07/01/2012 01:22:53 : INFO  : Run start: Sat Jan  7 01:22:53 GMT 2012
07/01/2012 01:22:54 : INFO  : Initialised job
07/01/2012 01:22:55 : INFO  : Renaming log file 'phyre2_20120107_012253.log' to '/bmm/www/servers/phyre2/public_html/phyre2_output/6f1d53f509f8b040/phyre_20120107_012253.log'
07/01/2012 01:22:55 : INFO  : Initialised job:
Sequence
>batch____
MAIHNRAGQPAQQSDLINVAQLTAQYYVLKPEAGNAEHAVKFGTSGHRGSAARHSFNEPH
ILAIAQAIAEERAKNGITGPCYVGKDTHALSEPAFISVLEVLAANGVDVIVQENNGFTPT
PAVSNAILVHNKKGGPLADGIVITPSHNPPEDGGIKYNPPNGGPADTNVTKVVEDRANAL
LADGLKGVKRISLDEAMASGHVKEQDLVQPFVEGLADIVDMAAIQKAGLTLGVDPLGGSG
IEYWKRIGEYYNLNLTIVNDQVDQTFRFMHLDKDGAIRMDCSSECAMAGLLALRDKFDLA
FANDPDYDRHGIVTPAGLMNPNHYLAVAINYLFQHRPQWGKDVAVGKTLVSSAMIDRVVN
DLGRKLVEVPVGFKWFVDGLFDGSFGFGGEESAGASFLRFDGTPWSTDKDGIIMCLLAAE
ITAVTGKNPQEHYNELAKRFGAPSYNRLQAAATSAQKAALSKLSPEMVSASTLAGDPITA
RLTAAPGNGASIGGLKVMTDNGWFAARPSGTEDAYKIYCESFLGEEHRKQIEKEAVEIVS
EVLKNA

07/01/2012 01:22:55 : INFO  : Checked sequence
07/01/2012 01:22:56 : INFO  : Finding homologues with PSI-BLAST
07/01/2012 01:22:56 : INFO  : PSI-BLAST 3 iterations
07/01/2012 01:25:10 : INFO  : PSI-BLAST 5 iterations
07/01/2012 01:27:24 : INFO  : Finished PSI-BLAST
07/01/2012 01:27:24 : INFO  : Running Buildali to generate a3m file
07/01/2012 01:36:50 : INFO  : Converting to HMM
07/01/2012 01:36:58 : INFO  : Calibrating HMM
07/01/2012 01:37:18 : INFO  : Searching HMM database
07/01/2012 01:47:45 : INFO  : Finished buildali
07/01/2012 01:47:46 : INFO  : Predicting secondary structure
07/01/2012 01:47:52 : INFO  : Predicted secondary structure (PSI-Pred)
07/01/2012 01:47:53 : INFO  : Predicting Disordered regions
07/01/2012 01:47:55 : INFO  : Predicted Disorder (Disopred)
07/01/2012 01:47:56 : INFO  : Running memsat_svm check
07/01/2012 01:50:44 : INFO  : Globular protein
07/01/2012 01:50:44 : INFO  : Predicted Transmembrane (memsat_svm) ID '6f1d53f509f8b040'
07/01/2012 01:50:45 : INFO  : Initialising fold library search
07/01/2012 01:50:48 : INFO  : Initialised search input
07/01/2012 01:50:50 : INFO  : Building Ensemble models
07/01/2012 01:50:54 : INFO  : Building hh.c2fuvB_.model.1.pdb
07/01/2012 01:51:04 : INFO  : Building c2fuvB_.1.pdb
07/01/2012 01:51:15 : INFO  : Building c2z0fA_.2.pdb
07/01/2012 01:51:25 : INFO  : Building c1kfiA_.3.pdb
07/01/2012 01:51:34 : INFO  : Building c1c4gB_.4.pdb
07/01/2012 01:51:41 : INFO  : Building c1wqaB_.5.pdb
07/01/2012 01:51:50 : INFO  : Building c2f7lA_.6.pdb
07/01/2012 01:51:59 : INFO  : Building c3c04A_.7.pdb
07/01/2012 01:52:08 : INFO  : Building c3pdkB_.8.pdb
07/01/2012 01:52:16 : INFO  : Building c1tuoA_.9.pdb
07/01/2012 01:52:26 : INFO  : Building c3i3wB_.10.pdb
07/01/2012 01:52:35 : INFO  : Building c2dkdA_.11.pdb
07/01/2012 01:52:43 : INFO  : Building d1kfia1.12.pdb
07/01/2012 01:52:52 : INFO  : Building d3pmga1.13.pdb
07/01/2012 01:53:01 : INFO  : Building d1p5dx1.14.pdb
07/01/2012 01:53:09 : INFO  : Building d3pmga3.15.pdb
07/01/2012 01:53:18 : INFO  : Building d1kfia3.16.pdb
07/01/2012 01:53:31 : INFO  : Building d1p5dx3.17.pdb
07/01/2012 01:53:40 : INFO  : Building d1p5dx2.18.pdb
07/01/2012 01:53:49 : INFO  : Building d1kfia2.19.pdb
07/01/2012 01:53:58 : INFO  : Building d3pmga2.20.pdb
07/01/2012 01:54:21 : INFO  : Finished HH model building
07/01/2012 01:54:22 : WARN  : Set python to /bmm/www/servers/phyre2/bin//newpython/python2.6
07/01/2012 01:55:09 : INFO  : html domain output complete ID '6f1d53f509f8b040'
07/01/2012 04:40:34 : INFO  : Run end  : Sat Jan  7 04:40:33 GMT 2012
