BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (151 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_P0ABS3 DnaK suppressor protein n=247 Tax=Proteobacteria... 311 5e-84 UniRef50_A7K6F3 DnaK suppressor protein (Fragment) n=48 Tax=Vibr... 249 2e-65 UniRef50_Q89AR3 DnaK suppressor protein homolog n=7 Tax=Gammapro... 234 8e-61 UniRef50_P43758 DnaK suppressor protein homolog n=104 Tax=Proteo... 227 7e-59 UniRef50_A8PLZ9 Suppressor protein DksA n=3 Tax=Gammaproteobacte... 179 3e-44 UniRef50_Q5UF45 Predicted DskA family protein n=4 Tax=Bacteria R... 163 1e-39 UniRef50_Q31G85 Transcriptional regulators, TraR/DksA family n=1... 149 3e-35 UniRef50_Q6SHS2 DnaK suppressor protein n=1 Tax=uncultured marin... 148 5e-35 UniRef50_A5EW31 RNA polymerase-binding protein DksA n=2 Tax=Gamm... 136 2e-31 UniRef50_A0LCU1 Transcriptional regulator, TraR/DksA family n=2 ... 135 4e-31 UniRef50_A7C5U4 Zn-finger, prokaryotic DksA/TraR C4 type n=1 Tax... 135 4e-31 UniRef50_Q21SV6 Transcriptional regulators, TraR/DksA family n=5... 127 1e-28 UniRef50_Q12EM6 Transcriptional regulators, TraR/DksA family n=6... 122 5e-27 UniRef50_Q0A892 Transcriptional regulators, TraR/DksA family n=1... 116 2e-25 UniRef50_A1AL35 Transcriptional regulator, TraR/DksA family n=8 ... 114 1e-24 UniRef50_B8H0C0 DnaK suppressor protein homolog n=110 Tax=Bacter... 114 1e-24 UniRef50_A3RXC3 DnaK suppressor protein n=1 Tax=Ralstonia solana... 112 5e-24 UniRef50_B5EG80 Transcriptional regulator, TraR/DksA family n=4 ... 111 8e-24 UniRef50_A7HW84 Transcriptional regulator, TraR/DksA family n=68... 110 1e-23 UniRef50_Q3A0W2 DnaK suppressor protein n=2 Tax=Proteobacteria R... 109 3e-23 UniRef50_A6T2Z9 DnaK suppressor protein n=5 Tax=Betaproteobacter... 108 4e-23 UniRef50_B4SQA3 Transcriptional regulator, TraR/DksA family n=35... 106 2e-22 UniRef50_Q1GI88 Transcriptional regulators TraR/DksA family n=26... 105 3e-22 UniRef50_Q2LSS1 DnaK suppressor protein n=13 Tax=Deltaproteobact... 105 3e-22 UniRef50_Q0EXX5 Transcriptional regulators, TraR/DksA family pro... 97 2e-19 UniRef50_B8J371 Transcriptional regulator, TraR/DksA family n=2 ... 95 5e-19 UniRef50_Q1MS84 Molecular chaperone dnaK n=4 Tax=Deltaproteobact... 93 3e-18 UniRef50_UPI0001AEC064 DnaK suppressor protein n=1 Tax=Alteromon... 92 6e-18 UniRef50_B5YK78 RNA polymerase-binding protein DksA n=1 Tax=Ther... 90 3e-17 UniRef50_B2V8G8 Transcriptional regulator, TraR/DksA family n=4 ... 88 9e-17 UniRef50_D2L3E3 Transcriptional regulator, TraR/DksA family n=2 ... 86 4e-16 UniRef50_A7H9X1 Transcriptional regulator, TraR/DksA family n=7 ... 86 5e-16 UniRef50_B4U7Z4 Transcriptional regulator, TraR/DksA family n=3 ... 85 6e-16 UniRef50_Q2SLB9 DnaK suppressor protein n=7 Tax=Gammaproteobacte... 84 1e-15 UniRef50_A8GD52 Transcriptional regulator, TraR/DksA family n=9 ... 82 5e-15 UniRef50_Q1JWV8 Transcriptional regulators, TraR/DksA family n=1... 80 2e-14 UniRef50_C6HWS3 Transcriptional regulator, TraR/DksA family n=3 ... 80 3e-14 UniRef50_B1J6V4 Transcriptional regulator, TraR/DksA family n=4 ... 79 3e-14 UniRef50_A4SHJ5 DnaK suppressor protein n=3 Tax=Gammaproteobacte... 76 4e-13 UniRef50_B8J655 Transcriptional regulator, TraR/DksA family n=3 ... 74 2e-12 UniRef50_A5W685 Transcriptional regulator, TraR/DksA family n=11... 73 2e-12 UniRef50_Q2GI38 DnaK suppressor protein n=9 Tax=Anaplasmataceae ... 71 9e-12 UniRef50_D0HX41 DnaK suppressor protein n=1 Tax=Vibrio cholerae ... 71 9e-12 UniRef50_Q0VNX0 DnaK suppressor protein homolog, DksA/TraR famil... 71 1e-11 UniRef50_C8PIH5 DnaK suppressor protein n=1 Tax=Campylobacter gr... 71 1e-11 UniRef50_D0LZD2 Transcriptional regulator, TraR/DksA family n=3 ... 69 5e-11 UniRef50_D2L9K5 Transcriptional regulator, TraR/DksA family n=2 ... 67 2e-10 UniRef50_C8X580 Transcriptional regulator, TraR/DksA family n=1 ... 65 8e-10 UniRef50_D0LUD2 Transcriptional regulator, TraR/DksA family n=1 ... 63 2e-09 UniRef50_Q2YD37 Transcriptional regulators, TraR/DksA family n=2... 63 3e-09 UniRef50_B6BSH6 DnaK suppressor protein n=6 Tax=Bacteria RepID=B... 62 6e-09 UniRef50_A4XDN2 Zinc finger, DksA/TraR C4-type n=5 Tax=Actinomyc... 61 9e-09 UniRef50_C6C0K2 Transcriptional regulator, TraR/DksA family n=1 ... 61 1e-08 UniRef50_D1UB56 Transcriptional regulator, TraR/DksA family n=1 ... 60 3e-08 UniRef50_C0QFB9 DksA1 n=1 Tax=Desulfobacterium autotrophicum HRM... 59 4e-08 UniRef50_B8DQJ2 Transcriptional regulator, TraR/DksA family n=1 ... 59 5e-08 UniRef50_C7QCE7 Transcriptional regulator, TraR/DksA family n=1 ... 59 6e-08 UniRef50_Q30RD2 Transcriptional regulators, TraR/DksA family n=3... 58 9e-08 UniRef50_A0LMB8 Transcriptional regulator, TraR/DksA family n=1 ... 58 1e-07 UniRef50_Q2BN62 DnaK suppressor protein, putative n=1 Tax=Neptun... 58 1e-07 UniRef50_A1SL71 Zinc finger, DksA/TraR C4-type n=4 Tax=Actinomyc... 57 1e-07 UniRef50_Q30V43 Transcriptional regulators, TraR/DksA family n=1... 57 2e-07 UniRef50_Q021M5 Transcriptional regulator, TraR/DksA family n=1 ... 56 3e-07 UniRef50_C3XG00 DnaK suppressor protein n=1 Tax=Helicobacter bil... 55 5e-07 UniRef50_A0LGY5 Transcriptional regulator, TraR/DksA family n=1 ... 55 5e-07 UniRef50_Q2RK56 Transcriptional regulators, TraR/DksA family n=1... 55 6e-07 UniRef50_Q7VGT4 DnaK suppressor protein DskA n=2 Tax=Helicobacte... 55 7e-07 UniRef50_C5EYJ0 DnaK suppressor protein n=4 Tax=Helicobacter Rep... 55 7e-07 UniRef50_Q9S2X6 Putative DNA-binding protein n=2 Tax=Streptomyce... 55 7e-07 UniRef50_B5GH83 DNA-binding protein n=1 Tax=Streptomyces sp. SPB... 55 8e-07 UniRef50_C7LTL7 Transcriptional regulator, TraR/DksA family n=1 ... 54 1e-06 UniRef50_Q2GEN7 DnaK suppressor protein n=2 Tax=Neorickettsia Re... 54 1e-06 UniRef50_A4XKS6 Transcriptional regulator, TraR/DksA family n=2 ... 54 2e-06 UniRef50_Q01U65 Transcriptional regulator, TraR/DksA family n=1 ... 54 2e-06 UniRef50_A1HSA8 Transcriptional regulator, TraR/DksA family n=1 ... 54 2e-06 UniRef50_A1VFA5 Transcriptional regulator, TraR/DksA family n=3 ... 53 2e-06 UniRef50_Q6MGP9 DksA protein n=1 Tax=Bdellovibrio bacteriovorus ... 53 3e-06 UniRef50_C7LT72 Transcriptional regulator, TraR/DksA family n=1 ... 52 4e-06 UniRef50_C1DXT7 Transcriptional regulator, TraR/DksA family n=5 ... 52 4e-06 UniRef50_A4BMT6 Putative uncharacterized protein n=1 Tax=Nitroco... 52 4e-06 UniRef50_Q2BI57 Zn-finger, prokaryotic DksA/TraR C4 type n=1 Tax... 52 5e-06 UniRef50_B8DLC7 Transcriptional regulator, TraR/DksA family n=1 ... 52 5e-06 UniRef50_A4V7S0 Putative transcriptional regulator DnaK suppress... 52 5e-06 UniRef50_D1CBT8 Transcriptional regulator, TraR/DksA family n=1 ... 52 6e-06 UniRef50_D0LJW3 Transcriptional regulator, TraR/DksA family n=1 ... 52 6e-06 UniRef50_A3DD29 Transcriptional regulators, TraR/DksA family n=5... 52 7e-06 UniRef50_A1VXK8 DnaK suppressor protein, putative n=15 Tax=Campy... 52 8e-06 UniRef50_B2V854 Transcriptional regulator, TraR/DksA family n=4 ... 52 8e-06 UniRef50_C0GJQ4 Transcriptional regulator, TraR/DksA family n=1 ... 51 9e-06 UniRef50_A0RMM0 Transcriptional regulators, TraR/DksA family n=9... 51 1e-05 UniRef50_B8FT18 Transcriptional regulator, TraR/DksA family n=2 ... 51 1e-05 UniRef50_Q221D7 Transcriptional regulators, TraR/DksA family n=3... 51 1e-05 UniRef50_A0LTP3 Transcriptional regulators, TraR/DksA family n=7... 51 1e-05 UniRef50_Q021L0 Transcriptional regulator, TraR/DksA family n=1 ... 50 1e-05 UniRef50_A8EWK7 DnaK suppressor protein DksA n=1 Tax=Arcobacter ... 50 2e-05 UniRef50_B2A2J0 Transcriptional regulator, TraR/DksA family n=1 ... 50 2e-05 UniRef50_D1C120 Transcriptional regulator, TraR/DksA family n=1 ... 50 2e-05 UniRef50_C0R4V6 DnaK suppressor protein, putative n=6 Tax=Wolbac... 50 2e-05 UniRef50_A6WCW5 Transcriptional regulator, TraR/DksA family n=10... 50 3e-05 UniRef50_A9G9K0 Putative dnaK suppressor protein n=1 Tax=Sorangi... 49 3e-05 UniRef50_Q1IJ15 Transcriptional regulators, TraR/DksA family n=1... 49 4e-05 UniRef50_C0AYB0 Putative uncharacterized protein n=1 Tax=Proteus... 49 4e-05 UniRef50_A4X6U9 Zinc finger, DksA/TraR C4-type n=4 Tax=Micromono... 49 4e-05 UniRef50_B7S3A6 Putative uncharacterized protein n=1 Tax=marine ... 49 4e-05 UniRef50_C8W4E4 Transcriptional regulator, TraR/DksA family n=1 ... 49 5e-05 UniRef50_Q2GBE3 Transcriptional regulator, TraR/DksA family n=3 ... 49 7e-05 UniRef50_A9B2U1 Transcriptional regulator, TraR/DksA family n=1 ... 49 7e-05 UniRef50_C6Q1P6 Transcriptional regulator, TraR/DksA family n=13... 48 8e-05 UniRef50_B1H0G2 Putative dnaK suppressor n=1 Tax=uncultured Term... 48 8e-05 UniRef50_C9R7U4 Transcriptional regulator, TraR/DksA family n=1 ... 48 9e-05 UniRef50_Q48NH0 RNA polymerase-binding protein DksA n=2 Tax=Pseu... 48 9e-05 UniRef50_A1K6D2 Conserved hypothetical DnaK suppressor protein n... 48 1e-04 UniRef50_C5CLF2 Transcriptional regulator, TraR/DksA family n=1 ... 48 1e-04 UniRef50_B5YGE3 DnaK suppressor protein n=1 Tax=Thermodesulfovib... 48 1e-04 UniRef50_C7R8Q8 Transcriptional regulator, TraR/DksA family n=1 ... 48 1e-04 UniRef50_A5UPY9 Transcriptional regulator, TraR/DksA family n=2 ... 48 1e-04 UniRef50_C1I8K1 Putative uncharacterized protein n=1 Tax=Clostri... 48 1e-04 UniRef50_D1X2L9 Transcriptional regulator, TraR/DksA family n=5 ... 47 1e-04 UniRef50_C8WW56 Transcriptional regulator, TraR/DksA family n=2 ... 47 1e-04 UniRef50_Q72G22 C4-type zinc finger protein, DksA/TraR family n=... 47 2e-04 UniRef50_UPI0001B515E7 hypothetical protein SvirD4_35899 n=1 Tax... 47 2e-04 UniRef50_B8CWL7 Transcriptional regulator, TraR/DksA family n=1 ... 47 2e-04 UniRef50_Q67Q17 Putative uncharacterized protein n=1 Tax=Symbiob... 47 2e-04 UniRef50_Q1Q506 Similar to DnaK suppressor protein n=1 Tax=Candi... 47 2e-04 UniRef50_A2SLK5 Putative DNA-binding protein n=1 Tax=Methylibium... 47 2e-04 UniRef50_A3ZQT2 Probable DnaK suppressor protein n=1 Tax=Blastop... 47 2e-04 UniRef50_B0TGP7 Putative uncharacterized protein n=1 Tax=Helioba... 47 2e-04 UniRef50_B3DUR8 DnaK suppressor protein n=1 Tax=Methylacidiphilu... 47 2e-04 UniRef50_A6DCX4 Transcriptional regulator, TraR/DksA family prot... 47 3e-04 UniRef50_Q97H97 General stress protein, DnaK suppressor DskA, YT... 46 3e-04 UniRef50_B3EAN1 Transcriptional regulator, TraR/DksA family n=8 ... 46 3e-04 UniRef50_C6I0P9 Transcriptional regulator, TraR/DksA family n=3 ... 46 3e-04 UniRef50_C1F3S7 Putative RNA polymerase-binding protein DksA n=1... 46 3e-04 UniRef50_Q1D0G7 C4-type zinc finger domain protein, DksA/TraR fa... 46 3e-04 UniRef50_Q7UEL7 Probable dnaK (DksA-like) supressor protein n=1 ... 46 4e-04 UniRef50_B1I4J4 Transcriptional regulator, TraR/DksA family n=1 ... 46 4e-04 UniRef50_A0RK79 DnaK suppressor protein n=74 Tax=Bacillus RepID=... 46 4e-04 UniRef50_D1BG79 DnaK suppressor protein n=1 Tax=Sanguibacter ked... 45 5e-04 UniRef50_Q894D3 DnaK suppressor protein n=1 Tax=Clostridium teta... 45 6e-04 UniRef50_Q7MQQ3 Putative uncharacterized protein n=1 Tax=Wolinel... 45 7e-04 UniRef50_P42408 Uncharacterized protein yteA n=2 Tax=Bacillus su... 45 7e-04 UniRef50_C0ZG84 Putative uncharacterized protein yteA n=1 Tax=Br... 45 7e-04 UniRef50_C9RQK2 Transcriptional regulator, TraR/DksA family n=1 ... 45 7e-04 UniRef50_Q2IQL4 Transcriptional regulator, TraR/DksA family n=3 ... 45 8e-04 UniRef50_Q01TC0 Transcriptional regulator, TraR/DksA family n=1 ... 45 8e-04 UniRef50_A3JJC9 Putative uncharacterized protein n=1 Tax=Marinob... 45 8e-04 UniRef50_A5D3H2 Putative uncharacterized protein n=1 Tax=Pelotom... 45 8e-04 UniRef50_D1N407 Transcriptional regulator, TraR/DksA family n=1 ... 45 8e-04 UniRef50_D2MJ83 Transcriptional regulator, TraR/DksA family n=1 ... 45 8e-04 UniRef50_A6TRY0 Transcriptional regulator, TraR/DksA family n=1 ... 45 8e-04 UniRef50_A8LJD1 Transcriptional regulator n=1 Tax=Dinoroseobacte... 45 9e-04 UniRef50_C6PE95 Transcriptional regulator, TraR/DksA family n=1 ... 45 0.001 UniRef50_Q12HC6 Transcriptional regulators, TraR/DksA family n=1... 45 0.001 UniRef50_Q2B4E3 Putative uncharacterized protein n=4 Tax=Bacillu... 45 0.001 UniRef50_D2LWG8 Transcriptional regulator, TraR/DksA family n=1 ... 44 0.001 UniRef50_C3KFN9 Putative uncharacterized protein n=8 Tax=Bacteri... 44 0.001 UniRef50_Q8ENZ4 Putative uncharacterized protein OB2328 n=1 Tax=... 44 0.001 UniRef50_B1KFH6 Transcriptional regulator, TraR/DksA family n=3 ... 44 0.001 UniRef50_Q1CWM4 Conserved domain protein n=1 Tax=Myxococcus xant... 44 0.001 UniRef50_Q253H0 DnaK suppressor n=16 Tax=Chlamydiales RepID=Q253... 44 0.001 UniRef50_D0CY54 Transcriptional regulator, TraR/DksA family n=1 ... 44 0.002 UniRef50_B2KE71 Transcriptional regulator, TraR/DksA family n=1 ... 44 0.002 UniRef50_A8MH72 Transcriptional regulator, TraR/DksA family n=1 ... 44 0.002 UniRef50_B8GPY8 Transcriptional regulator, TraR/DksA family n=1 ... 44 0.002 UniRef50_A6Q9W6 DnaK suppressor protein DksA n=1 Tax=Sulfurovum ... 44 0.002 UniRef50_UPI00016C4B65 DnaK suppressor protein DksA n=1 Tax=Gemm... 44 0.002 UniRef50_D1RI55 DnaK suppressor protein n=1 Tax=Legionella longb... 43 0.003 UniRef50_A6FZV7 Transcriptional regulator, TraR/DksA family prot... 43 0.003 UniRef50_Q1NSE5 Zn-finger, prokaryotic DksA/TraR C4 type n=2 Tax... 43 0.003 UniRef50_A8LRU0 Putative uncharacterized protein n=3 Tax=Rhodoba... 43 0.003 UniRef50_D2R7B0 Transcriptional regulator, TraR/DksA family n=2 ... 43 0.003 UniRef50_A6C001 Probable DnaK suppressor protein n=1 Tax=Plancto... 43 0.003 UniRef50_Q3A5P4 DnaK suppressor protein n=1 Tax=Pelobacter carbi... 43 0.003 UniRef50_A4A689 DnaK suppressor protein n=2 Tax=unclassified Gam... 43 0.003 UniRef50_A0LA91 Transcriptional regulator, TraR/DksA family n=5 ... 43 0.004 UniRef50_Q39WX5 Transcriptional regulators, TraR/DksA family n=4... 43 0.004 UniRef50_D1YA14 C4-type zinc finger protein, DksA/TraR family n=... 43 0.004 UniRef50_Q2SPR7 DnaK suppressor protein n=1 Tax=Hahella chejuens... 43 0.004 UniRef50_Q7UR73 Probable DnaK suppressor protein n=1 Tax=Rhodopi... 42 0.004 UniRef50_A5FM28 Transcriptional regulator, TraR/DksA family n=50... 42 0.004 UniRef50_A6BB80 DnaK suppressor protein n=1 Tax=Vibrio parahaemo... 42 0.004 UniRef50_B0K2T3 Transcriptional regulator, TraR/DksA family n=10... 42 0.004 UniRef50_D2R5D7 Transcriptional regulator, TraR/DksA family n=1 ... 42 0.004 UniRef50_C8X5B5 Transcriptional regulator, TraR/DksA family n=1 ... 42 0.005 UniRef50_A4F8B9 Possible suppressor protein DnaK n=6 Tax=Actinom... 42 0.005 UniRef50_A4J571 Transcriptional regulator, TraR/DksA family n=1 ... 42 0.005 UniRef50_D2S7M9 Transcriptional regulator, TraR/DksA family n=1 ... 42 0.005 UniRef50_A0LSA0 Transcriptional regulators, TraR/DksA family n=1... 42 0.006 UniRef50_A0AZX7 Transcriptional regulators, TraR/DksA family n=3... 42 0.006 UniRef50_B9L783 Transcriptional regulator, TraR/DksA family n=1 ... 42 0.006 UniRef50_B0VG86 Putative uncharacterized protein n=1 Tax=Candida... 42 0.007 UniRef50_B6R7R7 Transcriptional regulator, TraR/DksA family n=1 ... 42 0.008 UniRef50_C5C3L5 Transcriptional regulator, TraR/DksA family n=1 ... 42 0.009 UniRef50_C4KZG3 Transcriptional regulator, TraR/DksA family n=2 ... 42 0.009 UniRef50_C6J3C7 DnaK suppressor protein n=2 Tax=Bacillales RepID... 41 0.009 UniRef50_A8V318 Putative uncharacterized protein n=1 Tax=Hydroge... 41 0.009 UniRef50_Q3JAV6 Putative uncharacterized protein n=2 Tax=Nitroso... 41 0.010 UniRef50_Q2NBT1 Putative uncharacterized protein n=1 Tax=Erythro... 41 0.010 UniRef50_B3ES66 Putative uncharacterized protein n=1 Tax=Candida... 41 0.010 UniRef50_A9AKZ2 Transcriptional regulator, TraR/DksA family n=5 ... 41 0.010 UniRef50_D1ACI4 Transcriptional regulator, TraR/DksA family n=2 ... 41 0.011 UniRef50_C6D536 Transcriptional regulator, TraR/DksA family n=2 ... 41 0.011 UniRef50_Q12E87 Transcriptional regulators, TraR/DksA family n=1... 41 0.011 UniRef50_C1SL94 DnaK suppressor protein n=1 Tax=Denitrovibrio ac... 41 0.011 UniRef50_B8H9G6 Transcriptional regulator, TraR/DksA family n=3 ... 41 0.011 UniRef50_A4G7K6 Putative uncharacterized protein n=1 Tax=Hermini... 41 0.012 UniRef50_A9DDI2 DnaK suppressor protein, putative n=2 Tax=Rhizob... 41 0.012 UniRef50_Q1IQ14 Serine phosphatase n=1 Tax=Candidatus Koribacter... 41 0.012 UniRef50_A1WBE4 Transcriptional regulator, TraR/DksA family n=3 ... 41 0.012 UniRef50_Q02C95 Transcriptional regulator, TraR/DksA family n=1 ... 41 0.012 UniRef50_UPI00016C3CE0 transcriptional regulators, TraR/DksA fam... 41 0.013 UniRef50_Q020R1 Serine phosphatase n=1 Tax=Candidatus Solibacter... 41 0.013 UniRef50_B7S312 Putative uncharacterized protein n=1 Tax=marine ... 41 0.013 UniRef50_A3IED4 DnaK suppressor protein n=2 Tax=Bacillaceae RepI... 41 0.013 UniRef50_P80872 General stress protein 16O n=2 Tax=Bacillus subt... 41 0.013 UniRef50_C9YVQ5 Putative uncharacterized protein n=1 Tax=Strepto... 41 0.013 UniRef50_A6FXL2 DnaK suppressor protein, putative n=1 Tax=Plesio... 41 0.013 UniRef50_C9S0U4 Transcriptional regulator, TraR/DksA family n=14... 41 0.014 UniRef50_B4D0A5 Transcriptional regulator, TraR/DksA family n=2 ... 41 0.014 UniRef50_C9NIY3 Transcriptional regulator, TraR/DksA family n=3 ... 41 0.015 UniRef50_B2UIX3 Transcriptional regulator, TraR/DksA family n=6 ... 41 0.015 UniRef50_C0QJK4 DksA2 n=1 Tax=Desulfobacterium autotrophicum HRM... 40 0.016 UniRef50_B8FAI8 Transcriptional regulator, TraR/DksA family n=1 ... 40 0.017 UniRef50_D0D572 Transcriptional regulator, TraR/DksA family n=1 ... 40 0.017 UniRef50_A1RF16 Transcriptional regulator, TraR/DksA family n=2 ... 40 0.018 UniRef50_C8XJQ6 Transcriptional regulator, TraR/DksA family n=1 ... 40 0.018 UniRef50_Q5WGI4 General stress protein GSP160 n=1 Tax=Bacillus c... 40 0.018 UniRef50_A1SZ57 Transcriptional regulator, TraR/DksA family prot... 40 0.018 UniRef50_A3X4N5 DnaK suppressor protein n=5 Tax=Rhodobacterales ... 40 0.019 UniRef50_B4UII3 Transcriptional regulator, TraR/DksA family n=4 ... 40 0.021 UniRef50_D1SGF0 Transcriptional regulator, TraR/DksA family n=1 ... 40 0.021 UniRef50_D0MD16 Transcriptional regulator, TraR/DksA family n=2 ... 40 0.023 UniRef50_Q0AHN9 Transcriptional regulators, TraR/DksA family pro... 40 0.025 UniRef50_UPI0001C4239D hypothetical protein BpOF4_09730 n=1 Tax=... 40 0.028 UniRef50_A7HEW6 Transcriptional regulator, TraR/DksA family n=4 ... 40 0.029 UniRef50_A1B0I3 Transcriptional regulator, TraR/DksA family n=9 ... 40 0.030 UniRef50_D2B0C3 Transcriptional regulator, TraR/DksA family n=1 ... 40 0.031 UniRef50_C6E710 Transcriptional regulator, TraR/DksA family n=3 ... 40 0.031 UniRef50_A4FJQ8 Putative uncharacterized protein n=1 Tax=Sacchar... 40 0.032 UniRef50_B9XR79 Transcriptional regulator, TraR/DksA family n=1 ... 40 0.034 UniRef50_A1VGY3 Transcriptional regulator, TraR/DksA family n=4 ... 39 0.035 UniRef50_D1U5V5 Transcriptional regulator, TraR/DksA family n=1 ... 39 0.035 UniRef50_Q3J1J5 DnaK suppressor protein n=5 Tax=Rhodobacter RepI... 39 0.036 UniRef50_B2ULP7 Transcriptional regulator, TraR/DksA family n=1 ... 39 0.038 UniRef50_C5RLG0 Transcriptional regulator, TraR/DksA family n=1 ... 39 0.046 UniRef50_Q029W8 Transcriptional regulator, TraR/DksA family n=1 ... 39 0.047 UniRef50_D2R2J7 Transcriptional regulator, TraR/DksA family n=1 ... 39 0.049 UniRef50_UPI00019074B1 putative DnaK suppressor protein n=1 Tax=... 39 0.052 UniRef50_B8GMT5 Transcriptional regulator, TraR/DksA family n=2 ... 39 0.052 UniRef50_Q1D808 DksA-like protein n=3 Tax=Cystobacterineae RepID... 39 0.054 >UniRef50_P0ABS3 DnaK suppressor protein n=247 Tax=Proteobacteria RepID=DKSA_ECO57 Length = 151 Score = 311 bits (796), Expect = 5e-84, Method: Compositional matrix adjust. Identities = 151/151 (100%), Positives = 151/151 (100%) Query: 1 MQEGQNRKTSSLSILAIAGVEPYQEKPGEEYMNEAQLAHFRRILEAWRNQLRDEVDRTVT 60 MQEGQNRKTSSLSILAIAGVEPYQEKPGEEYMNEAQLAHFRRILEAWRNQLRDEVDRTVT Sbjct: 1 MQEGQNRKTSSLSILAIAGVEPYQEKPGEEYMNEAQLAHFRRILEAWRNQLRDEVDRTVT 60 Query: 61 HMQDEAANFPDPVDRAAQEEEFSLELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVE 120 HMQDEAANFPDPVDRAAQEEEFSLELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVE Sbjct: 61 HMQDEAANFPDPVDRAAQEEEFSLELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVE 120 Query: 121 IGIRRLEARPTADLCIDCKTLAEIREKQMAG 151 IGIRRLEARPTADLCIDCKTLAEIREKQMAG Sbjct: 121 IGIRRLEARPTADLCIDCKTLAEIREKQMAG 151 >UniRef50_A7K6F3 DnaK suppressor protein (Fragment) n=48 Tax=Vibrionales RepID=A7K6F3_VIBSE Length = 208 Score = 249 bits (635), Expect = 2e-65, Method: Compositional matrix adjust. Identities = 116/142 (81%), Positives = 131/142 (92%) Query: 8 KTSSLSILAIAGVEPYQEKPGEEYMNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAA 67 K ++ ILAIAGVEPYQEKPGEEYM+ Q+ HF +IL AWR+QLR EVDRTV HMQDEAA Sbjct: 5 KKKTIGILAIAGVEPYQEKPGEEYMSPEQVEHFTKILTAWRDQLRAEVDRTVHHMQDEAA 64 Query: 68 NFPDPVDRAAQEEEFSLELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLE 127 NFPDPVDRA+QEEEFSLELRNRDRER+LIKKIEKTL K++++DFG+CESCGVEIG+RRLE Sbjct: 65 NFPDPVDRASQEEEFSLELRNRDRERRLIKKIEKTLDKIKEDDFGFCESCGVEIGVRRLE 124 Query: 128 ARPTADLCIDCKTLAEIREKQM 149 ARPTADLCIDCKTLAEI+EKQM Sbjct: 125 ARPTADLCIDCKTLAEIKEKQM 146 >UniRef50_Q89AR3 DnaK suppressor protein homolog n=7 Tax=Gammaproteobacteria RepID=DKSA_BUCBP Length = 151 Score = 234 bits (596), Expect = 8e-61, Method: Compositional matrix adjust. Identities = 105/151 (69%), Positives = 134/151 (88%) Query: 1 MQEGQNRKTSSLSILAIAGVEPYQEKPGEEYMNEAQLAHFRRILEAWRNQLRDEVDRTVT 60 MQ+ +N+K SSLSIL +AGV+PY+ K E+YMN Q+ HF++IL AW+NQLR+++ +T Sbjct: 1 MQKEKNKKQSSLSILFMAGVQPYKNKKNEKYMNTKQIDHFKKILIAWKNQLRNDISQTRL 60 Query: 61 HMQDEAANFPDPVDRAAQEEEFSLELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVE 120 ++QD+A N+PDP+DRA QEEEFS ELR+RDRERKLI+KIEKTLKKVE++DFGYCESCG+E Sbjct: 61 NIQDKATNYPDPIDRAVQEEEFSFELRHRDRERKLIEKIEKTLKKVENKDFGYCESCGIE 120 Query: 121 IGIRRLEARPTADLCIDCKTLAEIREKQMAG 151 IGI+RLEARPTA+LCIDCKTL+EIREKQ+ G Sbjct: 121 IGIKRLEARPTANLCIDCKTLSEIREKQILG 151 >UniRef50_P43758 DnaK suppressor protein homolog n=104 Tax=Proteobacteria RepID=DKSA_HAEIN Length = 145 Score = 227 bits (579), Expect = 7e-59, Method: Compositional matrix adjust. Identities = 107/142 (75%), Positives = 121/142 (85%) Query: 10 SSLSILAIAGVEPYQEKPGEEYMNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAANF 69 +SLS+L +AGV+PYQ K EEYMNE Q+ HFR+IL AW Q+ +E RTV HMQDE NF Sbjct: 4 ASLSLLDLAGVKPYQMKKDEEYMNEEQILHFRKILNAWHEQIVEEASRTVAHMQDEVTNF 63 Query: 70 PDPVDRAAQEEEFSLELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEAR 129 PDP DRA QEEEFSLELRNRDRERKL+KKIE TLKK++ +DFGYC+ CG EIGIRRLEAR Sbjct: 64 PDPADRATQEEEFSLELRNRDRERKLMKKIEATLKKLDTDDFGYCDCCGEEIGIRRLEAR 123 Query: 130 PTADLCIDCKTLAEIREKQMAG 151 PTADLCIDCKTLAEIREKQ+AG Sbjct: 124 PTADLCIDCKTLAEIREKQVAG 145 >UniRef50_A8PLZ9 Suppressor protein DksA n=3 Tax=Gammaproteobacteria RepID=A8PLZ9_9COXI Length = 295 Score = 179 bits (453), Expect = 3e-44, Method: Compositional matrix adjust. Identities = 83/133 (62%), Positives = 104/133 (78%) Query: 19 GVEPYQEKPGEEYMNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAANFPDPVDRAAQ 78 + PY+E+PGE+YM+ +Q A+FRR+L + L +++ RTV H+QDE PD DRA Q Sbjct: 163 NIAPYKERPGEDYMSSSQQAYFRRLLLQRKRVLLEDMGRTVHHLQDEGTPLPDMSDRATQ 222 Query: 79 EEEFSLELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDC 138 EEEF+LELR RDRERKLIKKIE L ++++ +G+C SCGVEIGIRRLEARPTA+LCIDC Sbjct: 223 EEEFNLELRARDRERKLIKKIEDALHQLDEGHYGFCSSCGVEIGIRRLEARPTANLCIDC 282 Query: 139 KTLAEIREKQMAG 151 KTL EIREKQ G Sbjct: 283 KTLDEIREKQTGG 295 >UniRef50_Q5UF45 Predicted DskA family protein n=4 Tax=Bacteria RepID=Q5UF45_9PROT Length = 202 Score = 163 bits (413), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 78/135 (57%), Positives = 101/135 (74%) Query: 17 IAGVEPYQEKPGEEYMNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAANFPDPVDRA 76 + +PY+ K E+YMN+ Q HF +L AW+ L +E ++T +Q + +NFPD +DRA Sbjct: 68 LKNFQPYRSKKSEKYMNKNQQKHFLGMLTAWKEALIEEQEKTEQLIQQDQSNFPDSLDRA 127 Query: 77 AQEEEFSLELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCI 136 A+EEEF LELR R+RERKLI KI+ +LK +ED +GYCESCGVEIGI+RLEARPTA CI Sbjct: 128 AKEEEFMLELRKRERERKLIAKIDLSLKDLEDNLYGYCESCGVEIGIKRLEARPTATKCI 187 Query: 137 DCKTLAEIREKQMAG 151 DCKT+ EI+EKQ G Sbjct: 188 DCKTVDEIKEKQQFG 202 >UniRef50_Q31G85 Transcriptional regulators, TraR/DksA family n=1 Tax=Thiomicrospira crunogena XCL-2 RepID=Q31G85_THICR Length = 142 Score = 149 bits (376), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 71/126 (56%), Positives = 93/126 (73%) Query: 23 YQEKPGEEYMNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAANFPDPVDRAAQEEEF 82 Y+ KPGEEYM+ L HF+ L AW+ QL E TV H++ +++ DP DRA+QEEEF Sbjct: 14 YEMKPGEEYMSPEMLEHFKNKLLAWKKQLIWEATNTVQHLRTDSSTPADPSDRASQEEEF 73 Query: 83 SLELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLA 142 +LELR RDRERKLI KI+K+L+ +ED D+GYC+ G EIG+ R+EARPTA L ++ KT Sbjct: 74 ALELRTRDRERKLISKIDKSLRDIEDGDYGYCKMSGEEIGLARMEARPTATLTVEMKTKQ 133 Query: 143 EIREKQ 148 E+REKQ Sbjct: 134 EMREKQ 139 >UniRef50_Q6SHS2 DnaK suppressor protein n=1 Tax=uncultured marine bacterium 311 RepID=Q6SHS2_9BACT Length = 190 Score = 148 bits (374), Expect = 5e-35, Method: Compositional matrix adjust. Identities = 72/137 (52%), Positives = 97/137 (70%), Gaps = 2/137 (1%) Query: 17 IAGVEPYQEKPGEEYMNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAANFPDPVDRA 76 +A VEPY+ E+YM+ Q HF +ILE W+ L+ E RT +Q+ + +F D DRA Sbjct: 54 LATVEPYKLNKKEKYMSAKQKKHFLKILERWKQLLQLEQSRTADKIQNNSNHFADDSDRA 113 Query: 77 AQEEEFSLELRNRDRERKLIKKIEKTLKKVEDEDFGYC--ESCGVEIGIRRLEARPTADL 134 EE F+LE++ R+RERKL+ KI++++K + + D+G+C +CGVEIGIRRLEARPTA L Sbjct: 114 THEEGFTLEIKTRERERKLLTKIDQSVKGLSNHDYGFCLNPNCGVEIGIRRLEARPTARL 173 Query: 135 CIDCKTLAEIREKQMAG 151 CIDCKTL EI EKQ G Sbjct: 174 CIDCKTLEEITEKQQYG 190 >UniRef50_A5EW31 RNA polymerase-binding protein DksA n=2 Tax=Gammaproteobacteria RepID=A5EW31_DICNV Length = 143 Score = 136 bits (343), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 68/127 (53%), Positives = 89/127 (70%) Query: 23 YQEKPGEEYMNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAANFPDPVDRAAQEEEF 82 Y E YM+E QL +F RIL+ W+ + + ++T +++DE D DRA+QEEEF Sbjct: 11 YTPAADEPYMSEQQLDYFSRILQEWKATILADSEKTREYLKDERPQTADLNDRASQEEEF 70 Query: 83 SLELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLA 142 SLELR RDRERKL++KI+K L++++ FGYCE C EIG RLEARPTA+LCIDCK LA Sbjct: 71 SLELRTRDRERKLLRKIDKALERIKQGHFGYCEQCDEEIGFHRLEARPTAELCIDCKHLA 130 Query: 143 EIREKQM 149 E +EK Sbjct: 131 ERKEKSF 137 >UniRef50_A0LCU1 Transcriptional regulator, TraR/DksA family n=2 Tax=Proteobacteria RepID=A0LCU1_MAGSM Length = 155 Score = 135 bits (340), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 69/136 (50%), Positives = 91/136 (66%), Gaps = 4/136 (2%) Query: 14 ILAIAGVEPYQEKPGEEYMNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAANFPDPV 73 I I E Y EEYM E Q A FR L W+ QL +E ++TV M +E A F DP Sbjct: 11 IADIILPEGYTPSEDEEYMCEMQRAFFRHQLLIWKQQLVEEAEKTVLGMHEEKAVFADPT 70 Query: 74 DRAAQEEEFSLELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTAD 133 DRA+ E + + ELR RDRERKLI KI++T++ +E++++G+C CGVEIG+ RL+ARP D Sbjct: 71 DRASLETDRNFELRTRDRERKLIGKIDRTIRTIEEDEYGFCSGCGVEIGLGRLQARPVTD 130 Query: 134 LCIDCKTLAEIREKQM 149 LCIDCKT +E+QM Sbjct: 131 LCIDCKT----KEEQM 142 >UniRef50_A7C5U4 Zn-finger, prokaryotic DksA/TraR C4 type n=1 Tax=Beggiatoa sp. PS RepID=A7C5U4_9GAMM Length = 155 Score = 135 bits (340), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 64/136 (47%), Positives = 87/136 (63%) Query: 12 LSILAIAGVEPYQEKPGEEYMNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAANFPD 71 +S + I + PY GEEYM+ QL HF+R+L W+ L D+V RTV MQD +NF D Sbjct: 1 MSEVQIPTITPYHSSEGEEYMSNKQLEHFQRVLLQWKQNLMDDVTRTVHQMQDNLSNFAD 60 Query: 72 PVDRAAQEEEFSLELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPT 131 P DRA QEEEF++ELR RDRERKLIKKI+ +LK ++ +++G+ + + + Sbjct: 61 PNDRATQEEEFTIELRTRDRERKLIKKIDASLKTIDTKEYGFVSVVALRLVFIAWKLDLM 120 Query: 132 ADLCIDCKTLAEIREK 147 CIDCKT E+REK Sbjct: 121 LAKCIDCKTRDEVREK 136 >UniRef50_Q21SV6 Transcriptional regulators, TraR/DksA family n=58 Tax=Betaproteobacteria RepID=Q21SV6_RHOFD Length = 429 Score = 127 bits (319), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 57/121 (47%), Positives = 83/121 (68%) Query: 27 PGEEYMNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAANFPDPVDRAAQEEEFSLEL 86 P +EYMN+ QLA FRR+L A + + +T H++ + PDP DRA EEE +LEL Sbjct: 305 PDDEYMNDTQLAFFRRVLTALKQDILSNAGQTTEHLRADTVVVPDPADRATIEEEHALEL 364 Query: 87 RNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAEIRE 146 R RDRERKL+KKIE++L +++ D+GYC+ G IG+ RL ARPTA+L ++ + E+++ Sbjct: 365 RTRDRERKLLKKIEQSLARIDSGDYGYCDETGEAIGVGRLLARPTANLSLEAQQRRELKQ 424 Query: 147 K 147 K Sbjct: 425 K 425 >UniRef50_Q12EM6 Transcriptional regulators, TraR/DksA family n=65 Tax=Betaproteobacteria RepID=Q12EM6_POLSJ Length = 450 Score = 122 bits (305), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 54/121 (44%), Positives = 81/121 (66%) Query: 27 PGEEYMNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAANFPDPVDRAAQEEEFSLEL 86 P EYMNE Q+A FR L + ++ + T H++++ PDP DRA EEE +LEL Sbjct: 326 PDSEYMNEKQMAFFRHKLSVLKQEIHNSAGETTEHLREDTVVVPDPADRATIEEEHALEL 385 Query: 87 RNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAEIRE 146 R RDRERKL+KKIE+++ +++ D+GYC+ G IG+ RL ARPTA+L ++ + E+++ Sbjct: 386 RTRDRERKLLKKIEQSIARIDSGDYGYCDETGEPIGVGRLIARPTANLSLEAQQRRELKQ 445 Query: 147 K 147 K Sbjct: 446 K 446 >UniRef50_Q0A892 Transcriptional regulators, TraR/DksA family n=10 Tax=Gammaproteobacteria RepID=Q0A892_ALHEH Length = 149 Score = 116 bits (291), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 57/121 (47%), Positives = 86/121 (71%) Query: 27 PGEEYMNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAANFPDPVDRAAQEEEFSLEL 86 P E+YMN+ QLA+FR++LE R ++ + ++ T H++D+ + PD DRA EEE+ LEL Sbjct: 25 PPEDYMNDEQLAYFRQLLEKERKEILEGLESTTRHLRDDNSREPDEHDRATLEEEYQLEL 84 Query: 87 RNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAEIRE 146 R R+RE +L++KI++ L+++E ++GYCE G IGI RL ARPTA L I+ K AE+ E Sbjct: 85 RIRERETRLLRKIDQALRRIETGEYGYCEVTGEPIGIPRLLARPTATLSIEAKERAEVEE 144 Query: 147 K 147 + Sbjct: 145 R 145 >UniRef50_A1AL35 Transcriptional regulator, TraR/DksA family n=8 Tax=Deltaproteobacteria RepID=A1AL35_PELPD Length = 118 Score = 114 bits (284), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 57/117 (48%), Positives = 76/117 (64%) Query: 32 MNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAANFPDPVDRAAQEEEFSLELRNRDR 91 M +L +FR +L L E +TVT M +++NFPDP DRA QE + + ELR RDR Sbjct: 1 MEAEKLEYFRNVLMEEMKSLLSEAGKTVTEMTADSSNFPDPTDRATQESDRNFELRIRDR 60 Query: 92 ERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAEIREKQ 148 ERKLI KI++ L +++ +FG CE CG EIG RL+ RP LCI+CK AE +EK+ Sbjct: 61 ERKLINKIKEALSRIDSGEFGICEECGDEIGEARLKVRPVTTLCINCKLEAEKKEKR 117 >UniRef50_B8H0C0 DnaK suppressor protein homolog n=110 Tax=Bacteria RepID=DKSA_CAUCN Length = 142 Score = 114 bits (284), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 57/126 (45%), Positives = 83/126 (65%), Gaps = 2/126 (1%) Query: 16 AIAGVEPYQEKPGEE--YMNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAANFPDPV 73 A VE +P E+ +MN+ QL +F++ L AW+ ++ E TV+H+Q E N D Sbjct: 4 ATVLVEKSDYRPSEDEPFMNDRQLEYFKQKLLAWKEEILRESRETVSHLQKETENHADLA 63 Query: 74 DRAAQEEEFSLELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTAD 133 DRA+ E + +LELR RDR+RKLI KI++ L++VED +GYCE G IG+ RLEARPTA Sbjct: 64 DRASSETDRALELRTRDRQRKLISKIDQALRRVEDGSYGYCEETGEPIGLARLEARPTAT 123 Query: 134 LCIDCK 139 + ++ + Sbjct: 124 MSVEAQ 129 >UniRef50_A3RXC3 DnaK suppressor protein n=1 Tax=Ralstonia solanacearum UW551 RepID=A3RXC3_RALSO Length = 224 Score = 112 bits (279), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 60/138 (43%), Positives = 90/138 (65%), Gaps = 4/138 (2%) Query: 10 SSLSILAIAGVEPYQEKPGEEYMNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAANF 69 SS ++L A + +K +YMNEAQLA F+ LE R+ + +T H++ E Sbjct: 87 SSKTLLTEAEILKMSDK---DYMNEAQLAFFKDRLEKLRDDILKNAGQTTEHLR-ETVIV 142 Query: 70 PDPVDRAAQEEEFSLELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEAR 129 PDP DRA EEE +LELR RDRERKL+KK+E++++++++ ++GYC+ G IG+ RL AR Sbjct: 143 PDPADRATIEEEHALELRTRDRERKLLKKVEQSIQRIDEGNYGYCDETGEPIGVPRLLAR 202 Query: 130 PTADLCIDCKTLAEIREK 147 PTA L ++ + E R+K Sbjct: 203 PTATLTLEAQERREKRQK 220 >UniRef50_B5EG80 Transcriptional regulator, TraR/DksA family n=4 Tax=Proteobacteria RepID=B5EG80_GEOBB Length = 118 Score = 111 bits (277), Expect = 8e-24, Method: Compositional matrix adjust. Identities = 57/116 (49%), Positives = 74/116 (63%) Query: 32 MNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAANFPDPVDRAAQEEEFSLELRNRDR 91 MN +L +FR IL+ + L +E RTV+ M + NFPDP DRA QE + + ELR RDR Sbjct: 1 MNTEKLEYFRGILQEEKRSLLEEAGRTVSEMTSDTTNFPDPTDRATQESDRTFELRIRDR 60 Query: 92 ERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAEIREK 147 ERKLI KI++ L ++E FG CE C +I RL+ARP LCIDCK E +E+ Sbjct: 61 ERKLIVKIQEALARIEAGTFGICEVCEEDISEARLKARPVTTLCIDCKMEQEKKER 116 >UniRef50_A7HW84 Transcriptional regulator, TraR/DksA family n=68 Tax=Alphaproteobacteria RepID=A7HW84_PARL1 Length = 146 Score = 110 bits (276), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 55/140 (39%), Positives = 87/140 (62%), Gaps = 3/140 (2%) Query: 8 KTSSLSILAIAGVEPYQEKPGEEYMNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAA 67 ++ +++ G P ++P +MN+ Q +FRR LE W+ + E T+ H+QD++ Sbjct: 5 RSPRMAVRLPKGYMPSDDEP---FMNKRQKEYFRRKLEKWKEDILKENRETLQHLQDDSV 61 Query: 68 NFPDPVDRAAQEEEFSLELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLE 127 PD DRA+ E E SLELR RDR+RKL+ KI+ ++++++ +GYCE G I ++RL+ Sbjct: 62 QHPDIADRASSETERSLELRTRDRQRKLVSKIDAAIRRIDEGTYGYCEETGEPISLKRLD 121 Query: 128 ARPTADLCIDCKTLAEIREK 147 ARP A L I+ + E REK Sbjct: 122 ARPIATLSIEAQERHERREK 141 >UniRef50_Q3A0W2 DnaK suppressor protein n=2 Tax=Proteobacteria RepID=Q3A0W2_PELCD Length = 118 Score = 109 bits (272), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 57/116 (49%), Positives = 74/116 (63%) Query: 32 MNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAANFPDPVDRAAQEEEFSLELRNRDR 91 M++ L F+ ILE+ L + +TV+ M D+ +NFPDP DRA+ E + + ELR RDR Sbjct: 1 MDQEALKEFKAILESQLEALLRDAGKTVSEMTDDQSNFPDPTDRASLESDRNFELRIRDR 60 Query: 92 ERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAEIREK 147 ERKLI KI + L+++E FG CE C IG RL ARP LCIDCKT E +EK Sbjct: 61 ERKLIMKIRQALERIEQGTFGECECCEEPIGAERLRARPVTTLCIDCKTEQERKEK 116 >UniRef50_A6T2Z9 DnaK suppressor protein n=5 Tax=Betaproteobacteria RepID=A6T2Z9_JANMA Length = 310 Score = 108 bits (271), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 53/119 (44%), Positives = 78/119 (65%), Gaps = 1/119 (0%) Query: 29 EEYMNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAANFPDPVDRAAQEEEFSLELRN 88 ++YMN+AQLA F+ L+ L D T H++ E PDP DRA EEE +LELR Sbjct: 189 KDYMNDAQLAFFKNRLQQLEKDLLKNADETTEHLR-ETVLVPDPADRATIEEEHALELRT 247 Query: 89 RDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAEIREK 147 RDRERKL+KK++++L ++ ++G+CE G IG+ RL ARPTA L ++ + E+++K Sbjct: 248 RDRERKLLKKVQQSLLSIDSGEYGWCEETGEPIGVPRLLARPTATLSLEAQQRRELKQK 306 >UniRef50_B4SQA3 Transcriptional regulator, TraR/DksA family n=35 Tax=Proteobacteria RepID=B4SQA3_STRM5 Length = 405 Score = 106 bits (265), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 61/131 (46%), Positives = 84/131 (64%), Gaps = 3/131 (2%) Query: 18 AGVEPYQEKPGEEYMNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAANFPDPVDRAA 77 AG +P E EEYM+ Q +FR+ L+ WR L +E +T+ ++++E + D +RA Sbjct: 275 AGYKPSSE---EEYMSPLQQEYFRQRLQNWRADLVEESKQTIENLREEVRDIGDEAERAT 331 Query: 78 QEEEFSLELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCID 137 +E E SLELR RDR RKLI KI+ TLK++E D+GYC G EIG+ RLEAR TA+ ID Sbjct: 332 RETENSLELRTRDRYRKLIGKIDSTLKRLEAGDYGYCVDTGEEIGLERLEARLTAERTID 391 Query: 138 CKTLAEIREKQ 148 + E +KQ Sbjct: 392 AQERWEHLQKQ 402 >UniRef50_Q1GI88 Transcriptional regulators TraR/DksA family n=26 Tax=Alphaproteobacteria RepID=Q1GI88_SILST Length = 158 Score = 105 bits (263), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 51/127 (40%), Positives = 83/127 (65%) Query: 21 EPYQEKPGEEYMNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAANFPDPVDRAAQEE 80 E Y+ E +MNE Q+ +FRR L W+ +L DE T+ +Q+ N PD DRA++E Sbjct: 27 EDYRPAEDEPFMNERQMEYFRRKLLNWKAELLDESRDTIEGLQENTRNIPDVADRASEET 86 Query: 81 EFSLELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKT 140 + +LELR RDR+RKL+ KI+ ++++++ ++GYC+ G I ++RL+ARP A + ++ + Sbjct: 87 DRALELRTRDRQRKLVAKIDAAIRRIDEGEYGYCDVTGEPISLKRLDARPIATMSLEAQE 146 Query: 141 LAEIREK 147 E REK Sbjct: 147 RHERREK 153 >UniRef50_Q2LSS1 DnaK suppressor protein n=13 Tax=Deltaproteobacteria RepID=Q2LSS1_SYNAS Length = 150 Score = 105 bits (263), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 54/119 (45%), Positives = 76/119 (63%) Query: 29 EEYMNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAANFPDPVDRAAQEEEFSLELRN 88 E ++ +L FR +L N+L ++ +TV M D N+PDP DRA+ E + + ELR Sbjct: 28 EMALSHDKLEFFRMLLTQKINELLEDAGKTVADMTDSKENYPDPTDRASLESDRNFELRM 87 Query: 89 RDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAEIREK 147 RDRERKLI K+++ +K++++ +FG CE CG I +RL ARP LCIDCKT E EK Sbjct: 88 RDRERKLIAKMQEAIKRIDEGEFGLCEVCGGPISEKRLMARPVTTLCIDCKTKQEKLEK 146 >UniRef50_Q0EXX5 Transcriptional regulators, TraR/DksA family protein n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0EXX5_9PROT Length = 123 Score = 97.1 bits (240), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 47/117 (40%), Positives = 77/117 (65%), Gaps = 1/117 (0%) Query: 32 MNEAQLAHFRRILEAWRNQLRDEVDRTVTHM-QDEAANFPDPVDRAAQEEEFSLELRNRD 90 + + QLA F + L W+ +L V M + E +FPDP D+A+ E + + +L+ +D Sbjct: 3 LTKKQLADFEKQLMDWKAELEIGQSENVQAMTEQEQTSFPDPTDQASMEIDRNFDLKIKD 62 Query: 91 RERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAEIREK 147 RER+LIKKI++ ++++++ +FG C++CG I ++RLEARP LCI+CKT E E+ Sbjct: 63 RERRLIKKIDQAIERIQNGEFGECDACGGPISVKRLEARPVTTLCIECKTAQEQEER 119 >UniRef50_B8J371 Transcriptional regulator, TraR/DksA family n=2 Tax=Desulfovibrio RepID=B8J371_DESDA Length = 120 Score = 95.1 bits (235), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 45/108 (41%), Positives = 66/108 (61%) Query: 32 MNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAANFPDPVDRAAQEEEFSLELRNRDR 91 M+ L +FR++L + + + D T+ + D F DP DRA E + + LR RDR Sbjct: 1 MDHKDLEYFRKLLSGMLEEAQQKGDSTIEELTDSNEVFADPADRATAESDRAFTLRIRDR 60 Query: 92 ERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCK 139 ER+LI+KI+ L +++D +G CE CG +I I RL+ARP LCI+CK Sbjct: 61 ERRLIRKIQAALTRIDDGTYGICEDCGDDISIPRLKARPVTRLCINCK 108 >UniRef50_Q1MS84 Molecular chaperone dnaK n=4 Tax=Deltaproteobacteria RepID=Q1MS84_LAWIP Length = 133 Score = 92.8 bits (229), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 43/109 (39%), Positives = 68/109 (62%) Query: 32 MNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAANFPDPVDRAAQEEEFSLELRNRDR 91 + + + +FR +L + + + D T+ + D F DP DRA+ E + + LR RDR Sbjct: 14 LEQKDIEYFRALLTTMLEEAQHKGDSTLEDLTDGNEIFADPADRASAESDRAFTLRIRDR 73 Query: 92 ERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKT 140 ER+LI+KI+ L++++D +G CE CG +IG RL+ARP LCI+CK+ Sbjct: 74 ERRLIRKIQSALQRIDDGTYGVCEDCGDDIGTPRLKARPVTKLCINCKS 122 >UniRef50_UPI0001AEC064 DnaK suppressor protein n=1 Tax=Alteromonas macleodii ATCC 27126 RepID=UPI0001AEC064 Length = 140 Score = 91.7 bits (226), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 51/126 (40%), Positives = 74/126 (58%), Gaps = 13/126 (10%) Query: 29 EEYMNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAANFPDP------VDRAAQEEEF 82 ++YMN+ QL F+ +L + Q T+ H+++ A+ P VDRA EEE Sbjct: 16 DDYMNDEQLEFFKELLNDLKQQ-------TMAHIEEMKASLSQPPEINDEVDRAQYEEES 68 Query: 83 SLELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLA 142 L LR DRERKL+ KI+K+L++++D+ FGYC G IGI RL RP ++ C D K + Sbjct: 69 RLSLRILDRERKLLPKIDKSLRRIKDKSFGYCLETGEPIGIPRLLIRPVSEYCADVKMVN 128 Query: 143 EIREKQ 148 E RE+ Sbjct: 129 EGREQH 134 >UniRef50_B5YK78 RNA polymerase-binding protein DksA n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YK78_THEYD Length = 123 Score = 89.7 bits (221), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 44/74 (59%), Positives = 55/74 (74%) Query: 67 ANFPDPVDRAAQEEEFSLELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRL 126 +N + D A+QE + S LR RDRERKL+KKIEKTL+K+ + +G CE+CG EI I RL Sbjct: 39 SNLSEIGDIASQEIDRSFLLRLRDRERKLLKKIEKTLEKINNGTYGICEACGAEIPIERL 98 Query: 127 EARPTADLCIDCKT 140 EARP DLCI+CKT Sbjct: 99 EARPVTDLCIECKT 112 >UniRef50_B2V8G8 Transcriptional regulator, TraR/DksA family n=4 Tax=Hydrogenothermaceae RepID=B2V8G8_SULSY Length = 118 Score = 87.8 bits (216), Expect = 9e-17, Method: Compositional matrix adjust. Identities = 49/109 (44%), Positives = 66/109 (60%), Gaps = 6/109 (5%) Query: 30 EYMNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAANF--PDPVDRAAQEEEFSLELR 87 +++ Q+ + IL WRNQL ++ R EA +F D ++RA E L LR Sbjct: 2 QHLTPEQIEELKNILLEWRNQLIEDTKRNT----GEALSFEGADEMERAEAETSRILTLR 57 Query: 88 NRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCI 136 N DRERKL+K+IE+TL+K+E +G CESCG EI RL+ RP A LCI Sbjct: 58 NLDRERKLLKRIEQTLQKIEYGVYGICESCGAEIPYERLKVRPIASLCI 106 >UniRef50_D2L3E3 Transcriptional regulator, TraR/DksA family n=2 Tax=Desulfovibrio RepID=D2L3E3_9DELT Length = 131 Score = 85.5 bits (210), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 44/104 (42%), Positives = 63/104 (60%), Gaps = 4/104 (3%) Query: 40 FRRILEAWRNQLRDEVDRTVTHMQDEAANFPDPVDRAAQEEEFSLELRNRDRERKLIKKI 99 R +LE Q RD +D + E A F D DRA E + L + R+R+R+LI +I Sbjct: 13 LRDMLETLNGQSRDTLDV----LAREVAAFADVADRATAESDRHLTILMRERDRQLIGEI 68 Query: 100 EKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAE 143 + L +V+D D+G C+ CG EIG+ RL A+PTA LC+ CK++ E Sbjct: 69 NEALARVKDGDYGICQECGEEIGLARLRAQPTATLCVHCKSMLE 112 >UniRef50_A7H9X1 Transcriptional regulator, TraR/DksA family n=7 Tax=Cystobacterineae RepID=A7H9X1_ANADF Length = 120 Score = 85.5 bits (210), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 48/120 (40%), Positives = 68/120 (56%), Gaps = 1/120 (0%) Query: 32 MNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQD-EAANFPDPVDRAAQEEEFSLELRNRD 90 MN+ L F+ +LE + QL +T+T + + PD +D A+ E S+ R RD Sbjct: 1 MNKKDLKKFKTMLEESKRQLLLSAKKTLTEEASFDTDDLPDEIDLASSEYTQSMIFRLRD 60 Query: 91 RERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAEIREKQMA 150 RE+ L+ KI+K L ++E+ FG CE C EI ++RLEARP LCI CK E +EK Sbjct: 61 REKFLLAKIDKALARIENGTFGICERCEEEISVKRLEARPVTTLCIRCKEEQEQKEKSFG 120 >UniRef50_B4U7Z4 Transcriptional regulator, TraR/DksA family n=3 Tax=Aquificaceae RepID=B4U7Z4_HYDS0 Length = 118 Score = 85.1 bits (209), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 43/112 (38%), Positives = 64/112 (57%) Query: 32 MNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAANFPDPVDRAAQEEEFSLELRNRDR 91 + E QL + +L +N + + +++ + ++D + D +DR E L R DR Sbjct: 2 LTEEQLNELKNMLIEQKNMIIERLEKQIDDVEDVTFSGGDELDRGGLEGSRLLRYRTTDR 61 Query: 92 ERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAE 143 E KL+KKIE TL ++E+ +GYCE CG EI RL+ARP +CI CK L E Sbjct: 62 ETKLLKKIEYTLARIENGTYGYCEVCGAEIPYERLKARPVTSMCIRCKELEE 113 >UniRef50_Q2SLB9 DnaK suppressor protein n=7 Tax=Gammaproteobacteria RepID=Q2SLB9_HAHCH Length = 141 Score = 84.0 bits (206), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 48/120 (40%), Positives = 70/120 (58%), Gaps = 1/120 (0%) Query: 27 PGEEYMNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAANFPDPVDRAAQEEEFSLEL 86 P +YM+ QLA F+ L A D + + +F D DRA++EE+ ++ L Sbjct: 18 PESDYMSAEQLAFFKDRLMALHESTCDRIQEARDQITG-PMDFSDENDRASREEQSAIAL 76 Query: 87 RNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAEIRE 146 R DRE+KL+ KI+++LK++ +GYC G IGI RL ARPTA+ C + K L EI+E Sbjct: 77 RIVDREQKLLPKIQQSLKRIRLGTYGYCLESGEPIGIPRLLARPTAEYCAEVKALKEIKE 136 >UniRef50_A8GD52 Transcriptional regulator, TraR/DksA family n=9 Tax=Gammaproteobacteria RepID=A8GD52_SERP5 Length = 141 Score = 82.0 bits (201), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 48/129 (37%), Positives = 71/129 (55%), Gaps = 13/129 (10%) Query: 27 PGEEYMNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQ------DEAANFPDPVDRAAQEE 80 P +YMN AQ A FR+ +L+DE + + H++ D D D+AA+EE Sbjct: 16 PESDYMNPAQRAFFRQ-------RLQDEQQKLLQHIEALKRDIDGGEVSGDEADKAAREE 68 Query: 81 EFSLELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKT 140 + L R DRE +L+ KI L ++ + ++GYC G IG+ RL RPTA+L I+ KT Sbjct: 69 DLRLLFRQLDRESRLLPKISAALTRLHNGEYGYCRESGEPIGLARLLLRPTAELSIEAKT 128 Query: 141 LAEIREKQM 149 E+RE + Sbjct: 129 AQEMREPHL 137 >UniRef50_Q1JWV8 Transcriptional regulators, TraR/DksA family n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JWV8_DESAC Length = 139 Score = 80.1 bits (196), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 42/135 (31%), Positives = 73/135 (54%), Gaps = 3/135 (2%) Query: 16 AIAGVEPYQEKPGEEYMNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAANFPDPVDR 75 + P++E+P YMN+ QL +F L+ WR QL+ E M++E + V++ Sbjct: 4 VVGSYHPHEEEP---YMNQRQLDYFESQLKQWRTQLQQEAHDATREMREENVRAAELVEQ 60 Query: 76 AAQEEEFSLELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLC 135 + E + + L + DR+ +L+ +I L ++++ +GYC G EIG+RRL A P A L Sbjct: 61 SLSEYQRRMTLISHDRKSRLLAQINAALLRIKEGSYGYCVETGEEIGLRRLLAYPAAFLL 120 Query: 136 IDCKTLAEIREKQMA 150 ++ + E R + A Sbjct: 121 VEVQEAREHRSRSFA 135 >UniRef50_C6HWS3 Transcriptional regulator, TraR/DksA family n=3 Tax=Leptospirillum RepID=C6HWS3_9BACT Length = 121 Score = 79.7 bits (195), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 43/110 (39%), Positives = 65/110 (59%), Gaps = 1/110 (0%) Query: 35 AQLAHFRRILEAWRNQLRDEVDRTV-THMQDEAANFPDPVDRAAQEEEFSLELRNRDRER 93 A R ILE + ++ V+RT+ T ++ FPDP D A+ EE R ++RE+ Sbjct: 2 AGYEKVREILEQQKREILSGVERTLQTGVEKGVELFPDPADLASVEEIQGFSYRLKEREK 61 Query: 94 KLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAE 143 KL++KI++ L+++E+ FG CE CG I +R+ ARP CI CKT+ E Sbjct: 62 KLLRKIDEALERIEEGSFGICERCGEAIEEKRMLARPVTTYCIACKTILE 111 >UniRef50_B1J6V4 Transcriptional regulator, TraR/DksA family n=4 Tax=Pseudomonas RepID=B1J6V4_PSEPW Length = 143 Score = 79.3 bits (194), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 48/124 (38%), Positives = 74/124 (59%), Gaps = 3/124 (2%) Query: 27 PGEEYMNEAQLAHFRRILEAWRNQLRDEVDRTVTHM-QDEAANFPDPVDRAAQEEEFSLE 85 P E YM+ AQ A FR +L + R +L+D + M Q E ++ DP D EE+ + Sbjct: 19 PDETYMDAAQQAFFRALLLSQRKELQDRISGEFEAMRQFEPSS--DPSDLGTVEEQRQWQ 76 Query: 86 LRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAEIR 145 LR +RE+KL+ KI++ L+++ ++G+C+ G IG+RRL RPTA L I+ K E R Sbjct: 77 LRLLEREKKLLDKIDEALERLSRGEYGWCKETGEPIGLRRLLLRPTATLSIEAKERQERR 136 Query: 146 EKQM 149 E+ + Sbjct: 137 ERHI 140 >UniRef50_A4SHJ5 DnaK suppressor protein n=3 Tax=Gammaproteobacteria RepID=A4SHJ5_AERS4 Length = 128 Score = 75.9 bits (185), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 37/121 (30%), Positives = 72/121 (59%), Gaps = 1/121 (0%) Query: 30 EYMNEAQLAHFRRILEAWRNQLRDEVDRTVTH-MQDEAANFPDPVDRAAQEEEFSLELRN 88 ++M + QLA ++ +E +L D ++ + + + D +DRA+ EE LEL Sbjct: 3 DFMTKDQLAFYKGQIERQILELEDRLNSQASQAIATDTNEMADEIDRASIEEARRLELNR 62 Query: 89 RDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAEIREKQ 148 + ++ ++K++ L+++ + DFGYCESCG EI ++RL+ARP + C++C++ E + Sbjct: 63 IEHDKLHLRKLQGALRRINEGDFGYCESCGDEISLKRLQARPESRFCVECQSTKEFNDTH 122 Query: 149 M 149 + Sbjct: 123 V 123 >UniRef50_B8J655 Transcriptional regulator, TraR/DksA family n=3 Tax=Anaeromyxobacter RepID=B8J655_ANAD2 Length = 122 Score = 73.6 bits (179), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 50/116 (43%), Positives = 63/116 (54%), Gaps = 4/116 (3%) Query: 32 MNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAAN----FPDPVDRAAQEEEFSLELR 87 MN + +RRIL A L + +R V M D PDP DRA EE + LR Sbjct: 1 MNARETERYRRILAAQLEALVGQGERAVHEMADSEGGGEVAIPDPNDRATAEERRNWALR 60 Query: 88 NRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAE 143 RDR+R+L+ K++ L +++ FG C SCG I RL ARP DLCI CKT AE Sbjct: 61 LRDRDRRLLGKVQAALARLDAGTFGTCTSCGAPISAARLRARPVTDLCIACKTEAE 116 >UniRef50_A5W685 Transcriptional regulator, TraR/DksA family n=11 Tax=Pseudomonas RepID=A5W685_PSEP1 Length = 154 Score = 73.2 bits (178), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 39/113 (34%), Positives = 67/113 (59%), Gaps = 3/113 (2%) Query: 28 GEEYMNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAANFP-DPVDRAAQEEEFSLEL 86 ++YMN QLA F +L+A + + + ++ + T + E + P DP D A+ EEE S + Sbjct: 31 ADDYMNADQLAFFTELLQAMKVETHERIELSRTTI--EGLDTPSDPADVASVEEERSWLV 88 Query: 87 RNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCK 139 DR+++L+ ++E L ++ DE FG+C+ G IG++RL PT CI+ + Sbjct: 89 NAIDRDQRLLPQLEMALDRIADESFGWCDDSGEPIGLKRLLISPTTKYCIEAQ 141 >UniRef50_Q2GI38 DnaK suppressor protein n=9 Tax=Anaplasmataceae RepID=Q2GI38_EHRCR Length = 152 Score = 71.2 bits (173), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 46/118 (38%), Positives = 63/118 (53%), Gaps = 4/118 (3%) Query: 31 YMNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAANFPDPVDRAAQEEEFSLELRNRD 90 YMN QL +FR+ L WR L+ E + T + A+ D D A +E L L R Sbjct: 19 YMNHKQLEYFRQKLIKWREVLQKESEELATELLRPQAD-ADLTDMATKEHNIVLILNTRK 77 Query: 91 RERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAEIREKQ 148 R LI +I K +++++D +GYCE G +IGI RLEA P I+ + E REKQ Sbjct: 78 RNEALIIEINKAIQRIDDGLYGYCEETGEKIGIARLEANPITLYSIEEQ---ERREKQ 132 >UniRef50_D0HX41 DnaK suppressor protein n=1 Tax=Vibrio cholerae CT 5369-93 RepID=D0HX41_VIBCH Length = 79 Score = 71.2 bits (173), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 32/38 (84%), Positives = 36/38 (94%) Query: 95 LIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTA 132 +IKKIEKTL K+++EDFGYCESCGVEIGIRRLEA PTA Sbjct: 1 MIKKIEKTLDKIKEEDFGYCESCGVEIGIRRLEAPPTA 38 >UniRef50_Q0VNX0 DnaK suppressor protein homolog, DksA/TraR family n=2 Tax=Alcanivorax RepID=Q0VNX0_ALCBS Length = 140 Score = 70.9 bits (172), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 41/123 (33%), Positives = 65/123 (52%), Gaps = 2/123 (1%) Query: 28 GEEYMNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAANFPDPVDRAAQEEEFSLELR 87 +YMN +Q FR+ L A + + ++Q A DP+D A +EE +LR Sbjct: 15 ASQYMNASQREFFRKRLLALALECEQHLGNARNNLQTPAQ--ADPLDAAVEEETCRHQLR 72 Query: 88 NRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAEIREK 147 R++ L+ KI L+++++ D+GYC+ G IG+ RL ARPT + C + K E E+ Sbjct: 73 FMARQQALLGKIRGALRRLQNGDYGYCKISGDPIGLPRLLARPTTEYCAEVKARLEQNER 132 Query: 148 QMA 150 A Sbjct: 133 HYA 135 >UniRef50_C8PIH5 DnaK suppressor protein n=1 Tax=Campylobacter gracilis RM3268 RepID=C8PIH5_9PROT Length = 118 Score = 70.9 bits (172), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 39/113 (34%), Positives = 62/113 (54%), Gaps = 1/113 (0%) Query: 32 MNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAAN-FPDPVDRAAQEEEFSLELRNRD 90 M + +L +++ILE R QL ++ +V + + N D D A+ + S+E Sbjct: 1 MKKNELKFYKKILEEKREQLIANINSSVNEISELRENKAADDFDVASMNTDLSIEYSLNV 60 Query: 91 RERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAE 143 ++K +IE LK++E+ +G CESCG +I + RL+ P A LCI CK AE Sbjct: 61 NQQKAFLEIESALKRIENGTYGLCESCGEQISLERLKVNPEARLCISCKEQAE 113 >UniRef50_D0LZD2 Transcriptional regulator, TraR/DksA family n=3 Tax=Myxococcales RepID=D0LZD2_HALO1 Length = 124 Score = 68.9 bits (167), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 40/109 (36%), Positives = 60/109 (55%), Gaps = 1/109 (0%) Query: 32 MNEAQLAHFRRILEAWRNQLRDEVDRTVTH-MQDEAANFPDPVDRAAQEEEFSLELRNRD 90 ++ + FR +LE R + + +RT+ M + + D +D A+ E S E R R Sbjct: 5 LSAKDIEKFRDLLENKRRLVLERANRTLHEDMTLDPDDLADEMDLASSESYQSFEFRLRG 64 Query: 91 RERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCK 139 RE+ L+ K++ L+K+ + FG CE C IG +RLEARP LCI CK Sbjct: 65 REKSLLNKLDLALRKLGEGTFGICEVCEEPIGKKRLEARPETTLCIQCK 113 >UniRef50_D2L9K5 Transcriptional regulator, TraR/DksA family n=2 Tax=Desulfovibrio RepID=D2L9K5_9DELT Length = 120 Score = 66.6 bits (161), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 42/115 (36%), Positives = 66/115 (57%) Query: 32 MNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAANFPDPVDRAAQEEEFSLELRNRDR 91 M+ + FR +L + + + + T+ M D + DP DRA E + + LR RDR Sbjct: 1 MDSKDVEFFRELLNGMLHDILKKGEETIEDMTDTVEVYADPADRATAESDRAFTLRLRDR 60 Query: 92 ERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAEIRE 146 ER+LIKKI++ L ++++ +G C CG +I + R++ARP LCI CK+ E E Sbjct: 61 ERRLIKKIKEALDRIDEGTYGECVECGEDISVARMKARPVTTLCIKCKSRQEADE 115 >UniRef50_C8X580 Transcriptional regulator, TraR/DksA family n=1 Tax=Desulfohalobium retbaense DSM 5692 RepID=C8X580_DESRD Length = 115 Score = 64.7 bits (156), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 37/112 (33%), Positives = 62/112 (55%), Gaps = 8/112 (7%) Query: 32 MNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAANFP----DPVDRAAQEEEFSLELR 87 M+ QL H +L +Q + E++ + MQ++ A P DP D+A + L L Sbjct: 1 MDREQLHHMNTVL----SQKKQELEEAIGQMQNDLATMPHNLADPADQATLSTDRQLALL 56 Query: 88 NRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCK 139 + R + ++E+ L ++ + ++G CE CG EIG+ RL A P+A LCI+C+ Sbjct: 57 RQQRLLHQLHEVEQALHQLANGEYGLCEECGEEIGVPRLVACPSARLCIECQ 108 >UniRef50_D0LUD2 Transcriptional regulator, TraR/DksA family n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LUD2_HALO1 Length = 127 Score = 63.2 bits (152), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 39/107 (36%), Positives = 56/107 (52%), Gaps = 2/107 (1%) Query: 36 QLAHFRRILEAWRNQLRDEVDRTV--THMQDEAANFPDPVDRAAQEEEFSLELRNRDRER 93 Q R L R QL D V + + +D D +D + +E +S +LR DRE Sbjct: 6 QTEELRTRLTTQRRQLVDSVTSAIGFSMDRDRDRVGRDSLDESTEEAMYSTQLRLHDRET 65 Query: 94 KLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKT 140 L+ KI+ L++++ CE CG EI ++RL ARP LCIDCK+ Sbjct: 66 FLLNKIDAALERLKAGTIDECEECGGEISVQRLIARPVTTLCIDCKS 112 >UniRef50_Q2YD37 Transcriptional regulators, TraR/DksA family n=2 Tax=Nitrosomonadaceae RepID=Q2YD37_NITMU Length = 131 Score = 63.2 bits (152), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 40/121 (33%), Positives = 60/121 (49%), Gaps = 8/121 (6%) Query: 32 MNEAQLAHFRRILEAWRNQLRDEVDRTV-----THMQDEAANFPDPVDRAAQEEEFSLEL 86 E QLA + +L+ QLR+EV + H D A + DP D + + + Sbjct: 4 FTEEQLAQLKEVLQQRYLQLREEVRDELESSGDQHYADLAGSVADPGDASVADMLVDVGA 63 Query: 87 RNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAEIRE 146 DR+ ++++E LK++ D D+G C CG EIG RL PTA C+ C+ E+ E Sbjct: 64 NLVDRQVNEMREVEAALKRLADLDYGDCIDCGGEIGFDRLMVYPTAQRCVRCQ---EVHE 120 Query: 147 K 147 K Sbjct: 121 K 121 >UniRef50_B6BSH6 DnaK suppressor protein n=6 Tax=Bacteria RepID=B6BSH6_9RICK Length = 180 Score = 62.0 bits (149), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 36/115 (31%), Positives = 62/115 (53%), Gaps = 1/115 (0%) Query: 23 YQEKPGEEYMNEAQLAHFRRILEAWRNQLRDEVDRTVTH-MQDEAANFPDPVDRAAQEEE 81 Y K E+YM E FR L W+ +L + + + D+ + D VD+A+ + Sbjct: 50 YVPKDTEKYMCEKHKVFFRMRLTEWKKELVKANNEALYNGSMDDNSISADIVDQASSYTD 109 Query: 82 FSLELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCI 136 ++E++ +R+ KLI +I+K L ++ ++ +GYC IG++RL ARP A I Sbjct: 110 KNVEMKAINRQIKLISEIDKALARIREDIYGYCLDTAEPIGLKRLMARPVAKYTI 164 >UniRef50_A4XDN2 Zinc finger, DksA/TraR C4-type n=5 Tax=Actinomycetales RepID=A4XDN2_SALTO Length = 139 Score = 61.2 bits (147), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 40/121 (33%), Positives = 63/121 (52%), Gaps = 10/121 (8%) Query: 33 NEAQLAHFRRILEAWRNQLRDEVDRTVT--------HMQDEAANFPDPVDRAAQEEEFSL 84 + A+ R L A R++LR E D+T++ + D A + E E + Sbjct: 21 SAAETEKIRAALAARRDELRAEYDQTLSEITELQRDRLTDSAGDDQADTGTKTFEREQEI 80 Query: 85 ELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAEI 144 L N ER I ++E+ L+++++ +G+CE CG I + RL A P+A LC+ CK LAE Sbjct: 81 SLANSILER--ITQVERALERLDEGGYGWCERCGNPIPVERLAAFPSATLCVTCKQLAER 138 Query: 145 R 145 R Sbjct: 139 R 139 >UniRef50_C6C0K2 Transcriptional regulator, TraR/DksA family n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6C0K2_DESAD Length = 116 Score = 60.8 bits (146), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 39/110 (35%), Positives = 62/110 (56%), Gaps = 6/110 (5%) Query: 32 MNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAA-NFPDPVDRAAQEEEFSLELRNRD 90 MN +Q R+ LE +L + ++RT +D A + D + A++ E + L Sbjct: 1 MNSSQRISIRQHLEL---KLAELIERTTA--RDTAVESCADDNEYASRISEQKINLALHV 55 Query: 91 RERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKT 140 RE KLI +E+TL +V++ DFG CE CG EI + R++A PT C+ C++ Sbjct: 56 RETKLIIDMEETLSRVDNWDFGICEDCGEEIALARIKANPTTRFCVSCQS 105 >UniRef50_D1UB56 Transcriptional regulator, TraR/DksA family n=1 Tax=Desulfovibrio aespoeensis Aspo-2 RepID=D1UB56_9DELT Length = 116 Score = 59.7 bits (143), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 30/76 (39%), Positives = 45/76 (59%) Query: 68 NFPDPVDRAAQEEEFSLELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLE 127 N PD D A Q + + L + R IK+ E +K++ + D+G C+ CG IG+ RL+ Sbjct: 33 NCPDETDFATQLAQQGVNLAMQRRRMARIKEYECAIKRLRETDYGTCDECGDPIGLARLK 92 Query: 128 ARPTADLCIDCKTLAE 143 A P+A LCI C++ AE Sbjct: 93 ANPSARLCIVCQSAAE 108 >UniRef50_C0QFB9 DksA1 n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QFB9_DESAH Length = 177 Score = 59.3 bits (142), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 38/125 (30%), Positives = 63/125 (50%), Gaps = 4/125 (3%) Query: 20 VEPYQEKPGEEYMNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQD-EAANFPDPVDRAAQ 78 VE Y E YMN+ QL +FR E +L D T H ++ DP D + Sbjct: 6 VEHYTPSDKEVYMNQRQLQYFR---ERLLMELEDLNMVTAHHRAGVQSIGTSDPGDLSFF 62 Query: 79 EEEFSLELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDC 138 E + +++L + K +K++ L+++++ +FGYC G IG+ RLE P A L ++ Sbjct: 63 ETKMAMQLTKLNHYHKKLKQVMLALERIDEGNFGYCLLSGNRIGLNRLEVLPWATLAVET 122 Query: 139 KTLAE 143 + + E Sbjct: 123 QEMLE 127 >UniRef50_B8DQJ2 Transcriptional regulator, TraR/DksA family n=1 Tax=Desulfovibrio vulgaris str. 'Miyazaki F' RepID=B8DQJ2_DESVM Length = 142 Score = 58.9 bits (141), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 38/113 (33%), Positives = 59/113 (52%), Gaps = 9/113 (7%) Query: 29 EEYMNEAQLAHFRRILEAWRNQLRDE--VDRTVTHMQDEAANFPDPVDRAAQEEEFSLEL 86 E M + A RR LEA LR + V+ V DE + A++ E +L + Sbjct: 17 ERAMTDRHHAEIRRRLEAELTHLRRQLLVEGGVEACADEN-------EFASRVSELTLSM 69 Query: 87 RNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCK 139 DR + I++IE L+ ++ D+G C++CG +I + RL ARPT LC+ C+ Sbjct: 70 TLLDRAGRRIREIEGVLRAMDSRDYGVCDACGDDIPLPRLLARPTTRLCVHCQ 122 >UniRef50_C7QCE7 Transcriptional regulator, TraR/DksA family n=1 Tax=Catenulispora acidiphila DSM 44928 RepID=C7QCE7_CATAD Length = 275 Score = 58.5 bits (140), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 38/135 (28%), Positives = 66/135 (48%), Gaps = 9/135 (6%) Query: 11 SLSILAIAGVEPYQEKPGEEYMNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQD------ 64 S ++ + G+ PY+ GE+ ++ + LE +LR E+ T + D Sbjct: 138 SQTMAGVGGLPPYRT--GEDPWTPEEVGELQAELEGDAARLRREISTAETGIADLLRDSG 195 Query: 65 EAANFPDPVDRAAQEEEFSLELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIR 124 E A D D + E E+ + R+++++ E+ L ++ + +G CESCG +G Sbjct: 196 EGAGD-DQADAGTKNFEREHEMAIANNAREMLQQTERALARLAADTYGVCESCGEPVGKY 254 Query: 125 RLEARPTADLCIDCK 139 RL+A P A LC+ CK Sbjct: 255 RLQAFPRATLCMSCK 269 >UniRef50_Q30RD2 Transcriptional regulators, TraR/DksA family n=3 Tax=Epsilonproteobacteria RepID=Q30RD2_SULDN Length = 116 Score = 58.2 bits (139), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 35/114 (30%), Positives = 60/114 (52%), Gaps = 3/114 (2%) Query: 32 MNEAQLAHFRRILEAWRNQLRDEVDRTVTH--MQDEAANFPDPVDRAAQEEEFSLELRNR 89 M E++L +F+ ILE+ + Q+ + R V Q + D D A+ + +E Sbjct: 1 MQESELKYFKEILESRKEQIIKNI-RGVNEELSQLSSLELKDEGDHASVDNSSMIESAIV 59 Query: 90 DRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAE 143 ++ + +++I TL K+ D+G CE C IG +RL+ +P A CIDC+ + E Sbjct: 60 HQQEQELREINVTLGKIATGDYGICEMCEDPIGFQRLKVKPHAIYCIDCREIVE 113 >UniRef50_A0LMB8 Transcriptional regulator, TraR/DksA family n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LMB8_SYNFM Length = 122 Score = 57.8 bits (138), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 36/115 (31%), Positives = 57/115 (49%), Gaps = 10/115 (8%) Query: 31 YMNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAANFPDPVDRAA--QEEEFSLELRN 88 Y ++ + + A R +L H + D VDR + E+EF L + Sbjct: 8 YFHDILIKRLMEVFPAMRGRLLKMAGMGTVH------DPMDEVDRTSIRTEQEFLLHMHC 61 Query: 89 RDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAE 143 R+ +L+++I L+++ DFG CE CG +I + RL+A P+A CI CK AE Sbjct: 62 RNE--RLVQEILNGLQRIRTGDFGVCEECGKDIELNRLKAHPSATQCIKCKKAAE 114 >UniRef50_Q2BN62 DnaK suppressor protein, putative n=1 Tax=Neptuniibacter caesariensis RepID=Q2BN62_9GAMM Length = 122 Score = 57.8 bits (138), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 34/113 (30%), Positives = 64/113 (56%), Gaps = 6/113 (5%) Query: 31 YMNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQ----DEAANFPDPVDRAAQEEEFSLEL 86 +++E ++ L + R++L +E+D Q D+ A V R ++ S+ Sbjct: 4 FIDEIEVESLLEKLHSLRHELDEEIDSLQKESQPVQLDQQAF--GRVSRGEALQQQSMAK 61 Query: 87 RNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCK 139 N + ++ I++I++ L+K++ ED+GYC++CG I + RL ARP + LCI C+ Sbjct: 62 ANLAQCQERIRQIDEALQKIDAEDYGYCDACGERIALARLNARPESPLCISCQ 114 >UniRef50_A1SL71 Zinc finger, DksA/TraR C4-type n=4 Tax=Actinomycetales RepID=A1SL71_NOCSJ Length = 283 Score = 57.4 bits (137), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 38/101 (37%), Positives = 51/101 (50%), Gaps = 6/101 (5%) Query: 39 HFRRILEAWRNQLRDEVDRTVTHMQDEAANFPDPVDRAAQEEEFSLELRNRDRERKLIKK 98 H +RI+EA +L D + D A D D A E EL + ER + + Sbjct: 183 HSQRIIEAQEAEL----DGLMRDSGDGAGQ--DQADLGATSFERDHELTVLNSERDKLAQ 236 Query: 99 IEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCK 139 IE+ L +++D +G CESCG IG RL A P A LC+ CK Sbjct: 237 IERALARIDDGTYGVCESCGNPIGKMRLMAFPRATLCMTCK 277 >UniRef50_Q30V43 Transcriptional regulators, TraR/DksA family n=1 Tax=Desulfovibrio desulfuricans subsp. desulfuricans str. G20 RepID=Q30V43_DESDG Length = 149 Score = 57.0 bits (136), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 27/70 (38%), Positives = 41/70 (58%) Query: 70 PDPVDRAAQEEEFSLELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEAR 129 PD ++A++ E +L++ R R + + +E L ++ FG CE CG EIG RL+A Sbjct: 61 PDENEQASRLAELTLDVALRGRLARQLAAVESALHRIATGGFGRCEECGDEIGEARLKAN 120 Query: 130 PTADLCIDCK 139 PT LCI C+ Sbjct: 121 PTTTLCIHCQ 130 >UniRef50_Q021M5 Transcriptional regulator, TraR/DksA family n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q021M5_SOLUE Length = 143 Score = 56.2 bits (134), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 36/125 (28%), Positives = 60/125 (48%), Gaps = 9/125 (7%) Query: 32 MNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAA-NFPDPVDRAAQEEEFSLELRNRD 90 M +L HFR +L A + D + T+ + D A N D +DR E + +R + Sbjct: 19 MTRTELKHFRSVLHA----MLDGTEDTLRTLDDIAIQNVADSLDRIQHATEREMAIRRIE 74 Query: 91 RERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAEIRE---- 146 + ++ + L+++ + +G C C EI +RL+A P C+DC+ A+ R Sbjct: 75 LDFSKVQSVRSALQRIAEGTYGVCSECDNEIPGKRLKAVPWTPYCLDCQDSADRRRWLSG 134 Query: 147 KQMAG 151 QMAG Sbjct: 135 AQMAG 139 >UniRef50_C3XG00 DnaK suppressor protein n=1 Tax=Helicobacter bilis ATCC 43879 RepID=C3XG00_9HELI Length = 122 Score = 55.5 bits (132), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 27/59 (45%), Positives = 39/59 (66%) Query: 90 DRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAEIREKQ 148 +R +K +K+I +L K +D +G CE C EIGI RL+A+P A CI+C+ + E EKQ Sbjct: 60 ERNQKEMKEISASLAKFDDGIYGICEMCEDEIGIERLQAKPHARFCINCREIYEKSEKQ 118 >UniRef50_A0LGY5 Transcriptional regulator, TraR/DksA family n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LGY5_SYNFM Length = 257 Score = 55.5 bits (132), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 34/109 (31%), Positives = 59/109 (54%), Gaps = 5/109 (4%) Query: 32 MNEAQLAHFRRILEAWRNQLRDEVDR--TVTHMQDEAANFPDPVDRAAQEEEFSLELRNR 89 M++ + + R +L R ++ D V+R V + A + +A+ E + NR Sbjct: 1 MDKRDILYLRNMLIVRRKEISDRVNRLAAVWKGVEPAIELEEEAQKASITEPYQRLDANR 60 Query: 90 DRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDC 138 +E +++I+ L K+ ++G CESCG +I ++RLEA P A LC+DC Sbjct: 61 KKE---VEQIDLALGKIAIGEYGICESCGDDIALKRLEAIPWARLCVDC 106 >UniRef50_Q2RK56 Transcriptional regulators, TraR/DksA family n=1 Tax=Moorella thermoacetica ATCC 39073 RepID=Q2RK56_MOOTA Length = 251 Score = 55.1 bits (131), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 36/117 (30%), Positives = 59/117 (50%), Gaps = 9/117 (7%) Query: 32 MNEAQLAHFRRILEAWRNQLRDEVDR--------TVTHMQDEAANFPD-PVDRAAQEEEF 82 M+ LAHFR+ L + L +++D ++ E + + + P D +E E Sbjct: 1 MDRQSLAHFRQKLLEEKAGLEEQLDSLNSGGLGESLLESTQELSRYDNHPGDLGTEEFER 60 Query: 83 SLELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCK 139 +L RD + ++KIE L+ + + +GYC CG EI RLEA P LC++C+ Sbjct: 61 GKDLALRDNVQVQLRKIEDALQSIAEGTYGYCRRCGREIPRERLEAIPETTLCLECR 117 >UniRef50_Q7VGT4 DnaK suppressor protein DskA n=2 Tax=Helicobacter RepID=Q7VGT4_HELHP Length = 118 Score = 55.1 bits (131), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 35/110 (31%), Positives = 58/110 (52%), Gaps = 1/110 (0%) Query: 40 FRRILEAWRNQLRDEVDRTVTHMQD-EAANFPDPVDRAAQEEEFSLELRNRDRERKLIKK 98 F +L ++L D +D T +++ + A+ D D + +LE+ D + IK Sbjct: 7 FEILLNERLSKLCDNIDSKNTRIKNIQDAHHKDEGDIVGAGLQGNLEMGMIDLYKDEIKD 66 Query: 99 IEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAEIREKQ 148 I L+K++D FG CE C EI + RL+ +P A CI+C+ L E +K+ Sbjct: 67 IRNALQKIKDGTFGVCEMCDDEIDVERLKVKPHAKYCINCRELFEQTQKK 116 >UniRef50_C5EYJ0 DnaK suppressor protein n=4 Tax=Helicobacter RepID=C5EYJ0_9HELI Length = 119 Score = 55.1 bits (131), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 36/120 (30%), Positives = 62/120 (51%), Gaps = 3/120 (2%) Query: 32 MNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAANFPDPVDRAAQEEEFSLELRNRDR 91 M + ++ ++ILE + + D M++ D D AA + +L+ + Sbjct: 1 MQQTEIEALKKILETKKKAILDNNFDHQKSMENLRGISLDEADEAAMSMKNTLDGLIFEH 60 Query: 92 ERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAEIREKQMAG 151 K ++ IE+ L+K+E+ ++G CE C I I+RL+A+P A CI C+ EI EK + G Sbjct: 61 HHKELEYIERALEKIENGEYGICEMCDEPISIQRLKAKPHARFCIICR---EIVEKDLKG 117 >UniRef50_Q9S2X6 Putative DNA-binding protein n=2 Tax=Streptomyces RepID=Q9S2X6_STRCO Length = 239 Score = 55.1 bits (131), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 35/123 (28%), Positives = 63/123 (51%), Gaps = 13/123 (10%) Query: 26 KPGEEYMNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAANFPDPVDRAAQEEEFSLE 85 +PGEE ++ R L++ ++LR E+D + +Q + D A ++E Sbjct: 114 RPGEEPWTPQEVEEARGELQSEADRLRTEIDTSERSLQGMMRDSGD----GAGDDEADTG 169 Query: 86 LRNRDRE---------RKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCI 136 +N RE R+++ + E+ L +++ +G CE+CG IG R++A P A LC+ Sbjct: 170 SKNITREHELALAATAREVLSQTERALDRLDAGTYGLCENCGNPIGKARMQAFPRATLCV 229 Query: 137 DCK 139 +CK Sbjct: 230 ECK 232 >UniRef50_B5GH83 DNA-binding protein n=1 Tax=Streptomyces sp. SPB74 RepID=B5GH83_9ACTO Length = 232 Score = 54.7 bits (130), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 43/130 (33%), Positives = 64/130 (49%), Gaps = 15/130 (11%) Query: 26 KPGEEYMNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAANFPDPVDRAAQEE----- 80 +PGE+ + A R+ LE LR E++ T D A+ D D A +E Sbjct: 108 RPGEDPWTAEEAAEARQGLEQEIAGLRAELE---TAEADLASLMRDSADGAGDDEADTGT 164 Query: 81 -----EFSLELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLC 135 E L L RER +++ E+ L +++ +G CE+CG IG R++A P A LC Sbjct: 165 KNVTREHELALAAGSRER--LEQTERALLRMDAGTYGVCENCGKPIGKARMQAFPHAILC 222 Query: 136 IDCKTLAEIR 145 +DCK +E R Sbjct: 223 VDCKQKSERR 232 >UniRef50_C7LTL7 Transcriptional regulator, TraR/DksA family n=1 Tax=Desulfomicrobium baculatum DSM 4028 RepID=C7LTL7_DESBD Length = 133 Score = 54.3 bits (129), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 26/74 (35%), Positives = 40/74 (54%) Query: 70 PDPVDRAAQEEEFSLELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEAR 129 PD D+A + +R KL+K I LK ++++ +G CE CG I RRL A Sbjct: 41 PDLADQACSASSRDWNVIRYNRNVKLLKDITVALKAIDNDSYGICEMCGEHIADRRLLAI 100 Query: 130 PTADLCIDCKTLAE 143 P+A CI+C+ + + Sbjct: 101 PSALFCIECQEMID 114 >UniRef50_Q2GEN7 DnaK suppressor protein n=2 Tax=Neorickettsia RepID=Q2GEN7_NEOSM Length = 137 Score = 54.3 bits (129), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 37/112 (33%), Positives = 58/112 (51%), Gaps = 15/112 (13%) Query: 30 EYMNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAANF--PDPVDRAAQEEEFSLELR 87 EYM E LA+F L RN + ++ + V + + AN D + +AQ+ R Sbjct: 18 EYMGERMLAYFHEKLIGLRNAIVNQ-GKVVKDVLSKCANSYEADDIIMSAQK-------R 69 Query: 88 NRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCK 139 N L+ +I++ L+++E +GYCE G EIG RL+ PTA C+D + Sbjct: 70 N-----SLLSEIDEALERMEQGVYGYCEETGDEIGFGRLDLEPTARYCVDVQ 116 >UniRef50_A4XKS6 Transcriptional regulator, TraR/DksA family n=2 Tax=Clostridia RepID=A4XKS6_CALS8 Length = 209 Score = 53.9 bits (128), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 39/102 (38%), Positives = 57/102 (55%), Gaps = 5/102 (4%) Query: 48 RNQLRDEVDRTVTHMQDEAANFPD-PVDRAAQ--EEEFSLELRNRDRERKLIKKIEKTLK 104 +N ++V T +E +N+ + P D A+ E E ++ L+ D +RKL + IEK L Sbjct: 25 KNTKENQVASFSTLYSNEVSNYDNHPADIASDLFEVEKNMGLK-ADMKRKL-ELIEKALS 82 Query: 105 KVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAEIRE 146 K+E +FGYC SC EI RL A P + CI+C+ E RE Sbjct: 83 KIEKGNFGYCISCKKEIPFDRLLAIPYTEFCIECQKDMEKRE 124 >UniRef50_Q01U65 Transcriptional regulator, TraR/DksA family n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q01U65_SOLUE Length = 129 Score = 53.5 bits (127), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 35/116 (30%), Positives = 58/116 (50%), Gaps = 5/116 (4%) Query: 32 MNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAA-NFPDPVDRAAQEEEFSLELRNRD 90 M + +L ++ +LEA + +L + + +D A PD +D E L +RN D Sbjct: 1 MTQTELNKYKAMLEAKQAEL----SAGLRNREDIAIEKTPDAIDEVQLAGERELAIRNLD 56 Query: 91 RERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAEIRE 146 RE L++ ++ L +V D +G C C +I +RL+A P CI C+ A+ E Sbjct: 57 RESNLLRNVKGALVRVADGSYGVCMHCEEDIKPKRLDAVPWTKYCIKCQEAADRHE 112 >UniRef50_A1HSA8 Transcriptional regulator, TraR/DksA family n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HSA8_9FIRM Length = 227 Score = 53.5 bits (127), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 28/67 (41%), Positives = 40/67 (59%) Query: 72 PVDRAAQEEEFSLELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPT 131 P D + E S +L RD L++++E L+KV ++G C++CG EIGI RL+A P Sbjct: 50 PADIGDELFERSKDLALRDNAHLLLEQVEHALEKVAAGNYGICDNCGREIGIERLQAIPY 109 Query: 132 ADLCIDC 138 A CI C Sbjct: 110 AARCIVC 116 >UniRef50_A1VFA5 Transcriptional regulator, TraR/DksA family n=3 Tax=Desulfovibrio vulgaris RepID=A1VFA5_DESVV Length = 118 Score = 53.1 bits (126), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 34/105 (32%), Positives = 57/105 (54%), Gaps = 6/105 (5%) Query: 48 RNQLRDEVDRTVTHMQDEAANFPDPVDRAAQEEEFSL--ELRNRDRERKLIKKIEKTLKK 105 R LR ++D+T + + +N VD + FS+ + N ++ + ++ + L + Sbjct: 16 RAHLRKDIDQTEAAI-NAMSNDILTVDDVEHRQVFSMAEQRANIEQLKGRLRSLRTALAR 74 Query: 106 VEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAEIREKQMA 150 +DE+FG+C+ CG IG++RL + PT LCI C A RE Q A Sbjct: 75 TDDEEFGWCDECGDAIGVQRLLSVPTTRLCIAC---ARRREDQFA 116 >UniRef50_Q6MGP9 DksA protein n=1 Tax=Bdellovibrio bacteriovorus RepID=Q6MGP9_BDEBA Length = 126 Score = 53.1 bits (126), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 23/56 (41%), Positives = 33/56 (58%) Query: 83 SLELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDC 138 ++ + +R+R + IE+ L K+ D +G CESC I RRL+ RP LCIDC Sbjct: 59 NISIHLHERDRTALYAIERALGKIADGTYGQCESCSEIINARRLQVRPFTALCIDC 114 >UniRef50_C7LT72 Transcriptional regulator, TraR/DksA family n=1 Tax=Desulfomicrobium baculatum DSM 4028 RepID=C7LT72_DESBD Length = 110 Score = 52.4 bits (124), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 26/91 (28%), Positives = 50/91 (54%), Gaps = 5/91 (5%) Query: 53 DEVDRTVTHMQDEA--ANFPDPVDRAAQEEEFSLELRNRDR---ERKLIKKIEKTLKKVE 107 +E+ T+ +Q+ + + P+ R ++ + + + + R R+ + ++E+ L +V+ Sbjct: 18 EELKTTIAQLQETSKPVSLDQPIGRLSRMDSMANQAISEQRLTDSRRTLMRLERALDRVD 77 Query: 108 DEDFGYCESCGVEIGIRRLEARPTADLCIDC 138 DE FG C CG +I + RL P A LC+DC Sbjct: 78 DEHFGVCAECGEDIAVGRLLVMPEATLCVDC 108 >UniRef50_C1DXT7 Transcriptional regulator, TraR/DksA family n=5 Tax=Aquificales RepID=C1DXT7_SULAA Length = 144 Score = 52.4 bits (124), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 34/108 (31%), Positives = 48/108 (44%) Query: 37 LAHFRRILEAWRNQLRDEVDRTVTHMQDEAANFPDPVDRAAQEEEFSLELRNRDRERKLI 96 L R L RNQ+ ++ + +E D D E R +R+ + Sbjct: 3 LETIREKLLEKRNQILKSLEESAKSDINEKTGVGDDADTVTDELSRETHYRLTQADRETL 62 Query: 97 KKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAEI 144 I+ L+K++ +G CE CG IG +RLEA P LCIDC EI Sbjct: 63 YLIDLALRKIDSGIYGICEECGAVIGEKRLEAIPWVRLCIDCSQNEEI 110 >UniRef50_A4BMT6 Putative uncharacterized protein n=1 Tax=Nitrococcus mobilis Nb-231 RepID=A4BMT6_9GAMM Length = 132 Score = 52.4 bits (124), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 26/75 (34%), Positives = 38/75 (50%) Query: 66 AANFPDPVDRAAQEEEFSLELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRR 125 A PD D + + L + DR + I++IE L+K+ D +GYC CG I +R Sbjct: 44 ADKVPDVGDASVADLLVDLNIAEIDRHVREIQRIEAALRKLADGSYGYCMDCGEAIAAQR 103 Query: 126 LEARPTADLCIDCKT 140 L+A P C C+T Sbjct: 104 LQANPAVARCYACQT 118 >UniRef50_Q2BI57 Zn-finger, prokaryotic DksA/TraR C4 type n=1 Tax=Neptuniibacter caesariensis RepID=Q2BI57_9GAMM Length = 123 Score = 52.4 bits (124), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 38/119 (31%), Positives = 60/119 (50%), Gaps = 7/119 (5%) Query: 32 MNEAQLAHFRRILEAWRNQLRDEVDRTV---THMQDEAANFPDPVDRAAQEEEFSLELRN 88 +N +++A F+ L+ QLR E T QD + D + A + + + N Sbjct: 4 LNLSEIAAFKAELKDLLEQLRAEAGEEYSEQTKQQD--LHVHDSGEEAEAVVDLMMHVEN 61 Query: 89 RDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTL--AEIR 145 R + I LK++++ DFG+C CG EI + RL A PTA CI C+++ AE+R Sbjct: 62 LARHDEEIADCLAALKRIDEGDFGFCLDCGEEIELSRLRACPTASRCIRCQSVLEAEVR 120 >UniRef50_B8DLC7 Transcriptional regulator, TraR/DksA family n=1 Tax=Desulfovibrio vulgaris str. 