKMLDALATPVVIDDHELAPSVSIGISLFPSDGTDV 799 Query: 65 KKLNVKSDLTLWRDVFLRFKAYLQP-KNIICDNFNSSVLPVVSSKGESMAHYNIYYQPIY 123 L +D ++ + + + +L + ++YQP Sbjct: 800 DTLLKHADTAMYGAKEVGRNNFQFFVPEMNTRALERLLLENALRRAIERNELTLHYQPQV 859 Query: 124 NAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINKLFSPIKNNLPH 183 A + GC+ + ++ D + I + + L + + + Sbjct: 860 AATSDRPNGCEALVRWQHPDFGLV-PPAQFIPIAEDSGLIVPLGEWVLREACRQQVKWAR 918 Query: 184 ---GFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSLR 240 + +NI+ D + + G R+ L+ + + LR Sbjct: 919 SGLHLMVGVNISALQFRRADFVDSVVQVLAETGANPERIELEITESALMDASDALSRRLR 978 Query: 241 RIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSK 300 + N + L+L+DFG GY+ L++L+ +P + + ++ D+ + + + L++ Sbjct: 979 ELANMGLSLALDDFGTGYSSLAYLKRLPIGRLKIDRSFVKDLPGDPEDAAVTAATLSLAR 1038 Query: 301 QLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLLA 348 L ++V+A+G+ET Q +++ RG L+G S PL AF + A Sbjct: 1039 DLGLEVVAEGVETVAQRDFLVARGCHTLQGYLYSRPLDVAAFEAWMQA 1086 >UniRef50_Q5P4Q9 Putative uncharacterized protein n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5P4Q9_AZOSE Length = 813 Score = 515 bits (1328), Expect = e-145, Method: Composition-based stats. Identities = 57/359 (15%), Positives = 132/359 (36%), Gaps = 13/359 (3%) Query: 1 MNTIKIKLNLIDYDSIVNIEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIKT-VSCQ 59 + + + L ++ + +LL+QL Y V+ SI + Sbjct: 462 LGGDEFVVVLQGIGG------AHDVTHVAAKLLAQLSAPYCVDTTELHTTASIGISLFPD 515 Query: 60 KMKLYKKLNVKSDLTLWRDVFLRF-KAYLQPKNIICDNFNSSVLPVVSSKGESMAHYNIY 118 L +D ++ K + L + + ++ Sbjct: 516 DSADPAALMRNADTAMYHAKAAGRAKFQFYTDEMNRAATARLDLERKLRGAVARGEFELW 575 Query: 119 YQPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHI----NKLF 174 YQP +++++G++ G + + ++ A I + + + + Sbjct: 576 YQPQFDSRHGHLTGLEALVRWRHPQDGLIAP-LRFIPLAEETGVIVEIGTWVLREACRQA 634 Query: 175 SPIKNNLPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRR 234 + I++N++ + + + G L L+ + + Sbjct: 635 RQWLDAGLPELRISVNLSVRQLREKCLVDTVWTTLAASGLRPGLLELEITESAVMDNPDE 694 Query: 235 YQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATT 294 + L+ ++N V ++++DFG G++ LS+L+ P ++ + ++ DIE ++ +I Sbjct: 695 AVALLQALKNLGVRIAIDDFGTGHSSLSYLKLFPLDHLKIDRSFISDIEHDANDTMIVAA 754 Query: 295 IIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLLASLKQV 353 + L+ L + VIA+G+E+ Q + E G L+G S P+ AD L + + Sbjct: 755 AVSLAHNLGLSVIAEGVESAVQVARLRELGCDELQGFHFSRPVTADVVENLLRSVWRTA 813 >UniRef50_A0LH12 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LH12_SYNFM Length = 702 Score = 515 bits (1328), Expect = e-145, Method: Composition-based stats. Identities = 53/352 (15%), Positives = 117/352 (33%), Gaps = 13/352 (3%) Query: 1 MNTIKIKLNLIDYDSIVNIEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIKT-VSCQ 59 M + L + I + + LL L + + ++ SI V Sbjct: 351 MGGDDFVVLLTE------ISHVKGAANLAKRLLDDLSQPFVLDRHEVYVTASIGIAVHPH 404 Query: 60 KMKLYKKLNVKSDLTLWRDVFLRFK-AYLQPKNIICDNFNSSVLPVVSSKGESMAHYNIY 118 L +D + + S L + + Sbjct: 405 DGAEAGTLLKNADSAMHHAKAEGRNNFQFYTSSGKTAALRSLTLEGDLRMALARRELFVE 464 Query: 119 YQPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHI----NKLF 174 YQP + K G G + + + D I + + I Sbjct: 465 YQPEIDLKTGETVGLETLVRWDHPTLGLI-PPLDFIPLAEETGLILPIGEWILSIACMQN 523 Query: 175 SPIKNNLPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRR 234 + + + +N++ ++ + + + L L+ + + Sbjct: 524 AIWHKSGLEPIRVAVNLSGHQFRQRNLIKTIAKTLTNSRLDPQHLELEITESTLMENAAS 583 Query: 235 YQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATT 294 +++ +++ V L+++DFG GY+ LS+L+ P + + ++ D+ N+ I Sbjct: 584 TIHTVKELKSMGVRLAVDDFGTGYSSLSYLRRFPLDVLKIDRSFIRDVTINADDAAITRA 643 Query: 295 IIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKL 346 II ++ L+++VIA+G+E ++Q ++ E +G PL + L Sbjct: 644 IIAMAHNLNLEVIAEGVENEQQLQFLQENNCDMAQGYYYCRPLTPAKLTKHL 695 >UniRef50_A6T0F0 Sensory box/GGDEF family protein n=2 Tax=Oxalobacteraceae RepID=A6T0F0_JANMA Length = 699 Score = 515 bits (1328), Expect = e-145, Method: Composition-based stats. Identities = 64/353 (18%), Positives = 142/353 (40%), Gaps = 13/353 (3%) Query: 2 NTIKIKLNLIDYDSIVNIEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIK-TVSCQK 60 + L L D ++ +L ++ + + N++ + SI T+ Sbjct: 354 GGDEFVLLLTDQP------NEEAITHTMQRVLHEVSQPWKANDLEFQITCSIGLTLCPDD 407 Query: 61 MKLYKKLNVKSDLTLWRDVFLRFKAYLQPKNIICDNF-NSSVLPVVSSKGESMAHYNIYY 119 + + L +D +++ L + + + + L + + + ++Y Sbjct: 408 GRDAETLLKNADSAMYKAKELGRNNFQYFSAEMNSSVTDRLELLNRLRQAITNEDFVLHY 467 Query: 120 QPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINKLFSP--- 176 QP + + I G + + ++ + + I + L + + Sbjct: 468 QPKVSLASHQIIGAEALVRWNSAHSGMVSP-ASFIPLAEETGLIIPLGEWVLRTACRQNR 526 Query: 177 -IKNNLPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRY 235 ++ I++N++P + DI + G E L L+ + + + Sbjct: 527 AWQDAGYPPIPISVNLSPRQLARGDIVEVVERILTETGLEAQHLELEITESVMTTDVEKS 586 Query: 236 QSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTI 295 + L ++R+ V +SL+DFG GY+ LS+L+ P + + ++ DI ++ + I I Sbjct: 587 FALLTQLRSLGVKISLDDFGTGYSSLSYLKRFPVDTLKIDQSFVRDIATDQDSAAIVKAI 646 Query: 296 IDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLLA 348 I L + L++ V+A+GIET+ Q +++ G +G +S P+P FV L Sbjct: 647 ISLGRNLNLTVLAEGIETEDQFQFLLANGCDEGQGYLMSKPVPNKNFVDLLTQ 699 >UniRef50_C5CTK8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Variovorax paradoxus S110 RepID=C5CTK8_VARPS Length = 1107 Score = 515 bits (1327), Expect = e-144, Method: Composition-based stats. Identities = 61/356 (17%), Positives = 130/356 (36%), Gaps = 13/356 (3%) Query: 2 NTIKIKLNLIDYDSIVNIEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIK-TVSCQK 60 + L L N+ + + ++L+ + + + + S+ ++ Sbjct: 750 GGDEFVLLLE------NLSSANDAAGLAEKVLACCAEPFFLAGRELHVSASVGVSIYPDN 803 Query: 61 MKLYKKLNVKSDLTLWRDVFLRFKAYLQPKN-IICDNFNSSVLPVVSSKGESMAHYNIYY 119 + L +D ++R + + N +L ++Y Sbjct: 804 GADAEALLKNADTAMYRAKERGRNTFRFYAAKMNAQNTEQLMLESALRHALERGELEMHY 863 Query: 120 QPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINKLFSP--- 176 QP + + I G + + + I + L + Sbjct: 864 QPKMDLQTQRIVGVEALMRWHHPILGMI-PPVQFIPIAEELGLIVSLGKWALERACADSR 922 Query: 177 -IKNNLPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRY 235 + +++N++P + + + ++ G E L L+ + + Sbjct: 923 SWQKYGLPKVLMSVNLSPRQFESRTLIADIQAVLEASGLEPSLLELEITEGAVMANPEHA 982 Query: 236 QSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTI 295 LR IR+ V L+++DFG GY+ LS+L++ P S V + ++ +D+ ++ + I Sbjct: 983 AKLLRAIRDMGVGLAIDDFGTGYSSLSYLKHFPLSTVKIDRSFINDLSQDADARALIDGI 1042 Query: 296 IDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLLASLK 351 I L+ L + V+A+GIET Q Y+ G +G L P+PAD + L+ Sbjct: 1043 ITLAHGLRMKVVAEGIETTAQLDYLRSHGCDEAQGYWLCKPVPADEVRNFMARHLR 1098 >UniRef50_B8GMU1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GMU1_THISH Length = 862 Score = 515 bits (1327), Expect = e-144, Method: Composition-based stats. Identities = 63/351 (17%), Positives = 143/351 (40%), Gaps = 13/351 (3%) Query: 2 NTIKIKLNLIDYDSIVNIEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIKT-VSCQK 60 + + L NIE S ++ + + + + E N SI + + Sbjct: 518 GGDEFIILLE------NIEHSEQASLSAERVVQAMRRPFRLGEHEHFCNVSIGISLYPED 571 Query: 61 MKLYKKLNVKSDLTLWRDVFLRFKAY-LQPKNIICDNFNSSVLPVVSSKGESMAHYNIYY 119 + + L +D ++ Y ++ +L + + + ++Y Sbjct: 572 DEHPEDLVRHADSAMYLAKAQGGAGYRFYTPDMNTRAMERLLLQNQLHQALELGQFQVHY 631 Query: 120 QPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINKLFSP--- 176 QP + ++G I G + + ++ + ++ I + + L + + + Sbjct: 632 QPQMDLRSGRICGVEALVRWQHPERGLV-PPAEFIPMAEDTGLIEPLGEWVLRTAAREVR 690 Query: 177 -IKNNLPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRY 235 ++ +++N++P D+ + G E RL L+ + + + + Sbjct: 691 GWQDRGLPALNLSVNLSPRQFRHPDLPGMVERVLAESGLEAERLELEITERLIIVDLEHT 750 Query: 236 QSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTI 295 +L RI V +S++DFG G++ L++L+ +P + + + I +S IA + Sbjct: 751 VDTLSRIARLGVRVSIDDFGTGHSSLAYLKRLPVHALKIDREFVDGIGQDSDDAAIAEAV 810 Query: 296 IDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKL 346 I L + L + VIA+G+ET++QA ++ E G ++G ++ P+PA L Sbjct: 811 IALGRTLRLQVIAEGVETREQASFLREHGCDAVQGFFIARPMPAGELTGWL 861 >UniRef50_A1SZV0 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=1 Tax=Psychromonas ingrahamii 37 RepID=A1SZV0_PSYIN Length = 711 Score = 515 bits (1327), Expect = e-144, Method: Composition-based stats. Identities = 51/355 (14%), Positives = 127/355 (35%), Gaps = 13/355 (3%) Query: 1 MNTIKIKLNLIDYDSIVNIEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIKT-VSCQ 59 + + + L + I + E +L+ + +++ SI + Sbjct: 358 LGGDEFTVLLPEIGKIKDAEHA------ARRVLNSIGDIINLSGHDIVVTPSIGIAIFPH 411 Query: 60 KMKLYKKLNVKSDLTLWRDVFLRFKAYLQPKN-IICDNFNSSVLPVVSSKGESMAHYNIY 118 + L +D ++ Y N + L ++ Sbjct: 412 HGENVDSLLKNADAAMYYVKRAGKNDYELFVNSMNVVAKRRLELESFLRHAIDNKELSVN 471 Query: 119 YQPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINKLFSP-- 176 YQP + G I G + + +++ + + I +S + + + Sbjct: 472 YQPQIDIPTGRIIGAEALLRWNSAELGMVSP-VEFIPIAEETGLISPIGEWVLREACRQV 530 Query: 177 --IKNNLPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRR 234 +++ I +NI+ + +++ + G L L+ + + + Sbjct: 531 KEWRDDGLPEIQIAVNISVQQFAKQSLDKLVSKVLLETGLPVHCLELEITENMLMDDVEG 590 Query: 235 YQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATT 294 +L ++++ + L+++DFG GY+ LS+L+ P + + ++ + + + Sbjct: 591 AVETLHKLKDLGINLAIDDFGTGYSSLSYLKRFPIDKLKIDRSFITYVTTEPSDAAVTQA 650 Query: 295 IIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLLAS 349 II ++ L + VIA+G+E Q ++ + + ++G S PL A L + Sbjct: 651 IISMAHNLGLTVIAEGVEEASQLEFLRQHHCEEMQGYYFSRPLIASDMEALLRSH 705 >UniRef50_B8GNC0 Signal transduction protein containing a membrane domain an EAL and a GGDEF domain n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GNC0_THISH Length = 655 Score = 515 bits (1327), Expect = e-144, Method: Composition-based stats. Identities = 62/352 (17%), Positives = 144/352 (40%), Gaps = 14/352 (3%) Query: 2 NTIKIKLNLIDYDSIVNIEFPCLLSEIEIELLSQLLKGYSV-NEISKRRNRSIKT-VSCQ 59 + + + + ++ P LS + +L++L + Y + N SI + Q Sbjct: 299 GGDEFIVLVDE------VDDPQGLSLLAEGILAELAEPYRLSNGQEVFVGGSIGISLYPQ 352 Query: 60 KMKLYKKLNVKSDLTLWRDVFLRFKAYLQPKNIICDNFN-SSVLPVVSSKGESMAHYNIY 118 + ++L +K+D +++ Y + + N L + ++ Sbjct: 353 DGRSAEQLIMKADTAMYQAKDQGRSNYQFYTSALTLAANDRLALETSLRHALEREEFTLH 412 Query: 119 YQPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINKLFSPIK 178 YQP ++ + G + + + D A D+ I ++ L + + Sbjct: 413 YQPRVRTQDDVMIGMEALVRWHHPDKGLTAPDA-FIPMAEETGLITPLGLWVLRTACRQA 471 Query: 179 NNL----PHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRR 234 + +N++ + D+ + ++ G L L+ + + Sbjct: 472 QTWMRLYGEPIHMAVNLSMRQLRQPDLVSQIDAILRDTGLPASSLELELTESVLMAGDGH 531 Query: 235 YQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATT 294 ++L ++ V L+++DFG GY+ L++L+ +P + + ++ DI ++ IA+T Sbjct: 532 TLTALAELKALGVRLAIDDFGTGYSSLAYLKRLPIDALKIDRSFVSDIPHDASDMAIAST 591 Query: 295 IIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKL 346 II +++ L ++V+A+G+ET +Q ++ + G +G S P+ A A L Sbjct: 592 IIAMARTLGLEVVAEGVETPEQLAFLKKEGCDSYQGFGFSPPVDAQAMTLWL 643 >UniRef50_Q2BMA7 PAS:GGDEF protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BMA7_9GAMM Length = 932 Score = 515 bits (1327), Expect = e-144, Method: Composition-based stats. Identities = 64/358 (17%), Positives = 141/358 (39%), Gaps = 8/358 (2%) Query: 2 NTIKIKLNLIDYDSIVN-IEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIKT-VSCQ 59 N +L ++ ++N I ++ + ++ + SI + + Sbjct: 576 NDTVARLGGDEFVIVLNEIAGSTEINGVIEDIQQNFKPAVKLALQDMFVTPSIGVAIYPE 635 Query: 60 KMKLYKKLNVKSDLTLWRDVFLRFKAYLQPKNIICDNF-NSSVLPVVSSKGESMAHYNIY 118 + +L +D ++ + D+ L ++ + + +Y Sbjct: 636 DGETPVQLMKNADAAMYHAKASGRNCAQYFNRSLDDSLKERISLENALNQALKLGQFELY 695 Query: 119 YQPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINKLF---- 174 YQP + K+ I G + I + + + D+ I + + + Sbjct: 696 YQPQLDVKSNRIIGAEALIRWNHPEKGMISPDA-FIPLAEESGLIVDIGSWVLHQASSQL 754 Query: 175 SPIKNNLPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRR 234 + + +++N++ + RE I+ +G L L+ + + Sbjct: 755 AQWRKQGFDQLSVSVNLSALQVQKESFAREVADVIREYGVPEACLDLELTESMIMRNAEE 814 Query: 235 YQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATT 294 ++L +I N + +S++DFG GY+ LS+L+ P + + ++ DI ++ +I T Sbjct: 815 TIAALDKIHNLGIQISVDDFGTGYSSLSYLKRFPLDKLKIDRSFVQDITVDTDDAMICKT 874 Query: 295 IIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLLASLKQ 352 II ++ L++ VIA+G+ET Q + + G + +G + PLP + LLAS Q Sbjct: 875 IISMAHNLNLQVIAEGVETNAQLELLRDYGCEQYQGYLFAKPLPVEQMTEHLLASPCQ 932 >UniRef50_A7BQZ3 Sensory box/GGDEF family protein n=1 Tax=Beggiatoa sp. PS RepID=A7BQZ3_9GAMM Length = 576 Score = 514 bits (1326), Expect = e-144, Method: Composition-based stats. Identities = 60/357 (16%), Positives = 137/357 (38%), Gaps = 13/357 (3%) Query: 1 MNTIKIKLNLIDYDSIVNIEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIKT-VSCQ 59 ++ + + + + D++V +SE+ LL L + ++ SI V Sbjct: 220 LSGDEFVV-IEESDNLV-----KDVSEMAQGLLDNLSRSMVIDHHEMVVTASIGISVYPS 273 Query: 60 KMKLYKKLNVKSDLTLWRDVFLRFKAYLQPKN-IICDNFNSSVLPVVSSKGESMAHYNIY 118 + L +D + R Y K + F +L K S +Y Sbjct: 274 DGEEAAILLKNADTAMARAKAAGKNTYQFFKAEMNKAAFERLMLENQLRKVLSNNELILY 333 Query: 119 YQPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINKLFSP-- 176 YQP +G + G + + ++ + + + + + + + Sbjct: 334 YQPQIELSSGQLVGMEALLRWQHPEFGICSP-VKFVPVAEEMGLIVPIGEWVLRTACQQN 392 Query: 177 --IKNNLPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRR 234 + +++N++ ++ + + I L L+ + + Sbjct: 393 QTWQQLGFPPVRVSVNVSSRQFFRDNLLQIIKEALADSNLNPIYLELELTESVLMAEESG 452 Query: 235 YQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATT 294 L ++N V+++++DFG GY+ LS+L+ P + + ++ DI S+ I T Sbjct: 453 IFELLTEVQNMGVHIAIDDFGTGYSSLSYLKRFPLDVLKIDRSFVKDICSDGNDAAITTA 512 Query: 295 IIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLLASLK 351 II ++ L + V+A+G+ET+ Q ++ ++ ++G S P+ ++ + L K Sbjct: 513 IIAMAHSLGLSVVAEGVETQGQLTFLQQQHCDVIQGYYFSRPICSEKMTQTLQRISK 569 >UniRef50_A1TLA6 Diguanylate cyclase/phosphodiesterase n=2 Tax=Acidovorax RepID=A1TLA6_ACIAC Length = 1120 Score = 514 bits (1326), Expect = e-144, Method: Composition-based stats. Identities = 64/350 (18%), Positives = 134/350 (38%), Gaps = 10/350 (2%) Query: 2 NTIKIKLNLIDYDSIVNIEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIKTVSCQKM 61 + + L D+ + ++ +LL+QL + + + SI Sbjct: 753 GGDEFVVMLEGLDADTAL-AALQAEQVAEKLLAQLNRPFEMGAQQHYSTPSIGITLFGDQ 811 Query: 62 K-LYKKLNVKSDLTLWRDVFLRFKAYLQPK-NIICDNFNSSVLPVVSSKGESMAHYNIYY 119 + +L ++DL +++ ++ S L +G + ++ Sbjct: 812 RRTVDELLKRADLAMYQAKAAGRNTQRFFDPDMQAQVTARSQLESDLRQGIARHELTVHL 871 Query: 120 QPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINKLFSPIKN 179 QPI + + G + + ++ + +D I + L + + Sbjct: 872 QPIVDGST-RLCGAEALVRWRHPVKGLISP-ADFIPLAEETGLILPLGRQVLQTACEQLV 929 Query: 180 NLPHG-----FFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRR 234 F I +N++ D E L + G RL L+ + L + Sbjct: 930 RWATHPATASFTIAVNVSARQFRQPDFVAEVLGTLAGTGANPQRLKLELTESLLLGDVED 989 Query: 235 YQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATT 294 + +++ V +L+DFG GY+ LS+L+ +P V + ++ D+ ++ I T Sbjct: 990 TICRMAQLKRVGVGFALDDFGTGYSSLSYLKRLPLDLVKIDQSFVRDVLTDPNDAAIVRT 1049 Query: 295 IIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVR 344 I+ L+K L + V+A+G+ET Q ++ G + +G P+P +AF R Sbjct: 1050 ILALAKSLDLQVVAEGVETAGQLSFLKLHGCEGFQGYLFGRPVPLEAFER 1099 >UniRef50_C6WVK9 Diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(S) n=1 Tax=Methylotenera mobilis JLW8 RepID=C6WVK9_METML Length = 1329 Score = 514 bits (1325), Expect = e-144, Method: Composition-based stats. Identities = 59/351 (16%), Positives = 134/351 (38%), Gaps = 14/351 (3%) Query: 2 NTIKIKLNLIDYDSIVNIEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIKT-VSCQK 60 + L L + + + +LL + + ++ + SI Q Sbjct: 984 GGDEFILLLPN-------TDAEGAAHVAKKLLDIVAQPFNFHGQKIVLTASIGISAYPQD 1036 Query: 61 MKLYKKLNVKSDLTLWRDVFLRFKAYLQP-KNIICDNFNSSVLPVVSSKGESMAHYNIYY 119 + +++L +D L+R + + + + + +L + +YY Sbjct: 1037 GESFEQLAQSADAALYRAKYEGRNNFQFFARQMHEQAHDILLLESELRSAIEHEEFLLYY 1096 Query: 120 QPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINK----LFS 175 QP Y++K I G + I ++ + + + I ++ + + + + Sbjct: 1097 QPQYDSKTSKIIGLEALIRWQHPEKGLVSP-AVFIPIAEESGLIAEIGDWVLRTAVKQLA 1155 Query: 176 PIKNNLPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRY 235 + + +N++ + ++ + L L+ + + R Sbjct: 1156 SWQEAGLGAVPVAVNLSVVQFHQDTLYGSVCQILRDTKVDPSMLELELTEGIAMEDSERT 1215 Query: 236 QSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTI 295 + L ++ + V LS++DFG GY+ LS+L+ + + ++ I S+ I T I Sbjct: 1216 LNVLNQLNSLGVRLSIDDFGTGYSSLSYLKKFKIDKLKIDQSFVRGIGSHPQDAAIITAI 1275 Query: 296 IDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKL 346 I ++K L IA+G+ET +Q ++I ++G S PLP+ + L Sbjct: 1276 ISMAKSLSFKTIAEGVETLEQLNFLIANSCDEIQGYYFSKPLPSTEVTKLL 1326 >UniRef50_C4L9X9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Tolumonas auensis DSM 9187 RepID=C4L9X9_TOLAT Length = 1101 Score = 514 bits (1325), Expect = e-144, Method: Composition-based stats. Identities = 62/356 (17%), Positives = 137/356 (38%), Gaps = 14/356 (3%) Query: 1 MNTIKIKLNLIDYDSIVNIEFPCLLSEIEIELLSQLLKGYSV-NEISKRRNRSIKT-VSC 58 + + + + ++ + ++L L +S+ N SI + Sbjct: 747 LGGDEFTVLIEGNPAL------HDVEHFAEDILQLLKDPFSLPNGREVIIGASIGISLYP 800 Query: 59 QKMKLYKKLNVKSDLTLWRDVFLRFKAYLQPKNIICDNFN-SSVLPVVSSKGESMAHYNI 117 + + K+L ++D ++R + + + L V + + + Sbjct: 801 EHGQTPKELLQQADAAMYRAKAHGRSCFRYFSDELTRAAEQRLDLEVRLQRALRLNELCL 860 Query: 118 YYQPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHI----NKL 173 Y+QP + + I G + + ++ + + I + L + + Sbjct: 861 YFQPQIDISSNRIIGAEALVRWQDPAHGLISP-AQFIPVAEETGLIKQLGEWVLLEACRQ 919 Query: 174 FSPIKNNLPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIR 233 + + +NI+P +I + +K G L L+ + + Sbjct: 920 GKEWQQKGLPAINLAVNISPVQFRNSNILESVFNALKQTGYPASLLELELTESALMTHEN 979 Query: 234 RYQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIAT 293 L +R + L+++DFG GY+ L++L+ P + + K+ DI IA Sbjct: 980 EAVEILSALRKYGIRLAIDDFGTGYSSLAYLKRFPLDVLKIDKSFVDDIPHKKDDMEIAA 1039 Query: 294 TIIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLLAS 349 I+ ++ L + V+A+G+ET++Q ++ E+G +G +S P+PAD F + L A Sbjct: 1040 AIVAMAHTLRLKVLAEGVETEEQLTFLKEQGCDCYQGYLMSPPVPADQFEQLLRAQ 1095 >UniRef50_A0LKD9 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LKD9_SYNFM Length = 844 Score = 513 bits (1324), Expect = e-144, Method: Composition-based stats. Identities = 62/351 (17%), Positives = 127/351 (36%), Gaps = 13/351 (3%) Query: 2 NTIKIKLNLIDYDSIVNIEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIKT-VSCQK 60 + + L +I + +L L + +SV + SI V + Sbjct: 487 GGDEFIILLE------SIRGAEDAAVAARRILDVLAEPFSVQGHEVFVSGSIGISVYPRD 540 Query: 61 MKLYKKLNVKSDLTLWRDVFLRFKAYL-QPKNIICDNFNSSVLPVVSSKGESMAHYNIYY 119 + + L +D+ ++R Y + L + ++Y Sbjct: 541 GEDVQALLRCADIAMYRAKDSGKNDYQFYESTMSTGGLERLKLEGDLRYALKRNEFVLHY 600 Query: 120 QPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINKLFS---- 175 QP N G I G + I D D I + + + + Sbjct: 601 QPRVNINTGLIVGAEALIRWDLPDRGLLWP-LDFIPLAEESGFIIPIGEWVLRTACLQCR 659 Query: 176 PIKNNLPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRY 235 ++ +++N++ ++ +K G L L+ + + + + Sbjct: 660 KWQDAGVPHPRVSVNLSTHQFKKDNLTSTVDRILKETGLSPGLLELEITESAMMENLEKA 719 Query: 236 QSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTI 295 ++L+ + V ++++DFG GY+ L +L+ P + + ++ I SN IA +I Sbjct: 720 VATLQGLAELGVNVAIDDFGTGYSSLGYLKRFPIGALKIDQSFVRHIPSNIDDTAIAMSI 779 Query: 296 IDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKL 346 I L K L++ V+A+G+ET++Q + +G S P+ AD L Sbjct: 780 ISLGKTLNLKVVAEGVETQEQLTVLRNYQCDEAQGYLFSQPVDADRMTEFL 830 >UniRef50_Q1H2G8 Diguanylate cyclase/phosphodiesterase n=1 Tax=Methylobacillus flagellatus KT RepID=Q1H2G8_METFK Length = 633 Score = 513 bits (1323), Expect = e-144, Method: Composition-based stats. Identities = 49/350 (14%), Positives = 131/350 (37%), Gaps = 7/350 (2%) Query: 6 IKLNLIDYDSIVNI-EFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIK-TVSCQKMKL 63 ++ ++ +++ + + + L +N+ + SI ++ + Sbjct: 273 YRVGGDEFAMMLDQPADVENVEAVANRFIRALAPPIVLNDRNFYIGVSIGASIYPYDGED 332 Query: 64 YKKLNVKSDLTLWRDVFLRFK-AYLQPKNIICDNFNSSVLPVVSSKGESMAHYNIYYQPI 122 L +D ++ + + + +L + +YYQP Sbjct: 333 AAHLLRDADAAMYYAKSRGKNNFQMFSAEMHHKSSTRLLLETELRVALEEKQFELYYQPQ 392 Query: 123 YNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINKLFSPIKNNLP 182 ++ + + G + I + S I + + + + Sbjct: 393 FSLPDCKLVGVEALIRWHHPQRGLLCPSS-FIPVAEETGLIVRIGEWVLREACRQAMEWK 451 Query: 183 H---GFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSL 239 +++N++ ++ + I+ G + L L+ + + + L Sbjct: 452 ALGVPLRMSVNLSGRQFRQENLVQTMTKIIERTGMDSSLLELEITETVLMEDAEATTTRL 511 Query: 240 RRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLS 299 ++ ++L+++DFG GY+ +++L+ P S + + ++ DI ++ I T I ++ Sbjct: 512 ADLKAMGMHLAIDDFGTGYSSMAYLKRFPVSRLKIDRSFIRDIPNDPDDVAITTATIQMA 571 Query: 300 KQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLLAS 349 L ++V+A+G+ETK Q ++ E+G ++G S P+ A ++ Sbjct: 572 HSLKLEVVAEGVETKAQLQFLREQGSDMVQGYLFSRPVSAREMAELVITG 621 >UniRef50_Q0AIX2 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=6 Tax=Proteobacteria RepID=Q0AIX2_NITEC Length = 791 Score = 513 bits (1323), Expect = e-144, Method: Composition-based stats. Identities = 55/356 (15%), Positives = 135/356 (37%), Gaps = 14/356 (3%) Query: 1 MNTIKIKLNLIDYDSIVNIEFPCLLSEIEIELLSQLLKGYSV-NEISKRRNRSIKT-VSC 58 + + L L D + ++ P + L++ L + + + N SI + Sbjct: 438 LGGDEFLLVLED---VRDLGDPAF---VAQSLINLLTSPFVLPSGHEIFINASIGISLFP 491 Query: 59 QKMKLYKKLNVKSDLTLWRDVFLRFKAYLQ-PKNIICDNFNSSVLPVVSSKGESMAHYNI 117 + +L SD+ +++ Y + + ++ S + Sbjct: 492 EDASNATELIQHSDMAMYQAKKEGRNTYRYHTEALSVAANERLIMENRLRYALSAEELIL 551 Query: 118 YYQPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINKLFSPI 177 +YQP+ +A+ G + G + + + + I + L + + Sbjct: 552 HYQPLVDARTGYVVGVEALVRWQPPGKAMV-PPGKFIPIAEETGLIVPLGEWVLRTACKQ 610 Query: 178 KNNLPH----GFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIR 233 + +N++ + ++ ++ L L+ + + + Sbjct: 611 ARAWIDAGLSPLVMAVNLSVRQFQSENLVGMVQRILEETQLPADYLELELTESMFMEHVE 670 Query: 234 RYQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIAT 293 + +L +++ V+L+++DFG GY+ L +L+ P + + + D+ + IA Sbjct: 671 QSIETLNKLKTLGVHLAIDDFGTGYSSLIYLKRFPIDKLKIDQRFVRDLADDHNDREIAA 730 Query: 294 TIIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLLAS 349 TII +++ L + V+A+GIE+++Q ++ ++ Y +G P+PA L Sbjct: 731 TIIAMARGLKLGVLAEGIESEEQLAFLRQQDCDYYQGYLFHRPVPAIELEAWLREH 786 >UniRef50_Q74BV5 Sensory box/response regulator n=1 Tax=Geobacter sulfurreducens RepID=Q74BV5_GEOSL Length = 660 Score = 513 bits (1323), Expect = e-144, Method: Composition-based stats. Identities = 59/358 (16%), Positives = 126/358 (35%), Gaps = 15/358 (4%) Query: 1 MNTIKIKLNLIDYDSIVNIEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIKT-VSCQ 59 M + + L D + P + + +++ L K Y + SI + Sbjct: 311 MGGDEFTILLTD------LAHPQDAARVSQRIITALSKRYVIGGHEVFVGASIGISLFPS 364 Query: 60 KMKLYKKLNVKSDLTLWRDVFLRFKAYLQPK-NIICDNFNSSVLPVVSSKGESMAHYNIY 118 + +L +D ++ L Y ++ L + + Sbjct: 365 DGEDCDQLLRNADTAMYHAKELGRNTYQYYSGSMNAMALERLTLENNLRWALKRNEFRLC 424 Query: 119 YQPIYNAKNGNIAGCDVTIALKNSDGSA-FALDSDRINYNPNDNKVSYLFGHI----NKL 173 YQP +A +G + G + ++ D I ++ + + Sbjct: 425 YQPQLDAASGRVVGMEALLSWHRP--GCDVVPPDDFIPLAEETGLIASIGEWVLWNACAQ 482 Query: 174 FSPIKNNLPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIR 233 + + +N++ + + ++ G L L+ + + Sbjct: 483 AVTWLHEGLPPVRVAVNLSSLQFRSRRLAELVRKVLRATGLPPSHLELEITEGVFMSNEE 542 Query: 234 RYQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIAT 293 +R ++ V S++DFG GY+ LS L P + + ++ DI ++ + Sbjct: 543 DAAVVIRDLKKMGVRFSVDDFGTGYSSLSRLSRFPLDALKIDRSFVRDISADPAAAGLTA 602 Query: 294 TIIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLLASLK 351 II +++ L ++VIA+G+ET +Q ++ G ++G S PL DA L A + Sbjct: 603 AIIAMARNLGLNVIAEGVETHEQFAFLRANGCAEVQGFLFSQPLNPDAAAAFLRARSR 660 >UniRef50_Q5P4K8 Putative sensory box/GGDEF family protein n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5P4K8_AZOSE Length = 698 Score = 513 bits (1322), Expect = e-144, Method: Composition-based stats. Identities = 51/348 (14%), Positives = 131/348 (37%), Gaps = 13/348 (3%) Query: 1 MNTIKIKLNLIDYDSIVNIEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIKT-VSCQ 59 + + + L D SI + + +L +L + + + + SI ++ + Sbjct: 347 LGGDEFVVLLEDLASI------EDAARLAAKLRDRLSESVRIGSLELPLSASIGVALAPR 400 Query: 60 KMKLYKKLNVKSDLTLWRDVFLRFKAY-LQPKNIICDNFNSSVLPVVSSKGESMAHYNIY 118 + + L +D+ ++R Y + + + + + Sbjct: 401 DGRDPEMLLKNADIAMYRAKERGRNNYCFYGPEMDHHARRRLTVESELRRALAGGELEAH 460 Query: 119 YQPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINKLFSP-- 176 YQP + G + G + + ++ + + I + L + + Sbjct: 461 YQPQVDLATGALTGAEALVRWRHPERCLLLP-GEFIAVAEETGLIVPLGEQVLRAACRQS 519 Query: 177 --IKNNLPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRR 234 + + +N++ D+ + + G +L L+ + + Sbjct: 520 TRWREAGRPDLKVAVNLSGHQFRQHDLVEQVCDILAETGAHAAQLELEITESVAMADADG 579 Query: 235 YQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATT 294 ++L +R + L+++DFG GY+ LS+L+ P + + ++ I ++ I Sbjct: 580 SVATLAGLRRQGIALAIDDFGTGYSSLSYLKRFPIDTLKIDRSFIQGIPADGDDTAIVQA 639 Query: 295 IIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAF 342 II +++ L + ++A+G+ET Q +++ +G + +G +PA+ F Sbjct: 640 IIAMARSLRLSLLAEGVETPAQREFLVAQGCRSGQGFLFGRAMPAEDF 687 >UniRef50_C4K931 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Thauera sp. MZ1T RepID=C4K931_THASP Length = 855 Score = 513 bits (1322), Expect = e-144, Method: Composition-based stats. Identities = 57/350 (16%), Positives = 126/350 (36%), Gaps = 13/350 (3%) Query: 1 MNTIKIKLNLIDYDSIVNIEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIKT-VSCQ 59 M + + L N+ P + + ++++L + +V S+ V Sbjct: 507 MGGDEFLVVLN------NLSGPDEAATMARRMVAELRRPVNVEGRELVVTTSVGVAVYPD 560 Query: 60 KMKLYKKLNVKSDLTLWRDVFLRFK-AYLQPKNIICDNFNSSVLPVVSSKGESMAHYNIY 118 + L +D+ ++R L + + L + +Y Sbjct: 561 DSRDADTLVKHADVAMYRAKDEGRNSFQLFEPAMNARSLERLALETALHRALPRDELQLY 620 Query: 119 YQPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINKLFS--- 175 +QP+ A+ G + + + ++ D + +D I + + + + + Sbjct: 621 FQPVMKAEGGELVAVEALLRWRHPDLGLVSP-ADFIPLAEDTGLIVPIGEWVLRSACEHH 679 Query: 176 -PIKNNLPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRR 234 + +NI+ + G L L+ + + R Sbjct: 680 RRWCEAGGAPLHMMVNISARQFREEGFAAMVGSVLAETGMTPGDLTLELTESMLMDDTDR 739 Query: 235 YQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATT 294 + L +R V L+++DFG GY+ L++L+ P + + + I+ N+ + + Sbjct: 740 ALARLDHLRALGVCLAIDDFGTGYSSLAYLKRFPIDELKIDRLFVRGIDRNTRDAALVSA 799 Query: 295 IIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVR 344 I+ L L + V+A+G+ET + +G +G S PLP + FV+ Sbjct: 800 IVSLGHSLGLRVVAEGVETAAHLDVLRRQGCDLAQGFHFSPPLPWEEFVK 849 >UniRef50_C0ZBG1 Probable signaling protein YkoW n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZBG1_BREBN Length = 805 Score = 512 bits (1321), Expect = e-144, Method: Composition-based stats. Identities = 58/353 (16%), Positives = 140/353 (39%), Gaps = 8/353 (2%) Query: 3 TIKIKLNLIDYDSIVNIEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIKTV-SCQKM 61 +L ++ I+ +S + E+ + + + ++ SI + Sbjct: 451 GTVYRLGGDEFMVILTDVTEREVSSMANEINETIEQAFFIHGHELYITTSIGISRYPEDG 510 Query: 62 KLYKKLNVKSDLTLWRDVFLRFK-AYLQPKNIICDNFNSSVLPVVSSKGESMAHYNIYYQ 120 + L +D ++ +L N+ + + ++ + + ++YQ Sbjct: 511 QDRSVLMRNADAAMYAAKDKGKNSFHLYVPNLEQAVNDKMNIQNELNRALARQEFLLHYQ 570 Query: 121 PIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINKLFS----P 176 P +AK+G I G + I + + D I+ + + + + Sbjct: 571 PQVSAKSGAIVGVEALIRWDHPERGLLLPD-QFISVAEETGLIVPIGEWVLRTACKQNKQ 629 Query: 177 IKNNLPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQ 236 ++ + +N++ L D + + L L+ + + + R Sbjct: 630 WQDQGLKPLRVAVNLSARQFLKQDFTQMIAEILHQTRLAPEYLELEITESS-MIDVHRAT 688 Query: 237 SSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTII 296 +L+ ++ V+++++DFG GY+ L +L+ P + + + ++ D+ I +TII Sbjct: 689 QALKELKQLGVHVAIDDFGTGYSSLYYLKEFPLNRLKIDRSFVRDMIEQPSNQAIVSTII 748 Query: 297 DLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLLAS 349 ++ L + VIA+G+ETK++ ++ E + ++G S PLP++ L A Sbjct: 749 SMAHHLQMHVIAEGVETKEELAFLQEHLCEEVQGYLFSRPLPSEDVAFYLQAQ 801 >UniRef50_B5E7Y8 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=4 Tax=Geobacter RepID=B5E7Y8_GEOBB Length = 704 Score = 512 bits (1319), Expect = e-143, Method: Composition-based stats. Identities = 60/352 (17%), Positives = 135/352 (38%), Gaps = 13/352 (3%) Query: 1 MNTIKIKLNLIDYDSIVNIEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIKT-VSCQ 59 + + + L D IE +++I +L + YS+ + SI + Sbjct: 356 LGGDEFTIMLSD------IEHFQDVAKIARRILEAVSVPYSLEGQEVFVSTSIGISLYPF 409 Query: 60 KMKLYKKLNVKSDLTLWRDVFLRFKAYL-QPKNIICDNFNSSVLPVVSSKGESMAHYNIY 118 L +D +++ Y +++ +L K + +Y Sbjct: 410 DATTASDLIRNADGAMYQAKEQGRNGYQIYDESMNAKALERIILESQLHKALKEEEFIVY 469 Query: 119 YQPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINKLFSP-- 176 YQP + ++G + G + + + + + V + + + Sbjct: 470 YQPQVSNQSGRVVGIEALVRWNSKELGLVEP-GRFLPLAEEIGLVIQIDQWVMREACRQH 528 Query: 177 --IKNNLPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRR 234 + + INI+ + + ++ +K G + L L+ + + R Sbjct: 529 KLWLDAGFPPVTLAINISGQQFMKNELLETVTSVLKESGLDPGLLELELTEGVLMAHTER 588 Query: 235 YQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATT 294 +L+ ++ V L+++DFG G++ LS+L+ P + + +T +DI ++ I Sbjct: 589 TVKTLQALKGMGVRLAIDDFGTGFSSLSYLKRFPLDVLKIDRTFINDITTDPDDAAITLA 648 Query: 295 IIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKL 346 I+++ + + VIA+G+ETK Q ++ + G +G S P+P+ R Sbjct: 649 TIEMAHTMKLKVIAEGVETKPQLDFLTKNGCDMYQGYLFSKPVPSTELPRLF 700 >UniRef50_Q5P713 Predicted phospholipase A2 n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5P713_AZOSE Length = 1043 Score = 512 bits (1319), Expect = e-143, Method: Composition-based stats. Identities = 49/354 (13%), Positives = 129/354 (36%), Gaps = 8/354 (2%) Query: 7 KLNLIDYDSIVNIEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIKTV-SCQKMKLYK 65 +L ++ ++ + + +L+ + + SI + ++ Sbjct: 688 RLGGDEFLILLPHAQVECAAHVAEKLIVAAADPMLIEDHEMLVTPSIGIAMYPADGEDFE 747 Query: 66 KLNVKSDLTLWRDVFLRFKAYLQPK-NIICDNFNSSVLPVVSSKGESMAHYNIYYQPIYN 124 L ++D R Y + + ++ L + ++YQP + Sbjct: 748 TLLQRADTATNRAKSDGRNTYRFFAPEMQLRSAHTLRLETALRRALERNELVLHYQPQID 807 Query: 125 AKN-GNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINK----LFSPIKN 179 + G +AG + I ++ + + ++ I + + + + + + Sbjct: 808 LVDFGRVAGVEALIRWQHPEFGLVSP-AEFIPIAESTGLILPIGEWVMQTALLQLKAWQL 866 Query: 180 NLPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSL 239 + +N++ ++ + G L L+ + + + + Sbjct: 867 AGLQLGQVGVNLSAHQFRQQNLPATVARILAEAGLPASCLELELTESAMMDDPVAAVAMM 926 Query: 240 RRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLS 299 + + V +S++DFG GY+ L++L+ + + ++ D+ + + I I+ L+ Sbjct: 927 DALHRDGVRMSIDDFGTGYSSLNYLKRFRIDKLKIDQSFVRDLTQDPEGEAIVEAIVSLA 986 Query: 300 KQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLLASLKQV 353 + L IA+G+E +Q ++ G + ++G S PLP D L A ++ Sbjct: 987 RTLRFRTIAEGVEKPEQLAFLRASGCQEVQGYLFSRPLPPDELAVWLRAWRPEL 1040 >UniRef50_C7RNA9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RNA9_9PROT Length = 1399 Score = 511 bits (1318), Expect = e-143, Method: Composition-based stats. Identities = 55/353 (15%), Positives = 122/353 (34%), Gaps = 9/353 (2%) Query: 2 NTIKIKLNLIDYDSIVNIEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIKT-VSCQK 60 + + +L ++ ++ + ++L L + Y + + SI V Sbjct: 1045 SDVVARLGGDEFVVVLTGADALAAERVAGKILKALSRAYQIEGHALHSTSSIGIAVFPAD 1104 Query: 61 MKLYKKLNVKSDLTLWRDVFLRFKAYLQPKN-IICDNFNSSVLPVVSSKGESMAHYNIYY 119 + + L +D ++ + + L + ++Y Sbjct: 1105 GESVEVLMQNADAAMYHAKSAGRNNVQFFTASMNEAASDRRQLEEDLHLALQQKQFVLHY 1164 Query: 120 QPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINKLFSPIKN 179 QP +A+ + + + ++ + + + + + + + Sbjct: 1165 QPQVDAQ-RRVFAVEALLRWQHPHHGLV-PPARFVPLAEDTGLIVPIGQWVLETACAQIK 1222 Query: 180 NLPHG-----FFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRR 234 + +N++ D I G RL L+ + L + Sbjct: 1223 AWSVDARTRKLQVAVNVSARQFRQPDFVELLRQAIDNSGANPARLKLELTESLVLDNVAD 1282 Query: 235 YQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATT 294 + I+ V S++DFG GY+ LS+L +P + + + + N +IA T Sbjct: 1283 TIDKMNAIKLLGVTFSMDDFGTGYSSLSYLTRLPLDQLKIDRAFVCRLPENRSDAVIAQT 1342 Query: 295 IIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLL 347 I+ + + L + V+A+G+ET+ Q ++ G +G S PL DAF L Sbjct: 1343 IVTMGRSLGLKVVAEGVETEAQRQFLDSHGCDGYQGFLFSRPLAVDAFEDFLQ 1395 >UniRef50_C6MBX5 Diguanylate cyclase/phosphodiesterase n=1 Tax=Nitrosomonas sp. AL212 RepID=C6MBX5_9PROT Length = 891 Score = 511 bits (1318), Expect = e-143, Method: Composition-based stats. Identities = 56/358 (15%), Positives = 140/358 (39%), Gaps = 8/358 (2%) Query: 2 NTIKIKLNLIDYDSIVN-IEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIKT-VSCQ 59 + ++ ++N I +++ ++L + +++ + SI V Sbjct: 524 EDTVARQGGDEFIVVLNSIAESLDAAKVAQKILDSFALPFHIHKNELHIDGSIGIAVFPD 583 Query: 60 KMKLYKKLNVKSDLTLWRDVFLRFKAYLQP-KNIICDNFNSSVLPVVSSKGESMAHYNIY 118 + L SD+ ++ Y + + +L + +Y Sbjct: 584 DGVNAETLLKNSDVAMYHAKKNGRNNYQFFTDELNKSAYERHILGLDLRYALERNELLLY 643 Query: 119 YQPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINKLFS--- 175 YQP+ + + N+ G + + ++ + D IN + + + + Sbjct: 644 YQPVMDMPSHNLYGVEALLRWRHPEQKLITPD-KFINLAEETGLIIPIGEWVIRTVCLQI 702 Query: 176 -PIKNNLPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRR 234 + + + IN++ D+ + + G + + L+ + + I + Sbjct: 703 KAWQEQGFYVPRVAINLSARQFRDKDLIKNISRILSETGVKAKHIALEITESMLIDNIEK 762 Query: 235 YQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATT 294 +L R+ +++S++DFG GY+ LS+L+ P + + ++ D+ ++ I Sbjct: 763 VVETLNRLDAMGLHISIDDFGTGYSSLSYLKQFPIHTLKIDRSFVRDLVTDKNDRTIVAA 822 Query: 295 IIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLLASLKQ 352 II ++ L ++VIA+GIE ++Q +++ + + +G S P+ L+ S+ Q Sbjct: 823 IIAMAHSLEMEVIAEGIEIEEQLDFLVTQKCNHYQGYYFSKPVTVSEIELMLMNSVTQ 880 >UniRef50_A1K3A1 GGEF/EAL/PAS/PAC-domain containing protein n=1 Tax=Azoarcus sp. BH72 RepID=A1K3A1_AZOSB Length = 818 Score = 511 bits (1318), Expect = e-143, Method: Composition-based stats. Identities = 54/348 (15%), Positives = 123/348 (35%), Gaps = 13/348 (3%) Query: 1 MNTIKIKLNLIDYDSIVNIEFPCLLSEIEIELLSQLLKGYSV-NEISKRRNRSIKT-VSC 58 + + + L I +++ E++ L + + + + SI + Sbjct: 469 LGGDEFVILLD------RIRSANDVADFAQEIIDLLNQSFQLASGQEVFVGASIGISLYP 522 Query: 59 QKMKLYKKLNVKSDLTLWRDVFLRFKAYLQPKN-IICDNFNSSVLPVVSSKGESMAHYNI 117 +L +D L++ Y + L +G + + Sbjct: 523 LDTDDATQLISNADAALYQAKEAGRNVYRFYTADLTRAAHERLGLEAALRRGLERGEFVL 582 Query: 118 YYQPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINKLFSPI 177 ++QP+ G + G + + + A I + L + + Sbjct: 583 HFQPVVALDKGEVVGAEALVRWNHPTEGMIAP-LRFIPLAEETGLIVPLGEWVLESACRQ 641 Query: 178 KNNLPH---GFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRR 234 I +N++ D+ + G L L+ + + R Sbjct: 642 GREWLDCGRPLTIAVNLSTRQFRAGDLTATVRDILDRTGFPAALLELEITESTVMEDADR 701 Query: 235 YQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATT 294 ++L ++ V LS++DFG GY+ L++L+ + + ++ DI + +I T Sbjct: 702 AVATLAALKGLGVRLSIDDFGTGYSSLAYLKRFAVDALKIDRSFVRDIADDENDRMIVAT 761 Query: 295 IIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAF 342 ++ ++ Q+ + VIA+G+ET +Q ++ G + +G + P A F Sbjct: 762 VVAMAHQMRLGVIAEGVETAEQLAFLRSLGCEAYQGYLVGRPQAAADF 809 >UniRef50_Q7NZ89 Putative uncharacterized protein n=1 Tax=Chromobacterium violaceum RepID=Q7NZ89_CHRVO Length = 936 Score = 511 bits (1317), Expect = e-143, Method: Composition-based stats. Identities = 57/351 (16%), Positives = 129/351 (36%), Gaps = 13/351 (3%) Query: 2 NTIKIKLNLIDYDSIVNIEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIKT-VSCQK 60 + + L I P + + ++ SI V Sbjct: 584 GGDEFIILLPV------ISDPGEAALAAERVRDVFANPIELHNHVLTITPSIGISVYPDD 637 Query: 61 MKLYKKLNVKSDLTLWRDVFLRFKAY-LQPKNIICDNFNSSVLPVVSSKGESMAHYNIYY 119 + Y+ L +D ++ +Y ++ + + ++Y Sbjct: 638 GRDYETLVRNADAAMYHAKSSGRNSYKFYTADLNARAREILAIESQLRFALERDEFVLHY 697 Query: 120 QPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHIN----KLFS 175 QP ++G I G + I + I + + + + Sbjct: 698 QPQVEMESGRIVGAEALIRWNHPSLGLLGP-VRFIQVAEERGFIVQIGNWVIAEATRQLV 756 Query: 176 PIKNNLPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRY 235 + + IN++ D+ + ++ G L ++ + + + Sbjct: 757 EWRRAGLPELTLAINLSALQFRQPDLALQVKQALESSGLPGHALDIEVTESIIMEDAQAT 816 Query: 236 QSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTI 295 ++ ++N + LS++DFG GY+ LS+L+ + + ++ DI ++ IA I Sbjct: 817 IQTIDNMKNMGLRLSIDDFGTGYSSLSYLKRFKADKLKIDRSFVRDIPQDADDSAIARAI 876 Query: 296 IDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKL 346 I+++K L++ V+A+G+ET +Q ++ + G +++G ++ PLPAD F L Sbjct: 877 INMAKNLNMQVVAEGVETMEQWQFLEQEGCDFVQGYLIAKPLPADDFAELL 927 >UniRef50_Q1JZ20 Diguanylate cyclase/phosphodiesterase n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JZ20_DESAC Length = 814 Score = 510 bits (1316), Expect = e-143, Method: Composition-based stats. Identities = 58/355 (16%), Positives = 134/355 (37%), Gaps = 12/355 (3%) Query: 1 MNTIKIKLNLIDYDSIVNIEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIKT-VSCQ 59 + + L L D + L + +LL ++ ++ SI + Sbjct: 454 LGGDEFALVLGDLN------NEESLIPLMQDLLKEISSPCHIDNHHIVVTASIGISLFPN 507 Query: 60 KMKLYKKLNVKSDLTLWRDVFLRFKAYLQPKNIICDNFNSSVLPVVSSKGESMAHYNIYY 119 L +DL +++ + ++ L + ++Y Sbjct: 508 DGNDSITLLRNADLAMYQSKRHKGDFTFYSSDMNQHAVKILELEKDLRQALERGELLLHY 567 Query: 120 QPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINKLFSPIKN 179 QP + ++G I GC+ I ++ + +D I + + + + Sbjct: 568 QPKVSLQSGKIVGCEALIRWQHPLRGLVSP-ADFIPLAEETGLIVPIGTWVLEQACQQAI 626 Query: 180 NL----PHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRY 235 + + +N++ ++ ++ L L+ + + Sbjct: 627 SWQQQQLPTITMAVNLSSRQFRHGNLCDVVDTILETTTLHPDLLDLEITESMIMDDPEGA 686 Query: 236 QSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTI 295 ++ ++ V LSL+DFG GY+ L++L+ P + + + D+ +S + +A +I Sbjct: 687 VQTMIALKERGVLLSLDDFGTGYSSLNYLRRFPVDCLKIDASFIRDVAQDSSSAAVAVSI 746 Query: 296 IDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLLASL 350 +D++ L + +A+G+ET +Q ++ + L+G S PLPA+ F L ++L Sbjct: 747 VDIAHHLGLTTVAEGVETVEQLDFLEKCHCDILQGYLYSRPLPAEDFTSLLRSNL 801 >UniRef50_Q5P4W8 Putative uncharacterized protein n=2 Tax=Proteobacteria RepID=Q5P4W8_AZOSE Length = 1039 Score = 510 bits (1316), Expect = e-143, Method: Composition-based stats. Identities = 59/352 (16%), Positives = 135/352 (38%), Gaps = 8/352 (2%) Query: 2 NTIKIKLNLIDYDSIVN-IEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIKT-VSCQ 59 +L ++ +V+ + L I +L++ L + +++ + S+ V Sbjct: 673 EDTVARLGGDEFTVVVHDLADRADLGAIADKLVAVLREPFALRGARHHISGSVGITVFPD 732 Query: 60 KMKLYKKLNVKSDLTLWRDVFLRFKAYL-QPKNIICDNFNSSVLPVVSSKGESMAHYNIY 118 + L +D+ +++ ++ D L + ++ Sbjct: 733 DGDDVQTLLRNADIAMYKAKQAGKNRAQPYAPHMQADALARVHLEADLRMAVEQRAFELH 792 Query: 119 YQPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINKLF---- 174 YQPI + +G + G + I K+ + + + I + + + + Sbjct: 793 YQPIVDCASGALVGAEALIRWKHPERGMISP-LEFIPVAEECGLIVPIGEWVLREVVRQR 851 Query: 175 SPIKNNLPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRR 234 +T+N++ + + FGT R LV + + + Sbjct: 852 RDWLARGHPPLRLTLNVSGVQFREAGLPELVRTLLAEFGTARSSLVFEITESVLMGGSEN 911 Query: 235 YQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATT 294 ++ + I+ + +L+DFG G++ LS+L+ P V + ++ D + + Sbjct: 912 VEARMCDIKEQGICFALDDFGTGFSSLSYLKRFPVDIVKIDRSFVRDCPDDRNDATLVEA 971 Query: 295 IIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKL 346 II+++ L + V A+G+E+ +Q ++ G YL+G + PL ADAF + Sbjct: 972 IINMAHSLGLRVTAEGVESAEQREFLRALGCDYLQGYLIGKPLAADAFEALM 1023 >UniRef50_Q0BFB8 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=5 Tax=Burkholderia RepID=Q0BFB8_BURCM Length = 860 Score = 510 bits (1316), Expect = e-143, Method: Composition-based stats. Identities = 61/357 (17%), Positives = 138/357 (38%), Gaps = 13/357 (3%) Query: 1 MNTIKIKLNLIDYDSIVNIEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIK-TVSCQ 59 + + + L VN+ I ++L ++ ++++E S+ ++ Sbjct: 344 LGGDEFVVML------VNLATQADADVIARKILDTFIEPFTLDEHDLHVTTSVGVSLCPT 397 Query: 60 KMKLYKKLNVKSDLTLWRDVFLRFKAY-LQPKNIICDNFNSSVLPVVSSKGESMAHYNIY 118 + L +D L+ Y + + ++L + + +Y Sbjct: 398 DGTNAETLLKTADAALYAAKEHGRNCYRFYTRELGARVEEQTILENALHQAVANHELELY 457 Query: 119 YQPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINKLFS--- 175 YQP + K G I+G + I + D I + + + + + Sbjct: 458 YQPKVDLKTGQISGVEALIRWRRPGIGVIPPD-RFIPIAEDCGLILPIGEWVLRTACMQA 516 Query: 176 -PIKNNLPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRR 234 + I +N++ D+ ++ G L L+ + + Sbjct: 517 VAWRREGHPPIRIAVNLSARQFRQQDVAAMVRTTLEETGLAPDSLELELTESVLMQDCNA 576 Query: 235 YQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATT 294 +LR ++ V LSL+DFG GY+ LS+L+++P V + ++ D+ +++ + + Sbjct: 577 IAHTLRELKALGVVLSLDDFGTGYSSLSYLKDLPIDVVKIDRSFLDDVTTSAEGASLTRS 636 Query: 295 IIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLLASLK 351 II +++ LH++ +A+G+ET+ Q ++ ++G S P+ D L A + Sbjct: 637 IIAMAESLHMETVAEGVETEAQLSFLNRHRCHAMQGYYFSHPVTGDEIADMLSAGSQ 693 >UniRef50_C4KA21 Diguanylate cyclase/phosphodiesterase with Chase sensor n=1 Tax=Thauera sp. MZ1T RepID=C4KA21_THASP Length = 1093 Score = 510 bits (1316), Expect = e-143, Method: Composition-based stats. Identities = 59/355 (16%), Positives = 132/355 (37%), Gaps = 13/355 (3%) Query: 1 MNTIKIKLNLIDYDSIVNIEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIKT-VSCQ 59 + + + L + + E P + + +L L + ++ R SI + Sbjct: 741 IGGDEFVILLS---RLAHAEEP---ARVAERVLDALARPLQIDSQPLRVGASIGIALYPA 794 Query: 60 KMKLYKKLNVKSDLTLWRDVFLRFKAYLQP-KNIICDNFNSSVLPVVSSKGESMAHYNIY 118 L +D ++ AY + K ++ Sbjct: 795 DGGEIDTLLKHADTAMYEAKESGRNAYRFFLPEMTQRVTRRLQTEAELRKAIESGDLRLH 854 Query: 119 YQPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINKLFS--- 175 YQP +A +G + GC+ + ++ + D + + + L + + Sbjct: 855 YQPQIDAASGRVYGCEALVRWQHPERGLLPPD-RFVPFAEQSGLIVPLGEWVLREACLQQ 913 Query: 176 -PIKNNLPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRR 234 ++ + +NI+ D + G + R+ L+ + + Sbjct: 914 VRWRDAGLPPLDVAVNISALQFRRRDFVATVARVLGETGADPARIELEITESALMDATPE 973 Query: 235 YQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATT 294 +S ++ + L+L+DFG GY+ LS+L+ +P + + ++ + N I + Sbjct: 974 LVASFDQLVALGLTLALDDFGTGYSSLSYLKRLPLRRLKIDRSFVDGLPDNPEDAAITSA 1033 Query: 295 IIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLLAS 349 + L++ L ++V+A+G+ET+ Q GY+ +RG + ++G S PL + F Sbjct: 1034 TLSLARDLGMEVVAEGVETEDQRGYLCKRGCRAMQGYLFSRPLGVEEFGTWFEEQ 1088 >UniRef50_Q47A14 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q47A14_DECAR Length = 827 Score = 510 bits (1314), Expect = e-143, Method: Composition-based stats. Identities = 56/355 (15%), Positives = 121/355 (34%), Gaps = 13/355 (3%) Query: 1 MNTIKIKLNLIDYDSIVNIEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIKT-VSCQ 59 + + + L +I P + + +++S L + SI + Sbjct: 476 LGGDEFVIILP------SISSPADAAIVSGKIISALSTAIEAEGHELHTSPSIGISIFPD 529 Query: 60 KMKLYKKLNVKSDLTLWRDVFLRFKAYLQPKN-IICDNFNSSVLPVVSSKGESMAHYNIY 118 + +D ++ Y + + + ++ Sbjct: 530 DGPDGDIVLKNADTAMYHAKAAGRNNYQFFAADMNRTAAERLNIERKLRHAIARNELSLV 589 Query: 119 YQPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINKLFS--- 175 +QP + A++ G + + + + + I + + + Sbjct: 590 FQPQFRAEDTTPTGVEALLRWHHPTDGMISP-ARFIPVAEETGMIVEIGDWVLATACHEM 648 Query: 176 -PIKNNLPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRR 234 N I +N++ + D + + G L L+ + + + Sbjct: 649 ARWINAGLKPLRIAVNVSARQLRRRDFCETVANALTTSGLPAELLELEITESSVMENPQE 708 Query: 235 YQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATT 294 L R+ V L+++DFG GY+ L++L+ P ++ + ++ DIE + IA Sbjct: 709 AIHILERLGRMGVTLAIDDFGTGYSSLAYLKLFPIDHLKIDRSFVADIEHDLNDRAIAFG 768 Query: 295 IIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLLAS 349 I L+ L ++VIA+G+ET+ Q + G ++G S PL A L A Sbjct: 769 TIALAHSLGLNVIAEGVETEDQHELLRANGCDEVQGFLFSKPLTGAAAFAFLHAR 823 >UniRef50_C5V1I4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Gallionellaceae RepID=C5V1I4_9PROT Length = 935 Score = 510 bits (1314), Expect = e-143, Method: Composition-based stats. Identities = 57/353 (16%), Positives = 137/353 (38%), Gaps = 13/353 (3%) Query: 1 MNTIKIKLNLIDYDSIVNIEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIKT-VSCQ 59 + + L + DS + + +++ L + +++ E SI + Sbjct: 588 LGGDEFVALLSELDS------SEEVIFVAEKMIESLTEKFTLGEYQLSITPSIGICIYPD 641 Query: 60 KMKLYKKLNVKSDLTLWRDVFLRFK-AYLQPKNIICDNFNSSVLPVVSSKGESMAHYNIY 118 + +L +DL +++ ++ L ++Y Sbjct: 642 DGETSVELLRNADLAMYQAKDDGRNNFKFYSPDMNRKALERLKLETFLRVAIVQQQLSVY 701 Query: 119 YQPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINKL----F 174 YQP + +G + G + + ++ + + + I ++ + + + Sbjct: 702 YQPKVSVLSGKMTGMEALLRWQHPELGFISP-AVFIPIAEETGLINEIGDWVLRQSCLQA 760 Query: 175 SPIKNNLPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRR 234 + I +N++ + + + ++ G + LVL+ + + Sbjct: 761 RLWQAQGYDIVPIAVNLSARQLKQDNFAARVVTILREAGLDAHYLVLEITESMLMSTGES 820 Query: 235 YQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATT 294 L ++R++ V L+L+DFG GY+ LS L+N+P + + ++ DI ++ I + Sbjct: 821 GLQILEQLRDDGVRLALDDFGTGYSSLSRLKNLPLDSLKIDQSFVRDIVTDPNDASIVSA 880 Query: 295 IIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLL 347 L+ L++ V A+G+ET++Q ++ + +G S P+PA V+ L Sbjct: 881 TAVLAHALNLKVTAEGVETQEQLDFIRMLNCEEYQGYLFSRPIPASEVVKYFL 933 >UniRef50_Q0F127 Putative uncharacterized protein n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0F127_9PROT Length = 529 Score = 510 bits (1314), Expect = e-143, Method: Composition-based stats. Identities = 62/355 (17%), Positives = 134/355 (37%), Gaps = 13/355 (3%) Query: 1 MNTIKIKLNLIDYDSIVNIEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIKT-VSCQ 59 + + + L + P + + ++L+ L G+ ++ S + Sbjct: 178 LGGNRFVVLL------TGLAHPEDATIVTLKLMQALESGFCIDNHEVVMTISTGIAIFPG 231 Query: 60 KMKLYKKLNVKSDLTLWRDVFLRFKAYLQPKNIICD-NFNSSVLPVVSSKGESMAHYNIY 118 + L ++ +++ Y K N + K + ++ Sbjct: 232 DGDDSEALLQSAEQSMYSVKADGGNNYQFFKASTQSSAINRLNMESEMRKAIERGEFVLH 291 Query: 119 YQPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHI----NKLF 174 YQP NA +G++ G + I ++ + I+ + + + + Sbjct: 292 YQPQINATSGHVVGMEALIRWQHPERGMI-PPYHFISVAEETGMIVPIGEWVMYEACRQN 350 Query: 175 SPIKNNLPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRR 234 + + +N++ + + H +K G L L+ + + I Sbjct: 351 KAWHDAGLAELKVAVNLSARQFSDRKLLDKVRHALKQSGLNPAFLELEITESVIMKDIEA 410 Query: 235 YQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATT 294 + L I + + L+++DFG GY+ L++L+ P + + K+ D+ S+ I Sbjct: 411 TIALLEEIASMGLSLAIDDFGTGYSSLNYLKRFPIDKLKIDKSFIDDVISSEDDGKIVEA 470 Query: 295 IIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLLAS 349 II LS L ++VI +G+E +Q ++ ER ++G S PLPAD F + + Sbjct: 471 IIGLSHNLKLNVICEGVEDAEQFAWLQERQCNEIQGYYFSKPLPADEFEAFVRSR 525 >UniRef50_Q1K1R0 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1K1R0_DESAC Length = 709 Score = 510 bits (1314), Expect = e-143, Method: Composition-based stats. Identities = 64/356 (17%), Positives = 139/356 (39%), Gaps = 13/356 (3%) Query: 1 MNTIKIKLNLIDYDSIVNIEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIKT-VSCQ 59 M+ + LI D N+ ++++ + LS + + SI + Sbjct: 355 MSGDEF---LITLDPADNLS---EVTQLAQKFLSVISVPMKIEHHRFHLTASIGISLFPG 408 Query: 60 KMKLYKKLNVKSDLTLWRDVFLRFKAYLQPKNIICDNFNSSV-LPVVSSKGESMAHYNIY 118 +KL +D ++R A+ K + + + L ++ Sbjct: 409 DATSPEKLLSCADSAMYRAKESGRDAFRFYKPHMNEKAQGLLWLETELRLAIEQEQLELH 468 Query: 119 YQPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHI----NKLF 174 YQP Y+ G + G + + + + + I + + L + + Sbjct: 469 YQPQYDLNTGQLVGMEALVRWNHPEKGMI-PPGEFIPQAEETSLIIPLGEWVLNTACRQI 527 Query: 175 SPIKNNLPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRR 234 + + +NI+ D+ + + +G L L+ + + + Sbjct: 528 AAWHAMGISPIRMAVNISAVQFYRIDLAQMVAKLLDHYGLPATLLELEITESVLMDDVEA 587 Query: 235 YQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATT 294 ++ ++ + LS++DFG GY+ LS+L+ P S + + ++ +D+ N IA + Sbjct: 588 AAETMNKLTAMGIQLSIDDFGTGYSSLSYLKRFPISTLKIDRSFINDVTINEQDAAIALS 647 Query: 295 IIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLLASL 350 II L+ + I+V+A+G+ET +Q ++ +Y +G + PLPA R+L + Sbjct: 648 IISLAGHMGIEVLAEGVETVEQLSFLQRHACQYGQGYLFNRPLPAKDIERQLKTAH 703 >UniRef50_B9Z8G8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z8G8_9NEIS Length = 887 Score = 510 bits (1314), Expect = e-143, Method: Composition-based stats. Identities = 63/355 (17%), Positives = 135/355 (38%), Gaps = 7/355 (1%) Query: 2 NTIKIKLNLIDYDSIVNIEFPCLLSEIEIELLSQLLKGYSV-NEISKRRNRSIKT-VSCQ 59 +L ++ ++ ++ I LL + + + SI + Sbjct: 527 EDTLARLGGDEFLVVIEEAPVQQVASIAHALLKVVDQPFGFSGGGEAYVGASIGISLYPG 586 Query: 60 KMKLYKKLNVKSDLTLWRDVFLRFKAYLQPKNIICDNF-NSSVLPVVSSKGESMAHYNIY 118 + +L +D ++ AY + + + + ++ Sbjct: 587 DGRSASELIRNADAAMYLAKAQGSNAYRFYTESLTRAANERLSMETSLRRALRCEEFVLH 646 Query: 119 YQPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINKLFSPIK 178 YQP+ +G + G +V + + G A S I + L + Sbjct: 647 YQPLVELASGRVLGAEVLVRWQ-PPGEALVPPSRFIPLAEETGLIVPLGDWVLHEACRQG 705 Query: 179 NNLPH---GFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRY 235 + +N++P L D+ + ++ G +L L+ + + + Sbjct: 706 KAWLDAGLPLLLAVNLSPRQFLRHDLVGQVRKALQGSGLPPAQLELELTEGALMEQAEQA 765 Query: 236 QSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTI 295 +L ++ V L+++DFG GY+ L++L+ P + + ++ D+ +S I TTI Sbjct: 766 VKTLHALKRLGVSLAIDDFGTGYSSLAYLKRFPLDKLKIDRSFVRDLPRDSSDAEIVTTI 825 Query: 296 IDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLLASL 350 I + + L ++ +A+G+ET +Q ++ + G +G S PLPA+AF R L Sbjct: 826 IAMVRNLKLEALAEGVETPQQLAFLRQLGCDSGQGYLFSPPLPAEAFERWLRDGR 880 >UniRef50_A1ASK8 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Proteobacteria RepID=A1ASK8_PELPD Length = 858 Score = 509 bits (1313), Expect = e-143, Method: Composition-based stats. Identities = 63/356 (17%), Positives = 139/356 (39%), Gaps = 17/356 (4%) Query: 1 MNTIKIKLNLIDYDSIVNIEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIKT-VSCQ 59 + + L L + + P + + +L +L + + + S+ + + Sbjct: 352 LGGDEFVLLLAE------VTEPDDVGLLASRILHELAVPHRIEGREIVMSASLGISLYPK 405 Query: 60 KMKLYKKLNVKSDLTLWRDVFLR---FKAYLQPKNIICDNFNSSVLPVVSSKGESMAHYN 116 L +D+ ++R F Y N + + + Sbjct: 406 DSGDGSTLIRNADIAMYRAKQEGGGVFSFYAPEMN--QRAMETMEIESALRLALERGEFT 463 Query: 117 IYYQPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHI----NK 172 +YYQP + +G I+GC+ I + A +D I + + + + Sbjct: 464 LYYQPKVDLASGRISGCEALIRWLHPRRGVVAP-ADFIPLAEETGLIVPIGTWVLKEACR 522 Query: 173 LFSPIKNNLPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYII 232 + + +N++ T D+ + G + L L+ + + Sbjct: 523 QVRAWQAEGVPIANVAVNLSARQFRTGDLPGLVREVLGETGLDPHLLELEMTESMVMADH 582 Query: 233 RRYQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIA 292 + + + + V LSL+DFG GY+ +HL + P +++ + ++ I ++ + IA Sbjct: 583 AQVVAVMEELTAIGVRLSLDDFGTGYSSFAHLSHFPINHLKIDRSFIKQIVTDPNSATIA 642 Query: 293 TTIIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLLA 348 T+II ++ ++ + IA+G+ET+ Q Y+ ++G ++G LS PLPA + + Sbjct: 643 TSIIAMAHRMRLKAIAEGVETEAQLAYLRKQGCDEIQGYLLSRPLPASEYAALVRR 698 >UniRef50_Q74A79 Sensory box/GGDEF family protein n=1 Tax=Geobacter sulfurreducens RepID=Q74A79_GEOSL Length = 873 Score = 509 bits (1312), Expect = e-143, Method: Composition-based stats. Identities = 54/359 (15%), Positives = 127/359 (35%), Gaps = 13/359 (3%) Query: 1 MNTIKIKLNLIDYDSIVNIEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIKT-VSCQ 59 + + + L N+ + + L + + S+ + Sbjct: 515 LGGDEFVIVL------TNLTRMDDAVTVAESFRNLLAMPFFLGGREIFITASMGISLFPD 568 Query: 60 KMKLYKKLNVKSDLTLWRDVFLRFKAYLQPKNIICDNFN-SSVLPVVSSKGESMAHYNIY 118 + L K+D ++ ++ + N + + ++ Sbjct: 569 DGDTMEALIKKADTAMYHIKESGRNSFQFFAEEMNQKVNARLTIETGLRRALEKGEMLLH 628 Query: 119 YQPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINKLFS--- 175 YQP G + G + + + D + +D I + + + + Sbjct: 629 YQPRLEPGTGAVVGMEALVRWNSPDMGLISP-ADFIPIAEDSGLIVEIGDWVLATACCQA 687 Query: 176 -PIKNNLPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRR 234 +++NI+ + D + I+ G + L+ + + + Sbjct: 688 LEWHRMGHDSLRVSVNISARQFVGHDFVDRVVRIIEQSGLSPHFVELELTETALTHNVDE 747 Query: 235 YQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATT 294 + R+R + +S++DFG GY+ L++L+ P + + K+ D+ I T Sbjct: 748 TVKIMNRLRERGITISIDDFGTGYSSLNYLKRFPVDVLKIDKSFIDDMVKRREDAAIVAT 807 Query: 295 IIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLLASLKQV 353 II ++ +H+ V+A+G+ET +Q ++E + ++G S PLP + F R + + Sbjct: 808 IIGIAHHMHMKVVAEGVETAEQMKLLMEGNCEEIQGFYFSRPLPPEEFERYIAGRTVPL 866 >UniRef50_B9M6C9 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Geobacter sp. FRC-32 RepID=B9M6C9_GEOSF Length = 845 Score = 509 bits (1312), Expect = e-143, Method: Composition-based stats. Identities = 58/352 (16%), Positives = 133/352 (37%), Gaps = 8/352 (2%) Query: 3 TIKIKLNLIDYDS-IVNIEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIKT-VSCQK 60 ++ +Y+ I + P + I ++LS + K ++++ SI + Sbjct: 495 DTVARIGGDEYNILITQMAHPEDATAIANKILSSMNKPFAIDGHQLHVTISIGISLYPTD 554 Query: 61 MKLYKKLNVKSDLTLWRDVFLRFKAYLQP-KNIICDNFNSSVLPVVSSKGESMAHYNIYY 119 + + L +D+ L+ Y + + + + Y Sbjct: 555 GEDAETLLKNADIALYHAKEQGRNNYQFYNPALNTRTLERVKMENRLRQALERHELVVLY 614 Query: 120 QPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINKLFSP--- 176 QP G + G + + + + + I ++ + + + Sbjct: 615 QPQVAMDTGQVTGAEALVYWLHPELGLLSP-GHFIPMAEEIGFITDIDEWVLETACAQNK 673 Query: 177 -IKNNLPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRY 235 ++ F +T+N++ + D+ + + G L L+ + + I Sbjct: 674 AWQDEGYRSFNVTVNMSSKQFRRPDLVDQVRRVLNATGLPPRFLELEITEGTAMKDIEYT 733 Query: 236 QSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTI 295 SL + V +++DFG GY+ LS L+ +P + + K+ + ++ I TI Sbjct: 734 IPSLNTLTGMEVGFAIDDFGTGYSSLSCLKKLPIRKLKIDKSFIFGVNTDPNDKAIVATI 793 Query: 296 IDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLL 347 I ++ L ++VIA+G+E Q ++ + ++G S P+PA+ F R ++ Sbjct: 794 IAMAHNLKLEVIAEGVEDADQLEFLHQNHCDQMQGFLYSRPIPAEDFRRLIM 845 >UniRef50_B8H3B9 Sensory box/GGDEF family protein n=5 Tax=Caulobacteraceae RepID=B8H3B9_CAUCN Length = 748 Score = 509 bits (1312), Expect = e-143, Method: Composition-based stats. Identities = 61/348 (17%), Positives = 141/348 (40%), Gaps = 4/348 (1%) Query: 2 NTIKIKLNLIDYDSI-VNIEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIK-TVSCQ 59 +L ++ + ++ + + ++ + + + S+ +++ Sbjct: 351 GDTVARLGGDEFAIVQTGLDDSNGATRLAARIVEAMAAPFDLQGHHVVIGASVGVSLAPT 410 Query: 60 KMKLYKKLNVKSDLTLWRDVFLRFKAY-LQPKNIICDNFNSSVLPVVSSKGESMAHYNIY 118 +L K+D+ L+R AY + + L + + + ++ Sbjct: 411 DGDDADELLKKADMALYRAKADGRGAYHFFERAMDEQLQARRALELDLRRALQAGEFELF 470 Query: 119 YQPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINKLFSPIK 178 YQP+Y+ + + GC+ + ++ + + +D I + L + + Sbjct: 471 YQPLYHLGDERVTGCEALLRWRHPERGMVSP-ADFIPLAEEIGLIVQLGEWVLRRACAEA 529 Query: 179 NNLPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSS 238 N P + +N++P + R + + G RL L+ + L + + Sbjct: 530 ANWPEHVRLAVNLSPAQFRDRGLVRTVVSALAASGLPAQRLELEITESVLLQDSQANMTM 589 Query: 239 LRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDL 298 L ++ V +S++DFG GY+ LS+L++ PF + + +T DI +S I ++DL Sbjct: 590 LHDLKALGVRISMDDFGTGYSSLSYLRSFPFDKIKIDQTFVRDILHDSDAMAIIKAVLDL 649 Query: 299 SKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKL 346 + + A+G+ET+ Q + ++G ++G +S P PA + L Sbjct: 650 GASMGVVTTAEGVETQAQLDALRQQGCAEIQGYFISRPAPASEIAKML 697 >UniRef50_Q3A4W5 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A4W5_PELCD Length = 1274 Score = 509 bits (1312), Expect = e-143, Method: Composition-based stats. Identities = 60/355 (16%), Positives = 135/355 (38%), Gaps = 13/355 (3%) Query: 1 MNTIKIKLNLIDYDSIVNIEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIKTVSCQ- 59 + + + L D + +I LL +L + + ++ + S + Sbjct: 890 LGGDEFVVLLTD------VRDTTAAGKIAHNLLRKLNEPFFLHGRELYVSASFGICLSET 943 Query: 60 KMKLYKKLNVKSDLTLWRDVFLRFKAYLQPKNIICDNFNSSVLPVVSSKGESMAHYNIYY 119 L +D+ +++ Y + + + + + +YY Sbjct: 944 DNVDGTILLRNADIAMYKAKAEGCGLYFYSHEMNEHLIKTLEMENSLRQALEKNEFQLYY 1003 Query: 120 QPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHI----NKLFS 175 QP G I GC+ + ++ S+ I + + + + Sbjct: 1004 QPKVEHATGRIIGCEALLRWRHPQRGMI-PPSEFIPLAEETGLIVQIGHWVLAEACRQSK 1062 Query: 176 PIKNNLPHGFFITININPEDILT-CDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRR 234 + + +NI+ ++ + ++ +L L+ + + Sbjct: 1063 IWETEGLPPLTMAVNISARQFYQGENLIQAVKSTLERSQLVPSQLELELTESMVMKDAVN 1122 Query: 235 YQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATT 294 + ++R+I+ V LSL+DFG GY+ L++L++ P + + ++ DI S++ + I + Sbjct: 1123 AERTMRKIKQLGVSLSLDDFGTGYSSLNYLRSFPVDSLKIDRSFILDIASDASSAAILNS 1182 Query: 295 IIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLLAS 349 II ++ L + +A+G+E Q + G Y++G S PLP + FV LA+ Sbjct: 1183 IIAIAHTLGLQTVAEGVENNDQLALVANCGCNYIQGYLFSRPLPPEDFVALFLAN 1237 >UniRef50_A5GBG4 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Geobacter RepID=A5GBG4_GEOUR Length = 709 Score = 508 bits (1311), Expect = e-143, Method: Composition-based stats. Identities = 61/351 (17%), Positives = 134/351 (38%), Gaps = 13/351 (3%) Query: 2 NTIKIKLNLIDYDSIVNIEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIKT-VSCQK 60 + + L D D + + +++ + + + +I + I + Sbjct: 350 GGDEFIILLPDIDDV------QEAVRVAQKIIDAFTQVFVLPDIELFISTCIGISIFPND 403 Query: 61 MKLYKKLNVKSDLTLWRDVFLRFKAY-LQPKNIICDNFNSSVLPVVSSKGESMAHYNIYY 119 + + L +D+ ++R Y L ++ F + K +++YY Sbjct: 404 GRDTETLIKNADMAMYRAKEQGRSRYHLYTSSMDEQAFRRLTMENSLRKALQREEFSLYY 463 Query: 120 QPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINKLFSPIKN 179 QP N K G I + + +N + + I + + L + + Sbjct: 464 QPKVNIKTGQIVCLEALVRWQNPEMGLILP-NQFIPLAEDTGLIIPLGEWVLRTACAQNK 522 Query: 180 NLP----HGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRY 235 + +N +P + + L L+ + L + + Sbjct: 523 TWQLLNYPPMRVAVNFSPRQFQQPRLTDMVEQILGEADLAPCWLELELTENVMLQNVEKT 582 Query: 236 QSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTI 295 +L R+ N +++S++DFG GY+ LS+++ +P + + ++ HDI +N+ IA + Sbjct: 583 VQTLNRLSNLGIHISIDDFGTGYSSLSYIKKLPIQTLKIDRSFVHDINTNADDAAIAIAV 642 Query: 296 IDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKL 346 I +++ L ++VIA+G+ET +Q + ++G S PLP L Sbjct: 643 ITMAQSLRLNVIAEGVETLEQMKLLDGLNCPEMQGYLFSKPLPVAEMTTLL 693 >UniRef50_Q221U3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Rhodoferax ferrireducens T118 RepID=Q221U3_RHOFD Length = 1037 Score = 508 bits (1311), Expect = e-143, Method: Composition-based stats. Identities = 52/351 (14%), Positives = 139/351 (39%), Gaps = 7/351 (1%) Query: 7 KLNLIDYDSIVNIEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIKT-VSCQKMKLYK 65 +L ++ ++ S++ +LL+ + + + + SI + + ++ Sbjct: 688 RLGGDEFILLLPGTDEAQASQVATKLLAAVAQPCQIEQNELVSTVSIGIALYPNDGQDFE 747 Query: 66 KLNVKSDLTLWRDVFLRFK-AYLQPKNIICDNFNSSVLPVVSSKGESMAHYNIYYQPIYN 124 L+ +D ++R + + + + L + +++QP Sbjct: 748 TLSKNADAAMYRVKQASRNDFRFFTQEMQTHSARTLQLVNALRHALPRHEFELHFQPQVA 807 Query: 125 AKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINK----LFSPIKNN 180 ++G+I G + + ++ + + ++ I + ++ + + + + Sbjct: 808 LQDGHIVGAEALLRWRHPELGMISP-AEFIPIAEDSGQILAIGEWVLRTAVRQLKQWLDA 866 Query: 181 LPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSLR 240 I +N++ ++ + L L+ + + + + Sbjct: 867 GLRPMVIAVNLSAVQFRHPNLMALVTRILDEAALPPEFLELELTEAAAMDDPPAAIAIMN 926 Query: 241 RIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSK 300 ++ + + +S++DFG GY+ LS+L+ + + + ++ DI + I T II+L+ Sbjct: 927 KLDEHGIRMSIDDFGTGYSSLSYLKKFKVNKLKIDQSFVRDISDDPDDKAIVTAIINLAS 986 Query: 301 QLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLLASLK 351 L + IA+G+ET Q ++ +G ++G +S PLP D F + S+ Sbjct: 987 SLGMHTIAEGVETASQLAFLRLQGCDEVQGYYVSKPLPKDQFEAFVRNSIS 1037 >UniRef50_B9Z192 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z192_9NEIS Length = 943 Score = 508 bits (1311), Expect = e-143, Method: Composition-based stats. Identities = 60/355 (16%), Positives = 130/355 (36%), Gaps = 13/355 (3%) Query: 2 NTIKIKLNLIDYDSIVNIEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIKT-VSCQK 60 + + L I P + + L + S SI V Sbjct: 586 GGDEFIVLLPL------IADPGSAALAAERIREVLEPPVELFNHSISITPSIGISVFPDD 639 Query: 61 MKLYKKLNVKSDLTLWRDVFLRFKAY-LQPKNIICDNFNSSVLPVVSSKGESMAHYNIYY 119 + ++ L +D ++ +Y ++ + + ++Y Sbjct: 640 GRDFETLVRNADAAMYHAKSAGRNSYKFYTADLNARAREILEIESQLRYALDRDEFVLHY 699 Query: 120 QPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHI----NKLFS 175 QP + K G I G + I ++ + I + + + + + Sbjct: 700 QPQVDLKTGEIIGAEALIRWQHPELGLLGP-VRFIEVAEERGFIVQIGNWVIQEACRQLA 758 Query: 176 PIKNNLPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRY 235 + + +N++ D+ + G L ++ + + + Sbjct: 759 QWRRQGLPRISLAVNLSTLQFRQQDLAVHLQRALSAHGLVGSDLDVEVTESVIMDDVETT 818 Query: 236 QSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTI 295 ++ RI++ + LS++DFG GY+ LS+L+ + + ++ DI ++ IA I Sbjct: 819 IHTIDRIKSMGLQLSIDDFGTGYSSLSYLKRFKADKLKIDRSFVRDIPMDADDSAIARAI 878 Query: 296 IDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLLASL 350 I+++K L++ VIA+G+ET +Q ++ G +G L+ P+PA F R L + Sbjct: 879 INMAKNLNMTVIAEGVETIEQWKFLDREGCHAAQGYLLAKPVPAKEFERLLEKGV 933 >UniRef50_Q1NRJ4 PAS:GGDEF:EAL:GAF n=5 Tax=Deltaproteobacteria RepID=Q1NRJ4_9DELT Length = 1052 Score = 508 bits (1311), Expect = e-143, Method: Composition-based stats. Identities = 56/354 (15%), Positives = 129/354 (36%), Gaps = 12/354 (3%) Query: 2 NTIKIKLNLIDYDSIVNIEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIKT-VSCQK 60 + L L I + +L K + + SI + Sbjct: 703 GGDEFYLLLGRLTDID------TAVQAAQNVLELFSKPFQAADHQLYLTPSIGITLFPDD 756 Query: 61 MKLYKKLNVKSDLTLWRDVFLRFKAYLQPKN-IICDNFNSSVLPVVSSKGESMAHYNIYY 119 + + L + ++ ++ + + + + + + +YY Sbjct: 757 GEEVESLIQSVETAMYHAKKDGGNSFQFFQETMFTAALGRMTMKNRLRRAVELEEFELYY 816 Query: 120 QPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINKLFSP--- 176 QP A + G + I + ++ I + + + + Sbjct: 817 QPKIAADGRTVVGAEALIRWVQPERGGPVSPAEFIPLAEETGLIIPIGEWVLRQACRQSL 876 Query: 177 -IKNNLPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRY 235 + I +N++ ++ E ++ G L L+ + + + Sbjct: 877 LWQQAGLPPLRIAVNLSAVQFKQPGLDDEINWILQEIGLPAELLELEITESLLMEDVTTA 936 Query: 236 QSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTI 295 ++L ++++ ++L+L+DFG GY+ LS+L+N P + + + D+ ++ + TI Sbjct: 937 NATLWKLKDMGIHLALDDFGTGYSSLSYLKNFPLDTLKIDREFVRDLSTDDEDRAVIITI 996 Query: 296 IDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLLAS 349 I L+ L ++V+A+G+E Q ++ +RG +G S PLPA F + L + Sbjct: 997 ITLAHSLKMEVVAEGVEDADQVAFLRQRGCDVFQGYHFSRPLPAKEFEQFLRSQ 1050 >UniRef50_C1DBY5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor n=3 Tax=Neisseriaceae RepID=C1DBY5_LARHH Length = 839 Score = 508 bits (1311), Expect = e-143, Method: Composition-based stats. Identities = 52/356 (14%), Positives = 148/356 (41%), Gaps = 8/356 (2%) Query: 2 NTIKIKLNLIDYDSIV-NIEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIKT-VSCQ 59 + +L +++ ++ +I +++ +L+ ++ +++ S+ + Sbjct: 479 SDTVARLGGDEFNIVLEDIRDLRGVAQTAQKLIDRVQGMVTLDGHDVYVTASVGIAIYPD 538 Query: 60 KMKLYKKLNVKSDLTLWRDVFLRFKAYLQPKN-IICDNFNSSVLPVVSSKGESMAHYNIY 118 + L + +D ++R + + L + + + ++ Sbjct: 539 DGSTPEVLRMNADTAMYRAKERGKNNFQFFTADMNASTLARLRLESNLHRALARQEFQLH 598 Query: 119 YQPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINKLFSPIK 178 +QP + +G+I G + + ++ + + +D I N +S + + + Sbjct: 599 FQPKVDLAHGHIYGMEALLRWRSHELGPVSP-ADFIPIAEESNLISTIGEWVLEQACRQA 657 Query: 179 NNLPH----GFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRR 234 + + + +N++ + + DI ++ L L+ + + Sbjct: 658 RHWLNLGLLPGTVAVNLSSKQMTQGDIVATVRRILEHSNLPGHYLELEITESVAMDNTGE 717 Query: 235 YQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATT 294 +L+ ++ V ++++DFG GY+ LS+L+ +P + + ++ D+ + IA+ Sbjct: 718 MIRTLKNLKALGVRIAIDDFGTGYSSLSYLKQLPIDVLKIDRSFVTDLHEDRDDAAIASA 777 Query: 295 IIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLLASL 350 II + + L++ +A+G+E ++ ++++ G +Y +G S P+PA + LL S Sbjct: 778 IISMGQSLNLQPVAEGVEREEHRQFLLDHGCQYGQGYLFSRPVPAATMEQLLLESQ 833 >UniRef50_C6P1A0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P1A0_9PROT Length = 1011 Score = 508 bits (1311), Expect = e-142, Method: Composition-based stats. Identities = 56/356 (15%), Positives = 137/356 (38%), Gaps = 10/356 (2%) Query: 1 MNTIKIKLNLIDYDSIVNIEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIKTVSCQK 60 + + + L D + ++ + ++L+ L Y + + + SI Sbjct: 659 IGGDEFVVMLEDLSDNI-LDAAEQTESVGSKILASLNVPYQLGIHTYDNSPSIGATLFND 717 Query: 61 -MKLYKKLNVKSDLTLWRDVFLRFKAYLQPKNIICDNF-NSSVLPVVSSKGESMAHYNIY 118 +L ++D+ +++ + + L + K + +Y Sbjct: 718 NHNSIDELLKQADIAMYQAKKAGRNTMRFFDPRMQQSLSARLALELELRKAIEKDQFQLY 777 Query: 119 YQPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINKLFSPIK 178 YQ + + G + + + + A ++ I + + + + Sbjct: 778 YQIQVD-ETHRPLGAEALLRWMHPEHGLMAP-AEFIPMAEETGLIVPIGWWVLETACTQL 835 Query: 179 NNLPHG-----FFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIR 233 ++IN++ + D + + +G + L L+ + L + Sbjct: 836 KAWEKDPLTRNLVLSINVSAKQFHQPDFVDQVQAAVDHYGIDPALLKLELTESILLENVD 895 Query: 234 RYQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIAT 293 + ++ V SL+DFG GY+ L +L+ +P + + ++ +I S+S I + Sbjct: 896 TTIKRMSALKKTGVGFSLDDFGTGYSSLQYLKRLPLDQLKIDQSFMQEITSDSSDMAIVS 955 Query: 294 TIIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLLAS 349 TII +++ + + VIA+G+ET++Q ++ +G + +G S P+P + F + L Sbjct: 956 TIIAMAQSMQMGVIAEGVETEEQRQLLLRKGCNHFQGYLFSKPVPVEQFEKLLHRG 1011 >UniRef50_A0L8C6 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Bacteria RepID=A0L8C6_MAGSM Length = 720 Score = 508 bits (1310), Expect = e-142, Method: Composition-based stats. Identities = 53/348 (15%), Positives = 129/348 (37%), Gaps = 8/348 (2%) Query: 7 KLNLIDYDSIV-NIEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIK-TVSCQKMKLY 64 +L ++ ++ N+ + + E+L+++ + +++E+ SI TV + Sbjct: 361 RLGGDEFGIVLPNMTQNRDAALLAQEVLTRVAQPITISEVEFAVGASIGMTVYPLDGEKP 420 Query: 65 KKLNVKSDLTLWRDVFLRFKAYLQPK-NIICDNFNSSVLPVVSSKGESMAHYNIYYQPIY 123 L ++ ++ + + + + +L + ++YQP Sbjct: 421 SVLMRNAESAMYHAKQSGRNNFQFYRSELNTASLARILLESGLRNAVDRQEFLLFYQPQM 480 Query: 124 NAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINKLFSPIKNNLPH 183 G + G + I ++ + + + I V + K Sbjct: 481 ELATGKLIGMEALIRWQHPEQGMVSP-GEFIPLAEETGLVIPMGQWALKEACRQSKVWMD 539 Query: 184 ----GFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSL 239 I++N++ D + + G L L+ + + + L Sbjct: 540 QTGVPLRISVNLSGIQFRLPDFTEMVMRTVGESGLPPHCLELELTESIAMGDVEETLEKL 599 Query: 240 RRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLS 299 + V L+++DFG G++ LS+L+ P + + ++ + + I I+L+ Sbjct: 600 TILSRFGVLLAIDDFGTGFSSLSYLKKFPIDTLKIDQSFVRNCTRDPEDAAIIRAFINLA 659 Query: 300 KQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLL 347 L+++VIA+G+E +Q ++ + ++G PL D F +L Sbjct: 660 HSLNLEVIAEGVEHLEQLEFLAQESCDEIQGYFYGRPLSGDKFEMFML 707 >UniRef50_A1TI51 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=15 Tax=cellular organisms RepID=A1TI51_ACIAC Length = 1499 Score = 508 bits (1309), Expect = e-142, Method: Composition-based stats. Identities = 64/358 (17%), Positives = 135/358 (37%), Gaps = 11/358 (3%) Query: 1 MNTIKIKLNLIDYDSIVNIEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIKTVSCQK 60 + + + + + E + ++L+ L Y + R SI Sbjct: 1142 LGGDEFVVMIEGLSTHPG-ELAMSARTVGEKILAVLATPYVLQGYHYRSTPSIGVAPFGD 1200 Query: 61 MKLYK--KLNVKSDLTLWRDVFLRFKAYLQPKN-IICDNFNSSVLPVVSSKGESMAHYNI 117 + +L ++DL +++ + + L + + + Sbjct: 1201 GRTSTVGELLKQADLAMYQAKTAGRNTLRFFDPGMQAVVTARAELENDLRTALAREQFML 1260 Query: 118 YYQPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINKLFSPI 177 +YQP + + G++ G + + + + + I V L + Sbjct: 1261 HYQPQID-RRGSVTGVEALVRWPHPQRGMVSP-GEFIPLAEETGLVLPLGRWVLHTACAQ 1318 Query: 178 KNNLPH-----GFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYII 232 H + +N++ + + I G RL L+ + + + Sbjct: 1319 LARWQHVPGRGHLSMAVNVSSRQFHHEAFVEDVVRAITATGAPASRLKLELTESLFVEDM 1378 Query: 233 RRYQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIA 292 +++ +R++ V SL+DFG GY+ LS+L+ +P + + ++ D+ ++ I Sbjct: 1379 ETTIATMAALRSHGVGFSLDDFGTGYSSLSYLKRMPLDQLKIDQSFVRDLLADPNDAAIV 1438 Query: 293 TTIIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLLASL 350 TII LS+ L +DVIA+G+ET +Q + + G + +G S PLP A L+ L Sbjct: 1439 DTIIALSRSLGLDVIAEGVETAEQRTRLEQAGCRAYQGYFFSRPLPETALEDFLVQKL 1496 >UniRef50_Q3A2X0 Motility repressor MorA n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A2X0_PELCD Length = 643 Score = 508 bits (1309), Expect = e-142, Method: Composition-based stats. Identities = 54/356 (15%), Positives = 129/356 (36%), Gaps = 14/356 (3%) Query: 1 MNTIKIKLNLIDYDSIVNIEFPCLLSEIEIELLSQLLK-GYSVNEISKRRNRSIKT-VSC 58 + + + L + I+ ++ ++L+ L + + + SI + Sbjct: 271 LGGDEFVVVLNE------IDSATCAAKKTEKILASLRDNPFDLVVAKVFASASIGIALFP 324 Query: 59 QKMKLYKKLNVKSDLTLWRDVFLRFKAYLQPK-NIICDNFNSSVLPVVSSKGESMAHYNI 117 Q + + L +D+ ++ + Y + L V + + + Sbjct: 325 QNGRDAETLLKHADMAMYEAKNVGRNTYRFFSDELHRRTIERHKLEVGLRRAVRKKEFFL 384 Query: 118 YYQPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINKLFS-- 175 YQP + G I + + ++ + S I + + I + Sbjct: 385 VYQPQVDLGTGRIVALEALVRWQHPEAGVLLP-STFIPVAEETGLIHIMGEWILRTACHQ 443 Query: 176 --PIKNNLPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIR 233 + I +N + D+ + G L L+ + + + Sbjct: 444 AMQWQRMGLPPMRIAVNFSARQFRQPDLVERIEQILLESGLPPHHLELEITESVFMENLE 503 Query: 234 RYQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIAT 293 +L ++ + ++++DFG GY+ L++L+N P + + + DI + I Sbjct: 504 SAIETLVDLKTRAIQIAIDDFGTGYSSLNYLKNFPLDRLKIAQDFVRDIPDDEDDATIIE 563 Query: 294 TIIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLLAS 349 TI+ ++ +L I V+A+G+ET +Q ++ +G ++G + P+ A+ L Sbjct: 564 TIMAMANRLGIKVLAEGVETMEQVTFLRRKGCHEMQGFYFARPMQAEEIAGFLNQR 619 >UniRef50_C1DB08 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1DB08_LARHH Length = 1092 Score = 507 bits (1308), Expect = e-142, Method: Composition-based stats. Identities = 56/357 (15%), Positives = 132/357 (36%), Gaps = 14/357 (3%) Query: 2 NTIKIKLNLIDYDSIVNIEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIKT-VSCQK 60 + L L V +L ++ +LL+ + ++ + R S+ V + Sbjct: 738 GGDEFVLVLPGLSDCV------VLEQLAEQLLADVSSPILLDGLDLRVTPSLGVAVFPRD 791 Query: 61 MKLYKKLNVKSDLTLWRDVFLRFKAYLQP-KNIICDNFNSSVLPVVSSKGESMAHYNIYY 119 L +D L+ Y + I + + ++Y Sbjct: 792 GNDCDALLRHADAALYHAKSRGRNTYRFFTREIDDRVSEYLHIEHGLRSALERGEFELHY 851 Query: 120 QPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINKLFSP--- 176 QP + G + G + + K+ + + + + + + + Sbjct: 852 QPQVDMAFGRVVGVEALLRWKHPEQGMISP-VRFVPIAEETGLIVPIGMWVIREACRQAM 910 Query: 177 -IKNNLPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRY 235 + + +N++ + + G + L ++ + + + Sbjct: 911 LWRRAGLRPMTMAVNLSGRQFSRS-VIEAIDEALADSGLDPRWLQVEVTESVIMEDTQEA 969 Query: 236 QSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTI 295 + L +R + ++++DFG GY+ L++L+ P + + ++ DI+ + +I I Sbjct: 970 YTVLEALRARGLTVAVDDFGTGYSSLAYLKRFPIDKLKIDRSFIRDIDLDEDNPVIVDAI 1029 Query: 296 IDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLLASLKQ 352 I ++ L I V+A+G+ET+ Q Y+ ++G ++G +S P PA A + +L Q Sbjct: 1030 IGMAHNLRIKVLAEGVETRAQWDYLRQQGCDEVQGYLVSRPQPAAALGQWMLERGMQ 1086 >UniRef50_A1TX84 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Marinobacter aquaeolei VT8 RepID=A1TX84_MARAV Length = 890 Score = 507 bits (1307), Expect = e-142, Method: Composition-based stats. Identities = 55/353 (15%), Positives = 139/353 (39%), Gaps = 8/353 (2%) Query: 2 NTIKIKLNLIDYDSI-VNIEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIKTV-SCQ 59 + +L ++ + +I + + +LL Q + ++N + SI + Sbjct: 536 SDTVARLGGDEFMILSTDIRDERAAATLAQKLLRQFRQKVAINGHEIIASASIGIAMFPK 595 Query: 60 KMKLYKKLNVKSDLTLWRDVFLRFK-AYLQPKNIICDNFNSSVLPVVSSKGESMAHYNIY 118 +L +D ++R + + L + +++ Sbjct: 596 DGDNGDELFRNADTAMYRAKDVGRNGFQFYSAEMNNRMRERLYLEQSLRNAIGLHQLSLW 655 Query: 119 YQPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHIN----KLF 174 YQP + +G++ + I ++ + D I + + + + Sbjct: 656 YQPKLDLASGSVKSAEALIRWRHPQLGMISP-GDFIPIAEETGLILPIGAWVIEEASRQL 714 Query: 175 SPIKNNLPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRR 234 + ++ + INI+ + + + + + G + L ++ + + + + Sbjct: 715 AKWRDQENQDIRVAINISAYQLSHGKLTDQVIQALDSLGLDPQSLTIEVTETAIMPQMDK 774 Query: 235 YQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATT 294 L+ +R + ++L+DFG GY+ L++L+ P + + ++ DI + + I T Sbjct: 775 AVCELQSLREMGIRVALDDFGTGYSSLTYLKRFPIDILKIDRSFVSDIADDEESGAIVKT 834 Query: 295 IIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLL 347 II+L+ L++ V+A+G+ET+ Q ++ G ++G PLP++ + L Sbjct: 835 IINLAHNLNMTVVAEGVETEAQLEFLRTNGCDEVQGYYFCKPLPSEECLEFLR 887 >UniRef50_Q07P60 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=12 Tax=Rhizobiales RepID=Q07P60_RHOP5 Length = 834 Score = 507 bits (1306), Expect = e-142, Method: Composition-based stats. Identities = 64/347 (18%), Positives = 141/347 (40%), Gaps = 4/347 (1%) Query: 3 TIKIKLNLIDYDSI-VNIEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIKT-VSCQK 60 + +L ++ + V++ P S+ ++ +L Y V+ + SI +S Sbjct: 478 NMVARLGGDEFAIVLVSVVSPNEASDFAARVIERLSVPYDVDGLEVVIGASIGIALSPGD 537 Query: 61 MKLYKKLNVKSDLTLWRDVFLRF-KAYLQPKNIICDNFNSSVLPVVSSKGESMAHYNIYY 119 + L +D+ L+R + K + + + + + +YY Sbjct: 538 GDNGEDLLRNADMALYRAKESGGGNHHFFEKEMDRQAQKRRDMEIDLRYAFAKGQFELYY 597 Query: 120 QPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINKLFSPIKN 179 QP+ + +AG + + ++ + + +D I + + L + + Sbjct: 598 