BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (299 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_Q9JMR6 Uncharacterized protein yuaY n=6 Tax=Enterobacte... 613 e-174 UniRef50_B0UF11 Nucleotide-binding protein-like protein containi... 310 5e-83 UniRef50_UPI0001A454BD nucleotide-binding protein n=1 Tax=Neisse... 228 2e-58 UniRef50_D0LNL0 Nucleotide-binding protein, predicted, TIR-like ... 174 5e-42 UniRef50_A4JRY7 Nucleotide-binding protein containing TIR-like d... 160 6e-38 UniRef50_Q21MV2 Nucleotide-binding protein containing TIR-like p... 154 3e-36 UniRef50_Q0HFN8 Nucleotide-binding protein containing TIR-like d... 154 5e-36 UniRef50_B3QLE0 Nucleotide-binding protein containing TIR-like p... 146 7e-34 UniRef50_Q4C066 Similar to nucleotide-binding protein containing... 145 1e-33 UniRef50_B1ZZI8 Nucleotide-binding protein containing TIR-like p... 143 7e-33 UniRef50_A1ZY85 Putative uncharacterized protein n=1 Tax=Microsc... 136 7e-31 UniRef50_B4S624 Nucleotide-binding protein containing TIR-like p... 136 8e-31 UniRef50_A5EGX1 Putative uncharacterized protein n=1 Tax=Bradyrh... 135 2e-30 UniRef50_C0PW38 Putative uncharacterized protein n=3 Tax=Salmone... 134 4e-30 UniRef50_Q1NBU8 Putative uncharacterized protein n=1 Tax=Sphingo... 134 5e-30 UniRef50_A6AKB0 YebB n=1 Tax=Vibrio harveyi HY01 RepID=A6AKB0_VIBHA 132 2e-29 UniRef50_B1B7E7 Putative uncharacterized protein n=1 Tax=Clostri... 130 5e-29 UniRef50_Q6D353 Putative uncharacterized protein n=2 Tax=Gammapr... 129 1e-28 UniRef50_B1KWG1 YebB n=1 Tax=Clostridium botulinum A3 str. Loch ... 129 1e-28 UniRef50_A4CFM1 Predicted nucleotide-binding protein n=2 Tax=Gam... 129 2e-28 UniRef50_B0UTQ9 Putative nucleotide-binding protein containing T... 128 2e-28 UniRef50_UPI0001C33D0E hypothetical protein CATC2_14735 n=1 Tax=... 124 3e-27 UniRef50_A1SX31 Putative nucleotide-binding protein containing T... 122 1e-26 UniRef50_D1VA94 Putative uncharacterized protein n=1 Tax=Frankia... 120 4e-26 UniRef50_A1ZY86 Putative uncharacterized protein n=1 Tax=Microsc... 120 5e-26 UniRef50_A4C149 Putative nucleotide-binding protein containing T... 119 9e-26 UniRef50_Q8D9V5 Predicted nucleotide-binding protein n=1 Tax=Vib... 117 4e-25 UniRef50_C3L6B4 Conserved domain protein n=10 Tax=Bacillus anthr... 115 3e-24 UniRef50_B8EAL8 Putative uncharacterized protein n=1 Tax=Shewane... 113 9e-24 UniRef50_Q0YR18 Nucleotide-binding protein containing TIR-like d... 109 1e-22 UniRef50_A3CWB8 Nucleotide-binding protein containing TIR-like d... 109 1e-22 UniRef50_C6M8A7 Putative uncharacterized protein n=1 Tax=Neisser... 107 6e-22 UniRef50_C8PV46 Putative uncharacterized protein n=1 Tax=Enhydro... 107 6e-22 UniRef50_C1DBI6 Putative uncharacterized protein n=1 Tax=Laribac... 101 3e-20 UniRef50_Q8EDI5 Putative uncharacterized protein n=1 Tax=Shewane... 98 3e-19 UniRef50_Q3R8P5 Putative uncharacterized protein n=1 Tax=Xylella... 97 5e-19 UniRef50_C7H3F1 Putative uncharacterized protein n=1 Tax=Faecali... 97 6e-19 UniRef50_Q54F65 Protein tirC n=1 Tax=Dictyostelium discoideum Re... 95 4e-18 UniRef50_B2I7C5 Putative uncharacterized protein n=8 Tax=Proteob... 94 5e-18 UniRef50_B7M8G7 Putative uncharacterized protein n=2 Tax=Escheri... 94 7e-18 UniRef50_Q98RD6 Putative uncharacterized protein MYPU_0730 n=1 T... 89 1e-16 UniRef50_Q3SKL0 Putative uncharacterized protein n=2 Tax=Betapro... 87 9e-16 UniRef50_C6AF08 Putative nucleotide-binding protein n=1 Tax=Bart... 76 1e-12 UniRef50_Q3RAE9 Similar to nucleotide-binding protein containing... 72 2e-11 UniRef50_Q212T3 Putative uncharacterized protein n=1 Tax=Rhodops... 72 3e-11 UniRef50_C3DUD8 Nucleotide-binding protein containing TIR-like d... 70 1e-10 UniRef50_B5JSV8 YebB n=4 Tax=Proteobacteria RepID=B5JSV8_9GAMM 59 3e-07 UniRef50_Q8TKX7 Predicted protein n=1 Tax=Methanosarcina acetivo... 58 5e-07 UniRef50_A4Z1J6 Putative uncharacterized protein n=2 Tax=Rhizobi... 57 8e-07 UniRef50_C6N7T4 Putative uncharacterized protein n=1 Tax=Legione... 56 1e-06 UniRef50_Q120Z2 Putative uncharacterized protein n=1 Tax=Polarom... 55 3e-06 UniRef50_C6W705 Nucleotide-binding protein containing TIR-like d... 54 6e-06 UniRef50_C4ZIE6 Putative uncharacterized protein n=1 Tax=Thauera... 54 8e-06 UniRef50_Q6AL85 Putative uncharacterized protein n=1 Tax=Desulfo... 53 1e-05 UniRef50_Q480E8 Conserved domain protein n=5 Tax=Gammaproteobact... 52 2e-05 UniRef50_C1BE84 Putative uncharacterized protein n=1 Tax=Rhodoco... 52 3e-05 UniRef50_A3EJX2 SH3 domain protein n=2 Tax=Vibrionaceae RepID=A3... 51 4e-05 UniRef50_C1F5N0 Cyclic nucleotide-binding domain protein n=2 Tax... 51 5e-05 UniRef50_B0PHL7 Putative uncharacterized protein n=1 Tax=Anaerot... 51 6e-05 UniRef50_Q24ZU3 Putative uncharacterized protein n=1 Tax=Desulfi... 50 6e-05 UniRef50_A4AGR7 Putative uncharacterized protein n=1 Tax=marine ... 50 8e-05 UniRef50_C9PBW9 Putative uncharacterized protein n=2 Tax=Vibrio ... 49 2e-04 UniRef50_B2FIX1 Putative uncharacterized protein n=1 Tax=Stenotr... 48 4e-04 UniRef50_C6MH81 Nucleotide-binding protein containing TIR-like d... 48 4e-04 UniRef50_C7R666 Nucleotide-binding protein containing TIR-like d... 48 5e-04 UniRef50_B1M988 Cyclic nucleotide-binding n=4 Tax=Proteobacteria... 47 0.001 UniRef50_C5BHR5 Putative uncharacterized protein n=1 Tax=Teredin... 46 0.001 UniRef50_A3IZP6 Putative uncharacterized protein n=1 Tax=Cyanoth... 46 0.002 UniRef50_C5CLS5 TPR repeat-containing protein n=1 Tax=Variovorax... 46 0.002 UniRef50_C3DUD7 Putative uncharacterized protein n=1 Tax=Bacillu... 45 0.002 UniRef50_Q7MKB6 Putative uncharacterized protein VV1889 n=1 Tax=... 45 0.002 UniRef50_A9A6G6 Tetratricopeptide domain protein n=1 Tax=Methano... 44 0.005 UniRef50_A3INK0 Putative uncharacterized protein n=1 Tax=Cyanoth... 44 0.007 UniRef50_C7RC53 Putative uncharacterized protein n=1 Tax=Kangiel... 43 0.011 UniRef50_C2LG65 Putative uncharacterized protein n=1 Tax=Proteus... 43 0.012 UniRef50_A7G517 Conserved domain protein n=3 Tax=Clostridium bot... 42 0.020 UniRef50_B2IV30 Putative uncharacterized protein n=2 Tax=Bacteri... 42 0.023 UniRef50_Q12DK8 Putative uncharacterized protein n=5 Tax=cellula... 41 0.041 UniRef50_C7PYD3 Putative uncharacterized protein n=1 Tax=Catenul... 40 0.082 >UniRef50_Q9JMR6 Uncharacterized protein yuaY n=6 Tax=Enterobacteriaceae RepID=YUAY_ECOLI Length = 299 Score = 613 bits (1582), Expect = e-174, Method: Compositional matrix adjust. Identities = 299/299 (100%), Positives = 299/299 (100%) Query: 1 MAIDIFQSLKNCVFDLQRADVQNYQQPLKQLARLLNSENLQSVNAHLTRNVELDTFLARS 60 MAIDIFQSLKNCVFDLQRADVQNYQQPLKQLARLLNSENLQSVNAHLTRNVELDTFLARS Sbjct: 1 MAIDIFQSLKNCVFDLQRADVQNYQQPLKQLARLLNSENLQSVNAHLTRNVELDTFLARS 60 Query: 61 EDTESSMAGSAVLQWPDEPADILGLKLLLIEKMADDNNFSFNFCHTFFYDRNIIESIRKF 120 EDTESSMAGSAVLQWPDEPADILGLKLLLIEKMADDNNFSFNFCHTFFYDRNIIESIRKF Sbjct: 61 EDTESSMAGSAVLQWPDEPADILGLKLLLIEKMADDNNFSFNFCHTFFYDRNIIESIRKF 120 Query: 121 TSSLVAPFVRDYQLYVENQHDPEPAVFRPVSRKIFIVHGHDNDALQSVARFISRIGLEEI 180 TSSLVAPFVRDYQLYVENQHDPEPAVFRPVSRKIFIVHGHDNDALQSVARFISRIGLEEI Sbjct: 121 TSSLVAPFVRDYQLYVENQHDPEPAVFRPVSRKIFIVHGHDNDALQSVARFISRIGLEEI 180 Query: 181 ILSERPDGSRTIIEKFEAESGDVSFAIVLMTPDDSGSALASESTRLRARQNVLYELGYFA 240 ILSERPDGSRTIIEKFEAESGDVSFAIVLMTPDDSGSALASESTRLRARQNVLYELGYFA Sbjct: 181 ILSERPDGSRTIIEKFEAESGDVSFAIVLMTPDDSGSALASESTRLRARQNVLYELGYFA 240 Query: 241 GKLGRGKVLVLRKGDIEIPSDLAGVLYTELDEHGGWKRKLLSELAYAGVPFDKDKALSA 299 GKLGRGKVLVLRKGDIEIPSDLAGVLYTELDEHGGWKRKLLSELAYAGVPFDKDKALSA Sbjct: 241 GKLGRGKVLVLRKGDIEIPSDLAGVLYTELDEHGGWKRKLLSELAYAGVPFDKDKALSA 299 >UniRef50_B0UF11 Nucleotide-binding protein-like protein containing TIR-like domain n=3 Tax=Proteobacteria RepID=B0UF11_METS4 Length = 301 Score = 310 bits (793), Expect = 5e-83, Method: Compositional matrix adjust. Identities = 148/292 (50%), Positives = 199/292 (68%), Gaps = 1/292 (0%) Query: 4 DIFQSLKNCVFDLQRADVQNYQQPLKQLARLLNSENLQSVNAHLTRNVELDTFLARSEDT 63 D+F + N V DLQ A +Q +++PLK LARLL S +LQ +N LT V+ + F+A SE T Sbjct: 6 DVFTQINNAVLDLQGAHLQGFERPLKTLARLLQSPDLQDINRELTSGVDYEGFIAASEAT 65 Query: 64 ESSMAGSAVLQWPDEPADILGLKLLLIEKMADDNNFSFNFCHTFFYDRN-IIESIRKFTS 122 M GS L WP++ LGL L+LIEK+A + + NF H FFY N +I + Sbjct: 66 IGGMVGSGNLVWPEDQKQTLGLTLILIEKLAAEPGHALNFAHNFFYSGNKLIAGLHSLVG 125 Query: 123 SLVAPFVRDYQLYVENQHDPEPAVFRPVSRKIFIVHGHDNDALQSVARFISRIGLEEIIL 182 ++ PF RDY+ YV ++ D +P + + S K+FIVHGHD+ ALQ +ARFI ++GLE I+L Sbjct: 126 QVLIPFARDYKAYVLSRGDVQPRLVQAASNKVFIVHGHDDAALQGLARFIEKLGLEAIVL 185 Query: 183 SERPDGSRTIIEKFEAESGDVSFAIVLMTPDDSGSALASESTRLRARQNVLYELGYFAGK 242 E+PD RTIIEKFE + DV +A+VL+TPDD G A +E RARQNV++ELGYFAG+ Sbjct: 186 KEQPDQGRTIIEKFEQSATDVGYAVVLLTPDDMGGAKTTEEQDTRARQNVIFELGYFAGR 245 Query: 243 LGRGKVLVLRKGDIEIPSDLAGVLYTELDEHGGWKRKLLSELAYAGVPFDKD 294 LGRG+V +L+KG IEIPSDL GV+YTE+D GWK +L+ EL A + FD + Sbjct: 246 LGRGRVCLLKKGRIEIPSDLFGVIYTEMDPSDGWKARLVGELKAAKLDFDAN 297 >UniRef50_UPI0001A454BD nucleotide-binding protein n=1 Tax=Neisseria subflava NJ9703 RepID=UPI0001A454BD Length = 301 Score = 228 bits (582), Expect = 2e-58, Method: Compositional matrix adjust. Identities = 128/297 (43%), Positives = 178/297 (59%), Gaps = 6/297 (2%) Query: 1 MAIDIFQSLKNCVFDLQRADVQNYQQPLKQLARLLNSENLQSVNAHLTRNVELDTFLARS 60 M +DIF+ + N + DLQ +++Q ++ LK+L LLN E L+ N LT N+ L+ L S Sbjct: 1 MGLDIFEEINNAILDLQSSELQTFEWSLKRLNELLNDEVLKVHNDELTENLNLEKLLEDS 60 Query: 61 EDTESSMAGSAVLQWPDEPADILGLKLLLIEKMADDNNFSFNFCHTFFYDRN-IIESIRK 119 +T S GS+ L P + + LG +LL+ +++D N +FCH +FY N II I Sbjct: 61 SNTGGSFVGSSKLLLPTDMKERLGYIILLVNWLSNDTNEVLDFCHHYFYSGNKIIAGIHS 120 Query: 120 FTSSLVAPFVRDYQLYVENQH-DPEPAVFRPVSRKIFIVHGHDNDALQSVARFISRIGLE 178 F ++ PF RDY+ Y+ + + E VS +FIVHG D+ VAR I ++GL Sbjct: 121 FNRQVLIPFARDYKNYITRKGANMEVKSSSIVSNNVFIVHGRDDLLKVEVARLIEKLGLS 180 Query: 179 EIILSERPDGSRTIIEKFEAESGDVSFAIVLMTPDD-SGSALASESTRL--RARQNVLYE 235 IIL E+P+ +TIIEK E E +V F IVL TP D G L++ T L RARQNV++E Sbjct: 181 AIILHEQPNSGKTIIEKIE-EYTNVGFGIVLYTPCDIGGQKLSNLDTDLKPRARQNVVFE 239 Query: 236 LGYFAGKLGRGKVLVLRKGDIEIPSDLAGVLYTELDEHGGWKRKLLSELAYAGVPFD 292 GY GKLGR KV L K ++E PSD++GV+Y ++D+ GGWK KL EL AG D Sbjct: 240 HGYLIGKLGRNKVCALVKEEVEFPSDISGVVYQKVDDAGGWKLKLAIELKQAGYSID 296 >UniRef50_D0LNL0 Nucleotide-binding protein, predicted, TIR-like protein n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LNL0_HALO1 Length = 596 Score = 174 bits (440), Expect = 5e-42, Method: Compositional matrix adjust. Identities = 83/145 (57%), Positives = 108/145 (74%), Gaps = 1/145 (0%) Query: 153 KIFIVHGHDNDALQSVARFISRIGLEEIILSERPDGSRTIIEKFEAESGDVSFAIVLMTP 212 K+F+VHGHD +SVARF+ ++G + +IL+ERPD TIIEKFE ES V FAIVL+TP Sbjct: 453 KVFVVHGHDKGVRESVARFLEKLGFDAVILNERPDQGATIIEKFERESKGVCFAIVLLTP 512 Query: 213 DDSGSALASESTRLRARQNVLYELGYFAGKLGRGKVLVLRKGDIEIPSDLAGVLYTELDE 272 DD G + +S +LRARQNV++ELG+F GKLGRG+V +LRKGD+E+ SD GV+Y E D+ Sbjct: 513 DDVGGRIGDDS-QLRARQNVIFELGFFVGKLGRGRVALLRKGDVEMLSDYHGVVYREHDD 571 Query: 273 HGGWKRKLLSELAYAGVPFDKDKAL 297 H GWK L E+ AG+P D +K L Sbjct: 572 HDGWKSWLAGEMKSAGLPIDLNKIL 596 >UniRef50_A4JRY7 Nucleotide-binding protein containing TIR-like domain-like n=3 Tax=Burkholderia RepID=A4JRY7_BURVG Length = 377 Score = 160 bits (405), Expect = 6e-38, Method: Compositional matrix adjust. Identities = 83/169 (49%), Positives = 111/169 (65%), Gaps = 8/169 (4%) Query: 137 ENQHDPEPAVFRPV------SRKIFIVHGHDNDALQSVARFISRIGLEEIILSERPDGSR 190 E+ D E A +P+ SR++F+VHGHD A ++VARF+ +I E IIL E+ + R Sbjct: 211 EDLEDAEHAAPQPIVPAAALSRRVFVVHGHDEGAREAVARFLEKIDFEAIILHEKANQGR 270 Query: 191 TIIEKFEAESGDVSFAIVLMTPDDSGSALASESTRLRARQNVLYELGYFAGKLGRGKVLV 250 T+IEK EA G+V FA+VL+TPDD GS + + RARQNVL ELGYF G+LGR +V Sbjct: 271 TVIEKIEAH-GNVGFAVVLLTPDDVGS-VKDGTPEPRARQNVLLELGYFIGRLGRDRVCA 328 Query: 251 LRKGDIEIPSDLAGVLYTELDEHGGWKRKLLSELAYAGVPFDKDKALSA 299 L++G +EIPSD AGV++ +D GGWK+ L EL G D KA+ A Sbjct: 329 LKRGQLEIPSDFAGVVWEAMDTAGGWKKSLCRELDAMGFAIDWKKAMQA 377 >UniRef50_Q21MV2 Nucleotide-binding protein containing TIR-like protein domain-like protein n=2 Tax=Bacteria RepID=Q21MV2_SACD2 Length = 287 Score = 154 bits (390), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 83/168 (49%), Positives = 107/168 (63%), Gaps = 12/168 (7%) Query: 142 PEPAVFRPVSRK-----------IFIVHGHDNDALQSVARFISRIGLEEIILSERPDGSR 190 PEP+ S+K +FIVHGHD+ A +VARF+ ++GL+ IIL E+PD + Sbjct: 120 PEPSSTASFSQKATKTSSGDLSSVFIVHGHDDAAKVTVARFVEKLGLKAIILHEQPDKGQ 179 Query: 191 TIIEKFEAESGDVSFAIVLMTPDDSGSALAS-ESTRLRARQNVLYELGYFAGKLGRGKVL 249 TIIEKFE+ + +V FAIVL+TPDD S+ A+ E T RARQNV+ ELGYF G LGR KV Sbjct: 180 TIIEKFESNASNVGFAIVLLTPDDIASSKATPEDTMPRARQNVVLELGYFCGSLGRDKVC 239 Query: 250 VLRKGDIEIPSDLAGVLYTELDEHGGWKRKLLSELAYAGVPFDKDKAL 297 VL K ++EIPSD GV+Y W KL E+ AG+ D + AL Sbjct: 240 VLYKDEVEIPSDYLGVIYMPFGSGDSWHFKLAREMKSAGLDIDLNSAL 287 >UniRef50_Q0HFN8 Nucleotide-binding protein containing TIR-like domain-like n=2 Tax=Gammaproteobacteria RepID=Q0HFN8_SHESM Length = 313 Score = 154 bits (388), Expect = 5e-36, Method: Compositional matrix adjust. Identities = 74/144 (51%), Positives = 95/144 (65%) Query: 149 PVSRKIFIVHGHDNDALQSVARFISRIGLEEIILSERPDGSRTIIEKFEAESGDVSFAIV 208 P+ +K+FIVHGHD + VARFIS++GLE IIL E+ GS+TIIEK E + V FAIV Sbjct: 165 PMKKKVFIVHGHDELTKEKVARFISQVGLEPIILHEQVSGSQTIIEKIERYADQVCFAIV 224 Query: 209 LMTPDDSGSALASESTRLRARQNVLYELGYFAGKLGRGKVLVLRKGDIEIPSDLAGVLYT 268 L TP D G+ + + RARQNV++E GYF KLGR KV + KG+IE+P+D +GV+Y Sbjct: 225 LYTPCDRGAKASERTPMFRARQNVVFEHGYFIAKLGRSKVTAIVKGNIELPNDFSGVVYV 284 Query: 269 ELDEHGGWKRKLLSELAYAGVPFD 292 DE WK L E+ AG D Sbjct: 285 PFDESEAWKLSLAREMKGAGCEID 308 >UniRef50_B3QLE0 Nucleotide-binding protein containing TIR-like protein domain-like protein n=1 Tax=Chlorobaculum parvum NCIB 8327 RepID=B3QLE0_CHLP8 Length = 286 Score = 146 bits (369), Expect = 7e-34, Method: Compositional matrix adjust. Identities = 107/285 (37%), Positives = 157/285 (55%), Gaps = 23/285 (8%) Query: 25 QQPLKQLARLLNSENLQSVNAHLTRNV----ELDTFLARSEDTESSMAGSAVLQWPDEPA 80 +QPL++ L +E ++ A L + + E+D +ED +S + G +L+ Sbjct: 4 EQPLQRKPANLKAEQMKRGIARLEQRIAEFEEIDVNTIENED-DSPLEG-LILKANSTLQ 61 Query: 81 DILGLKLLLIEKMADDNNF-SFNFCHTF-FYDRNIIES-IRKFTSSLVAPFVRDYQLYVE 137 DILG + + D F S + H D +I+S I+K +S V +L+ E Sbjct: 62 DILGYDSI---EYFDYKLFESISISHFIPSADITLIKSLIQKELTSAVRQLKTLKELFEE 118 Query: 138 NQHDPEPAVFRPVSR--------KIFIVHGHDNDALQSVARFISRIGLEEIILSERPDGS 189 D E P ++ K+FIVHGHD+ ++VARFI ++GLE IIL E+P+ Sbjct: 119 RIADAEALPENPTAQSLSPINTGKVFIVHGHDHGVKETVARFIEKLGLEPIILHEQPNEG 178 Query: 190 RTIIEKFEAESGDVSFAIVLMTPDDSG-SALASESTRLRARQNVLYELGYFAGKLGRGKV 248 +T+IEK E + FA+VL TPDD+G + + + RARQNV+ ELGYF +LGR +V Sbjct: 179 KTVIEKIERHA-TADFAVVLFTPDDTGYPSKKPDDAKPRARQNVVLELGYFMARLGRNRV 237 Query: 249 LVLRKG-DIEIPSDLAGVLYTELDEHGGWKRKLLSELAYAGVPFD 292 +L+ G DIEIPSD +GVLY D GGWK +L SE+ G+ D Sbjct: 238 ALLQVGDDIEIPSDFSGVLYLTFDNGGGWKYQLASEMKARGMAID 282 >UniRef50_Q4C066 Similar to nucleotide-binding protein containing TIR-like domain n=1 Tax=Crocosphaera watsonii WH 8501 RepID=Q4C066_CROWT Length = 285 Score = 145 bits (367), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 74/145 (51%), Positives = 97/145 (66%), Gaps = 2/145 (1%) Query: 152 RKIFIVHGHDNDALQSVARFISRIGLEEIILSERPDGSRTIIEKFEAESGDVSFAIVLMT 211 + IFIVHGHDN+A + V F+ ++ IIL E+ + +TIIEKFE S DVSFAI+L+T Sbjct: 140 KDIFIVHGHDNEAKREVDVFLRKLDFNPIILHEQTNEGKTIIEKFENYS-DVSFAIILLT 198 Query: 212 PDDSGSAL-ASESTRLRARQNVLYELGYFAGKLGRGKVLVLRKGDIEIPSDLAGVLYTEL 270 PDD G E + RARQNV+ ELGYF GKLGR KV L K +EIPSD +G+LYT++ Sbjct: 199 PDDEGRVRNKDEELKPRARQNVILELGYFMGKLGRDKVCALYKEKVEIPSDYSGILYTKM 258 Query: 271 DEHGGWKRKLLSELAYAGVPFDKDK 295 D GW K+ E+ +G+ D +K Sbjct: 259 DNDSGWHMKIAREIKKSGLDVDLNK 283 >UniRef50_B1ZZI8 Nucleotide-binding protein containing TIR-like protein domain-like protein n=1 Tax=Opitutus terrae PB90-1 RepID=B1ZZI8_OPITP Length = 268 Score = 143 bits (361), Expect = 7e-33, Method: Compositional matrix adjust. Identities = 72/151 (47%), Positives = 99/151 (65%), Gaps = 1/151 (0%) Query: 149 PVSRKIFIVHGHDNDALQSVARFISRIGLEEIILSERPDGSRTIIEKFEAESGDVSFAIV 208 P + +F+VHGHD A +VARF+ ++G+ +IL E+ + T+IEKFE + FA+V Sbjct: 118 PKANSVFLVHGHDEGAKHAVARFLEQLGITPVILQEQVNRGMTVIEKFEEFASRAGFAVV 177 Query: 209 LMTPDDSGSALASES-TRLRARQNVLYELGYFAGKLGRGKVLVLRKGDIEIPSDLAGVLY 267 LMTPDD G A E + R RQNV+ ELGYFA KLGR + LV+ KG++E+PSD+ G+LY Sbjct: 178 LMTPDDIGYAANHEGDKKPRPRQNVILELGYFAAKLGRRRTLVITKGELEMPSDVFGLLY 237 Query: 268 TELDEHGGWKRKLLSELAYAGVPFDKDKALS 298 +D GWK L EL AG D ++AL+ Sbjct: 238 EPMDSSHGWKMVLAQELKSAGFTIDLNRALN 268 >UniRef50_A1ZY85 Putative uncharacterized protein n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZY85_9SPHI Length = 283 Score = 136 bits (343), Expect = 7e-31, Method: Compositional matrix adjust. Identities = 72/144 (50%), Positives = 96/144 (66%), Gaps = 3/144 (2%) Query: 153 KIFIVHGHDNDALQSVARFISRIGLEEIILSERPDGSRTIIEKFEAESGDVSFAIVLMTP 212 K+FIVHGHD VARF+ ++ L IIL E+ DG +TIIEK E S DV ++IVL TP Sbjct: 140 KVFIVHGHDQATKNEVARFLEKLDLTPIILHEQTDGGKTIIEKIEKYS-DVGYSIVLYTP 198 Query: 213 DDSGSALAS-ESTRLRARQNVLYELGYFAGKLGRGKVLVLRKGDIEIPSDLAGVLYTELD 271 D G + + + RARQNV++E G+ GKLGR V L KGDIEIP+D++G++YT++D Sbjct: 199 CDEGYKKGNPDDLKNRARQNVVFEHGFLIGKLGRKHVSTLIKGDIEIPNDISGLVYTKID 258 Query: 272 EHGGWKRKLLSELAYAGVPFDKDK 295 + WK K+L EL AG D +K Sbjct: 259 D-SSWKFKVLDELKNAGYDIDANK 281 >UniRef50_B4S624 Nucleotide-binding protein containing TIR-like protein domain-like protein n=1 Tax=Prosthecochloris aestuarii DSM 271 RepID=B4S624_PROA2 Length = 507 Score = 136 bits (343), Expect = 8e-31, Method: Compositional matrix adjust. Identities = 67/149 (44%), Positives = 108/149 (72%), Gaps = 3/149 (2%) Query: 149 PVS-RKIFIVHGHDNDALQSVARFISRIGLEEIILSERPDGSRTIIEKFEAESGDVSFAI 207 P+S +K+F+VHGH+ DA ++ +++ + LE I ++++P +TII+KF + + DV+FAI Sbjct: 357 PISTKKVFVVHGHNVDARDAIEKYLEDLDLEPITIAKQPHEGQTIIDKFTS-NADVAFAI 415 Query: 208 VLMTPDDSGSALASEST-RLRARQNVLYELGYFAGKLGRGKVLVLRKGDIEIPSDLAGVL 266 VL+T DD+ + + S+ RLRARQNV++ELG+F G+L + V +L KGDIE PSD+ G+ Sbjct: 416 VLLTSDDNCTENHNGSSPRLRARQNVIFELGFFLGRLDKKNVAMLIKGDIEKPSDIEGIG 475 Query: 267 YTELDEHGGWKRKLLSELAYAGVPFDKDK 295 +T ++++G WK KL E+ AG+ DK+K Sbjct: 476 FTVMEDNGAWKSKLADEMKAAGLNIDKNK 504 >UniRef50_A5EGX1 Putative uncharacterized protein n=1 Tax=Bradyrhizobium sp. BTAi1 RepID=A5EGX1_BRASB Length = 291 Score = 135 bits (340), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 69/161 (42%), Positives = 95/161 (59%), Gaps = 3/161 (1%) Query: 141 DPEPAVFRPV--SRKIFIVHGHDNDALQSVARFISRIGLEEIILSERPDGSRTIIEKFEA 198 D +P P S KIF+VHG D A VA F+ +GL+ IIL RP+ R ++ KF Sbjct: 132 DAQPVTLEPAAASNKIFLVHGRDEAAKNEVALFLRNLGLDPIILHLRPNSGRHLLTKFRE 191 Query: 199 ESGDVSFAIVLMTPDDSGSALASESTRLRARQNVLYELGYFAGKLGRGKVLVLRKGDIEI 258 E+ +FA++LMTPDD G +A + RARQNV++ELG+F GKLG V L K ++E Sbjct: 192 EADGANFAVILMTPDDVGG-IAGADVQPRARQNVVFELGFFIGKLGPAHVAALLKSNVEK 250 Query: 259 PSDLAGVLYTELDEHGGWKRKLLSELAYAGVPFDKDKALSA 299 PSD G+ Y + WK +L E+ +A +PFD L+A Sbjct: 251 PSDFDGIAYISYGQGTSWKTELAREMHHARIPFDASAVLTA 291 >UniRef50_C0PW38 Putative uncharacterized protein n=3 Tax=Salmonella enterica RepID=C0PW38_SALPC Length = 279 Score = 134 bits (337), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 70/155 (45%), Positives = 99/155 (63%), Gaps = 2/155 (1%) Query: 142 PEPAVFRPVSRKIFIVHGHDNDALQSVARFISRIGLEEIILSERPDGSRTIIEKFEAESG 201 P + S K+FIVHGHD+ A ARF+ ++ + IIL E+ RTIIEK E + Sbjct: 124 PNKSTTNTKSDKVFIVHGHDDAAKIKTARFVEQLDYKAIILHEQASSGRTIIEKIE-QFT 182 Query: 202 DVSFAIVLMTPDDSGSAL-ASESTRLRARQNVLYELGYFAGKLGRGKVLVLRKGDIEIPS 260 DV FA+VL TPDD G+A ++ +LRARQNV++E G+ GKLGR +V+ L G IE+P+ Sbjct: 183 DVGFAVVLYTPDDIGNAKDNADDLQLRARQNVVFEHGFLIGKLGRDRVVALVDGAIELPN 242 Query: 261 DLAGVLYTELDEHGGWKRKLLSELAYAGVPFDKDK 295 D++GV+Y ++DE W +L E+ AG D +K Sbjct: 243 DISGVVYIKMDEANAWHLQLAKEMKQAGFNIDMNK 277 >UniRef50_Q1NBU8 Putative uncharacterized protein n=1 Tax=Sphingomonas sp. SKA58 RepID=Q1NBU8_9SPHN Length = 315 Score = 134 bits (336), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 66/150 (44%), Positives = 97/150 (64%), Gaps = 9/150 (6%) Query: 150 VSRKIFIVHGHDNDALQSVARFI-SRIGLEEIILSERPDGSRTIIEKFEAESGDVSFAIV 208 V K+F+VHG D A +VARF+ +R+GL IILSERP+ R+I+ KF+ E+ ++A++ Sbjct: 157 VPAKVFLVHGRDEAAKHAVARFLETRVGLGVIILSERPNQGRSILTKFQEEADGAAYAVI 216 Query: 209 LMTPDDSG--------SALASESTRLRARQNVLYELGYFAGKLGRGKVLVLRKGDIEIPS 260 LMTPDD G + +A R RQNV++E+G+F G+LG +V L ++E PS Sbjct: 217 LMTPDDLGQLRPGLLPAGVAPADPAPRPRQNVIFEMGFFIGQLGADRVCALVPPNVERPS 276 Query: 261 DLAGVLYTELDEHGGWKRKLLSELAYAGVP 290 D G++Y D+ GW+RKL++EL A VP Sbjct: 277 DYDGIVYVPFDDQEGWQRKLVTELHAANVP 306 >UniRef50_A6AKB0 YebB n=1 Tax=Vibrio harveyi HY01 RepID=A6AKB0_VIBHA Length = 269 Score = 132 bits (331), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 75/163 (46%), Positives = 103/163 (63%), Gaps = 14/163 (8%) Query: 142 PEPAVFRPVS-------RKIFIVHGHDNDALQSVARFISRIGLEEIILSERPDGSRTIIE 194 P+P V S +K+FIVHG +N+ VARFI ++G E I+L E+ G +TIIE Sbjct: 109 PQPEVKTVTSSKAKFDNQKVFIVHGRENETKIEVARFIEKLGFEAIVLHEQASGGKTIIE 168 Query: 195 KFEAESGDVSFAIVLMTPDDSGSALASESTRL--RARQNVLYELGYFAGKLGRGKVLVLR 252 K E+ + DV FA+VL TPDD G ALA+E L RARQNV++E GY K+GR +V L Sbjct: 169 KIESYT-DVGFAVVLYTPDDVG-ALAAEQQDLKNRARQNVVFEHGYLMAKIGRDRVAPLV 226 Query: 253 KGDIEIPSDLAGVLYTELDEHGGWKRKLLSELAYAGVPFDKDK 295 KG+IE+P+D++GV+Y + W+ L EL+ AG D +K Sbjct: 227 KGNIELPNDISGVVYV---SNENWQVDLAKELSSAGYNVDFNK 266 >UniRef50_B1B7E7 Putative uncharacterized protein n=1 Tax=Clostridium botulinum C str. Eklund RepID=B1B7E7_CLOBO Length = 258 Score = 130 bits (327), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 74/172 (43%), Positives = 104/172 (60%), Gaps = 5/172 (2%) Query: 123 SLVAPFVRDYQLYVENQHDPEPAVFRPVSRKIFIVHGHDNDALQSVARFISRIGLEEIIL 182 +L+ F+ + L+ + + + ++ KIFIVHG DN A VARF+ ++ L I+L Sbjct: 85 ALLGAFIEELNLFDTKEDQCVCDLDKTINNKIFIVHGRDNLAKTEVARFLEKLRLVPIVL 144 Query: 183 SERPDGSRTIIEKFEAESGDVSFAIVLMTPDDSGSALASESTRL--RARQNVLYELGYFA 240 +E+ + TIIEK E S DV FAIVL TP D G L + L RARQNV++E GY Sbjct: 145 NEQANEGTTIIEKLEMNS-DVGFAIVLYTPCDIG-GLNDNTNNLMYRARQNVVFEHGYLI 202 Query: 241 GKLGRGKVLVLRKGDIEIPSDLAGVLYTELDEHGGWKRKLLSELAYAGVPFD 292 GK+GR + L KGDIE P+D++G++YT + E GWK +L +L AG D Sbjct: 203 GKIGRKNISALVKGDIETPNDISGIVYTSM-EGEGWKIQLAKDLKAAGYNID 253 >UniRef50_Q6D353 Putative uncharacterized protein n=2 Tax=Gammaproteobacteria RepID=Q6D353_ERWCT Length = 270 Score = 129 bits (324), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 66/138 (47%), Positives = 85/138 (61%), Gaps = 1/138 (0%) Query: 152 RKIFIVHGHDNDALQSVARFISRIGLEEIILSERPDGSRTIIEKFEAESGDVSFAIVLMT 211 RK+FIVHG +N+ Q V+RFIS +GLE IIL E+ + TIIEK E + D FA+VL T Sbjct: 126 RKVFIVHGRNNEVKQEVSRFISDLGLEPIILHEQANVGMTIIEKIERYTNDADFALVLYT 185 Query: 212 PDDSG-SALASESTRLRARQNVLYELGYFAGKLGRGKVLVLRKGDIEIPSDLAGVLYTEL 270 D G + RARQNV++E GY KLGR V L K +IE P+D++GV+Y L Sbjct: 186 ACDLGRGGDEPNPPKFRARQNVVFEHGYLMAKLGRENVCALVKDNIETPNDISGVVYVPL 245 Query: 271 DEHGGWKRKLLSELAYAG 288 D +G WK + EL G Sbjct: 246 DNYGAWKMSVSKELKTCG 263 >UniRef50_B1KWG1 YebB n=1 Tax=Clostridium botulinum A3 str. Loch Maree RepID=B1KWG1_CLOBM Length = 260 Score = 129 bits (323), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 79/191 (41%), Positives = 109/191 (57%), Gaps = 9/191 (4%) Query: 107 FFYDRNI-IESIRKFTSSL--VAPFVRDYQLYVENQHDPEPAVFRPVSR-KIFIVHGHDN 162 F YD+ I I+ R+ S L + F+ + ++ + E ++R KIFIVHGHD Sbjct: 69 FVYDKEIHIKLEREIGSYLDEINRFIEENTSIIQEKETNESV---EINRNKIFIVHGHDE 125 Query: 163 DALQSVARFISRIGLEEIILSERPDGSRTIIEKFEAESGDVSFAIVLMTPDDSGSALASE 222 AL+ V FI I LE I+L + + TIIEK E E DV FAIVL TP D G++ + Sbjct: 126 LALEQVINFIKDIRLEPIVLKNQANLGNTIIEKIE-EYSDVGFAIVLYTPCDIGASTKDK 184 Query: 223 ST-RLRARQNVLYELGYFAGKLGRGKVLVLRKGDIEIPSDLAGVLYTELDEHGGWKRKLL 281 T RARQNV++E GY GKLGR V L KGD+E P+D++G++Y ELD W+ + Sbjct: 185 DTVNKRARQNVVFEHGYLMGKLGRKNVCALVKGDVEKPNDISGLVYVELDNQKAWRFNIA 244 Query: 282 SELAYAGVPFD 292 ++ G D Sbjct: 245 RDMKKLGYDID 255 >UniRef50_A4CFM1 Predicted nucleotide-binding protein n=2 Tax=Gammaproteobacteria RepID=A4CFM1_9GAMM Length = 305 Score = 129 bits (323), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 66/145 (45%), Positives = 94/145 (64%), Gaps = 3/145 (2%) Query: 144 PAVFRPVSRKIFIVHGHDNDALQSVARFISRIGLEEIILSERPDGSRTIIEKFEAESGDV 203 P VF + ++FIVHGHD+ A ++ FIS +GL+ IIL ++ RTIIEK E S +V Sbjct: 161 PGVFN--TSQVFIVHGHDDIAKLEMSSFISSLGLQPIILHQQASSGRTIIEKIEHYS-NV 217 Query: 204 SFAIVLMTPDDSGSALASESTRLRARQNVLYELGYFAGKLGRGKVLVLRKGDIEIPSDLA 263 F +VL TP D GS + RARQNV++E G+ GKL R +V + KG++E P+D++ Sbjct: 218 GFGVVLYTPCDIGSKAGELTGNYRARQNVVFEHGFLIGKLSRSRVSAVVKGNVETPNDIS 277 Query: 264 GVLYTELDEHGGWKRKLLSELAYAG 288 GV+Y +D+ G WK++L EL AG Sbjct: 278 GVVYVTMDQEGQWKQQLSVELRGAG 302 >UniRef50_B0UTQ9 Putative nucleotide-binding protein containing TIR-like domain n=3 Tax=Bacteria RepID=B0UTQ9_HAES2 Length = 279 Score = 128 bits (322), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 68/141 (48%), Positives = 87/141 (61%), Gaps = 2/141 (1%) Query: 153 KIFIVHGHDNDALQSVARFISRIGLEEIILSERPDGSRTIIEKFEAESGDVSFAIVLMTP 212 K+FIVHG DN+ Q VARFI ++G E IIL E+ TIIEK E + +V F IVL TP Sbjct: 135 KVFIVHGRDNETKQEVARFIEKMGFEPIILHEQSSLGMTIIEKIEKYT-NVGFGIVLYTP 193 Query: 213 DDSGSALAS-ESTRLRARQNVLYELGYFAGKLGRGKVLVLRKGDIEIPSDLAGVLYTELD 271 D G S + + RARQNV++E G+ KLGR V L K DIE P+D++GV+Y D Sbjct: 194 CDKGYEKDSPKEIKSRARQNVVFEHGFLISKLGRNNVCALVKDDIEKPNDISGVVYITFD 253 Query: 272 EHGGWKRKLLSELAYAGVPFD 292 +GGWK L E+ +G D Sbjct: 254 SNGGWKIPLAKEMKSSGYEVD 274 >UniRef50_UPI0001C33D0E hypothetical protein CATC2_14735 n=1 Tax=Citrobacter youngae ATCC 29220 RepID=UPI0001C33D0E Length = 270 Score = 124 bits (312), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 72/170 (42%), Positives = 102/170 (60%), Gaps = 7/170 (4%) Query: 131 DYQLYVENQHDPEPAVFRPVSRKIFIVHGHDNDALQSVARFISRIGLEEIILSERPDGSR 190 +Y L E + + + K+FI+HGHD +A + ARFI ++GLE IILSE+ + + Sbjct: 105 EYSLPNETSDNQDKGNSLLANNKVFIIHGHDGEAKEKTARFIEKLGLEAIILSEQANQGK 164 Query: 191 TIIEKFEAESGDVSFAIVLMTPDDSGSALASEST---RLRARQNVLYELGYFAGKLGRGK 247 TIIEK E + DV FAIVL T DD+G+ A RARQNV++E G G+LGR K Sbjct: 165 TIIEKLEHYT-DVGFAIVLYTGDDAGNTEAEAGIGNLNARARQNVVFEHGLLMGRLGRHK 223 Query: 248 VLVLRKGDIEIPSDLAGVLYTELDEHGGWKRKLLSELAYAGVPFDKDKAL 297 V+ L G +E+PSD+ GV+Y D + W+ ++ E+ AG D +K L Sbjct: 224 VIPLVSGTLELPSDIQGVVYIN-DRN--WQLEVAREIKAAGYDIDMNKVL 270 >UniRef50_A1SX31 Putative nucleotide-binding protein containing TIR-like domain n=1 Tax=Psychromonas ingrahamii 37 RepID=A1SX31_PSYIN Length = 291 Score = 122 bits (307), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 66/147 (44%), Positives = 94/147 (63%), Gaps = 5/147 (3%) Query: 153 KIFIVHGHDNDALQSVARFISRIGLEEIILSERPDGSRTIIEKFEAESGDVSFAIVLMTP 212 +IFIVHGHD+ A VARFI ++G E II+ E+P+ S+TIIEK EA S +V F +V+ +P Sbjct: 148 QIFIVHGHDDSAKLEVARFIEKLGFEPIIIHEQPNASKTIIEKIEAFS-NVGFGVVIYSP 206 Query: 213 DDSGSALASESTRL--RARQNVLYELGYFAGKLGRGKVLVLRKGDIEIPSDLAGVLYTEL 270 D G ++ L RARQNV++E G+ GKLGR KV L G++E P+D++G++YT + Sbjct: 207 CDIGGK-NKDNPELAGRARQNVVFEHGFLIGKLGRSKVCPLVTGNVETPNDISGIVYTSM 265 Query: 271 DEHGGWKRKLLSELAYAGVPFDKDKAL 297 D W+ L EL A D + + Sbjct: 266 DT-SNWQIALAKELRTADYAVDMNDVI 291 >UniRef50_D1VA94 Putative uncharacterized protein n=1 Tax=Frankia sp. EuI1c RepID=D1VA94_9ACTO Length = 167 Score = 120 bits (302), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 68/156 (43%), Positives = 94/156 (60%), Gaps = 4/156 (2%) Query: 144 PAVFRP---VSRKIFIVHGHDNDALQSVARFISR-IGLEEIILSERPDGSRTIIEKFEAE 199 P+V P V R IF+VHG DN A V R + + LE I+L+++P+ +TIIEK E Sbjct: 9 PSVSAPAAVVPRAIFLVHGRDNAARLQVQRVLEKATPLEVIVLADQPNSGQTIIEKLEGH 68 Query: 200 SGDVSFAIVLMTPDDSGSALASESTRLRARQNVLYELGYFAGKLGRGKVLVLRKGDIEIP 259 + +FA++LMT DD G S + RARQNV+ ELGY A KLGR V +L + +E+P Sbjct: 69 FENSAFAVILMTADDEGRLKGSADLQSRARQNVILELGYAAAKLGRRNVAILFEDGVEMP 128 Query: 260 SDLAGVLYTELDEHGGWKRKLLSELAYAGVPFDKDK 295 SD GV T D GW ++L+E+ AG+ D +K Sbjct: 129 SDFHGVGRTLFDSGNGWILEILAEMKVAGIEADLNK 164 >UniRef50_A1ZY86 Putative uncharacterized protein n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZY86_9SPHI Length = 283 Score = 120 bits (302), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 65/142 (45%), Positives = 91/142 (64%), Gaps = 4/142 (2%) Query: 153 KIFIVHGHDNDALQSVARFISRIGLEEIILSERPDGSRTIIEKFEAESGDVSFAIVLMTP 212 ++FIVHGHD+ VARFI + L IILSE+ G +TII+K ++ S +V + IVL TP Sbjct: 138 EVFIVHGHDDSKTDKVARFIQTLSLVPIILSEQASGGQTIIDKLDSNS-NVGYGIVLYTP 196 Query: 213 DDSGSALASES-TRLRARQNVLYELGYFAGKLGRGKVLVL-RKGDIEIPSDLAGVLYTEL 270 D GS + E + RARQNV++E G+ GKLGR +V VL +IE P+D++GVLY ++ Sbjct: 197 CDQGSKIGDEKDAKKRARQNVVFEHGFLIGKLGRSRVCVLITDEEIEKPNDISGVLYIKM 256 Query: 271 DEHGGWKRKLLSELAYAGVPFD 292 + GW+ + EL AG D Sbjct: 257 HD-SGWQLSVAKELNKAGYDVD 277 >UniRef50_A4C149 Putative nucleotide-binding protein containing TIR-like domain n=1 Tax=Polaribacter irgensii 23-P RepID=A4C149_9FLAO Length = 255 Score = 119 bits (299), Expect = 9e-26, Method: Compositional matrix adjust. Identities = 65/141 (46%), Positives = 87/141 (61%), Gaps = 4/141 (2%) Query: 153 KIFIVHGHDNDALQSVARFISRIGLEEIILSERPDGSRTIIEKFEAESGDVSFAIVLMTP 212 K+FIVHGHD+ VARFI ++GL+ IIL E+ TIIEK E E+ +V F IVL TP Sbjct: 113 KVFIVHGHDDLLKNEVARFIEKLGLKAIILHEQASSGNTIIEKIE-ENSNVGFGIVLYTP 171 Query: 213 DDSGSALASE-STRLRARQNVLYELGYFAGKLGRGKVLVLRKGDIEIPSDLAGVLYTELD 271 D G+ + + RARQNV++E GY GK+GR V L KG++E P+D++GV+Y Sbjct: 172 CDIGTKKEENPNMQPRARQNVVFEHGYLIGKIGRRNVCALVKGNVEKPNDISGVVYVSTQ 231 Query: 272 EHGGWKRKLLSELAYAGVPFD 292 E W+ L EL +G D Sbjct: 232 EE--WRLSLAKELRNSGYDID 250 >UniRef50_Q8D9V5 Predicted nucleotide-binding protein n=1 Tax=Vibrio vulnificus RepID=Q8D9V5_VIBVU Length = 299 Score = 117 bits (294), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 63/136 (46%), Positives = 84/136 (61%), Gaps = 1/136 (0%) Query: 153 KIFIVHGHDNDALQSVARFISRIGLEEIILSERPDGSRTIIEKFEAESGDVSFAIVLMTP 212 ++FIVHGHD A V ++ GLE IIL + G RTIIEK + S +V F IVL T Sbjct: 159 QVFIVHGHDEHAKNDVKAYVESKGLEPIILHLQASGGRTIIEKIDHYS-NVGFGIVLYTE 