'Miyazaki F' RepID=B8DLC7_DESVM Length = 119 Score = 52.4 bits (124), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 39/117 (33%), Positives = 57/117 (48%), Gaps = 4/117 (3%) Query: 32 MNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAANFPDPVDRAAQEEEFSLELRNRDR 91 M E +A RR L+ LR+ +DR E A+ P+ + S + R R Sbjct: 1 MREETIAVVRRRLKQEIRDLREALDRWRGLQGVEDASDPERMPDVEGMTYRSWKQRTETR 60 Query: 92 ERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAEIREKQ 148 ++ + TL++++DEDFGYC+ CG EI RL A PT C+ C + E R Q Sbjct: 61 ----LQVLRATLERLDDEDFGYCDDCGNEIPAARLLAVPTTTRCVHCMSAREERGAQ 113 >UniRef50_A4V7S0 Putative transcriptional regulator DnaK suppressor protein homolog n=1 Tax=Pseudomonas fluorescens SBW25 RepID=A4V7S0_PSEFS Length = 138 Score = 52.4 bits (124), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 35/119 (29%), Positives = 61/119 (51%), Gaps = 9/119 (7%) Query: 26 KPGEEYMNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAANFPDPV----DRAAQEEE 81 +P + YM+ QL F+++L + +++L R V H +EA + + V D EE Sbjct: 11 QPTDNYMDSVQLQFFKQLLLSKQSEL---TARIVGH--EEAVSVTEKVADSSDAGTIEEN 65 Query: 82 FSLELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKT 140 L +R ER I+ L ++E++ +G+C+ G IG++RL PTA + +T Sbjct: 66 RGLLMRILKGERAEAMAIKAALVRIEEDAYGWCDDSGEPIGLKRLLNNPTASRTTEAQT 124 >UniRef50_D1CBT8 Transcriptional regulator, TraR/DksA family n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=D1CBT8_THET1 Length = 126 Score = 52.0 bits (123), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 34/90 (37%), Positives = 47/90 (52%), Gaps = 10/90 (11%) Query: 47 WRNQLRDEVDRTVTHMQDEAANFPDPVDRAAQEEEFSLELRNRDRERKLIKKIEKTLKKV 106 W +RDE HM DE D QE+E +L+ RN R ++ +IE LK++ Sbjct: 36 WGESVRDEDSSYGNHMADEG------TDTFEQEKEIALQ-RNL---RSVLNEIEAALKRM 85 Query: 107 EDEDFGYCESCGVEIGIRRLEARPTADLCI 136 ++ +G C CG EI I RL ARP A C+ Sbjct: 86 DEGTYGICIDCGQEIPIERLMARPYAVRCV 115 >UniRef50_D0LJW3 Transcriptional regulator, TraR/DksA family n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LJW3_HALO1 Length = 142 Score = 52.0 bits (123), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 27/89 (30%), Positives = 50/89 (56%), Gaps = 1/89 (1%) Query: 51 LRDEVDRTVTHMQDEAANFPDPVDRAAQEEEFSLELRNRDRERKLIKKIEKTLKKVEDED 110 L +E+ R ++ EA PD D+A+Q + LR D++ K ++++ + L+K++ + Sbjct: 45 LAEEIRRHISEA-TEAERHPDEGDQASQNANQAYLLRYADKQNKQLQQVRRALQKLQTGE 103 Query: 111 FGYCESCGVEIGIRRLEARPTADLCIDCK 139 +G CE G IG++RL RP ++ K Sbjct: 104 YGVCEGSGEPIGVQRLMLRPWTRYSVEYK 132 >UniRef50_A3DD29 Transcriptional regulators, TraR/DksA family n=5 Tax=Clostridium RepID=A3DD29_CLOTH Length = 212 Score = 51.6 bits (122), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 41/128 (32%), Positives = 64/128 (50%), Gaps = 23/128 (17%) Query: 32 MNEAQLAHFRRIL-EAWRNQLRDEVDRTVTHMQ------------DEAANFPD-PVDRAA 77 M++++ FR++L E +N ++RT+ M+ DE + + + P + Sbjct: 1 MDDSKKEFFRQLLVEEKKN-----IERTINLMEEHGISKQNVESADELSGYDNHPAELGT 55 Query: 78 QEEEFSLELRN--RDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLC 135 Q F EL N + E +L++ I + L K++ FG CE CG EI RLEA P LC Sbjct: 56 QL--FQTELNNALKVHEERLLEDINEALTKMDKGSFGKCELCGKEIDEERLEALPYTRLC 113 Query: 136 IDCKTLAE 143 IDC+ E Sbjct: 114 IDCENAKE 121 >UniRef50_A1VXK8 DnaK suppressor protein, putative n=15 Tax=Campylobacter RepID=A1VXK8_CAMJJ Length = 120 Score = 51.6 bits (122), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 30/113 (26%), Positives = 59/113 (52%), Gaps = 1/113 (0%) Query: 32 MNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAANFP-DPVDRAAQEEEFSLELRNRD 90 M + ++ +F+ ILE + + + + ++ + P D VD + E ++ Sbjct: 1 MKKNEIQNFKNILEERKKAILENLQSNSNEIEALHNSVPSDSVDFSVIETGSQIDFAIST 60 Query: 91 RERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAE 143 ++ + +IE +L K+++ +G CESC EI +RL+ +P A CI C+ +AE Sbjct: 61 NLKEELIEIEDSLDKIKNGTYGICESCDDEIDSQRLKVKPHARYCITCRQIAE 113 >UniRef50_B2V854 Transcriptional regulator, TraR/DksA family n=4 Tax=Hydrogenothermaceae RepID=B2V854_SULSY Length = 147 Score = 51.6 bits (122), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 34/111 (30%), Positives = 60/111 (54%), Gaps = 9/111 (8%) Query: 32 MNEAQLAHFRRILEAWRNQL------RDEVDRTVTHMQDEAANFPDPVDRAAQEEEFSLE 85 M++ +L FRR+L R+Q+ ++E ++ +T E + + + EE + Sbjct: 1 MDKNKLQKFRRLLLKKRSQILERYLKKEETEKVLTEQSAEPRDLEEYANIDITEEILA-- 58 Query: 86 LRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCI 136 + D E +++K I+ TL+++++ +G CE CG EI RLEA P LCI Sbjct: 59 -QLSDVEIEILKAIDDTLERIQNGTYGICEVCGKEIEEERLEAVPWTTLCI 108 >UniRef50_C0GJQ4 Transcriptional regulator, TraR/DksA family n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GJQ4_9FIRM Length = 203 Score = 51.2 bits (121), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 22/72 (30%), Positives = 45/72 (62%) Query: 72 PVDRAAQEEEFSLELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPT 131 P D ++ E + ++ ++ + ++ K+E+ L+K++++ +G CE+CG I RL+A P Sbjct: 49 PADVGSENYERAKDISLHEKNQMVLDKVEEALEKLDNDIYGMCENCGKPIPEERLDALPY 108 Query: 132 ADLCIDCKTLAE 143 A+ C+ CK +E Sbjct: 109 AEFCVQCKKKSE 120 >UniRef50_A0RMM0 Transcriptional regulators, TraR/DksA family n=9 Tax=Campylobacterales RepID=A0RMM0_CAMFF Length = 122 Score = 51.2 bits (121), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 33/122 (27%), Positives = 59/122 (48%), Gaps = 9/122 (7%) Query: 32 MNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAANF-----PDPVDRAAQEEEFSLEL 86 M ++ L F+ +LE + Q +++ + DE D D A+ + LE Sbjct: 1 MRQSDLEFFKNLLEERKIQ----INKNILDAADEINGLRQSGASDEFDFASINADAILEH 56 Query: 87 RNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAEIRE 146 ++R + +I+++LKK+ + +G C+ C EI I RL+ +P A CI C+ + E Sbjct: 57 SISAKQRSELNEIDESLKKIANRTYGICDMCEDEIDIERLKVKPNAKYCITCREIIEKNN 116 Query: 147 KQ 148 K Sbjct: 117 KN 118 >UniRef50_B8FT18 Transcriptional regulator, TraR/DksA family n=2 Tax=Desulfitobacterium hafniense RepID=B8FT18_DESHD Length = 222 Score = 51.2 bits (121), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 27/77 (35%), Positives = 41/77 (53%) Query: 72 PVDRAAQEEEFSLELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPT 131 P D A + E S ++ DR I+ I+ L++ E+ +G CE C EI + RLEA P Sbjct: 46 PADIATEVYERSRDVAIHDRLHHRIQAIDSALQRYEEGKYGLCEHCQKEIPLGRLEALPF 105 Query: 132 ADLCIDCKTLAEIREKQ 148 +C +C L E+ E+ Sbjct: 106 TTVCTECSRLEEMEEQH 122 >UniRef50_Q221D7 Transcriptional regulators, TraR/DksA family n=3 Tax=Comamonadaceae RepID=Q221D7_RHOFD Length = 124 Score = 50.8 bits (120), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 32/95 (33%), Positives = 47/95 (49%), Gaps = 9/95 (9%) Query: 50 QLRDEVDRTVTHMQDEAANFPDPVDRAAQEE-----EFSLELRNRDRERKLIKKIEKTLK 104 QL D TV + A +F D AQE EF+L+ R+ + + +++ L+ Sbjct: 23 QLSDLRGGTVGRAEASAEHFGQKEDSTAQESSARELEFALDARDSEE----LDRLDAALR 78 Query: 105 KVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCK 139 ++ED +G C CGV I RL A P A CI C+ Sbjct: 79 RIEDGSYGLCVDCGVGIPAARLHAAPDALRCIACQ 113 >UniRef50_A0LTP3 Transcriptional regulators, TraR/DksA family n=7 Tax=Actinomycetales RepID=A0LTP3_ACIC1 Length = 527 Score = 50.8 bits (120), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 25/62 (40%), Positives = 34/62 (54%), Gaps = 4/62 (6%) Query: 78 QEEEFSLELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCID 137 +E E SL RD L+ + E L ++ D +G CE+CG I RL+A P A LC+ Sbjct: 464 REHEMSLANNARD----LLVQTEHALARIADGTYGRCENCGNPINKLRLQANPRATLCVS 519 Query: 138 CK 139 CK Sbjct: 520 CK 521 >UniRef50_Q021L0 Transcriptional regulator, TraR/DksA family n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q021L0_SOLUE Length = 129 Score = 50.4 bits (119), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 29/113 (25%), Positives = 56/113 (49%), Gaps = 5/113 (4%) Query: 32 MNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAA-NFPDPVDRAAQEEEFSLELRNRD 90 M+ QL F+RI+E + + H +D + PD +D+ +L +R + Sbjct: 1 MDNIQLKEFKRIIEEHLASF----EHPLGHREDIVVESTPDTLDQVQNAAARALAIRQLE 56 Query: 91 RERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAE 143 + K ++ + L+++ED +G C+ C +I ++RL P A C+ C+ A+ Sbjct: 57 LDHKRMRGLRDALERIEDGSYGICQRCDEDISLKRLRVVPWASYCLRCQESAD 109 >UniRef50_A8EWK7 DnaK suppressor protein DksA n=1 Tax=Arcobacter butzleri RM4018 RepID=A8EWK7_ARCB4 Length = 123 Score = 50.4 bits (119), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 30/112 (26%), Positives = 59/112 (52%), Gaps = 1/112 (0%) Query: 33 NEAQLAHFRRILEAWRNQLRDEVDRTVTHM-QDEAANFPDPVDRAAQEEEFSLELRNRDR 91 N+ Q+ + IL + + V+ + ++ Q + + D +D A + +E + Sbjct: 3 NKTQIDELKAILLERKENILSHVNSSRENIDQLKEQDINDDLDYAELVSDSFIEGMITNH 62 Query: 92 ERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAE 143 + +K+IE+ LKK+ +G C+ CG+ I + RL+A+P A C +C+T+ E Sbjct: 63 QLDELKQIEEALKKITLGTYGICDMCGINIPLGRLKAKPFAKFCTECRTVYE 114 >UniRef50_B2A2J0 Transcriptional regulator, TraR/DksA family n=1 Tax=Natranaerobius thermophilus JW/NM-WN-LF RepID=B2A2J0_NATTJ Length = 216 Score = 50.1 bits (118), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 34/91 (37%), Positives = 46/91 (50%), Gaps = 7/91 (7%) Query: 48 RNQLRDEVDRTVTHMQDEAANFPDPVDRAAQEEEFSLELRNRDRERKLIKKIEKTLKKVE 107 R +RD V ++ N P + E E L N RE+KL ++IE L+K+ Sbjct: 32 RTSIRDNVSELSSY-----DNHPGDLGSEQYELEKDTTLSNL-REQKL-REIEIALEKIA 84 Query: 108 DEDFGYCESCGVEIGIRRLEARPTADLCIDC 138 + D+G CESCG EI RL+A P CI C Sbjct: 85 NGDYGKCESCGKEINNERLDAVPYTRYCISC 115 >UniRef50_D1C120 Transcriptional regulator, TraR/DksA family n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C120_SPHTD Length = 130 Score = 50.1 bits (118), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 29/73 (39%), Positives = 46/73 (63%), Gaps = 4/73 (5%) Query: 79 EEEFSLELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDC 138 E+E L +R+R +RK++ IE+ + K++ ++GYCE+C I RLEA P A CIDC Sbjct: 60 EQERLLSVRDRLADRKVL--IERAITKMDQGEYGYCENCKRPIPPDRLEALPFARYCIDC 117 Query: 139 KTLAEIREKQMAG 151 + A++ +Q G Sbjct: 118 Q--ADMDRRQGGG 128 >UniRef50_C0R4V6 DnaK suppressor protein, putative n=6 Tax=Wolbachia RepID=C0R4V6_WOLWR Length = 130 Score = 50.1 bits (118), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 39/124 (31%), Positives = 63/124 (50%), Gaps = 19/124 (15%) Query: 17 IAGVEPYQEKPGEEYMNEAQLAHFRRILEAWRNQLRDEV--DRTV-THMQDEAANFPDPV 73 I E Y EEYM+ QL +F L++ +L + D ++ T+ DE + Sbjct: 7 IKSPEDYNPSEDEEYMSVKQLEYFSLKLQSILAELEKQELEDNSIDTYYSDEDSG----- 61 Query: 74 DRAAQEEEFSLELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTAD 133 + EL R ++RK +KI++ L+K++ +GYC+ G EIG+ RL+A P A Sbjct: 62 ---------NEELIKRRKDRK--EKIKEALEKIKLGTYGYCDGTGEEIGVERLKANPLAI 110 Query: 134 LCID 137 CI+ Sbjct: 111 YCIE 114 >UniRef50_A6WCW5 Transcriptional regulator, TraR/DksA family n=10 Tax=Actinomycetales RepID=A6WCW5_KINRD Length = 159 Score = 49.7 bits (117), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 33/120 (27%), Positives = 56/120 (46%), Gaps = 19/120 (15%) Query: 45 EAW--------RNQLRDEVDRTVTHMQDEAANFP-----------DPVDRAAQEEEFSLE 85 EAW R +L+ E+DR + + +++F D VD A E Sbjct: 40 EAWTPAELDEVRVELQLEIDRLSAELAEASSSFSALVRSGEGAGDDQVDHGATTAGREHE 99 Query: 86 LRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAEIR 145 + + R+L+++ ++ L ++ +G CESC +G RL+A P LC+ CK+ E R Sbjct: 100 MTIVNNARELLEQTQRALVRLGSGVYGVCESCDGPVGKARLQAFPRVTLCVRCKSRGERR 159 >UniRef50_A9G9K0 Putative dnaK suppressor protein n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9G9K0_SORC5 Length = 167 Score = 49.3 bits (116), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 34/116 (29%), Positives = 56/116 (48%) Query: 36 QLAHFRRILEAWRNQLRDEVDRTVTHMQDEAANFPDPVDRAAQEEEFSLELRNRDRERKL 95 QL R+ LE R L +D +D + D +D A E SL + +R+ ++ Sbjct: 51 QLGELRQALEERRASLVANIDERQHAERDISREVGDEMDEANAEGATSLTSKLLERDVRV 110 Query: 96 IKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAEIREKQMAG 151 + +I++ L K+++ +G CE G IG RRL+ RP A + + E E+ G Sbjct: 111 LAEIDRALAKMKEGSYGMCEGTGEPIGYRRLKLRPWARYSVAYQEQIEREERTGGG 166 >UniRef50_Q1IJ15 Transcriptional regulators, TraR/DksA family n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1IJ15_ACIBL Length = 121 Score = 49.3 bits (116), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 31/109 (28%), Positives = 53/109 (48%), Gaps = 1/109 (0%) Query: 32 MNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAANFP-DPVDRAAQEEEFSLELRNRD 90 M++ ++ ++ LE R+ LR + +T ++ + D DRA Sbjct: 1 MDKKKIDAIKQQLEKRRDDLRATMVKTAADGREANEDTAQDIADRATNSYTKEFLFTQSA 60 Query: 91 RERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCK 139 +R L++ +E L ++ + +G C SCG EI +RLEA P A CI C+ Sbjct: 61 NDRNLLQMVEGALIRIGEGTYGECVSCGSEINSKRLEAVPWARYCIGCQ 109 >UniRef50_C0AYB0 Putative uncharacterized protein n=1 Tax=Proteus penneri ATCC 35198 RepID=C0AYB0_9ENTR Length = 40 Score = 49.3 bits (116), Expect = 4e-05, Method: Composition-based stats. Identities = 26/40 (65%), Positives = 30/40 (75%) Query: 1 MQEGQNRKTSSLSILAIAGVEPYQEKPGEEYMNEAQLAHF 40 MQEGQ RKTSS+SILAIAGVEPYQEK G + ++ F Sbjct: 1 MQEGQKRKTSSMSILAIAGVEPYQEKSGRRVHERSPISAF 40 >UniRef50_A4X6U9 Zinc finger, DksA/TraR C4-type n=4 Tax=Micromonosporaceae RepID=A4X6U9_SALTO Length = 132 Score = 49.3 bits (116), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 35/125 (28%), Positives = 63/125 (50%), Gaps = 13/125 (10%) Query: 34 EAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAANFPDPVDRAAQEEEFS-LELRNRDRE 92 +A+ R+ L+A ++L E ++ V +Q + + D A ++ S + RD Sbjct: 13 QAEADQIRQSLKARYDELAAEYEQAV--LQSQVLRLVEVGDTAGDDQADSGTKTAERDTA 70 Query: 93 RKLIKKI-------EKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAEIR 145 + L++ I E L ++E+ +G+CE CG I + RLE P+A C+ CK + R Sbjct: 71 QSLLRTILDRRAQFEHALTRLEEGTYGFCEGCGASIPVERLEIFPSATTCVTCK---QTR 127 Query: 146 EKQMA 150 E++ A Sbjct: 128 ERRAA 132 >UniRef50_B7S3A6 Putative uncharacterized protein n=1 Tax=marine gamma proteobacterium HTCC2148 RepID=B7S3A6_9GAMM Length = 112 Score = 49.3 bits (116), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 38/112 (33%), Positives = 57/112 (50%), Gaps = 8/112 (7%) Query: 32 MNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAANFPDPVDR-----AAQEEEFSLEL 86 M QL FR+ L A R Q D++++ D A V R A Q ++ + E Sbjct: 1 MKAHQLDVFRKALTA-RAQEIDQLNKDSKDAADTVALDQSKVGRLSRMDAMQAQQMAQET 59 Query: 87 RNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDC 138 R R+++L +KI+ L ++ED ++GYC +CG I I RL P + CI C Sbjct: 60 ARR-RQQQL-QKIKSALYRLEDGNYGYCFTCGDAIDIGRLNFDPASTRCIGC 109 >UniRef50_C8W4E4 Transcriptional regulator, TraR/DksA family n=1 Tax=Desulfotomaculum acetoxidans DSM 771 RepID=C8W4E4_DESAS Length = 231 Score = 48.9 bits (115), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 33/117 (28%), Positives = 54/117 (46%), Gaps = 9/117 (7%) Query: 32 MNEAQLAHFRRILEAWRNQLRDEVDR--------TVTHMQDEAANFPD-PVDRAAQEEEF 82 M+ ++ F+ L + +L D V +++ E + + + P D ++ E Sbjct: 1 MDRQKMQAFKETLLKEKKELEDSVHSFDERGLGISLSQATSELSTYDNHPADVGSEVFER 60 Query: 83 SLELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCK 139 S + RD I+ +E LK +E +G C+ CG EIG RL A P LC +CK Sbjct: 61 SKDFALRDDAMLKIRAVEDALKNIEMGKYGICDICGKEIGYARLTALPRTTLCKECK 117 >UniRef50_Q2GBE3 Transcriptional regulator, TraR/DksA family n=3 Tax=Alphaproteobacteria RepID=Q2GBE3_NOVAD Length = 104 Score = 48.5 bits (114), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 21/46 (45%), Positives = 29/46 (63%) Query: 93 RKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDC 138 R+ I +++ L+++ +G C CG EI RLEARP A LCIDC Sbjct: 54 RRQIASVDRALERIAAGTYGECIRCGGEIAPARLEARPEAALCIDC 99 >UniRef50_A9B2U1 Transcriptional regulator, TraR/DksA family n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9B2U1_HERA2 Length = 117 Score = 48.5 bits (114), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 37/116 (31%), Positives = 58/116 (50%), Gaps = 13/116 (11%) Query: 32 MNEAQLAHFRRILEAWRNQLRDEVDRT--VTHMQDEAANFP-------DPVDRAAQEEEF 82 +++AQL +F+ L N L +EV R T+ ++ A F D D +E+ F Sbjct: 3 LSKAQLGYFKERLHDMHNHLNEEVQRLEEATNQLNQDAEFGVSNHIADDASDIFEREKNF 62 Query: 83 SLELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDC 138 +L DR+R LI ++E L +++ +G C G +I I RLE P A L I+ Sbjct: 63 AL---IEDRQR-LIGEVEAALDRIDHGTYGICLKTGKQIPIERLEVLPYAALSIEA 114 >UniRef50_C6Q1P6 Transcriptional regulator, TraR/DksA family n=13 Tax=Clostridium RepID=C6Q1P6_9CLOT Length = 201 Score = 48.1 bits (113), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 37/121 (30%), Positives = 60/121 (49%), Gaps = 10/121 (8%) Query: 32 MNEAQLAHFRRILEAWRNQLRD-----EVDRTVTHMQDEAA--NFPD--PVDRAAQEEEF 82 MN +L HFR+ LE + ++ E + T+ + A +F D P D A + + Sbjct: 1 MNNERLEHFRKKLELEKKRVYSLLKQMEENETINSNAELATELSFYDNHPSDIATEIFDK 60 Query: 83 SLELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDC-KTL 141 + + E +IKKIE +L ++ +G C CG +I RLE P D C++C K+L Sbjct: 61 ERGIAFKGNELSIIKKIENSLSNIDKGTYGKCSICGKDIKEERLEFIPYTDHCVECQKSL 120 Query: 142 A 142 + Sbjct: 121 S 121 >UniRef50_B1H0G2 Putative dnaK suppressor n=1 Tax=uncultured Termite group 1 bacterium phylotype Rs-D17 RepID=B1H0G2_UNCTG Length = 119 Score = 48.1 bits (113), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 32/111 (28%), Positives = 54/111 (48%), Gaps = 5/111 (4%) Query: 32 MNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEA-ANFPDPVDRAAQ--EEEFSLELRN 88 MN+ LA ++IL + +++ + + D++ + D +D A+Q E+E EL Sbjct: 1 MNKKDLASLKKILIQKKMDFLNKMSKAQRGIYDDSNTSVGDEIDTASQNSEKEMYFELVA 60 Query: 89 RDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCK 139 D+ + I L K+E +G CE C I + RL+ P A CI C+ Sbjct: 61 SDKMT--LDAINDALVKIEKNAYGKCEGCSNNILLERLKVIPWAKYCIQCQ 109 >UniRef50_C9R7U4 Transcriptional regulator, TraR/DksA family n=1 Tax=Ammonifex degensii KC4 RepID=C9R7U4_AMMDK Length = 176 Score = 48.1 bits (113), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 25/51 (49%), Positives = 31/51 (60%), Gaps = 2/51 (3%) Query: 91 RERKLIK--KIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCK 139 RE L+K IE L+++E+ +GYCESCG I RLEA P LC CK Sbjct: 43 REDALLKLQVIEDALRRLEEGTYGYCESCGAPIPRERLEAVPYTTLCHACK 93 >UniRef50_Q48NH0 RNA polymerase-binding protein DksA n=2 Tax=Pseudomonas syringae group RepID=Q48NH0_PSE14 Length = 138 Score = 48.1 bits (113), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 33/116 (28%), Positives = 57/116 (49%), Gaps = 2/116 (1%) Query: 15 LAIAGVEPYQEKPGEEYMNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAANFPDPVD 74 +A+ V+ + +EYM+ QL F+ LE +LRD + + E PD D Sbjct: 1 MALMSVDQLLNQAEDEYMSVDQLVFFKDRLEVKAAELRDRL--LSCQVSCEIERHPDEAD 58 Query: 75 RAAQEEEFSLELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARP 130 A+ EE ++ +R+R+ + + K L+ + D+G+ + G IGI+RL P Sbjct: 59 FASDEENRAVAASMIERDRQTLSHVLKALEILALGDYGFFQETGEAIGIKRLLLVP 114 >UniRef50_A1K6D2 Conserved hypothetical DnaK suppressor protein n=2 Tax=Betaproteobacteria RepID=A1K6D2_AZOSB Length = 135 Score = 47.8 bits (112), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 31/118 (26%), Positives = 58/118 (49%), Gaps = 5/118 (4%) Query: 31 YMNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEA-ANFPDPVDRAAQEEEFSLELRNR 89 ++N+ ++A +L+ L+ V V+ + + P AA + E L + Sbjct: 3 HLNDDEIAALGALLDERERALKSGVHEHVSRLLEGGQPGLTTPAGDAADQAEVGLTREHE 62 Query: 90 D----RERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAE 143 + R+ + ++ IE +++ + + G C CG EI RLEA+PTA C+ C++L E Sbjct: 63 NLAVVRDVRELRDIEAARERIAEGEAGICVDCGEEIPFARLEAQPTATRCVRCQSLYE 120 >UniRef50_C5CLF2 Transcriptional regulator, TraR/DksA family n=1 Tax=Variovorax paradoxus S110 RepID=C5CLF2_VARPS Length = 130 Score = 47.8 bits (112), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 31/89 (34%), Positives = 46/89 (51%), Gaps = 9/89 (10%) Query: 53 DEVDRTVTHMQDEAANFPDPVDRAAQEEEFSLELRNRDRERKL--IKKIEKTLKKVEDED 110 DE H+Q PD VD A EE LR + ER + ++ IE +++ + Sbjct: 32 DEAPTRTPHVQ-----VPDTVD--AAEERLRGALRGAEVERDVSELRDIEAARERLRTGE 84 Query: 111 FGYCESCGVEIGIRRLEARPTADLCIDCK 139 FG C CGV+I + RLEA P + C++C+ Sbjct: 85 FGTCIDCGVQIPLDRLEAMPASARCLECQ 113 >UniRef50_B5YGE3 DnaK suppressor protein n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YGE3_THEYD Length = 129 Score = 47.8 bits (112), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 26/64 (40%), Positives = 38/64 (59%) Query: 84 LELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAE 143 + L+ R ++KKIE+ L+K+E+ +G CE CG EI RL+ P A C DC+ E Sbjct: 60 ISLKQLSTHRDILKKIEEALRKLEEGTYGICEMCGDEIPEERLKILPFAIYCRDCQEKIE 119 Query: 144 IREK 147 + EK Sbjct: 120 MIEK 123 >UniRef50_C7R8Q8 Transcriptional regulator, TraR/DksA family n=1 Tax=Kangiella koreensis DSM 16069 RepID=C7R8Q8_KANKD Length = 120 Score = 47.8 bits (112), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 19/54 (35%), Positives = 34/54 (62%) Query: 90 DRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAE 143 +R++K + + K LK++E+ +G+C C I +RLE P +LC+DC++ E Sbjct: 62 ERDKKRLVAVRKALKRIEEGQYGFCLECDEPISAKRLEVAPETELCLDCQSFKE 115 >UniRef50_A5UPY9 Transcriptional regulator, TraR/DksA family n=2 Tax=Roseiflexus RepID=A5UPY9_ROSS1 Length = 121 Score = 47.8 bits (112), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 19/52 (36%), Positives = 33/52 (63%) Query: 89 RDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKT 140 R R+L++++ L+++++ +G C CG I I RLEA P A LC+ C++ Sbjct: 62 RSNARELLEQVNAALRRLDEGTYGICADCGEPIPIERLEALPYATLCVRCQS 113 >UniRef50_C1I8K1 Putative uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=C1I8K1_9CLOT Length = 204 Score = 47.8 bits (112), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 34/120 (28%), Positives = 59/120 (49%), Gaps = 9/120 (7%) Query: 32 MNEAQLAHFRRILEAWRNQLRDEV----DRTVTHMQDEAAN---FPD--PVDRAAQEEEF 82 MN+ +L +++ L + ++ D + D VT E A+ F D P D A++ E Sbjct: 1 MNKEELTYYKNKLNQEKKRITDLINQLDDNGVTRFNAEVASELSFYDNHPSDIASETFEV 60 Query: 83 SLELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLA 142 ER L+ KI+ ++ +++ +G C+ CG EI RL+ P A CI+C+ + Sbjct: 61 EKGRALEANERALLDKIDDAVRAIDEGSYGKCQKCGKEIDKERLDFLPYALNCIECEDVV 120 >UniRef50_D1X2L9 Transcriptional regulator, TraR/DksA family n=5 Tax=Streptomyces RepID=D1X2L9_9ACTO Length = 248 Score = 47.4 bits (111), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 35/123 (28%), Positives = 61/123 (49%), Gaps = 13/123 (10%) Query: 26 KPGEEYMNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAANFPDPVDRAAQEEEFSLE 85 +PGE+ ++A R +L + +LR E++ + + A D D A ++E Sbjct: 123 RPGEDPWTPEEVAEARTLLTSETLRLRSELEASGAAL---AGLMRDSGD-GAGDDEADTG 178 Query: 86 LRNRDRERKL---------IKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCI 136 +N RE +L +++ E+ L ++E +G CE CG IG R++A P A LC+ Sbjct: 179 TKNITREHELSLAANAQEMLEQTERALARLEAGTYGLCEICGKPIGKARMQAFPRATLCV 238 Query: 137 DCK 139 + K Sbjct: 239 EDK 241 >UniRef50_C8WW56 Transcriptional regulator, TraR/DksA family n=2 Tax=Alicyclobacillus acidocaldarius RepID=C8WW56_ALIAD Length = 213 Score = 47.4 bits (111), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 40/124 (32%), Positives = 56/124 (45%), Gaps = 22/124 (17%) Query: 39 HFRRILEAWRNQLRDEVDRTVTHMQDEAANFPD-----------PVDRAAQEEEFSLELR 87 R LEA R +L D ++ T +A PD P D A++ L LR Sbjct: 5 SIRSRLEAARERLIDRLNGAETSADIRSA-MPDEFSELAMYDNHPADVASE-----LALR 58 Query: 88 N-----RDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLA 142 N R R+ + + +E L ++ +G CESCG I RLEA PT C+DC+ Sbjct: 59 NQAVGERLRDERALADVEDALSRIRQGTYGQCESCGRPIPPDRLEAIPTTRRCVDCEREV 118 Query: 143 EIRE 146 E R+ Sbjct: 119 EARQ 122 >UniRef50_Q72G22 C4-type zinc finger protein, DksA/TraR family n=3 Tax=Desulfovibrio vulgaris RepID=Q72G22_DESVH Length = 176 Score = 47.4 bits (111), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 22/64 (34%), Positives = 36/64 (56%) Query: 76 AAQEEEFSLELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLC 135 A++ E +L + R I +E L+++E D+G CE CG +I + RL+A P LC Sbjct: 93 ASRLAEMALSVTLLHRAEHRIGLLENALRRLEAYDYGVCEGCGEDIPVARLKASPATRLC 152 Query: 136 IDCK 139 + C+ Sbjct: 153 VFCQ 156 >UniRef50_UPI0001B515E7 hypothetical protein SvirD4_35899 n=1 Tax=Streptomyces viridochromogenes DSM 40736 RepID=UPI0001B515E7 Length = 118 Score = 47.4 bits (111), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 20/67 (29%), Positives = 34/67 (50%) Query: 73 VDRAAQEEEFSLELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTA 132 +D A +E L RD +++K+I+ +V+D +G C+ C I + RLE P Sbjct: 48 IDEAGPDEAEQLMSAQRDTIERVLKEIDAAFARVQDRSYGVCQGCSTRIPVERLEILPYT 107 Query: 133 DLCIDCK 139 C+ C+ Sbjct: 108 RFCVPCQ 114 >UniRef50_B8CWL7 Transcriptional regulator, TraR/DksA family n=1 Tax=Halothermothrix orenii H 168 RepID=B8CWL7_HALOH Length = 228 Score = 47.4 bits (111), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 33/123 (26%), Positives = 57/123 (46%), Gaps = 8/123 (6%) Query: 32 MNEAQLAHFRRILEAWRNQLRDEV----DRTVTHMQDEAANFPD----PVDRAAQEEEFS 83 M+ + +R++L +N L E+ D ++D P D+ + + Sbjct: 1 MDRTKEKKYRQLLINEKNSLLHELKHFSDDEFASVKDSTGELSSYDNHPADQGSNTYDRE 60 Query: 84 LELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAE 143 + RD + L+ K+E L ++E+ ++G CE CG EI RLE P A LC C+ E Sbjct: 61 KDRGLRDNAQVLLNKVENALNRLEEGNYGLCEKCGQEIREERLETIPYATLCERCQAKEE 120 Query: 144 IRE 146 ++ Sbjct: 121 GKD 123 >UniRef50_Q67Q17 Putative uncharacterized protein n=1 Tax=Symbiobacterium thermophilum RepID=Q67Q17_SYMTH Length = 269 Score = 47.4 bits (111), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 26/74 (35%), Positives = 39/74 (52%) Query: 72 PVDRAAQEEEFSLELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPT 131 P D + E S +L R + I++IE L++++ +G CE CG I RL+A P+ Sbjct: 47 PADLGTETFERSKDLGLRSHMLRRIQEIESALQRMDQGTYGICEECGRPIDPERLKAFPS 106 Query: 132 ADLCIDCKTLAEIR 145 A CI C+ E R Sbjct: 107 ATTCITCQQRREAR 120 >UniRef50_Q1Q506 Similar to DnaK suppressor protein n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1Q506_9BACT Length = 140 Score = 47.0 bits (110), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 34/119 (28%), Positives = 59/119 (49%), Gaps = 21/119 (17%) Query: 36 QLAHFRRILEAWRNQLRDEVDRTVTHMQDEA------------ANFP---DPVDRAAQEE 80 + A +R++L + R +L +VD +MQ+E +N P V E Sbjct: 20 EYAPYRKLLLSLREKLVGKVD----YMQEETLKKSRQDASGDLSNVPIHMADVGTDNYER 75 Query: 81 EFSLELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCK 139 E +EL + ++ I+ L+++E+ FG CE+C +I RL+A P A LC++C+ Sbjct: 76 ELMIELMQSGEDS--VRSIDDALERIEEGTFGICEACEKKINRERLKAVPYASLCVNCQ 132 >UniRef50_A2SLK5 Putative DNA-binding protein n=1 Tax=Methylibium petroleiphilum PM1 RepID=A2SLK5_METPP Length = 122 Score = 47.0 bits (110), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 33/112 (29%), Positives = 54/112 (48%), Gaps = 4/112 (3%) Query: 32 MNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAA----NFPDPVDRAAQEEEFSLELR 87 MN A R L A +LRDE+ + + AA F + AA + E L++ Sbjct: 1 MNTRPCADLRDDLLAREARLRDELRAHRARLLEPAAATGNTFVAGSEGAAADAEDELDIT 60 Query: 88 NRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCK 139 ++ + ++ L+++ +G+CE CG IG+ RL A P A C+DC+ Sbjct: 61 LISHWQRELDEVSAALQRLNTGSYGHCERCGEPIGLPRLRALPEARHCLDCQ 112 >UniRef50_A3ZQT2 Probable DnaK suppressor protein n=1 Tax=Blastopirellula marina DSM 3645 RepID=A3ZQT2_9PLAN Length = 134 Score = 46.6 bits (109), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 29/99 (29%), Positives = 50/99 (50%) Query: 41 RRILEAWRNQLRDEVDRTVTHMQDEAANFPDPVDRAAQEEEFSLELRNRDRERKLIKKIE 100 + IL R+ LR + ++ +++ D VD A + L + + E + + +I+ Sbjct: 13 KEILLKRRDALRKALAGDLSMLKELEQTAGDVVDFALDSAQDELSSQLAEVESRELAQID 72 Query: 101 KTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCK 139 K L+++ FG CE C +I RL+A P A LCI C+ Sbjct: 73 KALERIRGGSFGECEGCTCKIPTARLQALPYATLCIKCQ 111 >UniRef50_B0TGP7 Putative uncharacterized protein n=1 Tax=Heliobacterium modesticaldum Ice1 RepID=B0TGP7_HELMI Length = 238 Score = 46.6 bits (109), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 24/72 (33%), Positives = 40/72 (55%) Query: 72 PVDRAAQEEEFSLELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPT 131 P D ++ E +L RDR + + +I K +++ + +G CE C +I R+ A PT Sbjct: 49 PADVGSEVYERGKDLATRDRFSRELDEIAKAKRRISEGIYGICERCHQKIPDARMAAMPT 108 Query: 132 ADLCIDCKTLAE 143 A LCI+C++ E Sbjct: 109 ATLCIECQSHEE 120 >UniRef50_B3DUR8 DnaK suppressor protein n=1 Tax=Methylacidiphilum infernorum V4 RepID=B3DUR8_METI4 Length = 249 Score = 46.6 bits (109), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 21/59 (35%), Positives = 38/59 (64%), Gaps = 2/59 (3%) Query: 81 EFSLELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCK 139 +F+L L +++ + + +I+ +LK++ED +G C+ CG I I RL+A P A +DC+ Sbjct: 149 DFALSLLSQENDSLI--EIDDSLKRIEDNTYGICQMCGKPIPIIRLQAIPYARFTVDCQ 205 >UniRef50_A6DCX4 Transcriptional regulator, TraR/DksA family protein n=1 Tax=Caminibacter mediatlanticus TB-2 RepID=A6DCX4_9PROT Length = 116 Score = 46.6 bits (109), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 32/115 (27%), Positives = 62/115 (53%), Gaps = 3/115 (2%) Query: 35 AQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAA--NFPDPVDRAAQEEEFSLELRNRDRE 92 + HF+ IL + +L +++ +++ DE + + D D AA + + + ++ Sbjct: 3 VNIEHFKEILLMRKAEL-EKILFNISNEIDEISRCDIKDDGDFAAASMDSGRDYQIYLKQ 61 Query: 93 RKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAEIREK 147 ++ +K+IE+ LK++E+ +G CE C I RL+ +P A CI C+ + E EK Sbjct: 62 KQELKEIEEALKRIEEGSYGICEMCDEPIQEERLKIKPYAKYCIICREIIEKEEK 116 >UniRef50_Q97H97 General stress protein, DnaK suppressor DskA, YTEA B.subtilis ortholog n=1 Tax=Clostridium acetobutylicum RepID=Q97H97_CLOAB Length = 200 Score = 46.2 bits (108), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 32/118 (27%), Positives = 52/118 (44%), Gaps = 9/118 (7%) Query: 32 MNEAQLAHFRRILEAWRNQL---------RDEVDRTVTHMQDEAANFPDPVDRAAQEEEF 82 M++ +L +F+ L R L D +D + + + P D A++ + Sbjct: 1 MDKKKLDYFKNKLMFERKSLMELIEQMRKNDTIDSKMEIASELSYYDNHPSDLASEFNDI 60 Query: 83 SLELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKT 140 + R E L+ KI + KVE +G CE CG I RLE P A+ C++C+ Sbjct: 61 QRGMAFRKNEEALLNKIGNAIDKVEHGGYGICEVCGKPISEERLEFVPYAENCVECQN 118 >UniRef50_B3EAN1 Transcriptional regulator, TraR/DksA family n=8 Tax=Geobacter RepID=B3EAN1_GEOLS Length = 218 Score = 46.2 bits (108), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 29/104 (27%), Positives = 54/104 (51%), Gaps = 3/104 (2%) Query: 40 FRRILEAWRNQLRDEVDRTVTHMQDEAAN---FPDPVDRAAQEEEFSLELRNRDRERKLI 96 ++IL A + Q E+ R++ + + D D+A+ E + L L DRER+ + Sbjct: 86 IQQILLAMKEQTLLEIKRSIKKGSEVSVGEEPTGDIYDQASSERDRELGLLLNDREREKL 145 Query: 97 KKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKT 140 I++ L ++ + ++G CE C +I + RL+ P C+ CK+ Sbjct: 146 HSIDEALLRIAEGEYGICEECDEDIPMGRLKVLPFTRHCVKCKS 189 >UniRef50_C6I0P9 Transcriptional regulator, TraR/DksA family n=3 Tax=Leptospirillum RepID=C6I0P9_9BACT Length = 136 Score = 46.2 bits (108), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 32/93 (34%), Positives = 47/93 (50%), Gaps = 11/93 (11%) Query: 55 VDRTVTHMQDEAANFPDPVDRAAQEEEFSLELRNRDRERKLIKKIEKTLKKVEDEDFGYC 114 VD + A + + VD A LE+RNR + + +++ L ++E+ +G C Sbjct: 42 VDSVLDQGDLSAIDMGEGVDLAL------LEMRNR-----MKRSVDQALLRLEEGSYGNC 90 Query: 115 ESCGVEIGIRRLEARPTADLCIDCKTLAEIREK 147 E CG EI +RL A P A LCI C+ E EK Sbjct: 91 EDCGGEIEEKRLMAMPFAQLCIKCQRKKEELEK 123 >UniRef50_C1F3S7 Putative RNA polymerase-binding protein DksA n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F3S7_ACIC5 Length = 139 Score = 46.2 bits (108), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 29/104 (27%), Positives = 48/104 (46%), Gaps = 5/104 (4%) Query: 41 RRILEAWRNQLRDEVDRTVTHM-----QDEAANFPDPVDRAAQEEEFSLELRNRDRERKL 95 R+ L+ + + E++R+V + E N DP D+A + L + Sbjct: 21 RKTLQQKLVEQKTELERSVLATVRQGREPEMENRIDPADQAVMSYQQELIFSQGTNKHTQ 80 Query: 96 IKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCK 139 + + L+++ED +G C CG +I RRLEA P CI C+ Sbjct: 81 LSLVRLALERLEDGSYGECAECGEDISPRRLEAVPWTPYCISCQ 124 >UniRef50_Q1D0G7 C4-type zinc finger domain protein, DksA/TraR family n=2 Tax=Cystobacterineae RepID=Q1D0G7_MYXXD Length = 130 Score = 46.2 bits (108), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 32/111 (28%), Positives = 51/111 (45%), Gaps = 3/111 (2%) Query: 32 MNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAANFPDPVDRAAQEEEFSLELRNRDR 91 MN Q + +L A ++L D+ + + + A D E NR+R Sbjct: 1 MNAKQRDELKALLLALHSELTDKTPSRIEPNRTDDARIGGDEDEQPLNEMMQAIASNRNR 60 Query: 92 ERK-LIKKIEKTLKKVEDED--FGYCESCGVEIGIRRLEARPTADLCIDCK 139 ++ ++ K L K+ D+ FG CE CG EI + RL A P A+ C+ C+ Sbjct: 61 NMDGVLARVLKALGKLRDDPDAFGECEECGDEIPLGRLRAMPYAEFCVTCQ 111 >UniRef50_Q7UEL7 Probable dnaK (DksA-like) supressor protein n=1 Tax=Rhodopirellula baltica RepID=Q7UEL7_RHOBA Length = 121 Score = 45.8 bits (107), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 26/83 (31%), Positives = 40/83 (48%), Gaps = 2/83 (2%) Query: 61 HMQDEAANFPDPVDRAAQEEEFSLELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVE 120 H+ D D DR + L R + E + + IE+ L+++ D FG CE CG Sbjct: 34 HVSDHTVG--DAGDRGIESHASELTSRMAESESRELADIEEALERLRDGTFGDCEDCGKS 91 Query: 121 IGIRRLEARPTADLCIDCKTLAE 143 I + RL+ P A C+ C+ +E Sbjct: 92 IPMNRLQVVPHARRCVRCQKASE 114 >UniRef50_B1I4J4 Transcriptional regulator, TraR/DksA family n=1 Tax=Candidatus Desulforudis audaxviator MP104C RepID=B1I4J4_DESAP Length = 212 Score = 45.8 bits (107), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 25/77 (32%), Positives = 43/77 (55%) Query: 72 PVDRAAQEEEFSLELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPT 131 P D A++ E S + R+ R + +E L +++ +G C+ CGV+I + RLEA P Sbjct: 54 PADIASETFERSKDFALRENARFRLLAVEDALARMDRGTYGRCDECGVDIDLERLEAVPF 113 Query: 132 ADLCIDCKTLAEIREKQ 148 C +CK AE ++++ Sbjct: 114 TTKCRECKARAEGKDER 130 >UniRef50_A0RK79 DnaK suppressor protein n=74 Tax=Bacillus RepID=A0RK79_BACAH Length = 243 Score = 45.8 bits (107), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 36/116 (31%), Positives = 58/116 (50%), Gaps = 14/116 (12%) Query: 36 QLAHFRRILEAWRNQLRDEVDRTVTHMQDEAANFPDPVDRAAQEE----EFSLELRNRDR 91 Q+ F+ +LE + +L + TH ++ A+ + V + + + + EL R++ Sbjct: 6 QINQFKSVLEKQKQELEQTIQ---THENEDRASERESVGELSSYDNHPADMATELYEREK 62 Query: 92 ERKLI----KKIEKT---LKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKT 140 + LI K++E T L+K+E +G CE G EI RLEA PTA CI T Sbjct: 63 DFGLIELWHKQLEDTKHALQKIEAGTYGICEVSGEEIPFERLEAMPTATTCIQHAT 118 >UniRef50_D1BG79 DnaK suppressor protein n=1 Tax=Sanguibacter keddieii DSM 10542 RepID=D1BG79_SANKS Length = 129 Score = 45.4 bits (106), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 18/43 (41%), Positives = 27/43 (62%) Query: 96 IKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDC 138 +++++ L ++ +G C CG I RLEARP+A LCIDC Sbjct: 81 LEEVDGALARIAAGTYGTCTRCGRPISAGRLEARPSAPLCIDC 123 >UniRef50_Q894D3 DnaK suppressor protein n=1 Tax=Clostridium tetani RepID=Q894D3_CLOTE Length = 210 Score = 45.1 bits (105), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 40/130 (30%), Positives = 60/130 (46%), Gaps = 35/130 (26%) Query: 32 MNEAQLAHFR-RILEAWRNQLRDEVDRTVTHMQDEAANFPDPVDRAAQEEEFSLELRNRD 90 M++ +L HF+ R+L+ R EV T+ M+ D EEFS EL + D Sbjct: 1 MDKERLQHFKNRLLKEKR-----EVMETIDLMK--------KADTINSNEEFSQELSSYD 47 Query: 91 ------------RERKL---------IKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEAR 129 +ER L + KIE +L+ +E +G C++CG I RLE Sbjct: 48 NHPSDTASELFDKERGLAFKGNEINILNKIESSLESIEKGQYGNCKNCGKRINEDRLEFI 107 Query: 130 PTADLCIDCK 139 P A+ CI+C+ Sbjct: 108 PYAENCIECQ 117 >UniRef50_Q7MQQ3 Putative uncharacterized protein n=1 Tax=Wolinella succinogenes RepID=Q7MQQ3_WOLSU Length = 113 Score = 45.1 bits (105), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 18/43 (41%), Positives = 27/43 (62%) Query: 96 IKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDC 138 +KK+E L +++ DFG C+ C I +RL A P A +C+DC Sbjct: 66 LKKLEYALTRIDSPDFGICQICDEPIPYKRLFALPEATICVDC 108 >UniRef50_P42408 Uncharacterized protein yteA n=2 Tax=Bacillus subtilis group RepID=YTEA_BACSU Length = 239 Score = 45.1 bits (105), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 30/84 (35%), Positives = 45/84 (53%), Gaps = 14/84 (16%) Query: 72 PVDRAAQ----EEEFSLELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLE 127 P D+A + E++ +L+L ER+ ++ IE +LK +E+ +G CE G EI RLE Sbjct: 52 PGDQATELYEREKDIALDLH----EREHLRDIEHSLKAIENGTYGICEVSGKEIPFERLE 107 Query: 128 ARPTADLCIDCKTLAEIREKQMAG 151 A PTA TLAE + + Sbjct: 108 ALPTA------TTLAEYSSQDVVS 125 >UniRef50_C0ZG84 Putative uncharacterized protein yteA n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZG84_BREBN Length = 257 Score = 45.1 bits (105), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 33/113 (29%), Positives = 58/113 (51%), Gaps = 11/113 (9%) Query: 32 MNEAQLAHFRRILEAWRNQLRDEV-------DRTVTHMQDEAANFPDPVDRAAQ--EEEF 82 +++ +A FR L + +L D V + T +Q+ + P D ++ E E Sbjct: 5 VDQKMVASFREKLLEQKKELEDRVQDHYGMREPMTTSLQEFSMYDNHPADIGSEMFEREK 64 Query: 83 SLELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLC 135 L L + DRE +K+I++ L+++E+ +G C CG +I + RLEA P + C Sbjct: 65 DLALDSLDRE--TLKEIDQALQRMEEGTYGLCTVCGEQIPVERLEALPQSQTC 115 >UniRef50_C9RQK2 Transcriptional regulator, TraR/DksA family n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RQK2_FIBSS Length = 157 Score = 45.1 bits (105), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 21/49 (42%), Positives = 31/49 (63%) Query: 91 RERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCK 139 RE K + +E+ LK++++ FG C+ CG I RL A PTA C++CK Sbjct: 75 REGKYLVYLEEALKRIKNGTFGVCKICGQLIPKARLMAVPTATKCVNCK 123 >UniRef50_Q2IQL4 Transcriptional regulator, TraR/DksA family n=3 Tax=Anaeromyxobacter RepID=Q2IQL4_ANADE Length = 139 Score = 45.1 bits (105), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 22/71 (30%), Positives = 40/71 (56%), Gaps = 1/71 (1%) Query: 70 PDPVDRAAQEEEF-SLELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEA 128 P P D AA+ ++ S+ + R+ + +I+ L++++ +G C +CG +G++RL A Sbjct: 62 PRPSDPAARWADYESMPAPVAEGVRRELAEIDAALERIQQGRYGTCLACGGPMGLQRLRA 121 Query: 129 RPTADLCIDCK 139 P A CI C Sbjct: 122 IPEARYCIACS 132 >UniRef50_Q01TC0 Transcriptional regulator, TraR/DksA family n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q01TC0_SOLUE Length = 136 Score = 45.1 bits (105), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 26/98 (26%), Positives = 47/98 (47%), Gaps = 1/98 (1%) Query: 39 HFRRILEAWRNQLRDEVDRTVTHMQDEA-ANFPDPVDRAAQEEEFSLELRNRDRERKLIK 97 HF+ L + R +L D + R ++ + DP+DR+ + L N + + ++ Sbjct: 20 HFKEKLLSKRRELVDAIGRAEQEVRTASEGEVGDPLDRSVDDTAADEGLHNSSVDSETLQ 79 Query: 98 KIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLC 135 +++ L+++E +G C CG I RLEA P C Sbjct: 80 QVDDALRRIEQGSYGKCVICGKPIEPARLEAIPWTPYC 117 >UniRef50_A3JJC9 Putative uncharacterized protein n=1 Tax=Marinobacter sp. ELB17 RepID=A3JJC9_9ALTE Length = 111 Score = 45.1 bits (105), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 37/114 (32%), Positives = 57/114 (50%), Gaps = 12/114 (10%) Query: 32 MNEAQLAHFRRILEAWRNQL------RDEVDRTVTHMQDEAANFPDPVDRAAQEEEFSLE 85 M L FR +L A R+ L RDE TV H+ ++ +D A Q + + Sbjct: 1 MATENLEKFRILLLAQRDDLLPTSEVRDESSATV-HLDQQSVGRLSRMD-ALQSQALAQA 58 Query: 86 LRNR-DRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDC 138 + R DR+ +LI E L +++++++G C CG I +RLE PT+ CI C Sbjct: 59 GKVRADRQLRLI---EAALLRIDNDEYGDCRECGEPINPKRLEVDPTSLYCIHC 109 >UniRef50_A5D3H2 Putative uncharacterized protein n=1 Tax=Pelotomaculum thermopropionicum SI RepID=A5D3H2_PELTS Length = 242 Score = 45.1 bits (105), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 23/68 (33%), Positives = 37/68 (54%) Query: 72 PVDRAAQEEEFSLELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPT 131 P D ++ E S + R+ + I++ L K+E+ +G C++CG EI + RLEA P+ Sbjct: 55 PADIGSELFERSKDFALRENAMLAVAAIDRALAKIENGTYGKCDNCGREIPLERLEAVPS 114 Query: 132 ADLCIDCK 139 C CK Sbjct: 115 TVCCKKCK 122 >UniRef50_D1N407 Transcriptional regulator, TraR/DksA family n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1N407_9BACT Length = 133 Score = 44.7 bits (104), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 25/75 (33%), Positives = 40/75 (53%), Gaps = 3/75 (4%) Query: 74 DRAAQEEEFSLELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTAD 133 D ++ +EL+ E +++ IE +K++ D ++G C+ CG I RL RP A Sbjct: 56 DVSSDNSRHEMELQLLSEEGDVLRLIEDAIKRLVDGEYGKCQECGEPISEGRLAIRPYAV 115 Query: 134 LCIDCKTLAEIREKQ 148 C+ CK E+ EKQ Sbjct: 116 YCVKCK---EMHEKQ 127 >UniRef50_D2MJ83 Transcriptional regulator, TraR/DksA family n=1 Tax=Candidatus Poribacteria sp. WGA-A3 RepID=D2MJ83_9BACT Length = 123 Score = 44.7 bits (104), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 30/105 (28%), Positives = 57/105 (54%), Gaps = 11/105 (10%) Query: 49 NQLRDEVDRTVTHMQDEAANFPDPVDRAAQ-----EEEFSLELR-NRDRERKLIKKIEKT 102 +++D++ +++T +++ F +D Q E E + L+ R+RER++I ++ Sbjct: 16 KEIQDQLGQSLT--EEQQRRFESAMDSGDQALLDLEREMGISLQEKRNRERQMI---DEA 70 Query: 103 LKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAEIREK 147 L +E+ +G C C EI +RL P A LC++C+ E+ EK Sbjct: 71 LVSLEEGTYGICVECNTEISEKRLAVMPFARLCVECQEKIELLEK 115 >UniRef50_A6TRY0 Transcriptional regulator, TraR/DksA family n=1 Tax=Alkaliphilus metalliredigens QYMF RepID=A6TRY0_ALKMQ Length = 224 Score = 44.7 bits (104), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 28/117 (23%), Positives = 56/117 (47%), Gaps = 10/117 (8%) Query: 32 MNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDE----------AANFPDPVDRAAQEEE 81 M+ + +F+R L +N + + R + D+ +A P D ++ Sbjct: 1 MDPKKQGYFKRRLHEEKNNALETLTRMEANQGDDESMRENTGELSAYDNHPADLGSEMFM 60 Query: 82 FSLELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDC 138 S++ + ER + +I++ L+K+++ +G C+ CG I RLE P A++C+ C Sbjct: 61 MSMQANLENHERYRVTEIDRALEKIQEGTYGECQLCGQGIPDERLEVMPEANICMVC 117 >UniRef50_A8LJD1 Transcriptional regulator n=1 Tax=Dinoroseobacter shibae DFL 12 RepID=A8LJD1_DINSH Length = 92 Score = 44.7 bits (104), Expect = 9e-04, Method: Compositional matrix adjust. Identities = 26/71 (36%), Positives = 35/71 (49%), Gaps = 8/71 (11%) Query: 70 PDPVDRAAQEEEF-SLELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEA 128 P V R + E S ELR ++++E LK++E +G C +CG EI RL A Sbjct: 26 PGAVTRPGRRAEAGSPELRQ-------LRRLELALKRIETGAYGLCMACGGEISPGRLHA 78 Query: 129 RPTADLCIDCK 139 P LC CK Sbjct: 79 CPATALCASCK 89 >UniRef50_C6PE95 Transcriptional regulator, TraR/DksA family n=1 Tax=Thermoanaerobacterium thermosaccharolyticum DSM 571 RepID=C6PE95_CLOTS Length = 207 Score = 44.7 bits (104), Expect = 0.001, Method: Compositional matrix adjust. Identities = 33/124 (26%), Positives = 54/124 (43%), Gaps = 23/124 (18%) Query: 32 MNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDE-----------------AANFPDPVD 74 M++ +L HFR+ L +N + T+ M D A N P + Sbjct: 1 MDDEKLEHFRKKLIEEKNNIL----HTLNEMDDNDGTGRMAEREYYQELSLADNHPADIG 56 Query: 75 RAAQEEEFSLELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADL 134 E E + L+ D E+ ++++I+ L ++ +G C C EI + RLEA P L Sbjct: 57 SEVYEIEKNYALK--DNEQHVLRQIDDALLRMVKGQYGICNHCHKEIELDRLEALPYTSL 114 Query: 135 CIDC 138 C +C Sbjct: 115 CANC 118 >UniRef50_Q12HC6 Transcriptional regulators, TraR/DksA family n=1 Tax=Polaromonas sp. JS666 RepID=Q12HC6_POLSJ Length = 130 Score = 44.7 bits (104), Expect = 0.001, Method: Compositional matrix adjust. Identities = 34/110 (30%), Positives = 55/110 (50%), Gaps = 6/110 (5%) Query: 36 QLAHFRRILEAWRNQLRDEVDRTVTHMQDE-----AANFPDPVDRAAQEEEFSLELRNRD 90 QL RR L QL+ EV R + E A + DP + A + LE + Sbjct: 8 QLDLLRRALAERDAQLQVEV-RAAKEVAAERPPATARDVQDPGEDAEERYRQGLEHVDLQ 66 Query: 91 RERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKT 140 R+++ ++ I++ +++ D +G C CG I RL+A+P+A CI C+T Sbjct: 67 RDQEELRAIQQAQERMADGSYGGCIDCGQPIPFERLKAQPSASRCIACQT 116 >UniRef50_Q2B4E3 Putative uncharacterized protein n=4 Tax=Bacillus RepID=Q2B4E3_9BACI Length = 252 Score = 44.7 bits (104), Expect = 0.001, Method: Compositional matrix adjust. Identities = 18/42 (42%), Positives = 26/42 (61%) Query: 96 IKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCID 137 + K+ K L+ +ED +G C CG ++ RLEA PTA C+D Sbjct: 76 LDKVNKALQAIEDGTYGKCRECGKDLPFERLEAVPTALYCVD 117 >UniRef50_D2LWG8 Transcriptional regulator, TraR/DksA family n=1 Tax=Bacillus cellulosilyticus DSM 2522 RepID=D2LWG8_BACS4 Length = 242 Score = 44.3 bits (103), Expect = 0.001, Method: Compositional matrix adjust. Identities = 24/73 (32%), Positives = 40/73 (54%), Gaps = 1/73 (1%) Query: 65 EAANFPD-PVDRAAQEEEFSLELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGI 123 E +N+ + P D+ + E ++ + +L+ +I+ LK +E+ +G CE CG +I Sbjct: 43 ELSNYDNHPGDQGTELYEREKDIALNEHSEQLLDEIDNALKAIEEGSYGKCEVCGTDIPY 102 Query: 124 RRLEARPTADLCI 136 RLEA P A CI Sbjct: 103 ERLEAIPNARRCI 115 >UniRef50_C3KFN9 Putative uncharacterized protein n=8 Tax=Bacteria RepID=C3KFN9_PSEFL Length = 119 Score = 44.3 bits (103), Expect = 0.001, Method: Compositional matrix adjust. Identities = 31/115 (26%), Positives = 55/115 (47%), Gaps = 14/115 (12%) Query: 37 LAHFRRILEAWRNQLRDEVDRTVTHMQDEAANF---PDPVDR-----AAQEEEFSLELRN 88 LAHF+ +LE Q E+DR + + + + V R A Q++ + +R Sbjct: 9 LAHFKTLLE----QRAAELDRLLEDAESRSQSVELDQSKVGRLSRMDALQQQAMNDAIRG 64 Query: 89 RDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAE 143 R + ++ ++++ LK+ ++G+C CG I + RL P LCI C + E Sbjct: 65 RAQHERV--RLQQALKRWHKGEYGWCNQCGALIALGRLVFDPATPLCITCASRVE 117 >UniRef50_Q8ENZ4 Putative uncharacterized protein OB2328 n=1 Tax=Oceanobacillus iheyensis RepID=Q8ENZ4_OCEIH Length = 116 Score = 44.3 bits (103), Expect = 0.001, Method: Compositional matrix adjust. Identities = 35/106 (33%), Positives = 54/106 (50%), Gaps = 11/106 (10%) Query: 36 QLAHFRRILEAWRNQLRDEVDRTVTHMQDEAANFPD-PVDRAA----QEEEFSLELRNRD 90 +L +F+ L+ + +L D+ R + DE A++ + P D Q+ + L L Sbjct: 9 KLNYFKEKLQQMKEELEDK--RNINSNSDELADYDNHPADMGTEQFEQQRDAGLNLM--- 63 Query: 91 RERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCI 136 RE +L K+IE L+K+ED +G E G I RLE PTA L + Sbjct: 64 RENQL-KEIEDALQKIEDGTYGISEKSGEPIPEERLEVLPTARLLV 108 >UniRef50_B1KFH6 Transcriptional regulator, TraR/DksA family n=3 Tax=Shewanella RepID=B1KFH6_SHEWM Length = 131 Score = 44.3 bits (103), Expect = 0.001, Method: Compositional matrix adjust. Identities = 16/38 (42%), Positives = 27/38 (71%) Query: 106 VEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAE 143 ++ +++G+C CG IG+ RL PTA++CI C++ AE Sbjct: 92 LDTDEYGFCLECGEPIGLGRLTIHPTAEMCIGCQSEAE 129 >UniRef50_Q1CWM4 Conserved domain protein n=1 Tax=Myxococcus xanthus DK 1622 RepID=Q1CWM4_MYXXD Length = 101 Score = 44.3 bits (103), Expect = 0.001, Method: Compositional matrix adjust. Identities = 19/47 (40%), Positives = 26/47 (55%) Query: 96 IKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLA 142 ++ IE+ L ++ +FG C CG IG RL A P A C+ C LA Sbjct: 54 LRDIEEALTRIAHGEFGRCARCGGAIGRHRLRAVPEARHCLTCAALA 100 >UniRef50_Q253H0 DnaK suppressor n=16 Tax=Chlamydiales RepID=Q253H0_CHLFF Length = 124 Score = 43.9 bits (102), Expect = 0.001, Method: Compositional matrix adjust. Identities = 29/119 (24%), Positives = 59/119 (49%), Gaps = 17/119 (14%) Query: 32 MNEAQLAHFRRILEAWRNQLRDEV----------DRTVTHMQDEAANFPDPVDRAAQEEE 81 ++E ++A+F+ L +++L + + + Q +A D DR Sbjct: 3 LSEEEIANFKHRLLEMKHKLSHTLEGNAQEVKKPNEATGYSQHQADQGTDTFDRT----- 57 Query: 82 FSLELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKT 140 SLE+ ++ E L+++I + L+K+E+ +G C+ G EI + RL A P A + + ++ Sbjct: 58 ISLEVTTKEYE--LLRQINRALEKIEESSYGICDVSGEEIPLARLMAIPYATMTVKAQS 114 >UniRef50_D0CY54 Transcriptional regulator, TraR/DksA family n=1 Tax=Silicibacter lacuscaerulensis ITI-1157 RepID=D0CY54_9RHOB Length = 112 Score = 43.9 bits (102), Expect = 0.002, Method: Compositional matrix adjust. Identities = 29/114 (25%), Positives = 50/114 (43%), Gaps = 8/114 (7%) Query: 32 MNEAQLAHFRRILEAWRNQLRDEVD-----RTVTHMQDEAANFPDPVDRAAQEEEFSLEL 86 MN+A+L F ++ A +L + ++V + +A +D + + Sbjct: 1 MNQAELKEFETLIRARLAELEQNSEAGKQAQSVVELDQQAVGRLSRMDALQNQAIAKAQQ 60 Query: 87 RNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKT 140 RD E +++ L ++ +FGYCE CG I RLE P A C+ C + Sbjct: 61 TRRDLE---ARRLNAALTRISKGEFGYCEDCGDAIARGRLELDPAAGKCVSCAS 111 >UniRef50_B2KE71 Transcriptional regulator, TraR/DksA family n=1 Tax=Elusimicrobium minutum Pei191 RepID=B2KE71_ELUMP Length = 258 Score = 43.9 bits (102), Expect = 0.002, Method: Compositional matrix adjust. Identities = 25/87 (28%), Positives = 43/87 (49%) Query: 57 RTVTHMQDEAANFPDPVDRAAQEEEFSLELRNRDRERKLIKKIEKTLKKVEDEDFGYCES 116 +T M+ A DP+D A Q + + D I +IE L+K++ +G CE+ Sbjct: 170 KTKKEMEMPEAEVGDPIDTATQSLDKEILFEQTDNSHTQIDQIESALRKIDKGIYGKCEN 229 Query: 117 CGVEIGIRRLEARPTADLCIDCKTLAE 143 C + +R++A P A C+ C++ E Sbjct: 230 CRQLLPKKRIKALPFARYCVVCQSSKE 256 >UniRef50_A8MH72 Transcriptional regulator, TraR/DksA family n=1 Tax=Alkaliphilus oremlandii OhILAs RepID=A8MH72_ALKOO Length = 226 Score = 43.9 bits (102), Expect = 0.002, Method: Compositional matrix adjust. Identities = 30/119 (25%), Positives = 60/119 (50%), Gaps = 14/119 (11%) Query: 32 MNEAQLAHFRRILEAWRNQLRDEVDRTVTHM---------QDEAANFPD-PVDRAAQEEE 81 M + +L +FR L + Q+ ++ +H +E +++ + P D + E Sbjct: 1 MEKKKLEYFRGKLLKEKKQVMKTIELMKSHYPTDASMKEYTEELSSYDNHPADLGS--EM 58 Query: 82 FSLELRNR--DRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDC 138 F +E++N + E+ + +I+ ++K+ + +G C+ CG +I RLE P + CIDC Sbjct: 59 FMMEMQNNLENHEKNRLLEIDDAVQKINEGTYGNCQICGNKILEERLEIMPASITCIDC 117 >UniRef50_B8GPY8 Transcriptional regulator, TraR/DksA family n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GPY8_THISH Length = 114 Score = 43.5 bits (101), Expect = 0.002, Method: Compositional matrix adjust. Identities = 29/102 (28%), Positives = 52/102 (50%), Gaps = 1/102 (0%) Query: 40 FRRILEAWRNQLRDEVDRTVTHMQDEAANF-PDPVDRAAQEEEFSLELRNRDRERKLIKK 98 RR LE R+ L+ +DR +++ EA D ++A Q E + + R+ + + Sbjct: 8 LRRQLEQLRDDLQSRLDRVERNVRHEAEPLDKDFAEQAVQRENEEVVDALGNEARRELAR 67 Query: 99 IEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKT 140 + + LK++ + ++G C +CG I RL+ P A LC C + Sbjct: 68 VHEALKRMNEGEYGICAACGEAIPEARLKILPQARLCAACAS 109 >UniRef50_A6Q9W6 DnaK suppressor protein DksA n=1 Tax=Sulfurovum sp. NBC37-1 RepID=A6Q9W6_SULNB Length = 118 Score = 43.5 bits (101), Expect = 0.002, Method: Compositional matrix adjust. Identities = 33/118 (27%), Positives = 58/118 (49%), Gaps = 4/118 (3%) Query: 32 MNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQD-EAANFPDPVDRAAQEEEFSLELRNRD 90 + + +L F L R Q+ ++ T ++ + D D AA E +++ + Sbjct: 2 LTQEELKEFENKLLDRRVQIEKNLNGTALELEGMRNLDLNDEGDYAAASAETAVDSAILE 61 Query: 91 RERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAEIREKQ 148 ++RK + +I+ L K+++ +G CE C IG RLE + A CI C+ EI EK+ Sbjct: 62 QQRKELAEIDLALDKIKNGTYGICEMCEEPIGKARLEVKNFARFCITCR---EINEKE 116 >UniRef50_UPI00016C4B65 DnaK suppressor protein DksA n=1 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C4B65 Length = 95 Score = 43.5 bits (101), Expect = 0.002, Method: Compositional matrix adjust. Identities = 17/48 (35%), Positives = 31/48 (64%) Query: 92 ERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCK 139 E K + +IE+ L++++ +G CE C ++I + RL A P + C+DC+ Sbjct: 5 EAKELAQIERALRRLKAGTYGKCEVCSIKIPVARLNALPFSTFCVDCQ 52 >UniRef50_D1RI55 DnaK suppressor protein n=1 Tax=Legionella longbeachae D-4968 RepID=D1RI55_LEGLO Length = 60 Score = 43.1 bits (100), Expect = 0.003, Method: Compositional matrix adjust. Identities = 17/26 (65%), Positives = 20/26 (76%) Query: 19 GVEPYQEKPGEEYMNEAQLAHFRRIL 44 G+ PYQE GEEYMNE QLAH +I+ Sbjct: 25 GITPYQETAGEEYMNEKQLAHIEKIV 50 >UniRef50_A6FZV7 Transcriptional regulator, TraR/DksA family protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6FZV7_9DELT Length = 130 Score = 43.1 bits (100), Expect = 0.003, Method: Compositional matrix adjust. Identities = 36/113 (31%), Positives = 53/113 (46%), Gaps = 8/113 (7%) Query: 32 MNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAANFPD----PVDRAAQEEEFSLELR 87 M+ A A R L + R++L + ++ + +A PD P+ Q S R Sbjct: 1 MDAATCAQMRERLLSLRDELIAKGKESIPPARTDAVAQPDEDEAPLTEMTQSIASS---R 57 Query: 88 NRDRERKLIKKIEKTLKKVED-EDFGYCESCGVEIGIRRLEARPTADLCIDCK 139 NR+R +KL E L ED E++G CE C I RRLE P +C+ C+ Sbjct: 58 NRERAQKLAAIREALLLIDEDPEEYGMCEDCEEPIKRRRLELMPWVSVCVQCQ 110 >UniRef50_Q1NSE5 Zn-finger, prokaryotic DksA/TraR C4 type n=2 Tax=Proteobacteria RepID=Q1NSE5_9DELT Length = 116 Score = 42.7 bits (99), Expect = 0.003, Method: Compositional matrix adjust. Identities = 19/50 (38%), Positives = 28/50 (56%) Query: 96 IKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAEIR 145 +++I+ K++E D+GYC C EI RL P+ CIDC AE + Sbjct: 67 LQRIQAAFKRIESGDYGYCVVCQDEISQGRLRFDPSVLTCIDCARNAETK 116 >UniRef50_A8LRU0 Putative uncharacterized protein n=3 Tax=Rhodobacteraceae RepID=A8LRU0_DINSH Length = 117 Score = 42.7 bits (99), Expect = 0.003, Method: Compositional matrix adjust. Identities = 19/41 (46%), Positives = 24/41 (58%) Query: 99 IEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCK 139 I L ++E +FGYC CG IG+ RL+ PT C DCK Sbjct: 76 IVAALHRMETGEFGYCVDCGGFIGLPRLDVDPTTAECRDCK 116 >UniRef50_D2R7B0 Transcriptional regulator, TraR/DksA family n=2 Tax=Planctomycetaceae RepID=D2R7B0_9PLAN Length = 123 Score = 42.7 bits (99), Expect = 0.003, Method: Compositional matrix adjust. Identities = 30/103 (29%), Positives = 45/103 (43%), Gaps = 12/103 (11%) Query: 44 LEAWRNQLRDEVDRTVTHMQDEAA-NFPDPVDRAAQEEEFSLELRNRDRERKLIKKIEKT 102 L R++ ++ HM D NF E+EF+L L D +++IE Sbjct: 32 LGKTRSENSGDLSSMPIHMADVGTDNF---------EQEFTLSLMEHDGST--LEQIEAA 80 Query: 103 LKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAEIR 145 L+++E +G C CG +I RLE P C+ C A R Sbjct: 81 LERIEAGAYGVCTECGCKIPKARLEVLPYTAHCVKCAEKASPR 123 >UniRef50_A6C001 Probable DnaK suppressor protein n=1 Tax=Planctomyces maris DSM 8797 RepID=A6C001_9PLAN Length = 141 Score = 42.7 bits (99), Expect = 0.003, Method: Compositional matrix adjust. Identities = 23/68 (33%), Positives = 36/68 (52%) Query: 71 DPVDRAAQEEEFSLELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARP 130 D D A +E LE + E K + +I + + +++ +G+CESC I I RL+A P Sbjct: 32 DSGDAAIRERRQDLESHLAEIEYKELMQIRRAISLIQEGRYGHCESCNKNIPIARLKAVP 91 Query: 131 TADLCIDC 138 A C+ C Sbjct: 92 YAMFCVSC 99 >UniRef50_Q3A5P4 DnaK suppressor protein n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A5P4_PELCD Length = 127 Score = 42.7 bits (99), Expect = 0.003, Method: Compositional matrix adjust. Identities = 24/62 (38%), Positives = 35/62 (56%) Query: 90 DRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAEIREKQM 149 D R+ I +I++ L+++ D +G CE+CG I I RLE P C+ C+ AE K Sbjct: 60 DAGREEILEIDEALERLRDGSYGRCEACGKTIDIARLEILPFTRRCLTCRQEAEKEAKTK 119 Query: 150 AG 151 AG Sbjct: 120 AG 121 >UniRef50_A4A689 DnaK suppressor protein n=2 Tax=unclassified Gammaproteobacteria RepID=A4A689_9GAMM Length = 106 Score = 42.7 bits (99), Expect = 0.003, Method: Compositional matrix adjust. Identities = 19/46 (41%), Positives = 27/46 (58%) Query: 93 RKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDC 138 R+ I ++ L ++E+ +G C CG I RLEARP A CI+C Sbjct: 59 REAIVALKAALLRMEEGSYGVCVECGGTIAAARLEARPEATHCINC 104 >UniRef50_A0LA91 Transcriptional regulator, TraR/DksA family n=5 Tax=Bacteria RepID=A0LA91_MAGSM Length = 119 Score = 42.7 bits (99), Expect = 0.004, Method: Compositional matrix adjust. Identities = 19/55 (34%), Positives = 32/55 (58%) Query: 91 RERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAEIR 145 R ++ +++I+ L ++ D FG C CG +I +RL+ P+ CI C + AE R Sbjct: 65 RRQQELRRIDAALVRLTDGSFGECLVCGGQIAPQRLQWDPSVATCIGCASRAESR 119 >UniRef50_Q39WX5 Transcriptional regulators, TraR/DksA family n=4 Tax=Geobacter RepID=Q39WX5_GEOMG Length = 130 Score = 42.7 bits (99), Expect = 0.004, Method: Compositional matrix adjust. Identities = 31/113 (27%), Positives = 53/113 (46%), Gaps = 5/113 (4%) Query: 29 EEYMNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAANFPDPV-DRAAQEEEFSLELR 87 +E + E LA RR+ R +L +V + D P V DR + + Sbjct: 9 QERLMELLLAEKRRLWGEVRRELFGQVGGELQSQND----LPQDVGDRGLIDTLEDTGMA 64 Query: 88 NRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKT 140 D R+ + ++++ L ++++ +G+C+ CG EI RL P A CI C+T Sbjct: 65 VADIRRQELTRMDEALGRLKEGRYGFCDECGAEIDEGRLRVAPYAPCCISCQT 117 >UniRef50_D1YA14 C4-type zinc finger protein, DksA/TraR family n=3 Tax=Propionibacterium acnes RepID=D1YA14_PROAC Length = 159 Score = 42.7 bits (99), Expect = 0.004, Method: Compositional matrix adjust. Identities = 22/69 (31%), Positives = 36/69 (52%) Query: 71 DPVDRAAQEEEFSLELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARP 130 D +D + + E E+ R + + + L+ ++ +G CESCG IG RL+A P Sbjct: 85 DTIDVGSSQFERDQEISVTRNARAVYDQSKLALQLLDRGTWGTCESCGEPIGKARLQAFP 144 Query: 131 TADLCIDCK 139 A +C+ CK Sbjct: 145 RATMCVKCK 153 >UniRef50_Q2SPR7 DnaK suppressor protein n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SPR7_HAHCH Length = 107 Score = 42.7 bits (99), Expect = 0.004, Method: Compositional matrix adjust. Identities = 26/103 (25%), Positives = 53/103 (51%), Gaps = 9/103 (8%) Query: 48 RNQLRDEVDRTVTHMQDEAANFPDPVDRAAQEEEFSLELRNRDRERKL-------IKKIE 100 +N+L + + +T ++D + + +A E + E N D L I +++ Sbjct: 7 KNRLSEHLSVLITRLEDITRDLTS--EHSADSAEQAQERENDDVLNALKVETEIEINQVK 64 Query: 101 KTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAE 143 K L++++ ++G C +CG +I RL+ P A+LC+ C + +E Sbjct: 65 KALQRLQQGEYGVCVACGEDIPESRLQVLPFAELCVSCASKSE 107 >UniRef50_Q7UR73 Probable DnaK suppressor protein n=1 Tax=Rhodopirellula baltica RepID=Q7UR73_RHOBA Length = 140 Score = 42.4 bits (98), Expect = 0.004, Method: Compositional matrix adjust. Identities = 26/73 (35%), Positives = 40/73 (54%) Query: 71 DPVDRAAQEEEFSLELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARP 130 D +D AA + L + + E + + IE+ + + E+ FG CE CG I + RL+A P Sbjct: 42 DALDAAADTVQDELNSQLVEVESRELLAIEEAIARFEEGRFGDCEDCGKPIPLNRLKAIP 101 Query: 131 TADLCIDCKTLAE 143 A CI+C+ AE Sbjct: 102 YAVDCINCRRAAE 114 >UniRef50_A5FM28 Transcriptional regulator, TraR/DksA family n=50 Tax=Bacteroidetes RepID=A5FM28_FLAJ1 Length = 126 Score = 42.4 bits (98), Expect = 0.004, Method: Compositional matrix adjust. Identities = 32/116 (27%), Positives = 61/116 (52%), Gaps = 7/116 (6%) Query: 33 NEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAANFPD---PVDRAAQE--EEFSLELR 87 ++A LA F+ I++A + ++++D + ++ N D P +A +E E S E Sbjct: 9 SDADLAEFKEIIQAKIKKAQEDLDLIKSAYMNDLNNGTDDTSPTFKAFEEGSETMSKEAN 68 Query: 88 NR--DRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTL 141 ++ R+ K I+ ++ L +VE++ +G C+ G I RL+ P A + I+ K L Sbjct: 69 SQLAIRQEKFIRDLKNALFRVENKTYGICKVTGKLISKERLKIVPHATMSIEAKNL 124 >UniRef50_A6BB80 DnaK suppressor protein n=1 Tax=Vibrio parahaemolyticus AQ3810 RepID=A6BB80_VIBPA Length = 46 Score = 42.4 bits (98), Expect = 0.004, Method: Composition-based stats. Identities = 17/27 (62%), Positives = 21/27 (77%) Query: 24 QEKPGEEYMNEAQLAHFRRILEAWRNQ 50 + KPGEEYM+ AQ+ HF +IL AWR Q Sbjct: 18 ERKPGEEYMSPAQVEHFTKILTAWRLQ 44 >UniRef50_B0K2T3 Transcriptional regulator, TraR/DksA family n=10 Tax=Thermoanaerobacteraceae RepID=B0K2T3_THEPX Length = 206 Score = 42.4 bits (98), Expect = 0.004, Method: Compositional matrix adjust. Identities = 29/118 (24%), Positives = 54/118 (45%), Gaps = 11/118 (9%) Query: 32 MNEAQLAHFRRILEAWRNQLRDEVDRTVT-----------HMQDEAANFPDPVDRAAQEE 80 M+ +L HFR++L + ++ +++ + Q+ + P D A++ Sbjct: 1 MDSEKLEHFRQLLLKEKEKVLSTINQMNLNDGIGGIAQREYYQELSLLDNHPADFASEVY 60 Query: 81 EFSLELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDC 138 E +D E+ ++++IE K++E +G C C I RLEA P LC +C Sbjct: 61 EVEKNYALKDNEKYILRQIEDAFKRMEIGTYGICAHCHKPIEEERLEALPYTVLCAEC 118 >UniRef50_D2R5D7 Transcriptional regulator, TraR/DksA family n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2R5D7_9PLAN Length = 150 Score = 42.4 bits (98), Expect = 0.004, Method: Compositional matrix adjust. Identities = 28/107 (26%), Positives = 52/107 (48%) Query: 44 LEAWRNQLRDEVDRTVTHMQDEAANFPDPVDRAAQEEEFSLELRNRDRERKLIKKIEKTL 103 L A R+ LR + V + + D +D + + + + + E + + +I++ + Sbjct: 14 LIARRDALRRTIAGEVQSLYTSESGVVDELDTSLADANAEIGSQMVEVESRELMQIDRAI 73 Query: 104 KKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAEIREKQMA 150 +K+ +G C+SCG I + RL+A P A CI+C E RE + Sbjct: 74 EKMRAGRYGLCDSCGGPIKLIRLQAVPYAIECIECARRDERRESGLG 120 >UniRef50_C8X5B5 Transcriptional regulator, TraR/DksA family n=1 Tax=Desulfohalobium retbaense DSM 5692 RepID=C8X5B5_DESRD Length = 112 Score = 42.4 bits (98), Expect = 0.005, Method: Compositional matrix adjust. Identities = 20/79 (25%), Positives = 44/79 (55%), Gaps = 5/79 (6%) Query: 65 EAANFPDPVDRAAQEEEF---SLELRNRDRERKLIKKIEKTLKKVE--DEDFGYCESCGV 119 E P+ R ++ + + + + ++ + + ++E+ LK+++ D ++G C CG Sbjct: 32 ETVELDQPIGRLSRMDSMVNQGIVMSSLNKTKHRLARLEQALKRLDADDPEYGLCVECGE 91 Query: 120 EIGIRRLEARPTADLCIDC 138 EI ++RL A P +++CI C Sbjct: 92 EIALKRLLALPESEVCIHC 110 >UniRef50_A4F8B9 Possible suppressor protein DnaK n=6 Tax=Actinomycetales RepID=A4F8B9_SACEN Length = 125 Score = 42.4 bits (98), Expect = 0.005, Method: Compositional matrix adjust. Identities = 17/48 (35%), Positives = 27/48 (56%) Query: 93 RKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKT 140 R+ ++ +++ +++D +G CE CG I RLEA P CI C T Sbjct: 75 RRDLEALDRAAARLDDGTYGLCERCGSPIAPERLEALPATTTCIACAT 122 >UniRef50_A4J571 Transcriptional regulator, TraR/DksA family n=1 Tax=Desulfotomaculum reducens MI-1 RepID=A4J571_DESRM Length = 234 Score = 42.4 bits (98), Expect = 0.005, Method: Compositional matrix adjust. Identities = 25/69 (36%), Positives = 34/69 (49%) Query: 72 PVDRAAQEEEFSLELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPT 131 P D A + E + R+ + I+ L K+E+ +G CE C EI RLEA P Sbjct: 51 PGDVATEMFERGKDFALREDAITTLGAIDDALDKMEEGMYGICEVCHQEISQDRLEAIPY 110 Query: 132 ADLCIDCKT 140 CIDCK+ Sbjct: 111 TTQCIDCKS 119 >UniRef50_D2S7M9 Transcriptional regulator, TraR/DksA family n=1 Tax=Geodermatophilus obscurus DSM 43160 RepID=D2S7M9_9ACTO Length = 106 Score = 42.4 bits (98), Expect = 0.005, Method: Compositional matrix adjust. Identities = 35/104 (33%), Positives = 50/104 (48%), Gaps = 18/104 (17%) Query: 38 AHFRRILEAWRNQLRDEVDRTVTHMQDEAANFPD--PVDRAAQEEEFSLELRNRDRERKL 95 A FR +LE Q D V + + + A + PD V+RAA SL LR Sbjct: 16 APFRVLLE---TQRADCVRQRELALAETATSMPDLVTVNRAA-----SL-LRT------- 59 Query: 96 IKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCK 139 I++IE L+++ +G C CG + RLE RP A C+ C+ Sbjct: 60 IEEIEAALERIAAGTYGTCVRCGSAVPAERLEFRPFAAACVSCQ 103 >UniRef50_A0LSA0 Transcriptional regulators, TraR/DksA family n=1 Tax=Acidothermus cellulolyticus 11B RepID=A0LSA0_ACIC1 Length = 113 Score = 42.0 bits (97), Expect = 0.006, Method: Compositional matrix adjust. Identities = 30/107 (28%), Positives = 53/107 (49%), Gaps = 13/107 (12%) Query: 41 RRILEAWRNQLRDEVDRTVTHMQDEAANFPDPVDRAAQEEEFSLELRNRDRERKLI---- 96 RR LE +L D+ T+++ + E+ P D A L+L + R L+ Sbjct: 7 RRQLEEMLAEL-DKSLATLSNQRPESEGHGTPGDADA-----GLDLADHARATALLEVAQ 60 Query: 97 ---KKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKT 140 +++ + L+++E+ +G C SCG + RLEA+P A C+ C+ Sbjct: 61 EQRRQVLEALQRIENGTYGLCVSCGAPLPEGRLEAKPEAARCLSCQA 107 >UniRef50_A0AZX7 Transcriptional regulators, TraR/DksA family n=38 Tax=Burkholderia RepID=A0AZX7_BURCH Length = 130 Score = 42.0 bits (97), Expect = 0.006, Method: Compositional matrix adjust. Identities = 18/50 (36%), Positives = 29/50 (58%) Query: 96 IKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAEIR 145 ++ I + +++ D +G C C +G RL ARPTA+ C C++L E R Sbjct: 72 LRAIGRAQQRMRDGSYGECIDCDGSVGYERLLARPTAERCTHCQSLYERR 121 >UniRef50_B9L783 Transcriptional regulator, TraR/DksA family n=1 Tax=Nautilia profundicola AmH RepID=B9L783_NAUPA Length = 117 Score = 42.0 bits (97), Expect = 0.006, Method: Compositional matrix adjust. Identities = 32/101 (31%), Positives = 49/101 (48%), Gaps = 8/101 (7%) Query: 44 LEAWRNQLRDEV-DRTVTHMQDEAANFPDPVDRAAQEEEFSLELRNRDRERKLIKKIEKT 102 LE N L DE+ D + DEA D AA + + + ++K +++I Sbjct: 20 LEKILNSLSDEIKDINKCEINDEA-------DFAAASMDSGRDYQIYINQKKELEEINDA 72 Query: 103 LKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAE 143 LKK+++ FG CE C I RL+ +P A CI C+ + E Sbjct: 73 LKKIDEGTFGICEMCEDPIQEARLKIKPYAKYCIICREIIE 113 >UniRef50_B0VG86 Putative uncharacterized protein n=1 Tax=Candidatus Cloacamonas acidaminovorans RepID=B0VG86_9BACT Length = 148 Score = 41.6 bits (96), Expect = 0.007, Method: Compositional matrix adjust. Identities = 19/50 (38%), Positives = 30/50 (60%) Query: 90 DRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCK 139 + ER+ I+++ + L+++ D +G CE CG I RLE P A C+ CK Sbjct: 87 ESEREKIRQLNEALQRISDGTYGICEFCGEFIQENRLEIIPYATCCVACK 136 >UniRef50_B6R7R7 Transcriptional regulator, TraR/DksA family n=1 Tax=Pseudovibrio sp. JE062 RepID=B6R7R7_9RHOB Length = 118 Score = 41.6 bits (96), Expect = 0.008, Method: Compositional matrix adjust. Identities = 19/54 (35%), Positives = 34/54 (62%), Gaps = 1/54 (1%) Query: 88 NRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTL 141 +R R R+L ++I+ L+++++E++G+C CG +I RL P A C+ C L Sbjct: 64 DRQRAREL-QRIDGALQRIKEEEYGFCLECGEDIPEARLRVDPAALYCVSCAKL 116 >UniRef50_C5C3L5 Transcriptional regulator, TraR/DksA family n=1 Tax=Beutenbergia cavernae DSM 12333 RepID=C5C3L5_BEUC1 Length = 111 Score = 41.6 bits (96), Expect = 0.009, Method: Compositional matrix adjust. Identities = 17/42 (40%), Positives = 24/42 (57%) Query: 97 KKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDC 138 ++++ L ++ED G CE CG I RLE RP A C+ C Sbjct: 69 EELDAALARIEDGTHGVCERCGRPIPAARLEVRPAARTCVGC 110 >UniRef50_C4KZG3 Transcriptional regulator, TraR/DksA family n=2 Tax=Exiguobacterium RepID=C4KZG3_EXISA Length = 183 Score = 41.6 bits (96), Expect = 0.009, Method: Compositional matrix adjust. Identities = 31/112 (27%), Positives = 57/112 (50%), Gaps = 12/112 (10%) Query: 32 MNEAQLAHFRRILEAWRNQLRDEVD-RTVTHMQDEAANFPD-PVDRAAQEEEFSLELRNR 89 + E Q+ F++ L + + +D R T+ + E +++ + P D + L LR R Sbjct: 4 LTEEQIETFKKRLLKEKAKTEGYMDSREETYDEGELSHYDNHPADSGEE-----LFLRER 58 Query: 90 DR-----ERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCI 136 D+ + + + ++K L +++ +G CE CG +I + RLE P A LCI Sbjct: 59 DQALNELDEEFLSDVDKALLAIQNGTYGKCEVCGKDIELDRLEVIPEATLCI 110 >UniRef50_C6J3C7 DnaK suppressor protein n=2 Tax=Bacillales RepID=C6J3C7_9BACL Length = 245 Score = 41.2 bits (95), Expect = 0.009, Method: Compositional matrix adjust. Identities = 16/42 (38%), Positives = 24/42 (57%) Query: 96 IKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCID 137 + ++E L+++ED +GYC +CG I RL A P C D Sbjct: 77 LARVEDALERIEDGSYGYCATCGKPISYERLRAIPETAYCKD 118 >UniRef50_A8V318 Putative uncharacterized protein n=1 Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8V318_9AQUI Length = 133 Score = 41.2 bits (95), Expect = 0.009, Method: Compositional matrix adjust. Identities = 28/83 (33%), Positives = 44/83 (53%), Gaps = 1/83 (1%) Query: 56 DRTVTHMQDEAANFP-DPVDRAAQEEEFSLELRNRDRERKLIKKIEKTLKKVEDEDFGYC 114 + T+ +Q+E N P D D A L + E +++KKI++ L+++ + +GYC Sbjct: 9 ENTLKRLQEEGLNIPQDREDYARITNYEFLLDELEEIEVEILKKIDEALERISEGTYGYC 68 Query: 115 ESCGVEIGIRRLEARPTADLCID 137 E CG I RLEA P LC + Sbjct: 69 EVCGKPIEEERLEAIPWTTLCTE 91 >UniRef50_Q3JAV6 Putative uncharacterized protein n=2 Tax=Nitrosococcus oceani RepID=Q3JAV6_NITOC Length = 132 Score = 41.2 bits (95), Expect = 0.010, Method: Compositional matrix adjust. Identities = 17/48 (35%), Positives = 26/48 (54%) Query: 96 IKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAE 143 I+ IE+ L + ++G C C +I +RL+ PT C DC+T E Sbjct: 74 IRNIEQALMRFPKGNYGICIDCNTDIDYQRLQINPTVKRCFDCQTRHE 121 >UniRef50_Q2NBT1 Putative uncharacterized protein n=1 Tax=Erythrobacter litoralis HTCC2594 RepID=Q2NBT1_ERYLH Length = 104 Score = 41.2 bits (95), Expect = 0.010, Method: Compositional matrix adjust. Identities = 19/46 (41%), Positives = 26/46 (56%) Query: 93 RKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDC 138 R I+++ L ++E+ +G C CG I RLEARP A CI C Sbjct: 58 RAEIQQVRYALARIENGSYGTCAKCGEPIPKERLEARPIATRCIKC 103 >UniRef50_B3ES66 Putative uncharacterized protein n=1 Tax=Candidatus Amoebophilus asiaticus 5a2 RepID=B3ES66_AMOA5 Length = 138 Score = 41.2 bits (95), Expect = 0.010, Method: Compositional matrix adjust. Identities = 34/106 (32%), Positives = 53/106 (50%), Gaps = 8/106 (7%) Query: 31 YMNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAANFPDPVDRAAQEEEFSLE----L 86 YM++ +A+F++ L L E + + D + V+ + Q EE SLE L Sbjct: 22 YMSDNMVAYFKQKLNKKLEDLIKEEELIAINKADGPRREAEYVENS-QIEELSLEENLPL 80 Query: 87 RNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTA 132 +N D L +++E L ++ +GYCE G IG+RRL A P A Sbjct: 81 QNEDF---LKREVEDALYRINLGTYGYCEETGDPIGVRRLLAFPMA 123 >UniRef50_A9AKZ2 Transcriptional regulator, TraR/DksA family n=5 Tax=Burkholderia multivorans RepID=A9AKZ2_BURM1 Length = 256 Score = 41.2 bits (95), Expect = 0.010, Method: Compositional matrix adjust. Identities = 18/50 (36%), Positives = 28/50 (56%) Query: 96 IKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAEIR 145 ++ I + +++ D +G C C +G RL ARPTA+ C C+ L E R Sbjct: 198 LRAIRRAQQRMVDGSYGDCIDCDGPVGYARLRARPTAERCTHCQALYERR 247 >UniRef50_D1ACI4 Transcriptional regulator, TraR/DksA family n=2 Tax=Streptosporangineae RepID=D1ACI4_THECD Length = 121 Score = 41.2 bits (95), Expect = 0.011, Method: Compositional matrix adjust. Identities = 24/81 (29%), Positives = 38/81 (46%), Gaps = 10/81 (12%) Query: 60 THMQDEAANFPDPVDRAAQEEEFSLELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGV 119 H D A+ D A++ + +LE R R+ + L+++ +G C +CG Sbjct: 44 AHPADVGAHLSD-----AEQADAALE-----RLRRQRNSVLAALQRIAAGTYGRCVTCGK 93 Query: 120 EIGIRRLEARPTADLCIDCKT 140 I RLEARP A C+ C+ Sbjct: 94 PIAAGRLEARPDAARCLTCQA 114 >UniRef50_C6D536 Transcriptional regulator, TraR/DksA family n=2 Tax=Paenibacillus RepID=C6D536_PAESJ Length = 234 Score = 41.2 bits (95), Expect = 0.011, Method: Compositional matrix adjust. Identities = 33/127 (25%), Positives = 57/127 (44%), Gaps = 9/127 (7%) Query: 33 NEAQLAHFRRILEAWRNQL-----RDEVDRTVTHMQDEAANFP----DPVDRAAQEEEFS 83 N QLA R LEA + ++ R+E + + ++D P D + E S Sbjct: 3 NATQLAQLRNRLEAEKREIEERQSRNEHNGLASSLRDNTGELSPIDNHPADLGTELFERS 62 Query: 84 LELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAE 143 +L + E + +I + L+ +++ +G C +CG I RLEA P + C++ E Sbjct: 63 KDLALLENEDLHLTRISQALEAMDNGTYGQCRACGKPIPDERLEALPDSLYCVEHAPRQE 122 Query: 144 IREKQMA 150 +Q A Sbjct: 123 TSHRQPA 129 >UniRef50_Q12E87 Transcriptional regulators, TraR/DksA family n=1 Tax=Polaromonas sp. JS666 RepID=Q12E87_POLSJ Length = 134 Score = 41.2 bits (95), Expect = 0.011, Method: Compositional matrix adjust. Identities = 35/132 (26%), Positives = 59/132 (44%), Gaps = 13/132 (9%) Query: 30 EYMNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAA-----NFPDPVDRAAQEEEFSL 84 E + +Q FR +L +LR V R + DEAA + D D A ++ ++ Sbjct: 2 ETYDSSQAPRFRLLLTQREAELR-AVLRAAGSLSDEAAESESHDVTDFKDVATEQSLATV 60 Query: 85 ELRNRDRERKLIKKIEKTLKKVEDED------FGYCESCGVEIGIRRLEARPTADLCIDC 138 D ++++ L++++D +G+C CG I +RRL A P C C Sbjct: 61 ADAKVDHAAHELEQVLAALRRLDDATNGKSPGYGHCLDCGEAIDLRRLAALPATPYCTAC 120 Query: 139 KTLAEIREKQMA 150 + + E E+Q A Sbjct: 121 QAIHE-HERQPA 131 >UniRef50_C1SL94 DnaK suppressor protein n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SL94_9BACT Length = 113 Score = 41.2 bits (95), Expect = 0.011, Method: Compositional matrix adjust. Identities = 29/112 (25%), Positives = 55/112 (49%), Gaps = 9/112 (8%) Query: 32 MNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAANF-PD-PVDRAAQEEEF---SLEL 86 M + QLA ++ I+E +L++ T+ M + PD + R ++ E S+ Sbjct: 1 MTDGQLAEYKIIVEKQIEELKE----TIASMAESVRPIEPDTAIGRLSRMEAIQAKSISE 56 Query: 87 RNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDC 138 N +R ++++E L ++ FG C C +I +RL+ P + +C+DC Sbjct: 57 SNLRNKRMRLQRLEAALLRIARGSFGLCSVCEEDIPEKRLKIAPESTVCMDC 108 >UniRef50_B8H9G6 Transcriptional regulator, TraR/DksA family n=3 Tax=Micrococcineae RepID=B8H9G6_ARTCA Length = 118 Score = 41.2 bits (95), Expect = 0.011, Method: Compositional matrix adjust. Identities = 17/42 (40%), Positives = 23/42 (54%) Query: 96 IKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCID 137 + ++E L ++ D +G C CG I RLEARP CID Sbjct: 70 LDQVEAALTRIADGTYGSCAVCGRPIAEGRLEARPWTPYCID 111 >UniRef50_A4G7K6 Putative uncharacterized protein n=1 Tax=Herminiimonas arsenicoxydans RepID=A4G7K6_HERAR Length = 106 Score = 40.8 bits (94), Expect = 0.012, Method: Compositional matrix adjust. Identities = 18/52 (34%), Positives = 27/52 (51%) Query: 96 IKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAEIREK 147 + IE +++++ +G C CG I RL+A PTA C C+ L E R Sbjct: 55 LADIEAAHRRIDNHQYGLCIDCGCTIDYARLQASPTAKRCTQCQRLHEQRHH 106 >UniRef50_A9DDI2 DnaK suppressor protein, putative n=2 Tax=Rhizobiales RepID=A9DDI2_9RHIZ Length = 110 Score = 40.8 bits (94), Expect = 0.012, Method: Compositional matrix adjust. Identities = 19/52 (36%), Positives = 32/52 (61%), Gaps = 1/52 (1%) Query: 89 RDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKT 140 R R+R L++ IE +++ D ++G+C CG I +RLE P A+ C+ C + Sbjct: 60 RARKRDLVR-IEMAERRLADGEYGFCAECGEPIAGKRLEIDPMAEKCVRCAS 110 >UniRef50_Q1IQ14 Serine phosphatase n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1IQ14_ACIBL Length = 341 Score = 40.8 bits (94), Expect = 0.012, Method: Compositional matrix adjust. Identities = 17/53 (32%), Positives = 29/53 (54%) Query: 94 KLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAEIRE 146 L+ +++ L K+E +FG C++C I + R+ A P C+ C T A+ R Sbjct: 37 HLLHDVDQALAKLETGNFGVCQNCHESIEVDRVMADPLVTFCLGCLTPAQQRS 89 >UniRef50_A1WBE4 Transcriptional regulator, TraR/DksA family n=3 Tax=Comamonadaceae RepID=A1WBE4_ACISJ Length = 150 Score = 40.8 bits (94), Expect = 0.012, Method: Compositional matrix adjust. Identities = 17/38 (44%), Positives = 23/38 (60%) Query: 108 DEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAEIR 145 D +G C CG +G+ RL A+P A CI C++ AE R Sbjct: 110 DGSYGECTDCGQPVGVARLLAQPAAARCIACQSKAEAR 147 >UniRef50_Q02C95 Transcriptional regulator, TraR/DksA family n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q02C95_SOLUE Length = 128 Score = 40.8 bits (94), Expect = 0.012, Method: Compositional matrix adjust. Identities = 20/61 (32%), Positives = 35/61 (57%), Gaps = 1/61 (1%) Query: 79 EEEFSLELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDC 138 +EF + LR + + ++ +E+ L ++E DFG C +C I +RL+A P A C+ C Sbjct: 52 HDEF-VSLRMNGLDYRQLRMVEEALDRLESGDFGICLACDESIAEKRLQALPWARYCVKC 110 Query: 139 K 139 + Sbjct: 111 Q 111 >UniRef50_UPI00016C3CE0 transcriptional regulators, TraR/DksA family protein n=1 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C3CE0 Length = 253 Score = 40.8 bits (94), Expect = 0.013, Method: Compositional matrix adjust. Identities = 33/121 (27%), Positives = 52/121 (42%), Gaps = 19/121 (15%) Query: 32 MNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEA------------ANFPDPVDRAAQE 79 MN + ++R LE ++ D V RT +++E +N P + Sbjct: 1 MNSRKTNQYKRQLE----KIADRVGRTAAALEEEVRMPLGGESAGGMSNAPLHLGDLGTH 56 Query: 80 EEFSLELRNR--DRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCID 137 FS EL + E L + L +++D FG C SCG ++G RL+A P C+ Sbjct: 57 A-FSQELDTTLLENETYLRDEAVAALGRIDDGTFGRCTSCGGDVGEERLDALPYVRQCVA 115 Query: 138 C 138 C Sbjct: 116 C 116 >UniRef50_Q020R1 Serine phosphatase n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q020R1_SOLUE Length = 328 Score = 40.8 bits (94), Expect = 0.013, Method: Compositional matrix adjust. Identities = 21/54 (38%), Positives = 28/54 (51%) Query: 95 LIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAEIREKQ 148 LI +I+ L ++E FG CESC I RL P C+D + AE+R Q Sbjct: 38 LIAEIDAALARIEHGQFGICESCHDSIEQDRLAHNPLIRFCLDHLSQAELRAHQ 91 >UniRef50_B7S312 Putative uncharacterized protein n=1 Tax=marine gamma proteobacterium HTCC2148 RepID=B7S312_9GAMM Length = 107 Score = 40.8 bits (94), Expect = 0.013, Method: Compositional matrix adjust. Identities = 17/46 (36%), Positives = 26/46 (56%) Query: 93 RKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDC 138 R+ + I+ L K+ D +G CE CG I RL+A P ++ C+ C Sbjct: 60 RQSLHAIQVALDKIADGTYGDCEKCGANIEAGRLQAIPESNCCMSC 105 >UniRef50_A3IED4 DnaK suppressor protein n=2 Tax=Bacillaceae RepID=A3IED4_9BACI Length = 150 Score = 40.8 bits (94), Expect = 0.013, Method: Compositional matrix adjust. Identities = 28/106 (26%), Positives = 51/106 (48%), Gaps = 1/106 (0%) Query: 32 MNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAANFPD-PVDRAAQEEEFSLELRNRD 90 M++ + +R LE ++ +D + E +N+ + P D A+ + E+ + Sbjct: 1 MDQQVMQKLKRQLEQELQEIEKRIDESERPQATELSNYDNHPADNASDLTDQLTEMAIDE 60 Query: 91 RERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCI 136 ++I++ L+ + D +G C CG EI I RLEA P A C+ Sbjct: 61 HRGDNAEEIKEALQAMADGTYGECTVCGKEIPIGRLEAMPQALTCV 106 >UniRef50_P80872 General stress protein 16O n=2 Tax=Bacillus subtilis group RepID=G16O_BACSU Length = 163 Score = 40.8 bits (94), Expect = 0.013, Method: Compositional matrix adjust. Identities = 17/48 (35%), Positives = 32/48 (66%) Query: 92 ERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCK 139 +R+L++++ + L+K++D +G CE G EI RLEA P A + ++ + Sbjct: 67 DRELLEEVNRALQKMKDGTYGVCEKTGQEIPYERLEAVPYARMTVEAQ 114 >UniRef50_C9YVQ5 Putative uncharacterized protein n=1 Tax=Streptomyces scabiei 87.22 RepID=C9YVQ5_STRSW Length = 132 Score = 40.8 bits (94), Expect = 0.013, Method: Compositional matrix adjust. Identities = 19/64 (29%), Positives = 31/64 (48%) Query: 76 AAQEEEFSLELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLC 135 A QE L RD +++K+I+ +V++ +G C C I + RLE P C Sbjct: 65 AGQEAGEQLMPGQRDTIERVLKEIDAAFVRVQEHTYGTCLGCSKPIPVERLEILPYTRFC 124 Query: 136 IDCK 139 + C+ Sbjct: 125 VPCR 128 >UniRef50_A6FXL2 DnaK suppressor protein, putative n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6FXL2_9DELT Length = 132 Score = 40.8 bits (94), Expect = 0.013, Method: Compositional matrix adjust. Identities = 31/110 (28%), Positives = 52/110 (47%), Gaps = 5/110 (4%) Query: 30 EYMNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAANFPDPVDRAAQEEEFSLE---L 86 ++++E QLA R LE + +L + + + + + D V+ A EE + L Sbjct: 2 DHLSEQQLAGLRTKLETEQAELSERIASSTSVVADNLDPGRGDVEDQAAEEAGRFQAKQL 61 Query: 87 RNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCI 136 RDR R + ++E L +V + ++G CE I RRLE PT + Sbjct: 62 LTRDRAR--LAEVEAALSRVAEGEYGICEESDEPIPFRRLELEPTTRYTV 109 >UniRef50_C9S0U4 Transcriptional regulator, TraR/DksA family n=14 Tax=Bacillaceae RepID=C9S0U4_GEOSY Length = 269 Score = 40.8 bits (94), Expect = 0.014, Method: Compositional matrix adjust. Identities = 37/114 (32%), Positives = 57/114 (50%), Gaps = 11/114 (9%) Query: 32 MNEAQLAHFR-RILEAWR---NQLR--DEVDRTVTHMQD---EAANFPD-PVDRAAQEEE 81 MNE QLA R R+L+ R ++L+ D +H D E A++ + P D A + E Sbjct: 3 MNE-QLAALRSRLLDMKRETEDRLKQNDHFGMIRSHAHDAVGELASYDNHPADEATELYE 61 Query: 82 FSLELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLC 135 +L ++ + +++IE+ L + D +G C CG I RLEA PT C Sbjct: 62 REKDLALKEHAERELREIERALGAIADGTYGTCRVCGRPIPYERLEALPTTLYC 115 >UniRef50_B4D0A5 Transcriptional regulator, TraR/DksA family n=2 Tax=Verrucomicrobia RepID=B4D0A5_9BACT Length = 233 Score = 40.8 bits (94), Expect = 0.014, Method: Compositional matrix adjust. Identities = 22/64 (34%), Positives = 38/64 (59%), Gaps = 2/64 (3%) Query: 77 AQEEEFSLELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCI 136 A + +F+L L ++ E+ + +IE+ LK++E +G CE G I RLEA P A + Sbjct: 132 AYDRDFALSLLSQ--EQDALYEIEEALKRIELGTYGVCEMSGKPIAHPRLEALPFARYTV 189 Query: 137 DCKT 140 +C++ Sbjct: 190 ECQS 193 >UniRef50_C9NIY3 Transcriptional regulator, TraR/DksA family n=3 Tax=Streptomyces RepID=C9NIY3_9ACTO Length = 131 Score = 40.8 bits (94), Expect = 0.015, Method: Compositional matrix adjust. Identities = 18/48 (37%), Positives = 28/48 (58%) Query: 91 RERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDC 138 R R + ++++ L+++E D+G CE C I RLE RP A C+ C Sbjct: 78 RARDHLAEVDRALERLERGDYGRCERCREPIPPGRLEVRPAATTCVRC 125 >UniRef50_B2UIX3 Transcriptional regulator, TraR/DksA family n=6 Tax=Ralstonia RepID=B2UIX3_RALPJ Length = 120 Score = 40.8 bits (94), Expect = 0.015, Method: Compositional matrix adjust. Identities = 18/55 (32%), Positives = 31/55 (56%) Query: 91 RERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAEIR 145 R R ++++ ++++ +G C CG I RL+A+PTA C+ C+T E R Sbjct: 64 RYRSELEQLNAARERMQQHSYGICVDCGEAIPFLRLQAQPTAMRCLPCQTACERR 118 >UniRef50_C0QJK4 DksA2 n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QJK4_DESAH Length = 114 Score = 40.4 bits (93), Expect = 0.016, Method: Compositional matrix adjust. Identities = 17/48 (35%), Positives = 25/48 (52%) Query: 91 RERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDC 138 R R + K+E+ L ++ DFG C +C I RL P +LC+ C Sbjct: 61 RARITLSKLERALARIGSPDFGLCSACEEPIPFARLMILPETELCVKC 108 >UniRef50_B8FAI8 Transcriptional regulator, TraR/DksA family n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FAI8_DESAA Length = 112 Score = 40.4 bits (93), Expect = 0.017, Method: Compositional matrix adjust. Identities = 16/38 (42%), Positives = 22/38 (57%) Query: 101 KTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDC 138 + L + D DFGYC C EI I R+ P +D+C+ C Sbjct: 71 RALDNIGDPDFGYCAICDEEIPIGRIMLVPESDVCVKC 108 >UniRef50_D0D572 Transcriptional regulator, TraR/DksA family n=1 Tax=Citreicella sp. SE45 RepID=D0D572_9RHOB Length = 130 Score = 40.4 bits (93), Expect = 0.017, Method: Compositional matrix adjust. Identities = 17/43 (39%), Positives = 27/43 (62%) Query: 96 IKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDC 138 I +IE L+++++ ++GYC +CG I RL+ P A LC C Sbjct: 82 IGRIEAALRRMDEGEYGYCLTCGEAISEARLDILPDAPLCAAC 124 >UniRef50_A1RF16 Transcriptional regulator, TraR/DksA family n=2 Tax=Shewanella RepID=A1RF16_SHESW Length = 110 Score = 40.4 bits (93), Expect = 0.018, Method: Compositional matrix adjust. Identities = 18/56 (32%), Positives = 31/56 (55%) Query: 84 LELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCK 139 +EL R++ ++ IE L ++ +++G C CG +I + RL PT CI+C Sbjct: 55 MELETARRKQHQLQVIEGALLRINSDEYGSCFVCGEDIDLNRLMFDPTVTRCINCS 110 >UniRef50_C8XJQ6 Transcriptional regulator, TraR/DksA family n=1 Tax=Nakamurella multipartita DSM 44233 RepID=C8XJQ6_NAKMY Length = 117 Score = 40.4 bits (93), Expect = 0.018, Method: Compositional matrix adjust. Identities = 20/68 (29%), Positives = 35/68 (51%), Gaps = 1/68 (1%) Query: 71 DPVDRAAQEEEFSLELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARP 130 DP E F ++ +R +++ ++ +++ L ++ +G CE CG I RL A P Sbjct: 47 DPEGSPLSGEWFRIDGMHRAAQQR-VRDVDEALAALDAGRYGICERCGCAIAAGRLAALP 105 Query: 131 TADLCIDC 138 TA C+ C Sbjct: 106 TATRCVSC 113 >UniRef50_Q5WGI4 General stress protein GSP160 n=1 Tax=Bacillus clausii KSM-K16 RepID=Q5WGI4_BACSK Length = 174 Score = 40.4 bits (93), Expect = 0.018, Method: Compositional matrix adjust. Identities = 28/106 (26%), Positives = 52/106 (49%), Gaps = 5/106 (4%) Query: 32 MNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAANFPDPVDR-----AAQEEEFSLEL 86 ++E QLAH + L +++L + RT M D + D A++ E+ ++ Sbjct: 3 LSEKQLAHLKHKLLEMKDELETKKRRTTGEMSDSRGDIARGADNHIGETASEYEDRVIQQ 62 Query: 87 RNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTA 132 + ++K ++ I + L+++E+ +G C G I RLEA P A Sbjct: 63 SLNEADQKRLQDITEALERIEEGTYGICIDTGQPIPYERLEALPYA 108 >UniRef50_A1SZ57 Transcriptional regulator, TraR/DksA family protein n=1 Tax=Psychromonas ingrahamii 37 RepID=A1SZ57_PSYIN Length = 115 Score = 40.4 bits (93), Expect = 0.018, Method: Compositional matrix adjust. Identities = 17/40 (42%), Positives = 25/40 (62%) Query: 99 IEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDC 138 +E+ LK++E + +G C C +I + RLE PTA CI C Sbjct: 70 VEQALKRLEKQIYGICVDCDEDINVHRLEIDPTAIRCIKC 109 >UniRef50_A3X4N5 DnaK suppressor protein n=5 Tax=Rhodobacterales RepID=A3X4N5_9RHOB Length = 104 Score = 40.4 bits (93), Expect = 0.019, Method: Compositional matrix adjust. Identities = 14/45 (31%), Positives = 26/45 (57%) Query: 96 IKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKT 140 +++I+ L ++ + +GYC+ CG EI +RL+ P C C + Sbjct: 60 VRQIDAALARLVEGSYGYCQICGDEIAAKRLDLVPATPFCSGCAS 104 >UniRef50_B4UII3 Transcriptional regulator, TraR/DksA family n=4 Tax=Anaeromyxobacter RepID=B4UII3_ANASK Length = 144 Score = 40.0 bits (92), Expect = 0.021, Method: Compositional matrix adjust. Identities = 19/62 (30%), Positives = 37/62 (59%), Gaps = 1/62 (1%) Query: 77 AQEEEFSLELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCI 136 A+ E+++L ++ R+L++ I+ + +++ ++G C C +I RRL A P A LC Sbjct: 66 AEHEQYTLARLGENQRRELVQ-IDAAIARIDAGEYGICRDCEQDIDPRRLAALPYAVLCT 124 Query: 137 DC 138 +C Sbjct: 125 EC 126 >UniRef50_D1SGF0 Transcriptional regulator, TraR/DksA family n=1 Tax=Micromonospora aurantiaca ATCC 27029 RepID=D1SGF0_9ACTO Length = 103 Score = 40.0 bits (92), Expect = 0.021, Method: Compositional matrix adjust. Identities = 16/47 (34%), Positives = 27/47 (57%) Query: 93 RKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCK 139 R+ + + LK++ + +G CE CG +I RLE P+A C+ C+ Sbjct: 54 RQGVADTAQALKRMSEGTYGVCERCGQDIPTARLEILPSARFCVPCQ 100 >UniRef50_D0MD16 Transcriptional regulator, TraR/DksA family n=2 Tax=Rhodothermaceae RepID=D0MD16_RHOM4 Length = 149 Score = 40.0 bits (92), Expect = 0.023, Method: Compositional matrix adjust. Identities = 32/148 (21%), Positives = 69/148 (46%), Gaps = 17/148 (11%) Query: 2 QEGQNRKTSSLSILAIAGVEPYQEKPGEEYMNEAQLAHFRRILEAWRNQLRDEVDRTVTH 61 E ++ T + A EP + P + +L +FR+++ R Q ++++R Sbjct: 5 HEQEHNATPNPEASAQEAAEPVRRTP----FTDEELEYFRQLILEKRRQAVEDIERMKAQ 60 Query: 62 MQDE----------AANFPDPVDRAAQEEEFSLELRNRDRERKLIKKIEKTLKKVEDEDF 111 ++D + + D A + E+ L + R++K I +++ L++++++ + Sbjct: 61 LEDAREQGGTDTAYSFHMADAGTDAMEREKLFLMI---ARQQKYISHLDRALERIKNKTY 117 Query: 112 GYCESCGVEIGIRRLEARPTADLCIDCK 139 G C+ G I RLEA P ++ I+ K Sbjct: 118 GICKVTGKPIPRERLEAVPHTEVSIEAK 145 >UniRef50_Q0AHN9 Transcriptional regulators, TraR/DksA family protein n=3 Tax=Proteobacteria RepID=Q0AHN9_NITEC Length = 135 Score = 40.0 bits (92), Expect = 0.025, Method: Compositional matrix adjust. Identities = 30/119 (25%), Positives = 56/119 (47%), Gaps = 9/119 (7%) Query: 29 EEYMNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAANFPDPVDRAAQEEEFSLELRN 88 E + + Q+ HF + ++A ++ L E+ + + ++E + D + A + + Sbjct: 5 ENSLTKEQITHFAQRIDARKSLLLGEIRQVLARSRNE--YYVDLIGGAGDSGDTATASLL 62 Query: 89 RD-RERKLIKKIEKTLKKVEDED------FGYCESCGVEIGIRRLEARPTADLCIDCKT 140 RD E ++I+ I + V ED +G C CG + +RL+A PTA C C+ Sbjct: 63 RDITEAEVIRDIGEVRDIVAAEDRIATGKYGLCIDCGEPVRYKRLDAYPTAKRCFTCQV 121 >UniRef50_UPI0001C4239D hypothetical protein BpOF4_09730 n=1 Tax=Bacillus pseudofirmus OF4 RepID=UPI0001C4239D Length = 215 Score = 39.7 bits (91), Expect = 0.028, Method: Compositional matrix adjust. Identities = 22/59 (37%), Positives = 32/59 (54%), Gaps = 7/59 (11%) Query: 81 EFSLELRNRDRERKL-------IKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTA 132 + + EL +R+ E L +++I + L +ED +G CE CG I RLEA PTA Sbjct: 53 DLATELHDRELEAALDQHSKDELEEINQALAAIEDGTYGICEVCGEPIPFERLEALPTA 111 >UniRef50_A7HEW6 Transcriptional regulator, TraR/DksA family n=4 Tax=Anaeromyxobacter RepID=A7HEW6_ANADF Length = 130 Score = 39.7 bits (91), Expect = 0.029, Method: Compositional matrix adjust. Identities = 36/126 (28%), Positives = 51/126 (40%), Gaps = 20/126 (15%) Query: 32 MNEAQLAHFRRILEAWRNQL---------RDEVDRTVTHMQDEAANFPDPVDRAAQEEEF 82 M Q A + LE R +L + D T + DE D A E Sbjct: 1 MTPKQRATLKNTLERLRAELVRAGPAKIQPNRTDAATTGVADE--------DAQALSEML 52 Query: 83 SLELRNRDR-ERKLIKKIEKTLKKVED--EDFGYCESCGVEIGIRRLEARPTADLCIDCK 139 + R++ + +L+ +I++ L K+ EDFG CE C EI RL P A C C+ Sbjct: 53 QVLASQRNKGQAELVARIDRALAKLASAPEDFGLCEDCEEEIAPGRLAVMPYATRCPACQ 112 Query: 140 TLAEIR 145 E R Sbjct: 113 AKTEPR 118 >UniRef50_A1B0I3 Transcriptional regulator, TraR/DksA family n=9 Tax=Rhodobacterales RepID=A1B0I3_PARDP Length = 106 Score = 39.7 bits (91), Expect = 0.030, Method: Compositional matrix adjust. Identities = 24/91 (26%), Positives = 43/91 (47%), Gaps = 9/91 (9%) Query: 50 QLRDEVDRTVTHMQDEAANFPDPVDRAAQEEEFSLELRNRDRERKLIKKIEKTLKKVEDE 109 +RD++D + D+AA QE++ L+ + +L +I+ L++++ Sbjct: 23 NIRDQLDDPLPQDWDDAA--------IEQEDDEVLQALGHAHQAEL-NRIDAALRRIDSG 73 Query: 110 DFGYCESCGVEIGIRRLEARPTADLCIDCKT 140 D+G+C CG I RL+ P LC C Sbjct: 74 DYGFCAGCGDVILPARLDLLPDTPLCAHCAA 104 >UniRef50_D2B0C3 Transcriptional regulator, TraR/DksA family n=1 Tax=Streptosporangium roseum DSM 43021 RepID=D2B0C3_STRRD Length = 110 Score = 39.7 bits (91), Expect = 0.031, Method: Compositional matrix adjust. Identities = 15/44 (34%), Positives = 26/44 (59%) Query: 96 IKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCK 139 + + + L+ V + +G C+ CG+ I RL+ARP A C+ C+ Sbjct: 61 LAVVRQALRDVTELTYGRCDGCGLAIPFERLKARPLARFCMLCQ 104 >UniRef50_C6E710 Transcriptional regulator, TraR/DksA family n=3 Tax=Geobacter RepID=C6E710_GEOSM Length = 130 Score = 39.7 bits (91), Expect = 0.031, Method: Compositional matrix adjust. Identities = 18/50 (36%), Positives = 28/50 (56%) Query: 90 DRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCK 139 D R + +E+ ++VE +G CE+CG I I+RL P A C+ C+ Sbjct: 67 DIRRNQLTALEEAQRRVEQGTYGKCENCGEVIDIQRLRLMPFAAYCVSCQ 116 >UniRef50_A4FJQ8 Putative uncharacterized protein n=1 Tax=Saccharopolyspora erythraea NRRL 2338 RepID=A4FJQ8_SACEN Length = 56 Score = 39.7 bits (91), Expect = 0.032, Method: Compositional matrix adjust. Identities = 16/47 (34%), Positives = 27/47 (57%) Query: 93 RKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCK 139 R+ + IE L ++ D +G C +CG +I ++ L A P LC+ C+ Sbjct: 6 RRALADIEVALARMRDGMYGLCRACGSDIPLQLLTAIPKTTLCLSCQ 52 >UniRef50_B9XR79 Transcriptional regulator, TraR/DksA family n=1 Tax=bacterium Ellin514 RepID=B9XR79_9BACT Length = 192 Score = 39.7 bits (91), Expect = 0.034, Method: Compositional matrix adjust. Identities = 37/141 (26%), Positives = 62/141 (43%), Gaps = 18/141 (12%) Query: 7 RKTSSLSILAIAGVEPYQEKPGEEYMNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEA 66 R ++ SIL + + +K GE + +++ +LE R QL ++ E Sbjct: 19 RSATAASILGLPSEK--AKKNGEAKIKPEWAGYYQNLLEL-REQLLKQMSGLAKESAQEL 75 Query: 67 ANFP--------DPVDRAAQEEEFSLELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCG 118 A + D DR +F+L L + D++ I +IE+ LK++E +G CE G Sbjct: 76 AGYSLHMADSGTDNFDR-----DFALSLLSSDQDA--IYEIEEALKRIEKNTYGVCELTG 128 Query: 119 VEIGIRRLEARPTADLCIDCK 139 I RLEA P + + Sbjct: 129 KPIPKARLEAIPWTRFTVQAQ 149 >UniRef50_A1VGY3 Transcriptional regulator, TraR/DksA family n=4 Tax=Desulfovibrio vulgaris RepID=A1VGY3_DESVV Length = 113 Score = 39.3 bits (90), Expect = 0.035, Method: Compositional matrix adjust. Identities = 18/48 (37%), Positives = 28/48 (58%), Gaps = 2/48 (4%) Query: 93 RKLIKKIEKTLKKVEDED--FGYCESCGVEIGIRRLEARPTADLCIDC 138 RK + +E +K++ D+D +GYC CG I RL + P A C++C Sbjct: 64 RKRLAGLEYAVKRLGDDDPEYGYCVECGEAIPFARLMSMPEASRCVNC 111 >UniRef50_D1U5V5 Transcriptional regulator, TraR/DksA family n=1 Tax=Desulfovibrio aespoeensis Aspo-2 RepID=D1U5V5_9DELT Length = 111 Score = 39.3 bits (90), Expect = 0.035, Method: Compositional matrix adjust. Identities = 18/49 (36%), Positives = 29/49 (59%), Gaps = 1/49 (2%) Query: 91 RERKLIKKIEKTLKKVED-EDFGYCESCGVEIGIRRLEARPTADLCIDC 138 + R + ++ + L++V+D EDFG C C I + RL+A P C+DC Sbjct: 61 KTRVRLARLGEALRRVDDDEDFGLCIDCSKPIPMARLKAMPETQYCVDC 109 >UniRef50_Q3J1J5 DnaK suppressor protein n=5 Tax=Rhodobacter RepID=Q3J1J5_RHOS4 Length = 105 Score = 39.3 bits (90), Expect = 0.036, Method: Compositional matrix adjust. Identities = 15/43 (34%), Positives = 24/43 (55%) Query: 96 IKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDC 138 I+ I L +++ +++G+C CG EIG RL+ P C C Sbjct: 61 IRAITAALARIDADEYGFCVKCGAEIGEARLDVLPYTPFCRKC 103 >UniRef50_B2ULP7 Transcriptional regulator, TraR/DksA family n=1 Tax=Akkermansia muciniphila ATCC BAA-835 RepID=B2ULP7_AKKM8 Length = 207 Score = 39.3 bits (90), Expect = 0.038, Method: Compositional matrix adjust. Identities = 24/74 (32%), Positives = 42/74 (56%), Gaps = 2/74 (2%) Query: 77 AQEEEFSLELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCI 136 A + +F+L L ++ E+ + +IE+ L ++++ +G CE I I RLEA P A L + Sbjct: 108 AYDRDFALSLLSK--EQDGLYEIEQALARIDNGTYGICEMSYKVIPILRLEAIPFARLTV 165 Query: 137 DCKTLAEIREKQMA 150 +C+ E + Q A Sbjct: 166 ECQAQWEKEKGQNA 179 >UniRef50_C5RLG0 Transcriptional regulator, TraR/DksA family n=1 Tax=Clostridium cellulovorans 743B RepID=C5RLG0_CLOCL Length = 199 Score = 38.9 bits (89), Expect = 0.046, Method: Compositional matrix adjust. Identities = 23/79 (29%), Positives = 37/79 (46%), Gaps = 1/79 (1%) Query: 72 PVDRAAQEEEFSLELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPT 131 P D A + E + E ++ KI + L +E+ D+G C +C EI RL+ P Sbjct: 51 PSDSATELSEIEKGKALKANETNMLGKINEALDALENGDYGLCGNCQKEITKERLDFLPY 110 Query: 132 ADLCIDCKTLAE-IREKQM 149 A C C+ + +RE+ Sbjct: 111 AKYCAKCQGIMHTLRERTF 129 >UniRef50_Q029W8 Transcriptional regulator, TraR/DksA family n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q029W8_SOLUE Length = 149 Score = 38.9 bits (89), Expect = 0.047, Method: Compositional matrix adjust. Identities = 27/103 (26%), Positives = 47/103 (45%), Gaps = 1/103 (0%) Query: 38 AHFRRILEAWRNQLRDEVDRTVTHMQDEAANFP-DPVDRAAQEEEFSLELRNRDRERKLI 96 A +R+ILE ++R + + P D D + Q E + L + KL+ Sbjct: 26 ATYRKILEKKAEEVRRSMSAQKAAQVVARLDIPSDEGDLSQQHHEEWIFLNRNTIDMKLL 85 Query: 97 KKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCK 139 ++I L +++ +G C C I +RL+A P A C+ C+ Sbjct: 86 REIADALHRMDTGHYGVCPECEEPISAKRLDAVPWARYCVTCQ 128 >UniRef50_D2R2J7 Transcriptional regulator, TraR/DksA family n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2R2J7_9PLAN Length = 148 Score = 38.9 bits (89), Expect = 0.049, Method: Compositional matrix adjust. Identities = 18/52 (34%), Positives = 30/52 (57%) Query: 92 ERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAE 143 E + + I+ L+++ ++G CE C I + RL+A P A +CI C+ AE Sbjct: 63 ESRELAHIDTALERMRSGNYGACEGCNEPIPLLRLQALPYAVMCIKCQREAE 114 >UniRef50_UPI00019074B1 putative DnaK suppressor protein n=1 Tax=Rhizobium etli GR56 RepID=UPI00019074B1 Length = 128 Score = 38.9 bits (89), Expect = 0.052, Method: Compositional matrix adjust. Identities = 24/76 (31%), Positives = 35/76 (46%) Query: 70 PDPVDRAAQEEEFSLELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEAR 129 PD DR Q E + + R I+ I+ L++++ FG C +C I RL+A Sbjct: 50 PDSEDRVTQLENDQVLMEMRREAGAQIQLIDAALERLKHGTFGRCVTCLAPIETARLDAI 109 Query: 130 PTADLCIDCKTLAEIR 145 P C C LA+ R Sbjct: 110 PYTPYCATCARLADER 125 >UniRef50_B8GMT5 Transcriptional regulator, TraR/DksA family n=2 Tax=Gammaproteobacteria RepID=B8GMT5_THISH Length = 132 Score = 38.9 bits (89), Expect = 0.052, Method: Compositional matrix adjust. Identities = 15/44 (34%), Positives = 24/44 (54%) Query: 96 IKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCK 139 ++ +E L ++ + +G C CG I RL+A PTA C C+ Sbjct: 74 VRDVEAALLRIAGQSYGICTDCGDAIAYERLDAYPTAKRCARCQ 117 >UniRef50_Q1D808 DksA-like protein n=3 Tax=Cystobacterineae RepID=Q1D808_MYXXD Length = 130 Score = 38.9 bits (89), Expect = 0.054, Method: Compositional matrix adjust. Identities = 24/60 (40%), Positives = 33/60 (55%), Gaps = 3/60 (5%) Query: 92 ERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAEIREKQMAG 151 +R+ I I+ L++++ FG C CG EI I RLEA P A I C+ A I E + G Sbjct: 66 QRREIMLIDAALRRMDMGVFGECVDCGFEIPIERLEALPFA---IRCEEDASIHELETRG 122 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P0ABS3 DnaK suppressor protein n=247 Tax=Proteobacteria... 199 2e-50 UniRef50_Q89AR3 DnaK suppressor protein homolog n=7 Tax=Gammapro... 189 2e-47 UniRef50_A7K6F3 DnaK suppressor protein (Fragment) n=48 Tax=Vibr... 187 8e-47 UniRef50_P43758 DnaK suppressor protein homolog n=104 Tax=Proteo... 177 8e-44 UniRef50_A7C5U4 Zn-finger, prokaryotic DksA/TraR C4 type n=1 Tax... 163 2e-39 UniRef50_Q21SV6 Transcriptional regulators, TraR/DksA family n=5... 160 1e-38 UniRef50_A8PLZ9 Suppressor protein DksA n=3 Tax=Gammaproteobacte... 158 5e-38 UniRef50_Q5UF45 Predicted DskA family protein n=4 Tax=Bacteria R... 152 5e-36 UniRef50_Q12EM6 Transcriptional regulators, TraR/DksA family n=6... 148 5e-35 UniRef50_Q31G85 Transcriptional regulators, TraR/DksA family n=1... 148 7e-35 UniRef50_B4SQA3 Transcriptional regulator, TraR/DksA family n=35... 147 1e-34 UniRef50_Q6SHS2 DnaK suppressor protein n=1 Tax=uncultured marin... 141 7e-33 UniRef50_A6T2Z9 DnaK suppressor protein n=5 Tax=Betaproteobacter... 140 9e-33 UniRef50_A0LCU1 Transcriptional regulator, TraR/DksA family n=2 ... 138 6e-32 UniRef50_Q2LSS1 DnaK suppressor protein n=13 Tax=Deltaproteobact... 137 8e-32 UniRef50_A5EW31 RNA polymerase-binding protein DksA n=2 Tax=Gamm... 137 9e-32 UniRef50_A7HW84 Transcriptional regulator, TraR/DksA family n=68... 136 2e-31 UniRef50_A1AL35 Transcriptional regulator, TraR/DksA family n=8 ... 133 2e-30 UniRef50_Q1GI88 Transcriptional regulators TraR/DksA family n=26... 133 2e-30 UniRef50_A3RXC3 DnaK suppressor protein n=1 Tax=Ralstonia solana... 132 4e-30 UniRef50_Q0A892 Transcriptional regulators, TraR/DksA family n=1... 130 2e-29 UniRef50_B5EG80 Transcriptional regulator, TraR/DksA family n=4 ... 129 2e-29 UniRef50_B8H0C0 DnaK suppressor protein homolog n=110 Tax=Bacter... 129 3e-29 UniRef50_B8J371 Transcriptional regulator, TraR/DksA family n=2 ... 128 7e-29 UniRef50_Q3A0W2 DnaK suppressor protein n=2 Tax=Proteobacteria R... 126 2e-28 UniRef50_Q1MS84 Molecular chaperone dnaK n=4 Tax=Deltaproteobact... 125 5e-28 UniRef50_B6BSH6 DnaK suppressor protein n=6 Tax=Bacteria RepID=B... 120 1e-26 UniRef50_C7QCE7 Transcriptional regulator, TraR/DksA family n=1 ... 120 1e-26 UniRef50_A7H9X1 Transcriptional regulator, TraR/DksA family n=7 ... 118 7e-26 UniRef50_B5GH83 DNA-binding protein n=1 Tax=Streptomyces sp. SPB... 117 1e-25 UniRef50_Q0EXX5 Transcriptional regulators, TraR/DksA family pro... 116 2e-25 UniRef50_Q2SLB9 DnaK suppressor protein n=7 Tax=Gammaproteobacte... 114 9e-25 UniRef50_D2L9K5 Transcriptional regulator, TraR/DksA family n=2 ... 113 1e-24 UniRef50_B1J6V4 Transcriptional regulator, TraR/DksA family n=4 ... 113 2e-24 UniRef50_C0QFB9 DksA1 n=1 Tax=Desulfobacterium autotrophicum HRM... 113 2e-24 UniRef50_Q1JWV8 Transcriptional regulators, TraR/DksA family n=1... 113 2e-24 UniRef50_B4U7Z4 Transcriptional regulator, TraR/DksA family n=3 ... 112 4e-24 UniRef50_A8GD52 Transcriptional regulator, TraR/DksA family n=9 ... 111 5e-24 UniRef50_A5W685 Transcriptional regulator, TraR/DksA family n=11... 111 5e-24 UniRef50_UPI0001AEC064 DnaK suppressor protein n=1 Tax=Alteromon... 111 1e-23 UniRef50_Q2RK56 Transcriptional regulators, TraR/DksA family n=1... 110 1e-23 UniRef50_C8PIH5 DnaK suppressor protein n=1 Tax=Campylobacter gr... 110 1e-23 UniRef50_D2L3E3 Transcriptional regulator, TraR/DksA family n=2 ... 110 2e-23 UniRef50_Q9S2X6 Putative DNA-binding protein n=2 Tax=Streptomyce... 109 3e-23 UniRef50_Q67Q17 Putative uncharacterized protein n=1 Tax=Symbiob... 109 3e-23 UniRef50_D0LZD2 Transcriptional regulator, TraR/DksA family n=3 ... 108 5e-23 UniRef50_Q0VNX0 DnaK suppressor protein homolog, DksA/TraR famil... 108 7e-23 UniRef50_A4SHJ5 DnaK suppressor protein n=3 Tax=Gammaproteobacte... 107 9e-23 UniRef50_Q2GI38 DnaK suppressor protein n=9 Tax=Anaplasmataceae ... 106 2e-22 UniRef50_Q021M5 Transcriptional regulator, TraR/DksA family n=1 ... 106 2e-22 UniRef50_C8W4E4 Transcriptional regulator, TraR/DksA family n=1 ... 105 4e-22 UniRef50_A9G9K0 Putative dnaK suppressor protein n=1 Tax=Sorangi... 104 7e-22 UniRef50_C8X580 Transcriptional regulator, TraR/DksA family n=1 ... 104 9e-22 UniRef50_A1VXK8 DnaK suppressor protein, putative n=15 Tax=Campy... 104 1e-21 UniRef50_Q1IJ15 Transcriptional regulators, TraR/DksA family n=1... 104 1e-21 UniRef50_C6HWS3 Transcriptional regulator, TraR/DksA family n=3 ... 103 1e-21 UniRef50_A1HSA8 Transcriptional regulator, TraR/DksA family n=1 ... 103 1e-21 UniRef50_A1SL71 Zinc finger, DksA/TraR C4-type n=4 Tax=Actinomyc... 103 2e-21 UniRef50_B8FT18 Transcriptional regulator, TraR/DksA family n=2 ... 103 2e-21 UniRef50_B3EAN1 Transcriptional regulator, TraR/DksA family n=8 ... 103 3e-21 UniRef50_A0LTP3 Transcriptional regulators, TraR/DksA family n=7... 102 3e-21 UniRef50_B8J655 Transcriptional regulator, TraR/DksA family n=3 ... 102 3e-21 UniRef50_A4V7S0 Putative transcriptional regulator DnaK suppress... 101 5e-21 UniRef50_D0LUD2 Transcriptional regulator, TraR/DksA family n=1 ... 101 8e-21 UniRef50_D1X2L9 Transcriptional regulator, TraR/DksA family n=5 ... 101 1e-20 UniRef50_A8EWK7 DnaK suppressor protein DksA n=1 Tax=Arcobacter ... 101 1e-20 UniRef50_B2V8G8 Transcriptional regulator, TraR/DksA family n=4 ... 100 1e-20 UniRef50_B8CWL7 Transcriptional regulator, TraR/DksA family n=1 ... 100 1e-20 UniRef50_C5EYJ0 DnaK suppressor protein n=4 Tax=Helicobacter Rep... 100 2e-20 UniRef50_B1I4J4 Transcriptional regulator, TraR/DksA family n=1 ... 100 2e-20 UniRef50_B1H0G2 Putative dnaK suppressor n=1 Tax=uncultured Term... 100 2e-20 UniRef50_C1DXT7 Transcriptional regulator, TraR/DksA family n=5 ... 100 2e-20 UniRef50_Q01TC0 Transcriptional regulator, TraR/DksA family n=1 ... 99 3e-20 UniRef50_B0TGP7 Putative uncharacterized protein n=1 Tax=Helioba... 99 4e-20 UniRef50_C6PE95 Transcriptional regulator, TraR/DksA family n=1 ... 99 5e-20 UniRef50_Q30RD2 Transcriptional regulators, TraR/DksA family n=3... 98 6e-20 UniRef50_A4XDN2 Zinc finger, DksA/TraR C4-type n=5 Tax=Actinomyc... 98 6e-20 UniRef50_Q2YD37 Transcriptional regulators, TraR/DksA family n=2... 98 6e-20 UniRef50_B2A2J0 Transcriptional regulator, TraR/DksA family n=1 ... 98 7e-20 UniRef50_C0ZG84 Putative uncharacterized protein yteA n=1 Tax=Br... 98 9e-20 UniRef50_A5D3H2 Putative uncharacterized protein n=1 Tax=Pelotom... 97 1e-19 UniRef50_B8DQJ2 Transcriptional regulator, TraR/DksA family n=1 ... 97 1e-19 UniRef50_C0GJQ4 Transcriptional regulator, TraR/DksA family n=1 ... 97 1e-19 UniRef50_Q97H97 General stress protein, DnaK suppressor DskA, YT... 97 1e-19 UniRef50_B5YK78 RNA polymerase-binding protein DksA n=1 Tax=Ther... 97 1e-19 UniRef50_A3DD29 Transcriptional regulators, TraR/DksA family n=5... 97 1e-19 UniRef50_A6WCW5 Transcriptional regulator, TraR/DksA family n=10... 97 2e-19 UniRef50_C1I8K1 Putative uncharacterized protein n=1 Tax=Clostri... 97 2e-19 UniRef50_B3DUR8 DnaK suppressor protein n=1 Tax=Methylacidiphilu... 96 4e-19 UniRef50_Q01U65 Transcriptional regulator, TraR/DksA family n=1 ... 96 4e-19 UniRef50_Q253H0 DnaK suppressor n=16 Tax=Chlamydiales RepID=Q253... 96 4e-19 UniRef50_A0RMM0 Transcriptional regulators, TraR/DksA family n=9... 96 4e-19 UniRef50_A6DCX4 Transcriptional regulator, TraR/DksA family prot... 95 4e-19 UniRef50_C6C0K2 Transcriptional regulator, TraR/DksA family n=1 ... 95 4e-19 UniRef50_A2SLK5 Putative DNA-binding protein n=1 Tax=Methylibium... 94 1e-18 UniRef50_C6Q1P6 Transcriptional regulator, TraR/DksA family n=13... 94 1e-18 UniRef50_A3ZQT2 Probable DnaK suppressor protein n=1 Tax=Blastop... 94 1e-18 UniRef50_A0RK79 DnaK suppressor protein n=74 Tax=Bacillus RepID=... 94 1e-18 UniRef50_B2KE71 Transcriptional regulator, TraR/DksA family n=1 ... 94 2e-18 UniRef50_Q894D3 DnaK suppressor protein n=1 Tax=Clostridium teta... 93 2e-18 UniRef50_D2LWG8 Transcriptional regulator, TraR/DksA family n=1 ... 93 2e-18 UniRef50_Q30V43 Transcriptional regulators, TraR/DksA family n=1... 93 3e-18 UniRef50_Q72G22 C4-type zinc finger protein, DksA/TraR family n=... 93 3e-18 UniRef50_A8MH72 Transcriptional regulator, TraR/DksA family n=1 ... 93 3e-18 UniRef50_C8WW56 Transcriptional regulator, TraR/DksA family n=2 ... 92 4e-18 UniRef50_A6TRY0 Transcriptional regulator, TraR/DksA family n=1 ... 92 4e-18 UniRef50_C1F3S7 Putative RNA polymerase-binding protein DksA n=1... 92 4e-18 UniRef50_Q7VGT4 DnaK suppressor protein DskA n=2 Tax=Helicobacte... 92 5e-18 UniRef50_D1C120 Transcriptional regulator, TraR/DksA family n=1 ... 92 5e-18 UniRef50_C9R7U4 Transcriptional regulator, TraR/DksA family n=1 ... 92 7e-18 UniRef50_A0LGY5 Transcriptional regulator, TraR/DksA family n=1 ... 91 1e-17 UniRef50_Q48NH0 RNA polymerase-binding protein DksA n=2 Tax=Pseu... 91 1e-17 UniRef50_C7LTL7 Transcriptional regulator, TraR/DksA family n=1 ... 91 1e-17 UniRef50_D1CBT8 Transcriptional regulator, TraR/DksA family n=1 ... 91 1e-17 UniRef50_Q021L0 Transcriptional regulator, TraR/DksA family n=1 ... 90 1e-17 UniRef50_A1K6D2 Conserved hypothetical DnaK suppressor protein n... 90 2e-17 UniRef50_P42408 Uncharacterized protein yteA n=2 Tax=Bacillus su... 90 2e-17 UniRef50_A0LMB8 Transcriptional regulator, TraR/DksA family n=1 ... 90 3e-17 UniRef50_A5UPY9 Transcriptional regulator, TraR/DksA family n=2 ... 90 3e-17 UniRef50_C9RQK2 Transcriptional regulator, TraR/DksA family n=1 ... 89 4e-17 UniRef50_A4BMT6 Putative uncharacterized protein n=1 Tax=Nitroco... 89 4e-17 UniRef50_Q2B4E3 Putative uncharacterized protein n=4 Tax=Bacillu... 89 4e-17 UniRef50_A4XKS6 Transcriptional regulator, TraR/DksA family n=2 ... 89 5e-17 UniRef50_Q2GEN7 DnaK suppressor protein n=2 Tax=Neorickettsia Re... 89 5e-17 UniRef50_A9B2U1 Transcriptional regulator, TraR/DksA family n=1 ... 89 5e-17 UniRef50_D1UB56 Transcriptional regulator, TraR/DksA family n=1 ... 88 8e-17 UniRef50_Q221D7 Transcriptional regulators, TraR/DksA family n=3... 88 9e-17 UniRef50_Q1Q506 Similar to DnaK suppressor protein n=1 Tax=Candi... 88 1e-16 UniRef50_B5YGE3 DnaK suppressor protein n=1 Tax=Thermodesulfovib... 87 1e-16 UniRef50_Q12HC6 Transcriptional regulators, TraR/DksA family n=1... 87 2e-16 UniRef50_Q2BI57 Zn-finger, prokaryotic DksA/TraR C4 type n=1 Tax... 87 2e-16 UniRef50_D0LJW3 Transcriptional regulator, TraR/DksA family n=1 ... 87 2e-16 UniRef50_B2V854 Transcriptional regulator, TraR/DksA family n=4 ... 87 2e-16 UniRef50_Q7UEL7 Probable dnaK (DksA-like) supressor protein n=1 ... 87 2e-16 UniRef50_C3XG00 DnaK suppressor protein n=1 Tax=Helicobacter bil... 85 6e-16 UniRef50_A4X6U9 Zinc finger, DksA/TraR C4-type n=4 Tax=Micromono... 84 2e-15 UniRef50_D1N407 Transcriptional regulator, TraR/DksA family n=1 ... 83 2e-15 UniRef50_B8DLC7 Transcriptional regulator, TraR/DksA family n=1 ... 83 2e-15 UniRef50_Q1D0G7 C4-type zinc finger domain protein, DksA/TraR fa... 83 3e-15 UniRef50_C0R4V6 DnaK suppressor protein, putative n=6 Tax=Wolbac... 83 3e-15 UniRef50_D1BG79 DnaK suppressor protein n=1 Tax=Sanguibacter ked... 82 8e-15 UniRef50_Q2BN62 DnaK suppressor protein, putative n=1 Tax=Neptun... 82 8e-15 UniRef50_C6I0P9 Transcriptional regulator, TraR/DksA family n=3 ... 81 1e-14 UniRef50_C7R8Q8 Transcriptional regulator, TraR/DksA family n=1 ... 80 2e-14 UniRef50_C5CLF2 Transcriptional regulator, TraR/DksA family n=1 ... 80 3e-14 UniRef50_B8GPY8 Transcriptional regulator, TraR/DksA family n=1 ... 80 3e-14 UniRef50_B7S3A6 Putative uncharacterized protein n=1 Tax=marine ... 79 3e-14 UniRef50_Q2IQL4 Transcriptional regulator, TraR/DksA family n=3 ... 79 3e-14 UniRef50_Q6MGP9 DksA protein n=1 Tax=Bdellovibrio bacteriovorus ... 79 5e-14 UniRef50_A3JJC9 Putative uncharacterized protein n=1 Tax=Marinob... 78 8e-14 UniRef50_C3KFN9 Putative uncharacterized protein n=8 Tax=Bacteri... 77 2e-13 UniRef50_Q8ENZ4 Putative uncharacterized protein OB2328 n=1 Tax=... 76 4e-13 UniRef50_Q7MQQ3 Putative uncharacterized protein n=1 Tax=Wolinel... 75 5e-13 UniRef50_D2MJ83 Transcriptional regulator, TraR/DksA family n=1 ... 75 5e-13 UniRef50_Q2GBE3 Transcriptional regulator, TraR/DksA family n=3 ... 73 3e-12 Sequences not found previously or not previously below threshold: UniRef50_A4J571 Transcriptional regulator, TraR/DksA family n=1 ... 101 7e-21 UniRef50_B0K2T3 Transcriptional regulator, TraR/DksA family n=10... 100 2e-20 UniRef50_UPI0001788757 transcriptional regulator, TraR/DksA fami... 98 8e-20 UniRef50_B4D0A5 Transcriptional regulator, TraR/DksA family n=2 ... 98 9e-20 UniRef50_B9L783 Transcriptional regulator, TraR/DksA family n=1 ... 97 2e-19 UniRef50_C9S0U4 Transcriptional regulator, TraR/DksA family n=14... 95 6e-19 UniRef50_C6D536 Transcriptional regulator, TraR/DksA family n=2 ... 95 6e-19 UniRef50_C6J3C7 DnaK suppressor protein n=2 Tax=Bacillales RepID... 95 9e-19 UniRef50_D2R5D7 Transcriptional regulator, TraR/DksA family n=1 ... 93 2e-18 UniRef50_A6Q9W6 DnaK suppressor protein DksA n=1 Tax=Sulfurovum ... 93 3e-18 UniRef50_Q3ABZ5 Putative transcriptional regulator n=1 Tax=Carbo... 93 3e-18 UniRef50_Q73KX9 C4 zinc finger domain protein, DksA/TraR family ... 92 5e-18 UniRef50_B9XR79 Transcriptional regulator, TraR/DksA family n=1 ... 92 8e-18 UniRef50_B2S244 Possible dnaK suppressor n=3 Tax=Treponema RepID... 91 1e-17 UniRef50_O66611 Uncharacterized protein aq_250 n=3 Tax=Aquificac... 90 3e-17 UniRef50_B0SIE7 DnaK suppressor protein n=6 Tax=Leptospira RepID... 89 4e-17 UniRef50_D1C5L2 Transcriptional regulator, TraR/DksA family n=1 ... 89 4e-17 UniRef50_D1YA14 C4-type zinc finger protein, DksA/TraR family n=... 88 6e-17 UniRef50_Q7UR73 Probable DnaK suppressor protein n=1 Tax=Rhodopi... 88 6e-17 UniRef50_C1ZKC1 DnaK suppressor protein n=1 Tax=Planctomyces lim... 88 7e-17 UniRef50_C5RLG0 Transcriptional regulator, TraR/DksA family n=1 ... 88 1e-16 UniRef50_D1C0D4 Transcriptional regulator, TraR/DksA family n=2 ... 88 1e-16 UniRef50_B2ULP7 Transcriptional regulator, TraR/DksA family n=1 ... 87 1e-16 UniRef50_A6FXL2 DnaK suppressor protein, putative n=1 Tax=Plesio... 87 2e-16 UniRef50_B4UII3 Transcriptional regulator, TraR/DksA family n=4 ... 87 2e-16 UniRef50_D2R7B0 Transcriptional regulator, TraR/DksA family n=2 ... 87 2e-16 UniRef50_Q029W8 Transcriptional regulator, TraR/DksA family n=1 ... 87 2e-16 UniRef50_Q8ESP2 Hypothetical conserved protein n=1 Tax=Oceanobac... 87 2e-16 UniRef50_Q39WX5 Transcriptional regulators, TraR/DksA family n=4... 87 3e-16 UniRef50_A6DK24 DnaK suppressor, putative n=1 Tax=Lentisphaera a... 85 5e-16 UniRef50_B3QWB1 Transcriptional regulator, TraR/DksA family n=1 ... 85 6e-16 UniRef50_B3ES66 Putative uncharacterized protein n=1 Tax=Candida... 85 7e-16 UniRef50_A1QYW3 DnaK suppressor protein n=21 Tax=Borrelia RepID=... 85 7e-16 UniRef50_A9AKZ2 Transcriptional regulator, TraR/DksA family n=5 ... 85 8e-16 UniRef50_Q5WGI4 General stress protein GSP160 n=1 Tax=Bacillus c... 85 9e-16 UniRef50_B1ZV03 Transcriptional regulator, TraR/DksA family n=2 ... 83 2e-15 UniRef50_UPI0001C4239D hypothetical protein BpOF4_09730 n=1 Tax=... 83 2e-15 UniRef50_B3ELW2 Transcriptional regulator, TraR/DksA family n=11... 83 3e-15 UniRef50_A0Q071 General stress protein, DnaK suppressor DskA n=3... 83 3e-15 UniRef50_Q3A5P4 DnaK suppressor protein n=1 Tax=Pelobacter carbi... 83 3e-15 UniRef50_Q0AHN9 Transcriptional regulators, TraR/DksA family pro... 82 4e-15 UniRef50_B8H9G6 Transcriptional regulator, TraR/DksA family n=3 ... 82 5e-15 UniRef50_A3IED4 DnaK suppressor protein n=2 Tax=Bacillaceae RepI... 82 5e-15 UniRef50_Q182T9 Putative general stress protein n=7 Tax=Clostrid... 82 5e-15 UniRef50_D2R2J7 Transcriptional regulator, TraR/DksA family n=1 ... 82 6e-15 UniRef50_C1A882 Putative uncharacterized protein n=1 Tax=Gemmati... 82 7e-15 UniRef50_C9NIY3 Transcriptional regulator, TraR/DksA family n=3 ... 82 7e-15 UniRef50_Q02C95 Transcriptional regulator, TraR/DksA family n=1 ... 81 9e-15 UniRef50_B5JMU6 Putative uncharacterized protein n=1 Tax=Verruco... 81 9e-15 UniRef50_Q5WFI4 Putative uncharacterized protein n=1 Tax=Bacillu... 81 1e-14 UniRef50_C0GTL3 Transcriptional regulator, TraR/DksA family n=1 ... 80 2e-14 UniRef50_Q9K9V1 BH2544 protein n=2 Tax=Bacillus RepID=Q9K9V1_BACHD 80 2e-14 UniRef50_D0MD16 Transcriptional regulator, TraR/DksA family n=2 ... 80 2e-14 UniRef50_B4D2T0 Transcriptional regulator, TraR/DksA family n=1 ... 80 3e-14 UniRef50_A0LSA0 Transcriptional regulators, TraR/DksA family n=1... 80 3e-14 UniRef50_C4KZG3 Transcriptional regulator, TraR/DksA family n=2 ... 80 3e-14 UniRef50_C0QW50 DNA-binding transcriptional regulator of transcr... 79 4e-14 UniRef50_B0VG86 Putative uncharacterized protein n=1 Tax=Candida... 79 4e-14 UniRef50_A1B0I3 Transcriptional regulator, TraR/DksA family n=9 ... 79 4e-14 UniRef50_A6C001 Probable DnaK suppressor protein n=1 Tax=Plancto... 78 6e-14 UniRef50_Q2SPR7 DnaK suppressor protein n=1 Tax=Hahella chejuens... 78 7e-14 UniRef50_B1KG10 Transcriptional regulator, TraR/DksA family n=1 ... 78 8e-14 UniRef50_Q2NBT1 Putative uncharacterized protein n=1 Tax=Erythro... 78 9e-14 UniRef50_B9XD69 Transcriptional regulator, TraR/DksA family n=1 ... 78 1e-13 UniRef50_A1ATM0 Transcriptional regulator, TraR/DksA family n=1 ... 78 1e-13 UniRef50_A0AZX7 Transcriptional regulators, TraR/DksA family n=3... 78 1e-13 UniRef50_D1ACI4 Transcriptional regulator, TraR/DksA family n=2 ... 77 1e-13 UniRef50_P80872 General stress protein 16O n=2 Tax=Bacillus subt... 77 2e-13 UniRef50_UPI00016C3CE0 transcriptional regulators, TraR/DksA fam... 77 2e-13 UniRef50_Q473A0 Zn-finger, prokaryotic DksA/TraR C4 type n=3 Tax... 77 3e-13 UniRef50_A6U730 Transcriptional regulator, TraR/DksA family n=4 ... 77 3e-13 UniRef50_C6E710 Transcriptional regulator, TraR/DksA family n=3 ... 76 4e-13 UniRef50_C1SL78 DnaK suppressor protein n=1 Tax=Denitrovibrio ac... 76 4e-13 UniRef50_B6R7R7 Transcriptional regulator, TraR/DksA family n=1 ... 75 5e-13 UniRef50_A5WFD1 Transcriptional regulator, TraR/DksA family n=3 ... 75 6e-13 UniRef50_UPI00019074B1 putative DnaK suppressor protein n=1 Tax=... 75 7e-13 UniRef50_Q12E87 Transcriptional regulators, TraR/DksA family n=1... 75 8e-13 UniRef50_D0D572 Transcriptional regulator, TraR/DksA family n=1 ... 75 8e-13 UniRef50_UPI00016C4B65 DnaK suppressor protein DksA n=1 Tax=Gemm... 74 1e-12 UniRef50_Q3JAV6 Putative uncharacterized protein n=2 Tax=Nitroso... 74 1e-12 UniRef50_B2UIX3 Transcriptional regulator, TraR/DksA family n=6 ... 74 2e-12 UniRef50_Q1MI46 Putative dnaK suppressor protein n=2 Tax=Rhizobi... 73 2e-12 UniRef50_A8FE57 General stress protein n=2 Tax=Bacillus pumilus ... 73 2e-12 UniRef50_A1DZZ7 DnaK suppressor protein n=1 Tax=Halobacillus hal... 73 2e-12 UniRef50_D1AEE3 Transcriptional regulator, TraR/DksA family n=1 ... 73 2e-12 UniRef50_C5C3L5 Transcriptional regulator, TraR/DksA family n=1 ... 73 2e-12 UniRef50_A8V318 Putative uncharacterized protein n=1 Tax=Hydroge... 73 3e-12 UniRef50_Q2K1F6 Putative DnaK suppressor protein n=1 Tax=Rhizobi... 73 3e-12 UniRef50_Q6MHM2 DnaK deletion suppressor protein n=2 Tax=Bdellov... 73 3e-12 UniRef50_A4F8B9 Possible suppressor protein DnaK n=6 Tax=Actinom... 73 4e-12 UniRef50_A6QA93 Putative uncharacterized protein n=1 Tax=Sulfuro... 73 4e-12 UniRef50_A6FZV7 Transcriptional regulator, TraR/DksA family prot... 72 4e-12 UniRef50_A1WBE4 Transcriptional regulator, TraR/DksA family n=3 ... 72 4e-12 UniRef50_D1SGF0 Transcriptional regulator, TraR/DksA family n=1 ... 72 6e-12 UniRef50_D2B0C3 Transcriptional regulator, TraR/DksA family n=1 ... 72 6e-12 >UniRef50_P0ABS3 DnaK suppressor protein n=247 Tax=Proteobacteria RepID=DKSA_ECO57 Length = 151 Score = 199 bits (506), Expect = 2e-50, Method: Composition-based stats. Identities = 151/151 (100%), Positives = 151/151 (100%) Query: 1 MQEGQNRKTSSLSILAIAGVEPYQEKPGEEYMNEAQLAHFRRILEAWRNQLRDEVDRTVT 60 MQEGQNRKTSSLSILAIAGVEPYQEKPGEEYMNEAQLAHFRRILEAWRNQLRDEVDRTVT Sbjct: 1 MQEGQNRKTSSLSILAIAGVEPYQEKPGEEYMNEAQLAHFRRILEAWRNQLRDEVDRTVT 60 Query: 61 HMQDEAANFPDPVDRAAQEEEFSLELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVE 120 HMQDEAANFPDPVDRAAQEEEFSLELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVE Sbjct: 61 HMQDEAANFPDPVDRAAQEEEFSLELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVE 120 Query: 121 IGIRRLEARPTADLCIDCKTLAEIREKQMAG 151 IGIRRLEARPTADLCIDCKTLAEIREKQMAG Sbjct: 121 IGIRRLEARPTADLCIDCKTLAEIREKQMAG 151 >UniRef50_Q89AR3 DnaK suppressor protein homolog n=7 Tax=Gammaproteobacteria RepID=DKSA_BUCBP Length = 151 Score = 189 bits (481), Expect = 2e-47, Method: Composition-based stats. Identities = 105/151 (69%), Positives = 134/151 (88%) Query: 1 MQEGQNRKTSSLSILAIAGVEPYQEKPGEEYMNEAQLAHFRRILEAWRNQLRDEVDRTVT 60 MQ+ +N+K SSLSIL +AGV+PY+ K E+YMN Q+ HF++IL AW+NQLR+++ +T Sbjct: 1 MQKEKNKKQSSLSILFMAGVQPYKNKKNEKYMNTKQIDHFKKILIAWKNQLRNDISQTRL 60 Query: 61 HMQDEAANFPDPVDRAAQEEEFSLELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVE 120 ++QD+A N+PDP+DRA QEEEFS ELR+RDRERKLI+KIEKTLKKVE++DFGYCESCG+E Sbjct: 61 NIQDKATNYPDPIDRAVQEEEFSFELRHRDRERKLIEKIEKTLKKVENKDFGYCESCGIE 120 Query: 121 IGIRRLEARPTADLCIDCKTLAEIREKQMAG 151 IGI+RLEARPTA+LCIDCKTL+EIREKQ+ G Sbjct: 121 IGIKRLEARPTANLCIDCKTLSEIREKQILG 151 >UniRef50_A7K6F3 DnaK suppressor protein (Fragment) n=48 Tax=Vibrionales RepID=A7K6F3_VIBSE Length = 208 Score = 187 bits (476), Expect = 8e-47, Method: Composition-based stats. Identities = 116/142 (81%), Positives = 131/142 (92%) Query: 8 KTSSLSILAIAGVEPYQEKPGEEYMNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAA 67 K ++ ILAIAGVEPYQEKPGEEYM+ Q+ HF +IL AWR+QLR EVDRTV HMQDEAA Sbjct: 5 KKKTIGILAIAGVEPYQEKPGEEYMSPEQVEHFTKILTAWRDQLRAEVDRTVHHMQDEAA 64 Query: 68 NFPDPVDRAAQEEEFSLELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLE 127 NFPDPVDRA+QEEEFSLELRNRDRER+LIKKIEKTL K++++DFG+CESCGVEIG+RRLE Sbjct: 65 NFPDPVDRASQEEEFSLELRNRDRERRLIKKIEKTLDKIKEDDFGFCESCGVEIGVRRLE 124 Query: 128 ARPTADLCIDCKTLAEIREKQM 149 ARPTADLCIDCKTLAEI+EKQM Sbjct: 125 ARPTADLCIDCKTLAEIKEKQM 146 >UniRef50_P43758 DnaK suppressor protein homolog n=104 Tax=Proteobacteria RepID=DKSA_HAEIN Length = 145 Score = 177 bits (450), Expect = 8e-44, Method: Composition-based stats. Identities = 107/143 (74%), Positives = 121/143 (84%) Query: 9 TSSLSILAIAGVEPYQEKPGEEYMNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAAN 68 +SLS+L +AGV+PYQ K EEYMNE Q+ HFR+IL AW Q+ +E RTV HMQDE N Sbjct: 3 RASLSLLDLAGVKPYQMKKDEEYMNEEQILHFRKILNAWHEQIVEEASRTVAHMQDEVTN 62 Query: 69 FPDPVDRAAQEEEFSLELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEA 128 FPDP DRA QEEEFSLELRNRDRERKL+KKIE TLKK++ +DFGYC+ CG EIGIRRLEA Sbjct: 63 FPDPADRATQEEEFSLELRNRDRERKLMKKIEATLKKLDTDDFGYCDCCGEEIGIRRLEA 122 Query: 129 RPTADLCIDCKTLAEIREKQMAG 151 RPTADLCIDCKTLAEIREKQ+AG Sbjct: 123 RPTADLCIDCKTLAEIREKQVAG 145 >UniRef50_A7C5U4 Zn-finger, prokaryotic DksA/TraR C4 type n=1 Tax=Beggiatoa sp. PS RepID=A7C5U4_9GAMM Length = 155 Score = 163 bits (412), Expect = 2e-39, Method: Composition-based stats. Identities = 64/136 (47%), Positives = 87/136 (63%) Query: 12 LSILAIAGVEPYQEKPGEEYMNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAANFPD 71 +S + I + PY GEEYM+ QL HF+R+L W+ L D+V RTV MQD +NF D Sbjct: 1 MSEVQIPTITPYHSSEGEEYMSNKQLEHFQRVLLQWKQNLMDDVTRTVHQMQDNLSNFAD 60 Query: 72 PVDRAAQEEEFSLELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPT 131 P DRA QEEEF++ELR RDRERKLIKKI+ +LK ++ +++G+ + + + Sbjct: 61 PNDRATQEEEFTIELRTRDRERKLIKKIDASLKTIDTKEYGFVSVVALRLVFIAWKLDLM 120 Query: 132 ADLCIDCKTLAEIREK 147 CIDCKT E+REK Sbjct: 121 LAKCIDCKTRDEVREK 136 >UniRef50_Q21SV6 Transcriptional regulators, TraR/DksA family n=58 Tax=Betaproteobacteria RepID=Q21SV6_RHOFD Length = 429 Score = 160 bits (405), Expect = 1e-38, Method: Composition-based stats. Identities = 57/124 (45%), Positives = 83/124 (66%) Query: 27 PGEEYMNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAANFPDPVDRAAQEEEFSLEL 86 P +EYMN+ QLA FRR+L A + + +T H++ + PDP DRA EEE +LEL Sbjct: 305 PDDEYMNDTQLAFFRRVLTALKQDILSNAGQTTEHLRADTVVVPDPADRATIEEEHALEL 364 Query: 87 RNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAEIRE 146 R RDRERKL+KKIE++L +++ D+GYC+ G IG+ RL ARPTA+L ++ + E+++ Sbjct: 365 RTRDRERKLLKKIEQSLARIDSGDYGYCDETGEAIGVGRLLARPTANLSLEAQQRRELKQ 424 Query: 147 KQMA 150 K Sbjct: 425 KMFG 428 >UniRef50_A8PLZ9 Suppressor protein DksA n=3 Tax=Gammaproteobacteria RepID=A8PLZ9_9COXI Length = 295 Score = 158 bits (400), Expect = 5e-38, Method: Composition-based stats. Identities = 83/133 (62%), Positives = 104/133 (78%) Query: 19 GVEPYQEKPGEEYMNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAANFPDPVDRAAQ 78 + PY+E+PGE+YM+ +Q A+FRR+L + L +++ RTV H+QDE PD DRA Q Sbjct: 163 NIAPYKERPGEDYMSSSQQAYFRRLLLQRKRVLLEDMGRTVHHLQDEGTPLPDMSDRATQ 222 Query: 79 EEEFSLELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDC 138 EEEF+LELR RDRERKLIKKIE L ++++ +G+C SCGVEIGIRRLEARPTA+LCIDC Sbjct: 223 EEEFNLELRARDRERKLIKKIEDALHQLDEGHYGFCSSCGVEIGIRRLEARPTANLCIDC 282 Query: 139 KTLAEIREKQMAG 151 KTL EIREKQ G Sbjct: 283 KTLDEIREKQTGG 295 >UniRef50_Q5UF45 Predicted DskA family protein n=4 Tax=Bacteria RepID=Q5UF45_9PROT Length = 202 Score = 152 bits (383), Expect = 5e-36, Method: Composition-based stats. Identities = 78/143 (54%), Positives = 103/143 (72%) Query: 9 TSSLSILAIAGVEPYQEKPGEEYMNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAAN 68 + + + +PY+ K E+YMN+ Q HF +L AW+ L +E ++T +Q + +N Sbjct: 60 SPTDFSAFLKNFQPYRSKKSEKYMNKNQQKHFLGMLTAWKEALIEEQEKTEQLIQQDQSN 119 Query: 69 FPDPVDRAAQEEEFSLELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEA 128 FPD +DRAA+EEEF LELR R+RERKLI KI+ +LK +ED +GYCESCGVEIGI+RLEA Sbjct: 120 FPDSLDRAAKEEEFMLELRKRERERKLIAKIDLSLKDLEDNLYGYCESCGVEIGIKRLEA 179 Query: 129 RPTADLCIDCKTLAEIREKQMAG 151 RPTA CIDCKT+ EI+EKQ G Sbjct: 180 RPTATKCIDCKTVDEIKEKQQFG 202 >UniRef50_Q12EM6 Transcriptional regulators, TraR/DksA family n=65 Tax=Betaproteobacteria RepID=Q12EM6_POLSJ Length = 450 Score = 148 bits (374), Expect = 5e-35, Method: Composition-based stats. Identities = 54/124 (43%), Positives = 81/124 (65%) Query: 27 PGEEYMNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAANFPDPVDRAAQEEEFSLEL 86 P EYMNE Q+A FR L + ++ + T H++++ PDP DRA EEE +LEL Sbjct: 326 PDSEYMNEKQMAFFRHKLSVLKQEIHNSAGETTEHLREDTVVVPDPADRATIEEEHALEL 385 Query: 87 RNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAEIRE 146 R RDRERKL+KKIE+++ +++ D+GYC+ G IG+ RL ARPTA+L ++ + E+++ Sbjct: 386 RTRDRERKLLKKIEQSIARIDSGDYGYCDETGEPIGVGRLIARPTANLSLEAQQRRELKQ 445 Query: 147 KQMA 150 K Sbjct: 446 KMFG 449 >UniRef50_Q31G85 Transcriptional regulators, TraR/DksA family n=1 Tax=Thiomicrospira crunogena XCL-2 RepID=Q31G85_THICR Length = 142 Score = 148 bits (373), Expect = 7e-35, Method: Composition-based stats. Identities = 72/134 (53%), Positives = 94/134 (70%) Query: 16 AIAGVEPYQEKPGEEYMNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAANFPDPVDR 75 I Y+ KPGEEYM+ L HF+ L AW+ QL E TV H++ +++ DP DR Sbjct: 7 FIEDYPQYEMKPGEEYMSPEMLEHFKNKLLAWKKQLIWEATNTVQHLRTDSSTPADPSDR 66 Query: 76 AAQEEEFSLELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLC 135 A+QEEEF+LELR RDRERKLI KI+K+L+ +ED D+GYC+ G EIG+ R+EARPTA L Sbjct: 67 ASQEEEFALELRTRDRERKLISKIDKSLRDIEDGDYGYCKMSGEEIGLARMEARPTATLT 126 Query: 136 IDCKTLAEIREKQM 149 ++ KT E+REKQ Sbjct: 127 VEMKTKQEMREKQG 140 >UniRef50_B4SQA3 Transcriptional regulator, TraR/DksA family n=35 Tax=Proteobacteria RepID=B4SQA3_STRM5 Length = 405 Score = 147 bits (370), Expect = 1e-34, Method: Composition-based stats. Identities = 58/131 (44%), Positives = 81/131 (61%) Query: 20 VEPYQEKPGEEYMNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAANFPDPVDRAAQE 79 Y+ EEYM+ Q +FR+ L+ WR L +E +T+ ++++E + D +RA +E Sbjct: 274 PAGYKPSSEEEYMSPLQQEYFRQRLQNWRADLVEESKQTIENLREEVRDIGDEAERATRE 333 Query: 80 EEFSLELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCK 139 E SLELR RDR RKLI KI+ TLK++E D+GYC G EIG+ RLEAR TA+ ID + Sbjct: 334 TENSLELRTRDRYRKLIGKIDSTLKRLEAGDYGYCVDTGEEIGLERLEARLTAERTIDAQ 393 Query: 140 TLAEIREKQMA 150 E +KQ Sbjct: 394 ERWEHLQKQQG 404 >UniRef50_Q6SHS2 DnaK suppressor protein n=1 Tax=uncultured marine bacterium 311 RepID=Q6SHS2_9BACT Length = 190 Score = 141 bits (355), Expect = 7e-33, Method: Composition-based stats. Identities = 73/152 (48%), Positives = 100/152 (65%), Gaps = 4/152 (2%) Query: 4 GQNRKTSSL--SILAIAGVEPYQEKPGEEYMNEAQLAHFRRILEAWRNQLRDEVDRTVTH 61 + + S +A VEPY+ E+YM+ Q HF +ILE W+ L+ E RT Sbjct: 39 EKKIRQPSYLGEEAFLATVEPYKLNKKEKYMSAKQKKHFLKILERWKQLLQLEQSRTADK 98 Query: 62 MQDEAANFPDPVDRAAQEEEFSLELRNRDRERKLIKKIEKTLKKVEDEDFGYCE--SCGV 119 +Q+ + +F D DRA EE F+LE++ R+RERKL+ KI++++K + + D+G+C +CGV Sbjct: 99 IQNNSNHFADDSDRATHEEGFTLEIKTRERERKLLTKIDQSVKGLSNHDYGFCLNPNCGV 158 Query: 120 EIGIRRLEARPTADLCIDCKTLAEIREKQMAG 151 EIGIRRLEARPTA LCIDCKTL EI EKQ G Sbjct: 159 EIGIRRLEARPTARLCIDCKTLEEITEKQQYG 190 >UniRef50_A6T2Z9 DnaK suppressor protein n=5 Tax=Betaproteobacteria RepID=A6T2Z9_JANMA Length = 310 Score = 140 bits (354), Expect = 9e-33, Method: Composition-based stats. Identities = 59/147 (40%), Positives = 89/147 (60%), Gaps = 2/147 (1%) Query: 5 QNRKTSSLSILAIAGVEPYQEKPGE-EYMNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQ 63 ++ K++S++ E K GE +YMN+AQLA F+ L+ L D T H++ Sbjct: 164 KSSKSTSVASDTTLLTEAQILKMGEKDYMNDAQLAFFKNRLQQLEKDLLKNADETTEHLR 223 Query: 64 DEAANFPDPVDRAAQEEEFSLELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGI 123 E PDP DRA EEE +LELR RDRERKL+KK++++L ++ ++G+CE G IG+ Sbjct: 224 -ETVLVPDPADRATIEEEHALELRTRDRERKLLKKVQQSLLSIDSGEYGWCEETGEPIGV 282 Query: 124 RRLEARPTADLCIDCKTLAEIREKQMA 150 RL ARPTA L ++ + E+++K Sbjct: 283 PRLLARPTATLSLEAQQRRELKQKLYG 309 >UniRef50_A0LCU1 Transcriptional regulator, TraR/DksA family n=2 Tax=Proteobacteria RepID=A0LCU1_MAGSM Length = 155 Score = 138 bits (347), Expect = 6e-32, Method: Composition-based stats. Identities = 68/138 (49%), Positives = 90/138 (65%) Query: 10 SSLSILAIAGVEPYQEKPGEEYMNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAANF 69 + I I E Y EEYM E Q A FR L W+ QL +E ++TV M +E A F Sbjct: 7 AEKKIADIILPEGYTPSEDEEYMCEMQRAFFRHQLLIWKQQLVEEAEKTVLGMHEEKAVF 66 Query: 70 PDPVDRAAQEEEFSLELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEAR 129 DP DRA+ E + + ELR RDRERKLI KI++T++ +E++++G+C CGVEIG+ RL+AR Sbjct: 67 ADPTDRASLETDRNFELRTRDRERKLIGKIDRTIRTIEEDEYGFCSGCGVEIGLGRLQAR 126 Query: 130 PTADLCIDCKTLAEIREK 147 P DLCIDCKT E E+ Sbjct: 127 PVTDLCIDCKTKEEQMER 144 >UniRef50_Q2LSS1 DnaK suppressor protein n=13 Tax=Deltaproteobacteria RepID=Q2LSS1_SYNAS Length = 150 Score = 137 bits (346), Expect = 8e-32, Method: Composition-based stats. Identities = 54/119 (45%), Positives = 76/119 (63%) Query: 29 EEYMNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAANFPDPVDRAAQEEEFSLELRN 88 E ++ +L FR +L N+L ++ +TV M D N+PDP DRA+ E + + ELR Sbjct: 28 EMALSHDKLEFFRMLLTQKINELLEDAGKTVADMTDSKENYPDPTDRASLESDRNFELRM 87 Query: 89 RDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAEIREK 147 RDRERKLI K+++ +K++++ +FG CE CG I +RL ARP LCIDCKT E EK Sbjct: 88 RDRERKLIAKMQEAIKRIDEGEFGLCEVCGGPISEKRLMARPVTTLCIDCKTKQEKLEK 146 >UniRef50_A5EW31 RNA polymerase-binding protein DksA n=2 Tax=Gammaproteobacteria RepID=A5EW31_DICNV Length = 143 Score = 137 bits (346), Expect = 9e-32, Method: Composition-based stats. Identities = 68/129 (52%), Positives = 89/129 (68%) Query: 22 PYQEKPGEEYMNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAANFPDPVDRAAQEEE 81 Y E YM+E QL +F RIL+ W+ + + ++T +++DE D DRA+QEEE Sbjct: 10 KYTPAADEPYMSEQQLDYFSRILQEWKATILADSEKTREYLKDERPQTADLNDRASQEEE 69 Query: 82 FSLELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTL 141 FSLELR RDRERKL++KI+K L++++ FGYCE C EIG RLEARPTA+LCIDCK L Sbjct: 70 FSLELRTRDRERKLLRKIDKALERIKQGHFGYCEQCDEEIGFHRLEARPTAELCIDCKHL 129 Query: 142 AEIREKQMA 150 AE +EK Sbjct: 130 AERKEKSFY 138 >UniRef50_A7HW84 Transcriptional regulator, TraR/DksA family n=68 Tax=Alphaproteobacteria RepID=A7HW84_PARL1 Length = 146 Score = 136 bits (343), Expect = 2e-31, Method: Composition-based stats. Identities = 55/142 (38%), Positives = 85/142 (59%), Gaps = 3/142 (2%) Query: 6 NRKTSSLSILAIAGVEPYQEKPGEEYMNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDE 65 ++ +++ G Y E +MN+ Q +FRR LE W+ + E T+ H+QD+ Sbjct: 3 RERSPRMAVRLPKG---YMPSDDEPFMNKRQKEYFRRKLEKWKEDILKENRETLQHLQDD 59 Query: 66 AANFPDPVDRAAQEEEFSLELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRR 125 + PD DRA+ E E SLELR RDR+RKL+ KI+ ++++++ +GYCE G I ++R Sbjct: 60 SVQHPDIADRASSETERSLELRTRDRQRKLVSKIDAAIRRIDEGTYGYCEETGEPISLKR 119 Query: 126 LEARPTADLCIDCKTLAEIREK 147 L+ARP A L I+ + E REK Sbjct: 120 LDARPIATLSIEAQERHERREK 141 >UniRef50_A1AL35 Transcriptional regulator, TraR/DksA family n=8 Tax=Deltaproteobacteria RepID=A1AL35_PELPD Length = 118 Score = 133 bits (335), Expect = 2e-30, Method: Composition-based stats. Identities = 57/117 (48%), Positives = 76/117 (64%) Query: 32 MNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAANFPDPVDRAAQEEEFSLELRNRDR 91 M +L +FR +L L E +TVT M +++NFPDP DRA QE + + ELR RDR Sbjct: 1 MEAEKLEYFRNVLMEEMKSLLSEAGKTVTEMTADSSNFPDPTDRATQESDRNFELRIRDR 60 Query: 92 ERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAEIREKQ 148 ERKLI KI++ L +++ +FG CE CG EIG RL+ RP LCI+CK AE +EK+ Sbjct: 61 ERKLINKIKEALSRIDSGEFGICEECGDEIGEARLKVRPVTTLCINCKLEAEKKEKR 117 >UniRef50_Q1GI88 Transcriptional regulators TraR/DksA family n=26 Tax=Alphaproteobacteria RepID=Q1GI88_SILST Length = 158 Score = 133 bits (335), Expect = 2e-30, Method: Composition-based stats. Identities = 51/132 (38%), Positives = 84/132 (63%) Query: 16 AIAGVEPYQEKPGEEYMNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAANFPDPVDR 75 + E Y+ E +MNE Q+ +FRR L W+ +L DE T+ +Q+ N PD DR Sbjct: 22 DVFLPEDYRPAEDEPFMNERQMEYFRRKLLNWKAELLDESRDTIEGLQENTRNIPDVADR 81 Query: 76 AAQEEEFSLELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLC 135 A++E + +LELR RDR+RKL+ KI+ ++++++ ++GYC+ G I ++RL+ARP A + Sbjct: 82 ASEETDRALELRTRDRQRKLVAKIDAAIRRIDEGEYGYCDVTGEPISLKRLDARPIATMS 141 Query: 136 IDCKTLAEIREK 147 ++ + E REK Sbjct: 142 LEAQERHERREK 153 >UniRef50_A3RXC3 DnaK suppressor protein n=1 Tax=Ralstonia solanacearum UW551 RepID=A3RXC3_RALSO Length = 224 Score = 132 bits (332), Expect = 4e-30, Method: Composition-based stats. Identities = 60/141 (42%), Positives = 90/141 (63%), Gaps = 4/141 (2%) Query: 10 SSLSILAIAGVEPYQEKPGEEYMNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAANF 69 SS ++L A + +K +YMNEAQLA F+ LE R+ + +T H++ E Sbjct: 87 SSKTLLTEAEILKMSDK---DYMNEAQLAFFKDRLEKLRDDILKNAGQTTEHLR-ETVIV 142 Query: 70 PDPVDRAAQEEEFSLELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEAR 129 PDP DRA EEE +LELR RDRERKL+KK+E++++++++ ++GYC+ G IG+ RL AR Sbjct: 143 PDPADRATIEEEHALELRTRDRERKLLKKVEQSIQRIDEGNYGYCDETGEPIGVPRLLAR 202 Query: 130 PTADLCIDCKTLAEIREKQMA 150 PTA L ++ + E R+K Sbjct: 203 PTATLTLEAQERREKRQKLFG 223 >UniRef50_Q0A892 Transcriptional regulators, TraR/DksA family n=10 Tax=Gammaproteobacteria RepID=Q0A892_ALHEH Length = 149 Score = 130 bits (326), Expect = 2e-29, Method: Composition-based stats. Identities = 58/127 (45%), Positives = 87/127 (68%) Query: 21 EPYQEKPGEEYMNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAANFPDPVDRAAQEE 80 E P E+YMN+ QLA+FR++LE R ++ + ++ T H++D+ + PD DRA EE Sbjct: 19 EQLLASPPEDYMNDEQLAYFRQLLEKERKEILEGLESTTRHLRDDNSREPDEHDRATLEE 78 Query: 81 EFSLELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKT 140 E+ LELR R+RE +L++KI++ L+++E ++GYCE G IGI RL ARPTA L I+ K Sbjct: 79 EYQLELRIRERETRLLRKIDQALRRIETGEYGYCEVTGEPIGIPRLLARPTATLSIEAKE 138 Query: 141 LAEIREK 147 AE+ E+ Sbjct: 139 RAEVEER 145 >UniRef50_B5EG80 Transcriptional regulator, TraR/DksA family n=4 Tax=Proteobacteria RepID=B5EG80_GEOBB Length = 118 Score = 129 bits (325), Expect = 2e-29, Method: Composition-based stats. Identities = 57/116 (49%), Positives = 74/116 (63%) Query: 32 MNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAANFPDPVDRAAQEEEFSLELRNRDR 91 MN +L +FR IL+ + L +E RTV+ M + NFPDP DRA QE + + ELR RDR Sbjct: 1 MNTEKLEYFRGILQEEKRSLLEEAGRTVSEMTSDTTNFPDPTDRATQESDRTFELRIRDR 60 Query: 92 ERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAEIREK 147 ERKLI KI++ L ++E FG CE C +I RL+ARP LCIDCK E +E+ Sbjct: 61 ERKLIVKIQEALARIEAGTFGICEVCEEDISEARLKARPVTTLCIDCKMEQEKKER 116 >UniRef50_B8H0C0 DnaK suppressor protein homolog n=110 Tax=Bacteria RepID=DKSA_CAUCN Length = 142 Score = 129 bits (325), Expect = 3e-29, Method: Composition-based stats. Identities = 54/128 (42%), Positives = 81/128 (63%) Query: 12 LSILAIAGVEPYQEKPGEEYMNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAANFPD 71 + + Y+ E +MN+ QL +F++ L AW+ ++ E TV+H+Q E N D Sbjct: 2 QTATVLVEKSDYRPSEDEPFMNDRQLEYFKQKLLAWKEEILRESRETVSHLQKETENHAD 61 Query: 72 PVDRAAQEEEFSLELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPT 131 DRA+ E + +LELR RDR+RKLI KI++ L++VED +GYCE G IG+ RLEARPT Sbjct: 62 LADRASSETDRALELRTRDRQRKLISKIDQALRRVEDGSYGYCEETGEPIGLARLEARPT 121 Query: 132 ADLCIDCK 139 A + ++ + Sbjct: 122 ATMSVEAQ 129 >UniRef50_B8J371 Transcriptional regulator, TraR/DksA family n=2 Tax=Desulfovibrio RepID=B8J371_DESDA Length = 120 Score = 128 bits (321), Expect = 7e-29, Method: Composition-based stats. Identities = 47/115 (40%), Positives = 68/115 (59%) Query: 32 MNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAANFPDPVDRAAQEEEFSLELRNRDR 91 M+ L +FR++L + + + D T+ + D F DP DRA E + + LR RDR Sbjct: 1 MDHKDLEYFRKLLSGMLEEAQQKGDSTIEELTDSNEVFADPADRATAESDRAFTLRIRDR 60 Query: 92 ERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAEIRE 146 ER+LI+KI+ L +++D +G CE CG +I I RL+ARP LCI+CK E E Sbjct: 61 ERRLIRKIQAALTRIDDGTYGICEDCGDDISIPRLKARPVTRLCINCKAKQEEDE 115 >UniRef50_Q3A0W2 DnaK suppressor protein n=2 Tax=Proteobacteria RepID=Q3A0W2_PELCD Length = 118 Score = 126 bits (317), Expect = 2e-28, Method: Composition-based stats. Identities = 57/116 (49%), Positives = 74/116 (63%) Query: 32 MNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAANFPDPVDRAAQEEEFSLELRNRDR 91 M++ L F+ ILE+ L + +TV+ M D+ +NFPDP DRA+ E + + ELR RDR Sbjct: 1 MDQEALKEFKAILESQLEALLRDAGKTVSEMTDDQSNFPDPTDRASLESDRNFELRIRDR 60 Query: 92 ERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAEIREK 147 ERKLI KI + L+++E FG CE C IG RL ARP LCIDCKT E +EK Sbjct: 61 ERKLIMKIRQALERIEQGTFGECECCEEPIGAERLRARPVTTLCIDCKTEQERKEK 116 >UniRef50_Q1MS84 Molecular chaperone dnaK n=4 Tax=Deltaproteobacteria RepID=Q1MS84_LAWIP Length = 133 Score = 125 bits (313), Expect = 5e-28, Method: Composition-based stats. Identities = 45/115 (39%), Positives = 70/115 (60%) Query: 32 MNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAANFPDPVDRAAQEEEFSLELRNRDR 91 + + + +FR +L + + + D T+ + D F DP DRA+ E + + LR RDR Sbjct: 14 LEQKDIEYFRALLTTMLEEAQHKGDSTLEDLTDGNEIFADPADRASAESDRAFTLRIRDR 73 Query: 92 ERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAEIRE 146 ER+LI+KI+ L++++D +G CE CG +IG RL+ARP LCI+CK+ E E Sbjct: 74 ERRLIRKIQSALQRIDDGTYGVCEDCGDDIGTPRLKARPVTKLCINCKSRQEEGE 128 >UniRef50_B6BSH6 DnaK suppressor protein n=6 Tax=Bacteria RepID=B6BSH6_9RICK Length = 180 Score = 120 bits (302), Expect = 1e-26, Method: Composition-based stats. Identities = 39/126 (30%), Positives = 66/126 (52%), Gaps = 1/126 (0%) Query: 23 YQEKPGEEYMNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQ-DEAANFPDPVDRAAQEEE 81 Y K E+YM E FR L W+ +L + + + D+ + D VD+A+ + Sbjct: 50 YVPKDTEKYMCEKHKVFFRMRLTEWKKELVKANNEALYNGSMDDNSISADIVDQASSYTD 109 Query: 82 FSLELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTL 141 ++E++ +R+ KLI +I+K L ++ ++ +GYC IG++RL ARP A I + Sbjct: 110 KNVEMKAINRQIKLISEIDKALARIREDIYGYCLDTAEPIGLKRLMARPVAKYTIAAQEK 169 Query: 142 AEIREK 147 E EK Sbjct: 170 HEKDEK 175 >UniRef50_C7QCE7 Transcriptional regulator, TraR/DksA family n=1 Tax=Catenulispora acidiphila DSM 44928 RepID=C7QCE7_CATAD Length = 275 Score = 120 bits (302), Expect = 1e-26, Method: Composition-based stats. Identities = 38/140 (27%), Positives = 67/140 (47%), Gaps = 7/140 (5%) Query: 11 SLSILAIAGVEPYQEKPGEEYMNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAANFP 70 S ++ + G+ PY+ GE+ ++ + LE +LR E+ T + D + Sbjct: 138 SQTMAGVGGLPPYRT--GEDPWTPEEVGELQAELEGDAARLRREISTAETGIADLLRDSG 195 Query: 71 -----DPVDRAAQEEEFSLELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRR 125 D D + E E+ + R+++++ E+ L ++ + +G CESCG +G R Sbjct: 196 EGAGDDQADAGTKNFEREHEMAIANNAREMLQQTERALARLAADTYGVCESCGEPVGKYR 255 Query: 126 LEARPTADLCIDCKTLAEIR 145 L+A P A LC+ CK E R Sbjct: 256 LQAFPRATLCMSCKQKQERR 275 >UniRef50_A7H9X1 Transcriptional regulator, TraR/DksA family n=7 Tax=Cystobacterineae RepID=A7H9X1_ANADF Length = 120 Score = 118 bits (295), Expect = 7e-26, Method: Composition-based stats. Identities = 48/120 (40%), Positives = 68/120 (56%), Gaps = 1/120 (0%) Query: 32 MNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQD-EAANFPDPVDRAAQEEEFSLELRNRD 90 MN+ L F+ +LE + QL +T+T + + PD +D A+ E S+ R RD Sbjct: 1 MNKKDLKKFKTMLEESKRQLLLSAKKTLTEEASFDTDDLPDEIDLASSEYTQSMIFRLRD 60 Query: 91 RERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAEIREKQMA 150 RE+ L+ KI+K L ++E+ FG CE C EI ++RLEARP LCI CK E +EK Sbjct: 61 REKFLLAKIDKALARIENGTFGICERCEEEISVKRLEARPVTTLCIRCKEEQEQKEKSFG 120 >UniRef50_B5GH83 DNA-binding protein n=1 Tax=Streptomyces sp. SPB74 RepID=B5GH83_9ACTO Length = 232 Score = 117 bits (293), Expect = 1e-25, Method: Composition-based stats. Identities = 35/125 (28%), Positives = 58/125 (46%), Gaps = 5/125 (4%) Query: 26 KPGEEYMNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAANFPD-----PVDRAAQEE 80 +PGE+ + A R+ LE LR E++ + + D D + Sbjct: 108 RPGEDPWTAEEAAEARQGLEQEIAGLRAELETAEADLASLMRDSADGAGDDEADTGTKNV 167 Query: 81 EFSLELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKT 140 EL R+ +++ E+ L +++ +G CE+CG IG R++A P A LC+DCK Sbjct: 168 TREHELALAAGSRERLEQTERALLRMDAGTYGVCENCGKPIGKARMQAFPHAILCVDCKQ 227 Query: 141 LAEIR 145 +E R Sbjct: 228 KSERR 232 >UniRef50_Q0EXX5 Transcriptional regulators, TraR/DksA family protein n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0EXX5_9PROT Length = 123 Score = 116 bits (291), Expect = 2e-25, Method: Composition-based stats. Identities = 47/119 (39%), Positives = 77/119 (64%), Gaps = 1/119 (0%) Query: 30 EYMNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQD-EAANFPDPVDRAAQEEEFSLELRN 88 + + QLA F + L W+ +L V M + E +FPDP D+A+ E + + +L+ Sbjct: 1 MALTKKQLADFEKQLMDWKAELEIGQSENVQAMTEQEQTSFPDPTDQASMEIDRNFDLKI 60 Query: 89 RDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAEIREK 147 +DRER+LIKKI++ ++++++ +FG C++CG I ++RLEARP LCI+CKT E E+ Sbjct: 61 KDRERRLIKKIDQAIERIQNGEFGECDACGGPISVKRLEARPVTTLCIECKTAQEQEER 119 >UniRef50_Q2SLB9 DnaK suppressor protein n=7 Tax=Gammaproteobacteria RepID=Q2SLB9_HAHCH Length = 141 Score = 114 bits (286), Expect = 9e-25, Method: Composition-based stats. Identities = 48/126 (38%), Positives = 70/126 (55%), Gaps = 1/126 (0%) Query: 26 KPGEEYMNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAANFPDPVDRAAQEEEFSLE 85 P +YM+ QLA F+ L A D + + +F D DRA++EE+ ++ Sbjct: 17 APESDYMSAEQLAFFKDRLMALHESTCDRIQEARDQITGPM-DFSDENDRASREEQSAIA 75 Query: 86 LRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAEIR 145 LR DRE+KL+ KI+++LK++ +GYC G IGI RL ARPTA+ C + K L EI+ Sbjct: 76 LRIVDREQKLLPKIQQSLKRIRLGTYGYCLESGEPIGIPRLLARPTAEYCAEVKALKEIK 135 Query: 146 EKQMAG 151 E Sbjct: 136 EHHYKS 141 >UniRef50_D2L9K5 Transcriptional regulator, TraR/DksA family n=2 Tax=Desulfovibrio RepID=D2L9K5_9DELT Length = 120 Score = 113 bits (284), Expect = 1e-24, Method: Composition-based stats. Identities = 42/115 (36%), Positives = 66/115 (57%) Query: 32 MNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAANFPDPVDRAAQEEEFSLELRNRDR 91 M+ + FR +L + + + + T+ M D + DP DRA E + + LR RDR Sbjct: 1 MDSKDVEFFRELLNGMLHDILKKGEETIEDMTDTVEVYADPADRATAESDRAFTLRLRDR 60 Query: 92 ERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAEIRE 146 ER+LIKKI++ L ++++ +G C CG +I + R++ARP LCI CK+ E E Sbjct: 61 ERRLIKKIKEALDRIDEGTYGECVECGEDISVARMKARPVTTLCIKCKSRQEADE 115 >UniRef50_B1J6V4 Transcriptional regulator, TraR/DksA family n=4 Tax=Pseudomonas RepID=B1J6V4_PSEPW Length = 143 Score = 113 bits (283), Expect = 2e-24, Method: Composition-based stats. Identities = 46/123 (37%), Positives = 72/123 (58%), Gaps = 1/123 (0%) Query: 27 PGEEYMNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAANFPDPVDRAAQEEEFSLEL 86 P E YM+ AQ A FR +L + R +L+D + M+ + DP D EE+ +L Sbjct: 19 PDETYMDAAQQAFFRALLLSQRKELQDRISGEFEAMRQFEPS-SDPSDLGTVEEQRQWQL 77 Query: 87 RNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAEIRE 146 R +RE+KL+ KI++ L+++ ++G+C+ G IG+RRL RPTA L I+ K E RE Sbjct: 78 RLLEREKKLLDKIDEALERLSRGEYGWCKETGEPIGLRRLLLRPTATLSIEAKERQERRE 137 Query: 147 KQM 149 + + Sbjct: 138 RHI 140 >UniRef50_C0QFB9 DksA1 n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QFB9_DESAH Length = 177 Score = 113 bits (282), Expect = 2e-24, Method: Composition-based stats. Identities = 35/125 (28%), Positives = 60/125 (48%), Gaps = 2/125 (1%) Query: 20 VEPYQEKPGEEYMNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAANFPDPVDRAAQE 79 VE Y E YMN+ QL +FR L L + ++ DP D + E Sbjct: 6 VEHYTPSDKEVYMNQRQLQYFRERLLMELEDL--NMVTAHHRAGVQSIGTSDPGDLSFFE 63 Query: 80 EEFSLELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCK 139 + +++L + K +K++ L+++++ +FGYC G IG+ RLE P A L ++ + Sbjct: 64 TKMAMQLTKLNHYHKKLKQVMLALERIDEGNFGYCLLSGNRIGLNRLEVLPWATLAVETQ 123 Query: 140 TLAEI 144 + E Sbjct: 124 EMLER 128 >UniRef50_Q1JWV8 Transcriptional regulators, TraR/DksA family n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JWV8_DESAC Length = 139 Score = 113 bits (282), Expect = 2e-24, Method: Composition-based stats. Identities = 41/128 (32%), Positives = 68/128 (53%) Query: 23 YQEKPGEEYMNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAANFPDPVDRAAQEEEF 82 Y E YMN+ QL +F L+ WR QL+ E M++E + V+++ E + Sbjct: 8 YHPHEEEPYMNQRQLDYFESQLKQWRTQLQQEAHDATREMREENVRAAELVEQSLSEYQR 67 Query: 83 SLELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLA 142 + L + DR+ +L+ +I L ++++ +GYC G EIG+RRL A P A L ++ + Sbjct: 68 RMTLISHDRKSRLLAQINAALLRIKEGSYGYCVETGEEIGLRRLLAYPAAFLLVEVQEAR 127 Query: 143 EIREKQMA 150 E R + A Sbjct: 128 EHRSRSFA 135 >UniRef50_B4U7Z4 Transcriptional regulator, TraR/DksA family n=3 Tax=Aquificaceae RepID=B4U7Z4_HYDS0 Length = 118 Score = 112 bits (280), Expect = 4e-24, Method: Composition-based stats. Identities = 44/115 (38%), Positives = 65/115 (56%) Query: 32 MNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAANFPDPVDRAAQEEEFSLELRNRDR 91 + E QL + +L +N + + +++ + ++D + D +DR E L R DR Sbjct: 2 LTEEQLNELKNMLIEQKNMIIERLEKQIDDVEDVTFSGGDELDRGGLEGSRLLRYRTTDR 61 Query: 92 ERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAEIRE 146 E KL+KKIE TL ++E+ +GYCE CG EI RL+ARP +CI CK L E E Sbjct: 62 ETKLLKKIEYTLARIENGTYGYCEVCGAEIPYERLKARPVTSMCIRCKELEEENE 116 >UniRef50_A8GD52 Transcriptional regulator, TraR/DksA family n=9 Tax=Gammaproteobacteria RepID=A8GD52_SERP5 Length = 141 Score = 111 bits (279), Expect = 5e-24, Method: Composition-based stats. Identities = 46/138 (33%), Positives = 75/138 (54%), Gaps = 1/138 (0%) Query: 12 LSILAIAGVEPYQEKPGEEYMNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAANFPD 71 ++++ + + P +YMN AQ A FR+ L+ + +L ++ + D D Sbjct: 1 MNVVTLLNQQQLLAMPESDYMNPAQRAFFRQRLQDEQQKLLQHIEALKRDI-DGGEVSGD 59 Query: 72 PVDRAAQEEEFSLELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPT 131 D+AA+EE+ L R DRE +L+ KI L ++ + ++GYC G IG+ RL RPT Sbjct: 60 EADKAAREEDLRLLFRQLDRESRLLPKISAALTRLHNGEYGYCRESGEPIGLARLLLRPT 119 Query: 132 ADLCIDCKTLAEIREKQM 149 A+L I+ KT E+RE + Sbjct: 120 AELSIEAKTAQEMREPHL 137 >UniRef50_A5W685 Transcriptional regulator, TraR/DksA family n=11 Tax=Pseudomonas RepID=A5W685_PSEP1 Length = 154 Score = 111 bits (279), Expect = 5e-24, Method: Composition-based stats. Identities = 42/144 (29%), Positives = 73/144 (50%), Gaps = 1/144 (0%) Query: 6 NRKTSSLSILAIAGVEPYQEKPGEEYMNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDE 65 NR + I E ++YMN QLA F +L+A + + + ++ + T + + Sbjct: 9 NRPNAHFFIEKSMTKEQLLAMSADDYMNADQLAFFTELLQAMKVETHERIELSRTTI-EG 67 Query: 66 AANFPDPVDRAAQEEEFSLELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRR 125 DP D A+ EEE S + DR+++L+ ++E L ++ DE FG+C+ G IG++R Sbjct: 68 LDTPSDPADVASVEEERSWLVNAIDRDQRLLPQLEMALDRIADESFGWCDDSGEPIGLKR 127 Query: 126 LEARPTADLCIDCKTLAEIREKQM 149 L PT CI+ + E ++ Sbjct: 128 LLISPTTKYCIEAQERHEQLDRHQ 151 >UniRef50_UPI0001AEC064 DnaK suppressor protein n=1 Tax=Alteromonas macleodii ATCC 27126 RepID=UPI0001AEC064 Length = 140 Score = 111 bits (277), Expect = 1e-23, Method: Composition-based stats. Identities = 48/126 (38%), Positives = 69/126 (54%), Gaps = 1/126 (0%) Query: 26 KPGEEYMNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAANFPDPVDRAAQEEEFSLE 85 ++YMN+ QL F+ +L + Q ++ + D VDRA EEE L Sbjct: 13 ASEDDYMNDEQLEFFKELLNDLKQQTMAHIEEMKASLSQPPE-INDEVDRAQYEEESRLS 71 Query: 86 LRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAEIR 145 LR DRERKL+ KI+K+L++++D+ FGYC G IGI RL RP ++ C D K + E R Sbjct: 72 LRILDRERKLLPKIDKSLRRIKDKSFGYCLETGEPIGIPRLLIRPVSEYCADVKMVNEGR 131 Query: 146 EKQMAG 151 E+ Sbjct: 132 EQHYYS 137 >UniRef50_Q2RK56 Transcriptional regulators, TraR/DksA family n=1 Tax=Moorella thermoacetica ATCC 39073 RepID=Q2RK56_MOOTA Length = 251 Score = 110 bits (276), Expect = 1e-23, Method: Composition-based stats. Identities = 37/123 (30%), Positives = 59/123 (47%), Gaps = 9/123 (7%) Query: 32 MNEAQLAHFRRILEAWRNQLRDEVDRT---------VTHMQDEAANFPDPVDRAAQEEEF 82 M+ LAHFR+ L + L +++D + Q+ + P D +E E Sbjct: 1 MDRQSLAHFRQKLLEEKAGLEEQLDSLNSGGLGESLLESTQELSRYDNHPGDLGTEEFER 60 Query: 83 SLELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLA 142 +L RD + ++KIE L+ + + +GYC CG EI RLEA P LC++C+ Sbjct: 61 GKDLALRDNVQVQLRKIEDALQSIAEGTYGYCRRCGREIPRERLEAIPETTLCLECRRKM 120 Query: 143 EIR 145 E + Sbjct: 121 EGK 123 >UniRef50_C8PIH5 DnaK suppressor protein n=1 Tax=Campylobacter gracilis RM3268 RepID=C8PIH5_9PROT Length = 118 Score = 110 bits (275), Expect = 1e-23, Method: Composition-based stats. Identities = 39/118 (33%), Positives = 64/118 (54%), Gaps = 1/118 (0%) Query: 32 MNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAAN-FPDPVDRAAQEEEFSLELRNRD 90 M + +L +++ILE R QL ++ +V + + N D D A+ + S+E Sbjct: 1 MKKNELKFYKKILEEKREQLIANINSSVNEISELRENKAADDFDVASMNTDLSIEYSLNV 60 Query: 91 RERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAEIREKQ 148 ++K +IE LK++E+ +G CESCG +I + RL+ P A LCI CK AE + + Sbjct: 61 NQQKAFLEIESALKRIENGTYGLCESCGEQISLERLKVNPEARLCISCKEQAEKQNRS 118 >UniRef50_D2L3E3 Transcriptional regulator, TraR/DksA family n=2 Tax=Desulfovibrio RepID=D2L3E3_9DELT Length = 131 Score = 110 bits (275), Expect = 2e-23, Method: Composition-based stats. Identities = 43/112 (38%), Positives = 65/112 (58%) Query: 32 MNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAANFPDPVDRAAQEEEFSLELRNRDR 91 M + FR++L L + T+ + E A F D DRA E + L + R+R Sbjct: 1 MGHLDVDRFRQVLRDMLETLNGQSRDTLDVLAREVAAFADVADRATAESDRHLTILMRER 60 Query: 92 ERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAE 143 +R+LI +I + L +V+D D+G C+ CG EIG+ RL A+PTA LC+ CK++ E Sbjct: 61 DRQLIGEINEALARVKDGDYGICQECGEEIGLARLRAQPTATLCVHCKSMLE 112 >UniRef50_Q9S2X6 Putative DNA-binding protein n=2 Tax=Streptomyces RepID=Q9S2X6_STRCO Length = 239 Score = 109 bits (272), Expect = 3e-23, Method: Composition-based stats. Identities = 35/125 (28%), Positives = 62/125 (49%), Gaps = 5/125 (4%) Query: 26 KPGEEYMNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAANFPD-----PVDRAAQEE 80 +PGEE ++ R L++ ++LR E+D + +Q + D D ++ Sbjct: 114 RPGEEPWTPQEVEEARGELQSEADRLRTEIDTSERSLQGMMRDSGDGAGDDEADTGSKNI 173 Query: 81 EFSLELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKT 140 EL R+++ + E+ L +++ +G CE+CG IG R++A P A LC++CK Sbjct: 174 TREHELALAATAREVLSQTERALDRLDAGTYGLCENCGNPIGKARMQAFPRATLCVECKQ 233 Query: 141 LAEIR 145 E R Sbjct: 234 KQERR 238 >UniRef50_Q67Q17 Putative uncharacterized protein n=1 Tax=Symbiobacterium thermophilum RepID=Q67Q17_SYMTH Length = 269 Score = 109 bits (272), Expect = 3e-23, Method: Composition-based stats. Identities = 32/124 (25%), Positives = 55/124 (44%), Gaps = 9/124 (7%) Query: 36 QLAHFRRILEAWRNQLRDEV---------DRTVTHMQDEAANFPDPVDRAAQEEEFSLEL 86 Q+ R++L R + +V +Q+++ P D + E S +L Sbjct: 2 QIEELRQMLLQEREAYQRQVAMIEETGLGTSQGDQLQEDSTVDNHPADLGTETFERSKDL 61 Query: 87 RNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAEIRE 146 R + I++IE L++++ +G CE CG I RL+A P+A CI C+ E R Sbjct: 62 GLRSHMLRRIQEIESALQRMDQGTYGICEECGRPIDPERLKAFPSATTCITCQQRREARP 121 Query: 147 KQMA 150 + Sbjct: 122 DRFV 125 >UniRef50_D0LZD2 Transcriptional regulator, TraR/DksA family n=3 Tax=Myxococcales RepID=D0LZD2_HALO1 Length = 124 Score = 108 bits (270), Expect = 5e-23, Method: Composition-based stats. Identities = 42/122 (34%), Positives = 64/122 (52%), Gaps = 1/122 (0%) Query: 30 EYMNEAQLAHFRRILEAWRNQLRDEVDRTVTH-MQDEAANFPDPVDRAAQEEEFSLELRN 88 + ++ + FR +LE R + + +RT+ M + + D +D A+ E S E R Sbjct: 3 KPLSAKDIEKFRDLLENKRRLVLERANRTLHEDMTLDPDDLADEMDLASSESYQSFEFRL 62 Query: 89 RDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAEIREKQ 148 R RE+ L+ K++ L+K+ + FG CE C IG +RLEARP LCI CK E E+ Sbjct: 63 RGREKSLLNKLDLALRKLGEGTFGICEVCEEPIGKKRLEARPETTLCIQCKEAQERDERV 122 Query: 149 MA 150 Sbjct: 123 FG 124 >UniRef50_Q0VNX0 DnaK suppressor protein homolog, DksA/TraR family n=2 Tax=Alcanivorax RepID=Q0VNX0_ALCBS Length = 140 Score = 108 bits (269), Expect = 7e-23, Method: Composition-based stats. Identities = 41/122 (33%), Positives = 65/122 (53%), Gaps = 2/122 (1%) Query: 29 EEYMNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAANFPDPVDRAAQEEEFSLELRN 88 +YMN +Q FR+ L A + + ++Q A DP+D A +EE +LR Sbjct: 16 SQYMNASQREFFRKRLLALALECEQHLGNARNNLQTPAQ--ADPLDAAVEEETCRHQLRF 73 Query: 89 RDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAEIREKQ 148 R++ L+ KI L+++++ D+GYC+ G IG+ RL ARPT + C + K E E+ Sbjct: 74 MARQQALLGKIRGALRRLQNGDYGYCKISGDPIGLPRLLARPTTEYCAEVKARLEQNERH 133 Query: 149 MA 150 A Sbjct: 134 YA 135 >UniRef50_A4SHJ5 DnaK suppressor protein n=3 Tax=Gammaproteobacteria RepID=A4SHJ5_AERS4 Length = 128 Score = 107 bits (268), Expect = 9e-23, Method: Composition-based stats. Identities = 37/122 (30%), Positives = 72/122 (59%), Gaps = 1/122 (0%) Query: 30 EYMNEAQLAHFRRILEAWRNQLRDEVDRTVTH-MQDEAANFPDPVDRAAQEEEFSLELRN 88 ++M + QLA ++ +E +L D ++ + + + D +DRA+ EE LEL Sbjct: 3 DFMTKDQLAFYKGQIERQILELEDRLNSQASQAIATDTNEMADEIDRASIEEARRLELNR 62 Query: 89 RDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAEIREKQ 148 + ++ ++K++ L+++ + DFGYCESCG EI ++RL+ARP + C++C++ E + Sbjct: 63 IEHDKLHLRKLQGALRRINEGDFGYCESCGDEISLKRLQARPESRFCVECQSTKEFNDTH 122 Query: 149 MA 150 + Sbjct: 123 VY 124 >UniRef50_Q2GI38 DnaK suppressor protein n=9 Tax=Anaplasmataceae RepID=Q2GI38_EHRCR Length = 152 Score = 106 bits (266), Expect = 2e-22, Method: Composition-based stats. Identities = 43/124 (34%), Positives = 65/124 (52%), Gaps = 1/124 (0%) Query: 24 QEKPGEEYMNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAANFPDPVDRAAQEEEFS 83 +++ YMN QL +FR+ L WR L+ E + T + A+ D D A +E Sbjct: 12 EDEDDSNYMNHKQLEYFRQKLIKWREVLQKESEELATELLRPQAD-ADLTDMATKEHNIV 70 Query: 84 LELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAE 143 L L R R LI +I K +++++D +GYCE G +IGI RLEA P I+ + E Sbjct: 71 LILNTRKRNEALIIEINKAIQRIDDGLYGYCEETGEKIGIARLEANPITLYSIEEQERRE 130 Query: 144 IREK 147 ++K Sbjct: 131 KQQK 134 >UniRef50_Q021M5 Transcriptional regulator, TraR/DksA family n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q021M5_SOLUE Length = 143 Score = 106 bits (265), Expect = 2e-22, Method: Composition-based stats. Identities = 36/126 (28%), Positives = 59/126 (46%), Gaps = 9/126 (7%) Query: 31 YMNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEA-ANFPDPVDRAAQEEEFSLELRNR 89 M +L HFR +L A D + T+ + D A N D +DR E + +R Sbjct: 18 PMTRTELKHFRSVLHAM----LDGTEDTLRTLDDIAIQNVADSLDRIQHATEREMAIRRI 73 Query: 90 DRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAEIRE--- 146 + + ++ + L+++ + +G C C EI +RL+A P C+DC+ A+ R Sbjct: 74 ELDFSKVQSVRSALQRIAEGTYGVCSECDNEIPGKRLKAVPWTPYCLDCQDSADRRRWLS 133 Query: 147 -KQMAG 151 QMAG Sbjct: 134 GAQMAG 139 >UniRef50_C8W4E4 Transcriptional regulator, TraR/DksA family n=1 Tax=Desulfotomaculum acetoxidans DSM 771 RepID=C8W4E4_DESAS Length = 231 Score = 105 bits (263), Expect = 4e-22, Method: Composition-based stats. Identities = 34/122 (27%), Positives = 55/122 (45%), Gaps = 9/122 (7%) Query: 32 MNEAQLAHFRRILEAWRNQLRDEVDR--------TVTHMQDEAANFPD-PVDRAAQEEEF 82 M+ ++ F+ L + +L D V +++ E + + + P D ++ E Sbjct: 1 MDRQKMQAFKETLLKEKKELEDSVHSFDERGLGISLSQATSELSTYDNHPADVGSEVFER 60 Query: 83 SLELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLA 142 S + RD I+ +E LK +E +G C+ CG EIG RL A P LC +CK Sbjct: 61 SKDFALRDDAMLKIRAVEDALKNIEMGKYGICDICGKEIGYARLTALPRTTLCKECKEAQ 120 Query: 143 EI 144 E Sbjct: 121 ER 122 >UniRef50_A9G9K0 Putative dnaK suppressor protein n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9G9K0_SORC5 Length = 167 Score = 104 bits (260), Expect = 7e-22, Method: Composition-based stats. Identities = 35/130 (26%), Positives = 59/130 (45%) Query: 22 PYQEKPGEEYMNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAANFPDPVDRAAQEEE 81 P + + QL R+ LE R L +D +D + D +D A E Sbjct: 37 PETDDSDLPDLTPEQLGELRQALEERRASLVANIDERQHAERDISREVGDEMDEANAEGA 96 Query: 82 FSLELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTL 141 SL + +R+ +++ +I++ L K+++ +G CE G IG RRL+ RP A + + Sbjct: 97 TSLTSKLLERDVRVLAEIDRALAKMKEGSYGMCEGTGEPIGYRRLKLRPWARYSVAYQEQ 156 Query: 142 AEIREKQMAG 151 E E+ G Sbjct: 157 IEREERTGGG 166 >UniRef50_C8X580 Transcriptional regulator, TraR/DksA family n=1 Tax=Desulfohalobium retbaense DSM 5692 RepID=C8X580_DESRD Length = 115 Score = 104 bits (259), Expect = 9e-22, Method: Composition-based stats. Identities = 34/113 (30%), Positives = 58/113 (51%) Query: 32 MNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAANFPDPVDRAAQEEEFSLELRNRDR 91 M+ QL H +L + +L + + + + N DP D+A + L L + R Sbjct: 1 MDREQLHHMNTVLSQKKQELEEAIGQMQNDLATMPHNLADPADQATLSTDRQLALLRQQR 60 Query: 92 ERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAEI 144 + ++E+ L ++ + ++G CE CG EIG+ RL A P+A LCI+C+ E Sbjct: 61 LLHQLHEVEQALHQLANGEYGLCEECGEEIGVPRLVACPSARLCIECQEQLER 113 >UniRef50_A1VXK8 DnaK suppressor protein, putative n=15 Tax=Campylobacter RepID=A1VXK8_CAMJJ Length = 120 Score = 104 bits (259), Expect = 1e-21, Method: Composition-based stats. Identities = 31/118 (26%), Positives = 61/118 (51%), Gaps = 1/118 (0%) Query: 32 MNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAANFP-DPVDRAAQEEEFSLELRNRD 90 M + ++ +F+ ILE + + + + ++ + P D VD + E ++ Sbjct: 1 MKKNEIQNFKNILEERKKAILENLQSNSNEIEALHNSVPSDSVDFSVIETGSQIDFAIST 60 Query: 91 RERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAEIREKQ 148 ++ + +IE +L K+++ +G CESC EI +RL+ +P A CI C+ +AE +K Sbjct: 61 NLKEELIEIEDSLDKIKNGTYGICESCDDEIDSQRLKVKPHARYCITCRQIAEQGKKH 118 >UniRef50_Q1IJ15 Transcriptional regulators, TraR/DksA family n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1IJ15_ACIBL Length = 121 Score = 104 bits (259), Expect = 1e-21, Method: Composition-based stats. Identities = 33/116 (28%), Positives = 55/116 (47%), Gaps = 1/116 (0%) Query: 32 MNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAANFP-DPVDRAAQEEEFSLELRNRD 90 M++ ++ ++ LE R+ LR + +T ++ + D DRA Sbjct: 1 MDKKKIDAIKQQLEKRRDDLRATMVKTAADGREANEDTAQDIADRATNSYTKEFLFTQSA 60 Query: 91 RERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAEIRE 146 +R L++ +E L ++ + +G C SCG EI +RLEA P A CI C+ E E Sbjct: 61 NDRNLLQMVEGALIRIGEGTYGECVSCGSEINSKRLEAVPWARYCIGCQEKIEKGE 116 >UniRef50_C6HWS3 Transcriptional regulator, TraR/DksA family n=3 Tax=Leptospirillum RepID=C6HWS3_9BACT Length = 121 Score = 103 bits (258), Expect = 1e-21, Method: Composition-based stats. Identities = 43/112 (38%), Positives = 66/112 (58%), Gaps = 1/112 (0%) Query: 37 LAHFRRILEAWRNQLRDEVDRTV-THMQDEAANFPDPVDRAAQEEEFSLELRNRDRERKL 95 R ILE + ++ V+RT+ T ++ FPDP D A+ EE R ++RE+KL Sbjct: 4 YEKVREILEQQKREILSGVERTLQTGVEKGVELFPDPADLASVEEIQGFSYRLKEREKKL 63 Query: 96 IKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAEIREK 147 ++KI++ L+++E+ FG CE CG I +R+ ARP CI CKT+ E E+ Sbjct: 64 LRKIDEALERIEEGSFGICERCGEAIEEKRMLARPVTTYCIACKTILEEAER 115 >UniRef50_A1HSA8 Transcriptional regulator, TraR/DksA family n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HSA8_9FIRM Length = 227 Score = 103 bits (258), Expect = 1e-21, Method: Composition-based stats. Identities = 33/120 (27%), Positives = 56/120 (46%), Gaps = 9/120 (7%) Query: 32 MNEAQLAHFRRILEAWRNQLRDEVDRTVTH---------MQDEAANFPDPVDRAAQEEEF 82 M++ + LE + +L ++ R + + + P D + E Sbjct: 1 MDQKDRKPLVQWLEKEKARLLSQISRLEESGIGDTMSDSIGELSVYDNHPADIGDELFER 60 Query: 83 SLELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLA 142 S +L RD L++++E L+KV ++G C++CG EIGI RL+A P A CI C+ Sbjct: 61 SKDLALRDNAHLLLEQVEHALEKVAAGNYGICDNCGREIGIERLQAIPYAARCIVCEKKY 120 >UniRef50_A1SL71 Zinc finger, DksA/TraR C4-type n=4 Tax=Actinomycetales RepID=A1SL71_NOCSJ Length = 283 Score = 103 bits (257), Expect = 2e-21, Method: Composition-based stats. Identities = 38/125 (30%), Positives = 54/125 (43%), Gaps = 5/125 (4%) Query: 26 KPGEEYMNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAANFPD-----PVDRAAQEE 80 K GE +A+L L R + ++ + + D D A Sbjct: 159 KEGEAAWTKAELKEVLDELHEQREHSQRIIEAQEAELDGLMRDSGDGAGQDQADLGATSF 218 Query: 81 EFSLELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKT 140 E EL + ER + +IE+ L +++D +G CESCG IG RL A P A LC+ CK Sbjct: 219 ERDHELTVLNSERDKLAQIERALARIDDGTYGVCESCGNPIGKMRLMAFPRATLCMTCKQ 278 Query: 141 LAEIR 145 E R Sbjct: 279 REERR 283 >UniRef50_B8FT18 Transcriptional regulator, TraR/DksA family n=2 Tax=Desulfitobacterium hafniense RepID=B8FT18_DESHD Length = 222 Score = 103 bits (257), Expect = 2e-21, Method: Composition-based stats. Identities = 31/122 (25%), Positives = 55/122 (45%), Gaps = 5/122 (4%) Query: 32 MNEAQLAHFRRILEAWRNQLRDEVDRTVT-----HMQDEAANFPDPVDRAAQEEEFSLEL 86 M+ ++ A L+ + + +T + + + P D A + E S ++ Sbjct: 1 MDTSKYARLIEQLKKDKEEAWATAQGLITGDMRESIAELSLIDNHPADIATEVYERSRDV 60 Query: 87 RNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAEIRE 146 DR I+ I+ L++ E+ +G CE C EI + RLEA P +C +C L E+ E Sbjct: 61 AIHDRLHHRIQAIDSALQRYEEGKYGLCEHCQKEIPLGRLEALPFTTVCTECSRLEEMEE 120 Query: 147 KQ 148 + Sbjct: 121 QH 122 >UniRef50_B3EAN1 Transcriptional regulator, TraR/DksA family n=8 Tax=Geobacter RepID=B3EAN1_GEOLS Length = 218 Score = 103 bits (256), Expect = 3e-21, Method: Composition-based stats. Identities = 35/149 (23%), Positives = 67/149 (44%), Gaps = 3/149 (2%) Query: 3 EGQNRKTSSLSILAIAGVEPYQEKPGEEYMNEAQLAHFRRILEAWRNQLRDEVDRTVTHM 62 + K ++ A V P + + + ++IL A + Q E+ R++ Sbjct: 49 KAAEPKKKVATVPAEPSVPPTAKTVEASVASGGKWKEIQQILLAMKEQTLLEIKRSIKKG 108 Query: 63 QDEAAN---FPDPVDRAAQEEEFSLELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGV 119 + + D D+A+ E + L L DRER+ + I++ L ++ + ++G CE C Sbjct: 109 SEVSVGEEPTGDIYDQASSERDRELGLLLNDREREKLHSIDEALLRIAEGEYGICEECDE 168 Query: 120 EIGIRRLEARPTADLCIDCKTLAEIREKQ 148 +I + RL+ P C+ CK+ E + Q Sbjct: 169 DIPMGRLKVLPFTRHCVKCKSDLEKFQAQ 197 >UniRef50_A0LTP3 Transcriptional regulators, TraR/DksA family n=7 Tax=Actinomycetales RepID=A0LTP3_ACIC1 Length = 527 Score = 102 bits (255), Expect = 3e-21, Method: Composition-based stats. Identities = 35/123 (28%), Positives = 54/123 (43%), Gaps = 5/123 (4%) Query: 28 GEEYMNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAANFPDPVDRA-----AQEEEF 82 E A+L R LEA +LR E++ + + + + D + E Sbjct: 405 DEYTWTAAELDEIRAQLEAEIVRLRREIEVAESGLAERMRDGGDGAGDDQADAGTKTFER 464 Query: 83 SLELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLA 142 E+ + R L+ + E L ++ D +G CE+CG I RL+A P A LC+ CK Sbjct: 465 EHEMSLANNARDLLVQTEHALARIADGTYGRCENCGNPINKLRLQANPRATLCVSCKQRE 524 Query: 143 EIR 145 E R Sbjct: 525 ERR 527 >UniRef50_B8J655 Transcriptional regulator, TraR/DksA family n=3 Tax=Anaeromyxobacter RepID=B8J655_ANAD2 Length = 122 Score = 102 bits (255), Expect = 3e-21, Method: Composition-based stats. Identities = 51/120 (42%), Positives = 65/120 (54%), Gaps = 4/120 (3%) Query: 32 MNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAAN----FPDPVDRAAQEEEFSLELR 87 MN + +RRIL A L + +R V M D PDP DRA EE + LR Sbjct: 1 MNARETERYRRILAAQLEALVGQGERAVHEMADSEGGGEVAIPDPNDRATAEERRNWALR 60 Query: 88 NRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAEIREK 147 RDR+R+L+ K++ L +++ FG C SCG I RL ARP DLCI CKT AE E+ Sbjct: 61 LRDRDRRLLGKVQAALARLDAGTFGTCTSCGAPISAARLRARPVTDLCIACKTEAERVER 120 >UniRef50_A4V7S0 Putative transcriptional regulator DnaK suppressor protein homolog n=1 Tax=Pseudomonas fluorescens SBW25 RepID=A4V7S0_PSEFS Length = 138 Score = 101 bits (253), Expect = 5e-21, Method: Composition-based stats. Identities = 32/124 (25%), Positives = 58/124 (46%), Gaps = 1/124 (0%) Query: 26 KPGEEYMNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAANFPDPVDRAAQEEEFSLE 85 +P + YM+ QL F+++L + +++L + + D D EE L Sbjct: 11 QPTDNYMDSVQLQFFKQLLLSKQSELTARIVGHEEAVS-VTEKVADSSDAGTIEENRGLL 69 Query: 86 LRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAEIR 145 +R ER I+ L ++E++ +G+C+ G IG++RL PTA + +T E Sbjct: 70 MRILKGERAEAMAIKAALVRIEEDAYGWCDDSGEPIGLKRLLNNPTASRTTEAQTRFERL 129 Query: 146 EKQM 149 K + Sbjct: 130 GKHV 133 >UniRef50_A4J571 Transcriptional regulator, TraR/DksA family n=1 Tax=Desulfotomaculum reducens MI-1 RepID=A4J571_DESRM Length = 234 Score = 101 bits (252), Expect = 7e-21, Method: Composition-based stats. Identities = 31/126 (24%), Positives = 51/126 (40%), Gaps = 9/126 (7%) Query: 32 MNEAQLAHFRRILEAWRNQLRDEVD---------RTVTHMQDEAANFPDPVDRAAQEEEF 82 +++ Q+ ++ L R + D ++ + + P D A + E Sbjct: 2 LDQQQIECYKNKLLNMREHMLDRIEGMNEGGMGESMSDSFGELSTYDNHPGDVATEMFER 61 Query: 83 SLELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLA 142 + R+ + I+ L K+E+ +G CE C EI RLEA P CIDCK+ Sbjct: 62 GKDFALREDAITTLGAIDDALDKMEEGMYGICEVCHQEISQDRLEAIPYTTQCIDCKSRD 121 Query: 143 EIREKQ 148 E K Sbjct: 122 EHLPKS 127 >UniRef50_D0LUD2 Transcriptional regulator, TraR/DksA family n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LUD2_HALO1 Length = 127 Score = 101 bits (251), Expect = 8e-21, Method: Composition-based stats. Identities = 41/118 (34%), Positives = 60/118 (50%), Gaps = 2/118 (1%) Query: 32 MNEAQLAHFRRILEAWRNQLRDEVDRTV--THMQDEAANFPDPVDRAAQEEEFSLELRNR 89 + Q R L R QL D V + + +D D +D + +E +S +LR Sbjct: 2 LTPEQTEELRTRLTTQRRQLVDSVTSAIGFSMDRDRDRVGRDSLDESTEEAMYSTQLRLH 61 Query: 90 DRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAEIREK 147 DRE L+ KI+ L++++ CE CG EI ++RL ARP LCIDCK+ E E+ Sbjct: 62 DRETFLLNKIDAALERLKAGTIDECEECGGEISVQRLIARPVTTLCIDCKSEREQSEE 119 >UniRef50_D1X2L9 Transcriptional regulator, TraR/DksA family n=5 Tax=Streptomyces RepID=D1X2L9_9ACTO Length = 248 Score = 101 bits (251), Expect = 1e-20, Method: Composition-based stats. Identities = 32/125 (25%), Positives = 59/125 (47%), Gaps = 5/125 (4%) Query: 26 KPGEEYMNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAANFPD-----PVDRAAQEE 80 +PGE+ ++A R +L + +LR E++ + + + D D + Sbjct: 123 RPGEDPWTPEEVAEARTLLTSETLRLRSELEASGAALAGLMRDSGDGAGDDEADTGTKNI 182 Query: 81 EFSLELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKT 140 EL ++++++ E+ L ++E +G CE CG IG R++A P A LC++ K Sbjct: 183 TREHELSLAANAQEMLEQTERALARLEAGTYGLCEICGKPIGKARMQAFPRATLCVEDKQ 242 Query: 141 LAEIR 145 E R Sbjct: 243 KQERR 247 >UniRef50_A8EWK7 DnaK suppressor protein DksA n=1 Tax=Arcobacter butzleri RM4018 RepID=A8EWK7_ARCB4 Length = 123 Score = 101 bits (251), Expect = 1e-20, Method: Composition-based stats. Identities = 30/114 (26%), Positives = 59/114 (51%), Gaps = 1/114 (0%) Query: 33 NEAQLAHFRRILEAWRNQLRDEVDRTVTHM-QDEAANFPDPVDRAAQEEEFSLELRNRDR 91 N+ Q+ + IL + + V+ + ++ Q + + D +D A + +E + Sbjct: 3 NKTQIDELKAILLERKENILSHVNSSRENIDQLKEQDINDDLDYAELVSDSFIEGMITNH 62 Query: 92 ERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAEIR 145 + +K+IE+ LKK+ +G C+ CG+ I + RL+A+P A C +C+T+ E Sbjct: 63 QLDELKQIEEALKKITLGTYGICDMCGINIPLGRLKAKPFAKFCTECRTVYEQE 116 >UniRef50_B2V8G8 Transcriptional regulator, TraR/DksA family n=4 Tax=Hydrogenothermaceae RepID=B2V8G8_SULSY Length = 118 Score = 100 bits (250), Expect = 1e-20, Method: Composition-based stats. Identities = 46/107 (42%), Positives = 63/107 (58%), Gaps = 2/107 (1%) Query: 30 EYMNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAANFPDPVDRAAQEEEFSLELRNR 89 +++ Q+ + IL WRNQL ++ R + D ++RA E L LRN Sbjct: 2 QHLTPEQIEELKNILLEWRNQLIEDTKRNTGEA--LSFEGADEMERAEAETSRILTLRNL 59 Query: 90 DRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCI 136 DRERKL+K+IE+TL+K+E +G CESCG EI RL+ RP A LCI Sbjct: 60 DRERKLLKRIEQTLQKIEYGVYGICESCGAEIPYERLKVRPIASLCI 106 >UniRef50_B8CWL7 Transcriptional regulator, TraR/DksA family n=1 Tax=Halothermothrix orenii H 168 RepID=B8CWL7_HALOH Length = 228 Score = 100 bits (250), Expect = 1e-20, Method: Composition-based stats. Identities = 31/123 (25%), Positives = 56/123 (45%), Gaps = 8/123 (6%) Query: 32 MNEAQLAHFRRILEAWRNQLRDEVD--------RTVTHMQDEAANFPDPVDRAAQEEEFS 83 M+ + +R++L +N L E+ + ++ P D+ + + Sbjct: 1 MDRTKEKKYRQLLINEKNSLLHELKHFSDDEFASVKDSTGELSSYDNHPADQGSNTYDRE 60 Query: 84 LELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAE 143 + RD + L+ K+E L ++E+ ++G CE CG EI RLE P A LC C+ E Sbjct: 61 KDRGLRDNAQVLLNKVENALNRLEEGNYGLCEKCGQEIREERLETIPYATLCERCQAKEE 120 Query: 144 IRE 146 ++ Sbjct: 121 GKD 123 >UniRef50_C5EYJ0 DnaK suppressor protein n=4 Tax=Helicobacter RepID=C5EYJ0_9HELI Length = 119 Score = 100 bits (249), Expect = 2e-20, Method: Composition-based stats. Identities = 32/113 (28%), Positives = 58/113 (51%) Query: 32 MNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAANFPDPVDRAAQEEEFSLELRNRDR 91 M + ++ ++ILE + + D M++ D D AA + +L+ + Sbjct: 1 MQQTEIEALKKILETKKKAILDNNFDHQKSMENLRGISLDEADEAAMSMKNTLDGLIFEH 60 Query: 92 ERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAEI 144 K ++ IE+ L+K+E+ ++G CE C I I+RL+A+P A CI C+ + E Sbjct: 61 HHKELEYIERALEKIENGEYGICEMCDEPISIQRLKAKPHARFCIICREIVEK 113 >UniRef50_B1I4J4 Transcriptional regulator, TraR/DksA family n=1 Tax=Candidatus Desulforudis audaxviator MP104C RepID=B1I4J4_DESAP Length = 212 Score = 100 bits (248), Expect = 2e-20, Method: Composition-based stats. Identities = 33/129 (25%), Positives = 61/129 (47%), Gaps = 8/129 (6%) Query: 28 GEEYMNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQ--------DEAANFPDPVDRAAQE 79 G + ++ A+L R L R ++ E++ M + + P D A++ Sbjct: 2 GSDKVDSAKLEQLRVRLLRERAAVQREINAIQQTMDVALEDTIGELSTYDNHPADIASET 61 Query: 80 EEFSLELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCK 139 E S + R+ R + +E L +++ +G C+ CGV+I + RLEA P C +CK Sbjct: 62 FERSKDFALRENARFRLLAVEDALARMDRGTYGRCDECGVDIDLERLEAVPFTTKCRECK 121 Query: 140 TLAEIREKQ 148 AE ++++ Sbjct: 122 ARAEGKDER 130 >UniRef50_B1H0G2 Putative dnaK suppressor n=1 Tax=uncultured Termite group 1 bacterium phylotype Rs-D17 RepID=B1H0G2_UNCTG Length = 119 Score = 100 bits (248), Expect = 2e-20, Method: Composition-based stats. Identities = 29/113 (25%), Positives = 53/113 (46%), Gaps = 1/113 (0%) Query: 32 MNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEA-ANFPDPVDRAAQEEEFSLELRNRD 90 MN+ LA ++IL + +++ + + D++ + D +D A+Q E + Sbjct: 1 MNKKDLASLKKILIQKKMDFLNKMSKAQRGIYDDSNTSVGDEIDTASQNSEKEMYFELVA 60 Query: 91 RERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAE 143 ++ + I L K+E +G CE C I + RL+ P A CI C+ +E Sbjct: 61 SDKMTLDAINDALVKIEKNAYGKCEGCSNNILLERLKVIPWAKYCIQCQEESE 113 >UniRef50_C1DXT7 Transcriptional regulator, TraR/DksA family n=5 Tax=Aquificales RepID=C1DXT7_SULAA Length = 144 Score = 100 bits (248), Expect = 2e-20, Method: Composition-based stats. Identities = 34/109 (31%), Positives = 48/109 (44%) Query: 36 QLAHFRRILEAWRNQLRDEVDRTVTHMQDEAANFPDPVDRAAQEEEFSLELRNRDRERKL 95 L R L RNQ+ ++ + +E D D E R +R+ Sbjct: 2 DLETIREKLLEKRNQILKSLEESAKSDINEKTGVGDDADTVTDELSRETHYRLTQADRET 61 Query: 96 IKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAEI 144 + I+ L+K++ +G CE CG IG +RLEA P LCIDC EI Sbjct: 62 LYLIDLALRKIDSGIYGICEECGAVIGEKRLEAIPWVRLCIDCSQNEEI 110 >UniRef50_B0K2T3 Transcriptional regulator, TraR/DksA family n=10 Tax=Thermoanaerobacteraceae RepID=B0K2T3_THEPX Length = 206 Score = 99.6 bits (247), Expect = 2e-20, Method: Composition-based stats. Identities = 30/130 (23%), Positives = 58/130 (44%), Gaps = 11/130 (8%) Query: 32 MNEAQLAHFRRILEAWRNQLRDEVDRT-----------VTHMQDEAANFPDPVDRAAQEE 80 M+ +L HFR++L + ++ +++ + Q+ + P D A++ Sbjct: 1 MDSEKLEHFRQLLLKEKEKVLSTINQMNLNDGIGGIAQREYYQELSLLDNHPADFASEVY 60 Query: 81 EFSLELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKT 140 E +D E+ ++++IE K++E +G C C I RLEA P LC +C Sbjct: 61 EVEKNYALKDNEKYILRQIEDAFKRMEIGTYGICAHCHKPIEEERLEALPYTVLCAECAK 120 Query: 141 LAEIREKQMA 150 ++ K + Sbjct: 121 NNDLELKDLK 130 >UniRef50_Q01TC0 Transcriptional regulator, TraR/DksA family n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q01TC0_SOLUE Length = 136 Score = 99.3 bits (246), Expect = 3e-20, Method: Composition-based stats. Identities = 27/108 (25%), Positives = 50/108 (46%), Gaps = 1/108 (0%) Query: 37 LAHFRRILEAWRNQLRDEVDRTVTHMQDEAAN-FPDPVDRAAQEEEFSLELRNRDRERKL 95 + HF+ L + R +L D + R ++ + DP+DR+ + L N + + Sbjct: 18 VEHFKEKLLSKRRELVDAIGRAEQEVRTASEGEVGDPLDRSVDDTAADEGLHNSSVDSET 77 Query: 96 IKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAE 143 +++++ L+++E +G C CG I RLEA P C + E Sbjct: 78 LQQVDDALRRIEQGSYGKCVICGKPIEPARLEAIPWTPYCKADQERLE 125 >UniRef50_B0TGP7 Putative uncharacterized protein n=1 Tax=Heliobacterium modesticaldum Ice1 RepID=B0TGP7_HELMI Length = 238 Score = 98.9 bits (245), Expect = 4e-20, Method: Composition-based stats. Identities = 29/110 (26%), Positives = 52/110 (47%), Gaps = 9/110 (8%) Query: 43 ILEAWRNQLRDEV---------DRTVTHMQDEAANFPDPVDRAAQEEEFSLELRNRDRER 93 L A +RD++ + +Q+ + P D ++ E +L RDR Sbjct: 11 RLNAMETDIRDQLTHMTQDALGESMGESIQELSLYDNHPADVGSEVYERGKDLATRDRFS 70 Query: 94 KLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAE 143 + + +I K +++ + +G CE C +I R+ A PTA LCI+C++ E Sbjct: 71 RELDEIAKAKRRISEGIYGICERCHQKIPDARMAAMPTATLCIECQSHEE 120 >UniRef50_C6PE95 Transcriptional regulator, TraR/DksA family n=1 Tax=Thermoanaerobacterium thermosaccharolyticum DSM 571 RepID=C6PE95_CLOTS Length = 207 Score = 98.9 bits (245), Expect = 5e-20, Method: Composition-based stats. Identities = 28/125 (22%), Positives = 56/125 (44%), Gaps = 11/125 (8%) Query: 32 MNEAQLAHFRRILEAWRNQLRDEVDRT-----------VTHMQDEAANFPDPVDRAAQEE 80 M++ +L HFR+ L +N + ++ + Q+ + P D ++ Sbjct: 1 MDDEKLEHFRKKLIEEKNNILHTLNEMDDNDGTGRMAEREYYQELSLADNHPADIGSEVY 60 Query: 81 EFSLELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKT 140 E +D E+ ++++I+ L ++ +G C C EI + RLEA P LC +C Sbjct: 61 EIEKNYALKDNEQHVLRQIDDALLRMVKGQYGICNHCHKEIELDRLEALPYTSLCANCAK 120 Query: 141 LAEIR 145 +++ Sbjct: 121 NNDLK 125 >UniRef50_Q30RD2 Transcriptional regulators, TraR/DksA family n=3 Tax=Epsilonproteobacteria RepID=Q30RD2_SULDN Length = 116 Score = 98.5 bits (244), Expect = 6e-20, Method: Composition-based stats. Identities = 32/114 (28%), Positives = 59/114 (51%), Gaps = 1/114 (0%) Query: 32 MNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAA-NFPDPVDRAAQEEEFSLELRNRD 90 M E++L +F+ ILE+ + Q+ + + ++ D D A+ + +E Sbjct: 1 MQESELKYFKEILESRKEQIIKNIRGVNEELSQLSSLELKDEGDHASVDNSSMIESAIVH 60 Query: 91 RERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAEI 144 ++ + +++I TL K+ D+G CE C IG +RL+ +P A CIDC+ + E Sbjct: 61 QQEQELREINVTLGKIATGDYGICEMCEDPIGFQRLKVKPHAIYCIDCREIVEK 114 >UniRef50_A4XDN2 Zinc finger, DksA/TraR C4-type n=5 Tax=Actinomycetales RepID=A4XDN2_SALTO Length = 139 Score = 98.5 bits (244), Expect = 6e-20, Method: Composition-based stats. Identities = 36/119 (30%), Positives = 63/119 (52%), Gaps = 6/119 (5%) Query: 33 NEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAANF------PDPVDRAAQEEEFSLEL 86 + A+ R L A R++LR E D+T++ + + + D D + E E+ Sbjct: 21 SAAETEKIRAALAARRDELRAEYDQTLSEITELQRDRLTDSAGDDQADTGTKTFEREQEI 80 Query: 87 RNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAEIR 145 + + I ++E+ L+++++ +G+CE CG I + RL A P+A LC+ CK LAE R Sbjct: 81 SLANSILERITQVERALERLDEGGYGWCERCGNPIPVERLAAFPSATLCVTCKQLAERR 139 >UniRef50_Q2YD37 Transcriptional regulators, TraR/DksA family n=2 Tax=Nitrosomonadaceae RepID=Q2YD37_NITMU Length = 131 Score = 98.5 bits (244), Expect = 6e-20, Method: Composition-based stats. Identities = 38/118 (32%), Positives = 58/118 (49%), Gaps = 5/118 (4%) Query: 32 MNEAQLAHFRRILEAWRNQLRDEVDRTVT-----HMQDEAANFPDPVDRAAQEEEFSLEL 86 E QLA + +L+ QLR+EV + H D A + DP D + + + Sbjct: 4 FTEEQLAQLKEVLQQRYLQLREEVRDELESSGDQHYADLAGSVADPGDASVADMLVDVGA 63 Query: 87 RNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAEI 144 DR+ ++++E LK++ D D+G C CG EIG RL PTA C+ C+ + E Sbjct: 64 NLVDRQVNEMREVEAALKRLADLDYGDCIDCGGEIGFDRLMVYPTAQRCVRCQEVHEK 121 >UniRef50_B2A2J0 Transcriptional regulator, TraR/DksA family n=1 Tax=Natranaerobius thermophilus JW/NM-WN-LF RepID=B2A2J0_NATTJ Length = 216 Score = 98.1 bits (243), Expect = 7e-20, Method: Composition-based stats. Identities = 28/115 (24%), Positives = 54/115 (46%), Gaps = 8/115 (6%) Query: 32 MNEAQLAHFRRILEAWRNQLR--------DEVDRTVTHMQDEAANFPDPVDRAAQEEEFS 83 M + ++ +R+ L + + L D ++ + ++ P D +++ E Sbjct: 1 MTDQEIEKYRQKLLSIKADLEKHEAEGQHDNRTSIRDNVSELSSYDNHPGDLGSEQYELE 60 Query: 84 LELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDC 138 + + + +++IE L+K+ + D+G CESCG EI RL+A P CI C Sbjct: 61 KDTTLSNLREQKLREIEIALEKIANGDYGKCESCGKEINNERLDAVPYTRYCISC 115 >UniRef50_UPI0001788757 transcriptional regulator, TraR/DksA family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001788757 Length = 187 Score = 98.1 bits (243), Expect = 8e-20, Method: Composition-based stats. Identities = 26/126 (20%), Positives = 58/126 (46%), Gaps = 9/126 (7%) Query: 32 MNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEA---------ANFPDPVDRAAQEEEF 82 M + Q + R+ L + + +L ++++ +D + A P D + E Sbjct: 4 MTKQQYSELRQRLLSDKERLENQLESREDTNKDLSLRDSTGELSAADNHPADVGTEVFER 63 Query: 83 SLELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLA 142 +L ++ + +++I+ L++++ ++G C CG EI RLEA P C++ Sbjct: 64 GRDLAIQETLERELEQIDAALQRMDQGEYGTCAECGREIPYERLEALPYTAYCLEHTPRK 123 Query: 143 EIREKQ 148 +I + + Sbjct: 124 DINDNR 129 >UniRef50_B4D0A5 Transcriptional regulator, TraR/DksA family n=2 Tax=Verrucomicrobia RepID=B4D0A5_9BACT Length = 233 Score = 97.7 bits (242), Expect = 9e-20, Method: Composition-based stats. Identities = 30/131 (22%), Positives = 55/131 (41%), Gaps = 7/131 (5%) Query: 24 QEKPGEEYMNEAQLAHFRRILEAWRNQLRDEVD-------RTVTHMQDEAANFPDPVDRA 76 + P ++ + L + L R+ + D + RT + +A D Sbjct: 70 KPAPPKKVVLTPFLIKQKDRLLQLRDSMLDSMMGVAKDNLRTRAEGSEASAFGMHQADAG 129 Query: 77 AQEEEFSLELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCI 136 + + L +E+ + +IE+ LK++E +G CE G I RLEA P A + Sbjct: 130 SDAYDRDFALSLLSQEQDALYEIEEALKRIELGTYGVCEMSGKPIAHPRLEALPFARYTV 189 Query: 137 DCKTLAEIREK 147 +C++ E + K Sbjct: 190 ECQSQIEKQGK 200 >UniRef50_C0ZG84 Putative uncharacterized protein yteA n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZG84_BREBN Length = 257 Score = 97.7 bits (242), Expect = 9e-20, Method: Composition-based stats. Identities = 29/112 (25%), Positives = 55/112 (49%), Gaps = 7/112 (6%) Query: 33 NEAQLAHFRRILEAWRNQLRDEVDRT-------VTHMQDEAANFPDPVDRAAQEEEFSLE 85 ++ +A FR L + +L D V T +Q+ + P D ++ E + Sbjct: 6 DQKMVASFREKLLEQKKELEDRVQDHYGMREPMTTSLQEFSMYDNHPADIGSEMFEREKD 65 Query: 86 LRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCID 137 L +R+ +K+I++ L+++E+ +G C CG +I + RLEA P + C + Sbjct: 66 LALDSLDRETLKEIDQALQRMEEGTYGLCTVCGEQIPVERLEALPQSQTCKE 117 >UniRef50_A5D3H2 Putative uncharacterized protein n=1 Tax=Pelotomaculum thermopropionicum SI RepID=A5D3H2_PELTS Length = 242 Score = 97.3 bits (241), Expect = 1e-19, Method: Composition-based stats. Identities = 31/127 (24%), Positives = 54/127 (42%), Gaps = 9/127 (7%) Query: 30 EYMNEAQLAHFRRILEAWRNQLRDEVD---------RTVTHMQDEAANFPDPVDRAAQEE 80 E + + L F++ L R L +D + + + P D ++ Sbjct: 4 EAVQQEMLMKFKQRLLDERENLTRRIDFIDGQGLGVAMEDSIGELSTCDNHPADIGSELF 63 Query: 81 EFSLELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKT 140 E S + R+ + I++ L K+E+ +G C++CG EI + RLEA P+ C CK Sbjct: 64 ERSKDFALRENAMLAVAAIDRALAKIENGTYGKCDNCGREIPLERLEAVPSTVCCKKCKE 123 Query: 141 LAEIREK 147 E + Sbjct: 124 AEEKNTR 130 >UniRef50_B8DQJ2 Transcriptional regulator, TraR/DksA family n=1 Tax=Desulfovibrio vulgaris str. 'Miyazaki F' RepID=B8DQJ2_DESVM Length = 142 Score = 97.3 bits (241), Expect = 1e-19, Method: Composition-based stats. Identities = 37/129 (28%), Positives = 61/129 (47%), Gaps = 5/129 (3%) Query: 15 LAIAGVEPYQEKPGEEYMNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAANFPDPVD 74 + G E M + A RR LEA LR ++ ++ D + Sbjct: 3 RSPRGPPASAAPRKERAMTDRHHAEIRRRLEAELTHLRRQL-----LVEGGVEACADENE 57 Query: 75 RAAQEEEFSLELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADL 134 A++ E +L + DR + I++IE L+ ++ D+G C++CG +I + RL ARPT L Sbjct: 58 FASRVSELTLSMTLLDRAGRRIREIEGVLRAMDSRDYGVCDACGDDIPLPRLLARPTTRL 117 Query: 135 CIDCKTLAE 143 C+ C+ E Sbjct: 118 CVHCQMEQE 126 >UniRef50_C0GJQ4 Transcriptional regulator, TraR/DksA family n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GJQ4_9FIRM Length = 203 Score = 97.3 bits (241), Expect = 1e-19, Method: Composition-based stats. Identities = 30/121 (24%), Positives = 61/121 (50%), Gaps = 10/121 (8%) Query: 32 MNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAANFP---------DPVDRAAQEEEF 82 M++ + H R LE + L ++ + T + E P D ++ E Sbjct: 1 MDKNLIRH-RLQLEQLKKDLLEQTEFTEGMQEHEGLRDATQELSVIDNHPADVGSENYER 59 Query: 83 SLELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLA 142 + ++ ++ + ++ K+E+ L+K++++ +G CE+CG I RL+A P A+ C+ CK + Sbjct: 60 AKDISLHEKNQMVLDKVEEALEKLDNDIYGMCENCGKPIPEERLDALPYAEFCVQCKKKS 119 Query: 143 E 143 E Sbjct: 120 E 120 >UniRef50_Q97H97 General stress protein, DnaK suppressor DskA, YTEA B.subtilis ortholog n=1 Tax=Clostridium acetobutylicum RepID=Q97H97_CLOAB Length = 200 Score = 97.3 bits (241), Expect = 1e-19, Method: Composition-based stats. Identities = 30/119 (25%), Positives = 53/119 (44%), Gaps = 9/119 (7%) Query: 32 MNEAQLAHFRRILEAWRNQLRDEVDRTVTH---------MQDEAANFPDPVDRAAQEEEF 82 M++ +L +F+ L R L + +++ + + + P D A++ + Sbjct: 1 MDKKKLDYFKNKLMFERKSLMELIEQMRKNDTIDSKMEIASELSYYDNHPSDLASEFNDI 60 Query: 83 SLELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTL 141 + R E L+ KI + KVE +G CE CG I RLE P A+ C++C+ Sbjct: 61 QRGMAFRKNEEALLNKIGNAIDKVEHGGYGICEVCGKPISEERLEFVPYAENCVECQNK 119 >UniRef50_B5YK78 RNA polymerase-binding protein DksA n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YK78_THEYD Length = 123 Score = 97.3 bits (241), Expect = 1e-19, Method: Composition-based stats. Identities = 47/81 (58%), Positives = 58/81 (71%) Query: 67 ANFPDPVDRAAQEEEFSLELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRL 126 +N + D A+QE + S LR RDRERKL+KKIEKTL+K+ + +G CE+CG EI I RL Sbjct: 39 SNLSEIGDIASQEIDRSFLLRLRDRERKLLKKIEKTLEKINNGTYGICEACGAEIPIERL 98 Query: 127 EARPTADLCIDCKTLAEIREK 147 EARP DLCI+CKT E EK Sbjct: 99 EARPVTDLCIECKTEQEEAEK 119 >UniRef50_A3DD29 Transcriptional regulators, TraR/DksA family n=5 Tax=Clostridium RepID=A3DD29_CLOTH Length = 212 Score = 97.3 bits (241), Expect = 1e-19, Method: Composition-based stats. Identities = 32/121 (26%), Positives = 55/121 (45%), Gaps = 9/121 (7%) Query: 32 MNEAQLAHFRRILEAWRNQLRDEVD---------RTVTHMQDEAANFPDPVDRAAQEEEF 82 M++++ FR++L + + ++ + V + + P + Q + Sbjct: 1 MDDSKKEFFRQLLVEEKKNIERTINLMEEHGISKQNVESADELSGYDNHPAELGTQLFQT 60 Query: 83 SLELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLA 142 L + E +L++ I + L K++ FG CE CG EI RLEA P LCIDC+ Sbjct: 61 ELNNALKVHEERLLEDINEALTKMDKGSFGKCELCGKEIDEERLEALPYTRLCIDCENAK 120 Query: 143 E 143 E Sbjct: 121 E 121 >UniRef50_B9L783 Transcriptional regulator, TraR/DksA family n=1 Tax=Nautilia profundicola AmH RepID=B9L783_NAUPA Length = 117 Score = 96.9 bits (240), Expect = 2e-19, Method: Composition-based stats. Identities = 29/117 (24%), Positives = 54/117 (46%), Gaps = 1/117 (0%) Query: 32 MNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQD-EAANFPDPVDRAAQEEEFSLELRNRD 90 MN + ++ +L + +L ++ ++D D D AA + + + Sbjct: 1 MNMKKYHLYKEMLLMRKAELEKILNSLSDEIKDINKCEINDEADFAAASMDSGRDYQIYI 60 Query: 91 RERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAEIREK 147 ++K +++I LKK+++ FG CE C I RL+ +P A CI C+ + E K Sbjct: 61 NQKKELEEINDALKKIDEGTFGICEMCEDPIQEARLKIKPYAKYCIICREIIEKEGK 117 >UniRef50_A6WCW5 Transcriptional regulator, TraR/DksA family n=10 Tax=Actinomycetales RepID=A6WCW5_KINRD Length = 159 Score = 96.6 bits (239), Expect = 2e-19, Method: Composition-based stats. Identities = 32/123 (26%), Positives = 54/123 (43%), Gaps = 4/123 (3%) Query: 27 PGEEYMNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAANF----PDPVDRAAQEEEF 82 EE A+L R L+ ++L E+ + + D VD A Sbjct: 37 DSEEAWTPAELDEVRVELQLEIDRLSAELAEASSSFSALVRSGEGAGDDQVDHGATTAGR 96 Query: 83 SLELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLA 142 E+ + R+L+++ ++ L ++ +G CESC +G RL+A P LC+ CK+ Sbjct: 97 EHEMTIVNNARELLEQTQRALVRLGSGVYGVCESCDGPVGKARLQAFPRVTLCVRCKSRG 156 Query: 143 EIR 145 E R Sbjct: 157 ERR 159 >UniRef50_C1I8K1 Putative uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=C1I8K1_9CLOT Length = 204 Score = 96.6 bits (239), Expect = 2e-19, Method: Composition-based stats. Identities = 27/116 (23%), Positives = 54/116 (46%), Gaps = 9/116 (7%) Query: 32 MNEAQLAHFRRILEAWRNQLRDEVDRTVTH---------MQDEAANFPDPVDRAAQEEEF 82 MN+ +L +++ L + ++ D +++ + + + P D A++ E Sbjct: 1 MNKEELTYYKNKLNQEKKRITDLINQLDDNGVTRFNAEVASELSFYDNHPSDIASETFEV 60 Query: 83 SLELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDC 138 ER L+ KI+ ++ +++ +G C+ CG EI RL+ P A CI+C Sbjct: 61 EKGRALEANERALLDKIDDAVRAIDEGSYGKCQKCGKEIDKERLDFLPYALNCIEC 116 >UniRef50_B3DUR8 DnaK suppressor protein n=1 Tax=Methylacidiphilum infernorum V4 RepID=B3DUR8_METI4 Length = 249 Score = 95.8 bits (237), Expect = 4e-19, Method: Composition-based stats. Identities = 30/145 (20%), Positives = 60/145 (41%), Gaps = 4/145 (2%) Query: 1 MQEGQNRKTSSLSILAIAGVEPYQEKPGEEYMNEAQLAHFRRILEAWRNQLRDEVDRTVT 60 + E + +L+I+ + P +E+ + + +L R + + +V ++ Sbjct: 71 VSEKIDMSNPNLTIMDL----PEEERKEFLRVQKERLLDLREQIIEQMEGVSSDVLKSRP 126 Query: 61 HMQDEAANFPDPVDRAAQEEEFSLELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVE 120 + D + L +E + +I+ +LK++ED +G C+ CG Sbjct: 127 EGGESTGFGVHQADAGTDVYDRDFALSLLSQENDSLIEIDDSLKRIEDNTYGICQMCGKP 186 Query: 121 IGIRRLEARPTADLCIDCKTLAEIR 145 I I RL+A P A +DC+ E Sbjct: 187 IPIIRLQAIPYARFTVDCQRQLEKE 211 >UniRef50_Q01U65 Transcriptional regulator, TraR/DksA family n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q01U65_SOLUE Length = 129 Score = 95.8 bits (237), Expect = 4e-19, Method: Composition-based stats. Identities = 33/115 (28%), Positives = 56/115 (48%), Gaps = 3/115 (2%) Query: 32 MNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAANFPDPVDRAAQEEEFSLELRNRDR 91 M + +L ++ +LEA + +L + ++ PD +D E L +RN DR Sbjct: 1 MTQTELNKYKAMLEAKQAELSAGLRNREDIAIEKT---PDAIDEVQLAGERELAIRNLDR 57 Query: 92 ERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAEIRE 146 E L++ ++ L +V D +G C C +I +RL+A P CI C+ A+ E Sbjct: 58 ESNLLRNVKGALVRVADGSYGVCMHCEEDIKPKRLDAVPWTKYCIKCQEAADRHE 112 >UniRef50_Q253H0 DnaK suppressor n=16 Tax=Chlamydiales RepID=Q253H0_CHLFF Length = 124 Score = 95.8 bits (237), Expect = 4e-19, Method: Composition-based stats. Identities = 24/118 (20%), Positives = 58/118 (49%), Gaps = 3/118 (2%) Query: 30 EYMNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQ---DEAANFPDPVDRAAQEEEFSLEL 86 ++E ++A+F+ L +++L ++ ++ + D+ + ++ L Sbjct: 1 MPLSEEEIANFKHRLLEMKHKLSHTLEGNAQEVKKPNEATGYSQHQADQGTDTFDRTISL 60 Query: 87 RNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAEI 144 +E +L+++I + L+K+E+ +G C+ G EI + RL A P A + + ++ E Sbjct: 61 EVTTKEYELLRQINRALEKIEESSYGICDVSGEEIPLARLMAIPYATMTVKAQSQFEK 118 >UniRef50_A0RMM0 Transcriptional regulators, TraR/DksA family n=9 Tax=Campylobacterales RepID=A0RMM0_CAMFF Length = 122 Score = 95.8 bits (237), Expect = 4e-19, Method: Composition-based stats. Identities = 31/118 (26%), Positives = 57/118 (48%), Gaps = 1/118 (0%) Query: 32 MNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQD-EAANFPDPVDRAAQEEEFSLELRNRD 90 M ++ L F+ +LE + Q+ + + + D D A+ + LE Sbjct: 1 MRQSDLEFFKNLLEERKIQINKNILDAADEINGLRQSGASDEFDFASINADAILEHSISA 60 Query: 91 RERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAEIREKQ 148 ++R + +I+++LKK+ + +G C+ C EI I RL+ +P A CI C+ + E K Sbjct: 61 KQRSELNEIDESLKKIANRTYGICDMCEDEIDIERLKVKPNAKYCITCREIIEKNNKN 118 >UniRef50_A6DCX4 Transcriptional regulator, TraR/DksA family protein n=1 Tax=Caminibacter mediatlanticus TB-2 RepID=A6DCX4_9PROT Length = 116 Score = 95.4 bits (236), Expect = 4e-19, Method: Composition-based stats. Identities = 30/112 (26%), Positives = 57/112 (50%), Gaps = 1/112 (0%) Query: 37 LAHFRRILEAWRNQLRDEVDRTVTHMQDEAA-NFPDPVDRAAQEEEFSLELRNRDRERKL 95 + HF+ IL + +L + + + + + D D AA + + + ++++ Sbjct: 5 IEHFKEILLMRKAELEKILFNISNEIDEISRCDIKDDGDFAAASMDSGRDYQIYLKQKQE 64 Query: 96 IKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAEIREK 147 +K+IE+ LK++E+ +G CE C I RL+ +P A CI C+ + E EK Sbjct: 65 LKEIEEALKRIEEGSYGICEMCDEPIQEERLKIKPYAKYCIICREIIEKEEK 116 >UniRef50_C6C0K2 Transcriptional regulator, TraR/DksA family n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6C0K2_DESAD Length = 116 Score = 95.4 bits (236), Expect = 4e-19, Method: Composition-based stats. Identities = 37/112 (33%), Positives = 57/112 (50%), Gaps = 4/112 (3%) Query: 32 MNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAANFPDPVDRAAQEEEFSLELRNRDR 91 MN +Q R+ LE +L + T + D + A++ E + L R Sbjct: 1 MNSSQRISIRQHLELKLAELIER----TTARDTAVESCADDNEYASRISEQKINLALHVR 56 Query: 92 ERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAE 143 E KLI +E+TL +V++ DFG CE CG EI + R++A PT C+ C++ E Sbjct: 57 ETKLIIDMEETLSRVDNWDFGICEDCGEEIALARIKANPTTRFCVSCQSRME 108 >UniRef50_C9S0U4 Transcriptional regulator, TraR/DksA family n=14 Tax=Bacillaceae RepID=C9S0U4_GEOSY Length = 269 Score = 95.4 bits (236), Expect = 6e-19, Method: Composition-based stats. Identities = 31/127 (24%), Positives = 53/127 (41%), Gaps = 11/127 (8%) Query: 32 MNEAQLAHFRRILEAWRNQLRDEVDRTVT----------HMQDEAANFPDPVDRAAQEEE 81 MN QLA R L + + D + + + + A+ P D A + E Sbjct: 3 MN-EQLAALRSRLLDMKRETEDRLKQNDHFGMIRSHAHDAVGELASYDNHPADEATELYE 61 Query: 82 FSLELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTL 141 +L ++ + +++IE+ L + D +G C CG I RLEA PT C + Sbjct: 62 REKDLALKEHAERELREIERALGAIADGTYGTCRVCGRPIPYERLEALPTTLYCREHSPD 121 Query: 142 AEIREKQ 148 + +K+ Sbjct: 122 QTVSQKR 128 >UniRef50_C6D536 Transcriptional regulator, TraR/DksA family n=2 Tax=Paenibacillus RepID=C6D536_PAESJ Length = 234 Score = 95.0 bits (235), Expect = 6e-19, Method: Composition-based stats. Identities = 32/127 (25%), Positives = 55/127 (43%), Gaps = 9/127 (7%) Query: 33 NEAQLAHFRRILEAWRNQLRDEVDRTVTH-----MQDEAANFP----DPVDRAAQEEEFS 83 N QLA R LEA + ++ + R + ++D P D + E S Sbjct: 3 NATQLAQLRNRLEAEKREIEERQSRNEHNGLASSLRDNTGELSPIDNHPADLGTELFERS 62 Query: 84 LELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAE 143 +L + E + +I + L+ +++ +G C +CG I RLEA P + C++ E Sbjct: 63 KDLALLENEDLHLTRISQALEAMDNGTYGQCRACGKPIPDERLEALPDSLYCVEHAPRQE 122 Query: 144 IREKQMA 150 +Q A Sbjct: 123 TSHRQPA 129 >UniRef50_C6J3C7 DnaK suppressor protein n=2 Tax=Bacillales RepID=C6J3C7_9BACL Length = 245 Score = 94.6 bits (234), Expect = 9e-19, Method: Composition-based stats. Identities = 26/117 (22%), Positives = 51/117 (43%), Gaps = 9/117 (7%) Query: 30 EYMNEAQLAHFRRILEAWRNQLRDEV---------DRTVTHMQDEAANFPDPVDRAAQEE 80 ++ +AQLA L+ ++ L +++ + + + + P D ++ Sbjct: 2 PHLTKAQLAELTAKLQETKSALTEQLSDNDHYGMNESMRDNTNELSQIDNHPGDLGSEVY 61 Query: 81 EFSLELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCID 137 E +L + + ++E L+++ED +GYC +CG I RL A P C D Sbjct: 62 ERGKDLALAEHHELHLARVEDALERIEDGSYGYCATCGKPISYERLRAIPETAYCKD 118 >UniRef50_A2SLK5 Putative DNA-binding protein n=1 Tax=Methylibium petroleiphilum PM1 RepID=A2SLK5_METPP Length = 122 Score = 94.2 bits (233), Expect = 1e-18, Method: Composition-based stats. Identities = 33/117 (28%), Positives = 56/117 (47%), Gaps = 4/117 (3%) Query: 32 MNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAANFPDP----VDRAAQEEEFSLELR 87 MN A R L A +LRDE+ + + AA + + AA + E L++ Sbjct: 1 MNTRPCADLRDDLLAREARLRDELRAHRARLLEPAAATGNTFVAGSEGAAADAEDELDIT 60 Query: 88 NRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAEI 144 ++ + ++ L+++ +G+CE CG IG+ RL A P A C+DC+ A+ Sbjct: 61 LISHWQRELDEVSAALQRLNTGSYGHCERCGEPIGLPRLRALPEARHCLDCQEQADR 117 >UniRef50_C6Q1P6 Transcriptional regulator, TraR/DksA family n=13 Tax=Clostridium RepID=C6Q1P6_9CLOT Length = 201 Score = 94.2 bits (233), Expect = 1e-18, Method: Composition-based stats. Identities = 30/117 (25%), Positives = 53/117 (45%), Gaps = 9/117 (7%) Query: 32 MNEAQLAHFRRILEAWRNQL---------RDEVDRTVTHMQDEAANFPDPVDRAAQEEEF 82 MN +L HFR+ LE + ++ + ++ + + P D A + + Sbjct: 1 MNNERLEHFRKKLELEKKRVYSLLKQMEENETINSNAELATELSFYDNHPSDIATEIFDK 60 Query: 83 SLELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCK 139 + + E +IKKIE +L ++ +G C CG +I RLE P D C++C+ Sbjct: 61 ERGIAFKGNELSIIKKIENSLSNIDKGTYGKCSICGKDIKEERLEFIPYTDHCVECQ 117 >UniRef50_A3ZQT2 Probable DnaK suppressor protein n=1 Tax=Blastopirellula marina DSM 3645 RepID=A3ZQT2_9PLAN Length = 134 Score = 93.9 bits (232), Expect = 1e-18, Method: Composition-based stats. Identities = 30/107 (28%), Positives = 52/107 (48%) Query: 37 LAHFRRILEAWRNQLRDEVDRTVTHMQDEAANFPDPVDRAAQEEEFSLELRNRDRERKLI 96 + + IL R+ LR + ++ +++ D VD A + L + + E + + Sbjct: 9 IDKTKEILLKRRDALRKALAGDLSMLKELEQTAGDVVDFALDSAQDELSSQLAEVESREL 68 Query: 97 KKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAE 143 +I+K L+++ FG CE C +I RL+A P A LCI C+ E Sbjct: 69 AQIDKALERIRGGSFGECEGCTCKIPTARLQALPYATLCIKCQRELE 115 >UniRef50_A0RK79 DnaK suppressor protein n=74 Tax=Bacillus RepID=A0RK79_BACAH Length = 243 Score = 93.9 bits (232), Expect = 1e-18, Method: Composition-based stats. Identities = 28/113 (24%), Positives = 48/113 (42%), Gaps = 8/113 (7%) Query: 32 MNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQ--------DEAANFPDPVDRAAQEEEFS 83 + Q+ F+ +LE + +L + + + ++ P D A + E Sbjct: 2 LTPQQINQFKSVLEKQKQELEQTIQTHENEDRASERESVGELSSYDNHPADMATELYERE 61 Query: 84 LELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCI 136 + + K ++ + L+K+E +G CE G EI RLEA PTA CI Sbjct: 62 KDFGLIELWHKQLEDTKHALQKIEAGTYGICEVSGEEIPFERLEAMPTATTCI 114 >UniRef50_B2KE71 Transcriptional regulator, TraR/DksA family n=1 Tax=Elusimicrobium minutum Pei191 RepID=B2KE71_ELUMP Length = 258 Score = 93.9 bits (232), Expect = 2e-18, Method: Composition-based stats. Identities = 27/112 (24%), Positives = 51/112 (45%), Gaps = 1/112 (0%) Query: 32 MNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAANFPDPVDRAAQEEEFSLELRNRDR 91 + +L ++ L + + +T M+ A DP+D A Q + + D Sbjct: 146 LTAEELKQIKKHLIELHQDATERL-KTKKEMEMPEAEVGDPIDTATQSLDKEILFEQTDN 204 Query: 92 ERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAE 143 I +IE L+K++ +G CE+C + +R++A P A C+ C++ E Sbjct: 205 SHTQIDQIESALRKIDKGIYGKCENCRQLLPKKRIKALPFARYCVVCQSSKE 256 >UniRef50_Q894D3 DnaK suppressor protein n=1 Tax=Clostridium tetani RepID=Q894D3_CLOTE Length = 210 Score = 93.5 bits (231), Expect = 2e-18, Method: Composition-based stats. Identities = 30/119 (25%), Positives = 57/119 (47%), Gaps = 9/119 (7%) Query: 32 MNEAQLAHFRRILEAWRNQLR---------DEVDRTVTHMQDEAANFPDPVDRAAQEEEF 82 M++ +L HF+ L + ++ D ++ Q+ ++ P D A++ + Sbjct: 1 MDKERLQHFKNRLLKEKREVMETIDLMKKADTINSNEEFSQELSSYDNHPSDTASELFDK 60 Query: 83 SLELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTL 141 L + E ++ KIE +L+ +E +G C++CG I RLE P A+ CI+C+ Sbjct: 61 ERGLAFKGNEINILNKIESSLESIEKGQYGNCKNCGKRINEDRLEFIPYAENCIECQKE 119 >UniRef50_D2LWG8 Transcriptional regulator, TraR/DksA family n=1 Tax=Bacillus cellulosilyticus DSM 2522 RepID=D2LWG8_BACS4 Length = 242 Score = 93.5 bits (231), Expect = 2e-18, Method: Composition-based stats. Identities = 26/126 (20%), Positives = 52/126 (41%), Gaps = 9/126 (7%) Query: 32 MNEAQLAHFRRILEAWRNQLRD---------EVDRTVTHMQDEAANFPDPVDRAAQEEEF 82 + Q+ ++ L + + E++ + + + P D+ + E Sbjct: 2 LTNDQINALKKELMQMKEEQLTRLNGQHYGLELELLKESVGELSNYDNHPGDQGTELYER 61 Query: 83 SLELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLA 142 ++ + +L+ +I+ LK +E+ +G CE CG +I RLEA P A CI Sbjct: 62 EKDIALNEHSEQLLDEIDNALKAIEEGSYGKCEVCGTDIPYERLEAIPNARRCIQHAEEK 121 Query: 143 EIREKQ 148 + K+ Sbjct: 122 SVSNKR 127 >UniRef50_D2R5D7 Transcriptional regulator, TraR/DksA family n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2R5D7_9PLAN Length = 150 Score = 93.1 bits (230), Expect = 2e-18, Method: Composition-based stats. Identities = 29/116 (25%), Positives = 56/116 (48%), Gaps = 1/116 (0%) Query: 32 MNEAQ-LAHFRRILEAWRNQLRDEVDRTVTHMQDEAANFPDPVDRAAQEEEFSLELRNRD 90 M + + ++ L A R+ LR + V + + D +D + + + + + Sbjct: 1 MKRNEFIKKMQQRLIARRDALRRTIAGEVQSLYTSESGVVDELDTSLADANAEIGSQMVE 60 Query: 91 RERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAEIRE 146 E + + +I++ ++K+ +G C+SCG I + RL+A P A CI+C E RE Sbjct: 61 VESRELMQIDRAIEKMRAGRYGLCDSCGGPIKLIRLQAVPYAIECIECARRDERRE 116 >UniRef50_Q30V43 Transcriptional regulators, TraR/DksA family n=1 Tax=Desulfovibrio desulfuricans subsp. desulfuricans str. G20 RepID=Q30V43_DESDG Length = 149 Score = 93.1 bits (230), Expect = 3e-18, Method: Composition-based stats. Identities = 35/118 (29%), Positives = 52/118 (44%), Gaps = 1/118 (0%) Query: 28 GEEYMNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAANFPDPVDRAAQEEEFSLELR 87 G MN+ QL L L+ + PD ++A++ E +L++ Sbjct: 20 GVMVMNDQQLGTIADSLRDRVVFLKQQCG-LAPETAAAVIACPDENEQASRLAELTLDVA 78 Query: 88 NRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAEIR 145 R R + + +E L ++ FG CE CG EIG RL+A PT LCI C+ E Sbjct: 79 LRGRLARQLAAVESALHRIATGGFGRCEECGDEIGEARLKANPTTTLCIHCQEDREAE 136 >UniRef50_A6Q9W6 DnaK suppressor protein DksA n=1 Tax=Sulfurovum sp. NBC37-1 RepID=A6Q9W6_SULNB Length = 118 Score = 92.7 bits (229), Expect = 3e-18, Method: Composition-based stats. Identities = 30/117 (25%), Positives = 57/117 (48%), Gaps = 1/117 (0%) Query: 32 MNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQ-DEAANFPDPVDRAAQEEEFSLELRNRD 90 + + +L F L R Q+ ++ T ++ + D D AA E +++ + Sbjct: 2 LTQEELKEFENKLLDRRVQIEKNLNGTALELEGMRNLDLNDEGDYAAASAETAVDSAILE 61 Query: 91 RERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAEIREK 147 ++RK + +I+ L K+++ +G CE C IG RLE + A CI C+ + E ++ Sbjct: 62 QQRKELAEIDLALDKIKNGTYGICEMCEEPIGKARLEVKNFARFCITCREINEKEQQ 118 >UniRef50_Q3ABZ5 Putative transcriptional regulator n=1 Tax=Carboxydothermus hydrogenoformans Z-2901 RepID=Q3ABZ5_CARHZ Length = 213 Score = 92.7 bits (229), Expect = 3e-18, Method: Composition-based stats. Identities = 24/118 (20%), Positives = 49/118 (41%), Gaps = 8/118 (6%) Query: 36 QLAHFRRILEAWRNQLRDEVDRT--------VTHMQDEAANFPDPVDRAAQEEEFSLELR 87 +A F+++L + + + Q+ + P D ++ E S + Sbjct: 2 DIAIFKKMLLKLKEEYEKRLLELKKSEENPFFESTQELSFYDNHPGDLGSESFERSKDFA 61 Query: 88 NRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAEIR 145 D + +++I++ + + +G C CG +I + RL A P A C+ C+ E R Sbjct: 62 LIDNLKLKLRQIDEAIALINQGKYGLCIDCGQKIPVDRLFANPVAIRCVACQKRVEER 119 >UniRef50_Q72G22 C4-type zinc finger protein, DksA/TraR family n=3 Tax=Desulfovibrio vulgaris RepID=Q72G22_DESVH Length = 176 Score = 92.7 bits (229), Expect = 3e-18, Method: Composition-based stats. Identities = 31/123 (25%), Positives = 53/123 (43%), Gaps = 6/123 (4%) Query: 21 EPYQEKPGEEYMNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAANFPDPVDRAAQEE 80 P + M + Q + R L+ + LR + D + A++ Sbjct: 44 HPLSATNEDTAMTDRQRSDIRDHLQRELDSLR------RAAIMGGYEPCADENEFASRLA 97 Query: 81 EFSLELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKT 140 E +L + R I +E L+++E D+G CE CG +I + RL+A P LC+ C+ Sbjct: 98 EMALSVTLLHRAEHRIGLLENALRRLEAYDYGVCEGCGEDIPVARLKASPATRLCVFCQQ 157 Query: 141 LAE 143 +E Sbjct: 158 ESE 160 >UniRef50_A8MH72 Transcriptional regulator, TraR/DksA family n=1 Tax=Alkaliphilus oremlandii OhILAs RepID=A8MH72_ALKOO Length = 226 Score = 92.7 bits (229), Expect = 3e-18, Method: Composition-based stats. Identities = 25/121 (20%), Positives = 54/121 (44%), Gaps = 10/121 (8%) Query: 32 MNEAQLAHFRRILEAWRNQLRDEVDRTVTHM----------QDEAANFPDPVDRAAQEEE 81 M + +L +FR L + Q+ ++ +H ++ ++ P D ++ Sbjct: 1 MEKKKLEYFRGKLLKEKKQVMKTIELMKSHYPTDASMKEYTEELSSYDNHPADLGSEMFM 60 Query: 82 FSLELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTL 141 ++ + E+ + +I+ ++K+ + +G C+ CG +I RLE P + CIDC Sbjct: 61 MEMQNNLENHEKNRLLEIDDAVQKINEGTYGNCQICGNKILEERLEIMPASITCIDCAEK 120 Query: 142 A 142 Sbjct: 121 E 121 >UniRef50_C8WW56 Transcriptional regulator, TraR/DksA family n=2 Tax=Alicyclobacillus acidocaldarius RepID=C8WW56_ALIAD Length = 213 Score = 92.3 bits (228), Expect = 4e-18, Method: Composition-based stats. Identities = 34/121 (28%), Positives = 52/121 (42%), Gaps = 10/121 (8%) Query: 36 QLAHFRRILEAWRNQLRDEVDRTVT----------HMQDEAANFPDPVDRAAQEEEFSLE 85 R LEA R +L D ++ T + A P D A++ + Sbjct: 2 DTDSIRSRLEAARERLIDRLNGAETSADIRSAMPDEFSELAMYDNHPADVASELALRNQA 61 Query: 86 LRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAEIR 145 + R R+ + + +E L ++ +G CESCG I RLEA PT C+DC+ E R Sbjct: 62 VGERLRDERALADVEDALSRIRQGTYGQCESCGRPIPPDRLEAIPTTRRCVDCEREVEAR 121 Query: 146 E 146 + Sbjct: 122 Q 122 >UniRef50_A6TRY0 Transcriptional regulator, TraR/DksA family n=1 Tax=Alkaliphilus metalliredigens QYMF RepID=A6TRY0_ALKMQ Length = 224 Score = 92.3 bits (228), Expect = 4e-18, Method: Composition-based stats. Identities = 28/117 (23%), Positives = 56/117 (47%), Gaps = 10/117 (8%) Query: 32 MNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDE----------AANFPDPVDRAAQEEE 81 M+ + +F+R L +N + + R + D+ +A P D ++ Sbjct: 1 MDPKKQGYFKRRLHEEKNNALETLTRMEANQGDDESMRENTGELSAYDNHPADLGSEMFM 60 Query: 82 FSLELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDC 138 S++ + ER + +I++ L+K+++ +G C+ CG I RLE P A++C+ C Sbjct: 61 MSMQANLENHERYRVTEIDRALEKIQEGTYGECQLCGQGIPDERLEVMPEANICMVC 117 >UniRef50_C1F3S7 Putative RNA polymerase-binding protein DksA n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F3S7_ACIC5 Length = 139 Score = 92.3 bits (228), Expect = 4e-18, Method: Composition-based stats. Identities = 30/108 (27%), Positives = 47/108 (43%), Gaps = 1/108 (0%) Query: 37 LAHFRRILEAWRNQLRDEVDRTVTHMQD-EAANFPDPVDRAAQEEEFSLELRNRDRERKL 95 ++ L + +L V TV ++ E N DP D+A + L + Sbjct: 21 RKTLQQKLVEQKTELERSVLATVRQGREPEMENRIDPADQAVMSYQQELIFSQGTNKHTQ 80 Query: 96 IKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAE 143 + + L+++ED +G C CG +I RRLEA P CI C+ E Sbjct: 81 LSLVRLALERLEDGSYGECAECGEDISPRRLEAVPWTPYCISCQEKVE 128 >UniRef50_Q7VGT4 DnaK suppressor protein DskA n=2 Tax=Helicobacter RepID=Q7VGT4_HELHP Length = 118 Score = 92.3 bits (228), Expect = 5e-18, Method: Composition-based stats. Identities = 35/114 (30%), Positives = 58/114 (50%), Gaps = 1/114 (0%) Query: 36 QLAHFRRILEAWRNQLRDEVDRTVTHMQD-EAANFPDPVDRAAQEEEFSLELRNRDRERK 94 F +L ++L D +D T +++ + A+ D D + +LE+ D + Sbjct: 3 DYTFFEILLNERLSKLCDNIDSKNTRIKNIQDAHHKDEGDIVGAGLQGNLEMGMIDLYKD 62 Query: 95 LIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAEIREKQ 148 IK I L+K++D FG CE C EI + RL+ +P A CI+C+ L E +K+ Sbjct: 63 EIKDIRNALQKIKDGTFGVCEMCDDEIDVERLKVKPHAKYCINCRELFEQTQKK 116 >UniRef50_Q73KX9 C4 zinc finger domain protein, DksA/TraR family n=1 Tax=Treponema denticola RepID=Q73KX9_TREDE Length = 119 Score = 91.9 bits (227), Expect = 5e-18, Method: Composition-based stats. Identities = 25/116 (21%), Positives = 51/116 (43%), Gaps = 2/116 (1%) Query: 32 MNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAANF--PDPVDRAAQEEEFSLELRNR 89 M + + + L R ++ + + + AN D D A+ + + Sbjct: 1 MKKKFIEEMKEYLLKEREEILASLQKNDEEYAETLANSIPKDFADLASYSTDRDMLEFIG 60 Query: 90 DRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAEIR 145 + K ++KI+ L+++ + +G C +C +I RL+A P A CI C+ +E + Sbjct: 61 ENNVKKLQKIDSALERIREGKYGKCITCKEQIPEDRLKALPYALKCIHCQAKSEKK 116 >UniRef50_D1C120 Transcriptional regulator, TraR/DksA family n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C120_SPHTD Length = 130 Score = 91.9 bits (227), Expect = 5e-18, Method: Composition-based stats. Identities = 35/125 (28%), Positives = 52/125 (41%), Gaps = 8/125 (6%) Query: 30 EYMNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAANFPDP--------VDRAAQEEE 81 M + QL R L+ + E+ ++ A D D+A E Sbjct: 1 MVMTDEQLEAIRARLQQALAETTAEISEIDEQVRSFGAGEQDASYGVDNHIGDQADVVYE 60 Query: 82 FSLELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTL 141 L RDR IE+ + K++ ++GYCE+C I RLEA P A CIDC+ Sbjct: 61 QERLLSVRDRLADRKVLIERAITKMDQGEYGYCENCKRPIPPDRLEALPFARYCIDCQAD 120 Query: 142 AEIRE 146 + R+ Sbjct: 121 MDRRQ 125 >UniRef50_C9R7U4 Transcriptional regulator, TraR/DksA family n=1 Tax=Ammonifex degensii KC4 RepID=C9R7U4_AMMDK Length = 176 Score = 91.6 bits (226), Expect = 7e-18, Method: Composition-based stats. Identities = 29/99 (29%), Positives = 47/99 (47%) Query: 47 WRNQLRDEVDRTVTHMQDEAANFPDPVDRAAQEEEFSLELRNRDRERKLIKKIEKTLKKV 106 + R+E + + + P D ++ E + +L R+ ++ IE L+++ Sbjct: 1 MEERTRNERLPLREAIGELSLADNHPADVGSELFERAKDLALREDALLKLQVIEDALRRL 60 Query: 107 EDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAEIR 145 E+ +GYCESCG I RLEA P LC CK E + Sbjct: 61 EEGTYGYCESCGAPIPRERLEAVPYTTLCHACKERQEAK 99 >UniRef50_B9XR79 Transcriptional regulator, TraR/DksA family n=1 Tax=bacterium Ellin514 RepID=B9XR79_9BACT Length = 192 Score = 91.6 bits (226), Expect = 8e-18, Method: Composition-based stats. Identities = 31/141 (21%), Positives = 54/141 (38%), Gaps = 1/141 (0%) Query: 6 NRKTSSLSILAIAGVEPYQEKPGEEYMNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDE 65 ++ S + +I G+ + K E + + A + + L R QL ++ E Sbjct: 15 SKSVRSATAASILGLPSEKAKKNGEAKIKPEWAGYYQNLLELREQLLKQMSGLAKESAQE 74 Query: 66 AANFP-DPVDRAAQEEEFSLELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIR 124 A + D + L ++ I +IE+ LK++E +G CE G I Sbjct: 75 LAGYSLHMADSGTDNFDRDFALSLLSSDQDAIYEIEEALKRIEKNTYGVCELTGKPIPKA 134 Query: 125 RLEARPTADLCIDCKTLAEIR 145 RLEA P + + E Sbjct: 135 RLEAIPWTRFTVQAQAQLEKE 155 >UniRef50_B2S244 Possible dnaK suppressor n=3 Tax=Treponema RepID=B2S244_TREPS Length = 120 Score = 91.2 bits (225), Expect = 1e-17, Method: Composition-based stats. Identities = 25/120 (20%), Positives = 52/120 (43%), Gaps = 2/120 (1%) Query: 32 MNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAANFP--DPVDRAAQEEEFSLELRNR 89 M+++ + + L + L + Q A D D A+ + + + Sbjct: 1 MDQSFVEEMKVSLVERKRSLARSLTTNNEDFQAIVAGVDPKDSADIASDDMDRKMLESLS 60 Query: 90 DRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAEIREKQM 149 ++ + +++IE L ++E +G C CG I RL A P + +CI+C++ E + + Sbjct: 61 