BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (319 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_A7ZTR6 HTH-type transcriptional regulator yidZ n=122 Ta... 316 4e-85 UniRef50_B9Z480 Transcriptional regulator, LysR family n=1 Tax=L... 316 9e-85 UniRef50_A6T413 Transcriptional regulator, LysR family n=1 Tax=J... 313 5e-84 UniRef50_A9G5G2 Nodulation protein D n=2 Tax=Proteobacteria RepI... 311 3e-83 UniRef50_C3KKF8 Putative transcriptional regulatory protein, Lys... 308 2e-82 UniRef50_Q2S713 Transcriptional regulator n=1 Tax=Hahella chejue... 304 3e-81 UniRef50_B0C5B7 Transcriptional regulator, LysR-family n=1 Tax=A... 303 4e-81 UniRef50_Q3KA14 LysR family regulatory protein n=24 Tax=Bacteria... 302 1e-80 UniRef50_Q5P743 Transcriptional regulator, LysR family n=2 Tax=B... 301 2e-80 UniRef50_B1KAV0 Transcriptional regulator, LysR family n=5 Tax=B... 301 2e-80 UniRef50_C6XIT5 Transcriptional regulator, LysR family n=1 Tax=H... 300 3e-80 UniRef50_A1W256 Transcriptional regulator, LysR family n=2 Tax=C... 300 6e-80 UniRef50_P10183 HTH-type transcriptional activator nahR n=67 Tax... 297 4e-79 UniRef50_Q2S7V2 Transcriptional regulator n=1 Tax=Hahella chejue... 295 1e-78 UniRef50_Q12H69 Transcriptional regulator, LysR family n=14 Tax=... 295 1e-78 UniRef50_A9GLW1 Transcriptional regulator, LysR family n=1 Tax=S... 294 2e-78 UniRef50_Q473Q1 Transcriptional regulator, LysR family n=9 Tax=B... 294 3e-78 UniRef50_C6ARG9 Transcriptional regulator, LysR family n=7 Tax=P... 293 6e-78 UniRef50_Q15UP0 Transcriptional regulator, LysR family n=4 Tax=A... 293 8e-78 UniRef50_A0LD88 Transcriptional regulator, LysR family n=1 Tax=M... 292 9e-78 UniRef50_B4X4B4 LysR substrate binding domain protein n=1 Tax=Al... 292 1e-77 UniRef50_A8GKS5 Transcriptional regulator, LysR family n=1 Tax=S... 292 1e-77 UniRef50_Q12M05 Transcriptional regulator n=3 Tax=Gammaproteobac... 291 2e-77 UniRef50_A1U1I0 Transcriptional regulator, LysR family n=67 Tax=... 289 9e-77 UniRef50_A3QJ07 Transcriptional regulator, LysR family n=25 Tax=... 289 9e-77 UniRef50_A0LD87 Transcriptional regulator, LysR family n=1 Tax=M... 289 1e-76 UniRef50_A9FW21 Transcriptional regulator, LysR family n=2 Tax=M... 288 2e-76 UniRef50_A6VUW1 Transcriptional regulator, LysR family n=2 Tax=M... 287 3e-76 UniRef50_A9AQZ4 Transcriptional regulator, LysR family n=24 Tax=... 286 5e-76 UniRef50_A5F4D9 Transcriptional regulator, LysR family n=68 Tax=... 286 9e-76 UniRef50_Q0BPL7 Transcriptional regulators, LysR family n=1 Tax=... 286 9e-76 UniRef50_A5V8P8 Transcriptional regulator, LysR family n=1 Tax=S... 286 1e-75 UniRef50_A9FB16 Transcriptional regulator, LysR family n=3 Tax=S... 286 1e-75 UniRef50_B6R1K2 Transcriptional regulator, LysR family n=1 Tax=P... 285 1e-75 UniRef50_Q30XG7 Conserved hypothetical transcriptional regulator... 285 1e-75 UniRef50_A4YPA1 Putative transcriptional regulator, LysR family ... 285 1e-75 UniRef50_Q7W2A6 Transcriptional regulator n=3 Tax=Bordetella Rep... 285 2e-75 UniRef50_B0BQD1 HTH-type transcriptional activator n=15 Tax=Prot... 284 2e-75 UniRef50_Q13YH7 Transcriptional regulator, LysR family n=12 Tax=... 284 2e-75 UniRef50_A1WRT3 Transcriptional regulator, LysR family n=1 Tax=V... 284 2e-75 UniRef50_Q2IYM8 Transcriptional regulator, LysR family n=2 Tax=R... 284 3e-75 UniRef50_B2JSH4 Transcriptional regulator, LysR family n=2 Tax=B... 284 3e-75 UniRef50_D0LKM3 Transcriptional regulator, LysR family n=1 Tax=H... 284 3e-75 UniRef50_Q08NF6 Transcriptional Regulator, LysR family n=1 Tax=S... 284 4e-75 UniRef50_A3Y808 Transcriptional regulator, LysR family protien n... 283 4e-75 UniRef50_B7WQP0 Transcriptional regulator, LysR family n=1 Tax=C... 283 5e-75 UniRef50_C9NXV6 Transcriptional regulator LysR family n=1 Tax=Vi... 283 5e-75 UniRef50_Q8YZV2 Transcriptional regulator n=2 Tax=Nostocaceae Re... 283 6e-75 UniRef50_Q13QG3 Transcriptional regulator, LysR family n=9 Tax=P... 283 6e-75 UniRef50_A6EYC4 LysR family regulatory protein n=1 Tax=Marinobac... 283 8e-75 UniRef50_Q1XGL2 Transcriptional activator NahR n=3 Tax=root RepI... 282 1e-74 UniRef50_C4UEX0 Lys-R type regulatory protein n=1 Tax=Yersinia r... 282 1e-74 UniRef50_Q1GMN1 Transcriptional regulator, LysR family n=1 Tax=R... 281 2e-74 UniRef50_B0C7Y6 Transcriptional regulator, LysR family n=1 Tax=A... 281 2e-74 UniRef50_Q2G901 Transcriptional regulator, LysR family n=2 Tax=A... 281 3e-74 UniRef50_Q89IY7 Transcriptional regulatory protein n=1 Tax=Brady... 281 3e-74 UniRef50_A9CLK9 Transcriptional regulator, LysR family n=2 Tax=A... 280 5e-74 UniRef50_A0KKG7 HTH-type transcriptional regulator YidZ n=3 Tax=... 279 6e-74 UniRef50_Q39AY8 Transcriptional regulator, LysR family n=1 Tax=B... 279 6e-74 UniRef50_Q393U0 Transcriptional regulator, LysR family n=6 Tax=B... 278 1e-73 UniRef50_A8GG55 Transcriptional regulator, LysR family n=1 Tax=S... 278 2e-73 UniRef50_A6FYP7 Transcriptional regulator, LysR family protein n... 278 2e-73 UniRef50_A5W6Q9 Transcriptional regulator, LysR family n=12 Tax=... 278 2e-73 UniRef50_Q46YJ7 Transcriptional regulator, LysR family n=5 Tax=c... 278 3e-73 UniRef50_Q3JR86 LysR-family regultor n=70 Tax=Proteobacteria Rep... 277 3e-73 UniRef50_Q88I06 Nodulation protein d1 n=4 Tax=Gammaproteobacteri... 277 4e-73 UniRef50_C4KB22 Transcriptional regulator, LysR family n=37 Tax=... 277 5e-73 UniRef50_A8V9B9 LysR-like regulatory protein n=2 Tax=Betaproteob... 276 5e-73 UniRef50_C5AL93 Transcriptional regulator, LysR family protein n... 276 8e-73 UniRef50_B8KV86 Putative transcriptional regulator, LysR family ... 276 1e-72 UniRef50_D1TCI7 LysR family transcriptional regulator n=2 Tax=Bu... 275 1e-72 UniRef50_Q0VLU8 Transcriptional regulator, LysR family n=2 Tax=A... 275 1e-72 UniRef50_A4SSQ1 Transcriptional regulator, LysR family n=2 Tax=A... 275 1e-72 UniRef50_C6DDI5 Transcriptional regulator, LysR family n=4 Tax=E... 275 1e-72 UniRef50_Q391Q9 Transcriptional regulator, LysR family n=1 Tax=B... 275 2e-72 UniRef50_A9GGP1 LysR-family transcriptional regulator n=1 Tax=So... 275 2e-72 UniRef50_Q2BJ61 Transcriptional regulator, LysR family protein n... 275 2e-72 UniRef50_A6VSJ2 Transcriptional regulator, LysR family n=28 Tax=... 274 2e-72 UniRef50_B9Z7Z3 Transcriptional regulator, LysR family n=3 Tax=P... 274 2e-72 UniRef50_Q4KHX1 Transcriptional regulator, LysR family n=1 Tax=P... 274 2e-72 UniRef50_B7CP85 Transcriptional regulator, LysR family protein n... 274 2e-72 UniRef50_C7RKX8 Transcriptional regulator, LysR family n=20 Tax=... 274 3e-72 UniRef50_A4XX96 Transcriptional regulator, LysR family n=3 Tax=P... 274 3e-72 UniRef50_Q0ARX0 Transcriptional regulator, LysR family n=1 Tax=M... 274 3e-72 UniRef50_A6EW06 Transcriptional regulator n=2 Tax=Marinobacter R... 274 3e-72 UniRef50_A9AQX4 Transcriptional regulator, LysR family n=20 Tax=... 274 3e-72 UniRef50_B6JAE3 MexT protein n=1 Tax=Oligotropha carboxidovorans... 274 4e-72 UniRef50_Q46T42 Regulatory protein, LysR:LysR, substrate-binding... 273 5e-72 UniRef50_C5CVL6 Transcriptional regulator, LysR family n=5 Tax=c... 273 6e-72 UniRef50_B7V4S2 Probable transcriptional regulator n=7 Tax=Pseud... 273 7e-72 UniRef50_B7VQ45 Transcriptional regulator n=8 Tax=Vibrionales Re... 273 7e-72 UniRef50_D1RUJ7 Transcriptional regulatory protein n=1 Tax=Serra... 273 8e-72 UniRef50_B1J7P4 Transcriptional regulator, LysR family n=5 Tax=P... 273 8e-72 UniRef50_Q5LKP3 Transcriptional regulator, LysR family n=1 Tax=R... 272 9e-72 UniRef50_Q210Z5 Transcriptional regulator, LysR family n=2 Tax=A... 272 1e-71 UniRef50_Q1MWN1 LysR-type regulatory protein n=1 Tax=Sphingomona... 272 1e-71 UniRef50_A3VAM0 Nodulation protein d1 n=1 Tax=Rhodobacterales ba... 272 1e-71 UniRef50_Q13GK2 Transcriptional regulator, LysR family n=1 Tax=B... 272 2e-71 UniRef50_Q13JD9 Transcriptional regulator, LysR family n=1 Tax=B... 272 2e-71 UniRef50_A1U2R6 Transcriptional regulator, LysR family n=3 Tax=M... 271 2e-71 UniRef50_B7RYN1 Transcriptional regulator, LysR family protein n... 271 2e-71 UniRef50_C9PC13 Transcriptional regulator LysR family n=1 Tax=Vi... 271 2e-71 UniRef50_Q1N663 Regulatory protein, LysR:LysR, substrate-binding... 271 3e-71 UniRef50_A1VMI6 Transcriptional regulator, LysR family n=28 Tax=... 271 3e-71 UniRef50_A1U8Q8 Transcriptional regulator, LysR family n=1 Tax=M... 270 4e-71 UniRef50_A3YHF6 Transcriptional regulatory protein n=2 Tax=Gamma... 270 4e-71 UniRef50_Q15XJ4 Transcriptional regulator, LysR family n=1 Tax=P... 270 5e-71 UniRef50_A9FJR3 Transcriptional regulator, LysR family n=2 Tax=S... 269 7e-71 UniRef50_A9C385 Transcriptional regulator, LysR family n=2 Tax=c... 269 7e-71 UniRef50_B6RAE8 Transcriptional Regulator, LysR family n=1 Tax=P... 269 8e-71 UniRef50_A4GJC2 Transcriptional regulator LysR family protein n=... 269 8e-71 UniRef50_B9B1S8 Transcriptional regulator, LysR family n=1 Tax=B... 269 9e-71 UniRef50_A5WDE8 Transcriptional regulator, LysR family n=1 Tax=P... 269 1e-70 UniRef50_D0LUZ7 Transcriptional regulator, LysR family n=1 Tax=H... 268 2e-70 UniRef50_Q1LD16 Transcriptional regulator, LysR family n=8 Tax=P... 268 2e-70 UniRef50_D0FZR1 LysR-type transcriptional regulator n=2 Tax=Rhod... 268 2e-70 UniRef50_C2LG43 LysR-family transcriptional regulator n=4 Tax=En... 268 3e-70 UniRef50_D0RY94 Transcriptional regulator n=4 Tax=Acinetobacter ... 268 3e-70 UniRef50_Q5LN55 Transcriptional regulator, LysR family n=4 Tax=R... 267 3e-70 UniRef50_A4JED2 Transcriptional regulator, LysR family n=9 Tax=P... 267 4e-70 UniRef50_Q687Z9 LysR-type activator n=1 Tax=Sphingopyxis macrogo... 266 5e-70 UniRef50_A6FY23 Transcriptional regulator, LysR family protein n... 266 6e-70 UniRef50_Q1R0T8 Transcriptional regulator, LysR family n=9 Tax=G... 266 6e-70 UniRef50_B0C4T0 Transcriptional regulator, LysR family n=1 Tax=A... 266 7e-70 UniRef50_A1UYR8 Transcriptional regulator, LysR family n=32 Tax=... 266 7e-70 UniRef50_Q2KYC5 LysR-family transcriptional regulator n=9 Tax=Bu... 266 7e-70 UniRef50_C5CZA2 Transcriptional regulator, LysR family n=1 Tax=V... 266 7e-70 UniRef50_Q7NT25 Probable transcription regulator protein n=1 Tax... 266 1e-69 UniRef50_A1WMY5 Transcriptional regulator, LysR family n=1 Tax=V... 266 1e-69 UniRef50_Q0SCY7 Transcriptional regulator, LysR family protein n... 266 1e-69 UniRef50_C5CZY6 Transcriptional regulator, LysR family n=1 Tax=V... 265 1e-69 UniRef50_A0KH33 Transcriptional regulator, LysR family n=2 Tax=A... 265 1e-69 UniRef50_D1P5Q9 Transcriptional regulator, LysR family n=1 Tax=P... 265 1e-69 UniRef50_A5VEA0 Transcriptional regulator, LysR family n=1 Tax=S... 265 2e-69 UniRef50_A6X639 Transcriptional regulator, LysR family n=1 Tax=O... 264 2e-69 UniRef50_B7RV99 Transcriptional regulator, LysR family protein n... 264 2e-69 UniRef50_Q0K3U9 Transcriptional regulator, LysR-family n=2 Tax=B... 264 3e-69 UniRef50_Q8XRG7 Probable transcriptional regulator transcription... 264 4e-69 UniRef50_A0KIB7 Transcriptional regulator, LysR family n=2 Tax=A... 263 4e-69 UniRef50_A2SDX3 Transcriptional regulator, LysR family n=6 Tax=B... 263 5e-69 UniRef50_Q7MFJ9 Transcriptional regulator n=28 Tax=Vibrio RepID=... 263 6e-69 UniRef50_C6BS61 Transcriptional regulator, LysR family n=1 Tax=D... 263 6e-69 UniRef50_Q1M9F6 Putative LysR-family transcriptional regulator n... 263 6e-69 UniRef50_B5XYZ1 Transcriptional regulator, LysR family n=5 Tax=K... 263 7e-69 UniRef50_Q0BYJ0 Transcriptional regulator, LysR family n=1 Tax=H... 263 9e-69 UniRef50_D1SW87 Transcriptional regulator, LysR family n=1 Tax=A... 262 1e-68 UniRef50_D2B6V0 LysR family transcriptional regulator n=5 Tax=Ac... 262 1e-68 UniRef50_Q9FD34 PnbR n=2 Tax=Pseudomonas RepID=Q9FD34_PSEPU 262 1e-68 UniRef50_B2JFW9 Transcriptional regulator, LysR family n=39 Tax=... 261 2e-68 UniRef50_A4Z170 Putative transcriptional regulatory protein, Lys... 261 2e-68 UniRef50_C0ZNV8 Putative LysR family transcriptional regulator n... 261 2e-68 UniRef50_A0K340 Transcriptional regulator, LysR family n=1 Tax=B... 261 2e-68 UniRef50_C4I668 Transcriptional regulator, LysR family n=80 Tax=... 261 2e-68 UniRef50_A3YI62 Transcriptional regulator, LysR family protein n... 261 2e-68 UniRef50_A6GJJ5 Regulatory protein, LysR:LysR, substrate-binding... 261 2e-68 UniRef50_Q2CCM2 Transcriptional regulator, LysR family protein n... 261 2e-68 UniRef50_A1UXD8 Transcriptional regulator, LysR family n=41 Tax=... 261 3e-68 UniRef50_A6CYZ8 Hypothetical transcriptional regulator, LysR fam... 260 4e-68 UniRef50_B9JQ31 Transcriptional regulator n=1 Tax=Agrobacterium ... 260 4e-68 UniRef50_A3VWI6 Transcriptional regulatory protein n=1 Tax=Roseo... 259 6e-68 UniRef50_D2C014 Transcriptional regulator, LysR family n=1 Tax=D... 259 7e-68 UniRef50_Q7WJY9 Probable LysR-family transcription regulator n=1... 259 1e-67 UniRef50_B4ELV6 LysR family regulatory protein n=1 Tax=Burkholde... 259 1e-67 UniRef50_A7JRS0 Possible LysR family transcriptional regulator n... 259 1e-67 UniRef50_Q081Z6 Transcriptional regulator, LysR family n=1 Tax=S... 258 1e-67 UniRef50_B7VQV6 Transcriptional regulator n=10 Tax=Vibrionales R... 258 1e-67 UniRef50_Q15TE0 Transcriptional regulator, LysR family n=4 Tax=A... 258 2e-67 UniRef50_UPI0000383CFA COG0583: Transcriptional regulator n=1 Ta... 258 2e-67 UniRef50_A3RSL5 Transcriptional regulators, LysR family n=4 Tax=... 258 2e-67 UniRef50_Q46MT9 Regulatory protein, LysR:LysR, substrate-binding... 258 2e-67 UniRef50_B7QWJ8 Transcriptional regulator, LysR family n=1 Tax=R... 258 2e-67 UniRef50_C7RD08 Transcriptional regulator, LysR family n=1 Tax=K... 258 2e-67 UniRef50_Q5E7C7 Transcriptional regulator, LysR family n=5 Tax=V... 258 2e-67 UniRef50_A1U796 Transcriptional regulator, LysR family n=3 Tax=M... 258 2e-67 UniRef50_D2YJX0 Transcriptional regulator, LysR family n=1 Tax=V... 258 3e-67 UniRef50_A4SH82 Transcriptional regulator, LysR family n=2 Tax=A... 258 3e-67 UniRef50_D1P3H6 Transcriptional regulator, LysR family n=1 Tax=P... 258 3e-67 UniRef50_A8GZD3 Transcriptional regulator, LysR family n=22 Tax=... 257 3e-67 UniRef50_B4RWU1 Transcriptional regulator n=2 Tax=Alteromonas ma... 257 3e-67 UniRef50_Q88LJ0 Transcriptional regulator, LysR family n=1 Tax=P... 257 4e-67 UniRef50_Q399F7 Transcriptional regulator, LysR family n=1 Tax=B... 257 4e-67 UniRef50_P52679 PCP degradation transcriptional activation prote... 257 4e-67 UniRef50_Q7D3I0 Transcriptional regulator, LysR family n=1 Tax=A... 257 5e-67 UniRef50_B4E7M9 LysR family regulatory protein n=1 Tax=Burkholde... 257 5e-67 UniRef50_A1R1P0 Putative transcriptional regulator, LysR family ... 256 5e-67 UniRef50_C6XR04 Transcriptional regulator, LysR family n=1 Tax=H... 256 7e-67 UniRef50_A7K354 LysR substrate binding domain protein n=17 Tax=G... 255 1e-66 UniRef50_Q2SHJ0 Transcriptional regulator n=1 Tax=Hahella chejue... 255 1e-66 UniRef50_B8ERS8 Transcriptional regulator, LysR family n=1 Tax=M... 255 2e-66 UniRef50_Q7MC61 Transcriptional regulator n=9 Tax=Gammaproteobac... 255 2e-66 UniRef50_B1MJW3 Putative transcriptional regulator, LysR family ... 254 2e-66 UniRef50_D0RZK6 Transcriptional regulator n=1 Tax=Acinetobacter ... 254 2e-66 UniRef50_B9J825 Nod transcriptional regulator protein n=1 Tax=Ag... 254 2e-66 UniRef50_B1K4K0 Transcriptional regulator, LysR family n=3 Tax=B... 254 2e-66 UniRef50_Q7MQI2 Transcriptional regulator n=36 Tax=Gammaproteoba... 254 3e-66 UniRef50_B9Z947 Transcriptional regulator, LysR family n=1 Tax=L... 254 3e-66 UniRef50_B5ZVD7 Transcriptional regulator, LysR family n=4 Tax=R... 254 3e-66 UniRef50_A5VBV3 Transcriptional regulator, LysR family n=1 Tax=S... 254 3e-66 UniRef50_A0NZC9 LysR family regulatory protein n=3 Tax=Rhodobact... 254 4e-66 UniRef50_A5F3E5 Transcriptional regulator, LysR family n=29 Tax=... 254 4e-66 UniRef50_B9K150 Transcriptional regulator LysR family n=1 Tax=Ag... 254 4e-66 UniRef50_B5JUQ0 Transcriptional regulator, LysR family, putative... 253 5e-66 UniRef50_B7VJC4 Putative LysR-like regular protein n=4 Tax=Vibri... 253 5e-66 UniRef50_A6W028 Transcriptional regulator, LysR family n=1 Tax=M... 253 5e-66 UniRef50_A1UYG7 Transcriptional regulator, LysR family n=45 Tax=... 253 5e-66 UniRef50_UPI0001B54141 LysR family transcriptional regulator n=1... 253 6e-66 UniRef50_B2T3Y4 Transcriptional regulator, LysR family n=3 Tax=B... 253 7e-66 UniRef50_Q7MCZ8 Transcriptional regulator n=13 Tax=Vibrionaceae ... 253 7e-66 UniRef50_Q5ZSZ0 Transcriptional regulator, LysR family n=4 Tax=L... 253 8e-66 UniRef50_Q471I4 Regulatory protein, LysR:LysR, substrate-binding... 253 9e-66 UniRef50_A5VCH0 Transcriptional regulator, LysR family n=1 Tax=S... 253 9e-66 UniRef50_Q2BMZ3 Putative transcriptional regulator, LysR family ... 253 9e-66 UniRef50_A9F0I7 Transcriptional regulator, LysR family n=20 Tax=... 252 1e-65 UniRef50_Q8KY13 LysR-type transcriptional activator n=1 Tax=Rhiz... 252 1e-65 UniRef50_Q5QVJ9 Transcriptional regulator, LysR family n=1 Tax=I... 252 1e-65 UniRef50_P55359 Nodulation protein D 1 n=250 Tax=Proteobacteria ... 252 1e-65 UniRef50_A5V6I2 Transcriptional regulator, LysR family n=1 Tax=S... 252 1e-65 UniRef50_A4XED3 Transcriptional regulator, LysR family n=1 Tax=N... 251 2e-65 UniRef50_Q0JY95 Transcriptional regulator, LysR-family n=4 Tax=P... 251 2e-65 UniRef50_C6B2W9 Transcriptional regulator, LysR family n=4 Tax=R... 251 3e-65 UniRef50_A6ARN3 Transcriptional regulator, LysR family n=4 Tax=V... 251 3e-65 UniRef50_A8KZI9 Transcriptional regulator, LysR family n=4 Tax=A... 251 3e-65 UniRef50_A3X6E2 Transcriptional regulatory protein n=1 Tax=Roseo... 251 4e-65 UniRef50_A0KG94 Transcriptional regulator, LysR family n=5 Tax=G... 250 5e-65 UniRef50_B7X2W7 Transcriptional regulator, LysR family n=1 Tax=C... 250 5e-65 UniRef50_A1K8D7 Transcriptional regulator, LysR family n=1 Tax=A... 250 5e-65 UniRef50_Q11CG0 Transcriptional regulator, LysR family n=1 Tax=C... 250 6e-65 UniRef50_A4WEP5 Transcriptional regulator, LysR family n=1 Tax=E... 249 7e-65 UniRef50_Q081K6 Transcriptional regulator, LysR family n=2 Tax=A... 249 8e-65 UniRef50_A3Y6R5 Transcriptional regulator, LysR family protein n... 249 8e-65 UniRef50_A8FU12 Transcriptional regulator n=2 Tax=Gammaproteobac... 249 9e-65 UniRef50_A8FYY5 Transcriptional regulator, LysR family n=2 Tax=S... 249 1e-64 UniRef50_A6V5Q0 MexT protein n=1 Tax=Pseudomonas aeruginosa PA7 ... 249 1e-64 UniRef50_D0J6E9 Transcriptional regulator, LysR family n=2 Tax=C... 248 1e-64 UniRef50_Q0BCW3 Transcriptional regulator, LysR family n=30 Tax=... 248 2e-64 UniRef50_Q3S4D5 LysR-like regular protein n=1 Tax=Polaromonas na... 248 2e-64 UniRef50_A6V8B0 Transcriptional regulator, LysR family n=10 Tax=... 248 2e-64 UniRef50_A6F7C1 Transcriptional regulator n=1 Tax=Moritella sp. ... 248 2e-64 UniRef50_B5ZKB2 Transcriptional regulator, LysR family n=2 Tax=G... 248 3e-64 UniRef50_A9R140 Substrate-binding transcriptional regulator, Lys... 248 3e-64 UniRef50_Q15XK7 Transcriptional regulator, LysR family n=1 Tax=P... 247 3e-64 UniRef50_A6UK78 Transcriptional regulator, LysR family n=2 Tax=S... 247 4e-64 UniRef50_A8TNA4 Transcriptional regulator MexT n=1 Tax=alpha pro... 247 4e-64 UniRef50_A6W2N0 Transcriptional regulator, LysR family n=1 Tax=M... 247 4e-64 UniRef50_Q5E2I6 DNA-binding transcriptional activator n=65 Tax=G... 247 5e-64 UniRef50_A8IJ97 Putative transcriptional regulator n=1 Tax=Azorh... 247 5e-64 UniRef50_B1LYW9 Transcriptional regulator, LysR family n=10 Tax=... 247 5e-64 UniRef50_Q1GFT2 Transcriptional regulator, LysR family n=1 Tax=R... 246 9e-64 UniRef50_C5CV67 Transcriptional regulator, LysR family n=1 Tax=V... 246 9e-64 UniRef50_A8H854 Transcriptional regulator, LysR family n=1 Tax=S... 246 9e-64 UniRef50_B2JTT0 Transcriptional regulator, LysR family n=3 Tax=B... 245 1e-63 UniRef50_A4XRF8 Transcriptional regulator, LysR family n=2 Tax=P... 245 1e-63 UniRef50_Q4KKE5 Transcriptional regulator, LysR family n=27 Tax=... 245 1e-63 UniRef50_A1SEI3 Transcriptional regulator, LysR family n=1 Tax=N... 245 2e-63 UniRef50_B5ZKC3 Transcriptional regulator, LysR family n=7 Tax=P... 245 2e-63 UniRef50_A7HRT9 Transcriptional regulator, LysR family n=1 Tax=P... 244 3e-63 UniRef50_A9BZQ9 Transcriptional regulator, LysR family n=1 Tax=D... 244 4e-63 UniRef50_B5WAN2 Transcriptional regulator, LysR family n=1 Tax=B... 244 4e-63 UniRef50_B0KG68 Transcriptional regulator, LysR family n=9 Tax=P... 244 4e-63 UniRef50_A6GE91 Probable transcription regulator protein n=1 Tax... 244 4e-63 UniRef50_B8IVY8 Transcriptional regulator, LysR family n=4 Tax=P... 243 5e-63 UniRef50_Q15XL4 Transcriptional regulator, LysR family n=1 Tax=P... 243 5e-63 UniRef50_UPI0001BCC5DA LysR family transcriptional regulator n=1... 243 7e-63 UniRef50_A0R264 Transcriptional regulator, LysR family protein n... 243 7e-63 UniRef50_A0JW61 Transcriptional regulator, LysR family n=1 Tax=A... 243 7e-63 UniRef50_A6SVA6 Transcriptional regulator, LysR family n=1 Tax=J... 242 8e-63 UniRef50_Q2SG65 Transcriptional regulator n=1 Tax=Hahella chejue... 242 9e-63 UniRef50_Q7MEK1 Transcriptional regulator n=15 Tax=Vibrionaceae ... 242 1e-62 UniRef50_B6R352 Transcriptional regulator, LysR family n=1 Tax=P... 242 1e-62 UniRef50_B5XRQ2 Transcriptional regulator, LysR family n=4 Tax=K... 242 1e-62 UniRef50_Q9RBI3 SalR n=2 Tax=Acinetobacter RepID=Q9RBI3_ACIAD 242 1e-62 UniRef50_C4V039 Transcriptional regulator, LysR family n=4 Tax=E... 242 1e-62 UniRef50_Q15Y73 Transcriptional regulator, LysR family n=1 Tax=P... 242 1e-62 UniRef50_C5A8T0 Transcriptional regulator, LysR family protein n... 241 2e-62 UniRef50_B7RWY7 LysR substrate binding domain protein n=2 Tax=un... 241 3e-62 UniRef50_C9NTB9 LysR-like transcriptional regulator n=5 Tax=Vibr... 241 3e-62 UniRef50_D0LQN8 Transcriptional regulator, LysR family n=1 Tax=H... 241 3e-62 UniRef50_Q477L7 Regulatory protein, LysR:LysR, substrate-binding... 241 3e-62 UniRef50_B4S2V4 Transcriptional regulator, LysR family protein n... 241 3e-62 UniRef50_B3YF82 Transcriptional regulator, LysR family n=2 Tax=S... 241 3e-62 UniRef50_A9BUT0 Transcriptional regulator, LysR family n=5 Tax=C... 241 3e-62 UniRef50_Q122D0 Transcriptional regulator, LysR family n=1 Tax=P... 240 5e-62 UniRef50_A3VA58 Transcriptional regulatory protein n=2 Tax=cellu... 240 5e-62 UniRef50_B2I0F3 Transcriptional regulator n=11 Tax=Acinetobacter... 239 7e-62 UniRef50_B3QAJ4 Transcriptional regulator, LysR family n=4 Tax=A... 239 7e-62 UniRef50_B5XW08 Transcriptional regulator, LysR family n=9 Tax=E... 239 7e-62 UniRef50_Q38ZY8 Transcriptional regulator, LysR family n=1 Tax=B... 239 8e-62 UniRef50_Q3IKZ1 Putative transcriptional regulator of the LysR f... 239 9e-62 UniRef50_B5ZWA1 Transcriptional regulator, LysR family n=4 Tax=R... 239 1e-61 UniRef50_D2I932 Putative LysR family transcriptional regulator n... 239 1e-61 UniRef50_A5CSX6 Putative transcriptional regulator, LysR family ... 239 1e-61 UniRef50_A9FS02 LysR-family transcriptional regulator n=1 Tax=So... 239 1e-61 UniRef50_A0NXF9 Probable transcription regulator protein n=2 Tax... 239 1e-61 UniRef50_C3MFM7 Putative transcriptional regulator, LysR family ... 238 2e-61 UniRef50_C3K6Q2 Nodulation protein D n=1 Tax=Pseudomonas fluores... 238 2e-61 UniRef50_A8H3B3 Transcriptional regulator, LysR family n=7 Tax=G... 238 2e-61 UniRef50_Q2CK92 Transcriptional regulator, LysR family protein n... 238 2e-61 UniRef50_B5F9Z3 Transcriptional regulator, LysR family n=3 Tax=V... 238 2e-61 UniRef50_A9AMZ1 Transcriptional regulator, LysR family n=6 Tax=P... 238 2e-61 UniRef50_D0XU87 Transcriptional regulator, LysR family n=1 Tax=C... 237 3e-61 UniRef50_Q0VH46 Putative LysR type regulator n=3 Tax=Proteobacte... 237 3e-61 UniRef50_A8T595 Transcriptional regulator, LysR family, putative... 237 3e-61 UniRef50_Q2KBI7 Probable transcriptional regulator protein, LysR... 237 3e-61 UniRef50_Q89SA1 Transcriptional regulatory protein n=1 Tax=Brady... 237 3e-61 UniRef50_A3KIZ0 Putative LysR-family transcriptional regulatory ... 237 3e-61 UniRef50_Q5ZSW4 Regulatory protein (LysR transcriptional regulat... 237 4e-61 UniRef50_Q1Z9L0 Putative transcriptional regulator, LysR family ... 237 5e-61 UniRef50_D0XGK1 Putative uncharacterized protein n=1 Tax=Vibrio ... 236 6e-61 UniRef50_A9F1C1 Transcriptional regulator, LysR family n=1 Tax=S... 236 7e-61 UniRef50_P55733 HTH-type transcriptional regulator syrM 2 n=13 T... 236 7e-61 UniRef50_Q1ZB78 Transcriptional regulator, LysR family protein n... 236 8e-61 UniRef50_A6CXP0 Transcriptional regulator, LysR family protein n... 236 9e-61 UniRef50_B0TPA4 Transcriptional regulator, LysR family n=2 Tax=S... 236 9e-61 UniRef50_Q1YUH5 Nodulation protein d1 n=1 Tax=gamma proteobacter... 236 1e-60 UniRef50_Q4FSR3 Transcriptional regulator, LysR family n=3 Tax=G... 236 1e-60 UniRef50_B8KHQ9 Transcriptional regulator, LysR family n=1 Tax=g... 235 1e-60 UniRef50_Q15SK5 Transcriptional regulator, LysR family n=9 Tax=G... 235 2e-60 UniRef50_Q7D3Y4 Transcriptional regulator, LysR family n=3 Tax=P... 234 2e-60 UniRef50_Q391W5 Transcriptional regulator, LysR family n=3 Tax=B... 234 2e-60 UniRef50_C9QF24 Transcriptional regulators LysR family n=1 Tax=V... 234 3e-60 UniRef50_B8CHD0 Regulatory protein, LysR:LysR, substrate-binding... 234 3e-60 UniRef50_UPI0001AEE3BF LysR family transcriptional regulator n=1... 234 3e-60 UniRef50_Q7MCM8 Transcriptional regulator n=8 Tax=Vibrionaceae R... 234 4e-60 UniRef50_B9QVA6 LysR substrate binding domain protein n=1 Tax=La... 234 4e-60 UniRef50_A8H6N4 Transcriptional regulator, LysR family n=3 Tax=S... 233 6e-60 UniRef50_A6AT33 Transcriptional regulator n=2 Tax=Vibrio harveyi... 233 6e-60 UniRef50_B6AU51 Transcriptional regulator, LysR family, putative... 233 6e-60 UniRef50_Q87I72 Putative transcriptional regulator, LysR family ... 233 7e-60 UniRef50_P46924 Probable HTH-type transcriptional regulator leuO... 233 7e-60 UniRef50_D0DE94 Transcriptional regulator, LysR family n=1 Tax=C... 233 7e-60 UniRef50_B7VQ63 Transcriptional regulators, LysR family n=3 Tax=... 233 8e-60 UniRef50_B7X552 Transcriptional regulator, LysR family n=1 Tax=C... 233 8e-60 UniRef50_B5HRF1 Transcriptional regulator n=1 Tax=Streptomyces s... 233 8e-60 UniRef50_Q9ZHH8 LysR-type transcriptional regulator PhnS n=1 Tax... 232 9e-60 UniRef50_Q391B6 Transcriptional regulator, LysR family n=1 Tax=B... 232 1e-59 UniRef50_A0AZD8 Transcriptional regulator, LysR family n=17 Tax=... 232 1e-59 UniRef50_C5B758 Transcriptional regulator, LysR family, putative... 232 1e-59 UniRef50_A8H9L3 Transcriptional regulator, LysR family n=5 Tax=S... 232 1e-59 UniRef50_Q4KCL9 Transcriptional regulator, LysR family n=15 Tax=... 231 2e-59 UniRef50_C6C4P6 Transcriptional regulator, LysR family n=4 Tax=P... 231 2e-59 UniRef50_B7VP76 Transcriptional regulator (Lys R family) n=2 Tax... 231 2e-59 UniRef50_B1KHA3 Transcriptional regulator, LysR family n=1 Tax=S... 231 2e-59 UniRef50_Q4KGL9 Transcriptional regulator, LysR family n=15 Tax=... 230 5e-59 UniRef50_B8H6G8 Transcriptional regulator, LysR family n=1 Tax=A... 229 7e-59 UniRef50_B9JQA8 Transcriptional regulator n=1 Tax=Agrobacterium ... 229 7e-59 UniRef50_A5L763 Transcriptional regulator n=1 Tax=Vibrionales ba... 229 8e-59 UniRef50_C3KQ67 Transcriptional regulator, LysR family n=1 Tax=R... 229 8e-59 UniRef50_Q5LVV7 Transcriptional regulator, LysR family n=2 Tax=R... 229 1e-58 UniRef50_Q9ZN79 HTH-type transcriptional regulator linR n=6 Tax=... 229 1e-58 UniRef50_C8WFJ3 Transcriptional regulator, LysR family n=3 Tax=Z... 228 2e-58 UniRef50_A6D744 Putative transcriptional regulator n=1 Tax=Vibri... 228 2e-58 UniRef50_A4BGW0 Probable transcription regulator protein n=1 Tax... 228 2e-58 UniRef50_Q2P1D7 Transcriptional regulator n=5 Tax=Xanthomonas Re... 228 2e-58 UniRef50_Q47ZN8 Transcriptional regulator, LysR family n=1 Tax=C... 228 3e-58 UniRef50_A0Z258 Transcriptional regulator, LysR family protein n... 227 3e-58 UniRef50_Q0B1J5 Transcriptional regulator, LysR family n=1 Tax=B... 227 3e-58 UniRef50_B8H6I0 Transcriptional regulator, LysR family n=1 Tax=A... 227 3e-58 UniRef50_A6VZT8 Transcriptional regulator, LysR family n=1 Tax=M... 227 3e-58 UniRef50_Q1YVH2 Transcriptional regulator, LysR family protein n... 227 3e-58 UniRef50_A6EZR5 Transcriptional regulator, LysR family protein n... 227 3e-58 UniRef50_B2VHH8 Transcriptional regulator, LysR family n=1 Tax=E... 227 4e-58 UniRef50_A8LRQ2 Transcriptional regulator, LysR family n=1 Tax=D... 227 4e-58 UniRef50_C7Q503 Transcriptional regulator, LysR family n=1 Tax=C... 227 5e-58 UniRef50_C1DPW4 Transcriptional regulator MexT n=34 Tax=Pseudomo... 227 5e-58 UniRef50_B9KX50 Transcriptional regulator, LysR family n=3 Tax=R... 226 7e-58 UniRef50_B8E7T8 Transcriptional regulator, LysR family n=7 Tax=S... 226 8e-58 UniRef50_Q5W9E2 Putative LysR-type transcriptional regulator n=2... 226 8e-58 UniRef50_B7VJR0 Transcriptional regulator n=7 Tax=Vibrionaceae R... 226 9e-58 UniRef50_Q1LS52 Transcriptional regulator, LysR family n=1 Tax=C... 226 9e-58 UniRef50_C4WHZ4 Transcriptional regulator, LysR family n=1 Tax=O... 226 1e-57 UniRef50_C9PE36 Probable transcription regulator protein n=2 Tax... 226 1e-57 UniRef50_A3Y7F5 Transcriptional regulator n=1 Tax=Marinomonas sp... 226 1e-57 UniRef50_Q0FX50 Transcriptional regulator, LysR family protein n... 225 1e-57 UniRef50_A6FLE2 Transcriptional regulator, LysR family protein n... 225 1e-57 UniRef50_B7VH72 Transcriptional regulator n=4 Tax=Vibrionales Re... 225 1e-57 UniRef50_Q2BLC9 LysR family regulatory protein n=1 Tax=Neptuniib... 225 2e-57 UniRef50_C3KNK2 Transcriptional regulator, LysR family n=1 Tax=R... 225 2e-57 UniRef50_A3YE73 Putative transcriptional regulator, LysR family ... 224 3e-57 UniRef50_A6CVD4 Transcriptional regulator, LysR family protein n... 224 5e-57 UniRef50_A0R6U4 Transcriptional regulator, LysR family protein n... 224 5e-57 UniRef50_Q6LMQ1 Hypothetical LysR-like regular protein n=2 Tax=P... 223 7e-57 UniRef50_A0KFY0 Transcriptional regulator, LysR family n=2 Tax=A... 223 7e-57 UniRef50_Q2SKI3 Transcriptional regulator n=3 Tax=Oceanospirilla... 223 7e-57 UniRef50_P52698 HTH-type transcriptional regulator phcA n=16 Tax... 223 8e-57 UniRef50_D0LJ37 Transcriptional regulator, LysR family n=1 Tax=H... 222 8e-57 UniRef50_A7JY25 Transcriptional regulators LysR family n=9 Tax=V... 222 9e-57 UniRef50_A0AZB3 Transcriptional regulator, LysR family n=14 Tax=... 222 1e-56 UniRef50_Q1ZAU1 Transcriptional regulator, LysR family protein n... 222 1e-56 UniRef50_B7VQ80 Transcriptional regulators, LysR family n=6 Tax=... 222 1e-56 UniRef50_A9GK88 Transcriptional regulator, LysR family n=1 Tax=S... 222 2e-56 UniRef50_A6CYC8 Probable transcription regulator protein n=1 Tax... 221 2e-56 UniRef50_A3K9S7 Transcriptional regulator, LysR family protein n... 221 3e-56 UniRef50_Q5E5X9 Transcriptional regulator, LysR family n=2 Tax=V... 221 3e-56 UniRef50_D0XC19 Putative uncharacterized protein n=1 Tax=Vibrio ... 221 4e-56 UniRef50_A6W1I8 Transcriptional regulator, LysR family n=2 Tax=M... 220 5e-56 UniRef50_Q085G5 Transcriptional regulator, LysR family n=1 Tax=S... 220 5e-56 UniRef50_Q0S6Z6 Transcriptional regulator, LysR family protein n... 220 7e-56 UniRef50_Q2T8G4 Transcriptional regulator, LysR family n=14 Tax=... 220 7e-56 UniRef50_B7RZL5 Transcriptional regulator, LysR family protein n... 219 8e-56 UniRef50_A6CV60 Transcriptional regulator, LysR family protein n... 219 9e-56 UniRef50_B9QU66 LysR substrate binding domain protein n=1 Tax=La... 219 1e-55 UniRef50_Q486J0 Transcriptional regulator, LysR family n=4 Tax=G... 219 1e-55 UniRef50_B9K0N9 Transcriptional regulator LysR family n=1 Tax=Ag... 219 1e-55 UniRef50_Q5YUN1 Putative transcriptional regulator n=2 Tax=Actin... 219 1e-55 UniRef50_Q7MCL9 Putative transcriptional regulator n=1 Tax=Vibri... 218 2e-55 UniRef50_B8K5X2 Transcription regulator, LysR family n=1 Tax=Vib... 218 2e-55 UniRef50_Q7MG62 Transcriptional regulator n=6 Tax=Vibrionales Re... 218 2e-55 UniRef50_B5HPI9 Transcriptional regulator n=7 Tax=Streptomyces R... 218 3e-55 UniRef50_C9NWM2 Transcriptional regulator LysR family protein n=... 217 3e-55 UniRef50_Q7MNI1 Transcriptional regulator n=5 Tax=Gammaproteobac... 217 3e-55 UniRef50_A6FDU8 Transcriptional regulator, LysR family protein n... 217 3e-55 UniRef50_C7JF91 Transcriptional regulator LysR n=19 Tax=Alphapro... 217 3e-55 UniRef50_Q1YX76 Transcriptional regulators, LysR family protein ... 217 5e-55 UniRef50_C7Q333 Transcriptional regulator, LysR family n=1 Tax=C... 217 5e-55 UniRef50_A4EYL1 Transcriptional regulator, LysR family protein n... 216 6e-55 UniRef50_Q097I8 Regulatory protein, LysR:LysR, substrate-binding... 216 8e-55 UniRef50_C4LDS5 Transcriptional regulator, LysR family n=1 Tax=T... 216 9e-55 UniRef50_A5IDS9 Transcriptional regulator, LysR family n=5 Tax=L... 216 9e-55 UniRef50_C9YZ14 LysR-family transcriptional regulator n=2 Tax=St... 216 9e-55 UniRef50_Q1Z8G0 Probable transcription regulator protein n=1 Tax... 215 1e-54 UniRef50_Q1V9Y1 Transcriptional regulator, LysR family protein n... 215 1e-54 UniRef50_B0SY67 Transcriptional regulator, LysR family n=1 Tax=C... 215 2e-54 UniRef50_Q16B23 Transcriptional regulator, LysR family, putative... 215 2e-54 UniRef50_Q7MEL0 Transcriptional regulator n=18 Tax=Gammaproteoba... 214 3e-54 UniRef50_A6E126 Transcriptional regulator, LysR family protein n... 214 4e-54 UniRef50_B7VU21 Transcriptional regulators, LysR family n=1 Tax=... 213 7e-54 UniRef50_C4XHV5 Putative uncharacterized protein n=2 Tax=Desulfo... 211 2e-53 UniRef50_B8K3C7 Putative uncharacterized protein n=1 Tax=Vibrio ... 211 2e-53 UniRef50_B7VQM7 Transcriptional regulators, LysR family protein ... 211 3e-53 UniRef50_A7IHY6 Transcriptional regulator, LysR family n=1 Tax=X... 211 3e-53 UniRef50_B5ET44 Transcriptional regulator n=1 Tax=Vibrio fischer... 211 3e-53 UniRef50_A8H681 Transcriptional regulator, LysR family n=2 Tax=G... 210 5e-53 UniRef50_Q930K8 Transcriptional regulator, LysR family n=2 Tax=A... 210 6e-53 UniRef50_A9BQF2 Transcriptional regulator, LysR family n=8 Tax=P... 209 7e-53 UniRef50_C4SSY1 Transcriptional regulator n=1 Tax=Yersinia frede... 209 8e-53 UniRef50_P30979 Uncharacterized HTH-type transcriptional regulat... 209 1e-52 UniRef50_C7QG09 Transcriptional regulator, LysR family n=7 Tax=A... 209 1e-52 UniRef50_B8GXY5 Transcriptional regulator, LysR family n=2 Tax=C... 209 1e-52 UniRef50_Q5DZ29 Transcriptional regulator, LysR family n=2 Tax=V... 208 2e-52 UniRef50_C9D2D7 Transcriptional regulator, LysR family n=1 Tax=S... 207 4e-52 UniRef50_A5KW47 Transcriptional regulator, LysR family protein n... 206 6e-52 UniRef50_B2I282 Transcriptional regulator n=17 Tax=Acinetobacter... 206 8e-52 UniRef50_D0XIH8 Putative uncharacterized protein n=1 Tax=Vibrio ... 206 9e-52 UniRef50_B4TAI7 LysR-family transcriptional regulator n=40 Tax=E... 206 1e-51 UniRef50_A3JPL5 Transcriptional regulator, LysR family protein n... 205 2e-51 UniRef50_A0AWD6 Transcriptional regulator, LysR family n=2 Tax=A... 204 2e-51 UniRef50_C8PY46 Transcriptional regulator, LysR family n=1 Tax=E... 203 6e-51 UniRef50_A6CWQ5 Transcriptional regulator, LysR family protein n... 203 9e-51 UniRef50_A6W9Y1 Transcriptional regulator, LysR family n=3 Tax=A... 202 1e-50 UniRef50_Q1LCA7 Transcriptional regulator, LysR family n=1 Tax=C... 202 1e-50 UniRef50_A6CV71 Putative transcriptional regulator n=1 Tax=Vibri... 202 2e-50 UniRef50_C9XYN5 Uncharacterized HTH-type transcriptional regulat... 201 2e-50 UniRef50_C5ALA9 Transcriptional regulator, LysR family protein n... 200 5e-50 UniRef50_Q1GIZ4 Transcriptional regulator, LysR family n=1 Tax=R... 199 8e-50 UniRef50_UPI0001AF1AB6 LysR family transcriptional regulator n=2... 199 1e-49 UniRef50_Q47ZG5 Transcriptional regulator, LysR family n=2 Tax=A... 197 3e-49 UniRef50_B1KKW0 Transcriptional regulator, LysR family n=3 Tax=S... 197 3e-49 UniRef50_D0YJS8 Transcriptional regulator, LysR family n=2 Tax=K... 196 9e-49 UniRef50_Q0HIH2 Transcriptional regulator, LysR family n=5 Tax=G... 195 2e-48 UniRef50_Q2NRV1 Putative transcriptional regulator n=1 Tax=Sodal... 194 4e-48 UniRef50_Q5YTB7 Putative transcriptional regulator n=1 Tax=Nocar... 194 4e-48 UniRef50_D0XIC6 Putative uncharacterized protein n=1 Tax=Vibrio ... 193 5e-48 UniRef50_Q489T6 Transcriptional regulator, LysR family n=1 Tax=C... 193 7e-48 UniRef50_Q2JZS7 Putative transcriptional regulator protein, LysR... 191 3e-47 UniRef50_A7JY23 Transcriptional regulator LysR family n=3 Tax=Vi... 191 3e-47 UniRef50_Q5E1I8 Transcriptional regulator, LysR family n=3 Tax=V... 191 3e-47 UniRef50_UPI0001826721 hypothetical protein EcanA3_12211 n=1 Tax... 189 8e-47 UniRef50_Q1ZAV3 Transcriptional regulators, LysR family protein ... 187 4e-46 UniRef50_A6U9H6 Transcriptional regulator, LysR family n=2 Tax=S... 187 6e-46 UniRef50_B7S1T9 Transcriptional regulator, LysR family protein n... 185 2e-45 UniRef50_C1D8R3 Probable transcriptional regulator, LysR family ... 184 3e-45 UniRef50_A6CX36 Transcriptional regulator n=1 Tax=Vibrio shiloni... 184 4e-45 UniRef50_Q7VQS7 LysR-family transcriptional regulator n=2 Tax=Ca... 184 4e-45 UniRef50_A1WF12 Transcriptional regulator, LysR family n=1 Tax=V... 184 4e-45 UniRef50_B3Q4H2 Putative transcriptional regulator protein, LysR... 184 4e-45 UniRef50_Q7NZ43 Probable transcription regulator protein, LysR f... 182 1e-44 UniRef50_O69616 NodD protein (Fragment) n=1 Tax=Mesorhizobium sp... 181 2e-44 UniRef50_Q1T7B6 Putative LysR-type transcriptional activator n=1... 180 4e-44 UniRef50_P77746 Uncharacterized HTH-type transcriptional regulat... 180 5e-44 UniRef50_UPI0001907B05 LysR family transcriptional regulator n=1... 179 1e-43 UniRef50_A6AR16 Transcriptional regulator n=10 Tax=Vibrionaceae ... 179 1e-43 UniRef50_Q8KN32 Putative LysR type transcriptional regulator (Fr... 177 3e-43 UniRef50_C9QLU9 Regulatory protein LysR:LysR substrate-binding n... 177 3e-43 UniRef50_B1KKV9 Transcriptional regulator, LysR family n=4 Tax=S... 177 3e-43 UniRef50_C5BHM7 Transcriptional regulator, LysR family n=2 Tax=E... 176 7e-43 UniRef50_A6B1R6 Transcriptional regulator n=1 Tax=Vibrio parahae... 175 2e-42 UniRef50_A7N4D7 Putative uncharacterized protein n=1 Tax=Vibrio ... 175 2e-42 UniRef50_A3XSU7 Probable transcriptional regulator SyrB n=2 Tax=... 175 3e-42 UniRef50_B5EV06 Putative transcriptional regulator, LysR family ... 173 7e-42 UniRef50_D0ZGN3 Transcriptional regulator n=2 Tax=Edwardsiella R... 172 1e-41 UniRef50_C8T378 LysR family transcriptional regulator n=1 Tax=Kl... 170 7e-41 UniRef50_Q4KE95 Transcriptional regulator, LysR family n=7 Tax=P... 169 1e-40 UniRef50_B9JIM7 Transcriptional regulator protein n=12 Tax=Prote... 169 2e-40 UniRef50_A6AYH0 Transcriptional regulator n=3 Tax=Vibrio parahae... 168 3e-40 UniRef50_A6B1R3 Transcriptional regulator, LysR family n=2 Tax=V... 167 3e-40 UniRef50_Q0SYQ0 Putative transcriptional regulator LYSR-type n=1... 167 7e-40 UniRef50_Q46WQ0 Transcriptional regulator, LysR family n=1 Tax=R... 166 8e-40 UniRef50_Q0K6D4 Transcriptional regulator, LysR-family n=2 Tax=C... 165 2e-39 UniRef50_C9PJ12 Putative transcriptional regulator protein n=1 T... 165 2e-39 UniRef50_B7X0F3 Transcriptional regulator, LysR family n=1 Tax=C... 164 3e-39 UniRef50_Q475G5 Regulatory protein, LysR:LysR, substrate-binding... 164 4e-39 UniRef50_C5B901 Transcriptional activator, LysR family n=74 Tax=... 163 6e-39 UniRef50_Q39IT2 Transcriptional regulator, LysR family n=8 Tax=B... 163 7e-39 UniRef50_Q87IK7 Putative LysR-family transcriptional regulator n... 163 8e-39 UniRef50_Q122V6 Transcriptional regulator, LysR family n=3 Tax=C... 163 1e-38 UniRef50_B8KMT5 Transcriptional regulator, LysR family n=1 Tax=g... 162 1e-38 UniRef50_A8H9U3 Transcriptional regulator, LysR family n=3 Tax=S... 162 2e-38 UniRef50_P27111 HTH-type transcriptional regulator cynR n=108 Ta... 162 2e-38 UniRef50_B5XZT9 Transcriptional regulator, LysR family n=5 Tax=K... 162 2e-38 UniRef50_B8IVL1 Transcriptional regulator, LysR family n=2 Tax=P... 162 2e-38 UniRef50_UPI00019037C9 nod transcriptional regulator protein, Ly... 162 2e-38 UniRef50_C1YJH3 Transcriptional regulator, COG0583 n=1 Tax=Nocar... 161 2e-38 UniRef50_Q0KE24 Transcriptional regulator, LysR-family n=2 Tax=C... 161 3e-38 UniRef50_A4FE82 LysR-family transcriptional regulator n=5 Tax=Ac... 160 5e-38 UniRef50_A9WGB3 LysR substrate-binding n=2 Tax=Chloroflexus RepI... 160 6e-38 UniRef50_C5BQI4 Transcriptional regulator, LysR family n=1 Tax=T... 160 7e-38 UniRef50_Q1V682 Putative transcriptional regulator protein n=1 T... 160 8e-38 UniRef50_B7VQK1 Transcriptional regulator n=3 Tax=Gammaproteobac... 160 8e-38 UniRef50_C6C982 Transcriptional regulator, LysR family n=1 Tax=D... 160 8e-38 UniRef50_B9KVK0 Transcriptional regulator, LysR family n=1 Tax=R... 159 1e-37 UniRef50_B2JVU4 Transcriptional regulator, LysR family n=43 Tax=... 159 2e-37 UniRef50_A8GGW8 Transcriptional regulator, LysR family n=39 Tax=... 158 2e-37 UniRef50_A8H1K8 Transcriptional regulator, LysR family n=2 Tax=S... 158 2e-37 UniRef50_Q2T940 Transcriptional regulator, LysR family n=6 Tax=B... 157 4e-37 UniRef50_B9KYF2 RuBisCO operon transcriptional regulator n=1 Tax... 157 6e-37 UniRef50_C8WSN1 Transcriptional regulator, LysR family n=1 Tax=A... 156 9e-37 UniRef50_A6ULR6 Transcriptional regulator, LysR family n=1 Tax=S... 156 1e-36 UniRef50_UPI0001C3192A transcriptional regulator, LysR family n=... 155 1e-36 UniRef50_Q1QYT3 Transcriptional regulator, LysR family n=1 Tax=C... 155 2e-36 UniRef50_B5XVV4 Transcriptional regulator cynR n=5 Tax=Enterobac... 155 2e-36 UniRef50_A6WDF3 Transcriptional regulator, LysR family n=1 Tax=K... 155 2e-36 UniRef50_C6CY97 Transcriptional regulator, LysR family n=1 Tax=P... 155 2e-36 UniRef50_Q4K4U2 Transcriptional regulator, LysR family n=17 Tax=... 155 2e-36 UniRef50_Q5E087 Transcriptional regulator, LysR family n=1 Tax=V... 155 2e-36 UniRef50_A0QNN2 Transcriptional regulator, LysR family protein n... 154 3e-36 UniRef50_Q826F8 Putative LysR-family transcriptional regulator n... 154 3e-36 UniRef50_Q4ZQQ6 Regulatory protein, LysR:LysR, substrate-binding... 153 7e-36 UniRef50_B6EQY4 HTH-type transcriptional regulator, LysR-family ... 153 8e-36 UniRef50_A3RV15 Transcriptional regulatory protein n=4 Tax=Ralst... 152 1e-35 UniRef50_D0Z296 Transcriptional regulator LysR family n=1 Tax=Ph... 152 1e-35 UniRef50_D0YA85 Transcriptional regulator, LysR family n=5 Tax=K... 152 2e-35 UniRef50_Q7WCW0 Probable LysR-family transcriptional regulator n... 151 2e-35 UniRef50_P77744 HTH-type transcriptional regulator abgR n=48 Tax... 151 2e-35 UniRef50_Q1YUD1 Probable transcriptional regulator n=1 Tax=gamma... 151 3e-35 UniRef50_A3TPW4 Putative transcriptional regulator n=1 Tax=Janib... 151 3e-35 UniRef50_B7V886 Probable transcriptional regulator n=7 Tax=Pseud... 151 4e-35 UniRef50_C0Z518 Transcriptional regulator n=3 Tax=Paenibacillace... 151 4e-35 UniRef50_Q7WJM8 Probable LysR-family transcriptional regulator n... 150 4e-35 UniRef50_Q32IV1 Putative transcriptional regulator LYSR-type n=1... 150 7e-35 UniRef50_A8FZC1 Transcriptional regulator-like protein n=4 Tax=S... 150 8e-35 UniRef50_C6IV95 LysR family transcriptional regulator n=4 Tax=Ba... 149 1e-34 UniRef50_P03030 Transcriptional activator protein lysR n=101 Tax... 149 1e-34 UniRef50_A1WRQ7 Transcriptional regulator, LysR family n=2 Tax=B... 149 1e-34 UniRef50_A6CUQ2 Putative transcription regulator protein n=1 Tax... 149 2e-34 UniRef50_Q0K3Z3 Transcriptional regulator, LysR-family n=1 Tax=R... 148 3e-34 UniRef50_C0CQ02 Putative uncharacterized protein n=1 Tax=Blautia... 148 3e-34 UniRef50_A6UB72 Transcriptional regulator, LysR family n=1 Tax=S... 147 3e-34 UniRef50_B4SSL0 Transcriptional regulator, LysR family n=8 Tax=X... 147 4e-34 UniRef50_B1Z4Z1 Transcriptional regulator, LysR family n=5 Tax=P... 147 5e-34 UniRef50_A1W2B9 Transcriptional regulator, LysR family n=6 Tax=C... 147 5e-34 UniRef50_UPI00016A8F80 Transcriptional regulator n=1 Tax=Burkhol... 147 6e-34 UniRef50_B9KUK0 Transcriptional regulator n=2 Tax=Rhodobacterace... 147 6e-34 UniRef50_P37499 Uncharacterized HTH-type transcriptional regulat... 147 6e-34 UniRef50_C1M9D8 Predicted protein n=2 Tax=Citrobacter RepID=C1M9... 147 7e-34 UniRef50_B5JN19 Putative uncharacterized protein n=1 Tax=Verruco... 146 1e-33 UniRef50_A9W9P6 LysR substrate-binding n=3 Tax=Chloroflexus RepI... 146 1e-33 UniRef50_Q1R0T5 Transcriptional regulator, LysR family n=2 Tax=C... 146 1e-33 UniRef50_D2P368 Transcription activator of glutamate synthase op... 146 1e-33 UniRef50_D2B6U1 DNA-binding transcriptional regulator CynR n=1 T... 145 1e-33 UniRef50_Q7WNL7 LysR-family transcriptional regulator n=1 Tax=Bo... 145 2e-33 UniRef50_A3QFK5 Transcriptional regulator, LysR family n=69 Tax=... 145 2e-33 UniRef50_A6W0Q8 Transcriptional regulator, LysR family n=2 Tax=M... 145 2e-33 UniRef50_B5JQV8 LysR substrate binding domain protein n=1 Tax=Ve... 145 2e-33 UniRef50_A6UGP0 Transcriptional regulator, LysR family n=2 Tax=S... 145 2e-33 UniRef50_A8IAC4 Transcriptional regulator n=1 Tax=Azorhizobium c... 145 3e-33 UniRef50_A3VLP1 LysR family transcriptional regulatory protein n... 144 3e-33 UniRef50_C4ZHT7 Transcription activator of glutamate synthase(Ly... 144 4e-33 UniRef50_B1Y0L4 Transcriptional regulator, LysR family n=2 Tax=B... 144 4e-33 UniRef50_A5W321 Transcriptional regulator, LysR family n=3 Tax=P... 144 4e-33 UniRef50_B2T7R4 Transcriptional regulator, LysR family n=5 Tax=B... 143 5e-33 UniRef50_B5GYU9 LysR-family transcriptional regulator (Fragment)... 143 6e-33 UniRef50_B9Z0I5 Transcriptional regulator, LysR family n=1 Tax=L... 143 6e-33 UniRef50_C5T5G2 Transcriptional regulator, LysR family n=1 Tax=A... 143 7e-33 UniRef50_B2JL76 Transcriptional regulator, LysR family n=10 Tax=... 143 7e-33 UniRef50_A6SW66 Transcriptional regulator, LysR family n=1 Tax=J... 143 7e-33 UniRef50_B9Z0M9 Transcriptional regulator, LysR family n=2 Tax=B... 143 8e-33 UniRef50_C1F7X5 Transcriptional regulator, LysR family n=1 Tax=A... 143 8e-33 UniRef50_A6VZS6 Transcriptional regulator, LysR family n=4 Tax=G... 143 8e-33 UniRef50_B5CN01 Putative uncharacterized protein n=2 Tax=Bacteri... 143 9e-33 UniRef50_B1HQK1 HTH-type transcriptional regulator n=3 Tax=Bacil... 143 1e-32 UniRef50_Q1GQE8 Transcriptional regulator, LysR family n=1 Tax=S... 143 1e-32 UniRef50_Q2NR44 Putative transcriptional regulator n=1 Tax=Sodal... 143 1e-32 UniRef50_B0KG73 Transcriptional regulator, LysR family n=7 Tax=P... 142 1e-32 UniRef50_B8K739 Transcriptional regulator, substrate-binding of ... 142 1e-32 UniRef50_UPI0000E0F9F3 Transcriptional Regulator, LysR family pr... 142 1e-32 UniRef50_C6W9R3 Transcriptional regulator, LysR family n=1 Tax=A... 142 1e-32 UniRef50_Q2GAY9 Transcriptional regulator, LysR family n=1 Tax=N... 142 1e-32 UniRef50_B0TCS4 Transcriptional regulator, lysr family n=2 Tax=F... 142 1e-32 UniRef50_A8TZA8 Transcriptional regulator, LysR family protein n... 142 2e-32 UniRef50_A4ISN4 Transcriptional regulator LysR family n=6 Tax=Ge... 142 2e-32 UniRef50_Q12AP3 Transcriptional regulator, LysR family n=4 Tax=B... 142 2e-32 UniRef50_A9WIA6 LysR substrate-binding n=4 Tax=Chloroflexaceae R... 142 2e-32 UniRef50_UPI00016C47B2 transcriptional regulator, LysR family pr... 142 2e-32 UniRef50_C4Z2A4 LysR family transcriptional regulator, transcrip... 142 2e-32 UniRef50_B9QYV9 LysR substrate binding domain protein n=1 Tax=La... 141 3e-32 UniRef50_C2BX95 Transcriptional regulator n=1 Tax=Listeria grayi... 141 3e-32 UniRef50_Q4ZRN4 Regulatory protein, LysR:LysR, substrate-binding... 141 3e-32 UniRef50_B0TNB6 Transcriptional regulator, LysR family n=19 Tax=... 141 3e-32 UniRef50_P39592 Uncharacterized HTH-type transcriptional regulat... 141 3e-32 UniRef50_B7RZY7 LysR substrate binding domain protein n=1 Tax=ma... 140 5e-32 UniRef50_Q7N4W1 Hca operon transcriptional activator n=2 Tax=Pho... 140 5e-32 UniRef50_A8G141 Transcriptional regulator, LysR family n=9 Tax=S... 140 5e-32 UniRef50_C8WRL7 Transcriptional regulator, LysR family n=2 Tax=A... 140 6e-32 UniRef50_C0VZJ2 Oxidative stress transcriptional regulator n=1 T... 140 6e-32 UniRef50_A9WDF5 LysR substrate-binding n=3 Tax=Chloroflexus RepI... 140 7e-32 UniRef50_Q2J7C4 Transcriptional regulator, LysR family n=22 Tax=... 140 7e-32 UniRef50_D2D3B5 FumC n=1 Tax=Sphingopyxis macrogoltabida RepID=D... 140 7e-32 UniRef50_A1TN88 Transcriptional regulator, LysR family n=9 Tax=B... 140 7e-32 UniRef50_Q65GU9 Transcriptional regulator YbbE n=2 Tax=Bacillus ... 140 8e-32 UniRef50_P0ACR7 Uncharacterized HTH-type transcriptional regulat... 140 8e-32 UniRef50_Q1LFI3 Transcriptional regulator, LysR family n=1 Tax=C... 140 8e-32 UniRef50_D1XD01 Transcriptional regulator, LysR family n=1 Tax=S... 140 9e-32 UniRef50_A6T102 Transcriptional regulator, LysR family n=1 Tax=J... 140 9e-32 UniRef50_B2T513 Transcriptional regulator, LysR family n=65 Tax=... 139 9e-32 UniRef50_B4SSK9 Transcriptional regulator, LysR family n=3 Tax=S... 139 1e-31 UniRef50_P0ACR6 Uncharacterized HTH-type transcriptional regulat... 139 1e-31 UniRef50_C5ALH3 Transcriptional regulator, LysR family protein n... 139 1e-31 UniRef50_D0Z9H4 Transcriptional regulator, LysR family n=40 Tax=... 139 1e-31 UniRef50_C5CPN7 Transcriptional regulator, LysR family n=1 Tax=V... 139 1e-31 UniRef50_Q67KY5 LysR family transcriptional regulator n=1 Tax=Sy... 139 1e-31 UniRef50_Q47141 Hca operon transcriptional activator n=46 Tax=Ga... 139 1e-31 UniRef50_D1BJH1 Transcriptional regulator n=2 Tax=Actinomycetale... 139 1e-31 UniRef50_P52696 Uncharacterized HTH-type transcriptional regulat... 139 1e-31 UniRef50_Q5NYN4 Transcriptional regulator n=4 Tax=Rhodocyclaceae... 139 2e-31 UniRef50_D1REM2 Putative LysR family transcriptional regulator n... 138 2e-31 UniRef50_C7H9N7 Transcriptional regulator, LysR family n=2 Tax=F... 138 2e-31 UniRef50_D1PPF0 Transcriptional regulator, LysR family n=1 Tax=S... 138 2e-31 UniRef50_C7I3E5 Transcriptional regulator, LysR family n=1 Tax=T... 138 2e-31 UniRef50_A1BBY8 Transcriptional regulator, LysR family n=1 Tax=P... 138 2e-31 UniRef50_A3I8L6 Transcriptional regulator, LysR family protein n... 138 2e-31 UniRef50_Q97DV9 Transcriptional regulator, LysR family n=1 Tax=C... 138 2e-31 UniRef50_C1XNG0 Transcriptional regulator, COG0583 n=2 Tax=Meiot... 138 2e-31 UniRef50_C6D0W9 Transcriptional regulator, LysR family n=1 Tax=P... 138 3e-31 UniRef50_C4DFU1 Transcriptional regulator, COG0583 n=1 Tax=Stack... 138 3e-31 UniRef50_UPI000174499E transcriptional regulatory protein, LysR ... 138 3e-31 UniRef50_B8G0C5 Transcriptional regulator, LysR family n=2 Tax=D... 138 3e-31 UniRef50_C1XGE6 Transcriptional regulator, COG0583 n=2 Tax=Meiot... 138 3e-31 UniRef50_Q0S205 Transcriptional regulator, LysR family protein n... 138 3e-31 UniRef50_A0JW92 Transcriptional regulator, LysR family n=3 Tax=M... 138 3e-31 UniRef50_Q0A8N9 Transcriptional regulator, LysR family n=4 Tax=G... 138 3e-31 UniRef50_A0AXF9 Transcriptional regulator, LysR family n=9 Tax=B... 138 3e-31 UniRef50_C1DGS2 Transcriptinal regulator, LysR family n=1 Tax=Az... 138 3e-31 UniRef50_D0I933 Putative transcriptional regulatory protein LysR... 138 3e-31 UniRef50_O67145 Transcriptional regulator (LysR family) n=2 Tax=... 138 3e-31 UniRef50_D0J615 Transcriptional regulator, LysR family n=2 Tax=C... 137 4e-31 UniRef50_B9JE08 Transcriptional regulator protein n=11 Tax=Rhizo... 137 4e-31 UniRef50_UPI0001788193 transcriptional regulator, LysR family n=... 137 4e-31 UniRef50_Q5WL22 LysR family transcriptional regulator n=2 Tax=Ba... 137 4e-31 UniRef50_Q127N6 Transcriptional regulator, LysR family n=1 Tax=P... 137 4e-31 UniRef50_A8LT79 Transcriptional regulator n=1 Tax=Dinoroseobacte... 137 4e-31 UniRef50_A9VF88 Transcriptional regulator, LysR family n=77 Tax=... 137 4e-31 UniRef50_D0J3K7 Transcriptional regulator, LysR family n=3 Tax=C... 137 4e-31 UniRef50_Q28M96 Transcriptional regulator, LysR family n=3 Tax=R... 137 5e-31 UniRef50_A8GI93 Transcriptional regulator, LysR family n=3 Tax=E... 137 5e-31 UniRef50_Q1IRM1 Transcriptional regulator, LysR family n=1 Tax=C... 137 5e-31 UniRef50_Q4ZY05 Regulatory protein, LysR:LysR, substrate-binding... 137 5e-31 UniRef50_C4L1Y9 Transcriptional regulator, LysR family n=2 Tax=E... 137 5e-31 UniRef50_B5EGJ2 Transcriptional regulator, LysR family n=5 Tax=G... 137 5e-31 UniRef50_A3K7Z5 Regulatory protein, LysR:LysR, substrate-binding... 137 5e-31 UniRef50_A1BA89 Transcriptional regulator, LysR family n=4 Tax=A... 137 5e-31 UniRef50_B1M0B1 Transcriptional regulator, LysR family n=24 Tax=... 137 5e-31 UniRef50_B9JGZ8 Transcriptional regulator (Activator) protein n=... 137 6e-31 UniRef50_B8IW67 Transcriptional regulator, LysR family n=1 Tax=M... 137 6e-31 UniRef50_Q47TZ7 Putative LysR-family transcriptional regulator n... 137 6e-31 UniRef50_P20668 HTH-type transcriptional regulator gltC n=17 Tax... 137 6e-31 UniRef50_A6CZZ4 Putative transcription regulator protein n=2 Tax... 137 6e-31 UniRef50_D2BU12 Transcriptional regulator, LysR family n=13 Tax=... 137 7e-31 UniRef50_D2TGJ2 Putative LysR-family transcriptional regulator n... 137 7e-31 UniRef50_Q1GMF7 Transcriptional regulator, LysR family n=1 Tax=R... 136 9e-31 UniRef50_A8FQL0 Transcriptional regulator, LysR family n=5 Tax=S... 136 9e-31 UniRef50_C1PEC2 Transcriptional regulator, LysR family n=1 Tax=B... 136 9e-31 UniRef50_C3BJ72 YwqM (Probable transcriptional regulator YwqM) n... 136 9e-31 UniRef50_A7ZNW2 Transcriptional regulator, LysR family n=40 Tax=... 136 9e-31 UniRef50_B7IPY3 Transcriptional regulator, LysR family n=74 Tax=... 136 1e-30 UniRef50_A8SVR7 Putative uncharacterized protein n=2 Tax=Clostri... 136 1e-30 UniRef50_B9TDR3 HTH-type transcriptional regulator xapR, putativ... 136 1e-30 UniRef50_Q394W2 Transcriptional regulator, LysR family n=10 Tax=... 136 1e-30 UniRef50_P52661 HTH-type transcriptional regulator gbpR n=1 Tax=... 136 1e-30 UniRef50_B0T3V7 Transcriptional regulator, LysR family n=1 Tax=C... 136 1e-30 UniRef50_C7QGK1 Transcriptional regulator, LysR family n=1 Tax=C... 136 1e-30 UniRef50_C3JGQ8 LysR-family transcriptional regulator n=2 Tax=Rh... 136 1e-30 UniRef50_C1DSG7 Transcriptional regulator, LysR family n=1 Tax=A... 136 1e-30 UniRef50_Q46MR5 Transcriptional regulator, LysR family n=1 Tax=R... 136 1e-30 UniRef50_C4DMI0 Transcriptional regulator, COG0583 n=2 Tax=Actin... 136 1e-30 UniRef50_B8GM38 LysR family transcriptional regulator n=4 Tax=Pr... 135 1e-30 UniRef50_C6B6X6 Transcriptional regulator, LysR family n=1 Tax=R... 135 1e-30 UniRef50_A6X7A0 Transcriptional regulator, LysR family n=1 Tax=O... 135 1e-30 UniRef50_D2YFW7 Putative uncharacterized protein n=1 Tax=Vibrio ... 135 1e-30 UniRef50_Q46SX0 Transcriptional regulator, LysR family n=4 Tax=B... 135 1e-30 UniRef50_B7X3R9 Transcriptional regulator, LysR family n=1 Tax=C... 135 1e-30 UniRef50_C7PZR8 Transcriptional regulator, LysR family n=1 Tax=C... 135 2e-30 UniRef50_A6W1X7 Transcriptional regulator, LysR family n=1 Tax=M... 135 2e-30 UniRef50_B2I357 Transcriptional regulator n=14 Tax=Moraxellaceae... 135 2e-30 UniRef50_B1J741 Transcriptional regulator, LysR family n=4 Tax=P... 135 2e-30 UniRef50_Q7W108 Probable LysR-family transcriptional regulator n... 135 2e-30 UniRef50_UPI0001745DD5 transcriptional regulator, LysR family pr... 135 2e-30 UniRef50_B1Z1E9 Transcriptional regulator, LysR family n=50 Tax=... 135 2e-30 UniRef50_C7PVI0 Transcriptional regulator, LysR family n=11 Tax=... 135 2e-30 UniRef50_A4J6T9 Transcriptional regulator, LysR family n=1 Tax=D... 135 2e-30 UniRef50_C9KJ25 Transcriptional regulator GltC n=1 Tax=Mitsuokel... 135 2e-30 UniRef50_A4F7Y9 Transcriptional regulator, LysR family n=3 Tax=A... 135 2e-30 UniRef50_A7NQH4 Transcriptional regulator, LysR family n=2 Tax=R... 135 2e-30 UniRef50_C6D5Q8 Transcriptional regulator, LysR family n=1 Tax=P... 135 2e-30 UniRef50_A0KPQ5 Transcriptional regulator n=1 Tax=Aeromonas hydr... 135 2e-30 UniRef50_B8IDW8 Transcriptional regulator, LysR family n=1 Tax=M... 135 3e-30 UniRef50_Q67SW7 LysR family transcriptional regulator n=1 Tax=Sy... 135 3e-30 UniRef50_B2UBD9 Transcriptional regulator, LysR family n=8 Tax=B... 135 3e-30 UniRef50_B5G8L5 Transcriptional regulator n=3 Tax=Actinomycetale... 135 3e-30 UniRef50_A9C0Y6 Transcriptional regulator, LysR family n=1 Tax=D... 135 3e-30 UniRef50_Q7W708 Putative LysR-family transcriptional regulator n... 135 3e-30 UniRef50_A6F002 Transcriptional regulator, LysR family protein n... 135 3e-30 UniRef50_Q1QWP3 Transcriptional regulator, LysR family n=1 Tax=C... 134 3e-30 UniRef50_B0N992 Putative uncharacterized protein n=2 Tax=Clostri... 134 3e-30 UniRef50_A8I2X1 Putative transcriptional regulator n=1 Tax=Azorh... 134 3e-30 UniRef50_Q46Q42 Regulatory protein, LysR:LysR, substrate-binding... 134 3e-30 UniRef50_C0D867 Putative uncharacterized protein n=1 Tax=Clostri... 134 3e-30 UniRef50_C0ZCK2 Transcriptional regulator n=1 Tax=Brevibacillus ... 134 3e-30 UniRef50_Q11H84 Transcriptional regulator, LysR family n=1 Tax=C... 134 4e-30 UniRef50_Q46R60 Regulatory protein, LysR:LysR, substrate-binding... 134 4e-30 UniRef50_B6R6F6 Transcriptional regulator, LysR family n=1 Tax=P... 134 4e-30 UniRef50_UPI00016945AE hypothetical protein Plarl_07755 n=1 Tax=... 134 4e-30 UniRef50_C5D1A4 Transcriptional regulator, LysR family n=1 Tax=V... 134 4e-30 UniRef50_A5G2D8 Transcriptional regulator, LysR family n=1 Tax=A... 134 4e-30 UniRef50_Q46MA3 Transcriptional regulator, LysR family n=1 Tax=R... 134 4e-30 UniRef50_A0QCY6 Transcriptional regulator, LysR family protein n... 134 4e-30 UniRef50_B2HU56 Transcriptional regulator n=17 Tax=Acinetobacter... 134 5e-30 UniRef50_A6VX33 Transcriptional regulator, LysR family n=2 Tax=M... 134 5e-30 UniRef50_Q2KXE7 LysR-family transcriptional regulator n=3 Tax=Bo... 134 5e-30 UniRef50_B8IJK2 Transcriptional regulator, LysR family n=1 Tax=M... 134 5e-30 UniRef50_Q31FC6 Transcriptional regulator, LysR family n=7 Tax=P... 134 5e-30 UniRef50_C0F0J2 Putative uncharacterized protein n=1 Tax=Eubacte... 134 5e-30 UniRef50_B1M8N3 Transcriptional regulator, LysR family n=35 Tax=... 133 5e-30 UniRef50_D2PY57 Transcriptional regulator, LysR family n=3 Tax=A... 133 5e-30 UniRef50_C6CYG5 Transcriptional regulator, LysR family n=2 Tax=P... 133 5e-30 UniRef50_Q04778 HTH-type transcriptional regulator alsR n=87 Tax... 133 6e-30 UniRef50_Q7WC66 LysR-family transcriptional regulator n=3 Tax=Bo... 133 6e-30 UniRef50_Q67PU0 LysR family transcriptional regulator n=1 Tax=Sy... 133 6e-30 UniRef50_Q47P44 Putative LysR-family transcriptional regulator n... 133 6e-30 UniRef50_D1VD43 Transcriptional regulator, LysR family n=1 Tax=F... 133 6e-30 UniRef50_Q7NKC0 Nitrogen assimilation transcriptional activator ... 133 7e-30 UniRef50_B0UFX9 Transcriptional regulator, LysR family n=1 Tax=M... 133 7e-30 UniRef50_A3VL76 Putative LysR-family transcriptional regulator n... 133 7e-30 UniRef50_C6XSY8 LysR substrate-binding n=12 Tax=Bacteroidetes Re... 133 7e-30 UniRef50_A3U1I2 Regulatory protein, LysR:LysR, substrate-binding... 133 7e-30 UniRef50_A4T9R9 Transcriptional regulator, LysR family n=8 Tax=C... 133 7e-30 UniRef50_A9BXG3 Transcriptional regulator, LysR family n=218 Tax... 133 7e-30 UniRef50_Q0JZR1 Transcriptional regulator, LysR-family n=8 Tax=P... 133 7e-30 UniRef50_A6SXB4 Transcriptional regulator, LysR family n=1 Tax=J... 133 7e-30 UniRef50_Q1N6N4 Transcriptional regulator, LysR family protein n... 133 7e-30 UniRef50_C4U8I2 LysR-family transcriptional regulatory protein n... 133 8e-30 UniRef50_Q46P28 Transcriptional regulator, LysR family n=1 Tax=R... 133 8e-30 UniRef50_C6VMS1 Transcription regulator n=11 Tax=Firmicutes RepI... 133 8e-30 UniRef50_C5BEX8 Transcriptional regulator, LysR family n=12 Tax=... 133 8e-30 UniRef50_O68014 HTH-type transcriptional regulator benM n=12 Tax... 133 8e-30 UniRef50_Q5FUF1 Transcriptional regulator n=2 Tax=Acetobacterace... 133 9e-30 UniRef50_C9LCS7 Putative transcriptional regulator n=1 Tax=Blaut... 133 9e-30 UniRef50_A4F849 LysR-family transcriptional regulator n=7 Tax=Ac... 133 1e-29 UniRef50_A3NGA2 Transcriptional regulator n=70 Tax=Proteobacteri... 133 1e-29 UniRef50_A1WHL2 Transcriptional regulator, LysR family n=10 Tax=... 133 1e-29 UniRef50_Q13G76 Transcriptional regulator, LysR family n=1 Tax=B... 133 1e-29 UniRef50_Q0C276 Transcriptional regulator, LysR family n=1 Tax=H... 133 1e-29 UniRef50_C6XZC9 LysR substrate-binding n=1 Tax=Pedobacter hepari... 133 1e-29 UniRef50_C5CTK1 Transcriptional regulator, LysR family n=1 Tax=V... 132 1e-29 UniRef50_Q98A96 Nitrogen assimilation control protein n=3 Tax=Me... 132 1e-29 UniRef50_C1A9Z7 LysR family transcriptional regulator n=1 Tax=Ge... 132 1e-29 UniRef50_B5I3M3 Transcriptional regulator n=1 Tax=Streptomyces s... 132 1e-29 UniRef50_Q7WNL3 LysR-family transcriptional regulator n=1 Tax=Bo... 132 1e-29 UniRef50_C0ADM3 DNA-binding transcriptional regulator CynR n=2 T... 132 1e-29 UniRef50_C4KR89 Transcriptional regulator, LysR family n=67 Tax=... 132 1e-29 UniRef50_Q1R0R5 Transcriptional regulator, LysR family n=1 Tax=C... 132 1e-29 UniRef50_A6WFB8 Transcriptional regulator, LysR family n=1 Tax=K... 132 1e-29 UniRef50_UPI0001C36FDC transcriptional regulator, LysR family pr... 132 1e-29 UniRef50_B2I0F8 Transcriptional regulator n=13 Tax=Acinetobacter... 132 1e-29 UniRef50_A1TIM2 Transcriptional regulator, LysR family n=2 Tax=A... 132 2e-29 UniRef50_C9YBM2 Putative uncharacterized protein n=2 Tax=cellula... 132 2e-29 UniRef50_B8CT07 Regulatory protein, LysR n=1 Tax=Shewanella piez... 132 2e-29 UniRef50_C9PFK4 Transcriptional regulator substrate-binding of L... 132 2e-29 UniRef50_A8FC52 LysR family transcriptional regulator n=4 Tax=Ba... 132 2e-29 UniRef50_B0TM59 Transcriptional regulator, LysR family n=2 Tax=S... 132 2e-29 UniRef50_Q67NJ1 LysR family transcriptional regulator n=1 Tax=Sy... 132 2e-29 UniRef50_A0R7B5 LysR-family protein transcriptional regulator n=... 132 2e-29 UniRef50_B7J6H8 Transcriptional regulator, LysR family n=3 Tax=A... 132 2e-29 UniRef50_D1BNW2 Transcriptional regulator, LysR family n=4 Tax=V... 132 2e-29 UniRef50_A3QI10 Transcriptional regulator, LysR family n=2 Tax=S... 132 2e-29 UniRef50_C4V352 LysR family transcriptional regulator n=2 Tax=Se... 132 2e-29 UniRef50_B1K332 Transcriptional regulator, LysR family n=6 Tax=B... 132 2e-29 UniRef50_Q67TA2 LysR family transcriptional regulator n=1 Tax=Sy... 132 2e-29 UniRef50_Q0K1W4 Transcriptional regulator (Transcriptional regul... 132 2e-29 UniRef50_C1M4D9 Putative uncharacterized protein n=2 Tax=Citroba... 132 2e-29 UniRef50_C5AK02 Transcriptional regulator, LysR family protein n... 132 2e-29 UniRef50_C9ABQ3 Transcriptional regulator n=1 Tax=Enterococcus c... 132 2e-29 UniRef50_Q3AG49 Transcriptional regulator, LysR family n=1 Tax=C... 132 2e-29 UniRef50_A9ANZ9 LysR family transcriptional regulator n=21 Tax=c... 132 2e-29 UniRef50_Q481E9 Transcriptional regulator, LysR family n=1 Tax=C... 132 2e-29 UniRef50_O32255 Uncharacterized HTH-type transcriptional regulat... 132 2e-29 UniRef50_UPI0001B4610F LysR family transcriptional regulator n=1... 131 3e-29 UniRef50_A0QTM3 HTH-type transcriptional regulator AlsR n=7 Tax=... 131 3e-29 UniRef50_B0KIN0 Transcriptional regulator, LysR family n=20 Tax=... 131 3e-29 UniRef50_A7JZ93 Transcriptional regulator, LysR family protein n... 131 3e-29 UniRef50_C0ZI27 Transcriptional regulator n=1 Tax=Brevibacillus ... 131 3e-29 UniRef50_Q0RY04 Transcriptional regulator, LysR family protein n... 131 3e-29 UniRef50_Q13GE5 Transcriptional regulator, LysR family n=1 Tax=B... 131 3e-29 UniRef50_C4ZIH4 Transcriptional regulator, LysR family n=1 Tax=T... 131 3e-29 UniRef50_C6CM82 Transcriptional regulator, LysR family n=6 Tax=E... 131 3e-29 UniRef50_A1SY80 Transcriptional regulator, LysR family n=1 Tax=P... 131 3e-29 UniRef50_A0AYH9 Transcriptional regulator, LysR family n=148 Tax... 131 3e-29 UniRef50_C8X447 Transcriptional regulator, LysR family n=1 Tax=D... 131 3e-29 UniRef50_B6AZI7 Transcriptional regulator, LysR family n=1 Tax=R... 131 3e-29 UniRef50_Q2GAY5 Transcriptional regulator, LysR family n=1 Tax=N... 131 3e-29 UniRef50_Q2JIR1 Transcriptional regulator, LysR family n=2 Tax=S... 131 3e-29 UniRef50_A0L2B3 Transcriptional regulator, LysR family n=9 Tax=S... 131 3e-29 UniRef50_Q1YFP6 Putative pca operon transcription factor PcaQ n=... 131 3e-29 UniRef50_Q46S80 Transcriptional regulator, LysR family n=4 Tax=C... 131 3e-29 UniRef50_Q0RL92 Putative uncharacterized protein n=1 Tax=Frankia... 131 3e-29 UniRef50_C1B6M2 Putative LysR family transcriptional regulator n... 131 3e-29 UniRef50_B4WIK9 LysR substrate binding domain protein n=1 Tax=Sy... 131 4e-29 UniRef50_A7ZAS3 YybE n=1 Tax=Bacillus amyloliquefaciens FZB42 Re... 131 4e-29 UniRef50_D1ABG1 Transcriptional regulator, MarR family n=2 Tax=S... 131 4e-29 UniRef50_D2B2W6 Transcriptional regulator, LysR family n=17 Tax=... 131 4e-29 UniRef50_Q1D8H0 Transcriptional regulator, LysR family n=2 Tax=C... 131 4e-29 UniRef50_A1WN33 Transcriptional regulator, LysR family n=1 Tax=V... 131 4e-29 UniRef50_Q15NZ1 Transcriptional regulator, LysR family n=2 Tax=G... 131 4e-29 UniRef50_A6GF05 Transcriptional Regulator, LysR family protein n... 131 4e-29 UniRef50_Q1AUB8 Transcriptional regulator, LysR family n=2 Tax=B... 130 4e-29 UniRef50_C0WB23 Transcriptional regulator n=1 Tax=Acidaminococcu... 130 5e-29 UniRef50_B8IWD6 Transcriptional regulator, LysR family n=1 Tax=M... 130 5e-29 UniRef50_B7RS92 Regulatory protein, LysR:LysR, substrate-binding... 130 5e-29 UniRef50_C0Z7P7 Probable transcriptional regulator n=1 Tax=Brevi... 130 5e-29 UniRef50_B6R5Q8 Transcriptional regulator, LysR family n=1 Tax=P... 130 5e-29 UniRef50_Q2W289 Transcriptional regulator n=2 Tax=Magnetospirill... 130 5e-29 UniRef50_UPI0001C30F27 transcriptional regulator, LysR family n=... 130 5e-29 UniRef50_C6J455 LysR family transcriptional regulator n=2 Tax=Ba... 130 5e-29 UniRef50_B1KBR5 Transcriptional regulator, LysR family n=11 Tax=... 130 5e-29 UniRef50_Q126R0 Transcriptional regulator, LysR family n=10 Tax=... 130 5e-29 UniRef50_C8WUA0 Transcriptional regulator, LysR family n=1 Tax=A... 130 5e-29 UniRef50_Q2T4U0 Transcriptional regulator, LysR family n=2 Tax=B... 130 5e-29 UniRef50_A5V773 Transcriptional regulator, LysR family n=2 Tax=A... 130 6e-29 UniRef50_B1ZUQ0 Transcriptional regulator, LysR family n=1 Tax=O... 130 6e-29 UniRef50_A3VLR4 Putative LysR family transcriptional regulator n... 130 6e-29 UniRef50_A6VV39 Transcriptional regulator, LysR family n=6 Tax=G... 130 6e-29 UniRef50_A5WE98 Transcriptional regulator, LysR family n=2 Tax=P... 130 7e-29 UniRef50_Q3K9B5 Putative LysR family transcriptional regulator n... 130 7e-29 UniRef50_P25544 RuBisCO operon transcriptional regulator n=13 Ta... 130 7e-29 UniRef50_Q7W2V9 Putative LysR-family transcriptional regulator n... 130 7e-29 UniRef50_Q160L3 Transcriptional regulator, LysR family, putative... 130 7e-29 UniRef50_Q2NZJ9 Transcriptional regulator n=9 Tax=Xanthomonas Re... 130 7e-29 UniRef50_A7ZAT2 Putative HTH-type transcriptional regulator n=2 ... 130 7e-29 UniRef50_D1WWA8 Transcriptional regulator, LysR family n=7 Tax=S... 130 8e-29 UniRef50_Q7W6T4 Putative lysR-family transcriptional regulator n... 130 8e-29 UniRef50_A5G0H6 Transcriptional regulator, LysR family n=1 Tax=A... 130 8e-29 UniRef50_A4TSA2 Transcriptional regulator n=23 Tax=Enterobacteri... 130 8e-29 UniRef50_Q7WLJ5 LysR-family transcriptional regulator n=3 Tax=Bo... 130 8e-29 UniRef50_Q5WBL7 LysR family transcriptional regulator n=3 Tax=Ba... 130 8e-29 UniRef50_Q8TVB0 Transcriptional regulator of the LysR family n=1... 130 9e-29 UniRef50_O33945 Probable cat1 operon transcriptional activator n... 130 9e-29 UniRef50_A0R3Z8 Transcriptional regulator, LysR family protein n... 130 9e-29 UniRef50_B7AVQ3 Putative uncharacterized protein n=1 Tax=Bactero... 130 9e-29 UniRef50_B7RZD5 LysR substrate binding domain protein n=1 Tax=ma... 130 9e-29 UniRef50_B8GVI8 Transcriptional regulator, LysR family n=2 Tax=C... 130 9e-29 UniRef50_Q7WNE4 LysR-family transcriptional regulator n=1 Tax=Bo... 130 9e-29 UniRef50_Q21IY2 Transcriptional regulator, LysR family n=2 Tax=G... 129 1e-28 UniRef50_P73123 Probable RuBisCO transcriptional regulator n=81 ... 129 1e-28 UniRef50_Q6W1G3 Putative transcriptional regulator LysR n=1 Tax=... 129 1e-28 UniRef50_C3LMU4 Transcriptional regulator, LysR family n=65 Tax=... 129 1e-28 UniRef50_D1PWM9 HTH_1 family transcriptional regulator n=4 Tax=P... 129 1e-28 UniRef50_D2QVQ4 Transcriptional regulator, LysR family n=22 Tax=... 129 1e-28 UniRef50_B1J1Q5 Transcriptional regulator, LysR family n=21 Tax=... 129 1e-28 UniRef50_A8GER4 Transcriptional regulator, LysR family n=2 Tax=S... 129 1e-28 UniRef50_Q478C5 Transcriptional regulator, LysR family n=2 Tax=B... 129 1e-28 UniRef50_Q1GJ71 Transcriptional regulator, LysR family n=1 Tax=R... 129 1e-28 UniRef50_Q1IHL3 Transcriptional regulator, LysR family n=1 Tax=C... 129 1e-28 UniRef50_Q126X0 Transcriptional regulator, LysR family n=4 Tax=P... 129 1e-28 UniRef50_UPI00004DBCAD UPI00004DBCAD related cluster n=2 Tax=Xen... 129 1e-28 UniRef50_Q7NCX0 LysR family transcriptional regulatory protein n... 129 1e-28 UniRef50_C1TQZ9 Transcriptional regulator, COG0583 n=1 Tax=Dethi... 129 1e-28 UniRef50_B8G0G9 Transcriptional regulator, LysR family n=2 Tax=D... 129 1e-28 UniRef50_Q0MRI6 Putative transcriptional regulator protein (Frag... 129 1e-28 UniRef50_A7MIK1 Putative uncharacterized protein n=2 Tax=Cronoba... 129 1e-28 UniRef50_B1G558 Transcriptional regulator, LysR family n=1 Tax=B... 129 1e-28 UniRef50_B0RYQ5 Transcriptional regulator, LysR family n=11 Tax=... 129 1e-28 UniRef50_A1W235 Transcriptional regulator, LysR family n=6 Tax=B... 129 1e-28 UniRef50_D1XD48 Transcriptional regulator, LysR family n=2 Tax=S... 129 1e-28 UniRef50_B9ZP87 Transcriptional regulator, LysR family n=1 Tax=T... 129 1e-28 UniRef50_A4BHD6 Transcriptional regulator lysR family protein n=... 129 1e-28 UniRef50_Q46NS6 Transcriptional regulator, LysR family n=6 Tax=B... 129 1e-28 UniRef50_C6VMR5 Transcription regulator n=5 Tax=Lactobacillus Re... 129 1e-28 UniRef50_A0KPM6 Transcriptional regulator, LysR family n=2 Tax=G... 129 1e-28 UniRef50_Q1GLW4 Transcriptional regulator, LysR family n=5 Tax=R... 129 2e-28 UniRef50_C6CZP2 Transcriptional regulator, LysR family n=5 Tax=c... 129 2e-28 UniRef50_C3KMF5 Transcriptional regulator, LysR family n=42 Tax=... 129 2e-28 UniRef50_C0ZVG6 Putative LysR family transcriptional regulator n... 128 2e-28 UniRef50_A9B3V4 Transcriptional regulator, LysR family n=1 Tax=H... 128 2e-28 UniRef50_Q9F1R2 HTH-type transcriptional activator cmpR n=38 Tax... 128 2e-28 UniRef50_B4ETA7 LysR-family transciptional regulator n=37 Tax=En... 128 2e-28 UniRef50_Q025Z5 Transcriptional regulator, LysR family n=1 Tax=C... 128 2e-28 UniRef50_D0IWI0 Transcriptional regulator, LysR family n=3 Tax=C... 128 2e-28 UniRef50_B1JQ91 Transcriptional regulator, LysR family n=11 Tax=... 128 2e-28 UniRef50_B6IX78 Hydrogen peroxide-inducible genes activator n=1 ... 128 2e-28 UniRef50_B4WMZ4 Putative uncharacterized protein n=1 Tax=Synecho... 128 2e-28 UniRef50_B9Y467 Putative uncharacterized protein n=1 Tax=Holdema... 128 2e-28 UniRef50_C0BJQ2 Transcriptional regulator, LysR family n=1 Tax=F... 128 2e-28 UniRef50_A0K8T5 Transcriptional regulator, LysR family n=55 Tax=... 128 2e-28 UniRef50_C6PMR8 Transcriptional regulator, LysR family n=1 Tax=C... 128 2e-28 UniRef50_B9K1U5 Transcriptional regulator LysR family n=59 Tax=A... 128 2e-28 UniRef50_B1J8H5 Transcriptional regulator, LysR family n=5 Tax=P... 128 2e-28 UniRef50_A9BVL3 Transcriptional regulator, LysR family n=3 Tax=C... 128 2e-28 UniRef50_Q12CT6 Transcriptional regulator, LysR family n=1 Tax=P... 128 2e-28 UniRef50_C8W2B6 Transcriptional regulator, LysR family n=1 Tax=D... 128 2e-28 UniRef50_Q0S8J9 Transcriptional regulator, LysR family protein n... 128 2e-28 UniRef50_Q76CA8 Putative LysR-type regulator n=1 Tax=Bordetella ... 128 2e-28 UniRef50_Q7W5Y3 LysR-type transcriptional regulator n=3 Tax=Bord... 128 2e-28 UniRef50_B5EPL1 Transcriptional regulator, LysR family n=2 Tax=A... 128 2e-28 UniRef50_B7RS97 Transcriptional regulator, LysR family n=1 Tax=R... 128 2e-28 UniRef50_C6B9B6 Transcriptional regulator, LysR family n=1 Tax=R... 128 2e-28 UniRef50_Q483I4 Transcriptional regulator, LysR family n=1 Tax=C... 128 2e-28 UniRef50_C5BE75 HTH-type transcriptional regulator PecT n=26 Tax... 128 3e-28 UniRef50_B2T4S2 Transcriptional regulator, LysR family n=18 Tax=... 128 3e-28 UniRef50_UPI0001BCF0E5 transcriptional regulator n=1 Tax=Selenom... 128 3e-28 UniRef50_C7I2X4 Transcriptional regulator, LysR family n=1 Tax=T... 128 3e-28 UniRef50_A6TWD6 Transcriptional regulator, LysR family n=1 Tax=A... 128 3e-28 UniRef50_Q0FTS9 Transcriptional regulatory protein n=1 Tax=Roseo... 128 3e-28 UniRef50_Q21B31 Transcriptional regulator, LysR family n=2 Tax=A... 128 3e-28 UniRef50_Q2G7Q5 Transcriptional regulator, LysR family n=1 Tax=N... 128 3e-28 UniRef50_C0CT29 Putative uncharacterized protein n=1 Tax=Clostri... 128 3e-28 UniRef50_A9KQ85 Transcriptional regulator, LysR family n=9 Tax=B... 128 3e-28 UniRef50_A5W561 Transcriptional regulator, LysR family n=12 Tax=... 128 3e-28 UniRef50_C3KNJ1 Putative transcriptional regulator, LysR-type n=... 128 3e-28 UniRef50_B2JUD8 Transcriptional regulator, LysR family n=12 Tax=... 128 3e-28 UniRef50_D1PCH2 Transcriptional regulator, LysR family n=10 Tax=... 128 3e-28 UniRef50_Q1GX89 Transcriptional regulator, LysR family n=13 Tax=... 128 3e-28 UniRef50_A8FJ94 Possible LysR family transcriptional regulator n... 128 3e-28 UniRef50_A8FAL6 LysR family transcriptional regulator n=10 Tax=B... 128 3e-28 UniRef50_A1B7R5 Transcriptional regulator, LysR family n=10 Tax=... 128 3e-28 UniRef50_B9P823 Predicted protein n=7 Tax=cellular organisms Rep... 128 3e-28 UniRef50_Q1AVK2 Transcriptional regulator, LysR family n=1 Tax=R... 128 3e-28 UniRef50_Q3SGH4 Oxidative stress transcriptional regulator n=2 T... 128 3e-28 UniRef50_B9X9V4 Transcriptional regulator, LysR family n=1 Tax=b... 128 3e-28 UniRef50_Q1J2L5 Transcriptional regulator, LysR family n=2 Tax=D... 128 3e-28 UniRef50_C5BAY1 Transcriptional regulator, LysR family n=2 Tax=E... 128 3e-28 UniRef50_Q31IK2 Transcriptional regulator, LysR family n=2 Tax=P... 128 3e-28 UniRef50_C0ZC24 Transcriptional regulator n=1 Tax=Brevibacillus ... 128 3e-28 UniRef50_B8DKE3 Transcriptional regulator, LysR family n=1 Tax=D... 128 3e-28 UniRef50_A5WGC3 Transcriptional regulator, LysR family n=4 Tax=M... 128 3e-28 UniRef50_D0XXF4 Transcriptional regulator, LysR family n=1 Tax=C... 128 3e-28 UniRef50_Q7WNR8 LysR-family transcriptional regulator n=3 Tax=Bo... 127 4e-28 UniRef50_B2Q0Q6 Putative uncharacterized protein n=1 Tax=Provide... 127 4e-28 UniRef50_D2MBA7 Transcriptional regulator, LysR family n=1 Tax=R... 127 4e-28 UniRef50_C5CRH1 Transcriptional regulator, LysR family n=1 Tax=V... 127 4e-28 UniRef50_Q1QUX6 Transcriptional regulator, LysR family n=1 Tax=C... 127 4e-28 UniRef50_C4U6X1 LysR-family transcriptional regulatory protein n... 127 4e-28 UniRef50_Q2RHB2 Transcriptional regulator, LysR family n=1 Tax=M... 127 4e-28 UniRef50_Q1N2S5 Transcriptional regulator, LysR family protein n... 127 4e-28 UniRef50_B5JLL8 Putative uncharacterized protein n=1 Tax=Verruco... 127 4e-28 UniRef50_B9JXG6 Transcriptional regulator n=1 Tax=Agrobacterium ... 127 4e-28 UniRef50_B4ETB5 LysR-family transcriptional regulator n=7 Tax=En... 127 4e-28 UniRef50_Q0K190 Transcriptional regulator, LysR-family n=1 Tax=R... 127 4e-28 UniRef50_Q394I3 Transcriptional regulator, LysR family n=2 Tax=B... 127 4e-28 UniRef50_Q7WPW7 LysR family regulatory protein n=4 Tax=Bordetell... 127 4e-28 UniRef50_Q2RHG4 Transcriptional regulator, LysR family n=1 Tax=M... 127 4e-28 UniRef50_D1ULQ3 Transcriptional regulator, LysR family n=1 Tax=B... 127 5e-28 UniRef50_A1HNI4 Transcriptional regulator, LysR family n=1 Tax=T... 127 5e-28 UniRef50_Q8XFS3 Probable transcription regulator protein n=1 Tax... 127 5e-28 UniRef50_D1X3G6 Transcriptional regulator, LysR family n=5 Tax=S... 127 5e-28 UniRef50_P77782 Pep2 n=2 Tax=root RepID=P77782_ENTAE 127 5e-28 UniRef50_C6CDP6 Transcriptional regulator, LysR family n=7 Tax=E... 127 5e-28 UniRef50_UPI0001B53BEC LysR family transcriptional regulator n=1... 127 5e-28 UniRef50_Q1GEX3 Transcriptional regulator, LysR family n=1 Tax=R... 127 5e-28 UniRef50_Q39MH6 Transcriptional regulator, LysR family n=3 Tax=B... 127 5e-28 UniRef50_C7NJ53 Transcriptional regulator n=1 Tax=Kytococcus sed... 127 5e-28 UniRef50_A0JQW9 Transcriptional regulator, LysR family n=2 Tax=A... 127 5e-28 UniRef50_D2TUF6 LysR-family transcriptional regulator n=1 Tax=Ci... 127 5e-28 UniRef50_Q89E43 Transcriptional regulatory protein n=1 Tax=Brady... 127 5e-28 UniRef50_D2Q132 Transcriptional regulator, LysR family n=3 Tax=A... 127 5e-28 UniRef50_Q46PU2 Transcriptional regulator, LysR family n=1 Tax=R... 127 5e-28 UniRef50_D2RNT0 Transcriptional regulator, LysR family n=1 Tax=A... 127 6e-28 UniRef50_B5CY17 Putative uncharacterized protein n=2 Tax=Bactero... 127 6e-28 UniRef50_P16931 HTH-type transcriptional regulator dgdR n=16 Tax... 127 6e-28 UniRef50_C7MTU9 Transcriptional regulator, LysR family n=3 Tax=A... 127 6e-28 UniRef50_B0MH18 Putative uncharacterized protein n=4 Tax=Bacteri... 127 6e-28 UniRef50_B1HZ14 Transcriptional regulator-like protein (LysR fam... 127 6e-28 UniRef50_Q0BF95 Transcriptional regulator, LysR family n=3 Tax=B... 127 6e-28 UniRef50_UPI00016945D8 transcriptional regulator, LysR family pr... 127 6e-28 UniRef50_A3PPE3 Transcriptional regulator, LysR family n=5 Tax=A... 127 6e-28 UniRef50_C8Q1K2 Transcriptional regulator, LysR family n=1 Tax=P... 127 6e-28 UniRef50_A5FEQ6 Transcriptional regulator, LysR family n=1 Tax=F... 127 6e-28 UniRef50_Q0K6U2 Transcriptional regulator, LysR-family n=3 Tax=C... 127 6e-28 UniRef50_A3UQR4 Transcriptional regulator, LysR family n=1 Tax=V... 127 6e-28 UniRef50_B2T942 Transcriptional regulator, LysR family n=1 Tax=B... 127 7e-28 UniRef50_UPI000178A8A2 transcriptional regulator, LysR family n=... 127 7e-28 UniRef50_Q12BV9 Transcriptional regulator, LysR family n=5 Tax=c... 127 7e-28 >UniRef50_A7ZTR6 HTH-type transcriptional regulator yidZ n=122 Tax=Gammaproteobacteria RepID=YIDZ_ECO24 Length = 319 Score = 316 bits (812), Expect = 4e-85, Method: Composition-based stats. Identities = 316/319 (99%), Positives = 319/319 (100%) Query: 1 MKKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPL 60 MKKSITTLDLNLLLCLQLLMQERSVTKAAKR+NVTPSAVSKSLAKLRAWFDDPLFVNSPL Sbjct: 1 MKKSITTLDLNLLLCLQLLMQERSVTKAAKRMNVTPSAVSKSLAKLRAWFDDPLFVNSPL 60 Query: 61 GLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIY 120 GLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSK+IY Sbjct: 61 GLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKRIY 120 Query: 121 QRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 QRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP Sbjct: 121 QRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 Query: 181 CVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQ 240 CVWLRKDHPALH+TWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQ Sbjct: 181 CVWLRKDHPALHETWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQ 240 Query: 241 SLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 SLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH Sbjct: 241 SLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 Query: 301 NPKIVWLRETIKNLYASMA 319 NPKIVWLRETIKNLYASMA Sbjct: 301 NPKIVWLRETIKNLYASMA 319 >UniRef50_B9Z480 Transcriptional regulator, LysR family n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z480_9NEIS Length = 303 Score = 316 bits (810), Expect = 9e-85, Method: Composition-based stats. Identities = 76/317 (23%), Positives = 125/317 (39%), Gaps = 20/317 (6%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 + T D+ LL + + RSVT+AA + + AVS +LAKLR FDDPLFV G+ P Sbjct: 1 MQTADVRLLQVFDEIYKTRSVTRAADNLGLGQPAVSIALAKLREHFDDPLFVRIANGMEP 60 Query: 65 TPLMVSMEQNLAEWMQMSNLLLDKPHHQTPR--GLKFELAAESPLMMIMLNALSKQIYQR 122 TP+ +E + + + +L+ P F ++ +++L L Q+ + Sbjct: 61 TPMARELEHAVRQALDALDLVFGHRIDFDPASSERTFCISMTDISQLVLLPKLWAQLRKT 120 Query: 123 YPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCV 182 P I + ++ + GE D+ + L + LF Sbjct: 121 SPGVHIDIVPLSAETPRMLETGEADLALGF----------MPQLEAGFYQQSLFRQRYVC 170 Query: 183 WLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 DHP +H L F H + + LD + G R IA+ +P + Sbjct: 171 VASTDHPRIHDELTLAQFETEEHAVVTSSGTGHLILDREIARQGITRHIALRVPNYLGIA 230 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 F+ Q D +L+ R Q + + +P + WH+R H+P Sbjct: 231 FVVEQTD-MLVTIPERLAQVLEGRGRFRVFPVPFELP-------DYAVKQHWHERYHHDP 282 Query: 303 KIVWLRETIKNLYASMA 319 WLR I +L ++ A Sbjct: 283 GNRWLRRVISDLLSAPA 299 >UniRef50_A6T413 Transcriptional regulator, LysR family n=1 Tax=Janthinobacterium sp. Marseille RepID=A6T413_JANMA Length = 302 Score = 313 bits (803), Expect = 5e-84, Method: Composition-based stats. Identities = 75/320 (23%), Positives = 136/320 (42%), Gaps = 23/320 (7%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 +I ++DLNLL+ +++ER+VT AA R+ V+ A+S +LA+LR F+DPLFV + G+ Sbjct: 1 MNIASVDLNLLVAFDAIVKERNVTSAAVRLGVSQPAMSNALARLRIIFNDPLFVRTSQGM 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGL--KFELAAESPLMMIMLNALSKQIY 120 PTP + + ++ ++ L P F +++L L K I Sbjct: 61 QPTPYAEQLIEPVSRACELITSALQINSVFDPATTTKTFSFYMTEIGEILLLPKLLKHIQ 120 Query: 121 QRYPQATIKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 P A +++R +A+ GE+D+ L L + L++D Sbjct: 121 VAAPNACVRVRRIPEQGAKEAMANGEIDLAVG----------LFPYLKAGFYQQRLYTDK 170 Query: 180 PCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDT-WALDNVLQELGRERTIAMSLPEF 238 +R+ HP +H + ++ PH+ + + A++ +L R I M+ F Sbjct: 171 FACIVRQGHPTVHDSLTPQQYVDTPHVIVMSANTGHDAAIEKILLTEHLRRKIVMTSQNF 230 Query: 239 EQSLFMAAQPDNLLLATAPRYCQYYNQ-LHQLPLVALPLPFDESQQKKLEVPFTLLWHKR 297 + Q D + R Q + ++ P+PF V WH+R Sbjct: 231 LVLPMIIEQTDAIA-TIPFRMAQKIASYSTGIKILESPIPFP-------NVDIKQHWHER 282 Query: 298 NSHNPKIVWLRETIKNLYAS 317 ++P W+R+ + L+ Sbjct: 283 FHYDPANKWMRDLMVTLFRE 302 >UniRef50_A9G5G2 Nodulation protein D n=2 Tax=Proteobacteria RepID=A9G5G2_SORC5 Length = 366 Score = 311 bits (797), Expect = 3e-83, Method: Composition-based stats. Identities = 73/315 (23%), Positives = 138/315 (43%), Gaps = 18/315 (5%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 + ++DLNL+ L L+ ER +T+A KR+ +T SA S +L +LR F DPLFV + GL Sbjct: 61 HDVASVDLNLVRVLGALLDERHLTRAGKRLGLTQSATSHALGRLRRLFGDPLFVRTSRGL 120 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQ--TPRGLKFELAAESPLMMIMLNALSKQIY 120 +PT + + + E M+ + F +A ++ L ++ Sbjct: 121 APTARAEELAEPVREAMRALDRCFRAEEPFVAASAARSFSVATADYGSFVLAPKLLDRLG 180 Query: 121 QRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 + P + LR D + + RG+ D+ + LP I +L+ + Sbjct: 181 REAPNVDLWLRALDASFEEQLARGDADVVVAPARRD--------GLPAGIHSRLLYRERF 232 Query: 181 CVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQ 240 +RK HP + + +L ++ H+ I + +D L +LG+ R +A+++P F Sbjct: 233 ACLVRKGHPLVKKGIDLASWTSMRHVFIAPRGTPGGVVDETLAQLGKRRRVALAVPHFLL 292 Query: 241 SLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 + + A D L++ R + + ++ L +V P+ + WH+R+ Sbjct: 293 APHVVAGSD-LVVTVGARVAEAFAEILPLRVVDPPVKLP-------GFEVRMYWHERHHR 344 Query: 301 NPKIVWLRETIKNLY 315 +P W R+ ++ Sbjct: 345 DPAQQWFRDAVRGAA 359 >UniRef50_C3KKF8 Putative transcriptional regulatory protein, LysR-family n=1 Tax=Rhizobium sp. NGR234 RepID=C3KKF8_RHISN Length = 304 Score = 308 bits (789), Expect = 2e-82, Method: Composition-based stats. Identities = 80/321 (24%), Positives = 136/321 (42%), Gaps = 22/321 (6%) Query: 1 MKK-SITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSP 59 MK +I ++DLNLL+ L+ E T+AA+RI +T AVS +L +LRA F DPLFV SP Sbjct: 1 MKPVNIASIDLNLLVVFDALVAEGHATRAAERIGLTQPAVSHALNRLRALFGDPLFVRSP 60 Query: 60 LGLSPTPLMVSMEQNLAEWMQMSNLLLD--KPHHQTPRGLKFELAAESPLMMIMLNALSK 117 G+ TP + + ++ ++L +F L ++L L+ Sbjct: 61 RGMVATPAALDAAPAIRSILEQVEVVLSGGPAFEPEESTRQFVLGLSDYAAFVLLPRLTA 120 Query: 118 QIYQRYPQATIKLRNWDYDS-LDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLF 176 ++ + P ++ +RN + L + G V++ P + E+L+ Sbjct: 121 RLEREAPNISLVIRNTSHGVGLPMLEEGSVELIAGN----------FPGPPSHMREELLY 170 Query: 177 SDVPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLP 236 + R DHPAL +LD +L H+ + + +D VL E G +R +A+++ Sbjct: 171 EEDFVCAGRGDHPALAYPLDLDRYLSLRHLQVSTRGNPHGYVDAVLAERGLKRKVAVTVG 230 Query: 237 EFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHK 296 F + F+ D L+ R + L A P+ WH Sbjct: 231 HFLMAPFLVDSSD-LVATEPRRLFEPMPSRLPLRFFAPPIDLP-------PFRVVQAWHA 282 Query: 297 RNSHNPKIVWLRETIKNLYAS 317 R+ +P WLR ++ + Sbjct: 283 RHEADPGHQWLRRVLREISQR 303 >UniRef50_Q2S713 Transcriptional regulator n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2S713_HAHCH Length = 329 Score = 304 bits (780), Expect = 3e-81, Method: Composition-based stats. Identities = 67/311 (21%), Positives = 135/311 (43%), Gaps = 22/311 (7%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 + +DLNLL+ +M E S++ AA+R+++T AVS ++A++R ++DPLFV + G+ P Sbjct: 1 MRNIDLNLLVIFDAIMTESSISGAAERLSMTQPAVSNAVARMRQVWNDPLFVKNGRGIQP 60 Query: 65 TPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQIYQR 122 T +S+ ++ + ++ P +F + ++ + + + Sbjct: 61 TTHALSLWHQVSGPLIQLKDAVNPQ-DFDPSTTRRRFRVGMSDITTDLIWLPMRRMVETE 119 Query: 123 YPQATIKLRNWDYDSLDA-ITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPC 181 P + + ++ ++ +T GEVD+ ++ + + LF Sbjct: 120 APNIDLHAVPANGNNSESILTNGEVDLIVG----------VMQEFRTSFRNDFLFESDYV 169 Query: 182 VWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQS 241 +RKDHP + L+ +L+ H+ + T +D L + G R +AM++ F Sbjct: 170 CAMRKDHPLAAEPLTLEKYLKADHLLVSLTGEATGFVDITLSQQGLSRRVAMTVNHFASV 229 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 + D + + + L + PL P +++WH R+ + Sbjct: 230 PALLEGSDLISIV-PNMVIAKGAKCGSLHVTKPPLEI-------RPTPVSMIWHARHDRD 281 Query: 302 PKIVWLRETIK 312 P ++WLRE IK Sbjct: 282 PGVLWLREKIK 292 >UniRef50_B0C5B7 Transcriptional regulator, LysR-family n=1 Tax=Acaryochloris marina MBIC11017 RepID=B0C5B7_ACAM1 Length = 300 Score = 303 bits (778), Expect = 4e-81, Method: Composition-based stats. Identities = 68/314 (21%), Positives = 130/314 (41%), Gaps = 20/314 (6%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 + DLNLL+ L +L++ERSV+K A+R+ ++ AVS +L +LR DP+ V L + Sbjct: 1 MDLRGFDLNLLVVLHILLKERSVSKTAERLQLSQPAVSAALNRLRTALKDPILVRDGLQM 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPR--GLKFELAAESPLMMIMLNALSKQIY 120 PTP + + + + L P F +A +++ L ++ Sbjct: 61 VPTPRAEQLVEPVQAIVSAIEQTLADPQPFDYSSISRTFRIATNDYGAFVLVPFLMNRMQ 120 Query: 121 QRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 + P T ++ + D A+ GE+D+ + + + + LFS+ Sbjct: 121 KIAPHLTFEIWDIALDVETALREGEIDLVIADAWTLRNCK----------CRKTLFSETF 170 Query: 181 CVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQ 240 +R++HP + +D +L+ H + T +D L + ++R + ++LP Sbjct: 171 TCLVRQNHPRVDTQLTMDDYLQEKHALVSARGRVTGNVDIALSQQNKQRQVQITLPHILA 230 Query: 241 SLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 M A D +++ A R + + L P+ D + W R + Sbjct: 231 IPAMMAATD-MIVTVATRIANRFAVDYHLQTFPPPITLD-------GFDIAMAWPHRMDN 282 Query: 301 NPKIVWLRETIKNL 314 + I WLR + + Sbjct: 283 DTAIRWLRNELVAI 296 >UniRef50_Q3KA14 LysR family regulatory protein n=24 Tax=Bacteria RepID=Q3KA14_PSEPF Length = 314 Score = 302 bits (775), Expect = 1e-80, Method: Composition-based stats. Identities = 66/320 (20%), Positives = 134/320 (41%), Gaps = 25/320 (7%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 +++ +DLNL + + E ++T+A + + +T AVS +LA+LR F+DPLFV + G+ Sbjct: 1 MNLSKVDLNLFIVFDAIYTEANLTRAGQIVGITQPAVSNALARLRETFNDPLFVRTAQGM 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGL--KFELAAESPLMMIMLNALSKQIY 120 PTP+ ++ + + + + + + P + ++ ++L L +++ Sbjct: 61 VPTPMAQNIIGPVRNALSLLRVSVQESRIFNPSQAVKTYRISMTDLTEAVILPPLFQRLR 120 Query: 121 QRYPQATIK-LRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 + P I+ + ++ + G +D + + + L D Sbjct: 121 RLAPTVIIESFLSKRRETTKELAAGRLDFAVDAPL----------NTDPQVRHVKLMEDR 170 Query: 180 PCVWLRKDHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEF 238 +RK HP + + LD +L HI I +S +D L ++G +R IA+ + Sbjct: 171 YVCAMRKGHPLATKEKFTLDDYLSLTHIHISSRRSGLGHVDLALGKMGIQRKIALRSQHY 230 Query: 239 EQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRN 298 + + Q D ++ + + + H L LP+ V L WH+ Sbjct: 231 LMASQVLQQTDMVMTVP-----ERFARRHDLHAFNLPV------NDVPPVETHLYWHEST 279 Query: 299 SHNPKIVWLRETIKNLYASM 318 +P W+RE + L + Sbjct: 280 DQDPANRWMREQMIELCQQV 299 >UniRef50_Q5P743 Transcriptional regulator, LysR family n=2 Tax=Betaproteobacteria RepID=Q5P743_AZOSE Length = 301 Score = 301 bits (772), Expect = 2e-80, Method: Composition-based stats. Identities = 67/315 (21%), Positives = 122/315 (38%), Gaps = 20/315 (6%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 + TL++ L + + RSV++AA+ + + AVS +L KLR F DPLFV + G+ P Sbjct: 1 METLEIRQLSVFDEIYKTRSVSRAAENLGLGQPAVSIALGKLREHFGDPLFVRTSAGMEP 60 Query: 65 TPLMVSMEQNLAEWMQMSNLLLDKPHHQTP--RGLKFELAAESPLMMIMLNALSKQIYQR 122 TPL + + + + + P F +A +++L L +++ Sbjct: 61 TPLGEELAEPIRVAVAAVSAASGHRAEFDPTRARRTFRIAMTDISQLVLLPRLWERLRTV 120 Query: 123 YPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCV 182 P I + N ++ + GEVD+ + L + LF Sbjct: 121 APGIHIDIANLSANTAGMLESGEVDVALGF----------MPQLEAGFYQQALFRQHYVC 170 Query: 183 WLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 HP + + L F H + + +D + +R + + +P F Sbjct: 171 MASATHPRIRRGLTLAQFEAEEHAVVSTSGTGHLIIDREIARQDIKRRVVLRIPSFVGIA 230 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 ++ + LL+ R + +L + +P P E WH R +++P Sbjct: 231 YVVERT-ALLVTIPQRLGELLADEERLRVYPVPFPLP-------EYAVKQHWHGRYNNDP 282 Query: 303 KIVWLRETIKNLYAS 317 WLR I+ L +S Sbjct: 283 GNRWLRALIQELLSS 297 >UniRef50_B1KAV0 Transcriptional regulator, LysR family n=5 Tax=Burkholderia cepacia complex RepID=B1KAV0_BURCC Length = 345 Score = 301 bits (772), Expect = 2e-80, Method: Composition-based stats. Identities = 74/318 (23%), Positives = 125/318 (39%), Gaps = 20/318 (6%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 I +DLNLL L+++R VT+A I ++ A+S +L+KLR F+DPLFV + G+ Sbjct: 1 MDIRQVDLNLLKVFDALLKKRHVTQAGVSIGLSQPAMSYALSKLRELFEDPLFVRTGRGM 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQIY 120 PTP ++ + +A + + + P F L M+ L L + Sbjct: 61 EPTPRAQALGEPVARLLDLVQTEILPMPEFRPAESSRNFVLCMSDIGEMVFLPRLESFLD 120 Query: 121 QRYPQATIKLRNWD-YDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 + P +IK + + + G+VD+ ++ + L+ Sbjct: 121 KAAPHVSIKTVALSMPELEEGLASGDVDLAIGYFPGLNSE---------SLKRKALYRHS 171 Query: 180 PCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFE 239 R DHP + T +LD + H+ + E + L + LG + S P F Sbjct: 172 YVCIARDDHPEIGDTLSLDQYRAAAHVMVHPEGREQDVLARTHERLGIRVNVRFSTPRFI 231 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 F+ A D + A + + + + L+ LP P L WH R Sbjct: 232 GVPFVVAGSDMIA-AVPQAVGRRFAEFVNVKLLPLPFPAPT-------YELYLHWHPRFH 283 Query: 300 HNPKIVWLRETIKNLYAS 317 H P W+R+ + L Sbjct: 284 HEPANRWIRDAMSELVKG 301 >UniRef50_C6XIT5 Transcriptional regulator, LysR family n=1 Tax=Hirschia baltica ATCC 49814 RepID=C6XIT5_HIRBI Length = 318 Score = 300 bits (770), Expect = 3e-80, Method: Composition-based stats. Identities = 74/314 (23%), Positives = 132/314 (42%), Gaps = 21/314 (6%) Query: 6 TTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPT 65 DLNLL L +ER+VT+AA+R+NVT AVS +L++LR F D LF+ +P G+ PT Sbjct: 3 KKFDLNLLNTFDALWRERNVTRAARRLNVTQPAVSNALSRLRETFGDELFIRTPSGVDPT 62 Query: 66 PLMVSMEQNLAEWMQMSNLLLDKPHHQTP--RGLKFELAAESPLMMIMLNALSKQIYQRY 123 + ++ E ++ L P F + A ++L L + + ++ Sbjct: 63 ERCSEIAIDVREALRHVERTLASHDSFDPTVSERTFRIGAMDYFDHVVLPPLMEDLRKKA 122 Query: 124 PQATIKLRNWD-YDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCV 182 P+ +++ ++ DA+ G++D F + P I++ + + + Sbjct: 123 PRVDLRISPVKLGETYDALDSGDLDFLFFSG----------TEPPKRINFSPMLEEKFVL 172 Query: 183 WLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 +R +HP + Q LD + HI +D++L E G R +A++ Sbjct: 173 IMRANHPKMCQEMTLDAYADLTHIVFSTRGDSHTRIDDLLAENGLRRRVALTSSHHTSIA 232 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 D + L+ R Y L V P+ F L W +R + +P Sbjct: 233 ETVRDTDMVALS-PSRLAHRYVHRGGLIAVQPPVEFP-------HFHLRLYWSRRLNSDP 284 Query: 303 KIVWLRETIKNLYA 316 +WLR + ++ Sbjct: 285 GAMWLRNILGDVCK 298 >UniRef50_A1W256 Transcriptional regulator, LysR family n=2 Tax=Comamonadaceae RepID=A1W256_ACISJ Length = 323 Score = 300 bits (768), Expect = 6e-80, Method: Composition-based stats. Identities = 71/317 (22%), Positives = 123/317 (38%), Gaps = 12/317 (3%) Query: 4 SITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLS 63 + TLDLNLL +M ER++T+AA+++ +T AVS +L +LR D L G+ Sbjct: 5 NFRTLDLNLLRVFDEVMAERNLTRAAEKLAITQPAVSNALRRLREVLGDELVTRRGHGVE 64 Query: 64 PTPLMVSMEQNLAEWMQMSNLLLDK-PHHQTPRGLKFELAAESPLMMIMLNALSKQIYQR 122 PTP +++ + + L F LA ++ L + + + Sbjct: 65 PTPRALALWPAVRHALAQLQETLSPGRFDPASAQTTFVLAMADATGATLIPPLIEIVERE 124 Query: 123 YPQATIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYE--VLFSDV 179 P ++++ D + D+ + + + +E L+ Sbjct: 125 APGVSLRVVPLTTRDPRRLLDEESADMAVGYFPAVLADLTARAQSDNVVAHESTRLYDSQ 184 Query: 180 PCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFE 239 +R DHP LD + H+ + + +D L LGRER I +++ +F Sbjct: 185 YVCVMRADHPLAAVPMTLDLYCAARHLLVSFSGKPFGFIDGALAALGRERRIVLTVNQFF 244 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 + + A D LL + + +L LP+ V LWH+R + Sbjct: 245 TAGRVVATTD-LLTVLPRHFVGVASVRDELVWRPLPMTLP-------PVHVDALWHRRRN 296 Query: 300 HNPKIVWLRETIKNLYA 316 H+P WLRE I Sbjct: 297 HDPAHRWLREAIARAAR 313 >UniRef50_P10183 HTH-type transcriptional activator nahR n=67 Tax=Bacteria RepID=NAHR_PSEPU Length = 300 Score = 297 bits (761), Expect = 4e-79, Method: Composition-based stats. Identities = 72/316 (22%), Positives = 122/316 (38%), Gaps = 21/316 (6%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 + LDLNLL+ L+ +R V+ A+ + +T AVS +L +LR DPLFV + G+ Sbjct: 1 MELRDLDLNLLVVFNQLLVDRRVSITAENLGLTQPAVSNALKRLRTSLQDPLFVRTHQGM 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTP--RGLKFELAAESPLMMIMLNALSKQIY 120 PTP + + + M L P F LA + + L + Sbjct: 61 EPTPYAAHLAEPVTSAMHALRNALQHHESFDPLTSERTFTLAMTDIGEIYFMPRLMDVLA 120 Query: 121 QRYPQATIK-LRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 + P I +R+ + A+ G VD+ LL +L L + Sbjct: 121 HQAPNCVISTVRDSSMSLMQALQNGTVDLAVG----------LLPNLQTGFFQRRLLQNH 170 Query: 180 PCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFE 239 RKDHP + L+ F Y H+ + + +D + +G R I + +P F Sbjct: 171 YVCLCRKDHPVTREPLTLERFCSYGHVRVIAAGTGHGEVDTYMTRVGIRRDIRLEVPHFA 230 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 + + D LL R + L + P+ E+ + WH + Sbjct: 231 AVGHILQRTD-LLATVPIRLADCCVEPFGLSALPHPVVLP-------EIAINMFWHAKYH 282 Query: 300 HNPKIVWLRETIKNLY 315 + +WLR+ + +L+ Sbjct: 283 KDLANIWLRQLMFDLF 298 >UniRef50_Q2S7V2 Transcriptional regulator n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2S7V2_HAHCH Length = 310 Score = 295 bits (757), Expect = 1e-78, Method: Composition-based stats. Identities = 82/318 (25%), Positives = 135/318 (42%), Gaps = 21/318 (6%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 I+ +DLNL + + E +T+A++ +++T AVS +L +LR D LF+ S G+ Sbjct: 1 MHISRIDLNLFVVFDAIYSEGGITRASEVLHLTQPAVSHALNRLRETLGDELFIRSSRGM 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGLK--FELAAESPLMMIMLNALSKQIY 120 +PTP + + + + L + P L+ F L +++L AL K Sbjct: 61 TPTPYAHQLIGTVRQALNQLQRGLHQGQEFAPAQLETSFRLCVRDLFDVLLLPALIKNCR 120 Query: 121 QRYPQATIK-LRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 P+ LR+ L + G +D+ ++L S +I +E LF D Sbjct: 121 AIAPKVVFNCLRSPREQILHDLASGRIDLA----------ADVLISHDDSICHEKLFEDR 170 Query: 180 PCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFE 239 LR+DHPAL W+L LR+PH+ + + D L G +R + + P F Sbjct: 171 LTCLLRRDHPALASEWSLAEMLRWPHVQVSSREHGPGYEDIQLSRHGLQRKLGLRTPNFY 230 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 + AA D +L A + + Q L ++ PL + L WH+ Sbjct: 231 GAALTAANSDLILCA-PEQVARKLTQTIPLQVMPFPLTL-------NPLETYLYWHRSTD 282 Query: 300 HNPKIVWLRETIKNLYAS 317 P +WLRE + A Sbjct: 283 REPAHIWLREQTQRALAQ 300 >UniRef50_Q12H69 Transcriptional regulator, LysR family n=14 Tax=Burkholderiales RepID=Q12H69_POLSJ Length = 342 Score = 295 bits (756), Expect = 1e-78, Method: Composition-based stats. Identities = 76/317 (23%), Positives = 125/317 (39%), Gaps = 12/317 (3%) Query: 4 SITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLS 63 + TLDLNLL +M ERS+T+AA+ +++T AVS +L +LR D L S G++ Sbjct: 29 NFRTLDLNLLRVFDEVMAERSLTRAARNLSLTQPAVSNALRRLRETLGDELVQRSGQGMA 88 Query: 64 PTPLMVSMEQNLAEWMQMS-NLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQR 122 PTP ++ + E +Q L+ F LA ++ L + + Q Sbjct: 89 PTPRARAIWPAVREALQRLQESLIPDEFVPGQATTTFVLAMADATAAELIPGLIETLEQE 148 Query: 123 YPQATIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSR--ELLSSLPLAIDYEVLFSDV 179 P ++++ D + D+ S S P+ + L+ Sbjct: 149 APGVSMRVIPLTTRDPRRLLDEQACDLAVGYFPSVLADLTAHAQSGEPMPFQHRRLYDGE 208 Query: 180 PCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFE 239 +RK HP LD F H+ + + +D L LGRER + +++ +F Sbjct: 209 YVCVMRKGHPLASGPLTLDRFCAARHMLVSFSGRPYGFIDESLASLGRERQVVLTVNQFF 268 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 + + A + LL + + QL L LP V +WH+R+ Sbjct: 269 TAGRVVANSN-LLTVLPRHFVRVTGIAEQLVLRPLPFDVSA-------VHVDAVWHRRSQ 320 Query: 300 HNPKIVWLRETIKNLYA 316 VWLRE + Sbjct: 321 QRGAHVWLREAVLRAAD 337 >UniRef50_A9GLW1 Transcriptional regulator, LysR family n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9GLW1_SORC5 Length = 315 Score = 294 bits (755), Expect = 2e-78, Method: Composition-based stats. Identities = 74/297 (24%), Positives = 130/297 (43%), Gaps = 20/297 (6%) Query: 22 ERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSMEQNLAEWMQM 81 E SVT+AA R+ ++ SA+S +L +LR DDP+ V +P G+ PTP + + E + Sbjct: 35 EGSVTRAAARVGLSQSAMSHALGRLRVLIDDPVLVRTPRGMIPTPRAQELIGPIREALAK 94 Query: 82 SNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQIYQRYPQATIKLRNWDYDSLD 139 + + P F +A + +I+L L +++ P + R +D + Sbjct: 95 IEATVARSPRFEPATARRSFTVATVDYVELILLPRLVQKLVSEAPFIDLVARPYDSEMWS 154 Query: 140 AITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPALHQTWNLDT 199 A+ G+VD+ LL +LP + L + +R+ HPA+ L T Sbjct: 155 AMETGKVDLAIG----------LLPALPAGFYRQRLIEERYMCVVRRSHPAVRGKLTLKT 204 Query: 200 FLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQPDNLLLATAPRY 259 + PH I +D VL E G R +A+ +P F + + AQ D L+L R Sbjct: 205 YTSLPHALISPRGEGGGRVDEVLAERGLSRRVALQIPHFLVAAHIVAQTD-LVLTVPARI 263 Query: 260 CQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWLRETIKNLYA 316 + + ++ +L ++ P+ +WH+R++ +P WLR + Sbjct: 264 ARVFAEMEELHVMKPPVEL-------GGFSVDQVWHERHAKDPAHTWLRGVFAEIAR 313 >UniRef50_Q473Q1 Transcriptional regulator, LysR family n=9 Tax=Burkholderiaceae RepID=Q473Q1_RALEJ Length = 315 Score = 294 bits (753), Expect = 3e-78, Method: Composition-based stats. Identities = 75/321 (23%), Positives = 135/321 (42%), Gaps = 21/321 (6%) Query: 2 KKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLG 61 ++ +DLNL + + E S+T AA+++N+T AVS +L +LR FDDPLF G Sbjct: 3 AMQLSRIDLNLFVVFDAIYSEGSITAAARQLNLTQPAVSHALGRLRGLFDDPLFERRGQG 62 Query: 62 LSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQI 119 ++PTPL S+ + +Q L H P +F + L +L L ++ Sbjct: 63 MAPTPLARSLASEVRSALQSFARTLQDTPHFDPTNTVRRFTIGMRDALESTLLPPLMARV 122 Query: 120 YQRYPQATIKLRNWDYDSLD-AITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSD 178 PQ I +D ++ + G +D ++L + AI + +D Sbjct: 123 TSVAPQVEIAAIRFDRREMESELLAGTIDAAI----------DILLPVSPAIHHAQFMAD 172 Query: 179 VPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEF 238 V R+DHP + + L+ +L H+ + + D L +G R + + + Sbjct: 173 PMIVLARRDHPLVKKELTLERYLAAEHVHVSSRRRGAGLEDQALHRMGLTRRVRLRCQHY 232 Query: 239 EQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRN 298 + + + D LL RY + N+ + +++LP + L WH Sbjct: 233 AAACRVVSCTD-LLATLPLRYARIANEPYANRILSLPFKVP-------SLELHLYWHAGG 284 Query: 299 SHNPKIVWLRETIKNLYASMA 319 ++ WLRE + + +S+ Sbjct: 285 ENDGANRWLREQLMAVMSSLG 305 >UniRef50_C6ARG9 Transcriptional regulator, LysR family n=7 Tax=Proteobacteria RepID=C6ARG9_RHILS Length = 310 Score = 293 bits (751), Expect = 6e-78, Method: Composition-based stats. Identities = 68/316 (21%), Positives = 132/316 (41%), Gaps = 21/316 (6%) Query: 7 TLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTP 66 DLNLL LM+ER+VT+AA+++ +T AVS +L +LR DPLF+ G+ PT Sbjct: 2 KYDLNLLPVFVALMEERNVTRAAEQLGMTQPAVSNALNRLRETLRDPLFIRERYGMKPTE 61 Query: 67 LMVSMEQNLAEWMQMSNLLLDKPHHQTP--RGLKFELAAESPLMMIMLNALSKQIYQRYP 124 + ++ + + + ++ P +F +A S + +++ + ++ + P Sbjct: 62 MAEALAPVIRGALASLDDVILGQQAFDPARATRQFTIAPNSYVEFVLMPVIVARLRECAP 121 Query: 125 QATIKLRNWDYDSLD-AITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVW 183 ++L + D + G ++ + P + + L D Sbjct: 122 GIRLRLTPFGNDLAETGAMSGATEMVLGR----------IVEPPDNMVVQHLMDDGLACV 171 Query: 184 LRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 +RKDHP + ++ + + + R H+++ L +LQ+ G R +++S+ F Sbjct: 172 VRKDHPEIAESISEEQYQRMRHVNVLPPGRMRVGLFQMLQQAGLRRDVSVSVTHFLAVPE 231 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 M A D C + +L ++ P+ P L WH R ++P Sbjct: 232 MVAVTDY-CATLPRLICHRLARDPRLKVLPAPVDL-------GRFPVELAWHVRYRNDPA 283 Query: 304 IVWLRETIKNLYASMA 319 WLR I + ++ Sbjct: 284 HRWLRSLISEVAKEVS 299 >UniRef50_Q15UP0 Transcriptional regulator, LysR family n=4 Tax=Alteromonadales RepID=Q15UP0_PSEA6 Length = 305 Score = 293 bits (750), Expect = 8e-78, Method: Composition-based stats. Identities = 78/319 (24%), Positives = 135/319 (42%), Gaps = 24/319 (7%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 ++ +DLNL + S+TKAA + +T AVS SLA+LR +DPLFV + + Sbjct: 1 MNLNRIDLNLFAVFDAIYTAGSLTKAADVLCITQPAVSNSLARLREMLNDPLFVRTGHSM 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFE--LAAESPLMMIMLNALSKQIY 120 +PTP ++ E + + + + H P + AA L ++ L+ Q+ Sbjct: 61 TPTPAAQNIIGPAREALGLLRKSVQESHTFDPATAEISYNFAARDLLEASIMPRLTAQLQ 120 Query: 121 QRYPQATIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 P T+ + + + A+ G +D + + + + + + D Sbjct: 121 NVAPNITLTNYDISRSNIVSAMASGSLDF---------YADASSAFVDPHLCKQKIAEDR 171 Query: 180 PCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFE 239 V R++HPAL Q NLDTFL+ HI+I ++ +D L +L +R + M F Sbjct: 172 FVVIARRNHPALSQGLNLDTFLQLGHINISQRRTGAGPIDVALDKLNLKRRVVMRGQHFL 231 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 + + D L+A P + + + + LP V + L WH Sbjct: 232 TVPAVIVKTD--LIACVPY---HLAKHYDCSIYELPFEL-------APVEYFLYWHVSAD 279 Query: 300 HNPKIVWLRETIKNLYASM 318 H+ +WLRE I + + Sbjct: 280 HDHAHMWLREQIAEVVTTF 298 >UniRef50_A0LD88 Transcriptional regulator, LysR family n=1 Tax=Magnetococcus sp. MC-1 RepID=A0LD88_MAGSM Length = 312 Score = 292 bits (749), Expect = 9e-78, Method: Composition-based stats. Identities = 69/315 (21%), Positives = 128/315 (40%), Gaps = 19/315 (6%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 + DLNLL+ LM ER VT+A +R+ +T +A+S +L +LR FDDPLF+ + + P Sbjct: 9 LNKFDLNLLVAFDALMSERGVTRAGRRLGITQAAMSNTLRRLRTAFDDPLFIKTGARMEP 68 Query: 65 TPLMVSMEQNLAEWMQMSNLLLD-KPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRY 123 TP + + + ++ ++ LD F + + ++ AL + + Sbjct: 69 TPRAMELSGMIEAALKQVHVALDNDSFDPANSHYVFRVGMVDYTVPLVFPALLDHLEKYA 128 Query: 124 PQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVW 183 P +++ N + + GEVD+ S L P + V+ Sbjct: 129 PNCILEVVNTGDFEGEMLESGEVDLVLSR----------LDQAPRGLKSRVVGEIPFVCI 178 Query: 184 LRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 R HP + + L+ +L+ H+ +D L+ + +ER + + L F Sbjct: 179 YRPGHPLIKEPMTLEQYLQARHVHYYPPMVKEGLVDLGLKAINQERNVVVRLDSFGMVPT 238 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 + A+ D + T L + LP + F ++WH R+ + Sbjct: 239 LVAETDLIAAVTHTS-AHVIAPAMGLKVQPLPFEAP-------PLQFVMVWHDRSEESAP 290 Query: 304 IVWLRETIKNLYASM 318 W RE + ++ S+ Sbjct: 291 HQWFREQVLHMLISL 305 >UniRef50_B4X4B4 LysR substrate binding domain protein n=1 Tax=Alcanivorax sp. DG881 RepID=B4X4B4_9GAMM Length = 304 Score = 292 bits (749), Expect = 1e-77, Method: Composition-based stats. Identities = 74/320 (23%), Positives = 137/320 (42%), Gaps = 23/320 (7%) Query: 1 MKKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPL 60 MK ++ ++DLNLL +M+ +++AA+ + ++ A+S +L +LR F D LFV + Sbjct: 1 MKLNLRSIDLNLLPVFDAIMEAGQLSRAAESLGMSQPAISAALQRLRHTFGDTLFVRTHH 60 Query: 61 GLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQ 118 G++PTP + L + L+ + P F + + M++L L Sbjct: 61 GMTPTPRARELHDQLGPQLVALRDTLNPENRFDPATSQRHFRILSVDYFEMVVLGPLLAT 120 Query: 119 IYQRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSD 178 + Q+ P +++ D D D + +G D+ S + + + VL + Sbjct: 121 LRQQAPHVVLEIIAADDDMPDELHKGRADL----------SVDAFVADDDRLQRNVLLEE 170 Query: 179 VPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEF 238 V R+ HP + + FL H+ + ++ LD +L G +R + +F Sbjct: 171 KLVVIARRSHPHIKGHCDKQQFLDAEHVVL-PNRNRQLPLDQILNAPGWQRRTGARVTQF 229 Query: 239 EQSLFMAAQPDNLLLATAP-RYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKR 297 L + D L+AT P R Q Y + QL ++ P+ VP ++W Sbjct: 230 ASMLAVCGGSD--LIATVPDRLAQQYAETMQLQVLPFPVALP-------PVPIYMIWSPT 280 Query: 298 NSHNPKIVWLRETIKNLYAS 317 +P WLR+ +++ A Sbjct: 281 QQRDPAHRWLRQQLEHTIAQ 300 >UniRef50_A8GKS5 Transcriptional regulator, LysR family n=1 Tax=Serratia proteamaculans 568 RepID=A8GKS5_SERP5 Length = 314 Score = 292 bits (748), Expect = 1e-77, Method: Composition-based stats. Identities = 70/318 (22%), Positives = 121/318 (38%), Gaps = 20/318 (6%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 ++ +DLNLL+ + ++RSV A + + ++ AVS +LA+LR FDDP+FV + Sbjct: 1 MNLKNVDLNLLVVFDAIFRQRSVGLAGQMLGISQPAVSHALARLRQLFDDPMFVRINNEM 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPR--GLKFELAAESPLMMIMLNALSKQIY 120 PT + ++ + M + +P P L L L + Sbjct: 61 RPTDRASELMPSVERVLSMIRDDVLQPVGFDPAANRRTLTLCMPDIGEQYFLPPLINHLA 120 Query: 121 QRYPQATIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 Q P + +A+ G VD+ R+ + LF Sbjct: 121 QVAPGMAVVSHELAPAQLEEALESGRVDLAIGYFPDLRRAV---------FYQQRLFYSG 171 Query: 180 PCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFE 239 C +R+ HP + +T +L FL+ H++ + ++E G R + + F Sbjct: 172 FCCAVRQGHPQIGKTLSLPQFLQAEHVTARLRIRSQEIAEQAMREQGIVRNVKLQTSHFL 231 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 + AQ D L T Q ++ + +P P + P WH+R Sbjct: 232 SLTQIIAQTDLLATVTYEA-AQLLQAAGKVHIYPVPFPIP-------QFPVMQYWHERAH 283 Query: 300 HNPKIVWLRETIKNLYAS 317 H+ WLR I+ L+ Sbjct: 284 HDRGNQWLRGEIRGLFQR 301 >UniRef50_Q12M05 Transcriptional regulator n=3 Tax=Gammaproteobacteria RepID=Q12M05_SHEDO Length = 309 Score = 291 bits (747), Expect = 2e-77, Method: Composition-based stats. Identities = 71/318 (22%), Positives = 136/318 (42%), Gaps = 19/318 (5%) Query: 1 MKKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPL 60 M ++ LDLNLL+ +M+E+S++ AA+++ +T +VS ++A++R + DPLF+ Sbjct: 1 MSAGMSKLDLNLLVIFDAIMKEQSISAAAEQLAMTQPSVSNAVARMRHNWKDPLFIKQGR 60 Query: 61 GLSPTPLMVSMEQNLAEWMQMSNLLLDK-PHHQTPRGLKFELAAESPLMMIMLNALSKQI 119 G+ P+P +++ Q +A ++ + + F +A + AL + + Sbjct: 61 GIKPSPFALALWQQVASPLEQIRSAVSSKTFNAAHSERTFRIAITDGTSGLFWPALRRHL 120 Query: 120 YQRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 + P+ + + D + EVD+ E + I + LF + Sbjct: 121 ERHAPKINLHAVPYKLDGEALLVNAEVDLVLDYYE----------NRHPQILSQHLFDNQ 170 Query: 180 PCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFE 239 + K H +T LD F H+ + + +D L +LG R IAM++ F Sbjct: 171 FVCVMAKAHALSEKTLTLDDFAAAEHLLVSLSGDASGTVDRKLAQLGHSRRIAMTVNSFA 230 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 + + + L+ + L +L + LP VP ++ WH RN Sbjct: 231 SAKTLIEES-RLISTLPYSIIASWQSLDKLTVKTLPFTVP-------SVPISMAWHSRND 282 Query: 300 HNPKIVWLRETIKNLYAS 317 + + WLRE I ++ + Sbjct: 283 ASISLRWLREAIVDIVKT 300 >UniRef50_A1U1I0 Transcriptional regulator, LysR family n=67 Tax=Proteobacteria RepID=A1U1I0_MARAV Length = 336 Score = 289 bits (741), Expect = 9e-77, Method: Composition-based stats. Identities = 69/324 (21%), Positives = 131/324 (40%), Gaps = 34/324 (10%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 I+ +DLNLL+ L +L++ER+VTKAA + +T A+S L +LR F DPL V + G+ Sbjct: 1 MDISRVDLNLLVYLDVLLRERNVTKAANHLGITQPAMSNGLRRLRDLFGDPLLVRTSEGM 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTP--RGLKFELAAESPLMMIMLNALSKQIY 120 + T ++ + + + + F + A ++ + ++I Sbjct: 61 TATERARELQPLVRGILSDIEQAVQEKTPFAAGESQRVFRIMASDYAESCLMPRVLRRIR 120 Query: 121 QRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 Q P T+ + S + +G +D+ + +P + + L+++ Sbjct: 121 QEAPHVTLDVLTPSDVSFLDVEQGRLDMAINR----------FDKIPQSFHQKTLWTEYF 170 Query: 181 CVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWA------------LDNVLQELGRE 228 + +P L + + LDT+L HI + +D L +GR+ Sbjct: 171 ACLMNARNPILKEPFTLDTYLDASHIWVSKTGFGVGVGVNPKDVQRLGWVDEALGRMGRK 230 Query: 229 RTIAMSLPEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQ-LPLVALPLPFDESQQKKLE 287 R I++ ++ ++ +A Q D L+AT P + + + L + P Sbjct: 231 RQISVFTRHYQVAMLLAEQHD--LIATLPSRAAWLQKDNPNLVVKVPPFEIP-------P 281 Query: 288 VPFTLLWHKRNSHNPKIVWLRETI 311 + W HN WLR+ I Sbjct: 282 FELKMAWSPLLQHNSDHQWLRKLI 305 >UniRef50_A3QJ07 Transcriptional regulator, LysR family n=25 Tax=Alteromonadales RepID=A3QJ07_SHELP Length = 330 Score = 289 bits (741), Expect = 9e-77, Method: Composition-based stats. Identities = 99/320 (30%), Positives = 164/320 (51%), Gaps = 13/320 (4%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 ++ +DLNLL+ LQ+L++ERSVT+AA R++++ SA+SKSL +LR DPLF+ + GL Sbjct: 4 DNLARIDLNLLVMLQVLLEERSVTRAASRLHLSQSALSKSLNRLRDTLGDPLFIRTAHGL 63 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKP-HHQTPRGLKFELAAESPLMMIMLNALSKQIYQ 121 PT + Q L + +Q L P + +F A ++ + Sbjct: 64 KPTAHAALLGQQLPDMLQGLYQLTQPPSFNPASSRRQFSFAMVESAYETLIPYFIGPLLN 123 Query: 122 RYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPC 181 P + W SL ++ +G++D G +GR+ +P+S ++ LP I ++ LF+D Sbjct: 124 NAPNLRLDSYLWTEKSLSSLQKGQIDFGITGRDINPQSDLIIDRLPEGIAHQTLFTDHQV 183 Query: 182 VWLRKDHPALHQ----TWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPE 237 +R+ HP L W+LD +L H+ + E ++ WALD L + G+ R ++ ++P+ Sbjct: 184 CLVRQGHPMLPAIRNHQWDLDIYLEMSHVQVRCEGNEWWALDYFLAKSGQRRHLSTTVPD 243 Query: 238 FEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKR 297 F + + A D L+ + + +L+ L LPLPFD + + LLWH+R Sbjct: 244 FYGAASVCAHSD-LIFTLPSSFAAHARKLYALE--ELPLPFDFH-----SLAYVLLWHER 295 Query: 298 NSHNPKIVWLRETIKNLYAS 317 N P W+RETI A Sbjct: 296 NDDEPGHKWIRETICKRVAQ 315 >UniRef50_A0LD87 Transcriptional regulator, LysR family n=1 Tax=Magnetococcus sp. MC-1 RepID=A0LD87_MAGSM Length = 322 Score = 289 bits (740), Expect = 1e-76, Method: Composition-based stats. Identities = 80/321 (24%), Positives = 135/321 (42%), Gaps = 23/321 (7%) Query: 1 MKKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPL 60 MK ++ DLNLL+ LM ER VT+A + + +T +A+S +L +LR FDDPLFV + Sbjct: 6 MKHNLNKFDLNLLVAFDTLMTERGVTRAGRALGITQAAMSNTLRRLRELFDDPLFVKTGS 65 Query: 61 GLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTP--RGLKFELAAESPLMMIMLNALSKQ 118 + PTP + + +A ++ L++ P F L +++ L + Sbjct: 66 SMEPTPRAIELSTPVALALEEVRKALNQ-EGFDPMMASENFRLGMIDYASAMLMPGLVRH 124 Query: 119 IYQRYPQATIKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFS 177 + Q P+A +++ + D + + RG VD+ FS +P + LFS Sbjct: 125 MSQVAPRAKMQVVDVGGDEEVANLERGAVDLVFSR----------FQWVPPKVCINRLFS 174 Query: 178 DVPCVWLRKDHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLP 236 +HP + + ++D FL H+ D +D L E+G +R I L Sbjct: 175 MEYVAVFCPNHPGVEGGSLSMDAFLASRHVHYYPRGMDNTVVDETLAEMGEKRNIIGKLA 234 Query: 237 EFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHK 296 F M A +++ + + L + LP K + L WH Sbjct: 235 SFGMLPAMLASS-HVMAVMPEGAAKVVARPLGLRVEKLPF-------KTPLLRMALAWHP 286 Query: 297 RNSHNPKIVWLRETIKNLYAS 317 R +P VW R+ +K + Sbjct: 287 RTDRDPSHVWFRQQVKFVLKE 307 >UniRef50_A9FW21 Transcriptional regulator, LysR family n=2 Tax=Myxococcales RepID=A9FW21_SORC5 Length = 333 Score = 288 bits (738), Expect = 2e-76, Method: Composition-based stats. Identities = 83/312 (26%), Positives = 135/312 (43%), Gaps = 18/312 (5%) Query: 4 SITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLS 63 I +++LNLL L+ L+ E SV+ AA+R +V+ SA+S SLA+LR F DPL V GL+ Sbjct: 21 DIRSINLNLLPALEALLVEGSVSGAARRAHVSQSAMSHSLARLRELFGDPLLVPLGRGLT 80 Query: 64 PTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQIYQ 121 PTP + + L + L P PR F +A + L + + + Sbjct: 81 PTPRALQLRAALPAAFEHLRRALASPEPFDPRTSARTFRVATIDYFELTTLPDVLDHLGE 140 Query: 122 RYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPC 181 P +++ + D A+ G++D+ G + + L+ D Sbjct: 141 HAPFVRLEIERFSPDVTPALVLGDIDLALFGASQPVPA--------AGLRRAPLYQDPFA 192 Query: 182 VWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQS 241 V RK HPA+ + +LDT++ H+ + E A+D L LG+ R +A+ LP F + Sbjct: 193 VMARKGHPAIKRRLDLDTYVALGHVLVSVEGHRGGAVDRALARLGKTRRVALRLPHFMSA 252 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 D LL Q +L L + A P +Q +W +R+ + Sbjct: 253 PLAVRSSD-LLCTIPSSVAQRARELFGLRVFAPPFELPAAQ-------VVAVWSQRHDDD 304 Query: 302 PKIVWLRETIKN 313 P W R+ + Sbjct: 305 PAQRWFRDLFFS 316 >UniRef50_A6VUW1 Transcriptional regulator, LysR family n=2 Tax=Marinomonas RepID=A6VUW1_MARMS Length = 321 Score = 287 bits (736), Expect = 3e-76, Method: Composition-based stats. Identities = 79/313 (25%), Positives = 152/313 (48%), Gaps = 19/313 (6%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 ++ +DLNLL Q+L++E +VTKAA R+NV+ AVS+SL++LR F+DPLF+ + GLS Sbjct: 21 LSDIDLNLLYVFQVLIEELNVTKAATRLNVSQPAVSRSLSRLRDVFNDPLFIRTSHGLSA 80 Query: 65 TPLMVSMEQNLAEWMQMSNLLLDKP-HHQTPRGLKFELAAESPLMMIMLNALSKQIYQRY 123 T + LA+ ++ L+ +F L+ + +L + + Q+ Sbjct: 81 TAKTQDLAPLLADTLKGLESLIQPSEFTPQSSKRRFILSTTDFGTLTVLPKILDKFRQKA 140 Query: 124 PQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVW 183 P A + +++W+ D + + + +D+ + P P I L SD Sbjct: 141 PDAILDVKSWNEDMVAELDQTNIDVAVAVLSKEP---------PAGIRAMRLKSDRMVCL 191 Query: 184 LRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 RK+HP + L+++L+ H+ + + + +A+D L+++G +R +++ LP F + Sbjct: 192 ARKNHPRIEGKLTLESYLQVSHVQVVLGRREYFAVDRELEKMGHKRHVSVHLPNFVPAAR 251 Query: 244 MAAQPDNLLLATAPRYCQYYNQL-HQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 + D LLL + + ++ + LP E ++++WH+R H+ Sbjct: 252 VVMDSD-LLLTVPKLFAEDMAATVSEIVVHELPFA-------SREFDYSMIWHERFQHDA 303 Query: 303 KIVWLRETIKNLY 315 VW R ++ + Sbjct: 304 AHVWFRGLLRQAF 316 >UniRef50_A9AQZ4 Transcriptional regulator, LysR family n=24 Tax=Burkholderiaceae RepID=A9AQZ4_BURM1 Length = 327 Score = 286 bits (734), Expect = 5e-76, Method: Composition-based stats. Identities = 71/316 (22%), Positives = 127/316 (40%), Gaps = 22/316 (6%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 + LDLNL+ L L R+V++A + + V+ VS +L +LRA+F DPLFV + G+ P Sbjct: 20 MDALDLNLIPYLVALDDTRNVSRAGELLGVSQPRVSTALGRLRAYFGDPLFVRTSRGMEP 79 Query: 65 TPLMVSMEQNLAEWMQMSNLLLDKPHHQTPR--GLKFELAAESPLMMIMLNALSKQIYQR 122 TP +++ + + L PH P F +A ++ L L + Q Sbjct: 80 TPRALALLPAARDALAQIERGLVAPHDFDPAASTHTFSIALSDVGEIVFLPKLLQAFAQC 139 Query: 123 YPQATIKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPC 181 P A ++ + +D + + G +D+ + LF+ Sbjct: 140 APHANLRSVSLPHDEVGRGLEAGSIDLAVGYFPDLD---------GNNFFQQRLFTHRFV 190 Query: 182 VWLRKDHPA-LHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQ 240 +R+ HP + + ++ FL H + E L+ L + +R + P F Sbjct: 191 CLMRRGHPLEQARPFTVEQFLESGHAVVRAEGRSQEVLEKYLAKQRMQRRAVLETPHFMS 250 Query: 241 SLFMAAQPDNLLLATAPRYCQ-YYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 F+ ++ D L+AT P Y H + E WH++ Sbjct: 251 LPFILSRTD--LIATVPHAIGYAYAAEHAF------IVPVEPPLPLPRFDLKQHWHRKFH 302 Query: 300 HNPKIVWLRETIKNLY 315 ++P+ WLR + +L+ Sbjct: 303 NDPRTAWLRGVVASLF 318 >UniRef50_A5F4D9 Transcriptional regulator, LysR family n=68 Tax=Gammaproteobacteria RepID=A5F4D9_VIBC3 Length = 327 Score = 286 bits (732), Expect = 9e-76, Method: Composition-based stats. Identities = 99/309 (32%), Positives = 164/309 (53%), Gaps = 9/309 (2%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 + +DLNLL+CL++L++E SVT+AA R+ ++ SAVSKSLAKLR FDDPLFV + GL+ Sbjct: 20 LARIDLNLLVCLKVLIEELSVTRAAARLCLSQSAVSKSLAKLREQFDDPLFVRTSYGLNA 79 Query: 65 TPLMVSMEQNLAEWMQMSNLLLDKP-HHQTPRGLKFELAAESPLMMIMLNALSKQIYQRY 123 TP + ++ L + LL +F++AA + +++ I++ Sbjct: 80 TPKALFLKPKLDVLVNQLELLTQPAHFSPQSSEYRFQIAAVESVYPLIMPYFLPTIFRHG 139 Query: 124 PQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVW 183 P +I W + + GE+D G +G++ +L P I + ++ D Sbjct: 140 PHLSISTHAWTEQTFRKLQVGELDFGLTGKDIDINDAKLTLLPPADICEQEIYRDNQRCV 199 Query: 184 LRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 +R+ HP L WNL ++L H+ + + +D W LD L +LG ER IA+++P+F + Sbjct: 200 VRRGHPVLQYDWNLSSYLNLRHVQVRCDGNDRWLLDYRLADLGYERDIAITVPDFNSAAS 259 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 + D + TAP + ++ Q+ LV LPLP + + +TL WH+ ++P Sbjct: 260 LCTYTDFIF--TAPSHFTHWVAK-QMDLVELPLPMEFP-----PMAYTLFWHRERENDPA 311 Query: 304 IVWLRETIK 312 + WLRE I+ Sbjct: 312 LRWLRELIQ 320 >UniRef50_Q0BPL7 Transcriptional regulators, LysR family n=1 Tax=Granulibacter bethesdensis CGDNIH1 RepID=Q0BPL7_GRABC Length = 308 Score = 286 bits (732), Expect = 9e-76, Method: Composition-based stats. Identities = 76/321 (23%), Positives = 125/321 (38%), Gaps = 23/321 (7%) Query: 2 KKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLG 61 ++++ LDLNLL + ERSVTKAA+ I V SA+S +LA+LR D LFV +P G Sbjct: 5 HRNLSRLDLNLLTAFDAIYTERSVTKAAECIGVGQSAMSHNLARLREALQDELFVRTPSG 64 Query: 62 LSPTPLMVSMEQNLAEWMQMSNL--LLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQI 119 + PTP ++ + + L + + + + +++ L + Sbjct: 65 MEPTPRARAIADTVRNLLWTVQDKLLTTRSFTPATAERIWRIGLADNIESLLMPPLLDMM 124 Query: 120 YQRYPQATIK-LRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSD 178 + P I+ + L+A+ R E+D+G + + P D Sbjct: 125 LKEAPGMRIQAIFTDGLRVLEALDRDELDMGIGVFRHGGNVHKRRNFAP----------D 174 Query: 179 VPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEF 238 L LD + PH+ + D+ L LGR RTI M+ P F Sbjct: 175 SYLCLYDPKQITLEGPITLDQYASLPHVLVSLRGIFHGVADDALSLLGRTRTIVMTTPHF 234 Query: 239 EQSLFMAAQPDNLLLATAP-RYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKR 297 ++ ++ T P + H L + LP ++LWH Sbjct: 235 LSVPYVLRG--APVITTLPGTLARSAASAHGLCVSPLPFEL-------APFRLSMLWHSS 285 Query: 298 NSHNPKIVWLRETIKNLYASM 318 ++P WLR T+ +L M Sbjct: 286 YDNDPAHRWLRNTVASLMDQM 306 >UniRef50_A5V8P8 Transcriptional regulator, LysR family n=1 Tax=Sphingomonas wittichii RW1 RepID=A5V8P8_SPHWW Length = 316 Score = 286 bits (732), Expect = 1e-75, Method: Composition-based stats. Identities = 80/321 (24%), Positives = 136/321 (42%), Gaps = 14/321 (4%) Query: 1 MKKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPL 60 M S+T DLNLL+ L L+ E+SVT+AA+R+ VT AVS SLA+LR F+DPL V Sbjct: 1 MALSLTQFDLNLLVVLDALLTEKSVTRAAERLFVTQPAVSGSLARLRDIFEDPLLVRVGR 60 Query: 61 GLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGL--KFELAAESPLMMIMLNALSKQ 118 + T ++ + E + M L P +F +A M +L + ++ Sbjct: 61 EMELTVRARALAGPVREALLMVKAALGSEESFDPAETKCEFRIAMTDYCSMTILPRIVRE 120 Query: 119 IYQRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSD 178 + R P + + S D + GE+D + E R+ + S P + F D Sbjct: 121 LSARAPGIELAVEGLVNKSFDRLETGEIDFLLTVVE---RTLLMHSRHPDMLRGADAFED 177 Query: 179 VPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEF 238 + DHP + F YP+ ++ + ++ + G +++ A+ P F Sbjct: 178 CYTCVVAADHPF-DGALTPEDFRAYPNATVSFGENTFTTDRAAYEHGGLDQSPALIAPSF 236 Query: 239 EQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRN 298 LF L+ R + + + + L+ P+ ++ L WH R+ Sbjct: 237 SSLLFQLQGT-TLIGTVPNRLAEMFAPMLGVRLLEPPIRLPTLTER-------LNWHVRS 288 Query: 299 SHNPKIVWLRETIKNLYASMA 319 +P W+R I ++ SM Sbjct: 289 DADPGHSWMRNLILDVGRSMG 309 >UniRef50_A9FB16 Transcriptional regulator, LysR family n=3 Tax=Sorangium cellulosum RepID=A9FB16_SORC5 Length = 349 Score = 286 bits (732), Expect = 1e-75, Method: Composition-based stats. Identities = 74/316 (23%), Positives = 132/316 (41%), Gaps = 20/316 (6%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 + ++D +L++ L L+QERSVT+AA+R+ VT ++S +L++LRA F DPL V + Sbjct: 41 MRLPSVDTHLVVALHALLQERSVTRAARRVGVTQPSMSHALSRLRAHFGDPLLVQVGRQM 100 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTP--RGLKFELAAESPLMMIMLNALSKQIY 120 + + + AE ++ + + P F L A L +++L L++ + Sbjct: 101 TLSERARDLLPRAAEAVERLEQVFGQAERFDPRRSTRTFRLVATDNLELLVLPPLTRILA 160 Query: 121 QRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 P ++ RN D + + RGE+D +P L ++ Sbjct: 161 AEAPHVNLRCRNIPPDFAELLRRGELDAKLGRGGP----------VPDGCRSTQLAAEQL 210 Query: 181 CVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQ 240 +R+ HPA + + H+ I D +D L G R + +++ F Sbjct: 211 VCLMRRGHPASRKALTAARYAACEHLMISPHGEDHNVIDQELAARGLRRRVTLTVSHFLV 270 Query: 241 SLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 + F+ + D LLL + R + L + PL TL+W +R+ Sbjct: 271 APFILSGSD-LLLTVSARVAVALARKLDLVVRPCPLE-------ARGYTLTLVWPERSEG 322 Query: 301 NPKIVWLRETIKNLYA 316 + WLR I+ A Sbjct: 323 DEGHSWLRAAIERAVA 338 >UniRef50_B6R1K2 Transcriptional regulator, LysR family n=1 Tax=Pseudovibrio sp. JE062 RepID=B6R1K2_9RHOB Length = 293 Score = 285 bits (731), Expect = 1e-75, Method: Composition-based stats. Identities = 75/313 (23%), Positives = 134/313 (42%), Gaps = 25/313 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +DLNLLL + + ER++T+A+KR+N+T AVS +L +LR F DPLF+ + G+ PT L Sbjct: 1 MDLNLLLVFEAVYSERNLTRASKRLNLTQPAVSNALRRLRDTFQDPLFIRTADGMVPTDL 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPR--GLKFELAAESPLMMIMLNALSKQIYQRYPQ 125 + + + ++M + P F ++ M++L L K++ ++ P Sbjct: 61 AEQLAGRVLDALEMLRS-FESRESFDPAGLSRDFRISISDYNGMLVLPRLLKELAEQAPG 119 Query: 126 ATIKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 +I + + ++ G+VD+ + ++ + YE L+SD Sbjct: 120 VSITTSQIQRAHVSEHLSTGQVDLVLAPKQDV-----------ANLSYEPLYSDDYVGVA 168 Query: 185 RKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 + +L+ + + H+ E +D L +LG++R + + + Sbjct: 169 SAHYGPEGGQMSLEEYCQREHLLFSLEGYGRSTVDVALSKLGKKRKVVLRSSHVHTIPHV 228 Query: 245 AAQPDNLLLATAPRYCQY-YNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 +AT PR Y + +L +LP L WH R H+P Sbjct: 229 LEGS--AFIATLPRLITLDYLKRFELTSFSLPFEL-------KGHEVGLHWHARQHHDPA 279 Query: 304 IVWLRETIKNLYA 316 WLR IK L+A Sbjct: 280 HEWLRGLIKELFA 292 >UniRef50_Q30XG7 Conserved hypothetical transcriptional regulator, LysR family n=1 Tax=Desulfovibrio desulfuricans subsp. desulfuricans str. G20 RepID=Q30XG7_DESDG Length = 309 Score = 285 bits (731), Expect = 1e-75, Method: Composition-based stats. Identities = 82/319 (25%), Positives = 140/319 (43%), Gaps = 19/319 (5%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 I++++LNLL+ L+ L+ E +VT+AA+R+++T S +SK+LA+LR FDDPL V S L Sbjct: 1 MDISSVNLNLLVALKALLDEGNVTRAAERLHITQSGMSKNLAQLRELFDDPLLVRSGNAL 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLD-KPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQ 121 T +E L + + L + + F LA + +L I Sbjct: 61 VLTERARELEGPLEMVLGNVHALFEAQRFDPATCRRSFTLAVTDYVAQYILPDALGAILA 120 Query: 122 RYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPC 181 P I+ W+ DS+ A+ G++D+ L +P +++ + D Sbjct: 121 AAPGIDIQAIGWEPDSMRALAEGKIDMA----------TCLTEGVPASVEQLRVGEDRFA 170 Query: 182 VWLRKDHPA-LHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQ 240 +R HP LD +++ H +I +D VL +LG R I + +P + Sbjct: 171 CLMRAGHPLAAAGAMRLDRYVQADHAAITIGGDKVRIIDRVLGKLGHSRNIRLRVPFYAS 230 Query: 241 SLFMAAQPDNLLL--ATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRN 298 ++ + ++ D LL A R + L PLPF ++++WH R Sbjct: 231 AVEIVSRTDLLLTLPAHVARNVIQARNPSEPALAWAPLPFAVD-----SFEYSIIWHARF 285 Query: 299 SHNPKIVWLRETIKNLYAS 317 +P W+RE + S Sbjct: 286 HGDPGHRWVREMLFAQMQS 304 >UniRef50_A4YPA1 Putative transcriptional regulator, LysR family n=1 Tax=Bradyrhizobium sp. ORS278 RepID=A4YPA1_BRASO Length = 310 Score = 285 bits (731), Expect = 1e-75, Method: Composition-based stats. Identities = 74/318 (23%), Positives = 130/318 (40%), Gaps = 21/318 (6%) Query: 4 SITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLS 63 + +DLNLL+ + LMQ RSV++ A+R+ + + S +L +LRA DPLFV +P G+ Sbjct: 8 DLRDVDLNLLVAFEALMQTRSVSRMAQRLRIGQPSASHALKRLRALLGDPLFVRTPAGMI 67 Query: 64 PTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPR--GLKFELAAESPLMMIMLNALSKQIYQ 121 PTP +++ + + + L PR F + A + ++ + L + Sbjct: 68 PTPHALALAEPIRAILTSIERTLFARASFDPRAERRVFRIGAMDYVQAVIADPLLAVLQA 127 Query: 122 RYPQATIKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 + P + L D D+ ++ RGE+D+ + E+L+ + Sbjct: 128 QAPGCKLILTTTDCDTAGRSLARGEIDLAIGA----------FPQIKAGSHQELLYRERY 177 Query: 181 CVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQ 240 L + +L PH+ + + LD+VL+ G +R +A+S P F Sbjct: 178 ECVFDAKACRLGKRVTRAQWLALPHVIMSVHGDYSGPLDDVLKSSGEQREVAVSTPNFLA 237 Query: 241 SLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 F+ L+ A R + + L LP T++WH R Sbjct: 238 IPFLLRN-KRLIAALPSRMARAFCGRLGLSTCPLPFTAPT-------FDVTMIWHARTGD 289 Query: 301 NPKIVWLRETIKNLYASM 318 P WLR+ I + + Sbjct: 290 EPGAAWLRDQITAICRRI 307 >UniRef50_Q7W2A6 Transcriptional regulator n=3 Tax=Bordetella RepID=Q7W2A6_BORPA Length = 313 Score = 285 bits (730), Expect = 2e-75, Method: Composition-based stats. Identities = 83/315 (26%), Positives = 139/315 (44%), Gaps = 22/315 (6%) Query: 6 TTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPT 65 LDLNLL+ ++ E VT+AA+R+ ++ SAVSK LA+LR F DPLF+ + G+ PT Sbjct: 4 KHLDLNLLMIFDAILAEGHVTRAAERLAMSQSAVSKGLAQLRQAFGDPLFLRASRGVVPT 63 Query: 66 PLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQIYQRY 123 + + + + + N L R F + A + ++L L +++ + Sbjct: 64 HRALEIADQVRQAIAALNSLAGPVTEFDARSAHAHFNIGATDYVSFVLLPGLMRRLQETA 123 Query: 124 PQATIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCV 182 P ++ L + + + + G+VD+ S ++S+ I + LF D Sbjct: 124 PHVSLTLHDMESMMPEEMLLAGKVDLVISS----------VASVNFPIYRQELFRDHYVC 173 Query: 183 WLRKDHPALHQTWNLDTFLRYPH-ISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQS 241 R HPAL ++ F+ H + L + LQ LG R +A+ +P Sbjct: 174 LCRAGHPALADPVPIEQFVSSRHLAMPRQNGARERVLQDTLQRLGVTRDVAVQVPHMLAI 233 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 D L+ A R + + H L ++A PLP + P + LWH R + Sbjct: 234 PATLTATD-LVATMACRVAREFAARHPLQVLAHPLPLP-------DFPVSQLWHDRTRRS 285 Query: 302 PKIVWLRETIKNLYA 316 P WLR+T+ +L Sbjct: 286 PSHQWLRDTVYDLAR 300 >UniRef50_B0BQD1 HTH-type transcriptional activator n=15 Tax=Proteobacteria RepID=B0BQD1_ACTPJ Length = 299 Score = 284 bits (729), Expect = 2e-75, Method: Composition-based stats. Identities = 75/314 (23%), Positives = 132/314 (42%), Gaps = 24/314 (7%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 + I T+DLNLL L+QER+VTKAA+R++VT A+S L +LR F DPLFV G+ Sbjct: 2 RDIRTVDLNLLKAFDALLQERNVTKAAQRLSVTQPAMSAMLNRLRDSFGDPLFVRVQHGI 61 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDK-PHHQTPRGLKFELAAESPLMMIMLNALSKQIYQ 121 PT +++ ++ + N +L + ++A+ + + + Q Sbjct: 62 EPTARALALMPSVKTVLAEVNRMLRPVEFDPQTAEMTIKIASTDYGLEAIGTPFLSHLKQ 121 Query: 122 RYPQATIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 P+ + D D L + +DI + +P + + L ++ Sbjct: 122 LAPKIRVAFLPAQDVDLLAQFEQARIDIALVSTQH----------IPADLHSKPLLTEHY 171 Query: 181 CVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWAL-DNVLQELGRERTIAMSLPEFE 239 +R DHP +Q NLD F + ++ + + D L +LG+ R +++S+ F Sbjct: 172 VCVMRADHPMANQLLNLDNFCELDFAMMSYDGGQFYGVCDEALAKLGKTRRVSVSVNHFS 231 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 + D ++A P ++ L L LPL + WH+R Sbjct: 232 LLPNILRTTD--VVALIPSRLSHH--LTGLICKTLPLEV-------QGFSLQMAWHERTH 280 Query: 300 HNPKIVWLRETIKN 313 +P W+R + Sbjct: 281 QDPAYQWIRNLLVE 294 >UniRef50_Q13YH7 Transcriptional regulator, LysR family n=12 Tax=cellular organisms RepID=Q13YH7_BURXL Length = 317 Score = 284 bits (729), Expect = 2e-75, Method: Composition-based stats. Identities = 77/321 (23%), Positives = 136/321 (42%), Gaps = 24/321 (7%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 S+ +DLNLL Q +++ERS+T+A +R+ ++ A+S SL +LR FDDPLF+ + G+ Sbjct: 13 NSLDQVDLNLLRVFQAIVEERSLTRAGERLALSQPAISYSLGRLRTLFDDPLFIRTRAGM 72 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPR--GLKFELAAESPLMMIMLNALSKQIY 120 PTP+ + + +A + L H P F ++ + L + + ++ Sbjct: 73 QPTPIALELSAIVARALDTVREALRYAEHFDPAVSTRTFRVSLSDAGELAYLPPICEALH 132 Query: 121 QRYPQATIKLRNWD-YDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 Q+ P+ +++ + DA+ +D L +L ++ LF + Sbjct: 133 QQAPRVRLRIEPLPVEEIEDALRASRLDFAIGN----------LPTLTARTRHQALFEET 182 Query: 180 PCVWLRK--DHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPE 237 RK P + +L FL H+ I + ALD+ + G R IA+ LP Sbjct: 183 YVCMTRKRRGLPRAKE-LSLKAFLDASHVQITSVEHSHRALDDEFRTQGVGRHIALELPH 241 Query: 238 FEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKR 297 F + A D L R Q +N+ + LP+ + T+ WH+ Sbjct: 242 FVALPSVLAVTD-LFATLPRRLAQIFNRGGNFQIYELPVTLPIA-------AVTMHWHEH 293 Query: 298 NSHNPKIVWLRETIKNLYASM 318 + VWLR + ++ Sbjct: 294 FDQDEGNVWLRNLMADIVRHF 314 >UniRef50_A1WRT3 Transcriptional regulator, LysR family n=1 Tax=Verminephrobacter eiseniae EF01-2 RepID=A1WRT3_VEREI Length = 315 Score = 284 bits (729), Expect = 2e-75, Method: Composition-based stats. Identities = 75/318 (23%), Positives = 130/318 (40%), Gaps = 20/318 (6%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 ++ +LNLL + + RSV+ AA+ +++T AV+ +L KLR FD+PLFV + G+ Sbjct: 1 MDLSEFNLNLLTFFDAIYRHRSVSAAAQELDLTQPAVTAALNKLRVHFDNPLFVRTSNGM 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDK-PHHQTPRGLKFELAAESPLMMIMLNALSKQIYQ 121 PTP ++ +A + L + P +F++ MM+ L + + + Q Sbjct: 61 HPTPWADALAPKIAHVLDSVRRLDEPTPFQPQSAKNQFKIYVNDIGMMLALPKIVQLLNQ 120 Query: 122 RYPQATIKLRNWDYDS-LDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 P + + + D ++A+ GE+D+ +P + L Sbjct: 121 DAPHTQLTVIDLRQDEVVNALDVGEIDLAIGY----------FVGVPNWARQQHLRDTSY 170 Query: 181 CVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQ 240 +RKDHP++ T L +L H S LD L + G R IA+ +P Sbjct: 171 VCAMRKDHPSIGDTMTLTQYLNARHAMYWTHGSTYGRLDEALAKRGFSRDIAVRIPRLGA 230 Query: 241 SLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 F+AA D + + + L + LV +P+ WH+R Sbjct: 231 IPFLAAFSDFV-VTIPEDLGLLFRDLIPIKLVPVPISLP-------SFQVKQYWHERLHA 282 Query: 301 NPKIVWLRETIKNLYASM 318 + WLR I + + Sbjct: 283 DSAHKWLRTLILQIMKQL 300 >UniRef50_Q2IYM8 Transcriptional regulator, LysR family n=2 Tax=Rhodopseudomonas palustris RepID=Q2IYM8_RHOP2 Length = 317 Score = 284 bits (728), Expect = 3e-75, Method: Composition-based stats. Identities = 69/316 (21%), Positives = 131/316 (41%), Gaps = 21/316 (6%) Query: 4 SITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLS 63 ++ +DLNLL+ + +++ AA+++ ++ AVS +L +LR FDDPLFV + G+ Sbjct: 5 NLRNVDLNLLIVFDAVYATGNISHAARQLALSQPAVSNALTRLREHFDDPLFVRAGRGVK 64 Query: 64 PTPLMVSMEQNLAEWMQMSNLLLDKPHHQT--PRGLKFELAAESPLMMIMLNALSKQIYQ 121 PT M + + E +++ D F + PL +++ + ++I Sbjct: 65 PTLRSQQMIEPVREALRLIRQQFDGDRSLDLGSYKRTFRIVIVDPLEAMLMPTMLREISA 124 Query: 122 RYPQATIKLR-NWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 PQ TI+ R W+ + DAI G +D+ + P Sbjct: 125 HAPQVTIESRPPWNTNVADAIIAGTLDLACYTFPVSAPGLVFKTICPCDH---------- 174 Query: 181 CVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQ 240 + R+ HP + T + +TFL +++ E +D + G R IA + + Sbjct: 175 VIVARRGHPKIGATLDAETFLSLAQVALIPELRGHTNIDRDITTRGGNRRIAYMVNKVWS 234 Query: 241 SLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 + D L+ R+ + L + P+P + ++WH++N+ Sbjct: 235 MPGVVGSTD-LVTVMPRRFAELMAPKFGLQIFESPIPI-------SPQDYHMIWHEKNTD 286 Query: 301 NPKIVWLRETIKNLYA 316 +P WLR+T+ Sbjct: 287 DPGHKWLRDTMVKAMQ 302 >UniRef50_B2JSH4 Transcriptional regulator, LysR family n=2 Tax=Burkholderiaceae RepID=B2JSH4_BURP8 Length = 309 Score = 284 bits (727), Expect = 3e-75, Method: Composition-based stats. Identities = 60/315 (19%), Positives = 114/315 (36%), Gaps = 20/315 (6%) Query: 4 SITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLS 63 + DLNLL L + + KAA+ + ++ A S +L +LR D LFV + G+ Sbjct: 7 HMDNFDLNLLRIFDALWRHGHLGKAAEELTLSQPAASYALKRLREELGDVLFVKTGSGMQ 66 Query: 64 PTPLMVSMEQNLAEWMQMSNLLL--DKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQ 121 PTP + + + + + F +A M+ L L +++ Sbjct: 67 PTPRAILLAPVVQSVLADIRERVLKAPNFVPDKAQRTFTIALSDVGEMVSLPRLLQRVTS 126 Query: 122 RYPQATIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 P + ++ L ++ R EVD+ + + L Sbjct: 127 LAPSVNVTTVSFAPKQLLSSLQRSEVDLAIGYFPDLDGV---------DVFQQHLVRHSF 177 Query: 181 CVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQ 240 +R++HPA+ F PH + E ++ L+E G R + P F Sbjct: 178 VCLVRQNHPAVQGRLTKKLFCELPHAVVQVEGRRQEIVEQFLKENGIRRREVLHTPHFLS 237 Query: 241 SLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 A D L++ + + + ++ +L ++ P K WH+ Sbjct: 238 IPMTIAMTD-LVVTVSSDVGEIFARIAELEILDPP-------YKMPRFDVNQYWHRSQHD 289 Query: 301 NPKIVWLRETIKNLY 315 +P W+R ++ L+ Sbjct: 290 DPGNRWMRGLVRELF 304 >UniRef50_D0LKM3 Transcriptional regulator, LysR family n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LKM3_HALO1 Length = 307 Score = 284 bits (727), Expect = 3e-75, Method: Composition-based stats. Identities = 77/312 (24%), Positives = 127/312 (40%), Gaps = 22/312 (7%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 ++ ++LNLL+ L L+ ERSV++AA+R V+ A+S+SL +LRA FDD L L Sbjct: 6 LSEINLNLLVSLDALLTERSVSRAARRTGVSQPAMSQSLRQLRAIFDDALLARDRGVLVL 65 Query: 65 TPLMVSMEQNLAEWMQMSNLLLDKPHHQTP--RGLKFELAAESPLMMIMLNALSKQIYQR 122 TP + L + +LD P +F +A + +L L ++ + Sbjct: 66 TPAAERLMVPLRHALVAVQRVLDGEKPFDPGRAERRFTIAVGDFAAVTLLPPLLERASRE 125 Query: 123 YPQATIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPC 181 P +R + + + GE D+ + ++L+ D Sbjct: 126 APGIGFDVRPAEPTRLFERLATGEFDLVIGAKL----------DASGDFMRQLLYRDGFV 175 Query: 182 VWLRKDHP-ALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQ 240 R+DHP +L+ + PH+ I +D +L E G++R IA+ +P F Sbjct: 176 CMARRDHPELSGDALDLERYAALPHVLISPTGEGPSVVDRLLAERGKQRRIALRIPYFLA 235 Query: 241 SLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 + M + D +L A + H L L PL LWH+R Sbjct: 236 APLMVVRSDLVLTA-PRSVAGAFASTHALALFEPPLELP-------SFGVYQLWHQRYQS 287 Query: 301 NPKIVWLRETIK 312 + WLRE + Sbjct: 288 DDAHRWLRELVA 299 >UniRef50_Q08NF6 Transcriptional Regulator, LysR family n=1 Tax=Stigmatella aurantiaca DW4/3-1 RepID=Q08NF6_STIAU Length = 322 Score = 284 bits (727), Expect = 4e-75, Method: Composition-based stats. Identities = 74/317 (23%), Positives = 138/317 (43%), Gaps = 21/317 (6%) Query: 4 SITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLS 63 ++++D NLL+ L L+QE V +A+KR+ ++PSA S +LA+LR D L V + L Sbjct: 14 QLSSIDTNLLVVLDALLQEGHVGRASKRVALSPSATSHALARLRELLGDELLVRAGRQLV 73 Query: 64 PTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPR--GLKFELAAESPLMMIMLNALSKQIYQ 121 TP +++ + + M+ +L P F + + ++L L + + Sbjct: 74 LTPRAIALAPQVRQLMEQMERILRPAESFHPAKLEHTFRVLTTDHIEFVLLRPLDRFLTD 133 Query: 122 RYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPC 181 P+ + R D+++ + G D+ F + + LP I + LF D Sbjct: 134 EAPRVILHNRPMVPDAVEELRGGRADLAFG----------VFTDLPDDISSQELFKDRFV 183 Query: 182 VWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQS 241 +R+ HP L + L F H+ + + T +D +L E +R + +L F + Sbjct: 184 TLVREGHPVLARPLTLKRFAELDHVLVAPRGTATSRMDLLLAERNLKRRVVRTLGSFLSA 243 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 F AQ D+ + + R L L ++ P+ ++ T +WH+R + Sbjct: 244 PFFVAQSDH-AVTLSARIADALAPLLGLRVLEPPIAYE--------YTLTQIWHRRWDAD 294 Query: 302 PKIVWLRETIKNLYASM 318 P WLR+ + + + Sbjct: 295 PAHAWLRQLTARVASGL 311 >UniRef50_A3Y808 Transcriptional regulator, LysR family protien n=1 Tax=Marinomonas sp. MED121 RepID=A3Y808_9GAMM Length = 301 Score = 283 bits (726), Expect = 4e-75, Method: Composition-based stats. Identities = 71/315 (22%), Positives = 129/315 (40%), Gaps = 19/315 (6%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 + +DLNLL+ L + +SV+ AA + ++ SA S +A+LR F+D LFV + Sbjct: 1 MDLHQIDLNLLILFDALYRHQSVSLAADEVCISQSAFSHGIARLRKRFNDELFVRVNNQM 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPR--GLKFELAAESPLMMIMLNALSKQIY 120 PTP + Q+L + + + ++ H +F+++A +L L Q+ Sbjct: 61 QPTPRAEEIAQHLHQALPFIHNAINDSDHFDASMDKTEFKISATDYTEFSLLPKLVGQVS 120 Query: 121 QRYPQATIKLR-NWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 + P + + L + EVD S I++ SD Sbjct: 121 HQAPNIKLTVIGAKAPQPLTHLENNEVDFALGFSHEIEASSL--------IEHHTWLSDS 172 Query: 180 PCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFE 239 C RK+HPAL Q +LDTFL H+ + +D VL + +R +++ LP Sbjct: 173 YCTVARKNHPALTQGLDLDTFLELKHVRVSPWGEKQGIVDQVLAQHKLKRHVSLQLPSVL 232 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 + D L+L + + ++ + P+ + + WHK N+ Sbjct: 233 VAPHSIIHSD-LILTMPRIVAEQVAKQVEIEIFTPPISIP-------DYHLNIYWHKINA 284 Query: 300 HNPKIVWLRETIKNL 314 W+++ ++L Sbjct: 285 DKASFKWMKQLFQSL 299 >UniRef50_B7WQP0 Transcriptional regulator, LysR family n=1 Tax=Comamonas testosteroni KF-1 RepID=B7WQP0_COMTE Length = 295 Score = 283 bits (726), Expect = 5e-75, Method: Composition-based stats. Identities = 68/310 (21%), Positives = 126/310 (40%), Gaps = 20/310 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +D+ LL + + RSV++A + + + ++VS +L +LR F+D LFV + G+ PTP Sbjct: 1 MDMKLLSVFDEIYKTRSVSRAGENLGLAQTSVSLALGRLRRAFNDQLFVRTSEGMLPTPR 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPR--GLKFELAAESPLMMIMLNALSKQIYQRYPQ 125 ++ L + +++ + P F LA + L AL ++ P+ Sbjct: 61 AAALVPQLRQALELLQSATRQQAEFDPASSSRAFRLAMTDISHLEFLPALMNKLGNIAPK 120 Query: 126 ATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 +++ D+ + G+ D+ + L + LF D +R Sbjct: 121 VRVEVLRITADTARLLEAGDADLAIGY----------MPELDAGFYQQKLFRDGFACVVR 170 Query: 186 KDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMA 245 + HP + + F H+ I + ++ L+ G +R +A+SLP + Sbjct: 171 RTHPRIDDNLTMTRFKTERHVIITAPGTGNEIVEQELKRQGAQRNVALSLPTLPGVGNLL 230 Query: 246 AQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIV 305 A D L+ R Q ++ Q+ +A P E WH+R +P Sbjct: 231 AHTD-LIATVPHRIAQTLVKIAQVKAIASPYRLP-------EFAIKQHWHERYQQDPANR 282 Query: 306 WLRETIKNLY 315 WLR T+ L+ Sbjct: 283 WLRSTLAELF 292 >UniRef50_C9NXV6 Transcriptional regulator LysR family n=1 Tax=Vibrio coralliilyticus ATCC BAA-450 RepID=C9NXV6_9VIBR Length = 303 Score = 283 bits (726), Expect = 5e-75, Method: Composition-based stats. Identities = 70/317 (22%), Positives = 127/317 (40%), Gaps = 21/317 (6%) Query: 4 SITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLS 63 +I+ ++L+ L LQ++ + +++T+A +R +T SAVS +L KLR F+D L + + Sbjct: 3 NISDIELSQLRLLQIIFETKNLTQAGERAGLTQSAVSHTLKKLRHSFNDSLVIRQGNKMV 62 Query: 64 PTPLMVSMEQNLAEWMQMSNL--LLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQ 121 TP S++ +L W+ L + F +A + I+ LS+ + Sbjct: 63 LTPRAESLQTSLGRWLNDFERNILFQEVFDPLTSDRTFYIATSDLVEHILAPHLSRHFGR 122 Query: 122 RYPQATIKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 P I R + +L I GEVD S ++ S + L+ D Sbjct: 123 IAPNIRIVFRKIEKRALASQIESGEVDFAIS----------VIDSTHPNLMVRTLYRDDF 172 Query: 181 CVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQ 240 +R HP L+ F +YPH+ + +D+ L+ LG R + + F Sbjct: 173 VSVVRAGHPLLNSKIKAKDFCQYPHVLASTGNDNRGMVDDALEGLGLSRVMQYKVANFSS 232 Query: 241 SLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 + ++ D +L A + + P+ + + WH +N Sbjct: 233 APYIVESSDAILTA-PRTFVDLIAGKFNVSSFTPPVELE-------SYAMKMYWHIKNKD 284 Query: 301 NPKIVWLRETIKNLYAS 317 + W RE I + A+ Sbjct: 285 DQANRWFREQIAEITAA 301 >UniRef50_Q8YZV2 Transcriptional regulator n=2 Tax=Nostocaceae RepID=Q8YZV2_ANASP Length = 305 Score = 283 bits (725), Expect = 6e-75, Method: Composition-based stats. Identities = 70/319 (21%), Positives = 134/319 (42%), Gaps = 22/319 (6%) Query: 4 SITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLS 63 ++++DLNLL+ ++L +ERSVT AA+R+ + A+S +LA+LR F D LF+ + Sbjct: 5 DLSSIDLNLLVTFEVLFEERSVTAAAQRLYLGQPAMSAALARLRILFQDELFIRIGREMQ 64 Query: 64 PTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQIYQ 121 PT + + ++ +Q L+ P F + + ++L L + Q Sbjct: 65 PTAKALEISPGISVALQQIRQTLESSQTFDPTTSKHTFAIGSSDYTSYVVLPKLLEVCRQ 124 Query: 122 RYPQATIKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 P +L ++ DS+ D + + E+ + L + P LF + Sbjct: 125 VAPSIDFRLIGFEKDSVGDLLEQREIHVALG----------LFQNPPRQTRQMPLFEEHF 174 Query: 181 CVWLRKDHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFE 239 R+ HP + ++ +TF R P + D +D VL + +R + ++ P Sbjct: 175 VGLCRRGHPVVTQESMTPETFARLPQALFTLRRDDIGEIDKVLAQYNLQRRVVLTTPHLL 234 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 + + D L+ R + L + LP+ K ++LW K Sbjct: 235 ILPTVISSSD-LVTVIPSRLLTPFAYKDTLEIFELPV-------KTEPWMISMLWSKLTD 286 Query: 300 HNPKIVWLRETIKNLYASM 318 + +WLR+ +K++ + Sbjct: 287 QDQASIWLRQMLKSVCEGI 305 >UniRef50_Q13QG3 Transcriptional regulator, LysR family n=9 Tax=Proteobacteria RepID=Q13QG3_BURXL Length = 316 Score = 283 bits (725), Expect = 6e-75, Method: Composition-based stats. Identities = 71/314 (22%), Positives = 125/314 (39%), Gaps = 21/314 (6%) Query: 9 DLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLM 68 DLNLL + RS+T A +R+ +T AVS +L +LRA FDDPLFV +P G+ PT Sbjct: 10 DLNLLRVFLAISDLRSLTAAGERLGLTQPAVSHALRRLRALFDDPLFVRTPTGMVPTDAA 69 Query: 69 VSMEQNLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + L + + N+ + + P F ++ L L + + Sbjct: 70 LRLHAPLTQAFGIINVAVQQIARFDPATAQRVFRVSMSDMSEFYFLPPLLSMLDRSARGI 129 Query: 127 TIKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 +++ N DS+ A+ GE+D+ + L + LF D +R Sbjct: 130 RLEIANVSVDSVSSAMRSGEIDLALGY----------VPGLDTGCVSKTLFVDEHVCVVR 179 Query: 186 KDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMA 245 HP Q + ++ + ++ L+EL R I + LP F + + Sbjct: 180 AGHPLRKQKPTKEDLANLRYVYASTNATGHRMVEQWLEELNLRRDIVLRLPHFVVAPEIV 239 Query: 246 AQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIV 305 D ++ Q +N+ ++ LP + + H + S +P I Sbjct: 240 QHTDLAMI-FPRSIAQRFNRNKAFRILPLPFALP-------PIEIQVHSHSQFSADPGIA 291 Query: 306 WLRETIKNLYASMA 319 WL + I +++ A Sbjct: 292 WLLDAIYDMFHQPA 305 >UniRef50_A6EYC4 LysR family regulatory protein n=1 Tax=Marinobacter algicola DG893 RepID=A6EYC4_9ALTE Length = 300 Score = 283 bits (724), Expect = 8e-75, Method: Composition-based stats. Identities = 69/319 (21%), Positives = 136/319 (42%), Gaps = 21/319 (6%) Query: 1 MKKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPL 60 MK ++ ++DLNLL +M+ +++AA + ++ A+S +L +LR DPLFV + Sbjct: 1 MKLNLRSVDLNLLPVFDAIMEAGQLSRAADSLGMSQPAISAALQRLRHTLGDPLFVRTHQ 60 Query: 61 GLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTP--RGLKFELAAESPLMMIMLNALSKQ 118 G+ PTP + ++L++ + LD + P +F + + M++L L + Sbjct: 61 GMVPTPRARELHRSLSQQLGAMRDTLDPANRFVPGTSQRRFRVLSNDYFEMVVLPTLLTR 120 Query: 119 IYQRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSD 178 + P +++ D + E D+ + ++ + +VL ++ Sbjct: 121 LRSEAPNVVVEVALAGDDMPQRLYTAEADLAV----------DAFATENDRLRRQVLLAE 170 Query: 179 VPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEF 238 V RKDHP L + FL H+ + +++ LD +L E G +R + +F Sbjct: 171 RLAVVARKDHPDLWDDCSKQQFLDAEHVVL-PDRNRRLPLDQILNEPGWQRRTGARVTQF 229 Query: 239 EQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRN 298 L ++ D + R Q Y + L + P+ +P LLW Sbjct: 230 ASMLATCSRSDMIA-TVPERLAQQYARAFGLKTLPFPVEVP-------PLPVYLLWAPVM 281 Query: 299 SHNPKIVWLRETIKNLYAS 317 ++P +W R+ + ++ Sbjct: 282 DNDPAHIWFRQRLMESVST 300 >UniRef50_Q1XGL2 Transcriptional activator NahR n=3 Tax=root RepID=Q1XGL2_PSEPU Length = 374 Score = 282 bits (723), Expect = 1e-74, Method: Composition-based stats. Identities = 68/298 (22%), Positives = 112/298 (37%), Gaps = 21/298 (7%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 + LDLNLL+ L+ +R V+ A+ + +T AVS +L +LR DPLFV + G+ Sbjct: 1 MELRDLDLNLLVVFNQLLVDRRVSITAENLGLTQPAVSNALKRLRTSLQDPLFVRTHQGM 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTP--RGLKFELAAESPLMMIMLNALSKQIY 120 PTP + + + M L P F LA + + L + Sbjct: 61 EPTPYAAHLAEPVTSAMHALRNALQHHESFDPLTSERTFTLAMTDIGEIYFMPRLMDVLA 120 Query: 121 QRYPQATIK-LRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 + P I +R+ + A+ G VD+ LL +L L + Sbjct: 121 HQAPNCVISTVRDSSMSLMQALQNGTVDLAVG----------LLPNLQTGFFQRRLLQNH 170 Query: 180 PCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFE 239 RKDHP + L+ F Y H+ + + +D + +G R I + +P F Sbjct: 171 YVCLCRKDHPVTREPLTLERFCSYGHVRVIAAGTGHGEVDTYMTRVGIRRDIRLEVPHFA 230 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKR 297 + + D LL R + L + P+ E+ + WH + Sbjct: 231 AVGHILQRTD-LLATVPIRLADCCVEPFGLSALPHPVVLP-------EIAINMFWHAK 280 >UniRef50_C4UEX0 Lys-R type regulatory protein n=1 Tax=Yersinia ruckeri ATCC 29473 RepID=C4UEX0_YERRU Length = 299 Score = 282 bits (723), Expect = 1e-74, Method: Composition-based stats. Identities = 73/316 (23%), Positives = 130/316 (41%), Gaps = 21/316 (6%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 S+ +DLNLL+ L +L+ ER V++AAKR+ ++ AVS +L +LR DD L V G Sbjct: 2 NSLRAIDLNLLVILDVLLSERHVSRAAKRLYMSQPAVSHALNRLRYLLDDELLVRVAGGF 61 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLD-KPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQ 121 T ++ + L E ++ ++ +F +A ++L L +++ Q Sbjct: 62 QLTRRAAALIEPLKEVLEKVRYIIGTGNFEPALATQRFRIALSDYGAAMVLPGLLQRLRQ 121 Query: 122 RYPQATIKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 + P + + + + + + G++D+ + LP + LF + Sbjct: 122 QAPGIDLVVEQASREQMIEQVMAGQLDLALG----------VFPDLPADMTASRLFEEHF 171 Query: 181 CVWLRKDHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFE 239 + + +P + + LD +L PH+ + ++ L ELG R +A +P F Sbjct: 172 VCVIDQANPLARKKYFTLDDYLVQPHLLVSMRGESVGEVETALAELGVRRRVAAIMPHFL 231 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 + A D LLL A R + L + LP F +WH RN Sbjct: 232 LAPQALAGTD-LLLTVASRVVTIQQESMNLQRLTLPFTVP-------NFDFVQIWHNRNH 283 Query: 300 HNPKIVWLRETIKNLY 315 WLR+ + Sbjct: 284 GKEDHRWLRQQVAESC 299 >UniRef50_Q1GMN1 Transcriptional regulator, LysR family n=1 Tax=Ruegeria sp. TM1040 RepID=Q1GMN1_SILST Length = 319 Score = 281 bits (721), Expect = 2e-74, Method: Composition-based stats. Identities = 71/324 (21%), Positives = 128/324 (39%), Gaps = 29/324 (8%) Query: 1 MK-KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSP 59 M K++ +DLNLL L ERSVTKAA + ++ AVS +L +LR DD LF+ S Sbjct: 7 MHQKNLNAIDLNLLKVFSALAAERSVTKAANSVGLSQPAVSHALRRLRDLMDDELFIRST 66 Query: 60 LGLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPR--GLKFELAAESPLMMIMLNALSK 117 G+ PT + + ++M + P + L +++ L+ Sbjct: 67 DGMQPTERCRELAPAIDASLKMLQDAMTVKDDNDPANLRATYRLGMNDLFSTLLVPGLTA 126 Query: 118 QIYQRYPQATIKLRNW------DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAID 171 ++ ++ P +++ + D+ + RG +D+ P D Sbjct: 127 RVAKQAPNVSLRFLHSMAINQNVDDAYSDLERGRIDLTVIQDF----------DTPSRFD 176 Query: 172 YEVLFSDVPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTI 231 E+L + R HP +++ + HI ++ +D L ++G R I Sbjct: 177 RELLGASEFVCVARAGHPVFQPGLSMEQYTSLGHIMFTTLDAEYSRIDEALSKMGIRRRI 236 Query: 232 AMSLPEFEQSLFMAAQPDNLLLATAPRYCQYYN-QLHQLPLVALPLPFDESQQKKLEVPF 290 + +P + +L A D L+ T PR + Q L + LP + Sbjct: 237 ELRVPHYSAALSATALTD--LVYTVPRILAQHAEQAFGLQVSELPFEAPVRK-------I 287 Query: 291 TLLWHKRNSHNPKIVWLRETIKNL 314 +WHK + + WLR + ++ Sbjct: 288 FQVWHKTRTKDFGHQWLRNVVSDV 311 >UniRef50_B0C7Y6 Transcriptional regulator, LysR family n=1 Tax=Acaryochloris marina MBIC11017 RepID=B0C7Y6_ACAM1 Length = 305 Score = 281 bits (720), Expect = 2e-74, Method: Composition-based stats. Identities = 75/315 (23%), Positives = 134/315 (42%), Gaps = 20/315 (6%) Query: 6 TTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPT 65 +DLNLL + +M E +V++AA+R+N+T AVS +L +LR +D LF+ P G+SPT Sbjct: 3 NQIDLNLLHIFEAVMMELNVSRAAERLNMTQPAVSHALRRLRRITNDELFLKVPSGVSPT 62 Query: 66 PLMVSMEQNLAEWMQMSNLLLDKP-HHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYP 124 P + + + E + L L P F LA + + L L + P Sbjct: 63 PKALELWGPIREGLVHIRLALSPPSFEPFSSMQTFTLAMADYSVALFLPKLLPILAHSAP 122 Query: 125 QATIKLRN-WDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVW 183 I++ + ++ + + E+D+ + + + D Sbjct: 123 NINIRIVPNTNINAAKLLEQSEIDLAMGRFYRSTVR----------LRVQEIIGDRYICI 172 Query: 184 LRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 +RKDHP H+ L +++ H+ + T +D L+E+ R IA+++ +F Sbjct: 173 MRKDHPLAHKRLTLKQYIKADHLLVTLTGEATGLVDKQLREMDLSRRIALTVNQFTLVPE 232 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 + A D L+ A R + L + LPL K ++WH+R+ +P Sbjct: 233 LIAGSD-LISAIPLRMVERNPFRTDLHITELPL-------KIAPAFLQMMWHERSQVDPA 284 Query: 304 IVWLRETIKNLYASM 318 WLR + + + Sbjct: 285 HEWLRSQLFEIVQDL 299 >UniRef50_Q2G901 Transcriptional regulator, LysR family n=2 Tax=Alphaproteobacteria RepID=Q2G901_NOVAD Length = 302 Score = 281 bits (719), Expect = 3e-74, Method: Composition-based stats. Identities = 68/320 (21%), Positives = 132/320 (41%), Gaps = 21/320 (6%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 LDLNLL+ LM+ RSVT+AA+RI +T A S +L +LR +F D + V + Sbjct: 1 MRFKGLDLNLLVVFDALMETRSVTRAAERIGLTQPATSAALRRLRDYFRDEIVVAVGKRM 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTP--RGLKFELAAESPLMMIMLNALSKQIY 120 PTP ++ + + ++ + P P +F + +M+ +L L ++ Sbjct: 61 HPTPFAEALHPQIQQALRRVERAISMPTEFDPSTSTRRFRIIGSDYIMVAVLVPLIERFA 120 Query: 121 QRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 + P I++ + S+ + G D+ + EVLF + Sbjct: 121 RTAPGVRIEIIQPNEHSVAELEAGRADLLVTPEPFLAS----------WHPSEVLFDEEQ 170 Query: 181 CVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWAL-DNVLQELGRERTIAMSLPEFE 239 V +P + D F H+++ + + T A D+ L +GRER + +++ F Sbjct: 171 VVVGWAQNPIFARGVTADDFYAAGHVTVAFGANRTPAFADSALSRMGRERRVEVTVGSFA 230 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 + + L + R + + L +P F Q+ + +H+ + Sbjct: 231 SAPWFIEGTSRLAV-LHERLVRQIARRFNLAWARMPFDFPTMQEM-------MQFHEARA 282 Query: 300 HNPKIVWLRETIKNLYASMA 319 + + WLR+ ++ + + A Sbjct: 283 EDAGLAWLRQQMREVASENA 302 >UniRef50_Q89IY7 Transcriptional regulatory protein n=1 Tax=Bradyrhizobium japonicum RepID=Q89IY7_BRAJA Length = 307 Score = 281 bits (719), Expect = 3e-74, Method: Composition-based stats. Identities = 84/320 (26%), Positives = 138/320 (43%), Gaps = 18/320 (5%) Query: 1 MKKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPL 60 M S LDLNLL + LM E SVT+AA + +T AVS +LA+LR DPLFV S Sbjct: 1 MFVSFRALDLNLLKVFEALMTEGSVTRAASALTMTQPAVSNALARLRDALGDPLFVRSGT 60 Query: 61 GLSPTPLMVSMEQNLAEWMQMSNLLLDKP-HHQTPRGLKFELAAESPLMMIMLNALSKQI 119 G+ PT V + + + E ++ LD+ +F L+ + +++ L + Sbjct: 61 GIRPTQRAVVLWEPIGEALESVRGALDEQVFDPARAQTEFSLSMSDYVSSLVMPDLLGHL 120 Query: 120 YQRYPQATIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSD 178 + P+A + + D + VD S + + P AI L++ Sbjct: 121 GKVAPKARVHTVPNTILEIADQLEDNRVDCVMSVYVNEAQQ-------PAAIRSRSLWTV 173 Query: 179 VPCVWLRKDHPALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPE 237 ++R+ HP + + TFL H+ + + D L G R + ++ Sbjct: 174 DYACFMRRGHPLAGMKRLSTRTFLNAGHVDVSLAGKTMPSYDLFLASRGLSRNLVATVNH 233 Query: 238 FEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKR 297 + + + Q D L+A P + ++ L L A+PLP + +L WH+R Sbjct: 234 YSAAYEVVRQSD--LIAVLPSDLRSQSRHAPL-LHAMPLPLQAPPRI-----VSLFWHQR 285 Query: 298 NSHNPKIVWLRETIKNLYAS 317 N P WLRET+ ++A Sbjct: 286 NDTVPAQRWLRETLVEMFAR 305 >UniRef50_A9CLK9 Transcriptional regulator, LysR family n=2 Tax=Alphaproteobacteria RepID=A9CLK9_AGRT5 Length = 325 Score = 280 bits (717), Expect = 5e-74, Method: Composition-based stats. Identities = 82/317 (25%), Positives = 133/317 (41%), Gaps = 22/317 (6%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 ++ +DLNLL+ L ER+VT+A RI T A+S +L++LR D LFV P GL Sbjct: 8 MNLHGIDLNLLVAFDALNSERNVTRAGSRIGRTQPAMSAALSRLRFLLRDELFVRGPNGL 67 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGLK--FELAAESPLMMIMLNALSKQIY 120 PTP V + + ++ ++ L P F +A + ++L L + Sbjct: 68 QPTPRAVELAEPISLALREIQRTLQFTQGFDPDKSTISFSIAVSAHAGSVILPRLLSLLE 127 Query: 121 QRYPQATIKLRNWDY--DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSD 178 ++ P IK+R++ D++ + G VD+ + I LF + Sbjct: 128 EKAPGIDIKVRDYSSRDDAVSLLDSGGVDLTVGIPPTPTSR----------ILSARLFQE 177 Query: 179 VPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEF 238 LRKDHP L + ++ +TFL HI + + D L R A+++P Sbjct: 178 RFVCILRKDHPILGRPFDPETFLSLTHILVAPDNEGLDVADAALASKNFRRRAAVTIPHM 237 Query: 239 EQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRN 298 + + A D + + +L + PLP VPF L WH+RN Sbjct: 238 HVAPALVASSDMVA-TVIESVVAHSGFAERLAVFDFPLPL-------NPVPFVLSWHRRN 289 Query: 299 SHNPKIVWLRETIKNLY 315 +P WLR + + Sbjct: 290 DGHPAQQWLRNGLLAAF 306 >UniRef50_A0KKG7 HTH-type transcriptional regulator YidZ n=3 Tax=Aeromonas RepID=A0KKG7_AERHH Length = 324 Score = 279 bits (716), Expect = 6e-74, Method: Composition-based stats. Identities = 156/312 (50%), Positives = 214/312 (68%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 + + LDLNLL+ +LL+QERSVTKAAK++NVT VSK+LA+LR WFDDPLF+ + GL Sbjct: 2 RPLIDLDLNLLVVFRLLLQERSVTKAAKKLNVTAPTVSKALARLRDWFDDPLFLRTQRGL 61 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQR 122 PT L +++E+ L EW Q+S + + P G F L ESP + LN L IY+ Sbjct: 62 EPTNLSLTLEEELKEWFQLSGNIASLCGNAIPAGAAFRLVLESPFYISFLNDLPMVIYET 121 Query: 123 YPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCV 182 Y ++TI++ NWD+ SL+ I G+ D+GF RE+HP S ++ LP ID+EVLF D P V Sbjct: 122 YRKSTIRIMNWDHHSLNDIINGDADLGFCARETHPSSLARVNRLPYYIDHEVLFEDRPMV 181 Query: 183 WLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 +LRKDHP L +TWNLD FL YPH+S+ WE SD WALD++L + G R + + + FEQ+L Sbjct: 182 FLRKDHPLLARTWNLDNFLAYPHVSVVWEASDAWALDSLLDDEGLSRQVPIRVSSFEQAL 241 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 +AAQ D+ L+A P YC Y + H L++LPLP DE+ ++L++ F LLWHKRN+HN Sbjct: 242 HIAAQSDHELIAVVPSYCASYARQHHNNLISLPLPLDEALYRQLDIAFILLWHKRNNHNT 301 Query: 303 KIVWLRETIKNL 314 K++WLR+ IK L Sbjct: 302 KVLWLRDEIKRL 313 >UniRef50_Q39AY8 Transcriptional regulator, LysR family n=1 Tax=Burkholderia sp. 383 RepID=Q39AY8_BURS3 Length = 331 Score = 279 bits (716), Expect = 6e-74, Method: Composition-based stats. Identities = 70/322 (21%), Positives = 121/322 (37%), Gaps = 25/322 (7%) Query: 4 SITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLS 63 + +DLNLLL +L + RS T+AA +++T +VS +L +LR FDD LFV + G+ Sbjct: 22 DLRNIDLNLLLVFDVLYRTRSTTRAADALHLTQPSVSNALKRLRTLFDDALFVKTADGMQ 81 Query: 64 PTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPR--GLKFELAAESPLMMIMLNALSKQIYQ 121 PTP ++ + E + L P F L I + L + + Sbjct: 82 PTPRADAIAARVDEGLASLRTALQAGRAFDPATSTRTFRLYTSDLGQAIFMPPLVAHLRR 141 Query: 122 RYPQATIKLRNWDYDSLDAITR-GEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 P I + D+ + + G++D+ + + L + LF + Sbjct: 142 VAPGIRIVTADPPLDAAQQMMKLGQIDLALG----------MFTGLHADFHQQRLFHETY 191 Query: 181 CVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQEL----GRERTIAMSLP 236 +R DHP + T + F H+S + L L G R + + L Sbjct: 192 VALVRNDHPMIGATLTAEQFFAADHVSYTPTAGSHAHFEAALYALSPHAGSTRHVVLQLA 251 Query: 237 EFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHK 296 + + D L+ R + +L + V+LP WH+ Sbjct: 252 HSFGLERIVSSSD-LIACIPSRLARELARLQDVRAVSLPF-------DTAPADIAQFWHE 303 Query: 297 RNSHNPKIVWLRETIKNLYASM 318 R + WLR + +L+ + Sbjct: 304 RYQRDEGHQWLRTLVYDLFHDL 325 >UniRef50_Q393U0 Transcriptional regulator, LysR family n=6 Tax=Burkholderiales RepID=Q393U0_BURS3 Length = 310 Score = 278 bits (713), Expect = 1e-73, Method: Composition-based stats. Identities = 75/319 (23%), Positives = 141/319 (44%), Gaps = 22/319 (6%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 ++ ++DLNLL+ L L+ E+ VT+AA ++ ++ SA+S +L +LR D L + + G+ Sbjct: 1 MNLRSVDLNLLVALDALLTEKHVTRAATKVGLSQSAMSSALGRLRILMRDELLIRNATGM 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQIY 120 PTP + +E+ L + + + LL+ P F L L +++ L Q+ Sbjct: 61 EPTPRALELEEPLRQLLHQAERLLESDGAFDPATTAGHFRLRMSDVLEYLLMPPLLAQLE 120 Query: 121 QRYPQATIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 Q P T+ + + ++ A+ ++D+ S H + + + LF D Sbjct: 121 QEAPGVTLDVVHLSPGQTVTALEADDIDVAVSMDLEHAGAVQAMP----------LFDDR 170 Query: 180 PCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFE 239 + +DHP + LD FL PH+ + +D +D L + R R + +++P + Sbjct: 171 MVCVMARDHPCAAEALTLDLFLSLPHLKVSISSTDGRYVDAKLAGMRRARNVVLNVPHWL 230 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 + + + + R + + L L ALP +++ WH+R+ Sbjct: 231 VVPHLLRHSSMVAV-MSARLAERFA-ADGLVLKALPFE-------SAGFHWSMYWHRRHD 281 Query: 300 HNPKIVWLRETIKNLYASM 318 P WLRE I+ M Sbjct: 282 SVPAQAWLREKIREAAEPM 300 >UniRef50_A8GG55 Transcriptional regulator, LysR family n=1 Tax=Serratia proteamaculans 568 RepID=A8GG55_SERP5 Length = 310 Score = 278 bits (713), Expect = 2e-73, Method: Composition-based stats. Identities = 77/319 (24%), Positives = 134/319 (42%), Gaps = 23/319 (7%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 +++ +DLNLL+ + L Q R+VT A +R+N +VS +LA+LR FDDPLFV S G+ Sbjct: 1 MNLSNVDLNLLVVFEALYQTRNVTVAGQRLNRAQPSVSNALARLRTLFDDPLFVRSGGGM 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG---LKFELAAESPLMMIMLNALSKQI 119 PT + + ++ + L P P +F LAA + +L + ++ Sbjct: 61 LPTARAHQLMLQIQPVLEQIHQALTPPTRFDPATASQRRFRLAAGDYADITLLPTIISRL 120 Query: 120 YQRYPQATIKLRNWDYDS-LDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSD 178 Q P I++ D + + + RGE+D+ G +P + + LF++ Sbjct: 121 RQAAPGIDIRVSRLDRRTVVQQLERGEIDVALGGHL----------EVPEGMLVQPLFNE 170 Query: 179 VPCVWLRKDHP-ALHQTWNLDTFLRYPHISICWE--QSDTWALDNVLQELGRERTIAMSL 235 + HP ++WNL ++ PH S +D L E+G ER +A + Sbjct: 171 SFTCIASRHHPQIAAESWNLQQYIGLPHALYAPSDDGSARGIIDQRLTEMGLERRVAATF 230 Query: 236 PEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWH 295 + A D L+ A + + ++ + LP V + Sbjct: 231 SHIIALPAVVAGSD-LIATLATSVARQFADPSRIQFLPLPSELAMPAFPIECVAGRQV-- 287 Query: 296 KRNSHNPKIVWLRETIKNL 314 +P + WL +T+ L Sbjct: 288 ---KRDPALAWLCDTLSQL 303 >UniRef50_A6FYP7 Transcriptional regulator, LysR family protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6FYP7_9DELT Length = 312 Score = 278 bits (712), Expect = 2e-73, Method: Composition-based stats. Identities = 87/317 (27%), Positives = 134/317 (42%), Gaps = 18/317 (5%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 + LDLNLL+ +L +ERSVT+AA R+ VT SA+S +L +LR +D L V + G++ Sbjct: 9 LAQLDLNLLVAFDVLAEERSVTRAAARLGVTQSAMSHTLRRLRGVLEDELLVRTRGGMAL 68 Query: 65 TPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQIYQR 122 TP ++ + + L P P F L ++ L L Sbjct: 69 TPRAAALVAPVRTGLTTLQRALADPEGFDPATSERHFRLTGPDLFELLYLPRLIAGFGAS 128 Query: 123 YPQATIKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPC 181 + ++ L + L D + GE+D+ + R R + + VL D Sbjct: 129 AGRLSVTLAHVAPRQLADQLETGELDLAITARMLDGREQPAQ----PGLMRRVLLRDGWR 184 Query: 182 VWLRKDHPAL--HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFE 239 ++R HPAL +L FL H+ + +D VL E +RT+A+ + F Sbjct: 185 CFVRAGHPALTKRGRLSLPRFLAASHVMVSPTGRGQGIVDVVLAEQDEQRTVAVRVSSFA 244 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 + +AA D L+ TAP + L VA PLP E + WH+R S Sbjct: 245 TAPVVAASSD--LILTAPASLEAVVGHLGLVCVAPPLPLPEH-------SVDMTWHQRLS 295 Query: 300 HNPKIVWLRETIKNLYA 316 +P WLRE + Sbjct: 296 EDPGHQWLREQLVAATR 312 >UniRef50_A5W6Q9 Transcriptional regulator, LysR family n=12 Tax=Pseudomonas RepID=A5W6Q9_PSEP1 Length = 326 Score = 278 bits (712), Expect = 2e-73, Method: Composition-based stats. Identities = 75/317 (23%), Positives = 133/317 (41%), Gaps = 24/317 (7%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 +I+ DLNLL +L++E++V++AA+R+ +T VS +LA+LR DPL V + Sbjct: 26 MNISNFDLNLLRVFDMLLREQNVSRAAERLALTQPTVSNALARLRDQLGDPLLVRVGRRM 85 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTP--RGLKFELAAESPLMMIMLNALSKQIY 120 PTP +++E + +Q L P + +A + + + L ++ Sbjct: 86 RPTPRALALEGPIRAALQQIEQTLGTGDGFEPQRSHRQLRIALTDFVEQLCMPPLLARLE 145 Query: 121 QRYPQATIKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 P I + + + +A+ RG++D+ +P + Sbjct: 146 LLAPNVRIDVVHLAPNLPAEALDRGDLDLVLGR----------FDEVPARFTRHPWRRET 195 Query: 180 PCVWLRKDHPAL--HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPE 237 + LR+ HP L Q +LD FL HI + +D L E G R IA + P Sbjct: 196 LQIALRQQHPHLVPGQALDLDAFLGLRHIWVH-GGQTRGMVDQWLAEQGLTRQIAYTTPN 254 Query: 238 FEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKR 297 + Q+ +AA D + + + Q + L L + LP + + + + + Sbjct: 255 YLQAAHLAAATD-MCVVLPRQLAQQFAHLLPLAVYELPFALEPFELEVVHLS-------H 306 Query: 298 NSHNPKIVWLRETIKNL 314 H+P + WL E I L Sbjct: 307 RQHDPALAWLVEQILTL 323 >UniRef50_Q46YJ7 Transcriptional regulator, LysR family n=5 Tax=cellular organisms RepID=Q46YJ7_RALEJ Length = 394 Score = 278 bits (711), Expect = 3e-73, Method: Composition-based stats. Identities = 73/318 (22%), Positives = 127/318 (39%), Gaps = 23/318 (7%) Query: 6 TTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPT 65 LD LL L L+ E+SVT+ A R+ + A+S +L +LR D + V G+ PT Sbjct: 84 DHLDTYLLRVLHTLLTEQSVTRTAVRLGQSQPAISNTLKRLREITGDAILVRGKSGMVPT 143 Query: 66 PLMVSMEQNLAEWMQMSNLLLDKPHHQTPR--GLKFELAAESPLMMIMLNALSKQIYQRY 123 + + + + + + P P F L A L L + +++ + Sbjct: 144 ERGRELLELAEQSLAAMDRIARPPQQFDPATTTRTFHLGAPDYLDAFFLPNIVERVRRLA 203 Query: 124 PQATIKLRNW--DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPC 181 P A + + D L+ + +G++DI S P + LF D Sbjct: 204 PGAKLFVHPMTSSSDFLEDLEQGQLDIVIGNWLSP----------PEHLHISPLFDDEVV 253 Query: 182 VWLRKDHPALHQTWNLDTFLRYPHISICW-EQSDTWALDNVLQELGRERTIAMSLPEFEQ 240 L HP + L +L PH++ +D L E G +R I ++LP F Sbjct: 254 CMLGAQHPLARKGLTLKHYLEMPHLAPAPYASMQRSMIDQALAEQGYKRNIQVTLPYFGL 313 Query: 241 SLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 ++ + D + T ++ +Y Q + +V P+ F + F LWH+R Sbjct: 314 VPYVLMKTDMVF-TTGRQFAAHYAQYLPIRMVPSPVTFPRMR-------FYQLWHERCHA 365 Query: 301 NPKIVWLRETIKNLYASM 318 P ++W+R I + + Sbjct: 366 APDVMWMRRMIAEVATDL 383 >UniRef50_Q3JR86 LysR-family regultor n=70 Tax=Proteobacteria RepID=Q3JR86_BURP1 Length = 508 Score = 277 bits (710), Expect = 3e-73, Method: Composition-based stats. Identities = 72/324 (22%), Positives = 135/324 (41%), Gaps = 24/324 (7%) Query: 1 MKKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPL 60 M + +D LL L L+ ERSVT+AA ++N + A+S +L +LR DPL V Sbjct: 200 MSQQREAIDTYLLRVLHTLLMERSVTRAAVKLNQSQPAISAALRRLRDITGDPLLVRGKS 259 Query: 61 GLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQ 118 G+ PT + + + + ++ + + H+ P + + L ++ + + ++ Sbjct: 260 GMVPTEYGLRLLEPVQNALREIERIKFQQHNFDPATSIRCYRIGCPDYLNVLFVPTVVER 319 Query: 119 IYQRYPQATIKLRNWDY--DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLF 176 Q P AT++ + D A+ G++DI P L + LF Sbjct: 320 FRQAAPNATLEFHSLGPAFDYELALEDGKLDIVVGNWPEPPEQLHLSN----------LF 369 Query: 177 SDVPCVWLRKDHPALH-QTWNLDTFLRYPHISICW-EQSDTWALDNVLQELGRERTIAMS 234 D + HP LD +L PH++ A+D L +R + ++ Sbjct: 370 VDEIVCLMSNSHPFAKRGGLTLDQYLNAPHLAPTPYSVGQRGAIDVHLARERLKRHVVVT 429 Query: 235 LPEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLW 294 LP F + ++ + D + T + +Y + L +V PL F + + LW Sbjct: 430 LPYFNLAPYVLVKSDLIFTTT-RLFADHYAKFLPLSVVPAPLDFP-------PMQYYQLW 481 Query: 295 HKRNSHNPKIVWLRETIKNLYASM 318 H+R ++ ++ WLR + ++ Sbjct: 482 HERCHYSDEVRWLRGLVAEATRTL 505 >UniRef50_Q88I06 Nodulation protein d1 n=4 Tax=Gammaproteobacteria RepID=Q88I06_PSEPK Length = 312 Score = 277 bits (709), Expect = 4e-73, Method: Composition-based stats. Identities = 70/317 (22%), Positives = 140/317 (44%), Gaps = 21/317 (6%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 LDLNLL+ L +L++E+++T+AA+R+++T SA S L +LR +F+D L V + Sbjct: 1 MRFHHLDLNLLVALDILLEEQNITRAAERLHMTQSATSGVLGRLRTFFEDELLVQVGRKM 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPR--GLKFELAAESPLMMIMLNALSKQIY 120 PTP + + + + E + + P F L A L+ ++ + ++I+ Sbjct: 61 QPTPYALELAKPVREVLLTIRASITAKPVFDPAASKRHFRLVASDYLISVVFAQVIQKIH 120 Query: 121 QRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 Q PQ T ++ S + + RGEVD+ L ++LF + Sbjct: 121 QEAPQITFEMIGPGDSSAELLMRGEVDMMIVPE----------RYLIEGHPAQLLFEEDH 170 Query: 181 CVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVL-QELGRERTIAMSLPEFE 239 + +D+P + + L+ +++ HIS+ + ++ ++++ + G R + + +F Sbjct: 171 VCVVWRDNPEVGEHLTLEQYMQMGHISVGFGRNRHLSIEDWFMNQYGFNRRLEVITNDFN 230 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 + + R + Y L L+ P+ ++ +LWH+ Sbjct: 231 TLPQLLVGT-VRVATMHRRLAELYAGYLPLRLLPPPVKIPVMRE-------FMLWHRSMD 282 Query: 300 HNPKIVWLRETIKNLYA 316 +P WLRE I ++ Sbjct: 283 GDPMHRWLRERISDVIQ 299 >UniRef50_C4KB22 Transcriptional regulator, LysR family n=37 Tax=Betaproteobacteria RepID=C4KB22_THASP Length = 333 Score = 277 bits (709), Expect = 5e-73, Method: Composition-based stats. Identities = 63/318 (19%), Positives = 117/318 (36%), Gaps = 19/318 (5%) Query: 2 KKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLG 61 + S+ DLNLL L + + SV++AA+ + ++ VS +L +LR +PLF+ + G Sbjct: 21 RMSLRDFDLNLLRVLLAVYEAGSVSRAAEHLGLSQPTVSSALGRLRRALGEPLFIKTASG 80 Query: 62 LSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPR--GLKFELAAESPLMMIMLNALSKQI 119 ++PT ++ + + P +A ++ L + + Sbjct: 81 VTPTARTHALASSARAMLARLETDFFVADRFDPAKYEGNLTVALSDVGELVFLPRILDSV 140 Query: 120 YQRYPQATIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSD 178 + P A + + + A+ GEVD+ E L Sbjct: 141 RRLAPLAMLDSVTLAPGELMRAMEDGEVDLAIGYYPDLDA---------AGFYREKLLDH 191 Query: 179 VPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEF 238 LR DHP + +L+ FL H ++ + + L+ L +R I + P F Sbjct: 192 RFVCLLRADHPVQDRQLSLERFLSLEHAAVRAKGRSQEIFEKYLERLRIQRRIVLRTPHF 251 Query: 239 EQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRN 298 + + D L+ T P +Y + P + WH+ Sbjct: 252 MSLPGIIGRSD--LVVTLPHAIGHYFTRVGEKVRMAEPPLAIP-----HIELYQHWHRGF 304 Query: 299 SHNPKIVWLRETIKNLYA 316 H+P+ WLR + L++ Sbjct: 305 HHDPRNRWLRTLVAGLFS 322 >UniRef50_A8V9B9 LysR-like regulatory protein n=2 Tax=Betaproteobacteria RepID=A8V9B9_9BURK Length = 308 Score = 276 bits (708), Expect = 5e-73, Method: Composition-based stats. Identities = 59/310 (19%), Positives = 120/310 (38%), Gaps = 20/310 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +D+ LL + SVT+AA+ + ++ +S +L+KLR + DPLFV + G+ TP Sbjct: 4 IDVKLLNVFAETYRTSSVTQAAENLGLSQPTISFNLSKLRDHYKDPLFVRTSRGMEATPF 63 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTP--RGLKFELAAESPLMMIMLNALSKQIYQRYPQ 125 + + + + + + + P F +A +++L L ++ P+ Sbjct: 64 AQELYEQVVDLLASFSNIARLQTSFDPSEAQRIFRIAMTDISQIVLLPTLLNKLRIVAPR 123 Query: 126 ATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 A +++ + ++ + GEV++ + L + LF V Sbjct: 124 AQLRISHITTETPRMLESGEVELAVGF----------MPQLDAGFYQQKLFPQRFVVLAA 173 Query: 186 KDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMA 245 H AL + +L+ +L H+++ + +D L+E R + + +P + + Sbjct: 174 SRHVALGDSMSLEYYLSAGHVTVTPSGTGHSIIDRTLREQQLHRHVVLDVPNYLAIADIV 233 Query: 246 AQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIV 305 AQ D LL + + +P + WH R + Sbjct: 234 AQTD-LLATVPQKLADLMSSSVDARRYPVPFEIP-------QYDVKQHWHARTHQDAGHR 285 Query: 306 WLRETIKNLY 315 WLR + L+ Sbjct: 286 WLRALLAELF 295 >UniRef50_C5AL93 Transcriptional regulator, LysR family protein n=13 Tax=Burkholderia RepID=C5AL93_BURGB Length = 331 Score = 276 bits (707), Expect = 8e-73, Method: Composition-based stats. Identities = 76/322 (23%), Positives = 133/322 (41%), Gaps = 24/322 (7%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 +S+ +DLNLL +++E+S+TKA R+ ++ A+S SLA+LRA FDDPLFV + G+ Sbjct: 2 RSLDGVDLNLLQVFLAIVEEQSLTKAGARLALSQPAMSYSLARLRALFDDPLFVRTRHGM 61 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPR--GLKFELAAESPLMMIMLNALSKQIY 120 PTP+ + +A + L P F L+ M L ++ +++ Sbjct: 62 QPTPISQELAVIVARALDTVREALRYAERFDPAVSTRAFRLSLSDAGEMAYLPSICEEVN 121 Query: 121 QRYPQATIKLRNWD-YDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 + P + ++ + DA+ +D L L ++VLF + Sbjct: 122 RLAPNIKVVVQPLPVGEIEDALRARRLDFAIGN----------LPELTARTRHQVLFEEG 171 Query: 180 PCVWLRK--DHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPE 237 +R+ P L F R H+ + + ALD+ L+ G R I + +P Sbjct: 172 YVCMMRRRVGGP-ARPALTLAEFGRASHVLVRSIEHSHHALDDALRTQGVARNIGLEVPH 230 Query: 238 FEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKR 297 F + A D + R Q + + + LP+ V T+ WH+ Sbjct: 231 FVALPRVLAVTDFVA-TLPRRLAQIFAKDGAFDIFELPVAI-------APVGVTMHWHEH 282 Query: 298 NSHNPKIVWLRETIKNLYASMA 319 + I W+R+ + + A Sbjct: 283 FHEDEGIAWMRQLLGQIMRRFA 304 >UniRef50_B8KV86 Putative transcriptional regulator, LysR family n=1 Tax=gamma proteobacterium NOR51-B RepID=B8KV86_9GAMM Length = 302 Score = 276 bits (706), Expect = 1e-72, Method: Composition-based stats. Identities = 60/317 (18%), Positives = 135/317 (42%), Gaps = 21/317 (6%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 ++ ++DLNLL ++ E ++T AA +I ++ A+S +L +LR DD LFV++ G+ Sbjct: 1 MNLRSVDLNLLTIFDAIVSEGNLTHAADKIGMSQPAISAALGRLRVTLDDELFVSTGRGV 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTP--RGLKFELAAESPLMMIMLNALSKQIY 120 PT + +++ + ++ L P F +++ ++++ L + + Sbjct: 61 KPTQRALQLQEPVRRILEDVRAALTSTGEFDPESSDRVFTISSIDYGGIVVIPRLLRYLQ 120 Query: 121 QRYPQATIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 ++ + + ++ + R D+ + L + ++L ++ Sbjct: 121 KQQSPIIVNINPSQTGEAHRDVDRSSGDLTITSDPL----------LSPDHECKLLRREL 170 Query: 180 PCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFE 239 P RKDHP + + +++ F R H+ + + ALD L +LG R +P F Sbjct: 171 PYCLARKDHPDITGSLSVEQFQRNRHVLLYSNNTRGLALDAHLLQLGFNRECGARVPSFF 230 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 ++ D + + + + + L ++A P + ++WH+ + Sbjct: 231 NMPYIVGNTDMIC-TMPRQMAEDFARQFGLQVLAAPF-------DNWTASYFMVWHRSFN 282 Query: 300 HNPKIVWLRETIKNLYA 316 + WLR++I L + Sbjct: 283 GDSGHCWLRDSIFRLCS 299 >UniRef50_D1TCI7 LysR family transcriptional regulator n=2 Tax=Burkholderia RepID=D1TCI7_9BURK Length = 329 Score = 275 bits (705), Expect = 1e-72, Method: Composition-based stats. Identities = 68/321 (21%), Positives = 130/321 (40%), Gaps = 24/321 (7%) Query: 2 KKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLG 61 + DLNLL+ + L++ERSVT+AA+R+ + AVS +L +LR F D LFV +P G Sbjct: 19 ENDFRRFDLNLLVTFRALLEERSVTRAAQRLLLGQPAVSGALKRLRETFGDELFVRTPQG 78 Query: 62 LSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTP--RGLKFELAAESPLMMIMLNALSKQI 119 ++PTP + + + + ++Q + L +P P F + L ++++ + ++ Sbjct: 79 MTPTPRALELARQIEPFLQSLHQALTQPSVFDPASAQRVFRIGLSDSLELLLMPEIMARL 138 Query: 120 YQRYPQATIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSD 178 P + R+ D + + G +++ + LFS Sbjct: 139 AAAAPGVKLIARSTDSTRAAAMLDDGAIELAVG----------VFRECVPWQRLMPLFSW 188 Query: 179 VPCVWLRKDHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPE 237 + ++D FLR+ H+ + +D L+ G R + S Sbjct: 189 RFVSVYNPQLVRTRRKHLSMDEFLRHRHVLTSFSAELRGFIDERLELQGLNREVVFSSSN 248 Query: 238 FEQSLFMAAQPDNLLLATAPRYC-QYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHK 296 F S F+ + +AT P + + + L L LP +L+W Sbjct: 249 FATSPFIVQRT--AAIATVPEFIGRVWRDTLGLALSPLPFEVP-------GYEVSLMWAA 299 Query: 297 RNSHNPKIVWLRETIKNLYAS 317 + +P + WL+ + + + Sbjct: 300 AHDQDPALAWLKREFADAFGT 320 >UniRef50_Q0VLU8 Transcriptional regulator, LysR family n=2 Tax=Alcanivorax RepID=Q0VLU8_ALCBS Length = 310 Score = 275 bits (705), Expect = 1e-72, Method: Composition-based stats. Identities = 74/313 (23%), Positives = 122/313 (38%), Gaps = 23/313 (7%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 ++ DLNL + + E S+T+AAK +N+T AVS +LA+LRA +DPLFV + Sbjct: 1 MHVSRFDLNLFVVFDAIYTEGSLTRAAKVLNLTQPAVSHALARLRARLNDPLFVRQGSRM 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTP--RGLKFELAAESPLMMIMLNALSKQIY 120 PT +M + + L + F L L +L AL Q Sbjct: 61 VPTARARAMVSPVRHALGGFQRCLSEEGGFDASEAERTFVLGLRDGLEARLLPALMSQFM 120 Query: 121 QRYPQATIKLRNWDYDSLD-AITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 P ++ + + G +D+ +++ +LP AI+++V+ Sbjct: 121 DEAPGIKLQSLTVSRRQMATELASGRLDLA----------CDVMLALPEAIEHQVVLEGP 170 Query: 180 PCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFE 239 V +R+ HP +L +L H+ + + D L G R I + ++ Sbjct: 171 LVVLMRESHPLAQG-MDLPDYLAAQHVLVSSRREGPGLEDFGLARQGYRRHIRLRCQHYQ 229 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 +L Q D LLL + LV P P + L WH+ S Sbjct: 230 AALSTVQQTD-LLLTMPASLAGQLSDQ---GLVWKPFP-----GGLPGLEMHLYWHRDQS 280 Query: 300 HNPKIVWLRETIK 312 +P WLR+ + Sbjct: 281 ADPAHSWLRQRVL 293 >UniRef50_A4SSQ1 Transcriptional regulator, LysR family n=2 Tax=Aeromonas RepID=A4SSQ1_AERS4 Length = 322 Score = 275 bits (704), Expect = 1e-72, Method: Composition-based stats. Identities = 101/314 (32%), Positives = 169/314 (53%), Gaps = 10/314 (3%) Query: 4 SITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLS 63 + +DLNLL+ LQ+L++ER+ ++AA+R++++ SAVSK+L +LR FDDPLFV S GL Sbjct: 5 QLGRIDLNLLIILQVLLEERNGSRAARRLHLSQSAVSKALGRLRETFDDPLFVRSAYGLE 64 Query: 64 PTPLMVSMEQNLAEWMQMSNLLLDKP-HHQTPRGLKFELAAESPLMMIMLNALSKQIYQR 122 PT + ++Q L + + L+ P +F +A+ + ++ ++ Sbjct: 65 PTARALVLQQQLQPILLSLDNLIQPPDFDPASTEREFVIASMDSAFTLFAPLYLSELKRQ 124 Query: 123 YPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCV 182 P ++ W +SL +++G+VDI F+ RE+ S L +LP AI +L D Sbjct: 125 APGIRLRYEEWTENSLTEMSQGQVDIAFTVRENCISSDFRLDTLPNAICQRLLAIDDLTC 184 Query: 183 WLRKDHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQS 241 ++ DHPALH+ W+L +L YPH+ E D W LD+ L + R I ++P FE + Sbjct: 185 LVQHDHPALHEPEWDLARYLAYPHVQTYCEGRDRWMLDHKLAGMDLYRRIEATVPSFEAA 244 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 L M D +++ + Y ++ Q++ L + LP+ D + L+WH+R+ + Sbjct: 245 LRMGMHSD-MIVTLSRLYARHATQVYPLVPLPLPIALD-------SISHLLIWHQRHEED 296 Query: 302 PKIVWLRETIKNLY 315 P WLRET+ L Sbjct: 297 PGHRWLRETLLALI 310 >UniRef50_C6DDI5 Transcriptional regulator, LysR family n=4 Tax=Enterobacteriaceae RepID=C6DDI5_PECCP Length = 310 Score = 275 bits (704), Expect = 1e-72, Method: Composition-based stats. Identities = 73/320 (22%), Positives = 125/320 (39%), Gaps = 21/320 (6%) Query: 1 MKKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPL 60 M+ +DLNLL+ +L +ERSV+ AA ++++ AVS +LA+LR FDDPLF+ + Sbjct: 1 MENDFRGVDLNLLVTFLVLYRERSVSVAADKLHLGQPAVSGALARLRTLFDDPLFIRTGQ 60 Query: 61 GLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQ 118 + PT + L+ + +L +P P L + + ++ L K+ Sbjct: 61 VMRPTARADYLATQLSPAFEQLQSVLGEPESFDPLTDSRAITLGMTDWVEIWLMPLLLKR 120 Query: 119 IYQRYPQATIKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFS 177 + P I L D ++ + VD+ S + L S Sbjct: 121 LKANAPHLRINLVATDPFLDVERLENDSVDLVISVASPQAG----------WLKQRALLS 170 Query: 178 DVPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPE 237 AL L+ + + H+ + + + +D++L++ G RTI + P Sbjct: 171 SGFRALWHPQQLALPSPVPLEVYSQQRHLLVTYRERAHGIVDDMLEKQGMTRTIYYTTPH 230 Query: 238 FEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKR 297 F + ++ + + Q + L P+P D + LWH R Sbjct: 231 FSALPGILQHTPSVA-TVPEKLATLWCQHYGLN--DSPVPLDLPT-----YTLSALWHAR 282 Query: 298 NSHNPKIVWLRETIKNLYAS 317 NP I WL E I A Sbjct: 283 QDSNPAIAWLYEQIAEAIAE 302 >UniRef50_Q391Q9 Transcriptional regulator, LysR family n=1 Tax=Burkholderia sp. 383 RepID=Q391Q9_BURS3 Length = 322 Score = 275 bits (704), Expect = 2e-72, Method: Composition-based stats. Identities = 72/321 (22%), Positives = 126/321 (39%), Gaps = 17/321 (5%) Query: 1 MKKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPL 60 MK LDLNLL LM E +VT+AA+R+ ++ SAVS +L +LR D LF + Sbjct: 1 MKDVFRQLDLNLLRVFAALMAEGNVTRAAERLALSQSAVSNALRRLRESLGDVLFEKTVS 60 Query: 61 GLSPTPLMVSMEQNLAEWMQMSNLLLDK-PHHQTPRGLKFELAAESPLMMIMLNALSKQI 119 G+ PT + + + F +A + ++ L+ + Sbjct: 61 GVRPTARARELWSAVQPHFDALKQAISPDQFDPQEHRGTFTIAMSDYSVERIMPRLAHFM 120 Query: 120 YQRYPQATIKLRNWD-YDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSD 178 + P I+L + D RG VD+ G + + ++ Sbjct: 121 GEHAPSMRIELTPFSVADLPAMFDRGGVDLAIGGYLNDSSP-------SSGVRTHEMWPI 173 Query: 179 VPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEF 238 +RKDHP L FL H+ + + D++L G +R + ++L + Sbjct: 174 HWSCLMRKDHPLAKGPLTLKRFLAARHLDVGFSGMRVPVYDSLLSAHGLQRNLVLTLNAY 233 Query: 239 EQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRN 298 +L + + D + + L L + L + + P+ ++WH+R Sbjct: 234 SPALAIIRESDFIGVLP--------TTLLDLSIHEKELVSRQPPVRMPARPYCVIWHQRW 285 Query: 299 SHNPKIVWLRETIKNLYASMA 319 +P WLR+TI +L+ A Sbjct: 286 DSHPAHRWLRQTIVSLFTRPA 306 >UniRef50_A9GGP1 LysR-family transcriptional regulator n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9GGP1_SORC5 Length = 312 Score = 275 bits (704), Expect = 2e-72, Method: Composition-based stats. Identities = 72/316 (22%), Positives = 129/316 (40%), Gaps = 19/316 (6%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 +++ +D+NL++ L L+QERSVT AA+R+ ++ A+S +L +LR F DPL + + Sbjct: 1 MNLSAIDVNLVIALDALLQERSVTLAARRVGLSQPAMSHALTRLRELFSDPLLIRVGRQM 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLD---KPHHQTPRGLKFELAAESPLMMIMLNALSKQI 119 + T +M + + L F +AA + ++++ L+ + Sbjct: 61 ALTSRAEAMTPQVTAIVHDLAGLFGETTPTFDPATSDRAFRIAATEYVELVLMPRLNAAL 120 Query: 120 YQRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 Q P+ + L D ++DA+ GE+D+ SLP + LF D Sbjct: 121 AQGGPRLALHLLPLDGRAVDALRSGEIDLAIGVFPQE--------SLPPDLRRAPLFDDR 172 Query: 180 PCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFE 239 R HP +L T+ PH+ + + D+++ G R AM++P Sbjct: 173 FAGLARMSHPTARGQVDLQTYAALPHVVVPRRGAHDGVADDLIAARGIARHEAMTVPHVL 232 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 D L+ A R + ++ L L LP + + W+ R Sbjct: 233 LVPHAITASD-LVATVATRLGRAFSSLVPLRTFDLPFELP-------PIEIAMAWNSRTE 284 Query: 300 HNPKIVWLRETIKNLY 315 +P WLR + + Sbjct: 285 RDPARAWLRGVVTDTA 300 >UniRef50_Q2BJ61 Transcriptional regulator, LysR family protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BJ61_9GAMM Length = 302 Score = 275 bits (704), Expect = 2e-72, Method: Composition-based stats. Identities = 62/315 (19%), Positives = 126/315 (40%), Gaps = 15/315 (4%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 ++ ++DLNLL+ LQ L+ E+ V+KAA+R+N++ AVS++L +LR DP+ V + G Sbjct: 1 MNLRSVDLNLLVVLQALIDEQHVSKAAERLNMSQPAVSRALQRLRTTLQDPILVRTGSGY 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDK-PHHQTPRGLKFELAAESPLMMIMLNALSKQIYQ 121 + V + + L+ + ++ +L +++++ + + + + Sbjct: 61 DLSARAVVLREQLSHVLHEVQAIMQPEQFDPMQAEGVLKLTGLDLELILLMPDVIRMLRE 120 Query: 122 RYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPC 181 + P +++ + + + RG+V +G + Sbjct: 121 KAPNLRVEVVPQLPEHFELLERGDVHFTITGLFPQTH--------HDQYRRIEIARTGHV 172 Query: 182 VWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQS 241 + +D+P +L + H + +D+ L E G +R + + L F Sbjct: 173 CVMDRDNPLAKGELSLQDYANASHGLVSITGKGPGMMDDALGEFGYKRKVMLRLANFMSV 232 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 Q D L+ + Q L L LP F EV + WH R H+ Sbjct: 233 AQFCQQSD-LIFTLPKIMATHLAQGTSLVLRPLPKEFALP-----EVVLYMYWHDRYHHD 286 Query: 302 PKIVWLRETIKNLYA 316 P W+R + +++ Sbjct: 287 PMCSWVRAELAEIFS 301 >UniRef50_A6VSJ2 Transcriptional regulator, LysR family n=28 Tax=Proteobacteria RepID=A6VSJ2_MARMS Length = 328 Score = 274 bits (703), Expect = 2e-72, Method: Composition-based stats. Identities = 82/317 (25%), Positives = 135/317 (42%), Gaps = 19/317 (5%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 ++ +DLNLL+ L L+ E+ V++AA+R++ + A+S +LA LRA F+DPL V L Sbjct: 21 NNLRRIDLNLLVTLHALLVEKHVSRAAQRLHKSQPAISHALANLRAIFNDPLLVRRTGKL 80 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKP-HHQTPRGLKFELAAESPLMMIMLNALSKQIYQ 121 T + L E + L+++P T F LA ++L L + + Sbjct: 81 ELTSRANELLPTLTEALHQLGALIEQPTFESTQAKRVFRLAMSDYGSRVVLPGLIQILRS 140 Query: 122 RYPQATIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 R P +++ L + GE+D+ F S L + LF + Sbjct: 141 RAPGIDLQVIQGSRTSMLTGVYDGEIDMAFGVFN---------SPLSDELHTHTLFIEHF 191 Query: 181 CVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQ 240 K+ + +L PHI + + +++ ++N L G R IAM+LP + Sbjct: 192 ICAADKNTLPKTGSLEKTQWLSRPHILVAMQTNESNEIENALHREGVSRRIAMTLPHWGV 251 Query: 241 SLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 + M A D +L A A R + + L L P P D F+++WH R Sbjct: 252 ASHMVANTDLILTA-ARRSFDLFLEDSPLQLFTPPYPID-------PFKFSMVWHSRRES 303 Query: 301 NPKIVWLRETIKNLYAS 317 + WLR TI + Sbjct: 304 DAGHNWLRHTIIEMLRE 320 >UniRef50_B9Z7Z3 Transcriptional regulator, LysR family n=3 Tax=Proteobacteria RepID=B9Z7Z3_9NEIS Length = 324 Score = 274 bits (703), Expect = 2e-72, Method: Composition-based stats. Identities = 74/315 (23%), Positives = 135/315 (42%), Gaps = 21/315 (6%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 ++T D NLL+ L +L+ E SV +AA+R+ ++PSA+S++LA+LR DPL V + GL P Sbjct: 1 MSTPDFNLLVTLDVLLAEGSVARAARRLRLSPSAMSRALARLRETTGDPLLVRAGRGLVP 60 Query: 65 TPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQIYQR 122 TP + + + +++ +Q + +L F L + +L ++ + Sbjct: 61 TPRALELREQVSQLVQDAAAVLRPAEKLDLTQLVRTFTLRVGDGFVENFGPSLIARVGEA 120 Query: 123 YPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCV 182 P ++ + G VD+ + + + LF D Sbjct: 121 APGVRLRFMPKSNKDTAPLRDGSVDL---------DTGVVGEGTGPEVRVRALFQDRFIG 171 Query: 183 WLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 +R+ HP + H+ + +D +D L+ +G ER I + F +L Sbjct: 172 VVRQGHPLCQGEITPARYAAGRHVLVSRRGTDKGPVDETLRAIGLEREIMTIVGGFAPAL 231 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 +A D L+AT P + + + + + LPF E+ +LLWH R + Sbjct: 232 ALARATD--LVATVP---ERHTGTLRDGMHSFALPFPAP-----EITVSLLWHPRMDADL 281 Query: 303 KIVWLRETIKNLYAS 317 WLR ++ + A+ Sbjct: 282 AHRWLRGCVREICAA 296 >UniRef50_Q4KHX1 Transcriptional regulator, LysR family n=1 Tax=Pseudomonas fluorescens Pf-5 RepID=Q4KHX1_PSEF5 Length = 308 Score = 274 bits (703), Expect = 2e-72, Method: Composition-based stats. Identities = 80/318 (25%), Positives = 140/318 (44%), Gaps = 21/318 (6%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 + +DLNLL+ L L+ E+ VT+ A R++++ A+S SL+KLR DDP+ + L Sbjct: 6 LRNIDLNLLVVLDALLTEKHVTRTALRLHLSQPAISHSLSKLRGLLDDPILIRRGSELVL 65 Query: 65 TPLMVSMEQNLAEWMQMSNLLLDKPHHQTPR--GLKFELAAESPLMMIMLNALSKQIYQR 122 + L +++Q L E + L K P F LA ++L L ++ + Sbjct: 66 SSLAQNIQQPLREILGQIETLFGKSIDFDPASSQRIFTLAMSDYGAALVLPNLMVRLRRD 125 Query: 123 YPQATIKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPC 181 P T+ + + +++G++D+ + +L I EVLF + Sbjct: 126 APNTTLVVTQDTRHGMFEQVSQGKIDLALG----------VFPNLSGDISTEVLFEETFS 175 Query: 182 VWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQS 241 L + T +LD++L PHI + + S +D++L++ G +R IA+S+P + + Sbjct: 176 CLLDRRTLPADGTLDLDSYLARPHILVSMDGSANGEVDSLLRDEGLQRRIAVSVPHWRTA 235 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 M D +L + + L PF +WH+R + Sbjct: 236 PSMIHNTDLILTVATRTLDEALLNQDLIQLR--------PPLPIPPFPFVQIWHQRFDNE 287 Query: 302 PKIVWLRETIKNLYASMA 319 P VWLRE +K + A A Sbjct: 288 PAHVWLREQVKQVVAHSA 305 >UniRef50_B7CP85 Transcriptional regulator, LysR family protein n=1 Tax=Burkholderia pseudomallei 576 RepID=B7CP85_BURPS Length = 305 Score = 274 bits (702), Expect = 2e-72, Method: Composition-based stats. Identities = 76/320 (23%), Positives = 133/320 (41%), Gaps = 21/320 (6%) Query: 1 MKK-SITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSP 59 M I DLNLLL +L++ER V+KAA R +++ A+S+ L +LR F D L V + Sbjct: 1 MHMKHIRGADLNLLLAAFVLLEERQVSKAADRYHLSQPAMSRMLQRLRDTFGDELLVRTR 60 Query: 60 LGLSPTPLMVSMEQNLAEWMQMSNLLLDKP-HHQTPRGLKFELAAESPLMMIMLNALSKQ 118 G PT + L E + + LL T F +A I+ L ++ Sbjct: 61 GGFEPTVRGRYILHELGELLPRLDALLRGGLFDPTEAEDTFRVACTDYATTILGPRLFER 120 Query: 119 IYQRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSD 178 +++ P ++ + W + +AI G +D+ E +P + E LF D Sbjct: 121 VFREAPNVSMDVVAWHDHAFEAIEHGRLDLVLWPNE-----------VPDTLYSETLFED 169 Query: 179 VPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEF 238 + DHP+ L +LR+PH + ++ L ++G R + + F Sbjct: 170 DFVCMMSSDHPSGDGPLVLRDYLRFPHAVVSVLGGKQTIVEQRLHDMGVRRAAGLRVSYF 229 Query: 239 EQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRN 298 ++ A+ L+ R Y + +V P F ++ + ++WH R Sbjct: 230 SGAITAIART-ALIATVPRRLAMLYRDRANIRIVEAPAMF-------GKLSYKMVWHPRA 281 Query: 299 SHNPKIVWLRETIKNLYASM 318 + + WLR+TI+ + Sbjct: 282 DGDLALQWLRQTIRAAANDI 301 >UniRef50_C7RKX8 Transcriptional regulator, LysR family n=20 Tax=Proteobacteria RepID=C7RKX8_9PROT Length = 310 Score = 274 bits (702), Expect = 3e-72, Method: Composition-based stats. Identities = 75/315 (23%), Positives = 132/315 (41%), Gaps = 21/315 (6%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 ++T DLNLL+ L +L+ E SV +AA+R+ ++PSA+S++LA+LRA DPL V + GL P Sbjct: 1 MSTADLNLLVTLDVLLAEGSVARAAQRLRLSPSAMSRALARLRATTGDPLLVRAGRGLVP 60 Query: 65 TPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQIYQR 122 TP + + + + +Q + L + L + L ++ ++ Sbjct: 61 TPRALELREQVGPLVQAAEAALRPVEKLDLERLVRMYTLRTSEGFVENFGPDLIARVAEQ 120 Query: 123 YPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCV 182 P + + + G VD+ + + + + + LF D Sbjct: 121 APGVRLCFVQKSNKNSAPLRDGSVDL---------ETGVVGKATAPELRVQALFRDRFIG 171 Query: 183 WLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 +R HP + HI + D +D L+ LG ER I + F +L Sbjct: 172 VVRMGHPLSQGEMTPHRYATGKHILVSRRGFDRGMIDEALKPLGLERQIVTIVSGFSTAL 231 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 +A D L+A+ P + + + + + PLP E+ +L WH R +P Sbjct: 232 VLARASD--LIASVP---ERHTAKLRAGMHSFPLPIATP-----EITVSLHWHPRMDADP 281 Query: 303 KIVWLRETIKNLYAS 317 WLR ++ + Sbjct: 282 AHRWLRGCVREVCGE 296 >UniRef50_A4XX96 Transcriptional regulator, LysR family n=3 Tax=Proteobacteria RepID=A4XX96_PSEMY Length = 312 Score = 274 bits (702), Expect = 3e-72, Method: Composition-based stats. Identities = 83/321 (25%), Positives = 141/321 (43%), Gaps = 24/321 (7%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 LDLNLL+ L+ L+ E++VT+AA R++++ AVS L++LR F+DPL + + G+ Sbjct: 1 MDTRRLDLNLLVTLEALLIEQNVTRAAARLHLSQPAVSAQLSRLRDVFNDPLLIPAQRGM 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGL--KFELAAESPLMMIMLNALSKQIY 120 +PT + + L + + + + P +A + ++ L + Sbjct: 61 TPTVKALELLVPLRQALDQVRATVTTHLNFEPATASLTVSIACTDYVQAALIKHLVVAMR 120 Query: 121 QRYPQATIKLRNWDYDSLD-AITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 + P I LR D L+ +TRGEVD+ ++ P A+ + L+ + Sbjct: 121 REAPGVRIALRILDVPQLELQMTRGEVDLAVIN----------MNGAPPALHAQHLYDES 170 Query: 180 PCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWA-LDNVLQELGRERTIAMSLPEF 238 + R+ HP+LH +D F + H+ + +DN L G R + +S F Sbjct: 171 YVLIGRRGHPSLHAGLTVDEFAQLEHVVVSLRGGGFSTSVDNALVARGLRRNVVLSASSF 230 Query: 239 EQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRN 298 + AQ D +A PR + QL VA PLP + + WH+R+ Sbjct: 231 LPVPELVAQSDC--VALVPRRLVE-GRDEQLLCVAPPLPVE-------GFAIGMFWHERS 280 Query: 299 SHNPKIVWLRETIKNLYASMA 319 + W+RE I + S A Sbjct: 281 DGHAGFRWVREFITLVADSRA 301 >UniRef50_Q0ARX0 Transcriptional regulator, LysR family n=1 Tax=Maricaulis maris MCS10 RepID=Q0ARX0_MARMM Length = 334 Score = 274 bits (702), Expect = 3e-72, Method: Composition-based stats. Identities = 66/316 (20%), Positives = 128/316 (40%), Gaps = 21/316 (6%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 S+ +DLNLL+ L ER+VT+AA+R+NV+ VS +L++LR F D LF+ +P G+ Sbjct: 4 MSLKHVDLNLLITFDALWHERNVTRAARRLNVSQPTVSNALSRLRLAFGDQLFLRAPRGI 63 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQIY 120 PT + +++ E ++ LD + +F + + +L L + Sbjct: 64 EPTERCSEIIKDVREALRHIEQALDSGPAFDAKQCRREFHIGCADYFDLFVLPDLLAYMA 123 Query: 121 QRYPQATIKLRNWD-YDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 + P ++LR+ D + +D + GE+D + + Sbjct: 124 EHAPMIDLRLRSVDIEEGMDLLDAGELDFMMHMEFPAA----------KRFGVRPVLHER 173 Query: 180 PCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFE 239 R HP + + ++ TF H++ +D VL LG R +A++ Sbjct: 174 HVFATRAGHPLVREAPDIATFASLSHVNFSQRGDSESPVDEVLARLGYRRRVAITTQHMT 233 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 + D L+ + R + + +P +++ P + W++R Sbjct: 234 TVAHLVKTTD-LVASVPSRMAARMVEEGGFAVYPIPFQIEKA-------PVAVYWNRRFE 285 Query: 300 HNPKIVWLRETIKNLY 315 + + W+R+ I Sbjct: 286 LDGAMRWMRDAIIEFC 301 >UniRef50_A6EW06 Transcriptional regulator n=2 Tax=Marinobacter RepID=A6EW06_9ALTE Length = 315 Score = 274 bits (702), Expect = 3e-72, Method: Composition-based stats. Identities = 67/310 (21%), Positives = 126/310 (40%), Gaps = 20/310 (6%) Query: 10 LNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMV 69 L LL +M ERSVT+AA R+ +T AVS +++++R ++DPLFV + PT + Sbjct: 6 LQLLYIFDAIMTERSVTRAADRLAMTQPAVSNAISRMRQIWNDPLFVRKGRNIEPTSYAL 65 Query: 70 SMEQNLAEWMQMSNLLLDK-PHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQATI 128 S+ + + M + F +A ++ ++ L + + P + Sbjct: 66 SLWDQVGDPMFALTNAVSATQFDPASARRTFRIAVTDVIVEMIWRQLIDLLEREAPGVDV 125 Query: 129 KLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKD 187 + + S D + VD+ +L+ ++ L + +R D Sbjct: 126 HAVPYTPEGSYDDLRSAHVDLAIG----------VLNQHDYSLRSTWLLDSGFVLAMRAD 175 Query: 188 HPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQ 247 HP + ++ FL H+ + ++D+ L + G+ R IA ++ F + + Sbjct: 176 HPLAGRQITMEEFLEARHLLVTMSGDAHGSVDSYLDQKGQSRRIAATMNHFASVPQVLRE 235 Query: 248 PDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWL 307 + L+ A Q + L + LP D L+WH R+ P I+W+ Sbjct: 236 SN-LIAAVPELISQDCGFVDGLWMGELPFDVD-------PTSLYLIWHARHDREPGIIWI 287 Query: 308 RETIKNLYAS 317 R I+ L + Sbjct: 288 RNHIERLLQA 297 >UniRef50_A9AQX4 Transcriptional regulator, LysR family n=20 Tax=Proteobacteria RepID=A9AQX4_BURM1 Length = 315 Score = 274 bits (701), Expect = 3e-72, Method: Composition-based stats. Identities = 73/321 (22%), Positives = 132/321 (41%), Gaps = 25/321 (7%) Query: 2 KKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLG 61 ++ +DLNL + + +R++T+AA+ +N+T AVS +LA++R +DPLFV++P G Sbjct: 17 AMRLSKIDLNLFVVFDAIYNKRNLTRAAELLNLTQPAVSNALARMRKTLNDPLFVSTPAG 76 Query: 62 LSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPR--GLKFELAAESPLMMIMLNALSKQI 119 + PTP ++ + E +Q+ + + + P F L+ ++L AL + + Sbjct: 77 MMPTPFAENIVGRVREALQLLDSSVHEGDVFDPASSERVFRLSMSDLTEALLLPALGELL 136 Query: 120 YQRYPQATIKLRNWDYDSLD-AITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSD 178 ++ P ++ D + A+ G VDI + L D Sbjct: 137 QRQAPGMHVRSYTMDRREIATALANGTVDIAIDAPLLG----------DPHLHQAPLVRD 186 Query: 179 VPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEF 238 +R HP T +D +L HI + + + +D L LG R I M + + Sbjct: 187 RYACMIRDGHPFKGDTLTMDDYLAMGHIHVSSRRKGSGHVDAELTRLGLRRNIQMRVQHY 246 Query: 239 EQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRN 298 + +A + D L A Q + ++ LP + + WH+ Sbjct: 247 MVAPLIAMRGDLALTAPLRLL-----QRYPARILELPFEMP-------GLEYFCYWHRSA 294 Query: 299 SHNPKIVWLRETIKNLYASMA 319 + WLRE + L M Sbjct: 295 DQDQANRWLRERLAELMRDMG 315 >UniRef50_B6JAE3 MexT protein n=1 Tax=Oligotropha carboxidovorans OM5 RepID=B6JAE3_OLICO Length = 311 Score = 274 bits (701), Expect = 4e-72, Method: Composition-based stats. Identities = 73/322 (22%), Positives = 141/322 (43%), Gaps = 25/322 (7%) Query: 1 MK-KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSP 59 M K++ LDLNLL+ + RS T AA +++++ AVS +L++LR DPLFV Sbjct: 9 MHQKNLARLDLNLLVVFDAIASARSTTLAATQLSLSQPAVSHALSRLRRLIGDPLFVRGR 68 Query: 60 LGLSPTPLMVSMEQNLAEWMQMSNLLL-DKPHHQTPRGLKFELAAESPLMMIMLNALSKQ 118 TP M + + + ++L + P F +AA M+ ++ L + Sbjct: 69 GRFVLTPRAEGMVLQVRDILNAVGVVLANAPFDPAENERTFRIAASDYTMLTIMPTLVRT 128 Query: 119 IYQRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSD 178 +++ P+A +++ + ++ + ++D + L LF + Sbjct: 129 LHRASPRAKLEVFSVGSQTIAQLESNDLD----------CTFWALKPPGAPYVTMPLFRE 178 Query: 179 VPCVWLRKDHPALH----QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMS 234 +L + HP LD ++ YPH+ + S+ +D L +GR+RTI ++ Sbjct: 179 SSKGFLDRRHPLAKPANRGRLTLDDYVGYPHVIAKFRDSNPSPVDVALAAVGRKRTIGLA 238 Query: 235 LPEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLW 294 F ++ + + L+AT P + + L LP+ + + ++L+W Sbjct: 239 SSSFIGNITALSGTN--LIATLPSRLSSIAESYGLKSFDLPIRIE-------DYTYSLVW 289 Query: 295 HKRNSHNPKIVWLRETIKNLYA 316 H+R +P +WLR+ I + Sbjct: 290 HQRTDADPACIWLRKVIAQTIS 311 >UniRef50_Q46T42 Regulatory protein, LysR:LysR, substrate-binding n=2 Tax=Burkholderiaceae RepID=Q46T42_RALEJ Length = 330 Score = 273 bits (700), Expect = 5e-72, Method: Composition-based stats. Identities = 67/318 (21%), Positives = 126/318 (39%), Gaps = 20/318 (6%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 D NLL +++ERSVT+AA ++ +T SA+S +L +LR +FDDPLFV + G+ Sbjct: 1 MHTDAFDYNLLTVFDAMLRERSVTRAAAQLGLTQSAMSHALNRLREFFDDPLFVKTAAGM 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQIY 120 +PT ++ + + + M + P F L ++ L L K++ Sbjct: 61 TPTIKAEALSETVLDVMTAMRTRVLPQASFDPATMQRTFTLCMTDMGELVFLPPLMKRLR 120 Query: 121 QRYPQATIKLRNWDYDSLD-AITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 P ++ ++ + G+ D+ + + P ++ + LF Sbjct: 121 VVAPHCKLRTLQVPVPQIEGLLASGDADLLLGS----------VQTAPESLFRQQLFMHG 170 Query: 180 PCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFE 239 + + + ++ F PH+++ + + D + G R I + P F Sbjct: 171 FVTIVSTKNRQVRDALTIEQFESMPHVTVSLAGRTSPSYDAAFESHGLRRNIYLHTPHFL 230 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 + Q L+AT P+ + + V + + WH R Sbjct: 231 SIPLLMEQ-QPELIATVPQELANVFSRYGIVRVV------KPPVVLPPYALSQYWHPRFH 283 Query: 300 HNPKIVWLRETIKNLYAS 317 H+P IVWLR+ +K + Sbjct: 284 HDPAIVWLRQLVKQTFDR 301 >UniRef50_C5CVL6 Transcriptional regulator, LysR family n=5 Tax=cellular organisms RepID=C5CVL6_VARPS Length = 327 Score = 273 bits (699), Expect = 6e-72, Method: Composition-based stats. Identities = 84/325 (25%), Positives = 140/325 (43%), Gaps = 25/325 (7%) Query: 1 MKKS--ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNS 58 M+ +DL+L+ L ++ +RSV++AA R+ + AVS +L +LR DPL V S Sbjct: 1 MRDQALFDKIDLHLIRVLHTVLTDRSVSRAAIRLGMYQPAVSAALKRLRELSGDPLLVRS 60 Query: 59 PLGLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTP--RGLKFELAAESPLMMIMLNALS 116 G+ PT + M + A ++ + +L P F +AA + + L L Sbjct: 61 GSGMVPTDAGLRMIEPAASILRAAEMLFSDARGFEPQSAATTFRIAASDYMDPLFLPMLV 120 Query: 117 KQIYQRYPQATIKLRNWDYDS--LDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEV 174 + + P I++ DS + G+VD+ P + Sbjct: 121 AHVKREAPLCQIEIHALTPDSDYHGHLALGQVDLVIGNWLKP----------PEDLHMAR 170 Query: 175 LFSDVPCVWLRKDHPALHQTWNLDTFLRYPHISICW-EQSDTWALDNVLQELGRERTIAM 233 LF D + +DHPA+ + W+L+T+L HI+ +D +L ELGR+R I Sbjct: 171 LFGDEVVSLVNQDHPAVRRGWDLETWLAAEHIAPTPMHPGGRGIIDQMLDELGRQRNITA 230 Query: 234 SLPEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLL 293 F M A L+L T +YC+ + + ++ P+ + L Sbjct: 231 RCAHFSLIPDMVASS-LLVLTTGRQYCERFAARLPVKILECPVALPRLM-------YYQL 282 Query: 294 WHKRNSHNPKIVWLRETIKNLYASM 318 WH+R + WLRE IK++ AS+ Sbjct: 283 WHERTHSSSSARWLRECIKDVAASL 307 >UniRef50_B7V4S2 Probable transcriptional regulator n=7 Tax=Pseudomonas aeruginosa RepID=B7V4S2_PSEA8 Length = 304 Score = 273 bits (699), Expect = 7e-72, Method: Composition-based stats. Identities = 69/318 (21%), Positives = 123/318 (38%), Gaps = 20/318 (6%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 + +DLNLL+ L L+ ER V++AA+R+ ++ AVS +L +LR F DPL V + Sbjct: 5 HDLRRIDLNLLVVLDALLSERHVSRAAQRLAMSQPAVSHALGRLRELFGDPLLVRVKSRM 64 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLL-DKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQ 121 T L + + L + ++ F L ++L AL +Q Sbjct: 65 QLTSLALELAPKLQASLDQVRGVIGGPTFEPVRSRRHFRLGMSDYGAWVVLPALLRQQQA 124 Query: 122 RYPQATIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 P + + ++ + G++D + LP + LF + Sbjct: 125 LAPGVSFGIVQEPRLETARQVAEGQLDCALG----------VFPLLPEGVRARRLFEERF 174 Query: 181 CVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQ 240 R+ +LD +L H+ + + + +D+ L++ G R +A++LP F Sbjct: 175 VCVCRRSLFDRPDGLSLDRYLAARHVRVSLQDNPAEEVDSALEKRGLRRQVALTLPHFTV 234 Query: 241 SLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 + + A D L+L A R + +L L PL + +W Sbjct: 235 APALLAGTD-LVLTIAERTLERLRLPEELALCEPPLAIP-------RFDYVQIWRGDAER 286 Query: 301 NPKIVWLRETIKNLYASM 318 WLRE I+ + Sbjct: 287 EAAGAWLREQIQAAARKI 304 >UniRef50_B7VQ45 Transcriptional regulator n=8 Tax=Vibrionales RepID=B7VQ45_VIBSL Length = 311 Score = 273 bits (699), Expect = 7e-72, Method: Composition-based stats. Identities = 94/312 (30%), Positives = 139/312 (44%), Gaps = 9/312 (2%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 KS+ D+NLLLCL +L++ERSV+K A+R+ ++ SAVSK L KLRA FDDPLF GL Sbjct: 5 KSLLKCDMNLLLCLHVLIEERSVSKTAERLFLSQSAVSKQLTKLRALFDDPLFERESKGL 64 Query: 63 SPTPLMVSMEQNLAEWMQMSNLL-LDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQ 121 PTP +++ + + + L + + F + + Sbjct: 65 FPTPKALALAPKIHQILLQIEKLTVPEVFDPKDSERTFTIDLVETAYTAIYPHFMPTALA 124 Query: 122 RYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPC 181 P TI W DS + + EVD G E R+ + +P +DY L D Sbjct: 125 DAPHITINSSTWSSDSFKRLLKREVDFGIGIFELDERASTHVQCIPDELDYVELCLDYSV 184 Query: 182 VWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQS 241 +R DHPAL + WNL TFL+Y HI + + W L VL E A ++ + + Sbjct: 185 CLMRNDHPALQEEWNLGTFLKYRHIQLVTGGAGDWLLMEVLNSKQLEINKAANVSDITSA 244 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 + + Q D L+ + Y +L + +P+ + LLWHK Sbjct: 245 IKLCKQSDLLM-CYPYNSVRDYIDSGELVMKPVPVDL-------VPGGLFLLWHKYFDSE 296 Query: 302 PKIVWLRETIKN 313 P WLR+ I Sbjct: 297 PSHKWLRDLIIE 308 >UniRef50_D1RUJ7 Transcriptional regulatory protein n=1 Tax=Serratia odorifera 4Rx13 RepID=D1RUJ7_SEROD Length = 313 Score = 273 bits (698), Expect = 8e-72, Method: Composition-based stats. Identities = 55/318 (17%), Positives = 121/318 (38%), Gaps = 19/318 (5%) Query: 1 MKKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPL 60 M+ L +N+L L ++ R+++ AA+++N + +S+ LA+LR F DPL V Sbjct: 1 MRTQFAALSINMLQVLHAVLTTRNLSHAAEKLNSSQPQLSRQLAQLREAFGDPLLVRHGR 60 Query: 61 GLSPTPLMVSMEQNLAEWMQMSNLLLD-KPHHQTPRGLKFELAAESPLMMIMLNALSKQI 119 +P + L + + L F A+ + ML L + Sbjct: 61 EYVLSPRGQEIILPLEKLINELKELSQKPEFEPLLCSRCFRFASSDYVAEHMLPQLVDYL 120 Query: 120 YQRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 P+ +++ W + + E+D+ ++ P + +L DV Sbjct: 121 QTVAPKVSVEYFTWKPNDYPLLANAELDLA----------TTMIKEAPSGLRGRILGEDV 170 Query: 180 PCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFE 239 P + H + + + H+ + +D L+E G R +A+++P F Sbjct: 171 PVCVMSARHVLAGKALEAKDYASWRHVRVSGGGDKDSFIDRELKEYGIYRQVALTVPFFS 230 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 ++ + + + LL+ + + ++ + + + ++WH+R Sbjct: 231 AAMEVVSSSN-LLVTIPKHIAIMMAGKYNVTWCSIDFVKESHR-------YWMIWHERTH 282 Query: 300 HNPKIVWLRETIKNLYAS 317 P+ W R ++ + A Sbjct: 283 MAPEHKWFRNVVREIVAG 300 >UniRef50_B1J7P4 Transcriptional regulator, LysR family n=5 Tax=Pseudomonas RepID=B1J7P4_PSEPW Length = 314 Score = 273 bits (698), Expect = 8e-72, Method: Composition-based stats. Identities = 79/320 (24%), Positives = 135/320 (42%), Gaps = 22/320 (6%) Query: 1 MKKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPL 60 M + +L L L L L+Q ++++ AA+R+ V+ SA+S+ LA LR FDDPL V Sbjct: 1 MNPTFASLSLAHLRTLDCLLQLKNLSHAAERLGVSQSALSRQLAHLREAFDDPLLVRQGR 60 Query: 61 GLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPR--GLKFELAAESPLMMIMLNALSKQ 118 G + ++ + L + ++ L +P P +F LAA + ML L Sbjct: 61 GYVLSEYGQALVEPLRQVLEELQ-ALRQPAAFDPARCERRFCLAASDYVAEHMLPLLVAA 119 Query: 119 IYQRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSD 178 + Q P +I R W + GE+D+ L P + +L D Sbjct: 120 LEQEAPGVSIDYRTWQAGQYALLASGEIDLA----------TTLFDESPANLHGRLLGED 169 Query: 179 VPCVWLRKDHPALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPE 237 +R+DHP + + D +L + H+ I +D L+ G +R I++ +P Sbjct: 170 RAVCLMRRDHPLTACEVLSQDDYLAFKHVRISGGGDKDSFIDRHLRTQGLQRRISLEVPF 229 Query: 238 FEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKR 297 F ++ + L + +LH L PL F E Q+ + ++WH+R Sbjct: 230 FSATVQVVGNS-QALATVPEHIARQLCRLHGLA--WRPLGFVEHTQR-----YWVVWHQR 281 Query: 298 NSHNPKIVWLRETIKNLYAS 317 + + WLR + L+ Sbjct: 282 LQASAEHRWLRNRVFELWRQ 301 >UniRef50_Q5LKP3 Transcriptional regulator, LysR family n=1 Tax=Ruegeria pomeroyi RepID=Q5LKP3_SILPO Length = 324 Score = 272 bits (697), Expect = 9e-72, Method: Composition-based stats. Identities = 72/319 (22%), Positives = 129/319 (40%), Gaps = 24/319 (7%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 + LDLNLL+ + + +++ AAKR+NV+ +S +LA+LR DPLF+ S G+ Sbjct: 1 MDLRKLDLNLLVTFEAIYTAGNISHAAKRLNVSQPTISNALARLRDTVGDPLFIRSGRGV 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQIY 120 +PTP M + + +QM P F + L I++ L + + Sbjct: 61 APTPRATGMIGPVRDALQMIQSGFGDDERFDPSTTRRNFRIVVLDMLEPILMPPLVRAV- 119 Query: 121 QRYPQATIKLRN-WDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 Q Y T+++ D+ + + G +D+ + + I+ E + + Sbjct: 120 QDYRSVTLEMLPVMDFPIAEGLNDGSLDLALTTFDPQ----------HGDIECEQVGAAK 169 Query: 180 PCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFE 239 + RK HP + H+++ + +D VL+ +R I + F Sbjct: 170 IVIVARKGHPRIKGEMTPALVSEIGHVALIPKIRALSRVDEVLRYAKIDRHIVYMVTRFW 229 Query: 240 QSLFMAAQPDNLLLATAP-RYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRN 298 + A D L+A P + + + L + +P F E ++W KR+ Sbjct: 230 SFPHILANSD--LIAMMPGDFAAHAALFYPLDIFPVPFEFPEQ-------HIYMIWKKRH 280 Query: 299 SHNPKIVWLRETIKNLYAS 317 +P WLRE I Y Sbjct: 281 GLDPGHTWLREKIVEAYRE 299 >UniRef50_Q210Z5 Transcriptional regulator, LysR family n=2 Tax=Alphaproteobacteria RepID=Q210Z5_RHOPB Length = 301 Score = 272 bits (696), Expect = 1e-71, Method: Composition-based stats. Identities = 72/308 (23%), Positives = 134/308 (43%), Gaps = 21/308 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 LDLNLL+ L L+ E SV AA R+N++P A+S+ LA++R +DP+ V + GL TP Sbjct: 10 LDLNLLVTLDALLSEGSVAGAANRMNLSPPAMSRQLARIRHLMNDPVLVRAGRGLVATPR 69 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQIYQRYPQ 125 ++ + + +Q + L+ P F + + + A+ + + Q+ P Sbjct: 70 AEAVRAQVRQLVQDAEGLVRGNADLDPATIERTFTIRSSDGFVGTFGAAIVELVVQQAPN 129 Query: 126 ATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 A ++ + +D++ G VD+ ++ + I + LF D +R Sbjct: 130 ARLRFVGEGNEDVDSLRDGRVDLDIG----------VIDGMGPEIRLQTLFRDRYIGVVR 179 Query: 186 KDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMA 245 DHP +T ++ F+ YPH+S+ +D L G RT+++++ L + Sbjct: 180 ADHPLAQETVTIENFVAYPHVSVSRRGRFEGPVDTALALQGMRRTVSVAVANVADGLSIV 239 Query: 246 AQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIV 305 ++ D+++L Y H F+ P ++ WH R + Sbjct: 240 SRSDHIVLLPGRIAAWYRRDFHG---------FELPVVTDELPPISIAWHPRFEKDAAHR 290 Query: 306 WLRETIKN 313 WLR ++ Sbjct: 291 WLRTCVRE 298 >UniRef50_Q1MWN1 LysR-type regulatory protein n=1 Tax=Sphingomonas sp. A4 RepID=Q1MWN1_9SPHN Length = 302 Score = 272 bits (696), Expect = 1e-71, Method: Composition-based stats. Identities = 73/316 (23%), Positives = 125/316 (39%), Gaps = 21/316 (6%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 I +DLNLL + + Q R V +AA+ + ++ AVS +L KLR +D LFV + G+ P Sbjct: 4 IRDVDLNLLRVFECVFQTRKVVEAAEILGISQPAVSNALKKLRELLNDELFVRTRSGMIP 63 Query: 65 TPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQIYQR 122 T + + + ++ ++ + ++ PR F +A M L I Sbjct: 64 TQYAMQLAEPISYALKTLEIAIEASESFDPRRDKRHFVIATSDLGDMYFGPKLISHIRDI 123 Query: 123 YPQATIKLR-NWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPC 181 TI+ N +++ GEVDI R + + LF Sbjct: 124 SQDITIEFVGNSRPHIFESLENGEVDILLGFRPDLITNMFVF----------RLFYQGWR 173 Query: 182 VWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQS 241 + RKDHP + L I + E S + +++ L ++G +R I + F Sbjct: 174 ILARKDHPIFSSKAPREDLLACRWIGVRSEGSGSASVNAELLKVGMDRNIVVWTSNFGTL 233 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 + A D L A P L ++P P D + + +WH + ++ Sbjct: 234 APLLAVGD--LAACVPEIYTTVID-EAFGLKSMPFPVDLPKH-----SISSVWHSKAHND 285 Query: 302 PKIVWLRETIKNLYAS 317 P WLR+ + L+ Sbjct: 286 PANQWLRQQVSILFKE 301 >UniRef50_A3VAM0 Nodulation protein d1 n=1 Tax=Rhodobacterales bacterium HTCC2654 RepID=A3VAM0_9RHOB Length = 312 Score = 272 bits (696), Expect = 1e-71, Method: Composition-based stats. Identities = 70/322 (21%), Positives = 129/322 (40%), Gaps = 21/322 (6%) Query: 1 MKKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPL 60 M LDLNLL+ L +L++E++V++AA+++ ++ SA S +LA+LR +F+D L V Sbjct: 1 MDMRFKGLDLNLLVALDVLLREKNVSRAAEKLFLSQSATSGALARLREYFNDDLLVQVGR 60 Query: 61 GLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQ 118 + TP ++ + + + + + P + + + + +L ++ Sbjct: 61 QMVLTPRATALSGKVRSALVQIDGTIIQSPEFDPSTAVRILRIISSDFITISVLREAVRE 120 Query: 119 IYQRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSD 178 I + P TI ++ + I RGEVD+ + E F+D Sbjct: 121 IGKSAPGLTIDIQQPANKPHEKIERGEVDLLLMPELY----------ISPDHPSEQFFTD 170 Query: 179 VPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQ-ELGRERTIAMSLPE 237 V + T D F H ++ +E +Q + GRER IA+ + Sbjct: 171 DYVVIAWSGNTQFGDTITEDQFFAARHATVMFESHTPSYEAWFIQNKDGRERDIAIVVGS 230 Query: 238 FEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKR 297 F FM D L L + + L L+ P+ + ++ WH Sbjct: 231 FSALPFMIEGTDYLAL-MHRSMADIFARQMPLRLLRCPIDIP-------PLVESIQWHTY 282 Query: 298 NSHNPKIVWLRETIKNLYASMA 319 + + + W+RE I +A Sbjct: 283 SDGDECLAWVREKIHEQARGLA 304 >UniRef50_Q13GK2 Transcriptional regulator, LysR family n=1 Tax=Burkholderia xenovorans LB400 RepID=Q13GK2_BURXL Length = 311 Score = 272 bits (696), Expect = 2e-71, Method: Composition-based stats. Identities = 81/321 (25%), Positives = 133/321 (41%), Gaps = 24/321 (7%) Query: 1 MKKSIT--TLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNS 58 M+++ TLD+ LLL L++ERSV++AA + +T SAVS+ L +LR F DPLF+ + Sbjct: 1 MRRNPRVDTLDIKLLLVFDALLRERSVSRAADDVGLTQSAVSQKLGRLRDIFSDPLFIRT 60 Query: 59 PLGLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALS 116 G+ PTP + + LAE + L+ P F +A + L + Sbjct: 61 ANGMEPTPHALVLSAQLAELLARWKSLVSSQQRFEPATAERNFRVALSDGMSYHCLPPVV 120 Query: 117 KQIYQRYPQATIKLRNWDYDSLDA-ITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVL 175 ++I + P I + + I G D+ + P+ I L Sbjct: 121 RRIREIAPNLRITIVHVGPRGGQREIESGSADLALG----------VFQQPPIGISTCEL 170 Query: 176 FSDVPCVWLRKDHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMS 234 F K++P L T + D +L HI++ ++ +++ LG +R IA+ Sbjct: 171 FRYTLQCVADKNNPRLKQGTMSRDEYLEASHIAVGENNVPGTLVEVIVEALGLKRKIALV 230 Query: 235 LPEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLW 294 P F + D L+ T P Q L P+PF S+ + +W Sbjct: 231 TPHFVSIPNLVLGTD--LIGTFPSSAQD-AYPFSNQLCFFPIPFPISESIAM-----AMW 282 Query: 295 HKRNSHNPKIVWLRETIKNLY 315 H R +P +WLR + Sbjct: 283 HPRFDGDPGHMWLRNLFADTL 303 >UniRef50_Q13JD9 Transcriptional regulator, LysR family n=1 Tax=Burkholderia xenovorans LB400 RepID=Q13JD9_BURXL Length = 305 Score = 272 bits (696), Expect = 2e-71, Method: Composition-based stats. Identities = 65/316 (20%), Positives = 123/316 (38%), Gaps = 22/316 (6%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 + DLNL+ + + SV+ AA+R+N+T VS +L++LR DPLF + G+ Sbjct: 6 MQTASTDLNLIRAFVAIYETGSVSAAARRLNLTQPTVSYALSRLRTLLHDPLFSRTREGM 65 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQT--PRGLKFELAAESPLMMIMLNALSKQIY 120 +PT + + + + + + F +A + L + +++ Sbjct: 66 APTFNASQLYETFRQALDRIEGAIAATRYFDAATSTRCFRIALSDLGELYFLPRMVERLQ 125 Query: 121 QRYPQATIKLRNWD-YDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 + P +++ D + + + G++D L + LFS+ Sbjct: 126 RTAPGVELEVVQLDVERTAEWLNTGQIDAAVGN----------LHLVGGKARRRYLFSET 175 Query: 180 PCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFE 239 + HP + T +L ++R H+ + S +++V+ +G R IA+ +P F Sbjct: 176 YSCLVSHRHPWIGTTLSLGDYVRAKHV-VGASSSGHRLVEDVMTGMGLSRKIALRVPHFT 234 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 + + A D L+L R Y + + LP+P D L W R + Sbjct: 235 NVVDVVAGSD-LVLTLPARVANVYQSTGTVRALPLPVPVD-------PFDVNLYWQDRAT 286 Query: 300 HNPKIVWLRETIKNLY 315 WL E I Sbjct: 287 DLSAQKWLCEIIAETL 302 >UniRef50_A1U2R6 Transcriptional regulator, LysR family n=3 Tax=Marinobacter RepID=A1U2R6_MARAV Length = 300 Score = 271 bits (694), Expect = 2e-71, Method: Composition-based stats. Identities = 75/315 (23%), Positives = 132/315 (41%), Gaps = 22/315 (6%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 ++ DLNLL + +E S+T+AAK +++T A+S SLA+LR F+DPLF + Sbjct: 1 MALNRPDLNLLHVFDTIYREGSLTRAAKALHLTQPAISHSLARLRDHFNDPLFTRQGNQM 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFE--LAAESPLMMIMLNALSKQIY 120 PTPL +++ + +++ H P + L L L L ++ Sbjct: 61 VPTPLARRFLESMRPGLNQIQSAVNQFHAFDPASQRKTYALGLRDVLESTFLPQLISKLA 120 Query: 121 QRYPQATIKLRNWDYDSLD-AITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 YP ++ + ++ + G++D ++L + +E+L D Sbjct: 121 P-YPDMEVQSQRVARRDMETQLAAGKLDFAI----------DVLLPVSNQTSHELLRQDR 169 Query: 180 PCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFE 239 V RK HP + Q ++ ++L HI + D L G +RTI + + Sbjct: 170 LVVLARKGHPVIAQGLDMASYLEARHILVSSRAEGPGIEDFELSRHGAQRTIRLRCQHYY 229 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 + + D LLL Y + Q + ++A P+ + L WHK Sbjct: 230 AACRVVESSD-LLLTMPETYARIIAQNTDIEVLAPPVEMP-------SIDVHLYWHKAYE 281 Query: 300 HNPKIVWLRETIKNL 314 P +VW R+ ++NL Sbjct: 282 QEPALVWFRDLLRNL 296 >UniRef50_B7RYN1 Transcriptional regulator, LysR family protein n=1 Tax=marine gamma proteobacterium HTCC2148 RepID=B7RYN1_9GAMM Length = 303 Score = 271 bits (694), Expect = 2e-71, Method: Composition-based stats. Identities = 69/320 (21%), Positives = 136/320 (42%), Gaps = 25/320 (7%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 ++ ++DLNLL ++ E SVT+AA++I ++ A+S +L + R D LF + GL Sbjct: 1 MNLRSVDLNLLTVFDAVITEGSVTRAAEKIGMSQPAMSIALTRFRHIAKDELFERTGRGL 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQT--PRGLKFELAAESPLMMIMLNALSKQIY 120 PTP + + + + + L+ F + ++ML L +++ Sbjct: 61 RPTPRALELAAPIRRALDIVTDALEHGTDFDMSRSDRSFSVVLSGIGEIVMLPTLMRRLE 120 Query: 121 QRYPQATIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 + I R+ D L + G VD+ ++ I + + Sbjct: 121 STGSRININTRHVAHGDMLKEMHFGNVDL----------YMWIVPIESSEIICTQIGNTS 170 Query: 180 PCVWLRKDHPALHQTWNLDTFLRYPHISICWEQS-DTWALDNVLQELGRERTIAMSLPEF 238 +R DHP + + +++ F H++ + +D L LG +R +MS+ + Sbjct: 171 EVCLVRADHPYVGDSLSVNEFAALRHVTFHMPGTYGPSIIDRELWRLGLKREHSMSVHSY 230 Query: 239 EQSLFMAAQPDNLLLATAPRYC-QYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKR 297 + + +Q D ++ T PR +++ ++H L +V PL + P +LW K Sbjct: 231 FDAPRVLSQTD--MVCTMPRVLGRHFARVHGLKMVRSPLQLE--------FPVFMLWPKA 280 Query: 298 NSHNPKIVWLRETIKNLYAS 317 + WLRET+ +++ Sbjct: 281 AEKDKGHQWLRETLIDIFKQ 300 >UniRef50_C9PC13 Transcriptional regulator LysR family n=1 Tax=Vibrio furnissii CIP 102972 RepID=C9PC13_VIBFU Length = 310 Score = 271 bits (694), Expect = 2e-71, Method: Composition-based stats. Identities = 76/321 (23%), Positives = 138/321 (42%), Gaps = 22/321 (6%) Query: 1 MKKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPL 60 MKK +DLNL+ + + +SV A R+N++ SA S SLA+LR+ +D LF+ Sbjct: 1 MKK-FDNIDLNLMKVFYYVYETQSVQMTADRLNISQSACSHSLARLRSRLNDELFIRING 59 Query: 61 GLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPR--GLKFELAAESPLMMIMLNALSKQ 118 + PT + Q++ +++ L+ P F ++ ++ L+ Sbjct: 60 KMIPTNQAEQLAQSIQPALELLYSGLNTATPFDPAVGQHHFVISGYDFSAWCVMPTLTAY 119 Query: 119 IYQRYPQATIKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFS 177 + + +P T++L D + + GE+D+ +S + +++ S Sbjct: 120 LAEHFPNITVRLVQSDKQIPTEHLESGEIDLSLGFDHEAEQSNHIGNAI--------WQS 171 Query: 178 DVPCVWLRKDH--PALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSL 235 C+ + H + +LDTFL YPH+ + +D L +L ++R +A++L Sbjct: 172 GQYCIAMDNQHDALMAGRPLDLDTFLAYPHVLVTPWNEPRGIVDATLGKLNKKRQVAVTL 231 Query: 236 PEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWH 295 P + F+ + L A Y + QL VA P+P + L WH Sbjct: 232 PSVLSAPFLLKGTNYFLAA-PESYLETLADTLQLAFVAPPIPIP-------QYHIKLYWH 283 Query: 296 KRNSHNPKIVWLRETIKNLYA 316 K +PK+ WL + +L A Sbjct: 284 KVREKDPKVNWLIHRLCDLAA 304 >UniRef50_Q1N663 Regulatory protein, LysR:LysR, substrate-binding n=1 Tax=Bermanella marisrubri RepID=Q1N663_9GAMM Length = 306 Score = 271 bits (693), Expect = 3e-71, Method: Composition-based stats. Identities = 72/312 (23%), Positives = 129/312 (41%), Gaps = 20/312 (6%) Query: 7 TLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTP 66 +DLNL + + E S+T+AA+R+N+T A+S +L++LR DDPLFV + PTP Sbjct: 2 KIDLNLFTVFEAIYLEGSLTRAAERLNLTQPAISHALSRLRERLDDPLFVRQGHKMRPTP 61 Query: 67 LMVSMEQNLAEWMQMSNLLLDKPHHQTPRGL--KFELAAESPLMMIMLNALSKQIYQRYP 124 L + ++ ++ N L + HH P + +A + +L + K + P Sbjct: 62 LAQKLIPDIQAALRQLNGALQQSHHFNPAEAEKTYRVAMRDVMEATLLPPVLKGLDNIAP 121 Query: 125 QATIKLRNWDYDSLDA-ITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVW 183 + + + +++ + GE+D ++L I + L +D V Sbjct: 122 NIQLASVHIERRDMESKLASGELDFVV----------DVLLPTSEQIYKKKLLNDELVVI 171 Query: 184 LRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 L + + + +LR HI + S +D L G R +A+ + + Sbjct: 172 YNPALSQLPEGFTEEEYLRAKHILVSTRASGPSLVDYALSAEGLNRNVALRCQHYYAACQ 231 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 +A DN +L T P H L LPF K + L WH+ + + Sbjct: 232 VA--SDNGMLLTMPSRYASILLQHFPTLQRSSLPF-----KTSSIDVYLYWHESLNEDGA 284 Query: 304 IVWLRETIKNLY 315 W R+ ++ + Sbjct: 285 NAWFRDMLQQVL 296 >UniRef50_A1VMI6 Transcriptional regulator, LysR family n=28 Tax=Bacteria RepID=A1VMI6_POLNA Length = 333 Score = 271 bits (693), Expect = 3e-71, Method: Composition-based stats. Identities = 69/299 (23%), Positives = 110/299 (36%), Gaps = 23/299 (7%) Query: 20 MQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSMEQNLAEWM 79 RSVT+AA+++ + VS LA+LR DPLFV +P G+ PTP ++ + E + Sbjct: 53 YNTRSVTRAAEQLGQSQPTVSIWLARLRRQLGDPLFVRTPEGMLPTPRTDALIATVREVL 112 Query: 80 QMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQIYQRYPQATIKLRNWDYDS 137 + L + P F + + +L L + PQ ++ D Sbjct: 113 EGLRRLSESESRFDPATAQRGFRIFMTDASHITLLPRLFSHVRALAPQVRLEAATIDARM 172 Query: 138 LDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPALHQTWNL 197 A+ GE D+ L+ L + LF HP + + + L Sbjct: 173 APALQSGEGDLALG----------LVPGLEAGFYQQTLFGQDWICLCNARHPRIGEMFTL 222 Query: 198 DTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQPDNLLLATAP 257 + HI I + LD L+ G R + + LP F + + D L+AT P Sbjct: 223 QDYAAEAHIGI-VSGTGYQLLDGALKSQGIARRVLLELPGFLGLAAILSTSD--LVATLP 279 Query: 258 RYC-QYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWLRETIKNLY 315 R+ + L ++ P WH R H+ WLR L+ Sbjct: 280 RHIGETLANAAGLRVLPCPFEIP-------GFTVKQYWHARYHHDAGNRWLRGVCAELF 331 >UniRef50_A1U8Q8 Transcriptional regulator, LysR family n=1 Tax=Marinobacter aquaeolei VT8 RepID=A1U8Q8_MARAV Length = 312 Score = 270 bits (692), Expect = 4e-71, Method: Composition-based stats. Identities = 78/323 (24%), Positives = 136/323 (42%), Gaps = 29/323 (8%) Query: 1 MKKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPL 60 MK + DLNLL L E++VT+A +R++++ +VS +L +LR F DPLF+ Sbjct: 1 MKLNY---DLNLLRTFHALYLEQNVTRAGERLHLSQPSVSAALGRLRELFKDPLFIRDRQ 57 Query: 61 GLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQ 118 + PT + + + + L+ +P FE+AA +++L AL+ Sbjct: 58 RMRPTETADHLFPVIEAALTDLDGLITSERDFSPATEQRHFEIAANDYFEVLILPALASV 117 Query: 119 IYQRYPQATIKLRNWDYDSLDA-ITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFS 177 + ++ P T+++R D +A I G D+ F + P + + + I+ Sbjct: 118 LREQAPGITLQVRRLSQDMSEAGIMSGTTDLAFGRQVDPPDNLVVREVILEGIE------ 171 Query: 178 DVPCVWLRKDHPALH-----QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIA 232 + +HP L D F RY H+ I + L+ +R +A Sbjct: 172 ----CLVGNEHPLLERLKGNGQMTRDDFERYAHVLIQPHTRLKSGIFKQLESQNLKRKVA 227 Query: 233 MSLPEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTL 292 +++ F + +L+ + CQ++ + + VA P+ FD PF L Sbjct: 228 LAVTYFMAVPALLEGS-SLIASLPTGLCQHFRRQFAVTPVAPPVAFDA-------FPFHL 279 Query: 293 LWHKRNSHNPKIVWLRETIKNLY 315 WH R +P WLRE I Sbjct: 280 SWHHRYQKDPAHRWLREQIIACC 302 >UniRef50_A3YHF6 Transcriptional regulatory protein n=2 Tax=Gammaproteobacteria RepID=A3YHF6_9GAMM Length = 308 Score = 270 bits (692), Expect = 4e-71, Method: Composition-based stats. Identities = 67/314 (21%), Positives = 132/314 (42%), Gaps = 19/314 (6%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 + DLNL++ +M+E+S+T AA + +T +VS +++++R + DPLFV G+ P Sbjct: 1 MAKTDLNLVVIFDAIMKEKSITSAADSLAMTQPSVSNAVSRMRHAWKDPLFVKEGRGIRP 60 Query: 65 TPLMVSMEQNLAEWMQMSNLLLDKP-HHQTPRGLKFELAAESPLMMIMLNALSKQIYQRY 123 TP + + +AE + N + F + I+ L I Q Sbjct: 61 TPYATKLWKRVAEPLAQINHAIAPEYFDPLTSKASFRIGITDGSASIVWPELRHIIEQEA 120 Query: 124 PQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVW 183 P I + D + +VD+ F + + I Y+ ++ + Sbjct: 121 PNINIYAVPYKVDGELLLNNADVDLVFDYYDGN----------SDEIFYKSMYENQFVTV 170 Query: 184 LRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 +R DH ++ L+ +++ H+ + +D+ L EL +R AM++ F ++ Sbjct: 171 MRADHELANEELTLERYIKSEHLLVSLSGDVCGIVDDKLAELNAKRRTAMTVNSFASAIN 230 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 + Q ++ P ++ LV P+P + + +L WH RN+H+ Sbjct: 231 LIKQTRLIITMPYPIIAEHLAAG---DLVLKPVPLELP-----SIKISLAWHSRNNHSQA 282 Query: 304 IVWLRETIKNLYAS 317 + WL + + + S Sbjct: 283 LKWLIKVLDRIIDS 296 >UniRef50_Q15XJ4 Transcriptional regulator, LysR family n=1 Tax=Pseudoalteromonas atlantica T6c RepID=Q15XJ4_PSEA6 Length = 299 Score = 270 bits (691), Expect = 5e-71, Method: Composition-based stats. Identities = 53/319 (16%), Positives = 131/319 (41%), Gaps = 23/319 (7%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 LDLNLL+ L L+ ER+VT+A +RI+++ S +S ++++LR +FDD LFV L Sbjct: 1 MRFKGLDLNLLVALDALIAERNVTRAGERIHLSQSGMSSAVSRLRQYFDDELFVQVGREL 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPR--GLKFELAAESPLMMIMLNALSKQIY 120 PT L ++ + + + + P + +AA M+++ + ++ Sbjct: 61 IPTSLTETLAKPVRRILVEMENTIISRPKFDPASDERCYRIAASELTTMVLMPTVISRLA 120 Query: 121 QRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 Q P + L D + +G++D+ ++ ++ ++ + Sbjct: 121 QDAPNIRLNLSTIGET--DLLDKGDIDLMIIPKQFTQ----------DGHPFDEIYQEGY 168 Query: 181 CVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQEL-GRERTIAMSLPEFE 239 +++ ++ + + + H+ + + +++ A D+ G R + + Sbjct: 169 KCICWQENTSIGEKITFEDYQSAGHVVVSYGKNNAPAFDSWFMSHYGISRRVEIMTSNLL 228 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 + + R Q +Q + ++ P+ + ++ +H+ Sbjct: 229 APPSLIIGTQRIA-TVHSRLAQIVSQSLPIRVLQPPIEIP-------PLTQSMQYHRNRE 280 Query: 300 HNPKIVWLRETIKNLYASM 318 ++ + WLR+ I ++ ++ Sbjct: 281 NDVGLSWLRQLIIDVAKTI 299 >UniRef50_A9FJR3 Transcriptional regulator, LysR family n=2 Tax=Sorangium cellulosum 'So ce 56' RepID=A9FJR3_SORC5 Length = 306 Score = 269 bits (690), Expect = 7e-71, Method: Composition-based stats. Identities = 64/316 (20%), Positives = 132/316 (41%), Gaps = 20/316 (6%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 + +DLNLL L ++ ER+VT+AA+R+ +T AVS +L +LR F+D L V ++P Sbjct: 9 LRAVDLNLLTVLDAVLTERNVTRAAERLGMTQPAVSSALNRLRLLFNDDLIVRRGKEMAP 68 Query: 65 TPLMVSMEQNLAEWMQMSNLLLDKPHHQT-PRGLKFELAAESPLMMIMLNALSKQIYQRY 123 TP +++ + + + + L F L ++L + + Q Sbjct: 69 TPRALALAGPIRKALDLIQASLAHTGAFDCTASRTFRLGITDIGEALLLPRFLQWLEQLG 128 Query: 124 PQATIKLRNWDYDSLD-AITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCV 182 + + SL + G++++ + ++ + Sbjct: 129 ARVRLDFCREPGTSLQNEMRLGKIELVL----------DHIAIPGEEFRRTRVLDLEFVT 178 Query: 183 WLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 +R+DHP + + LD ++ H+ I + T + + +GR R + + +P + Sbjct: 179 LVRQDHPTVGPSLTLDEYMALEHVIIEPREGQTNLAEQIQAAVGRARCVRVQVPRYLSMP 238 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 F+ +Q + + P + + Q + +V+ PLP +P ++WH +P Sbjct: 239 FIVSQSNLVCTLPLP-LARLFEQHFPVRVVSCPLPI-------QPIPLFMMWHACQDGDP 290 Query: 303 KIVWLRETIKNLYASM 318 WLR ++ L + + Sbjct: 291 AHEWLRRSLIELCSRV 306 >UniRef50_A9C385 Transcriptional regulator, LysR family n=2 Tax=cellular organisms RepID=A9C385_DELAS Length = 332 Score = 269 bits (690), Expect = 7e-71, Method: Composition-based stats. Identities = 85/316 (26%), Positives = 143/316 (45%), Gaps = 21/316 (6%) Query: 4 SITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLS 63 ++ ++DLNLL+ + L++ERSV KAA R+ +T SAVS +L +LR F+DPL + + G+S Sbjct: 16 NLRSIDLNLLVIFEALVEERSVGKAAARLGITSSAVSHALRRLRTQFNDPLLLRTAEGMS 75 Query: 64 PTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQIYQ 121 PTP V + ++ + ++ P F L + +++L L + Sbjct: 76 PTPEAVRLARSFRKAFSEIESAIEVSKGFDPATARRNFHLRLSDYVGVLLLPQLCIHLRA 135 Query: 122 RYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPC 181 P ++ ++++D E G R S R R +LS+ L D Sbjct: 136 VAPGISLSVQSFDGRQPSDRVEYE---GVEIRLSVSRGRSVLSA------SRRLLDDQWM 186 Query: 182 VWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQS 241 V +RKDHPA L+ +L H+ + + +D +L E G R + +P + Sbjct: 187 VLMRKDHPAAASPLTLEKYLEQGHLKVT--GVGSSIVDELLAERGLARRVMFQVPTWLGM 244 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 + + D L+A P + ++ L VA P+P E L + +WH RN H+ Sbjct: 245 VPVIESTD--LVAAMPAHW-MHSVLSGSNCVARPMPLPE-----LALSIDAVWHPRNDHD 296 Query: 302 PKIVWLRETIKNLYAS 317 W RE I ++ Sbjct: 297 AGHKWFRELIHQIFQE 312 >UniRef50_B6RAE8 Transcriptional Regulator, LysR family n=1 Tax=Pseudovibrio sp. JE062 RepID=B6RAE8_9RHOB Length = 307 Score = 269 bits (690), Expect = 8e-71, Method: Composition-based stats. Identities = 71/319 (22%), Positives = 131/319 (41%), Gaps = 16/319 (5%) Query: 1 MKK-SITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSP 59 M++ ++ +DLNLL+ L+ L++ R V+ AA +++++ AVS++L +LR +DPL V Sbjct: 1 MRQVNLRGVDLNLLVILEKLLETRHVSLAATQLHMSQPAVSRALQRLRDLLNDPLLVRIA 60 Query: 60 LGLSPTPLMVSMEQNLAEWMQMSNLLLD-KPHHQTPRGLKFELAAESPLMMIMLNALSKQ 118 T +++ L + ++ + + + L K+ Sbjct: 61 GDYELTERAAEIQRLLPSVLATIQDVIAKPEFDPATAQETIRFSGPELEVNLYGPPLLKR 120 Query: 119 IYQRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSD 178 + Q P ++L++ + + + GE SG+E + + + L Sbjct: 121 MKQEAPGMKLELKSNIRNQFEPLENGEAHFVLSGQEPSAATSQ--------LHRISLGRF 172 Query: 179 VPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEF 238 + KDHP + +L+ +L HIS+ S +D L +GR+R +A+ + F Sbjct: 173 SYVCLMSKDHPLAGKPISLNDYLAQDHISVMITGSGQSIIDEKLAAMGRKRNVAVKIGSF 232 Query: 239 EQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRN 298 ++ Q D L L P +A P+P K F L WH+ Sbjct: 233 FAAMHFCGQTDLLFL--VPSIFDK-KIYEGHNTIASPVP---DFLKDHHQEFFLYWHECY 286 Query: 299 SHNPKIVWLRETIKNLYAS 317 H+P I W R +K Sbjct: 287 HHDPMIQWTRTLMKETTRQ 305 >UniRef50_A4GJC2 Transcriptional regulator LysR family protein n=1 Tax=uncultured marine bacterium EB0_49D07 RepID=A4GJC2_9BACT Length = 303 Score = 269 bits (689), Expect = 8e-71, Method: Composition-based stats. Identities = 68/321 (21%), Positives = 133/321 (41%), Gaps = 26/321 (8%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 I++ DLNL + + + E S+TKAA+ + +T AVS +L++LR FDD LFV + G+ Sbjct: 1 MKISSFDLNLFVIMNSIYTEGSLTKAAEVVGITQPAVSNALSRLREKFDDELFVRTGSGM 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTP--RGLKFELAAESPLMMIMLNALSKQIY 120 PT ++ Q++ +Q+ +++P P F ++ +L L +I Sbjct: 61 VPTQKTENIIQDIQNALQLMQKSVNEPDEFNPKTSERTFRISLGDINEGRILAILMSKIG 120 Query: 121 QRYPQATIKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 + P I+ D + A+ E+ + + +FSD Sbjct: 121 KSAPHVKIESYYSARDQVPHALATNELSFAVDPFIPNSKDTN----------SMKVFSDK 170 Query: 180 PCVWLRKDHPALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEF 238 V R +H + NL+ L+ +I+I + ++ +Q++ + +A+ + Sbjct: 171 FVVAHRANHDVSKIENLNLEEMLKLKYINISNRKRGASVVEMEMQKMQLQPEMALRAQHY 230 Query: 239 EQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRN 298 + + D LL + + + H L V LP +Q L+WH + Sbjct: 231 LVTPEIVRSSDLCLLC-----AETFAKKHGLSYVELPFKVPALEQ-------YLIWHNSD 278 Query: 299 SHNPKIVWLRETIKNLYASMA 319 ++ +W+R I + + Sbjct: 279 DNDGSHIWMRNLIAESFKEVG 299 >UniRef50_B9B1S8 Transcriptional regulator, LysR family n=1 Tax=Burkholderia multivorans CGD1 RepID=B9B1S8_9BURK Length = 319 Score = 269 bits (689), Expect = 9e-71, Method: Composition-based stats. Identities = 76/317 (23%), Positives = 134/317 (42%), Gaps = 22/317 (6%) Query: 6 TTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPT 65 LDLNLL Q +++ERS+TKA +R+ ++ AVS SL +LR FDDPLFV + G+ PT Sbjct: 18 DHLDLNLLRVFQAIVEERSLTKAGERLALSQPAVSYSLGRLRTLFDDPLFVRTRAGMQPT 77 Query: 66 PLMVSMEQNLAEWMQMSNLLLDKPHHQTPR--GLKFELAAESPLMMIMLNALSKQIYQRY 123 P+ + + + + + M + L P F L+ M L A+ + + +R Sbjct: 78 PVALELAGIVGKALDMVRVALRYAERFDPATSTRTFRLSLSDAGEMAYLPAICRALRERA 137 Query: 124 PQATIKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCV 182 P+ T+ ++ +++ +A+ +D L L +++LF + Sbjct: 138 PRVTLSVQPMPVEAIEEALRASRLDFAIGN----------LPELMPRTRHQLLFEETYVC 187 Query: 183 WL-RKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQS 241 R+ T L+ F+R H+++ + ALD+ L+ G R +A+ +P F Sbjct: 188 MTGRRRGLPSGTTLTLEQFVRAAHVNVKSVEHSHHALDDALRAQGVGRNVALEVPHFVAL 247 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 + D R Q N+ + L P T+ WH+ + Sbjct: 248 PGVLQVTDLYA-TLPKRLAQILNRDNAFRLY-------ALPVPLPPAPVTMHWHEHFHED 299 Query: 302 PKIVWLRETIKNLYASM 318 I W+R + + Sbjct: 300 EGITWMRALLAEIVERF 316 >UniRef50_A5WDE8 Transcriptional regulator, LysR family n=1 Tax=Psychrobacter sp. PRwf-1 RepID=A5WDE8_PSYWF Length = 302 Score = 269 bits (688), Expect = 1e-70, Method: Composition-based stats. Identities = 80/314 (25%), Positives = 137/314 (43%), Gaps = 21/314 (6%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 + +D+ LLL Q + Q+ +++KAA+++++ A S L KLR FDDPLFV + P Sbjct: 1 MFDIDVRLLLLFQAIYQQNTISKAAQKLDIGQPAASLGLNKLRQHFDDPLFVRVGNQMQP 60 Query: 65 TPLMVSMEQNLAEWMQMSNLLLDKPHHQTP--RGLKFELAAESPLMMIMLNALSKQIYQR 