217 Query: 213 DDSGSALASESTRLRARQNVLYELGYFAGKLGRGKVLVLRKGDIEIPSDLAGVLYTELDE 272 D G+ + S + RARQNV++E GY KL R +V L KG +E P+D++GV+Y +D Sbjct: 218 CDLGAKRDTLSFKWRARQNVVFEHGYLIAKLSRERVAALVKGSVETPNDISGVVYVSMDA 277 Query: 273 HGGWKRKLLSELAYAG 288 G WK +L +EL AG Sbjct: 278 AGTWKDELDAELRNAG 293 >UniRef50_C3L6B4 Conserved domain protein n=10 Tax=Bacillus anthracis RepID=C3L6B4_BACAC Length = 273 Score = 115 bits (287), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 60/145 (41%), Positives = 95/145 (65%), Gaps = 11/145 (7%) Query: 153 KIFIVHGHDNDALQSVARFISRIGLEEIILSERPDGSRTIIEKFEAESGDVSFAIVLMTP 212 K+FIVHGHD++ Q + F++ IG++ ++L + T++EKFE S DV +A VL+TP Sbjct: 128 KVFIVHGHDDNLKQQLEIFLNSIGIKPVVLHREANEGLTVLEKFEKHS-DVQYAFVLLTP 186 Query: 213 DDSGSAL-----ASESTRLRARQNVLYELGYFAGKLGRGKVLVLRKGDIEIPSDLAGVLY 267 DD G ++ + E RARQNV++ELG+F GKLGR KV L K +E+P+D++G++Y Sbjct: 187 DDIGCSVKERAKSVEEYSFRARQNVIFELGFFIGKLGRAKVCTLYKDGVELPNDISGLVY 246 Query: 268 TELD---EHGGWKRKLLSELAYAGV 289 +++ E G+ ++ EL AG+ Sbjct: 247 QKVNDNIEDVGY--HIMKELRAAGL 269 >UniRef50_B8EAL8 Putative uncharacterized protein n=1 Tax=Shewanella baltica OS223 RepID=B8EAL8_SHEB2 Length = 268 Score = 113 bits (282), Expect = 9e-24, Method: Compositional matrix adjust. Identities = 65/148 (43%), Positives = 88/148 (59%), Gaps = 7/148 (4%) Query: 151 SRKIFIVHGHDNDALQSVARFISRIGLEEIILSERPD-GSRTIIEKFEAESGDVSFAIVL 209 S+ +FIVHGH+N+ + ARFI ++G E IIL E+ GS TIIEK + FAIVL Sbjct: 123 SKNVFIVHGHNNEVKERTARFIQKLGFEPIILHEQASGGSTTIIEKILEYAKTTDFAIVL 182 Query: 210 MTPDDSGSALASESTRL--RARQNVLYELGYFAGKLGRGKVLVLRKGDIEIPSDLAGVLY 267 T DD G +E + L RARQNV++E G G LGR V+ L +IEIP+D++GV+Y Sbjct: 183 YTADDVGGIKNTEPSVLKPRARQNVVFEHGLLIGLLGRENVVPLVADNIEIPNDISGVVY 242 Query: 268 TELDEHGGWKRKLLSELAYAGVPFDKDK 295 D W+ + E+ AG D +K Sbjct: 243 VRND----WQTAIAKEMKKAGYEIDFNK 266 >UniRef50_Q0YR18 Nucleotide-binding protein containing TIR-like domain-like n=1 Tax=Chlorobium ferrooxidans DSM 13031 RepID=Q0YR18_9CHLB Length = 261 Score = 109 bits (273), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 59/142 (41%), Positives = 86/142 (60%), Gaps = 1/142 (0%) Query: 154 IFIVHGHDNDALQSVARFISRIGLEEIILSERPDGSRTIIEKFEAESGDVSFAIVLMTPD 213 +F+VHG ++ A V+ ++ ++GL+ IIL E+ + +TIIEKFE + +V AIVL T D Sbjct: 120 VFVVHGRNDGAKAQVSSYLLKLGLKPIILHEQLNQGQTIIEKFEKHA-NVKAAIVLFTDD 178 Query: 214 DSGSALASESTRLRARQNVLYELGYFAGKLGRGKVLVLRKGDIEIPSDLAGVLYTELDEH 273 D G E +RARQNV++E GYF GK+GR ++L ++IPSDL G + ELD+ Sbjct: 179 DLGKYRDDEVLEVRARQNVVFEAGYFIGKIGRQNTIILLSSGLKIPSDLQGYVNFELDDR 238 Query: 274 GGWKRKLLSELAYAGVPFDKDK 295 W + EL G D +K Sbjct: 239 QRWHIDVAKELKGIGFNIDMNK 260 >UniRef50_A3CWB8 Nucleotide-binding protein containing TIR-like domain-like n=1 Tax=Methanoculleus marisnigri JR1 RepID=A3CWB8_METMJ Length = 302 Score = 109 bits (272), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 58/163 (35%), Positives = 91/163 (55%), Gaps = 27/163 (16%) Query: 152 RKIFIVHGHDNDALQSVARFISRIGLEEIILSERPDGSRTIIEKFEAESGDVSFAIVLMT 211 R++FIVHGH+ V +F+++ LE IIL ++ + +TIIEK E S V FAI+L+T Sbjct: 140 RRVFIVHGHNEQTKDEVEKFLTKYSLEPIILHKQANLGKTIIEKVEHYSNSVRFAIILLT 199 Query: 212 PDDSGSALAS-------------------------ESTRLRARQNVLYELGYFAGKLGRG 246 DD G+ + ++ + RARQNV++E GYF G LGR Sbjct: 200 GDDIGAKKNTPHNPPSFQTKKGTLIANDQWKNAILDNLKKRARQNVIFEFGYFVGLLGRE 259 Query: 247 KVLVLRKGDIEIPSDLAGVLYTELDEHGGWKRKLLSELAYAGV 289 V++L + +E+PSD G+LY L+ W+ +L++E+ G+ Sbjct: 260 NVIILYEDGVELPSDTQGLLYISLN--SDWQNQLVNEIKAVGI 300 >UniRef50_C6M8A7 Putative uncharacterized protein n=1 Tax=Neisseria sicca ATCC 29256 RepID=C6M8A7_NEISI Length = 259 Score = 107 bits (267), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 57/138 (41%), Positives = 82/138 (59%), Gaps = 8/138 (5%) Query: 153 KIFIVHGHDNDALQSVARFISRIGLEEIILSERPDGSRTIIEKFEAESG----DVSFAIV 208 K+F+VHGHD A + + + ++G+E +L TIIE E + G +V F IV Sbjct: 105 KVFVVHGHDEMAREQLELVLHKLGIEHFVLQNTGGNGLTIIEALEQQIGTAPTEVKFGIV 164 Query: 209 LMTPDDSGSALAS-ESTRLRARQNVLYELGYFAGKLGRGKVLVLRKGDIEIPSDLAGVLY 267 L+TPDD G A+ S + + RARQNV+ E+G +GR V +L+KGD+E+PSD G+LY Sbjct: 165 LLTPDDMGYAIKSPDKVQPRARQNVVLEMGMLLSSIGRKHVAILKKGDLEVPSDANGILY 224 Query: 268 TELDEHGGWKRKLLSELA 285 D H R+ +S LA Sbjct: 225 IGFDNH---VRETVSRLA 239 >UniRef50_C8PV46 Putative uncharacterized protein n=1 Tax=Enhydrobacter aerosaccus SK60 RepID=C8PV46_9GAMM Length = 287 Score = 107 bits (266), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 61/151 (40%), Positives = 85/151 (56%), Gaps = 5/151 (3%) Query: 149 PVSRKIFIVHGHDNDALQSVARFISRIGLEEIILSERPDGSRTIIEKFEAESGD--VSFA 206 P K+FIVHGHD+ + V F+ +E I+L E+ D S TIIEK E + D + F Sbjct: 136 PKPSKVFIVHGHDDPLINEVKAFLLSQSIEPIVLREQHDASLTIIEKLEQYTSDPAIGFG 195 Query: 207 IVLMTPDDSGSALASESTRLRARQNVLYELGYFAGKLGRGKV--LVLRKGDIEIPSDLAG 264 IVL TPDD G + RLRARQNV++E G G R +V LV ++G +E+P D+ G Sbjct: 196 IVLYTPDDEGKGIKEPEYRLRARQNVVFEHGLLIGLYTRSRVTCLVKKEGFLEMPGDVNG 255 Query: 265 VLYTELDEHGGWKRKLLSELAYAGVPFDKDK 295 V+YT+ + W+ + L +G D K Sbjct: 256 VVYTD-HAYNDWRLSVAHMLNKSGYDIDYSK 285 >UniRef50_C1DBI6 Putative uncharacterized protein n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1DBI6_LARHH Length = 252 Score = 101 bits (251), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 53/129 (41%), Positives = 78/129 (60%), Gaps = 5/129 (3%) Query: 150 VSRKIFIVHGHDNDALQSVARFISRIGLEEIILSERPDGSRTIIEKFEAESGD---VSFA 206 + +++FIVHGHD+ A + + + ++GL+ +L+ TIIE EA+ G SF Sbjct: 95 IPKQVFIVHGHDDTAREQLELVLHKLGLDPYVLANTGGHGLTIIEALEAKIGKNAASSFG 154 Query: 207 IVLMTPDDSGSALAS--ESTRLRARQNVLYELGYFAGKLGRGKVLVLRKGDIEIPSDLAG 264 IVLMTPDD G AL+ +S + RARQNV+ E+G +GR + +L KG +E PSD G Sbjct: 155 IVLMTPDDMGYALSKGQDSAQPRARQNVVLEMGMLISSIGRRNIAILVKGHLEKPSDADG 214 Query: 265 VLYTELDEH 273 +LY + H Sbjct: 215 ILYIPFNNH 223 >UniRef50_Q8EDI5 Putative uncharacterized protein n=1 Tax=Shewanella oneidensis RepID=Q8EDI5_SHEON Length = 271 Score = 98.2 bits (243), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 57/145 (39%), Positives = 76/145 (52%), Gaps = 6/145 (4%) Query: 151 SRKIFIVHGHDNDALQSVARFISRIGLEEIILSERPDGSRTIIEKFEAESGDVSFAIVLM 210 S+K+ IVHGHD A F+ + G + IIL TII+K E + V + IVL Sbjct: 126 SKKVLIVHGHDEAAKYRTEAFLRKHGFDPIILHLNASKGDTIIKKLERLAEGVGYGIVLY 185 Query: 211 TPDDSGSA---LASESTRLRARQNVLYELGYFAGKLGRGKVLVLRKGDIEIPSDLAGVLY 267 TPDD G + RARQNV++E GY G +GR V + +G +E PSD+ GV+Y Sbjct: 186 TPDDMGETKVKAVQHELQPRARQNVVFEHGYLMGLIGRPNVAAIVEGYVEKPSDIDGVVY 245 Query: 268 TELDEHGGWKRKLLSELAYAGVPFD 292 W+ LL EL AG P + Sbjct: 246 I---PSSNWEIDLLRELHEAGYPIN 267 >UniRef50_Q3R8P5 Putative uncharacterized protein n=1 Tax=Xylella fastidiosa subsp. sandyi Ann-1 RepID=Q3R8P5_XYLFA Length = 164 Score = 97.4 bits (241), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 55/124 (44%), Positives = 76/124 (61%), Gaps = 4/124 (3%) Query: 147 FRPVSRKIFIVHGHDNDALQSVARFISRIGLEEIILSERPDGSRTIIEKFEAESGDVSFA 206 FR +S K+F+V+GHD A + + R LE +IL + P +TIIEK E + +V FA Sbjct: 11 FRELS-KVFVVYGHDPVARTELEAMLRRWRLEPLILEQLPSEGQTIIEKLEKYTAEVKFA 69 Query: 207 IVLMTPDDSGSALASESTRL-RARQNVLYELGYFAGKLGRGKVLVLRKG--DIEIPSDLA 263 +VL TPDD G E+ ++ RARQNV+ ELG LGR V +L K ++E PSD+ Sbjct: 70 VVLATPDDEGFCACHENEKIFRARQNVVLELGMMLTLLGRKNVAILMKQQDNMERPSDIQ 129 Query: 264 GVLY 267 G+LY Sbjct: 130 GLLY 133 >UniRef50_C7H3F1 Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H3F1_9FIRM Length = 226 Score = 97.4 bits (241), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 59/149 (39%), Positives = 83/149 (55%), Gaps = 8/149 (5%) Query: 150 VSRKIFIVHGHDNDALQSVARFISRIGLEEIILSERPDGSRTIIEKFEAESGDVSFAIVL 209 +++K+F+V+GHDN+A + + R LE +I+ + +TIIEK E +G +F IVL Sbjct: 76 LNKKVFVVYGHDNNARTQLEAMLRRWDLEPLIIDQLASKGQTIIEKLEEYTGQANFGIVL 135 Query: 210 MTPDDSGSALASE-STRLRARQNVLYELGYFAGKLGRGKVLVL--RKGDIEIPSDLAGVL 266 TPDD G A E + RARQNV+ ELG K+GR KV +L + +E PSD+ G++ Sbjct: 136 ATPDDVGYAKDHEDDKKFRARQNVVLELGMLLAKIGRSKVAILLSQADKMERPSDIDGLI 195 Query: 267 YTELD---EHGGWKRKLLSELAYAGVPFD 292 Y E G K L EL G D Sbjct: 196 YIPFSNNVEEG--KVSLAKELKRNGYTID 222 >UniRef50_Q54F65 Protein tirC n=1 Tax=Dictyostelium discoideum RepID=TIRC_DICDI Length = 201 Score = 94.7 bits (234), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 47/130 (36%), Positives = 73/130 (56%), Gaps = 10/130 (7%) Query: 153 KIFIVHGHDNDALQSVARFISRIGLEEIILSERPDGSRTIIEKFEAESGDVSFAIVLMTP 212 K+FIVHGH+N + V++F+ +G E I+L E+P+ +TIIEK E E + F IV+M+P Sbjct: 55 KVFIVHGHNNIVREKVSKFLFEMGFEPILLFEKPNNGQTIIEKLEKEISNCKFGIVIMSP 114 Query: 213 DDSGSALASESTRL----RARQNVLYELGYFAGKLGRGKVLVL------RKGDIEIPSDL 262 D+ ++ R NV++E GY GK GR V+ L + + ++PSDL Sbjct: 115 DNKAFTKKDSNSDYVEIAYPRLNVVFEFGYLIGKFGRSNVIYLSVPYNGKSQNYDLPSDL 174 Query: 263 AGVLYTELDE 272 G ++ E Sbjct: 175 LGYVWINYTE 184 >UniRef50_B2I7C5 Putative uncharacterized protein n=8 Tax=Proteobacteria RepID=B2I7C5_XYLF2 Length = 234 Score = 94.0 bits (232), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 54/131 (41%), Positives = 74/131 (56%), Gaps = 6/131 (4%) Query: 142 PEP---AVFRPVSRKIFIVHGHDNDALQSVARFISRIGLEEIILSERPDGSRTIIEKFEA 198 P P A +P+ K+F+V+GHD A + + R LE +IL + P +TIIEK E Sbjct: 74 PTPQNGAATKPMLSKVFVVYGHDAAARTELEAMLRRWKLEPLILDQLPSQGQTIIEKLEK 133 Query: 199 ESGDVSFAIVLMTPDDSG-SALASESTRLRARQNVLYELGYFAGKLGRGKVLVLRKG--D 255 + +V FA+VL TPDD G A + RARQNV+ EL LGR V +L K + Sbjct: 134 YTAEVKFAVVLATPDDEGFPACQENEKKFRARQNVVLELDMMLTLLGRKNVAILMKQQDN 193 Query: 256 IEIPSDLAGVL 266 +E PSD+ G+L Sbjct: 194 MERPSDIQGLL 204 >UniRef50_B7M8G7 Putative uncharacterized protein n=2 Tax=Escherichia coli RepID=B7M8G7_ECO8A Length = 253 Score = 93.6 bits (231), Expect = 7e-18, Method: Compositional matrix adjust. Identities = 57/138 (41%), Positives = 82/138 (59%), Gaps = 9/138 (6%) Query: 145 AVFRP--VSRKIFIVHGHDNDALQSVARFISRIGLEEIILSERPDGSR-TIIEKFEAESG 201 AV +P + +KIFIVHGHD+ A + + + ++GL + + + G+ TIIE+ E E G Sbjct: 87 AVEQPSELPKKIFIVHGHDHTAKEQLELILHKLGLPDHFILQNTGGTGLTIIEELEREIG 146 Query: 202 D----VSFAIVLMTPDDSG-SALASES-TRLRARQNVLYELGYFAGKLGRGKVLVLRKGD 255 F IVL+TPDD G S A E+ + RARQNV+ E+G LGR V +L+K Sbjct: 147 QGQTATRFGIVLLTPDDMGYSKRAGEAEIQPRARQNVVLEMGMLLSSLGRSNVAILQKQH 206 Query: 256 IEIPSDLAGVLYTELDEH 273 +E PSD G+LY ++H Sbjct: 207 LEQPSDANGILYLNFNDH 224 >UniRef50_Q98RD6 Putative uncharacterized protein MYPU_0730 n=1 Tax=Mycoplasma pulmonis RepID=Q98RD6_MYCPU Length = 231 Score = 89.4 bits (220), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 54/140 (38%), Positives = 82/140 (58%), Gaps = 3/140 (2%) Query: 153 KIFIVHGHDNDALQSVARFISRIGLEEIILSERPDGSRTIIEKFEAESGDVSFAIVLMTP 212 K+FIVHGHD AL + + + L +I + +I++ + VSFA L+TP Sbjct: 91 KVFIVHGHDKIALLELKDLLRDLKLNVVISQNKTTRGLSILDGVLEDISSVSFAFDLLTP 150 Query: 213 DDSG-SALASESTRL-RARQNVLYELGYFAGKLGRGKVLVLRKGDIEIPSDLAGVLYTEL 270 DD G S L ES L RARQNV++E+G GKL + K+++L K D+E+PSD+ G++Y Sbjct: 151 DDKGYSNLDGESKTLPRARQNVIFEMGMLYGKLPKNKIMILNKNDVELPSDINGMIYKSF 210 Query: 271 -DEHGGWKRKLLSELAYAGV 289 ++ + + +EL AGV Sbjct: 211 KNDIKEIRYDIETELKEAGV 230 >UniRef50_Q3SKL0 Putative uncharacterized protein n=2 Tax=Betaproteobacteria RepID=Q3SKL0_THIDA Length = 261 Score = 86.7 bits (213), Expect = 9e-16, Method: Compositional matrix adjust. Identities = 47/137 (34%), Positives = 79/137 (57%), Gaps = 6/137 (4%) Query: 132 YQLYVENQHDPEPAVFRPVSRKIFIVHGHDNDALQSVARFISRIGLEEIILSERPDGSRT 191 ++L ++ P P + +R++FI HG D + A IGL + L++ P+ RT Sbjct: 109 FELRANSELAP-PLIAAATTRRVFISHGRAPDWREVQAYVEKDIGLPTLELAQEPNQGRT 167 Query: 192 IIEKFEAESGDVSFAIVLMTPDDSGSALASESTRLRARQNVLYELGYFAGKLGRGKVLVL 251 I+ K SG A+++MT DD +A + RAR+NV++E+G+F GK G G+V +L Sbjct: 168 ILAKLMEASGQCDSAVIVMTGDDLDAA-----GQARARENVIHEIGFFQGKYGLGRVCLL 222 Query: 252 RKGDIEIPSDLAGVLYT 268 + + IPS++ G++YT Sbjct: 223 HEEGVSIPSNIHGLVYT 239 >UniRef50_C6AF08 Putative nucleotide-binding protein n=1 Tax=Bartonella grahamii as4aup RepID=C6AF08_BARGA Length = 151 Score = 76.3 bits (186), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 45/127 (35%), Positives = 73/127 (57%), Gaps = 8/127 (6%) Query: 153 KIFIVHGHDNDALQSVARFISRIGLEEIILSERPDGSRTIIEKFEAE----SGDVSFAIV 208 KIFIV+ +++ L+ R + ++GLE +L D T IE F+ E + F IV Sbjct: 3 KIFIVY-NNHTILEQTERVLFKLGLEPYVLKFGSD-DLTTIEDFKQEISMQTNSPKFGIV 60 Query: 209 LMTPDDSGSALASES--TRLRARQNVLYELGYFAGKLGRGKVLVLRKGDIEIPSDLAGVL 266 L+TPDD G A +++ + RA QNV++++G K+ + +L+K D+E+PSD G+ Sbjct: 61 LLTPDDIGYAKSADKKDAQPRANQNVIFKMGMLFPKISCRNIAILKKRDVEVPSDYEGIN 120 Query: 267 YTELDEH 273 Y +EH Sbjct: 121 YIPFNEH 127 >UniRef50_Q3RAE9 Similar to nucleotide-binding protein containing TIR-like domain n=2 Tax=Xylella fastidiosa RepID=Q3RAE9_XYLFA Length = 114 Score = 72.4 bits (176), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 37/89 (41%), Positives = 53/89 (59%), Gaps = 1/89 (1%) Query: 153 KIFIVHGHDNDALQSVARFISRIGLEEIILSERPDGSRTIIEKFEAESGDVSFAIVLMTP 212 K+F+V+GHD+ A + + R LE +IL + P +TIIEK E + +V FA+VL TP Sbjct: 4 KVFVVYGHDDAARTELEAMLRRWKLEPLILDQLPSEGQTIIEKLEKYTAEVKFAVVLATP 63 Query: 213 DDSGSALASESTRL-RARQNVLYELGYFA 240 DD G E+ ++ RARQN G+ A Sbjct: 64 DDEGFRACHENEKMFRARQNCCTGTGHDA 92 >UniRef50_Q212T3 Putative uncharacterized protein n=1 Tax=Rhodopseudomonas palustris BisB18 RepID=Q212T3_RHOPB Length = 253 Score = 71.6 bits (174), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 35/73 (47%), Positives = 54/73 (73%), Gaps = 3/73 (4%) Query: 142 PEPAVFRPVSRKIFIVHGHDNDALQSVARFISRIGLEEIILSERPDGSRTIIEKFEAESG 201 PE + R S+++FIVHGHD++ SV+ F+ IGLE +IL+++ + +TIIEKFE + Sbjct: 152 PEAQLER--SKRVFIVHGHDDNMKLSVSNFLMAIGLEPVILADQVNAGKTIIEKFE-RNA 208 Query: 202 DVSFAIVLMTPDD 214 DV +A+VL++PDD Sbjct: 209 DVGYAVVLLSPDD 221 >UniRef50_C3DUD8 Nucleotide-binding protein containing TIR-like domain n=2 Tax=Bacteria RepID=C3DUD8_BACTS Length = 73 Score = 69.7 bits (169), Expect = 1e-10, Method: Composition-based stats. Identities = 32/70 (45%), Positives = 42/70 (60%) Query: 226 LRARQNVLYELGYFAGKLGRGKVLVLRKGDIEIPSDLAGVLYTELDEHGGWKRKLLSELA 285 +RARQNV++E GY +LGR V L K +IE P+D++GV+Y D GW L EL Sbjct: 1 MRARQNVVFEHGYLIARLGRSNVCALVKDNIEKPNDISGVVYVNYDSGNGWHMALFKELK 60 Query: 286 YAGVPFDKDK 295 AG D +K Sbjct: 61 NAGYELDANK 70 >UniRef50_B5JSV8 YebB n=4 Tax=Proteobacteria RepID=B5JSV8_9GAMM Length = 90 Score = 58.5 bits (140), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 24/54 (44%), Positives = 36/54 (66%) Query: 220 ASESTRLRARQNVLYELGYFAGKLGRGKVLVLRKGDIEIPSDLAGVLYTELDEH 273 +E+ + RARQNV+ E+G +GRG V +L+KG +E PSD G+LY ++H Sbjct: 8 GAENVQPRARQNVVLEMGMLISAVGRGNVAILKKGHLEAPSDAQGILYVPFNDH 61 >UniRef50_Q8TKX7 Predicted protein n=1 Tax=Methanosarcina acetivorans RepID=Q8TKX7_METAC Length = 469 Score = 57.8 bits (138), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 36/97 (37%), Positives = 58/97 (59%), Gaps = 14/97 (14%) Query: 193 IEKFEAESGDVSFAIVLMTPDDSGSALASESTRLRARQNVLYELGYFAGKLGRGKVLVLR 252 +EKFE FAI+++TPDD ++ + R NVL+ELG F G+LGR +V ++ Sbjct: 55 LEKFE-------FAILVLTPDDV--VISRDKVVQLPRDNVLFELGLFMGRLGRKRVFIVY 105 Query: 253 --KGDIEIPSDLAGVLYTEL---DEHGGWKRKLLSEL 284 + ++++PSDLAGV + DE+ K+ ++EL Sbjct: 106 CDEENVKLPSDLAGVTVCRISKPDENKELKKYSITEL 142 >UniRef50_A4Z1J6 Putative uncharacterized protein n=2 Tax=Rhizobiales RepID=A4Z1J6_BRASO Length = 67 Score = 57.0 bits (136), Expect = 8e-07, Method: Composition-based stats. Identities = 26/67 (38%), Positives = 37/67 (55%) Query: 233 LYELGYFAGKLGRGKVLVLRKGDIEIPSDLAGVLYTELDEHGGWKRKLLSELAYAGVPFD 292 ++ELG+F GKLG V L K +E PSD G+ Y + WK +L E+ +A + FD Sbjct: 1 MFELGFFIGKLGPAHVAALLKSGVEKPSDFDGIAYISYGQGTSWKTELAREMLHAKISFD 60 Query: 293 KDKALSA 299 L+A Sbjct: 61 TSAVLTA 67 >UniRef50_C6N7T4 Putative uncharacterized protein n=1 Tax=Legionella drancourtii LLAP12 RepID=C6N7T4_9GAMM Length = 260 Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 37/114 (32%), Positives = 62/114 (54%), Gaps = 9/114 (7%) Query: 154 IFIVHGHDND--ALQSVARFISRIGLEEIILSERPDGSRTIIEKFEAESGDVSFAIVLMT 211 +FI HG +D ++ + +I +E R TI + E S +FAI+++T Sbjct: 125 VFIGHGRSDDWKIIKDDLQDKHKITIESFESGAR--AGHTIRDILEEMSTTSNFAILVLT 182 Query: 212 PDDSGSALASESTRLRARQNVLYELGYFAGKLGRGKVLVLRKGDIEIPSDLAGV 265 +D + +RARQNV++E G F GKLG + +++ + D+EIPS+L G+ Sbjct: 183 AEDE-----LKDGSIRARQNVIHEAGLFQGKLGFNRAIIVLQEDVEIPSNLDGI 231 >UniRef50_Q120Z2 Putative uncharacterized protein n=1 Tax=Polaromonas sp. JS666 RepID=Q120Z2_POLSJ Length = 256 Score = 55.1 bits (131), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 36/155 (23%), Positives = 69/155 (44%), Gaps = 10/155 (6%) Query: 6 FQSLKNCVFDLQRADVQNYQQPLKQLARLLNSENLQSVNAHLTRNVELDTFLARSEDTES 65 + L V D + Q+ + L++ L+ E L + + D +LA++++T Sbjct: 15 LRDLDETVSDFRDTSFQSSESVLQRFVHHLDEEPLAGFLKAVLPVPDFDGWLAKAQNTIG 74 Query: 66 SMAGSAVLQWPDEPADILGLKLLLIEKMADDNNFSFNFCHTFFYD-RNIIESIRKFTSSL 124 SM GS L+WP ++ + +++ L + + +F H F Y R++ + F + L Sbjct: 75 SMVGSGTLEWPPSRSERVAMQVALCRAILNKTVRFLDFVHNFMYTGRDVARHVDDFATKL 134 Query: 125 VAPFVRDYQLYVENQHDPEPAVFRPVSRKIFIVHG 159 + P +RD E+ RP+S +F G Sbjct: 135 LNPLMRDIARLTES---------RPLSPVLFEAMG 160 >UniRef50_C6W705 Nucleotide-binding protein containing TIR-like domain-like protein n=1 Tax=Dyadobacter fermentans DSM 18053 RepID=C6W705_DYAFD Length = 306 Score = 53.9 bits (128), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 25/67 (37%), Positives = 41/67 (61%), Gaps = 2/67 (2%) Query: 205 FAIVLMTPDDSGSALASESTRLRARQNVLYELGYFAGKLGRGKVLVLRKGDIEIPSDLAG 264 FAI+L + DD L ++ + AR NVL+E G + G+LGR + +++ + +PSDL G Sbjct: 57 FAILLASADDV--VLKRDNLEISARDNVLFEFGLYVGRLGRNRAFFVKEKGLNLPSDLYG 114 Query: 265 VLYTELD 271 + +E D Sbjct: 115 ITLSEFD 121 >UniRef50_C4ZIE6 Putative uncharacterized protein n=1 Tax=Thauera sp. MZ1T RepID=C4ZIE6_THASP Length = 303 Score = 53.5 bits (127), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 31/82 (37%), Positives = 47/82 (57%), Gaps = 1/82 (1%) Query: 189 SRTIIEKFEAESGDVSFAIVLMTPDDSGSALASESTRLRARQNVLYELGYFAGKLGRGKV 248 RTII++ E + I L T DD A SE+ + R NV++E GYF+G G+ V Sbjct: 203 GRTIIDQIEEAASRSIAGIFLFTKDDD-LANPSEAHQSVPRDNVVFEAGYFSGLKGKRNV 261 Query: 249 LVLRKGDIEIPSDLAGVLYTEL 270 L++R+ ++P+DL G +Y L Sbjct: 262 LIVREAGSKMPADLGGDIYAAL 283 >UniRef50_Q6AL85 Putative uncharacterized protein n=1 Tax=Desulfotalea psychrophila RepID=Q6AL85_DESPS Length = 258 Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 28/78 (35%), Positives = 47/78 (60%), Gaps = 5/78 (6%) Query: 188 GSRTIIEKFEAESGDVSFAIVLMTPDDSGSALASESTRLRARQNVLYELGYFAGKLGRGK 247 TI + E + +FA+++MT +D ++ +LRARQNV++E+G F G+LG + Sbjct: 162 AGHTIRDILEDMVNNSTFALLVMTAEDE-----QDTGQLRARQNVIHEIGLFQGRLGFNR 216 Query: 248 VLVLRKGDIEIPSDLAGV 265 +VL + E S++AGV Sbjct: 217 AIVLMENSTEEFSNIAGV 234 >UniRef50_Q480E8 Conserved domain protein n=5 Tax=Gammaproteobacteria RepID=Q480E8_COLP3 Length = 280 Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 31/93 (33%), Positives = 49/93 (52%), Gaps = 5/93 (5%) Query: 199 ESGDVSFAIVLMTPDDSGSALASESTRLRARQNVLYELGYFAGKLGRGKVLVLRKGDIEI 258 +S V F+ + +PDD A+ + R NVL+ELG F G +G+ + +++ D+E+ Sbjct: 52 KSKSVDFSAFIFSPDDL--AIMRSREQYVVRDNVLFELGLFIGSIGKERCFIIKPRDVEL 109 Query: 259 --PSDLAGVLYTELDEHGGWKRKLLSELAYAGV 289 PSDL G+ T+ D + L S L YA Sbjct: 110 HFPSDLLGITPTDYDPNRS-DDNLTSSLTYAST 141 >UniRef50_C1BE84 Putative uncharacterized protein n=1 Tax=Rhodococcus opacus B4 RepID=C1BE84_RHOOB Length = 671 Score = 52.0 bits (123), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 49/173 (28%), Positives = 78/173 (45%), Gaps = 20/173 (11%) Query: 139 QHDPEPAVFRPVS-----RKIFIVHGHDNDALQSVARFISRIGLEEIILSERPD----GS 189 Q E V +PV+ R++F+VHG D+ +S+ + + L I E GS Sbjct: 155 QSQRETPVSQPVTSPARDRRVFLVHGRDHRIKKSMVQLLRTFDLRVIEWEEAASYTGSGS 214 Query: 190 RTIIEKFEAESGDVSFAIVLMTPDDSGSA----LASESTRL------RARQNVLYELGYF 239 T ++ A +VL TPDD G L+ + + R NV++E G Sbjct: 215 PTTMDIVTAGMEAAGAVVVLFTPDDLGRCRDEFLSDHDPQFERDLTPQPRMNVIFEAG-M 273 Query: 240 AGKLGRGKVLVLRKGDIEIPSDLAGVLYTELDEHGGWKRKLLSELAYAGVPFD 292 A + R KV+++R G + SD+AGV Y ++ + +R L L G+ D Sbjct: 274 AMQKDREKVVLVRFGGVREMSDIAGVNYVQIKDTSDSRRDLGRRLRNTGLAVD 326 >UniRef50_A3EJX2 SH3 domain protein n=2 Tax=Vibrionaceae RepID=A3EJX2_VIBCH Length = 297 Score = 51.2 bits (121), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 26/77 (33%), Positives = 44/77 (57%), Gaps = 4/77 (5%) Query: 199 ESGDVSFAIVLMTPDDSGSALASESTRLRARQNVLYELGYFAGKLGRGKVLVL--RKGDI 256 ++ +V FA+ + P+D + ++ + R NVL+ELG F G LG+ + +L R D+ Sbjct: 66 KAKNVDFALFIFRPEDL--TMMRDNPKPTVRDNVLFELGLFIGALGKDRCFILKPRNEDL 123 Query: 257 EIPSDLAGVLYTELDEH 273 +P+DL GV + D H Sbjct: 124 HMPTDLLGVNMNDYDPH 140 >UniRef50_C1F5N0 Cyclic nucleotide-binding domain protein n=2 Tax=Bacteria RepID=C1F5N0_ACIC5 Length = 302 Score = 50.8 bits (120), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 29/75 (38%), Positives = 42/75 (56%), Gaps = 4/75 (5%) Query: 193 IEKFEAESGDVSFAIVLMTPDDSGSALASESTRLRARQNVLYELGYFAGKLGRGKVLVL- 251 IE E AI + PDD + + R R NV++ELG+F G+LGR + L++ Sbjct: 196 IESLERALDQSDVAIAVAQPDDITESRGQQ--RATPRDNVIFELGFFMGRLGRHRALLVE 253 Query: 252 -RKGDIEIPSDLAGV 265 R +I +PSDLAG+ Sbjct: 254 PRGEEISLPSDLAGI 268 >UniRef50_B0PHL7 Putative uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PHL7_9FIRM Length = 328 Score = 50.8 bits (120), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 26/77 (33%), Positives = 41/77 (53%), Gaps = 2/77 (2%) Query: 191 TIIEKFEAESGDVSFAIVLMTPDDSGSALASESTRLRARQNVLYELGYFAGKLGRGKVLV 250 + +E ++ +A+VL T DD A+ + AR NVL+E G F G L R + Sbjct: 55 STLENLCKQAAGFDYAVVLYTKDDH--AVVRKKQCFTARDNVLFEHGIFTGVLSRYRTFA 112 Query: 251 LRKGDIEIPSDLAGVLY 267 L + + +PSDL+G+ Y Sbjct: 113 LIQKGVRVPSDLSGITY 129 >UniRef50_Q24ZU3 Putative uncharacterized protein n=1 Tax=Desulfitobacterium hafniense Y51 RepID=Q24ZU3_DESHY Length = 159 Score = 50.4 bits (119), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 37/117 (31%), Positives = 59/117 (50%), Gaps = 11/117 (9%) Query: 182 LSERPDGS-RTIIEKFEAESGDVSFAIVLMTPDDSGSALASESTRLRARQNVLYELGYFA 240 L E P S R I ++ +A AI++ DD + L+ R NV+YE G F Sbjct: 52 LGEYPAESLRNICQQVDA-------AILIFHEDDM--TWYRNNYVLKPRDNVVYEYGLFE 102 Query: 241 GKLGRGKVLVLRKGDIEIPSDLAGVLYTELDEHGGWKRKLLSELAYAGVPFDKDKAL 297 G LG + ++ R+G ++ SDL G+ Y +LD+ + +L+ L + G P D + L Sbjct: 103 GHLGPKRTIICRRGTPKLASDLEGITYCDLDKEYRAQSELIKWLRFLG-PLDGIQKL 158 >UniRef50_A4AGR7 Putative uncharacterized protein n=1 Tax=marine actinobacterium PHSC20C1 RepID=A4AGR7_9ACTN Length = 264 Score = 50.4 bits (119), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 35/120 (29%), Positives = 65/120 (54%), Gaps = 9/120 (7%) Query: 153 KIFIVHGHDN--DALQSVARFISRIGLEEIILSERPDGSRTIIEKFEAESGDVSFAIVLM 210 ++FI HG L++ I I ++ ++ R G TI E ++ + A+++M Sbjct: 129 QVFIGHGRSEAWKDLKNHLTDIHHIKVDAYEVASR--GGFTIREVLDSMLKSSTLALLVM 186 Query: 211 TPDDSGSALASESTRLRARQNVLYELGYFAGKLGRGKVLVLRKGDIEIPSDLAGVLYTEL 270 T +D+ + +RARQNV++E G F G+LG + L+L++ +E+ S++ GV + E Sbjct: 187 TAEDT-----QDDGSMRARQNVVHEAGLFQGRLGFQRALILKERGVELMSNVDGVQFIEF 241 >UniRef50_C9PBW9 Putative uncharacterized protein n=2 Tax=Vibrio RepID=C9PBW9_VIBFU Length = 277 Score = 49.3 bits (116), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 26/79 (32%), Positives = 45/79 (56%), Gaps = 4/79 (5%) Query: 189 SRTIIEKFEAESGDVSFAIVLMTPDDSGSALASESTRLRARQNVLYELGYFAGKLGRGKV 248 S T I+ +S V FA+ + PDD S + + +R NV++E+G F G +G+ + Sbjct: 42 SSTTIDDLVEKSSTVDFALFIFAPDDITSIRSRKEHVVR--DNVIFEMGLFVGAIGKSRS 99 Query: 249 LVLRKGDIE--IPSDLAGV 265 +L+ ++E +P+DL GV Sbjct: 100 FILKPRNVEMHLPTDLLGV 118 >UniRef50_B2FIX1 Putative uncharacterized protein n=1 Tax=Stenotrophomonas maltophilia K279a RepID=B2FIX1_STRMK Length = 256 Score = 48.1 bits (113), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 30/78 (38%), Positives = 48/78 (61%), Gaps = 8/78 (10%) Query: 190 RTIIEKFEAESGDVSFAIVLMTPDDSGSALASESTRLRARQNVLYELGYFAGKLGRGKVL 249 R I+E A+S SFA+++MT +D + S +RARQNV++E G F G+LG + + Sbjct: 161 RDILESMAAKS---SFALLVMTGEDMDA-----SGEMRARQNVIHEAGIFQGRLGFSRAI 212 Query: 250 VLRKGDIEIPSDLAGVLY 267 +L + D+ S++ GV Y Sbjct: 213 MLLEEDVVEFSNVDGVQY 230 >UniRef50_C6MH81 Nucleotide-binding protein containing TIR-like domain-like protein n=1 Tax=Nitrosomonas sp. AL212 RepID=C6MH81_9PROT Length = 287 Score = 48.1 bits (113), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 29/71 (40%), Positives = 39/71 (54%), Gaps = 6/71 (8%) Query: 203 VSFAIVLMTPDDSGSALASESTRLRARQNVLYELGYFAGKLGRGKVLVL--RKGDIEIPS 260 V +A + TPDD E + +R NVL+ELG F G LG+ + ++ R D IPS Sbjct: 55 VDYAAFIFTPDDLIIMRGHEKSAIR--DNVLFELGLFMGSLGKERCFIIHPRNSDHHIPS 112 Query: 261 DLAGVLYTELD 271 DL G+ T LD Sbjct: 113 DLLGL--TSLD 121 >UniRef50_C7R666 Nucleotide-binding protein containing TIR-like domain n=1 Tax=Kangiella koreensis DSM 16069 RepID=C7R666_KANKD Length = 287 Score = 47.8 bits (112), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 30/91 (32%), Positives = 43/91 (47%), Gaps = 6/91 (6%) Query: 187 DGSRTIIEKFEAESGDVSFAIVLMTPDDSGSALASESTRLRARQNVLYELGYFAGKLGRG 246 D S I + + F I + PDD + E+ R NVL+ELG F G LG Sbjct: 40 DLSSVTITSLIKRAKETEFGIFVFHPDDK--TIIRENEYSTVRDNVLFELGLFIGSLGIE 97 Query: 247 KVLVL----RKGDIEIPSDLAGVLYTELDEH 273 + VL ++ + +P+DLAGV T D+ Sbjct: 98 RCFVLIPKSKETEFRLPADLAGVTTTSYDDQ 128 >UniRef50_B1M988 Cyclic nucleotide-binding n=4 Tax=Proteobacteria RepID=B1M988_METRJ Length = 303 Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust. Identities = 26/75 (34%), Positives = 41/75 (54%), Gaps = 4/75 (5%) Query: 193 IEKFEAESGDVSFAIVLMTPDDSGSALASESTRLRARQNVLYELGYFAGKLGRGKVLVL- 251 +E E E FA+ + PDD E R NV++ELG+F G LGR + +++ Sbjct: 196 LETLEEELMQSDFAVAVAHPDDKTEIRDEEWPT--PRDNVVFELGFFMGSLGRQRAVLME 253 Query: 252 -RKGDIEIPSDLAGV 265 + +++PSDLAG+ Sbjct: 254 PKGAKLKLPSDLAGI 268 >UniRef50_C5BHR5 Putative uncharacterized protein n=1 Tax=Teredinibacter turnerae T7901 RepID=C5BHR5_TERTT Length = 276 Score = 46.2 bits (108), Expect = 0.001, Method: Compositional matrix adjust. Identities = 28/85 (32%), Positives = 46/85 (54%), Gaps = 4/85 (4%) Query: 189 SRTIIEKFEAESGDVSFAIVLMTPDDSGSALASESTRLRARQNVLYELGYFAGKLGRGKV 248 S + I+ +S V FA+ + PDD S + S + R NV++E+G F G +G+ + Sbjct: 42 SSSTIDDLVEKSSFVDFALFIFAPDDI-SEIRSRKEHV-VRDNVIFEMGLFVGAIGKSRS 99 Query: 249 LVLRKGDIE--IPSDLAGVLYTELD 271 +L+ IE +P+DL GV + D Sbjct: 100 FILKPRGIEMHLPTDLLGVTPADYD 124 >UniRef50_A3IZP6 Putative uncharacterized protein n=1 Tax=Cyanothece sp. CCY0110 RepID=A3IZP6_9CHRO Length = 320 Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust. Identities = 29/97 (29%), Positives = 49/97 (50%), Gaps = 7/97 (7%) Query: 189 SRTIIEKFEAESGDVSFAIVLMTPDDSGSALASESTRLRARQNVLYELGYFAGKLGRGKV 248 S++ +E + + F+I + TP+D+ + E R R NV++ELG F G LGR + Sbjct: 48 SQSTLEDLCRQVENFDFSIFVFTPNDT-VIIRKEENR-SVRDNVVFELGLFIGNLGRNRC 105 Query: 249 --LVLRKGDIEIPSDLAGV---LYTELDEHGGWKRKL 280 ++ R + +P+DL G+ Y + WK L Sbjct: 106 FFIIPRGEEFHLPTDLLGIKAGTYDSSRQDKNWKAAL 142 >UniRef50_C5CLS5 TPR repeat-containing protein n=1 Tax=Variovorax paradoxus S110 RepID=C5CLS5_VARPS Length = 500 Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust. Identities = 30/81 (37%), Positives = 41/81 (50%), Gaps = 4/81 (4%) Query: 187 DGSRTIIEKFEAESGDVSFAIVLMTPDDSGSALASESTRLRARQNVLYELGYFAGKLGRG 246 D S T IE D FAI + + DD +ES L R NV++E G F G+LGR Sbjct: 40 DLSSTTIESLTKMLHDSDFAIFVFSADDMLKIRKTES--LSVRDNVMFEFGLFVGRLGRE 97 Query: 247 KVLVLRKGD--IEIPSDLAGV 265 +V L + +P+DL G+ Sbjct: 98 RVFFLLPQNEVFHLPTDLLGI 118 >UniRef50_C3DUD7 Putative uncharacterized protein n=1 Tax=Bacillus thuringiensis serovar sotto str. T04001 RepID=C3DUD7_BACTS Length = 136 Score = 45.4 bits (106), Expect = 0.002, Method: Compositional matrix adjust. Identities = 20/38 (52%), Positives = 27/38 (71%) Query: 151 SRKIFIVHGHDNDALQSVARFISRIGLEEIILSERPDG 188 ++K+FIVHGHD SVARF+ R+ L+ IIL E+ G Sbjct: 99 NKKVFIVHGHDESVKISVARFLERLDLKPIILHEQASG 136 >UniRef50_Q7MKB6 Putative uncharacterized protein VV1889 n=1 Tax=Vibrio vulnificus YJ016 RepID=Q7MKB6_VIBVY Length = 293 Score = 45.4 bits (106), Expect = 0.002, Method: Compositional matrix adjust. Identities = 25/63 (39%), Positives = 35/63 (55%), Gaps = 5/63 (7%) Query: 206 AIVLMTPDDSGSALASESTRLRARQNVLYELGYFAGKLGRGKVLVLR---KGDIEIPSDL 262 AI +M+PDD E T R NVL+ELG F G+LG K +++ D +P+DL Sbjct: 62 AIFVMSPDDVVKMRGQEQTV--TRDNVLFELGMFIGRLGPEKTFMVKPRNSQDFHVPTDL 119 Query: 263 AGV 265 G+ Sbjct: 120 LGL 122 >UniRef50_A9A6G6 Tetratricopeptide domain protein n=1 Tax=Methanococcus maripaludis C6 RepID=A9A6G6_METM6 Length = 481 Score = 44.3 bits (103), Expect = 0.005, Method: Compositional matrix adjust. Identities = 28/85 (32%), Positives = 43/85 (50%), Gaps = 4/85 (4%) Query: 189 SRTIIEKFEAESGDVSFAIVLMTPDDSGSALASESTRLRARQNVLYELGYFAGKLGRGKV 248 S+T IE E F I + +D E + +R N+++E G F GKL R +V Sbjct: 41 SKTSIESLENALDSFDFGIFVFNNEDILKIRGEEKSAVR--DNLIFEFGLFIGKLTRERV 98 Query: 249 -LVLRKG-DIEIPSDLAGVLYTELD 271 V+ G D+ +P+DL G+ Y + D Sbjct: 99 FFVIPSGSDLHLPTDLLGITYGQYD 123 >UniRef50_A3INK0 Putative uncharacterized protein n=1 Tax=Cyanothece sp. CCY0110 RepID=A3INK0_9CHRO Length = 264 Score = 43.9 bits (102), Expect = 0.007, Method: Compositional matrix adjust. Identities = 35/97 (36%), Positives = 48/97 (49%), Gaps = 8/97 (8%) Query: 205 FAIVLMTPDDSGSALASESTRLRARQNVLYELGYFAGKLGRGKVLVLR-KG--DIEIPSD 261 FAI + +PDD E R NV++ELG F KLG+ + +L +G D +PSD Sbjct: 57 FAIFVFSPDDISHI--REQKYQAVRDNVIFELGLFIAKLGKRRCFILMPRGIKDFRLPSD 114 Query: 262 LAGVLYTELDEHGGWKRKLLSELAYAGVPFDKDKALS 298 L GV D + LL+ L A FD KA++ Sbjct: 115 LLGVTPATYD-NSRQDNNLLAALGPAC--FDISKAIN 148 >UniRef50_C7RC53 Putative uncharacterized protein n=1 Tax=Kangiella koreensis DSM 16069 RepID=C7RC53_KANKD Length = 365 Score = 43.1 bits (100), Expect = 0.011, Method: Compositional matrix adjust. Identities = 33/137 (24%), Positives = 68/137 (49%), Gaps = 8/137 (5%) Query: 138 NQHDPEPAVFRPVSRK--IFIVHGHDNDALQSVARFISRIGLEEIILSERPDGSRTIIEK 195 N+ +P+P +PV R +FI HG + +Q + ++ ++ E+ S + EK Sbjct: 214 NESEPKP--VKPVQRNSNVFISHGKNKKVVQQLKELLTFGKFNPVVSVEKETASIPVPEK 271 Query: 196 FEAESGDVSFAIVLMTPDDSGSALASESTR-LRARQNVLYELGYFAGKLGRGKVLVLRKG 254 + + S A++ + + L E + + +NVL E+G + VL+++KG Sbjct: 272 VFEDMRECSAAVIHLEAEQ--ELLDPEGNKHSKINENVLIEIGAAIALYNKNFVLLVKKG 329 Query: 255 DIEIPSDLAGVLYTELD 271 +++PS+L G+ +E + Sbjct: 330 -VKLPSNLQGLYRSEYE 345 >UniRef50_C2LG65 Putative uncharacterized protein n=1 Tax=Proteus mirabilis ATCC 29906 RepID=C2LG65_PROMI Length = 368 Score = 43.1 bits (100), Expect = 0.012, Method: Compositional matrix adjust. Identities = 35/132 (26%), Positives = 63/132 (47%), Gaps = 8/132 (6%) Query: 135 YVENQHDPEPAVFRPVSRKIFIVHGHDNDALQSVARFIS-RIGLEEIILSERPDGSRTII 193 ++ N H+ E R V IF+ HG + + + FI ++ L + P T I Sbjct: 217 HISNLHEKETKASR-VGTNIFLGHGRSH-LWRELKDFIKDKLHLPYDEFNRVPIAGTTNI 274 Query: 194 EKFEAESGDVSFAIVLMTPDDSGSALASESTRLRARQNVLYELGYFAGKLGRGKVLVLRK 253 + SFA ++MT +D + ++AR NV++E+G F G+LG K ++L + Sbjct: 275 ARLAQMLDHASFAFLIMTAEDE-----LQDGNMQARMNVIHEVGLFQGRLGFEKAIILLE 329 Query: 254 GDIEIPSDLAGV 265 + S++ G+ Sbjct: 330 EGCQEFSNINGL 341 >UniRef50_A7G517 Conserved domain protein n=3 Tax=Clostridium botulinum A RepID=A7G517_CLOBH Length = 206 Score = 42.4 bits (98), Expect = 0.020, Method: Compositional matrix adjust. Identities = 26/70 (37%), Positives = 37/70 (52%), Gaps = 4/70 (5%) Query: 206 AIVLMTPDDSGSALASESTRLRARQNVLYELGYFAGKLGRGKV--LVLRKGDIEIPSDLA 263 I + TPDD E++ R NV++ELG G LG+ V ++ R D IPSDLA Sbjct: 116 GIFIFTPDDISDI--RENSVSVVRDNVIFELGLAIGILGKQNVFYIIPRGCDFHIPSDLA 173 Query: 264 GVLYTELDEH 273 G+ + D + Sbjct: 174 GITPGDYDAN 183 >UniRef50_B2IV30 Putative uncharacterized protein n=2 Tax=Bacteria RepID=B2IV30_NOSP7 Length = 372 Score = 42.0 bits (97), Expect = 0.023, Method: Compositional matrix adjust. Identities = 39/157 (24%), Positives = 70/157 (44%), Gaps = 16/157 (10%) Query: 112 NIIESIRKFTSSLVAPFVRDYQLYVENQHDPEPAVFRPVSRKIFIVHGHDNDALQSVARF 171 + +S++K + L + Y+ + +P +FI HGH + + + F Sbjct: 206 TVAKSLKKIANRLALHLTNKSRTYM---YSSQPGT------HVFIGHGH-SPLWRDLKDF 255 Query: 172 IS-RIGLEEIILSERPDGSRTIIEKFEAESGDVSFAIVLMTPDDSGSALASESTRLRARQ 230 IS R+ L + P + + A ++MT +D S L +LRAR Sbjct: 256 ISERLKLPWDEFNRLPIAGINNTVRLSQMLDSAAIAFLIMTGEDEQSDL-----KLRARM 310 Query: 231 NVLYELGYFAGKLGRGKVLVLRKGDIEIPSDLAGVLY 267 NV++E G F G+LG + ++L + E S++ G+ Y Sbjct: 311 NVIHEAGLFQGRLGFRRAILLLEEGCENFSNVDGIGY 347 >UniRef50_Q12DK8 Putative uncharacterized protein n=5 Tax=cellular organisms RepID=Q12DK8_POLSJ Length = 433 Score = 41.2 bits (95), Expect = 0.041, Method: Compositional matrix adjust. Identities = 33/141 (23%), Positives = 60/141 (42%), Gaps = 20/141 (14%) Query: 157 VHGHDNDALQSVARFISRIGLEEIILSERPDGSRTIIEKFEAESGDVSFAIVLMTPDDSG 216 V G DA F+ ++GLE +L +++ +A + A +L+ P + Sbjct: 313 VLGWGGDAAGQACEFMEQLGLEAAVLDT------VSVDQLDALR---NVAFLLLLPGEEP 363 Query: 217 SALASESTRLRARQNVLYELGYFAGKLGRGKVLVLRKGDIEIPSDLAGVLYTELDEHGGW 276 A A+ + +G+ LGR +++ L +P L G +DE G W Sbjct: 364 EAPAA-----------MLAIGFMLAVLGRSRIVCLLSDQEALPDALKGATRITVDEAGLW 412 Query: 277 KRKLLSELAYAGVPFDKDKAL 297 + L E+ AG+ D ++A+ Sbjct: 413 RLLLAREMKRAGLDVDLNRAI 433 >UniRef50_C7PYD3 Putative uncharacterized protein n=1 Tax=Catenulispora acidiphila DSM 44928 RepID=C7PYD3_CATAD Length = 585 Score = 40.4 bits (93), Expect = 0.082, Method: Compositional matrix adjust. Identities = 40/152 (26%), Positives = 62/152 (40%), Gaps = 23/152 (15%) Query: 154 IFIVHGHDNDALQSVARFISRIGLEEIILSER--------PDGSRTIIEKFEAESGDVSF 205 +F++HG D A + + GL + E P R + E Sbjct: 410 VFVIHGRDERARVATFDLLRAFGLHPVEWDEAVGLLQQPMPFLGRVLREAIPRAKA---- 465 Query: 206 AIVLMTPDD--------SGSALASEST--RLRARQNVLYELGYFAGKLGRGKVLVLRKGD 255 +V+MTPDD +G + T ++AR NVL ELG R L+L+ GD Sbjct: 466 VVVIMTPDDIVRLHPELAGPSEPGFETGHSMQARPNVLIELGMALAYHPRA-TLILQVGD 524 Query: 256 IEIPSDLAGVLYTELDEHGGWKRKLLSELAYA 287 +DL G Y + E ++ ++ L+YA Sbjct: 525 HRPIADLGGFNYVRVAEGTAFRERIGKRLSYA 556 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_Q9JMR6 Uncharacterized protein yuaY n=6 Tax=Enterobacte... 