Phyre 2 Results for P36938

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Email | l.a.kelley@imperial.ac.uk
Description | P36938
Date | Thu Jan 5 11:54:03 GMT 2012
Unique Job ID | 6f1d53f509f8b040

Summary |

Top model
Image coloured by rainbow N → C terminus
| Close Jmol

Model (left) based on template c2fuvB_
Top template information
PDB header:isomerase Chain: B: PDB Molecule:phosphoglucomutase; PDBTitle: phosphoglucomutase from salmonella typhimurium.
Confidence and coverage
Confidence: | 100.0% | Coverage: | 100%
545 residues (100% of your sequence) have been modelled with 100.0% confidence by the single highest scoring template.
3D viewing
Interactive 3D view in Jmol

Sequence analysis |

Secondary structure and disorder prediction |

|  | 1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60
Sequence |  | M | A | I | H | N | R | A | G | Q | P | A | Q | Q | S | D | L | I | N | V | A | Q | L | T | A | Q | Y | Y | V | L | K | P | E | A | G | N | A | E | H | A | V | K | F | G | T | S | G | H | R | G | S | A | A | R | H | S | F | N | E | P | H
Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder |  | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? |  |  |  | ? |  | ? |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | ? | ? | ? | ? | ? |  |  | ? | ? |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120
Sequence |  | I | L | A | I | A | Q | A | I | A | E | E | R | A | K | N | G | I | T | G | P | C | Y | V | G | K | D | T | H | A | L | S | E | P | A | F | I | S | V | L | E | V | L | A | A | N | G | V | D | V | I | V | Q | E | N | N | G | F | T | P | T
Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180
Sequence |  | P | A | V | S | N | A | I | L | V | H | N | K | K | G | G | P | L | A | D | G | I | V | I | T | P | S | H | N | P | P | E | D | G | G | I | K | Y | N | P | P | N | G | G | P | A | D | T | N | V | T | K | V | V | E | D | R | A | N | A | L
Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240
Sequence |  | L | A | D | G | L | K | G | V | K | R | I | S | L | D | E | A | M | A | S | G | H | V | K | E | Q | D | L | V | Q | P | F | V | E | G | L | A | D | I | V | D | M | A | A | I | Q | K | A | G | L | T | L | G | V | D | P | L | G | G | S | G
Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder |  |  |  | ? |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | ? | ? | ? |  | ? |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300
Sequence |  | I | E | Y | W | K | R | I | G | E | Y | Y | N | L | N | L | T | I | V | N | D | Q | V | D | Q | T | F | R | F | M | H | L | D | K | D | G | A | I | R | M | D | C | S | S | E | C | A | M | A | G | L | L | A | L | R | D | K | F | D | L | A
Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | ? |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360
Sequence |  | F | A | N | D | P | D | Y | D | R | H | G | I | V | T | P | A | G | L | M | N | P | N | H | Y | L | A | V | A | I | N | Y | L | F | Q | H | R | P | Q | W | G | K | D | V | A | V | G | K | T | L | V | S | S | A | M | I | D | R | V | V | N
Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | ? |  | ? | ? |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | . | . | . | . | . | . | . | . | . | 370 | . | . | . | . | . | . | . | . | . | 380 | . | . | . | . | . | . | . | . | . | 390 | . | . | . | . | . | . | . | . | . | 400 | . | . | . | . | . | . | . | . | . | 410 | . | . | . | . | . | . | . | . | . | 420
Sequence |  | D | L | G | R | K | L | V | E | V | P | V | G | F | K | W | F | V | D | G | L | F | D | G | S | F | G | F | G | G | E | E | S | A | G | A | S | F | L | R | F | D | G | T | P | W | S | T | D | K | D | G | I | I | M | C | L | L | A | A | E
Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | . | . | . | . | . | . | . | . | . | 430 | . | . | . | . | . | . | . | . | . | 440 | . | . | . | . | . | . | . | . | . | 450 | . | . | . | . | . | . | . | . | . | 460 | . | . | . | . | . | . | . | . | . | 470 | . | . | . | . | . | . | . | . | . | 480
Sequence |  | I | T | A | V | T | G | K | N | P | Q | E | H | Y | N | E | L | A | K | R | F | G | A | P | S | Y | N | R | L | Q | A | A | A | T | S | A | Q | K | A | A | L | S | K | L | S | P | E | M | V | S | A | S | T | L | A | G | D | P | I | T | A
Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | ? | ? | ? | ? | ? |  |  |  |  |  |  |  |  |  |
Disorder confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | . | . | . | . | . | . | . | . | . | 490 | . | . | . | . | . | . | . | . | . | 500 | . | . | . | . | . | . | . | . | . | 510 | . | . | . | . | . | . | . | . | . | 520 | . | . | . | . | . | . | . | . | . | 530 | . | . | . | . | . | . | . | . | . | 540
Sequence |  | R | L | T | A | A | P | G | N | G | A | S | I | G | G | L | K | V | M | T | D | N | G | W | F | A | A | R | P | S | G | T | E | D | A | Y | K | I | Y | C | E | S | F | L | G | E | E | H | R | K | Q | I | E | K | E | A | V | E | I | V | S
Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder |  |  |  |  |  | ? | ? | ? |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | . | . | . | . | . | .
Sequence |  | E | V | L | K | N | A
Secondary structure |  |  |  |  |  |  |
SS confidence |  |  |  |  |  |  |
Disorder |  |  |  |  |  | ? | ?
Disorder confidence |  |  |  |  |  |  |