QPLVDVARDRVAGFEALLRWRHPERGMISP-ADFIPVAEDIGLIVGLGEWVLRQACAEAA 656 Query: 180 NLPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSL 239 P I +N++P + ++ + + + G RL L+ + L ++L Sbjct: 657 TWPSEIKIAVNLSPVQFRSRNLVQAVIGALAQSGLSPRRLELEITESVFLAETEANLATL 716 Query: 240 RRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLS 299 ++R+ V +S++DFG GY+ LS+L++ PF + + ++ D+ I I L Sbjct: 717 HQMRDLGVRISMDDFGTGYSSLSYLRSFPFDKIKIDRSFVQDLAQRPDCLAIVRAIAGLG 776 Query: 300 KQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKL 346 + L+I A+G+ET+ Q ++ E G ++G S PA + Sbjct: 777 RSLNITTTAEGVETQAQLDWLREEGCNEVQGFLFSPARPAGEIAALI 823 >UniRef50_C6P6Y2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P6Y2_9PROT Length = 814 Score = 507 bits (1306), Expect = e-142, Method: Composition-based stats. Identities = 62/354 (17%), Positives = 134/354 (37%), Gaps = 10/354 (2%) Query: 1 MNTIKIKLNLIDYDSIVNIEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIKTVSCQK 60 + + + L D ++E + ++L+ L Y + R SI Sbjct: 459 LGGDEFVVMLEDLGG-HDLEAAAQTEAVGEKILAMLGLPYQLVAHEYRCTPSIGATLFSG 517 Query: 61 MKLY-KKLNVKSDLTLWRDVFLRFKAYLQPKNIICDNF-NSSVLPVVSSKGESMAHYNIY 118 +L ++L ++D+ +++ + D L K + ++ Sbjct: 518 HELAKEELLKRADIAMYQAKQAGRNTVRFFDQQMQDAVTARVALEGELHKALDRQQFRLH 577 Query: 119 YQPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINKLFSPIK 178 YQ + +G G + I + + D I + + + + Sbjct: 578 YQIQVD-ASGRPLGAEALIRWMHPERGLVPPD-QFIGMAEETDLILPIGQWVMDTACAQL 635 Query: 179 NNLPHG-----FFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIR 233 + +N++ D + ++ + L L+ + L I Sbjct: 636 KTWQQHAPTRDLVLAVNVSATQFHQLDFVFQVRATVQRHAIDPKLLKLELTESMLLENIE 695 Query: 234 RYQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIAT 293 ++ ++ V SL+DFG GY+ L +L+ +P + + ++ DI S+S I Sbjct: 696 DTIRTMNALKEIGVQFSLDDFGTGYSSLQYLKRLPLDQIKIDQSFVRDIASDSNDREIVG 755 Query: 294 TIIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLL 347 TII +++ L++DVIA+G+ET++Q ++ + G + +G P+P + F L Sbjct: 756 TIIAMAQNLYLDVIAEGVETEEQRQFLQDNGCTHFQGYLFGKPVPVEQFEAMLQ 809 >UniRef50_Q3SIW6 Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) n=2 Tax=Proteobacteria RepID=Q3SIW6_THIDA Length = 1212 Score = 506 bits (1305), Expect = e-142, Method: Composition-based stats. Identities = 55/356 (15%), Positives = 130/356 (36%), Gaps = 13/356 (3%) Query: 1 MNTIKIKLNLIDYDSIVNIEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIKT-VSCQ 59 + + + L + + + +LL L+ Y + + SI + Sbjct: 862 LGGDEFVVVLTEVG------DAAGAARVADKLLGALVPRYRIGGHALHTTASIGISLYPH 915 Query: 60 KMKLYKKLNVKSDLTLWRDVFLRFKAYLQPKNIICDN-FNSSVLPVVSSKGESMAHYNIY 118 L +D ++ + + + ++ Sbjct: 916 DGDDADALMKNADTAMYHAKSQGRDNVQFFTPEMNQSVLKRLQFDHDLRVAVEAGQFELH 975 Query: 119 YQPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHI----NKLF 174 YQP N+ +G + + + ++ + ++ I + L + + Sbjct: 976 YQPQINSTSGRVVKVEALVRWQHPREGLVSP-AEFIPIAEETGLILPLGEWVLNEACRQL 1034 Query: 175 SPIKNNLPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRR 234 ++ + +N++ + + + + G E L L+ + + Sbjct: 1035 RLWRDAGITDLTVAVNLSAHQLHSPALIPMVARTLGNHGLEGADLCLEITESVAMRDTTA 1094 Query: 235 YQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATT 294 + L+ +R+ ++LS++DFG GY+ LS+L+ +P + L ++ +IE N I Sbjct: 1095 SIAQLQALRDLGIHLSIDDFGTGYSSLSYLKLLPIDTLKLDQSFVCEIEFNPSDVAICAA 1154 Query: 295 IIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLLASL 350 I L+ L ++V+A+GIET+ Q + +++G S+PLPA+ + + Sbjct: 1155 TIALAHSLGLEVVAEGIETETQRRLLASHRCDFMQGYLFSAPLPAERALAYIREQQ 1210 >UniRef50_C7RNY7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RNY7_9PROT Length = 1003 Score = 506 bits (1305), Expect = e-142, Method: Composition-based stats. Identities = 62/356 (17%), Positives = 130/356 (36%), Gaps = 13/356 (3%) Query: 1 MNTIKIKLNLIDYDSIVNIEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIKT-VSCQ 59 + + + L D D++ I + L + + E SI + Sbjct: 617 LGGDEFTVVLPDVDTV------ETACLIAQRIQELLGRPTLIGEQEIAVTSSIGIALFPD 670 Query: 60 KMKLYKKLNVKSDLTLWRDVFLRFKA-YLQPKNIICDNFNSSVLPVVSSKGESMAHYNIY 118 L +D ++ L + + L KG + ++ Sbjct: 671 DGADAATLLKHADTAMYYAKEQGRNNWQLYDRTLTTRTTARLALEGDIRKGLERGEFRLF 730 Query: 119 YQPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHI----NKLF 174 YQP +A +G I G + I ++ + + I + + + + Sbjct: 731 YQPQVSADDGTIVGVEALIRWQHPQQGLVSP-ARFIPVAEESGLIVPIGEWVLTAACRQV 789 Query: 175 SPIKNNLPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRR 234 + + + +N++ + I G RL L+ + + + Sbjct: 790 RQWQQSGVPVPRVAVNVSARQLGAAGFLDTVAAIIVATGIAADRLELELTESILMDPEAK 849 Query: 235 YQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATT 294 L R+R V+ S++DFG GY+ LS+++ P + + ++ H + ++ I T Sbjct: 850 RIKGLSRLRAMGVHFSIDDFGTGYSSLSYIKRFPIGTLKIDQSFVHGLPQDADDAGITTA 909 Query: 295 IIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLLASL 350 II +++ L+++V+A+G+ET++Q ++ L+G S PLP D L Sbjct: 910 IISMARSLNLEVVAEGVETREQLAFLQRALCPKLQGYLFSYPLPPDEMEAILRRGR 965 >UniRef50_A1K4Z0 EAL/GGDEF/PAS/PAC-domain containing signalling protein n=2 Tax=Rhodocyclaceae RepID=A1K4Z0_AZOSB Length = 880 Score = 506 bits (1305), Expect = e-142, Method: Composition-based stats. Identities = 65/358 (18%), Positives = 132/358 (36%), Gaps = 13/358 (3%) Query: 2 NTIKIKLNLIDYDSIVNIEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIKT-VSCQK 60 + + L D +E I ++L+ L + + SI + Sbjct: 521 GGDEFVIVLPD------LEHGQDAGTIARKILAALTEPCRLGPHELTVTGSIGIALYPGD 574 Query: 61 MKLYKKLNVKSDLTLWRDVFLRFK-AYLQPKNIICDNFNSSVLPVVSSKGESMAHYNIYY 119 L +D ++R ++ + +L +Y+ Sbjct: 575 GADPSMLLRNADAAMYRAKADGRNGFQFYAADMNTHSLGELLLEHQLRGALDRNELRLYF 634 Query: 120 QPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINKLFSP--- 176 QP NA +G I GC+ + ++ D A + + + + + Sbjct: 635 QPKVNAADGCIEGCEALLRWQHPDLGLLAP-GRFVPAAEESGLIVPIGEWVLREACRQLR 693 Query: 177 -IKNNLPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRY 235 + + +N++ + DI + L L+ + + + R Sbjct: 694 AWIDAGLAPVPVAVNLSGQQFAHQDIVALVREALAEHRLPAPMLELELTETMLMRDLERT 753 Query: 236 QSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTI 295 ++L +R V L+++DFG GY+ L++L+ + + + ++ HDI S IAT + Sbjct: 754 IATLAELRAMGVTLAIDDFGTGYSSLAYLRQFDVNALKIDRSFVHDIRPGSSDGKIATAV 813 Query: 296 IDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLLASLKQV 353 I L+ L + V A+G+ET Q ++ G L+G P PA+AF ++L ++ Sbjct: 814 IALAHNLGLTVTAEGVETAAQQHFLARHGCDQLQGFLFGQPEPAEAFAQRLADDDRRA 871 >UniRef50_C4L987 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Tolumonas auensis DSM 9187 RepID=C4L987_TOLAT Length = 1098 Score = 506 bits (1304), Expect = e-142, Method: Composition-based stats. Identities = 62/360 (17%), Positives = 137/360 (38%), Gaps = 14/360 (3%) Query: 1 MNTIKIKLNLIDYDSIVNIEFPCLLSEIEIELLSQLLKGYSVNE-ISKRRNRSIKT-VSC 58 + + + L + S P +S + ++ L + + ++ SI + Sbjct: 731 LGGDEFTVLLQNNPS------PDDVSLLAERIIHALHQPFLLSNAREVMIGTSIGISLYP 784 Query: 59 QKMKLYKKLNVKSDLTLWRDVFLRFKAYLQPKN-IICDNFNSSVLPVVSSKGESMAHYNI 117 + ++L ++D ++R Y + L + + + + Sbjct: 785 EHGSTAEELMQQADTAMYRAKHDGRDGYRYFSEELFLKAKARLELEQRLHRAITGQEFKV 844 Query: 118 YYQPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHI----NKL 173 +YQP + K I G + + + + S+ I+ + + + + Sbjct: 845 FYQPQISIKTNQIIGAEALLRWDDPEYGLI-PPSEFISVAEETGLIQNIGEWVLYETCRQ 903 Query: 174 FSPIKNNLPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIR 233 + + +N++P + D+ + + G L L+ + + Sbjct: 904 GRDWLDQHLPPINLAVNLSPLQLHHGDVRQLIGTILHNSGFPAHHLELELTESALMEQQE 963 Query: 234 RYQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIAT 293 L+ +R + ++++DFG GY+ L++L+ P + + K DI IA Sbjct: 964 ETVKILQGLRQQGIRIAIDDFGTGYSSLAYLKQFPLDVLKIDKRFVEDIPHERDDMEIAA 1023 Query: 294 TIIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLLASLKQV 353 TI+ + L + V+A+G+ETK Q ++ ++G Y +G S PLPA+ F + L V Sbjct: 1024 TIVAMGHSLRLTVLAEGVETKAQLEFLEQQGCDYYQGYLYSMPLPAEEFAQLLSQQNPPV 1083 >UniRef50_A1STH5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Psychromonas ingrahamii 37 RepID=A1STH5_PSYIN Length = 962 Score = 506 bits (1304), Expect = e-142, Method: Composition-based stats. Identities = 57/345 (16%), Positives = 127/345 (36%), Gaps = 7/345 (2%) Query: 7 KLNLIDYDSIVNIEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIKT-VSCQKMKLYK 65 +L ++ + I L+ ++ K V SI + +K Sbjct: 598 RLGGDEFIMLFPNTDANAAMHIATTLIQEISKASVVEHNELTITPSIGIAIYPNDGNDFK 657 Query: 66 KLNVKSDLTLWRDVFLRFK-AYLQPKNIICDNFNSSVLPVVSSKGESMAHYNIYYQPIYN 124 L ++ ++R + + + L +YYQP + Sbjct: 658 TLLKNAETAMYRVKNDSRNGFHFVTPEMQLSASRNLQLENALRHALKRNELQLYYQPQIS 717 Query: 125 AKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINKLF-SPIKNNLPH 183 NG I G + + + + + ++ I + ++ + + + KN + Sbjct: 718 TSNGQIIGAEALLRWHHPELGMISP-AEFIPIAESSGQIIEIGEWVLRTAIRQTKNWMDD 776 Query: 184 GFF---ITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSLR 240 GF I +N++ ++ + L L+ + ++ + + Sbjct: 777 GFTPMIIAVNLSVVQFRQKNLLTLITDILAEVQLPNEYLELELTEAVTMHDPESVINVMN 836 Query: 241 RIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSK 300 + +S++DFG GY+ LS+L+ + + ++ DI ++ I + IID++ Sbjct: 837 TFHEQGIRMSIDDFGTGYSSLSYLKKFKVYKLKIDQSFIRDISNDPDDRAIVSAIIDMAS 896 Query: 301 QLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRK 345 L + IA+G+ET +Q ++ G ++G S PLP+ F + Sbjct: 897 NLGLQTIAEGVETAEQLAFLRLHGCHEVQGYYFSKPLPSVEFEQF 941 >UniRef50_C6X9G9 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6X9G9_METSD Length = 984 Score = 506 bits (1304), Expect = e-142, Method: Composition-based stats. Identities = 62/351 (17%), Positives = 142/351 (40%), Gaps = 8/351 (2%) Query: 7 KLNLIDYDSIVN-IEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIKT-VSCQKMKLY 64 +L ++ +++ + +++ +++S L + ++ + S+ V Sbjct: 630 RLGGDEFIVMMDVLREREDAAKVAKKIISSLQNEFLIDGRELFISASVGISVYPDDSLDV 689 Query: 65 KKLNVKSDLTLWRDVFLRFKAYLQPKNIICD-NFNSSVLPVVSSKGESMAHYNIYYQPIY 123 L +D+ +++ + + L + + + +YYQ Sbjct: 690 DGLIKAADIAMYQVKNKGKNNHCFYSADLSQNAVERFTLENQLRRALARDQFEVYYQAQV 749 Query: 124 NAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINKL-FSPIKNNLP 182 + + G I G + I + + + + I + + + + +K Sbjct: 750 SLETGRIIGAESLIRWIHPELGVVSP-AKFIPLAEETGLIIPIGEWVLRQSAMQVKEWHD 808 Query: 183 HGF---FITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSL 239 GF ++++N++ I + + E L L+ + ++ Sbjct: 809 QGFDIDWVSVNVSGVQIQRSNFADTVYGILVETDCESHLLELEITESTVMHNTEYVIDVF 868 Query: 240 RRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLS 299 RI++ V L+++DFG GY+ LSHL+ +P + + ++ D+ +NS IAT I ++ Sbjct: 869 DRIKHLGVRLAIDDFGTGYSSLSHLKRLPLDKIKIDQSFVRDLPNNSDDAAIATAINAMA 928 Query: 300 KQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLLASL 350 + L VIA+G+ET++QA ++ + G + +G S P+ A F L A Sbjct: 929 QSLGFTVIAEGVETRQQASFLKKIGCQQGQGYLYSRPVTASEFTALLRAEQ 979 >UniRef50_Q0EWZ7 Putative uncharacterized protein n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0EWZ7_9PROT Length = 1217 Score = 505 bits (1303), Expect = e-142, Method: Composition-based stats. Identities = 60/355 (16%), Positives = 127/355 (35%), Gaps = 14/355 (3%) Query: 2 NTIKIKLNLIDYDSIVNIEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIKT-VSCQK 60 + + L D + IE I ++L + ++V++ SI + Sbjct: 861 GGDEFIILLGDVGDLAAIEI------IVQKILDAFSEPFTVDDHIVSVTSSIGISIFPND 914 Query: 61 MKLYKKLNVKSDLTLWRDVFLRFKAYLQPKN-IICDNFNSSVLPVVSSKGESMAHYNIYY 119 + + +L +S+ L + Y + + L + IYY Sbjct: 915 GRDFNRLISQSEAALQKAKAAGKDTYNFFTEQMNINALEHMQLQGQLRHAIINQEFRIYY 974 Query: 120 QPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINKLFSPIKN 179 QP + N + G + + ++ I + L + Sbjct: 975 QPQIDTLNERMIGAEALVRWQHPQHGLV-PPLKFIPLAERSGLIIPLGEWVLNEACRQAQ 1033 Query: 180 NL-----PHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRR 234 + +N++ +I + ++ G L L+ + L + Sbjct: 1034 VWRKRNRMPSMVMAVNLSAVQFKRGNIVETVIQALERSGLPAENLELELTESILLDDVEV 1093 Query: 235 YQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATT 294 +L R+++ + LS++DFG GY+ LS+L+ + + + ++ D+ + I + Sbjct: 1094 VMETLHRLKDIGIKLSIDDFGTGYSSLSYLKRLAVDKLKIDQSFVRDMVVDPEDAAIVSA 1153 Query: 295 IIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLLAS 349 II L L + VIA+G+ET+ Q + ++G S P+PA+ F + Sbjct: 1154 IIQLGHTLQLTVIAEGVETRAQLQLLKSLECNEVQGYLFSRPIPAEDFSGLFEQA 1208 >UniRef50_B2JCW5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=7 Tax=Bacteria RepID=B2JCW5_BURP8 Length = 1040 Score = 505 bits (1303), Expect = e-142, Method: Composition-based stats. Identities = 58/357 (16%), Positives = 134/357 (37%), Gaps = 13/357 (3%) Query: 2 NTIKIKLNLIDYDSIVNIEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIK-TVSCQK 60 + + + + L + + + + ++ S+ ++ Q Sbjct: 683 GGDEFVIV------MTDTVDEQSLIAWMERVRASISEPVWLDGTELYVGCSMGASLFPQD 736 Query: 61 MKLYKKLNVKSDLTLWRDVFLRFKAYLQPK-NIICDNFNSSVLPVVSSKGESMAHYNIYY 119 + L K+DL ++R + + + + L + + ++Y Sbjct: 737 GDDAETLMKKADLAMYRAKDMGRNTFQFYQPEMNVSAGARLNLERRLRRALRDNEFLLHY 796 Query: 120 QPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINKLFSP--- 176 QP + + G + G + + + + S I + L + + Sbjct: 797 QPQVDIETGQVVGMEALVRWHDPEVGLI-PPSQFIPVAEESGLIGPLSEWVLREACRQNK 855 Query: 177 -IKNNLPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRY 235 ++ +++N++ DI + + ++ G + L L+ + + Sbjct: 856 AWQDEGLPPARVSVNLSARQFQQRDIAKLVMQVLEETGLDPQYLELELTESTIMRNAEEA 915 Query: 236 QSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTI 295 S L + + L+++DFG GY+ LS+L+ P + + ++ DI +S + I + I Sbjct: 916 VSMLNELHALGIGLAIDDFGTGYSSLSYLKRFPVDRLKIDRSFVSDIGESSDDETITSAI 975 Query: 296 IDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLLASLKQ 352 I L+ L++ VIA+G+ET Q ++ ER ++G + PLP A L + Sbjct: 976 IALAHSLNLQVIAEGVETSTQLDFLKERACDEMQGYFFAKPLPHHAIPGMLQRGSQS 1032 >UniRef50_Q74FR9 Sensory box/GGDEF family protein n=1 Tax=Geobacter sulfurreducens RepID=Q74FR9_GEOSL Length = 682 Score = 505 bits (1303), Expect = e-142, Method: Composition-based stats. Identities = 52/356 (14%), Positives = 128/356 (35%), Gaps = 13/356 (3%) Query: 1 MNTIKIKLNLIDYDSIVNIEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIKT-VSCQ 59 + + + + L + + +++ +L + + SI + Sbjct: 320 LGSDEFVVILPGVG------HEEDVVAVVRKIVEELNRPIVIQGNDIFCTASIGIAIYPT 373 Query: 60 KMKLYKKLNVKSDLTLWRDVFLRFKAYL-QPKNIICDNFNSSVLPVVSSKGESMAHYNIY 118 L +D+ + + Y + L + + ++ Sbjct: 374 DGSSADILLKNADMAMHKAKEFGGDGYQFYSSELNHRAMERLTLETSLRRALERREFLLH 433 Query: 119 YQPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINKLFSPIK 178 YQP+ +G I G + + + + + + I + + + + Sbjct: 434 YQPLLGIGSGRIVGVEALLRWDSPELGMVSP-ARFIPLAEETGLIVPIGEWVLRSACEQL 492 Query: 179 NNLPH----GFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRR 234 L +++N++ + G + L L+ + + Sbjct: 493 RALHELGYTELCVSVNVSARQFRHDGFCAMVAAVLAAVGLDPRYLELELTESVIMERSET 552 Query: 235 YQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATT 294 + LR+++ V L+++DFG GY+ LS+L++ P + + +T ++ + IA Sbjct: 553 AKGILRKLKQMGVSLAIDDFGTGYSSLSYLKHFPIDRLKIDRTFVKEVTVDQDNAAIAEA 612 Query: 295 IIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLLASL 350 I+ L+ L++DV+A+G+ET +Q ++ ++G ++ PLP + L A Sbjct: 613 IVALAHVLNLDVVAEGVETAEQLAFLAALRCDVVQGYHIARPLPPRNLLEFLEARQ 668 >UniRef50_A1W8G6 Diguanylate cyclase/phosphodiesterase n=7 Tax=Comamonadaceae RepID=A1W8G6_ACISJ Length = 756 Score = 505 bits (1302), Expect = e-142, Method: Composition-based stats. Identities = 49/354 (13%), Positives = 132/354 (37%), Gaps = 7/354 (1%) Query: 3 TIKIKLNLIDYDSIVNIEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIKT-VSCQKM 61 +L ++ ++ + + ++ L+ + S+ + + Sbjct: 403 DTVARLGGDEFVLLLPGANAQGAARVAAKMQEAALQPVHIQHHELSLALSMGIALFPEHG 462 Query: 62 KLYKKLNVKSDLTLWRDVFLRFKAYLQPKN-IICDNFNSSVLPVVSSKGESMAHYNIYYQ 120 ++ L +D ++R ++ + + + L + +++YQ Sbjct: 463 SDFETLIQSADTAMYRAKADGRNSFRFFTPTMQAQSARALQLTNALRRALERNQLSLHYQ 522 Query: 121 PIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINK----LFSP 176 P + G + G + + + + A + ++ I + ++ + + + Sbjct: 523 PQVSIATGRVCGVEALLRWHHPELGAVSP-AEFIPVAEDTGQILPIGEWVLRTALAQLRT 581 Query: 177 IKNNLPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQ 236 + + +N++ + + +G + L L+ + + Sbjct: 582 WHSQGLPALTMAVNLSAVQFRQPQLLELVDRLLAEYGVQPHLLELELTENVAVADPHAAI 641 Query: 237 SSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTII 296 +++ ++ V LS++DFG GY+ LSHL+ + + ++ D++ + I + II Sbjct: 642 ATMDQLHAKGVRLSMDDFGTGYSSLSHLKRFQIYRLKIDQSFVRDLDHDGNDRAIVSAII 701 Query: 297 DLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLLASL 350 +++ L + A+G+ET Q ++ E+G +G S PL A + LL Sbjct: 702 RMAQALGMRTTAEGVETAHQLTFLREQGCDEAQGFYFSRPLGAPHLQQYLLQRP 755 >UniRef50_Q47GC0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Betaproteobacteria RepID=Q47GC0_DECAR Length = 862 Score = 505 bits (1302), Expect = e-141, Method: Composition-based stats. Identities = 59/357 (16%), Positives = 142/357 (39%), Gaps = 11/357 (3%) Query: 1 MNTIKIKLNLIDYDSIVNIEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIKTVSCQK 60 + + + L + ++ + E + ++L+ L + Y + ++ + SI + Sbjct: 475 LGGDEFVVVLANLNT-NDKEAAQDTETVAEKILATLNQTYQLGHVTHHSSASIGATLFKG 533 Query: 61 MKLY-KKLNVKSDLTLWRDVFLRFKAYLQPKNIICDNFN-SSVLPVVSSKGESMAHYNIY 118 + L ++DL++++ A + + + + + + ++ Sbjct: 534 PLIPIDDLMKQADLSMYKAKAAGRNAVRFFDPSMEIAVKVRAEMEDDLLRALAEKQFLLH 593 Query: 119 YQPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINKLFSPIK 178 YQ + G +V + ++ + ++ I + L + + Sbjct: 594 YQAQM--VGERLTGAEVLLRWQHPQRGMVSP-AEFIPLAEETGLILPLGHWVLETACTQL 650 Query: 179 NNLP-----HGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIR 233 + +N++ D + L ++ G RL L+ + + + Sbjct: 651 AQWAGRPEVAHLTLAVNVSAHQFRQNDFVDQVLGVLEKTGANPQRLKLELTESLLVENVE 710 Query: 234 RYQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIAT 293 + +++ V SL+DFG GY+ LS+L+ +P ++ + ++ D+ ++S IA Sbjct: 711 DIIDKMAALKHRGVGFSLDDFGTGYSSLSYLKRLPLDHLKIDQSFVRDVLTDSNDASIAR 770 Query: 294 TIIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLLASL 350 TI+ L+ L + VIA+G+ET+ Q ++ G +G S PLP + F L ++ Sbjct: 771 TIVALANSLGLGVIAEGVETEAQRDFLASSGCHTYQGYYFSRPLPIEDFESFTLTAI 827 >UniRef50_C5T1I4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T1I4_ACIDE Length = 830 Score = 505 bits (1302), Expect = e-141, Method: Composition-based stats. Identities = 58/352 (16%), Positives = 132/352 (37%), Gaps = 10/352 (2%) Query: 2 NTIKIKLNLIDYDSIVNIEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIKTVSCQKM 61 + + L + E + +LL+ L + +++ SI Sbjct: 478 GGDEFVVMLETLRPELT-EAASQAEIVAEKLLASLNQPFALGGQQHYSTPSIGITLFGDE 536 Query: 62 K-LYKKLNVKSDLTLWRDVFLRFKAYLQPKNIICDNFN-SSVLPVVSSKGESMAHYNIYY 119 + +L ++DL +++ + N S L +G + +YY Sbjct: 537 RLSVDELLKRADLAMYQAKGAGRNTQRFFDPDMQAAVNARSNLEADLRQGLARGELCVYY 596 Query: 120 QPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINKLFSPIKN 179 QP+ + + G + + ++ + +D I + L + + Sbjct: 597 QPVVD-HRARLLGVEALVRWRHPVRGMISP-ADFIPLAEQTGLILPLGQQVLQTACGQLQ 654 Query: 180 NLPH-----GFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRR 234 +++N++ E L ++ G + +L L+ + L + Sbjct: 655 RWGERKQTRHLSVSVNVSARQFRQPGFVAEVLQTLQGCGADPRKLKLELTESLLLGDVED 714 Query: 235 YQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATT 294 + + +++ V +L+DFG GY+ LS+L+ +P V + + D+ ++ I T Sbjct: 715 TIARMEQLKREGVGFALDDFGTGYSSLSYLKRLPLDQVKIDQGFVRDVLTDPNDAAIVRT 774 Query: 295 IIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKL 346 I+ L++ L ++V+A+G+ET Q ++ G + +G P P + L Sbjct: 775 ILALAQSLDLEVVAEGVETTGQLAFLRLHGCEGFQGYLFGRPGPVEDIDAYL 826 >UniRef50_C0Z6C0 Probable signaling protein n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0Z6C0_BREBN Length = 708 Score = 505 bits (1301), Expect = e-141, Method: Composition-based stats. Identities = 64/356 (17%), Positives = 142/356 (39%), Gaps = 8/356 (2%) Query: 2 NTIKIKLNLIDYDSIVN-IEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIKT-VSCQ 59 + +L ++ + N + +E+ +++ QL + + ++ + SI + Q Sbjct: 355 GDVVARLGGDEFTIMQNQLLDRNEATELAEQIMYQLQRPFELDGHVFNVSCSIGIALYPQ 414 Query: 60 KMKLYKKLNVKSDLTLWRDVFLRFKAYLQPK-NIICDNFNSSVLPVVSSKGESMAHYNIY 118 + L ++D L+ Y ++ + ++ K + IY Sbjct: 415 DGDNPEDLLKRADTALYTVKSRGKNGYDFFDPSMEAKSLERILMENEMRKAIEQEQFQIY 474 Query: 119 YQPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINKLFSPIK 178 YQP + + G + + + + + I + L I K Sbjct: 475 YQPKIDIATSAMTGMEALVRWVHPELGII-PPNRFIPIAEETGMILALGEWILKQACKQN 533 Query: 179 NNLPHG---FFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRY 235 N +++N++ I D+ ++ L L+ + + + Sbjct: 534 KNWHDQGYTLKVSVNLSARQIYQKDLVEMIKDILQETKLSPHWLELEITESIFVK-MEEA 592 Query: 236 QSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTI 295 + L++IR+ + +S++DFG GY+ S+++++P + + + DI N + I I Sbjct: 593 TAVLQQIRDIGIQISIDDFGTGYSSFSYIKSLPVDTIKIDASFIRDIHHNQESQAIVKAI 652 Query: 296 IDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLLASLK 351 + +++ L+++VIA+GIE Q + E G + +G S PLP D F + L L+ Sbjct: 653 VTIAQSLNMNVIAEGIELHDQVAALKENGCDHGQGYLFSKPLPTDDFDQLLRQELQ 708 >UniRef50_Q3A1F4 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A1F4_PELCD Length = 703 Score = 504 bits (1300), Expect = e-141, Method: Composition-based stats. Identities = 54/358 (15%), Positives = 130/358 (36%), Gaps = 8/358 (2%) Query: 2 NTIKIKLNLIDYD-SIVNIEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIKT-VSCQ 59 + +L ++ I ++ S + ++L L + + E + + + Sbjct: 340 EDVLARLGSDEFAAVIASVGSQDEFSVLAQKMLHCLTEPIQIGEQKLYCSGGMGIALFPV 399 Query: 60 KMKLYKKLNVKSDLTLWRDVFLRFKAYLQP-KNIICDNFNSSVLPVVSSKGESMAHYNIY 118 + L + + + + K + + + + + ++ Sbjct: 400 DGVDAEALLKNAATAMHQAKQHGSNNFRFFSKGMNRMAWERIEIETGLRRALDLQQLALH 459 Query: 119 YQPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHI----NKLF 174 YQP + K G+I G + + ++ + + I + + + + Sbjct: 460 YQPQVDLKTGHIIGMEALLRWESPELGRVSP-MRFIPLAEETGLILPIGNWVLESACRQA 518 Query: 175 SPIKNNLPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRR 234 + +NI+ I+ G L ++ + + Sbjct: 519 KAWHRAGFPSLRMAVNISARQFKQAGFIDRLDAIIQRSGINPELLEMELTESLIMEKSDE 578 Query: 235 YQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATT 294 +L I++ + L+++DFG GY+ LS+L++ P + + ++ DI N+ I Sbjct: 579 TLMTLVDIKSRGIKLAIDDFGTGYSMLSYLKHFPIDRIKVDRSFVRDIPENTDDAAITEA 638 Query: 295 IIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLLASLKQ 352 II ++ L I+VIA+GIET++Q ++ +R + +G P+P + L + Sbjct: 639 IIAMAHSLKIEVIAEGIETREQLAFLKDRACEEGQGYYFGRPVPVETAAEILAQQYPR 696 >UniRef50_C6D7W4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Bacteria RepID=C6D7W4_PAESJ Length = 1095 Score = 504 bits (1300), Expect = e-141, Method: Composition-based stats. Identities = 66/357 (18%), Positives = 133/357 (37%), Gaps = 15/357 (4%) Query: 1 MNTIKIKLNLIDYDSIVNIEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIKT-VSCQ 59 M + + L +I E+ ++ + + + + + SI + Sbjct: 586 MGGDEFTVILP------HIRDNNSAIEVARRIIERTREPFYIEDYELFITTSIGISIYPN 639 Query: 60 KMKLYKKLNVKSDLTLWRDVFLRFKAYL-QPKNIICDNFNSSVLPVVSSKGESMAHYNIY 118 L +D L+R L Y ++ + L K +Y Sbjct: 640 DGDDSSTLMKNADSALFRAKDLGKNGYQIFTSSMNVQTYKVFTLEKDLRKAIQRDELEMY 699 Query: 119 YQPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHI----NKLF 174 YQP N G I G + I + + + ++ I + + L + + Sbjct: 700 YQPKVNIHTGEIVGAEALIRWNHPEWGLVSP-NEFIPISEETGLILSLGNWVKRTVCRQN 758 Query: 175 SPIKNNLPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRR 234 + I+IN+ + L+ D + G E L ++ + L Sbjct: 759 KEWQLAGLKPIPISINVTAKRFLSKDFMDAIQQILAETGLEPHYLEIEITESSLLENAET 818 Query: 235 YQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIP--FSYVNLHKTMFHDIESNSLTDIIA 292 +L + V +SL+DFG GY+ LS+L+ + + + ++ HD+ S + I Sbjct: 819 VMHTLDSLNKLGVTISLDDFGTGYSSLSYLKRFKHTINILKIDRSFIHDLHQGSDDNAII 878 Query: 293 TTIIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLLAS 349 + II L++ +++ V+A+G+ET +Q + ++G S P+ A+AF + L Sbjct: 879 SAIIQLAQHMNMSVVAEGVETGEQLHILKLLKCDLVQGYLFSRPVQAEAFAQLLKRG 935 >UniRef50_B0UQT2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Methylobacterium RepID=B0UQT2_METS4 Length = 797 Score = 504 bits (1300), Expect = e-141, Method: Composition-based stats. Identities = 56/350 (16%), Positives = 126/350 (36%), Gaps = 3/350 (0%) Query: 1 MNTIKIKLNLIDYDSIVNIEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIKT-VSCQ 59 + + + L + + L + + ++ SI ++ Q Sbjct: 443 LGGDEFAILLAGAGDAAGAGDLAAIQAAAERAIEILSRPFVIDGHILDIGASIGIALAPQ 502 Query: 60 KMKLYKKLNVKSDLTLWRDVFLRF-KAYLQPKNIICDNFNSSVLPVVSSKGESMAHYNIY 118 ++L +DL L+ + + + L + + + + +Y Sbjct: 503 DGDTPEQLLRSADLALYGAKEEGRGRFRMFEGTMNARMQARRSLELDLRRALARQEFELY 562 Query: 119 YQPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINKLFSPIK 178 +QP +A+ G G + I + + + + I + L + + Sbjct: 563 FQPQVDARTGRFDGAEALIRWHHPERGLVSP-GEFIPLAEETGLIGPLGEWVLRTACAEA 621 Query: 179 NNLPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSS 238 + +N++P + + G RL ++ + + R + Sbjct: 622 RRWATPLPVAVNLSPVQFRDPRLAATVRGILAETGLPGSRLEIEITEGTLMQDEHRTLAV 681 Query: 239 LRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDL 298 L +R + +S++DFG GY+ LS+L+ PF + + ++ + + I I L Sbjct: 682 LTELRGLGIRISMDDFGTGYSSLSYLRRFPFDKIKIDQSFVRQTPQDRDSVAIVRAIAML 741 Query: 299 SKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLLA 348 + L I A+G+ET +Q+ ++ G L+G S P+PA++ A Sbjct: 742 GRSLGIKTTAEGVETDQQSVFIAGEGCDQLQGYLYSRPVPAESIAELFRA 791 >UniRef50_Q3A628 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A628_PELCD Length = 1063 Score = 504 bits (1300), Expect = e-141, Method: Composition-based stats. Identities = 55/355 (15%), Positives = 129/355 (36%), Gaps = 14/355 (3%) Query: 2 NTIKIKLNLIDYDSIVNIEFPCLLSEIEIELLSQLLK-GYSVNEISKRRNRSIKT-VSCQ 59 + L L D D I N + ++ L + ++ +E SI + Q Sbjct: 707 GGDEFVLLLTDLDDIQNTTSAT------EKFMALLTERPFATSECDINTTASIGIALYPQ 760 Query: 60 KMKLYKKLNVKSDLTLWRDVFLRFKAYLQPK-NIICDNFNSSVLPVVSSKGESMAHYNIY 118 + + L ++D ++ Y + + + + Sbjct: 761 DGQDPETLLKRADTAMYEAKKNGRNGYHFFSLQLAEQAERRHRMEINLRSALKEGEMQLV 820 Query: 119 YQPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINKLFSP-- 176 YQP + I G + + ++ + + + I + L + + Sbjct: 821 YQPQIDLGKVRITGMEALLRWQSPEEGTISP-ARFIPLAEETGLIYPLGEWVLQQACRQG 879 Query: 177 --IKNNLPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRR 234 + + +N++ + D+ + ++ G L L+ + L + Sbjct: 880 AIWQKTEASPLCVAVNLSAKQFHQPDLAKNIKKILRETGLSPHLLELEITESVFLENMEA 939 Query: 235 YQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATT 294 +L ++ V S++DFG GY+ LS+L+ +P + + + DI+++ I Sbjct: 940 AIEALTELKKLGVQFSIDDFGTGYSSLSYLKKLPIDRIKIAQEFVRDIDTDDGDKAIIKA 999 Query: 295 IIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLLAS 349 I ++K L + +IA+G+E +Q +++ G ++G + P+PA + + Sbjct: 1000 TIAMAKSLGMKLIAEGVENHQQLAFLLLHGCHAMQGYYFAKPMPAQEVPSFIHSE 1054 >UniRef50_B2T9B2 Diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(S) n=2 Tax=Burkholderiales RepID=B2T9B2_BURPP Length = 1037 Score = 504 bits (1299), Expect = e-141, Method: Composition-based stats. Identities = 62/353 (17%), Positives = 132/353 (37%), Gaps = 11/353 (3%) Query: 1 MNTIKIKLNLIDYDSIVNIEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIK-TVSCQ 59 + + + L + E + +L+ L Y + +I R + SI TV Sbjct: 676 VGGDEFVVVLGNL-HKNRQEAANQTEAVGERILAVLGSPYHLGKIEYRTSASIGATVFRG 734 Query: 60 KMKLYKKLNVKSDLTLWRDVFLRFKAYLQPK-NIICDNFNSSVLPVVSSKGESMAHYNIY 118 +L ++DL +++ A ++ + L + ++ Sbjct: 735 HQASIDELLKQADLAMYKSKERGRNAVRFFDPDMQTVVVQRAALEAGLRNAIEDNQFLLH 794 Query: 119 YQPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINKLFSPIK 178 YQ + G + + ++ ++ I + L + + Sbjct: 795 YQAQV-VGT-RVTGAEALVRWQHPQRG-IVPPAEFIPLAEETGLIVALGSWVLEAACAQL 851 Query: 179 NNL-----PHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIR 233 I +N++ + D L I G RL L+ + + ++ Sbjct: 852 ARWAARPDMAHLTIAVNVSVQQFRKADFVDNVLTIIGRTGARPDRLKLELTESVLVDNVQ 911 Query: 234 RYQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIAT 293 + ++ + +L+DFG+GY+ LS+L+ +P + + ++ D+ +S +IA Sbjct: 912 DIIEKMSALKAKGIVFALDDFGIGYSSLSYLKRLPLDQLKIDRSFVRDVLVDSNDAVIAR 971 Query: 294 TIIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKL 346 TI+ L++ L + VIA+G+ET+ Q ++ G +G PLP + F L Sbjct: 972 TIVALARSLGLGVIAEGVETEAQRDFLAAAGCYAYQGYYFCRPLPIEDFEALL 1024 >UniRef50_C1DJP1 Cyclic di-GMP signal transduction protein n=1 Tax=Azotobacter vinelandii DJ RepID=C1DJP1_AZOVD Length = 1104 Score = 504 bits (1299), Expect = e-141, Method: Composition-based stats. Identities = 60/355 (16%), Positives = 145/355 (40%), Gaps = 8/355 (2%) Query: 2 NTIKIKLNLIDYDSI-VNIEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIK-TVSCQ 59 +L ++ + ++E P + +++ L V E + SI ++ + Sbjct: 747 GDTVARLGGDEFLILLADLEQPADADAVARKIVGSLDCPIVVQERKIHLSGSIGVSLFPR 806 Query: 60 KMKLYKKLNVKSDLTLWRDVFLRFKAYLQP-KNIICDNFNSSVLPVVSSKGESMAHYNIY 118 + +L +D+ ++R L Y + + + L + + + Sbjct: 807 DGETADELIDNADMAMYRAKELGRNTYQFFTRAMSLETQRRVDLEIKLRGAATAGQLQLV 866 Query: 119 YQPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINKLFS--- 175 YQP + +NG I+GC+ + + + + + I + + + + + Sbjct: 867 YQPKVSLENGGISGCEALLRWHHPELGIVSPE-HFIPIAEDSGLIVPIGDWVLRTACMQA 925 Query: 176 -PIKNNLPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRR 234 + + +N++ L D+ ++ G RL L+ + I + Sbjct: 926 RAWMDAGLPPVCVAVNVSTRQFLQQDVVAWVTRTLRETGLPAARLELELTESLIARDIEK 985 Query: 235 YQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATT 294 +++ ++++ V LS++DFG GY+ L++L+ + + ++ ++ + + I Sbjct: 986 VTATIDQLKDIGVKLSIDDFGTGYSSLNYLKRFRVDTLKIDQSFVRNMLTEMEDETIVLA 1045 Query: 295 IIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLLAS 349 +I L+ L VIA+G+ET++ + ++ G ++G S P+ A+AF L A Sbjct: 1046 VIALAHNLKFKVIAEGVETEQHSRFLCSNGCDEIQGHYFSEPVTAEAFETMLRAG 1100 >UniRef50_Q47IA0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q47IA0_DECAR Length = 925 Score = 504 bits (1299), Expect = e-141, Method: Composition-based stats. Identities = 61/356 (17%), Positives = 142/356 (39%), Gaps = 13/356 (3%) Query: 1 MNTIKIKLNLIDYDSIVNIEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIKT-VSCQ 59 + + + L S P + + ++ ++ Y + R + SI V Sbjct: 551 LGGDEFVIALPGIGS------PADAAHLADDITREISAPYLIKGQELRTSPSIGICVYPG 604 Query: 60 KMKLYKKLNVKSDLTLWRDVFLRFKAYLQP-KNIICDNFNSSVLPVVSSKGESMAHYNIY 118 L +D+ ++ Y +++ L + + ++ Sbjct: 605 DGSEIGDLLKNADVAMYHAKANGRGNYQFFTEDMNIATTERMCLESDLRLAITRREFLLH 664 Query: 119 YQPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINKLFSP-- 176 YQP + ++G I G + I ++ + +D I ++ + + + Sbjct: 665 YQPQLDLRSGTIVGVEALIRWQHPTRGLVSP-ADFIPIAEESGMIAAIGDWVLEEACRQL 723 Query: 177 --IKNNLPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRR 234 +N ++IN++ L + + RL L+ + + Sbjct: 724 KVWQNRGITHLRMSINLSAGQFLDKTLPARIHELLAANDLSADRLDLEVTESMSMASPDE 783 Query: 235 YQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATT 294 S ++ + ++ + LS++DFG GY+ L++L+ +P + + ++ DIES+ I Sbjct: 784 SISVMKTLSSSGLTLSIDDFGTGYSSLAYLKLLPIHTLKIDRSFVKDIESDPNDADICDV 843 Query: 295 IIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLLASL 350 + L+ +L ++V+A+G+ET+ Q +++ G + ++G +S PLPAD R + + Sbjct: 844 TVLLAHKLGLEVVAEGVETEAQLKFLLSIGCEKVQGYLISKPLPADQAERFIRNNP 899 >UniRef50_A4G3M6 Putative two-component response regulator n=1 Tax=Herminiimonas arsenicoxydans RepID=A4G3M6_HERAR Length = 818 Score = 504 bits (1299), Expect = e-141, Method: Composition-based stats. Identities = 60/355 (16%), Positives = 130/355 (36%), Gaps = 13/355 (3%) Query: 1 MNTIKIKLNLIDYDSIVNIEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIKTV-SCQ 59 + + L L N + + + ++L+K + S+ + Sbjct: 467 IGGDEFVLLL------TNQSVSDSNAGVMQRIQAELIKPMWIRGQEIVVTCSMGVARFPE 520 Query: 60 KMKLYKKLNVKSDLTLWRDVFLRFK-AYLQPKNIICDNFNSSVLPVVSSKGESMAHYNIY 118 + + L +D ++R K + + L + Sbjct: 521 DGEDSESLLANADTAMYRAKSSGRNNFQFYTKEMNATSGERLSLESDLWHALKNDELFLV 580 Query: 119 YQPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINKLFS--- 175 YQP + ++G + G + I ++ A D I + + + + + Sbjct: 581 YQPQIDLRDGTVIGMEALIRWQHPKRGLIAP-MDFIPMAECNGLIIPIGIWVLETACRHN 639 Query: 176 -PIKNNLPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRR 234 ++ + IN++ + + I+ G + L L+ + ++ + Sbjct: 640 LQLQKEGLPPIRVAINLSARQLSDRNFVESVQSVIEAIGLDPHYLELEVTESMVMHNVED 699 Query: 235 YQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATT 294 +L + + LSL+DFG G++ L++L+ P + + ++ + +S+ IIA T Sbjct: 700 VVVTLNDLNKMGIQLSLDDFGTGFSSLAYLKRFPIDRLKIDQSFIFNCDSDPGDAIIAQT 759 Query: 295 IIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLLAS 349 II L+ L I VIA+G+E + ++ + G +G +S PL D LL Sbjct: 760 IIALAHGLKIKVIAEGVEKSEHLSFLKKNGCDEGQGYFISRPLTFDDLRMFLLTG 814 >UniRef50_Q2RPL3 Diguanylate cyclase/phosphodiesterase n=1 Tax=Rhodospirillum rubrum ATCC 11170 RepID=Q2RPL3_RHORT Length = 855 Score = 504 bits (1299), Expect = e-141, Method: Composition-based stats. Identities = 56/359 (15%), Positives = 131/359 (36%), Gaps = 14/359 (3%) Query: 1 MNTIKIKLNLIDYDSIVNIEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIKTVS-CQ 59 + + + L N+E + I ++L L + + + S+ Sbjct: 491 LGGDEFIVILS------NVEDQHAGAYIAEKILYSLSEPFPIGGTEVFCIPSVGITYFPD 544 Query: 60 KMKLYKKLNVKSDLTLWRDVFLR-FKAYLQPKNIICDNFNSSVLPVVSSKGESMAHYNIY 118 + L +D+ ++ + + ++ + + + + ++ Sbjct: 545 HGETAPDLLRNADVAMYHAKQGGERRYAIFTPDMARRSLALLTMESDLRHALARDEFELH 604 Query: 119 YQPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINKLFSP-- 176 +QP + + G + I ++ + D I + + + Sbjct: 605 FQPKVR-ADLTLIGAEALIRWRHPEKGLINP-GDFIPLAEESGLILPIGRWTLREACDRV 662 Query: 177 --IKNNLPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRR 234 + +++N++P + + G E L L+ + + Sbjct: 663 MSWRAEGLTIPSVSVNVSPRQFQDQTLVETVRQILVETGLEPEALDLEITETVMTGDVEH 722 Query: 235 YQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATT 294 +LR +++ V LS++DFG GY+ L++L+ P + + +T D+ + I +T Sbjct: 723 AVGTLRALKDLGVTLSIDDFGTGYSSLNYLKTFPIDTLKIDQTFVRDVLHSGKDAAIVST 782 Query: 295 IIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLLASLKQV 353 II L++ L V+A+G+E +QA ++ R + +G S PLP F L + + Sbjct: 783 IIALARNLGFSVVAEGVEEIEQAEFLGSRDCQNFQGFLYSRPLPPAEFTTFLRTAKLET 841 >UniRef50_A6VW49 Diguanylate cyclase/phosphodiesterase n=2 Tax=Marinomonas RepID=A6VW49_MARMS Length = 659 Score = 503 bits (1298), Expect = e-141, Method: Composition-based stats. Identities = 63/355 (17%), Positives = 133/355 (37%), Gaps = 13/355 (3%) Query: 1 MNTIKIKLNLIDYDSIVNIEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIKTV-SCQ 59 + + + L + + I +E I ++ Y V ++ SI Q Sbjct: 308 LGGDEFVVVLENTNEIEELES------IAQSIMQNASNTYPVAKMEMMITASIGIASYPQ 361 Query: 60 KMKLYKKLNVKSDLTLWRDVFLRFKAYLQPKNIICDNFN-SSVLPVVSSKGESMAHYNIY 118 L +D ++R Y ++ + DN N L K + ++ Sbjct: 362 HADDVDNLLKNADAAMYRAKSTGHNMYCVYEDHMADNINAHLTLGGGLRKAIEEEQFILH 421 Query: 119 YQPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHI----NKLF 174 YQP + + G + I + + + D I + L + + Sbjct: 422 YQPKIRLPDEIVVGAEALIRWVHPELGMISPD-QFIPLAEESGLILPLGEWVIRRACRQL 480 Query: 175 SPIKNNLPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRR 234 + +++N++ + D+ ++ G + L L+ + + ++ Sbjct: 481 QEWREAGLDPIKLSVNLSSRQFMQADLVDMVQRALEETGVDPEYLELELTESMLMADAQQ 540 Query: 235 YQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATT 294 L R + LS++DFG GY+ L++L+ P + + ++ HD+ + D I Sbjct: 541 SIEKLHSFRKLGLTLSIDDFGTGYSSLAYLKKFPIQTLKIDRSFIHDLGLDCDNDAIVKA 600 Query: 295 IIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLLAS 349 I ++ L++ VIA+G+E + Q + + ++G S PL +D F+ L A Sbjct: 601 TIAMANSLNLKVIAEGVENRSQVDVLNGYDCQEVQGYLFSKPLSSDDFLMYLKAH 655 >UniRef50_A6U700 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=4 Tax=Rhizobiaceae RepID=A6U700_SINMW Length = 772 Score = 503 bits (1298), Expect = e-141, Method: Composition-based stats. Identities = 56/356 (15%), Positives = 135/356 (37%), Gaps = 12/356 (3%) Query: 1 MNTIKIKLNLIDYDSIVNIEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIKTV-SCQ 59 + + + L +I L ++ S + + S + + S+ Sbjct: 422 VGGDEFIILLNGLPKERDIVLSRL-----EDIRSAIAMPLQLQGRSLQVSCSMGVACFPN 476 Query: 60 KMKLYKKLNVKSDLTLWRDVFLRFKA-YLQPKNIICDNFNSSVLPVVSSKGESMAHYNIY 118 + + +L +D+ ++R L + + + + + + ++ Sbjct: 477 QGRTAGELLANADMAMYRAKELGRDNIQVFTEEMAARAHERLQWQEELREALAGEEFLLH 536 Query: 119 YQPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINKLFSP-- 176 +QP N G I + + + + I + + + Sbjct: 537 FQPQMNLGTGRIFAAEALLRWNHPVRGIISPSV-FIPLAEETGLIVPIGDWALRAACRQL 595 Query: 177 --IKNNLPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRR 234 ++ I++N++ + +K G E L L+ + + + Sbjct: 596 KAWQDAGLPPLIISVNVSARQFRERNWASRVAEILKETGLEARYLELELTESLIMQDVPG 655 Query: 235 YQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATT 294 +++ + V+L+++DFG GY+ LS L+ P + + ++ DI ++ I + Sbjct: 656 AIATMHALEAIGVHLAIDDFGTGYSSLSALKRFPVRRLKIDRSFVTDIPLDADDMAITSA 715 Query: 295 IIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLLASL 350 II L+++L + VIA+G+E++ Q ++ + G ++G S PL A+AF L ++ Sbjct: 716 IISLAQKLGLRVIAEGVESEAQVEFLQKAGCDEIQGYFFSRPLSAEAFESLLSSAR 771 >UniRef50_B7V0E6 Motility regulator n=25 Tax=Pseudomonas RepID=B7V0E6_PSEA8 Length = 1415 Score = 503 bits (1297), Expect = e-141, Method: Composition-based stats. Identities = 51/354 (14%), Positives = 127/354 (35%), Gaps = 9/354 (2%) Query: 1 MNTIKIKLNLIDYDSIVNIEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIKT-VSCQ 59 M + L L I + ++ +L +L + +++ SI +S Q Sbjct: 1056 MGGDEFTLLLPSQGD-REIALKRAI-QVAELILGRLARPFTLEGREFFVTASIGVALSPQ 1113 Query: 60 KMKLYKKLNVKSDLTLWRDVFLRFKAYLQPKN-IICDNFNSSVLPVVSSKGESMAHYNIY 118 L +D ++ + + + + L + + + ++ Sbjct: 1114 DGAELSLLMKNADTAMYHAKEMGKNNFQFYQAEMNARALERLELESDLRRALELGEFVLH 1173 Query: 119 YQPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINKLFSPIK 178 YQP + + G + + ++ S+ I V+ + + Sbjct: 1174 YQPQFTGDGRRLTGAEALLRWQHPRRGLV-PPSEFIPVLEEIGLVAQVGDWLLAEACKQL 1232 Query: 179 NNLPHG----FFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRR 234 + +++N++ + + G L L+ + + + Sbjct: 1233 RSWHKAKVRVPKVSVNLSARQFADGQLGERIAAILYETGIPPACLELELTESILMSDVAE 1292 Query: 235 YQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATT 294 L ++ + ++++DFG GY+ L++L+ P + + ++ + IA Sbjct: 1293 AMQILSGLKRLGLAIAVDDFGTGYSSLNYLKQFPIDVLKIDRSFVDGLPHGEQDAQIARA 1352 Query: 295 IIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLLA 348 II ++ L++ VIA+G+E++ Q ++ E G ++G P+PA+ F + Sbjct: 1353 IIAMAHSLNLMVIAEGVESQAQLDFLREHGCDEVQGYLFGRPMPAEQFGMLYAS 1406 >UniRef50_A1KCA9 GGDEF/EAL/PAS/PAC-domain containing protein n=1 Tax=Azoarcus sp. BH72 RepID=A1KCA9_AZOSB Length = 689 Score = 503 bits (1297), Expect = e-141, Method: Composition-based stats. Identities = 58/355 (16%), Positives = 139/355 (39%), Gaps = 7/355 (1%) Query: 1 MNTIKIKLNLIDYDSIVNIEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIKTV-SCQ 59 ++ +L ++ + + ++L + +++ + SI Sbjct: 328 LSDTVARLGGDEFIVLAPDTGAEGAVRLAEKILEVFAAPFDLDDRELTISPSIGIARYPD 387 Query: 60 KMKLYKKLNVKSDLTLWRDVFLRFK-AYLQPKNIICDNFNSSVLPVVSSKGESMAHYNIY 118 K + L +D+ +++ + + S +L + ++ Sbjct: 388 DGKDFPALLQSADIAMYQAKREGRNGFRMFSIEMNAPILESLLLETQLRRALDHGQLSLV 447 Query: 119 YQPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINKLF---- 174 YQP+ + +G I G + + ++ + I + + + + Sbjct: 448 YQPMVDIASGRIVGAEALLRWQHPQHGEISP-VRFIPVAEESGLILPIGEWVLEQALGQV 506 Query: 175 SPIKNNLPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRR 234 + + +N++ +I L + +G L L+ + + R Sbjct: 507 QRWRAAGHPDLVMAVNLSALQFERLNISNTVLRLLDHYGLPGSALELELTESVLMEDAER 566 Query: 235 YQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATT 294 +++ + + V LS++DFG GY+ L++L +P + + + ++ +I S++ +A T Sbjct: 567 AVAAMLNLADRGVRLSVDDFGTGYSSLAYLTRLPLAKLKIDRSFVRNIPSDASARSVART 626 Query: 295 IIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLLAS 349 I+DL++ L ++VIA+G+E + Q + E +G S P+PA AF L A+ Sbjct: 627 ILDLARSLALEVIAEGVENEAQLLLLREWCCDQAQGYLYSRPVPARAFEALLRAA 681 >UniRef50_Q3A6S1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A6S1_PELCD Length = 947 Score = 503 bits (1296), Expect = e-141, Method: Composition-based stats. Identities = 62/358 (17%), Positives = 134/358 (37%), Gaps = 13/358 (3%) Query: 2 NTIKIKLNLIDYDSIVNIEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIK-TVSCQK 60 K + L + + ++L + + V++ S SI V Q Sbjct: 589 EGDKFVVLLPG------LSDAETADTVARQILQSIAEPCEVDDQSFFVTASIGGAVYPQH 642 Query: 61 MKLYKKLNVKSDLTLWRDVFLRFKAY-LQPKNIICDNFNSSVLPVVSSKGESMAHYNIYY 119 KL +D+ ++ L Y + + S L + + + Y Sbjct: 643 GADGDKLLKNADMAMYASKELGRNTYCTFTEEMNRRVLERSGLEHNLRLALAREEFFLAY 702 Query: 120 QPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINKLFSPIKN 179 QP + G + G + + ++++ + I + + + + Sbjct: 703 QPQVDQATGKVLGSEALLRWRHAEKGMISP-GQFIPLAEESGLILPIGHWVLQTACAQNK 761 Query: 180 NLP----HGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRY 235 I +N++ D + +K + L L+ + + Sbjct: 762 AWQLAGYPPMRIAVNLSARQFQQPDFFDQVAQVLKDTELDPRYLELELTESLLMADADVA 821 Query: 236 QSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTI 295 +LR +R+ V ++++DFG GY+ LS+L+ P + + + DI + I T+ Sbjct: 822 VETLRALRDLGVGIAIDDFGTGYSSLSYLKTFPIDRIKIAQEFVLDITRDPGDAAIVETV 881 Query: 296 IDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLLASLKQV 353 I ++ L +D++A+G+ET+ Q ++ R + ++G P+PA+ F+ L +L V Sbjct: 882 IAMAHGLGLDIVAEGVETEAQLEFLRARRCQVMQGYYFGRPMPAENFIEYLSENLVSV 939 >UniRef50_D2LQL8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Bacillus cellulosilyticus DSM 2522 RepID=D2LQL8_BACS4 Length = 1016 Score = 503 bits (1296), Expect = e-141, Method: Composition-based stats. Identities = 58/354 (16%), Positives = 134/354 (37%), Gaps = 13/354 (3%) Query: 1 MNTIKIKLNLIDYDSIVNIEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIKT-VSCQ 59 + + + L +I L ++ + + + + + SI V Sbjct: 670 LGGDEFIILL------THITDVSDLQASANLIIEKFKEPFFIQNQDVFTSASIGISVYPD 723 Query: 60 KMKLYKKLNVKSDLTLWRDVFLRFKA-YLQPKNIICDNFNSSVLPVVSSKGESMAHYNIY 118 + Y L +D+ ++R + I + K + ++ Sbjct: 724 HGRDYDSLTGNADIAMYRAKENGKNQMEMYSSEINTLTMERFQMENQLRKALEREEFVLH 783 Query: 119 YQPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINKLFSP-- 176 YQP ++ +N + G + + +SD + + I + + + K Sbjct: 784 YQPQFHLENNEVLGIEALLRWNSSDRGIVSP-MEFIPLAEETGLIIPIGYWVLKEACRQN 842 Query: 177 --IKNNLPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRR 234 + +++NI+ + D + ++ L L+ + + I Sbjct: 843 KRWMDQGHRPKIVSVNISARQLQEKDFVQAVKSILEDTQLPTQYLCLEITESTAIKNIDI 902 Query: 235 YQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATT 294 + L+ + + ++++DFG GY+ L+ L+ +P S + + K+ D++ + I Sbjct: 903 SMNMLKELGELGIKIAIDDFGTGYSSLAMLKQLPISNIKIDKSFIRDMDVDKDDGAIVRA 962 Query: 295 IIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLLA 348 II ++ L + V A+G+ET+ Q +++ YL+G S PLPA+ +R + Sbjct: 963 IIAMAHSLELTVTAEGVETEDQKNILLQEKCNYLQGYLYSKPLPAEECLRFVQE 1016 >UniRef50_Q0F2A0 Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0F2A0_9PROT Length = 644 Score = 503 bits (1296), Expect = e-141, Method: Composition-based stats. Identities = 56/358 (15%), Positives = 127/358 (35%), Gaps = 14/358 (3%) Query: 1 MNTIKIKLNLIDYDSIVNIEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIKT-VSCQ 59 + + + + I ++ P L +L+ + + Y + SI + Sbjct: 291 IGGDEFLIIMP---GIKDVHDPRFL---CERILNMIGQPYLIGTQECFVGASIGISLYPL 344 Query: 60 KMKLYKKLNVKSDLTLWRDVFLRFKAYLQPK-NIICDNFNSSVLPVVSSKGESMAHYNIY 118 + L +D +++ AY + + F + + + Sbjct: 345 DGDNVESLVKNADTAMYQAKDSGRNAYKFFTPAMGEEAFKRMEMERALRYAIEKNQFKLL 404 Query: 119 YQPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINKLFSPIK 178 YQP +G I G + + + + + I+ N N + + + Sbjct: 405 YQPQVELSSGRILGVEALLRWTHPEWGPISPSV-FISLIENTNLILPIGEWVLDEACKQN 463 Query: 179 NNLPH-----GFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIR 233 + +N D+ ++ G L L+ + + I Sbjct: 464 KAWQALHPGFPLRMAVNFAARQFAQADLVETVAKALQKSGLAAEFLELEITEGSAMNDIE 523 Query: 234 RYQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIAT 293 ++ ++ V ++++DFG G++ L++L+ P + + K+ +I+ I Sbjct: 524 LNIRKMQALKELGVSIAIDDFGTGFSSLAYLKRFPIDILKIDKSFLDEIQHGKKDAAIVA 583 Query: 294 TIIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLLASLK 351 TI +++ L ++VIA+G+ETK Q ++ G ++G S P+P + L K Sbjct: 584 TISEMAHSLGMEVIAEGVETKYQLEFLRGHGCDMIQGYLFSRPVPPEQIAEILQKGGK 641 >UniRef50_B8GSM4 Diguanylate cyclase/phosphodiesterase n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GSM4_THISH Length = 648 Score = 502 bits (1295), Expect = e-141, Method: Composition-based stats. Identities = 67/353 (18%), Positives = 143/353 (40%), Gaps = 13/353 (3%) Query: 1 MNTIKIKLNLIDYDSIVNIEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIKT-VSCQ 59 + + + L + DS+ L+ I L+ + + + + S+ V Sbjct: 301 LGGDEFGIILDEVDSLD------LVVRIVQHLIEVISREHDIEGHQVFLTCSVGISVFPY 354 Query: 60 KMKLYKKLNVKSDLTLWRDVFLRFK-AYLQPKNIICDNFNSSVLPVVSSKGESMAHYNIY 118 L +D ++ K+I + +L K + + ++ Sbjct: 355 DGDDADTLIKNADAAMYDAKQRGRNSFQFYTKDINSQTYRQLILENQLVKALAREEFEVH 414 Query: 119 YQPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINKLFSPIK 178 YQP + +G + G + + ++ + ++ I + L + + Sbjct: 415 YQPQVDVISGQVVGAEALVRWRHPEKGL-QPPANFIAIAEETGIIEGLGAWVLQKVCQDI 473 Query: 179 NNLPHGF----FITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRR 234 L I+IN++ D+ +C + I+ G + L+ + + I Sbjct: 474 RQLTRDGYRIPRISINLSARQFRQSDLVEQCRNTIRSAGIAPAYIELELTESTIMKDIDI 533 Query: 235 YQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATT 294 LR++ V L+++DFG GY+ L++L++ P + + K+ DI + + I T Sbjct: 534 AVGMLRQLNALGVRLAIDDFGTGYSSLNNLKHFPIDTLKIDKSFVRDIPGDRDDEAIVTA 593 Query: 295 IIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLL 347 I+ L+K L ++V+A+G+ET++Q G++ G + ++G S PLP + F L Sbjct: 594 IVALAKSLELEVVAEGVETREQLGFLKRLGCEIVQGYFFSRPLPFEGFREYLK 646 >UniRef50_Q5P5U6 Putative uncharacterized protein n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5P5U6_AZOSE Length = 740 Score = 502 bits (1294), Expect = e-141, Method: Composition-based stats. Identities = 54/354 (15%), Positives = 131/354 (37%), Gaps = 14/354 (3%) Query: 2 NTIKIKLNLIDYDSIVNIEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIKT-VSCQK 60 + + L +++ + + +++ + + VN + SI V Sbjct: 395 GGDEFIVMLP------HVDSAEQAAHVAGKIIEAMEQTIPVNGYVLNVSFSIGISVFPDD 448 Query: 61 MKLYKKLNVKSDLTLWRDVFLRFKAYLQPKN-IICDNFNSSVLPVVSSKGESMAHYNIYY 119 L +D+ ++R + + L + + + + Sbjct: 449 AMDPDTLIRNADIAMYRSKASGRNQFQFFTADMNAHALERLALENDLHRAVERGEFRLMF 508 Query: 120 QPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINKLFSP--- 176 QP + +G+I G + + ++ ++ I + + + + Sbjct: 509 QPQFE-GSGSIIGAEALLRWQHPQRGLVTP-AEFIPVAEETGLIVPIGTWVLERACQQVR 566 Query: 177 -IKNNLPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRY 235 ++ +++NI+ ++ + V E L L+ + ++ Sbjct: 567 AWRDAGLKKITVSVNISALQFSQKNLLELIRRLLAVSNIEPGTLELELTESVLMHDHVAT 626 Query: 236 QSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTI 295 + ++ V ++++DFG GY+ LS+L++ P S + + ++ D+ I I Sbjct: 627 SGLMSELKEMGVRMAIDDFGTGYSSLSYLRSFPISKLKIDQSFVRDLSDGGDAGAITGAI 686 Query: 296 IDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLLAS 349 I L+K L++ VIA+G+ET +QA ++ + +G S P+ + F L A Sbjct: 687 IGLAKNLNMRVIAEGVETAQQASFLQAQCCDEFQGHFFSQPVSPEKFAELLRAE 740 >UniRef50_Q2Y6N3 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=1 Tax=Nitrosospira multiformis ATCC 25196 RepID=Q2Y6N3_NITMU Length = 1025 Score = 502 bits (1294), Expect = e-141, Method: Composition-based stats. Identities = 56/359 (15%), Positives = 133/359 (37%), Gaps = 17/359 (4%) Query: 1 MNTIKIKLNLIDYDSIVNIEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIKT-VSCQ 59 + + L L D P + I +++S L + + + S+ + Sbjct: 665 LGGDEFALILSDLV------QPEDATLIAEKVISALQVPFELETQEIYVSASLGISIYPG 718 Query: 60 KMKLYKKLNVKSDLTLWRDVFLR---FKAYLQPKNIICDNFNSSVLPVVSSKGESMAHYN 116 L +D +++ ++ YL N + + + Sbjct: 719 DGTDADSLLRNADTAMFQAKEQGPAIYQFYLPQMNE--RAVARLKIETQLRGALARREFV 776 Query: 117 IYYQPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHI----NK 172 ++YQP + NG I G + + ++ I+ + + + + + Sbjct: 777 LHYQPKASLINGEITGFEALLRWQHPAHGLV-PPLQFISVLEDTGLIVAVGEWVVKTVCE 835 Query: 173 LFSPIKNNLPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYII 232 + I IN++ D++ ++ + L + + + Sbjct: 836 QIREWQGQGLVLHPIAINLSARQFQQQDLDSIIGETLRATNIDPRLLEFELTESVLMKEA 895 Query: 233 RRYQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIA 292 ++L+ ++ V +S++DFG GY+ L++L+ P + + + D+ ++ I Sbjct: 896 EMAANALQNLKAFGVQISMDDFGTGYSSLAYLKRFPLDVLKIDRAFIRDVTTDPDDATIT 955 Query: 293 TTIIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLLASLK 351 +I L+ L + V+A+G+ET+ Q ++I G ++G S PLP + + L+ + Sbjct: 956 VAMIKLAHSLGLKVVAEGVETRAQLEFLIRHGCDEMQGYYFSQPLPLEGASKVLMGGYR 1014 >UniRef50_C0ZBT6 Probable signaling protein YkoW n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZBT6_BREBN Length = 816 Score = 502 bits (1293), Expect = e-140, Method: Composition-based stats. Identities = 57/357 (15%), Positives = 130/357 (36%), Gaps = 14/357 (3%) Query: 1 MNTIKIKLNLIDYDSIVNIEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIKT-VSCQ 59 M + + + + +++ L + +++ + + SI T + Sbjct: 461 MGGDEFTILCETG------ADGREAASLADKIIEALKQPFTLKDSEFYISASIGTAIFPD 514 Query: 60 KMKLYKKLNVKSDLTLWRDVFLRFKAYLQPK-NIICDNFNSSVLPVVSSKGESMAHYNIY 118 L K+D ++ +L + + + K +Y Sbjct: 515 HGTDAVALLKKADTAMYEVKKQGKNGHLFYTTDFDAQLLENIEIERDLRKAIERKELVVY 574 Query: 119 YQPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINKLFS--- 175 YQP +++++ + G + + + + I + + + + Sbjct: 575 YQPQFHSESNRMIGVEALVRWNHPTKGMLSP-GVFIPIAEETGLIYEIGTWVLREACRQM 633 Query: 176 -PIKNNLPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRR 234 + +++N++ ++ + + ++ L L+ + + Sbjct: 634 KQWHDKGGPLIPVSVNLSSHQFHQRNLVQYIKNILEETKLAPHFLELEITESMMM-DPAV 692 Query: 235 YQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATT 294 S L + +SL+DFG GY+ LS+L+ P + + ++ D+ N I T Sbjct: 693 SISILHELNKIGTRISLDDFGTGYSSLSYLKKFPIHKLKIDRSFITDLSRNENDKAIVAT 752 Query: 295 IIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLLASLK 351 II ++K L +DVIA+GIETK Q + E K ++G S PL A+ + ++ Sbjct: 753 IISMAKHLKLDVIAEGIETKDQLDILTENHCKEIQGYYYSRPLSANEVEQSFFVPIR 809 >UniRef50_Q1NJA1 PAS:GGDEF:EAL n=7 Tax=delta proteobacterium MLMS-1 RepID=Q1NJA1_9DELT Length = 941 Score = 502 bits (1293), Expect = e-140, Method: Composition-based stats. Identities = 58/356 (16%), Positives = 132/356 (37%), Gaps = 10/356 (2%) Query: 2 NTIKIKLNLIDYDSIVNIEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIK-TVSCQK 60 + + L + + + ++ + L + + ++ SI ++ Sbjct: 580 GGDEFMVLLNNLSPERHAAI-SQAGRVAEKIRAALDQPFDLDGYEHHIGVSIGLSLFLGH 638 Query: 61 MKLYKKLNVKSDLTLWRDVFLRFKAYLQPKNIICDNFNSS-VLPVVSSKGESMAHYNIYY 119 +L ++D +++ + + L V + + ++Y Sbjct: 639 DTPADELFKRADAAMYQAKHAGRNQVRFFDPEMQAELEQASALVVDLRQAIWQGQFQLHY 698 Query: 120 QPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINKLFSPIKN 179 QP A +G I G + + ++ + + I N + + + + Sbjct: 699 QPQ-TANDGRIIGAEALLRWRHPERGPVSP-MQFIPLAEESNLILAIGRWVLEEACGQLA 756 Query: 180 NLPH-----GFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRR 234 + +N++ + E + G + L L+ + + + Sbjct: 757 AWADLPAAGNCKLAVNVSARQFRQPEFVAEIRRILAATGADPKLLKLELTESIVMTELAD 816 Query: 235 YQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATT 294 S ++ +R+ + S++DFG GY+ L+ L+ +P + + + D+ S+ D I T Sbjct: 817 TVSKMQELRDLGIGFSMDDFGTGYSSLAQLKRLPLEQLKIDRAFVRDLGSDPHDDAIVET 876 Query: 295 IIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLLASL 350 II + + L I VIA+G+ETK+Q + G +G S P+PA F L + + Sbjct: 877 IIAMGRTLDIQVIAEGVETKEQLATLARYGCDAYQGYLFSRPVPAAQFAHLLTSGV 932 >UniRef50_A0L2H7 Diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(S) n=12 Tax=Bacteria RepID=A0L2H7_SHESA Length = 1228 Score = 502 bits (1293), Expect = e-140, Method: Composition-based stats. Identities = 60/354 (16%), Positives = 143/354 (40%), Gaps = 7/354 (1%) Query: 2 NTIKIKLNLIDYDSIVNIEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIKT-VSCQK 60 + I +L ++ +++ ++++ L S L + Y ++ + SI + Sbjct: 875 DDIVARLGGDEFVVVLSDTDHDRVAKVAEALRSGLNQTYLIDNKPLHSSPSIGISLFPTD 934 Query: 61 MKLYKKLNVKSDLTLWRDVFLRFKAYLQPKN-IICDNFNSSVLPVVSSKGESMAHYNIYY 119 + L +D+ ++R Y + + + + +YY Sbjct: 935 GDSVEALMKNADMAMYRAKAAGRNNYQFFTAAMNTLVTERQQIETGLRQAIACNELLLYY 994 Query: 120 QPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINK----LFS 175 QP + +G + G + I ++ + A D I + + + + + + Sbjct: 995 QPQVDISSGQVVGVEALIRWQHPELGLVAPD-RFIPIAEEIDMIIPIGQWVLENALAQLA 1053 Query: 176 PIKNNLPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRY 235 ++ G + +N++ + I + ++ + + L L+ + + + Sbjct: 1054 EWRDKGAKGLRMAVNLSAHQLRKDTIVADIINVLTKHKLGKGALELEITESVAMQYPEQN 1113 Query: 236 QSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTI 295 L +R + + L+++DFG GY+ LS+L+ +P + L ++ DIES+ I+ Sbjct: 1114 AKLLAELRQHGIELAIDDFGTGYSSLSYLKLLPLDRLKLDRSFVKDIESDPNDAAISAAT 1173 Query: 296 IDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLLAS 349 I ++ +L + V+A+G+E + Q + G ++G S PL AD R + + Sbjct: 1174 ISMAHELGLTVVAEGVENEAQLVLLSGMGCDLVQGYYFSKPLAADDCFRFIERN 1227 >UniRef50_Q1JX80 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JX80_DESAC Length = 678 Score = 501 bits (1292), Expect = e-140, Method: Composition-based stats. Identities = 55/356 (15%), Positives = 127/356 (35%), Gaps = 14/356 (3%) Query: 1 MNTIKIKLNLIDYDSIVNIEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIKT-VSCQ 59 + + + L DY N+ + ++L L + + + S+ + Sbjct: 330 LGGDEFVIILSDYKEDANL------PRVADKILKALSSPFDLGVREVYSSTSVGIAIYPD 383 Query: 60 KMKLYKKLNVKSDLTLWRDVFLRFK-AYLQPKNIICDNFNSSVLPVVSSKGESMAHYNIY 118 L +D+ ++ + + + + + I Sbjct: 384 DGDEATDLLRHADMAMYAAKESGGDTFRFYSSEMNARAVSRMDMEANLRRALEQEEFFIE 443 Query: 119 YQPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINK----LF 174 YQP + +AG + + ++ + I N + L + + Sbjct: 444 YQPQIDLITNKVAGVEALLRWQHPQLGVI-PPTQFIGLAEETNLILPLGEWVMRRVFEQC 502 Query: 175 SPIKNNLPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRR 234 K F + IN++ + D + G L + + + + Sbjct: 503 VMWKQEGYLPFRVGINVSGRQFVQPDFVDMVCRLLDETGAAPELLEFEITESVVMKDVDA 562 Query: 235 YQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATT 294 +L ++ + ++++DFG GY+ LS L+++P + + + K+ D++ N+ I Sbjct: 563 AVLTLEALKKLGINMAIDDFGTGYSSLSCLKHLPLNRLKIDKSFISDLQDNADDRAIVEA 622 Query: 295 IIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFV-RKLLAS 349 I ++K+L + V A+G+ET+ Q G++ +R ++G S PL L+ Sbjct: 623 TIAMAKRLELGVTAEGVETEGQYGFVQKRECDEVQGFYFSRPLSPSEVADAWLIKR 678 >UniRef50_Q39WZ5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Geobacter RepID=Q39WZ5_GEOMG Length = 739 Score = 501 bits (1292), Expect = e-140, Method: Composition-based stats. Identities = 58/358 (16%), Positives = 135/358 (37%), Gaps = 8/358 (2%) Query: 3 TIKIKLNLIDYDSI-VNIEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIKT-VSCQK 60 ++ ++ I VN++ + + ++L L ++++ SI + Sbjct: 380 DTVARIGGDEFTIILVNVDTVEDVKRMGQKILKTLAAPFNIDTHELFVTASIGISLFPSD 439 Query: 61 MKLYKKLNVKSDLTLWRDVFLRFKA-YLQPKNIICDNFNSSVLPVVSSKGESMAHYNIYY 119 +L K+D+ ++ + + +L K + +YY Sbjct: 440 GDNLDQLVKKADIAMYCVKGEGRNNVQFYSPQMDANADKRLLLETSLRKALDNREFRVYY 499 Query: 120 QPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINKLFS---- 175 QP + + I + I + + + I + + + + Sbjct: 500 QPKVDIVSKRITAMEALIRWDHPILGLVSP-GEFIPLAEETGLIIPIGEWVLRAACFQNC 558 Query: 176 PIKNNLPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRY 235 + +N++ ++ + G L L+ + + Sbjct: 559 EWVRQGIPPMRVAVNLSGYQFQQKNLLETIRGILDETGLTADLLELEITESVIMQNPDFA 618 Query: 236 QSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTI 295 S L ++R+ V++S++DFG+GY+ L+HL+ + + + K+ D+E NS IAT I Sbjct: 619 VSVLNQLRDLGVHISIDDFGIGYSSLAHLKRFSVNTLKIDKSFVRDVEINSADAAIATAI 678 Query: 296 IDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLLASLKQV 353 I + L++ VIA+G+ET+ Q ++ + ++G S+P+P + + + Sbjct: 679 IAMGNSLNLKVIAEGVETEGQLSFLSDNKCDEVQGYLFSTPMPPEKVAEFMREHGRSA 736 >UniRef50_A1ALB3 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=2 Tax=Desulfuromonadales RepID=A1ALB3_PELPD Length = 705 Score = 501 bits (1292), Expect = e-140, Method: Composition-based stats. Identities = 65/357 (18%), Positives = 138/357 (38%), Gaps = 13/357 (3%) Query: 1 MNTIKIKLNLIDYDSIVNIEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIKTV-SCQ 59 + + + L S S + ++L+ + + +++ SI Sbjct: 355 LGGDEFVVVLDGVVS------EKGASIVAKKILTLIAEPIPIDDHELYTTASIGIAAYPM 408 Query: 60 KMKLYKKLNVKSDLTLWRDVFLRFK-AYLQPKNIICDNFNSSVLPVVSSKGESMAHYNIY 118 + L +DL +++ L + ++ +L K + + Sbjct: 409 DGEDGHTLLKHADLAMYKAKELDRNNFHFFSHDMNIKVMERMMLENSMRKALERDEFFLV 468 Query: 119 YQPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHI----NKLF 174 YQP +A++G I G + + + D D I + L + + Sbjct: 469 YQPQVDARSGRITGVEALLRWNHPDMGLLTPD-RFIYLAEETGFIVPLGEWVLMTACRQN 527 Query: 175 SPIKNNLPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRR 234 + + +N++ + ++ + G E L L+ + + + Sbjct: 528 RAWQKLGFPPLRVAVNLSGKQFGQHRLDEMISAILLETGLEPEWLELEITESAIMRNADQ 587 Query: 235 YQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATT 294 + LR ++ + L+++DFG GY+ LS+L++ P + + + KT DI +N IA Sbjct: 588 NIAILRSLKEKGISLAIDDFGTGYSSLSYLKHFPITRLKIDKTFVQDITTNPDDAAIAEI 647 Query: 295 IIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLLASLK 351 II +++ L ++VIA+G+ET+ Q ++ ++G S PL D FV L + Sbjct: 648 IIAMAQTLKLNVIAEGVETRAQMEFLSTHTCFEMQGYLFSRPLTTDKFVYLLRDGIS 704 >UniRef50_A0L9T5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Proteobacteria RepID=A0L9T5_MAGSM Length = 1275 Score = 501 bits (1292), Expect = e-140, Method: Composition-based stats. Identities = 62/353 (17%), Positives = 137/353 (38%), Gaps = 13/353 (3%) Query: 1 MNTIKIKLNLIDYDSIVNIEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIKTVS-CQ 59 + + + L IE ++ I ++ L + + + SI Sbjct: 916 LGGDEFTVILPG------IEQTNDVARIAGAIVKSLGEVFVLQGHEVFIGGSIGIAMHPD 969 Query: 60 KMKLYKKLNVKSDLTLWRDVFLRFKAYLQP-KNIICDNFNSSVLPVVSSKGESMAHYNIY 118 + Y+ L +D ++R Y ++ N L + ++ Sbjct: 970 DGEDYETLTKHADTAMYRAKEEGRGTYKFFTSDMNEINGRRLSLERALRQAVECNQLTLH 1029 Query: 119 YQPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINKLFSPIK 178 YQP + K I G + + + + + D I + + + + Sbjct: 1030 YQPKVDVKQCRITGMEALVRWNHPEQGLVSP-VDFIPIAEETGLIITIGEWVMQQACMDA 1088 Query: 179 NNL----PHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRR 234 L H + IN++ + + + ++ G L ++ + + + R Sbjct: 1089 KRLARSSRHPLQVAINLSAKQFQDALLVAKLERSLQQSGLAPELLEVEITESLAMGDVNR 1148 Query: 235 YQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATT 294 + +R V +S++DFG GY+ LS+L+ +P + + + K+ D+ +S I ++ Sbjct: 1149 TIEQIGELRALGVKVSIDDFGTGYSSLSYLKKLPLNALKIDKSFIQDLYLDSDDTAIVSS 1208 Query: 295 IIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLL 347 I+ ++ L + V+A+G+E + Q ++ E+ ++G S PLP +AF + LL Sbjct: 1209 ILSMASALGLSVVAEGVENQAQIHFLCEKECPTIQGYFFSKPLPFEAFEKFLL 1261 >UniRef50_Q47HF3 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Proteobacteria RepID=Q47HF3_DECAR Length = 994 Score = 500 bits (1290), Expect = e-140, Method: Composition-based stats. Identities = 60/346 (17%), Positives = 136/346 (39%), Gaps = 8/346 (2%) Query: 10 LIDYD-SIVNIEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIKT-VSCQKMKLYKKL 67 ++ + N+ + +L + +SV S SI V + + + + Sbjct: 501 GNEFGFVMANLSHERDALALAQRMLDAISVPFSVAGQSVAITASIGISVFPKNGENGEAM 560 Query: 68 NVKSDLTLWRDVFLRFKAY-LQPKNIICDNFNSSVLPVVSSKGESMAHYNIYYQPIYNAK 126 +D L R + + D + + + ++YQP + Sbjct: 561 LRSADAALLRAKQSGRNTFSFYSPEMDADAARRLSIESALRDALARDEFCVHYQPQVSLD 620 Query: 127 NGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINKLFSPIKNNLPH--- 183 +G++ G + + ++ + + I + + + + Sbjct: 621 SGHMIGMEALLRWNSALLGPISP-VEFIPIAEETGLIMQIGDWVLRTACHQTKAWLDLGL 679 Query: 184 -GFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSLRRI 242 + +N++P D+ + H + G L L+ + + I + ++ Sbjct: 680 LPLHVAVNLSPRQFRQADLPAQVAHALAESGLPAGALELEITESAFIDDIDDAVAMCSKL 739 Query: 243 RNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSKQL 302 ++ + LSL+DFG GY+ L+++ PF + + ++ DI +N + IA+ I + + L Sbjct: 740 KSLGIKLSLDDFGTGYSSLAYVSRFPFDKIKIDQSFVRDIVNNPVNAAIASAAIVMGRSL 799 Query: 303 HIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLLA 348 ++ V+A+G+ET+ QA ++ R ++G S PLP + F LL+ Sbjct: 800 NLSVLAEGVETEAQAAFLRSRRCDAIQGYLFSRPLPPEEFAPLLLS 845 >UniRef50_C6P6N2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P6N2_9PROT Length = 1043 Score = 500 bits (1290), Expect = e-140, Method: Composition-based stats. Identities = 61/355 (17%), Positives = 133/355 (37%), Gaps = 10/355 (2%) Query: 1 MNTIKIKLNLIDYDSIVNIEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIKTVSC-Q 59 M + + L S N E I ++ ++L + Y +++ + SI V Sbjct: 690 MGGDEFLVILNGLGSEQN-EAAIRAELIAEKIRNELCRPYQLDKTEHHSSSSIGIVLFRG 748 Query: 60 KMKLYKKLNVKSDLTLWRDVFLRFKAYLQPKNIICDNFN-SSVLPVVSSKGESMAHYNIY 118 ++L D +++ A + + + L + ++ Sbjct: 749 HSDDPERLLAHVDTAMYQSKAKGRNAICFFDSSMQEILEKRGQLETALRGALERKEFLLH 808 Query: 119 YQPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINKLFSPIK 178 YQ + +G G + + N+ + + I + + + + Sbjct: 809 YQLQMD-SSGRPIGAEALLRWNNAKLGSVSP-VQFIPVAEESGLILPIGHWVLETACAQL 866 Query: 179 NNLPHG-----FFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIR 233 I +N++ + + ++ G + L L+ + L I Sbjct: 867 ARWQSDPRFNRLCIAVNVSAIQFREAAFVAKVRNVLQQSGIQPWLLKLELTESLVLDDIN 926 Query: 234 RYQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIAT 293 + ++N V S++DFG GY+ LS+L +P + + ++ DI ++ I Sbjct: 927 DSILKMEALKNLGVKFSMDDFGTGYSSLSYLSRLPLDQLKIDQSFVRDITTDQHDAAIVQ 986 Query: 294 TIIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLLA 348 TII ++ L ++VIA+G+ET++Q ++ RG + +G + P+P + KL Sbjct: 987 TIISMALSLGMEVIAEGVETEEQREFLDLRGCQAYQGYLYAKPMPIEELEIKLAQ 1041 >UniRef50_Q3SJL3 Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) and Response Regulator Receiver modulation n=1 Tax=Thiobacillus denitrificans ATCC 25259 RepID=Q3SJL3_THIDA Length = 836 Score = 500 bits (1289), Expect = e-140, Method: Composition-based stats. Identities = 59/354 (16%), Positives = 128/354 (36%), Gaps = 13/354 (3%) Query: 2 NTIKIKLNLIDYDSIVNIEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIK-TVSCQK 60 + + L D + NI I ++ + ++ + S+ +V Sbjct: 473 GGDEFTIVLGDLSHVDNI------PAILHKVRAAFETPLVISGQEVYASFSVGVSVYPHD 526 Query: 61 MKLYKKLNVKSDLTLWRDVFLRFKAYLQPK-NIICDNFNSSVLPVVSSKGESMAHYNIYY 119 L +D ++R Y + L + + ++Y Sbjct: 527 GDDGATLLKNADTAMYRSKASGRNRYQFYAPEMNARGQELLSLETDLRRALDRGEFRLHY 586 Query: 120 QPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINKLFSPI-- 177 QP + ++ IAG + + K+ A D + + + + + + Sbjct: 587 QPQLDLRDNRIAGVEALLRWKHPRDGVIAP-GDFVPLLEDTGLIVPVGEWVLRNACTQYR 645 Query: 178 --KNNLPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRY 235 + + I++N++ + R+ ++ L L+ + + + Sbjct: 646 ACRESGVAPVRISVNVSARQFREDTLLRQVEQVLREECMPPHHLELEITESTAMQDVAAT 705 Query: 236 QSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTI 295 L + V L+++DFG GY+ L++L+ P + + + D ++ IA Sbjct: 706 GDILAALDALGVRLAIDDFGTGYSSLAYLKRFPLDALKIDQAFIRDAPRDANIAAIAEAS 765 Query: 296 IDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLLAS 349 I L +L ++V+A+G+ET +Q ++ R ++G S PLPADA L Sbjct: 766 ISLGHKLGLEVVAEGVETAEQLAFLRRRACDLIQGFHFSRPLPADALTPFLARH 819 >UniRef50_C6X7I8 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6X7I8_METSD Length = 821 Score = 500 bits (1289), Expect = e-140, Method: Composition-based stats. Identities = 65/357 (18%), Positives = 135/357 (37%), Gaps = 13/357 (3%) Query: 1 MNTIKIKLNLIDYDSIVNIEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIKTV-SCQ 59 + + L L + + + + + ++ + + SI Sbjct: 467 LGGDEFVLLL------TSQSLDESIHTVVQRIRNTIINPFIITGRQLTVTCSIGLANFPH 520 Query: 60 KMKLYKKLNVKSDLTLWRDVFLR-FKAYLQPKNIICDNFNSSVLPVVSSKGESMAHYNIY 118 + L +D +++ K + + + L ++ Sbjct: 521 DGRNADTLLSNADSAMYQAKASGSNNFRFYAKEMNAELGHRLSLENDLWHALENQQLVLH 580 Query: 119 YQPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINKLFSPIK 178 YQP +N I G + I ++ I + +D + + + + + Sbjct: 581 YQPQVCMRNSQIIGMEALIRWQHPKLGMI-PPLQFIPLSEDDGLIVPIGIWVMETAAHQN 639 Query: 179 NNLP----HGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRR 234 L + +N++ + D+ ++ G + L L+ + ++ I Sbjct: 640 RQLQLAGYPPIRVAVNLSVRQLEQKDLVHCIEKTLQHSGLDPQCLELEITESMLMHNIEE 699 Query: 235 YQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATT 294 +L RI + V LSL+DFG GY+ LS+L+ +P + + + K+ +DI + IIA + Sbjct: 700 SIITLNRISDLGVQLSLDDFGTGYSSLSYLKRLPINRLKIDKSFINDITTTYNDAIIARS 759 Query: 295 IIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLLASLK 351 II L+ L I VIA+G+E+ Q +++E G ++G LS P P + L + Sbjct: 760 IIALAHSLEIQVIAEGVESADQYAFLLENGCDEVQGYLLSRPRPFEEMEALLRDGGR 816 >UniRef50_Q2W3S8 Predicted signal transduction protein containing a membrane domain n=4 Tax=Bacteria RepID=Q2W3S8_MAGSA Length = 548 Score = 500 bits (1289), Expect = e-140, Method: Composition-based stats. Identities = 58/346 (16%), Positives = 138/346 (39%), Gaps = 7/346 (2%) Query: 7 KLNLIDYDSIVNIEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIKT-VSCQKMKLYK 65 +L+ + ++ I + + L+ + + ++++ SI V Sbjct: 196 RLDGDKFALVMAIADTDDSVIVAEKALNAVKEPFALDGQEVVVTFSIGISVYPLDADSSA 255 Query: 66 KLNVKSDLTLWRDVFLRFKAYLQP-KNIICDNFNSSVLPVVSSKGESMAHYNIYYQPIYN 124 +L ++ L Y K++ + L + + + ++YQP + Sbjct: 256 QLVKHAENALHYAKVSGRNQYQFFSKDMNRKAKSRLELEGRMRRALANQEFVVFYQPKVS 315 Query: 125 AKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINKLFSP----IKNN 180 A I G + I + + + I ++ + + + + Sbjct: 316 ADRDAIVGAEALIRWMDPERGMV-PPGEFIPVAEESGQIEPIGTWVLRQSCIQNRLWQEA 374 Query: 181 LPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSLR 240 + +++N++ + + + + G + L L+ + + + ++ Sbjct: 375 GFNPIKVSVNVSARQFRSPSLLQTVTEVLDSTGLDPKWLELEITESMLMNDVDTAVRKMK 434 Query: 241 RIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSK 300 +R+ + LS++DFG GY+ LS+L P + + + + D+++N T IA II LS+ Sbjct: 435 ALRDLGIGLSIDDFGTGYSSLSYLGRFPITTLKIDRAFIADVDTNPKTAEIARAIIGLSR 494 Query: 301 QLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKL 346 L+++V+A+G E + ++ G ++G S P+PAD F R + Sbjct: 495 GLNLEVVAEGAEIAEHIMFLRNNGCDTVQGFYYSRPVPADEFERMM 540 >UniRef50_Q3A1G1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A1G1_PELCD Length = 1061 Score = 500 bits (1289), Expect = e-140, Method: Composition-based stats. Identities = 48/358 (13%), Positives = 133/358 (37%), Gaps = 12/358 (3%) Query: 1 MNTIKIKLNLIDYDSIVNIEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIKT-VSCQ 59 + + + L + + + ++ ++L ++ + + + S+ + Q Sbjct: 709 LGGDEFVILLAE------VANEEDVGKVAKKILDRITAPFQIADREITVTASLGISIYPQ 762 Query: 60 KMKLYKKLNVKSDLTLWRDVFLRFKAYLQPKNIICDNFNSSVLPVVSSKGESMAHYNIYY 119 + + L +D+ +++ L + + + + ++Y Sbjct: 763 DGEDEETLIRNADIAMYQAKEEGNAFRLYAPEMNIVVHEAMEMETDLRRALDRGELLLHY 822 Query: 120 QPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINK----LFS 175 QP + +G I G + + ++ A I + + + + Sbjct: 823 QPKIDLDSGKITGAEALVRWQHPVRGMIAP-GMFIPLAEETGLILPIGEWVLENICLQIK 881 Query: 176 PIKNNLPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRY 235 + I N++ ++ ++ G L L+ + + ++ Sbjct: 882 SWQTQGFPLVPIAANLSARQFRNDELIATIQRILQDTGLPPHLLELELTESMIMRNVQTA 941 Query: 236 QSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTI 295 +++ + V L+L+DFG GY+ L++L+ P + + ++ D+ + +AT+I Sbjct: 942 AETMQELNALGVSLALDDFGTGYSSLNYLRRFPVDCLKIDRSFISDVADDPSAAAVATSI 1001 Query: 296 IDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLLASLKQV 353 I ++ L + +A+G+ET++Q ++ + +G S+PL + F L + Sbjct: 1002 IAIAHSLGLQAVAEGVETEEQLEFLRQCACDSYQGYLYSAPLAVEEFTAMLRQESTRT 1059 >UniRef50_A1WEV3 Diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(S) n=1 Tax=Verminephrobacter eiseniae EF01-2 RepID=A1WEV3_VEREI Length = 981 Score = 500 bits (1288), Expect = e-140, Method: Composition-based stats. Identities = 54/348 (15%), Positives = 134/348 (38%), Gaps = 7/348 (2%) Query: 7 KLNLIDYDSIVNIEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIKTV-SCQKMKLYK 65 +L ++ ++ +++ LL+ + + + ++ S+ + + Sbjct: 633 RLGGDEFLLLLPATSAAHAAKVASALLTAVAQPFQIDPYELSTTLSVGIAMCPADGESFD 692 Query: 66 KLNVKSDLTLWRDVFLRFKAY-LQPKNIICDNFNSSVLPVVSSKGESMAHYNIYYQPIYN 124 L ++D ++ Y ++ + + + + ++YQP + Sbjct: 693 TLYQRADAAMYSAKQSGRNRYGFFTADLQARTARALQIENALRRALERQQFELHYQPQVS 752 Query: 125 AKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINKLFSPIKNNLPH- 183 G + G + + + + A ++ I N ++ L + + Sbjct: 753 LGTGQVVGAEALLRWHHPELGVVAP-AEFIPVAENSGQIVALGEWVLHTAARDAKRWLDM 811 Query: 184 --GFF-ITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSLR 240 +++N++ + ++ G RL L+ + + + + Sbjct: 812 QLPLRAVSVNLSAVQFRHPQLPEMVTRCLQQAGLPARRLELELTEGAAVDDPVAALAMMD 871 Query: 241 RIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSK 300 ++ + V LS++DFG GY+ LS L+ + + ++ D++ ++ I + II +++ Sbjct: 872 QLHDRGVRLSMDDFGTGYSSLSCLKRFQIYKLKIDQSFVRDLDDDANDRAIVSAIIRMAQ 931 Query: 301 QLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLLA 348 L + A+G+ET Q ++ +G +G S PLPADAF L A Sbjct: 932 ALGMQTTAEGVETDGQLQFLRAQGCDEGQGYLFSRPLPADAFEAYLRA 979 >UniRef50_Q1GXZ6 Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC and GAF sensor(S) n=2 Tax=Proteobacteria RepID=Q1GXZ6_METFK Length = 1238 Score = 500 bits (1288), Expect = e-140, Method: Composition-based stats. Identities = 55/354 (15%), Positives = 134/354 (37%), Gaps = 11/354 (3%) Query: 1 MNTIKIKLNLIDYDSIVNIEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIKTVSCQK 60 + + + + + S S + ++L L + + ++ + SI Sbjct: 883 LGGDEFVVVVENL-SEQGCNAAQEASLVADKILLALSQPFRLSGYEHYSSCSIGVALFCN 941 Query: 61 MK--LYKKLNVKSDLTLWRDVFLRFKAYLQPK-NIICDNFNSSVLPVVSSKGESMAHYNI 117 + +L ++DL ++ + + + + + + Sbjct: 942 EQQVTVDELLKRADLAMYEAKAAGRNTFRFFDPAMQALITKRAAMEEDLRQALRRDEMRL 1001 Query: 118 YYQPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINKLFSPI 177 YYQP +++ G++ G + + ++ + + I + + + + Sbjct: 1002 YYQPQVDSQ-GSLLGAEALVRWEHPQQGLLSPAA-FIELAEETGLILPIGEWVLRTACMQ 1059 Query: 178 KNNL-----PHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYII 232 G +++N++ + D +K G L L+ + + I Sbjct: 1060 LVAWAGRPETAGLVLSVNVSARQLHQHDFIDRVFSILKETGANPQSLKLELTESTLVENI 1119 Query: 233 RRYQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIA 292 + + ++ V S++DFG GY+ L++L+ +P S + + ++ D+ +S I Sbjct: 1120 EEMITKMNILKAMGVGFSMDDFGTGYSSLAYLKRLPLSQLKIDRSFVRDVLVDSNDASIV 1179 Query: 293 TTIIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKL 346 TII L L I+V+A+G+E+ +Q ++ + G +G P PA+ R+ Sbjct: 1180 QTIIALGHGLGIEVVAEGVESWEQQQFLEKHGCLEYQGYLFGRPQPAEQLEREF 1233 >UniRef50_C7RMB6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RMB6_9PROT Length = 922 Score = 499 bits (1287), Expect = e-140, Method: Composition-based stats. Identities = 61/362 (16%), Positives = 139/362 (38%), Gaps = 19/362 (5%) Query: 1 MNTIKIKLNLIDYDSIVNIEFPCLLSEIEIELLSQLLKGYSV---------NEISKRRNR 51 + + + + D + + + + ++L+ L Y + N ++ Sbjct: 555 LGGDEFVVMVQDLAADSMV--VAQVEAVAGKILAALDCPYRLVFDAELGRRNALNYHCTA 612 Query: 52 SIKTVSCQ-KMKLYKKLNVKSDLTLWRDVFLRFKAYLQPKNIICDNF-NSSVLPVVSSKG 109 SI +L ++DL +++ A + + L + Sbjct: 613 SIGITLFGAHSTNVDELLKQADLAMYQAKDSGRNAIRFFDPEMQAAITSRVALEADLREA 672 Query: 110 ESMAHYNIYYQPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGH 169 + +YYQP ++ + G + + +S S+ I + L Sbjct: 673 VEAGQFQLYYQPQVVGESHRLTGAEALLRWHHSRRGMV-PPSEFIPLAEETGLILPLGQW 731 Query: 170 INKLFSPIKNNL-----PHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFS 224 + + + +N++ I D + L + G RL L+ + Sbjct: 732 VLETACAQLATWASQPEMAQLTVAVNVSAHQIRQTDFVDQVLAVLADAGANPQRLKLELT 791 Query: 225 TKEELYIIRRYQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIES 284 + + + + +++ V SL+DFG GY+ LS+L+ +P + + ++ +++ + Sbjct: 792 ESLLVSNVEDIIAKMTLLKSRGVGFSLDDFGTGYSSLSYLKRLPLDQLKIDQSFVNEVLT 851 Query: 285 NSLTDIIATTIIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVR 344 ++ IA I+ L++ L + VIA+G+ET++Q ++ E G +G S PLP F + Sbjct: 852 DANDAAIAKMIVALAESLGLAVIAEGVETEEQRNFLAESGCHAYQGYLFSKPLPLAGFEQ 911 Query: 345 KL 346 + Sbjct: 912 WI 913 >UniRef50_B8DLV2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfovibrio vulgaris str. 