408 e-112 UniRef50_B0UF11 Nucleotide-binding protein-like protein containi... 384 e-105 UniRef50_UPI0001A454BD nucleotide-binding protein n=1 Tax=Neisse... 366 e-100 UniRef50_B3QLE0 Nucleotide-binding protein containing TIR-like p... 271 3e-71 UniRef50_D0LNL0 Nucleotide-binding protein, predicted, TIR-like ... 211 2e-53 UniRef50_Q0HFN8 Nucleotide-binding protein containing TIR-like d... 209 8e-53 UniRef50_B1B7E7 Putative uncharacterized protein n=1 Tax=Clostri... 207 3e-52 UniRef50_A4JRY7 Nucleotide-binding protein containing TIR-like d... 206 7e-52 UniRef50_B1ZZI8 Nucleotide-binding protein containing TIR-like p... 205 2e-51 UniRef50_Q21MV2 Nucleotide-binding protein containing TIR-like p... 204 3e-51 UniRef50_B1KWG1 YebB n=1 Tax=Clostridium botulinum A3 str. Loch ... 202 8e-51 UniRef50_C0PW38 Putative uncharacterized protein n=3 Tax=Salmone... 201 2e-50 UniRef50_A5EGX1 Putative uncharacterized protein n=1 Tax=Bradyrh... 200 4e-50 UniRef50_A4C149 Putative nucleotide-binding protein containing T... 197 4e-49 UniRef50_UPI0001C33D0E hypothetical protein CATC2_14735 n=1 Tax=... 196 1e-48 UniRef50_B0UTQ9 Putative nucleotide-binding protein containing T... 194 2e-48 UniRef50_Q6D353 Putative uncharacterized protein n=2 Tax=Gammapr... 192 1e-47 UniRef50_Q4C066 Similar to nucleotide-binding protein containing... 191 3e-47 UniRef50_A4CFM1 Predicted nucleotide-binding protein n=2 Tax=Gam... 188 2e-46 UniRef50_A1SX31 Putative nucleotide-binding protein containing T... 187 5e-46 UniRef50_A1ZY85 Putative uncharacterized protein n=1 Tax=Microsc... 187 5e-46 UniRef50_B8EAL8 Putative uncharacterized protein n=1 Tax=Shewane... 184 4e-45 UniRef50_A6AKB0 YebB n=1 Tax=Vibrio harveyi HY01 RepID=A6AKB0_VIBHA 182 1e-44 UniRef50_Q8D9V5 Predicted nucleotide-binding protein n=1 Tax=Vib... 181 2e-44 UniRef50_Q8EDI5 Putative uncharacterized protein n=1 Tax=Shewane... 180 5e-44 UniRef50_Q0YR18 Nucleotide-binding protein containing TIR-like d... 180 7e-44 UniRef50_D1VA94 Putative uncharacterized protein n=1 Tax=Frankia... 179 9e-44 UniRef50_A1ZY86 Putative uncharacterized protein n=1 Tax=Microsc... 179 1e-43 UniRef50_Q1NBU8 Putative uncharacterized protein n=1 Tax=Sphingo... 177 4e-43 UniRef50_Q120Z2 Putative uncharacterized protein n=1 Tax=Polarom... 177 6e-43 UniRef50_B4S624 Nucleotide-binding protein containing TIR-like p... 171 3e-41 UniRef50_C7H3F1 Putative uncharacterized protein n=1 Tax=Faecali... 169 7e-41 UniRef50_C1DBI6 Putative uncharacterized protein n=1 Tax=Laribac... 168 2e-40 UniRef50_Q3R8P5 Putative uncharacterized protein n=1 Tax=Xylella... 168 2e-40 UniRef50_C8PV46 Putative uncharacterized protein n=1 Tax=Enhydro... 166 1e-39 UniRef50_A3CWB8 Nucleotide-binding protein containing TIR-like d... 164 3e-39 UniRef50_C6M8A7 Putative uncharacterized protein n=1 Tax=Neisser... 158 3e-37 UniRef50_C3L6B4 Conserved domain protein n=10 Tax=Bacillus anthr... 157 4e-37 UniRef50_B7M8G7 Putative uncharacterized protein n=2 Tax=Escheri... 155 1e-36 UniRef50_B2I7C5 Putative uncharacterized protein n=8 Tax=Proteob... 154 3e-36 UniRef50_Q3SKL0 Putative uncharacterized protein n=2 Tax=Betapro... 139 9e-32 UniRef50_Q54F65 Protein tirC n=1 Tax=Dictyostelium discoideum Re... 139 1e-31 UniRef50_C1BE84 Putative uncharacterized protein n=1 Tax=Rhodoco... 132 2e-29 UniRef50_C6AF08 Putative nucleotide-binding protein n=1 Tax=Bart... 131 2e-29 UniRef50_Q98RD6 Putative uncharacterized protein MYPU_0730 n=1 T... 129 1e-28 UniRef50_Q3RAE9 Similar to nucleotide-binding protein containing... 122 2e-26 UniRef50_A4AGR7 Putative uncharacterized protein n=1 Tax=marine ... 113 1e-23 UniRef50_C3DUD8 Nucleotide-binding protein containing TIR-like d... 112 1e-23 UniRef50_B2FIX1 Putative uncharacterized protein n=1 Tax=Stenotr... 107 6e-22 UniRef50_C6N7T4 Putative uncharacterized protein n=1 Tax=Legione... 103 8e-21 UniRef50_Q24ZU3 Putative uncharacterized protein n=1 Tax=Desulfi... 100 5e-20 UniRef50_Q6AL85 Putative uncharacterized protein n=1 Tax=Desulfo... 100 1e-19 UniRef50_A3EJX2 SH3 domain protein n=2 Tax=Vibrionaceae RepID=A3... 96 1e-18 UniRef50_Q480E8 Conserved domain protein n=5 Tax=Gammaproteobact... 93 1e-17 UniRef50_C9PBW9 Putative uncharacterized protein n=2 Tax=Vibrio ... 92 2e-17 UniRef50_C5BHR5 Putative uncharacterized protein n=1 Tax=Teredin... 92 3e-17 UniRef50_B0PHL7 Putative uncharacterized protein n=1 Tax=Anaerot... 92 3e-17 UniRef50_Q8TKX7 Predicted protein n=1 Tax=Methanosarcina acetivo... 90 7e-17 UniRef50_C4ZIE6 Putative uncharacterized protein n=1 Tax=Thauera... 90 9e-17 UniRef50_B5JSV8 YebB n=4 Tax=Proteobacteria RepID=B5JSV8_9GAMM 89 1e-16 UniRef50_A4Z1J6 Putative uncharacterized protein n=2 Tax=Rhizobi... 88 4e-16 UniRef50_A3IZP6 Putative uncharacterized protein n=1 Tax=Cyanoth... 88 5e-16 UniRef50_C5CLS5 TPR repeat-containing protein n=1 Tax=Variovorax... 87 5e-16 UniRef50_Q212T3 Putative uncharacterized protein n=1 Tax=Rhodops... 87 8e-16 UniRef50_B1M988 Cyclic nucleotide-binding n=4 Tax=Proteobacteria... 85 3e-15 UniRef50_C7R666 Nucleotide-binding protein containing TIR-like d... 84 7e-15 UniRef50_C1F5N0 Cyclic nucleotide-binding domain protein n=2 Tax... 80 6e-14 UniRef50_C6W705 Nucleotide-binding protein containing TIR-like d... 78 3e-13 UniRef50_C6MH81 Nucleotide-binding protein containing TIR-like d... 77 6e-13 Sequences not found previously or not previously below threshold: UniRef50_B2IV30 Putative uncharacterized protein n=2 Tax=Bacteri... 87 1e-15 UniRef50_UPI0001BC92F3 hypothetical protein PsyrptA_06199 n=1 Ta... 85 3e-15 UniRef50_A3INK0 Putative uncharacterized protein n=1 Tax=Cyanoth... 82 3e-14 UniRef50_A4EPJ5 Putative uncharacterized protein n=1 Tax=Roseoba... 81 3e-14 UniRef50_C2LG65 Putative uncharacterized protein n=1 Tax=Proteus... 81 5e-14 UniRef50_A9A6G6 Tetratricopeptide domain protein n=1 Tax=Methano... 80 9e-14 UniRef50_B9TGA1 Putative uncharacterized protein n=1 Tax=Ricinus... 80 1e-13 UniRef50_A7G517 Conserved domain protein n=3 Tax=Clostridium bot... 76 1e-12 UniRef50_Q0AJT7 Putative uncharacterized protein n=1 Tax=Nitroso... 76 1e-12 UniRef50_Q7MKB6 Putative uncharacterized protein VV1889 n=1 Tax=... 75 4e-12 UniRef50_B3QDT6 Putative uncharacterized protein n=3 Tax=Rhodops... 75 4e-12 UniRef50_C7PYD3 Putative uncharacterized protein n=1 Tax=Catenul... 73 1e-11 UniRef50_Q9X882 Putative uncharacterized protein SCO3290 n=1 Tax... 73 1e-11 UniRef50_C6JHS1 Predicted protein n=1 Tax=Ruminococcus sp. 5_1_3... 73 1e-11 UniRef50_Q027G3 Nucleotide-binding protein n=1 Tax=Candidatus So... 71 4e-11 UniRef50_B7L3G5 Cyclic nucleotide-binding n=1 Tax=Methylobacteri... 70 1e-10 UniRef50_B1WT66 Putative uncharacterized protein n=1 Tax=Cyanoth... 69 2e-10 UniRef50_Q0YSC4 Putative uncharacterized protein n=1 Tax=Chlorob... 66 2e-09 UniRef50_A5KMN9 Putative uncharacterized protein n=1 Tax=Ruminoc... 65 3e-09 UniRef50_Q12DK8 Putative uncharacterized protein n=5 Tax=cellula... 64 7e-09 UniRef50_C7RC53 Putative uncharacterized protein n=1 Tax=Kangiel... 62 3e-08 UniRef50_C3DUD7 Putative uncharacterized protein n=1 Tax=Bacillu... 60 1e-07 UniRef50_Q54R22 Putative uncharacterized protein n=1 Tax=Dictyos... 55 3e-06 UniRef50_A0KZC7 Putative uncharacterized protein n=1 Tax=Shewane... 46 0.001 UniRef50_Q54KI8 Putative uncharacterized protein n=1 Tax=Dictyos... 44 0.005 UniRef50_B1KM00 TIR protein n=3 Tax=Proteobacteria RepID=B1KM00_... 44 0.007 UniRef50_C5V3F2 Putative uncharacterized protein n=1 Tax=Gallion... 43 0.015 UniRef50_Q2F9V3 Putative uncharacterized protein n=1 Tax=Vibrio ... 41 0.057 >UniRef50_Q9JMR6 Uncharacterized protein yuaY n=6 Tax=Enterobacteriaceae RepID=YUAY_ECOLI Length = 299 Score = 408 bits (1049), Expect = e-112, Method: Composition-based stats. Identities = 299/299 (100%), Positives = 299/299 (100%) Query: 1 MAIDIFQSLKNCVFDLQRADVQNYQQPLKQLARLLNSENLQSVNAHLTRNVELDTFLARS 60 MAIDIFQSLKNCVFDLQRADVQNYQQPLKQLARLLNSENLQSVNAHLTRNVELDTFLARS Sbjct: 1 MAIDIFQSLKNCVFDLQRADVQNYQQPLKQLARLLNSENLQSVNAHLTRNVELDTFLARS 60 Query: 61 EDTESSMAGSAVLQWPDEPADILGLKLLLIEKMADDNNFSFNFCHTFFYDRNIIESIRKF 120 EDTESSMAGSAVLQWPDEPADILGLKLLLIEKMADDNNFSFNFCHTFFYDRNIIESIRKF Sbjct: 61 EDTESSMAGSAVLQWPDEPADILGLKLLLIEKMADDNNFSFNFCHTFFYDRNIIESIRKF 120 Query: 121 TSSLVAPFVRDYQLYVENQHDPEPAVFRPVSRKIFIVHGHDNDALQSVARFISRIGLEEI 180 TSSLVAPFVRDYQLYVENQHDPEPAVFRPVSRKIFIVHGHDNDALQSVARFISRIGLEEI Sbjct: 121 TSSLVAPFVRDYQLYVENQHDPEPAVFRPVSRKIFIVHGHDNDALQSVARFISRIGLEEI 180 Query: 181 ILSERPDGSRTIIEKFEAESGDVSFAIVLMTPDDSGSALASESTRLRARQNVLYELGYFA 240 ILSERPDGSRTIIEKFEAESGDVSFAIVLMTPDDSGSALASESTRLRARQNVLYELGYFA Sbjct: 181 ILSERPDGSRTIIEKFEAESGDVSFAIVLMTPDDSGSALASESTRLRARQNVLYELGYFA 240 Query: 241 GKLGRGKVLVLRKGDIEIPSDLAGVLYTELDEHGGWKRKLLSELAYAGVPFDKDKALSA 299 GKLGRGKVLVLRKGDIEIPSDLAGVLYTELDEHGGWKRKLLSELAYAGVPFDKDKALSA Sbjct: 241 GKLGRGKVLVLRKGDIEIPSDLAGVLYTELDEHGGWKRKLLSELAYAGVPFDKDKALSA 299 >UniRef50_B0UF11 Nucleotide-binding protein-like protein containing TIR-like domain n=3 Tax=Proteobacteria RepID=B0UF11_METS4 Length = 301 Score = 384 bits (985), Expect = e-105, Method: Composition-based stats. Identities = 148/293 (50%), Positives = 199/293 (67%), Gaps = 1/293 (0%) Query: 4 DIFQSLKNCVFDLQRADVQNYQQPLKQLARLLNSENLQSVNAHLTRNVELDTFLARSEDT 63 D+F + N V DLQ A +Q +++PLK LARLL S +LQ +N LT V+ + F+A SE T Sbjct: 6 DVFTQINNAVLDLQGAHLQGFERPLKTLARLLQSPDLQDINRELTSGVDYEGFIAASEAT 65 Query: 64 ESSMAGSAVLQWPDEPADILGLKLLLIEKMADDNNFSFNFCHTFFYDRN-IIESIRKFTS 122 M GS L WP++ LGL L+LIEK+A + + NF H FFY N +I + Sbjct: 66 IGGMVGSGNLVWPEDQKQTLGLTLILIEKLAAEPGHALNFAHNFFYSGNKLIAGLHSLVG 125 Query: 123 SLVAPFVRDYQLYVENQHDPEPAVFRPVSRKIFIVHGHDNDALQSVARFISRIGLEEIIL 182 ++ PF RDY+ YV ++ D +P + + S K+FIVHGHD+ ALQ +ARFI ++GLE I+L Sbjct: 126 QVLIPFARDYKAYVLSRGDVQPRLVQAASNKVFIVHGHDDAALQGLARFIEKLGLEAIVL 185 Query: 183 SERPDGSRTIIEKFEAESGDVSFAIVLMTPDDSGSALASESTRLRARQNVLYELGYFAGK 242 E+PD RTIIEKFE + DV +A+VL+TPDD G A +E RARQNV++ELGYFAG+ Sbjct: 186 KEQPDQGRTIIEKFEQSATDVGYAVVLLTPDDMGGAKTTEEQDTRARQNVIFELGYFAGR 245 Query: 243 LGRGKVLVLRKGDIEIPSDLAGVLYTELDEHGGWKRKLLSELAYAGVPFDKDK 295 LGRG+V +L+KG IEIPSDL GV+YTE+D GWK +L+ EL A + FD + Sbjct: 246 LGRGRVCLLKKGRIEIPSDLFGVIYTEMDPSDGWKARLVGELKAAKLDFDANS 298 >UniRef50_UPI0001A454BD nucleotide-binding protein n=1 Tax=Neisseria subflava NJ9703 RepID=UPI0001A454BD Length = 301 Score = 366 bits (940), Expect = e-100, Method: Composition-based stats. Identities = 125/299 (41%), Positives = 176/299 (58%), Gaps = 6/299 (2%) Query: 1 MAIDIFQSLKNCVFDLQRADVQNYQQPLKQLARLLNSENLQSVNAHLTRNVELDTFLARS 60 M +DIF+ + N + DLQ +++Q ++ LK+L LLN E L+ N LT N+ L+ L S Sbjct: 1 MGLDIFEEINNAILDLQSSELQTFEWSLKRLNELLNDEVLKVHNDELTENLNLEKLLEDS 60 Query: 61 EDTESSMAGSAVLQWPDEPADILGLKLLLIEKMADDNNFSFNFCHTFFYDRN-IIESIRK 119 +T S GS+ L P + + LG +LL+ +++D N +FCH +FY N II I Sbjct: 61 SNTGGSFVGSSKLLLPTDMKERLGYIILLVNWLSNDTNEVLDFCHHYFYSGNKIIAGIHS 120 Query: 120 FTSSLVAPFVRDYQLYVENQH-DPEPAVFRPVSRKIFIVHGHDNDALQSVARFISRIGLE 178 F ++ PF RDY+ Y+ + + E VS +FIVHG D+ VAR I ++GL Sbjct: 121 FNRQVLIPFARDYKNYITRKGANMEVKSSSIVSNNVFIVHGRDDLLKVEVARLIEKLGLS 180 Query: 179 EIILSERPDGSRTIIEKFEAESGDVSFAIVLMTPDDSGSALASE---STRLRARQNVLYE 235 IIL E+P+ +TIIEK E + +V F IVL TP D G S + RARQNV++E Sbjct: 181 AIILHEQPNSGKTIIEKIEEYT-NVGFGIVLYTPCDIGGQKLSNLDTDLKPRARQNVVFE 239 Query: 236 LGYFAGKLGRGKVLVLRKGDIEIPSDLAGVLYTELDEHGGWKRKLLSELAYAGVPFDKD 294 GY GKLGR KV L K ++E PSD++GV+Y ++D+ GGWK KL EL AG D + Sbjct: 240 HGYLIGKLGRNKVCALVKEEVEFPSDISGVVYQKVDDAGGWKLKLAIELKQAGYSIDLN 298 >UniRef50_B3QLE0 Nucleotide-binding protein containing TIR-like protein domain-like protein n=1 Tax=Chlorobaculum parvum NCIB 8327 RepID=B3QLE0_CHLP8 Length = 286 Score = 271 bits (692), Expect = 3e-71, Method: Composition-based stats. Identities = 106/289 (36%), Positives = 156/289 (53%), Gaps = 23/289 (7%) Query: 25 QQPLKQLARLLNSENLQSVNAHLTRNV----ELDTFLARSEDTESSMAGSAVLQWPDEPA 80 +QPL++ L +E ++ A L + + E+D +ED +S + G +L+ Sbjct: 4 EQPLQRKPANLKAEQMKRGIARLEQRIAEFEEIDVNTIENED-DSPLEG-LILKANSTLQ 61 Query: 81 DILGLKLLLIEKMADDNNF-SFNFCHTF-FYDRNIIES-IRKFTSSLVAPFVRDYQLYVE 137 DILG + + D F S + H D +I+S I+K +S V +L+ E Sbjct: 62 DILGYDSI---EYFDYKLFESISISHFIPSADITLIKSLIQKELTSAVRQLKTLKELFEE 118 Query: 138 NQHDPEPAVFRPVSR--------KIFIVHGHDNDALQSVARFISRIGLEEIILSERPDGS 189 D E P ++ K+FIVHGHD+ ++VARFI ++GLE IIL E+P+ Sbjct: 119 RIADAEALPENPTAQSLSPINTGKVFIVHGHDHGVKETVARFIEKLGLEPIILHEQPNEG 178 Query: 190 RTIIEKFEAESGDVSFAIVLMTPDDSGS-ALASESTRLRARQNVLYELGYFAGKLGRGKV 248 +T+IEK E + FA+VL TPDD+G + + + RARQNV+ ELGYF +LGR +V Sbjct: 179 KTVIEKIERHAT-ADFAVVLFTPDDTGYPSKKPDDAKPRARQNVVLELGYFMARLGRNRV 237 Query: 249 LVL-RKGDIEIPSDLAGVLYTELDEHGGWKRKLLSELAYAGVPFDKDKA 296 +L DIEIPSD +GVLY D GGWK +L SE+ G+ D + Sbjct: 238 ALLQVGDDIEIPSDFSGVLYLTFDNGGGWKYQLASEMKARGMAIDMNNV 286 >UniRef50_D0LNL0 Nucleotide-binding protein, predicted, TIR-like protein n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LNL0_HALO1 Length = 596 Score = 211 bits (538), Expect = 2e-53, Method: Composition-based stats. Identities = 84/169 (49%), Positives = 110/169 (65%), Gaps = 1/169 (0%) Query: 129 VRDYQLYVENQHDPEPAVFRPVSRKIFIVHGHDNDALQSVARFISRIGLEEIILSERPDG 188 Q + K+F+VHGHD +SVARF+ ++G + +IL+ERPD Sbjct: 429 AEMLQKKEMRDLQMNSSGNAATRNKVFVVHGHDKGVRESVARFLEKLGFDAVILNERPDQ 488 Query: 189 SRTIIEKFEAESGDVSFAIVLMTPDDSGSALASESTRLRARQNVLYELGYFAGKLGRGKV 248 TIIEKFE ES V FAIVL+TPDD G + +S +LRARQNV++ELG+F GKLGRG+V Sbjct: 489 GATIIEKFERESKGVCFAIVLLTPDDVGGRIGDDS-QLRARQNVIFELGFFVGKLGRGRV 547 Query: 249 LVLRKGDIEIPSDLAGVLYTELDEHGGWKRKLLSELAYAGVPFDKDKAL 297 +LRKGD+E+ SD GV+Y E D+H GWK L E+ AG+P D +K L Sbjct: 548 ALLRKGDVEMLSDYHGVVYREHDDHDGWKSWLAGEMKSAGLPIDLNKIL 596 >UniRef50_Q0HFN8 Nucleotide-binding protein containing TIR-like domain-like n=2 Tax=Gammaproteobacteria RepID=Q0HFN8_SHESM Length = 313 Score = 209 bits (532), Expect = 8e-53, Method: Composition-based stats. Identities = 74/148 (50%), Positives = 95/148 (64%) Query: 146 VFRPVSRKIFIVHGHDNDALQSVARFISRIGLEEIILSERPDGSRTIIEKFEAESGDVSF 205 P+ +K+FIVHGHD + VARFIS++GLE IIL E+ GS+TIIEK E + V F Sbjct: 162 STPPMKKKVFIVHGHDELTKEKVARFISQVGLEPIILHEQVSGSQTIIEKIERYADQVCF 221 Query: 206 AIVLMTPDDSGSALASESTRLRARQNVLYELGYFAGKLGRGKVLVLRKGDIEIPSDLAGV 265 AIVL TP D G+ + + RARQNV++E GYF KLGR KV + KG+IE+P+D +GV Sbjct: 222 AIVLYTPCDRGAKASERTPMFRARQNVVFEHGYFIAKLGRSKVTAIVKGNIELPNDFSGV 281 Query: 266 LYTELDEHGGWKRKLLSELAYAGVPFDK 293 +Y DE WK L E+ AG D Sbjct: 282 VYVPFDESEAWKLSLAREMKGAGCEIDL 309 >UniRef50_B1B7E7 Putative uncharacterized protein n=1 Tax=Clostridium botulinum C str. Eklund RepID=B1B7E7_CLOBO Length = 258 Score = 207 bits (527), Expect = 3e-52, Method: Composition-based stats. Identities = 72/188 (38%), Positives = 111/188 (59%), Gaps = 4/188 (2%) Query: 108 FYDRNIIESIRKFTSSLVAPFVRDYQLYVENQHDPEPAVFRPVSRKIFIVHGHDNDALQS 167 ++R ++ + + +L+ F+ + L+ + + + ++ KIFIVHG DN A Sbjct: 71 SFNRAYVKGL-EVAQALLGAFIEELNLFDTKEDQCVCDLDKTINNKIFIVHGRDNLAKTE 129 Query: 168 VARFISRIGLEEIILSERPDGSRTIIEKFEAESGDVSFAIVLMTPDDSGSALA-SESTRL 226 VARF+ ++ L I+L+E+ + TIIEK E + DV FAIVL TP D G + + Sbjct: 130 VARFLEKLRLVPIVLNEQANEGTTIIEKLE-MNSDVGFAIVLYTPCDIGGLNDNTNNLMY 188 Query: 227 RARQNVLYELGYFAGKLGRGKVLVLRKGDIEIPSDLAGVLYTELDEHGGWKRKLLSELAY 286 RARQNV++E GY GK+GR + L KGDIE P+D++G++YT + E GWK +L +L Sbjct: 189 RARQNVVFEHGYLIGKIGRKNISALVKGDIETPNDISGIVYTSM-EGEGWKIQLAKDLKA 247 Query: 287 AGVPFDKD 294 AG D + Sbjct: 248 AGYNIDFN 255 >UniRef50_A4JRY7 Nucleotide-binding protein containing TIR-like domain-like n=3 Tax=Burkholderia RepID=A4JRY7_BURVG Length = 377 Score = 206 bits (524), Expect = 7e-52, Method: Composition-based stats. Identities = 101/296 (34%), Positives = 141/296 (47%), Gaps = 18/296 (6%) Query: 16 LQRADVQNYQQPLKQLARLLNSENLQSVNAHLTRNVELDTFLARSEDTESSMAGSAVLQW 75 L Q Q A L ++++ L ++ E M A L Sbjct: 88 LSEVGTQPSQPTTTMKAAHLQ-QDIERGITRLQERIDALKAFDFQTLKEGIMPELAALSA 146 Query: 76 P--DEPADILGLKLLLIEKM----ADDNNFSFNFCHTFFYDRNIIESIRKFTSSLVAPFV 129 D G + A ++ + FY R + +L+ Sbjct: 147 AIADTLERCFGKDTTAYRRYRAATALRPIQPKSYGNNEFYLRQEARENFDRSVALLQDAQ 206 Query: 130 RDYQLYVENQHDPEPAVFRP------VSRKIFIVHGHDNDALQSVARFISRIGLEEIILS 183 R E+ D E A +P +SR++F+VHGHD A ++VARF+ +I E IIL Sbjct: 207 R---ALREDLEDAEHAAPQPIVPAAALSRRVFVVHGHDEGAREAVARFLEKIDFEAIILH 263 Query: 184 ERPDGSRTIIEKFEAESGDVSFAIVLMTPDDSGSALASESTRLRARQNVLYELGYFAGKL 243 E+ + RT+IEK EA G+V FA+VL+TPDD GS + RARQNVL ELGYF G+L Sbjct: 264 EKANQGRTVIEKIEAH-GNVGFAVVLLTPDDVGSVK-DGTPEPRARQNVLLELGYFIGRL 321 Query: 244 GRGKVLVLRKGDIEIPSDLAGVLYTELDEHGGWKRKLLSELAYAGVPFDKDKALSA 299 GR +V L++G +EIPSD AGV++ +D GGWK+ L EL G D KA+ A Sbjct: 322 GRDRVCALKRGQLEIPSDFAGVVWEAMDTAGGWKKSLCRELDAMGFAIDWKKAMQA 377 >UniRef50_B1ZZI8 Nucleotide-binding protein containing TIR-like protein domain-like protein n=1 Tax=Opitutus terrae PB90-1 RepID=B1ZZI8_OPITP Length = 268 Score = 205 bits (521), Expect = 2e-51, Method: Composition-based stats. Identities = 74/167 (44%), Positives = 103/167 (61%), Gaps = 2/167 (1%) Query: 134 LYVENQHDPEPAVFR-PVSRKIFIVHGHDNDALQSVARFISRIGLEEIILSERPDGSRTI 192 + + DP P + +F+VHGHD A +VARF+ ++G+ +IL E+ + T+ Sbjct: 102 AFNAKRFDPGAINTELPKANSVFLVHGHDEGAKHAVARFLEQLGITPVILQEQVNRGMTV 161 Query: 193 IEKFEAESGDVSFAIVLMTPDDSGSALASE-STRLRARQNVLYELGYFAGKLGRGKVLVL 251 IEKFE + FA+VLMTPDD G A E + R RQNV+ ELGYFA KLGR + LV+ Sbjct: 162 IEKFEEFASRAGFAVVLMTPDDIGYAANHEGDKKPRPRQNVILELGYFAAKLGRRRTLVI 221 Query: 252 RKGDIEIPSDLAGVLYTELDEHGGWKRKLLSELAYAGVPFDKDKALS 298 KG++E+PSD+ G+LY +D GWK L EL AG D ++AL+ Sbjct: 222 TKGELEMPSDVFGLLYEPMDSSHGWKMVLAQELKSAGFTIDLNRALN 268 >UniRef50_Q21MV2 Nucleotide-binding protein containing TIR-like protein domain-like protein n=2 Tax=Bacteria RepID=Q21MV2_SACD2 Length = 287 Score = 204 bits (520), Expect = 3e-51, Method: Composition-based stats. Identities = 84/186 (45%), Positives = 113/186 (60%), Gaps = 13/186 (6%) Query: 125 VAPFVRDYQLYVEN-QHDPEPAVFRPVSRK-----------IFIVHGHDNDALQSVARFI 172 + + + +E + PEP+ S+K +FIVHGHD+ A +VARF+ Sbjct: 102 IGKQITSLESILERLELIPEPSSTASFSQKATKTSSGDLSSVFIVHGHDDAAKVTVARFV 161 Query: 173 SRIGLEEIILSERPDGSRTIIEKFEAESGDVSFAIVLMTPDDSGSALAS-ESTRLRARQN 231 ++GL+ IIL E+PD +TIIEKFE+ + +V FAIVL+TPDD S+ A+ E T RARQN Sbjct: 162 EKLGLKAIILHEQPDKGQTIIEKFESNASNVGFAIVLLTPDDIASSKATPEDTMPRARQN 221 Query: 232 VLYELGYFAGKLGRGKVLVLRKGDIEIPSDLAGVLYTELDEHGGWKRKLLSELAYAGVPF 291 V+ ELGYF G LGR KV VL K ++EIPSD GV+Y W KL E+ AG+ Sbjct: 222 VVLELGYFCGSLGRDKVCVLYKDEVEIPSDYLGVIYMPFGSGDSWHFKLAREMKSAGLDI 281 Query: 292 DKDKAL 297 D + AL Sbjct: 282 DLNSAL 287 >UniRef50_B1KWG1 YebB n=1 Tax=Clostridium botulinum A3 str. Loch Maree RepID=B1KWG1_CLOBM Length = 260 Score = 202 bits (515), Expect = 8e-51, Method: Composition-based stats. Identities = 81/221 (36%), Positives = 116/221 (52%), Gaps = 8/221 (3%) Query: 81 DILGLKLLLIEKMADDNNFSFNFCHTFFYDRNI-IESIRKFTSSL--VAPFVRDYQLYVE 137 D + L +++ +N + F YD+ I I+ R+ S L + F+ + ++ Sbjct: 44 DEIRYFLFKLKEWYRENQREIQ-SNDFVYDKEIHIKLEREIGSYLDEINRFIEENTSIIQ 102 Query: 138 NQHDPEPAVFRPVSRKIFIVHGHDNDALQSVARFISRIGLEEIILSERPDGSRTIIEKFE 197 + E KIFIVHGHD AL+ V FI I LE I+L + + TIIEK E Sbjct: 103 EKETNESVEIN--RNKIFIVHGHDELALEQVINFIKDIRLEPIVLKNQANLGNTIIEKIE 160 Query: 198 AESGDVSFAIVLMTPDDSG-SALASESTRLRARQNVLYELGYFAGKLGRGKVLVLRKGDI 256 S DV FAIVL TP D G S ++ RARQNV++E GY GKLGR V L KGD+ Sbjct: 161 EYS-DVGFAIVLYTPCDIGASTKDKDTVNKRARQNVVFEHGYLMGKLGRKNVCALVKGDV 219 Query: 257 EIPSDLAGVLYTELDEHGGWKRKLLSELAYAGVPFDKDKAL 297 E P+D++G++Y ELD W+ + ++ G D + + Sbjct: 220 EKPNDISGLVYVELDNQKAWRFNIARDMKKLGYDIDLNNLI 260 >UniRef50_C0PW38 Putative uncharacterized protein n=3 Tax=Salmonella enterica RepID=C0PW38_SALPC Length = 279 Score = 201 bits (511), Expect = 2e-50, Method: Composition-based stats. Identities = 70/157 (44%), Positives = 100/157 (63%), Gaps = 2/157 (1%) Query: 142 PEPAVFRPVSRKIFIVHGHDNDALQSVARFISRIGLEEIILSERPDGSRTIIEKFEAESG 201 P + S K+FIVHGHD+ A ARF+ ++ + IIL E+ RTIIEK E + Sbjct: 124 PNKSTTNTKSDKVFIVHGHDDAAKIKTARFVEQLDYKAIILHEQASSGRTIIEKIEQFT- 182 Query: 202 DVSFAIVLMTPDDSGSALAS-ESTRLRARQNVLYELGYFAGKLGRGKVLVLRKGDIEIPS 260 DV FA+VL TPDD G+A + + +LRARQNV++E G+ GKLGR +V+ L G IE+P+ Sbjct: 183 DVGFAVVLYTPDDIGNAKDNADDLQLRARQNVVFEHGFLIGKLGRDRVVALVDGAIELPN 242 Query: 261 DLAGVLYTELDEHGGWKRKLLSELAYAGVPFDKDKAL 297 D++GV+Y ++DE W +L E+ AG D +K + Sbjct: 243 DISGVVYIKMDEANAWHLQLAKEMKQAGFNIDMNKLV 279 >UniRef50_A5EGX1 Putative uncharacterized protein n=1 Tax=Bradyrhizobium sp. BTAi1 RepID=A5EGX1_BRASB Length = 291 Score = 200 bits (509), Expect = 4e-50, Method: Composition-based stats. Identities = 67/170 (39%), Positives = 96/170 (56%), Gaps = 1/170 (0%) Query: 130 RDYQLYVENQHDPEPAVFRPVSRKIFIVHGHDNDALQSVARFISRIGLEEIILSERPDGS 189 +D + + P S KIF+VHG D A VA F+ +GL+ IIL RP+ Sbjct: 123 KDIESMIPEDAQPVTLEPAAASNKIFLVHGRDEAAKNEVALFLRNLGLDPIILHLRPNSG 182 Query: 190 RTIIEKFEAESGDVSFAIVLMTPDDSGSALASESTRLRARQNVLYELGYFAGKLGRGKVL 249 R ++ KF E+ +FA++LMTPDD G ++ + RARQNV++ELG+F GKLG V Sbjct: 183 RHLLTKFREEADGANFAVILMTPDDVGGIAGAD-VQPRARQNVVFELGFFIGKLGPAHVA 241 Query: 250 VLRKGDIEIPSDLAGVLYTELDEHGGWKRKLLSELAYAGVPFDKDKALSA 299 L K ++E PSD G+ Y + WK +L E+ +A +PFD L+A Sbjct: 242 ALLKSNVEKPSDFDGIAYISYGQGTSWKTELAREMHHARIPFDASAVLTA 291 >UniRef50_A4C149 Putative nucleotide-binding protein containing TIR-like domain n=1 Tax=Polaribacter irgensii 23-P RepID=A4C149_9FLAO Length = 255 Score = 197 bits (501), Expect = 4e-49, Method: Composition-based stats. Identities = 77/249 (30%), Positives = 112/249 (44%), Gaps = 28/249 (11%) Query: 50 NVELDTFLARSEDTESSMAGSAVLQWPDEPADILGLKLLLIEKMADDNNFSFNFCHTFFY 109 VE+ +++A ED S G W + N H + Sbjct: 34 GVEMQSWVAECEDFILSNYGKNSAPW---------------RIFERFDIRHLNDYHAHEF 78 Query: 110 DRNIIESIRKFTSSLVAPFVRDYQLYVENQHDPEPAVFRPVSRKIFIVHGHDNDALQSVA 169 + + + T+ L + + D K+FIVHGHD+ VA Sbjct: 79 ELEKTKLVSALTACLRITPKEKKKQIATQELDLT---------KVFIVHGHDDLLKNEVA 129 Query: 170 RFISRIGLEEIILSERPDGSRTIIEKFEAESGDVSFAIVLMTPDDSGSALASE-STRLRA 228 RFI ++GL+ IIL E+ TIIEK E S +V F IVL TP D G+ + + RA Sbjct: 130 RFIEKLGLKAIILHEQASSGNTIIEKIEENS-NVGFGIVLYTPCDIGTKKEENPNMQPRA 188 Query: 229 RQNVLYELGYFAGKLGRGKVLVLRKGDIEIPSDLAGVLYTELDEHGGWKRKLLSELAYAG 288 RQNV++E GY GK+GR V L KG++E P+D++GV+Y W+ L EL +G Sbjct: 189 RQNVVFEHGYLIGKIGRRNVCALVKGNVEKPNDISGVVYVS--TQEEWRLSLAKELRNSG 246 Query: 289 VPFDKDKAL 297 D + + Sbjct: 247 YDIDMNLVI 255 >UniRef50_UPI0001C33D0E hypothetical protein CATC2_14735 n=1 Tax=Citrobacter youngae ATCC 29220 RepID=UPI0001C33D0E Length = 270 Score = 196 bits (497), Expect = 1e-48, Method: Composition-based stats. Identities = 71/170 (41%), Positives = 101/170 (59%), Gaps = 7/170 (4%) Query: 131 DYQLYVENQHDPEPAVFRPVSRKIFIVHGHDNDALQSVARFISRIGLEEIILSERPDGSR 190 +Y L E + + + K+FI+HGHD +A + ARFI ++GLE IILSE+ + + Sbjct: 105 EYSLPNETSDNQDKGNSLLANNKVFIIHGHDGEAKEKTARFIEKLGLEAIILSEQANQGK 164 Query: 191 TIIEKFEAESGDVSFAIVLMTPDDSGSALASE---STRLRARQNVLYELGYFAGKLGRGK 247 TIIEK E + DV FAIVL T DD+G+ A + RARQNV++E G G+LGR K Sbjct: 165 TIIEKLEHYT-DVGFAIVLYTGDDAGNTEAEAGIGNLNARARQNVVFEHGLLMGRLGRHK 223 Query: 248 VLVLRKGDIEIPSDLAGVLYTELDEHGGWKRKLLSELAYAGVPFDKDKAL 297 V+ L G +E+PSD+ GV+Y W+ ++ E+ AG D +K L Sbjct: 224 VIPLVSGTLELPSDIQGVVYI---NDRNWQLEVAREIKAAGYDIDMNKVL 270 >UniRef50_B0UTQ9 Putative nucleotide-binding protein containing TIR-like domain n=3 Tax=Bacteria RepID=B0UTQ9_HAES2 Length = 279 Score = 194 bits (494), Expect = 2e-48, Method: Composition-based stats. Identities = 68/144 (47%), Positives = 88/144 (61%), Gaps = 2/144 (1%) Query: 152 RKIFIVHGHDNDALQSVARFISRIGLEEIILSERPDGSRTIIEKFEAESGDVSFAIVLMT 211 K+FIVHG DN+ Q VARFI ++G E IIL E+ TIIEK E + +V F IVL T Sbjct: 134 NKVFIVHGRDNETKQEVARFIEKMGFEPIILHEQSSLGMTIIEKIEKYT-NVGFGIVLYT 192 Query: 212 PDDSGSALAS-ESTRLRARQNVLYELGYFAGKLGRGKVLVLRKGDIEIPSDLAGVLYTEL 270 P D G S + + RARQNV++E G+ KLGR V L K DIE P+D++GV+Y Sbjct: 193 PCDKGYEKDSPKEIKSRARQNVVFEHGFLISKLGRNNVCALVKDDIEKPNDISGVVYITF 252 Query: 271 DEHGGWKRKLLSELAYAGVPFDKD 294 D +GGWK L E+ +G D + Sbjct: 253 DSNGGWKIPLAKEMKSSGYEVDFN 276 >UniRef50_Q6D353 Putative uncharacterized protein n=2 Tax=Gammaproteobacteria RepID=Q6D353_ERWCT Length = 270 Score = 192 bits (488), Expect = 1e-47, Method: Composition-based stats. Identities = 67/161 (41%), Positives = 90/161 (55%), Gaps = 1/161 (0%) Query: 133 QLYVENQHDPEPAVFRPVSRKIFIVHGHDNDALQSVARFISRIGLEEIILSERPDGSRTI 192 Q + + RK+FIVHG +N+ Q V+RFIS +GLE IIL E+ + TI Sbjct: 107 QRFNDRNPVLNSLPITRNKRKVFIVHGRNNEVKQEVSRFISDLGLEPIILHEQANVGMTI 166 Query: 193 IEKFEAESGDVSFAIVLMTPDDSGSALASEST-RLRARQNVLYELGYFAGKLGRGKVLVL 251 IEK E + D FA+VL T D G + + RARQNV++E GY KLGR V L Sbjct: 167 IEKIERYTNDADFALVLYTACDLGRGGDEPNPPKFRARQNVVFEHGYLMAKLGRENVCAL 226 Query: 252 RKGDIEIPSDLAGVLYTELDEHGGWKRKLLSELAYAGVPFD 292 K +IE P+D++GV+Y LD +G WK + EL G + Sbjct: 227 VKDNIETPNDISGVVYVPLDNYGAWKMSVSKELKTCGYSIN 267 >UniRef50_Q4C066 Similar to nucleotide-binding protein containing TIR-like domain n=1 Tax=Crocosphaera watsonii WH 8501 RepID=Q4C066_CROWT Length = 285 Score = 191 bits (484), Expect = 3e-47, Method: Composition-based stats. Identities = 74/145 (51%), Positives = 97/145 (66%), Gaps = 2/145 (1%) Query: 152 RKIFIVHGHDNDALQSVARFISRIGLEEIILSERPDGSRTIIEKFEAESGDVSFAIVLMT 211 + IFIVHGHDN+A + V F+ ++ IIL E+ + +TIIEKFE S DVSFAI+L+T Sbjct: 140 KDIFIVHGHDNEAKREVDVFLRKLDFNPIILHEQTNEGKTIIEKFENYS-DVSFAIILLT 198 Query: 212 PDDSGSAL-ASESTRLRARQNVLYELGYFAGKLGRGKVLVLRKGDIEIPSDLAGVLYTEL 270 PDD G E + RARQNV+ ELGYF GKLGR KV L K +EIPSD +G+LYT++ Sbjct: 199 PDDEGRVRNKDEELKPRARQNVILELGYFMGKLGRDKVCALYKEKVEIPSDYSGILYTKM 258 Query: 271 DEHGGWKRKLLSELAYAGVPFDKDK 295 D GW K+ E+ +G+ D +K Sbjct: 259 DNDSGWHMKIAREIKKSGLDVDLNK 283 >UniRef50_A4CFM1 Predicted nucleotide-binding protein n=2 Tax=Gammaproteobacteria RepID=A4CFM1_9GAMM Length = 305 Score = 188 bits (477), Expect = 2e-46, Method: Composition-based stats. Identities = 63/141 (44%), Positives = 91/141 (64%), Gaps = 1/141 (0%) Query: 151 SRKIFIVHGHDNDALQSVARFISRIGLEEIILSERPDGSRTIIEKFEAESGDVSFAIVLM 210 + ++FIVHGHD+ A ++ FIS +GL+ IIL ++ RTIIEK E S +V F +VL Sbjct: 166 TSQVFIVHGHDDIAKLEMSSFISSLGLQPIILHQQASSGRTIIEKIEHYS-NVGFGVVLY 224 Query: 211 TPDDSGSALASESTRLRARQNVLYELGYFAGKLGRGKVLVLRKGDIEIPSDLAGVLYTEL 270 TP D GS + RARQNV++E G+ GKL R +V + KG++E P+D++GV+Y + Sbjct: 225 TPCDIGSKAGELTGNYRARQNVVFEHGFLIGKLSRSRVSAVVKGNVETPNDISGVVYVTM 284 Query: 271 DEHGGWKRKLLSELAYAGVPF 291 D+ G WK++L EL AG Sbjct: 285 DQEGQWKQQLSVELRGAGYHV 305 >UniRef50_A1SX31 Putative nucleotide-binding protein containing TIR-like domain n=1 Tax=Psychromonas ingrahamii 37 RepID=A1SX31_PSYIN Length = 291 Score = 187 bits (474), Expect = 5e-46, Method: Composition-based stats. Identities = 79/210 (37%), Positives = 111/210 (52%), Gaps = 15/210 (7%) Query: 89 LIEKMADDNNFSFNFCHTFFYDRNIIESIRKFTSSLVAPFVRDYQLYVENQHDPEPAVFR 148 L EK D + CH +IIE + + P R+ Q+D V Sbjct: 96 LGEKRNDFTVKVEDKCHRL---ESIIERLE------LIPESRELISVNSIQNDKSKNVNY 146 Query: 149 PVSRKIFIVHGHDNDALQSVARFISRIGLEEIILSERPDGSRTIIEKFEAESGDVSFAIV 208 +IFIVHGHD+ A VARFI ++G E II+ E+P+ S+TIIEK EA S +V F +V Sbjct: 147 ---SQIFIVHGHDDSAKLEVARFIEKLGFEPIIIHEQPNASKTIIEKIEAFS-NVGFGVV 202 Query: 209 LMTPDDSGSALASE-STRLRARQNVLYELGYFAGKLGRGKVLVLRKGDIEIPSDLAGVLY 267 + +P D G RARQNV++E G+ GKLGR KV L G++E P+D++G++Y Sbjct: 203 IYSPCDIGGKNKDNPELAGRARQNVVFEHGFLIGKLGRSKVCPLVTGNVETPNDISGIVY 262 Query: 268 TELDEHGGWKRKLLSELAYAGVPFDKDKAL 297 T +D W+ L EL A D + + Sbjct: 263 TSMD-TSNWQIALAKELRTADYAVDMNDVI 291 >UniRef50_A1ZY85 Putative uncharacterized protein n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZY85_9SPHI Length = 283 Score = 187 bits (474), Expect = 5e-46, Method: Composition-based stats. Identities = 73/170 (42%), Positives = 106/170 (62%), Gaps = 5/170 (2%) Query: 130 RDYQLYVENQHDPEPAVFRPV--SRKIFIVHGHDNDALQSVARFISRIGLEEIILSERPD 187 + + +++ Q + ++ + K+FIVHGHD VARF+ ++ L IIL E+ D Sbjct: 115 EECEEFIKEQTPAKASINKAKLDKTKVFIVHGHDQATKNEVARFLEKLDLTPIILHEQTD 174 Query: 188 GSRTIIEKFEAESGDVSFAIVLMTPDDSGSALAS-ESTRLRARQNVLYELGYFAGKLGRG 246 G +TIIEK E S DV ++IVL TP D G + + + RARQNV++E G+ GKLGR Sbjct: 175 GGKTIIEKIEKYS-DVGYSIVLYTPCDEGYKKGNPDDLKNRARQNVVFEHGFLIGKLGRK 233 Query: 247 KVLVLRKGDIEIPSDLAGVLYTELDEHGGWKRKLLSELAYAGVPFDKDKA 296 V L KGDIEIP+D++G++YT++D+ WK K+L EL AG D +K Sbjct: 234 HVSTLIKGDIEIPNDISGLVYTKIDD-SSWKFKVLDELKNAGYDIDANKI 282 >UniRef50_B8EAL8 Putative uncharacterized protein n=1 Tax=Shewanella baltica OS223 RepID=B8EAL8_SHEB2 Length = 268 Score = 184 bits (466), Expect = 4e-45, Method: Composition-based stats. Identities = 64/155 (41%), Positives = 89/155 (57%), Gaps = 7/155 (4%) Query: 144 PAVFRPVSRKIFIVHGHDNDALQSVARFISRIGLEEIILSERPDGSRT-IIEKFEAESGD 202 A + S+ +FIVHGH+N+ + ARFI ++G E IIL E+ G T IIEK + Sbjct: 116 KASPKEKSKNVFIVHGHNNEVKERTARFIQKLGFEPIILHEQASGGSTTIIEKILEYAKT 175 Query: 203 VSFAIVLMTPDDSGSALASEST--RLRARQNVLYELGYFAGKLGRGKVLVLRKGDIEIPS 260 FAIVL T DD G +E + + RARQNV++E G G LGR V+ L +IEIP+ Sbjct: 176 TDFAIVLYTADDVGGIKNTEPSVLKPRARQNVVFEHGLLIGLLGRENVVPLVADNIEIPN 235 Query: 261 DLAGVLYTELDEHGGWKRKLLSELAYAGVPFDKDK 295 D++GV+Y D W+ + E+ AG D +K Sbjct: 236 DISGVVYVRND----WQTAIAKEMKKAGYEIDFNK 266 >UniRef50_A6AKB0 YebB n=1 Tax=Vibrio harveyi HY01 RepID=A6AKB0_VIBHA Length = 269 Score = 182 bits (463), Expect = 1e-44, Method: Composition-based stats. Identities = 67/146 (45%), Positives = 97/146 (66%), Gaps = 5/146 (3%) Query: 151 SRKIFIVHGHDNDALQSVARFISRIGLEEIILSERPDGSRTIIEKFEAESGDVSFAIVLM 210 ++K+FIVHG +N+ VARFI ++G E I+L E+ G +TIIEK E+ + DV FA+VL Sbjct: 125 NQKVFIVHGRENETKIEVARFIEKLGFEAIVLHEQASGGKTIIEKIESYT-DVGFAVVLY 183 Query: 211 TPDDSGS-ALASESTRLRARQNVLYELGYFAGKLGRGKVLVLRKGDIEIPSDLAGVLYTE 269 TPDD G+ A + + RARQNV++E GY K+GR +V L KG+IE+P+D++GV+Y Sbjct: 184 TPDDVGALAAEQQDLKNRARQNVVFEHGYLMAKIGRDRVAPLVKGNIELPNDISGVVYVS 243 Query: 270 LDEHGGWKRKLLSELAYAGVPFDKDK 295 + W+ L EL+ AG D +K Sbjct: 244 ---NENWQVDLAKELSSAGYNVDFNK 266 >UniRef50_Q8D9V5 Predicted nucleotide-binding protein n=1 Tax=Vibrio vulnificus RepID=Q8D9V5_VIBVU Length = 299 Score = 181 bits (460), Expect = 2e-44, Method: Composition-based stats. Identities = 65/155 (41%), Positives = 88/155 (56%), Gaps = 1/155 (0%) Query: 137 ENQHDPEPAVFRPVSRKIFIVHGHDNDALQSVARFISRIGLEEIILSERPDGSRTIIEKF 196 E ++ P ++FIVHGHD A V ++ GLE IIL + G RTIIEK Sbjct: 143 EAENLPPEDGSSFNKNQVFIVHGHDEHAKNDVKAYVESKGLEPIILHLQASGGRTIIEKI 202 Query: 197 EAESGDVSFAIVLMTPDDSGSALASESTRLRARQNVLYELGYFAGKLGRGKVLVLRKGDI 256 + S +V F IVL T D G+ + S + RARQNV++E GY KL R +V L KG + Sbjct: 203 DHYS-NVGFGIVLYTECDLGAKRDTLSFKWRARQNVVFEHGYLIAKLSRERVAALVKGSV 261 Query: 257 EIPSDLAGVLYTELDEHGGWKRKLLSELAYAGVPF 291 E P+D++GV+Y +D G WK +L +EL AG Sbjct: 262 ETPNDISGVVYVSMDAAGTWKDELDAELRNAGYEI 296 >UniRef50_Q8EDI5 Putative uncharacterized protein n=1 Tax=Shewanella oneidensis RepID=Q8EDI5_SHEON Length = 271 Score = 180 bits (456), Expect = 5e-44, Method: Composition-based stats. Identities = 63/192 (32%), Positives = 89/192 (46%), Gaps = 7/192 (3%) Query: 105 HTFFYDRNIIESIRKFTSSLVAPFVRDYQ-LYVENQHDPEPAVFRPVSRKIFIVHGHDND 163 H FF+ + S ++ DY + + + S+K+ IVHGHD Sbjct: 79 HDFFWKTDGSAMNAYLESLILDIQNDDYDFTPINKEVQDVKTIPEAKSKKVLIVHGHDEA 138 Query: 164 ALQSVARFISRIGLEEIILSERPDGSRTIIEKFEAESGDVSFAIVLMTPDDSGSAL---A 220 A F+ + G + IIL TII+K E + V + IVL TPDD G Sbjct: 139 AKYRTEAFLRKHGFDPIILHLNASKGDTIIKKLERLAEGVGYGIVLYTPDDMGETKVKAV 198 Query: 221 SESTRLRARQNVLYELGYFAGKLGRGKVLVLRKGDIEIPSDLAGVLYTELDEHGGWKRKL 280 + RARQNV++E GY G +GR V + +G +E PSD+ GV+Y W+ L Sbjct: 199 QHELQPRARQNVVFEHGYLMGLIGRPNVAAIVEGYVEKPSDIDGVVYIP---SSNWEIDL 255 Query: 281 LSELAYAGVPFD 292 L EL AG P + Sbjct: 256 LRELHEAGYPIN 267 >UniRef50_Q0YR18 Nucleotide-binding protein containing TIR-like domain-like n=1 Tax=Chlorobium ferrooxidans DSM 13031 RepID=Q0YR18_9CHLB Length = 261 Score = 180 bits (456), Expect = 7e-44, Method: Composition-based stats. Identities = 59/145 (40%), Positives = 87/145 (60%), Gaps = 1/145 (0%) Query: 151 SRKIFIVHGHDNDALQSVARFISRIGLEEIILSERPDGSRTIIEKFEAESGDVSFAIVLM 210 + +F+VHG ++ A V+ ++ ++GL+ IIL E+ + +TIIEKFE + +V AIVL Sbjct: 117 TPDVFVVHGRNDGAKAQVSSYLLKLGLKPIILHEQLNQGQTIIEKFEKHA-NVKAAIVLF 175 Query: 211 TPDDSGSALASESTRLRARQNVLYELGYFAGKLGRGKVLVLRKGDIEIPSDLAGVLYTEL 270 T DD G E +RARQNV++E GYF GK+GR ++L ++IPSDL G + EL Sbjct: 176 TDDDLGKYRDDEVLEVRARQNVVFEAGYFIGKIGRQNTIILLSSGLKIPSDLQGYVNFEL 235 Query: 271 DEHGGWKRKLLSELAYAGVPFDKDK 295 D+ W + EL G D +K Sbjct: 236 DDRQRWHIDVAKELKGIGFNIDMNK 260 >UniRef50_D1VA94 Putative uncharacterized protein n=1 Tax=Frankia sp. EuI1c RepID=D1VA94_9ACTO Length = 167 Score = 179 bits (454), Expect = 9e-44, Method: Composition-based stats. Identities = 68/158 (43%), Positives = 95/158 (60%), Gaps = 4/158 (2%) Query: 144 PAVFRP---VSRKIFIVHGHDNDALQSVARFISR-IGLEEIILSERPDGSRTIIEKFEAE 199 P+V P V R IF+VHG DN A V R + + LE I+L+++P+ +TIIEK E Sbjct: 9 PSVSAPAAVVPRAIFLVHGRDNAARLQVQRVLEKATPLEVIVLADQPNSGQTIIEKLEGH 68 Query: 200 SGDVSFAIVLMTPDDSGSALASESTRLRARQNVLYELGYFAGKLGRGKVLVLRKGDIEIP 259 + +FA++LMT DD G S + RARQNV+ ELGY A KLGR V +L + +E+P Sbjct: 69 FENSAFAVILMTADDEGRLKGSADLQSRARQNVILELGYAAAKLGRRNVAILFEDGVEMP 128 Query: 260 SDLAGVLYTELDEHGGWKRKLLSELAYAGVPFDKDKAL 297 SD GV T D GW ++L+E+ AG+ D +K + Sbjct: 129 SDFHGVGRTLFDSGNGWILEILAEMKVAGIEADLNKLM 166 >UniRef50_A1ZY86 Putative uncharacterized protein n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZY86_9SPHI Length = 283 Score = 179 bits (453), Expect = 1e-43, Method: Composition-based stats. Identities = 69/183 (37%), Positives = 103/183 (56%), Gaps = 5/183 (2%) Query: 117 IRKFTSSLVAPFVRDYQLYVENQHDPEPAVFRPVSRKIFIVHGHDNDALQSVARFISRIG 176 ++ TS ++ + D P + ++FIVHGHD+ VARFI + Sbjct: 103 VQDITSQVIKECKSEISQ-ETQPPDKTPQRNGFDNTEVFIVHGHDDSKTDKVARFIQTLS 161 Query: 177 LEEIILSERPDGSRTIIEKFEAESGDVSFAIVLMTPDDSGSALASE-STRLRARQNVLYE 235 L IILSE+ G +TII+K ++ S +V + IVL TP D GS + E + RARQNV++E Sbjct: 162 LVPIILSEQASGGQTIIDKLDSNS-NVGYGIVLYTPCDQGSKIGDEKDAKKRARQNVVFE 220 Query: 236 LGYFAGKLGRGKVLVLR-KGDIEIPSDLAGVLYTELDEHGGWKRKLLSELAYAGVPFDKD 294 G+ GKLGR +V VL +IE P+D++GVLY ++ + GW+ + EL AG D + Sbjct: 221 HGFLIGKLGRSRVCVLITDEEIEKPNDISGVLYIKMHD-SGWQLSVAKELNKAGYDVDAN 279 Query: 295 KAL 297 + Sbjct: 280 SLI 282 >UniRef50_Q1NBU8 Putative uncharacterized protein n=1 Tax=Sphingomonas sp. SKA58 RepID=Q1NBU8_9SPHN Length = 315 Score = 177 bits (449), Expect = 4e-43, Method: Composition-based stats. Identities = 66/151 (43%), Positives = 94/151 (62%), Gaps = 9/151 (5%) Query: 150 VSRKIFIVHGHDNDALQSVARFIS-RIGLEEIILSERPDGSRTIIEKFEAESGDVSFAIV 208 V K+F+VHG D A +VARF+ R+GL IILSERP+ R+I+ KF+ E+ ++A++ Sbjct: 157 VPAKVFLVHGRDEAAKHAVARFLETRVGLGVIILSERPNQGRSILTKFQEEADGAAYAVI 216 Query: 209 LMTPDDSGSAL--------ASESTRLRARQNVLYELGYFAGKLGRGKVLVLRKGDIEIPS 260 LMTPDD G A R RQNV++E+G+F G+LG +V L ++E PS Sbjct: 217 LMTPDDLGQLRPGLLPAGVAPADPAPRPRQNVIFEMGFFIGQLGADRVCALVPPNVERPS 276 Query: 261 DLAGVLYTELDEHGGWKRKLLSELAYAGVPF 291 D G++Y D+ GW+RKL++EL A VP Sbjct: 277 DYDGIVYVPFDDQEGWQRKLVTELHAANVPV 307 >UniRef50_Q120Z2 Putative uncharacterized protein n=1 Tax=Polaromonas sp. JS666 RepID=Q120Z2_POLSJ Length = 256 Score = 177 bits (448), Expect = 6e-43, Method: Composition-based stats. Identities = 36/155 (23%), Positives = 69/155 (44%), Gaps = 10/155 (6%) Query: 6 FQSLKNCVFDLQRADVQNYQQPLKQLARLLNSENLQSVNAHLTRNVELDTFLARSEDTES 65 + L V D + Q+ + L++ L+ E L + + D +LA++++T Sbjct: 15 LRDLDETVSDFRDTSFQSSESVLQRFVHHLDEEPLAGFLKAVLPVPDFDGWLAKAQNTIG 74 Query: 66 SMAGSAVLQWPDEPADILGLKLLLIEKMADDNNFSFNFCHTFFYD-RNIIESIRKFTSSL 124 SM GS L+WP ++ + +++ L + + +F H F Y R++ + F + L Sbjct: 75 SMVGSGTLEWPPSRSERVAMQVALCRAILNKTVRFLDFVHNFMYTGRDVARHVDDFATKL 134 Query: 125 VAPFVRDYQLYVENQHDPEPAVFRPVSRKIFIVHG 159 + P +RD E+ RP+S +F G Sbjct: 135 LNPLMRDIARLTES---------RPLSPVLFEAMG 160 >UniRef50_B4S624 Nucleotide-binding protein containing TIR-like protein domain-like protein n=1 Tax=Prosthecochloris aestuarii DSM 271 RepID=B4S624_PROA2 Length = 507 Score = 171 bits (433), Expect = 3e-41, Method: Composition-based stats. Identities = 65/147 (44%), Positives = 105/147 (71%), Gaps = 2/147 (1%) Query: 151 SRKIFIVHGHDNDALQSVARFISRIGLEEIILSERPDGSRTIIEKFEAESGDVSFAIVLM 210 ++K+F+VHGH+ DA ++ +++ + LE I ++++P +TII+KF + + DV+FAIVL+ Sbjct: 360 TKKVFVVHGHNVDARDAIEKYLEDLDLEPITIAKQPHEGQTIIDKFTSNA-DVAFAIVLL 418 Query: 211 TPDDSGSALAS-ESTRLRARQNVLYELGYFAGKLGRGKVLVLRKGDIEIPSDLAGVLYTE 269 T DD+ + + S RLRARQNV++ELG+F G+L + V +L KGDIE PSD+ G+ +T Sbjct: 419 TSDDNCTENHNGSSPRLRARQNVIFELGFFLGRLDKKNVAMLIKGDIEKPSDIEGIGFTV 478 Query: 270 LDEHGGWKRKLLSELAYAGVPFDKDKA 296 ++++G WK KL E+ AG+ DK+K Sbjct: 479 MEDNGAWKSKLADEMKAAGLNIDKNKI 505 >UniRef50_C7H3F1 Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H3F1_9FIRM Length = 226 Score = 169 bits (429), Expect = 7e-41, Method: Composition-based stats. Identities = 57/153 (37%), Positives = 81/153 (52%), Gaps = 4/153 (2%) Query: 144 PAVFRPVSRKIFIVHGHDNDALQSVARFISRIGLEEIILSERPDGSRTIIEKFEAESGDV 203 +++K+F+V+GHDN+A + + R LE +I+ + +TIIEK E +G Sbjct: 70 KIATPTLNKKVFVVYGHDNNARTQLEAMLRRWDLEPLIIDQLASKGQTIIEKLEEYTGQA 129 Query: 204 SFAIVLMTPDDSGSALASE-STRLRARQNVLYELGYFAGKLGRGKVLVLRKG--DIEIPS 260 +F IVL TPDD G A E + RARQNV+ ELG K+GR KV +L +E PS Sbjct: 130 NFGIVLATPDDVGYAKDHEDDKKFRARQNVVLELGMLLAKIGRSKVAILLSQADKMERPS 189 Query: 261 DLAGVLYTELDEH-GGWKRKLLSELAYAGVPFD 292 D+ G++Y + K L EL G D Sbjct: 190 DIDGLIYIPFSNNVEEGKVSLAKELKRNGYTID 222 >UniRef50_C1DBI6 Putative uncharacterized protein n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1DBI6_LARHH Length = 252 Score = 168 bits (426), Expect = 2e-40, Method: Composition-based stats. Identities = 59/163 (36%), Positives = 86/163 (52%), Gaps = 6/163 (3%) Query: 143 EPAVFRPVSRKIFIVHGHDNDALQSVARFISRIGLEEIILSERPDGSRTIIEKFEAESGD 202 A + +++FIVHGHD+ A + + + ++GL+ +L+ TIIE EA+ G Sbjct: 88 NAATAAVIPKQVFIVHGHDDTAREQLELVLHKLGLDPYVLANTGGHGLTIIEALEAKIGK 147 Query: 203 ---VSFAIVLMTPDDSGSA--LASESTRLRARQNVLYELGYFAGKLGRGKVLVLRKGDIE 257 SF IVLMTPDD G A +S + RARQNV+ E+G +GR + +L KG +E Sbjct: 148 NAASSFGIVLMTPDDMGYALSKGQDSAQPRARQNVVLEMGMLISSIGRRNIAILVKGHLE 207 Query: 258 IPSDLAGVLYTELDEH-GGWKRKLLSELAYAGVPFDKDKALSA 299 PSD G+LY + H +L + L +G DK A Sbjct: 208 KPSDADGILYIPFNNHVKETVPRLANRLKESGFILSPDKITHA 250 >UniRef50_Q3R8P5 Putative uncharacterized protein n=1 Tax=Xylella fastidiosa subsp. sandyi Ann-1 RepID=Q3R8P5_XYLFA Length = 164 Score = 168 bits (425), Expect = 2e-40, Method: Composition-based stats. Identities = 56/145 (38%), Positives = 78/145 (53%), Gaps = 5/145 (3%) Query: 152 RKIFIVHGHDNDALQSVARFISRIGLEEIILSERPDGSRTIIEKFEAESGDVSFAIVLMT 211 K+F+V+GHD A + + R LE +IL + P +TIIEK E + +V FA+VL T Sbjct: 15 SKVFVVYGHDPVARTELEAMLRRWRLEPLILEQLPSEGQTIIEKLEKYTAEVKFAVVLAT 74 Query: 212 PDDSGSALASESTR-LRARQNVLYELGYFAGKLGRGKVLVLRKG--DIEIPSDLAGVLYT 268 PDD G E+ + RARQNV+ ELG LGR V +L K ++E PSD+ G+LY Sbjct: 75 PDDEGFCACHENEKIFRARQNVVLELGMMLTLLGRKNVAILMKQQDNMERPSDIQGLLYI 134 Query: 269 ELDEH--GGWKRKLLSELAYAGVPF 291 ++ L E+A G Sbjct: 135 PFKDNLQKDAGTILAKEMAAQGYQI 159 >UniRef50_C8PV46 Putative uncharacterized protein n=1 Tax=Enhydrobacter aerosaccus SK60 RepID=C8PV46_9GAMM Length = 287 Score = 166 bits (419), Expect = 1e-39, Method: Composition-based stats. Identities = 65/201 (32%), Positives = 97/201 (48%), Gaps = 11/201 (5%) Query: 100 SFNFCHTFFYDRNIIESIRKFTSSLVAPFVRDYQLYVENQHDPEPAVFRPVSRKIFIVHG 159 + F H D K + + + + ++ E + P K+FIVHG Sbjct: 93 AIGFYHN---DLETAILKEKEITDELITYPKGKKIKQETDLN---KSIAPKPSKVFIVHG 146 Query: 160 HDNDALQSVARFISRIGLEEIILSERPDGSRTIIEKFEAESGD--VSFAIVLMTPDDSGS 217 HD+ + V F+ +E I+L E+ D S TIIEK E + D + F IVL TPDD G Sbjct: 147 HDDPLINEVKAFLLSQSIEPIVLREQHDASLTIIEKLEQYTSDPAIGFGIVLYTPDDEGK 206 Query: 218 ALASESTRLRARQNVLYELGYFAGKLGRGKVLVL--RKGDIEIPSDLAGVLYTELDEHGG 275 + RLRARQNV++E G G R +V L ++G +E+P D+ GV+YT+ + Sbjct: 207 GIKEPEYRLRARQNVVFEHGLLIGLYTRSRVTCLVKKEGFLEMPGDVNGVVYTD-HAYND 265 Query: 276 WKRKLLSELAYAGVPFDKDKA 296 W+ + L +G D K Sbjct: 266 WRLSVAHMLNKSGYDIDYSKI 286 >UniRef50_A3CWB8 Nucleotide-binding protein containing TIR-like domain-like n=1 Tax=Methanoculleus marisnigri JR1 RepID=A3CWB8_METMJ Length = 302 Score = 164 bits (416), Expect = 3e-39, Method: Composition-based stats. Identities = 68/247 (27%), Positives = 115/247 (46%), Gaps = 42/247 (17%) Query: 84 GLKLLLIEKMADDNNFSFN--FCHTFFYDRNIIESIRK-------FTSSLVAPFVRDYQL 134 G++ + + ++ + F Y R I+ ++ F S ++D Sbjct: 57 GIEDAEVREWYNETLALVDHVFGTQNLYVRRFIKLQKEHDVDIFGFNSFSTGRLLKDSFN 116 Query: 135 YVENQHDPEPAVFRPVS------RKIFIVHGHDNDALQSVARFISRIGLEEIILSERPDG 188 +E+ S R++FIVHGH+ V +F+++ LE IIL ++ + Sbjct: 117 ILEDCIKQLEMKINITSKPKKQDRRVFIVHGHNEQTKDEVEKFLTKYSLEPIILHKQANL 176 Query: 189 SRTIIEKFEAESGDVSFAIVLMTPDDSGSALAS-------------------------ES 223 +TIIEK E S V FAI+L+T DD G+ + ++ Sbjct: 177 GKTIIEKVEHYSNSVRFAIILLTGDDIGAKKNTPHNPPSFQTKKGTLIANDQWKNAILDN 236 Query: 224 TRLRARQNVLYELGYFAGKLGRGKVLVLRKGDIEIPSDLAGVLYTELDEHGGWKRKLLSE 283 + RARQNV++E GYF G LGR V++L + +E+PSD G+LY L+ W+ +L++E Sbjct: 237 LKKRARQNVIFEFGYFVGLLGRENVIILYEDGVELPSDTQGLLYISLN--SDWQNQLVNE 294 Query: 284 LAYAGVP 290 + G+ Sbjct: 295 IKAVGID 301 >UniRef50_C6M8A7 Putative uncharacterized protein n=1 Tax=Neisseria sicca ATCC 29256 RepID=C6M8A7_NEISI Length = 259 Score = 158 bits (399), Expect = 3e-37, Method: Composition-based stats. Identities = 57/153 (37%), Positives = 85/153 (55%), Gaps = 6/153 (3%) Query: 153 KIFIVHGHDNDALQSVARFISRIGLEEIILSERPDGSRTIIEKFEAESG----DVSFAIV 208 K+F+VHGHD A + + + ++G+E +L TIIE E + G +V F IV Sbjct: 105 KVFVVHGHDEMAREQLELVLHKLGIEHFVLQNTGGNGLTIIEALEQQIGTAPTEVKFGIV 164 Query: 209 LMTPDDSGSALAS-ESTRLRARQNVLYELGYFAGKLGRGKVLVLRKGDIEIPSDLAGVLY 267 L+TPDD G A+ S + + RARQNV+ E+G +GR V +L+KGD+E+PSD G+LY Sbjct: 165 LLTPDDMGYAIKSPDKVQPRARQNVVLEMGMLLSSIGRKHVAILKKGDLEVPSDANGILY 224 Query: 268 TELDEH-GGWKRKLLSELAYAGVPFDKDKALSA 299 D H +L L +G + + + A Sbjct: 225 IGFDNHVRETVSRLAERLTESGFKINPENIIKA 257 >UniRef50_C3L6B4 Conserved domain protein n=10 Tax=Bacillus anthracis RepID=C3L6B4_BACAC Length = 273 Score = 157 bits (397), Expect = 4e-37, Method: Composition-based stats. Identities = 60/159 (37%), Positives = 96/159 (60%), Gaps = 7/159 (4%) Query: 139 QHDPEPAVFRPVSRKIFIVHGHDNDALQSVARFISRIGLEEIILSERPDGSRTIIEKFEA 198 + A + K+FIVHGHD++ Q + F++ IG++ ++L + T++EKFE Sbjct: 114 KEAEVAASVEVDNTKVFIVHGHDDNLKQQLEIFLNSIGIKPVVLHREANEGLTVLEKFEK 173 Query: 199 ESGDVSFAIVLMTPDDSG-----SALASESTRLRARQNVLYELGYFAGKLGRGKVLVLRK 253 S DV +A VL+TPDD G A + E RARQNV++ELG+F GKLGR KV L K Sbjct: 174 HS-DVQYAFVLLTPDDIGCSVKERAKSVEEYSFRARQNVIFELGFFIGKLGRAKVCTLYK 232 Query: 254 GDIEIPSDLAGVLYTELDEH-GGWKRKLLSELAYAGVPF 291 +E+P+D++G++Y +++++ ++ EL AG+ Sbjct: 233 DGVELPNDISGLVYQKVNDNIEDVGYHIMKELRAAGLKV 271 >UniRef50_B7M8G7 Putative uncharacterized protein n=2 Tax=Escherichia coli RepID=B7M8G7_ECO8A Length = 253 Score = 155 bits (393), Expect = 1e-36, Method: Composition-based stats. Identities = 57/161 (35%), Positives = 84/161 (52%), Gaps = 8/161 (4%) Query: 147 FRPVSRKIFIVHGHDNDALQSVARFISRIGL-EEIILSERPDGSRTIIEKFEAESGD--- 202 + +KIFIVHGHD+ A + + + ++GL + IL TIIE+ E E G Sbjct: 91 PSELPKKIFIVHGHDHTAKEQLELILHKLGLPDHFILQNTGGTGLTIIEELEREIGQGQT 150 Query: 203 -VSFAIVLMTPDDSGSAL--ASESTRLRARQNVLYELGYFAGKLGRGKVLVLRKGDIEIP 259 F IVL+TPDD G + + RARQNV+ E+G LGR V +L+K +E P Sbjct: 151 ATRFGIVLLTPDDMGYSKRAGEAEIQPRARQNVVLEMGMLLSSLGRSNVAILQKQHLEQP 210 Query: 260 SDLAGVLYTELDEH-GGWKRKLLSELAYAGVPFDKDKALSA 299 SD G+LY ++H +L+ L +G F + + +A Sbjct: 211 SDANGILYLNFNDHVRETVPRLVQRLQNSGFEFTQAQIANA 251 >UniRef50_B2I7C5 Putative uncharacterized protein n=8 Tax=Proteobacteria RepID=B2I7C5_XYLF2 Length = 234 Score = 154 bits (390), Expect = 3e-36, Method: Composition-based stats. Identities = 52/125 (41%), Positives = 73/125 (58%), Gaps = 3/125 (2%) Query: 145 AVFRPVSRKIFIVHGHDNDALQSVARFISRIGLEEIILSERPDGSRTIIEKFEAESGDVS 204 A +P+ K+F+V+GHD A + + R LE +IL + P +TIIEK E + +V Sbjct: 80 AATKPMLSKVFVVYGHDAAARTELEAMLRRWKLEPLILDQLPSQGQTIIEKLEKYTAEVK 139 Query: 205 FAIVLMTPDDSGSALASEST-RLRARQNVLYELGYFAGKLGRGKVLVLRKG--DIEIPSD 261 FA+VL TPDD G E+ + RARQNV+ EL LGR V +L K ++E PSD Sbjct: 140 FAVVLATPDDEGFPACQENEKKFRARQNVVLELDMMLTLLGRKNVAILMKQQDNMERPSD 199 Query: 262 LAGVL 266 + G+L Sbjct: 200 IQGLL 204 >UniRef50_Q3SKL0 Putative uncharacterized protein n=2 Tax=Betaproteobacteria RepID=Q3SKL0_THIDA Length = 261 Score = 139 bits (351), Expect = 9e-32, Method: Composition-based stats. Identities = 53/173 (30%), Positives = 87/173 (50%), Gaps = 10/173 (5%) Query: 119 KFTSSLVAPFVRDYQLYVENQHDPE---PAVFRPVSRKIFIVHGHDNDALQSVARFISRI 175 ++ S + RD E + + E P + +R++FI HG D + A I Sbjct: 92 RYARSQLEVLARDIDQIFELRANSELAPPLIAAATTRRVFISHGRAPDWREVQAYVEKDI 151 Query: 176 GLEEIILSERPDGSRTIIEKFEAESGDVSFAIVLMTPDDSGSALASESTRLRARQNVLYE 235 GL + L++ P+ RTI+ K SG A+++MT DD +A + RAR+NV++E Sbjct: 152 GLPTLELAQEPNQGRTILAKLMEASGQCDSAVIVMTGDDLDAA-----GQARARENVIHE 206 Query: 236 LGYFAGKLGRGKVLVLRKGDIEIPSDLAGVLYTELDEH--GGWKRKLLSELAY 286 +G+F GK G G+V +L + + IPS++ G++YT + L EL Sbjct: 207 IGFFQGKYGLGRVCLLHEEGVSIPSNIHGLVYTPFPKGMVSACFGVLTRELKA 259 >UniRef50_Q54F65 Protein tirC n=1 Tax=Dictyostelium discoideum RepID=TIRC_DICDI Length = 201 Score = 139 bits (351), Expect = 1e-31, Method: Composition-based stats. Identities = 49/147 (33%), Positives = 80/147 (54%), Gaps = 13/147 (8%) Query: 153 KIFIVHGHDNDALQSVARFISRIGLEEIILSERPDGSRTIIEKFEAESGDVSFAIVLMTP 212 K+FIVHGH+N + V++F+ +G E I+L E+P+ +TIIEK E E + F IV+M+P Sbjct: 55 KVFIVHGHNNIVREKVSKFLFEMGFEPILLFEKPNNGQTIIEKLEKEISNCKFGIVIMSP 114 Query: 213 DDSGSALASESTRL----RARQNVLYELGYFAGKLGRGKVLVL------RKGDIEIPSDL 262 D+ ++ R NV++E GY GK GR V+ L + + ++PSDL Sbjct: 115 DNKAFTKKDSNSDYVEIAYPRLNVVFEFGYLIGKFGRSNVIYLSVPYNGKSQNYDLPSDL 174 Query: 263 AGVLYTELDEHGGWKRKLLSELAYAGV 289 G ++ E ++L +E+ + Sbjct: 175 LGYVWINYTEDL---KELENEINFGNY 198 >UniRef50_C1BE84 Putative uncharacterized protein n=1 Tax=Rhodococcus opacus B4 RepID=C1BE84_RHOOB Length = 671 Score = 132 bits (332), Expect = 2e-29, Method: Composition-based stats. Identities = 48/177 (27%), Positives = 75/177 (42%), Gaps = 20/177 (11%) Query: 136 VENQHDPEPAVFRPVS-----RKIFIVHGHDNDALQSVARFISRIGLEEIILSERPD--- 187 Q E V +PV+ R++F+VHG D+ +S+ + + L I E Sbjct: 152 DLRQSQRETPVSQPVTSPARDRRVFLVHGRDHRIKKSMVQLLRTFDLRVIEWEEAASYTG 211 Query: 188 -GSRTIIEKFEAESGDVSFAIVLMTPDDSGSALAS----------ESTRLRARQNVLYEL 236 GS T ++ A +VL TPDD G + R NV++E Sbjct: 212 SGSPTTMDIVTAGMEAAGAVVVLFTPDDLGRCRDEFLSDHDPQFERDLTPQPRMNVIFEA 271 Query: 237 GYFAGKLGRGKVLVLRKGDIEIPSDLAGVLYTELDEHGGWKRKLLSELAYAGVPFDK 293 G A + R KV+++R G + SD+AGV Y ++ + +R L L G+ D Sbjct: 272 GM-AMQKDREKVVLVRFGGVREMSDIAGVNYVQIKDTSDSRRDLGRRLRNTGLAVDM 327 >UniRef50_C6AF08 Putative nucleotide-binding protein n=1 Tax=Bartonella grahamii as4aup RepID=C6AF08_BARGA Length = 151 Score = 131 bits (330), Expect = 2e-29, Method: Composition-based stats. Identities = 50/148 (33%), Positives = 79/148 (53%), Gaps = 9/148 (6%) Query: 152 RKIFIVHGHDNDALQSVARFISRIGLEEIILSERPDGSRTIIEKFEAESG----DVSFAI 207 KIFIV+ +++ L+ R + ++GLE +L D T IE F+ E F I Sbjct: 2 PKIFIVY-NNHTILEQTERVLFKLGLEPYVLKFGSD-DLTTIEDFKQEISMQTNSPKFGI 59 Query: 208 VLMTPDDSGSALASE--STRLRARQNVLYELGYFAGKLGRGKVLVLRKGDIEIPSDLAGV 265 VL+TPDD G A +++ + RA QNV++++G K+ + +L+K D+E+PSD G+ Sbjct: 60 VLLTPDDIGYAKSADKKDAQPRANQNVIFKMGMLFPKISCRNIAILKKRDVEVPSDYEGI 119 Query: 266 LYTELDEH-GGWKRKLLSELAYAGVPFD 292 Y +EH K++ L AG D Sbjct: 120 NYIPFNEHVKETLPKIVELLNTAGFNLD 147 >UniRef50_Q98RD6 Putative uncharacterized protein MYPU_0730 n=1 Tax=Mycoplasma pulmonis RepID=Q98RD6_MYCPU Length = 231 Score = 129 bits (323), Expect = 1e-28, Method: Composition-based stats. Identities = 52/161 (32%), Positives = 85/161 (52%), Gaps = 3/161 (1%) Query: 132 YQLYVENQHDPEPAVFRPVSRKIFIVHGHDNDALQSVARFISRIGLEEIILSERPDGSRT 191 L N D + + K+FIVHGHD AL + + + L +I + + Sbjct: 70 KNLSENNNSDNTTTMPNIKNDKVFIVHGHDKIALLELKDLLRDLKLNVVISQNKTTRGLS 129 Query: 192 IIEKFEAESGDVSFAIVLMTPDDSGSALASESTR--LRARQNVLYELGYFAGKLGRGKVL 249 I++ + VSFA L+TPDD G + ++ RARQNV++E+G GKL + K++ Sbjct: 130 ILDGVLEDISSVSFAFDLLTPDDKGYSNLDGESKTLPRARQNVIFEMGMLYGKLPKNKIM 189 Query: 250 VLRKGDIEIPSDLAGVLYTEL-DEHGGWKRKLLSELAYAGV 289 +L K D+E+PSD+ G++Y ++ + + +EL AGV Sbjct: 190 ILNKNDVELPSDINGMIYKSFKNDIKEIRYDIETELKEAGV 230 >UniRef50_Q3RAE9 Similar to nucleotide-binding protein containing TIR-like domain n=2 Tax=Xylella fastidiosa RepID=Q3RAE9_XYLFA Length = 114 Score = 122 bits (305), Expect = 2e-26, Method: Composition-based stats. Identities = 37/92 (40%), Positives = 54/92 (58%), Gaps = 1/92 (1%) Query: 150 VSRKIFIVHGHDNDALQSVARFISRIGLEEIILSERPDGSRTIIEKFEAESGDVSFAIVL 209 + K+F+V+GHD+ A + + R LE +IL + P +TIIEK E + +V FA+VL Sbjct: 1 MLSKVFVVYGHDDAARTELEAMLRRWKLEPLILDQLPSEGQTIIEKLEKYTAEVKFAVVL 60 Query: 210 MTPDDSGSALASESTRL-RARQNVLYELGYFA 240 TPDD G E+ ++ RARQN G+ A Sbjct: 61 ATPDDEGFRACHENEKMFRARQNCCTGTGHDA 92 >UniRef50_A4AGR7 Putative uncharacterized protein n=1 Tax=marine actinobacterium PHSC20C1 RepID=A4AGR7_9ACTN Length = 264 Score = 113 bits (282), Expect = 1e-23, Method: Composition-based stats. Identities = 37/149 (24%), Positives = 73/149 (48%), Gaps = 10/149 (6%) Query: 129 VRDYQLYVENQHDPEPAVFRPVSR-KIFIVHGHDNDAL--QSVARFISRIGLEEIILSER 185 V ++ +V ++ D + ++FI HG ++ I I ++ ++ R Sbjct: 104 VEEFTQFVLDRCDQGKRIQLARKPLQVFIGHGRSEAWKDLKNHLTDIHHIKVDAYEVASR 163 Query: 186 PDGSRTIIEKFEAESGDVSFAIVLMTPDDSGSALASESTRLRARQNVLYELGYFAGKLGR 245 G TI E ++ + A+++MT +D+ + +RARQNV++E G F G+LG Sbjct: 164 --GGFTIREVLDSMLKSSTLALLVMTAEDT-----QDDGSMRARQNVVHEAGLFQGRLGF 216 Query: 246 GKVLVLRKGDIEIPSDLAGVLYTELDEHG 274 + L+L++ +E+ S++ GV + E Sbjct: 217 QRALILKERGVELMSNVDGVQFIEFAPGN 245 >UniRef50_C3DUD8 Nucleotide-binding protein containing TIR-like domain n=2 Tax=Bacteria RepID=C3DUD8_BACTS Length = 73 Score = 112 bits (280), Expect = 1e-23, Method: Composition-based stats. Identities = 32/70 (45%), Positives = 42/70 (60%) Query: 226 LRARQNVLYELGYFAGKLGRGKVLVLRKGDIEIPSDLAGVLYTELDEHGGWKRKLLSELA 285 +RARQNV++E GY +LGR V L K +IE P+D++GV+Y D GW L EL Sbjct: 1 MRARQNVVFEHGYLIARLGRSNVCALVKDNIEKPNDISGVVYVNYDSGNGWHMALFKELK 60 Query: 286 YAGVPFDKDK 295 AG D +K Sbjct: 61 NAGYELDANK 70 >UniRef50_B2FIX1 Putative uncharacterized protein n=1 Tax=Stenotrophomonas maltophilia K279a RepID=B2FIX1_STRMK Length = 256 Score = 107 bits (266), Expect = 6e-22, Method: Composition-based stats. Identities = 35/128 (27%), Positives = 57/128 (44%), Gaps = 9/128 (7%) Query: 149 PVSRKIFIVHGHDNDALQ--SVARFISRIGLEEIILSERPDGSRTIIEKFEAESGDVSFA 206 S +FI HG R +E R +I + E+ + SFA Sbjct: 117 AASPVVFIGHGRSPAWKDLRDHLRDQHDYRIESYESGARA--GHSIRDILESMAAKSSFA 174 Query: 207 IVLMTPDDSGSALASESTRLRARQNVLYELGYFAGKLGRGKVLVLRKGDIEIPSDLAGVL 266 +++MT +D S +RARQNV++E G F G+LG + ++L + D+ S++ GV Sbjct: 175 LLVMTGEDM-----DASGEMRARQNVIHEAGIFQGRLGFSRAIMLLEEDVVEFSNVDGVQ 229 Query: 267 YTELDEHG 274 Y + Sbjct: 230 YIPFSKGR 237 >UniRef50_C6N7T4 Putative uncharacterized protein n=1 Tax=Legionella drancourtii LLAP12 RepID=C6N7T4_9GAMM Length = 260 Score = 103 bits (256), Expect = 8e-21, Method: Composition-based stats. Identities = 38/122 (31%), Positives = 63/122 (51%), Gaps = 9/122 (7%) Query: 154 IFIVHGHDNDAL--QSVARFISRIGLEEIILSERPDGSRTIIEKFEAESGDVSFAIVLMT 211 +FI HG +D + + +I +E R TI + E S +FAI+++T Sbjct: 125 VFIGHGRSDDWKIIKDDLQDKHKITIESFESGARA--GHTIRDILEEMSTTSNFAILVLT 182 Query: 212 PDDSGSALASESTRLRARQNVLYELGYFAGKLGRGKVLVLRKGDIEIPSDLAGVLYTELD 271 +D + +RARQNV++E G F GKLG + +++ + D+EIPS+L G+ Sbjct: 183 AEDEL-----KDGSIRARQNVIHEAGLFQGKLGFNRAIIVLQEDVEIPSNLDGIQQLRYK 237 Query: 272 EH 273 E+ Sbjct: 238 EN 239 >UniRef50_Q24ZU3 Putative uncharacterized protein n=1 Tax=Desulfitobacterium hafniense Y51 RepID=Q24ZU3_DESHY Length = 159 Score = 100 bits (249), Expect = 5e-20, Method: Composition-based stats. Identities = 39/152 (25%), Positives = 62/152 (40%), Gaps = 8/152 (5%) Query: 151 SRKIFIVHGHDNDALQSV---ARFISRIGLEEIILSERP--DGSRTIIEKFEAESGDVSF 205 S IF+ A + A I G ++ E V Sbjct: 10 SMNIFLGSSSSQKAKDDMLKIAMLIEEEGHTPFPWNKEGLFPLGEYPAESLRNICQQVDA 69 Query: 206 AIVLMTPDDSGSALASESTRLRARQNVLYELGYFAGKLGRGKVLVLRKGDIEIPSDLAGV 265 AI++ DD + L+ R NV+YE G F G LG + ++ R+G ++ SDL G+ Sbjct: 70 AILIFHEDDM--TWYRNNYVLKPRDNVVYEYGLFEGHLGPKRTIICRRGTPKLASDLEGI 127 Query: 266 LYTELDEHGGWKRKLLSELAYAGVPFDKDKAL 297 Y +LD+ + +L+ L + G P D + L Sbjct: 128 TYCDLDKEYRAQSELIKWLRFLG-PLDGIQKL 158 >UniRef50_Q6AL85 Putative uncharacterized protein n=1 Tax=Desulfotalea psychrophila RepID=Q6AL85_DESPS Length = 258 Score = 99.8 bits (247), Expect = 1e-19, Method: Composition-based stats. Identities = 36/137 (26%), Positives = 63/137 (45%), Gaps = 9/137 (6%) Query: 138 NQHDPEPAVFRPVSRKIFIVHGHDNDAL--QSVARFISRIGLEEIILSERPDGSRTIIEK 195 + P+ + +FI HG + + + I +E R TI + Sbjct: 112 TEDYVTPSPELEENLTVFIGHGGSSQWRDLKDHLQDKHNIKIEAYETGARA--GHTIRDI 169 Query: 196 FEAESGDVSFAIVLMTPDDSGSALASESTRLRARQNVLYELGYFAGKLGRGKVLVLRKGD 255 E + +FA+++MT +D ++ +LRARQNV++E+G F G+LG + +VL + Sbjct: 170 LEDMVNNSTFALLVMTAEDE-----QDTGQLRARQNVIHEIGLFQGRLGFNRAIVLMENS 224 Query: 256 IEIPSDLAGVLYTELDE 272 E S++AGV Sbjct: 225 TEEFSNIAGVQQIRYSN 241 >UniRef50_A3EJX2 SH3 domain protein n=2 Tax=Vibrionaceae RepID=A3EJX2_VIBCH Length = 297 Score = 96.3 bits (238), Expect = 1e-18, Method: Composition-based stats. Identities = 27/102 (26%), Positives = 50/102 (49%), Gaps = 4/102 (3%) Query: 176 GLEEIILSERPDGSRTIIEKFEAESGDVSFAIVLMTPDDSGSALASESTRLRARQNVLYE 235 +E I + + + ++ +V FA+ + P+D + ++ + R NVL+E Sbjct: 43 KVEVTIWDKIFNSGGDTLTSLTEKAKNVDFALFIFRPEDL--TMMRDNPKPTVRDNVLFE 100 Query: 236 LGYFAGKLGRGKVLVLRK--GDIEIPSDLAGVLYTELDEHGG 275 LG F G LG+ + +L+ D+ +P+DL GV + D H Sbjct: 101 LGLFIGALGKDRCFILKPRNEDLHMPTDLLGVNMNDYDPHRS 142 >UniRef50_Q480E8 Conserved domain protein n=5 Tax=Gammaproteobacteria RepID=Q480E8_COLP3 Length = 280 Score = 92.8 bits (229), Expect = 1e-17, Method: Composition-based stats. Identities = 34/121 (28%), Positives = 55/121 (45%), Gaps = 6/121 (4%) Query: 174 RIGLEEIILSERP-DGSRTIIEKFEAESGDVSFAIVLMTPDDSGSALASESTRLRARQNV 232 E I + S ++ +S V F+ + +PDD + E + R NV Sbjct: 26 EFDAEVTIWRSGTFNLSSNTLDDLILKSKSVDFSAFIFSPDDLAIMRSRE--QYVVRDNV 83 Query: 233 LYELGYFAGKLGRGKVLVLRKGDIEI--PSDLAGVLYTELDEHGGWKRKLLSELAYAGVP 290 L+ELG F G +G+ + +++ D+E+ PSDL G+ T+ D + L S L YA Sbjct: 84 LFELGLFIGSIGKERCFIIKPRDVELHFPSDLLGITPTDYDPNRS-DDNLTSSLTYASTQ 142 Query: 291 F 291 Sbjct: 143 I 143 >UniRef50_C9PBW9 Putative uncharacterized protein n=2 Tax=Vibrio RepID=C9PBW9_VIBFU Length = 277 Score = 92.0 bits (227), Expect = 2e-17, Method: Composition-based stats. Identities = 30/127 (23%), Positives = 55/127 (43%), Gaps = 5/127 (3%) Query: 152 RKIFIVHGHDNDALQSVARFISRIGLEEIILSERP-DGSRTIIEKFEAESGDVSFAIVLM 210 ++FI ++ + E I S T I+ +S V FA+ + Sbjct: 4 PRLFIASSAESLPIAEAVNVNLDHDFEVTIWKNGTFKLSSTTIDDLVEKSSTVDFALFIF 63 Query: 211 TPDDSGSALASESTRLRARQNVLYELGYFAGKLGRGKVLVLRKGDIEI--PSDLAGVLYT 268 PDD S + + R NV++E+G F G +G+ + +L+ ++E+ P+DL GV Sbjct: 64 APDDITSIRSRKEHV--VRDNVIFEMGLFVGAIGKSRSFILKPRNVEMHLPTDLLGVTPA 121 Query: 269 ELDEHGG 275 + + Sbjct: 122 DYEATRS 128 >UniRef50_C5BHR5 Putative uncharacterized protein n=1 Tax=Teredinibacter turnerae T7901 RepID=C5BHR5_TERTT Length = 276 Score = 91.7 bits (226), Expect = 3e-17, Method: Composition-based stats. Identities = 30/127 (23%), Positives = 54/127 (42%), Gaps = 5/127 (3%) Query: 152 RKIFIVHGHDNDALQSVARFISRIGLEEIILSERP-DGSRTIIEKFEAESGDVSFAIVLM 210 ++FI ++ A+ E + S + I+ +S V FA+ + Sbjct: 4 PRLFIASSSESLAIAEAVNVNLDHEFEITVWKNGTFKLSSSTIDDLVEKSSFVDFALFIF 63 Query: 211 TPDDSGSALASESTRLRARQNVLYELGYFAGKLGRGKVLVLRKGDIEI--PSDLAGVLYT 268 PDD + + R NV++E+G F G +G+ + +L+ IE+ P+DL GV Sbjct: 64 APDDISEIRSRKEHV--VRDNVIFEMGLFVGAIGKSRSFILKPRGIEMHLPTDLLGVTPA 121 Query: 269 ELDEHGG 275 + D Sbjct: 122 DYDAGRS 128 >UniRef50_B0PHL7 Putative uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PHL7_9FIRM Length = 328 Score = 91.7 bits (226), Expect = 3e-17, Method: Composition-based stats. Identities = 31/109 (28%), Positives = 50/109 (45%), Gaps = 4/109 (3%) Query: 168 VARFISRIGLEEIILSERP-DGSRTIIEKFEAESGDVSFAIVLMTPDDSGSALASESTRL 226 V + IG + I+ S+ + +E ++ +A+VL T DD A+ + Sbjct: 32 VKASLENIG-KVILWSDNFFRLGESTLENLCKQAAGFDYAVVLYTKDDH--AVVRKKQCF 88 Query: 227 RARQNVLYELGYFAGKLGRGKVLVLRKGDIEIPSDLAGVLYTELDEHGG 275 AR NVL+E G F G L R + L + + +PSDL+G+ Y Sbjct: 89 TARDNVLFEHGIFTGVLSRYRTFALIQKGVRVPSDLSGITYIFFKNEKD 