122 T ++ + +Q + D HH P +F ++ MI++ L K + Q Sbjct: 61 TQTAQNLFPLVNNALQHIRAVNDYTHHFEPKNSSRRFHISMTDISHMIIVPKLIKYLKQH 120 Query: 123 YPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCV 182 P + + + D+ ++ GE+D+ + L + F V Sbjct: 121 APHTKLDISAINSDTPSRMSSGEIDLAIGY----------IPHLEAGFFQQTFFEQHYSV 170 Query: 183 WLRKDHPALHQ-TWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQS 241 +R+DHP L Q T L+ + + H + + + L++ L+ +R IA++LP + Sbjct: 171 VVRQDHPRLTQNTLTLEAYQQEQHADVISSGTGHYLLEDHLRRRHIKRHIAITLPTYLGV 230 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 + Q D L+AT P L LPLP D + + WH+R N Sbjct: 231 GLIIQQTD--LVATLPDKLAKLLLQEN-RLHTLPLPLDIPKYQ-----VKQHWHERMHAN 282 Query: 302 PKIVWLRETIKNLY 315 P WLR+ L+ Sbjct: 283 PDNQWLRQVCYALF 296 >UniRef50_D0LUZ7 Transcriptional regulator, LysR family n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LUZ7_HALO1 Length = 306 Score = 268 bits (687), Expect = 2e-70, Method: Composition-based stats. Identities = 67/318 (21%), Positives = 131/318 (41%), Gaps = 22/318 (6%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 I +D NLL+ L L++E SVT+AA R+ +T SA+S +L +LR DPL V + + Sbjct: 1 MYIYGIDANLLVSLDALLREASVTRAAHRVGITQSAMSHALGRLRDHLGDPLLVRAGRNM 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPR--GLKFELAAESPLMMIMLNALSKQIY 120 T S+ ++ ++ + + P F L A +++ + + + Sbjct: 61 VLTAKAESLAPRVSVLVEEMSRVFAPDEEFEPAALRRGFALRATDHAQFVLMPEVDRLLR 120 Query: 121 QRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 P + + ++ + + + D+ S P I + L +D Sbjct: 121 AEAPGVDLVVTALSGGAVAPLRQAQSDLTLGT----------FSDHPSDIHSQALLTDRF 170 Query: 181 CVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQ 240 +R DHPA+ + + + HI + + +D VL ELG R I+ +P Sbjct: 171 VCLVRGDHPAIARGLGVAQYAAMTHIHV--GPAQLGVVDRVLGELGIARRISRVVPHVLV 228 Query: 241 SLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 + + A D + + + R Q ++ ++ P+P ++ WH+R+ Sbjct: 229 APLLIADSDAV-VTMSERLAQRALPGAEVAMLEPPVPLP-------PCTLSMAWHERHDA 280 Query: 301 NPKIVWLRETIKNLYASM 318 +P WLR+ + + + Sbjct: 281 DPAHRWLRDAVLRAASHL 298 >UniRef50_Q1LD16 Transcriptional regulator, LysR family n=8 Tax=Proteobacteria RepID=Q1LD16_RALME Length = 315 Score = 268 bits (685), Expect = 2e-70, Method: Composition-based stats. Identities = 74/322 (22%), Positives = 128/322 (39%), Gaps = 27/322 (8%) Query: 4 SITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVN--SPLG 61 +DLNLL+ L L+ ER+VT A+R+ +T AVS LA+LR FDDPL + + G Sbjct: 11 DFKGVDLNLLVTLDALLDERNVTHTAERLGLTQPAVSAQLARLRRIFDDPLLIPADTGRG 70 Query: 62 LSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTP--RGLKFELAAESPLMMIMLNALSKQI 119 + + +++ + L ++ ++ + P +F +AA + +L +++ Sbjct: 71 MIASARALALLEPLHVALKDLESVVHRRPEFDPFVDTRQFVIAASDNATSTLGMSLLERL 130 Query: 120 YQRY-PQATIKLRN-WDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFS 177 + + + + GEVD+ +P + L Sbjct: 131 SIVAGTGVRVAFVHGRQAEIAAQLESGEVDLLIGSE----------RMVPPTMRARKLLD 180 Query: 178 DVPCVWLRKDHPALHQTWNLDTFLRYPHISIC-WEQSDTWALDNVLQELGRERTIAMSLP 236 + + RK HP + LD + + H+ + S +D LQ LGR R +A+S+ Sbjct: 181 ETFVMAQRKSHPRGARRLTLDMYCKLRHVLVSTSGGSFFGFVDEQLQLLGRSRDVAVSVQ 240 Query: 237 EFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHK 296 F + + D + R Y L ALP + WH Sbjct: 241 AFTVVPDLLRRSDYVC-TMPARLAARYADW--LDAFALPFDVP-------GFSLSAAWHP 290 Query: 297 RNSHNPKIVWLRETIKNLYASM 318 RN +P I WLR T+ + + Sbjct: 291 RNHADPAIAWLRSTLAEVAGQL 312 >UniRef50_D0FZR1 LysR-type transcriptional regulator n=2 Tax=Rhodococcus RepID=D0FZR1_9NOCA Length = 311 Score = 268 bits (685), Expect = 2e-70, Method: Composition-based stats. Identities = 81/321 (25%), Positives = 134/321 (41%), Gaps = 23/321 (7%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 K + ++DLNLL+ L L+ RSVT+AA+R+N++ SA+S SL++LR FDDPL V + L Sbjct: 2 KDLRSVDLNLLVDLDALLSMRSVTEAARRLNLSQSAMSGSLSRLRRLFDDPLMVRNGRVL 61 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPR--GLKFELAAESPLMMIMLNALSKQIY 120 TP ++ + E + + + + PR F ++A ++L L + + Sbjct: 62 VLTPRAEALIPPVKEILHQIDGVFAESDDFDPRTTTRSFSISASDYATAVVLAPLLRGLA 121 Query: 121 QRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 P T+ + D + D+ RE S + LFSD Sbjct: 122 DDAPNVTVNVLPRSPDVPAVLRLDSADLVIEPREMMGDSP---------LPGVSLFSDRW 172 Query: 181 CVWLRKD-H-PALHQTWNLDTFLRYPHISICWEQSDT-WALDNVLQELGRERTIAMSLPE 237 L H PA+ D +L+ PH+ Q D L LG R I +++ Sbjct: 173 VCMLDGSMHEPAVLARLERDHYLQLPHLVYSIGQDRQLNYADRHLASLGVRRRIELTVES 232 Query: 238 FEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKR 297 F + + L++ L L LV P+P + + W+ R Sbjct: 233 FLMAPLLIRGTS--LVSLVLERAASMLPLDGLRLVDPPIPVP-------GITDAMYWNPR 283 Query: 298 NSHNPKIVWLRETIKNLYASM 318 +S +P WLR+ + + A + Sbjct: 284 HSEDPGHRWLRQRLADTAARL 304 >UniRef50_C2LG43 LysR-family transcriptional regulator n=4 Tax=Enterobacteriaceae RepID=C2LG43_PROMI Length = 323 Score = 268 bits (685), Expect = 3e-70, Method: Composition-based stats. Identities = 157/316 (49%), Positives = 224/316 (70%) Query: 2 KKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLG 61 K + +DLNLL+ Q+L+QERSVT AAK ++++PSAVSK+LAKLR WFDDPLF+ SP G Sbjct: 3 NKPLHRIDLNLLVIFQILLQERSVTLAAKWLSISPSAVSKALAKLRIWFDDPLFIRSPQG 62 Query: 62 LSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQ 121 L PTPL +S+E +L++++ +S+ + +K + + P GLKF L E+PL +ML +L +QI Sbjct: 63 LIPTPLSLSIEDSLSDFINISHHIANKRNTEVPVGLKFNLVLETPLHQVMLPSLPQQILS 122 Query: 122 RYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPC 181 YP++T++++NW+Y+SL I GEVDIG GRE + RS+ELL LP IDYE+LF D+P Sbjct: 123 HYPKSTLQIKNWEYNSLSNIIDGEVDIGLVGREYYSRSKELLELLPDVIDYEILFDDIPL 182 Query: 182 VWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQS 241 V+L K+HP + W+L+ FL + +S +++ WALDN+L+E+ + R IA++ FEQS Sbjct: 183 VYLHKNHPLMKMKWDLNNFLSFSQVSTEYDKQSHWALDNILKEMNKSRQIAITYTSFEQS 242 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 LFM +QPD+ L+ AP YC+YY + H +V LP+P +L +PF LLWHKRNSHN Sbjct: 243 LFMISQPDHQLITCAPGYCRYYVKTHFPDIVTLPIPLPPVFLDQLHLPFVLLWHKRNSHN 302 Query: 302 PKIVWLRETIKNLYAS 317 KI+WLR TI+ Sbjct: 303 TKIIWLRNTIRKSINQ 318 >UniRef50_D0RY94 Transcriptional regulator n=4 Tax=Acinetobacter RepID=D0RY94_ACICA Length = 311 Score = 268 bits (685), Expect = 3e-70, Method: Composition-based stats. Identities = 75/325 (23%), Positives = 147/325 (45%), Gaps = 24/325 (7%) Query: 1 MKKS---ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVN 57 M + + +DLNL + +E+++T+A++++ ++ AVS +LA+LR F+DPLF+ Sbjct: 4 MNNNVASLARIDLNLFRVFVTIYKEKNLTRASEQLFLSQPAVSHALARLRDHFNDPLFIR 63 Query: 58 SPLGLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNAL 115 G+ P+PL + + + +Q+ + + + P +A I L ++ Sbjct: 64 DGHGVVPSPLAKRLWPKIEQSLQLMHQAIQSTYDFVPARDLKHLTIAMNDEYEGIFLPSI 123 Query: 116 SKQIYQRYPQATIKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEV 174 + + Q P + D +L ++ G++D ++ S+ +I YE Sbjct: 124 IQHLTQFNPNLQLNSVRIDRKNLRHELSTGKIDFAI----------DVQHSVEDSIGYEC 173 Query: 175 LFSDVPCVWLRKDHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAM 233 D V RK HP L T + +L HI++ + D L + G +RTI+ Sbjct: 174 CTKDQFVVISRKQHPLLSSTDLTKEIYLDAKHITVSSRPTGRVFEDFFLSKQGIKRTISF 233 Query: 234 SLPEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLL 293 ++E ++ + Q D+LL T P+ Y + + + PLP D + + L Sbjct: 234 RCQQYETAIRLITQTDHLL--TIPQCQIAYFKDNYPQIKVHPLPIDIAGYQ-----MNLY 286 Query: 294 WHKRNSHNPKIVWLRETIKNLYASM 318 W ++ SH +IVW + + + ++ Sbjct: 287 WDQQKSHEHQIVWCKAQLLQIMNNL 311 >UniRef50_Q5LN55 Transcriptional regulator, LysR family n=4 Tax=Rhodobacterales RepID=Q5LN55_SILPO Length = 331 Score = 267 bits (684), Expect = 3e-70, Method: Composition-based stats. Identities = 78/326 (23%), Positives = 126/326 (38%), Gaps = 28/326 (8%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 + T DLNLL L L+ RS T+A +++ ++ AVS +L++LR DPLF+ L Sbjct: 1 MNFRTFDLNLLRVLDALLSTRSTTRAGQQLGMSQPAVSAALSRLRHALGDPLFIRQGRQL 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTP--RGLKFELAAESPLMMIMLNALSKQIY 120 PT + L + + + LL P L+ +++ L++ + Sbjct: 61 VPTDYAGGLHAPLRDLLGQTEALLAGQPDFDPGAATDSLTLSGSDFYAELLMPRLARHLS 120 Query: 121 QRYPQATIKLRNWDYDS-LDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 P ++L + D+ + ++ + VD+ + P ++ L S Sbjct: 121 HVAPGMRVQLVDLVPDNYVQSVGQSAVDMAILPA----------TPTPDWVEERRLHSSH 170 Query: 180 PCVWLRKDHPALHQT-------WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIA 232 R DHP + LD F H E D L +GR R + Sbjct: 171 FLAVARADHPEIASAAIAPGAVLPLDLFCSLQHALFSPEGKLHGLGDAALARIGRARQVT 230 Query: 233 MSLPEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTL 292 M+LP F L +Q D + L + + L L P+P V + Sbjct: 231 MTLPVFSGVLNAVSQSDLIAL-IPHQLAESVAPRLGLSLYHPPIPV-------GPVEIMM 282 Query: 293 LWHKRNSHNPKIVWLRETIKNLYASM 318 +WHKR S P WLR+ I L A + Sbjct: 283 VWHKRASTAPAHRWLRDQIAMLMAEL 308 >UniRef50_A4JED2 Transcriptional regulator, LysR family n=9 Tax=Proteobacteria RepID=A4JED2_BURVG Length = 308 Score = 267 bits (683), Expect = 4e-70, Method: Composition-based stats. Identities = 71/318 (22%), Positives = 126/318 (39%), Gaps = 20/318 (6%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 LDLNLL+ L L+ E+++++AA++I+++ SA S +LA+LR +FDD L V + Sbjct: 1 MRFNKLDLNLLVALDALLSEQNISRAAEKIHLSQSATSNALARLREYFDDELLVQVGRKM 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQIY 120 PTP +++ + + + + + P F L M ++ L + Y Sbjct: 61 EPTPRAEALKDAVRDILVRVDATVTAQPEFVPAQACRLFRLFVSDYTMTTLIPHLFRLAY 120 Query: 121 QRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 + P LR + RGE D+ +E EVL + Sbjct: 121 AQAPGIGFDLRPQVAYPHRVLERGEADLLIIPKEYC----------STEHPAEVLLEETF 170 Query: 181 CVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQ 240 C L + P + ++ HI + + T +Q LG R + S F Sbjct: 171 CCVLWEHSPLAKGELTKERYMGAGHIVVQVGEGQTALEAWFMQRLGVVRRVEASTYSFLS 230 Query: 241 SLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 + + + R + + L L +PL +Q ++ WHK + Sbjct: 231 PAHLLVGTNRIA-TMHRRLAEAAARDLPLVLRDVPLTVPTMEQ-------SVQWHKHRTS 282 Query: 301 NPKIVWLRETIKNLYASM 318 + ++WLR +K A+M Sbjct: 283 DQGLMWLRALLKEAVAAM 300 >UniRef50_Q687Z9 LysR-type activator n=1 Tax=Sphingopyxis macrogoltabida RepID=Q687Z9_9SPHN Length = 318 Score = 266 bits (682), Expect = 5e-70, Method: Composition-based stats. Identities = 63/307 (20%), Positives = 122/307 (39%), Gaps = 22/307 (7%) Query: 14 LCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSMEQ 73 +M +R V+ AA+ + +T VS +L +LR DD LF +P G+ PT + + + Sbjct: 26 RIFHRMMVDRKVSAAAEALGITQPGVSNALKRLRDITDDELFTRAPGGMEPTAFAIQIAE 85 Query: 74 NLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQIYQRYPQATI-KL 130 ++ + M + +P P F L +L + + + P + + Sbjct: 86 PISYALAMVDAAFTQPTDFKPASDRRLFRLGLTDIGEAYLLPKILARTAEIAPHVSFTTI 145 Query: 131 RNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPA 190 R + + + G +D+ ++ ++ + L + + +RKDHP Sbjct: 146 RPPKSEIREEMEVGSLDLAI----------DVFPNMKGNFVHRRLLKEKHVICMRKDHPL 195 Query: 191 L-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQPD 249 W + ++ H+ + + + +D +L G R I + LP F + + Sbjct: 196 ANKAEWTMADYIAQEHVVVIAQGTGHGDIDALLARKGISRNIRLMLPHFLSLGPVMHATN 255 Query: 250 NLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWLRE 309 L+AT P + L++LP P V + WH+R +P VWLR Sbjct: 256 --LVATLPEDAALLLE-EPYELISLPFP-----GILPIVHVDVFWHRRLHRDPANVWLRN 307 Query: 310 TIKNLYA 316 + L++ Sbjct: 308 LVYELFS 314 >UniRef50_A6FY23 Transcriptional regulator, LysR family protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6FY23_9DELT Length = 339 Score = 266 bits (682), Expect = 6e-70, Method: Composition-based stats. Identities = 67/303 (22%), Positives = 124/303 (40%), Gaps = 21/303 (6%) Query: 21 QERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSMEQNLAEWMQ 80 Q SVT AA+R+ ++ AVS +LA+LR F DPL V + G+ TP + + + + Sbjct: 21 QTSSVTGAARRLGLSTPAVSHALARLRERFGDPLLVRAGRGMVLTPRAEQLRPRVRDALS 80 Query: 81 MSNLLLDKPHHQTPR--GLKFELAAESPLMMIMLNALSKQIYQRYPQATIKLRNWDYDSL 138 ++ L+ + P P F L+ ++ + ++ P +++ D Sbjct: 81 LATLVFEDPGAFEPASMERSFTLSMTDYVLRVFGGPFEARVRAAAPGVDLRVIVNAVDDA 140 Query: 139 DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPAL---HQTW 195 + + G+ D+ + +LP + + S+ +R+ HP L + Sbjct: 141 ERLRAGDTDLVVG----------IYGALPPELRTRAIISERLVCVVREAHPVLAPTKRRL 190 Query: 196 NLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQPDNLLLAT 255 L F+ H+ I +D+ L ELG R +A ++P F+ +L M A D LL Sbjct: 191 TLRQFVTLEHVQIAPRGQPGGYVDDRLAELGHARRVARAVPFFQLALEMTASSDYLL-TV 249 Query: 256 APRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWLRETIKNLY 315 + R + L ++ P +++WH R + WLRE + Sbjct: 250 SERIARQLGPELGLRVLEPPSEL-----GLEPYALSMVWHPRFDADAGHRWLREQLVEST 304 Query: 316 ASM 318 ++ Sbjct: 305 QAL 307 >UniRef50_Q1R0T8 Transcriptional regulator, LysR family n=9 Tax=Gammaproteobacteria RepID=Q1R0T8_CHRSD Length = 308 Score = 266 bits (682), Expect = 6e-70, Method: Composition-based stats. Identities = 66/316 (20%), Positives = 123/316 (38%), Gaps = 22/316 (6%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 + +DLNL+ L + SVT AA ++NVT +VS SL++LR FDDPLF + G++P Sbjct: 1 MRPIDLNLVRTFVTLYESGSVTLAAHKLNVTQPSVSYSLSRLRELFDDPLFSRTRDGMAP 60 Query: 65 TPLMVSMEQNLAEWMQMSNLLLDKPHHQTP--RGLKFELAAESPLMMIMLNALSKQIYQR 122 T + + + + + L H P +F LA +L + + + Sbjct: 61 TFCAMRLYTSFRQALTQIEQTLSDAQHFDPEQSQRRFRLALTDLGETTLLAPILRHMRDL 120 Query: 123 YPQATIKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPC 181 P +++ + D + VD R+ ++ + + Sbjct: 121 APGVELEVVPLEIDKVVSWFDNKSVDAVICSRDIQA----------PSLGRRPIIEERYV 170 Query: 182 VWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQS 241 L + HP + QT +++ F R H+ + + +++VL+E R +++ +P F Sbjct: 171 GLLGRRHPRIGQTLSMEAFSREDHVQVSPT-TGHGLVEDVLKERDITRKVSVVVPHFSAL 229 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 + L + + + Q L V LP V L W ++ + Sbjct: 230 PRLLESTSLLAI-LPEQIAGLFTQQADLKQVELPFDIP-------PVEVALYWSRQVDDS 281 Query: 302 PKIVWLRETIKNLYAS 317 W R T+ + Sbjct: 282 AAQEWFRRTLIEATSR 297 >UniRef50_B0C4T0 Transcriptional regulator, LysR family n=1 Tax=Acaryochloris marina MBIC11017 RepID=B0C4T0_ACAM1 Length = 307 Score = 266 bits (681), Expect = 7e-70, Method: Composition-based stats. Identities = 64/309 (20%), Positives = 130/309 (42%), Gaps = 24/309 (7%) Query: 15 CLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSP-LGLSPTPLMVSMEQ 73 +L+QE SVT+AA+++N++ SA+S +L +LRA DP+ + + + TP + + Sbjct: 18 AFDILVQEASVTQAAEKLNMSQSAMSHALKRLRAVLKDPILIRTSQRQMEVTPYALEISP 77 Query: 74 NLAEWMQMSNLLLDKPHHQTPRGLK--FELAAESPLMMIMLNALSKQIYQRYPQATIKLR 131 + + + L P + F +A + + L +Q+ Q+ P I+++ Sbjct: 78 QVRQILAEIQETLLAKDVFNPATAQEDFRIATNDYVEATLSANLLQQLTQQAPGIQIRVK 137 Query: 132 NWDYDS-LDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPA 190 + D+ L A+ +D+ R E L+ + L+ D P Sbjct: 138 GLNKDAVLAALDDNSIDLFIGAGLDLKR----------WHVQESLYQEEFVCVLQSDCPL 187 Query: 191 LHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQPDN 250 +L+ ++ HI + ++ D +L++ + R + S P F F+ A D Sbjct: 188 --TELSLEQYVERTHILVSFQDDFRGIGDLILEQQQQSRQVVWSTPHFMVVPFLLANSDC 245 Query: 251 LLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWLRET 310 + L R + + L L+ P+ +++WH+R+++ P+ WLR+ Sbjct: 246 VAL-LPKRMAERCAKEMGLKLLPPPI-------DVTRFTVSMIWHQRHNNRPQHQWLRKQ 297 Query: 311 IKNLYASMA 319 +A Sbjct: 298 FLIAAKQLA 306 >UniRef50_A1UYR8 Transcriptional regulator, LysR family n=32 Tax=Burkholderia RepID=A1UYR8_BURMS Length = 313 Score = 266 bits (681), Expect = 7e-70, Method: Composition-based stats. Identities = 75/319 (23%), Positives = 138/319 (43%), Gaps = 22/319 (6%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 ++ ++DLNLL+ L L+ ER VT+A +RI +T AVS +L +LR F D + + +PLG+ Sbjct: 1 MNLRSIDLNLLVILDALLAERQVTRAGQRIGLTQPAVSNALGRLRYVFKDEILMRTPLGM 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQT--PRGLKFELAAESPLMMIMLNALSKQIY 120 TP ++ + + +Q L + +F L +++ L + I Sbjct: 61 ELTPRAKALACPIRQILQQIEELFVPENQFDSFTSDRRFTLRMSDLTELLLPPPLLRNIR 120 Query: 121 QRYPQATIKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 P + + + + D +++A+ G +D+ H P AI +VLF D Sbjct: 121 GTAPHIRMNVMHLNADKTVEALDSGRLDMAVCAGLDH----------PDAISSQVLFQDR 170 Query: 180 PCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFE 239 L + HP ++ L+ F +++ D+ +D +L ++ R IA ++P + Sbjct: 171 LVCVLSRRHPDANRPLTLERFAALDFLNVSINPVDSSLIDTMLADMRFTRRIAFNVPHWL 230 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 M L +L + LPL + V +TL WH+R Sbjct: 231 VVPSMLDA--LPLAVIMSERHALSLGDSRLAIRELPLDLE-------PVTWTLYWHRRYD 281 Query: 300 HNPKIVWLRETIKNLYASM 318 ++ WLR I ++ ++ Sbjct: 282 NSVAHEWLRNCITDVVDAI 300 >UniRef50_Q2KYC5 LysR-family transcriptional regulator n=9 Tax=Burkholderiales RepID=Q2KYC5_BORA1 Length = 306 Score = 266 bits (681), Expect = 7e-70, Method: Composition-based stats. Identities = 72/319 (22%), Positives = 123/319 (38%), Gaps = 22/319 (6%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 ++ LDLNLL+ Q L++ER+++ A+R++++ AVS +L +LR F D LFV + G+ Sbjct: 8 DALRKLDLNLLVVFQHLLEERNISAVARRLDLSQPAVSNALRRLRLAFGDELFVRTAQGM 67 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQIY 120 PTPL M ++E + + + L D P + +A + + L + Sbjct: 68 LPTPLAEGMGGQVSEALSLLSHLADAAQPFDPATSQRRLRIAMSDAGEIHFMPTLMELCA 127 Query: 121 QRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 + P I D + G VD+ L I +LF Sbjct: 128 RHVPGVRIDSLRCT-DLQRELDTGRVDLALGA----------FDGLGSGIVQRMLFRQGY 176 Query: 181 CVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQ 240 R HP + + F H+ + + ++ L+ G S+P F Sbjct: 177 ATLFRAGHPRAYAGMSARAFRAEQHLVVS-RAAPDGQINQALERAGVVLQEQFSVPHFAA 235 Query: 241 SLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 ++ + D LL + L ++ LP+ Q L WH+R Sbjct: 236 VPYIVSTTD-LLATVPEKLAASAAPRFGLQVLTLPIKVPLLQTN-------LYWHRRFQR 287 Query: 301 NPKIVWLRETIKNLYASMA 319 + WLR I + +A A Sbjct: 288 DGANQWLRGLIIDTFADRA 306 >UniRef50_C5CZA2 Transcriptional regulator, LysR family n=1 Tax=Variovorax paradoxus S110 RepID=C5CZA2_VARPS Length = 317 Score = 266 bits (681), Expect = 7e-70, Method: Composition-based stats. Identities = 72/321 (22%), Positives = 120/321 (37%), Gaps = 23/321 (7%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 +I ++DLNL L Q + RSVT A R+ +T SAVS +L ++R F+D LFV S G+ Sbjct: 1 MNINSIDLNLFLVFQAIYATRSVTLAGDRLGMTQSAVSNALKRMRERFNDALFVRSADGM 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTP--RGLKFELAAESPLMMIMLNALSKQIY 120 PTP+ + + E + +D+ P F +A ++M+ L Sbjct: 61 VPTPVAERLIAPIEEGIACLVQAVDQGRTFEPETSSRIFRIAVNDIGQLVMVPELISVAR 120 Query: 121 QRYPQATIKLRNWD-YDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 P + + ++ + G++D+ E ++ + + LF + Sbjct: 121 GIAPGVRFETVDVSVAEARQRMLHGQIDVALGSWE----------AMGPSFYQQRLFDET 170 Query: 180 PCVWLRKDHPA-LHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGR--ERTIAMSLP 236 V + K P + LD +L HI+ + + L L+ G R + ++ Sbjct: 171 FVVLMSKASPLGTRERIELDDYLAAEHIAYRPQGTTDSQLQQTLERAGALDRRRVVLTAA 230 Query: 237 EFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHK 296 + A LL A A L V P WH+ Sbjct: 231 HSLGLTSIVATSGLLLTAPARLAKAMVASRADLHSVDAPFEV-------RPFEIRQQWHE 283 Query: 297 RNSHNPKIVWLRETIKNLYAS 317 R + WLRE I L+ Sbjct: 284 RFHQDSGNRWLRELIFGLFHE 304 >UniRef50_Q7NT25 Probable transcription regulator protein n=1 Tax=Chromobacterium violaceum RepID=Q7NT25_CHRVO Length = 310 Score = 266 bits (680), Expect = 1e-69, Method: Composition-based stats. Identities = 70/310 (22%), Positives = 121/310 (39%), Gaps = 20/310 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 L+LNLL L+ L++ R++T++A R+ +T SA+S+ L +LRA F DPL + T Sbjct: 5 LNLNLLRSLEALLETRNLTRSAARLGLTQSAMSRHLVQLRAQFQDPLLLREGQRFVLTER 64 Query: 68 MVSMEQNLAEWMQMSNLLLDKP-HHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + L ++ L P + +F A L ML + ++ + P Sbjct: 65 AEELRLGLKAVLEQVEQLYQPPQFDPSACEREFSFAGSDYLAEYMLPDILDRVLPQAPGM 124 Query: 127 TIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRK 186 +K W D ++ G D+ + +P I + L D P + Sbjct: 125 RLKFIPWQAGRFDLLSDGAADLI----------STIADEVPDNIYGKSLGQDQPMCVMAD 174 Query: 187 DHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMA 245 +HP + D +L +PH + +D L G R I ++ P F +L + Sbjct: 175 NHPLHDKPALERDDYLAWPHARVSSASDKDGFVDIQLARNGLSRQIRIATPYFVSALSIV 234 Query: 246 AQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIV 305 ++ LLL + + + LP + LLWH R +P Sbjct: 235 SRS-QLLLTLPEHLAVRFQRQFPVRAKPLPF-------IDYTYRYWLLWHGRADKDPAHR 286 Query: 306 WLRETIKNLY 315 W R + ++ Sbjct: 287 WFRGHVFDVL 296 >UniRef50_A1WMY5 Transcriptional regulator, LysR family n=1 Tax=Verminephrobacter eiseniae EF01-2 RepID=A1WMY5_VEREI Length = 304 Score = 266 bits (680), Expect = 1e-69, Method: Composition-based stats. Identities = 77/317 (24%), Positives = 143/317 (45%), Gaps = 23/317 (7%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 + +DLNLL+ Q L++ER+V++AA+R+ ++ SAVS +L +LR F D L V P G+ Sbjct: 1 MGLRQIDLNLLVTFQALVEERNVSRAAERLALSQSAVSHALKRLRNTFQDELLVRGPRGM 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQIY 120 PTP V++ + + +D+ P + L+ + ++ + + Sbjct: 61 EPTPRAVTLAIAVKSGLATIETAVDEKRSFDPATCHSTYYLSVTEYVRPFIMAHMCAYVR 120 Query: 121 QRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 + P + + D + + + R +L + P ++ LF D Sbjct: 121 EAAPHVRLVFESPDEHQVGS--------AVAYEGLQIRLADLPVNGP--MESMRLFDDTF 170 Query: 181 CVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQ 240 V +R++HP Q L+ +L+ HI + + A+D L R + + +P + + Sbjct: 171 AVAMRREHPFAEQELTLEKYLQLAHIKVT--GVGSSAIDRALTARSLVRDVVVKMPNWLE 228 Query: 241 SLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 +L + D L+ P + +L + + PLP ++P WH RNS Sbjct: 229 ALEVVECTD--LVVAMPNHWTRLGRLPRC-CITRPLPLAL------QMPIDAAWHPRNSS 279 Query: 301 NPKIVWLRETIKNLYAS 317 +P VWLRET++ +A+ Sbjct: 280 DPAHVWLRETVRQAFAA 296 >UniRef50_Q0SCY7 Transcriptional regulator, LysR family protein n=3 Tax=Actinomycetales RepID=Q0SCY7_RHOSR Length = 331 Score = 266 bits (680), Expect = 1e-69, Method: Composition-based stats. Identities = 76/318 (23%), Positives = 131/318 (41%), Gaps = 22/318 (6%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 + +DLNL+ LL + RSVT+ A+ + +T +VS SL +LR F+D LF+ S GL+P Sbjct: 28 MADVDLNLIRTFVLLYETRSVTRTAELLFITQPSVSHSLRRLRRQFNDDLFIRSSDGLAP 87 Query: 65 TPLMVSMEQNLAEWMQMSNLLLDKPHHQT--PRGLKFELAAESPLMMIMLNALSKQIYQR 122 T L SM L + +++ + + H F + A + +L + + R Sbjct: 88 TVLAASMYPQLHQALEVIDETVSGVGHFDAETSDRTFRICATDLGEISLLPGVLAALETR 147 Query: 123 YPQATIKLRNWD-YDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPC 181 P +++ D + + + +G D + + LF + Sbjct: 148 APGCAVQVTPLDFASAAEELRQGRADAVICTPRIDA----------PDLRRDPLFREGYV 197 Query: 182 VWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQS 241 HP + LD FL HI + + D L +GR R IA+ +P F Sbjct: 198 GLCALGHPRIGVEPGLDDFLAERHIVVDA-AAGHVDADQALARMGRRRDIAVRVPHFAVL 256 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 + AQ +L + R + + + + ALP+ V +L +R + Sbjct: 257 PELVAQTRHLAVV-PSRVAELFTRSSPVRTFALPVEIP-------NVEVSLFTVRRALPS 308 Query: 302 PKIVWLRETIKNLYASMA 319 P + WLRE I ++ + A Sbjct: 309 PGVDWLRELIADVLQAPA 326 >UniRef50_C5CZY6 Transcriptional regulator, LysR family n=1 Tax=Variovorax paradoxus S110 RepID=C5CZY6_VARPS Length = 325 Score = 265 bits (679), Expect = 1e-69, Method: Composition-based stats. Identities = 76/325 (23%), Positives = 135/325 (41%), Gaps = 24/325 (7%) Query: 1 MKKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPL 60 M +S +D++LL L L+ ERSV++AA R+N T A+S +L +LR F DP+ V Sbjct: 1 MTRSQDLVDIHLLRVLAALVAERSVSRAAVRMNQTQPAISAALRRLRDAFGDPILVRERG 60 Query: 61 GLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTP--RGLKFELAAESPLMMIMLNALSKQ 118 G+ PT + + ++ E + + +L P P + F +A L + + + Sbjct: 61 GMVPTARALQLRESAREVLGEIDRMLAGPERFEPGASTMTFTIATPDYLAASFMAEVVAR 120 Query: 119 IYQRYPQATIKLRNWDY--DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLF 176 PQA + + D A+ +GE+DI P + +L Sbjct: 121 FRAEAPQARLLIHPLTPGYDYERALAQGELDIVIGNWPLP----------PERMHLSLLI 170 Query: 177 SDVPCVWLRKDHPALH-QTWNLDTFLRYPHISICW-EQSDTWALDNVLQELGRERTIAMS 234 D + +P L +L H+ +S +D+ L L + R + Sbjct: 171 EDELVCMMSPGNPLAAPGAMTLQRYLAAAHVVPTPFAKSHRAVVDSHLAGLRQTRDARVF 230 Query: 235 LPEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLW 294 +P + + ++ A+ D L+ TA + + + + + VA P F + F LW Sbjct: 231 VPYYAMAPYLVAESD-LVFTTARHFAEQFTRSLPVVSVAAPEGFPRMR-------FYQLW 282 Query: 295 HKRNSHNPKIVWLRETIKNLYASMA 319 H+R+ H WLR + + +A Sbjct: 283 HERSQHQGAHRWLRSLLSTVGGHLA 307 >UniRef50_A0KH33 Transcriptional regulator, LysR family n=2 Tax=Aeromonas RepID=A0KH33_AERHH Length = 313 Score = 265 bits (679), Expect = 1e-69, Method: Composition-based stats. Identities = 70/307 (22%), Positives = 130/307 (42%), Gaps = 19/307 (6%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 + +LNLL L++L++ R++++AA+ ++++ ++SK L +LR+ F D L V Sbjct: 1 MHKANLNLLPTLKVLLETRNISRAAELLHLSQPSISKQLGQLRSEFGDELLVREGQRWLL 60 Query: 65 TPLMVSMEQNLAEWMQMSNLLLDKP-HHQTPRGLKFELAAESPLMMIMLNALSKQIYQRY 123 TP ++ LA+ + L + P + F LA+ + +L + + + Sbjct: 61 TPRAEALAAQLADSLGALERLYEAPGFDPSRCERVFRLASSDYVAQHILPDICAALAREA 120 Query: 124 PQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVW 183 P A ++ WD L + + E+D+ + +P I D V Sbjct: 121 PLAALEYSLWDKRLLPQLWQSELDMV----------STITELVPDQIRGLHQGEDRLVVL 170 Query: 184 LRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 + HP ++ +LD +L +PH+ + ++ VL G R +P F+ ++ Sbjct: 171 MGSHHPLAGRSLSLDDYLAWPHLQVSGGGDKDSPVEQVLAPQGLSRRWFARVPFFQAAVE 230 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 + + D LL T + H L LP Q + LLWH+R+ +P Sbjct: 231 VLLRTDCLL-TTPAHIAWQLSCEHALHFCDLPFASRTQQ-------YHLLWHQRHHQDPA 282 Query: 304 IVWLRET 310 W RE Sbjct: 283 HKWFREL 289 >UniRef50_D1P5Q9 Transcriptional regulator, LysR family n=1 Tax=Providencia rustigianii DSM 4541 RepID=D1P5Q9_9ENTR Length = 305 Score = 265 bits (679), Expect = 1e-69, Method: Composition-based stats. Identities = 69/319 (21%), Positives = 141/319 (44%), Gaps = 22/319 (6%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 ++ LDLN L+ L +L++ER V++AA+ + + AVS +L +LR F DPL V Sbjct: 2 NNLRKLDLNQLVTLSVLLRERHVSRAAEALYKSQPAVSHALNQLRELFQDPLLVRRDGQY 61 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDK-PHHQTPRGLKFELAAESPLMMIMLNALSKQIYQ 121 T S+ L E + + L+ + + F +A ++ L + + Sbjct: 62 QLTSKAESLCIPLNEALNQLDDLIAQKQFNPLSCQRHFNIAMSDYGAALIAVKLVPYLRK 121 Query: 122 RYPQATIKLRNWDYDSLD-AITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 P +K+ + + + + G +D+ F + ++L ++ +++F+D Sbjct: 122 YAPDIDLKIWHCSREEMQNKLHEGSLDLAFG----------VFNTLDYSLRNQIVFTDKF 171 Query: 181 CVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQ 240 + +L ++ YPHI + + D +D+ LQ + ++R IA+++P ++ Sbjct: 172 VSIVDPQ-VCSQGKMDLIDWVSYPHILVSMKPFDANEIDHQLQLINQQRRIAVTVPYWQI 230 Query: 241 SLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 + + + L+ T + + + L PLP ++ F ++WH+R+ Sbjct: 231 APQLLMGTN--LILTLAQKAIPLSMSDKFTLFTPPLPLP-------DLVFQMIWHQRSDT 281 Query: 301 NPKIVWLRETIKNLYASMA 319 + + WLRETI L Sbjct: 282 DKAVYWLRETIVELLNEEG 300 >UniRef50_A5VEA0 Transcriptional regulator, LysR family n=1 Tax=Sphingomonas wittichii RW1 RepID=A5VEA0_SPHWW Length = 309 Score = 265 bits (678), Expect = 2e-69, Method: Composition-based stats. Identities = 63/318 (19%), Positives = 125/318 (39%), Gaps = 13/318 (4%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 + LDLNLL+ L L E++VT+AA+RIN++ +S +L KLR F DPL + Sbjct: 1 MHLRGLDLNLLIALDALFTEKNVTRAAERINISQPGMSAALQKLRWHFSDPLLERVGRRM 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQIY 120 T ++ + E + L DKP P F + A + I+ L +I Sbjct: 61 ELTVRGRALADPVREILIKVRDLTDKPEEFDPATARRVFRIGATTFCSDILAAPLLCRIE 120 Query: 121 QRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 + P +++ + D++ + G++D + L S ++D F+D Sbjct: 121 RIAPNISVQFEDLATDTVHRLVDGQLDFAITISARILSDEVNLDSSLSSLDL---FTDAF 177 Query: 181 CVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQ 240 + + + + D P+I + + + ++ ++ I LP F+ Sbjct: 178 VLVTSRQNSRVGDAVTFDQLCELPYIETRFGNVIAGISEQMWRQQPKQPQIRAWLPNFQL 237 Query: 241 SLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 +L + D + + Q + + + + +P+ + L WH+RN Sbjct: 238 TLDTVSHTDMVAIVPL-HLAQLHGDRYNVRTLPVPVEMPT-------IEERLFWHQRNDQ 289 Query: 301 NPKIVWLRETIKNLYASM 318 + W + ++ Sbjct: 290 DAGHSWFKGLLQETVQGF 307 >UniRef50_A6X639 Transcriptional regulator, LysR family n=1 Tax=Ochrobactrum anthropi ATCC 49188 RepID=A6X639_OCHA4 Length = 324 Score = 264 bits (677), Expect = 2e-69, Method: Composition-based stats. Identities = 80/335 (23%), Positives = 133/335 (39%), Gaps = 41/335 (12%) Query: 4 SITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLS 63 SI +DLNL+ LM+ER+VTKA +R+N+T SAVS +L KLR D LFV P G+ Sbjct: 3 SIHNIDLNLIRVFNALMEERNVTKAGERLNLTQSAVSHALGKLRYILSDELFVRGPQGMH 62 Query: 64 PTPLMVSMEQNLAEWMQMSNLLLDK-PHHQTPRGLKFELAAESPLMMIMLNALSKQIYQR 122 PTP + Q L + + L + F +A + + A+ +++ + Sbjct: 63 PTPRAEELSQPLRSALADISAALSPVQFDPATADMSFVVATSDFYIGTLFPAVMERLEKE 122 Query: 123 YPQATIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPC 181 P + LR ++ + ++ + RG + + +P E L S Sbjct: 123 APGIRLWLRLFNDLNLVEELDRGTLHLVVGA----------FGRIPSRFRRETLVSVDNV 172 Query: 182 VWLRKDHPALHQTWNLDTFLRYPHISICWEQS---------------------DTWALDN 220 +RKDHPA ++T YPHI + + L+ Sbjct: 173 WIMRKDHPASSGPLTIETLGHYPHIDVLLSGRAAMEAAGMQEQEGLERAFVTSNPPFLEG 232 Query: 221 VLQELGRERTIAMSLPEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDE 280 +L+E+G R I ++ + A + + L + Y + L L P P Sbjct: 233 LLREVGLSRRIGATVSLILAVPPLVAATNMIAL-LPRSVAETYKDTYGLVLHEAPYPLPA 291 Query: 281 SQQKKLEVPFTLLWHKRNSHNPKIVWLRETIKNLY 315 +Q +L H +P + WLR ++ Sbjct: 292 TQ-------INMLSHNTFGAHPAVAWLRSVLREAI 319 >UniRef50_B7RV99 Transcriptional regulator, LysR family protein n=1 Tax=marine gamma proteobacterium HTCC2148 RepID=B7RV99_9GAMM Length = 303 Score = 264 bits (677), Expect = 2e-69, Method: Composition-based stats. Identities = 72/318 (22%), Positives = 133/318 (41%), Gaps = 25/318 (7%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 + +DLNL + L +ERSVT+ A+ +++T AVS +L++LR FDD LFV SP G+ Sbjct: 1 MRLDKVDLNLFVVFDALYRERSVTRVAQALHLTQPAVSNALSRLRQSFDDQLFVRSPRGM 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTP--RGLKFELAAESPLMMIMLNALSKQIY 120 PTP+ ++ ++ + + + P + F L ++L L + Sbjct: 61 QPTPVAEAISVDVQKALGLLQKTTLSGQRFDPGSAEMTFRLGMSDVAQNMVLPGLHNALA 120 Query: 121 QRYPQATIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 Q P TI+ D ++ + G++D+ + + R L L S + Sbjct: 121 QLAPGVTIEAYYLDRASAVAQLKSGDLDLLLDAPQVNARELGQL----------HLGSLL 170 Query: 180 PCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFE 239 V + K HP ++D +L H+ + +D L +G R + + + ++ Sbjct: 171 YRVAMAKAHPLAQVDLDIDQYLAAKHVHVSARPRGRGQVDLALHAIGHRRKVVVRVQQYA 230 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 + + AQ D L A +L +V P + + L WH+ + Sbjct: 231 VAAAITAQSDLLWTAPGSVI-----DHPELHVVETPFQVE-------SLVLNLYWHRSAA 278 Query: 300 HNPKIVWLRETIKNLYAS 317 +P W+R+ + +A Sbjct: 279 EDPANAWMRKMLAQQFAE 296 >UniRef50_Q0K3U9 Transcriptional regulator, LysR-family n=2 Tax=Betaproteobacteria RepID=Q0K3U9_RALEH Length = 311 Score = 264 bits (676), Expect = 3e-69, Method: Composition-based stats. Identities = 64/319 (20%), Positives = 118/319 (36%), Gaps = 25/319 (7%) Query: 4 SITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLS 63 +DLNL++ L +L++ERSV++AA R+++ AVS +LA+LR FDDPL V + G+ Sbjct: 7 HFRGVDLNLMVTLTVLLRERSVSRAAARLHLGQPAVSGALARLREMFDDPLLVRTAHGME 66 Query: 64 PTPLMVSMEQNLAEWMQMSNLLLDKPHHQTP--RGLKFELAAESPLMMIMLNALSKQIYQ 121 PT + +E+ L + L + P F + + + + + + Sbjct: 67 PTERALELERRLLPALGEIEAALLQRRDFDPLTSDRTFVVGMPDWVELWLAPRILPSLST 126 Query: 122 RYPQATIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 P + + D + + R E+D+G R + Sbjct: 127 CAPGVRLAIVPTDPFRGTEMLERNEMDLGIGPFAKGAAWR----------RERAWQTMGF 176 Query: 181 CVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQ 240 Q +L +LR+PH+ + + + D L G+ R + S F Sbjct: 177 RCVYGAAPLDACQILSLQDYLRFPHVLVSYRGAFDSTADTWLATQGQARDVRYSSARFAS 236 Query: 241 SLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 + L + L + P+P + T +W + Sbjct: 237 VPAILKGT-AALATVPAVLADQWCATEGLRQLPCPVPMP-------DFTVTAVWSAARDN 288 Query: 301 NPKIVWLRETIKNLYASMA 319 + ++WL N +A +A Sbjct: 289 DAGLMWL----ANTFAGLA 303 >UniRef50_Q8XRG7 Probable transcriptional regulator transcription regulator protein n=1 Tax=Ralstonia solanacearum RepID=Q8XRG7_RALSO Length = 308 Score = 264 bits (675), Expect = 4e-69, Method: Composition-based stats. Identities = 68/315 (21%), Positives = 123/315 (39%), Gaps = 23/315 (7%) Query: 7 TLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTP 66 LDLNLL + + + R++T +R+ ++ AVS+ LA+LR + D LFV G+ PT Sbjct: 13 HLDLNLLELFESIWRTRNLTATGERLGLSQPAVSRGLARLRETYGDELFVRHRRGVEPTA 72 Query: 67 LMVSMEQNLAEWMQMSNLLLD-KPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQ 125 ++ + ++ + + ++ +F +A L L+ + PQ Sbjct: 73 FAQTLAEPVSAALAIVRRTIEKPTFSAAEDARRFRVALSDIGERYFLPRLAAWLADHAPQ 132 Query: 126 ATIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 +I + + L + GE+D+ L L + + LF + Sbjct: 133 VSIDTVSASREELLTGLASGEIDLAVGF----------LPGLGKQVHEKRLFQEKFVYIA 182 Query: 185 RKDHPALHQTWNLDTFLRYPHISICWEQSDT-WALDNVLQELGRERTIAMSLPEFEQSLF 243 R+DHP + PH+ + A++ VL +AM + F Sbjct: 183 RRDHPGIDGRLQASQLRALPHVVGSPHGTQHAAAVEKVLTGPRVRAVVAMRVGSFLSIGP 242 Query: 244 MAAQPDNLLLATAPR-YCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 + A D L+A P ++ L L+A P+ F +++WH+R +P Sbjct: 243 IVADSD--LVAVVPSNLAALVSEHVGLQLIAPPVRFP-------SFEVSMVWHRRFHGDP 293 Query: 303 KIVWLRETIKNLYAS 317 WLR L+ Sbjct: 294 GGAWLRGVFSQLFGE 308 >UniRef50_A0KIB7 Transcriptional regulator, LysR family n=2 Tax=Aeromonas RepID=A0KIB7_AERHH Length = 303 Score = 263 bits (674), Expect = 4e-69, Method: Composition-based stats. Identities = 69/307 (22%), Positives = 131/307 (42%), Gaps = 20/307 (6%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 ++ +DLNLL+ L+ L++ER+ TKAA+R+ ++ AVS++LA+LR +DDPL + +P G+ Sbjct: 1 MNLRGVDLNLLVVLKALLEERNTTKAAERLAMSQPAVSRALARLRLLYDDPLLIRTPQGM 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQIY 120 PT ++ L E + P P + A + + +M+ +L ++ Sbjct: 61 EPTARAEALLLPLREILHDIEQTFSPPEQLDPAQFEGVLRIGAHTYVEYVMMPSLLARLQ 120 Query: 121 QRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 Q+ P I + + D + G + + S ++ +P LF D Sbjct: 121 QQAPNLRIHMVPLNADYESQLDEGVISMVISKQD----------EVPGRFRRIPLFEDKL 170 Query: 181 CVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQ 240 + HP Q +++F + H+ + S+ +D++L G R + + F Sbjct: 171 ICAAHRSHPLQGQVLCIESFAQAQHLLVAPRGSEGGIVDDLLAAHGMTRHTPLIVQSFLA 230 Query: 241 SLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 + F+ LLL + R + L L +L+ H+R+ + Sbjct: 231 APFILPCA-PLLLTSPARVLRPLMPLLDLVEYETRFALPT-------FEVSLIRHRRDDN 282 Query: 301 NPKIVWL 307 N + W Sbjct: 283 NAMLNWF 289 >UniRef50_A2SDX3 Transcriptional regulator, LysR family n=6 Tax=Burkholderiales RepID=A2SDX3_METPP Length = 326 Score = 263 bits (674), Expect = 5e-69, Method: Composition-based stats. Identities = 83/325 (25%), Positives = 133/325 (40%), Gaps = 29/325 (8%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 ++L+L+ L ++ ERSV++AA R+ T AVS L +LRA DPL V S G++P Sbjct: 7 FDKIELHLVRVLHTVITERSVSRAALRLRTTQPAVSAQLKRLRALVGDPLLVRSGTGMAP 66 Query: 65 TPLMVSMEQNLAEWMQMSNLLLDK-----PHHQTPRGLKFELAAESPLMMIMLNALSKQI 119 T + + + + AE ++ + L F +AA L L AL ++ Sbjct: 67 TAVALQLLEPAAELLRNAERLFGSRAEALAFDPAHSETTFRVAASDYLDPQFLPALVTRL 126 Query: 120 YQRYPQATIKLRNWDY--DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFS 177 P +++ D + RGEVD+ P + L S Sbjct: 127 RAEAPGIRVEVLPLSAEFDYRKGLARGEVDLVIGNWLRP----------PAELHLGRLLS 176 Query: 178 DVPCVWLRKDHPALHQT--WNLDTFLRYPHISICW-EQSDTWALDNVLQELGRERTIAMS 234 D + +DHPA+ W + +L HI+ +D L LG R I + Sbjct: 177 DEIVCLVAEDHPAVKSPRSWTAERYLASEHIAPTPLHPGARGVIDEHLDALGLARDIVVR 236 Query: 235 LPEFEQSLFMAAQPDNLLLATAPRYCQYY-NQLHQLPLVALPLPFDESQQKKLEVPFTLL 293 P F M A L+L T +C Y QL L +V P+PF + + L Sbjct: 237 SPYFGLGPQMVAHS-RLVLTTGRLFCSRYVGQLPGLRIVRCPVPFPA-------LVYYQL 288 Query: 294 WHKRNSHNPKIVWLRETIKNLYASM 318 WH+ + + WLR ++++ + Sbjct: 289 WHELSHQSAAGRWLRGVMRDVARGL 313 >UniRef50_Q7MFJ9 Transcriptional regulator n=28 Tax=Vibrio RepID=Q7MFJ9_VIBVY Length = 314 Score = 263 bits (673), Expect = 6e-69, Method: Composition-based stats. Identities = 66/316 (20%), Positives = 130/316 (41%), Gaps = 20/316 (6%) Query: 4 SITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLS 63 ++ ++DLNLL L+ L+ + +++AA+ +N++ AVS++L +LR F DPL V Sbjct: 7 NLRSIDLNLLTILEKLLIHKHISQAAQALNMSQPAVSRALMRLREQFGDPLLVKVNREYR 66 Query: 64 PTPLMVSMEQNLAEWMQMSNL-LLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQR 122 T + + L + L+D F + A MM+++ L + QR Sbjct: 67 LTAKGEYLRRELESSLNTIRQMLVDDAFDPLQYAGVFTIGALDFEMMMIVPKLLARFQQR 126 Query: 123 YPQATIKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPC 181 P+ +++ ++ L D+ + P + + LF+D Sbjct: 127 APKLKLQIVPYNAYMPLHDYLEKVADLLLYSTD----------DSPTNVFKQRLFNDNYA 176 Query: 182 VWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQS 241 V + ++H +Q L+ + R H+ + +D+ L+ ++R + SLP F Sbjct: 177 VVMCQNHVLANQPMTLERYCRSRHVIVSGNGLGKTDIDHELKRRNQQREVVASLPHFSMV 236 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 + D L+ R + + +++ + LP + WH + N Sbjct: 237 PELLINTD-LIATLPRRLVSHLSHRYEITVAELPF-------YTADFQVEQFWHLIHHSN 288 Query: 302 PKIVWLRETIKNLYAS 317 P W+R+ IKN+ Sbjct: 289 PAHQWVRQEIKNMVDE 304 >UniRef50_C6BS61 Transcriptional regulator, LysR family n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6BS61_DESAD Length = 310 Score = 263 bits (673), Expect = 6e-69, Method: Composition-based stats. Identities = 81/320 (25%), Positives = 138/320 (43%), Gaps = 21/320 (6%) Query: 2 KKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLG 61 K + + LDLNLL+ L + ERS+T A ++ +T SAVS +L+KLR FDD LFV Sbjct: 3 KTNSSNLDLNLLVILDTIFTERSLTLAGNKLFMTQSAVSHALSKLRHHFDDRLFVRRGNI 62 Query: 62 LSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQI 119 + PTPL ++ QN+A ++ N L P F L L ++L + + I Sbjct: 63 MEPTPLCKTIHQNIAPSLKAINQSLADRGEFDPASSKRTFSLGLSDYLCKLLLPEILRLI 122 Query: 120 YQRYPQATIKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSD 178 R +I++ Y+ + + G++D+ + + E LF D Sbjct: 123 DSRALGISIRIMQTTYEKREEMLQSGKLDVFLG----------CPRNYGAGVLKEKLFED 172 Query: 179 VPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEF 238 +R DHP + N + ++ +S L++ L G +R I + L + Sbjct: 173 REVCVVRNDHPIKGEVMNEEEMAENEFAALSLSESGLGFLEDYLYRKGVQRKIKIVLQQE 232 Query: 239 EQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRN 298 + + + + A R + Y +L +V +PL E + WH N Sbjct: 233 TVIPSLVENSNLVG-SIAQRLAEMYAAKGRLRIVHMPLE-------NTEFEVSQHWHSLN 284 Query: 299 SHNPKIVWLRETIKNLYASM 318 ++P W+R IK + A++ Sbjct: 285 DNDPAQQWIRSVIKEVAATL 304 >UniRef50_Q1M9F6 Putative LysR-family transcriptional regulator n=1 Tax=Rhizobium leguminosarum bv. viciae 3841 RepID=Q1M9F6_RHIL3 Length = 317 Score = 263 bits (673), Expect = 6e-69, Method: Composition-based stats. Identities = 73/319 (22%), Positives = 134/319 (42%), Gaps = 21/319 (6%) Query: 2 KKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLG 61 + S+ +DLNLL +LM+ERSVT+AA R+ T SA+S SL +LR F D LF Sbjct: 3 EFSLNQIDLNLLRTFDVLMRERSVTRAADRLGRTQSAISHSLGRLRDVFKDDLFTREAGI 62 Query: 62 LSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQI 119 + PT + + +++ + + +D+ + P F + + L L + Sbjct: 63 MEPTARAKELAEVISQALHEIRVAVDRHLNFDPTTTSRNFRIGLSDYTAVTYLPELIENF 122 Query: 120 YQRYPQATIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSD 178 P A++ + + + D+L ++ EV+ G + L D Sbjct: 123 SMLAPNASLNVVHAREPDALGSLKNREVECAVLGNPKLDAE---------HFEVVELSRD 173 Query: 179 VPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEF 238 +PA+ +LD +L PH+ I + D LQ+LG R + ++P + Sbjct: 174 RMVCAGWTGNPAMAD-MSLDRYLASPHLQISADGIAAGVADITLQKLGLHRKVVATIPHY 232 Query: 239 EQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRN 298 + ++ + L+ A ++ + +V PL +V +L++ + N Sbjct: 233 LVAPWVIKGTE-LISAFGDGVLLALSEESETAIVPPPLELP-------DVTISLIFDRSN 284 Query: 299 SHNPKIVWLRETIKNLYAS 317 +P VW R IK++ Sbjct: 285 ELDPGHVWFRNLIKDVSDR 303 >UniRef50_B5XYZ1 Transcriptional regulator, LysR family n=5 Tax=Klebsiella RepID=B5XYZ1_KLEP3 Length = 308 Score = 263 bits (672), Expect = 7e-69, Method: Composition-based stats. Identities = 68/312 (21%), Positives = 125/312 (40%), Gaps = 21/312 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 LD L L + +V+ AA +N++ S L KLR F DPLFV + PTP Sbjct: 5 LDFKSLRFFSALYRLGNVSPAADALNISQPTGSLLLKKLRDHFADPLFVRVGQRMMPTPR 64 Query: 68 MVSMEQNLAEWMQMSNL--LLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYP- 124 ++ + +Q+++ + F + M +L L + Q+ Sbjct: 65 ADAIAPTVFTLLQLADNDLAVKPEFLPQQSQRNFTIGMTDISQMTLLPLLQIALQQQAAD 124 Query: 125 QATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 T ++N D +L+A+ G+ D+ L+ LP ++ + LF Sbjct: 125 GITFTIQNLDEQTLNALESGKCDLAIGY----------LTQLPDSVYQQHLFDQSYVCLA 174 Query: 185 RKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 ++HP + + + + H++I E + +D L E R IA++LP F + + Sbjct: 175 AENHPRIRTQLRAEDWRQEKHLAIRVEGTAHGDMDKRLDEHSMPRRIALTLPSFLGTGEL 234 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 A+ D + + + ++ + + LP P + +WH+R +P Sbjct: 235 VAESDMIAVV-PEQVARHITRRYPCRSWPLPFPL-------ARIAIRQVWHQRLHRDPGH 286 Query: 305 VWLRETIKNLYA 316 +WLR I L Sbjct: 287 IWLRSLIAALAD 298 >UniRef50_Q0BYJ0 Transcriptional regulator, LysR family n=1 Tax=Hyphomonas neptunium ATCC 15444 RepID=Q0BYJ0_HYPNA Length = 297 Score = 263 bits (672), Expect = 9e-69, Method: Composition-based stats. Identities = 69/315 (21%), Positives = 135/315 (42%), Gaps = 25/315 (7%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 ++ +LDLNLL L+ + ERS+T+A++ +++T AVS +L++LR F+DPLFV G+ Sbjct: 1 MNLRSLDLNLLPVLEAIYAERSLTRASEVLHITQPAVSNALSRLRLHFEDPLFVREGRGV 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTP--RGLKFELAAESPLMMIMLNALSKQIY 120 PT + ++ + E + L+ P F +++ I+ +++++ Sbjct: 61 KPTAMTEALMPAIRESLDKLRNGLEPRSVFEPSRSTRVFNISSRDASAHILAPPIARRLE 120 Query: 121 QRYPQATIK-LRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 + P I + + G +D+ ++ ++ +L S Sbjct: 121 VQAPGVRISWSQPQRSAIASELASGRLDLAIDVQDLRG----------ADLERVLLSSTK 170 Query: 180 PCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFE 239 L DHP ++ LD F HI++ + ++ + + LG T LP ++ Sbjct: 171 YVCALASDHPLANEPLTLDKFFSMRHIAVSSRREGRSLIEEMARSLGHRITPVHRLPHYQ 230 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 +L + L A P + L ++ LP F L WH+ + Sbjct: 231 PALEVVRCTHLALAAPQP-----VTEGSGLAVMKLPFDFPSPGSM-------LYWHREYA 278 Query: 300 HNPKIVWLRETIKNL 314 +P ++WLR I+++ Sbjct: 279 QDPALMWLRGLIRDV 293 >UniRef50_D1SW87 Transcriptional regulator, LysR family n=1 Tax=Acidovorax avenae subsp. avenae ATCC 19860 RepID=D1SW87_9BURK Length = 330 Score = 262 bits (671), Expect = 1e-68, Method: Composition-based stats. Identities = 68/321 (21%), Positives = 122/321 (38%), Gaps = 23/321 (7%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 +I ++DLNL L Q + RSVT A +R+ +T SAVS +L ++R F+D LFV S G+ Sbjct: 1 MNIHSIDLNLFLVFQAIFATRSVTLAGERLGMTQSAVSNALKRMRERFNDVLFVRSAEGM 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQT--PRGLKFELAAESPLMMIMLNALSKQIY 120 PTPL + + E + + +D+ G F +A ++M+ L Sbjct: 61 VPTPLAERLIGPVEEGLAAFSQAVDQGRTFEAGTSGRLFRIAVNDIGQLVMMPRLLSLAR 120 Query: 121 QRYPQATIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 P + + ++ + G++D+ E + + + LF + Sbjct: 121 GLAPGIRFETVDVPRAEARQRMLHGQIDVALGSWEP----------MGPSFYQQRLFDET 170 Query: 180 PCVWLRKDHPA-LHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGR--ERTIAMSLP 236 V + + P + LD +L HI+ + L L+ +G R + ++ Sbjct: 171 FVVLVARASPLGTRDSIALDDYLAAEHIAYRPRGTTDHQLQQALERVGALDRRRVVLTAA 230 Query: 237 EFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHK 296 + A +L A L ++ P + WH+ Sbjct: 231 HSLGLSSIVATTGLVLTAPQRLAQAMVASRSDLHILNAPFEV-------APFEISQQWHE 283 Query: 297 RNSHNPKIVWLRETIKNLYAS 317 R + WLRE + L+ Sbjct: 284 RFHQDSGNRWLRELMFGLFHE 304 >UniRef50_D2B6V0 LysR family transcriptional regulator n=5 Tax=Actinomycetales RepID=D2B6V0_STRRD Length = 313 Score = 262 bits (671), Expect = 1e-68, Method: Composition-based stats. Identities = 75/312 (24%), Positives = 128/312 (41%), Gaps = 20/312 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 LDLNLL+ L L++E SV AA R+N + A+S++L ++R +DP+ V + L PTP Sbjct: 2 LDLNLLVALDALLEEGSVAGAAARLNTSAPAMSRTLGRIRRQLNDPVLVRAGRHLVPTPR 61 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQIYQRYPQ 125 + + + + ++ ++ LL P F L A L+ + L + QR P Sbjct: 62 ALELHAAVRDLVRQASALLVPAGDPAPATLARTFNLQASDMLLSALAAPLVLAVGQRAPG 121 Query: 126 ATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 ++ + A+ G VD+ ++ E L + R Sbjct: 122 VVLRFLPDTLEGTSALREGRVDLEIG----------VIDHAAPETCVEPLGTGRIVGMAR 171 Query: 186 KDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMA 245 +DHP + + L F H+ + +D++L G R A+++ +L +A Sbjct: 172 EDHPLVIKGVTLRRFADAKHVGVSRHGRLHGPIDDLLAARGLRRRTAVTVSSHSMALLLA 231 Query: 246 AQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIV 305 Q D + LA AP L +PL EV + WH RN + Sbjct: 232 RQSDLVCLAPAPAD-DDLPAALGLRAFEIPLELP-------EVEVAMAWHPRNDADGGQR 283 Query: 306 WLRETIKNLYAS 317 WLR+ ++ + Sbjct: 284 WLRDQVREVLRG 295 >UniRef50_Q9FD34 PnbR n=2 Tax=Pseudomonas RepID=Q9FD34_PSEPU Length = 348 Score = 262 bits (670), Expect = 1e-68, Method: Composition-based stats. Identities = 74/340 (21%), Positives = 124/340 (36%), Gaps = 43/340 (12%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 LDLNL+ +M+ERSV +A++R++++ SAVS +L++LR +FV + G+SP Sbjct: 23 FDKLDLNLIRVFDAVMEERSVLRASQRLHLSQSAVSHALSRLREGLGQEIFVRTGKGMSP 82 Query: 65 TPLMVSMEQNLAEWMQMSNLLLDK---PHHQTPRGLKFELAAESPLMMIMLNALSKQIYQ 121 T + + L + + L + P F +AA + +L L+ Q+ + Sbjct: 83 TSYALEISGALHAALLSMSKALSQAATPFSPQSVCRSFVIAANDYVSATLLPQLNHQLSK 142 Query: 122 RYPQATIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 P +++ D + I G +D+ S P VLF D Sbjct: 143 VAPGIDLQITPATRLDLAEQIDLGRIDVAIGTFRSVPERFRTKP---------VLFQDE- 192 Query: 181 CVWLRKDHPALHQTWNLDTFLRYPHISICWEQSD---------------------TWALD 219 HP L +RYP + AL+ Sbjct: 193 VFICSGTHPISANKPQLQDLVRYPLAVVSLGGEGEGMLSGYILERGLARQAQMYDRTALE 252 Query: 220 NVLQELGRERTIAMSLPEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFD 279 L E G + LP F + + L + P + + + + LP P Sbjct: 253 QALNEAGLSMRRQIVLPHFLALPMLLEGSELLAIVPQP-LARTFARTLGFKIKPLPYPAA 311 Query: 280 ESQQKKLEVPFTLLWHKRNSHNPKIVWLRETIKNLYASMA 319 Q L+WH N ++P +WL E I ++ Sbjct: 312 RQQ-------LDLIWHSSNDNDPAQLWLHEQISEAANEIS 344 >UniRef50_B2JFW9 Transcriptional regulator, LysR family n=39 Tax=Burkholderia RepID=B2JFW9_BURP8 Length = 342 Score = 261 bits (669), Expect = 2e-68, Method: Composition-based stats. Identities = 76/314 (24%), Positives = 127/314 (40%), Gaps = 23/314 (7%) Query: 6 TTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPT 65 +LD+ L+ L+ L+ ERSVT+ A R+N T A+S +L KLR +DP+ V G+ PT Sbjct: 7 ASLDIWLVRVLRTLLVERSVTQTALRLNQTQPAISTALRKLRETLNDPILVRGKSGMVPT 66 Query: 66 PLMVSMEQNLAEWMQMSNLLLDKPHHQTPR--GLKFELAAESPLMMIMLNALSKQIYQRY 123 S+ + ++ + + P F +AA L + + Q + Sbjct: 67 EYGESLLAAAQKVLRDVDFVATPHGDFDPARSRRTFRIAAPDYLNDFFMPTVIAQFRETA 126 Query: 124 PQATIKLRNWDY--DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPC 181 P A +++ + D A+ GE+D+ L + LFSD Sbjct: 127 PHARLEIESLGPLFDHTCALDAGELDLVIGNWPKP----------DLRFERSDLFSDTVV 176 Query: 182 VWLRKDHPALHQTWNLDTFLRYPHISI-CWEQSDTWALDNVLQELGRERTIAMSLPEFEQ 240 +R DHP D +L PH++ + + A+D R I +LP F Sbjct: 177 CMMRADHPLAKAPLTRDAYLAAPHLAPAHYSGARGGAIDTGFARARASRRIVATLPYFGL 236 Query: 241 SLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 + Q D + T R+ +Y + L +V +P+PF + +WH + Sbjct: 237 VPQVLLQSDLIFTTT-RRFALHYAAMLPLAVVDVPIPFPRIKC-------YQMWHPQPDR 288 Query: 301 NPKIVWLRETIKNL 314 I WLR + + Sbjct: 289 PSDIAWLRGLMAQV 302 >UniRef50_A4Z170 Putative transcriptional regulatory protein, LysR-family n=1 Tax=Bradyrhizobium sp. ORS278 RepID=A4Z170_BRASO Length = 313 Score = 261 bits (669), Expect = 2e-68, Method: Composition-based stats. Identities = 80/321 (24%), Positives = 130/321 (40%), Gaps = 27/321 (8%) Query: 1 MKKS----ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFV 56 MK + +DLNLL+ + L+ ER+VT+AA R+ + + SK+L +LR F DPLF+ Sbjct: 1 MKNDQMPSLAHVDLNLLVLFEALLSERNVTRAAVRVGLAQPSASKALDRLRHLFGDPLFL 60 Query: 57 NSPLGLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGLK--FELAAESPLMMIMLNA 114 +P G+ PTP + + +A ++ L+ P + LA ++L Sbjct: 61 RAPGGMRPTPRALELAPEIALVLERVRALVAAELPFDPATARGSLRLAMSDAAEFVLLPG 120 Query: 115 LSKQIYQRYPQATIKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYE 173 L Q+ P T++ R D D + G +D + LP Sbjct: 121 LVAQLAGTAPGVTLQARPLDKDRVFAELDEGRLDAVVG----------VFRELPKRFRSA 170 Query: 174 VLFSDVPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAM 233 LF + R DHP L L+T++ PH+ + A+D+ L+ +G R +A Sbjct: 171 PLFEERFVCLARADHPRLATGLTLETYVELPHLLVTLRDDRKGAVDDALEAIGLHRRVAA 230 Query: 234 SLPEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLL 293 +L F + A D +AT P L PL ++ L+ Sbjct: 231 TLTRFLALPPVLAFSD--AIATVPSRFAA-ASAPNCRLHEPPLALPRWTEQ-------LV 280 Query: 294 WHKRNSHNPKIVWLRETIKNL 314 W P I W + I++ Sbjct: 281 WRAGAEREPMIAWGLQLIRSA 301 >UniRef50_C0ZNV8 Putative LysR family transcriptional regulator n=1 Tax=Rhodococcus erythropolis PR4 RepID=C0ZNV8_RHOE4 Length = 298 Score = 261 bits (669), Expect = 2e-68, Method: Composition-based stats. Identities = 73/317 (23%), Positives = 122/317 (38%), Gaps = 24/317 (7%) Query: 1 MKKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPL 60 M + DLNLL L+ E SVT AA+R+N++ A S++L +LR DDP+FV + Sbjct: 1 MAMDM---DLNLLRVFDALVAEGSVTGAAERLNLSIPATSRALGRLRRAMDDPIFVRAGR 57 Query: 61 GLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPR--GLKFELAAESPLMMIMLNALSKQ 118 GL PTP + + ++ + LL + P F + + AL ++ Sbjct: 58 GLVPTPFALRAAPQVRSLLEGAQGLLIDRKNFEPAELERTFVIRINEGTAASLTPALVRR 117 Query: 119 IYQRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSD 178 P A I+ + +D++ G +D+ + E+L+ + Sbjct: 118 FAAEAPNAVIRCVGEGNEDVDSLRNGSIDLDIGADPLPSS----------DVCSEILYRE 167 Query: 179 VPCVWLRKDHPALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPE 237 + K P L +PH+S +D+ L +G R + + Sbjct: 168 GHVGLVSKSSPLARTAQPTLAQLCEHPHVSTSRRGRTHGPIDDALSAVGMRRRVIAVVAS 227 Query: 238 FEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKR 297 + MAA D + L R +Y+ + A+P V WH R Sbjct: 228 PVAAALMAADSDLVALV-PERLARYFAARLDVAWFAVPTELPA-------VTIHQQWHGR 279 Query: 298 NSHNPKIVWLRETIKNL 314 H+P WLRE ++ Sbjct: 280 LDHDPAHKWLREQVREA 296 >UniRef50_A0K340 Transcriptional regulator, LysR family n=1 Tax=Burkholderia cenocepacia HI2424 RepID=A0K340_BURCH Length = 303 Score = 261 bits (669), Expect = 2e-68, Method: Composition-based stats. Identities = 71/320 (22%), Positives = 131/320 (40%), Gaps = 22/320 (6%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 LDLNLL+ L L+ +R +T+AA+R+N++ SA+S LAKLR +FDD L V L Sbjct: 1 MRFNRLDLNLLVTLDALLDDRRITRAAERLNLSQSAISGMLAKLREYFDDELLVPVGRNL 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNL--LLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIY 120 TPL + Q + + + +D F++A ++ ++++ L I Sbjct: 61 ELTPLARELVQPVRDLLLQVQTIVAIDPAFEPANARRHFKIATSDYVINVLMHRLIPVIE 120 Query: 121 QRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 P T++L D+ + + RGE D ++ LF D Sbjct: 121 PLAPYLTLELMP-QEDAPERLRRGEYDFLIIPEPFKADDHPAIA----------LFDDSY 169 Query: 181 CVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALD-NVLQELGRERTIAMSLPEFE 239 + + A+ + ++ + + H++ + D ++ G R + ++ +F Sbjct: 170 VGVVWNGNRAVGASIDVARYEQLDHVATLLGWPRLPSYDSRYVEAQGIRRRVRVTTSDFT 229 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 + ++ R + L LV L P + ++ L WH+ Sbjct: 230 SMAPVLIGT-QMIATMHRRLATELTRRMPLRLVELEFPIPQMRE-------FLQWHEYRE 281 Query: 300 HNPKIVWLRETIKNLYASMA 319 +P WLRE I ++ A +A Sbjct: 282 KDPCHRWLREQIISVAAGLA 301 >UniRef50_C4I668 Transcriptional regulator, LysR family n=80 Tax=Proteobacteria RepID=C4I668_BURPS Length = 297 Score = 261 bits (669), Expect = 2e-68, Method: Composition-based stats. Identities = 69/305 (22%), Positives = 116/305 (38%), Gaps = 25/305 (8%) Query: 15 CLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSMEQN 74 L L+ E +VT+AA R+N++ +VS LAKLR F DPL + P G+ PT + + Sbjct: 14 TLDALLSEHNVTRAAARLNLSQPSVSIHLAKLRDIFGDPLLLPGPRGMRPTARADELREP 73 Query: 75 LAEWMQMSNLLLDKPHHQTPR--GLKFELAAESPLMMIMLNALSKQIYQRYPQATIKLR- 131 L ++ + P + +AA ++ + P + + Sbjct: 74 LRRALETLGRAVSPGAPFDPAASAHTWRVAASDYSESTVVLPALNGLRAAAPGTRLAVVE 133 Query: 132 NWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPAL 191 +G++D+ F E P + + LF++ + R HP L Sbjct: 134 TVPSRIAKQAEQGDIDLAFHITE----------CAPGNLRHRALFTERYVLVGRAGHPRL 183 Query: 192 HQTWNLDTFLRYPHISICWEQSD-TWALDNVLQELGRERTIAMSLPEFEQSLFMAAQPDN 250 + L F + H+ + + D L +LG R + +S+P F + A D Sbjct: 184 KRRPTLAQFCKLDHVIVSPDGGGFQGGTDQALAKLGLARRVVLSVPHFLFMMSAVANSD- 242 Query: 251 LLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWLRET 310 L+A P L +V P+ +LWH+R+ +P WLRE Sbjct: 243 -LVAMMPSRLVR--DSRALQVVEPPVDVP-------GFRMAMLWHERSHRDPAHQWLREH 292 Query: 311 IKNLY 315 I Sbjct: 293 IAASV 297 >UniRef50_A3YI62 Transcriptional regulator, LysR family protein n=2 Tax=Oceanospirillaceae RepID=A3YI62_9GAMM Length = 305 Score = 261 bits (668), Expect = 2e-68, Method: Composition-based stats. Identities = 59/318 (18%), Positives = 127/318 (39%), Gaps = 20/318 (6%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 + DLNLL+ + L+ E V++AA+++ ++ SA+S +L +LR DDPL V + GL+P Sbjct: 4 LRQFDLNLLIIFEALISECHVSRAAEKVFLSQSAMSHALNRLRTQLDDPLLVKTENGLTP 63 Query: 65 TPLMVSMEQNLAEWMQMSNLLLDKPHHQTP--RGLKFELAAESPLMMIMLNALSKQIYQR 122 TP ++M ++ + + + + F +A+ ++ Q+ Sbjct: 64 TPRALAMLPDVRQALNLVERTISPAESFQASLSDRTFRIASTDYFETVVFPEWFSQLQLS 123 Query: 123 YPQATIKLRNWDYDS-LDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPC 181 P +++ +S L + +GE+D+ + LP + + ++ Sbjct: 124 APNVRVEIDLISEESALLRLEKGEIDLIVGMDKE--------QKLPSHLIVQDWLTEKQV 175 Query: 182 VWLRKDHPALHQTWNLDTFLRYPHIS-ICWEQSDTWALDNVLQELGRERTIAMSLPEFEQ 240 + + +L+ +L PHI E +D L R S + Sbjct: 176 CLASIQNQNARGSLSLEAYLALPHIRFFDLEGKTDSNVDRWLASQTLARNHIASTTNYMA 235 Query: 241 SLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 + + A + + + + + Q+ + +V P + TL+ H + Sbjct: 236 AARIVANTEAI-ITLPYHMAKLFTQMMPVSIVTPPDGLPA-------IDMTLVQHPLYAK 287 Query: 301 NPKIVWLRETIKNLYASM 318 + I+WL++ + S+ Sbjct: 288 DSGIIWLKQVLCEHVKSL 305 >UniRef50_A6GJJ5 Regulatory protein, LysR:LysR, substrate-binding n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GJJ5_9DELT Length = 304 Score = 261 bits (668), Expect = 2e-68, Method: Composition-based stats. Identities = 68/304 (22%), Positives = 127/304 (41%), Gaps = 21/304 (6%) Query: 19 LMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSMEQNLAEW 78 L++E +VT+AA+ + ++ A+S LA+LR FDDPL + S G+ PT + + + +A Sbjct: 2 LVREGNVTRAARALGISQPAMSHRLARLRERFDDPLLLPSGAGMQPTARALQLVEPVARG 61 Query: 79 MQMSNLLLDKPHHQTP--RGLKFELAAESPLMMIMLNALSKQIYQRYPQATIKLRNWDYD 136 + + L P +F +A ++L +++ P+ +++ + Sbjct: 62 LLEFDAALRSEARFDPRTSTRRFTIACADFGDFVVLPRALSRLHAEAPEIEVRMCRPGPE 121 Query: 137 SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPALHQTWN 196 + RG +D+ G P + +R DHPA+ + Sbjct: 122 LERGLERGLIDVAVLGNPCLPA---------ANFRQRRVLDGRFATTVRADHPAVGPRMD 172 Query: 197 LDTFLRYPH--ISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQPDNLLLA 254 LDTF+ PH I+ E +D+ L +G R +A+ +P + + +A++ D +L A Sbjct: 173 LDTFVALPHLAIAPSSESDFGGVIDDALARVGEARRVAVRVPSYSTAPLLASRSDLVLTA 232 Query: 255 TAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWLRETIKNL 314 + L + PLP ++WH+R P WLR T+ + Sbjct: 233 PVGVILEA-ASFVSLRVFDPPLPIP-------PSDVRMVWHERWQREPGHAWLRTTLAEV 284 Query: 315 YASM 318 + Sbjct: 285 MTGL 288 >UniRef50_Q2CCM2 Transcriptional regulator, LysR family protein n=1 Tax=Oceanicola granulosus HTCC2516 RepID=Q2CCM2_9RHOB Length = 313 Score = 261 bits (668), Expect = 2e-68, Method: Composition-based stats. Identities = 85/324 (26%), Positives = 133/324 (41%), Gaps = 26/324 (8%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 ++ DLNLL L L++ERS T+AA R+ ++ AVS +L +LRA D LF+ GL Sbjct: 1 MNLAGFDLNLLKVLDALLRERSTTRAAARVGLSQPAVSAALGRLRAALGDELFLRRGQGL 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQIY 120 T ++E L E + LL P P F LA +++ L+ ++ Sbjct: 61 VATDFARALEAPLRETLDRLEDLLAAPQEFDPATAKRTFRLAGIDFFAEMLMPQLAARLA 120 Query: 121 QRYPQATIKLRNWDYDSLDA-ITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 P I+L N +A + R E D+ L+ P ++ +LF Sbjct: 121 AAAPGVRIQLLNLVPREYEATLERYEADVALFP----------LTGSPEWAEHRLLFRSP 170 Query: 180 PCVWLRKDHPAL-----HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMS 234 + +P L T LD F HI + + D+ L +GR+R + MS Sbjct: 171 FVLAAAAGNPRLAHLAEGDTVPLDLFCDLGHILFSLDGNLRAMGDDALAAVGRQRRVVMS 230 Query: 235 LPEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLW 294 + F L A + + L + + L ALP+P + ++W Sbjct: 231 MASFPGILRAVAGSEAVSLVPV-QLARKLQGEMGLRCFALPMPLEPPV-------IGMMW 282 Query: 295 HKRNSHNPKIVWLRETIKNLYASM 318 H+R+S P WLRE I L + Sbjct: 283 HRRSSATPAHAWLREQIVELMTPL 306 >UniRef50_A1UXD8 Transcriptional regulator, LysR family n=41 Tax=cellular organisms RepID=A1UXD8_BURMS Length = 355 Score = 261 bits (667), Expect = 3e-68, Method: Composition-based stats. Identities = 66/300 (22%), Positives = 125/300 (41%), Gaps = 20/300 (6%) Query: 15 CLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSMEQN 74 LMQE+++++AA R++++ AVS +L +LR +PLF + G++PT ++ + Sbjct: 59 VFDALMQEQNLSRAAIRLHMSQPAVSNALTRLRQQLGEPLFTRTARGMTPTAQARTLYEP 118 Query: 75 LAEWMQMSNLLLDKPHHQTPRGLK-FELAAESPLMMIMLNALSKQIYQRYPQATIKLRNW 133 + + + + + L P F+L+ ++L L I R P + +++ Sbjct: 119 VRQALYLLQIGLGPQADFEPDTHHLFKLSMNDYGQTVLLPDLLAHIKSRAPNVMLSVQSD 178 Query: 134 DYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPALH 192 D S+ +T G +D+ L + YE L + V R HPA Sbjct: 179 DAGSIPAQLTTGTLDLAIDY----------LHFDNPELCYEPLHEEHLVVIGRAGHPAFA 228 Query: 193 QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQPDNLL 252 L + H+SI L+ VL R + + +P + + A+ D L Sbjct: 229 GGLALRGYEESGHVSIQPRDRRGSPLEIVLGSARVRRVVHLQVPHYLTIPALVAKSDLLG 288 Query: 253 LATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWLRETIK 312 R + + ++ L + LP+ + +L+WH++ P + WLRE + Sbjct: 289 -TIPRRLAERFADVYALQIAPLPIDI-------APIQVSLIWHRQQDAQPGLRWLREQVV 340 >UniRef50_A6CYZ8 Hypothetical transcriptional regulator, LysR family protein n=1 Tax=Vibrio shilonii AK1 RepID=A6CYZ8_9VIBR Length = 304 Score = 260 bits (666), Expect = 4e-68, Method: Composition-based stats. Identities = 77/312 (24%), Positives = 135/312 (43%), Gaps = 22/312 (7%) Query: 9 DLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLM 68 +LNLL L++L+ E+ V++AA+R+N+T SAVS+ L++LR + DPL V + TP Sbjct: 6 NLNLLYTLEVLLAEKHVSRAAERLNLTQSAVSRQLSQLRDIYHDPLLVRNGNHYVLTPRA 65 Query: 69 VSMEQNLAEWMQMSNLLLDKPHHQTPR--GLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + L + Q +L + P F ++ + +L L + + P Sbjct: 66 ERLGAELEDLFQNITKVLGQA-DFDPLLFDQTFTFSSSDYVAQYILPELVELLSSLAPTM 124 Query: 127 TIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRK 186 R W+ D+L ++ E+D+ + +L PL + + + D+P + RK Sbjct: 125 QFAYRLWEPDNLAKLS--EIDV--------QLASTMLPEAPLGLSSQQIGEDIPVIVTRK 174 Query: 187 DHPALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMA 245 +HP +T YPHI I LD ++ +R I +S P F + + Sbjct: 175 NHPLSGTKTITEQELGAYPHIRISGGGDKDSFLDREMKARSLKRRILVSTPFFSSAFALL 234 Query: 246 AQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIV 305 Q D LL + +L ++ +P + L+WH + H P + Sbjct: 235 QQTDALLTVPL-HIAVNLKKTQKLHVIDIPFTVPT-------YKYWLIWHPKYDHEPAHI 286 Query: 306 WLRETIKNLYAS 317 W RE + ++ S Sbjct: 287 WTREHVLSIMRS 298 >UniRef50_B9JQ31 Transcriptional regulator n=1 Tax=Agrobacterium radiobacter K84 RepID=B9JQ31_AGRRK Length = 296 Score = 260 bits (666), Expect = 4e-68, Method: Composition-based stats. Identities = 66/313 (21%), Positives = 121/313 (38%), Gaps = 22/313 (7%) Query: 9 DLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLM 68 DLNL+ + + SV+ AA ++N+T +VS +L++LR DD LF + G+ PT + Sbjct: 3 DLNLIRAFIAIYETESVSGAAVKLNLTQPSVSHALSRLRDMLDDTLFTRTRDGMKPTFVA 62 Query: 69 VSMEQNLAEWMQMSNLLLDKPHHQTP--RGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 M + + P F+LA M L + ++ Q P+ Sbjct: 63 ERMYGIFRSALSEIETAIASRWSFDPKSSNQVFKLAFSDLGEMTFLPHILPRLSQEAPKV 122 Query: 127 TIKLRNWDYDSLDA-ITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 I++ + + LD G++D S E +F + + Sbjct: 123 GIEVVELEVEKLDDWFATGKIDAAIFNSTSAKVQS----------RSEPIFQERYVCLVS 172 Query: 186 KDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMA 245 HP + +L+ +L HI + S +++ ++ +G R +++ LP F + Sbjct: 173 ARHPRIRDQVSLEQYLSEGHIVVSSH-SGHRQVEDQIRAIGAARQVSLRLPHFTGLHDIV 231 Query: 246 AQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIV 305 A+ + LL R + + +PLP E L W + + Sbjct: 232 AKTE-LLATLPSRTAHMFASSGMVKYCTIPLPIP-------EFEVRLHWRETDGEIEAQA 283 Query: 306 WLRETIKNLYASM 318 WLRE +K+ + Sbjct: 284 WLREILKSCLQGL 296 >UniRef50_A3VWI6 Transcriptional regulatory protein n=1 Tax=Roseovarius sp. 217 RepID=A3VWI6_9RHOB Length = 314 Score = 259 bits (664), Expect = 6e-68, Method: Composition-based stats. Identities = 67/312 (21%), Positives = 130/312 (41%), Gaps = 23/312 (7%) Query: 9 DLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLM 68 DLNLL ++M ER++T+AA R+N+T +VS ++ +LR D LF+ G+ PT Sbjct: 8 DLNLLRIFHVVMLERNMTRAAARLNMTQPSVSNAIQRLREVLADDLFIKVSGGVVPTAKA 67 Query: 69 VSMEQNLAEWMQMSNLLLDK-PHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQAT 127 ++ + +Q +D + F +A + ++ ++ ++ P + Sbjct: 68 EAIWPTIRNSIQSLIQTIDPERFEPSVATDSFRIAMSDFVATQLILPVAGPLFNAAPHVS 127 Query: 128 IKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRK 186 + L D + + G+ D+ ++ I +L + +RK Sbjct: 128 LVLCQNSVDNIVPGLIDGQFDMA----------AGVIPYKEARIRSILLKTLTYVCAMRK 177 Query: 187 DHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAA 246 DHP + F+ H+ + +D L + G R IA+++ + + + + Sbjct: 178 DHPLAKEPLTFADFMAARHLQVSLSGRS-GFIDRYLTDRGMFRDIALTIRHYTLAPEILS 236 Query: 247 QPDNLLLATAPRYCQYYNQLHQ-LPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIV 305 D L+A P ++ + L A P+P E +LLWH+RN P Sbjct: 237 STD--LIAILPSEVISHSHQYDLLKTTAPPIPVYED-------SISLLWHERNDAMPAHR 287 Query: 306 WLRETIKNLYAS 317 W+RE + ++ + Sbjct: 288 WMRERLIDIVKA 299 >UniRef50_D2C014 Transcriptional regulator, LysR family n=1 Tax=Dickeya dadantii Ech586 RepID=D2C014_DICD5 Length = 303 Score = 259 bits (664), Expect = 7e-68, Method: Composition-based stats. Identities = 71/298 (23%), Positives = 120/298 (40%), Gaps = 25/298 (8%) Query: 23 RSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNS--PLGLSPTPLMVSMEQNLAEWMQ 80 +++T AA R+ ++ A+S L++LRA F D LF+ S G+ PTP S+ +A + Sbjct: 22 QNITHAAARLGISQPAMSARLSRLRATFGDQLFIPSPHGRGVLPTPRAESLRPQIASVLH 81 Query: 81 MSNLLLDK-PHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQATIKL-RNWDYDSL 138 + +L+ F +A +++ L Q + P ++ Sbjct: 82 DISAMLEPIHFDAASSSRTFVIALHENPALMLGADLVNQFSEAAPGIRLRFALPESARLP 141 Query: 139 DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPALHQTWNLD 198 + + G++DI + A LF D RK HP +L Sbjct: 142 EQLETGDIDIYIGVN----------AGAHDAWIRRKLFDDEFATAQRKGHPRGSAPLDLK 191 Query: 199 TFLRYPHISICWEQS-DTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQPDNLLLATAP 257 ++ PH+ + E T +D L LG +R++ MS + + + A D LL Sbjct: 192 SYCALPHLVVSSEGDPFTGFVDQTLAGLGYQRSVVMSTQSYAMAPPIVAGTD-LLCTLPR 250 Query: 258 RYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWLRETIKNLY 315 R Q + Q L + PLP + ++ WH +NSH+P VWLR + Sbjct: 251 RMLQRFTQT--LDIFDPPLPL-------QPIVISMYWHPKNSHDPANVWLRAQLLCAA 299 >UniRef50_Q7WJY9 Probable LysR-family transcription regulator n=1 Tax=Bordetella bronchiseptica RepID=Q7WJY9_BORBR Length = 329 Score = 259 bits (663), Expect = 1e-67, Method: Composition-based stats. Identities = 74/319 (23%), Positives = 133/319 (41%), Gaps = 23/319 (7%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 + +D+ LL L +LM ERSV++ A R++V+ AVS +LA+LR FDDPL + S G+ P Sbjct: 22 MDNIDIKLLRTLLVLMSERSVSRTADRLDVSQPAVSHALARLRILFDDPLLLRSRAGMVP 81 Query: 65 TPLMVSMEQNLAEWMQMSNLLLDKPHHQTP--RGLKFELAAESPLMMIMLNALSKQIYQR 122 T +E + + + L +P P F L+A +++ + + + Sbjct: 82 TDRASEIEARVRRLLAEYDALAHRPQPFDPSVSERHFVLSAPEYAEHLLMPPIFRHLRAH 141 Query: 123 YPQATIKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPC 181 P +++R D + + + + GEVD+ + L ++ LF D Sbjct: 142 APNIRVEVRAPDPERAYELLESGEVDLRIA----------WLRKPAQSLRSMQLFQDRIV 191 Query: 182 VWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTW--ALDNVLQELGRERTIAMSLPEFE 239 +DHPAL T +L FLRYPH + +D ++ LG++ + F Sbjct: 192 CIADRDHPALDGTLSLADFLRYPHARPWGMGRNMSGRVIDEAVELLGKKLAPPFLVQNFL 251 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 + D L + + + ++ +PL + + WH+R+ Sbjct: 252 TIPYTITGSDLLA-VLPLVLARAFAAQQPIQILEVPLRLPRMR-------YGAYWHERSH 303 Query: 300 HNPKIVWLRETIKNLYASM 318 + WLR + + Sbjct: 304 KDVGHKWLRSVVLQAAQGL 322 >UniRef50_B4ELV6 LysR family regulatory protein n=1 Tax=Burkholderia cenocepacia J2315 RepID=B4ELV6_BURCJ Length = 306 Score = 259 bits (662), Expect = 1e-67, Method: Composition-based stats. Identities = 67/299 (22%), Positives = 122/299 (40%), Gaps = 17/299 (5%) Query: 22 ERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSMEQNLAEWMQM 81 ERSVT+A R+ +T A S++L +LR D + V +P GL TP S+ Q ++ + Sbjct: 23 ERSVTRAGMRLGLTQPAASRALGRLRTLLHDRVVVRTPKGLEFTPRAASLAQRVSRVLTE 82 Query: 82 SNLLLDKP-HHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQATIKLRNWDYDSLDA 140 + ++ F +A+ + + ++ ++ ++ + P + + ++++ Sbjct: 83 AAGIVAPAVFDPATARGLFSIASLDHMALTLIPDVNARLERSAPGLDLDVPPSRSNNVEL 142 Query: 141 ITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPALHQTWNLDTF 200 +T G I + +LP I L+ D +R HPAL F Sbjct: 143 VTDGTAGIALGVFDDD--------TLPAGIYRRKLYDDNLVCIVRNGHPALSARLTPKRF 194 Query: 201 LRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQPDNLLLATAPRYC 260 H+ + +D L G R IAM LP F + + A+ D L+ R Sbjct: 195 AALSHVLVTIGGRGGELVDAALARQGLHRRIAMRLPHFLVAPMVVAKSDMTLV-LPQRLA 253 Query: 261 QYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWLRETIKNLYASMA 319 ++ + LV LP+ +++WH+R +P WLR+ I + M Sbjct: 254 RHVALSMPVTLVKLPVEVP-------SFSPSMIWHERTHDDPAHGWLRQQIVEVAREMG 305 >UniRef50_A7JRS0 Possible LysR family transcriptional regulator n=3 Tax=Mannheimia haemolytica RepID=A7JRS0_PASHA Length = 302 Score = 259 bits (662), Expect = 1e-67, Method: Composition-based stats. Identities = 71/316 (22%), Positives = 129/316 (40%), Gaps = 24/316 (7%) Query: 4 SITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLS 63 I TLD NLL +L+ E +V++AA+R+++T A+S L +LR F+DPLFV G+ Sbjct: 3 DIRTLDFNLLKAFVVLLDECNVSRAAQRLSITQPAMSGILNRLRESFNDPLFVRVQHGMQ 62 Query: 64 PTPLMVSMEQNLAEWMQMSNLLLDKP-HHQTPRGLKFELAAESPLMMIMLNALSKQIYQR 122 PT + + Q +Q + +L P + +AA + I+ L ++ + Sbjct: 63 PTDRALQLGQTARNILQDISSMLQPPILEPEHLNMTLRIAAMDYVQQIIALPLILRLRRL 122 Query: 123 YPQATIKLRNWDYDSLDAI-TRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPC 181 P + L ++ + + ++D+ R+ L VL+ + Sbjct: 123 APNVKVALLPVQGQNIKTLFEQKKIDLALVSRQH----------LSTDTLKTVLYEERYV 172 Query: 182 VWLRKDHPALHQTWNLDTFLRYPHISICW-EQSDTWALDNVLQELGRERTIAMSLPEFEQ 240 + K HP +LD F P + + + A D LQ++G +R + +S+ Sbjct: 173 CAMSKTHPMAQTPLSLDQFCNLPFAMLSYNGGEFSGATDLALQKIGLQRKVMVSVNHISL 232 Query: 241 SLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 + D L+A P L + L P+ + + WH+R Sbjct: 233 LPQLLQGSD--LVAVLPERLAK--TLPNVYLQPPPIEVE-------GFTMMMAWHERTEQ 281 Query: 301 NPKIVWLRETIKNLYA 316 + WLRE ++ + Sbjct: 282 DTAHRWLREVLQGVVK 297 >UniRef50_Q081Z6 Transcriptional regulator, LysR family n=1 Tax=Shewanella frigidimarina NCIMB 400 RepID=Q081Z6_SHEFN Length = 303 Score = 258 bits (661), Expect = 1e-67, Method: Composition-based stats. Identities = 69/315 (21%), Positives = 124/315 (39%), Gaps = 22/315 (6%) Query: 7 TLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTP 66 +DLNL + + E ++TKAA +N++ AVS SL KLR FDD LF+ + PTP Sbjct: 2 KIDLNLFVVFDAIYCEGNITKAASVLNLSQPAVSHSLGKLRTHFDDALFIRQGNEMRPTP 61 Query: 67 LMVSMEQNLAEWMQMSNLLLDKPHHQTPRGLK--FELAAESPLMMIMLNALSKQIYQRYP 124 + ++ ++ E + + L + P + F L+ L L L + + P Sbjct: 62 VAKNVIDDVREALHQLQVCLVQSRQFEPLTSRKSFSLSLHGSLEPYYLPILQQSLSLESP 121 Query: 125 QATIKL--RNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCV 182 + R + + + G++D+ L + I + L D V Sbjct: 122 SINLSSNKRVRRTELENKLASGDIDLAIDT----------LIPVSNNIMHTQLELDQLVV 171 Query: 183 WLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 RK+HPA++ +L T+L+ H+ + + D L +G R I++ + Sbjct: 172 VARKNHPAMNPDLDLATYLKLDHVLVSSRSTGPSLEDFELSRIGLHRKISLRCQHALSAC 231 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 + D LL Y+++ + + +P+ ++ L WH P Sbjct: 232 RVILNNDMLL-TLPKTAAAMYSKMLDIDIHPMPVELP-------DIGVHLYWHVNVDKEP 283 Query: 303 KIVWLRETIKNLYAS 317 WLR + Sbjct: 284 ANKWLRNKMIIAATE 298 >UniRef50_B7VQV6 Transcriptional regulator n=10 Tax=Vibrionales RepID=B7VQV6_VIBSL Length = 315 Score = 258 bits (661), Expect = 1e-67, Method: Composition-based stats. Identities = 67/308 (21%), Positives = 127/308 (41%), Gaps = 20/308 (6%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 + ++LNLL L +L++E V++ A+R+++T SAVS+ LA+LR DPL V L P Sbjct: 2 LGNINLNLLRSLHVLLEECHVSRTAQRLHITQSAVSRQLAQLRDLCGDPLLVRDGNKLVP 61 Query: 65 TPLMVSMEQNLAEWMQMSNLLLDK-PHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRY 123 T + ++ L + + + LLD P + LA+ + +L + ++ + Sbjct: 62 TNRALLLKGKLDDLLGEFDHLLDDKPFDPQDWQGELVLASSDYVAQYILPIIVSEVSKDA 121 Query: 124 PQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVW 183 P + R W + L+ + + + + P + L D Sbjct: 122 PHINLAYRLWQPNFLETLNESGIHLA----------SSMFPKKPDHVSSIKLGEDKSVCL 171 Query: 184 LRKDHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 +R HP Q+ + + + Y HI + D L++ G +R IA+ +P F + Sbjct: 172 MRASHPLAKQSAISSEDIVNYSHIKVTGGGDKDSYSDIALKKQGHKRRIALQVPFFSSAG 231 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 + Q D L++ + + +LP + + L+WH + ++ Sbjct: 232 NVLMQDDYLMIV-PEHIAYNLGRHLDVAYFSLPFETEMH-------TYWLMWHPKYDNDS 283 Query: 303 KIVWLRET 310 W RE Sbjct: 284 AHKWAREK 291 >UniRef50_Q15TE0 Transcriptional regulator, LysR family n=4 Tax=Alteromonadales RepID=Q15TE0_PSEA6 Length = 307 Score = 258 bits (661), Expect = 2e-67, Method: Composition-based stats. Identities = 68/321 (21%), Positives = 127/321 (39%), Gaps = 22/321 (6%) Query: 1 MKKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPL 60 M + +DLNL L L + QE S+T A KR++++ AVS +L++LR + DPLFV Sbjct: 1 MNMLHSKIDLNLFLILVAVYQEGSITGAGKRLHLSQPAVSHALSRLRDKYQDPLFVRHGR 60 Query: 61 GLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQT--PRGLKFELAAESPLMMIMLNALSKQ 118 + T L ++ + + L + + L I L+ Sbjct: 61 KMIATQLCQTIMPRVLSSVAELESTLHDIGDFDVHQYQREMKFGFRDILESIFFPELATD 120 Query: 119 IYQRYPQATIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFS 177 + P T+ R D A+ +DI ++L+ I + ++ Sbjct: 121 LMANTPNITVHSRQVSRLDMEAALESQALDIVI----------DVLTPTSNDIHHTLICD 170 Query: 178 DVPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPE 237 + + RK HP L +L +++ H + ++ S +D L + R A+ Sbjct: 171 EHFSLICRKGHPILSD-MSLANYIKAEHALVTFKDSAVNTVDMALAKHAVARKFALKCEH 229 Query: 238 FEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKR 297 + + + ++ D LL Y + Q + +V LP +P + WHK+ Sbjct: 230 YFAATSVISRCDMLL-TMPNAYARLLKQQMPVEVVPLPFEVPI-------LPVHMYWHKQ 281 Query: 298 NSHNPKIVWLRETIKNLYASM 318 H+P W+R+ + + + Sbjct: 282 AEHDPLNSWMRQKLLAIAKRV 302 >UniRef50_UPI0000383CFA COG0583: Transcriptional regulator n=1 Tax=Magnetospirillum magnetotacticum MS-1 RepID=UPI0000383CFA Length = 329 Score = 258 bits (660), Expect = 2e-67, Method: Composition-based stats. Identities = 82/320 (25%), Positives = 134/320 (41%), Gaps = 25/320 (7%) Query: 6 TTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPT 65 TLD+ + L +L+ E +V++AA+R+ VS +L +LR DPL V L PT Sbjct: 7 ATLDVRAMRTLLVLLTECNVSRAAERLGQAQPTVSLALKRLREMLGDPLLVRYGGSLVPT 66 Query: 66 PLMVSMEQNLAEWMQMSNLLLDKPHHQTPR--GLKFELAAESPLMMIMLNALSKQIYQRY 123 + ++ +L + + L P F LAA + L + L L + I + Sbjct: 67 ERGLDLKVSLEAILSEIDARLTPHPTFDPAHSDRTFRLAANNCLGSVFLPPLVRTIRRAA 126 Query: 124 PQATIKL--RNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPC 181 P T+++ D L + G +D P + L S Sbjct: 127 PGVTVEVGQTPPMEDLLRQMAEGAIDAVIGNWPQP----------PSHLRISTLLSTDIV 176 Query: 182 VWLRKDHPALH--QTWNLDTFLRYPHISICWEQSDT-WALDNVLQELGRERTIAMSLPEF 238 +R +H +L FL H+S +++ +D L ELG +R IA+++PE+ Sbjct: 177 CVMRPNHRLARREGRIDLADFLAEGHLSPTSDRNAQLSPIDGRLIELGLKRRIAVTVPEY 236 Query: 239 EQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRN 298 +M AQ D LL T + + Q LV P ++ + F +LWH Sbjct: 237 AMVPYMLAQSD-LLFTTGRHFAEQIAQSFAFSLVDAP-------EELGRMSFYMLWHDCK 288 Query: 299 SHNPKIVWLRETIKNLYASM 318 H+P WLR TI+++ A + Sbjct: 289 HHSPAHAWLRRTIRSVAADI 308 >UniRef50_A3RSL5 Transcriptional regulators, LysR family n=4 Tax=Ralstonia solanacearum RepID=A3RSL5_RALSO Length = 304 Score = 258 bits (660), Expect = 2e-67, Method: Composition-based stats. Identities = 80/315 (25%), Positives = 127/315 (40%), Gaps = 24/315 (7%) Query: 6 TTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPT 65 LDLNLL Q + Q R+VT AAKR N+T A+S +LA+LR F DPLFV SP G+ PT Sbjct: 4 KRLDLNLLGVFQAIYQTRNVTLAAKRHNITQPAMSNALARLREVFADPLFVPSPYGMRPT 63 Query: 66 PLMVSMEQNLAEWMQMSNLLLDKPHHQTPR--GLKFELAAESPLMMIMLNALSKQIYQRY 123 P + + ++ L P +F + + L AL +++ Sbjct: 64 PYAQQLAVPIDRALREVEQALAMSKGFDPASSDREFRMHLTDFAQVAFLPALLERLRALA 123 Query: 124 PQATIKLRNWDYDS-LDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCV 182 P+ I++ ++ L A+ G +D F + + + LF D V Sbjct: 124 PRVVIRVEALAEETILPALDEGRLDFAFG---------RMSKAAGQGVGRYTLFKDRYAV 174 Query: 183 WLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 +R HP + F IC A+++VL ++G IA+ LP F Sbjct: 175 LMRAGHPLAGHALSRKDFAAAGQALICTSG--HRAIEDVLVKMGA--HIALRLPSFLVVS 230 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 + D L++ R + ALP+ +L W + S +P Sbjct: 231 RIVETSD-LMVIVPARLAEQCAATGLFHTAALPVAMPA-------FDVSLFWSESRSADP 282 Query: 303 KIVWLRETIKNLYAS 317 W+R ++ L+ Sbjct: 283 AHAWMRGQLQQLFGQ 297 >UniRef50_Q46MT9 Regulatory protein, LysR:LysR, substrate-binding n=1 Tax=Ralstonia eutropha JMP134 RepID=Q46MT9_RALEJ Length = 334 Score = 258 bits (660), Expect = 2e-67, Method: Composition-based stats. Identities = 68/319 (21%), Positives = 119/319 (37%), Gaps = 21/319 (6%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 LDLN L+ L L+ RSV KAA+R+ ++ A S SLA+LR +F+D L V Sbjct: 1 MRFNKLDLNQLVVLDALLSTRSVGKAAERLFLSQPATSCSLARLREYFEDDLLVAVGKTQ 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPR--GLKFELAAESPLMMIMLNALSKQIY 120 TPL + + + + + + + P +F + + ++ + L+ + ++ Sbjct: 61 VLTPLALGLRKPVRDVLLQIQTITRARPSFDPATSTRRFIIESSDYVISVFLSQVIRRAA 120 Query: 121 QRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 + P LR + + + GE ++ + ++ E LF D Sbjct: 121 EAAPLMQFDLRAISPQTPEHLESGEAELLIAPEF----------AMVPGHPSEPLFEDTF 170 Query: 181 CVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRE-RTIAMSLPEFE 239 + D ++T+ HI + W D+ L G+ R + P F Sbjct: 171 SCLVSADSTVGQDGLTVETYFDAAHIGVEWGGGRRVTFDSRLIATGKRTRRQDVIAPSFT 230 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 + + D + R + Q L V P+ L W K Sbjct: 231 LVPALLSGTDRIA-TLPTRLAEQMAQRFGLRRVTCPIDLPA-------FSEHLQWQKYQE 282 Query: 300 HNPKIVWLRETIKNLYASM 318 +P IVWLRE ++ M Sbjct: 283 SDPAIVWLRELLRETAREM 301 >UniRef50_B7QWJ8 Transcriptional regulator, LysR family n=1 Tax=Ruegeria sp. R11 RepID=B7QWJ8_9RHOB Length = 320 Score = 258 bits (660), Expect = 2e-67, Method: Composition-based stats. Identities = 76/324 (23%), Positives = 133/324 (41%), Gaps = 26/324 (8%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 + TLDLNLL L + E S KA +R+ ++ SAVS +L++LR +DPLFV L Sbjct: 1 MNFATLDLNLLRVLDAVFAEGSTVKAGRRLGLSQSAVSGALSRLRHALNDPLFVRQGNQL 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGLK--FELAAESPLMMIMLNALSKQIY 120 T S+ +L + LL P H P F ++A +++ L + Sbjct: 61 VATEFAESLRHDLRAELDRLETLLSPPSHFDPATASGLFRISAADFFCDMLMPRLGDLLS 120 Query: 121 QRYPQATIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 ++ P +L + ++++ R + D+ + LP + E LF Sbjct: 121 RKAPGIRAQLLDLVPRHHVESLERQQADLALLPD----------TDLPDWMMREPLFRSE 170 Query: 180 PCVWLRKDHPAL-----HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMS 234 V R+ +PA + D F PH+ T D L ++GR R + M+ Sbjct: 171 YAVLARRGNPATKDLRHGERMPFDLFCSLPHVLFAPHGDLTAQSDEALAKVGRRRRVVMT 230 Query: 235 LPEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLW 294 +P F + ++ D + L + + ++ L L P+ D Q +W Sbjct: 231 VPVFSGVCRVVSESDLIGLLPL-QLARKVQPVYGLDLFVPPIAIDPIQLIG-------VW 282 Query: 295 HKRNSHNPKIVWLRETIKNLYASM 318 H++ P W+R+ I ++ + Sbjct: 283 HRKADTAPMAAWMRQQIFDILRPL 306 >UniRef50_C7RD08 Transcriptional regulator, LysR family n=1 Tax=Kangiella koreensis DSM 16069 RepID=C7RD08_KANKD Length = 319 Score = 258 bits (660), Expect = 2e-67, Method: Composition-based stats. Identities = 61/314 (19%), Positives = 131/314 (41%), Gaps = 18/314 (5%) Query: 4 SITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLS 63 +I +LD+NLL+ L +L++E+ ++ AA R++++ AVS+SL +LR +DPL + G Sbjct: 7 NIRSLDMNLLVLLDVLLEEKHISNAADRLHMSQPAVSRSLQRLRDMLNDPLLIRVGNGYQ 66 Query: 64 PTPLMVSMEQNLAEWMQMSNLLLDKP-HHQTPRGLKFELAAESPLMMIMLNALSKQIYQR 122 T + ++ L W+ ++ + + + M + + L + + + Sbjct: 67 LTDKALELQPKLKSWLADFMCMMQPEKFEPAKAKGEISIMSMDLEMSLFMPNLWQDLQVQ 126 Query: 123 YPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCV 182 P ++ N D + + +G++D S + S + + L + Sbjct: 127 APNVALRSFNIRPDGISLLEQGDIDFLVSEEDKSLESTK--------YHHYHLIQHEFVL 178 Query: 183 WLRKDHPALHQ-TWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQS 241 + K H Q +D +L+ H + +D L++ G R IA+ +P F + Sbjct: 179 VMSKQHRLAKQKAIGMDEYLKQRHGLVTVTGKGKPFIDRTLEKQGLSRNIALYVPTFHLA 238 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 L + ++ D L+ + + + + + + +PL + L WH+R Sbjct: 239 LDICSRTD-LMFSMPRLVAEKEGERYGVVMKEMPLKLPL-------LDIYLYWHERQHQT 290 Query: 302 PKIVWLRETIKNLY 315 W R ++ + Sbjct: 291 ALHKWFRTLMRESF 304 >UniRef50_Q5E7C7 Transcriptional regulator, LysR family n=5 Tax=Vibrionaceae RepID=Q5E7C7_VIBF1 Length = 330 Score = 258 bits (659), Expect = 2e-67, Method: Composition-based stats. Identities = 62/315 (19%), Positives = 116/315 (36%), Gaps = 21/315 (6%) Query: 4 SITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLS 63 + +DLNLL+ LM+ +SV+ AA ++ V SA+S SL++LR DPLF + Sbjct: 25 NWKAVDLNLLVAFSTLMETKSVSLAANKLFVGQSAMSHSLSRLRELLHDPLFERQGHQMI 84 Query: 64 PTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPR--GLKFELAAESPLMMIMLNALSKQIYQ 121 PT + + + + +Q + + K F++ ++ + I+Q Sbjct: 85 PTAKAIQLYPLVNKVLQTISGDILKVDTFEASEFTGTFKIGMTDYAELLFAADIFDAIHQ 144 Query: 122 RYPQATIKLRNWDYDSLDA-ITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 P A + D + +D+ + Y+ L+++ Sbjct: 145 LAPNAQLCFTTVDKANYQDRFDSEPLDLVIGSMKPEL----------KEFQYQTLYTEKH 194 Query: 181 CVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQ 240 LD ++ PH + + + +D L+ LG R+++++ F Sbjct: 195 VCMWDGQRHLFSSPITLDDYISLPHALVSPDGALKTGVDKELKALGVGRSVSVASKHFLT 254 Query: 241 SLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 + + D L+ P L L + L E E L+W RN Sbjct: 255 IRHLMKKRD--LICVVPELMAQ------LDLFSEKLVHSEPPINVGEFDIQLIWQTRNKE 306 Query: 301 NPKIVWLRETIKNLY 315 N + WL+E + Sbjct: 307 NKRYQWLKELLIQTI 321 >UniRef50_A1U796 Transcriptional regulator, LysR family n=3 Tax=Marinobacter RepID=A1U796_MARAV Length = 303 Score = 258 bits (659), Expect = 2e-67, Method: Composition-based stats. Identities = 74/320 (23%), Positives = 129/320 (40%), Gaps = 24/320 (7%) Query: 1 MKK-SITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSP 59 MK + +LDL L ++ E SV++AA R+ VT SAVS +L +LR F DPLFV S Sbjct: 1 MKPVDMLSLDLRSLATFVAVLDEGSVSRAAVRLGVTQSAVSHTLERLRQAFGDPLFVKSG 60 Query: 60 LGLSPTPLMVSMEQNLAEWMQMSNLL-LDKPHHQTPRGLKFELAAESPLMMIMLNALSKQ 118 G+ PT + ++ + + L P F +AA ++L L + Sbjct: 61 RGIVPTDYALRTGPHIRQLLDDLRTLPSGPPFEPASAEFTFTIAANDYQRDLLLPGLLRI 120 Query: 119 IYQRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSD 178 + Q+ P +++ + D + + D+ S I L +D Sbjct: 121 LRQQAPGIRLQVIPSGIPNADMLRKEACDLIISPHAPET----------TDIMQRGLMAD 170 Query: 179 VPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEF 238 V+ + + +L +L+ HI++ + + +N L G +R +++ F Sbjct: 171 RMVVFYDPNQ--RNAPTDLAEYLKADHIALMFATGERPGFENTLHAKGLDRRNVVTVANF 228 Query: 239 EQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRN 298 D L A Q +PLPFD +LWH+R+ Sbjct: 229 SGLPEFLRGTDMLATAPERMSAQLMR-----DFAWVPLPFD-----YKPFTLLMLWHRRH 278 Query: 299 SHNPKIVWLRETIKNLYASM 318 ++P W+R + ++ A+M Sbjct: 279 QNDPAHRWVRNQVNSVAATM 298 >UniRef50_D2YJX0 Transcriptional regulator, LysR family n=1 Tax=Vibrio mimicus VM573 RepID=D2YJX0_VIBMI Length = 314 Score = 258 bits (659), Expect = 3e-67, Method: Composition-based stats. Identities = 70/318 (22%), Positives = 132/318 (41%), Gaps = 23/318 (7%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 + DLNLL +M SV KAA ++N+T +AVS++L++LR +PLF+ GL P Sbjct: 15 LRDYDLNLLTVFDAVMTLGSVNKAADKLNMTSAAVSQNLSRLRDQVGEPLFIRQGRGLQP 74 Query: 65 TPLMVSMEQNLAEWMQMSNLLLDKPHHQTPR--GLKFELAAESPLMMIMLNALSKQIYQR 122 T ++M ++++ + L+ P +F + +++L L ++I + Sbjct: 75 TQYALNMHKHVSAGLSAIRFGLETNACFDPATSTREFVIGGHGYFDLVVLPQLLRKISEV 134 Query: 123 YPQATIKLRNWDYDSL---DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 P T+ L+ ++ D ++ E D+ + L +I + + Sbjct: 135 APHITVNLKPYEDDHFTPSQVLSEREADLFLAS----------LPISHPSIITTQIAEEA 184 Query: 180 PCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFE 239 V K+HP L +T F H ++ + + ++L + R + Sbjct: 185 LVVVYAKNHPRLGETLTFQQFFDEKHTALTSRRFGHYLFSSLLDQALPARKVHYQSDSML 244 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 + A+ D LL T R + + L + LP VP + WHK Sbjct: 245 NLMATASVTD-LLCFTPKRLADMWAEKLGLHIQPLPFEM-------RPVPTFMCWHKAKQ 296 Query: 300 HNPKIVWLRETIKNLYAS 317 + ++WLRE I+ +++ Sbjct: 297 QDKGLIWLREQIEEVFSQ 314 >UniRef50_A4SH82 Transcriptional regulator, LysR family n=2 Tax=Aeromonas RepID=A4SH82_AERS4 Length = 324 Score = 258 bits (659), Expect = 3e-67, Method: Composition-based stats. Identities = 70/318 (22%), Positives = 132/318 (41%), Gaps = 21/318 (6%) Query: 1 MKKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPL 60 M+ ++ LDLNLL +LMQER+VT+AA+R++++ S VS +L +LR DDPLFV S Sbjct: 1 MELPLSRLDLNLLTVFDMLMQERNVTRAAERLHLSQSTVSHALGRLRQALDDPLFVMSRR 60 Query: 61 GLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGLK--FELAAESPLMMIMLNALSKQ 118 + PT ++ + + + M L + P + F +A + ++ AL +Q Sbjct: 61 EMMPTERAKTLAGPVRQALAMLEQGLRQAEGFDPASARRIFRIATPGSVEHGLVPALVEQ 120 Query: 119 IYQRYPQATIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFS 177 ++++ P +++ D D + +GE+D+ +++ + E F+ Sbjct: 121 LHRQAPHCRLEVCELADSDYERELEKGELDLVIGFADAN--------HFSPRLWREPWFN 172 Query: 178 DVPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPE 237 + L + + PHI +D L G ER + + LP Sbjct: 173 NPLVCLSPLGS-ELPEVLGPAELVSRPHIHTSSWGHSQAMVDLWLARFGVERELGVRLPS 231 Query: 238 FEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKR 297 F + A L+ +++ + + L L L + + + H Sbjct: 232 FMAVPPLMA-TGRYLVVVPEMIGRHFCRYYPLRLHQLNPEIP--------IVYLMAGHPL 282 Query: 298 NSHNPKIVWLRETIKNLY 315 +H+ I W + + L Sbjct: 283 TAHDQAIGWFKGLLHRLA 300 >UniRef50_D1P3H6 Transcriptional regulator, LysR family n=1 Tax=Providencia rustigianii DSM 4541 RepID=D1P3H6_9ENTR Length = 303 Score = 258 bits (659), Expect = 3e-67, Method: Composition-based stats. Identities = 75/315 (23%), Positives = 132/315 (41%), Gaps = 27/315 (8%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 IT +DL L + L++ER+VT+AA ++ +T AVS L+KLR F D LF+ S GL P Sbjct: 4 ITRIDLKQLRVFKALLKERNVTRAAAQMGLTQQAVSAQLSKLRDTFQDHLFLRSAQGLIP 63 Query: 65 TPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQIYQR 122 TPL +E + + L P P F ++A + ++L L ++ + Sbjct: 64 TPLAEQLEPRVNTVFESI-AALSPPDRFDPAEVYTTFVISATDYAVAVILPRLMAKVRTQ 122 Query: 123 YPQATIKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPC 181 P + +R+++ D L +T G++D+ + + +P + LFS+ Sbjct: 123 APGLKLIIRDFESDRLYPLLTSGDLDLALTFP----------AFVPDGCQTKWLFSEHHI 172 Query: 182 VWLRKDHPALHQTWNLDTFLRYPHISICWEQSDT-WALDNVLQELGRERTIAMSLPEFEQ 240 R D P +Q + + P I + +++ + D+ G R I MS+P F Sbjct: 173 CVTRSDSPMQNQQFTISDIADLPQIIVSPTRANLIGSADDWFASKGYSRNIVMSVPSFAA 232 Query: 241 SLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 + A D +A P + + L P WH R++ Sbjct: 233 APACIASTDC--IAFLPSRILPNPLVRPIQLDDSP----------PSFDVIAAWHLRSNQ 280 Query: 301 NPKIVWLRETIKNLY 315 +P W+ ++ + Sbjct: 281 DPLHKWILSLLQQEF 295 >UniRef50_A8GZD3 Transcriptional regulator, LysR family n=22 Tax=Gammaproteobacteria RepID=A8GZD3_SHEPA Length = 335 Score = 257 bits (658), Expect = 3e-67, Method: Composition-based stats. Identities = 85/295 (28%), Positives = 145/295 (49%), Gaps = 9/295 (3%) Query: 23 RSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSMEQNLAEWMQMS 82 +SVT AA R++++ SAVSK L+KLR FDD LF + GL TP + + L E +Q Sbjct: 44 QSVTSAATRLHLSQSAVSKQLSKLRETFDDQLFERTAYGLKATPRALQLAPELREVLQKL 103 Query: 83 NLLLDKP-HHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQATIKLRNWDYDSLDAI 141 + +F + + ++ ++ PQ +I W + S++ + Sbjct: 104 DQFTRPSTFEPAESQRRFRMHIVETAYSLTYPYFMPKLLKQAPQVSINGHTWSHSSMEQL 163 Query: 142 TRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPALHQTWNLDTFL 201 R E+D+G RE RS +++LP + L D P LR+DHPAL + WN+DTFL Sbjct: 164 LRCEIDMGIICREWDKRSLLHMNNLPEELGAAELIRDYPVCLLRRDHPALKEPWNIDTFL 223 Query: 202 RYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQPDNLLLATAPRYCQ 261 +Y H+ + + + W LD+VL+ +R +A+++ +F ++ + D +L A +Y Q Sbjct: 224 KYRHLQVAFGGLEHWLLDDVLRLDHLQRDVAVNMTDFNCAMDLCENSDLILCA-PRKYIQ 282 Query: 262 YYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWLRETIKNLYA 316 + L + +P+ + + L+WHK + +P WLR I + Sbjct: 283 QMMVNYDLVCLDVPVHVE-------PGAYVLVWHKHFNLDPSHSWLRNLIIDGVR 330 >UniRef50_B4RWU1 Transcriptional regulator n=2 Tax=Alteromonas macleodii RepID=B4RWU1_ALTMD Length = 347 Score = 257 bits (658), Expect = 3e-67, Method: Composition-based stats. Identities = 65/306 (21%), Positives = 125/306 (40%), Gaps = 22/306 (7%) Query: 15 CLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSMEQN 74 +M E ++T+AA R+++T AVS +L+++R ++D LFV G+ PT ++ Sbjct: 2 IFDAIMTEGAITRAADRLSMTQPAVSNALSRMRTAWNDELFVKDGRGIQPTSFAKNLWSQ 61 Query: 75 LAEWMQMSNLLLDKP-HHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQATIKLRN- 132 + + + ++ + F +AA ++ ++ L K I P I Sbjct: 62 IQGPLGELEVAVNPTDFNPASAKRTFRIAATDNIVSMVWGPLRKVIENEAPGINIHAIPN 121 Query: 133 WDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPALH 192 +D ++ + E ++ FS + I E + V +R DHP Sbjct: 122 YDMETDKILKDAEAELTFSKYQEPGSV----------IRAEHVLDPSWVVVMRPDHPLAK 171 Query: 193 QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQPDNLL 252 +L+ F+ H+ + + D VL LG R +AMS+ +F + + + + L Sbjct: 172 SQLSLEDFVAADHLLVSVTGDVSGPTDQVLANLGLRRRVAMSVNQFHNATPLLKESN--L 229 Query: 253 LATAPRYC-QYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWLRETI 311 + AP + +L + P+ S P +++WHKR + + WLR + Sbjct: 230 ICVAPSLVMEKEIFSGELAVFETPIEIVSS-------PLSVMWHKRQDQDAGLQWLRGLV 282 Query: 312 KNLYAS 317 Sbjct: 283 VKFIRE 288 >UniRef50_Q88LJ0 Transcriptional regulator, LysR family n=1 Tax=Pseudomonas putida KT2440 RepID=Q88LJ0_PSEPK Length = 320 Score = 257 bits (658), Expect = 4e-67, Method: Composition-based stats. Identities = 56/297 (18%), Positives = 130/297 (43%), Gaps = 21/297 (7%) Query: 20 MQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSMEQNLAEWM 79 +E++++ AA+R+ ++ S SL +LR +F+D LF+++ G+ PTP VS+ +++ + Sbjct: 18 YREQNLSAAARRLGMSQPMASASLRRLREYFEDQLFLSTGRGMRPTPFTVSIAASVSGVL 77 Query: 80 QMS--NLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQATIKLRNWDYDS 137 + +L F ++ +I + + +++ + P ++ + + Sbjct: 78 ERIKHEILAKPAFQPRQSDRLFTISTSDIGALIFVPPILRRLGEDAPNTDLRCVSLPHQQ 137 Query: 138 LDA-ITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPALHQTWN 196 L+ + +G VD+ + + + LF +R++HP++ T + Sbjct: 138 LEQALEQGSVDLAVGYFPDLQGEQ---------VKTQALFEHNFTCIVRRNHPSIGDTLS 188 Query: 197 LDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQPDNLLLATA 256 L+ FL H+ + E + L+EL +R + + +P F + A + ++AT Sbjct: 189 LEQFLAADHLVVNQEGRSQEIFEQRLRELKLQRRVHLEVPHFMSVPQLIASTN--MVATV 246 Query: 257 PRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWLRETIKN 313 P + Q+ ++ P+ ++ L WH++ +P + W R + Sbjct: 247 PLSLGVWFASEQIKMLTPPIEVEK-------FELKLHWHRQMEDDPAVSWFRNAVFE 296 >UniRef50_Q399F7 Transcriptional regulator, LysR family n=1 Tax=Burkholderia sp. 383 RepID=Q399F7_BURS3 Length = 313 Score = 257 bits (658), Expect = 4e-67, Method: Composition-based stats. Identities = 65/317 (20%), Positives = 122/317 (38%), Gaps = 24/317 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +D +LL L L+ E SV++ A+ + + +S +L +LRA DPL V S + PT Sbjct: 6 IDAHLLKILHTLITESSVSRTAELLGQSQPTISVALRRLRAITGDPLLVRSGSRMVPTSH 65 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQIYQRYPQ 125 +++ + L + + +L+ P F + + L + L A+ P Sbjct: 66 AMTLVEPLDQALAGIAAVLNPASTFDPATTHRTFRIGSPDYLDVFFLPAIVDAFKHEAPG 125 Query: 126 ATIKLRNW---DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCV 182 A I+ ++ D A+ G +D+ S+ P + + L D Sbjct: 126 ARIEFQHLMTVDGGYEHALESGSLDLAVGNW----------STPPQQLHLQPLCRDDLVC 175 Query: 183 WLRKDHPALHQTWNLDTFLRYPHISI-CWEQSDTWALDNVLQELGRERTIAMSLPEFEQS 241 +R DH D + H+ + + +D L G R + ++P F + Sbjct: 176 VMRDDHRIRRGQLTADVYREADHLGVTTHHATGLGTIDRELARGGLSRNVTTTMPYFGMA 235 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 ++ + + LL T ++ L LPL + + + + LWH R + Sbjct: 236 PYVLMRSN-LLFTTTRTLATHFCSL-------LPLRIEPIPCEPQALTYYQLWHDRTHRS 287 Query: 302 PKIVWLRETIKNLYASM 318 VWLR + + + Sbjct: 288 AAAVWLRRLVSGVAKKL 304 >UniRef50_P52679 PCP degradation transcriptional activation protein n=1 Tax=Sphingobium chlorophenolicum RepID=PCPR_SPHCR Length = 307 Score = 257 bits (658), Expect = 4e-67, Method: Composition-based stats. Identities = 76/317 (23%), Positives = 129/317 (40%), Gaps = 23/317 (7%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 + + L L L+ L + S KAA +++ +S+ LA+LR FDDPLFV + G+ Sbjct: 1 MNDSVLPLGHLMVFDALYRHGSAGKAAHALSMPQPTLSRWLAQLRTHFDDPLFVRTRSGM 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTP--RGLKFELAAESPLMMIMLNALSKQIY 120 PTPL ++AE + + + P F +AA +ML L + Sbjct: 61 EPTPLAARAAPHIAEMIAIYRQHVRSELRFDPGTSNRNFRIAASDFGQALMLPRLYATLE 120 Query: 121 QRYPQATIKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 + PQ + N + L + + G +DI F G +L I + LF + Sbjct: 121 ETAPQVRVTGVNLRHGPLVEELESGSIDIAFGG----------FPTLSAGIKTQTLFREE 170 Query: 180 PCVWLRKDHPALHQTWNLDTFLRYPHISICWE--QSDTWALDNVLQELGRERTIAMSLPE 237 +R+ HPAL +L+ F + HI + ++ L EL +I + Sbjct: 171 YVCVMRQSHPALTHGLDLEAFRQCRHIIVTAHEFNHVHEQVEARLLELLPPESIRFTTEN 230 Query: 238 FEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKR 297 F S +A + D +L R +++ L + +P+ + WH+R Sbjct: 231 FLVSAVIAEETDVIL-TIPSRLARWFANRGGLTIFPVPIELP-------SIEVKQYWHER 282 Query: 298 NSHNPKIVWLRETIKNL 314 +P +WLR I + Sbjct: 283 YDKDPGNIWLRRVIAKI 299 >UniRef50_Q7D3I0 Transcriptional regulator, LysR family n=1 Tax=Agrobacterium tumefaciens str. C58 RepID=Q7D3I0_AGRT5 Length = 316 Score = 257 bits (657), Expect = 5e-67, Method: Composition-based stats. Identities = 57/328 (17%), Positives = 131/328 (39%), Gaps = 33/328 (10%) Query: 2 KKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLG 61 + + ++DLNLL + L+ + ++T A + I ++ A+S +L ++RA D LF + G Sbjct: 3 RFQLGSVDLNLLKVIYALVVKGNMTAAGEYIGLSQPAMSHALKRVRAITGDELFKKTSRG 62 Query: 62 LSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQI 119 T + + ++ + ++ + P F + ++++ L +++ Sbjct: 63 FVMTRFCTEIFPAVRRIIEDTETVMLQRLAFDPATSHRAFRIGMNDYFSVVLMPRLVERV 122 Query: 120 YQRYPQATIKLRNWDYDSL-----------DAITRGEVDIGFSGRESHPRSRELLSSLPL 168 +++ + + + + G +D+ E + P Sbjct: 123 RSEAEHCVLEVIHMPRTGISHNRDFMPVVQEHLNEGTIDVAVMTAE----------NFPA 172 Query: 169 AIDYEVLFSDVPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRE 228 LF++ + ++PA + LD L H+ + S +D L +G E Sbjct: 173 RYRCASLFTERRVCIMSANNPAAKEPLTLDALLSLGHVKVTSSPSRRGWIDERLDAMGLE 232 Query: 229 RTIAMSLPEFEQSLFMAAQPDNLLLATAP-RYCQYYNQLHQLPLVALPLPFDESQQKKLE 287 R + +P F ++ + ++ D L+A P + + + H+L L+ P ++ Sbjct: 233 RRVVAVVPHFSAAVAIVSRSD--LVAMMPESVAKLFERSHELLLLESPFEEEKQST---- 286 Query: 288 VPFTLLWHKRNSHNPKIVWLRETIKNLY 315 +++W +P +WLRE I + Sbjct: 287 ---SMIWLAEKERDPASLWLREQISACF 311 >UniRef50_B4E7M9 LysR family regulatory protein n=1 Tax=Burkholderia cenocepacia J2315 RepID=B4E7M9_BURCJ Length = 299 Score = 257 bits (657), Expect = 5e-67, Method: Composition-based stats. Identities = 75/316 (23%), Positives = 131/316 (41%), Gaps = 26/316 (8%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNS--PLGL 62 + D+ LL+ L +L++E +VT+AA+R+ ++ A+S LA+LR DDPL V + G+ Sbjct: 1 MKKHDMGLLVSLDVLLEEANVTRAARRLAISQPALSAQLARLRQVLDDPLLVPAERGRGM 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQIY 120 TP ++ L E + L++ P+ P F +A M + L + I Sbjct: 61 RLTPRAAQLKSPLHELLTRLEDLVEAPYAFDPSTAKRDFTIALNDNAAMTIGLDLIECIR 120 Query: 121 QR-YPQATIKLRNWDYDSLDAIT-RGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSD 178 ++ Y + + D + + RG +D+ R + +P + L D Sbjct: 121 KQSYAGIRLAMLQIPRDEVLDLAARGRIDLVIGTR----------AFMPPGLRTHDLVYD 170 Query: 179 VPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEF 238 V RK HP L+ + Y H+ + S +D+ L ELG R +S+ + Sbjct: 171 RFQVAQRKGHPRGTAAMTLEQYCAYEHVLVSTNGSYHSGIDDFLAELGHYRHTTVSVQYY 230 Query: 239 EQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRN 298 + + + L R+ ++ H + LP FD Q + WH R Sbjct: 231 TAVPPILERTNCLA-TLPERFLHRFD--HMIDRFDLPFAFDPFQLQVG-------WHPRF 280 Query: 299 SHNPKIVWLRETIKNL 314 + WLRE + + Sbjct: 281 DEDLGHQWLREQLIAV 296 >UniRef50_A1R1P0 Putative transcriptional regulator, LysR family n=1 Tax=Arthrobacter aurescens TC1 RepID=A1R1P0_ARTAT Length = 314 Score = 256 bits (656), Expect = 5e-67, Method: Composition-based stats. Identities = 69/318 (21%), Positives = 135/318 (42%), Gaps = 23/318 (7%) Query: 2 KKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLG 61 + ++ +DLNLL+ +LMQER VT+AA ++++T AVS +L +LR FDDPLF S G Sbjct: 6 ETNLRKIDLNLLVVFHVLMQERHVTRAAAKLHITQGAVSAALGRLRLLFDDPLFQKSRTG 65 Query: 62 LSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQI 119 + PT +++ + + ++ + L+ + P F +A L + + + + Sbjct: 66 MVPTAKALALAPRIGQSLKTVSDLVFQDEQFEPTTSNRTFHIAMSDDLEAVFVPKIVTEA 125 Query: 120 YQRYPQATIKLRNWDYDS-LDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSD 178 + + +A+ +D+ +P A + VLF+ Sbjct: 126 IRSNWNVKFSFHQTNSVLWQEALDDPRMDLVMCATP---------PQVPAAYHHSVLFAS 176 Query: 179 VPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEF 238 L + +L+ + H+ + ++ + +D +L+ G ER S+ F Sbjct: 177 SYTCLYDGQRMKLSEPLSLEDYAGSGHLRVSYD-AQRGFVDEILESQGYERKAVASISHF 235 Query: 239 EQSLFMAAQPDNLLLATAPRY-CQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKR 297 ++ + D L+AT P Y + ++ L + P+P +L+W Sbjct: 236 AGAVAVLRAAD--LIATIPTYTAKAFSDAAGLTMSQPPVPMP-------RFTISLIWEVP 286 Query: 298 NSHNPKIVWLRETIKNLY 315 P+ VWLR+ ++ Sbjct: 287 KETQPEHVWLRKMMQACA 304 >UniRef50_C6XR04 Transcriptional regulator, LysR family n=1 Tax=Hirschia baltica ATCC 49814 RepID=C6XR04_HIRBI Length = 302 Score = 256 bits (656), Expect = 7e-67, Method: Composition-based stats. Identities = 69/312 (22%), Positives = 124/312 (39%), Gaps = 26/312 (8%) Query: 6 TTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPT 65 LDLNLL + + +E+++T+AA ++++PSAVS +L +LRA +DPLFV + PT Sbjct: 9 DRLDLNLLKVFEAVYREQNLTRAANLLSLSPSAVSHALRRLRAHLNDPLFVKEGRIMRPT 68 Query: 66 PLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGLK--FELAAESPLMMIMLNALSKQIYQRY 123 P+ M +L + + LL P K F + + ++ ++I Q Sbjct: 69 PVCARMAPDLLDEIDRLRALLQSWGKFDPAQSKIVFTIGMPDAMEIVFFPEFVEKIRQLA 128 Query: 124 PQATIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCV 182 P I +D + + +++ +DI + + L +D Sbjct: 129 PNVRIISARYDRNEMVASLSGHTLDICVDIALPT----------SKQLRHHPLTADDW-C 177 Query: 183 WLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 + K H +L HI++ T D+ L++ G R + + + +L Sbjct: 178 IVSKTHTIQ----TAADYLAQEHIAVSARTVGTVLEDSALEQRGIFRDVRVRCQNYLSAL 233 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 + + D +L R Q Q L + +P + L WH N + Sbjct: 234 AIVERSDRIL-TMPKRLAQSMIQSRPLKIQDVPFSMP-------PIELNLYWHSDNEADS 285 Query: 303 KIVWLRETIKNL 314 WLRE + + Sbjct: 286 ANKWLREIVIDT 297 >UniRef50_A7K354 LysR substrate binding domain protein n=17 Tax=Gammaproteobacteria RepID=A7K354_VIBSE Length = 314 Score = 255 bits (653), Expect = 1e-66, Method: Composition-based stats. Identities = 65/317 (20%), Positives = 114/317 (35%), Gaps = 21/317 (6%) Query: 4 SITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLS 63 +DLNLL+ L + RSV+ AA++ V+ SA+S SL++LR FDDPLF + Sbjct: 14 QWRNIDLNLLVTFSYLYRYRSVSVAAEKSYVSQSAMSHSLSRLRLLFDDPLFERKGHKME 73 Query: 64 PTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKF--ELAAESPLMMIMLNALSKQIYQ 121 PT + + + L P + I L +I Q Sbjct: 74 PTEHAHHIAPTVHHLLDSIAKDLLTKSAFQPENYAGICRIGLTDYAEFIFAPRLYDEIRQ 133 Query: 122 RYPQATIKLRNWDYDSLDAI-TRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 R P+A I N + + A+ ++D+ + L + L+++ Sbjct: 134 RAPEAQISFINVNRSNYVALTEHEKLDVIIGS----------MPVLDDNFESLYLYTEKH 183 Query: 181 CVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQ 240 K +L+ F + + S +D L E G R + ++ F Sbjct: 184 VCMCDKQVLKGETQLSLEAFANIEQALVSPDGSLKTQVDQKLAEHGLSRKVTVASRNFLT 243 Query: 241 SLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 + + D + + + L V P+ + +LWH ++ Sbjct: 244 IRHLLKKRDLIAIV-PEKMALAEGFSDDLITVNPPIAV-------ADFDIAMLWHSSRNN 295 Query: 301 NPKIVWLRETIKNLYAS 317 K +WLRE + + S Sbjct: 296 EDKGIWLRELVSSTITS 312 >UniRef50_Q2SHJ0 Transcriptional regulator n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SHJ0_HAHCH Length = 291 Score = 255 bits (653), Expect = 1e-66, Method: Composition-based stats. Identities = 69/315 (21%), Positives = 134/315 (42%), Gaps = 30/315 (9%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 ++ +DLNLL+ L L+ ER VT+AAKR++++ A S +L + R F DPL + + Sbjct: 1 MNLRGVDLNLLVILDALLDERHVTRAAKRLHLSQPATSSALERCRHLFGDPLLIRGRGEM 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQ-TPRGLKFELAAESPLMMIMLNALSKQIYQ 121 + S+ + + + + ++++ + + +L L +++ Sbjct: 61 RLSAKAESLREPIKALLTQAERVINQADTPLAELRQTIRILMADFPVSALLGPLHQRLIT 120 Query: 122 RYPQATIKLRNWD--YDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 P + ++ W +L+ + +GE D+ S + ++ + L + Sbjct: 121 SAPNLDLIVQPWHGAKSALEQLAKGEADLAVS----------VFPNVGASFRCVELLYED 170 Query: 180 PCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFE 239 CV +RKDHPA Q +NL +L YPH+ + +D LQ G R + + +P F+ Sbjct: 171 YCVLMRKDHPAA-QNFNLQQWLAYPHVLVSGRGDADSPVDQTLQARGLRRRVGLVVPYFQ 229 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 + L+A P +C + + P+P + P L WH R Sbjct: 230 MAPD--------LIALLPTHC-VPQDTTKFTVFPPPIPVE-------GFPLHLAWHVRKH 273 Query: 300 HNPKIVWLRETIKNL 314 + + + E I+ + Sbjct: 274 GDQAVSHVVEVIREV 288 >UniRef50_B8ERS8 Transcriptional regulator, LysR family n=1 Tax=Methylocella silvestris BL2 RepID=B8ERS8_METSB Length = 323 Score = 255 bits (652), Expect = 2e-66, Method: Composition-based stats. Identities = 73/333 (21%), Positives = 137/333 (41%), Gaps = 39/333 (11%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 I T+DLNLL + +M+ RSV +A++ + VT SAVS +L++LR D LF++ G+ P Sbjct: 4 IRTIDLNLLRVFEAVMRHRSVIRASRELGVTASAVSHALSRLRQALGDELFISGEAGMEP 63 Query: 65 TPLMVSMEQNLAEWMQMSNLLLD-KPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRY 123 T + +E + + ++ + + +P T F +AA + + +L L ++ + Sbjct: 64 TARALELEPAIRDGLERIDHAVGAQPFVPTDAFRTFRIAATDYVAVAILPQLVGRLAEVA 123 Query: 124 PQATIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCV 182 PQ +++ ++ D + + G +D LP + + + + Sbjct: 124 PQIDLRIFPFNRTDVVRHLDEGRIDFVMG----------WFGDLPDRMRRATIVVEKEAM 173 Query: 183 WLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRER------------- 229 +R HP + +PHI + ++ A+D + G R Sbjct: 174 VVRTGHPLTEGPLTKERLFSFPHIVVELIGTEEAAVDGFFDDRGVWRRVWIERLLIEADA 233 Query: 230 ------TIAMSLPEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQ 283 +A+S+P + M D ++AT P LV L LP++ Sbjct: 234 DQGEVGRVAVSVPHYAAVPPMVRVSD--MVATLPSALARAAVEQG-SLVMLDLPYEP--- 287 Query: 284 KKLEVPFTLLWHKRNSHNPKIVWLRETIKNLYA 316 L VP ++WH+R + WL + + Sbjct: 288 --LAVPVEMVWHQRTERDEGSQWLLGELISAVK 318 >UniRef50_Q7MC61 Transcriptional regulator n=9 Tax=Gammaproteobacteria RepID=Q7MC61_VIBVY Length = 313 Score = 255 bits (652), Expect = 2e-66, Method: Composition-based stats. Identities = 67/316 (21%), Positives = 129/316 (40%), Gaps = 23/316 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +DLNLL ++M+ RSV +AA+ + +T AVS +L +LR + DPLF+ G++PT Sbjct: 15 MDLNLLKTFDVVMKTRSVNEAAETLGITAPAVSHALNRLRDQYQDPLFIRQGRGITPTNF 74 Query: 68 MVSMEQNLAEWMQMSNLLL--DKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQ 125 + + + E + + + + F L++ + +++L L + Q P Sbjct: 75 AIELHAEIQEPLSLLLNGAKSRQQFNPDTSHRTFRLSSHKDIDLMLLPPLMDHLAQHAPN 134 Query: 126 ATI--KLRNWDYDSLD-AITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCV 182 + + + D + +VD+ + E+LF + Sbjct: 135 VKLCADVEHLDERDRQADLRTRKVDMILATVPFDEH----------GYHNELLFELPLVM 184 Query: 183 WLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 R+DHP + T F H+ ++ + +D++ E +R IA ++ Sbjct: 185 VCRQDHPRIQNTITHQQFFAEQHLLWETKRQNQDIVDSLALEPQPQRNIAYKTGSSCNAI 244 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 MAAQ D + + T + + HQL ++ LP ++P + WH + Sbjct: 245 MMAAQTDWICV-TGQWHADLMAKAHQLQVMPLPFKL-------NKLPIYMTWHHSQQQDS 296 Query: 303 KIVWLRETIKNLYASM 318 WL+ + A+ Sbjct: 297 GHQWLKSALMQATATF 312 >UniRef50_B1MJW3 Putative transcriptional regulator, LysR family n=1 Tax=Mycobacterium abscessus ATCC 19977 RepID=B1MJW3_MYCA9 Length = 295 Score = 254 bits (651), Expect = 2e-66, Method: Composition-based stats. Identities = 74/313 (23%), Positives = 121/313 (38%), Gaps = 22/313 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +DLNLL L L+QE SVT AA+R+ +P AVS+SL +LR D L V + GL PTP Sbjct: 1 MDLNLLRVLDALLQENSVTAAAERLATSPPAVSRSLGRLRRITGDALLVRAGQGLVPTPR 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTP--RGLKFELAAESPLMMIMLNALSKQIYQRYPQ 125 V + L ++ ++ +L P F + A + + L +++ P Sbjct: 61 AVQIRDELGGLLRRADQILRPGAEFDPGKLQRTFIVQAAELFLTALAVPLLERLRHDAPG 120 Query: 126 ATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + + A+ RG++DI L L + + Sbjct: 121 VNVVFAPEAREDTGALRRGDIDIELGS----------LDHLDPETRHTPVAMLPMVGVAA 170 Query: 186 KDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMA 245 +DHP + TF Y HIS+ +D L G R + + +P ++ +A Sbjct: 171 QDHPLFEGPIDAGTFATYGHISVSRRGKLYGPIDEALARHGLRRRVPVVVPSHTSAMLLA 230 Query: 246 AQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIV 305 + L A L + +P + V + WH RN+ + Sbjct: 231 RSSRLIALTVAGSV-----DTAGLGIRMFDIPLELP-----AVAVGVAWHPRNNDDAAHT 280 Query: 306 WLRETIKNLYASM 318 WLR + +A + Sbjct: 281 WLRGLLIESFARL 293 >UniRef50_D0RZK6 Transcriptional regulator n=1 Tax=Acinetobacter calcoaceticus RUH2202 RepID=D0RZK6_ACICA Length = 303 Score = 254 bits (651), Expect = 2e-66, Method: Composition-based stats. Identities = 73/318 (22%), Positives = 133/318 (41%), Gaps = 21/318 (6%) Query: 1 MKKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPL 60 M DLNLLL L Q ++V KAA+ + ++PSA S +L +LR DPLFV Sbjct: 4 MHGLPHGFDLNLLLVFNALYQHKNVAKAAETLFISPSAFSHALNRLRDTLQDPLFVRMNG 63 Query: 61 GLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQT--PRGLKFELAAESPLMMIMLNALSKQ 118 + PT + +++ + + L K +F +AA ++ L K Sbjct: 64 EMKPTKKSEEIAPSISNCLSTLSQNLFKNSDFDYATSDYEFVIAATEYTAFSVMPLLVKH 123 Query: 119 IYQRYPQATIKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFS 177 + P IK+ + + S+D + G++D E S P ++ F+ Sbjct: 124 LRTIAPNIKIKIISENKQCSIDELMLGKIDFVIGYSELSEGS-------PNHLEVFQCFA 176 Query: 178 DVPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPE 237 D V K+ ++Q+ NL++F+ HI + +D L+++G R I + +P Sbjct: 177 DRYVVIAPKN---IYQSMNLESFISAQHIRVSSWNEHYGVIDQSLKKMGIRRQICVEVPH 233 Query: 238 FEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKR 297 + +M Q L++ + + H++ + LP E Q V ++ Sbjct: 234 VMLAPYMM-QSAELIVTLPLKAVDAIKKNHEIDIFELPFSVPEYQVNVYSV-------EK 285 Query: 298 NSHNPKIVWLRETIKNLY 315 + +WL + I +L+ Sbjct: 286 SKLKACQIWLVDEILSLF 303 >UniRef50_B9J825 Nod transcriptional regulator protein n=1 Tax=Agrobacterium radiobacter K84 RepID=B9J825_AGRRK Length = 333 Score = 254 bits (651), Expect = 2e-66, Method: Composition-based stats. Identities = 71/322 (22%), Positives = 122/322 (37%), Gaps = 25/322 (7%) Query: 1 MKKS--ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNS 58 M + +DLNLLL +LMQER+V++AA+R+ + +S +L +LR DD LFV Sbjct: 3 MMNDAALRKIDLNLLLAFSVLMQERNVSRAAERLLLGQPGLSAALRRLRETLDDELFVRV 62 Query: 59 PLGLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPR--GLKFELAAESPLMMIMLNALS 116 GL PT +S+ + + + + P P +F + L L+ Sbjct: 63 GRGLQPTARALSIAPAIEDALSGIERAIRPPAAFDPSSWQGEFRVGMCDNLESDFFGPLA 122 Query: 117 KQIYQRYPQATIKLRNWD-YDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVL 175 ++ P A + +D ++ + G D S + L Sbjct: 123 ARLRGLAPNARLTGVAFDKREAGRLLDEGAYDFSISVHDEPAS----------WHIRAPL 172 Query: 176 FSDVPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSL 235 F+ H L L+ F + HI++ E + +D L +G R + ++ Sbjct: 173 FNQASACIYDPRHIRLDAPLGLEDFAKADHITVSLEGNTLTNVDLALARVGYHRQVVATV 232 Query: 236 PEFEQSLFMAAQPDNLLLATAP-RYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLW 294 P + +AT P + QLH L + PL P T+L+ Sbjct: 233 PRYSALPMALRA--MPAIATIPESIARCMAQLHNLTVSQPPLDLPAD-------PVTMLY 283 Query: 295 HKRNSHNPKIVWLRETIKNLYA 316 + + + + VW R + A Sbjct: 284 RRVDQADSRAVWFRRLFVEVVA 305 >UniRef50_B1K4K0 Transcriptional regulator, LysR family n=3 Tax=Burkholderia cenocepacia RepID=B1K4K0_BURCC Length = 301 Score = 254 bits (651), Expect = 2e-66, Method: Composition-based stats. Identities = 72/311 (23%), Positives = 130/311 (41%), Gaps = 23/311 (7%) Query: 9 DLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLM 68 DLNLL +L+ ERSV KAAKR++++ SA+S++L+++R F DP+ + + L PTP Sbjct: 10 DLNLLKAFSVLVAERSVVKAAKRLHLSESAMSRTLSRVRDAFGDPILIRAGRSLIPTPRA 69 Query: 69 VSMEQNLAEWMQMSNLLLDKPHHQTPR--GLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 +S+ + + + M+ +L + P F + L + P Sbjct: 70 LSLHPRVLDMLAMAQDILTRAELVDPASLTQTFTIRCNEGFATEFGAKLLDIVTTAAPGV 129 Query: 127 TIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRK 186 ++ D A+ + DI +L I + L D + Sbjct: 130 HLRFAMQDEKDATALREDKADIEVG----------VLGKSGPEIRVQTLLRDRFVGVVAM 179 Query: 187 DHPALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMA 245 HP ++D + RYPH+S+ +D +L LG +R +A ++ F +L +A Sbjct: 180 SHPLAGHDPVSIDAYTRYPHVSVSRRGRRDGPIDALLSALGAKRRVATTVSSFPVALALA 239 Query: 246 AQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIV 305 ++A P Q + + LP+ + V +++WH + +P Sbjct: 240 QG--GSIVANVPFR-QTASGRIGMHTFELPV-------QTEPVVVSMMWHPKVDPDPAHR 289 Query: 306 WLRETIKNLYA 316 WLR+ + A Sbjct: 290 WLRDCLLQTCA 300 >UniRef50_Q7MQI2 Transcriptional regulator n=36 Tax=Gammaproteobacteria RepID=Q7MQI2_VIBVY Length = 321 Score = 254 bits (651), Expect = 3e-66, Method: Composition-based stats. Identities = 77/313 (24%), Positives = 128/313 (40%), Gaps = 23/313 (7%) Query: 9 DLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLM 68 DLNLL+ L++L++E SV+KAA R+N++ SA+S+ L +LR DPLF L PT Sbjct: 18 DLNLLVALRVLIEESSVSKAAVRLNLSQSAMSRVLGRLRDLLGDPLFTREGQHLLPTEKA 77 Query: 69 VSMEQNLAEWMQMSNLLLDKPHHQTPR--GLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + +++ L E ++ LL P F +A M +L +IYQ P Sbjct: 78 LEIDRALGEPLESLRQLLSPS-EFDPHLCTQTFTIATTDYAMQTILPFALPRIYQEAPNV 136 Query: 127 TIKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + +D L D +T D+ + EVL L Sbjct: 137 SFHFLPLQHDRLADQLTYEGADLAICRPTGPVEP----------LRSEVLGRVGVLCLLS 186 Query: 186 KDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMA 245 K HP + +L +L YPH I ++ L + +R + + E +L + Sbjct: 187 KQHPLAGKEMSLADYLYYPHAMIAISDGVKALIEQALVDQ-PQRKMVLRAYHLEAALAIV 245 Query: 246 AQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIV 305 L++ + + L + ALP F ++++WH R H+P Sbjct: 246 -DTMPLIITVPADLAYLVAERYDLVVKALPFQF-------TPFDYSMIWHPRCEHSPAQE 297 Query: 306 WLRETIKNLYASM 318 WLR ++ + + Sbjct: 298 WLRSVVREECSRL 310 >UniRef50_B9Z947 Transcriptional regulator, LysR family n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z947_9NEIS Length = 330 Score = 254 bits (650), Expect = 3e-66, Method: Composition-based stats. Identities = 73/319 (22%), Positives = 127/319 (39%), Gaps = 23/319 (7%) Query: 2 KKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLG 61 ++ LDLNLL+ LMQER V++AA R+ + A+S +LA+LR DDPLFV S Sbjct: 8 HDALRRLDLNLLVAFDALMQERHVSRAAARLFLGQPAMSHALARLRQLLDDPLFVRSGSR 67 Query: 62 LSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQI 119 + PTP + + W++ + L + P F LAA + ++ AL + Sbjct: 68 MEPTPRACELAPQVRAWLEQAQQFLFRADAFDPAAAHATFRLAAPDGMEALLYPALIATL 127 Query: 120 YQRYPQATIKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSD 178 + P ++ + + D L A+ EVD+ + R LF Sbjct: 128 RRDAPGVRLRSQLLETDQQLAALDHDEVDLLITAAPLALR---------DWHSRLRLFKS 178 Query: 179 VPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEF 238 + L + L H+ + + +D++ G ER + + Sbjct: 179 DFISVHSRRQLPLPEPATLADLASCDHVVSSYRGTAAGVVDHLFAAHGLERRVQVLSASL 238 Query: 239 EQSLFMAAQPDNLLLATAPRYCQ-YYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKR 297 + AQ L++ P + ++ +L LP + + L+WH+R Sbjct: 239 LAIGHIVAQ--APLMSIQPAIYRGLFSTTPELACAPLP--------GEARITVGLVWHRR 288 Query: 298 NSHNPKIVWLRETIKNLYA 316 N +P +LR+T+ Sbjct: 289 NDRHPLHRYLRDTVIAAMR 307 >UniRef50_B5ZVD7 Transcriptional regulator, LysR family n=4 Tax=Rhizobium RepID=B5ZVD7_RHILW Length = 321 Score = 254 bits (650), Expect = 3e-66, Method: Composition-based stats. Identities = 68/324 (20%), Positives = 123/324 (37%), Gaps = 26/324 (8%) Query: 1 MKKS---ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVN 57 M + + +DLNLLL +LMQER+V++AA R+ + +S +L +LR DD LFV Sbjct: 1 MMMNDATLRKIDLNLLLAFSVLMQERNVSRAADRLLLGQPGLSAALRRLRETLDDELFVR 60 Query: 58 SPLGLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPR--GLKFELAAESPLMMIMLNAL 115 GL PTP +S+ + + + + P +F + L L Sbjct: 61 VGRGLQPTPRALSIAPAIEDALSGIERAIRPQADFDPASWQGEFRIGMCDNLESAFFGPL 120 Query: 116 SKQIYQRYPQATIK-LRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEV 174 ++ Q P A + + + D+ + G D S + Sbjct: 121 VARLLQLSPGARLIGIASEKRDAARRLDEGVFDFSVSVHDEPAS----------WHIRAP 170 Query: 175 LFSDVPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMS 234 LF+ + L +L+ F H+++ +E + + ++D L G R + + Sbjct: 171 LFNQASICIYDEAQLKLKAPLSLEDFANVAHVTVSFEGNASTSIDTALSRTGHVRRVVAT 230 Query: 235 LPEFEQSLFMAAQPDNLLLATAP-RYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLL 293 +P F ++ P + QLH L + A PL P T+L Sbjct: 231 VPRFSALPTALRA--MPAISVVPESIGRCMAQLHGLTICAPPLSLPAD-------PVTML 281 Query: 294 WHKRNSHNPKIVWLRETIKNLYAS 317 + + + + + W R ++ Sbjct: 282 YRRVDQADGRARWFRRLFLDVADE 305 >UniRef50_A5VBV3 Transcriptional regulator, LysR family n=1 Tax=Sphingomonas wittichii RW1 RepID=A5VBV3_SPHWW Length = 319 Score = 254 bits (649), Expect = 3e-66, Method: Composition-based stats. Identities = 71/319 (22%), Positives = 125/319 (39%), Gaps = 13/319 (4%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 ++ DLNLL L +L+ ER+VT+AA+R+ VT A S +L +LR FDD L L Sbjct: 1 MQLSHFDLNLLRALDILLTERNVTRAAERLCVTQQAASSALQRLRHHFDDELLTRVGRHL 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKF--ELAAESPLMMIMLNALSKQIY 120 TPL S+ + E + LD H P ++ +A + ++L L + + Sbjct: 61 ELTPLARSLIMPVREALLTVQAALDARPHFDPATARYKCRIAMSDYCLHVILPHLLRYLT 120 Query: 121 QRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 P + S D + GE+D + + I LF D Sbjct: 121 ITAPNMQCAVETLGPASFDRLEMGELDFCLTAHDMRLYGTH---RPSRHIRTMPLFRDDF 177 Query: 181 CVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQ 240 H + +L T+ R H ++ + + +++ E IA+ +P F Sbjct: 178 VCVADPAHVDIADGMSLRTYRRARHNTVDFGEDLKTIVEDAWASSSTEFDIAVLVPNFAA 237 Query: 241 SLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 +FM L+ + R L + P+ + Q+ L WH+R+ Sbjct: 238 QIFMLPGT-PLVATSQRRLANTLAPRLGLAVAECPMKLPQLQEI-------LFWHERSEQ 289 Query: 301 NPKIVWLRETIKNLYASMA 319 +P +++R+ + + Sbjct: 290 DPARIFVRKAFGLMVDQLG 308 >UniRef50_A0NZC9 LysR family regulatory protein n=3 Tax=Rhodobacteraceae RepID=A0NZC9_9RHOB Length = 305 Score = 254 bits (649), Expect = 4e-66, Method: Composition-based stats. Identities = 74/317 (23%), Positives = 135/317 (42%), Gaps = 20/317 (6%) Query: 4 SITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLS 63 ++ + DLNLL+ + +MQ S++ AA I ++PSAVS +LA+LR +D LF + G+S Sbjct: 3 NLRSFDLNLLVIFRAIMQRGSISGAANEIGLSPSAVSHALARLRVMLNDELFFRTAEGVS 62 Query: 64 PTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQIYQ 121 PT + ++ + + + H P F + + +L L+K++ Sbjct: 63 PTERARELSVDIERGLSFISTAISLQHQFVPAETNRVFTMQVADYVAGFLLPRLAKRLQS 122 Query: 122 RYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPC 181 P TI + + VD+ P + + L +D Sbjct: 123 EAPGITIDILPFSISPESVWD--RVDM--------QVRLTPGRLQPEMVRSQRLLADEIV 172 Query: 182 VWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQS 241 V +R+ HP + + + + PH+ + + T +++ L G +R +AM++ + + Sbjct: 173 VLMRRGHPRVDEPMTAELYAELPHVKLSQSATGTTVIEDALAARGLKRHMAMTVASWFEI 232 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 + A+ D L+A AP+ + L + PLP DE F L W R Sbjct: 233 PDIVARSD--LIAIAPQRLLSLDPRLG-KLHSAPLPLDEVV-----FSFDLCWDLRKERE 284 Query: 302 PKIVWLRETIKNLYASM 318 P WLR+ I ++ + Sbjct: 285 PGQKWLRQLIVEMFEEV 301 >UniRef50_A5F3E5 Transcriptional regulator, LysR family n=29 Tax=Vibrio RepID=A5F3E5_VIBC3 Length = 