Confidence Key
High(9) |  |  |  |  |  |  |  |  |  |  | Low (0)

? | Disordered
| Alpha helix
| Beta strand

Domain analysis |

Hover over an aligned region to see model and summary info

Please note, only up to the top 20 hits are modelled to reduce computer load

Rank | Aligned region
--- | ---
1 |
| c2fuvB_ |

### PDB 2fuv chain B

Region: 2 - 546
Aligned: 545
Modelled: 544
Confidence: 100.0%
Identity: 96%
PDB header:isomerase
Chain: B: PDB Molecule:phosphoglucomutase;
PDBTitle: phosphoglucomutase from salmonella typhimurium.

Phyre2
2 |
| c2z0fA_ |

### PDB 2z0f chain A

Region: 17 - 543
Aligned: 490
Modelled: 496
Confidence: 100.0%
Identity: 54%
PDB header:isomerase
Chain: A: PDB Molecule:putative phosphoglucomutase;
PDBTitle: crystal structure of putative phosphoglucomutase from thermus2 thermophilus hb8

Phyre2
3 |
| c1kfiA_ |

### PDB 1kfi chain A

Region: 33 - 544
Aligned: 502
Modelled: 506
Confidence: 100.0%
Identity: 22%
PDB header:isomerase
Chain: A: PDB Molecule:phosphoglucomutase 1;
PDBTitle: crystal structure of the exocytosis-sensitive2 phosphoprotein, pp63/parafusin (phosphoglucomutase) from3 paramecium

Phyre2
4 |
| c1c4gB_ |

### PDB 1c4g chain B

Region: 27 - 544
Aligned: 500
Modelled: 500
Confidence: 100.0%
Identity: 26%
PDB header:transferase
Chain: B: PDB Molecule:protein (alpha-d-glucose 1-phosphate
PDBTitle: phosphoglucomutase vanadate based transition state analog2 complex

Phyre2
5 |
| c1wqaB_ |

### PDB 1wqa chain B

Region: 42 - 543
Aligned: 448
Modelled: 479
Confidence: 100.0%
Identity: 27%
PDB header:isomerase
Chain: B: PDB Molecule:phospho-sugar mutase;
PDBTitle: crystal structure of pyrococcus horikoshii2 phosphomannomutase/phosphoglucomutase complexed with mg2+

Phyre2
6 |
| c2f7lA_ |

### PDB 2f7l chain A

Region: 38 - 540
Aligned: 450
Modelled: 484
Confidence: 100.0%
Identity: 23%
PDB header:isomerase
Chain: A: PDB Molecule:455aa long hypothetical phospho-sugar mutase;
PDBTitle: crystal structure of sulfolobus tokodaii2 phosphomannomutase/phosphoglucomutase

Phyre2
7 |
| c3c04A_ |

### PDB 3c04 chain A

Region: 42 - 546
Aligned: 444
Modelled: 449
Confidence: 100.0%
Identity: 22%
PDB header:isomerase
Chain: A: PDB Molecule:phosphomannomutase/phosphoglucomutase;
PDBTitle: structure of the p368g mutant of pmm/pgm from p. aeruginosa

Phyre2
8 |
| c3pdkB_ |

### PDB 3pdk chain B

Region: 42 - 543
Aligned: 439
Modelled: 478
Confidence: 100.0%
Identity: 20%
PDB header:isomerase
Chain: B: PDB Molecule:phosphoglucosamine mutase;
PDBTitle: crystal structure of phosphoglucosamine mutase from b. anthracis

Phyre2
9 |
| c1tuoA_ |

### PDB 1tuo chain A

Region: 36 - 540
Aligned: 432
Modelled: 458
Confidence: 100.0%
Identity: 29%
PDB header:biosynthetic protein
Chain: A: PDB Molecule:putative phosphomannomutase;
PDBTitle: crystal structure of putative phosphomannomutase from2 thermus thermophilus hb8

Phyre2
10 |
| c3i3wB_ |

### PDB 3i3w chain B

Region: 42 - 543
Aligned: 436
Modelled: 475
Confidence: 100.0%
Identity: 22%
PDB header:isomerase
Chain: B: PDB Molecule:phosphoglucosamine mutase;
PDBTitle: structure of a phosphoglucosamine mutase from francisella tularensis

Phyre2
11 |
| c2dkdA_ |

### PDB 2dkd chain A

Region: 64 - 540
Aligned: 428
Modelled: 443
Confidence: 100.0%
Identity: 20%
PDB header:isomerase
Chain: A: PDB Molecule:phosphoacetylglucosamine mutase;
PDBTitle: crystal structure of n-acetylglucosamine-phosphate mutase,2 a member of the alpha-d-phosphohexomutase superfamily, in3 the product complex