137 >UniRef50_Q8TKX7 Predicted protein n=1 Tax=Methanosarcina acetivorans RepID=Q8TKX7_METAC Length = 469 Score = 90.1 bits (222), Expect = 7e-17, Method: Composition-based stats. Identities = 34/98 (34%), Positives = 56/98 (57%), Gaps = 7/98 (7%) Query: 192 IIEKFEAESGDVSFAIVLMTPDDSGSALASESTRLRARQNVLYELGYFAGKLGRGKVLVL 251 +E E FAI+++TPDD ++ + R NVL+ELG F G+LGR +V ++ Sbjct: 47 TLESLEKSLEKFEFAILVLTPDDV--VISRDKVVQLPRDNVLFELGLFMGRLGRKRVFIV 104 Query: 252 R--KGDIEIPSDLAGVLYTEL---DEHGGWKRKLLSEL 284 + ++++PSDLAGV + DE+ K+ ++EL Sbjct: 105 YCDEENVKLPSDLAGVTVCRISKPDENKELKKYSITEL 142 >UniRef50_C4ZIE6 Putative uncharacterized protein n=1 Tax=Thauera sp. MZ1T RepID=C4ZIE6_THASP Length = 303 Score = 89.7 bits (221), Expect = 9e-17, Method: Composition-based stats. Identities = 32/109 (29%), Positives = 54/109 (49%), Gaps = 1/109 (0%) Query: 167 SVARFISRIGLEEIILSERPDGSRTIIEKFEAESGDVSFAIVLMTPDDSGSALASESTRL 226 + R+++ + RTII++ E + I L T DD A SE+ + Sbjct: 181 QIKRYLASQNASVLDWQSDFIPGRTIIDQIEEAASRSIAGIFLFTKDD-DLANPSEAHQS 239 Query: 227 RARQNVLYELGYFAGKLGRGKVLVLRKGDIEIPSDLAGVLYTELDEHGG 275 R NV++E GYF+G G+ VL++R+ ++P+DL G +Y L + Sbjct: 240 VPRDNVVFEAGYFSGLKGKRNVLIVREAGSKMPADLGGDIYAALMDRND 288 >UniRef50_B5JSV8 YebB n=4 Tax=Proteobacteria RepID=B5JSV8_9GAMM Length = 90 Score = 89.4 bits (220), Expect = 1e-16, Method: Composition-based stats. Identities = 30/78 (38%), Positives = 43/78 (55%), Gaps = 3/78 (3%) Query: 215 SGSALAS--ESTRLRARQNVLYELGYFAGKLGRGKVLVLRKGDIEIPSDLAGVLYTELDE 272 G + + E+ + RARQNV+ E+G +GRG V +L+KG +E PSD G+LY ++ Sbjct: 1 MGYSKSDGAENVQPRARQNVVLEMGMLISAVGRGNVAILKKGHLEAPSDAQGILYVPFND 60 Query: 273 H-GGWKRKLLSELAYAGV 289 H KL L AG Sbjct: 61 HVKEAVPKLADRLRAAGF 78 >UniRef50_A4Z1J6 Putative uncharacterized protein n=2 Tax=Rhizobiales RepID=A4Z1J6_BRASO Length = 67 Score = 87.8 bits (216), Expect = 4e-16, Method: Composition-based stats. Identities = 26/67 (38%), Positives = 37/67 (55%) Query: 233 LYELGYFAGKLGRGKVLVLRKGDIEIPSDLAGVLYTELDEHGGWKRKLLSELAYAGVPFD 292 ++ELG+F GKLG V L K +E PSD G+ Y + WK +L E+ +A + FD Sbjct: 1 MFELGFFIGKLGPAHVAALLKSGVEKPSDFDGIAYISYGQGTSWKTELAREMLHAKISFD 60 Query: 293 KDKALSA 299 L+A Sbjct: 61 TSAVLTA 67 >UniRef50_A3IZP6 Putative uncharacterized protein n=1 Tax=Cyanothece sp. CCY0110 RepID=A3IZP6_9CHRO Length = 320 Score = 87.8 bits (216), Expect = 5e-16, Method: Composition-based stats. Identities = 28/110 (25%), Positives = 49/110 (44%), Gaps = 8/110 (7%) Query: 178 EEIILSERP-DGSRTIIEKFEAESGDVSFAIVLMTPDDSGSALASESTRLRARQNVLYEL 236 E + ++ S++ +E + + F+I + TP+D+ E+ R NV++EL Sbjct: 36 EPTVWNQDLFKLSQSTLEDLCRQVENFDFSIFVFTPNDTVIIRKEENR--SVRDNVVFEL 93 Query: 237 GYFAGKLGRGKVLVLRKGD--IEIPSDLAGV---LYTELDEHGGWKRKLL 281 G F G LGR + + +P+DL G+ Y + WK L Sbjct: 94 GLFIGNLGRNRCFFIIPRGEEFHLPTDLLGIKAGTYDSSRQDKNWKAALG 143 >UniRef50_C5CLS5 TPR repeat-containing protein n=1 Tax=Variovorax paradoxus S110 RepID=C5CLS5_VARPS Length = 500 Score = 87.4 bits (215), Expect = 5e-16, Method: Composition-based stats. Identities = 30/82 (36%), Positives = 41/82 (50%), Gaps = 4/82 (4%) Query: 187 DGSRTIIEKFEAESGDVSFAIVLMTPDDSGSALASESTRLRARQNVLYELGYFAGKLGRG 246 D S T IE D FAI + + DD +ES L R NV++E G F G+LGR Sbjct: 40 DLSSTTIESLTKMLHDSDFAIFVFSADDMLKIRKTES--LSVRDNVMFEFGLFVGRLGRE 97 Query: 247 KVLVLRKGD--IEIPSDLAGVL 266 +V L + +P+DL G+ Sbjct: 98 RVFFLLPQNEVFHLPTDLLGIT 119 >UniRef50_Q212T3 Putative uncharacterized protein n=1 Tax=Rhodopseudomonas palustris BisB18 RepID=Q212T3_RHOPB Length = 253 Score = 86.7 bits (213), Expect = 8e-16, Method: Composition-based stats. Identities = 35/78 (44%), Positives = 56/78 (71%), Gaps = 3/78 (3%) Query: 137 ENQHDPEPAVFRPVSRKIFIVHGHDNDALQSVARFISRIGLEEIILSERPDGSRTIIEKF 196 ++ PE + R S+++FIVHGHD++ SV+ F+ IGLE +IL+++ + +TIIEKF Sbjct: 147 QSLWAPEAQLER--SKRVFIVHGHDDNMKLSVSNFLMAIGLEPVILADQVNAGKTIIEKF 204 Query: 197 EAESGDVSFAIVLMTPDD 214 E + DV +A+VL++PDD Sbjct: 205 ERNA-DVGYAVVLLSPDD 221 >UniRef50_B2IV30 Putative uncharacterized protein n=2 Tax=Bacteria RepID=B2IV30_NOSP7 Length = 372 Score = 86.7 bits (213), Expect = 1e-15, Method: Composition-based stats. Identities = 33/166 (19%), Positives = 62/166 (37%), Gaps = 6/166 (3%) Query: 105 HTFFYDRNIIESIRKFTSSLVAPFVRDYQLYVENQHDPEPAVFRPVSRKIFIVHGHDNDA 164 H + + + + + L++ N+ +P + +FI HGH Sbjct: 191 HIYLQAQLLAVQSPSTVAKSLKKIANRLALHLTNKSRTYMYSSQPGTH-VFIGHGHSPLW 249 Query: 165 LQSVARFISRIGLEEIILSERPDGSRTIIEKFEAESGDVSFAIVLMTPDDSGSALASEST 224 R+ L + P + + A ++MT +D Sbjct: 250 RDLKDFISERLKLPWDEFNRLPIAGINNTVRLSQMLDSAAIAFLIMTGEDE-----QSDL 304 Query: 225 RLRARQNVLYELGYFAGKLGRGKVLVLRKGDIEIPSDLAGVLYTEL 270 +LRAR NV++E G F G+LG + ++L + E S++ G+ Y Sbjct: 305 KLRARMNVIHEAGLFQGRLGFRRAILLLEEGCENFSNVDGIGYINF 350 >UniRef50_B1M988 Cyclic nucleotide-binding n=4 Tax=Proteobacteria RepID=B1M988_METRJ Length = 303 Score = 85.1 bits (209), Expect = 3e-15, Method: Composition-based stats. Identities = 26/82 (31%), Positives = 42/82 (51%), Gaps = 4/82 (4%) Query: 192 IIEKFEAESGDVSFAIVLMTPDDSGSALASESTRLRARQNVLYELGYFAGKLGRGKVLVL 251 +E E E FA+ + PDD E R NV++ELG+F G LGR + +++ Sbjct: 195 TLETLEEELMQSDFAVAVAHPDDKTEIRDEEW--PTPRDNVVFELGFFMGSLGRQRAVLM 252 Query: 252 RKGD--IEIPSDLAGVLYTELD 271 +++PSDLAG+ + + Sbjct: 253 EPKGAKLKLPSDLAGITTIKYN 274 >UniRef50_UPI0001BC92F3 hypothetical protein PsyrptA_06199 n=1 Tax=Pseudomonas syringae pv. tabaci ATCC 11528 RepID=UPI0001BC92F3 Length = 372 Score = 85.1 bits (209), Expect = 3e-15, Method: Composition-based stats. Identities = 31/156 (19%), Positives = 57/156 (36%), Gaps = 7/156 (4%) Query: 115 ESIRKFTSSLVAPFVRDYQLYVENQHDPEPAVFRPVSRKIFIVHGHDNDALQSVARFISR 174 + L+ + Y + ++ V +FI HG + R Sbjct: 200 RLPHEAIGRLLPVLKKAYSYILRSRKKMVKDSL--VGTNVFIGHGRSHVWRDLKDFVTER 257 Query: 175 IGLEEIILSERPDGSRTIIEKFEAESGDVSFAIVLMTPDDSGSALASESTRLRARQNVLY 234 + L + P T I + A ++MT +D ++ AR NV++ Sbjct: 258 LKLPFDEFNRVPVAGITNIARLSEMLDSAVVAFIVMTAEDE-----QADGKMEARTNVIH 312 Query: 235 ELGYFAGKLGRGKVLVLRKGDIEIPSDLAGVLYTEL 270 E+G F G+LG + +VL + E S++ G+ Sbjct: 313 EVGLFQGRLGFTRAIVLLEEGCEEFSNIQGLGQIRF 348 >UniRef50_C7R666 Nucleotide-binding protein containing TIR-like domain n=1 Tax=Kangiella koreensis DSM 16069 RepID=C7R666_KANKD Length = 287 Score = 84.0 bits (206), Expect = 7e-15, Method: Composition-based stats. Identities = 33/132 (25%), Positives = 51/132 (38%), Gaps = 6/132 (4%) Query: 152 RKIFIVHGHDNDALQSVARFISRIGLEEIILSERPDGSRTIIEKFEAESGDVSFAIVLMT 211 +FI + ++ + D S I + + F I + Sbjct: 5 PNVFIASSVEGLSVAEAVNIKMEYDAQVKQWDNAFDLSSVTITSLIKRAKETEFGIFVFH 64 Query: 212 PDDSGSALASESTRLRARQNVLYELGYFAGKLGRGKVLVL----RKGDIEIPSDLAGVLY 267 PDD + E+ R NVL+ELG F G LG + VL ++ + +P+DLAGV Sbjct: 65 PDDK--TIIRENEYSTVRDNVLFELGLFIGSLGIERCFVLIPKSKETEFRLPADLAGVTT 122 Query: 268 TELDEHGGWKRK 279 T D+ K Sbjct: 123 TSYDDQLEDKVD 134 >UniRef50_A3INK0 Putative uncharacterized protein n=1 Tax=Cyanothece sp. CCY0110 RepID=A3INK0_9CHRO Length = 264 Score = 81.6 bits (200), Expect = 3e-14, Method: Composition-based stats. Identities = 33/113 (29%), Positives = 47/113 (41%), Gaps = 8/113 (7%) Query: 189 SRTIIEKFEAESGDVSFAIVLMTPDDSGSALASESTRLRARQNVLYELGYFAGKLGRGKV 248 S ++ FAI + +PDD E R NV++ELG F KLG+ + Sbjct: 41 SSNTLDDLVNSLDKFDFAIFVFSPDDISHIR--EQKYQAVRDNVIFELGLFIAKLGKRRC 98 Query: 249 LVLRKGDIE---IPSDLAGVLYTELDEHGGWKRKLLSELAYAGVPFDKDKALS 298 +L I+ +PSDL GV D LL+ L A KA++ Sbjct: 99 FILMPRGIKDFRLPSDLLGVTPATYDNSRQ-DNNLLAALGPACFDI--SKAIN 148 >UniRef50_A4EPJ5 Putative uncharacterized protein n=1 Tax=Roseobacter sp. SK209-2-6 RepID=A4EPJ5_9RHOB Length = 366 Score = 81.3 bits (199), Expect = 3e-14, Method: Composition-based stats. Identities = 31/154 (20%), Positives = 60/154 (38%), Gaps = 6/154 (3%) Query: 121 TSSLVAPFVRDYQLYVENQHDPEPAVFRPVSRKIFIVHGHDNDALQSVARFISRIGLEEI 180 + +A R ++ + E R + +FI HG + + + R+ L Sbjct: 201 AAKSLAAIARKAGSHMSRKEKQERRSERVGTN-VFIGHGRSSLWRELKDFVVGRLNLPYE 259 Query: 181 ILSERPDGSRTIIEKFEAESGDVSFAIVLMTPDDSGSALASESTRLRARQNVLYELGYFA 240 + P T I + A +++T +D + AR NV++E+G F Sbjct: 260 EFNRVPVAGVTNISRLSEMLDGAGCAFIVLTSEDE-----QADGSMHARMNVIHEVGLFQ 314 Query: 241 GKLGRGKVLVLRKGDIEIPSDLAGVLYTELDEHG 274 G+LG K +V+ + E S++ G+ + Sbjct: 315 GRLGFTKAIVVLEEGCEEFSNIQGLGQIRFPKGN 348 >UniRef50_C2LG65 Putative uncharacterized protein n=1 Tax=Proteus mirabilis ATCC 29906 RepID=C2LG65_PROMI Length = 368 Score = 80.9 bits (198), Expect = 5e-14, Method: Composition-based stats. Identities = 32/139 (23%), Positives = 60/139 (43%), Gaps = 6/139 (4%) Query: 136 VENQHDPEPAVFRPVSRKIFIVHGHDNDALQSVARFISRIGLEEIILSERPDGSRTIIEK 195 + N H+ E R + IF+ HG + + ++ L + P T I + Sbjct: 218 ISNLHEKETKASRVGTN-IFLGHGRSHLWRELKDFIKDKLHLPYDEFNRVPIAGTTNIAR 276 Query: 196 FEAESGDVSFAIVLMTPDDSGSALASESTRLRARQNVLYELGYFAGKLGRGKVLVLRKGD 255 SFA ++MT +D + ++AR NV++E+G F G+LG K ++L + Sbjct: 277 LAQMLDHASFAFLIMTAEDEL-----QDGNMQARMNVIHEVGLFQGRLGFEKAIILLEEG 331 Query: 256 IEIPSDLAGVLYTELDEHG 274 + S++ G+ + Sbjct: 332 CQEFSNINGLGQIRFPKGN 350 >UniRef50_C1F5N0 Cyclic nucleotide-binding domain protein n=2 Tax=Bacteria RepID=C1F5N0_ACIC5 Length = 302 Score = 80.5 bits (197), Expect = 6e-14, Method: Composition-based stats. Identities = 37/166 (22%), Positives = 68/166 (40%), Gaps = 11/166 (6%) Query: 123 SLVAPFVRDYQLYVENQHDPEPAVFRPVSRKIFIVHGHD--NDALQSVARFISRIGLEEI 180 ++ ++ + ++ +V + ++FI+ + + A F Sbjct: 126 QILLQMAKELARRLMQRNALVTSVSDRI--RVFIISSAEALDIARTIQNAFDHD-PFNVT 182 Query: 181 ILSERP-DGSRTIIEKFEAESGDVSFAIVLMTPDDSGSALASESTRLRARQNVLYELGYF 239 + ++ S IE E AI + PDD + R R NV++ELG+F Sbjct: 183 VWTDGVFRASHYAIESLERALDQSDVAIAVAQPDDITESRGQ--QRATPRDNVIFELGFF 240 Query: 240 AGKLGRGKVLVL--RKGDIEIPSDLAGVLYTELD-EHGGWKRKLLS 282 G+LGR + L++ R +I +PSDLAG+ + R L + Sbjct: 241 MGRLGRHRALLVEPRGEEISLPSDLAGINTITYRYDTSDLTRSLAT 286 >UniRef50_A9A6G6 Tetratricopeptide domain protein n=1 Tax=Methanococcus maripaludis C6 RepID=A9A6G6_METM6 Length = 481 Score = 80.1 bits (196), Expect = 9e-14, Method: Composition-based stats. Identities = 31/131 (23%), Positives = 54/131 (41%), Gaps = 9/131 (6%) Query: 150 VSRKIFIVHGHDNDALQSVARFISRI--GLEEIILSERP-DGSRTIIEKFEAESGDVSFA 206 + ++FI G + + + E I + + S+T IE E F Sbjct: 1 MKPRVFI--GSSVEGVNVAEAIQRHLKDDAEVKIWHQGVFELSKTSIESLENALDSFDFG 58 Query: 207 IVLMTPDDSGSALASESTRLRARQNVLYELGYFAGKLGRGKVLVLRK--GDIEIPSDLAG 264 I + +D E + R N+++E G F GKL R +V + D+ +P+DL G Sbjct: 59 IFVFNNEDILKIRGEEKSA--VRDNLIFEFGLFIGKLTRERVFFVIPSGSDLHLPTDLLG 116 Query: 265 VLYTELDEHGG 275 + Y + D + Sbjct: 117 ITYGQYDANQS 127 >UniRef50_B9TGA1 Putative uncharacterized protein n=1 Tax=Ricinus communis RepID=B9TGA1_RICCO Length = 249 Score = 79.7 bits (195), Expect = 1e-13, Method: Composition-based stats. Identities = 24/96 (25%), Positives = 43/96 (44%), Gaps = 5/96 (5%) Query: 189 SRTIIEKFEAESGDVSFAIVLMTPDDSGSALASESTRLRARQNVLYELGYFAGKLGRGKV 248 S T I + F + + +PDD ++ R NV++ELG F G+LG + Sbjct: 41 SGTTIYSLINALRNSDFGVFVFSPDDLTIMRGQQNPV--VRDNVIFELGLFIGRLGVERC 98 Query: 249 LVLRKG---DIEIPSDLAGVLYTELDEHGGWKRKLL 281 + D+ +P+DL G++ + + + K L Sbjct: 99 FFITPDHVADLRLPTDLMGIMPGQYEANRHDKNWLA 134 >UniRef50_C6W705 Nucleotide-binding protein containing TIR-like domain-like protein n=1 Tax=Dyadobacter fermentans DSM 18053 RepID=C6W705_DYAFD Length = 306 Score = 78.2 bits (191), Expect = 3e-13, Method: Composition-based stats. Identities = 25/73 (34%), Positives = 41/73 (56%), Gaps = 2/73 (2%) Query: 203 VSFAIVLMTPDDSGSALASESTRLRARQNVLYELGYFAGKLGRGKVLVLRKGDIEIPSDL 262 FAI+L + DD L ++ + AR NVL+E G + G+LGR + +++ + +PSDL Sbjct: 55 FDFAILLASADDV--VLKRDNLEISARDNVLFEFGLYVGRLGRNRAFFVKEKGLNLPSDL 112 Query: 263 AGVLYTELDEHGG 275 G+ +E D Sbjct: 113 YGITLSEFDFGSN 125 >UniRef50_C6MH81 Nucleotide-binding protein containing TIR-like domain-like protein n=1 Tax=Nitrosomonas sp. AL212 RepID=C6MH81_9PROT Length = 287 Score = 77.4 bits (189), Expect = 6e-13, Method: Composition-based stats. Identities = 33/122 (27%), Positives = 54/122 (44%), Gaps = 5/122 (4%) Query: 152 RKIFIVHGHDNDALQSVARFISRIGLEEIILSERPDGSRTIIEKFEAESGDVSFAIVLMT 211 +IFI ++ E +I SE + +++ + V +A + T Sbjct: 5 PRIFIASSTESLKTAEALNVNLDRSAETVIWSE-SKLLQNYVDRLLELTRSVDYAAFIFT 63 Query: 212 PDDSGSALASESTRLRARQNVLYELGYFAGKLGRGKVLVL--RKGDIEIPSDLAGVLYTE 269 PDD E + + R NVL+ELG F G LG+ + ++ R D IPSDL G+ + Sbjct: 64 PDDLIIMRGHEKSAI--RDNVLFELGLFMGSLGKERCFIIHPRNSDHHIPSDLLGLTSLD 121 Query: 270 LD 271 + Sbjct: 122 YE 123 >UniRef50_A7G517 Conserved domain protein n=3 Tax=Clostridium botulinum A RepID=A7G517_CLOBH Length = 206 Score = 76.3 bits (186), Expect = 1e-12, Method: Composition-based stats. Identities = 31/127 (24%), Positives = 51/127 (40%), Gaps = 5/127 (3%) Query: 152 RKIFIVHGHDNDALQSVARFISRIGLEEIILSERP-DGSRTIIEKFEAESGDVSFAIVLM 210 KIFI ++ + + E + ++ S ++ + I + Sbjct: 61 PKIFIGSSKEHLDVAYSLQEALEYSAEPTVWTQGIFKLSSNTLDDLYNNIKGMDAGIFIF 120 Query: 211 TPDDSGSALASESTRLRARQNVLYELGYFAGKLGRGKVLVLRKG--DIEIPSDLAGVLYT 268 TPDD E++ R NV++ELG G LG+ V + D IPSDLAG+ Sbjct: 121 TPDDISDIR--ENSVSVVRDNVIFELGLAIGILGKQNVFYIIPRGCDFHIPSDLAGITPG 178 Query: 269 ELDEHGG 275 + D + Sbjct: 179 DYDANRS 185 >UniRef50_Q0AJT7 Putative uncharacterized protein n=1 Tax=Nitrosomonas eutropha C91 RepID=Q0AJT7_NITEC Length = 242 Score = 76.3 bits (186), Expect = 1e-12, Method: Composition-based stats. Identities = 29/118 (24%), Positives = 48/118 (40%), Gaps = 5/118 (4%) Query: 153 KIFIVHGHDNDALQSVARFISRIGLEEIILSERPDGSRTIIEKFEAESGDVSFAIVLMTP 212 +FI HG + R+ L + P T + + A V+MT Sbjct: 106 NVFIGHGRSKVWRDLKDFIVERMRLPYDEFNRVPVAGITNTHRLNEMLDAAAIAFVVMTA 165 Query: 213 DDSGSALASESTRLRARQNVLYELGYFAGKLGRGKVLVLRKGDIEIPSDLAGVLYTEL 270 +D ++ AR NV++E+G F G+LG K +VL + E S++ G+ Sbjct: 166 EDE-----QADGKIEARTNVIHEVGLFQGRLGFTKAIVLLEEGCEEFSNIQGLGQIRF 218 >UniRef50_Q7MKB6 Putative uncharacterized protein VV1889 n=1 Tax=Vibrio vulnificus YJ016 RepID=Q7MKB6_VIBVY Length = 293 Score = 74.7 bits (182), Expect = 4e-12, Method: Composition-based stats. Identities = 27/102 (26%), Positives = 46/102 (45%), Gaps = 6/102 (5%) Query: 178 EEIILSERP-DGSRTIIEKFEAESGDVSFAIVLMTPDDSGSALASESTRLRARQNVLYEL 236 E + S+ + +++ + + AI +M+PDD E + R NVL+EL Sbjct: 33 EPTVWSQGVFNLTQSTLSDLLSALDTFDAAIFVMSPDDVVKMRGQE--QTVTRDNVLFEL 90 Query: 237 GYFAGKLGRGKVLVLRK---GDIEIPSDLAGVLYTELDEHGG 275 G F G+LG K +++ D +P+DL G+ D Sbjct: 91 GMFIGRLGPEKTFMVKPRNSQDFHVPTDLLGLTPGVYDNERS 132 >UniRef50_B3QDT6 Putative uncharacterized protein n=3 Tax=Rhodopseudomonas palustris RepID=B3QDT6_RHOPT Length = 291 Score = 74.7 bits (182), Expect = 4e-12, Method: Composition-based stats. Identities = 32/159 (20%), Positives = 60/159 (37%), Gaps = 16/159 (10%) Query: 148 RPVSRKIFIVHGHDNDALQSVARFISRIGLEEIILSE---RPDGSRT--IIEKFEAESGD 202 R + IF+VHG DN +S+ + + L+ + + R + + + Sbjct: 101 RTTGKTIFVVHGRDNALRESMFALLRALDLDPLEWDQAIRRARRGANPFVGDVIDTVMDQ 160 Query: 203 VSFAIVLMTPDDSGSALA----------SESTRLRARQNVLYELGYFAGKLGRGKVLVLR 252 +V++TPDD + +AR NVL+E G G+ K L+++ Sbjct: 161 AQAVLVMLTPDDLVQLKGVFVEPHELDTEGRQQSQARPNVLFEAGLAMGRH-PEKTLMVQ 219 Query: 253 KGDIEIPSDLAGVLYTELDEHGGWKRKLLSELAYAGVPF 291 G ++ SD+ G + + L+ L Sbjct: 220 IGHVKPFSDIGGRHMLRFNGSPASRNDLVGRLEMLRCDL 258 >UniRef50_C7PYD3 Putative uncharacterized protein n=1 Tax=Catenulispora acidiphila DSM 44928 RepID=C7PYD3_CATAD Length = 585 Score = 73.2 bits (178), Expect = 1e-11, Method: Composition-based stats. Identities = 41/171 (23%), Positives = 62/171 (36%), Gaps = 23/171 (13%) Query: 141 DPEPAVFRPVSRKIFIVHGHDNDALQSVARFISRIGLEEIILSER--------PDGSRTI 192 +PE A +F++HG D A + + GL + E P R + Sbjct: 397 NPEAAYQVTDKDTVFVIHGRDERARVATFDLLRAFGLHPVEWDEAVGLLQQPMPFLGRVL 456 Query: 193 IEKFEAESGDVSFAIVLMTPDDSGSALA----------SESTRLRARQNVLYELGYFAGK 242 E +V+MTPDD ++AR NVL ELG Sbjct: 457 REAIPR----AKAVVVIMTPDDIVRLHPELAGPSEPGFETGHSMQARPNVLIELGMALAY 512 Query: 243 LGRGKVLVLRKGDIEIPSDLAGVLYTELDEHGGWKRKLLSELAYAGVPFDK 293 R L+L+ GD +DL G Y + E ++ ++ L+YA Sbjct: 513 HPRA-TLILQVGDHRPIADLGGFNYVRVAEGTAFRERIGKRLSYADCRVSM 562 >UniRef50_Q9X882 Putative uncharacterized protein SCO3290 n=1 Tax=Streptomyces coelicolor RepID=Q9X882_STRCO Length = 249 Score = 73.2 bits (178), Expect = 1e-11, Method: Composition-based stats. Identities = 38/169 (22%), Positives = 61/169 (36%), Gaps = 16/169 (9%) Query: 138 NQHDPEPAVFRPVSRKIFIVHGHDNDALQSVARFISRIGLEEIILSE----RPDGSRTII 193 P P +R +F+VHG D+ + + + R+ L + S + Sbjct: 61 RPAAPVPG-DAERARSVFVVHGRDDQVRREMYELLRRLDLRPKEWEDLVRATGQASPFLG 119 Query: 194 EKFEAESGDVSFAIVLMTPDDS--------GSALASESTRL--RARQNVLYELGYFAGKL 243 + A+VL+TPDD G TR + R NVL ELG Sbjct: 120 DVVAGAPAQAQAALVLLTPDDVVTLHPELRGHNEPDHETRPVCQPRPNVLIELGMVLMAY 179 Query: 244 GRGKVLVLRKGDIEIPSDLAGVLYTELDEHGGWKRKLLSELAYAGVPFD 292 + L++ G + +D+AG D K++ L AG + Sbjct: 180 -PERTLIVEVGGVRPIADIAGRNVIRFDGSDTALGKVVERLKLAGCTVN 227 >UniRef50_C6JHS1 Predicted protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JHS1_9FIRM Length = 318 Score = 73.2 bits (178), Expect = 1e-11, Method: Composition-based stats. Identities = 30/144 (20%), Positives = 56/144 (38%), Gaps = 14/144 (9%) Query: 167 SVARFISRIGLEEIILSERP--DGSRTIIEKFEAESGDVSFAIVLMTPDDSGSALASEST 224 V ++ + +E ++ +E + S +V A+ + DD Sbjct: 17 EVGSWLESMNVEPVLWNEPEVFPLGVYTWDALIDLSKNVDAAVFIFGEDDK--IWFRGEG 74 Query: 225 RLRARQNVLYELGYFAGKLGRGKVLVLRKGDIEIPSDLAGVLYTELDEHGGWKRKLLSEL 284 + R NVL E G F+GKL + + L +G ++ SDL G+ + ++ + K KL + + Sbjct: 75 TMTVRDNVLLEYGLFSGKLSKVNTIFLCEGRPKLASDLEGITWGDVGKKNSAKIKLKNWI 134 Query: 285 ---------AYAGVPF-DKDKALS 298 G D + A Sbjct: 135 NSIRTNNQKKVEGFKITDLNDAFQ 158 >UniRef50_Q027G3 Nucleotide-binding protein n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q027G3_SOLUE Length = 316 Score = 71.2 bits (173), Expect = 4e-11, Method: Composition-based stats. Identities = 23/95 (24%), Positives = 41/95 (43%), Gaps = 2/95 (2%) Query: 176 GLEEIILSERPDGSRTIIEKFEAESGDVSFAIVLMTPDDSGSALASESTRLRARQNVLYE 235 +E ++ +E E E A+ + + DD + RA NV+ E Sbjct: 29 DIEPVLWTEIFHPGLLTFEALENVLLRCCAAVFVASADDVTTFRGQCIHTPRA--NVMLE 86 Query: 236 LGYFAGKLGRGKVLVLRKGDIEIPSDLAGVLYTEL 270 G AG++GR + + G ++PSDL G+ ++ Sbjct: 87 FGLVAGRIGRHSIALCLAGGAQLPSDLQGLTVIDM 121 >UniRef50_B7L3G5 Cyclic nucleotide-binding n=1 Tax=Methylobacterium chloromethanicum CM4 RepID=B7L3G5_METC4 Length = 300 Score = 69.7 bits (169), Expect = 1e-10, Method: Composition-based stats. Identities = 25/101 (24%), Positives = 43/101 (42%), Gaps = 4/101 (3%) Query: 176 GLEEIILSERPDGSRTIIEKFEAESGDVSFAIVLMTPDDSGSALASESTRLRARQNVLYE 235 +E + + S ++ E F + +M DD ++ E R NV+ E Sbjct: 179 DIEVEVWEQIFAISSYPLDALEEAMKRADFVVAIMRGDDI--VVSREMESRAPRDNVILE 236 Query: 236 LGYFAGKLGRGKVLVLRKGDI--EIPSDLAGVLYTELDEHG 274 G GKLGR + L++ +I ++ SD +G+ Y E Sbjct: 237 YGMALGKLGRNRTLMMVPKEIQTKLASDNSGLTYVPYTERD 277 >UniRef50_B1WT66 Putative uncharacterized protein n=1 Tax=Cyanothece sp. ATCC 51142 RepID=B1WT66_CYAA5 Length = 891 Score = 68.9 bits (167), Expect = 2e-10, Method: Composition-based stats. Identities = 33/153 (21%), Positives = 54/153 (35%), Gaps = 9/153 (5%) Query: 113 IIESIRKFTSSLVAPFVRDYQLYVENQHDPEPAVFRPVSRKIFIVHGHD--NDALQSVAR 170 II + L D L + + + + K+FI + N A V Sbjct: 682 IIIQEDLQLNQLAKFLHLDISLGKGTKSSARKTMSQ-IPPKVFIGSSSEYLNIANTVVQL 740 Query: 171 FISRIGLEEIILSERPDGS----RTIIEKFEAESGDVSFAIVLMTPDDSGSALASESTRL 226 + ++ + +T +E E F I ++ PDD + E Sbjct: 741 LAEDPNIHPVLWKDSDSFGAFGLQTPLESLEDVVNKYDFGIFILAPDDDRLSRGREEKV- 799 Query: 227 RARQNVLYELGYFAGKLGRGKVLVLRKGDIEIP 259 AR NV++ELG F GK R V ++ + P Sbjct: 800 -ARDNVIFELGLFMGKKTRKGVFIIMPQYLIDP 831 >UniRef50_Q0YSC4 Putative uncharacterized protein n=1 Tax=Chlorobium ferrooxidans DSM 13031 RepID=Q0YSC4_9CHLB Length = 253 Score = 65.9 bits (159), Expect = 2e-09, Method: Composition-based stats. Identities = 26/128 (20%), Positives = 59/128 (46%), Gaps = 2/128 (1%) Query: 138 NQHDPEPAVFRPVSRKIFIVHGHDNDALQSVARFISRIGLEEIILSERPDGSRTIIEKFE 197 + +P P ++K+FI HG + ++ + + +S +E ++ E+ S+ + EK Sbjct: 99 SPQNPIPVTPAQNNKKVFITHGKNKTFIEPIKKLLSFGEMEPVVSVEKQSVSQPVPEKVM 158 Query: 198 AESGDVSFAIVLMTPDDSGSALASESTRLRARQNVLYELGYFAGKLGRGKVLVLRKGDIE 257 + + AI + D+ + NVL E+G + + +++ K ++ Sbjct: 159 HDMRECGAAI-IHVEDELTLLDKDAKEHVMLNPNVLIEIGAAMALY-KKRFILIVKEGVK 216 Query: 258 IPSDLAGV 265 +PS+L G+ Sbjct: 217 LPSNLQGL 224 >UniRef50_A5KMN9 Putative uncharacterized protein n=1 Tax=Ruminococcus torques ATCC 27756 RepID=A5KMN9_9FIRM Length = 323 Score = 65.1 bits (157), Expect = 3e-09, Method: Composition-based stats. Identities = 25/96 (26%), Positives = 41/96 (42%) Query: 187 DGSRTIIEKFEAESGDVSFAIVLMTPDDSGSALASESTRLRARQNVLYELGYFAGKLGRG 246 D + + +S +AI + DD + + + AR NV E G +AG L Sbjct: 46 DLGQCTYHELLKKSLSFDYAIFIGGKDDYVRRESDRTHKYAARDNVYLEFGLYAGILTYA 105 Query: 247 KVLVLRKGDIEIPSDLAGVLYTELDEHGGWKRKLLS 282 + L + +I SDL GV D+ +K+L+ Sbjct: 106 RCFFLIQEGCQIASDLLGVNVVFFDKMQDLSKKILT 141 >UniRef50_Q12DK8 Putative uncharacterized protein n=5 Tax=cellular organisms RepID=Q12DK8_POLSJ Length = 433 Score = 63.9 bits (154), Expect = 7e-09, Method: Composition-based stats. Identities = 35/163 (21%), Positives = 67/163 (41%), Gaps = 25/163 (15%) Query: 138 NQHDPEPAVFR---PVSRKIFIVHGHDNDALQSVARFISRIGLEEIILSERPDGSRTIIE 194 ++ DP + P +R + G D A F+ ++GLE +L ++ Sbjct: 293 SKADPSSITAQQAVPGTRVAVLGWGGD--AAGQACEFMEQLGLEAAVLD------TVSVD 344 Query: 195 KFEAESGDVSFAIVLMTPDDSGSALASESTRLRARQNVLYELGYFAGKLGRGKVLVLRKG 254 + +A +V+F ++L + A + +G+ LGR +++ L Sbjct: 345 QLDA-LRNVAFLLLLPGEEPEAPAA-------------MLAIGFMLAVLGRSRIVCLLSD 390 Query: 255 DIEIPSDLAGVLYTELDEHGGWKRKLLSELAYAGVPFDKDKAL 297 +P L G +DE G W+ L E+ AG+ D ++A+ Sbjct: 391 QEALPDALKGATRITVDEAGLWRLLLAREMKRAGLDVDLNRAI 433 >UniRef50_C7RC53 Putative uncharacterized protein n=1 Tax=Kangiella koreensis DSM 16069 RepID=C7RC53_KANKD Length = 365 Score = 61.6 bits (148), Expect = 3e-08, Method: Composition-based stats. Identities = 27/144 (18%), Positives = 63/144 (43%), Gaps = 4/144 (2%) Query: 130 RDYQLYVENQHDPEPAVFRPV--SRKIFIVHGHDNDALQSVARFISRIGLEEIILSERPD 187 + + ++ EP +PV + +FI HG + +Q + ++ ++ E+ Sbjct: 204 EHFARRIAENNESEPKPVKPVQRNSNVFISHGKNKKVVQQLKELLTFGKFNPVVSVEKET 263 Query: 188 GSRTIIEKFEAESGDVSFAIVLMTPDDSGSALASESTRLRARQNVLYELGYFAGKLGRGK 247 S + EK + + S A++ + + + + +NVL E+G + Sbjct: 264 ASIPVPEKVFEDMRECSAAVIHLEAEQE-LLDPEGNKHSKINENVLIEIGAAIALYNK-N 321 Query: 248 VLVLRKGDIEIPSDLAGVLYTELD 271 ++L K +++PS+L G+ +E + Sbjct: 322 FVLLVKKGVKLPSNLQGLYRSEYE 345 >UniRef50_C3DUD7 Putative uncharacterized protein n=1 Tax=Bacillus thuringiensis serovar sotto str. T04001 RepID=C3DUD7_BACTS Length = 136 Score = 60.1 bits (144), Expect = 1e-07, Method: Composition-based stats. Identities = 21/50 (42%), Positives = 30/50 (60%) Query: 139 QHDPEPAVFRPVSRKIFIVHGHDNDALQSVARFISRIGLEEIILSERPDG 188 + P+ ++K+FIVHGHD SVARF+ R+ L+ IIL E+ G Sbjct: 87 KLSVSPSSTEIDNKKVFIVHGHDESVKISVARFLERLDLKPIILHEQASG 136 >UniRef50_Q54R22 Putative uncharacterized protein n=1 Tax=Dictyostelium discoideum RepID=Q54R22_DICDI Length = 251 Score = 55.1 bits (131), Expect = 3e-06, Method: Composition-based stats. Identities = 20/114 (17%), Positives = 46/114 (40%), Gaps = 4/114 (3%) Query: 138 NQHDPEPAVFRPVSRKIFIVHGHDNDALQSVARFISRIGLEEIILSERPDGSRTIIEKFE 197 + P K +V+G++ + ++ + + + ++L + +T I+ FE Sbjct: 101 DADGANTTQQTPKKLKALVVNGNNE-IQEKYSKMLEDMNISIVLLESK--NGKTDIKNFE 157 Query: 198 AESGDVSFAIVLMTPDDSGSALASESTRLRARQNVLYELGYFAGKLGRGKVLVL 251 F +V +T D S R N+++E+G G +G+ + + Sbjct: 158 KIIDGCDFCLVFVTY-DLESHDPEYEEHYYPRFNLIFEMGLLYGLMGKNNTIYV 210 >UniRef50_A0KZC7 Putative uncharacterized protein n=1 Tax=Shewanella sp. ANA-3 RepID=A0KZC7_SHESA Length = 343 Score = 46.2 bits (108), Expect = 0.001, Method: Composition-based stats. Identities = 34/148 (22%), Positives = 58/148 (39%), Gaps = 27/148 (18%) Query: 162 NDALQSVARFIS-----RIGLEEIILSERPDGSRTIIEKFEAESGDVSFAIVLMTPDDSG 216 A++ + + + R+ + + PD + TI+ K E + D Sbjct: 25 ERAIKQLNQDLKIEDALRLDHDTKDVQGSPDIASTILSKIEKSDIFIG---------DIT 75 Query: 217 SALASESTRLRARQNVLYELGYFAGKLGRGKVLVLRKGDI-----EIPSDLAG----VLY 267 SE+ + NVL ELGY +LG G+V+ + +P DLA ++Y Sbjct: 76 FITKSENEKYCPNPNVLIELGYALSRLGDGRVINIMNSSFGSPDKNLPFDLAHKRWPIVY 135 Query: 268 TELDEHGGWKRKLLSEL----AYAGVPF 291 D++ K + +EL A PF Sbjct: 136 NLSDDNYADKATVRNELIASFKSALYPF 163 >UniRef50_Q54KI8 Putative uncharacterized protein n=1 Tax=Dictyostelium discoideum RepID=Q54KI8_DICDI Length = 132 Score = 44.3 bits (103), Expect = 0.005, Method: Composition-based stats. Identities = 18/94 (19%), Positives = 41/94 (43%), Gaps = 6/94 (6%) Query: 171 FISRIGLEEIILSERPDGSRT-IIEKFEAESGDVSFAIVLMTPDDSGSALASE-----ST 224 + ++ ++ II+ + + T I+ E E F I+L+T ++ + Sbjct: 1 MLIKLKIDMIIVPQNDNSEFTKSIDTIEKEVKKCDFCIILITYENRFFKKTNNFFEAYQE 60 Query: 225 RLRARQNVLYELGYFAGKLGRGKVLVLRKGDIEI 258 ++ ++L E+GY G+ K +++ IE Sbjct: 61 MVQPNLSLLLEMGYLISHFGKQKTIIVEFSPIEK 94 >UniRef50_B1KM00 TIR protein n=3 Tax=Proteobacteria RepID=B1KM00_SHEWM Length = 291 Score = 43.9 bits (102), Expect = 0.007, Method: Composition-based stats. Identities = 29/146 (19%), Positives = 58/146 (39%), Gaps = 10/146 (6%) Query: 150 VSRKIFIVHGH-DNDALQSVARFISRIGLEEIILSERPDGSRTIIEKFEAESGDVSFAIV 208 ++ +F+ H H D D ++ +AR + G+ + ++I+K V F V Sbjct: 1 MTISVFLSHNHSDKDFIRKLARDLESHGVRYWLDEAEMKIGDSLIQKIREGIDSVDFFAV 60 Query: 209 LMTPDDSGSALASESTRLRARQNVLYELGYFAGKLGRGKVLVLRKGDIEIPSDLAGVLYT 268 +++P+ + + Q + GK KVL + + E+P L G LY Sbjct: 61 VLSPNSVEAPWVVNELDVAMNQQI-------NGK--PIKVLPILLKECELPGFLVGKLYG 111 Query: 269 ELDEHGGWKRKLLSELAYAGVPFDKD 294 + ++ + G+ F+K Sbjct: 112 DFQNEAQYEDSFRILINSIGLVFNKS 137 >UniRef50_C5V3F2 Putative uncharacterized protein n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V3F2_9PROT Length = 258 Score = 42.7 bits (99), Expect = 0.015, Method: Composition-based stats. Identities = 24/138 (17%), Positives = 49/138 (35%), Gaps = 10/138 (7%) Query: 152 RKIFIVHGH-DNDALQSVARFISRIGLEEIILSERPDGSRTIIEKFEAESGDVSFAIVLM 210 IF+ H H D + +A + + G I + ++IEK +V + ++ Sbjct: 2 SSIFLSHSHADKPFARKLAADLRKAGHAVWIDEAEINIGDSLIEKIRDGLDEVDYVAAIL 61 Query: 211 TPDDSGSALASESTRLRARQNVLYELGYFAGKLGRGKVLVLRKGDIEIPSDLAGVLYTEL 270 + S + + + + + + R VL L +E+P L G Y + Sbjct: 62 SSASIASPWITRELDIASNREIEEK---------RVVVLPLLLEQVELPGFLKGKFYGDF 112 Query: 271 DEHGGWKRKLLSELAYAG 288 + + L + G Sbjct: 113 TDSSRYDEMLALLVRKLG 130 >UniRef50_Q2F9V3 Putative uncharacterized protein n=1 Tax=Vibrio sp. DAT722 RepID=Q2F9V3_9VIBR Length = 318 Score = 40.8 bits (94), Expect = 0.057, Method: Composition-based stats. Identities = 28/100 (28%), Positives = 43/100 (43%), Gaps = 20/100 (20%) Query: 173 SRIGLEEII------LSERPDGSRTIIEKFEAESGDVSFAIVLMTPDDSGSALASESTRL 226 LE +I ++ PD S++I K + S V D S + +L Sbjct: 36 KDFSLEPVIDRDTLGVAGSPDISQSIFSKIDNASVFV---------CDV-SIINQGQDKL 85 Query: 227 RARQNVLYELGYFAGKLGRGKVLVLRKGDI----EIPSDL 262 NVL ELGY GKLG +++++ + E+P DL Sbjct: 86 SPNPNVLIELGYAIGKLGWERIIMIMNTEYGSPTELPFDL 125 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_Q9JMR6 Uncharacterized protein yuaY n=6 Tax=Enterobacte... 343 5e-93 UniRef50_B0UF11 Nucleotide-binding protein-like protein containi... 332 8e-90 UniRef50_UPI0001A454BD nucleotide-binding protein n=1 Tax=Neisse... 318 1e-85 UniRef50_A4JRY7 Nucleotide-binding protein containing TIR-like d... 256 7e-67 UniRef50_B3QLE0 Nucleotide-binding protein containing TIR-like p... 228 3e-58 UniRef50_A4C149 Putative nucleotide-binding protein containing T... 218 1e-55 UniRef50_D0LNL0 Nucleotide-binding protein, predicted, TIR-like ... 197 4e-49 UniRef50_B1KWG1 YebB n=1 Tax=Clostridium botulinum A3 str. Loch ... 196 9e-49 UniRef50_B1ZZI8 Nucleotide-binding protein containing TIR-like p... 191 2e-47 UniRef50_Q0HFN8 Nucleotide-binding protein containing TIR-like d... 191 3e-47 UniRef50_B1B7E7 Putative uncharacterized protein n=1 Tax=Clostri... 187 3e-46 UniRef50_Q21MV2 Nucleotide-binding protein containing TIR-like p... 184 4e-45 UniRef50_A5EGX1 Putative uncharacterized protein n=1 Tax=Bradyrh... 184 4e-45 UniRef50_C0PW38 Putative uncharacterized protein n=3 Tax=Salmone... 183 9e-45 UniRef50_Q8EDI5 Putative uncharacterized protein n=1 Tax=Shewane... 182 1e-44 UniRef50_UPI0001C33D0E hypothetical protein CATC2_14735 n=1 Tax=... 182 1e-44 UniRef50_A1SX31 Putative nucleotide-binding protein containing T... 180 6e-44 UniRef50_Q6D353 Putative uncharacterized protein n=2 Tax=Gammapr... 178 3e-43 UniRef50_B0UTQ9 Putative nucleotide-binding protein containing T... 174 4e-42 UniRef50_Q4C066 Similar to nucleotide-binding protein containing... 173 1e-41 UniRef50_A3CWB8 Nucleotide-binding protein containing TIR-like d... 172 2e-41 UniRef50_A1ZY85 Putative uncharacterized protein n=1 Tax=Microsc... 171 3e-41 UniRef50_A4CFM1 Predicted nucleotide-binding protein n=2 Tax=Gam... 170 5e-41 UniRef50_B8EAL8 Putative uncharacterized protein n=1 Tax=Shewane... 169 9e-41 UniRef50_D1VA94 Putative uncharacterized protein n=1 Tax=Frankia... 168 2e-40 UniRef50_A6AKB0 YebB n=1 Tax=Vibrio harveyi HY01 RepID=A6AKB0_VIBHA 168 2e-40 UniRef50_C1DBI6 Putative uncharacterized protein n=1 Tax=Laribac... 168 3e-40 UniRef50_A1ZY86 Putative uncharacterized protein n=1 Tax=Microsc... 168 3e-40 UniRef50_Q0YR18 Nucleotide-binding protein containing TIR-like d... 165 1e-39 UniRef50_Q8D9V5 Predicted nucleotide-binding protein n=1 Tax=Vib... 164 3e-39 UniRef50_C8PV46 Putative uncharacterized protein n=1 Tax=Enhydro... 161 2e-38 UniRef50_C7H3F1 Putative uncharacterized protein n=1 Tax=Faecali... 161 3e-38 UniRef50_Q3R8P5 Putative uncharacterized protein n=1 Tax=Xylella... 159 7e-38 UniRef50_B4S624 Nucleotide-binding protein containing TIR-like p... 158 2e-37 UniRef50_Q1NBU8 Putative uncharacterized protein n=1 Tax=Sphingo... 158 3e-37 UniRef50_C6M8A7 Putative uncharacterized protein n=1 Tax=Neisser... 156 7e-37 UniRef50_Q120Z2 Putative uncharacterized protein n=1 Tax=Polarom... 153 5e-36 UniRef50_B7M8G7 Putative uncharacterized protein n=2 Tax=Escheri... 153 1e-35 UniRef50_B2I7C5 Putative uncharacterized protein n=8 Tax=Proteob... 147 4e-34 UniRef50_C3L6B4 Conserved domain protein n=10 Tax=Bacillus anthr... 145 2e-33 UniRef50_Q3SKL0 Putative uncharacterized protein n=2 Tax=Betapro... 