308 Score = 254 bits (649), Expect = 4e-66, Method: Composition-based stats. Identities = 72/320 (22%), Positives = 136/320 (42%), Gaps = 24/320 (7%) Query: 1 MKKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPL 60 M + DLNLL +M+ SV+KAA ++ +T +AVS++L++LR DPLF+ Sbjct: 1 MIM-LRDYDLNLLTVFDSVMKLGSVSKAADKLGMTSAAVSQNLSRLREQVGDPLFIRQGR 59 Query: 61 GLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQ 118 GL PT ++M +++AE + L+ P +F + + +++L L ++ Sbjct: 60 GLQPTQYALNMHKHVAEGLSAIRFGLETDAGFDPATSKREFIIGGQGYFDLVVLPPLLQK 119 Query: 119 IYQRYPQATIKLRNWDYDSL---DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVL 175 I P T+ L++++ D ++ E D+ + L +I + Sbjct: 120 ISDIAPHITVNLKSYEDDHFTPSQVLSEREADLFLAA----------LPISHPSIVTTQV 169 Query: 176 FSDVPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSL 235 + V K+HP L T + + F H ++ + + +++ ++ R + Sbjct: 170 AEEALVVVYAKNHPRLGSTLSFEQFFAEKHTALTSRRFGNYLFSSLVDQVLPARRVHYQS 229 Query: 236 PEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWH 295 + A+ D LL T R + + L + LP VP + WH Sbjct: 230 ESMLNLMATASVTD-LLCFTPKRLADMWAEKLGLQIQPLPFEI-------RSVPTFMCWH 281 Query: 296 KRNSHNPKIVWLRETIKNLY 315 K + ++WLRE I+ + Sbjct: 282 KAKQQDKGLIWLREQIEAIL 301 >UniRef50_B9K150 Transcriptional regulator LysR family n=1 Tax=Agrobacterium vitis S4 RepID=B9K150_AGRVS Length = 318 Score = 254 bits (649), Expect = 4e-66, Method: Composition-based stats. Identities = 59/318 (18%), Positives = 108/318 (33%), Gaps = 20/318 (6%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 LDLNLL+ L L++ R+V++AA+ + +T SA+S +L +LR +FDDPL + + Sbjct: 1 MRFKNLDLNLLVALDTLIRVRNVSRAAEEMFITQSAMSNALGRLRDYFDDPLLIQVGRSM 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTP--RGLKFELAAESPLMMIMLNALSKQIY 120 +PL S+E L + + + P L + ++ +Q+ Sbjct: 61 ELSPLAASLELPLRDIIVRIEAAVVSTPSFIPHESTRSINLIVSDYTLNTIMPPFLRQVT 120 Query: 121 QRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 P I + + RGE D+ + + E D Sbjct: 121 ALAPGVQIHFQPQQNYPHLLLERGEADLLVAPSDFC----------STNHPSEPFLEDQI 170 Query: 181 CVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQ 240 C + + P FL H+ + LG + + S F Sbjct: 171 CCVVDVNGPLAEGPMTEKDFLEAGHVVMQPPNGGETFAQRACDRLGLKIKVEASTFSFSS 230 Query: 241 SLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 F+ + + + L + ++ + L WH + Sbjct: 231 LPFLIRGSKRIAMV-QRSLAECMLNLGGIRIMD-------PPFPLPPLLQCLQWHSYRTR 282 Query: 301 NPKIVWLRETIKNLYASM 318 +P +VW R + A + Sbjct: 283 DPALVWFRSQMHEAAARV 300 >UniRef50_B5JUQ0 Transcriptional regulator, LysR family, putative n=1 Tax=gamma proteobacterium HTCC5015 RepID=B5JUQ0_9GAMM Length = 300 Score = 253 bits (648), Expect = 5e-66, Method: Composition-based stats. Identities = 60/317 (18%), Positives = 123/317 (38%), Gaps = 21/317 (6%) Query: 1 MKKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPL 60 MK ++ ++DLNL + +M++ S+ AA + ++ A S +L +LR D LFV + Sbjct: 1 MKLNLRSVDLNLFPVFEAIMEQGSLNMAACHLGMSQPAASAALKRLRLTIKDELFVRTRR 60 Query: 61 GLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTP--RGLKFELAAESPLMMIMLNALSKQ 118 GL PT + + + ++ +++ + P F++A M+ + L Sbjct: 61 GLEPTARALELYPVVHHLLESLRGEMERANQFDPLFCERIFKVAGGDYFDMVFMGRLMNM 120 Query: 119 IYQRYPQATIK-LRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFS 177 + + P+ ++ + + +SL+ I RG++D+ + L LF Sbjct: 121 LRESAPKVQVESVIHGFQESLNLIQRGKLDLCLHYDKEIAHELPTL----------KLFE 170 Query: 178 DVPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPE 237 + V + DHP + +L ++ H+ + + LD +L R + + Sbjct: 171 ESMSVLMAADHPYADKQLSLSDYIALEHVVLPKLSGNANQLDVILGGFNENRCVRARVSS 230 Query: 238 FEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKR 297 + Q L+ R + + L P ++ +P L W Sbjct: 231 VSSMVMAIKQS-YLIGTIPTRMASILCEGYDLVFKPFP-------KEAPPIPIYLSWAPF 282 Query: 298 NSHNPKIVWLRETIKNL 314 + + W R I +L Sbjct: 283 SDKDSVHRWFRNMIASL 299 >UniRef50_B7VJC4 Putative LysR-like regular protein n=4 Tax=Vibrionales RepID=B7VJC4_VIBSL Length = 308 Score = 253 bits (648), Expect = 5e-66, Method: Composition-based stats. Identities = 68/318 (21%), Positives = 120/318 (37%), Gaps = 20/318 (6%) Query: 4 SITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLS 63 + +DLNLL+ LQ L + SV+KAA+R V+ SA+S SL +LR FDDPLF + Sbjct: 5 NWKGIDLNLLIALQALYKTNSVSKAAERCYVSQSAMSHSLQRLRKLFDDPLFERVGSKME 64 Query: 64 PTPLMVSMEQNLAEWMQMSNL--LLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQ 121 T + + + + LL K +++ + AL I Q Sbjct: 65 ATDRAIELSSTVEALLNTIQSEVLLSKSFDAATYKGTWKIGLTDYAEQMFAPALFDLIKQ 124 Query: 122 RYPQATIKLRNWDYDSLDAI-TRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 P + + L N + + + ++D+ + L+++ Sbjct: 125 SSPNSQVVLFNVNRSNYQQVFEDAKLDMAIGS----------FGEVSKQYRTTHLYTEQH 174 Query: 181 CVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQ 240 K ++ +L+ F+ H + S +D L ELG R +A+ F Sbjct: 175 VCLFDKSVVSIEGPISLEQFVAVEHALVSPAGSLKTGVDKRLAELGFSRKVAICSSNFLT 234 Query: 241 SLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 + + LL P+ + Q +VA+ P D + L++ K Sbjct: 235 VKRLIRGRE--LLCIVPKLVARNDIQDQDTVVAVEPPIDVP-----DFDIQLIYRKTKHL 287 Query: 301 NPKIVWLRETIKNLYASM 318 + K LR+ +S+ Sbjct: 288 DDKNKLLRKLFTQAVSSV 305 >UniRef50_A6W028 Transcriptional regulator, LysR family n=1 Tax=Marinomonas sp. MWYL1 RepID=A6W028_MARMS Length = 309 Score = 253 bits (648), Expect = 5e-66, Method: Composition-based stats. Identities = 55/317 (17%), Positives = 125/317 (39%), Gaps = 22/317 (6%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 LDLNLL+ L L+ E+S+TK A+++N++PSA+S SL++LR +F+D L + Sbjct: 1 MRFKKLDLNLLVALDTLLTEQSITKGAEKLNMSPSALSNSLSRLRDYFEDDLLTQIGRRM 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNL--LLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIY 120 TPL +++ ++ + L+ F + +++ + + Sbjct: 61 VITPLGENLKVSVRNALNNIESTILVQPSFEPQTTDRIFSIFCSDYTQTVLVPHALEIVG 120 Query: 121 QRYPQATIKLR-NWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 ++ A +L + + + +G+ D+ + + ++L+ + Sbjct: 121 KQKSTARFQLLAQVANNPHEQLEQGKADLLIIPSDF----------MSTEHPCDILYEEE 170 Query: 180 PCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVL-QELGRERTIAMSLPEF 238 + K + + H+ + E + + Q+ G +R + + F Sbjct: 171 FVCVVWKHSKIASGELTAEKYAAAGHVLMRPEATKKDFFGTLFTQKYGIKRHVIATTFSF 230 Query: 239 EQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRN 298 + +N+ R ++ L ++ LP +Q + WH+ Sbjct: 231 ASLPALVIGSENIA-TIHARLATKMAKVWPLKILPLPFDIPPMKQ-------CVQWHQYR 282 Query: 299 SHNPKIVWLRETIKNLY 315 +++ ++WLR T+K Sbjct: 283 NNDEGLIWLRNTLKEAA 299 >UniRef50_A1UYG7 Transcriptional regulator, LysR family n=45 Tax=Burkholderia RepID=A1UYG7_BURMS Length = 439 Score = 253 bits (648), Expect = 5e-66, Method: Composition-based stats. Identities = 67/320 (20%), Positives = 114/320 (35%), Gaps = 23/320 (7%) Query: 1 MKKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPL 60 M+ LDLNL L + + ++ AA+ +++T AV+ +L +LRA F DPLFV Sbjct: 132 MQPD-HRLDLNLFRVLDAVYVQGGISAAARALHLTQPAVTHALNRLRAHFGDPLFVRQGN 190 Query: 61 GLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTP--RGLKFELAAESPLMMIMLNALSKQ 118 + PT + ++ ++ +P + F + L I L L + Sbjct: 191 KVVPTERTREVIADVQRHLKGLQDAARAQTRFSPGALDMSFVVGVRDVLESIALPQLVET 250 Query: 119 IYQRYPQATIKLRNWD-YDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFS 177 + + P + R D + G +D+ E I E + Sbjct: 251 LAREAPGVRLVSRRVPVADIGRELGSGNLDLAI----------ERRVPAGPRIVAEHVAD 300 Query: 178 DVPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPE 237 D V +R+DH + H+++ LD +L GR R I + Sbjct: 301 DTLVVAMRRDHALAGAPLRRADYFAAGHVTVSPLGEPHT-LDVLLGADGRFRRIQLVCQH 359 Query: 238 FEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKR 297 + + + A D LLL Y +L L LPL P WH+ Sbjct: 360 YFAACQIVASGD-LLLTLPRSYALRMTRLLPLAAQPLPLRL-------KPYPILAYWHES 411 Query: 298 NSHNPKIVWLRETIKNLYAS 317 + W R+ + + + Sbjct: 412 RELDRAHQWFRQRVIEVVRA 431 >UniRef50_UPI0001B54141 LysR family transcriptional regulator n=1 Tax=Streptomyces sp. C RepID=UPI0001B54141 Length = 298 Score = 253 bits (647), Expect = 6e-66, Method: Composition-based stats. Identities = 81/310 (26%), Positives = 130/310 (41%), Gaps = 20/310 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +DLNLL L L+QE SVT+AA+R+ +P+AVS++LA+LR DPL V + GL PTP Sbjct: 1 MDLNLLRVLDALLQENSVTRAAERLGTSPAAVSRTLARLRRTVGDPLLVRAGQGLVPTPR 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTP--RGLKFELAAESPLMMIMLNALSKQIYQRYPQ 125 V + + + ++ + +L F + A L++ + +L+++I+ PQ Sbjct: 61 AVELREEVGALIRGCDNVLRPGAGFDAVHLQRTFTVQATDLLLVGLAGSLTERIHAEAPQ 120 Query: 126 ATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + + + +G VD+ +L L I L R Sbjct: 121 VDVVFLPEAVEGGPGLRQGLVDVELG----------VLGHLDPEIRTRRLTRMPLVGIAR 170 Query: 186 KDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMA 245 HP + F HI I +D+ L ELG R A+ +P ++ +A Sbjct: 171 TGHPLFDGRIDARRFAAADHIGISRLGKRLGPIDSALAELGLRRRTAVVVPSHTSAMMLA 230 Query: 246 AQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIV 305 D + L+ A + L A P+P D + + WH RNS +P Sbjct: 231 RDTDLVALSLADWIPDTIAAM---GLRAFPVPLDL-----EPLDLGMAWHPRNSADPGHR 282 Query: 306 WLRETIKNLY 315 W RE + Sbjct: 283 WFREHLAAAV 292 >UniRef50_B2T3Y4 Transcriptional regulator, LysR family n=3 Tax=Burkholderiales RepID=B2T3Y4_BURPP Length = 321 Score = 253 bits (647), Expect = 7e-66, Method: Composition-based stats. Identities = 69/313 (22%), Positives = 122/313 (38%), Gaps = 23/313 (7%) Query: 9 DLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLM 68 DLNLL L L+ E++VT+AA+ ++++ SA+S++L +LRA DPL V + + TP Sbjct: 24 DLNLLFALDALLTEKNVTRAARSLHLSASAMSRTLTRLRAATGDPLLVRAGRNMVLTPHA 83 Query: 69 VSMEQNLAEWMQMSNLLL---DKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQ 125 + + + + LLL + + A + L ++ P Sbjct: 84 EEIREQTHNIVLEARLLLCPSSAAADFSTLSRTLRIRANEAFVEAFGAPLIAEVTAVAPL 143 Query: 126 ATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + + S + + G D+ +L + I LF D +R Sbjct: 144 VRLHFSSKAEKSAEYLRNGSADLEIG----------VLEEMGPEIRVRALFRDRYVGVVR 193 Query: 186 KDHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 K HP + + + + H+ + ALD + G ERT +P F +L + Sbjct: 194 KGHPLETEQDVTIARYAAFGHVVAPHGRQIIDALDAAIALQGLERTTVAVVPSFPAALAV 253 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 A D L+A P Q L LP+ + + +WH R ++P Sbjct: 254 AQASD--LVALLPASFANAQQSESLHSFELPVA-------TEGLTISQMWHPRLENDPVH 304 Query: 305 VWLRETIKNLYAS 317 W R+ + ++ Sbjct: 305 RWFRQLVLDVCRR 317 >UniRef50_Q7MCZ8 Transcriptional regulator n=13 Tax=Vibrionaceae RepID=Q7MCZ8_VIBVY Length = 313 Score = 253 bits (647), Expect = 7e-66, Method: Composition-based stats. Identities = 71/297 (23%), Positives = 133/297 (44%), Gaps = 20/297 (6%) Query: 21 QERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSMEQNLAEWMQ 80 +E V++AA R+++T SA+S+ LA+LR DPL V L TP ++ L + + Sbjct: 18 EECHVSRAADRLHITQSAMSRQLAQLRELCSDPLLVREGNRLVATPHAEALRPKLVQLLS 77 Query: 81 MSNLLLD-KPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQATIKLRNWDYDSLD 139 L D + + + L++ + ++ LS+ + ++ P+ T+ R W LD Sbjct: 78 EFEHLFDHQAFNPQDWQGQLVLSSSDYVAQFIVPTLSRVLIEQAPRLTLSYRLWQPQYLD 137 Query: 140 AITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPALHQ-TWNLD 198 ++ + + +L S P + Y + D +R+ HP + +L+ Sbjct: 138 SLLDTGIHLA----------STMLPSPPKELSYTKIGEDYSVCVMRQGHPLSGKAALSLE 187 Query: 199 TFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQPDNLLLATAPR 258 LRY HI + A D+VL++LG+ R IA+ +P F ++ + Q D +++ Sbjct: 188 DMLRYSHIKVTGGGDKDSATDSVLRKLGKTRHIALQVPFFSAAVNVLIQSDYMMVV-PEH 246 Query: 259 YCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWLRETIKNLY 315 + + PLPFD + + L+WH + H+ W+RE + + Sbjct: 247 IAVNLAKSQP--ICHYPLPFDTEIHQ-----YWLMWHPKYDHDSAHRWVREKVTRVM 296 >UniRef50_Q5ZSZ0 Transcriptional regulator, LysR family n=4 Tax=Legionella RepID=Q5ZSZ0_LEGPH Length = 305 Score = 253 bits (646), Expect = 8e-66, Method: Composition-based stats. Identities = 63/319 (19%), Positives = 136/319 (42%), Gaps = 26/319 (8%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVN-SPLGLS 63 + L+LNLL L L+ R +T A+K++ ++ S++S L +LR F D L V + Sbjct: 1 MDKLNLNLLRALYALLTCRHLTLASKKMGISQSSMSIYLKQLREHFHDDLLVRGQGNIMQ 60 Query: 64 PTPLMVSMEQNLAEWMQMSNLLLDKPHHQTP--RGLKFELAAESPLMMIMLNALSKQIYQ 121 TPL S+ + + + L + P F + + +++ +L K++ Q Sbjct: 61 LTPLANSLIGKARQALSLIETLFNTIETFNPLISERSFSIGMTDLMSILLTPSLIKRLEQ 120 Query: 122 RYPQATIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 P + +++ Y ++++ G++D+ + +P + + LF D Sbjct: 121 EAPGVKLNIKHPSYLNTVEVFESGDIDLMIG----------MFERVPEGLKQQKLFQDEA 170 Query: 181 CVWLRKDHPAL-HQTWNLDTFLRYPHISICWEQS-DTWALDNVLQELGRERTIAMSLPEF 238 + +HP + ++ +YP I ++ D L++LG ++ +++SL + Sbjct: 171 VIVGGNNHPGIQKGKICIEELFKYPLIQFSLRETPFYNYFDRYLRQLGHDKRVSISLGQ- 229 Query: 239 EQSLFMAAQPD-NLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKR 297 + + D + L + + + + L L + ++P D WH++ Sbjct: 230 -GIMPLLVLTDSHYLTLSIRKVAEKLSHLIPLSIASVPFEVD-------SFNCYQYWHQK 281 Query: 298 NSHNPKIVWLRETIKNLYA 316 + +P WLRE I ++ Sbjct: 282 DDADPGHRWLREMILSIAK 300 >UniRef50_Q471I4 Regulatory protein, LysR:LysR, substrate-binding n=1 Tax=Ralstonia eutropha JMP134 RepID=Q471I4_RALEJ Length = 323 Score = 253 bits (646), Expect = 9e-66, Method: Composition-based stats. Identities = 79/315 (25%), Positives = 128/315 (40%), Gaps = 23/315 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 L LN LL L +L+ ERS+TKAA+ +N+T A+SK+LA+LR +F DPLFV L + PTP Sbjct: 12 LSLNQLLVLDVLLSERSLTKAARVLNLTQPALSKTLARLRQYFGDPLFVRVGLRMEPTPK 71 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTP--RGLKFELAAESPLMMIMLNALSKQIYQRYPQ 125 + + + +Q L P F ML L ++ + P Sbjct: 72 ALELADPVRGILQSVRALRSDHVGFDPRTSQRSFSFFLLDAGASQMLPPLLSRLAEEAPG 131 Query: 126 ATIKLRNWDYDSLD-AITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 ++ N D LD + G VD+ L +I ++L+ + + Sbjct: 132 ILVQAVNADATHLDIWLENGLVDLAIGS----------FPGLTQSIRRQLLWHETYGAVV 181 Query: 185 RKDHPALHQTWNLDTFLRYPHISICWEQSDTWA--LDNVLQELGRERTIAMSLPEFEQSL 242 RKDHP L Q +LD F+ H+ + + ++ ++ I +P F + Sbjct: 182 RKDHPRLAQLGDLDAFVAEKHVLVSAVGTGHQHLSIERAIEAAVPHTNIICRVPSFATAG 241 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 +A D + + + + L +V PL + WH R P Sbjct: 242 LIAKHSDAVAVLPL-TLARALCKDLDLTVVMPPLTLP-------GMDIAQHWHDRVHREP 293 Query: 303 KIVWLRETIKNLYAS 317 W+R + L+A Sbjct: 294 GNQWIRALVHRLFAR 308 >UniRef50_A5VCH0 Transcriptional regulator, LysR family n=1 Tax=Sphingomonas wittichii RW1 RepID=A5VCH0_SPHWW Length = 327 Score = 253 bits (646), Expect = 9e-66, Method: Composition-based stats. Identities = 77/336 (22%), Positives = 137/336 (40%), Gaps = 42/336 (12%) Query: 4 SITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLS 63 +LDLNLL L +E SVT AA + +TPSAVS SL +LR D LF+ G++ Sbjct: 5 HFRSLDLNLLRVFDALTEEGSVTGAAGLLGLTPSAVSHSLNRLRHILKDDLFLRGAKGMN 64 Query: 64 PTPLMVSMEQNLAEWMQMSNLLLD-KPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQR 122 PTP +++ + + L+ +F +A + +++ + + + Sbjct: 65 PTPKALALAVPIRRALVDIQQALNGDSFVPEKTDRRFSIACGDYVTAVLMPEVIARFRKA 124 Query: 123 YPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCV 182 P A ++++ + + G +D+ G +P + E LF+D Sbjct: 125 APLAELRIQPVGA-VMKELDAGRIDLAMGG----------FERIPERLASEPLFADDMVW 173 Query: 183 WLRKDHPALHQTWNLDTFLRYPHISICWEQSDT--------------------WALDNVL 222 +R D P ++ L+ PH++I +D LD Sbjct: 174 VMRADSPFANRQPTLEGLAALPHLAIASPDNDRAVSGIVSDAGLERRVVRDDPRILDQYF 233 Query: 223 QELGRERTIAMSLPEFEQSLFMAAQPDNLLLATAPR-YCQYYNQLHQLPLVALPLPFDES 281 +E G RT+AM+ P ++ + A+ D L A PR + + ++L L P P Sbjct: 234 EERGLRRTVAMTAPNPIVAMAIVAECD--LAAMMPRNLAEAFADRYKLALWKPPHP---- 287 Query: 282 QQKKLEVPFTLLWHKRNSHNPKIVWLRETIKNLYAS 317 + +WH+ + P + WLR I+++ Sbjct: 288 ---SALFQISTVWHRWHGDQPAVDWLRAMIRSVAEE 320 >UniRef50_Q2BMZ3 Putative transcriptional regulator, LysR family protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BMZ3_9GAMM Length = 303 Score = 253 bits (646), Expect = 9e-66, Method: Composition-based stats. Identities = 55/300 (18%), Positives = 115/300 (38%), Gaps = 18/300 (6%) Query: 18 LLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSMEQNLAE 77 ++++ER VT+AA+R+++T SA+S+ L++LR F DPL + + + + Sbjct: 14 VMLEERHVTRAAERLHLTQSALSRQLSQLREHFSDPLLIREGNEYLLSARAKQLLPKIQA 73 Query: 78 WMQMSNLLLD-KPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQATIKLRNWDYD 136 + + L + +F A + + + ++ P I W + Sbjct: 74 ILTEVDELSEGDSFDPLQCRRRFSFACTDHVAQFIFPEILGRLRDEAPGIDITFEMWRPE 133 Query: 137 SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPALHQTWN 196 L + + +DI ++LP + + D P + ++HP + Sbjct: 134 WLGRLGQLPLDIA----------STTTANLPENVRSIHIGQDSPVCLMAENHPLAACELS 183 Query: 197 LDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQPDNLLLATA 256 ++ L YP + + D L+ +G +R I +P F + L++ Sbjct: 184 IEKMLEYPFLRLNSGGDKDSFFDKALESMGLQRRIQYEVPFFSAAFQALEGSSLLMI-LP 242 Query: 257 PRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWLRETIKNLYA 316 + L + LPL + + + + WH+ + +P WLR+ I + Sbjct: 243 HHIAMNALEHFPLAVAQLPLA------EVPKNQYHMCWHEVHDQDPAHSWLRQLIAEVLR 296 >UniRef50_A9F0I7 Transcriptional regulator, LysR family n=20 Tax=Proteobacteria RepID=A9F0I7_SORC5 Length = 319 Score = 252 bits (645), Expect = 1e-65, Method: Composition-based stats. Identities = 69/298 (23%), Positives = 122/298 (40%), Gaps = 21/298 (7%) Query: 22 ERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSMEQNLAEWMQM 81 E SVT AA+R+ ++PSA+S++LA+LR DPL V + GL PTP + + + ++ +Q Sbjct: 18 EGSVTGAARRLRLSPSAMSRALARLRETLGDPLLVRAGRGLVPTPRALELRERVSHLVQG 77 Query: 82 SNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQIYQRYPQATIKLRNWDYDSLD 139 + +L + F L + AL ++ + P ++ Sbjct: 78 AEAVLRPAEELDLKRLVRTFTLRTSEGFVESFGPALIERTGAQAPGVRLRFVAKPDKDSA 137 Query: 140 AITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPALHQTWNLDT 199 + G VD+ + + + + LF D +R DHP Sbjct: 138 PLRTGAVDL---------ETGVVDEDTSPELRTQALFRDRFIGVVRSDHPLGRAKITPAR 188 Query: 200 FLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQPDNLLLATAPRY 259 + H+ +D L LG R + + F ++ +A D L+AT P Sbjct: 189 YAAGRHVVFSRRGVAKGRIDESLAALGLAREVVTIVGGFATAIALARATD--LIATVP-- 244 Query: 260 CQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWLRETIKNLYAS 317 ++ + + L + LPF E+ +LLWH R +P WLR++++ + A Sbjct: 245 -DHHTRSLRDGLFSFALPFAAP-----EITVSLLWHPRLDADPAHRWLRDSVREVVAG 296 >UniRef50_Q8KY13 LysR-type transcriptional activator n=1 Tax=Rhizobium sp. TAL1145 RepID=Q8KY13_9RHIZ Length = 320 Score = 252 bits (645), Expect = 1e-65, Method: Composition-based stats. Identities = 66/314 (21%), Positives = 129/314 (41%), Gaps = 21/314 (6%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 + +DLNLL LLMQERSVTKAA R T SA+S SL +LR F D LFV ++P Sbjct: 7 LNQIDLNLLRVFDLLMQERSVTKAADRAGRTQSAISHSLNRLREIFGDELFVKRAGSMNP 66 Query: 65 TPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQIYQR 122 T + + + + ++ + + P +F + + L L ++ + Sbjct: 67 TAQARELATVITQALSDIEGVVSQRINFKPSESHRQFRIGVTDYTSALYLPTLLEEFNSK 126 Query: 123 YPQATIKLRNWD-YDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPC 181 P A +++ Y++ + ++ ++D G S I VL Sbjct: 127 APNARLRIVPVYLYEAAELLSDPDLDCVLIGNPIIRES---------HIVETVLARHEML 177 Query: 182 VWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQS 241 + + ++ +L PH+ I + ++ D L +G R +A ++P + + Sbjct: 178 CAAWSGNAVIKD-LTMEKYLAMPHLQISPDGDESGVSDKALATIGLSRRVAATIPYYMVA 236 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 + ++ A A ++ ++ + PL +V +L++ + + Sbjct: 237 PKVLRGT-QMIAAFADGMLSLIDESSEILVTRPPLALP-------DVRVSLIYVRTKQTD 288 Query: 302 PKIVWLRETIKNLY 315 +WLR I+++ Sbjct: 289 AGHIWLRSCIRSIV 302 >UniRef50_Q5QVJ9 Transcriptional regulator, LysR family n=1 Tax=Idiomarina loihiensis RepID=Q5QVJ9_IDILO Length = 331 Score = 252 bits (645), Expect = 1e-65, Method: Composition-based stats. Identities = 70/319 (21%), Positives = 135/319 (42%), Gaps = 25/319 (7%) Query: 4 SITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLS 63 ++ +LDLNLL+ L L++E+ VT+AA+R+ ++ A S +L + R FDDPL + Sbjct: 29 NLRSLDLNLLVILHALLEEQHVTRAARRLALSQPATSNALDRCRHIFDDPLLERVAGEMR 88 Query: 64 PTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGL-KFELAAESPLMMIMLNALSKQIYQR 122 T S+++ L++ + +++ P + + L +I++ L ++ Sbjct: 89 LTAKAQSLKEPLSQALLAITAIVEIPKVELTQVRQTVRLIMADQPGLIVMTHLLTKLSTS 148 Query: 123 YPQATIKLRNW--DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 P+ + L W D+L + GE DI S +LP + + + Sbjct: 149 APKVNLSLLPWRSSKDALHRLENGEADIAIST----------FPALPPKFYRQQIAYESY 198 Query: 181 CVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQ 240 V +R HPA + +N D +L +PHI + E + +++ VL + G+ R + +P F Sbjct: 199 VVAMRASHPAAQK-FNADEWLAWPHIVVSGEGNARGSVEEVLAQQGKVRHVGAVVPNFTM 257 Query: 241 SLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 + D + + L + P+ L WH R Sbjct: 258 IDPLIKATDMIATTPM----NCLSDPQGLAIFEPPIAVP-------GFSLHLAWHARRDS 306 Query: 301 NPKIVWLRETIKNLYASMA 319 + + + ET+++L+ Sbjct: 307 DLVVKHVIETLQHLFQKEG 325 >UniRef50_P55359 Nodulation protein D 1 n=250 Tax=Proteobacteria RepID=NODD1_RHISN Length = 322 Score = 252 bits (645), Expect = 1e-65, Method: Composition-based stats. Identities = 65/319 (20%), Positives = 129/319 (40%), Gaps = 21/319 (6%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 LDLNLL+ L LM ER +T AA+ IN++ A+S ++ +LR +F D LF + L Sbjct: 1 MRFKGLDLNLLVALDALMTERKLTAAARSINLSQPAMSAAITRLRTYFRDELFTMNGREL 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDK--PHHQTPRGLKFELAAESPLMMIMLNALSKQIY 120 PTP ++ + E + +L + P + F + + ++ L + ++ Sbjct: 61 VPTPRAEALAPAVREALLHIHLSIISWDPFNPAQSDRSFRIILSDFMTLMFLERVVVRVA 120 Query: 121 QRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 + P + +L + + + + RG+VD + LF + Sbjct: 121 REAPAVSFELLPFSDEPDELLRRGDVDFLILPEMFMSHT----------HPRAKLFDERF 170 Query: 181 CVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQ 240 + L ++D ++ H++ + + + +L+E G R + +++P F Sbjct: 171 VCVSCPTNQKLPPQLSIDNYVSMGHVAAQFGKQRPSVEEWLLREHGLRRRVEVAVPGFTM 230 Query: 241 SLFMAAQPDNLLLATAP-RYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 + D +AT P R ++ + L + LP P + W +S Sbjct: 231 IPSFLSGTDR--IATLPLRLAMHFAKAIPLRITELPQPI------FPAFTEAVQWPAPHS 282 Query: 300 HNPKIVWLRETIKNLYASM 318 +P +W+RE + + Sbjct: 283 SDPASLWMREIFLQEASRV 301 >UniRef50_A5V6I2 Transcriptional regulator, LysR family n=1 Tax=Sphingomonas wittichii RW1 RepID=A5V6I2_SPHWW Length = 301 Score = 252 bits (645), Expect = 1e-65, Method: Composition-based stats. Identities = 66/319 (20%), Positives = 124/319 (38%), Gaps = 21/319 (6%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 LDLNLL+ L + RSV+ AA+ ++++ SA+S +LA+LRA+FDD L V L Sbjct: 1 MRFQGLDLNLLVAFDTLAEHRSVSLAAEAMHLSQSAMSAALARLRAYFDDELLVPRGRTL 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTP--RGLKFELAAESPLMMIMLNALSKQIY 120 TP + + + + + + P P +F + A + ++L ++ Sbjct: 61 VLTPRAEQLAPEVRDTLLRIHATIAHPAAFDPIETKREFTIVASDYVQAVLLEPFMRKAA 120 Query: 121 QRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 P ++ +D RG +D+ S + + LF D Sbjct: 121 HHAPGMRFRILPISQQGIDEFKRGVIDLIIVAD----------SVILPEHPSQKLFEDEA 170 Query: 181 CVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTW-ALDNVLQELGRERTIAMSLPEFE 239 + DHP + +++ F H++ D +L E R I + +P F Sbjct: 171 KLICSADHPTIGDEISMEQFGTVGHVTTSLHHHRPGSLFDLMLLERSIARRIEIQVPAFS 230 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 + + + A R Y ++ + L++LP + + WH Sbjct: 231 MMAGAVVGTERVAILHA-RLATSYARILPIKLLSLPFALP-------PIREVIQWHALRQ 282 Query: 300 HNPKIVWLRETIKNLYASM 318 + + WL E + + A++ Sbjct: 283 RDRGLQWLLEALTSEAAAL 301 >UniRef50_A4XED3 Transcriptional regulator, LysR family n=1 Tax=Novosphingobium aromaticivorans DSM 12444 RepID=A4XED3_NOVAD Length = 333 Score = 251 bits (643), Expect = 2e-65, Method: Composition-based stats. Identities = 59/318 (18%), Positives = 124/318 (38%), Gaps = 22/318 (6%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 LDLNLL+ L L+ ERSV+ AA R+ ++ SA S +L +LR +F D L V + Sbjct: 1 MRFGRLDLNLLVALDALLTERSVSLAADRLCLSQSATSSALGRLREYFGDELLVVKGRNM 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNL--LLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIY 120 T + + + ++ + P + A ++L + Sbjct: 61 ILTARAEELIEPVRAVLEQIRTTVAVAPPFDPATTDRVIRIMASDYSTEVLLTDALATME 120 Query: 121 QRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 + P +++ ++AI RG +D+ + ++ ++LF D Sbjct: 121 RCAPSMRFEIQPMHDAPIEAIERGYIDLLLTIDY----------AISSDHPSQILFEDDY 170 Query: 181 CVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVL-QELGRERTIAMSLPEFE 239 V D+PA+ + + H+S + ++ A ++ + ++R + + P F Sbjct: 171 VVVGAADNPAMAEPMTRQLYFELGHVSARFGKARVPAFEDWFVRRQKQQRRVEVVAPSFL 230 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 + R + ++ ++ + +PL E + L W+ N+ Sbjct: 231 SLPGLVVGT--------RRIATMHRRMAEIVVRNMPLVIREIPFDIPPIREALQWNIANN 282 Query: 300 HNPKIVWLRETIKNLYAS 317 ++ + W+ E + L A+ Sbjct: 283 NDRALRWVVEQL-ELAAT 299 >UniRef50_Q0JY95 Transcriptional regulator, LysR-family n=4 Tax=Proteobacteria RepID=Q0JY95_RALEH Length = 318 Score = 251 bits (643), Expect = 2e-65, Method: Composition-based stats. Identities = 73/313 (23%), Positives = 123/313 (39%), Gaps = 19/313 (6%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 +I + DLNLL +L QE + ++AA R+ ++ A+S L +LR DPLFV +P GL Sbjct: 1 MNIGSKDLNLLYVFHVLYQEGNASRAAARMALSQPALSHKLNRLRDELGDPLFVRAPRGL 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLD--KPHHQTPRGLKFELAAESPLMMIMLNALSKQIY 120 +PTP ++ + + + D H R + + ++L AL ++ Sbjct: 61 TPTPRAHALAPQVQRLVGDLDAFYDACAGHDYLARSEHLHIYTTDYMEQLLLPALLPRLR 120 Query: 121 QRYPQATIKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 + P + N + + + +G D+ +G +LP + L S+ Sbjct: 121 SQAPGVVLVTHNTRGELPREELEKGTCDLAIAGF---------YENLPDTFHQQRLCSED 171 Query: 180 PCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFE 239 V + +P + +LD FL H+ +D L G +R + L F Sbjct: 172 FVVLASRANPRIADGLDLDAFLACEHLLTTLTGDLNGVVDRALARQGHKRRVVAGLSSFL 231 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 + + LL R LV LP+PF V +WH R Sbjct: 232 APSRLVRGTELLLTCL--RSVAEEAVARDPDLVLLPVPFALP-----HVDMMQIWHARTD 284 Query: 300 HNPKIVWLRETIK 312 + WLR+ I+ Sbjct: 285 ADRLRRWLRQQIQ 297 >UniRef50_C6B2W9 Transcriptional regulator, LysR family n=4 Tax=Rhizobiaceae RepID=C6B2W9_RHILS Length = 334 Score = 251 bits (642), Expect = 3e-65, Method: Composition-based stats. Identities = 69/329 (20%), Positives = 133/329 (40%), Gaps = 33/329 (10%) Query: 2 KKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLG 61 ++ +DLNLL+ + +M+ER V ++ +R+N++PSA+S L +LR DPLF+ +P G Sbjct: 4 HIDLSRIDLNLLVLFETVMEERHVGRSGQRLNLSPSAISHGLGRLRMLLGDPLFLKTPKG 63 Query: 62 LSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPR--GLKFELAAESPLMMIMLNALSKQI 119 + PT + +A+ + ++ P +F + A + + L L + Sbjct: 64 VVPTDRAEELAAPIADILARVRSVVATAEPFDPAHSQRRFTIGAPDGVSSVFLPPLLDLL 123 Query: 120 YQRYPQATIKLRNWDY------------DSLDAITRGEVDIGFSGRESHPRSRELLSSLP 167 + P I +R D+L A+ ++DI + + P Sbjct: 124 AKFAPGIAISVRQLLPKQGEPSPDLAWRDALAALEARDMDIAIIPQ----------AGFP 173 Query: 168 LAIDYEVLFSDVPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGR 227 + +L+ + + R+ HP L L T+ H+ + +DN+L G Sbjct: 174 IRFASLLLYEEDFVIAARQCHPFLIDQ-TLATYCAAQHLVVSHLGDTHGFVDNLLASHGC 232 Query: 228 ERTIAMSLPEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLE 287 R +A+++P F +L + A+ D + A R+ + + + V PLP Sbjct: 233 SRRVALTVPNFMLALAVLAETDFIS-ALPRRFVEMHAARFGVVSVNPPLPL-------GR 284 Query: 288 VPFTLLWHKRNSHNPKIVWLRETIKNLYA 316 K + + WL ++ Sbjct: 285 FAINATAPKAAIRDEGVAWLVRLLQASMD 313 >UniRef50_A6ARN3 Transcriptional regulator, LysR family n=4 Tax=Vibrio RepID=A6ARN3_VIBHA Length = 305 Score = 251 bits (641), Expect = 3e-65, Method: Composition-based stats. Identities = 67/322 (20%), Positives = 119/322 (36%), Gaps = 23/322 (7%) Query: 1 MKKSI--TTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNS 58 MK I +DLNLL+ L + RSV+ AA++ V+ SA+S SL++LR FDDPLF Sbjct: 1 MKDDIQWRNIDLNLLVTFSYLYRYRSVSLAAEKSFVSQSAMSHSLSRLRVLFDDPLFERK 60 Query: 59 PLGLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALS 116 ++PT + + + L P + I L Sbjct: 61 GHKMAPTEHAHYIAPTVHHLLDSIAKDLLTKSAFLPENYAGVCRIGLTDYAEFIFAPLLY 120 Query: 117 KQIYQRYPQATIKLRNWDYDSLDAI-TRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVL 175 +I +R P+A I N + + AI ++D+ + L + + L Sbjct: 121 DEIRKRAPEAQISFINVNRSNYVAITEHDKLDVIIGS----------MPVLDDNFESQYL 170 Query: 176 FSDVPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSL 235 +++ K ++ F + + S + +D L E G R + ++ Sbjct: 171 YTEKHVCLCDKRVLKGETQLSIHAFANIEQALVSPDGSLSTQVDKKLAEHGLSRKVTVAS 230 Query: 236 PEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWH 295 F + Q + + + + Q L V P+ + +LWH Sbjct: 231 RNFLTIRNLLKQRELVAIV-PEKMAQAEGFSDDLVSVQPPIAV-------ADFDIAMLWH 282 Query: 296 KRNSHNPKIVWLRETIKNLYAS 317 ++ K +WLR+ + L Sbjct: 283 TSRNNEDKGIWLRQLVAELITG 304 >UniRef50_A8KZI9 Transcriptional regulator, LysR family n=4 Tax=Actinomycetales RepID=A8KZI9_FRASN Length = 310 Score = 251 bits (641), Expect = 3e-65, Method: Composition-based stats. Identities = 76/313 (24%), Positives = 127/313 (40%), Gaps = 20/313 (6%) Query: 6 TTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPT 65 ++LDLNLL+ L L++ERSV AA+R+ +T SAVS++L +LR DDP+ V + + PT Sbjct: 8 SSLDLNLLVALDALLEERSVNAAARRLRLTESAVSRALGRLRRAMDDPVLVRAGHRMVPT 67 Query: 66 PLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQIYQRY 123 P ++++ + ++ ++ + F + A L + L ++ + Sbjct: 68 PRALAVQAEVHALVERAHAVFTPIREPDLATLARTFTILASDALTTAIGVDLLDRLTRDA 127 Query: 124 PQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVW 183 P ++ + D + G D+ + S I EVL + Sbjct: 128 PGVRVRFLPEPSATDDPLRDGTADLEIG----------DIDSTSPEIHIEVLGEEQALAV 177 Query: 184 LRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 +R HP + H++ LD VL G RT+A+S+P +L Sbjct: 178 VRAGHPLTRGRLTPERLAAARHVTASRRGRFAGPLDEVLAARGLRRTVAVSVPSHSAALL 237 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 + A D L+ P L L LVAL L D + WH R + Sbjct: 238 LVAGSD--LVGLVPARLGR-GLLDSLGLVALDLGLDLPT-----LTIAQAWHPRYEADAP 289 Query: 304 IVWLRETIKNLYA 316 WLR +++ Sbjct: 290 HRWLRGHVRDTIR 302 >UniRef50_A3X6E2 Transcriptional regulatory protein n=1 Tax=Roseobacter sp. MED193 RepID=A3X6E2_9RHOB Length = 303 Score = 251 bits (641), Expect = 4e-65, Method: Composition-based stats. Identities = 61/321 (19%), Positives = 115/321 (35%), Gaps = 24/321 (7%) Query: 1 MKKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPL 60 M LD L L+L+ S ++AA+ + VT S +S ++ +LR F DPLFV Sbjct: 1 MNPDPFALDFASLRTLRLVYAHGSFSRAAETLGVTQSTISYTMTRLREVFSDPLFVRQGT 60 Query: 61 GLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAES--PLMMIMLNALSKQ 118 G+ PT + + E + L P E+ + +L +++ Sbjct: 61 GMVPTERCGEIVSQVGELIDRFE-TLTAQREFDPAEASVEIGLSCNFYERVTILPHVTRI 119 Query: 119 IYQRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSD 178 + + P +K+ + + R E DI + L + Sbjct: 120 LRREAPGIKLKVISSSAQGKQQLLRSESDILIGP----------IRIDDSGYYRRSLLRE 169 Query: 179 VPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEF 238 + + +P + +++ F++ P + I + V++ G M +P Sbjct: 170 EYTCVMDRSNPLAEGSLSVEDFVKAPQVVINYGGGFRSRFLVVMEAAGHVPNTVMEVPSP 229 Query: 239 EQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRN 298 + AQ D ++AT P +V++P PF E+ L W R Sbjct: 230 ANLPDLLAQTD--MIATVPFRISQM---FDDRVVSVPCPFPA------ELSIDLYWTART 278 Query: 299 SHNPKIVWLRETIKNLYASMA 319 + W+R I + ++ Sbjct: 279 HVSAPHKWVRSKIAEAASRLS 299 >UniRef50_A0KG94 Transcriptional regulator, LysR family n=5 Tax=Gammaproteobacteria RepID=A0KG94_AERHH Length = 318 Score = 250 bits (640), Expect = 5e-65, Method: Composition-based stats. Identities = 68/318 (21%), Positives = 133/318 (41%), Gaps = 33/318 (10%) Query: 15 CLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSMEQN 74 LM + SVT+AA+ + ++ A+S +L +LR +F DPL V +P G+ PTP + Sbjct: 14 AFDALMAQGSVTRAAETLFISQPAMSHALNRLRTFFGDPLLVRTPQGMLPTPRAQRLHLG 73 Query: 75 LAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQIYQRYPQATIKLRN 132 + + +++ L P +F L + +++ L +++ + P TI++R Sbjct: 74 VQQALRLLEQQLSDEEVFEPSQSKRRFVLCTTDYVECVLIPPLIQRLKRLAPAVTIEIRI 133 Query: 133 WDYDSLDA-ITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHP-- 189 +A + GE+D+ E +P + E ++ +R D P Sbjct: 134 LRDTLPEAELASGEIDLVLGFDEYMQ--------VPGYLGKETWLTEPLAGLVRADLPMA 185 Query: 190 ------------ALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPE 237 L + +L + PH+ + +LD L+ LG RTI+++ Sbjct: 186 APALAESGDEPAILAERISLAQLIEMPHVFHSPLGTSEASLDRYLKTLGFSRTISVNSQS 245 Query: 238 FEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKR 297 + + + +Q D+LL+ + L + LP + + +WH Sbjct: 246 YMSAAAIVSQSDHLLV-LPSMVAELLASHWPLKSLPLP-------EDVPDYHLNCVWHPV 297 Query: 298 NSHNPKIVWLRETIKNLY 315 ++ P +VWL++ +K L Sbjct: 298 HAQQPALVWLKDLMKELV 315 >UniRef50_B7X2W7 Transcriptional regulator, LysR family n=1 Tax=Comamonas testosteroni KF-1 RepID=B7X2W7_COMTE Length = 302 Score = 250 bits (640), Expect = 5e-65, Method: Composition-based stats. Identities = 54/299 (18%), Positives = 110/299 (36%), Gaps = 22/299 (7%) Query: 22 ERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSMEQNLAEWMQM 81 ER++++A +R++++ A+S +LA+LR +F D L + + TP + + + + E + Sbjct: 20 ERNISRAGERLHLSQPAMSNALARLRNFFGDELLASQGRQMVLTPRALGLIEPVREVLMR 79 Query: 82 SNLLLDKPHHQTP--RGLKFELAAESPLMMIMLNALSKQIYQRYPQATIKLRNWDYDSLD 139 + + P P F L + + L + +YQ+ ++LR+ + + Sbjct: 80 IDSTITTPPLFDPTESTRTFVLLLSDFTTAVFIPPLLEALYQQARGIGLELRSLNDKPAE 139 Query: 140 AITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPALHQTWNLDT 199 + +G+ D+ + LF + +H + + + Sbjct: 140 QLEQGDADLLIIPEQFAAV----------DHPRAPLFEEQYLCVTWANHSRIREELTFND 189 Query: 200 FLRYPHISICW-EQSDTWALDNV-LQELGRERTIAMSLPEFEQSLFMAAQPDNLLLATAP 257 +L H+ + A D L G R + +S P M D + Sbjct: 190 YLECGHVVANYATGQQRAAFDGWFLDRFGINRKVEVSAPSMAALPQMVVGTDRIA-TVHR 248 Query: 258 RYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWLRETIKNLYA 316 R ++ + L PL Q TL WH+ +P + W+RE + Sbjct: 249 RLALQAEKVLPIKLWPPPLEVPMLVQ-------TLQWHRHRDADPALQWMRELAFRVGR 300 >UniRef50_A1K8D7 Transcriptional regulator, LysR family n=1 Tax=Azoarcus sp. BH72 RepID=A1K8D7_AZOSB Length = 298 Score = 250 bits (639), Expect = 5e-65, Method: Composition-based stats. Identities = 68/318 (21%), Positives = 128/318 (40%), Gaps = 26/318 (8%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 +I ++DLNLL + + ER+V++AA R+ +T +VS L +LR F DPLFV + G+ Sbjct: 1 MNIQSVDLNLLKIFEAVYLERNVSRAAVRLELTQPSVSHGLTRLRLLFGDPLFVRTRSGV 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQIY 120 PT + + + + +++ LD+ H P F L +I L L + + Sbjct: 61 EPTVVADRIAGPVQQALRVLQTTLDEHAHFEPASSGRTFRLHMSDFGEVIFLPKLMRALL 120 Query: 121 QRYPQATIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 +R P I+ R + A+ G++D+ L L + L +D Sbjct: 121 ERAPGVRIETRQLGGVELAAALDSGQIDLAIGY----------LPVLDQGFECRHLLADE 170 Query: 180 PCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFE 239 V + H + F I++ L+E G + + +P F Sbjct: 171 YAVIAPR-HLIPSGGKGDNAFNGLDFIAVTSHPQTLAI----LRECGLLDRVKLWVPHFM 225 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 + A+ + +A ++ ++ LP + + L W++R + Sbjct: 226 VVPAILAERNFAAVA-PREVVHAFSPRSRVRSFPLP-------ALQRGMDVNLYWNRRYT 277 Query: 300 HNPKIVWLRETIKNLYAS 317 +P W+RE + +L+ Sbjct: 278 GDPGHAWMRELVADLFDR 295 >UniRef50_Q11CG0 Transcriptional regulator, LysR family n=1 Tax=Chelativorans sp. BNC1 RepID=Q11CG0_MESSB Length = 304 Score = 250 bits (639), Expect = 6e-65, Method: Composition-based stats. Identities = 77/322 (23%), Positives = 128/322 (39%), Gaps = 24/322 (7%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 +DL L +LM+ER+V++AA ++ + +S+ LAKLRA+FDDPL V S + Sbjct: 1 MDRWKIDLFTLRGFSILMEERNVSRAAFKLGLKQPTMSRMLAKLRAYFDDPLLVWSGGHM 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGL--KFELAAESPLMMIMLNALSKQIY 120 PTP + +E + + + L P P+ LAA + L + ++ Sbjct: 61 VPTPRAILLESEIHQVLATMERLSSSPQEFDPKTSGLTIRLAATGYTENVFLARVMSEVA 120 Query: 121 QRYPQATIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 R P +++R D A+ +GEVD + + VLF+D Sbjct: 121 VRAPGVQLEIRPPDRLHDTSALEKGEVDFLVGWNVTPA----------PVLRSRVLFTDE 170 Query: 180 PCVWLRKDHPALHQT-WNLDTFLRYPHISICWEQSDTW--ALDNVLQELGRERTIAMSLP 236 R HPAL + + ++ PH+ T L L + G + + Sbjct: 171 LVCIARAGHPALEDGNLSYERYVALPHVQFDTPSKTTTELLLHERLAQRGDRPFVQFRVQ 230 Query: 237 EFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHK 296 + A D L+ + R+ Y Q +QL + LP+ Q + WH+ Sbjct: 231 NLLTVAEIVANSD-LIATVSKRFVISYLQQYQLSIAELPVRLPVMQNR-------AWWHE 282 Query: 297 RNSHNPKIVWLRETIKNLYASM 318 R P W R + + +M Sbjct: 283 RMHREPYSHWFRSLLAEIGKTM 304 >UniRef50_A4WEP5 Transcriptional regulator, LysR family n=1 Tax=Enterobacter sp. 638 RepID=A4WEP5_ENT38 Length = 308 Score = 249 bits (638), Expect = 7e-65, Method: Composition-based stats. Identities = 66/302 (21%), Positives = 131/302 (43%), Gaps = 23/302 (7%) Query: 21 QERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSMEQNLAEWMQ 80 +E SV++AA+++++ AVS +LA+LR F+DPLFV + G+ PTP ++ L M+ Sbjct: 25 REGSVSRAAEKLHLGQPAVSNALARLREMFNDPLFVRTAGGMIPTPRAEALIAELGPLME 84 Query: 81 MSNLLLDKPHHQTPRGLK--FELAAESPLMMIMLNALSKQIYQRYPQATIKLRNWDY-DS 137 +L +P TP F L + ++ L + + P T+++ D Sbjct: 85 QMQHVLFQPASFTPASASHVFRLGMSDWVESWLMPELQAYVIREAPGITLQVSASDPFRD 144 Query: 138 LDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPALHQTWNL 197 + + E+D+ S +S + + E + S + +L + Sbjct: 145 GKQVLQREIDLAISVGQSTAAT----------LRRENIRSLNFSTLWHPEQLSLAAPLTV 194 Query: 198 DTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQPDNLLLATAP 257 ++ + H+ + + S A+D+ L G+ R + P F + + LAT P Sbjct: 195 KNYVEHDHVLVSYRGSAWSAIDDQLALQGQSRKVRYVTPHFSSLPPLLKR--IPALATVP 252 Query: 258 R-YCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWLRETIKNLYA 316 + + L +P+ + E+P +LLWHK++ ++ + WLR + + Sbjct: 253 SGLAAAWVTHYGLRCSPVPI-------QTPEIPLSLLWHKKSDNDMPLNWLRGVLGRVIK 305 Query: 317 SM 318 ++ Sbjct: 306 AL 307 >UniRef50_Q081K6 Transcriptional regulator, LysR family n=2 Tax=Alteromonadales RepID=Q081K6_SHEFN Length = 326 Score = 249 bits (638), Expect = 8e-65, Method: Composition-based stats. Identities = 72/316 (22%), Positives = 127/316 (40%), Gaps = 26/316 (8%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 K+I LDLNLL + L E+++T A+K + +TPSAVS ++ +LR +DPLFV L + Sbjct: 23 KAIQQLDLNLLKIFEALYSEQNMTLASKSLFITPSAVSHAIKRLRLVLNDPLFVRQGLQM 82 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGL--KFELAAESPLMMIMLNALSKQIY 120 PT M L + +L + P F++A L ++ L KQ+ Sbjct: 83 QPTAACQRMAPQLISALNRIRQVLQQCGEFDPLTTEQTFKIAIHEALESQIMPTLIKQVV 142 Query: 121 QRYPQATIKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 + P A I + +++ + GEVD+ ++ ++ + ++ L SD Sbjct: 143 KLIPHAKIASMSLSRENIARQLANGEVDLAI----------DVARAVNAPLAHKTLLSDP 192 Query: 180 PCVWLRKD----HPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSL 235 CV + + H + H+++ D +LQ+ G R I Sbjct: 193 FCVLIDRRQHAMHLEPSTKLTPTDYANAEHVAVSSRPIGRVMEDILLQQQGVNRHIKYRC 252 Query: 236 PEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWH 295 ++ + + L+L + + L + +P ++ L WH Sbjct: 253 QSYQTAAKIVIGS-PLMLTLPRSIAEQF-IHPDLHVCTMPFELP-------DIDTHLYWH 303 Query: 296 KRNSHNPKIVWLRETI 311 +P VWLR I Sbjct: 304 MNTETDPAFVWLRAQI 319 >UniRef50_A3Y6R5 Transcriptional regulator, LysR family protein n=2 Tax=Gammaproteobacteria RepID=A3Y6R5_9GAMM Length = 312 Score = 249 bits (638), Expect = 8e-65, Method: Composition-based stats. Identities = 69/311 (22%), Positives = 131/311 (42%), Gaps = 21/311 (6%) Query: 9 DLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLM 68 + LL L ++Q R++T +A +NVT SA+SK+L+++R F D + + T Sbjct: 3 NYKLLPALVSILQTRNLTASAAELNVTQSAMSKTLSQIREAFHDKILIREGNQFVLTQKG 62 Query: 69 VSMEQNLAEWMQMSNLLLDKPH-HQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQAT 127 ++ L + MQ + L +F +A+ + ++ +++ ++ P + Sbjct: 63 EQLKTQLPDLMQTLDGLYAPNTMELELCQRRFSIASSDYVAQAVVPMITRVMHDEAPNVS 122 Query: 128 IKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKD 187 ++ + W L + +D+ + +P + D V LR+ Sbjct: 123 LEFQAWQPSKLTELAETSIDLV----------TTIAEEVPENLQGRWCAEDELVVMLRQG 172 Query: 188 HPAL--HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMA 245 HP L Q ++LD + + HI I LD L GR+R + + +P ++ ++ + Sbjct: 173 HPILNKAQAFSLDDYCQSKHILISGGGDKNSPLDQALLAEGRQRQVLIQVPFYQAAIELV 232 Query: 246 AQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIV 305 D LL + Q H + L LP+ +Q + LLWH ++ H+P+ Sbjct: 233 LNTDALLTLPM-HIAGDFAQRHDVTLRRLPISLVPNQ-------YYLLWHTKHHHDPEHK 284 Query: 306 WLRETIKNLYA 316 W RE L Sbjct: 285 WFRELCTGLLQ 295 >UniRef50_A8FU12 Transcriptional regulator n=2 Tax=Gammaproteobacteria RepID=A8FU12_SHESH Length = 304 Score = 249 bits (637), Expect = 9e-65, Method: Composition-based stats. Identities = 74/317 (23%), Positives = 136/317 (42%), Gaps = 23/317 (7%) Query: 2 KKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLG 61 + ++ +DLNLL L+ L++ER V +AA+++NV+ SA+S +LA+LR FDD LF+ + G Sbjct: 3 ENNLAKVDLNLLKSLRALIEERHVGRAAQKMNVSQSAMSHTLARLRGVFDDSLFIRNAKG 62 Query: 62 LSPTPLMVSMEQNLAEWMQMSNLLLDKPH-HQTPRGLKFELAAESPLMMIMLNALSKQIY 120 L PT + + L ++ + LL + F + ++ L+ K+I Sbjct: 63 LEPTARAIELSDKLRFILREIDSLLAPKTLELSHIHAHFRIQTHDFILASYLSKAFKRIN 122 Query: 121 QRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 P I ++ D + D + GE+++ + L + Sbjct: 123 HEAPNILIDIKILDETAYDKLDDGELEMIIGAGLQAK----------PRFMQKRLTDENL 172 Query: 181 CVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGR-ERTIAMSLPEFE 239 L K +P L W +T RYPHI + + +G +R I Sbjct: 173 VCLLDKGNPVLK-NWTPETIFRYPHIKSSLLDDRDDPVSKYGKAMGLPKRKIGFLAETLN 231 Query: 240 QSLFMAAQPDNLLLATAP-RYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRN 298 L + + D L+A P + +Q++ L + P P + +WH+R+ Sbjct: 232 FQLPLLSDSD--LIAFLPDSIAKKGSQVYGLVVKECPFPLP-------PLTIRAMWHERH 282 Query: 299 SHNPKIVWLRETIKNLY 315 ++ W+RE I++++ Sbjct: 283 QNDVVHQWIREKIEDVF 299 >UniRef50_A8FYY5 Transcriptional regulator, LysR family n=2 Tax=Shewanella RepID=A8FYY5_SHESH Length = 331 Score = 249 bits (636), Expect = 1e-64, Method: Composition-based stats. Identities = 79/320 (24%), Positives = 130/320 (40%), Gaps = 22/320 (6%) Query: 1 MKKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPL 60 M + LDLNLL L R+V+ AA+ +N++ SA S +LA+LR DD LF+ S Sbjct: 30 MHNRLHRLDLNLLKLFSALYVHRNVSVAAESMNLSQSAFSHALARLRVQLDDELFIRSRA 89 Query: 61 GLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGLK--FELAAESPLMMIMLNALSKQ 118 + PT S+ + +AE + H P + F A ++M+ L Sbjct: 90 QMIPTRYADSIHEPVAEVLSTLGSCFAPQTHFIPHESRHEFNFAVTDFTALLMMPRLMAH 149 Query: 119 IYQRYPQATIKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFS 177 + + P I L + L A GE+D L I+ + + Sbjct: 150 LERHAPLVRINLTSRSEKLPLAAFEAGELDFALGYSHFDEVQTPL-------INQWIWWE 202 Query: 178 DVPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPE 237 D C + +L TFL HI + +D L + G +R IA+ LP Sbjct: 203 DCYCTIASDK----LERMDLKTFLSRRHILVSPWGEKIGVVDEQLSKQGLQRDIALQLPN 258 Query: 238 FEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKR 297 + F+ A + LL T P++ LP+ +P D + + K Sbjct: 259 VMNAPFVVAGSELLL--TLPKFAAQ-ALQGALPVKRFDVPVDMPTYQLKLFTY-----KP 310 Query: 298 NSHNPKIVWLRETIKNLYAS 317 + + P+ +W+RE +++L+ S Sbjct: 311 SENTPENLWMREQLQSLFKS 330 >UniRef50_A6V5Q0 MexT protein n=1 Tax=Pseudomonas aeruginosa PA7 RepID=A6V5Q0_PSEA7 Length = 308 Score = 249 bits (636), Expect = 1e-64, Method: Composition-based stats. Identities = 67/325 (20%), Positives = 123/325 (37%), Gaps = 31/325 (9%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 ++I +DLNLLL LM ERS T+AA ++VT AVS +L +LR F D LF+ S G+ Sbjct: 7 RNIARIDLNLLLTFHCLMSERSATRAAVVLHVTQGAVSAALRRLREHFGDELFIRSASGM 66 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTP--RGLKFELAAESPLMMIMLNALSKQIY 120 PT + + +AE + + +L +P F +A + + + Sbjct: 67 QPTRKAMELAPRIAEALTSISGVLAAEPEFSPHDSSYVFNIALSDDIESYLAPCIVNAAA 126 Query: 121 QRYPQATIKLRNWDYDSLDA-ITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 + + + ++D+ + + +VLFS Sbjct: 127 AEGLGVSFAFHQSNSSLWKQSLLDPDMDLVICSEPKDFNT---------SYSSQVLFSSS 177 Query: 180 PCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFE 239 R LD + H+ I ++ +D++ + G R + S F Sbjct: 178 YSCLFRPRGSMAGAAIGLDDYFAANHVRISYDGR-RGFIDDLFESAGYARRVTASFTHFA 236 Query: 240 QSLFMAAQPDNLLLATAPRYCQ-YYNQLHQLPLVALPLPFDESQQKKLEVPFTLLW---- 294 +L + ++AT P + Y+++ L +PLP + ++W Sbjct: 237 GALSTLMSGE--VIATLPTFAAETYSRMMDLHCCPVPLPVPSFRC-------FMVWDVAK 287 Query: 295 HKRNSHNPKIVWLRETIKNLYASMA 319 H + H+ WLR + + + Sbjct: 288 HNKTHHD----WLRRFVGEIAQRLG 308 >UniRef50_D0J6E9 Transcriptional regulator, LysR family n=2 Tax=Comamonas testosteroni CNB-2 RepID=D0J6E9_COMTE Length = 317 Score = 248 bits (635), Expect = 1e-64, Method: Composition-based stats. Identities = 61/304 (20%), Positives = 114/304 (37%), Gaps = 18/304 (5%) Query: 15 CLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSMEQN 74 L + RSV AA + ++PSA S +LA+LR D LF S + PTP M + Sbjct: 25 VFDALFRHRSVVAAADELAISPSACSHALARLREGLGDELFFRSGSSMQPTPRATEMAEG 84 Query: 75 LAEWMQMSNLLLDKPHHQTP--RGLKFELAAESPLMMIMLNALSKQIYQRYPQATIKLRN 132 + + + L P P F AA ++ AL +I P +++ + Sbjct: 85 ITLALHTLSDQLGDPAAFAPGSSTQSFTFAATDFTTFALMPALISRIEHEAPHVRLRVVH 144 Query: 133 W-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPAL 191 D+ + + + ++E + L +D V R+ HP + Sbjct: 145 SRHRDAYSDLVQEGAHFVMGFSDEFSPAQEGVEVLQG-------HTDAYVVVARRGHPRI 197 Query: 192 HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQPDNL 251 + ++ +L H+ + Q + +D+ L + G R IA+ LP + F+ A D L Sbjct: 198 GKRLSMAQYLAERHVVVKPWQEEKGVIDSALSKGGWTREIAIELPSVMAAPFIVANSD-L 256 Query: 252 LLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWLRETI 311 L+ + + P + + R+ +P W+R + Sbjct: 257 LITLPRMAALQLEASAAIAIFKAPFEVP-------SYTLNVYFQHRHLSSPWHRWMRARL 309 Query: 312 KNLY 315 +++ Sbjct: 310 ESIL 313 >UniRef50_Q0BCW3 Transcriptional regulator, LysR family n=30 Tax=Proteobacteria RepID=Q0BCW3_BURCM Length = 342 Score = 248 bits (635), Expect = 2e-64, Method: Composition-based stats. Identities = 65/303 (21%), Positives = 110/303 (36%), Gaps = 18/303 (5%) Query: 15 CLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSMEQN 74 L + RSV AA + ++PSA+S +LA+LR D LFV + PT + Sbjct: 50 AFDALYRHRSVAAAAHELAMSPSALSHALARLRDAIGDALFVRLGNEMQPTVRADDIATW 109 Query: 75 LAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQIYQRYPQATIKLRN 132 + + + L + P F AA +L AL +I + P+ I++ + Sbjct: 110 AGDALDTMSKGLARARRFDPAQSDRTFVFAASDYTAFAVLPALLARIERVAPRLRIRVVH 169 Query: 133 WDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPAL 191 + S+D + G +D E + FSD V HP + Sbjct: 170 SERKISIDELAAGRIDFALGYHEESTADSPGIEDFD-------WFSDDYVVIASAAHPDI 222 Query: 192 HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQPDNL 251 + LD +L H+ + +D VL LG R +A+ LP + F A+ L Sbjct: 223 RRRLTLDQYLAARHVVVTPWNESRGVVDYVLDRLGLARQVAVRLPSVLAAPFAIAES-TL 281 Query: 252 LLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWLRETI 311 L+ R Q + + P + H +++ W+R + Sbjct: 282 LMTVPNRAAQALRHAAPIRIFPAPFEIP-------RYTVKVYSHAKHARTDAHRWIRAQL 334 Query: 312 KNL 314 + Sbjct: 335 LDA 337 >UniRef50_Q3S4D5 LysR-like regular protein n=1 Tax=Polaromonas naphthalenivorans CJ2 RepID=Q3S4D5_POLNA Length = 301 Score = 248 bits (635), Expect = 2e-64, Method: Composition-based stats. Identities = 59/291 (20%), Positives = 107/291 (36%), Gaps = 18/291 (6%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 + +DLNLL+ L+ +RSV+ +A+++ +T AVS +L +LRA D LF+ + G+ Sbjct: 1 MDLREIDLNLLVVFNQLLLDRSVSTSAEKLGLTQPAVSNALKRLRAVLKDELFLRTSRGM 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTP--RGLKFELAAESPLMMIMLNALSKQIY 120 PTP + + + + + + P F LA M + L + Sbjct: 61 EPTPYALHLAEPVIYALNALQTAFTTRNSFDPLASTRTFNLAMTDIGEMYFVPPLMNALS 120 Query: 121 QRYPQATIKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 + P I + +L + + G VD+ LL +L LF Sbjct: 121 EAAPHVRISTVRPNAGNLKEDMESGTVDLALG----------LLPNLQTGFFQRRLFLHK 170 Query: 180 PCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFE 239 RK HP L F H+ I + +D +L G +R + + +P F Sbjct: 171 YVCMFRKGHPLAKSPMTLKQFTELDHVGILAANTGHGEVDGLLDRAGIKRKMRLVVPHFI 230 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPF 290 + D + + + + + + +P + P Sbjct: 231 AVGHI--TSDYR---SHRHFAGTVCRAMRSAIWSCYVPPSGPPARHSNQPL 276 >UniRef50_A6V8B0 Transcriptional regulator, LysR family n=10 Tax=Proteobacteria RepID=A6V8B0_PSEA7 Length = 310 Score = 248 bits (634), Expect = 2e-64, Method: Composition-based stats. Identities = 72/313 (23%), Positives = 126/313 (40%), Gaps = 24/313 (7%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 ++ LDLNL +++ +ER++T+AA ++++ SAVS +LA+LR DPLFV G++P Sbjct: 10 LSRLDLNLFRVFEVVYRERNLTRAAALLHLSQSAVSHALARLREQLGDPLFVRQGRGVAP 69 Query: 65 TPLMVSMEQNLAEWMQMSNLLLDKPHHQTPR--GLKFELAAESPLMMIMLNALSKQIYQR 122 TPL + + + + + + PR F L L ++L + Q Sbjct: 70 TPLAERLAPGIRDALAGLQRSVARCQSFDPRHDARTFLLNMPEQLEPLVLPDFLGHLRQV 129 Query: 123 YPQATIKLRNWDYDSLD-AITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPC 181 PQ ++ + + L + G +D E+ A+ + L D Sbjct: 130 APQVEVRCSSLHWAELKTELEAGRIDAAV----------EVARPTDAALRRQPLLEDRLW 179 Query: 182 VWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQS 241 V P + + +L H+++ + D L +LG R + + + Sbjct: 180 VMAG---PEFAGELSAERYLAAAHVAVTSRRRGICIEDLALGQLGLTRKVRQRCQHYLSA 236 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 + AQ LL T RY + N+ L+ +PL V L W ++ Sbjct: 237 ALLVAQGGYLLTLT-RRYAELLNRGLGNRLLPMPLALPA-------VALNLYWSRQADAE 288 Query: 302 PKIVWLRETIKNL 314 P WLR + L Sbjct: 289 PGGRWLRGELMEL 301 >UniRef50_A6F7C1 Transcriptional regulator n=1 Tax=Moritella sp. PE36 RepID=A6F7C1_9GAMM Length = 308 Score = 248 bits (633), Expect = 2e-64, Method: Composition-based stats. Identities = 72/288 (25%), Positives = 117/288 (40%), Gaps = 19/288 (6%) Query: 25 VTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSMEQNLAEWMQMSNL 84 VT AA+R +T SA+SK+LAKLR F DPL + T ++ LA+ + + Sbjct: 24 VTAAAQRQYITQSAMSKNLAKLREIFADPLLIKMDNKSQLTEKAKQLKPELAQILNNIDG 83 Query: 85 LL-DKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQATIKLRNWDYDSLDAITR 143 LL +F +A+ + +L A +Y P + L WD +L A+ R Sbjct: 84 LLMTGGFDPLQSQREFTIASTDYVTDYILPAALAHLYLHAPNIKLNLTYWDKFTLAAMER 143 Query: 144 GEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPALHQTWNLDTFLRY 203 GE+D+G ++ + Y L D +R+ HP ++ L + +Y Sbjct: 144 GEIDLG----------ATIIRPEHKHLSYLPLEKDNYVCIMRQGHPLENEVLTLANYTQY 193 Query: 204 PHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQPDNLLLATAPRYCQYY 263 PH I +D L G R +A+ +P + + + A+ D+LL Sbjct: 194 PHSIITSGADKASDIDVALSAQGLFREVALRIPSYSSAFSILAKTDHLL-TIPNSIADKL 252 Query: 264 NQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWLRETI 311 Q LP+ Q ++WH R H+ WLR+ + Sbjct: 253 IIGEQFIRKDLPIKLPILQA-------AIIWHPRFDHDLAHKWLRDEL 293 >UniRef50_B5ZKB2 Transcriptional regulator, LysR family n=2 Tax=Gluconacetobacter diazotrophicus PAl 5 RepID=B5ZKB2_GLUDA Length = 317 Score = 248 bits (633), Expect = 3e-64, Method: Composition-based stats. Identities = 83/323 (25%), Positives = 135/323 (41%), Gaps = 21/323 (6%) Query: 1 MKKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPL 60 M DLNLL + +L++E SVT AA+R+ V+ + +S++L++LR F D + V S Sbjct: 1 MAHVAHGYDLNLLQAMNVLVEESSVTGAAERLQVSAATMSRTLSRLRETFHDAILVQSGR 60 Query: 61 GLSPTPLMVSMEQNLAEWMQMSNLLLDKPH--HQTPRGLKFELAAESPLMMIMLNALSKQ 118 + PTP + M+ +++ + + L H T F + A ++ AL + Sbjct: 61 HMVPTPRALQMQPRVSQILSAISDLYRPRHALDFTGLTPTFRIRAADVVIGSYAEALLRA 120 Query: 119 IYQRYPQATIKLR-NWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFS 177 + P T+ + D D + +G +D+ + L I + LF Sbjct: 121 LRADCPDTTLIFTAESNSDDSDFLRQGGIDLYIGAT----------ALLRPEIMRQTLFE 170 Query: 178 DVPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQEL-GRERTIAMSLP 236 +R HP L + Y HI++ +D VL + G ERT+A+ L Sbjct: 171 SRFRGVVRAGHPILLGKITPQALVAYEHIAVSRRGRRRGPIDEVLADQYGLERTVALLLT 230 Query: 237 EFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHK 296 F +L +Q D L+ AP L +L L PLP D V WH Sbjct: 231 SFYAALQGLSQTD--LILPAPDILTDAAMLDRLGLYGFPLPLDL-----EPVTIFQAWHP 283 Query: 297 RNSHNPKIVWLRETIKNLYASMA 319 R+ + WLR T+ + + A Sbjct: 284 RHDTDQVHQWLRRTVLRVMSPRA 306 >UniRef50_A9R140 Substrate-binding transcriptional regulator, LysR family n=34 Tax=Enterobacteriaceae RepID=A9R140_YERPG Length = 322 Score = 248 bits (633), Expect = 3e-64, Method: Composition-based stats. Identities = 58/312 (18%), Positives = 123/312 (39%), Gaps = 21/312 (6%) Query: 4 SITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLS 63 + ++DLNLL +MQ ++VT+AA+ + ++ AVS ++A+L+ F+D LFV G+ Sbjct: 25 HLRSVDLNLLTVFDAVMQMQNVTRAAQSLGMSQPAVSNAVARLKVMFNDELFVRYGRGIQ 84 Query: 64 PTPLMVSMEQNLAEWMQMSNLLL-DKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQR 122 PT + + + +Q+ L F L+ SPL + + + +++ Q Sbjct: 85 PTARARQLFGPVRQALQLVQNELPGAGFEAKNSERLFNLSICSPLDVRLAAQIVQRVKQS 144 Query: 123 YPQATIKLRN-WDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPC 181 P + +++ + + + E + E LF D Sbjct: 145 APNVQLVIKSYLNDNIEHQLRYQETEFVIGYTEFDR----------PDFHRIPLFKDELV 194 Query: 182 VWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQS 241 + + KDHP ++ + + L H + ++ + ++IA + Sbjct: 195 LAVSKDHPRINDSITENQLLSESHAVVSLDKKG-SFSEPYYDSTTSTQSIAYESTDMNSV 253 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 L + +Q + +A + Y++ L L++LP + L WH+ + Sbjct: 254 LNIVSQTYFVAIA-PRWLVKTYSEALNLKLISLP-------WENTSRACYLTWHESTDRD 305 Query: 302 PKIVWLRETIKN 313 W++ + Sbjct: 306 KGHQWMKALLGQ 317 >UniRef50_Q15XK7 Transcriptional regulator, LysR family n=1 Tax=Pseudoalteromonas atlantica T6c RepID=Q15XK7_PSEA6 Length = 302 Score = 247 bits (632), Expect = 3e-64, Method: Composition-based stats. Identities = 60/316 (18%), Positives = 134/316 (42%), Gaps = 21/316 (6%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 LDLNLL+ L +L++E+++T++A+R++++ SA S L++LRA+F+D L V + Sbjct: 1 MRFEQLDLNLLVALDILIEEQNITRSAERLHLSQSATSGILSRLRAFFEDDLLVQIGKKM 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLL--DKPHHQTPRGLKFELAAESPLMMIMLNALSKQIY 120 PTP + ++ +A + + K ++ F++ A ++ ++L+ + ++ Sbjct: 61 QPTPFALELQGPVAGVLATVRGSIIGKKANNPEHSERHFKIIASDYVIQVLLSHVVAEVA 120 Query: 121 QRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 + P+ T + ++ +++G D+ + L SD Sbjct: 121 KLAPKVTFEFLTPFAHEMNILSKGGADMMVAPEAIILS----------NYSSASLISDEL 170 Query: 181 CVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVL-QELGRERTIAMSLPEFE 239 ++ + + F H+S+ + + +++ L L R IA+ +F Sbjct: 171 VCIADINNTEVGDELTFEQFNAMGHVSVGFARVSLLSIEQWLINTLETNRKIAVITSDFS 230 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 ++ + + + + + Q + V LP ++ +L+WH Sbjct: 231 TMVYALLNTNRIAI-LPRHFVDMHIQREAVKTVKLPFSPPNLKE-------SLMWHPTLD 282 Query: 300 HNPKIVWLRETIKNLY 315 ++P WLRE I Sbjct: 283 NDPMHRWLREKIIECA 298 >UniRef50_A6UK78 Transcriptional regulator, LysR family n=2 Tax=Sinorhizobium RepID=A6UK78_SINMW Length = 310 Score = 247 bits (632), Expect = 4e-64, Method: Composition-based stats. Identities = 76/300 (25%), Positives = 124/300 (41%), Gaps = 20/300 (6%) Query: 21 QERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSMEQNLAEWMQ 80 +ERSVT+AA R+ ++ A S++LA+LR F D + V+ P G T M +L + Sbjct: 28 EERSVTRAATRLGMSQPAASRALARLRVLFSDAILVDGPGGYLLTARAEEMRPSLRNTLA 87 Query: 81 MSNLLLDKP-HHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQATIKLRNWDYDSLD 139 N LLD L ++ L + ++ P +++ + L+ Sbjct: 88 GVNELLDGRTFDPMRATGAVRLLMLDLEAAVLAPRLISSLAEQAPAVDLQVVSPGLRPLE 147 Query: 140 AITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPALHQTWNLDT 199 A+ VD ++ P I L+ D +R DHPA Q L Sbjct: 148 ALEADAVDAVIG----------VVDEAPAGIRKRKLYQDGFVTLMRADHPAAGQKLTLQR 197 Query: 200 FLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQPDNLLLATAPRY 259 FL H+ + + +D +L LGR+R + + +P F ++ +AA+ D L+ T P Sbjct: 198 FLELDHVVVSITGTGPAWVDEILARLGRQRRVKVRVPSFFAAVEIAARSD--LVITLPSS 255 Query: 260 CQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWLRETIKNLYASMA 319 + + + PL V +L WH RN P+ VWLR TI + + Sbjct: 256 LARTADMRRFVMTPPPLDL-------GSVVMSLAWHGRNQDAPRHVWLRRTIVTAVSDIG 308 >UniRef50_A8TNA4 Transcriptional regulator MexT n=1 Tax=alpha proteobacterium BAL199 RepID=A8TNA4_9PROT Length = 299 Score = 247 bits (632), Expect = 4e-64, Method: Composition-based stats. Identities = 68/315 (21%), Positives = 115/315 (36%), Gaps = 24/315 (7%) Query: 7 TLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTP 66 LDLNLL L+M+ERS+T+AA+R++V AVS +LA+LR+ D LFV S + PT Sbjct: 2 NLDLNLLRVFALVMRERSLTRAARRLSVGQPAVSHALARLRSELGDALFVRSGRRMEPTE 61 Query: 67 LMVSMEQNLAEWMQMSNLLLDKPHHQTP--RGLKFELAAESPLMMIMLNALSKQIYQRYP 124 S +A ++ + L P F + L M L +R P Sbjct: 62 WAKSFYAEIAPALERIDASLMSSRAFDPGSTDRTFRIGMSDDLQMAFLPQFLAAFTERMP 121 Query: 125 QATIKLRNWDYDS-LDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVW 183 A + ++ +Y + + + R +V + L +LP A + + Sbjct: 122 NARLVVQQTNYTTAAEMLDRRDVSLVVGY----------LDTLPAAAKTRTISRVSYRMI 171 Query: 184 LRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 + + + L + H + + +D LQ+ G R I +SL F + Sbjct: 172 MDSRN---AEVTTLADYCAGKHALVTFAGDLIGYVDETLQQRGVARDIRLSLSNFAVVPY 228 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 L+ L + LP E ++ W +P Sbjct: 229 ALRGTGY-LVTIPQYLAAVLANETGLVMAQLPFESP-------EFDVSMAWSPTVDSDPG 280 Query: 304 IVWLRETIKNLYASM 318 +R+ I + Sbjct: 281 ERIIRDLIVDTVGGF 295 >UniRef50_A6W2N0 Transcriptional regulator, LysR family n=1 Tax=Marinomonas sp. MWYL1 RepID=A6W2N0_MARMS Length = 310 Score = 247 bits (631), Expect = 4e-64, Method: Composition-based stats. Identities = 71/317 (22%), Positives = 134/317 (42%), Gaps = 19/317 (5%) Query: 4 SITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLS 63 S+ LDL L L L++ER+V +AA R+ ++ SA+S+ L +LR FDDPLF+ + G+ Sbjct: 5 SLQHLDLKSLTGLLYLLEERNVGRAADRLYLSQSAMSRLLNRLRDAFDDPLFIRTSKGMV 64 Query: 64 PTPLMVSMEQNLAEWMQMSNLL-LDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQR 122 PT +++E L ++ L + F + + A+++Q Y+ Sbjct: 65 PTSKALALEAPLKLMLEQLAGLWTESEFQPQSSYRTFRMQTTHYQAQAYMPAIAEQFYRE 124 Query: 123 YPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCV 182 P A+++ SL +D+ LP + + +L + Sbjct: 125 APFASLETSTLTETSLLNQAEHSLDLALCSDYI---------QLPNSFEKHLLGREKFRC 175 Query: 183 WLRKDHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQS 241 + +H + LD +L Y H+ + S+ D +L E RER A P + Sbjct: 176 VMSANHALAMKDSITLDDYLAYSHVLVNLGGSNPVISDALLGERARERHFAFRTPYMLAA 235 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 L + +LL++ + + + Q L + LP+ F + + W K ++ Sbjct: 236 LETVGRT-SLLMSNSGLLPERFQQQFGLVIKDLPMDFPF-------IHYYSSWPKSVEND 287 Query: 302 PKIVWLRETIKNLYASM 318 P ++W R+ + + + Sbjct: 288 PGVIWFRDICERVVKGL 304 >UniRef50_Q5E2I6 DNA-binding transcriptional activator n=65 Tax=Gammaproteobacteria RepID=Q5E2I6_VIBF1 Length = 323 Score = 247 bits (631), Expect = 5e-64, Method: Composition-based stats. Identities = 62/318 (19%), Positives = 123/318 (38%), Gaps = 22/318 (6%) Query: 2 KKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLG 61 ++ + +DLNLL +MQE+++T+AA+ + ++ AVS ++++L+ F+D LF+ G Sbjct: 15 EQILRGVDLNLLTVFDAVMQEQNITRAAQNLGMSQPAVSNAVSRLKLMFNDELFIRHGRG 74 Query: 62 LSPTPLMVSMEQNLAEWMQMS-NLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIY 120 + PT + + + +Q+ N L +F+L+ SP + + K I Sbjct: 75 IQPTQRARQLFAPMRQALQLVKNELPSSTFSPETSMRQFKLSICSPSDIRFAPRIMKDIQ 134 Query: 121 QRYPQATIKLR-NWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 + P ++KL + D + EVD + LF+D Sbjct: 135 NKAPHISLKLSGEHEPDIAQKLRYQEVDFVIDY----------VRFDEPGFMSTELFTDE 184 Query: 180 PCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFE 239 V +HP L N + H + D++ + E+ A Sbjct: 185 LVVVASVNHPRLQNGINKEQLASEKHAVPARIANTKGFADHLYVDSLYEQ--AYKGASIS 242 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 L++ +Q + + +A QL ++ LP+ + L WH Sbjct: 243 NILYVVSQSELITVA-PKWLVNSMPNRDQLMVLPLPIE-------SKGISGYLSWHDSYQ 294 Query: 300 HNPKIVWLRETIKNLYAS 317 + +W+R+ + + Sbjct: 295 KDKGHIWMRDQLMLICGE 312 >UniRef50_A8IJ97 Putative transcriptional regulator n=1 Tax=Azorhizobium caulinodans ORS 571 RepID=A8IJ97_AZOC5 Length = 324 Score = 247 bits (631), Expect = 5e-64, Method: Composition-based stats. Identities = 78/320 (24%), Positives = 124/320 (38%), Gaps = 23/320 (7%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 I D LLL + LM T AA+R+ +T S VS +L +LR DPLF P GL Sbjct: 6 NHIRRFDGALLLVFRELMATGQTTAAARRLGLTQSTVSHALRRLRDLTGDPLFQRRPDGL 65 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPR--GLKFELAAESPLMMIMLNALSKQIY 120 +PTP + + E +++S L +P P F +A + ++ L+ + Sbjct: 66 TPTPRAHELLPIVVEMLRLSQALKGEPGEFDPAASTRHFRIAGPDIVSTVLAGPLAHRFA 125 Query: 121 QRYPQATIKL-RNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 Q P A + +L+A+ RGE+D+ S+P L+ + Sbjct: 126 QHAPNARLSFGFIVGAAALEALRRGEIDMAIG----------HFPSVPRGFAASTLWEEE 175 Query: 180 PCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFE 239 RK HP +L +L H+ + + T +D VLQ LG R + S P F Sbjct: 176 FVAIARKGHPRF-PPLDLAGYLAADHVLVSFSGRFTGVVDRVLQPLGLARRVVASFPLFL 234 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 AQ D + A C+ + + L + +P+ + Sbjct: 235 SVFDAVAQSDAVA-AVPYSLCERHAETFGLARLPMPIAVPGFPIVSVRRAGV-------- 285 Query: 300 HNPKIVWLRETIKNLYASMA 319 + WL I+ + A A Sbjct: 286 PDGGYEWLEALIRRMVAEYA 305 >UniRef50_B1LYW9 Transcriptional regulator, LysR family n=10 Tax=Rhizobiales RepID=B1LYW9_METRJ Length = 333 Score = 247 bits (631), Expect = 5e-64, Method: Composition-based stats. Identities = 79/299 (26%), Positives = 128/299 (42%), Gaps = 21/299 (7%) Query: 22 ERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSMEQNLAEWMQM 81 ERSVT+AA R+ + SA+S SLA+LR FDD L +P G+ PTP + + + L ++ Sbjct: 46 ERSVTRAAARVGIGQSAMSSSLARLRRLFDDELLTRAPDGMRPTPRALRIAEPLRSTLRQ 105 Query: 82 SNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQIYQRYPQATIKLRNWDY-DSL 138 L+ + P F ++ + ++ L Q+ + P + LR+ D L Sbjct: 106 VQALVHREEQFDPATVARTFTVSLPDSVEALLGPRLIAQLRRDAPGIRLLLRSVDRTRIL 165 Query: 139 DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPALHQTWNLD 198 D + VD+ L S L +L+ D V L LD Sbjct: 166 DELDADRVDLAIG----------LFSEGQLHHKQRLLYRDSYVVLFNAALIGLEPPIGLD 215 Query: 199 TFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQPDNLLLATAPR 258 +LR+PH+ ++ +D+ L +GR RT+A++ P F FM ++ R Sbjct: 216 DYLRFPHVLTSLRETAHGVVDDALALIGRSRTLAVTTPRFLVVPFMVRAA-PVIATMHAR 274 Query: 259 YCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWLRETIKNLYAS 317 + L + +P+P D +V ++LWH H+P WLRE + L Sbjct: 275 LATSFASALALSVSPVPVPLD-------DVSVSMLWHASYDHDPAHRWLRELLVRLAHE 326 >UniRef50_Q1GFT2 Transcriptional regulator, LysR family n=1 Tax=Ruegeria sp. TM1040 RepID=Q1GFT2_SILST Length = 299 Score = 246 bits (629), Expect = 9e-64, Method: Composition-based stats. Identities = 64/313 (20%), Positives = 121/313 (38%), Gaps = 21/313 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +D++LL +M+ER+VT AA+R+ + S VS +LA+LR D LF+ + G+ PT Sbjct: 3 VDISLLRVFHAVMEERNVTAAARRLGQSQSTVSAALARLRDALGDELFLRARYGVEPTEK 62 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTP--RGLKFELAAESPLMMIMLNALSKQIYQRYPQ 125 + + ++A + P +F L +++ L++ Q P+ Sbjct: 63 ALQIAPDIAAGLDRLEQAFRAAEPFDPIRSTRRFRLLLGPYAEVVLAPDLAEAFAQHAPK 122 Query: 126 ATIKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 A ++L D + D+ P + LFSD + Sbjct: 123 AQLELAPIGPDLDPRKLAAQSFDLAIGRFAPP----------PDDLVVSDLFSDGFRCIV 172 Query: 185 RKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 + +LD + PH+ + + + G +R A+++ F + Sbjct: 173 APAALPEGASLDLDLYETLPHVIVAPPGRWRTGVHKLTAASGLQRNTAVAVSHFLTAAPT 232 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 A+ + + R + L VA+P + P + WH +P+ Sbjct: 233 VARINGIA-TVPARIAAMVAAPYGLRNVAVP-------RDLGTFPTQIAWHPHQRRDPRH 284 Query: 305 VWLRETIKNLYAS 317 VWLR+ + +L A+ Sbjct: 285 VWLRDLLLSLTAT 297 >UniRef50_C5CV67 Transcriptional regulator, LysR family n=1 Tax=Variovorax paradoxus S110 RepID=C5CV67_VARPS Length = 300 Score = 246 bits (628), Expect = 9e-64, Method: Composition-based stats. Identities = 72/314 (22%), Positives = 117/314 (37%), Gaps = 24/314 (7%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 ++ +DLNLL L LM+ER V++AA+R+++ AVS +LA+LR DPL V + P Sbjct: 6 LSRIDLNLLTVLAALMRERHVSRAAQRLHLGQPAVSHALARLRELTGDPLLVRQGRVMEP 65 Query: 65 TPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGL--KFELAAESPLMMIMLNALSKQIYQR 122 T +++ Q L ++ P F + L + ML L + + Sbjct: 66 TERALALMQGLGPALEQIEATFRAQADFEPARAAPVFRIGLTDDLQIAMLPRLLRALSVE 125 Query: 123 YPQATIKLRNWDYDSLDA-ITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPC 181 P+A + Y + + G+V L LP + + Sbjct: 126 APRARLVTLTVCYRNAARYLDEGQV----------SAVMTFLKDLPAGAKIRKVRTARFA 175 Query: 182 VWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQS 241 + R D LD + R H+ + + +D L ELGR+R +A S+P+F Sbjct: 176 LL-RAD--TAAARLTLDDYCRRRHVLVTYAGDLCGTVDETLNELGRQREVAFSVPQFGSL 232 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 + A + LL + L ALP L W + Sbjct: 233 PAVLAGTE-LLATVPEHVALALSAQGGLRCEALPFESP-------SYQIKLAWRAVTDKD 284 Query: 302 PKIVWLRETIKNLY 315 WLR + + Sbjct: 285 AAETWLRRAMLRAF 298 >UniRef50_A8H854 Transcriptional regulator, LysR family n=1 Tax=Shewanella pealeana ATCC 700345 RepID=A8H854_SHEPA Length = 303 Score = 246 bits (628), Expect = 9e-64, Method: Composition-based stats. Identities = 75/318 (23%), Positives = 141/318 (44%), Gaps = 23/318 (7%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 ++ LDLNLL ++L++ ++ KAA+ ++++ AVS++L +LR +F D LFV S GL P Sbjct: 1 MSQLDLNLLKVFRVLIEVKNTRKAAEILHLSQPAVSRALRRLRDYFGDELFVRSAHGLEP 60 Query: 65 TPLMVSMEQNLAEWMQMSNLLLDKPHHQTPR--GLKFELAAESPLMMIMLNALSKQIYQR 122 T + + L E M L+ P+ K +A + ++ L K + ++ Sbjct: 61 TSKALVIGSRLPEAMDQLFEALNVKEEFEPQFYSGKVTIAVNGFIAHWLVPPLIKALTEK 120 Query: 123 YPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCV 182 P I + NW+ + D I GE+ + + L + E L SD V Sbjct: 121 APNMEIYMANWEESTSDKIINGEIQLAINYFPL---------ELTKQLIQEKLGSDDFVV 171 Query: 183 WLRKDHPALHQTWNLDTFLRYP---HISICWEQSDTWALDNVLQELGRERTIAMSLPEFE 239 RKDHP + + F +YP HI W ++ + ++ L++LG + + +S + Sbjct: 172 LCRKDHPFQKEVIGAEDFPKYPLASHIVPGWNETKNFTVE-ALKKLGYKPRVQLSSSKMN 230 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 L D LL + + + + ++ + ++ F L++ ++ Sbjct: 231 IILSSLELTDMLLPC-SKLLAKTLSD--RFRIIDIDPELEQPSS-----DFALIYANKSR 282 Query: 300 HNPKIVWLRETIKNLYAS 317 NP WL++ + + S Sbjct: 283 RNPLDEWLQQCVIDCVNS 300 >UniRef50_B2JTT0 Transcriptional regulator, LysR family n=3 Tax=Burkholderiaceae RepID=B2JTT0_BURP8 Length = 324 Score = 245 bits (627), Expect = 1e-63, Method: Composition-based stats. Identities = 72/339 (21%), Positives = 132/339 (38%), Gaps = 41/339 (12%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 S +DLNLL + ++R++ A KR++++ SA+S +LA++R D LFV + G+ Sbjct: 1 MSADRIDLNLLRVFDAIFEDRNLGLAGKRLHLSQSAISHALARMREVLGDDLFVRTGKGM 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLD-KPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQ 121 PT + M + +Q L KF +AA + ++L LS++++ Sbjct: 61 EPTMRALRMAAQVRGALQQIRAALGVDEFDPRVAQRKFVVAANDYITSLLLGRLSQRLHA 120 Query: 122 RYPQATIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 P + +R D I G +D+ + + +P + L+ Sbjct: 121 EAPLVDLVVRPSTRLDLAGQIDVGRIDMAIG----------IFADVPTRLRGTTLWEQTD 170 Query: 181 CVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRER----------- 229 V L +DHP + D L +P I+I + A+ + E G R Sbjct: 171 VVLLHRDHPIAGRAVTRDDMLAHPLIAISQGGEEEGAVGGFIVERGLARQSEMFNRDALN 230 Query: 230 ----------TIAMSLPEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFD 279 + MS+ + D L L + + +L + A P Sbjct: 231 RAFDDPAETPRMRMSVAHSLALPALLRHSDMLALV-PSSLGRELQRYGELKMCATP---- 285 Query: 280 ESQQKKLEVPFTLLWHKRNSHNPKIVWLRETIKNLYASM 318 +V +WH+RN +P + WLR+ + ++ + Sbjct: 286 ---YACPDVAVRAVWHERNDADPALQWLRQQLADVARQV 321 >UniRef50_A4XRF8 Transcriptional regulator, LysR family n=2 Tax=Pseudomonas RepID=A4XRF8_PSEMY Length = 320 Score = 245 bits (627), Expect = 1e-63, Method: Composition-based stats. Identities = 66/319 (20%), Positives = 120/319 (37%), Gaps = 24/319 (7%) Query: 2 KKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLG 61 + + D+NLL+ + +M E++V++ +++ + AVS +L +LR FDDPLF+ + Sbjct: 4 RNDLRRADINLLVVFETMMHEQNVSRVGEKLFLGQPAVSAALGRLRHLFDDPLFIRTGRV 63 Query: 62 LSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTP--RGLKFELAAESPLMMIMLNALSKQI 119 + PT + NL + L K P F + + +L L + + Sbjct: 64 MEPTSRAQEIFSNLTPALDSIAAALGKCQTFDPTTSEATFHIGLSDDVEYALLPTLLRHL 123 Query: 120 YQRYPQATIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSD 178 P + +R D + GE+ +G S LP + L S Sbjct: 124 RVDAPNIRLVVRRADQWQLPQLLASGEISLGISHAL----------QLPANARSKHLRSI 173 Query: 179 VPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEF 238 P + R D L+ F R PH + + D L LGR+R + +++P+F Sbjct: 174 RPMLL-RADS--QAGALTLEEFCRRPHAVVSSMGNVIENADRALHSLGRQRKVVLAVPQF 230 Query: 239 EQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRN 298 + + + Q + L A+P+ + +++W Sbjct: 231 SALPMLLEGSSMIAIV-PEYVAQAMSGSGGLRAEAVPVVLPQQ-------ELSMVWRGAA 282 Query: 299 SHNPKIVWLRETIKNLYAS 317 +P WLR L + Sbjct: 283 HSDPGERWLRSRCSALLGA 301 >UniRef50_Q4KKE5 Transcriptional regulator, LysR family n=27 Tax=Proteobacteria RepID=Q4KKE5_PSEF5 Length = 308 Score = 245 bits (627), Expect = 1e-63, Method: Composition-based stats. Identities = 65/298 (21%), Positives = 120/298 (40%), Gaps = 19/298 (6%) Query: 22 ERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSMEQNLAEWMQM 81 E SV AA+R+N++P+A+S++L ++R DP+ V + GL PTP + + + + ++ Sbjct: 18 EGSVVGAARRMNLSPAAMSRTLTRIRDALGDPVLVRAGRGLVPTPKALELRSQVRDVVEQ 77 Query: 82 SNLLLDKPHHQT--PRGLKFELAAESPLMMIMLNALSKQIYQRYPQATIKLRNWDYDSLD 139 + L+ +F + A + + L + ++ P ++ + Sbjct: 78 AALVFRSADKVDLGSLQRRFNVRANDFFVGVYGGRLIDTLERQAPLCELRFVPEGDGDDE 137 Query: 140 AITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPALHQTWNLDT 199 A+ G +D+ S L + + LF+ +R+ HP L + + Sbjct: 138 ALREGRIDLRISNT----------RPLTPEVKVQNLFTTAFVGLVREGHPLLDEDITAER 187 Query: 200 FLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQPDNLLLATAPRY 259 F +PHIS+ +D L E G ER + + P F ++FM D +L Sbjct: 188 FAAFPHISMSRRGIARGPIDAALAEQGLERRVPLIAPSFHAAMFMLPDSDLILPVPQETL 247 Query: 260 CQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWLRETIKNLYAS 317 +L LP+ + T WH R +P W RET++ + Sbjct: 248 LSVSRLGLRLRSFVLPISLPT-------LVLTQAWHPRYDKDPAHKWFRETLRTSCQA 298 >UniRef50_A1SEI3 Transcriptional regulator, LysR family n=1 Tax=Nocardioides sp. JS614 RepID=A1SEI3_NOCSJ Length = 300 Score = 245 bits (627), Expect = 2e-63, Method: Composition-based stats. Identities = 68/318 (21%), Positives = 126/318 (39%), Gaps = 20/318 (6%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 ++T +DLNLL+ L L+ ERSVT+AA+R++V A+S +L +LR F D LFV + + Sbjct: 1 MNVTNVDLNLLVALDALLTERSVTRAAERLSVGQPAMSATLGRLRKLFGDQLFVRTGGDM 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQIY 120 PT + ++ + E ++ +LD P F + A + ++++ L +++ Sbjct: 61 VPTAMGQALVGPVTEAIRAVQAVLDVVDAFDPTTDRRTFTVMASDYVGLVLIRPLVRRLS 120 Query: 121 QRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 P+ + ++ D I +G VD+ E + + E LF D Sbjct: 121 VEAPEVRLIVQPVAADYEAMIRQGRVDLAILPGEMLDPA--------PELRRESLFQDRY 172 Query: 181 CVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQ 240 + D ++ ++ + ++ ++ D L L + +S Sbjct: 173 VFAVDADDASIGDRLTIEQLASHRRLA-TGDRELPALGDRQLDGLTLDPAAELSTQTSLL 231 Query: 241 SLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 + F A L++ T R + V PLP + L W R Sbjct: 232 APFFVAGT-GLIILTLQRLVDELG-WAGIRAVEPPLPL-------RTIDECLFWSIRRDS 282 Query: 301 NPKIVWLRETIKNLYASM 318 + WLR+ I + Sbjct: 283 DVGHRWLRQEILTTAQQL 300 >UniRef50_B5ZKC3 Transcriptional regulator, LysR family n=7 Tax=Proteobacteria RepID=B5ZKC3_GLUDA Length = 323 Score = 245 bits (626), Expect = 2e-63, Method: Composition-based stats. Identities = 67/299 (22%), Positives = 111/299 (37%), Gaps = 22/299 (7%) Query: 21 QERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSMEQNLAEWMQ 80 E SV +AA R+N++ A+S+ L +R DP+FV + L PTP +M + E + Sbjct: 28 TEGSVARAAARMNLSTPAMSRILGHIRDLTGDPIFVRAGRSLVPTPRAEAMRLPVRELVA 87 Query: 81 MSNLLLDKPHHQTPR--GLKFELAAESPLMMIMLNALSKQIYQRYPQATIKLRNWDYDSL 138 + +L F L A + L+ + P+ ++ +S+ Sbjct: 88 RARSILGNAGDLDLDRLDRTFTLRATDSFIGSFGPRLAGHLTTLAPKVRLRFVPQRDESV 147 Query: 139 DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPALHQTWNLD 198 D + G+VD+ +S I + + SD +R HP Sbjct: 148 DDLREGQVDLDIGA----------ISHTGPEIMTQTILSDRFVGVVRPGHPLSSGRITSA 197 Query: 199 TFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQPDNLLLATAPR 258 F R HIS +D L L R + +P F +L A Q + L+A P Sbjct: 198 RFSRQRHISASRRGRMHGPVDQALGSLNLSRNVVTIVPTFSDALLFARQSE--LVAVVPD 255 Query: 259 YCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWLRETIKNLYAS 317 + +V+ PLP + + WH R + WLR ++ + A Sbjct: 256 RLTEVARQ---DMVSFPLPVETGLLI-----ISQAWHPRFQADATHQWLRACVREICAE 306 >UniRef50_A7HRT9 Transcriptional regulator, LysR family n=1 Tax=Parvibaculum lavamentivorans DS-1 RepID=A7HRT9_PARL1 Length = 315 Score = 244 bits (624), Expect = 3e-63, Method: Composition-based stats. Identities = 62/317 (19%), Positives = 118/317 (37%), Gaps = 22/317 (6%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 +I LDLNLLL + ERS++KAA ++ +T AVS +L +LR + D LF S G+ Sbjct: 1 MNIRELDLNLLLVFNAIYTERSISKAAVKLGITQPAVSNALRRLRNFTGDTLFYKSGSGV 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQIY 120 +PT ++ + + L P F + + ++ AL Sbjct: 61 APTRAAATLAIPIGHALDTVERGLSSVRSFDPATSRRTFRIGVNDIIHDALVPALVGYTR 120 Query: 121 QRYPQATIKLR-NWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 + P ++ +L+ + GE+D+ ++ ++ ++ D Sbjct: 121 REAPNLILEFVQQVGDRALEMLKGGEIDMALLPNF----------AIDDSLVSTKVWDDS 170 Query: 180 PCVWLRKDHPALHQ-TWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEF 238 + + ++HP +D + Q +D+ + G ER A ++ + Sbjct: 171 FAIIVARNHPIAKSNRLTVDDIRELRFVVTTHVQRLRTFIDSAFRANGMERVTACAVADT 230 Query: 239 EQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRN 298 + A D L + YN L + LP + Q + + W K Sbjct: 231 HNIYPLVAVSD-LAACVGRFHADRYNTDGSLVMFDLPFELPKIQGR-------IAWAKEA 282 Query: 299 SHNPKIVWLRETIKNLY 315 + W+RE + + Sbjct: 283 DEDEGHRWVRERVLEIL 299 >UniRef50_A9BZQ9 Transcriptional regulator, LysR family n=1 Tax=Delftia acidovorans SPH-1 RepID=A9BZQ9_DELAS Length = 323 Score = 244 bits (623), Expect = 4e-63, Method: Composition-based stats. Identities = 72/312 (23%), Positives = 132/312 (42%), Gaps = 25/312 (8%) Query: 9 DLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLM 68 DLNLL+ L L+ SVT+AA R++++ A+S +LA++R F DP+ V + L PTP Sbjct: 6 DLNLLIALDALLSTGSVTQAAGRMHLSTPAMSHTLARIREAFGDPILVRAGRSLVPTPRA 65 Query: 69 VSMEQNLAEWMQMSNLLLDKPHH--QTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 +++ + + + + L D +F + A + ++ +LS+ + P A Sbjct: 66 LALAEPVRALLAQARALQDPVDAGGLAGLRRRFVVRAPEGIAVVFGASLSRALEAEMPLA 125 Query: 127 TIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRK 186 +++ + A+ G +D+ S+ + V+ +R Sbjct: 126 SLQFLPETHADPGALREGRIDLDVGS----------FRSMDPETESLVISEQTLVGVVRA 175 Query: 187 DHPALH-----QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQS 241 HP L Q + F H+ I ++ +D L+ LG +R +A+ +P + Sbjct: 176 GHPLLKSARKSQRPSAAQFAAARHVGITQRPGESSPVDAALEALGLQRQLALLVPSSFSA 235 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 L A++ D L+ R L + ALP+ P + WH R+ + Sbjct: 236 LIAASRTD-LVACVPTRTAHGMAASLGLVVFALPIEVQVQ-------PMRMAWHPRHQAD 287 Query: 302 PKIVWLRETIKN 313 P WLR+ I+ Sbjct: 288 PAHQWLRDCIQR 299 >UniRef50_B5WAN2 Transcriptional regulator, LysR family n=1 Tax=Burkholderia sp. H160 RepID=B5WAN2_9BURK Length = 310 Score = 244 bits (623), Expect = 4e-63, Method: Composition-based stats. Identities = 67/318 (21%), Positives = 132/318 (41%), Gaps = 21/318 (6%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 + D+NLL+ L L+ RSVT+A++R+++ SA S +L +LR F D L + + Sbjct: 1 MRLGHFDMNLLVALDALLDTRSVTRASERLHIGASATSSALGRLREHFGDDLLMQVGRRM 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQIY 120 TPL S+ Q + E + + P F + A L ++L + +++ Sbjct: 61 ELTPLARSLAQPVREILLSVQSTVVTRLEFDPAQARRNFLIRASDYLTTVLLINVVQRLQ 120 Query: 121 QRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 + P T+ + N D + + RGEVD +S+ + + LF D Sbjct: 121 REAPGITLHIANMSDDVPERLDRGEVDFVIYPS----------ASVNASHPSQALFEDSF 170 Query: 181 CVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVL-QELGRERTIAMSLPEFE 239 + + + T +L+ +L+ H++ + S + + ++V +LG +R+I ++ F Sbjct: 171 SCVVWSGNELIGDTLSLEQYLQLGHVAATFGDSRSVSFESVFINKLGLKRSIEVTTTNFN 230 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 + + R + Y + L L+ + + WH N+ Sbjct: 231 TLPQLVIGT-MRIATVHTRLARIYARYLPLRLL-------PLPMDIPPLVEVMQWHAINN 282 Query: 300 HNPKIVWLRETIKNLYAS 317 +P W+R ++ S Sbjct: 283 SDPAHAWMRSVLQEQAQS 300 >UniRef50_B0KG68 Transcriptional regulator, LysR family n=9 Tax=Pseudomonas RepID=B0KG68_PSEPG Length = 324 Score = 244 bits (623), Expect = 4e-63, Method: Composition-based stats. Identities = 75/322 (23%), Positives = 136/322 (42%), Gaps = 25/322 (7%) Query: 1 MKKS-ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSP 59 M ++ + D+NL++ + LMQER++T+AA+++ V VS +LA+LRA F+DPL V Sbjct: 16 MNRNELRKADINLMVVFEALMQERNLTRAAEKLFVAQPTVSAALARLRAMFNDPLLVRVG 75 Query: 60 LGLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTP--RGLKFELAAESPLMMIMLNALSK 117 + P+ + + L + ++ L H P + F + + +L L + Sbjct: 76 NRMEPSARAEEVIKYLTPALDAMSVALSLTHDFDPLTSKMTFRIGLSDDVESGLLPPLLR 135 Query: 118 QIYQRYPQATIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLF 176 + P + +++ DY D + G+V +G S + LP +VL Sbjct: 136 ALRVEAPNVVVVVQHVDYWRIPDLLAAGDVTVGISQTK----------GLPANAKRKVLR 185 Query: 177 SDVPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLP 236 + +R D LD F PH+ + + +D+ L+E+GRER + +S+P Sbjct: 186 TMQGR-VVRAD--KSATPLTLDEFCARPHVQVSPTANTQGVVDDWLKEIGRERKVVLSVP 242 Query: 237 EFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHK 296 +F + A D LL Q + L LP + ++W Sbjct: 243 QFSSLPAILAGTD-LLACCPDYAAQGMERWGNLQAEQLPFE-------TTALELAMVWLS 294 Query: 297 RNSHNPKIVWLRETIKNLYASM 318 +P WLR +++ + Sbjct: 295 TTDSDPAERWLRSRLEHYMGGV 316 >UniRef50_A6GE91 Probable transcription regulator protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GE91_9DELT Length = 305 Score = 244 bits (623), Expect = 4e-63, Method: Composition-based stats. Identities = 66/317 (20%), Positives = 122/317 (38%), Gaps = 21/317 (6%) Query: 4 SITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLS 63 I LDLNLL L+ L+ RSV++AA+ I V+ A+S +L +LRA D L + + Sbjct: 3 DIDALDLNLLKSLRALLDTRSVSRAAEAIGVSQPAMSAALRRLRAALGDELLLRQGHQMI 62 Query: 64 PTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQIYQ 121 PT S+ + L + + + L + + ++ ++ L + + Sbjct: 63 PTAYAESLVEPLTDALGQLEVALFQRAGFDASSWATTLFILTTDDVIEVLGGPLHDALAE 122 Query: 122 RYPQATIKLRNWDYDSLD-AITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 P T+ R D + RG+ + + + P + L+ D Sbjct: 123 LAPGVTLAFRTLTSDYGKGQLQRGDAHLAITVDWTA----------PPELKRVRLYDDRF 172 Query: 181 CVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQ 240 +R DH + + F R H+ + +D+ L + G R I +P F Sbjct: 173 VSLVRADHRFARRRPSRAAFARAEHLLVAPLGGTWGPVDDALADDGLGRAIRAVVPTFSS 232 Query: 241 SLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 + + + L+ + + +H L L P+ + + L WH R Sbjct: 233 APGYLVRSE-LVCTLPRHFARAVAGVHGLKLFETPVAL-------APLRYDLFWHPRFDR 284 Query: 301 NPKIVWLRETIKNLYAS 317 +P VWLR ++ + + Sbjct: 285 DPGHVWLRGLLREVADA 301 >UniRef50_B8IVY8 Transcriptional regulator, LysR family n=4 Tax=Proteobacteria RepID=B8IVY8_METNO Length = 341 Score = 243 bits (622), Expect = 5e-63, Method: Composition-based stats. Identities = 73/338 (21%), Positives = 130/338 (38%), Gaps = 41/338 (12%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 + LDLNL+ +M+ER V +A + + ++ SAVS L +LR D LFV + G+ P Sbjct: 12 LNRLDLNLIRLFDAVMRERHVARAGQSLGLSQSAVSHGLRRLRTLIGDDLFVRTVQGMEP 71 Query: 65 TPLMVSMEQNLAEWMQMSNLLLDKP-HHQTPRGLKFELAAESPLMMIMLNALSKQIYQRY 123 TP ++M + + + + +F LAA + ++ AL + Sbjct: 72 TPRALAMAVQVRDALTAIEGAIGPQRFDPASSTRQFRLAATDHITAVVAPALMRTFETEA 131 Query: 124 PQATIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCV 182 P A+I +R D + G++DI + S +P + LF D + Sbjct: 132 PLASILIRPATRIDLTMQVDLGQIDIVVG----------IFSQIPHRLHARTLFEDRDVL 181 Query: 183 WLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRER------------- 229 DHP ++ T R P + + ++ D L E G R Sbjct: 182 VTAPDHPEAGGATDIRTLARDPLMVVTVGGTEDGLPDGRLSERGLTRQTEMFDRDALNRA 241 Query: 230 --------TIAMSLPEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDES 281 +++ P F + A D+ +A P + + + V++P Sbjct: 242 FRAAGLVPRLSVLQPHFLAVPSLLA--DSRRVAIVPASLAHGFEAAGVARVSMP------ 293 Query: 282 QQKKLEVPFTLLWHKRNSHNPKIVWLRETIKNLYASMA 319 + + ++WH+R +P WLRE + +A Sbjct: 294 PWEPRTMAVQMVWHERWRQDPAHAWLREALFRASRGIA 331 >UniRef50_Q15XL4 Transcriptional regulator, LysR family n=1 Tax=Pseudoalteromonas atlantica T6c RepID=Q15XL4_PSEA6 Length = 303 Score = 243 bits (622), Expect = 5e-63, Method: Composition-based stats. Identities = 66/314 (21%), Positives = 126/314 (40%), Gaps = 23/314 (7%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 LDLNLL+ L+ L++ER V+ AA+RI+++ AV+ +L +LR +F+D L V S + Sbjct: 1 MRFDGLDLNLLVALEALIEERHVSAAARRIHLSQPAVTGALKRLREYFNDELLVQSGRRM 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTP--RGLKFELAAESPLMMIMLNALSKQIY 120 TP ++ + + + + + P F ++ I+L + + Sbjct: 61 FLTPKAEALAEPVHRALLQIRGEITRAGSFNPLTTTRHFVVSVSDYAYTILLADVVAKAA 120 Query: 121 QRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 P T ++ + + R E+D+ + + L+ D Sbjct: 121 SLAPSVTFEIVPPNEQVNERFERAEIDLLLTVDRFAL----------PGHAFTELWRDEE 170 Query: 181 CVWLRKDHPALHQTWNLDTFLRYPHISICWE-QSDTWALDNVLQELGRERTIAMSLPEFE 239 + + A T + DTF H + + DN + + G +R + + LP+F Sbjct: 171 VIISWQG--ANFDTIDADTFFACGHAVASFGLERRPSIADNHINQAGWKRRVEVQLPDFG 228 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 L RY ++ +L+ + L + PF + + + WHK + Sbjct: 229 ALCQAVVGT-KRLATMHRRYALHFAKLYPIKLHSTWEPFPKIVEG-------MQWHKVRN 280 Query: 300 HNPKIVWLRETIKN 313 +P + WL IK+ Sbjct: 281 LDPGLQWLAGLIKD 294 >UniRef50_UPI0001BCC5DA LysR family transcriptional regulator n=1 Tax=Aeromicrobium marinum DSM 15272 RepID=UPI0001BCC5DA Length = 315 Score = 243 bits (621), Expect = 7e-63, Method: Composition-based stats. Identities = 67/306 (21%), Positives = 117/306 (38%), Gaps = 19/306 (6%) Query: 15 CLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSMEQN 74 LM E SVT+AA+R+++ A+S SLA+LR +FDDPL V L+PT + + Sbjct: 20 AFDALMAESSVTRAAERMSIGQPAMSASLARLRKFFDDPLLVRQGRSLAPTNRALELVAP 79 Query: 75 LAEWMQMSNLLLDKPHHQTP--RGLKFELAAESPLMMIMLNALSKQIYQRYPQATIKLRN 132 + E + + P F + A ++++ L L + + P ++ Sbjct: 80 IREALDGLESTIRAGREFDPTTSSRTFTVMASDYVLLMFLGPLLSDLRREAPHVRFEIFP 139 Query: 133 WDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPALH 192 D+ ++ R ++D+ E L + +LF+D + +DHP + Sbjct: 140 VTRDAAPSVVRSQLDLLIYPDE--------LVEDEPLVRSRMLFTDRLVCAVARDHPDVG 191 Query: 193 QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQPDNLL 252 F P S D LQ++G ER +A+ F + ++ Sbjct: 192 DVMTEHQFRTLP-SVSFSSSSTATISDMRLQQVGYERPLAIEAQSFVVQPLLLPGT-TMM 249 Query: 253 LATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWLRETIK 312 R +Y+ L L+ P+ ++ W R +P WLR + Sbjct: 250 ALLPERLARYFESRISLRLMEPPVELSPLRE-------AAFWSARADADPAHRWLRRRMV 302 Query: 313 NLYASM 318 A M Sbjct: 303 EAAARM 308 >UniRef50_A0R264 Transcriptional regulator, LysR family protein n=1 Tax=Mycobacterium smegmatis str. MC2 155 RepID=A0R264_MYCS2 Length = 301 Score = 243 bits (621), Expect = 7e-63, Method: Composition-based stats. Identities = 58/299 (19%), Positives = 105/299 (35%), Gaps = 22/299 (7%) Query: 22 ERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSMEQNLAEWMQM 81 ERSV AA+R++ + A+S++LA+LR DDP+ V + + PTP ++++ + + +Q Sbjct: 19 ERSVGGAAERLHTSAPAMSRTLARLRRVLDDPVLVRAGREMVPTPRALALQGRVHDVVQQ 78 Query: 82 SNLLLDKPHHQT--PRGLKFELAAESPLMMIMLNALSKQIYQRYPQATIKLRNWDYDSLD 139 + + P F + L L +++ T+K ++ Sbjct: 79 ARAVFTPPEVPDLPNLRRTFSVQLGDGLFSHCGPRLLARVHAEALNVTLKFVGESHEDTH 138 Query: 140 AITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPALHQTWNLDT 199 ++ G VDI + E L + R H + L Sbjct: 139 SLREGSVDIEIG----------QVRRTEPETIIEPLVEENWVGVARAGHELTGKRVTLKR 188 Query: 200 FLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQPDNLLLATAPR- 258 F H+ +D++L E G R + P LF+ D L+ P Sbjct: 189 FADAEHVVFSRRGRLRGPVDDLLAEHGLRRRVVACAPSPAGGLFLIQNSD--LVGMLPAG 246 Query: 259 YCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWLRETIKNLYAS 317 L +PL + + WH R + WLR+ +++ Sbjct: 247 IGAQAIATFALQTFTIPLELP-------PLVIGMAWHPRFDADGAHRWLRDCVRSAVRG 298 >UniRef50_A0JW61 Transcriptional regulator, LysR family n=1 Tax=Arthrobacter sp. FB24 RepID=A0JW61_ARTS2 Length = 295 Score = 243 bits (621), Expect = 7e-63, Method: Composition-based stats. Identities = 65/312 (20%), Positives = 114/312 (36%), Gaps = 23/312 (7%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 + LDLNL+ + + RS+T+ A + +T +VS +L++LR DPLF G++P Sbjct: 1 MADLDLNLVKTFVSIYETRSLTQTAAEMCITQPSVSHALSRLRRQLGDPLFTRGAGGMTP 60 Query: 65 TPLMVSMEQNLAEWMQMSNLLLDKPHHQTP--RGLKFELAAESPLMMIMLNALSKQIYQR 122 T + V + + +L +D P F L M L AL K++ Sbjct: 61 TRVAVELFSTFKASLNAIDLAIDGTRDFDPTTSSRTFRLCLSDLGEMAFLPALMKRLLDS 120 Query: 123 YPQATIKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPC 181 PQ +++ D + + + G VD + I V+ + Sbjct: 121 APQIVLEVVPMQIDKVSEWLAHGAVDAAIASVPIGGA-----------IRSRVIDQEHYV 169 Query: 182 VWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQS 241 L L + L F H+ I + + + LG ER IA+ L F Sbjct: 170 CVLPDGAGGLAEKMTLSQFTGMRHVVIDPS-AGHHLAEAEIAALGIERNIALRLHHFSVL 228 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 + A + + R + + + L + LP +L W+ + Sbjct: 229 PLVLAGQNLAAIV-PSRVARMFTEQAPLTIRELPFNVP-------SFDVSLYWNGTAPRS 280 Query: 302 PKIVWLRETIKN 313 + W ET+ + Sbjct: 281 RALRWFHETVAD 292 >UniRef50_A6SVA6 Transcriptional regulator, LysR family n=1 Tax=Janthinobacterium sp. Marseille RepID=A6SVA6_JANMA Length = 311 Score = 242 bits (620), Expect = 8e-63, Method: Composition-based stats. Identities = 66/328 (20%), Positives = 129/328 (39%), Gaps = 27/328 (8%) Query: 1 MKKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPL 60 M + LD++L+ L LL+ E++V++ A ++N ++S SL KLR DPL V Sbjct: 1 MSRLPDHLDIHLIRILYLLLCEKNVSRVALKLNRPQPSISASLRKLRELTGDPLLVRGAR 60 Query: 61 GLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQ 118 G+ PT S+ ++ + + L P+ F +AA + + + Sbjct: 61 GMVPTQHGESLMKSAKRILDEAEHLFIPKTAFVPQDEARTFHIAAPDYMNTQFFTEVIAR 120 Query: 119 IYQRYPQATIKLRNWDYDS--LDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLF 176 + + P++ I + D+ + ++ GE+D+ + + +P + LF Sbjct: 121 LRRESPKSHIVIHALGPDTDYVRLLSDGELDLVIANWD----------EMPEHLHMSKLF 170 Query: 177 SDVPCVWLRKDH----PALHQTWNLDTFLRYPHISICWE-QSDTWALDNVLQELGRERTI 231 D +R D ++ +L PH + +D L++ R I Sbjct: 171 DDPIVCLMRSDCAYAKRTAKDAMTIEDYLSLPHAAPSQILPGYHGTIDTFLEKQNLRRNI 230 Query: 232 AMSLPEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFT 291 + F +M + D +L A ++ +Y + L +P+ F + F Sbjct: 231 VVESAHFRMLPYMVEKTDLVLTA-GQQFTSFYEKTLSLKSYTVPIKFP-------PLRFY 282 Query: 292 LLWHKRNSHNPKIVWLRETIKNLYASMA 319 LWH+R + WLR + ++ Sbjct: 283 QLWHERVHQATEHKWLRAQVCAAAKVLS 310 >UniRef50_Q2SG65 Transcriptional regulator n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SG65_HAHCH Length = 314 Score = 242 bits (620), Expect = 9e-63, Method: Composition-based stats. Identities = 64/301 (21%), Positives = 126/301 (41%), Gaps = 22/301 (7%) Query: 21 QERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSMEQNLAEWMQ 80 +ERSVT+AA+++++ AVS +L++LR FDDP+ V + G++PT + +E L + Sbjct: 24 RERSVTRAAEKMHLGQPAVSGALSRLRELFDDPILVRTAQGMTPTVKALQLEAELLPALG 83 Query: 81 MSNLLLDKPHHQTPRGLK--FELAAESPLMMIMLNALSKQIYQRYPQATIKLRNWDY-DS 137 + L +P P + F + + + + L ++++ P + +++ D Sbjct: 84 KIHSALFEPSTFDPATSEGVFTVGMADWVEVWLGPRLIAKLHEMAPSIRLAIKSVDPFQG 143 Query: 138 LDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPALHQTWNL 197 + + +D+G S + P + + L S ++ + L Sbjct: 144 PAMLEQNGMDLGVSCF---------IDGGPSWMLRKRLCSMGFLCVYDPSLVSITEPLTL 194 Query: 198 DTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQPDNLLLATAP 257 + ++ +PH+ + ++ + +D L E G RT+ +LP F + + +LAT P Sbjct: 195 EQYVSHPHLMVTYKGAFESNVDIALAEKGMRRTVQFALPRFSTLPPILKR--IPVLATVP 252 Query: 258 R-YCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWLRETIKNLYA 316 + L A PLP E L+W +P + WL I+ Sbjct: 253 KVVASCMCAASGLRAAAPPLPL-------KETSVDLVWRATRDKDPALRWLMAVIEACLQ 305 Query: 317 S 317 Sbjct: 306 E 306 >UniRef50_Q7MEK1 Transcriptional regulator n=15 Tax=Vibrionaceae RepID=Q7MEK1_VIBVY Length = 307 Score = 242 bits (620), Expect = 1e-62, Method: Composition-based stats. Identities = 64/320 (20%), Positives = 120/320 (37%), Gaps = 21/320 (6%) Query: 2 KKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLG 61 + ++ DLNL+ + +E++++KAA R++++ AVSK+LA+LR +D+PLF SP G Sbjct: 4 RFAMKNTDLNLIPIFVAIFEEQNLSKAAARLDISQPAVSKALARLRDIYDEPLFHRSPSG 63 Query: 62 LSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTP--RGLKFELAAESPLMMIMLNALSKQI 119 + PT V + + + L F +A S ++ L KQI Sbjct: 64 VEPTSFAVDIYPAMLTAFKNFTSTLSASSEFEAKVSNRIFSIACVSVASYELMPQLLKQI 123 Query: 120 YQRYPQATIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSD 178 Q P ++++ D + D+ + ++ E +FS+ Sbjct: 124 RQHAPNISLEVHPLFTEDYESDLRLQRYDLIIDMAPRGWTTLKV----------EPIFSE 173 Query: 179 VPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEF 238 V DHP + ++ FL H+ + + + +R IA Sbjct: 174 RLMVVCCADHPRIADACSVAQFLAEEHVVVSRWHARKSLMSAEDIADLAKRKIAYRASGA 233 Query: 239 EQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRN 298 + L + + + + + + + V+LP D +WH Sbjct: 234 LEMLPVIHGSEYIGM-LPESTINAFAGTYNIKAVSLPFDHDV-------YDLCAIWHPSR 285 Query: 299 SHNPKIVWLRETIKNLYASM 318 S WLR +K + Sbjct: 286 SSESAHQWLRNQLKAAVKVL 305 >UniRef50_B6R352 Transcriptional regulator, LysR family n=1 Tax=Pseudovibrio sp. JE062 RepID=B6R352_9RHOB Length = 303 Score = 242 bits (619), Expect = 1e-62, Method: Composition-based stats. Identities = 72/319 (22%), Positives = 128/319 (40%), Gaps = 25/319 (7%) Query: 2 KKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLG 61 K + +LD L+ L+L+ + SVT+AA+ + V S VS L ++R DPLFV + Sbjct: 3 KMNYLSLDGRALMMLKLIHETGSVTQAAQMMGVNQSTVSHGLERVRGLLGDPLFVKAGRN 62 Query: 62 LSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGLK--FELAAESPLMMIMLNALSKQI 119 + PT M ++ + E +Q L+ +P P F + +++ ++ +++ Sbjct: 63 VVPTERMDALMPMVEELLQTL-ALIGEPSSFDPSTATNRFVIDCRDEDHNLLIPSVIRRL 121 Query: 120 YQRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 + P T++ R + ++ GE D+ F+ + LF D Sbjct: 122 RKEAPNVTLRCRLSHRHEVASLVDGEADLLFTPLPPPDSH---------EFVAQTLFDDE 172 Query: 180 PCVWLRKDHPALHQTW-NLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEF 238 V+ P L+ ++ PH ++ + +D L ELG +R S P F Sbjct: 173 FVVFYD---PITRDAPDTLEKYVAAPHANMLVTADEVTFIDRALAELGHKRQTVYSAPSF 229 Query: 239 EQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRN 298 D L+AT PR L P+P ++V +WH RN Sbjct: 230 NALAATLPGTD--LIATMPRKLICGGIKSGLASCNCPVPV-------VDVGINAIWHIRN 280 Query: 299 SHNPKIVWLRETIKNLYAS 317 +P W R+ + + + Sbjct: 281 RTSPAHKWFRDLVVSEAQA 299 >UniRef50_B5XRQ2 Transcriptional regulator, LysR family n=4 Tax=Klebsiella RepID=B5XRQ2_KLEP3 Length = 307 Score = 242 bits (619), Expect = 1e-62, Method: Composition-based stats. Identities = 62/319 (19%), Positives = 118/319 (36%), Gaps = 21/319 (6%) Query: 2 KKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLG 61 + + +DLNLL L +L +E SVT+ A+ +++ A+S +L +LR FDDPLFV S G Sbjct: 6 ENDFSRIDLNLLTVLMVLYREASVTRTAEVLHLGQPAISGALKRLREMFDDPLFVRSARG 65 Query: 62 LSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGLK--FELAAESPLMMIMLNALSKQI 119 + PTP ++ +L M+ + + P + F + ++ L + Sbjct: 66 MLPTPRAQALMTDLQPLMENLHSAMFGAGEFVPARAQQLFRIGLSDWSEHWLMPQLLPGL 125 Query: 120 YQRYPQATIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSD 178 Q P +++ D + +D+ S + + E + + Sbjct: 126 MQEAPGVSLQSIAADPFQVRQLLEEERIDVAVSVNKQSRG----------EVVSEPVMTM 175 Query: 179 VPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEF 238 ++ F+ + H+ + + ++ +D L G R + + F Sbjct: 176 GVTTLWSPQQIPCRGPLSVSDFVAWEHVMVAYRETGHGEIDRQLASQGLARRVRFATQNF 235 Query: 239 EQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRN 298 + L Q + H L A P+ + E +L HKR Sbjct: 236 STFPLL-LTTLPLFATVPQGLAQRWQAQHALRADAPPVTYP-------EFTLCILRHKRR 287 Query: 299 SHNPKIVWLRETIKNLYAS 317 + +P + WL +K Sbjct: 288 AQDPALNWLVTKLKQAMRG 306 >UniRef50_Q9RBI3 SalR n=2 Tax=Acinetobacter RepID=Q9RBI3_ACIAD Length = 296 Score = 242 bits (619), Expect = 1e-62, Method: Composition-based stats. Identities = 62/314 (19%), Positives = 135/314 (42%), Gaps = 21/314 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +DL+L+ + + ++++KAA+ +N++ +V+ +L +LR ++PLF + G+ T L Sbjct: 1 MDLSLIRIFICVYENKNISKAAEILNLSQPSVTYNLNRLRKHLNNPLFERTQYGVEATKL 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRGL--KFELAAESPLMMIMLNALSKQIYQRYPQ 125 + E + + +D+ + P F + + +L L + + P+ Sbjct: 61 SHELYPVFKESILKIEIAVDEALNFNPLTSNKTFRIGLSDIGEICLLPTLIEYLRAHAPK 120 Query: 126 ATIKLRNWDYDSLDA-ITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 I++ D ++ + G +D+ ++YE LF + + Sbjct: 121 IKIEVEEIKIDQVEKWLIEGFIDVAVFNSTHLEF---------KHLEYETLFLERYVALV 171 Query: 185 RKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 +HP + T + D +L H++I + +D+VL+ +G +R IA+ +P F + Sbjct: 172 NMNHPRIRSTLSFDAYLNESHVAIKSS-TGHTQVDHVLKLMGHQRKIALEVPHFGVLQGV 230 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 + D L++ R Q Y + ++ LP + E L W + + Sbjct: 231 LDKTD-LMVTLPSRAAQQYLNQSHVRVLELPF-------QMSEFYVGLHWFAQTNEPLAR 282 Query: 305 VWLRETIKNLYASM 318 +WL +T K + + + Sbjct: 283 IWLIQTCKKVISVL 296 >UniRef50_C4V039 Transcriptional regulator, LysR family n=4 Tax=Enterobacteriaceae RepID=C4V039_YERRO Length = 337 Score = 242 bits (619), Expect = 1e-62, Method: Composition-based stats. Identities = 67/296 (22%), Positives = 124/296 (41%), Gaps = 23/296 (7%) Query: 21 QERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSMEQNLAEWMQ 80 +E SVT+AA+R+++ AVS +LA+LR F+DPLFV S G++PTP ++ +L M+ Sbjct: 29 REGSVTRAAERLHLGQPAVSGALARLRIMFNDPLFVRSAKGMAPTPRAETLIASLLPMME 88 Query: 81 MSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQIYQRYPQATIKLRNWDYDSL 138 +L +P P F L + ++ L + + P +++ D Sbjct: 89 QMKQVLFQPPTFNPATDAHTFRLGMSDWVERWLMPGLLATLAREAPGIQLQMMASDPFLD 148 Query: 139 DAITR-GEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPALHQTWNL 197 + + + +VD+ S + +P + E + C AL +L Sbjct: 149 EELVQLDKVDVAISVGQ----------GIPAGMIREPVVRMGFCTLWHPLQLALTSPLSL 198 Query: 198 DTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQPDNLLLATAP 257 + ++ + H+ + + + +D L R + P F M Q L T P Sbjct: 199 EEYIAHDHLLVSYRGASHSQIDEQLARKNLTRRVRYVTPHFSSLPLMLKQ--IPALTTVP 256 Query: 258 R-YCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWLRETIK 312 + + + L A+P+ +L+W R SH+P ++WL E ++ Sbjct: 257 AGLASGWVEHYGLSRSAVPVSAPA-------FTLSLMWSTRRSHDPALLWLLEKLR 305 >UniRef50_Q15Y73 Transcriptional regulator, LysR family n=1 Tax=Pseudoalteromonas atlantica T6c RepID=Q15Y73_PSEA6 Length = 302 Score = 242 bits (618), Expect = 1e-62, Method: Composition-based stats. Identities = 69/304 (22%), Positives = 120/304 (39%), Gaps = 23/304 (7%) Query: 15 CLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSMEQN 74 + L E+++T+ A +++TPSAVS S+ +LR DPLF S + PTP M Sbjct: 17 VFESLYVEQNMTRTADALHITPSAVSHSIKRLRECLGDPLFQRSNNRMLPTPACQRMAPL 76 Query: 75 LAEWMQMSNLLLDKPHHQTP--RGLKFELAAESPLMMIMLNALSKQIYQRYPQATIKLRN 132 + + + ++ P F + L +L AL++++ P+ T Sbjct: 77 IIDNLTRLRQIMQHWGEFQPLTSEHHFRIGMHYALEPSILPALTERLALLAPKVTFSSVR 136 Query: 133 WDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPAL 191 D +L + G +D+ ++ L D CV +RKDHP Sbjct: 137 VDRITLTRDLGAGHIDLALDVALPIKSPVL----------HQKLIDDEFCVLVRKDHPL- 185 Query: 192 HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQPDNL 251 D + HI + S D + Q+ G R + + + + M A ++L Sbjct: 186 RDRLTKDAYFNAEHIGVSNRSSGASVEDLLFQQQGLSRKVVIRCQNYFSAKGMVACSNHL 245 Query: 252 LLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWLRETI 311 L T PR + + + LV+LP+ ++ L WHK + + WLR Sbjct: 246 L--TVPRRIAEHLKQDDVQLVSLPV-------NIADISTHLYWHKNTEQDSALSWLRALF 296 Query: 312 KNLY 315 ++ Sbjct: 297 DGIF 300 >UniRef50_C5A8T0 Transcriptional regulator, LysR family protein n=2 Tax=Proteobacteria RepID=C5A8T0_BURGB Length = 313 Score = 241 bits (617), Expect = 2e-62, Method: Composition-based stats. Identities = 75/323 (23%), Positives = 120/323 (37%), Gaps = 26/323 (8%) Query: 2 KKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLG 61 +I +DLNLL ++L E ++AA R+++T SAVS +L +LRA + DPLFV + G Sbjct: 3 AMNIADVDLNLLKVFEVLFDEGGASRAAIRLDLTQSAVSAALRRLRALYGDPLFVRTGRG 62 Query: 62 LSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG---LKFELAAESPLMMIMLNALSKQ 118 L+PT ++ + E + L P +A + L + Sbjct: 63 LAPTARARELKPLIGEALDRCRQSL-AFGAPAPASFEGRAVSVAMSDDFEIAFGGRLIEC 121 Query: 119 IYQRYPQATIKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFS 177 + P + R + DA+ EVD+ + R + + L Sbjct: 122 AARLAPGLRVIFRQTHSQIVGDALANREVDLAIAAGGFATR----------GLGHMALGH 171 Query: 178 DVPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPE 237 + LD FL H+ + +D L E+GR RT+ S Sbjct: 172 GRYACLVDPAAAPGRLVLTLDDFLAREHVLVSSGG-VVGIVDEALAEIGRRRTVRASTTH 230 Query: 238 FEQSLFMAAQPDNLLLATAPRYCQ-YYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHK 296 F F+ +AT P + ++ L LVA PL P L W Sbjct: 231 FAALPFLLRGT--PAVATIPHHAAEALARMTGLGLVACPLAMPA-------YPVALGWRV 281 Query: 297 RNSHNPKIVWLRETIKNLYASMA 319 + + LR+ I + +A A Sbjct: 282 STLRDAAVAKLRQAIVDSFAGFA 304 >UniRef50_B7RWY7 LysR substrate binding domain protein n=2 Tax=unclassified Gammaproteobacteria (miscellaneous) RepID=B7RWY7_9GAMM Length = 327 Score = 241 bits (616), Expect = 3e-62, Method: Composition-based stats. Identities = 75/320 (23%), Positives = 143/320 (44%), Gaps = 20/320 (6%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 K + +DLNLL+ LQ+L++ER+V++AA+R+ +T A+SK+L++LRA FDD LF S G+ Sbjct: 4 KELAKIDLNLLISLQVLLEERNVSRAAERLFITQPAMSKTLSRLRAVFDDALFTRSSHGM 63 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLD-KPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQ 121 PTP + + L E + L+ + + + LA + + +L L+K++ Sbjct: 64 QPTPRALELTDRLTEILSGIGQLVSKQAFNPALIDTEITLALSEYIGVALLPTLAKRLQM 123 Query: 122 RYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPC 181 + P +++ + L+ + G++D R H L S P Sbjct: 124 QAPNLHLRIVTRVENQLEQLALGKLDFAVHIRHQH---------YSPDFRTIDLGSSPPV 174 Query: 182 VWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWAL---DNVLQELGRERTIAMSLPEF 238 + +R++HP +L YP + + + + +++ LG ++ + Sbjct: 175 LLIRENHPLQAGNISLADLANYPVVRLYVSDREQLQVKAGEDLFDGLGTNTRGSLEISHL 234 Query: 239 EQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRN 298 ++ + D +L P + N+ + ALP+P + V + L H+R Sbjct: 235 MTAMEVLRNTDYYMLG--PAFLTQ-NESISHGITALPVP----RTGNSSVNYVLAAHQRT 287 Query: 299 SHNPKIVWLRETIKNLYASM 318 ++P WL E I + Sbjct: 288 ENSPLHNWLWEEITCTIREL 307 >UniRef50_C9NTB9 LysR-like transcriptional regulator n=5 Tax=Vibrionales RepID=C9NTB9_9VIBR Length = 314 Score = 241 bits (616), Expect = 3e-62, Method: Composition-based stats. Identities = 69/321 (21%), Positives = 126/321 (39%), Gaps = 23/321 (7%) Query: 1 MKKSI--TTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNS 58 M +I +DLNLLL L + RSV+ AAK +++ A S +L +LR DDPLF Sbjct: 1 MSDNINWRRVDLNLLLTFDALYKHRSVSAAAKHLHLGQPATSYNLKRLRELLDDPLFERG 60 Query: 59 PLGLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPR--GLKFELAAESPLMMIMLNALS 116 ++PT + +E + + + + + + F++ + L Sbjct: 61 GSSMTPTTRAMEIEPKVRQILSIFSQDIMPKAAFEADSFDGTFKIGLSDYAEQVYGPELF 120 Query: 117 KQIYQRYPQATIKLRNWD-YDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVL 175 ++ Q P A + + D + ++A+ + EVD+ + S LP + L Sbjct: 121 DKLQQLAPNAKVLFKPVDVSNCVEALEKQEVDLCIG----------VFSDLPPKVTSTFL 170 Query: 176 FSDVPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSL 235 + + +L+T+L P + I Q T +D L +G +R + + Sbjct: 171 YREKHLCIFDNRVLGSELPLSLETYLATPQMIITASQELTTKVDATLSSMGVKRNVVLGS 230 Query: 236 PEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWH 295 F M LL A + L L P+ + ++ Sbjct: 231 TRFLTIRRMLTGR-RLLAVMAEMVGRVELIDDNLTLCPPPINIP-------DFDIEMVTL 282 Query: 296 KRNSHNPKIVWLRETIKNLYA 316 R+SH+P+I+WL + +K + Sbjct: 283 TRDSHHPRILWLSDWVKEVIQ 303 >UniRef50_D0LQN8 Transcriptional regulator, LysR family n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LQN8_HALO1 Length = 302 Score = 241 bits (616), Expect = 3e-62, Method: Composition-based stats. Identities = 67/316 (21%), Positives = 135/316 (42%), Gaps = 20/316 (6%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 +++ +D+NLL+ L L+ RSVT+AA ++PSA+S+ L +LR F+D L V L Sbjct: 5 RNLHAVDMNLLVALDALLTTRSVTRAAGLAGLSPSAMSRVLGRLRDLFEDELLVRVGHEL 64 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQIYQ 121 PT ++ L ++ + LL P + + L ++L +L + + Sbjct: 65 LPTARAQQVQPRLRVLLRDTEQLLSPPATSASEFEGRLTVLLTEHLAKLVLPSLLVCVRE 124 Query: 122 RYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPC 181 P+ + +R+ A+ +G+ + ++ LF++ Sbjct: 125 EAPRLALDVRHPGPYPESALQQGDAVLWVDVTYEP----------DPSLQAVALFAEPYL 174 Query: 182 VWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQS 241 +R +HP + LD ++ YPH+S+ +D +L+ GR R +A+++ F Sbjct: 175 SVVRCEHPLVGTPVGLDDWVAYPHVSVSVRGWGRSDVDIMLERAGRTRHVALTVHAFALV 234 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 + D ++T P + ++ P+ + WH+R+ + Sbjct: 235 ADVVVCGDY--VSTMPARLAQRLVDERHTVLTPPIELP-------PLSIYACWHRRSDTD 285 Query: 302 PKIVWLRETIKNLYAS 317 P+ W+R+ + L+A Sbjct: 286 PRAAWIRQKVLELFAG 301 >UniRef50_Q477L7 Regulatory protein, LysR:LysR, substrate-binding n=6 Tax=Burkholderiales RepID=Q477L7_RALEJ Length = 315 Score = 241 bits (615), Expect = 3e-62, Method: Composition-based stats. Identities = 68/324 (20%), Positives = 119/324 (36%), Gaps = 24/324 (7%) Query: 1 MKKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPL 60 M ++ D LL L +L+ E+SV++ A R+N + A+S +L +LRA F+DPL Sbjct: 1 MIRADDPFDTYLLRVLCILIAEQSVSRTAIRLNQSQPAISSALKRLRAIFNDPLLTREKN 60 Query: 61 GLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGLK--FELAAESPLMMIMLNALSKQ 118 + PT + + +N + + LL P + F +A L + ++ Sbjct: 61 VMVPTERALQLARNAQAALSALDNLLVSDDRFDPATTEQSFTVAMPDYLAPPFFAHVVRE 120 Query: 119 IYQRYPQATIKLRNWDY--DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLF 176 + P A + D A++ G DI + P + VL Sbjct: 121 FRRAAPHARLSAVPLSATFDYEQALSEGAADIVIGNWPNP----------PEHLHLSVLL 170 Query: 177 SDVPCVWLRKDHPALH-QTWNLDTFLRYPHISICW-EQSDTWALDNVLQELGRERTIAMS 234 D + D + +L HI + +D+ L + R +S Sbjct: 171 EDEVVCVVAPDSVHNQPGKFTPQAYLGAAHIVPTPYSRDQRGLVDSGLSTMRVHRDNRVS 230 Query: 235 LPEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLW 294 P F + + D L+L T + Y+ Q L ++ P+ F + F LW Sbjct: 231 CPYFNLAPSLIPGTD-LILTTGRHFANYHAQHVPLAVLRPPIEFPFMR-------FYQLW 282 Query: 295 HKRNSHNPKIVWLRETIKNLYASM 318 H + +WLR + + Sbjct: 283 HPSRHRSAAHMWLRGMLTAASQEL 306 >UniRef50_B4S2V4 Transcriptional regulator, LysR family protein n=2 Tax=Alteromonas macleodii RepID=B4S2V4_ALTMD Length = 311 Score = 241 bits (615), Expect = 3e-62, Method: Composition-based stats. Identities = 71/321 (22%), Positives = 126/321 (39%), Gaps = 23/321 (7%) Query: 2 KKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLG 61 + LDLNLL + L Q R++T+ A+ +++TPSAVS ++ + R DPLFV Sbjct: 8 HRQFEKLDLNLLKVFEALWQHRNMTRVAEALHITPSAVSHAMRRFRDILGDPLFVKEKQS 67 Query: 62 LSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTP--RGLKFELAAESPLMMIMLNALSKQI 119 + PT + + + + L + P +F +A + L + +L AL + Sbjct: 68 MLPTAACERLAPAILKALNDIRKALGEFVDFDPLHSHQRFVIAMQESLELGVLPALLSTL 127 Query: 120 YQRYPQATIKLRNWDYDS-LDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSD 178 ++ P I D+ L +T + + ++ I + +L D Sbjct: 128 EKQAPNIEIVSTRLHRDTILADLTNRNLHLVIDIG----------RAVAAPISHSLLRRD 177 Query: 179 VPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEF 238 V + K +P Q+ + ++ HI++ + LQ+LG R + Sbjct: 178 TYKVLMNKQNPLA-QSLDKKRYVAARHITVSNRAKGASVEEIALQQLGVSRPSLWRCQNY 236 Query: 239 EQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRN 298 + + A D LL T P L LP E+ L WH + Sbjct: 237 RAAADVVANTDALL--TLPGSVADAVNDDNLISTKLPYQLP-------ELETHLYWHSQQ 287 Query: 299 SHNPKIVWLRETIKNLYASMA 319 P ++WLR+ + +L+A Sbjct: 288 EGEPGLMWLRDLMLHLFAESG 308 >UniRef50_B3YF82 Transcriptional regulator, LysR family n=2 Tax=Salmonella enterica subsp. enterica serovar Kentucky RepID=B3YF82_SALET Length = 306 Score = 241 bits (615), Expect = 3e-62, Method: Composition-based stats. Identities = 63/298 (21%), Positives = 122/298 (40%), Gaps = 22/298 (7%) Query: 18 LLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSMEQNLAE 77 +L+ ER+VT+ +R++++ SA S +L++LR +FDD L V + TP + + + + Sbjct: 16 VLLAERNVTRTGERVHLSQSATSGALSRLREFFDDQLLVQVGQRMELTPFAEMLVEEVHD 75 Query: 78 WMQMSNLLLDKPHHQTP--RGLKFELAAESPLMMIMLNALSKQIYQRYPQATIKLRN-WD 134 + ++DK P F L +++N I ++ P + + + D Sbjct: 76 IISKCEAIVDKNQKFDPETSTRTFRLNISDASATVVMNNAITLIQKQAPHVRLDISSIID 135 Query: 135 YDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPALHQT 194 + + G +D+ + + + E LF D + +P Sbjct: 136 GPISEYLNIGVIDLIVTPT----------NLVSSQHPAEYLFDDQYVCVVWSGNPLCQSG 185 Query: 195 WNLDTFLRYPHISICWEQSDTWALDNVLQEL-GRERTIAMSLPEFEQSLFMAAQPDNLLL 253 NLD +L HI + + WALD V G +R I + +P F + + L+ Sbjct: 186 INLDNYLSSGHIVARFSKMIGWALDEVFISQSGYQRRIDIIVPSFSMLMTQLIGTN-LIA 244 Query: 254 ATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWLRETI 311 R+ +YY++ + + P+ L WH+ + + I WLR+ + Sbjct: 245 TVHERFARYYSKYLPVEIFPCPI-------ISEPFDMKLQWHRHHDGDLGIQWLRQIL 295 >UniRef50_A9BUT0 Transcriptional regulator, LysR family n=5 Tax=Comamonadaceae RepID=A9BUT0_DELAS Length = 309 Score = 241 bits (615), Expect = 3e-62, Method: Composition-based stats. Identities = 69/323 (21%), Positives = 119/323 (36%), Gaps = 31/323 (9%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 I LDLNLL + + SV++AA+ + ++ A S+++ +LR +PLF + G+ Sbjct: 1 MDIKNLDLNLLRVFDAVYRHCSVSRAAEELGMSQPAASQAVTRLRLLLGNPLFERAHAGV 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTP--RGLKFELAAESPLMMIMLNALSKQIY 120 PTP + + + +++ + + + P +F + L L + ++ Sbjct: 61 RPTPRAERLALAVRQALEVLEVAMSEAQSFEPLQARQRFRIHLSDIGEARFLPPLMQALH 120 Query: 121 QRYPQATIKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 QR P ++ D + DA+ RG +DI R+ VL SD Sbjct: 121 QRAPHVQLETLPMPLDGIADALDRGTLDIAIGFLPGGTRT-----------RQTVLLSDH 169 Query: 180 PCVWLRKDHPAL-----HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMS 234 V LR HPAL L T + ++ +LQ L + I +S Sbjct: 170 YGVLLRSGHPALAHLPEGAPLALATLRQLDFAAVRSHSETL----RILQALRLDERIRLS 225 Query: 235 LPEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLW 294 F + + D L + + + + LP +L W Sbjct: 226 AAHFMAVPSIVGKTD-LAVIMPAEIAAGFVERGGYAVRDADLP-------DHHFDVSLHW 277 Query: 295 HKRNSHNPKIVWLRETIKNLYAS 317 R P WLRE + L+ Sbjct: 278 SWRFEQEPAKRWLRELVCELFQQ 300 >UniRef50_Q122D0 Transcriptional regulator, LysR family n=1 Tax=Polaromonas sp. JS666 RepID=Q122D0_POLSJ Length = 310 Score = 240 bits (613), Expect = 5e-62, Method: Composition-based stats. Identities = 63/322 (19%), Positives = 117/322 (36%), Gaps = 26/322 (8%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 + LDLNLL L + + SVT A K ++++ A S +LA+LR +F D LFV +P GL Sbjct: 1 MNFRQLDLNLLRVLAAIHRTGSVTHAGKALSLSQPATSNALARLRDFFGDELFVRAPSGL 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQ--TPRGLKFELAAESPLMMIMLNALSKQIY 120 PT L + + + ++ + + L+ M+ L AL+ + Sbjct: 61 KPTRLCEQLAPAVLAQLLALETVVTGHEEFEAAHSDMHWRLSLSDLGEMLFLPALAGALR 120 Query: 121 QRYPQATI-KLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 + P A + + D A+ E+D+ + R I E+LF + Sbjct: 121 SQAPGARLSNISVAANDVAAALEAREIDLAIGILQPRQR----------GIRTELLFREN 170 Query: 180 PCVWL----RKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSL 235 R +T + + +++ +L + + I + Sbjct: 171 YVAVASPQWRPASGRSGRTLTTQQLAEAAFVVASPTATFHGSVEQMLVRMKLQDRIVLRA 230 Query: 236 PEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWH 295 F +A D L + Y + Q + + +P L+WH Sbjct: 231 RHFGALPDLALATDLLSIV-PEMYARNLRQRYDFRVWGIP--------GAPSYEVRLVWH 281 Query: 296 KRNSHNPKIVWLRETIKNLYAS 317 ++P W+R ++ L+ Sbjct: 282 SSTDNDPAHQWMRALVQQLFRR 303 >UniRef50_A3VA58 Transcriptional regulatory protein n=2 Tax=cellular organisms RepID=A3VA58_9RHOB Length = 310 Score = 240 bits (613), Expect = 5e-62, Method: Composition-based stats. Identities = 59/318 (18%), Positives = 113/318 (35%), Gaps = 20/318 (6%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 LDLNLL+ L +++ RSVT+AA R+ ++ SA+S +L +LR +FDDPL V + Sbjct: 1 MRFKKLDLNLLVALDHMLEHRSVTEAAGRMFMSQSAMSNALTRLRTYFDDPLLVQVGRRM 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLD--KPHHQTPRGLKFELAAESPLMMIMLNALSKQIY 120 TP ++ + + + +D F L + +++ + + Sbjct: 61 ELTPRAEALRPAIRDVLVRVEAAIDRGPQFEPDQSDRTFNLLLSDYSLRVLMPTMFRLAD 120 Query: 121 QRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 + LR + + I RGEVD+ + + +L+ D Sbjct: 121 DQNATVRFNLRAQEIAPYNQIERGEVDLLIAPEPF----------VSPDHPSTLLYEDRY 170 Query: 181 CVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQ 240 V + + H+ + Q ++ G R + + F Sbjct: 171 VVVAWAKGKYGTGPMDSRAYEAAGHVVMVPPQQAQTVDGRLIAGGGLTRRVEATTFSFAS 230 Query: 241 SLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 ++ + + R L +LP+ +Q + WH Sbjct: 231 LPYLITGTNRIA-TVHGRLAALMMNEADLVSYSLPVEAPPLRQM-------IQWHMLRDG 282 Query: 301 NPKIVWLRETIKNLYASM 318 +P + WLR+ A++ Sbjct: 283 DPGLSWLRDLALASAATL 300 >UniRef50_B2I0F3 Transcriptional regulator n=11 Tax=Acinetobacter RepID=B2I0F3_ACIBC Length = 276 Score = 239 bits (612), Expect = 7e-62, Method: Composition-based stats. Identities = 64/294 (21%), Positives = 109/294 (37%), Gaps = 24/294 (8%) Query: 28 AAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSMEQNLAEWMQMSNLL-- 85 AA I +T +VS L K+R F+DPLF+ + PT L + ++E + + Sbjct: 2 AADAIGLTQPSVSNGLNKIRQHFNDPLFIRVGNEMIPTELAKQIFPLISEVIDKVESINN 61 Query: 86 LDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQATIKLRNWDYDSLDAITRGE 145 + F +A +++L L+ + ++ P + +R ++ + GE Sbjct: 62 FNVNFDPLTSDQLFTIAMTDVSHLVLLPQLTNYLKEKAPLIRLNIRPITPETSYQMANGE 121 Query: 146 VDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPALHQ-TWNLDTFLRYP 204 +D+ L L + F V K HP L + L+ ++R Sbjct: 122 IDLAIGF----------LPQLEEGFYQQKFFRQHYVVISSKSHPRLDPNNFTLEDYMRES 171 Query: 205 HISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQPDNLLLATAPRYCQY-Y 263 HI I + + N LQ G +R I + LP + + + D +AT P Y Sbjct: 172 HIDIDA-GIGHYHIKNELQNKGLDRNILIRLPSYLGVGLVVQETD--AIATVPYYLSQVL 228 Query: 264 NQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWLRETIKNLYAS 317 L ++ PL F WH H W R+T L+ + Sbjct: 229 LVRENLQILPAPLDFPT-------YDVKQHWHMSCHHKSSHKWFRQTCYELFKT 275 >UniRef50_B3QAJ4 Transcriptional regulator, LysR family n=4 Tax=Alphaproteobacteria RepID=B3QAJ4_RHOPT Length = 316 Score = 239 bits (612), Expect = 7e-62, Method: Composition-based stats. Identities = 69/313 (22%), Positives = 132/313 (42%), Gaps = 18/313 (5%) Query: 4 SITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLS 63 ++ LDLNLL L+ L++ R+VT AA+ + ++ A+S++L++LR+ DPL V GL Sbjct: 5 NLAGLDLNLLPPLEALLRRRNVTHAAQDVGLSQPAMSRALSRLRSLLADPLLVRGHHGLV 64 Query: 64 PTPLMVSMEQNLAEWMQMSNLLLDK-PHHQTPRGLKFELAAESPLMMIMLNALSKQIYQR 122 TP ++ L+ + L + +AA +++ L ++ + Sbjct: 65 LTPKAQALVPLLSVAVADLKDLFRERRFDPATEQRTIRIAASDNQTVLLAPPLMARLARE 124 Query: 123 YPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCV 182 P ++ + D + + G +D F+ + LP + D + Sbjct: 125 APGIDLRFELYRADLRERMESGALDFAFA---------LATTDLPPGAVSMPIADDRLAL 175 Query: 183 WLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 +R+ HP +TW + + H+ I LD +L R +A+ P F +L Sbjct: 176 VMRRGHPKAKRTWRISDYADVDHVGIALLDDGRSELDGILAAARVSRRVALVTPHFTAAL 235 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 A D ++ + + + L + P K+E+P TL+W + +P Sbjct: 236 ATVAATD-MVTTISRALARRFAGAFDLIVKQPPF-------DKVELPMTLVWSHLRNADP 287 Query: 303 KIVWLRETIKNLY 315 +VW RE ++ + Sbjct: 288 LLVWFRELLREIA 300 >UniRef50_B5XW08 Transcriptional regulator, LysR family n=9 Tax=Enterobacteriaceae RepID=B5XW08_KLEP3 Length = 310 Score = 239 bits (612), Expect = 7e-62, Method: Composition-based stats. Identities = 66/322 (20%), Positives = 117/322 (36%), Gaps = 22/322 (6%) Query: 1 MKKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPL 60 M + +DLNLL + + RSV AA+ + ++ SA+S +L++LR+ +DPLF Sbjct: 4 MHPVLRRIDLNLLPVFDAVYRSRSVRLAAEELAMSTSALSHALSRLRSALNDPLFYREGH 63 Query: 61 GLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGLK--FELAAESPLMMIMLNALSKQ 118 + P+ + ++A ++ N L P P ++A + L Sbjct: 64 RMCPSVYASQLAPSIASALKFLNQELTPPAAFVPAASTDCMQIAITDFTAFCVFPTLMHH 123 Query: 119 IYQRYPQATIKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFS 177 + + P +LR + +L + GEVD+ + L + Sbjct: 124 LQREAPGLRFELRYLPHSPALTELLAGEVDLALGFNTPDEPAHPDLEEIN-------WLR 176 Query: 178 DVPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPE 237 D V + D LD +L H+ + LD L+ G R +AM P Sbjct: 177 DEYVVISQAD----RTALTLDAYLAARHLVVTPWNEQQGVLDCELERQGYSRQVAMKTPS 232 Query: 238 FEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKR 297 + F+ Q D L+ A R + + +L + + H+R Sbjct: 233 MLSAPFIIEQSDLLM-ALPRRAAETMARAARLTIF-------PLPFPVPPFDVKIYAHQR 284 Query: 298 NSHNPKIVWLRETIKNLYASMA 319 + WL ++ L A Sbjct: 285 SGKREATRWLIALLQTLVGESA 306 >UniRef50_Q38ZY8 Transcriptional regulator, LysR family n=1 Tax=Burkholderia sp. 383 RepID=Q38ZY8_BURS3 Length = 310 Score = 239 bits (612), Expect = 8e-62, Method: Composition-based stats. Identities = 75/317 (23%), Positives = 126/317 (39%), Gaps = 21/317 (6%) Query: 2 KKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLG 61 + + D+NLL+ LMQERSVT+AA ++ + A+S SL+ LR D LF+ Sbjct: 6 