'Miyazaki F' RepID=B8DLV2_DESVM Length = 896 Score = 499 bits (1287), Expect = e-140, Method: Composition-based stats. Identities = 66/356 (18%), Positives = 134/356 (37%), Gaps = 13/356 (3%) Query: 1 MNTIKIKLNLIDYDSIVNIEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIKT-VSCQ 59 + + + L D +E +++ LL++ V E S+ + Sbjct: 536 VGGDEFVVVLQD------VEGERDAAQVAERLLARFTDPVRVQEHELFVGASVGIALFPD 589 Query: 60 KMKLYKKLNVKSDLTLWRDVFLRFKAY-LQPKNIICDNFNSSVLPVVSSKGESMAHYNIY 118 L +D+ + R + Y L + L + + + Sbjct: 590 DGDDPDTLVRNADIAMSRAKEQGKRRYHLFTPAMNDRAVRRLSLEGDLHRALAAGDITAH 649 Query: 119 YQPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINKLFSP-- 176 YQP + G I G + +DGS ++ I + + L H+ +L Sbjct: 650 YQPRVDLNTGLITGMEALARWIRADGSQEHP-AEFIPLAESTGLIVPLGEHMLRLACAKT 708 Query: 177 --IKNNLPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRR 234 + + + +N++ ++ + G L L+ + + + Sbjct: 709 RALCDAGHADLHVAVNLSVHQFRHRNLVGMVADVLAETGLPPHLLELEITESTIVTDVDH 768 Query: 235 YQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATT 294 L ++ + LS++DFG GY+ L L+N+P + + + ++ DI + IA T Sbjct: 769 TIRKLNQLAEMGIALSVDDFGTGYSSLYQLKNLPLTSLKIDRSFIRDIPDDPNDAAIAAT 828 Query: 295 IIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLLASL 350 II ++ +L + V+A+G+ET +Q +++ G ++G S PLP D F L Sbjct: 829 IITMADRLGLRVVAEGVETPEQLNFLLLEGCHEVQGFLFSRPLPPDEFTALLARGR 884 >UniRef50_Q12GF0 Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) n=3 Tax=Polaromonas RepID=Q12GF0_POLSJ Length = 989 Score = 498 bits (1285), Expect = e-140, Method: Composition-based stats. Identities = 66/360 (18%), Positives = 138/360 (38%), Gaps = 18/360 (5%) Query: 1 MNTIKIKLNLIDYDSIVNIEFPCLLSE----IEIELLSQLLKGYSVNEISKRRNRSIKTV 56 + + + L D + P + + ++L+ L + Y + SI Sbjct: 635 LGGDEFVVMLQDLGT-----QPEAATRKAQIVAEKVLATLREPYDLAGYQHYSTSSIGVT 689 Query: 57 SCQ-KMKLYKKLNVKSDLTLWRDVFLRFKAYLQPK-NIICDNFNSSVLPVVSSKGESMAH 114 + +L ++DL +++ + ++ ++ L G Sbjct: 690 PFNARQGSVSELLKQADLAMYQAKTMGRNTVCFFDPDMQASVSANAALSTDLRAGLREHQ 749 Query: 115 YNIYYQPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINKLF 174 + ++YQP + + I G + + K+ + ++ I + L + + Sbjct: 750 FLVHYQPQVD-REQRITGVEALLRWKHPQRGMVSP-AEFIPVAEETGLILPLGQWVLEQA 807 Query: 175 SPIKNNLPH-----GFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEEL 229 G I +N++ D + IK G + L L+ + Sbjct: 808 CLQLAVWQKRPETAGLSIAVNVSVRQFRHPDFVDMVMAAIKHTGIQPHNLKLELTESLLA 867 Query: 230 YIIRRYQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTD 289 + + + ++ V L+L+DFGMGY+ LS+L+ +P + + K+ D+ S+ Sbjct: 868 DRMEIAIAKMGTLKALGVTLALDDFGMGYSSLSYLKRLPLDQLKIDKSFIADVFSDPNDA 927 Query: 290 IIATTIIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLLAS 349 I + II L++ L +DVIA+G+ET+ Q ++ G Y +G PLP F + + Sbjct: 928 AICSAIISLAQSLGLDVIAEGVETEAQRSFLAGLGCGYYQGFLFCPPLPIAEFEAFMQGA 987 >UniRef50_A4TX60 PAS:GGDEF n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4TX60_9PROT Length = 961 Score = 498 bits (1285), Expect = e-140, Method: Composition-based stats. Identities = 52/350 (14%), Positives = 129/350 (36%), Gaps = 7/350 (2%) Query: 7 KLNLIDYDSIVN-IEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIKTV-SCQKMKLY 64 +L ++ ++N + + E+ ++ + ++ S+ + + Sbjct: 611 RLGGDEFVIVLNAVRDADGVVEVAEKIHKSVAPPITIEGQEVTSTLSMGIAMFPEDGHDF 670 Query: 65 KKLNVKSDLTLWRDVFLRFKAYLQPKN-IICDNFNSSVLPVVSSKGESMAHYNIYYQPIY 123 L K+D ++ Y + D L + + +Y+QP Sbjct: 671 DTLMKKADAAMYHAKESGRSTYRFFAARMNADAVAHLALRSGLHRALERGEFQLYFQPQV 730 Query: 124 NAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINKLFSPIKNNLPH 183 + G + G + I + + + ++ I + + + + + Sbjct: 731 SLTGGAVVGAEALIRWNHPERGLVSP-AEFIPVAEDSGLIVPMGDWVLRQACRQAALWQA 789 Query: 184 G---FFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSLR 240 G + +N++ D+ER ++ G L L+ + + R Sbjct: 790 GGHALTMAVNLSALQFRRGDLERAVREALEESGLAPHSLELELTESIMIQDHEAVMDMTR 849 Query: 241 RIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSK 300 R+ V LS++DFG GY+ +++L+ + + ++ D+ +++ I II ++ Sbjct: 850 RLGALGVQLSIDDFGTGYSSMAYLKRFAVDKLKIDQSFVRDVHTDTDNAAITQAIIQMAH 909 Query: 301 QLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLLASL 350 L ++VIA+G+E + ++ + G +G P+ A F + +L Sbjct: 910 SLKLEVIAEGVEVTEVVEFLRDHGCDLAQGFLYGRPMTAQRFEKTVLDGP 959 >UniRef50_A1RPJ9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=16 Tax=Proteobacteria RepID=A1RPJ9_SHESW Length = 1511 Score = 498 bits (1284), Expect = e-139, Method: Composition-based stats. Identities = 58/359 (16%), Positives = 140/359 (38%), Gaps = 9/359 (2%) Query: 2 NTIKIKLNLIDYDSIVN-IEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIKT-VSCQ 59 +L ++ I+ + + I ++L + + + S + SI + Sbjct: 1153 GDTVARLGGDEFTIILEGVAKTKAATLISEKVLRAFQTPFLLEDKSLTISTSIGISLYPN 1212 Query: 60 KMKLYKKLNVKSDLTLWRDVFLRFK-AYLQPKNIICDNFNSSVLPVVSSKGESMAHYNIY 118 L +D ++ L + +L + ++ Sbjct: 1213 DADNADSLIKFADTAMYHAKSLGRNNFQFYTHKLNEIATRHVLLEAGLKQAIHRNELSLV 1272 Query: 119 YQPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHI----NKLF 174 YQP ++ ++G++ G + + +++ + + I ++ + + + Sbjct: 1273 YQPKFSLRDGSLTGLEALLRWHHTELGPISP-VEFIPLAEETGIINQIGHWVINHACQQL 1331 Query: 175 SPIKNNLPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRR 234 + + + +N++ + DI + V G L L+ + + + Sbjct: 1332 AEWNALGFNNISMAVNLSARQLK-ADIISTIEVALAVSGLPAQSLELELTESMIMGNPQD 1390 Query: 235 YQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATT 294 S L +++ + ++++DFG GY+ LS+L+ P + + + DI ++ I + Sbjct: 1391 SVSILSKLKALGLTIAIDDFGTGYSSLSYLKRFPIDTLKIDREFVRDITNDPDDAAITSA 1450 Query: 295 IIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLLASLKQV 353 II L+ L ++V+A+G+ET+ Q ++ +G ++G LS PL A + L KQ+ Sbjct: 1451 IIALAHSLELNVVAEGVETQAQLNFLGLQGCDEVQGFLLSKPLSAKDCLTLLGNQSKQL 1509 >UniRef50_A4U3H4 PAS:GGDEF n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4U3H4_9PROT Length = 904 Score = 497 bits (1282), Expect = e-139, Method: Composition-based stats. Identities = 64/351 (18%), Positives = 138/351 (39%), Gaps = 9/351 (2%) Query: 1 MNTIKIKLNLIDYDSIVNIEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIKTVSCQK 60 + + + L+D + E + I ++++ L + YS+N SI Sbjct: 551 LGGDEFLVLLVDLARTES-EAANQVEAIGLKIIEALSQPYSLNNQHYVCTPSIGATLFFG 609 Query: 61 MKLYKKLNVKSDLTLWRDVFLRFKA-YLQPKNIICDNFNSSVLPVVSSKGESMAHYNIYY 119 + L +SDL +++ + + + + + +G + ++Y Sbjct: 610 HVVADDLLKQSDLAMYKAKAEGGASIHFFDPKMEEAVIKRAKIEADLRQGLIKKQFLLHY 669 Query: 120 QPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINKLFSPIKN 179 QP NG + G + + ++ SD I + L + + Sbjct: 670 QPQI-FSNGRMTGVEALVRWQHPVRGLV-PPSDFIPLAEETGLILQLGNWVLEAACKQLA 727 Query: 180 NL-----PHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRR 234 + +N++ + + I+V G RL L+ + ++ Sbjct: 728 EWATRPELADLTVAVNVSVQQFHQPEFVDHIQEVIRVTGANPERLKLELTESMLAENVQD 787 Query: 235 YQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATT 294 + ++ + + SL+DFG GY+ LS+L+ +P + + ++ D+ ++ IA T Sbjct: 788 IIKKMFALKADGIGFSLDDFGTGYSSLSYLKQLPLDQLKIDQSFVRDVLTDPSDATIAKT 847 Query: 295 IIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRK 345 I++L++ L + VIA+G+ET+ Q ++ G +G S PLP + F Sbjct: 848 IVNLAQSLGLSVIAEGVETEAQRNFLETSGCHSCQGYFFSRPLPIEEFEEY 898 >UniRef50_Q21SZ9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Proteobacteria RepID=Q21SZ9_RHOFD Length = 1169 Score = 497 bits (1282), Expect = e-139, Method: Composition-based stats. Identities = 60/356 (16%), Positives = 137/356 (38%), Gaps = 12/356 (3%) Query: 1 MNTIKIKLNLIDYDSIVNIEFPC-LLSEIEIELLSQLLKGYSVNEISKRRNRSIKT-VSC 58 + + + L + ++E + +L+ L + YS++ + SI + Sbjct: 817 LGGDEFVVMLENLSE--HLEAAATQAETLAKRILASLKQTYSLDGYEYQSTASIGITLFS 874 Query: 59 QKMKLYKKLNVKSDLTLWRDVFLRFKAYLQPK-NIICDNFNSSVLPVVSSKGESMAHYNI 117 ++ + + L ++DL +++ + + + + L + + + + Sbjct: 875 EQQETTEDLLKRADLAMYQAKAVGRNTLRFFDPEMQAVVTSRAALEAGLRRAVTSDEFLL 934 Query: 118 YYQPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINKLFSPI 177 YYQ + + G++ GC+ + ++ + A + I + + L + Sbjct: 935 YYQAQVDGQ-GHLTGCEALLRWQHPERGLVAP-GEFIALAEDTGLILPLGRWVLDAACTQ 992 Query: 178 KNNL-----PHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYII 232 + +N++ D + L + GT RL L+ + + + Sbjct: 993 LAQWATRPEMAHLTVAVNVSVRQFHQADFVNQVLTVLDSTGTNPQRLKLELTESLLIGDV 1052 Query: 233 RRYQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIA 292 + + ++ V SL+DFG GY+ LS+L+ +P + + + +I + IA Sbjct: 1053 EDVIAKMSILKEKGVGFSLDDFGTGYSSLSYLKRLPLDQLKIDQGFVRNILIDPNDAAIA 1112 Query: 293 TTIIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLLA 348 +I L L + VIA+G+E + Q ++ G +G PLP D F + Sbjct: 1113 RMVIALGDSLGLAVIAEGVEIEAQRDFLARLGCHACQGYLFCRPLPLDQFEAFVRR 1168 >UniRef50_B4W545 PAS fold family n=1 Tax=Microcoleus chthonoplastes PCC 7420 RepID=B4W545_9CYAN Length = 709 Score = 497 bits (1282), Expect = e-139, Method: Composition-based stats. Identities = 65/360 (18%), Positives = 139/360 (38%), Gaps = 16/360 (4%) Query: 1 MNTIKIKLNLIDYDSIVNIEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIKTVSCQK 60 ++ + + L D I + + + + + L +++N + SI Sbjct: 357 LSGDEFTILLEDIKDIKD------ATRVAERIQATLKAPFNLNNHEVFTSASIGIALSST 410 Query: 61 M-KLYKKLNVKSDLTLWRDVFLRFKAYLQP-KNIICDNFNSSVLPVVSSKGESMAHYNIY 118 + + + +D+ ++R L + K + L + + +Y Sbjct: 411 GYERSEDILRDADIAMYRAKELGKARHEIFDKIMHARALELLRLENDLRRALERQEFEVY 470 Query: 119 YQPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINKLFSPIK 178 YQPI + G + G + + ++ + + ++ I + + L + Sbjct: 471 YQPITSLVTGMLTGFEALVRWRHPELGLVSP-AEFIPVAEDTGLIIPLGEWVLHEACRQL 529 Query: 179 NNL------PHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYII 232 P +++N++ + I D+ + H + G + L L+ + + Sbjct: 530 RMWHTQFPTPEPLKMSVNLSGKQIKEPDLIEQIDHILAETGLDGSFLKLEITESILMENA 589 Query: 233 RRYQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIA 292 L ++R N+ LS++DFG GY+ LS+L P + + + ++ + + I Sbjct: 590 ETVTKMLLQLRARNIQLSVDDFGTGYSSLSYLHRFPVNTLKIDRSFVSKMNPKNRNTEII 649 Query: 293 TTIIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLLASLKQ 352 TII L+ L +DVIA+G+ET +Q + + +G S PL A LL + Q Sbjct: 650 RTIITLAHSLRMDVIAEGVETLEQLTELKLLNCEQGQGYLFSKPLTKCA-AGLLLGGIPQ 708 >UniRef50_Q7NYX4 Putative uncharacterized protein n=1 Tax=Chromobacterium violaceum RepID=Q7NYX4_CHRVO Length = 795 Score = 497 bits (1282), Expect = e-139, Method: Composition-based stats. Identities = 64/359 (17%), Positives = 138/359 (38%), Gaps = 13/359 (3%) Query: 1 MNTIKIKLNLIDYDSIVNIEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIKT-VSCQ 59 + + L + +DS L+++ ++L+ L K + SI V Sbjct: 441 LGGDEFTLLMSGFDSH------HQLADMASDILAALGKPLCLEAHEVFITGSIGISVFPH 494 Query: 60 KMKLYKKLNVKSDLTLWRDVFLRFKAYLQPK-NIICDNFNSSVLPVVSSKGESMAHYNIY 118 + + L +D+ ++R Y + F +L + ++ Sbjct: 495 DGRDARTLLKNADVAMYRAKEAGKNTYQFFDIGMNTQTFERLLLENGLRMALERHEFELH 554 Query: 119 YQPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINKLFSPIK 178 YQP +A +AG + + ++ + I + + + + Sbjct: 555 YQPQLSAGERALAGAEALLRWRHPQLGLV-PPARFIALAEETGLIKPIGDWVLREACRQL 613 Query: 179 NNLP-HGFFI---TININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRR 234 G + +N++P + + ++ G RL L+ + + Sbjct: 614 AAWDAQGLRVPRLAVNLSPRQFGQPSLPAKVAGALQAAGLAAGRLELEITESMIMQSPTE 673 Query: 235 YQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATT 294 S L +++ V+LS++DFG GY+ LSHL+ P + + ++ + + IA Sbjct: 674 AVSLLSELKSLGVWLSIDDFGTGYSSLSHLKRFPLDTLKIDQSFVEGLPDDDDNAAIAEA 733 Query: 295 IIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLLASLKQV 353 I+ ++K+L V+A+G+E+++QA ++ +G L+G PLPA F ++ Sbjct: 734 ILAMAKKLKFQVVAEGVESEEQAAFLEGKGCHVLQGYHFGRPLPAGEFAALAAGWRREA 792 >UniRef50_A1K2X7 GGDEF/EAL/PAS/PAC/GAF-domain containing protein n=1 Tax=Azoarcus sp. BH72 RepID=A1K2X7_AZOSB Length = 1070 Score = 497 bits (1281), Expect = e-139, Method: Composition-based stats. Identities = 56/346 (16%), Positives = 121/346 (34%), Gaps = 12/346 (3%) Query: 2 NTIKIKLNLIDYDSIVNIEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIK-TVSCQK 60 + + L D I L + L + + +++ S SI ++ + Sbjct: 723 GGDEFVVLLPDLG------DERDAFRILGRLQAALAEPFRLDDRSFFVTCSIGVSLYPRD 776 Query: 61 MKLYKKLNVKSDLTLWRDVFLRFKAYLQPKN-IICDNFNSSVLPVVSSKGESMAHYNIYY 119 L +D+ +++ + + L ++ + Sbjct: 777 GGDGDTLLKHADIAMYQAKAAGRNVVRFFTAEMNIQVRDRLQLEGALRSALENGELHLAF 836 Query: 120 QPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINKLFSPIKN 179 QP + +G + G + + ++ + A I + + + + Sbjct: 837 QPQVDGGSGQVIGAEALLRWQHPELGAV-PPVRFIPLAEETGLIGPIGEWVLRAACRQAR 895 Query: 180 NLPHG---FFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQ 236 I +N++ + D+ + G L L+ + + + + Sbjct: 896 QWEQAGRRLRIAVNVSARQFRSPDLPARIAEILDETGLPPALLELELTESMLMGDAEQAE 955 Query: 237 SSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTII 296 L R++ V L+L+DFG GY+ ++LQ P + + ++ + + + I II Sbjct: 956 EMLHRLKQLGVSLALDDFGTGYSSFAYLQRFPIDTLKIDQSFVRSMVAGVRGEAIVVAII 1015 Query: 297 DLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAF 342 L+ L + VIA+G+ET Q + E G L+G P+PA F Sbjct: 1016 ALAHSLGMRVIAEGVETPLQQRQLFEFGCDELQGYLFGRPVPAAEF 1061 >UniRef50_B1Y2A0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Leptothrix cholodnii SP-6 RepID=B1Y2A0_LEPCP Length = 810 Score = 497 bits (1281), Expect = e-139, Method: Composition-based stats. Identities = 58/360 (16%), Positives = 140/360 (38%), Gaps = 10/360 (2%) Query: 1 MNTIKIKLNLIDYDSIVNIEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIKTVSCQK 60 + + + + D + ++ E + ++L L + Y ++ + SI Sbjct: 453 LGGDEFVVIVQDLGARLD-ECATQAEGVGEKILDALNQPYPLDGHVRHSTPSIGITLFAD 511 Query: 61 MKL-YKKLNVKSDLTLWRDVFLRFKAYLQPKN-IICDNFNSSVLPVVSSKGESMAHYNIY 118 + L ++D+ +++ + + L + ++H+ ++ Sbjct: 512 DRDSVDDLLKEADMAMYQAKTAGRNTLRFFDADMQAMLVQRAALEEDMRESMRLSHFLLH 571 Query: 119 YQPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINKLFSPIK 178 YQP +G I G +V + + ++ I + N ++ L + + Sbjct: 572 YQPQV-VGSGRITGAEVLLRWPHPLRGLV-PPAEFIPLAEDTNLITALGHWVLETACKTL 629 Query: 179 NNL-----PHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIR 233 + +++N++ E + ++ G + L L+ + + + Sbjct: 630 ADWSAQDDMKHLSVSVNVSARQFRQPHFVAEVMSILERTGADPHLLKLELTESLLVEDVE 689 Query: 234 RYQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIAT 293 + + +++ V SL+DFG GY+ L+HL+ +P + + ++ DI ++ I Sbjct: 690 DIVAKMSALKSRGVGFSLDDFGTGYSSLAHLKRLPLDQLKIDQSFVRDILTDPNDLAIGR 749 Query: 294 TIIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLLASLKQV 353 ++ L+ L + VIA+G+E Q + + G +G S PLP + F A+ + V Sbjct: 750 MVVALADSLGLTVIAEGVELAAQRELLAQIGCDAYQGYLFSRPLPREPFEACCRAARQAV 809 >UniRef50_A1KAZ1 Hypothetical signaling protein n=1 Tax=Azoarcus sp. BH72 RepID=A1KAZ1_AZOSB Length = 952 Score = 497 bits (1281), Expect = e-139, Method: Composition-based stats. Identities = 65/355 (18%), Positives = 131/355 (36%), Gaps = 14/355 (3%) Query: 1 MNTIKIKLNLIDYDSIVNIEFPCLLSEIEIELLSQLLKGYSV-NEISKRRNRSIKTV-SC 58 + + + L ++E P + + L+ L +++ N SI Sbjct: 603 LGGDEFMVLLE------HVEAPADAAVVAKNLVEVLAAPFALSNGHEVFIRASIGISFYP 656 Query: 59 QKMKLYKKLNVKSDLTLWRDVFLRFKAY-LQPKNIICDNFNSSVLPVVSSKGESMAHYNI 117 + L +D ++R Y +++I L + + + Sbjct: 657 DDGDDFMTLVRNADAAMYRAKAQGRNTYGFYTEDLIRSATERLALETRLRRALEHDEFVV 716 Query: 118 YYQPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHI----NKL 173 YYQP+ K+G + G + + K G + I + L + + Sbjct: 717 YYQPVLGVKDGRLLGAEALVRWK-PQGEPMVSPAAFIPVAEETGLIVALGEWVLRDACRQ 775 Query: 174 FSPIKNNLPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIR 233 + + +N++ E D+ + G +L L+ + L Sbjct: 776 VREWIDAGYAFGQVAVNLSAEQFRRQDVSAMLATVLAETGLPATQLELEITESSLLEAGE 835 Query: 234 RYQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIAT 293 L R++ V L+++DFG GY+ L++L+ + + ++ DI +S IA+ Sbjct: 836 HAVGLLERLKQQGVGLAIDDFGTGYSSLAYLKRFSIDKLKIDRSFVQDIADDSNDLAIAS 895 Query: 294 TIIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLLA 348 I+ +++ L + V A+G+E + Q + G +G S PLPAD F + L Sbjct: 896 AIVAMARALDMAVQAEGVEGEAQLELLRGLGCGSYQGYLCSPPLPADEFEARFLR 950 >UniRef50_B6AQA1 Diguanylate cyclase/phosphodiesterase n=2 Tax=Leptospirillum sp. Group II RepID=B6AQA1_9BACT Length = 702 Score = 497 bits (1280), Expect = e-139, Method: Composition-based stats. Identities = 58/354 (16%), Positives = 124/354 (35%), Gaps = 8/354 (2%) Query: 2 NTIKIKLNLIDYDSIV-NIEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIKT-VSCQ 59 ++ ++ + + P + EI ++ + + V+ S SI + Sbjct: 336 EDTVARIGGDEFVIVFPEQKDPGKVHEIARKIRDCVAENMEVDGQSLSVTTSIGISLFPH 395 Query: 60 KMKLYKKLNVKSDLTLWRDVFLR-FKAYLQPKNIICDNFNSSVLPVVSSKGESMAHYNIY 118 ++ L +D ++ + + + +G + +Y Sbjct: 396 DGTTFRTLLASADSAMYYAKSKGSGQIQFYSGELNDSAALRIEMENDLRRGIEKEEFVLY 455 Query: 119 YQPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHI----NKLF 174 YQP G + + + + + I + L I + Sbjct: 456 YQPKVTLATGEVESVEALVRWNHPEKG-ILPPHYFIPRAEETGLIIPLGRWIMDRACREA 514 Query: 175 SPIKNNLPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRR 234 + + +N++ + D+ +E L ++ G L L+ + + Sbjct: 515 VIWQQAGFSRLRVAVNLSALQFINQDLMKEILDALESSGLPPECLELEITESLLMEDPEG 574 Query: 235 YQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATT 294 +L IR V+++++DFG GY+ S+L+ P + + ++ DI N I T Sbjct: 575 AMRTLSGIRQKGVHVAIDDFGTGYSSFSYLKKFPLDRLKIDRSFITDICDNPNDAAIVRT 634 Query: 295 IIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLLA 348 II L L++ VIA+G+E++ Q + +G S PLP +L Sbjct: 635 IITLGHNLNLKVIAEGVESQAQLEMLKAMECDAYQGFFNSRPLPPGELAERLKE 688 >UniRef50_A1K569 EAL/GGDEF/PAS/PAC-domain containing signalling protein n=1 Tax=Azoarcus sp. BH72 RepID=A1K569_AZOSB Length = 947 Score = 497 bits (1280), Expect = e-139, Method: Composition-based stats. Identities = 51/355 (14%), Positives = 129/355 (36%), Gaps = 13/355 (3%) Query: 2 NTIKIKLNLIDYDSIVNIEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIKT-VSCQK 60 + + L + I + + +++ + V SI ++ Sbjct: 589 GGDEFVMLLAE------ITDRAVAANRAAQIIDAFSTPFRVEHYELSVTPSIGIAIAPDD 642 Query: 61 MKLYKKLNVKSDLTLWRDVFLRFKAYLQP-KNIICDNFNSSVLPVVSSKGESMAHYNIYY 119 L +D ++ Y + L + + S + ++Y Sbjct: 643 GVDADTLLRNADAAMYHAKESGRNTYRFFTDEMSLRVRERLELENLLRQAMSRDEFEVFY 702 Query: 120 QPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINKLFSP--- 176 QP + + I GC+ + ++ + A + I + + + + + Sbjct: 703 QPQFGLSDHRILGCEALVRWRHPERGLIAPE-RFIPLAEDTGLIVAIGRRVLETACHTAQ 761 Query: 177 -IKNNLPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRY 235 + + +N +P I + + G L ++ + + Sbjct: 762 GWRAAGLGDIPVAVNASPVQIHHGNFAETVAEVLAETGLPARLLEIELTESTLMADAAPV 821 Query: 236 QSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTI 295 ++L +++ V L+++DFG GY+ L++L+ + + ++ +D+ + I I Sbjct: 822 AATLAALQDMGVRLAIDDFGTGYSSLAYLKRFQLDKLKIDRSFINDLPGDPDDANITVAI 881 Query: 296 IDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLLASL 350 I +++ L + VIA+G+ET Q +++++G +G S P+P ++ L + Sbjct: 882 IGIARSLGMSVIAEGVETAAQERFLVDQGCAEGQGYLFSPPVPVESMTALLATAR 936 >UniRef50_Q89HX5 Bll5864 protein n=1 Tax=Bradyrhizobium japonicum RepID=Q89HX5_BRAJA Length = 799 Score = 497 bits (1280), Expect = e-139, Method: Composition-based stats. Identities = 62/348 (17%), Positives = 125/348 (35%), Gaps = 4/348 (1%) Query: 2 NTIKIKLNLIDYDSIVNIEFPCLLSE-IEIELLSQLLKGYSVNEISKRRNRSIKT-VSCQ 59 + +L ++ + + + L+ + Y +++ SI +S Q Sbjct: 444 SDTVARLGGDEFAVVQIGRSEEAAARCLAGRLVEVISAPYEIDDHQIVIGVSIGISLSPQ 503 Query: 60 KMKLYKKLNVKSDLTLWRDVFLRFKAYLQPKN-IICDNFNSSVLPVVSSKGESMAHYNIY 118 +L +DL L+R Y + + +L + + Y Sbjct: 504 DGSNADELLKNADLALYRAKADGRGTYRFFETGMDARAQARRLLEMDLRAALQRDEFQPY 563 Query: 119 YQPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINKLFSPIK 178 YQPI + +G + + + + A + I + L + + Sbjct: 564 YQPIRDVASGRVVVFEALLRWNHPQRGLIAPIN-FIPLAEETGLIVQLGEFVLRSACTDA 622 Query: 179 NNLPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSS 238 P + +N++P ++ + V G RL L+ + L ++ Sbjct: 623 ATWPDDVDVAVNLSPVQFRNPNLIASVTAALTVSGLPARRLELEITESVLLQNSEATLTT 682 Query: 239 LRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDL 298 L +R V +SL+DFG GY+ LS+L++ PF + + ++ ++ + + I + L Sbjct: 683 LHELRAMGVRISLDDFGTGYSSLSYLRSFPFDKIKIDRSFVSELATREDSMAIIRAVTGL 742 Query: 299 SKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKL 346 + L I A+G+E Q + G +G S P PA L Sbjct: 743 GRSLGIVTTAEGVENDAQLELLRREGCTQAQGYLFSKPRPASDVALML 790 >UniRef50_Q2YCL1 Diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(S) n=2 Tax=Nitrosospira multiformis ATCC 25196 RepID=Q2YCL1_NITMU Length = 1054 Score = 496 bits (1279), Expect = e-139, Method: Composition-based stats. Identities = 59/354 (16%), Positives = 139/354 (39%), Gaps = 10/354 (2%) Query: 1 MNTIKIKLNLIDYDSIVNIEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIKTVSCQK 60 + + + L+ + E +S I + S ++ ++++ SI Sbjct: 697 LGGDEFVVILMGDFGEDHDEALTQISTICERIRSAFIQPFNLDPYIHHITPSIGIALFND 756 Query: 61 -MKLYKKLNVKSDLTLWRDVFLRFKAYLQPKNIICDNFN-SSVLPVVSSKGESMAHYNIY 118 + +L ++DL +++ A + N ++L K + ++ Sbjct: 757 QSQTTNELLKRADLAMYQAKASGRNAMRFFDPDMQAAMNARAILESELYKSWERNEFILH 816 Query: 119 YQPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINKLFSPIK 178 YQ + + I G + + ++ S+ I + L + + Sbjct: 817 YQLQVD--SRGIIGAEALVRWQHPRRGLL-PPSEFIPQAEETGLILPLGEWVLETACNQL 873 Query: 179 NNL-----PHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIR 233 + +++N++ D + + + G RL L+ + ++ + Sbjct: 874 ASWALQPETVQLNLSVNVSSLQFCQPDFVEQVISILDRTGANPQRLKLELTESILVHDMD 933 Query: 234 RYQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIAT 293 + + ++ V +L+DFG+GY+ L +L+ +P +V + ++ D+ +++ I Sbjct: 934 DTIAKMMTLKARGVGFALDDFGIGYSSLYYLKRLPLDWVKIDRSFVRDVLTDNNDATIVR 993 Query: 294 TIIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLL 347 TI+ L+K + + VIA+G+ET Q ++ G +G S PLP + F R + Sbjct: 994 TILLLAKSMGLAVIAEGVETGAQKDFLASHGCTAYQGYLFSRPLPLEQFERFVQ 1047 >UniRef50_C6XAG8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6XAG8_METSD Length = 950 Score = 496 bits (1279), Expect = e-139, Method: Composition-based stats. Identities = 64/350 (18%), Positives = 137/350 (39%), Gaps = 10/350 (2%) Query: 2 NTIKIKLNLIDYDSIVNIEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIK-TVSCQK 60 + + L + + E + ++L + + + SI T+ Q+ Sbjct: 595 GGDEFVVLLHELSG-NHQEAAAQARLVSEKILISFAHPFQFSGYEHHTSASIGVTLFDQQ 653 Query: 61 MKLYKKLNVKSDLTLWRDVFLRFKAYLQPK-NIICDNFNSSVLPVVSSKGESMAHYNIYY 119 ++ ++DL +++ + + + G + + Y Sbjct: 654 PTTVDEILKRADLAMYQSKAAGRNVIRFFDPEMQALIADRVEMEEDLRNGLRNDEFFLCY 713 Query: 120 QPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINKLFSPI-- 177 QP + G + G + + +N S I + + + + Sbjct: 714 QPQVD-NQGRLLGAEALLRWRNPKRGMI-PPSTFIPLAEDSGLIVSVGNWVMYAACKQLV 771 Query: 178 ---KNNLPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRR 234 + L + +N++ + + D + + + V G RL L+ + + I Sbjct: 772 LWAQQPLTSSLTLAVNVSAKQLRQMDFVDQIVEVLNVTGANPKRLKLELTESLMVNNIED 831 Query: 235 YQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATT 294 + + ++N V S++DFG+GY+ LS+L+ +P + + ++ D+ ++ +IA T Sbjct: 832 VIAKMTELKNIGVGFSIDDFGIGYSSLSYLKLLPLDQLKIDQSFVRDVLTDPNDAVIART 891 Query: 295 IIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVR 344 II L K L++ VIA+G+ET Q ++ G +G S P+PAD F R Sbjct: 892 IIALGKSLNLQVIAEGVETLSQREFLDNYGCDAYQGYLFSKPVPADEFER 941 >UniRef50_B7HSZ4 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor n=5 Tax=Bacillus cereus group RepID=B7HSZ4_BACC7 Length = 925 Score = 496 bits (1279), Expect = e-139, Method: Composition-based stats. Identities = 59/351 (16%), Positives = 134/351 (38%), Gaps = 15/351 (4%) Query: 2 NTIKIKLNLIDYDSIVNIEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIKT-VSCQK 60 + + L NI+ + ++ ++ + + + + SI + Sbjct: 584 GGDEFTIYLP------NIKSEKEVLKVVNRVIDSFSRPFHLVDNEIYMKTSIGISIFPDN 637 Query: 61 MKLYKKLNVKSDLTLWRDVF-LRFKAYLQPKNIICDNFNSSVLPVVSSKGESMAHYNIYY 119 + L +D +++ + + + F S L K IYY Sbjct: 638 GDTTEILVKNADTAMYKSKEISGSSYHFFSEGMDTRTFESIKLENDLYKALEQEELVIYY 697 Query: 120 QPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHI----NKLFS 175 QP N K I G + I + + D I + + + + Sbjct: 698 QPQINGKTNKIEGVEALIRWNHQEHGMIPPD-KFIPIAEETGLIVPIGEWVLKEACRQLK 756 Query: 176 PIKNNLPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRY 235 + +++N++ + D+ + ++ + L+ + + Sbjct: 757 KWHDQGSPLISMSVNLSARQLEQSDLFAMVKNVLEEVELSPKYIQLELTENLIVRNTEST 816 Query: 236 QSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTI 295 ++++++ + L+++DFG GY+ L +L+ +P S + + K+ D+ + I TI Sbjct: 817 LKTMKKLKGLGINLAIDDFGTGYSSLGYLKKLPISTLKIDKSFVQDMTKD--DAAITNTI 874 Query: 296 IDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKL 346 I L+K L++DVIA+G+ETK+Q ++ R ++G S P+ A+ + Sbjct: 875 ITLAKNLNLDVIAEGVETKEQVEFLSARNCYLMQGYFFSRPMAAEDIEKLF 925 >UniRef50_A4U4R0 Sensory box/GGDEF family protein n=3 Tax=Magnetospirillum RepID=A4U4R0_9PROT Length = 840 Score = 496 bits (1278), Expect = e-139, Method: Composition-based stats. Identities = 62/354 (17%), Positives = 131/354 (37%), Gaps = 9/354 (2%) Query: 3 TIKIKLNLIDYDSI-VNIEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIKT-VSCQK 60 +L ++ + N++ P S + +++ + + + ++E + SI + Sbjct: 482 DTVARLGGDEFAVVLTNLDDPEGASNVAESIIASISEPFGLDEHEVNTSTSIGITIFPDD 541 Query: 61 MKLYKKLNVKSDLTLWRDVFLRFKAYLQP-KNIICDNFNSSVLPVVSSKGESMAHYNIYY 119 + L +DL ++R Y + + V+ ++Y Sbjct: 542 AVDSEVLLKNADLAMFRSKAEGRNNYHFYVAEMDAEIQARKVVEHDLRVALGTDQLEMHY 601 Query: 120 QPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHI----NKLFS 175 QP+ K G + GC+ I K+ + + I + + L I Sbjct: 602 QPLIEMKTGEVVGCEALIRWKHPTRGWVSP-VEFIPIAERTDLIVPLGRWILHRSCLQGR 660 Query: 176 PIKNNLPHGFFITININPEDILTCD-IERECLHFIKVFGTERIRLVLQFSTKEELYIIRR 234 I +N++P + + G +L L+ + + + Sbjct: 661 DWARAGLPPQKIAVNLSPVQFKNHTALLAMIADILDQTGFPPDQLQLEITEGIAMQNVEA 720 Query: 235 YQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATT 294 LR++R+ V +S++DFG GY+ L++L+ P + + ++ DI + + Sbjct: 721 TVDVLRQLRDMGVLISIDDFGTGYSSLNYLKRFPVDKLKIDRSFVVDIGLHPDNAAVVNA 780 Query: 295 IIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLLA 348 I+ L L V +G+ET +Q ++ GV +G + LP D F R + Sbjct: 781 IVTLGHSLGTRVNVEGVETIEQLDFLKAHGVDEAQGFYFAKALPPDEFARFVRE 834 >UniRef50_Q4ZMU9 PAS:GGDEF n=4 Tax=Pseudomonas syringae group RepID=Q4ZMU9_PSEU2 Length = 972 Score = 496 bits (1278), Expect = e-139, Method: Composition-based stats. Identities = 55/358 (15%), Positives = 138/358 (38%), Gaps = 9/358 (2%) Query: 2 NTIKIKLNLIDYDSIV--NIEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIKTV-SC 58 N++ +L ++ +V ++ L+ + ++ L K +++ + S+ Sbjct: 605 NSVVARLGGDEFSIVVTHSVYSESLIKSLATHVVEALGKPFNLGGQDIFVSASVGIANYP 664 Query: 59 QKMKLYKKLNVKSDLTLWRDVFLRFKAYLQPKNIICDNF-NSSVLPVVSSKGESMAHYNI 117 + + +D +++ + + ++ + + + Sbjct: 665 FDGRDTGVILKNADTAMYQAKKSGRNNFKFYNARMNESLTRRLQTETLLRGALERDEFIL 724 Query: 118 YYQPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINKLFSPI 177 ++QP + +G I+G + + + + + +D I + + + + + Sbjct: 725 HFQPKVSLTDGRISGLEALLRWNHPEQGMVSP-ADFIPILEDTGLIIPVGVWVIRKVCET 783 Query: 178 KNNLPHG----FFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIR 233 I IN++ + + H ++ +G L + + + Sbjct: 784 LKRWEENHIRLVPIAINLSVRQLQVKGLAETVKHIVEAYGINPALLEFELTESMLMIDPE 843 Query: 234 RYQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIAT 293 LR I++ + LS++DFG GY+ L++L+ P + + + DI SN I Sbjct: 844 SAVEILRDIKSYGISLSVDDFGTGYSSLAYLKRFPLDALKIDRAFIKDITSNHEDAAITR 903 Query: 294 TIIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLLASLK 351 +I L+ +L ++VIA+G+ET Q ++ G ++G S P+ +D + +S Sbjct: 904 AVIVLAHELGLNVIAEGVETVDQLELLVTYGCDQMQGYLFSKPVISDECAAMIKSSRS 961 >UniRef50_C8SP12 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Mesorhizobium opportunistum WSM2075 RepID=C8SP12_9RHIZ Length = 894 Score = 496 bits (1278), Expect = e-139, Method: Composition-based stats. Identities = 57/357 (15%), Positives = 141/357 (39%), Gaps = 12/357 (3%) Query: 1 MNTIKIKLNLIDYDSIVNIEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIKTV-SCQ 59 + + L L D V++ ++E +L + + + + + R SI + Sbjct: 544 LGGDEFVLVLSDQPKNVDL-----IAETLQKLRTAIAEPLQLGDHCVRATASIGIATYPK 598 Query: 60 KMKLYKKLNVKSDLTLWRDVFLRF-KAYLQPKNIICDNFNSSVLPVVSSKGESMAHYNIY 118 K + L +D ++R + +L + + + ++ Sbjct: 599 DGKAPESLVANADAAMYRAKAVGRDNFQFYAPEFNTRAHERFLLQEELRTALARSQFELF 658 Query: 119 YQPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHI----NKLF 174 YQP + ++ I + I + A A I + + + + Sbjct: 659 YQPQIDLRSVQIVAVEALIRWNHPAHGAMAPVG-FIPTAEETGLIVPIGDWVLHEACRQN 717 Query: 175 SPIKNNLPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRR 234 ++ +++N++ ++ +H + E L L+ + + + Sbjct: 718 KAWQDLGLEPITVSVNVSARQFSEKNLVERVVHALSESDLEGCYLELELTESLIMQDVGL 777 Query: 235 YQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATT 294 +++ ++++ V +S++DFG GY+ LS L+ P + + + K+ D+ +N +A+ Sbjct: 778 AVTTMNKLQSLGVQISIDDFGTGYSSLSALKTFPIARLKIDKSFIDDVATNEDDQAVASA 837 Query: 295 IIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLLASLK 351 +I L ++L + VIA+G+ET +Q ++ + ++G S P+ + R L + + Sbjct: 838 VISLGQKLKMRVIAEGVETDEQVAFLRKNNCDEMQGYHFSKPVCSREIERLLESRSR 894 >UniRef50_C3X2S2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Oxalobacter formigenes RepID=C3X2S2_OXAFO Length = 1049 Score = 496 bits (1278), Expect = e-139, Method: Composition-based stats. Identities = 53/346 (15%), Positives = 132/346 (38%), Gaps = 7/346 (2%) Query: 7 KLNLIDYDSIVNIEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIKTV-SCQKMKLYK 65 +L ++ ++ + + LL+ + Y++ SI + Sbjct: 696 RLGGDEFVLVLPGTDTDGAAYLAERLLNIAARQYNIERHEINLTVSIGIAMYPTDGTDFD 755 Query: 66 KLNVKSDLTLWRDVFLRFKAYLQPK-NIICDNFNSSVLPVVSSKGESMAHYNIYYQPIYN 124 L +D ++R Y + + + + + +++ YQP + Sbjct: 756 TLWRSADAAMYRAKQSGRNDYCFFTTEMQARSARTLQIDNALRRALERNQFSLVYQPQLS 815 Query: 125 AKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHIN----KLFSPIKNN 180 I G + I + + I ++ ++ + + + ++N Sbjct: 816 LNTNRIVGFEALIRWTHPQFGN-TPPDEFIPIAESNGQIIPIGEWVLKTAVRQLRLWQDN 874 Query: 181 LPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSLR 240 I++N++ + + ++ G L L+ + + + + Sbjct: 875 GLKDVTISVNLSAVQFRHPRLPELVMAILEEAGVSPECLQLELTEGVAMENPLAAITVID 934 Query: 241 RIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSK 300 +R + +S++DFG GY+ L++L+ + + ++ D+ +++ I + +I L+ Sbjct: 935 ELRKKGIRISIDDFGTGYSSLTYLKRFNVYSLKIDRSFVQDLPNDTEDMAIVSAVISLAD 994 Query: 301 QLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKL 346 L + +A+G+ETK+Q ++ RG ++G LS PL ADA + Sbjct: 995 SLGMITVAEGVETKEQLEFLRSRGCTEIQGYYLSRPLQADAVFSFI 1040 >UniRef50_B0CAC5 Diguanylate cyclase/phosphodiesterase n=7 Tax=cellular organisms RepID=B0CAC5_ACAM1 Length = 901 Score = 496 bits (1278), Expect = e-139, Method: Composition-based stats. Identities = 58/356 (16%), Positives = 130/356 (36%), Gaps = 13/356 (3%) Query: 2 NTIKIKLNLIDYDSIVNIEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIKT-VSCQK 60 + + L IE +L L + + SI + + Sbjct: 529 GGDEFTVLLPK------IESVNDAINTAYRILDALKAAFVIRRHELFVTTSIGIAIYPED 582 Query: 61 MKLYKKLNVKSDLTLWRDVFLRFKAYLQPKNIICDNFNSSVLPVVSSKGESMAHYNIYYQ 120 + + L +D+ L+R + +L + ++YQ Sbjct: 583 GQEAEILLQNADVALYRSKEQGRGTCQLYNPTMN-AKEQFILENSLRHALDRDEFILHYQ 641 Query: 121 PIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINKLFSP---- 176 P N G I G + + ++ + + + I + L + + Sbjct: 642 PKVNICTGEIVGLEALVRWEHPEMGLVSP-ATFIPIAEETGLIVELGEWVLRTACQQAVL 700 Query: 177 IKNNLPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQ 236 + IN++ ++ I+ G +L L+ + + + + Sbjct: 701 WHKLGLAPLSVAINLSARQFYQPNLVEIVAQVIESTGLNPQQLELEITETIAVKNMEFAK 760 Query: 237 SSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTII 296 S L ++ V+++++DFG GY+ L++L+ +PF+ + + ++ D++ S I +I Sbjct: 761 SILCNLQALGVHIAMDDFGTGYSSLNYLKQLPFNTLKIDQSFIQDLKPASKDVEIINAVI 820 Query: 297 DLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLLASLKQ 352 L K L + V+A+G++ ++Q + + ++G S PL D+ L A+ Q Sbjct: 821 ALGKGLDLKVVAEGVDNEEQLELLRSLNCEIVQGYLFSRPLSVDSTTDILQANWLQ 876 >UniRef50_Q31GH8 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=3 Tax=cellular organisms RepID=Q31GH8_THICR Length = 1466 Score = 496 bits (1278), Expect = e-139, Method: Composition-based stats. Identities = 58/356 (16%), Positives = 128/356 (35%), Gaps = 14/356 (3%) Query: 2 NTIKIKLNLIDYDSIVNIEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIKT-VSCQK 60 + + L D + ++L + ++ SI V Q Sbjct: 1118 GGDEFIVVLPDTG-------ENGAVHVAEKILESISDQLNLKPYKLFITPSIGIAVYPQD 1170 Query: 61 MKLYKKLNVKSDLTLWRDVFLRFKAYLQP-KNIICDNFNSSVLPVVSSKGESMAHYNIYY 119 K L +D +++ Y + + + + +YY Sbjct: 1171 GKDADSLLKNADTAMYQAKNDGRNVYRFFTMEMQAHSSRIMQIESALRVALFDQQFELYY 1230 Query: 120 QPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINKLFSPIKN 179 QP AK+G+I G + I + + + + I ++ + + + Sbjct: 1231 QPQTCAKSGSIIGVEALIRWNHPEMGPVSPQ-EFIPVAEQSGQILAIGWWVLRTAIRQIK 1289 Query: 180 NLPHG----FFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRY 235 + +N++ D+ ++ + ++ G L L+ + + Sbjct: 1290 IWSEHGKPCIKVAVNLSAVQFRYEDLPKQVMKILEEEGVSPEFLELELTESVAMANPEAV 1349 Query: 236 QSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTI 295 + ++ + + +S++DFG GY+ LS+L+ S + + ++ D+ +S I I Sbjct: 1350 IEMMDKLVGHGIKMSIDDFGTGYSSLSYLKRFKVSKLKIDQSFIRDLAVDSDDRSIIEAI 1409 Query: 296 IDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLLASLK 351 I LSK L + IA+G+ET+ Q ++ E+ ++G S L +AF + Sbjct: 1410 ISLSKALGLKTIAEGVETQAQLDFLQEKQCDEIQGFYYSKALTPEAFDAFYEKQSQ 1465 >UniRef50_C7CCD7 Putative diguanylate cyclase (GGDEF) /phosphodiesterase (EAL), with GAF and two PAS/PAC sensor domains n=1 Tax=Methylobacterium extorquens DM4 RepID=C7CCD7_METED Length = 1028 Score = 495 bits (1277), Expect = e-139, Method: Composition-based stats. Identities = 64/351 (18%), Positives = 136/351 (38%), Gaps = 5/351 (1%) Query: 2 NTIKIKLNLIDYDSIV-NIEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIKTVS-CQ 59 + ++L ++ IV +++ S + ++ + + + SI Sbjct: 656 GDVVVRLGGDEFAIIVSHLDHARQASVLAQRVIDAVGQPLDLGGHLVTVGISIGIAFAPT 715 Query: 60 KMKLYKKLNVKSDLTLWRDVFLRFKAYLQPKNIICDNFN-SSVLPVVSSKGESMAHYNIY 118 + L +DL L+R Y + + L + + + ++ Sbjct: 716 NGDTSETLFKNADLALYRAKASARNTYCFYEAGMDAAVEARMQLEFEMREAITCGSFALH 775 Query: 119 YQPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINKLFSPIK 178 YQP+ + I G + + + A D + I + L + Sbjct: 776 YQPVLRLADHRIVGFEALMRWPHPKRGMIAPD-EFIPSAEETGLIVPLGSWALQEACREA 834 Query: 179 NNLPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSS 238 + P I +N++ +E+ + + G RLVL+ + + + Sbjct: 835 ASWPDHLRIAVNVSAVQFQQPGLEQGVMSALAASGLAPHRLVLEVTESVLVQDAEAVIAC 894 Query: 239 LRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDL 298 L R+++ V ++L+DFG GY+ LS+L+ PF + + ++ +I + I ++ + Sbjct: 895 LHRLKSLGVRIALDDFGTGYSSLSYLRRFPFDRIKIDRSFISEIG-DPGAAAIVRAVVGI 953 Query: 299 SKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLLAS 349 + QL V A+G+ET Q + G ++G +S PLPAD + + +S Sbjct: 954 AMQLGATVTAEGVETTAQLEQVRSEGCMEVQGYLVSRPLPADRAIEFISSS 1004 >UniRef50_A1WHK3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Verminephrobacter eiseniae EF01-2 RepID=A1WHK3_VEREI Length = 859 Score = 495 bits (1277), Expect = e-139, Method: Composition-based stats. Identities = 63/349 (18%), Positives = 138/349 (39%), Gaps = 10/349 (2%) Query: 2 NTIKIKLNLIDYDSIVNIEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIKTVSCQKM 61 + + L + + +LL+ L + ++++ SI + Sbjct: 499 GGDEFVVMLEALAPDLR-TATAQAEMVADKLLASLNQPFALDGGQHYSTLSIGVTLFGEQ 557 Query: 62 K-LYKKLNVKSDLTLWRDVFLRFKAYLQPKNIICDNFN-SSVLPVVSSKGESMAHYNIYY 119 + +L ++DL L++ + N S L +G + A +YY Sbjct: 558 RLSVDELLKRADLALYQAKAAGRNTQRFFDPDMQAAVNARSNLEADLRQGLARAELLVYY 617 Query: 120 QPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINKLFSPIKN 179 QP+ + + G + + ++ +D I + L ++ + Sbjct: 618 QPVVD-HQARLMGAEALVRWRHPQRGMIGP-ADFIPLAEQTGLILPLGQYVLQTACAQLQ 675 Query: 180 NLPH-----GFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRR 234 G I++N++ + LH +K G + RL L+ + L I Sbjct: 676 RWSQHPDTAGLSISVNVSARQFRQPGFVAQVLHQLKSHGADPRRLKLELTESLLLGDIED 735 Query: 235 YQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATT 294 + + ++++ V +L+DFG GY+ LS+L+ +P + + ++ ++ ++ I T Sbjct: 736 TIARMAQLKSEGVGFALDDFGTGYSSLSYLKRLPLDQIKIDQSFVREVLADPNDAAIVRT 795 Query: 295 IIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFV 343 I+ L+K L + V+A+G+ET Q ++ G + +G P+P + F Sbjct: 796 ILALAKSLDLQVVAEGVETTGQLSFLQLHGCEGFQGYLFGRPVPMEVFA 844 >UniRef50_C5JAR6 Conserved uncharacterized protein n=1 Tax=uncultured bacterium RepID=C5JAR6_9BACT Length = 922 Score = 495 bits (1277), Expect = e-139, Method: Composition-based stats. Identities = 49/351 (13%), Positives = 120/351 (34%), Gaps = 12/351 (3%) Query: 1 MNTIKIKLNLIDYDSIVNIEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIKT-VSCQ 59 + + L L D + ++L+ + + V SI + Sbjct: 569 LGGDEFVLLLPDLTDT------SSAEVVAEKILAACNQPFDVGGHEAYIAGSIGIAIFPD 622 Query: 60 KMKLYKKLNVKSDLTLWRDVFLRFKAYLQPK-NIICDNFNSSVLPVVSSKGESMAHYNIY 118 + L +D ++R + + + ++ Sbjct: 623 DERDPILLMRNADAAMYRSKREGKGVFRYFTPEMNARALEHMRMESQLRHAIERNEMKVH 682 Query: 119 YQPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINKLFSPIK 178 YQP+ ++ G + G + + N + + I + + + + Sbjct: 683 YQPLVDSGTGRLVGAEALLRWSNPVLGEVSPE-QFIPLAEETGLILSIGAWVLRTACRDA 741 Query: 179 NNLPHG---FFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRY 235 + F+ +NI+ + + + G L L+ + L + Sbjct: 742 ASWQRPDHEIFVAVNISGKQFQKRTLVEIVRSSLNESGLPPACLELELTESVLLEHTQET 801 Query: 236 QSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTI 295 S ++ + + V +++DFG G++ +S+L+ PF + + ++ D+ N + +I Sbjct: 802 LSIIQELESLGVGFAIDDFGTGFSSISYLRRFPFDTLKIDRSFIKDLGDNEGDADLVKSI 861 Query: 296 IDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKL 346 I ++ + + V+ +G+ET Q ++ G +G S P+P F + Sbjct: 862 IAMANSMSLKVVGEGVETHGQREFLRLSGCHIAQGWLYSRPIPGKDFQELI 912 >UniRef50_B7KTV8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Methylobacterium extorquens group RepID=B7KTV8_METC4 Length = 772 Score = 495 bits (1276), Expect = e-139, Method: Composition-based stats. Identities = 64/345 (18%), Positives = 141/345 (40%), Gaps = 4/345 (1%) Query: 2 NTIKIKLNLIDYDSI-VNIEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIKTVS-CQ 59 I + ++ + V P + ++ L+ L ++ S SI Sbjct: 414 GDIVARFGGDEFVVLNVAFTSPSEVEDLARRLIESLSTPVPLDNESVTIGVSIGIAFAPT 473 Query: 60 KMKLYKKLNVKSDLTLWRDVFLRFKAYLQPKNIICDNFN-SSVLPVVSSKGESMAHYNIY 118 + ++L +D L+R + + + L + + Sbjct: 474 DGRTAEELLKNADAALYRAKTAGRGTFRFFEPEMDRKLQARQRLVQDLRNALTRDELRLD 533 Query: 119 YQPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINKLFSPIK 178 YQP ++ G I+GC+ + ++ + + + I + + + + Sbjct: 534 YQPFVKSETGVISGCEALLRWRHPERGMISP-VEFIPLAEESGLIVPIGMWVIQQACREA 592 Query: 179 NNLPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSS 238 + P + I++N++P + D+ + L + G RL ++ + + Sbjct: 593 ASWPSTYRISVNVSPVQFRSRDLPQVILAALTSSGLAPARLEVEVTEAVLIDDADTALEI 652 Query: 239 LRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDL 298 LR+IR+ V ++L+DFG GY+ LS+L+ PF + + ++ ++++ + +I I D+ Sbjct: 653 LRQIRSLGVRVALDDFGTGYSSLSYLRRFPFDKIKIDRSFVQELDTRHDSQVIVQAIRDM 712 Query: 299 SKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFV 343 ++ L + V A+G+ET QA + + G + L+G S P PA+ Sbjct: 713 AQGLGMTVTAEGVETDDQAKRLRQTGCEELQGFLYSRPRPANELT 757 >UniRef50_C6NZZ7 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=2 