141 2e-32 UniRef50_B2IV30 Putative uncharacterized protein n=2 Tax=Bacteri... 138 2e-31 UniRef50_Q54F65 Protein tirC n=1 Tax=Dictyostelium discoideum Re... 130 5e-29 UniRef50_UPI0001BC92F3 hypothetical protein PsyrptA_06199 n=1 Ta... 128 2e-28 UniRef50_A4EPJ5 Putative uncharacterized protein n=1 Tax=Roseoba... 127 3e-28 UniRef50_C1BE84 Putative uncharacterized protein n=1 Tax=Rhodoco... 127 5e-28 UniRef50_Q98RD6 Putative uncharacterized protein MYPU_0730 n=1 T... 124 5e-27 UniRef50_C6AF08 Putative nucleotide-binding protein n=1 Tax=Bart... 123 8e-27 UniRef50_C2LG65 Putative uncharacterized protein n=1 Tax=Proteus... 120 6e-26 UniRef50_Q24ZU3 Putative uncharacterized protein n=1 Tax=Desulfi... 115 2e-24 UniRef50_Q0AJT7 Putative uncharacterized protein n=1 Tax=Nitroso... 114 5e-24 UniRef50_Q3RAE9 Similar to nucleotide-binding protein containing... 112 1e-23 UniRef50_A4AGR7 Putative uncharacterized protein n=1 Tax=marine ... 112 1e-23 UniRef50_B2FIX1 Putative uncharacterized protein n=1 Tax=Stenotr... 112 2e-23 UniRef50_Q6AL85 Putative uncharacterized protein n=1 Tax=Desulfo... 111 4e-23 UniRef50_C5BHR5 Putative uncharacterized protein n=1 Tax=Teredin... 110 6e-23 UniRef50_A3EJX2 SH3 domain protein n=2 Tax=Vibrionaceae RepID=A3... 110 7e-23 UniRef50_Q480E8 Conserved domain protein n=5 Tax=Gammaproteobact... 109 1e-22 UniRef50_A3INK0 Putative uncharacterized protein n=1 Tax=Cyanoth... 108 3e-22 UniRef50_C7PYD3 Putative uncharacterized protein n=1 Tax=Catenul... 107 3e-22 UniRef50_C9PBW9 Putative uncharacterized protein n=2 Tax=Vibrio ... 107 3e-22 UniRef50_C6N7T4 Putative uncharacterized protein n=1 Tax=Legione... 107 4e-22 UniRef50_A7G517 Conserved domain protein n=3 Tax=Clostridium bot... 107 5e-22 UniRef50_C1F5N0 Cyclic nucleotide-binding domain protein n=2 Tax... 107 7e-22 UniRef50_B9TGA1 Putative uncharacterized protein n=1 Tax=Ricinus... 107 7e-22 UniRef50_C3DUD8 Nucleotide-binding protein containing TIR-like d... 105 2e-21 UniRef50_C5CLS5 TPR repeat-containing protein n=1 Tax=Variovorax... 103 7e-21 UniRef50_C7R666 Nucleotide-binding protein containing TIR-like d... 103 8e-21 UniRef50_Q9X882 Putative uncharacterized protein SCO3290 n=1 Tax... 103 1e-20 UniRef50_A9A6G6 Tetratricopeptide domain protein n=1 Tax=Methano... 101 2e-20 UniRef50_C6JHS1 Predicted protein n=1 Tax=Ruminococcus sp. 5_1_3... 101 3e-20 UniRef50_C4ZIE6 Putative uncharacterized protein n=1 Tax=Thauera... 101 5e-20 UniRef50_B0PHL7 Putative uncharacterized protein n=1 Tax=Anaerot... 100 6e-20 UniRef50_B3QDT6 Putative uncharacterized protein n=3 Tax=Rhodops... 100 7e-20 UniRef50_A3IZP6 Putative uncharacterized protein n=1 Tax=Cyanoth... 100 7e-20 UniRef50_Q027G3 Nucleotide-binding protein n=1 Tax=Candidatus So... 100 8e-20 UniRef50_B1WT66 Putative uncharacterized protein n=1 Tax=Cyanoth... 99 1e-19 UniRef50_A5KMN9 Putative uncharacterized protein n=1 Tax=Ruminoc... 99 2e-19 UniRef50_C6MH81 Nucleotide-binding protein containing TIR-like d... 99 2e-19 UniRef50_Q0YSC4 Putative uncharacterized protein n=1 Tax=Chlorob... 97 7e-19 UniRef50_Q7MKB6 Putative uncharacterized protein VV1889 n=1 Tax=... 97 8e-19 UniRef50_B1M988 Cyclic nucleotide-binding n=4 Tax=Proteobacteria... 96 1e-18 UniRef50_Q8TKX7 Predicted protein n=1 Tax=Methanosarcina acetivo... 96 2e-18 UniRef50_B7L3G5 Cyclic nucleotide-binding n=1 Tax=Methylobacteri... 96 2e-18 UniRef50_Q12DK8 Putative uncharacterized protein n=5 Tax=cellula... 96 2e-18 UniRef50_C7RC53 Putative uncharacterized protein n=1 Tax=Kangiel... 95 2e-18 UniRef50_B5JSV8 YebB n=4 Tax=Proteobacteria RepID=B5JSV8_9GAMM 93 1e-17 UniRef50_C6W705 Nucleotide-binding protein containing TIR-like d... 85 3e-15 UniRef50_A4Z1J6 Putative uncharacterized protein n=2 Tax=Rhizobi... 82 2e-14 UniRef50_Q54R22 Putative uncharacterized protein n=1 Tax=Dictyos... 77 7e-13 UniRef50_Q212T3 Putative uncharacterized protein n=1 Tax=Rhodops... 75 3e-12 UniRef50_A0KZC7 Putative uncharacterized protein n=1 Tax=Shewane... 73 1e-11 UniRef50_C3DUD7 Putative uncharacterized protein n=1 Tax=Bacillu... 52 2e-05 Sequences not found previously or not previously below threshold: UniRef50_B4S6V8 Putative uncharacterized protein n=1 Tax=Prosthe... 46 0.002 UniRef50_Q2F9V3 Putative uncharacterized protein n=1 Tax=Vibrio ... 46 0.002 UniRef50_D2ERD7 Putative uncharacterized protein n=1 Tax=Strepto... 45 0.004 UniRef50_Q3M574 Putative uncharacterized protein n=1 Tax=Anabaen... 43 0.010 UniRef50_Q54KI8 Putative uncharacterized protein n=1 Tax=Dictyos... 42 0.016 UniRef50_B9JNX7 Putative uncharacterized protein n=1 Tax=Agrobac... 42 0.020 UniRef50_C5SF52 Putative uncharacterized protein n=1 Tax=Asticca... 42 0.022 UniRef50_C5V3F2 Putative uncharacterized protein n=1 Tax=Gallion... 42 0.025 UniRef50_D1LX78 Neuralized PATS1 n=1 Tax=Saccoglossus kowalevski... 41 0.074 >UniRef50_Q9JMR6 Uncharacterized protein yuaY n=6 Tax=Enterobacteriaceae RepID=YUAY_ECOLI Length = 299 Score = 343 bits (879), Expect = 5e-93, Method: Composition-based stats. Identities = 299/299 (100%), Positives = 299/299 (100%) Query: 1 MAIDIFQSLKNCVFDLQRADVQNYQQPLKQLARLLNSENLQSVNAHLTRNVELDTFLARS 60 MAIDIFQSLKNCVFDLQRADVQNYQQPLKQLARLLNSENLQSVNAHLTRNVELDTFLARS Sbjct: 1 MAIDIFQSLKNCVFDLQRADVQNYQQPLKQLARLLNSENLQSVNAHLTRNVELDTFLARS 60 Query: 61 EDTESSMAGSAVLQWPDEPADILGLKLLLIEKMADDNNFSFNFCHTFFYDRNIIESIRKF 120 EDTESSMAGSAVLQWPDEPADILGLKLLLIEKMADDNNFSFNFCHTFFYDRNIIESIRKF Sbjct: 61 EDTESSMAGSAVLQWPDEPADILGLKLLLIEKMADDNNFSFNFCHTFFYDRNIIESIRKF 120 Query: 121 TSSLVAPFVRDYQLYVENQHDPEPAVFRPVSRKIFIVHGHDNDALQSVARFISRIGLEEI 180 TSSLVAPFVRDYQLYVENQHDPEPAVFRPVSRKIFIVHGHDNDALQSVARFISRIGLEEI Sbjct: 121 TSSLVAPFVRDYQLYVENQHDPEPAVFRPVSRKIFIVHGHDNDALQSVARFISRIGLEEI 180 Query: 181 ILSERPDGSRTIIEKFEAESGDVSFAIVLMTPDDSGSALASESTRLRARQNVLYELGYFA 240 ILSERPDGSRTIIEKFEAESGDVSFAIVLMTPDDSGSALASESTRLRARQNVLYELGYFA Sbjct: 181 ILSERPDGSRTIIEKFEAESGDVSFAIVLMTPDDSGSALASESTRLRARQNVLYELGYFA 240 Query: 241 GKLGRGKVLVLRKGDIEIPSDLAGVLYTELDEHGGWKRKLLSELAYAGVPFDKDKALSA 299 GKLGRGKVLVLRKGDIEIPSDLAGVLYTELDEHGGWKRKLLSELAYAGVPFDKDKALSA Sbjct: 241 GKLGRGKVLVLRKGDIEIPSDLAGVLYTELDEHGGWKRKLLSELAYAGVPFDKDKALSA 299 >UniRef50_B0UF11 Nucleotide-binding protein-like protein containing TIR-like domain n=3 Tax=Proteobacteria RepID=B0UF11_METS4 Length = 301 Score = 332 bits (851), Expect = 8e-90, Method: Composition-based stats. Identities = 148/293 (50%), Positives = 199/293 (67%), Gaps = 1/293 (0%) Query: 4 DIFQSLKNCVFDLQRADVQNYQQPLKQLARLLNSENLQSVNAHLTRNVELDTFLARSEDT 63 D+F + N V DLQ A +Q +++PLK LARLL S +LQ +N LT V+ + F+A SE T Sbjct: 6 DVFTQINNAVLDLQGAHLQGFERPLKTLARLLQSPDLQDINRELTSGVDYEGFIAASEAT 65 Query: 64 ESSMAGSAVLQWPDEPADILGLKLLLIEKMADDNNFSFNFCHTFFYDRN-IIESIRKFTS 122 M GS L WP++ LGL L+LIEK+A + + NF H FFY N +I + Sbjct: 66 IGGMVGSGNLVWPEDQKQTLGLTLILIEKLAAEPGHALNFAHNFFYSGNKLIAGLHSLVG 125 Query: 123 SLVAPFVRDYQLYVENQHDPEPAVFRPVSRKIFIVHGHDNDALQSVARFISRIGLEEIIL 182 ++ PF RDY+ YV ++ D +P + + S K+FIVHGHD+ ALQ +ARFI ++GLE I+L Sbjct: 126 QVLIPFARDYKAYVLSRGDVQPRLVQAASNKVFIVHGHDDAALQGLARFIEKLGLEAIVL 185 Query: 183 SERPDGSRTIIEKFEAESGDVSFAIVLMTPDDSGSALASESTRLRARQNVLYELGYFAGK 242 E+PD RTIIEKFE + DV +A+VL+TPDD G A +E RARQNV++ELGYFAG+ Sbjct: 186 KEQPDQGRTIIEKFEQSATDVGYAVVLLTPDDMGGAKTTEEQDTRARQNVIFELGYFAGR 245 Query: 243 LGRGKVLVLRKGDIEIPSDLAGVLYTELDEHGGWKRKLLSELAYAGVPFDKDK 295 LGRG+V +L+KG IEIPSDL GV+YTE+D GWK +L+ EL A + FD + Sbjct: 246 LGRGRVCLLKKGRIEIPSDLFGVIYTEMDPSDGWKARLVGELKAAKLDFDANS 298 >UniRef50_UPI0001A454BD nucleotide-binding protein n=1 Tax=Neisseria subflava NJ9703 RepID=UPI0001A454BD Length = 301 Score = 318 bits (815), Expect = 1e-85, Method: Composition-based stats. Identities = 124/299 (41%), Positives = 175/299 (58%), Gaps = 6/299 (2%) Query: 1 MAIDIFQSLKNCVFDLQRADVQNYQQPLKQLARLLNSENLQSVNAHLTRNVELDTFLARS 60 M +DIF+ + N + DLQ +++Q ++ LK+L LLN E L+ N LT N+ L+ L S Sbjct: 1 MGLDIFEEINNAILDLQSSELQTFEWSLKRLNELLNDEVLKVHNDELTENLNLEKLLEDS 60 Query: 61 EDTESSMAGSAVLQWPDEPADILGLKLLLIEKMADDNNFSFNFCHTFFYDRN-IIESIRK 119 +T S GS+ L P + + LG +LL+ +++D N +FCH +FY N II I Sbjct: 61 SNTGGSFVGSSKLLLPTDMKERLGYIILLVNWLSNDTNEVLDFCHHYFYSGNKIIAGIHS 120 Query: 120 FTSSLVAPFVRDYQLYVENQ-HDPEPAVFRPVSRKIFIVHGHDNDALQSVARFISRIGLE 178 F ++ PF RDY+ Y+ + + E VS +FIVHG D+ VAR I ++GL Sbjct: 121 FNRQVLIPFARDYKNYITRKGANMEVKSSSIVSNNVFIVHGRDDLLKVEVARLIEKLGLS 180 Query: 179 EIILSERPDGSRTIIEKFEAESGDVSFAIVLMTPDDSGSAL---ASESTRLRARQNVLYE 235 IIL E+P+ +TIIEK E + +V F IVL TP D G + RARQNV++E Sbjct: 181 AIILHEQPNSGKTIIEKIEEYT-NVGFGIVLYTPCDIGGQKLSNLDTDLKPRARQNVVFE 239 Query: 236 LGYFAGKLGRGKVLVLRKGDIEIPSDLAGVLYTELDEHGGWKRKLLSELAYAGVPFDKD 294 GY GKLGR KV L K ++E PSD++GV+Y ++D+ GGWK KL EL AG D + Sbjct: 240 HGYLIGKLGRNKVCALVKEEVEFPSDISGVVYQKVDDAGGWKLKLAIELKQAGYSIDLN 298 >UniRef50_A4JRY7 Nucleotide-binding protein containing TIR-like domain-like n=3 Tax=Burkholderia RepID=A4JRY7_BURVG Length = 377 Score = 256 bits (653), Expect = 7e-67, Method: Composition-based stats. Identities = 99/293 (33%), Positives = 140/293 (47%), Gaps = 12/293 (4%) Query: 16 LQRADVQNYQQPLKQLARLLNSENLQSVNAHLTRNVELDTFLARSEDTESSMAGSAVLQW 75 L Q Q A L ++++ L ++ E M A L Sbjct: 88 LSEVGTQPSQPTTTMKAAHLQ-QDIERGITRLQERIDALKAFDFQTLKEGIMPELAALSA 146 Query: 76 P--DEPADILGLKLLLIEKM----ADDNNFSFNFCHTFFYDRNIIESIRKFTSSLVAPFV 129 D G + A ++ + FY R + +L+ Sbjct: 147 AIADTLERCFGKDTTAYRRYRAATALRPIQPKSYGNNEFYLRQEARENFDRSVALLQDAQ 206 Query: 130 RDYQLYVENQHDPEPAVFRP---VSRKIFIVHGHDNDALQSVARFISRIGLEEIILSERP 186 R + +E+ P P +SR++F+VHGHD A ++VARF+ +I E IIL E+ Sbjct: 207 RALREDLEDAEHAAPQPIVPAAALSRRVFVVHGHDEGAREAVARFLEKIDFEAIILHEKA 266 Query: 187 DGSRTIIEKFEAESGDVSFAIVLMTPDDSGSALASESTRLRARQNVLYELGYFAGKLGRG 246 + RT+IEK EA G+V FA+VL+TPDD GS + RARQNVL ELGYF G+LGR Sbjct: 267 NQGRTVIEKIEAH-GNVGFAVVLLTPDDVGSVK-DGTPEPRARQNVLLELGYFIGRLGRD 324 Query: 247 KVLVLRKGDIEIPSDLAGVLYTELDEHGGWKRKLLSELAYAGVPFDKDKALSA 299 +V L++G +EIPSD AGV++ +D GGWK+ L EL G D KA+ A Sbjct: 325 RVCALKRGQLEIPSDFAGVVWEAMDTAGGWKKSLCRELDAMGFAIDWKKAMQA 377 >UniRef50_B3QLE0 Nucleotide-binding protein containing TIR-like protein domain-like protein n=1 Tax=Chlorobaculum parvum NCIB 8327 RepID=B3QLE0_CHLP8 Length = 286 Score = 228 bits (580), Expect = 3e-58, Method: Composition-based stats. Identities = 106/289 (36%), Positives = 157/289 (54%), Gaps = 23/289 (7%) Query: 25 QQPLKQLARLLNSENLQSVNAHLTRNV----ELDTFLARSEDTESSMAGSAVLQWPDEPA 80 +QPL++ L +E ++ A L + + E+D +ED +S + G +L+ Sbjct: 4 EQPLQRKPANLKAEQMKRGIARLEQRIAEFEEIDVNTIENED-DSPLEGL-ILKANSTLQ 61 Query: 81 DILGLKLLLIEKMADDNNF-SFNFCHTF-FYDRNIIE-SIRKFTSSLVAPFVRDYQLYVE 137 DILG + + D F S + H D +I+ I+K +S V +L+ E Sbjct: 62 DILGYDSI---EYFDYKLFESISISHFIPSADITLIKSLIQKELTSAVRQLKTLKELFEE 118 Query: 138 NQHDPEPAVFRPVSR--------KIFIVHGHDNDALQSVARFISRIGLEEIILSERPDGS 189 D E P ++ K+FIVHGHD+ ++VARFI ++GLE IIL E+P+ Sbjct: 119 RIADAEALPENPTAQSLSPINTGKVFIVHGHDHGVKETVARFIEKLGLEPIILHEQPNEG 178 Query: 190 RTIIEKFEAESGDVSFAIVLMTPDDSGS-ALASESTRLRARQNVLYELGYFAGKLGRGKV 248 +T+IEK E + FA+VL TPDD+G + + + RARQNV+ ELGYF +LGR +V Sbjct: 179 KTVIEKIERHA-TADFAVVLFTPDDTGYPSKKPDDAKPRARQNVVLELGYFMARLGRNRV 237 Query: 249 LVLRKG-DIEIPSDLAGVLYTELDEHGGWKRKLLSELAYAGVPFDKDKA 296 +L+ G DIEIPSD +GVLY D GGWK +L SE+ G+ D + Sbjct: 238 ALLQVGDDIEIPSDFSGVLYLTFDNGGGWKYQLASEMKARGMAIDMNNV 286 >UniRef50_A4C149 Putative nucleotide-binding protein containing TIR-like domain n=1 Tax=Polaribacter irgensii 23-P RepID=A4C149_9FLAO Length = 255 Score = 218 bits (556), Expect = 1e-55, Method: Composition-based stats. Identities = 77/249 (30%), Positives = 112/249 (44%), Gaps = 28/249 (11%) Query: 50 NVELDTFLARSEDTESSMAGSAVLQWPDEPADILGLKLLLIEKMADDNNFSFNFCHTFFY 109 VE+ +++A ED S G W + N H + Sbjct: 34 GVEMQSWVAECEDFILSNYGKNSAPW---------------RIFERFDIRHLNDYHAHEF 78 Query: 110 DRNIIESIRKFTSSLVAPFVRDYQLYVENQHDPEPAVFRPVSRKIFIVHGHDNDALQSVA 169 + + + T+ L + + D K+FIVHGHD+ VA Sbjct: 79 ELEKTKLVSALTACLRITPKEKKKQIATQELDLT---------KVFIVHGHDDLLKNEVA 129 Query: 170 RFISRIGLEEIILSERPDGSRTIIEKFEAESGDVSFAIVLMTPDDSGSALASE-STRLRA 228 RFI ++GL+ IIL E+ TIIEK E S +V F IVL TP D G+ + + RA Sbjct: 130 RFIEKLGLKAIILHEQASSGNTIIEKIEENS-NVGFGIVLYTPCDIGTKKEENPNMQPRA 188 Query: 229 RQNVLYELGYFAGKLGRGKVLVLRKGDIEIPSDLAGVLYTELDEHGGWKRKLLSELAYAG 288 RQNV++E GY GK+GR V L KG++E P+D++GV+Y W+ L EL +G Sbjct: 189 RQNVVFEHGYLIGKIGRRNVCALVKGNVEKPNDISGVVYVS--TQEEWRLSLAKELRNSG 246 Query: 289 VPFDKDKAL 297 D + + Sbjct: 247 YDIDMNLVI 255 >UniRef50_D0LNL0 Nucleotide-binding protein, predicted, TIR-like protein n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LNL0_HALO1 Length = 596 Score = 197 bits (501), Expect = 4e-49, Method: Composition-based stats. Identities = 83/172 (48%), Positives = 109/172 (63%), Gaps = 1/172 (0%) Query: 126 APFVRDYQLYVENQHDPEPAVFRPVSRKIFIVHGHDNDALQSVARFISRIGLEEIILSER 185 Q + K+F+VHGHD +SVARF+ ++G + +IL+ER Sbjct: 426 GREAEMLQKKEMRDLQMNSSGNAATRNKVFVVHGHDKGVRESVARFLEKLGFDAVILNER 485 Query: 186 PDGSRTIIEKFEAESGDVSFAIVLMTPDDSGSALASESTRLRARQNVLYELGYFAGKLGR 245 PD TIIEKFE ES V FAIVL+TPDD G + ++LRARQNV++ELG+F GKLGR Sbjct: 486 PDQGATIIEKFERESKGVCFAIVLLTPDDVGGRIGD-DSQLRARQNVIFELGFFVGKLGR 544 Query: 246 GKVLVLRKGDIEIPSDLAGVLYTELDEHGGWKRKLLSELAYAGVPFDKDKAL 297 G+V +LRKGD+E+ SD GV+Y E D+H GWK L E+ AG+P D +K L Sbjct: 545 GRVALLRKGDVEMLSDYHGVVYREHDDHDGWKSWLAGEMKSAGLPIDLNKIL 596 >UniRef50_B1KWG1 YebB n=1 Tax=Clostridium botulinum A3 str. Loch Maree RepID=B1KWG1_CLOBM Length = 260 Score = 196 bits (497), Expect = 9e-49, Method: Composition-based stats. Identities = 80/221 (36%), Positives = 115/221 (52%), Gaps = 8/221 (3%) Query: 81 DILGLKLLLIEKMADDNNFSFNFCHTFFYDRNI-IESIRKFTSSL--VAPFVRDYQLYVE 137 D + L +++ +N + F YD+ I I+ R+ S L + F+ + ++ Sbjct: 44 DEIRYFLFKLKEWYRENQREIQ-SNDFVYDKEIHIKLEREIGSYLDEINRFIEENTSIIQ 102 Query: 138 NQHDPEPAVFRPVSRKIFIVHGHDNDALQSVARFISRIGLEEIILSERPDGSRTIIEKFE 197 + E KIFIVHGHD AL+ V FI I LE I+L + + TIIEK E Sbjct: 103 EKETNESVEINR--NKIFIVHGHDELALEQVINFIKDIRLEPIVLKNQANLGNTIIEKIE 160 Query: 198 AESGDVSFAIVLMTPDDSG-SALASESTRLRARQNVLYELGYFAGKLGRGKVLVLRKGDI 256 S V FAIVL TP D G S ++ RARQNV++E GY GKLGR V L KGD+ Sbjct: 161 EYSD-VGFAIVLYTPCDIGASTKDKDTVNKRARQNVVFEHGYLMGKLGRKNVCALVKGDV 219 Query: 257 EIPSDLAGVLYTELDEHGGWKRKLLSELAYAGVPFDKDKAL 297 E P+D++G++Y ELD W+ + ++ G D + + Sbjct: 220 EKPNDISGLVYVELDNQKAWRFNIARDMKKLGYDIDLNNLI 260 >UniRef50_B1ZZI8 Nucleotide-binding protein containing TIR-like protein domain-like protein n=1 Tax=Opitutus terrae PB90-1 RepID=B1ZZI8_OPITP Length = 268 Score = 191 bits (486), Expect = 2e-47, Method: Composition-based stats. Identities = 74/167 (44%), Positives = 103/167 (61%), Gaps = 2/167 (1%) Query: 134 LYVENQHDPEPAVFR-PVSRKIFIVHGHDNDALQSVARFISRIGLEEIILSERPDGSRTI 192 + + DP P + +F+VHGHD A +VARF+ ++G+ +IL E+ + T+ Sbjct: 102 AFNAKRFDPGAINTELPKANSVFLVHGHDEGAKHAVARFLEQLGITPVILQEQVNRGMTV 161 Query: 193 IEKFEAESGDVSFAIVLMTPDDSGSALASE-STRLRARQNVLYELGYFAGKLGRGKVLVL 251 IEKFE + FA+VLMTPDD G A E + R RQNV+ ELGYFA KLGR + LV+ Sbjct: 162 IEKFEEFASRAGFAVVLMTPDDIGYAANHEGDKKPRPRQNVILELGYFAAKLGRRRTLVI 221 Query: 252 RKGDIEIPSDLAGVLYTELDEHGGWKRKLLSELAYAGVPFDKDKALS 298 KG++E+PSD+ G+LY +D GWK L EL AG D ++AL+ Sbjct: 222 TKGELEMPSDVFGLLYEPMDSSHGWKMVLAQELKSAGFTIDLNRALN 268 >UniRef50_Q0HFN8 Nucleotide-binding protein containing TIR-like domain-like n=2 Tax=Gammaproteobacteria RepID=Q0HFN8_SHESM Length = 313 Score = 191 bits (485), Expect = 3e-47, Method: Composition-based stats. Identities = 74/152 (48%), Positives = 96/152 (63%) Query: 146 VFRPVSRKIFIVHGHDNDALQSVARFISRIGLEEIILSERPDGSRTIIEKFEAESGDVSF 205 P+ +K+FIVHGHD + VARFIS++GLE IIL E+ GS+TIIEK E + V F Sbjct: 162 STPPMKKKVFIVHGHDELTKEKVARFISQVGLEPIILHEQVSGSQTIIEKIERYADQVCF 221 Query: 206 AIVLMTPDDSGSALASESTRLRARQNVLYELGYFAGKLGRGKVLVLRKGDIEIPSDLAGV 265 AIVL TP D G+ + + RARQNV++E GYF KLGR KV + KG+IE+P+D +GV Sbjct: 222 AIVLYTPCDRGAKASERTPMFRARQNVVFEHGYFIAKLGRSKVTAIVKGNIELPNDFSGV 281 Query: 266 LYTELDEHGGWKRKLLSELAYAGVPFDKDKAL 297 +Y DE WK L E+ AG D + Sbjct: 282 VYVPFDESEAWKLSLAREMKGAGCEIDLAALV 313 >UniRef50_B1B7E7 Putative uncharacterized protein n=1 Tax=Clostridium botulinum C str. Eklund RepID=B1B7E7_CLOBO Length = 258 Score = 187 bits (475), Expect = 3e-46, Method: Composition-based stats. Identities = 75/221 (33%), Positives = 121/221 (54%), Gaps = 7/221 (3%) Query: 80 ADILGLKLLLIEKMADDNNFSFNFCH---TFFYDRNIIESIRKFTSSLVAPFVRDYQLYV 136 ++I G +++ ++ F ++R ++ + + +L+ F+ + L+ Sbjct: 40 SNIFGENSSQLKEFSNIKYNLVIFSAYTPEESFNRAYVKGL-EVAQALLGAFIEELNLFD 98 Query: 137 ENQHDPEPAVFRPVSRKIFIVHGHDNDALQSVARFISRIGLEEIILSERPDGSRTIIEKF 196 + + + ++ KIFIVHG DN A VARF+ ++ L I+L+E+ + TIIEK Sbjct: 99 TKEDQCVCDLDKTINNKIFIVHGRDNLAKTEVARFLEKLRLVPIVLNEQANEGTTIIEKL 158 Query: 197 EAESGDVSFAIVLMTPDDSGSALA-SESTRLRARQNVLYELGYFAGKLGRGKVLVLRKGD 255 E + DV FAIVL TP D G + + RARQNV++E GY GK+GR + L KGD Sbjct: 159 E-MNSDVGFAIVLYTPCDIGGLNDNTNNLMYRARQNVVFEHGYLIGKIGRKNISALVKGD 217 Query: 256 IEIPSDLAGVLYTELDEHGGWKRKLLSELAYAGVPFDKDKA 296 IE P+D++G++YT + E GWK +L +L AG D + Sbjct: 218 IETPNDISGIVYTSM-EGEGWKIQLAKDLKAAGYNIDFNLI 257 >UniRef50_Q21MV2 Nucleotide-binding protein containing TIR-like protein domain-like protein n=2 Tax=Bacteria RepID=Q21MV2_SACD2 Length = 287 Score = 184 bits (466), Expect = 4e-45, Method: Composition-based stats. Identities = 99/301 (32%), Positives = 138/301 (45%), Gaps = 44/301 (14%) Query: 25 QQPLKQLARLLNSENLQSVNAHLTRNVELDTFLARSEDTESSMAGSAVLQWPDEPADILG 84 +QP Q L L L D G A+ + + + L Sbjct: 3 EQPFSQKKPNL-----------LVPRDNAAKALQERIDK-----GRALQETNFQSIEQLS 46 Query: 85 LKLLLIEKMADDNNFSFNFC---------HTFFYDRNIIESIRKFTSSL------VAPFV 129 +K D N + C H+ + + + + Sbjct: 47 DVRAEQDKWNDYNIEYLSRCFDVPTISEEHSNVSGWAALVMNPSPLQRIKMFKDGIGKQI 106 Query: 130 RDYQLYVEN-QHDPEPAVFRPVSRK-----------IFIVHGHDNDALQSVARFISRIGL 177 + +E + PEP+ S+K +FIVHGHD+ A +VARF+ ++GL Sbjct: 107 TSLESILERLELIPEPSSTASFSQKATKTSSGDLSSVFIVHGHDDAAKVTVARFVEKLGL 166 Query: 178 EEIILSERPDGSRTIIEKFEAESGDVSFAIVLMTPDDSGSALAS-ESTRLRARQNVLYEL 236 + IIL E+PD +TIIEKFE+ + +V FAIVL+TPDD S+ A+ E T RARQNV+ EL Sbjct: 167 KAIILHEQPDKGQTIIEKFESNASNVGFAIVLLTPDDIASSKATPEDTMPRARQNVVLEL 226 Query: 237 GYFAGKLGRGKVLVLRKGDIEIPSDLAGVLYTELDEHGGWKRKLLSELAYAGVPFDKDKA 296 GYF G LGR KV VL K ++EIPSD GV+Y W KL E+ AG+ D + A Sbjct: 227 GYFCGSLGRDKVCVLYKDEVEIPSDYLGVIYMPFGSGDSWHFKLAREMKSAGLDIDLNSA 286 Query: 297 L 297 L Sbjct: 287 L 287 >UniRef50_A5EGX1 Putative uncharacterized protein n=1 Tax=Bradyrhizobium sp. BTAi1 RepID=A5EGX1_BRASB Length = 291 Score = 184 bits (466), Expect = 4e-45, Method: Composition-based stats. Identities = 67/170 (39%), Positives = 94/170 (55%), Gaps = 1/170 (0%) Query: 130 RDYQLYVENQHDPEPAVFRPVSRKIFIVHGHDNDALQSVARFISRIGLEEIILSERPDGS 189 +D + + P S KIF+VHG D A VA F+ +GL+ IIL RP+ Sbjct: 123 KDIESMIPEDAQPVTLEPAAASNKIFLVHGRDEAAKNEVALFLRNLGLDPIILHLRPNSG 182 Query: 190 RTIIEKFEAESGDVSFAIVLMTPDDSGSALASESTRLRARQNVLYELGYFAGKLGRGKVL 249 R ++ KF E+ +FA++LMTPDD G + RARQNV++ELG+F GKLG V Sbjct: 183 RHLLTKFREEADGANFAVILMTPDDVGGIAG-ADVQPRARQNVVFELGFFIGKLGPAHVA 241 Query: 250 VLRKGDIEIPSDLAGVLYTELDEHGGWKRKLLSELAYAGVPFDKDKALSA 299 L K ++E PSD G+ Y + WK +L E+ +A +PFD L+A Sbjct: 242 ALLKSNVEKPSDFDGIAYISYGQGTSWKTELAREMHHARIPFDASAVLTA 291 >UniRef50_C0PW38 Putative uncharacterized protein n=3 Tax=Salmonella enterica RepID=C0PW38_SALPC Length = 279 Score = 183 bits (463), Expect = 9e-45, Method: Composition-based stats. Identities = 69/158 (43%), Positives = 99/158 (62%), Gaps = 2/158 (1%) Query: 141 DPEPAVFRPVSRKIFIVHGHDNDALQSVARFISRIGLEEIILSERPDGSRTIIEKFEAES 200 P + S K+FIVHGHD+ A ARF+ ++ + IIL E+ RTIIEK E + Sbjct: 123 KPNKSTTNTKSDKVFIVHGHDDAAKIKTARFVEQLDYKAIILHEQASSGRTIIEKIEQFT 182 Query: 201 GDVSFAIVLMTPDDSGSALAS-ESTRLRARQNVLYELGYFAGKLGRGKVLVLRKGDIEIP 259 V FA+VL TPDD G+A + + +LRARQNV++E G+ GKLGR +V+ L G IE+P Sbjct: 183 D-VGFAVVLYTPDDIGNAKDNADDLQLRARQNVVFEHGFLIGKLGRDRVVALVDGAIELP 241 Query: 260 SDLAGVLYTELDEHGGWKRKLLSELAYAGVPFDKDKAL 297 +D++GV+Y ++DE W +L E+ AG D +K + Sbjct: 242 NDISGVVYIKMDEANAWHLQLAKEMKQAGFNIDMNKLV 279 >UniRef50_Q8EDI5 Putative uncharacterized protein n=1 Tax=Shewanella oneidensis RepID=Q8EDI5_SHEON Length = 271 Score = 182 bits (462), Expect = 1e-44, Method: Composition-based stats. Identities = 63/197 (31%), Positives = 89/197 (45%), Gaps = 7/197 (3%) Query: 104 CHTFFYDRNIIESIRKFTSSLVAPFVRDYQ-LYVENQHDPEPAVFRPVSRKIFIVHGHDN 162 H FF+ + S ++ DY + + + S+K+ IVHGHD Sbjct: 78 YHDFFWKTDGSAMNAYLESLILDIQNDDYDFTPINKEVQDVKTIPEAKSKKVLIVHGHDE 137 Query: 163 DALQSVARFISRIGLEEIILSERPDGSRTIIEKFEAESGDVSFAIVLMTPDDSGSAL--- 219 A F+ + G + IIL TII+K E + V + IVL TPDD G Sbjct: 138 AAKYRTEAFLRKHGFDPIILHLNASKGDTIIKKLERLAEGVGYGIVLYTPDDMGETKVKA 197 Query: 220 ASESTRLRARQNVLYELGYFAGKLGRGKVLVLRKGDIEIPSDLAGVLYTELDEHGGWKRK 279 + RARQNV++E GY G +GR V + +G +E PSD+ GV+Y W+ Sbjct: 198 VQHELQPRARQNVVFEHGYLMGLIGRPNVAAIVEGYVEKPSDIDGVVYIP---SSNWEID 254 Query: 280 LLSELAYAGVPFDKDKA 296 LL EL AG P + Sbjct: 255 LLRELHEAGYPINPANL 271 >UniRef50_UPI0001C33D0E hypothetical protein CATC2_14735 n=1 Tax=Citrobacter youngae ATCC 29220 RepID=UPI0001C33D0E Length = 270 Score = 182 bits (462), Expect = 1e-44, Method: Composition-based stats. Identities = 73/195 (37%), Positives = 106/195 (54%), Gaps = 7/195 (3%) Query: 106 TFFYDRNIIESIRKFTSSLVAPFVRDYQLYVENQHDPEPAVFRPVSRKIFIVHGHDNDAL 165 +F+ S L+ +Y L E + + + K+FI+HGHD +A Sbjct: 80 QYFWKNEGRRYEAYIDSLLIDLQNGEYSLPNETSDNQDKGNSLLANNKVFIIHGHDGEAK 139 Query: 166 QSVARFISRIGLEEIILSERPDGSRTIIEKFEAESGDVSFAIVLMTPDDSGSALASE--- 222 + ARFI ++GLE IILSE+ + +TIIEK E + V FAIVL T DD+G+ A Sbjct: 140 EKTARFIEKLGLEAIILSEQANQGKTIIEKLEHYTD-VGFAIVLYTGDDAGNTEAEAGIG 198 Query: 223 STRLRARQNVLYELGYFAGKLGRGKVLVLRKGDIEIPSDLAGVLYTELDEHGGWKRKLLS 282 + RARQNV++E G G+LGR KV+ L G +E+PSD+ GV+Y W+ ++ Sbjct: 199 NLNARARQNVVFEHGLLMGRLGRHKVIPLVSGTLELPSDIQGVVYI---NDRNWQLEVAR 255 Query: 283 ELAYAGVPFDKDKAL 297 E+ AG D +K L Sbjct: 256 EIKAAGYDIDMNKVL 270 >UniRef50_A1SX31 Putative nucleotide-binding protein containing TIR-like domain n=1 Tax=Psychromonas ingrahamii 37 RepID=A1SX31_PSYIN Length = 291 Score = 180 bits (456), Expect = 6e-44, Method: Composition-based stats. Identities = 78/217 (35%), Positives = 109/217 (50%), Gaps = 15/217 (6%) Query: 82 ILGLKLLLIEKMADDNNFSFNFCHTFFYDRNIIESIRKFTSSLVAPFVRDYQLYVENQHD 141 IL + L EK D + CH + P R+ Q+D Sbjct: 89 ILRGEKSLGEKRNDFTVKVEDKCH---------RLESIIERLELIPESRELISVNSIQND 139 Query: 142 PEPAVFRPVSRKIFIVHGHDNDALQSVARFISRIGLEEIILSERPDGSRTIIEKFEAESG 201 V +IFIVHGHD+ A VARFI ++G E II+ E+P+ S+TIIEK EA S Sbjct: 140 KSKNVNY---SQIFIVHGHDDSAKLEVARFIEKLGFEPIIIHEQPNASKTIIEKIEAFS- 195 Query: 202 DVSFAIVLMTPDDSGSALASE-STRLRARQNVLYELGYFAGKLGRGKVLVLRKGDIEIPS 260 +V F +V+ +P D G RARQNV++E G+ GKLGR KV L G++E P+ Sbjct: 196 NVGFGVVIYSPCDIGGKNKDNPELAGRARQNVVFEHGFLIGKLGRSKVCPLVTGNVETPN 255 Query: 261 DLAGVLYTELDEHGGWKRKLLSELAYAGVPFDKDKAL 297 D++G++YT +D W+ L EL A D + + Sbjct: 256 DISGIVYTSMD-TSNWQIALAKELRTADYAVDMNDVI 291 >UniRef50_Q6D353 Putative uncharacterized protein n=2 Tax=Gammaproteobacteria RepID=Q6D353_ERWCT Length = 270 Score = 178 bits (450), Expect = 3e-43, Method: Composition-based stats. Identities = 67/161 (41%), Positives = 90/161 (55%), Gaps = 1/161 (0%) Query: 133 QLYVENQHDPEPAVFRPVSRKIFIVHGHDNDALQSVARFISRIGLEEIILSERPDGSRTI 192 Q + + RK+FIVHG +N+ Q V+RFIS +GLE IIL E+ + TI Sbjct: 107 QRFNDRNPVLNSLPITRNKRKVFIVHGRNNEVKQEVSRFISDLGLEPIILHEQANVGMTI 166 Query: 193 IEKFEAESGDVSFAIVLMTPDDSGSALASEST-RLRARQNVLYELGYFAGKLGRGKVLVL 251 IEK E + D FA+VL T D G + + RARQNV++E GY KLGR V L Sbjct: 167 IEKIERYTNDADFALVLYTACDLGRGGDEPNPPKFRARQNVVFEHGYLMAKLGRENVCAL 226 Query: 252 RKGDIEIPSDLAGVLYTELDEHGGWKRKLLSELAYAGVPFD 292 K +IE P+D++GV+Y LD +G WK + EL G + Sbjct: 227 VKDNIETPNDISGVVYVPLDNYGAWKMSVSKELKTCGYSIN 267 >UniRef50_B0UTQ9 Putative nucleotide-binding protein containing TIR-like domain n=3 Tax=Bacteria RepID=B0UTQ9_HAES2 Length = 279 Score = 174 bits (440), Expect = 4e-42, Method: Composition-based stats. Identities = 68/145 (46%), Positives = 87/145 (60%), Gaps = 2/145 (1%) Query: 151 SRKIFIVHGHDNDALQSVARFISRIGLEEIILSERPDGSRTIIEKFEAESGDVSFAIVLM 210 K+FIVHG DN+ Q VARFI ++G E IIL E+ TIIEK E + +V F IVL Sbjct: 133 KNKVFIVHGRDNETKQEVARFIEKMGFEPIILHEQSSLGMTIIEKIEKYT-NVGFGIVLY 191 Query: 211 TPDDSGSALASEST-RLRARQNVLYELGYFAGKLGRGKVLVLRKGDIEIPSDLAGVLYTE 269 TP D G S + RARQNV++E G+ KLGR V L K DIE P+D++GV+Y Sbjct: 192 TPCDKGYEKDSPKEIKSRARQNVVFEHGFLISKLGRNNVCALVKDDIEKPNDISGVVYIT 251 Query: 270 LDEHGGWKRKLLSELAYAGVPFDKD 294 D +GGWK L E+ +G D + Sbjct: 252 FDSNGGWKIPLAKEMKSSGYEVDFN 276 >UniRef50_Q4C066 Similar to nucleotide-binding protein containing TIR-like domain n=1 Tax=Crocosphaera watsonii WH 8501 RepID=Q4C066_CROWT Length = 285 Score = 173 bits (437), Expect = 1e-41, Method: Composition-based stats. Identities = 73/157 (46%), Positives = 97/157 (61%), Gaps = 2/157 (1%) Query: 141 DPEPAVFRPVSRKIFIVHGHDNDALQSVARFISRIGLEEIILSERPDGSRTIIEKFEAES 200 + + IFIVHGHDN+A + V F+ ++ IIL E+ + +TIIEKFE S Sbjct: 129 NSNTTNKLQSGKDIFIVHGHDNEAKREVDVFLRKLDFNPIILHEQTNEGKTIIEKFENYS 188 Query: 201 GDVSFAIVLMTPDDSGSAL-ASESTRLRARQNVLYELGYFAGKLGRGKVLVLRKGDIEIP 259 VSFAI+L+TPDD G E + RARQNV+ ELGYF GKLGR KV L K +EIP Sbjct: 189 D-VSFAIILLTPDDEGRVRNKDEELKPRARQNVILELGYFMGKLGRDKVCALYKEKVEIP 247 Query: 260 SDLAGVLYTELDEHGGWKRKLLSELAYAGVPFDKDKA 296 SD +G+LYT++D GW K+ E+ +G+ D +K Sbjct: 248 SDYSGILYTKMDNDSGWHMKIAREIKKSGLDVDLNKL 284 >UniRef50_A3CWB8 Nucleotide-binding protein containing TIR-like domain-like n=1 Tax=Methanoculleus marisnigri JR1 RepID=A3CWB8_METMJ Length = 302 Score = 172 bits (435), Expect = 2e-41, Method: Composition-based stats. Identities = 71/292 (24%), Positives = 124/292 (42%), Gaps = 47/292 (16%) Query: 44 NAHLTRNVELDTFLARSEDTESSMAGSAVLQWPDEPADILG-----LKLLLIEKMADDNN 98 L+ N+ A + D+ G ++ + + ++ Sbjct: 12 LRALSENLREQRNTAEKLLKDRHGEDFNRPLAKQFVRDLFGGATCGIEDAEVREWYNETL 71 Query: 99 FSFN--FCHTFFYDRNIIESIRK-------FTSSLVAPFVRDYQLYVENQHDP------E 143 + F Y R I+ ++ F S ++D +E+ Sbjct: 72 ALVDHVFGTQNLYVRRFIKLQKEHDVDIFGFNSFSTGRLLKDSFNILEDCIKQLEMKINI 131 Query: 144 PAVFRPVSRKIFIVHGHDNDALQSVARFISRIGLEEIILSERPDGSRTIIEKFEAESGDV 203 + + R++FIVHGH+ V +F+++ LE IIL ++ + +TIIEK E S V Sbjct: 132 TSKPKKQDRRVFIVHGHNEQTKDEVEKFLTKYSLEPIILHKQANLGKTIIEKVEHYSNSV 191 Query: 204 SFAIVLMTPDDSGSALAS-------------------------ESTRLRARQNVLYELGY 238 FAI+L+T DD G+ + ++ + RARQNV++E GY Sbjct: 192 RFAIILLTGDDIGAKKNTPHNPPSFQTKKGTLIANDQWKNAILDNLKKRARQNVIFEFGY 251 Query: 239 FAGKLGRGKVLVLRKGDIEIPSDLAGVLYTELDEHGGWKRKLLSELAYAGVP 290 F G LGR V++L + +E+PSD G+LY L+ W+ +L++E+ G+ Sbjct: 252 FVGLLGRENVIILYEDGVELPSDTQGLLYISLN--SDWQNQLVNEIKAVGID 301 >UniRef50_A1ZY85 Putative uncharacterized protein n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZY85_9SPHI Length = 283 Score = 171 bits (433), Expect = 3e-41, Method: Composition-based stats. Identities = 78/224 (34%), Positives = 114/224 (50%), Gaps = 10/224 (4%) Query: 77 DEPADILGLKLLLIEKMADDNNFSFNF--CHTFFYDRNIIESIRKFTSSLVAPFVRDYQL 134 ++P + + + N N+ F D + I F+++ Sbjct: 67 EKPLEEYAKNINDRRSLQSTNILILNYTSSADIFEDETYTKVITDEVFEECEEFIKE--- 123 Query: 135 YVENQHDPEPAVFRPVSRKIFIVHGHDNDALQSVARFISRIGLEEIILSERPDGSRTIIE 194 + + K+FIVHGHD VARF+ ++ L IIL E+ DG +TIIE Sbjct: 124 --QTPAKASINKAKLDKTKVFIVHGHDQATKNEVARFLEKLDLTPIILHEQTDGGKTIIE 181 Query: 195 KFEAESGDVSFAIVLMTPDDSGSALAS-ESTRLRARQNVLYELGYFAGKLGRGKVLVLRK 253 K E S V ++IVL TP D G + + + RARQNV++E G+ GKLGR V L K Sbjct: 182 KIEKYSD-VGYSIVLYTPCDEGYKKGNPDDLKNRARQNVVFEHGFLIGKLGRKHVSTLIK 240 Query: 254 GDIEIPSDLAGVLYTELDEHGGWKRKLLSELAYAGVPFDKDKAL 297 GDIEIP+D++G++YT++D+ WK K+L EL AG D +K Sbjct: 241 GDIEIPNDISGLVYTKIDD-SSWKFKVLDELKNAGYDIDANKIF 283 >UniRef50_A4CFM1 Predicted nucleotide-binding protein n=2 Tax=Gammaproteobacteria RepID=A4CFM1_9GAMM Length = 305 Score = 170 bits (430), Expect = 5e-41, Method: Composition-based stats. Identities = 64/159 (40%), Positives = 92/159 (57%), Gaps = 1/159 (0%) Query: 133 QLYVENQHDPEPAVFRPVSRKIFIVHGHDNDALQSVARFISRIGLEEIILSERPDGSRTI 192 Q + ++FIVHGHD+ A ++ FIS +GL+ IIL ++ RTI Sbjct: 148 QQPTAEPPVIPTPPGVFNTSQVFIVHGHDDIAKLEMSSFISSLGLQPIILHQQASSGRTI 207 Query: 193 IEKFEAESGDVSFAIVLMTPDDSGSALASESTRLRARQNVLYELGYFAGKLGRGKVLVLR 252 IEK E S +V F +VL TP D GS + RARQNV++E G+ GKL R +V + Sbjct: 208 IEKIEHYS-NVGFGVVLYTPCDIGSKAGELTGNYRARQNVVFEHGFLIGKLSRSRVSAVV 266 Query: 253 KGDIEIPSDLAGVLYTELDEHGGWKRKLLSELAYAGVPF 291 KG++E P+D++GV+Y +D+ G WK++L EL AG Sbjct: 267 KGNVETPNDISGVVYVTMDQEGQWKQQLSVELRGAGYHV 305 >UniRef50_B8EAL8 Putative uncharacterized protein n=1 Tax=Shewanella baltica OS223 RepID=B8EAL8_SHEB2 Length = 268 Score = 169 bits (428), Expect = 9e-41, Method: Composition-based stats. Identities = 69/195 (35%), Positives = 97/195 (49%), Gaps = 8/195 (4%) Query: 107 FFYDRNIIESIRKFTSSLVAPFVRDYQL-YVENQHDPEPAVFRPVSRKIFIVHGHDNDAL 165 +F+ I S ++ Y L Y A + S+ +FIVHGH+N+ Sbjct: 78 YFWQNEGILLEGLIDSLILDVKDDVYDLEYKPTIVKTAKASPKEKSKNVFIVHGHNNEVK 137 Query: 166 QSVARFISRIGLEEIILSERPDGSRT-IIEKFEAESGDVSFAIVLMTPDDSGSALASES- 223 + ARFI ++G E IIL E+ G T IIEK + FAIVL T DD G +E Sbjct: 138 ERTARFIQKLGFEPIILHEQASGGSTTIIEKILEYAKTTDFAIVLYTADDVGGIKNTEPS 197 Query: 224 -TRLRARQNVLYELGYFAGKLGRGKVLVLRKGDIEIPSDLAGVLYTELDEHGGWKRKLLS 282 + RARQNV++E G G LGR V+ L +IEIP+D++GV+Y W+ + Sbjct: 198 VLKPRARQNVVFEHGLLIGLLGRENVVPLVADNIEIPNDISGVVYVR----NDWQTAIAK 253 Query: 283 ELAYAGVPFDKDKAL 297 E+ AG D +K Sbjct: 254 EMKKAGYEIDFNKLF 268 >UniRef50_D1VA94 Putative uncharacterized protein n=1 Tax=Frankia sp. EuI1c RepID=D1VA94_9ACTO Length = 167 Score = 168 bits (426), Expect = 2e-40, Method: Composition-based stats. Identities = 66/156 (42%), Positives = 92/156 (58%), Gaps = 1/156 (0%) Query: 143 EPAVFRPVSRKIFIVHGHDNDALQSVARFISR-IGLEEIILSERPDGSRTIIEKFEAESG 201 A V R IF+VHG DN A V R + + LE I+L+++P+ +TIIEK E Sbjct: 11 VSAPAAVVPRAIFLVHGRDNAARLQVQRVLEKATPLEVIVLADQPNSGQTIIEKLEGHFE 70 Query: 202 DVSFAIVLMTPDDSGSALASESTRLRARQNVLYELGYFAGKLGRGKVLVLRKGDIEIPSD 261 + +FA++LMT DD G S + RARQNV+ ELGY A KLGR V +L + +E+PSD Sbjct: 71 