HFDLRSFDMNLLIAFDALMQERSVTRAAAKLRIQQPAMSHSLSTLRLLLRDELFIRVGRT 65 Query: 62 LSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTP--RGLKFELAAESPLMMIMLNALSKQI 119 L PTP +S++ + + L P F +A + + ++L + + Sbjct: 66 LQPTPRALSLQHTVRSSLLQLQEALKTEESFDPSNARRDFRVAMTNGIESLLLPDMVARF 125 Query: 120 YQRYPQATIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSD 178 T+ R+ D D D + RGE+++ E S I LF++ Sbjct: 126 RTDAQGMTLLARSVDPQDMPDMLDRGELNLAIGCYE----------STHPWIRRHELFNE 175 Query: 179 VPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEF 238 D + + T++ PH+ + + L++ L++ E I + P F Sbjct: 176 TLTCCFNPDLLPIKTPIDEQTYVETPHVVVSMRNTILGCLEDALRDARVELNIVSAGPNF 235 Query: 239 EQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRN 298 L MAA +L R Y L +P+ F + P ++WH R Sbjct: 236 LAVLMMAADT-PVLTTLPSRIALRYADRFGLSTCPVPISFSAN-------PIAMVWHARE 287 Query: 299 SHNPKIVWLRETIKNLY 315 P WLR ++ L Sbjct: 288 DREPGSEWLRRLVRELC 304 >UniRef50_Q3IKZ1 Putative transcriptional regulator of the LysR family n=3 Tax=Alteromonadales RepID=Q3IKZ1_PSEHT Length = 315 Score = 239 bits (611), Expect = 9e-62, Method: Composition-based stats. Identities = 64/332 (19%), Positives = 132/332 (39%), Gaps = 34/332 (10%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 +I +DLNLL+ L +L+ E+SV+KAA ++ +T A+S +L +LR FDDPL V + + Sbjct: 1 MNIRNVDLNLLVYLNVLIDEKSVSKAANKLALTQPAMSNALKRLRDLFDDPLLVRASGSM 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGL--KFELAAESPLMMIMLNALSKQIY 120 +PT ++++ + ++M+ + P F + A L ++ + Sbjct: 61 APTAKALALKPEIELLLKMAEEITQPTELFDPTSAKVTFRIMANDYLESTLIAPFITEQL 120 Query: 121 QRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 + P + + +L + +G +D+ + + LP + ++ D Sbjct: 121 SKNPGINFDILSPSDVNLQDMEKGTIDLAINR----------FNGLPRSFHQATVWRDNY 170 Query: 181 CVWLRKDHPALHQTWNLDTFLRYPHISICWEQ-------------SDTWALDNVLQELGR 227 C ++ L Q+ +L+ +L+ HI + +D L +L + Sbjct: 171 CCLTHPNNQFLQQS-SLEDYLKSEHIWVNRAGWGPEPAVTNKSGKQKLGWVDEALWQLEQ 229 Query: 228 ERTIAMSLPEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLE 287 R I + + + Q D L+ R + L + +P + + Sbjct: 230 TRKIRVFTRHYM-IASLLCQSDKLIATLPRRQAKLLTTHTNLVISPVPF-------QIVP 281 Query: 288 VPFTLLWHKRNSHNPKIVWLRETIKNLYASMA 319 + ++W H WLR + ++A Sbjct: 282 IEVKMIWSPLLHHASAHQWLRRELLEFAKTIA 313 >UniRef50_B5ZWA1 Transcriptional regulator, LysR family n=4 Tax=Rhizobium RepID=B5ZWA1_RHILW Length = 311 Score = 239 bits (611), Expect = 1e-61, Method: Composition-based stats. Identities = 67/320 (20%), Positives = 129/320 (40%), Gaps = 23/320 (7%) Query: 2 KKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLG 61 ++ + DLNLL+ LM+ERSVTKAA R+ + A+S +L LR D LFV Sbjct: 9 HFNLWSFDLNLLVAFDALMKERSVTKAAVRLKIQQPAMSHNLGTLRTLLQDELFVRVGQV 68 Query: 62 LSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTP--RGLKFELAAESPLMMIMLNALSKQI 119 + PT + + + + + L + P P F + S L ++++ L+ + Sbjct: 69 MQPTHRALRFAEAVEHILSRTQLAIVTPATFEPGEAEQIFRIGFSSELEVLLVPRLAAML 128 Query: 120 YQRYPQATIKLRNWDYDSLD-AITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSD 178 + P + R + + + + +D+G + +LF Sbjct: 129 NEMAPGIRVLARAVNPELVHKLLDDNVIDLGVGCYDDGN----------NRHRRSLLFEQ 178 Query: 179 VPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEF 238 L +T + D ++ H + + + +D+ L+ + ++++ PEF Sbjct: 179 SLMCCYNPKLLDLPETLDRDAYIGLKHALVSQKDAIEGCIDDALKRINVRLDVSVAAPEF 238 Query: 239 EQSLFMAAQPDNLLLATAP-RYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKR 297 L + L+AT P R + Y L L + +PL S P +++W Sbjct: 239 LTVLTAVLE--APLIATLPTRIVKRYAGLFGLAMAEVPLDLKVS-------PISMVWSAA 289 Query: 298 NSHNPKIVWLRETIKNLYAS 317 ++P W+R + L ++ Sbjct: 290 GDNDPANRWMRSQVTQLVSA 309 >UniRef50_D2I932 Putative LysR family transcriptional regulator n=1 Tax=Pseudomonas reinekei RepID=D2I932_9PSED Length = 320 Score = 239 bits (611), Expect = 1e-61, Method: Composition-based stats. Identities = 66/310 (21%), Positives = 118/310 (38%), Gaps = 20/310 (6%) Query: 9 DLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLM 68 DLNLL L + + +VT AA+R+ ++ A S +LA+LR D LFV S ++ TP Sbjct: 4 DLNLLRVLLAVHEAGNVTAAAQRLGMSQPAASAALARLRRSLGDALFVRSGQTMAATPRA 63 Query: 69 VSMEQNLAEWMQMSNLLLDKPHHQTPRGLK--FELAAESPLMMIMLNALSKQIYQRYPQA 126 S+ E + + + + P F + L L + P A Sbjct: 64 QSIIDRTREVIDIIDRDILSNPVFDPSTSTAPFMFCLSEIGEIAFLPMLLGHLRSVAPLA 123 Query: 127 TIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 I + D + + G+VD+ I + LFS +R Sbjct: 124 QICSLSLAAKDVDEHLREGKVDLVMGYFPDLGA---------ANIYQQRLFSHDLVCLIR 174 Query: 186 KDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMA 245 H H+ LD F H+ + + ++ L + G +R I + + + + + Sbjct: 175 GGHKIRHEQLTLDEFCTLEHVQVRDGGRNQEMYESYLAKAGVKRNIVLQMGHYMSTASII 234 Query: 246 AQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIV 305 + + L++ Y + + V LP F WH R ++P+ Sbjct: 235 ERSN-LVVVLPRTVASLYAKYANVRSVELPDGFPV-------YDIKQYWHARFQNDPRHQ 286 Query: 306 WLRETIKNLY 315 W+R+T++ L+ Sbjct: 287 WIRQTVRTLF 296 >UniRef50_A5CSX6 Putative transcriptional regulator, LysR family n=1 Tax=Clavibacter michiganensis subsp. michiganensis NCPPB 382 RepID=A5CSX6_CLAM3 Length = 306 Score = 239 bits (610), Expect = 1e-61, Method: Composition-based stats. Identities = 69/309 (22%), Positives = 123/309 (39%), Gaps = 19/309 (6%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 + LDLNLL L L+ SVT+AA R+ ++P AVS++L +LR D + V + G+ P Sbjct: 1 MAQLDLNLLRVLDALVATSSVTEAASRLALSPPAVSRALGRLRVSMGDEILVRAGRGMVP 60 Query: 65 TPLMVSMEQNLAEWMQMSNLLLDK-PHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRY 123 TP + + ++ + ++ L + F + L+ ++ AL++++ Sbjct: 61 TPFALRVAASVRALLDEADGLTRAGDDDPSTWNRAFTIRMNESLIPVLAPALTERVVAEA 120 Query: 124 PQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVW 183 P ++ + +A+ G +D+ R + P + L +D Sbjct: 121 PGVLLRFVPQESKDAEALRDGTLDLDVGIRM----------ASPPDVLAAPLVADRFVAV 170 Query: 184 LRKDHPALHQ-TWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 + + T LD +PH+S +D+ L+ GR R + P + + Sbjct: 171 VGARTALGRKTTLTLDDLAAHPHVSASRRGRARGPVDDALEATGRTRRVVAVAPTYAVAA 230 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 M + + P +PL A LPFD V WH+R +P Sbjct: 231 LMVVGSGS--ICLLPELMTERLIDGGVPLRAHRLPFDLP-----GVQVDQRWHRRADADP 283 Query: 303 KIVWLRETI 311 WLR + Sbjct: 284 ASRWLRRAL 292 >UniRef50_A9FS02 LysR-family transcriptional regulator n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9FS02_SORC5 Length = 307 Score = 239 bits (610), Expect = 1e-61, Method: Composition-based stats. Identities = 69/299 (23%), Positives = 116/299 (38%), Gaps = 21/299 (7%) Query: 21 QERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSMEQNLAEWMQ 80 +ER VT+AAKR+ +T SA S+ L +LR +F D L L+ TP ++ LA+ + Sbjct: 20 RERHVTRAAKRLGITQSAASQRLGRLREFFGDALLAPGRPLLALTPRAEALADPLAQALA 79 Query: 81 MSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQIYQRYPQATIKLRNWDYDSL 138 + P +F L L + L L + + P T+++ + D + Sbjct: 80 SLRAAVQAGAPFDPATSERRFVLLGNDLLEAVALPRLLPMLAREAPYITVQVDRAEADFV 139 Query: 139 DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPALHQTWNLD 198 + RG D+ F +P + L + +R+DHPA + L+ Sbjct: 140 RRLERGTADLAFVPEFL----------VPPSSRQLRLPEEGFVTLMRRDHPAASRRLTLE 189 Query: 199 TFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQPDNLLLATAPR 258 +L H+ I +D L+ GR R I + F F+ A D L+ T P Sbjct: 190 RYLELGHVLIAPHGMPGSLVDRALEARGRRRRIVAQVQHFVTVPFLIAASD--LVVTCPA 247 Query: 259 YCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWLRETIKNLYAS 317 + L P+ + + +WH+R +P WLR + + Sbjct: 248 TVAAVSTPFGLRAARPPVELGVDRS-------SAVWHERVHDDPGHRWLRSWLSKAIRA 299 >UniRef50_A0NXF9 Probable transcription regulator protein n=2 Tax=Rhodobacteraceae RepID=A0NXF9_9RHOB Length = 312 Score = 239 bits (610), Expect = 1e-61, Method: Composition-based stats. Identities = 64/318 (20%), Positives = 114/318 (35%), Gaps = 22/318 (6%) Query: 1 MKKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPL 60 M +D L L + Q RS T+AA+ + V SAVS ++ KLR F DPLFV Sbjct: 1 MPADPLDVDFRALQVLVWVHQLRSFTRAAEELGVNQSAVSYTINKLRDVFQDPLFVRQAR 60 Query: 61 GLSPTPLMVSMEQNLAEWMQMSNLLLDKP-HHQTPRGLKFELAAESPLMMIMLNALSKQI 119 L PT + L P F +A ++++ + + Sbjct: 61 RLHPTQRCEDIVLQAKRLTSEFRQLAAPPDFDPLTASQTFTIACNFYERVLIIPEIVHFL 120 Query: 120 YQRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 + P +++ + + + R E D+ L+ D Sbjct: 121 KREAPNLDLEIIDASGIGHERLLRNEADLLIGP----------FERSDPHFYRRDLYQDR 170 Query: 180 PCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFE 239 L +HP + +L+ +L H+ + + L+ + ++ +A+ +P Sbjct: 171 YVCLLDPEHPKAGSSLSLEDYLDLDHVLVTYGGQWRSRYIIELERMNKDLKVALRVPSPA 230 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 + A + L+AT P + L +V P+ V +L+W N Sbjct: 231 GLERLVAGSN--LVATVPERLS-MSVAEGLRVVPCPV--------HTSVTISLVWTTLNH 279 Query: 300 HNPKIVWLRETIKNLYAS 317 P +W+RE + L A Sbjct: 280 RAPLHLWVREMVYRLNAR 297 >UniRef50_C3MFM7 Putative transcriptional regulator, LysR family n=1 Tax=Rhizobium sp. NGR234 RepID=C3MFM7_RHISN Length = 409 Score = 238 bits (609), Expect = 2e-61, Method: Composition-based stats. Identities = 72/325 (22%), Positives = 129/325 (39%), Gaps = 28/325 (8%) Query: 4 SITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLS 63 ++ DLNLL L++ERSVT+A +I ++ AVS +L +LR DD LF+ + Sbjct: 44 NLNAFDLNLLRVFDALIRERSVTRAGDQIGLSQPAVSSALRRLRDLLDDQLFIRRGNDMI 103 Query: 64 PTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQIYQ 121 PTP + + + + + L L K H P +F L ++ ++ALS+ + Sbjct: 104 PTPRALELGSPVRDALGKIELALHKRRHFDPATIQRRFTLLGSDIFSVMAMSALSRCCAE 163 Query: 122 RYPQATIKLRNWDYDSLDAITRGE-VDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 P ++ L + + + + + + VDI ++P + L + Sbjct: 164 EAPGISLHLVDSALGNAERLLQEDAVDIALETEL----------NVPDWVSSMPLLAAPY 213 Query: 181 CVWLRKDHP-------ALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAM 233 V HP A + LD F R H++ +D L ++GR+R +A+ Sbjct: 214 VVVASARHPGITAAGVAAREAIPLDLFCRLHHVARSSAGVVNCVVDAELAKVGRKRHVAL 273 Query: 234 SLPEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLL 293 ++P A L ++ + L + P+P + + Sbjct: 274 TMPHTLGVAVATANS-LHLATVPRQFAELMASHLGLKIYEAPVPLPATN-------INVF 325 Query: 294 WHKRNSHNPKIVWLRETIKNLYASM 318 WH R+ +P WLR I + Sbjct: 326 WHSRHDGDPAHQWLRRQIVRVRDEF 350 >UniRef50_C3K6Q2 Nodulation protein D n=1 Tax=Pseudomonas fluorescens SBW25 RepID=C3K6Q2_PSEFS Length = 304 Score = 238 bits (609), Expect = 2e-61, Method: Composition-based stats. Identities = 56/300 (18%), Positives = 119/300 (39%), Gaps = 21/300 (7%) Query: 22 ERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSMEQNLAEWMQM 81 E+++T+A +R+ ++ A S +LA+LR +F D L V + + TP ++ Q + + + Sbjct: 20 EQNITRAGERLFLSQPATSAALARLREYFQDQLLVPNGRKMVRTPKGEALIQPVRDLLIQ 79 Query: 82 SNLLLDKPHHQTPR--GLKFELAAESPLMMIMLNALSKQIYQRYPQATIKLRNWDYDSLD 139 L+ P KF L A + ++L +S+++ + P A++++ + + Sbjct: 80 MRSTLENRAEFEPAQSQRKFVLMASDYVCTVLLPQVSRRLNELAPMASLEMIPPNDTPRE 139 Query: 140 AITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPALHQTWNLDT 199 + RG VD+ + L +F D +D+P + + + + Sbjct: 140 TLERGNVDLLVLPA----------THLGDDHPSLTIFEDRFVCMTCQDNPLVGDSLSFEQ 189 Query: 200 FLRYPHISICWEQSDTWALDNV-LQELGRERTIAMSLPEFEQSLFMAAQPDNLLLATAPR 258 + + H+ + W ++D L ER + + F + R Sbjct: 190 YKQMGHVLVRWGMQRVPSMDEWFLNRYNFERRVEVITNAFSNVPTFLPGT-LRIATMHLR 248 Query: 259 YCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWLRETIKNLYASM 318 Q + L ++ +P + + W++ H+P + WLR I A+M Sbjct: 249 LAQQCARELPLKILPVP-------WDAPTLVMAIQWNRHQQHDPGLSWLRSLIVESAAAM 301 >UniRef50_A8H3B3 Transcriptional regulator, LysR family n=7 Tax=Gammaproteobacteria RepID=A8H3B3_SHEPA Length = 304 Score = 238 bits (609), Expect = 2e-61, Method: Composition-based stats. Identities = 64/322 (19%), Positives = 121/322 (37%), Gaps = 25/322 (7%) Query: 1 MKKSI-TTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSP 59 M ++ D NLL+ + Q RS+T AA + +T VS +L +L+A LFV Sbjct: 1 MGNNMDKRFDFNLLVIFLEVYQLRSITLAADSLGLTQPGVSAALKRLQATLGVELFVREG 60 Query: 60 LGLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNALSKQ 118 G+SPT + + ++ N L + F + + P+M ++ + Sbjct: 61 RGISPTNAAIQLASQVSPAYNTVNSALSNVAGFDKQTPRSFLVYVDEPMMNLLQP--LAE 118 Query: 119 IYQRYPQATIKLRNW---DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVL 175 I + + L ++ + D+ + L+ ++ Sbjct: 119 QDSDMGNCEIMFQLPPIEEERLLQQLSLQKADLAIDVGQLP----------SLSYSNQLF 168 Query: 176 FSDVPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSL 235 + + + RK HP ++ F + HI++ ++ ALD +E+ ER ++ Sbjct: 169 YRESVTMICRKGHPRINGKIGKIQFYQEKHITLQIRRATLTALDFFTEEVIGERKVSCEC 228 Query: 236 PEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWH 295 + + ++ D + + T+ Y L + P V ++WH Sbjct: 229 HSLLSMMALVSESDCIAI-TSRSIADKYADKFGLQSIEPPF-------NTKPVLHNMMWH 280 Query: 296 KRNSHNPKIVWLRETIKNLYAS 317 KRN NP WLRE + L Sbjct: 281 KRNEFNPAHTWLREKLNQLVKQ 302 >UniRef50_Q2CK92 Transcriptional regulator, LysR family protein n=1 Tax=Oceanicola granulosus HTCC2516 RepID=Q2CK92_9RHOB Length = 309 Score = 238 bits (609), Expect = 2e-61, Method: Composition-based stats. Identities = 70/317 (22%), Positives = 132/317 (41%), Gaps = 18/317 (5%) Query: 4 SITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLS 63 ++ +D +LL LM+ R T+ A+ + +T AVS +L +LR ++DPLF+ GL Sbjct: 8 NLRLIDTTVLLIFLSLMRHRKATEVAREMGLTQPAVSHALKRLRTLYEDPLFLRRAHGLE 67 Query: 64 PTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQIYQ 121 PT L +E + +++ + L+ P P + A + ++ L+ ++ Sbjct: 68 PTALAHELEPKIRRIVRLLSQTLENPDQFDPASTATDLRIGAFDYELTTVIPKLAAEMRT 127 Query: 122 RYPQATIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 P + Y ++LDA+ G +D+ + RS E L+S+ Sbjct: 128 LSPSINVHAYPLVYTEALDALVHGRLDLAIGYFDIPLRSE-------ATFVVEDLYSERY 180 Query: 181 CVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQ 240 + R+ HP L L+ + H+ + +D L+ G +R I +P Sbjct: 181 VLAGRRGHPLLSDNPTLEEMAQADHLLVSPHGLIRNRVDEALRMQGYQRNIRTVVPSLFA 240 Query: 241 SLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 +L + + L+ T P +V PLP D + + H R+++ Sbjct: 241 ALSIIENSE--LVMTLPERVA-VGNWQPFDIVHKPLPIDV-----GDFQLQAVRHARDAN 292 Query: 301 NPKIVWLRETIKNLYAS 317 +P WL E ++ + +S Sbjct: 293 SPLHAWLLENLRRIVSS 309 >UniRef50_B5F9Z3 Transcriptional regulator, LysR family n=3 Tax=Vibrionales RepID=B5F9Z3_VIBFM Length = 309 Score = 238 bits (608), Expect = 2e-61, Method: Composition-based stats. Identities = 73/322 (22%), Positives = 133/322 (41%), Gaps = 22/322 (6%) Query: 1 MKKSI-TTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSP 59 M K + TLDLNLL +L QE ++ KA++R+ V+ A+S++L KLR F+D LF+ Sbjct: 1 MAKDLFATLDLNLLRTFLILSQELNMRKASERLFVSQPAISQALQKLRNHFNDELFIKVR 60 Query: 60 LGLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGL--KFELAAESPLMMIMLNALSK 117 GL PTP + +N+ ++ + +L+ P L ++A ++ + AL Sbjct: 61 HGLKPTPFAEELAENIQPYLDGLSSVLNASQEFKPENLNKTIKIALAPQVLTCLSGALFH 120 Query: 118 QIYQRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFS 177 I ++ P ++L NW + D + +G++D+ + +P + + L + Sbjct: 121 DIKEKAPNVDLQLVNWSESTFDDLAKGKLDLAINYE---------YDKVPKELLSKNLIT 171 Query: 178 DVPCVWLRKDHPALHQTWNLDTFLRYPHI--SICWEQSDTWALDNVLQELGRERTIAMSL 235 CV +R +HP F Y I + VL + E I Sbjct: 172 ITGCVIVRINHPIEKTVATPYDFEGYELASLIIPGWNDNKSLASEVLTNMDIEHKIGFRS 231 Query: 236 PEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWH 295 + + D +T+ Y+ L ++ L +P P +H Sbjct: 232 ELPMALIDVIQHTDMYFPSTSLFPIHQYSSLRRIDLSLDDVPL--------NYPIYTYYH 283 Query: 296 KRNSHNPKIVWLRETIKNLYAS 317 +R+ N W+ + I +L + Sbjct: 284 QRHKKNALHAWINQLITDLLSE 305 >UniRef50_A9AMZ1 Transcriptional regulator, LysR family n=6 Tax=Proteobacteria RepID=A9AMZ1_BURM1 Length = 353 Score = 238 bits (608), Expect = 2e-61, Method: Composition-based stats. Identities = 67/304 (22%), Positives = 125/304 (41%), Gaps = 25/304 (8%) Query: 22 ERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSMEQNLAEWMQM 81 ERSVT AA+R+N++ SA S++LA+LRA D L + + L TP + + + + Sbjct: 52 ERSVTGAARRLNLSVSATSRTLARLRALTGDRLLLQAGRTLVLTPYAEQLSRRIPALARE 111 Query: 82 SNLLLDKPH-HQTPRG--LKFELAAESPLMMIMLNALSKQIYQRYPQATIKLRNWDYDSL 138 + +L + +F L A + ++ AL+ ++ + P ++ + Sbjct: 112 AESVLSRAAYRFDSATLAQRFTLCAGEGFVDLLGAALTNRVRRAAPGVQLRFVPKPDWNA 171 Query: 139 DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHP-ALHQTWNL 197 A+ G VD+ ++ + I VLF+D R HP ++ Sbjct: 172 QALREGLVDLEIG----------VVKTAAPEIRTRVLFTDRYVGLCRIGHPLLAAGEIDM 221 Query: 198 DTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQPDNLLLATAP 257 +L Y H++I +D L+ G R + + +P + ++ + D L + Sbjct: 222 QRWLAYDHVTISRTGEADNPIDARLESTGVPRNVPIVVPSYTGAMQLVRHSDLLAIVPHS 281 Query: 258 RYCQY----YNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWLRETIKN 313 Y + + ALPLP + +WH R H+P WLR+ ++ Sbjct: 282 CLGNAFMPDYAAENGVQSFALPLPLPA-------FNISAIWHPRLDHDPAHRWLRDEVRA 334 Query: 314 LYAS 317 + A+ Sbjct: 335 VCAA 338 >UniRef50_D0XU87 Transcriptional regulator, LysR family n=1 Tax=Caulobacter segnis ATCC 21756 RepID=D0XU87_9CAUL Length = 305 Score = 237 bits (607), Expect = 3e-61, Method: Composition-based stats. Identities = 69/303 (22%), Positives = 123/303 (40%), Gaps = 25/303 (8%) Query: 21 QERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFV--NSPLGLSPTPLMVSMEQNLAEW 78 Q+R++T AA R+ ++ A+S L +LRA D LFV S G+ PTP ++ +A+ Sbjct: 20 QDRNITHAAGRLGISQPALSARLTRLRALLGDRLFVPAPSGRGVVPTPRAEALTPLIADV 79 Query: 79 MQMSNLLLDK-PHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQATIKL-RNWDYD 136 ++ +++ T F LA + +++ L++++ P ++L Sbjct: 80 LRGIAAVMEPGTFDPTSSNRVFTLALQENPAIMLGPGLARRVRAAAPGLRLRLAVPDRKQ 139 Query: 137 SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPALHQTWN 196 + G+VDI G + LF D RKDHP + Sbjct: 140 IPALLESGDVDIFVGGA----------TDADNGWIGRSLFDDDFATAQRKDHPRGTGPMD 189 Query: 197 LDTFLRYPHISICWEQS-DTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQPDNLLLAT 255 L+ F + H+ + +D L+ +GR R +AMS+ + + + A D LL Sbjct: 190 LEAFCDHAHLLVSSAGDPFAGVIDKALEAIGRRRFVAMSVQSYAVAPTIIAGSD-LLCTL 248 Query: 256 APRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWLRETIKNLY 315 R + ++ L L P+ V + WH R+ + WLRE + Sbjct: 249 PTRMLRRFDAA--LDLFTPPVSL-------KAVAISAYWHPRHQEDLGHRWLREQLFAAA 299 Query: 316 ASM 318 ++ Sbjct: 300 GAV 302 >UniRef50_Q0VH46 Putative LysR type regulator n=3 Tax=Proteobacteria RepID=Q0VH46_9PSED Length = 308 Score = 237 bits (607), Expect = 3e-61, Method: Composition-based stats. Identities = 68/312 (21%), Positives = 116/312 (37%), Gaps = 21/312 (6%) Query: 9 DLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLM 68 DLNLL + L ++ SV+ AA + VT AVS SL +LR + D LF + PTP Sbjct: 11 DLNLLFAFEALWRDHSVSIAADNLGVTQGAVSSSLKRLRQEYGDRLFTVVGRRMEPTPFA 70 Query: 69 VSMEQNLAEWMQMSNLLLDKPHHQTPRGLK--FELAAESPLMMIMLNALSKQIYQRYPQA 126 V + L E + + + +P+ + F + + L + K + + P + Sbjct: 71 VQIAPTLLEALDLVREAQSRALEFSPQHCRKVFTVRTRDIGEAVCLPTILKMLQTQAPMS 130 Query: 127 TIKLRNWD-YDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 I ++L ++ G +D+ L +L I ++ S LR Sbjct: 131 RINTVASSVEETLIGLSTGRIDLAIGY----------LPTLKTDIHRTIVSSQHYVCALR 180 Query: 186 KDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMA 245 + HP L+ FL H+ + + L+ L E G I + +P++ + + Sbjct: 181 RGHPLADAELTLERFLAQQHLLVETGGTGHVLLERALIEAGARHNIGVRIPQYLSAPHLL 240 Query: 246 AQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIV 305 + D L + P L+ E L WH R +P+ Sbjct: 241 LESDMLWV--VPNVLGKTLSRFFPLLLK------PLPLVLPEFDIALYWHDRFHRDPQNK 292 Query: 306 WLRETIKNLYAS 317 W RE + Sbjct: 293 WFREMLAAALRE 304 >UniRef50_A8T595 Transcriptional regulator, LysR family, putative n=3 Tax=Vibrio RepID=A8T595_9VIBR Length = 301 Score = 237 bits (607), Expect = 3e-61, Method: Composition-based stats. Identities = 67/316 (21%), Positives = 122/316 (38%), Gaps = 25/316 (7%) Query: 1 MKK-SITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSP 59 M T+LD LL + + +SVTKAA+ + VT S VS L +LR D LFV S Sbjct: 7 MNNFDYTSLDGRLLRMFISVYENQSVTKAAESLKVTQSTVSHGLNQLRKIVKDELFVASG 66 Query: 60 LGLSPTPLMVSMEQNLAEWMQMSNL-LLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQ 118 ++PTP + + E + + + + F +AA + ++ + + Sbjct: 67 RSIAPTPKATELIHHAREIVIAMQTFASQQQYDPSIDTASFTVAANDYEIETIIKPMFHR 126 Query: 119 IYQRYPQATIKLRNWDYDS--LDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLF 176 + P++++ + + G VD+ S + S + + Sbjct: 127 FQEEAPKSSLHIAPARTQLQWASLLRSGNVDLVLSPELTSNES---------DLVQTKVL 177 Query: 177 SDVPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLP 236 SD + LD + + PH + + QS +D +L +LG+ R + + P Sbjct: 178 SDQDVCFYNPS--KQSAPKTLDQYCQMPHAIMSFGQSHHTEIDTLLHKLGKRRRVVTTAP 235 Query: 237 EFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHK 296 F + + + ++AT P Q PLPF+ +WH Sbjct: 236 SFASIASLIKETN--IIATMP---ARLAQSIFKDFEQAPLPFELP-----PFNIVKVWHN 285 Query: 297 RNSHNPKIVWLRETIK 312 RN + + W ++ +K Sbjct: 286 RNKQSQRHAWFKDLMK 301 >UniRef50_Q2KBI7 Probable transcriptional regulator protein, LysR family n=3 Tax=Rhizobium etli RepID=Q2KBI7_RHIEC Length = 298 Score = 237 bits (607), Expect = 3e-61, Method: Composition-based stats. Identities = 59/297 (19%), Positives = 112/297 (37%), Gaps = 22/297 (7%) Query: 22 ERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSMEQNLAEWMQM 81 E+SV+ AA+R+ ++ SA+S++L++LR DP+ V + G+ TP +++ +++ Sbjct: 18 EQSVSAAARRLGLSTSAMSRTLSRLRTALGDPILVPAGRGMVATPHALAIAEDVHLLKDA 77 Query: 82 SNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQIYQRYPQATIKLRNWDYDSLD 139 +L P R F + A +++ LS + P ++ + Sbjct: 78 VKAVLSPPSTVDIREVRRHFTIRANEAFVLLYAADLSAAVTNAAPGIRLRFAPRSDKDVQ 137 Query: 140 AITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPAL-HQTWNLD 198 A+ +D+ +L + + LF D R HP + Sbjct: 138 ALREAAIDLDIG----------VLPRDSGELRCQSLFEDRFVGVARVGHPIFEADRITAE 187 Query: 199 TFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQPDNLLLATAPR 258 + H+ + +D L ELG R + +P F + +AA D L+ + P+ Sbjct: 188 RYAACGHVLFSTQADYAGPVDRALGELGLHRDARLIVPSFPAVIAVAAASD--LIGSVPK 245 Query: 259 YCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWLRETIKNLY 315 + ++ LP+ WH R +P WLR I + Sbjct: 246 SYCKSGAMREIRTFDLPVAVP-------GFNIVQAWHPRMDADPAHRWLRALIFETF 295 >UniRef50_Q89SA1 Transcriptional regulatory protein n=1 Tax=Bradyrhizobium japonicum RepID=Q89SA1_BRAJA Length = 305 Score = 237 bits (606), Expect = 3e-61, Method: Composition-based stats. Identities = 60/307 (19%), Positives = 119/307 (38%), Gaps = 21/307 (6%) Query: 14 LCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSMEQ 73 L L++E +V++AA RI ++ A S +L +LR F DPL V + + TP ++ Sbjct: 12 TALDALLREANVSRAAMRIGLSQPATSHALQRLRDIFGDPLLVRTGARMELTPRAQALRA 71 Query: 74 NLAEWMQMSNLLLDK-PHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQATIKLRN 132 LA+ + L +F L + +++ L +++ + P + + Sbjct: 72 PLAQALDQVRGLFVPDEFDAARSERQFRLMMPDLAVELLMPPLMEKVTRAAPNVRVDVVP 131 Query: 133 W-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPAL 191 W A +D+ S + ++L++D + +R+ HP Sbjct: 132 WRGPAIFHAEFARTIDLVISIGNAF-----------KGFHRQLLYTDSDALAVRRGHPMG 180 Query: 192 HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQPDNL 251 + +TFL H+ + + +D L+ G ER IA+ + + ++L +AA+ D + Sbjct: 181 AKLKRRETFLAARHVGVIIRGNSEDLIDTWLRAKGIERHIALVVSGYLEALHVAARTDLV 240 Query: 252 LLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWLRETI 311 R ++ L V PL + + R + +WLR + Sbjct: 241 AFV-PRRLIAALSRQLGLDTVTPPL-------DPGIDEQFMFYPTRAQMDSGSIWLRRLM 292 Query: 312 KNLYASM 318 + Sbjct: 293 LETGREL 299 >UniRef50_A3KIZ0 Putative LysR-family transcriptional regulatory protein n=3 Tax=Streptomyces RepID=A3KIZ0_STRAM Length = 312 Score = 237 bits (606), Expect = 3e-61, Method: Composition-based stats. Identities = 71/318 (22%), Positives = 120/318 (37%), Gaps = 25/318 (7%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 + T DLNL LL + SVT A+ ++VT VS SL KLR F D LF + GL+P Sbjct: 1 MGTFDLNLARVFVLLYETGSVTATAETLHVTQPTVSYSLGKLRRHFGDELFRRNGRGLTP 60 Query: 65 TPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQIYQR 122 T + + L + + + + +F +A +L L +R Sbjct: 61 TAGARRLYEPLQRALAEIDGTVRQGDAFDAGTMSGRFTIALSDLGEATLLPRLLAAARER 120 Query: 123 YPQATIKLRNWD-YDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPC 181 P + +R +D D+ + RG++D+ + + LF + Sbjct: 121 APGVSFTVRPFDVEDAESQLRRGDLDVFVATPVITSHLTVRIP----------LFRERYV 170 Query: 182 VWLRKDHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQ 240 + + DHP + L H ++ + S A VL G +A+ F Sbjct: 171 LMVAADHPRVRGDEVTLAGLAAEHHATV-FGPSGHVAPRAVLAAHGLLERVAVDATRFSM 229 Query: 241 SLFMAAQPDNLLLATAPRYC-QYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 ++ Q D L+A P Y + + H++ LV LP + L +S Sbjct: 230 LPYLLEQTD--LVAIVPEYVGEVFTASHRVRLVRLPFE-------TQPIEIALYARHESS 280 Query: 300 HNPKIVWLRETIKNLYAS 317 +P WL + + + Sbjct: 281 RSPAQRWLVQFMAEVLGE 298 >UniRef50_Q5ZSW4 Regulatory protein (LysR transcriptional regulator) n=4 Tax=Legionella pneumophila RepID=Q5ZSW4_LEGPH Length = 306 Score = 237 bits (606), Expect = 4e-61, Method: Composition-based stats. Identities = 63/320 (19%), Positives = 126/320 (39%), Gaps = 19/320 (5%) Query: 1 MKKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPL 60 M ++LNL+L L L+ ERSV+ AA+++ V+ A+S SL +LR F DPL + Sbjct: 1 MAIPFKRINLNLILHLDALLSERSVSAAAEKVFVSQPAMSSSLKQLRELFKDPLLIPGKG 60 Query: 61 GLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTP--RGLKFELAAESPLMMIMLNALSKQ 118 +P ++ L + M +L P F++A + +I+L +L Sbjct: 61 EYFLSPKAKELQPQLEQVMFFIRNILQPNERFDPFQTKRSFKIALPDYVELILLPSLMAA 120 Query: 119 IYQRYPQATIKLRNWD-YDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFS 177 + + P I+ D VD+ + SL + E L+ Sbjct: 121 LEKL-PHIVIETTIQSMADDPHLFIDENVDLAIGAINEN--------SLSAQLKVEKLYE 171 Query: 178 DVPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPE 237 + + K++P +++ +L+ ++ HI+ + Q L + R + + Sbjct: 172 EEIICFASKNNPLINRPLSLEDYISNKHIAFSFNQERYSHSAEYLYKRKLVRNDMLFVKN 231 Query: 238 FEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKR 297 ++F A D ++ + + L + LP + P L+ H + Sbjct: 232 ILPAIFAVANSDAVISTAPSFLINMFARQFNLGMQPLPFNLE-------PTPIYLVTHSK 284 Query: 298 NSHNPKIVWLRETIKNLYAS 317 + ++ + WL + + + S Sbjct: 285 SQYDEGVSWLAKLVSSSIKS 304 >UniRef50_Q1Z9L0 Putative transcriptional regulator, LysR family protein n=1 Tax=Photobacterium profundum 3TCK RepID=Q1Z9L0_PHOPR Length = 320 Score = 237 bits (605), Expect = 5e-61, Method: Composition-based stats. Identities = 85/322 (26%), Positives = 146/322 (45%), Gaps = 14/322 (4%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFD----DPLFVNS 58 +I +DLNLL + LL++E SV+ A R+N+T SAVSK L +LR DPLFV + Sbjct: 1 MNINHIDLNLLRLMLLLLEEGSVSSVATRLNLTQSAVSKQLTRLREQLGGELNDPLFVRT 60 Query: 59 PLGLSPTPLMVSMEQNLAEWMQMSNLLLDK-PHHQTPRGLKFELAAESPLMMIMLNALSK 117 GL PT V +EQ L W+Q S + +F+++ +++ L Sbjct: 61 GRGLEPTAQAVKLEQPLRHWLQSSQKMFVPDTFIPAEDKREFQISICETSFSVVVPLLLP 120 Query: 118 QIYQRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDY-EVLF 176 ++++ P I + + DSL + G++D+ +++ R++ L L+ Sbjct: 121 KLHRLAPGMKINIVSKSADSLQRLREGQLDLLVIAKDTDQRAQISSQVTELKRQSNHELY 180 Query: 177 SDVPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLP 236 D LR +HP L + W FL+ P I + E++ W LD V+ E G +P Sbjct: 181 QDHHVCLLRSEHPILEKKWGNAAFLQVPQIRVLVEENKFWLLDQVVAESGHCLDSKTIVP 240 Query: 237 EFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHK 296 +F + + D +L+ T+ + + + + L + LP V + +LW + Sbjct: 241 DFNSAALLVQHTDMMLVCTS-IFARKLAKSYSLQQLPLPF-------NLKPVSYRMLWPE 292 Query: 297 RNSHNPKIVWLRETIKNLYASM 318 H+ +WLR I + Sbjct: 293 TLEHDAAHLWLRGIISGCCQEL 314 >UniRef50_D0XGK1 Putative uncharacterized protein n=1 Tax=Vibrio harveyi 1DA3 RepID=D0XGK1_VIBHA Length = 326 Score = 236 bits (604), Expect = 6e-61, Method: Composition-based stats. Identities = 76/320 (23%), Positives = 136/320 (42%), Gaps = 22/320 (6%) Query: 1 MKKSI-TTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSP 59 M K + + LDLNLL +L QER++ +AA+R+ V+ AVSK+L +LR F+D LFV + Sbjct: 14 MAKDLFSNLDLNLLRTFIILHQERNMRRAAERLFVSQPAVSKALQRLRDHFEDELFVKTH 73 Query: 60 LGLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSK 117 GL T + +NLA + ++ L+ P ++A ++ + + + Sbjct: 74 HGLRATEYANDLAENLAPLLDEISITLNGSKAFNPLEMNGTIKIALAPFILSSYASEICQ 133 Query: 118 QIYQRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFS 177 I Q P I L NW ++D I + +V +G + ++ P + +++ Sbjct: 134 AIRQAAPNVQIHLLNWSRSTMDEIIKDDVTLGVNYE---------INHAPKELLTKMIVK 184 Query: 178 DVPCVWLRKDHPALHQTWNLDTFLRYPHISICW--EQSDTWALDNVLQELGRERTIAMSL 235 D C ++RKDHP + ++ S + +++ G E IA Sbjct: 185 DTFCAYVRKDHPFPGDRLQISDCRDLEFATVIAADWNSSVSFSEKIMKIKGVEPKIAFRS 244 Query: 236 PEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWH 295 + + A D + A+ +QL +L + E +E +H Sbjct: 245 ELPSAIIDVVANSDMVFPASKTVNVDKISQLRRLDI--------EFDGIVIEPCLHAYYH 296 Query: 296 KRNSHNPKIVWLRETIKNLY 315 +N N + WLR I ++ Sbjct: 297 HKNRRNEMVHWLRSIITDVI 316 >UniRef50_A9F1C1 Transcriptional regulator, LysR family n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9F1C1_SORC5 Length = 303 Score = 236 bits (604), Expect = 7e-61, Method: Composition-based stats. Identities = 64/315 (20%), Positives = 114/315 (36%), Gaps = 23/315 (7%) Query: 7 TLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTP 66 LDLNLL ++ + SVT+AA R+ +T AVS +L +L A PLFV S G++ T Sbjct: 8 NLDLNLLRVFAVVAEAGSVTEAASRLYLTQPAVSAALRRLTATIGAPLFVRSGRGVALTS 67 Query: 67 LMVSMEQNLAEWM-QMSNLLLDKP-HHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYP 124 + +L + + L P L + +L L + + + P Sbjct: 68 RGERLRASLKPHLGALIEAALAPPAFDPKTCERTLRLGLSDTAEVWLLPPLLRALEREAP 127 Query: 125 QATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 + + + ++ A G VD + + LP + + L Sbjct: 128 RMRVVAVPVQFRTVGAALAGGVDAAITVAD----------DLPSNVCRKRLLKTGFTCLY 177 Query: 185 RKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 H L + + + H+ + + ++++L G+ R I S+ F + Sbjct: 178 DPRHARLRK-LTEAQYFAHDHVIVSYNGDLRGFVEDLL---GKTRRIRCSVASFSNLGAL 233 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 +LAT P + + L PLPF+ LLW + Sbjct: 234 IDGT--AMLATVPEIVADDIRAVRPHLRTKPLPFEVQPGY-----MDLLWPAATDDDEAC 286 Query: 305 VWLRETIKNLYASMA 319 + RE I + ++ Sbjct: 287 KFAREKIVQIARPLS 301 >UniRef50_P55733 HTH-type transcriptional regulator syrM 2 n=13 Tax=Proteobacteria RepID=SYRM2_RHISN Length = 339 Score = 236 bits (604), Expect = 7e-61, Method: Composition-based stats. Identities = 75/314 (23%), Positives = 127/314 (40%), Gaps = 21/314 (6%) Query: 4 SITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLS 63 ++ ++DLNLL+ L+ L+Q R++T AA+ + + A+S++L++LR F+D L V GL Sbjct: 28 NLASVDLNLLVELEALLQYRNITHAAQHVGRSQPAMSRALSRLRDMFNDDLLVRGSSGLV 87 Query: 64 PTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRY 123 PTP + Q L + L+ K +A +++L L ++ +R Sbjct: 88 PTPQAEHLAQMLPSVLNAIRELVSCSSGLRDLRSKVTMAMPDHQSLVLLPYLLPRLGERV 147 Query: 124 PQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVW 183 P I +L + +GE+D + + P L++D Sbjct: 148 PHVDIVTEPLLDGALRRLEQGEIDFAIG----------QIGAAPPGYLRRGLYADRFTCL 197 Query: 184 LRKDHPALHQTWNLDTFLRYPHISI-CWEQSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 LR DHPAL Q W++ TF H SI + + L G I + + Sbjct: 198 LRHDHPALEQEWSVGTFAALRHASIASDSNEGLGQVYDGLVRFGLPGPIV--VSNVLTAA 255 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 + A D +L+ R + L +V P+ L+WH+R H+ Sbjct: 256 VVVAMTDLVLM-IPNRVATRVATMLPLAIVDPPVEL-------KPYEVALIWHQRCHHDL 307 Query: 303 KIVWLRETIKNLYA 316 + LR I Sbjct: 308 EHRVLRREIAAAAR 321 >UniRef50_Q1ZB78 Transcriptional regulator, LysR family protein n=1 Tax=Photobacterium profundum 3TCK RepID=Q1ZB78_PHOPR Length = 305 Score = 236 bits (603), Expect = 8e-61, Method: Composition-based stats. Identities = 59/321 (18%), Positives = 119/321 (37%), Gaps = 22/321 (6%) Query: 1 MKKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPL 60 M ++ DLNLL + S TKAA+ +++T S+VS ++ +L+ + LF+ + Sbjct: 1 MSQN-KHFDLNLLRVFLSVYNTCSFTKAAEELDLTQSSVSNAILRLKKTVGEELFIRAGR 59 Query: 61 GLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTP--RGLKFELAAESPLMMIMLNALSKQ 118 G+ PT + + L M ++ P +F + A ++ I+ L K Sbjct: 60 GIQPTAVANQLYHQLENSMLKVEQTVNSFEQFDPLHTAREFHVYAIESVIHILQPRLDKY 119 Query: 119 IYQRYPQATIKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFS 177 + P + D + ++D+ + S + E + S Sbjct: 120 LKDYAPTIIFHELPAQEQQMYDQLQAEQIDVVLDIVQPDVVS----------LSSEAILS 169 Query: 178 DVPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPE 237 + C + + HP +++ + + FL H+ + + D E R + Sbjct: 170 EKMCCVVSRHHPRINEVLSKEQFLEESHVFFNMRRFNLTIADYFTYERLPYRKMYCEHSS 229 Query: 238 FEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKR 297 L A+ + + +A + + +L L+ P K + ++W R Sbjct: 230 LMSMLATTARSEAISMA-PYSLAKQCEGMFELRLIDSP-------YKTKPINIFMVWPSR 281 Query: 298 NSHNPKIVWLRETIKNLYASM 318 +N WLRE I + + Sbjct: 282 LKNNTSHTWLREAILTVSKEL 302 >UniRef50_A6CXP0 Transcriptional regulator, LysR family protein n=2 Tax=Vibrionaceae RepID=A6CXP0_9VIBR Length = 310 Score = 236 bits (603), Expect = 9e-61, Method: Composition-based stats. Identities = 57/318 (17%), Positives = 113/318 (35%), Gaps = 26/318 (8%) Query: 6 TTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPT 65 DLNLL + SVTK+A+R+++T SAVS +L +L+ LF + G+ PT Sbjct: 12 KKFDLNLLRVFISTYETESVTKSAERLDLTQSAVSNALTRLKENVGKELFSRTGRGIKPT 71 Query: 66 PLMVSMEQNLAEWMQMSNLLLDKPHHQTP--RGLKFELAAESPLMMIMLNALSKQIYQRY 123 + + + + ++ P F + M+ + L + Y Sbjct: 72 RYAKELYEQTHDHIMSIEKVIQGLEAFDPKKTQRTFVVYCHEAAMLRLQKRL--HVCTTY 129 Query: 124 PQATI---KLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 P I +L D + + +VD+ S E+L S+ Sbjct: 130 PNIEIILKELPPKDARIYEDLQMEKVDLVIDVSPSD----------SKVFQSELLHSEGL 179 Query: 181 CVWLRKDHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFE 239 K+HP + ++ ++ H+ + + + ++ ++ E+ R + Sbjct: 180 TCVASKNHPRIQQGKFDKSNYMTESHVLLNIRRHNLTFVEWLVSEVLPPRKVFSQHSSLL 239 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 L + + + + Y+ + QL P ++W + S Sbjct: 240 GMLPSVSNSQAIAVIPL-SVAEQYSDIFQLQTFPFPFE-------TKTFDSYMVWPSKMS 291 Query: 300 HNPKIVWLRETIKNLYAS 317 HN I WLR+ + + Sbjct: 292 HNSAITWLRQQMVHHLKE 309 >UniRef50_B0TPA4 Transcriptional regulator, LysR family n=2 Tax=Shewanella RepID=B0TPA4_SHEHH Length = 301 Score = 236 bits (603), Expect = 9e-61, Method: Composition-based stats. Identities = 59/322 (18%), Positives = 129/322 (40%), Gaps = 26/322 (8%) Query: 1 MKKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPL 60 M + D+NLL + + S T AA+ +++T +VS ++ + +A + LFV + Sbjct: 1 MTQQ-KQFDVNLLRVFLAVCRTGSYTLAAEELDLTQPSVSNAINRFKAVVGEELFVRAGR 59 Query: 61 GLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTP--RGLKFELAAESPLMMIMLNALSKQ 118 + PT + + + L + ++ P +F + A + ++ L + Sbjct: 60 NIKPTAMANYLFEQLNDSFCNIEQTINGLEGFDPNTSERQFVVLANDVIAHMLQRRL-DE 118 Query: 119 IYQRYPQATIKLR---NWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVL 175 + + P I R ++D + L+ +T + D+ + ++L Sbjct: 119 LVKDLP-IEIIFREPPDFDSEILELLTLEQADLVIDIGLPE----------DNRFERKLL 167 Query: 176 FSDVPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSL 235 + K+HP + ++ + + F H+ + + + A+D + +E+ R + S Sbjct: 168 IQEAAVCVASKEHPRIQESISWEQFFAERHVFVKLRRFNRTAVDILSEEVLPNRKVYSSK 227 Query: 236 PEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWH 295 + D + +A Y + ++ L L+ LP + L+W Sbjct: 228 SSMLSLFSAVSTSDAIGVA-PRNYSNDFEKVFNLQLLPLPF-------NTKPLDIELVWK 279 Query: 296 KRNSHNPKIVWLRETIKNLYAS 317 K+++ NP +WLRE I +L Sbjct: 280 KKHNRNPAHIWLREQITSLVDE 301 >UniRef50_Q1YUH5 Nodulation protein d1 n=1 Tax=gamma proteobacterium HTCC2207 RepID=Q1YUH5_9GAMM Length = 306 Score = 236 bits (602), Expect = 1e-60, Method: Composition-based stats. Identities = 54/297 (18%), Positives = 113/297 (38%), Gaps = 21/297 (7%) Query: 22 ERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSMEQNLAEWMQM 81 E+SV+++A+R++++ A+S +L +LR +F+DP+ + TP + + Q L + Sbjct: 20 EKSVSRSAERLHLSQPAMSAALRRLREYFNDPILKQHGKRMVSTPHALIIHQELKVVLAS 79 Query: 82 SNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQIYQRYPQATIKLRNWDYDSLD 139 L+ K P KF + A L ++ L + + P +++ + + Sbjct: 80 VEALISKTAFFDPATTSRKFTITASDYLAQVIFVPLIRHLRNVAPNIQLEIVPPADSTHE 139 Query: 140 AITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPALHQTWNLDT 199 +++G +D+ + + E+LF D + + +PA Q + Sbjct: 140 LLSQGSIDLVILPEQM----------ISDEFPSELLFEDRFVIVGCQSNPAFQQAMTEEA 189 Query: 200 FLRYPHISICWEQSDT-WALDNVLQELGRERTIAMSLPEFEQSLFMAAQPDNLLLATAPR 258 F H+ + D L+ + R + + F + M D L R Sbjct: 190 FYTSGHVVVKLGSRRPISVSDQQLESRKKSRDTDILVGSFLLAPEMVVGTDR-LTVMHER 248 Query: 259 YCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWLRETIKNLY 315 + + LP F ++ H S++P I ++ + IK + Sbjct: 249 LANIFATRVPIVTAPLPFSFPSIKEHVQV-------HSARSNDPGIQYILQKIKEIA 298 >UniRef50_Q4FSR3 Transcriptional regulator, LysR family n=3 Tax=Gammaproteobacteria RepID=Q4FSR3_PSYA2 Length = 304 Score = 236 bits (602), Expect = 1e-60, Method: Composition-based stats. Identities = 67/311 (21%), Positives = 129/311 (41%), Gaps = 25/311 (8%) Query: 7 TLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTP 66 LD+ L L L+ +++++ A+++ +T A+S+ L KLR DD LF+ + TP Sbjct: 16 RLDIKQLRVLHALLDLQNLSQVARKMGLTQQAISEQLRKLRDLLDDRLFIRQGNSMVATP 75 Query: 67 LMVSMEQNLAEWMQMSNLLLDKP-HHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQ 125 +SM+Q + + ++ +LL+ F ++A +L L + P Sbjct: 76 KALSMQQPIGDILKQLEVLLEPEVFTPQTYKGVFTISATDYATQALLPQLFNITRREAPD 135 Query: 126 ATIKLRNWDYDSLDAI-TRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 + +R++ D+++ + GE+D+ + E +P + Y LF + Sbjct: 136 LRLIVRDFASDNINQLIAAGELDLLITFPEF----------IPDNLSYVTLFEEQHLCVT 185 Query: 185 RKDHPALHQTWNLDTFLRYPHISICWEQSD-TWALDNVLQELGRERTIAMSLPEFEQSLF 243 + + L +P + + +++ + D E G +R I MS+P F Sbjct: 186 GYKNTFATDIFTLAQVAAHPQLVVSPSRANLRGSHDQWFAEKGLKRHIVMSVPSFSAVPD 245 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 + D ++A P N++ +L + ALP WH R S + Sbjct: 246 ILHTTD--MIAFYPSRLLPNNKVKELKVEALP----------PTFKVIAAWHPRTSDSGI 293 Query: 304 IVWLRETIKNL 314 WL E ++NL Sbjct: 294 HRWLIEQLQNL 304 >UniRef50_B8KHQ9 Transcriptional regulator, LysR family n=1 Tax=gamma proteobacterium NOR5-3 RepID=B8KHQ9_9GAMM Length = 299 Score = 235 bits (601), Expect = 1e-60, Method: Composition-based stats. Identities = 58/296 (19%), Positives = 124/296 (41%), Gaps = 22/296 (7%) Query: 22 ERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSMEQNLAEWMQM 81 E+SVT+AA R+NV+ A+S +L++LR FD+P+ + PT + M L + ++ Sbjct: 20 EQSVTRAADRVNVSQPAMSAALSRLREHFDEPILQQHGKSMVPTAAALRMRDPLKQLLRD 79 Query: 82 SNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQIYQRYPQATIKLRNWDYDSLD 139 ++L+ + H P +F++A L+ ++ L++++ + P T+ + Sbjct: 80 IDVLVTEGSHFDPSTSQRRFQIATSDYLLAVLFPQLNQRLDRLAPGITMDCIQPSELTRQ 139 Query: 140 AITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPALHQT-WNLD 198 + +GE+D+ E + E+LF + V +PA+ + Sbjct: 140 LLDQGELDLFIGPEEH----------VSPNHPTELLFEEEYVVVGCVKNPAVKPRKISEK 189 Query: 199 TFLRYPHISICWEQSDT-WALDNVLQELGRERTIAMSLPEFEQSLFMAAQPDNLLLATAP 257 F H+ + + + L++ +R I M + F + M + L Sbjct: 190 DFFEAGHVVVEIGRQARTSFAETHLRQSHAKRQIDMRVSSFLIAPEMVINTNK-LTVMHK 248 Query: 258 RYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWLRETIKN 313 R + Y + + + A+P F ++ + + + ++ + WL + IK Sbjct: 249 RLAKMYEKRLPIAIAAMPFEFPLMREM-------IQYQRSRQNDEGLRWLIDQIKQ 297 >UniRef50_Q15SK5 Transcriptional regulator, LysR family n=9 Tax=Gammaproteobacteria RepID=Q15SK5_PSEA6 Length = 306 Score = 235 bits (600), Expect = 2e-60, Method: Composition-based stats. Identities = 71/324 (21%), Positives = 134/324 (41%), Gaps = 28/324 (8%) Query: 1 MKKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPL 60 M K I LD+ L Q L++E++ +KAA ++ +T AVS+ L KLR FDD LF+ Sbjct: 1 MSK-IDRLDIKQLRIFQALIREKNASKAASQLGLTQQAVSEQLKKLRDVFDDRLFLRKTN 59 Query: 61 GLSPTPLMVSMEQNLAEWMQMSNLLLDK-PHHQTPRGLKFELAAESPLMMIMLNALSKQI 119 G PTPL + ++ + + LL + ++ ++A ++L +L ++ Sbjct: 60 GFIPTPLAEHLSVDIDKLLNGFQALLSPKVFNPKTISGEYVISATDYAQQVVLPSLIAKL 119 Query: 120 YQRYPQATIKLRNWDYDSLDAI-TRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSD 178 P I +R+++ D+L + G+V++ + + P S +++ LF + Sbjct: 120 RIESPNLKIIVRDFEIDTLHDLMLSGKVNLAIAFPDYIPDSYPIIN----------LFEE 169 Query: 179 VPCVWLRKDHPALHQTWNLDTFLRYPHISICW-EQSDTWALDNVLQELGRERTIAMSLPE 237 + Q+ +L YP I + ++D+ + G R + +S P Sbjct: 170 HHVCVASRHASIATQSPSLAEVASYPSIIASPSRPNFKGSIDDWFKGFGLTRNVVVSAPC 229 Query: 238 FEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKR 297 F D+ +A P L ++ L P PF WH R Sbjct: 230 FSIVPMYLNTTDS--IAFLPSRAIKGLDLVEIELEHCPEPF----------DVIAAWHPR 277 Query: 298 NSHNPKIVWLRETIKN--LYASMA 319 + + W+ + + + A++A Sbjct: 278 YNDDSLQKWIISKLTDEPVAANLA 301 >UniRef50_Q7D3Y4 Transcriptional regulator, LysR family n=3 Tax=Proteobacteria RepID=Q7D3Y4_AGRT5 Length = 317 Score = 234 bits (599), Expect = 2e-60, Method: Composition-based stats. Identities = 63/317 (19%), Positives = 122/317 (38%), Gaps = 21/317 (6%) Query: 2 KKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLG 61 ++ + DLNLL+ +M+E SVT+AA+R+ + A+S +++ LR F D LF+ Sbjct: 6 HFNLRSFDLNLLVAFDAMMEEMSVTRAARRLKIQQPAMSHNISTLRTLFQDELFIRVGQI 65 Query: 62 LSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQI 119 + PT +++ + + ++ + + P F L S + +++L L+ ++ Sbjct: 66 MKPTARALNLSGPVRQALRQAQAAVLMADAFEPATEQRTFRLGLSSEVELLLLPDLTARL 125 Query: 120 YQRYPQATIKLRNWDYDSLDA-ITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSD 178 P I R D ++A + G +D+ E L+ Sbjct: 126 RDIAPGIRILARGGDATEVNAMLDAGVIDMSVGCSYLPDSR----------HHSEPLYQS 175 Query: 179 VPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEF 238 + +LD ++ H I S + + L+ G E + + P+F Sbjct: 176 SVLCCFNPQLLKVSNPVSLDAYMAAQHAVISQTDSLHGCVKDALEHAGAELEVVAAAPDF 235 Query: 239 EQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRN 298 L A+ ++ + R + Y L L + +PL P ++W Sbjct: 236 MSVLAT-ARSSAVIATVSSRIARRYGPLLGLEVSPVPLALSFP-------PVAMVWPLHM 287 Query: 299 SHNPKIVWLRETIKNLY 315 + WLRE I+ Sbjct: 288 DSDLGCAWLREQIREAM 304 >UniRef50_Q391W5 Transcriptional regulator, LysR family n=3 Tax=Burkholderiales RepID=Q391W5_BURS3 Length = 315 Score = 234 bits (599), Expect = 2e-60, Method: Composition-based stats. Identities = 64/313 (20%), Positives = 124/313 (39%), Gaps = 21/313 (6%) Query: 7 TLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTP 66 +DLNL+ LQ ++ + +KAA + VT A+S++L +LR F D LFV S L PTP Sbjct: 14 RIDLNLVATLQAILDTGNASKAAIALGVTQPAISQNLRRLREHFGDELFVRSGNMLKPTP 73 Query: 67 LMVSMEQNLAEWMQMSNLLLDKPHHQTPRGL--KFELAAESPLMMIMLNALSKQIYQRYP 124 M++++ +A ++ ++L P P +F ++ +L +++ + P Sbjct: 74 RMLALQPVIARLLRDLDMLSRPPDGFDPATAEQEFIVSLSEVAEFAVLPSVAAEFALHAP 133 Query: 125 QATIK-LRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVW 183 + I+ +R L + +GEVD + L+ ++ + L Sbjct: 134 RCRIRGIRVHHSQLLSMLEQGEVD----------LAAGSLAGAAPSLRQQRLAEHRMVCM 183 Query: 184 LRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 + L ++ H+S+ T + LQ G R S+ + Sbjct: 184 VSAQGKWATAPLTLQDYIDGRHVSVRRIADTTDPISERLQATGIHRNAVASVSSDFVAAQ 243 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 + D + P + L + L +P + ++WH+R + Sbjct: 244 TVVKTDAICTVGEPA-GRQLTALFPVRLHPVPFEV-------GTLTSRMIWHERFQRDAS 295 Query: 304 IVWLRETIKNLYA 316 +WLR+ ++ Y Sbjct: 296 HIWLRKLVETAYR 308 >UniRef50_C9QF24 Transcriptional regulators LysR family n=1 Tax=Vibrio orientalis CIP 102891 RepID=C9QF24_VIBOR Length = 305 Score = 234 bits (598), Expect = 3e-60, Method: Composition-based stats. Identities = 69/321 (21%), Positives = 120/321 (37%), Gaps = 21/321 (6%) Query: 1 MKKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPL 60 M K +DLN L +L QER++ AA+R+ + A+S+ L+KLR +FDD LFV P Sbjct: 1 MGKQNGQMDLNALRIFFVLYQERNMRLAAERLFSSQPAMSQHLSKLRTYFDDELFVKVPT 60 Query: 61 GLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPR--GLKFELAAESPLMMIMLNALSKQ 118 GL PT ++ Q+ E + P LA L I+ + K+ Sbjct: 61 GLEPTSFADNLYQSSYELFTQLENSIATSQAFDPSNIEHTVVLAVSPLLAPIIGHQFFKR 120 Query: 119 IYQRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSD 178 I++ P+ I + W +LD + +V +G + + + S I + + D Sbjct: 121 IHELAPKLKILIHQWSKQTLDQLKSDQVQLGINYQ---------IVSEDKQIREKRVLQD 171 Query: 179 VPCVWLRKDHPALHQTWNLDTFLRYPH--ISICWEQSDTWALDNVLQELGRERTIAMSLP 236 +RKDHP + ++ +YP I S + V G + + Sbjct: 172 NFRCLVRKDHPHISTIITMEQAAQYPFTTIIASDWNSQLSYAEQVFAAKGFDVEVLYRSE 231 Query: 237 EFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHK 296 L + D + + + + F+ + H Sbjct: 232 FPASILDVVQNSDTIFPC------SQLYRFTNPEVFRS-IEFEGNPDVLKP-SICFYHHY 283 Query: 297 RNSHNPKIVWLRETIKNLYAS 317 +N +P WL E + + + Sbjct: 284 KNDKDPLTQWLIEVLTEVLDT 304 >UniRef50_B8CHD0 Regulatory protein, LysR:LysR, substrate-binding n=74 Tax=Gammaproteobacteria RepID=B8CHD0_SHEPW Length = 336 Score = 234 bits (598), Expect = 3e-60, Method: Composition-based stats. Identities = 70/316 (22%), Positives = 134/316 (42%), Gaps = 15/316 (4%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 ++ + + L+ L +++ +SVT +AKR+ ++PS+VSK+L++LR DD LF L Sbjct: 28 LSRISMKHLITLHVMLDTQSVTASAKRLCLSPSSVSKTLSQLRQSLDDDLFYRHGNKLVA 87 Query: 65 TPLMVSMEQNLAEWMQMSNLLL-DKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRY 123 TPL + N+ + + NLL+ + +F LA + L+ + Q+ Sbjct: 88 TPLARRLGPNVHQIIHDMNLLITQEEFSPAEYEGRFSLAMRESTFELFAAKLTANVLQQA 147 Query: 124 PQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVW 183 P + + D + I +G +D + + +E L D Sbjct: 148 PNIKLDVYAKDSIGFEGIVKGNLDFILLPHDRSQP-----PISQPDLVWETLIRDEMVCL 202 Query: 184 LRKDHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 + HP + ++D +L Y HI I + + L++ R +S+ +F + Sbjct: 203 MNACHPLAVKRMISIDDYLNYSHIGISDNDLNRPFFELKLEQQALNRATPLSVADFGSAA 262 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 M + LL + + + Q L + LP EV ++L+WHK++ ++P Sbjct: 263 LMCHHSE-LLFTCSRHWAENALQARGLVIKELPF-------DYGEVAYSLVWHKQSMNDP 314 Query: 303 KIVWLRETIKNLYASM 318 W +K + A + Sbjct: 315 AHRWFYGRLKKVTAEL 330 >UniRef50_UPI0001AEE3BF LysR family transcriptional regulator n=1 Tax=Streptomyces albus J1074 RepID=UPI0001AEE3BF Length = 331 Score = 234 bits (598), Expect = 3e-60, Method: Composition-based stats. Identities = 62/302 (20%), Positives = 120/302 (39%), Gaps = 24/302 (7%) Query: 21 QERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSMEQNLAEWMQ 80 +ER+VT+ A++++++ +AVS +L +LR F DPLFV +P G++PT S++ + + + Sbjct: 26 RERNVTRTAEQLHMSQAAVSAALGRLRKLFGDPLFVRAPGGMAPTARARSLQGPVRQGLD 85 Query: 81 MSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQIYQRYPQATIKLRNWDYDSL 138 + + P F L L ++L L + P +++ + ++ Sbjct: 86 SLKVAIAGEPEFDPARDAAVFRLGMSDDLEALLLPELIATVTAASPASSVFCLQANRMTV 145 Query: 139 -DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPALHQTWNL 197 D + G +G + ++ I LF Sbjct: 146 ADLLDSGGAQVGVAAS----------AAWGPDIRSRTLFESGYACLYDPVAVGSPAPLTR 195 Query: 198 DTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQPDNLLLATAP 257 +L PH+ I + + +D+VL R S F + + A + +AT P Sbjct: 196 AAYLALPHVMISADGT-RGVVDDVLDAENLTRRRVASTAHFAMAPLLLAGTAS--VATMP 252 Query: 258 RYCQY-YNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWLRETIKNLYA 316 R+ L + P+ + LWH+ +S +P++ WL ET+ L Sbjct: 253 RHAAEVLGARFGLQVCEPPITLP-------RFTVSALWHRSSSGDPRVRWLVETLGELAR 305 Query: 317 SM 318 ++ Sbjct: 306 TL 307 >UniRef50_Q7MCM8 Transcriptional regulator n=8 Tax=Vibrionaceae RepID=Q7MCM8_VIBVY Length = 298 Score = 234 bits (598), Expect = 4e-60, Method: Composition-based stats. Identities = 60/316 (18%), Positives = 123/316 (38%), Gaps = 28/316 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +D NLL + + RS+T AA + +T VS L +L+ LF G++PT Sbjct: 5 IDFNLLKVFVTVYRHRSITLAADAMGLTQPGVSGILKRLQEQLGVTLFTRDGRGIAPTHH 64 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNAL--SKQIYQRYP 124 + + + + + L+ KF + A PLM+ +L + + + Sbjct: 65 AHELARQVEPALSQIHNALESLEAFRTDTYRKFVIYAPEPLMLTLLPKIEGDSTLGK--- 121 Query: 125 QATIKLRNWDYDSLDA---ITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPC 181 I+L++ YD + + + + D+ + + E L +D C Sbjct: 122 -IDIELQHMPYDVDEQFTRLNQQQADLAIDF----------VHHSAPSFYSEKLMNDEIC 170 Query: 182 VWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQS 241 + R+ HP + + D + + HI++ + + + D +E R +A Sbjct: 171 LIARRGHPRIQGAISRDEYYQEKHITLKMRRENVYLADYFTEEFLNVRRVAAECDSMVAQ 230 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 + + A D + + T + + + L ++ P+ + + + LL H R ++ Sbjct: 231 MSLVATSDCIAMVT-RSLAEQFAETLGLQVLHSPM-------TAIPITYRLLIHNREINS 282 Query: 302 PKIVWLRETIKNLYAS 317 P WLRE + + Sbjct: 283 PANQWLRERLSRYFTQ 298 >UniRef50_B9QVA6 LysR substrate binding domain protein n=1 Tax=Labrenzia alexandrii DFL-11 RepID=B9QVA6_9RHOB Length = 299 Score = 234 bits (597), Expect = 4e-60, Method: Composition-based stats. Identities = 75/302 (24%), Positives = 121/302 (40%), Gaps = 25/302 (8%) Query: 21 QERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSMEQNLAEWMQ 80 +V+ AAK+I +T A+S L +LR F+DPL V S L T +++ +L +Q Sbjct: 19 DHENVSLAAKQIGITQPAMSAQLKRLRDLFNDPLLVPSGRRLVATTRARALQNDLRAHLQ 78 Query: 81 MSNLLLDKPHHQTPR--GLKFELAAESPLMMIMLNALSKQIYQRYPQATIKLRNWDYDSL 138 N L+ P F L + ++ + K + P A +D L Sbjct: 79 GLNALVRDHTVFDPASSETTFRLIGTDYVHAVLAAPVQKMLAAEAPGARAAFLAFDPKIL 138 Query: 139 -DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPALHQTWNL 197 ++ D+ + S P + + ++ V + K HP + Q L Sbjct: 139 WSSLEAETADLALATGMSLPEA-----------KRQSALTEDFQVIMSKTHPLVGQPMTL 187 Query: 198 DTFLRYPHISICWEQSDT-WALDNVLQELGRERTIAMSLPEFEQSLFMAAQPDNLLLATA 256 + F +PHI + E A D VL+E G +R +A+SLP F + + + D L Sbjct: 188 EGFCAFPHILVSPEGGGFIGATDRVLKETGHKRRVAISLPSFLLAPALVSSSDAL--CMM 245 Query: 257 PRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWLRETIKNLYA 316 P +LHQ + P PF LLWH R ++P W R ++ L Sbjct: 246 PS---RLAKLHQGNMACTPSPFPSP-----AFDVDLLWHPRRQNDPAHKWFRAQVRRLAQ 297 Query: 317 SM 318 + Sbjct: 298 GL 299 >UniRef50_A8H6N4 Transcriptional regulator, LysR family n=3 Tax=Shewanella RepID=A8H6N4_SHEPA Length = 305 Score = 233 bits (596), Expect = 6e-60, Method: Composition-based stats. Identities = 51/320 (15%), Positives = 116/320 (36%), Gaps = 22/320 (6%) Query: 1 MKKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPL 60 M + + DLNL + + S ++AA+ +++T S+VS ++ +L+ + LF+ Sbjct: 1 MSQQ-KSFDLNLFRIFTAVYRTSSFSRAAEELDLTQSSVSNAITRLKLAVGEELFIRVGR 59 Query: 61 GLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTP--RGLKFELAAESPLMMIMLNALSKQ 118 G+ PT +++ Q LA + + F + A ++++ + + Sbjct: 60 GVKPTASAMNLYQQLASPVSEIEQVASSFELFDAKRSERTFYVYASESAILLLQGIVEQF 119 Query: 119 IYQRYPQATIKLRNWDYDSLD-AITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFS 177 + + + + L + +VD+ S + + Sbjct: 120 LEELSINLVFREPPLIEEELQMDLQLEKVDLALDIWLPESSS----------FKSQKVMQ 169 Query: 178 DVPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPE 237 D RK HP + + + HI + + D + +++ R + Sbjct: 170 DKLVCVARKGHPRISGAITQEQYFNEKHIIFKMRRDNLSVADLLTKQVLPARKMHSEQSS 229 Query: 238 FEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKR 297 + +A++ D L + + Y Y QL L + LP + + + ++W + Sbjct: 230 ILSMMALASKSDALAIV-SKSYTDEYAQLFGLQVFELPFAAE-------PIEYYMVWSHK 281 Query: 298 NSHNPKIVWLRETIKNLYAS 317 N +WLR+ + Sbjct: 282 LQQNRANIWLRDLLNQAITR 301 >UniRef50_A6AT33 Transcriptional regulator n=2 Tax=Vibrio harveyi RepID=A6AT33_VIBHA Length = 313 Score = 233 bits (596), Expect = 6e-60, Method: Composition-based stats. Identities = 75/322 (23%), Positives = 135/322 (41%), Gaps = 22/322 (6%) Query: 1 MKKSI-TTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSP 59 M K + + LDLNLL +L QER++ +AA R+ V+ AVSK+L +LR FDD LFV + Sbjct: 1 MAKDLFSNLDLNLLRTFIILHQERNMRRAADRMFVSQPAVSKALQRLRDHFDDELFVKTH 60 Query: 60 LGLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSK 117 GL T + ++LA + ++ L+ P ++A ++ + + + Sbjct: 61 HGLRATEYANDLAESLAPLLDEISITLNGSKDFNPLEMNGTVKIALAPFILSSYASEIFQ 120 Query: 118 QIYQRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFS 177 I Q P I L NW ++D I + EV +G + ++ P + + + Sbjct: 121 AIRQAAPNVQIHLLNWSRSTMDEIIKDEVLLGVNYE---------INHSPKELLTKEIVK 171 Query: 178 DVPCVWLRKDHPALHQTWNLDTFLRYPHISICW--EQSDTWALDNVLQELGRERTIAMSL 235 D C ++RKDHP + ++ S+ + +++ G E IA Sbjct: 172 DAFCAYVRKDHPLQGDRLRVSDCQHLEFATVIAADWNSNISFSEKIMKIKGVEPKIAFRS 231 Query: 236 PEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWH 295 + + A D + A+ ++L +L + E + +E +H Sbjct: 232 ELPSAIIDVVANSDMVFPASKTVNVDKLHKLRRLDI--------ELEGMVIEPSLLAYYH 283 Query: 296 KRNSHNPKIVWLRETIKNLYAS 317 +N N + WLR + + Sbjct: 284 HKNRRNDMVHWLRNIVTEIITG 305 >UniRef50_B6AU51 Transcriptional regulator, LysR family, putative n=1 Tax=Rhodobacterales bacterium HTCC2083 RepID=B6AU51_9RHOB Length = 299 Score = 233 bits (595), Expect = 6e-60, Method: Composition-based stats. Identities = 72/320 (22%), Positives = 120/320 (37%), Gaps = 22/320 (6%) Query: 1 MKKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPL 60 M +++ +D L LQL+ + RS T AA+ +NV S+VS ++ +LR F DPLFV Sbjct: 1 MNETLRGIDFGALETLQLVYRLRSFTAAAETLNVKQSSVSYTIDRLRKSFSDPLFVRQGN 60 Query: 61 GLSPTPLMVSMEQNLAEWMQMSNLLLDKP-HHQTPRGLKFELAAESPLMMIMLNALSKQI 119 +SPT +S+ + ++A ++L L + + Sbjct: 61 QISPTDKCISLVGYAERILAEIERASQPDIFDPASLRATVSISATYLSRAVLLPKLVRDL 120 Query: 120 YQRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 P TI+L D+ + G+ D+ S + I+ + LF D Sbjct: 121 RNEAPNITIELITGFTDANQQLLSGKADMALSPVAINES----------GINGKFLFDDP 170 Query: 180 PCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFE 239 + + L+ F H+ I + Q L++LG + +S E Sbjct: 171 YVCVMDPANKLAQADMTLEQFASAAHMFIHYGQKWQPPFRKKLKDLGYIMSPMISTANPE 230 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 M D L++ R Q + QL P P D Q W R + Sbjct: 231 DVGLMLPGTD-LIVTLPSRIAQQFAPQFQLR----PCPVDAVAQ------LNFYWPARLN 279 Query: 300 HNPKIVWLRETIKNLYASMA 319 ++P +W+R+ I NL Sbjct: 280 NSPLHIWMRDKIFNLAQDPG 299 >UniRef50_Q87I72 Putative transcriptional regulator, LysR family n=7 Tax=Vibrio parahaemolyticus RepID=Q87I72_VIBPA Length = 332 Score = 233 bits (595), Expect = 7e-60, Method: Composition-based stats. Identities = 71/321 (22%), Positives = 135/321 (42%), Gaps = 17/321 (5%) Query: 2 KKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLG 61 KK + LDLNLL +++ +E+ AAKR+N+T AVS+++A+LR F+DPLFV + G Sbjct: 22 KKPLHNLDLNLLKIFRVVSEEKKTVAAAKRLNITQPAVSRAMARLREHFNDPLFVRTRYG 81 Query: 62 LSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTP--RGLKFELAAESPLMMIMLNALSKQI 119 L PT + +L + M + L+ + +P ++A + L ++ Sbjct: 82 LKPTDKGQLLSDSLPKIMDDLSNLILELDEFSPESSSANIKIAINGFFGVSFPAKLHLKL 141 Query: 120 YQRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 P TI+ +W +++ + GE+D+G + L+++P + + L +D Sbjct: 142 LDIAPNITIETESWSSNTISKLINGELDLGINYP---------LNNVPKELQTKHLATDE 192 Query: 180 PCVWLRKDHPALHQTWNLDTFLRYPHIS--ICWEQSDTWALDNVLQELGRERTIAMSLPE 237 + R HP Q + + YP ++ + + ++ + E A Sbjct: 193 FQILARDAHPLSDQAIDCNDLSLYPIVTAIVPDWNENRTLIECWAERENIETETAFRSSS 252 Query: 238 FEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKR 297 L + ++ D L P + P ++ K L H R Sbjct: 253 ILSLLEVISETDALF----PTSAFLSRKHLSGLKSLSLSPQLKASFKGESQDIYLYMHYR 308 Query: 298 NSHNPKIVWLRETIKNLYASM 318 + ++P WL I++ +S+ Sbjct: 309 HRNSPIYKWLIPIIESTLSSI 329 >UniRef50_P46924 Probable HTH-type transcriptional regulator leuO n=122 Tax=Gammaproteobacteria RepID=LEUO_SALTY Length = 314 Score = 233 bits (595), Expect = 7e-60, Method: Composition-based stats. Identities = 56/318 (17%), Positives = 118/318 (37%), Gaps = 21/318 (6%) Query: 2 KKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLG 61 K + +DLNLL +MQE+++T+AA + ++ AVS ++A+L+ F+D LFV G Sbjct: 16 KPQLRMVDLNLLTVFDAVMQEQNITRAAHTLGMSQPAVSNAVARLKVMFNDELFVRYGRG 75 Query: 62 LSPTPLMVSMEQNLAEWMQMSNLLL-DKPHHQTPRGLKFELAAESPLMMIMLNALSKQIY 120 + PT + ++ + +Q+ L T F L SPL I+ + + ++ Sbjct: 76 IQPTARAFQLFGSVRQALQLVQNELPGSGFEPTSSERVFNLCVCSPLDNILTSQIYNRVE 135 Query: 121 QRYPQATIKL-RNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 + P + + + ++ + E + S E LF D Sbjct: 136 KIAPNIHVVFKASLNQNTEHQLRYQETEFVISYEEFRR----------PEFTSVPLFKDE 185 Query: 180 PCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFE 239 + + HP + H + ++ ++ ++A Sbjct: 186 MVLVASRKHPRISGPLLEGDVYNEQHAVVSLDR-YASFSQPWYDTPDKQSSVAYQGMALI 244 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 L + +Q + +A + + + L ++ LPL + L WH+ Sbjct: 245 SVLNVVSQTHLVAIA-PRWLAEEFAESLDLQILPLPLKLNSRTC-------YLSWHEAAG 296 Query: 300 HNPKIVWLRETIKNLYAS 317 + W+ + + ++ Sbjct: 297 RDKGHQWMEDLLVSVCKR 314 >UniRef50_D0DE94 Transcriptional regulator, LysR family n=1 Tax=Citreicella sp. SE45 RepID=D0DE94_9RHOB Length = 314 Score = 233 bits (595), Expect = 7e-60, Method: Composition-based stats. Identities = 67/300 (22%), Positives = 109/300 (36%), Gaps = 17/300 (5%) Query: 22 ERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSMEQNLAEWMQM 81 E SV AA+R+ ++ SA+S++LA+LR DPL V + G+ TP ++ + + Sbjct: 18 EGSVVDAARRLGLSASAMSRTLARLRDATGDPLLVRAGRGMVLTPHAEALRERVPHLAAE 77 Query: 82 SNLLLDKPH---HQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQATIKLRNWDYDSL 138 +L F + A + L + + +R P I D Sbjct: 78 VEAVLRPAETTLDPESLQRDFVIRANDGFIAAYGATLLRLVRERAPAVRILFVQKDASPA 137 Query: 139 DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPALHQTWNLD 198 A+ G D+ +L + + L +D +R HP Q Sbjct: 138 RALRDGLCDLELG----------ILRDTAPELKVQRLLTDHFVGVVRAGHPLAGQDITAR 187 Query: 199 TFLRYPHIS--ICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQPDNLLLATA 256 F I + T +D L +G +R +P F +L MA Q D L+A Sbjct: 188 DFAESDSIVSILHQPADFTHVVDRALAGIGLKRRRTFQVPSFLVALSMAQQSD--LVAVV 245 Query: 257 PRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWLRETIKNLYA 316 P+ + L E E+ +L+WH R +P WLRE ++ Sbjct: 246 PQSYARMERRRMAALGLPGPEIFELPFDTGEIVISLIWHPRMDSDPANRWLRELVRECTR 305 >UniRef50_B7VQ63 Transcriptional regulators, LysR family n=3 Tax=Vibrionales RepID=B7VQ63_VIBSL Length = 304 Score = 233 bits (595), Expect = 8e-60, Method: Composition-based stats. Identities = 51/318 (16%), Positives = 115/318 (36%), Gaps = 24/318 (7%) Query: 4 SITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLS 63 + LDLNLL + + +S+T A++ + +T VS +L +L+A LF+ G++ Sbjct: 3 DMEKLDLNLLSVFLEVYRLKSITLASESLGMTQPGVSGALKRLQAQLGTDLFIREGRGIT 62 Query: 64 PTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGLK-FELAAESPLMMIMLNALSKQIYQR 122 PT + + + + + + F + + + L ++ Sbjct: 63 PTNAAMQLALRVEPALDGITSAVSTLKQFDNQQHHVFRILVNEIGLTKLQP-LVEKDDTL 121 Query: 123 YPQATIKL---RNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 +I+ + + D L +++ + D+ + + D Sbjct: 122 G-NISIEFNMVPSNEEDLLQSLSMQQADLAIDIHYPQV----------NGYMNQQVIEDE 170 Query: 180 PCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFE 239 + +K HP + + + HI+ +S + D + ++R ++ Sbjct: 171 LVLIAKKGHPRIDGSVTEAQYYHEKHITFRMRRSHLYTADYFTKNPIQQRKVSSECDSLM 230 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 + + D + +T+ + + + QL ++ P L + ++WHKR Sbjct: 231 TMCVLVSGSDCVG-STSRGFANQFAERFQLQVLEQPFEV-------LPMKQYMIWHKRTD 282 Query: 300 HNPKIVWLRETIKNLYAS 317 N WLR I+ S Sbjct: 283 LNTAHQWLRTKIQQHMTS 300 >UniRef50_B7X552 Transcriptional regulator, LysR family n=1 Tax=Comamonas testosteroni KF-1 RepID=B7X552_COMTE Length = 319 Score = 233 bits (595), Expect = 8e-60, Method: Composition-based stats. Identities = 61/323 (18%), Positives = 128/323 (39%), Gaps = 25/323 (7%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 S ++++LL CL+ L+ E+SVT+AA R+ ++ +S +L +LR DPL V G+ Sbjct: 1 MSRERIEISLLFCLEALLAEKSVTRAANRLGMSQPGMSNALNRLRVLTRDPLLVRVGKGM 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTP--RGLKFELAAESPLMMIMLNALSKQIY 120 TP V + + + + + + P P +A + + + L+ + Sbjct: 61 ELTPRAVELAGLVKSGLSVLDAIFSDPRPFEPARAEGVLTVAMSDAMALELGPRLTARFD 120 Query: 121 QRYPQATIKLRNWD-YDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 + PQ ++++ D + + G++D+G +S+P + L S Sbjct: 121 REAPQLCMQIQRLDQSNLFGLLAEGQLDLGIGYA----------TSVPKQMYASDLLSQS 170 Query: 180 PCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALD----NVLQELGRERTIAMSL 235 + HP + +L+ F+R H+ + + L+ R++ + Sbjct: 171 LSAIRSRQHPRIAAQLSLEGFMRERHVLTAAPTRSISWAESSVADALKARNLVRSVGARV 230 Query: 236 PEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWH 295 + + A ++L + + + L ALP+P T++WH Sbjct: 231 NSILLAPPIVASS-SMLCTMPTWLARRSAESLPITLHALPVPIAT-------FKTTMVWH 282 Query: 296 KRNSHNPKIVWLRETIKNLYASM 318 +R W R ++ + +M Sbjct: 283 ERTHRQELHHWARGVVREVVKAM 305 >UniRef50_B5HRF1 Transcriptional regulator n=1 Tax=Streptomyces sviceus ATCC 29083 RepID=B5HRF1_9ACTO Length = 310 Score = 233 bits (595), Expect = 8e-60, Method: Composition-based stats. Identities = 64/305 (20%), Positives = 106/305 (34%), Gaps = 28/305 (9%) Query: 20 MQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSMEQNLAEWM 79 M+E++VT A R+ + S +S SLA+LR F+D L V TPL + + + Sbjct: 1 MEEKNVTHAGVRLCTSQSGMSGSLARLRRHFNDELLVRVGREYELTPLAERLLPLVQASL 60 Query: 80 QMSNLLLDKPHHQTP--RGLKFELAAESPLMMIMLNALSKQIYQRYPQATIKLRNWDYDS 137 + L H P +F + +M + + L + I Q P I Sbjct: 61 HKAEEALSLTRHFDPEHSRQRFSVVMSDYVMTVFVEPLLRVIAQEAPGVRIDFHPIVDGQ 120 Query: 138 LD---AITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPAL-HQ 193 L+ + D+ E + D + D+P L Sbjct: 121 LETETHLRCH--DLMIVPLGYQIPGV-----------SEAVMHDRFVCLVDPDNPRLVDG 167 Query: 194 TWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQPDNLLL 253 L PH + + L+ LG + +S P F F+ + D L+ Sbjct: 168 RLGLRDLAEMPHAACSI-GRGNTPVGRQLETLGITPKVQVSTPGFSVLPFLVSGTD-LVT 225 Query: 254 ATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWLRETIKN 313 R + Y + V P P + + + WH +P WLRET++ Sbjct: 226 LVPERLARRYEGFARCVAVPTPFP-------DVPLVEAMHWHNNRHADPAHRWLRETVRK 278 Query: 314 LYASM 318 + AS+ Sbjct: 279 VGASL 283 >UniRef50_Q9ZHH8 LysR-type transcriptional regulator PhnS n=1 Tax=Burkholderia sp. RP007 RepID=Q9ZHH8_9BURK Length = 380 Score = 232 bits (594), Expect = 9e-60, Method: Composition-based stats. Identities = 60/318 (18%), Positives = 122/318 (38%), Gaps = 11/318 (3%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 +++ ++++NLL L L++ +V+ AA R+++T S VS SL +LR F+D L V + Sbjct: 7 RNLRSVNMNLLPVLGELLRCPNVSHAANRLHLTQSTVSGSLKQLRLLFEDDLLVQRGREM 66 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLL-DKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQ 121 T + + ++ ++ L + F +A + ++ + L + Sbjct: 67 VLTEKAKELRPAVERLLEQASRLFCAETFDPATAANCFRIATADYVSALVTSRLGPVLQA 126 Query: 122 RYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPC 181 P +I L + + G VD+ +++ +EV D Sbjct: 127 NAPGVSITLTPTPGTTAKDLRLGVVDLIICPNRRENWEACGIAAHDPEFCHEVFIRDRLV 186 Query: 182 VWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQS 241 + + L +L PH C L ++G + I +P F Sbjct: 187 AIQSANRSLAERPLALADYLARPHAMYCRTDGQPTIEQETLAQMGLVQRIQFLVPYFTLL 246 Query: 242 LFMAAQPDNLLLATAP-RYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 + D+ L+A P +Y +L L + P+PF + H+ + Sbjct: 247 PQLVV--DSHLVALIPLSLANHYARLFPLDVFEPPVPFPSLDLVMIGAC-----HRADRA 299 Query: 301 NPKIVWLRETIKNLYASM 318 + + WLR+ +++ +S Sbjct: 300 D--LYWLRKIVRDSASSF 315 >UniRef50_Q391B6 Transcriptional regulator, LysR family n=1 Tax=Burkholderia sp. 383 RepID=Q391B6_BURS3 Length = 300 Score = 232 bits (594), Expect = 1e-59, Method: Composition-based stats. Identities = 69/299 (23%), Positives = 127/299 (42%), Gaps = 20/299 (6%) Query: 20 MQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSMEQNLAEWM 79 + E SV+ AA+ ++++PSA+S++LA+++ D + V + G+ T +++ L + Sbjct: 16 IDEESVSGAARSLDLSPSAMSRTLARVQDAIGDKVLVRAGKGMVATETARRLKEPLDRIL 75 Query: 80 QMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQATIKLRNWDYDSLD 139 Q LLL H F ++A + + Q + +P A ++ ++ Sbjct: 76 QDVELLLGAQHRSIDAQRVFNISANDGFIDSFAVPIIAQAHDAWPHARLRFLPKHEKTVA 135 Query: 140 AITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPALHQTWNLDT 199 + GEVDI ++ I LF D LRK H + LD Sbjct: 136 RLRSGEVDIEIG----------VVGETGPEIMIRKLFDDRMVGVLRKGHRLARRRMTLDA 185 Query: 200 FLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQPDNLLLATAPRY 259 +L PHIS+ + +D+ L E GRER + +P F+ + +A + D +A P Sbjct: 186 YLSVPHISVSRKGRFHGPIDDALSEQGRERNVIAVVPNFKSGIELAQRSDW--IAHVP-- 241 Query: 260 CQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWLRETIKNLYASM 318 + + + +V LP + +++WH R + LR+ I N+ + Sbjct: 242 -EKHTAQARHDVVTFDLPVATP-----ALAISIMWHPRFERDAVHAGLRDLIVNVCRQV 294 >UniRef50_A0AZD8 Transcriptional regulator, LysR family n=17 Tax=Proteobacteria RepID=A0AZD8_BURCH Length = 394 Score = 232 bits (593), Expect = 1e-59, Method: Composition-based stats. Identities = 73/319 (22%), Positives = 128/319 (40%), Gaps = 24/319 (7%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 + LD L+ L +L+ ER+V++AA R+N++ A S +L +LR DPL V S G+ P Sbjct: 21 LDVLDARLMRILLVLLTERTVSRAAVRLNMSQPATSAALKRLRTLLGDPLLVRSRYGMVP 80 Query: 65 TPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQIYQR 122 T + + L +++ + + + R + + L ++ + L +R Sbjct: 81 TEFGARLIEPLRNALRVIDFIRIQQPTFDARTSVRTYRIGCPDYLNVLFVPKLVALFRER 140 Query: 123 YPQATIKLRNWDY--DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 P A + D A+ GE+D+ R + LF D Sbjct: 141 APHAQLVFHPLGDGFDDERALADGELDVVIDNRPVRRSR----------FRQDDLFDDRV 190 Query: 181 CVWLRKDHPAL-HQTWNLDTFLRYPHISICWEQ-SDTWALDNVLQELGRERTIAMSLPEF 238 +R HP F P + + A+D L+ +G +R I ++LP F Sbjct: 191 VCLMRATHPLARRDAMTAARFAAAPQLCPTPSWLEASGAIDRQLERVGLQRRIVVTLPHF 250 Query: 239 EQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRN 298 E + + D +L T R ++Y +L L VALP+ ++ + + W++ Sbjct: 251 ELAAHALVRTDLILTTTY-RLARHYAKLLPLAAVALPVE-------PPDIAYRITWNESG 302 Query: 299 SHNPKIVWLRETIKNLYAS 317 S WLR I + Sbjct: 303 SCAEGGRWLRGLIAEATRA 321 >UniRef50_C5B758 Transcriptional regulator, LysR family, putative n=2 Tax=Edwardsiella RepID=C5B758_EDWI9 Length = 333 Score = 232 bits (592), Expect = 1e-59, Method: Composition-based stats. Identities = 72/320 (22%), Positives = 131/320 (40%), Gaps = 27/320 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +D LL + L + S+T+AA R+ ++ +A S++L+KLR F D LFV G+ TP Sbjct: 9 VDSELLALFRALAETGSLTQAAGRVGLSQAAASRALSKLRTVFQDLLFVKGGYGMQATPR 68 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQIYQRYPQ 125 + + +Q + L P+ P+ L A + ++ + + K ++Q+ P Sbjct: 69 ARELMPRVTAALQALDH-LTMPYEFDPQTLRRTLYLGAVDNGVWMIFSRVVKSLFQQAPN 127 Query: 126 ATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 A I++ D ++ G +D+ L +P LF +R Sbjct: 128 ARIEILPIGDDLFSSLKFGRMDLAIYP----------LIDIPADFHEANLFKTTFSCLVR 177 Query: 186 KDHPAL-----HQTWNLDTFLRYPHISICWEQSDTW-ALDNVLQELGRERTIAMSLPEFE 239 + HP + L Y + + + N + G++ IAMS+P F Sbjct: 178 QGHPLARQMQCGEAPTLAQINAYRRLQVSLHDGQPGAVVGNAVHRQGKDYDIAMSVPYFL 237 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 + + AQ D +L + ++++Q+ L ++ P + L+WH R Sbjct: 238 AAPMILAQTDFVL-TLPIQTARHFSQMANLAILPYP-------DGETTFYTRLIWHHRVH 289 Query: 300 HNPKIVWLRETIKNLYASMA 319 H+P I WLR + A Sbjct: 290 HDPVIQWLRALFLRFASEEA 309 >UniRef50_A8H9L3 Transcriptional regulator, LysR family n=5 Tax=Shewanella RepID=A8H9L3_SHEPA Length = 310 Score = 232 bits (592), Expect = 1e-59, Method: Composition-based stats. Identities = 76/312 (24%), Positives = 124/312 (39%), Gaps = 21/312 (6%) Query: 9 DLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLM 68 DL+LL+ LQ+L++ERSVT+AAKR++++ SA S+ LA+LR DDPLF L PT Sbjct: 10 DLSLLIALQILVEERSVTQAAKRLHLSQSATSRILARLRDMLDDPLFSRVGQQLVPTSFA 69 Query: 69 VSMEQNLAEWMQMSNLLLDK-PHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQAT 127 + Q L + LL +F +A M ++ + IY++ PQ Sbjct: 70 LECYQQLRQPTGQLIELLTPKAFVPQECQQQFSIAVTDYAMQALIPFILPIIYKKAPQIR 129 Query: 128 IKLRNWDYDSLD-AITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRK 186 +++ L ++ D+ + L L Sbjct: 130 LEIVPVQQKELQAQLSVKGADMAVCRAIGQTG----------NLQQTFLGKVGVSCLLSP 179 Query: 187 DHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAA 246 +HP + LD +L YPH +I LD+ + RT + P + +L + Sbjct: 180 NHPLANSDITLDDYLHYPHATIAISDGVKALLDDAISLY-PARTELLRTPHLDTALAL-Q 237 Query: 247 QPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVW 306 + L++ + Q H+L + LP + + L WH R + W Sbjct: 238 SVNPLIITLPEGMAEIAAQRHKLKVKPLPFKL-------QSLDYKLFWHSRCDQDKAQKW 290 Query: 307 LRETIKNLYASM 318 LRE I + Sbjct: 291 LREEIATAIQEL 302 >UniRef50_Q4KCL9 Transcriptional regulator, LysR family n=15 Tax=Proteobacteria RepID=Q4KCL9_PSEF5 Length = 311 Score = 231 bits (591), Expect = 2e-59, Method: Composition-based stats. Identities = 70/318 (22%), Positives = 120/318 (37%), Gaps = 23/318 (7%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 +I ++DLNLL + L E S ++AA R+ VT SA+S +L +LR + DPLFV + GL Sbjct: 4 MNIASVDLNLLKAFEALHDESSASRAALRLGVTQSAMSAALRRLRELYGDPLFVRTGRGL 63 Query: 63 SPTPLMVSMEQNLAEWMQMSNL--LLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIY 120 +PT ++ ++E + + P +G L + + + + Sbjct: 64 APTLKANQLKPVVSEALNKCRQSLAMVAPDTADYQGRSVTLGLSDDFEIAYGRQMIEAVA 123 Query: 121 QRYPQATIKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 +R P+ + R + +A+ + VD+ S R + +VL Sbjct: 124 RRAPKLRLIFRQSHSQIVAEALLQRSVDLAISAGGFAERL----------LSRQVLGEGH 173 Query: 180 PCVWLRKDHPALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEF 238 A Q +L+ F+ H+ + + D L LG R + S F Sbjct: 174 YLCLADPASLAPGQQQISLEEFVAREHLLVSSQGFI-GITDEGLANLGLSRQVCASTTHF 232 Query: 239 EQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRN 298 F+ + + +L L L+ PL P L W Sbjct: 233 AALPFLLKGSQAVA-TIPAHAARRIAELTGLQLLPCPLALP-------RYPIELGWRTSP 284 Query: 299 SHNPKIVWLRETIKNLYA 316 +P +V +RE I +A Sbjct: 285 QTDPLLVKVREAIVESFA 302 >UniRef50_C6C4P6 Transcriptional regulator, LysR family n=4 Tax=Proteobacteria RepID=C6C4P6_DICDC Length = 325 Score = 231 bits (591), Expect = 2e-59, Method: Composition-based stats. Identities = 66/320 (20%), Positives = 120/320 (37%), Gaps = 25/320 (7%) Query: 2 KKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLG 61 K +I T+DLNL + L +E +AA R+ VT SA+S +L ++R + D LF + G Sbjct: 3 KINIETMDLNLFKVFEALYEEGGAGRAALRLGVTQSAISAALGRMRNIYGDRLFERTGRG 62 Query: 62 LSPTPLMVSMEQNLAEWMQMSNLLLDKPHH--QTPRGLKFELAAESPLMMIMLNALSKQI 119 L PT + +++ + L + +G + + + L+ Q+ Sbjct: 63 LRPTRRADELHPIISDALNKCRQSLSMANSVGDEFQGRTVTMGWSDDYEIALARTLTNQV 122 Query: 120 YQRYPQATIKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSD 178 YP + R + D + VD+ S + +VL Sbjct: 123 AAEYPGIRLIFRQTHSRVAADMLMERAVDLAISTEGFSSSI----------LGRQVLGGG 172 Query: 179 VPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEF 238 L + P L+ ++R HI + +D L LG +R I +S F Sbjct: 173 SYACLLD-NRPDAPDALTLEEYIRRRHILVSSGGFI-GIVDEALAALGLQRRIEVSTTHF 230 Query: 239 EQSLFMAAQPDNLLLATAPRYCQY-YNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKR 297 ++ ++L T P + Y + L ++ PL L W Sbjct: 231 AAVPYLLKGSESL--VTLPAHAAYPIAAIADLRVLPCPLVLP-------GYAIELGWRLD 281 Query: 298 NSHNPKIVWLRETIKNLYAS 317 +P +V +R+ ++ ++A Sbjct: 282 ALRDPAVVAVRQAVQCVFAE 301 >UniRef50_B7VP76 Transcriptional regulator (Lys R family) n=2 Tax=Vibrio RepID=B7VP76_VIBSL Length = 304 Score = 231 bits (591), Expect = 2e-59, Method: Composition-based stats. Identities = 63/313 (20%), Positives = 116/313 (37%), Gaps = 22/313 (7%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 + D +L+ ++M+E S++ AKR VT A+SK+L +L+ +DDPLFV + G P Sbjct: 1 MKNTDFSLIPYFVVMMEELSISNTAKRFGVTQPAISKALNRLKETYDDPLFVKTKEGYRP 60 Query: 65 TPLMVSMEQNLAEWMQMSNLLLDKPHHQTPR--GLKFELAAESPLMMIMLNALSKQIYQR 122 + + + + P F +A S ++ +S +Y Sbjct: 61 SSFCYDIYPQIKQAYDAFESTFPSKRKFDPTKIERSFNVACISGATYSLMKRVSDILYAE 120 Query: 123 YPQATIKLRN-WDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPC 181 P + + + D + + + D+ + + E + L ++ Sbjct: 121 TPDIGLHIDPYYTADIILDLRQHRYDLCIVHTPINDPAMECIQ----------LSNEPMV 170 Query: 182 VWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQS 241 V K+HP L L+ +L H+ + L + + R +A P + Sbjct: 171 VAYDKNHPRLGNEITLEEYLEEKHVLHSMWDTKESPL-TKTSKYAKSRKVARKAPGPFEM 229 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 L M D L ++ + Y L L LP D + L+WHK + + Sbjct: 230 LDMVRGTDWLCIS-QKSILERYGLLDDFKLSPLPFESDLGTE-------YLVWHKSRNAD 281 Query: 302 PKIVWLRETIKNL 314 W R+ I + Sbjct: 282 MAHSWFRKKIVDA 294 >UniRef50_B1KHA3 Transcriptional regulator, LysR family n=1 Tax=Shewanella woodyi ATCC 51908 RepID=B1KHA3_SHEWM Length = 305 Score = 231 bits (591), Expect = 2e-59, Method: Composition-based stats. Identities = 70/314 (22%), Positives = 123/314 (39%), Gaps = 24/314 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 LD LL + SV+ AA ++++ S VS L +LR +PLFV S G+ PT Sbjct: 9 LDGRLLRLFLTVFDTGSVSGAADKLDLNQSTVSNGLDRLRRIIGEPLFVRSGRGIIPTQE 68 Query: 68 MVSMEQNLAEWMQMSNLLLDKPH-HQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + E + ++ F +AA I+L L ++ P A Sbjct: 69 ASRLAPLARELLAKFEQFVEAQEYRAEDESRPFVIAANDYERDILLPQLLVKLRLLAPNA 128 Query: 127 TIKLRNWD--YDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 +K+ L+ + +GE+D+ S + + + + LFSD V+ Sbjct: 129 PLKVLTAGAKETVLEQLRQGEIDLVLSPS---------IEANVDDLKQQWLFSDCDAVFY 179 Query: 185 RKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 + + +L ++ PH + + S +D VL L ER I + + F M Sbjct: 180 DPE--VIKGPIDLAQYVALPHARVVFNYSGRSEIDEVLTGLKLEREIKLEVANFSALSSM 237 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 + L+ T P + L ++ P+ ++ WH+ +H+P+ Sbjct: 238 MRGSE--LVTTLPSRVGI-SLLDKMAQQTPPISL-------NDINIYQFWHQAYTHSPRH 287 Query: 305 VWLRETIKNLYASM 318 WLRE +K L + Sbjct: 288 RWLRELVKALAEEL 301 >UniRef50_Q4KGL9 Transcriptional regulator, LysR family n=15 Tax=Pseudomonas RepID=Q4KGL9_PSEF5 Length = 348 Score = 230 bits (588), Expect = 5e-59, Method: Composition-based stats. Identities = 68/322 (21%), Positives = 114/322 (35%), Gaps = 19/322 (5%) Query: 2 KKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLG 61 + LD+ L+ + ++ SVT ++ + V+ S VS L KLR F+D LF+N+ G Sbjct: 40 SNVLRKLDMQDLMVFIAVYEQSSVTGVSETLCVSQSTVSYCLKKLRNGFEDELFINTRTG 99 Query: 62 LSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGL--KFELAAESPLMMIMLNALSKQI 119 + PT SM ++ ++ NL P F L A +++L L K Sbjct: 100 MRPTYKATSMYNHVLRILESINLCHSGVPAFDPTRQAVTFNLCAPEYFELLILPRLLKGF 159 Query: 120 YQRYPQATIKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSD 178 T+ ++ + D + + G VD+ R ++L D Sbjct: 160 DYADLPVTVNVQKLESDIPAEDLRDGSVDLVICFGPDFHRRH-------ADFKSQMLLED 212 Query: 179 VPCVWLRKDH-PALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPE 237 K P ++L +F+ H+ SD+ +D L +R I Sbjct: 213 DLVCVFDKRATPPREPRFSLQSFVERRHVFPTPWTSDSNMVDGWLARQAHKRQIVARSNS 272 Query: 238 FEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKR 297 + +L M D LL T PR Q + E+ + W + Sbjct: 273 YSAALKMITGTDFLL--TLPRRIQALLANEAV------FNHCEAPSGLPGFSLDMQWSQH 324 Query: 298 NSHNPKIVWLRETIKNLYASMA 319 + W RE I + A Sbjct: 325 TDQDSAQTWFREQIVKVCAEQG 346 >UniRef50_B8H6G8 Transcriptional regulator, LysR family n=1 Tax=Arthrobacter chlorophenolicus A6 RepID=B8H6G8_ARTCA Length = 337 Score = 229 bits (586), Expect = 7e-59, Method: Composition-based stats. Identities = 57/312 (18%), Positives = 109/312 (34%), Gaps = 25/312 (8%) Query: 4 SITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLS 63 ++ T DLNLL+ L L+ ER+VT+A RI ++ A+S SL +LR FDD L Sbjct: 3 NLLTADLNLLVALDALLMERNVTRAGARIGISQPAMSSSLQRLRRQFDDQLLTRIGSSYE 62 Query: 64 PTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPR--GLKFELAAESPLMMIMLNALSKQIYQ 121 TPL +++++++ ++M D P F + + + L + + Sbjct: 63 LTPLAQVLQEDVSQILRMVERTFDAQAVFDPAVSTRSFRIVTSDYCLTALSGTLMNMLQK 122 Query: 122 RYPQATIKLRNWDYDSLDAITR--GEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 P + ++++ I D+ + + LF+D Sbjct: 123 EAPGVQVHFDAVTPEAVERIKETLQTADLMLIPKGHFS-----------GFPHTELFTDN 171 Query: 180 PCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFE 239 P + ++ + + ++ D + +L + + F Sbjct: 172 WVCVTGDTSP--EKNLTVEQMRDARWARLFGTEVNSTLADRRVYDLQLGERTDIIVDSFL 229 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 F A L L R Q + + ++ LP+ + WH S Sbjct: 230 MLPFAVAGTSRLALV-QERLAQMLASVAGVKIMQLPISLPTLVE-------CAWWHPSKS 281 Query: 300 HNPKIVWLRETI 311 +P W R + Sbjct: 282 PDPGHQWFRRLV 293 >UniRef50_B9JQA8 Transcriptional regulator n=1 Tax=Agrobacterium radiobacter K84 RepID=B9JQA8_AGRRK Length = 338 Score = 229 bits (586), Expect = 7e-59, Method: Composition-based stats. Identities = 51/297 (17%), Positives = 107/297 (36%), Gaps = 21/297 (7%) Query: 22 ERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSMEQNLAEWMQM 81 ERSV+ AA+RI ++ SA S +L +LR +F D L + + T VS+ + + ++ Sbjct: 20 ERSVSLAAERICLSQSATSSALGRLREYFGDDLLIVKGRQMILTTRAVSLVEPVRAVLEQ 79 Query: 82 SNLLLD--KPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQATIKLRNWDYDSLD 139 + + P + A + ++L + Q+ P +R D ++ Sbjct: 80 IRMTISVTPPFDPAVSDRAISIMASDYITEVLLASAINQMAVEAPNMRFDIRPLDCHLVE 139 Query: 140 AITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPALHQTWNLDT 199 + RG D+ + ++ ++LF D V + A+ D Sbjct: 140 TLERGLTDLLVTIDY----------AISPDHPSDILFEDDYVVVGWSGNRAMKGPMTKDL 189 Query: 200 FLRYPHISICWEQSDTWALDNVLQELG-RERTIAMSLPEFEQSLFMAAQPDNLLLATAPR 258 + H++ + Q A ++ +R + + P F + + R Sbjct: 190 YFALGHVTARFGQGRVSAFEDWFVRRNKLQRRVEVVTPTFLSLPGLVVGSSRIA-TMHRR 248 Query: 259 YCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWLRETIKNLY 315 L + +P ++ + WH N+++ I W+ +K + Sbjct: 249 LATRMADHMPLTIREVPFDIPRIRE-------AVQWHVSNNNDKAIRWVVARLKAMA 298 >UniRef50_A5L763 Transcriptional regulator n=1 Tax=Vibrionales bacterium SWAT-3 RepID=A5L763_9GAMM Length = 301 Score = 229 bits (586), Expect = 8e-59, Method: Composition-based stats. Identities = 58/311 (18%), Positives = 123/311 (39%), Gaps = 21/311 (6%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 + +LNL+ + +E ++T AA+R+N++ ++S L +LR + D LFV L P Sbjct: 1 MKRFNLNLIYYFIAIYEEGNLTYAAERLNISQPSLSAHLKQLRDEYRDLLFVRKSYTLEP 60 Query: 65 TPLMVSMEQNLAEWMQMSNLLLDKPHHQTP--RGLKFELAAESPLMMIMLNALSKQIYQR 122 TP+ + + ++ + L + H P F +AA S ++L + +I + Sbjct: 61 TPVANDLYPIFKQAHKLVSHSLPETHDFEPKECSYTFRIAAMSISSSVILPQILDRIQEE 120 Query: 123 YPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCV 182 P+ I++ N D I ++D+ L++ + + ++ D C+ Sbjct: 121 APECVIEVVNIKEDMATDIREKKIDLVVD-----------LTNAHPTLLSQEIWGDELCM 169 Query: 183 WLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 ++H +++ L+ +L H+ + + L + +R +A L Sbjct: 170 VCSQNHSQINEQVTLEQYLSAKHVMLTHDNYRVNQLTEFHSPIFADRKVARKLNSIADFS 229 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 D + Y ++ L+ LP + + ++ WH + + Sbjct: 230 DTIYNSDWIA-TFPKGVANAYFDKDKIKLLELPFEYIKP-------SLSVYWHSNRNDDI 281 Query: 303 KIVWLRETIKN 313 WLRE + Sbjct: 282 VNQWLRELFTS 292 >UniRef50_C3KQ67 Transcriptional regulator, LysR family n=1 Tax=Rhizobium sp. NGR234 RepID=C3KQ67_RHISN Length = 307 Score = 229 bits (586), Expect = 8e-59, Method: Composition-based stats. Identities = 58/317 (18%), Positives = 108/317 (34%), Gaps = 22/317 (6%) Query: 2 KKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLG 61 K+ + +DL L L L+ S + AA R++V S VS ++ +LRA F DPLF+ Sbjct: 4 KQQLDGIDLGSLKVLVLVCDLGSFSAAANRLDVNQSTVSYTVERLRAVFRDPLFLRQGNR 63 Query: 62 LSPTPLMVSMEQNLAEWMQMSNL-LLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIY 120 + PT + + + ++ + +A I+L ++ Sbjct: 64 MLPTQKCSELTEAARRMLDQLAAFTAEQAFDPSSATGSVTVACNFHERQIVLPEFCARLR 123 Query: 121 QRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 + P + + + + E DI + A LF+D Sbjct: 124 RAAPNVRLVVLESAVHGKRQLKQNECDIVLGP----------IEIFGEAYFRTHLFTDRY 173 Query: 181 CVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQ 240 + + + +L + HI + L+ G A+ LP + Sbjct: 174 VCVMDPGNVLVQAPLSLQAYRSAQHIQVNHNGEWQGLYIAALEAKGVPFEPAVVLPSHDN 233 Query: 241 SLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 + A D L+AT P + +L +V PL + + W R + Sbjct: 234 LDRIIAGSD--LVATIPGRLAH-GLKEKLSVVEFPLDVP--------IHIDMYWTARTAQ 282 Query: 301 NPKIVWLRETIKNLYAS 317 + W R+ + + S Sbjct: 283 SGLHRWARQLLAEVARS 299 >UniRef50_Q5LVV7 Transcriptional regulator, LysR family n=2 Tax=Ruegeria RepID=Q5LVV7_SILPO Length = 303 Score = 229 bits (585), Expect = 1e-58, Method: Composition-based stats. Identities = 68/318 (21%), Positives = 120/318 (37%), Gaps = 23/318 (7%) Query: 2 KKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLG 61 K T LD +L C ++++E SV++AA R+ VT SAVS +LAKLRA DPLFV S G Sbjct: 3 KFDFTDLDGKVLRCFLVILEESSVSRAADRLGVTQSAVSHTLAKLRAVLGDPLFVRSGQG 62 Query: 62 LSPTPLMVSMEQNLAEWMQMSNLLLDK-PHHQTPRGLKFELAAESPLMMIMLNALSKQIY 120 L+PT +S+ + + + L D P + F++AA ++ L + Sbjct: 63 LTPTERALSLREPVQRVLDGIKSLTDARPFDPLGEEMHFDIAANDLQRELIFPELLCRAR 122 Query: 121 QRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 + ++ + + + I LF+ Sbjct: 123 AEGVRLSLGFVPSGVPDPALLRSDRCQLVLTPLPPDG----------PDIYQRRLFTSPL 172 Query: 181 CVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQ 240 ++ H + ++ H+ + + + + + + R + LP F Sbjct: 173 QIYYDASH--RSPPDSWQSYCAAEHVEVRFIDGRSANVVMRGVDQSQIRPPTVVLPHFGA 230 Query: 241 SLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 D + TA L L LP D V ++WH+R++ Sbjct: 231 IPAFVKGSDLISTDTA---LMKLGPLATLDCAPLPFACD-------PVSIYMVWHERSTA 280 Query: 301 NPKIVWLRETIKNLYASM 318 +P WLR ++ + A + Sbjct: 281 DPAHRWLRARVEAIAARL 298 >UniRef50_Q9ZN79 HTH-type transcriptional regulator linR n=6 Tax=Bacteria RepID=LINR_PSEPA Length = 303 Score = 229 bits (584), Expect = 1e-58, Method: Composition-based stats. Identities = 67/320 (20%), Positives = 124/320 (38%), Gaps = 24/320 (7%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 +I LD L+ L L++ SV+ AA+ +++ S LA+LR DPL V + G+ Sbjct: 1 MNIDDLDFRHLVLLDALLKRHSVSAAARELDLPQPTASHGLARLRKALGDPLLVRARDGM 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLD--KPHHQTPRGLKFELAAESPLMMIMLNALSKQIY 120 PTP ++ + + +++ L + + +F +A +++L AL Sbjct: 61 EPTPRAEAIAGVVQQLLELRRDLAEGGQTFSPDRLKREFIIAGSDIAHLVVLTALHSAAR 120 Query: 121 QRYPQATIKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 P + + D + A+ G VDI SL I + L+ + Sbjct: 121 FEAPHTSYRALTLSGDEMVSALETGHVDIAVGAYP----------SLVAGIKTQRLYQEE 170 Query: 180 PCVWLRKDHPALHQTWNLDTFLRYPHISICWEQ--SDTWALDNVLQELGRERTIAMSLPE 237 + ++ HP + D F HI + + A++ L + I + Sbjct: 171 YLCFGKEGHPFIKSGET-DDFTAADHIVVSTKGMAHAHRAVERALLDKIHPDRIRIVASS 229 Query: 238 FEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKR 297 F +L + D +L A A R +++ L V P+ + WH R Sbjct: 230 FLVALAACFESDLILTAPA-RVTGRLAEVYGLRAVRPPILMEA-------FEVRQYWHAR 281 Query: 298 NSHNPKIVWLRETIKNLYAS 317 N +P WLR+ + + ++ Sbjct: 282 NQDDPPHRWLRQLLHKVLSA 301 >UniRef50_C8WFJ3 Transcriptional regulator, LysR family n=3 Tax=Zymomonas mobilis RepID=C8WFJ3_ZYMMN Length = 316 Score = 228 bits (583), Expect = 2e-58, Method: Composition-based stats. Identities = 67/317 (21%), Positives = 120/317 (37%), Gaps = 24/317 (7%) Query: 4 SITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLS 63 IT D NL++ L ERSVTKAA R++++ SAVS SL++LR D LF+ + G+ Sbjct: 9 DITRFDFNLVITFLALWHERSVTKAAARLSLSQSAVSASLSRLRQAAGDLLFIRTRQGME 68 Query: 64 PTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQIYQ 121 PT + M ++L+E + + P F + + + + +SKQI Sbjct: 69 PTQRAIDMVESLSEGATLIYNAFISENEFDPARCNRHFSIGMSDDFQLALGSEISKQIQA 128 Query: 122 RYPQATIKLRNWDYDSLDA-ITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 P+A++ R + + + ++D+ R + +V+ Sbjct: 129 IAPEASVVYRQTNRYTAQQMLENNDIDLAIVTASLPRR----------GLWQQVIGEGGY 178 Query: 181 CVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQ 240 + L+ +L PHI + + + +D +L +GR R I +L F Sbjct: 179 ACLCDAQSCGFSENPTLEAYLSLPHILVSYSGRE-GLVDEILSIMGRSRKIQTALTHFAA 237 Query: 241 SLFMAAQPDNLLLATAPRYCQY-YNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 + +AT P + L + PL + Sbjct: 238 LPPFLLGSKS--IATIPSHAAISLAGYTGLTIFEAPLELTAYPIIATMRL-------SSQ 288 Query: 300 HNPKIVWLRETIKNLYA 316 + ++WL + IK Sbjct: 289 KDTALLWLFQIIKQAIR 305 >UniRef50_A6D744 Putative transcriptional regulator n=1 Tax=Vibrio shilonii AK1 RepID=A6D744_9VIBR Length = 311 Score = 228 bits (583), Expect = 2e-58, Method: Composition-based stats. Identities = 76/315 (24%), Positives = 135/315 (42%), Gaps = 21/315 (6%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 LDLNLL ++L+QER+ K A+R+ VT A+S++L KLR DD LFV GL P Sbjct: 8 FQKLDLNLLKTFRVLLQERNARKTAERLFVTQPAISQALQKLRFHLDDELFVKVQGGLEP 67 Query: 65 TPLMVSMEQNLAEWMQMSNLLLDKPHHQTPR--GLKFELAAESPLMMIMLNALSKQIYQR 122 TP + +E+ +A ++ L++ +P ++A ++ + +L ++ ++ Sbjct: 68 TPFALQVEEKIAPYLDGLEASLEQLSDFSPSELEGTIKIALAPIVLSCLAGSLFTELRKQ 127 Query: 123 YPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCV 182 P+ ++L +W + + + GEV IG L S+ I L V Sbjct: 128 APKLNLELVSWTQQTPEQLRSGEVFIGIHYD---------LDSISKEIARTKLADLEGQV 178 Query: 183 WLRKDHPALHQTWNLDTFLRYPHISICW--EQSDTWALDNVLQELGRERTIAMSLPEFEQ 240 ++R+DHP + ++ S+ + +L++LG E +A Sbjct: 179 YVRQDHPLKGEVITAHDAAQFEIASLISPGWNDNFSFAAQILEQLGYEPKVAFRSEVLMA 238 Query: 241 SLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 + + + D LL + H L AL D K + H +N H Sbjct: 239 IIDVVSATDILLP-----HSNLLPNRHSSGLRALRFELDGRTYTKSLYTYL---HNKNRH 290 Query: 301 NPKIVWLRETIKNLY 315 +PK WL + ++ + Sbjct: 291 SPKAQWLEKILREKF 305 >UniRef50_A4BGW0 Probable transcription regulator protein n=1 Tax=Reinekea blandensis MED297 RepID=A4BGW0_9GAMM Length = 304 Score = 228 bits (583), Expect = 2e-58, Method: Composition-based stats. Identities = 69/318 (21%), Positives = 121/318 (38%), Gaps = 23/318 (7%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 K++ LDLNLL L+ + Q R++T+AA+ +N+TPSAVS +L +LR DDPLF + Sbjct: 5 KTLNQLDLNLLKVLEAMYQHRNLTRAAEALNITPSAVSHALKRLRDSLDDPLFERRGQQM 64 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGLK--FELAAESPLMMIMLNALSKQIY 120 +PTP+ + + + + L +P ++A L ++ L Sbjct: 65 TPTPVCRRLVPEVLQTLNTLRRSLQSFGEFSPETSTQALQIAIHDALEPLLFPLLLTVFR 124 Query: 121 QRYPQATIKLRNWDYDSLD-AITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 P ++ D L+ + GEVD E L Sbjct: 125 NTAPLISLSSVKLDRSQLEHQLEIGEVDFAIDIARPLSAPIEHLPLSQSGF--------- 175 Query: 180 PCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFE 239 L + +T+ + HI + + D +LG R + + + Sbjct: 176 --CVLGNESIIPTDELTTETYGQAEHIVVSNRPTGKVIEDLAFAQLGFNRKVVVRCQNYP 233 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 ++ + LL T P + L VALP +++ + L WH + Sbjct: 234 TAIRIVKT--MPLLLTLPESIAIAWETSGLQRVALPFEVPQTETR-------LYWHALSV 284 Query: 300 HNPKIVWLRETIKNLYAS 317 +P ++W R+ I + Sbjct: 285 DDPLLLWARQRIMTAVNT 302 >UniRef50_Q2P1D7 Transcriptional regulator n=5 Tax=Xanthomonas RepID=Q2P1D7_XANOM Length = 326 Score = 228 bits (582), Expect = 2e-58, Method: Composition-based stats. Identities = 75/318 (23%), Positives = 136/318 (42%), Gaps = 24/318 (7%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVN--SPL 60 +I DL LL+ L L++ ++VT AA+R++++ A+S LA+LR F DPL + + Sbjct: 1 MNIRPSDLPLLVSLDALLELKNVTHAAQRLHMSQPALSSQLARLRVLFKDPLLMPSDTGR 60 Query: 61 GLSPTPLMVSMEQNLAEWMQMSNLLL-DKPHHQTPRGLKFELAAESPLMMIMLNALSKQI 119 G+ TP + L E + +LL D F +AA + + + L+ I Sbjct: 61 GMVATPRADQLASPLREAIGKLSLLGKDSAFDPATSSASFRIAAAADAIGTLGAGLAGLI 120 Query: 120 YQR-YPQATIKLRNWDYDS-LDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFS 177 + + ++ + D+ LDA GE+D+ ++ P + L Sbjct: 121 QAQGNRKMRLEFVHVSSDTRLDAFENGELDLLIDHAQAVPDALRLRRLR----------D 170 Query: 178 DVPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPE 237 + + R+ HP + ++ R H+ + Q+ A+D L+ LG R IA+++ + Sbjct: 171 ERYVLVQRRGHPRGTAALSAASYSRLAHVQVAHAQACNLAIDAQLRHLGHTRQIAVTVSQ 230 Query: 238 FEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKR 297 + + D ++AT P L LP P ++ + WH+R Sbjct: 231 CATARDIVLGTD--MVATMPATLAAERGHAPLDCFELPFPLP-------DMALAMAWHRR 281 Query: 298 NSHNPKIVWLRETIKNLY 315 N + WLRE + +L Sbjct: 282 NDAHAAHRWLRERVLDLL 299 >UniRef50_Q47ZN8 Transcriptional regulator, LysR family n=1 Tax=Colwellia psychrerythraea 34H RepID=Q47ZN8_COLP3 Length = 312 Score = 228 bits (582), Expect = 3e-58, Method: Composition-based stats. Identities = 64/323 (19%), Positives = 124/323 (38%), Gaps = 23/323 (7%) Query: 1 MKKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPL 60 M + + +DLNLL LM E++++ AA+ + +T AVS++L +LR+ ++DPLF Sbjct: 1 MARYLRNVDLNLLSIFTALMHEKNISHAAENLGMTQPAVSQALKRLRSLYNDPLFERKSG 60 Query: 61 GLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGL--KFELAAESPLMMIMLNALSKQ 118 + PT + + + + + L P F + L LS++ Sbjct: 61 KMMPTLKADEIYPIINKILADVSSTLPDTGDFLPETANLNFHINILGVGNNDFLTKLSQR 120 Query: 119 IYQRYPQATIKLRN-WDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFS 177 + P ++ + D+ ++ E D+ + L+ + ++ LF+ Sbjct: 121 LAHVAPNISLTVSTEMLVDAEKSLRDKEYDL----------HLDYLTIDEIGCHHQELFN 170 Query: 178 DVPCVWLRKDHP--ALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSL 235 D + RK HP L +L H + + + + L LQ+ R I + Sbjct: 171 DQLFIIARKGHPNLNNKTNLLLSEYLAEKHAVLAPRKGNVYPLSLALQDFSYNREIKYTS 230 Query: 236 PEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWH 295 E L + + D + + Q + ++ P K ++ + WH Sbjct: 231 TSIENILEIVSATDLICI-MPGTVLQSMHNVNDYIWFNPPF-------KTKQMIAYMNWH 282 Query: 296 KRNSHNPKIVWLRETIKNLYASM 318 H WLR I ++ +M Sbjct: 283 WSMEHVKSHRWLRTIIIDICKNM 305 >UniRef50_A0Z258 Transcriptional regulator, LysR family protein n=1 Tax=marine gamma proteobacterium HTCC2080 RepID=A0Z258_9GAMM Length = 313 Score = 227 bits (581), Expect = 3e-58, Method: Composition-based stats. Identities = 73/319 (22%), Positives = 132/319 (41%), Gaps = 20/319 (6%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 K ++ +DLNLL+ LQ+L++E SV+ AA+R+++T A+SK+L +LR F+DPLFV S G+ Sbjct: 4 KKLSKVDLNLLVSLQILLEECSVSSAARRMSITQPAMSKTLGRLRDTFNDPLFVRSKRGI 63 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPR--GLKFELAAESPLMMIMLNALSKQIY 120 PTP S+ L + L + +P + +A + + +L L+ ++ Sbjct: 64 QPTPRAQSIAAELPAL-LAAAEALLEAGDFSPSAFKGEITIAISEYVGLSLLPPLTARLQ 122 Query: 121 QRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 + P +++ LD + G +D + + Y+ L Sbjct: 123 KIAPGLSLRTITRVEGQLDKLAAGGLDFAV---------QLTRTDYSEEFRYQSLGGSPL 173 Query: 181 CVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAM-SLPEFE 239 V++R HP + ++ YP IS+ L L + ++AM Sbjct: 174 AVFVRDGHPLASKPLTRESLTEYPAISLYVSDRGETELPLALDPRLQAGSVAMLETSHLL 233 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 +L + + D L+ P Y + + + V + L+ H+R Sbjct: 234 TALEILRETDFTLVC--PAYLARNQGATRDVV-----ALALPPEDAQYVDYALVAHRRTQ 286 Query: 300 HNPKIVWLRETIKNLYASM 318 +P WL I + M Sbjct: 287 ASPAHQWLWNEIIDTVRGM 305 >UniRef50_Q0B1J5 Transcriptional regulator, LysR family n=1 Tax=Burkholderia ambifaria AMMD RepID=Q0B1J5_BURCM Length = 321 Score = 227 bits (581), Expect = 3e-58, Method: Composition-based stats. Identities = 71/307 (23%), Positives = 134/307 (43%), Gaps = 23/307 (7%) Query: 13 LLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSME 72 L L+ + R++T+ A R+ ++ SAVS + + R LFV + G++PT +++ Sbjct: 31 LRAFCLVCECRNLTQVALRLEMSQSAVSLMVQRWRLALGTTLFVRTRYGVTPTDAAMALR 90 Query: 73 QNLAEWMQMSNLLLDKPHHQTP--RGLKFELAAESPLMMIMLNALSKQIYQRYPQATIKL 130 L ++ +L L P F L ++ L L+ + Q P +++ Sbjct: 91 DKLHPLLEGMSLALANSRGFDPKTSERVFRLHMSDIGQLVFLPGLNSFLAQHAPGIRLQI 150 Query: 131 RNWDYDSLDA-ITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHP 189 RN +++L+A ++ GEVD+ L + + VL + +R+ HP Sbjct: 151 RNLAWEALEAGLSAGEVDVAIGS----------LPMIKGRVSSRVLRKERYVTAMRRRHP 200 Query: 190 ALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQPD 249 + +L F H++I S +++V++ G +R I++++P F + + D Sbjct: 201 LAKRALDLAAFAAAEHMAIDATSSGHSLVESVMRSKGMQRRISLTMPHFLAAERILGSSD 260 Query: 250 NLLLATAPRYCQY-YNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWLR 308 LL T P + L +V PL L WH+R+ + +I WLR Sbjct: 261 YLL--TVPEVAVMSFRDPSALHIVPTPLELPT-------FDIRLHWHERSRQDQEIKWLR 311 Query: 309 ETIKNLY 315 +I +L+ Sbjct: 312 ASITSLF 318 >UniRef50_B8H6I0 Transcriptional regulator, LysR family n=1 Tax=Arthrobacter chlorophenolicus A6 RepID=B8H6I0_ARTCA Length = 325 Score = 227 bits (581), Expect = 3e-58, Method: Composition-based stats. Identities = 53/308 (17%), Positives = 112/308 (36%), Gaps = 25/308 (8%) Query: 17 QLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSMEQNLA 76 Q+L++ +++++AA+R+ ++ A S ++A+LR FDD L V + TP S+ + Sbjct: 13 QVLLELKNISRAAERLQLSQPATSAAMARLRRHFDDELLVRNGRTYDLTPFAQSLVPLVD 72 Query: 77 EWMQMSNLLLDKPHHQTP--RGLKFELAAESPLMMIMLNALSKQIYQRYPQATIKLRNWD 134 E + P +F +AA +++ L + P ++ Sbjct: 73 EALLHIQRATRVRSGFDPGTSEREFIIAASDYAAALIVGPLRGILRDEAPGVSVDFMPTS 132 Query: 135 YDSLD-AITR-GEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPALH 192 + + ++D+ H + LF D V L Sbjct: 133 KSGIQGQLADYSKIDLLVGPTGYHMQGA-----------SRQLFRDSFVVVADAASSLLQ 181 Query: 193 QT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQPDNL 251 + L+ + PH + + + D + + LG +R +A + F + D Sbjct: 182 RPRLTLEDLVTVPHAVGYFGEGISTPADKLFESLGLQRRVAAVVAGFLSLPLLVEGTD-- 239 Query: 252 LLATAPR-YCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWLRET 310 L+A PR + + + + + + + + WH + +P VWLR Sbjct: 240 LVALVPRMLAARAARGANIAV------LEFADDTEASLVEAMYWHPSQTEDPASVWLRSV 293 Query: 311 IKNLYASM 318 ++ + Sbjct: 294 VQRSCGRL 301 >UniRef50_A6VZT8 Transcriptional regulator, LysR family n=1 Tax=Marinomonas sp. MWYL1 RepID=A6VZT8_MARMS Length = 303 Score = 227 bits (581), Expect = 3e-58, Method: Composition-based stats. Identities = 57/318 (17%), Positives = 124/318 (38%), Gaps = 19/318 (5%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 LDLNLL+ L L++ ++V+ AA+ ++++ SA+S SL++LR +F+D L + + + Sbjct: 1 MHFRKLDLNLLVALDALIRNQNVSMAAEELHLSQSAMSSSLSRLRRYFNDDLLIQTGRKM 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNL--LLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIY 120 +PL +E+ + + + + +L T +F + ++ ++ + + Sbjct: 61 VLSPLAEQLEEPIRDILVKIDASIMLKPGFDPTSSDREFRICVSDYMLHTLIPYVIEMTQ 120 Query: 121 QRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 ++ + D + + RGE D+ E L +D Sbjct: 121 EQGCTVKLNFLPQVSDPKNELDRGEADLLILPEIFC----------SDYHLSEPLITDEF 170 Query: 181 CVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQ 240 + + +D F+ HI + S+ + + G R I + F Sbjct: 171 VCVVWDQSELSKKGMTMDAFMSAGHICMQPPNSNPSFETHAYKIKGVSRRIDVRTYSFSC 230 Query: 241 SLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 + + L+AT + + + L + P ++ ++ WHK Sbjct: 231 IPSLVVGTN--LIATLQKRLVDKSISQGMALKSFATPVKLPLLRE-----SMQWHKYQHA 283 Query: 301 NPKIVWLRETIKNLYASM 318 + I+WLR+ + A + Sbjct: 284 DLGIIWLRQLMLAAVAKL 301 >UniRef50_Q1YVH2 Transcriptional regulator, LysR family protein n=1 Tax=gamma proteobacterium HTCC2207 RepID=Q1YVH2_9GAMM Length = 324 Score = 227 bits (581), Expect = 3e-58, Method: Composition-based stats. Identities = 75/326 (23%), Positives = 138/326 (42%), Gaps = 27/326 (8%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 + ++ LDLNLL+ LQ L++E+SVT+AA+R+ +T A+S+ L +LR DDPLF + L Sbjct: 4 QKLSRLDLNLLVALQALLEEKSVTRAAQRLFITQPAMSRVLQRLRQQLDDPLFTRTGNIL 63 Query: 63 SPTPLMVSMEQNLAEWMQMS-NLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQ 121 PTP ++ L + +++ D + +A + + + + L+ + + Sbjct: 64 IPTPKAQELQLRLPMLLDGILDMVTDGEFDPATYVGEITIAIPEFIAISLASQLTALLNK 123 Query: 122 RYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPC 181 P + + + ++ G +D ++ + + L P Sbjct: 124 YAPGVILSISSETDSVAGELSDGVLDFAI----------DIKREITAEVTARHLSIFSPS 173 Query: 182 VWLRKDHPALHQ-TWNLDTFLRYPHIS--------ICWEQSDTWALDNVLQELGRERTIA 232 +W+R+ HP + LD L+YP++ + D L++ GR R+ A Sbjct: 174 IWMREGHPLAKKNRVTLDEILQYPYVQYYLLIAKRVSARTDAR--FDRALRKQGRSRSKA 231 Query: 233 MSLPEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTL 292 M + ++ D L+++ A +L+++ P + VP L Sbjct: 232 MVTNQLMTAIETICASDCLMVS-AKFGSGMERELYRIVTKTYPDDLP----HEGTVPLVL 286 Query: 293 LWHKRNSHNPKIVWLRETIKNLYASM 318 L HKR +P WL E I L M Sbjct: 287 LQHKRTLGSPIHQWLSEKIVELARDM 312 >UniRef50_A6EZR5 Transcriptional regulator, LysR family protein n=1 Tax=Marinobacter algicola DG893 RepID=A6EZR5_9ALTE Length = 306 Score = 227 bits (580), Expect = 3e-58, Method: Composition-based stats. Identities = 62/319 (19%), Positives = 131/319 (41%), Gaps = 25/319 (7%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 ++ +DL L LQ L++E ++++ A ++ VT AVS L KLRA F+D LF+ S G+ Sbjct: 2 NALNRVDLKQLRTLQCLLREGNLSRVADQLGVTQQAVSDQLKKLRATFNDRLFIRSGNGV 61 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDK-PHHQTPRGLKFELAAESPLMMIMLNALSKQIYQ 121 +PT ++ L + LL++ + +++ +L L +++ + Sbjct: 62 TPTAYARTLGPKLDLILNAVGELLEQDEFNPATTTRTITISSTDLEQKTILPFLMQRLRR 121 Query: 122 RYPQATIKLRNWD-YDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 P + ++ + + + + G VD+ + + P + L+S+ Sbjct: 122 EAPGLRLAVKKLELDEMANDLLDGSVDLVLTNPKFA----------PPSYPSLTLYSERY 171 Query: 181 CVWLRKDHPALHQTWNLDTFLRYPHISICW-EQSDTWALDNVLQELGRERTIAMSLPEFE 239 K + A+ T ++ P + + T A+ ++ G R +S+P F Sbjct: 172 VCVAGKANEAVRSTMSVAEIASMPQVVVSPSRGDFTGAVHRWFEDQGHPRQAMLSVPTFT 231 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 + ++ D L+ P + L + L + +WH+R+S Sbjct: 232 AAKATISETD--LVGFIPSRLLPDDSLQPIEL----------NAEIPGFDVIAVWHQRSS 279 Query: 300 HNPKIVWLRETIKNLYASM 318 +P +W+R+ + + M Sbjct: 280 QDPLNIWIRDLLLQVSNRM 298 >UniRef50_B2VHH8 Transcriptional regulator, LysR family n=1 Tax=Erwinia tasmaniensis RepID=B2VHH8_ERWT9 Length = 302 Score = 227 bits (580), Expect = 4e-58, Method: Composition-based stats. Identities = 66/311 (21%), Positives = 116/311 (37%), Gaps = 22/311 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +DLNL+ + + RSV+ AA R+ +T + S +LA+LR D+ LF S G+ PTP Sbjct: 5 MDLNLVRVFIAIYETRSVSGAAARLFITQPSASYALARLRVETDNELFKRSRKGMLPTPT 64 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQIYQRYPQ 125 + + + + + +P +F LA +++L L K + P Sbjct: 65 ANQLYEVFKKSISGIEKAVADTRSFSPETSFHRFRLALSDLGELLLLPRLVKHLRTVAPN 124 Query: 126 ATIKLRNWDYDSLDA-ITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 +++ + +D + G +D R + + + L Sbjct: 125 VRLEVIPVEMHKMDEWLLTGHIDAALCSRNERISLA----------QRDRIMDERYVCLL 174 Query: 185 RKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 HP + T L +L HI + S + ++ ++E G ER IA+ +P F + Sbjct: 175 NNQHPRIGDTLTLPAWLNEQHIMVSAS-SGHYMVEERIKEYGFERRIALEVPHFAALGEL 233 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 A + LL+ + Y +V LP + L H Sbjct: 234 IASSE-LLVLLPFSAAKVYAARGNGRIVELPFELP-------NLEVYLYGHPEIGDITAK 285 Query: 305 VWLRETIKNLY 315 W T+KN Sbjct: 286 TWFYNTLKNAC 296 >UniRef50_A8LRQ2 Transcriptional regulator, LysR family n=1 Tax=Dinoroseobacter shibae DFL 12 RepID=A8LRQ2_DINSH Length = 317 Score = 227 bits (580), Expect = 4e-58, Method: Composition-based stats. Identities = 67/322 (20%), Positives = 117/322 (36%), Gaps = 33/322 (10%) Query: 1 MKK-SITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSP 59 MK I LD L + SV++AA ++ +T S S L +LR DPLFV S Sbjct: 20 MKDLDIYGLDGRQLKLFLCVFDTVSVSRAADQLGITQSTASHGLERLRKALGDPLFVKSG 79 Query: 60 LGLSPTPLMVSMEQNLAEWMQMSNLL-LDKPHHQTPRGLKFELAAESPLMMIMLNALS-- 116 G++PT + + + L + F +A + +L L Sbjct: 80 RGIAPTDTAKELAPRVRAVLIGLEGLRTSATYDPAQDTGAFRIATN---VTEILPKLIEI 136 Query: 117 -KQIYQRYPQATIKLRNWDY--DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYE 173 +I + P TI + ++ + ++ G D+ + L S P + E Sbjct: 137 KARICKAAPHVTIHFHDMGSRVNAGELLSAGAADLVIAVS---------LPSYPSLLLAE 187 Query: 174 VLFSDVPCVWLRKDHPALHQTW-NLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIA 232 L+SD + P +++ F+ H ++ + S ++ L+ G R I Sbjct: 188 RLYSDRSVCYYC---PKQRGPIESVEDFVEAKHAALDFGASIKSSVGQELERQGIIRRIR 244 Query: 233 MSLPEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTL 292 M+ P + D +AT P V + + + Sbjct: 245 MTAPNSHTLAELMRDSDY--VATMPLRLH--------KTVFKDFSYSTPPMALPPITHDM 294 Query: 293 LWHKRNSHNPKIVWLRETIKNL 314 LWH RN + + WLRE +++ Sbjct: 295 LWHVRNDNAARNSWLREVVRST 316 >UniRef50_C7Q503 Transcriptional regulator, LysR family n=1 Tax=Catenulispora acidiphila DSM 44928 RepID=C7Q503_CATAD Length = 328 Score = 227 bits (579), Expect = 5e-58, Method: Composition-based stats. Identities = 62/302 (20%), Positives = 116/302 (38%), Gaps = 25/302 (8%) Query: 22 ERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSMEQNLAEWMQM 81 E SVT+AA R++ +P+A+S++LA+LR DPL V + + PTP ++ + A ++ Sbjct: 41 ENSVTRAAARLHTSPAAMSRNLARLRRILQDPLLVRAGQTMVPTPRAQALREEAATVVRS 100 Query: 82 SNLLLDKPHHQTPR--GLKFELAAESPLMMIMLNALSKQIYQRYPQATIKLRNWDYDSLD 139 + LL P F L A + ++ L + P ++R + ++ Sbjct: 101 LSTLLSPGASADPATLTSTFTLQAADVIGAVLAPGLLRLSQHEAPGVAFRIRAEELEAGP 160 Query: 140 AITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPALHQTWNLDT 199 A+ G +D+ + + E L + +R HP Sbjct: 161 ALRDGRIDLEVGS----------IDHVDPETQVEELLTLRMTAAVRPGHPLTEGPLTPAR 210 Query: 200 FLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQPDNLL------L 253 H+ + T LD L + G R +++ LP ++ +AA+ D + Sbjct: 211 LAAAQHVVVSRRGRFTGPLDTALADHGLTRRVSVVLPGHLAAMSLAARSDIVCLAPAPLP 270 Query: 254 ATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWLRETIKN 313 A + L L+ +PL + + WH R++ + WLR ++ Sbjct: 271 GAAASPLTKEAAVLGLQLLDIPLELP-------PLVIGMAWHPRHTADRAHRWLRSAVRR 323 Query: 314 LY 315 Sbjct: 324 AL 325 >UniRef50_C1DPW4 Transcriptional regulator MexT n=34 Tax=Pseudomonadaceae RepID=C1DPW4_AZOVD Length = 314 Score = 227 bits (579), Expect = 5e-58, Method: Composition-based stats. Identities = 73/302 (24%), Positives = 129/302 (42%), Gaps = 26/302 (8%) Query: 15 CLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSMEQN 74 + LM ERSVT+ A+++ + A+S +LA+LR FDDPLFV + + PT + + Sbjct: 16 VFETLMHERSVTRTAEKLFLGQPAISAALARLRNLFDDPLFVRTGRNMEPTTRALEIFAL 75 Query: 75 LAEWMQMSNLLLDKPHHQTPRGLK--FELAAESPLMMIMLNALSKQIYQRYPQATIKLRN 132 L+ + + + + P F L + +L L +++ P T+ +R Sbjct: 76 LSPALDSISTAVSRAADFAPATSTAVFRLGLSDDVEFALLPPLLRRLRAEAPDITLVVRR 135 Query: 133 WDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPAL 191 +Y + + GE+ +G E +LP VL +P + R D A+ Sbjct: 136 ANYLLMPQLLASGEISVGVGYTE----------ALPANAKRRVLRRSMPRLL-RAD--AI 182 Query: 192 HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQPDNL 251 +LD + PH + + +D+ L +LGR R + +++P+F + A D Sbjct: 183 PGALSLDDYCARPHALVSFAGDLCGFIDDELAKLGRTRRVVLAVPQFNGLGTLLAGTD-- 240 Query: 252 LLATAPRY-CQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWLRET 310 ++A+ P Y + L ALPL ++W ++P WLR Sbjct: 241 IVASVPDYTAAALTAVGGLRAEALPLATPA-------FELHMVWRGAQDNDPAERWLRSR 293 Query: 311 IK 312 I+ Sbjct: 294 IQ 295 >UniRef50_B9KX50 Transcriptional regulator, LysR family n=3 Tax=Rhodobacter sphaeroides RepID=B9KX50_RHOSK Length = 308 Score = 226 bits (578), Expect = 7e-58, Method: Composition-based stats. Identities = 64/300 (21%), Positives = 121/300 (40%), Gaps = 22/300 (7%) Query: 22 ERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSMEQNLAEWMQM 81 ER +++AA R+N++ AVS +LA+LR DPLF + PT ++ LAE + Sbjct: 24 ERHLSRAAARLNMSQPAVSHALARLRHLLGDPLFRREGGRMVPTLRAQALAPPLAEALAQ 83 Query: 82 SNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQATIKLRNWDYDSL-DA 140 +L F L ++L L +Q+ + P+ + + +++ +A Sbjct: 84 IRSVLGPNAFDPAAPHVFRLTMSDYGAGLVLPGLMRQLRRIAPEIRLVVTQKSREAMIEA 143 Query: 141 ITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDH-PALHQTWNLDT 199 ++ GE D+ + LP ++ E+L +D L H P + Sbjct: 144 VSEGEADLALG----------VFPGLPPQLEAELLLTDRYICLLDPAHQPVRSGGLTAEA 193 Query: 200 FLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQPDNLLLATAPRY 259 F PH + + T ++ L++ G R +A+ LP + + + A D +L + Sbjct: 194 FWSAPHAHVAVQGDFTTEIELHLKDRGGARRLALILPHWSIAPKVIAGTDLILTVASR-- 251 Query: 260 CQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWLRETIKNLYASMA 319 +P PL +PF+ + +R +P + WL ++ + A Sbjct: 252 --------AVPAAPEPLIVTAPPVPLPPIPFSAIHARRRKADPALRWLIARLREVVGEEA 303 >UniRef50_B8E7T8 Transcriptional regulator, LysR family n=7 Tax=Shewanella RepID=B8E7T8_SHEB2 Length = 313 Score = 226 bits (577), Expect = 8e-58, Method: Composition-based stats. Identities = 57/315 (18%), Positives = 120/315 (38%), Gaps = 25/315 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 LDLNLL ++ + RS T+AA+ +++T S+VS ++++ R W + LF G+ PT + Sbjct: 7 LDLNLLRVFMVVYRTRSFTQAAEELDLTQSSVSNAISRFRVWVGESLFNRVGRGIEPTAV 66 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTP--RGLKFELAAESPLMMIMLNALSKQIYQRYPQ 125 M + + M +L H P +F + A ++ + + + Sbjct: 67 AREMYRKFEQPMADIETVLLGFEHFDPKCSQRRFYVYANESVIEALQTGVQALLQDA--D 124 Query: 126 ATIKLR---NWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCV 182 + R + D I V + + + + ++LF++ Sbjct: 125 IEVIFRESPPQEADLYRDILLERVAVAIDIKPAQQSL----------LSSKLLFTETLVC 174 Query: 183 WLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 + + HP + + H+ + + + A D + + R + Sbjct: 175 IVSRQHPRIQGAITHGQYFEEKHVFLNMRRFNLTAGDLFTEGVLPRRKMYSEQSSLLSMF 234 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 + + + +A RY Y +L + ++ +PL K + ++W + + NP Sbjct: 235 ATVGKSEAIGIAPL-RYASQYAELFGIQILPMPL-------KTRPIDLYMVWSSKYTQNP 286 Query: 303 KIVWLRETIKNLYAS 317 WLR + + AS Sbjct: 287 SHQWLRSLLLDASAS 301 >UniRef50_Q5W9E2 Putative LysR-type transcriptional regulator n=2 Tax=Sphingobium RepID=Q5W9E2_9SPHN Length = 329 Score = 226 bits (577), Expect = 8e-58, Method: Composition-based stats. Identities = 56/308 (18%), Positives = 115/308 (37%), Gaps = 25/308 (8%) Query: 12 LLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSM 71 L Q LM+ +SV AA+ +++ +S+ L +LR F + LFV + GL PT L ++ Sbjct: 6 HLTVFQALMRAKSVGVAAEMLDMPQPTLSRHLKQLREHFGNQLFVRTSRGLEPTSLAITA 65 Query: 72 EQNLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQIYQRYPQATIK 129 +++ +++ + L P F +AA +++L + + + P K Sbjct: 66 APAVSQTLELYHSRLSGEPTFDPATSNRDFHIAASDVGHLLVLPRVLQWVRDLAPGVRFK 125 Query: 130 LRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDH 188 + + + GEVDI +L + + LF + + + + Sbjct: 126 AIPLGGEKLIARLETGEVDIAIGS----------FPALYAGVVEQTLFPEEYVCVVPRSY 175 Query: 189 PALHQTWNLDTFLRYPHISICWE--QSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAA 246 ++ F H+ + ++ +L+++ I + F S +A Sbjct: 176 -LPAGRLTMNRFKAARHVLVDGRHLGHIHEDVEKLLRKIVGPSNITVMAESFLLSAHIAE 234 Query: 247 QPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVW 306 Q + L+ T P + ++ P+ WH+R +P W Sbjct: 235 QSE--LILTTPSRLTGLLNTKSVRILKPPVALP-------GFTVKQYWHERFHDDPGNRW 285 Query: 307 LRETIKNL 314 LR + + Sbjct: 286 LRGILSRM 293 >UniRef50_B7VJR0 Transcriptional regulator n=7 Tax=Vibrionaceae RepID=B7VJR0_VIBSL Length = 309 Score = 226 bits (577), Expect = 9e-58, Method: Composition-based stats. Identities = 73/322 (22%), Positives = 130/322 (40%), Gaps = 22/322 (6%) Query: 1 MKKSI-TTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSP 59 M K + ++LDLNLL ++ QE++ KAA+R+ V+ AVS++L KLR F+D LFV Sbjct: 1 MAKDLFSSLDLNLLRTFLIVYQEKNTRKAAERLFVSQPAVSQALQKLRHHFNDDLFVKVH 60 Query: 60 LGLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSK 117 GL PT + + +M ++ ++ + P+ ++A ++ + +L K Sbjct: 61 GGLQPTAFSEQLTNQIKPFMDGLSIAVNTSNTFDPKEIDYTLKIALSPVVLSCLSGSLFK 120 Query: 118 QIYQRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFS 177 I + P A +KL W S+ I + EV +G S L + L Sbjct: 121 DIKAQAPNAKLKLVPWSNSSVSDIQKDEVLMGVSY---------LGEKTSKEVYTRQLIE 171 Query: 178 DVPCVWLRKDHPALHQTWNLDTFLRYPHI-SICW-EQSDTWALDNVLQELGRERTIAMSL 235 +++RKDHP T + Y + + +L +L E I Sbjct: 172 LTGRIFVRKDHPLKQDTVTPNDMAGYEIASLVTPGWNDNFSLASQILTDLSIEHRIGFRS 231 Query: 236 PEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWH 295 + + D + + + Y L + + K L+ P H Sbjct: 232 ELVMAIIDVIQHTDMYMPHSNLFPVENYPTLRGIDV--------SVDGKTLKTPVYSYIH 283 Query: 296 KRNSHNPKIVWLRETIKNLYAS 317 +N ++P WL + I+ + + Sbjct: 284 IKNRNSPLTNWLSKLIEQVLSE 305 >UniRef50_Q1LS52 Transcriptional regulator, LysR family n=1 Tax=Cupriavidus metallidurans CH34 RepID=Q1LS52_RALME Length = 311 Score = 226 bits (577), Expect = 9e-58, Method: Composition-based stats. Identities = 73/319 (22%), Positives = 129/319 (40%), Gaps = 21/319 (6%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 S+ +DLNLL+ L+ L+ ER +++AA R+ ++ AVS SLA+LR DDPL V GL Sbjct: 2 NSLRGIDLNLLVVLEALLAERHISRAALRLQLSQPAVSHSLARLRQLLDDPLLVRGQGGL 61 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDK-PHHQTPRGLKFELAAESPLMMIMLNALSKQIYQ 121 T + LAE + +LL F+LA +++L L + + + Sbjct: 62 VLTARAHELAAPLAEALAQVRILLGPGGFQPATARRTFKLAMSDYGSLVVLPRLLRTVRK 121 Query: 122 RYPQATIKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 P + + +++ + G++D+ F + P + VLF D Sbjct: 122 AAPNIDLTVTQGSLETMTAQVADGQIDLAFGA----------FAFEPEGVRTAVLFDDDF 171 Query: 181 CVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQ 240 + + +L H+ + A+D + LG R IA ++P + Sbjct: 172 ACAVDAATVRDTGRLDHVAYLARSHVLVTAATERGDAIDAAVTRLGGRRKIACTVPHWSV 231 Query: 241 SLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 + + + +L TA R + +L + P F ++W + Sbjct: 232 APGLILGTNMVL-TTARRSLEALAD-DRLAIFEAPFTIP-------GFAFCMIWPAKADA 282 Query: 301 NPKIVWLRETIKNLYASMA 319 +P + WLRE + A A Sbjct: 283 DPGLTWLRERVLQAVAPEA 301 >UniRef50_C4WHZ4 Transcriptional regulator, LysR family n=1 Tax=Ochrobactrum intermedium LMG 3301 RepID=C4WHZ4_9RHIZ Length = 306 Score = 226 bits (576), Expect = 1e-57, Method: Composition-based stats. Identities = 65/299 (21%), Positives = 117/299 (39%), Gaps = 24/299 (8%) Query: 22 ERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSMEQNLAEWMQM 81 E V++AA R+N+T AVS +L + RA F+D L + + TP ++ L + Sbjct: 20 EAHVSRAADRLNLTQPAVSNALQRCRALFNDQLLERTRGTMRRTPKAETLRAPLKTLLAG 79 Query: 82 SNLLLDKPH-HQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQATIKLRNWDYDSLD- 139 L+D P + + ++ L K + P I ++ W Sbjct: 80 VIDLVDPPEVQLVSLQQTIRVCMADYPAIFVIGPLLKTLAHTAPGINIIVQPWHGAEAAR 139 Query: 140 -AITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPALHQTWNLD 198 A+ GE D+ S + + +L + + +R+DH A ++L+ Sbjct: 140 VALVTGESDLALS----------VFPDADKELQRRLLLEENYIIAMRRDH-AAANAFSLE 188 Query: 199 TFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQPDNLLLATAPR 258 ++L YPHI + D+ +D L E G R + + +P F+ + A D ++A P Sbjct: 189 SWLEYPHILVSGRGDDSSPVDRTLAERGLSRRVGVVVPNFDMVPELLANTD--MIAMLPS 246 Query: 259 YCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWLRETIKNLYAS 317 C L P+P P + WHKR + + ++ E + + Sbjct: 247 RC-MPEDTSSLAAFPPPIPV-------AGFPLHIAWHKRRQEDRGVQYVIEQLVRIMME 297 >UniRef50_C9PE36 Probable transcription regulator protein n=2 Tax=Vibrio RepID=C9PE36_VIBFU Length = 311 Score = 226 bits (576), Expect = 1e-57, Method: Composition-based stats. Identities = 66/310 (21%), Positives = 127/310 (40%), Gaps = 19/310 (6%) Query: 9 DLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLM 68 + LL L L++ R++T AA+R+NVT A+SK+L +R F DP+ + + T Sbjct: 3 NYKLLPALMALLETRNLTDAARRLNVTQPAMSKALRLIRDEFQDPILIRDGQQFTLTQRG 62 Query: 69 VSMEQNLAEWMQMSNLL-LDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQAT 127 +++ L + + L L + F LA S + M +L AL ++Y++ PQA Sbjct: 63 EQLKERLPALLFQLDQLYLPPQANIQHCDRSFRLAFNSFISMDILPALCAELYEKAPQAG 122 Query: 128 IKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKD 187 I+ W L + D+ L ++P + + L SD + + Sbjct: 123 IQTSLWQNAPLSELGETNFDLL----------GTLAVTVPENLYGKRLASDHYVICCCQT 172 Query: 188 HPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQ 247 + +++ + HI + +T +DN+ ++ ++R I +LP +L Sbjct: 173 NEIATHGMSMEHYFSARHILVSDLHEETRQVDNLFRQHKKQRRIFATLPSLRLALETVIG 232 Query: 248 PDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWL 307 + L+ Y + + L +++ P + LLWH + ++ + W Sbjct: 233 T-HCLVTVPLHIAAQYAKRYPLAVLSAPFELATHN-------YYLLWHAKFQNDDEHRWF 284 Query: 308 RETIKNLYAS 317 RE Sbjct: 285 RELCFAHLQR 294 >UniRef50_A3Y7F5 Transcriptional regulator n=1 Tax=Marinomonas sp. MED121 RepID=A3Y7F5_9GAMM Length = 339 Score = 226 bits (576), Expect = 1e-57, Method: Composition-based stats. Identities = 73/298 (24%), Positives = 137/298 (45%), Gaps = 14/298 (4%) Query: 21 QERSVTKAAKRINVTPSAVSKSLAKLRAWFD----DPLFVNSPLGLSPTPLMVSMEQNLA 76 +E SV++AA ++N++ SA+SK L KLR DPLF+ + GL T +MEQ L Sbjct: 33 EEGSVSRAAYQLNLSQSAISKQLTKLREQVGSALKDPLFIKAGTGLKATAKAQAMEQPLR 92 Query: 77 EWMQM-SNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQATIKLRNWDY 135 EW+++ +++ +F+++ +++ + + Q P+ + + Sbjct: 93 EWLRLYCQMMVPNHFDPQQDEREFKISIAENAFPVVVPGFMQSLTQAAPKLKLNIAKTHS 152 Query: 136 DSLDAITRGEVDIGFSGRESHPRS-RELLSSLPLAIDYEVLFSDVPCVWLRKDHPALHQT 194 SL + + ++D+ R++ R+ + + LF D +RK+HP L Sbjct: 153 KSLQLVEQSQLDLLIIARDTDLRAGFPWHINHLPEVPRVTLFEDENVCLVRKNHPVLTHP 212 Query: 195 WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQPDNLLLA 254 WNL++FL I I E+ W LD VL G+E + +F + +A D ++ Sbjct: 213 WNLESFLSLSRIKISVEEQTRWLLDEVLLAQGKESPDMAVVADFHSAALLAQHSDMSMIC 272 Query: 255 TAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWLRETIK 312 T+ + + ++L ++ +P + +LW + NP +WLRE I+ Sbjct: 273 TS-AFANQLCERYELKMLPMPFHL-------GPAKYFMLWPETQETNPAHIWLREFIQ 322 >UniRef50_Q0FX50 Transcriptional regulator, LysR family protein n=2 Tax=Rhodobacteraceae RepID=Q0FX50_9RHOB Length = 300 Score = 225 bits (575), Expect = 1e-57, Method: Composition-based stats. Identities = 66/318 (20%), Positives = 116/318 (36%), Gaps = 28/318 (8%) Query: 4 SITTLD---LNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPL 60 +++D LNLL + + S T AA+++NV SAVS ++AKLRA F DPLFV Sbjct: 7 DPSSIDFAALNLLRV---VHELGSFTAAAEKLNVNQSAVSYTIAKLRACFHDPLFVREGG 63 Query: 61 GLSPTPLMVSMEQNLAEWMQMSNLLLDK-PHHQTPRGLKFELAAESPLMMIMLNALSKQI 119 T + + + M + +L +A ++++ AL I Sbjct: 64 RQVSTDRCEEILARSLQMLGMLDEMLQPDAFEPGSATQNVTIACNYYERVLLIPALVSAI 123 Query: 120 YQRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 + P T+K+ N D + E D+ + L+++ Sbjct: 124 RREAPGMTVKVINALGDGHLRLLNREADVLIGP----------FARSESGFHSRRLYAEE 173 Query: 180 PCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFE 239 + HP ++D++L H+ I + A L+ G + P Sbjct: 174 YACLMDAAHPLADTALDIDSYLCLNHVLIDYGGGWQSAYLRELEAAGHRIAPVVVAPSPA 233 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 + + D L+AT PR + +L + P P +L+W + Sbjct: 234 GLATLIIESD--LVATVPRRLGEW-NADRLKVADCPFP--------GRFDVSLVWAAHTN 282 Query: 300 HNPKIVWLRETIKNLYAS 317 + WLR+ I + Sbjct: 283 ASAMHRWLRDLIWRVARR 300 >UniRef50_A6FLE2 Transcriptional regulator, LysR family protein n=1 Tax=Roseobacter sp. AzwK-3b RepID=A6FLE2_9RHOB Length = 323 Score = 225 bits (575), Expect = 1e-57, Method: Composition-based stats. Identities = 67/321 (20%), Positives = 126/321 (39%), Gaps = 21/321 (6%) Query: 1 MKKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPL 60 M + +L LL+ L + SV+ AA+R++++ VS +L +LR D LF Sbjct: 3 MMNTYRRSELGLLVVLVAIADTGSVSAAAERMSLSQPTVSHALRRLRDITGDQLFELIGR 