AKDLRCLQQIESALLRIEQGRYGKCADCGESIPEDRLRAIPYSLMCIECQSARESKRRAF 120 >UniRef50_A0LGY5 Transcriptional regulator, TraR/DksA family n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LGY5_SYNFM Length = 257 Score = 91.2 bits (225), Expect = 1e-17, Method: Composition-based stats. Identities = 36/116 (31%), Positives = 61/116 (52%), Gaps = 5/116 (4%) Query: 32 MNEAQLAHFRRILEAWRNQLRDEVDR--TVTHMQDEAANFPDPVDRAAQEEEFSLELRNR 89 M++ + + R +L R ++ D V+R V + A + +A+ E + NR Sbjct: 1 MDKRDILYLRNMLIVRRKEISDRVNRLAAVWKGVEPAIELEEEAQKASITEPYQRLDANR 60 Query: 90 DRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAEIR 145 +K +++I+ L K+ ++G CESCG +I ++RLEA P A LC+DC E R Sbjct: 61 ---KKEVEQIDLALGKIAIGEYGICESCGDDIALKRLEAIPWARLCVDCARDFEQR 113 >UniRef50_Q48NH0 RNA polymerase-binding protein DksA n=2 Tax=Pseudomonas syringae group RepID=Q48NH0_PSE14 Length = 138 Score = 90.8 bits (224), Expect = 1e-17, Method: Composition-based stats. Identities = 34/135 (25%), Positives = 62/135 (45%), Gaps = 2/135 (1%) Query: 15 LAIAGVEPYQEKPGEEYMNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAANFPDPVD 74 +A+ V+ + +EYM+ QL F+ LE +LRD + + E PD D Sbjct: 1 MALMSVDQLLNQAEDEYMSVDQLVFFKDRLEVKAAELRDRL--LSCQVSCEIERHPDEAD 58 Query: 75 RAAQEEEFSLELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADL 134 A+ EE ++ +R+R+ + + K L+ + D+G+ + G IGI+RL P + Sbjct: 59 FASDEENRAVAASMIERDRQTLSHVLKALEILALGDYGFFQETGEAIGIKRLLLVPESLY 118 Query: 135 CIDCKTLAEIREKQM 149 ++ E + Sbjct: 119 SVESMRALEAKGMHQ 133 >UniRef50_C7LTL7 Transcriptional regulator, TraR/DksA family n=1 Tax=Desulfomicrobium baculatum DSM 4028 RepID=C7LTL7_DESBD Length = 133 Score = 90.8 bits (224), Expect = 1e-17, Method: Composition-based stats. Identities = 29/102 (28%), Positives = 47/102 (46%) Query: 43 ILEAWRNQLRDEVDRTVTHMQDEAANFPDPVDRAAQEEEFSLELRNRDRERKLIKKIEKT 102 L ++ +E + M PD D+A + +R KL+K I Sbjct: 14 QLREKFRKIEEENESLRDVMSQNRELEPDLADQACSASSRDWNVIRYNRNVKLLKDITVA 73 Query: 103 LKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAEI 144 LK ++++ +G CE CG I RRL A P+A CI+C+ + + Sbjct: 74 LKAIDNDSYGICEMCGEHIADRRLLAIPSALFCIECQEMIDR 115 >UniRef50_D1CBT8 Transcriptional regulator, TraR/DksA family n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=D1CBT8_THET1 Length = 126 Score = 90.8 bits (224), Expect = 1e-17, Method: Composition-based stats. Identities = 30/123 (24%), Positives = 52/123 (42%), Gaps = 8/123 (6%) Query: 30 EYMNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAANFPDP--------VDRAAQEEE 81 + + Q++ R+ LE R +L E+ + + D D E Sbjct: 1 MAIRDQQISELRKRLEDERARLVSELRDLQSDASQWGESVRDEDSSYGNHMADEGTDTFE 60 Query: 82 FSLELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTL 141 E+ + R ++ +IE LK++++ +G C CG EI I RL ARP A C+ + Sbjct: 61 QEKEIALQRNLRSVLNEIEAALKRMDEGTYGICIDCGQEIPIERLMARPYAVRCVADQEK 120 Query: 142 AEI 144 + Sbjct: 121 YDR 123 >UniRef50_Q021L0 Transcriptional regulator, TraR/DksA family n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q021L0_SOLUE Length = 129 Score = 90.4 bits (223), Expect = 1e-17, Method: Composition-based stats. Identities = 27/113 (23%), Positives = 53/113 (46%), Gaps = 3/113 (2%) Query: 32 MNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAANFPDPVDRAAQEEEFSLELRNRDR 91 M+ QL F+RI+E + + + PD +D+ +L +R + Sbjct: 1 MDNIQLKEFKRIIEEHLASFEHPLGHREDIV---VESTPDTLDQVQNAAARALAIRQLEL 57 Query: 92 ERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAEI 144 + K ++ + L+++ED +G C+ C +I ++RL P A C+ C+ A+ Sbjct: 58 DHKRMRGLRDALERIEDGSYGICQRCDEDISLKRLRVVPWASYCLRCQESADH 110 >UniRef50_A1K6D2 Conserved hypothetical DnaK suppressor protein n=2 Tax=Betaproteobacteria RepID=A1K6D2_AZOSB Length = 135 Score = 90.4 bits (223), Expect = 2e-17, Method: Composition-based stats. Identities = 30/120 (25%), Positives = 55/120 (45%), Gaps = 5/120 (4%) Query: 30 EYMNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQD-----EAANFPDPVDRAAQEEEFSL 84 ++N+ ++A +L+ L+ V V+ + + D D+A Sbjct: 2 NHLNDDEIAALGALLDERERALKSGVHEHVSRLLEGGQPGLTTPAGDAADQAEVGLTREH 61 Query: 85 ELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAEI 144 E R+ + ++ IE +++ + + G C CG EI RLEA+PTA C+ C++L E Sbjct: 62 ENLAVVRDVRELRDIEAARERIAEGEAGICVDCGEEIPFARLEAQPTATRCVRCQSLYER 121 >UniRef50_P42408 Uncharacterized protein yteA n=2 Tax=Bacillus subtilis group RepID=YTEA_BACSU Length = 239 Score = 90.0 bits (222), Expect = 2e-17, Method: Composition-based stats. Identities = 30/112 (26%), Positives = 49/112 (43%), Gaps = 10/112 (8%) Query: 32 MNEAQLAHFRRILEAWRNQLRDEVDRTVT----------HMQDEAANFPDPVDRAAQEEE 81 + + QL H + LE + + + + +A P D+A + E Sbjct: 2 LTKEQLQHLKNELEQTKKDILNRFKDNDHFQLNSAFPYDSWGELSAYDNHPGDQATELYE 61 Query: 82 FSLELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTAD 133 ++ ER+ ++ IE +LK +E+ +G CE G EI RLEA PTA Sbjct: 62 REKDIALDLHEREHLRDIEHSLKAIENGTYGICEVSGKEIPFERLEALPTAT 113 >UniRef50_O66611 Uncharacterized protein aq_250 n=3 Tax=Aquificaceae RepID=Y250_AQUAE Length = 145 Score = 89.6 bits (221), Expect = 3e-17, Method: Composition-based stats. Identities = 29/117 (24%), Positives = 48/117 (41%), Gaps = 3/117 (2%) Query: 32 MNEAQLAHFRRILEAWRNQLRD---EVDRTVTHMQDEAANFPDPVDRAAQEEEFSLELRN 88 MN+ L ++ L + ++ + E + T + +E+ D D L Sbjct: 1 MNKELLEKCKQKLLEEKAKILERYLEKEETQQRLGEESKEPRDWEDIGQMTYTEELLDNL 60 Query: 89 RDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAEIR 145 + E +++I+ L+K+E +G CE CG EI RL A P C C E Sbjct: 61 SNVEIATLREIDYALEKIEKGTYGICERCGEEIPEPRLCAIPWTRYCAKCAEEVERE 117 >UniRef50_A0LMB8 Transcriptional regulator, TraR/DksA family n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LMB8_SYNFM Length = 122 Score = 89.6 bits (221), Expect = 3e-17, Method: Composition-based stats. Identities = 34/118 (28%), Positives = 55/118 (46%), Gaps = 2/118 (1%) Query: 32 MNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAANFP--DPVDRAAQEEEFSLELRNR 89 M++ +F IL ++ + + M D VDR + E L Sbjct: 1 MDKELSVYFHDILIKRLMEVFPAMRGRLLKMAGMGTVHDPMDEVDRTSIRTEQEFLLHMH 60 Query: 90 DRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAEIREK 147 R +L+++I L+++ DFG CE CG +I + RL+A P+A CI CK AE + + Sbjct: 61 CRNERLVQEILNGLQRIRTGDFGVCEECGKDIELNRLKAHPSATQCIKCKKAAERKAR 118 >UniRef50_A5UPY9 Transcriptional regulator, TraR/DksA family n=2 Tax=Roseiflexus RepID=A5UPY9_ROSS1 Length = 121 Score = 89.6 bits (221), Expect = 3e-17, Method: Composition-based stats. Identities = 30/110 (27%), Positives = 50/110 (45%), Gaps = 3/110 (2%) Query: 41 RRILEAWRNQLRDEVDRTVTHMQDEAANFPDPVDRAAQEEE---FSLELRNRDRERKLIK 97 R LEA R+ L E+ + A + E +L R R+L++ Sbjct: 11 RERLEAERDALLAEIAALERERASREESAGIGNVVAEEMMETLVRERDLALRSNARELLE 70 Query: 98 KIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAEIREK 147 ++ L+++++ +G C CG I I RLEA P A LC+ C++ E + Sbjct: 71 QVNAALRRLDEGTYGICADCGEPIPIERLEALPYATLCVRCQSTRERARR 120 >UniRef50_B0SIE7 DnaK suppressor protein n=6 Tax=Leptospira RepID=B0SIE7_LEPBA Length = 154 Score = 89.2 bits (220), Expect = 4e-17, Method: Composition-based stats. Identities = 25/133 (18%), Positives = 57/133 (42%), Gaps = 1/133 (0%) Query: 20 VEPYQEKPGEEYMNEAQLAHFRRILEAWRNQLRDEVDRTV-THMQDEAANFPDPVDRAAQ 78 +P + E+ +++ + R +L+ + L ++++ T D D A++ Sbjct: 2 PKPAAKSSAEKGVDKKFIEEVRELLQEKKESLLIKLNQWEDTSSPSGLKEMGDIADIASE 61 Query: 79 EEEFSLELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDC 138 +L + E + +++IE L+K+E+ +G CE +I + RL+A P ++ Sbjct: 62 LNSEALTSVLTENEIETLREIELALEKIENGTYGICEGTKKKIPLARLKAIPWTRFTVEF 121 Query: 139 KTLAEIREKQMAG 151 + G Sbjct: 122 AEQMAKSRNRAGG 134 >UniRef50_D1C5L2 Transcriptional regulator, TraR/DksA family n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C5L2_SPHTD Length = 132 Score = 89.2 bits (220), Expect = 4e-17, Method: Composition-based stats. Identities = 31/119 (26%), Positives = 48/119 (40%), Gaps = 2/119 (1%) Query: 29 EEYMNEAQ--LAHFRRILEAWRNQLRDEVDRTVTHMQDEAANFPDPVDRAAQEEEFSLEL 86 E M A+ L R L R ++ + + DE D A+ E + Sbjct: 11 REVMTTARGRLMRLREDLLRHRAEVEESLAAMTVSQGDEGTIATHIADAASDLLEAQTTV 70 Query: 87 RNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAEIR 145 R + +++ L ++E +G C CG I RL+A PTA C+ C+T E R Sbjct: 71 GALARIDAELAEVDAALDRLERGTYGVCIDCGEMIDPARLKALPTATRCLRCQTHFEYR 129 >UniRef50_C9RQK2 Transcriptional regulator, TraR/DksA family n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RQK2_FIBSS Length = 157 Score = 88.9 bits (219), Expect = 4e-17, Method: Composition-based stats. Identities = 33/122 (27%), Positives = 55/122 (45%), Gaps = 7/122 (5%) Query: 32 MNEAQLAHFRRILEAWRNQLRDEVDRTVT-----HMQDEAANFPDP--VDRAAQEEEFSL 84 M++A L F +L R +L + ++++ + D D A Sbjct: 9 MSDADLKFFEEMLLEKRRELVTAQSDSEKANVFLDQKNQSGDGGDSEGADSATDINSLET 68 Query: 85 ELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAEI 144 L RE K + +E+ LK++++ FG C+ CG I RL A PTA C++CK + Sbjct: 69 NLSLAAREGKYLVYLEEALKRIKNGTFGVCKICGQLIPKARLMAVPTATKCVNCKEETKK 128 Query: 145 RE 146 +E Sbjct: 129 KE 130 >UniRef50_A4BMT6 Putative uncharacterized protein n=1 Tax=Nitrococcus mobilis Nb-231 RepID=A4BMT6_9GAMM Length = 132 Score = 88.9 bits (219), Expect = 4e-17, Method: Composition-based stats. Identities = 35/122 (28%), Positives = 50/122 (40%), Gaps = 5/122 (4%) Query: 30 EYMNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDE-----AANFPDPVDRAAQEEEFSL 84 E + Q +R LE L V + A PD D + + L Sbjct: 3 ESLTPEQRRELQRRLEEDYKALCANVREELLSSDQNSYAVLADKVPDVGDASVADLLVDL 62 Query: 85 ELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAEI 144 + DR + I++IE L+K+ D +GYC CG I +RL+A P C C+T E Sbjct: 63 NIAEIDRHVREIQRIEAALRKLADGSYGYCMDCGEAIAAQRLQANPAVARCYACQTRFEQ 122 Query: 145 RE 146 E Sbjct: 123 EE 124 >UniRef50_Q2B4E3 Putative uncharacterized protein n=4 Tax=Bacillus RepID=Q2B4E3_9BACI Length = 252 Score = 88.9 bits (219), Expect = 4e-17, Method: Composition-based stats. Identities = 26/115 (22%), Positives = 49/115 (42%), Gaps = 10/115 (8%) Query: 33 NEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAA----------NFPDPVDRAAQEEEF 82 + Q+ + +LE + + +++D D + P D + E Sbjct: 3 TKDQINDLKSMLEEDKKTIEEQLDSDTNSRFDNESARDTVGELSMYDNHPGDAGTELFER 62 Query: 83 SLELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCID 137 + + + + + K+ K L+ +ED +G C CG ++ RLEA PTA C+D Sbjct: 63 EKDQAIEEHQNEELDKVNKALQAIEDGTYGKCRECGKDLPFERLEAVPTALYCVD 117 >UniRef50_A4XKS6 Transcriptional regulator, TraR/DksA family n=2 Tax=Clostridia RepID=A4XKS6_CALS8 Length = 209 Score = 88.9 bits (219), Expect = 5e-17, Method: Composition-based stats. Identities = 33/101 (32%), Positives = 52/101 (51%), Gaps = 1/101 (0%) Query: 47 WRNQLRDEVDRTVTHMQDEAANFPD-PVDRAAQEEEFSLELRNRDRERKLIKKIEKTLKK 105 +N ++V T +E +N+ + P D A+ E + + ++ ++ IEK L K Sbjct: 24 LKNTKENQVASFSTLYSNEVSNYDNHPADIASDLFEVEKNMGLKADMKRKLELIEKALSK 83 Query: 106 VEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAEIRE 146 +E +FGYC SC EI RL A P + CI+C+ E RE Sbjct: 84 IEKGNFGYCISCKKEIPFDRLLAIPYTEFCIECQKDMEKRE 124 >UniRef50_Q2GEN7 DnaK suppressor protein n=2 Tax=Neorickettsia RepID=Q2GEN7_NEOSM Length = 137 Score = 88.9 bits (219), Expect = 5e-17, Method: Composition-based stats. Identities = 33/118 (27%), Positives = 58/118 (49%), Gaps = 11/118 (9%) Query: 30 EYMNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAANFPDPVDRAAQEEEFSLELRNR 89 EYM E LA+F L RN + ++ + V + + AN + D ++ + Sbjct: 18 EYMGERMLAYFHEKLIGLRNAIVNQ-GKVVKDVLSKCANSYEADDIIMSAQKRN------ 70 Query: 90 DRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAEIREK 147 L+ +I++ L+++E +GYCE G EIG RL+ PTA C+D + + + + Sbjct: 71 ----SLLSEIDEALERMEQGVYGYCEETGDEIGFGRLDLEPTARYCVDVQERLDKKNR 124 >UniRef50_A9B2U1 Transcriptional regulator, TraR/DksA family n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9B2U1_HERA2 Length = 117 Score = 88.9 bits (219), Expect = 5e-17, Method: Composition-based stats. Identities = 30/112 (26%), Positives = 49/112 (43%), Gaps = 5/112 (4%) Query: 32 MNEAQLAHFRRILEAWRNQLRDEVDRTVT-----HMQDEAANFPDPVDRAAQEEEFSLEL 86 +++AQL +F+ L N L +EV R + E D A+ E Sbjct: 3 LSKAQLGYFKERLHDMHNHLNEEVQRLEEATNQLNQDAEFGVSNHIADDASDIFEREKNF 62 Query: 87 RNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDC 138 + ++LI ++E L +++ +G C G +I I RLE P A L I+ Sbjct: 63 ALIEDRQRLIGEVEAALDRIDHGTYGICLKTGKQIPIERLEVLPYAALSIEA 114 >UniRef50_D1YA14 C4-type zinc finger protein, DksA/TraR family n=3 Tax=Propionibacterium acnes RepID=D1YA14_PROAC Length = 159 Score = 88.5 bits (218), Expect = 6e-17, Method: Composition-based stats. Identities = 32/143 (22%), Positives = 60/143 (41%), Gaps = 6/143 (4%) Query: 9 TSSLSILAIAGVEPYQE-KPGEEYMNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQD--- 64 SS+S + + + G+E +++ LE+ ++ + + + D Sbjct: 17 ESSMSDHDVEAIAASLPVRDGDEPWTADEISEIVGTLESDVQRMGTALTKAENDLADLMK 76 Query: 65 --EAANFPDPVDRAAQEEEFSLELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIG 122 D +D + + E E+ R + + + L+ ++ +G CESCG IG Sbjct: 77 QGNDGAGMDTIDVGSSQFERDQEISVTRNARAVYDQSKLALQLLDRGTWGTCESCGEPIG 136 Query: 123 IRRLEARPTADLCIDCKTLAEIR 145 RL+A P A +C+ CK E R Sbjct: 137 KARLQAFPRATMCVKCKQRQERR 159 >UniRef50_Q7UR73 Probable DnaK suppressor protein n=1 Tax=Rhodopirellula baltica RepID=Q7UR73_RHOBA Length = 140 Score = 88.5 bits (218), Expect = 6e-17, Method: Composition-based stats. Identities = 33/114 (28%), Positives = 55/114 (48%), Gaps = 1/114 (0%) Query: 33 NEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDE-AANFPDPVDRAAQEEEFSLELRNRDR 91 + L R L R+ LR ++ ++ +Q+ D +D AA + L + + Sbjct: 3 RDDTLKTLRITLLRRRDALRKALEGDLSLLQELHNQKTGDALDAAADTVQDELNSQLVEV 62 Query: 92 ERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAEIR 145 E + + IE+ + + E+ FG CE CG I + RL+A P A CI+C+ AE Sbjct: 63 ESRELLAIEEAIARFEEGRFGDCEDCGKPIPLNRLKAIPYAVDCINCRRAAERE 116 >UniRef50_C1ZKC1 DnaK suppressor protein n=1 Tax=Planctomyces limnophilus DSM 3776 RepID=C1ZKC1_PLALI Length = 152 Score = 88.1 bits (217), Expect = 7e-17, Method: Composition-based stats. Identities = 25/107 (23%), Positives = 48/107 (44%) Query: 37 LAHFRRILEAWRNQLRDEVDRTVTHMQDEAANFPDPVDRAAQEEEFSLELRNRDRERKLI 96 +A ++ L R LR ++ + D + AA E+ L + E + + Sbjct: 7 VAKIKKHLLLQREDLRSKIAEEMGLAYSPDDGINDLGETAALVEQSELHTQLAALETREL 66 Query: 97 KKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAE 143 +I + L +E+ +G C+ C I + RL+A P +C++C+ E Sbjct: 67 MQINRALALIEEGHYGVCQKCSKAIPLARLQAVPFTTVCVECQRRQE 113 >UniRef50_D1UB56 Transcriptional regulator, TraR/DksA family n=1 Tax=Desulfovibrio aespoeensis Aspo-2 RepID=D1UB56_9DELT Length = 116 Score = 88.1 bits (217), Expect = 8e-17, Method: Composition-based stats. Identities = 37/117 (31%), Positives = 56/117 (47%), Gaps = 8/117 (6%) Query: 32 MNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDE--AANFPDPVDRAAQEEEFSLELRNR 89 M E Q + L + L TV + N PD D A Q + + L + Sbjct: 1 MTETQRREIKDHLLNGLSSL------TVQEAAETFAVENCPDETDFATQLAQQGVNLAMQ 54 Query: 90 DRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAEIRE 146 R IK+ E +K++ + D+G C+ CG IG+ RL+A P+A LCI C++ AE + Sbjct: 55 RRRMARIKEYECAIKRLRETDYGTCDECGDPIGLARLKANPSARLCIVCQSAAEEED 111 >UniRef50_Q221D7 Transcriptional regulators, TraR/DksA family n=3 Tax=Comamonadaceae RepID=Q221D7_RHOFD Length = 124 Score = 88.1 bits (217), Expect = 9e-17, Method: Composition-based stats. Identities = 34/124 (27%), Positives = 54/124 (43%), Gaps = 5/124 (4%) Query: 32 MNEAQLAHFRRILEAWRNQLRDEVDR----TVTHMQDEAANFPDPVD-RAAQEEEFSLEL 86 M + F+ L A R L ++ TV + A +F D A + LE Sbjct: 1 MTQKLNTTFKEQLLAQRASLLAQLSDLRGGTVGRAEASAEHFGQKEDSTAQESSARELEF 60 Query: 87 RNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAEIRE 146 R+ + + +++ L+++ED +G C CGV I RL A P A CI C+ E + Sbjct: 61 ALDARDSEELDRLDAALRRIEDGSYGLCVDCGVGIPAARLHAAPDALRCIACQEKLEKAQ 120 Query: 147 KQMA 150 + A Sbjct: 121 ARQA 124 >UniRef50_Q1Q506 Similar to DnaK suppressor protein n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1Q506_9BACT Length = 140 Score = 87.7 bits (216), Expect = 1e-16, Method: Composition-based stats. Identities = 28/119 (23%), Positives = 55/119 (46%), Gaps = 9/119 (7%) Query: 34 EAQLAHFRRILEAWRNQL--------RDEVDRTVTHMQDEAANFP-DPVDRAAQEEEFSL 84 + + A +R++L + R +L + + ++ + +N P D E L Sbjct: 18 KDEYAPYRKLLLSLREKLVGKVDYMQEETLKKSRQDASGDLSNVPIHMADVGTDNYEREL 77 Query: 85 ELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAE 143 + ++ I+ L+++E+ FG CE+C +I RL+A P A LC++C+ E Sbjct: 78 MIELMQSGEDSVRSIDDALERIEEGTFGICEACEKKINRERLKAVPYASLCVNCQREEE 136 >UniRef50_C5RLG0 Transcriptional regulator, TraR/DksA family n=1 Tax=Clostridium cellulovorans 743B RepID=C5RLG0_CLOCL Length = 199 Score = 87.7 bits (216), Expect = 1e-16, Method: Composition-based stats. Identities = 27/117 (23%), Positives = 49/117 (41%), Gaps = 9/117 (7%) Query: 32 MNEAQLAHFRRILEAWRNQLR---------DEVDRTVTHMQDEAANFPDPVDRAAQEEEF 82 +NE + +F+ L R ++ + +D + + + P D A + E Sbjct: 2 LNEDEKKYFKNKLLTERERINKLLMEMKDNETIDSNLNATAELSFYDNHPSDSATELSEI 61 Query: 83 SLELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCK 139 + E ++ KI + L +E+ D+G C +C EI RL+ P A C C+ Sbjct: 62 EKGKALKANETNMLGKINEALDALENGDYGLCGNCQKEITKERLDFLPYAKYCAKCQ 118 >UniRef50_D1C0D4 Transcriptional regulator, TraR/DksA family n=2 Tax=Micrococcineae RepID=D1C0D4_XYLCX Length = 157 Score = 87.7 bits (216), Expect = 1e-16, Method: Composition-based stats. Identities = 30/125 (24%), Positives = 54/125 (43%), Gaps = 5/125 (4%) Query: 26 KPGEEYMNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAANFPD-----PVDRAAQEE 80 + GE+ A++ L A R++L E+ + + N D D + Sbjct: 33 RDGEDPWTLAEIQGLAGDLLADRDRLEAELAAADRELSELLRNSGDGAGDDQADYGSSAL 92 Query: 81 EFSLELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKT 140 E EL + R L+ + + +++++ + CE G+ IG RL+A P A L ++ K Sbjct: 93 EREQELTLVNNMRDLLAQTKHAIERIKAGTYATCEMTGLPIGKARLQAFPRATLSVEAKA 152 Query: 141 LAEIR 145 E R Sbjct: 153 REERR 157 >UniRef50_B5YGE3 DnaK suppressor protein n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YGE3_THEYD Length = 129 Score = 87.3 bits (215), Expect = 1e-16, Method: Composition-based stats. Identities = 32/120 (26%), Positives = 54/120 (45%), Gaps = 5/120 (4%) Query: 33 NEAQLAHFRRILEAWRNQLRDEVDRTVTHMQ-----DEAANFPDPVDRAAQEEEFSLELR 87 + + +++L + Q+ E + Q D D + + + L+ Sbjct: 4 EQERKNRLKKMLNQMKEQILKEAREEIKKFQTGEKRQIVEAVMDDADLSVIDLSEDISLK 63 Query: 88 NRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAEIREK 147 R ++KKIE+ L+K+E+ +G CE CG EI RL+ P A C DC+ E+ EK Sbjct: 64 QLSTHRDILKKIEEALRKLEEGTYGICEMCGDEIPEERLKILPFAIYCRDCQEKIEMIEK 123 >UniRef50_B2ULP7 Transcriptional regulator, TraR/DksA family n=1 Tax=Akkermansia muciniphila ATCC BAA-835 RepID=B2ULP7_AKKM8 Length = 207 Score = 87.3 bits (215), Expect = 1e-16, Method: Composition-based stats. Identities = 26/117 (22%), Positives = 49/117 (41%), Gaps = 7/117 (5%) Query: 41 RRILEAWRNQLRDEVDRTVT-------HMQDEAANFPDPVDRAAQEEEFSLELRNRDRER 93 R+ L R++ D + + + + D + + L +E+ Sbjct: 63 RQHLLDLRDRALDNMSGVARDTLRNHPEGSEASGSGEHQADAGSDAYDRDFALSLLSKEQ 122 Query: 94 KLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAEIREKQMA 150 + +IE+ L ++++ +G CE I I RLEA P A L ++C+ E + Q A Sbjct: 123 DGLYEIEQALARIDNGTYGICEMSYKVIPILRLEAIPFARLTVECQAQWEKEKGQNA 179 >UniRef50_A6FXL2 DnaK suppressor protein, putative n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6FXL2_9DELT Length = 132 Score = 86.9 bits (214), Expect = 2e-16, Method: Composition-based stats. Identities = 30/117 (25%), Positives = 54/117 (46%), Gaps = 1/117 (0%) Query: 30 EYMNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAA-NFPDPVDRAAQEEEFSLELRN 88 ++++E QLA R LE + +L + + + + + D D D+AA+E + Sbjct: 2 DHLSEQQLAGLRTKLETEQAELSERIASSTSVVADNLDPGRGDVEDQAAEEAGRFQAKQL 61 Query: 89 RDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAEIR 145 R+R + ++E L +V + ++G CE I RRLE PT + + E Sbjct: 62 LTRDRARLAEVEAALSRVAEGEYGICEESDEPIPFRRLELEPTTRYTVAAQEALEAE 118 >UniRef50_Q12HC6 Transcriptional regulators, TraR/DksA family n=1 Tax=Polaromonas sp. JS666 RepID=Q12HC6_POLSJ Length = 130 Score = 86.9 bits (214), Expect = 2e-16, Method: Composition-based stats. Identities = 33/117 (28%), Positives = 55/117 (47%), Gaps = 4/117 (3%) Query: 32 MNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDE----AANFPDPVDRAAQEEEFSLELR 87 + QL RR L QL+ EV + A + DP + A + LE Sbjct: 4 LRNDQLDLLRRALAERDAQLQVEVRAAKEVAAERPPATARDVQDPGEDAEERYRQGLEHV 63 Query: 88 NRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAEI 144 + R+++ ++ I++ +++ D +G C CG I RL+A+P+A CI C+T E Sbjct: 64 DLQRDQEELRAIQQAQERMADGSYGGCIDCGQPIPFERLKAQPSASRCIACQTRFEQ 120 >UniRef50_Q2BI57 Zn-finger, prokaryotic DksA/TraR C4 type n=1 Tax=Neptuniibacter caesariensis RepID=Q2BI57_9GAMM Length = 123 Score = 86.9 bits (214), Expect = 2e-16, Method: Composition-based stats. Identities = 34/120 (28%), Positives = 59/120 (49%), Gaps = 1/120 (0%) Query: 32 MNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQ-DEAANFPDPVDRAAQEEEFSLELRNRD 90 +N +++A F+ L+ QLR E + + + D + A + + + N Sbjct: 4 LNLSEIAAFKAELKDLLEQLRAEAGEEYSEQTKQQDLHVHDSGEEAEAVVDLMMHVENLA 63 Query: 91 RERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAEIREKQMA 150 R + I LK++++ DFG+C CG EI + RL A PTA CI C+++ E ++ A Sbjct: 64 RHDEEIADCLAALKRIDEGDFGFCLDCGEEIELSRLRACPTASRCIRCQSVLEAEVRKTA 123 >UniRef50_D0LJW3 Transcriptional regulator, TraR/DksA family n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LJW3_HALO1 Length = 142 Score = 86.5 bits (213), Expect = 2e-16, Method: Composition-based stats. Identities = 34/141 (24%), Positives = 64/141 (45%), Gaps = 1/141 (0%) Query: 8 KTSSLSILAIAGVEPYQEKPGEEYMNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAA 67 K +S A P + ++ QL L +L +E+ R ++ EA Sbjct: 2 KDASRETAASEAAGPVLRADPDASLSAKQLRALYDKLRGEEARLAEEIRRHISEAT-EAE 60 Query: 68 NFPDPVDRAAQEEEFSLELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLE 127 PD D+A+Q + LR D++ K ++++ + L+K++ ++G CE G IG++RL Sbjct: 61 RHPDEGDQASQNANQAYLLRYADKQNKQLQQVRRALQKLQTGEYGVCEGSGEPIGVQRLM 120 Query: 128 ARPTADLCIDCKTLAEIREKQ 148 RP ++ K + + Sbjct: 121 LRPWTRYSVEYKEQIDRERRH 141 >UniRef50_B4UII3 Transcriptional regulator, TraR/DksA family n=4 Tax=Anaeromyxobacter RepID=B4UII3_ANASK Length = 144 Score = 86.5 bits (213), Expect = 2e-16, Method: Composition-based stats. Identities = 31/134 (23%), Positives = 54/134 (40%), Gaps = 2/134 (1%) Query: 15 LAIAGVEPYQEKPGEEYMNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAANFPDPV- 73 +A G E +++ L R L R L + R + + DP Sbjct: 1 MAGPGALHLSPLRKERNVSDNDLGPLRAQLLRRRGTLLETSRRASAELDALRSADRDPEF 60 Query: 74 -DRAAQEEEFSLELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTA 132 + A E E R + +R+ + +I+ + +++ ++G C C +I RRL A P A Sbjct: 61 EEGAQAEHEQYTLARLGENQRRELVQIDAAIARIDAGEYGICRDCEQDIDPRRLAALPYA 120 Query: 133 DLCIDCKTLAEIRE 146 LC +C E + Sbjct: 121 VLCTECAQRRERAQ 134 >UniRef50_B2V854 Transcriptional regulator, TraR/DksA family n=4 Tax=Hydrogenothermaceae RepID=B2V854_SULSY Length = 147 Score = 86.5 bits (213), Expect = 2e-16, Method: Composition-based stats. Identities = 34/115 (29%), Positives = 60/115 (52%), Gaps = 3/115 (2%) Query: 32 MNEAQLAHFRRILEAWRNQLRDEV---DRTVTHMQDEAANFPDPVDRAAQEEEFSLELRN 88 M++ +L FRR+L R+Q+ + + T + +++A D + A + + + Sbjct: 1 MDKNKLQKFRRLLLKKRSQILERYLKKEETEKVLTEQSAEPRDLEEYANIDITEEILAQL 60 Query: 89 RDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAE 143 D E +++K I+ TL+++++ +G CE CG EI RLEA P LCI E Sbjct: 61 SDVEIEILKAIDDTLERIQNGTYGICEVCGKEIEEERLEAVPWTTLCIQHAKEQE 115 >UniRef50_D2R7B0 Transcriptional regulator, TraR/DksA family n=2 Tax=Planctomycetaceae RepID=D2R7B0_9PLAN Length = 123 Score = 86.5 bits (213), Expect = 2e-16, Method: Composition-based stats. Identities = 21/89 (23%), Positives = 38/89 (42%), Gaps = 1/89 (1%) Query: 55 VDRTVTHMQDEAANFP-DPVDRAAQEEEFSLELRNRDRERKLIKKIEKTLKKVEDEDFGY 113 + +T + + ++ P D E L + + +++IE L+++E +G Sbjct: 32 LGKTRSENSGDLSSMPIHMADVGTDNFEQEFTLSLMEHDGSTLEQIEAALERIEAGAYGV 91 Query: 114 CESCGVEIGIRRLEARPTADLCIDCKTLA 142 C CG +I RLE P C+ C A Sbjct: 92 CTECGCKIPKARLEVLPYTAHCVKCAEKA 120 >UniRef50_Q029W8 Transcriptional regulator, TraR/DksA family n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q029W8_SOLUE Length = 149 Score = 86.5 bits (213), Expect = 2e-16, Method: Composition-based stats. Identities = 29/120 (24%), Positives = 51/120 (42%), Gaps = 2/120 (1%) Query: 27 PGEEYMNEAQLAHFRRILEAWRNQLRDEVD-RTVTHMQDEAANFPDPVDRAAQEEEFSLE 85 E+ M A +R+ILE ++R + + + D D + Q E + Sbjct: 16 STEKPMKPK-TATYRKILEKKAEEVRRSMSAQKAAQVVARLDIPSDEGDLSQQHHEEWIF 74 Query: 86 LRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAEIR 145 L + KL+++I L +++ +G C C I +RL+A P A C+ C+ R Sbjct: 75 LNRNTIDMKLLREIADALHRMDTGHYGVCPECEEPISAKRLDAVPWARYCVTCQEKIAAR 134 >UniRef50_Q7UEL7 Probable dnaK (DksA-like) supressor protein n=1 Tax=Rhodopirellula baltica RepID=Q7UEL7_RHOBA Length = 121 Score = 86.5 bits (213), Expect = 2e-16, Method: Composition-based stats. Identities = 27/106 (25%), Positives = 49/106 (46%), Gaps = 1/106 (0%) Query: 42 RILEAWRNQLRDEVDRTVTHMQDEAAN-FPDPVDRAAQEEEFSLELRNRDRERKLIKKIE 100 L+ ++++ V +Q + + D DR + L R + E + + IE Sbjct: 12 NKLQRRAAEIQEMVRTEFAELQHVSDHTVGDAGDRGIESHASELTSRMAESESRELADIE 71 Query: 101 KTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAEIRE 146 + L+++ D FG CE CG I + RL+ P A C+ C+ +E + Sbjct: 72 EALERLRDGTFGDCEDCGKSIPMNRLQVVPHARRCVRCQKASENSQ 117 >UniRef50_Q8ESP2 Hypothetical conserved protein n=1 Tax=Oceanobacillus iheyensis RepID=Q8ESP2_OCEIH Length = 224 Score = 86.5 bits (213), Expect = 2e-16, Method: Composition-based stats. Identities = 25/114 (21%), Positives = 47/114 (41%), Gaps = 9/114 (7%) Query: 33 NEAQLAHFRRILEAWRNQLRDEVDRTV---------THMQDEAANFPDPVDRAAQEEEFS 83 ++ Q + L ++ L ++V R + + + P D + E Sbjct: 3 SKQQQLQCKEALLQRQSTLIEQVQRHTFGLDVEFAREDVGELSNYDNHPGDTGTELFERE 62 Query: 84 LELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCID 137 ++ ++ K ++ I L +E+ +G C CG +I RLEA PT D C+ Sbjct: 63 KDIALQEHTEKELEDINAALHAIEEGTYGICTVCGEDIPHERLEAIPTTDRCVK 116 >UniRef50_Q39WX5 Transcriptional regulators, TraR/DksA family n=4 Tax=Geobacter RepID=Q39WX5_GEOMG Length = 130 Score = 86.5 bits (213), Expect = 3e-16, Method: Composition-based stats. Identities = 29/117 (24%), Positives = 53/117 (45%), Gaps = 5/117 (4%) Query: 32 MNEAQLAHFRRILEAWRNQLRDEVDRTV-----THMQDEAANFPDPVDRAAQEEEFSLEL 86 M+ + +L A + +L EV R + +Q + D DR + + Sbjct: 4 MSRERQERLMELLLAEKRRLWGEVRRELFGQVGGELQSQNDLPQDVGDRGLIDTLEDTGM 63 Query: 87 RNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAE 143 D R+ + ++++ L ++++ +G+C+ CG EI RL P A CI C+T E Sbjct: 64 AVADIRRQELTRMDEALGRLKEGRYGFCDECGAEIDEGRLRVAPYAPCCISCQTRRE 120 >UniRef50_A6DK24 DnaK suppressor, putative n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DK24_9BACT Length = 147 Score = 85.4 bits (210), Expect = 5e-16, Method: Composition-based stats. Identities = 27/103 (26%), Positives = 47/103 (45%), Gaps = 1/103 (0%) Query: 42 RILEAWRNQLRDEVDRTVT-HMQDEAANFPDPVDRAAQEEEFSLELRNRDRERKLIKKIE 100 L A R QL D+V ++Q E D D + + L E ++ ++ Sbjct: 27 EQLLALRAQLVDQVSMLNGVNLQVERNAGEDGGDVGSDNFMREINLNVMSDEGIKVQLVQ 86 Query: 101 KTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAE 143 + ++++++ +G C C +I RL+A P A LC+ CK E Sbjct: 87 QAIERLDEGKYGRCVDCRDDIPEARLDAIPYAKLCVACKETRE 129 >UniRef50_C3XG00 DnaK suppressor protein n=1 Tax=Helicobacter bilis ATCC 43879 RepID=C3XG00_9HELI Length = 122 Score = 85.4 bits (210), Expect = 6e-16, Method: Composition-based stats. Identities = 36/118 (30%), Positives = 58/118 (49%), Gaps = 1/118 (0%) Query: 32 MNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAA-NFPDPVDRAAQEEEFSLELRNRD 90 M + L R+ LE L +Q+ +A + D + + + + + Sbjct: 1 MRDEDLLSLRQTLEKRLEYLDGLSLNLHKSLQEMSALKLNENADIISTQSQLRFDDSMLE 60 Query: 91 RERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAEIREKQ 148 R +K +K+I +L K +D +G CE C EIGI RL+A+P A CI+C+ + E EKQ Sbjct: 61 RNQKEMKEISASLAKFDDGIYGICEMCEDEIGIERLQAKPHARFCINCREIYEKSEKQ 118 >UniRef50_B3QWB1 Transcriptional regulator, TraR/DksA family n=1 Tax=Chloroherpeton thalassium ATCC 35110 RepID=B3QWB1_CHLT3 Length = 208 Score = 85.0 bits (209), Expect = 6e-16, Method: Composition-based stats. Identities = 29/149 (19%), Positives = 61/149 (40%), Gaps = 7/149 (4%) Query: 1 MQEGQNRKTSSLSILAIAGVEPYQEKPGEEYMNEAQLAHFRRILEAWRNQLRDEVDRTVT 60 M + +S+ S+ Q++ Y++ +L HF ++L R ++ +++ + Sbjct: 60 MSAKTRKVSSAPSMENENSKHEEQDRLSVTYLSAKELKHFEQLLLKKREEVLRDLEILKS 119 Query: 61 HMQDEAANFP-------DPVDRAAQEEEFSLELRNRDRERKLIKKIEKTLKKVEDEDFGY 113 DE D + + R+ K + I+K L++++++ +G Sbjct: 120 SFSDENEEDSVNSSYSMHMADHGTETMDREQRFLFISRDEKYLSYIDKALERIKNKTYGI 179 Query: 114 CESCGVEIGIRRLEARPTADLCIDCKTLA 142 C G I RLEA P + I+ K + Sbjct: 180 CAISGKPIPKARLEAVPHTGVRIEYKKRS 208 >UniRef50_B3ES66 Putative uncharacterized protein n=1 Tax=Candidatus Amoebophilus asiaticus 5a2 RepID=B3ES66_AMOA5 Length = 138 Score = 85.0 bits (209), Expect = 7e-16, Method: Composition-based stats. Identities = 30/123 (24%), Positives = 51/123 (41%) Query: 21 EPYQEKPGEEYMNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAANFPDPVDRAAQEE 80 Y YM++ +A+F++ L L E + + D + V+ + EE Sbjct: 12 PNYDPLQDPTYMSDNMVAYFKQKLNKKLEDLIKEEELIAINKADGPRREAEYVENSQIEE 71 Query: 81 EFSLELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKT 140 E E L +++E L ++ +GYCE G IG+RRL A P A + + Sbjct: 72 LSLEENLPLQNEDFLKREVEDALYRINLGTYGYCEETGDPIGVRRLLAFPMARYTTEVQK 131 Query: 141 LAE 143 + Sbjct: 132 QKD 134 >UniRef50_A1QYW3 DnaK suppressor protein n=21 Tax=Borrelia RepID=A1QYW3_BORT9 Length = 127 Score = 85.0 bits (209), Expect = 7e-16, Method: Composition-based stats. Identities = 25/115 (21%), Positives = 49/115 (42%), Gaps = 3/115 (2%) Query: 37 LAHFRRILEAWRNQLRDEV---DRTVTHMQDEAANFPDPVDRAAQEEEFSLELRNRDRER 93 + R L + ++ + + + + + + + D +D A + + E+ Sbjct: 11 VEKMRNFLLESKKEILNSIRSVEDSKREIINNDMHLKDIIDIAFDNMDGNNLEALSSVEK 70 Query: 94 KLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAEIREKQ 148 K + I + L ++ +G C +C I RL A P A LCI C+T E + K+ Sbjct: 71 KKLHLINQALYRISQNTYGNCLACDKSITRERLVAIPYAFLCISCQTKKEKKGKR 125 >UniRef50_A9AKZ2 Transcriptional regulator, TraR/DksA family n=5 Tax=Burkholderia multivorans RepID=A9AKZ2_BURM1 Length = 256 Score = 84.6 bits (208), Expect = 8e-16, Method: Composition-based stats. Identities = 31/126 (24%), Positives = 51/126 (40%), Gaps = 5/126 (3%) Query: 25 EKPGEEYMNEAQLAHFRRILEAWRNQLRDEV-----DRTVTHMQDEAANFPDPVDRAAQE 79 E+ ++E Q + L LR E+ R + A PD D A + Sbjct: 122 EQETAMALDERQRHALLQQLNECEQALRAELRASEDQRASESYAELAGASPDEGDEANAD 181 Query: 80 EEFSLELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCK 139 ++ + ++ I + +++ D +G C C +G RL ARPTA+ C C+ Sbjct: 182 LFVDVDHALIGMKLAELRAIRRAQQRMVDGSYGDCIDCDGPVGYARLRARPTAERCTHCQ 241 Query: 140 TLAEIR 145 L E R Sbjct: 242 ALYERR 247 >UniRef50_Q5WGI4 General stress protein GSP160 n=1 Tax=Bacillus clausii KSM-K16 RepID=Q5WGI4_BACSK Length = 174 Score = 84.6 bits (208), Expect = 9e-16, Method: Composition-based stats. Identities = 29/117 (24%), Positives = 55/117 (47%), Gaps = 5/117 (4%) Query: 32 MNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAANFPDPVD-----RAAQEEEFSLEL 86 ++E QLAH + L +++L + RT M D + D A++ E+ ++ Sbjct: 3 LSEKQLAHLKHKLLEMKDELETKKRRTTGEMSDSRGDIARGADNHIGETASEYEDRVIQQ 62 Query: 87 RNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAE 143 + ++K ++ I + L+++E+ +G C G I RLEA P A + + E Sbjct: 63 SLNEADQKRLQDITEALERIEEGTYGICIDTGQPIPYERLEALPYAKRTPEAQREKE 119 >UniRef50_A4X6U9 Zinc finger, DksA/TraR C4-type n=4 Tax=Micromonosporaceae RepID=A4X6U9_SALTO Length = 132 Score = 83.8 bits (206), Expect = 2e-15, Method: Composition-based stats. Identities = 33/120 (27%), Positives = 59/120 (49%), Gaps = 10/120 (8%) Query: 34 EAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAANFPDPVDRAAQEE-EFSLELRNRDRE 92 +A+ R+ L+A ++L E ++ V +Q + + D A ++ + + RD Sbjct: 13 QAEADQIRQSLKARYDELAAEYEQAV--LQSQVLRLVEVGDTAGDDQADSGTKTAERDTA 70 Query: 93 RKLIKKI-------EKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAEIR 145 + L++ I E L ++E+ +G+CE CG I + RLE P+A C+ CK E R Sbjct: 71 QSLLRTILDRRAQFEHALTRLEEGTYGFCEGCGASIPVERLEIFPSATTCVTCKQTRERR 130 >UniRef50_D1N407 Transcriptional regulator, TraR/DksA family n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1N407_9BACT Length = 133 Score = 83.5 bits (205), Expect = 2e-15, Method: Composition-based stats. Identities = 26/87 (29%), Positives = 42/87 (48%), Gaps = 3/87 (3%) Query: 63 QDEAANFPDPVDRAAQEEEFSLELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIG 122 D+ D ++ +EL+ E +++ IE +K++ D ++G C+ CG I Sbjct: 45 ADKRGVTTHMADVSSDNSRHEMELQLLSEEGDVLRLIEDAIKRLVDGEYGKCQECGEPIS 104 Query: 123 IRRLEARPTADLCIDCKTLAEIREKQM 149 RL RP A C+ CK E+ EKQ Sbjct: 105 EGRLAIRPYAVYCVKCK---EMHEKQG 128 >UniRef50_B8DLC7 Transcriptional regulator, TraR/DksA family n=1 Tax=Desulfovibrio vulgaris str. 'Miyazaki F' RepID=B8DLC7_DESVM Length = 119 Score = 83.5 bits (205), Expect = 2e-15, Method: Composition-based stats. Identities = 39/117 (33%), Positives = 57/117 (48%), Gaps = 4/117 (3%) Query: 32 MNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAANFPDPVDRAAQEEEFSLELRNRDR 91 M E +A RR L+ LR+ +DR E A+ P+ + S + R R Sbjct: 1 MREETIAVVRRRLKQEIRDLREALDRWRGLQGVEDASDPERMPDVEGMTYRSWKQRTETR 60 Query: 92 ERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAEIREKQ 148 ++ + TL++++DEDFGYC+ CG EI RL A PT C+ C + E R Q Sbjct: 61 ----LQVLRATLERLDDEDFGYCDDCGNEIPAARLLAVPTTTRCVHCMSAREERGAQ 113 >UniRef50_B1ZV03 Transcriptional regulator, TraR/DksA family n=2 Tax=Opitutaceae RepID=B1ZV03_OPITP Length = 297 Score = 83.5 bits (205), Expect = 2e-15, Method: Composition-based stats. Identities = 25/149 (16%), Positives = 52/149 (34%), Gaps = 12/149 (8%) Query: 10 SSLSILAIAGVEPYQEK---PGEEYMNEAQLAHFRRILEAWRNQLRDEVD---------R 57 + S+ I G P + + P + + + ++L R QL + ++ Sbjct: 121 KAASLSDILGFNPKRSRVTAPDDVEKVPEKYRRYYKLLLDLRKQLTEGIELHSEETLKRS 180 Query: 58 TVTHMQDEAANFPDPVDRAAQEEEFSLELRNRDRERKLIKKIEKTLKKVEDEDFGYCESC 117 + D ++ D + L E++ + +I+ +K++ D +G CE Sbjct: 181 SKEDSGDLSSYGQHMADAGTDTFDRDFALSLVSSEQEALTEIDAAIKRIHDGTYGICEIT 240 Query: 118 GVEIGIRRLEARPTADLCIDCKTLAEIRE 146 I RL A P + + E Sbjct: 241 QKPIAKERLLAVPFTRYSAEAQKDLEKNR 269 >UniRef50_UPI0001C4239D hypothetical protein BpOF4_09730 n=1 Tax=Bacillus pseudofirmus OF4 RepID=UPI0001C4239D Length = 215 Score = 83.1 bits (204), Expect = 2e-15, Method: Composition-based stats. Identities = 29/115 (25%), Positives = 44/115 (38%), Gaps = 9/115 (7%) Query: 32 MNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAAN---------FPDPVDRAAQEEEF 82 + QL L + ++ D V + E P D A + + Sbjct: 2 LTNEQLQTLENKLLQMKKEIEDRVSDDTSEADLENQGEDTGELSNYDNHPGDLATELHDR 61 Query: 83 SLELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCID 137 LE + +++I + L +ED +G CE CG I RLEA PTA I+ Sbjct: 62 ELEAALDQHSKDELEEINQALAAIEDGTYGICEVCGEPIPFERLEALPTARRRIE 116 >UniRef50_B3ELW2 Transcriptional regulator, TraR/DksA family n=11 Tax=Chlorobiaceae RepID=B3ELW2_CHLPB Length = 147 Score = 83.1 bits (204), Expect = 3e-15, Method: Composition-based stats. Identities = 23/117 (19%), Positives = 54/117 (46%), Gaps = 7/117 (5%) Query: 31 YMNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAANFP-------DPVDRAAQEEEFS 83 Y+++ +L HF+++L R ++ +++ + + +E+ D + + Sbjct: 26 YLSDDELEHFKQLLLKRREEVLRDLEILKSSLSEESVEDSINSNYSMHMADHGTETMDRE 85 Query: 84 LELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKT 140 R+ K + I++ L+++ ++ +G C G I +RLEA P + I+ K Sbjct: 86 QRFMFIARDEKYLGYIDQALERIRNKTYGVCAKSGKPIPKKRLEAVPHTSVRIEFKE 142 >UniRef50_A0Q071 General stress protein, DnaK suppressor DskA n=3 Tax=Clostridium RepID=A0Q071_CLONN Length = 206 Score = 83.1 bits (204), Expect = 3e-15, Method: Composition-based stats. Identities = 26/122 (21%), Positives = 50/122 (40%), Gaps = 9/122 (7%) Query: 32 MNEAQLAHFRRILEAWRNQLRDEVDR---------TVTHMQDEAANFPDPVDRAAQEEEF 82 M E + HFR L + Q+ + +++ + + + P D + + Sbjct: 1 MKEKRKQHFRDKLYKEKKQVEELINKIKEFEPVKFSSEANSELSIYSNHPADIGQEFLDK 60 Query: 83 SLELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLA 142 + + E + + +I ++L +E +G C C +I RLEA P A C+ CK Sbjct: 61 AKGIALEKAELEKLHEISESLYDMEHGTYGICRICKNQIPDDRLEAVPYAKYCVHCKNNQ 120 Query: 143 EI 144 + Sbjct: 121 DK 122 >UniRef50_Q1D0G7 C4-type zinc finger domain protein, DksA/TraR family n=2 Tax=Cystobacterineae RepID=Q1D0G7_MYXXD Length = 130 Score = 82.7 bits (203), Expect = 3e-15, Method: Composition-based stats. Identities = 32/111 (28%), Positives = 51/111 (45%), Gaps = 3/111 (2%) Query: 32 MNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAANFPDPVDRAAQEEEFSLELRNRDR 91 MN Q + +L A ++L D+ + + + A D E NR+R Sbjct: 1 MNAKQRDELKALLLALHSELTDKTPSRIEPNRTDDARIGGDEDEQPLNEMMQAIASNRNR 60 Query: 92 ERK-LIKKIEKTLKKVEDE--DFGYCESCGVEIGIRRLEARPTADLCIDCK 139 ++ ++ K L K+ D+ FG CE CG EI + RL A P A+ C+ C+ Sbjct: 61 NMDGVLARVLKALGKLRDDPDAFGECEECGDEIPLGRLRAMPYAEFCVTCQ 111 >UniRef50_C0R4V6 DnaK suppressor protein, putative n=6 Tax=Wolbachia RepID=C0R4V6_WOLWR Length = 130 Score = 82.7 bits (203), Expect = 3e-15, Method: Composition-based stats. Identities = 38/129 (29%), Positives = 64/129 (49%), Gaps = 13/129 (10%) Query: 17 IAGVEPYQEKPGEEYMNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAANFPDPVDRA 76 I E Y EEYM+ QL +F L++ +L + ++D + + Sbjct: 7 IKSPEDYNPSEDEEYMSVKQLEYFSLKLQSILAELEKQ------ELEDNSIDT-----YY 55 Query: 77 AQEEEFSLELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCI 136 + E+ + EL R ++RK KI++ L+K++ +GYC+ G EIG+ RL+A P A CI Sbjct: 56 SDEDSGNEELIKRRKDRKE--KIKEALEKIKLGTYGYCDGTGEEIGVERLKANPLAIYCI 113 Query: 137 DCKTLAEIR 145 + + E Sbjct: 114 EEQERVEKE 122 >UniRef50_Q3A5P4 DnaK suppressor protein n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A5P4_PELCD Length = 127 Score = 82.7 bits (203), Expect = 3e-15, Method: Composition-based stats. Identities = 33/121 (27%), Positives = 50/121 (41%), Gaps = 1/121 (0%) Query: 32 MNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDE-AANFPDPVDRAAQEEEFSLELRNRD 90 M + +L R+ L R E+ R D D+ + D Sbjct: 1 MIQKRLESIRKKLLDLREARLQEIRRQNADAAALIDEGVADTADQGLTDSLKDYLHLLGD 60 Query: 91 RERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAEIREKQMA 150 R+ I +I++ L+++ D +G CE+CG I I RLE P C+ C+ AE K A Sbjct: 61 AGREEILEIDEALERLRDGSYGRCEACGKTIDIARLEILPFTRRCLTCRQEAEKEAKTKA 120 Query: 151 G 151 G Sbjct: 121 G 121 >UniRef50_Q0AHN9 Transcriptional regulators, TraR/DksA family protein n=3 Tax=Proteobacteria RepID=Q0AHN9_NITEC Length = 135 Score = 82.3 bits (202), Expect = 4e-15, Method: Composition-based stats. Identities = 26/121 (21%), Positives = 50/121 (41%), Gaps = 5/121 (4%) Query: 29 EEYMNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDE-----AANFPDPVDRAAQEEEFS 83 E + + Q+ HF + ++A ++ L E+ + + ++E D D A Sbjct: 5 ENSLTKEQITHFAQRIDARKSLLLGEIRQVLARSRNEYYVDLIGGAGDSGDTATASLLRD 64 Query: 84 LELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAE 143 + R+ ++ I ++ +G C CG + +RL+A PTA C C+ E Sbjct: 65 ITEAEVIRDIGEVRDIVAAEDRIATGKYGLCIDCGEPVRYKRLDAYPTAKRCFTCQVRRE 124 Query: 144 I 144 Sbjct: 125 R 125 >UniRef50_B8H9G6 Transcriptional regulator, TraR/DksA family n=3 Tax=Micrococcineae RepID=B8H9G6_ARTCA Length = 118 Score = 82.3 bits (202), Expect = 5e-15, Method: Composition-based stats. Identities = 29/110 (26%), Positives = 43/110 (39%), Gaps = 7/110 (6%) Query: 35 AQLAHFRRILEAWRN-------QLRDEVDRTVTHMQDEAANFPDPVDRAAQEEEFSLELR 87 A FR +LE R LR ++ + Q + + A E S Sbjct: 2 ADYERFRLLLEEERQLKLALLPALRADIAAANSARQGANVDDEHDPEGATIAFELSQASA 61 Query: 88 NRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCID 137 ++ + ++E L ++ D +G C CG I RLEARP CID Sbjct: 62 LLNQSSAGLDQVEAALTRIADGTYGSCAVCGRPIAEGRLEARPWTPYCID 111 >UniRef50_A3IED4 DnaK suppressor protein n=2 Tax=Bacillaceae RepID=A3IED4_9BACI Length = 150 Score = 82.3 bits (202), Expect = 5e-15, Method: Composition-based stats. Identities = 29/113 (25%), Positives = 53/113 (46%), Gaps = 1/113 (0%) Query: 32 MNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAANFPD-PVDRAAQEEEFSLELRNRD 90 M++ + +R LE ++ +D + E +N+ + P D A+ + E+ + Sbjct: 1 MDQQVMQKLKRQLEQELQEIEKRIDESERPQATELSNYDNHPADNASDLTDQLTEMAIDE 60 Query: 91 RERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAE 143 ++I++ L+ + D +G C CG EI I RLEA P A C++ E Sbjct: 61 HRGDNAEEIKEALQAMADGTYGECTVCGKEIPIGRLEAMPQALTCVEHAEKKE 113 >UniRef50_Q182T9 Putative general stress protein n=7 Tax=Clostridium RepID=Q182T9_CLOD6 Length = 163 Score = 81.9 bits (201), Expect = 5e-15, Method: Composition-based stats. Identities = 22/126 (17%), Positives = 45/126 (35%), Gaps = 15/126 (11%) Query: 32 MNEAQLAHFRRILEAWRNQLRDEVDRTVTH---------------MQDEAANFPDPVDRA 76 M + ++ L R L + V+ + + ++ D Sbjct: 1 MLKMDTKKYKDKLLKERENLTNLVEDMKDNTLFGDTTKHTSEKYSSGELSSYDNHIGDMG 60 Query: 77 AQEEEFSLELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCI 136 +++ + E + +I+ L K+E+ +G C+ C +I + RL+ P LC Sbjct: 61 TDLYMQNMQNSLINHEEGRLYQIDLALSKIENGTYGICDLCHNQIDLERLDILPDTSLCN 120 Query: 137 DCKTLA 142 DC Sbjct: 121 DCAKKE 126 >UniRef50_D2R2J7 Transcriptional regulator, TraR/DksA family n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2R2J7_9PLAN Length = 148 Score = 81.9 bits (201), Expect = 6e-15, Method: Composition-based stats. Identities = 21/89 (23%), Positives = 44/89 (49%), Gaps = 2/89 (2%) Query: 57 RTVTHMQDEAANFPDPVDRAAQEEEFSLELRNRDRERKLIKKIEKTLKKVEDEDFGYCES 116 ++ ++ + + D +D A + + + + E + + I+ L+++ ++G CE Sbjct: 30 SSLKELRQQTS--GDVMDAAMDTAQDEINSQLAEVESRELAHIDTALERMRSGNYGACEG 87 Query: 117 CGVEIGIRRLEARPTADLCIDCKTLAEIR 145 C I + RL+A P A +CI C+ AE Sbjct: 88 CNEPIPLLRLQALPYAVMCIKCQREAEKN 116 >UniRef50_C1A882 Putative uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A882_GEMAT Length = 127 Score = 81.5 bits (200), Expect = 7e-15, Method: Composition-based stats. Identities = 29/122 (23%), Positives = 47/122 (38%), Gaps = 10/122 (8%) Query: 32 MNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAANFPDP--------VDRAAQEEEFS 83 M + QL +F + L R ++ E+ A D D+ E Sbjct: 1 MPKKQLQYFEKRLLDERKRVLKELGHHGEAFGPNADAENDDSSAYSFHMADQGTDAMERE 60 Query: 84 LELRNRDRERKLIKKIEKTLKKV--EDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTL 141 +E + + +++ L+++ FG C CG +I RL+A P A CI CK Sbjct: 61 KAFLFASKEGRFLWHLDQALRRLYKAPATFGKCHQCGEDIAFERLDALPNARYCIACKQR 120 Query: 142 AE 143 E Sbjct: 121 EE 122 >UniRef50_C9NIY3 Transcriptional regulator, TraR/DksA family n=3 Tax=Streptomyces RepID=C9NIY3_9ACTO Length = 131 Score = 81.5 bits (200), Expect = 7e-15, Method: Composition-based stats. Identities = 30/112 (26%), Positives = 48/112 (42%) Query: 27 PGEEYMNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAANFPDPVDRAAQEEEFSLEL 86 PG+ +L RR EA L + D V A + + ++ E + Sbjct: 14 PGDRISVRERLDAERRDTEARIAALHGDFDAIVEANALVAVDDEHDPEGSSTAFERAHTA 73 Query: 87 RNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDC 138 R R + ++++ L+++E D+G CE C I RLE RP A C+ C Sbjct: 74 SLLARARDHLAEVDRALERLERGDYGRCERCREPIPPGRLEVRPAATTCVRC 125 >UniRef50_D1BG79 DnaK suppressor protein n=1 Tax=Sanguibacter keddieii DSM 10542 RepID=D1BG79_SANKS Length = 129 Score = 81.5 bits (200), Expect = 8e-15, Method: Composition-based stats. Identities = 27/102 (26%), Positives = 43/102 (42%) Query: 37 LAHFRRILEAWRNQLRDEVDRTVTHMQDEAANFPDPVDRAAQEEEFSLELRNRDRERKLI 96 L RR L ++ E+ D + + A ++S R + Sbjct: 22 LDERRRALLDELARVDGELRTVREAKTDGTDDDEHDPEGATMSTQWSHATGLRSAVVLQL 81 Query: 97 KKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDC 138 ++++ L ++ +G C CG I RLEARP+A LCIDC Sbjct: 82 EEVDGALARIAAGTYGTCTRCGRPISAGRLEARPSAPLCIDC 123 >UniRef50_Q2BN62 DnaK suppressor protein, putative n=1 Tax=Neptuniibacter caesariensis RepID=Q2BN62_9GAMM Length = 122 Score = 81.5 bits (200), Expect = 8e-15, Method: Composition-based stats. Identities = 33/116 (28%), Positives = 63/116 (54%), Gaps = 2/116 (1%) Query: 31 YMNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAANFP--DPVDRAAQEEEFSLELRN 88 +++E ++ L + R++L +E+D Q + V R ++ S+ N Sbjct: 4 FIDEIEVESLLEKLHSLRHELDEEIDSLQKESQPVQLDQQAFGRVSRGEALQQQSMAKAN 63 Query: 89 RDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAEI 144 + ++ I++I++ L+K++ ED+GYC++CG I + RL ARP + LCI C+ E Sbjct: 64 LAQCQERIRQIDEALQKIDAEDYGYCDACGERIALARLNARPESPLCISCQEKQEQ 119 >UniRef50_Q02C95 Transcriptional regulator, TraR/DksA family n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q02C95_SOLUE Length = 128 Score = 81.2 bits (199), Expect = 9e-15, Method: Composition-based stats. Identities = 27/115 (23%), Positives = 48/115 (41%), Gaps = 4/115 (3%) Query: 25 EKPGEEYMNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAANFPDPVDRAAQEEEFSL 84 K GE+ + + R L R + + D D+A + + Sbjct: 1 MKKGEKALRPQDIH--RAKLLEKRASVLSGLGMKFDTRARMGRVAED--DQAQISHDEFV 56 Query: 85 ELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCK 139 LR + + ++ +E+ L ++E DFG C +C I +RL+A P A C+ C+ Sbjct: 57 SLRMNGLDYRQLRMVEEALDRLESGDFGICLACDESIAEKRLQALPWARYCVKCQ 111 >UniRef50_B5JMU6 Putative uncharacterized protein n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JMU6_9BACT Length = 280 Score = 81.2 bits (199), Expect = 9e-15, Method: Composition-based stats. Identities = 28/158 (17%), Positives = 56/158 (35%), Gaps = 15/158 (9%) Query: 3 EGQNRKTS--SLSILAIAGVEPYQEKPGEEYMNEA----QLAHFRRILEAWRNQLRDEVD 56 E + +K S + S+ I G P P + +E + F +L R+ +++ ++ Sbjct: 92 EAKKQKQSFGAASLADILGYNPAAPTPTVKKRDEKDVPAKYKKFYALLIELRDHVKNGLN 151 Query: 57 RTVTH---------MQDEAANFPDPVDRAAQEEEFSLELRNRDRERKLIKKIEKTLKKVE 107 D + D + L E+ +++IE+ + ++ Sbjct: 152 THAEETLKRSSKDDSGDLSGYSQHMADAGTDTFDRDFALSMVSSEQDALQEIEEAIDRIF 211 Query: 108 DEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAEIR 145 +G CE G +I RL A P + + E Sbjct: 212 KGTYGICEMTGKQIREERLMAVPFTRYSMKTQEQIEKN 249 >UniRef50_Q5WFI4 Putative uncharacterized protein n=1 Tax=Bacillus clausii KSM-K16 RepID=Q5WFI4_BACSK Length = 207 Score = 81.2 bits (199), Expect = 1e-14, Method: Composition-based stats. Identities = 23/108 (21%), Positives = 45/108 (41%), Gaps = 3/108 (2%) Query: 32 MNEAQLAHFRRILEAWRNQLRDEVDRTV--THMQDEAANFPDPVDRAAQEEEFSLELRNR 89 M++ L ++ L+ +++L + + + + P D A E + Sbjct: 1 MDQKWL-KLKQALQQQKHELEQTLANQINDHDTGELSQYDNHPADTATDLFEREKDQAVH 59 Query: 90 DRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCID 137 + + + ++E L+K D +G CE G I RLEA P A ++ Sbjct: 60 NHIKDELHEVEHALEKFNDGSYGICEKTGKAIPYERLEAYPAARTVVE 107 >UniRef50_C6I0P9 Transcriptional regulator, TraR/DksA family n=3 Tax=Leptospirillum RepID=C6I0P9_9BACT Length = 136 Score = 81.2 bits (199), Expect = 1e-14, Method: Composition-based stats. Identities = 29/123 (23%), Positives = 57/123 (46%), Gaps = 7/123 (5%) Query: 32 MNEAQLAHFR--RILEAWRNQLRDEVDRTVTHM-----QDEAANFPDPVDRAAQEEEFSL 84 MN+ + + R +L + + ++ + + + D D +A + + Sbjct: 1 MNDKSVRYQRLYNLLSEKKAAIEKDIRTHLVRQIGPDNANRVDSVLDQGDLSAIDMGEGV 60 Query: 85 ELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAEI 144 +L + ++ + +++ L ++E+ +G CE CG EI +RL A P A LCI C+ E Sbjct: 61 DLALLEMRNRMKRSVDQALLRLEEGSYGNCEDCGGEIEEKRLMAMPFAQLCIKCQRKKEE 120 Query: 145 REK 147 EK Sbjct: 121 LEK 123 >UniRef50_C7R8Q8 Transcriptional regulator, TraR/DksA family n=1 Tax=Kangiella koreensis DSM 16069 RepID=C7R8Q8_KANKD Length = 120 Score = 80.4 bits (197), Expect = 2e-14, Method: Composition-based stats. Identities = 28/118 (23%), Positives = 58/118 (49%), Gaps = 2/118 (1%) Query: 33 NEAQLAHFRRILEAWRNQLRDEVD--RTVTHMQDEAANFPDPVDRAAQEEEFSLELRNRD 90 N+ + AH+R L + +L + + V + V R + ++ + + Sbjct: 3 NDKKTAHYREELLLIQKELVEALGLAEEVGEKVELDQARFGRVSRGTALMDQAMSEASVE 62 Query: 91 RERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAEIREKQ 148 R++K + + K LK++E+ +G+C C I +RLE P +LC+DC++ E +++ Sbjct: 63 RDKKRLVAVRKALKRIEEGQYGFCLECDEPISAKRLEVAPETELCLDCQSFKEEHDRK 120 >UniRef50_C0GTL3 Transcriptional regulator, TraR/DksA family n=1 Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=C0GTL3_9DELT Length = 243 Score = 80.0 bits (196), Expect = 2e-14, Method: Composition-based stats. Identities = 25/114 (21%), Positives = 46/114 (40%) Query: 32 MNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAANFPDPVDRAAQEEEFSLELRNRDR 91 +++ A L R ++ ++ Q+ + RA + + + Sbjct: 2 LSKHSRAELYNKLFTRRMEILEKSKGLKDQWQEGNYAEKEMASRAQMDNMYRSINALDSQ 61 Query: 92 ERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAEIR 145 R + I+ L ++ ++G C+SCG EI RL+A P A C C AE + Sbjct: 62 ARSELNHIDHALDRMIIGNYGICDSCGQEISEARLQAVPWARYCRVCVNKAEEK 115 >UniRef50_Q9K9V1 BH2544 protein n=2 Tax=Bacillus RepID=Q9K9V1_BACHD Length = 220 Score = 80.0 bits (196), Expect = 2e-14, Method: Composition-based stats. Identities = 24/114 (21%), Positives = 45/114 (39%), Gaps = 12/114 (10%) Query: 35 AQLAHFRRILEAWRNQLRDEVDRT------------VTHMQDEAANFPDPVDRAAQEEEF 82 Q A R L + L + ++ + + P D A E Sbjct: 2 QQYAELRERLTERKAALEQRLKQSGELGMQEEKGTLSGSTGELSQYDNHPADTATDLYER 61 Query: 83 SLELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCI 136 ++ ++ + ++I++ L ++E+ +G CE G +I RLEA PTA + Sbjct: 62 EKDIALYEQMSREYEEIKQALDRMENGTYGICERTGEQIPYERLEANPTARTTV 115 >UniRef50_D0MD16 Transcriptional regulator, TraR/DksA family n=2 Tax=Rhodothermaceae RepID=D0MD16_RHOM4 Length = 149 Score = 79.6 bits (195), Expect = 2e-14, Method: Composition-based stats. Identities = 24/118 (20%), Positives = 52/118 (44%), Gaps = 7/118 (5%) Query: 29 EEYMNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAANFPDP-------VDRAAQEEE 81 + +L +FR+++ R Q ++++R ++D D E Sbjct: 28 RTPFTDEELEYFRQLILEKRRQAVEDIERMKAQLEDAREQGGTDTAYSFHMADAGTDAME 87 Query: 82 FSLELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCK 139 R++K I +++ L++++++ +G C+ G I RLEA P ++ I+ K Sbjct: 88 REKLFLMIARQQKYISHLDRALERIKNKTYGICKVTGKPIPRERLEAVPHTEVSIEAK 145 >UniRef50_C5CLF2 Transcriptional regulator, TraR/DksA family n=1 Tax=Variovorax paradoxus S110 RepID=C5CLF2_VARPS Length = 130 Score = 79.6 bits (195), Expect = 3e-14, Method: Composition-based stats. Identities = 30/118 (25%), Positives = 53/118 (44%), Gaps = 5/118 (4%) Query: 32 MNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAAN-----FPDPVDRAAQEEEFSLEL 86 M+ + A + R L+ +L E+ + PD VD A + +L Sbjct: 1 MDNTEKAQWNRKLDERAAELESELRAAKADEDEAPTRTPHVQVPDTVDAAEERLRGALRG 60 Query: 87 RNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAEI 144 +R+ ++ IE +++ +FG C CGV+I + RLEA P + C++C+ E Sbjct: 61 AEVERDVSELRDIEAARERLRTGEFGTCIDCGVQIPLDRLEAMPASARCLECQQRHER 118 >UniRef50_B4D2T0 Transcriptional regulator, TraR/DksA family n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D2T0_9BACT Length = 187 Score = 79.6 bits (195), Expect = 3e-14, Method: Composition-based stats. Identities = 25/104 (24%), Positives = 39/104 (37%), Gaps = 2/104 (1%) Query: 44 LEAWRNQLRDEVDRTVTHMQDEAANFPDP--VDRAAQEEEFSLELRNRDRERKLIKKIEK 101 L R+ D V T ++ N D A + ++ L+ +I Sbjct: 43 LLRERDHCIDLVSGLATTAREANPNPIQDGLADTATDLNQADESRGVLSHDQDLLVEINH 102 Query: 102 TLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAEIR 145 L K+E+ +G CE G I RL+A P A + + E R Sbjct: 103 ALSKIEEGTYGVCELTGQPIPAERLKAVPWARFTREAQAEFEAR 146 >UniRef50_A0LSA0 Transcriptional regulators, TraR/DksA family n=1 Tax=Acidothermus cellulolyticus 11B RepID=A0LSA0_ACIC1 Length = 113 Score = 79.6 bits (195), Expect = 3e-14, Method: Composition-based stats. Identities = 24/109 (22%), Positives = 46/109 (42%), Gaps = 1/109 (0%) Query: 36 QLAHFRRILEAWRNQLRDEVDRTVTHM-QDEAANFPDPVDRAAQEEEFSLELRNRDRERK 94 + RR LE +L + + E P D + + + ++ Sbjct: 2 DVQQARRQLEEMLAELDKSLATLSNQRPESEGHGTPGDADAGLDLADHARATALLEVAQE 61 Query: 95 LIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAE 143 +++ + L+++E+ +G C SCG + RLEA+P A C+ C+ E Sbjct: 62 QRRQVLEALQRIENGTYGLCVSCGAPLPEGRLEAKPEAARCLSCQAKLE 110 >UniRef50_B8GPY8 Transcriptional regulator, TraR/DksA family n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GPY8_THISH Length = 114 Score = 79.6 bits (195), Expect = 3e-14, Method: Composition-based stats. Identities = 30/107 (28%), Positives = 53/107 (49%), Gaps = 1/107 (0%) Query: 38 AHFRRILEAWRNQLRDEVDRTVTHMQDEAANFP-DPVDRAAQEEEFSLELRNRDRERKLI 96 RR LE R+ L+ +DR +++ EA D ++A Q E + + R+ + Sbjct: 6 EDLRRQLEQLRDDLQSRLDRVERNVRHEAEPLDKDFAEQAVQRENEEVVDALGNEARREL 65 Query: 97 KKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAE 143 ++ + LK++ + ++G C +CG I RL+ P A LC C + E Sbjct: 66 ARVHEALKRMNEGEYGICAACGEAIPEARLKILPQARLCAACASRQE 112 >UniRef50_C4KZG3 Transcriptional regulator, TraR/DksA family n=2 Tax=Exiguobacterium RepID=C4KZG3_EXISA Length = 183 Score = 79.6 bits (195), Expect = 3e-14, Method: Composition-based stats. Identities = 24/110 (21%), Positives = 49/110 (44%), Gaps = 2/110 (1%) Query: 30 EYMNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAANFPD--PVDRAAQEEEFSLELR 87 + + E Q+ F++ L + + +D + + D P D + + Sbjct: 2 DMLTEEQIETFKKRLLKEKAKTEGYMDSREETYDEGELSHYDNHPADSGEELFLRERDQA 61 Query: 88 NRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCID 137 + + + + ++K L +++ +G CE CG +I + RLE P A LCI+ Sbjct: 62 LNELDEEFLSDVDKALLAIQNGTYGKCEVCGKDIELDRLEVIPEATLCIE 111 >UniRef50_B7S3A6 Putative uncharacterized protein n=1 Tax=marine gamma proteobacterium HTCC2148 RepID=B7S3A6_9GAMM Length = 112 Score = 79.2 bits (194), Expect = 3e-14, Method: Composition-based stats. Identities = 31/110 (28%), Positives = 53/110 (48%), Gaps = 4/110 (3%) Query: 32 MNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAANFPDPVDRAAQE---EEFSLELRN 88 M QL FR+ L A ++ D++++ D A V R ++ + + Sbjct: 1 MKAHQLDVFRKALTARAQEI-DQLNKDSKDAADTVALDQSKVGRLSRMDAMQAQQMAQET 59 Query: 89 RDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDC 138 R ++ ++KI+ L ++ED ++GYC +CG I I RL P + CI C Sbjct: 60 ARRRQQQLQKIKSALYRLEDGNYGYCFTCGDAIDIGRLNFDPASTRCIGC 109 >UniRef50_Q2IQL4 Transcriptional regulator, TraR/DksA family n=3 Tax=Anaeromyxobacter RepID=Q2IQL4_ANADE Length = 139 Score = 79.2 bits (194), Expect = 3e-14, Method: Composition-based stats. Identities = 27/102 (26%), Positives = 47/102 (46%), Gaps = 13/102 (12%) Query: 38 AHFRRILEAWRNQLRDEVDRTVTHMQDEAANFPDPVDRAAQEEEF-SLELRNRDRERKLI 96 A R +L R L + P P D AA+ ++ S+ + R+ + Sbjct: 42 ADAREVLLRRRRSL------------SQGGAPPRPSDPAARWADYESMPAPVAEGVRREL 89 Query: 97 KKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDC 138 +I+ L++++ +G C +CG +G++RL A P A CI C Sbjct: 90 AEIDAALERIQQGRYGTCLACGGPMGLQRLRAIPEARYCIAC 131 >UniRef50_C0QW50 DNA-binding transcriptional regulator of transcription, DnaK suppressor protein n=2 Tax=Brachyspira RepID=C0QW50_BRAHW Length = 121 Score = 79.2 bits (194), Expect = 4e-14, Method: Composition-based stats. Identities = 26/104 (25%), Positives = 47/104 (45%) Query: 45 EAWRNQLRDEVDRTVTHMQDEAANFPDPVDRAAQEEEFSLELRNRDRERKLIKKIEKTLK 104 E R L + + T+ + + D VD A Q E + +E+ + + LK Sbjct: 15 EEKRKTLDELLSGNETYEALKDDSHGDMVDIAFQAYEKQNLMNFSQKEKDKLDMLNNALK 74 Query: 105 KVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAEIREKQ 148 ++E+ +G C C EI RL A P C++C + E ++++ Sbjct: 75 RIEEGTYGKCIDCKEEINEERLTALPYTLRCVNCMSKYEDKKRR 118 >UniRef50_B0VG86 Putative uncharacterized protein n=1 Tax=Candidatus Cloacamonas acidaminovorans RepID=B0VG86_9BACT Length = 148 Score = 79.2 bits (194), Expect = 4e-14, Method: Composition-based stats. Identities = 29/145 (20%), Positives = 58/145 (40%), Gaps = 6/145 (4%) Query: 6 NRKTSSLSILAIAGVEPYQEKPGEEYMNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDE 65 R + +A + P + K EE + A+ + E + Sbjct: 7 KRAKPKENKMATKKLPPEKLKHYEEVIRAELEESI-----AYIESINKEQSLGARESSGD 61 Query: 66 AANFP-DPVDRAAQEEEFSLELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIR 124 +++ D+ + + + ER+ I+++ + L+++ D +G CE CG I Sbjct: 62 LSSYAFHQADQGSDTNLMEQSVMMLESEREKIRQLNEALQRISDGTYGICEFCGEFIQEN 121 Query: 125 RLEARPTADLCIDCKTLAEIREKQM 149 RLE P A C+ CK E ++++ Sbjct: 122 RLEIIPYATCCVACKEKNEDKKRRQ 146 >UniRef50_A1B0I3 Transcriptional regulator, TraR/DksA family n=9 Tax=Rhodobacterales RepID=A1B0I3_PARDP Length = 106 Score = 79.2 bits (194), Expect = 4e-14, Method: Composition-based stats. Identities = 23/98 (23%), Positives = 43/98 (43%), Gaps = 2/98 (2%) Query: 41 RRILEAWRNQLRDEVDRTVTHMQDEAANFPDPVDRAAQEEEFSLELRNRDRERKLIKKIE 100 + +L A R L ++ + D D D A ++E+ + + + +I+ Sbjct: 7 KALLTARRQALLVDLANIRDQLDDPLPQDWD--DAAIEQEDDEVLQALGHAHQAELNRID 64 Query: 101 KTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDC 138 L++++ D+G+C CG I RL+ P LC C Sbjct: 65 AALRRIDSGDYGFCAGCGDVILPARLDLLPDTPLCAHC 102 >UniRef50_Q6MGP9 DksA protein n=1 Tax=Bdellovibrio bacteriovorus RepID=Q6MGP9_BDEBA Length = 126 Score = 78.8 bits (193), Expect = 5e-14, Method: Composition-based stats. Identities = 30/106 (28%), Positives = 50/106 (47%), Gaps = 1/106 (0%) Query: 38 AHFRRILEAWRNQLRDEVDRTVTHMQDEAANFPDPVDRAAQEEEFSLELRNRDRERKLIK 97 + + L ++ + ++ Q A D + A+Q+ ++ + +R+R + Sbjct: 15 QNLKESLLFQKSTILNKSHE-FKEEQSSMAAVADEAEAASQDISNNISIHLHERDRTALY 73 Query: 98 KIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAE 143 IE+ L K+ D +G CESC I RRL+ RP LCIDC E Sbjct: 74 AIERALGKIADGTYGQCESCSEIINARRLQVRPFTALCIDCMEEQE 119 >UniRef50_A6C001 Probable DnaK suppressor protein n=1 Tax=Planctomyces maris DSM 8797 RepID=A6C001_9PLAN Length = 141 Score = 78.5 bits (192), Expect = 6e-14, Method: Composition-based stats. Identities = 28/104 (26%), Positives = 48/104 (46%) Query: 40 FRRILEAWRNQLRDEVDRTVTHMQDEAANFPDPVDRAAQEEEFSLELRNRDRERKLIKKI 99 + L R++L+ V + ++ D D A +E LE + E K + +I Sbjct: 1 MHKQLLNRRDELKKLVSDSSEGSSGSQSSVEDSGDAAIRERRQDLESHLAEIEYKELMQI 60 Query: 100 EKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAE 143 + + +++ +G+CESC I I RL+A P A C+ C E Sbjct: 61 RRAISLIQEGRYGHCESCNKNIPIARLKAVPYAMFCVSCAEQRE 104 >UniRef50_Q2SPR7 DnaK suppressor protein n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SPR7_HAHCH Length = 107 Score = 78.1 bits (191), Expect = 7e-14, Method: Composition-based stats. Identities = 24/108 (22%), Positives = 52/108 (48%), Gaps = 2/108 (1%) Query: 36 QLAHFRRILEAWRNQLRDEVDRTVTHMQDEAANFPDPVDRAAQEEEFSLELRNRDRERKL 95 Q +H + L + L ++ + E + D ++A + E + + Sbjct: 2 QQSHIKNRLSEHLSVLITRLEDITRDLTSEHS--ADSAEQAQERENDDVLNALKVETEIE 59 Query: 96 IKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAE 143 I +++K L++++ ++G C +CG +I RL+ P A+LC+ C + +E Sbjct: 60 INQVKKALQRLQQGEYGVCVACGEDIPESRLQVLPFAELCVSCASKSE 107 >UniRef50_A3JJC9 Putative uncharacterized protein n=1 Tax=Marinobacter sp. ELB17 RepID=A3JJC9_9ALTE Length = 111 Score = 78.1 bits (191), Expect = 8e-14, Method: Composition-based stats. Identities = 28/112 (25%), Positives = 50/112 (44%), Gaps = 8/112 (7%) Query: 32 MNEAQLAHFRRILEAWRNQLR-----DEVDRTVTHMQDEAANFPDPVDRAAQEEEFSLEL 86 M L FR +L A R+ L + H+ ++ +D + +L Sbjct: 1 MATENLEKFRILLLAQRDDLLPTSEVRDESSATVHLDQQSVGRLSRMD---ALQSQALAQ 57 Query: 87 RNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDC 138 + R + ++ IE L +++++++G C CG I +RLE PT+ CI C Sbjct: 58 AGKVRADRQLRLIEAALLRIDNDEYGDCRECGEPINPKRLEVDPTSLYCIHC 109 >UniRef50_B1KG10 Transcriptional regulator, TraR/DksA family n=1 Tax=Shewanella woodyi ATCC 51908 RepID=B1KG10_SHEWM Length = 115 Score = 78.1 bits (191), Expect = 8e-14, Method: Composition-based stats. Identities = 23/106 (21%), Positives = 49/106 (46%), Gaps = 1/106 (0%) Query: 32 MNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAA-NFPDPVDRAAQEEEFSLELRNRD 90 +++ QLA +++L ++ +D+ + + + D VD A+Q + Sbjct: 9 LSDEQLAFLQKLLNDELRKVNGNIDQLEAQTEATSKCSHLDAVDLASQIAAQRAAHSVLE 68 Query: 91 RERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCI 136 +R+ + +IE+ + +++ +G CE G IG RL P A + Sbjct: 69 SQRQQLSEIERAMARLKVGTYGLCEQTGEPIGFERLAVLPWARHTV 114 >UniRef50_Q2NBT1 Putative uncharacterized protein n=1 Tax=Erythrobacter litoralis HTCC2594 RepID=Q2NBT1_ERYLH Length = 104 Score = 78.1 bits (191), Expect = 9e-14, Method: Composition-based stats. Identities = 26/104 (25%), Positives = 43/104 (41%), Gaps = 2/104 (1%) Query: 35 AQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAANFPDPVDRAAQEEEFSLELRNRDRERK 94 ++ FR L+ L + + ++ D ++A + D R Sbjct: 2 SEFDGFRPQLQERLADLLERANVIEDDLRGPL--DADSSEQAVDLADDEALEGVDDVLRA 59 Query: 95 LIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDC 138 I+++ L ++E+ +G C CG I RLEARP A CI C Sbjct: 60 EIQQVRYALARIENGSYGTCAKCGEPIPKERLEARPIATRCIKC 103 >UniRef50_B9XD69 Transcriptional regulator, TraR/DksA family n=1 Tax=bacterium Ellin514 RepID=B9XD69_9BACT Length = 184 Score = 77.7 bits (190), Expect = 1e-13, Method: Composition-based stats. Identities = 19/111 (17%), Positives = 38/111 (34%), Gaps = 6/111 (5%) Query: 35 AQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAANFPDPVDRAAQEEEFSLELRNRDRERK 94 A L R ++ L + + + D + L ++ Sbjct: 46 AHLTELREHFLNKKDNLSKDANEETPSYSEHM------ADAGTDTYDRDFALSMLSADQS 99 Query: 95 LIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAEIR 145 + +IE+ ++++E +G CE G I RL A P ++ + E Sbjct: 100 AVYEIEQAIQRIESNTYGICEMTGKPIQSERLNAIPWTRFSVEAERELERN 150 >UniRef50_A1ATM0 Transcriptional regulator, TraR/DksA family n=1 Tax=Pelobacter propionicus DSM 2379 RepID=A1ATM0_PELPD Length = 145 Score = 77.7 bits (190), Expect = 1e-13, Method: Composition-based stats. Identities = 33/109 (30%), Positives = 55/109 (50%), Gaps = 3/109 (2%) Query: 43 ILEAWRNQLRDEVDRTVTHMQD---EAANFPDPVDRAAQEEEFSLELRNRDRERKLIKKI 99 IL ++ E+ +T+ D D D+A+ E + L L DRER+ + I Sbjct: 15 ILHKMKDDTLREIQKTLKSGTDILTINEPSGDIYDQASSERDRELGLLLGDREREKLHAI 74 Query: 100 EKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAEIREKQ 148 ++ L ++ + ++G CE C EI + RL+A P A C+ CK+ E + Q Sbjct: 75 DEALLRIREGEYGICEECEEEIPLGRLKALPFARHCVRCKSDLEKLQAQ 123 >UniRef50_A0AZX7 Transcriptional regulators, TraR/DksA family n=38 Tax=Burkholderia RepID=A0AZX7_BURCH Length = 130 Score = 77.7 bits (190), Expect = 1e-13, Method: Composition-based stats. Identities = 29/119 (24%), Positives = 50/119 (42%), Gaps = 5/119 (4%) Query: 32 MNEAQLAHFRRILEAWRNQLRDEV-----DRTVTHMQDEAANFPDPVDRAAQEEEFSLEL 86 ++ Q ++ L LR E+ R + A PD D A + ++ Sbjct: 3 LDPQQRQTLKQRLNESEQTLRAEIRTSEDQRASESYAELAGAAPDEGDEANADLFVDVDH 62 Query: 87 RNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAEIR 145 + ++ I + +++ D +G C C +G RL ARPTA+ C C++L E R Sbjct: 63 ALIGMKLTELRAIGRAQQRMRDGSYGECIDCDGSVGYERLLARPTAERCTHCQSLYERR 121 >UniRef50_D1ACI4 Transcriptional regulator, TraR/DksA family n=2 Tax=Streptosporangineae RepID=D1ACI4_THECD Length = 121 Score = 77.3 bits (189), Expect = 1e-13, Method: Composition-based stats. Identities = 28/117 (23%), Positives = 42/117 (35%), Gaps = 2/117 (1%) Query: 33 NEAQLAHFRRILEAWRNQLRDEVD--RTVTHMQDEAANFPDPVDRAAQEEEFSLELRNRD 90 A RR LE L + R A P D A + + Sbjct: 5 TAVDTAAARRRLEVMLADLDRSMALLRGERTAVAGARLEAHPADVGAHLSDAEQADAALE 64 Query: 91 RERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAEIREK 147 R R+ + L+++ +G C +CG I RLEARP A C+ C+ + + Sbjct: 65 RLRRQRNSVLAALQRIAAGTYGRCVTCGKPIAAGRLEARPDAARCLTCQARYDRARR 121 >UniRef50_C3KFN9 Putative uncharacterized protein n=8 Tax=Bacteria RepID=C3KFN9_PSEFL Length = 119 Score = 76.5 bits (187), Expect = 2e-13, Method: Composition-based stats. Identities = 29/118 (24%), Positives = 54/118 (45%), Gaps = 5/118 (4%) Query: 30 EYMNEA-QLAHFRRILEAWRNQLRDEVDRTVTHMQDEAANFPDPVDRAAQE---EEFSLE 85 M++A LAHF+ +LE +L ++ + Q V R ++ ++ ++ Sbjct: 1 MAMDDALNLAHFKTLLEQRAAELDRLLEDAESRSQ-SVELDQSKVGRLSRMDALQQQAMN 59 Query: 86 LRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAE 143 R R + ++++ LK+ ++G+C CG I + RL P LCI C + E Sbjct: 60 DAIRGRAQHERVRLQQALKRWHKGEYGWCNQCGALIALGRLVFDPATPLCITCASRVE 117 >UniRef50_P80872 General stress protein 16O n=2 Tax=Bacillus subtilis group RepID=G16O_BACSU Length = 163 Score = 76.5 bits (187), Expect = 2e-13, Method: Composition-based stats. Identities = 25/118 (21%), Positives = 51/118 (43%), Gaps = 4/118 (3%) Query: 30 EYMNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQD----EAANFPDPVDRAAQEEEFSLE 85 + + Q H L + +L E T + ++ D + + Sbjct: 1 MALTKEQTQHLYHKLLDMQKELSGEKKETESMTEEVGELSNGVDNHMADHGTLVTDRMTD 60 Query: 86 LRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAE 143 ++ +R+L++++ + L+K++D +G CE G EI RLEA P A + ++ + E Sbjct: 61 QTVKEIDRELLEEVNRALQKMKDGTYGVCEKTGQEIPYERLEAVPYARMTVEAQADVE 118 >UniRef50_UPI00016C3CE0 transcriptional regulators, TraR/DksA family protein n=1 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C3CE0 Length = 253 Score = 76.5 bits (187), Expect = 2e-13, Method: Composition-based stats. Identities = 31/125 (24%), Positives = 50/125 (40%), Gaps = 17/125 (13%) Query: 32 MNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDE------------AANFP-DPVDRAAQ 78 MN + ++R LE + D V RT +++E +N P D Sbjct: 1 MNSRKTNQYKRQLEK----IADRVGRTAAALEEEVRMPLGGESAGGMSNAPLHLGDLGTH 56 Query: 79 EEEFSLELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDC 138 L+ + E L + L +++D FG C SCG ++G RL+A P C+ C Sbjct: 57 AFSQELDTTLLENETYLRDEAVAALGRIDDGTFGRCTSCGGDVGEERLDALPYVRQCVAC 116 Query: 139 KTLAE 143 + Sbjct: 117 AQAEQ 121 >UniRef50_Q473A0 Zn-finger, prokaryotic DksA/TraR C4 type n=3 Tax=Cupriavidus RepID=Q473A0_RALEJ Length = 124 Score = 76.5 bits (187), Expect = 3e-13, Method: Composition-based stats. Identities = 28/114 (24%), Positives = 45/114 (39%), Gaps = 1/114 (0%) Query: 32 MNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAANFP-DPVDRAAQEEEFSLELRNRD 90 + +LA L+A ++RD V + + D D A +E + Sbjct: 4 LTTQELAALAVQLDASEARIRDAVGTAASPLAGPMQREARDDADLAEEEVVQRQADAMLE 63 Query: 91 RERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAEI 144 R + I ++++ +G C CG I RL+A PTA C DC+ E Sbjct: 64 HYRTELADIRAARERMKAGQYGTCTDCGEAIPYSRLQAYPTARRCADCQRGHER 117 >UniRef50_A6U730 Transcriptional regulator, TraR/DksA family n=4 Tax=Rhizobiaceae RepID=A6U730_SINMW Length = 114 Score = 76.5 bits (187), Expect = 3e-13, Method: Composition-based stats. Identities = 28/107 (26%), Positives = 43/107 (40%), Gaps = 2/107 (1%) Query: 32 MNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAANFPDPVDRAAQEEEFSLELRNRDR 91 M++ L FR L + +L + + ++ D DR + E + Sbjct: 1 MDKYALDDFREQLLRRKRELYGRLVKIEEDLEQPMN--ADVPDRVTERESDEVLEGLGLA 58 Query: 92 ERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDC 138 + I+ I+ L ++E FG C CG I RL A P A LC C Sbjct: 59 GQGEIRAIDAALNRIEAGTFGICARCGDAISPERLRAVPHAPLCQTC 105 >UniRef50_C6E710 Transcriptional regulator, TraR/DksA family n=3 Tax=Geobacter RepID=C6E710_GEOSM Length = 130 Score = 75.8 bits (185), Expect = 4e-13, Method: Composition-based stats. Identities = 28/110 (25%), Positives = 49/110 (44%), Gaps = 5/110 (4%) Query: 39 HFRRILEAWRNQLRDEV-----DRTVTHMQDEAANFPDPVDRAAQEEEFSLELRNRDRER 93 FR +L + +L E+ RT + + + D +++ + L D R Sbjct: 11 EFRNLLAEQKRRLWAELREEIFSRTGSDLATQYDIPQDLGEKSILDMLSDAGLAIADIRR 70 Query: 94 KLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAE 143 + +E+ ++VE +G CE+CG I I+RL P A C+ C+ E Sbjct: 71 NQLTALEEAQRRVEQGTYGKCENCGEVIDIQRLRLMPFAAYCVSCQKEKE 120 >UniRef50_C1SL78 DnaK suppressor protein n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SL78_9BACT Length = 144 Score = 75.8 bits (185), Expect = 4e-13, Method: Composition-based stats. Identities = 29/115 (25%), Positives = 51/115 (44%), Gaps = 1/115 (0%) Query: 32 MNEAQLAHFRRILEAWRNQLRDEV-DRTVTHMQDEAANFPDPVDRAAQEEEFSLELRNRD 90 M + ++ + R L R L ++ DR M D D A +L L + Sbjct: 25 MEKEKMIYHRERLLEMRRDLIQKLNDRYNDAMGLGGDGSQDSADEAYNLYNKNLMLGRVE 84 Query: 91 RERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAEIR 145 + ++ +E+ L++++ +G C C +I +RLE P A C +CKT E + Sbjct: 85 TDALKLRLVEQALQRIDAGSYGVCIECEEDIEEKRLEYVPFARYCTECKTELEKK 139 >UniRef50_Q8ENZ4 Putative uncharacterized protein OB2328 n=1 Tax=Oceanobacillus iheyensis RepID=Q8ENZ4_OCEIH Length = 116 Score = 75.8 bits (185), Expect = 4e-13, Method: Composition-based stats. Identities = 30/107 (28%), Positives = 53/107 (49%), Gaps = 3/107 (2%) Query: 32 MNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAANFPD-PVDRAAQEEEFSLELRNRD 90 +++ +L +F+ L+ + +L D+ R + DE A++ + P D ++ E + Sbjct: 5 LSKDKLNYFKEKLQQMKEELEDK--RNINSNSDELADYDNHPADMGTEQFEQQRDAGLNL 62 Query: 91 RERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCID 137 +K+IE L+K+ED +G E G I RLE PTA L + Sbjct: 63 MRENQLKEIEDALQKIEDGTYGISEKSGEPIPEERLEVLPTARLLVS 109 >UniRef50_B6R7R7 Transcriptional regulator, TraR/DksA family n=1 Tax=Pseudovibrio sp. JE062 RepID=B6R7R7_9RHOB Length = 118 Score = 75.4 bits (184), Expect = 5e-13, Method: Composition-based stats. Identities = 30/119 (25%), Positives = 56/119 (47%), Gaps = 9/119 (7%) Query: 28 GEEYMNEAQLAHFRRILEAWRNQLRD-----EVDRTVTHMQDEAANFPDPVDRAAQEEEF 82 G++ M L R +L A + +L + E DR + ++ +D ++ Sbjct: 2 GDDLMTLT-LNEARDLLLARKAELTELTEISEGDRATVTLDQQSVGRLSRMDAMQRQAMA 60 Query: 83 SLELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTL 141 R R RE +++I+ L+++++E++G+C CG +I RL P A C+ C L Sbjct: 61 QANDRQRARE---LQRIDGALQRIKEEEYGFCLECGEDIPEARLRVDPAALYCVSCAKL 116 >UniRef50_Q7MQQ3 Putative uncharacterized protein n=1 Tax=Wolinella succinogenes RepID=Q7MQQ3_WOLSU Length = 113 Score = 75.4 bits (184), Expect = 5e-13, Method: Composition-based stats. Identities = 24/108 (22%), Positives = 49/108 (45%), Gaps = 1/108 (0%) Query: 32 MNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEA-ANFPDPVDRAAQEEEFSLELRNRD 90 M + Q + + + A +R+++ + + + +D + +++ R Sbjct: 1 MTKKQRSELKLKIIAEIESVRNDIQHLKEENNPISLMSVSEKMDALESLADQNIQKRLLL 60 Query: 91 RERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDC 138 +KK+E L +++ DFG C+ C I +RL A P A +C+DC Sbjct: 61 DLEARLKKLEYALTRIDSPDFGICQICDEPIPYKRLFALPEATICVDC 108 >UniRef50_D2MJ83 Transcriptional regulator, TraR/DksA family n=1 Tax=Candidatus Poribacteria