NSAFAVILMTADDEGRLKGSADLQSRARQNVILELGYAAAKLGRRNVAILFEDGVEMPSD 130 Query: 262 LAGVLYTELDEHGGWKRKLLSELAYAGVPFDKDKAL 297 GV T D GW ++L+E+ AG+ D +K + Sbjct: 131 FHGVGRTLFDSGNGWILEILAEMKVAGIEADLNKLM 166 >UniRef50_A6AKB0 YebB n=1 Tax=Vibrio harveyi HY01 RepID=A6AKB0_VIBHA Length = 269 Score = 168 bits (425), Expect = 2e-40, Method: Composition-based stats. Identities = 77/255 (30%), Positives = 124/255 (48%), Gaps = 26/255 (10%) Query: 53 LDTFLARSEDTESSMAGSAVLQWPDEPADIL--------GLKLLLIEKMADDNNFSFNFC 104 +D + ++ S++ + +L + GL + + +D+N Sbjct: 32 VDKMYSELQNKSGSISAARLLMLASKIEKFFSEYRSDGDGLYIPPTQAWQNDDN-----V 86 Query: 105 HTFFYDRNIIESIRKFTSSLVAPFVRDYQLYVENQHDPEPAVFRPVSRKIFIVHGHDNDA 164 F N I + + + P + + ++K+FIVHG +N+ Sbjct: 87 KAIFKLANEISQLDDDSFKKLLPQPEVKT--------VTSSKAKFDNQKVFIVHGRENET 138 Query: 165 LQSVARFISRIGLEEIILSERPDGSRTIIEKFEAESGDVSFAIVLMTPDDSG-SALASES 223 VARFI ++G E I+L E+ G +TIIEK E+ + V FA+VL TPDD G A + Sbjct: 139 KIEVARFIEKLGFEAIVLHEQASGGKTIIEKIESYTD-VGFAVVLYTPDDVGALAAEQQD 197 Query: 224 TRLRARQNVLYELGYFAGKLGRGKVLVLRKGDIEIPSDLAGVLYTELDEHGGWKRKLLSE 283 + RARQNV++E GY K+GR +V L KG+IE+P+D++GV+Y + W+ L E Sbjct: 198 LKNRARQNVVFEHGYLMAKIGRDRVAPLVKGNIELPNDISGVVYVS---NENWQVDLAKE 254 Query: 284 LAYAGVPFDKDKALS 298 L+ AG D +K Sbjct: 255 LSSAGYNVDFNKLFK 269 >UniRef50_C1DBI6 Putative uncharacterized protein n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1DBI6_LARHH Length = 252 Score = 168 bits (424), Expect = 3e-40, Method: Composition-based stats. Identities = 59/163 (36%), Positives = 86/163 (52%), Gaps = 6/163 (3%) Query: 143 EPAVFRPVSRKIFIVHGHDNDALQSVARFISRIGLEEIILSERPDGSRTIIEKFEAESGD 202 A + +++FIVHGHD+ A + + + ++GL+ +L+ TIIE EA+ G Sbjct: 88 NAATAAVIPKQVFIVHGHDDTAREQLELVLHKLGLDPYVLANTGGHGLTIIEALEAKIGK 147 Query: 203 ---VSFAIVLMTPDDSGSA--LASESTRLRARQNVLYELGYFAGKLGRGKVLVLRKGDIE 257 SF IVLMTPDD G A +S + RARQNV+ E+G +GR + +L KG +E Sbjct: 148 NAASSFGIVLMTPDDMGYALSKGQDSAQPRARQNVVLEMGMLISSIGRRNIAILVKGHLE 207 Query: 258 IPSDLAGVLYTELDEH-GGWKRKLLSELAYAGVPFDKDKALSA 299 PSD G+LY + H +L + L +G DK A Sbjct: 208 KPSDADGILYIPFNNHVKETVPRLANRLKESGFILSPDKITHA 250 >UniRef50_A1ZY86 Putative uncharacterized protein n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZY86_9SPHI Length = 283 Score = 168 bits (424), Expect = 3e-40, Method: Composition-based stats. Identities = 69/184 (37%), Positives = 103/184 (55%), Gaps = 5/184 (2%) Query: 117 IRKFTSSLVAPFVRDYQLYVENQHDPEPAVFRPVSRKIFIVHGHDNDALQSVARFISRIG 176 ++ TS ++ + D P + ++FIVHGHD+ VARFI + Sbjct: 103 VQDITSQVIKECKSEISQ-ETQPPDKTPQRNGFDNTEVFIVHGHDDSKTDKVARFIQTLS 161 Query: 177 LEEIILSERPDGSRTIIEKFEAESGDVSFAIVLMTPDDSGSALASE-STRLRARQNVLYE 235 L IILSE+ G +TII+K ++ S +V + IVL TP D GS + E + RARQNV++E Sbjct: 162 LVPIILSEQASGGQTIIDKLDSNS-NVGYGIVLYTPCDQGSKIGDEKDAKKRARQNVVFE 220 Query: 236 LGYFAGKLGRGKVLVLR-KGDIEIPSDLAGVLYTELDEHGGWKRKLLSELAYAGVPFDKD 294 G+ GKLGR +V VL +IE P+D++GVLY ++ + GW+ + EL AG D + Sbjct: 221 HGFLIGKLGRSRVCVLITDEEIEKPNDISGVLYIKMHD-SGWQLSVAKELNKAGYDVDAN 279 Query: 295 KALS 298 + Sbjct: 280 SLIK 283 >UniRef50_Q0YR18 Nucleotide-binding protein containing TIR-like domain-like n=1 Tax=Chlorobium ferrooxidans DSM 13031 RepID=Q0YR18_9CHLB Length = 261 Score = 165 bits (418), Expect = 1e-39, Method: Composition-based stats. Identities = 60/172 (34%), Positives = 93/172 (54%), Gaps = 1/172 (0%) Query: 125 VAPFVRDYQLYVENQHDPEPAVFRPVSRKIFIVHGHDNDALQSVARFISRIGLEEIILSE 184 + ++ D+ + + +F+VHG ++ A V+ ++ ++GL+ IIL E Sbjct: 91 LKNYLADFSEESLTVNIVSGQAVDSDTPDVFVVHGRNDGAKAQVSSYLLKLGLKPIILHE 150 Query: 185 RPDGSRTIIEKFEAESGDVSFAIVLMTPDDSGSALASESTRLRARQNVLYELGYFAGKLG 244 + + +TIIEKFE + +V AIVL T DD G E +RARQNV++E GYF GK+G Sbjct: 151 QLNQGQTIIEKFEKHA-NVKAAIVLFTDDDLGKYRDDEVLEVRARQNVVFEAGYFIGKIG 209 Query: 245 RGKVLVLRKGDIEIPSDLAGVLYTELDEHGGWKRKLLSELAYAGVPFDKDKA 296 R ++L ++IPSDL G + ELD+ W + EL G D +K Sbjct: 210 RQNTIILLSSGLKIPSDLQGYVNFELDDRQRWHIDVAKELKGIGFNIDMNKL 261 >UniRef50_Q8D9V5 Predicted nucleotide-binding protein n=1 Tax=Vibrio vulnificus RepID=Q8D9V5_VIBVU Length = 299 Score = 164 bits (415), Expect = 3e-39, Method: Composition-based stats. Identities = 65/155 (41%), Positives = 88/155 (56%), Gaps = 1/155 (0%) Query: 137 ENQHDPEPAVFRPVSRKIFIVHGHDNDALQSVARFISRIGLEEIILSERPDGSRTIIEKF 196 E ++ P ++FIVHGHD A V ++ GLE IIL + G RTIIEK Sbjct: 143 EAENLPPEDGSSFNKNQVFIVHGHDEHAKNDVKAYVESKGLEPIILHLQASGGRTIIEKI 202 Query: 197 EAESGDVSFAIVLMTPDDSGSALASESTRLRARQNVLYELGYFAGKLGRGKVLVLRKGDI 256 + S +V F IVL T D G+ + S + RARQNV++E GY KL R +V L KG + Sbjct: 203 DHYS-NVGFGIVLYTECDLGAKRDTLSFKWRARQNVVFEHGYLIAKLSRERVAALVKGSV 261 Query: 257 EIPSDLAGVLYTELDEHGGWKRKLLSELAYAGVPF 291 E P+D++GV+Y +D G WK +L +EL AG Sbjct: 262 ETPNDISGVVYVSMDAAGTWKDELDAELRNAGYEI 296 >UniRef50_C8PV46 Putative uncharacterized protein n=1 Tax=Enhydrobacter aerosaccus SK60 RepID=C8PV46_9GAMM Length = 287 Score = 161 bits (408), Expect = 2e-38, Method: Composition-based stats. Identities = 65/204 (31%), Positives = 97/204 (47%), Gaps = 11/204 (5%) Query: 97 NNFSFNFCHTFFYDRNIIESIRKFTSSLVAPFVRDYQLYVENQHDPEPAVFRPVSRKIFI 156 + + F H D K + + + + ++ E + P K+FI Sbjct: 90 SIVAIGFYHN---DLETAILKEKEITDELITYPKGKKIKQETDLNK---SIAPKPSKVFI 143 Query: 157 VHGHDNDALQSVARFISRIGLEEIILSERPDGSRTIIEKFEAESGD--VSFAIVLMTPDD 214 VHGHD+ + V F+ +E I+L E+ D S TIIEK E + D + F IVL TPDD Sbjct: 144 VHGHDDPLINEVKAFLLSQSIEPIVLREQHDASLTIIEKLEQYTSDPAIGFGIVLYTPDD 203 Query: 215 SGSALASESTRLRARQNVLYELGYFAGKLGRGKVLVLRKGD--IEIPSDLAGVLYTELDE 272 G + RLRARQNV++E G G R +V L K + +E+P D+ GV+YT+ Sbjct: 204 EGKGIKEPEYRLRARQNVVFEHGLLIGLYTRSRVTCLVKKEGFLEMPGDVNGVVYTD-HA 262 Query: 273 HGGWKRKLLSELAYAGVPFDKDKA 296 + W+ + L +G D K Sbjct: 263 YNDWRLSVAHMLNKSGYDIDYSKI 286 >UniRef50_C7H3F1 Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H3F1_9FIRM Length = 226 Score = 161 bits (406), Expect = 3e-38, Method: Composition-based stats. Identities = 57/157 (36%), Positives = 82/157 (52%), Gaps = 4/157 (2%) Query: 144 PAVFRPVSRKIFIVHGHDNDALQSVARFISRIGLEEIILSERPDGSRTIIEKFEAESGDV 203 +++K+F+V+GHDN+A + + R LE +I+ + +TIIEK E +G Sbjct: 70 KIATPTLNKKVFVVYGHDNNARTQLEAMLRRWDLEPLIIDQLASKGQTIIEKLEEYTGQA 129 Query: 204 SFAIVLMTPDDSGSALASE-STRLRARQNVLYELGYFAGKLGRGKVLVLRKG--DIEIPS 260 +F IVL TPDD G A E + RARQNV+ ELG K+GR KV +L +E PS Sbjct: 130 NFGIVLATPDDVGYAKDHEDDKKFRARQNVVLELGMLLAKIGRSKVAILLSQADKMERPS 189 Query: 261 DLAGVLYTELDEH-GGWKRKLLSELAYAGVPFDKDKA 296 D+ G++Y + K L EL G D + Sbjct: 190 DIDGLIYIPFSNNVEEGKVSLAKELKRNGYTIDIENL 226 >UniRef50_Q3R8P5 Putative uncharacterized protein n=1 Tax=Xylella fastidiosa subsp. sandyi Ann-1 RepID=Q3R8P5_XYLFA Length = 164 Score = 159 bits (403), Expect = 7e-38, Method: Composition-based stats. Identities = 56/150 (37%), Positives = 78/150 (52%), Gaps = 5/150 (3%) Query: 152 RKIFIVHGHDNDALQSVARFISRIGLEEIILSERPDGSRTIIEKFEAESGDVSFAIVLMT 211 K+F+V+GHD A + + R LE +IL + P +TIIEK E + +V FA+VL T Sbjct: 15 SKVFVVYGHDPVARTELEAMLRRWRLEPLILEQLPSEGQTIIEKLEKYTAEVKFAVVLAT 74 Query: 212 PDDSGSALASESTR-LRARQNVLYELGYFAGKLGRGKVLVLRKG--DIEIPSDLAGVLYT 268 PDD G E+ + RARQNV+ ELG LGR V +L K ++E PSD+ G+LY Sbjct: 75 PDDEGFCACHENEKIFRARQNVVLELGMMLTLLGRKNVAILMKQQDNMERPSDIQGLLYI 134 Query: 269 ELDEH--GGWKRKLLSELAYAGVPFDKDKA 296 ++ L E+A G Sbjct: 135 PFKDNLQKDAGTILAKEMAAQGYQISVANL 164 >UniRef50_B4S624 Nucleotide-binding protein containing TIR-like protein domain-like protein n=1 Tax=Prosthecochloris aestuarii DSM 271 RepID=B4S624_PROA2 Length = 507 Score = 158 bits (400), Expect = 2e-37, Method: Composition-based stats. Identities = 64/147 (43%), Positives = 104/147 (70%), Gaps = 2/147 (1%) Query: 151 SRKIFIVHGHDNDALQSVARFISRIGLEEIILSERPDGSRTIIEKFEAESGDVSFAIVLM 210 ++K+F+VHGH+ DA ++ +++ + LE I ++++P +TII+KF + + V+FAIVL+ Sbjct: 360 TKKVFVVHGHNVDARDAIEKYLEDLDLEPITIAKQPHEGQTIIDKFTSNAD-VAFAIVLL 418 Query: 211 TPDDSGSALASES-TRLRARQNVLYELGYFAGKLGRGKVLVLRKGDIEIPSDLAGVLYTE 269 T DD+ + + S RLRARQNV++ELG+F G+L + V +L KGDIE PSD+ G+ +T Sbjct: 419 TSDDNCTENHNGSSPRLRARQNVIFELGFFLGRLDKKNVAMLIKGDIEKPSDIEGIGFTV 478 Query: 270 LDEHGGWKRKLLSELAYAGVPFDKDKA 296 ++++G WK KL E+ AG+ DK+K Sbjct: 479 MEDNGAWKSKLADEMKAAGLNIDKNKI 505 >UniRef50_Q1NBU8 Putative uncharacterized protein n=1 Tax=Sphingomonas sp. SKA58 RepID=Q1NBU8_9SPHN Length = 315 Score = 158 bits (398), Expect = 3e-37, Method: Composition-based stats. Identities = 65/153 (42%), Positives = 93/153 (60%), Gaps = 9/153 (5%) Query: 150 VSRKIFIVHGHDNDALQSVARFIS-RIGLEEIILSERPDGSRTIIEKFEAESGDVSFAIV 208 V K+F+VHG D A +VARF+ R+GL IILSERP+ R+I+ KF+ E+ ++A++ Sbjct: 157 VPAKVFLVHGRDEAAKHAVARFLETRVGLGVIILSERPNQGRSILTKFQEEADGAAYAVI 216 Query: 209 LMTPDDSGSALA--------SESTRLRARQNVLYELGYFAGKLGRGKVLVLRKGDIEIPS 260 LMTPDD G R RQNV++E+G+F G+LG +V L ++E PS Sbjct: 217 LMTPDDLGQLRPGLLPAGVAPADPAPRPRQNVIFEMGFFIGQLGADRVCALVPPNVERPS 276 Query: 261 DLAGVLYTELDEHGGWKRKLLSELAYAGVPFDK 293 D G++Y D+ GW+RKL++EL A VP Sbjct: 277 DYDGIVYVPFDDQEGWQRKLVTELHAANVPVSP 309 >UniRef50_C6M8A7 Putative uncharacterized protein n=1 Tax=Neisseria sicca ATCC 29256 RepID=C6M8A7_NEISI Length = 259 Score = 156 bits (395), Expect = 7e-37, Method: Composition-based stats. Identities = 62/198 (31%), Positives = 95/198 (47%), Gaps = 8/198 (4%) Query: 110 DRNIIESIRKFTSSLVAPFVRDYQLYVENQHDPEPAVFRPV--SRKIFIVHGHDNDALQS 167 + + + I + S + Q E V V K+F+VHGHD A + Sbjct: 60 NEALSKMINELCDSNTSSISSISQAKTHQLQTIEKIVPATVETKGKVFVVHGHDEMAREQ 119 Query: 168 VARFISRIGLEEIILSERPDGSRTIIEKFEAESG----DVSFAIVLMTPDDSGSA-LASE 222 + + ++G+E +L TIIE E + G +V F IVL+TPDD G A + + Sbjct: 120 LELVLHKLGIEHFVLQNTGGNGLTIIEALEQQIGTAPTEVKFGIVLLTPDDMGYAIKSPD 179 Query: 223 STRLRARQNVLYELGYFAGKLGRGKVLVLRKGDIEIPSDLAGVLYTELDEH-GGWKRKLL 281 + RARQNV+ E+G +GR V +L+KGD+E+PSD G+LY D H +L Sbjct: 180 KVQPRARQNVVLEMGMLLSSIGRKHVAILKKGDLEVPSDANGILYIGFDNHVRETVSRLA 239 Query: 282 SELAYAGVPFDKDKALSA 299 L +G + + + A Sbjct: 240 ERLTESGFKINPENIIKA 257 >UniRef50_Q120Z2 Putative uncharacterized protein n=1 Tax=Polaromonas sp. JS666 RepID=Q120Z2_POLSJ Length = 256 Score = 153 bits (387), Expect = 5e-36, Method: Composition-based stats. Identities = 35/155 (22%), Positives = 69/155 (44%), Gaps = 10/155 (6%) Query: 6 FQSLKNCVFDLQRADVQNYQQPLKQLARLLNSENLQSVNAHLTRNVELDTFLARSEDTES 65 + L V D + Q+ + L++ L+ E L + + D +LA++++T Sbjct: 15 LRDLDETVSDFRDTSFQSSESVLQRFVHHLDEEPLAGFLKAVLPVPDFDGWLAKAQNTIG 74 Query: 66 SMAGSAVLQWPDEPADILGLKLLLIEKMADDNNFSFNFCHTFFYD-RNIIESIRKFTSSL 124 SM GS L+WP ++ + +++ L + + +F H F Y R++ + F + L Sbjct: 75 SMVGSGTLEWPPSRSERVAMQVALCRAILNKTVRFLDFVHNFMYTGRDVARHVDDFATKL 134 Query: 125 VAPFVRDYQLYVENQHDPEPAVFRPVSRKIFIVHG 159 + P +RD E++ P+S +F G Sbjct: 135 LNPLMRDIARLTESR---------PLSPVLFEAMG 160 >UniRef50_B7M8G7 Putative uncharacterized protein n=2 Tax=Escherichia coli RepID=B7M8G7_ECO8A Length = 253 Score = 153 bits (385), Expect = 1e-35, Method: Composition-based stats. Identities = 57/162 (35%), Positives = 84/162 (51%), Gaps = 8/162 (4%) Query: 146 VFRPVSRKIFIVHGHDNDALQSVARFISRIGL-EEIILSERPDGSRTIIEKFEAESGD-- 202 + +KIFIVHGHD+ A + + + ++GL + IL TIIE+ E E G Sbjct: 90 QPSELPKKIFIVHGHDHTAKEQLELILHKLGLPDHFILQNTGGTGLTIIEELEREIGQGQ 149 Query: 203 --VSFAIVLMTPDDSGSAL--ASESTRLRARQNVLYELGYFAGKLGRGKVLVLRKGDIEI 258 F IVL+TPDD G + + RARQNV+ E+G LGR V +L+K +E Sbjct: 150 TATRFGIVLLTPDDMGYSKRAGEAEIQPRARQNVVLEMGMLLSSLGRSNVAILQKQHLEQ 209 Query: 259 PSDLAGVLYTELDEH-GGWKRKLLSELAYAGVPFDKDKALSA 299 PSD G+LY ++H +L+ L +G F + + +A Sbjct: 210 PSDANGILYLNFNDHVRETVPRLVQRLQNSGFEFTQAQIANA 251 >UniRef50_B2I7C5 Putative uncharacterized protein n=8 Tax=Proteobacteria RepID=B2I7C5_XYLF2 Length = 234 Score = 147 bits (371), Expect = 4e-34, Method: Composition-based stats. Identities = 59/196 (30%), Positives = 87/196 (44%), Gaps = 12/196 (6%) Query: 80 ADILGLKLLLIEKMADDNNFSFNFCHTFFYDRNIIES--IRKFTSSLVAPFVRDYQLYVE 137 A+ + L ++ N N H N I + + Sbjct: 20 ANEVALSNGKGTQLRLQNEAIVNSYH----TGNFIVQGKNQDAVKKCLGVQPTHVAA--- 72 Query: 138 NQHDPEPAVFRPVSRKIFIVHGHDNDALQSVARFISRIGLEEIILSERPDGSRTIIEKFE 197 A +P+ K+F+V+GHD A + + R LE +IL + P +TIIEK E Sbjct: 73 APTPQNGAATKPMLSKVFVVYGHDAAARTELEAMLRRWKLEPLILDQLPSQGQTIIEKLE 132 Query: 198 AESGDVSFAIVLMTPDDSGSALASEST-RLRARQNVLYELGYFAGKLGRGKVLVLRKG-- 254 + +V FA+VL TPDD G E+ + RARQNV+ EL LGR V +L K Sbjct: 133 KYTAEVKFAVVLATPDDEGFPACQENEKKFRARQNVVLELDMMLTLLGRKNVAILMKQQD 192 Query: 255 DIEIPSDLAGVLYTEL 270 ++E PSD+ G+L + Sbjct: 193 NMERPSDIQGLLVHPV 208 >UniRef50_C3L6B4 Conserved domain protein n=10 Tax=Bacillus anthracis RepID=C3L6B4_BACAC Length = 273 Score = 145 bits (366), Expect = 2e-33, Method: Composition-based stats. Identities = 59/159 (37%), Positives = 95/159 (59%), Gaps = 7/159 (4%) Query: 139 QHDPEPAVFRPVSRKIFIVHGHDNDALQSVARFISRIGLEEIILSERPDGSRTIIEKFEA 198 + A + K+FIVHGHD++ Q + F++ IG++ ++L + T++EKFE Sbjct: 114 KEAEVAASVEVDNTKVFIVHGHDDNLKQQLEIFLNSIGIKPVVLHREANEGLTVLEKFEK 173 Query: 199 ESGDVSFAIVLMTPDDSG-----SALASESTRLRARQNVLYELGYFAGKLGRGKVLVLRK 253 S V +A VL+TPDD G A + E RARQNV++ELG+F GKLGR KV L K Sbjct: 174 HSD-VQYAFVLLTPDDIGCSVKERAKSVEEYSFRARQNVIFELGFFIGKLGRAKVCTLYK 232 Query: 254 GDIEIPSDLAGVLYTELDEH-GGWKRKLLSELAYAGVPF 291 +E+P+D++G++Y +++++ ++ EL AG+ Sbjct: 233 DGVELPNDISGLVYQKVNDNIEDVGYHIMKELRAAGLKV 271 >UniRef50_Q3SKL0 Putative uncharacterized protein n=2 Tax=Betaproteobacteria RepID=Q3SKL0_THIDA Length = 261 Score = 141 bits (356), Expect = 2e-32, Method: Composition-based stats. Identities = 52/173 (30%), Positives = 86/173 (49%), Gaps = 10/173 (5%) Query: 119 KFTSSLVAPFVRDYQLYVENQHDPE---PAVFRPVSRKIFIVHGHDNDALQSVARFISRI 175 ++ S + RD E + + E P + +R++FI HG D + A I Sbjct: 92 RYARSQLEVLARDIDQIFELRANSELAPPLIAAATTRRVFISHGRAPDWREVQAYVEKDI 151 Query: 176 GLEEIILSERPDGSRTIIEKFEAESGDVSFAIVLMTPDDSGSALASESTRLRARQNVLYE 235 GL + L++ P+ RTI+ K SG A+++MT DD + + RAR+NV++E Sbjct: 152 GLPTLELAQEPNQGRTILAKLMEASGQCDSAVIVMTGDDL-----DAAGQARARENVIHE 206 Query: 236 LGYFAGKLGRGKVLVLRKGDIEIPSDLAGVLYTELDEH--GGWKRKLLSELAY 286 +G+F GK G G+V +L + + IPS++ G++YT + L EL Sbjct: 207 IGFFQGKYGLGRVCLLHEEGVSIPSNIHGLVYTPFPKGMVSACFGVLTRELKA 259 >UniRef50_B2IV30 Putative uncharacterized protein n=2 Tax=Bacteria RepID=B2IV30_NOSP7 Length = 372 Score = 138 bits (347), Expect = 2e-31, Method: Composition-based stats. Identities = 50/279 (17%), Positives = 90/279 (32%), Gaps = 20/279 (7%) Query: 10 KNCVFDLQRADVQNYQQPLKQLARLLNSENL-QSVNAHLTRNVELD--------TFLARS 60 D D + LK A + E L + N +L + LA Sbjct: 82 NETRGDWCEYDFDSIYNILKSKAINFSLEQLNELANYANEEIPDLREELISIIFSCLASG 141 Query: 61 EDTESS-MAGSAVLQWPDEPADILGLKLLLIEKMADDNNFSFNFC----HTFFYDRNIIE 115 EDT + A L + + + + D + H + + + Sbjct: 142 EDTYLDRLKQEAELCKTSSVGEFVDYLRGGGQFFSRDRVAVLSGSQTPPHIYLQAQLLAV 201 Query: 116 SIRKFTSSLVAPFVRDYQLYVENQHDPEPAVFRPVSRKIFIVHGHDNDALQSVARFISRI 175 + + L++ N+ +P + +FI HGH R+ Sbjct: 202 QSPSTVAKSLKKIANRLALHLTNKSRTYMYSSQPGTH-VFIGHGHSPLWRDLKDFISERL 260 Query: 176 GLEEIILSERPDGSRTIIEKFEAESGDVSFAIVLMTPDDSGSALASESTRLRARQNVLYE 235 L + P + + A ++MT +D +LRAR NV++E Sbjct: 261 KLPWDEFNRLPIAGINNTVRLSQMLDSAAIAFLIMTGEDE-----QSDLKLRARMNVIHE 315 Query: 236 LGYFAGKLGRGKVLVLRKGDIEIPSDLAGVLYTELDEHG 274 G F G+LG + ++L + E S++ G+ Y Sbjct: 316 AGLFQGRLGFRRAILLLEEGCENFSNVDGIGYINFPRGN 354 >UniRef50_Q54F65 Protein tirC n=1 Tax=Dictyostelium discoideum RepID=TIRC_DICDI Length = 201 Score = 130 bits (327), Expect = 5e-29, Method: Composition-based stats. Identities = 49/148 (33%), Positives = 80/148 (54%), Gaps = 13/148 (8%) Query: 153 KIFIVHGHDNDALQSVARFISRIGLEEIILSERPDGSRTIIEKFEAESGDVSFAIVLMTP 212 K+FIVHGH+N + V++F+ +G E I+L E+P+ +TIIEK E E + F IV+M+P Sbjct: 55 KVFIVHGHNNIVREKVSKFLFEMGFEPILLFEKPNNGQTIIEKLEKEISNCKFGIVIMSP 114 Query: 213 DDSGSALASESTRL----RARQNVLYELGYFAGKLGRGKVLVL------RKGDIEIPSDL 262 D+ ++ R NV++E GY GK GR V+ L + + ++PSDL Sbjct: 115 DNKAFTKKDSNSDYVEIAYPRLNVVFEFGYLIGKFGRSNVIYLSVPYNGKSQNYDLPSDL 174 Query: 263 AGVLYTELDEHGGWKRKLLSELAYAGVP 290 G ++ E ++L +E+ + Sbjct: 175 LGYVWINYTE---DLKELENEINFGNYK 199 >UniRef50_UPI0001BC92F3 hypothetical protein PsyrptA_06199 n=1 Tax=Pseudomonas syringae pv. tabaci ATCC 11528 RepID=UPI0001BC92F3 Length = 372 Score = 128 bits (322), Expect = 2e-28, Method: Composition-based stats. Identities = 31/160 (19%), Positives = 58/160 (36%), Gaps = 7/160 (4%) Query: 115 ESIRKFTSSLVAPFVRDYQLYVENQHDPEPAVFRPVSRKIFIVHGHDNDALQSVARFISR 174 + L+ + Y + ++ V +FI HG + R Sbjct: 200 RLPHEAIGRLLPVLKKAYSYILRSRKKMVKDSL--VGTNVFIGHGRSHVWRDLKDFVTER 257 Query: 175 IGLEEIILSERPDGSRTIIEKFEAESGDVSFAIVLMTPDDSGSALASESTRLRARQNVLY 234 + L + P T I + A ++MT +D ++ AR NV++ Sbjct: 258 LKLPFDEFNRVPVAGITNIARLSEMLDSAVVAFIVMTAEDE-----QADGKMEARTNVIH 312 Query: 235 ELGYFAGKLGRGKVLVLRKGDIEIPSDLAGVLYTELDEHG 274 E+G F G+LG + +VL + E S++ G+ + Sbjct: 313 EVGLFQGRLGFTRAIVLLEEGCEEFSNIQGLGQIRFPKGD 352 >UniRef50_A4EPJ5 Putative uncharacterized protein n=1 Tax=Roseobacter sp. SK209-2-6 RepID=A4EPJ5_9RHOB Length = 366 Score = 127 bits (320), Expect = 3e-28, Method: Composition-based stats. Identities = 32/170 (18%), Positives = 62/170 (36%), Gaps = 6/170 (3%) Query: 105 HTFFYDRNIIESIRKFTSSLVAPFVRDYQLYVENQHDPEPAVFRPVSRKIFIVHGHDNDA 164 H + + +A R ++ + E R + +FI HG + Sbjct: 185 HQEVIAKAASLQCPADAAKSLAAIARKAGSHMSRKEKQERRSERVGTN-VFIGHGRSSLW 243 Query: 165 LQSVARFISRIGLEEIILSERPDGSRTIIEKFEAESGDVSFAIVLMTPDDSGSALASEST 224 + + R+ L + P T I + A +++T +D Sbjct: 244 RELKDFVVGRLNLPYEEFNRVPVAGVTNISRLSEMLDGAGCAFIVLTSEDE-----QADG 298 Query: 225 RLRARQNVLYELGYFAGKLGRGKVLVLRKGDIEIPSDLAGVLYTELDEHG 274 + AR NV++E+G F G+LG K +V+ + E S++ G+ + Sbjct: 299 SMHARMNVIHEVGLFQGRLGFTKAIVVLEEGCEEFSNIQGLGQIRFPKGN 348 >UniRef50_C1BE84 Putative uncharacterized protein n=1 Tax=Rhodococcus opacus B4 RepID=C1BE84_RHOOB Length = 671 Score = 127 bits (319), Expect = 5e-28, Method: Composition-based stats. Identities = 45/179 (25%), Positives = 72/179 (40%), Gaps = 15/179 (8%) Query: 131 DYQLYVENQHDPEPAVFRPVSRKIFIVHGHDNDALQSVARFISRIGLEEIILSERPD--- 187 D + +P R++F+VHG D+ +S+ + + L I E Sbjct: 152 DLRQSQRETPVSQPVTSPARDRRVFLVHGRDHRIKKSMVQLLRTFDLRVIEWEEAASYTG 211 Query: 188 -GSRTIIEKFEAESGDVSFAIVLMTPDDSGSALAS----------ESTRLRARQNVLYEL 236 GS T ++ A +VL TPDD G + R NV++E Sbjct: 212 SGSPTTMDIVTAGMEAAGAVVVLFTPDDLGRCRDEFLSDHDPQFERDLTPQPRMNVIFEA 271 Query: 237 GYFAGKLGRGKVLVLRKGDIEIPSDLAGVLYTELDEHGGWKRKLLSELAYAGVPFDKDK 295 G K R KV+++R G + SD+AGV Y ++ + +R L L G+ D + Sbjct: 272 GMAMQK-DREKVVLVRFGGVREMSDIAGVNYVQIKDTSDSRRDLGRRLRNTGLAVDMEN 329 >UniRef50_Q98RD6 Putative uncharacterized protein MYPU_0730 n=1 Tax=Mycoplasma pulmonis RepID=Q98RD6_MYCPU Length = 231 Score = 124 bits (310), Expect = 5e-27, Method: Composition-based stats. Identities = 52/161 (32%), Positives = 85/161 (52%), Gaps = 3/161 (1%) Query: 132 YQLYVENQHDPEPAVFRPVSRKIFIVHGHDNDALQSVARFISRIGLEEIILSERPDGSRT 191 L N D + + K+FIVHGHD AL + + + L +I + + Sbjct: 70 KNLSENNNSDNTTTMPNIKNDKVFIVHGHDKIALLELKDLLRDLKLNVVISQNKTTRGLS 129 Query: 192 IIEKFEAESGDVSFAIVLMTPDDSGSALASESTR--LRARQNVLYELGYFAGKLGRGKVL 249 I++ + VSFA L+TPDD G + ++ RARQNV++E+G GKL + K++ Sbjct: 130 ILDGVLEDISSVSFAFDLLTPDDKGYSNLDGESKTLPRARQNVIFEMGMLYGKLPKNKIM 189 Query: 250 VLRKGDIEIPSDLAGVLYTEL-DEHGGWKRKLLSELAYAGV 289 +L K D+E+PSD+ G++Y ++ + + +EL AGV Sbjct: 190 ILNKNDVELPSDINGMIYKSFKNDIKEIRYDIETELKEAGV 230 >UniRef50_C6AF08 Putative nucleotide-binding protein n=1 Tax=Bartonella grahamii as4aup RepID=C6AF08_BARGA Length = 151 Score = 123 bits (308), Expect = 8e-27, Method: Composition-based stats. Identities = 50/148 (33%), Positives = 79/148 (53%), Gaps = 9/148 (6%) Query: 152 RKIFIVHGHDNDALQSVARFISRIGLEEIILSERPDGSRTIIEKFEAESG----DVSFAI 207 KIFIV+ +++ L+ R + ++GLE +L D T IE F+ E F I Sbjct: 2 PKIFIVY-NNHTILEQTERVLFKLGLEPYVLKFGSD-DLTTIEDFKQEISMQTNSPKFGI 59 Query: 208 VLMTPDDSGSALASE--STRLRARQNVLYELGYFAGKLGRGKVLVLRKGDIEIPSDLAGV 265 VL+TPDD G A +++ + RA QNV++++G K+ + +L+K D+E+PSD G+ Sbjct: 60 VLLTPDDIGYAKSADKKDAQPRANQNVIFKMGMLFPKISCRNIAILKKRDVEVPSDYEGI 119 Query: 266 LYTELDEH-GGWKRKLLSELAYAGVPFD 292 Y +EH K++ L AG D Sbjct: 120 NYIPFNEHVKETLPKIVELLNTAGFNLD 147 >UniRef50_C2LG65 Putative uncharacterized protein n=1 Tax=Proteus mirabilis ATCC 29906 RepID=C2LG65_PROMI Length = 368 Score = 120 bits (301), Expect = 6e-26, Method: Composition-based stats. Identities = 44/246 (17%), Positives = 83/246 (33%), Gaps = 30/246 (12%) Query: 52 ELDTFLARSEDTESSMAGSAVLQWPDEPADILGLKLLLIEKMADDNNFSFNFCH------ 105 E + S + S+ + + P + L + IEK F H Sbjct: 112 EYEELFDESRNDILSLIYANKAKLPSD-DLFLQKIIEKIEKFKIYTERDFVDVHRPRGKL 170 Query: 106 ---TFFYDRNIIESIRKFTSSLVAPFVRD--------------YQLYVENQHDPEPAVFR 148 I + +R+ ++ N H+ E R Sbjct: 171 LSTDMDAISEGIRTPPHIAMIAKMACLRESYSRCIDLKKESIKLFSHISNLHEKETKASR 230 Query: 149 PVSRKIFIVHGHDNDALQSVARFISRIGLEEIILSERPDGSRTIIEKFEAESGDVSFAIV 208 + IF+ HG + + ++ L + P T I + SFA + Sbjct: 231 VGTN-IFLGHGRSHLWRELKDFIKDKLHLPYDEFNRVPIAGTTNIARLAQMLDHASFAFL 289 Query: 209 LMTPDDSGSALASESTRLRARQNVLYELGYFAGKLGRGKVLVLRKGDIEIPSDLAGVLYT 268 +MT +D + ++AR NV++E+G F G+LG K ++L + + S++ G+ Sbjct: 290 IMTAEDEL-----QDGNMQARMNVIHEVGLFQGRLGFEKAIILLEEGCQEFSNINGLGQI 344 Query: 269 ELDEHG 274 + Sbjct: 345 RFPKGN 350 >UniRef50_Q24ZU3 Putative uncharacterized protein n=1 Tax=Desulfitobacterium hafniense Y51 RepID=Q24ZU3_DESHY Length = 159 Score = 115 bits (288), Expect = 2e-24, Method: Composition-based stats. Identities = 38/152 (25%), Positives = 62/152 (40%), Gaps = 8/152 (5%) Query: 151 SRKIFIVHGHDNDALQSVARF---ISRIGLEEIILSER--PDGSRTIIEKFEAESGDVSF 205 S IF+ A + + I G ++ E V Sbjct: 10 SMNIFLGSSSSQKAKDDMLKIAMLIEEEGHTPFPWNKEGLFPLGEYPAESLRNICQQVDA 69 Query: 206 AIVLMTPDDSGSALASESTRLRARQNVLYELGYFAGKLGRGKVLVLRKGDIEIPSDLAGV 265 AI++ DD + L+ R NV+YE G F G LG + ++ R+G ++ SDL G+ Sbjct: 70 AILIFHEDDMT--WYRNNYVLKPRDNVVYEYGLFEGHLGPKRTIICRRGTPKLASDLEGI 127 Query: 266 LYTELDEHGGWKRKLLSELAYAGVPFDKDKAL 297 Y +LD+ + +L+ L + G P D + L Sbjct: 128 TYCDLDKEYRAQSELIKWLRFLG-PLDGIQKL 158 >UniRef50_Q0AJT7 Putative uncharacterized protein n=1 Tax=Nitrosomonas eutropha C91 RepID=Q0AJT7_NITEC Length = 242 Score = 114 bits (284), Expect = 5e-24, Method: Composition-based stats. Identities = 31/137 (22%), Positives = 52/137 (37%), Gaps = 11/137 (8%) Query: 153 KIFIVHGHDNDALQSVARFISRIGLEEIILSERPDGSRTIIEKFEAESGDVSFAIVLMTP 212 +FI HG + R+ L + P T + + A V+MT Sbjct: 106 NVFIGHGRSKVWRDLKDFIVERMRLPYDEFNRVPVAGITNTHRLNEMLDAAAIAFVVMTA 165 Query: 213 DDSGSALASESTRLRARQNVLYELGYFAGKLGRGKVLVLRKGDIEIPSDLAGVLYTELDE 272 +D ++ AR NV++E+G F G+LG K +VL + E S++ G+ + Sbjct: 166 EDE-----QADGKIEARTNVIHEVGLFQGRLGFTKAIVLLEEGCEEFSNIQGLGQIRFPK 220 Query: 273 HG------GWKRKLLSE 283 + L E Sbjct: 221 GDIASKFEDIRLVLERE 237 >UniRef50_Q3RAE9 Similar to nucleotide-binding protein containing TIR-like domain n=2 Tax=Xylella fastidiosa RepID=Q3RAE9_XYLFA Length = 114 Score = 112 bits (281), Expect = 1e-23, Method: Composition-based stats. Identities = 37/90 (41%), Positives = 53/90 (58%), Gaps = 1/90 (1%) Query: 152 RKIFIVHGHDNDALQSVARFISRIGLEEIILSERPDGSRTIIEKFEAESGDVSFAIVLMT 211 K+F+V+GHD+ A + + R LE +IL + P +TIIEK E + +V FA+VL T Sbjct: 3 SKVFVVYGHDDAARTELEAMLRRWKLEPLILDQLPSEGQTIIEKLEKYTAEVKFAVVLAT 62 Query: 212 PDDSGSALASESTRL-RARQNVLYELGYFA 240 PDD G E+ ++ RARQN G+ A Sbjct: 63 PDDEGFRACHENEKMFRARQNCCTGTGHDA 92 >UniRef50_A4AGR7 Putative uncharacterized protein n=1 Tax=marine actinobacterium PHSC20C1 RepID=A4AGR7_9ACTN Length = 264 Score = 112 bits (281), Expect = 1e-23, Method: Composition-based stats. Identities = 36/149 (24%), Positives = 69/149 (46%), Gaps = 10/149 (6%) Query: 129 VRDYQLYVENQHDPEPAVFRPVSR-KIFIVHGHDNDALQS--VARFISRIGLEEIILSER 185 V ++ +V ++ D + ++FI HG I I ++ ++ R Sbjct: 104 VEEFTQFVLDRCDQGKRIQLARKPLQVFIGHGRSEAWKDLKNHLTDIHHIKVDAYEVASR 163 Query: 186 PDGSRTIIEKFEAESGDVSFAIVLMTPDDSGSALASESTRLRARQNVLYELGYFAGKLGR 245 TI E ++ + A+++MT +D + +RARQNV++E G F G+LG Sbjct: 164 G--GFTIREVLDSMLKSSTLALLVMTAED-----TQDDGSMRARQNVVHEAGLFQGRLGF 216 Query: 246 GKVLVLRKGDIEIPSDLAGVLYTELDEHG 274 + L+L++ +E+ S++ GV + E Sbjct: 217 QRALILKERGVELMSNVDGVQFIEFAPGN 245 >UniRef50_B2FIX1 Putative uncharacterized protein n=1 Tax=Stenotrophomonas maltophilia K279a RepID=B2FIX1_STRMK Length = 256 Score = 112 bits (279), Expect = 2e-23, Method: Composition-based stats. Identities = 42/211 (19%), Positives = 74/211 (35%), Gaps = 20/211 (9%) Query: 77 DEPADILGLKLLLIEKMADDNNFSF-----NFCHTFFYDRNIIESIRKFTSSLVAPFVRD 131 + L + L + DD N F ++ + + +V+ Sbjct: 34 PLLDEALKVDLADGQWEFDDENEFFAAVPQGTGYSVYLSGRSVRLQVNQLRQRAVVYVKA 93 Query: 132 YQLYVENQ------HDPEPAVFRPVSRKIFIVHGHDNDALQ--SVARFISRIGLEEIILS 183 + V S +FI HG R +E Sbjct: 94 PTRANVQRIFGPFDSKQGTEVVPAASPVVFIGHGRSPAWKDLRDHLRDQHDYRIESYE-- 151 Query: 184 ERPDGSRTIIEKFEAESGDVSFAIVLMTPDDSGSALASESTRLRARQNVLYELGYFAGKL 243 +I + E+ + SFA+++MT +D S +RARQNV++E G F G+L Sbjct: 152 SGARAGHSIRDILESMAAKSSFALLVMTGEDM-----DASGEMRARQNVIHEAGIFQGRL 206 Query: 244 GRGKVLVLRKGDIEIPSDLAGVLYTELDEHG 274 G + ++L + D+ S++ GV Y + Sbjct: 207 GFSRAIMLLEEDVVEFSNVDGVQYIPFSKGR 237 >UniRef50_Q6AL85 Putative uncharacterized protein n=1 Tax=Desulfotalea psychrophila RepID=Q6AL85_DESPS Length = 258 Score = 111 bits (276), Expect = 4e-23, Method: Composition-based stats. Identities = 34/156 (21%), Positives = 66/156 (42%), Gaps = 5/156 (3%) Query: 131 DYQLYVENQHDPEPAVFRPVSRKIFIVHGHDNDALQSVARFISRIGLEEIILSERPDGSR 190 + + P+ + +FI HG + + ++ Sbjct: 105 EIFEKYATEDYVTPSPELEENLTVFIGHGGSSQWRDLKDHLQDKHNIKIEAYETGARAGH 164 Query: 191 TIIEKFEAESGDVSFAIVLMTPDDSGSALASESTRLRARQNVLYELGYFAGKLGRGKVLV 250 TI + E + +FA+++MT +D ++ +LRARQNV++E+G F G+LG + +V Sbjct: 165 TIRDILEDMVNNSTFALLVMTAEDE-----QDTGQLRARQNVIHEIGLFQGRLGFNRAIV 219 Query: 251 LRKGDIEIPSDLAGVLYTELDEHGGWKRKLLSELAY 286 L + E S++AGV ++L+ + Sbjct: 220 LMENSTEEFSNIAGVQQIRYSNITETFGEVLATIKR 255 >UniRef50_C5BHR5 Putative uncharacterized protein n=1 Tax=Teredinibacter turnerae T7901 RepID=C5BHR5_TERTT Length = 276 Score = 110 bits (275), Expect = 6e-23, Method: Composition-based stats. Identities = 30/129 (23%), Positives = 54/129 (41%), Gaps = 5/129 (3%) Query: 151 SRKIFIVHGHDNDALQSVARFISRIGLEEIILSER-PDGSRTIIEKFEAESGDVSFAIVL 209 ++FI ++ A+ E + S + I+ +S V FA+ + Sbjct: 3 KPRLFIASSSESLAIAEAVNVNLDHEFEITVWKNGTFKLSSSTIDDLVEKSSFVDFALFI 62 Query: 210 MTPDDSGSALASESTRLRARQNVLYELGYFAGKLGRGKVLVLRKGDIE--IPSDLAGVLY 267 PDD + + R NV++E+G F G +G+ + +L+ IE +P+DL GV Sbjct: 63 FAPDDISEIRSRKEHV--VRDNVIFEMGLFVGAIGKSRSFILKPRGIEMHLPTDLLGVTP 120 Query: 268 TELDEHGGW 276 + D Sbjct: 121 ADYDAGRSD 129 >UniRef50_A3EJX2 SH3 domain protein n=2 Tax=Vibrionaceae RepID=A3EJX2_VIBCH Length = 297 Score = 110 bits (274), Expect = 7e-23, Method: Composition-based stats. Identities = 34/143 (23%), Positives = 62/143 (43%), Gaps = 5/143 (3%) Query: 151 SRKIFIVHGHDNDALQSVARFISRIGLEEIILSERPDGSRTIIEKFEAESGDVSFAIVLM 210 ++FI ++ + S +E I + + + ++ +V FA+ + Sbjct: 18 KPRLFIGSSSESYDVASACNACLDRKVEVTIWDKIFNSGGDTLTSLTEKAKNVDFALFIF 77 Query: 211 TPDDSGSALASESTRLRARQNVLYELGYFAGKLGRGKVLVLRK--GDIEIPSDLAGVLYT 268 P+D ++ + R NVL+ELG F G LG+ + +L+ D+ +P+DL GV Sbjct: 78 RPEDLTMMR--DNPKPTVRDNVLFELGLFIGALGKDRCFILKPRNEDLHMPTDLLGVNMN 135 Query: 269 ELDEHGGWKRKLLSELAYAGVPF 291 + D H L S + A F Sbjct: 136 DYDPHRSD-GDLESAVNAACTRF 157 >UniRef50_Q480E8 Conserved domain protein n=5 Tax=Gammaproteobacteria RepID=Q480E8_COLP3 Length = 280 Score = 109 bits (272), Expect = 1e-22, Method: Composition-based stats. Identities = 37/144 (25%), Positives = 62/144 (43%), Gaps = 6/144 (4%) Query: 151 SRKIFIVHGHDNDALQSVARFISRIGLEEIILSER-PDGSRTIIEKFEAESGDVSFAIVL 209 +IFI ++ + E I + S ++ +S V F+ + Sbjct: 3 KPRIFIGSSVESLPIADAIAENLEFDAEVTIWRSGTFNLSSNTLDDLILKSKSVDFSAFI 62 Query: 210 MTPDDSGSALASESTRLRARQNVLYELGYFAGKLGRGKVLVLRKGDIEI--PSDLAGVLY 267 +PDD + E + R NVL+ELG F G +G+ + +++ D+E+ PSDL G+ Sbjct: 63 FSPDDLAIMRSRE--QYVVRDNVLFELGLFIGSIGKERCFIIKPRDVELHFPSDLLGITP 120 Query: 268 TELDEHGGWKRKLLSELAYAGVPF 291 T+ D + L S L YA Sbjct: 121 TDYDPNRSDDN-LTSSLTYASTQI 143 >UniRef50_A3INK0 Putative uncharacterized protein n=1 Tax=Cyanothece sp. CCY0110 RepID=A3INK0_9CHRO Length = 264 Score = 108 bits (269), Expect = 3e-22, Method: Composition-based stats. Identities = 37/153 (24%), Positives = 60/153 (39%), Gaps = 9/153 (5%) Query: 150 VSRKIFIVHGHDNDALQSVARFISRIGLEEIILSER-PDGSRTIIEKFEAESGDVSFAIV 208 + K+FI + + A+ E + ++ + S ++ FAI Sbjct: 1 MKLKVFIGSSFEGLDVAYAAQKNLDHTGEVTVWNQGIFELSSNTLDDLVNSLDKFDFAIF 60 Query: 209 LMTPDDSGSALASESTRLRARQNVLYELGYFAGKLGRGKVLVLRKGDIE---IPSDLAGV 265 + +PDD E R NV++ELG F KLG+ + +L I+ +PSDL GV Sbjct: 61 VFSPDDISHIR--EQKYQAVRDNVIFELGLFIAKLGKRRCFILMPRGIKDFRLPSDLLGV 118 Query: 266 LYTELDEHGGWKRKLLSELAYAGVPFDKDKALS 298 D L + L A KA++ Sbjct: 119 TPATYDNSRQDNNLLAA-LGPACFDI--SKAIN 148 >UniRef50_C7PYD3 Putative uncharacterized protein n=1 Tax=Catenulispora acidiphila DSM 44928 RepID=C7PYD3_CATAD Length = 585 Score = 107 bits (268), Expect = 3e-22, Method: Composition-based stats. Identities = 38/169 (22%), Positives = 60/169 (35%), Gaps = 15/169 (8%) Query: 139 QHDPEPAVFRPVSRKIFIVHGHDNDALQSVARFISRIGLEEIILSERPDGSRTII----E 194 +PE A +F++HG D A + + GL + E + + Sbjct: 395 PVNPEAAYQVTDKDTVFVIHGRDERARVATFDLLRAFGLHPVEWDEAVGLLQQPMPFLGR 454 Query: 195 KFEAESGDVSFAIVLMTPDDSGSALA----------SESTRLRARQNVLYELGYFAGKLG 244 +V+MTPDD ++AR NVL ELG Sbjct: 455 VLREAIPRAKAVVVIMTPDDIVRLHPELAGPSEPGFETGHSMQARPNVLIELGMALAYHP 514 Query: 245 RGKVLVLRKGDIEIPSDLAGVLYTELDEHGGWKRKLLSELAYAGVPFDK 293 R L+L+ GD +DL G Y + E ++ ++ L+YA Sbjct: 515 RA-TLILQVGDHRPIADLGGFNYVRVAEGTAFRERIGKRLSYADCRVSM 562 >UniRef50_C9PBW9 Putative uncharacterized protein n=2 Tax=Vibrio RepID=C9PBW9_VIBFU Length = 277 Score = 107 bits (268), Expect = 3e-22, Method: Composition-based stats. Identities = 30/129 (23%), Positives = 55/129 (42%), Gaps = 5/129 (3%) Query: 151 SRKIFIVHGHDNDALQSVARFISRIGLEEIILSER-PDGSRTIIEKFEAESGDVSFAIVL 209 ++FI ++ + E I S T I+ +S V FA+ + Sbjct: 3 KPRLFIASSAESLPIAEAVNVNLDHDFEVTIWKNGTFKLSSTTIDDLVEKSSTVDFALFI 62 Query: 210 MTPDDSGSALASESTRLRARQNVLYELGYFAGKLGRGKVLVLRKGDIE--IPSDLAGVLY 267 PDD S + + R NV++E+G F G +G+ + +L+ ++E +P+DL GV Sbjct: 63 FAPDDITSIRSRKEHV--VRDNVIFEMGLFVGAIGKSRSFILKPRNVEMHLPTDLLGVTP 120 Query: 268 TELDEHGGW 276 + + Sbjct: 121 ADYEATRSD 129 >UniRef50_C6N7T4 