Phyre2
12 |
| d1kfia1 |

### PDB 1kfi chain A domain 1

Region: 32 - 235
Aligned: 188
Modelled: 189
Confidence: 100.0%
Identity: 24%
Fold: Phosphoglucomutase, first 3 domains
Superfamily: Phosphoglucomutase, first 3 domains
Family: Phosphoglucomutase, first 3 domains

Phyre2
13 |
| d3pmga1 |

### PDB 3pmg chain A domain 1

Region: 33 - 221
Aligned: 179
Modelled: 189
Confidence: 100.0%
Identity: 30%
Fold: Phosphoglucomutase, first 3 domains
Superfamily: Phosphoglucomutase, first 3 domains
Family: Phosphoglucomutase, first 3 domains

Phyre2
14 |
| d1p5dx1 |

### PDB 1p5d chain X domain 1

Region: 42 - 192
Aligned: 140
Modelled: 151
Confidence: 100.0%
Identity: 25%
Fold: Phosphoglucomutase, first 3 domains
Superfamily: Phosphoglucomutase, first 3 domains
Family: Phosphoglucomutase, first 3 domains

Phyre2
15 |
| d3pmga3 |

### PDB 3pmg chain A domain 3

Region: 321 - 441
Aligned: 115
Modelled: 121
Confidence: 99.9%
Identity: 23%
Fold: Phosphoglucomutase, first 3 domains
Superfamily: Phosphoglucomutase, first 3 domains
Family: Phosphoglucomutase, first 3 domains

Phyre2
16 |
| d1kfia3 |

### PDB 1kfi chain A domain 3

Region: 306 - 441
Aligned: 112
Modelled: 112
Confidence: 99.9%
Identity: 29%
Fold: Phosphoglucomutase, first 3 domains
Superfamily: Phosphoglucomutase, first 3 domains
Family: Phosphoglucomutase, first 3 domains

Phyre2
17 |
| d1p5dx3 |

### PDB 1p5d chain X domain 3

Region: 321 - 435
Aligned: 107
Modelled: 115
Confidence: 99.9%
Identity: 17%
Fold: Phosphoglucomutase, first 3 domains
Superfamily: Phosphoglucomutase, first 3 domains
Family: Phosphoglucomutase, first 3 domains

Phyre2
18 |
| d1p5dx2 |

### PDB 1p5d chain X domain 2

Region: 207 - 319
Aligned: 103
Modelled: 113
Confidence: 99.9%
Identity: 22%
Fold: Phosphoglucomutase, first 3 domains
Superfamily: Phosphoglucomutase, first 3 domains
Family: Phosphoglucomutase, first 3 domains

Phyre2
19 |
| d1kfia2 |

### PDB 1kfi chain A domain 2

Region: 208 - 319
Aligned: 112
Modelled: 112
Confidence: 99.9%
Identity: 17%
Fold: Phosphoglucomutase, first 3 domains
Superfamily: Phosphoglucomutase, first 3 domains
Family: Phosphoglucomutase, first 3 domains

Phyre2
20 |
| d3pmga2 |

### PDB 3pmg chain A domain 2

Region: 208 - 320
Aligned: 106
Modelled: 113
Confidence: 99.8%
Identity: 25%
Fold: Phosphoglucomutase, first 3 domains
Superfamily: Phosphoglucomutase, first 3 domains
Family: Phosphoglucomutase, first 3 domains

Phyre2
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Detailed template information |