sp. WGA-A3 RepID=D2MJ83_9BACT Length = 123 Score = 75.4 bits (184), Expect = 5e-13, Method: Composition-based stats. Identities = 28/113 (24%), Positives = 52/113 (46%), Gaps = 5/113 (4%) Query: 40 FRRILEAWRNQLRDEVD-----RTVTHMQDEAANFPDPVDRAAQEEEFSLELRNRDRERK 94 R+I+ R +L E+ Q + D D+A + E + + +++ + Sbjct: 3 LRKIMLEKRVKLMKEIQDQLGQSLTEEQQRRFESAMDSGDQALLDLEREMGISLQEKRNR 62 Query: 95 LIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAEIREK 147 + I++ L +E+ +G C C EI +RL P A LC++C+ E+ EK Sbjct: 63 ERQMIDEALVSLEEGTYGICVECNTEISEKRLAVMPFARLCVECQEKIELLEK 115 >UniRef50_A5WFD1 Transcriptional regulator, TraR/DksA family n=3 Tax=Moraxellaceae RepID=A5WFD1_PSYWF Length = 109 Score = 75.4 bits (184), Expect = 6e-13, Method: Composition-based stats. Identities = 22/93 (23%), Positives = 44/93 (47%), Gaps = 2/93 (2%) Query: 44 LEAWRNQLRDEVDRTVTHMQDEAANFPDPVDRAAQEEEFSLELRNRDRERKLIKKIEKTL 103 L+ D+++ + + QD+ + D D+A E + ++ + + L Sbjct: 15 LQQEYQNRIDKIEDHIHNPQDDLNSHWD--DQAISMRENEMRKTLLVEAQQSLTYVNNAL 72 Query: 104 KKVEDEDFGYCESCGVEIGIRRLEARPTADLCI 136 ++++ +G C CG +I +RLEA P A LC+ Sbjct: 73 SRIDNGTYGECTVCGEDIEDKRLEAVPYATLCM 105 >UniRef50_UPI00019074B1 putative DnaK suppressor protein n=1 Tax=Rhizobium etli GR56 RepID=UPI00019074B1 Length = 128 Score = 75.0 bits (183), Expect = 7e-13, Method: Composition-based stats. Identities = 28/115 (24%), Positives = 45/115 (39%), Gaps = 2/115 (1%) Query: 32 MNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAANFPDPVDRAAQEEEFSLELRNRDR 91 M + L+ + L+ + + A PD DR Q E + + R Sbjct: 14 MRSMKHEDLEDKLKTAKADLQRRMSAIDADL--GTALDPDSEDRVTQLENDQVLMEMRRE 71 Query: 92 ERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAEIRE 146 I+ I+ L++++ FG C +C I RL+A P C C LA+ R Sbjct: 72 AGAQIQLIDAALERLKHGTFGRCVTCLAPIETARLDAIPYTPYCATCARLADERR 126 >UniRef50_Q12E87 Transcriptional regulators, TraR/DksA family n=1 Tax=Polaromonas sp. JS666 RepID=Q12E87_POLSJ Length = 134 Score = 74.6 bits (182), Expect = 8e-13, Method: Composition-based stats. Identities = 31/126 (24%), Positives = 55/126 (43%), Gaps = 12/126 (9%) Query: 33 NEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAA-----NFPDPVDRAAQEEEFSLELR 87 + +Q FR +L +LR V R + DEAA + D D A ++ ++ Sbjct: 5 DSSQAPRFRLLLTQREAELRA-VLRAAGSLSDEAAESESHDVTDFKDVATEQSLATVADA 63 Query: 88 NRDRERKLIKKIEKTLKKVEDED------FGYCESCGVEIGIRRLEARPTADLCIDCKTL 141 D ++++ L++++D +G+C CG I +RRL A P C C+ + Sbjct: 64 KVDHAAHELEQVLAALRRLDDATNGKSPGYGHCLDCGEAIDLRRLAALPATPYCTACQAI 123 Query: 142 AEIREK 147 E + Sbjct: 124 HEHERQ 129 >UniRef50_D0D572 Transcriptional regulator, TraR/DksA family n=1 Tax=Citreicella sp. SE45 RepID=D0D572_9RHOB Length = 130 Score = 74.6 bits (182), Expect = 8e-13, Method: Composition-based stats. Identities = 22/102 (21%), Positives = 44/102 (43%), Gaps = 2/102 (1%) Query: 37 LAHFRRILEAWRNQLRDEVDRTVTHMQDEAANFPDPVDRAAQEEEFSLELRNRDRERKLI 96 + +L +L+ ++ + + + D A + E + + I Sbjct: 25 HDKHKAMLLKRLEELKTRLEGIEDSLDEPKPSDWDES--ATEREGDEVLESLGTSGQAEI 82 Query: 97 KKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDC 138 +IE L+++++ ++GYC +CG I RL+ P A LC C Sbjct: 83 GRIEAALRRMDEGEYGYCLTCGEAISEARLDILPDAPLCAAC 124 >UniRef50_UPI00016C4B65 DnaK suppressor protein DksA n=1 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C4B65 Length = 95 Score = 74.2 bits (181), Expect = 1e-12, Method: Composition-based stats. Identities = 18/57 (31%), Positives = 33/57 (57%) Query: 88 NRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAEI 144 + E K + +IE+ L++++ +G CE C ++I + RL A P + C+DC+ E Sbjct: 1 MAELEAKELAQIERALRRLKAGTYGKCEVCSIKIPVARLNALPFSTFCVDCQREMER 57 >UniRef50_Q3JAV6 Putative uncharacterized protein n=2 Tax=Nitrosococcus oceani RepID=Q3JAV6_NITOC Length = 132 Score = 73.8 bits (180), Expect = 1e-12, Method: Composition-based stats. Identities = 27/124 (21%), Positives = 58/124 (46%), Gaps = 5/124 (4%) Query: 32 MNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDE-----AANFPDPVDRAAQEEEFSLEL 86 +++ Q F++ L+ +++ ++V + + ++ A D D + + ++L Sbjct: 5 LSDQQRREFKQQLQQRFDEVSEKVRQELRESDNQSYIELAGRVHDREDASLADLLIDIDL 64 Query: 87 RNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAEIRE 146 D + I+ IE+ L + ++G C C +I +RL+ PT C DC+T E Sbjct: 65 AIVDLHIEEIRNIEQALMRFPKGNYGICIDCNTDIDYQRLQINPTVKRCFDCQTRHERTH 124 Query: 147 KQMA 150 ++ A Sbjct: 125 REKA 128 >UniRef50_B2UIX3 Transcriptional regulator, TraR/DksA family n=6 Tax=Ralstonia RepID=B2UIX3_RALPJ Length = 120 Score = 73.8 bits (180), Expect = 2e-12, Method: Composition-based stats. Identities = 28/115 (24%), Positives = 49/115 (42%), Gaps = 1/115 (0%) Query: 32 MNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAANFP-DPVDRAAQEEEFSLELRNRD 90 EAQ R +L+ ++R ++ P + D A +E Sbjct: 4 FTEAQWKRLRSLLDEQEARVRRQLSALGPTTVPVPREAPFENADLADEEVGEQTNDVMLV 63 Query: 91 RERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAEIR 145 R R ++++ ++++ +G C CG I RL+A+PTA C+ C+T E R Sbjct: 64 RYRSELEQLNAARERMQQHSYGICVDCGEAIPFLRLQAQPTAMRCLPCQTACERR 118 >UniRef50_Q1MI46 Putative dnaK suppressor protein n=2 Tax=Rhizobium RepID=Q1MI46_RHIL3 Length = 107 Score = 73.4 bits (179), Expect = 2e-12, Method: Composition-based stats. Identities = 26/107 (24%), Positives = 44/107 (41%), Gaps = 5/107 (4%) Query: 32 MNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAANFPDPVDRAAQEEEFSLELRNRDR 91 MN++ + +L+ ++ L + + A D +RA Q E + + Sbjct: 1 MNKS---SVQTVLQTMKDDLARRLGAIGADLS--VALEKDSEERATQVENDEVLREMQAE 55 Query: 92 ERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDC 138 I I+ + ++ D+ +G C C IG RL A P CIDC Sbjct: 56 GHNQIAAIDAAIGRLNDDTYGKCVKCHNRIGKERLTAVPYTPFCIDC 102 >UniRef50_A8FE57 General stress protein n=2 Tax=Bacillus pumilus RepID=A8FE57_BACP2 Length = 135 Score = 73.4 bits (179), Expect = 2e-12, Method: Composition-based stats. Identities = 22/74 (29%), Positives = 33/74 (44%) Query: 73 VDRAAQEEEFSLELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTA 132 D + + E + +L +I+ LK++ED +G CE G EI RL+A P Sbjct: 17 ADHGSIYLDRMTEQTLDQVDDQLEAEIDAALKRMEDGTYGICEKTGKEIPYERLKAVPYT 76 Query: 133 DLCIDCKTLAEIRE 146 ID K E + Sbjct: 77 RYSIDAKKNEETTQ 90 >UniRef50_A1DZZ7 DnaK suppressor protein n=1 Tax=Halobacillus halophilus RepID=A1DZZ7_SPOHA Length = 227 Score = 73.4 bits (179), Expect = 2e-12, Method: Composition-based stats. Identities = 23/124 (18%), Positives = 48/124 (38%), Gaps = 11/124 (8%) Query: 36 QLAHFRRILEAWRNQLRDEVDRTVT-----------HMQDEAANFPDPVDRAAQEEEFSL 84 H+++ LE + ++ + + + + P D ++ E Sbjct: 2 DYEHYKKQLEERQMEIETRLLEKNSLGIERGFASDMASGELSQYDNHPADSGSELYEREK 61 Query: 85 ELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAEI 144 ++ ++ + IE +L +++ +G CE G I RLEA PTA T E+ Sbjct: 62 DIALLGHLKEELSDIEYSLNQMKAGKYGICEKTGKPIPNERLEAFPTARTVSQASTNQEM 121 Query: 145 REKQ 148 + + Sbjct: 122 SKDR 125 >UniRef50_D1AEE3 Transcriptional regulator, TraR/DksA family n=1 Tax=Thermomonospora curvata DSM 43183 RepID=D1AEE3_THECD Length = 114 Score = 73.4 bits (179), Expect = 2e-12, Method: Composition-based stats. Identities = 20/63 (31%), Positives = 29/63 (46%) Query: 83 SLELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLA 142 L D R+ ++ IE+ L ++ +G CE CG I RLE P A C+ C+ Sbjct: 51 DTALVQADALRQTLEDIEEALLRLRQGRYGLCEKCGKPIPEGRLEILPYARCCVSCQQRR 110 Query: 143 EIR 145 R Sbjct: 111 RGR 113 >UniRef50_C5C3L5 Transcriptional regulator, TraR/DksA family n=1 Tax=Beutenbergia cavernae DSM 12333 RepID=C5C3L5_BEUC1 Length = 111 Score = 73.4 bits (179), Expect = 2e-12, Method: Composition-based stats. Identities = 24/102 (23%), Positives = 37/102 (36%) Query: 37 LAHFRRILEAWRNQLRDEVDRTVTHMQDEAANFPDPVDRAAQEEEFSLELRNRDRERKLI 96 L R LE LR + A+ + + + + Sbjct: 9 LTERRAALEERLRALRATRGEIIAASASSNADDEHDPEGSTIAYDRAQVGALIASAEHER 68 Query: 97 KKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDC 138 ++++ L ++ED G CE CG I RLE RP A C+ C Sbjct: 69 EELDAALARIEDGTHGVCERCGRPIPAARLEVRPAARTCVGC 110 >UniRef50_A8V318 Putative uncharacterized protein n=1 Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8V318_9AQUI Length = 133 Score = 72.7 bits (177), Expect = 3e-12, Method: Composition-based stats. Identities = 30/92 (32%), Positives = 47/92 (51%), Gaps = 1/92 (1%) Query: 54 EVDRTVTHMQDEAANFP-DPVDRAAQEEEFSLELRNRDRERKLIKKIEKTLKKVEDEDFG 112 + + T+ +Q+E N P D D A L + E +++KKI++ L+++ + +G Sbjct: 7 QQENTLKRLQEEGLNIPQDREDYARITNYEFLLDELEEIEVEILKKIDEALERISEGTYG 66 Query: 113 YCESCGVEIGIRRLEARPTADLCIDCKTLAEI 144 YCE CG I RLEA P LC + AE Sbjct: 67 YCEVCGKPIEEERLEAIPWTTLCTEHAKEAEK 98 >UniRef50_Q2K1F6 Putative DnaK suppressor protein n=1 Tax=Rhizobium etli CFN 42 RepID=Q2K1F6_RHIEC Length = 106 Score = 72.7 bits (177), Expect = 3e-12, Method: Composition-based stats. Identities = 27/105 (25%), Positives = 39/105 (37%), Gaps = 2/105 (1%) Query: 38 AHFRRILEAWRNQLRDEVDRTVTHMQDEAANFPDPVDRAAQEEEFSLELRNRDRERKLIK 97 L+ R L+ V + + DR Q E + + R R+ I Sbjct: 3 EKMENRLKTLRADLQRRVSAIDADLAAALDPDSE--DRVTQLENDQVLMEMRKEAREQII 60 Query: 98 KIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLA 142 I+ L+++ FG C C I RLEA P C+ C LA Sbjct: 61 SIDAALERLNHGSFGRCVRCLDPIDPGRLEAIPYTPYCVTCARLA 105 >UniRef50_Q2GBE3 Transcriptional regulator, TraR/DksA family n=3 Tax=Alphaproteobacteria RepID=Q2GBE3_NOVAD Length = 104 Score = 72.7 bits (177), Expect = 3e-12, Method: Composition-based stats. Identities = 29/103 (28%), Positives = 50/103 (48%), Gaps = 2/103 (1%) Query: 41 RRILEAWRNQLRDEVDRTVTHMQDEAANFPDPVDRAAQEEEFSLELRNRDRERKLIKKIE 100 + LEA +L+ ++R + + D ++A + E+ + R+ I ++ Sbjct: 4 KARLEAQMAELQARLERIEQDLAEPLN--ADSSEQAVEVEDDASLESQALLLRRQIASVD 61 Query: 101 KTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAE 143 + L+++ +G C CG EI RLEARP A LCIDC + Sbjct: 62 RALERIAAGTYGECIRCGGEIAPARLEARPEAALCIDCARQEQ 104 >UniRef50_Q6MHM2 DnaK deletion suppressor protein n=2 Tax=Bdellovibrio bacteriovorus RepID=Q6MHM2_BDEBA Length = 135 Score = 72.7 bits (177), Expect = 3e-12, Method: Composition-based stats. Identities = 29/126 (23%), Positives = 48/126 (38%) Query: 25 EKPGEEYMNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAANFPDPVDRAAQEEEFSL 84 + G ++E + R L + + + V ++ D D+ + Sbjct: 8 TRGGNMAISEKLVTECRAKLLQSKQDILNRVKEARLNLDQNEEKGGDEGDQTVRVLAEQE 67 Query: 85 ELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAEI 144 L +R R + +IE L ++E FGYCE I RL A P L I+ + E Sbjct: 68 FLSMHERMRGQLMEIESALARIEGGTFGYCEETEEAIEPERLRAIPWTRLSIEGAEIRES 127 Query: 145 REKQMA 150 K+ A Sbjct: 128 MNKRYA 133 >UniRef50_A4F8B9 Possible suppressor protein DnaK n=6 Tax=Actinomycetales RepID=A4F8B9_SACEN Length = 125 Score = 72.7 bits (177), Expect = 4e-12, Method: Composition-based stats. Identities = 25/121 (20%), Positives = 41/121 (33%), Gaps = 7/121 (5%) Query: 27 PGEEYMNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAA-----NFPDPVDR--AAQE 79 + R++L R + H+ D D A Sbjct: 2 SDRKPQARLDAKTARKLLAEERAGATARISSLQRHLSSIREVSTWTGTDDEHDPEGATIA 61 Query: 80 EEFSLELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCK 139 E + R+ ++ +++ +++D +G CE CG I RLEA P CI C Sbjct: 62 YERAQVQGLLADARRDLEALDRAAARLDDGTYGLCERCGSPIAPERLEALPATTTCIACA 121 Query: 140 T 140 T Sbjct: 122 T 122 >UniRef50_A6QA93 Putative uncharacterized protein n=1 Tax=Sulfurovum sp. NBC37-1 RepID=A6QA93_SULNB Length = 116 Score = 72.7 bits (177), Expect = 4e-12, Method: Composition-based stats. Identities = 26/104 (25%), Positives = 47/104 (45%), Gaps = 2/104 (1%) Query: 33 NEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAANFP--DPVDRAAQEEEFSLELRNRD 90 N+ L F IL+ QL + + + + + ++ D D A+ + S + Sbjct: 5 NDLDLDRFENILKEREAQLEENIAQLKSELDIVGSDDGINDVEDLASLKNISSKDNTLLK 64 Query: 91 RERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADL 134 R+ +K+ + L K+++ +G CE G I + RLEA P A Sbjct: 65 RQEDELKETQHALTKIKNGTYGICEKTGKSIPVERLEANPIARY 108 >UniRef50_A6FZV7 Transcriptional regulator, TraR/DksA family protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6FZV7_9DELT Length = 130 Score = 72.3 bits (176), Expect = 4e-12, Method: Composition-based stats. Identities = 32/119 (26%), Positives = 56/119 (47%), Gaps = 4/119 (3%) Query: 32 MNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAANFPDPVDRAAQEEEFSLELRNRDR 91 M+ A A R L + R++L + ++ + +A PD D A E +R+R Sbjct: 1 MDAATCAQMRERLLSLRDELIAKGKESIPPARTDAVAQPDE-DEAPLTEMTQSIASSRNR 59 Query: 92 ER-KLIKKIEKTLKKVEDE--DFGYCESCGVEIGIRRLEARPTADLCIDCKTLAEIREK 147 ER + + I + L ++++ ++G CE C I RRLE P +C+ C+ E + Sbjct: 60 ERAQKLAAIREALLLIDEDPEEYGMCEDCEEPIKRRRLELMPWVSVCVQCQEKRERDGR 118 >UniRef50_A1WBE4 Transcriptional regulator, TraR/DksA family n=3 Tax=Comamonadaceae RepID=A1WBE4_ACISJ Length = 150 Score = 72.3 bits (176), Expect = 4e-12, Method: Composition-based stats. Identities = 35/149 (23%), Positives = 66/149 (44%), Gaps = 10/149 (6%) Query: 10 SSLSILAIAGVEPYQEKPGEE----YMNEAQLAHFRRILEAWRNQLRDEVDRT------V 59 + +L + PY++ E ++++Q R LE + QL E+ V Sbjct: 2 ARRVVLDVCQHVPYRQWHAETMNTTPLSDSQREQLRGALEQRKQQLLAELGEAQRDTLAV 61 Query: 60 THMQDEAANFPDPVDRAAQEEEFSLELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGV 119 + +A D D+A + + ++ R+ + + L ++ D +G C CG Sbjct: 62 ATNRADAERLDDRKDQADRMAQATVRDAEATRDHDELVAVRAALARLADGSYGECTDCGQ 121 Query: 120 EIGIRRLEARPTADLCIDCKTLAEIREKQ 148 +G+ RL A+P A CI C++ AE R ++ Sbjct: 122 PVGVARLLAQPAAARCIACQSKAEARGER 150 >UniRef50_D1SGF0 Transcriptional regulator, TraR/DksA family n=1 Tax=Micromonospora aurantiaca ATCC 27029 RepID=D1SGF0_9ACTO Length = 103 Score = 71.9 bits (175), Expect = 6e-12, Method: Composition-based stats. Identities = 23/105 (21%), Positives = 41/105 (39%), Gaps = 10/105 (9%) Query: 38 AHFRRILEAWRNQLRDEVDRTVTHMQDEAANFPDPVDRAAQEEEFSLELRNRDRERKLIK 97 R +L+ + D++ H + DP R + R+ + Sbjct: 9 DTLRELLDRQFGEYTDQLTELTLHTRQPDYGGHDP----------DTLRRLIETARQGVA 58 Query: 98 KIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLA 142 + LK++ + +G CE CG +I RLE P+A C+ C+ Sbjct: 59 DTAQALKRMSEGTYGVCERCGQDIPTARLEILPSARFCVPCQQRR 103 >UniRef50_D2B0C3 Transcriptional regulator, TraR/DksA family n=1 Tax=Streptosporangium roseum DSM 43021 RepID=D2B0C3_STRRD Length = 110 Score = 71.9 bits (175), Expect = 6e-12, Method: Composition-based stats. Identities = 26/103 (25%), Positives = 45/103 (43%), Gaps = 3/103 (2%) Query: 43 ILEAWRNQLRDEVDRTVTHMQDEAANFPDPVDRAAQEEEFSLELRNRDRERKLIKKIEKT 102 L+ R +L ++ R + D D A + S L + + + + + Sbjct: 11 QLDTIREELEGQLFRWTRQLADLETAVNDD---AVEVSAKSGLLADIVSAERNLAVVRQA 67 Query: 103 LKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAEIR 145 L+ V + +G C+ CG+ I RL+ARP A C+ C+ E R Sbjct: 68 LRDVTELTYGRCDGCGLAIPFERLKARPLARFCMLCQRRHESR 110 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_Q89AR3 DnaK suppressor protein homolog n=7 Tax=Gammapro... 152 3e-36 UniRef50_P0ABS3 DnaK suppressor protein n=247 Tax=Proteobacteria... 144 9e-34 UniRef50_A7K6F3 DnaK suppressor protein (Fragment) n=48 Tax=Vibr... 140 2e-32 UniRef50_P43758 DnaK suppressor protein homolog n=104 Tax=Proteo... 137 1e-31 UniRef50_Q21SV6 Transcriptional regulators, TraR/DksA family n=5... 131 7e-30 UniRef50_B4SQA3 Transcriptional regulator, TraR/DksA family n=35... 125 3e-28 UniRef50_Q5UF45 Predicted DskA family protein n=4 Tax=Bacteria R... 124 8e-28 UniRef50_A8PLZ9 Suppressor protein DksA n=3 Tax=Gammaproteobacte... 123 1e-27 UniRef50_A7C5U4 Zn-finger, prokaryotic DksA/TraR C4 type n=1 Tax... 122 2e-27 UniRef50_Q12EM6 Transcriptional regulators, TraR/DksA family n=6... 121 7e-27 UniRef50_A6T2Z9 DnaK suppressor protein n=5 Tax=Betaproteobacter... 120 1e-26 UniRef50_Q31G85 Transcriptional regulators, TraR/DksA family n=1... 119 2e-26 UniRef50_Q2LSS1 DnaK suppressor protein n=13 Tax=Deltaproteobact... 117 2e-25 UniRef50_Q67Q17 Putative uncharacterized protein n=1 Tax=Symbiob... 116 2e-25 UniRef50_B3DUR8 DnaK suppressor protein n=1 Tax=Methylacidiphilu... 115 3e-25 UniRef50_Q6SHS2 DnaK suppressor protein n=1 Tax=uncultured marin... 115 4e-25 UniRef50_B5GH83 DNA-binding protein n=1 Tax=Streptomyces sp. SPB... 112 3e-24 UniRef50_B9XR79 Transcriptional regulator, TraR/DksA family n=1 ... 112 3e-24 UniRef50_Q1GI88 Transcriptional regulators TraR/DksA family n=26... 111 7e-24 UniRef50_A7HW84 Transcriptional regulator, TraR/DksA family n=68... 111 8e-24 UniRef50_A4J571 Transcriptional regulator, TraR/DksA family n=1 ... 111 8e-24 UniRef50_A0LCU1 Transcriptional regulator, TraR/DksA family n=2 ... 111 9e-24 UniRef50_A1AL35 Transcriptional regulator, TraR/DksA family n=8 ... 110 1e-23 UniRef50_Q0A892 Transcriptional regulators, TraR/DksA family n=1... 110 1e-23 UniRef50_A5EW31 RNA polymerase-binding protein DksA n=2 Tax=Gamm... 110 2e-23 UniRef50_A3RXC3 DnaK suppressor protein n=1 Tax=Ralstonia solana... 109 2e-23 UniRef50_B5EG80 Transcriptional regulator, TraR/DksA family n=4 ... 109 3e-23 UniRef50_Q2RK56 Transcriptional regulators, TraR/DksA family n=1... 109 3e-23 UniRef50_A1HSA8 Transcriptional regulator, TraR/DksA family n=1 ... 108 4e-23 UniRef50_B8J371 Transcriptional regulator, TraR/DksA family n=2 ... 108 4e-23 UniRef50_A5D3H2 Putative uncharacterized protein n=1 Tax=Pelotom... 108 6e-23 UniRef50_B6BSH6 DnaK suppressor protein n=6 Tax=Bacteria RepID=B... 108 7e-23 UniRef50_Q1MS84 Molecular chaperone dnaK n=4 Tax=Deltaproteobact... 107 9e-23 UniRef50_C0QFB9 DksA1 n=1 Tax=Desulfobacterium autotrophicum HRM... 107 1e-22 UniRef50_B0K2T3 Transcriptional regulator, TraR/DksA family n=10... 107 1e-22 UniRef50_C0ZG84 Putative uncharacterized protein yteA n=1 Tax=Br... 107 2e-22 UniRef50_C8W4E4 Transcriptional regulator, TraR/DksA family n=1 ... 106 2e-22 UniRef50_B8H0C0 DnaK suppressor protein homolog n=110 Tax=Bacter... 106 2e-22 UniRef50_B4D0A5 Transcriptional regulator, TraR/DksA family n=2 ... 106 3e-22 UniRef50_D2LWG8 Transcriptional regulator, TraR/DksA family n=1 ... 105 4e-22 UniRef50_C6D536 Transcriptional regulator, TraR/DksA family n=2 ... 105 4e-22 UniRef50_Q3ABZ5 Putative transcriptional regulator n=1 Tax=Carbo... 105 4e-22 UniRef50_A5W685 Transcriptional regulator, TraR/DksA family n=11... 105 5e-22 UniRef50_C8PIH5 DnaK suppressor protein n=1 Tax=Campylobacter gr... 105 6e-22 UniRef50_B3EAN1 Transcriptional regulator, TraR/DksA family n=8 ... 104 8e-22 UniRef50_C9S0U4 Transcriptional regulator, TraR/DksA family n=14... 104 8e-22 UniRef50_C7QCE7 Transcriptional regulator, TraR/DksA family n=1 ... 104 9e-22 UniRef50_Q3A0W2 DnaK suppressor protein n=2 Tax=Proteobacteria R... 104 1e-21 UniRef50_B8FT18 Transcriptional regulator, TraR/DksA family n=2 ... 104 1e-21 UniRef50_UPI0001788757 transcriptional regulator, TraR/DksA fami... 103 1e-21 UniRef50_B1I4J4 Transcriptional regulator, TraR/DksA family n=1 ... 103 2e-21 UniRef50_A3DD29 Transcriptional regulators, TraR/DksA family n=5... 103 2e-21 UniRef50_A7H9X1 Transcriptional regulator, TraR/DksA family n=7 ... 103 2e-21 UniRef50_B2A2J0 Transcriptional regulator, TraR/DksA family n=1 ... 102 3e-21 UniRef50_B8CWL7 Transcriptional regulator, TraR/DksA family n=1 ... 102 4e-21 UniRef50_B0SIE7 DnaK suppressor protein n=6 Tax=Leptospira RepID... 102 4e-21 UniRef50_Q97H97 General stress protein, DnaK suppressor DskA, YT... 102 4e-21 UniRef50_C6PE95 Transcriptional regulator, TraR/DksA family n=1 ... 101 6e-21 UniRef50_B3QWB1 Transcriptional regulator, TraR/DksA family n=1 ... 101 7e-21 UniRef50_C6J3C7 DnaK suppressor protein n=2 Tax=Bacillales RepID... 101 9e-21 UniRef50_A8EWK7 DnaK suppressor protein DksA n=1 Tax=Arcobacter ... 101 9e-21 UniRef50_C1I8K1 Putative uncharacterized protein n=1 Tax=Clostri... 101 9e-21 UniRef50_D2L9K5 Transcriptional regulator, TraR/DksA family n=2 ... 100 1e-20 UniRef50_Q182T9 Putative general stress protein n=7 Tax=Clostrid... 100 2e-20 UniRef50_A8MH72 Transcriptional regulator, TraR/DksA family n=1 ... 100 2e-20 UniRef50_D2L3E3 Transcriptional regulator, TraR/DksA family n=2 ... 100 2e-20 UniRef50_C0GJQ4 Transcriptional regulator, TraR/DksA family n=1 ... 100 2e-20 UniRef50_Q1IJ15 Transcriptional regulators, TraR/DksA family n=1... 100 2e-20 UniRef50_Q9S2X6 Putative DNA-binding protein n=2 Tax=Streptomyce... 99 3e-20 UniRef50_A1VXK8 DnaK suppressor protein, putative n=15 Tax=Campy... 99 4e-20 UniRef50_Q8ESP2 Hypothetical conserved protein n=1 Tax=Oceanobac... 99 4e-20 UniRef50_A0RK79 DnaK suppressor protein n=74 Tax=Bacillus RepID=... 99 5e-20 UniRef50_A9G9K0 Putative dnaK suppressor protein n=1 Tax=Sorangi... 99 5e-20 UniRef50_UPI0001AEC064 DnaK suppressor protein n=1 Tax=Alteromon... 99 5e-20 UniRef50_B9L783 Transcriptional regulator, TraR/DksA family n=1 ... 99 6e-20 UniRef50_B0TGP7 Putative uncharacterized protein n=1 Tax=Helioba... 99 6e-20 UniRef50_B1ZV03 Transcriptional regulator, TraR/DksA family n=2 ... 99 6e-20 UniRef50_Q021M5 Transcriptional regulator, TraR/DksA family n=1 ... 98 6e-20 UniRef50_C6Q1P6 Transcriptional regulator, TraR/DksA family n=13... 98 7e-20 UniRef50_Q0EXX5 Transcriptional regulators, TraR/DksA family pro... 98 7e-20 UniRef50_Q01TC0 Transcriptional regulator, TraR/DksA family n=1 ... 98 8e-20 UniRef50_B5JMU6 Putative uncharacterized protein n=1 Tax=Verruco... 98 8e-20 UniRef50_Q2SLB9 DnaK suppressor protein n=7 Tax=Gammaproteobacte... 98 9e-20 UniRef50_B4U7Z4 Transcriptional regulator, TraR/DksA family n=3 ... 98 1e-19 UniRef50_Q2GI38 DnaK suppressor protein n=9 Tax=Anaplasmataceae ... 97 1e-19 UniRef50_O66611 Uncharacterized protein aq_250 n=3 Tax=Aquificac... 97 1e-19 UniRef50_B1J6V4 Transcriptional regulator, TraR/DksA family n=4 ... 97 1e-19 UniRef50_A0LTP3 Transcriptional regulators, TraR/DksA family n=7... 97 1e-19 UniRef50_B1H0G2 Putative dnaK suppressor n=1 Tax=uncultured Term... 97 1e-19 UniRef50_D1CBT8 Transcriptional regulator, TraR/DksA family n=1 ... 97 2e-19 UniRef50_Q894D3 DnaK suppressor protein n=1 Tax=Clostridium teta... 97 2e-19 UniRef50_D1C5L2 Transcriptional regulator, TraR/DksA family n=1 ... 97 2e-19 UniRef50_Q1JWV8 Transcriptional regulators, TraR/DksA family n=1... 97 2e-19 UniRef50_A8GD52 Transcriptional regulator, TraR/DksA family n=9 ... 97 2e-19 UniRef50_P42408 Uncharacterized protein yteA n=2 Tax=Bacillus su... 97 2e-19 UniRef50_D1C120 Transcriptional regulator, TraR/DksA family n=1 ... 97 2e-19 UniRef50_D0LZD2 Transcriptional regulator, TraR/DksA family n=3 ... 96 2e-19 UniRef50_A1SL71 Zinc finger, DksA/TraR C4-type n=4 Tax=Actinomyc... 96 2e-19 UniRef50_Q253H0 DnaK suppressor n=16 Tax=Chlamydiales RepID=Q253... 96 3e-19 UniRef50_C9R7U4 Transcriptional regulator, TraR/DksA family n=1 ... 96 3e-19 UniRef50_Q2B4E3 Putative uncharacterized protein n=4 Tax=Bacillu... 96 3e-19 UniRef50_C8X580 Transcriptional regulator, TraR/DksA family n=1 ... 95 4e-19 UniRef50_A4SHJ5 DnaK suppressor protein n=3 Tax=Gammaproteobacte... 95 6e-19 UniRef50_A4V7S0 Putative transcriptional regulator DnaK suppress... 95 7e-19 UniRef50_B2ULP7 Transcriptional regulator, TraR/DksA family n=1 ... 95 8e-19 UniRef50_Q73KX9 C4 zinc finger domain protein, DksA/TraR family ... 95 8e-19 UniRef50_C5RLG0 Transcriptional regulator, TraR/DksA family n=1 ... 95 8e-19 UniRef50_A0Q071 General stress protein, DnaK suppressor DskA n=3... 95 9e-19 UniRef50_Q30RD2 Transcriptional regulators, TraR/DksA family n=3... 94 9e-19 UniRef50_B0VG86 Putative uncharacterized protein n=1 Tax=Candida... 94 1e-18 UniRef50_C1DXT7 Transcriptional regulator, TraR/DksA family n=5 ... 94 1e-18 UniRef50_C8WW56 Transcriptional regulator, TraR/DksA family n=2 ... 94 2e-18 UniRef50_A3ZQT2 Probable DnaK suppressor protein n=1 Tax=Blastop... 94 2e-18 UniRef50_A1QYW3 DnaK suppressor protein n=21 Tax=Borrelia RepID=... 94 2e-18 UniRef50_B2S244 Possible dnaK suppressor n=3 Tax=Treponema RepID... 94 2e-18 UniRef50_A6DCX4 Transcriptional regulator, TraR/DksA family prot... 93 2e-18 UniRef50_A6TRY0 Transcriptional regulator, TraR/DksA family n=1 ... 93 2e-18 UniRef50_C5EYJ0 DnaK suppressor protein n=4 Tax=Helicobacter Rep... 93 2e-18 UniRef50_Q0VNX0 DnaK suppressor protein homolog, DksA/TraR famil... 93 3e-18 UniRef50_D1YA14 C4-type zinc finger protein, DksA/TraR family n=... 93 3e-18 UniRef50_A4XKS6 Transcriptional regulator, TraR/DksA family n=2 ... 92 4e-18 UniRef50_Q5WFI4 Putative uncharacterized protein n=1 Tax=Bacillu... 92 4e-18 UniRef50_C0GTL3 Transcriptional regulator, TraR/DksA family n=1 ... 92 4e-18 UniRef50_A9B2U1 Transcriptional regulator, TraR/DksA family n=1 ... 92 5e-18 UniRef50_Q30V43 Transcriptional regulators, TraR/DksA family n=1... 92 5e-18 UniRef50_B4UII3 Transcriptional regulator, TraR/DksA family n=4 ... 92 6e-18 UniRef50_D2R5D7 Transcriptional regulator, TraR/DksA family n=1 ... 92 7e-18 UniRef50_A6Q9W6 DnaK suppressor protein DksA n=1 Tax=Sulfurovum ... 92 7e-18 UniRef50_Q72G22 C4-type zinc finger protein, DksA/TraR family n=... 91 8e-18 UniRef50_D1X2L9 Transcriptional regulator, TraR/DksA family n=5 ... 91 8e-18 UniRef50_Q01U65 Transcriptional regulator, TraR/DksA family n=1 ... 91 1e-17 UniRef50_A6WCW5 Transcriptional regulator, TraR/DksA family n=10... 91 1e-17 UniRef50_Q2YD37 Transcriptional regulators, TraR/DksA family n=2... 91 1e-17 UniRef50_A0RMM0 Transcriptional regulators, TraR/DksA family n=9... 91 1e-17 UniRef50_B3ELW2 Transcriptional regulator, TraR/DksA family n=11... 91 1e-17 UniRef50_C6C0K2 Transcriptional regulator, TraR/DksA family n=1 ... 90 1e-17 UniRef50_Q1Q506 Similar to DnaK suppressor protein n=1 Tax=Candi... 90 1e-17 UniRef50_D2R7B0 Transcriptional regulator, TraR/DksA family n=2 ... 90 2e-17 UniRef50_A4XDN2 Zinc finger, DksA/TraR C4-type n=5 Tax=Actinomyc... 90 2e-17 UniRef50_C7LTL7 Transcriptional regulator, TraR/DksA family n=1 ... 90 2e-17 UniRef50_C9RQK2 Transcriptional regulator, TraR/DksA family n=1 ... 90 2e-17 UniRef50_C6HWS3 Transcriptional regulator, TraR/DksA family n=3 ... 90 2e-17 UniRef50_C1F3S7 Putative RNA polymerase-binding protein DksA n=1... 90 3e-17 UniRef50_C1A882 Putative uncharacterized protein n=1 Tax=Gemmati... 89 3e-17 UniRef50_Q9K9V1 BH2544 protein n=2 Tax=Bacillus RepID=Q9K9V1_BACHD 89 3e-17 UniRef50_A6DK24 DnaK suppressor, putative n=1 Tax=Lentisphaera a... 89 3e-17 UniRef50_B8DQJ2 Transcriptional regulator, TraR/DksA family n=1 ... 89 4e-17 UniRef50_C1ZKC1 DnaK suppressor protein n=1 Tax=Planctomyces lim... 89 4e-17 UniRef50_Q7UR73 Probable DnaK suppressor protein n=1 Tax=Rhodopi... 89 4e-17 UniRef50_A5UPY9 Transcriptional regulator, TraR/DksA family n=2 ... 89 6e-17 UniRef50_D0D572 Transcriptional regulator, TraR/DksA family n=1 ... 89 6e-17 UniRef50_Q48NH0 RNA polymerase-binding protein DksA n=2 Tax=Pseu... 88 7e-17 UniRef50_A0LGY5 Transcriptional regulator, TraR/DksA family n=1 ... 88 9e-17 UniRef50_A0LMB8 Transcriptional regulator, TraR/DksA family n=1 ... 88 1e-16 UniRef50_Q029W8 Transcriptional regulator, TraR/DksA family n=1 ... 87 1e-16 UniRef50_Q0AHN9 Transcriptional regulators, TraR/DksA family pro... 87 1e-16 UniRef50_A9AKZ2 Transcriptional regulator, TraR/DksA family n=5 ... 87 1e-16 UniRef50_A2SLK5 Putative DNA-binding protein n=1 Tax=Methylibium... 87 2e-16 UniRef50_UPI0001C4239D hypothetical protein BpOF4_09730 n=1 Tax=... 87 2e-16 UniRef50_Q39WX5 Transcriptional regulators, TraR/DksA family n=4... 87 2e-16 UniRef50_Q221D7 Transcriptional regulators, TraR/DksA family n=3... 87 2e-16 UniRef50_A3IED4 DnaK suppressor protein n=2 Tax=Bacillaceae RepI... 87 2e-16 UniRef50_B2V854 Transcriptional regulator, TraR/DksA family n=4 ... 87 2e-16 UniRef50_Q3A5P4 DnaK suppressor protein n=1 Tax=Pelobacter carbi... 87 2e-16 UniRef50_D1BG79 DnaK suppressor protein n=1 Tax=Sanguibacter ked... 86 2e-16 UniRef50_C4KZG3 Transcriptional regulator, TraR/DksA family n=2 ... 86 3e-16 UniRef50_A4BMT6 Putative uncharacterized protein n=1 Tax=Nitroco... 86 3e-16 UniRef50_Q02C95 Transcriptional regulator, TraR/DksA family n=1 ... 86 4e-16 UniRef50_B8J655 Transcriptional regulator, TraR/DksA family n=3 ... 85 4e-16 UniRef50_A1DZZ7 DnaK suppressor protein n=1 Tax=Halobacillus hal... 85 4e-16 UniRef50_A1B0I3 Transcriptional regulator, TraR/DksA family n=9 ... 85 6e-16 UniRef50_A6U730 Transcriptional regulator, TraR/DksA family n=4 ... 85 6e-16 UniRef50_D0LJW3 Transcriptional regulator, TraR/DksA family n=1 ... 85 6e-16 UniRef50_B8H9G6 Transcriptional regulator, TraR/DksA family n=3 ... 85 6e-16 UniRef50_A1K6D2 Conserved hypothetical DnaK suppressor protein n... 85 7e-16 UniRef50_C9NIY3 Transcriptional regulator, TraR/DksA family n=3 ... 85 7e-16 UniRef50_D2R2J7 Transcriptional regulator, TraR/DksA family n=1 ... 85 7e-16 UniRef50_Q7VGT4 DnaK suppressor protein DskA n=2 Tax=Helicobacte... 85 8e-16 UniRef50_D1C0D4 Transcriptional regulator, TraR/DksA family n=2 ... 84 1e-15 UniRef50_Q0AYC5 Transcriptional regulators, TraR/DksA family n=1... 84 1e-15 UniRef50_B3ES66 Putative uncharacterized protein n=1 Tax=Candida... 84 1e-15 UniRef50_B2KE71 Transcriptional regulator, TraR/DksA family n=1 ... 84 1e-15 UniRef50_Q2GEN7 DnaK suppressor protein n=2 Tax=Neorickettsia Re... 84 1e-15 UniRef50_C3XG00 DnaK suppressor protein n=1 Tax=Helicobacter bil... 84 2e-15 UniRef50_UPI00019074B1 putative DnaK suppressor protein n=1 Tax=... 84 2e-15 UniRef50_B5YGE3 DnaK suppressor protein n=1 Tax=Thermodesulfovib... 84 2e-15 UniRef50_Q021L0 Transcriptional regulator, TraR/DksA family n=1 ... 84 2e-15 UniRef50_Q7UEL7 Probable dnaK (DksA-like) supressor protein n=1 ... 84 2e-15 UniRef50_A6FXL2 DnaK suppressor protein, putative n=1 Tax=Plesio... 84 2e-15 UniRef50_B2V8G8 Transcriptional regulator, TraR/DksA family n=4 ... 84 2e-15 UniRef50_A4X6U9 Zinc finger, DksA/TraR C4-type n=4 Tax=Micromono... 83 2e-15 UniRef50_Q2SPR7 DnaK suppressor protein n=1 Tax=Hahella chejuens... 83 2e-15 UniRef50_Q2NBT1 Putative uncharacterized protein n=1 Tax=Erythro... 83 2e-15 UniRef50_D1N407 Transcriptional regulator, TraR/DksA family n=1 ... 83 2e-15 UniRef50_B4D2T0 Transcriptional regulator, TraR/DksA family n=1 ... 83 3e-15 UniRef50_A5WFD1 Transcriptional regulator, TraR/DksA family n=3 ... 83 3e-15 UniRef50_Q3JAV6 Putative uncharacterized protein n=2 Tax=Nitroso... 82 4e-15 UniRef50_B9XD69 Transcriptional regulator, TraR/DksA family n=1 ... 82 4e-15 UniRef50_B5YK78 RNA polymerase-binding protein DksA n=1 Tax=Ther... 82 5e-15 UniRef50_C0QW50 DNA-binding transcriptional regulator of transcr... 82 5e-15 UniRef50_D1UB56 Transcriptional regulator, TraR/DksA family n=1 ... 82 5e-15 UniRef50_C0R4V6 DnaK suppressor protein, putative n=6 Tax=Wolbac... 82 6e-15 UniRef50_C1SL78 DnaK suppressor protein n=1 Tax=Denitrovibrio ac... 82 7e-15 UniRef50_Q5WGI4 General stress protein GSP160 n=1 Tax=Bacillus c... 82 8e-15 UniRef50_C6I0P9 Transcriptional regulator, TraR/DksA family n=3 ... 81 8e-15 UniRef50_UPI00016C3CE0 transcriptional regulators, TraR/DksA fam... 81 1e-14 UniRef50_D0LUD2 Transcriptional regulator, TraR/DksA family n=1 ... 81 1e-14 UniRef50_A6C001 Probable DnaK suppressor protein n=1 Tax=Plancto... 81 1e-14 UniRef50_Q1MI46 Putative dnaK suppressor protein n=2 Tax=Rhizobi... 81 1e-14 UniRef50_Q8ENZ4 Putative uncharacterized protein OB2328 n=1 Tax=... 81 1e-14 UniRef50_A0LSA0 Transcriptional regulators, TraR/DksA family n=1... 80 1e-14 UniRef50_Q2BI57 Zn-finger, prokaryotic DksA/TraR C4 type n=1 Tax... 80 1e-14 UniRef50_P80872 General stress protein 16O n=2 Tax=Bacillus subt... 80 2e-14 UniRef50_C6E710 Transcriptional regulator, TraR/DksA family n=3 ... 80 2e-14 UniRef50_C7PES3 Transcriptional regulator, TraR/DksA family n=4 ... 80 2e-14 UniRef50_Q6MHM2 DnaK deletion suppressor protein n=2 Tax=Bdellov... 80 2e-14 UniRef50_B2UIX3 Transcriptional regulator, TraR/DksA family n=6 ... 80 3e-14 UniRef50_D0MD16 Transcriptional regulator, TraR/DksA family n=2 ... 80 3e-14 UniRef50_C7HYG4 Transcriptional regulator, TraR/DksA family n=1 ... 80 3e-14 UniRef50_D1ACI4 Transcriptional regulator, TraR/DksA family n=2 ... 79 3e-14 UniRef50_A0AZX7 Transcriptional regulators, TraR/DksA family n=3... 79 4e-14 UniRef50_Q12HC6 Transcriptional regulators, TraR/DksA family n=1... 79 4e-14 UniRef50_A4CBE2 Putative uncharacterized protein n=1 Tax=Pseudoa... 79 5e-14 UniRef50_A4F8B9 Possible suppressor protein DnaK n=6 Tax=Actinom... 79 5e-14 UniRef50_D2B0C3 Transcriptional regulator, TraR/DksA family n=1 ... 79 6e-14 UniRef50_B1KG10 Transcriptional regulator, TraR/DksA family n=1 ... 79 6e-14 UniRef50_Q2K1F6 Putative DnaK suppressor protein n=1 Tax=Rhizobi... 79 6e-14 UniRef50_C5C3L5 Transcriptional regulator, TraR/DksA family n=1 ... 79 6e-14 UniRef50_A3X4N5 DnaK suppressor protein n=5 Tax=Rhodobacterales ... 78 7e-14 UniRef50_Q48AS1 Putative uncharacterized protein n=1 Tax=Colwell... 78 7e-14 UniRef50_Q7MQQ3 Putative uncharacterized protein n=1 Tax=Wolinel... 78 8e-14 UniRef50_D0JAK5 DnaK suppressor protein n=13 Tax=Bacteroidetes R... 78 8e-14 UniRef50_Q12E87 Transcriptional regulators, TraR/DksA family n=1... 77 1e-13 UniRef50_C3KFN9 Putative uncharacterized protein n=8 Tax=Bacteri... 77 1e-13 UniRef50_Q11YT2 Possible DNAK suppressor protein n=6 Tax=Bactero... 77 1e-13 UniRef50_C5CLF2 Transcriptional regulator, TraR/DksA family n=1 ... 77 2e-13 UniRef50_B7S312 Putative uncharacterized protein n=1 Tax=marine ... 77 2e-13 UniRef50_A3JJC9 Putative uncharacterized protein n=1 Tax=Marinob... 77 2e-13 UniRef50_Q3J1J5 DnaK suppressor protein n=5 Tax=Rhodobacter RepI... 77 2e-13 UniRef50_B8GPY8 Transcriptional regulator, TraR/DksA family n=1 ... 77 2e-13 UniRef50_Q473A0 Zn-finger, prokaryotic DksA/TraR C4 type n=3 Tax... 77 2e-13 UniRef50_C7R8Q8 Transcriptional regulator, TraR/DksA family n=1 ... 77 2e-13 UniRef50_Q1LEV8 Transcriptional regulators, TraR/DksA family n=1... 77 3e-13 UniRef50_B9KZU6 Putative uncharacterized protein n=1 Tax=Thermom... 76 3e-13 UniRef50_A6QA93 Putative uncharacterized protein n=1 Tax=Sulfuro... 76 3e-13 UniRef50_B7RRT7 DnaK suppressor protein n=1 Tax=Roseobacter sp. ... 76 3e-13 UniRef50_B7S3A6 Putative uncharacterized protein n=1 Tax=marine ... 76 4e-13 UniRef50_A6Q8R9 DnaK suppressor protein DksA n=1 Tax=Sulfurovum ... 76 4e-13 UniRef50_B8DLC7 Transcriptional regulator, TraR/DksA family n=1 ... 75 6e-13 UniRef50_B8GMT5 Transcriptional regulator, TraR/DksA family n=2 ... 75 6e-13 Sequences not found previously or not previously below threshold: >UniRef50_Q89AR3 DnaK suppressor protein homolog n=7 Tax=Gammaproteobacteria RepID=DKSA_BUCBP Length = 151 Score = 152 bits (385), Expect = 3e-36, Method: Composition-based stats. Identities = 105/151 (69%), Positives = 134/151 (88%) Query: 1 MQEGQNRKTSSLSILAIAGVEPYQEKPGEEYMNEAQLAHFRRILEAWRNQLRDEVDRTVT 60 MQ+ +N+K SSLSIL +AGV+PY+ K E+YMN Q+ HF++IL AW+NQLR+++ +T Sbjct: 1 MQKEKNKKQSSLSILFMAGVQPYKNKKNEKYMNTKQIDHFKKILIAWKNQLRNDISQTRL 60 Query: 61 HMQDEAANFPDPVDRAAQEEEFSLELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVE 120 ++QD+A N+PDP+DRA QEEEFS ELR+RDRERKLI+KIEKTLKKVE++DFGYCESCG+E Sbjct: 61 NIQDKATNYPDPIDRAVQEEEFSFELRHRDRERKLIEKIEKTLKKVENKDFGYCESCGIE 120 Query: 121 IGIRRLEARPTADLCIDCKTLAEIREKQMAG 151 IGI+RLEARPTA+LCIDCKTL+EIREKQ+ G Sbjct: 121 IGIKRLEARPTANLCIDCKTLSEIREKQILG 151 >UniRef50_P0ABS3 DnaK suppressor protein n=247 Tax=Proteobacteria RepID=DKSA_ECO57 Length = 151 Score = 144 bits (363), Expect = 9e-34, Method: Composition-based stats. Identities = 151/151 (100%), Positives = 151/151 (100%) Query: 1 MQEGQNRKTSSLSILAIAGVEPYQEKPGEEYMNEAQLAHFRRILEAWRNQLRDEVDRTVT 60 MQEGQNRKTSSLSILAIAGVEPYQEKPGEEYMNEAQLAHFRRILEAWRNQLRDEVDRTVT Sbjct: 1 MQEGQNRKTSSLSILAIAGVEPYQEKPGEEYMNEAQLAHFRRILEAWRNQLRDEVDRTVT 60 Query: 61 HMQDEAANFPDPVDRAAQEEEFSLELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVE 120 HMQDEAANFPDPVDRAAQEEEFSLELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVE Sbjct: 61 HMQDEAANFPDPVDRAAQEEEFSLELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVE 120 Query: 121 IGIRRLEARPTADLCIDCKTLAEIREKQMAG 151 IGIRRLEARPTADLCIDCKTLAEIREKQMAG Sbjct: 121 IGIRRLEARPTADLCIDCKTLAEIREKQMAG 151 >UniRef50_A7K6F3 DnaK suppressor protein (Fragment) n=48 Tax=Vibrionales RepID=A7K6F3_VIBSE Length = 208 Score = 140 bits (352), Expect = 2e-32, Method: Composition-based stats. Identities = 116/144 (80%), Positives = 131/144 (90%) Query: 6 NRKTSSLSILAIAGVEPYQEKPGEEYMNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDE 65 K ++ ILAIAGVEPYQEKPGEEYM+ Q+ HF +IL AWR+QLR EVDRTV HMQDE Sbjct: 3 ESKKKTIGILAIAGVEPYQEKPGEEYMSPEQVEHFTKILTAWRDQLRAEVDRTVHHMQDE 62 Query: 66 AANFPDPVDRAAQEEEFSLELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRR 125 AANFPDPVDRA+QEEEFSLELRNRDRER+LIKKIEKTL K++++DFG+CESCGVEIG+RR Sbjct: 63 AANFPDPVDRASQEEEFSLELRNRDRERRLIKKIEKTLDKIKEDDFGFCESCGVEIGVRR 122 Query: 126 LEARPTADLCIDCKTLAEIREKQM 149 LEARPTADLCIDCKTLAEI+EKQM Sbjct: 123 LEARPTADLCIDCKTLAEIKEKQM 146 >UniRef50_P43758 DnaK suppressor protein homolog n=104 Tax=Proteobacteria RepID=DKSA_HAEIN Length = 145 Score = 137 bits (344), Expect = 1e-31, Method: Composition-based stats. Identities = 107/145 (73%), Positives = 121/145 (83%) Query: 7 RKTSSLSILAIAGVEPYQEKPGEEYMNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEA 66 +SLS+L +AGV+PYQ K EEYMNE Q+ HFR+IL AW Q+ +E RTV HMQDE Sbjct: 1 MSRASLSLLDLAGVKPYQMKKDEEYMNEEQILHFRKILNAWHEQIVEEASRTVAHMQDEV 60 Query: 67 ANFPDPVDRAAQEEEFSLELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRL 126 NFPDP DRA QEEEFSLELRNRDRERKL+KKIE TLKK++ +DFGYC+ CG EIGIRRL Sbjct: 61 TNFPDPADRATQEEEFSLELRNRDRERKLMKKIEATLKKLDTDDFGYCDCCGEEIGIRRL 120 Query: 127 EARPTADLCIDCKTLAEIREKQMAG 151 EARPTADLCIDCKTLAEIREKQ+AG Sbjct: 121 EARPTADLCIDCKTLAEIREKQVAG 145 >UniRef50_Q21SV6 Transcriptional regulators, TraR/DksA family n=58 Tax=Betaproteobacteria RepID=Q21SV6_RHOFD Length = 429 Score = 131 bits (330), Expect = 7e-30, Method: Composition-based stats. Identities = 57/124 (45%), Positives = 83/124 (66%) Query: 27 PGEEYMNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAANFPDPVDRAAQEEEFSLEL 86 P +EYMN+ QLA FRR+L A + + +T H++ + PDP DRA EEE +LEL Sbjct: 305 PDDEYMNDTQLAFFRRVLTALKQDILSNAGQTTEHLRADTVVVPDPADRATIEEEHALEL 364 Query: 87 RNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAEIRE 146 R RDRERKL+KKIE++L +++ D+GYC+ G IG+ RL ARPTA+L ++ + E+++ Sbjct: 365 RTRDRERKLLKKIEQSLARIDSGDYGYCDETGEAIGVGRLLARPTANLSLEAQQRRELKQ 424 Query: 147 KQMA 150 K Sbjct: 425 KMFG 428 >UniRef50_B4SQA3 Transcriptional regulator, TraR/DksA family n=35 Tax=Proteobacteria RepID=B4SQA3_STRM5 Length = 405 Score = 125 bits (315), Expect = 3e-28, Method: Composition-based stats. Identities = 58/131 (44%), Positives = 81/131 (61%) Query: 20 VEPYQEKPGEEYMNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAANFPDPVDRAAQE 79 Y+ EEYM+ Q +FR+ L+ WR L +E +T+ ++++E + D +RA +E Sbjct: 274 PAGYKPSSEEEYMSPLQQEYFRQRLQNWRADLVEESKQTIENLREEVRDIGDEAERATRE 333 Query: 80 EEFSLELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCK 139 E SLELR RDR RKLI KI+ TLK++E D+GYC G EIG+ RLEAR TA+ ID + Sbjct: 334 TENSLELRTRDRYRKLIGKIDSTLKRLEAGDYGYCVDTGEEIGLERLEARLTAERTIDAQ 393 Query: 140 TLAEIREKQMA 150 E +KQ Sbjct: 394 ERWEHLQKQQG 404 >UniRef50_Q5UF45 Predicted DskA family protein n=4 Tax=Bacteria RepID=Q5UF45_9PROT Length = 202 Score = 124 bits (311), Expect = 8e-28, Method: Composition-based stats. Identities = 78/145 (53%), Positives = 103/145 (71%) Query: 7 RKTSSLSILAIAGVEPYQEKPGEEYMNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEA 66 + + + +PY+ K E+YMN+ Q HF +L AW+ L +E ++T +Q + Sbjct: 58 SASPTDFSAFLKNFQPYRSKKSEKYMNKNQQKHFLGMLTAWKEALIEEQEKTEQLIQQDQ 117 Query: 67 ANFPDPVDRAAQEEEFSLELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRL 126 +NFPD +DRAA+EEEF LELR R+RERKLI KI+ +LK +ED +GYCESCGVEIGI+RL Sbjct: 118 SNFPDSLDRAAKEEEFMLELRKRERERKLIAKIDLSLKDLEDNLYGYCESCGVEIGIKRL 177 Query: 127 EARPTADLCIDCKTLAEIREKQMAG 151 EARPTA CIDCKT+ EI+EKQ G Sbjct: 178 EARPTATKCIDCKTVDEIKEKQQFG 202 >UniRef50_A8PLZ9 Suppressor protein DksA n=3 Tax=Gammaproteobacteria RepID=A8PLZ9_9COXI Length = 295 Score = 123 bits (309), Expect = 1e-27, Method: Composition-based stats. Identities = 83/134 (61%), Positives = 104/134 (77%) Query: 18 AGVEPYQEKPGEEYMNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAANFPDPVDRAA 77 + PY+E+PGE+YM+ +Q A+FRR+L + L +++ RTV H+QDE PD DRA Sbjct: 162 LNIAPYKERPGEDYMSSSQQAYFRRLLLQRKRVLLEDMGRTVHHLQDEGTPLPDMSDRAT 221 Query: 78 QEEEFSLELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCID 137 QEEEF+LELR RDRERKLIKKIE L ++++ +G+C SCGVEIGIRRLEARPTA+LCID Sbjct: 222 QEEEFNLELRARDRERKLIKKIEDALHQLDEGHYGFCSSCGVEIGIRRLEARPTANLCID 281 Query: 138 CKTLAEIREKQMAG 151 CKTL EIREKQ G Sbjct: 282 CKTLDEIREKQTGG 295 >UniRef50_A7C5U4 Zn-finger, prokaryotic DksA/TraR C4 type n=1 Tax=Beggiatoa sp. PS RepID=A7C5U4_9GAMM Length = 155 Score = 122 bits (307), Expect = 2e-27, Method: Composition-based stats. Identities = 64/136 (47%), Positives = 87/136 (63%) Query: 12 LSILAIAGVEPYQEKPGEEYMNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAANFPD 71 +S + I + PY GEEYM+ QL HF+R+L W+ L D+V RTV MQD +NF D Sbjct: 1 MSEVQIPTITPYHSSEGEEYMSNKQLEHFQRVLLQWKQNLMDDVTRTVHQMQDNLSNFAD 60 Query: 72 PVDRAAQEEEFSLELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPT 131 P DRA QEEEF++ELR RDRERKLIKKI+ +LK ++ +++G+ + + + Sbjct: 61 PNDRATQEEEFTIELRTRDRERKLIKKIDASLKTIDTKEYGFVSVVALRLVFIAWKLDLM 120 Query: 132 ADLCIDCKTLAEIREK 147 CIDCKT E+REK Sbjct: 121 LAKCIDCKTRDEVREK 136 >UniRef50_Q12EM6 Transcriptional regulators, TraR/DksA family n=65 Tax=Betaproteobacteria RepID=Q12EM6_POLSJ Length = 450 Score = 121 bits (304), Expect = 7e-27, Method: Composition-based stats. Identities = 55/130 (42%), Positives = 83/130 (63%) Query: 21 EPYQEKPGEEYMNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAANFPDPVDRAAQEE 80 E + P EYMNE Q+A FR L + ++ + T H++++ PDP DRA EE Sbjct: 320 EEVKAMPDSEYMNEKQMAFFRHKLSVLKQEIHNSAGETTEHLREDTVVVPDPADRATIEE 379 Query: 81 EFSLELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKT 140 E +LELR RDRERKL+KKIE+++ +++ D+GYC+ G IG+ RL ARPTA+L ++ + Sbjct: 380 EHALELRTRDRERKLLKKIEQSIARIDSGDYGYCDETGEPIGVGRLIARPTANLSLEAQQ 439 Query: 141 LAEIREKQMA 150 E+++K Sbjct: 440 RRELKQKMFG 449 >UniRef50_A6T2Z9 DnaK suppressor protein n=5 Tax=Betaproteobacteria RepID=A6T2Z9_JANMA Length = 310 Score = 120 bits (301), Expect = 1e-26, Method: Composition-based stats. Identities = 55/150 (36%), Positives = 86/150 (57%), Gaps = 1/150 (0%) Query: 1 MQEGQNRKTSSLSILAIAGVEPYQEKPGEEYMNEAQLAHFRRILEAWRNQLRDEVDRTVT 60 + ++ TS S + + ++YMN+AQLA F+ L+ L D T Sbjct: 161 VATKSSKSTSVASDTTLLTEAQILKMGEKDYMNDAQLAFFKNRLQQLEKDLLKNADETTE 220 Query: 61 HMQDEAANFPDPVDRAAQEEEFSLELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVE 120 H+++ PDP DRA EEE +LELR RDRERKL+KK++++L ++ ++G+CE G Sbjct: 221 HLRE-TVLVPDPADRATIEEEHALELRTRDRERKLLKKVQQSLLSIDSGEYGWCEETGEP 279 Query: 121 IGIRRLEARPTADLCIDCKTLAEIREKQMA 150 IG+ RL ARPTA L ++ + E+++K Sbjct: 280 IGVPRLLARPTATLSLEAQQRRELKQKLYG 309 >UniRef50_Q31G85 Transcriptional regulators, TraR/DksA family n=1 Tax=Thiomicrospira crunogena XCL-2 RepID=Q31G85_THICR Length = 142 Score = 119 bits (299), Expect = 2e-26, Method: Composition-based stats. Identities = 73/137 (53%), Positives = 95/137 (69%) Query: 13 SILAIAGVEPYQEKPGEEYMNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAANFPDP 72 S I Y+ KPGEEYM+ L HF+ L AW+ QL E TV H++ +++ DP Sbjct: 4 SSDFIEDYPQYEMKPGEEYMSPEMLEHFKNKLLAWKKQLIWEATNTVQHLRTDSSTPADP 63 Query: 73 VDRAAQEEEFSLELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTA 132 DRA+QEEEF+LELR RDRERKLI KI+K+L+ +ED D+GYC+ G EIG+ R+EARPTA Sbjct: 64 SDRASQEEEFALELRTRDRERKLISKIDKSLRDIEDGDYGYCKMSGEEIGLARMEARPTA 123 Query: 133 DLCIDCKTLAEIREKQM 149 L ++ KT E+REKQ Sbjct: 124 TLTVEMKTKQEMREKQG 140 >UniRef50_Q2LSS1 DnaK suppressor protein n=13 Tax=Deltaproteobacteria RepID=Q2LSS1_SYNAS Length = 150 Score = 117 bits (292), Expect = 2e-25, Method: Composition-based stats. Identities = 54/119 (45%), Positives = 76/119 (63%) Query: 29 EEYMNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAANFPDPVDRAAQEEEFSLELRN 88 E ++ +L FR +L N+L ++ +TV M D N+PDP DRA+ E + + ELR Sbjct: 28 EMALSHDKLEFFRMLLTQKINELLEDAGKTVADMTDSKENYPDPTDRASLESDRNFELRM 87 Query: 89 RDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAEIREK 147 RDRERKLI K+++ +K++++ +FG CE CG I +RL ARP LCIDCKT E EK Sbjct: 88 RDRERKLIAKMQEAIKRIDEGEFGLCEVCGGPISEKRLMARPVTTLCIDCKTKQEKLEK 146 >UniRef50_Q67Q17 Putative uncharacterized protein n=1 Tax=Symbiobacterium thermophilum RepID=Q67Q17_SYMTH Length = 269 Score = 116 bits (291), Expect = 2e-25, Method: Composition-based stats. Identities = 32/123 (26%), Positives = 55/123 (44%), Gaps = 9/123 (7%) Query: 36 QLAHFRRILEAWRNQLRDEVDRTVT---------HMQDEAANFPDPVDRAAQEEEFSLEL 86 Q+ R++L R + +V +Q+++ P D + E S +L Sbjct: 2 QIEELRQMLLQEREAYQRQVAMIEETGLGTSQGDQLQEDSTVDNHPADLGTETFERSKDL 61 Query: 87 RNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAEIRE 146 R + I++IE L++++ +G CE CG I RL+A P+A CI C+ E R Sbjct: 62 GLRSHMLRRIQEIESALQRMDQGTYGICEECGRPIDPERLKAFPSATTCITCQQRREARP 121 Query: 147 KQM 149 + Sbjct: 122 DRF 124 >UniRef50_B3DUR8 DnaK suppressor protein n=1 Tax=Methylacidiphilum infernorum V4 RepID=B3DUR8_METI4 Length = 249 Score = 115 bits (289), Expect = 3e-25, Method: Composition-based stats. Identities = 30/146 (20%), Positives = 61/146 (41%), Gaps = 4/146 (2%) Query: 1 MQEGQNRKTSSLSILAIAGVEPYQEKPGEEYMNEAQLAHFRRILEAWRNQLRDEVDRTVT 60 + E + +L+I+ + P +E+ + + +L R + + +V ++ Sbjct: 71 VSEKIDMSNPNLTIMDL----PEEERKEFLRVQKERLLDLREQIIEQMEGVSSDVLKSRP 126 Query: 61 HMQDEAANFPDPVDRAAQEEEFSLELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVE 120 + D + L +E + +I+ +LK++ED +G C+ CG Sbjct: 127 EGGESTGFGVHQADAGTDVYDRDFALSLLSQENDSLIEIDDSLKRIEDNTYGICQMCGKP 186 Query: 121 IGIRRLEARPTADLCIDCKTLAEIRE 146 I I RL+A P A +DC+ E + Sbjct: 187 IPIIRLQAIPYARFTVDCQRQLEKEK 212 >UniRef50_Q6SHS2 DnaK suppressor protein n=1 Tax=uncultured marine bacterium 311 RepID=Q6SHS2_9BACT Length = 190 Score = 115 bits (289), Expect = 4e-25, Method: Composition-based stats. Identities = 72/153 (47%), Positives = 102/153 (66%), Gaps = 2/153 (1%) Query: 1 MQEGQNRKTSSLSILAIAGVEPYQEKPGEEYMNEAQLAHFRRILEAWRNQLRDEVDRTVT 60 +++ + + +A VEPY+ E+YM+ Q HF +ILE W+ L+ E RT Sbjct: 38 VEKKIRQPSYLGEEAFLATVEPYKLNKKEKYMSAKQKKHFLKILERWKQLLQLEQSRTAD 97 Query: 61 HMQDEAANFPDPVDRAAQEEEFSLELRNRDRERKLIKKIEKTLKKVEDEDFGYCE--SCG 118 +Q+ + +F D DRA EE F+LE++ R+RERKL+ KI++++K + + D+G+C +CG Sbjct: 98 KIQNNSNHFADDSDRATHEEGFTLEIKTRERERKLLTKIDQSVKGLSNHDYGFCLNPNCG 157 Query: 119 VEIGIRRLEARPTADLCIDCKTLAEIREKQMAG 151 VEIGIRRLEARPTA LCIDCKTL EI EKQ G Sbjct: 158 VEIGIRRLEARPTARLCIDCKTLEEITEKQQYG 190 >UniRef50_B5GH83 DNA-binding protein n=1 Tax=Streptomyces sp. SPB74 RepID=B5GH83_9ACTO Length = 232 Score = 112 bits (281), Expect = 3e-24, Method: Composition-based stats. Identities = 35/131 (26%), Positives = 58/131 (44%), Gaps = 5/131 (3%) Query: 20 VEPYQEKPGEEYMNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAANFPD-----PVD 74 +PGE+ + A R+ LE LR E++ + + D D Sbjct: 102 PAELAVRPGEDPWTAEEAAEARQGLEQEIAGLRAELETAEADLASLMRDSADGAGDDEAD 161 Query: 75 RAAQEEEFSLELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADL 134 + EL R+ +++ E+ L +++ +G CE+CG IG R++A P A L Sbjct: 162 TGTKNVTREHELALAAGSRERLEQTERALLRMDAGTYGVCENCGKPIGKARMQAFPHAIL 221 Query: 135 CIDCKTLAEIR 145 C+DCK +E R Sbjct: 222 CVDCKQKSERR 232 >UniRef50_B9XR79 Transcriptional regulator, TraR/DksA family n=1 Tax=bacterium Ellin514 RepID=B9XR79_9BACT Length = 192 Score = 112 bits (281), Expect = 3e-24, Method: Composition-based stats. Identities = 31/142 (21%), Positives = 54/142 (38%), Gaps = 1/142 (0%) Query: 6 NRKTSSLSILAIAGVEPYQEKPGEEYMNEAQLAHFRRILEAWRNQLRDEVDRTVTH-MQD 64 ++ S + +I G+ + K E + + A + + L R QL ++ Q+ Sbjct: 15 SKSVRSATAASILGLPSEKAKKNGEAKIKPEWAGYYQNLLELREQLLKQMSGLAKESAQE 74 Query: 65 EAANFPDPVDRAAQEEEFSLELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIR 124 A D + L ++ I +IE+ LK++E +G CE G I Sbjct: 75 LAGYSLHMADSGTDNFDRDFALSLLSSDQDAIYEIEEALKRIEKNTYGVCELTGKPIPKA 134 Query: 125 RLEARPTADLCIDCKTLAEIRE 146 RLEA P + + E Sbjct: 135 RLEAIPWTRFTVQAQAQLEKEG 156 >UniRef50_Q1GI88 Transcriptional regulators TraR/DksA family n=26 Tax=Alphaproteobacteria RepID=Q1GI88_SILST Length = 158 Score = 111 bits (277), Expect = 7e-24, Method: Composition-based stats. Identities = 51/132 (38%), Positives = 84/132 (63%) Query: 16 AIAGVEPYQEKPGEEYMNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAANFPDPVDR 75 + E Y+ E +MNE Q+ +FRR L W+ +L DE T+ +Q+ N PD DR Sbjct: 22 DVFLPEDYRPAEDEPFMNERQMEYFRRKLLNWKAELLDESRDTIEGLQENTRNIPDVADR 81 Query: 76 AAQEEEFSLELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLC 135 A++E + +LELR RDR+RKL+ KI+ ++++++ ++GYC+ G I ++RL+ARP A + Sbjct: 82 ASEETDRALELRTRDRQRKLVAKIDAAIRRIDEGEYGYCDVTGEPISLKRLDARPIATMS 141 Query: 136 IDCKTLAEIREK 147 ++ + E REK Sbjct: 142 LEAQERHERREK 153 >UniRef50_A7HW84 Transcriptional regulator, TraR/DksA family n=68 Tax=Alphaproteobacteria RepID=A7HW84_PARL1 Length = 146 Score = 111 bits (277), Expect = 8e-24, Method: Composition-based stats. Identities = 55/133 (41%), Positives = 83/133 (62%) Query: 15 LAIAGVEPYQEKPGEEYMNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAANFPDPVD 74 +A+ + Y E +MN+ Q +FRR LE W+ + E T+ H+QD++ PD D Sbjct: 9 MAVRLPKGYMPSDDEPFMNKRQKEYFRRKLEKWKEDILKENRETLQHLQDDSVQHPDIAD 68 Query: 75 RAAQEEEFSLELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADL 134 RA+ E E SLELR RDR+RKL+ KI+ ++++++ +GYCE G I ++RL+ARP A L Sbjct: 69 RASSETERSLELRTRDRQRKLVSKIDAAIRRIDEGTYGYCEETGEPISLKRLDARPIATL 128 Query: 135 CIDCKTLAEIREK 147 I+ + E REK Sbjct: 129 SIEAQERHERREK 141 >UniRef50_A4J571 Transcriptional regulator, TraR/DksA family n=1 Tax=Desulfotomaculum reducens MI-1 RepID=A4J571_DESRM Length = 234 Score = 111 bits (277), Expect = 8e-24, Method: Composition-based stats. Identities = 31/127 (24%), Positives = 51/127 (40%), Gaps = 9/127 (7%) Query: 32 MNEAQLAHFRRILEAWRNQLRDEVD---------RTVTHMQDEAANFPDPVDRAAQEEEF 82 +++ Q+ ++ L R + D ++ + + P D A + E Sbjct: 2 LDQQQIECYKNKLLNMREHMLDRIEGMNEGGMGESMSDSFGELSTYDNHPGDVATEMFER 61 Query: 83 SLELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLA 142 + R+ + I+ L K+E+ +G CE C EI RLEA P CIDCK+ Sbjct: 62 GKDFALREDAITTLGAIDDALDKMEEGMYGICEVCHQEISQDRLEAIPYTTQCIDCKSRD 121 Query: 143 EIREKQM 149 E K Sbjct: 122 EHLPKSH 128 >UniRef50_A0LCU1 Transcriptional regulator, TraR/DksA family n=2 Tax=Proteobacteria RepID=A0LCU1_MAGSM Length = 155 Score = 111 bits (277), Expect = 9e-24, Method: Composition-based stats. Identities = 68/142 (47%), Positives = 92/142 (64%) Query: 6 NRKTSSLSILAIAGVEPYQEKPGEEYMNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDE 65 ++ + I I E Y EEYM E Q A FR L W+ QL +E ++TV M +E Sbjct: 3 DQGVAEKKIADIILPEGYTPSEDEEYMCEMQRAFFRHQLLIWKQQLVEEAEKTVLGMHEE 62 Query: 66 AANFPDPVDRAAQEEEFSLELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRR 125 A F DP DRA+ E + + ELR RDRERKLI KI++T++ +E++++G+C CGVEIG+ R Sbjct: 63 KAVFADPTDRASLETDRNFELRTRDRERKLIGKIDRTIRTIEEDEYGFCSGCGVEIGLGR 122 Query: 126 LEARPTADLCIDCKTLAEIREK 147 L+ARP DLCIDCKT E E+ Sbjct: 123 LQARPVTDLCIDCKTKEEQMER 144 >UniRef50_A1AL35 Transcriptional regulator, TraR/DksA family n=8 Tax=Deltaproteobacteria RepID=A1AL35_PELPD Length = 118 Score = 110 bits (276), Expect = 1e-23, Method: Composition-based stats. Identities = 57/118 (48%), Positives = 76/118 (64%) Query: 32 MNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAANFPDPVDRAAQEEEFSLELRNRDR 91 M +L +FR +L L E +TVT M +++NFPDP DRA QE + + ELR RDR Sbjct: 1 MEAEKLEYFRNVLMEEMKSLLSEAGKTVTEMTADSSNFPDPTDRATQESDRNFELRIRDR 60 Query: 92 ERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAEIREKQM 149 ERKLI KI++ L +++ +FG CE CG EIG RL+ RP LCI+CK AE +EK+ Sbjct: 61 ERKLINKIKEALSRIDSGEFGICEECGDEIGEARLKVRPVTTLCINCKLEAEKKEKRP 118 >UniRef50_Q0A892 Transcriptional regulators, TraR/DksA family n=10 Tax=Gammaproteobacteria RepID=Q0A892_ALHEH Length = 149 Score = 110 bits (276), Expect = 1e-23, Method: Composition-based stats. Identities = 58/141 (41%), Positives = 88/141 (62%) Query: 7 RKTSSLSILAIAGVEPYQEKPGEEYMNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEA 66 + E P E+YMN+ QLA+FR++LE R ++ + ++ T H++D+ Sbjct: 5 SSVPPEEAPVMLTKEQLLASPPEDYMNDEQLAYFRQLLEKERKEILEGLESTTRHLRDDN 64 Query: 67 ANFPDPVDRAAQEEEFSLELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRL 126 + PD DRA EEE+ LELR R+RE +L++KI++ L+++E ++GYCE G IGI RL Sbjct: 65 SREPDEHDRATLEEEYQLELRIRERETRLLRKIDQALRRIETGEYGYCEVTGEPIGIPRL 124 Query: 127 EARPTADLCIDCKTLAEIREK 147 ARPTA L I+ K AE+ E+ Sbjct: 125 LARPTATLSIEAKERAEVEER 145 >UniRef50_A5EW31 RNA polymerase-binding protein DksA n=2 Tax=Gammaproteobacteria RepID=A5EW31_DICNV Length = 143 Score = 110 bits (274), Expect = 2e-23, Method: Composition-based stats. Identities = 69/134 (51%), Positives = 90/134 (67%) Query: 17 IAGVEPYQEKPGEEYMNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAANFPDPVDRA 76 I Y E YM+E QL +F RIL+ W+ + + ++T +++DE D DRA Sbjct: 5 IKIKNKYTPAADEPYMSEQQLDYFSRILQEWKATILADSEKTREYLKDERPQTADLNDRA 64 Query: 77 AQEEEFSLELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCI 136 +QEEEFSLELR RDRERKL++KI+K L++++ FGYCE C EIG RLEARPTA+LCI Sbjct: 65 SQEEEFSLELRTRDRERKLLRKIDKALERIKQGHFGYCEQCDEEIGFHRLEARPTAELCI 124 Query: 137 DCKTLAEIREKQMA 150 DCK LAE +EK Sbjct: 125 DCKHLAERKEKSFY 138 >UniRef50_A3RXC3 DnaK suppressor protein n=1 Tax=Ralstonia solanacearum UW551 RepID=A3RXC3_RALSO Length = 224 Score = 109 bits (273), Expect = 2e-23, Method: Composition-based stats. Identities = 55/141 (39%), Positives = 88/141 (62%), Gaps = 1/141 (0%) Query: 10 SSLSILAIAGVEPYQEKPGEEYMNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAANF 69 +++S + + ++YMNEAQLA F+ LE R+ + +T H+++ Sbjct: 84 ATMSSKTLLTEAEILKMSDKDYMNEAQLAFFKDRLEKLRDDILKNAGQTTEHLRE-TVIV 142 Query: 70 PDPVDRAAQEEEFSLELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEAR 129 PDP DRA EEE +LELR RDRERKL+KK+E++++++++ ++GYC+ G IG+ RL AR Sbjct: 143 PDPADRATIEEEHALELRTRDRERKLLKKVEQSIQRIDEGNYGYCDETGEPIGVPRLLAR 202 Query: 130 PTADLCIDCKTLAEIREKQMA 150 PTA L ++ + E R+K Sbjct: 203 PTATLTLEAQERREKRQKLFG 223 >UniRef50_B5EG80 Transcriptional regulator, TraR/DksA family n=4 Tax=Proteobacteria RepID=B5EG80_GEOBB Length = 118 Score = 109 bits (273), Expect = 3e-23, Method: Composition-based stats. Identities = 57/116 (49%), Positives = 74/116 (63%) Query: 32 MNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAANFPDPVDRAAQEEEFSLELRNRDR 91 MN +L +FR IL+ + L +E RTV+ M + NFPDP DRA QE + + ELR RDR Sbjct: 1 MNTEKLEYFRGILQEEKRSLLEEAGRTVSEMTSDTTNFPDPTDRATQESDRTFELRIRDR 60 Query: 92 ERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAEIREK 147 ERKLI KI++ L ++E FG CE C +I RL+ARP LCIDCK E +E+ Sbjct: 61 ERKLIVKIQEALARIEAGTFGICEVCEEDISEARLKARPVTTLCIDCKMEQEKKER 116 >UniRef50_Q2RK56 Transcriptional regulators, TraR/DksA family n=1 Tax=Moorella thermoacetica ATCC 39073 RepID=Q2RK56_MOOTA Length = 251 Score = 109 bits (272), Expect = 3e-23, Method: Composition-based stats. Identities = 36/123 (29%), Positives = 59/123 (47%), Gaps = 9/123 (7%) Query: 32 MNEAQLAHFRRILEAWRNQLRDEV---------DRTVTHMQDEAANFPDPVDRAAQEEEF 82 M+ LAHFR+ L + L +++ + + Q+ + P D +E E Sbjct: 1 MDRQSLAHFRQKLLEEKAGLEEQLDSLNSGGLGESLLESTQELSRYDNHPGDLGTEEFER 60 Query: 83 SLELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLA 142 +L RD + ++KIE L+ + + +GYC CG EI RLEA P LC++C+ Sbjct: 61 GKDLALRDNVQVQLRKIEDALQSIAEGTYGYCRRCGREIPRERLEAIPETTLCLECRRKM 120 Query: 143 EIR 145 E + Sbjct: 121 EGK 123 >UniRef50_A1HSA8 Transcriptional regulator, TraR/DksA family n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HSA8_9FIRM Length = 227 Score = 108 bits (271), Expect = 4e-23, Method: Composition-based stats. Identities = 33/120 (27%), Positives = 56/120 (46%), Gaps = 9/120 (7%) Query: 32 MNEAQLAHFRRILEAWRNQLRDEVDRTVTH---------MQDEAANFPDPVDRAAQEEEF 82 M++ + LE + +L ++ R + + + P D + E Sbjct: 1 MDQKDRKPLVQWLEKEKARLLSQISRLEESGIGDTMSDSIGELSVYDNHPADIGDELFER 60 Query: 83 SLELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLA 142 S +L RD L++++E L+KV ++G C++CG EIGI RL+A P A CI C+ Sbjct: 61 SKDLALRDNAHLLLEQVEHALEKVAAGNYGICDNCGREIGIERLQAIPYAARCIVCEKKY 120 >UniRef50_B8J371 Transcriptional regulator, TraR/DksA family n=2 Tax=Desulfovibrio RepID=B8J371_DESDA Length = 120 Score = 108 bits (271), Expect = 4e-23, Method: Composition-based stats. Identities = 47/116 (40%), Positives = 68/116 (58%) Query: 32 MNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAANFPDPVDRAAQEEEFSLELRNRDR 91 M+ L +FR++L + + + D T+ + D F DP DRA E + + LR RDR Sbjct: 1 MDHKDLEYFRKLLSGMLEEAQQKGDSTIEELTDSNEVFADPADRATAESDRAFTLRIRDR 60 Query: 92 ERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAEIREK 147 ER+LI+KI+ L +++D +G CE CG +I I RL+ARP LCI+CK E E Sbjct: 61 ERRLIRKIQAALTRIDDGTYGICEDCGDDISIPRLKARPVTRLCINCKAKQEEDEH 116 >UniRef50_A5D3H2 Putative uncharacterized protein n=1 Tax=Pelotomaculum thermopropionicum SI RepID=A5D3H2_PELTS Length = 242 Score = 108 bits (269), Expect = 6e-23, Method: Composition-based stats. Identities = 31/127 (24%), Positives = 54/127 (42%), Gaps = 9/127 (7%) Query: 30 EYMNEAQLAHFRRILEAWRNQLRDEVD---------RTVTHMQDEAANFPDPVDRAAQEE 80 E + + L F++ L R L +D + + + P D ++ Sbjct: 4 EAVQQEMLMKFKQRLLDERENLTRRIDFIDGQGLGVAMEDSIGELSTCDNHPADIGSELF 63 Query: 81 EFSLELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKT 140 E S + R+ + I++ L K+E+ +G C++CG EI + RLEA P+ C CK Sbjct: 64 ERSKDFALRENAMLAVAAIDRALAKIENGTYGKCDNCGREIPLERLEAVPSTVCCKKCKE 123 Query: 141 LAEIREK 147 E + Sbjct: 124 AEEKNTR 130 >UniRef50_B6BSH6 DnaK suppressor protein n=6 Tax=Bacteria RepID=B6BSH6_9RICK Length = 180 Score = 108 bits (269), Expect = 7e-23, Method: Composition-based stats. Identities = 42/148 (28%), Positives = 72/148 (48%), Gaps = 1/148 (0%) Query: 4 GQNRKTSSLSILAIAGVEPYQEKPGEEYMNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQ 63 K ++ I + Y K E+YM E FR L W+ +L + + + Sbjct: 31 KTVSKPKVVAKAPIKISKTYVPKDTEKYMCEKHKVFFRMRLTEWKKELVKANNEALYNGS 90 Query: 64 -DEAANFPDPVDRAAQEEEFSLELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIG 122 D+ + D VD+A+ + ++E++ +R+ KLI +I+K L ++ ++ +GYC IG Sbjct: 91 MDDNSISADIVDQASSYTDKNVEMKAINRQIKLISEIDKALARIREDIYGYCLDTAEPIG 150 Query: 123 IRRLEARPTADLCIDCKTLAEIREKQMA 150 ++RL ARP A I + E EK A Sbjct: 151 LKRLMARPVAKYTIAAQEKHEKDEKVHA 178 >UniRef50_Q1MS84 Molecular chaperone dnaK n=4 Tax=Deltaproteobacteria RepID=Q1MS84_LAWIP Length = 133 Score = 107 bits (268), Expect = 9e-23, Method: Composition-based stats. Identities = 45/115 (39%), Positives = 70/115 (60%) Query: 32 MNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAANFPDPVDRAAQEEEFSLELRNRDR 91 + + + +FR +L + + + D T+ + D F DP DRA+ E + + LR RDR Sbjct: 14 LEQKDIEYFRALLTTMLEEAQHKGDSTLEDLTDGNEIFADPADRASAESDRAFTLRIRDR 73 Query: 92 ERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAEIRE 146 ER+LI+KI+ L++++D +G CE CG +IG RL+ARP LCI+CK+ E E Sbjct: 74 ERRLIRKIQSALQRIDDGTYGVCEDCGDDIGTPRLKARPVTKLCINCKSRQEEGE 128 >UniRef50_C0QFB9 DksA1 n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QFB9_DESAH Length = 177 Score = 107 bits (267), Expect = 1e-22, Method: Composition-based stats. Identities = 35/127 (27%), Positives = 60/127 (47%), Gaps = 2/127 (1%) Query: 18 AGVEPYQEKPGEEYMNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAANFPDPVDRAA 77 VE Y E YMN+ QL +FR L L + ++ DP D + Sbjct: 4 EKVEHYTPSDKEVYMNQRQLQYFRERLLMELEDL--NMVTAHHRAGVQSIGTSDPGDLSF 61 Query: 78 QEEEFSLELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCID 137 E + +++L + K +K++ L+++++ +FGYC G IG+ RLE P A L ++ Sbjct: 62 FETKMAMQLTKLNHYHKKLKQVMLALERIDEGNFGYCLLSGNRIGLNRLEVLPWATLAVE 121 Query: 138 CKTLAEI 144 + + E Sbjct: 122 TQEMLER 128 >UniRef50_B0K2T3 Transcriptional regulator, TraR/DksA family n=10 Tax=Thermoanaerobacteraceae RepID=B0K2T3_THEPX Length = 206 Score = 107 bits (266), Expect = 1e-22, Method: Composition-based stats. Identities = 30/127 (23%), Positives = 57/127 (44%), Gaps = 11/127 (8%) Query: 32 MNEAQLAHFRRILEAWRNQLRDEVDRT-----------VTHMQDEAANFPDPVDRAAQEE 80 M+ +L HFR++L + ++ +++ + Q+ + P D A++ Sbjct: 1 MDSEKLEHFRQLLLKEKEKVLSTINQMNLNDGIGGIAQREYYQELSLLDNHPADFASEVY 60 Query: 81 EFSLELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKT 140 E +D E+ ++++IE K++E +G C C I RLEA P LC +C Sbjct: 61 EVEKNYALKDNEKYILRQIEDAFKRMEIGTYGICAHCHKPIEEERLEALPYTVLCAECAK 120 Query: 141 LAEIREK 147 ++ K Sbjct: 121 NNDLELK 127 >UniRef50_C0ZG84 Putative uncharacterized protein yteA n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZG84_BREBN Length = 257 Score = 107 bits (266), Expect = 2e-22, Method: Composition-based stats. Identities = 29/114 (25%), Positives = 55/114 (48%), Gaps = 7/114 (6%) Query: 33 NEAQLAHFRRILEAWRNQLRDEVDR-------TVTHMQDEAANFPDPVDRAAQEEEFSLE 85 ++ +A FR L + +L D V T +Q+ + P D ++ E + Sbjct: 6 DQKMVASFREKLLEQKKELEDRVQDHYGMREPMTTSLQEFSMYDNHPADIGSEMFEREKD 65 Query: 86 LRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCK 139 L +R+ +K+I++ L+++E+ +G C CG +I + RLEA P + C + Sbjct: 66 LALDSLDRETLKEIDQALQRMEEGTYGLCTVCGEQIPVERLEALPQSQTCKEHA 119 >UniRef50_C8W4E4 Transcriptional regulator, TraR/DksA family n=1 Tax=Desulfotomaculum acetoxidans DSM 771 RepID=C8W4E4_DESAS Length = 231 Score = 106 bits (265), Expect = 2e-22, Method: Composition-based stats. Identities = 33/122 (27%), Positives = 50/122 (40%), Gaps = 9/122 (7%) Query: 32 MNEAQLAHFRRILEAWRNQLRDEVDR---------TVTHMQDEAANFPDPVDRAAQEEEF 82 M+ ++ F+ L + +L D V + + P D ++ E Sbjct: 1 MDRQKMQAFKETLLKEKKELEDSVHSFDERGLGISLSQATSELSTYDNHPADVGSEVFER 60 Query: 83 SLELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLA 142 S + RD I+ +E LK +E +G C+ CG EIG RL A P LC +CK Sbjct: 61 SKDFALRDDAMLKIRAVEDALKNIEMGKYGICDICGKEIGYARLTALPRTTLCKECKEAQ 120 Query: 143 EI 144 E Sbjct: 121 ER 122 >UniRef50_B8H0C0 DnaK suppressor protein homolog n=110 Tax=Bacteria RepID=DKSA_CAUCN Length = 142 Score = 106 bits (265), Expect = 2e-22, Method: Composition-based stats. Identities = 54/128 (42%), Positives = 81/128 (63%) Query: 12 LSILAIAGVEPYQEKPGEEYMNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAANFPD 71 + + Y+ E +MN+ QL +F++ L AW+ ++ E TV+H+Q E N D Sbjct: 2 QTATVLVEKSDYRPSEDEPFMNDRQLEYFKQKLLAWKEEILRESRETVSHLQKETENHAD 61 Query: 72 PVDRAAQEEEFSLELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPT 131 DRA+ E + +LELR RDR+RKLI KI++ L++VED +GYCE G IG+ RLEARPT Sbjct: 62 LADRASSETDRALELRTRDRQRKLISKIDQALRRVEDGSYGYCEETGEPIGLARLEARPT 121 Query: 132 ADLCIDCK 139 A + ++ + Sbjct: 122 ATMSVEAQ 129 >UniRef50_B4D0A5 Transcriptional regulator, TraR/DksA family n=2 Tax=Verrucomicrobia RepID=B4D0A5_9BACT Length = 233 Score = 106 bits (264), Expect = 3e-22, Method: Composition-based stats. Identities = 30/154 (19%), Positives = 58/154 (37%), Gaps = 7/154 (4%) Query: 1 MQEGQNRKTSSLSILAIAGVEPYQEKPGEEYMNEAQLAHFRRILEAWRNQLRDEV----- 55 + + + + P ++ + L + L R+ + D + Sbjct: 47 VAKAPAKANGEKVAANPEPKTNGKPAPPKKVVLTPFLIKQKDRLLQLRDSMLDSMMGVAK 106 Query: 56 --DRTVTHMQDEAANFPDPVDRAAQEEEFSLELRNRDRERKLIKKIEKTLKKVEDEDFGY 113 RT + +A D + + L +E+ + +IE+ LK++E +G Sbjct: 107 DNLRTRAEGSEASAFGMHQADAGSDAYDRDFALSLLSQEQDALYEIEEALKRIELGTYGV 166 Query: 114 CESCGVEIGIRRLEARPTADLCIDCKTLAEIREK 147 CE G I RLEA P A ++C++ E + K Sbjct: 167 CEMSGKPIAHPRLEALPFARYTVECQSQIEKQGK 200 >UniRef50_D2LWG8 Transcriptional regulator, TraR/DksA family n=1 Tax=Bacillus cellulosilyticus DSM 2522 RepID=D2LWG8_BACS4 Length = 242 Score = 105 bits (263), Expect = 4e-22, Method: Composition-based stats. Identities = 25/127 (19%), Positives = 51/127 (40%), Gaps = 9/127 (7%) Query: 32 MNEAQLAHFRRILEAWRNQLRDEVDR---------TVTHMQDEAANFPDPVDRAAQEEEF 82 + Q+ ++ L + + ++ + + + P D+ + E Sbjct: 2 LTNDQINALKKELMQMKEEQLTRLNGQHYGLELELLKESVGELSNYDNHPGDQGTELYER 61 Query: 83 SLELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLA 142 ++ + +L+ +I+ LK +E+ +G CE CG +I RLEA P A CI Sbjct: 62 EKDIALNEHSEQLLDEIDNALKAIEEGSYGKCEVCGTDIPYERLEAIPNARRCIQHAEEK 121 Query: 143 EIREKQM 149 + K+ Sbjct: 122 SVSNKRP 128 >UniRef50_C6D536 Transcriptional regulator, TraR/DksA family n=2 Tax=Paenibacillus RepID=C6D536_PAESJ Length = 234 Score = 105 bits (263), Expect = 4e-22, Method: Composition-based stats. Identities = 31/127 (24%), Positives = 54/127 (42%), Gaps = 9/127 (7%) Query: 33 NEAQLAHFRRILEAWRNQLRDEVDR---------TVTHMQDEAANFPDPVDRAAQEEEFS 83 N QLA R LEA + ++ + R + + + P D + E S Sbjct: 3 NATQLAQLRNRLEAEKREIEERQSRNEHNGLASSLRDNTGELSPIDNHPADLGTELFERS 62 Query: 84 LELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAE 143 +L + E + +I + L+ +++ +G C +CG I RLEA P + C++ E Sbjct: 63 KDLALLENEDLHLTRISQALEAMDNGTYGQCRACGKPIPDERLEALPDSLYCVEHAPRQE 122 Query: 144 IREKQMA 150 +Q A Sbjct: 123 TSHRQPA 129 >UniRef50_Q3ABZ5 Putative transcriptional regulator n=1 Tax=Carboxydothermus hydrogenoformans Z-2901 RepID=Q3ABZ5_CARHZ Length = 213 Score = 105 bits (262), Expect = 4e-22, Method: Composition-based stats. Identities = 24/118 (20%), Positives = 49/118 (41%), Gaps = 8/118 (6%) Query: 36 QLAHFRRILEAWRNQLRDEVDRTV--------THMQDEAANFPDPVDRAAQEEEFSLELR 87 +A F+++L + + + Q+ + P D ++ E S + Sbjct: 2 DIAIFKKMLLKLKEEYEKRLLELKKSEENPFFESTQELSFYDNHPGDLGSESFERSKDFA 61 Query: 88 NRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAEIR 145 D + +++I++ + + +G C CG +I + RL A P A C+ C+ E R Sbjct: 62 LIDNLKLKLRQIDEAIALINQGKYGLCIDCGQKIPVDRLFANPVAIRCVACQKRVEER 119 >UniRef50_A5W685 Transcriptional regulator, TraR/DksA family n=11 Tax=Pseudomonas RepID=A5W685_PSEP1 Length = 154 Score = 105 bits (262), Expect = 5e-22, Method: Composition-based stats. Identities = 42/144 (29%), Positives = 73/144 (50%), Gaps = 1/144 (0%) Query: 6 NRKTSSLSILAIAGVEPYQEKPGEEYMNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDE 65 NR + I E ++YMN QLA F +L+A + + + ++ + T ++ Sbjct: 9 NRPNAHFFIEKSMTKEQLLAMSADDYMNADQLAFFTELLQAMKVETHERIELSRTTIEGL 68 Query: 66 AANFPDPVDRAAQEEEFSLELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRR 125 DP D A+ EEE S + DR+++L+ ++E L ++ DE FG+C+ G IG++R Sbjct: 69 DT-PSDPADVASVEEERSWLVNAIDRDQRLLPQLEMALDRIADESFGWCDDSGEPIGLKR 127 Query: 126 LEARPTADLCIDCKTLAEIREKQM 149 L PT CI+ + E ++ Sbjct: 128 LLISPTTKYCIEAQERHEQLDRHQ 151 >UniRef50_C8PIH5 DnaK suppressor protein n=1 Tax=Campylobacter gracilis RM3268 RepID=C8PIH5_9PROT Length = 118 Score = 105 bits (261), Expect = 6e-22, Method: Composition-based stats. Identities = 39/117 (33%), Positives = 64/117 (54%), Gaps = 1/117 (0%) Query: 32 MNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAAN-FPDPVDRAAQEEEFSLELRNRD 90 M + +L +++ILE R QL ++ +V + + N D D A+ + S+E Sbjct: 1 MKKNELKFYKKILEEKREQLIANINSSVNEISELRENKAADDFDVASMNTDLSIEYSLNV 60 Query: 91 RERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAEIREK 147 ++K +IE LK++E+ +G CESCG +I + RL+ P A LCI CK AE + + Sbjct: 61 NQQKAFLEIESALKRIENGTYGLCESCGEQISLERLKVNPEARLCISCKEQAEKQNR 117 >UniRef50_B3EAN1 Transcriptional regulator, TraR/DksA family n=8 Tax=Geobacter RepID=B3EAN1_GEOLS Length = 218 Score = 104 bits (260), Expect = 8e-22, Method: Composition-based stats. Identities = 35/149 (23%), Positives = 67/149 (44%), Gaps = 3/149 (2%) Query: 3 EGQNRKTSSLSILAIAGVEPYQEKPGEEYMNEAQLAHFRRILEAWRNQLRDEVDRTVTHM 62 + K ++ A V P + + + ++IL A + Q E+ R++ Sbjct: 49 KAAEPKKKVATVPAEPSVPPTAKTVEASVASGGKWKEIQQILLAMKEQTLLEIKRSIKKG 108 Query: 63 QDEA---ANFPDPVDRAAQEEEFSLELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGV 119 + + D D+A+ E + L L DRER+ + I++ L ++ + ++G CE C Sbjct: 109 SEVSVGEEPTGDIYDQASSERDRELGLLLNDREREKLHSIDEALLRIAEGEYGICEECDE 168 Query: 120 EIGIRRLEARPTADLCIDCKTLAEIREKQ 148 +I + RL+ P C+ CK+ E + Q Sbjct: 169 DIPMGRLKVLPFTRHCVKCKSDLEKFQAQ 197 >UniRef50_C9S0U4 Transcriptional regulator, TraR/DksA family n=14 Tax=Bacillaceae RepID=C9S0U4_GEOSY Length = 269 Score = 104 bits (260), Expect = 8e-22, Method: Composition-based stats. Identities = 29/125 (23%), Positives = 51/125 (40%), Gaps = 10/125 (8%) Query: 35 AQLAHFRRILEAWRNQLRDEVDR----------TVTHMQDEAANFPDPVDRAAQEEEFSL 84 QLA R L + + D + + + + A+ P D A + E Sbjct: 5 EQLAALRSRLLDMKRETEDRLKQNDHFGMIRSHAHDAVGELASYDNHPADEATELYEREK 64 Query: 85 ELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAEI 144 +L ++ + +++IE+ L + D +G C CG I RLEA PT C + + Sbjct: 65 DLALKEHAERELREIERALGAIADGTYGTCRVCGRPIPYERLEALPTTLYCREHSPDQTV 124 Query: 145 REKQM 149 +K+ Sbjct: 125 SQKRP 129 >UniRef50_C7QCE7 Transcriptional regulator, TraR/DksA family n=1 Tax=Catenulispora acidiphila DSM 44928 RepID=C7QCE7_CATAD Length = 275 Score = 104 bits (260), Expect = 9e-22, Method: Composition-based stats. Identities = 38/140 (27%), Positives = 67/140 (47%), Gaps = 7/140 (5%) Query: 11 SLSILAIAGVEPYQEKPGEEYMNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAANFP 70 S ++ + G+ PY+ GE+ ++ + LE +LR E+ T + D + Sbjct: 138 SQTMAGVGGLPPYRT--GEDPWTPEEVGELQAELEGDAARLRREISTAETGIADLLRDSG 195 Query: 71 -----DPVDRAAQEEEFSLELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRR 125 D D + E E+ + R+++++ E+ L ++ + +G CESCG +G R Sbjct: 196 EGAGDDQADAGTKNFEREHEMAIANNAREMLQQTERALARLAADTYGVCESCGEPVGKYR 255 Query: 126 LEARPTADLCIDCKTLAEIR 145 L+A P A LC+ CK E R Sbjct: 256 LQAFPRATLCMSCKQKQERR 275 >UniRef50_Q3A0W2 DnaK suppressor protein n=2 Tax=Proteobacteria RepID=Q3A0W2_PELCD Length = 118 