71 c1atiA_ Probab=98.82   E-value=1.1e-07  Score=60.81  Aligned_columns=118  Identities=20%

Q ss_pred             HHHHHHHHHHHHHHH--HHCCEEEECCCEEEE---------------------CCCCCCCCEEEEE---ECCCCCCCCCC
Q ss_conf             999999999999999--729718942872540---------------------4677765437863---06776611115
Q batch____       138 LKTRAKITSLVRRFM--DDHGFLDIETPMLTK---------------------ATPEGARDYLVPS---RVHKGKFYALP  191 (590)
Q Consensus       138 ~r~Rs~i~~~~R~fl--~~~gFiEV~TPiL~~---------------------~~~eGa~~~~~~~---~~~~~~~y~L~  191 (590)
                      ++++.+|...+|+.+  .+.||.||.||+|..                     +...+-..+|...   ....+.-++|+
T Consensus        39 ~~v~~~i~~~~r~~~v~~~~g~~ev~~P~l~~~elw~~Sg~~~~~~~~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr  118 (437)
T c1atiA_          39 VELKNNLKQAWWRRNVYERDDMEGLDASVLTHRLVLHYSGHEATFADPMVDNWTPPRYFNMMFQDLRGPRGGRGLLAYLR  118 (437)
T ss_dssp             HHHHHHHHHHHHHHHTTSCSSEEEECCCSEEETTHHHHTSHHHHCEEEECCCCCCCEEEECBEEEECSSCCCGGGEEEEC
T ss_pred             HHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHCCCCCCCCHHHHHCCCCCCCCCHHHHHCCCCCCCCCCEEEEC
T ss_conf             99999999999998642325976643477668889976485100284442013453221002321035555544312323


Q ss_pred             CCHH-----HHHHHHHHCCCC---CEEEEEEEEECCCCCCC----CCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHH
Q ss_conf             8828-----999999975997---40899843416888886----477211444431079989999999999999999
Q batch____       192 QSPQ-----LFKQLLMMSGFD---RYYQIVKCFRDEDLRAD----RQPEFTQIDVETSFMTAPQVREVMEALVRHLWL  257 (590)
Q Consensus       192 qSPq-----l~kq~li~~g~~---rvfei~~~FR~E~~~t~----r~pEFt~Le~e~a~~~~~~im~~~E~li~~i~~  257 (590)
                      -...     .+++.+..+.-+   |+|||+++||+|.+ ++    |.-||+|.|+| .|.+.+.......+++....+
T Consensus       119 p~~~~~~~~~~~~~~~~~~~~LP~~lyqig~~fR~E~~-~r~Gl~R~REF~q~D~~-~F~~~~~~~~~~~~~~~~~~~  194 (437)
T c1atiA_         119 PETAQGIFVNFKNVLDATSRKLGFGIAQIGKAFRNEIT-PRNFIFRVREFEQMEIE-YFVRPGEDEYWHRYWVEERLK  194 (437)
T ss_dssp             SSSHHHHHHTHHHHHHHHTCCSSEEEEEEEEEEBCCSS-CCTGGGSCSEEEEEEEE-EEECGGGHHHHHHHHHHHHHH
T ss_pred             CCCCHHHHHHHHHHHHHCCCCCCEEEEEEEEEECCCCC-CCCCCCCHHHEEEECEE-EECCHHHHHHHHHHHHHHHHH
T ss_conf             77888999998989874126697789888844317876-66765220230010111-011888999999999999999