321 d1jcna1 Probab=72.94   E-value=7.3  Score=19.15  Aligned_columns=228  Identities=18%

Q ss_pred             CCCCCHHHHHHH-HHHCCCEEEEECCCCHHHHHHHHHHHHHCCCCEEEEECHHHHHHCCHHHHHHHHHHHHHHCCCCEEE
Q ss_conf             976378999999-9847985882054899999999999996099999984725542079899999999999856998999
Q batch____         1 MYVVSTKQMLNN-AQRGGYAVPAFNIHNLETMQVVVETAANLHAPVIIAGTPGTFTHAGTENLLALVSAMAKQYHHPLAI   79 (284)
Q Consensus         1 M~lv~~k~ll~~-A~~~~yAV~AfN~~n~e~~~avi~AAe~~~sPvIlq~~~~~~~~~g~~~~~~~~~~~A~~a~VPV~l   79 (284)
                      |.-++..+|-.. |+.++.++..-+..-.+....+-..-+..+.|...+.....                    -..-+.
T Consensus        61 M~g~s~~~lA~a~a~~Gglg~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~~~~  120 (320)
T d1jcna1          61 MDTVTEADMAIAMALMGGIGFIHHNCTPEFQANEVRKVKNFEDYPLASKDSQKQ--------------------LLCGAA  120 (320)
T ss_dssp             CTTTCSHHHHHHHHHTTCEEEECCSSCHHHHHHHHHHHHTCCCCTTCCBCTTSC--------------------BCCEEE
T ss_pred             CCCCCCHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCCCC--------------------CCCCCC
T ss_conf             656789999999998798178607899899999999899864011101123344--------------------311410


Q ss_pred             ECCCCCCHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEEECCCCCCCCCCCCCCCCCCHHH
Q ss_conf             86777999999999971897787323338989999999999999986798599997640567776655544444799899
Q batch____        80 HLDHHTKFDDIAQKVRSGVRSVMIDASHLPFAQNISRVKEVVDFCHRFDVSVEAELGQLGGQEDDVQVNEADALYTNPAQ  159 (284)
Q Consensus        80 HLDH~~~~e~i~~ai~~GftSVMiDgS~lp~eeNi~~T~evv~~Ah~~gv~VEaElG~v~g~e~~~~~~~~~~~~T~pee  159 (284)
                      -.......+.....++.|-.-+-+|.++-.....+...+++.+.....-+.+    +.+                ++|++
T Consensus       121 ~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~piiv----k~v----------------~s~ed  180 (320)
T d1jcna1         121 VGTREDDKYRLDLLTQAGVDVIVLDSSQGNSVYQIAMVHYIKQKYPHLQVIG----GNV----------------VTAAQ  180 (320)
T ss_dssp             ECSSTTHHHHHHHHHHTTCSEEEECCSCCCSHHHHHHHHHHHHHCTTCEEEE----EEE----------------CSHHH
T ss_pred             CCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHHCCCCCEEE----CCC----------------CCHHH
T ss_conf             1578768989999984399778812677765310236999997268662998----166----------------89999


Q ss_pred             HHHHHHHHCCCEEEEECCCCCCCCC------CCCCC-CHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHCCCEEEEEC
Q ss_conf             9999988579899885152248878------98553-8899999998609989996588989899999986198389402
Q batch____       160 AREFAEATGIDSLAVAIGTAHGMYA------SAPAL-DFSRLENIRQWVNLPLVLHGASGLSTKDIQQTIKLGICKINVA  232 (284)
Q Consensus       160 a~~Fv~~TgvD~LAvaiGt~HG~Y~------~~p~L-d~~~L~~I~~~~~vPLVlHGgSG~~~e~~~~ai~~Gi~KiNi~  232 (284)
                      |+..++ -|+|.+-|+.+--.+...      +.|.+ .+.++.+.....++|++.=||=-.+ .++.|+..+|-.=|=++
T Consensus       181 A~~a~~-aGvd~I~Vsg~gG~~~~~~~~~~~~~p~i~~~~~~~~~~~~~~vpViadGGIr~g-~Dv~kALaLGAdaV~iG  258 (320)
T d1jcna1         181 AKNLID-AGVDGLRVGMGCGSICITQEVMACGRPQGTAVYKVAEYARRFGVPIIADGGIQTV-GHVVKALALGASTVMMG  258 (320)
T ss_dssp             HHHHHH-HTCSEEEECSSCSCCBTTBCCCSCCCCHHHHHHHHHHHHGGGTCCEEEESCCCSH-HHHHHHHHTTCSEEEES
T ss_pred             HHHHHH-CCCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEECCCCCH-HHHHHHHHCCCCEEEEC
T ss_conf             999996-7998999717688756654235655531001478898403489749997885798-99999997389899988


Q ss_pred             HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC
Q ss_conf             38999999999999996888767899999999999999999999959798
Q batch____       233 TELKNAFSQALKNYLTEHPEATDPRDYLQSAKSAMRDVVSKVIADCGCEG  282 (284)
Q Consensus       233 T~l~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~e~v~~~i~~fgs~g  282 (284)
                      |            .+........-........+.+.+..+.-|.++|+..
T Consensus       259 r------------~fl~~~ea~G~~g~v~~~i~~l~~el~~~m~l~G~~s  296 (320)
T d1jcna1         259 S------------LLAATTEAPGEKGSIQKFVPYLIAGIQHGCQDIGARS  296 (320)
T ss_dssp             T------------TTTTSTTSSCCCCCHHHHHHHHHHHHHHHHHHHTCSB
T ss_pred             H------------HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf             0------------7774441688720799999999999999999818893