Score = 104 bits (259), Expect = 1e-21, Method: Composition-based stats. Identities = 57/116 (49%), Positives = 74/116 (63%) Query: 32 MNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAANFPDPVDRAAQEEEFSLELRNRDR 91 M++ L F+ ILE+ L + +TV+ M D+ +NFPDP DRA+ E + + ELR RDR Sbjct: 1 MDQEALKEFKAILESQLEALLRDAGKTVSEMTDDQSNFPDPTDRASLESDRNFELRIRDR 60 Query: 92 ERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAEIREK 147 ERKLI KI + L+++E FG CE C IG RL ARP LCIDCKT E +EK Sbjct: 61 ERKLIMKIRQALERIEQGTFGECECCEEPIGAERLRARPVTTLCIDCKTEQERKEK 116 >UniRef50_B8FT18 Transcriptional regulator, TraR/DksA family n=2 Tax=Desulfitobacterium hafniense RepID=B8FT18_DESHD Length = 222 Score = 104 bits (259), Expect = 1e-21, Method: Composition-based stats. Identities = 30/122 (24%), Positives = 53/122 (43%), Gaps = 5/122 (4%) Query: 32 MNEAQLAHFRRILEAWRNQLRDEV-----DRTVTHMQDEAANFPDPVDRAAQEEEFSLEL 86 M+ ++ A L+ + + + + + P D A + E S ++ Sbjct: 1 MDTSKYARLIEQLKKDKEEAWATAQGLITGDMRESIAELSLIDNHPADIATEVYERSRDV 60 Query: 87 RNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAEIRE 146 DR I+ I+ L++ E+ +G CE C EI + RLEA P +C +C L E+ E Sbjct: 61 AIHDRLHHRIQAIDSALQRYEEGKYGLCEHCQKEIPLGRLEALPFTTVCTECSRLEEMEE 120 Query: 147 KQ 148 + Sbjct: 121 QH 122 >UniRef50_UPI0001788757 transcriptional regulator, TraR/DksA family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001788757 Length = 187 Score = 103 bits (258), Expect = 1e-21, Method: Composition-based stats. Identities = 25/127 (19%), Positives = 57/127 (44%), Gaps = 9/127 (7%) Query: 32 MNEAQLAHFRRILEAWRNQLRDEVDR---------TVTHMQDEAANFPDPVDRAAQEEEF 82 M + Q + R+ L + + +L ++++ + +A P D + E Sbjct: 4 MTKQQYSELRQRLLSDKERLENQLESREDTNKDLSLRDSTGELSAADNHPADVGTEVFER 63 Query: 83 SLELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLA 142 +L ++ + +++I+ L++++ ++G C CG EI RLEA P C++ Sbjct: 64 GRDLAIQETLERELEQIDAALQRMDQGEYGTCAECGREIPYERLEALPYTAYCLEHTPRK 123 Query: 143 EIREKQM 149 +I + + Sbjct: 124 DINDNRP 130 >UniRef50_B1I4J4 Transcriptional regulator, TraR/DksA family n=1 Tax=Candidatus Desulforudis audaxviator MP104C RepID=B1I4J4_DESAP Length = 212 Score = 103 bits (257), Expect = 2e-21, Method: Composition-based stats. Identities = 32/129 (24%), Positives = 61/129 (47%), Gaps = 8/129 (6%) Query: 28 GEEYMNEAQLAHFRRILEAWRNQLRDEVDR--------TVTHMQDEAANFPDPVDRAAQE 79 G + ++ A+L R L R ++ E++ + + + P D A++ Sbjct: 2 GSDKVDSAKLEQLRVRLLRERAAVQREINAIQQTMDVALEDTIGELSTYDNHPADIASET 61 Query: 80 EEFSLELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCK 139 E S + R+ R + +E L +++ +G C+ CGV+I + RLEA P C +CK Sbjct: 62 FERSKDFALRENARFRLLAVEDALARMDRGTYGRCDECGVDIDLERLEAVPFTTKCRECK 121 Query: 140 TLAEIREKQ 148 AE ++++ Sbjct: 122 ARAEGKDER 130 >UniRef50_A3DD29 Transcriptional regulators, TraR/DksA family n=5 Tax=Clostridium RepID=A3DD29_CLOTH Length = 212 Score = 103 bits (257), Expect = 2e-21, Method: Composition-based stats. Identities = 32/121 (26%), Positives = 55/121 (45%), Gaps = 9/121 (7%) Query: 32 MNEAQLAHFRRILEAWRNQLRDEVD---------RTVTHMQDEAANFPDPVDRAAQEEEF 82 M++++ FR++L + + ++ + V + + P + Q + Sbjct: 1 MDDSKKEFFRQLLVEEKKNIERTINLMEEHGISKQNVESADELSGYDNHPAELGTQLFQT 60 Query: 83 SLELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLA 142 L + E +L++ I + L K++ FG CE CG EI RLEA P LCIDC+ Sbjct: 61 ELNNALKVHEERLLEDINEALTKMDKGSFGKCELCGKEIDEERLEALPYTRLCIDCENAK 120 Query: 143 E 143 E Sbjct: 121 E 121 >UniRef50_A7H9X1 Transcriptional regulator, TraR/DksA family n=7 Tax=Cystobacterineae RepID=A7H9X1_ANADF Length = 120 Score = 103 bits (256), Expect = 2e-21, Method: Composition-based stats. Identities = 47/120 (39%), Positives = 66/120 (55%), Gaps = 1/120 (0%) Query: 32 MNEAQLAHFRRILEAWRNQLRDEVDRT-VTHMQDEAANFPDPVDRAAQEEEFSLELRNRD 90 MN+ L F+ +LE + QL +T + + PD +D A+ E S+ R RD Sbjct: 1 MNKKDLKKFKTMLEESKRQLLLSAKKTLTEEASFDTDDLPDEIDLASSEYTQSMIFRLRD 60 Query: 91 RERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAEIREKQMA 150 RE+ L+ KI+K L ++E+ FG CE C EI ++RLEARP LCI CK E +EK Sbjct: 61 REKFLLAKIDKALARIENGTFGICERCEEEISVKRLEARPVTTLCIRCKEEQEQKEKSFG 120 >UniRef50_B2A2J0 Transcriptional regulator, TraR/DksA family n=1 Tax=Natranaerobius thermophilus JW/NM-WN-LF RepID=B2A2J0_NATTJ Length = 216 Score = 102 bits (255), Expect = 3e-21, Method: Composition-based stats. Identities = 28/115 (24%), Positives = 54/115 (46%), Gaps = 8/115 (6%) Query: 32 MNEAQLAHFRRILEAWRNQLR--------DEVDRTVTHMQDEAANFPDPVDRAAQEEEFS 83 M + ++ +R+ L + + L D ++ + ++ P D +++ E Sbjct: 1 MTDQEIEKYRQKLLSIKADLEKHEAEGQHDNRTSIRDNVSELSSYDNHPGDLGSEQYELE 60 Query: 84 LELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDC 138 + + + +++IE L+K+ + D+G CESCG EI RL+A P CI C Sbjct: 61 KDTTLSNLREQKLREIEIALEKIANGDYGKCESCGKEINNERLDAVPYTRYCISC 115 >UniRef50_B8CWL7 Transcriptional regulator, TraR/DksA family n=1 Tax=Halothermothrix orenii H 168 RepID=B8CWL7_HALOH Length = 228 Score = 102 bits (254), Expect = 4e-21, Method: Composition-based stats. Identities = 31/123 (25%), Positives = 56/123 (45%), Gaps = 8/123 (6%) Query: 32 MNEAQLAHFRRILEAWRNQLRDEV--------DRTVTHMQDEAANFPDPVDRAAQEEEFS 83 M+ + +R++L +N L E+ + ++ P D+ + + Sbjct: 1 MDRTKEKKYRQLLINEKNSLLHELKHFSDDEFASVKDSTGELSSYDNHPADQGSNTYDRE 60 Query: 84 LELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAE 143 + RD + L+ K+E L ++E+ ++G CE CG EI RLE P A LC C+ E Sbjct: 61 KDRGLRDNAQVLLNKVENALNRLEEGNYGLCEKCGQEIREERLETIPYATLCERCQAKEE 120 Query: 144 IRE 146 ++ Sbjct: 121 GKD 123 >UniRef50_B0SIE7 DnaK suppressor protein n=6 Tax=Leptospira RepID=B0SIE7_LEPBA Length = 154 Score = 102 bits (254), Expect = 4e-21, Method: Composition-based stats. Identities = 24/133 (18%), Positives = 56/133 (42%), Gaps = 1/133 (0%) Query: 20 VEPYQEKPGEEYMNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEA-ANFPDPVDRAAQ 78 +P + E+ +++ + R +L+ + L ++++ D D A++ Sbjct: 2 PKPAAKSSAEKGVDKKFIEEVRELLQEKKESLLIKLNQWEDTSSPSGLKEMGDIADIASE 61 Query: 79 EEEFSLELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDC 138 +L + E + +++IE L+K+E+ +G CE +I + RL+A P ++ Sbjct: 62 LNSEALTSVLTENEIETLREIELALEKIENGTYGICEGTKKKIPLARLKAIPWTRFTVEF 121 Query: 139 KTLAEIREKQMAG 151 + G Sbjct: 122 AEQMAKSRNRAGG 134 >UniRef50_Q97H97 General stress protein, DnaK suppressor DskA, YTEA B.subtilis ortholog n=1 Tax=Clostridium acetobutylicum RepID=Q97H97_CLOAB Length = 200 Score = 102 bits (253), Expect = 4e-21, Method: Composition-based stats. Identities = 30/120 (25%), Positives = 53/120 (44%), Gaps = 9/120 (7%) Query: 32 MNEAQLAHFRRILEAWRNQLRDEVDRTVTH---------MQDEAANFPDPVDRAAQEEEF 82 M++ +L +F+ L R L + +++ + + + P D A++ + Sbjct: 1 MDKKKLDYFKNKLMFERKSLMELIEQMRKNDTIDSKMEIASELSYYDNHPSDLASEFNDI 60 Query: 83 SLELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLA 142 + R E L+ KI + KVE +G CE CG I RLE P A+ C++C+ Sbjct: 61 QRGMAFRKNEEALLNKIGNAIDKVEHGGYGICEVCGKPISEERLEFVPYAENCVECQNKL 120 >UniRef50_C6PE95 Transcriptional regulator, TraR/DksA family n=1 Tax=Thermoanaerobacterium thermosaccharolyticum DSM 571 RepID=C6PE95_CLOTS Length = 207 Score = 101 bits (252), Expect = 6e-21, Method: Composition-based stats. Identities = 28/125 (22%), Positives = 56/125 (44%), Gaps = 11/125 (8%) Query: 32 MNEAQLAHFRRILEAWRNQLRDEVDRTVTH-----------MQDEAANFPDPVDRAAQEE 80 M++ +L HFR+ L +N + ++ + Q+ + P D ++ Sbjct: 1 MDDEKLEHFRKKLIEEKNNILHTLNEMDDNDGTGRMAEREYYQELSLADNHPADIGSEVY 60 Query: 81 EFSLELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKT 140 E +D E+ ++++I+ L ++ +G C C EI + RLEA P LC +C Sbjct: 61 EIEKNYALKDNEQHVLRQIDDALLRMVKGQYGICNHCHKEIELDRLEALPYTSLCANCAK 120 Query: 141 LAEIR 145 +++ Sbjct: 121 NNDLK 125 >UniRef50_B3QWB1 Transcriptional regulator, TraR/DksA family n=1 Tax=Chloroherpeton thalassium ATCC 35110 RepID=B3QWB1_CHLT3 Length = 208 Score = 101 bits (252), Expect = 7e-21, Method: Composition-based stats. Identities = 29/148 (19%), Positives = 60/148 (40%), Gaps = 7/148 (4%) Query: 1 MQEGQNRKTSSLSILAIAGVEPYQEKPGEEYMNEAQLAHFRRILEAWRNQLRDEVDRTVT 60 M + +S+ S+ Q++ Y++ +L HF ++L R ++ +++ + Sbjct: 60 MSAKTRKVSSAPSMENENSKHEEQDRLSVTYLSAKELKHFEQLLLKKREEVLRDLEILKS 119 Query: 61 HMQDEAANFP-------DPVDRAAQEEEFSLELRNRDRERKLIKKIEKTLKKVEDEDFGY 113 DE D + + R+ K + I+K L++++++ +G Sbjct: 120 SFSDENEEDSVNSSYSMHMADHGTETMDREQRFLFISRDEKYLSYIDKALERIKNKTYGI 179 Query: 114 CESCGVEIGIRRLEARPTADLCIDCKTL 141 C G I RLEA P + I+ K Sbjct: 180 CAISGKPIPKARLEAVPHTGVRIEYKKR 207 >UniRef50_C6J3C7 DnaK suppressor protein n=2 Tax=Bacillales RepID=C6J3C7_9BACL Length = 245 Score = 101 bits (251), Expect = 9e-21, Method: Composition-based stats. Identities = 26/117 (22%), Positives = 51/117 (43%), Gaps = 9/117 (7%) Query: 30 EYMNEAQLAHFRRILEAWRNQLRDEV---------DRTVTHMQDEAANFPDPVDRAAQEE 80 ++ +AQLA L+ ++ L +++ + + + + P D ++ Sbjct: 2 PHLTKAQLAELTAKLQETKSALTEQLSDNDHYGMNESMRDNTNELSQIDNHPGDLGSEVY 61 Query: 81 EFSLELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCID 137 E +L + + ++E L+++ED +GYC +CG I RL A P C D Sbjct: 62 ERGKDLALAEHHELHLARVEDALERIEDGSYGYCATCGKPISYERLRAIPETAYCKD 118 >UniRef50_A8EWK7 DnaK suppressor protein DksA n=1 Tax=Arcobacter butzleri RM4018 RepID=A8EWK7_ARCB4 Length = 123 Score = 101 bits (251), Expect = 9e-21, Method: Composition-based stats. Identities = 29/115 (25%), Positives = 57/115 (49%), Gaps = 1/115 (0%) Query: 33 NEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAA-NFPDPVDRAAQEEEFSLELRNRDR 91 N+ Q+ + IL + + V+ + ++ + D +D A + +E + Sbjct: 3 NKTQIDELKAILLERKENILSHVNSSRENIDQLKEQDINDDLDYAELVSDSFIEGMITNH 62 Query: 92 ERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAEIRE 146 + +K+IE+ LKK+ +G C+ CG+ I + RL+A+P A C +C+T+ E Sbjct: 63 QLDELKQIEEALKKITLGTYGICDMCGINIPLGRLKAKPFAKFCTECRTVYEQEN 117 >UniRef50_C1I8K1 Putative uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=C1I8K1_9CLOT Length = 204 Score = 101 bits (251), Expect = 9e-21, Method: Composition-based stats. Identities = 27/117 (23%), Positives = 55/117 (47%), Gaps = 9/117 (7%) Query: 32 MNEAQLAHFRRILEAWRNQLRDEVDRTVTH---------MQDEAANFPDPVDRAAQEEEF 82 MN+ +L +++ L + ++ D +++ + + + P D A++ E Sbjct: 1 MNKEELTYYKNKLNQEKKRITDLINQLDDNGVTRFNAEVASELSFYDNHPSDIASETFEV 60 Query: 83 SLELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCK 139 ER L+ KI+ ++ +++ +G C+ CG EI RL+ P A CI+C+ Sbjct: 61 EKGRALEANERALLDKIDDAVRAIDEGSYGKCQKCGKEIDKERLDFLPYALNCIECE 117 >UniRef50_D2L9K5 Transcriptional regulator, TraR/DksA family n=2 Tax=Desulfovibrio RepID=D2L9K5_9DELT Length = 120 Score = 100 bits (250), Expect = 1e-20, Method: Composition-based stats. Identities = 42/115 (36%), Positives = 66/115 (57%) Query: 32 MNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAANFPDPVDRAAQEEEFSLELRNRDR 91 M+ + FR +L + + + + T+ M D + DP DRA E + + LR RDR Sbjct: 1 MDSKDVEFFRELLNGMLHDILKKGEETIEDMTDTVEVYADPADRATAESDRAFTLRLRDR 60 Query: 92 ERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAEIRE 146 ER+LIKKI++ L ++++ +G C CG +I + R++ARP LCI CK+ E E Sbjct: 61 ERRLIKKIKEALDRIDEGTYGECVECGEDISVARMKARPVTTLCIKCKSRQEADE 115 >UniRef50_Q182T9 Putative general stress protein n=7 Tax=Clostridium RepID=Q182T9_CLOD6 Length = 163 Score = 100 bits (249), Expect = 2e-20, Method: Composition-based stats. Identities = 22/126 (17%), Positives = 44/126 (34%), Gaps = 15/126 (11%) Query: 32 MNEAQLAHFRRILEAWRNQLRDEVDRTVT---------------HMQDEAANFPDPVDRA 76 M + ++ L R L + V+ + ++ D Sbjct: 1 MLKMDTKKYKDKLLKERENLTNLVEDMKDNTLFGDTTKHTSEKYSSGELSSYDNHIGDMG 60 Query: 77 AQEEEFSLELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCI 136 +++ + E + +I+ L K+E+ +G C+ C +I + RL+ P LC Sbjct: 61 TDLYMQNMQNSLINHEEGRLYQIDLALSKIENGTYGICDLCHNQIDLERLDILPDTSLCN 120 Query: 137 DCKTLA 142 DC Sbjct: 121 DCAKKE 126 >UniRef50_A8MH72 Transcriptional regulator, TraR/DksA family n=1 Tax=Alkaliphilus oremlandii OhILAs RepID=A8MH72_ALKOO Length = 226 Score = 100 bits (249), Expect = 2e-20, Method: Composition-based stats. Identities = 24/121 (19%), Positives = 53/121 (43%), Gaps = 10/121 (8%) Query: 32 MNEAQLAHFRRILEAWRNQLRDEVD----------RTVTHMQDEAANFPDPVDRAAQEEE 81 M + +L +FR L + Q+ ++ + ++ ++ P D ++ Sbjct: 1 MEKKKLEYFRGKLLKEKKQVMKTIELMKSHYPTDASMKEYTEELSSYDNHPADLGSEMFM 60 Query: 82 FSLELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTL 141 ++ + E+ + +I+ ++K+ + +G C+ CG +I RLE P + CIDC Sbjct: 61 MEMQNNLENHEKNRLLEIDDAVQKINEGTYGNCQICGNKILEERLEIMPASITCIDCAEK 120 Query: 142 A 142 Sbjct: 121 E 121 >UniRef50_D2L3E3 Transcriptional regulator, TraR/DksA family n=2 Tax=Desulfovibrio RepID=D2L3E3_9DELT Length = 131 Score = 100 bits (248), Expect = 2e-20, Method: Composition-based stats. Identities = 43/116 (37%), Positives = 66/116 (56%) Query: 32 MNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAANFPDPVDRAAQEEEFSLELRNRDR 91 M + FR++L L + T+ + E A F D DRA E + L + R+R Sbjct: 1 MGHLDVDRFRQVLRDMLETLNGQSRDTLDVLAREVAAFADVADRATAESDRHLTILMRER 60 Query: 92 ERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAEIREK 147 +R+LI +I + L +V+D D+G C+ CG EIG+ RL A+PTA LC+ CK++ E + Sbjct: 61 DRQLIGEINEALARVKDGDYGICQECGEEIGLARLRAQPTATLCVHCKSMLEEMGR 116 >UniRef50_C0GJQ4 Transcriptional regulator, TraR/DksA family n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GJQ4_9FIRM Length = 203 Score = 100 bits (248), Expect = 2e-20, Method: Composition-based stats. Identities = 28/119 (23%), Positives = 58/119 (48%), Gaps = 9/119 (7%) Query: 34 EAQLAHFRRILEAWRNQLRDEVD---------RTVTHMQDEAANFPDPVDRAAQEEEFSL 84 + L R LE + L ++ + Q+ + P D ++ E + Sbjct: 2 DKNLIRHRLQLEQLKKDLLEQTEFTEGMQEHEGLRDATQELSVIDNHPADVGSENYERAK 61 Query: 85 ELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAE 143 ++ ++ + ++ K+E+ L+K++++ +G CE+CG I RL+A P A+ C+ CK +E Sbjct: 62 DISLHEKNQMVLDKVEEALEKLDNDIYGMCENCGKPIPEERLDALPYAEFCVQCKKKSE 120 >UniRef50_Q1IJ15 Transcriptional regulators, TraR/DksA family n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1IJ15_ACIBL Length = 121 Score = 99.7 bits (247), Expect = 2e-20, Method: Composition-based stats. Identities = 33/116 (28%), Positives = 55/116 (47%), Gaps = 1/116 (0%) Query: 32 MNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAANFP-DPVDRAAQEEEFSLELRNRD 90 M++ ++ ++ LE R+ LR + +T ++ + D DRA Sbjct: 1 MDKKKIDAIKQQLEKRRDDLRATMVKTAADGREANEDTAQDIADRATNSYTKEFLFTQSA 60 Query: 91 RERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAEIRE 146 +R L++ +E L ++ + +G C SCG EI +RLEA P A CI C+ E E Sbjct: 61 NDRNLLQMVEGALIRIGEGTYGECVSCGSEINSKRLEAVPWARYCIGCQEKIEKGE 116 >UniRef50_Q9S2X6 Putative DNA-binding protein n=2 Tax=Streptomyces RepID=Q9S2X6_STRCO Length = 239 Score = 99.3 bits (246), Expect = 3e-20, Method: Composition-based stats. Identities = 35/131 (26%), Positives = 62/131 (47%), Gaps = 5/131 (3%) Query: 20 VEPYQEKPGEEYMNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAANFPD-----PVD 74 +PGEE ++ R L++ ++LR E+D + +Q + D D Sbjct: 108 PGDLAVRPGEEPWTPQEVEEARGELQSEADRLRTEIDTSERSLQGMMRDSGDGAGDDEAD 167 Query: 75 RAAQEEEFSLELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADL 134 ++ EL R+++ + E+ L +++ +G CE+CG IG R++A P A L Sbjct: 168 TGSKNITREHELALAATAREVLSQTERALDRLDAGTYGLCENCGNPIGKARMQAFPRATL 227 Query: 135 CIDCKTLAEIR 145 C++CK E R Sbjct: 228 CVECKQKQERR 238 >UniRef50_A1VXK8 DnaK suppressor protein, putative n=15 Tax=Campylobacter RepID=A1VXK8_CAMJJ Length = 120 Score = 99.3 bits (246), Expect = 4e-20, Method: Composition-based stats. Identities = 31/118 (26%), Positives = 61/118 (51%), Gaps = 1/118 (0%) Query: 32 MNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAANFP-DPVDRAAQEEEFSLELRNRD 90 M + ++ +F+ ILE + + + + ++ + P D VD + E ++ Sbjct: 1 MKKNEIQNFKNILEERKKAILENLQSNSNEIEALHNSVPSDSVDFSVIETGSQIDFAIST 60 Query: 91 RERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAEIREKQ 148 ++ + +IE +L K+++ +G CESC EI +RL+ +P A CI C+ +AE +K Sbjct: 61 NLKEELIEIEDSLDKIKNGTYGICESCDDEIDSQRLKVKPHARYCITCRQIAEQGKKH 118 >UniRef50_Q8ESP2 Hypothetical conserved protein n=1 Tax=Oceanobacillus iheyensis RepID=Q8ESP2_OCEIH Length = 224 Score = 98.9 bits (245), Expect = 4e-20, Method: Composition-based stats. Identities = 25/126 (19%), Positives = 48/126 (38%), Gaps = 9/126 (7%) Query: 33 NEAQLAHFRRILEAWRNQLRDEVDR---------TVTHMQDEAANFPDPVDRAAQEEEFS 83 ++ Q + L ++ L ++V R + + + P D + E Sbjct: 3 SKQQQLQCKEALLQRQSTLIEQVQRHTFGLDVEFAREDVGELSNYDNHPGDTGTELFERE 62 Query: 84 LELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAE 143 ++ ++ K ++ I L +E+ +G C CG +I RLEA PT D C+ Sbjct: 63 KDIALQEHTEKELEDINAALHAIEEGTYGICTVCGEDIPHERLEAIPTTDRCVKHANEGG 122 Query: 144 IREKQM 149 + Sbjct: 123 RERYRP 128 >UniRef50_A0RK79 DnaK suppressor protein n=74 Tax=Bacillus RepID=A0RK79_BACAH Length = 243 Score = 98.9 bits (245), Expect = 5e-20, Method: Composition-based stats. Identities = 29/117 (24%), Positives = 49/117 (41%), Gaps = 8/117 (6%) Query: 32 MNEAQLAHFRRILEAWRNQLRDEVDRTVTH--------MQDEAANFPDPVDRAAQEEEFS 83 + Q+ F+ +LE + +L + + + ++ P D A + E Sbjct: 2 LTPQQINQFKSVLEKQKQELEQTIQTHENEDRASERESVGELSSYDNHPADMATELYERE 61 Query: 84 LELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKT 140 + + K ++ + L+K+E +G CE G EI RLEA PTA CI T Sbjct: 62 KDFGLIELWHKQLEDTKHALQKIEAGTYGICEVSGEEIPFERLEAMPTATTCIQHAT 118 >UniRef50_A9G9K0 Putative dnaK suppressor protein n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9G9K0_SORC5 Length = 167 Score = 98.6 bits (244), Expect = 5e-20, Method: Composition-based stats. Identities = 38/152 (25%), Positives = 66/152 (43%), Gaps = 5/152 (3%) Query: 5 QNRKTSSLSILAIAGVE-----PYQEKPGEEYMNEAQLAHFRRILEAWRNQLRDEVDRTV 59 +TS+ + A+ P + + QL R+ LE R L +D Sbjct: 15 ARPETSATTAAAMPRPPVRRAAPETDDSDLPDLTPEQLGELRQALEERRASLVANIDERQ 74 Query: 60 THMQDEAANFPDPVDRAAQEEEFSLELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGV 119 +D + D +D A E SL + +R+ +++ +I++ L K+++ +G CE G Sbjct: 75 HAERDISREVGDEMDEANAEGATSLTSKLLERDVRVLAEIDRALAKMKEGSYGMCEGTGE 134 Query: 120 EIGIRRLEARPTADLCIDCKTLAEIREKQMAG 151 IG RRL+ RP A + + E E+ G Sbjct: 135 PIGYRRLKLRPWARYSVAYQEQIEREERTGGG 166 >UniRef50_UPI0001AEC064 DnaK suppressor protein n=1 Tax=Alteromonas macleodii ATCC 27126 RepID=UPI0001AEC064 Length = 140 Score = 98.6 bits (244), Expect = 5e-20, Method: Composition-based stats. Identities = 49/138 (35%), Positives = 71/138 (51%), Gaps = 1/138 (0%) Query: 14 ILAIAGVEPYQEKPGEEYMNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAANFPDPV 73 + E ++YMN+ QL F+ +L + Q ++ + D V Sbjct: 1 MSKTLTKEALLAASEDDYMNDEQLEFFKELLNDLKQQTMAHIEEMKASLSQPPE-INDEV 59 Query: 74 DRAAQEEEFSLELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTAD 133 DRA EEE L LR DRERKL+ KI+K+L++++D+ FGYC G IGI RL RP ++ Sbjct: 60 DRAQYEEESRLSLRILDRERKLLPKIDKSLRRIKDKSFGYCLETGEPIGIPRLLIRPVSE 119 Query: 134 LCIDCKTLAEIREKQMAG 151 C D K + E RE+ Sbjct: 120 YCADVKMVNEGREQHYYS 137 >UniRef50_B9L783 Transcriptional regulator, TraR/DksA family n=1 Tax=Nautilia profundicola AmH RepID=B9L783_NAUPA Length = 117 Score = 98.6 bits (244), Expect = 6e-20, Method: Composition-based stats. Identities = 29/117 (24%), Positives = 54/117 (46%), Gaps = 1/117 (0%) Query: 32 MNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAA-NFPDPVDRAAQEEEFSLELRNRD 90 MN + ++ +L + +L ++ ++D D D AA + + + Sbjct: 1 MNMKKYHLYKEMLLMRKAELEKILNSLSDEIKDINKCEINDEADFAAASMDSGRDYQIYI 60 Query: 91 RERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAEIREK 147 ++K +++I LKK+++ FG CE C I RL+ +P A CI C+ + E K Sbjct: 61 NQKKELEEINDALKKIDEGTFGICEMCEDPIQEARLKIKPYAKYCIICREIIEKEGK 117 >UniRef50_B0TGP7 Putative uncharacterized protein n=1 Tax=Heliobacterium modesticaldum Ice1 RepID=B0TGP7_HELMI Length = 238 Score = 98.6 bits (244), Expect = 6e-20, Method: Composition-based stats. Identities = 29/113 (25%), Positives = 52/113 (46%), Gaps = 9/113 (7%) Query: 43 ILEAWRNQLRDEV---------DRTVTHMQDEAANFPDPVDRAAQEEEFSLELRNRDRER 93 L A +RD++ + +Q+ + P D ++ E +L RDR Sbjct: 11 RLNAMETDIRDQLTHMTQDALGESMGESIQELSLYDNHPADVGSEVYERGKDLATRDRFS 70 Query: 94 KLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAEIRE 146 + + +I K +++ + +G CE C +I R+ A PTA LCI+C++ E Sbjct: 71 RELDEIAKAKRRISEGIYGICERCHQKIPDARMAAMPTATLCIECQSHEEELH 123 >UniRef50_B1ZV03 Transcriptional regulator, TraR/DksA family n=2 Tax=Opitutaceae RepID=B1ZV03_OPITP Length = 297 Score = 98.6 bits (244), Expect = 6e-20, Method: Composition-based stats. Identities = 25/151 (16%), Positives = 53/151 (35%), Gaps = 12/151 (7%) Query: 10 SSLSILAIAGVEPYQEK---PGEEYMNEAQLAHFRRILEAWRNQLRDEVD---------R 57 + S+ I G P + + P + + + ++L R QL + ++ Sbjct: 121 KAASLSDILGFNPKRSRVTAPDDVEKVPEKYRRYYKLLLDLRKQLTEGIELHSEETLKRS 180 Query: 58 TVTHMQDEAANFPDPVDRAAQEEEFSLELRNRDRERKLIKKIEKTLKKVEDEDFGYCESC 117 + D ++ D + L E++ + +I+ +K++ D +G CE Sbjct: 181 SKEDSGDLSSYGQHMADAGTDTFDRDFALSLVSSEQEALTEIDAAIKRIHDGTYGICEIT 240 Query: 118 GVEIGIRRLEARPTADLCIDCKTLAEIREKQ 148 I RL A P + + E + Sbjct: 241 QKPIAKERLLAVPFTRYSAEAQKDLEKNRYR 271 >UniRef50_Q021M5 Transcriptional regulator, TraR/DksA family n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q021M5_SOLUE Length = 143 Score = 98.2 bits (243), Expect = 6e-20, Method: Composition-based stats. Identities = 29/120 (24%), Positives = 51/120 (42%), Gaps = 3/120 (2%) Query: 27 PGEEYMNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAANFPDPVDRAAQEEEFSLEL 86 M +L HFR +L A + D + N D +DR E + + Sbjct: 14 KAVTPMTRTELKHFRSVLHAMLDGTEDTLRTLDDIA---IQNVADSLDRIQHATEREMAI 70 Query: 87 RNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAEIRE 146 R + + ++ + L+++ + +G C C EI +RL+A P C+DC+ A+ R Sbjct: 71 RRIELDFSKVQSVRSALQRIAEGTYGVCSECDNEIPGKRLKAVPWTPYCLDCQDSADRRR 130 >UniRef50_C6Q1P6 Transcriptional regulator, TraR/DksA family n=13 Tax=Clostridium RepID=C6Q1P6_9CLOT Length = 201 Score = 98.2 bits (243), Expect = 7e-20, Method: Composition-based stats. Identities = 30/118 (25%), Positives = 53/118 (44%), Gaps = 9/118 (7%) Query: 32 MNEAQLAHFRRILEAWRNQL---------RDEVDRTVTHMQDEAANFPDPVDRAAQEEEF 82 MN +L HFR+ LE + ++ + ++ + + P D A + + Sbjct: 1 MNNERLEHFRKKLELEKKRVYSLLKQMEENETINSNAELATELSFYDNHPSDIATEIFDK 60 Query: 83 SLELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKT 140 + + E +IKKIE +L ++ +G C CG +I RLE P D C++C+ Sbjct: 61 ERGIAFKGNELSIIKKIENSLSNIDKGTYGKCSICGKDIKEERLEFIPYTDHCVECQK 118 >UniRef50_Q0EXX5 Transcriptional regulators, TraR/DksA family protein n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0EXX5_9PROT Length = 123 Score = 98.2 bits (243), Expect = 7e-20, Method: Composition-based stats. Identities = 47/119 (39%), Positives = 77/119 (64%), Gaps = 1/119 (0%) Query: 30 EYMNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQD-EAANFPDPVDRAAQEEEFSLELRN 88 + + QLA F + L W+ +L V M + E +FPDP D+A+ E + + +L+ Sbjct: 1 MALTKKQLADFEKQLMDWKAELEIGQSENVQAMTEQEQTSFPDPTDQASMEIDRNFDLKI 60 Query: 89 RDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAEIREK 147 +DRER+LIKKI++ ++++++ +FG C++CG I ++RLEARP LCI+CKT E E+ Sbjct: 61 KDRERRLIKKIDQAIERIQNGEFGECDACGGPISVKRLEARPVTTLCIECKTAQEQEER 119 >UniRef50_Q01TC0 Transcriptional regulator, TraR/DksA family n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q01TC0_SOLUE Length = 136 Score = 98.2 bits (243), Expect = 8e-20, Method: Composition-based stats. Identities = 27/108 (25%), Positives = 50/108 (46%), Gaps = 1/108 (0%) Query: 37 LAHFRRILEAWRNQLRDEVDRTVTHMQDEAAN-FPDPVDRAAQEEEFSLELRNRDRERKL 95 + HF+ L + R +L D + R ++ + DP+DR+ + L N + + Sbjct: 18 VEHFKEKLLSKRRELVDAIGRAEQEVRTASEGEVGDPLDRSVDDTAADEGLHNSSVDSET 77 Query: 96 IKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAE 143 +++++ L+++E +G C CG I RLEA P C + E Sbjct: 78 LQQVDDALRRIEQGSYGKCVICGKPIEPARLEAIPWTPYCKADQERLE 125 >UniRef50_B5JMU6 Putative uncharacterized protein n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JMU6_9BACT Length = 280 Score = 97.8 bits (242), Expect = 8e-20, Method: Composition-based stats. Identities = 26/157 (16%), Positives = 53/157 (33%), Gaps = 13/157 (8%) Query: 2 QEGQNRKTSSLSILAIAGVEPYQEKPGEEYMNEAQ----LAHFRRILEAWRNQLRDEVDR 57 + Q + + S+ I G P P + +E F +L R+ +++ ++ Sbjct: 93 AKKQKQSFGAASLADILGYNPAAPTPTVKKRDEKDVPAKYKKFYALLIELRDHVKNGLNT 152 Query: 58 TVTHM---------QDEAANFPDPVDRAAQEEEFSLELRNRDRERKLIKKIEKTLKKVED 108 D + D + L E+ +++IE+ + ++ Sbjct: 153 HAEETLKRSSKDDSGDLSGYSQHMADAGTDTFDRDFALSMVSSEQDALQEIEEAIDRIFK 212 Query: 109 EDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAEIR 145 +G CE G +I RL A P + + E Sbjct: 213 GTYGICEMTGKQIREERLMAVPFTRYSMKTQEQIEKN 249 >UniRef50_Q2SLB9 DnaK suppressor protein n=7 Tax=Gammaproteobacteria RepID=Q2SLB9_HAHCH Length = 141 Score = 97.8 bits (242), Expect = 9e-20, Method: Composition-based stats. Identities = 48/127 (37%), Positives = 70/127 (55%), Gaps = 1/127 (0%) Query: 25 EKPGEEYMNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAANFPDPVDRAAQEEEFSL 84 P +YM+ QLA F+ L A D + + +F D DRA++EE+ ++ Sbjct: 16 AAPESDYMSAEQLAFFKDRLMALHESTCDRIQEARDQITGPM-DFSDENDRASREEQSAI 74 Query: 85 ELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAEI 144 LR DRE+KL+ KI+++LK++ +GYC G IGI RL ARPTA+ C + K L EI Sbjct: 75 ALRIVDREQKLLPKIQQSLKRIRLGTYGYCLESGEPIGIPRLLARPTAEYCAEVKALKEI 134 Query: 145 REKQMAG 151 +E Sbjct: 135 KEHHYKS 141 >UniRef50_B4U7Z4 Transcriptional regulator, TraR/DksA family n=3 Tax=Aquificaceae RepID=B4U7Z4_HYDS0 Length = 118 Score = 97.8 bits (242), Expect = 1e-19, Method: Composition-based stats. Identities = 44/115 (38%), Positives = 65/115 (56%) Query: 32 MNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAANFPDPVDRAAQEEEFSLELRNRDR 91 + E QL + +L +N + + +++ + ++D + D +DR E L R DR Sbjct: 2 LTEEQLNELKNMLIEQKNMIIERLEKQIDDVEDVTFSGGDELDRGGLEGSRLLRYRTTDR 61 Query: 92 ERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAEIRE 146 E KL+KKIE TL ++E+ +GYCE CG EI RL+ARP +CI CK L E E Sbjct: 62 ETKLLKKIEYTLARIENGTYGYCEVCGAEIPYERLKARPVTSMCIRCKELEEENE 116 >UniRef50_Q2GI38 DnaK suppressor protein n=9 Tax=Anaplasmataceae RepID=Q2GI38_EHRCR Length = 152 Score = 97.4 bits (241), Expect = 1e-19, Method: Composition-based stats. Identities = 42/124 (33%), Positives = 63/124 (50%), Gaps = 1/124 (0%) Query: 24 QEKPGEEYMNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAANFPDPVDRAAQEEEFS 83 +++ YMN QL +FR+ L WR L+ E + T + D D A +E Sbjct: 12 EDEDDSNYMNHKQLEYFRQKLIKWREVLQKESEELATELLRP-QADADLTDMATKEHNIV 70 Query: 84 LELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAE 143 L L R R LI +I K +++++D +GYCE G +IGI RLEA P I+ + E Sbjct: 71 LILNTRKRNEALIIEINKAIQRIDDGLYGYCEETGEKIGIARLEANPITLYSIEEQERRE 130 Query: 144 IREK 147 ++K Sbjct: 131 KQQK 134 >UniRef50_O66611 Uncharacterized protein aq_250 n=3 Tax=Aquificaceae RepID=Y250_AQUAE Length = 145 Score = 97.4 bits (241), Expect = 1e-19, Method: Composition-based stats. Identities = 28/117 (23%), Positives = 47/117 (40%), Gaps = 3/117 (2%) Query: 32 MNEAQLAHFRRILEAWRNQLRDEV---DRTVTHMQDEAANFPDPVDRAAQEEEFSLELRN 88 MN+ L ++ L + ++ + + T + +E+ D D L Sbjct: 1 MNKELLEKCKQKLLEEKAKILERYLEKEETQQRLGEESKEPRDWEDIGQMTYTEELLDNL 60 Query: 89 RDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAEIR 145 + E +++I+ L+K+E +G CE CG EI RL A P C C E Sbjct: 61 SNVEIATLREIDYALEKIEKGTYGICERCGEEIPEPRLCAIPWTRYCAKCAEEVERE 117 >UniRef50_B1J6V4 Transcriptional regulator, TraR/DksA family n=4 Tax=Pseudomonas RepID=B1J6V4_PSEPW Length = 143 Score = 97.4 bits (241), Expect = 1e-19, Method: Composition-based stats. Identities = 46/122 (37%), Positives = 70/122 (57%), Gaps = 1/122 (0%) Query: 27 PGEEYMNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAANFPDPVDRAAQEEEFSLEL 86 P E YM+ AQ A FR +L + R +L+D + M+ DP D EE+ +L Sbjct: 19 PDETYMDAAQQAFFRALLLSQRKELQDRISGEFEAMRQF-EPSSDPSDLGTVEEQRQWQL 77 Query: 87 RNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAEIRE 146 R +RE+KL+ KI++ L+++ ++G+C+ G IG+RRL RPTA L I+ K E RE Sbjct: 78 RLLEREKKLLDKIDEALERLSRGEYGWCKETGEPIGLRRLLLRPTATLSIEAKERQERRE 137 Query: 147 KQ 148 + Sbjct: 138 RH 139 >UniRef50_A0LTP3 Transcriptional regulators, TraR/DksA family n=7 Tax=Actinomycetales RepID=A0LTP3_ACIC1 Length = 527 Score = 97.0 bits (240), Expect = 1e-19, Method: Composition-based stats. Identities = 35/123 (28%), Positives = 54/123 (43%), Gaps = 5/123 (4%) Query: 28 GEEYMNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAANFPDPVDRA-----AQEEEF 82 E A+L R LEA +LR E++ + + + + D + E Sbjct: 405 DEYTWTAAELDEIRAQLEAEIVRLRREIEVAESGLAERMRDGGDGAGDDQADAGTKTFER 464 Query: 83 SLELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLA 142 E+ + R L+ + E L ++ D +G CE+CG I RL+A P A LC+ CK Sbjct: 465 EHEMSLANNARDLLVQTEHALARIADGTYGRCENCGNPINKLRLQANPRATLCVSCKQRE 524 Query: 143 EIR 145 E R Sbjct: 525 ERR 527 >UniRef50_B1H0G2 Putative dnaK suppressor n=1 Tax=uncultured Termite group 1 bacterium phylotype Rs-D17 RepID=B1H0G2_UNCTG Length = 119 Score = 97.0 bits (240), Expect = 1e-19, Method: Composition-based stats. Identities = 29/113 (25%), Positives = 53/113 (46%), Gaps = 1/113 (0%) Query: 32 MNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEA-ANFPDPVDRAAQEEEFSLELRNRD 90 MN+ LA ++IL + +++ + + D++ + D +D A+Q E + Sbjct: 1 MNKKDLASLKKILIQKKMDFLNKMSKAQRGIYDDSNTSVGDEIDTASQNSEKEMYFELVA 60 Query: 91 RERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAE 143 ++ + I L K+E +G CE C I + RL+ P A CI C+ +E Sbjct: 61 SDKMTLDAINDALVKIEKNAYGKCEGCSNNILLERLKVIPWAKYCIQCQEESE 113 >UniRef50_D1CBT8 Transcriptional regulator, TraR/DksA family n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=D1CBT8_THET1 Length = 126 Score = 97.0 bits (240), Expect = 2e-19, Method: Composition-based stats. Identities = 29/126 (23%), Positives = 55/126 (43%), Gaps = 8/126 (6%) Query: 30 EYMNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQ--------DEAANFPDPVDRAAQEEE 81 + + Q++ R+ LE R +L E+ + ++++ D E Sbjct: 1 MAIRDQQISELRKRLEDERARLVSELRDLQSDASQWGESVRDEDSSYGNHMADEGTDTFE 60 Query: 82 FSLELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTL 141 E+ + R ++ +IE LK++++ +G C CG EI I RL ARP A C+ + Sbjct: 61 QEKEIALQRNLRSVLNEIEAALKRMDEGTYGICIDCGQEIPIERLMARPYAVRCVADQEK 120 Query: 142 AEIREK 147 + + Sbjct: 121 YDRVHR 126 >UniRef50_Q894D3 DnaK suppressor protein n=1 Tax=Clostridium tetani RepID=Q894D3_CLOTE Length = 210 Score = 97.0 bits (240), Expect = 2e-19, Method: Composition-based stats. Identities = 30/120 (25%), Positives = 57/120 (47%), Gaps = 9/120 (7%) Query: 32 MNEAQLAHFRRILEAWRNQLRDEVD---------RTVTHMQDEAANFPDPVDRAAQEEEF 82 M++ +L HF+ L + ++ + +D Q+ ++ P D A++ + Sbjct: 1 MDKERLQHFKNRLLKEKREVMETIDLMKKADTINSNEEFSQELSSYDNHPSDTASELFDK 60 Query: 83 SLELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLA 142 L + E ++ KIE +L+ +E +G C++CG I RLE P A+ CI+C+ Sbjct: 61 ERGLAFKGNEINILNKIESSLESIEKGQYGNCKNCGKRINEDRLEFIPYAENCIECQKEL 120 >UniRef50_D1C5L2 Transcriptional regulator, TraR/DksA family n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C5L2_SPHTD Length = 132 Score = 96.6 bits (239), Expect = 2e-19, Method: Composition-based stats. Identities = 31/119 (26%), Positives = 48/119 (40%), Gaps = 2/119 (1%) Query: 29 EEYMNEAQ--LAHFRRILEAWRNQLRDEVDRTVTHMQDEAANFPDPVDRAAQEEEFSLEL 86 E M A+ L R L R ++ + + DE D A+ E + Sbjct: 11 REVMTTARGRLMRLREDLLRHRAEVEESLAAMTVSQGDEGTIATHIADAASDLLEAQTTV 70 Query: 87 RNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAEIR 145 R + +++ L ++E +G C CG I RL+A PTA C+ C+T E R Sbjct: 71 GALARIDAELAEVDAALDRLERGTYGVCIDCGEMIDPARLKALPTATRCLRCQTHFEYR 129 >UniRef50_Q1JWV8 Transcriptional regulators, TraR/DksA family n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JWV8_DESAC Length = 139 Score = 96.6 bits (239), Expect = 2e-19, Method: Composition-based stats. Identities = 42/131 (32%), Positives = 69/131 (52%) Query: 20 VEPYQEKPGEEYMNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAANFPDPVDRAAQE 79 V Y E YMN+ QL +F L+ WR QL+ E M++E + V+++ E Sbjct: 5 VGSYHPHEEEPYMNQRQLDYFESQLKQWRTQLQQEAHDATREMREENVRAAELVEQSLSE 64 Query: 80 EEFSLELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCK 139 + + L + DR+ +L+ +I L ++++ +GYC G EIG+RRL A P A L ++ + Sbjct: 65 YQRRMTLISHDRKSRLLAQINAALLRIKEGSYGYCVETGEEIGLRRLLAYPAAFLLVEVQ 124 Query: 140 TLAEIREKQMA 150 E R + A Sbjct: 125 EAREHRSRSFA 135 >UniRef50_A8GD52 Transcriptional regulator, TraR/DksA family n=9 Tax=Gammaproteobacteria RepID=A8GD52_SERP5 Length = 141 Score = 96.6 bits (239), Expect = 2e-19, Method: Composition-based stats. Identities = 46/137 (33%), Positives = 74/137 (54%), Gaps = 1/137 (0%) Query: 12 LSILAIAGVEPYQEKPGEEYMNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAANFPD 71 ++++ + + P +YMN AQ A FR+ L+ + +L ++ + D D Sbjct: 1 MNVVTLLNQQQLLAMPESDYMNPAQRAFFRQRLQDEQQKLLQHIEALKRDI-DGGEVSGD 59 Query: 72 PVDRAAQEEEFSLELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPT 131 D+AA+EE+ L R DRE +L+ KI L ++ + ++GYC G IG+ RL RPT Sbjct: 60 EADKAAREEDLRLLFRQLDRESRLLPKISAALTRLHNGEYGYCRESGEPIGLARLLLRPT 119 Query: 132 ADLCIDCKTLAEIREKQ 148 A+L I+ KT E+RE Sbjct: 120 AELSIEAKTAQEMREPH 136 >UniRef50_P42408 Uncharacterized protein yteA n=2 Tax=Bacillus subtilis group RepID=YTEA_BACSU Length = 239 Score = 96.6 bits (239), Expect = 2e-19, Method: Composition-based stats. Identities = 30/113 (26%), Positives = 49/113 (43%), Gaps = 10/113 (8%) Query: 32 MNEAQLAHFRRILEAWRNQLRDEVDRTV----------THMQDEAANFPDPVDRAAQEEE 81 + + QL H + LE + + + + +A P D+A + E Sbjct: 2 LTKEQLQHLKNELEQTKKDILNRFKDNDHFQLNSAFPYDSWGELSAYDNHPGDQATELYE 61 Query: 82 FSLELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADL 134 ++ ER+ ++ IE +LK +E+ +G CE G EI RLEA PTA Sbjct: 62 REKDIALDLHEREHLRDIEHSLKAIENGTYGICEVSGKEIPFERLEALPTATT 114 >UniRef50_D1C120 Transcriptional regulator, TraR/DksA family n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C120_SPHTD Length = 130 Score = 96.6 bits (239), Expect = 2e-19, Method: Composition-based stats. Identities = 34/125 (27%), Positives = 51/125 (40%), Gaps = 8/125 (6%) Query: 30 EYMNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAAN--------FPDPVDRAAQEEE 81 M + QL R L+ + E+ ++ A D+A E Sbjct: 1 MVMTDEQLEAIRARLQQALAETTAEISEIDEQVRSFGAGEQDASYGVDNHIGDQADVVYE 60 Query: 82 FSLELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTL 141 L RDR IE+ + K++ ++GYCE+C I RLEA P A CIDC+ Sbjct: 61 QERLLSVRDRLADRKVLIERAITKMDQGEYGYCENCKRPIPPDRLEALPFARYCIDCQAD 120 Query: 142 AEIRE 146 + R+ Sbjct: 121 MDRRQ 125 >UniRef50_D0LZD2 Transcriptional regulator, TraR/DksA family n=3 Tax=Myxococcales RepID=D0LZD2_HALO1 Length = 124 Score = 96.2 bits (238), Expect = 2e-19, Method: Composition-based stats. Identities = 42/122 (34%), Positives = 64/122 (52%), Gaps = 1/122 (0%) Query: 30 EYMNEAQLAHFRRILEAWRNQLRDEVDRTVTH-MQDEAANFPDPVDRAAQEEEFSLELRN 88 + ++ + FR +LE R + + +RT+ M + + D +D A+ E S E R Sbjct: 3 KPLSAKDIEKFRDLLENKRRLVLERANRTLHEDMTLDPDDLADEMDLASSESYQSFEFRL 62 Query: 89 RDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAEIREKQ 148 R RE+ L+ K++ L+K+ + FG CE C IG +RLEARP LCI CK E E+ Sbjct: 63 RGREKSLLNKLDLALRKLGEGTFGICEVCEEPIGKKRLEARPETTLCIQCKEAQERDERV 122 Query: 149 MA 150 Sbjct: 123 FG 124 >UniRef50_A1SL71 Zinc finger, DksA/TraR C4-type n=4 Tax=Actinomycetales RepID=A1SL71_NOCSJ Length = 283 Score = 96.2 bits (238), Expect = 2e-19, Method: Composition-based stats. Identities = 38/132 (28%), Positives = 54/132 (40%), Gaps = 5/132 (3%) Query: 19 GVEPYQEKPGEEYMNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAANFPD-----PV 73 K GE +A+L L R + ++ + + D Sbjct: 152 SPSALVVKEGEAAWTKAELKEVLDELHEQREHSQRIIEAQEAELDGLMRDSGDGAGQDQA 211 Query: 74 DRAAQEEEFSLELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTAD 133 D A E EL + ER + +IE+ L +++D +G CESCG IG RL A P A Sbjct: 212 DLGATSFERDHELTVLNSERDKLAQIERALARIDDGTYGVCESCGNPIGKMRLMAFPRAT 271 Query: 134 LCIDCKTLAEIR 145 LC+ CK E R Sbjct: 272 LCMTCKQREERR 283 >UniRef50_Q253H0 DnaK suppressor n=16 Tax=Chlamydiales RepID=Q253H0_CHLFF Length = 124 Score = 96.2 bits (238), Expect = 3e-19, Method: Composition-based stats. Identities = 24/118 (20%), Positives = 58/118 (49%), Gaps = 3/118 (2%) Query: 30 EYMNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQ---DEAANFPDPVDRAAQEEEFSLEL 86 ++E ++A+F+ L +++L ++ ++ + D+ + ++ L Sbjct: 1 MPLSEEEIANFKHRLLEMKHKLSHTLEGNAQEVKKPNEATGYSQHQADQGTDTFDRTISL 60 Query: 87 RNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAEI 144 +E +L+++I + L+K+E+ +G C+ G EI + RL A P A + + ++ E Sbjct: 61 EVTTKEYELLRQINRALEKIEESSYGICDVSGEEIPLARLMAIPYATMTVKAQSQFEK 118 >UniRef50_C9R7U4 Transcriptional regulator, TraR/DksA family n=1 Tax=Ammonifex degensii KC4 RepID=C9R7U4_AMMDK Length = 176 Score = 95.9 bits (237), Expect = 3e-19, Method: Composition-based stats. Identities = 29/100 (29%), Positives = 47/100 (47%) Query: 47 WRNQLRDEVDRTVTHMQDEAANFPDPVDRAAQEEEFSLELRNRDRERKLIKKIEKTLKKV 106 + R+E + + + P D ++ E + +L R+ ++ IE L+++ Sbjct: 1 MEERTRNERLPLREAIGELSLADNHPADVGSELFERAKDLALREDALLKLQVIEDALRRL 60 Query: 107 EDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAEIRE 146 E+ +GYCESCG I RLEA P LC CK E + Sbjct: 61 EEGTYGYCESCGAPIPRERLEAVPYTTLCHACKERQEAKG 100 >UniRef50_Q2B4E3 Putative uncharacterized protein n=4 Tax=Bacillus RepID=Q2B4E3_9BACI Length = 252 Score = 95.9 bits (237), Expect = 3e-19, Method: Composition-based stats. Identities = 24/117 (20%), Positives = 50/117 (42%), Gaps = 10/117 (8%) Query: 33 NEAQLAHFRRILEAWRNQLRDEV----------DRTVTHMQDEAANFPDPVDRAAQEEEF 82 + Q+ + +LE + + +++ + + + + P D + E Sbjct: 3 TKDQINDLKSMLEEDKKTIEEQLDSDTNSRFDNESARDTVGELSMYDNHPGDAGTELFER 62 Query: 83 SLELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCK 139 + + + + + K+ K L+ +ED +G C CG ++ RLEA PTA C+D Sbjct: 63 EKDQAIEEHQNEELDKVNKALQAIEDGTYGKCRECGKDLPFERLEAVPTALYCVDHA 119 >UniRef50_C8X580 Transcriptional regulator, TraR/DksA family n=1 Tax=Desulfohalobium retbaense DSM 5692 RepID=C8X580_DESRD Length = 115 Score = 95.5 bits (236), Expect = 4e-19, Method: Composition-based stats. Identities = 34/113 (30%), Positives = 58/113 (51%) Query: 32 MNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAANFPDPVDRAAQEEEFSLELRNRDR 91 M+ QL H +L + +L + + + + N DP D+A + L L + R Sbjct: 1 MDREQLHHMNTVLSQKKQELEEAIGQMQNDLATMPHNLADPADQATLSTDRQLALLRQQR 60 Query: 92 ERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAEI 144 + ++E+ L ++ + ++G CE CG EIG+ RL A P+A LCI+C+ E Sbjct: 61 LLHQLHEVEQALHQLANGEYGLCEECGEEIGVPRLVACPSARLCIECQEQLER 113 >UniRef50_A4SHJ5 DnaK suppressor protein n=3 Tax=Gammaproteobacteria RepID=A4SHJ5_AERS4 Length = 128 Score = 95.1 bits (235), Expect = 6e-19, Method: Composition-based stats. Identities = 37/122 (30%), Positives = 72/122 (59%), Gaps = 1/122 (0%) Query: 30 EYMNEAQLAHFRRILEAWRNQLRDEVD-RTVTHMQDEAANFPDPVDRAAQEEEFSLELRN 88 ++M + QLA ++ +E +L D ++ + + + D +DRA+ EE LEL Sbjct: 3 DFMTKDQLAFYKGQIERQILELEDRLNSQASQAIATDTNEMADEIDRASIEEARRLELNR 62 Query: 89 RDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAEIREKQ 148 + ++ ++K++ L+++ + DFGYCESCG EI ++RL+ARP + C++C++ E + Sbjct: 63 IEHDKLHLRKLQGALRRINEGDFGYCESCGDEISLKRLQARPESRFCVECQSTKEFNDTH 122 Query: 149 MA 150 + Sbjct: 123 VY 124 >UniRef50_A4V7S0 Putative transcriptional regulator DnaK suppressor protein homolog n=1 Tax=Pseudomonas fluorescens SBW25 RepID=A4V7S0_PSEFS Length = 138 Score = 94.7 bits (234), Expect = 7e-19, Method: Composition-based stats. Identities = 32/132 (24%), Positives = 58/132 (43%), Gaps = 1/132 (0%) Query: 17 IAGVEPYQEKPGEEYMNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAANFPDPVDRA 76 + +P + YM+ QL F+++L + +++L + + D D Sbjct: 2 VIDAAALLAQPTDNYMDSVQLQFFKQLLLSKQSELTARIVGHEEAVS-VTEKVADSSDAG 60 Query: 77 AQEEEFSLELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCI 136 EE L +R ER I+ L ++E++ +G+C+ G IG++RL PTA Sbjct: 61 TIEENRGLLMRILKGERAEAMAIKAALVRIEEDAYGWCDDSGEPIGLKRLLNNPTASRTT 120 Query: 137 DCKTLAEIREKQ 148 + +T E K Sbjct: 121 EAQTRFERLGKH 132 >UniRef50_B2ULP7 Transcriptional regulator, TraR/DksA family n=1 Tax=Akkermansia muciniphila ATCC BAA-835 RepID=B2ULP7_AKKM8 Length = 207 Score = 94.7 bits (234), Expect = 8e-19, Method: Composition-based stats. Identities = 27/118 (22%), Positives = 50/118 (42%), Gaps = 7/118 (5%) Query: 40 FRRILEAWRNQLRDEVD-------RTVTHMQDEAANFPDPVDRAAQEEEFSLELRNRDRE 92 R+ L R++ D + R + + + D + + L +E Sbjct: 62 QRQHLLDLRDRALDNMSGVARDTLRNHPEGSEASGSGEHQADAGSDAYDRDFALSLLSKE 121 Query: 93 RKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAEIREKQMA 150 + + +IE+ L ++++ +G CE I I RLEA P A L ++C+ E + Q A Sbjct: 122 QDGLYEIEQALARIDNGTYGICEMSYKVIPILRLEAIPFARLTVECQAQWEKEKGQNA 179 >UniRef50_Q73KX9 C4 zinc finger domain protein, DksA/TraR family n=1 Tax=Treponema denticola RepID=Q73KX9_TREDE Length = 119 Score = 94.7 bits (234), Expect = 8e-19, Method: Composition-based stats. Identities = 25/116 (21%), Positives = 51/116 (43%), Gaps = 2/116 (1%) Query: 32 MNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAANF--PDPVDRAAQEEEFSLELRNR 89 M + + + L R ++ + + + AN D D A+ + + Sbjct: 1 MKKKFIEEMKEYLLKEREEILASLQKNDEEYAETLANSIPKDFADLASYSTDRDMLEFIG 60 Query: 90 DRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAEIR 145 + K ++KI+ L+++ + +G C +C +I RL+A P A CI C+ +E + Sbjct: 61 ENNVKKLQKIDSALERIREGKYGKCITCKEQIPEDRLKALPYALKCIHCQAKSEKK 116 >UniRef50_C5RLG0 Transcriptional regulator, TraR/DksA family n=1 Tax=Clostridium cellulovorans 743B RepID=C5RLG0_CLOCL Length = 199 Score = 94.7 bits (234), Expect = 8e-19, Method: Composition-based stats. Identities = 27/117 (23%), Positives = 49/117 (41%), Gaps = 9/117 (7%) Query: 32 MNEAQLAHFRRILEAWRNQLR---------DEVDRTVTHMQDEAANFPDPVDRAAQEEEF 82 +NE + +F+ L R ++ + +D + + + P D A + E Sbjct: 2 LNEDEKKYFKNKLLTERERINKLLMEMKDNETIDSNLNATAELSFYDNHPSDSATELSEI 61 Query: 83 SLELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCK 139 + E ++ KI + L +E+ D+G C +C EI RL+ P A C C+ Sbjct: 62 EKGKALKANETNMLGKINEALDALENGDYGLCGNCQKEITKERLDFLPYAKYCAKCQ 118 >UniRef50_A0Q071 General stress protein, DnaK suppressor DskA n=3 Tax=Clostridium RepID=A0Q071_CLONN Length = 206 Score = 94.7 bits (234), Expect = 9e-19, Method: Composition-based stats. Identities = 26/122 (21%), Positives = 49/122 (40%), Gaps = 9/122 (7%) Query: 32 MNEAQLAHFRRILEAWRNQLRDEVDRTVT---------HMQDEAANFPDPVDRAAQEEEF 82 M E + HFR L + Q+ + +++ + + P D + + Sbjct: 1 MKEKRKQHFRDKLYKEKKQVEELINKIKEFEPVKFSSEANSELSIYSNHPADIGQEFLDK 60 Query: 83 SLELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLA 142 + + E + + +I ++L +E +G C C +I RLEA P A C+ CK Sbjct: 61 AKGIALEKAELEKLHEISESLYDMEHGTYGICRICKNQIPDDRLEAVPYAKYCVHCKNNQ 120 Query: 143 EI 144 + Sbjct: 121 DK 122 >UniRef50_Q30RD2 Transcriptional regulators, TraR/DksA family n=3 Tax=Epsilonproteobacteria RepID=Q30RD2_SULDN Length = 116 Score = 94.3 bits (233), Expect = 9e-19, Method: Composition-based stats. Identities = 32/116 (27%), Positives = 59/116 (50%), Gaps = 1/116 (0%) Query: 32 MNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAA-NFPDPVDRAAQEEEFSLELRNRD 90 M E++L +F+ ILE+ + Q+ + + ++ D D A+ + +E Sbjct: 1 MQESELKYFKEILESRKEQIIKNIRGVNEELSQLSSLELKDEGDHASVDNSSMIESAIVH 60 Query: 91 RERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAEIRE 146 ++ + +++I TL K+ D+G CE C IG +RL+ +P A CIDC+ + E Sbjct: 61 QQEQELREINVTLGKIATGDYGICEMCEDPIGFQRLKVKPHAIYCIDCREIVEKSR 116 >UniRef50_B0VG86 Putative uncharacterized protein n=1 Tax=Candidatus Cloacamonas acidaminovorans RepID=B0VG86_9BACT Length = 148 Score = 94.3 bits (233), Expect = 1e-18, Method: Composition-based stats. Identities = 31/149 (20%), Positives = 58/149 (38%), Gaps = 12/149 (8%) Query: 6 NRKTSSLSILAIAGVEPYQEKPGEEYMNEAQLAHFRRILEAWRNQLR----DEVDRTVTH 61 R + +A + P + K EE R LE + ++ Sbjct: 7 KRAKPKENKMATKKLPPEKLKHYEEV--------IRAELEESIAYIESINKEQSLGARES 58 Query: 62 MQDEAANFPDPVDRAAQEEEFSLELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEI 121 D ++ D+ + + + ER+ I+++ + L+++ D +G CE CG I Sbjct: 59 SGDLSSYAFHQADQGSDTNLMEQSVMMLESEREKIRQLNEALQRISDGTYGICEFCGEFI 118 Query: 122 GIRRLEARPTADLCIDCKTLAEIREKQMA 150 RLE P A C+ CK E ++++ Sbjct: 119 QENRLEIIPYATCCVACKEKNEDKKRRQK 147 >UniRef50_C1DXT7 Transcriptional regulator, TraR/DksA family n=5 Tax=Aquificales RepID=C1DXT7_SULAA Length = 144 Score = 93.9 bits (232), Expect = 1e-18, Method: Composition-based stats. Identities = 33/108 (30%), Positives = 47/108 (43%) Query: 36 QLAHFRRILEAWRNQLRDEVDRTVTHMQDEAANFPDPVDRAAQEEEFSLELRNRDRERKL 95 L R L RNQ+ ++ + +E D D E R +R+ Sbjct: 2 DLETIREKLLEKRNQILKSLEESAKSDINEKTGVGDDADTVTDELSRETHYRLTQADRET 61 Query: 96 IKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAE 143 + I+ L+K++ +G CE CG IG +RLEA P LCIDC E Sbjct: 62 LYLIDLALRKIDSGIYGICEECGAVIGEKRLEAIPWVRLCIDCSQNEE 109 >UniRef50_C8WW56 Transcriptional regulator, TraR/DksA family n=2 Tax=Alicyclobacillus acidocaldarius RepID=C8WW56_ALIAD Length = 213 Score = 93.5 bits (231), Expect = 2e-18, Method: Composition-based stats. Identities = 33/121 (27%), Positives = 51/121 (42%), Gaps = 10/121 (8%) Query: 36 QLAHFRRILEAWRNQLRDEVDRTV----------THMQDEAANFPDPVDRAAQEEEFSLE 85 R LEA R +L D ++ + A P D A++ + Sbjct: 2 DTDSIRSRLEAARERLIDRLNGAETSADIRSAMPDEFSELAMYDNHPADVASELALRNQA 61 Query: 86 LRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAEIR 145 + R R+ + + +E L ++ +G CESCG I RLEA PT C+DC+ E R Sbjct: 62 VGERLRDERALADVEDALSRIRQGTYGQCESCGRPIPPDRLEAIPTTRRCVDCEREVEAR 121 Query: 146 E 146 + Sbjct: 122 Q 122 >UniRef50_A3ZQT2 Probable DnaK suppressor protein n=1 Tax=Blastopirellula marina DSM 3645 RepID=A3ZQT2_9PLAN Length = 134 Score = 93.5 bits (231), Expect = 2e-18, Method: Composition-based stats. Identities = 30/111 (27%), Positives = 52/111 (46%) Query: 33 NEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAANFPDPVDRAAQEEEFSLELRNRDRE 92 + + IL R+ LR + ++ +++ D VD A + L + + E Sbjct: 5 RTDFIDKTKEILLKRRDALRKALAGDLSMLKELEQTAGDVVDFALDSAQDELSSQLAEVE 64 Query: 93 RKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAE 143 + + +I+K L+++ FG CE C +I RL+A P A LCI C+ E Sbjct: 65 SRELAQIDKALERIRGGSFGECEGCTCKIPTARLQALPYATLCIKCQRELE 115 >UniRef50_A1QYW3 DnaK suppressor protein n=21 Tax=Borrelia RepID=A1QYW3_BORT9 Length = 127 Score = 93.5 bits (231), Expect = 2e-18, Method: Composition-based stats. Identities = 26/117 (22%), Positives = 47/117 (40%), Gaps = 3/117 (2%) Query: 35 AQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAANF---PDPVDRAAQEEEFSLELRNRDR 91 + R L + ++ + + ++ N D +D A + + Sbjct: 9 EFVEKMRNFLLESKKEILNSIRSVEDSKREIINNDMHLKDIIDIAFDNMDGNNLEALSSV 68 Query: 92 ERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAEIREKQ 148 E+K + I + L ++ +G C +C I RL A P A LCI C+T E + K+ Sbjct: 69 EKKKLHLINQALYRISQNTYGNCLACDKSITRERLVAIPYAFLCISCQTKKEKKGKR 125 >UniRef50_B2S244 Possible dnaK suppressor n=3 Tax=Treponema RepID=B2S244_TREPS Length = 120 Score = 93.5 bits (231), Expect = 2e-18, Method: Composition-based stats. Identities = 25/120 (20%), Positives = 52/120 (43%), Gaps = 2/120 (1%) Query: 32 MNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAANFP--DPVDRAAQEEEFSLELRNR 89 M+++ + + L + L + Q A D D A+ + + + Sbjct: 1 MDQSFVEEMKVSLVERKRSLARSLTTNNEDFQAIVAGVDPKDSADIASDDMDRKMLESLS 60 Query: 90 DRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAEIREKQM 149 ++ + +++IE L ++E +G C CG I RL A P + +CI+C++ E + + Sbjct: 61 AKDLRCLQQIESALLRIEQGRYGKCADCGESIPEDRLRAIPYSLMCIECQSARESKRRAF 120 >UniRef50_A6DCX4 Transcriptional regulator, TraR/DksA family protein n=1 Tax=Caminibacter mediatlanticus TB-2 RepID=A6DCX4_9PROT Length = 116 Score = 93.2 bits (230), Expect = 2e-18, Method: Composition-based stats. Identities = 30/112 (26%), Positives = 57/112 (50%), Gaps = 1/112 (0%) Query: 37 LAHFRRILEAWRNQLRDEVDRTVTHMQDEAA-NFPDPVDRAAQEEEFSLELRNRDRERKL 95 + HF+ IL + +L + + + + + D D AA + + + ++++ Sbjct: 5 IEHFKEILLMRKAELEKILFNISNEIDEISRCDIKDDGDFAAASMDSGRDYQIYLKQKQE 64 Query: 96 IKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAEIREK 147 +K+IE+ LK++E+ +G CE C I RL+ +P A CI C+ + E EK Sbjct: 65 LKEIEEALKRIEEGSYGICEMCDEPIQEERLKIKPYAKYCIICREIIEKEEK 116 >UniRef50_A6TRY0 Transcriptional regulator, TraR/DksA family n=1 Tax=Alkaliphilus metalliredigens QYMF RepID=A6TRY0_ALKMQ Length = 224 Score = 93.2 bits (230), Expect = 2e-18, Method: Composition-based stats. Identities = 26/118 (22%), Positives = 55/118 (46%), Gaps = 10/118 (8%) Query: 32 MNEAQLAHFRRILEAWRNQLRDEV----------DRTVTHMQDEAANFPDPVDRAAQEEE 81 M+ + +F+R L +N + + + + + +A P D ++ Sbjct: 1 MDPKKQGYFKRRLHEEKNNALETLTRMEANQGDDESMRENTGELSAYDNHPADLGSEMFM 60 Query: 82 FSLELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCK 139 S++ + ER + +I++ L+K+++ +G C+ CG I RLE P A++C+ C Sbjct: 61 MSMQANLENHERYRVTEIDRALEKIQEGTYGECQLCGQGIPDERLEVMPEANICMVCA 118 >UniRef50_C5EYJ0 DnaK suppressor protein n=4 Tax=Helicobacter RepID=C5EYJ0_9HELI Length = 119 Score = 93.2 bits (230), Expect = 2e-18, Method: Composition-based stats. Identities = 32/113 (28%), Positives = 58/113 (51%) Query: 32 MNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAANFPDPVDRAAQEEEFSLELRNRDR 91 M + ++ ++ILE + + D M++ D D AA + +L+ + Sbjct: 1 MQQTEIEALKKILETKKKAILDNNFDHQKSMENLRGISLDEADEAAMSMKNTLDGLIFEH 60 Query: 92 ERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAEI 144 K ++ IE+ L+K+E+ ++G CE C I I+RL+A+P A CI C+ + E Sbjct: 61 HHKELEYIERALEKIENGEYGICEMCDEPISIQRLKAKPHARFCIICREIVEK 113 >UniRef50_Q0VNX0 DnaK suppressor protein homolog, DksA/TraR family n=2 Tax=Alcanivorax RepID=Q0VNX0_ALCBS Length = 140 Score = 92.8 bits (229), Expect = 3e-18, Method: Composition-based stats. Identities = 41/121 (33%), Positives = 65/121 (53%), Gaps = 2/121 (1%) Query: 30 EYMNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAANFPDPVDRAAQEEEFSLELRNR 89 +YMN +Q FR+ L A + + ++Q A DP+D A +EE +LR Sbjct: 17 QYMNASQREFFRKRLLALALECEQHLGNARNNLQTPAQ--ADPLDAAVEEETCRHQLRFM 74 Query: 90 DRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAEIREKQM 149 R++ L+ KI L+++++ D+GYC+ G IG+ RL ARPT + C + K E E+ Sbjct: 75 ARQQALLGKIRGALRRLQNGDYGYCKISGDPIGLPRLLARPTTEYCAEVKARLEQNERHY 134 Query: 150 A 150 A Sbjct: 135 A 135 >UniRef50_D1YA14 C4-type zinc finger protein, DksA/TraR family n=3 Tax=Propionibacterium acnes RepID=D1YA14_PROAC Length = 159 Score = 92.8 bits (229), Expect = 3e-18, Method: Composition-based stats. Identities = 32/143 (22%), Positives = 59/143 (41%), Gaps = 6/143 (4%) Query: 9 TSSLSILAIAGVEPYQE-KPGEEYMNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAA 67 SS+S + + + G+E +++ LE+ ++ + + + D Sbjct: 17 ESSMSDHDVEAIAASLPVRDGDEPWTADEISEIVGTLESDVQRMGTALTKAENDLADLMK 76 Query: 68 NFPDPV-----DRAAQEEEFSLELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIG 122 D D + + E E+ R + + + L+ ++ +G CESCG IG Sbjct: 77 QGNDGAGMDTIDVGSSQFERDQEISVTRNARAVYDQSKLALQLLDRGTWGTCESCGEPIG 136 Query: 123 IRRLEARPTADLCIDCKTLAEIR 145 RL+A P A +C+ CK E R Sbjct: 137 KARLQAFPRATMCVKCKQRQERR 159 >UniRef50_A4XKS6 Transcriptional regulator, TraR/DksA family n=2 Tax=Clostridia RepID=A4XKS6_CALS8 Length = 209 Score = 92.4 bits (228), Expect = 4e-18, Method: Composition-based stats. Identities = 28/83 (33%), Positives = 42/83 (50%) Query: 64 DEAANFPDPVDRAAQEEEFSLELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGI 123 + + P D A+ E + + ++ ++ IEK L K+E +FGYC SC EI Sbjct: 42 EVSNYDNHPADIASDLFEVEKNMGLKADMKRKLELIEKALSKIEKGNFGYCISCKKEIPF 101 Query: 124 RRLEARPTADLCIDCKTLAEIRE 146 RL A P + CI+C+ E RE Sbjct: 102 DRLLAIPYTEFCIECQKDMEKRE 124 >UniRef50_Q5WFI4 Putative uncharacterized protein n=1 Tax=Bacillus clausii KSM-K16 RepID=Q5WFI4_BACSK Length = 207 Score = 92.4 bits (228), Expect = 4e-18, Method: Composition-based stats. Identities = 24/114 (21%), Positives = 46/114 (40%), Gaps = 3/114 (2%) Query: 32 MNEAQLAHFRRILEAWRNQLRDEVDRTV--THMQDEAANFPDPVDRAAQEEEFSLELRNR 89 M++ L ++ L+ +++L + + + + P D A E + Sbjct: 1 MDQKWL-KLKQALQQQKHELEQTLANQINDHDTGELSQYDNHPADTATDLFEREKDQAVH 59 Query: 90 DRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAE 143 + + + ++E L+K D +G CE G I RLEA P A ++ E Sbjct: 60 NHIKDELHEVEHALEKFNDGSYGICEKTGKAIPYERLEAYPAARTVVEESRPFE 113 >UniRef50_C0GTL3 Transcriptional regulator, TraR/DksA family n=1 Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=C0GTL3_9DELT Length = 243 Score = 92.4 bits (228), Expect = 4e-18, Method: Composition-based stats. Identities = 25/114 (21%), Positives = 46/114 (40%) Query: 32 MNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAANFPDPVDRAAQEEEFSLELRNRDR 91 +++ A L R ++ ++ Q+ + RA + + + Sbjct: 2 LSKHSRAELYNKLFTRRMEILEKSKGLKDQWQEGNYAEKEMASRAQMDNMYRSINALDSQ 61 Query: 92 ERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAEIR 145 R + I+ L ++ ++G C+SCG EI RL+A P A C C AE + Sbjct: 62 ARSELNHIDHALDRMIIGNYGICDSCGQEISEARLQAVPWARYCRVCVNKAEEK 115 >UniRef50_A9B2U1 Transcriptional regulator, TraR/DksA family n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9B2U1_HERA2 Length = 117 Score = 92.0 bits (227), Expect = 5e-18, Method: Composition-based stats. Identities = 29/115 (25%), Positives = 48/115 (41%), Gaps = 5/115 (4%) Query: 30 EYMNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAAN-----FPDPVDRAAQEEEFSL 84 +++AQL +F+ L N L +EV R + D A+ E Sbjct: 1 MTLSKAQLGYFKERLHDMHNHLNEEVQRLEEATNQLNQDAEFGVSNHIADDASDIFEREK 60 Query: 85 ELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCK 139 + ++LI ++E L +++ +G C G +I I RLE P A L I+ Sbjct: 61 NFALIEDRQRLIGEVEAALDRIDHGTYGICLKTGKQIPIERLEVLPYAALSIEAA 115 >UniRef50_Q30V43 Transcriptional regulators, TraR/DksA family n=1 Tax=Desulfovibrio desulfuricans subsp. desulfuricans str. G20 RepID=Q30V43_DESDG Length = 149 Score = 92.0 bits (227), Expect = 5e-18, Method: Composition-based stats. Identities = 36/138 (26%), Positives = 55/138 (39%), Gaps = 1/138 (0%) Query: 11 SLSILAIAGVEPYQEKPGEEYMNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAANFP 70 + I G MN+ QL L L+ + P Sbjct: 3 HAGMRGITLKHRKTATNGVMVMNDQQLGTIADSLRDRVVFLKQQCG-LAPETAAAVIACP 61 Query: 71 DPVDRAAQEEEFSLELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARP 130 D ++A++ E +L++ R R + + +E L ++ FG CE CG EIG RL+A P Sbjct: 62 DENEQASRLAELTLDVALRGRLARQLAAVESALHRIATGGFGRCEECGDEIGEARLKANP 121 Query: 131 TADLCIDCKTLAEIREKQ 148 T LCI C+ E + Sbjct: 122 TTTLCIHCQEDREAEAAR 139 >UniRef50_B4UII3 Transcriptional regulator, TraR/DksA family n=4 Tax=Anaeromyxobacter RepID=B4UII3_ANASK Length = 144 Score = 91.6 bits (226), Expect = 6e-18, Method: Composition-based stats. Identities = 31/134 (23%), Positives = 54/134 (40%), Gaps = 2/134 (1%) Query: 15 LAIAGVEPYQEKPGEEYMNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAANFPDPV- 73 +A G E +++ L R L R L + R + + DP Sbjct: 1 MAGPGALHLSPLRKERNVSDNDLGPLRAQLLRRRGTLLETSRRASAELDALRSADRDPEF 60 Query: 74 -DRAAQEEEFSLELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTA 132 + A E E R + +R+ + +I+ + +++ ++G C C +I RRL A P A Sbjct: 61 EEGAQAEHEQYTLARLGENQRRELVQIDAAIARIDAGEYGICRDCEQDIDPRRLAALPYA 120 Query: 133 DLCIDCKTLAEIRE 146 LC +C E + Sbjct: 121 VLCTECAQRRERAQ 134 >UniRef50_D2R5D7 Transcriptional regulator, TraR/DksA family n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2R5D7_9PLAN Length = 150 Score = 91.6 bits (226), Expect = 7e-18, Method: Composition-based stats. Identities = 28/114 (24%), Positives = 54/114 (47%) Query: 33 NEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAANFPDPVDRAAQEEEFSLELRNRDRE 92 + ++ L A R+ LR + V + + D +D + + + + + E Sbjct: 3 RNEFIKKMQQRLIARRDALRRTIAGEVQSLYTSESGVVDELDTSLADANAEIGSQMVEVE 62 Query: 93 RKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAEIRE 146 + + +I++ ++K+ +G C+SCG I + RL+A P A CI+C E RE Sbjct: 63 SRELMQIDRAIEKMRAGRYGLCDSCGGPIKLIRLQAVPYAIECIECARRDERRE 116 >UniRef50_A6Q9W6 DnaK suppressor protein DksA n=1 Tax=Sulfurovum sp. NBC37-1 RepID=A6Q9W6_SULNB Length = 118 Score = 91.6 bits (226), Expect = 7e-18, Method: Composition-based stats. Identities = 30/117 (25%), Positives = 57/117 (48%), Gaps = 1/117 (0%) Query: 32 MNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAA-NFPDPVDRAAQEEEFSLELRNRD 90 + + +L F L R Q+ ++ T ++ + D D AA E +++ + Sbjct: 2 LTQEELKEFENKLLDRRVQIEKNLNGTALELEGMRNLDLNDEGDYAAASAETAVDSAILE 61 Query: 91 RERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAEIREK 147 ++RK + +I+ L K+++ +G CE C IG RLE + A CI C+ + E ++ Sbjct: 62 QQRKELAEIDLALDKIKNGTYGICEMCEEPIGKARLEVKNFARFCITCREINEKEQQ 118 >UniRef50_Q72G22 C4-type zinc finger protein, DksA/TraR family n=3 Tax=Desulfovibrio vulgaris RepID=Q72G22_DESVH Length = 176 Score = 91.2 bits (225), Expect = 8e-18, Method: Composition-based stats. Identities = 31/123 (25%), Positives = 53/123 (43%), Gaps = 6/123 (4%) Query: 21 EPYQEKPGEEYMNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAANFPDPVDRAAQEE 80 P + M + Q + R L+ + LR + D + A++ Sbjct: 44 HPLSATNEDTAMTDRQRSDIRDHLQRELDSLRR------AAIMGGYEPCADENEFASRLA 97 Query: 81 EFSLELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKT 140 E +L + R I +E L+++E D+G CE CG +I + RL+A P LC+ C+ Sbjct: 98 EMALSVTLLHRAEHRIGLLENALRRLEAYDYGVCEGCGEDIPVARLKASPATRLCVFCQQ 157 Query: 141 LAE 143 +E Sbjct: 158 ESE 160 >UniRef50_D1X2L9 Transcriptional regulator, TraR/DksA family n=5 Tax=Streptomyces RepID=D1X2L9_9ACTO Length = 248 Score = 91.2 bits (225), Expect = 8e-18, Method: Composition-based stats. Identities = 32/126 (25%), Positives = 59/126 (46%), Gaps = 5/126 (3%) Query: 26 KPGEEYMNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAANFPD-----PVDRAAQEE 80 +PGE+ ++A R +L + +LR E++ + + + D D + Sbjct: 123 RPGEDPWTPEEVAEARTLLTSETLRLRSELEASGAALAGLMRDSGDGAGDDEADTGTKNI 182 Query: 81 EFSLELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKT 140 EL ++++++ E+ L ++E +G CE CG IG R++A P A LC++ K Sbjct: 183 TREHELSLAANAQEMLEQTERALARLEAGTYGLCEICGKPIGKARMQAFPRATLCVEDKQ 242 Query: 141 LAEIRE 146 E R Sbjct: 243 KQERRG 248 >UniRef50_Q01U65 Transcriptional regulator, TraR/DksA family n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q01U65_SOLUE Length = 129 Score = 91.2 bits (225), Expect = 1e-17, Method: Composition-based stats. Identities = 33/115 (28%), Positives = 56/115 (48%), Gaps = 3/115 (2%) Query: 32 MNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAANFPDPVDRAAQEEEFSLELRNRDR 91 M + +L ++ +LEA + +L + ++ PD +D E L +RN DR Sbjct: 1 MTQTELNKYKAMLEAKQAELSAGLRNREDIAIEKT---PDAIDEVQLAGERELAIRNLDR 57 Query: 92 ERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAEIRE 146 E L++ ++ L +V D +G C C +I +RL+A P CI C+ A+ E Sbjct: 58 ESNLLRNVKGALVRVADGSYGVCMHCEEDIKPKRLDAVPWTKYCIKCQEAADRHE 112 >UniRef50_A6WCW5 Transcriptional regulator, TraR/DksA family n=10 Tax=Actinomycetales RepID=A6WCW5_KINRD Length = 159 Score = 91.2 bits (225), Expect = 1e-17, Method: Composition-based stats. Identities = 32/123 (26%), Positives = 54/123 (43%), Gaps = 4/123 (3%) Query: 27 PGEEYMNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAANF----PDPVDRAAQEEEF 82 EE A+L R L+ ++L E+ + + D VD A Sbjct: 37 DSEEAWTPAELDEVRVELQLEIDRLSAELAEASSSFSALVRSGEGAGDDQVDHGATTAGR 96 Query: 83 SLELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLA 142 E+ + R+L+++ ++ L ++ +G CESC +G RL+A P LC+ CK+ Sbjct: 97 EHEMTIVNNARELLEQTQRALVRLGSGVYGVCESCDGPVGKARLQAFPRVTLCVRCKSRG 156 Query: 143 EIR 145 E R Sbjct: 157 ERR 159 >UniRef50_Q2YD37 Transcriptional regulators, TraR/DksA family n=2 Tax=Nitrosomonadaceae RepID=Q2YD37_NITMU Length = 131 Score = 90.9 bits (224), Expect = 1e-17, Method: Composition-based stats. Identities = 36/121 (29%), Positives = 59/121 (48%), Gaps = 5/121 (4%) Query: 33 NEAQLAHFRRILEAW----RNQLRDEVDRTVTH-MQDEAANFPDPVDRAAQEEEFSLELR 87 E QLA + +L+ R ++RDE++ + D A + DP D + + + Sbjct: 5 TEEQLAQLKEVLQQRYLQLREEVRDELESSGDQHYADLAGSVADPGDASVADMLVDVGAN 64 Query: 88 NRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAEIREK 147 DR+ ++++E LK++ D D+G C CG EIG RL PTA C+ C+ + E Sbjct: 65 LVDRQVNEMREVEAALKRLADLDYGDCIDCGGEIGFDRLMVYPTAQRCVRCQEVHEKTYM 124 Query: 148 Q 148 Sbjct: 125 H 125 >UniRef50_A0RMM0 Transcriptional regulators, TraR/DksA family n=9 Tax=Campylobacterales RepID=A0RMM0_CAMFF Length = 122 Score = 90.9 bits (224), Expect = 1e-17, Method: Composition-based stats. Identities = 31/117 (26%), Positives = 57/117 (48%), Gaps = 1/117 (0%) Query: 32 MNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAANFP-DPVDRAAQEEEFSLELRNRD 90 M ++ L F+ +LE + Q+ + + + D D A+ + LE Sbjct: 1 MRQSDLEFFKNLLEERKIQINKNILDAADEINGLRQSGASDEFDFASINADAILEHSISA 60 Query: 91 RERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAEIREK 147 ++R + +I+++LKK+ + +G C+ C EI I RL+ +P A CI C+ + E K Sbjct: 61 KQRSELNEIDESLKKIANRTYGICDMCEDEIDIERLKVKPNAKYCITCREIIEKNNK 117 >UniRef50_B3ELW2 Transcriptional regulator, TraR/DksA family n=11 Tax=Chlorobiaceae RepID=B3ELW2_CHLPB Length = 147 Score = 90.9 bits (224), Expect = 1e-17, Method: Composition-based stats. Identities = 23/121 (19%), Positives = 55/121 (45%), Gaps = 7/121 (5%) Query: 31 YMNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAANFP-------DPVDRAAQEEEFS 83 Y+++ +L HF+++L R ++ +++ + + +E+ D + + Sbjct: 26 YLSDDELEHFKQLLLKRREEVLRDLEILKSSLSEESVEDSINSNYSMHMADHGTETMDRE 85 Query: 84 LELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAE 143 R+ K + I++ L+++ ++ +G C G I +RLEA P + I+ K + Sbjct: 86 QRFMFIARDEKYLGYIDQALERIRNKTYGVCAKSGKPIPKKRLEAVPHTSVRIEFKENKK 145 Query: 144 I 144 Sbjct: 146 K 146 >UniRef50_C6C0K2 Transcriptional regulator, TraR/DksA family n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6C0K2_DESAD Length = 116 Score = 90.5 bits (223), Expect = 1e-17, Method: Composition-based stats. Identities = 37/115 (32%), Positives = 57/115 (49%), Gaps = 4/115 (3%) Query: 32 MNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAANFPDPVDRAAQEEEFSLELRNRDR 91 MN +Q R+ LE +L + T + D + A++ E + L R Sbjct: 1 MNSSQRISIRQHLELKLAELIER----TTARDTAVESCADDNEYASRISEQKINLALHVR 56 Query: 92 ERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAEIRE 146 E KLI +E+TL +V++ DFG CE CG EI + R++A PT C+ C++ E Sbjct: 57 ETKLIIDMEETLSRVDNWDFGICEDCGEEIALARIKANPTTRFCVSCQSRMEEDH 111 >UniRef50_Q1Q506 Similar to DnaK suppressor protein n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1Q506_9BACT Length = 140 Score = 90.5 bits (223), Expect = 1e-17, Method: Composition-based stats. Identities = 31/124 (25%), Positives = 55/124 (44%), Gaps = 10/124 (8%) Query: 29 EEYMNEAQLAHFRRILEAWRNQLRDEVD---------RTVTHMQDEAANFPDPVDRAAQE 79 E+ M + + A +R++L + R +L +VD D + D Sbjct: 14 EKEM-KDEYAPYRKLLLSLREKLVGKVDYMQEETLKKSRQDASGDLSNVPIHMADVGTDN 72 Query: 80 EEFSLELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCK 139 E L + ++ I+ L+++E+ FG CE+C +I RL+A P A LC++C+ Sbjct: 73 YERELMIELMQSGEDSVRSIDDALERIEEGTFGICEACEKKINRERLKAVPYASLCVNCQ 132 Query: 140 TLAE 143 E Sbjct: 133 REEE 136 >UniRef50_D2R7B0 Transcriptional regulator, TraR/DksA family n=2 Tax=Planctomycetaceae RepID=D2R7B0_9PLAN Length = 123 Score = 90.5 bits (223), Expect = 2e-17, Method: Composition-based stats. Identities = 21/91 (23%), Positives = 38/91 (41%), Gaps = 1/91 (1%) Query: 53 DEVDRTVTHMQDEAANFP-DPVDRAAQEEEFSLELRNRDRERKLIKKIEKTLKKVEDEDF 111 + +T + + ++ P D E L + + +++IE L+++E + Sbjct: 30 AALGKTRSENSGDLSSMPIHMADVGTDNFEQEFTLSLMEHDGSTLEQIEAALERIEAGAY 89 Query: 112 GYCESCGVEIGIRRLEARPTADLCIDCKTLA 142 G C CG +I RLE P C+ C A Sbjct: 90 GVCTECGCKIPKARLEVLPYTAHCVKCAEKA 120 >UniRef50_A4XDN2 Zinc finger, DksA/TraR C4-type n=5 Tax=Actinomycetales RepID=A4XDN2_SALTO Length = 139 Score = 90.1 bits (222), Expect = 2e-17, Method: Composition-based stats. Identities = 36/119 (30%), Positives = 63/119 (52%), Gaps = 6/119 (5%) Query: 33 NEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDE------AANFPDPVDRAAQEEEFSLEL 86 + A+ R L A R++LR E D+T++ + + + D D + E E+ Sbjct: 21 SAAETEKIRAALAARRDELRAEYDQTLSEITELQRDRLTDSAGDDQADTGTKTFEREQEI 80 Query: 87 RNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAEIR 145 + + I ++E+ L+++++ +G+CE CG I + RL A P+A LC+ CK LAE R Sbjct: 81 SLANSILERITQVERALERLDEGGYGWCERCGNPIPVERLAAFPSATLCVTCKQLAERR 139 >UniRef50_C7LTL7 Transcriptional regulator, TraR/DksA family n=1 Tax=Desulfomicrobium baculatum DSM 4028 RepID=C7LTL7_DESBD Length = 133 Score = 90.1 bits (222), Expect = 2e-17, Method: Composition-based stats. Identities = 29/102 (28%), Positives = 47/102 (46%) Query: 43 ILEAWRNQLRDEVDRTVTHMQDEAANFPDPVDRAAQEEEFSLELRNRDRERKLIKKIEKT 102 L ++ +E + M PD D+A + +R KL+K I Sbjct: 14 QLREKFRKIEEENESLRDVMSQNRELEPDLADQACSASSRDWNVIRYNRNVKLLKDITVA 73 Query: 103 LKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAEI 144 LK ++++ +G CE CG I RRL A P+A CI+C+ + + Sbjct: 74 LKAIDNDSYGICEMCGEHIADRRLLAIPSALFCIECQEMIDR 115 >UniRef50_C9RQK2 Transcriptional regulator, TraR/DksA family n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RQK2_FIBSS Length = 157 Score = 90.1 bits (222), Expect = 2e-17, Method: Composition-based stats. Identities = 33/122 (27%), Positives = 51/122 (41%), Gaps = 7/122 (5%) Query: 32 MNEAQLAHFRRILEAWRNQLRDEVDRTVTHM-------QDEAANFPDPVDRAAQEEEFSL 84 M++A L F +L R +L + Q + D A Sbjct: 9 MSDADLKFFEEMLLEKRRELVTAQSDSEKANVFLDQKNQSGDGGDSEGADSATDINSLET 68 Query: 85 ELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAEI 144 L RE K + +E+ LK++++ FG C+ CG I RL A PTA C++CK + Sbjct: 69 NLSLAAREGKYLVYLEEALKRIKNGTFGVCKICGQLIPKARLMAVPTATKCVNCKEETKK 128 Query: 145 RE 146 +E Sbjct: 129 KE 130 >UniRef50_C6HWS3 Transcriptional regulator, TraR/DksA family n=3 Tax=Leptospirillum RepID=C6HWS3_9BACT Length = 121 Score = 89.7 bits (221), Expect = 2e-17, Method: Composition-based stats. Identities = 42/112 (37%), Positives = 65/112 (58%), Gaps = 1/112 (0%) Query: 37 LAHFRRILEAWRNQLRDEVDRTVTHMQDEA-ANFPDPVDRAAQEEEFSLELRNRDRERKL 95 R ILE + ++ V+RT+ ++ FPDP D A+ EE R ++RE+KL Sbjct: 4 YEKVREILEQQKREILSGVERTLQTGVEKGVELFPDPADLASVEEIQGFSYRLKEREKKL 63 Query: 96 IKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAEIREK 147 ++KI++ L+++E+ FG CE CG I +R+ ARP CI CKT+ E E+ Sbjct: 64 LRKIDEALERIEEGSFGICERCGEAIEEKRMLARPVTTYCIACKTILEEAER 115 >UniRef50_C1F3S7 Putative RNA polymerase-binding protein DksA n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F3S7_ACIC5 Length = 139 Score = 89.7 bits (221), Expect = 3e-17, Method: Composition-based stats. Identities = 30/108 (27%), Positives = 47/108 (43%), Gaps = 1/108 (0%) Query: 37 LAHFRRILEAWRNQLRDEVDRTVTHMQD-EAANFPDPVDRAAQEEEFSLELRNRDRERKL 95 ++ L + +L V TV ++ E N DP D+A + L + Sbjct: 21 RKTLQQKLVEQKTELERSVLATVRQGREPEMENRIDPADQAVMSYQQELIFSQGTNKHTQ 80 Query: 96 IKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAE 143 + + L+++ED +G C CG +I RRLEA P CI C+ E Sbjct: 81 LSLVRLALERLEDGSYGECAECGEDISPRRLEAVPWTPYCISCQEKVE 128 >UniRef50_C1A882 Putative uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A882_GEMAT Length = 127 Score = 89.3 bits (220), Expect = 3e-17, Method: Composition-based stats. Identities = 30/126 (23%), Positives = 49/126 (38%), Gaps = 10/126 (7%) Query: 32 MNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAANFPDP--------VDRAAQEEEFS 83 M + QL +F + L R ++ E+ A D D+ E Sbjct: 1 MPKKQLQYFEKRLLDERKRVLKELGHHGEAFGPNADAENDDSSAYSFHMADQGTDAMERE 60 Query: 84 LELRNRDRERKLIKKIEKTLKKVEDE--DFGYCESCGVEIGIRRLEARPTADLCIDCKTL 141 +E + + +++ L+++ FG C CG +I RL+A P A CI CK Sbjct: 61 KAFLFASKEGRFLWHLDQALRRLYKAPATFGKCHQCGEDIAFERLDALPNARYCIACKQR 120 Query: 142 AEIREK 147 E +K Sbjct: 121 EEDAKK 126 >UniRef50_Q9K9V1 BH2544 protein n=2 Tax=Bacillus RepID=Q9K9V1_BACHD Length = 220 Score = 89.3 bits (220), Expect = 3e-17, Method: Composition-based stats. Identities = 24/115 (20%), Positives = 45/115 (39%), Gaps = 12/115 (10%) Query: 35 AQLAHFRRILEAWRNQLRDEVDRTVT------------HMQDEAANFPDPVDRAAQEEEF 82 Q A R L + L + ++ + + P D A E Sbjct: 2 QQYAELRERLTERKAALEQRLKQSGELGMQEEKGTLSGSTGELSQYDNHPADTATDLYER 61 Query: 83 SLELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCID 137 ++ ++ + ++I++ L ++E+ +G CE G +I RLEA PTA + Sbjct: 62 EKDIALYEQMSREYEEIKQALDRMENGTYGICERTGEQIPYERLEANPTARTTVA 116 >UniRef50_A6DK24 DnaK suppressor, putative n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DK24_9BACT Length = 147 Score = 89.3 bits (220), Expect = 3e-17, Method: Composition-based stats. Identities = 27/107 (25%), Positives = 47/107 (43%), Gaps = 1/107 (0%) Query: 38 AHFRRILEAWRNQLRDEVDRTVT-HMQDEAANFPDPVDRAAQEEEFSLELRNRDRERKLI 96 L A R QL D+V ++Q E D D + + L E + Sbjct: 23 KQRYEQLLALRAQLVDQVSMLNGVNLQVERNAGEDGGDVGSDNFMREINLNVMSDEGIKV 82 Query: 97 KKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAE 143 + +++ ++++++ +G C C +I RL+A P A LC+ CK E Sbjct: 83 QLVQQAIERLDEGKYGRCVDCRDDIPEARLDAIPYAKLCVACKETRE 129 >UniRef50_B8DQJ2 Transcriptional regulator, TraR/DksA family n=1 Tax=Desulfovibrio vulgaris str. 