# | Template | Alignment Coverage | 3D Model | Confidence | % i.d. | Template Information
--- | --- | --- | --- | --- | --- | ---
1 | c2fuvB_ |
|  | 100.0 | 96 | PDB header:isomerase Chain: B: PDB Molecule:phosphoglucomutase; PDBTitle: phosphoglucomutase from salmonella typhimurium.
2 | c2z0fA_ |
|  | 100.0 | 54 | PDB header:isomerase Chain: A: PDB Molecule:putative phosphoglucomutase; PDBTitle: crystal structure of putative phosphoglucomutase from thermus2 thermophilus hb8
3 | c1kfiA_ |
|  | 100.0 | 22 | PDB header:isomerase Chain: A: PDB Molecule:phosphoglucomutase 1; PDBTitle: crystal structure of the exocytosis-sensitive2 phosphoprotein, pp63/parafusin (phosphoglucomutase) from3 paramecium
4 | c1c4gB_ |
|  | 100.0 | 26 | PDB header:transferase Chain: B: PDB Molecule:protein (alpha-d-glucose 1-phosphate PDBTitle: phosphoglucomutase vanadate based transition state analog2 complex
5 | c1wqaB_ |
|  | 100.0 | 27 | PDB header:isomerase Chain: B: PDB Molecule:phospho-sugar mutase; PDBTitle: crystal structure of pyrococcus horikoshii2 phosphomannomutase/phosphoglucomutase complexed with mg2+
6 | c2f7lA_ |
|  | 100.0 | 23 | PDB header:isomerase Chain: A: PDB Molecule:455aa long hypothetical phospho-sugar mutase; PDBTitle: crystal structure of sulfolobus tokodaii2 phosphomannomutase/phosphoglucomutase
7 | c3c04A_ |
|  | 100.0 | 22 | PDB header:isomerase Chain: A: PDB Molecule:phosphomannomutase/phosphoglucomutase; PDBTitle: structure of the p368g mutant of pmm/pgm from p. aeruginosa
8 | c3pdkB_ |
|  | 100.0 | 20 | PDB header:isomerase Chain: B: PDB Molecule:phosphoglucosamine mutase; PDBTitle: crystal structure of phosphoglucosamine mutase from b. anthracis
9 | c1tuoA_ |
|  | 100.0 | 29 | PDB header:biosynthetic protein Chain: A: PDB Molecule:putative phosphomannomutase; PDBTitle: crystal structure of putative phosphomannomutase from2 thermus thermophilus hb8
10 | c3i3wB_ |
|  | 100.0 | 22 | PDB header:isomerase Chain: B: PDB Molecule:phosphoglucosamine mutase; PDBTitle: structure of a phosphoglucosamine mutase from francisella tularensis
11 | c2dkdA_ |
|  | 100.0 | 20 | PDB header:isomerase Chain: A: PDB Molecule:phosphoacetylglucosamine mutase; PDBTitle: crystal structure of n-acetylglucosamine-phosphate mutase,2 a member of the alpha-d-phosphohexomutase superfamily, in3 the product complex
12 | d1kfia1 |
|  | 100.0 | 24 | Fold:Phosphoglucomutase, first 3 domains Superfamily:Phosphoglucomutase, first 3 domains Family:Phosphoglucomutase, first 3 domains
13 | d3pmga1 |
|  | 100.0 | 30 | Fold:Phosphoglucomutase, first 3 domains Superfamily:Phosphoglucomutase, first 3 domains Family:Phosphoglucomutase, first 3 domains
14 | d1p5dx1 |
|  | 100.0 | 25 | Fold:Phosphoglucomutase, first 3 domains Superfamily:Phosphoglucomutase, first 3 domains Family:Phosphoglucomutase, first 3 domains
15 | d3pmga3 |
|  | 99.9 | 23 | Fold:Phosphoglucomutase, first 3 domains Superfamily:Phosphoglucomutase, first 3 domains Family:Phosphoglucomutase, first 3 domains
16 | d1kfia3 |
|  | 99.9 | 29 | Fold:Phosphoglucomutase, first 3 domains Superfamily:Phosphoglucomutase, first 3 domains Family:Phosphoglucomutase, first 3 domains
17 | d1p5dx3 |
|  | 99.9 | 17 | Fold:Phosphoglucomutase, first 3 domains Superfamily:Phosphoglucomutase, first 3 domains Family:Phosphoglucomutase, first 3 domains
18 | d1p5dx2 |
|  | 99.9 | 22 | Fold:Phosphoglucomutase, first 3 domains Superfamily:Phosphoglucomutase, first 3 domains Family:Phosphoglucomutase, first 3 domains
19 | d1kfia2 |
|  | 99.9 | 17 | Fold:Phosphoglucomutase, first 3 domains Superfamily:Phosphoglucomutase, first 3 domains Family:Phosphoglucomutase, first 3 domains
20 | d3pmga2 |
|  | 99.8 | 25 | Fold:Phosphoglucomutase, first 3 domains Superfamily:Phosphoglucomutase, first 3 domains Family:Phosphoglucomutase, first 3 domains
21 | d1p5dx4 |
| not modelled | 99.8 | 20 | Fold:TBP-like Superfamily:Phosphoglucomutase, C-terminal domain Family:Phosphoglucomutase, C-terminal domain
22 | d1wjwa_ |
| not modelled | 99.3 | 21 | Fold:TBP-like Superfamily:Phosphoglucomutase, C-terminal domain Family:Phosphoglucomutase, C-terminal domain