Tax=Bacteria RepID=C6NZZ7_9PROT Length = 1152 Score = 495 bits (1276), Expect = e-139, Method: Composition-based stats. Identities = 64/361 (17%), Positives = 136/361 (37%), Gaps = 12/361 (3%) Query: 1 MNTIKIKLNLIDYDSIVNIEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIK-TVSCQ 59 + + + L + +E I ++L L + Y + R + SI T+ Sbjct: 790 LGGDEFVVMLEELSEQT-LEAAAQTESIGEKILLTLNQPYLLAAHEYRNSPSIGATLFGN 848 Query: 60 KMKLYKKLNVKSDLTLWRDVFLRFKAYLQPKNIICDNF-NSSVLPVVSSKGESMAHYNIY 118 K + ++L ++D+ +++ + + ++L SK + +Y Sbjct: 849 KPQSIEELLKQADIAMYQAKKAGRNTLRFFDPQMQETVIARALLERELSKALENDQFQLY 908 Query: 119 YQPIY-NAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINKLFSPI 177 YQ + G + I + + + I + + + Sbjct: 909 YQIQMTDL--NEPFGAEALIRWIHPERGLI-PPNHFIPLAEEVGLILPIGLWVLDTACNQ 965 Query: 178 KNNL-----PHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYII 232 + +N++ D + ++ RL L+ + L I Sbjct: 966 IKIWEKNASTRELVLAVNVSARSFFQDDFVTQIQTVLQRHAINPKRLKLEITESMMLNSI 1025 Query: 233 RRYQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIA 292 + + ++ V +++DFG GY+ L +L+ +P + + ++ DI ++S I Sbjct: 1026 EQTIEKMNALKKLGVQFAMDDFGTGYSSLQYLKRLPLDQLKIDQSFVRDIATDSSDKAIV 1085 Query: 293 TTIIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLLASLKQ 352 TTI+ ++ L++DVIA+G+ET++Q +IE G +G P P F L L+Q Sbjct: 1086 TTIVAMAHSLNLDVIAEGVETEQQRQLLIESGCSQYQGYLFGKPAPIRQFEESLKPGLRQ 1145 Query: 353 V 353 Sbjct: 1146 A 1146 >UniRef50_C7QU83 Sensor protein n=3 Tax=cellular organisms RepID=C7QU83_CYAP0 Length = 1514 Score = 494 bits (1274), Expect = e-138, Method: Composition-based stats. Identities = 59/354 (16%), Positives = 133/354 (37%), Gaps = 13/354 (3%) Query: 1 MNTIKIKLNLIDYDSIVNIEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIK-TVSCQ 59 ++ + L D + I + S + +L++ + + + S+ ++ Sbjct: 1161 ISGDEFVAVLEDIEDIQH------ASMVVAKLMTVFEEPFPLEGQIIHMTSSMGLSLFPD 1214 Query: 60 KMKLYKKLNVKSDLTLWRDVFLRFKAY-LQPKNIICDNFNSSVLPVVSSKGESMAHYNIY 118 L +D ++R Y + + F + + + Sbjct: 1215 DGMDTAILLRNADSAMYRAKEEGRNTYCFYAEEMTSAAFEYVLFENALRGALKRNEFYLV 1274 Query: 119 YQPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHIN-KLFSPI 177 YQP + + G +V + + + + + I + + + + Sbjct: 1275 YQPQIDLSSHRWVGMEVLLRWHHPELGIVSP-AQFIPIAEQSGLIQEIGTWVLYRACCQA 1333 Query: 178 KNNLPHGF---FITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRR 234 K L G I +N+ I + + G L L+ + ++ Sbjct: 1334 KTWLDQGIDFGHIAVNVAAPQIQQNNFVHLVQDALDSSGLPSPHLELELTEGLVMHQTED 1393 Query: 235 YQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATT 294 L +++ +YL+++DFG GY+ LS+L+ +P + + + K+ DI ++ I+ Sbjct: 1394 RIKQLEVLQDMGIYLAIDDFGTGYSSLSYLKRLPINKLKIDKSFVRDIPHDTNDMAISEA 1453 Query: 295 IIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLLA 348 +I L K L++ +IA+G+E + QA ++ E+G +G S PLP + + Sbjct: 1454 VIALGKALNLRIIAEGVEQEIQATFLREKGCHEAQGYLYSKPLPPEEITQLFAE 1507 >UniRef50_Q1NQ51 PAS:GGDEF:EAL n=1 Tax=delta proteobacterium MLMS-1 RepID=Q1NQ51_9DELT Length = 751 Score = 494 bits (1274), Expect = e-138, Method: Composition-based stats. Identities = 60/354 (16%), Positives = 133/354 (37%), Gaps = 10/354 (2%) Query: 1 MNTIKIKLNLIDYDSIVN-IEFPCLLSEIEIELLSQLLKGYSVNE-ISKRRNRSIKT-VS 57 ++ + ++ I + P +E ELL+ L + + ++ SI V Sbjct: 398 VDDTLARPGGDEFVLIQEALADPQEATETARELLASLDQPFQLDGGQEIYLGASIGITVF 457 Query: 58 CQKMKLYKKLNVKSDLTLWRDVFLRFKAY-LQPKNIICDNFNSSVLPVVSSKGESMAHYN 116 L ++ ++ + + + D + + + Sbjct: 458 PGDGTTPPDLLKNAEAAMYHAKENGRNRFSFYAEQMNADALARLQMEMALRQAVENRELL 517 Query: 117 IYYQPIYNAKNG-NIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHI----N 171 +YYQP + + ++ G + I +N +G A D I + + + Sbjct: 518 LYYQPQWQLADSPSVIGAEALIRWRNKEGELIAPD-QFIPLAEKSGLIGAIGDWVIDEAC 576 Query: 172 KLFSPIKNNLPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYI 231 + ++ + +N++ ++ ++ L+ + + Sbjct: 577 RQLRIWRDQGKKQLRVAVNVSARQFRAGNLAEVVAQALRKHEIPAHCFELELTESILMEK 636 Query: 232 IRRYQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDII 291 L R V ++L+DFG GY+ L++L P + + + ++ D+ S +I Sbjct: 637 PEEAAELLNRCAALGVGIALDDFGTGYSSLAYLSRFPITVLKIDRSFVRDLNHRSEAALI 696 Query: 292 ATTIIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRK 345 A +II L+ ++ + V+A+G+ET++Q Y+ RG +G S PLPA+ F Sbjct: 697 ADSIIALAHRMGLQVVAEGVETEEQRAYLQSRGCDLAQGFLFSPPLPAEQFAEF 750 >UniRef50_C9P6X4 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Vibrio metschnikovii CIP 69.14 RepID=C9P6X4_VIBME Length = 919 Score = 494 bits (1273), Expect = e-138, Method: Composition-based stats. Identities = 65/350 (18%), Positives = 138/350 (39%), Gaps = 12/350 (3%) Query: 1 MNTIKIKLNLIDYDSIVNIEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIKTVSCQK 60 + + + L DS ++I + ++L L K Y ++ I SI Sbjct: 559 IGGDEFVIILEQLDSDLDIAS-KRADLLCRKILDTLSKPYYIDNIEHFSTLSIGVTLFL- 616 Query: 61 MKL--YKKLNVKSDLTLWRDVFLRFKAYLQP-KNIICDNFNSSVLPVVSSKGESMAHYNI 117 + +L +DL +++ + + + + + + + Sbjct: 617 GETKGIDELLKHADLAMYQAKGAGRNTHRFFNPEMQAKVLEHAAMANDIRHALTRNEFTL 676 Query: 118 YYQPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINKLFSPI 177 YYQP +G + G + I ++ + + I + L + + Sbjct: 677 YYQPQV-THDGQLTGAEALIRWQHPKQGTISP-IEFIPIAEETGLILPLGEWVLDQACQV 734 Query: 178 KNNLP-----HGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYII 232 + INI+ + ++ L ++ + RL L+ + + Sbjct: 735 LAVWQNSPLTDSLVLAINISAKQFHQTGFVQQVLEALQRYRANPDRLKLELTESMLHEDL 794 Query: 233 RRYQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIA 292 + + +++ V SL+DFG GY+ L++L+ +P + + K+ D+ +NS IA Sbjct: 795 EDTITKMSQLKKYGVSFSLDDFGTGYSSLNYLKRLPLDQLKIDKSFVRDLLTNSHDADIA 854 Query: 293 TTIIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAF 342 TI+ L+K +++ VIA+G+ET++Q + G +G S P+P +AF Sbjct: 855 RTIVSLAKSMNLAVIAEGVETQEQRLALASYGCLDFQGYLFSRPVPLEAF 904 >UniRef50_C4L753 Diguanylate cyclase/phosphodiesterase with PAS/PAC and MHYT sensor(S) n=1 Tax=Exiguobacterium sp. AT1b RepID=C4L753_EXISA Length = 819 Score = 494 bits (1273), Expect = e-138, Method: Composition-based stats. Identities = 63/351 (17%), Positives = 134/351 (38%), Gaps = 8/351 (2%) Query: 7 KLNLIDYDSIVNIEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIKT-VSCQKMKLYK 65 +L ++ + L + EL++ L + + SI + + Sbjct: 467 RLGGDEFIILSPDTKSNLAAHRAQELINVLHPPFELENEEVFTGASIGISLHPSDGDTAE 526 Query: 66 KLNVKSDLTLWRDVFLRFKAYLQPKNIICDNF-NSSVLPVVSSKGESMAHYNIYYQPIYN 124 +L +D+ ++R Y N + ++ S L + KG + ++YQP Sbjct: 527 ELIKNADIAMYRAKADGKNGYQFFTNELNESVSRRSNLSMALRKGIGRGEFTVHYQPQIQ 586 Query: 125 AKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHI----NKLFSPIKNN 180 + + G + + + + + + I + L + + ++ Sbjct: 587 LETEMVIGMEALVRWNHPELGMISP-GEFIPIAEETGSIHRLGEFVLNEACRQNKAWQDA 645 Query: 181 LPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSLR 240 F + +NI+ D+ + G E L L+ + R ++ Sbjct: 646 SIPPFRVAVNISAVQFAQKDLPEVVSRALAASGLEAQYLELELTESVI-QSADRAIETMH 704 Query: 241 RIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSK 300 + V+LS++DFG GY+ LS+L+ P + + + +IES+ + TII ++ Sbjct: 705 ELVALGVHLSIDDFGTGYSSLSYLKLFPIDTLKIDQHFTKNIESDEKDAALVKTIIRMAH 764 Query: 301 QLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLLASLK 351 +L ++VIA+G+ET+ Q ++ +G + PLPA+ K Sbjct: 765 ELDLNVIAEGVETENQVAFLKAESCNQAQGYFYNRPLPAEEIEVFFQQYKK 815 >UniRef50_A1W7N9 Diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(S) n=4 Tax=Comamonadaceae RepID=A1W7N9_ACISJ Length = 1047 Score = 494 bits (1273), Expect = e-138, Method: Composition-based stats. Identities = 64/355 (18%), Positives = 135/355 (38%), Gaps = 11/355 (3%) Query: 2 NTIKIKLNLIDYDSIVNIEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIKTVSCQKM 61 + + L D + E E+ +L+ + + ++ S+ + + Sbjct: 694 GGDEFVVVLKDLGADPQ-EAANRAEEMGQTILAAIRAPFDIDGQQHHTALSVGIAIFRGV 752 Query: 62 -KLYKKLNVKSDLTLWRDVFLRFKAYLQPKNIICDNF-NSSVLPVVSSKGESMAHYNIYY 119 + +L +SDL ++ + + L G ++Y Sbjct: 753 RESADELLKRSDLAMYEAKAAGRDTLRFFDPQMQAAVSERAALEADLRAGLDAGQLELFY 812 Query: 120 QPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINKLFSPIKN 179 QP + G I G + + ++ D + ++ I + + + + Sbjct: 813 QPKVD--QGRITGAEALVRWRHPDRGFISP-AEFIPLAEESGLILRVGEWVMRSACAQLA 869 Query: 180 NLPHG-----FFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRR 234 + +N++P + L + G + RL L+ + L + Sbjct: 870 QWSAHPVLGELTVAVNVSPRQFHEGSFVPQVLEALAASGADARRLRLELTEGMLLQDVED 929 Query: 235 YQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATT 294 + + ++R V SL+DFG GY+ L++L+ +P + + K+ D+ ++ +IA T Sbjct: 930 TIAKMVQLRGYGVGFSLDDFGTGYSSLAYLKRLPLHELKIDKSFVRDVLTDPNDAVIART 989 Query: 295 IIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLLAS 349 I+ L L + V+A+G+ET+ Q ++ G +G LS PL A AF +L Sbjct: 990 IVALGTSLGLRVVAEGVETEAQRAFLERNGCHAWQGYLLSPPLQAAAFEALVLKR 1044 >UniRef50_Q47FQ3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Proteobacteria RepID=Q47FQ3_DECAR Length = 1093 Score = 494 bits (1273), Expect = e-138, Method: Composition-based stats. Identities = 55/346 (15%), Positives = 135/346 (39%), Gaps = 8/346 (2%) Query: 2 NTIKIKLNLIDYDSIVNIEFPCLLS-EIEIELLSQLLKGYSVNEISKRRNRSIKT-VSCQ 59 N +L ++ I+ ++ L+ ++ ++L L ++ SI Sbjct: 739 NDTIARLGGDEFMIILPLKANEALAGKLASKILDALRPPIRIDGHELFVTPSIGICFYPN 798 Query: 60 KMKLYKKLNVKSDLTLWRDVFLRFKAYLQPKN-IICDNFNSSVLPVVSSKGESMAHYNIY 118 L +D +++ Y + N + + + ++ Sbjct: 799 DGVTVNALMRNADTAMYQAKANGRNTYCYFTAEMNAAADNYFQIESDLRRAVDRNEFEVF 858 Query: 119 YQPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINKLFS-PI 177 YQP+ + K I + + ++ + I + + + + + Sbjct: 859 YQPVIDLKTHRITSYEALVRWRHPTKGLVGP-AQFITVAEESGLIGEIGTIVLRQACSQL 917 Query: 178 KNNLPHGFF---ITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRR 234 ++ + GF + +N++P ++ ++ + R+ L+ + + Sbjct: 918 RSWIDEGFTSPILALNLSPIQFNDPNLTEGICRILRDYDLTPDRIELEITETVIMQDGEL 977 Query: 235 YQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATT 294 +L+ + + LS++DFG GY+ L++L+ P + + ++ D+ +N I T Sbjct: 978 ALGTLQNLSSRGFRLSIDDFGTGYSSLAYLKRFPVDTLKIDRSFITDMTANENDRAIVTA 1037 Query: 295 IIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPAD 340 I+ L+ LH+ VIA+G+ETK+Q + + +G ++ P+PA+ Sbjct: 1038 IMALANSLHLSVIAEGVETKEQYDLLSALNCNFAQGYYMAKPMPAE 1083 >UniRef50_C7RK65 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RK65_9PROT Length = 1327 Score = 494 bits (1273), Expect = e-138, Method: Composition-based stats. Identities = 56/355 (15%), Positives = 129/355 (36%), Gaps = 13/355 (3%) Query: 1 MNTIKIKLNLIDYDSIVNIEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIKT-VSCQ 59 + + + + D P +S I ++L+ L E SI V Q Sbjct: 980 LGGDEFLIVIEDVG------EPTAVSHIAEKILNVLQASPVTVEHEFFVGASIGISVFPQ 1033 Query: 60 KMKLYKKLNVKSDLTLWRDVFLRFKAYLQP-KNIICDNFNSSVLPVVSSKGESMAHYNIY 118 + L +D+ ++R Y K++ + + + +Y Sbjct: 1034 DGADAETLMKNADVAMYRAKERGRNTYEFFTKDLTQTSLARLQMETDLRRAIERGELRVY 1093 Query: 119 YQPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHIN-KLFSPI 177 QP ++ G + G + + + I + + + Sbjct: 1094 LQPQFSLATGKVVGAEALVRWLRPQQGLVLP-GEFIKLAEESGLIVPIGEWVQGTAACQW 1152 Query: 178 KNN---LPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRR 234 +++N++ + I++ +++ G L L+ + + Sbjct: 1153 ATWVAAGLAPGVLSVNVSGVEFARGRIQQTARRTLELSGLPARFLELEITESAIMSHAEN 1212 Query: 235 YQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATT 294 L +R + L ++DFG GY+ L++L+ +P + + + ++ + +++ IA Sbjct: 1213 SVQVLDNLRAMGISLVIDDFGTGYSSLAYLKRLPLNKLKVDQSFVRGLPNDTEDCAIARA 1272 Query: 295 IIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLLAS 349 +I L L + VIA+G+ET+ Q ++ G ++G P+P D + + L+ Sbjct: 1273 VIALGHSLQLTVIAEGVETEAQREFLTGEGCDEMQGYLRGRPMPFDDYHARFLSG 1327 >UniRef50_C5V1H2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V1H2_9PROT Length = 1134 Score = 494 bits (1273), Expect = e-138, Method: Composition-based stats. Identities = 58/360 (16%), Positives = 134/360 (37%), Gaps = 10/360 (2%) Query: 1 MNTIKIKLNLIDYDSIVNIEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIKT-VSCQ 59 + + + + + D+ E ++ I ++ S L Y + E + SI + Sbjct: 778 LGGDEFVILVEEIDTRAE-ETSKHIAAIAEKIRSALSVPYRLKEKHHHSSPSIGVCLYRG 836 Query: 60 KMKLYKKLNVKSDLTLWRDVFLRFKAYLQPKNIICDNFN-SSVLPVVSSKGESMAHYNIY 118 + L +D+ +++ A ++ L +Y Sbjct: 837 IEESTDDLLKHADMAMYQAKDSGRNAVRFFDPLMQQAVEARVTLENDLRHALPNDQLQLY 896 Query: 119 YQPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINKLFSPIK 178 YQ + + G + + + + + I + + + + K Sbjct: 897 YQIQVD-NDRRAIGAEALVRWIHPIRGMVSP-AHFIPIAEETSLILEVGAWVLKTACLQL 954 Query: 179 NNLPH-----GFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIR 233 + +N++ + I+ + RL L+ + L + Sbjct: 955 AVWADRPMTCNLILAVNVSVQQFKQVGFVEHIAELIRAYCIVPQRLKLELTESVVLNDVS 1014 Query: 234 RYQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIAT 293 + +++ V LS++DFG GY+ LS+L+N+P + + ++ +I ++ ++ Sbjct: 1015 DIVQKMCALKSLGVRLSMDDFGTGYSSLSYLKNLPLDQLKIDQSFVRNIATDENDAVMVK 1074 Query: 294 TIIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLLASLKQV 353 TII +++ ++VIA+G+ET+ Q ++ + G +G P P + F +L A K V Sbjct: 1075 TIIAMAQNFRLNVIAEGVETEAQLAFLKQNGCMCYQGYYFGKPAPIEQFQSQLEALSKTV 1134 >UniRef50_Q8DL70 Tll0627 protein n=2 Tax=Chroococcales RepID=Q8DL70_THEEB Length = 845 Score = 494 bits (1273), Expect = e-138, Method: Composition-based stats. Identities = 58/354 (16%), Positives = 124/354 (35%), Gaps = 15/354 (4%) Query: 1 MNTIKIKLNLIDYDSIVNIEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIKTVSC-Q 59 + + + L D + P ++ +L L + + + SI + Sbjct: 474 LGGDEFAILLED------LSDPAQAMKVAERILMVLGRPFLLEGHEIFTTASIGIAFPWE 527 Query: 60 KMKLYKKLNVKSDLTLWRDVFLRFKAYL-QPKNIICDNFNSSVLPVVSSKGESMAHYNIY 118 + + L +D ++R L Y + + + + +Y Sbjct: 528 DSQTAEDLLRDADTAMYRAKSLGKARYEVFSMTMRAQTIALMQMETELRRAAEREEFLVY 587 Query: 119 YQPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINKLFSPIK 178 YQPI + + G + + ++ + + + + + + + Sbjct: 588 YQPIVDLATLKMVGFETLLRWQHPERGIISP-GEFMAVAEETGLILPISWWVMAEACRQM 646 Query: 179 NNL------PHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYII 232 I +N++ D+ + G RL L+ + + Sbjct: 647 QRWAVIFPRSRKLRIGVNLSGRHFQQADLLPNLRSILAETGFPAQRLCLEVTEGILIDNK 706 Query: 233 RRYQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIA 292 ++L IR + +S++DFG GY+ LS+L P + + +T + S + I Sbjct: 707 EVAIATLEEIRAMGIGVSMDDFGTGYSSLSYLHRFPIDTLKIDRTFISALNSEESSATIV 766 Query: 293 TTIIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKL 346 I+ L+ L + V+A+GIET++Q + G Y +G + PL A + L Sbjct: 767 HAILMLAHSLRLQVVAEGIETREQYRALQALGCNYGQGYFFARPLSARQVEKLL 820 >UniRef50_Q2SF23 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SF23_HAHCH Length = 637 Score = 494 bits (1273), Expect = e-138, Method: Composition-based stats. Identities = 65/355 (18%), Positives = 134/355 (37%), Gaps = 13/355 (3%) Query: 1 MNTIKIKLNLIDYDSIVNIEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIK-TVSCQ 59 + + + L D ++ + ++L L + + + + SI T++ Sbjct: 284 LGGDEFTVLLTDIVDTF------SVTPVATQILKALKEPIKLKKHEVIVSTSIGVTLAPT 337 Query: 60 KMKLYKKLNVKSDLTLWRDVFLRFKAY-LQPKNIICDNFNSSVLPVVSSKGESMAHYNIY 118 L +DL L+R Y + + ++ + + Sbjct: 338 DGANADVLMKNADLALYRAKEHGRDRYHFYTEELNAHALKQLLMEQELRHALQFEEFTLG 397 Query: 119 YQPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINKLFSPIK 178 +QP N G I + I + DS I+ ++ + + K Sbjct: 398 FQPQVNLTTGKIVSVEALIRWHHPSKGLVMPDS-FISVAEETGLINPIGRWVLKNACMQM 456 Query: 179 NNLPH----GFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRR 234 L I +N++ +E+ + G E L L+ + + I+ Sbjct: 457 KMLQDLTGSAIKIAVNLSARQFDDPKLEQSIEEALNETGLEPEWLELEVTESMLMGDIQA 516 Query: 235 YQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATT 294 + L+R+R V L+++DFG GY+ LS+L+ +P + + + + DI +S I + Sbjct: 517 VTNKLKRLRQTGVSLAIDDFGSGYSSLSYLKKLPVNALKVDREFVRDIPEDSNDMEITSA 576 Query: 295 IIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLLAS 349 II ++ +L + V+A+G+ET +Q Y++ + +G S PL + L Sbjct: 577 IIAVAHKLQLKVVAEGVETAEQKEYLLANQCDFAQGYFFSKPLSFEDLYIYLNEH 631 >UniRef50_C6P3H6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P3H6_9PROT Length = 837 Score = 493 bits (1271), Expect = e-138, Method: Composition-based stats. Identities = 56/353 (15%), Positives = 130/353 (36%), Gaps = 10/353 (2%) Query: 1 MNTIKIKLNLIDYDSIVNIEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIKT-VSCQ 59 + + + + + + N E ++ I ++ + L + Y + + + SI + Sbjct: 481 IGGDEFVVLIEEIGT-DNEEVSTKVALIAEKIRAALTEPYLLKDKEHHSSPSIGVCLYLG 539 Query: 60 KMKLYKKLNVKSDLTLWRDVFLRFKAYLQPKNIICDNFN-SSVLPVVSSKGESMAHYNIY 118 + L +DL +++ + + L + +Y Sbjct: 540 NEESVDTLLRHADLAMYQAKESGRNGVRFFDPAMQLAVETRAALEADMRHAVTGKQLRLY 599 Query: 119 YQPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINKLFSPIK 178 YQ + G + I + + + I + + + + + Sbjct: 600 YQIQL-TSDHRPLGAEALIRWMHPVRGLVSP-AQFIPIAEESSLILEIGHWVLETACKQL 657 Query: 179 NNLPHG-----FFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIR 233 + IN++ + D + + RL L+ + L + Sbjct: 658 VLWSKHERTRNLILAINVSAQQFNKHDFVDTVSTLLHLHQLNPNRLKLELTESVVLSDVA 717 Query: 234 RYQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIAT 293 S + ++ V L+L+DFG GY+ LS+L+ +P + + ++ D+ ++ ++ Sbjct: 718 DVVSKMHALKALGVKLALDDFGTGYSSLSYLKQLPLDQIKIDRSFVSDVTTDPSDAVMVQ 777 Query: 294 TIIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKL 346 TII+L+ ++VIA+G+ET+ Q ++ + G +G P+P D F L Sbjct: 778 TIINLAHNFRMNVIAEGVETEDQLNFLKQNGCMAYQGFLFGKPMPIDEFEALL 830 >UniRef50_B8DLW6 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=5 Tax=Desulfovibrio RepID=B8DLW6_DESVM Length = 739 Score = 493 bits (1271), Expect = e-138, Method: Composition-based stats. Identities = 57/354 (16%), Positives = 134/354 (37%), Gaps = 12/354 (3%) Query: 3 TIKIKLNLIDYDSIVNIEFPCLLSEIEI----ELLSQLLKGYSVNEISKRRNRSIKT-VS 57 + +L ++ ++ + E+ + + ++ + SI V+ Sbjct: 368 DMVARLGGDEFVVLLPLSAEGD-GELAETESARIQDSFTRPFNAADHELYVMPSIGISVA 426 Query: 58 CQKMKLYKKLNVKSDLTLWRDVFLRF-KAYLQPKNIICDNFNSSVLPVVSSKGESMAHYN 116 + + L +++ ++R + + + D + KG + Sbjct: 427 PEDGRDPATLLKNAEIAMYRAKEQGGARFRRFTQAMNDDVTRRLAIEKSIRKGLENDEFV 486 Query: 117 IYYQPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINKLFSP 176 ++YQP + G + G + + D + I + V L + + Sbjct: 487 VFYQPRVDIVTGQVTGMEALVRWARPD-GTLVPPLEFIPVAEDTGLVVALGERVLRDACI 545 Query: 177 IKNNLPH---GFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIR 233 I +NI+ D+ + G +L L+ + + + Sbjct: 546 QTRRWTDELGPLRIAVNISARQF-QPDLLDRVQAALAESGLPPSQLELEITETTMMRDLP 604 Query: 234 RYQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIAT 293 + L R+ + ++++DFG G++ L +L+N P + + ++ D+ + I + Sbjct: 605 TSVAILERLAAQGISIAIDDFGTGHSSLYYLKNFPIDTIKIDRSFVRDVPGDEGDATIVS 664 Query: 294 TIIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLL 347 TI+ + + L ++V+A+G+ET Q G++ G + ++G S PLPAD F + Sbjct: 665 TIVTMGRNLSLNVVAEGVETDDQLGFLRAHGCREVQGYYYSKPLPADGFADWMR 718 >UniRef50_B9JLU1 Sensory box/GGDEF family protein n=1 Tax=Agrobacterium radiobacter K84 RepID=B9JLU1_AGRRK Length = 766 Score = 493 bits (1270), Expect = e-138, Method: Composition-based stats. Identities = 62/352 (17%), Positives = 134/352 (38%), Gaps = 14/352 (3%) Query: 1 MNTIKIKLNLIDYDSIVNIEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIKTV-SCQ 59 + + + L D ++ + + + +N+I R SI Sbjct: 408 IGGDEFVIILEQMDLESCLDRLSA-------IREAVTRPIVLNDIELRVTCSIGVASYPS 460 Query: 60 KMKLYKKLNVKSDLTLWRDVFLRFKA-YLQPKNIICDNFNSSVLPVVSSKGESMAHYNIY 118 +L +D+ ++R L L + + + ++ Sbjct: 461 HGSTAGELLASADMAMYRAKELGRDGIALFTSAMTAIVRKKLSRTDELRQALLRDEFVLH 520 Query: 119 YQPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHI----NKLF 174 YQP + + G I + I +S D I + + + + + Sbjct: 521 YQPQVDVRTGRIVAAEALIRWNHSSEGLVYP-GDFIALAEETSLIVPIGEWVLKTACRQA 579 Query: 175 SPIKNNLPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRR 234 ++ I++N++ + + G + I L L+ + + + Sbjct: 580 KAWQDQGREPIRISVNVSARQFQEKRLIETVATALSESGLDPIWLELEITESLIMKDLAG 639 Query: 235 YQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATT 294 + ++ + V L+++DFG GY+ LS L+ P S + + ++ DI ++ I Sbjct: 640 SIARMQELETLGVKLAVDDFGTGYSSLSALKRFPLSRLKIDRSFIADIPHDADDMAITAA 699 Query: 295 IIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKL 346 II L+++L ++VIA+G+ET++QA +++E G ++G S P+ F R L Sbjct: 700 IISLAQKLGLEVIAEGVETEEQARFLVESGCNEIQGYLFSRPVEEAQFNRML 751 >UniRef50_B7KHV9 Diguanylate cyclase/phosphodiesterase with GAF sensor n=3 Tax=Cyanobacteria RepID=B7KHV9_CYAP7 Length = 1262 Score = 492 bits (1269), Expect = e-138, Method: Composition-based stats. Identities = 56/353 (15%), Positives = 131/353 (37%), Gaps = 12/353 (3%) Query: 3 TIKIKLNLIDYDSIVNIEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIKT-VSCQKM 61 + + L + + + +LL+ + + V + S+ ++ Sbjct: 498 GARFIILLSK------LSYSDESVMVCQKLLNDFQEPFYVQSQAIYLGASLGIALAPYDG 551 Query: 62 KLYKKLNVKSDLTLWRDVFLRFKAYLQPKNIICDNFNSSVLPVVSSKGESMAHYNIYYQP 121 + L ++ ++ Y + + N +L K + ++YQP Sbjct: 552 DTAEILLKNAESAMYEAKKQGKNTYQIYRPGSDHDKNKLILEADLRKAIERNEFVLHYQP 611 Query: 122 IYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINKLFSP----I 177 + + G + I ++ + + I + L + + Sbjct: 612 QIDLNTRKLIGVEALIRWQHPSLGMVSP-ALFIPLAEETGLICPLGEWVLRTACHQYRIW 670 Query: 178 KNNLPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQS 237 + + +N++ + DI +K G L L+ + + + + + Sbjct: 671 QKAGFPKIQMAVNLSAFQLQQDDIVARIAMILKETGMTPSDLELEITETTVMENLEQMTA 730 Query: 238 SLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIID 297 L +++ + ++++DFG GY+ L+ L+++P + + K+ DI +S + II Sbjct: 731 ILEQLKQMGIKIAIDDFGTGYSSLNVLKHLPVDTLKIDKSFVQDITLDSNDAKLCQGIIM 790 Query: 298 LSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLLASL 350 L K +DV+A+G+ET Q ++ +G +S PL DA + LL + Sbjct: 791 LGKAFELDVLAEGVETFTQLEFLRSLNCDRAQGYLISRPLAPDALIELLLKAQ 843 >UniRef50_B7KBH1 Diguanylate cyclase/phosphodiesterase n=9 Tax=Chroococcales RepID=B7KBH1_CYAP7 Length = 712 Score = 492 bits (1269), Expect = e-138, Method: Composition-based stats. Identities = 60/353 (16%), Positives = 122/353 (34%), Gaps = 13/353 (3%) Query: 2 NTIKIKLNLIDYDSIVNIEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIKT-VSCQK 60 + + L I ++ +L L + + + S+ + Q Sbjct: 354 GGDEFVVLLP------YISHTEDSIKLAQRILDVLKHPFEIQKQQFYIKTSMGISIYPQD 407 Query: 61 MKLYKKLNVKSDLTLWRDVFLRFK-AYLQPKNIICDNFNSSVLPVVSSKGESMAHYNIYY 119 + + L +D L+R + L + + ++YY Sbjct: 408 GEDGETLLKNADAALYRAKERGRNHFQFYSTTMTTKASLVLRLENLLHRALENQELSLYY 467 Query: 120 QPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINKLFSP--- 176 QP K G I G + + + + + I + + + K Sbjct: 468 QPQVKIKTGEITGIEALLRWTHPELGQVSPH-KLIPLAEQTDLIIPIGQWALKTACQQSL 526 Query: 177 -IKNNLPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRY 235 + I +N + ++ ++ G L L+ + + Sbjct: 527 DWQKLGIKPLPIAVNFSARQFQQPNLVTLINQVLEETGLAPNLLELEITETTIMQNEDFA 586 Query: 236 QSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTI 295 + +L +R V++SL+DFG GY+ LS+LQ P + + + + H ++ N I + I Sbjct: 587 RQALEELRQMGVHISLDDFGTGYSSLSYLQKFPLTTLKIDQCFTHSLKDNPQDLAIISAI 646 Query: 296 IDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLLA 348 I L L + VIA+G+ET +Q + + +G S PL ++ + L Sbjct: 647 ITLGNHLQLRVIAEGVETLQQLEILQRLHCQEAQGFWFSRPLNSEDITQLLKQ 699 >UniRef50_B9YY70 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Lutiella nitroferrum 2002 RepID=B9YY70_9NEIS Length = 1054 Score = 492 bits (1269), Expect = e-138, Method: Composition-based stats. Identities = 48/355 (13%), Positives = 127/355 (35%), Gaps = 12/355 (3%) Query: 2 NTIKIKLNLIDYDSIVNIEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIKT-VSCQK 60 + L + + + P +++ LL L + + ++ + + SI + Sbjct: 704 GGDEFVLIVPE------LASPAEAAQLAQRLLDDLRRPFQIDGQALAISTSIGISLFPDN 757 Query: 61 MKLYKKLNVKSDLTLWRDVFLRFKAYLQPK-NIICDNFNSSVLPVVSSKGESMAHYNIYY 119 ++L V +DL ++ Y + L + + Y Sbjct: 758 GSELQELLVSADLAMYHAKAQGRNRYQFFTPELNAQVAERLTLENHLRQALERQQLYLVY 817 Query: 120 QPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINKLFSPIKN 179 QP + N + GC+ + ++ + + + I + + + Sbjct: 818 QPQFAIDNRRLVGCEALLRWQHPEQGLISP-ARFIPLAEETGLIVEIGRWVLDEACRQAA 876 Query: 180 NLPH---GFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQ 236 + +N++ + D+ E + L L+ + + + Sbjct: 877 AWLAAGTPLRVAVNVSARQLGQPDLLAEVEAALARHRLPSCWLELEVTESTLMEDAEQAV 936 Query: 237 SSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTII 296 L+ + ++L+++DFG GY+ L++L+ + + + ++ N I + I+ Sbjct: 937 RHLQAFKERGIHLAVDDFGTGYSSLTYLKRFSPDLIKIDRAFVMNLPDNRDDAAIVSAIV 996 Query: 297 DLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLLASLK 351 L++ L + +A+G+E+++Q ++ + G ++G P A +L + Sbjct: 997 QLAEALGMQTLAEGVESEEQLDFLAQAGCDVVQGYLTGRPQSAGELTAQLAGANS 1051 >UniRef50_Q2BPG4 Sensory box/GGDEF family protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BPG4_9GAMM Length = 862 Score = 492 bits (1268), Expect = e-138, Method: Composition-based stats. Identities = 60/352 (17%), Positives = 141/352 (40%), Gaps = 9/352 (2%) Query: 2 NTIKIKLNLIDYDSIVN-IEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIK-TVSCQ 59 I +L ++ I +E I +LL++L++ Y ++ SI + + Sbjct: 511 EDIVARLGGDEFTVITGVLETRSDAESIAQKLLNELIRPYLIDGNELSVTASIGVSFFPE 570 Query: 60 KMKLYKKLNVKSDLTLWRDVFLRFKAY-LQPKNIICDNFNSSVLPVVSSKGESMAHYNIY 118 + L +D ++ Y L + + L + S +Y Sbjct: 571 DGDNSEILLRNADSAMYEAKRNGRNGYRLYTSAMTEEISERFALTEELREAISREELELY 630 Query: 119 YQPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINKLFSP-- 176 +QP + + G+I G + + + D I + ++ + + + Sbjct: 631 FQPQVDIRTGSILGAEALLRWNHPQRGMIPPD-RFIPIAESSGQMIKIGAWVLEQVCAKV 689 Query: 177 --IKNNLPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRR 234 K I +NI+ + + ++ + + + L L+ + + + Sbjct: 690 AGWKERGIVAPKIAVNISNQQ-MNRELVEQITELLASSKCDPACLELEITESCLMENPEQ 748 Query: 235 YQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATT 294 L ++ V ++++DFG GY+ LS+L+ +P + + + ++ D++ + I Sbjct: 749 MAHELSSLKALGVGIAIDDFGTGYSSLSYLKQLPINKLKVDRSFVSDLQDDENDLAITRA 808 Query: 295 IIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKL 346 I+ + + ++++VIA+GIET++Q +++ +G S PLP + F+ L Sbjct: 809 IVAMGQSMNLNVIAEGIETQEQIDLLLKLECFEGQGYFYSKPLPEEQFLAYL 860 >UniRef50_A1TZQ7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=5 Tax=Gammaproteobacteria RepID=A1TZQ7_MARAV Length = 819 Score = 492 bits (1268), Expect = e-138, Method: Composition-based stats. Identities = 56/357 (15%), Positives = 124/357 (34%), Gaps = 13/357 (3%) Query: 1 MNTIKIKLNLIDYDSIVNIEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIKTV-SCQ 59 + + + L + P S++ +L + ++ SI Sbjct: 466 LGGDEFLVVLPGLNG------PDASSQVAERILKTFAPPFMLSGQEVFVTTSIGIATFPD 519 Query: 60 KMKLYKKLNVKSDLTLWRDVFLRFKAYLQPK-NIICDNFNSSVLPVVSSKGESMAHYNIY 118 L +D ++ AY + + + + K + + +Y Sbjct: 520 DSDNSGTLLQHADAAMYEAKHKGKSAYARFTPEMSEVSHERLQMESHMRKALELGEFELY 579 Query: 119 YQPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINKLFSP-- 176 +QPI + +G + + + N D I + + + K Sbjct: 580 FQPIVDTASGGLVAAEALLRWNNPAMGMVMPD-RFIPLAEETGLIIPIGEWVVKEACQAA 638 Query: 177 --IKNNLPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRR 234 + I +N++P + + L L+ + + L Sbjct: 639 YCWQAMTGREISIAVNVSPRQFRDPGFTDAIMRALNDSNLRPELLELEITERLILDNSIE 698 Query: 235 YQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATT 294 L+++ + LS++DFG GY+ LS+L++ PF + + K+ D+ + + Sbjct: 699 TADILKQLDKVGIRLSVDDFGTGYSALSYLKSYPFDTLKIDKSFVQDVLKENEDASLVRA 758 Query: 295 IIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLLASLK 351 II+++ L + V+A+G+E + ++ Y +G S PLP F+ L + + Sbjct: 759 IINMAHSLGLKVVAEGVEEEDLTHFLKAEHCDYSQGYFYSRPLPEQDFIHWLETNER 815 >UniRef50_Q89VU0 Bll0955 protein n=2 Tax=cellular organisms RepID=Q89VU0_BRAJA Length = 955 Score = 492 bits (1268), Expect = e-138, Method: Composition-based stats. Identities = 57/344 (16%), Positives = 128/344 (37%), Gaps = 4/344 (1%) Query: 3 TIKIKLNLIDYDSIVNIEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIKT-VSCQKM 61 +L ++ + P ++ L+ + + S S+ ++ Sbjct: 602 DTVARLGGDEFAVLQRGPQPQSAEKLARRLVEIIGHPPPLESQSIHVGVSVGIAIAPDHG 661 Query: 62 KLYKKLNVKSDLTLWRDVFLRFKAYL-QPKNIICDNFNSSVLPVVSSKGESMAHYNIYYQ 120 +L +DL L++ AY + + + L +++ +Q Sbjct: 662 LDADELMKCADLALYQAKARGRGAYQLFEPEMEEEARSRHALEHNLRGALEAREFHLVFQ 721 Query: 121 PIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINKLFSPIKNN 180 P ++ + G + + K+ + ++ I + + + + + + Sbjct: 722 PQVRLESSELTGFEALLRWKHPSRGFVSP-AEFIPIAEENGLIVPIGEWVLRTACATAAS 780 Query: 181 LPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSLR 240 P + +N++P + + G RL L+ + L L Sbjct: 781 WP-DVTVAVNLSPVQFRARGLAAMVTSALAEAGLPPQRLELEVTETALLDDSEATIEILH 839 Query: 241 RIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSK 300 ++R V +SL+DFG+GY+ LS+L+ PF + + ++ + + + I TI L Sbjct: 840 QLRALGVRVSLDDFGVGYSSLSYLRKFPFDRIKIDRSFVGTLGESPESVAIVRTIASLGS 899 Query: 301 QLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVR 344 L ++ A+G+ET++Q ++ E G ++G P PA R Sbjct: 900 VLGVETTAEGVETEEQLDFVRECGCTAVQGYYFGRPCPAAEVAR 943 >UniRef50_Q2Y9Y0 Response regulator receiver (CheY-like) modulated diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) n=2 Tax=Betaproteobacteria RepID=Q2Y9Y0_NITMU Length = 756 Score = 492 bits (1268), Expect = e-138, Method: Composition-based stats. Identities = 59/378 (15%), Positives = 144/378 (38%), Gaps = 28/378 (7%) Query: 3 TIKIKLNLIDYD-SIVNIEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIKT-VSCQK 60 I ++ ++ +V+ + + ++ L + + + SI V Sbjct: 364 DIVARIGGDEFGCILVSADDLGNAGLVASKIREALRQPFDLQGHQVTVTASIGISVYPID 423 Query: 61 MKLYKKLNVKSDLTLWRDVFLRFKAYLQPK-NIICDNFNSSVLPVVSSKGESMAHYNIYY 119 L D +++ Y + K + ++Y Sbjct: 424 SIDADTLVKNGDTAMYQSKTAGRDTYRFFTPEMNIRAIEKLDQENALRKALDREEFVLHY 483 Query: 120 QPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHI----NKLFS 175 QP + NG + G + + K + + I ++ + + + + Sbjct: 484 QPKVDLSNGWVTGMEALLRWKRPEHGVVEP-LEFIPALEQTGLITRVGAWVIESVCRQIA 542 Query: 176 PIKNNLPHGFFITININPEDILTCDIEREC--------------------LHFIKVFGTE 215 ++ +++N++ + ++ ++ + Sbjct: 543 EWRHAGIGEIPVSVNVSGRQFSRSTLNQDVIRATQANGIQPALLEFELQTERALRENSID 602 Query: 216 RIRLVLQFSTKEELYIIRRYQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLH 275 L L+ + + ++ S L+R++ + +S++DFG GY+ L++++ P + + Sbjct: 603 SDLLELELTESSLMMHAKKTVSILQRLKALGIQISIDDFGTGYSSLAYVKRFPIDVLKID 662 Query: 276 KTMFHDIESNSLTDIIATTIIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSS 335 ++ +I +NS I T IID++ LH+ V+A+G+ET +Q ++ RG ++G LS Sbjct: 663 RSFIQEITTNSADAAITTAIIDMAHSLHVRVVAEGVETAEQFDFLKGRGCDEVQGFYLSP 722 Query: 336 PLPADAFVRKLLASLKQV 353 PLPA+ + LL+ +++ Sbjct: 723 PLPANEISQLLLSGNRRL 740 >UniRef50_C6MIL1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Nitrosomonas sp. AL212 RepID=C6MIL1_9PROT Length = 576 Score = 491 bits (1266), Expect = e-137, Method: Composition-based stats. Identities = 58/351 (16%), Positives = 124/351 (35%), Gaps = 13/351 (3%) Query: 2 NTIKIKLNLIDYDSIVNIEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIKT-VSCQK 60 + + L N+E + ++L+ L + ++ + SI + Sbjct: 230 GGDEFIVLLS------NLESAFDAEAVAQKILNALQLHFLIDGKELHISGSIGISLFPDD 283 Query: 61 MKLYKKLNVKSDLTLWRDVFLRFKAYLQPK-NIICDNFNSSVLPVVSSKGESMAHYNIYY 119 + L SD+ ++ K + + V ++Y Sbjct: 284 GEDIWTLLRNSDIAMYHAKKNGRNNCEFFKPEMNRQAKERHSMEVALRNALKRDELLLHY 343 Query: 120 QPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINKLFS---- 175 QPI N G G +V + ++ I + + + + Sbjct: 344 QPIVNVNGGKADGFEVLLRWQHPGDGLIYP-VKFIRLAEETGMIIPIGEWLMRQSCLQIK 402 Query: 176 PIKNNLPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRY 235 + + IN++ + + + G L L+ + E + + Sbjct: 403 AWQEQGYEVPRLAINLSAIQFRQKTLMENIVRILDETGVTGHYLTLEITESELIEDVEET 462 Query: 236 QSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTI 295 +LR++ + +S++DFG GY+ LS L+ + + + ++ DI + I I Sbjct: 463 IKTLRQLSELGIEISIDDFGTGYSNLSFLKRYQINTLKIDRSFVRDIPDDPDDTAIIDAI 522 Query: 296 IDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKL 346 + ++ L + VIA+G+E ++Q Y+ G +G S PLPA +K+ Sbjct: 523 LVMAHALGLQVIAEGVENEQQLAYLALHGCTRFQGFYFSKPLPAIEIEKKM 573 >UniRef50_A1ALY4 Diguanylate cyclase/phosphodiesterase n=1 Tax=Pelobacter propionicus DSM 2379 RepID=A1ALY4_PELPD Length = 1238 Score = 491 bits (1266), Expect = e-137, Method: Composition-based stats. Identities = 55/356 (15%), Positives = 124/356 (34%), Gaps = 14/356 (3%) Query: 1 MNTIKIKLNLIDYDSIVNIEFPCLLSEIEI-ELLSQLLKGYSVNEISKRRNRSIKT-VSC 58 + + + L +IE + EI LL + + Y + SI + Sbjct: 883 LGGDEFVIIL------ADIEDSHQIEEIMKHRLLPLMRQPYDAGGYELHCSCSIGISIFP 936 Query: 59 QKMKLYKKLNVKSDLTLWRDVFLRFKAY-LQPKNIICDNFNSSVLPVVSSKGESMAHYNI 117 + L +D ++R + Y + + + KG + Sbjct: 937 EDGLDKDTLLRNADTAMYRAKEVGRNNYHFYTEELNSRAMQRLSIETSLRKGIERNELLL 996 Query: 118 YYQPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHI----NKL 173 +YQP + G G + + ++ D + + I + + + + Sbjct: 997 HYQPKLDLHTGKPYGLEALLRWQHPDHGMISP-MEFIPIAEETGLIIPIGKQVIRNACRQ 1055 Query: 174 FSPIKNNLPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIR 233 S + +++N++ + + ++ G R+ L+ + + Sbjct: 1056 LSRWSSVGMSHICLSLNVSAVQFRDRRFVEDLVQLVREEGVSPHRIELELTETMLMEDAV 1115 Query: 234 RYQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIAT 293 R + +++ S++DFG GY+ L++L P + + ++ + I Sbjct: 1116 RTIRVMETLKDEGFLFSIDDFGTGYSSLNYLHRFPIDCLKIDRSFIRGMLERPADLAIIK 1175 Query: 294 TIIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLLAS 349 II L L + VIA+G+E + + + G ++G ++ PL + LLA Sbjct: 1176 AIIGLGHTLDMQVIAEGVEKEDEYRALRAAGCDGIQGYFVARPLTPEQVPEWLLAR 1231 >UniRef50_C5V4D4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Gallionella ferruginea ES-2 RepID=C5V4D4_9PROT Length = 925 Score = 491 bits (1266), Expect = e-137, Method: Composition-based stats. Identities = 63/357 (17%), Positives = 136/357 (38%), Gaps = 14/357 (3%) Query: 1 MNTIKIKLNLIDYDSIVNIEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIKT-VSCQ 59 M + L L + ++ I +++ +L + + R S+ + Q Sbjct: 577 MGGDEFVLLLNGVNG------ADDVASIAGKIIHELSQPMRIGNDELRITPSLGISMCPQ 630 Query: 60 KMKLYKKLNVKSDLTLWRDVFLRFKAY-LQPKNIICDNFNSSVLPVVSSKGESMAHYNIY 118 + L +D+ L++ Y + + + L + + +Y Sbjct: 631 DGRDADDLLKYADVALYQAKQQGRATYRFYTQALHDQSVERVQLERLLRHALERNEFELY 690 Query: 119 YQPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINKLFSPIK 178 YQP + +G I GC+ I + + + I + + + K Sbjct: 691 YQPQVDLCDGRIIGCEALIRWNHPGMGQVSP-ARFIPIAEQSGLIIDIGNWVMKQACHQA 749 Query: 179 NNLPH---GFFITININPEDI-LTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRR 234 ++ N++ + ++ + + G + R+ ++ + L + Sbjct: 750 KRWHDQGWDIKVSFNVSARQFMRSGELMQSLRDALAESGVDPTRMEVELTESLLL-DPQG 808 Query: 235 YQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATT 294 L IR + L+L+DFG GY+ LS+L+ P S + + ++ ++N+ + T Sbjct: 809 MGEILHEIRALGIQLALDDFGTGYSSLSYLRRFPISILKIDRSFVSAADNNADDAEMVKT 868 Query: 295 IIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLLASLK 351 II ++ L + +IA+GIET Q + +G + +G S P+PA F L ++ Sbjct: 869 IIGMAHNLRMSLIAEGIETNAQRDMLETQGCEVGQGYHYSCPVPATEFSLLLQQGIR 925 >UniRef50_Q21FF8 Diguanylate cyclase/phosphodiesterase n=1 Tax=Saccharophagus degradans 2-40 RepID=Q21FF8_SACD2 Length = 581 Score = 491 bits (1266), Expect = e-137, Method: Composition-based stats. Identities = 52/355 (14%), Positives = 134/355 (37%), Gaps = 8/355 (2%) Query: 2 NTIKIKLNLIDYDSIVN-IEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIKTV-SCQ 59 N +L ++ +++ ++ P +++I ++L+ + + ++ S+ Sbjct: 215 NDTVARLGSDEFILLLDKVDNPHHITKIADKILNAIGQPLNICGHEITCTASLGVSQFPI 274 Query: 60 KMKLYKKLNVKSDLTLWRDVFLRFKAY-LQPKNIICDNFNSSVLPVVSSKGESMAHYNIY 118 L +D + R Y + + ++ ++ + + ++ Sbjct: 275 HGDSIDLLLKHADEAMARAKSEGKNRYKIYTAQMSERTVDALLMENDLRRALEQDEFILF 334 Query: 119 YQPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINKLFSP-- 176 YQP + + G I G + I ++ + D I + + + Sbjct: 335 YQPQVHLRTGKIIGLEALIRWQHKTKGVISP-LDFIPLAEETGLIEEVGAWVLAHACERF 393 Query: 177 --IKNNLPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRR 234 + +N++ + + L L+ + + Sbjct: 394 HHWLKQGLSLGKVAVNLSARQFRQAHFAETVVEALNKSKLPPQYLELEITESLTMQDTDE 453 Query: 235 YQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATT 294 +L + + ++++DFG GY+ LS+L+ P + + + +T HD+ S IA + Sbjct: 454 VLQTLGYLNKLGLSIAIDDFGTGYSSLSYLKKFPVNKLKIDRTFIHDVGSELDDGAIAKS 513 Query: 295 IIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLLAS 349 IIDL+ + + V+A+G+E Q+ ++ ++G ++G PL + ++ L + Sbjct: 514 IIDLAHNMSMLVVAEGVERLGQSRWLYDQGCDQVQGYYFCKPLSENELLKLLYSE 568 >UniRef50_D1U882 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfovibrio aespoeensis Aspo-2 RepID=D1U882_9DELT Length = 958 Score = 491 bits (1266), Expect = e-137, Method: Composition-based stats. Identities = 59/353 (16%), Positives = 137/353 (38%), Gaps = 8/353 (2%) Query: 2 NTIKIKLNLIDY-DSIVNIEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIK-TVSCQ 59 + ++ +V++ + ++ L + + + SI T+ Sbjct: 597 EDTVARQGGDEFLVVVVDVHEEREVVDLAEGLQRVFEEPFVIKGQEVFITPSIGVTLYPD 656 Query: 60 KMKLYKKLNVKSDLTLWRDVFLRFKAYL-QPKNIICDNFNSSVLPVVSSKGESMAHYNIY 118 + L +D+ +++ +Y + + L + + +Y Sbjct: 657 DGQDPASLVKNADMAMYQSKAKGRNSYFLFTQQMSERIAQRLTLESDMRRALKEREFTVY 716 Query: 119 YQPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHI----NKLF 