297 d1rfna_ Probab=97.74   E-value=0.0018  Score=38.02  Aligned_columns=179  Identities=15%

Q ss_pred             CCEEEEEEEECCCCCCCCCCCCCEEEEEEEECCCEEEEEHHHHCCCCEEEEEECCC---------CEEEEEEEEECCCC-
Q ss_conf             74399999972477776555442045999808908997178735785699995899---------29998999864778-
Q batch____        56 PAVVNVYNRGLNTNSHNQLEIRTLGSGVIMDQRGYIITNKHVINDADQIIVALQDG---------RVFEALLVGSDSLT-  125 (355)
Q Consensus        56 ~svV~I~~~~~~~~~~~~~~~~~~GtG~ii~~~G~IlT~~Hvv~~~~~~~V~~~dg---------~~~~a~v~~~d~~~-  125 (355)
                      |.+|.|           .......|+|.+|+++ ||||+|||+.+..........+         ............+. 
T Consensus        13 Pw~v~i-----------~~~~~~~C~GtLIs~~-~VLTaAhCv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (235)
T d1rfna_          13 PWQVVL-----------NGKVDAFCGGSIVNEK-WIVTAAHCVETGVKITVVAGEHNIEETEHTEQKRNVIRIIPHHNYN   80 (235)
T ss_dssp             TTEEEE-----------ESSSTTCEEEEEEETT-EEEECGGGCCTTCCCEEEESCSBSSSCCSCCEEEEEEEEEECTTCB
T ss_pred             CCEEEE-----------EECCEEEEEEEEECCC-EEEECHHHCCCCCCCEEEEEEEEECCCCCCEEEEEEEEEEEEECCC
T ss_conf             878999-----------8089118999995199-7990427504872210243233311577520354322221000223


Q ss_pred             --------CEEEEEE-------CCCCCCCEEECCCCCCCCCCCEEEEEECCCCCCCEEEEEEEEEECCC-----------
Q ss_conf             --------7799994-------48778500102565545569749999627887751467798531243-----------
Q batch____       126 --------DLAVLKI-------NATGGLPTIPINARRVPHIGDVVLAIGNPYNLGQTITQGIISATGRI-----------  179 (355)
Q Consensus       126 --------DlAlLki-------~~~~~~~~~~~~~~~~~~~g~~v~aiG~p~~~~~~~~~G~is~~~r~-----------  179 (355)
                              |+++++.       ...................+......+....................           
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (235)
T d1rfna_          81 AAINKYNHDIALLELDEPLVLNSYVTPICIADKEYTNIFLKFGSGYVSGWGRVFHKGRSALVLQYLRVPLVDRATCLRST  160 (235)
T ss_dssp             TTTBSSTTCCEEEEESSCCCCBTTBCCCBCCCHHHHHHHHTTSEEEEEESCBSSTTSCBCSBCEEEEEEBCCHHHHHHHC
T ss_pred             CCCCCCCCCCEEEECCCEEEECCCCCEEECCCCCCCCCCCCCCEEEEEEECCEEEECCCCCCEEEEEEEEECHHHHHHHC
T ss_conf             46665454202331131110013342122167666554467506898750420000025551038865764567753201


Q ss_pred             ---CCCCCCCCCEEEEEEEECCCCCCCEEECCCC---EEEEEEEEEEECCCCCCCCCCEEEEEEHHHHHHHHHHHCC
Q ss_conf             ---3467776527999701058876762577797---5999998643067776653445668779899988986402
Q batch____       180 ---GLNPTGRQNFLQTDASINHGNSGGALVNSLG---ELMGINTLSFDKSNDGETPEGIGFAIPFQLATKIMDKLIR  250 (355)
Q Consensus       180 ---~~~~~~~~~~i~~da~i~~G~SGgPl~n~~G---~VVGI~~~~~~~~~~~~~~~~~~~aIP~~~v~~~~~~l~~  250 (355)
                         ..........-........|.+|+|++..+.   .++||.+..........    .+.+.-+....+++++-.+
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~d~g~~l~~~~~~~~~l~Gi~S~g~~c~~~~~----p~vyt~V~~y~~WI~~~~~  233 (235)
T d1rfna_         161 KFTIYNNMFCAGFHEGGRDSCQGDSGGPHVTEVEGTSFLTGIISWGEECAMKGK----YGIYTKVSRYVNWIKEKTK  233 (235)
T ss_dssp             SSCCCTTEEEESCSSCSCBCCTTCTTCEEEEESSSCEEEEEEEEEESSSSCTTC----CEEEEEGGGTHHHHHHHHC
T ss_pred             CCCCCCCEEEEECCCCCCEECCCCCCCEEEECCCCEEEEEEEEEECCCCCCCCC----CEEEEEHHHHHHHHHHHHC
T ss_conf             455786316874177771000125663359833993999999972678988889----7799884887778999838