23 | d3pmga4 |
| not modelled | 98.1 | 17 | Fold:TBP-like Superfamily:Phosphoglucomutase, C-terminal domain Family:Phosphoglucomutase, C-terminal domain
24 | d1kfia4 |
| not modelled | 97.9 | 17 | Fold:TBP-like Superfamily:Phosphoglucomutase, C-terminal domain Family:Phosphoglucomutase, C-terminal domain
25 | c3s5pA_ |
| not modelled | 84.0 | 17 | PDB header:isomerase Chain: A: PDB Molecule:ribose 5-phosphate isomerase; PDBTitle: crystal structure of ribose-5-phosphate isomerase b rpib from giardia2 lamblia
26 | c3qayC_ |
| not modelled | 82.3 | 10 | PDB header:lyase Chain: C: PDB Molecule:endolysin; PDBTitle: catalytic domain of cd27l endolysin targeting clostridia difficile
27 | c3he8A_ |
| not modelled | 80.1 | 25 | PDB header:isomerase Chain: A: PDB Molecule:ribose-5-phosphate isomerase; PDBTitle: structural study of clostridium thermocellum ribose-5-phosphate2 isomerase b
28 | d1nn4a_ |
| not modelled | 80.0 | 22 | Fold:Ribose/Galactose isomerase RpiB/AlsB Superfamily:Ribose/Galactose isomerase RpiB/AlsB Family:Ribose/Galactose isomerase RpiB/AlsB
29 | d2vvpa1 |
| not modelled | 79.7 | 28 | Fold:Ribose/Galactose isomerase RpiB/AlsB Superfamily:Ribose/Galactose isomerase RpiB/AlsB Family:Ribose/Galactose isomerase RpiB/AlsB
30 | c2ppwA_ |
| not modelled | 78.8 | 13 | PDB header:isomerase Chain: A: PDB Molecule:conserved domain protein; PDBTitle: the crystal structure of uncharacterized ribose 5-phosphate isomerase2 rpib from streptococcus pneumoniae
31 | c3c5yD_ |
| not modelled | 76.0 | 16 | PDB header:isomerase Chain: D: PDB Molecule:ribose/galactose isomerase; PDBTitle: crystal structure of a putative ribose 5-phosphate isomerase2 (saro_3514) from novosphingobium aromaticivorans dsm at 1.81 a3 resolution
32 | d3bula2 |
| not modelled | 73.9 | 19 | Fold:Flavodoxin-like Superfamily:Cobalamin (vitamin B12)-binding domain Family:Cobalamin (vitamin B12)-binding domain
33 | c3ne8A_ |
| not modelled | 73.6 | 25 | PDB header:hydrolase Chain: A: PDB Molecule:n-acetylmuramoyl-l-alanine amidase; PDBTitle: the crystal structure of a domain from n-acetylmuramoyl-l-alanine2 amidase of bartonella henselae str. houston-1
34 | c3k7pA_ |
| not modelled | 70.0 | 12 | PDB header:isomerase Chain: A: PDB Molecule:ribose 5-phosphate isomerase; PDBTitle: structure of mutant of ribose 5-phosphate isomerase type b from2 trypanosoma cruzi.
35 | c3m1pA_ |
| not modelled | 70.0 | 12 | PDB header:isomerase Chain: A: PDB Molecule:ribose 5-phosphate isomerase; PDBTitle: structure of ribose 5-phosphate isomerase type b from trypanosoma2 cruzi, soaked with allose-6-phosphate
36 | c1k98A_ |
| not modelled | 65.6 | 19 | PDB header:transferase Chain: A: PDB Molecule:methionine synthase; PDBTitle: adomet complex of meth c-terminal fragment
37 | d1o1xa_ |
| not modelled | 59.5 | 18 | Fold:Ribose/Galactose isomerase RpiB/AlsB Superfamily:Ribose/Galactose isomerase RpiB/AlsB Family:Ribose/Galactose isomerase RpiB/AlsB
38 | c3k6qB_ |
| not modelled | 53.1 | 9 | PDB header:ligand binding protein Chain: B: PDB Molecule:putative ligand binding protein; PDBTitle: crystal structure of an antitoxin part of a putative toxin/antitoxin2 system (swol_0700) from syntrophomonas wolfei subsp. wolfei at 1.80 a3 resolution
39 | d1e5da1 |
| not modelled | 49.0 | 14 | Fold:Flavodoxin-like Superfamily:Flavoproteins Family:Flavodoxin-related
40 | d2bl5a1 |
| not modelled | 44.9 | 24 | Fold:Eukaryotic type KH-domain (KH-domain type I) Superfamily:Eukaryotic type KH-domain (KH-domain type I) Family:Eukaryotic type KH-domain (KH-domain type I)
41 | c3onoA_ |
| not modelled | 44.3 | 10 | PDB header:isomerase Chain: A: PDB Molecule:ribose/galactose isomerase; PDBTitle: crystal structure of ribose-5-phosphate isomerase lacab_rpib from2 vibrio parahaemolyticus
42 | c2q9uB_ |
| not modelled | 44.2 | 10 | PDB header:oxidoreductase Chain: B: PDB Molecule:a-type flavoprotein; PDBTitle: crystal structure of the flavodiiron protein from giardia2 intestinalis
43 | d1x74a1 |
| not modelled | 42.1 | 10 | Fold:CoA-transferase family III (CaiB/BaiF) Superfamily:CoA-transferase family III (CaiB/BaiF) Family:CoA-transferase family III (CaiB/BaiF)