174 +QP + +G ++G + + D D I + L + K Sbjct: 717 FQPKVDLASGEVSGLEALVRWVKPD-GIIVSPEDFIPMAEETGLIVPLGEFVLDASCKAM 775 Query: 175 SPIKNNLPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRR 234 ++ + +N++P D+ + ++ G RL L+ + + ++ Sbjct: 776 QVLQGVGCSALTVAVNLSPIQFGQEDLVEMVVANLERNGLPASRLELEITESTLMTDVQS 835 Query: 235 YQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATT 294 + L R+ + +S++DFG GY+ L +L+N P S + + ++ DI + I T Sbjct: 836 SVAQLNRLVELGITISIDDFGTGYSSLYYLKNFPISTLKIDRSFIRDITIDDSDAKIVET 895 Query: 295 IIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLL 347 ++ +++ + I V+A+G+ETK+Q + G ++G S PLP + + LL Sbjct: 896 VVLMARTMGIGVVAEGVETKEQLDLLATFGCATVQGYYYSRPLPLEKIIEFLL 948 >UniRef50_C6P1Q1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P1Q1_9PROT Length = 1135 Score = 491 bits (1266), Expect = e-137, Method: Composition-based stats. Identities = 62/357 (17%), Positives = 142/357 (39%), Gaps = 10/357 (2%) Query: 1 MNTIKIKLNLIDYDSIVNIEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIKTVSCQ- 59 + + + L D S +IE + +++S L K Y + + SI Sbjct: 778 IGGDEFVVMLEDL-SAESIEAASQTEAVGWKIISTLNKPYHLEKFEVHSTPSIGATLFDS 836 Query: 60 KMKLYKKLNVKSDLTLWRDVFLRFKAYLQPKNIICDNFN-SSVLPVVSSKGESMAHYNIY 118 + ++ L ++D+ +++ + D N + L K +N++ Sbjct: 837 RPQIIDDLFKQADIAMYQAKKAGRNTMRFFDPQMQDTLNTRTALEADLRKSIERREFNLF 896 Query: 119 YQPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINKLFSPIK 178 YQ + + G + I + + ++ I + + + + + Sbjct: 897 YQIQVD-EMNRPVGAEALIRWIHPKRGMVSP-AEFIPLAEETDLILNIGLWVLQEACAQL 954 Query: 179 NNLP-----HGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIR 233 + +N++ + D + F++ + + +L L+ + I Sbjct: 955 KTWQNNPLTRNLVLAVNVSAKQFRQSDFATQVRVFVEKYAIDPSKLKLELTESMLQENIE 1014 Query: 234 RYQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIAT 293 + ++ V SL+DFG GY+ L +++ +P + + + ++ HD++ + I Sbjct: 1015 DTILIMNALKEIGVQFSLDDFGTGYSSLQYIKKLPLNQLKIDQSFVHDLDFDRDDKAIVR 1074 Query: 294 TIIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLLASL 350 II ++K L +DVIA+G+ET++Q ++ +G + +G S PLP F L ++ Sbjct: 1075 AIIAMAKSLQLDVIAEGVETQEQRQLLLNKGCTHFQGYLFSKPLPIREFDALLERAI 1131 >UniRef50_Q3SK01 Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC and GAF sensor(S) n=1 Tax=Thiobacillus denitrificans ATCC 25259 RepID=Q3SK01_THIDA Length = 1059 Score = 491 bits (1265), Expect = e-137, Method: Composition-based stats. Identities = 57/352 (16%), Positives = 138/352 (39%), Gaps = 10/352 (2%) Query: 1 MNTIKIKLNLIDYDSIVNIEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIKTVSCQK 60 + + + L + + L + + ++L+ + + + + SI Sbjct: 693 VGGDEFVIVLEGLSASPG-DAGSLATRVGEKILASFARPFQLADYVHHCTASIGITLFND 751 Query: 61 -MKLYKKLNVKSDLTLWRDVFLRFKAYLQPK-NIICDNFNSSVLPVVSSKGESMAHYNIY 118 +L ++DL +++ A + + L V + + + ++ Sbjct: 752 RPTTLDELRKRADLAMYQAKAHGRNALRFFDPAMQAVVAARAELEVDLREALRLGAFELH 811 Query: 119 YQPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINKLFSPIK 178 YQ +A+ G ++G + + ++ A + I + L + + Sbjct: 812 YQAQVDAR-GCVSGAEALLRWQHPQRGWIAP-ASFIPLAEETGLILPLGLWVLDVACAQL 869 Query: 179 NNL-----PHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIR 233 + +N++ D + L I+ G + RL L+ + L + Sbjct: 870 VAWSKMPHMARLSLAVNVSARQFRQADFAAQVLAAIERSGADPRRLKLELTESLMLDNLD 929 Query: 234 RYQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIAT 293 + ++ + + SL+DFG GY+ L++L+ +P + + ++ D+ ++ IA Sbjct: 930 DTILKMSALKAHGIGFSLDDFGTGYSSLAYLKRLPLDEIKIDQSFVRDVLIDANDASIAR 989 Query: 294 TIIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRK 345 +I+ L + L+++V+A+G+ET Q ++ E G + +G + P PA F Sbjct: 990 SILALGQSLNLEVVAEGVETDAQHAFLAEHGCQAYQGYLFNRPQPARQFEAW 1041 >UniRef50_B1M2C0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylobacterium radiotolerans JCM 2831 RepID=B1M2C0_METRJ Length = 703 Score = 491 bits (1265), Expect = e-137, Method: Composition-based stats. Identities = 59/350 (16%), Positives = 131/350 (37%), Gaps = 4/350 (1%) Query: 2 NTIKIKLNLIDYDSIV-NIEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIKTV-SCQ 59 + + +L ++ +V + + P + L++ + + + S+ + Sbjct: 340 DDMVARLGGDEFAVLVADADDPARAETLAARLIAAVQAPIPFGKRRLKVGLSVGIAQAPS 399 Query: 60 KMKLYKKLNVKSDLTLWRDVFLRFKAYL-QPKNIICDNFNSSVLPVVSSKGESMAHYNIY 118 + L ++DL L R + + L + +Y Sbjct: 400 HGFDSETLFRRADLALHRAKTEGRNTHRVFEPAMDEAEAARRDLERDLRQAIEGDELILY 459 Query: 119 YQPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINKLFSPIK 178 YQP + G + G + + ++ + I + L + + Sbjct: 460 YQPQVSTGTGRLLGFEALVRWEHPTRGLV-PPNAFIPLAEESGLILPLGEWVLRAACREA 518 Query: 179 NNLPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSS 238 H + +N++P D+ L + G RL L+ + + + R Sbjct: 519 ARWAHPLKVAVNLSPRQFQQADLPERVLAILTETGLAPTRLELEITETLIINDMARALGI 578 Query: 239 LRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDL 298 LRR++ V ++++DFG GY+ L+ LQ PF + + ++ +E + +I ++ L Sbjct: 579 LRRLKAFGVSIAMDDFGTGYSSLATLQAFPFDKIKIDRSFVGHVEVSPQAAVIVRAVLGL 638 Query: 299 SKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLLA 348 + L + V+A+G+ET Q ++ +G +S P P + F ++ A Sbjct: 639 GRSLGMSVVAEGVETDAQMRFLAAEACDEAQGYLISKPQPIERFAEQIDA 688 >UniRef50_A0LAF7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Magnetococcus sp. MC-1 RepID=A0LAF7_MAGSM Length = 951 Score = 491 bits (1265), Expect = e-137, Method: Composition-based stats. Identities = 61/352 (17%), Positives = 147/352 (41%), Gaps = 8/352 (2%) Query: 2 NTIKIKLNLIDYDSIV-NIEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIKTVSC-Q 59 + +L ++ I+ +E + + +++QL +S+ E SI Q Sbjct: 581 SDTVARLGGDEFAIILPGMERAEDAAHVAETIINQLQVPFSIEENELFVGASIGIAVHGQ 640 Query: 60 KMKLYKKLNVKSDLTLWRDVFLRFKAYLQPK-NIICDNFNSSVLPVVSSKGESMAHYNIY 118 Y L + +D +++ Y ++ N V+ + ++ Sbjct: 641 DGDDYDSLTMNADAAMFKAKESGKGTYKFFTPDMNIQNAKRLVMEAELRRAVDNQELMLH 700 Query: 119 YQPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHIN-KLFSPI 177 YQP +A++ I G + + + + I + L + + + + Sbjct: 701 YQPKVDAESRQIVGMEALVRWVHPTRGVI-PPGEFIPLAEETGLIVPLGELVLTRACAQV 759 Query: 178 KNNLPHGFF---ITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRR 234 K G + +N++P ++ + ++ G L L+ + ++ + Sbjct: 760 KQWWDMGLPQVQVAVNLSPRQFQEPNLIEKVSEILRKTGFPATGLELEITESIAMHDVDN 819 Query: 235 YQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATT 294 +++++++ V +S++DFG GY+ LS+L+ P + + ++ D+ + I ++ Sbjct: 820 TIETVKKLKDLGVRISIDDFGTGYSSLSYLKKFPLHALKIDQSFVRDLGGDDDGASIISS 879 Query: 295 IIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKL 346 II ++K + + V+A+G+ET +Q ++ + + ++G LS PLP F+ L Sbjct: 880 IISMAKAMALGVVAEGVETAQQMEFLRGQECQQVQGFFLSKPLPPSDFLALL 931 >UniRef50_A2SDI4 Signal transduction protein n=2 Tax=Proteobacteria RepID=A2SDI4_METPP Length = 1006 Score = 491 bits (1265), Expect = e-137, Method: Composition-based stats. Identities = 53/359 (14%), Positives = 129/359 (35%), Gaps = 11/359 (3%) Query: 1 MNTIKIKLNLIDYDSIVNIEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIKT-VSCQ 59 + + + L D D + ++E+ ++L Q+ + + S+ + Sbjct: 651 LGGDEFVVLLSDLDDV----EVDGVAEVAKKILRQVAQPCVLGGTEVNVGASLGIALFPG 706 Query: 60 KMKLYKKLNVKSDLTLWRDVFLRFKAY-LQPKNIICDNFNSSVLPVVSSKGESMAHYNIY 118 + L ++D ++R Y K + L + + + ++ Sbjct: 707 DGEDPDTLMKRADAAMYRSKREGRNRYHFFSKAVDDAASARLQLEADMRRALAAGQFIVH 766 Query: 119 YQPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINKLFSPIK 178 YQP+ + + + + + + + + I + + + + Sbjct: 767 YQPVVHGRTRDAVAVEALLRWDRAGQGLQSP-AVFIPVAEESGLIVPMGHWVLRQACEQL 825 Query: 179 NNL----PHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRR 234 G + +N++P + D + G + RL + + + Sbjct: 826 RAWSGTALGGISVAVNVSPVQLAQADFVDTVADVLHATGVDGSRLEFEITESTLMQDPEA 885 Query: 235 YQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATT 294 LRR++ V ++++DFG GY+ L HL+ P + + T D+E+++ + Sbjct: 886 TLEMLRRLKGLGVRIAIDDFGTGYSSLGHLKRFPVDTLKIDHTFVRDLEADADDRELVRA 945 Query: 295 IIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLLASLKQV 353 I+ +++ L + V+A+G+ET+ QA + +G + P A L + Sbjct: 946 ILAMARSLRLHVVAEGVETEAQAAILAAMECPAFQGYLFARPAGAAVTAAWLQDRAATL 1004 >UniRef50_Q2SG37 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SG37_HAHCH Length = 841 Score = 491 bits (1265), Expect = e-137, Method: Composition-based stats. Identities = 65/356 (18%), Positives = 127/356 (35%), Gaps = 13/356 (3%) Query: 2 NTIKIKLNLIDYDSIVNIEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIKTV-SCQK 60 + L + N+E L+ + L+S + + S S+ + Sbjct: 357 GGDEFVLLVD------NLESEADLTHLAARLISSVSAPVLLLGQSHSITCSLGISSFPED 410 Query: 61 MKLYKKLNVKSDLTLWRDVFLRFKAYLQPKNIICDNF-NSSVLPVVSSKGESMAHYNIYY 119 + L +D+ ++R +Y + + D L + + ++Y Sbjct: 411 GDNVEVLMRHADIAMYRAKESGRNSYQFFTHQMQDRLNERLKLESSLKQALENDEFVLHY 470 Query: 120 QPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHI----NKLFS 175 QP + G I G + I ++ D I +S + + K Sbjct: 471 QPQVDLSTGKIIGLEALIRWQSPTLGLV-PPGDFIPAAEEGRLISAIGEWVIFAVCKRLQ 529 Query: 176 PIKNNLPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRY 235 + + INI+ + E + + E L L+ + + Sbjct: 530 SWRRQGLKIVPVAINISALQFMEQKTEELVKQALNEYMVEPKYLELELTESLSMLDPVTS 589 Query: 236 QSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTI 295 S ++R+++ V LS++DFG GY+ LS+L+ P + + + K+ + +N I I Sbjct: 590 ISLMQRLKDIGVSLSIDDFGTGYSNLSYLKRFPVNKLKIDKSFVSGLTNNPDDYSIVKAI 649 Query: 296 IDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLLASLK 351 I +S+ L + IA+G ET Q + ++G S PLP L + Sbjct: 650 IRMSQSLGLKTIAEGAETAGQIALLAAENCDAIQGFYFSRPLPEAEICAMLKERPR 705 >UniRef50_D1T5E1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Burkholderia sp. CCGE1002 RepID=D1T5E1_9BURK Length = 1055 Score = 491 bits (1265), Expect = e-137, Method: Composition-based stats. Identities = 55/355 (15%), Positives = 129/355 (36%), Gaps = 13/355 (3%) Query: 2 NTIKIKLNLIDYDSIVNIEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIK-TVSCQK 60 + + + + L + + + + ++ S+ ++ Q Sbjct: 701 GGDEFVIV------MTDTVDEQSLITWMERVRASIAEPVWLDGTELYVGCSMGASLFPQD 754 Query: 61 MKLYKKLNVKSDLTLWRDVFLRFKAYLQPK-NIICDNFNSSVLPVVSSKGESMAHYNIYY 119 + L K+D+ ++R + + + + L + + ++Y Sbjct: 755 GDDAETLMKKADVAMYRAKDMGRNTFQFYQPEMNASAGARLNLERRLRRALRDNEFLLHY 814 Query: 120 QPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINKLFSP--- 176 QP + +G I G + + + + S I + L + + Sbjct: 815 QPQVDIVSGQIVGIEALVRWHDPEAGLV-PPSSFIPLAEESGLIGPLSEWVLREACRQNK 873 Query: 177 -IKNNLPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRY 235 ++ +++N++ +I + + + G E L L+ + + Sbjct: 874 AWQDQGLPPARVSVNLSARVFQQRNIAKLVMQVLAETGLEPRYLELELTESTIMRNAEEA 933 Query: 236 QSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTI 295 L + + L+++DFG GY+ LS+L+ P + + ++ DI + + I + I Sbjct: 934 VLMLNELHALGIGLAIDDFGTGYSSLSYLKRFPVDRLKIDRSFVSDIGVSGDDETITSAI 993 Query: 296 IDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLLASL 350 I L+ L + VIA+G+ET Q ++ ER ++G + PL + L L Sbjct: 994 IALAHSLKLQVIAEGVETSAQLDFLKERACDEMQGFYFAKPLSTEGISELLHGGL 1048 >UniRef50_C1DCZ4 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1DCZ4_LARHH Length = 759 Score = 490 bits (1264), Expect = e-137, Method: Composition-based stats. Identities = 58/350 (16%), Positives = 124/350 (35%), Gaps = 13/350 (3%) Query: 2 NTIKIKLNLIDYDSIVNIEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIKT-VSCQK 60 + L L D + ++ LL +L + ++ SI ++ + Sbjct: 403 GGDEFTLLLEDTG------QRTAVIDMANRLLDELSQPITLENQELHITASIGIALAPEH 456 Query: 61 MKLYKKLNVKSDLTLWRDVFLRFKAYLQP-KNIICDNFNSSVLPVVSSKGESMAHYNIYY 119 K L +D L+R + + + L + Y Sbjct: 457 GKDAATLLRHADTALYRAKDAGKNTFAFFTHTLHGLSNQRLALENALRHALPRNQLTLAY 516 Query: 120 QPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINKLFSPIKN 179 QP + + G +V + + + + + I + + + + Sbjct: 517 QPQIDPHRQRLVGVEVLLRWHHPELGQVSP-ATFIPLAEETGLILPIGRWVLETACRQLA 575 Query: 180 NLP-HGF---FITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRY 235 GF + +N++ + + G RL L+ + + Sbjct: 576 AWDTAGFSVGHVAVNLSAHQFNDPGLTHHLKAVLSDSGLAARRLELEVTESTLINNPTAA 635 Query: 236 QSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTI 295 + + ++ V LS++DFG GY+ L+ L+ P + + +T I +++ I I Sbjct: 636 IALMTELKELGVRLSIDDFGTGYSSLAQLKRFPLDTLKIDRTFVSGIPADASDLAITEAI 695 Query: 296 IDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRK 345 I ++K+L + V+A+G+ET Q ++ G + ++G S PL A+A Sbjct: 696 IAMAKKLSLSVVAEGVETADQRDFLARCGSELIQGYFYSPPLAAEALHSF 745 >UniRef50_B1ZGT4 Diguanylate cyclase/phosphodiesterase n=6 Tax=Methylobacterium RepID=B1ZGT4_METPB Length = 574 Score = 490 bits (1264), Expect = e-137, Method: Composition-based stats. Identities = 63/356 (17%), Positives = 127/356 (35%), Gaps = 8/356 (2%) Query: 2 NTIKIKLNLIDYDSIVN-----IEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIKT- 55 + +L ++ I E P + L+ + + Y V+ S+ Sbjct: 212 GDVVARLGGDEFAIIQGGPSSGAEQPQAAEALARRLVDLVGRTYVVDGHMLNVGVSVGVA 271 Query: 56 VSCQKMKLYKKLNVKSDLTLWRDVFLRFKAYLQPK-NIICDNFNSSVLPVVSSKGESMAH 114 +S + L +DL L+R + + + L + + ++ Sbjct: 272 LSPADGRNADDLLKHADLALYRAKAEGRGTHRFFEPAMNAQMQARRSLEIDLRRALALKQ 331 Query: 115 YNIYYQPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINKLF 174 +++ +QP + G I G + + + + + + I + + + Sbjct: 332 FDLAFQPQIQLETGQIVGFEALLRWNHPERGPVSP-ALFIPLAEEIGLIVGIGEWALRTA 390 Query: 175 SPIKNNLPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRR 234 I +N++P + +H + G + RL L+ + L Sbjct: 391 CREAAGWTQPASIAVNLSPVQFRGGRLVETVMHVLAQTGLDPARLELEITEGALLENTDS 450 Query: 235 YQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATT 294 L +R V +S++DFG GY+ LS+LQ PF + + ++ +E N+ I Sbjct: 451 VLDVLNGLRALGVKISMDDFGTGYSSLSYLQKFPFDKIKIDQSFVRGMEGNAECGAIVRA 510 Query: 295 IIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLLASL 350 I L L + A+G+ET Q + G ++G P+PA L+ S Sbjct: 511 IARLGASLGMRTTAEGVETATQLDAIRAEGCTEVQGYLTGRPMPAAQAAALLIPSP 566 >UniRef50_Q3A0D5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A0D5_PELCD Length = 1141 Score = 490 bits (1263), Expect = e-137, Method: Composition-based stats. Identities = 58/347 (16%), Positives = 137/347 (39%), Gaps = 8/347 (2%) Query: 7 KLNLIDYDSIVNI-EFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIKTV-SCQKMKLY 64 + +++ +++ + I ++L L Y +N+ SI + + Sbjct: 769 RFGGDEFNVLLSGPSHEEEIELIAHKILKSLAWPYDINDHEVFMTCSIGIASYPKDGREA 828 Query: 65 KKLNVKSDLTLWRDVFLRFK-AYLQPKNIICDNFNSSVLPVVSSKGESMAHYNIYYQPIY 123 L +D L+R L ++ + + ++YQP Sbjct: 829 ITLVKNADTALYRAKDLGRNNFQFYSSSMNARALERMAMESSLRRMFERQELRVHYQPQV 888 Query: 124 NAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINK----LFSPIKN 179 ++G I G + + ++ G+ A + + + + + + Sbjct: 889 GLQSGRITGLEGLVRWEHPVGNMIAPSV-FVPLAEETGLIVPMGEWVLQAGCYQLKTWLD 947 Query: 180 NLPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSL 239 + IN++ + D + +K L L+ + ++ + +L Sbjct: 948 AGFAPMRLGINVSAHQLQKSDFAELVMQVLKECDLPPHYLNLEITETVIMHNMNEAFETL 1007 Query: 240 RRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLS 299 RR+R + +S++DFG G++ LS+L+++P ++ + + ++ + IA II+++ Sbjct: 1008 RRLRAVGITISIDDFGTGFSSLSYLKDLPADHLKIDRAFVQNLPFGNNEANIARHIIEMA 1067 Query: 300 KQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKL 346 L++ VIA+G+E + Q ++ E G ++G +S PL A+ L Sbjct: 1068 HGLNLKVIAEGVENQAQLDFLREAGCDEIQGFLVSRPLAAEDITEIL 1114 >UniRef50_B3PKJ2 EAL domain protein n=1 Tax=Cellvibrio japonicus Ueda107 RepID=B3PKJ2_CELJU Length = 798 Score = 490 bits (1263), Expect = e-137, Method: Composition-based stats. Identities = 56/354 (15%), Positives = 140/354 (39%), Gaps = 8/354 (2%) Query: 7 KLNLIDYDSIV-NIEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIKT-VSCQKMKLY 64 +L ++ + + L+++ I+L QL Y+V+ IS SI V + Sbjct: 436 RLGGDEFVVLFPRVRTEGNLADLTIKLREQLQLPYTVDGISLHITPSIGIAVYPDDGEDP 495 Query: 65 KKLNVKSDLTLWRDVFLRFKAYLQPKN-IICDNFNSSVLPVVSSKGESMAHYNIYYQPIY 123 L +D ++ Y + + L + ++YQP Sbjct: 496 NTLIKNADAAMYLAKEKGRNNYQFYTPTLNAKTLDRLKLESDLRSAIDAGDFELHYQPQI 555 Query: 124 NAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHIN----KLFSPIKN 179 +G + G + I ++ + + ++ I + L + K + + Sbjct: 556 IGSSGQLWGLEALIRWRHRERGLISP-AEFIPLAEETGLIVGLGDWVLVQAVKQLAEWRR 614 Query: 180 NLPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSL 239 + +++NI+ D H ++ + L+ + + ++ +L Sbjct: 615 QGHNHLVVSVNISALQFRQGDFLDRVKHILQEAQLVPDAIELELTETMLMQDVQSAIQTL 674 Query: 240 RRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLS 299 + +R ++++DFG G++ L++L+++P + + + ++ ++ + I +II L+ Sbjct: 675 KGLRELGFRIAIDDFGTGFSSLNYLRHLPINVLKIDQSFVREMLQEPESLAIVESIIALA 734 Query: 300 KQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLLASLKQV 353 + L + IA+G+ET+ + + RG + ++G + P+P F + + Sbjct: 735 QALGKETIAEGVETRAEFDVLQARGCRLMQGYFFARPMPPVIFDQWYQQQTQST 788 >UniRef50_Q31GA6 Diguanylate cyclase/phosphodiesterase n=1 Tax=Thiomicrospira crunogena XCL-2 RepID=Q31GA6_THICR Length = 815 Score = 490 bits (1262), Expect = e-137, Method: Composition-based stats. Identities = 65/351 (18%), Positives = 135/351 (38%), Gaps = 10/351 (2%) Query: 1 MNTIKIKLNLIDYDSIVNIEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIKT-VSCQ 59 + + L L D + + ++L L K Y ++ SI + Sbjct: 464 IGGDEFVLILPSLDDDWK-DAATHAELVAQKVLRVLNKPYLLDSTPYHSTPSIGVKLFSG 522 Query: 60 KMKLYKKLNVKSDLTLWRDVFLRFKAYLQPKNIICDNFN-SSVLPVVSSKGESMAHYNIY 118 + ++L +DL +++ + + N SV+ + + + ++ Sbjct: 523 HQETLEELLKHADLAMYQAKAKGRNTVRFYDTTMQEVVNAKSVMEASMRQAITGQQFVLF 582 Query: 119 YQPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINKLFSPIK 178 YQP N NG I G + + ++ A + I + + + + + Sbjct: 583 YQPQIN-SNGQIIGAEALVRWRHPQKGLIAP-NKFIPLAEENGFILSIGRWVLQTACEQL 640 Query: 179 NNL-----PHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIR 233 + +N++ D+ E I G L L+ + + I Sbjct: 641 VEWARQPATAQITMAVNVSARQFHQIDLVEEVERIICQTGANPQLLKLELTESLLVKDIE 700 Query: 234 RYQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIAT 293 ++ ++ V SL+DFG GY+ L++L+ +P + + +T DI +S IA Sbjct: 701 DVVDKMQALKKLGVSFSLDDFGTGYSSLAYLKRLPLDQLKIDQTFVRDIIDDSNDAAIAR 760 Query: 294 TIIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVR 344 +I L+K + +VIA+G+E +Q +I+ G + +G P+P + F + Sbjct: 761 AVIALAKSMEFNVIAEGVENIEQHQMLIDMGCRVFQGYLFGRPVPIEEFFQ 811 >UniRef50_C5V5K2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V5K2_9PROT Length = 925 Score = 490 bits (1262), Expect = e-137, Method: Composition-based stats. Identities = 56/355 (15%), Positives = 135/355 (38%), Gaps = 10/355 (2%) Query: 1 MNTIKIKLNLIDYDSIVNIEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIKT-VSCQ 59 + + + L D + I ++E I ++L+ L Y + + SI + Sbjct: 566 IGGDEFVVMLEDLN-IESVEAAAQTEVIGEKILAALRMPYQLLTNEFHSSVSIGISLFSN 624 Query: 60 KMKLYKKLNVKSDLTLWRDVFLRFKAYLQPKNIICDNFN-SSVLPVVSSKGESMAHYNIY 118 + + ++D+ +++ + D + + L K + ++ Sbjct: 625 NGQSQDEPLKQADIAMYQAKKSGRNKLRFFDQRMQDTISSRANLEAELRKALANEQLQLH 684 Query: 119 YQPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINKLFSPIK 178 YQ ++ + I G +V + + + + + + + + + Sbjct: 685 YQIQVDSAHQTI-GAEVLLRWIHPVNGIISP-AQFVPVAEETGLILPIGLWVLETACAQL 742 Query: 179 NNLPHG-----FFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIR 233 + IN++ E I+ L L+ + L + Sbjct: 743 KKWQDNPATAQLILAINVSARQFHQNGFATEVRSVIERHDINPALLKLELTEGMLLNNLD 802 Query: 234 RYQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIAT 293 +++R ++ V SL+DFG GY+ L +L+ +P + + + ++ D+ + I Sbjct: 803 DTIATMRSLQEFGVQFSLDDFGTGYSSLQYLKRLPLAQLKIDQSFVRDLATGYNDQAIVR 862 Query: 294 TIIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLLA 348 TII ++ L+++VIA+G+ET+ Q +++ + +G P+P + F L + Sbjct: 863 TIIAMAHSLNLNVIAEGVETEIQRQILLKNQCSHFQGYLFGKPMPIEQFESLLSS 917 >UniRef50_Q47EK9 PAS:GGDEF n=1 Tax=Dechloromonas aromatica RCB RepID=Q47EK9_DECAR Length = 963 Score = 489 bits (1261), Expect = e-137, Method: Composition-based stats. Identities = 53/352 (15%), Positives = 131/352 (37%), Gaps = 8/352 (2%) Query: 7 KLNLIDYDSIV-NIEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIKTV-SCQKMKLY 64 +L + ++ ++ S + ++ ++ V + V Q Sbjct: 343 RLGTDVFGILLPDVADTHQASIVARRIIDTMIMPVRVAGQDVFATAGVGIVFYPQDGNDV 402 Query: 65 KKLNVKSDLTLWRDVFLRFKAYLQ-PKNIICDNFNSSVLPVVSSKGESMAHYNIYYQPIY 123 +L + + L +Y + + L + + +YYQP Sbjct: 403 HELVTNAGIAGRHAKNLGRNSYQYYFPGMHEGARDRMFLEIDLRHATLRNEFVLYYQPKA 462 Query: 124 NAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHI----NKLFSPIKN 179 + +G I G + + ++ + + D I + + + + + Sbjct: 463 SCADGRITGVEALLRWQHPERGIVSPD-QFIPLLEETGLIVQVGRWVLEEACRQAVEWQA 521 Query: 180 NLPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSL 239 + +++N++ + + + ++ G L L+ + + +L Sbjct: 522 AGLNIPSVSVNLSARQLQAETLLTDVAATLEKTGLNAACLDLEITESMLMDNADMAIQTL 581 Query: 240 RRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLS 299 ++ V +SL+DFG GY+ L++L+ P + + ++ DI ++S I +I ++ Sbjct: 582 SALKKMGVTISLDDFGTGYSSLAYLKRFPLDAIKVDRSFVQDIAADSDDASITRAVITMA 641 Query: 300 KQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLLASLK 351 L + V+A+G+ET +Q +I ++G S P+PA L++ + Sbjct: 642 HHLKLKVVAEGVETPEQLALLISHQCDVIQGYFFSRPMPASGMTELLVSDRR 693 >UniRef50_B9M1S6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Geobacter RepID=B9M1S6_GEOSF Length = 749 Score = 489 bits (1261), Expect = e-137, Method: Composition-based stats. Identities = 58/349 (16%), Positives = 135/349 (38%), Gaps = 12/349 (3%) Query: 7 KLNLIDYDSIVNIEFPCL-LSEIEIELLSQLLKGYSVNEISKRRNRSIKTV-SCQKMKLY 64 ++ ++ + +E P L +S + L+ + Y ++ + SI Sbjct: 378 RIGGDEFVVLFTLEGPQLNVSPLAQHLIDSITSVYPISGRDVYASTSIGIATFPDDGGDC 437 Query: 65 KKLNVKSDLTLWRDVF---LRFKAYLQPKNIICDNFNSSVLPVVSSKGESMAHYNIYYQP 121 L +D+ ++ + Y N+ + + + +QP Sbjct: 438 NSLLRCADMAMYAAKEGGGKGYHFYSPEMNL--KAHARMEMETNLRHALEREEFFLEFQP 495 Query: 122 IYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINKLFSP----I 177 I NA++G + G + + + + D I + L + + Sbjct: 496 IVNARDGRLVGAEALLRWSDPEKGLIMPDM-FIQVAEESGFIVPLGEWVLRTACRKMKDW 554 Query: 178 KNNLPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQS 237 + F I++N++ + I+ G + L L+ + + + Sbjct: 555 REAGLPPFRISVNVSGRQFCQANFTDTVCSIIRETGMDPSFLALEMTETSLMVDVEATAK 614 Query: 238 SLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIID 297 +L +++ ++ + ++DFG GY+ L +LQ P + + ++ D+ S++ I II Sbjct: 615 ALMQLKELDISIVIDDFGAGYSSLGYLQKFPIDRIKIDRSFIRDLSSHANDKAIVEAIIA 674 Query: 298 LSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKL 346 ++ +L + V+A+G+ET +Q ++ E+G ++G PL + F L Sbjct: 675 MAARLKLQVVAEGVETSEQLDFLKEQGCHEIQGFYFHRPLSEELFKTLL 723 >UniRef50_Q2W154 Putative uncharacterized protein n=2 Tax=Magnetospirillum RepID=Q2W154_MAGSA Length = 802 Score = 489 bits (1261), Expect = e-137, Method: Composition-based stats. Identities = 56/357 (15%), Positives = 142/357 (39%), Gaps = 13/357 (3%) Query: 1 MNTIKIKLNLIDYDSIVNIEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIKT-VSCQ 59 + + + L + + L+E+ ++ + L + ++ SI + Sbjct: 451 LGGDEFVVVL------THFQSTTELAEVAEKISAALDEPVELSGHKVHVGASIGIAIYPD 504 Query: 60 KMKLYKKLNVKSDLTLWRDVFLRFKAY-LQPKNIICDNFNSSVLPVVSSKGESMAHYNIY 118 + L +D ++R + N+ + + L + + ++ Sbjct: 505 DGDNFNALMKDADTAMYRAKQKGRNTFCFYDSNMNDEALDRLKLEEALRRALVRGEFQLF 564 Query: 119 YQPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHI----NKLF 174 YQP + + G +G + I + + + + I N +S + + + Sbjct: 565 YQPQVDLQTGRTSGVEALIRWNSPERGQVSP-ALFIPVAEESNLISMIGWWVLEESCRQI 623 Query: 175 SPIKNNLPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRR 234 + + G + +N++ L + + + +L ++ + + R Sbjct: 624 AAWREAGLTGIKVAVNVSGRQFLNHALVECISDLMAQYAVLPSQLEIELTESTVMAEPDR 683 Query: 235 YQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATT 294 L R+R + +S++DFG GY+ LS+L+ +P S + + ++ D+ + S I + Sbjct: 684 AIEQLTRLREIGIQVSVDDFGTGYSSLSYLKRLPLSTIKVDRSFVRDVNNQSDNAAIVSA 743 Query: 295 IIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLLASLK 351 I+ L+ L + ++A+G+ET+ + ++ + G ++G + P+PAD +L + Sbjct: 744 ILGLADALDMSIVAEGVETEGEEQHLKDAGCIKVQGFRYAKPMPADQLAAWMLRQGR 800 >UniRef50_B7S1Z2 Cyclic diguanylate phosphodiesterase domain protein n=1 Tax=marine gamma proteobacterium HTCC2148 RepID=B7S1Z2_9GAMM Length = 570 Score = 489 bits (1261), Expect = e-137, Method: Composition-based stats. Identities = 64/359 (17%), Positives = 139/359 (38%), Gaps = 14/359 (3%) Query: 1 MNTIKIKLNLIDYDSIVNIEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIKT-VSCQ 59 + + + L D I + + +L+ L + ++ + S+ + Q Sbjct: 216 LGGDEFTVVLSD------IPNAGQVERVAQRILAALSEPIALQSHNPVVTPSVGIALFPQ 269 Query: 60 KMKLYKKLNVKSDLTLWRDVFLRFKAY-LQPKNIICDNFNSSVLPVVSSKGESMAHYNIY 118 + L +D ++ + + + + + Sbjct: 270 DGEDPDTLVRNADTAMYAAKAQGRACFRFYDEEMNAKAVEQLKMEEELRDAMQNNELELR 329 Query: 119 YQPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINKLFSP-- 176 YQP + G++ + + K+S + D I ++ L + K + Sbjct: 330 YQPQVDTATGDVVSMEALVRWKHSTRGMVSP-LDFIPVAERTGQIIELGEWVMKEVARHC 388 Query: 177 --IKNNLPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRR 234 + F + +NI+P D+ R F++ G + RL L+ + + + Sbjct: 389 NYWDSMGLPPFRVCVNISPLQFNQSDLPRSIGEFLRESGMQASRLELELTESAIMTDAQT 448 Query: 235 YQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATT 294 L++++ + L+++DFG GY+ LS+L+ P + + ++ D+ + + I Sbjct: 449 NIEKLQQLKALGLELAVDDFGTGYSSLSYLKRFPIDTLKIDQSFVADLGT-TDGAAIVDA 507 Query: 295 IIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLLASLKQV 353 II LSK L++ VIA+GIE K+Q Y++ RG L+G + P+ + L + + Sbjct: 508 IIALSKTLNLRVIAEGIEEKEQLDYLVARGADLLQGYFFARPIYPEDVPDMLRQNFSEA 566 >UniRef50_Q47AR1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q47AR1_DECAR Length = 655 Score = 489 bits (1261), Expect = e-137, Method: Composition-based stats. Identities = 49/345 (14%), Positives = 130/345 (37%), Gaps = 8/345 (2%) Query: 6 IKLNLIDYDSIVN-IEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIKT-VSCQKMKL 63 +L ++ +V+ + + E+ +L + +++ SI + + + Sbjct: 299 FRLGGDEFVVVVDQLINEEAVIELVQQLAGGIGDPCNIDGHVLHCTSSIGISLYPEDGRD 358 Query: 64 YKKLNVKSDLTLWRDVFLRFKAYLQPKN-IICDNFNSSVLPVVSSKGESMAHYNIYYQPI 122 + L +D ++ + + L + +YYQP Sbjct: 359 AQALIRNADTAMYYAKANGRNNHKFFTEPMNAAANKRLHLESELWCALAENQLVLYYQPQ 418 Query: 123 YNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHI----NKLFSPIK 178 + +G + G + + ++ ++ I + L + + Sbjct: 419 IDLLSGKVVGVEALVRWRHPLRGLI-PPAEFIPVAEECGLILPLGHWVLLTACRQAREWL 477 Query: 179 NNLPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSS 238 + + +NI+ + + G RL L+ + ++ + + Sbjct: 478 DAGIDMGEMAVNISAHQFRQPEFISSVQAILAETGLPTGRLELEITESTIMHEVDAAIQT 537 Query: 239 LRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDL 298 L ++R + L+++DFG GY+ L++L+ P + + ++ D+E++ + T+I+ L Sbjct: 538 LAQLRAMGIKLAIDDFGTGYSSLAYLRRFPLDRLKIDRSFLADVETDPDAASLVTSIVLL 597 Query: 299 SKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFV 343 + L + ++A+G+E QA ++ + ++G P+ A+ V Sbjct: 598 GRSLGLQLVAEGVENFAQAEFLRTLECERVQGFHFYQPVCAEEVV 642 >UniRef50_C9Y8E7 Putative uncharacterized protein n=1 Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9Y8E7_9BURK Length = 633 Score = 489 bits (1261), Expect = e-137, Method: Composition-based stats. Identities = 59/355 (16%), Positives = 144/355 (40%), Gaps = 13/355 (3%) Query: 2 NTIKIKLNLIDYDSIVNIEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIKT-VSCQK 60 + + L ++ P ++++ ++L ++ + + I + SI + Q Sbjct: 277 GGDEFLIGL------TGLQHPDAVAKVSQDILQKMQAPFQLRGIEVLASCSIGIALYPQH 330 Query: 61 MKLYKKLNVKSDLTLWRDVFLRFKAYLQPKNIICDNF-NSSVLPVVSSKGESMAHYNIYY 119 + +L +DL ++ + I + S L + + + ++Y Sbjct: 331 GNSFDELMRHADLAMYHAKEAGRNTFRFFSEDIRSSVTESLHLISSLRQAVTQEEFVLHY 390 Query: 120 QPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHI----NKLFS 175 QP+Y+ +G + G + + +N + I + + + + Sbjct: 391 QPVYDLHSGRLLGAEALVRWQNPKLGMVSP-GLFITLAEKSGLIVDIGQWVLTEACRQMQ 449 Query: 176 PIKNNLPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRY 235 + F+++N++P ++E ++ G + +L L+ + ++ ++ Sbjct: 450 AWRQQGATDLFVSVNLSPVQFSRGNVEAVIAQALRETGLDPRQLELEVTESTLIHDTEKF 509 Query: 236 QSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTI 295 ++L RI+++ + +S++DFG GY+ LS+LQ P + + ++ + + + I Sbjct: 510 ITTLGRIQHSGIRMSIDDFGTGYSNLSYLQRFPVHKLKIDQSFVRRLMQGQKDVAMVSAI 569 Query: 296 IDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLLASL 350 I L+K L + V A+G+E + + G +G + P+PA F LA Sbjct: 570 IHLAKSLQLTVTAEGVENEATREALTRMGCDQAQGYLFARPMPAKDFEAYWLARP 624 >UniRef50_Q1N453 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain n=1 Tax=Bermanella marisrubri RepID=Q1N453_9GAMM Length = 800 Score = 489 bits (1260), Expect = e-137, Method: Composition-based stats. Identities = 58/360 (16%), Positives = 135/360 (37%), Gaps = 16/360 (4%) Query: 1 MNTIKIKLNLIDYDSIVNIEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIKT-VSCQ 59 + + + L D +E + I ++L ++ + V SI ++ Sbjct: 444 IGGDEFTVLLND------VENTHGVRHIAEKILKKVCRPIMVKNQEIINTVSIGITLAPT 497 Query: 60 KMKLYKKLNVKSDLTLWRDVFLRFKAYLQPKNIICDNFN-SSVLPVVSSKGESMAH-YNI 117 L +D+ +++ + Y + + + I Sbjct: 498 DGDDVNTLMRNADMAMYQAKAMGRNNYQFFSEEMNKEMMGYLEIEKDLRHSIDYPEDFII 557 Query: 118 YYQPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINKLFSPI 177 YYQP +G G + I K +G I + + H+ + Sbjct: 558 YYQPKIELHSGRFVGAEALIRWK-PEGKDMIPPDRFIPIAEESGLIVPIGAHVIRQACLQ 616 Query: 178 KNN------LPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYI 231 P + IN++ D+ + ++ L + + + Sbjct: 617 VKYMINTGIWPEDGKVAINLSARQFSDPDLICKLQEILEQTKCPVHVLEFEITESTLMDN 676 Query: 232 IRRYQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDII 291 + ++R+I+ + ++++DFG GY+ L++L+ P + + ++ DI ++ I Sbjct: 677 VENAIFTMRQIKEMGISIAIDDFGTGYSSLAYLKRFPIDVLKVDRSFVMDIPNDLNDMEI 736 Query: 292 ATTIIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLLASLK 351 +I ++ +LH+ V+A+GIET++Q ++ +Y +G ++ P+P+D R + L+ Sbjct: 737 TAAVIAMAHKLHLQVVAEGIETQEQIDFLKSNYCEYGQGFMIARPMPSDELERFIQRPLQ 796 >UniRef50_A0L8P4 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Magnetococcus sp. MC-1 RepID=A0L8P4_MAGSM Length = 754 Score = 489 bits (1260), Expect = e-137, Method: Composition-based stats. Identities = 60/352 (17%), Positives = 135/352 (38%), Gaps = 13/352 (3%) Query: 1 MNTIKIKLNLIDYDSIVNIEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIKT-VSCQ 59 M + + L +I ++ + ++L +L K S+ SI + Sbjct: 390 MGGDEFTVIL------ADISDNESVARVARKVLEELQKSISIKGHDIFVGASIGIALYPD 443 Query: 60 KMKLYKKLNVKSDLTLWRDVFLRFKAYLQPKN-IICDNFNSSVLPVVSSKGESMAHYNIY 118 + L +D+ ++R Y + L + +Y Sbjct: 444 NGNDVETLTKNADMAMYRAKESGRGNYKFFSEEMNVSTSQRLSLESQLHHAVNANLLEVY 503 Query: 119 YQPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINKL----F 174 YQP N ++G + G + + +DGS I + L + + Sbjct: 504 YQPKLNMQSGIMVGMEALVRWPQADGSMI-PPIQFIPVAEETGLIVPLGRLVMRQAMLDC 562 Query: 175 SPIKNNLPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRR 234 + + +N++ + + + E + G + ++ + ++ + Sbjct: 563 ARWVRETGMNLRVAVNLSAREFQSPGLVVEIEQTLAECGLDARHFEVEITESLMMHDVEN 622 Query: 235 YQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATT 294 ++L +I ++++++DFG GY+ LS+L+ P + + ++ DI + I Sbjct: 623 AIATLEQISRLGIHIAMDDFGTGYSSLSYLKKFPIHSLKVDRSFVKDIPDDPNDIEIVAA 682 Query: 295 IIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKL 346 I+ L+K L++ V+A+G+ET++Q ++ + +G + S PL A F L Sbjct: 683 ILSLAKVLNLKVVAEGVETQEQLSFLRQNLCDECQGYSFSKPLSAVDFTAFL 734 >UniRef50_C9Y9D8 Putative uncharacterized protein n=1 Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9Y9D8_9BURK Length = 897 Score = 489 bits (1260), Expect = e-137, Method: Composition-based stats. Identities = 57/350 (16%), Positives = 127/350 (36%), Gaps = 10/350 (2%) Query: 1 MNTIKIKLNLIDYDSIVNIEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIKTV-SCQ 59 + + + L S + + ++L L YS+ SI V + Sbjct: 541 LGGDEFVVLLEGL-SDNRTDAANQAEVVAHKILDALALPYSLRGHGYNSTPSIGIVVFME 599 Query: 60 KMKLYKKLNVKSDLTLWRDVFLRFKAYLQPKNIICDNFN-SSVLPVVSSKGESMAHYNIY 118 + L K+D+ +++ ++ + L G + ++ Sbjct: 600 DHETMDDLLKKADVAMYQAKAAGRNTARFFDPVMQAAVTTHAELAKEIRLGLQRHEFVLH 659 Query: 119 YQPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINKLFSPIK 178 YQ +++ G G + + + + + I + L + + Sbjct: 660 YQVQIDSQ-GRCTGAEALVRWNHRVRGLVSP-AHFIPLAEETGMILPLGEWVMESACQQL 717 Query: 179 NNL-----PHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIR 233 + + +N++ + + ++ G +L L+ + + + Sbjct: 718 VEWSRNPMTAHWTLAVNVSASQLAQPEFVASVREALQRSGAPAGQLKLELTESMLVDDVE 777 Query: 234 RYQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIAT 293 + I+ V SL+DFG GY+ LS+L+ +P S + + ++ D+ ++ +IA Sbjct: 778 DIIVKMMAIKELGVSFSLDDFGTGYSSLSYLKRLPLSQLKIDQSFVRDVLTDPSDAVIAR 837 Query: 294 TIIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFV 343 T++ L L + VIA+G+ET +Q + +G P PADA + Sbjct: 838 TVVALGHSLGLTVIAEGVETAEQRDALAAMQCDAFQGYYFGRPAPADALI 887 >UniRef50_B3E661 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=cellular organisms RepID=B3E661_GEOLS Length = 1027 Score = 489 bits (1260), Expect = e-137, Method: Composition-based stats. Identities = 56/353 (15%), Positives = 135/353 (38%), Gaps = 7/353 (1%) Query: 2 NTIKIKLNLIDYDSIVN-IEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIKT-VSCQ 59 + + +L ++ I++ I + I +L+ + + ++ SI + + Sbjct: 671 DDVVCRLGGDEFALILHDIHQDQDVVPIAQKLIEAVAQPVPLDGREVVVTASIGIALFPR 730 Query: 60 KMKLYKKLNVKSDLTLWRDVFLRFKAYLQPKNIICDNFN-SSVLPVVSSKGESMAHYNIY 118 K L +D+ L+ + + + L + ++ Sbjct: 731 DGGDVKNLEKHADIALYHAKEEGKNTFRFYLEELNSTISTRIALEQGLRYAKERQELELH 790 Query: 119 YQPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINKLFSPIK 178 YQP +G ++G + + + D + I + + + + + Sbjct: 791 YQPKVCVASGKVSGVEALLRWHSPDFGLVSP-IRFIPLAEQTRLIIPIGEWVLRTACLQQ 849 Query: 179 NNLPHG---FFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRY 235 + +N++ + + + I G + L L+ + + Sbjct: 850 VQWREQGLLLNMAVNLSAIQLKSPGLVERVAAIIDETGIQPEHLELELTESALVNNPDEV 909 Query: 236 QSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTI 295 L R+R +S++DFG GY+ LS+L++ P + + + ++ D+ NS IA ++ Sbjct: 910 VQLLERLRTLGCSISIDDFGTGYSSLSYLKSFPVTILKIDRSFVRDLAHNSGDRAIARSV 969 Query: 296 IDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLLA 348 +DL+ L + +A+G+E+++Q + + G Y++G S P+ AD + Sbjct: 970 VDLANNLDMKTVAEGVESEEQLTILQQIGCTYIQGFIYSRPVQADQVSAVVRR 1022 >UniRef50_Q3JAR2 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=2 Tax=Nitrosococcus oceani RepID=Q3JAR2_NITOC Length = 944 Score = 488 bits (1259), Expect = e-137, Method: Composition-based stats. Identities = 62/354 (17%), Positives = 133/354 (37%), Gaps = 13/354 (3%) Query: 1 MNTIKIKLNLIDYDSIVNIEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIK-TVSCQ 59 + + + + ++ I I +++S K +++ + SI ++ + Sbjct: 592 LGGDEFTVIIENFTDTSAISL------ITQKIISACEKPFNIKGNELFVSASIGVSLYPE 645 Query: 60 KMKLYKKLNVKSDLTLWRDVFLRFKA-YLQPKNIICDNFNSSVLPVVSSKGESMAHYNIY 118 L ++D +++ I L + + + + +Y Sbjct: 646 DGHEASMLLQRADAAMYQAKKRGKSCCQFFTTEINTAATEQLALKNLLRRALARKEFQLY 705 Query: 119 YQPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINKLFSPIK 178 YQPI N ++G I + I + + + + I + + L + + Sbjct: 706 YQPIINMESGAIVSVEALIRWVDPELGLISP-NTFIPLAEENGLILPLGEWVLQTACTQA 764 Query: 179 NNL----PHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRR 234 P+ I IN++ + D +K L L+ + + + Sbjct: 765 KIWNQSNPYPVRIAINLSARQLEQTDFSERVSEILKKTPFPTDHLELELTESMLINRMES 824 Query: 235 YQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATT 294 +L ++ LSL+DFG GY+ L++L+ P V + ++ I + I T Sbjct: 825 SLKTLNTLKKMGCRLSLDDFGTGYSPLAYLKRFPIDTVKIDRSFVQGISIDPDDAAITTA 884 Query: 295 IIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLLA 348 + ++ L VIA G+ET++Q ++ E V +G +S P+PA+ +KL Sbjct: 885 VTTMAHSLKRAVIAKGVETREQLNFLNEIKVDEAQGYFISYPVPAEELTQKLRE 938 >UniRef50_B1M266 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=7 Tax=Proteobacteria RepID=B1M266_METRJ Length = 960 Score = 488 bits (1259), Expect = e-136, Method: Composition-based stats. Identities = 56/349 (16%), Positives = 129/349 (36%), Gaps = 4/349 (1%) Query: 3 TIKIKLNLIDYDSIVN-IEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIKT-VSCQK 60 +L ++ + ++ P + + ++ + YS+ + +I ++ Sbjct: 604 DCVARLGADEFIVVQRGVDRPEDAAILARRIIEVVGAPYSLTHHTISVGLTIGITLAPSD 663 Query: 61 MKLYKKLNVKSDLTLWRDV-FLRFKAYLQPKNIICDNFNSSVLPVVSSKGESMAHYNIYY 119 KL +++ L R R + ++ + + +YY Sbjct: 664 GSNADKLLKNAEVALDRGKTEARGAFRFFEPAMDARLIARRIMERDLRDALAREAFEVYY 723 Query: 120 QPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINKLFSPIKN 179 QPIY+ + I G + + + + ++ I + L + + Sbjct: 724 QPIYSLETDRICGFEALLRWNHPVRGFVSP-AEFIPIAEELGLIVPLGEWVLRRACEEAA 782 Query: 180 NLPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSL 239 P + +N++ + + ++ G RL L+ + + + L Sbjct: 783 RWPDELKVAVNVSAVQFTSASLVTAVREALRRTGLPGRRLELEITETVLVANPGATTAIL 842 Query: 240 RRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLS 299 +R V ++++DFG GY+ LS+L++ PF + + ++ D+ TD I +I L Sbjct: 843 HSLRALGVRVAMDDFGTGYSSLSYLRSFPFDKIKIDQSFVRDLCVKDGTDFIVRAVIGLG 902 Query: 300 KQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLLA 348 L + A+G+ET+ Q ++ G ++G S P+P + Sbjct: 903 ASLGMTTTAEGVETEAQLAHLRAEGCDEVQGYLFSRPVPVSEVASVIRR 951 >UniRef50_Q608F9 Sensory box protein n=1 Tax=Methylococcus capsulatus RepID=Q608F9_METCA Length = 965 Score = 488 bits (1259), Expect = e-136, Method: Composition-based stats. Identities = 59/351 (16%), Positives = 121/351 (34%), Gaps = 14/351 (3%) Query: 2 NTIKIKLNLIDYDSIVNIEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIKT-VSCQK 60 + + L D D++ ++S + K + S+ + Sbjct: 613 GGDEFVVILADSDAVRAARVANA-------MISAIAKPAVAGGRTLIVTPSLGISLYPHD 665 Query: 61 MKLYKKLNVKSDLTLWRDVFLRFKAYLQPKN-IICDNFNSSVLPVVSSKGESMAHYNIYY 119 + L +D ++ L Y + L + S + +YY Sbjct: 666 AGDSESLIKSADAAMYHAKSLGRNTYQFFSAEMSAVATERLALENALHQALSNGEFRLYY 725 Query: 120 QPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINKLFSPIKN 179 QP + + G + I ++ + I + + + + + Sbjct: 726 QPQIEVCSRRLIGLEALIRWRHPEVGWV-PPLRFIPLAEETGIIHRIGRWVLEEACRQQR 784 Query: 180 NLPHG----FFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRY 235 + +N++P + D + + L L+ + + + R Sbjct: 785 EWQAAGLCIVPVAVNLSPLQLQKDDFPEQVEALLSGCRLAPGLLELELTETAVMRDVGRM 844 Query: 236 QSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTI 295 LR+++ S++DFG GY+ L +L P + + ++ D+ I I Sbjct: 845 SDMLRKLKERGTRFSIDDFGTGYSSLGYLNRFPVDKLKIDQSFIRDVTRREDHAAITRAI 904 Query: 296 IDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKL 346 I L+KQLH+ V+A+G+ET +Q ++ G +G S P+PAD L Sbjct: 905 IALAKQLHLKVVAEGVETAEQLEFLERAGCDGAQGFYFSRPVPADEIAGWL 955 >UniRef50_B7KEB0 Diguanylate cyclase/phosphodiesterase n=6 Tax=Bacteria RepID=B7KEB0_CYAP7 Length = 684 Score = 488 bits (1259), Expect = e-136, Method: Composition-based stats. Identities = 52/356 (14%), Positives = 131/356 (36%), Gaps = 13/356 (3%) Query: 2 NTIKIKLNLIDYDSIVNIEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIKT-VSCQK 60 + + + I+ + + S L + + V SI + + Sbjct: 335 GGDEFTILIPQ------IKNEEEIEICAKRVFSILQQPFQVGNHLLYLKASIGVAIYPRD 388 Query: 61 MKLYKKLNVKSDLTLWRDVFLRFKAYLQPKNIIC-DNFNSSVLPVVSSKGESMAHYNIYY 119 + + + +D L+R + Y +I + + + + ++Y Sbjct: 389 GQDAETIIKNADAALYRTKEMGRNHYQIYHPLITSKTSERLEMENLLHQALEKDQFLLHY 448 Query: 120 QPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINKLFSP--- 176 QP N KN I G + I ++ + + I + + + + Sbjct: 449 QPQINIKNQAICGMEALIRWEHPTLGLVSP-AKFIPIAEESGLIISIGEWVLRQACEQNR 507 Query: 177 -IKNNLPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRY 235 + + +N++ + + + E L L+ + + + Sbjct: 508 LWQKKGLPPVRVAVNLSAQQFQQPNFVNIVTKILAETNLEPQFLELEITETTIMKNLEFS 567 Query: 236 QSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTI 295 + +++ V++S++DFG GY+ L +L+ IPF+ + + ++ D++ I + + Sbjct: 568 CQIVHDLKHMGVHISMDDFGTGYSSLGYLKQIPFNTIKIDQSFIKDLQDKPQDLAIISAV 627 Query: 296 IDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLLASLK 351 + + + ++ VIA+G+ET+ Q + + + ++G S PL +A L + Sbjct: 628 LAIGRGFNVRVIAEGVETQHQVELLRKLECEEMQGFKFSKPLKPEAAANFLSNHFR 683 >UniRef50_C6J6G7 Diguanylate cyclase/phosphodiesterase n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6J6G7_9BACL Length = 700 Score = 488 bits (1259), Expect = e-136, Method: Composition-based stats. Identities = 50/355 (14%), Positives = 126/355 (35%), Gaps = 13/355 (3%) Query: 1 MNTIKIKLNLIDYDSIVNIEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIK-TVSCQ 59 M + + + + +LL+ + G +++ + S+ +V Sbjct: 352 MGEDEFAVVFSELP------DAAAAEDRAKQLLASVDPGVLIDDTEYHISLSMGLSVFPN 405 Query: 60 KMKLYKKLNVKSDLTLWRDVFLRFKAYLQPKNIICDNFNSSVLPVVSSKGESMAHYNIYY 119 +L +D+ + + + L K + + + Sbjct: 406 DADSVNELIQFADMAVHHAKEQGVEFLRYHAAMKQRTQAKVELENDMRKALEREEFFLEF 465 Query: 120 QPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINKLFSP--- 176 QP G + G + + + S+ I + L + K Sbjct: 466 QPQIRLDTGKMVGMEALVRWNHPKRGLI-PPSEFIPLAEESGLIVPLGEWVLKTACQYNK 524 Query: 177 -IKNNLPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRY 235 + + +++N++ ++ ++ G + L L+ + Y I Sbjct: 525 KWQMDGFEPVCVSVNLSMRQFRQYNLAEHVNAILREVGLDPQYLELEVTESMT-YDIETA 583 Query: 236 QSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTI 295 L R++ +++S++DFG GY+ L +L+++P + + + ++ + I +TI Sbjct: 584 LDQLHRLKRLGIHISIDDFGTGYSSLYYLKSLPIDRLKIDRAFVKEVMYDGNDAAIVSTI 643 Query: 296 IDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLLASL 350 ++ L + V A+G+E ++Q ++ + +G S P+ A + L+ L Sbjct: 644 TTMAHHLKLKVTAEGVENEEQLEFLKRQRCHEGQGYLFSKPVSAGVLESEFLSRL 698 >UniRef50_B6BGL3 Diguanylate cyclase/phosphodiesterase n=1 Tax=Campylobacterales bacterium GD 1 RepID=B6BGL3_9PROT Length = 671 Score = 488 bits (1259), Expect = e-136, Method: Composition-based stats. Identities = 60/346 (17%), Positives = 131/346 (37%), Gaps = 8/346 (2%) Query: 7 KLNLIDYDSI-VNIEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIKT-VSCQKMKLY 64 + ++ + N++ + + I++ L K + +N SI + + Sbjct: 321 RFGGDEFVFLFSNVQSELTIEKTMIKIHEVLKKPFILNTYEVYTTASIGIAIYPDDAQDA 380 Query: 65 KKLNVKSDLTLWRDVFLRFKAYLQPKN-IICDNFNSSVLPVVSSKGESMAHYNIYYQPIY 123 + L +D+ ++ Y ++ + N +L K + +QP Sbjct: 381 ELLLRNADVAMYDAKQSGRSKYSFFNADMLNLSSNRLMLESELHKALENNELFLLFQPQV 440 Query: 124 NAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINKLFSP----IKN 179 + N I G + I ++ + D I N + + I K+ Sbjct: 441 SLWNEKIVGVEALIRWQHPTKGLISP-LDFIPIAENSGLIMPIGEWIIDQACDQLALWKD 499 Query: 180 NLPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSL 239 ++IN++ + +L D+ I+ + L L+ + + I L Sbjct: 500 THMSEATLSINVSAKQVLHQDLYSYIEAAIERTKIDGRFLELEITESVIMENINETVRIL 559 Query: 240 RRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLS 299 R++ V ++++DFG GY+ LS+L+ +P + + + DI ++ I II +S Sbjct: 560 SRLKKLGVSIAIDDFGTGYSSLSYLKKLPIDKLKIDREFIKDIPNDKDDIAITNAIISMS 619 Query: 300 KQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRK 345 K L + ++A+G ETK+ ++ +G S P+ + Sbjct: 620 KSLSLKIVAEGPETKEHIEFLQNSKCDIAQGFYYSKPITIVEVEKL 665 >UniRef50_D2XIQ4 Putative signal transduction protein n=1 Tax=uncultured bacterium 9F08 RepID=D2XIQ4_9BACT Length = 965 Score = 488 bits (1258), Expect = e-136, Method: Composition-based stats. Identities = 57/351 (16%), Positives = 129/351 (36%), Gaps = 13/351 (3%) Query: 2 NTIKIKLNLIDYDSIVNIEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIK-TVSCQK 60 + + L + D +EI LL ++ + ++E S+ ++ + Sbjct: 482 GGDEFVIVLSEPD------NGEDAAEIGRRLLQRIAEPVWIDEHELYTTASVGVSLFPRD 535 Query: 61 MKLYKKLNVKSDLTLWRDVFLRFKAYLQPKNIICDNF-NSSVLPVVSSKGESMAHYNIYY 119 L +D ++R L + + + + ++Y Sbjct: 536 GTDVDTLLRNADAAMYRAKHLGRNNLQFYSEEMNLSLSKRLRMLSQLRQAVERNELCLHY 595 Query: 120 QPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINKLFSP--- 176 QP + G + G + + ++ + + ++ I + + + + Sbjct: 596 QPQASLPGGRLLGVEALVRWQHPELGMVSP-AEFIPLAEESGLIEPIGEWVLREACRQGV 654 Query: 177 -IKNNLPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRY 235 I++N++ ++ ++ G RL L+ + + ++ Sbjct: 655 AWDRAGFMPLRISVNLSARQFDNPKLDDTIRDVLEQTGLAPERLELELTETALIANPQQS 714 Query: 236 QSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTI 295 L IR+ V L+L+DFG GY+ L++LQ F + + ++ D N I T+ Sbjct: 715 VQRLSAIRDLGVRLALDDFGTGYSSLAYLQRYTFDLIKIDRSFVADAIRNPGNAAIVRTV 774 Query: 296 IDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKL 346 I +++ L + IA+G ET + ++ G ++G +S PLPA + Sbjct: 775 IAMARLLGSETIAEGAETAETITFLGRNGCDAVQGYYISRPLPAGEIEQLF 825 >UniRef50_B4B904 Diguanylate cyclase/phosphodiesterase with GAF sensor n=2 Tax=Cyanobacteria RepID=B4B904_9CHRO Length = 1297 Score = 488 bits (1257), Expect = e-136, Method: Composition-based stats. Identities = 58/347 (16%), Positives = 132/347 (38%), Gaps = 12/347 (3%) Query: 6 IKLNLIDYDSIVNIEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIKT-VSCQKMKLY 64 + L + +LL+ + + V + SI ++ Sbjct: 515 FIVLLSQLAYVD------EAINFSQKLLNDFQEPFYVQSQAIYLGVSIGIALAPYDGDSS 568 Query: 65 KKLNVKSDLTLWRDVFLRFKAYLQPKNIICDNFNSSVLPVVSSKGESMAHYNIYYQPIYN 124 + L ++ +++ Y + +FN +L K + ++YQP Sbjct: 569 EVLLKNAESAMYQAKQQGKNTYQLYRPGSNQDFNKLILEADLRKAIERNEFVLHYQPQIE 628 Query: 125 AKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINKLFSP----IKNN 180 G + G + I ++ + + I + + K + Sbjct: 629 LATGKLIGVEALIRWQHPCLGMVSP-ALFIPLAEETGLICPIGEWALKTACHQYQIWQQA 687 Query: 181 LPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSLR 240 + +N++ + DI I+ L L+ + + + R S + Sbjct: 688 GLPKIQMAVNLSAFQLQQYDIVARIAKIIQETRINPRDLELEITETTVIQNLERMTSIIE 747 Query: 241 RIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSK 300 +++ + ++++DFG GY+ L+ L+++P + + + K+ D+ ++ + II L K Sbjct: 748 QLKQMGIKIAIDDFGTGYSSLNVLKHLPVNTLKIDKSFVQDLSNDPNDAKLCQAIIMLGK 807 Query: 301 QLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLL 347 ++V+A+G+ET KQ ++ G + +G +S P+P DA + LL Sbjct: 808 AFKLEVLAEGVETIKQLEFLKNCGCDHAQGFLISRPVPPDALLGSLL 854 >UniRef50_B2UJ08 Diguanylate cyclase/phosphodiesterase n=5 Tax=Ralstonia RepID=B2UJ08_RALPJ Length = 670 Score = 488 bits (1257), Expect = e-136, Method: Composition-based stats. Identities = 50/365 (13%), Positives = 123/365 (33%), Gaps = 28/365 (7%) Query: 7 KLNLIDYDSIVNIEFPCLLSE---------IEIELLSQLLKGYSVNEISKRRNRSIK-TV 56 ++ ++ I + ++E + +L+ L +S++ S+ ++ Sbjct: 278 RIGGDEFAVIAELSGRAQIAETEAATLADGLAKRILAALGAPFSLDLHQIYVTASVGVSL 337 Query: 57 SCQKMKLYKKLNVKSDLTLWRDVFLRFKAYL-QPKNIICDNFNSSVLPVVSSKGESMAHY 115 + + L +D ++ A + + + Sbjct: 338 YPHDARDVQVLTRNADTAMYHAKNHGKNAAASFTSEMDQQARRRLRVEADLRRALDREEL 397 Query: 116 NIYYQPIYNAKNG----------NIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSY 165 + YQP N+ G + + ++ + + I + Sbjct: 398 LLAYQPQVRLSTDDAHDAVISRANVYGVEALVRWRHPEIGLIGP-GEFIAVAEETGLIVP 456 Query: 166 LFGHINKLFSPIKNNLPHG----FFITININPEDILTCDIERECLHFIKVFGTERIRLVL 221 L + + + +N++ + + ++ G +L L Sbjct: 457 LGLWVLRTACQQAVRWMREDGVTLRVAVNLSARQTRDPALVENVMDVLRETGMPPHQLEL 516 Query: 222 QFSTKEELYIIRRYQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHD 281 + + + I + L + + LS++DFG GY+ L++LQ P + + ++ Sbjct: 517 EITESVLMEDIEANIALLESLHAAGISLSIDDFGTGYSSLAYLQRFPIQKLKIDRSFVQR 576 Query: 282 IESNSLTDIIATTIIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADA 341 + + IA +I ++ L + V+A+G+E +Q + + G +G S P ADA Sbjct: 577 MPGDGE--AIAGAVIAMAHSLRMQVVAEGVEDPEQLALLRDAGCDLGQGYLFSRPQQADA 634 Query: 342 FVRKL 346 + L Sbjct: 635 LMAWL 639 >UniRef50_D1C8G6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C8G6_SPHTD Length = 760 Score = 487 bits (1256), Expect = e-136, Method: Composition-based stats. Identities = 49/322 (15%), Positives = 111/322 (34%), Gaps = 9/322 (2%) Query: 38 KGYSVNEISKRRNRSIKTVSCQKMKL-YKKLNVKSDLTLWRDVFLRFKAYLQPK-NIICD 95 + + V+ SI + L +D + R L + + Sbjct: 430 EPFVVDGHELVITTSIGVALGGDPDDRPEDLIRNADAAMHRAKLLGKARRVVFDPAMYAQ 489 Query: 96 NFNSSVLPVVSSKGESMAHYNIYYQPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRIN 155 L G + IYYQP+ + + + + + + + + I Sbjct: 490 AVERLALERDLRHGLERGEFQIYYQPVLDVRTRRPVEVEALVRWHHPERGLISP-GEFIP 548 Query: 156 YNPNDNKVSYLFGHINKLFSPIKNNLPHGFF------ITININPEDILTCDIERECLHFI 209 + L + F +++N++ + + + Sbjct: 549 IAEETGLIVPLGHWVLAEACRQLAAWRTAFPDCAPSAVSVNLSARQFRHPSLTADIAQIL 608 Query: 210 KVFGTERIRLVLQFSTKEELYIIRRYQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPF 269 G L L+ + + +LR ++ V L+++DFG GY+ LS+L+ P Sbjct: 609 AETGLPPASLKLEITESVMMDDTASTLEALRDLKQLGVQLAVDDFGTGYSSLSYLKRFPT 668 Query: 270 SYVNLHKTMFHDIESNSLTDIIATTIIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLK 329 + + ++ ++ + + +I + L + V +G+ET++Q ++ G ++ Sbjct: 669 DAMKIDRSFARGLDQSREDQALVEAMIAAANALRLQVTVEGVETEEQLEFLERVGCDLVQ 728 Query: 330 GIALSSPLPADAFVRKLLASLK 351 G + P+P D R L L+ Sbjct: 729 GFLFAPPMPPDEVARFLHTGLQ 750 >UniRef50_D2LYI1 Diguanylate cyclase/phosphodiesterase with extracellular sensor n=1 Tax=Bacillus cellulosilyticus DSM 2522 RepID=D2LYI1_BACS4 Length = 774 Score = 487 bits (1255), Expect = e-136, Method: Composition-based stats. Identities = 54/342 (15%), Positives = 130/342 (38%), Gaps = 8/342 (2%) Query: 7 KLNLIDYDSIVNIEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIKT-VSCQKMKLYK 65 +L ++ + +S I ++L + + +N + SI V + + Sbjct: 434 RLGGDEFLILSKDASIEKVSNIAKKILKDMANPFIINSKEFFTSPSIGISVYPKDGQTKD 493 Query: 66 KLNVKSDLTLWRDVFLRFKAYLQPKNIICDNF-NSSVLPVVSSKGESMAHYNIYYQPIYN 124 + +D ++ Y + ++ K + +YYQP + Sbjct: 494 DIIKHADTAMYVAKENGGNNYQFYTPEPTNLLSKKYIIENDLRKALKNEEFLLYYQPQVD 553 Query: 125 AKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGH----INKLFSPIKNN 180 K+G++ G + I ++ D I ++++ + + N Sbjct: 554 LKSGDLVGLEALIRWQHPKLGLI-PPMDFIPIAEETGYINHIGKWLIKEACRQNKQWQQN 612 Query: 181 LPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSLR 240 + +N++P + + + L L+ + ++ + Sbjct: 613 GSFYIPVAVNVSPWQFRDKNFVENIKAALDETNLDPKYLELEITESM-MHHFIDTIDKVH 671 Query: 241 RIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSK 300 +++ + ++++DFG GY+ L+ + +P + + ++ D+ +N I TIIDL Sbjct: 672 QVKEMGIKVAIDDFGTGYSSLNAIDQLPIDTLKIDRSFIRDMITNDSKAAIVKTIIDLGN 731 Query: 301 QLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAF 342 LH++ IA+G+E ++QA ++ + +G S PLP + Sbjct: 732 NLHLNTIAEGVEYEEQATFLANQDCVKAQGYLFSKPLPPEQL 773 >UniRef50_Q3MFD3 Diguanylate cyclase/phosphodiesterase n=4 Tax=Nostocaceae RepID=Q3MFD3_ANAVT Length = 576 Score = 487 bits (1255), Expect = e-136, Method: Composition-based stats. Identities = 62/354 (17%), Positives = 139/354 (39%), Gaps = 14/354 (3%) Query: 1 MNTIKIKLNLIDYDSIVNIEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIKTVS--C 58 ++ + + ++ SI + ++ LLS L K +++ SI Sbjct: 212 LSGDEFAIARVEIPSI------ESIVKLSQLLLSALNKPFTIKGDQIHITASIGITINQP 265 Query: 59 QKMKLYKKLNVKSDLTLWRDVFLRFKAYLQPK-NIICDNFNSSVLPVVSSKGESMAHYNI 117 + +L ++ + L++ + I L + Sbjct: 266 DNLHDVDQLLQQAHVALYQAKQQGRSQHQFYSPEINAQLQERLALENELHGALQRNEIVV 325 Query: 118 YYQPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINKLFS-- 175 YYQPI + + I + + ++ + + I + + + + + Sbjct: 326 YYQPIIDLQTQQITAVEALVRWQHPTRGLVSP-AKFIPIAEANGLIVEIGEWVLRTACLQ 384 Query: 176 --PIKNNLPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIR 233 + +++N++ ++ I+ G L L+ + + I+ Sbjct: 385 NRAWQLAGLPPIRMSVNLSARQFEESNLVELVGEIIQESGLHPSYLELEVTESSLMADIQ 444 Query: 234 RYQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIAT 293 R + L+++R V+L+L+DFG GY+ L++L+ P + + + ++ D+ SN + + Sbjct: 445 RSVTILKQLRELGVWLALDDFGTGYSSLNYLKRFPVNMLKIDRSFVQDVCSNPDSAAVTN 504 Query: 294 TIIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLL 347 II L+K L + + A+GIET++Q Y+ +RG + +G P PA+ L Sbjct: 505 AIIALAKSLQLKITAEGIETQQQLSYLQKRGCQEGQGYYFGIPAPANEITEILQ 558 >UniRef50_C7RS22 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RS22_9PROT Length = 1006 Score = 487 bits (1255), Expect = e-136, Method: Composition-based stats. Identities = 56/355 (15%), Positives = 133/355 (37%), Gaps = 10/355 (2%) Query: 1 MNTIKIKLNLIDYDSIVNIEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIKTVSCQK 60 + + + L + E + +++ L + Y ++ S+ Sbjct: 655 LGGDEFVVMLENLGERPE-EAAGQSRIVGEKIIKLLNRPYDLSGHDYHNTPSVGITLFGG 713 Query: 61 MKL-YKKLNVKSDLTLWRDVFLRFKAYLQPKNIICDNF-NSSVLPVVSSKGESMAHYNIY 118 ++ +L ++DL ++ A + + + + + Sbjct: 714 QQVGIDELMKRADLAMYEAKASGRNALRFFDPRMQAVVTARADIEKDLRAAVGRQSFFLA 773 Query: 119 YQPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINKLFSPIK 178 YQP + +G + G + + ++ + ++ I + L + + Sbjct: 774 YQPQVD-ASGQVIGAEALLRWQHQQRGTVSP-AEFIPVAEETGLILPLGLWVLETACAQA 831 Query: 179 -----NNLPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIR 233 F +++N++ + + L + G L L+ + L ++ Sbjct: 832 ALWAARPGRERFTVSVNVSARQFRQANFVDQVLAVLARSGAHPRNLKLELTESMLLDNVQ 891 Query: 234 RYQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIAT 293 + + ++ V SL+DFG GY+ LS+L+ +P + + ++ D+ ++ ++IA Sbjct: 892 DIIAKMSALKARGVGFSLDDFGTGYSSLSYLKQLPLDQLKIDQSFVRDLLTDPNDEVIAR 951 Query: 294 TIIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLLA 348 TII L++ L + VIA+G+E+ +Q + +G +G S PL F L Sbjct: 952 TIIALARTLGLSVIAEGVESVEQQDALAAQGCLAYQGYLFSRPLALADFEAFLRR 1006 >UniRef50_Q2W4Z4 Predicted signal transduction protein containing a membrane domain n=4 Tax=Magnetospirillum RepID=Q2W4Z4_MAGSA Length = 831 Score = 487 bits (1255), Expect = e-136, Method: Composition-based stats. Identities = 53/352 (15%), Positives = 139/352 (39%), Gaps = 14/352 (3%) Query: 1 MNTIKIKLNLIDYDSIVNIEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIKT-VSCQ 59 + + + L + I S + ++L+ L ++ SI + Sbjct: 476 LGGDEFTVILDE------ISAANDASMVADKILASLHAPIFIDGRDVFIGTSIGISLFPI 529 Query: 60 KMKLYKKLNVKSDLTLWRDVFLRF-KAYLQPKNIICDNFNSSVLPVVSSKGESMAHYNIY 118 +L +D +++ + + + L + + ++ Sbjct: 530 DGTSGDELLKHADTAMYQAKAAGKGRFNFYSAEMTKREEHRLELETALRQAVEEGQFQVH 589 Query: 119 YQPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINKLFS--- 175 YQP N ++G + + ++ + D I + + + + + Sbjct: 590 YQPQKNLATNRVSGFEALVRWQHPRLGMISP-VDFIPLAEEMHLIDRIDMFVMRQACRKG 648 Query: 176 -PIKNNLPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRR 234 ++ + + +N++ + D+ + ++ G L L+ + + + Sbjct: 649 RQWRDQG-YDICMAVNLSGVNFSRDDLPEQVRQVLEDTGFPAENLELEITESFVIDLEVD 707 Query: 235 YQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATT 294 + L+R+R V L+++DFG GY+ LS+L+ +P + + + ++ DI +S ++ ++ Sbjct: 708 QREVLQRLRALGVKLAIDDFGTGYSSLSYLKRLPVNTLKIDRSFVRDIARDSRDMMLVSS 767 Query: 295 IIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKL 346 II ++ L + V+A+GIE + Q ++ + ++G ++ P+PA+ L Sbjct: 768 IIGIAHSLGLKVVAEGIEERDQLAILLSQECDEIQGYLIAKPMPAEQAGIFL 819 >UniRef50_C6WTL1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylotenera mobilis JLW8 RepID=C6WTL1_METML Length = 976 Score = 487 bits (1255), Expect = e-136, Method: Composition-based stats. Identities = 62/355 (17%), Positives = 138/355 (38%), Gaps = 10/355 (2%) Query: 1 MNTIKIKLNLIDYDSIVNIEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIKT-VSCQ 59 + + L + + S ++E + I ++L L + Y + SI + Sbjct: 614 LGGDEFVLLVENL-SANDVEAAHQIEAIGDKILMSLNQPYQLQSHEYLSTPSIGISLFNG 672 Query: 60 KMKLYKKLNVKSDLTLWRDVFLRFKAYLQPKNIICDNFN-SSVLPVVSSKGESMAHYNIY 118 + + L +D+ +++ ++ + N L K + +Y Sbjct: 673 HQESSEDLLKHADIAMYQAKKAGRNTLRFFDPLMQETINMRVDLERELKKAIEQKQFELY 732 Query: 119 YQPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINKLFSPIK 178 YQ N+ G +G + I ++ + + I ++ + + Sbjct: 733 YQVQMNSA-GQPSGAEALIRWRHPERGIISP-IQFIPVAEETGLITQIGEWVLNQACLQL 790 Query: 179 NNLP-----HGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIR 233 F + IN++ + L D + + I+ F + +L L+ + + I Sbjct: 791 QAWQLDQASKDFSLAINVSAKQFLQPDFANQVKNSIRSFHIDNTKLKLELTESMLIDNIE 850 Query: 234 RYQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIAT 293 ++ + + SL+DFG GY+ L +L+ +P S + + ++ D+ +++ I Sbjct: 851 YVIHTMNTLGEIGIQFSLDDFGTGYSSLQYLKMLPLSQLKIDQSFVRDLATDNSNKTIVL 910 Query: 294 TIIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLLA 348 TII ++ L ++VIA+G+ET +Q + G +G S PL + F + + Sbjct: 911 TIITMAHSLGLNVIAEGVETDEQLQLLNAHGCGNYQGYYFSEPLSINEFNHQYMQ 965 >UniRef50_A1SY75 Diguanylate cyclase/phosphodiesterase n=1 Tax=Psychromonas ingrahamii 37 RepID=A1SY75_PSYIN Length = 591 Score = 486 bits (1254), Expect = e-136, Method: Composition-based stats. Identities = 62/353 (17%), Positives = 133/353 (37%), Gaps = 10/353 (2%) Query: 1 MNTIKIKLNLIDYDSIVNIEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIKTVSCQK 60 + + L L + D IE I ++L++L K Y ++ SI V Sbjct: 236 LGGDEFMLILENLDENP-IEAATKAKAIADKILAELNKPYQLDMHKCHSTVSIGAVFFDH 294 Query: 61 -MKLYKKLNVKSDLTLWRDVFLRFKAYLQPKNIICDNFN-SSVLPVVSSKGESMAHYNIY 118 + L ++D+ +++ + ++ N L + +++Y Sbjct: 295 QGNTAEDLIKQADIAMYQAKQAGGNLIRFFNPKMQESINARITLENELRIAIEKSQFHLY 354 Query: 119 YQPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINKLFSPIK 178 YQ + + + G + I N + + I + + + + Sbjct: 355 YQIQMD-SDNRVLGAEALIRWTNPEHGLVLP-ATFIPIAEETGLILSIGKWVIETACAQI 412 Query: 179 NNLP-----HGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIR 233 + +N++ + D + ++ L L+ + Y Sbjct: 413 KVWQKKSQTRDLTLAVNVSAKQFRQKDFVDQVQSAVQRHAIPGNLLKLELTESLLQYDTE 472 Query: 234 RYQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIAT 293 + ++ + V SL+DFG GY+ L +L+ +P + ++ DI +++ I Sbjct: 473 VTIAMMKALNKIGVQFSLDDFGTGYSSLQYLKRLPLDQFKIDQSFVRDIATDNNDKAIVK 532 Query: 294 TIIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKL 346 II +++ L IDVIA+G+ET++Q ++ +G +G S P+P D F + Sbjct: 533 AIIAMAQILDIDVIAEGVETEEQQQLLLGKGCTLYQGYLFSKPIPIDQFDALI 585 >UniRef50_C5V4D8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V4D8_9PROT Length = 1138 Score = 486 bits (1254), Expect = e-136, Method: Composition-based stats. Identities = 53/356 (14%), Positives = 128/356 (35%), Gaps = 10/356 (2%) Query: 1 MNTIKIKLNLIDYDSIVNIEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIKT-VSCQ 59 + + + L + S + + ++L L Y + + SI + C Sbjct: 779 LGGDEFVVLLDNL-SHGHDNAGAHTKRVAEKILQALNLSYMLQGYEYHSSPSIGVALFCA 837 Query: 60 KMKLYKKLNVKSDLTLWRDVFLRFKAYLQPKNII-CDNFNSSVLPVVSSKGESMAHYNIY 118 +L ++D +++ + L +Y Sbjct: 838 DASSPDELLKRADSAMYQSKAAGRNTVRFYDERTQALLLARAELEHALHHALEQQQLMLY 897 Query: 119 YQPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINKLFSPIK 178 YQ N + G +V + + + + I + + + + Sbjct: 898 YQVQVN-ADYQPVGAEVLLRWFHPVLGMISP-AQFIPLAEESGMIIPIGYWVLEQACDQL 955 Query: 179 NNLPHG-----FFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIR 233 + +N++ D ++ + G RL L+ + ++ + Sbjct: 956 KRWASDVFKCDLVLAVNVSIRQFHEADFAQKVQALVTDSGISPDRLKLEITESMLVHDVE 1015 Query: 234 RYQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIAT 293 +++++++ + S++DFG GY+ LS ++ +P + + ++ DI + I Sbjct: 1016 NIIATMQQLKKIGLNFSMDDFGTGYSSLSSIKRLPLDQLKIDQSFVRDIGHDEHDKAIVR 1075 Query: 294 TIIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLLAS 349 TII +++ + +++IA+GIET++Q + +G +G S P+P F L + Sbjct: 1076 TIIAMAQSMKLNIIAEGIETEQQRRLLALKGCTNYQGYLFSKPVPLSDFEGLLSRA 1131 >UniRef50_Q31G31 Diguanylate cyclase/phosphodiesterase n=1 Tax=Thiomicrospira crunogena XCL-2 RepID=Q31G31_THICR Length = 891 Score = 486 bits (1254), Expect = e-136, Method: Composition-based stats. Identities = 59/354 (16%), Positives = 133/354 (37%), Gaps = 13/354 (3%) Query: 1 MNTIKIKLNLIDYDSIVNIEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIKT-VSCQ 59 + + + + + + ++ + +++ L VNE SI + Sbjct: 539 LGGDEFTILIDELKTN------NVIINVVKKIIKTLSDPIFVNENIFHITASIGISIFPN 592 Query: 60 KMKLYKKLNVKSDLTLWRDVFLRFKAY-LQPKNIICDNFNSSVLPVVSSKGESMAHYNIY 118 +L +D +++ Y K + +N ++ + +Y Sbjct: 593 DGTDANQLLQNADAAMYQAKEDGKNTYHFYTKEMTEQAYNRLLMENNLRDALDNQQFELY 652 Query: 119 YQPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHIN----KLF 174 YQP + I G + + + D I + L I + Sbjct: 653 YQPQVDITTNKIVGFEALVRWNHEQKGIIPPD-HFIPLAEETGLIIPLGKQIIAMASQTI 711 Query: 175 SPIKNNLPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRR 234 S I IN++ + + + + + ++ + + Sbjct: 712 SEWHQANLTNARIAINVSAKQLRDSRFFHNLNTALNKNNCQPDWIEIEITESSVMQNPEL 771 Query: 235 YQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATT 294 L ++R + +S++DFG GY+ L++L+ +P + V + ++ ++ + I Sbjct: 772 AIKLLSKLRRKGITISIDDFGTGYSSLAYLKKLPITKVKIDRSFVSNLPQDKDDAEITKA 831 Query: 295 IIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLLA 348 II +S+ L++D+IA+GIET++Q ++++ G K ++G S PL A KL + Sbjct: 832 IISMSQSLNLDIIAEGIETQEQQNFVLQEGCKLIQGYYYSRPLTKKAMTAKLES 885 >UniRef50_A1SZA9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=6 Tax=Psychromonas ingrahamii 37 RepID=A1SZA9_PSYIN Length = 777 Score = 486 bits (1254), Expect = e-136, Method: Composition-based stats. Identities = 59/356 (16%), Positives = 139/356 (39%), Gaps = 10/356 (2%) Query: 1 MNTIKIKLNLIDYDSIVNIEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIKTVSCQK 60 + + + L + S+ IE ++ +++ +L + Y +N SI Sbjct: 425 LGGDEFVVLLENL-SLQAIEAANKAKKVAKKIIFELAQYYQLNMHRYHSTTSIGVTIFSG 483 Query: 61 MKL-YKKLNVKSDLTLWRDVFLRFKAYLQP-KNIICDNFNSSVLPVVSSKGESMAHYNIY 118 + ++L ++D+ +++ + K + + + K + ++ Sbjct: 484 NETGIEELLKQADIAMYQSKAAGRNTWHFFNKTMQESIIARADMERDLRKAIEDNQFQLH 543 Query: 119 YQPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINKLFSPIK 178 YQ + +G G + I ++ + + + I + + + Sbjct: 544 YQAQVS-SSGQTLGAEALIRWQHPERGQVSPFN-FIPLAEETGLILPIGQWVLDSACAQL 601 Query: 179 NNLP-----HGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIR 233 + +NI+ + + D + +K RL L+ + + I Sbjct: 602 KAWQKNPLTQDLVLAVNISAKQLHQEDFVEQVKATLKRHDINPARLKLELTESMLVENIS 661 Query: 234 RYQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIAT 293 + + + + SL+DFG GY+ L +L+ +P + + + ++ D+ +++ I Sbjct: 662 DIITKMNILSKIGISFSLDDFGTGYSSLQYLKKLPLNQIKIDQSFVRDLITDASDRAIVR 721 Query: 294 TIIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLLAS 349 TII +S L I VIA+G+ET ++ Y+++ G + +G S P+P + F L Sbjct: 722 TIITMSHSLDISVIAEGVETVEERQYLLDNGCTHYQGYLFSKPVPINEFEVLLKKG 777 >UniRef50_Q1H3Y9 Diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(S) n=1 Tax=Methylobacillus flagellatus KT RepID=Q1H3Y9_METFK Length = 858 Score = 486 bits (1253), Expect = e-136, Method: Composition-based stats. Identities = 58/358 (16%), Positives = 137/358 (38%), Gaps = 8/358 (2%) Query: 3 TIKIKLNLIDYDSIVNIEFPCL-LSEIEIELLSQLLKGYSVNEISKRRNRSIKTVS-CQK 60 + +L ++ +++ + + E+L +L + Y + + SI Sbjct: 499 GMVARLGGDEFVIVLDCPQATQIVGRVAKEVLQRLAQPYLIEGYELHSSSSIGIGVSPHD 558 Query: 61 MKLYKKLNVKSDLTLWRDVFLRFKAYLQPKNIICDNF-NSSVLPVVSSKGESMAHYNIYY 119 L D ++ + + + + + + ++Y Sbjct: 559 GSDPYSLLKNIDTAMYAAKSSGKNNFKFFTEKMREQINERMQMENHLRQAILRNEFELHY 618 Query: 120 QPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHI----NKLFS 175 QP + G I G + + + + + I N V L + + S Sbjct: 619 QPQVDLGTGRIIGMEALVRWNHPEWGMVHPE-KFIRVAEECNLVIPLGEWVLCEACRQIS 677 Query: 176 PIKNNLPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRY 235 I++NI+ + + + + + + L L+ + + + Sbjct: 678 QWSRQGLEAVCISVNISARQLKSRYLFTLIDNLMMTHQIKPGMLELEITESAVMDDPEQT 737 Query: 236 QSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTI 295 ++ ++N V L+++DFG GY+ LS+L+ +P + + + ++ DIE++ I Sbjct: 738 IPRMKELKNKGVALAIDDFGTGYSSLSYLKLLPLTRLKIDRSFVKDIETDPNDAAICAAT 797 Query: 296 IDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLLASLKQV 353 I L++ L + ++A+G+ET+ Q Y+ +G +G S PLPA+ + + ++V Sbjct: 798 IALARTLGLGLVAEGVETEAQLEYLRAQGCDSAQGYYFSKPLPANNIMAFVSRHQQEV 855 >UniRef50_B8HRI7 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Cyanothece sp. PCC 7425 RepID=B8HRI7_CYAP4 Length = 744 Score = 486 bits (1253), Expect = e-136, Method: Composition-based stats. Identities = 55/364 (15%), Positives = 139/364 (38%), Gaps = 19/364 (5%) Query: 1 MNTIKIKLNLIDYDSIVNIEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIKTVSCQK 60 + + + L + + P ++ I L L +++ + SI Sbjct: 359 LGGDEFAILLEE------LSNPDIVHRIAERLQRVLSAPFTLKQHELFTTASIGIALGTS 412 Query: 61 M-KLYKKLNVKSDLTLWRDVFLRFKAYLQP-KNIICDNFNSSVLPVVSSKGESMAHYNIY 118 + + + +D+ +++ ++ + + L + + Sbjct: 413 YYEQPEAILRDADIAMYQAKTQGKARHIIFDQAMHTRAVKRWQLESDLRWAIERREFCLV 472 Query: 119 YQPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHI----NKLF 174 YQPI + + + G + + + + ++ I+ + L + + Sbjct: 473 YQPIVSIQTERLIGFEALVRWHHPQRGWISP-AEFISVAEETGLIIPLGHWVLWEGCRQL 531 Query: 175 SPIKNNLP------HGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEE 228 ++ +++N++ + D+ ++ G E L L+ + Sbjct: 532 RQWQSQFNLSPTAEPPLTVSVNLSSKQFCQPDLIHYIQQVLQQTGMEGTCLKLELTESIL 591 Query: 229 LYIIRRYQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLT 288 + + S L +++ + L+L+DFG GY+ LS+L P + + ++ + IE+ + Sbjct: 592 MENLSTATSLLVQLKELGIQLALDDFGTGYSSLSYLHRFPLDVLKIDRSFINGIEAETEN 651 Query: 289 DIIATTIIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLLA 348 I TI+ L++ L++ V+A+G+ET+ Q ++ Y +G +S PL + + L Sbjct: 652 LEIVRTILSLARSLNLQVVAEGVETQAQLDHLQALQCGYAQGYLISRPLTPEKTEQFLQE 711 Query: 349 SLKQ 352 L+ Sbjct: 712 YLQS 715 >UniRef50_C6P6X8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P6X8_9PROT Length = 713 Score = 486 bits (1253), Expect = e-136, Method: Composition-based stats. Identities = 64/359 (17%), Positives = 147/359 (40%), Gaps = 13/359 (3%) Query: 1 MNTIKIKLNLIDYDSIVNIEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIKTVSCQK 60 + + + L D S ++E + ++L+ L + Y + + R SI Sbjct: 357 LGGDEFVVMLEDL-SEKDLEAAAQTEAVGEKILAALNQPYQLGKHEYRNTPSIGATLFND 415 Query: 61 MK-LYKKLNVKSDLTLWRDVFLRFKAYLQPKNIICDNFN-SSVLPVVSSKGESMAHYNIY 118 + +L ++D+ +++ A + + N + L K + + ++ Sbjct: 416 HQQSLDELLKQADIAMYQAKRAGRNALRFFDPQMQETINSRATLENELRKALELHQFYLF 475 Query: 119 YQPIYNA----KNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINKLF 174 YQ ++ + G + I + + + + I + + + Sbjct: 476 YQVQVDSVQEDGSHRATGAEALIRWAHPERGLVSP-AQFIPLAEETGLIVPIGLWVLDTA 534 Query: 175 SPIKNNLPH-----GFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEEL 229 H G + +N++ + D + ++ G + L L+ + L Sbjct: 535 CAQLKTWQHDALTRGLVLAVNVSAKQFRQPDFVAQVDAAVQRHGIDPKLLKLELTESLLL 594 Query: 230 YIIRRYQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTD 289 I+ +++ +R + SL+DFG GY+ L +L+ +P + + ++ D+ S+S Sbjct: 595 ENIQDTIATMNALREIGIRFSLDDFGTGYSSLQYLKQLPLDQLKIDQSFICDLVSDSSDR 654 Query: 290 IIATTIIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLLA 348 I TII +++ L+++VIA+G+ET+ Q ++E+G + +G S P+P + F +L Sbjct: 655 AIVRTIIAMAQSLNLNVIAEGVETEAQRQILLEKGCIHHQGYLFSKPVPINQFEAQLRR 713 >UniRef50_Q7P0M4 Putative uncharacterized protein n=1 Tax=Chromobacterium violaceum RepID=Q7P0M4_CHRVO Length = 633 Score = 486 bits (1252), Expect = e-136, Method: Composition-based stats. Identities = 55/357 (15%), Positives = 128/357 (35%), Gaps = 13/357 (3%) Query: 2 NTIKIKLNLIDYDSIVNIEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIKT-VSCQK 60 + L L +I P ++I +L + + + + E S SI + Sbjct: 279 GGDEFVLILP------SINQPGEAAQIAERILRTIQQPFQIGEHSLVVGCSIGISLMPDD 332 Query: 61 MKLYKKLNVKSDLTLWRDVFLRFK-AYLQPKNIICDNFNSSVLPVVSSKGESMAHYNIYY 119 + L + +DL ++ + + ++ + + Y Sbjct: 333 GSDIQTLLMNADLAMYHAKAHGRNTFRFYTREMNTQVAERLLMENRLRRAMEQEQLYLVY 392 Query: 120 QPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINKLFSP--- 176 QP Y+ + GC+ + ++ D I + + L + Sbjct: 393 QPQYDMAGQRLLGCEALLRWRDPDEGLIMP-GRFIPVAEDTGLIVPLGRWVLDQACRQAS 451 Query: 177 -IKNNLPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRY 235 + +N++ ++ D + ++ L L+ + + Sbjct: 452 LWLRAGLEPMRVAVNVSAHQLMRHDFIDDVREALQRHALPGHCLELEVTESTLMADADLA 511 Query: 236 QSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTI 295 L I+ V L+++DFG GY+ L++L+ V + ++ D+ + I + I Sbjct: 512 SRQLAVIKAMGVRLAIDDFGTGYSSLAYLKRFAPDLVKIDRSFISDLPGDEENAAIVSAI 571 Query: 296 IDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLLASLKQ 352 + L+ L ++ +A+G+E + Q ++ G + ++G L SPL + R+L ++ Sbjct: 572 VHLAGALGMETLAEGVENENQQRFLQTLGCEAMQGYLLGSPLAEEMMTRRLEQQQRR 628 >UniRef50_A8VRH4 Putative uncharacterized protein n=1 Tax=Bacillus selenitireducens MLS10 RepID=A8VRH4_9BACI Length = 815 Score = 486 bits (1252), Expect = e-136, Method: Composition-based stats. Identities = 61/350 (17%), Positives = 136/350 (38%), Gaps = 8/350 (2%) Query: 6 IKLNLIDYDSIVNIEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIKTVS-CQKMKLY 64 + ++ I P ++ ++ S + + ++ SI K Sbjct: 465 YRYGGDEFTIIHLDATPEESLQLGNKIASAISMAFDISGFDAFITVSIGISHHPDHGKDL 524 Query: 65 KKLNVKSDLTLWRDVFLRFKA-YLQPKNIICDNFNSSVLPVVSSKGESMAHYNIYYQPIY 123 L KSD ++ + + + I + + L + K + ++YQP Y Sbjct: 525 NTLIKKSDNAMYFAKKMGRNNVQMFNEEINTLSTKNLKLESLLYKALERDEFLLHYQPQY 584 Query: 124 NAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINKLFS----PIKN 179 +AK I+G + I N + + +D I + + + + ++ Sbjct: 585 DAKTNRISGVEALIRWDNEELGMISP-ADFIPLAEETGLIVPIGEWVMRTACHQNKAWQD 643 Query: 180 NLPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSL 239 +++N++ D+ + ++ G L L+ + ++ S L Sbjct: 644 EGLPPMVMSVNLSIRQFYQPDLPQVIGKILEESGMAPELLELEITESMAMH-ADSAISIL 702 Query: 240 RRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLS 299 ++++ V ++++DFG G++ L+HL+ P ++ + ++ DI S I TII L+ Sbjct: 703 KQLKQLGVRIAIDDFGTGFSSLNHLKKFPLDHLKIDRSFVDDICLGSEEQDIVKTIIMLA 762 Query: 300 KQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLLAS 349 L++ V+A+G+E Q ++ + +G S P+ DA L Sbjct: 763 HNLNLRVVAEGVENDLQQQFLKDHRCDVFQGFHFSKPVIRDAIPELLRKQ 812 >UniRef50_Q479L8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q479L8_DECAR Length = 582 Score = 486 bits (1252), Expect = e-136, Method: Composition-based stats. Identities = 57/361 (15%), Positives = 134/361 (37%), Gaps = 18/361 (4%) Query: 1 MNTIKIKLNLIDYDSIVNIEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIKT-VSCQ 59 + + + L + IE P + + ++ + Y + + + SI + Sbjct: 225 IGGDEFVIVLPE------IESPLTAARVANKVQQNMADSYRIADHALYATPSIGISLFPI 278 Query: 60 KMKLYKKLNVKSDLTLWRDVFLRFKAYLQPKNIICDNF-NSSVLPVVSSKGES-----MA 113 L +D ++ + + + + + S + Sbjct: 279 DGSDANTLLRNADTAMYHAKDAGRNNHQFYTARMNEAAGERLHMENELRQAISAISPGDS 338 Query: 114 HYNIYYQPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHI--- 170 +++++QP G + G + + N + I + L + Sbjct: 339 EFSLHFQPQVQTATGQVFGLEALLRWNNPIFGQVSP-MRFIAIAEETGLIQPLGDWVIWE 397 Query: 171 -NKLFSPIKNNLPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEEL 229 +L +K + I INI+ + + ++ + + + L+ + + Sbjct: 398 TCRLIRQMKQHGIEDIRIAINISAQQLRHENLLLLVRGALSCYDLRPEDIELEITESTAM 457 Query: 230 YIIRRYQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTD 289 S L ++ + L+++DFG GY+ L++L+++P + L ++ DIE ++ Sbjct: 458 QNPETTLSILDQLAAMGIVLAIDDFGTGYSSLAYLKHLPIQRLKLDRSFVKDIEIDANDA 517 Query: 290 IIATTIIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLLAS 349 I T I L L ++++A+G+ET+ Q ++ G L+G S P+P + + L A Sbjct: 518 AICTATIALGHSLGLELVAEGVETEAQRAFLASLGCDTLQGYLYSKPMPFEETIAYLKAH 577 Query: 350 L 350 Sbjct: 578 Q 578 >UniRef50_A6QAC3 Putative uncharacterized protein n=1 Tax=Sulfurovum sp. NBC37-1 RepID=A6QAC3_SULNB Length = 813 Score = 485 bits (1251), Expect = e-136, Method: Composition-based stats. Identities = 51/351 (14%), Positives = 131/351 (37%), Gaps = 13/351 (3%) Query: 1 MNTIKIKLNLIDYDSIVNIEFPCLLSEIEIELLSQLLKGYSVNEISKRRNRSIKTV-SCQ 59 + + + + ++ + +S + ++ L + + + + SI Q Sbjct: 465 LGGDEFTIIMENFKDV------QQVSVLAQKIQKVLNQPMHIEGHTLYISCSIGISFYPQ 518 Query: 60 KMKLYKKLNVKSDLTLWRDVFLRFK-AYLQPKNIICDNFNSSVLPVVSSKGESMAHYNIY 118 + L +D +++ + + V+ + + +Y Sbjct: 519 DTQNANDLVKYADAAMYKAKEEGRNNFQFYSTEMTTLAYERVVMEASLRQAIKNEEFILY 578 Query: 119 YQPIYNAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINK----LF 174 YQP NA+ + G + I ++ D I + + + + Sbjct: 579 YQPQVNAQTSRMTGMEALIRWEHPHLGMILPD-KFIPLAEESGLILEIDRWVMRTAMKQV 637 Query: 175 SPIKNNLPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRR 234 +++N++ + + ++ + E L + + + + Sbjct: 638 REWYARGLDPGVLSLNLSMRQLKDENFIDVIKEYLHMMSFEPEWLEFEVTEGQMMKRPDD 697 Query: 235 YQSSLRRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIESNSLTDIIATT 294 +SL I++ + ++++DFG GY+ L +L+ +P S + + ++ H I + I Sbjct: 698 AVASLGEIKSMGISIAIDDFGTGYSSLGYLKRLPVSRLKIDQSFIHGIPEDRENAAIVKA 757 Query: 295 IIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRK 345 I L+K L + +IA+G+E ++Q +++ G ++G P+ AD +K Sbjct: 758 TIALAKSLSLSIIAEGVENEEQKEFLLFNGCISMQGYYYGRPMTADQIEKK 808 >UniRef50_Q89WT2 Bll0596 protein n=1 Tax=Bradyrhizobium japonicum RepID=Q89WT2_BRAJA Length = 833 Score = 485 bits (1251), Expect = e-136, Method: Composition-based stats. Identities = 60/344 (17%), Positives = 131/344 (38%), Gaps = 5/344 (1%) Query: 7 KLNLIDYDSIVNIEFPC-LLSEIEIELLSQLLKGYSVNEISKRRNRSIKT-VSCQKMKLY 64 +L ++ I + P + + + L + + + + SI ++ + Sbjct: 480 RLGGDEFAVIDYVTNPAVEAAALAENIRKALCEPFDLGDHRVTVGTSIGIAIAPRDGNDS 539 Query: 65 KKLNVKSDLTLWRDVFLRFKAYLQPKNIICDNFN-SSVLPVVSSKGESMAHYNIYYQPIY 123 + +DL L+ A+ + + + + L + ++YQP Sbjct: 540 DVIMKSADLALYSAKSGGRGAFRFFEPELDELMHARRNLERDMRDAIVGRQFELHYQPFV 599 Query: 124 NAKNGNIAGCDVTIALKNSDGSAFALDSDRINYNPNDNKVSYLFGHINKLFSPIKNNLPH 183 + G + G + + + S+ I + L + + P Sbjct: 600 SPATGKVNGFEALLRWHHPQQGLVMP-SEFIPLAEETGLIVPLGEWVLRAACAEAAKWPP 658 Query: 184 GFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSLRRIR 243 I +N++P + ++ + + G RL L+ + ++ + L ++R Sbjct: 659 HVRIAVNLSPAQFRSKELVPVVIGALASSGVAPHRLELEVTETVIMHDSEAVFAVLGQLR 718 Query: 244 NNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHKTMFHDIES-NSLTDIIATTIIDLSKQL 302 V ++L+DFG GY+ LS LQ PF + + ++ +++ S + +A ++ + L Sbjct: 719 ELGVRIALDDFGTGYSSLSFLQKFPFDKIKIDRSFVNELSSARAEARHLARAVVRFAVSL 778 Query: 303 HIDVIADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKL 346 A+G+ETK+Q + E G +G S P+PA R L Sbjct: 779 GKTTTAEGVETKEQLDILCEEGCLETQGYYFSRPMPASDIARML 822 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.316 0.211 0.820 Lambda K H 0.267 0.0647 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 2,955,773,535 Number of Sequences: 3077464 Number of extensions: 197736918 Number of successful extensions: 465885 Number of sequences better than 1.0e-01: 250 Number of HSP's better than 0.1 without gapping: 12897 Number of HSP's successfully gapped in prelim test: 3456 Number of HSP's that attempted gapping in prelim test: 420815 Number of HSP's gapped (non-prelim): 19425 length of query: 353 length of database: 1,040,396,356 effective HSP length: 130 effective length of query: 223 effective length of database: 640,326,036 effective search space: 142792706028 effective search space used: 142792706028 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (20.9 bits) S2: 95 (40.5 bits)