62 Query: 61 GLSPTPLMVSMEQNLAEWMQMSNLLLDK-PHHQTPRGLKFELAAESPLMMIMLNALSKQI 119 + PT + M ++ +N LL T +++ ++ + + ++ Sbjct: 63 QMVPTAVATQMIDEARLVVEGANALLRPRAFDPTANSPTWKIGVSDYSLLALGAQILDRL 122 Query: 120 YQRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 A I+ +LD + + D F G PR + I LF D Sbjct: 123 SAINQAARIEFTPLGPHTLDDLLALKTDFAFYGDIVDPR-------ISPPIVAVELFKDK 175 Query: 180 PCVWLRKDHPALH----QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSL 235 + + HP +LD +L+Y HI +++ L +LG +RTI ++ Sbjct: 176 YVGVMCRSHPLAKTTRSDAISLDDWLQYNHIGFTSATPGVSSINQALLKLGLKRTIGLTS 235 Query: 236 PEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWH 295 P + +L + + LL P + LP+ + P+ +L H Sbjct: 236 PSHQMNLKLLSGTTMLL--CLPERLVHLVNKKAFITFHLPIHVE-------PYPYYILHH 286 Query: 296 KRNSHNPKIVWLRETIKNLYA 316 +R NP + ++R+ I ++ Sbjct: 287 ERLYANPALQFMRDIIHDVCD 307 >UniRef50_B7VH72 Transcriptional regulator n=4 Tax=Vibrionales RepID=B7VH72_VIBSL Length = 311 Score = 225 bits (575), Expect = 1e-57, Method: Composition-based stats. Identities = 59/326 (18%), Positives = 124/326 (38%), Gaps = 32/326 (9%) Query: 1 MKKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPL 60 M I NLL +M++ S++KAA +++ S +S +LA+L+ LFV Sbjct: 1 MSNEIPNF--NLLAVFSAVMEQGSLSKAADQLSTNQSTISTALARLKKEIGQELFVRKGR 58 Query: 61 GLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTP--RGLKFELAAESPLMMIMLNALSKQ 118 G++PT S+ + + + N + + KF +++ L I+LN+ + Sbjct: 59 GVTPTSYAQSLYEQIKTPIHELNDVFQSMANFDEQSSERKFVISSPEHLQWILLNSFAAL 118 Query: 119 IYQRYPQATIKLR-----NWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYE 173 P + L + D + + E D +++ +I E Sbjct: 119 -----PNQNLSLEVFDQPDSDERIYEDLLTQEFDAMI----------DIVVPEHPSIVSE 163 Query: 174 VLFSDVPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAM 233 L+ + R+DHP + + F+ H + + +L++ +R I Sbjct: 164 TLYEGEFVIVCREDHPRIQGEISEAQFMNEKHAVLDRTRRKVRSLNHYTSLDLSKRKIVF 223 Query: 234 SLPEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLL 293 ++ + +Q D + + + + L L P + + L+ Sbjct: 224 HGRSLFSNILLCSQSDYITVVPL-SMAVQFQERLGLQLFKPPFEY-------QPISHYLI 275 Query: 294 WHKRNSHNPKIVWLRETIKNLYASMA 319 W K+ +++P W RE + + +M+ Sbjct: 276 WLKKQNNDPAHKWFREQVISTSDAMS 301 >UniRef50_Q2BLC9 LysR family regulatory protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BLC9_9GAMM Length = 303 Score = 225 bits (574), Expect = 2e-57, Method: Composition-based stats. Identities = 74/320 (23%), Positives = 130/320 (40%), Gaps = 22/320 (6%) Query: 1 MK-KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSP 59 MK ++ +DL LL+ LM+ERSVT+AA R++ + A+S++L +LR F D LF Sbjct: 1 MKPDDLSKVDLRLLVAFNALMEERSVTRAADRLDSSQPAMSRNLRQLRDLFGDELFSRQS 60 Query: 60 LGLSPTPLMVSMEQNLAEWMQMSNLLLDKPH-HQTPRGLKFELAAESPLMMIMLNALSKQ 118 GLSP+P + Q L + L+ F ++ P+ ++ L + Sbjct: 61 HGLSPSPRAEQLHQQLQPLLDDILRLVSPVQLDPAKLERTFNISMIDPISQGLITPLLEY 120 Query: 119 IYQRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSD 178 + + P + +RN + S+D + G++D + + P I ++ ++ Sbjct: 121 LAEHAPGVKLIVRNLESYSMDDLIAGQLDFIINFG----------NEAPANIHSRLIANE 170 Query: 179 VPCVWLRKDHPALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPE 237 +P L HP + T+ R H+ L + L +R I + Sbjct: 171 LPVCMLSHTHPMADLPEMDQATYRRQRHVDFIVHGFSGHELPDWLFT---DREIFLETNN 227 Query: 238 FEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKR 297 +L + +++ Q + +L + S Q EVP LLWH R Sbjct: 228 MVTALNAICDSEMVMIG-GSLISQRSPRSDELTRIPF-----ISDQPIPEVPIRLLWHSR 281 Query: 298 NSHNPKIVWLRETIKNLYAS 317 + W+RE I N + Sbjct: 282 YHDDAAHRWMREVIDNAFNQ 301 >UniRef50_C3KNK2 Transcriptional regulator, LysR family n=1 Tax=Rhizobium sp. NGR234 RepID=C3KNK2_RHISN Length = 316 Score = 225 bits (574), Expect = 2e-57, Method: Composition-based stats. Identities = 66/309 (21%), Positives = 132/309 (42%), Gaps = 23/309 (7%) Query: 1 MKKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPL 60 M ++ +DL LL+ +M E SV++AA R+ ++ A+S +L +LR +D LF+ + Sbjct: 1 MPMNLANIDLKLLVVFDAMMAEGSVSRAAARLGMSQPALSNALNRLRLLLNDRLFLRTAE 60 Query: 61 GLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPR--GLKFELAAESPLMMIMLNALSKQ 118 G+ PTP + + + M+ L+ P F LA +++L L + Sbjct: 61 GMRPTPRAIEISGPIQSAMRQIEEALEPTA-FEPHDPDWTFSLAVSDHASVVLLPLLIEH 119 Query: 119 IYQRYPQATIKLRN-WDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFS 177 I + P+ T+ +++ + + + GE+D+ ++ +LP + +F Sbjct: 120 IARVAPRVTLNIQSRPNEELPALLDNGEIDLAVG----------VIPNLPRRFKHMAVFE 169 Query: 178 DVPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPE 237 D +R+ HP + L+ FL +S+ SD +D +L E G +R +A ++ + Sbjct: 170 DKYLCMMRQGHPLAGRPITLEEFLAADQLSVKPGISDISRVDRLLAEAGLKRRVATTVHQ 229 Query: 238 FEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKR 297 F + + ++ D ++L + + +P Q +W Sbjct: 230 FLAAPAIVSRSDLIVLV----FEKMVPIFDPSRFYFCSVPVPNMQVAAT-----AVWGDV 280 Query: 298 NSHNPKIVW 306 +S P W Sbjct: 281 HSELPAHKW 289 >UniRef50_A3YE73 Putative transcriptional regulator, LysR family protein n=2 Tax=Gammaproteobacteria RepID=A3YE73_9GAMM Length = 323 Score = 224 bits (572), Expect = 3e-57, Method: Composition-based stats. Identities = 85/319 (26%), Positives = 153/319 (47%), Gaps = 18/319 (5%) Query: 1 MKK-SITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSP 59 M ++ +++NLL+ LQ L++ERS + AA +N++ S++SK+LA+LR F+DPLF P Sbjct: 1 MDMSQLSRVNINLLVTLQSLLKERSASAAASSMNLSQSSISKNLAQLRHLFNDPLFHRGP 60 Query: 60 LGLSPTPLMVSMEQNLAEWMQMSNLLLDK-PHHQTPRGLKFELAAESPLMMIMLNALSKQ 118 GL PT L + +E L + + L + K +L+ +L + Q Sbjct: 61 HGLIPTQLSLEIEPKLNLALFALDNLFAPDEFNLKEHRAKLKLSMPESAFEFLLAPMMTQ 120 Query: 119 IYQRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSD 178 + P + D SLD + +G +D P+ L ++ + L+ D Sbjct: 121 LITAAPYVQLDTWFKDTLSLDHLGKGLLDFVI-----LPQDLGQTPKLGNHLNTQELYRD 175 Query: 179 VPCVWLRKDHPAL---HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSL 235 +RK HP L W+ +T+L+ HI + + D L + G ER IA+ + Sbjct: 176 ELICLVRKGHPVLTADKPNWDQETYLKCRHIHVRDNELGAPVFDQTLAQRGLERDIAIQV 235 Query: 236 PEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWH 295 P+F + + D L+ T+ + ++ + + LV+LP+P L V ++L+WH Sbjct: 236 PDFNSASAICQHSD-LIFTTSAHWGEHICKKY--DLVSLPMP-----CATLPVVYSLIWH 287 Query: 296 KRNSHNPKIVWLRETIKNL 314 +R+ +P +W ++ + N Sbjct: 288 QRSESDPAHLWFKQALINA 306 >UniRef50_A6CVD4 Transcriptional regulator, LysR family protein n=1 Tax=Vibrio shilonii AK1 RepID=A6CVD4_9VIBR Length = 325 Score = 224 bits (571), Expect = 5e-57, Method: Composition-based stats. Identities = 72/322 (22%), Positives = 136/322 (42%), Gaps = 22/322 (6%) Query: 1 MKKS-ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSP 59 M K LDLNLL ++L +E+++ KAA+R+ V+ AVS+SL KLR FDDPLFV Sbjct: 1 MPKDRFANLDLNLLRVFKVLYEEKNMRKAAERLYVSQPAVSQSLQKLRHQFDDPLFVKVK 60 Query: 60 LGLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSK 117 GL+PTP + +L + +++ P +A S + + L + Sbjct: 61 SGLAPTPFSEQLSSSLLPLLYDIENVVNDSDVFDPAQLDQDITIALSSSFVFSISGELYR 120 Query: 118 QIYQRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFS 177 + P I + +W+ ++ AI +GE+ +G + L+ ++ + Sbjct: 121 YFREHAPGLRIHIASWNDQTVTAIEKGEILLGINAE---------LTDSYPFMEKRTIGE 171 Query: 178 DVPCVWLRKDHPALHQTWNLDTFLRYPHI--SICWEQSDTWALDNVLQELGRERTIAMSL 235 C+ +RK+HP + +++ +YP + T + + LG + S Sbjct: 172 INACLLVRKEHPITKKKVTVESMSKYPLARLIVSNYSKYTSPTVEIFKRLGYPLEVGFSS 231 Query: 236 PEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWH 295 + + Q D + T + + LV L + + + + H Sbjct: 232 EYPVALIDVVQQSDMFMGTT-----NCFPIHNYPNLVMLSPDQVLPEAQYPALSYF---H 283 Query: 296 KRNSHNPKIVWLRETIKNLYAS 317 R+ ++ + WL E+I +++ Sbjct: 284 SRHQNSALVNWLNESIIHIFQQ 305 >UniRef50_A0R6U4 Transcriptional regulator, LysR family protein n=1 Tax=Mycobacterium smegmatis str. MC2 155 RepID=A0R6U4_MYCS2 Length = 297 Score = 224 bits (571), Expect = 5e-57, Method: Composition-based stats. Identities = 74/298 (24%), Positives = 131/298 (43%), Gaps = 24/298 (8%) Query: 21 QERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSMEQNLAEWMQ 80 +ER V++AA R+ ++ A+S++L +LR FDD L V G + TP ++ LA M Sbjct: 22 EERQVSRAAARVGLSQPAMSRALQRLRRTFDDALLVAGRDGYTLTPRAERLQARLAGLMP 81 Query: 81 MSNLLLDKP-HHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQATIKLRNWDYDSLD 139 ++L + LA + + L++ I+QR P +++ + D ++ Sbjct: 82 ELDVLFGPENFEPGTATESYRLALSDYSVALFGADLARTIHQRSPGSSVVYQQLDDEAFA 141 Query: 140 AITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPALHQT-WNLD 198 + G +D+ GR + + + LF+D + +HP + L Sbjct: 142 ELNAGGIDLLVVGRPAAS-----------HLAHRELFTDHFVCAVAHEHPLAARPQVTLQ 190 Query: 199 TFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQPDNLLLATAPR 258 +L YPHI I EQ T +++ L R +A+S P + ++ M A D L++ R Sbjct: 191 DYLAYPHIRIEIEQGTTHLIEDALP---VPRKVAVSTPFYTFAVDMLAGTD-LVVTFPAR 246 Query: 259 YCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWLRETIKNLYA 316 + ++ P F ++PF +WH R H+ +WLR T+ L A Sbjct: 247 LVAKLANPSAVRILDAPKSFP-------QLPFYAVWHPRLDHDASHLWLRSTLYELTA 297 >UniRef50_Q6LMQ1 Hypothetical LysR-like regular protein n=2 Tax=Photobacterium profundum RepID=Q6LMQ1_PHOPR Length = 319 Score = 223 bits (569), Expect = 7e-57, Method: Composition-based stats. Identities = 62/317 (19%), Positives = 125/317 (39%), Gaps = 21/317 (6%) Query: 4 SITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLS 63 + +DLNLL+ LM+ RSVTKAA ++++ SA+S +L++LR +DPLF + Sbjct: 9 NWRGVDLNLLVAFSALMETRSVTKAAAKLSIGQSAMSHNLSRLRLLLNDPLFERQGHQMI 68 Query: 64 PTPLMVSMEQNLAEWMQMSNLLLDKPHHQT--PRGLKFELAAESPLMMIMLNALSKQIYQ 121 T + + + + + + +P F + ++ AL I + Sbjct: 69 ATQRAIELSSTIENILNLVMTQVLRPDDFDSQHYQGTFRIGLTDYAELLFAPALFDAISR 128 Query: 122 RYPQATIKLRNWDYDS-LDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 P+ + N D + +++ +D+ ++ LP ++ + L+++ Sbjct: 129 LAPKCQLSFCNVDRHNYINSFNDKNLDVVIGS----------MTDLPKELESQYLYTEDH 178 Query: 181 CVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQ 240 + L +L ++ P + + +DN LQE G +R IA+ F Sbjct: 179 VCLFDQSATGLTVPVSLARYIITPQALVSPDGKLASPIDNQLQEQGFKRHIALGSSNFLT 238 Query: 241 SLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 + D LL R + + L + + +LW +RNS Sbjct: 239 IRHLLK--DRNLLCVVSRLMAK------IDIFNDNLTQCKPPVDIPDFHINMLWLRRNST 290 Query: 301 NPKIVWLRETIKNLYAS 317 + ++ WL + + + Sbjct: 291 HQRMEWLCQIVSETVSE 307 >UniRef50_A0KFY0 Transcriptional regulator, LysR family n=2 Tax=Aeromonas RepID=A0KFY0_AERHH Length = 307 Score = 223 bits (569), Expect = 7e-57, Method: Composition-based stats. Identities = 82/316 (25%), Positives = 130/316 (41%), Gaps = 15/316 (4%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 ++ L L+ L LL+ +SVT+ A+R+ TPS VSK+L +LR D L L Sbjct: 6 LSRLGGRHLVTLHLLLDSQSVTRTAERLCTTPSTVSKTLNQLRDLLGDQLLYRQGNQLLL 65 Query: 65 TPLMVSMEQNLAEWMQMSNLLLDK-PHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRY 123 TP + L + N L + + A M+ + + Q+ + Sbjct: 66 TPFAERLGPTLHRLLSELNGLTGQGGFDPASWQGQLTFALRESGMVWPMGPILAQLMREV 125 Query: 124 PQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVW 183 P +RN D L A+ G++D + + +E L D Sbjct: 126 PGLVPDIRNKDEQGLAALAAGKLDFVILPHDQSQPLPRQQ-----GLVWETLREDKLVCL 180 Query: 184 LRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 LR DHPAL ++W+LD +L + HI+I ++ + L +L R IA LP+F + Sbjct: 181 LRADHPALARSWDLDAYLSWRHIAIRDQELANPFFEQSLAQLQVRRQIAAILPDFGSAAA 240 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 + Q D +L A + Q LV+ P+PFD V +L+W+ P Sbjct: 241 LLRQSDLILTAIG----GWAEQAAPHALVSRPVPFD-----YGAVTHSLVWYGPAGEEPA 291 Query: 304 IVWLRETIKNLYASMA 319 W R+ I L + Sbjct: 292 RRWFRQRILQLARELG 307 >UniRef50_Q2SKI3 Transcriptional regulator n=3 Tax=Oceanospirillales RepID=Q2SKI3_HAHCH Length = 296 Score = 223 bits (569), Expect = 7e-57, Method: Composition-based stats. Identities = 62/318 (19%), Positives = 125/318 (39%), Gaps = 26/318 (8%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 I L+++ L L L + ++T AA+ ++++ A+S+ L KLR D LFV + G++P Sbjct: 2 IEKLEIHHLRTLDALYRFGNITAAAESLDLSQQAISQQLKKLRGILSDQLFVRTGHGVAP 61 Query: 65 TPLMVSMEQNLAEWMQMSNLL-LDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRY 123 TP +E ++ + + + L + ++A +++ L ++ + Sbjct: 62 TPYAKQIEPHIQRVLAHLHAIPLPEAFSLAKMERTLVISATDYTQKVIVTGLVAELRKAA 121 Query: 124 PQATIKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCV 182 P+ + + N + SL + +GE+D+ F+ +P + E LF++ Sbjct: 122 PRVKVVVANIESASLTRKMRQGEIDLAFTSH----------GYVPEGLLSEPLFTERYLC 171 Query: 183 WLRKDHPALHQTWNLDTFLRYPHISICWE-QSDTWALDNVLQELGRERTIAMSLPEFEQS 241 A +LD + I + D ++ G R + +S P F + Sbjct: 172 VSADAGLAGQGEISLDQLVARDFIVTSPGVGGFAGSADAWFEQQGLRRNVTISAPSFHIA 231 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 D ++A P L ++PL P +H + Sbjct: 232 QEYLKATD--MVAFVPSRLLPCEGLFEIPLKKYP----------PGYEVVAAYHPSAKDD 279 Query: 302 PKIVWLRETIKNLYASMA 319 P I+W + ++ AS+A Sbjct: 280 PLIMWALKAVQQ-CASLA 296 >UniRef50_P52698 HTH-type transcriptional regulator phcA n=16 Tax=Burkholderiaceae RepID=PHCA_RALSO Length = 347 Score = 223 bits (569), Expect = 8e-57, Method: Composition-based stats. Identities = 79/324 (24%), Positives = 131/324 (40%), Gaps = 28/324 (8%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 + +D LL+ L+ +R+ T A+++++T AVS SL +LR FDDPLF+ P GL+P Sbjct: 1 MVNVDTKLLVIFVELLSKRNATYVAEKMHMTAPAVSHSLGRLREIFDDPLFIRVPHGLTP 60 Query: 65 TPLMVSMEQNLAEWMQ---MSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQ 121 TP + + + E + N F ++ L + + ++ + Sbjct: 61 TPKALELGPKVREMLDLWAAINEGDIATFDPLEAAGTFNISFAGTLGDALFDRFLLRVKR 120 Query: 122 RYPQATIKLRNWD--YDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 P ++L + A+ E+D+ FS + I EV+ S Sbjct: 121 LAPGLQVRLTESSSWEADVAAMRSNELDLAFSP----------FPTRHPEIVEEVVTSFN 170 Query: 180 PCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTW------ALDNVLQELGRERTIAM 233 V RKDHP L +LD +L HI I T LD LQ+ G +R M Sbjct: 171 MWVCARKDHPVLKDHCSLDQYLECEHIFIAQGNPGTRAAPSLIPLDYALQQRGLKRHSTM 230 Query: 234 SLPEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLL 293 ++ + +AAQ D + + + L LP + + +L Sbjct: 231 TVHAWRTQAEVAAQTDMIF-TVNSLMKDLVCETYNLNAFPLPSELETV------LGLNML 283 Query: 294 WHKRNSHNPKIVWLRETIKNLYAS 317 WH+ + +P +VW R K + A Sbjct: 284 WHRSRNTHPMLVWARNLFKQVVAE 307 >UniRef50_D0LJ37 Transcriptional regulator, LysR family n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LJ37_HALO1 Length = 306 Score = 222 bits (568), Expect = 8e-57, Method: Composition-based stats. Identities = 66/301 (21%), Positives = 121/301 (40%), Gaps = 22/301 (7%) Query: 22 ERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSMEQNLAEWMQM 81 ER +T+AA+R ++ SA+S +L +LR DPL V GL TP + + ++ + Sbjct: 20 ERHITRAARRCGISQSAMSHALRRLRDTLGDPLLVRGGSGLVCTPRAQQLGEVVSRTLAE 79 Query: 82 SNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQIYQRYPQATIKLRNWDYD-SL 138 + P P F +AA + + +L L +++ + P+ ++ + D + L Sbjct: 80 LREAMFPPPPFEPSTSERCFRIAAVDLMTLPLLVPLLRRLEREAPRCSVSMHTLDPNRYL 139 Query: 139 DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPALHQTWNLD 198 + E+D L + L ++ L HP L + W + Sbjct: 140 QQLEDDELDAVI-----------LGPEDTRGMRRRALCNEPMVCVLSASHPVLQEPWTRE 188 Query: 199 TFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQPDNLLLATAPR 258 +F H + + + L+EL E I + +P F + +AA L L + + Sbjct: 189 SFASLRHALVMPHDQISGDFEATLRELAGEFDIKLRVPYF-VAGALAAVLSGLALVVSAQ 247 Query: 259 YCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWLRETIKNLYASM 318 +L + + LP F V L+WH +N + WLRE + +++ Sbjct: 248 LAHTVGELASVAIRPLPFDF-------GPVAIWLVWHPKNDDDAANRWLREAVLDIWRES 300 Query: 319 A 319 A Sbjct: 301 A 301 >UniRef50_A7JY25 Transcriptional regulators LysR family n=9 Tax=Vibrionaceae RepID=A7JY25_VIBSE Length = 304 Score = 222 bits (568), Expect = 9e-57, Method: Composition-based stats. Identities = 65/317 (20%), Positives = 121/317 (38%), Gaps = 21/317 (6%) Query: 7 TLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTP 66 D NLL L ++++ R+ T AA+R+ + AVS+SL K+R F+D + V + TP Sbjct: 2 NFDYNLLKVLAVILETRNTTTAAERLCTSQPAVSRSLRKIRDLFNDDILVRKGTNMELTP 61 Query: 67 LMVSMEQNLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQIYQRYP 124 ++ L+ + + L++ H P +A S + A ++ + + P Sbjct: 62 KAEEIKAQLSGIINDIDKLVNVSHSFDPATESSVLRVAINSSIAQWFSAAFTQLLAKEAP 121 Query: 125 QATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 + + +W + D I GE+ G + LP + + D + Sbjct: 122 FMNLVIEDWTETTPDKIDAGEIAFGINYFPM---------ELPKHLVQKKGGRDDFALAC 172 Query: 185 RKDHPALHQTWNLDTFLRYPHIS--ICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 R HP + LD Y + I + +LQ I + L Sbjct: 173 RATHPHGGKRMYLDDISEYAYAVHIIQHWNEKEDHISRLLQPFSVVPRIQLRTTHINTIL 232 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 + A D L + ++ + FD KLE F ++ + ++P Sbjct: 233 NLVADSDVLFPC-SRHLINQLDKRFSF------IEFD-DALPKLEGNFGYVYSVKRRNDP 284 Query: 303 KIVWLRETIKNLYASMA 319 I+W+ T+++L S+ Sbjct: 285 LILWVNNTVESLMKSLG 301 >UniRef50_A0AZB3 Transcriptional regulator, LysR family n=14 Tax=Proteobacteria RepID=A0AZB3_BURCH Length = 339 Score = 222 bits (568), Expect = 1e-56, Method: Composition-based stats. Identities = 67/317 (21%), Positives = 116/317 (36%), Gaps = 17/317 (5%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 + +DLNL+ L L+ E SVT AA+R+ ++ SA+S++L +LR D L V + L P Sbjct: 21 MEDIDLNLVTALDALLSEASVTGAARRLGLSTSAMSRTLTRLRTATGDQLLVRAGRKLVP 80 Query: 65 TPLMVSMEQNLAEWMQMSNLLLDKPH---HQTPRGLKFELAAESPLMMIMLNALSKQIYQ 121 TP ++ + + +L F + A + M ++ + + Sbjct: 81 TPHAAALRDRVHAVTSDARAVLRPATADVDLATLTATFTIRAAASFMEMLSGPVVAALGD 140 Query: 122 RYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPC 181 P+ I+ A+ G VD+ R + +LF D Sbjct: 141 VAPRVRIRFVPKLDRDPQALRDGTVDLEIGKRGDDA----------PELHTRMLFHDWHV 190 Query: 182 VWLRKDHPA-LHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQ 240 R HP + H+ +D+ G + + +P + Sbjct: 191 AVARAGHPLFASARITPARYAACRHVMAVQLGDFGGLVDDSTANTGNGPAVHVVVPGYPD 250 Query: 241 SLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 ++ +AA D L+A PR L AL L E + + + LWH R Sbjct: 251 AMRVAASTD--LIALVPRSSLGNACSQGLT-EALGLRSFEIPARLPAILVSALWHPRMHG 307 Query: 301 NPKIVWLRETIKNLYAS 317 +P LR+T+ + Sbjct: 308 DPVHRRLRDTVIAVCQR 324 >UniRef50_Q1ZAU1 Transcriptional regulator, LysR family protein n=1 Tax=Photobacterium profundum 3TCK RepID=Q1ZAU1_PHOPR Length = 319 Score = 222 bits (567), Expect = 1e-56, Method: Composition-based stats. Identities = 73/315 (23%), Positives = 124/315 (39%), Gaps = 20/315 (6%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 + DLNLL+ L L++E+ V++ A +N++ + +S L KLR FDDPL + S G+ Sbjct: 9 LAKKDLNLLVFLAALLEEKHVSRTAVMLNISQATMSYHLQKLRKEFDDPLLIKSKNGMVL 68 Query: 65 TPLMVSMEQNLAEWMQMSNLLL-DKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRY 123 + L +++ L++ + + + + + +L L QI Sbjct: 69 SNLGAALQVPLSQLFNQLDSTVYKRTFLPADAEGTIRFCTQDASLKHLLIPLLSQISVAA 128 Query: 124 PQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVW 183 P I+L W +D +A+ G++D+ F G L S P +I ++ V Sbjct: 129 PNLCIELVEWPFDIFNALENGDIDVVFGG----------LGSAPPSIYGVKYYTSRLSVV 178 Query: 184 LRKDHPALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 DHP + L+ +PH+ I +D ++ G R I + P + +L Sbjct: 179 THVDHPFTRISSPKLEDVFSFPHVRIYPGAEGERLVDEAARKQGINRPITLKTPSYNIAL 238 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 + +A R LV + EV L W+ R S P Sbjct: 239 ETIKLGRH--IACFNRLVVSTMAQDSSELVITDVE------GLPEVDIYLYWNARVSKEP 290 Query: 303 KIVWLRETIKNLYAS 317 +W RE I L Sbjct: 291 MHIWFREQINMLIKQ 305 >UniRef50_B7VQ80 Transcriptional regulators, LysR family n=6 Tax=Vibrio RepID=B7VQ80_VIBSL Length = 304 Score = 222 bits (567), Expect = 1e-56, Method: Composition-based stats. Identities = 59/318 (18%), Positives = 117/318 (36%), Gaps = 23/318 (7%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 + LDLNL+ +L++ ++ A ++ ++ AVSK+L +LR +FDD LF GL P Sbjct: 1 MKQLDLNLIRVFLVLLETQNTRIAGNKLALSQPAVSKALGRLREYFDDELFTRVHSGLKP 60 Query: 65 TPLMVSMEQNLAEWMQMSNLLLDKPHHQTPR--GLKFELAAESPLMMIMLNALSKQIYQR 122 TP + + + L M+ + ++ + P +A + + L + Q Sbjct: 61 TPRALELGERLPMIMESLDDVILETPSFDPAEYQGNITIAINGFISNWLGARLCLGLIQE 120 Query: 123 YPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCV 182 P A + + NW +L + GE+ + + ++++ D Sbjct: 121 APNAQVNIVNWGSQTLKKLLDGEIQAAINFSPIDTNKQ---------FTHQIIGEDDFVG 171 Query: 183 WLRKDHPALHQTWNLDTF--LRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQ 240 ++ HP + + Y + I + L + Sbjct: 172 LVKTGHPLAGKVISQQEIDEAEYASLVIPGWNDIQPYIAKHLSTEQL--KVKARSSYLHT 229 Query: 241 SLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 L + Q D +L + + Y N+ + ++ P E +K + V +KR Sbjct: 230 LLEVIKQSDMILPC-SKQLALYLNE--EFDYLSFPDYAPEELKKIVLVESH---NKRMH- 282 Query: 301 NPKIVWLRETIKNLYASM 318 P WL+ I ++ Sbjct: 283 -PMNQWLKRKIITTSQTI 299 >UniRef50_A9GK88 Transcriptional regulator, LysR family n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9GK88_SORC5 Length = 382 Score = 222 bits (566), Expect = 2e-56, Method: Composition-based stats. Identities = 63/301 (20%), Positives = 119/301 (39%), Gaps = 21/301 (6%) Query: 21 QERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSMEQNLAEWMQ 80 + SVT AA+R+ V A+S++L KLR D L V + L T + + + Sbjct: 93 ETESVTLAARRMRVGQPAMSRTLEKLRQATGDELLVRTGRKLVRTRRASEILPEVRSLLS 152 Query: 81 MSNLLLDKPHHQTP--RGLKFELAAESPLMMIMLNALSKQIYQRYPQATIKLRNWDYDSL 138 + +L P P A + ++ + L +++ P I++R +S Sbjct: 153 GAQRVLGPPSAFVPRTAQGVVTFALGDDMQAVLASRLLERMRAAAPGLDIRVRPLVLESA 212 Query: 139 DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPALHQTWNLD 198 RG VD+ +L L ++ Y RK + L+ Sbjct: 213 HEAVRGVVDLAVMPDLRGQVRIPMLDELVISAQYTR----RFVTVTRK-----RKKLTLE 263 Query: 199 TFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQPDNLLLATAPR 258 FL H + + +D+ L+ LG+ R +A+++P F+ ++ + + D L+AT P Sbjct: 264 AFLAAEHALVSPGGEEGGYVDDALRALGKRRRVAVTVPGFQAAITLVRELD--LVATLPD 321 Query: 259 YCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWLRETIKNLYASM 318 + ++A L E+P + W +R + + + WLRE + + + Sbjct: 322 DI--------VRVLAPRLHRQACPVSTPELPMCVAWARRFNQDARHRWLRELVSEVVREL 373 Query: 319 A 319 Sbjct: 374 G 374 >UniRef50_A6CYC8 Probable transcription regulator protein n=1 Tax=Vibrio shilonii AK1 RepID=A6CYC8_9VIBR Length = 294 Score = 221 bits (564), Expect = 2e-56, Method: Composition-based stats. Identities = 68/308 (22%), Positives = 129/308 (41%), Gaps = 19/308 (6%) Query: 9 DLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLM 68 + LL LQ L++ RS+T AA+R+ VT SA+S++L +LRA F DPL + T Sbjct: 5 NYKLLRPLQALLETRSLTDAAERLRVTQSAMSRNLTQLRAEFSDPLLIREGKTFVLTARG 64 Query: 69 VSMEQNLAEWMQMSNLLLDKPH-HQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQAT 127 S+++ L + L + + +A S + ++ LS + + P A+ Sbjct: 65 ESLKRALPHVLSAIEGLYSDSSIEPSEIKRTYRIAYSSFSSLSLVKDLSLALMSQAPNAS 124 Query: 128 IKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKD 187 + W + +D ++ +VDI + +P I + + + V K+ Sbjct: 125 FSMELWQHRDIDELSTEDVDILITPA----------HRIPDNIYGKRIADNDYVVVRSKE 174 Query: 188 HPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQ 247 H QT L+ +L H+ + + ++ L +R +A++L ++L + + Sbjct: 175 HHKSQQTLCLERYLESRHVLLHLVANIDLEVNEFFANLSVKRNVALTLSSAREALDVVRE 234 Query: 248 PDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWL 307 D LL+ + + LP + LLWH + ++ WL Sbjct: 235 SD-LLVTLPKYLVERLPDKSDFDIHPLPFSLPSH-------SYYLLWHAKWQNDVAHRWL 286 Query: 308 RETIKNLY 315 R+T+ +L Sbjct: 287 RDTVFSLL 294 >UniRef50_A3K9S7 Transcriptional regulator, LysR family protein n=1 Tax=Sagittula stellata E-37 RepID=A3K9S7_9RHOB Length = 312 Score = 221 bits (564), Expect = 3e-56, Method: Composition-based stats. Identities = 59/319 (18%), Positives = 122/319 (38%), Gaps = 22/319 (6%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 +++ L++ LL + + R++++A + + + +S LA LRA DD LF+ P G+ Sbjct: 13 QALRHLEIKHLLAFEAIYSTRNISRAGQALGFSQPTMSNLLATLRAVLDDRLFLRQPRGV 72 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTP--RGLKFELAAESPLMMIMLNALSKQIY 120 PT + + ++ + P +F++ A +++ +L ++ Sbjct: 73 QPTSRADELITPVRSALREIERITKPRASFDPENDTREFKIHALDIFESLLIPSLVNRV- 131 Query: 121 QRYPQATIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 + P T KL ++A+ GE DI +L + ++ + S Sbjct: 132 EGNPGITFKLLLAPKVPIVEALDSGEADIAIG----------MLPRNQPDLRWQDVLSLD 181 Query: 180 PCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFE 239 V RK HP + L H+++ + R + + Sbjct: 182 LVVIARKGHPRIDDQVTLQDLAELGHVAMDMAPGALANAHLFSLKNRPARRDVVRVTRPS 241 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 + + AQ D + A + + ++ + P+P F + WH RN Sbjct: 242 AIIEIVAQTDLVGYANRRQLAASPWR-ERIQALEPPVPLSTQ-------DFQMTWHLRNQ 293 Query: 300 HNPKIVWLRETIKNLYASM 318 +P +VWLR+ I ++ + Sbjct: 294 DDPSLVWLRDEIVSILGRV 312 >UniRef50_Q5E5X9 Transcriptional regulator, LysR family n=2 Tax=Vibrio fischeri RepID=Q5E5X9_VIBF1 Length = 312 Score = 221 bits (564), Expect = 3e-56, Method: Composition-based stats. Identities = 71/322 (22%), Positives = 129/322 (40%), Gaps = 21/322 (6%) Query: 1 MKKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPL 60 MK I LDLNLL +L++ R+ KA++R+ ++ VS++LA+LR +F+D LF+ S Sbjct: 1 MKHKIHQLDLNLLKVFTVLLEVRNTRKASERLFLSQPGVSRALARLRDFFEDELFIRSHY 60 Query: 61 GLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQ 118 GL+PTP + + N+A M + L+ + +A + + + L Sbjct: 61 GLTPTPKALEIGDNIAPAMTLLFSALEPSDKFDSSQLEGRINIAMNGFIAPSIASNLCGI 120 Query: 119 IYQRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSD 178 I ++ P + NWD + + I ++ +G + + + VL +D Sbjct: 121 ILEKAPNVEVVFSNWDRATPENILHDQIQLGLNYFPL---------EISKQLSQSVLTTD 171 Query: 179 VPCVWLRKDHPALHQTWNLDTFLRYPHI--SICWEQSDTWALDNVLQELGRERTIAMSLP 236 + RK+HP + + + + I + N L+ L +E + + Sbjct: 172 RFVLIGRKEHPLITGEESFENAAQLDIATLVIPNWNEHKAYVVNSLKSLNKECRMRLRSS 231 Query: 237 EFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHK 296 + L + D L + + L LP D Q L+ Sbjct: 232 YLDVILNSIQRTDMLFPCS-----ESLANTLGSDFQKLLLPDDVIQ---PGGEIGLVVAS 283 Query: 297 RNSHNPKIVWLRETIKNLYASM 318 +N P I WL+E + A + Sbjct: 284 KNRRTPLIKWLKECTQEAAAEI 305 >UniRef50_D0XC19 Putative uncharacterized protein n=1 Tax=Vibrio harveyi 1DA3 RepID=D0XC19_VIBHA Length = 317 Score = 221 bits (563), Expect = 4e-56, Method: Composition-based stats. Identities = 89/324 (27%), Positives = 137/324 (42%), Gaps = 22/324 (6%) Query: 1 MKKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPL 60 MK + LDLNLL ++ QE+++ KA+ R+ VT A+SKSL KLR FDDPLFV P Sbjct: 1 MKDLYSNLDLNLLRTFLVIYQEQNLQKASNRLFVTAPALSKSLTKLRNHFDDPLFVKVPT 60 Query: 61 GLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPR--GLKFELAAESPLMMIMLNALSKQ 118 GLSPT + + + L+ + P K +A L+ + L + Sbjct: 61 GLSPTHFATELYGVIEPTFDKLSKKLNSLNQFDPAELEGKITIAISPVLLQALGKDLFSE 120 Query: 119 IYQRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSD 178 I ++ P + L W+ +SLD + G +G + R I EV+ D Sbjct: 121 ISRQAPNVELHLPCWNNNSLDDLANGTCKVGINYELPFSR---------KDILSEVVGQD 171 Query: 179 VPCVWLRKDHPALHQTWNLDTFLRYPHI--SICWEQSDTWALDNVLQEL--GRERTIAMS 234 + +++RKDHP +T +L + YP + D VL+E IA Sbjct: 172 LFGIYVRKDHPLAAKTISLADTISYPLALLLVTDWNIDEPYAIKVLREYYPDVPPKIAFR 231 Query: 235 LPEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLW 294 L + A+ D L TA + + Y L L + + Q KL + + Sbjct: 232 SELPSPILEILAETDLLFPYTAFFHIERYPNLTALNIK-------KDQLDKLLKRIHVYY 284 Query: 295 HKRNSHNPKIVWLRETIKNLYASM 318 ++ +P WL I NL + Sbjct: 285 PNKDRFDPVQQWLMAIISNLLNQL 308 >UniRef50_A6W1I8 Transcriptional regulator, LysR family n=2 Tax=Marinomonas RepID=A6W1I8_MARMS Length = 326 Score = 220 bits (562), Expect = 5e-56, Method: Composition-based stats. Identities = 64/330 (19%), Positives = 123/330 (37%), Gaps = 25/330 (7%) Query: 1 MK-KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSP 59 M I LD+ LL+ +M+E SV++AA+R+ VT A+SKSL +LR F D LF Sbjct: 1 MHLDDILKLDIKLLVAFVTIMEEGSVSRAAERLGVTQPALSKSLQRLRELFKDSLFTRQA 60 Query: 60 LGLSPTPLMVSMEQNLAEWMQMSNLLLDKPH-HQTPRGLKFELAAESPLMMIMLNALSKQ 118 GLSPT + + + + L+ + +L + + L Sbjct: 61 YGLSPTARASELHDLIQPILNSLSELMSPNSLDLKNLNRRIKLRVGEGDLENFIEPLLAS 120 Query: 119 IYQRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSD 178 + + P + + +W SLD + G VD+G ++ P + +++ Sbjct: 121 LQYQAPGMRLAISSWGDYSLDELVSGNVDLGI----------MRINDTPNNVRSKLIDYM 170 Query: 179 VPCVWLRKDHPA-LHQTWNLDTFLRYPHISICWEQSDTWAL---DNVLQELGRERTIAMS 234 C+ L + HP + L + ++ + + L++ G + Sbjct: 171 EACIILSEAHPLYHKDELTVAELLSHKVVTHHLHNNRDSTFFKTEQKLKQQGYFIQPDLE 230 Query: 235 LPEFEQSLFMAAQPDNLLLATAPRYCQYY-------NQLHQLPLVALPLPFDESQQKKLE 287 ++ + + L + + + + L+ +P E + Sbjct: 231 TDSLMVAMQAVKR--GMALVASRSIGDLFLQVMCEKAHFYPVKLLPIPKEVLELDEYSGR 288 Query: 288 VPFTLLWHKRNSHNPKIVWLRETIKNLYAS 317 P + WH+R +++ WLRE I Sbjct: 289 HPIHIFWHERFNNDLAHRWLREQIIYFMRE 318 >UniRef50_Q085G5 Transcriptional regulator, LysR family n=1 Tax=Shewanella frigidimarina NCIMB 400 RepID=Q085G5_SHEFN Length = 318 Score = 220 bits (562), Expect = 5e-56, Method: Composition-based stats. Identities = 52/316 (16%), Positives = 119/316 (37%), Gaps = 21/316 (6%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 + LDLNLL + Q S+T+AA+++ +T S+VS ++ +L+ + LF+ G+ Sbjct: 15 NKLPMLDLNLLRVFCTVCQHSSITRAAEQLGLTQSSVSNAINRLKHALECELFIRIGRGI 74 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQIY 120 PT + + + + L P F + A ++ ++ L + Sbjct: 75 EPTAIGTHIFNTVQPMLDTIEQTLMGIKAFDPSTSKRVFTIYANEAVIDLLQPQLDNALA 134 Query: 121 QRYPQATIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 + ++ + + + +VD+ + + + Sbjct: 135 HLSVRVVLRNSPVFEAEQFQDLQMQKVDLVIDIVPPKL----------KMFSCQKVAQER 184 Query: 180 PCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFE 239 +R+ HP + + D + H+ + + + D + +RT+ Sbjct: 185 IVCVVRQGHPVIKNHLSRDDYFAAEHVMYRFHRDNMRVADIIANAPLPQRTLYSEQSSLL 244 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 L + ++ + + +A + Q Y +L +L L+ LP + +W +++ Sbjct: 245 SMLSLISKSNAIGIA-PYIFTQNYAELFKLTLLELPFE-------TRPIDLYSIWPTKHA 296 Query: 300 HNPKIVWLRETIKNLY 315 + +WLR+TI L Sbjct: 297 LDKSCIWLRKTIVELI 312 >UniRef50_Q0S6Z6 Transcriptional regulator, LysR family protein n=1 Tax=Rhodococcus jostii RHA1 RepID=Q0S6Z6_RHOSR Length = 307 Score = 220 bits (561), Expect = 7e-56, Method: Composition-based stats. Identities = 59/309 (19%), Positives = 112/309 (36%), Gaps = 19/309 (6%) Query: 6 TTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPT 65 LDLNL++ L L++ERSV++AA + ++ A+S +LA+LR +F DPL T Sbjct: 12 AKLDLNLIVSLDALLRERSVSRAAIEVGLSQPAMSAALARLRRYFGDPLLARVGNSYQLT 71 Query: 66 PLMVSMEQNLAEWMQMSNLLLDKPH--HQTPRGLKFELAAESPLMMIMLNALSKQIYQRY 123 PL S+ + + + +LD +F L ++ + + +++ + + Sbjct: 72 PLARSLVERTTVAISAVDRVLDAEPGIEIERSSREFTLIMSDYMLAAVGDTITRDLLAQA 131 Query: 124 PQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVW 183 P I + +D + + + + LFSD Sbjct: 132 PHLRINFVQLRPEIVDRASD---------SLRTADALVVPRGFVSDLPSVDLFSDRWVCV 182 Query: 184 LRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 + +D+ + LD YP + ++ G E + + + + Sbjct: 183 VAEDNEHVGDAIRLDQLTEYPWAVFQTHPHAATTPLHQVRAQGVEPYVQVVGENYLALPY 242 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 A D + L R + + V PL + L WH + +P+ Sbjct: 243 FVAHTDRIAL-LPERLAARMSGGMGIRSVDFPL-------NLAPLNHALWWHPMYNADPE 294 Query: 304 IVWLRETIK 312 WLR + Sbjct: 295 HRWLRAQLV 303 >UniRef50_Q2T8G4 Transcriptional regulator, LysR family n=14 Tax=Burkholderia RepID=Q2T8G4_BURTA Length = 351 Score = 220 bits (561), Expect = 7e-56, Method: Composition-based stats. Identities = 63/320 (19%), Positives = 109/320 (34%), Gaps = 35/320 (10%) Query: 7 TLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTP 66 LDLNLL + + ER V +AA R+ VT +VS L +LR F D LFV + G+ PTP Sbjct: 30 DLDLNLLKTFRAVYVERHVGRAALRLGVTQPSVSHGLGRLRLMFRDALFVRTGTGVEPTP 89 Query: 67 LMVSMEQNLAEWMQMSNLLLDKPHHQ--TPRGLKFELAAESPLMMIMLNALSKQIYQRYP 124 + ++ + + + +LD+ F L L L + + R P Sbjct: 90 RARRLAASVDKALAILQDVLDEGARFLPDTTQRVFRLHMSDFATSAFLPTLLQVLDARAP 149 Query: 125 QATIKLRNWDYDSLD-AITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVW 183 A I+ + D L+ A+ G +D S L + + Sbjct: 150 GAVIETLHVDEPQLNVALETGRIDFALG----------HYSDASSHFQRTALLRESCVLL 199 Query: 184 LRKDHPALHQTWNLDTFL-------RYPHISICWEQSDTWALDNVLQELGRERTIAMSLP 236 + + A + D F+ +++ +D G + +LP Sbjct: 200 MSRR--AAARLALRDDFVLDANAPPNLRLVTVASHPQSMQLVD----RHGLMPRVRAALP 253 Query: 237 EFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHK 296 F + D+ ++ + + P+ WH+ Sbjct: 254 GFMAIPAILRDCDHAVIV-PRTIARTFAARD--ACATYPIA------GAQAWTVNAYWHR 304 Query: 297 RNSHNPKIVWLRETIKNLYA 316 R +P WLR + L+ Sbjct: 305 RFDADPGHRWLRALLSELFD 324 >UniRef50_B7RZL5 Transcriptional regulator, LysR family protein n=1 Tax=marine gamma proteobacterium HTCC2148 RepID=B7RZL5_9GAMM Length = 316 Score = 219 bits (560), Expect = 8e-56, Method: Composition-based stats. Identities = 75/314 (23%), Positives = 132/314 (42%), Gaps = 21/314 (6%) Query: 15 CLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSMEQN 74 LQ+L++ER+VT+AA+R++V+ A+SK+L KLR F+D LF + GL PTP + Sbjct: 2 ALQILLEERNVTRAAERLSVSQPALSKTLHKLRDSFEDELFTRTAHGLVPTPRAEELGAQ 61 Query: 75 LAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQIYQRYPQATIKLRN 132 L ++ +L + P F+L L +L L ++ + P + Sbjct: 62 LPALLESVERVLGES-DFDPLTYLGSFKLLLPPILCEALLPGLVAELDKTAPGVQVITAE 120 Query: 133 WDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPA-L 191 D + + +GE+D + I E + + P ++R HP + Sbjct: 121 ITPDYQELLKKGEIDFA----------AFVALDTERDIHAEPIATLAPRCYMRIGHPLGV 170 Query: 192 HQTWNLDTFLRYPHISICWEQ---SDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQP 248 + L FL + H+ + +T +D+VL + G R IA+ +F ++ + A+ Sbjct: 171 KKEIELQEFLAHNHLRLYLPGLTRENTSMVDDVLGQYGVHRKIALETTQFASAVGVLART 230 Query: 249 DNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVP---FTLLWHKRNSHNPKIV 305 D+LL+A A + LP + L +LL H R S + Sbjct: 231 DSLLVANAGFEASGLYSELIIG-RELPAELQRMIRNTLSSNRGKMSLLRHTRTSRSAPHQ 289 Query: 306 WLRETIKNLYASMA 319 W+R + + Sbjct: 290 WMRTLLMKHLSGPG 303 >UniRef50_A6CV60 Transcriptional regulator, LysR family protein n=1 Tax=Vibrio shilonii AK1 RepID=A6CV60_9VIBR Length = 317 Score = 219 bits (560), Expect = 9e-56, Method: Composition-based stats. Identities = 66/304 (21%), Positives = 123/304 (40%), Gaps = 22/304 (7%) Query: 20 MQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSMEQNLAEWM 79 ++ER+V++AA+++ ++ A+S++L++LRA FDDPLF GL PT + +E L + + Sbjct: 23 IKERNVSRAAEKLYLSQPAMSRTLSRLRALFDDPLFYRESNGLQPTTKTLELEPELDQIL 82 Query: 80 QMSNLLLDK-PHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQATIKLRNWDYDSL 138 + LL+ + F ++ + + L+K I + P A+++ D Sbjct: 83 LSIDALLNGLNFSPSRCERAFRISVPPLMSRFLTAPLAKAIKEVAPNASLEEYPSSLDPT 142 Query: 139 DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPAL-HQTWNL 197 + G+VD E E + S P ++ HP L QT ++ Sbjct: 143 QLLKDGQVDFSIHVEEVVQSE---------EYHCEKIGSTYPVIYGSNSHPLLDKQTISI 193 Query: 198 DTFLRYPHISIC----WEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQPDNLLL 253 L Y + + Q +D L G RTIA+ + + D L++ Sbjct: 194 KDCLEYQFVDLSLDVRSTQHYLNPIDIELANQGLSRTIALKSGQLATLMESLEDTDRLMI 253 Query: 254 ATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWLRETIKN 313 ++ Q + + L ++ K V L+ H+R +P W + + Sbjct: 254 SSH-ALAQTFEKSSNLKIIKP------FNDKPYLVSIYLIEHRRTLSSPAHKWFKTLMLE 306 Query: 314 LYAS 317 A Sbjct: 307 TLAE 310 >UniRef50_B9QU66 LysR substrate binding domain protein n=1 Tax=Labrenzia alexandrii DFL-11 RepID=B9QU66_9RHOB Length = 307 Score = 219 bits (559), Expect = 1e-55, Method: Composition-based stats. Identities = 65/286 (22%), Positives = 118/286 (41%), Gaps = 21/286 (7%) Query: 29 AKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSMEQNLAEWMQMSNLLLDK 88 A + +T SA+S++L +LR F D LF+ P G+ PT ++++ +A ++ L Sbjct: 35 AHELGLTQSAISQALKRLREVFGDELFLRRPHGMEPTATALALQAPIANAVETLRQALGV 94 Query: 89 PHHQTPRGLK--FELAAESPLMMIMLNALSKQIYQRYPQATIKLRNWD-YDSLDAITRGE 145 PR LAA +++ AL+ ++ P + + +++ ++ GE Sbjct: 95 ARAFDPRTATGQVRLAAMHAEQAVLIPALAARLRNTAPGLDLSVVPRGRREAMQSLQDGE 154 Query: 146 VDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPALHQTWNLDTFLRYPH 205 VD+ ++P EVL+ D V +L NL+T+ H Sbjct: 155 VDLALGF----------FRNVPKTCRAEVLYEDTYLVAGSPQTLSLETPLNLETYCAMDH 204 Query: 206 ISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQPDNLLLATAPRYCQYYNQ 265 I +D L++LGR+R + + LP AA + L+ R + + Sbjct: 205 ILTSPSAQLHGVVDTHLEKLGRQRRVVLGLPA-FVPALAAAAASDALITLPARVAEAFAG 263 Query: 266 LHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWLRETI 311 L PL P +++WH+RN +P+ W+R + Sbjct: 264 RFGLVTCRPPLDIP-------SFPVSVVWHRRNDSDPQTQWIRSQL 302 >UniRef50_Q486J0 Transcriptional regulator, LysR family n=4 Tax=Gammaproteobacteria RepID=Q486J0_COLP3 Length = 306 Score = 219 bits (559), Expect = 1e-55, Method: Composition-based stats. Identities = 71/325 (21%), Positives = 131/325 (40%), Gaps = 33/325 (10%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 + D +L+ +++E+S TKAAKR+ ++ SAVS+ + +L+A F D LF+ G+ P Sbjct: 1 MKHSDYSLIPTFVAIVEEKSYTKAAKRLGISQSAVSQGVTRLQAVFKDTLFIRGSRGVEP 60 Query: 65 TPLMVSMEQNLAEWMQMSNLLLDKPHHQTP--RGLKFELAAESPLMMIMLNALSKQIYQR 122 T + + LA ++ ++ + + +F +++ S +L LS + Q Sbjct: 61 TQFSLDIYPTLASSVENIAFMMPEYKKFSAVKCEKQFVISSLSVFGFTILPPLSALMSQH 120 Query: 123 YPQATIKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPC 181 P A++K+ + + + D+ S+ + +V+ D C Sbjct: 121 APLASVKIEPLNNHDFTNMLRSQHFDLVIDAH----------SNQYPQLRSKVIMEDTLC 170 Query: 182 VWLRKDHPAL-HQTWNLDTFLRYPHISICWEQSDTWAL-------DNVLQELGRERTIAM 233 V R DHP L + ++D FL H++ L D +L +R IA Sbjct: 171 VMCRIDHPRLSGDSISIDEFLAEKHVTHSQLDQKGGYLSGKGLKEDEILN----QRKIAW 226 Query: 234 SLPEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLL 293 + L + D + L R Y ++QL + D + + Sbjct: 227 QAASIMEMLPVIECCDYIAL-LPQRLVDKYRHIYQLKQLHSNFLLD-------PIKVAMY 278 Query: 294 WHKRNSHNPKIVWLRETIKNLYASM 318 WH +++P WLRE I + Sbjct: 279 WHSSRTNDPSHKWLREQIVKVTQQF 303 >UniRef50_B9K0N9 Transcriptional regulator LysR family n=1 Tax=Agrobacterium vitis S4 RepID=B9K0N9_AGRVS Length = 333 Score = 219 bits (559), Expect = 1e-55, Method: Composition-based stats. Identities = 72/305 (23%), Positives = 116/305 (38%), Gaps = 26/305 (8%) Query: 22 ERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSMEQNLAEWMQM 81 E SV++ A + VS SL +LR F DPL V S L PT +++ + + + Sbjct: 23 ECSVSRTADLLGQAQPTVSLSLKRLRDIFQDPLLVRSGSALVPTERGLALRSAMNDILGR 82 Query: 82 SNLLLDKPHHQTPR--GLKFELAAESPLMMIMLNALSKQIYQRYPQATIKLRNWDY--DS 137 + L P P F + A + L + + L I P +I D Sbjct: 83 IDTHLISPTAFDPAVSVRHFRIVASNCLGTVFMPQLIGAITDMAPGISIDASPMPSQDDL 142 Query: 138 LDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPAL---HQT 194 L ++ G +D P + L I +R H Sbjct: 143 LSGLSEGRIDAVIGNWPHPPEHLRIAPMLKTDI----------VCMVRSTHRFARRGRDR 192 Query: 195 WNLDTFLRYPHISICWEQSDT-WALDNVLQELGRERTIAMSLPEFEQSLFMAAQPDNLLL 253 LD +L H+S E+ +D L++LG +R I ++PE+ + ++ A+ D L+ Sbjct: 193 IRLDEYLEESHLSPTSERDAQFSPIDGRLRDLGVKRHIRATVPEYSIAPYVLARSD-LVF 251 Query: 254 ATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWLRETIKN 313 T + + Q ++ P+ ++ F LWH R H P WLR IK+ Sbjct: 252 TTGRHFAEQVAQTFPFAVLDAPVEL-------GQMHFYTLWHDRKHHAPDQAWLRRMIKH 304 Query: 314 LYASM 318 A M Sbjct: 305 ASAEM 309 >UniRef50_Q5YUN1 Putative transcriptional regulator n=2 Tax=Actinomycetales RepID=Q5YUN1_NOCFA Length = 314 Score = 219 bits (559), Expect = 1e-55, Method: Composition-based stats. Identities = 52/314 (16%), Positives = 102/314 (32%), Gaps = 23/314 (7%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 + LDL L L L+ ERSVT AA R+ + +S +LA+LR F D L S Sbjct: 16 LAHLDLPQLHALHALLTERSVTGAAARLQRSQPTLSSALARLRRHFRDELLTRSGNRYVL 75 Query: 65 TPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQIYQR 122 TP + A + + P +F + + + + L ++ + Sbjct: 76 TPFAEQLHPLAAVAVAAVERVFGAEAEFDPSRTHREFSIVSSDHGISVAGGPLMARLTRA 135 Query: 123 YPQATIKLRNWDYDSLDAITR--GEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 P A ++ +++ +D F R + L++D Sbjct: 136 APHARVRFIPVTTEAISREDDFYRTIDGVFMPHGYLDLPRAI-----------DLYTDRW 184 Query: 181 CVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQ 240 + D+P + + + P ++ + ++ LG + F Sbjct: 185 VCVVAADNPRVGERLTMADLRALPWVATFVDPLGRAPAWRQMELLGVVPRVCAVTESFLA 244 Query: 241 SLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 + + + L R + ++ P + + WH + Sbjct: 245 LPQLIRGTEAIAL-LQERVAKLVASGPDFRVLDCPF-------DAVPLVEAFWWHPMHDG 296 Query: 301 NPKIVWLRETIKNL 314 +P WLR + +L Sbjct: 297 DPGHAWLRGILADL 310 >UniRef50_Q7MCL9 Putative transcriptional regulator n=1 Tax=Vibrio vulnificus YJ016 RepID=Q7MCL9_VIBVY Length = 313 Score = 218 bits (556), Expect = 2e-55, Method: Composition-based stats. Identities = 66/320 (20%), Positives = 127/320 (39%), Gaps = 22/320 (6%) Query: 1 MKK-SITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSP 59 MK +DLNLL L++L +E++ AA+R+ V SAVSKSL KLR F D LF Sbjct: 1 MKDIDWHKIDLNLLKILRVLAEEQNTRLAAERLFVGQSAVSKSLGKLRELFGDELFTRER 60 Query: 60 LGLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSK 117 GLS TP +++ + + ++ LL P + +A ++ L Sbjct: 61 HGLSQTPFCIAIMPKVNQLLESFEQLLSNQETFEPATIDREICIAINPLFYRSVIPILYP 120 Query: 118 QIYQRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFS 177 ++ + P A + NW +D+ + G++D+G S+ + S++ A Sbjct: 121 RLRKEAPNAVFRFINWSWDAETKLLNGQIDVGVHFSPLDTSSQIVASNICPA-------- 172 Query: 178 DVPCVWLRKDHPALHQTWNLDTFLRYPH-ISICWEQSDT-WALDNVLQELGRERTIAMSL 235 + R+D P + + L P + + ++ + +L G E + Sbjct: 173 -DFKLCCRRDSPFAKKGYTLAQLAETPMTVLVMPSYANRLSIAEKMLVSAGLEGKVIARC 231 Query: 236 PEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWH 295 + + L + + D ++ + + L +P S+ + L Sbjct: 232 DQLDMCLSIVSSGDAVMPVCS---LIKHMLPADLTFTEIP-----SEIRLPNFHIALHTS 283 Query: 296 KRNSHNPKIVWLRETIKNLY 315 + ++ WL + I+ + Sbjct: 284 HHSQYSAIGQWLAQRIREVI 303 >UniRef50_B8K5X2 Transcription regulator, LysR family n=1 Tax=Vibrio parahaemolyticus 16 RepID=B8K5X2_VIBPA Length = 311 Score = 218 bits (556), Expect = 2e-55, Method: Composition-based stats. Identities = 63/305 (20%), Positives = 124/305 (40%), Gaps = 21/305 (6%) Query: 9 DLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLM 68 + LL L +++ +++T++AK++NVT SA+SK+L+++R F DP+ + T Sbjct: 3 NYKLLKALASVLETQNLTESAKQLNVTQSAMSKTLSQIRLEFSDPILIREGNRSVLTHRA 62 Query: 69 VSMEQNLAEWMQMSNLLLDKPHHQTPR--GLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + L P+ KF + + + +L + ++ P + Sbjct: 63 KY-LKLKLPQLLQQLDDLYLTEDIQPQKIERKFTIGFNAYVAPTILPQICAKMELESPNS 121 Query: 127 TIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRK 186 TI+ R W + D + +D+ + + +P I + L D V + Sbjct: 122 TIECRLWQTEQFDELGESSIDLV----------ATMAADIPENIYGKSLGQDQFVVMMCS 171 Query: 187 DHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAA 246 HP + + L HI + +D +L G++R + +P F ++ Sbjct: 172 QHPKANSEFGLQDLADAKHILVNGIIERREMVDALLSPTGKKRKVFAVVPSFLSAVESLK 231 Query: 247 QPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVW 306 +++A A Y + L + LP+ E + LLWH +N ++ + W Sbjct: 232 LTQAIMVAPA-HIAAMYVERFSLVVKPLPIDLPEH-------DYYLLWHAKNQNDNEHKW 283 Query: 307 LRETI 311 RE I Sbjct: 284 FRELI 288 >UniRef50_Q7MG62 Transcriptional regulator n=6 Tax=Vibrionales RepID=Q7MG62_VIBVY Length = 313 Score = 218 bits (556), Expect = 2e-55, Method: Composition-based stats. Identities = 68/324 (20%), Positives = 126/324 (38%), Gaps = 22/324 (6%) Query: 1 MKKSI-TTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSP 59 M + + + LDLNLL +L QER++ KAA+R+ ++ AVSKSL +LR F D LFV + Sbjct: 1 MARDLFSKLDLNLLRTFLILNQERNMRKAAERLFISQPAVSKSLQRLRDSFGDELFVKTY 60 Query: 60 LGLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSK 117 GL T + ++LA M +++ P + L+ + L Sbjct: 61 HGLKATEFAEQLAESLAPVMNDLMHVVNYSGGFDPSQIDRPLRIVVSPFLLTGIAQRLFT 120 Query: 118 QIYQRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFS 177 I P A I+ NW S++ I +V +G + + LP + + + Sbjct: 121 LIRAEAPHAQIQFLNWGKSSVEDIVNDKVHLGLNYA---------IERLPKEVLHTTIAK 171 Query: 178 DVPCVWLRKDHPALHQTWNLDTFLRYPH--ISICWEQSDTWALDNVLQELGRERTIAMSL 235 D ++R DHP + ++ ++ + + +LQ G + + Sbjct: 172 DTFRAYVRDDHPYKQSSARVEDGHQFEFSTLIAADWNYTQSVAEKLLQIYGHQAKVGFRS 231 Query: 236 PEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWH 295 + + D L L + + L + + P P + + +H Sbjct: 232 ELPSAVIEVTKNSDMLFLGSRYLNLDGQSGLRSIDISFGPTPLNT--------DINVYFH 283 Query: 296 KRNSHNPKIVWLRETIKNLYASMA 319 ++ +P I+WL+ + Sbjct: 284 EKYKASPTILWLKRKLAEALQEQG 307 >UniRef50_B5HPI9 Transcriptional regulator n=7 Tax=Streptomyces RepID=B5HPI9_9ACTO Length = 313 Score = 218 bits (556), Expect = 3e-55, Method: Composition-based stats. Identities = 63/319 (19%), Positives = 129/319 (40%), Gaps = 21/319 (6%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 S++ LDLNL+L L+ L++ER+VT+A +R+ ++ A+S +LA+LR FDD L + Sbjct: 1 MSLSGLDLNLVLSLRALLEERNVTRAGQRVGLSQPAMSAALARLRRHFDDDLISRAGKQY 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTP--RGLKFELAAESPLMMIMLNALSKQIY 120 T L +++ A + + P +F L + + L+++++ Sbjct: 61 ELTALGRALQDRTATACDLLERVFTSRADFAPGSEEHEFTLLTSDYALSVFGAELAQRVH 120 Query: 121 QRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 P ++ + D + S + + LF+D Sbjct: 121 AEAPGVRLRFQRTPGDVTEDTET---------LLSTADGLFMPHGVISGFPAVELFADRW 171 Query: 181 CVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQ 240 + + + + +D R P ++ ++++ L LG E + +S+ F+ Sbjct: 172 VFLVAETNDEVGDQLTMDDLARLPWVA--YQRTYDAPAARQLSMLGIEPHVEVSVDSFQA 229 Query: 241 SLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 F+ A + L R + + + + + P + + L WH ++H Sbjct: 230 LPFLVAGTRRIALV-QQRLAELLSGVAAVRRMEAP-------YGAVPLQEALWWHPVHTH 281 Query: 301 NPKIVWLRETIKNLYASMA 319 + +WLRET + A +A Sbjct: 282 DAAHIWLRETAARVGAELA 300 >UniRef50_C9NWM2 Transcriptional regulator LysR family protein n=1 Tax=Vibrio coralliilyticus ATCC BAA-450 RepID=C9NWM2_9VIBR Length = 307 Score = 217 bits (555), Expect = 3e-55, Method: Composition-based stats. Identities = 57/291 (19%), Positives = 112/291 (38%), Gaps = 19/291 (6%) Query: 21 QERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSMEQNLAEWMQ 80 Q RS+T+AA ++NVT SA+S++L+++R FDDP+ + + + L E + Sbjct: 15 QTRSLTEAALQLNVTQSAMSRTLSQIRTAFDDPILIREGKQFVVSAKGQQLLAQLPELIG 74 Query: 81 MSNLLL-DKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQATIKLRNWDYDSLD 139 + L + +F LA + L + +S ++++ P A + W ++ Sbjct: 75 ALDELYAAEEFSPHACQREFRLAYTAFLSESSVPLVSSELFKLAPNAGVNGELWQDQNVS 134 Query: 140 AITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPALHQTWNLDT 199 + +D+ L P I + L D V + H + +D Sbjct: 135 VLGDSPIDVL----------ATTLDYFPENIYGKKLLEDEYVVLMSGSHSLAQASLEMDD 184 Query: 200 FLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQPDNLLLATAPRY 259 + H+ + + + ++ R + +P F ++ + Q D L+ A Sbjct: 185 YFNASHVMVHGMREMRQYVGEQFEQRQIRRKVIARVPSFTAAMELVCQSDALVTAPL-HL 243 Query: 260 CQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWLRET 310 Y++ + LP + + LLWH + +P W RE Sbjct: 244 AGYFSNRFDYVVKPLPFDLPKH-------SYYLLWHSQYQKDPAHRWFREQ 287 >UniRef50_Q7MNI1 Transcriptional regulator n=5 Tax=Gammaproteobacteria RepID=Q7MNI1_VIBVY Length = 315 Score = 217 bits (555), Expect = 3e-55, Method: Composition-based stats. Identities = 76/320 (23%), Positives = 130/320 (40%), Gaps = 23/320 (7%) Query: 1 MKKSI-TTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSP 59 M K + +LDLNLL +L QE+++ KA+KR+ V+ A+S++L KLR F D LFV P Sbjct: 1 MAKDLFYSLDLNLLRTFMVLYQEKNMRKASKRLFVSQPAISQALQKLRHHFGDELFVKVP 60 Query: 60 LGLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTP--RGLKFELAAESPLMMIMLNALSK 117 GL TP ++ + + L++ + P ++A +M + L Sbjct: 61 TGLEATPFTETVLTAITPHLDGLASALNQTYEFNPIELSGHIKIALSPIVMASLTGTLFT 120 Query: 118 QIYQRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFS 177 Q + P TI+L W+ D+ I +G +D G + L ++P I + L Sbjct: 121 QFLTQAPNCTIELVGWNKDTFTNIQQGTIDFGVN----------LEQNIPQNISCKKLVE 170 Query: 178 DVPCVWLRKDHPALHQTWNLDTFLRYPHISICW--EQSDTWALDNVLQELGRERTIAMSL 235 + +R+DHP QT YP SI + ++++ G T+ Sbjct: 171 LTGKLIVRRDHPIDKQTVTAKDLEPYPIASIITPGWNDNFTHAAQLMEKEGATPTVGFRS 230 Query: 236 PEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWH 295 + + + + + Y L L ++ PF +H Sbjct: 231 EIILAVIDIVQHTNYFMPHSNLFPLAQYPNLRALNILVSGQPFMHG--------VFSYYH 282 Query: 296 KRNSHNPKIVWLRETIKNLY 315 RN +NP + W+ I + Sbjct: 283 SRNRNNPLMHWIHHEINTVL 302 >UniRef50_A6FDU8 Transcriptional regulator, LysR family protein n=1 Tax=Moritella sp. PE36 RepID=A6FDU8_9GAMM Length = 280 Score = 217 bits (555), Expect = 3e-55, Method: Composition-based stats. Identities = 55/309 (17%), Positives = 128/309 (41%), Gaps = 34/309 (11%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 + D+NL+ + + S+TKAA+ +NV+ A+S ++ +L + PLF+ S LSP Sbjct: 1 MHDFDMNLIKPFAKVYELNSITKAAELLNVSQPAISGAIKRLETYLGYPLFIRSGRKLSP 60 Query: 65 TPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYP 124 TP + ++ +++ + L F + A +++ + Q+ Sbjct: 61 TPNAQNFYSQVSTVLEIVDNALGNKE-------HFIVYAPESILLKLSGIHDIQL----- 108 Query: 125 QATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 I+ + + D+ + + ++D+ ++ + +E++ + + Sbjct: 109 ---IESSDSEEDTFNDLRMRKIDLAIDN----------VTQQDNSFCFELVRKEHLKLVC 155 Query: 185 RKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 K+HP + + ++ +L+ H+++ +++ A++ + + R I + + + Sbjct: 156 CKNHPTVTDSITMEHYLQLGHVAMKLVRNNMRAVEYFAKTALKARDIRVQVSSPANMMLA 215 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 D +A P + L ++ P + F L++HKR + Sbjct: 216 VQNSDY--IAAIPEGLCHIADSLGLKVIEPPF-------TMKPIDFHLIYHKRYLKDKGH 266 Query: 305 VWLRETIKN 313 LRETIKN Sbjct: 267 QQLRETIKN 275 >UniRef50_C7JF91 Transcriptional regulator LysR n=19 Tax=Alphaproteobacteria RepID=C7JF91_ACEP3 Length = 307 Score = 217 bits (555), Expect = 3e-55, Method: Composition-based stats. Identities = 74/318 (23%), Positives = 132/318 (41%), Gaps = 21/318 (6%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 + DL+LL LQ+L++E SV+ AA+R+ V+ A+S+ LAKLR F DP+ V S ++P Sbjct: 1 MKGYDLDLLRYLQVLIEEESVSLAARRLKVSEPAMSRQLAKLRKAFADPILVQSGRRMTP 60 Query: 65 TPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGL--KFELAAESPLMMIMLNALSKQIYQR 122 + + + + + ++ L++ + F L A ++ + L + + + Sbjct: 61 SAFAAGILSRVQDVVVAADSLIETRALANLANMAPTFTLRANDLVVAALALPLLEALKKD 120 Query: 123 YPQATIKLRN-WDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPC 181 PQ + D + D + G VD+ + + I + +F D Sbjct: 121 CPQCEVIWAPELDAAASDPLRDGSVDLYIGATDM----------MKPEIRRQTIFRDYMR 170 Query: 182 VWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQEL-GRERTIAMSLPEFEQ 240 +RK HP L + + +RY +IS+ +D +L+ G R IAM +P + Sbjct: 171 GLVRKGHPILAEPITPQSMVRYDYISVSRRGRAQGPIDWMLRNQYGLTRRIAMVVPNYHA 230 Query: 241 SLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 + D L+ P + L L + P + WH R Sbjct: 231 MIESMKNTD--LILPLPGIVIDHISQDALGLTSFEFPLSLPSVEA-----FQAWHPRRDM 283 Query: 301 NPKIVWLRETIKNLYASM 318 +P WLRET+ + + Sbjct: 284 DPVHRWLRETLFRVSRQV 301 >UniRef50_Q1YX76 Transcriptional regulators, LysR family protein n=1 Tax=Photobacterium profundum 3TCK RepID=Q1YX76_PHOPR Length = 309 Score = 217 bits (553), Expect = 5e-55, Method: Composition-based stats. Identities = 67/307 (21%), Positives = 122/307 (39%), Gaps = 21/307 (6%) Query: 14 LCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSMEQ 73 +L QE ++ KA++R+ V+ A+S++L KLR FDD LFV + GL PT + Sbjct: 15 RTFVILSQELNMRKASERLFVSQPAISQALLKLRNHFDDELFVKTRHGLKPTAFGEELMD 74 Query: 74 NLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQIYQRYPQATIKLR 131 ++ M + L+ P +A ++ + + L I + P + L Sbjct: 75 SINPVMDELSSTLNCSQDFDPADLNGSIRIALAPHILTYLSSKLFHAIRKDAPNVDVHLL 134 Query: 132 NWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPAL 191 NW +L+ + +GE+ IG + + P + + + D +++RKDHP Sbjct: 135 NWSPTTLEDLNKGEIAIGVNFD---------IHHAPKELIRKKVGDDTFIIYVRKDHPIN 185 Query: 192 HQTWNLDTFLRYPHI--SICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQPD 249 + + Y I S+T + V++ G I L + D Sbjct: 186 KEMISPKDVKGYEMANLIIPDWNSNTSQAERVMKSHGLSVRIGFRSELPMAVLDVVRHTD 245 Query: 250 NLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWLRE 309 + +T + +L + + K + P +H++N NP +WL + Sbjct: 246 MVYPSTTFVPERELRELRGMKV--------SIDGKDITFPIIAYYHQKNKRNPTTLWLHK 297 Query: 310 TIKNLYA 316 I NL Sbjct: 298 LINNLLQ 304 >UniRef50_C7Q333 Transcriptional regulator, LysR family n=1 Tax=Catenulispora acidiphila DSM 44928 RepID=C7Q333_CATAD Length = 313 Score = 217 bits (553), Expect = 5e-55, Method: Composition-based stats. Identities = 63/299 (21%), Positives = 114/299 (38%), Gaps = 20/299 (6%) Query: 22 ERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSMEQNLAEWMQM 81 E SV AA R++++P A+S++LA++R D + V + ++PTP +++ + + + Sbjct: 15 ENSVAAAADRLHLSPPAMSRTLARIRKATGDDILVRTGRAMTPTPHALALREETRDLVAR 74 Query: 82 SNLLLDKPHHQT--PRGLKFELAAESPLMMIMLNALSKQIYQRYPQATIKLRNWDYDSLD 139 + LL F L L+ + AL + + + P +I+ Sbjct: 75 ATALLTPVTELDLPNLERGFTLRCHDALVAALAPALIEAVAETAPNVSIRFLAEPSADAA 134 Query: 140 AITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPALHQTWNLDT 199 + RG+ D+ I + +D +R DHP Sbjct: 135 DLARGQTDLEVGAAAPQR----------PEIAAHTIGTDRMVAVMRPDHPLATGPLTPQR 184 Query: 200 FLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQPDNLLLATAPRY 259 F H++I T +D L +LG R + +LP +L + A+ L+ A + Sbjct: 185 FAEADHLTISRRGRLTGPIDEALADLGLHRRVRAALPTTSTALELTART-TLITTVAEQV 243 Query: 260 CQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWLRETIKNLYASM 318 C+ L LP VP + WH R +P WLR + + ++ Sbjct: 244 CRPAWTNLGLRARPLPFTLPA-------VPVIVAWHHRYDTDPAHSWLRTHLLAVLKTI 295 >UniRef50_A4EYL1 Transcriptional regulator, LysR family protein n=1 Tax=Roseobacter sp. SK209-2-6 RepID=A4EYL1_9RHOB Length = 324 Score = 216 bits (552), Expect = 6e-55, Method: Composition-based stats. Identities = 63/322 (19%), Positives = 127/322 (39%), Gaps = 27/322 (8%) Query: 1 MKK-SITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSP 59 M+ + + LL + E SV+KAA+++ + S +S ++ +LR+ DPLF+ + Sbjct: 1 MRDVDTSQISGRLLKVFITVFDEMSVSKAAEQLESSQSTISHNIERLRSILGDPLFLQAG 60 Query: 60 LGLSPTPLMVSMEQNLAEWMQMSNLLLD-KPHHQTPRGLKFELAAESPLMMIMLNALSKQ 118 G+ P+ + + + L D + +A+ + L+ L Q Sbjct: 61 RGIVPSERAEFLAPKIRHLLTDLESLADNDGYDPLVDTTPVRIASNGSTVAPQLDRLRTQ 120 Query: 119 IYQRYPQATIKLRNW-DYDSLDA-ITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLF 176 ++ + P + R D+L++ + RG D+ + R P + LF Sbjct: 121 LWSKVPGRQLIFRELGSRDNLESVLHRGAADLAIAARPI---------RYPELLQCRPLF 171 Query: 177 SDVPCVWLRKDHPALHQTW-NLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSL 235 + ++ PA +++ + PH ++ + S ++ L+ LG R IA+S+ Sbjct: 172 ATHSVIFYD---PAERGPIESIEDYCTAPHATLDFGGSIKSVVETALESLGLSRNIAISV 228 Query: 236 PEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWH 295 P + + L+ T P P+ + F L+WH Sbjct: 229 PNVWFLAQVLKGTN--LITTLPGLLANTAFSEFSQCK-FPISLP-------PIDFDLVWH 278 Query: 296 KRNSHNPKIVWLRETIKNLYAS 317 +RN ++P+ +WLR + Sbjct: 279 RRNQNSPRHIWLRREAASALQQ 300 >UniRef50_Q097I8 Regulatory protein, LysR:LysR, substrate-binding n=1 Tax=Stigmatella aurantiaca DW4/3-1 RepID=Q097I8_STIAU Length = 289 Score = 216 bits (551), Expect = 8e-55, Method: Composition-based stats. Identities = 59/280 (21%), Positives = 115/280 (41%), Gaps = 20/280 (7%) Query: 39 VSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG-- 96 +S++L ++R DP+FV + GL PTP +++ + + ++ + LL ++PR Sbjct: 1 MSRTLTRIRKSLGDPVFVRAGHGLVPTPRALALREKVRALVEDATALLSPDTPRSPRDMV 60 Query: 97 LKFELAAESPLMMIMLNALSKQIYQRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESH 156 + ++ + L K++ + P T++ + + A+ G+VD+ Sbjct: 61 RTLSIRVNDGVIPGLGVELVKRVREEAPGLTLRFVAEGEEDVSALRDGDVDLDIG----- 115 Query: 157 PRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTW 216 + +L I + L+ D V + P L+ F H+ + Sbjct: 116 -----VQGALGPEIRTQRLYVDAYAVLVGTKTPLARGRLTLERFAHAEHVVVSRRGKIRT 170 Query: 217 ALDNVLQELGRERTIAMSLPEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPL 276 A+D +L++ G R + + +P + + AQ L + + +L + A+PL Sbjct: 171 AMDVLLEQHGLRRRVTVVVPNGLAAAALVAQTGALTVVPL-VFASAVTKLMPVRPRAVPL 229 Query: 277 PFDESQQKKLEVPFTLLWHKRNSHNPKIVWLRETIKNLYA 316 D + WH R H P VWLR T+K L + Sbjct: 230 ALDA-------IFIAQAWHPRFDHEPAHVWLRRTVKELAS 262 >UniRef50_C4LDS5 Transcriptional regulator, LysR family n=1 Tax=Tolumonas auensis DSM 9187 RepID=C4LDS5_TOLAT Length = 317 Score = 216 bits (551), Expect = 9e-55, Method: Composition-based stats. Identities = 66/318 (20%), Positives = 124/318 (38%), Gaps = 20/318 (6%) Query: 3 KSITTLDLNLLLCLQLLM-QERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLG 61 + DLNLL+ L+ L ++ +V++AA R+ ++ SA+S +L +LR DDPLFV Sbjct: 14 QQFRHWDLNLLVVLEALFCEQGNVSRAALRVGLSQSAMSHALNRLREMLDDPLFVKQGHR 73 Query: 62 LSPTPLMVSMEQNLAEWMQMSNLLLDKP-HHQTPRGLKFELAAESPLMMIMLNALSKQIY 120 + PT +++ +A W++ L P + +A L ++L AL + Sbjct: 74 MHPTSRAIALAPVIAGWLENIRGQLKPPVFDPATVQQEINVAIPEHLERLVLPALLGFLR 133 Query: 121 QRYPQATIKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 Q+ P + R L +A +G +D+ G + P+ + + +L Sbjct: 134 QQAPGLHLHSRPVPMSQLNEAFAQGRIDMAIIGNDWEPK---------ASYQHCLLTESR 184 Query: 180 PCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFE 239 ++ +L P ++ + +DN G R I + Sbjct: 185 FVYVYDARQLHFAESVSLAELAAVPQLASNYSHKTATIIDNHFTVHGLTRRIMATSGGIT 244 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 + A+ +L+ P + L LV P + L+WHK + Sbjct: 245 AIPAILAE--CPMLSILPEIMIADHPLFD-SLVKRPFE-----PDSVRATLHLVWHKLHE 296 Query: 300 HNPKIVWLRETIKNLYAS 317 H+ ++R+ I +A Sbjct: 297 HDLVQHFVRDWIIRHFAG 314 >UniRef50_A5IDS9 Transcriptional regulator, LysR family n=5 Tax=Legionella RepID=A5IDS9_LEGPC Length = 304 Score = 216 bits (551), Expect = 9e-55, Method: Composition-based stats. Identities = 70/299 (23%), Positives = 124/299 (41%), Gaps = 25/299 (8%) Query: 22 ERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSMEQNLAEWMQM 81 E SV+KAA++ ++ +A+S L +LR FDDPLF+ P GL PT + + + +++ Sbjct: 20 ELSVSKAAEKSFMSQTAMSHILKQLRDIFDDPLFIRKPHGLQPTQKALDLAPKIKKFLNY 79 Query: 82 SNLLLDKPHHQTPRGLKFEL--AAESPLMMIMLNALSKQIYQRYPQATIKLRNWDYD-SL 138 SN + ++ P L A+ +L L + + P+ +K+ + SL Sbjct: 80 SNDIFEE-DTFNPGNDNLFLKTASVGTGEYFILPRLCAHLAKNAPKFVLKISSLSEYLSL 138 Query: 139 DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPALHQTWNLD 198 + + E+D I E+LF + + K HP +Q D Sbjct: 139 EYLLMSELDFAIGPG---------FVETGNNIIRELLFEEEAVCVMHKSHPLANQELTQD 189 Query: 199 TFLRYPHISICWEQ-SDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQPDNLLLATAP 257 +L+ H+ I + + L LQ +R I + +P +L + + + T P Sbjct: 190 MYLQAEHVDIQFSYMGNENILYKALQGY-HQRNIKVIVPNIISALEVVYHTN--FITTVP 246 Query: 258 R-YCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWLRETIKNLY 315 R + +Q+ L LP P K +HKR S++ + W+ + IK Sbjct: 247 RTLAVTFKDRYQIELHPLPFP-------KKTFLVNFYYHKRLSNHKPLQWVLDVIKKYC 298 >UniRef50_C9YZ14 LysR-family transcriptional regulator n=2 Tax=Streptomyces scabiei 87.22 RepID=C9YZ14_STRSW Length = 307 Score = 216 bits (551), Expect = 9e-55, Method: Composition-based stats. Identities = 57/313 (18%), Positives = 106/313 (33%), Gaps = 21/313 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 LDLNLL+ L L+QERSVT+AA+R+ ++ ++S +LA+LR + D L V TPL Sbjct: 6 LDLNLLVPLDALLQERSVTRAAQRLGLSQPSLSAALARLRRHYGDELLVRVGNSYELTPL 65 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRGLK--FELAAESPLMMIMLNALSKQIYQRYPQ 125 + ++ + + ++ L + F + + AL+ + P Sbjct: 66 AERLVEHTEQALGWADRALRTRPDFDSAQARHEFTVIMADCQLPTFGRALADLVRTAAPN 125 Query: 126 ATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 ++ ++ + + L + I L+ D + Sbjct: 126 VRLRFQHSTERVVQQALD---------NLRTVDALVLPQGILSNIPTFDLYKDRWVCVVS 176 Query: 186 KDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMA 245 D + P + S ++ N L G E + F + Sbjct: 177 AD--RAPAVLGREELAERPWVLPYRHPSPVFSPLNRLHAEGIEPHAEIVTENFLAIPHLV 234 Query: 246 AQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIV 305 A D + P Q P+ + + + +L WH + P + Sbjct: 235 AGTDR--IGLMPERVAIPALSGQ------PVTVVQPDFEIGHLVESLWWHPLHEREPAHI 286 Query: 306 WLRETIKNLYASM 318 WLR ++ Sbjct: 287 WLRRIAAQAGQAV 299 >UniRef50_Q1Z8G0 Probable transcription regulator protein n=1 Tax=Photobacterium profundum 3TCK RepID=Q1Z8G0_PHOPR Length = 317 Score = 215 bits (549), Expect = 1e-54, Method: Composition-based stats. Identities = 73/311 (23%), Positives = 127/311 (40%), Gaps = 21/311 (6%) Query: 9 DLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLM 68 + LL L L++ +SVT++A +NVT SA+SK+L +R F DP+ V T Sbjct: 11 NYKLLPALASLLETQSVTESADNLNVTQSAMSKTLKHIRDTFHDPILVREGNTYILTRRG 70 Query: 69 VSMEQNLAEWMQMSNLL-LDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQAT 127 + ++Q L + +Q + L L + +F L+ + + M+ L K+I PQA+ Sbjct: 71 IQLKQQLPDLLQQLDALYLPQAFVLAHSQRQFSLSYSAFVSPTMIPQLCKKIATLAPQAS 130 Query: 128 IKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKD 187 I W SLD + + D+ S+P + + + D V Sbjct: 131 INCTLWQNQSLDNLAKQPFDLV----------ATTALSVPDNLHGKKIIDDNYVVVCCHT 180 Query: 188 HPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQ 247 QT ++ + HI + +D+ L + + R + +P+FE + Sbjct: 181 QSITQQTMTIEHYTSAKHILVNGIVDPRREVDSALSQQDKTRDVFAIVPDFEMAFATLQH 240 Query: 248 PDNLLLATAPR-YCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVW 306 +AT P Y + +QL L LP + LLWH ++ H+P+ W Sbjct: 241 T--PAIATVPLNIAAQYAEQYQLNLFLLPFHLP-------PHSYYLLWHSKHVHDPEHQW 291 Query: 307 LRETIKNLYAS 317 R+ + Sbjct: 292 FRKLCFDYLKE 302 >UniRef50_Q1V9Y1 Transcriptional regulator, LysR family protein n=8 Tax=Vibrionales RepID=Q1V9Y1_VIBAL Length = 317 Score = 215 bits (549), Expect = 1e-54, Method: Composition-based stats. Identities = 68/318 (21%), Positives = 128/318 (40%), Gaps = 22/318 (6%) Query: 4 SITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLS 63 +++ +DLNLL L+ L++E+ V+ A +N++ SAVS++L K+R +F+D L V G Sbjct: 7 NLSQIDLNLLFILKHLLEEKHVSNTAMALNMSQSAVSRALQKMRVFFNDELLVRKKYGYE 66 Query: 64 PTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQIYQ 121 TP + Q++ + L P ++ P + ++ + +I Q Sbjct: 67 LTPKAELVRQDINNVITSLEK-LAHRDSFDPSTVSSTVKVYGLLPQINTLMPKVIAKIRQ 125 Query: 122 RYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPC 181 P + L + DA+ G+V S + + I V+ Sbjct: 126 EAPNLKVSLDSAPKRHFDALVAGDVHFALSSHQPPSSEQ--------NIYRMVVAKRTFR 177 Query: 182 VWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGR----ERTIA-MSLP 236 + + + HP + + + + + ++ QELG +R A + L Sbjct: 178 LLMNRYHPLADLELTPERLAEFDFGQVSLQGEKRLSFEHKYQELGLANKKKRLSAPVQLN 237 Query: 237 EFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHK 296 F + +AA+ + + P + + Q +L + +P Q L WHK Sbjct: 238 NFSSAPSIAAETEIIFHLPTP-FAEAACQDPRLIVREVPAELQLDFQ-----EVFLYWHK 291 Query: 297 RNSHNPKIVWLRETIKNL 314 R + +P W+RE K L Sbjct: 292 RFNDDPMCEWVREIFKQL 309 >UniRef50_B0SY67 Transcriptional regulator, LysR family n=1 Tax=Caulobacter sp. K31 RepID=B0SY67_CAUSK Length = 322 Score = 215 bits (549), Expect = 2e-54, Method: Composition-based stats. Identities = 70/342 (20%), Positives = 121/342 (35%), Gaps = 44/342 (12%) Query: 1 MKK-SITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSP 59 M LDLNLL L++E S T+A ++ +T SAVS +L +LR D LFV P Sbjct: 1 MNDVHFKNLDLNLLRVFDALLEEESATRAGSKLGLTQSAVSHALGRLRLSLGDELFVRGP 60 Query: 60 LGLSPTPLMVSMEQNLAEWMQMSNLLLD-KPHHQTPRGLKFELAAESPLMMIMLNALSKQ 118 GL TP V M + + +++ + F + A + L +++ + ++ Sbjct: 61 AGLQATPRAVEMGRPIRAALKLMETAVTVPHFDPAADERVFHVGASAYLCSVLMPGVVRR 120 Query: 119 IYQRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSD 178 I P +++R + + + G +D+ G E Y LF + Sbjct: 121 IQTEAPGVKLRIRGVEGALAEDLDHGRLDLVIGGFEHVA----------PRFAYTPLFKE 170 Query: 179 VPCVWLRKDHPALH----QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIA-- 232 +R DHPA P + + A +ELG R + Sbjct: 171 TGVWVIRADHPAARAAGAGEITPRILAGIPCLVVSAGHEVEEARRGSRRELGLRRITSWS 230 Query: 233 --------------MSLPEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPF 278 +++P+ +L M +Q D + A PR ++ P Sbjct: 231 DDYALSSTGGLDGPVTVPDASSALVMVSQTD--MAALLPRRLATLAAERGAVVMVEPGRH 288 Query: 279 DESQQKKLEVPFTLLWHKRNSHNPK--IVWLRETIKNLYASM 318 E Q + R + + WL + + A + Sbjct: 289 PEPAQFGAVI--------RGGESEAGPVAWLLRLVTEVAAGL 322 >UniRef50_Q16B23 Transcriptional regulator, LysR family, putative n=2 Tax=Roseobacter RepID=Q16B23_ROSDO Length = 304 Score = 215 bits (549), Expect = 2e-54, Method: Composition-based stats. Identities = 65/320 (20%), Positives = 126/320 (39%), Gaps = 25/320 (7%) Query: 1 MKK-SITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSP 59 MK + ++D LL + QE+SVTKAA + + S +S SL KLR DPLFV S Sbjct: 1 MKNFDVLSIDGKLLKVFLTVFQEKSVTKAACALGTSQSTISHSLEKLRHCVGDPLFVKSG 60 Query: 60 LGLSPTPLMVSMEQNLAEWMQMSNL-LLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQ 118 G++PT + ++ + + + + + ++ +L + + Sbjct: 61 RGIAPTNVAAALAPKVCRIISELEGLAMQSEYCPRQDTTTLTITTNVTELLPVLIPVKQA 120 Query: 119 IYQRYPQATIKLRNWDY--DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLF 176 I Q P TI+ + ++L + G D+ + + PL + + + Sbjct: 121 IRQAAPDVTIRFTDLGARTNALSVLANGLADVAITAS---------IGPYPLELAIDQYY 171 Query: 177 SDVPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLP 236 D + + ++ + + H + + + +D L+ G+ R I ++ Sbjct: 172 KDDFVCYFDCEQRNAPD--TVEAYGKARHAVLDFGGATKSIVDAALENAGQTREIHLAAA 229 Query: 237 EFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHK 296 +A+ D L+AT P+ + V P P V + L+WH+ Sbjct: 230 NSYALAKLASGTD--LVATLPKRLRATAFK-GFAYVTPPFPLP-------PVTYDLVWHR 279 Query: 297 RNSHNPKIVWLRETIKNLYA 316 R + + WLR+T+ + Sbjct: 280 RTLDSSRHKWLRQTMMAAIS 299 >UniRef50_Q7MEL0 Transcriptional regulator n=18 Tax=Gammaproteobacteria RepID=Q7MEL0_VIBVY Length = 289 Score = 214 bits (547), Expect = 3e-54, Method: Composition-based stats. Identities = 56/307 (18%), Positives = 118/307 (38%), Gaps = 33/307 (10%) Query: 6 TTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPT 65 +DLNL+ L+ + +S TKAA + +T AVS S+ +L + LFV G+ PT Sbjct: 3 NAMDLNLIQTFLLVAEYQSYTKAADHLGLTQPAVSASIKRLEKVVNKQLFVKKGRGIEPT 62 Query: 66 PLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQ 125 + + + + + + + F++ L+ + + ++ P Sbjct: 63 ASAYQLIPKFHQAISIVDNAISERSA-------FQVCCSETLLHSLTP-IEHTVFHESP- 113 Query: 126 ATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 Y + I + ++D+ + S + ++ + + V R Sbjct: 114 ------PEKYLLFEQIRQQKMDLIIDTVITKDSSFVIENA----------YQEPAVVICR 157 Query: 186 KDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMA 245 + HP + + F + H + ++T + + E ER + + Sbjct: 158 QGHPRIQGQLSKAQFYQESHCLFSGKWNNTTGFEQLANEPIEERIVEIVTTSLSSMALYV 217 Query: 246 AQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIV 305 AQ D L + + + +++ +L ++ P+ +P+ ++HKR +NP Sbjct: 218 AQRDCLGVV-SRSFALKWSKALKLQILDCPIAISL-------IPYKFIYHKRELNNPAHQ 269 Query: 306 WLRETIK 312 LRE IK Sbjct: 270 RLREKIK 276 >UniRef50_A6E126 Transcriptional regulator, LysR family protein n=1 Tax=Roseovarius sp. TM1035 RepID=A6E126_9RHOB Length = 293 Score = 214 bits (546), Expect = 4e-54, Method: Composition-based stats. Identities = 68/324 (20%), Positives = 114/324 (35%), Gaps = 42/324 (12%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 + D+NLL L L+ RS T A +++ ++ SAVS +L +LR +DPLF+ L Sbjct: 1 MDFSKFDMNLLRVLDALLITRSTTVAGQQVGLSQSAVSSALGRLRVALNDPLFLREGRHL 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPR--GLKFELAAESPLMMIMLNALSKQIY 120 PT S+ Q + + + LL +P P F + +L L + Sbjct: 61 VPTDYAQSLAQPVRAILAETEALLTRPTSFEPARSERHFHILGAEFWGAHLLPELMAHLA 120 Query: 121 QRYPQATIKLRNWD-YDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 P T+ D +A+ D+ + LP + L+ Sbjct: 121 SVAPGVTLYCATMSGPDPSEALLLKRADLALCP----------MCDLPDWAAAQPLYRAG 170 Query: 180 PCVWLRKDHPAL-------HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIA 232 + R+DHP L T D P Sbjct: 171 QVLLARQDHPRLVAAGLAPGDTVPSDLLAELPRADCGANPGQKAG------------RTV 218 Query: 233 MSLPEFEQSLFMAAQPDNLLLATAPR-YCQYYNQLHQLPLVALPLPFDESQQKKLEVPFT 291 ++LP+ M ++ L++ PR + L + ALP P + Sbjct: 219 VTLPDVHTLAAMLSRT--PLVSILPRPLAVHLVTGQGLAVYALPEPIAVT-------DVA 269 Query: 292 LLWHKRNSHNPKIVWLRETIKNLY 315 ++WH R+ ++P WLRE + + Sbjct: 270 MVWHVRSQNDPAHRWLRERLADTL 293 >UniRef50_B7VU21 Transcriptional regulators, LysR family n=1 Tax=Vibrio splendidus LGP32 RepID=B7VU21_VIBSL Length = 309 Score = 213 bits (543), Expect = 7e-54, Method: Composition-based stats. Identities = 77/322 (23%), Positives = 131/322 (40%), Gaps = 25/322 (7%) Query: 1 MKKSI-TTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSP 59 M K LDLNLL ++ QE+++ KA+ R++V+ A+SKSL +LR FDD LF+ P Sbjct: 1 MAKDFYNNLDLNLLRTFLVIYQEKNLQKASTRLHVSAPALSKSLNRLRHHFDDQLFLKVP 60 Query: 60 LGLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSK 117 GLSPTP ++ Q +A N + P K +A L+ + L Sbjct: 61 RGLSPTPFSDNLAQKIAPTFDTLNNNIKSLQEFAPSDLNGKLTIAISPFLLHAIGKDLFT 120 Query: 118 QIYQRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFS 177 +I+Q+ P + L NW SL+ I+ G +G + R I + + Sbjct: 121 EIHQQAPNVELHLVNWSKSSLEDISIGTSKLGINYDLPLSR---------KDIACQFITK 171 Query: 178 DVPCVWLRKDHPALHQTWNLDTFLRYPHISICW--EQSDTWALDNVLQELG--RERTIAM 233 D V++RKDHP + YP ++ + +++E+ + I Sbjct: 172 DQFRVYVRKDHP-IQDRIEFSDVQNYPIATLIAADWNLKESFAEKIIREVDITLQPNIVF 230 Query: 234 SLPEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLL 293 L ++ + L +T + + Y L L ++ L + Sbjct: 231 RSELPSAILETISETNILFPSTGYIHIERYPNLKALS--------PIDTEQNLVKDILVY 282 Query: 294 WHKRNSHNPKIVWLRETIKNLY 315 + ++ ++P WL I L Sbjct: 283 YPIKDKNDPTQQWLLSIITQLL 304 >UniRef50_C4XHV5 Putative uncharacterized protein n=2 Tax=Desulfovibrio magneticus RS-1 RepID=C4XHV5_DESMR Length = 306 Score = 211 bits (539), Expect = 2e-53, Method: Composition-based stats. Identities = 52/299 (17%), Positives = 126/299 (42%), Gaps = 24/299 (8%) Query: 21 QERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSP----LGLSPTPLMVSMEQNLA 76 +++ V++AA+ +V+ S++SK L K R F D L V G T +++ ++L Sbjct: 22 EQKHVSRAAEVADVSQSSMSKVLLKARNIFGDDLLVRDGSGGRKGYRLTACALNLLKSLQ 81 Query: 77 -EWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQATIKLRNWDY 135 + + + NL + F+++A M L + +++ + P + L + Sbjct: 82 NQLIPLMNLDSIRTFDPAESRRCFKVSASEMEAMYFLPNIMQKMIESGPGLSFNLFQTNN 141 Query: 136 DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPALHQTW 195 +++ +++ E+D ++S+P ++LF + + K++ Sbjct: 142 YTMELLSKNELD-----------CSFWITSVPQGFSNKLLFDEKMVCLVSKNNFFKGDAL 190 Query: 196 NLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQPDNLLLAT 255 +LD ++ + H+ ++ +D+ L +LG R I + F S +A++ + L+ + Sbjct: 191 SLDDYVSFGHVRTYHPGVNSSFIDDYLNKLGLSRKIVVMSHSFFTSASIASKTN-LIASV 249 Query: 256 APRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWLRETIKNL 314 + + +V P+ L+W+K +P + W + + ++ Sbjct: 250 PEKVAKILADFSGARIVDAPVELPT-------FGLYLIWNKLMDTDPGLGWFIQQLLDV 301 >UniRef50_B8K3C7 Putative uncharacterized protein n=1 Tax=Vibrio parahaemolyticus 16 RepID=B8K3C7_VIBPA Length = 322 Score = 211 bits (539), Expect = 2e-53, Method: Composition-based stats. Identities = 67/325 (20%), Positives = 126/325 (38%), Gaps = 22/325 (6%) Query: 2 KKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLG 61 + I +D+ L L+ L++E+ V+ A +N + S+VS++L K+R +FDD L V S G Sbjct: 10 RMQIPQVDVTSLYILKYLLEEKHVSNTALLLNTSQSSVSRALQKMRVFFDDELLVRSSFG 69 Query: 62 LSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPR--GLKFELAAESPLMMIMLNALSKQI 119 T ++++++ + L + P P + ++ L I Sbjct: 70 YELTSKAEVIKKDISSLIISLEK-LSNTNSFEPSKVEGTLRFYGLQPQINTIMPRLVAAI 128 Query: 120 YQRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 +R P + + + + G+V S + + I + + Sbjct: 129 RERAPNLVVSIDTTPKRHFEDLVSGDVHFSLSSHQP--------PTSENTIYRKAIAKRD 180 Query: 180 PCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGR----ERTIA-MS 234 + + ++HP Q + I + T + ++ ELG +R A + Sbjct: 181 FRLLMSRNHPLAEQELTAEKLCNCHFGQISLQGEKTLSFEHKFIELGLANKKQRLSAPVQ 240 Query: 235 LPEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLW 294 L F + +AA+ D + P + + Q +L +P P + L W Sbjct: 241 LTNFTSAPSIAAETDIIFHLPTP-FAEAACQDERLITREVPEPLRLDFSQ-----VYLYW 294 Query: 295 HKRNSHNPKIVWLRETIKNLYASMA 319 HKR +P VW+RE I L+ A Sbjct: 295 HKRFHDDPMCVWVRELINELFDEEA 319 >UniRef50_B7VQM7 Transcriptional regulators, LysR family protein n=3 Tax=Vibrio RepID=B7VQM7_VIBSL Length = 308 Score = 211 bits (538), Expect = 3e-53, Method: Composition-based stats. Identities = 65/318 (20%), Positives = 127/318 (39%), Gaps = 21/318 (6%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 + +DLNLL ++ QE+S+ KAA+++ V+ AVS+S+ KL+ + LFV S Sbjct: 1 MKLNNVDLNLLKVFVVVYQEKSLRKAAEKLFVSTPAVSQSVKKLKESLGEELFVLSNKQF 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGLK--FELAAESPLMMIMLNALSKQIY 120 PTP + + + + +++ TP L F++ A L+ + +L Q+ Sbjct: 61 LPTPYSDELYRRVFPLLDGLVTAIEEGKQFTPAELSEDFKIEANPHLLPWLTPSLFHQLS 120 Query: 121 QRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 P + + DSL+ + E+D +LP I L + Sbjct: 121 DESPLSRLISHTSSQDSLERLKSDEIDFVIHFEAE---------NLPAEIIAVPLVTLKF 171 Query: 181 CVWLRKDHPALHQTWNLDTFLRYPHISIC---WEQSDTWALDNVLQELGRERTIAMSLPE 237 + +R DHP +D L +P + ++Q+ L+ + G+ +A+ Sbjct: 172 VLAVRVDHPFKEDVAQIDDLLSFPFAHVDLAYFDQNKHSRLEEEVLSQGKSINMALRTTS 231 Query: 238 FEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKR 297 + + + P Q+ L + + + ++ ++ HK+ Sbjct: 232 VVGLIETIKHSNMIAPCMPPVIEQHKGVLRSIVI-------EGLEEDAEKMEVFAYLHKK 284 Query: 298 NSHNPKIVWLRETIKNLY 315 N H+ K WL + I+ Sbjct: 285 NQHSAKYKWLLDLIETAM 302 >UniRef50_A7IHY6 Transcriptional regulator, LysR family n=1 Tax=Xanthobacter autotrophicus Py2 RepID=A7IHY6_XANP2 Length = 303 Score = 211 bits (538), Expect = 3e-53, Method: Composition-based stats. Identities = 58/320 (18%), Positives = 119/320 (37%), Gaps = 21/320 (6%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 LDLNL++ L++ +V++ A+++++T VS +LA+LR FDD LFV L Sbjct: 1 MRFERLDLNLIVLFDSLLKSENVSRTARQLHLTQPTVSNALARLRRHFDDELFVMVGRKL 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQIY 120 PTPL + + + +A+++ +S ++ K P F + A + ++L + +++ Sbjct: 61 EPTPLAIDLREPVAKFIHLSRVIAQKRSVFDPETTERTFSIVASDYIASVLLTRVGRRLV 120 Query: 121 QRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 ++ ++ +G D + + + LF+D Sbjct: 121 SATSHVNLRHVPISAAAIQKFLQGTYDFLVAPGYVYQNWPN----------TKFLFADRF 170 Query: 181 CVWLRKDHPALHQTWNLDTFLRYPHISICWEQ-SDTWALDNVLQELGRERTIAMSLPEFE 239 V +D+ + LD FL +P + S ++ L + E + + F Sbjct: 171 VVIACRDNTEVGSQLTLDEFLNHPLAVCRFGDLSQPSVVEEFLMKHDCEHSARVECESFG 230 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 + P ++ + P+ + +LWH + Sbjct: 231 LLVDYIVGT--------PMLASLPLSYARMRVQRSPIRLVTPMFDMPVIRQQILWHGYSE 282 Query: 300 HNPKIVWLRETIKNLYASMA 319 P E I+ A + Sbjct: 283 SEPAARLALEMIEQEAADLG 302 >UniRef50_B5ET44 Transcriptional regulator n=1 Tax=Vibrio fischeri MJ11 RepID=B5ET44_VIBFM Length = 301 Score = 211 bits (538), Expect = 3e-53, Method: Composition-based stats. Identities = 58/321 (18%), Positives = 118/321 (36%), Gaps = 30/321 (9%) Query: 1 MKKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPL 60 M K D+NLL + Q S TKA++ + +T S+VS ++ +L+ + LF S Sbjct: 1 MSKQ-KDFDMNLLRVFVSVCQTGSFTKASEELELTQSSVSNAIRRLKKALGNELFTRSGR 59 Query: 61 GLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTP--RGLKFELAAESPLMMIMLNALSKQ 118 G+ T + + + + + P F + + +L L + Sbjct: 60 GIEMTAFGKHFFEAVEPSVMSLVNTIGRDDRFEPLTSSRNFIV----YALESVLPRLQIR 115 Query: 119 IYQRYPQATI-----KLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYE 173 + + + I +L + + ++ DA+ R +VD+ + H S + Sbjct: 116 LRELLKGSNITVTLKELPSNEEETFDALMREKVDLVLDVMKPHQSS----------LKSV 165 Query: 174 VLFSDVPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAM 233 ++ D C R HP + + + H + + ++ + +E +RT+ Sbjct: 166 IVSEDAACCIARIGHPRIFGEMTHEQYFNEDHAFLNMRRVKQTIMEYLAKEELPKRTMGS 225 Query: 234 SLPEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLL 293 + AQ D + + + R Y + +L ++ LP ++ Sbjct: 226 EHTSMLGMMACVAQSDFVGVNSV-RLVSQYKEQFKLQMLPLPF-------STRTTSIHMI 277 Query: 294 WHKRNSHNPKIVWLRETIKNL 314 W ++ N WLRE I Sbjct: 278 WSVKSQSNSANQWLRELIIAA 298 >UniRef50_A8H681 Transcriptional regulator, LysR family n=2 Tax=Gammaproteobacteria RepID=A8H681_SHEPA Length = 300 Score = 210 bits (536), Expect = 5e-53, Method: Composition-based stats. Identities = 62/324 (19%), Positives = 121/324 (37%), Gaps = 37/324 (11%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 DLNLL +M+ S K ++ + ++P AVS ++ +L+ + LFV + Sbjct: 1 MIFDKFDLNLLKVFSKVMETGSYVKTSEALGISPPAVSIAMKRLQKSLEKELFVRGGGQI 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTP--RGLKFELAAESPLMMIMLNALSKQ-- 118 PT ++ QN+ + ++ P F L +L+A + + Sbjct: 61 QPTAAAKALYQNVRFELLSIETVISAFGQFDPHVSKAHFSLMGPEEYNAKLLSAFAGEQN 120 Query: 119 ------IYQRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDY 172 + Q+ + D +++ ++ D+ S I+ Sbjct: 121 NGLTYSLMQQA--------STDEEAIASLRTRMTDLVIDSVVLADSS----------IES 162 Query: 173 EVLFSDVPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQ-ELGRERTI 231 E+LF D + K + + + + + P + +S AL+ L+ +L R I Sbjct: 163 ELLFEDRIVLIAAKSNSTIDENLTFEQYQELPQSVLSLRRSGKLALEMFLEDKLEVRRNI 222 Query: 232 AMSLPEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFT 291 + ++ + +Q L R +Y + L ++ P+ VP Sbjct: 223 SHEASSIMANILIVSQT-MLFCHVPLRLAIHYQEQLSLKIIEPPISL-------KPVPVI 274 Query: 292 LLWHKRNSHNPKIVWLRETIKNLY 315 + WHK NS +P +WLR IK + Sbjct: 275 MQWHKSNSIDPSHIWLRNRIKQIL 298 >UniRef50_Q930K8 Transcriptional regulator, LysR family n=2 Tax=Alphaproteobacteria RepID=Q930K8_RHIME Length = 295 Score = 210 bits (536), Expect = 6e-53, Method: Composition-based stats. Identities = 54/298 (18%), Positives = 109/298 (36%), Gaps = 25/298 (8%) Query: 22 ERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSMEQNLAEWMQM 81 E V++AA R+ ++ A S +L + R F D L + T ++ L + Sbjct: 20 EAHVSRAADRLGLSQPAASAALQRCRHLFRDELLERGRGTMRLTSRAEALRAPLKSLLAS 79 Query: 82 SNLLLDKPHHQTPRGLKF-ELAAESPLMMIMLNALSKQIYQRYPQATIKLRNW--DYDSL 138 L+ P + + + ++ L +++ P + +++W + Sbjct: 80 MMELIGPPEIPLTEIRQVLRITMADYPALFVIAQLQRELQPSAPGIDLVIQSWHGGDAAR 139 Query: 139 DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPALHQTWNLD 198 A+ G D+ S + ++ + E L ++ V +R HPA + ++L+ Sbjct: 140 SALVDGTADLAVS----------VFTAPDDDLHREELLTEHYVVVMRAGHPAA-EAFDLN 188 Query: 199 TFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQPDNLLLATAPR 258 +L YPHI + T LD L G R + + +P F+ + D ++A P Sbjct: 189 AWLSYPHILVSGRGDTTTPLDAELSRFGLSRRVGLVVPNFQMVPSLLQDSD--MIAMLPS 246 Query: 259 YCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWLRETIKNLYA 316 L P+P + WH+R + + + + + L Sbjct: 247 RAT--PSGGSLVSFLPPIPVP-------GFQLHMAWHRRRAKDAALQHVARILGALLR 295 >UniRef50_A9BQF2 Transcriptional regulator, LysR family n=8 Tax=Proteobacteria RepID=A9BQF2_DELAS Length = 339 Score = 209 bits (534), Expect = 7e-53, Method: Composition-based stats. Identities = 72/299 (24%), Positives = 121/299 (40%), Gaps = 25/299 (8%) Query: 21 QERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSMEQNLAEWMQ 80 + SVT AA+R+ VT SAVS L KLRA D LFV G++PT ++++ E ++ Sbjct: 25 ETGSVTAAAQRLGVTQSAVSHLLDKLRAITGDRLFVRQGRGIAPTAHALALQDPARELLR 84 Query: 81 MSNLLLDKPHHQTPR--GLKFELAAESPLMMIMLNALSKQIYQRYPQATIKLRNWDYDSL 138 + P + +AA ++L AL++++ + P A +++ + Sbjct: 85 QMQQ-FGQGPSFDPAHWRAEITIAANDLQRELLLPALARRLRTQAPAAMLRVIDSGAPDA 143 Query: 139 DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPALHQTWNLD 198 + + + S R I + LF+D V+ D +L Sbjct: 144 ELLRSDACLLAISPRPPDA----------TDIVQKRLFTDEYAVFY--DSAVRQPPASLA 191 Query: 199 TFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQPDNLLLATAPR 258 +L+ H ++ + LD LQ G ER A+ +P F LLATAP Sbjct: 192 DYLQAEHATVAYADRQALDLDLQLQARGLERRFAVRVPGFAALAAFVRGT--PLLATAPS 249 Query: 259 YCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWLRETIKNLYAS 317 L L +P+ +P ++WH R+ +P WLR ++ + A Sbjct: 250 LLGRTA-LSSLGSFVVPV-------DCPPLPMFMIWHTRHQADPAHAWLRGQLQQVVAQ 300 >UniRef50_C4SSY1 Transcriptional regulator n=1 Tax=Yersinia frederiksenii ATCC 33641 RepID=C4SSY1_YERFR Length = 318 Score = 209 bits (534), Expect = 8e-53, Method: Composition-based stats. Identities = 61/324 (18%), Positives = 118/324 (36%), Gaps = 28/324 (8%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 + +L + LM+ S+TK ++++ ++ ++ S+ LA LR F D LF+ G+ Sbjct: 1 MEFPKFNTEILFFFKTLMETGSLTKTSEKLGMSQASASRQLAHLRKLFKDDLFIRMHYGM 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGLK--FELAAESPLMMIMLNALSKQIY 120 PT S+ + + + LL+ P+ L + A M ++L+ + ++ Sbjct: 61 KPTERAKSLFPQVVATLFDLDQLLEPA-QFDPKRLNGLVRIGAVDNGMFVILSKVINEVV 119 Query: 121 QRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 + PQ I++ I G +D+ S LP LF + Sbjct: 120 KIAPQLCIEVTLITETLFSQIENGILDMAIYSD----------SLLPADFHQADLFEESF 169 Query: 181 CVWLRKDHPAL-----HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMS- 234 + K HP + + +Y + I T + R + Sbjct: 170 SFVVHKCHPLAYYAKVGRIPSTQEVEKYKRVVISVRGGRTGHV-VTTTPFDEARQTDIIC 228 Query: 235 LPEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLW 294 +P F F+ + L R +++ + L ++ P P + L+W Sbjct: 229 VPYFSSIPFLLKGSE-LTSVIPTRLARHFVKAASLVIIPSPNP-------PKKYNVRLIW 280 Query: 295 HKRNSHNPKIVWLRETIKNLYASM 318 H R +N W+R+ I + M Sbjct: 281 HHRVHNNAANRWIRQLILSFAKEM 304 >UniRef50_P30979 Uncharacterized HTH-type transcriptional regulator ybeF n=45 Tax=Enterobacteriaceae RepID=YBEF_ECOLI Length = 317 Score = 209 bits (533), Expect = 1e-52, Method: Composition-based stats. Identities = 65/311 (20%), Positives = 140/311 (45%), Gaps = 19/311 (6%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 + +DLNLL + + + + AAK +N+TPSA+S+S+ KLR F DPLF+ G++P Sbjct: 26 LRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTP 85 Query: 65 TPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYP 124 T + + + +++ ++ LD + +A + ++L + + I YP Sbjct: 86 TAFAMHLHEYISQGLESILGALDIEGSYD-KQRTITIATTPSVGALVLPVIYRAIKTHYP 144 Query: 125 QATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 Q ++ D+ + +++ + D+ R+ + + VLF+D + Sbjct: 145 QLLLRNPPIS-DAENQLSQFQTDLIIDNMFCTNRT----------VQHHVLFTDNMVLIC 193 Query: 185 RKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 R+ +P L + +T H+ + E+ + L +QE+ +R I + + Sbjct: 194 REGNPLLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAAL 253 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 A D L + R+ +++ L LP P + ++ F++ ++K + +P + Sbjct: 254 VANSDMLAI-IPSRFYNLFSRCWPLE--KLPFP----SLNEEQIDFSIHYNKFSLRDPIL 306 Query: 305 VWLRETIKNLY 315 + + I+N + Sbjct: 307 HGVIDVIRNAF 317 >UniRef50_C7QG09 Transcriptional regulator, LysR family n=7 Tax=Actinomycetales RepID=C7QG09_CATAD Length = 307 Score = 209 bits (533), Expect = 1e-52, Method: Composition-based stats. Identities = 59/302 (19%), Positives = 107/302 (35%), Gaps = 23/302 (7%) Query: 21 QERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSMEQNLAEWMQ 80 +E SV AA R++VT A+S+SL ++R D + V + ++PTP +++ + +Q Sbjct: 19 EEGSVAGAADRLHVTAPAMSRSLGRIRRSTGDQILVRTGRTMTPTPYAIAVRAQVHALLQ 78 Query: 81 MSNLLLDKPHHQT--PRGLKFELAAESPLMMIMLNALSKQIYQRYPQATIKLRNWDYDSL 138 +L H F L L+ + AL + ++ P ++ Sbjct: 79 QVQGVLAPSHELDLTTLERTFTLRWHDSLVALGGAALLAAVREQAPGVRLRFIAESSTDS 138 Query: 139 DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPALH---QTW 195 + RGEVD+ + E + V +R H Q Sbjct: 139 PGLRRGEVDL----------EANANPPAAADVRAEKVAETAQVVVVRPGHRLAGEPAQPM 188 Query: 196 NLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQPDNLLLAT 255 + + H+++ + + +D+ L LG R + + P +L D L+ T Sbjct: 189 TAEQYAAADHVAVSRRGNLSGTIDDALARLGLARRVVATAPSEATALEFVRDSD--LVVT 246 Query: 256 APRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWLRETIKNLY 315 AP+ +V L WH+R + WLRE + Sbjct: 247 APQATTRRASADLGLVVL------PLPLDLPPASVYLSWHQRYDTDRAHAWLRELARTAL 300 Query: 316 AS 317 + Sbjct: 301 DA 302 >UniRef50_B8GXY5 Transcriptional regulator, LysR family n=2 Tax=Caulobacter vibrioides RepID=B8GXY5_CAUCN Length = 299 Score = 209 bits (532), Expect = 1e-52, Method: Composition-based stats. Identities = 59/307 (19%), Positives = 117/307 (38%), Gaps = 29/307 (9%) Query: 10 LNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMV 69 L+LL+ ++++ ++T A +R+ ++ AVS++L +LR FDDPL V + TP Sbjct: 20 LDLLVAADVILECENLTLAGERLGLSQPAVSRTLGRLREAFDDPLLVRVAGRMRATPRAE 79 Query: 70 SMEQNLAEWMQMSNLLL-DKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQATI 128 ++ LA ++ + L F + ++L L ++ P + Sbjct: 80 ALRAPLAALLRQAQDLYAQASFDPATATRVFRAVIPDVVAAVILPDLLVRLAMAAPGCRL 139 Query: 129 KLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDH 188 +L W S ++D+ + L+ D + + Sbjct: 140 ELSPWRPQSEQP---RDLDLVITTEVEAF----------PNYRMTPLYQDHDVLAFSGEA 186 Query: 189 PALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQP 248 P+ L H+++ + +D L E GR R IA+ +P + +L + + Sbjct: 187 PSG-------DLLDLKHVAVIGAGAARDPVDRWLAEQGRARRIAVVVPHYLLALQLVVRG 239 Query: 249 DNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWLR 308 D++ + R + V LP P + QQ + + + VWLR Sbjct: 240 DHVAV-LPSRMVAALGAPLGVRCVELPTPQEPDQQWIMH-------PPQLDADAGNVWLR 291 Query: 309 ETIKNLY 315 E + ++ Sbjct: 292 EQVLSIV 298 >UniRef50_Q5DZ29 Transcriptional regulator, LysR family n=2 Tax=Vibrio fischeri RepID=Q5DZ29_VIBF1 Length = 287 Score = 208 bits (531), Expect = 2e-52, Method: Composition-based stats. Identities = 52/307 (16%), Positives = 118/307 (38%), Gaps = 35/307 (11%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +DLNL+ + Q +S TKA++ + +T AVS ++ +L + LF+ G+ T Sbjct: 1 MDLNLVRTFMAVYQCQSYTKASELLMLTQPAVSAAIKRLESEIGKQLFIKKGRGIEATSK 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQI-YQRYPQA 126 ++ + N ++ + + ++ ++ +QI + P+ Sbjct: 61 AHALATKFQFALDTINDAVNDKN-------TLSVYCAEIILHSLVG--LEQINFAESPR- 110 Query: 127 TIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRK 186 + + +VD+ ++ + A E + + V K Sbjct: 111 ------SQSMLFEHLREQKVDLVL----------DVATMKDSAFVIEDAYVEPLVVVCAK 154 Query: 187 DHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAA 246 +HP + + R H+ + + QE ER IA+++ L + Sbjct: 155 NHPRIQGELTKVDYYRESHVIYSALWQGMNGFEQIAQEPVEERNIALTVSSLSSVLMFVS 214 Query: 247 QPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVW 306 Q D+L L + + + + + L + P+ D ++ + ++HKR ++P+ Sbjct: 215 QGDSLGLV-SQSFAKRWEKQLNLAIYPCPVKLDNAK-------YKFIYHKRYINDPQHRK 266 Query: 307 LRETIKN 313 +R+ I + Sbjct: 267 VRQQIID 273 >UniRef50_C9D2D7 Transcriptional regulator, LysR family n=1 Tax=Silicibacter sp. TrichCH4B RepID=C9D2D7_9RHOB Length = 384 Score = 207 bits (528), Expect = 4e-52, Method: Composition-based stats. Identities = 63/328 (19%), Positives = 124/328 (37%), Gaps = 35/328 (10%) Query: 1 MKK-SITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSP 59 M + I+ + +L + E+SV++AA +N + S +S ++ KLR D LFV S Sbjct: 65 MHRIDISQISGRVLRVFLTVYDEKSVSRAADVLNSSQSTISHNIEKLRGLLGDALFVQSG 124 Query: 60 LGLSPTPLMVSMEQNLAEWMQMSNLL-----LDKPHHQTPRGLKFELAAESPLMMIMLNA 114 G+ P+ ++ + + L D P F +A S ++ L Sbjct: 125 RGIVPSARADALAPKVRRILIEMEGLADQGIYDPITDPDP----FIIALSSSVLDGELQT 180 Query: 115 LSKQIYQRYPQATIKLRNWDYDS--LDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDY 172 + + PQ + R+ + + +VD+ + R S + + Sbjct: 181 IYTALRASLPQKHLIFRDLGKQTQIEPLLETRQVDVVLTLRP---------RSYSNTLCH 231 Query: 173 EVLFSDVPCVWLRKDHPALHQTW-NLDTFLRYPHISICWEQSDTWALDNVLQELGRERTI 231 L D V+ P + ++ + H ++ + Q L L+ L R I Sbjct: 232 MTLSQDTMRVFYD---PKIRGPVESIADYCSASHATVAFGQGRKSVLQTELEALAIHRRI 288 Query: 232 AMSLPEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFT 291 + +P + + D +LA+ P + L + P P + + + Sbjct: 289 ILGVPNLWMLIRLLQGTD--MLASLPARAARNTEGI---LASSPFPVELPPNQ-----YD 338 Query: 292 LLWHKRNSHNPKIVWLRETIKNLYASMA 319 L+WH+R S++ ++ WL TI+ + Sbjct: 339 LVWHRRFSNSARLQWLLMTIETALSHSG 366 >UniRef50_A5KW47 Transcriptional regulator, LysR family protein n=1 Tax=Vibrionales bacterium SWAT-3 RepID=A5KW47_9GAMM Length = 297 Score = 206 bits (526), Expect = 6e-52, Method: Composition-based stats. Identities = 56/313 (17%), Positives = 124/313 (39%), Gaps = 21/313 (6%) Query: 6 TTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPT 65 DLNLL ++ Q+ SVTKAA+ +++T SA+S SL +L++ LF + G+ PT Sbjct: 3 HKFDLNLLRIFSVVYQQGSVTKAAEHLDLTQSAISNSLNRLKSSLGQELFNRTGRGVKPT 62 Query: 66 PLMVSMEQNLAEWMQMSNLLLDKPHHQT-PRGLKFELAAESPLMMIMLNALSKQIYQRYP 124 + + L + + +++ H +F + + + + +L +++ + Sbjct: 63 RFAQELYEQLQFSLMEIDTVMEGVTHFNVDHPHRFIVYSHEAIFHTLRQSLDRKLAGKPI 122 Query: 125 QATI-KLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVW 183 + + ++ + + D + ++D+ ++ VL + C Sbjct: 123 EVLLVEIPSDETRIYDDLVNEKIDLVI----------DISRPQGAMFQSSVLREEQLCCI 172 Query: 184 LRKDHPALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 +R +HP ++ ++ N +++L+ H + + +D + E+ +R + Sbjct: 173 VRHNHPRMNLESINKESYLQERHALFDLTRLNLKFVDWITDEVLPQRKAYSEHKSLLGMI 232 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 + D + + + Y + L L LP PF + + N Sbjct: 233 EAVSYSDAVGVVPL-SVAKRYQKAFNLDL--LPFPFANHTFDSFMISLN-----KMRSNA 284 Query: 303 KIVWLRETIKNLY 315 WLRE I + Sbjct: 285 ANTWLRELIYSAV 297 >UniRef50_B2I282 Transcriptional regulator n=17 Tax=Acinetobacter RepID=B2I282_ACIBC Length = 306 Score = 206 bits (526), Expect = 8e-52, Method: Composition-based stats. Identities = 54/317 (17%), Positives = 120/317 (37%), Gaps = 30/317 (9%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 +D+NL + +++S++ AA +N+T SA S +L +LR +D +F+ +S Sbjct: 15 FHRIDINLYPLFIAIYEQKSISNAASSLNITQSAASHALQRLRQQLEDEVFIRVGNKMSA 74 Query: 65 TPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGLK-FELAAESPLMMIMLNALSKQIYQRY 123 TP + + + + + + H P LK ++A + I+L L++ Sbjct: 75 TPFAEQIYPTVKQALLTIQNISQQRHVFDPTSLKSLKIAVHDEIEPIILPRLAQHFQNL- 133 Query: 124 PQATIKLRNWDYD---SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 ++ + D + + ++D +L L I ++ L +D Sbjct: 134 -NLDLQFVSMKLDRKHIMADLATQQLDFVI----------DLEQYLSPKITFDHLVTDEF 182 Query: 181 CVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELG-RERTIAMSLPEFE 239 + + +L +++ HI + ++ D L + R + M + Sbjct: 183 V-ICSQ-----LKEVDLASYISGRHIGVSSRRTGALLEDIYLNQHQKISRNVFMRCQNYS 236 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 +L + + +L Q+ + ++ L +LP + + WH+ Sbjct: 237 TALQVLGAQADAILTMPRMILQHLSYSPEIRLHSLPFEM-------TNIKMGMFWHEDLR 289 Query: 300 HNPKIVWLRETIKNLYA 316 N + +LR I L+ Sbjct: 290 DNLRHQFLRHEIIKLFQ 306 >UniRef50_D0XIH8 Putative uncharacterized protein n=1 Tax=Vibrio harveyi 1DA3 RepID=D0XIH8_VIBHA Length = 311 Score = 206 bits (525), Expect = 9e-52, Method: Composition-based stats. Identities = 62/310 (20%), Positives = 112/310 (36%), Gaps = 19/310 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 D NLL L++L++ R+ +AA+R+N++ SAVS +L++LR FDD LFV GL PT Sbjct: 2 FDYNLLKVLRVLLETRNTKQAAERLNLSQSAVSHALSRLRETFDDALFVRERYGLVPTER 61 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPR--GLKFELAAESPLMMIMLNALSKQIYQRYPQ 125 +E+ L E ++ + LL P K ++ + L + L + ++ P Sbjct: 62 CYELERRLPELIEQIDGLLALEAAFDPSKYQGKVSISLTNALTNAIGVDLYSTLREKAPN 121 Query: 126 ATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 A ++ +W A+ ++ + + +P +R Sbjct: 122 ARFEIMDWRSQVESALLSRKIHVALDYGPEGYSKQIKQELMPKN---------HFMFCVR 172 Query: 186 KDHPALH-QTWNLDTFLRYPHISICW--EQSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 + HP + +YP + I Q+ + + + G I + E + Sbjct: 173 QGHPLTQLDVVTIHNLAKYPMVLIRTPDWQTRHETAEQTMLKAGHVPDILLKSDSPEVNF 232 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 D L + P + K + + + P Sbjct: 233 NAIRHSDAFFPV-----ASVMTTLPDDIVAIHPNVTSSTGLPKQNMDVYAYYLYQTQDTP 287 Query: 303 KIVWLRETIK 312 I WL IK Sbjct: 288 LINWLLSEIK 297 >UniRef50_B4TAI7 LysR-family transcriptional regulator n=40 Tax=Enterobacteriaceae RepID=B4TAI7_SALHS Length = 317 Score = 206 bits (524), Expect = 1e-51, Method: Composition-based stats. Identities = 68/313 (21%), Positives = 134/313 (42%), Gaps = 19/313 (6%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 +++ +DLNLL + + + + AAK +N+TPSA+S+S+ KLR F DPLF+ G+ Sbjct: 24 RTLRNIDLNLLTIFEAVYVHKGIVNAAKILNLTPSAISQSIQKLRTIFPDPLFIRKGQGV 83 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQR 122 +PT + + +++ ++ LD + + + +++ + + I R Sbjct: 84 TPTTYATHLHEYISQGLESILGALDLTGSYD-KQRTITIGTTPSVGALVMPIIYQAIRPR 142 Query: 123 YPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCV 182 YPQ ++ D D+ +++ + D+ + + RS I + VLFSD + Sbjct: 143 YPQLLLRNIPVD-DAESQLSQFQTDLIINTHSYNNRS----------IQHHVLFSDTLEI 191 Query: 183 WLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 R+ HP L + H + E L LQE ++ I+ S Sbjct: 192 VCRQHHPCLANAITEERLNSADHTFLMLEGQHLSLLRQRLQETFPDQQISFSSYNIFTIA 251 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 + A D L L R+ +++ L + +V F+L ++K + +P Sbjct: 252 SLIASSDLLGL-MPTRFYDLFSRCWPLE------RLPYAPVNSEQVEFSLHYNKLSLRDP 304 Query: 303 KIVWLRETIKNLY 315 + + + I+ + Sbjct: 305 VLENVIDIIREAF 317 >UniRef50_A3JPL5 Transcriptional regulator, LysR family protein n=1 Tax=Rhodobacterales bacterium HTCC2150 RepID=A3JPL5_9RHOB Length = 302 Score = 205 bits (522), Expect = 2e-51, Method: Composition-based stats. Identities = 64/325 (19%), Positives = 116/325 (35%), Gaps = 35/325 (10%) Query: 1 MKK-SITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSP 59 MKK I+ +D LL + SV+ A + VT S +S +L +LR +D LFV Sbjct: 1 MKKYDISHVDARLLKIFLSIYDNGSVSATALQFGVTQSTISHALDRLRDALNDTLFVKQG 60 Query: 60 LGLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTP--RGLKFELAAESPLMMIMLNALSK 117 G+ PT + + + + L+ + P F + + + L Sbjct: 61 RGIGPTRTAEDLVPRIRKIVAQIEGLV-EHFDYDPMADKQPFTITTN---VAELTPELVN 116 Query: 118 Q---IYQRYPQATIKLRNWDY--DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDY 172 + P+ T++ L + D+ S R ++P A++ Sbjct: 117 VRSNLMAINPEQTLRFIELGSVGTLLPMLDEDRADVALSIRPK---------TIPAALER 167 Query: 173 EVLFSDVPCVWLRKDHPALHQTWN-LDTFLRYPHISICWEQSDTWALDNVLQELGRERTI 231 SD V+ D + ++ + H ++ + + + L +L R I Sbjct: 168 HPFLSDPMVVFFDPD---IRGPITSIEEYCNARHAALDFGSDKKSIVSSALDKLSLTRKI 224 Query: 232 AMSLPEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFT 291 + M D ++AT + H L P P V F Sbjct: 225 QLGAANVYSLGQMIKGTD--MIATMSARLFHSALSH---LEHCPAPITLP-----PVKFD 274 Query: 292 LLWHKRNSHNPKIVWLRETIKNLYA 316 + WH+R S++P+ +WLRE + + Sbjct: 275 MFWHRRYSNSPRNIWLRELVVRSVS 299 >UniRef50_A0AWD6 Transcriptional regulator, LysR family n=2 Tax=Arthrobacter RepID=A0AWD6_ARTS2 Length = 301 Score = 204 bits (521), Expect = 2e-51, Method: Composition-based stats. Identities = 56/313 (17%), Positives = 100/313 (31%), Gaps = 25/313 (7%) Query: 9 DLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLM 68 DLN L L + RSVT AAKR++VT VS SL +LR F D LF + PT Sbjct: 5 DLNQLRTFVTLYELRSVTGAAKRLHVTQPTVSYSLKRLRERFGDELFCREGNDMVPTAKA 64 Query: 69 VSMEQNLAEWMQMSNLLLDKPHHQTPR--GLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + L + + + P + L S L + + + Sbjct: 65 TQLFGPLHNALAQIDATVMGSDVFEPTGFSGELFLGLTSIGEQTFLPPIMTALGRAGADP 124 Query: 127 TIKLRNWDYDSLD-AITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 I++ D D ++ + RG +D+ + + + S Sbjct: 125 RIQVERLDSDEVEGGLIRGTIDLALTVSRIAT----------PRLWRTHVRSVEYVALSS 174 Query: 186 KDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMA 245 HP ++ F + + + + L E + +++ E+ + Sbjct: 175 GSHPLPATGPDM--FEGRRFVRVSARGGHVYPV-QALTEHDLMSQVVLTMEEYGTVPAVL 231 Query: 246 AQPDNLLLATAPRYCQYYNQLHQ-LPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 D L++ + L + LP P L + S + Sbjct: 232 EATD-LVVLLPRHVAGVFCGWFPRLRIAELP-------WSGHSTPVELYTRREASLSQAQ 283 Query: 305 VWLRETIKNLYAS 317 W R + + A+ Sbjct: 284 RWFRSLVLDAVAA 296 >UniRef50_C8PY46 Transcriptional regulator, LysR family n=1 Tax=Enhydrobacter aerosaccus SK60 RepID=C8PY46_9GAMM Length = 315 Score = 203 bits (518), Expect = 6e-51, Method: Composition-based stats. Identities = 57/328 (17%), Positives = 117/328 (35%), Gaps = 31/328 (9%) Query: 2 KKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLG 61 K + LDLNLL + + +++T A+ ++++ SA+S +L +LR D LF Sbjct: 4 KNPLKQLDLNLLRLFIYIFELKNLTHTAEALHLSQSAISHALGRLRQALGDELFYREKGE 63 Query: 62 LSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG---------LKFELAAESPLMMIML 112 L PT + + + + + H + +A + +I+ Sbjct: 64 LHPTLYAKRLYPTVKQSFENLEQIFQTNHLLSEDKLGELAQQSFATLTIAMHDEIELIVF 123 Query: 113 NALSKQIYQRYPQATIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAID 171 N L QI+Q P I + + + G++D ++ + I Sbjct: 124 NKLVSQIHQVLPNCQITSSRLNRSELAHELKVGQLDFAI----------DVARVVDSEIV 173 Query: 172 YEVLFSDVPCVWLRKDHPAL----HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGR 227 ++ L D + L + A T + HI++ + D++L + G Sbjct: 174 HQPLLRDEFVLVLYAPNFAAELANEPTITQAQYFASQHITVSSRRLGLSIEDSLLSKAGW 233 Query: 228 ERTIAMSLPEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLE 287 +R + + + + Q LL + ++ LP+ Sbjct: 234 QRQSKIRCQHYATAFQLLKQDKLLLTLPRQLATTFLPPAQGWQILDLPIAL-------TH 286 Query: 288 VPFTLLWHKRNSHNPKIVWLRETIKNLY 315 + WH++ +P WLR+ I + + Sbjct: 287 IELHGYWHQQQQVDPLYGWLRQQIFSAF 314 >UniRef50_A6CWQ5 Transcriptional regulator, LysR family protein n=1 Tax=Vibrio shilonii AK1 RepID=A6CWQ5_9VIBR Length = 312 Score = 203 bits (517), Expect = 9e-51, Method: Composition-based stats. Identities = 68/327 (20%), Positives = 124/327 (37%), Gaps = 33/327 (10%) Query: 1 MKKSI-TTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSP 59 M ++ LD N L L++L +ER+ +AA R+ ++ AVSK L KLR F D LF+ Sbjct: 1 MDDNLLRRLDFNTLKLLKVLGEERNTKRAADRMFLSQPAVSKQLKKLREEFADELFIRKQ 60 Query: 60 LGLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPR--GLKFELAAESPLMMIMLNALSK 117 GL PTP + +++ L ++ L + P +A + L + L Sbjct: 61 YGLEPTPYCLELQEKLPALFELLEDLFSRNQQFNPALYTGDISIAINTTLYRPVSRRLYH 120 Query: 118 QIYQRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFS 177 + P AT+K+ NW D+ + + IG + + + + L Sbjct: 121 HLRPLLPNATLKIINWGQDTEHDLKLARLHIGINYLPLD---------ISKQVIQKKLTH 171 Query: 178 DVPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDT--WALDNVLQELGRERTIAMSL 235 + R HP L +YP + + ++ L+E+G + + Sbjct: 172 CYFKLICRDGHPVLETQRTTQDIGQYPLALLQLPDFNKKENLIETKLREVGITPQVGLRA 231 Query: 236 PEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLP-----FDESQQKKLEVPF 290 + L + AQ D++L + LP F ++ +L Sbjct: 232 DQLSICLHVVAQTDSILPCV--------------DIFDADLPQGTQFFSAHKEHQLGSDI 277 Query: 291 TLLWHKRNSHNPKIVWLRETIKNLYAS 317 L + S+ P + WL ++ ++ Sbjct: 278 GALIPSKLSNAPLVKWLYSEVRTVFDQ 304 >UniRef50_A6W9Y1 Transcriptional regulator, LysR family n=3 Tax=Actinomycetales RepID=A6W9Y1_KINRD Length = 303 Score = 202 bits (516), Expect = 1e-50, Method: Composition-based stats. Identities = 70/314 (22%), Positives = 127/314 (40%), Gaps = 21/314 (6%) Query: 7 TLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTP 66 LDLNLL L+ L++E SV AA R+ ++ AVS+SL ++R D + V + ++ T Sbjct: 2 HLDLNLLTVLEALVEEGSVAGAAARLRLSSPAVSRSLGRIRRLTGDEILVRTGRTMTRTT 61 Query: 67 LMVSMEQNLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQIYQRYP 124 ++++ + E ++ + LL F L A L + AL + + P Sbjct: 62 YALAVQDRIGELLRQAEQLLVPSSSLDLATLDRVFTLRAHDALTAALAPALLRDVLATAP 121 Query: 125 QATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 ++ + + VD+ + + +E+L SD V L Sbjct: 122 GVRLRFLAETTHDTEELRHAAVDLELGSKVPTV----------PELRHELLGSDPLVVVL 171 Query: 185 RKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 R+ HP +L T+ PH+ + +D+ L + GR R + S+ + + Sbjct: 172 RRGHP-ATARLDLATYAALPHVVVSRRGRLRDPVDDALGDHGRHRLVVASVGTIAAAAQI 230 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 A D L A R + + +L +PL Q +WH+R+ + Sbjct: 231 VAGTDAALAAPG-RVVEAVTEAFELINEPVPLELPAPQVIS-------VWHQRSESDAAH 282 Query: 305 VWLRETIKNLYASM 318 WLRE ++ ++ Sbjct: 283 AWLRERVRATTEAL 296 >UniRef50_Q1LCA7 Transcriptional regulator, LysR family n=1 Tax=Cupriavidus metallidurans CH34 RepID=Q1LCA7_RALME Length = 331 Score = 202 bits (515), Expect = 1e-50, Method: Composition-based stats. Identities = 60/318 (18%), Positives = 118/318 (37%), Gaps = 21/318 (6%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 + DLNLL+ L +++ SV++AA+R++ T ++S+ L +LR DPL + S + P Sbjct: 31 LRKKDLNLLVVLAAMLESNSVSEAARRLDSTQPSMSRMLDRLRDDLGDPLLIKSAHKMLP 90 Query: 65 TPLMVSMEQNLAEWMQMSNLLLDKPHHQTPR--GLKFELAAESPLMMIMLNALSKQIYQR 122 T + + L + ++ + + P + + L ++ A + Q Sbjct: 91 TRRAQDIRRVLDDVLRAIEGVYQQGSDYNPAMETGTYVIGINDSLQALIAPAFLASLRQV 150 Query: 123 YPQATIKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPC 181 P+A ++++ + A+T G +D+ + S + E+L + Sbjct: 151 APRARVRMQPVPQQGGISAMTSGAIDLMVAFYPVDMES----------LRSELLLTTRFG 200 Query: 182 VWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQS 241 + +P + + + I T LD Q G R I +L + Sbjct: 201 CLSARSNPHIGAITSARELASLDCLDISQFGLITRLLDRYFQSHGLHRRIVGTLTSYLAV 260 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 + A P Y H + F + + + VP L WH + Sbjct: 261 ADAIHDTEIY--AMIPDYLARPLCRHPG------MRFSPMEDEGMAVPIHLCWHNNVHSH 312 Query: 302 PKIVWLRETIKNLYASMA 319 P + LR + + +A Sbjct: 313 PFVTVLRSLLASAARHVA 330 >UniRef50_A6CV71 Putative transcriptional regulator n=1 Tax=Vibrio shilonii AK1 RepID=A6CV71_9VIBR Length = 309 Score = 202 bits (514), Expect = 2e-50, Method: Composition-based stats. Identities = 65/318 (20%), Positives = 116/318 (36%), Gaps = 23/318 (7%) Query: 1 MKKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPL 60 M +T LDLNLL + +ER++ +AA+R+ +T AVS L KL+ LF+ P Sbjct: 1 MSNILTNLDLNLLKAFVITYKERNLKRAAERLFITAPAVSVKLNKLKQELGGELFIKVPT 60 Query: 61 GLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPR--GLKFELAAESPLMMIMLNALSKQ 118 G PT L + + + + + P + + + L Sbjct: 61 GFEPTALADHLYERVEPLLNQLYSDIGSLKGFEPAKLSGRVNIDLGQHFISWFAPKLFSL 120 Query: 119 IYQRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSD 178 + QA++ + +++ + G+VDIG +P I L Sbjct: 121 VKSSAHQASMTFNGFSENTISNLRHGDVDIGIEYARVD---------IPNDIMELPLKIK 171 Query: 179 VPCVWLRKDHPALHQTWNLDTFLRYPHISICW----EQSDTWALDNVLQELGRERTIAMS 234 + +RKDHP +T ++ Y I + ++ G + + Sbjct: 172 PLVMAVRKDHPITSKTARVEELAGYGCAMIELNLDEGGKRWHFIHEAERQCGVKLEPEFT 231 Query: 235 LPEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLW 294 E + + A+ QY +L + V + + P +L Sbjct: 232 SSSLEAVVETLCHSNMFCPASKHIVEQYSGKLKSIEFVEM--------LDLVNYPVSLYL 283 Query: 295 HKRNSHNPKIVWLRETIK 312 H+RN H+PK WL + I+ Sbjct: 284 HRRNRHSPKHQWLIDQIQ 301 >UniRef50_C9XYN5 Uncharacterized HTH-type transcriptional regulator ybdO n=3 Tax=Cronobacter RepID=C9XYN5_CROTZ Length = 334 Score = 201 bits (513), Expect = 2e-50, Method: Composition-based stats. Identities = 62/299 (20%), Positives = 112/299 (37%), Gaps = 27/299 (9%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 + + DLNLL+ + + RSV+KAA+ + +TPSA+S+SL +LR +DPLFV S G+ Sbjct: 19 QDLKKFDLNLLVIFECIYLYRSVSKAAEALFLTPSAISQSLQRLRNQLNDPLFVRSGKGI 78 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQR 122 +PT + ++ L + + ++ P F L L L L + Sbjct: 79 TPTTVGTNLHHYLEDNLNQLEQTINMMQG-APLRKNFVLYCPPALAADHLPGLVSAFREH 137 Query: 123 YPQATIKLRNWD-----YDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFS 177 Y +L ++D + D + + D+ S + + FS Sbjct: 138 Y---DFELEHYDTSLASETAEDLLAYRKADLIIGMAPVTSHS----------VICKHCFS 184 Query: 178 DVPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPE 237 + + ++HP L + + EL ER IA + Sbjct: 185 EETVLVCSENHPRLGDHADDAALAQEKFTLFNGTAEGQKHYHVKSGELIGERQIAFTSNS 244 Query: 238 FEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHK 296 + + D + + AP + Y Q+ L V L + L++++ Sbjct: 245 LSSIMAIIGSTDFIGILPAPAL-RRYRQVFGLRPVKLNFSLP-------HYDYYLIYNR 295 >UniRef50_C5ALA9 Transcriptional regulator, LysR family protein n=4 Tax=Proteobacteria RepID=C5ALA9_BURGB Length = 318 Score = 200 bits (510), Expect = 5e-50, Method: Composition-based stats. Identities = 66/321 (20%), Positives = 121/321 (37%), Gaps = 18/321 (5%) Query: 2 KKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLG 61 + LDL ++ L + +S + A+ ++++ VS L +LR F D LF Sbjct: 4 SNVLRQLDLQDVMVFLYLYEHKSARRTAEVMSISQPTVSYCLKRLRNCFHDVLFDVDHGS 63 Query: 62 LSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQI 119 L TP ++E L + N D Q + A +++L + + Sbjct: 64 LVATPKAEAIEPYLRNVIDAVNHCADMDDDQVTATTRRVMRVCAPEYFELVLLPGVLESF 123 Query: 120 YQRYPQATIKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSD 178 +R + ++ + D ++ + GE+D + R L + +E + SD Sbjct: 124 MKRGRETSLIVDRLGRDLPVERLLAGEIDFAIGFGPGYHR-------LHPDLQWESVLSD 176 Query: 179 VPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEF 238 A +LD F H+ S+ +D L++LGR R+I + Sbjct: 177 TFVCLTASRKLAPSTRVSLDEFCDMDHVFPTPWVSERNMIDGWLEKLGRSRSIVARANTY 236 Query: 239 EQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRN 298 + SL + A+ + L R QY + + + +PL F ++W Sbjct: 237 QASLNIVAR-LPVSLTLPRRLLQYLSIPATVQVCDVPLGFPT-------FTLDVVWSMSM 288 Query: 299 SHNPKIVWLRETIKNLYASMA 319 NP + LR K+L + A Sbjct: 289 ERNPDLRTLRSLFKDLANANA 309 >UniRef50_Q1GIZ4 Transcriptional regulator, LysR family n=1 Tax=Ruegeria sp. TM1040 RepID=Q1GIZ4_SILST Length = 317 Score = 199 bits (508), Expect = 8e-50, Method: Composition-based stats. Identities = 63/326 (19%), Positives = 123/326 (37%), Gaps = 34/326 (10%) Query: 2 KKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLG 61 + I+ + +L + E+SV++AA + + S +S ++ KLR D LFV S G Sbjct: 3 RIDISQISGRVLRVFLTVYDEKSVSRAADVLESSQSTISHNIEKLRGLLGDALFVQSGRG 62 Query: 62 LSPTPLMVSMEQNLAEWMQMSNLL-----LDKPHHQTPRGLKFELAAESPLMMIMLNALS 116 + P+ + + + L D P F +A S ++ L + Sbjct: 63 IVPSARADVLAPKVRRILIEMEGLADQGIYDPITDPDP----FVIALSSSILDGELETIY 118 Query: 117 KQIYQRYPQATIKLRNWD--YDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEV 174 + PQ + R+ + + + D+ + R S P + + Sbjct: 119 DALRLSLPQKHLMFRDLGKLSEIEPLLETRQADVVLTLRP---------RSYPNTLRHMA 169 Query: 175 LFSDVPCVWLRKDHPALHQTW-NLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAM 233 L D V+ P + +++ F PH ++ + Q L L+ L R + + Sbjct: 170 LTQDSFRVFYD---PNVRGPVDSVEDFCGAPHATVSFGQGSKSLLQTELEALAIHRRVTL 226 Query: 234 SLPEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLL 293 +P + + D ++A+ P + L + P P + + F L+ Sbjct: 227 GVPNLWTLIRLMQGTD--MIASLPSRSSRHTTG---TLASSPFPVELP-----PLQFDLV 276 Query: 294 WHKRNSHNPKIVWLRETIKNLYASMA 319 WH+R + + ++ WL TI+ A A Sbjct: 277 WHRRFADSARLQWLLMTIETALAQQA 302 >UniRef50_UPI0001AF1AB6 LysR family transcriptional regulator n=2 Tax=Streptomyces RepID=UPI0001AF1AB6 Length = 307 Score = 199 bits (506), Expect = 1e-49, Method: Composition-based stats. Identities = 59/300 (19%), Positives = 114/300 (38%), Gaps = 26/300 (8%) Query: 21 QERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSMEQNLAEWMQ 80 +ERSVT+AA+R+ ++ A+S +L ++R D L V G++ TP + + L +Q Sbjct: 32 EERSVTRAAERVGLSQPAMSHALTRMRRLLGDDLVVRQGAGVTLTPRALELIVPLRRVLQ 91 Query: 81 MSNLLLD-KPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQATIKLRNWDYDSLD 139 + ++D +A + ++ L++ + +R P AT++LR + Sbjct: 92 QTASIVDFPCFDPATDRRVITIAMTNSTAFVIGPRLTRLLAERAPHATLRLRTITVPTEA 151 Query: 140 AITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPALHQTWNLDT 199 T VD+ E L++D V D P +L Sbjct: 152 TFTDQGVDVVLISEGHFSP-----------YPRERLYNDRCVVVASPDTPPEASALDL-- 198 Query: 200 FLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQPDNLLLATAPRY 259 PH+ + ++ +VL+E G + +F F+ A+ +A + Sbjct: 199 LTTQPHVVVDTDRRVFPY--SVLEEKGIPYRVGQLSSDFLLVPFLVARSG--GVALLRHH 254 Query: 260 -CQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWLRETIKNLYASM 318 L L + P P + ++W+ R S + WLR + + + + Sbjct: 255 VAATMRTLSDLRIEEFPFPLP-------GLGIDMVWNPRLSDQYFVEWLRALLFDAASQL 307 >UniRef50_Q47ZG5 Transcriptional regulator, LysR family n=2 Tax=Alteromonadales RepID=Q47ZG5_COLP3 Length = 299 Score = 197 bits (503), Expect = 3e-49, Method: Composition-based stats. Identities = 57/284 (20%), Positives = 123/284 (43%), Gaps = 25/284 (8%) Query: 22 ERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSMEQNLAEWMQM 81 ER+++K A + +T A+S+ L K+R FDD +F+ + G+ PT + ME + + + Sbjct: 21 ERNLSKVAHIMGLTQQAISEQLKKIRHSFDDEMFIRTSNGVIPTQVAERMEHRVNQILAD 80 Query: 82 SNLLL-DKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQATIKLRNWDYDSLDA 140 + L+ + + ++++ ++ +L L Q+ P + +R+++ D+L+ Sbjct: 81 IDNLITGEKFNPAELSGILQISSSDYALVTILPMLLTQVNALAPNLKVIIRDFESDNLNQ 140 Query: 141 IT-RGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPALHQTWNLDT 199 + GE+D+ F+ E +P + LF D + + ++L Sbjct: 141 LMVTGELDLVFTFPEF----------IPDNYPNKRLFEDHHVCVTGSNSIYRGKKYSLLE 190 Query: 200 FLRYPHISICW-EQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQPDNLLLATAPR 258 + P I I + + D+ + G +R I MS+P F + + + +A P Sbjct: 191 LAQLPQIVISPSRPNLKGSHDSWFAKQGMKRHILMSVPSFSAASTIIEATNT--IAFLPS 248 Query: 259 YCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 +L + + +Q + + WH+R+++NP Sbjct: 249 RLLPDPKLVAIEI----------EQNPPKFDVIVAWHQRSNNNP 282 >UniRef50_B1KKW0 Transcriptional regulator, LysR family n=3 Tax=Shewanella RepID=B1KKW0_SHEWM Length = 314 Score = 197 bits (503), Expect = 3e-49, Method: Composition-based stats. Identities = 57/302 (18%), Positives = 110/302 (36%), Gaps = 23/302 (7%) Query: 20 MQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSMEQNLAEWM 79 ++E SV+K+A+R++++ A+S++L K+R FD+PLFV G+ T S+ L EW+ Sbjct: 24 IEEGSVSKSAERLDISQPAMSQNLKKIRNLFDEPLFVKHGQGIKATEKARSLLPGLHEWL 83 Query: 80 QMSNLL-LDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQATIKLRNWDYDSL 138 +MS+ L L K +A + ++ L + + Q P ++ + Sbjct: 84 EMSSRLILQKAFDPKEVYGVVRIAFIDTMTSEIVPQLLEMVMQAAPNVELEFIHKPKHMF 143 Query: 139 DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPALH-QTWNL 197 + GE+D+ G E+ P I + + C+ HP +L Sbjct: 144 SMLESGELDLCIGGTETP----------PANIYGRKIGLERFCIASSPTHPINQLSNPSL 193 Query: 198 DTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF-MAAQPDNLLLATA 256 + + + + Q R ++ S + A Sbjct: 194 ADIFSFETAEYSASNAAEPQITQLAQANNLNRKVSFSTSSMLVLRNGLLAG--------- 244 Query: 257 PRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWLRETIKNLYA 316 ++ + + + + EV TL WH R +P + W + L + Sbjct: 245 -KHIAFISDIVTQNPYWKDKLSILKHEALPEVESTLYWHARVHQDPLVQWFKNRCLELAS 303 Query: 317 SM 318 Sbjct: 304 GF 305 >UniRef50_D0YJS8 Transcriptional regulator, LysR family n=2 Tax=Klebsiella RepID=D0YJS8_KLEVA Length = 319 Score = 196 bits (499), Expect = 9e-49, Method: Composition-based stats. Identities = 72/317 (22%), Positives = 131/317 (41%), Gaps = 19/317 (5%) Query: 1 MKKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPL 60 M + + +DLNLL + + + + AAK +N+TPSA+S+S+ KLRA F DPLF+ Sbjct: 22 MFRILRNIDLNLLTIFEAVYVHKGIVNAAKILNITPSAISQSINKLRALFPDPLFIRKGQ 81 Query: 61 GLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIY 120 G+ PT + Q ++ M+ LD + +A + +++ ++ + Sbjct: 82 GVMPTAYATHLHQYISRGMEAFLSALDIAGSP-HQQRVITIATTPGMGALLIPIVASALK 140 Query: 121 QRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 +PQ + D+ + + +VD+ ++ I + VL+ D Sbjct: 141 PAFPQILLHNIAIT-DAARQLDQRQVDLLIDTHLHSGQA----------ISHHVLYQDRV 189 Query: 181 CVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQ 240 ++ R +HPALH + +Y + E L LQE ER S Sbjct: 190 RMYCRAEHPALHGPQDEAHLAQYEFALLLPEGQRYPTLHRRLQEEMGERRCGFSTFNLLT 249 Query: 241 SLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 M A+ D L L T R ++L L D + ++ L ++K++ Sbjct: 250 QAAMIAESDMLGLTT-ERLFAMVSRLWPLQT------LDFHSLQDEKINVALHYNKQSGK 302 Query: 301 NPKIVWLRETIKNLYAS 317 P + + ET+ + + Sbjct: 303 EPLLKEIIETVIQAFKA 319 >UniRef50_Q0HIH2 Transcriptional regulator, LysR family n=5 Tax=Gammaproteobacteria RepID=Q0HIH2_SHESM Length = 305 Score = 195 bits (496), Expect = 2e-48, Method: Composition-based stats. Identities = 59/314 (18%), Positives = 110/314 (35%), Gaps = 20/314 (6%) Query: 7 TLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTP 66 L+ NLL L L++ +S+ A ++ + SAVS++L LR F+D L + T Sbjct: 2 RLNYNLLKPLSFLLETQSINDTATQLKTSSSAVSRTLKTLRHIFEDELLTRKNGKMELTT 61 Query: 67 LMVSMEQNLAEWMQMSNLLL-DKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQ 125 +++ + ++ ++ L ++ + +A + + L + + P Sbjct: 62 KAIALREKVSRIIEEIESLTENESFNPLMLTSNITIAMNASIAQWFAPLLIDHLAKNAPG 121 Query: 126 ATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + + +W + I VD G + + L D V R Sbjct: 122 IKLTIEDWSDATPQHICEHRVDYGIHYFPLNLSKNLVQKCGEL---------DHFVVVCR 172 Query: 186 KDHPALHQTWNLDTFLRYP---HISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 HP Q LD F ++P H+ + L L++LG E +A+ L Sbjct: 173 TQHPLATQNIKLDHFSQFPLAVHVM-KYWNEGQDHLSRYLKKLGVETNVALRTTHLSVLL 231 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 D L + + + + + L F QQ+ + K S++ Sbjct: 232 KALENNDYLFPCSI-NLAKTLDTKFTY-ISSDSLSFVPLQQRNFGFLYD----KTRSNDE 285 Query: 303 KIVWLRETIKNLYA 316 I W I L Sbjct: 286 LIHWFHGEISELMR 299 >UniRef50_Q2NRV1 Putative transcriptional regulator n=1 Tax=Sodalis glossinidius str. 