44 | d1ccwa_ |
| not modelled | 42.0 | 16 | Fold:Flavodoxin-like Superfamily:Cobalamin (vitamin B12)-binding domain Family:Cobalamin (vitamin B12)-binding domain
45 | c3op1A_ |
| not modelled | 41.6 | 15 | PDB header:transferase Chain: A: PDB Molecule:macrolide-efflux protein; PDBTitle: crystal structure of macrolide-efflux protein sp_1110 from2 streptococcus pneumoniae
46 | c2zkiH_ |
| not modelled | 41.2 | 12 | PDB header:transcription Chain: H: PDB Molecule:199aa long hypothetical trp repressor binding PDBTitle: crystal structure of hypothetical trp repressor binding2 protein from sul folobus tokodaii (st0872)
47 | d1gvfa_ |
| not modelled | 40.8 | 14 | Fold:TIM beta/alpha-barrel Superfamily:Aldolase Family:Class II FBP aldolase
48 | c3nvtA_ |
| not modelled | 40.4 | 14 | PDB header:transferase/isomerase Chain: A: PDB Molecule:3-deoxy-d-arabino-heptulosonate 7-phosphate synthase; PDBTitle: 1.95 angstrom crystal structure of a bifunctional 3-deoxy-7-2 phosphoheptulonate synthase/chorismate mutase (aroa) from listeria3 monocytogenes egd-e
49 | c2i2xD_ |
| not modelled | 38.1 | 19 | PDB header:transferase Chain: D: PDB Molecule:methyltransferase 1; PDBTitle: crystal structure of methanol:cobalamin methyltransferase complex2 mtabc from methanosarcina barkeri
50 | c3a9rA_ |
| not modelled | 37.0 | 21 | PDB header:isomerase Chain: A: PDB Molecule:d-arabinose isomerase; PDBTitle: x-ray structures of bacillus pallidus d-arabinose2 isomerasecomplex with (4r)-2-methylpentane-2,4-diol
51 | c3pm6B_ |
| not modelled | 36.9 | 19 | PDB header:lyase Chain: B: PDB Molecule:putative fructose-bisphosphate aldolase; PDBTitle: crystal structure of a putative fructose-1,6-biphosphate aldolase from2 coccidioides immitis solved by combined sad mr
52 | d1yt8a4 |
| not modelled | 34.6 | 8 | Fold:Rhodanese/Cell cycle control phosphatase Superfamily:Rhodanese/Cell cycle control phosphatase Family:Multidomain sulfurtransferase (rhodanese)
53 | c1bmtB_ |
| not modelled | 33.9 | 18 | PDB header:methyltransferase Chain: B: PDB Molecule:methionine synthase; PDBTitle: how a protein binds b12: a 3.o angstrom x-ray structure of2 the b12-binding domains of methionine synthase
54 | c2ql5A_ |
| not modelled | 33.6 | 15 | PDB header:hydrolase/hydrolase inhibitor Chain: A: PDB Molecule:caspase-7; PDBTitle: crystal structure of caspase-7 with inhibitor ac-dmqd-cho
55 | d1t6t1_ |
| not modelled | 33.5 | 19 | Fold:Toprim domain Superfamily:Toprim domain Family:Toprim domain
56 | c3qd5B_ |
| not modelled | 33.1 | 20 | PDB header:isomerase Chain: B: PDB Molecule:putative ribose-5-phosphate isomerase; PDBTitle: crystal structure of a putative ribose-5-phosphate isomerase from2 coccidioides immitis solved by combined iodide ion sad and mr
57 | c1y80A_ |
| not modelled | 32.6 | 18 | PDB header:structural genomics, unknown function Chain: A: PDB Molecule:predicted cobalamin binding protein; PDBTitle: structure of a corrinoid (factor iiim)-binding protein from2 moorella thermoacetica
58 | c2plqA_ |
| not modelled | 32.2 | 14 | PDB header:hydrolase Chain: A: PDB Molecule:aliphatic amidase; PDBTitle: crystal structure of the amidase from geobacillus pallidus rapc8
59 | c2iswB_ |
| not modelled | 32.2 | 16 | PDB header:lyase Chain: B: PDB Molecule:putative fructose-1,6-bisphosphate aldolase; PDBTitle: structure of giardia fructose-1,6-biphosphate aldolase in2 complex with phosphoglycolohydroxamate
60 | d1b0aa2 |
| not modelled | 30.7 | 18 | Fold:Aminoacid dehydrogenase-like, N-terminal domain Superfamily:Aminoacid dehydrogenase-like, N-terminal domain Family:Tetrahydrofolate dehydrogenase/cyclohydrolase
61 | d1ykga1 |
| not modelled | 30.0 | 16 | Fold:Flavodoxin-like Superfamily:Flavoproteins Family:Cytochrome p450 reductase N-terminal domain-like
62 | d3eeqa2 |
| not modelled | 29.8 | 12 | Fold:CbiG N-terminal domain-like Superfamily:CbiG N-terminal domain-like Family:CbiG N-terminal domain-like
63 | c1pyoA_ |
| not modelled | 29.8 | 12 | PDB header:hydrolase/hydrolase inhibitor Chain: A: PDB Molecule:caspase-2; PDBTitle: crystal structure of human caspase-2 in complex with acetyl-leu-asp-2 glu-ser-asp-cho
