 |
| Job Description | P0AE98 | | Confidence | 3.21% | Date | Thu Jan 5 11:22:50 GMT 2012 |
| Rank | 75 | Aligned Residues | 31 |
| % Identity | 26% | Template | c3ohnA_ |
| PDB info |
PDB header:membrane protein | Chain: A: PDB Molecule:outer membrane usher protein fimd; |
PDBTitle: crystal structure of the fimd translocation domain
|
| Resolution | 3.01 Å |
|
|   |   |
98 | . | 100 | . | . | . | |
|
|
. | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . |
| Predicted Secondary structure |   |
|
|  |  |  |  | . | . | . |  |  |  |
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
| Query SS confidence |   |
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
N | D | Y | I | V | D | . |
. |
. |
I | A | N | R | D | G | Q | L | Q | L | N | V | T | D | R | K | T | G | Q | T | S | T | I | Q | V | S |
| Query Conservation |   |
|
|   |   |
|   | . | . | . |
|   |   |   |   |
|   |
|   |
|   |
|
|
|   |   |
|
|
|   |
|   |
|   |
|   |
| Alig confidence |   |
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation |   |
|   |
|   |
|   |   |   |   |   |   |   |
|   |   |   |   |   |
|   |
|   |   | . |   |   |
|   |   |   |   |   |   |   |   |
| Template Sequence |   |
G | P | F | T | I | N | D | I | Y | A | A | G | N | S | G | D | L | Q | V | T | I | K | E | . |
A | D | G | S | T | Q | I | F | T | V | P |
| Template Known Secondary structure |   |
 |  |  |  |
|
|
|
|
|
| T | T | T | T | S |
|  |  |  |  |  |  |  | . | S | S | S |
|  |  |  |  |  |  |
|
| Template Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  | . |
|
|
|
|  |  |  |  |  |  |  |
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
283 | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | |
. | . | . | . | 310 | . | . | . | . | . | . |
|   |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
|   |
|
|
|