Putative uncharacterized protein n=1 Tax=Legionella drancourtii LLAP12 RepID=C6N7T4_9GAMM Length = 260 Score = 107 bits (267), Expect = 4e-22, Method: Composition-based stats. Identities = 35/136 (25%), Positives = 62/136 (45%), Gaps = 5/136 (3%) Query: 138 NQHDPEPAVFRPVSRKIFIVHGHDNDALQSVARFISRIGLEEIILSERPDGSRTIIEKFE 197 ++ + + +FI HG +D + + TI + E Sbjct: 109 DKFKLDKVPMQVNKIIVFIGHGRSDDWKIIKDDLQDKHKITIESFESGARAGHTIRDILE 168 Query: 198 AESGDVSFAIVLMTPDDSGSALASESTRLRARQNVLYELGYFAGKLGRGKVLVLRKGDIE 257 S +FAI+++T +D + +RARQNV++E G F GKLG + +++ + D+E Sbjct: 169 EMSTTSNFAILVLTAEDEL-----KDGSIRARQNVIHEAGLFQGKLGFNRAIIVLQEDVE 223 Query: 258 IPSDLAGVLYTELDEH 273 IPS+L G+ E+ Sbjct: 224 IPSNLDGIQQLRYKEN 239 >UniRef50_A7G517 Conserved domain protein n=3 Tax=Clostridium botulinum A RepID=A7G517_CLOBH Length = 206 Score = 107 bits (267), Expect = 5e-22, Method: Composition-based stats. Identities = 30/137 (21%), Positives = 51/137 (37%), Gaps = 5/137 (3%) Query: 148 RPVSRKIFIVHGHDNDALQSVARFISRIGLEEIILSER-PDGSRTIIEKFEAESGDVSFA 206 KIFI ++ + + E + ++ S ++ + Sbjct: 57 EIKKPKIFIGSSKEHLDVAYSLQEALEYSAEPTVWTQGIFKLSSNTLDDLYNNIKGMDAG 116 Query: 207 IVLMTPDDSGSALASESTRLRARQNVLYELGYFAGKLGRGKVLVLRKGDI--EIPSDLAG 264 I + TPDD E++ R NV++ELG G LG+ V + IPSDLAG Sbjct: 117 IFIFTPDDISDIR--ENSVSVVRDNVIFELGLAIGILGKQNVFYIIPRGCDFHIPSDLAG 174 Query: 265 VLYTELDEHGGWKRKLL 281 + + D + + Sbjct: 175 ITPGDYDANRSDDNLVA 191 >UniRef50_C1F5N0 Cyclic nucleotide-binding domain protein n=2 Tax=Bacteria RepID=C1F5N0_ACIC5 Length = 302 Score = 107 bits (266), Expect = 7e-22, Method: Composition-based stats. Identities = 36/166 (21%), Positives = 66/166 (39%), Gaps = 11/166 (6%) Query: 123 SLVAPFVRDYQLYVENQHDPEPAVFRPVSRKIFIVHGHD--NDALQSVARFISRIGLEEI 180 ++ ++ + ++ +V + ++FI+ + + A F Sbjct: 126 QILLQMAKELARRLMQRNALVTSVSDRI--RVFIISSAEALDIARTIQNAFDHD-PFNVT 182 Query: 181 ILSER-PDGSRTIIEKFEAESGDVSFAIVLMTPDDSGSALASESTRLRARQNVLYELGYF 239 + ++ S IE E AI + PDD + R R NV++ELG+F Sbjct: 183 VWTDGVFRASHYAIESLERALDQSDVAIAVAQPDDITESRGQ--QRATPRDNVIFELGFF 240 Query: 240 AGKLGRGKVLVLRKGDIE--IPSDLAGVLYTELD-EHGGWKRKLLS 282 G+LGR + L++ E +PSDLAG+ + R L + Sbjct: 241 MGRLGRHRALLVEPRGEEISLPSDLAGINTITYRYDTSDLTRSLAT 286 >UniRef50_B9TGA1 Putative uncharacterized protein n=1 Tax=Ricinus communis RepID=B9TGA1_RICCO Length = 249 Score = 107 bits (266), Expect = 7e-22, Method: Composition-based stats. Identities = 29/136 (21%), Positives = 53/136 (38%), Gaps = 6/136 (4%) Query: 150 VSRKIFIVHGHDNDALQSVARFISRIGLEEIILSER-PDGSRTIIEKFEAESGDVSFAIV 208 + KIFI + + + E + S S T I + F + Sbjct: 1 MKPKIFIGSSREGLDIANAIHANLTRDAECTVWSNGVFQISGTTIYSLINALRNSDFGVF 60 Query: 209 LMTPDDSGSALASESTRLRARQNVLYELGYFAGKLGRGKVLVLRKGDI---EIPSDLAGV 265 + +PDD ++ R NV++ELG F G+LG + + + +P+DL G+ Sbjct: 61 VFSPDDLTIMRGQQN--PVVRDNVIFELGLFIGRLGVERCFFITPDHVADLRLPTDLMGI 118 Query: 266 LYTELDEHGGWKRKLL 281 + + + + K L Sbjct: 119 MPGQYEANRHDKNWLA 134 >UniRef50_C3DUD8 Nucleotide-binding protein containing TIR-like domain n=2 Tax=Bacteria RepID=C3DUD8_BACTS Length = 73 Score = 105 bits (262), Expect = 2e-21, Method: Composition-based stats. Identities = 32/72 (44%), Positives = 42/72 (58%) Query: 226 LRARQNVLYELGYFAGKLGRGKVLVLRKGDIEIPSDLAGVLYTELDEHGGWKRKLLSELA 285 +RARQNV++E GY +LGR V L K +IE P+D++GV+Y D GW L EL Sbjct: 1 MRARQNVVFEHGYLIARLGRSNVCALVKDNIEKPNDISGVVYVNYDSGNGWHMALFKELK 60 Query: 286 YAGVPFDKDKAL 297 AG D +K Sbjct: 61 NAGYELDANKLF 72 >UniRef50_C5CLS5 TPR repeat-containing protein n=1 Tax=Variovorax paradoxus S110 RepID=C5CLS5_VARPS Length = 500 Score = 103 bits (257), Expect = 7e-21, Method: Composition-based stats. Identities = 34/152 (22%), Positives = 60/152 (39%), Gaps = 15/152 (9%) Query: 151 SRKIFIVHGHDNDALQSVARFISRIGLEEIILSER-PDGSRTIIEKFEAESGDVSFAIVL 209 ++FI + + + E + + D S T IE D FAI + Sbjct: 3 KPRVFIGSSVEGLPVAYAVQQNLLHDAESTVWDQGVFDLSSTTIESLTKMLHDSDFAIFV 62 Query: 210 MTPDDSGSALASESTRLRARQNVLYELGYFAGKLGRGKVLVLRKGD--IEIPSDLAGVLY 267 + DD +ES R NV++E G F G+LGR +V L + +P+DL G+ Sbjct: 63 FSADDMLKIRKTESLS--VRDNVMFEFGLFVGRLGRERVFFLLPQNEVFHLPTDLLGITG 120 Query: 268 TELDEHGG----------WKRKLLSELAYAGV 289 + + + ++ +++ GV Sbjct: 121 GKYETNRSDGSVQAATGPATNQIRTQMKALGV 152 >UniRef50_C7R666 Nucleotide-binding protein containing TIR-like domain n=1 Tax=Kangiella koreensis DSM 16069 RepID=C7R666_KANKD Length = 287 Score = 103 bits (256), Expect = 8e-21, Method: Composition-based stats. Identities = 33/133 (24%), Positives = 48/133 (36%), Gaps = 6/133 (4%) Query: 151 SRKIFIVHGHDNDALQSVARFISRIGLEEIILSERPDGSRTIIEKFEAESGDVSFAIVLM 210 +FI + ++ + D S I + + F I + Sbjct: 4 KPNVFIASSVEGLSVAEAVNIKMEYDAQVKQWDNAFDLSSVTITSLIKRAKETEFGIFVF 63 Query: 211 TPDDSGSALASESTRLRARQNVLYELGYFAGKLGRGKVLVLRKG----DIEIPSDLAGVL 266 PDD E+ R NVL+ELG F G LG + VL + +P+DLAGV Sbjct: 64 HPDDKTIIR--ENEYSTVRDNVLFELGLFIGSLGIERCFVLIPKSKETEFRLPADLAGVT 121 Query: 267 YTELDEHGGWKRK 279 T D+ K Sbjct: 122 TTSYDDQLEDKVD 134 >UniRef50_Q9X882 Putative uncharacterized protein SCO3290 n=1 Tax=Streptomyces coelicolor RepID=Q9X882_STRCO Length = 249 Score = 103 bits (256), Expect = 1e-20, Method: Composition-based stats. Identities = 36/169 (21%), Positives = 60/169 (35%), Gaps = 15/169 (8%) Query: 138 NQHDPEPAVFRPVSRKIFIVHGHDNDALQSVARFISRIGLEEIILSE----RPDGSRTII 193 + +R +F+VHG D+ + + + R+ L + S + Sbjct: 60 RRPAAPVPGDAERARSVFVVHGRDDQVRREMYELLRRLDLRPKEWEDLVRATGQASPFLG 119 Query: 194 EKFEAESGDVSFAIVLMTPDDS--------GSALASESTRL--RARQNVLYELGYFAGKL 243 + A+VL+TPDD G TR + R NVL ELG Sbjct: 120 DVVAGAPAQAQAALVLLTPDDVVTLHPELRGHNEPDHETRPVCQPRPNVLIELGMVLMAY 179 Query: 244 GRGKVLVLRKGDIEIPSDLAGVLYTELDEHGGWKRKLLSELAYAGVPFD 292 + L++ G + +D+AG D K++ L AG + Sbjct: 180 -PERTLIVEVGGVRPIADIAGRNVIRFDGSDTALGKVVERLKLAGCTVN 227 >UniRef50_A9A6G6 Tetratricopeptide domain protein n=1 Tax=Methanococcus maripaludis C6 RepID=A9A6G6_METM6 Length = 481 Score = 101 bits (252), Expect = 2e-20, Method: Composition-based stats. Identities = 29/130 (22%), Positives = 53/130 (40%), Gaps = 5/130 (3%) Query: 150 VSRKIFIVHGHDNDALQSVARFISRIGLEEIILSER-PDGSRTIIEKFEAESGDVSFAIV 208 + ++FI + + + + E I + + S+T IE E F I Sbjct: 1 MKPRVFIGSSVEGVNVAEAIQRHLKDDAEVKIWHQGVFELSKTSIESLENALDSFDFGIF 60 Query: 209 LMTPDDSGSALASESTRLRARQNVLYELGYFAGKLGRGKVLVLRKGD--IEIPSDLAGVL 266 + +D E + R N+++E G F GKL R +V + + +P+DL G+ Sbjct: 61 VFNNEDILKIRGEE--KSAVRDNLIFEFGLFIGKLTRERVFFVIPSGSDLHLPTDLLGIT 118 Query: 267 YTELDEHGGW 276 Y + D + Sbjct: 119 YGQYDANQSD 128 >UniRef50_C6JHS1 Predicted protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JHS1_9FIRM Length = 318 Score = 101 bits (251), Expect = 3e-20, Method: Composition-based stats. Identities = 33/159 (20%), Positives = 61/159 (38%), Gaps = 15/159 (9%) Query: 153 KIFIVHGHDND-ALQSVARFISRIGLEEIILSE--RPDGSRTIIEKFEAESGDVSFAIVL 209 +IFI + V ++ + +E ++ +E + S +V A+ + Sbjct: 2 RIFIASSGERLNMAIEVGSWLESMNVEPVLWNEPEVFPLGVYTWDALIDLSKNVDAAVFI 61 Query: 210 MTPDDSGSALASESTRLRARQNVLYELGYFAGKLGRGKVLVLRKGDIEIPSDLAGVLYTE 269 DD + R NVL E G F+GKL + + L +G ++ SDL G+ + + Sbjct: 62 FGEDD--KIWFRGEGTMTVRDNVLLEYGLFSGKLSKVNTIFLCEGRPKLASDLEGITWGD 119 Query: 270 LDEHGGWKRKLLSEL---------AYAGVPF-DKDKALS 298 + + K KL + + G D + A Sbjct: 120 VGKKNSAKIKLKNWINSIRTNNQKKVEGFKITDLNDAFQ 158 >UniRef50_C4ZIE6 Putative uncharacterized protein n=1 Tax=Thauera sp. MZ1T RepID=C4ZIE6_THASP Length = 303 Score = 101 bits (250), Expect = 5e-20, Method: Composition-based stats. Identities = 35/125 (28%), Positives = 61/125 (48%), Gaps = 2/125 (1%) Query: 152 RKIFIVHGHDNDALQ-SVARFISRIGLEEIILSERPDGSRTIIEKFEAESGDVSFAIVLM 210 R IF+ + + + + R+++ + RTII++ E + I L Sbjct: 165 RDIFLGYCSSSASTAAQIKRYLASQNASVLDWQSDFIPGRTIIDQIEEAASRSIAGIFLF 224 Query: 211 TPDDSGSALASESTRLRARQNVLYELGYFAGKLGRGKVLVLRKGDIEIPSDLAGVLYTEL 270 T DD A SE+ + R NV++E GYF+G G+ VL++R+ ++P+DL G +Y L Sbjct: 225 TKDD-DLANPSEAHQSVPRDNVVFEAGYFSGLKGKRNVLIVREAGSKMPADLGGDIYAAL 283 Query: 271 DEHGG 275 + Sbjct: 284 MDRND 288 >UniRef50_B0PHL7 Putative uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PHL7_9FIRM Length = 328 Score = 100 bits (249), Expect = 6e-20, Method: Composition-based stats. Identities = 35/139 (25%), Positives = 56/139 (40%), Gaps = 5/139 (3%) Query: 139 QHDPEPAVFRPVSRKIFIVHGHD-NDALQSVARFISRIGLEEIILSERP-DGSRTIIEKF 196 + R V +IFI + + V + IG + I+ S+ + +E Sbjct: 2 ETAKGEDAMRSVEDRIFIASSAEGKKYAKIVKASLENIG-KVILWSDNFFRLGESTLENL 60 Query: 197 EAESGDVSFAIVLMTPDDSGSALASESTRLRARQNVLYELGYFAGKLGRGKVLVLRKGDI 256 ++ +A+VL T DD AR NVL+E G F G L R + L + + Sbjct: 61 CKQAAGFDYAVVLYTKDDHAVVRK--KQCFTARDNVLFEHGIFTGVLSRYRTFALIQKGV 118 Query: 257 EIPSDLAGVLYTELDEHGG 275 +PSDL+G+ Y Sbjct: 119 RVPSDLSGITYIFFKNEKD 137 >UniRef50_B3QDT6 Putative uncharacterized protein n=3 Tax=Rhodopseudomonas palustris RepID=B3QDT6_RHOPT Length = 291 Score = 100 bits (248), Expect = 7e-20, Method: Composition-based stats. Identities = 32/159 (20%), Positives = 60/159 (37%), Gaps = 16/159 (10%) Query: 148 RPVSRKIFIVHGHDNDALQSVARFISRIGLEEIILSE---RPDGSRT--IIEKFEAESGD 202 R + IF+VHG DN +S+ + + L+ + + R + + + Sbjct: 101 RTTGKTIFVVHGRDNALRESMFALLRALDLDPLEWDQAIRRARRGANPFVGDVIDTVMDQ 160 Query: 203 VSFAIVLMTPDDSGSALA----------SESTRLRARQNVLYELGYFAGKLGRGKVLVLR 252 +V++TPDD + +AR NVL+E G G+ K L+++ Sbjct: 161 AQAVLVMLTPDDLVQLKGVFVEPHELDTEGRQQSQARPNVLFEAGLAMGRH-PEKTLMVQ 219 Query: 253 KGDIEIPSDLAGVLYTELDEHGGWKRKLLSELAYAGVPF 291 G ++ SD+ G + + L+ L Sbjct: 220 IGHVKPFSDIGGRHMLRFNGSPASRNDLVGRLEMLRCDL 258 >UniRef50_A3IZP6 Putative uncharacterized protein n=1 Tax=Cyanothece sp. CCY0110 RepID=A3IZP6_9CHRO Length = 320 Score = 100 bits (248), Expect = 7e-20, Method: Composition-based stats. Identities = 31/136 (22%), Positives = 55/136 (40%), Gaps = 8/136 (5%) Query: 152 RKIFIVHGHDNDALQSVARFISRIGLEEIILSER-PDGSRTIIEKFEAESGDVSFAIVLM 210 +FI +N + E + ++ S++ +E + + F+I + Sbjct: 10 PAVFIGSSAENLDYAYAIQANLERDAEPTVWNQDLFKLSQSTLEDLCRQVENFDFSIFVF 69 Query: 211 TPDDSGSALASESTRLRARQNVLYELGYFAGKLGRGKVLVLRKGD--IEIPSDLAGV--- 265 TP+D+ E+ R NV++ELG F G LGR + + +P+DL G+ Sbjct: 70 TPNDTVIIRKEENRS--VRDNVVFELGLFIGNLGRNRCFFIIPRGEEFHLPTDLLGIKAG 127 Query: 266 LYTELDEHGGWKRKLL 281 Y + WK L Sbjct: 128 TYDSSRQDKNWKAALG 143 >UniRef50_Q027G3 Nucleotide-binding protein n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q027G3_SOLUE Length = 316 Score = 100 bits (248), Expect = 8e-20, Method: Composition-based stats. Identities = 29/123 (23%), Positives = 50/123 (40%), Gaps = 4/123 (3%) Query: 150 VSRKIFIVHGHDND--ALQSVARFISRIGLEEIILSERPDGSRTIIEKFEAESGDVSFAI 207 + R+IFI + A S +E ++ +E E E A+ Sbjct: 1 MKRRIFIGSSTEGLPHACHIKELLTSFGDIEPVLWTEIFHPGLLTFEALENVLLRCCAAV 60 Query: 208 VLMTPDDSGSALASESTRLRARQNVLYELGYFAGKLGRGKVLVLRKGDIEIPSDLAGVLY 267 + + DD + RA NV+ E G AG++GR + + G ++PSDL G+ Sbjct: 61 FVASADDVTTFRGQCIHTPRA--NVMLEFGLVAGRIGRHSIALCLAGGAQLPSDLQGLTV 118 Query: 268 TEL 270 ++ Sbjct: 119 IDM 121 >UniRef50_B1WT66 Putative uncharacterized protein n=1 Tax=Cyanothece sp. ATCC 51142 RepID=B1WT66_CYAA5 Length = 891 Score = 99.5 bits (246), Expect = 1e-19, Method: Composition-based stats. Identities = 33/153 (21%), Positives = 54/153 (35%), Gaps = 9/153 (5%) Query: 113 IIESIRKFTSSLVAPFVRDYQLYVENQHDPEPAVFRPVSRKIFIVHGHD--NDALQSVAR 170 II + L D L + + + + K+FI + N A V Sbjct: 682 IIIQEDLQLNQLAKFLHLDISLGKGTKSSARKTMSQ-IPPKVFIGSSSEYLNIANTVVQL 740 Query: 171 FISRIGLEEIILSERPDGS----RTIIEKFEAESGDVSFAIVLMTPDDSGSALASESTRL 226 + ++ + +T +E E F I ++ PDD + E Sbjct: 741 LAEDPNIHPVLWKDSDSFGAFGLQTPLESLEDVVNKYDFGIFILAPDDDRLSRGREEKV- 799 Query: 227 RARQNVLYELGYFAGKLGRGKVLVLRKGDIEIP 259 AR NV++ELG F GK R V ++ + P Sbjct: 800 -ARDNVIFELGLFMGKKTRKGVFIIMPQYLIDP 831 >UniRef50_A5KMN9 Putative uncharacterized protein n=1 Tax=Ruminococcus torques ATCC 27756 RepID=A5KMN9_9FIRM Length = 323 Score = 99.1 bits (245), Expect = 2e-19, Method: Composition-based stats. Identities = 28/140 (20%), Positives = 52/140 (37%), Gaps = 1/140 (0%) Query: 144 PAVFRPVSRKIFIVHGHDNDALQSVARFISRIGLEEIIL-SERPDGSRTIIEKFEAESGD 202 + +IFI ++ + + + + D + + +S Sbjct: 2 KKAGERMKPRIFIGSSKESVKIAEKVKSLLDGEYVCQLWCDNFFDLGQCTYHELLKKSLS 61 Query: 203 VSFAIVLMTPDDSGSALASESTRLRARQNVLYELGYFAGKLGRGKVLVLRKGDIEIPSDL 262 +AI + DD + + + AR NV E G +AG L + L + +I SDL Sbjct: 62 FDYAIFIGGKDDYVRRESDRTHKYAARDNVYLEFGLYAGILTYARCFFLIQEGCQIASDL 121 Query: 263 AGVLYTELDEHGGWKRKLLS 282 GV D+ +K+L+ Sbjct: 122 LGVNVVFFDKMQDLSKKILT 141 >UniRef50_C6MH81 Nucleotide-binding protein containing TIR-like domain-like protein n=1 Tax=Nitrosomonas sp. AL212 RepID=C6MH81_9PROT Length = 287 Score = 99.1 bits (245), Expect = 2e-19, Method: Composition-based stats. Identities = 32/134 (23%), Positives = 54/134 (40%), Gaps = 5/134 (3%) Query: 150 VSRKIFIVHGHDNDALQSVARFISRIGLEEIILSERPDGSRTIIEKFEAESGDVSFAIVL 209 +IFI ++ E +I SE + +++ + V +A + Sbjct: 3 KKPRIFIASSTESLKTAEALNVNLDRSAETVIWSES-KLLQNYVDRLLELTRSVDYAAFI 61 Query: 210 MTPDDSGSALASESTRLRARQNVLYELGYFAGKLGRGKVLVLRKG--DIEIPSDLAGVLY 267 TPDD E + R NVL+ELG F G LG+ + ++ D IPSDL G+ Sbjct: 62 FTPDDLIIMRGHE--KSAIRDNVLFELGLFMGSLGKERCFIIHPRNSDHHIPSDLLGLTS 119 Query: 268 TELDEHGGWKRKLL 281 + + + + Sbjct: 120 LDYEINRTDNDLIA 133 >UniRef50_Q0YSC4 Putative uncharacterized protein n=1 Tax=Chlorobium ferrooxidans DSM 13031 RepID=Q0YSC4_9CHLB Length = 253 Score = 97.2 bits (240), Expect = 7e-19, Method: Composition-based stats. Identities = 26/133 (19%), Positives = 59/133 (44%), Gaps = 2/133 (1%) Query: 138 NQHDPEPAVFRPVSRKIFIVHGHDNDALQSVARFISRIGLEEIILSERPDGSRTIIEKFE 197 + +P P ++K+FI HG + ++ + + +S +E ++ E+ S+ + EK Sbjct: 99 SPQNPIPVTPAQNNKKVFITHGKNKTFIEPIKKLLSFGEMEPVVSVEKQSVSQPVPEKVM 158 Query: 198 AESGDVSFAIVLMTPDDSGSALASESTRLRARQNVLYELGYFAGKLGRGKVLVLRKGDIE 257 + + AI + D+ + NVL E+G + + +++ K ++ Sbjct: 159 HDMRECGAAI-IHVEDELTLLDKDAKEHVMLNPNVLIEIGAAMALY-KKRFILIVKEGVK 216 Query: 258 IPSDLAGVLYTEL 270 +PS+L G+ Sbjct: 217 LPSNLQGLYEVRY 229 >UniRef50_Q7MKB6 Putative uncharacterized protein VV1889 n=1 Tax=Vibrio vulnificus YJ016 RepID=Q7MKB6_VIBVY Length = 293 Score = 96.8 bits (239), Expect = 8e-19, Method: Composition-based stats. Identities = 30/135 (22%), Positives = 55/135 (40%), Gaps = 6/135 (4%) Query: 146 VFRPVSRKIFIVHGHDNDALQSVARFISRIGLEEIILSER-PDGSRTIIEKFEAESGDVS 204 + + K+FI + + + E + S+ + +++ + + Sbjct: 1 MVKKNKPKLFIGSSVEGLEVAYAIQSELEHDSEPTVWSQGVFNLTQSTLSDLLSALDTFD 60 Query: 205 FAIVLMTPDDSGSALASESTRLRARQNVLYELGYFAGKLGRGKVLVLRK---GDIEIPSD 261 AI +M+PDD E + R NVL+ELG F G+LG K +++ D +P+D Sbjct: 61 AAIFVMSPDDVVKMRGQE--QTVTRDNVLFELGMFIGRLGPEKTFMVKPRNSQDFHVPTD 118 Query: 262 LAGVLYTELDEHGGW 276 L G+ D Sbjct: 119 LLGLTPGVYDNERSD 133 >UniRef50_B1M988 Cyclic nucleotide-binding n=4 Tax=Proteobacteria RepID=B1M988_METRJ Length = 303 Score = 96.4 bits (238), Expect = 1e-18, Method: Composition-based stats. Identities = 30/150 (20%), Positives = 58/150 (38%), Gaps = 8/150 (5%) Query: 126 APFVRDYQLYVENQHDPEPAVFRPVSRKIFIVHGHD--NDALQSVARFISRIGLEEIILS 183 ++ +E ++ ++F+ + A L + + Sbjct: 129 RRMAQELARRLEQRNAL--IRPANEKPRVFLFSSSEALPVARAIENALADDPFLTVVWAN 186 Query: 184 ERPDGSRTIIEKFEAESGDVSFAIVLMTPDDSGSALASESTRLRARQNVLYELGYFAGKL 243 + +E E E FA+ + PDD E R NV++ELG+F G L Sbjct: 187 GVFKVTNYTLETLEEELMQSDFAVAVAHPDDKTEIRDEEW--PTPRDNVVFELGFFMGSL 244 Query: 244 GRGKVLVLRKGD--IEIPSDLAGVLYTELD 271 GR + +++ +++PSDLAG+ + + Sbjct: 245 GRQRAVLMEPKGAKLKLPSDLAGITTIKYN 274 >UniRef50_Q8TKX7 Predicted protein n=1 Tax=Methanosarcina acetivorans RepID=Q8TKX7_METAC Length = 469 Score = 95.6 bits (236), Expect = 2e-18, Method: Composition-based stats. Identities = 37/143 (25%), Positives = 64/143 (44%), Gaps = 8/143 (5%) Query: 148 RPVSRKIFIVHGHDNDALQSVARFISRIGLEEIILSER-PDGSRTIIEKFEAESGDVSFA 206 + FI + + + I + + +E E FA Sbjct: 2 QNKKVSAFIGSSKEGLGIAQAIQLELEEYATCTIWYQGIFGLNEGTLESLEKSLEKFEFA 61 Query: 207 IVLMTPDDSGSALASESTRLRARQNVLYELGYFAGKLGRGKVLVLR--KGDIEIPSDLAG 264 I+++TPDD + + R NVL+ELG F G+LGR +V ++ + ++++PSDLAG Sbjct: 62 ILVLTPDDVVISR--DKVVQLPRDNVLFELGLFMGRLGRKRVFIVYCDEENVKLPSDLAG 119 Query: 265 VLYTEL---DEHGGWKRKLLSEL 284 V + DE+ K+ ++EL Sbjct: 120 VTVCRISKPDENKELKKYSITEL 142 >UniRef50_B7L3G5 Cyclic nucleotide-binding n=1 Tax=Methylobacterium chloromethanicum CM4 RepID=B7L3G5_METC4 Length = 300 Score = 95.6 bits (236), Expect = 2e-18, Method: Composition-based stats. Identities = 28/153 (18%), Positives = 54/153 (35%), Gaps = 8/153 (5%) Query: 126 APFVRDYQLYVENQHDPEPAVFRPVSRKIFIVHGHD--NDALQSVARFISRIGLEEIILS 183 + + ++ P ++ +V + A +E + Sbjct: 129 QAMADEMAERLAERNATLPDGNER--PRVLVVSSSEGLKTARALRQELGKDEDIEVEVWE 186 Query: 184 ERPDGSRTIIEKFEAESGDVSFAIVLMTPDDSGSALASESTRLRARQNVLYELGYFAGKL 243 + S ++ E F + +M DD ++ E R NV+ E G GKL Sbjct: 187 QIFAISSYPLDALEEAMKRADFVVAIMRGDDI--VVSREMESRAPRDNVILEYGMALGKL 244 Query: 244 GRGKVLVLRKGDI--EIPSDLAGVLYTELDEHG 274 GR + L++ +I ++ SD +G+ Y E Sbjct: 245 GRNRTLMMVPKEIQTKLASDNSGLTYVPYTERD 277 >UniRef50_Q12DK8 Putative uncharacterized protein n=5 Tax=cellular organisms RepID=Q12DK8_POLSJ Length = 433 Score = 95.6 bits (236), Expect = 2e-18, Method: Composition-based stats. Identities = 34/164 (20%), Positives = 66/164 (40%), Gaps = 25/164 (15%) Query: 137 ENQHDPEPAVFR---PVSRKIFIVHGHDNDALQSVARFISRIGLEEIILSERPDGSRTII 193 ++ DP + P +R + G D A F+ ++GLE +L + Sbjct: 292 MSKADPSSITAQQAVPGTRVAVLGWGGD--AAGQACEFMEQLGLEAAVLD------TVSV 343 Query: 194 EKFEAESGDVSFAIVLMTPDDSGSALASESTRLRARQNVLYELGYFAGKLGRGKVLVLRK 253 ++ + +V+F ++L + A + +G+ LGR +++ L Sbjct: 344 DQLD-ALRNVAFLLLLPGEEPEAPAA-------------MLAIGFMLAVLGRSRIVCLLS 389 Query: 254 GDIEIPSDLAGVLYTELDEHGGWKRKLLSELAYAGVPFDKDKAL 297 +P L G +DE G W+ L E+ AG+ D ++A+ Sbjct: 390 DQEALPDALKGATRITVDEAGLWRLLLAREMKRAGLDVDLNRAI 433 >UniRef50_C7RC53 Putative uncharacterized protein n=1 Tax=Kangiella koreensis DSM 16069 RepID=C7RC53_KANKD Length = 365 Score = 95.2 bits (235), Expect = 2e-18, Method: Composition-based stats. Identities = 30/159 (18%), Positives = 64/159 (40%), Gaps = 4/159 (2%) Query: 128 FVRDYQLYVENQHDPEPAVFRPVSRKIFIVHGHDNDALQSVARFISRIGLEEIILSERPD 187 F R E++ P V R + +FI HG + +Q + ++ ++ E+ Sbjct: 206 FARRIAENNESEPKPVKPVQR--NSNVFISHGKNKKVVQQLKELLTFGKFNPVVSVEKET 263 Query: 188 GSRTIIEKFEAESGDVSFAIVLMTPDDSGSALASESTRLRARQNVLYELGYFAGKLGRGK 247 S + EK + + S A++ + + + + +NVL E+G + Sbjct: 264 ASIPVPEKVFEDMRECSAAVIHLEAEQE-LLDPEGNKHSKINENVLIEIGAAIALYNK-N 321 Query: 248 VLVLRKGDIEIPSDLAGVLYTELDEHGGWKRKLLSELAY 286 ++L K +++PS+L G+ +E + + L Sbjct: 322 FVLLVKKGVKLPSNLQGLYRSEYEGDALDYEATMKLLKT 360 >UniRef50_B5JSV8 YebB n=4 Tax=Proteobacteria RepID=B5JSV8_9GAMM Length = 90 Score = 92.5 bits (228), Expect = 1e-17, Method: Composition-based stats. Identities = 31/88 (35%), Positives = 46/88 (52%), Gaps = 3/88 (3%) Query: 215 SGSALAS--ESTRLRARQNVLYELGYFAGKLGRGKVLVLRKGDIEIPSDLAGVLYTELDE 272 G + + E+ + RARQNV+ E+G +GRG V +L+KG +E PSD G+LY ++ Sbjct: 1 MGYSKSDGAENVQPRARQNVVLEMGMLISAVGRGNVAILKKGHLEAPSDAQGILYVPFND 60 Query: 273 H-GGWKRKLLSELAYAGVPFDKDKALSA 299 H KL L AG + + A Sbjct: 61 HVKEAVPKLADRLRAAGFVLNPENITKA 88 >UniRef50_C6W705 Nucleotide-binding protein containing TIR-like domain-like protein n=1 Tax=Dyadobacter fermentans DSM 18053 RepID=C6W705_DYAFD Length = 306 Score = 84.8 bits (208), Expect = 3e-15, Method: Composition-based stats. Identities = 30/128 (23%), Positives = 59/128 (46%), Gaps = 3/128 (2%) Query: 150 VSRKIFIVHGHDNDALQSVARFISRIGLEEIILSERP-DGSRTIIEKFEAESGDVSFAIV 208 + ++FI + + + + I +E + +++ E S FAI+ Sbjct: 1 MKPRVFIGSSREGLPKAKLLKGYLSGVADCQIWNEDFFENNKSSFESLSQSSTLFDFAIL 60 Query: 209 LMTPDDSGSALASESTRLRARQNVLYELGYFAGKLGRGKVLVLRKGDIEIPSDLAGVLYT 268 L + DD ++ + AR NVL+E G + G+LGR + +++ + +PSDL G+ + Sbjct: 61 LASADDVVL--KRDNLEISARDNVLFEFGLYVGRLGRNRAFFVKEKGLNLPSDLYGITLS 118 Query: 269 ELDEHGGW 276 E D + Sbjct: 119 EFDFGSNF 126 >UniRef50_A4Z1J6 Putative uncharacterized protein n=2 Tax=Rhizobiales RepID=A4Z1J6_BRASO Length = 67 Score = 82.1 bits (201), Expect = 2e-14, Method: Composition-based stats. Identities = 26/67 (38%), Positives = 37/67 (55%) Query: 233 LYELGYFAGKLGRGKVLVLRKGDIEIPSDLAGVLYTELDEHGGWKRKLLSELAYAGVPFD 292 ++ELG+F GKLG V L K +E PSD G+ Y + WK +L E+ +A + FD Sbjct: 1 MFELGFFIGKLGPAHVAALLKSGVEKPSDFDGIAYISYGQGTSWKTELAREMLHAKISFD 60 Query: 293 KDKALSA 299 L+A Sbjct: 61 TSAVLTA 67 >UniRef50_Q54R22 Putative uncharacterized protein n=1 Tax=Dictyostelium discoideum RepID=Q54R22_DICDI Length = 251 Score = 77.1 bits (188), Expect = 7e-13, Method: Composition-based stats. Identities = 20/114 (17%), Positives = 46/114 (40%), Gaps = 4/114 (3%) Query: 138 NQHDPEPAVFRPVSRKIFIVHGHDNDALQSVARFISRIGLEEIILSERPDGSRTIIEKFE 197 + P K +V+G++ + ++ + + + ++L + +T I+ FE Sbjct: 101 DADGANTTQQTPKKLKALVVNGNNEI-QEKYSKMLEDMNISIVLLESK--NGKTDIKNFE 157 Query: 198 AESGDVSFAIVLMTPDDSGSALASESTRLRARQNVLYELGYFAGKLGRGKVLVL 251 F +V +T D S R N+++E+G G +G+ + + Sbjct: 158 KIIDGCDFCLVFVTY-DLESHDPEYEEHYYPRFNLIFEMGLLYGLMGKNNTIYV 210 >UniRef50_Q212T3 Putative uncharacterized protein n=1 Tax=Rhodopseudomonas palustris BisB18 RepID=Q212T3_RHOPB Length = 253 Score = 75.2 bits (183), Expect = 3e-12, Method: Composition-based stats. Identities = 32/78 (41%), Positives = 50/78 (64%), Gaps = 1/78 (1%) Query: 144 PAVFRPVSRKIFIVHGHDNDALQSVARFISRIGLEEIILSERPDGSRTIIEKFEAESGDV 203 P S+++FIVHGHD++ SV+ F+ IGLE +IL+++ + +TIIEKFE + V Sbjct: 152 PEAQLERSKRVFIVHGHDDNMKLSVSNFLMAIGLEPVILADQVNAGKTIIEKFERNAD-V 210 Query: 204 SFAIVLMTPDDSGSALAS 221 +A+VL++PDD Sbjct: 211 GYAVVLLSPDDYSPQGGD 228 >UniRef50_A0KZC7 Putative uncharacterized protein n=1 Tax=Shewanella sp. ANA-3 RepID=A0KZC7_SHESA Length = 343 Score = 72.9 bits (177), Expect = 1e-11, Method: Composition-based stats. Identities = 34/148 (22%), Positives = 58/148 (39%), Gaps = 27/148 (18%) Query: 162 NDALQSVARFIS-----RIGLEEIILSERPDGSRTIIEKFEAESGDVSFAIVLMTPDDSG 216 A++ + + + R+ + + PD + TI+ K E + D Sbjct: 25 ERAIKQLNQDLKIEDALRLDHDTKDVQGSPDIASTILSKIEKSDIFIG---------DIT 75 Query: 217 SALASESTRLRARQNVLYELGYFAGKLGRGKVLVLRKGDI-----EIPSDLAG----VLY 267 SE+ + NVL ELGY +LG G+V+ + +P DLA ++Y Sbjct: 76 FITKSENEKYCPNPNVLIELGYALSRLGDGRVINIMNSSFGSPDKNLPFDLAHKRWPIVY 135 Query: 268 TELDEHGGWKRKLLSEL----AYAGVPF 291 D++ K + +EL A PF Sbjct: 136 NLSDDNYADKATVRNELIASFKSALYPF 163 >UniRef50_C3DUD7 Putative uncharacterized protein n=1 Tax=Bacillus thuringiensis serovar sotto str. T04001 RepID=C3DUD7_BACTS Length = 136 Score = 52.5 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 27/148 (18%), Positives = 51/148 (34%), Gaps = 13/148 (8%) Query: 40 LQSVNAHLTRNVELDTFLARSEDTESSMAGSAVLQWPDEPADILGLKLLLIEKMADDNNF 99 + S ++ + + ++++ + L I I + Sbjct: 1 MSSFLNLQKEELQFNGYFLKAQNIVRIQVKTTELPIKAIVEIIDAQTPETIAWFVTKEDA 60 Query: 100 SFNFCHTFFYDRNIIESIRKFTSSLVAPFVRDYQLYVENQHDPEPAVFRPVSRKIFIVHG 159 + T II+ + + + P+ ++K+FIVHG Sbjct: 61 FVDDECTQDVTTEIIKEAKVRMREPL-------------KLSVSPSSTEIDNKKVFIVHG 107 Query: 160 HDNDALQSVARFISRIGLEEIILSERPD 187 HD SVARF+ R+ L+ IIL E+ Sbjct: 108 HDESVKISVARFLERLDLKPIILHEQAS 135 >UniRef50_B4S6V8 Putative uncharacterized protein n=1 Tax=Prosthecochloris aestuarii DSM 271 RepID=B4S6V8_PROA2 Length = 304 Score = 45.9 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 34/180 (18%), Positives = 58/180 (32%), Gaps = 37/180 (20%) Query: 121 TSSLVAPFVRDYQLYVENQHDPEPAVF--------------RPVSRKIFIVHG--HDNDA 164 + + D QL ++Q + +SR +F++ ++ Sbjct: 126 ATKITGLAKDDLQLLRKSQSVLVTSEAIQVYAEQVISLAEKAALSRDVFVIMSFEEEDHL 185 Query: 165 LQSVARFI---SRIGLEEIILSERPDG-SRTIIEKFEAESGDVSFAIVLMTPDDSGSALA 220 +A G E + RP + II+ F I +T + Sbjct: 186 KDYMAAVKAVCKGAGFEAVRTDTRPAPNAHQIIDSIHEHIQACGFVIADLTNE------- 238 Query: 221 SESTRLRARQNVLYELGYFAGKLGRGKVLVLRKGDIEIPSDLAGVLYTELDEHGGWKRKL 280 R NV YE+GY G K+++ K D ++ DL G E K +L Sbjct: 239 --------RPNVYYEIGYAMGL--NKKLILTSKKDGKVHFDLQGYNRIEWSGSENLKEQL 288 >UniRef50_Q2F9V3 Putative uncharacterized protein n=1 Tax=Vibrio sp. DAT722 RepID=Q2F9V3_9VIBR Length = 318 Score = 45.5 bits (106), Expect = 0.002, Method: Composition-based stats. Identities = 29/111 (26%), Positives = 47/111 (42%), Gaps = 21/111 (18%) Query: 162 NDALQSVARFISRIGLEEII------LSERPDGSRTIIEKFEAESGDVSFAIVLMTPDDS 215 N A+ + LE +I ++ PD S++I K + S V ++ D Sbjct: 26 NSAVDDLKSD-KDFSLEPVIDRDTLGVAGSPDISQSIFSKIDNASVFVCDVSIINQGQD- 83 Query: 216 GSALASESTRLRARQNVLYELGYFAGKLGRGKVLVLRKGDI----EIPSDL 262 +L NVL ELGY GKLG +++++ + E+P DL Sbjct: 84 ---------KLSPNPNVLIELGYAIGKLGWERIIMIMNTEYGSPTELPFDL 125 >UniRef50_D2ERD7 Putative uncharacterized protein n=1 Tax=Streptococcus sp. M143 RepID=D2ERD7_9STRE Length = 385 Score = 44.8 bits (104), Expect = 0.004, Method: Composition-based stats. Identities = 24/112 (21%), Positives = 39/112 (34%), Gaps = 14/112 (12%) Query: 189 SRTIIEKFEAESGDVSFAIVLMTPDDSGSALASESTRLRARQNVLYELGYFAGKLGRGKV 248 S I++ + I D +S + + NVL+ELGY LG +V Sbjct: 54 SPDIVDSILTKIDKCGLFIA-----DISIINSSLNGKRTPNPNVLFELGYAVKCLGWDRV 108 Query: 249 LVLRKGDI----EIPSDLAGVLYTELDEHG--GWKRKLLSELAYAGVPFDKD 294 + + D E+P DL + ++KL DK+ Sbjct: 109 ICVFNSDFGDVSELPFDLRNRRILTYETSNISETRKKLADIFKQI---IDKN 157 >UniRef50_Q3M574 Putative uncharacterized protein n=1 Tax=Anabaena variabilis ATCC 29413 RepID=Q3M574_ANAVT Length = 484 Score = 43.2 bits (100), Expect = 0.010, Method: Composition-based stats. Identities = 30/127 (23%), Positives = 47/127 (37%), Gaps = 19/127 (14%) Query: 175 IGLEEIILSERPDGSRTIIEKFEAESGDVSFAIVLMTPDDSGSALASESTRLRARQNVLY 234 I + + PD + TI +K E V D + S+RL NVL Sbjct: 45 IDRDTKDVPGSPDIAHTIFDKIEQAQVFV---------CDVSIINQNSSSRLTPNPNVLL 95 Query: 235 ELGYFAGKLGRGKVLVLRKGDI----EIPSDLAGVLYTEL------DEHGGWKRKLLSEL 284 ELGY LG ++++ E+P DL ++ +R+L S+L Sbjct: 96 ELGYAINALGWNNIIMVLNSAFAKPEELPFDLRMRRVITYFMPEESEDRSTERRQLQSKL 155 Query: 285 AYAGVPF 291 +A Sbjct: 156 EFALRNI 162 >UniRef50_Q54KI8 Putative uncharacterized protein n=1 Tax=Dictyostelium discoideum RepID=Q54KI8_DICDI Length = 132 Score = 42.5 bits (98), Expect = 0.016, Method: Composition-based stats. Identities = 18/93 (19%), Positives = 41/93 (44%), Gaps = 6/93 (6%) Query: 171 FISRIGLEEIILSERPDGSRT-IIEKFEAESGDVSFAIVLMTPDDSGSALASE-----ST 224 + ++ ++ II+ + + T I+ E E F I+L+T ++ + Sbjct: 1 MLIKLKIDMIIVPQNDNSEFTKSIDTIEKEVKKCDFCIILITYENRFFKKTNNFFEAYQE 60 Query: 225 RLRARQNVLYELGYFAGKLGRGKVLVLRKGDIE 257 ++ ++L E+GY G+ K +++ IE Sbjct: 61 MVQPNLSLLLEMGYLISHFGKQKTIIVEFSPIE 93 >UniRef50_B9JNX7 Putative uncharacterized protein n=1 Tax=Agrobacterium radiobacter K84 RepID=B9JNX7_AGRRK Length = 576 Score = 42.5 bits (98), Expect = 0.020, Method: Composition-based stats. Identities = 25/133 (18%), Positives = 42/133 (31%), Gaps = 21/133 (15%) Query: 163 DALQSVARFISRIGLEEIILS--ERPDGSRTIIEKFEAESGDVSFAIVLMTPDDSGSALA 220 A V + +++ L P + TI +K + A+ L D Sbjct: 34 QADAEVDLADRELAIDKDTLHVPGSPAIAETIYDKIDR------AAVFL---SDLTYVAL 84 Query: 221 SESTRLRARQNVLYELGYFAGKLGRGKVLVLR------KGDIEIPSDLAG----VLYTEL 270 + NVL E G+ L +V+ + E+P DL +LY Sbjct: 85 RPNGGGIPNPNVLIEHGWALKSLSSRRVISVMNTALGDPEQHELPFDLRHVRRPILYACS 144 Query: 271 DEHGGWKRKLLSE 283 + +K E Sbjct: 145 PDAKQEDKKKARE 157 >UniRef50_C5SF52 Putative uncharacterized protein n=1 Tax=Asticcacaulis excentricus CB 48 RepID=C5SF52_9CAUL Length = 309 Score = 42.1 bits (97), Expect = 0.022, Method: Composition-based stats. Identities = 19/99 (19%), Positives = 33/99 (33%), Gaps = 16/99 (16%) Query: 195 KFEAESGDVSFAIVLMTPDDSGSALASESTRLRARQNVLYELGYFAGKLGRGKVLVLRKG 254 + FA+ + NV E+GY LG+ VL+L+ Sbjct: 222 NIKTYMHSCDFAVAIW----------DRIETDEFNPNVSLEVGYMMA-LGKD-VLLLKDQ 269 Query: 255 DIE-IPSDLAGVLYTELD---EHGGWKRKLLSELAYAGV 289 ++ +P+D+ G LY D ++ L Sbjct: 270 TLKALPTDIIGRLYKPFDTRSPGTTAPEHIIKWLRDKNY 308 >UniRef50_C5V3F2 Putative uncharacterized protein n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V3F2_9PROT Length = 258 Score = 42.1 bits (97), Expect = 0.025, Method: Composition-based stats. Identities = 24/136 (17%), Positives = 49/136 (36%), Gaps = 10/136 (7%) Query: 154 IFIVHGH-DNDALQSVARFISRIGLEEIILSERPDGSRTIIEKFEAESGDVSFAIVLMTP 212 IF+ H H D + +A + + G I + ++IEK +V + +++ Sbjct: 4 IFLSHSHADKPFARKLAADLRKAGHAVWIDEAEINIGDSLIEKIRDGLDEVDYVAAILSS 63 Query: 213 DDSGSALASESTRLRARQNVLYELGYFAGKLGRGKVLVLRKGDIEIPSDLAGVLYTELDE 272 S + + + + + + R VL L +E+P L G Y + + Sbjct: 64 ASIASPWITRELDIASNREIEEK---------RVVVLPLLLEQVELPGFLKGKFYGDFTD 114 Query: 273 HGGWKRKLLSELAYAG 288 + L + G Sbjct: 115 SSRYDEMLALLVRKLG 130 >UniRef50_D1LX78 Neuralized PATS1 n=1 Tax=Saccoglossus kowalevskii RepID=D1LX78_SACKO Length = 1227 Score = 40.5 bits (93), Expect = 0.074, Method: Composition-based stats. Identities = 41/228 (17%), Positives = 78/228 (34%), Gaps = 17/228 (7%) Query: 3 IDIFQSLKNCVF--DLQRADVQNYQQPLKQLARLLNSE---NLQSVNAHLTRNVELDTFL 57 +++ Q L N V D +R ++++ + + + + Q N L EL ++ Sbjct: 861 LNLDQCLNNKVVLCDHRRIKTNSFKKWFPSKSTSVVAPRPLSRQQSNLRLLEE-ELPDWM 919 Query: 58 ARSEDTESSMAGSAVLQWPDEPADILGLKLLLIEKMADDNNFSFNFCHTFFYDRNIIESI 117 ++ AGS W A+ LG K I K D+ N + + Y Sbjct: 920 KKAAKLL--NAGSEGSDW-LALAEKLGYKKAKIRKFNDEVNPALAMLTDWIYSSGNTTLS 976 Query: 118 RKFTSSLVAPFVRDYQLYVENQHDPEPAVFRPVSRKIFIV--HGHDNDALQSVARFISRI 175 + S + R+ + Q + P IFI G + + ++ + Sbjct: 977 IEMMLSYLEQMHRE-DVVDAIQQGQDSHTSAP----IFISYNWGIQEEVK-QLRDYLEKA 1030 Query: 176 GLEEIILSERPDGSRTIIEKFEAESGDVSFAIVLMTPDDSGSALASES 223 G + + G T+ E+ + + I MTP S + Sbjct: 1031 GFPCWMDIGQMGGGDTLYERIDDGMRNCKVVIACMTPKYIVSHNCNRE 1078 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.310 0.125 0.288 Lambda K H 0.267 0.0379 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 1,306,834,961 Number of Sequences: 3077464 Number of extensions: 45791740 Number of successful extensions: 136175 Number of sequences better than 1.0e-01: 103 Number of HSP's better than 0.1 without gapping: 238 Number of HSP's successfully gapped in prelim test: 43 Number of HSP's that attempted gapping in prelim test: 135534 Number of HSP's gapped (non-prelim): 288 length of query: 299 length of database: 1,040,396,356 effective HSP length: 128 effective length of query: 171 effective length of database: 646,480,964 effective search space: 110548244844 effective search space used: 110548244844 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.4 bits) S2: 92 (40.2 bits)