64 | d1jwqa_ |
| not modelled | 27.9 | 15 | Fold:Phosphorylase/hydrolase-like Superfamily:Zn-dependent exopeptidases Family:N-acetylmuramoyl-L-alanine amidase-like
65 | d1a4ia2 |
| not modelled | 26.9 | 15 | Fold:Aminoacid dehydrogenase-like, N-terminal domain Superfamily:Aminoacid dehydrogenase-like, N-terminal domain Family:Tetrahydrofolate dehydrogenase/cyclohydrolase
66 | d7reqa2 |
| not modelled | 26.8 | 10 | Fold:Flavodoxin-like Superfamily:Cobalamin (vitamin B12)-binding domain Family:Cobalamin (vitamin B12)-binding domain
67 | d1vmea1 |
| not modelled | 25.6 | 16 | Fold:Flavodoxin-like Superfamily:Flavoproteins Family:Flavodoxin-related
68 | c3qqzA_ |
| not modelled | 25.4 | 21 | PDB header:metal binding protein Chain: A: PDB Molecule:putative uncharacterized protein yjik; PDBTitle: crystal structure of the c-terminal domain of the yjik protein from2 escherichia coli cft073
69 | c1pyaD_ |
| not modelled | 25.2 | 19 | PDB header:carboxy-lyase Chain: D: PDB Molecule:pyruvoyl-dependent histidine decarboxylase (l- PDBTitle: refined structure of the pyruvoyl-dependent histidine2 decarboxylase from lactobacillus 30a
70 | c3hlyA_ |
| not modelled | 25.0 | 16 | PDB header:flavoprotein Chain: A: PDB Molecule:flavodoxin-like domain; PDBTitle: crystal structure of the flavodoxin-like domain from2 synechococcus sp q5mzp6_synp6 protein. northeast structural3 genomics consortium target snr135d.
71 | c3sz8D_ |
| not modelled | 24.1 | 11 | PDB header:transferase Chain: D: PDB Molecule:2-dehydro-3-deoxyphosphooctonate aldolase 2; PDBTitle: crystal structure of 2-dehydro-3-deoxyphosphooctonate aldolase from2 burkholderia pseudomallei
72 | c1i51A_ |
| not modelled | 23.5 | 15 | PDB header:hydrolase/hydrolase inhibitor Chain: A: PDB Molecule:caspase-7 subunit p20; PDBTitle: crystal structure of caspase-7 complexed with xiap
73 | d1jf8a_ |
| not modelled | 23.5 | 14 | Fold:Phosphotyrosine protein phosphatases I-like Superfamily:Phosphotyrosine protein phosphatases I Family:Low-molecular-weight phosphotyrosine protein phosphatases
74 | c3f93D_ |
| not modelled | 23.1 | 20 | PDB header:hydrolase Chain: D: PDB Molecule:beta-glucosidase; PDBTitle: crystal structure of exo-1,3/1,4-beta-glucanase (exop) from2 pseudoalteromonas sp. bb1
75 | d2nmla1 |
| not modelled | 22.8 | 13 | Fold:ERH-like Superfamily:ERH-like Family:ERH-like
76 | c2nn3D_ |
| not modelled | 22.3 | 15 | PDB header:hydrolase Chain: D: PDB Molecule:caspase-1; PDBTitle: structure of pro-sf-caspase-1
77 | d1rvga_ |
| not modelled | 22.2 | 20 | Fold:TIM beta/alpha-barrel Superfamily:Aldolase Family:Class II FBP aldolase
78 | c3tqkA_ |
| not modelled | 22.1 | 16 | PDB header:transferase Chain: A: PDB Molecule:phospho-2-dehydro-3-deoxyheptonate aldolase; PDBTitle: structure of phospho-2-dehydro-3-deoxyheptonate aldolase from2 francisella tularensis schu s4
79 | d2aeea1 |
| not modelled | 21.5 | 15 | Fold:PRTase-like Superfamily:PRTase-like Family:Phosphoribosyltransferases (PRTases)
80 | c2w37A_ |
| not modelled | 21.0 | 18 | PDB header:transferase Chain: A: PDB Molecule:ornithine carbamoyltransferase, catabolic; PDBTitle: crystal structure of the hexameric catabolic ornithine2 transcarbamylase from lactobacillus hilgardii
81 | d1m72a_ |
| not modelled | 20.6 | 17 | Fold:Caspase-like Superfamily:Caspase-like Family:Caspase catalytic domain
82 | c3nolA_ |
| not modelled | 20.5 | 18 | PDB header:transferase Chain: A: PDB Molecule:glutamine cyclotransferase; PDBTitle: crystal structure of zymomonas mobilis glutaminyl cyclase (trigonal2 form)
83 | c3q94B_ |
| not modelled | 19.9 | 20 | PDB header:lyase Chain: B: PDB Molecule:fructose-bisphosphate aldolase, class ii; PDBTitle: the crystal structure of fructose 1,6-bisphosphate aldolase from2 bacillus anthracis str. 'ames ancestor'
84 | d1dxha2 |
| not modelled | 19.7 | 19 | Fold:ATC-like Superfamily:Aspartate/ornithine carbamoyltransferase Family:Aspartate/ornithine carbamoyltransferase
85 | c2if2C_ |