'Miyazaki F' RepID=B8DQJ2_DESVM Length = 142 Score = 88.9 bits (219), Expect = 4e-17, Method: Composition-based stats. Identities = 37/129 (28%), Positives = 61/129 (47%), Gaps = 5/129 (3%) Query: 15 LAIAGVEPYQEKPGEEYMNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAANFPDPVD 74 + G E M + A RR LEA LR ++ ++ D + Sbjct: 3 RSPRGPPASAAPRKERAMTDRHHAEIRRRLEAELTHLRRQL-----LVEGGVEACADENE 57 Query: 75 RAAQEEEFSLELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADL 134 A++ E +L + DR + I++IE L+ ++ D+G C++CG +I + RL ARPT L Sbjct: 58 FASRVSELTLSMTLLDRAGRRIREIEGVLRAMDSRDYGVCDACGDDIPLPRLLARPTTRL 117 Query: 135 CIDCKTLAE 143 C+ C+ E Sbjct: 118 CVHCQMEQE 126 >UniRef50_C1ZKC1 DnaK suppressor protein n=1 Tax=Planctomyces limnophilus DSM 3776 RepID=C1ZKC1_PLALI Length = 152 Score = 88.9 bits (219), Expect = 4e-17, Method: Composition-based stats. Identities = 25/107 (23%), Positives = 48/107 (44%) Query: 37 LAHFRRILEAWRNQLRDEVDRTVTHMQDEAANFPDPVDRAAQEEEFSLELRNRDRERKLI 96 +A ++ L R LR ++ + D + AA E+ L + E + + Sbjct: 7 VAKIKKHLLLQREDLRSKIAEEMGLAYSPDDGINDLGETAALVEQSELHTQLAALETREL 66 Query: 97 KKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAE 143 +I + L +E+ +G C+ C I + RL+A P +C++C+ E Sbjct: 67 MQINRALALIEEGHYGVCQKCSKAIPLARLQAVPFTTVCVECQRRQE 113 >UniRef50_Q7UR73 Probable DnaK suppressor protein n=1 Tax=Rhodopirellula baltica RepID=Q7UR73_RHOBA Length = 140 Score = 88.9 bits (219), Expect = 4e-17, Method: Composition-based stats. Identities = 33/114 (28%), Positives = 55/114 (48%), Gaps = 1/114 (0%) Query: 33 NEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDE-AANFPDPVDRAAQEEEFSLELRNRDR 91 + L R L R+ LR ++ ++ +Q+ D +D AA + L + + Sbjct: 3 RDDTLKTLRITLLRRRDALRKALEGDLSLLQELHNQKTGDALDAAADTVQDELNSQLVEV 62 Query: 92 ERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAEIR 145 E + + IE+ + + E+ FG CE CG I + RL+A P A CI+C+ AE Sbjct: 63 ESRELLAIEEAIARFEEGRFGDCEDCGKPIPLNRLKAIPYAVDCINCRRAAERE 116 >UniRef50_A5UPY9 Transcriptional regulator, TraR/DksA family n=2 Tax=Roseiflexus RepID=A5UPY9_ROSS1 Length = 121 Score = 88.5 bits (218), Expect = 6e-17, Method: Composition-based stats. Identities = 31/113 (27%), Positives = 51/113 (45%), Gaps = 3/113 (2%) Query: 38 AHFRRILEAWRNQLRDEVDRTVTHMQDEAANFPDPVDRAAQEEE---FSLELRNRDRERK 94 A R LEA R+ L E+ + A + E +L R R+ Sbjct: 8 AAQRERLEAERDALLAEIAALERERASREESAGIGNVVAEEMMETLVRERDLALRSNARE 67 Query: 95 LIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAEIREK 147 L++++ L+++++ +G C CG I I RLEA P A LC+ C++ E + Sbjct: 68 LLEQVNAALRRLDEGTYGICADCGEPIPIERLEALPYATLCVRCQSTRERARR 120 >UniRef50_D0D572 Transcriptional regulator, TraR/DksA family n=1 Tax=Citreicella sp. SE45 RepID=D0D572_9RHOB Length = 130 Score = 88.5 bits (218), Expect = 6e-17, Method: Composition-based stats. Identities = 22/103 (21%), Positives = 44/103 (42%), Gaps = 2/103 (1%) Query: 37 LAHFRRILEAWRNQLRDEVDRTVTHMQDEAANFPDPVDRAAQEEEFSLELRNRDRERKLI 96 + +L +L+ ++ + + + D A + E + + I Sbjct: 25 HDKHKAMLLKRLEELKTRLEGIEDSLDEPKPSDWDES--ATEREGDEVLESLGTSGQAEI 82 Query: 97 KKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCK 139 +IE L+++++ ++GYC +CG I RL+ P A LC C Sbjct: 83 GRIEAALRRMDEGEYGYCLTCGEAISEARLDILPDAPLCAACA 125 >UniRef50_Q48NH0 RNA polymerase-binding protein DksA n=2 Tax=Pseudomonas syringae group RepID=Q48NH0_PSE14 Length = 138 Score = 88.2 bits (217), Expect = 7e-17, Method: Composition-based stats. Identities = 34/135 (25%), Positives = 62/135 (45%), Gaps = 2/135 (1%) Query: 15 LAIAGVEPYQEKPGEEYMNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAANFPDPVD 74 +A+ V+ + +EYM+ QL F+ LE +LRD + + E PD D Sbjct: 1 MALMSVDQLLNQAEDEYMSVDQLVFFKDRLEVKAAELRDRL--LSCQVSCEIERHPDEAD 58 Query: 75 RAAQEEEFSLELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADL 134 A+ EE ++ +R+R+ + + K L+ + D+G+ + G IGI+RL P + Sbjct: 59 FASDEENRAVAASMIERDRQTLSHVLKALEILALGDYGFFQETGEAIGIKRLLLVPESLY 118 Query: 135 CIDCKTLAEIREKQM 149 ++ E + Sbjct: 119 SVESMRALEAKGMHQ 133 >UniRef50_A0LGY5 Transcriptional regulator, TraR/DksA family n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LGY5_SYNFM Length = 257 Score = 87.8 bits (216), Expect = 9e-17, Method: Composition-based stats. Identities = 32/115 (27%), Positives = 56/115 (48%), Gaps = 1/115 (0%) Query: 32 MNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAANFPDPVDRAAQEEEFSLELRNRDR 91 M++ + + R +L R ++ D V+R + + + A + R Sbjct: 1 MDKRDILYLRNMLIVRRKEISDRVNRLAAVWK-GVEPAIELEEEAQKASITEPYQRLDAN 59 Query: 92 ERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAEIRE 146 +K +++I+ L K+ ++G CESCG +I ++RLEA P A LC+DC E R Sbjct: 60 RKKEVEQIDLALGKIAIGEYGICESCGDDIALKRLEAIPWARLCVDCARDFEQRH 114 >UniRef50_A0LMB8 Transcriptional regulator, TraR/DksA family n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LMB8_SYNFM Length = 122 Score = 87.8 bits (216), Expect = 1e-16, Method: Composition-based stats. Identities = 34/118 (28%), Positives = 55/118 (46%), Gaps = 2/118 (1%) Query: 32 MNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAANFP--DPVDRAAQEEEFSLELRNR 89 M++ +F IL ++ + + M D VDR + E L Sbjct: 1 MDKELSVYFHDILIKRLMEVFPAMRGRLLKMAGMGTVHDPMDEVDRTSIRTEQEFLLHMH 60 Query: 90 DRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAEIREK 147 R +L+++I L+++ DFG CE CG +I + RL+A P+A CI CK AE + + Sbjct: 61 CRNERLVQEILNGLQRIRTGDFGVCEECGKDIELNRLKAHPSATQCIKCKKAAERKAR 118 >UniRef50_Q029W8 Transcriptional regulator, TraR/DksA family n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q029W8_SOLUE Length = 149 Score = 87.4 bits (215), Expect = 1e-16, Method: Composition-based stats. Identities = 29/120 (24%), Positives = 53/120 (44%), Gaps = 2/120 (1%) Query: 27 PGEEYMNEAQLAHFRRILEAWRNQLRDEVD-RTVTHMQDEAANFPDPVDRAAQEEEFSLE 85 E+ M + + A +R+ILE ++R + + + D D + Q E + Sbjct: 16 STEKPM-KPKTATYRKILEKKAEEVRRSMSAQKAAQVVARLDIPSDEGDLSQQHHEEWIF 74 Query: 86 LRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAEIR 145 L + KL+++I L +++ +G C C I +RL+A P A C+ C+ R Sbjct: 75 LNRNTIDMKLLREIADALHRMDTGHYGVCPECEEPISAKRLDAVPWARYCVTCQEKIAAR 134 >UniRef50_Q0AHN9 Transcriptional regulators, TraR/DksA family protein n=3 Tax=Proteobacteria RepID=Q0AHN9_NITEC Length = 135 Score = 87.4 bits (215), Expect = 1e-16, Method: Composition-based stats. Identities = 26/122 (21%), Positives = 49/122 (40%), Gaps = 5/122 (4%) Query: 28 GEEYMNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQ-----DEAANFPDPVDRAAQEEEF 82 E + + Q+ HF + ++A ++ L E+ + + + D D D A Sbjct: 4 PENSLTKEQITHFAQRIDARKSLLLGEIRQVLARSRNEYYVDLIGGAGDSGDTATASLLR 63 Query: 83 SLELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLA 142 + R+ ++ I ++ +G C CG + +RL+A PTA C C+ Sbjct: 64 DITEAEVIRDIGEVRDIVAAEDRIATGKYGLCIDCGEPVRYKRLDAYPTAKRCFTCQVRR 123 Query: 143 EI 144 E Sbjct: 124 ER 125 >UniRef50_A9AKZ2 Transcriptional regulator, TraR/DksA family n=5 Tax=Burkholderia multivorans RepID=A9AKZ2_BURM1 Length = 256 Score = 87.4 bits (215), Expect = 1e-16, Method: Composition-based stats. Identities = 31/126 (24%), Positives = 51/126 (40%), Gaps = 5/126 (3%) Query: 25 EKPGEEYMNEAQLAHFRRILEAWRNQLRDEVD-----RTVTHMQDEAANFPDPVDRAAQE 79 E+ ++E Q + L LR E+ R + A PD D A + Sbjct: 122 EQETAMALDERQRHALLQQLNECEQALRAELRASEDQRASESYAELAGASPDEGDEANAD 181 Query: 80 EEFSLELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCK 139 ++ + ++ I + +++ D +G C C +G RL ARPTA+ C C+ Sbjct: 182 LFVDVDHALIGMKLAELRAIRRAQQRMVDGSYGDCIDCDGPVGYARLRARPTAERCTHCQ 241 Query: 140 TLAEIR 145 L E R Sbjct: 242 ALYERR 247 >UniRef50_A2SLK5 Putative DNA-binding protein n=1 Tax=Methylibium petroleiphilum PM1 RepID=A2SLK5_METPP Length = 122 Score = 87.0 bits (214), Expect = 2e-16, Method: Composition-based stats. Identities = 33/121 (27%), Positives = 57/121 (47%), Gaps = 4/121 (3%) Query: 32 MNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAANFPDP----VDRAAQEEEFSLELR 87 MN A R L A +LRDE+ + + AA + + AA + E L++ Sbjct: 1 MNTRPCADLRDDLLAREARLRDELRAHRARLLEPAAATGNTFVAGSEGAAADAEDELDIT 60 Query: 88 NRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAEIREK 147 ++ + ++ L+++ +G+CE CG IG+ RL A P A C+DC+ A+ Sbjct: 61 LISHWQRELDEVSAALQRLNTGSYGHCERCGEPIGLPRLRALPEARHCLDCQEQADRAVH 120 Query: 148 Q 148 + Sbjct: 121 R 121 >UniRef50_UPI0001C4239D hypothetical protein BpOF4_09730 n=1 Tax=Bacillus pseudofirmus OF4 RepID=UPI0001C4239D Length = 215 Score = 87.0 bits (214), Expect = 2e-16, Method: Composition-based stats. Identities = 28/117 (23%), Positives = 45/117 (38%), Gaps = 9/117 (7%) Query: 32 MNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQ---------DEAANFPDPVDRAAQEEEF 82 + QL L + ++ D V + + + P D A + + Sbjct: 2 LTNEQLQTLENKLLQMKKEIEDRVSDDTSEADLENQGEDTGELSNYDNHPGDLATELHDR 61 Query: 83 SLELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCK 139 LE + +++I + L +ED +G CE CG I RLEA PTA I+ Sbjct: 62 ELEAALDQHSKDELEEINQALAAIEDGTYGICEVCGEPIPFERLEALPTARRRIEHA 118 >UniRef50_Q39WX5 Transcriptional regulators, TraR/DksA family n=4 Tax=Geobacter RepID=Q39WX5_GEOMG Length = 130 Score = 86.6 bits (213), Expect = 2e-16, Method: Composition-based stats. Identities = 29/117 (24%), Positives = 53/117 (45%), Gaps = 5/117 (4%) Query: 32 MNEAQLAHFRRILEAWRNQLRDEVDRTV-----THMQDEAANFPDPVDRAAQEEEFSLEL 86 M+ + +L A + +L EV R + +Q + D DR + + Sbjct: 4 MSRERQERLMELLLAEKRRLWGEVRRELFGQVGGELQSQNDLPQDVGDRGLIDTLEDTGM 63 Query: 87 RNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAE 143 D R+ + ++++ L ++++ +G+C+ CG EI RL P A CI C+T E Sbjct: 64 AVADIRRQELTRMDEALGRLKEGRYGFCDECGAEIDEGRLRVAPYAPCCISCQTRRE 120 >UniRef50_Q221D7 Transcriptional regulators, TraR/DksA family n=3 Tax=Comamonadaceae RepID=Q221D7_RHOFD Length = 124 Score = 86.6 bits (213), Expect = 2e-16, Method: Composition-based stats. Identities = 30/124 (24%), Positives = 49/124 (39%), Gaps = 5/124 (4%) Query: 32 MNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAANFPD-----PVDRAAQEEEFSLEL 86 M + F+ L A R L ++ A + A + LE Sbjct: 1 MTQKLNTTFKEQLLAQRASLLAQLSDLRGGTVGRAEASAEHFGQKEDSTAQESSARELEF 60 Query: 87 RNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAEIRE 146 R+ + + +++ L+++ED +G C CGV I RL A P A CI C+ E + Sbjct: 61 ALDARDSEELDRLDAALRRIEDGSYGLCVDCGVGIPAARLHAAPDALRCIACQEKLEKAQ 120 Query: 147 KQMA 150 + A Sbjct: 121 ARQA 124 >UniRef50_A3IED4 DnaK suppressor protein n=2 Tax=Bacillaceae RepID=A3IED4_9BACI Length = 150 Score = 86.6 bits (213), Expect = 2e-16, Method: Composition-based stats. Identities = 27/113 (23%), Positives = 50/113 (44%), Gaps = 1/113 (0%) Query: 32 MNEAQLAHFRRILEAWRNQLRDEVDRTVT-HMQDEAANFPDPVDRAAQEEEFSLELRNRD 90 M++ + +R LE ++ +D + + + P D A+ + E+ + Sbjct: 1 MDQQVMQKLKRQLEQELQEIEKRIDESERPQATELSNYDNHPADNASDLTDQLTEMAIDE 60 Query: 91 RERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAE 143 ++I++ L+ + D +G C CG EI I RLEA P A C++ E Sbjct: 61 HRGDNAEEIKEALQAMADGTYGECTVCGKEIPIGRLEAMPQALTCVEHAEKKE 113 >UniRef50_B2V854 Transcriptional regulator, TraR/DksA family n=4 Tax=Hydrogenothermaceae RepID=B2V854_SULSY Length = 147 Score = 86.6 bits (213), Expect = 2e-16, Method: Composition-based stats. Identities = 34/115 (29%), Positives = 60/115 (52%), Gaps = 3/115 (2%) Query: 32 MNEAQLAHFRRILEAWRNQLRDEV---DRTVTHMQDEAANFPDPVDRAAQEEEFSLELRN 88 M++ +L FRR+L R+Q+ + + T + +++A D + A + + + Sbjct: 1 MDKNKLQKFRRLLLKKRSQILERYLKKEETEKVLTEQSAEPRDLEEYANIDITEEILAQL 60 Query: 89 RDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAE 143 D E +++K I+ TL+++++ +G CE CG EI RLEA P LCI E Sbjct: 61 SDVEIEILKAIDDTLERIQNGTYGICEVCGKEIEEERLEAVPWTTLCIQHAKEQE 115 >UniRef50_Q3A5P4 DnaK suppressor protein n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A5P4_PELCD Length = 127 Score = 86.6 bits (213), Expect = 2e-16, Method: Composition-based stats. Identities = 33/121 (27%), Positives = 50/121 (41%), Gaps = 1/121 (0%) Query: 32 MNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDE-AANFPDPVDRAAQEEEFSLELRNRD 90 M + +L R+ L R E+ R D D+ + D Sbjct: 1 MIQKRLESIRKKLLDLREARLQEIRRQNADAAALIDEGVADTADQGLTDSLKDYLHLLGD 60 Query: 91 RERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAEIREKQMA 150 R+ I +I++ L+++ D +G CE+CG I I RLE P C+ C+ AE K A Sbjct: 61 AGREEILEIDEALERLRDGSYGRCEACGKTIDIARLEILPFTRRCLTCRQEAEKEAKTKA 120 Query: 151 G 151 G Sbjct: 121 G 121 >UniRef50_D1BG79 DnaK suppressor protein n=1 Tax=Sanguibacter keddieii DSM 10542 RepID=D1BG79_SANKS Length = 129 Score = 86.2 bits (212), Expect = 2e-16, Method: Composition-based stats. Identities = 27/108 (25%), Positives = 44/108 (40%) Query: 33 NEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAANFPDPVDRAAQEEEFSLELRNRDRE 92 + L RR L ++ E+ D + + A ++S R Sbjct: 18 SAPLLDERRRALLDELARVDGELRTVREAKTDGTDDDEHDPEGATMSTQWSHATGLRSAV 77 Query: 93 RKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKT 140 +++++ L ++ +G C CG I RLEARP+A LCIDC Sbjct: 78 VLQLEEVDGALARIAAGTYGTCTRCGRPISAGRLEARPSAPLCIDCAR 125 >UniRef50_C4KZG3 Transcriptional regulator, TraR/DksA family n=2 Tax=Exiguobacterium RepID=C4KZG3_EXISA Length = 183 Score = 86.2 bits (212), Expect = 3e-16, Method: Composition-based stats. Identities = 23/113 (20%), Positives = 48/113 (42%), Gaps = 2/113 (1%) Query: 30 EYMNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQD--EAANFPDPVDRAAQEEEFSLELR 87 + + E Q+ F++ L + + +D + + P D + + Sbjct: 2 DMLTEEQIETFKKRLLKEKAKTEGYMDSREETYDEGELSHYDNHPADSGEELFLRERDQA 61 Query: 88 NRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKT 140 + + + + ++K L +++ +G CE CG +I + RLE P A LCI+ Sbjct: 62 LNELDEEFLSDVDKALLAIQNGTYGKCEVCGKDIELDRLEVIPEATLCIEHAR 114 >UniRef50_A4BMT6 Putative uncharacterized protein n=1 Tax=Nitrococcus mobilis Nb-231 RepID=A4BMT6_9GAMM Length = 132 Score = 86.2 bits (212), Expect = 3e-16, Method: Composition-based stats. Identities = 34/122 (27%), Positives = 50/122 (40%), Gaps = 5/122 (4%) Query: 30 EYMNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEA-----ANFPDPVDRAAQEEEFSL 84 E + Q +R LE L V + + PD D + + L Sbjct: 3 ESLTPEQRRELQRRLEEDYKALCANVREELLSSDQNSYAVLADKVPDVGDASVADLLVDL 62 Query: 85 ELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAEI 144 + DR + I++IE L+K+ D +GYC CG I +RL+A P C C+T E Sbjct: 63 NIAEIDRHVREIQRIEAALRKLADGSYGYCMDCGEAIAAQRLQANPAVARCYACQTRFEQ 122 Query: 145 RE 146 E Sbjct: 123 EE 124 >UniRef50_Q02C95 Transcriptional regulator, TraR/DksA family n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q02C95_SOLUE Length = 128 Score = 85.8 bits (211), Expect = 4e-16, Method: Composition-based stats. Identities = 27/115 (23%), Positives = 48/115 (41%), Gaps = 4/115 (3%) Query: 25 EKPGEEYMNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAANFPDPVDRAAQEEEFSL 84 K GE+ + + R L R + + D D+A + + Sbjct: 1 MKKGEKALRPQDI--HRAKLLEKRASVLSGLGMKFDTRARMGRVAED--DQAQISHDEFV 56 Query: 85 ELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCK 139 LR + + ++ +E+ L ++E DFG C +C I +RL+A P A C+ C+ Sbjct: 57 SLRMNGLDYRQLRMVEEALDRLESGDFGICLACDESIAEKRLQALPWARYCVKCQ 111 >UniRef50_B8J655 Transcriptional regulator, TraR/DksA family n=3 Tax=Anaeromyxobacter RepID=B8J655_ANAD2 Length = 122 Score = 85.5 bits (210), Expect = 4e-16, Method: Composition-based stats. Identities = 51/120 (42%), Positives = 65/120 (54%), Gaps = 4/120 (3%) Query: 32 MNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAANF----PDPVDRAAQEEEFSLELR 87 MN + +RRIL A L + +R V M D PDP DRA EE + LR Sbjct: 1 MNARETERYRRILAAQLEALVGQGERAVHEMADSEGGGEVAIPDPNDRATAEERRNWALR 60 Query: 88 NRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAEIREK 147 RDR+R+L+ K++ L +++ FG C SCG I RL ARP DLCI CKT AE E+ Sbjct: 61 LRDRDRRLLGKVQAALARLDAGTFGTCTSCGAPISAARLRARPVTDLCIACKTEAERVER 120 >UniRef50_A1DZZ7 DnaK suppressor protein n=1 Tax=Halobacillus halophilus RepID=A1DZZ7_SPOHA Length = 227 Score = 85.5 bits (210), Expect = 4e-16, Method: Composition-based stats. Identities = 23/125 (18%), Positives = 48/125 (38%), Gaps = 11/125 (8%) Query: 36 QLAHFRRILEAWRNQLRDEVDRTVT-----------HMQDEAANFPDPVDRAAQEEEFSL 84 H+++ LE + ++ + + + + P D ++ E Sbjct: 2 DYEHYKKQLEERQMEIETRLLEKNSLGIERGFASDMASGELSQYDNHPADSGSELYEREK 61 Query: 85 ELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAEI 144 ++ ++ + IE +L +++ +G CE G I RLEA PTA T E+ Sbjct: 62 DIALLGHLKEELSDIEYSLNQMKAGKYGICEKTGKPIPNERLEAFPTARTVSQASTNQEM 121 Query: 145 REKQM 149 + + Sbjct: 122 SKDRP 126 >UniRef50_A1B0I3 Transcriptional regulator, TraR/DksA family n=9 Tax=Rhodobacterales RepID=A1B0I3_PARDP Length = 106 Score = 85.1 bits (209), Expect = 6e-16, Method: Composition-based stats. Identities = 23/102 (22%), Positives = 43/102 (42%), Gaps = 2/102 (1%) Query: 39 HFRRILEAWRNQLRDEVDRTVTHMQDEAANFPDPVDRAAQEEEFSLELRNRDRERKLIKK 98 + +L A R L ++ + D D D A ++E+ + + + + Sbjct: 5 ARKALLTARRQALLVDLANIRDQLDDPLPQDWD--DAAIEQEDDEVLQALGHAHQAELNR 62 Query: 99 IEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKT 140 I+ L++++ D+G+C CG I RL+ P LC C Sbjct: 63 IDAALRRIDSGDYGFCAGCGDVILPARLDLLPDTPLCAHCAA 104 >UniRef50_A6U730 Transcriptional regulator, TraR/DksA family n=4 Tax=Rhizobiaceae RepID=A6U730_SINMW Length = 114 Score = 85.1 bits (209), Expect = 6e-16, Method: Composition-based stats. Identities = 28/111 (25%), Positives = 43/111 (38%), Gaps = 2/111 (1%) Query: 32 MNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAANFPDPVDRAAQEEEFSLELRNRDR 91 M++ L FR L + +L + + ++ D DR + E + Sbjct: 1 MDKYALDDFREQLLRRKRELYGRLVKIEEDLEQPMN--ADVPDRVTERESDEVLEGLGLA 58 Query: 92 ERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLA 142 + I+ I+ L ++E FG C CG I RL A P A LC C Sbjct: 59 GQGEIRAIDAALNRIEAGTFGICARCGDAISPERLRAVPHAPLCQTCAAEL 109 >UniRef50_D0LJW3 Transcriptional regulator, TraR/DksA family n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LJW3_HALO1 Length = 142 Score = 85.1 bits (209), Expect = 6e-16, Method: Composition-based stats. Identities = 33/142 (23%), Positives = 64/142 (45%), Gaps = 1/142 (0%) Query: 7 RKTSSLSILAIAGVEPYQEKPGEEYMNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEA 66 K +S A P + ++ QL L +L +E+ R ++ + A Sbjct: 1 MKDASRETAASEAAGPVLRADPDASLSAKQLRALYDKLRGEEARLAEEIRRHISEATE-A 59 Query: 67 ANFPDPVDRAAQEEEFSLELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRL 126 PD D+A+Q + LR D++ K ++++ + L+K++ ++G CE G IG++RL Sbjct: 60 ERHPDEGDQASQNANQAYLLRYADKQNKQLQQVRRALQKLQTGEYGVCEGSGEPIGVQRL 119 Query: 127 EARPTADLCIDCKTLAEIREKQ 148 RP ++ K + + Sbjct: 120 MLRPWTRYSVEYKEQIDRERRH 141 >UniRef50_B8H9G6 Transcriptional regulator, TraR/DksA family n=3 Tax=Micrococcineae RepID=B8H9G6_ARTCA Length = 118 Score = 85.1 bits (209), Expect = 6e-16, Method: Composition-based stats. Identities = 29/114 (25%), Positives = 43/114 (37%), Gaps = 7/114 (6%) Query: 35 AQLAHFRRILEAWRN-------QLRDEVDRTVTHMQDEAANFPDPVDRAAQEEEFSLELR 87 A FR +LE R LR ++ + Q + + A E S Sbjct: 2 ADYERFRLLLEEERQLKLALLPALRADIAAANSARQGANVDDEHDPEGATIAFELSQASA 61 Query: 88 NRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTL 141 ++ + ++E L ++ D +G C CG I RLEARP CID Sbjct: 62 LLNQSSAGLDQVEAALTRIADGTYGSCAVCGRPIAEGRLEARPWTPYCIDHAAA 115 >UniRef50_A1K6D2 Conserved hypothetical DnaK suppressor protein n=2 Tax=Betaproteobacteria RepID=A1K6D2_AZOSB Length = 135 Score = 85.1 bits (209), Expect = 7e-16, Method: Composition-based stats. Identities = 30/122 (24%), Positives = 55/122 (45%), Gaps = 5/122 (4%) Query: 30 EYMNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQD-----EAANFPDPVDRAAQEEEFSL 84 ++N+ ++A +L+ L+ V V+ + + D D+A Sbjct: 2 NHLNDDEIAALGALLDERERALKSGVHEHVSRLLEGGQPGLTTPAGDAADQAEVGLTREH 61 Query: 85 ELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAEI 144 E R+ + ++ IE +++ + + G C CG EI RLEA+PTA C+ C++L E Sbjct: 62 ENLAVVRDVRELRDIEAARERIAEGEAGICVDCGEEIPFARLEAQPTATRCVRCQSLYER 121 Query: 145 RE 146 Sbjct: 122 TH 123 >UniRef50_C9NIY3 Transcriptional regulator, TraR/DksA family n=3 Tax=Streptomyces RepID=C9NIY3_9ACTO Length = 131 Score = 85.1 bits (209), Expect = 7e-16, Method: Composition-based stats. Identities = 30/114 (26%), Positives = 48/114 (42%) Query: 27 PGEEYMNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAANFPDPVDRAAQEEEFSLEL 86 PG+ +L RR EA L + D V A + + ++ E + Sbjct: 14 PGDRISVRERLDAERRDTEARIAALHGDFDAIVEANALVAVDDEHDPEGSSTAFERAHTA 73 Query: 87 RNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKT 140 R R + ++++ L+++E D+G CE C I RLE RP A C+ C Sbjct: 74 SLLARARDHLAEVDRALERLERGDYGRCERCREPIPPGRLEVRPAATTCVRCAA 127 >UniRef50_D2R2J7 Transcriptional regulator, TraR/DksA family n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2R2J7_9PLAN Length = 148 Score = 84.7 bits (208), Expect = 7e-16, Method: Composition-based stats. Identities = 22/82 (26%), Positives = 40/82 (48%) Query: 70 PDPVDRAAQEEEFSLELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEAR 129 D +D A + + + + E + + I+ L+++ ++G CE C I + RL+A Sbjct: 41 GDVMDAAMDTAQDEINSQLAEVESRELAHIDTALERMRSGNYGACEGCNEPIPLLRLQAL 100 Query: 130 PTADLCIDCKTLAEIREKQMAG 151 P A +CI C+ AE +G Sbjct: 101 PYAVMCIKCQREAEKNGDVPSG 122 >UniRef50_Q7VGT4 DnaK suppressor protein DskA n=2 Tax=Helicobacter RepID=Q7VGT4_HELHP Length = 118 Score = 84.7 bits (208), Expect = 8e-16, Method: Composition-based stats. Identities = 35/114 (30%), Positives = 58/114 (50%), Gaps = 1/114 (0%) Query: 36 QLAHFRRILEAWRNQLRDEVDRTVTHMQD-EAANFPDPVDRAAQEEEFSLELRNRDRERK 94 F +L ++L D +D T +++ + A+ D D + +LE+ D + Sbjct: 3 DYTFFEILLNERLSKLCDNIDSKNTRIKNIQDAHHKDEGDIVGAGLQGNLEMGMIDLYKD 62 Query: 95 LIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAEIREKQ 148 IK I L+K++D FG CE C EI + RL+ +P A CI+C+ L E +K+ Sbjct: 63 EIKDIRNALQKIKDGTFGVCEMCDDEIDVERLKVKPHAKYCINCRELFEQTQKK 116 >UniRef50_D1C0D4 Transcriptional regulator, TraR/DksA family n=2 Tax=Micrococcineae RepID=D1C0D4_XYLCX Length = 157 Score = 84.3 bits (207), Expect = 1e-15, Method: Composition-based stats. Identities = 30/125 (24%), Positives = 54/125 (43%), Gaps = 5/125 (4%) Query: 26 KPGEEYMNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAANFPD-----PVDRAAQEE 80 + GE+ A++ L A R++L E+ + + N D D + Sbjct: 33 RDGEDPWTLAEIQGLAGDLLADRDRLEAELAAADRELSELLRNSGDGAGDDQADYGSSAL 92 Query: 81 EFSLELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKT 140 E EL + R L+ + + +++++ + CE G+ IG RL+A P A L ++ K Sbjct: 93 EREQELTLVNNMRDLLAQTKHAIERIKAGTYATCEMTGLPIGKARLQAFPRATLSVEAKA 152 Query: 141 LAEIR 145 E R Sbjct: 153 REERR 157 >UniRef50_Q0AYC5 Transcriptional regulators, TraR/DksA family n=1 Tax=Syntrophomonas wolfei subsp. wolfei str. Goettingen RepID=Q0AYC5_SYNWW Length = 147 Score = 83.9 bits (206), Expect = 1e-15, Method: Composition-based stats. Identities = 21/119 (17%), Positives = 48/119 (40%), Gaps = 8/119 (6%) Query: 40 FRRILEAWRNQLRDEVDRTVTHM--------QDEAANFPDPVDRAAQEEEFSLELRNRDR 91 ++ L + ++ + + + + + P D A++ + L + Sbjct: 3 YQDNLMQRKAEIEQVIKQKRDELIIPLGEWSDELSLYDQHPADIASEVTQRETNLGILEM 62 Query: 92 ERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAEIREKQMA 150 ++K+ L ++++ +G CE+CG +I RLE LC +C + K+ A Sbjct: 63 LEYELEKVNDALSRLQNGQYGVCEACGQKIEPARLERLVNTTLCTNCARSQQKGFKRPA 121 >UniRef50_B3ES66 Putative uncharacterized protein n=1 Tax=Candidatus Amoebophilus asiaticus 5a2 RepID=B3ES66_AMOA5 Length = 138 Score = 83.9 bits (206), Expect = 1e-15, Method: Composition-based stats. Identities = 30/123 (24%), Positives = 51/123 (41%) Query: 21 EPYQEKPGEEYMNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAANFPDPVDRAAQEE 80 Y YM++ +A+F++ L L E + + D + V+ + EE Sbjct: 12 PNYDPLQDPTYMSDNMVAYFKQKLNKKLEDLIKEEELIAINKADGPRREAEYVENSQIEE 71 Query: 81 EFSLELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKT 140 E E L +++E L ++ +GYCE G IG+RRL A P A + + Sbjct: 72 LSLEENLPLQNEDFLKREVEDALYRINLGTYGYCEETGDPIGVRRLLAFPMARYTTEVQK 131 Query: 141 LAE 143 + Sbjct: 132 QKD 134 >UniRef50_B2KE71 Transcriptional regulator, TraR/DksA family n=1 Tax=Elusimicrobium minutum Pei191 RepID=B2KE71_ELUMP Length = 258 Score = 83.9 bits (206), Expect = 1e-15, Method: Composition-based stats. Identities = 31/140 (22%), Positives = 57/140 (40%), Gaps = 2/140 (1%) Query: 4 GQNRKTSSLSILAIAGVEPYQEKPGEEYMNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQ 63 +K + I EE + +L ++ L + + +T M+ Sbjct: 119 AAQKKKIEPKVNHILEKAKQASLKAEE-LTAEELKQIKKHLIELHQDATERL-KTKKEME 176 Query: 64 DEAANFPDPVDRAAQEEEFSLELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGI 123 A DP+D A Q + + D I +IE L+K++ +G CE+C + Sbjct: 177 MPEAEVGDPIDTATQSLDKEILFEQTDNSHTQIDQIESALRKIDKGIYGKCENCRQLLPK 236 Query: 124 RRLEARPTADLCIDCKTLAE 143 +R++A P A C+ C++ E Sbjct: 237 KRIKALPFARYCVVCQSSKE 256 >UniRef50_Q2GEN7 DnaK suppressor protein n=2 Tax=Neorickettsia RepID=Q2GEN7_NEOSM Length = 137 Score = 83.9 bits (206), Expect = 1e-15, Method: Composition-based stats. Identities = 33/121 (27%), Positives = 58/121 (47%), Gaps = 11/121 (9%) Query: 27 PGEEYMNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAANFPDPVDRAAQEEEFSLEL 86 EYM E LA+F L RN + ++ + V + + AN + D ++ + Sbjct: 15 KNAEYMGERMLAYFHEKLIGLRNAIVNQ-GKVVKDVLSKCANSYEADDIIMSAQKRN--- 70 Query: 87 RNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAEIRE 146 L+ +I++ L+++E +GYCE G EIG RL+ PTA C+D + + + Sbjct: 71 -------SLLSEIDEALERMEQGVYGYCEETGDEIGFGRLDLEPTARYCVDVQERLDKKN 123 Query: 147 K 147 + Sbjct: 124 R 124 >UniRef50_C3XG00 DnaK suppressor protein n=1 Tax=Helicobacter bilis ATCC 43879 RepID=C3XG00_9HELI Length = 122 Score = 83.9 bits (206), Expect = 2e-15, Method: Composition-based stats. Identities = 36/118 (30%), Positives = 58/118 (49%), Gaps = 1/118 (0%) Query: 32 MNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAA-NFPDPVDRAAQEEEFSLELRNRD 90 M + L R+ LE L +Q+ +A + D + + + + + Sbjct: 1 MRDEDLLSLRQTLEKRLEYLDGLSLNLHKSLQEMSALKLNENADIISTQSQLRFDDSMLE 60 Query: 91 RERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAEIREKQ 148 R +K +K+I +L K +D +G CE C EIGI RL+A+P A CI+C+ + E EKQ Sbjct: 61 RNQKEMKEISASLAKFDDGIYGICEMCEDEIGIERLQAKPHARFCINCREIYEKSEKQ 118 >UniRef50_UPI00019074B1 putative DnaK suppressor protein n=1 Tax=Rhizobium etli GR56 RepID=UPI00019074B1 Length = 128 Score = 83.9 bits (206), Expect = 2e-15, Method: Composition-based stats. Identities = 28/115 (24%), Positives = 45/115 (39%), Gaps = 2/115 (1%) Query: 32 MNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAANFPDPVDRAAQEEEFSLELRNRDR 91 M + L+ + L+ + + A PD DR Q E + + R Sbjct: 14 MRSMKHEDLEDKLKTAKADLQRRMSAIDADLG--TALDPDSEDRVTQLENDQVLMEMRRE 71 Query: 92 ERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAEIRE 146 I+ I+ L++++ FG C +C I RL+A P C C LA+ R Sbjct: 72 AGAQIQLIDAALERLKHGTFGRCVTCLAPIETARLDAIPYTPYCATCARLADERR 126 >UniRef50_B5YGE3 DnaK suppressor protein n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YGE3_THEYD Length = 129 Score = 83.5 bits (205), Expect = 2e-15, Method: Composition-based stats. Identities = 31/119 (26%), Positives = 54/119 (45%), Gaps = 5/119 (4%) Query: 34 EAQLAHFRRILEAWRNQLRDEVDRTVT-----HMQDEAANFPDPVDRAAQEEEFSLELRN 88 + + +++L + Q+ E + + D D + + + L+ Sbjct: 5 QERKNRLKKMLNQMKEQILKEAREEIKKFQTGEKRQIVEAVMDDADLSVIDLSEDISLKQ 64 Query: 89 RDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAEIREK 147 R ++KKIE+ L+K+E+ +G CE CG EI RL+ P A C DC+ E+ EK Sbjct: 65 LSTHRDILKKIEEALRKLEEGTYGICEMCGDEIPEERLKILPFAIYCRDCQEKIEMIEK 123 >UniRef50_Q021L0 Transcriptional regulator, TraR/DksA family n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q021L0_SOLUE Length = 129 Score = 83.5 bits (205), Expect = 2e-15, Method: Composition-based stats. Identities = 27/113 (23%), Positives = 54/113 (47%), Gaps = 3/113 (2%) Query: 32 MNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAANFPDPVDRAAQEEEFSLELRNRDR 91 M+ QL F+RI+E + + + + PD +D+ +L +R + Sbjct: 1 MDNIQLKEFKRIIEEHLASFEHPLGHREDIVVE---STPDTLDQVQNAAARALAIRQLEL 57 Query: 92 ERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAEI 144 + K ++ + L+++ED +G C+ C +I ++RL P A C+ C+ A+ Sbjct: 58 DHKRMRGLRDALERIEDGSYGICQRCDEDISLKRLRVVPWASYCLRCQESADH 110 >UniRef50_Q7UEL7 Probable dnaK (DksA-like) supressor protein n=1 Tax=Rhodopirellula baltica RepID=Q7UEL7_RHOBA Length = 121 Score = 83.5 bits (205), Expect = 2e-15, Method: Composition-based stats. Identities = 27/106 (25%), Positives = 49/106 (46%), Gaps = 1/106 (0%) Query: 42 RILEAWRNQLRDEVDRTVTHMQDEAAN-FPDPVDRAAQEEEFSLELRNRDRERKLIKKIE 100 L+ ++++ V +Q + + D DR + L R + E + + IE Sbjct: 12 NKLQRRAAEIQEMVRTEFAELQHVSDHTVGDAGDRGIESHASELTSRMAESESRELADIE 71 Query: 101 KTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAEIRE 146 + L+++ D FG CE CG I + RL+ P A C+ C+ +E + Sbjct: 72 EALERLRDGTFGDCEDCGKSIPMNRLQVVPHARRCVRCQKASENSQ 117 >UniRef50_A6FXL2 DnaK suppressor protein, putative n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6FXL2_9DELT Length = 132 Score = 83.5 bits (205), Expect = 2e-15, Method: Composition-based stats. Identities = 30/118 (25%), Positives = 54/118 (45%), Gaps = 1/118 (0%) Query: 30 EYMNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDE-AANFPDPVDRAAQEEEFSLELRN 88 ++++E QLA R LE + +L + + + + + D D D+AA+E + Sbjct: 2 DHLSEQQLAGLRTKLETEQAELSERIASSTSVVADNLDPGRGDVEDQAAEEAGRFQAKQL 61 Query: 89 RDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAEIRE 146 R+R + ++E L +V + ++G CE I RRLE PT + + E Sbjct: 62 LTRDRARLAEVEAALSRVAEGEYGICEESDEPIPFRRLELEPTTRYTVAAQEALEAEG 119 >UniRef50_B2V8G8 Transcriptional regulator, TraR/DksA family n=4 Tax=Hydrogenothermaceae RepID=B2V8G8_SULSY Length = 118 Score = 83.5 bits (205), Expect = 2e-15, Method: Composition-based stats. Identities = 46/107 (42%), Positives = 63/107 (58%), Gaps = 2/107 (1%) Query: 30 EYMNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAANFPDPVDRAAQEEEFSLELRNR 89 +++ Q+ + IL WRNQL ++ R + D ++RA E L LRN Sbjct: 2 QHLTPEQIEELKNILLEWRNQLIEDTKRNTGEA--LSFEGADEMERAEAETSRILTLRNL 59 Query: 90 DRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCI 136 DRERKL+K+IE+TL+K+E +G CESCG EI RL+ RP A LCI Sbjct: 60 DRERKLLKRIEQTLQKIEYGVYGICESCGAEIPYERLKVRPIASLCI 106 >UniRef50_A4X6U9 Zinc finger, DksA/TraR C4-type n=4 Tax=Micromonosporaceae RepID=A4X6U9_SALTO Length = 132 Score = 83.1 bits (204), Expect = 2e-15, Method: Composition-based stats. Identities = 30/118 (25%), Positives = 48/118 (40%), Gaps = 6/118 (5%) Query: 34 EAQLAHFRRILEAWRNQLRDEVDRTVTHMQDE------AANFPDPVDRAAQEEEFSLELR 87 +A+ R+ L+A ++L E ++ V Q D D + E Sbjct: 13 QAEADQIRQSLKARYDELAAEYEQAVLQSQVLRLVEVGDTAGDDQADSGTKTAERDTAQS 72 Query: 88 NRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAEIR 145 + E L ++E+ +G+CE CG I + RLE P+A C+ CK E R Sbjct: 73 LLRTILDRRAQFEHALTRLEEGTYGFCEGCGASIPVERLEIFPSATTCVTCKQTRERR 130 >UniRef50_Q2SPR7 DnaK suppressor protein n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SPR7_HAHCH Length = 107 Score = 83.1 bits (204), Expect = 2e-15, Method: Composition-based stats. Identities = 23/108 (21%), Positives = 52/108 (48%), Gaps = 2/108 (1%) Query: 36 QLAHFRRILEAWRNQLRDEVDRTVTHMQDEAANFPDPVDRAAQEEEFSLELRNRDRERKL 95 Q +H + L + L ++ + + + D ++A + E + + Sbjct: 2 QQSHIKNRLSEHLSVLITRLEDITRDLT--SEHSADSAEQAQERENDDVLNALKVETEIE 59 Query: 96 IKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAE 143 I +++K L++++ ++G C +CG +I RL+ P A+LC+ C + +E Sbjct: 60 INQVKKALQRLQQGEYGVCVACGEDIPESRLQVLPFAELCVSCASKSE 107 >UniRef50_Q2NBT1 Putative uncharacterized protein n=1 Tax=Erythrobacter litoralis HTCC2594 RepID=Q2NBT1_ERYLH Length = 104 Score = 83.1 bits (204), Expect = 2e-15, Method: Composition-based stats. Identities = 26/105 (24%), Positives = 43/105 (40%), Gaps = 2/105 (1%) Query: 35 AQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAANFPDPVDRAAQEEEFSLELRNRDRERK 94 ++ FR L+ L + + ++ D ++A + D R Sbjct: 2 SEFDGFRPQLQERLADLLERANVIEDDLRGPL--DADSSEQAVDLADDEALEGVDDVLRA 59 Query: 95 LIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCK 139 I+++ L ++E+ +G C CG I RLEARP A CI C Sbjct: 60 EIQQVRYALARIENGSYGTCAKCGEPIPKERLEARPIATRCIKCA 104 >UniRef50_D1N407 Transcriptional regulator, TraR/DksA family n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1N407_9BACT Length = 133 Score = 83.1 bits (204), Expect = 2e-15, Method: Composition-based stats. Identities = 24/93 (25%), Positives = 41/93 (44%) Query: 56 DRTVTHMQDEAANFPDPVDRAAQEEEFSLELRNRDRERKLIKKIEKTLKKVEDEDFGYCE 115 D D+ D ++ +EL+ E +++ IE +K++ D ++G C+ Sbjct: 38 DALDCSNADKRGVTTHMADVSSDNSRHEMELQLLSEEGDVLRLIEDAIKRLVDGEYGKCQ 97 Query: 116 SCGVEIGIRRLEARPTADLCIDCKTLAEIREKQ 148 CG I RL RP A C+ CK + E + Sbjct: 98 ECGEPISEGRLAIRPYAVYCVKCKEMHEKQGWH 130 >UniRef50_B4D2T0 Transcriptional regulator, TraR/DksA family n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D2T0_9BACT Length = 187 Score = 83.1 bits (204), Expect = 3e-15, Method: Composition-based stats. Identities = 25/115 (21%), Positives = 42/115 (36%), Gaps = 2/115 (1%) Query: 34 EAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAANFPDP--VDRAAQEEEFSLELRNRDR 91 + + + L R+ D V T ++ N D A + Sbjct: 33 DPRWRGYYDALLRERDHCIDLVSGLATTAREANPNPIQDGLADTATDLNQADESRGVLSH 92 Query: 92 ERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAEIRE 146 ++ L+ +I L K+E+ +G CE G I RL+A P A + + E R Sbjct: 93 DQDLLVEINHALSKIEEGTYGVCELTGQPIPAERLKAVPWARFTREAQAEFEARG 147 >UniRef50_A5WFD1 Transcriptional regulator, TraR/DksA family n=3 Tax=Moraxellaceae RepID=A5WFD1_PSYWF Length = 109 Score = 82.8 bits (203), Expect = 3e-15, Method: Composition-based stats. Identities = 20/108 (18%), Positives = 45/108 (41%), Gaps = 1/108 (0%) Query: 34 EAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAANFP-DPVDRAAQEEEFSLELRNRDRE 92 + L + + ++ +D+ H+ + + D+A E + Sbjct: 2 SRDFTKAKERLLELQQEYQNRIDKIEDHIHNPQDDLNSHWDDQAISMRENEMRKTLLVEA 61 Query: 93 RKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKT 140 ++ + + L ++++ +G C CG +I +RLEA P A LC+ + Sbjct: 62 QQSLTYVNNALSRIDNGTYGECTVCGEDIEDKRLEAVPYATLCMQHAS 109 >UniRef50_Q3JAV6 Putative uncharacterized protein n=2 Tax=Nitrosococcus oceani RepID=Q3JAV6_NITOC Length = 132 Score = 82.4 bits (202), Expect = 4e-15, Method: Composition-based stats. Identities = 27/124 (21%), Positives = 57/124 (45%), Gaps = 5/124 (4%) Query: 32 MNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQ-----DEAANFPDPVDRAAQEEEFSLEL 86 +++ Q F++ L+ +++ ++V + + + A D D + + ++L Sbjct: 5 LSDQQRREFKQQLQQRFDEVSEKVRQELRESDNQSYIELAGRVHDREDASLADLLIDIDL 64 Query: 87 RNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAEIRE 146 D + I+ IE+ L + ++G C C +I +RL+ PT C DC+T E Sbjct: 65 AIVDLHIEEIRNIEQALMRFPKGNYGICIDCNTDIDYQRLQINPTVKRCFDCQTRHERTH 124 Query: 147 KQMA 150 ++ A Sbjct: 125 REKA 128 >UniRef50_B9XD69 Transcriptional regulator, TraR/DksA family n=1 Tax=bacterium Ellin514 RepID=B9XD69_9BACT Length = 184 Score = 82.4 bits (202), Expect = 4e-15, Method: Composition-based stats. Identities = 19/112 (16%), Positives = 38/112 (33%), Gaps = 1/112 (0%) Query: 36 QLAHFRRILEAWRNQLRDEVDRTVTHMQDEA-ANFPDPVDRAAQEEEFSLELRNRDRERK 94 + L R ++ D +E + D + L ++ Sbjct: 40 KWKRHYAHLTELREHFLNKKDNLSKDANEETPSYSEHMADAGTDTYDRDFALSMLSADQS 99 Query: 95 LIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAEIRE 146 + +IE+ ++++E +G CE G I RL A P ++ + E Sbjct: 100 AVYEIEQAIQRIESNTYGICEMTGKPIQSERLNAIPWTRFSVEAERELERNG 151 >UniRef50_B5YK78 RNA polymerase-binding protein DksA n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YK78_THEYD Length = 123 Score = 82.4 bits (202), Expect = 5e-15, Method: Composition-based stats. Identities = 47/81 (58%), Positives = 58/81 (71%) Query: 67 ANFPDPVDRAAQEEEFSLELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRL 126 +N + D A+QE + S LR RDRERKL+KKIEKTL+K+ + +G CE+CG EI I RL Sbjct: 39 SNLSEIGDIASQEIDRSFLLRLRDRERKLLKKIEKTLEKINNGTYGICEACGAEIPIERL 98 Query: 127 EARPTADLCIDCKTLAEIREK 147 EARP DLCI+CKT E EK Sbjct: 99 EARPVTDLCIECKTEQEEAEK 119 >UniRef50_C0QW50 DNA-binding transcriptional regulator of transcription, DnaK suppressor protein n=2 Tax=Brachyspira RepID=C0QW50_BRAHW Length = 121 Score = 82.0 bits (201), Expect = 5e-15, Method: Composition-based stats. Identities = 26/104 (25%), Positives = 47/104 (45%) Query: 45 EAWRNQLRDEVDRTVTHMQDEAANFPDPVDRAAQEEEFSLELRNRDRERKLIKKIEKTLK 104 E R L + + T+ + + D VD A Q E + +E+ + + LK Sbjct: 15 EEKRKTLDELLSGNETYEALKDDSHGDMVDIAFQAYEKQNLMNFSQKEKDKLDMLNNALK 74 Query: 105 KVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAEIREKQ 148 ++E+ +G C C EI RL A P C++C + E ++++ Sbjct: 75 RIEEGTYGKCIDCKEEINEERLTALPYTLRCVNCMSKYEDKKRR 118 >UniRef50_D1UB56 Transcriptional regulator, TraR/DksA family n=1 Tax=Desulfovibrio aespoeensis Aspo-2 RepID=D1UB56_9DELT Length = 116 Score = 82.0 bits (201), Expect = 5e-15, Method: Composition-based stats. Identities = 35/116 (30%), Positives = 54/116 (46%), Gaps = 4/116 (3%) Query: 32 MNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAANFPDPVDRAAQEEEFSLELRNRDR 91 M E Q + L + L + N PD D A Q + + L + R Sbjct: 1 MTETQRREIKDHLLNGLSSLTVQ----EAAETFAVENCPDETDFATQLAQQGVNLAMQRR 56 Query: 92 ERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAEIREK 147 IK+ E +K++ + D+G C+ CG IG+ RL+A P+A LCI C++ AE + Sbjct: 57 RMARIKEYECAIKRLRETDYGTCDECGDPIGLARLKANPSARLCIVCQSAAEEEDH 112 >UniRef50_C0R4V6 DnaK suppressor protein, putative n=6 Tax=Wolbachia RepID=C0R4V6_WOLWR Length = 130 Score = 82.0 bits (201), Expect = 6e-15, Method: Composition-based stats. Identities = 34/133 (25%), Positives = 57/133 (42%), Gaps = 13/133 (9%) Query: 14 ILAIAGVEPYQEKPGEEYMNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAANFPDPV 73 + I E Y EEYM+ QL +F L++ +L + + D + D Sbjct: 4 LPKIKSPEDYNPSEDEEYMSVKQLEYFSLKLQSILAELEKQ--ELEDNSIDTYYSDEDSG 61 Query: 74 DRAAQEEEFSLELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTAD 133 R + +KI++ L+K++ +GYC+ G EIG+ RL+A P A Sbjct: 62 -----------NEELIKRRKDRKEKIKEALEKIKLGTYGYCDGTGEEIGVERLKANPLAI 110 Query: 134 LCIDCKTLAEIRE 146 CI+ + E + Sbjct: 111 YCIEEQERVEKEK 123 >UniRef50_C1SL78 DnaK suppressor protein n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SL78_9BACT Length = 144 Score = 81.6 bits (200), Expect = 7e-15, Method: Composition-based stats. Identities = 29/116 (25%), Positives = 51/116 (43%), Gaps = 1/116 (0%) Query: 32 MNEAQLAHFRRILEAWRNQLRDEV-DRTVTHMQDEAANFPDPVDRAAQEEEFSLELRNRD 90 M + ++ + R L R L ++ DR M D D A +L L + Sbjct: 25 MEKEKMIYHRERLLEMRRDLIQKLNDRYNDAMGLGGDGSQDSADEAYNLYNKNLMLGRVE 84 Query: 91 RERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAEIRE 146 + ++ +E+ L++++ +G C C +I +RLE P A C +CKT E + Sbjct: 85 TDALKLRLVEQALQRIDAGSYGVCIECEEDIEEKRLEYVPFARYCTECKTELEKKG 140 >UniRef50_Q5WGI4 General stress protein GSP160 n=1 Tax=Bacillus clausii KSM-K16 RepID=Q5WGI4_BACSK Length = 174 Score = 81.6 bits (200), Expect = 8e-15, Method: Composition-based stats. Identities = 28/119 (23%), Positives = 55/119 (46%), Gaps = 5/119 (4%) Query: 30 EYMNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAAN-----FPDPVDRAAQEEEFSL 84 ++E QLAH + L +++L + RT M D + + A++ E+ + Sbjct: 1 MGLSEKQLAHLKHKLLEMKDELETKKRRTTGEMSDSRGDIARGADNHIGETASEYEDRVI 60 Query: 85 ELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAE 143 + + ++K ++ I + L+++E+ +G C G I RLEA P A + + E Sbjct: 61 QQSLNEADQKRLQDITEALERIEEGTYGICIDTGQPIPYERLEALPYAKRTPEAQREKE 119 >UniRef50_C6I0P9 Transcriptional regulator, TraR/DksA family n=3 Tax=Leptospirillum RepID=C6I0P9_9BACT Length = 136 Score = 81.2 bits (199), Expect = 8e-15, Method: Composition-based stats. Identities = 29/123 (23%), Positives = 57/123 (46%), Gaps = 7/123 (5%) Query: 32 MNEAQLAHFR--RILEAWRNQLRDEVD-----RTVTHMQDEAANFPDPVDRAAQEEEFSL 84 MN+ + + R +L + + ++ + + + D D +A + + Sbjct: 1 MNDKSVRYQRLYNLLSEKKAAIEKDIRTHLVRQIGPDNANRVDSVLDQGDLSAIDMGEGV 60 Query: 85 ELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAEI 144 +L + ++ + +++ L ++E+ +G CE CG EI +RL A P A LCI C+ E Sbjct: 61 DLALLEMRNRMKRSVDQALLRLEEGSYGNCEDCGGEIEEKRLMAMPFAQLCIKCQRKKEE 120 Query: 145 REK 147 EK Sbjct: 121 LEK 123 >UniRef50_UPI00016C3CE0 transcriptional regulators, TraR/DksA family protein n=1 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C3CE0 Length = 253 Score = 81.2 bits (199), Expect = 1e-14, Method: Composition-based stats. Identities = 24/121 (19%), Positives = 43/121 (35%), Gaps = 9/121 (7%) Query: 32 MNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAANFP---------DPVDRAAQEEEF 82 MN + ++R LE +++ ++ D Sbjct: 1 MNSRKTNQYKRQLEKIADRVGRTAAALEEEVRMPLGGESAGGMSNAPLHLGDLGTHAFSQ 60 Query: 83 SLELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLA 142 L+ + E L + L +++D FG C SCG ++G RL+A P C+ C Sbjct: 61 ELDTTLLENETYLRDEAVAALGRIDDGTFGRCTSCGGDVGEERLDALPYVRQCVACAQAE 120 Query: 143 E 143 + Sbjct: 121 Q 121 >UniRef50_D0LUD2 Transcriptional regulator, TraR/DksA family n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LUD2_HALO1 Length = 127 Score = 80.8 bits (198), Expect = 1e-14, Method: Composition-based stats. Identities = 41/117 (35%), Positives = 59/117 (50%), Gaps = 2/117 (1%) Query: 32 MNEAQLAHFRRILEAWRNQLRDEVDRTV--THMQDEAANFPDPVDRAAQEEEFSLELRNR 89 + Q R L R QL D V + + +D D +D + +E +S +LR Sbjct: 2 LTPEQTEELRTRLTTQRRQLVDSVTSAIGFSMDRDRDRVGRDSLDESTEEAMYSTQLRLH 61 Query: 90 DRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAEIRE 146 DRE L+ KI+ L++++ CE CG EI ++RL ARP LCIDCK+ E E Sbjct: 62 DRETFLLNKIDAALERLKAGTIDECEECGGEISVQRLIARPVTTLCIDCKSEREQSE 118 >UniRef50_A6C001 Probable DnaK suppressor protein n=1 Tax=Planctomyces maris DSM 8797 RepID=A6C001_9PLAN Length = 141 Score = 80.8 bits (198), Expect = 1e-14, Method: Composition-based stats. Identities = 28/104 (26%), Positives = 48/104 (46%) Query: 40 FRRILEAWRNQLRDEVDRTVTHMQDEAANFPDPVDRAAQEEEFSLELRNRDRERKLIKKI 99 + L R++L+ V + ++ D D A +E LE + E K + +I Sbjct: 1 MHKQLLNRRDELKKLVSDSSEGSSGSQSSVEDSGDAAIRERRQDLESHLAEIEYKELMQI 60 Query: 100 EKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAE 143 + + +++ +G+CESC I I RL+A P A C+ C E Sbjct: 61 RRAISLIQEGRYGHCESCNKNIPIARLKAVPYAMFCVSCAEQRE 104 >UniRef50_Q1MI46 Putative dnaK suppressor protein n=2 Tax=Rhizobium RepID=Q1MI46_RHIL3 Length = 107 Score = 80.8 bits (198), Expect = 1e-14, Method: Composition-based stats. Identities = 24/101 (23%), Positives = 40/101 (39%), Gaps = 2/101 (1%) Query: 40 FRRILEAWRNQLRDEVDRTVTHMQDEAANFPDPVDRAAQEEEFSLELRNRDRERKLIKKI 99 + +L+ ++ L + + A D +RA Q E + + I I Sbjct: 6 VQTVLQTMKDDLARRLGAIGADLS--VALEKDSEERATQVENDEVLREMQAEGHNQIAAI 63 Query: 100 EKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKT 140 + + ++ D+ +G C C IG RL A P CIDC Sbjct: 64 DAAIGRLNDDTYGKCVKCHNRIGKERLTAVPYTPFCIDCAK 104 >UniRef50_Q8ENZ4 Putative uncharacterized protein OB2328 n=1 Tax=Oceanobacillus iheyensis RepID=Q8ENZ4_OCEIH Length = 116 Score = 80.8 bits (198), Expect = 1e-14, Method: Composition-based stats. Identities = 27/110 (24%), Positives = 50/110 (45%), Gaps = 1/110 (0%) Query: 32 MNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAANFPDPVDRAAQEEEFSLELRNRDR 91 +++ +L +F+ L+ + +L D+ ++ + A P D ++ E + Sbjct: 5 LSKDKLNYFKEKLQQMKEELEDK-RNINSNSDELADYDNHPADMGTEQFEQQRDAGLNLM 63 Query: 92 ERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTL 141 +K+IE L+K+ED +G E G I RLE PTA L + + Sbjct: 64 RENQLKEIEDALQKIEDGTYGISEKSGEPIPEERLEVLPTARLLVSEEEE 113 >UniRef50_A0LSA0 Transcriptional regulators, TraR/DksA family n=1 Tax=Acidothermus cellulolyticus 11B RepID=A0LSA0_ACIC1 Length = 113 Score = 80.5 bits (197), Expect = 1e-14, Method: Composition-based stats. Identities = 24/109 (22%), Positives = 46/109 (42%), Gaps = 1/109 (0%) Query: 36 QLAHFRRILEAWRNQLRDEVDRTVTHM-QDEAANFPDPVDRAAQEEEFSLELRNRDRERK 94 + RR LE +L + + E P D + + + ++ Sbjct: 2 DVQQARRQLEEMLAELDKSLATLSNQRPESEGHGTPGDADAGLDLADHARATALLEVAQE 61 Query: 95 LIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAE 143 +++ + L+++E+ +G C SCG + RLEA+P A C+ C+ E Sbjct: 62 QRRQVLEALQRIENGTYGLCVSCGAPLPEGRLEAKPEAARCLSCQAKLE 110 >UniRef50_Q2BI57 Zn-finger, prokaryotic DksA/TraR C4 type n=1 Tax=Neptuniibacter caesariensis RepID=Q2BI57_9GAMM Length = 123 Score = 80.5 bits (197), Expect = 1e-14, Method: Composition-based stats. Identities = 34/120 (28%), Positives = 60/120 (50%), Gaps = 1/120 (0%) Query: 32 MNEAQLAHFRRILEAWRNQLRDEV-DRTVTHMQDEAANFPDPVDRAAQEEEFSLELRNRD 90 +N +++A F+ L+ QLR E + + + + D + A + + + N Sbjct: 4 LNLSEIAAFKAELKDLLEQLRAEAGEEYSEQTKQQDLHVHDSGEEAEAVVDLMMHVENLA 63 Query: 91 RERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAEIREKQMA 150 R + I LK++++ DFG+C CG EI + RL A PTA CI C+++ E ++ A Sbjct: 64 RHDEEIADCLAALKRIDEGDFGFCLDCGEEIELSRLRACPTASRCIRCQSVLEAEVRKTA 123 >UniRef50_P80872 General stress protein 16O n=2 Tax=Bacillus subtilis group RepID=G16O_BACSU Length = 163 Score = 80.5 bits (197), Expect = 2e-14, Method: Composition-based stats. Identities = 25/118 (21%), Positives = 51/118 (43%), Gaps = 4/118 (3%) Query: 30 EYMNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAA----NFPDPVDRAAQEEEFSLE 85 + + Q H L + +L E T + ++ D + + Sbjct: 1 MALTKEQTQHLYHKLLDMQKELSGEKKETESMTEEVGELSNGVDNHMADHGTLVTDRMTD 60 Query: 86 LRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAE 143 ++ +R+L++++ + L+K++D +G CE G EI RLEA P A + ++ + E Sbjct: 61 QTVKEIDRELLEEVNRALQKMKDGTYGVCEKTGQEIPYERLEAVPYARMTVEAQADVE 118 >UniRef50_C6E710 Transcriptional regulator, TraR/DksA family n=3 Tax=Geobacter RepID=C6E710_GEOSM Length = 130 Score = 80.5 bits (197), Expect = 2e-14, Method: Composition-based stats. Identities = 28/110 (25%), Positives = 49/110 (44%), Gaps = 5/110 (4%) Query: 39 HFRRILEAWRNQLRDEVD-----RTVTHMQDEAANFPDPVDRAAQEEEFSLELRNRDRER 93 FR +L + +L E+ RT + + + D +++ + L D R Sbjct: 11 EFRNLLAEQKRRLWAELREEIFSRTGSDLATQYDIPQDLGEKSILDMLSDAGLAIADIRR 70 Query: 94 KLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAE 143 + +E+ ++VE +G CE+CG I I+RL P A C+ C+ E Sbjct: 71 NQLTALEEAQRRVEQGTYGKCENCGEVIDIQRLRLMPFAAYCVSCQKEKE 120 >UniRef50_C7PES3 Transcriptional regulator, TraR/DksA family n=4 Tax=Bacteroidetes RepID=C7PES3_CHIPD Length = 348 Score = 80.1 bits (196), Expect = 2e-14, Method: Composition-based stats. Identities = 27/126 (21%), Positives = 50/126 (39%), Gaps = 7/126 (5%) Query: 21 EPYQEKPGEEYMNEAQLAHFRRILEAWRNQ-------LRDEVDRTVTHMQDEAANFPDPV 73 +P Q ++ L F+ ++ L+ + R D+ N + Sbjct: 218 QPEQPSGPVYRYSDTDLQEFKDLILKKLEAAKKELVYLQGLITRKDEAGTDDTENKYMSM 277 Query: 74 DRAAQEEEFSLELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTAD 133 + + +E + R+ + I +EK L ++E++ +G C G I RL A P A Sbjct: 278 EDGSGSQEREQLNQMASRQIQFIDHLEKALVRIENKTYGICRVTGKLIDKARLRAVPHAT 337 Query: 134 LCIDCK 139 L I+ K Sbjct: 338 LSIEAK 343 >UniRef50_Q6MHM2 DnaK deletion suppressor protein n=2 Tax=Bdellovibrio bacteriovorus RepID=Q6MHM2_BDEBA Length = 135 Score = 79.7 bits (195), Expect = 2e-14, Method: Composition-based stats. Identities = 29/126 (23%), Positives = 48/126 (38%) Query: 25 EKPGEEYMNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAANFPDPVDRAAQEEEFSL 84 + G ++E + R L + + + V ++ D D+ + Sbjct: 8 TRGGNMAISEKLVTECRAKLLQSKQDILNRVKEARLNLDQNEEKGGDEGDQTVRVLAEQE 67 Query: 85 ELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAEI 144 L +R R + +IE L ++E FGYCE I RL A P L I+ + E Sbjct: 68 FLSMHERMRGQLMEIESALARIEGGTFGYCEETEEAIEPERLRAIPWTRLSIEGAEIRES 127 Query: 145 REKQMA 150 K+ A Sbjct: 128 MNKRYA 133 >UniRef50_B2UIX3 Transcriptional regulator, TraR/DksA family n=6 Tax=Ralstonia RepID=B2UIX3_RALPJ Length = 120 Score = 79.7 bits (195), Expect = 3e-14, Method: Composition-based stats. Identities = 28/114 (24%), Positives = 49/114 (42%), Gaps = 1/114 (0%) Query: 33 NEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAANFP-DPVDRAAQEEEFSLELRNRDR 91 EAQ R +L+ ++R ++ P + D A +E R Sbjct: 5 TEAQWKRLRSLLDEQEARVRRQLSALGPTTVPVPREAPFENADLADEEVGEQTNDVMLVR 64 Query: 92 ERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAEIR 145 R ++++ ++++ +G C CG I RL+A+PTA C+ C+T E R Sbjct: 65 YRSELEQLNAARERMQQHSYGICVDCGEAIPFLRLQAQPTAMRCLPCQTACERR 118 >UniRef50_D0MD16 Transcriptional regulator, TraR/DksA family n=2 Tax=Rhodothermaceae RepID=D0MD16_RHOM4 Length = 149 Score = 79.7 bits (195), Expect = 3e-14, Method: Composition-based stats. Identities = 27/144 (18%), Positives = 62/144 (43%), Gaps = 7/144 (4%) Query: 3 EGQNRKTSSLSILAIAGVEPYQEKPGEEYMNEAQLAHFRRILEAWRNQLRDEVDRTVTHM 62 ++ + + + A + E + +L +FR+++ R Q ++++R + Sbjct: 2 AEKHEQEHNATPNPEASAQEAAEPVRRTPFTDEELEYFRQLILEKRRQAVEDIERMKAQL 61 Query: 63 QD-------EAANFPDPVDRAAQEEEFSLELRNRDRERKLIKKIEKTLKKVEDEDFGYCE 115 +D + A D E R++K I +++ L++++++ +G C+ Sbjct: 62 EDAREQGGTDTAYSFHMADAGTDAMEREKLFLMIARQQKYISHLDRALERIKNKTYGICK 121 Query: 116 SCGVEIGIRRLEARPTADLCIDCK 139 G I RLEA P ++ I+ K Sbjct: 122 VTGKPIPRERLEAVPHTEVSIEAK 145 >UniRef50_C7HYG4 Transcriptional regulator, TraR/DksA family n=1 Tax=Thiomonas intermedia K12 RepID=C7HYG4_THIIN Length = 128 Score = 79.7 bits (195), Expect = 3e-14, Method: Composition-based stats. Identities = 27/125 (21%), Positives = 47/125 (37%), Gaps = 3/125 (2%) Query: 30 EYMNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAANFPDPV---DRAAQEEEFSLEL 86 + R L+ R Q+ ++ + A D A E ++E+ Sbjct: 1 MSLATDLRNTLRDKLQQRRVQMLADLRDESISDEGTLAVRSHRGETDDEAVVESMDAVEI 60 Query: 87 RNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAEIRE 146 + R+ + I+ L++++ DFG C CG +I RL A T C C+ E + Sbjct: 61 ASTARDATELAAIDNALQRLDTPDFGICIDCGADIEPARLLAESTVLRCTACQQRFEHQH 120 Query: 147 KQMAG 151 G Sbjct: 121 HTPGG 125 >UniRef50_D1ACI4 Transcriptional regulator, TraR/DksA family n=2 Tax=Streptosporangineae RepID=D1ACI4_THECD Length = 121 Score = 79.3 bits (194), Expect = 3e-14, Method: Composition-based stats. Identities = 27/117 (23%), Positives = 41/117 (35%), Gaps = 2/117 (1%) Query: 33 NEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAAN--FPDPVDRAAQEEEFSLELRNRD 90 A RR LE L + A P D A + + Sbjct: 5 TAVDTAAARRRLEVMLADLDRSMALLRGERTAVAGARLEAHPADVGAHLSDAEQADAALE 64 Query: 91 RERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAEIREK 147 R R+ + L+++ +G C +CG I RLEARP A C+ C+ + + Sbjct: 65 RLRRQRNSVLAALQRIAAGTYGRCVTCGKPIAAGRLEARPDAARCLTCQARYDRARR 121 >UniRef50_A0AZX7 Transcriptional regulators, TraR/DksA family n=38 Tax=Burkholderia RepID=A0AZX7_BURCH Length = 130 Score = 79.3 bits (194), Expect = 4e-14, Method: Composition-based stats. Identities = 29/121 (23%), Positives = 50/121 (41%), Gaps = 5/121 (4%) Query: 30 EYMNEAQLAHFRRILEAWRNQLRDEVD-----RTVTHMQDEAANFPDPVDRAAQEEEFSL 84 ++ Q ++ L LR E+ R + A PD D A + + Sbjct: 1 MSLDPQQRQTLKQRLNESEQTLRAEIRTSEDQRASESYAELAGAAPDEGDEANADLFVDV 60 Query: 85 ELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAEI 144 + + ++ I + +++ D +G C C +G RL ARPTA+ C C++L E Sbjct: 61 DHALIGMKLTELRAIGRAQQRMRDGSYGECIDCDGSVGYERLLARPTAERCTHCQSLYER 120 Query: 145 R 145 R Sbjct: 121 R 121 >UniRef50_Q12HC6 Transcriptional regulators, TraR/DksA family n=1 Tax=Polaromonas sp. JS666 RepID=Q12HC6_POLSJ Length = 130 Score = 79.3 bits (194), Expect = 4e-14, Method: Composition-based stats. Identities = 33/117 (28%), Positives = 55/117 (47%), Gaps = 4/117 (3%) Query: 32 MNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDE----AANFPDPVDRAAQEEEFSLELR 87 + QL RR L QL+ EV + A + DP + A + LE Sbjct: 4 LRNDQLDLLRRALAERDAQLQVEVRAAKEVAAERPPATARDVQDPGEDAEERYRQGLEHV 63 Query: 88 NRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAEI 144 + R+++ ++ I++ +++ D +G C CG I RL+A+P+A CI C+T E Sbjct: 64 DLQRDQEELRAIQQAQERMADGSYGGCIDCGQPIPFERLKAQPSASRCIACQTRFEQ 120 >UniRef50_A4CBE2 Putative uncharacterized protein n=1 Tax=Pseudoalteromonas tunicata D2 RepID=A4CBE2_9GAMM Length = 103 Score = 78.9 bits (193), Expect = 5e-14, Method: Composition-based stats. Identities = 19/97 (19%), Positives = 41/97 (42%), Gaps = 2/97 (2%) Query: 43 ILEAWRNQLRDEVDRTVTHMQDEAANFPDPVDRAAQEEEFSLELRNRDRERKLIKKIEKT 102 LE + +L + ++ + + D + ++ E + R+ + ++ + + Sbjct: 9 KLEQQQAELINRINAIENDFKQGRS--ADFAEYVSETENDQVLNTIRNEAKSELQLVNQA 66 Query: 103 LKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCK 139 ++ + +G C+ C I RLEA P CIDC Sbjct: 67 IENLHQGHYGVCQQCLKAIAPARLEALPYTQTCIDCA 103 >UniRef50_A4F8B9 Possible suppressor protein DnaK n=6 Tax=Actinomycetales RepID=A4F8B9_SACEN Length = 125 Score = 78.9 bits (193), Expect = 5e-14, Method: Composition-based stats. Identities = 23/123 (18%), Positives = 41/123 (33%), Gaps = 7/123 (5%) Query: 27 PGEEYMNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAA-------NFPDPVDRAAQE 79 + R++L R + H+ + + A Sbjct: 2 SDRKPQARLDAKTARKLLAEERAGATARISSLQRHLSSIREVSTWTGTDDEHDPEGATIA 61 Query: 80 EEFSLELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCK 139 E + R+ ++ +++ +++D +G CE CG I RLEA P CI C Sbjct: 62 YERAQVQGLLADARRDLEALDRAAARLDDGTYGLCERCGSPIAPERLEALPATTTCIACA 121 Query: 140 TLA 142 T Sbjct: 122 THR 124 >UniRef50_D2B0C3 Transcriptional regulator, TraR/DksA family n=1 Tax=Streptosporangium roseum DSM 43021 RepID=D2B0C3_STRRD Length = 110 Score = 78.5 bits (192), Expect = 6e-14, Method: Composition-based stats. Identities = 26/103 (25%), Positives = 45/103 (43%), Gaps = 3/103 (2%) Query: 43 ILEAWRNQLRDEVDRTVTHMQDEAANFPDPVDRAAQEEEFSLELRNRDRERKLIKKIEKT 102 L+ R +L ++ R + D D A + S L + + + + + Sbjct: 11 QLDTIREELEGQLFRWTRQLADLETAVNDD---AVEVSAKSGLLADIVSAERNLAVVRQA 67 Query: 103 LKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAEIR 145 L+ V + +G C+ CG+ I RL+ARP A C+ C+ E R Sbjct: 68 LRDVTELTYGRCDGCGLAIPFERLKARPLARFCMLCQRRHESR 110 >UniRef50_B1KG10 Transcriptional regulator, TraR/DksA family n=1 Tax=Shewanella woodyi ATCC 51908 RepID=B1KG10_SHEWM Length = 115 Score = 78.5 bits (192), Expect = 6e-14, Method: Composition-based stats. Identities = 23/106 (21%), Positives = 49/106 (46%), Gaps = 1/106 (0%) Query: 32 MNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAA-NFPDPVDRAAQEEEFSLELRNRD 90 +++ QLA +++L ++ +D+ + + + D VD A+Q + Sbjct: 9 LSDEQLAFLQKLLNDELRKVNGNIDQLEAQTEATSKCSHLDAVDLASQIAAQRAAHSVLE 68 Query: 91 RERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCI 136 +R+ + +IE+ + +++ +G CE G IG RL P A + Sbjct: 69 SQRQQLSEIERAMARLKVGTYGLCEQTGEPIGFERLAVLPWARHTV 114 >UniRef50_Q2K1F6 Putative DnaK suppressor protein n=1 Tax=Rhizobium etli CFN 42 RepID=Q2K1F6_RHIEC Length = 106 Score = 78.5 bits (192), Expect = 6e-14, Method: Composition-based stats. Identities = 27/105 (25%), Positives = 39/105 (37%), Gaps = 2/105 (1%) Query: 38 AHFRRILEAWRNQLRDEVDRTVTHMQDEAANFPDPVDRAAQEEEFSLELRNRDRERKLIK 97 L+ R L+ V + + DR Q E + + R R+ I Sbjct: 3 EKMENRLKTLRADLQRRVSAIDADLAAALDPDSE--DRVTQLENDQVLMEMRKEAREQII 60 Query: 98 KIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLA 142 I+ L+++ FG C C I RLEA P C+ C LA Sbjct: 61 SIDAALERLNHGSFGRCVRCLDPIDPGRLEAIPYTPYCVTCARLA 105 >UniRef50_C5C3L5 Transcriptional regulator, TraR/DksA family n=1 Tax=Beutenbergia cavernae DSM 12333 RepID=C5C3L5_BEUC1 Length = 111 Score = 78.5 bits (192), Expect = 6e-14, Method: Composition-based stats. Identities = 24/103 (23%), Positives = 38/103 (36%) Query: 36 QLAHFRRILEAWRNQLRDEVDRTVTHMQDEAANFPDPVDRAAQEEEFSLELRNRDRERKL 95 +L R LE LR + A+ + + + + Sbjct: 8 RLTERRAALEERLRALRATRGEIIAASASSNADDEHDPEGSTIAYDRAQVGALIASAEHE 67 Query: 96 IKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDC 138 ++++ L ++ED G CE CG I RLE RP A C+ C Sbjct: 68 REELDAALARIEDGTHGVCERCGRPIPAARLEVRPAARTCVGC 110 >UniRef50_A3X4N5 DnaK suppressor protein n=5 Tax=Rhodobacterales RepID=A3X4N5_9RHOB Length = 104 Score = 78.1 bits (191), Expect = 7e-14, Method: Composition-based stats. Identities = 24/105 (22%), Positives = 46/105 (43%), Gaps = 2/105 (1%) Query: 36 QLAHFRRILEAWRNQLRDEVDRTVTHMQDEAANFPDPVDRAAQEEEFSLELRNRDRERKL 95 A ++ LEA R L + + D DR+++ + + E + Sbjct: 2 DFAARKQALEARRVALAGHLLEVEHALDAPMP--KDWEDRSSERQGDEVLETLGLNELEE 59 Query: 96 IKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKT 140 +++I+ L ++ + +GYC+ CG EI +RL+ P C C + Sbjct: 60 VRQIDAALARLVEGSYGYCQICGDEIAAKRLDLVPATPFCSGCAS 104 >UniRef50_Q48AS1 Putative uncharacterized protein n=1 Tax=Colwellia psychrerythraea 34H RepID=Q48AS1_COLP3 Length = 104 Score = 78.1 bits (191), Expect = 7e-14, Method: Composition-based stats. Identities = 20/98 (20%), Positives = 34/98 (34%), Gaps = 2/98 (2%) Query: 42 RILEAWRNQLRDEVDRTVTHMQDEAANFPDPVDRAAQEEEFSLELRNRDRERKLIKKIEK 101 +LE QL + D ++A + E + + + ++ Sbjct: 8 TLLENKLVQLTKRISAIEADF--HKGRSQDFSEQATETENDGVLDEIHHEAKLELSLVKS 65 Query: 102 TLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCK 139 LK++ + +G C C I RL A P CI C Sbjct: 66 ALKRITEGLYGSCVECEEPINPDRLSALPYTTKCIKCA 103 >UniRef50_Q7MQQ3 Putative uncharacterized protein n=1 Tax=Wolinella succinogenes RepID=Q7MQQ3_WOLSU Length = 113 Score = 78.1 bits (191), Expect = 8e-14, Method: Composition-based stats. Identities = 24/112 (21%), Positives = 49/112 (43%), Gaps = 1/112 (0%) Query: 32 MNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEA-ANFPDPVDRAAQEEEFSLELRNRD 90 M + Q + + + A +R+++ + + + +D + +++ R Sbjct: 1 MTKKQRSELKLKIIAEIESVRNDIQHLKEENNPISLMSVSEKMDALESLADQNIQKRLLL 60 Query: 91 RERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLA 142 +KK+E L +++ DFG C+ C I +RL A P A +C+DC Sbjct: 61 DLEARLKKLEYALTRIDSPDFGICQICDEPIPYKRLFALPEATICVDCANER 112 >UniRef50_D0JAK5 DnaK suppressor protein n=13 Tax=Bacteroidetes RepID=D0JAK5_BLASB Length = 131 Score = 78.1 bits (191), Expect = 8e-14, Method: Composition-based stats. Identities = 26/130 (20%), Positives = 51/130 (39%), Gaps = 7/130 (5%) Query: 25 EKPGEEYMNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAANFPDPV-------DRAA 77 E+ G++ + + FR+++ + + ++ + N D + + Sbjct: 2 EEKGKQRYSMEERKEFRKLILEKLEKAKKDLSILKDSFSNNQDNGTDDTYPTFKAFEEGS 61 Query: 78 QEEEFSLELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCID 137 + + + +K I + L +VE++D+G C I RL A P L I+ Sbjct: 62 ETLSKEQNAQILEHLQKFINSLNAALIRVENKDYGICRITKKLIPKGRLMAVPHTTLSIE 121 Query: 138 CKTLAEIREK 147 K L E R K Sbjct: 122 GKKLVEKRNK 131 >UniRef50_Q12E87 Transcriptional regulators, TraR/DksA family n=1 Tax=Polaromonas sp. JS666 RepID=Q12E87_POLSJ Length = 134 Score = 77.4 bits (189), Expect = 1e-13, Method: Composition-based stats. Identities = 26/125 (20%), Positives = 52/125 (41%), Gaps = 10/125 (8%) Query: 33 NEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAANFPDPV----DRAAQEEEFSLELRN 88 + +Q FR +L +LR + + + A + V D A ++ ++ Sbjct: 5 DSSQAPRFRLLLTQREAELRAVLRAAGSLSDEAAESESHDVTDFKDVATEQSLATVADAK 64 Query: 89 RDRERKLIKKIEKTLKKVEDED------FGYCESCGVEIGIRRLEARPTADLCIDCKTLA 142 D ++++ L++++D +G+C CG I +RRL A P C C+ + Sbjct: 65 VDHAAHELEQVLAALRRLDDATNGKSPGYGHCLDCGEAIDLRRLAALPATPYCTACQAIH 124 Query: 143 EIREK 147 E + Sbjct: 125 EHERQ 129 >UniRef50_C3KFN9 Putative uncharacterized protein n=8 Tax=Bacteria RepID=C3KFN9_PSEFL Length = 119 Score = 77.4 bits (189), Expect = 1e-13, Method: Composition-based stats. Identities = 28/117 (23%), Positives = 54/117 (46%), Gaps = 3/117 (2%) Query: 30 EYMNEAQ-LAHFRRILEAWRNQLRDEVDRTVTHMQ--DEAANFPDPVDRAAQEEEFSLEL 86 M++A LAHF+ +LE +L ++ + Q + + + R ++ ++ Sbjct: 1 MAMDDALNLAHFKTLLEQRAAELDRLLEDAESRSQSVELDQSKVGRLSRMDALQQQAMND 60 Query: 87 RNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAE 143 R R + ++++ LK+ ++G+C CG I + RL P LCI C + E Sbjct: 61 AIRGRAQHERVRLQQALKRWHKGEYGWCNQCGALIALGRLVFDPATPLCITCASRVE 117 >UniRef50_Q11YT2 Possible DNAK suppressor protein n=6 Tax=Bacteroidetes RepID=Q11YT2_CYTH3 Length = 259 Score = 77.4 bits (189), Expect = 1e-13, Method: Composition-based stats. Identities = 22/126 (17%), Positives = 43/126 (34%), Gaps = 7/126 (5%) Query: 24 QEKPGEEYMNEAQLAHFRRILEAWRNQLRDE-------VDRTVTHMQDEAANFPDPVDRA 76 K + ++ +L F I+ R + ++R D ++ Sbjct: 133 APKDDRTHYSKEELKEFEAIIVEKLETARKQFQFAKEVLNRKNDEGTDNTTGNIKMLEDG 192 Query: 77 AQEEEFSLELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCI 136 A E R++K I ++E ++++ +G C G I RL+ P I Sbjct: 193 ADVLEKESFSAFAARQQKFILQLENAYARIQNGTYGICIVTGKLIPKERLKLVPHTQHTI 252 Query: 137 DCKTLA 142 + K Sbjct: 253 EAKEQR 258 >UniRef50_C5CLF2 Transcriptional regulator, TraR/DksA family n=1 Tax=Variovorax paradoxus S110 RepID=C5CLF2_VARPS Length = 130 Score = 77.0 bits (188), Expect = 2e-13, Method: Composition-based stats. Identities = 30/120 (25%), Positives = 53/120 (44%), Gaps = 5/120 (4%) Query: 32 MNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAAN-----FPDPVDRAAQEEEFSLEL 86 M+ + A + R L+ +L E+ + PD VD A + +L Sbjct: 1 MDNTEKAQWNRKLDERAAELESELRAAKADEDEAPTRTPHVQVPDTVDAAEERLRGALRG 60 Query: 87 RNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAEIRE 146 +R+ ++ IE +++ +FG C CGV+I + RLEA P + C++C+ E Sbjct: 61 AEVERDVSELRDIEAARERLRTGEFGTCIDCGVQIPLDRLEAMPASARCLECQQRHERTH 120 >UniRef50_B7S312 Putative uncharacterized protein n=1 Tax=marine gamma proteobacterium HTCC2148 RepID=B7S312_9GAMM Length = 107 Score = 77.0 bits (188), Expect = 2e-13, Method: Composition-based stats. Identities = 25/108 (23%), Positives = 45/108 (41%), Gaps = 2/108 (1%) Query: 32 MNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAANFPDPVDRAAQEEEFSLELRNRDR 91 M + R LE R ++ + + + D ++A + E + + Sbjct: 1 MIPMAIEELRAELEQRRVSMQTRLSSIKKDVTQ--EHSGDSAEQAQERENDEVIDAIGNE 58 Query: 92 ERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCK 139 R+ + I+ L K+ D +G CE CG I RL+A P ++ C+ C Sbjct: 59 TRQSLHAIQVALDKIADGTYGDCEKCGANIEAGRLQAIPESNCCMSCA 106 >UniRef50_A3JJC9 Putative uncharacterized protein n=1 Tax=Marinobacter sp. ELB17 RepID=A3JJC9_9ALTE Length = 111 Score = 77.0 bits (188), Expect = 2e-13, Method: Composition-based stats. Identities = 29/111 (26%), Positives = 48/111 (43%), Gaps = 2/111 (1%) Query: 32 MNEAQLAHFRRILEAWRNQLR--DEVDRTVTHMQDEAANFPDPVDRAAQEEEFSLELRNR 89 M L FR +L A R+ L EV + + R + +L + Sbjct: 1 MATENLEKFRILLLAQRDDLLPTSEVRDESSATVHLDQQSVGRLSRMDALQSQALAQAGK 60 Query: 90 DRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKT 140 R + ++ IE L +++++++G C CG I +RLE PT+ CI C Sbjct: 61 VRADRQLRLIEAALLRIDNDEYGDCRECGEPINPKRLEVDPTSLYCIHCAR 111 >UniRef50_Q3J1J5 DnaK suppressor protein n=5 Tax=Rhodobacter RepID=Q3J1J5_RHOS4 Length = 105 Score = 77.0 bits (188), Expect = 2e-13, Method: Composition-based stats. Identities = 23/104 (22%), Positives = 44/104 (42%), Gaps = 2/104 (1%) Query: 36 QLAHFRRILEAWRNQLRDEVDRTVTHMQDEAANFPDPVDRAAQEEEFSLELRNRDRERKL 95 + + LEA L ++ + ++ N D + A + E + ++ Sbjct: 3 DIPRRKAQLEARLADLGARLEGIEAEL--DSHNSRDWEELATERETEEVLESMGTSGQQE 60 Query: 96 IKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCK 139 I+ I L +++ +++G+C CG EIG RL+ P C C Sbjct: 61 IRAITAALARIDADEYGFCVKCGAEIGEARLDVLPYTPFCRKCA 104 >UniRef50_B8GPY8 Transcriptional regulator, TraR/DksA family n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GPY8_THISH Length = 114 Score = 76.6 bits (187), Expect = 2e-13, Method: Composition-based stats. Identities = 30/107 (28%), Positives = 53/107 (49%), Gaps = 1/107 (0%) Query: 38 AHFRRILEAWRNQLRDEVDRTVTHMQDEAAN-FPDPVDRAAQEEEFSLELRNRDRERKLI 96 RR LE R+ L+ +DR +++ EA D ++A Q E + + R+ + Sbjct: 6 EDLRRQLEQLRDDLQSRLDRVERNVRHEAEPLDKDFAEQAVQRENEEVVDALGNEARREL 65 Query: 97 KKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAE 143 ++ + LK++ + ++G C +CG I RL+ P A LC C + E Sbjct: 66 ARVHEALKRMNEGEYGICAACGEAIPEARLKILPQARLCAACASRQE 112 >UniRef50_Q473A0 Zn-finger, prokaryotic DksA/TraR C4 type n=3 Tax=Cupriavidus RepID=Q473A0_RALEJ Length = 124 Score = 76.6 bits (187), Expect = 2e-13, Method: Composition-based stats. Identities = 28/114 (24%), Positives = 45/114 (39%), Gaps = 1/114 (0%) Query: 32 MNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAANFP-DPVDRAAQEEEFSLELRNRD 90 + +LA L+A ++RD V + + D D A +E + Sbjct: 4 LTTQELAALAVQLDASEARIRDAVGTAASPLAGPMQREARDDADLAEEEVVQRQADAMLE 63 Query: 91 RERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAEI 144 R + I ++++ +G C CG I RL+A PTA C DC+ E Sbjct: 64 HYRTELADIRAARERMKAGQYGTCTDCGEAIPYSRLQAYPTARRCADCQRGHER 117 >UniRef50_C7R8Q8 Transcriptional regulator, TraR/DksA family n=1 Tax=Kangiella koreensis DSM 16069 RepID=C7R8Q8_KANKD Length = 120 Score = 76.6 bits (187), Expect = 2e-13, Method: Composition-based stats. Identities = 27/118 (22%), Positives = 57/118 (48%), Gaps = 2/118 (1%) Query: 33 NEAQLAHFRRILEAWRNQLRDEVDRTVT--HMQDEAANFPDPVDRAAQEEEFSLELRNRD 90 N+ + AH+R L + +L + + + V R + ++ + + Sbjct: 3 NDKKTAHYREELLLIQKELVEALGLAEEVGEKVELDQARFGRVSRGTALMDQAMSEASVE 62 Query: 91 RERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAEIREKQ 148 R++K + + K LK++E+ +G+C C I +RLE P +LC+DC++ E +++ Sbjct: 63 RDKKRLVAVRKALKRIEEGQYGFCLECDEPISAKRLEVAPETELCLDCQSFKEEHDRK 120 >UniRef50_Q1LEV8 Transcriptional regulators, TraR/DksA family n=1 Tax=Cupriavidus metallidurans CH34 RepID=Q1LEV8_RALME Length = 123 Score = 76.6 bits (187), Expect = 3e-13, Method: Composition-based stats. Identities = 28/123 (22%), Positives = 44/123 (35%), Gaps = 3/123 (2%) Query: 30 EYMNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAANFP-DPVDRAAQEEEFSLELRN 88 + AQ A +L+ + R + T P D D A +E Sbjct: 2 NALTSAQFATLAAMLDVEEARARAALGTGATPRAPLERQDPGDKTDVADREIGQRQADAM 61 Query: 89 RDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAEIREKQ 148 R+ R ++ I ++ + C C I RL+A PTA C C+ E +K+ Sbjct: 62 REHYRVELEDIAAARGRMTLGSYAICRECEEPIPFERLQAYPTAKRCTACQR--EHEQKR 119 Query: 149 MAG 151 G Sbjct: 120 GGG 122 >UniRef50_B9KZU6 Putative uncharacterized protein n=1 Tax=Thermomicrobium roseum DSM 5159 RepID=B9KZU6_THERP Length = 133 Score = 76.2 bits (186), Expect = 3e-13, Method: Composition-based stats. Identities = 19/99 (19%), Positives = 34/99 (34%) Query: 47 WRNQLRDEVDRTVTHMQDEAANFPDPVDRAAQEEEFSLELRNRDRERKLIKKIEKTLKKV 106 R QL + +E D A+ + + + ++ L+++ Sbjct: 27 QRRQLLRMLADEGQSQAEEGTVATHLADAASDMVMAEYDQTMLRTLEEELHEVLAALERI 86 Query: 107 EDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAEIR 145 + +G C C I RLEA P A C+ + E Sbjct: 87 DQGTYGICVDCKRPIERERLEAVPWAVRCVADQERFERE 125 >UniRef50_A6QA93 Putative uncharacterized protein n=1 Tax=Sulfurovum sp. NBC37-1 RepID=A6QA93_SULNB Length = 116 Score = 76.2 bits (186), Expect = 3e-13, Method: Composition-based stats. Identities = 26/106 (24%), Positives = 48/106 (45%), Gaps = 2/106 (1%) Query: 33 NEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAANF--PDPVDRAAQEEEFSLELRNRD 90 N+ L F IL+ QL + + + + + ++ D D A+ + S + Sbjct: 5 NDLDLDRFENILKEREAQLEENIAQLKSELDIVGSDDGINDVEDLASLKNISSKDNTLLK 64 Query: 91 RERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCI 136 R+ +K+ + L K+++ +G CE G I + RLEA P A + Sbjct: 65 RQEDELKETQHALTKIKNGTYGICEKTGKSIPVERLEANPIARYVV 110 >UniRef50_B7RRT7 DnaK suppressor protein n=1 Tax=Roseobacter sp. GAI101 RepID=B7RRT7_9RHOB Length = 107 Score = 75.8 bits (185), Expect = 3e-13, Method: Composition-based stats. Identities = 24/105 (22%), Positives = 44/105 (41%), Gaps = 2/105 (1%) Query: 36 QLAHFRRILEAWRNQLRDEVDRTVTHMQDEAANFPDPVDRAAQEEEFSLELRNRDRERKL 95 L HF ++ A +L + V + + D D++ E+ + +K Sbjct: 3 DLTHFGNLITARLQELDERVHELDHELGEPKTADLD--DQSIDLEDDEVLESLGLAAQKE 60 Query: 96 IKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKT 140 I + + + ++E+ +G C+ CG +I RLEA LC C Sbjct: 61 IMLLNRAITRIENGSYGICKKCGDQISKERLEAVLYTQLCKRCAA 105 >UniRef50_B7S3A6 Putative uncharacterized protein n=1 Tax=marine gamma proteobacterium HTCC2148 RepID=B7S3A6_9GAMM Length = 112 Score = 75.8 bits (185), Expect = 4e-13, Method: Composition-based stats. Identities = 31/110 (28%), Positives = 53/110 (48%), Gaps = 4/110 (3%) Query: 32 MNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAANFPDPVDRAAQE---EEFSLELRN 88 M QL FR+ L A ++ D++++ D A V R ++ + + Sbjct: 1 MKAHQLDVFRKALTARAQEI-DQLNKDSKDAADTVALDQSKVGRLSRMDAMQAQQMAQET 59 Query: 89 RDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDC 138 R ++ ++KI+ L ++ED ++GYC +CG I I RL P + CI C Sbjct: 60 ARRRQQQLQKIKSALYRLEDGNYGYCFTCGDAIDIGRLNFDPASTRCIGC 109 >UniRef50_A6Q8R9 DnaK suppressor protein DksA n=1 Tax=Sulfurovum sp. NBC37-1 RepID=A6Q8R9_SULNB Length = 114 Score = 75.8 bits (185), Expect = 4e-13, Method: Composition-based stats. Identities = 23/112 (20%), Positives = 49/112 (43%), Gaps = 1/112 (0%) Query: 32 MNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQD-EAANFPDPVDRAAQEEEFSLELRNRD 90 M Q F++I+E L E++ + + D V + ++E S+ + + Sbjct: 1 MTTEQKQQFKQIIEEQIQTLSSEIEEIRAAIYPTKGEGTSDKVAHISFKQEQSIHFQRYE 60 Query: 91 RERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLA 142 K + +++ K++ ++G C+ C +I I RL+ P + C+ C Sbjct: 61 EATKRMNRLKHAYLKIDTPEYGICKECEEDIPIERLKLVPESLYCVACMNEL 112 >UniRef50_B8DLC7 Transcriptional regulator, TraR/DksA family n=1 Tax=Desulfovibrio vulgaris str. 'Miyazaki F' RepID=B8DLC7_DESVM Length = 119 Score = 75.4 bits (184), Expect = 6e-13, Method: Composition-based stats. Identities = 38/117 (32%), Positives = 56/117 (47%), Gaps = 4/117 (3%) Query: 32 MNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAANFPDPVDRAAQEEEFSLELRNRDR 91 M E +A RR L+ LR+ +DR E A+ P+ + S + R Sbjct: 1 MREETIAVVRRRLKQEIRDLREALDRWRGLQGVEDASDPERMPDVEGMTYRSW----KQR 56 Query: 92 ERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAEIREKQ 148 ++ + TL++++DEDFGYC+ CG EI RL A PT C+ C + E R Q Sbjct: 57 TETRLQVLRATLERLDDEDFGYCDDCGNEIPAARLLAVPTTTRCVHCMSAREERGAQ 113 >UniRef50_B8GMT5 Transcriptional regulator, TraR/DksA family n=2 Tax=Gammaproteobacteria RepID=B8GMT5_THISH Length = 132 Score = 75.1 bits (183), Expect = 6e-13, Method: Composition-based stats. Identities = 26/118 (22%), Positives = 50/118 (42%), Gaps = 5/118 (4%) Query: 32 MNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQ-----DEAANFPDPVDRAAQEEEFSLEL 86 +++ Q+ L+ L +E + + A D +++ + L+L Sbjct: 5 LSDTQIRELEARLKDRLTTLVEETRQILLASDKEPYIRLAGEVHDIGEQSVADLLVDLDL 64 Query: 87 RNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAEI 144 + DR + ++ +E L ++ + +G C CG I RL+A PTA C C+ E Sbjct: 65 ADVDRHVEEVRDVEAALLRIAGQSYGICTDCGDAIAYERLDAYPTAKRCARCQAQHEK 122 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.310 0.138 0.387 Lambda K H 0.267 0.0421 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 873,692,284 Number of Sequences: 3077464 Number of extensions: 35128310 Number of successful extensions: 234304 Number of sequences better than 1.0e-01: 250 Number of HSP's better than 0.1 without gapping: 1180 Number of HSP's successfully gapped in prelim test: 444 Number of HSP's that attempted gapping in prelim test: 230631 Number of HSP's gapped (non-prelim): 3600 length of query: 151 length of database: 1,040,396,356 effective HSP length: 114 effective length of query: 37 effective length of database: 689,565,460 effective search space: 25513922020 effective search space used: 25513922020 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.2 bits) S2: 87 (38.1 bits)