240 c1nu5A_ Probab=86.93   E-value=2.5  Score=22.24  Aligned_columns=114  Identities=14%

Q ss_pred             HHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHH--
Q ss_conf             999999971897787323338989999999999999986798599997640567776655544444799899999998--
Q batch____        88 DDIAQKVRSGVRSVMIDASHLPFAQNISRVKEVVDFCHRFDVSVEAELGQLGGQEDDVQVNEADALYTNPAQAREFAE--  165 (284)
Q Consensus        88 e~i~~ai~~GftSVMiDgS~lp~eeNi~~T~evv~~Ah~~gv~VEaElG~v~g~e~~~~~~~~~~~~T~peea~~Fv~--  165 (284)
                      +.+.+..+.||+.+=+-.+..++++.+++.+.+.+..               |.+-..-.+-....  ++++|.+|.+  
T Consensus       149 ~~~~~~~~~G~~~~KiKvg~~~~~~d~~~i~avr~~~---------------g~~~~l~vDaN~~~--~~~~A~~~~~~l  211 (369)
T c1nu5A_         149 SALEMIETRRHNRFKVKLGARTPAQDLEHIRSIVKAV---------------GDRASVRVDVNQGW--DEQTASIWIPRL  211 (369)
T ss_dssp             HHHHHHHTTSCSEEEEECSSSCHHHHHHHHHHHHHHH---------------GGGCEEEEECTTCC--CHHHHHHHHHHH
T ss_pred             HHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHC---------------CCCCEEEEECCCCC--CHHHHHHHHHHC
T ss_conf             9999999669989999568999899999999999973---------------99969999879898--999999998620


Q ss_pred             -HHCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHCCCEEE
Q ss_conf             -8579899885152248878985538899999998609989996588989899999986198389
Q batch____       166 -ATGIDSLAVAIGTAHGMYASAPALDFSRLENIRQWVNLPLVLHGASGLSTKDIQQTIKLGICKI  229 (284)
Q Consensus       166 -~TgvD~LAvaiGt~HG~Y~~~p~Ld~~~L~~I~~~~~vPLVlHGgSG~~~e~~~~ai~~Gi~Ki  229 (284)
                       +-+++++=          ..-|.-|++.++++++.+++|+.+ |-|=...+++.++++.|.+.+
T Consensus       212 ~~~~~~~iE----------eP~~~~d~~~~~~l~~~~~ipIa~-dE~~~~~~~~~~~i~~~~~d~  265 (369)
T c1nu5A_         212 EEAGVELVE----------QPVPRANFGALRRLTEQNGVAILA-DESLSSLSSAFELARDHAVDA  265 (369)
T ss_dssp             HHHTCCEEE----------CCSCTTCHHHHHHHHHHCSSEEEE-STTCCSHHHHHHHHHTTCCSE
T ss_pred             CCCCCEEEE----------CCCCCCCHHHHHHHHHHCCCCEEC-CCCCCCHHHHHHHHHCCCCCE
T ss_conf             007737998----------799814888899999874994984-887688999999998289988