| not modelled | 19.0 | 11 | PDB header:transferase Chain: C: PDB Molecule:dephospho-coa kinase; PDBTitle: crystal structure of the putative dephospho-coa kinase from aquifex2 aeolicus, northeast structural genomics target qr72.
86 | c3mw8A_ |
| not modelled | 19.0 | 9 | PDB header:lyase Chain: A: PDB Molecule:uroporphyrinogen-iii synthase; PDBTitle: crystal structure of an uroporphyrinogen-iii synthase (sama_3255) from2 shewanella amazonensis sb2b at 1.65 a resolution
87 | d1ycga1 |
| not modelled | 18.9 | 17 | Fold:Flavodoxin-like Superfamily:Flavoproteins Family:Flavodoxin-related
88 | c1qduI_ |
| not modelled | 18.7 | 5 | PDB header:hydrolase/hydrolase inhibitor Chain: I: PDB Molecule:caspase-8 alpha-chain; PDBTitle: crystal structure of the complex of caspase-8 with the tripeptide2 ketone inhibitor zevd-dcbmk
89 | c2wnsB_ |
| not modelled | 18.5 | 16 | PDB header:transferase Chain: B: PDB Molecule:orotate phosphoribosyltransferase; PDBTitle: human orotate phosphoribosyltransferase (oprtase) domain of2 uridine 5'-monophosphate synthase (umps) in complex with3 its substrate orotidine 5'-monophosphate (omp)
90 | d1tubb1 |
| not modelled | 18.4 | 16 | Fold:Tubulin nucleotide-binding domain-like Superfamily:Tubulin nucleotide-binding domain-like Family:Tubulin, GTPase domain
91 | d1k1ga_ |
| not modelled | 18.4 | 30 | Fold:Eukaryotic type KH-domain (KH-domain type I) Superfamily:Eukaryotic type KH-domain (KH-domain type I) Family:Eukaryotic type KH-domain (KH-domain type I)
92 | c2au3A_ |
| not modelled | 18.3 | 17 | PDB header:transferase Chain: A: PDB Molecule:dna primase; PDBTitle: crystal structure of the aquifex aeolicus primase (zinc binding and2 rna polymerase domains)
93 | c1a1sA_ |
| not modelled | 18.3 | 19 | PDB header:transcarbamylase Chain: A: PDB Molecule:ornithine carbamoyltransferase; PDBTitle: ornithine carbamoyltransferase from pyrococcus furiosus
94 | c3chgB_ |
| not modelled | 17.7 | 16 | PDB header:ligand binding protein Chain: B: PDB Molecule:glycine betaine-binding protein; PDBTitle: the compatible solute-binding protein opuac from bacillus2 subtilis in complex with dmsa
95 | c3edqC_ |
| not modelled | 17.6 | 7 | PDB header:hydrolase/hydrolase inhibitor Chain: C: PDB Molecule:caspase-3; PDBTitle: crystal structure of caspase-3 with inhibitor ac-ldesd-cho
96 | c3hdtB_ |
| not modelled | 17.2 | 16 | PDB header:structural genomics, unknown function Chain: B: PDB Molecule:putative kinase; PDBTitle: crystal structure of putative kinase from clostridium symbiosum atcc2 14940
97 | c3c52B_ |
| not modelled | 16.9 | 30 | PDB header:lyase Chain: B: PDB Molecule:fructose-bisphosphate aldolase; PDBTitle: class ii fructose-1,6-bisphosphate aldolase from2 helicobacter pylori in complex with3 phosphoglycolohydroxamic acid, a competitive inhibitor
98 | c2p2gD_ |
| not modelled | 16.2 | 22 | PDB header:transferase Chain: D: PDB Molecule:ornithine carbamoyltransferase; PDBTitle: crystal structure of ornithine carbamoyltransferase from mycobacterium2 tuberculosis (rv1656): orthorhombic form
99 | c1tvmA_ |
| not modelled | 16.1 | 13 | PDB header:transferase Chain: A: PDB Molecule:pts system, galactitol-specific iib component; PDBTitle: nmr structure of enzyme gatb of the galactitol-specific2 phosphoenolpyruvate-dependent phosphotransferase system

Binding site prediction |

Due to computational demand, binding site predictions are not run for batch jobs

If you want to predict binding sites, please manually submit your model of choice to 3DLigandSite

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
If you use the binding site predictions from 3DLigandSite, please also cite:
3DLigandSite: predicting ligand-binding sites using similar structures.
Wass MN, Kelley LA and Sternberg MJ Nucleic Acids Research 38, W469-73 (2010) [PubMed]
© Structural Bioinformatics Group
Imperial College London
Lawrence Kelley, Benjamin Jefferys
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Component software
Template detection: HHpred 1.51
Secondary structure prediction: Psi-pred 2.5
Disorder prediction: Disopred 2.4
Transmembrane prediction: Memsat_SVM
Multi-template modelling and ab initio: Poing 1.0