'morsitans' RepID=Q2NRV1_SODGM Length = 199 Score = 194 bits (494), Expect = 4e-48, Method: Composition-based stats. Identities = 41/188 (21%), Positives = 80/188 (42%), Gaps = 14/188 (7%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 +++ +DLNLL+ + L + +VT A KR+N +VS +L +LR F D LFV + G+ Sbjct: 13 MNLSAVDLNLLVVFEALYETGNVTLAGKRLNRAQPSVSNALGRLRLLFQDELFVRTAGGM 72 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG---LKFELAAESPLMMIMLNALSKQI 119 PT ++ +A + L++ P +F LAA ++++ + +++ Sbjct: 73 VPTEKAQTLIPAIAAILDQLRNTLNRDSAFDPDRAHGRRFTLAASDYADIVLIPHIVRRL 132 Query: 120 YQRYPQATIKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSD 178 + P + L D + + +VDI G + P + L+ + Sbjct: 133 RRLAPGIDLHLCTLDRERIYTQLDNAQVDIAIGGHLTP----------PKRMRVVPLYRE 182 Query: 179 VPCVWLRK 186 + Sbjct: 183 DFVCIADR 190 >UniRef50_Q5YTB7 Putative transcriptional regulator n=1 Tax=Nocardia farcinica RepID=Q5YTB7_NOCFA Length = 305 Score = 194 bits (494), Expect = 4e-48, Method: Composition-based stats. Identities = 75/314 (23%), Positives = 128/314 (40%), Gaps = 20/314 (6%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 + LDLNLL+ L L+ SVT+AA+R++ +PSA+S++LA+LR DDPL V S L P Sbjct: 1 MAPLDLNLLVALDSLLDTGSVTEAARRLHTSPSAMSRTLARLRRLLDDPLLVRSGRHLVP 60 Query: 65 TPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQIYQR 122 TP +++ +A ++ +L P F + A+ ++ + L + + Sbjct: 61 TPRALALRPEVAALVEHGRAVLAPRGRVDPATLARGFAVRADDLVLARLAGPLVRAVRAH 120 Query: 123 YPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCV 182 P TI+ + G D+ +L I +F D Sbjct: 121 APGVTIRFLPDAGKGAADLRDGRADLAVG----------VLEPADPEIVVHRVFGDRLVG 170 Query: 183 WLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 + HP + + H+++ + +D+ L GR R + ++P+ +L Sbjct: 171 VVAPGHPLDADRVTVAAYAGAAHLAVTRQGRPRGPIDDRLALHGRTRRVVATVPDLPSAL 230 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 + + A L +PLP E+P L WH RN+ + Sbjct: 231 LAVRGGELVCPA-PAHLAADAVAALGLATFEIPLPLP-------EIPVGLTWHSRNTADA 282 Query: 303 KIVWLRETIKNLYA 316 WLRE ++ L A Sbjct: 283 AHRWLRELVETLLA 296 >UniRef50_D0XIC6 Putative uncharacterized protein n=1 Tax=Vibrio harveyi 1DA3 RepID=D0XIC6_VIBHA Length = 304 Score = 193 bits (492), Expect = 5e-48, Method: Composition-based stats. Identities = 57/307 (18%), Positives = 106/307 (34%), Gaps = 35/307 (11%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +DLNL+ ++ + +S TKAA+++ VT AVS S+ +L + LFV S + T Sbjct: 20 IDLNLINTFLVVTESQSYTKAAEQLGVTQPAVSASIRRLEQASNKKLFVKSGRSIELTHT 79 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQAT 127 + L + + + + + KP ++ + Sbjct: 80 ARELLPQLRKALSIIDNAMTKPQLFKA-------YCCDLPLLGLSPI---------DNVI 123 Query: 128 IKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRK 186 D L D + + DI + + P +I E L + + R Sbjct: 124 FHESTQDAGELCDFLYHRKADIIIG----------CIGNKPTSIIVEDLHQEPFVIIGRA 173 Query: 187 DHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAA 246 DHP L + ++D F H + S + L + I + + L A Sbjct: 174 DHPRLGKRLDIDAFHNEKHCVLSSTWSVETEHETALNVTIKANQIEVVTSSYLGVLTNVA 233 Query: 247 QPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVW 306 Q D L + + + + P P + F + +HKR++ + Sbjct: 234 QRDCLGVVPL-SVAKRWGGALNIRYFQSPFP-------SGQFTFQIAYHKRHADCAEHRA 285 Query: 307 LRETIKN 313 +R +K Sbjct: 286 MRRVLKE 292 >UniRef50_Q489T6 Transcriptional regulator, LysR family n=1 Tax=Colwellia psychrerythraea 34H RepID=Q489T6_COLP3 Length = 309 Score = 193 bits (491), Expect = 7e-48, Method: Composition-based stats. Identities = 63/299 (21%), Positives = 121/299 (40%), Gaps = 22/299 (7%) Query: 21 QERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSMEQNLAEWMQ 80 +E++V++AA+R+ ++ SA+S++L +LR FDDPLF + G+ PT S+E L + +Q Sbjct: 24 KEKNVSRAAERLYLSQSAMSRTLQRLRDLFDDPLFHRTASGIVPTEKAHSIEALLPDLLQ 83 Query: 81 MSNLLL-DKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQATIKLRNWDYDSLD 139 +L D F ++ S + L + I P + + S Sbjct: 84 KLESILHDDDFSPQTCDKHFSISLPSLTSHAIFLPLVQAINNEAPAVQLSEYSAKMSSNK 143 Query: 140 AITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPA-LHQTWNLD 198 ++ G +D + A L ++ RK HP L Sbjct: 144 SLESGFLDFAIHIEKPT----------DTAFIATSLGKLSLSIFARKSHPLSAQHKVELA 193 Query: 199 TFLRYPHISICWEQSD----TWALDNVLQELGRERTIAMSLPEFEQSLFMAAQPDNLLLA 254 L Y + + + T +D++L + G +R I + + + + + LL+A Sbjct: 194 DCLTYRFLELNVNEDSGAIFTNPIDSILLKQGFKRDIQLKTSQLSILVELLKSSNTLLIA 253 Query: 255 TAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWLRETIKN 313 + ++ ++ LV++ + Q V LL H+R ++ WLR+ + Sbjct: 254 PSFFI---HSSTYKEELVSV---YQFEQTDSNMVELFLLQHQRTVNSAAHQWLRDKVLQ 306 >UniRef50_Q2JZS7 Putative transcriptional regulator protein, LysR family n=2 Tax=Rhizobium etli RepID=Q2JZS7_RHIEC Length = 272 Score = 191 bits (487), Expect = 3e-47, Method: Composition-based stats. Identities = 44/266 (16%), Positives = 90/266 (33%), Gaps = 28/266 (10%) Query: 62 LSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTP--RGLKFELAAESPLMMIMLNALSKQI 119 + PT + + Q + + + L P F L +++ L+ ++ Sbjct: 1 MMPTARALELRQPIRQALAGMEEALATNAAFDPTTSTRSFVLIGSDYFSSLLMPPLAARV 60 Query: 120 YQRYPQATIK-LRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSD 178 + P T++ + + + + + G DI P + LF Sbjct: 61 AKTAPFVTLQMIDHASSEVFEMLRDGRADIVIDRSLEP----------PEWVISRKLFQS 110 Query: 179 VPCVWLRKDHPAL-------HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTI 231 ++ HP L D F PH+ + S T +D L LG R + Sbjct: 111 WLVCIAKRGHPLLASHGICPGDAIPADVFCAVPHVLRSADGSRTGTIDPALARLGLARRV 170 Query: 232 AMSLPEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFT 291 +++P F+ + L + + + L + P+ ++ T Sbjct: 171 MVTVPHFQAVALAVEASEMLG-SIPVHFARMLTGRLMLDVFRPPM-------DSPKMDVT 222 Query: 292 LLWHKRNSHNPKIVWLRETIKNLYAS 317 + W +R +P VWLR+ I + ++ Sbjct: 223 MYWLRRFDRDPGSVWLRDQIAHALSA 248 >UniRef50_A7JY23 Transcriptional regulator LysR family n=3 Tax=Vibrio RepID=A7JY23_VIBSE Length = 280 Score = 191 bits (486), Expect = 3e-47, Method: Composition-based stats. Identities = 52/311 (16%), Positives = 109/311 (35%), Gaps = 36/311 (11%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +D NL+ ++ + +S ++AA+ + +T A+S S+ +L + LFV + T + Sbjct: 1 MDFNLIQTFLIVAEYQSYSRAAEHLGLTQPAISASMKRLEKETNKSLFVKDGRQIKLTSV 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQAT 127 + + M N + F L+ L+ + + + Sbjct: 61 AHQLLPKFHQAFAMINDAISD-------QSTFRLSCNEALIHRITPTNT---------IS 104 Query: 128 IKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKD 187 I L+ + ++D+ S H + E +F + V R+D Sbjct: 105 ICADTDLPSLLNDLRLKQIDLIISPTTIHN----------PSFISESVFEEPMVVICRQD 154 Query: 188 HPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRE-RTIAMSLPEFEQSLFMAA 246 HP + + F H D + + + G + R + M + A Sbjct: 155 HPRIAGKIEQEQFYSEKHCRF-VGDEDFPVSNTEIHQPGLQERDVEMMTTSLSGMMLYVA 213 Query: 247 QPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVW 306 + D L + Q + L ++ P+ V + L++HKR+ + Sbjct: 214 KHDCLGVLPL-SLAQKWQSALNLQVIQTPM-------FSEPVSYKLIFHKRDESSTSHQR 265 Query: 307 LRETIKNLYAS 317 LR ++ +A+ Sbjct: 266 LRAWARDQFAT 276 >UniRef50_Q5E1I8 Transcriptional regulator, LysR family n=3 Tax=Vibrionaceae RepID=Q5E1I8_VIBF1 Length = 279 Score = 191 bits (486), Expect = 3e-47, Method: Composition-based stats. Identities = 64/312 (20%), Positives = 116/312 (37%), Gaps = 36/312 (11%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++LN + + SVTKAA +N+T ++S ++ K + PLF+ L PT Sbjct: 1 MNLNFIKHFLAVYDFGSVTKAADYLNITQPSMSSAIKKFEESYGQPLFLKVGRSLEPTDA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQAT 127 S+ + M+ + L+ P + ++A ++ L + + P Sbjct: 61 AHSLAYQVRPIMEQLVMALESP-------RRLIVSAPEIVLQS-LPDMDDALLTESPAV- 111 Query: 128 IKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKD 187 +Y LD I GEVDI + ++ E L R D Sbjct: 112 ------EYQMLDKIRSGEVDILI----------DDITVTDYTFVTESLGKMDIAFACRND 155 Query: 188 HP-ALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAA 246 HP L + +L+ F + H+ + + + A + E+ ER I + L Sbjct: 156 HPTILGYSLSLEQFNQAEHVMLKLKNENVGAFETRPDEI-FERNIVREVSGPSNLLLSVR 214 Query: 247 QPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVW 306 D + + + Q L ++ P P L++H+RN N + Sbjct: 215 NTDAICIVAESMFG--LAQELGLKVLESPFPL-------QPYEIKLIYHRRNITNKTHKY 265 Query: 307 LRETIKNLYASM 318 +RE IK+ + + Sbjct: 266 IREQIKSRLSEL 277 >UniRef50_UPI0001826721 hypothetical protein EcanA3_12211 n=1 Tax=Enterobacter cancerogenus ATCC 35316 RepID=UPI0001826721 Length = 299 Score = 189 bits (482), Expect = 8e-47, Method: Composition-based stats. Identities = 61/301 (20%), Positives = 121/301 (40%), Gaps = 23/301 (7%) Query: 4 SITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLS 63 + DLNLL+ + + Q S++KAA+ + +TPSAVS+SL +LR +DPLF+ S G++ Sbjct: 6 DLKKFDLNLLVIFECIYQNLSISKAAETLYITPSAVSQSLQRLRNQLNDPLFIRSGKGIT 65 Query: 64 PTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMM-IMLNALSKQIYQR 122 PT + V++ +L + + ++ H + F + L I+L+ + + + Sbjct: 66 PTTVGVNLHHHLEQNLNQLEQTINIMHS-SGLKKNFVIYCPQILTPNILLDPIKLLMDKH 124 Query: 123 YPQATIKLRNWDYDSLDAITR-GEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPC 181 + + DS + + + D+ F+ + RS L ++ Sbjct: 125 NYEIELHDVMVSPDSAENLLAYRKADLVFAIAPVNNRSLACNLFHKLQMN---------- 174 Query: 182 VWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQS 241 + RK HP L + L + + S ++ ERT++ + Sbjct: 175 LVCRKGHPRLSVSPTRQDLLNEKFAAYLSDGSGVKTFQEKIEHALPERTVSFRSDSYLTI 234 Query: 242 LFMAAQPDNLLLATAPRYC-QYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 L M D L+ P + Y L ++ + V +L+++ + Sbjct: 235 LSMLTVSD--LVGVVPENAFRQYGDALGLKVLETDIAIPT-------VDIFMLYNRSALN 285 Query: 301 N 301 + Sbjct: 286 S 286 >UniRef50_Q1ZAV3 Transcriptional regulators, LysR family protein n=3 Tax=Vibrionaceae RepID=Q1ZAV3_PHOPR Length = 283 Score = 187 bits (477), Expect = 4e-46, Method: Composition-based stats. Identities = 51/306 (16%), Positives = 116/306 (37%), Gaps = 35/306 (11%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +DLNLL + + S+T AA+ ++V+ AVS +L +L + PLFV G+SPT Sbjct: 1 MDLNLLTTFMAVYKHTSITIAAEELDVSQPAVSAALKRLESVIGKPLFVREGRGISPTGA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQAT 127 V++ + + + + + ++L L + Sbjct: 61 AVALANKIESPITVLETIGQQQE-----------YLNVYCSEVVL-HLVCHVE----NIK 104 Query: 128 IKLRNWDYDS-LDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRK 186 + + + D + +VD+ S S + E + P R Sbjct: 105 LSETPLEEKAIFDDLFTQKVDLVIDVMSSKQHSLIV----------EEFHQEEPTCLTRL 154 Query: 187 DHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAA 246 DHP + L+ + H+++ +++T ++N+ ++ R + + L +++ Sbjct: 155 DHPRIQSQITLEEYFEEEHVAVKITRNNTNTINNLSEKPIEPRKVKIETCSLSSMLILSS 214 Query: 247 QPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVW 306 + D + ++ + L + P + +++H+R +++P Sbjct: 215 ESDYIA-SSPRSIAEKLAPKLNLRIHKYPFAI-------KPLKLYMIYHRRYANDPFHKT 266 Query: 307 LRETIK 312 RE ++ Sbjct: 267 KREALR 272 >UniRef50_A6U9H6 Transcriptional regulator, LysR family n=2 Tax=Sinorhizobium RepID=A6U9H6_SINMW Length = 340 Score = 187 bits (475), Expect = 6e-46, Method: Composition-based stats. Identities = 70/303 (23%), Positives = 118/303 (38%), Gaps = 28/303 (9%) Query: 23 RSV-TKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSMEQNLAEWMQM 81 ++V + AA+R+ V+PSAVS +LA+LR F DPLFV + G+ PT S+E++L+ + Sbjct: 33 KNVASLAAERLFVSPSAVSHALARLRTMFSDPLFVRTGSGMLPTARAQSLERSLSLLKAL 92 Query: 82 SN--------LLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQATIKLRNW 133 + P + + L + +L L+ + R PQ ++ + + Sbjct: 93 LAAELETDRVSATEVPFEPGESVRDVRIVSPGALELSLLPTLATMLRARAPQWSLTIEPF 152 Query: 134 DYDSLD-AITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPALH 192 + S + + G VD S + P + + + VL+ D V Sbjct: 153 ERRSYETDLATGRVDFVLSVGGTTPIGQLVDAD--------VLWEDEFVVLAGPRSVLHE 204 Query: 193 --QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQPDN 250 + + +L HI + LD L GR R IA S+P + ++ D Sbjct: 205 GFDRISTELYLAQQHIYPLPWPTSQNYLDVELARAGRHRKIAFSVPSYAALGYVLDTTDL 264 Query: 251 LLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWLRET 310 + L L+ L P + +LLW P I W+R Sbjct: 265 IASMPDRSARALMCCHPDLRLIHLDPP--------RKSQLSLLWGISALREPAISWVRTI 316 Query: 311 IKN 313 I+N Sbjct: 317 IRN 319 >UniRef50_B7S1T9 Transcriptional regulator, LysR family protein n=1 Tax=marine gamma proteobacterium HTCC2148 RepID=B7S1T9_9GAMM Length = 328 Score = 185 bits (471), Expect = 2e-45, Method: Composition-based stats. Identities = 55/301 (18%), Positives = 110/301 (36%), Gaps = 21/301 (6%) Query: 23 RSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSMEQNLAEWMQMS 82 RSV++AA+R+ +T SA+SK+L +LR FDD LFV G+ PTP + L E ++ Sbjct: 24 RSVSRAAERLYITQSAMSKTLGRLRDLFDDQLFVRRGSGMVPTPRAEQLGLTLPEVLRAV 83 Query: 83 NLLLDK-PHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQATIKLRNWDYDSLDAI 141 ++ L + + + L +L ++ Q P ++ + + + Sbjct: 84 QGMVQPLEFDPLAYKGHMNLLVQGHMGVWFLPSLITKLAQTAPGLKVRAYSRADQPFEQL 143 Query: 142 TRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPALHQTWNLDTFL 201 G +D P ++ L P + R+ HP + +D Sbjct: 144 ADGALDFALQVERL---------QYPKDLEISTLAFAQPVLLARRGHPLEGTEFGIDDVA 194 Query: 202 RYPHISICWEQSDTWALDN--VLQELGRERT--IAMSLPEFEQSLFMAAQPDNLLLATAP 257 RYP +++ L ER + + + ++ + +Q D L A P Sbjct: 195 RYPQVALLSTDLSELKFHEGNAAAILEYERRADPHVETDDLQTAVQIISQTDYLFPA-PP 253 Query: 258 RYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWLRETIKNLYAS 317 + + +N + + + + + H+R + + + + L Sbjct: 254 MFIEQFNLSRDM------VALPLPGVGAFAIKYVAVRHQRVLGSAPHEFFYQQVLELTEE 307 Query: 318 M 318 Sbjct: 308 F 308 >UniRef50_C1D8R3 Probable transcriptional regulator, LysR family n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1D8R3_LARHH Length = 273 Score = 184 bits (469), Expect = 3e-45, Method: Composition-based stats. Identities = 48/243 (19%), Positives = 92/243 (37%), Gaps = 19/243 (7%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 +DLNLL+ L L+QERSV+ AAKR+ + A+S +LA+LR D + S + P Sbjct: 9 FRQIDLNLLVALDALVQERSVSGAAKRLFIGQPAMSHALARLRELLGDEILFRSHGRMEP 68 Query: 65 TPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQIYQR 122 T +++ + ++ + L P + +A + L +L +L + + Sbjct: 69 TCRALTIAAEIRPFLLRIDALTRGQPEFDPVTVVQEMRIALSASLESCLLPSLVEHLRTH 128 Query: 123 YPQATIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPC 181 P + +++ L+ + GEV + + +L E+L Sbjct: 129 APGLQLSVQSGGPLRQLELLQHGEVRLAI----------DHFPALENDFIGELLGHVPYD 178 Query: 182 VWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRE------RTIAMSL 235 + L + + L PHI + + D +L +++ Sbjct: 179 CVFNPERVPLGENPGIHEILAQPHIHSTYAGATLSRFDQMLGRAQLASATYRGPQCQLAV 238 Query: 236 PEF 238 F Sbjct: 239 HSF 241 >UniRef50_A6CX36 Transcriptional regulator n=1 Tax=Vibrio shilonii AK1 RepID=A6CX36_9VIBR Length = 308 Score = 184 bits (468), Expect = 4e-45, Method: Composition-based stats. Identities = 62/319 (19%), Positives = 129/319 (40%), Gaps = 26/319 (8%) Query: 1 MKKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPL 60 M + +DLNL + + S+++AA+ +NVTP++VS+S+ KL + LF+ Sbjct: 5 MTQYSDKIDLNLFRTFATVYKHDSISRAAEELNVTPASVSQSIKKLSIELNTSLFMRRGR 64 Query: 61 GLSPTPLMVSMEQNLAEWMQMSNLLLDK----PHHQTPRGLKFELAAES--PLMMIMLNA 114 G++PT + + +A + +++ + H TP K + A I Sbjct: 65 GITPTLQAHHLIERIAPLLHEFDVITNDCLYGVHQSTP--RKVVVQAPEPIIFEHIKSTE 122 Query: 115 LSKQIYQRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEV 174 L+ R+ + + + DS + + D ++ I ++ Sbjct: 123 LANHTETRFRLEWLDILYSNSDSYETLKFKHADAII----------DIFQLAEPNICNDL 172 Query: 175 LFSDVPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMS 234 LF D V K+HP + T + + F HI + ++ ++ + + +R I + Sbjct: 173 LFEDEIVVIASKNHPRVGSTISPEQFAEESHIILNYQFGESSLFEMLYNSPPPKRRILST 232 Query: 235 LPEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLW 294 L + ++ + L L T R+ + + + ++ P P + V F L++ Sbjct: 233 QTSLTSMLSLTSESEALCLCT-RRFAEQHANRLPIKILPFPGPVE-------PVKFWLIY 284 Query: 295 HKRNSHNPKIVWLRETIKN 313 ++ I WL T+ + Sbjct: 285 PAQSRDTHAIKWLHSTLVD 303 >UniRef50_Q7VQS7 LysR-family transcriptional regulator n=2 Tax=Candidatus Blochmannia RepID=Q7VQS7_BLOFL Length = 307 Score = 184 bits (468), Expect = 4e-45, Method: Composition-based stats. Identities = 71/291 (24%), Positives = 118/291 (40%), Gaps = 21/291 (7%) Query: 21 QERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSMEQNLAEWMQ 80 ++ SV AAK++NVT A+SKSL K+R F+D + V S L+PTP +++++N+ + + Sbjct: 17 EDNSVNLAAKKLNVTAPAISKSLNKIRILFNDQILVRSGTKLTPTPKAMALKENIKDLVN 76 Query: 81 MSNLLLDKPHHQTP--RGLKFELAAESPLMMIMLNALSKQIYQRYPQATIKLRNWDYDSL 138 L++ P F +A+ S + + L + I P I L N Sbjct: 77 QIETLINSNIVFEPKYTNTSFTIASNSSIFFALNTILFRDIQSNTPNIFINLVNDSDYDD 136 Query: 139 DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPALHQTWNLD 198 D + +D+ + SL I ++ C+ R HP L + N+D Sbjct: 137 DFLRNNTIDLYVG----------EMRSLNPEITIRTIYMSKSCLICRNHHPILSKHKNMD 186 Query: 199 TFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQPDNLLLATAPR 258 L+YP I E D + ER I P++ ++ + +LA P Sbjct: 187 NLLKYPFIQTKHEYLINT--DETNKYFWSERNIVGITPDYITTINAVTHSN--ILAIIPN 242 Query: 259 YCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWLRE 309 Y PL FD ++ WH +N+ + WLR+ Sbjct: 243 YILTLTHQLNTPLSNFNPDFDLGKKN-----IIQAWHSKNNQSASHKWLRD 288 >UniRef50_A1WF12 Transcriptional regulator, LysR family n=1 Tax=Verminephrobacter eiseniae EF01-2 RepID=A1WF12_VEREI Length = 328 Score = 184 bits (468), Expect = 4e-45, Method: Composition-based stats. Identities = 47/297 (15%), Positives = 106/297 (35%), Gaps = 21/297 (7%) Query: 24 SVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSMEQNLAEWMQMSN 83 SV++ A+R++ T +VS+ L +LR DPL V S + T + L + +++ Sbjct: 20 SVSETARRLDSTQPSVSRMLERLRVELGDPLLVKSSNTMVRTTRANELRPLLDKVIELLQ 79 Query: 84 LLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQIYQRYPQATIKLRNWD-YDSLDA 140 + P R + A L + L + P A ++ + + + + Sbjct: 80 AVYRAPGDYRLRDERRTCTIGASDSLQAMFAMPLIATMRALAPNARLRFKPVPYPNPMRS 139 Query: 141 ITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPALHQTWNLDTF 200 + GE+D+ + + +VLF ++P + ++ Sbjct: 140 LLAGEIDLLLAMTDEENS----------GFRSDVLFKSSFSCMCAIENPHIGTRASIAAI 189 Query: 201 LRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQPDNLLLATAPRYC 260 P++ I + A D + + + ++ F + + A ++ P Y Sbjct: 190 AAMPYLEISHMGRISAATDAIFAVADKRKNTVAAMSSFLAAPGVIANS--PMICLVPDYL 247 Query: 261 QYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWLRETIKNLYAS 317 LH + +PL Q + ++WH + + +R ++ + + Sbjct: 248 ARTLGLHP-GVKVVPL-----QDDLKQHTIRMIWHNTTHFDAFLGAVRSLLQEIAKT 298 >UniRef50_B3Q4H2 Putative transcriptional regulator protein, LysR family n=3 Tax=Rhizobium etli RepID=B3Q4H2_RHIE6 Length = 263 Score = 184 bits (467), Expect = 4e-45, Method: Composition-based stats. Identities = 43/266 (16%), Positives = 88/266 (33%), Gaps = 28/266 (10%) Query: 62 LSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQI 119 + PT + + Q + + + L P F L +++ L+ ++ Sbjct: 1 MMPTARALELRQPIRQALAGMEEALATTAVFDPATSTRSFMLIGSDYFSTLLMPPLAARV 60 Query: 120 YQRYPQATIK-LRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSD 178 + P T++ + + + + + G DI P + + Sbjct: 61 AEAAPSVTLQMIDHASSEVFEMLRDGRADIVIDRSLEP----------PEWVASRKVLQS 110 Query: 179 VPCVWLRKDHPAL-------HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTI 231 ++ HP L D F PHI + S T +D L LG R + Sbjct: 111 WLVCIAKQGHPLLASHGLRPGDAIPADLFCAVPHILRSADGSRTGTIDPALARLGLARRV 170 Query: 232 AMSLPEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFT 291 +++P F+ + L + + + +L + P+ + + T Sbjct: 171 MVTVPHFQAVALAVESSEMLG-SIPVHFARTLIGRLKLDVFMPPMESPK-------MDVT 222 Query: 292 LLWHKRNSHNPKIVWLRETIKNLYAS 317 + W +R +P WLR I + A+ Sbjct: 223 MYWLRRFDRDPGSAWLRSEIAHALAA 248 >UniRef50_Q7NZ43 Probable transcription regulator protein, LysR family n=1 Tax=Chromobacterium violaceum RepID=Q7NZ43_CHRVO Length = 327 Score = 182 bits (464), Expect = 1e-44, Method: Composition-based stats. Identities = 64/315 (20%), Positives = 104/315 (33%), Gaps = 23/315 (7%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 + LDLN L+ L L+ RSV+++A + + AVS L KLR DPL GL+ Sbjct: 17 LRRLDLNSLVALHALLSTRSVSRSADLLCLGQPAVSHILKKLREQCGDPLLCRDGRGLTT 76 Query: 65 TPLMVSMEQNLAEWMQMSNLLLDKP-HHQTPRGLKFELAAESPLMMIMLNALSKQIYQRY 123 TP ++ L W+ + LL P + LA L +L L + Q+ Sbjct: 77 TPYAEALLPALEAWLGEAQRLLAPPAFDPAALDGVYRLAMPDLLEAALLPELIAALQQQA 136 Query: 124 PQATI-KLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCV 182 P + ++ A+ +D + + LF Sbjct: 137 PGLRLEVAAMAADEAEAALEARRIDGAVG----------HFPARSARLSRRELFRSGFVC 186 Query: 183 WLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 AL + PH+ + + +D+ L G+ R + S Sbjct: 187 LHHAGRLALPAALDAAALAGPPHLYTSYIGNSASLIDDYLAAHGQRRRVIASTASLLAIP 246 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 + + +A P + L P+ LE+ +WH R +P Sbjct: 247 LLLER--LPAVAVLPALIGRVLRAEAGGLTLRPV-----SDAALEIAVEHVWHPRCDADP 299 Query: 303 KIVWLRETIKNLYAS 317 LR I L Sbjct: 300 ----LRRFIDALLRR 310 >UniRef50_O69616 NodD protein (Fragment) n=1 Tax=Mesorhizobium sp. HAMBI1487 RepID=O69616_9RHIZ Length = 235 Score = 181 bits (461), Expect = 2e-44, Method: Composition-based stats. Identities = 42/246 (17%), Positives = 93/246 (37%), Gaps = 14/246 (5%) Query: 28 AAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSMEQNLAEWMQMSNLLL- 86 AA+ IN++ A+S ++A+LR +F D LF L TP + + + + + Sbjct: 1 AARSINLSQPAMSAAMARLRGYFQDELFTMRGRKLLATPRAEMLAPAVRGILLQLQISVL 60 Query: 87 -DKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQATIKLRNWDYDSLDAITRGE 145 T +F + + ++ + +++ + P L + +A+ RG+ Sbjct: 61 CQSAFDPTQSDRRFRVMVSDFMTLVFFRKVVERVARDAPSVAFDLVSPADAGEEALRRGD 120 Query: 146 VDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPALHQTWNLDTFLRYPH 205 +D + L A +LF D + L+ ++ + ++ H Sbjct: 121 LDFLILPD----------AFLSNAHPKAILFEDTLVCVGCSSNEELYGPFSFEKYMAMGH 170 Query: 206 ISICWEQSDTWAL-DNVLQELGRERTIAMSLPEFEQSLFMAAQPDNLLLATAPRYCQYYN 264 + + A+ D+ L G ER + +++P F M + + R +++ Sbjct: 171 VVTRFGNPHRPAVEDSSLLGFGMERRVEVTVPSFSSIPPMLSGTRRIA-TIPLRLVKHFA 229 Query: 265 QLHQLP 270 + L Sbjct: 230 AMMPLK 235 >UniRef50_Q1T7B6 Putative LysR-type transcriptional activator n=1 Tax=Pseudomonas sp. HI-70 RepID=Q1T7B6_9PSED Length = 312 Score = 180 bits (459), Expect = 4e-44, Method: Composition-based stats. Identities = 63/307 (20%), Positives = 113/307 (36%), Gaps = 19/307 (6%) Query: 4 SITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLS 63 + +DLNLLL + +RS+T+AA+ + ++ A+S +L++LR+ D LF+ S G++ Sbjct: 11 DLRQIDLNLLLAFDAIYAQRSITRAAEVMCLSQPAMSNALSRLRSLSGDRLFIKSHRGVT 70 Query: 64 PTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRY 123 PT + + ++ + L + ++ L +L AL + Q + Sbjct: 71 PTMVAHRLADHVRNALDSLREGLREIPSAHEHNPVLRISCPDYLQPQLLKALIDE-QQNH 129 Query: 124 PQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVW 183 + D+ D + G++DI + R L L D Sbjct: 130 WHVR-YYQTRRRDAFDELASGKLDILVDIDQPLQRHTMLRKLLLPV--------DHYVFA 180 Query: 184 LRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 L+ +L P I + + +D L R RTIA+SL + Sbjct: 181 Y--GQALDAPPLTLEAYLAIPQIQVSSRRDGLSPVDLKLGVTARRRTIAVSLQSSFAA-R 237 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 + A L R L L PLPF++ + +L + + S Sbjct: 238 VIADQHPFGLTLPSRVA------DALGLQQAPLPFEQPLELQLALYVEAKYRFERSREQA 291 Query: 304 IVWLRET 310 + L Sbjct: 292 LRLLLGL 298 >UniRef50_P77746 Uncharacterized HTH-type transcriptional regulator ybdO n=94 Tax=Enterobacteriaceae RepID=YBDO_ECOLI Length = 300 Score = 180 bits (458), Expect = 5e-44, Method: Composition-based stats. Identities = 52/284 (18%), Positives = 107/284 (37%), Gaps = 18/284 (6%) Query: 1 MKK--SITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNS 58 M + DLNLL+ + + Q S++KAA+ + +TPSAVS+SL +LRA F+DPLF+ S Sbjct: 1 MANLYDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRS 60 Query: 59 PLGLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQ 118 G++PT +++ +L + ++ ++ + + F + + + L + Sbjct: 61 GKGIAPTTTGLNLHHHLEKNLRGLEQTINIVNK-SELKKNFIIYGPQLISCSNNSMLIRC 119 Query: 119 IYQRYPQATIKLRNW---DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVL 175 + Q I+ + ++ + + + D+ + RS + L Sbjct: 120 LRQDS-SVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMP----------L 168 Query: 176 FSDVPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSL 235 + + HP + + + + + + + + E R I+ Sbjct: 169 HTIRNTLICSNRHPRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRG 228 Query: 236 PEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFD 279 + A D L + Y L + L P Sbjct: 229 SSLLTIINSIAVTDLLGIV-PYELYNSYRDFLNLKEIKLEHPLP 271 >UniRef50_UPI0001907B05 LysR family transcriptional regulator n=1 Tax=Rhizobium etli IE4771 RepID=UPI0001907B05 Length = 268 Score = 179 bits (455), Expect = 1e-43, Method: Composition-based stats. Identities = 40/280 (14%), Positives = 86/280 (30%), Gaps = 22/280 (7%) Query: 39 VSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSMEQNLAEWMQM-SNLLLDKPHHQTPRGL 97 +S ++ +LR F DPLFV ++ T + + E + + + T Sbjct: 1 MSYTIERLRRAFGDPLFVRQGNSIAETDKCRDLVSHAREVVNRMLAIAVPVEFDPTTAQG 60 Query: 98 KFELAAESPLMMIMLNALSKQIYQRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHP 157 L+ +++ + + + P I + + + DI Sbjct: 61 GVTLSCNHHERFLLMPSFIAAMRRLAPNVVINILESAVNGKQQLKENIADIVLGP----- 115 Query: 158 RSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWA 217 + L +FSD + + L+ F H+++ Sbjct: 116 -----VRILGEGYFRRHIFSDHYSCVMDPGNALAKGEITLERFQGATHVAVTHNGQWQAL 170 Query: 218 LDNVLQELGRERTIAMSLPEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLP 277 + L+E ++LP + M D L+ R Y +L + P+ Sbjct: 171 YFSALRERDILLKPQLTLPSHDSLELMITGTD-LVATIPNRLATAYAG--RLTVRRFPIQ 227 Query: 278 FDESQQKKLEVPFTLLWHKRNSHNPKIVWLRETIKNLYAS 317 + + W +R + W R+ + ++ S Sbjct: 228 IP--------IEIDMYWTERTHRSGLHRWARQLLADVARS 259 >UniRef50_A6AR16 Transcriptional regulator n=10 Tax=Vibrionaceae RepID=A6AR16_VIBHA Length = 308 Score = 179 bits (455), Expect = 1e-43, Method: Composition-based stats. Identities = 65/322 (20%), Positives = 132/322 (40%), Gaps = 22/322 (6%) Query: 1 MKKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPL 60 M + LDLNL+ L+ +++ RS+ AA ++ ++ + S+ + KL+ FDDPLFV Sbjct: 1 MPHQLDALDLNLMRLLKAVVENRSIKLAAMQLGISQPSASRGVMKLKDVFDDPLFVRKAH 60 Query: 61 GLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAE--SPLMMIMLNALSKQ 118 G+ P+P+ + + + ++ + P + ++A LM L + Sbjct: 61 GVEPSPMAIRLAAEFDNMLSPLEKVVQEFSEFDPLEYQGQIAIVTDPYLMDEQGQRLLRG 120 Query: 119 IYQRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSD 178 +Q +PQA+ +W+ S D + GE D + + L I LF + Sbjct: 121 CHQAFPQASFAFSSWNIYSQDEMLEGEHDYCI---------LDQETELSKDIYMRPLFVE 171 Query: 179 VPCVWLRKDHPALHQ-TWNLDTFLRYPHISICWEQSDTWA--LDNVLQELGRERTIAMSL 235 + RKDHP L Q + + DT + P +S+ S +++ + +G E + + Sbjct: 172 KRVILARKDHPTLSQISNDWDTVSKLPLVSLPAPASYNPLCTVESEYRRMGYEPVVLLKS 231 Query: 236 PEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWH 295 + M + D ++ Y L + P+P + + + + Sbjct: 232 YNLRVACQMLLETDAIM------YASQSTAHLMHELASYPMPMVNREFSQ--FVVSGGYL 283 Query: 296 KRNSHNPKIVWLRETIKNLYAS 317 + ++P L + ++ + Sbjct: 284 QTYRNHPLHRHLHQVVQQTLNT 305 >UniRef50_Q8KN32 Putative LysR type transcriptional regulator (Fragment) n=1 Tax=Sphingobium chlorophenolicum RepID=Q8KN32_SPHCR Length = 305 Score = 177 bits (451), Expect = 3e-43, Method: Composition-based stats. Identities = 53/282 (18%), Positives = 106/282 (37%), Gaps = 25/282 (8%) Query: 37 SAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG 96 S++S+ + LR F D LFV + G+ PT + +S+ +++ E + + + L + P+ Sbjct: 1 SSMSRYVQALREHFSDVLFVRTRNGMVPTSVALSVARSVEETLNVYHSSLSRRRKFDPQS 60 Query: 97 --LKFELAAESPLMMIMLNALSKQIYQRYPQATIKLRNWDYD-SLDAITRGEVDIGFSGR 153 F +AA + ++ + ++ + P + D + + G DI Sbjct: 61 SLRTFRVAASDLGQLYIVPLMQRRSVKNAPNIHFNPVSVRKDKLVSDLEMGIADIVLGN- 119 Query: 154 ESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPALHQTWNLDTFLRYPHISI--CWE 211 +L ++ + LF + + +L F HI + + Sbjct: 120 ---------FPALYASVREQTLFHEPYVCIAPAR-LVRNGQLSLSDFKSLYHIVVGASCQ 169 Query: 212 QSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPL 271 ++ + E+ R + ++ F S +A D L+ T P Q Q + Sbjct: 170 GHAHKEAEHRILEVIDPRRLRIATESFIVSALIAEVSD--LVLTVPLSVARVVQSSQAAI 227 Query: 272 VALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWLRETIKN 313 V P+ ++ WHKR H+P WLR + + Sbjct: 228 VRPPIDLP-------DIAIKQYWHKRFDHDPGHEWLRTLVSD 262 >UniRef50_C9QLU9 Regulatory protein LysR:LysR substrate-binding n=1 Tax=Vibrio orientalis CIP 102891 RepID=C9QLU9_VIBOR Length = 308 Score = 177 bits (451), Expect = 3e-43, Method: Composition-based stats. Identities = 55/320 (17%), Positives = 118/320 (36%), Gaps = 29/320 (9%) Query: 1 MKKSITTL---DLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVN 57 M +I + D NL++ L LL++ + V++ A I V+ SAVS+ L KLR F+D L V Sbjct: 1 MNMNIKLIVKHDQNLIITLYLLLKYKHVSRVADEIFVSQSAVSQQLNKLRRIFNDKLLVR 60 Query: 58 SPLGLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQ-TPRGLKFELAAESPLMMIMLNALS 116 + + TPL + L + + ++ P ++ + M ++ Sbjct: 61 TNNKMMLTPLSDKIFPQLENIFNSTFQIYNQLEGITQPTKEQYRICMIDGAMTNNSASVL 120 Query: 117 KQIYQRYP-QATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVL 175 I ++Y + ++ ++ + +G++D S L I + Sbjct: 121 ASISEKYEKKVKFEILGRYDGCVEDLNQGKLDFLVGN----------FSGLSNNIHQLKI 170 Query: 176 FSDVPCVWLRKDHPALH--QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAM 233 + +++RK+HP N+ Y +I + + + + + Sbjct: 171 GNYSYSIYVRKNHPLNKNEAPINIKETYSYGYIQFVYHGELIREFNRNVDRNEINQNTVL 230 Query: 234 SLPEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLL 293 + ++ + + D ++ P + L +L ++ + L Sbjct: 231 NFSQYSSIIDYLQETDY--VSLLPDVVAARSDLIKLNIIE----------ELTSGNSYLY 278 Query: 294 WHKRNSHNPKIVWLRETIKN 313 WH H+P +LR + Sbjct: 279 WHSLMEHDPFHRYLRARLFE 298 >UniRef50_B1KKV9 Transcriptional regulator, LysR family n=4 Tax=Shewanella RepID=B1KKV9_SHEWM Length = 317 Score = 177 bits (451), Expect = 3e-43, Method: Composition-based stats. Identities = 56/319 (17%), Positives = 118/319 (36%), Gaps = 24/319 (7%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 + DLNLL+ L +L++E VTKAAK + ++ SA+S+ L +LR F+DPL V S G+ Sbjct: 8 DQLKDCDLNLLIALSVLLKEAHVTKAAKELGLSQSAMSQVLKRLRLMFEDPLLVKSHNGM 67 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLD-KPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQ 121 + T ++E L + +L+ + + + L + + L ++ + Sbjct: 68 TLTSKATAIESELKPLLNRVISILEGDRFNPATAQGRIRVMMNDVLAQLCITQLISELDK 127 Query: 122 RYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVL--FSDV 179 P ++ D + RG +D+ +S P+ + L ++ Sbjct: 128 HAPGIELEYVTQKTDGFKMLRRGHLDLIVGFYDSVPKPIRSQAISRYPWQLVTLDPQAND 187 Query: 180 PCVWLRKDHPALHQ-TWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTI-AMSLPE 237 + + + + L + H + + N L+ + E A++ Sbjct: 188 YIDKIHNGQSIIEESPFKLLRYQYQEH--------NQAHMINALKAINAEEASYALTSGS 239 Query: 238 FEQSLFMAAQPDNLLLATAPRY-CQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHK 296 + P Y + + + + L +E+ + W++ Sbjct: 240 LSTMTQAL--TAPYTVTLLPHYSVKIFEKHKAEDFIWL--------GDTIELDLKVCWNE 289 Query: 297 RNSHNPKIVWLRETIKNLY 315 N + W R+ I ++ Sbjct: 290 HNRNLKLQKWFRQLISSIL 308 >UniRef50_C5BHM7 Transcriptional regulator, LysR family n=2 Tax=Edwardsiella RepID=C5BHM7_EDWI9 Length = 314 Score = 176 bits (448), Expect = 7e-43, Method: Composition-based stats. Identities = 65/321 (20%), Positives = 118/321 (36%), Gaps = 34/321 (10%) Query: 4 SITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLS 63 + DLNLL +++ SV++AA + TPSAVS+SL KLR FDDPLF+ + G+S Sbjct: 11 HLKGFDLNLLTVFEMVFLHNSVSRAAAAMGTTPSAVSQSLQKLRQHFDDPLFIRAGKGIS 70 Query: 64 PTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRY 123 PT L V + +A+ + + L+ R KF + A + + +L A + + Sbjct: 71 PTALGVCLHDQIAQGLSLIENTLNATLSAKQR-RKFVVFAPCCVALQVLPAAVSALERL- 128 Query: 124 PQATIKLRNWDYD--------SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVL 175 +L ++ + + + D+ FS + L Sbjct: 129 -GVGYELLHYSEYADYHPHTIAEQLLNFRKADVVFSTTPVTAHAVHCLPFA--------- 178 Query: 176 FSDVPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSL 235 ++ + R HP L + + + + Q D G + + Sbjct: 179 -NEPLALVCRDGHPRLGEACSEVQLSGERFVIL---QRAHSDGDRFAFLHGG--RVVLRS 232 Query: 236 PEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWH 295 F L + + D LL Y +L +V + L ++ Sbjct: 233 DSFISILGVVSHSD-LLTVLPREVALRYGASFKLRVVETAFAIP-------PISLYLTYN 284 Query: 296 KRNSHNPKIVWLRETIKNLYA 316 K + NP+ L + + + + Sbjct: 285 KLSLRNPEFRNLLDVLMDTVS 305 >UniRef50_A6B1R6 Transcriptional regulator n=1 Tax=Vibrio parahaemolyticus AQ3810 RepID=A6B1R6_VIBPA Length = 293 Score = 175 bits (445), Expect = 2e-42, Method: Composition-based stats. Identities = 51/309 (16%), Positives = 103/309 (33%), Gaps = 35/309 (11%) Query: 6 TTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPT 65 T+DLNL+ ++ S TKAA ++ VT A+S S+ +L LFV + G+ T Sbjct: 3 KTIDLNLIHTFLVVTDTLSYTKAAAQLGVTQPAISASIKRLEEASKKKLFVKNGRGIELT 62 Query: 66 PLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQ 125 + + + N L K ++ + + Sbjct: 63 STGQELLPKFFNAINIINDALSKSES-------LKVFCNDVS--------LQHLTSMD-N 106 Query: 126 ATIKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 + D ++L + + + D+ ++ S + E ++ + V Sbjct: 107 VVLNETTSDENALCELLHNRKADLIVGNVTNNQTSVLV----------EEIYREPLVVIC 156 Query: 185 RKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 RKDHP + ++DTF H + +++ L + I + + L Sbjct: 157 RKDHPRIGNRMDIDTFYNEKHCVLAMNWDLDKEVESSLNITLKTSQIELITSSYFGVLSN 216 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 + L + + P P + +HKR ++ + Sbjct: 217 VSHRYCLGVVPL-SLVINCGSAFDVKYFHSPFP-------NSTFKCQMAYHKRQANCLRH 268 Query: 305 VWLRETIKN 313 +RE++K Sbjct: 269 REIRESVKR 277 >UniRef50_A7N4D7 Putative uncharacterized protein n=1 Tax=Vibrio harveyi ATCC BAA-1116 RepID=A7N4D7_VIBHB Length = 212 Score = 175 bits (445), Expect = 2e-42, Method: Composition-based stats. Identities = 126/210 (60%), Positives = 166/210 (79%) Query: 108 MMIMLNALSKQIYQRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLP 167 M+ +L+ L I+QRYP A +K RNWDYDSLDAI RGE DIGF+GRES+PRS+E L LP Sbjct: 1 MLTILDELLIAIHQRYPDAKVKTRNWDYDSLDAIVRGEADIGFTGRESYPRSKESLDLLP 60 Query: 168 LAIDYEVLFSDVPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGR 227 +D+EVLFSD+P V+L K+HPAL Q WNL+TFL Y HI+I WE+S+TWALD VL ELG Sbjct: 61 YFLDFEVLFSDLPMVYLHKNHPALEQAWNLETFLSYQHINIVWEKSETWALDEVLSELGL 120 Query: 228 ERTIAMSLPEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLE 287 +R+I +++ FEQSLFMAAQP + +L TAP+Y + Y + LV LP+P +++QQ KL Sbjct: 121 QRSIGLTMSSFEQSLFMAAQPHHNMLTTAPQYGESYTKKLHPDLVCLPIPLEQTQQDKLL 180 Query: 288 VPFTLLWHKRNSHNPKIVWLRETIKNLYAS 317 +PFT++WHKRN++NPK+VWLR TIK+L++S Sbjct: 181 IPFTMIWHKRNAYNPKLVWLRNTIKSLFSS 210 >UniRef50_A3XSU7 Probable transcriptional regulator SyrB n=2 Tax=Gammaproteobacteria RepID=A3XSU7_9VIBR Length = 298 Score = 175 bits (444), Expect = 3e-42, Method: Composition-based stats. Identities = 61/300 (20%), Positives = 118/300 (39%), Gaps = 20/300 (6%) Query: 21 QERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSMEQNLAEWMQ 80 + R AAK +NV+ +S L KLR FDD LFV L PTP + + + L ++ Sbjct: 16 ETRQTVSAAKALNVSQPTISVMLRKLREQFDDELFVRDKARLEPTPKCLKLIETLPLLLE 75 Query: 81 MSNLLLDKPHH--QTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQATIKLRNWDYDSL 138 + L + ++ SPL++ + L K++ + PQ T + W + + Sbjct: 76 QLDNLYIPNDEWGLEDLRGEVQIMLPSPLLIPVGVPLIKKLTKEAPQVTFQCSPWLENGV 135 Query: 139 DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPALHQTWNLD 198 ++ + G S + + + D + LR DHP +L+ Sbjct: 136 QSLETNRMCWGVSYLPM---------EVNKTLTERPVGFDKFMLVLRADHPIQGN--SLE 184 Query: 199 TFLRYPH-ISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQPDNLLLATAP 257 L+YP I++ + ++++ ++ I + L + D + + ++ Sbjct: 185 DILKYPLCINMIPGYIQPSKAEMLIKKYDLDKHIGLRSNNMNLMLEVVKDSDFIYITSSK 244 Query: 258 RYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWLRETIKNLYAS 317 Y H + LP + ++ L H+ N +NP WL++ I ++ S Sbjct: 245 ---CRYLLDHCYRCIDLPPELLKDTYRR---ELALFTHQANRNNPFTDWLQKEITSIIQS 298 >UniRef50_B5EV06 Putative transcriptional regulator, LysR family n=1 Tax=Vibrio fischeri MJ11 RepID=B5EV06_VIBFM Length = 309 Score = 173 bits (440), Expect = 7e-42, Method: Composition-based stats. Identities = 63/305 (20%), Positives = 110/305 (36%), Gaps = 25/305 (8%) Query: 20 MQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSMEQNLAEWM 79 ++E+SVTK A+R+++ +VS+ L KLR DD LF++SP GL TP + L + Sbjct: 21 IEEKSVTKTAERLSLAQPSVSRQLRKLRDNLDDALFISSPKGLILTPRCEQIADVLPHLL 80 Query: 80 QMSNLLLDKPHHQTPR--GLKFELAAESPLMMIMLNALSKQIYQRYPQATIKLRNWDYDS 137 L P P LA L + + + + P+ W+ D+ Sbjct: 81 DTLYQTLSPPQEFDPAKKEGHISLAINPILGESLPAEICLLLAKYSPKVQFSCFLWNNDT 140 Query: 138 LDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPALH-QTWN 196 LD I ++ IG + + L D +++RK+HP L + + Sbjct: 141 LDKIETDQIYIGINYPIDFSNKL---------VRSSALIQDNFKIYVRKNHPLLKNKKIS 191 Query: 197 LDTFLRYPH--ISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQPDNLLLA 254 L YP + L+ + + + ++ D++ Sbjct: 192 LTELSIYPITTAILPKWNDKKGLLEKLFERENIDFVQGFRSEIMSNISQFVSKTDSIF-- 249 Query: 255 TAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS-HNPKIVWLRETIKN 313 P Y + H L S +E + + ++P + WL IK Sbjct: 250 --PVSELYIDSNHNLRT------IYHSNLPSIEAESIMFYSNYKDRNDPYLQWLYSKIKQ 301 Query: 314 LYASM 318 L S+ Sbjct: 302 LINSI 306 >UniRef50_D0ZGN3 Transcriptional regulator n=2 Tax=Edwardsiella RepID=D0ZGN3_EDWTE Length = 310 Score = 172 bits (438), Expect = 1e-41, Method: Composition-based stats. Identities = 68/323 (21%), Positives = 134/323 (41%), Gaps = 32/323 (9%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 K++ +D++++ +M RSVT AA+ ++ + +++S++L K+R F+DPLF+ + GL Sbjct: 12 KNMLDVDVSVIRTFLTVMDTRSVTLAAELLDSSTASISRALKKMRDAFNDPLFIRTKQGL 71 Query: 63 SPTPLMVSMEQNLAEWMQMSNLL---LDKPHHQTPRGLKFELAAESPLMMIMLNALSKQI 119 PT L ++ NLA+ + + H R + +L+ L L L + Sbjct: 72 EPTALAYNITPNLAQALNNIQNAANLTNGIHQGDRRQTRLKLSMSPLLEFY-LTRLLQH- 129 Query: 120 YQRYPQATIKLRNWDYD-----SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEV 174 YP ++ L +D + + ++DI F+ ++ + Sbjct: 130 -YHYPFDSVALMTETHDGDLTRDISRLRSRKIDISFTPQKYADWMITNVP---------- 178 Query: 175 LFSDVPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMS 234 +F P V R HP + + LD + ++S+ S D VL + S Sbjct: 179 VFDVQPAVLCRVGHPRIGPGFTLDQLAQEDYLSLTMWPSLFED-DEVLNPHRKAP--IYS 235 Query: 235 LPEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLW 294 + M A D +LL R+ Q + +L ++ ++ P Q + + Sbjct: 236 SSSLLNLMMMVASSDYILLC-GKRFAQEFARLVEIQVLDHP-------QGRSMGTIYAHY 287 Query: 295 HKRNSHNPKIVWLRETIKNLYAS 317 HK + +P I+ L + ++ Sbjct: 288 HKSRTTDPCIIELIDILRTRAGE 310 >UniRef50_C8T378 LysR family transcriptional regulator n=1 Tax=Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884 RepID=C8T378_KLEPR Length = 321 Score = 170 bits (431), Expect = 7e-41, Method: Composition-based stats. Identities = 54/286 (18%), Positives = 100/286 (34%), Gaps = 15/286 (5%) Query: 7 TLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTP 66 D N L + LM+ S AA+ I ++ SA+S+ + KL + LF + ++ T Sbjct: 26 NFDFNDLYAFRALMEYGSFRLAAESICLSQSALSRRIEKLETALGNRLFDRTTRRVTLTL 85 Query: 67 LMVSMEQNLAEWMQMSNLLLDKPHHQT-PRGLKFELAAESPLMMIMLNALSKQIYQRYPQ 125 + + + + +L + R +A + + + RYPQ Sbjct: 86 YGQNFAERSEQLLAHVETVLADISQVSKARTGLVTVATVPSAAYYFMPEIIRSFQARYPQ 145 Query: 126 ATIKLRNWD-YDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 I+L + + ++A++ G+ D G + +LP +I++ L D Sbjct: 146 VRIRLIDSSVGNVIEAVSSGQADFGLCFAK----------NLPASIEFTPLADDRYVAAC 195 Query: 185 RKDHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 R DHP +T + + +I + + LD L L R L Sbjct: 196 RHDHPLARKTHLSWQAYFEQDYIGLDRVSGNRTLLDRELAHLTPARPSICETRHVTTMLG 255 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVP 289 M + +A P + L V L P + + Sbjct: 256 MVEA--GIGIAAVPAMSMPAGEHSVLRAVPLTDPVVTRTVGLIRLS 299 >UniRef50_Q4KE95 Transcriptional regulator, LysR family n=7 Tax=Pseudomonas RepID=Q4KE95_PSEF5 Length = 303 Score = 169 bits (428), Expect = 1e-40, Method: Composition-based stats. Identities = 47/270 (17%), Positives = 92/270 (34%), Gaps = 14/270 (5%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +DL L + + + +AA+++N + A++KS+ +L F LF G+ T + Sbjct: 1 MDLRDLTYFDTIAELGHLGRAAQKLNRSQPALTKSIQRLEESFGTKLFEREGRGIKLTAV 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNALSKQIYQRYPQA 126 +++ + Q + L + + +L ++ + +R P Sbjct: 61 GELLQRRSRQLQQNIAETHREVRDFASGVLGNIRLGCAASMAEHLLPQMTATLLERAPDI 120 Query: 127 TIKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 T+ L D L +++ G +D+ + + LF D V Sbjct: 121 TLNLVIGQDDLLRESLRSGRLDMVICPMFEG----------DPHLSHHTLFEDRAVVVAS 170 Query: 186 KDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRE-RTIAMSLPEFEQSLFM 244 +DHP L Y + S +DNV Q ++ + + Sbjct: 171 RDHPIFATPMRLRDLCAYRWVLPGTRVSARRWIDNVFQSHELPLPSVQIETNTISLLPRL 230 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVAL 274 A+ LL A + + L V L Sbjct: 231 IAKT-GLLSFLARETLDDFKGIAHLREVPL 259 >UniRef50_B9JIM7 Transcriptional regulator protein n=12 Tax=Proteobacteria RepID=B9JIM7_AGRRK Length = 306 Score = 169 bits (428), Expect = 2e-40, Method: Composition-based stats. Identities = 47/264 (17%), Positives = 98/264 (37%), Gaps = 20/264 (7%) Query: 1 MKKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPL 60 M + LD L Q +++ S +AA+ ++++ A+++ + KL PL + Sbjct: 1 MSINCEILD---LRAFQAVVELESFHRAAEALHISQPALTRRIQKLEQSIGAPLLDRTTR 57 Query: 61 GLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGLK--FELAAESPLMMIMLNALSKQ 118 ++PT M + ++ + L + + +A L + + Sbjct: 58 HVAPTATGQEMIPLVRRMLEEFDGSLFAIKD-SGSQRRGLITMACVPTAAFYFLPTVIRT 116 Query: 119 IYQRYPQATIKLRNWD-YDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFS 177 + YP +++R+ + L A+ RGEV+ G + L+ + + +E L Sbjct: 117 FGRDYPHIRLRIRDLTANEGLQAVARGEVEFGIN----------LMGNSDPDLSFEPLID 166 Query: 178 DVPCVWLRKDHPALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLP 236 D + +RKDHP + + +P + + + LD L + Sbjct: 167 DPFVLAMRKDHPLAAFDEIHWNQLEGHPLVVVDRSSGNRTLLDAALARANLRLNWFYEVT 226 Query: 237 EFEQSLFMAAQPDNLLLATAPRYC 260 SL + L ++ PR Sbjct: 227 HLNTSLGLVEA--GLGISVLPRLA 248 >UniRef50_A6AYH0 Transcriptional regulator n=3 Tax=Vibrio parahaemolyticus RepID=A6AYH0_VIBPA Length = 284 Score = 168 bits (426), Expect = 3e-40, Method: Composition-based stats. Identities = 55/317 (17%), Positives = 109/317 (34%), Gaps = 41/317 (12%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 + LDLNL+ + + +S TKAA+ + VT AVS S+ +L A + LF + Sbjct: 1 MTNKKLDLNLIQTFLIAAEYQSYTKAAEHLGVTQPAVSASIRRLEALIEYQLFTKVGRSI 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQR 122 S T ++ L + + M L F++ + I Sbjct: 61 SLTSRGQNLLPKLRQALCMVENALSTSPQ-------FKVYCSEVFSGSL-----SSIN-- 106 Query: 123 YPQATI-KLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPC 181 ++ + L+ + + ++ + + S + EV+ + Sbjct: 107 --NVSVHEAVATKNLLLELLHQQKIALVIDS----------IKSDDSTLVNEVIHEEPNV 154 Query: 182 VWLRKDHPALHQTWNLDTFLRYPHISICWEQ--SDTWALDNVLQELGRERTIAMSLPEFE 239 V RK HP ++ N F + H + E + T + L + + Sbjct: 155 VVCRKTHPRINGQINTKQFFKEKHCVLTEEWAVNQTTNHNQYLNNV----QVETVASSLS 210 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 + + DN+ + + + + L ++ LP+ V + ++HKR Sbjct: 211 GVVLNVIESDNIAI-IPHSFAMKWKEQLDLQVIDLPIE-------SNLVTYHFIYHKREK 262 Query: 300 HNPKIVWLRETIKNLYA 316 +N +R IK Sbjct: 263 NNLHHKRIRNNIKETLK 279 >UniRef50_A6B1R3 Transcriptional regulator, LysR family n=2 Tax=Vibrio harveyi group RepID=A6B1R3_VIBPA Length = 314 Score = 167 bits (425), Expect = 3e-40, Method: Composition-based stats. Identities = 52/239 (21%), Positives = 90/239 (37%), Gaps = 13/239 (5%) Query: 20 MQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSMEQNLAEWM 79 E+S +K A+R+ VT SA+SK L KLR +DPLFV S G PT + + + Sbjct: 22 YDEQSTSKTAERLFVTQSAISKGLRKLREQLNDPLFVRSRDGFVPTEKCSDLVSKIGPLL 81 Query: 80 QMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQIYQRYPQATIKLRNWDYDS 137 + + + +A S + + + Q+ +P ATI++ NW + Sbjct: 82 TELENVYSDSSQLLTKDYAGELSIAISSAMYFALSETIYLQLKNDFPSATIRIVNWSEST 141 Query: 138 LDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPALHQTWNL 197 I ++ IG + + + E L RKDHP Q L Sbjct: 142 EQQILNTKIHIGINYHPID---------VSKDLVSEPLLPVSFNFIARKDHPLSQQLVCL 192 Query: 198 DTFLRYPHIS-ICWEQSDT-WALDNVLQELGRERTIAMSLPEFEQSLFMAAQPDNLLLA 254 + R+P + + + +++ L +L I + L + L+ Sbjct: 193 EDISRFPLVVSVIPNFTTKNSKIEHTLHKLKLRSNIVLRSDNANLCLSTLKDSNALMPV 251 >UniRef50_Q0SYQ0 Putative transcriptional regulator LYSR-type n=1 Tax=Shigella flexneri 5 str. 8401 RepID=Q0SYQ0_SHIF8 Length = 200 Score = 167 bits (423), Expect = 7e-40, Method: Composition-based stats. Identities = 181/186 (97%), Positives = 184/186 (98%) Query: 32 INVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSMEQNLAEWMQMSNLLLDKPHH 91 +NVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPT LMVSMEQNLAEWMQMSNLLLDKPHH Sbjct: 1 MNVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTQLMVSMEQNLAEWMQMSNLLLDKPHH 60 Query: 92 QTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQATIKLRNWDYDSLDAITRGEVDIGFS 151 QTPRGLKFELAAESPLMMIMLNALSK+IYQRYPQATIKLRNWDYDSLDAITRGEVDIGFS Sbjct: 61 QTPRGLKFELAAESPLMMIMLNALSKRIYQRYPQATIKLRNWDYDSLDAITRGEVDIGFS 120 Query: 152 GRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPALHQTWNLDTFLRYPHISICWE 211 GRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPALH+TWNLDTFLRYPHISICWE Sbjct: 121 GRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPALHETWNLDTFLRYPHISICWE 180 Query: 212 QSDTWA 217 QSDTW Sbjct: 181 QSDTWV 186 >UniRef50_Q46WQ0 Transcriptional regulator, LysR family n=1 Tax=Ralstonia eutropha JMP134 RepID=Q46WQ0_RALEJ Length = 304 Score = 166 bits (422), Expect = 8e-40, Method: Composition-based stats. Identities = 53/310 (17%), Positives = 100/310 (32%), Gaps = 22/310 (7%) Query: 7 TLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTP 66 + L L + QER T+AA++++++ S+VS + +L LF L T Sbjct: 8 NVSLRQLRAFIAVAQERHFTRAAEKLDLSQSSVSALIHELEDNLGLKLFDRHTRQLHITQ 67 Query: 67 LMVSMEQNLAEWMQMSNLLLDKPHHQTPRGL-KFELAAESPLMMIMLNALSKQIYQRYPQ 125 + + + + + ++ G + +AA S +ML ++ +P Sbjct: 68 AGEELLPLVKKAVADIDSAIETSSELRTLGRGRVSIAASSIQAALMLPRFIREFSLGHPG 127 Query: 126 ATIKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 + + + + ++ GEVD G + L +D + + Sbjct: 128 VKVDIHDVSEHEVPKMVSSGEVDFGIGTIPEGQ----------PDLTAHRLSTDPFVIVM 177 Query: 185 RKDHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 DHP L +T + P I LD L G + + + Sbjct: 178 PPDHPLLRRKTLRWEDVAPIPLIGPHKGNPIRDCLDTALAARGITLSRLHEVLLPLTMVG 237 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 M L +A + L V P + +LL H S +P Sbjct: 238 MVEA--GLGIAVMSAAVTRLTEALGLATVMPTDPV-------IHREISLLVHADRSLSPP 288 Query: 304 IVWLRETIKN 313 R+ + Sbjct: 289 AQRFRDLLMR 298 >UniRef50_Q0K6D4 Transcriptional regulator, LysR-family n=2 Tax=Cupriavidus RepID=Q0K6D4_RALEH Length = 301 Score = 165 bits (418), Expect = 2e-39, Method: Composition-based stats. Identities = 54/316 (17%), Positives = 102/316 (32%), Gaps = 22/316 (6%) Query: 7 TLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTP 66 + L L + QER T+AA++++++ S+VS + +L LF L T Sbjct: 2 NVSLRQLRAFIAVAQERHFTRAAEKLDLSQSSVSALIHELEGNLGLKLFDRHTRQLHITQ 61 Query: 67 LMVSMEQNLAEWMQMSNLLLDKPHHQTPRGL-KFELAAESPLMMIMLNALSKQIYQRYPQ 125 + + + + + +++ G + ++A S +ML + ++ +P Sbjct: 62 AGAELLPLVKKAVADIDSVIENSSELRTLGRGRVSISASSIQAALMLPRVIREFCVSHPG 121 Query: 126 ATIKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 ++L + + ++ GEVD G + L SD + + Sbjct: 122 VKVELHDVSEHEVTKMVSSGEVDFGIGTIPEGQ----------PDLSAHRLMSDPFVIVM 171 Query: 185 RKDHPA-LHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 HP +T + P I LD L G + + Sbjct: 172 PAHHPLRRRKTLRWEDVAGLPVIGPHKGNPIRDCLDTALAARGISLQRVHEVFLPLTMVG 231 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 M L +A L V P + +LL H S +P Sbjct: 232 MVDA--GLGIAVMSAAVTRLTSALGLATVMPTDPV-------IHREISLLVHADRSLSPP 282 Query: 304 IVWLRETIKNLYASMA 319 R+ + A +A Sbjct: 283 AQAFRDLLMRYRAKLA 298 >UniRef50_C9PJ12 Putative transcriptional regulator protein n=1 Tax=Vibrio furnissii CIP 102972 RepID=C9PJ12_VIBFU Length = 308 Score = 165 bits (418), Expect = 2e-39, Method: Composition-based stats. Identities = 51/270 (18%), Positives = 91/270 (33%), Gaps = 16/270 (5%) Query: 7 TLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTP 66 + L L +ER+ T AA ++++T SA+S+ + KL LF + T Sbjct: 2 DISYRQLKAFIALAEERNFTYAADKVHITQSALSQMMKKLAQQLSCELFERKGRTIVLTE 61 Query: 67 LMVSMEQNLAEWMQMSNLLLDKPHHQTP-RGLKFELAAESPLMMIMLNALSKQIYQRYPQ 125 + Q + L+ + H + +++ L + + +RYP Sbjct: 62 AGHHLYQEARFIVNRLEKLVQENHDRQHGYNKSLVVSSLYTLCASLAPKTLNDLKKRYPD 121 Query: 126 ATIKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 T +L D + ++ G DIG + +H +++++LF D C Sbjct: 122 FTFRLIEERVDDITHSVLEGRADIGINTNPNH-----------PDLNFDLLFRDSLCFVC 170 Query: 185 RKDHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 R DHP Q + + +Y I + S D +G S L Sbjct: 171 RADHPLAEQQDISWEQAHQYATIGVSPGNSLRTLADEAFSRVGLTYDPEFSASHTSTLLG 230 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVA 273 M A L N + + Sbjct: 231 MIAS--GLGSTILSSTIAGLNASDTIRFIP 258 >UniRef50_B7X0F3 Transcriptional regulator, LysR family n=1 Tax=Comamonas testosteroni KF-1 RepID=B7X0F3_COMTE Length = 307 Score = 164 bits (417), Expect = 3e-39, Method: Composition-based stats. Identities = 57/276 (20%), Positives = 107/276 (38%), Gaps = 18/276 (6%) Query: 1 MKKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPL 60 M+ ++T L L + + RS T AA +++T SAVSK A+L + PLF + Sbjct: 1 MRMNVT---LRQLRVFCAVYERRSFTSAADDMHMTQSAVSKLCAELESEIGLPLFERTTR 57 Query: 61 GLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTP-RGLKFELAAESPLMMIMLNALSKQI 119 ++P + + E + L + +AA +M +L + + Sbjct: 58 RVTPCDGAAELYEYAQEVLNTMRLAGRRLSALRTLDQGNLSIAASPMMMSGLLAPVIEAF 117 Query: 120 YQRYPQATIKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSD 178 + +P+ I L D S+D + G D G ++ ++ +V+ ++ Sbjct: 118 ARDHPKVRIDLHELTTDESVDYVRTGRCDFGL----------VSIAEHDPQLEPKVVCAE 167 Query: 179 VPCVWLRKDHPA-LHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPE 237 + C+ HP + YPHI++ S +D +L+ G E + Sbjct: 168 LLCLACTPSHPLAAKKRITWGEASDYPHITLRSVYSTRKTIDRILKAQGLELRSTIQAGT 227 Query: 238 FEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVA 273 SL + NL + P Y + + Q L ++ Sbjct: 228 LATSLRLVKA--NLGVTLIPSYAREFAQDLGLKVME 261 >UniRef50_Q475G5 Regulatory protein, LysR:LysR, substrate-binding n=9 Tax=Betaproteobacteria RepID=Q475G5_RALEJ Length = 304 Score = 164 bits (416), Expect = 4e-39, Method: Composition-based stats. Identities = 47/308 (15%), Positives = 96/308 (31%), Gaps = 23/308 (7%) Query: 10 LNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMV 69 L L + + ++AA + +T SA+S+ +A+L L + + T Sbjct: 5 LRQLRVFLAVAETGGFSRAADAVGLTQSAISRGVAELEESLGVRLLDRTTREVVLTHAGQ 64 Query: 70 SMEQNLAEWMQMSNLLLDKPHHQ-TPRGLKFELAAESPLMMIMLNALSKQIYQRYPQATI 128 ++ L + + L+ + +A + ++ +YP+ + Sbjct: 65 ALAPALERLLGQLDDTLEDTRELGEHYRGRVVIAGAPTISARLMPMYVAACAAQYPEIRL 124 Query: 129 KLR-NWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKD 187 +R N D ++ + G VD G + + E L +D C R+D Sbjct: 125 TVRDNVQADGIEQVRAGGVDFGVLIDPL----------VHDGLTIEPLVTDPFCFVCRRD 174 Query: 188 HPALHQ-TWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAA 246 HP + T + + + +D V G + L M Sbjct: 175 HPLAQEKTVPWSALDGMRLVLLDFASGSRPLIDRVFGRHGIVPRVVQELGHSASVFGMVE 234 Query: 247 QPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVW 306 + + P Y L L + E ++ + S +P Sbjct: 235 A--GIGASVLPTYSLPLPAASPLVWRPL--------VPREERRIVMVRREDRSLSPAAEA 284 Query: 307 LRETIKNL 314 + ++NL Sbjct: 285 VWALVRNL 292 >UniRef50_C5B901 Transcriptional activator, LysR family n=74 Tax=Proteobacteria RepID=C5B901_EDWI9 Length = 360 Score = 163 bits (414), Expect = 6e-39, Method: Composition-based stats. Identities = 45/297 (15%), Positives = 100/297 (33%), Gaps = 17/297 (5%) Query: 2 KKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLG 61 + ++ + L + +M ++T+AA ++ + VS+ LA+ LF Sbjct: 47 EPTMHRISLRQVAIFHAVMTSGNLTEAATQLRTSQPTVSRELARFEQLLALKLFDRVRGR 106 Query: 62 LSPTPLMVSMEQNLAEW---MQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQ 118 L PT + + + + ++ + R ++ +L + ++ Sbjct: 107 LRPTAQGLQLFEEVQRAYCGLERIEDAASQIRQF--RRATLDIVCLPAFSQSLLPQVCRR 164 Query: 119 IYQRYPQATIKLRNWDYDSLDA-ITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFS 177 + YP+ ++ + + L+ ++ D+G + S P + L + Sbjct: 165 FLECYPEVSLTITPQESPLLEEWLSAQRYDLGLTEE----------CSTPPGCERHALAT 214 Query: 178 DVPCVWLRKDHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLP 236 + DHP LH F P+IS+ S LD + Q G R + Sbjct: 215 LNEVCVMPADHPLLHHAILTPAHFAAQPYISLSAGDSYRHTLDALFQRAGVARRMVAETH 274 Query: 237 EFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLL 293 + Q L + + + ++ +PF S + P + + Sbjct: 275 SAAAVCALVRQGIGLSIVNPLTALDFVGRGLAWRPFSVAVPFTVSLIRPRHRPGSAV 331 >UniRef50_Q39IT2 Transcriptional regulator, LysR family n=8 Tax=Burkholderia RepID=Q39IT2_BURS3 Length = 309 Score = 163 bits (414), Expect = 7e-39, Method: Composition-based stats. Identities = 46/314 (14%), Positives = 102/314 (32%), Gaps = 20/314 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +DL L +++ +VT A++ ++V AVS+ + L L S G++PT Sbjct: 1 MDLRQLRYFVKVVECGNVTHASEALHVAQPAVSQQMRNLEQDLGMQLLERSVRGVAPTAA 60 Query: 68 MVSMEQNLAEWMQMSNLLLD-KPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 ++ Q+ E ++ ++ + + + S ++ L++ + RYP Sbjct: 61 GRTLYQHALELLRQADGTRELLRRDADTPQGRVTVGMPSSTARVLAIPLARAVRDRYPGI 120 Query: 127 TIKLRNWDYDSLD-AITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 ++L LD + R +D+ R I L ++ + Sbjct: 121 MLELIEAPSADLDTLLERTRLDLAIVVDAVDTR----------GIAIHRLLTETLYLITW 170 Query: 186 KDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMA 245 LD + P + + +D ++E G I+ Sbjct: 171 PGFQVPGDPVPLDAIAQMPLVLPSAPNTIRNRVDWAMREAGLSYEISFEASSTGLLFAAV 230 Query: 246 AQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIV 305 L + P + + + L + +L WH + + Sbjct: 231 MA--QLGVTILPWTAAH------VEIEERKLKLSTVAHRLFARDLSLCWHDTALVSNAVQ 282 Query: 306 WLRETIKNLYASMA 319 ++ I L+ ++ Sbjct: 283 KVKAEIVRLFDTLG 296 >UniRef50_Q87IK7 Putative LysR-family transcriptional regulator n=4 Tax=Vibrio parahaemolyticus RepID=Q87IK7_VIBPA Length = 308 Score = 163 bits (414), Expect = 8e-39, Method: Composition-based stats. Identities = 46/309 (14%), Positives = 103/309 (33%), Gaps = 35/309 (11%) Query: 6 TTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPT 65 +DLNL+ ++ + S TKAA ++ VT A+S S+ +L + LF + T Sbjct: 24 KAIDLNLINTFIVVTECLSYTKAADKLGVTQPAISASIKRLERTTNTKLFTKRGRNIELT 83 Query: 66 PLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQ 125 L + + + + ++ +P + + + A ++ Sbjct: 84 STAQKWLPQLQQALSVIDSVITQPAP-------YNVYCS-----NIYPAQQSKLE----N 127 Query: 126 ATIKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 + L + E D+ + S +I E + + V Sbjct: 128 VFFHESTLSENHLFSLLYSNEADLLLG----------DIESREASIIVEDVCREPCVVIC 177 Query: 185 RKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 R HP +++ + + H + + S + L + + I + L Sbjct: 178 RNGHPRINEHISTEMLSDEKHCVLASKWSFDTEFEKHLGLIVKSNNIDSIASNYLGILTH 237 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 AQ D + + + + + + L P + + + +H+R + + Sbjct: 238 VAQSDCIGVIPL-SLAKKWGKTFNIKLFTSPF-------GACFIQYQIAYHQRKVNCKRH 289 Query: 305 VWLRETIKN 313 +R IK+ Sbjct: 290 GAMRALIKS 298 >UniRef50_Q122V6 Transcriptional regulator, LysR family n=3 Tax=Comamonadaceae RepID=Q122V6_POLSJ Length = 307 Score = 163 bits (413), Expect = 1e-38, Method: Composition-based stats. Identities = 48/271 (17%), Positives = 93/271 (34%), Gaps = 13/271 (4%) Query: 7 TLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTP 66 DL L + + S AA+ IN++ A+S+ + KL LF + + TP Sbjct: 5 NFDLQQLQGFVAVAERGSFRAAAEHINLSSPALSRRIDKLETILGARLFNRTTREVELTP 64 Query: 67 LMVSMEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNALSKQIYQRYPQ 125 L + + + + +A + L + Q YP Sbjct: 65 LGRVFLERARTALDDLESAMLGIADIATHRGGRVTVACVPSAALYFLPTVVSNFSQHYPG 124 Query: 126 ATIKLRNWDYDS-LDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 +++ + + L ++ GE D G +++L I +E + +D + + Sbjct: 125 IRVRVVDETMNQVLQSVLSGESDFGIGF----------MNTLVPEIAFESIHNDPFVLAM 174 Query: 185 RKDHPALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 R++HP ++ N + I++ + LD+ L + G + A + L Sbjct: 175 RREHPLARHKSVNWADVEKESLIAVARSSGNRQLLDDSLTKAGLNPSFAFEVSHVATLLG 234 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVAL 274 M L + L LPL Sbjct: 235 MVEAGLGLAAVPRMALASTHATLVGLPLRQP 265 >UniRef50_B8KMT5 Transcriptional regulator, LysR family n=1 Tax=gamma proteobacterium NOR5-3 RepID=B8KMT5_9GAMM Length = 300 Score = 162 bits (412), Expect = 1e-38, Method: Composition-based stats. Identities = 45/270 (16%), Positives = 96/270 (35%), Gaps = 13/270 (4%) Query: 10 LNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMV 69 +N ++ + + S +AA R++++ A+S ++ L LF + ++ TP Sbjct: 5 INQVMAFSAVARTGSFAEAALRLHLSQPALSIAIKNLEEALGGKLFARTTRSVTLTPEGK 64 Query: 70 SMEQNLAEWMQMSNLLLDK-PHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQATI 128 + + L +H + R K ++AA + +L + +++YP + Sbjct: 65 AFYPVARRLLSDWEQSLQDVRNHFSLRRGKLDIAAMPTYTINLLPKILASFHRQYPNINV 124 Query: 129 KLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKD 187 + + ++ + ++G + + ++ LF D K Sbjct: 125 TVHDVIAESVVEMVREHRCELGVTFDPDD----------SPDLTFQPLFIDRFIAIFPKQ 174 Query: 188 HPALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAA 246 HP L + L YPHIS+ +D L + G T A + M Sbjct: 175 HPLLGKGSLRWRDLLDYPHISLQKPAGTRARIDQTLAKKGLRITPAFESHQLVSIGRMVR 234 Query: 247 QPDNLLLATAPRYCQYYNQLHQLPLVALPL 276 + L + + Q + +A P+ Sbjct: 235 EGLGLSVVPSTSRAQMKEMGLECRAIAFPV 264 >UniRef50_A8H9U3 Transcriptional regulator, LysR family n=3 Tax=Shewanella RepID=A8H9U3_SHEPA Length = 324 Score = 162 bits (411), Expect = 2e-38, Method: Composition-based stats. Identities = 58/327 (17%), Positives = 111/327 (33%), Gaps = 27/327 (8%) Query: 1 MKKSITTLDLN--LLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNS 58 M + + DL+ L + L++ + A+ + ++ S +S L ++R+ F D +FV + Sbjct: 1 MNTNESAKDLSVAHLQLIVCLIKHGNACVASDELGMSQSTISYHLRRVRSIFSDEMFVRT 60 Query: 59 PLGLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPR--GLKFELAAESPLMMIMLNALS 116 GL PT + + + + L + + L A+ L Sbjct: 61 GKGLKPTERCLQVGHFAQDLINRVEEELIHGNDFEATHIERELSLIADDTACGWFG-ELF 119 Query: 117 KQIYQRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLF 176 + + P+ + R W ++L + G V G +S + L +P Sbjct: 120 VDLQKALPKVNLCARPWYLNALKDLDSGAVHFGLHIMQSGIKGIYDLEVVPCYR------ 173 Query: 177 SDVPCVWLRKDHPAL-HQTWNLDTFLRYPHI---SICWEQSDTWALDNVLQELGRERTIA 232 +R HP + L+ YP I W + ++ VL+ G + + Sbjct: 174 ----LCVVRDGHPLVSQGEVTLEDLAMYPVILNDLAGWNNNGHSVMETVLKNHGLKANLV 229 Query: 233 MSLPEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTL 292 L + + T L L L+ P DE + + L Sbjct: 230 GRLGYVNSIFSALQGSNAI---TYTSAVSLPKDLSGLTLLKAPPALDEVECN-----YRL 281 Query: 293 LWHKRNSHNPKIVWLRETIKNLYASMA 319 K + + +L E + N + S A Sbjct: 282 YISKTRYGSQETNYLIEFLYNSFKSFA 308 >UniRef50_P27111 HTH-type transcriptional regulator cynR n=108 Tax=cellular organisms RepID=CYNR_ECOLI Length = 299 Score = 162 bits (411), Expect = 2e-38, Method: Composition-based stats. Identities = 45/271 (16%), Positives = 91/271 (33%), Gaps = 17/271 (6%) Query: 11 NLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVS 70 + + + S T+AA ++V+ A+S+ + +L PLF S + T Sbjct: 4 RHINYFLAVAEHGSFTRAASALHVSQPALSQQIRQLEESLGVPLFDRSGRTIRLTDAGEV 63 Query: 71 MEQNLAEWMQMSNLLLDKPHHQTPRGL-KFELAAESPLMMIMLNALSKQIYQRYPQATIK 129 Q + +Q H +A + L Y RYP T++ Sbjct: 64 WRQYASRALQELGAGKRAIHDVADLTRGSLRIAVTPTFTSYFIGPLMADFYARYPSITLQ 123 Query: 130 LRNWDYDSLDA-ITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDH 188 L+ + ++ + R E+D+G + H E + L ++ + + + H Sbjct: 124 LQEMSQEKIEDMLCRDELDVGIAFAPVHSPELEAIP----------LLTESLALVVAQHH 173 Query: 189 PAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQ 247 P H+ L + + E + +D+ ++ G + + L + + Sbjct: 174 PLAVHEQVALSRLHDEKLVLLSAEFATREQIDHYCEKAGLHPQVVIEANSISAVLELIRR 233 Query: 248 PDNLLLATAPRYCQYYNQLHQLPLVALPLPF 278 L P Q L ++L P Sbjct: 234 TS--LSTLLP--AAIATQHDGLKAISLAPPL 260 >UniRef50_B5XZT9 Transcriptional regulator, LysR family n=5 Tax=Klebsiella RepID=B5XZT9_KLEP3 Length = 310 Score = 162 bits (411), Expect = 2e-38, Method: Composition-based stats. Identities = 58/305 (19%), Positives = 116/305 (38%), Gaps = 32/305 (10%) Query: 4 SITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLS 63 + DLNLL+ + + Q S++KAA + +TPSAVS+SL +LR +DPLFV G++ Sbjct: 6 DLKKFDLNLLVIFECIYQHLSISKAAAMLFITPSAVSQSLQRLRQQLNDPLFVRVGKGMT 65 Query: 64 PTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRY 123 PT V++ +L + ++ ++ + R + + + + ++ + Sbjct: 66 PTTACVNLHYHLQQNLEQLEKTINLNNRSELRKR-IVIYGPPLFCSVNSHFMINELCHQA 124 Query: 124 PQATIKLRNW--DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPC 181 I+ N + + + + D+ F+ R+ + L Sbjct: 125 -NLQIEHHNLTTTESAEELLAYRQADLVFTRMPITNRATICQPYQ----TVQTLA----- 174 Query: 182 VWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRER-----TIAMSLP 236 R DHP Q +++ + ++ + V + IA Sbjct: 175 -VCRADHPRRDQLTSIEALAQE---FFTHYITNDPVIQRV--QQSSTPWLNPGNIAFRSD 228 Query: 237 EFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHK 296 F L M + D L+ P Y + A+PL + + E+ + +H+ Sbjct: 229 SFMTILNMINKTD--LIGFIPSYLYDFISP------AMPLHALDIEALFPEITIYINYHQ 280 Query: 297 RNSHN 301 ++ N Sbjct: 281 SSTQN 285 >UniRef50_B8IVL1 Transcriptional regulator, LysR family n=2 Tax=Proteobacteria RepID=B8IVL1_METNO Length = 318 Score = 162 bits (410), Expect = 2e-38, Method: Composition-based stats. Identities = 37/256 (14%), Positives = 87/256 (33%), Gaps = 12/256 (4%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +DL L +++ + +AA+R+ T A++K + +L A LF S GL+ T + Sbjct: 1 MDLRDLAYFEVIADLGHLGRAAERLGRTQPALTKCIQRLEASVGAELFARSSRGLALTQV 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTP-RGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + L + + + + +L + + + P Sbjct: 61 GEVLLARARRMRTAMDEALREVSDFAAGAAGHVRIGTGATMAEYLLPQVCRALIAAAPAV 120 Query: 127 TIKLR-NWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 T++L+ A+ ++D+ +L+S + +D V Sbjct: 121 TVELQIGMSGVLRTALRDNQLDLIIGP---------VLASDHDEFAHVTFGTDDVVVVAA 171 Query: 186 KDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRE-RTIAMSLPEFEQSLFM 244 + HP + +++ +++ + + LD V Q G + + + Sbjct: 172 RGHPLCGRPLSIEDLVKWKWVLPAKSVAMRQWLDTVFQAHGLPGPAVQIETNSITMLPRL 231 Query: 245 AAQPDNLLLATAPRYC 260 + D L + Sbjct: 232 IGETDLLSFTSTRNLL 247 >UniRef50_UPI00019037C9 nod transcriptional regulator protein, LysR family n=1 Tax=Rhizobium etli 8C-3 RepID=UPI00019037C9 Length = 261 Score = 162 bits (410), Expect = 2e-38, Method: Composition-based stats. Identities = 28/231 (12%), Positives = 77/231 (33%), Gaps = 19/231 (8%) Query: 90 HHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQATIKLRNWDYDSLDAITRGEVDIG 149 F ++ + +++ + +++ + P + L + + + RG+VD Sbjct: 9 FTPDQSDRHFRVSLCDFVTVVLFQKILERLAREAPGISFDLLPLTDNPDELLRRGDVDFL 68 Query: 150 FSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPALHQTWNLDTFLRYPHISIC 209 S + + LF + ++ L + + + H + Sbjct: 69 ISPPLFMSSAHPKID----------LFQERLTCVGCSNNKQLEEALTAEEYSSMGHAVVR 118 Query: 210 WEQSDTWALDN-VLQELGRERTIAMSLPEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQ 268 + ++ +++ LQE G +R + + + F D + R + Sbjct: 119 FGRTQQPTIEDCFLQEHGLKRRVEVVVSSFSMIPAALMGTDRIATVPL-RLVGLFEDTIP 177 Query: 269 LPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWLRETIKNLYASMA 319 L + A P+ + W + +P +W+R + + +++A Sbjct: 178 LRMTAPPIALPT-------FTEAVQWPVLHDKDPANIWMRGIMGSGGSAIA 221 >UniRef50_C1YJH3 Transcriptional regulator, COG0583 n=1 Tax=Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 RepID=C1YJH3_NOCDA Length = 302 Score = 161 bits (409), Expect = 2e-38, Method: Composition-based stats. Identities = 50/277 (18%), Positives = 94/277 (33%), Gaps = 13/277 (4%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 + + L L L+ + + SVT AA+ + V+ S VS +L+ L A LFV SP G+ P Sbjct: 1 MGDVSLRQLEYLRAIARLGSVTAAARELFVSQSTVSTALSDLEAALGVTLFVRSPKGMRP 60 Query: 65 TP---LMVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQ 121 T +++ ++ ++ + + + + I+L + + + Sbjct: 61 TASGQRALAVADDVRASLEQLRETASRERE--EVEGDLTIGCYATIAPILLPRVIAEFSR 118 Query: 122 RYPQATIKLRNWDYDS-LDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 RYPQ + + + LD + +D+ + R + + + L SD P Sbjct: 119 RYPQVRLSFVEASHGTLLDDLLNSRIDLAITYHYELASVRPAV-----GVASQWLRSDPP 173 Query: 181 CVWLRKDHPA-LHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFE 239 D P L P I + L + G + FE Sbjct: 174 YALTPVDGPLSAKGELTLADLAVEPLILFDLPPGGDYFL-GLFDRAGLTPNVRFRTTSFE 232 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPL 276 + A+ L T + + L + Sbjct: 233 MVRALVARGLGNALLTQRTVLERSYEDLPYATRELDI 269 >UniRef50_Q0KE24 Transcriptional regulator, LysR-family n=2 Tax=Cupriavidus RepID=Q0KE24_RALEH Length = 305 Score = 161 bits (409), Expect = 3e-38, Method: Composition-based stats. Identities = 45/308 (14%), Positives = 93/308 (30%), Gaps = 23/308 (7%) Query: 10 LNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMV 69 L L + ++AA + +T AVS+ +A+L L + + T Sbjct: 5 LRQLRVFLAVANTGGFSRAADVVGLTQPAVSRGVAELEEALGVRLLDRTTREVVLTEAGH 64 Query: 70 SMEQNLAEWMQMSNLLLDKPHHQTPRGL-KFELAAESPLMMIMLNALSKQIYQRYPQATI 128 ++ L + + L++ R + +A + ++ +YP+ + Sbjct: 65 ALAPALERLLGQLDDTLEETRQLGERYRGRVVIAGAPTISARLMPLYVAACAAQYPEIRL 124 Query: 129 KLR-NWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKD 187 +R N D L+ + G VD G + + E + +D C R+D Sbjct: 125 TVRDNVQADGLEQVRAGAVDFGVLIDPL----------VRDGLVVEPVATDPFCFVCRRD 174 Query: 188 HPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAA 246 HP + + + +D V G + L M Sbjct: 175 HPLAQSPSVPWAALHGMQLVLLDFASGSRPLIDRVFGRHGVVPLVVQELGHSASVFGMVE 234 Query: 247 QPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVW 306 + + P + L L E ++ + S +P Sbjct: 235 A--GIGASVLPSFSLPLPAASPLVWRPL--------VPCEERSIVMVRREDRSLSPAAAA 284 Query: 307 LRETIKNL 314 + + ++ L Sbjct: 285 VWDLVRRL 292 >UniRef50_A4FE82 LysR-family transcriptional regulator n=5 Tax=Actinomycetales RepID=A4FE82_SACEN Length = 294 Score = 160 bits (407), Expect = 5e-38, Method: Composition-based stats. Identities = 51/273 (18%), Positives = 97/273 (35%), Gaps = 14/273 (5%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L + +E T+AAKR++V S +S S+ L LF + ++ T Sbjct: 1 MELRQLEYFVAVAEECHFTRAAKRLHVAQSGLSASIRSLERELGARLFHRTTRNVTLTAA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTP-RGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 ++ + + D + + L ++ L + +P Sbjct: 61 GHALLHEARRALCAVDSARDAVAAVRGLLRGELSIGTLQCLHVVDLPPVLAGFVTAHPGI 120 Query: 127 TIKLRN-WDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 ++LR D + + G +D+ F+ R + P + L ++ + Sbjct: 121 EVRLRQGGSGDLAEQVRAGRLDLAFAVRP---------ARCPDGVLVHSLDTEPLVLACA 171 Query: 186 KDHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 DHP + P + + +D VL E G ER +A+ + + L + Sbjct: 172 GDHPMAERDRVDPRELGEQPFVDFHPDWGTRDVVDRVLAETGVERRVALEVTDVHSLLEL 231 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLP 277 A L +A PR N + +A P P Sbjct: 232 VAC--GLGIALVPRSFSAKNGQVRFVPLASPAP 262 >UniRef50_A9WGB3 LysR substrate-binding n=2 Tax=Chloroflexus RepID=A9WGB3_CHLAA Length = 304 Score = 160 bits (406), Expect = 6e-38, Method: Composition-based stats. Identities = 40/278 (14%), Positives = 84/278 (30%), Gaps = 19/278 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L + +E +T+AA+++ ++ A+S+ + L LF + T Sbjct: 1 MELRQLRYFLAVAEEGHITRAAEKLYISQPALSQQIKLLEEEIGTVLFDRIGRRIRLTAA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRGL-KFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + +Q + + + ++ L YP Sbjct: 61 GEILVAHARRALQELSEAQVAIDELNGLQRGMLRIGVVQTVNAYLMPDLVAAFTNAYPAI 120 Query: 127 TIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 ++++ D + G++ IG + E LFS+ V + Sbjct: 121 SLQIEELATRDIEQRLADGDLQIGIGFVPPET----------AGVTGEELFSEDLVVVVS 170 Query: 186 KDHPALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 + HP + + + P I + D G + + + + L Sbjct: 171 RQHPWADLPQLPVQSLHQQPLILLSTTFCTRRLWDRCTHIAGIQPRVQIEMNTIGSILAA 230 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQ 282 Q L P Q LV +PL + Sbjct: 231 VRQ--LTLATVLPAMV----LSGQPDLVGIPLVDPTPR 262 >UniRef50_C5BQI4 Transcriptional regulator, LysR family n=1 Tax=Teredinibacter turnerae T7901 RepID=C5BQI4_TERTT Length = 305 Score = 160 bits (405), Expect = 7e-38, Method: Composition-based stats. Identities = 45/290 (15%), Positives = 94/290 (32%), Gaps = 22/290 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +D+ L L + E+ V +AA+R++VT A+S+ L KL PLF G+ T Sbjct: 1 MDIKQLRYLVGIADEQHVGRAAERLHVTQPALSQQLRKLEEEIGSPLFERHHRGMRLTIA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQ-TPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 M ++ + + ++ + + ++ ++ + P Sbjct: 61 GQVMLKHARQILAQMEDARNEIDSLADTGECLVHIGTIQSMNFHLIPTAISRLQESEPNI 120 Query: 127 TIKLRNWDYDSLDA-ITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 +++ L+ + + ++D G L ++ + E LFS+ + + Sbjct: 121 HVRVAELSGSQLEDSVAKEKLDFGIGF----------LPTIREDLVTEQLFSENFYLAVH 170 Query: 186 KDHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 + HP Q + + D I + L + Sbjct: 171 RSHPLAEQEVVDFKQLHGLSMALLTDRYISRRLFDTAALRASIRPKIKVETNTTASLLLI 230 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLW 294 A L PR ++ ++ L P L+ L+W Sbjct: 231 ACVS--QLAVVLPRAAIPEWIQSKVAMITLKNP-------TLQRSVGLIW 271 >UniRef50_Q1V682 Putative transcriptional regulator protein n=1 Tax=Vibrio alginolyticus 12G01 RepID=Q1V682_VIBAL Length = 304 Score = 160 bits (405), Expect = 8e-38, Method: Composition-based stats. Identities = 47/270 (17%), Positives = 98/270 (36%), Gaps = 16/270 (5%) Query: 7 TLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTP 66 + L L +E++ T AA+++++T SA+S+ + KL L+ + T Sbjct: 2 DISYRQLKAFIALAEEQNFTYAAEKVHITQSALSQMMKKLTQQLTSELYQRQGRKIILTE 61 Query: 67 LMVSMEQNLAEWMQMSNLLLDKPHHQTP-RGLKFELAAESPLMMIMLNALSKQIYQRYPQ 125 + Q + + L+ + + +++ L + + +RYP Sbjct: 62 AGEQLYQEARFIVNRLDKLVQQNKDRQHGYNKSLVVSSLYTLCASLAPKTLNDLKKRYPD 121 Query: 126 ATIKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 T +L D + ++ +G+ DIG + +H +++++LF D C Sbjct: 122 FTFRLIEERVDDITHSVLQGQADIGINTNPNH-----------PELNFDLLFRDYLCFVC 170 Query: 185 RKDHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 R+DHP H+ + + +Y I + S D Q +G +S L Sbjct: 171 RQDHPLAEHKQVSWEQAHQYASIGVSPGNSLRTLADEAFQRIGLTYDPELSASHTSTLLG 230 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVA 273 M L + ++ + Sbjct: 231 MI--SSGLGSTILSSTIGELSNNVEVRFIP 258 >UniRef50_B7VQK1 Transcriptional regulator n=3 Tax=Gammaproteobacteria RepID=B7VQK1_VIBSL Length = 310 Score = 160 bits (405), Expect = 8e-38, Method: Composition-based stats. Identities = 61/305 (20%), Positives = 118/305 (38%), Gaps = 21/305 (6%) Query: 18 LLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSMEQNLAE 77 +++ R+ AA ++ ++ ++VS+ +AKLR F D LF+ G+ P+ L + + E Sbjct: 17 AVVETRNTHAAADKLGISQTSVSRGMAKLRETFGDQLFLRKAHGVEPSELAEKLAEAADE 76 Query: 78 WMQMSNLLLDKPHHQTPR--GLKFELAAESPLMMIMLNALSKQIYQRYPQATIKLRNWDY 135 +++ H+ P+ + +A L+ + + + K + + PQA+ KL W Sbjct: 77 MYSPLIKVVESYHNFDPKIFTGEVTIALNIFLLELYGDGVFKVLQEALPQASFKLIYWQD 136 Query: 136 DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPALHQTW 195 SL + G+VD + LP I L + RKDHP L ++ Sbjct: 137 KSLVEVLNGQVDYLL---------QLSGIPLPQDIYQHKLTEVKLSLIARKDHPVLSKSS 187 Query: 196 NLDTFLRYPH--ISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQPDNLLL 253 + P I I + ++++ G I ++ D Sbjct: 188 EWEDIHHLPITRILIDGINTKRAPIEDLYISKGYSANIVLATHSLTVLRSKLRNSDAF-- 245 Query: 254 ATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWLRETIKN 313 + + L PLP + +++ V L KR P L +T+++ Sbjct: 246 ----SFGSSFMTEDDSELRCYPLPNLPKEMRQIGVEGGYLQSKR--GFPLHQLLHQTMQS 299 Query: 314 LYASM 318 + S+ Sbjct: 300 YFDSI 304 >UniRef50_C6C982 Transcriptional regulator, LysR family n=1 Tax=Dickeya dadantii Ech703 RepID=C6C982_DICDC Length = 298 Score = 160 bits (405), Expect = 8e-38, Method: Composition-based stats. Identities = 41/275 (14%), Positives = 89/275 (32%), Gaps = 15/275 (5%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 +I+ + L L + + ++A +++T SA+S S+ L LF + + Sbjct: 1 MNISNISLRQLRIFLAVAEHHGFSRAGNMMSLTQSAMSHSIGDLENELGIRLFERTTREV 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLL-DKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQ 121 T + + L + L + R +A + ++ QI + Sbjct: 61 LLTQEGAELSEALRRVLGELETTLCNTQSRAERRRGLVHVATSPTISAGIMPDCIAQIAE 120 Query: 122 RYPQATIKLRN-WDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 YPQ + + + ++ + GEVD G S+P + E + Sbjct: 121 NYPQVNLIIHDRVQQQAMQMVLNGEVDFGVIIEP----------SVPSDLYTETFMEEPF 170 Query: 181 CVWLRKDHPALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFE 239 C+ L ++H + + + + +DN L G + L Sbjct: 171 CLVLPENHQIARLKQVTWHDLQNQEMVLLDYASGSRPLIDNALIRHGVTPHVIQELGHVT 230 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVAL 274 + + ++ P+ + L + L Sbjct: 231 TIFRILQS--GIGVSVIPQLALSSLECSGLAVRQL 263 >UniRef50_B9KVK0 Transcriptional regulator, LysR family n=1 Tax=Rhodobacter sphaeroides KD131 RepID=B9KVK0_RHOSK Length = 321 Score = 159 bits (403), Expect = 1e-37, Method: Composition-based stats. Identities = 45/273 (16%), Positives = 86/273 (31%), Gaps = 17/273 (6%) Query: 7 TLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTP 66 +DL L + +S AA I+++ A+++ + KL A L + +S T Sbjct: 15 NIDLEDLRAFVATAEMQSFRAAADSIHLSQPALTRRIQKLEATLGVSLLERTTRRVSLTA 74 Query: 67 LMVSMEQNLAEWMQMSN-LLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQ 125 + + LL R +A L + + +P Sbjct: 75 VGRDFLPRARRILDDLETSLLSVREIAERRSGLVSIACIPTAAYYFLPDVISAFTEEFPA 134 Query: 126 ATIKLRNWD-YDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 ++ + + L +I E D G + LL + + ++ L + + Sbjct: 135 IRFRIFDAGANEVLQSILNREADFGIT----------LLGADDPDVTFDPLIEEPFLLAC 184 Query: 185 RKDHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 R+DHP Q + +++ + +D L + SL Sbjct: 185 RRDHPLARQESVTWADLAAHRFVTVGRTSGNRLIMDLALARANVRPRSFFEVQHLSTSLG 244 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPL 276 + L +A PR +V LPL Sbjct: 245 LVEA--GLGVAALPRMA--LPAGPHPSIVTLPL 273 >UniRef50_B2JVU4 Transcriptional regulator, LysR family n=43 Tax=Proteobacteria RepID=B2JVU4_BURP8 Length = 322 Score = 159 bits (402), Expect = 2e-37, Method: Composition-based stats. Identities = 48/271 (17%), Positives = 97/271 (35%), Gaps = 15/271 (5%) Query: 7 TLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTP 66 DLN L + +++ S KAA+ +N++ A+S+ + KL LF + ++ T Sbjct: 4 NFDLNDLQAFRAVVELGSFRKAAEAVNISQPALSRRIDKLEEALGVRLFERTTRSVTLTT 63 Query: 67 LMVSMEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNALSKQIYQRYPQ 125 + + + + ++ L + +A + L ++R+P+ Sbjct: 64 VGRVFAPSAEQLLDDLDVALLGIRDVSSSRLGHVTIACVPSVAYYFLPGAVASYHRRFPR 123 Query: 126 ATIKLRNWD-YDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 +K+ + D L A+ GE D G S + S +++++L + Sbjct: 124 IRVKILDSSANDVLAAVISGEADFGVSF----------MGSQEPDVEFKMLLQERFVAAC 173 Query: 185 RKDHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 R+DHP + + + ++S+ + LD L + L Sbjct: 174 RRDHPLARKKRVTWNELYEHEYVSVDKTSGNRLLLDQALGAVSPRMPSVCETRHVTTMLG 233 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVAL 274 + L +A P H L V L Sbjct: 234 LVEA--GLGVAAVPSMAMPGRNHHILTSVPL 262 >UniRef50_A8GGW8 Transcriptional regulator, LysR family n=39 Tax=Enterobacteriaceae RepID=A8GGW8_SERP5 Length = 300 Score = 158 bits (401), Expect = 2e-37, Method: Composition-based stats. Identities = 61/275 (22%), Positives = 104/275 (37%), Gaps = 13/275 (4%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 +I +D+NLL L LL S K A ++ ++ SAVS +LA+LR ++PLF Sbjct: 1 MNILQMDMNLLKVLYLLTSTGSSQKTADKLGISTSAVSHALARLREVLNEPLFRREGHRQ 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQR 122 PT +S+++ L + L P F L A L I+L L Q Sbjct: 61 VPTLFALSLKEKLTPLFSALDGELFGHLQDAP--RHFNLVAPPALHPILLP-LLAQKSTL 117 Query: 123 YPQATIKLRNWDYDS-LDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPC 181 I+ +N++ S + + G +D+ + + R+ L +L + +F Sbjct: 118 A-NVDIRCQNFERRSWRNDLLEGSIDMVIAVGDHQQRTSALRYALIGSTRLVAVFGGPLQ 176 Query: 182 VWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQS 241 R H Y H LD L+ G +R I +S ++ Q Sbjct: 177 --QRLQH---KSGLAFSELANYAHYYCHPWPQAENELDRQLERQGLQRRIQLSCADYAQL 231 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPL 276 + + + P + ++ L LP+ Sbjct: 232 PPVLRAAPLMAVVPQPWFSAQPDKR---GLFTLPI 263 >UniRef50_A8H1K8 Transcriptional regulator, LysR family n=2 Tax=Shewanella RepID=A8H1K8_SHEPA Length = 298 Score = 158 bits (401), Expect = 2e-37, Method: Composition-based stats. Identities = 67/318 (21%), Positives = 119/318 (37%), Gaps = 33/318 (10%) Query: 2 KKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLG 61 ++I+ DLN + L L+ +++++ A+R+ T SA+SK+L +LR DPLF+ P G Sbjct: 6 NRNIS--DLNQIRLLLDLVHTKNMSRTAQRLGKTTSAISKNLQRLREELCDPLFIRQPSG 63 Query: 62 LSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPR--GLKFELAAESPLMMIMLNALSKQI 119 L PT +++ L + + D P+ K LAA + LM L + Sbjct: 64 LEPTTYALTLTAKLTNIQKDIDAAFDS-ESFDPKLFKGKITLAANTALMHQYQGELLLAL 122 Query: 120 YQRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 ++ P A I++ W DS I G ++ G + +I VL Sbjct: 123 TEQAPLANIEIVQWQEDSYQRILDGSINAGLQFLNENCTQ---------SIMQHVLQRHE 173 Query: 180 PCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWAL--DNVLQELGRERTIAMSLPE 237 + H A L P + + ++ L + G E + + + Sbjct: 174 IVLVTGGKHSASSAR----EALSSPLAVLKIHGWNADSVRFSRYLYQKGVEHNVRLQCED 229 Query: 238 FEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKR 297 L + + ++ PR+ L + L P E+ + Sbjct: 230 LPSLLSCLERSN--FVSPLPRFL----CPGNLKALTLDEP-------GNEISSVVCIPST 276 Query: 298 NSHNPKIVWLRETIKNLY 315 + + P WL IK+L Sbjct: 277 HRNEPLYQWLVGLIKSLM 294 >UniRef50_Q2T940 Transcriptional regulator, LysR family n=6 Tax=Burkholderia RepID=Q2T940_BURTA Length = 395 Score = 157 bits (398), Expect = 4e-37, Method: Composition-based stats. Identities = 43/287 (14%), Positives = 103/287 (35%), Gaps = 24/287 (8%) Query: 2 KKSITTLDLN-LLL---CLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVN 57 ++++ ++ N LL L + + R+ T+AA+ ++++ SA+S+ + +L LF Sbjct: 78 RRNMKSMQRNPLLRNICYLLAVDEHRNFTRAAEALSISQSALSQKIRQLEDELGAQLFDR 137 Query: 58 SPLGLSPTPLM---VSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNA 114 S + T + + + + L+ H + + ++ Sbjct: 138 SGRVVQLTDFGGVYLEYARRAHSDLLTAQRALNDVH--DLSRGQLRIGFTPTFTEYLIAP 195 Query: 115 LSKQIYQRYPQATIKLRNWDYDSLD-AITRGEVDIGFSGRESHPRSRELLSSLPLAIDYE 173 + + ++RYP I++ D+++ A+ +VD+ F + I+ E Sbjct: 196 VIEHFHERYPGIVIEMTEMSLDAVETALGDDQVDLAFGFVDVR----------SDEIEAE 245 Query: 174 VLFSDVPCVWLRKDHPAL--HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTI 231 LF + + HP D P + + +D+ Q + + Sbjct: 246 ALFPERLMLVAGATHPLTTQRDPITPDQLAETPLALLTTSFVSRFYIDSYFQSYDMKPNV 305 Query: 232 AMSLPEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPF 278 A+ L + + + P ++ ++ Q + P P Sbjct: 306 ALQANSISAVLKIVRR--GKIATILPGTIEFEHRDLQYVPLDPPFPV 350 >UniRef50_B9KYF2 RuBisCO operon transcriptional regulator n=1 Tax=Thermomicrobium roseum DSM 5159 RepID=B9KYF2_THERP Length = 299 Score = 157 bits (397), Expect = 6e-37, Method: Composition-based stats. Identities = 45/257 (17%), Positives = 87/257 (33%), Gaps = 15/257 (5%) Query: 7 TLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTP 66 + L L + + + RS ++AA+ + ++ AVS + L PLF + G+ T Sbjct: 2 DVSLRQLQVFRSVARHRSFSRAAEDLVISQPAVSAQIKSLEQVLGVPLFQRTGRGVELTE 61 Query: 67 LMVSMEQNLAEWMQMSNLLLDKPHHQTPRGL-KFELAAESPLMMIMLNALSKQIYQRYPQ 125 + + + + L H + +AA + + ++ ++ YP Sbjct: 62 AGRQLLPYAERLLNLLDEALAAVHELRCAQRGQVRVAASTTAGIYVVPKALGAFHRAYPG 121 Query: 126 ATIKLRNWDYDSLDA-ITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 + L + ++ + G+ D+ G P+ E+ LP V Sbjct: 122 VELSLDVLNRFAVHQRLLAGDADVAIMGLIEDPQDLEIEQFLPN----------ELVVIA 171 Query: 185 RKDHPALHQ-TWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 H + LD R P + ++ + E G +AM L Sbjct: 172 SPRHHLARRHQIPLDEIAREPFLVREIGSGTRADMERIFAEAGLSPRVAMELRSNGAIKQ 231 Query: 244 MAAQPDNLLLATAPRYC 260 A +L +A PR Sbjct: 232 AVAA--DLGVAVMPRDA 246 >UniRef50_C8WSN1 Transcriptional regulator, LysR family n=1 Tax=Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 RepID=C8WSN1_ALIAD Length = 290 Score = 156 bits (396), Expect = 9e-37, Method: Composition-based stats. Identities = 50/312 (16%), Positives = 96/312 (30%), Gaps = 26/312 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L + + +S +AA I V+ A+S+++ KL PLFV + G+ TP Sbjct: 1 MELVQLEYFLAVAEYQSFRRAADAIRVSQPALSRAIQKLEGDLGAPLFVRTAQGVRLTPC 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQT-PRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + + + K + L L + + + +P Sbjct: 61 GEAFLPHARQALAEVAAGARKVAELAGQARGVLHVGLIYSLGTRFLPDVIRTFTRTHPGV 120 Query: 127 TIKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 T++L L + GE+DI F + P + + + + Sbjct: 121 TVRLSEAPTQKLLQQLDAGEIDIAFCTPQHAPHLTLV-----------EILQEELVAIVP 169 Query: 186 KDHPA-LHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 DHP +L P ++ E ++ E G +AM Sbjct: 170 LDHPLAAKDQCHLSDLAGEPFVAYARESGIRHVIERYCAEAGFTPRVAME---------- 219 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 D + L LP+ + + + WH + +P Sbjct: 220 -GVEDLTVAGLVAAGVGVAVVPLHAQLDQLPVHV-LRLCEPCKRSVYMAWHTHTTLSPVA 277 Query: 305 VWLRETIKNLYA 316 +K + A Sbjct: 278 RAFIAFVKRMCA 289 >UniRef50_A6ULR6 Transcriptional regulator, LysR family n=1 Tax=Sinorhizobium medicae WSM419 RepID=A6ULR6_SINMW Length = 307 Score = 156 bits (395), Expect = 1e-36, Method: Composition-based stats. Identities = 45/271 (16%), Positives = 86/271 (31%), Gaps = 13/271 (4%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L +++ + +AA+++ T A+SKS+ ++ + L V S G++ T Sbjct: 1 MELRDLQYFEVIATTGHIGRAAEKLGRTQPALSKSVRRIESEIGTKLLVKSGRGVALTTA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQT-PRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 M + L + + + + +L + +I + P Sbjct: 61 GRVMLERARSLRMSVEQNLREMADIAKGAVGNVRVGSGATTAEYLLPLVCSRILREAPGI 120 Query: 127 TIKLRNWDYDSLD-AITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 ++ D L A+ G+VDI S L D V Sbjct: 121 KFEISIGMNDVLRTALNDGKVDIVVGPVTKGDES---------NYTVHRLGEDSVVVAAA 171 Query: 186 KDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGR-ERTIAMSLPEFEQSLFM 244 + HP + + Y + +D E +A+ S + Sbjct: 172 RGHPLTRKKATIADLQDYGWVLPARSVVTRQWIDAAFASRDLSEPDVAIQTNNISLSPRL 231 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALP 275 A D LL + R L ++LP Sbjct: 232 IAPTD-LLTFISRRNLGRGRVGEPLVEISLP 261 >UniRef50_UPI0001C3192A transcriptional regulator, LysR family n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C3192A Length = 343 Score = 155 bits (394), Expect = 1e-36, Method: Composition-based stats. Identities = 49/270 (18%), Positives = 91/270 (33%), Gaps = 11/270 (4%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L + +E S T+AA R++V VS + +L A + L S + PT Sbjct: 1 MELRQLEYFVAVAEEASFTRAAARLHVAQPGVSAQVRRLEAELGEQLLDRSGRSVRPTEA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRGL-KFELAAESPLMMIMLNALSKQIYQRYPQA 126 V++ + + + T + + S +L L + +P Sbjct: 61 GVAVLPHARAALASVGAVRGAIEELTGLVRGRVAIGMVSSYPSAVLPDLLASFSRLHPDV 120 Query: 127 TIKL-RNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 I L + + A+ GE+D+ G + P + + L + + Sbjct: 121 EITLGEDNSDRLVQALQHGELDLALIGS--------ARTGPPPGLATQTLTDEPLVAAVS 172 Query: 186 KDHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 HP T + P + + ALD+ G E IA + + Sbjct: 173 HTHPLATRSTLTVAALAGSPLMCLPRGTGIRTALDDACATAGVEPRIAFEASDPVPLALL 232 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVAL 274 AA+ + + A +LH + L Sbjct: 233 AARGLGVAILPASLAAARSGELHAIALTRP 262 >UniRef50_Q1QYT3 Transcriptional regulator, LysR family n=1 Tax=Chromohalobacter salexigens DSM 3043 RepID=Q1QYT3_CHRSD Length = 317 Score = 155 bits (394), Expect = 2e-36, Method: Composition-based stats. Identities = 48/316 (15%), Positives = 112/316 (35%), Gaps = 22/316 (6%) Query: 7 TLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTP 66 L L L L R++ +AA+R+ ++ A SK L +L LF P G++P Sbjct: 13 RLKLRHLQLFIALDDLRNLHRAAERLGMSQPAASKLLGELEGQLGLALFERHPRGITPNW 72 Query: 67 LMVSMEQNLAEWMQMSNLLLDKPHHQTP-RGLKFELAAESPLMMIMLNALSKQIYQRYPQ 125 ++ ++ + + D+ + + + +L + +++++ P Sbjct: 73 YGETVIRHARGILSSLHQAGDELNALQAGSAGSVSVGTVMAPAVTLLTSAVERVHRDRPN 132 Query: 126 ATIKL-RNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 + + + ++ + + GE D + S + +E + + C Sbjct: 133 LKVSIDVDVSHELIPRLVEGEFDFAIARIPSTLPAG--------DFVFEEIGEEALCFVC 184 Query: 185 RKDHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELG--RERTIAMSLPEFEQS 241 R HP +T NL+ + YP + +D++ G R I + P+ + Sbjct: 185 RAGHPLADRTSLNLEAMVEYPWVLQPPGALMRQRVDHLFLHHGVALPRQI-IDTPDILVA 243 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 L M + D + + T + + + ++ P + + + + Sbjct: 244 LAMVDKSDTVTVTT-RQVAELLCDQPRFRILPFPEALSVQPYGLVSL-------REQRLS 295 Query: 302 PKIVWLRETIKNLYAS 317 P L +++L Sbjct: 296 PGAAALMSALRDLIRE 311 >UniRef50_B5XVV4 Transcriptional regulator cynR n=5 Tax=Enterobacteriaceae RepID=B5XVV4_KLEP3 Length = 313 Score = 155 bits (394), Expect = 2e-36, Method: Composition-based stats. Identities = 47/267 (17%), Positives = 92/267 (34%), Gaps = 14/267 (5%) Query: 10 LNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMV 69 L L + + R T+AA ++V+ A+S+ + +L A + LF S T Sbjct: 3 LRHLSYFIAVAEHRGFTRAAAALHVSQPALSQQIRQLEAMLEVQLFDRSGRYTRLTDAGE 62 Query: 70 SMEQNLAEWMQMSNLLLDKPHHQTPRGL-KFELAAESPLMMIMLNALSKQIYQRYPQATI 128 + ++ H K +A +L L + Y+RYP + Sbjct: 63 IWLEYARRVLRDLEEGRRALHDAEDLQRGKLRIAMTPTFTTYVLGPLVEAYYRRYPGVKL 122 Query: 129 KLRNWDYDSLD-AITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKD 187 ++ + + ++ + E+D+G + ES R I + L ++ + + + Sbjct: 123 LIQEMNQERMETMLLEDELDVGIAFDESLSR----------DIVVQPLLTETLALVVSRA 172 Query: 188 HPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAA 246 HP H++ L P I + E + +D + E + M L + Sbjct: 173 HPLAHESHLQLQALDAQPLILLSSEFATREQIDRYCRRHRLEPDVRMEANSIGAVLTVIR 232 Query: 247 QPDNLLLATAPRYCQYYNQLHQLPLVA 273 L Y+ L + L Sbjct: 233 GT-LLATLLPAAIAGQYDDLVAIELKP 258 >UniRef50_A6WDF3 Transcriptional regulator, LysR family n=1 Tax=Kineococcus radiotolerans SRS30216 RepID=A6WDF3_KINRD Length = 306 Score = 155 bits (394), Expect = 2e-36, Method: Composition-based stats. Identities = 55/276 (19%), Positives = 99/276 (35%), Gaps = 15/276 (5%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +DL + + L ER T+AA V+ S +S ++ L LF SP + PT Sbjct: 1 MDLRQMQYVVALADERQFTRAAALSGVSQSGLSAAIRTLEDELGATLFDRSPRRVEPTDA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 +++ + + D T R + AE L ++ ++ L ++ ++R+PQ Sbjct: 61 GLALLPFARTLLAQATAARDAVVQATRRLSGTLRVGAEQCLGVVDVSTLLERFHRRFPQV 120 Query: 127 TIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 I +D L + GE+D+ F H + L + + Sbjct: 121 EIHFEQAGSHDLLGRLREGELDLVFVATTEHLGALPAS----------ELGREPLVLLTP 170 Query: 186 KDHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 +HP + +P I D G R + S+ + L + Sbjct: 171 PEHPLAGRPHAPWAELAAHPFIDFVPSWGVRPITDAACAAHGVHRRVRFSVGDVHALLDL 230 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDE 280 + L +A PR+ Q +L +V +P E Sbjct: 231 VGR--GLGIAIVPRHVAAKPQAARLAVVPMPPGTPE 264 >UniRef50_C6CY97 Transcriptional regulator, LysR family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CY97_PAESJ Length = 305 Score = 155 bits (392), Expect = 2e-36, Method: Composition-based stats. Identities = 46/264 (17%), Positives = 89/264 (33%), Gaps = 14/264 (5%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L + ++ VT+AA+ ++V SAVS+ + +L LF+ L TP+ Sbjct: 1 MELRQLYYFVKVAKKEHVTQAAEELHVAQSAVSRQIHQLEEELGVKLFLQKGRNLQLTPV 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQ-TPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + + + H P + L L + ++ + + +P Sbjct: 61 GQLFLKRAEVILDDLERAVVEIHEFMDPEKGEIRLGFPHSLGVSVVPQVVAAFRKLHPNV 120 Query: 127 TIKLRN-WDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + R + + +GE+D+ F + EVL ++ L Sbjct: 121 KFRFRQGMYPSLIRDMVKGEIDLAFISP---------FPDEHEQVCGEVLLTEELFAILP 171 Query: 186 KDHPALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 HP Q +L + S + QE G I E E + Sbjct: 172 PSHPLAGEQEIDLIQLKEDTFVMFSEGYSLRPIVWEACQEAGFTPKIGFEGEETETIRGL 231 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQ 268 A + ++ P Y+ + Q Sbjct: 232 VAA--GMGVSLLPEMALYHAGVLQ 253 >UniRef50_Q4K4U2 Transcriptional regulator, LysR family n=17 Tax=Pseudomonadaceae RepID=Q4K4U2_PSEF5 Length = 309 Score = 155 bits (392), Expect = 2e-36, Method: Composition-based stats. Identities = 44/284 (15%), Positives = 90/284 (31%), Gaps = 17/284 (5%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +D L + +E V +AA+R++++ A+S+ + +L D LF S L PT Sbjct: 1 MDFKQLRYFVAVYEEGHVGRAAERLSISQPALSQQIRQLEQNLDVSLFERSSKRLLPTLA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQT-PRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 ++ + + + + + + ++ + +++ + P Sbjct: 61 AHTLYNHALPLLDGLQQAREALRNFKGQALRTLAIGVLQTVHTSLVPQMLERVRKAQPHL 120 Query: 127 TIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 +++ + + G +DIG S + L+ D + + Sbjct: 121 VVQIYELTGLEIERRLLNGSLDIGISYLPPRQ----------PGLHGVPLYEDELTLVIP 170 Query: 186 KDHPALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 + HP + ++ P + + E L LGR + L L Sbjct: 171 EQHPLREFKKVSMSQAAELPMLLLGEEFQIRQIWQAQLANLGRRPQVQAELNNMAGILDS 230 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEV 288 L P Q Q L+ PL K V Sbjct: 231 LPHT--RLATVLPGRSQQ--QHGNKELLWKPLSEPRVPLKVGLV 270 >UniRef50_Q5E087 Transcriptional regulator, LysR family n=1 Tax=Vibrio fischeri ES114 RepID=Q5E087_VIBF1 Length = 310 Score = 155 bits (392), Expect = 2e-36, Method: Composition-based stats. Identities = 49/236 (20%), Positives = 98/236 (41%), Gaps = 13/236 (5%) Query: 21 QERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSMEQNLAEWMQ 80 +E++ KAA+R+ VT SA+SK L KLR FD+ LF++S GL TP ++ L ++ Sbjct: 23 KEKNTRKAAERLFVTQSAISKGLKKLREQFDNELFISSNKGLEATPFCEEVQLKLPRLLE 82 Query: 81 MSNLLLD--KPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQATIKLRNWDYDSL 138 L D + +A L + + ++ P A+++L NW +++ Sbjct: 83 ELTSLYDTHSNNDYASYSGTVSIAINPSLTFPFAELIQNYVQEKLPNASLELVNWSWNTE 142 Query: 139 DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPALHQTWNLD 198 I + + +G + +L I + + + L HP L+Q ++ Sbjct: 143 LHIKKQMIHLGINYYPL---------TLTKHIVQQPIADVKFNLCLSTAHPLLNQEITME 193 Query: 199 TFLRYPHISICWEQ--SDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQPDNLL 252 +YP + ++ +L+E +A+ L + ++++ Sbjct: 194 NIAKYPLVMNLMPDYVKQQNHVERLLKEANLTPKVALKSDIMSVCLSTLEKTESVM 249 >UniRef50_A0QNN2 Transcriptional regulator, LysR family protein n=3 Tax=Corynebacterineae RepID=A0QNN2_MYCS2 Length = 293 Score = 154 bits (391), Expect = 3e-36, Method: Composition-based stats. Identities = 37/249 (14%), Positives = 76/249 (30%), Gaps = 15/249 (6%) Query: 13 LLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSME 72 L +L + VT AA + ++ +S++LA+L PLF L + Sbjct: 6 LSWFVVLAETEHVTDAAAELGISQPTLSRALARLEDEVGVPLFDRVNRRLQLNAYGEILL 65 Query: 73 QNLAEWMQMSNLLLDKPHH-QTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQATIKLR 131 ++ + ++ + P LA + L ++ P L Sbjct: 66 EHARRTITEMRSATERIAAMRDPDTGLVRLAFLHSQAGSFVPDLLRRFRAHAPHVQFSLT 125 Query: 132 N-WDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPA 190 +D L+ + G+VD+ + S P + L+ + C+ + + H Sbjct: 126 QGAAHDLLERLAGGQVDLAIT------------SPRPEGFQWRGLYVERLCLAVPRGHRL 173 Query: 191 L-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQPD 249 L P + + + + E G + E + A Sbjct: 174 ASRSRITLADAGDEPFVGLAPGFGLRQLTEELCAEAGITPHVVFEATEIPTMEGLVAAGF 233 Query: 250 NLLLATAPR 258 + + P Sbjct: 234 GVAVVPVPH 242 >UniRef50_Q826F8 Putative LysR-family transcriptional regulator n=2 Tax=Streptomyces RepID=Q826F8_STRAW Length = 296 Score = 154 bits (391), Expect = 3e-36, Method: Composition-based stats. Identities = 50/272 (18%), Positives = 98/272 (36%), Gaps = 18/272 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L + +E S T+AA+R++V S VS ++ L LF + + T Sbjct: 1 MELRQLEHFIAVAEELSFTRAARRLHVVQSGVSAAIRSLERELGCALFERTSQQVRLTGA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDK-PHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 ++ + + D Q + A + + ++ L AL Q++ R+P Sbjct: 61 GAALLPEARATLHAAQAAQDAVRAAQDTLRGTVNVGAMASVEVVDLPALLGQLHARHPAI 120 Query: 127 TIKLR---NWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVW 183 ++LR A+ G++D+ F H P ID L + + Sbjct: 121 DVRLRLATTGSAGLAHALLSGDLDVAFLSLPEHK---------PAGIDARELATVPLVLV 171 Query: 184 LRKDHPALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 + DHP L P + + +D G R +A+ +P+ + Sbjct: 172 VSADHPLAQRGEVALADLAAEPFVDFPPGYGNREVVDRAFAGAGVVRRVALEVPDIDMGA 231 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVAL 274 + L +A P + + L ++ + Sbjct: 232 ALVRH--GLGIAFLPAFA--VARTPGLHVLDV 259 >UniRef50_Q4ZQQ6 Regulatory protein, LysR:LysR, substrate-binding n=10 Tax=Pseudomonas RepID=Q4ZQQ6_PSEU2 Length = 304 Score = 153 bits (388), Expect = 7e-36, Method: Composition-based stats. Identities = 38/250 (15%), Positives = 78/250 (31%), Gaps = 14/250 (5%) Query: 10 LNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMV 69 L + L + + T+AA+ ++V+ A+S+ + +L + LF + + PT Sbjct: 15 LRHIRYLLAVADHGNFTRAAEALHVSQPALSQQIRQLESSLGVQLFDRTRRSVVPTDAGR 74 Query: 70 SMEQNLAEWMQMSNLLLDKPHHQ-TPRGLKFELAAESPLMMIMLNALSKQIYQRYPQATI 128 + + + + + L ++ L + YP I Sbjct: 75 VYLDHARRCLLELDAGKRALNDVSDLSRGQLRLGVTPTFSEYLIAPLIDRFSALYPGVAI 134 Query: 129 KLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKD 187 L + + +A+ +D+ SH ID + LF + C+ + K Sbjct: 135 ILTELPLEQITEALISDALDLAIGFAGSHAV----------EIDSQPLFDEQLCLVMAKP 184 Query: 188 HPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQ 247 L+ + + LD Q + I + L + AQ Sbjct: 185 ASEKQAALTLEDLQALRFALLAPGFATRQLLDAWCQMQNFKPIIGLEANSIAILLKVVAQ 244 Query: 248 PDNLLLATAP 257 + P Sbjct: 245 --GRMATILP 252 >UniRef50_B6EQY4 HTH-type transcriptional regulator, LysR-family n=3 Tax=Aliivibrio RepID=B6EQY4_ALISL Length = 301 Score = 153 bits (387), Expect = 8e-36, Method: Composition-based stats. Identities = 56/302 (18%), Positives = 110/302 (36%), Gaps = 21/302 (6%) Query: 21 QERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSMEQNLAEWMQ 80 +ER AAKR+N++ +S L KLR FDDPLF+ L PT + L + + Sbjct: 17 EERQTILAAKRMNLSQPTISIMLKKLRDQFDDPLFIRDKNNLIPTVKCAHILSTLPDILT 76 Query: 81 MSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQIYQRYPQATIKLRNWDYDSL 138 ++L + L PL+ + L KQ+ P T++ +W ++ Sbjct: 77 QIDVLYRDNTEWDISQLDGELHLLLSPPLISTLGTQLVKQLTLLAPDLTVQCSHWSINTP 136 Query: 139 DAIT-RGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPALHQTWNL 197 + G + + + + D +R DHP + Sbjct: 137 KKLEINSHQHFGITYLPMETNKT---------LMEQEVGGDTFAFVVRHDHPMTEA--TV 185 Query: 198 DTFLRYPH-ISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQPDNLLLATA 256 + + YP I I + + +++ ++ I + + + + + + + Sbjct: 186 ENLIPYPISICIIPGVTGPSKAEQLIRHFKLKKKINLRTSDVALMTNLMKESEYVGI--M 243 Query: 257 PRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWLRETIKNLYA 316 PR Q + +A+P F ++ F H++N P WL + K + Sbjct: 244 PRSLQN-SIGDDFRFLAIPHEFVPEDYQRKIAFFC---HQKNRKQPLTEWLIKETKRILN 299 Query: 317 SM 318 ++ Sbjct: 300 TL 301 >UniRef50_A3RV15 Transcriptional regulatory protein n=4 Tax=Ralstonia solanacearum RepID=A3RV15_RALSO Length = 296 Score = 152 bits (386), Expect = 1e-35, Method: Composition-based stats. Identities = 54/274 (19%), Positives = 102/274 (37%), Gaps = 19/274 (6%) Query: 10 LNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMV 69 L L+ L+L++++ S AA+ V+ AVS ++ +L+ F PL V S PT L + Sbjct: 3 LRHLIYLRLVIEQGSFAAAAEMAGVSQPAVSHAMKQLQQQFTAPLLVRSGRRYVPTDLAL 62 Query: 70 SMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQATIK 129 + +A Q + L + ++ L +P+ ++ Sbjct: 63 QLASEVASLEQRMD-ALATVSPPRADRDVLRIGLTPSAALVCGPILYDGWCSGHPRRRLE 121 Query: 130 LRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDH 188 L + D L + R D+ + + +P + L+ P V+ R+ H Sbjct: 122 LTSADEGGLLAGLQRRAFDLVVAPKPRG--------FVPRGVACRRLYQLSPLVYARRAH 173 Query: 189 PALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRER----TIAMSLPEFEQSLFM 244 PA+ L+ + S +D + + R + +S P++ L + Sbjct: 174 PAVGAQ-TLEALQGMAWACV--GPSVRGPVDVLTEAYRVRRLKPPRVVVSCPDYASMLNL 230 Query: 245 AAQPDNLLLATAPRYC-QYYNQLHQLPLVA-LPL 276 A D L + P + ++ L L LPL Sbjct: 231 VAGTDLLAVVPHPALIGEAGKRVTPLRLRESLPL 264 >UniRef50_D0Z296 Transcriptional regulator LysR family n=1 Tax=Photobacterium damselae subsp. damselae CIP 102761 RepID=D0Z296_LISDA Length = 304 Score = 152 bits (385), Expect = 1e-35, Method: Composition-based stats. Identities = 46/312 (14%), Positives = 105/312 (33%), Gaps = 27/312 (8%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 + + D NL++ L +L++E+ ++ AAK + ++ SAVS+ L+KLR F+D L V + Sbjct: 7 QPLIKYDQNLMVALYVLLREKHISNAAKHLCISQSAVSQKLSKLRYIFNDNLLVRINNEM 66 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPH-HQTPRGLKFELAAES-PLMMIMLNALSKQIY 120 TP +++ L + + + H + + M ++ + Sbjct: 67 VLTPFALTLYPMLEAHISSAIDIFHMRHKTNDTMKKVYRICIIDGIGMDLVSKKSLDILK 126 Query: 121 QRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 + ++ N ++ + G +D+ L I + Sbjct: 127 DMNFAVSFEIINRYDACVEDLNNGNLDLLIGS----------FDGLSNNIHQVNIGEMEY 176 Query: 181 CVWLRKDHPALH---QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPE 237 ++ K++P L D I + + +V + G+ +S + Sbjct: 177 GLFADKNNPLLQRKSGKVTFDELYSEKFIDFKFHGKLGIEVKSVFNKNGKFLNTILSYSQ 236 Query: 238 FEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKR 297 ++ + L +L + L + + + + WH Sbjct: 237 YDLVAKALIDTEFLAFIPV-----GLVNTEELSKIELDMTLPKGKC-------YMYWHSV 284 Query: 298 NSHNPKIVWLRE 309 + +LR Sbjct: 285 MEKDLFHKYLRN 296 >UniRef50_D0YA85 Transcriptional regulator, LysR family n=5 Tax=Klebsiella RepID=D0YA85_KLEVA Length = 308 Score = 152 bits (384), Expect = 2e-35, Method: Composition-based stats. Identities = 48/314 (15%), Positives = 113/314 (35%), Gaps = 19/314 (6%) Query: 7 TLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTP 66 + + + + +E S+ A++ + V+ A++K++ +L LFV G++ T Sbjct: 10 QIKFHHIRAFVEVAREGSIRGASRALAVSQPALTKAIKELEEGLSAQLFVRRSQGVALTE 69 Query: 67 LMVSMEQNLAEWMQMSNLLLDK-PHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQ 125 S Q+ + ++ D+ Q + + + + + ++ ++ + +Q++PQ Sbjct: 70 NGESFYQHASLILEELRAAQDELLQRQGEQAGQINIGLGASVARSLMPSVICRFHQQHPQ 129 Query: 126 ATIKLRNWD-YDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 +++ ++ + +GE+D + P +E LF V+ Sbjct: 130 VKVRIMEGQLLAMINELRQGELDFTINTYYPGPYDH--------EFSFEKLFEKPFAVFA 181 Query: 185 RKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 R HPA T +L + + S L + L + G + + F + + Sbjct: 182 RAGHPAAQAT-SLGELMDHHWTMPTPRGSYFKQLQDRLNQAGLAPKVDIVCETFSSCISL 240 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 + D L + +L PL+A L + + L+ + P Sbjct: 241 VVKSDFLSILPV--------ELGNDPLMADKLVMIPVRDVLPTATYYLIQRRDTRQTPLT 292 Query: 305 VWLRETIKNLYASM 318 L + + Sbjct: 293 ASLITLFRRQSRQL 306 >UniRef50_Q7WCW0 Probable LysR-family transcriptional regulator n=3 Tax=Bordetella RepID=Q7WCW0_BORBR Length = 305 Score = 151 bits (383), Expect = 2e-35, Method: Composition-based stats. Identities = 50/310 (16%), Positives = 103/310 (33%), Gaps = 24/310 (7%) Query: 10 LNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMV 69 L + RS ++AA+ ++VT A++ + KL A LF + G T Sbjct: 5 FRQLTAFIEVASSRSFSQAAQALHVTQPALTAMIQKLEAQLGVVLFTRTRRGAELTTTGR 64 Query: 70 SMEQNLAEWMQMSNLLLDKPHHQT-PRGLKFELAAESPLMMIMLNALSKQIYQRYPQATI 128 + L + ++++ PRG LA L + +L ++ Q YP+ + Sbjct: 65 ELLPELQRILANLEVVIEDVRGAASPRGGTVTLACIPSLSNTWIPSLIARVEQAYPRIKV 124 Query: 129 KL---RNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 L + + + G++D G +++++L D + Sbjct: 125 ILKDAMTENRSIHEMLRTGDIDYGVGSPSVEQ----------DGLEFDLLAHDELVAVVP 174 Query: 186 KDHPALHQTW-NLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 +DHP +T P I + ++ +D G + + ++ M Sbjct: 175 QDHPLARRTLVRWSELAESPLIGMSYQSHVRMLVDEAFAANGISKRPKREVSLITTAIGM 234 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 L ++ P + L + L + ++ L S +P Sbjct: 235 VRA--GLGVSVLPTTAIEVCNVAGLKV----LRLHAPRVRRPLGFLHL---PTRSLSPAA 285 Query: 305 VWLRETIKNL 314 L +K+ Sbjct: 286 RLLLRFVKDA 295 >UniRef50_P77744 HTH-type transcriptional regulator abgR n=48 Tax=Enterobacteriaceae RepID=ABGR_ECOLI Length = 302 Score = 151 bits (383), Expect = 2e-35, Method: Composition-based stats. Identities = 38/247 (15%), Positives = 95/247 (38%), Gaps = 11/247 (4%) Query: 7 TLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTP 66 + ++ + + ++ S+ A++ +N++ A+SKS+ +L LF G++ T Sbjct: 4 QVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTD 63 Query: 67 LMVSMEQNLAEWMQMSNLLLDK-PHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQ 125 S Q+ + ++ + Q + + + + ++ A+ + +Q++PQ Sbjct: 64 AGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQ 123 Query: 126 ATIKLRNWD-YDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 +++ ++ + +GE+D + P +E L ++ Sbjct: 124 VKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDH--------EFTFEKLLEKQFAIFC 175 Query: 185 RKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 R HPA+ ++ L Y S L +L + + + + F + + Sbjct: 176 RPGHPAIGAR-SIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISL 234 Query: 245 AAQPDNL 251 A+ D L Sbjct: 235 VAKSDFL 241 >UniRef50_Q1YUD1 Probable transcriptional regulator n=1 Tax=gamma proteobacterium HTCC2207 RepID=Q1YUD1_9GAMM Length = 297 Score = 151 bits (383), Expect = 3e-35, Method: Composition-based stats. Identities = 44/270 (16%), Positives = 92/270 (34%), Gaps = 13/270 (4%) Query: 10 LNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMV 69 +N ++ + + S +AA ++ ++ A+S ++ L L + ++ TP Sbjct: 5 INQIVVFTTVARTGSFAEAAIQLYLSQPALSVAMKNLEQSLGGKLLARTTRSVTLTPEGK 64 Query: 70 SMEQNLAEWMQMSNLLLDK-PHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQATI 128 + + + +H K ++AA L + + + +YP I Sbjct: 65 AFYPVARRLLSEWEQSMQDVRNHFALGRGKLDIAAMPTYTTNFLPKILAEFHSQYPNIHI 124 Query: 129 KLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKD 187 + + + + + ++G + + ++ L+ D L Sbjct: 125 TVHDVIAENVVQMVREERSELGITFAPEDA----------PDLHFQPLYQDRFVAILPFK 174 Query: 188 HPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAA 246 HP L QT L YPH+S+ +D LQE G T A + M Sbjct: 175 HPLLEKQTLKWIDLLAYPHLSLQRPAGTRKLIDQALQEKGLLLTPAFESHQLVSIGRMVN 234 Query: 247 QPDNLLLATAPRYCQYYNQLHQLPLVALPL 276 + L + + Q Q ++ P+ Sbjct: 235 EGLGLSVVPSTSRAQMEEMGLQCRAISAPV 264 >UniRef50_A3TPW4 Putative transcriptional regulator n=1 Tax=Janibacter sp. HTCC2649 RepID=A3TPW4_9MICO Length = 292 Score = 151 bits (383), Expect = 3e-35, Method: Composition-based stats. Identities = 40/267 (14%), Positives = 87/267 (32%), Gaps = 16/267 (5%) Query: 10 LNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMV 69 L L L L + R VT A + V+ +S++LA++ A LF P G+ TP Sbjct: 3 LRDLEWLVALAEHRHVTDTAAVLGVSQPTLSRALARIEADLGARLFERVPTGVVLTPHGE 62 Query: 70 SMEQNLAEWMQMSNLLLDK-PHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQATI 128 + + + L P LA + ++ + ++ + P + Sbjct: 63 LVVTAARDLTARHDQLRADLAGRLDPDSGTVRLAFLDSMSTSLVPRVLREFHAHAPAVRV 122 Query: 129 KL-RNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKD 187 L + +D + G V++ + P + L + + + + Sbjct: 123 LLTQEPHHDITRDLDSGAVELAITSWLP-----------PGPFGWVPLQEERLVLVVPPN 171 Query: 188 HP-ALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAA 246 H + +L+ ++ +D++L G ++ + + Sbjct: 172 HRWKARRRISLEALADEDLVTTPHGFGYRTLIDDLLASAGVRPNVSFESADLATIEGLV- 230 Query: 247 QPDNLLLATAPRYCQYYNQLHQLPLVA 273 L +A P + +PL + Sbjct: 231 -SAGLGVAVLPAQFAGHTGTIGIPLAS 256 >UniRef50_B7V886 Probable transcriptional regulator n=7 Tax=Pseudomonas RepID=B7V886_PSEA8 Length = 304 Score = 151 bits (382), Expect = 4e-35, Method: Composition-based stats. Identities = 51/291 (17%), Positives = 101/291 (34%), Gaps = 21/291 (7%) Query: 17 QLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSMEQNLA 76 LM+ +++ A+ + T +SK L +L PLF GL PTP +++ + Sbjct: 16 VSLMETGNLSGTARAAHTTQPGLSKWLKELEEDVGAPLFERHARGLRPTPYGMTLFNHAQ 75 Query: 77 EWMQMSNLLLDKPHHQTP-RGLKFELAAESPLMMIMLNALSKQIYQRYPQATIKLRNWDY 135 + G + L ++ + RYP A ++L Sbjct: 76 RVLTEMERARQNLEAMRSGSGSRVLLGTSPASAPSLVPRALRAFLGRYPGAQVELLEGTM 135 Query: 136 D-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPALH-Q 193 + L+ + + ++D+ +++ ++ EVL+S+ V R HP Sbjct: 136 NGLLERLEKRQLDVVVGRLDNYAPR--------ASLRCEVLYSEAIVVMARPGHPLAQAA 187 Query: 194 TWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTI-AMSLPEFEQSLFMAAQPDNLL 252 + + RY I LD L + GR+ + ++ + D L Sbjct: 188 ALDWEDVRRYDWIVWPPGSPIRSKLDMALTQGGRQPPAYRLESSSMLANIELLRGSDMLS 247 Query: 253 LATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 + +A R ++ L + +AL +P E + W + Sbjct: 248 IGSA-RVVEHLAGLGLVARLALEIP--------GEGAVGMCWRDEPHRDRA 289 >UniRef50_C0Z518 Transcriptional regulator n=3 Tax=Paenibacillaceae RepID=C0Z518_BREBN Length = 295 Score = 151 bits (382), Expect = 4e-35, Method: Composition-based stats. Identities = 54/303 (17%), Positives = 93/303 (30%), Gaps = 21/303 (6%) Query: 13 LLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSME 72 L + + + S T+AA+ + V+ + KL + PLF L T ++ Sbjct: 6 LHTFREVARYGSFTRAAEELGYAQPTVTAQMQKLEQSYGAPLFERYGRKLRLTQAGEALL 65 Query: 73 QNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQATIKLRN 132 E +++ + H + L L + Q+YPQ + LR Sbjct: 66 PYARELIRLYGESKEVIKH--QTTGPIAIGTIDTLAAFFLPPYLQAFCQQYPQVDLVLRT 123 Query: 133 WDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPAL 191 + + I G +D G + V+ + V + H Sbjct: 124 AGEAEIVQQIRDGYLDFGIIFDR---------PCTDPELVTHVIREEELVVVMPPAHRFT 174 Query: 192 HQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQPDN 250 T + P + + L E G + IA E Sbjct: 175 TATALTVHDLGGEPLVLTEEGCTYRGMLLEAFGEAGMTQRIACQFSNPEAIKQCVRC--G 232 Query: 251 LLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWLRET 310 L +A P + L A+P Q K L++HK+ +P +V L +T Sbjct: 233 LGVALLPVMAVQRELAEGV-LTAIPF-----QSDKPPFSIQLVYHKKKWLSPSMVTLVDT 286 Query: 311 IKN 313 I Sbjct: 287 ITR 289 >UniRef50_Q7WJM8 Probable LysR-family transcriptional regulator n=2 Tax=Bordetella RepID=Q7WJM8_BORBR Length = 323 Score = 150 bits (381), Expect = 4e-35, Method: Composition-based stats. Identities = 47/278 (16%), Positives = 97/278 (34%), Gaps = 21/278 (7%) Query: 21 QERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSMEQNLAEWMQ 80 + ++T+ A ++ A+SK L L A LFV P G++PT ++ + + Sbjct: 42 ETGNLTEVANEYGISQPALSKWLKDLEADIGQRLFVREPRGVTPTACARELQAHARAIIG 101 Query: 81 MSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQIYQRYPQATIKLRNWDYD-SL 138 H + + ++L ++ YP + + D L Sbjct: 102 RLERARTAVDHIASGFAGHLSVGFSPVVGPVVLPESIRRFRAAYPDVLVSVIEASIDLLL 161 Query: 139 DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPALH-QTWNL 197 + G+ DI E ++P + E L+ + C+ + HP + + Sbjct: 162 PGLRNGDFDIVVGRLEEV--------AMPEDVRCETLYDEPVCLVAGRAHPLAGRRRISW 213 Query: 198 DTFLRYPHISICWEQSDTWALDNVLQELGRE-RTIAMSLPEFEQSLFMAAQPDNLLLATA 256 + YP IS L+ L G+ A+ + ++ + + D + + Sbjct: 214 EDAQAYPWISPQQGTPLRMRLEMELAVAGQPLPRHAVESTSVQTNVALLDRSDMIAP-MS 272 Query: 257 PRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLW 294 R +++ + L ++ L L P +LW Sbjct: 273 RRLAEHFQRQGVLRILPLTL--------GSGGPIGMLW 302 >UniRef50_Q32IV1 Putative transcriptional regulator LYSR-type n=1 Tax=Shigella dysenteriae Sd197 RepID=Q32IV1_SHIDS Length = 311 Score = 150 bits (379), Expect = 7e-35, Method: Composition-based stats. Identities = 57/329 (17%), Positives = 126/329 (38%), Gaps = 64/329 (19%) Query: 32 INVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSMEQNLAEWMQMSNLLLDKPHH 91 +N+TPSA+S+S+ KLR F DPLF+ G++PT + + + +++ ++ LD Sbjct: 2 LNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTPTAFAMHLHEYISQGLESILGALDIAGS 61 Query: 92 QTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQATIKLRNWDYDSLDAITRGEVDIGFS 151 + +A + ++L + + I YPQ ++ D+ + +++ + D+ Sbjct: 62 YD-KQRTITIATTPSVGALVLPVIYRAIKTHYPQLLLRNPPIS-DAENQLSQFQTDLIID 119 Query: 152 GRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPALHQTWNLDTFLRYPHISICWE 211 R+ + + VLF+D + R+ +P L + +T H+ + E Sbjct: 120 NMFCTNRT----------VQHHVLFTDNMVLICREGNPLLSLEDDRETIDNAAHVLLLPE 169 Query: 212 QSDTWALDNVLQELGRERTIAMSL-PEF-------------------------------- 238 + L +QE+ +R I+ + + Sbjct: 170 GQNFSGLRQRIQEMFPDRQISFTSFTSYTSYNSYNSYNSYNSYNSYNSYNSYNSYNSYNS 229 Query: 239 ------------EQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKL 286 + A D L + R+ +++ L LP P + Sbjct: 230 YNSYNSYNSYNILTIAALVANSDMLAI-IPSRFYNLFSRCWPLE--KLPFP----SLNEE 282 Query: 287 EVPFTLLWHKRNSHNPKIVWLRETIKNLY 315 ++ F++ ++K + P + + + I+N + Sbjct: 283 QIDFSIHYNKFSLRAPILHGVIDVIRNAF 311 >UniRef50_A8FZC1 Transcriptional regulator-like protein n=4 Tax=Shewanella RepID=A8FZC1_SHESH Length = 316 Score = 150 bits (379), Expect = 8e-35, Method: Composition-based stats. Identities = 62/327 (18%), Positives = 120/327 (36%), Gaps = 26/327 (7%) Query: 3 KSITTL-DLNLL--LCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSP 59 SI L +LNLL + ++SV A + ++ VS+ L LR F DPLF+ Sbjct: 1 MSIDKLLNLNLLSIEIFCQVYLKQSVIDVADHLALSQPKVSRELNALRKAFSDPLFIRQN 60 Query: 60 LGLSPTPLMVSMEQNLAEWM---QMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALS 116 L T L ++ L E + + L+ HH R F +A L + + + Sbjct: 61 NRLEATELAHNLYPQLLEMLKVSTQAQKYLNNIHH--QREPSFTIATVPQLEINLPQTIL 118 Query: 117 KQIYQRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLF 176 K + + + L W S++ G++D S + + + + Sbjct: 119 KAAEKNNAKIDVTLCPWTKTSIEEFQNGDLDAAISFEPADRKGILSKPIIQHRGGH---- 174 Query: 177 SDVPCVWLRKDHPALHQTWNLDTFLRYPHISIC--WEQSDTWALDNVLQELGRERTIAMS 234 + R+ HP H +D + YP + + ++ L N + G++ + + Sbjct: 175 -----LIAREGHPIWHNPV-IDEMINYPIVKLITMPFPANKSPLVNYAKRQGKKLEVFAT 228 Query: 235 LPEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLW 294 + + + + +++ + ++ L L D+ K P T LW Sbjct: 229 VSDLGSAANTLLNSNAIIIVGVRAAVNFLQNINGLHAEILDYQQDKDILKNFSYPTTYLW 288 Query: 295 HKRNS----HNPKIVWLRETIKNLYAS 317 K N +P WL++ ++ Sbjct: 289 LKHNQEGQVTSP--QWLQQALEKFITE 313 >UniRef50_C6IV95 LysR family transcriptional regulator n=4 Tax=Bacillales RepID=C6IV95_9BACL Length = 305 Score = 149 bits (378), Expect = 1e-34, Method: Composition-based stats. Identities = 43/256 (16%), Positives = 87/256 (33%), Gaps = 14/256 (5%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L + ++ VT+AA+ ++V SAVS+ + +L LF+ L T + Sbjct: 1 MELRQLQYFVKVARKEHVTQAAEELHVAQSAVSRQIHQLEQELGVNLFMQKGRNLHLTAV 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQ-TPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + ++ + + + H P + L + L + M+ ++ + + YP Sbjct: 61 GQLFCSRVEMILKDLDRAVSEVHEFLDPEQGEIRLGFPNSLGIHMIPSVVAEFRKLYPNV 120 Query: 127 TIKLRNWD-YDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + R + + GEVD+ F + V+ ++ L Sbjct: 121 KFRFRQGTYPTLIRDVVSGEVDLAFISP---------FPENHDQVTGNVVLTEDLVAILP 171 Query: 186 KDHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 HP + L I S + + E G IA E + + Sbjct: 172 PGHPLAGEQSIKLSQLKDEKFILFSKGYSLRPIVWHACLEAGFTPKIAFEGEETDTIRGL 231 Query: 245 AAQPDNLLLATAPRYC 260 A + ++ P Sbjct: 232 VAA--GMGVSLLPEMA 245 >UniRef50_P03030 Transcriptional activator protein lysR n=101 Tax=Proteobacteria RepID=LYSR_ECOLI Length = 311 Score = 149 bits (377), Expect = 1e-34, Method: Composition-based stats. Identities = 48/294 (16%), Positives = 94/294 (31%), Gaps = 17/294 (5%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 + ++L + +M S+T+AA ++ + VS+ LA+ LF L P Sbjct: 1 MAAVNLRHIEIFHAVMTAGSLTEAAHLLHTSQPTVSRELARFEKVIGLKLFERVRGRLHP 60 Query: 65 TPLMVSMEQNLAEW---MQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQ 121 T + + + + + + R + +A L L + Sbjct: 61 TVQGLRLFEEVQRSWYGLDRIVSAAESLREF--RQGELSIACLPVFSQSFLPQLLQPFLA 118 Query: 122 RYPQATIKLRNWDYDSLDA-ITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 RYP ++ + + L+ ++ D+G + P + L S Sbjct: 119 RYPDVSLNIVPQESPLLEEWLSAQRHDLGLTETLHT----------PAGTERTELLSLDE 168 Query: 181 CVWLRKDHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFE 239 L HP + D F +IS+ S LD + E +R + + Sbjct: 169 VCVLPPGHPLAVKKVLTPDDFQGENYISLSRTDSYRQLLDQLFTEHQVKRRMIVETHSAA 228 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLL 293 M + + Y + ++ +PF S + L P + L Sbjct: 229 SVCAMVRAGVGISVVNPLTALDYAASGLVVRRFSIAVPFTVSLIRPLHRPSSAL 282 >UniRef50_A1WRQ7 Transcriptional regulator, LysR family n=2 Tax=Burkholderiales RepID=A1WRQ7_VEREI Length = 299 Score = 149 bits (377), Expect = 1e-34, Method: Composition-based stats. Identities = 53/270 (19%), Positives = 90/270 (33%), Gaps = 15/270 (5%) Query: 7 TLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTP 66 + L L L + RS T AA+ VT SAVSK A+L + PLF S ++P Sbjct: 2 NITLKQLRVFCALYELRSFTAAARAAFVTQSAVSKLCAELESEVGQPLFERSTRSVTPCE 61 Query: 67 LMVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFE-LAAESPLMMIMLNALSKQIYQRYPQ 125 + + +AA +M +L ++ YP Sbjct: 62 GAADFYTYAQQILSTVRAAERSMSSLRSLERGIVGVAASPMVMYGLLGDPLASYHRNYPG 121 Query: 126 ATIKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 + L D ++ + G+VD+G L + +F D Sbjct: 122 IKLDLYELSTDETITYVRHGKVDMGI----------VSLEVKDAELATRPIFRDFMYAVC 171 Query: 185 RKDHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 DHP + + +Y HI + + ++D + ++L + + L Sbjct: 172 TSDHPLAQEEKVSWSELAKYDHIGLHSAYNVRRSIDRICEQLHLDIHFKIEASMVTSVLG 231 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVA 273 M L + P Y + + L LV Sbjct: 232 MVRS--GLGITVVPGYICDFARHLGLVLVE 259 >UniRef50_A6CUQ2 Putative transcription regulator protein n=1 Tax=Vibrio shilonii AK1 RepID=A6CUQ2_9VIBR Length = 298 Score = 149 bits (376), Expect = 2e-34, Method: Composition-based stats. Identities = 61/312 (19%), Positives = 113/312 (36%), Gaps = 30/312 (9%) Query: 9 DLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLM 68 D NLL L L+ Q RS+T A + T SA+SK L+KLR DPLFV S GL PT + Sbjct: 6 DYNLLKVLVLIYQYRSLTTVAAVLGKTESAISKHLSKLREQLGDPLFVRSSNGLEPTHYL 65 Query: 69 VSMEQNLAEWMQMSNLLLDKPHHQTPRGLK--FELAAESPLMMIMLNALSKQIYQRYPQA 126 + + ++ L + + + +A ++ + L + + ++ Sbjct: 66 ERIIPGIETGLRSVEQALKRGEAFDEKNYEKPIVVALDNLSIECFGTELLVALKSVFCRS 125 Query: 127 TIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRK 186 ++LR W D+ +I G+ DIG +SL ++ V Sbjct: 126 RVELRTWRSDTYQSIVDGKTDIGIQFFNEDCSKAVYQASLINV--------EIGAVVASN 177 Query: 187 DHPALHQTWNLDTFLRYPHISICWEQ---SDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 H + + P + ++ + + + + L +L Sbjct: 178 SHID-----SWEQVFENPCVFFEIRGWNETNHRLI-KQMAKYDLSFDYQVKLDNLSVALA 231 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 M + + ++ ++ + V PF + Q V + + N NP Sbjct: 232 MIQRDNYSVV-----LSKHLMPSNGFRFV----PFPDYMQTFTPVVTCMK--QSNRQNPL 280 Query: 304 IVWLRETIKNLY 315 L + IK++ Sbjct: 281 HRKLHDIIKSIV 292 >UniRef50_Q0K3Z3 Transcriptional regulator, LysR-family n=1 Tax=Ralstonia eutropha H16 RepID=Q0K3Z3_RALEH Length = 297 Score = 148 bits (375), Expect = 3e-34, Method: Composition-based stats. Identities = 49/270 (18%), Positives = 99/270 (36%), Gaps = 13/270 (4%) Query: 10 LNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMV 69 + L L L + R+V++ A R+N+T A+S+ LA+L + LF GL PT Sbjct: 3 IRQLHVLVALHETRNVSRTAARLNMTQPALSRWLAELESELGVALFERHSRGLVPTRFCE 62 Query: 70 SMEQNLAEWMQMSNLLLDKPHH-QTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQATI 128 ++ + + + + A + + +L + + +R+P A + Sbjct: 63 ALVVHARTILNEIERTQATIRVMAEGAAGQLAIGATPTVSVDLLPSAISRFRERFPDAHL 122 Query: 129 KLRNWD-YDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKD 187 L D L A+ G +D E + + + ++L+ + V Sbjct: 123 TLAEGTVEDMLPALREGRLDFVMGRTE--------VQGIDGELRCDLLYPETIRVIAGPT 174 Query: 188 HPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELG-RERTIAMSLPEFEQSLFMA 245 HP + Y + LD L G + + ++ + Sbjct: 175 HPLARKRKVGWADTRAYTWVGPPVTSQIRRELDYELALAGEPAPCVRIESATLLANVSLL 234 Query: 246 AQPDNLLLATAPRYCQYYNQLHQLPLVALP 275 Q + LL + R ++++L Q+ ++ LP Sbjct: 235 QQGE-LLAVMSGRMAAFFSRLGQVAILRLP 263 >UniRef50_C0CQ02 Putative uncharacterized protein n=1 Tax=Blautia hydrogenotrophica DSM 10507 RepID=C0CQ02_9FIRM Length = 295 Score = 148 bits (374), Expect = 3e-34, Method: Composition-based stats. Identities = 52/299 (17%), Positives = 98/299 (32%), Gaps = 20/299 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L L + S TK A+ ++ +AV++ + L + PLF + + T Sbjct: 1 MNLRQLKYFVTLAETLSFTKTAQVFYISQTAVTQQIKSLESQLGVPLFRRTKRKVELTSA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPH-HQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 E ++ + + K T + + + + P Sbjct: 61 GAVFLPEAREILEKTQKAIVKTKLAYTGSSDTLRIGVVQGYEHSDMPEALHRFRAQNPNI 120 Query: 127 TIK-LRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 +I R+ D A+ +D+ F+ R + + I L + V+L Sbjct: 121 SISIFRSDASDLYCALQEIRLDVAFNSRIAPGNLEDF------NISSHTLATYPLMVFLH 174 Query: 186 KDHPAL-HQTWNLDTFLRYPHISICWEQSDTWA---LDNVLQELGRERTIAMSLPEFEQS 241 HP + + +L P I + L + + G TI +E Sbjct: 175 PSHPLVRKKECSLSDLNHEPLIFPDLRNDPSGYNKCLLDYFVQTGFVPTIVQESSNYEAI 234 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 L M A L +A P Y + A+PL + + + WH +N + Sbjct: 235 LLMVAAS--LGIAILPSYAHVLAHNLG-NITAIPL-----TGEISSLDIVIAWHNQNHN 285 >UniRef50_A6UB72 Transcriptional regulator, LysR family n=1 Tax=Sinorhizobium medicae WSM419 RepID=A6UB72_SINMW Length = 326 Score = 147 bits (373), Expect = 3e-34, Method: Composition-based stats. Identities = 47/312 (15%), Positives = 113/312 (36%), Gaps = 19/312 (6%) Query: 12 LLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSM 71 LL ++ +E +VT AA+++ ++ A+++S+ +L LF G++PT ++ Sbjct: 23 LLRSFLMVAREGNVTAAAEKLGISQPALTRSIRRLEDETGFRLFDRHTRGVTPTIYGKAL 82 Query: 72 EQNLAEWMQMSNLLLDKPHHQTP-RGLKFELAAESPLMMIMLNALSKQIYQRYPQATIKL 130 ++ + + ++ +L +++ P+ + L Sbjct: 83 LRHAQLIDTECRFASSELEALRSGHRGQIKIGGGPFWGAALLPRAVARLHSLLPKLQVNL 142 Query: 131 RNWDYDSLD-AITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHP 189 + + L + GE+D+ S LS P + + + +++R+ HP Sbjct: 143 QIGVNNVLHPKLLDGELDLVVSAAPRD------LSQFPEHFRFTRITTIRSQMFVREGHP 196 Query: 190 -ALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRE-RTIAMSLPEFEQSLFMAAQ 247 + + YP I + + +L++LG IA+ L + Sbjct: 197 ILAQERIRYEDLANYPWIMYQQDPEIIERVATLLKDLGVNPPRIAIKASSLMAVLELLRS 256 Query: 248 PDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWL 307 D L AP + + + +P+ ++ P + +H+ + L Sbjct: 257 GDFLACLAAP----ILGVVQDVGIRPVPI-----DREIWSFPAGITYHRAIEQSTPFELL 307 Query: 308 RETIKNLYASMA 319 R+ + + + Sbjct: 308 RQMLTDEVTKLG 319 >UniRef50_B4SSL0 Transcriptional regulator, LysR family n=8 Tax=Xanthomonadaceae RepID=B4SSL0_STRM5 Length = 322 Score = 147 bits (373), Expect = 4e-34, Method: Composition-based stats. Identities = 47/266 (17%), Positives = 93/266 (34%), Gaps = 16/266 (6%) Query: 13 LLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSME 72 L ++ SV++AA+ + V+ A+S L L PLF S L P+ + Sbjct: 21 LRAFCQTVRLGSVSRAAEALFVSQPAISLQLQALERELGVPLFERSGRRLVPSREGQLLY 80 Query: 73 QNLAEWMQMSNLLLDKPHH--QTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQATIKL 130 + ++ + L + + + +AA S ++ +L + ++ +P + L Sbjct: 81 EMAQPLVENLDGLEARFRDKVRGLDAGELNIAANSSTILYLLPKIVERFRLHHPDVRLTL 140 Query: 131 RN-WDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHP 189 N D D + D+ ++ +P + Y + + DHP Sbjct: 141 HNAISADGTDLLREDAADLAIGS----------MTDVPADLSYAPAYRFEQVLIAPHDHP 190 Query: 190 AL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQP 248 L RYP + Q +D V Q T+A+ + +E A Sbjct: 191 LASGGELELADIARYPLVLPPKRQITYRLVDQVFQRHRIAYTVALEVGGWEVIKQYVAM- 249 Query: 249 DNLLLATAPRYCQYYNQLHQLPLVAL 274 + ++ P C +L ++ Sbjct: 250 -GMGISIVPALCLNEADRERLAARSM 274 >UniRef50_B1Z4Z1 Transcriptional regulator, LysR family n=5 Tax=Proteobacteria RepID=B1Z4Z1_BURA4 Length = 313 Score = 147 bits (372), Expect = 5e-34, Method: Composition-based stats. Identities = 50/275 (18%), Positives = 97/275 (35%), Gaps = 15/275 (5%) Query: 7 TLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTP 66 DL L + +++ S KAA I+++ A+S+ + KL LF + ++ T Sbjct: 4 NFDLTDLQAFRAVVELGSFRKAADAISISQPALSRRIDKLEEALGVRLFERTTRSVTLTT 63 Query: 67 LMVSMEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNALSKQIYQRYPQ 125 + + + + ++ L + +A + L + ++R+P+ Sbjct: 64 VGRVFAPSAEQLLDDLDVALLGIRDVSSSRLGHVTIACVPSVAYYFLPNVIASYHRRFPR 123 Query: 126 ATIKLRNWD-YDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 +KL + + L A+ GE D G S + S ID+++L + Sbjct: 124 IRVKLLDAGANEVLSAVISGEADFGVSF----------MGSQEPEIDFKLLLQERFVAAC 173 Query: 185 RKDHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 R+DHP + + Y ++S+ + LD L + L Sbjct: 174 RRDHPLARKKRVTWNELYEYEYVSVDKTSGNRLLLDQALTTVAPRAPSVCETRHVTTLLG 233 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPF 278 + L +A P + L V L P Sbjct: 234 LIEA--GLGVAAVPSMAMPGHDHPLLTSVPLVEPV 266 >UniRef50_A1W2B9 Transcriptional regulator, LysR family n=6 Tax=Comamonadaceae RepID=A1W2B9_ACISJ Length = 308 Score = 147 bits (372), Expect = 5e-34, Method: Composition-based stats. Identities = 45/315 (14%), Positives = 96/315 (30%), Gaps = 23/315 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L + + +T++A + VT S +S L +L A PLF GL + Sbjct: 1 MELRQLRYFLSVAETEHLTRSADVLFVTQSTLSHGLRQLEAELGVPLFDRLGRGLRLSQA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTP-RGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + A +Q + + ++ + + RYP Sbjct: 61 GHAFRDHAARALQELEARRQAVADMSALQTGTLQVGVIPTFLTRFVPDAVAAFSARYPGV 120 Query: 127 TIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + +R+ + + G +D+G + + I+ E LF + + + Sbjct: 121 QLTVRDLRSGQIEELLIAGRLDLGIAFHPASRE----------EIEAEPLFEERMHLVVH 170 Query: 186 KDHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 + HP Q L P + + +D + G + + + + L Sbjct: 171 QGHPLARRQRLRLAELAGVPLALLPASFATRRLIDAAFAQAGVTPLVRVEMESVDALLQA 230 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 L A + + + + + LLW + S + Sbjct: 231 CRS--GPLATIAAEHAALHAG--------PDMRAAVLTEPRTVRRAGLLWRRGASRSAAA 280 Query: 305 VWLRETIKNLYASMA 319 ++ A A Sbjct: 281 REFVALLRPAIARTA 295 >UniRef50_UPI00016A8F80 Transcriptional regulator n=1 Tax=Burkholderia pseudomallei DM98 RepID=UPI00016A8F80 Length = 234 Score = 147 bits (372), Expect = 6e-34, Method: Composition-based stats. Identities = 48/233 (20%), Positives = 80/233 (34%), Gaps = 21/233 (9%) Query: 89 PHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQATIKLRNWDY--DSLDAITRGEV 146 P F +AA L + L + P A I++ + + D A+ G + Sbjct: 13 PFDPDTARRTFRIAAPDYLNDFFMPTLVARFRAAAPHARIEIDSLNPSLDHAGALDSGAL 72 Query: 147 DIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPALHQTWNLDTFLRYPHI 206 D+ LFSD +R+DHP D + H+ Sbjct: 73 DLVIGNWPKP----------DPRFVRTDLFSDTVVCLMRRDHPLARAPLTRDAYANALHL 122 Query: 207 SICW-EQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQPDNLLLATAPRYCQYYNQ 265 + + A++ L G R +A +LP F + Q D + T R+ +Y + Sbjct: 123 APAPYIGARNNAIELGLARAGIARRVAATLPYFGLVPQVLLQSDLIFTTT-RRFAIHYAR 181 Query: 266 LHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWLRETIKNLYASM 318 L L +VA P+PF + L H WL + ++ A + Sbjct: 182 LLPLVVVAPPVPFPRIRC-------YQLRHPAPDRPTDADWLSALMADVSAEL 227 >UniRef50_B9KUK0 Transcriptional regulator n=2 Tax=Rhodobacteraceae RepID=B9KUK0_RHOSK Length = 300 Score = 147 bits (372), Expect = 6e-34, Method: Composition-based stats. Identities = 45/292 (15%), Positives = 92/292 (31%), Gaps = 18/292 (6%) Query: 1 MKKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPL 60 M + LD L ++ S KAA+ +N++ A+++ + + LF S Sbjct: 1 MSINFELLD---LRTFLAIIDLGSFRKAAEALNISQPALTRRMQAFEYKLGNQLFERSTR 57 Query: 61 GLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQ-TPRGLKFELAAESPLMMIMLNALSKQI 119 +S T + +E + + R +A + L ++ + Sbjct: 58 NVSLTNVGREIEPMARRTLAEIDEQFGSLSDAGATRSGFISIACIPTSTLSFLPSVIGRF 117 Query: 120 YQRYPQATIKLR-NWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSD 178 +P+A ++ N LD++ G D G + + LF D Sbjct: 118 QTDFPRARFRILDNSSAQVLDSVFDGTADFGLTFTGQSDSQ----------FKFTALFED 167 Query: 179 VPCVWLRKDHPALHQ-TWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPE 237 P + P I + + +D L + G + A + Sbjct: 168 EFVALCAPGDPIAQKARIAWSELNTLPLIGVNRSSGNRTLMDTRLSKDGIKLNWAHEVNH 227 Query: 238 FEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVP 289 ++ + Q + ++ PR + L ++ L P + LE Sbjct: 228 VIAAVGLVRQ--AVGVSVVPRMAYDPRLMGDLRIIPLVNPVVSRRLGILERS 277 >UniRef50_P37499 Uncharacterized HTH-type transcriptional regulator yybE n=4 Tax=Bacillales RepID=YYBE_BACSU Length = 292 Score = 147 bits (372), Expect = 6e-34, Method: Composition-based stats. Identities = 49/257 (19%), Positives = 91/257 (35%), Gaps = 27/257 (10%) Query: 12 LLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSM 71 L Q L + + VTKAAK +++T A+S+S+A+L PLF +S Sbjct: 5 QLEYFQTLARMQHVTKAAKSLSITQPALSRSIARLENHLGVPLFDRQGRSISLNQYGHIF 64 Query: 72 EQNLAEWM-------QMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYP 124 + + M + LL P L L ++ L Q YP Sbjct: 65 LRRVQAMMKEYTEGKEEIQALL------KPDQGVVSLGFLHTLGTTLVPDLIGSFQQEYP 118 Query: 125 QATIKL-RNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVW 183 + +L +N Y L+ + G++D+ + + L+S+ V+ Sbjct: 119 NISFQLKQNHSYWLLERLKSGDLDLCLLASIKPENPIQWI----------KLWSEELFVF 168 Query: 184 LRKDHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 + DHP ++ L+ I + + +D + ++ + I E + Sbjct: 169 VPNDHPLASRESITLNEIAGERFILLKKGYALRMTVDELFEKANIQPNIMFEGEEATTAA 228 Query: 243 FMAAQPDNLLLATAPRY 259 A L ++ P Sbjct: 229 GFVAA--GLGISILPDL 243 >UniRef50_C1M9D8 Predicted protein n=2 Tax=Citrobacter RepID=C1M9D8_9ENTR Length = 308 Score = 147 bits (371), Expect = 7e-34, Method: Composition-based stats. Identities = 53/287 (18%), Positives = 106/287 (36%), Gaps = 28/287 (9%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 ++++ +DLNLL L+ S+++ A +N++PSAVS+SL KLR D LFV S L Sbjct: 11 RTLSKIDLNLLTIFCLIYSVGSISRVADMLNISPSAVSQSLRKLREMMGDNLFVRSGNAL 70 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQR 122 PT + N + + L+ + L ES + I++ ++ +I + Sbjct: 71 LPTVYSDELYDNTIPIIDKLSTLM-PLSTPATKKR-LTLYTESFISPIVIPDVTARIIET 128 Query: 123 YPQATIKLRNWDYD-----SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFS 177 A I L + D ++ + + D FS + ++ + + Sbjct: 129 --DADISLLHLTADLNEQSIIELLNMRQADAVFST----------FAVESASLSCQKICD 176 Query: 178 DVPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSD----TWALDNVLQELGRERTIAM 233 + +++ T + F + + +D G + Sbjct: 177 MRLVLAASQNNSLYGNTISEAQFRNANLVGYNTKNEKIIYHRSIVDKKF-RTGER---CL 232 Query: 234 SLPEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDE 280 F L + + L + + + + QL+ L + P P + Sbjct: 233 LTSSFTAILTIVSNTHCLGV-IPEKVFETHAQLYGLKKINTPFPLPQ 278 >UniRef50_B5JN19 Putative uncharacterized protein n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JN19_9BACT Length = 296 Score = 146 bits (369), Expect = 1e-33, Method: Composition-based stats. Identities = 43/299 (14%), Positives = 96/299 (32%), Gaps = 21/299 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L + +++ E +AA+++N+ A+S + +L LF G+ T Sbjct: 1 MELRQIRSFRVVAAEEHFRRAAEKLNIAQPALSLQVRQLEEELGTQLFERVGRGVRLTDA 60 Query: 68 MVSMEQNLAEWMQMS-NLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + H + + A+ +RYPQ Sbjct: 61 GSLFWDYADRIVSLVDESAEATREHSDLIRGRLRIGIAQTPNCCFGPAVISAFKRRYPQV 120 Query: 127 TIKLRNWDYDSLD-AITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + L D ++ ++ +GE+D+G + E ++ + Sbjct: 121 FVSLAELAADEIESSLLKGELDLGIGFGPCD----------SPNLSSESIYEERFVALAP 170 Query: 186 KDHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 + HP + +L T + I + + + +L +A+ + E + Sbjct: 171 RGHPWFNKKNISLKTLAQEELILLTRDYCTRRIFEKTCDDLDVSLKVAIEMNTIEGIIAS 230 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 L + P Q+ PL++ L Q + L++ K +P Sbjct: 231 LESTG--LASVLP------AQIVNSPLMSPTLRSVPIAQPGIRRKVALVYRKSGYLSPA 281 >UniRef50_A9W9P6 LysR substrate-binding n=3 Tax=Chloroflexus RepID=A9W9P6_CHLAA Length = 301 Score = 146 bits (369), Expect = 1e-33, Method: Composition-based stats. Identities = 51/313 (16%), Positives = 95/313 (30%), Gaps = 24/313 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L + + + VT+AA +++ A+SK +++L LF L T Sbjct: 1 MELRHLRYFEAVARHSHVTRAAAELHIAQPALSKQISQLERELGITLFDRVGRSLRLTEA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDK-PHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 ++ + + + + A + +L L +QRYP Sbjct: 61 GEALLPYARAILAQVEEARAAMAERIGLKAGRVTIGAPPTVGAHLLPPLLTIFHQRYPGI 120 Query: 127 TIKLRNWDYDS-LDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 T++L S LD + G D+ L + L ++ + + Sbjct: 121 TLRLHEAGIQSLLDLLEAGITDLAV----------VALPVTDEQLTVTPLLNEPLVLIVS 170 Query: 186 KDHPALHQ-TWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 HP + + I A +E G + E E + Sbjct: 171 TTHPLARRSEVMMTELRHERWILSPSSYELREATLKACREAGFTPQTVLEGGETETLVRF 230 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 A L ++ P +V L + L L+W + +P Sbjct: 231 VAA--GLGVSLVPALAVAGCT----DVVRL-----TVSDQHLTRSLGLVWRSDRTASPAA 279 Query: 305 VWLRETIKNLYAS 317 LRE + N Sbjct: 280 RALREFLVNEVRQ 292 >UniRef50_Q1R0T5 Transcriptional regulator, LysR family n=2 Tax=Chromohalobacter RepID=Q1R0T5_CHRSD Length = 310 Score = 146 bits (369), Expect = 1e-33, Method: Composition-based stats. Identities = 50/277 (18%), Positives = 104/277 (37%), Gaps = 14/277 (5%) Query: 6 TTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPT 65 + L L+ Q + + +S+ KAA+ +++T A+SK++ +L D LF SP G + T Sbjct: 4 ARVKLRHLMAFQEVARLQSLAKAAQALSITQPAMSKTIRELEEMLDATLFERSPQGATLT 63 Query: 66 PLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQ 125 ++ ++ ++ + A S + +L ++++R P Sbjct: 64 AAGQTLLRHAGPALRSLGEGFQAVRDAAQHDTVVRMGALSTVEEGLLPLALHRLHRRAPA 123 Query: 126 ATIKLRN-WDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 + + L + GE+D R + +E L+ + + + Sbjct: 124 LRVHVVTGPSAYLLSRLRAGELDAVAGRMSEAREIR--------GLQFEHLYYEPLVLAV 175 Query: 185 RKDHPALHQTWNL-DTFLRYPHISICWEQSDTWALDN-VLQELGRERTIAMSLPEFEQSL 242 R DHP L + + YP I + ++ ++ G IA+ S Sbjct: 176 RVDHPLLASKARVDEELGAYPWIVPPTSTTLRDQVERFWVERGGTPPRIALETLSLPLSR 235 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFD 279 A + D + +A + +H+ L LP+ + Sbjct: 236 RYAMRSDAVWVAPLD---AVRDDMHEGRLRRLPVRLE 269 >UniRef50_D2P368 Transcription activator of glutamate synthase operon GltC n=18 Tax=Listeria RepID=D2P368_LISMO Length = 295 Score = 146 bits (369), Expect = 1e-33, Method: Composition-based stats. Identities = 48/312 (15%), Positives = 103/312 (33%), Gaps = 21/312 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L + + +TKA++ ++V SAVS+ + KL LF + T + Sbjct: 1 MELRQLKYFMEVARVEHMTKASENLHVAQSAVSRQITKLEEELGVHLFDRVGRNMQLTSV 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQ-TPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + A + P + + L +L ++ ++YPQ Sbjct: 61 GQDFLKQAAIALNELQKAEALVTEYTDPAKGTVRVGLPNSLSTKVLPSVISTFREKYPQI 120 Query: 127 TIKLRN-WDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 T + + + + + G +D+ F + I+ F + + + Sbjct: 121 TYQFMEGTNEELTEMLLSGVLDMTF---------LSPVPESSEQIEAIRFFDEKLKLIVP 171 Query: 186 KDHPALHQ-TWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 K HP T +L + + + + G E IA +F + Sbjct: 172 KTHPLAENFTVSLKELASEKFVLYPEDFDLYKIVTKAANKKGFEPQIAFQSRDFYTIQGL 231 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 L ++ P + +AL + K+L ++ K+ + +P Sbjct: 232 VGA--GLGISILPEMILDGAIFKETKSIAL-------RDKELRRSVGIITTKKRNLSPSE 282 Query: 305 VWLRETIKNLYA 316 R I + ++ Sbjct: 283 NLFRSFIISFFS 294 >UniRef50_D2B6U1 DNA-binding transcriptional regulator CynR n=1 Tax=Streptosporangium roseum DSM 43021 RepID=D2B6U1_STRRD Length = 301 Score = 145 bits (368), Expect = 1e-33, Method: Composition-based stats. Identities = 33/271 (12%), Positives = 84/271 (30%), Gaps = 21/271 (7%) Query: 10 LNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMV 69 L L L + + + T+AA+ + ++ +S+ + +L L S + T Sbjct: 5 LRHLRYLIAVAEHGNFTRAAEDLRISQPTLSQQIKQLERAVGVQLLDRSGRSVRLTDAGE 64 Query: 70 SMEQNLAEWMQMSNLLLDKPHH-QTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQATI 128 + ++ + LAA ++ L +++ R+P T+ Sbjct: 65 AYVHYARRALRDLSAAERAVFDVADLSRGSLRLAATPTFTAYLIGPLIAEMHARHPGITL 124 Query: 129 KLRNWDYDSLDA-ITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKD 187 ++ D +++ + E+D+G + + H I LF + + + Sbjct: 125 DVKEMTQDRIESGLLADELDLGIAFCDRHL----------PGIGGTALFMETLSLVVSAH 174 Query: 188 -----HPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 H + + E + +D + I + + + Sbjct: 175 DSDGEHLR---PMPVRDLATRRLALLSGEFATRGHIDAYFRRQSVSPRIVVEANSIQALI 231 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVA 273 + + ++ + L +PL Sbjct: 232 EIVQRS-SVATVLPDAVTHDHPGLSPIPLAP 261 >UniRef50_Q7WNL7 LysR-family transcriptional regulator n=1 Tax=Bordetella bronchiseptica RepID=Q7WNL7_BORBR Length = 303 Score = 145 bits (367), Expect = 2e-33, Method: Composition-based stats. Identities = 60/281 (21%), Positives = 101/281 (35%), Gaps = 18/281 (6%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 DL L + +ERS++KAA+R + PSA+SK + + + LF+ + G+ Sbjct: 1 MQRLRFDLVTLRLFVAVYEERSLSKAAEREFIAPSALSKRITDMEQMLNRELFIRNHRGI 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQIYQ 121 PTPL M + M+ + + H + L Q Sbjct: 61 EPTPLAEQMMPYVRNVMRDLAQMSEMAHGDEHGISGYVRIITTMAATCQYLPRELALFLQ 120 Query: 122 RYPQATIKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 RYP + L+ + DA+ G D+G ++ ++ DV Sbjct: 121 RYPGIRVDLQEDVSQIVADAVHEGTADLGIMFAGANTAGLQMFPY----------HMDVL 170 Query: 181 CVWLRKDHPALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFE 239 + DHP L L Y + + + +ELGR+ M + F+ Sbjct: 171 TALVPNDHPLASCAALKLGQLLDYEIVGPRKGSTLESLILQAARELGRDIKPRMRISAFD 230 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDE 280 M ++L +A PR +Y + P+P DE Sbjct: 231 TLCQMV--HEDLGVAVVPR---HYLNQINRAIAVTPVPLDE 266 >UniRef50_A3QFK5 Transcriptional regulator, LysR family n=69 Tax=Gammaproteobacteria RepID=A3QFK5_SHELP Length = 304 Score = 145 bits (367), Expect = 2e-33, Method: Composition-based stats. Identities = 52/312 (16%), Positives = 105/312 (33%), Gaps = 24/312 (7%) Query: 10 LNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMV 69 L ++ + SV+ AA+++++T SAVS SL +L PLF+ L+ + Sbjct: 5 LKQIMVFDAVASLESVSAAARKLSMTQSAVSMSLGQLENLLGRPLFIRQGNRLTLSHWGN 64 Query: 70 SMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQATIK 129 + +Q + + H Q +F L + +L L +I +P+ I+ Sbjct: 65 WLRPRARRLLQDAQQIELGLHEQHLISGRFRLCSSQTAAEHLLPELISKIDTDFPELRIE 124 Query: 130 L-RNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDH 188 L + ++ + E D G + + E D V H Sbjct: 125 LTVENTENVVEGLLNYEYDFGIIEGRNDDSR----------LYQEQWLDDHLVVVASPHH 174 Query: 189 PALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQ 247 P QT +L + + + + + + + + Sbjct: 175 PYAKQTNISLAQLEQARWVLREQGAGTRRIFEGAIHGVIEKLHVWKEYEHVSLLKALVKN 234 Query: 248 PDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWL 307 L ++ P + ++ LV LP P Q ++ + +W + NP L Sbjct: 235 GPYL--SSLP-FLDVEKEVAAGELVILPTP-----QLNMQRHLSFVWRCDSGENP----L 282 Query: 308 RETIKNLYASMA 319 R+ + ++ Sbjct: 283 RDCVITEARRLS 294 >UniRef50_A6W0Q8 Transcriptional regulator, LysR family n=2 Tax=Marinomonas RepID=A6W0Q8_MARMS Length = 295 Score = 145 bits (366), Expect = 2e-33, Method: Composition-based stats. Identities = 40/274 (14%), Positives = 81/274 (29%), Gaps = 16/274 (5%) Query: 7 TLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTP 66 + L L + ++ SVT AA+ ++++ A S++L +L A PLF L TP Sbjct: 2 RITLRQLQIFEAVVHTGSVTAAAEMVSISQPAASQALRELEALLGRPLFRRHGKRLQITP 61 Query: 67 LMVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + ++ ++ LAA + +L +++P Sbjct: 62 QARHLLPQARAVLSQIEQ-IESMGNEDELSGSLHLAASVSVGNYLLPKQMSLFKRQHPNI 120 Query: 127 TIKL-RNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 L + + G+ ++GF + +V D V+ Sbjct: 121 RFNLDIGNTQSVIQQLLTGKAEVGFIEGY----------CQHAELMTQVWLKDELVVFGS 170 Query: 186 KDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMA 245 + + + + + L+ + + +SL E Sbjct: 171 AEEER-PKNLSWEDLKEASWVMRESGSGTRNILEQATAAQIPQLNVVLSLAHMEAVKQAV 229 Query: 246 AQPDNLLLATAPRYCQYYNQLHQL-PLVALPLPF 278 + L R L L PL Sbjct: 230 IH--QMGLGCLSRMAISQELNAGLIRLYQTPLEL 261 >UniRef50_B5JQV8 LysR substrate binding domain protein n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JQV8_9BACT Length = 300 Score = 145 bits (366), Expect = 2e-33, Method: Composition-based stats. Identities = 40/314 (12%), Positives = 95/314 (30%), Gaps = 27/314 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L+ L + + + T+AA++ V+ ++S + KL LF T Sbjct: 1 MELHQLRYFLAVAEAGNFTRAAEKCFVSQPSLSAQIIKLEGELGQKLFNRLGRRAELTRA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 +E + + ++ + ++ + + +RYP Sbjct: 61 GTFLESRARTILMEVENAERQIKENEEDIRGIVKVGVTPSVTPYLIPPVIRMCRERYPNL 120 Query: 127 TIKLR-NWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 I ++ N +D + +G +++ S ID E + + + + Sbjct: 121 EINIQENLRRRLIDEVQQGHLEVAISSYTGDA----------ANIDAEPILQEDLVLAVS 170 Query: 186 KDHPAL--HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 K H +++ F P + + + + + ++ E + + Sbjct: 171 KTHRLATQKSKVSIEDFKDEPLVLLGESATLGDKVFDFFDKMNIEPKVVALCSQVRSVKE 230 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVP--FTLLWHKRNSHN 301 M L +A P + LP + L H R + Sbjct: 231 MVNL--GLGVAILPAMAKE---------EHLPFEIVYRSLVSERMKRLLFALTHSRRYLS 279 Query: 302 PKIVWLRETIKNLY 315 P + I+ + Sbjct: 280 PGARVFVDLIREVA 293 >UniRef50_A6UGP0 Transcriptional regulator, LysR family n=2 Tax=Sinorhizobium RepID=A6UGP0_SINMW Length = 298 Score = 145 bits (366), Expect = 2e-33, Method: Composition-based stats. Identities = 50/272 (18%), Positives = 90/272 (33%), Gaps = 15/272 (5%) Query: 10 LNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMV 69 L L + + AA + +T SA+S + L A LF +S T Sbjct: 5 LRQLQAFIAVAELGRFHLAADHLGLTQSAISILIRDLEAVLKHRLFDRHTRMVSLTTAGA 64 Query: 70 SMEQNLAEWMQMSNLLLDKPHHQTPRGL-KFELAAESPLMMIMLNALSKQIYQRYPQATI 128 + M + + H + +AA L +L + + +RYP + Sbjct: 65 EFLPQARKIMSDLEIAVTNVHELANLQRGRVTIAAAIVLAATLLPPVIARFVKRYPDIQV 124 Query: 129 KLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKD 187 ++R+ + + A+ R E D+G +S+ I VL D + R D Sbjct: 125 QVRDMPEEEIRSALKRNEADLGIGT----------VSADDPEIQASVLMRDQLTLICRSD 174 Query: 188 HPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAA 246 H + I + + +D+ L G E + ++ M A Sbjct: 175 HRFARAPQVSWANLAGEALIGLAKDNPLRGLVDHALIASGVEVKTRYEVRFSTTAISMVA 234 Query: 247 QPDNLLLATAPRYCQYYNQLHQLPLVALPLPF 278 + L +A P + + +V L P Sbjct: 235 E--GLGIAILPENSRQLTTNVDVRIVDLVDPV 264 >UniRef50_A8IAC4 Transcriptional regulator n=1 Tax=Azorhizobium caulinodans ORS 571 RepID=A8IAC4_AZOC5 Length = 313 Score = 145 bits (366), Expect = 3e-33, Method: Composition-based stats. Identities = 36/277 (12%), Positives = 90/277 (32%), Gaps = 21/277 (7%) Query: 1 MKKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPL 60 M ++ +L L + Q S ++AA+ + ++ SA+S+++ +L A L + Sbjct: 1 MSMNM---NLRQLRAFVAVAQTGSFSRAARLLGLSQSALSQAVQQLEADLGVRLLDRTTR 57 Query: 61 GLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGL-KFELAAESPLMMIMLNALSKQI 119 + + + + + + L + + + +L + Q Sbjct: 58 SVQLSAIGREFLPGVQRVLADLDHQLQDLRDLKEHRRGHVTVTCVPSVALRLLPQVLAQF 117 Query: 120 YQRYPQATIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSD 178 + +P ++ +R + A+ G+ ++G + + +D L +D Sbjct: 118 QEAHPMVSVAVREAPRHQIITALRSGDAELGVAN----------VPGDDPDLDSTFLLTD 167 Query: 179 VPCVWLRKDHPALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPE 237 + +R+DHP ++ + + I++ ++ L Sbjct: 168 SFALVMRRDHPLAAHESVTWEEAGQAGLIAMAPGTGIRLEMERGLPAPAVPHH---EAEH 224 Query: 238 FEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVAL 274 L M + +A P L L Sbjct: 225 PATLLAMVEA--GVGVAPLPGLAWPRPDHAGLTFRPL 259 >UniRef50_A3VLP1 LysR family transcriptional regulatory protein n=1 Tax=Rhodobacterales bacterium HTCC2654 RepID=A3VLP1_9RHOB Length = 325 Score = 144 bits (365), Expect = 3e-33, Method: Composition-based stats. Identities = 35/298 (11%), Positives = 95/298 (31%), Gaps = 25/298 (8%) Query: 4 SITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLS 63 + ++L L + +E + T+AA+R+ + +S+ + L LF+ S + Sbjct: 6 DLPKVELRQLRYFLAVAEELNFTRAAERMGIAQPPLSQQIISLEHQLGAKLFIRSCRRVK 65 Query: 64 PTPLMVSMEQNLAEWMQMSNLLLDKPHH-QTPRGLKFELAAESPLMMIMLNALSKQIYQR 122 T + ++ + + L + + + L + + ++ + Sbjct: 66 LTAEGIELQAYARRIINTTMLATESIRSIANGKNGQIALGSVCSAIHSLVPHILPPFAAL 125 Query: 123 YPQATIKLRNWD-YDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPC 181 +P + L+ + A+ +DI + LF++ Sbjct: 126 HPGVRVHLQEMTVKEQFRALNEERIDIAIVREPMAT----------TEFATQPLFTEPFV 175 Query: 182 VWLRKDHPALH-QTWNLDTFLRYPHISI--CWEQSDTWALDNVLQELGRERTIAMSLPEF 238 + ++ P +L+ R P + + + + + + L E G E + + Sbjct: 176 AAVNRNSPLARMNRLSLEQIAREPLVQVYRSANREYSDHMFSALMEQGYELNVVCEASDM 235 Query: 239 EQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHK 296 L + A + ++ P + + + + +L W+ Sbjct: 236 HSLLGLVAS--GIGVSLVPASL--------VNIQTANVIYVPLSDDVQSSTLSLAWNP 283 >UniRef50_C4ZHT7 Transcription activator of glutamate synthase(LysR family) n=6 Tax=Clostridiales RepID=C4ZHT7_EUBR3 Length = 293 Score = 144 bits (365), Expect = 4e-33, Method: Composition-based stats. Identities = 47/276 (17%), Positives = 101/276 (36%), Gaps = 18/276 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L+ L ++L QE T+AA+ +++T ++S ++++L LF + T Sbjct: 1 MNLSQLQYFKVLAQEEHYTRAAQMLSITQPSLSHAISQLEQELGTRLFEKKGRNVVLTRY 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + E +++ N + + LA + L ++ YP Sbjct: 61 GKMFLPYVEESLKVLNEGVQRIQEVNGSRHGIIHLAYIYTMGSEFAPKLVRKFLDAYPDY 120 Query: 127 TIKL---RNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVW 183 I+ + +D + + DI FS + + ID++ + + + Sbjct: 121 DIEFHFTVGTTGEIIDGLKDDKYDIVFSSYKDGEQ----------DIDFKKIANQKLVLA 170 Query: 184 LRKDHPA-LHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 + DHP + + +L + YP I +D + +E+G+ +A + E Sbjct: 171 VPMDHPLSIKDSVDLRDTIEYPQIYFEKGSGLRPVIDQMFEEIGQFPKVAFEMEEDSSMA 230 Query: 243 FMAAQPDNLLLATAPRY-CQYYNQLHQLPLVALPLP 277 + AQ +A P + L + P Sbjct: 231 GLVAQ--GFGIAVMPDIPILRSLSVKTLDIYNPPYE 264 >UniRef50_B1Y0L4 Transcriptional regulator, LysR family n=2 Tax=Burkholderiales RepID=B1Y0L4_LEPCP Length = 298 Score = 144 bits (364), Expect = 4e-33, Method: Composition-based stats. Identities = 38/270 (14%), Positives = 81/270 (30%), Gaps = 14/270 (5%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +DL L + + + + +A +R++ T A++ S+ +L PLF + G+ T Sbjct: 1 MDLRDLRYFETIAELEHIGRATERLHRTQPALTSSVRRLEEAVGAPLFEKAGRGIRLTQA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQT-PRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + + + +L ++Q+ P+ Sbjct: 61 GKVLLKWAQRVRFDVEDARREIGDIDRGLSGHIRIGIVPTAAQFILPPAARQLMSVAPEV 120 Query: 127 TIKLRNWDYDSLD-AITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 T++ D+L + GE+D+ + + L D V Sbjct: 121 TLRTVVGLIDTLKPLLHAGELDLMVATESPPE----------AGFTSQRLAEDPIVVAAS 170 Query: 186 KDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRER-TIAMSLPEFEQSLFM 244 HP L ++ + LD+ R + + + Sbjct: 171 ATHPIFANPPTLRDLTKFRWVLQPPGAPTRDWLDHTFDRKRLPRPQVQVESTMLLMLPAL 230 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVAL 274 A+ LL + + + L V L Sbjct: 231 IAET-GLLSFISRHHLGPFESRSPLKEVPL 259 >UniRef50_A5W321 Transcriptional regulator, LysR family n=3 Tax=Pseudomonas putida RepID=A5W321_PSEP1 Length = 293 Score = 144 bits (364), Expect = 4e-33, Method: Composition-based stats. Identities = 45/290 (15%), Positives = 97/290 (33%), Gaps = 25/290 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L C ++++ S TKAA+ +++ A+S ++ +L LF + + T Sbjct: 1 MNLKALRCCVEIVRQGSFTKAAQHLHIAQPALSMAVTRLEEELGVTLFNRTTRKVILTAE 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHH-QTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 +A ++ ++ + + + L + + L + YP Sbjct: 61 GEQFLPRIASALREMDVARQELRDMADLKRGEVRLGIPPMFGLHYVPGLMNAFRKSYPGI 120 Query: 127 TIKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + + + + + + E+D+ +P + +L SD + Sbjct: 121 AMTVFEGSAEDIGHRLEQREIDLAL----------LESRRVPPDKESILLGSDEMLACMH 170 Query: 186 KDHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 DHP + + + LD E G +A+ + Sbjct: 171 PDHPYAGKAYLTAEDLRNTDMVVFDRTFVQRHLLDAFFAEHGITYQVALQSNFVSLVVQA 230 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLW 294 A DN+ +AT R Q +V +P + ++ F L W Sbjct: 231 AL--DNMGVATLLRSVQQ----RTPGIVGVPF------RPAQQMSFRLCW 268 >UniRef50_B2T7R4 Transcriptional regulator, LysR family n=5 Tax=Burkholderia RepID=B2T7R4_BURPP Length = 325 Score = 143 bits (363), Expect = 5e-33, Method: Composition-based stats. Identities = 58/317 (18%), Positives = 105/317 (33%), Gaps = 18/317 (5%) Query: 6 TTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPT 65 L LL L + +E +V +AA + +T A S+ L +L + LF +P G+ T Sbjct: 12 ARLKTRQLLLLAAMEEEGNVRRAADVLGMTQPAASRLLKELEDMLEVSLFDRTPHGMHAT 71 Query: 66 PLMVSMEQNLAEWMQMSNLLLDKPHHQTP-RGLKFELAAESPLMMIMLNALSKQIYQRYP 124 M ++ + + D+ + + + M+ + +RYP Sbjct: 72 LYGEVMIRHARMVLSNLSHAHDEISALRSGLAGQVRIGVIAAAAATMVPRAIASVKERYP 131 Query: 125 QATIKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVW 183 Q I D L + GE+DI R E + + YE L + CV Sbjct: 132 QLQIWAEVETSDVMLPRLAEGELDIMIG------RVLERQNQFKTEVRYEPLADEPLCVV 185 Query: 184 LRKDHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRE-RTIAMSLPEFEQS 241 R H ++T L + + D + ++G ++ F Sbjct: 186 ARPGHHLENETGLTLRGIVNASWVLHPPGSVLRHRFDLMFSQIGLNPPQNVVNTNNFLAI 245 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 + Q D L + + Y Q L + + LP + LL + Sbjct: 246 SSLLLQSDMLAV-LPDEVARQYQQYGVLKRIPIDLPCRMDTFGIITRQSHLL-------S 297 Query: 302 PKIVWLRETIKNLYASM 318 P + E ++ + Sbjct: 298 PAASVVLEALREAAGEV 314 >UniRef50_B5GYU9 LysR-family transcriptional regulator (Fragment) n=11 Tax=Streptomyces RepID=B5GYU9_STRCL Length = 340 Score = 143 bits (363), Expect = 6e-33, Method: Composition-based stats. Identities = 40/286 (13%), Positives = 89/286 (31%), Gaps = 11/286 (3%) Query: 11 NLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVS 70 L L+ + S + AA+ + T AVS+ + L PL + + + T Sbjct: 5 RHLRVLRAVATTGSFSAAARALGCTQPAVSQQMKALETSAGTPLLIRTGREMRLTQAGEV 64 Query: 71 MEQNLAEWMQMSNLLLDKPHHQTP-RGLKFELAAESPLMMIMLNALSKQIYQRYPQATIK 129 + ++ + + ++ R + L + ++ + + +P + Sbjct: 65 LVRHASGILAGLTAAEEEVAAIAGLRAGRVRLVSFPSGSSTLVPSALAALRAAHPGTRVS 124 Query: 130 LRNWD-YDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDH 188 L + S++ + G+ D+ + R + + L SD + + H Sbjct: 125 LVEAEPPRSVEMLREGDCDVALAFRYAGAEREAEWG----DLVVRPLLSDRLVGLVPEGH 180 Query: 189 PALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQ 247 T +D P I+ C L V + G I + ++ + + Sbjct: 181 RLAGADTVTIDDLADEPWIAGCPR--CRRQLVEVCESAGFAPRIDFATDDYPTVIGLVGA 238 Query: 248 PDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLL 293 L +A P + VA+ P + + Sbjct: 239 --GLGVAVLPGLALESVRPKGARAVAVEPPVVRKIVALTLPDLSQV 282 >UniRef50_B9Z0I5 Transcriptional regulator, LysR family n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z0I5_9NEIS Length = 298 Score = 143 bits (363), Expect = 6e-33, Method: Composition-based stats. Identities = 44/282 (15%), Positives = 99/282 (35%), Gaps = 17/282 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 + L L + +E+S+ AA+R+++T AV++++ +L + L S G+ T Sbjct: 1 MKLQQLEVFIAVTEEKSLRAAARRLDLTQPAVTRTVQELESDLGVVLMTRSVQGIELTSF 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRGL-KFELAAESPLMMIMLNALSKQIYQRYPQA 126 ++ + ++ + ++ K ++A S + + +L + + P+A Sbjct: 61 GAALRIRAQQLLEDARRAREEMDQLKGDMRGKVTVSATSTIALTLLPQAIDRFQEAAPEA 120 Query: 127 TIKLRNWD-YDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + + + G +D S L L + LF+ V R Sbjct: 121 ELTFLEVKFPQATQHLRDGSIDFLV--------SHVLPDMLDDDLTSIPLFTVDFVVMAR 172 Query: 186 KDHPALHQTWNLDTFLRYPH-ISICWEQSDTWALDNVLQELGRE-RTIAMSLPEFEQSLF 243 + HP + L ++ + ++ + Q+ G + F +L Sbjct: 173 EQHPLRNAR-RLAELAEAQWSTTVTSGGTQHSVMEALFQQEGLPLPRRLIQCSSFAIALG 231 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKK 285 + + D L+ + Q L L +PL + Sbjct: 232 LVSGTDT-LVLFSRLLAQRIAD---LGLRQIPLEQPLPALEM 269 >UniRef50_C5T5G2 Transcriptional regulator, LysR family n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T5G2_ACIDE Length = 294 Score = 143 bits (362), Expect = 7e-33, Method: Composition-based stats. Identities = 41/243 (16%), Positives = 90/243 (37%), Gaps = 13/243 (5%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 LDL L ++QE +T+AA+R++++ A S + L F LF+ + GL PT Sbjct: 2 LDLTHLRTFVAVVQEGHLTRAAERLHMSQPAASHHIRALEDHFGVALFIRNARGLEPTAA 61 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAES-PLMMIMLNALSKQIYQRYPQ 125 + + Q + + L + + P + L AL + + Q +P Sbjct: 62 GLRLAQGANRVLSSTMELDGLARELQGSLSGRLVIGTVDEPNLFRRLAALVQWVRQHHPL 121 Query: 126 ATIKLRNWDYDSLDA-ITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 + + + ++ + GE+D+GF + ++LP +D + + + Sbjct: 122 VELCIEGRNSRAVTQGLHAGEIDVGF----------FVGAALPQGMDGFQVGALEFVLAA 171 Query: 185 RKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 + + P I + + ++ + + G + +A+ + M Sbjct: 172 PSHWREQLRGADWSDLAALPWIVLSAGTAHADIVEGLFRPHGLKVNVALEVSNEALLRAM 231 Query: 245 AAQ 247 Sbjct: 232 IRG 234 >UniRef50_B2JL76 Transcriptional regulator, LysR family n=10 Tax=Burkholderia RepID=B2JL76_BURP8 Length = 335 Score = 143 bits (362), Expect = 7e-33, Method: Composition-based stats. Identities = 43/320 (13%), Positives = 105/320 (32%), Gaps = 32/320 (10%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +D+ L ++ S++KAA+R+ V ++S+ + L A L + SP G++PT Sbjct: 1 MDVRQLKYFVTIVDSCSLSKAAERLFVAQPSLSQQILNLEAELKAQLLIRSPQGVAPTEA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNALSKQIYQRYPQA 126 ++ + + ++ + + + + + + ++ L +++ Q+YP Sbjct: 61 GKALYRLSRDVLRRMDQIRQEVQDGGGSESGTVAIGFPTTIASVLAAPLFQRVRQKYPGI 120 Query: 127 TIK-LRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 ++ + + + G +D+ R++ L + LF + V Sbjct: 121 RLQIFESMSGYITELLANGRLDLAILFRDTE----------SLGVSVHPLFDEDLYVV-- 168 Query: 186 KDHPALHQTWNLDT-------FLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEF 238 HP +D P ++ ++ + I + Sbjct: 169 -GHPVSK--LCVDDEVCPLKFLGNVPLVTPGPTNGLRLLIERTFSRADVDLNIVADIDSL 225 Query: 239 EQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRN 298 L +A + A + + P + + P +L W+ Sbjct: 226 PTMLDIAESGVACTVLPASALARRHFNNRP--------PIRKIVDPGMNRPASLCWNNAV 277 Query: 299 SHNPKIVWLRETIKNLYASM 318 +R + L A + Sbjct: 278 PTIAATQVVRSAMIELIAEL 297 >UniRef50_A6SW66 Transcriptional regulator, LysR family n=1 Tax=Janthinobacterium sp. Marseille RepID=A6SW66_JANMA Length = 289 Score = 143 bits (362), Expect = 7e-33, Method: Composition-based stats. Identities = 46/311 (14%), Positives = 97/311 (31%), Gaps = 25/311 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L Q +S T+A++ +++T +S + ++ LF + T Sbjct: 1 MELRHLRYFLAAAQSQSFTRASESLHITQPTLSHQIKQIEDELGIQLFDRVGRVVKLTTA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + + LD + + S L + + YP Sbjct: 61 GELFQVYAKRALLEVDAGLDALNELENLKHGRVTFGVLSSFGTFHLPPILADFNKVYPGI 120 Query: 127 TIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 I + + + + G++ G + S I+ E LF+ + + Sbjct: 121 KITVLRLRSGEIEERLLDGDLHFGVAYAPSSTEQ----------INVEPLFTVPLALVVG 170 Query: 186 KDHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 HP + L+ + + + E + +D +L G I M + E L Sbjct: 171 DHHPLVGSAGITLNELNEHELVMLSDEYNSRKMMDAILLANGITPRIVMEMNAIEPILAT 230 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 +L + LHQ+PL + L + + + Sbjct: 231 VRHS-SLATILSANLVDEMPGLHQVPLTP-----------TVTHTVGLFTRRNSHLSAAA 278 Query: 305 VWLRETIKNLY 315 L +TI+ + Sbjct: 279 RALVDTIRQRF 289 >UniRef50_B9Z0M9 Transcriptional regulator, LysR family n=2 Tax=Betaproteobacteria RepID=B9Z0M9_9NEIS Length = 316 Score = 143 bits (362), Expect = 8e-33, Method: Composition-based stats. Identities = 42/280 (15%), Positives = 85/280 (30%), Gaps = 16/280 (5%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +D+ L L + + SVT+AA+ ++V AVS+ L L LF G+ T Sbjct: 1 MDIKQLRALIAVAETGSVTRAAEMLHVVQPAVSRQLRLLEEDIGAALFERGRYGMELTEQ 60 Query: 68 MVSMEQNLAEWMQMSNLLLDK-PHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + ++ + + + ++ + L + YP Sbjct: 61 GEILAEYTRRALRELDRARAEIQPTSATIQGIVTIGLLPSTADLLASPLLTTVSSLYPGV 120 Query: 127 TIKL-RNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 +++ + + + GEVD ++ L + V Sbjct: 121 RLRISIGFAGHLQNWLESGEVDAALLYDPKP----------SPMLNVSPLLEENLWVVGP 170 Query: 186 K-DHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 + A + +L P I + +++ +E + + + Sbjct: 171 ASSNFAAERPVSLAELAGVPLILPSAPHALRTLVEHAFALAKQEVKVVVETNAMSVQRNL 230 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQK 284 L P + L L A PL E Q+K Sbjct: 231 VLAGHGL--TILPSIAVADDIARGL-LKAAPLTSPELQRK 267 >UniRef50_C1F7X5 Transcriptional regulator, LysR family n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F7X5_ACIC5 Length = 305 Score = 143 bits (362), Expect = 8e-33, Method: Composition-based stats. Identities = 51/310 (16%), Positives = 112/310 (36%), Gaps = 22/310 (7%) Query: 10 LNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMV 69 L + + Q + T+AA+ ++V+ SA++ + +L LF + ++ T Sbjct: 5 LRHIRAFLAVAQHANFTRAAQELHVSQSALTVQIQQLEEALGVKLFDRNKRRVALTDAGR 64 Query: 70 SMEQNLAEWMQMSNLLLDKPHHQTPRGL-KFELAAESPLMMIMLNALSKQIYQRYPQATI 128 + L + + ++ + T +A + +L+ + +P I Sbjct: 65 EVIAPLQRIVVDAEAIVSRTREITGLRRGVLSMAVLPSMASGILSTALSRFTAAHPGIMI 124 Query: 129 KLRNWDYDS-LDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKD 187 + + D ++ + + EVD G + + L+ LF+D +L + Sbjct: 125 HIHDVVADQVIEKVKKEEVDFGVATVMHADKELTLMP----------LFTDRLFAFLPEQ 174 Query: 188 HPA-LHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAA 246 HP + +L YP + + S +D L++ G T A +L + Sbjct: 175 HPLSSRASVSLQQISDYPLVLMARGTSVRSMVDQALRDHGLTATAAYEANYMSTALSLVR 234 Query: 247 QPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVW 306 + P L VALP+ + + P +L K S +P + Sbjct: 235 A--GFGIGILPEDAGTMGSAQNL--VALPIVRPQLTR-----PIHVLMRKGRSASPAVQQ 285 Query: 307 LRETIKNLYA 316 + + ++++ Sbjct: 286 MLQILRDITR 295 >UniRef50_A6VZS6 Transcriptional regulator, LysR family n=4 Tax=Gammaproteobacteria RepID=A6VZS6_MARMS Length = 301 Score = 143 bits (362), Expect = 8e-33, Method: Composition-based stats. Identities = 42/265 (15%), Positives = 102/265 (38%), Gaps = 20/265 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L + +E+++T+AA+++ + +++ + +L LF GL+ TP Sbjct: 2 MELRHLRYFCAVAEEKNLTRAAEKLFIAQPPLTRQIKQLEEDVGAQLFDRHSRGLTLTPA 61 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + + ++++++ F + + L +L + + Q+ A Sbjct: 62 GKYFWEQAKQMLAKADMVIENTRRIAEEQKAVFSIGFVPSVFYGQLPSLVRDLRQQT-NA 120 Query: 127 TIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 I L + + ++A+ G++DIGF ++ +LF + V L Sbjct: 121 NILLHDLKTGEQIEALKTGKIDIGFGRLIIPDEQ----------VEQTILFQEPLLVALH 170 Query: 186 KDHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDN----VLQELGRERTIAMSLPEFEQ 240 HP L L+ + P I Q+ T + + G + + + + Sbjct: 171 VGHPLLKKGEPTLEELAKMPMILYPAGQAATPTFADICTSLFTSRGLTTKVTQQVNDLQT 230 Query: 241 SLFMAAQPDNLLLATAPRYCQYYNQ 265 +L + A + A +++ + Sbjct: 231 ALGLVAS--EMGFALVSEQVRHFGR 253 >UniRef50_B5CN01 Putative uncharacterized protein n=2 Tax=Bacteria RepID=B5CN01_9FIRM Length = 297 Score = 143 bits (361), Expect = 9e-33, Method: Composition-based stats. Identities = 56/309 (18%), Positives = 112/309 (36%), Gaps = 25/309 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L L ++R TKAA+++N+T ++S ++++L LF +S T Sbjct: 1 MNLYQLRYFLELAEKRQYTKAARQLNITQPSLSYAISQLENELGVKLFEKDGRTISLTDC 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQ-- 125 + +E + + + + + K L L + L+ + ++ P Sbjct: 61 GRDLAGCASESLAILDKGIANLKRKAAGAGKIRLGFLRTLGTDYIPDLASRYLKQNPDKE 120 Query: 126 ATIKLRN-WDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 T + L+++ GE DI FS Y + + + Sbjct: 121 TTFRFHTGSTGALLESLNAGEYDIVFSSEPPE----------SNDFHYTPVMKQDLVLIV 170 Query: 185 RKDHPALHQ-TWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 HP Q L L YP+I + D + +++G++ I E + Sbjct: 171 PDGHPLADQYRIPLSETLAYPYIYFDQSAGLRYVTDLLFEQIGQKPEIVYETDEDQVIAG 230 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 + A +A P Y L +L + L + + E Q+ ++ +R+ +P Sbjct: 231 LVAH--GFGIALVP----YMELLLRLNVRILQISYPECQR-----DIYMVTSRRHELSPA 279 Query: 304 IVWLRETIK 312 RE + Sbjct: 280 AHHFREFVL 288 >UniRef50_B1HQK1 HTH-type transcriptional regulator n=3 Tax=Bacillales RepID=B1HQK1_LYSSC Length = 297 Score = 143 bits (361), Expect = 1e-32, Method: Composition-based stats. Identities = 35/255 (13%), Positives = 87/255 (34%), Gaps = 17/255 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +D+ L + + + +KAA+R++++ ++S ++ KL PL + L T Sbjct: 1 MDIKQLQYFIAVSEHMNFSKAAERLHISQPSLSNAIKKLEHEIGSPLLDRNTRNLQLTEA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + ++ +L + + + + L + + YPQ Sbjct: 61 GEVLFERAKVIVKNMEVLKKEMDEVVVHGTSEITIGVMESIKHW-LPKVIANYKKDYPQM 119 Query: 127 TIKLRNW--DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 I L + ++ + + + + ++ + L+ + L Sbjct: 120 MIHLVDILGSKRVKKSLKSYKTHLIITNQLMD----------DPELEVKTLYEERLVAVL 169 Query: 185 RKDHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 HP +T ++ P I + N ++ G+ I + FE ++ Sbjct: 170 PLHHPLAKKETLSISDISAEPFIISTEGFQTRRDILNTFEQAGKSIDIQFEIERFETAVS 229 Query: 244 MAAQPDNLLLATAPR 258 + + NL + P Sbjct: 230 LVRE--NLGITILPE 242 >UniRef50_Q1GQE8 Transcriptional regulator, LysR family n=1 Tax=Sphingopyxis alaskensis RepID=Q1GQE8_SPHAL Length = 301 Score = 143 bits (361), Expect = 1e-32, Method: Composition-based stats. Identities = 49/290 (16%), Positives = 91/290 (31%), Gaps = 14/290 (4%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNS-PLGLSPTP 66 ++L L + +M SVT+AA+ +N++ AVSK LA+L LF+ S L+ TP Sbjct: 1 MNLRHLEAFRAVMLSGSVTQAAQSLNLSQPAVSKMLAELEHQLGFQLFLRSRGSALTVTP 60 Query: 67 LMVSMEQNLAEWMQMSNLLLDKPHHQ-TPRGLKFELAAESPLMMIMLNALSKQIYQRYPQ 125 + + L +AA L + L + + +P Sbjct: 61 EADAFFYEVERSFSGIAALKRVAEDIRNMATGTLRIAALPALAVSFLPRVIAAFRETHPG 120 Query: 126 ATIKLRNWDYDSLDA-ITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 T++L+ ++ + + DIG + I E L Sbjct: 121 VTVQLQTRSSSTVRQWMANQQFDIGLATPAREL----------PGIRMERFLRCPGACVL 170 Query: 185 RKDHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 H P IS+ E +D + ++ G R + + Sbjct: 171 PAGHRLAVKDVIRPADLEGEPFISLALEDGVRHRIDRIFEDAGVHREMVIETQYAMTICA 230 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLL 293 + Q + Y + + A + F+ P + + Sbjct: 231 LVMQGVGCSILNPVTAADYAERGLTVRDFAPEVHFEYMLFTPKLRPMSQV 280 >UniRef50_Q2NR44 Putative transcriptional regulator n=1 Tax=Sodalis glossinidius str. 'morsitans' RepID=Q2NR44_SODGM Length = 202 Score = 143 bits (361), Expect = 1e-32, Method: Composition-based stats. Identities = 43/185 (23%), Positives = 82/185 (44%), Gaps = 12/185 (6%) Query: 21 QERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSMEQNLAEWMQ 80 ++ SV AA+++NVT A+ K L K+RA F+DP+ V S L PTP +++++++ + + Sbjct: 17 EDCSVNLAARKLNVTAPAIRKLLNKIRALFNDPILVRSGTKLIPTPKAIALKEDVRQLVN 76 Query: 81 MSNLLLDKPHHQTPRGL--KFELAAESPLMMIMLNALSKQIYQRYPQATIKLRNWDYDSL 138 +L+ P F +AA + ++ + L ++ + P I L + Sbjct: 77 RIESMLNTNMTFEPHTTIVSFTIAANATIVFTLNALLFCEVQRSAPNVFINLVHDSDYDD 136 Query: 139 DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPALHQTWNLD 198 D + ++D+ + L I ++ S R HP L ++D Sbjct: 137 DFLRSNDIDLYIG----------EMCDLNPEITIRIIHSAKCYFMCRCGHPILASDKSMD 186 Query: 199 TFLRY 203 L+Y Sbjct: 187 NLLKY 191 >UniRef50_B0KG73 Transcriptional regulator, LysR family n=7 Tax=Proteobacteria RepID=B0KG73_PSEPG Length = 311 Score = 142 bits (360), Expect = 1e-32, Method: Composition-based stats. Identities = 43/286 (15%), Positives = 89/286 (31%), Gaps = 19/286 (6%) Query: 7 TLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTP 66 L + + + +M SVT AA+ + + VS+ LA+L LF L T Sbjct: 12 KLSVRHIEVFRAIMAAGSVTGAARLLFTSQPTVSRELARLEQVTGLNLFEREGGRLVATA 71 Query: 67 LMVSMEQNLAEW---MQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRY 123 + + + + ++ + + + + +L ++ +Q++ Sbjct: 72 QALLLIEEVERAYVGLERIDRFAQAIRNFE--QGRLAITCLPLFSQTLLPKACQRFHQQH 129 Query: 124 PQATIKLRNWDYDSLDA-ITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCV 182 ++ + + L+ + + D+G + + +P E+LFS Sbjct: 130 RGVSVSILAQESPLLEESLVAQQHDLGLT----------EVEQIPRGAYGELLFSANMVC 179 Query: 183 WLRKDHPA-LHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQS 241 L + HP L F I++ + LD + G R + Sbjct: 180 VLPEHHPLQAKAELELSDFHEVDFINLASLDTYRQRLDQHFRAAGVNRRTIIETTSAASV 239 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLE 287 M Q L +A LP+ L + Sbjct: 240 CAMVRQ--GLGVAIINPLSGLEAAQGGLPIRRLRVSVPYQVMLIRP 283 >UniRef50_B8K739 Transcriptional regulator, substrate-binding of LysR family protein n=1 Tax=Vibrio parahaemolyticus 16 RepID=B8K739_VIBPA Length = 297 Score = 142 bits (360), Expect = 1e-32, Method: Composition-based stats. Identities = 45/274 (16%), Positives = 87/274 (31%), Gaps = 15/274 (5%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +DL L L + + TKAA ++ + SA+S S+ KL L + +S T Sbjct: 1 MDLKRLHYFNQLAKTGNFTKAADQLGIAQSALSTSIKKLEQQLGLKLVNRTERQMSLTAE 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + ++ ++ + + A + L L +Q + YP Sbjct: 61 GQVLLRHAKIILEDVEQAEKELQELKGLTSGVIKFGAPAMLASYFLPDALEQFKKAYPGI 120 Query: 127 TIKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 I + +L + GE+D+ + I +L D + Sbjct: 121 QINIHEAGTATLAQMLVNGELDLALIRGDREHEQ----------IRQSLLAQDQIAACVP 170 Query: 186 KDHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 HP ++ LD F + P + +++ Q+ + E M Sbjct: 171 ISHPFAKRSAITLDEFCQQPLVLFKNGYFLRETVNSYCQQNKLTPQVHFETNLPELLKSM 230 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPF 278 + + P +L +P P+P Sbjct: 231 VRRQVGIG-TCLPILVADDPELKAIP-FDPPIPL 262 >UniRef50_UPI0000E0F9F3 Transcriptional Regulator, LysR family protein n=1 Tax=Rhodobacterales bacterium HTCC2255 RepID=UPI0000E0F9F3 Length = 294 Score = 142 bits (360), Expect = 1e-32, Method: Composition-based stats. Identities = 48/279 (17%), Positives = 98/279 (35%), Gaps = 29/279 (10%) Query: 7 TLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPT- 65 +L L ++ Q + +AA +++VT A+S ++ K LF + ++ T Sbjct: 2 SLSFKQLQAFLMMAQSHNFAEAAIKMHVTQPALSSAIKKCEDILGGELFTRTTRTVALTK 61 Query: 66 ------PLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQI 119 P+ + + M + + +AA L Q Sbjct: 62 EGEAFLPIAQRLHTEYQDAMAQIQAV------FAKQTGTLSVAAMPSFAERYLPEYLYQF 115 Query: 120 YQRYPQATIKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSD 178 + YP +IK+ + + +D + G+V+ GF+ H L I + LF+D Sbjct: 116 HILYPNISIKIEDVVVEKVIDLVQEGKVECGFTFEPKHN----------LDITFTPLFTD 165 Query: 179 VPCVWLRKDHPALH---QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSL 235 V + HP +T L + + + + +D+V +E + I Sbjct: 166 QFVVVMHASHPLNQPKHRTLTLHDIATFDMVVMNRNSNLRVFIDSVYEEQEITQHIIAEA 225 Query: 236 PEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVAL 274 + + + + +A P+ + L +AL Sbjct: 226 SQIGTLGQLVKR--QIGIAIVPQLSSQRMEELGLVCIAL 262 >UniRef50_C6W9R3 Transcriptional regulator, LysR family n=1 Tax=Actinosynnema mirum DSM 43827 RepID=C6W9R3_ACTMD Length = 299 Score = 142 bits (360), Expect = 1e-32, Method: Composition-based stats. Identities = 38/241 (15%), Positives = 75/241 (31%), Gaps = 14/241 (5%) Query: 12 LLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSM 71 L + + S T+ A+R V SAVS ++ +L LF +S T ++ Sbjct: 8 QLAYFLAVAETGSFTRGARRAGVVQSAVSAAVTQLERELGAELFERHYHRVSLTAEGEAL 67 Query: 72 EQNLAEWMQMSNLLLDKPHHQT-PRGLKFELAAESPLMMIMLNALSKQIYQRYPQATIKL 130 + + + + L S + L L + R+P+ + L Sbjct: 68 LPRARDVLTALDAAREAVAGARGELVGTVRLGTISFTGPLDLAGLLRSFAARHPRVEVHL 127 Query: 131 RNWDY---DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKD 187 R SLD + G +D+ + + + + + +D Sbjct: 128 RQTTSGTATSLDDLRSGALDLALVSTPADGL---------PGVALTEIHREPLVLVCGRD 178 Query: 188 HPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAA 246 HP + + P I + +D+ G R I + +F + + Sbjct: 179 HPLASAERVGIGQLAGEPFIDFPTGWGNRAVIDHAFASAGVTRAIRTEVTDFALARTLVE 238 Query: 247 Q 247 Sbjct: 239 H 239 >UniRef50_Q2GAY9 Transcriptional regulator, LysR family n=1 Tax=Novosphingobium aromaticivorans DSM 12444 RepID=Q2GAY9_NOVAD Length = 308 Score = 142 bits (360), Expect = 1e-32, Method: Composition-based stats. Identities = 48/254 (18%), Positives = 94/254 (37%), Gaps = 16/254 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +DL L + RS ++AA+ +N+ +S+++ L LF + L+ TPL Sbjct: 1 MDLRQLRQFLAVANARSFSRAAETLNIAQPPLSRTIRHLEEEIGGALFDRTARPLAMTPL 60 Query: 68 MVSMEQNLAEWMQMSNLLLD-KPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + + + + D +F + + + L L + +R P Sbjct: 61 GQLLHEQARQILDRMGDMHDMMKAAAATERRRFTIGFVASTIYARLPELIRAFRKRAPDV 120 Query: 127 TIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + L + L A+ G +D+GF + AI +L ++ V L Sbjct: 121 ELTLVESSTLEQLAALKDGRIDVGFGR----------IRFEDPAIKRIILRNERLAVALP 170 Query: 186 KDHPAL--HQTWNLDTFLRYPHISI--CWEQSDTWALDNVLQELGRERTIAMSLPEFEQS 241 +DHP + L P I S + ++ ++ G E IA E + + Sbjct: 171 RDHPLALDDRPLTLKQVAAEPQILYPRAPRPSYADQVISLFRDHGLEPRIAHEARELQIA 230 Query: 242 LFMAAQPDNLLLAT 255 + + A + L + Sbjct: 231 IGLVAAEEGLAIIP 244 >UniRef50_B0TCS4 Transcriptional regulator, lysr family n=2 Tax=Firmicutes RepID=B0TCS4_HELMI Length = 310 Score = 142 bits (359), Expect = 1e-32, Method: Composition-based stats. Identities = 56/273 (20%), Positives = 102/273 (37%), Gaps = 15/273 (5%) Query: 12 LLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSM 71 L L+ +E S++KAA+++ +T AVS+S+ +L LF +P G+ T + Sbjct: 7 LYRAFYLVAREGSISKAAEQLYITQPAVSRSIQQLEEKLGCVLFFRTPKGVKLTKEGELL 66 Query: 72 EQNLAEWMQMS---NLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQATI 128 + + L + + +AA + L K+ + YP I Sbjct: 67 FPYIEQAFNFIAVGEKTLAQITALE--NGEITIAAGDTICKNYLPPHLKRFKEAYPGIRI 124 Query: 129 KLRNWD-YDSLDAITRGEVDIGFSGRE-SHPRSRELLSSLPLAIDYEVLFSDVPCVWLRK 186 + N + ++ + +G+VDIGF + S L S+ + + F V K Sbjct: 125 HVTNENTPSTIRLLKKGKVDIGFVHAPVVNDPSATALLSIHEVLQIQDCF-----VVGEK 179 Query: 187 DHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAA 246 + +L+ RYP I + S ++N + E L +FE + A Sbjct: 180 YKELAARPRSLEELARYPLILLEKGSSSRIYIENFFAQHNIELKPEFELSDFELLIRF-A 238 Query: 247 QPDNLLLATAPRY-CQYYNQLHQLPLVAL-PLP 277 Q D + + + L P+P Sbjct: 239 QIDFGAACVIKNFVADELARGSLYEIQPLTPIP 271 >UniRef50_A8TZA8 Transcriptional regulator, LysR family protein n=1 Tax=alpha proteobacterium BAL199 RepID=A8TZA8_9PROT Length = 308 Score = 142 bits (359), Expect = 2e-32, Method: Composition-based stats. Identities = 55/313 (17%), Positives = 107/313 (34%), Gaps = 20/313 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +DL L Q +++ S ++AA+ + ++ AVS+ +A L A PLF+ S G++PT Sbjct: 1 MDLRALRYFQAVVEFGSYSRAAESLRISQPAVSRQVAHLEAELGRPLFMRSGHGVTPTEA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + ++ + + LA ++ L ++ P A Sbjct: 61 GRLLFERSQAILRQVENVTSEIQGADTDLAGTLTLAVPPGAGHFLMPELVRRFRADCPGA 120 Query: 127 TIKLRN-WDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 +K+ + + + RG VD+ R E++ + +V V Sbjct: 121 FLKVVAGYSGYIHEWLIRGRVDVACLHGALPQRGFEVIPLVD---------EEVFLVGQP 171 Query: 186 KDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMA 245 P P I S LD L LG ++M + + + Sbjct: 172 NAAPFSRGYAQARDLSELPLILPGRPNSSRRLLDETLSTLGITPFVSMEIDDTSMVRSLL 231 Query: 246 AQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIV 305 Q L + + +Y + L A+P + P ++ +P + Sbjct: 232 KQGLGYSLLSQGAFVEYVARG---ELSAVPF------RPGAYWPLAMMLSTTRQRSPLVD 282 Query: 306 WLRETIKNLYASM 318 L TI+ + Sbjct: 283 LLIATIRATVGDL 295 >UniRef50_A4ISN4 Transcriptional regulator LysR family n=6 Tax=Geobacillus RepID=A4ISN4_GEOTN Length = 305 Score = 142 bits (358), Expect = 2e-32, Method: Composition-based stats. Identities = 38/271 (14%), Positives = 91/271 (33%), Gaps = 19/271 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +D+ L + +E +TKAA+++++ +S+ L +L PLF + T Sbjct: 2 IDVKQLKYFVTIAEEGQITKAAQKLHIAQPPLSQQLKQLEEKLGVPLFDRKAKKMELTAP 61 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTP-RGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + + + + + + + + +Q ++++P Sbjct: 62 GKLFYEKAKQLLHQLDDAIAEVKEIETGATGTLAVGCVKSCFSYLAQTI-RQFHEQFPNV 120 Query: 127 TIKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 T LR D S+ + +DIG +++ L SD L Sbjct: 121 TFHLREGDTFSICQLLQERHIDIGIVRLPIDSSHYDIIP----------LPSDRYVAVLP 170 Query: 186 KDHPALHQTWNLDTFLRYPHIS---ICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 + + ++ F +P + + ++ + G E + P+ L Sbjct: 171 EHWALSRSSLSMRDFAEWPLLLLHRVHGAGQYERVVEE-CRRHGFEPNVLCECPDATILL 229 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVA 273 + AQ + P+ +L + ++ Sbjct: 230 SLVAQ--GMGATIVPQSTVSLFRLPGIRVLP 258 >UniRef50_Q12AP3 Transcriptional regulator, LysR family n=4 Tax=Burkholderiales RepID=Q12AP3_POLSJ Length = 303 Score = 142 bits (358), Expect = 2e-32, Method: Composition-based stats. Identities = 39/277 (14%), Positives = 90/277 (32%), Gaps = 19/277 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L L + + T+AA+R+++T S +S + +L + LF + T Sbjct: 1 MELRHLRYFVALAECLNFTRAAERVHITQSTLSHQIRQLEEEIGELLFERVGKRVLITER 60 Query: 68 MVSMEQNLAEWMQMSNLLLDK-PHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 A+ ++ + + K + + + + R+P Sbjct: 61 GELFLSYAAKALKEVDQGVAALKESARGLTGKLRIGSTHTFNQGFIPECIATLLVRHPTV 120 Query: 127 TIKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + + D + + + G +D+G S R + +E L+++ + + Sbjct: 121 KVAASEFTADDIGERLASGALDLGISYRPRTVG----------DLWFEPLYNEQMVLVVS 170 Query: 186 KDHPALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 HP + L R P + + + LD + E + + + L + Sbjct: 171 PQHPLAGRKRIRLVELHRQPLVLLPEAFATRAMLDECFRACDAEPLVVVEMNTLAPMLAL 230 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDES 281 + + + L A+PL Sbjct: 231 VERTQIGAIV------SENAVRDRSTLRAVPLESPTP 261 >UniRef50_A9WIA6 LysR substrate-binding n=4 Tax=Chloroflexaceae RepID=A9WIA6_CHLAA Length = 307 Score = 142 bits (358), Expect = 2e-32, Method: Composition-based stats. Identities = 55/307 (17%), Positives = 104/307 (33%), Gaps = 21/307 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 L+L+LL ++++ S TKAA+ + ++ SAVS+++ +L L G++PT Sbjct: 17 LNLHLLRIYVAVLEQGSFTKAAEVLTMSQSAVSRAVQELERQLGTTLLERRARGVAPTMA 76 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRGL-KFELAAESPLMMIMLNALSKQIYQRYPQA 126 + ++ L ++ + + + A S + + +L L ++RYP Sbjct: 77 GTILGEHARRIFTHERLAIEALNELRGLQRGRLAIGASSTIGIYLLPPLLGNYHRRYPGI 136 Query: 127 TIKL-RNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + L ++ + ++D+ E + + SD V Sbjct: 137 ELFLDIGNTQQIIERLLSYQIDVA---------YVEGPVAANEDLQVVPWRSDEMVVIAS 187 Query: 186 KDHPALHQTWNLD--TFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 DHP + LD P I ++ L M L E Sbjct: 188 PDHPL-TRRVTLDCSDLQDAPFIMREPGSGTRKVMEQALAAHNVTVRPVMELGSTEAVKQ 246 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 L L+ R+ ++L L L +P Q++ V H R Sbjct: 247 AV--SAGLGLSMVSRFTIQ-SELIAGKLRVLNIPGLNIQRQLSRVRL----HDRPQSLAL 299 Query: 304 IVWLRET 310 W + Sbjct: 300 EAWFKNR 306 >UniRef50_UPI00016C47B2 transcriptional regulator, LysR family protein n=1 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C47B2 Length = 291 Score = 142 bits (358), Expect = 2e-32, Method: Composition-based stats. Identities = 46/308 (14%), Positives = 93/308 (30%), Gaps = 25/308 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLR---AWFDDPLFVNSPLGLSP 64 ++L+ L + + S T+AA+R +VT +S+ + +L LF + Sbjct: 1 MELHQLRYFVAVAETGSFTRAAEREDVTQPTLSEQIMRLESKPHGVGRRLFDRLGRKVVL 60 Query: 65 TPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYP 124 T + + + + G + A + +L + + +P Sbjct: 61 TDAGRELLGHAQGILAAVKEAERAVRD-SAEGGSLRVGAIPTIAPFLLPGTVTRFRKDHP 119 Query: 125 QATIKL-RNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVW 183 ++L + L + GE+D+ + + E LF++ + Sbjct: 120 NVQLQLKEDLTERLLADLLAGELDVAL----------MAMPVRDDRLHVEKLFAEPLVMA 169 Query: 184 LRKDHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 L H L L P I + + ++ G E + + L Sbjct: 170 LPAKHELASKTEVKLADVLEEPFILLDDMHCFGDQVLSLCHRGGLEPRVVCRGEQIVTLL 229 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 M A ++ P + Q L P +WHK+ P Sbjct: 230 AMVAA--GQGVSIVPEMAATADTSKQCAYRPLGKPTPVR-------TLCAVWHKQRFRPP 280 Query: 303 KIVWLRET 310 + L + Sbjct: 281 SLRALVDM 288 >UniRef50_C4Z2A4 LysR family transcriptional regulator, transcription activator of glutamate synthase operon n=1 Tax=Eubacterium eligens ATCC 27750 RepID=C4Z2A4_EUBE2 Length = 299 Score = 142 bits (358), Expect = 2e-32, Method: Composition-based stats. Identities = 40/307 (13%), Positives = 93/307 (30%), Gaps = 27/307 (8%) Query: 13 LLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSME 72 L L + R TKAA+ + +T ++S +++++ LF + ++ T Sbjct: 6 LRYFVTLARIRQYTKAAEELCITQPSLSHAISQMEKELGVKLFEKNGHKITLTQFGEEFL 65 Query: 73 QNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQATIKL-- 130 + + + + + L PL + + ++ ++ P+ I Sbjct: 66 SYAEKTLDVLDDGIASIKRSAMGNGTIRLGLVRPLGISYVPRMAAAFIKKNPKLDIDFTF 125 Query: 131 -RNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHP 189 + LD + G+ D+ F + S E + + K HP Sbjct: 126 HTDVTGRLLDDMQLGKYDLLFCSKPSEEY----------HFTAEPVMKQRLVLITPKGHP 175 Query: 190 ALHQT---WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAA 246 + NL Y ++ D +L+ +A E + + A Sbjct: 176 LAKKRKRSINLAETAGYSYVCFDKNSGIRSIFDEMLKRSDITVKVAYETEEDQVIAGLVA 235 Query: 247 QPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVW 306 + + + + + E + + E F ++ +P + Sbjct: 236 SGFGIAVVPYMDILEKMS-----------VEIFEIESPEYERSFYMVNDNSTYMSPAVET 284 Query: 307 LRETIKN 313 R + Sbjct: 285 FRNFVIE 291 >UniRef50_B9QYV9 LysR substrate binding domain protein n=1 Tax=Labrenzia alexandrii DFL-11 RepID=B9QYV9_9RHOB Length = 303 Score = 141 bits (357), Expect = 3e-32, Method: Composition-based stats. Identities = 48/287 (16%), Positives = 91/287 (31%), Gaps = 21/287 (7%) Query: 7 TLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTP 66 D L +M+ S AA++++++ SAV++ + KL LF + + PT Sbjct: 4 NFDFGDLEAFLAVMETASFHLAAEQLHLSQSAVTRRIQKLEQVLGSKLFERTTRAVKPTL 63 Query: 67 LMVSMEQNLAEWMQMSNLLLDKPHH----QTPRGL-KFELAAESPL-MMIMLNALSKQIY 120 ++ E + + + +A L + L L + Sbjct: 64 AAKRLQSRAEEMLDNAEETTLAMRDESVAFAHQKGAVVTIAMIPTLIAPLFLPGL-SSMR 122 Query: 121 QRYPQATIKLRNWD-YDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 Q A I+L + D +A++ GE D G + SL +E F D Sbjct: 123 QADETARIRLMDLSANDVAEAVSSGEADFGICS----------IGSLEANTHFEPWFDDE 172 Query: 180 PCVWLRKDH-PALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEF 238 + + +H A + L I + +D+ + + + Sbjct: 173 IVLAIPIEHQLAAQDNVSWPDLLNEDLILPARGTGNRLLIDDAMAKGRISAQWTYEVGRS 232 Query: 239 EQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKK 285 ++ M + + +A PR L LP P Sbjct: 233 TTAMEMVSG--GVGIALLPRSAATSTFAQGLRFKKLPKPVVTRPIGL 277 >UniRef50_C2BX95 Transcriptional regulator n=1 Tax=Listeria grayi DSM 20601 RepID=C2BX95_LISGR Length = 297 Score = 141 bits (357), Expect = 3e-32, Method: Composition-based stats. Identities = 38/258 (14%), Positives = 76/258 (29%), Gaps = 18/258 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L + +T+A++ ++V SAVS+ + KL LF + T + Sbjct: 1 MELRQLKYFMEVASFEHMTQASENLHVAQSAVSRQITKLEEELGIKLFDRVGRNMQLTTV 60 Query: 68 MVSMEQNLAEWMQMS---NLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYP 124 + ++ + P + + L +L A+ YP Sbjct: 61 GEDFLNQVKVAYNELLKAEAIVTEYS--DPTKGSVRIGLPNSLASKVLPAVISAFRAEYP 118 Query: 125 QATIKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVW 183 T L + GE+DI F + +++ F + V Sbjct: 119 DVTYHFVEGSNAELKQLLLDGEIDITF---------LSPVPVTDDSVEAVKFFDEKLKVI 169 Query: 184 LRKDHPALHQ-TWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 HP + +L+ I + ++ IA +F Sbjct: 170 FPATHPLADRYNVSLEELAAEKFILYPPNFDLFKIVTTAAEKKAISLDIAFQSQDFYTIQ 229 Query: 243 FMAAQPDNLLLATAPRYC 260 + L ++ P Sbjct: 230 GLVGA--GLGISILPEMI 245 >UniRef50_Q4ZRN4 Regulatory protein, LysR:LysR, substrate-binding n=15 Tax=Proteobacteria RepID=Q4ZRN4_PSEU2 Length = 325 Score = 141 bits (357), Expect = 3e-32, Method: Composition-based stats. Identities = 49/275 (17%), Positives = 93/275 (33%), Gaps = 15/275 (5%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 + L+LN L L++ S + AA+R+++T AVS + +L L L P Sbjct: 30 MRRLNLNHLHTFSLVIAHGSFSAAAERLHLTQPAVSLHVRQLEDQLKLQLIERVGKRLKP 89 Query: 65 TPLMVSMEQNLAEWMQMSNLLLDK-PHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRY 123 T + +++A + L H + K + + + +L + + + +R+ Sbjct: 90 TSAGTVLLEHIARIDAVVEDALQALSSHASGVAGKIAIGTGATACIHLLPPMLQALRRRF 149 Query: 124 PQATIKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCV 182 P+ +++ + + L A+ +D+ + RS + L D Sbjct: 150 PELDVRVSTGNTEGILKAVEENLLDLALVTLPAASRS----------LHITPLLEDAFVA 199 Query: 183 WLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 + + P + S +D G M L E Sbjct: 200 IFASSQRPMPAHMTPERLSAQPLVVFEAGSSTRLLIDEWFLHAGIRVKPVMELGSIEAIK 259 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLP 277 M A +L + PR H+ L LPL Sbjct: 260 EMVAA--DLGYSIVPRMA-VAALHHRRGLQMLPLA 291 >UniRef50_B0TNB6 Transcriptional regulator, LysR family n=19 Tax=Shewanella RepID=B0TNB6_SHEHH Length = 303 Score = 141 bits (356), Expect = 3e-32, Method: Composition-based stats. Identities = 49/303 (16%), Positives = 92/303 (30%), Gaps = 24/303 (7%) Query: 3 KSITTLD-----LNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVN 57 + +D + L L L+ S TKAA+R+N+ A+S+S+ +L L Sbjct: 1 MQLRKIDRVDMDIRQLKYLDALITAGSFTKAAERLNMAQPALSQSIKRLEQELGVTLVDR 60 Query: 58 SPLG----LSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIML 112 LS T ++ Q+ ++ + +A L L Sbjct: 61 GANKSSKTLSLTAEGSALHQHAKLIIKNMAQAEAHIKSMANLTMGEVRVAVPGMLGSFYL 120 Query: 113 NALSKQIYQRYPQATIK-LRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAID 171 R+P+ + D+L + +VDI + L D Sbjct: 121 PRRLMAFRHRHPELKLSLFEGGTRDTLKMLQNEDVDIAIITA----------NDLTDEFD 170 Query: 172 YEVLFSDVPCVWLRKDHPALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERT 230 +L + V + ++HP L+ F ++ + + ++LG Sbjct: 171 SHLLLQEQMVVAVGREHPLAKSDAVTLEEFFQHELVFFKPGYFHREWMLEQAEQLGLTAN 230 Query: 231 IAMSLPEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPF 290 IA + AQ + T + P+ D K + P Sbjct: 231 IAFETNLINLIKQVVAQ--EYGITTVLEMVIEKHDNICAKPFIPPIFLDLHIAWKKQRPI 288 Query: 291 TLL 293 + Sbjct: 289 SQA 291 >UniRef50_P39592 Uncharacterized HTH-type transcriptional regulator ywbI n=9 Tax=Bacillales RepID=YWBI_BACSU Length = 301 Score = 141 bits (356), Expect = 3e-32, Method: Composition-based stats. Identities = 43/304 (14%), Positives = 90/304 (29%), Gaps = 23/304 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +D+ L + + +S TKA++ + V+ +SK + L LF + + T Sbjct: 1 MDIRHLTYFLEVARLKSFTKASQSLYVSQPTISKMIKNLEEELGIELFYRNGRQVELTDA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQ-TPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 SM E ++ L + + + + + + + YP Sbjct: 61 GHSMYVQAQEIIKSFQNLTSELNDIMEVKKGHVRIGLPPMIGSGFFPRVLGDFRENYPNV 120 Query: 127 TIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 T +L + + G +DIG +L + + + + + Sbjct: 121 TFQLVEDGSIKVQEGVGDGSLDIGV----------VVLPANEDIFHSFTIVKETLMLVVH 170 Query: 186 KDHPALHQ-TWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 H + L P I + + + G I +++ M Sbjct: 171 PSHRLADEKECQLRELKDEPFIFFREDFVLHNRIMTECIKAGFRPHIIYETSQWDFISEM 230 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHK-RNSHNPK 303 NL + P ++ ++ L P + ++W K R Sbjct: 231 V--SANLGIGLLPERICRGLDPEKVKVIPLVDPV-------IPWHLAIIWRKDRYLSFAA 281 Query: 304 IVWL 307 WL Sbjct: 282 RAWL 285 >UniRef50_B7RZY7 LysR substrate binding domain protein n=1 Tax=marine gamma proteobacterium HTCC2148 RepID=B7RZY7_9GAMM Length = 318 Score = 140 bits (355), Expect = 5e-32, Method: Composition-based stats. Identities = 46/318 (14%), Positives = 101/318 (31%), Gaps = 22/318 (6%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 + + L L L Q +S +A++ ++++ A+S ++ + LF S L Sbjct: 20 LMNVSLRQLRAFVTLAQSQSFAEASELLHLSQPALSVAIKNMEQETGGSLFSRSTRSLQL 79 Query: 65 TPLMVSMEQNLAEWMQMSNLLLDK-PHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRY 123 +P + + D + K +A M + Y Sbjct: 80 SPEGRQFLPVARRLLADWDQAFDDLGRAFNLQQGKIRVAVMPSFAMNQFPEALAPFQREY 139 Query: 124 PQATIKLRNWDYDS-LDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCV 182 P I + + +S +DA+ G+V++G + +++ LF+D Sbjct: 140 PDINISVEDVVMESVIDAVREGQVELGITFEPDQM----------DGLEFTPLFTDRWIA 189 Query: 183 WLRKDHPA-LHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQS 241 + P + + + P I++ + L E G T + + Sbjct: 190 LVHPKSPLAARKKLSWTALMEEPFIAMNRGSWSRNTTEKALSEAGVTPTRLLEANQLATI 249 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 M L A P+ C+ + + + +E + KR S + Sbjct: 250 GRMV--SVGLGTAVVPQLCRQQMESLGILCK-------TIGRPSIERQVGIFTRKRRSLS 300 Query: 302 PKIVWLRETIKNLYASMA 319 L + ++ ++ Sbjct: 301 GAAQALIAHLLEHFSKVS 318 >UniRef50_Q7N4W1 Hca operon transcriptional activator n=2 Tax=Photorhabdus RepID=Q7N4W1_PHOLL Length = 294 Score = 140 bits (355), Expect = 5e-32, Method: Composition-based stats. Identities = 44/295 (14%), Positives = 98/295 (33%), Gaps = 24/295 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L + +E + TKAAK+++ ++S+ + L + L + +S T Sbjct: 1 MELRHLRYFIAVAEELNFTKAAKKLHTAQPSLSQQIKDLEDYIGSTLLERNKRRVSLTKA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQAT 127 Q ++ + + + + +L + +P A Sbjct: 61 GEVFLQQARLILENAEKAKKMARRAAQEQIVLTIGFVPSAEVKVLPEVIPIFRLAHPGAK 120 Query: 128 IKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRK 186 ++L + + + + +G++D+ F +ID++V+ ++ V + Sbjct: 121 VELISLFNPGQEEKLLQGDIDVAFMRPPIK----------SDSIDFKVILNEPLVVLMPA 170 Query: 187 DHPAL-HQTWNLDTFLRYPHISICWEQSD--TWALDNVLQELGRERTIAMSLPEFEQSLF 243 +H + +++ I+ QS ++N E I + L Sbjct: 171 NHRLRYCEKISVNDLQGENFITPDPTQSGVLQQIIENYFTEHNVVPNIIQTANNMLLILN 230 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRN 298 M NL A P Y ++ PL + + W K N Sbjct: 231 MV--SLNLGCAIVPFYITSIMTD---AVICRPL-----SGYSPTIELIMAWRKDN 275 >UniRef50_A8G141 Transcriptional regulator, LysR family n=9 Tax=Shewanella RepID=A8G141_SHESH Length = 335 Score = 140 bits (355), Expect = 5e-32, Method: Composition-based stats. Identities = 47/279 (16%), Positives = 97/279 (34%), Gaps = 14/279 (5%) Query: 1 MKKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPL 60 M K I L+ N L + + +AA + +T S VS++L LR F D LF+ Sbjct: 13 MNK-IDQLNYNQLKVFIAIYEHGQSHQAANELGMTASGVSRTLKILRDIFKDSLFIRRTS 71 Query: 61 GLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQ 118 G T + + + + TP ++ + A + + + Sbjct: 72 GFIATEKTHQLIPMAKALVAQYQKIEMQHSVFTPAESGGQYTIHAYDEFVYAVQKVIRND 131 Query: 119 IYQRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSD 178 I P +R +D + G++D + ++ +D Sbjct: 132 ILLEAPNLRFDVRVLTHDCSTELANGDMDFVVVYEGFNGKNLNYEMFAE---------TD 182 Query: 179 VPCVWLRKDHPALHQTWNLDTFLRYPHISIC-WEQSDTWALDNVLQELGRER-TIAMSLP 236 + + +HP L Q L+ Y + I ++ L N+ +E G + Sbjct: 183 SLYLLVNNEHPILTQELTLENISNYSCLEIDNYDDLSCPLLVNLCREKGLSPMEVEGYTD 242 Query: 237 EFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALP 275 ++ + ++ D + L+ Q+ + ++ + LP Sbjct: 243 SLASAIRLLSESDAITLSCNQFTRQFVKMIPKIQCLKLP 281 >UniRef50_C8WRL7 Transcriptional regulator, LysR family n=2 Tax=Alicyclobacillus acidocaldarius RepID=C8WRL7_ALIAD Length = 303 Score = 140 bits (354), Expect = 6e-32, Method: Composition-based stats. Identities = 52/309 (16%), Positives = 100/309 (32%), Gaps = 20/309 (6%) Query: 13 LLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSME 72 L L ++ SV++AA+ ++VT V++ + +L F LF S L+ TP + Sbjct: 5 LRALVTVVSLGSVSEAARALHVTQPTVTRQIQQLERHFGQALFDRSGKRLALTPAGERVH 64 Query: 73 QNLAEWMQMSNLLLDKPHH-QTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQATIKLR 131 E ++ L + P + A + L A+ + +P+ ++ Sbjct: 65 AYALEVLRKQEELAESLLEMSNPEAGLVRMGAGLSPTLYRLPAMVARYASMHPRVRFQVV 124 Query: 132 NWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPA 190 +L+ + VD+ ++ L+ D H Sbjct: 125 TGSSKVTLERLASRVVDLAIVTTPPEDE---------AGVEQVALWRDELVAVAPSYHAL 175 Query: 191 LHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRER--TIAMSLPEFEQSLFMAAQP 248 + + +YP + + E +D++L G ER M E Sbjct: 176 AGKRATIVELAQYPLVVMHGESGLRRQIDDLLHRAGVERPAPPVMETDSLEAMNRFVQAG 235 Query: 249 DNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWLR 308 L + P Q +L LV + TL+W K + Sbjct: 236 LGLAVVPWPAVADDVTQ-GRLKLVH------IVGCDLGQRTVTLVWRKESHIPAAARAFI 288 Query: 309 ETIKNLYAS 317 E + ++ A+ Sbjct: 289 EWLASVGAA 297 >UniRef50_C0VZJ2 Oxidative stress transcriptional regulator n=1 Tax=Actinomyces coleocanis DSM 15436 RepID=C0VZJ2_9ACTO Length = 301 Score = 140 bits (354), Expect = 6e-32, Method: Composition-based stats. Identities = 45/280 (16%), Positives = 91/280 (32%), Gaps = 19/280 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +++ L +L+ ERS TKAA R V+ +S + KL L + G+ TP+ Sbjct: 1 MNIRDLRYFTVLVDERSFTKAAARCGVSQPTLSTQIRKLEEKIGATLVERASQGIIITPV 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQ-TPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + + + + + P F L L +L + +I + P Sbjct: 61 GQEILEYARSIIDKAEAIQNYADRAKDPHSGTFTLGMFPTLGPYLLPHIMHRIQKELPNI 120 Query: 127 TIKLRNWDYDSL-DAITRGEVD-IGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 T++L + L + ++RGE+D I R + + LF + Sbjct: 121 TVRLVEEKSEILSEMLSRGELDGIVLGEEPHDER-----------LIVKHLFDEEFVFAS 169 Query: 185 RKDHPALH--QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 DHP + + ++ + + + + + F Sbjct: 170 TADHPLANLDRPLTVEDLNGTELLLLTEGHCLRQQSLEICHTAQAK-QVDFRASSFPALR 228 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQ 282 +M A + + PR+ ++ L Sbjct: 229 YMVAS--GIGASLFPRFSVIPPIMNPETLKITEFAQPRPS 266 >UniRef50_A9WDF5 LysR substrate-binding n=3 Tax=Chloroflexus RepID=A9WDF5_CHLAA Length = 298 Score = 140 bits (354), Expect = 7e-32, Method: Composition-based stats. Identities = 53/275 (19%), Positives = 90/275 (32%), Gaps = 18/275 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 LDL L ++ S++KAA+++++T S VS+ + L LFV G+ TP Sbjct: 2 LDLYKLDIFTRVVAAGSLSKAAEQLHMTQSGVSQHIRALEDSLGTELFVRGRRGVELTPA 61 Query: 68 MVSMEQNLAEWMQMS-NLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + ++ L R + + + +L + QRYP Sbjct: 62 GQRLLAYCEGIFRLVAEAELAVTDVAGLRDGQLTIGVTPGVSAYLLPEWVQMFRQRYPNL 121 Query: 127 TIKLRN-WDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFS-DVPCVWL 184 + + ++ + G +D+G L S + + L D V Sbjct: 122 AVSAQTGTTPSIVNELRNGSLDLG--------AIEGELDSAERDLQQQALREFDQYVVVG 173 Query: 185 RKDHPALHQ-TWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 R+ HP + +L P + LD+ L+E I L E Sbjct: 174 RR-HPWWGRSEVHLQELAGQPMVMRQSSSQTRVWLDHALREQSLTPRIIAELDNLESIKR 232 Query: 244 MAA-QPDNLLLATAPRYCQYYNQLHQLPLVALPLP 277 M L P Y Q L +P+ Sbjct: 233 MVMIGT---GLTILPLYAVTAEQEVG-ALHPIPIA 263 >UniRef50_Q2J7C4 Transcriptional regulator, LysR family n=22 Tax=Actinomycetales RepID=Q2J7C4_FRASC Length = 316 Score = 140 bits (354), Expect = 7e-32, Method: Composition-based stats. Identities = 49/274 (17%), Positives = 88/274 (32%), Gaps = 19/274 (6%) Query: 10 LNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMV 69 L+ L + + R T+AA+R++V ++S+ + L PLF + +S TP Sbjct: 3 LHQLAYFVAVAETRHFTRAAQRVHVAQPSLSQQIRALEQELGTPLFNRARGNISLTPAGE 62 Query: 70 SMEQNLAEWMQMSNLLLDKPHH-QTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQATI 128 ++ + + + R L A L L + + +QRYP + Sbjct: 63 TLLPLARRILTDTETARQRVTELLDLRHGTVRLGATPSLCTGFLPDVLRLFHQRYPGIRL 122 Query: 129 KLRN-WDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKD 187 + D + + G +D+ L S A+ L + + D Sbjct: 123 LVEEGGSRDLVRDLAAGSLDLALIILP--------LQSSDPALATSPLIRESLVLVSSLD 174 Query: 188 HP--ALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMA 245 P + + +P + A +E G E A+ E + L Sbjct: 175 EPPIVAGRPLTVADLRNHPMVMFRRGYDLREATVTACREAGFEPIFAIEGGEMDAVLGFV 234 Query: 246 AQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFD 279 A L A P H+L + P Sbjct: 235 AA--GLGSAVIPSTVA-----HRLGMRVTPFVLP 261 >UniRef50_D2D3B5 FumC n=1 Tax=Sphingopyxis macrogoltabida RepID=D2D3B5_9SPHN Length = 314 Score = 140 bits (354), Expect = 7e-32, Method: Composition-based stats. Identities = 45/277 (16%), Positives = 96/277 (34%), Gaps = 25/277 (9%) Query: 13 LLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSME 72 L + + RS + AA+ +N + A+S+ + +L + PLF + L+ T L + Sbjct: 12 LRSFVAVYETRSFSHAARLLNQSQPALSRRIQRLESLVGGPLFERTSRSLAETALGKELL 71 Query: 73 QNLAEWMQMSNLLLDKPHHQTPRGLKFE-----LAAESPLMMIMLNALSKQIYQRYPQAT 127 +++ + L P +F +A +L ++ + P+ Sbjct: 72 PVAHRALELVDTSLFAS----PNVREFRWTDITIACVQTAAFHVLPRAARLYMDQNPRVR 127 Query: 128 IKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRK 186 +++ + ++ D + GE + G S S LP ++ ++ L D + + Sbjct: 128 LRILDVPAVEAADLVASGEAEFGISIE----------SLLPSSLRFDALHEDPFGLACHR 177 Query: 187 DHPALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMA 245 HP + I++ + LD L + +L + Sbjct: 178 SHPLASLEILEWTQLKGESLIAVHRASRNRTLLDAELARNNIALEWRYEVAHLTTALGLI 237 Query: 246 AQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQ 282 L +A PR + + +V P+ Q Sbjct: 238 DA--QLGVAVMPRMV--MPRSGRSEVVWRPVVAPVVQ 270 >UniRef50_A1TN88 Transcriptional regulator, LysR family n=9 Tax=Burkholderiales RepID=A1TN88_ACIAC Length = 307 Score = 140 bits (354), Expect = 7e-32, Method: Composition-based stats. Identities = 37/260 (14%), Positives = 91/260 (35%), Gaps = 17/260 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L +L E +AA R+N++ +S ++ +L LF +P + TP Sbjct: 1 MELRHLRYFAVLADELHFGRAAARLNMSQPPLSVAIRQLEERVGAQLFERTPKEVRLTPA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTP-RGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 +++ + + + L + + + ++ L QR+P Sbjct: 61 GRALKASARRVLAQAEEALSEARGVAAGLAGRLRIGFVGAMLYRGLPQALGVFQQRHPGV 120 Query: 127 TIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + L+ + + + + +D+GF S +P + +L ++ L Sbjct: 121 RVSLQELNSGEQIGELLHDRLDLGF----------VHTSRMPATLQQRLLVTEPFLCCLP 170 Query: 186 KDHPALHQT-WNLDTFLRYPHISICW--EQSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 H + +L P + + ++ G + I + + + Sbjct: 171 AGHRLARRKVIDLRDLAGEPFVLFARAVSPDYHARILSICASAGFQPEIGHEVRHWLAVV 230 Query: 243 FMAAQPDNLLLATAPRYCQY 262 + +Q L +A P+ ++ Sbjct: 231 SLVSQ--GLGVALVPQAMEH 248 >UniRef50_Q65GU9 Transcriptional regulator YbbE n=2 Tax=Bacillus subtilis group RepID=Q65GU9_BACLD Length = 299 Score = 140 bits (353), Expect = 8e-32, Method: Composition-based stats. Identities = 50/313 (15%), Positives = 100/313 (31%), Gaps = 24/313 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L + + + + TKAA ++ A+S+S+ KL PLF+ + T Sbjct: 1 MELYQIDHFIAVSRHKHFTKAALEQRISQPALSRSIKKLEEELGVPLFIRKTKSIRLTKY 60 Query: 68 MVSMEQNLAEW-MQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + + + P + ++ L ++ L + ++YP Sbjct: 61 GEQFLIKAKQARLALDEGVQQIRESVNPNAGEISVSFLHTLGSRLMPQLIAEFKKKYPNV 120 Query: 127 TIKLRNWDYDSLDAI-TRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 +L + L + GE DI S E VL ++ + L Sbjct: 121 AFRLYQAANEHLQHMVETGEADICLSSPPLPNEHLEW----------TVLDTEPLYLVLP 170 Query: 186 KDHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 DHP + + + + + D + + L +A E L + Sbjct: 171 ADHPLADRKEVAIRSIAHEDFVCFKPGYGLRYVFDQMCRGLSISPKLAFEGEEVSTILGL 230 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 L +A P+ ++ V P+ F + E L K + +P Sbjct: 231 V--SAGLGVAILPKTAEH---------VHSPVAFCRVSDYRSERTIGLAVLKDHYLSPAA 279 Query: 305 VWLRETIKNLYAS 317 +E + Y Sbjct: 280 RNFKEFVIEYYRR 292 >UniRef50_P0ACR7 Uncharacterized HTH-type transcriptional regulator yfeR n=158 Tax=Proteobacteria RepID=YFER_ECOLI Length = 308 Score = 140 bits (353), Expect = 8e-32, Method: Composition-based stats. Identities = 42/266 (15%), Positives = 83/266 (31%), Gaps = 15/266 (5%) Query: 10 LNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMV 69 L L + QE+S ++A +RI ++ SAVS S+ +L L + + T Sbjct: 5 LKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDAGQ 64 Query: 70 SMEQNLAEWMQMSNLLLDKPHHQ-TPRGLKFELAAESPLMMIMLNALSKQIYQRYPQATI 128 + L + N L K +AA + ++ + ++RYP Sbjct: 65 QLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDIQF 124 Query: 129 KLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKD 187 L + +++I +G+VD G + E + S+ + +D Sbjct: 125 VLHDRPQQWVMESIRQGDVDFGIVIDPGPVG----------DLQCEAILSEPFFLLCHRD 174 Query: 188 HPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAA 246 + + +D L G + I + M A Sbjct: 175 SALAVEDYVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVA 234 Query: 247 QPDNLLLATAPRYCQYYNQLHQLPLV 272 + ++ P + L + Sbjct: 235 A--GIGISILPALALPLPEGSPLVVK 258 >UniRef50_Q1LFI3 Transcriptional regulator, LysR family n=1 Tax=Cupriavidus metallidurans CH34 RepID=Q1LFI3_RALME Length = 311 Score = 140 bits (353), Expect = 8e-32, Method: Composition-based stats. Identities = 52/302 (17%), Positives = 111/302 (36%), Gaps = 29/302 (9%) Query: 1 MKKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPL 60 M ++ +++ + RS + A++ I++T SAVSK ++ A LF S Sbjct: 13 MNFTLREF-----RVFRVVYELRSFSGASQTIHMTQSAVSKVCQEMEAKVGQRLFERSTR 67 Query: 61 GLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNALSKQI 119 ++PT L + ++ E + + + +A+ + + +L Sbjct: 68 KVTPTQLAHQLYGHVCEVLGTMDAAERSMQSLLNLEAGEVSVASSPMMCVGLLRGAVSAF 127 Query: 120 YQRYPQATIKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSD 178 ++ +P I + D +++ + G+ D G + + E L+++ Sbjct: 128 HEAHPAIRIGMHELSTDETIEYVVNGKADFGL----------VSMEEAHPKLSIEHLYNE 177 Query: 179 VPCVWLRKDHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPE 237 V DH + + + YP IS+ S +D V + ++ + Sbjct: 178 SMFVICAGDHELARKRKVSWELLADYPQISLHSTFSTRRTIDRVFASRHLAYSTSVEVGT 237 Query: 238 FEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLL--WH 295 ++ A L + P Y + + L ALP + +E P +L+ W+ Sbjct: 238 VLSAISFAKA--RLGVTVLPGYVREFVSELGLVARALP-------CEGVEHPISLITRWN 288 Query: 296 KR 297 R Sbjct: 289 AR 290 >UniRef50_D1XD01 Transcriptional regulator, LysR family n=1 Tax=Streptomyces sp. ACTE RepID=D1XD01_9ACTO Length = 337 Score = 140 bits (353), Expect = 9e-32, Method: Composition-based stats. Identities = 52/317 (16%), Positives = 101/317 (31%), Gaps = 24/317 (7%) Query: 7 TLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTP 66 L L+ + L ++ +V AA ++VT A ++SL +L PLF P G++ T Sbjct: 10 RLKFRHLILVDALSRQGTVVGAAAELHVTQPAATRSLHELEDILGVPLFERRPRGVTATI 69 Query: 67 LMVSMEQNLAEWMQMSNLLLDKPHHQTPRGL-KFELAAESPLMMIMLNALSKQIYQRYPQ 125 + Q+ + + ++L I ++ P Sbjct: 70 FGEAFTQHARAVLAQLTQAGRHVTELADADRGTVVVGTHLAGSNVLLPRAIAGIKRKRPY 129 Query: 126 ATIKLRNWDYDS-LDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 T+ +R ++ L + G VD L + + L+ + + + Sbjct: 130 LTVVVREASPEALLLELEAGRVDFVVG---------RLTAPSDERMVRRKLYDESVELVV 180 Query: 185 RKDHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRE-RTIAMSLPEFEQSL 242 R HP + Q L + P I ++ G + F Sbjct: 181 RAGHPLVGQQHVELAELVDLPWILPGAATVLRREIEEFFSRHGLALPPNRVETTSFLTVR 240 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 + + D ++A P LV L +P D L + +P Sbjct: 241 QLLLETD--VVAVLPSLIIR----DDTRLVGLRVPLDPIGH-----SVGLTMSAARTLSP 289 Query: 303 KIVWLRETIKNLYASMA 319 L ++++++ MA Sbjct: 290 SAQALIKSLEDIAGDMA 306 >UniRef50_A6T102 Transcriptional regulator, LysR family n=1 Tax=Janthinobacterium sp. Marseille RepID=A6T102_JANMA Length = 305 Score = 140 bits (353), Expect = 9e-32, Method: Composition-based stats. Identities = 47/269 (17%), Positives = 92/269 (34%), Gaps = 15/269 (5%) Query: 7 TLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTP 66 L L L + + T AA+R+++T SA+S + +L + LF + T Sbjct: 2 NLTLRQLRAFVAVAELSQFTLAAERLHITQSALSMLIRELEKELELKLFDRHTRMVRLTE 61 Query: 67 LMVSMEQNLAEWMQMSNLLLDKPHHQTPRGL-KFELAAESPLMMIMLNALSKQIYQRYPQ 125 + + + + + +A + L + +L ++ QR+P Sbjct: 62 HGEEFLLTARRVLSELEVAVMQSRESVNYKRGRVAVACSTVLAVTLLTPFMREFAQRHPG 121 Query: 126 ATIKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 + LR+ +S+ + G+VD + + L +FSD + + Sbjct: 122 IKLMLRDVAEESIKKRLLNGDVDFSVGTQLNPESEISELP----------IFSDHFVLLM 171 Query: 185 RKDHPALHQ-TWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 K HP Q L +YP I++ S L+ L+ L IA + Sbjct: 172 PKGHPLTKQTRIPLQAISQYPVIAMAPSSSIRAVLEAHLKRLDITLNIAYEASFPSTIIA 231 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLV 272 M + + + P + + Sbjct: 232 MVR--NGMGITILPANAHQLTSTQGIVVR 258 >UniRef50_B2T513 Transcriptional regulator, LysR family n=65 Tax=Proteobacteria RepID=B2T513_BURPP Length = 305 Score = 139 bits (352), Expect = 9e-32, Method: Composition-based stats. Identities = 41/282 (14%), Positives = 81/282 (28%), Gaps = 26/282 (9%) Query: 12 LLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSM 71 L+ + + R++++AA ++++ AVS L +L+ F +PL+ G+ TP + Sbjct: 5 QLITFAAVAEHRNISRAAVALHLSQPAVSGQLRQLQDEFGEPLYQRDGRGVRLTPAGEQL 64 Query: 72 EQNLAEWMQMSNLLLDKPHHQTP-RGLKFELAAESPLMMIMLNALSKQIYQRYPQATIKL 130 + A + +L L ++RYP T+ Sbjct: 65 ASYATRLRDTWRQAHAYRDALRGLEQGTLRIGASTTPASYLLPYLIADFHRRYPDVTLHT 124 Query: 131 RNWD-YDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHP 189 + + + + A+ VDI LP D + + HP Sbjct: 125 ADGNTTEIVGALDS--VDIAMIEGPVGV-------DLPPDTAVHSWREDEIVAIMPRTHP 175 Query: 190 ALHQTWN-------------LDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLP 236 + L F YP + ++ G +A+ + Sbjct: 176 LAELALSAQSAEVGQGGQAGLAAFGEYPLVLREAGSGVRQIVERAFARAGVPMRVALEIA 235 Query: 237 EFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPF 278 E + + + L P P Sbjct: 236 GVEGVKEAVRA--GMGIGFVSAMSMRHEDRALCLLSLSPEPL 275 >UniRef50_B4SSK9 Transcriptional regulator, LysR family n=3 Tax=Stenotrophomonas RepID=B4SSK9_STRM5 Length = 302 Score = 139 bits (352), Expect = 1e-31, Method: Composition-based stats. Identities = 55/321 (17%), Positives = 105/321 (32%), Gaps = 31/321 (9%) Query: 7 TLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTP 66 +++L L + +AA+R+ ++ +S+ + +L LFV S + T Sbjct: 2 SIELRHLRYFLAVADTLHFGQAAERLGMSQPPLSQQIRQLEDLIGARLFVRSHRRVQLTA 61 Query: 67 LMVSMEQNLAEWMQMSNLLLDK-PHHQTPRGLKFELAAE-SPLMMIMLNALSKQIYQRYP 124 +++ + +D+ Q + + + + + Q QRYP Sbjct: 62 AGELLQERARAIVLQVESAVDEVQRAQRGEQGELRIGLTRATPLSPQIPRSILQYRQRYP 121 Query: 125 QATIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVW 183 Q ++L + +DA+ G +D+G + +LP + LF D + Sbjct: 122 QVRLQLSEMNTLQQIDALLDGSLDVGIIRK----------RALPPELVAHSLFVDPLALI 171 Query: 184 LRKDHPAL-----HQTWNLDTFLRYPHISI--CWEQSDTWALDNVLQELGRERTIAMSLP 236 + DHPAL T +L F + P ++ + + G I Sbjct: 172 VHADHPALRRLSKQGTLSLRDFAQEPFVAFRRSAGAGIHDHMIALCAAAGFTPRIVQEAG 231 Query: 237 EFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHK 296 E + +AA + P C + F L WH Sbjct: 232 EASTLISLAAAGLGAAI--LPSSCDHIRVEGA--------RFVALADAGAHSEVQLAWH- 280 Query: 297 RNSHNPKIVWLRETIKNLYAS 317 R P I ++ +A Sbjct: 281 REGVTPLIRNFAGLLREAFAE 301 >UniRef50_P0ACR6 Uncharacterized HTH-type transcriptional regulator yeiE n=127 Tax=Proteobacteria RepID=YEIE_ECO57 Length = 293 Score = 139 bits (352), Expect = 1e-31, Method: Composition-based stats. Identities = 53/272 (19%), Positives = 86/272 (31%), Gaps = 15/272 (5%) Query: 7 TLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTP 66 + L L +++ S T+A+ + ++ SAVS +L L LF L Sbjct: 2 HITLRQLEVFAEVLKSGSTTQASVMLALSQSAVSAALTDLEGQLGVQLFDRVGKRLVVNE 61 Query: 67 LMVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + + ++ + A S + +L A+ + YPQ Sbjct: 62 HGRLLYP---RALALLEQAVEIEQLFREDNGAIRIYASSTIGNYILPAVIARYRHDYPQL 118 Query: 127 TIKL-RNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 I+L D + A+ VDIGF H I E D V+ Sbjct: 119 PIELSVGNSQDVMQAVLDFRVDIGFIEGPCH----------STEIISEPWLEDELVVFAA 168 Query: 186 KDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMA 245 P L+ P I +D +L + +AM L E Sbjct: 169 PTSPLARGPVTLEQLAAAPWILRERGSGTREIVDYLLLSHLPKFEMAMELGNSEAIKHAV 228 Query: 246 AQPDNLLLATAPRYCQYYNQLHQLPLVALPLP 277 + + R + Q L VA+PLP Sbjct: 229 RH-GLGISCLSRRVIEDQLQAGTLSEVAVPLP 259 >UniRef50_C5ALH3 Transcriptional regulator, LysR family protein n=1 Tax=Burkholderia glumae BGR1 RepID=C5ALH3_BURGB Length = 302 Score = 139 bits (352), Expect = 1e-31, Method: Composition-based stats. Identities = 45/255 (17%), Positives = 89/255 (34%), Gaps = 16/255 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L + +E + T+AA+R ++ SA+S S+ L L V + +S + Sbjct: 1 MELRQLRHFVAVAEEANFTRAAERCHIVQSALSTSIRLLEEELGARLLVRTTRRVSLSAA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRGL-KFELAAESPLMMIM-LNALSKQIYQRYPQ 125 + + + + + T K + L + L AL + Y +P Sbjct: 61 GAVFLDSARRALDILDRAGLEVADITSVRRGKLSIGTVQSLPQFLELPALLSRFYHAHPG 120 Query: 126 ATIKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 ++L L + + E+D+ + + V+ D + Sbjct: 121 VEVRLVQGGAAELNEKVDARELDLAILP----------IEERNERLASHVIACDEMVLAC 170 Query: 185 RKDHPALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 R+DHP L + + Q +D E G +R +A + + + L Sbjct: 171 RRDHPLAASGQVPLSRLTKQAFVDFVPGQGTRRLVDRGFAEAGLQRRVAFEIGDLDTLLE 230 Query: 244 MAAQPDNLLLATAPR 258 + Q L +A P Sbjct: 231 LVRQ--GLGVALLPE 243 >UniRef50_D0Z9H4 Transcriptional regulator, LysR family n=40 Tax=cellular organisms RepID=D0Z9H4_EDWTE Length = 302 Score = 139 bits (352), Expect = 1e-31, Method: Composition-based stats. Identities = 46/299 (15%), Positives = 98/299 (32%), Gaps = 24/299 (8%) Query: 1 MKKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPL 60 M SI L + + +A+ R+N++ A+S ++ L LFV + Sbjct: 1 MAMSIK-----QLRAFLAVAHTLNFAQASVRLNLSQPALSLAIRSLEDALGGALFVRTTR 55 Query: 61 GLSPTPLMVSMEQNLAEWMQMSNLLLDK-PHHQTPRGLKFELAAESPLMMIMLNALSKQI 119 + TP + + + + + + T + K +AA L + ++ Sbjct: 56 QVRLTPEGEAFFPLVRQLLVDWDNTTETIRQRFTLQVGKVAIAAMPSFAANPLPFILQRF 115 Query: 120 YQRYPQATIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSD 178 +RY + + + + + I G V++G + + + L + Sbjct: 116 RRRYAGVNVVVHDVINEAVYEMIAEGRVEMGIAFEPEPG----------ARLHFTPLGMN 165 Query: 179 VPCVWLRKDHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPE 237 + P Q L I++ S L+ L + G++ +A + Sbjct: 166 RFIAIVPPGCPFARQQDIGWRQLLSLDFITLQRPSSMRLLLEQRLAQNGKQLPVAFESHQ 225 Query: 238 FEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHK 296 M A + L ++ P +C + LP E + +L+ H Sbjct: 226 LITVGNMVA--NGLGVSAVPAWCARQMRQLGAVC----LPLIEPVIENRFGLVSLMHHP 278 >UniRef50_C5CPN7 Transcriptional regulator, LysR family n=1 Tax=Variovorax paradoxus S110 RepID=C5CPN7_VARPS Length = 299 Score = 139 bits (352), Expect = 1e-31, Method: Composition-based stats. Identities = 48/306 (15%), Positives = 98/306 (32%), Gaps = 20/306 (6%) Query: 11 NLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVS 70 LL L L R + +AA+ +N++ A +K L +L + LF G+ PTP Sbjct: 7 RQLLLLARLDTHRHLGRAAEAMNISQPAATKLLQQLEDSLGERLFERLARGMEPTPYGEI 66 Query: 71 MEQNLAEWMQMSNLLLDKPHHQTP-RGLKFELAAESPLMMIMLNALSKQIYQRYPQATIK 129 + + + ++ + + + +L + ++R+PQ + Sbjct: 67 LIRYARRVLSDFGSAREEMLALRSGLSGSLRVGSVPGAVPELLAPALVEYHRRHPQVAVS 126 Query: 130 LRNWDYDSLD-AITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDH 188 + D + + +G+VD+ R S L + V +R H Sbjct: 127 VVVETSDVMQAQLEQGDVDLVLG--------RLTDSHDEAKYASVPLLGESQVVVVRAAH 178 Query: 189 PAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTI-AMSLPEFEQSLFMAA 246 P T L + + + ++E G + + + + Sbjct: 179 PVFERATVTLAEMANWSWVLQPPGSPQRGRFEAAMREAGIQARLDIIETASPIAITALLE 238 Query: 247 QPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVW 306 D + +Y +L L V + LP P L+ + + +P Sbjct: 239 NSDMAAV-MPASQASHYARLGVLRTVPVELPVRVP-------PICLVTRQDRALSPAAAQ 290 Query: 307 LRETIK 312 R + Sbjct: 291 FRRQLL 296 >UniRef50_Q67KY5 LysR family transcriptional regulator n=1 Tax=Symbiobacterium thermophilum RepID=Q67KY5_SYMTH Length = 298 Score = 139 bits (352), Expect = 1e-31, Method: Composition-based stats. Identities = 61/269 (22%), Positives = 99/269 (36%), Gaps = 17/269 (6%) Query: 13 LLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSME 72 L +++ RS +KAA R ++ AVS+ + + F L SP G+ PT Sbjct: 6 LRVYCDIIETRSFSKAAARNFISQPAVSQQVKAMEEHFQQRLIERSPQGIYPTEAGRIFY 65 Query: 73 QNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQIYQRYPQATIKLR 131 + E ++ L + + + +A + + L K+ Q YPQA I L Sbjct: 66 EAAREIVERYQALEQQMANLSQSVSGTIRVATVYTVGLHDLPPYIKKFIQTYPQARIHLE 125 Query: 132 -NWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPA 190 + +A+ + +VDIG R ++ L SD V + +HP Sbjct: 126 YSRTNKIYEAVRQNQVDIGIVAYPQEGRQLGVIP----------LPSDELVVIVSPNHPL 175 Query: 191 --LHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQP 248 + L R P I+ + A D VL + G + I E Sbjct: 176 ARAGKPVALQQLHRLPFIAFDPDIPTRKATDRVLNDHGVDVEIIHEFDNVETIKRSVEA- 234 Query: 249 DNLLLATAPRYCQYYNQLHQLPLVALPLP 277 L ++ PR C + LVALP+ Sbjct: 235 -ELGVSIIPRRCAQWEVRSG-SLVALPIA 261 >UniRef50_Q47141 Hca operon transcriptional activator n=46 Tax=Gammaproteobacteria RepID=HCAR_ECOLI Length = 296 Score = 139 bits (351), Expect = 1e-31, Method: Composition-based stats. Identities = 48/315 (15%), Positives = 98/315 (31%), Gaps = 25/315 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L + Q + T+AA++++ + ++S + L PL V ++ T Sbjct: 1 MELRHLRYFVAVAQALNFTRAAEKLHTSQPSLSSQIRDLENCVGVPLLVRDKRKVALTAA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQAT 127 Q+ ++ + + + + + +L + R P Sbjct: 61 GECFLQDALAILEQAENAKLRARKIVQEDRQLTIGFVPSAEVNLLPKVLPMFRLRQPDTL 120 Query: 128 IKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRK 186 I+L + + I RGE+D+G + IDY LF + V L Sbjct: 121 IELVSLITTQQEEKIRRGELDVGLMRHPVY----------SPEIDYLELFDEPLVVVLPV 170 Query: 187 DHPALHQ-TWNLDTFLRYPHISICW--EQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 DHP H+ +S S + + + I ++ Sbjct: 171 DHPLAHEKEITAAQLDGVNFVSTDPVYSGSLAPIVKAWFAQENSQPNIVQVATNILVTMN 230 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 + L + P Y +N + F + + W K+ P Sbjct: 231 LVGM--GLGVTLIPGYMNNFNTGQ--------VVFRPIAGNVPSIALLMAW-KKGEMKPA 279 Query: 304 IVWLRETIKNLYASM 318 + ++ AS+ Sbjct: 280 LRDFIAIVQERLASV 294 >UniRef50_D1BJH1 Transcriptional regulator n=2 Tax=Actinomycetales RepID=D1BJH1_SANKS Length = 309 Score = 139 bits (351), Expect = 1e-31, Method: Composition-based stats. Identities = 54/267 (20%), Positives = 91/267 (34%), Gaps = 14/267 (5%) Query: 10 LNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMV 69 L L L L + VT AA + V VS+++ +L PL G+ TP Sbjct: 10 LPHLRLLVALGEVEHVTIAAAMLGVPQPTVSRTVRRLEQQIGAPLLEPDGRGVRLTPAAR 69 Query: 70 SMEQNLAEWMQMSNLLLDKPHHQTPRGL-KFELAAESPLMMIMLNALSKQIYQRYPQATI 128 ++ + + L + R +A ++ L ++ L + + P Sbjct: 70 TLVPYAQRALDVLTDGLAAVETEGQRARTTVRIAFQTSLGEQLVPELIRTVRADDPTVRF 129 Query: 129 KLRNWDYDS-LDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKD 187 L S LD++ E DI R P P + LF + + + Sbjct: 130 VLSQGARSSCLDSLLEREADIALVSRLDPP---------PDGVRVVPLFEQELVLLVPEG 180 Query: 188 HP-ALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAA 246 HP AL + P +++ ++D + E G +IA + + A Sbjct: 181 HPAALAGGAAVVDLASEPLVTLKTGYGLRGSVDELFAEAGVLPSIAFEGEDLHTLTGLVA 240 Query: 247 QPDNLLLATAPRYCQYYNQLHQLPLVA 273 L +A APR Q+PL Sbjct: 241 A--GLGVAVAPRTTATPAGCVQVPLAD 265 >UniRef50_P52696 Uncharacterized HTH-type transcriptional regulator ybhD n=68 Tax=Proteobacteria RepID=YBHD_ECOLI Length = 317 Score = 139 bits (351), Expect = 1e-31, Method: Composition-based stats. Identities = 43/280 (15%), Positives = 96/280 (34%), Gaps = 23/280 (8%) Query: 1 MKKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPL 60 MK ++++ +L + S AAK +N+T A+++ + K+ LF + Sbjct: 1 MKHELSSM-----KAFVILAESSSFNNAAKLLNITQPALTRRIKKMEEDLHVQLFERTTR 55 Query: 61 GLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGL-KFELAAESPLMMIMLNALSKQI 119 ++ T + E ++ + L LA + L + Sbjct: 56 KVTLTKAGKRLLPEARELIKKFDETLFNIRDMNAYHRGMVTLACIPTAVFYFLPLAIGKF 115 Query: 120 YQRYPQATIKLRNWDYDS-LDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSD 178 + YP +++ ++ ++++ E D G + S ID+ L ++ Sbjct: 116 NELYPNIKVRILEQGTNNCMESVLCNESDFGINMNNVTNSS----------IDFTPLVNE 165 Query: 179 VPCVWLRKDHPALHQTW-NLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPE 237 + R+DHP + + Y I + + ++ L + + + Sbjct: 166 PFVLACRRDHPLAKKQLVEWQELVGYKMIGVRSSSGNRLLIEQQLADKPWKLDWFYEVRH 225 Query: 238 FEQSLFMAAQPDNLLLATAPRYC---QYYNQLHQLPLVAL 274 SL + L ++ P Y+ + +PLV Sbjct: 226 LSTSLGLVEA--GLGISALPGLAMPHAPYSSIIGIPLVEP 263 >UniRef50_Q5NYN4 Transcriptional regulator n=4 Tax=Rhodocyclaceae RepID=Q5NYN4_AZOSE Length = 306 Score = 139 bits (351), Expect = 2e-31, Method: Composition-based stats. Identities = 43/271 (15%), Positives = 88/271 (32%), Gaps = 19/271 (7%) Query: 13 LLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSME 72 L + + S T+AA+ + +T AV+ + +L F+ L +S TP + Sbjct: 6 LQVFSAVAKHGSFTRAAEHLFMTQPAVTFQIKQLEEHFNTRLLERGHGKVSLTPAGEVVL 65 Query: 73 QNLAEWMQMSNLLLDKPHHQ-TPRGLKFELAAESPLMMIMLNALSKQIYQRYPQATIKLR 131 + +S L + G + + + L L ++ +YP+ ++ Sbjct: 66 AYADRILDLSEELESRVSELTDELGGTLSIGTSTTIAAYWLPKLLERFKHKYPRVIPRVV 125 Query: 132 NWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPA 190 + + D + E+D+G + S AI+ D V R HP Sbjct: 126 VGNSQLTEDRVAARELDLGL----------IEIVSEQPAIERFTAARDELLVICRPGHPL 175 Query: 191 L-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGR---ERTIAMSLPEFEQSLFMAA 246 L + I+ + + G E + L ++ Sbjct: 176 ASKSRLTAHDLLDHAFITRDPGNAIRELAEQFFAAAGIGIDEVNVCAELGSLATVKYLVG 235 Query: 247 QPDNLLLATAPRYCQYYNQLHQLPLVALPLP 277 + +A + + + LV++PL Sbjct: 236 EGIGFAIA---SFAAIQRDIREERLVSVPLE 263 >UniRef50_D1REM2 Putative LysR family transcriptional regulator n=1 Tax=Legionella longbeachae D-4968 RepID=D1REM2_LEGLO Length = 297 Score = 138 bits (350), Expect = 2e-31, Method: Composition-based stats. Identities = 40/243 (16%), Positives = 83/243 (34%), Gaps = 14/243 (5%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +D+ + +++ RS T AAKR+++T SA+SK + K+ LF+ ++ T Sbjct: 1 MDIVEIKSFLAVIEFRSFTLAAKRVHITQSAMSKRIQKMENELGVRLFIVEGSKITLTEA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTP-RGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + N + + A + +L + + Sbjct: 61 ASHFVPYARQMLAAYNSAIKSFKDDAQMLQHHIVVGATVFVSHYILPSFLSYLNTIDSSL 120 Query: 127 TIKLRNWDYDSLDA-ITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 I +R ++ + RG VD+ S LP I L+ + Sbjct: 121 IIHIRTMAEHDIEDYLNRGTVDLVISPE----------RDLPSKIIATQLWQEKYYYVAN 170 Query: 186 KDHPA--LHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 K H +++ +L F+ YP I ++N E +++ + + Sbjct: 171 KKHELSQINRVLSLADFVNYPSIFTQKSGVIRDKVENAFNEKELNLNVSLEISTLDAIKS 230 Query: 244 MAA 246 + Sbjct: 231 LVE 233 >UniRef50_C7H9N7 Transcriptional regulator, LysR family n=2 Tax=Faecalibacterium prausnitzii RepID=C7H9N7_9FIRM Length = 291 Score = 138 bits (349), Expect = 2e-31, Method: Composition-based stats. Identities = 42/263 (15%), Positives = 81/263 (30%), Gaps = 13/263 (4%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L + + + S ++AA+ + + SAVS +A+L A + PLF + T Sbjct: 1 MELRTINTFLHIAELHSFSRAARELGYSQSAVSAQVAQLEAELETPLFDRVGKTVRLTDA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQAT 127 + + + +A + L L ++ + PQ Sbjct: 61 GQTFLTYARSLLATAEQAKAALQPARQVSGTLRVALADSVCSTFLPDLLQRYHALCPQVE 120 Query: 128 IKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRK 186 + LR D L + ++D+ ++ + + +L+ + CV Sbjct: 121 LVLRTATDDEMLQMLGSNQIDLAYTLDKPLLQPSFVLAVDEP---------EPICVVAPA 171 Query: 187 DHPALHQ-TWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMA 245 HP Q L + S ALD + G + L M Sbjct: 172 GHPLAGQAEVTLQELAGQEFLLTERGMSYRDALDQCMAAQGLAIKPFLELGSASLLCQMV 231 Query: 246 AQPDNLLLATAPRYCQYYNQLHQ 268 + L+ P Y Sbjct: 232 EH--GMGLSFLPEYIVQNALAAG 252 >UniRef50_D1PPF0 Transcriptional regulator, LysR family n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PPF0_9FIRM Length = 292 Score = 138 bits (349), Expect = 2e-31, Method: Composition-based stats. Identities = 50/289 (17%), Positives = 97/289 (33%), Gaps = 21/289 (7%) Query: 10 LNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMV 69 + L + Q + T AA+ +++T AV++++ +L ++ LF LSPT Sbjct: 3 IRHLRIFVAVYQAENATHAAEELHMTQPAVTRAIQELEQYYGTRLFERMYRHLSPTECAR 62 Query: 70 SMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQATIK 129 + + + + + + A L +L L+ + Q P ++ Sbjct: 63 RLYPQAVHLLDSFDRIETGLRNWD-SMGIVRVGATVTLGSTVLPGLAHRFAQENPGIQLQ 121 Query: 130 LRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDH 188 + + +L A+ +D+ + + E + +D+ C + Sbjct: 122 VTVANGGTLTAALCENRLDLAL----------LESTPSLPDLHTEEIGTDLLCAVMTPAD 171 Query: 189 PA-LHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQ 247 P QT L+ P + + AL + L+ G I E L AA+ Sbjct: 172 PLAAGQTVTLEQLSAAPLLVREEGSTARAALQSALEAQGLPLHIVWESVSTEALLQAAAE 231 Query: 248 PDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHK 296 L +A P + P D ++ V WHK Sbjct: 232 --GLGVAVLPEPRVKNAAAAGIVCTR---PIDGQALRRHRV---AAWHK 272 >UniRef50_C7I3E5 Transcriptional regulator, LysR family n=1 Tax=Thiomonas intermedia K12 RepID=C7I3E5_THIIN Length = 301 Score = 138 bits (349), Expect = 2e-31, Method: Composition-based stats. Identities = 37/266 (13%), Positives = 86/266 (32%), Gaps = 21/266 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L + ++ S ++AA+R++++ +S + L L S G++ T Sbjct: 1 MELRQLRYFVTIAEQGSFSRAAERLHISQPPLSTQIKALEDEIGARLLERSNRGVTLTAA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + +++ + +++ + S +L K RYPQ Sbjct: 61 GAAFFEDIRSVLAQLEHAVERVRQAERGDAGTLSIGFVSIADFGILPPTLKSFRARYPQV 120 Query: 127 TIKLRNWDYDS-LDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 ++L D+ + + E+D+ + + L + + Sbjct: 121 DVQLHELTTDAQIRELRAAELDLSIGLAPVDE----------PGLTFTPLLQEPLMLAAP 170 Query: 186 KDHPALH---QTWNLDTFLRYPHISICWEQSDTWALDNVL---QELGRERTIAMSLPEFE 239 HP L +L + P I + D L Q G I + + Sbjct: 171 TTHPVLQEGSGAVDLRALAKEPFI-VPPRNIGPGLYDLTLSLCQAAGFAPRITQHARQMQ 229 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQ 265 + + + + +A P + + Sbjct: 230 TVIGLVSC--GMGVALVPASLRQLKR 253 >UniRef50_A1BBY8 Transcriptional regulator, LysR family n=1 Tax=Paracoccus denitrificans PD1222 RepID=A1BBY8_PARDP Length = 306 Score = 138 bits (349), Expect = 2e-31, Method: Composition-based stats. Identities = 49/273 (17%), Positives = 91/273 (33%), Gaps = 16/273 (5%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 + ++ L +M++ SVT AA ++++ A SK L L LF L P Sbjct: 14 LAPMNTRQLEIFCAIMRDGSVTAAANSLSISQPAASKLLHHLEDQLGYALFQRIGGRLIP 73 Query: 65 TPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNALSKQIYQRY 123 TP + ++ A ++ +L D R L A P+ +L + + Sbjct: 74 TPEADLLHEDAARVLREMEVLGDLARRVGERRLGLLRLGASLPVAWSVLPPALARFRASH 133 Query: 124 PQATIKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCV 182 P+ I L + +A+ G +D+ + L L + + L V Sbjct: 134 PEVRIHLHTLPKQEIAEALRTGAIDLAVT----------LSPILAPTVRTQTLAPIPLAV 183 Query: 183 WLRKDHPALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQS 241 + + H P IS ALD + G R +A+ + + Sbjct: 184 LMPQGHALAGLDAVAPGDLAGQPLISYGSHAEIGPALDQAFRAEGLVRQVAIQVASSVAA 243 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVAL 274 + + L +A + + L + Sbjct: 244 VPLVRA--GLGVALVDGLVD-WADMAGLAMRPF 273 >UniRef50_A3I8L6 Transcriptional regulator, LysR family protein n=1 Tax=Bacillus sp. B14905 RepID=A3I8L6_9BACI Length = 292 Score = 138 bits (349), Expect = 2e-31, Method: Composition-based stats. Identities = 32/269 (11%), Positives = 81/269 (30%), Gaps = 15/269 (5%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +++ L + +E TKAA+++ ++ +S+ + L PLF + T Sbjct: 1 MEIRHLHYFMAVCEELHFTKAAEKLGISQPTLSQQIRVLEDELGMPLFDRIGKKIVVTEA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + + + + + + L +Q++P+ Sbjct: 61 GALLFTYATAMLNTLQNVKGAIKDLQEVQGGQIRVGIMPSDLDYRITQLVIDFHQKFPRV 120 Query: 127 TIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRK 186 + + D + + EVDIG ++ L + V + K Sbjct: 121 KLTIL-ASIDIMRQVLENEVDIGIGTNVEPHDRLVIIP----------LRKEEYVVTVSK 169 Query: 187 DHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMA 245 +HP + + P + ++ +++ G + + + + Sbjct: 170 EHPWAHREAVTIAELKDLPLVMYPEGFLGREIVEETVKKHGFQLHTILETSSVTSIMNLV 229 Query: 246 AQPDNLLLATAPRYCQYYNQLHQLPLVAL 274 N+ P L ++ L Sbjct: 230 RA--NIGATVQPYPLIQQMNDSDLRIIRL 256 >UniRef50_Q97DV9 Transcriptional regulator, LysR family n=1 Tax=Clostridium acetobutylicum RepID=Q97DV9_CLOAB Length = 312 Score = 138 bits (349), Expect = 2e-31, Method: Composition-based stats. Identities = 39/265 (14%), Positives = 96/265 (36%), Gaps = 16/265 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +D ++ + +E+S+++AA+R+ ++ ++S+ + +L LF + ++ T Sbjct: 1 MDFRQFEYVKTIAEEKSISRAAERLYISQPSLSQYIIRLENSLGVKLFDRTSATITLTFA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHH-QTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + ++N L + + + + S +L + + Y+ YP Sbjct: 61 GEKYIETARNIINLNNQLTKELNDIANLSKGRVIIGVPSQAGRYILPLVIPKFYKEYPNI 120 Query: 127 TIKL-RNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 I + N + + G++DI L I YE + ++ + Sbjct: 121 EIIVEENIVSELEKMLLEGKIDIAI----------LTLPVQHEKITYESIMNERIFLIAP 170 Query: 186 KDHPA--LHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 K HP + + + I + Q +D++ +G + I + + + + Sbjct: 171 KKHPICSVDGRISFNFIRNEKFILLKKGQRIRLIVDDIFSRIGAKPNIILEITNLDAAYR 230 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQ 268 MA + P Y + Sbjct: 231 MA--SSGMGFTIVPENVLYLLNTNG 253 >UniRef50_C1XNG0 Transcriptional regulator, COG0583 n=2 Tax=Meiothermus RepID=C1XNG0_MEIRU Length = 312 Score = 138 bits (349), Expect = 2e-31, Method: Composition-based stats. Identities = 45/293 (15%), Positives = 94/293 (32%), Gaps = 21/293 (7%) Query: 7 TLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTP 66 + L L+ + + S++KA +NVT S V++++ KL LF G+ T Sbjct: 2 QISLKQLVYFIAVAESGSISKALTSLNVTQSVVTEAIKKLEETLGAELFTRHARGMILTH 61 Query: 67 LMVSMEQNLAEWMQMSNLLLDKPHH-QTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQ 125 ++ E + + L S + L L + + +P Sbjct: 62 AGHQFLRHAHEVLAALRNAEQAIRERPDATTGQLNLGVTSLVTAYYLPYLLDRFERVFPG 121 Query: 126 ATIKLRNWDYDSLDAIT-RGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 + + ++ + GE+D+ + A++ L VWL Sbjct: 122 VQVAVVEDRRGYIEHLLINGELDVAVMNVSMVDKQ---------ALETRTLLRAPWRVWL 172 Query: 185 RKDHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 +HP + Q +L+ + + + + + L +A+ E Sbjct: 173 PTNHPLVQQEAVSLENLREERFLYLK--NDELEEVTQQIYRLSGFPRVAVRTDSIEAMRS 230 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHK 296 + A + +A P L L + PL + + + W + Sbjct: 231 LVAL--GIGVAVLPNLMYRPWSLEGDRLESRPL-----LENLPRLEIGVAWRR 276 >UniRef50_C6D0W9 Transcriptional regulator, LysR family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D0W9_PAESJ Length = 296 Score = 138 bits (349), Expect = 3e-31, Method: Composition-based stats. Identities = 31/241 (12%), Positives = 75/241 (31%), Gaps = 13/241 (5%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +++ L Q + E T+AA ++ +T +S + +L PLF ++ T Sbjct: 1 MEIRQLEYFQAICDELHFTRAADKLGITQPTMSYQIKQLEEELGVPLFHRIGKKIALTEA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRGL-KFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + + + ++ + + +++ L + +YP Sbjct: 61 GFILLNHSRNIFRSIDGAREEISELHHMERGSLTIGTLIGEINDLVSGLLVDFHNKYPGI 120 Query: 127 TIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRK 186 +IKL D +D + + E+D + L+ + Sbjct: 121 SIKLLAL-EDVVDPLLQDELDFAVTIFPVD----------DDRFSKVSLYEEEFYFVAHS 169 Query: 187 DHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMA 245 + P + ++ ++ P I +D V G + + L + Sbjct: 170 NSPLSGEPSVTIEEAMKEPIIMFPKTHRCRQLIDTVCSMHGVAWEPVIETSAIKSILSLV 229 Query: 246 A 246 Sbjct: 230 Q 230 >UniRef50_C4DFU1 Transcriptional regulator, COG0583 n=1 Tax=Stackebrandtia nassauensis DSM 44728 RepID=C4DFU1_9ACTO Length = 309 Score = 138 bits (349), Expect = 3e-31, Method: Composition-based stats. Identities = 48/270 (17%), Positives = 92/270 (34%), Gaps = 11/270 (4%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 D N L + +E SVT AA +++ +VS LA+L PL G+ T Sbjct: 2 FDENRLRVFVAVAREGSVTAAAAKLHYAQPSVSHHLARLEEEIGAPLVSRLGRGIRLTEA 61 Query: 68 MVSMEQNLAEWMQMSNLLLDK-PHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + E + + + H LAA + ++ + + YP Sbjct: 62 GRLFAERAEEILGRIDAARTELASHAGLVNGHVRLAAFPTALAALVPSAAGAFADAYPGV 121 Query: 127 TIKLRNWD-YDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + L + ++ A+ RGEVDI + + A+ LF + + Sbjct: 122 DVDLTEAEPPQAIAALRRGEVDICLAFHYGATPPADW-----EALSVAPLFDEPVYLVTS 176 Query: 186 KDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMA 245 L ++ I+ L + + G ++A ++ + Sbjct: 177 PGSSPSGPRDELASYADRRWIA--GCAQCRAHLLSACEASGFTPSVAFETDDYVAVQALV 234 Query: 246 AQPDNLLLATAPRYCQYYNQLHQLPLVALP 275 AQ + ++T P ++ ++ L LP Sbjct: 235 AQ--GMGVSTLPGLALRAHRDERVRLDLLP 262 >UniRef50_UPI000174499E transcriptional regulatory protein, LysR family n=1 Tax=Verrucomicrobium spinosum DSM 4136 RepID=UPI000174499E Length = 302 Score = 138 bits (349), Expect = 3e-31, Method: Composition-based stats. Identities = 46/271 (16%), Positives = 87/271 (32%), Gaps = 15/271 (5%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 LD L +L +E S T+A + +++T SA+S ++ L LF + T Sbjct: 6 LDSRQLRAFTVLAREGSFTQAGRALHLTQSAISHAIRALEEDLGCMLFHRQGKRVLLTHH 65 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRGL-KFELAAESPLMMIMLNALSKQIYQRYPQA 126 + ++ E + L + + + +L + ++ +P Sbjct: 66 GRELLRHAEEIQRQMALARASLGALDQNPRGQIRIGSTPAASQFILPTVLREFKDSFPLY 125 Query: 127 TIKLRN-WDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 +I + D+L + +G +D+ R +D LF D Sbjct: 126 SISIVPGETPDTLQRLEQGVLDLAVCLRPRDV----------ARVDCRPLFEDELIFLAS 175 Query: 186 KDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMA 245 HP Q +I S + +LG + L E + Sbjct: 176 PLHPWAQQHPKTKDLAGETYIISSRNSSTFEMIGEYFLKLGVRPKSFIELGNTEAIKELV 235 Query: 246 AQPDNLLLATAPRYCQYYNQLHQLPLVALPL 276 L +A + ++ LV+LPL Sbjct: 236 KL--GLGVAMVAAWTAP-AEIKSGELVSLPL 263 >UniRef50_B8G0C5 Transcriptional regulator, LysR family n=2 Tax=Desulfitobacterium hafniense RepID=B8G0C5_DESHD Length = 304 Score = 138 bits (349), Expect = 3e-31, Method: Composition-based stats. Identities = 61/311 (19%), Positives = 123/311 (39%), Gaps = 19/311 (6%) Query: 10 LNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMV 69 L L L + + S++ AA+RI +T AVS S++KL LF + G PT + Sbjct: 3 LEQLYHLVEVAKYNSISIAAERIYITQPAVSASISKLEDELGVLLFKRTTKGAYPTDIGQ 62 Query: 70 SMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQATIK 129 ++ + E +Q + + + + + +A + ++ + + + +P ++ Sbjct: 63 TIIEAAEEILQKVD-FIKELANTSALAGNVTIATIPSMCDKIMPHVLSFLKEAHPGISVS 121 Query: 130 L-RNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDH 188 L L+ I G DIG + I +E LF D +++ K+ Sbjct: 122 LHVGESIQVLNHIQSGTADIGIVIMTEEIQE--------KNIYFEKLFHDEFLIYVGKNS 173 Query: 189 PAL-HQTWNLDTFLRYPHISICWE-QSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAA 246 P Q+ L L YP ++ E + + ++L++ I+ FE + Sbjct: 174 PLANKQSVTLQEALEYPVVAYNDEFSRNNGGITSLLKKYS-SPKISFRFDNFEMIKRTVS 232 Query: 247 QPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVW 306 Q ++ P++ N ++QL +P+ Q L++ L+W KR+ + Sbjct: 233 Q--GTFISFFPKFMSK-NDVYQLSHEIVPIAI---QDVTLDITIALIWAKRHVFSAAEKE 286 Query: 307 LRETIKNLYAS 317 +K+ Sbjct: 287 FIAILKSFCEE 297 >UniRef50_C1XGE6 Transcriptional regulator, COG0583 n=2 Tax=Meiothermus RepID=C1XGE6_MEIRU Length = 297 Score = 138 bits (348), Expect = 3e-31, Method: Composition-based stats. Identities = 41/236 (17%), Positives = 78/236 (33%), Gaps = 13/236 (5%) Query: 13 LLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSME 72 L + QE SV +AA + +T VS+ L L A LF L T + Sbjct: 13 LRVFLCVAQEGSVGRAALSLGMTQPGVSQHLQALEAQIGQVLFHRQGRRLVLTKTGQDLL 72 Query: 73 QNLAEWMQMSNLLLDKPHHQTPRGL-KFELAAESPLMMIMLNALSKQIYQRYPQATIKLR 131 +Q + + E+ A + + + +L + + YP+ IKL Sbjct: 73 PEARRAVQALEGFMQAAQALERLERGRVEIGASTTMAVYVLPRYLTEFKRLYPEIRIKLE 132 Query: 132 NWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPA 190 + + L + +GE+++ H + ++ + D V + +HP Sbjct: 133 SGSSEGLTQRLLQGELELAVVEAVEHLE----------GFERQLFYEDELVVIVPPEHPW 182 Query: 191 L-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMA 245 + + P I L + L++ G E E + + Sbjct: 183 ARKEEIAPEQLAEVPLIVRQPGAMTFRVLGSALEQAGLEVNPIFYTDNHEVTKRLV 238 >UniRef50_Q0S205 Transcriptional regulator, LysR family protein n=1 Tax=Rhodococcus jostii RHA1 RepID=Q0S205_RHOSR Length = 304 Score = 138 bits (348), Expect = 3e-31, Method: Composition-based stats. Identities = 47/250 (18%), Positives = 82/250 (32%), Gaps = 12/250 (4%) Query: 10 LNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMV 69 L L L L + VT AA + + VS+ + +L D PL G+ T Sbjct: 10 LPHLPVLVALGEVEHVTVAAAMLGMPQPTVSRIIRRLEKQLDIPLLEPDGRGVRLTDAGR 69 Query: 70 SMEQNLAEWMQMSNLLLDKPHHQT-PRGLKFELAAESPLMMIMLNALSKQIYQRYPQATI 128 ++ + LD + +A + L ++ L + + P Sbjct: 70 TLVPYAQRALAAVVDGLDAVQSEDRQARATVRVAFQMTLGEHLVPELIRTVRATDPTIRF 129 Query: 129 KLRNWDYDS-LDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKD 187 L + LDA+ E DI + R + P P + LF V + + Sbjct: 130 VLSQGARRTCLDALLNREADIALASRLTPP---------PAGLTVTPLFEQPLVVLVPSE 180 Query: 188 HPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAA 246 HP T + P +++ +LD++ G TIA + + A Sbjct: 181 HPRATSTSMTIRDLASEPIVTLKPGYGLRGSLDDLFARAGALPTIAFEGEDVRTVHGLVA 240 Query: 247 QPDNLLLATA 256 + + A Sbjct: 241 SGLGVGIVPA 250 >UniRef50_A0JW92 Transcriptional regulator, LysR family n=3 Tax=Micrococcaceae RepID=A0JW92_ARTS2 Length = 306 Score = 138 bits (348), Expect = 3e-31, Method: Composition-based stats. Identities = 39/269 (14%), Positives = 77/269 (28%), Gaps = 14/269 (5%) Query: 11 NLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVS 70 L + +ER +AA R+++ +S+ + +L PL V + + TP Sbjct: 4 RHLKYFIAVAEERHFGRAAARLHMAQPPLSQQIRQLEEQLGTPLMVRTTRKVELTPAGQV 63 Query: 71 MEQNLAEWMQMSNLLLDKPHHQ-TPRGLKFELAAESPLMMIMLNALSKQIYQRYPQATIK 129 + +Q +L + ++ + + + P I Sbjct: 64 LLDRGRVLLQELQVLESDVQQVGEGATGVLRVGFTGTATYRLMPIIVQAARRTLPGLRIT 123 Query: 130 LR--NWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKD 187 ++ A+ G +D H + L ++L D L D Sbjct: 124 VQGEMLTPQMEAALEEGRLDAAVLRPPVHSGAIAL----------KLLEQDQLVAALPAD 173 Query: 188 HPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAA 246 P T L I + + + ++ G + + E L + A Sbjct: 174 SPLAEKGTLELAALSEEGFIGYPGYSAVSSIFVDACRKAGFQPRVVQEAKETSTLLSLVA 233 Query: 247 QPDNLLLATAPRYCQYYNQLHQLPLVALP 275 + L Y + PL P Sbjct: 234 SGMGIALVPMTSRMFSYQGVAFRPLRNPP 262 >UniRef50_Q0A8N9 Transcriptional regulator, LysR family n=4 Tax=Gammaproteobacteria RepID=Q0A8N9_ALHEH Length = 336 Score = 138 bits (348), Expect = 3e-31, Method: Composition-based stats. Identities = 51/282 (18%), Positives = 98/282 (34%), Gaps = 24/282 (8%) Query: 10 LNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMV 69 L L QE S+++AA+R+ ++ +VS + L LF + TP Sbjct: 14 LKQLRAFCHAAQEGSISRAAQRLELSQPSVSLQIQALERELGIALFERRGPRIRLTPDGE 73 Query: 70 SMEQNLAEWMQMSNLLLDKPHHQTPR-----GLKFELAAESPLMMIMLNALSKQIYQRYP 124 ++ + ++ + L P R + ++AA + +L L KQ RYP Sbjct: 74 TLYELAQPLVEGVDAL---PERFAARHQRLQTGRLDIAAGESTTLYILPDLLKQFMARYP 130 Query: 125 QATIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVW 183 +KL N D + A+ EVD+ LP + Y +++ + Sbjct: 131 GVHVKLHNLIGRDMISALQHDEVDLAVGSTL----------DLPEDLSYRAIYTYDLRLI 180 Query: 184 LRKDHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 L HP L I + ++ V Q+ + + + +E Sbjct: 181 LPLGHPLAEKSELTLADLASGELILPPRHLTTWRLVNLVFQQHNIPYRVRLEVGGWEIIK 240 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQK 284 + +A++ + +L + +LP F + Sbjct: 241 RYVELGFGIGIASS----ICLSGSERLHVRSLPEVFPQRTYG 278 >UniRef50_A0AXF9 Transcriptional regulator, LysR family n=9 Tax=Burkholderia cepacia complex RepID=A0AXF9_BURCH Length = 329 Score = 138 bits (348), Expect = 3e-31, Method: Composition-based stats. Identities = 47/289 (16%), Positives = 92/289 (31%), Gaps = 11/289 (3%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 + L L + + R++ AA+ + VT AVS + +L PL V S G++ T Sbjct: 25 MKLKQLDAFLAVAEHRTIRGAARALGVTQPAVSGIVRELEHELGVPLVVRSVKGIALTDY 84 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQT-PRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + ++ D+ +A + + +L + P A Sbjct: 85 GSAFAIRARLIVEEIQRTRDEIEQLRLGTTGSVSIAVSPTVALTILPRAFAAFTRDLPGA 144 Query: 127 TIKLRN-WDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 T+ + + L + G +D + + S+ P LF V R Sbjct: 145 TLNVDDALTATDLARLRDGSLDFIVTHQLSNALPD------PDEFASIPLFRTAFAVVAR 198 Query: 186 KDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRE-RTIAMSLPEFEQSLFM 244 H +L + + + + ++ G + + P F +L + Sbjct: 199 SRHRLARAR-SLRELVDAHWCVPRYGEGGDDLIRSIFMPFGLDVPKRVVHCPSFAATLGL 257 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLL 293 +Q D L + P + Q + + L P + LL Sbjct: 258 VSQTDALGVFARP-LAEVERQSRGIVALNLAEPMPALTVAIVMRRHALL 305 >UniRef50_C1DGS2 Transcriptinal regulator, LysR family n=1 Tax=Azotobacter vinelandii DJ RepID=C1DGS2_AZOVD Length = 301 Score = 138 bits (348), Expect = 3e-31, Method: Composition-based stats. Identities = 52/299 (17%), Positives = 105/299 (35%), Gaps = 28/299 (9%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L L + KAA+ +++T +S+ ++ L A LF + T Sbjct: 2 IELRQLRYFMALAEHLHFGKAAESLHITQPPLSRQISALEADLGVVLFSRHSRSVELTAA 61 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRGL-KFELAAESPLMMIMLNALSKQIYQRYPQA 126 +Q+ + +L + + ++ I+L L K YP Sbjct: 62 GRDFQQHAKTALAELDLAIRSTRASARGERGELRVSFTMVAAWILLPELLKAYSDAYPDV 121 Query: 127 TIKLRN-WDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 ++ L D A+ RGE DI + SS ++ Y L + C L Sbjct: 122 SLALNEVLPRDLGPALERGEADIALTFP----------SSGSKSLCYRALRREPLCAVLP 171 Query: 186 KDHPALHQ-TWNLDTFLRYPHISICWEQSDTWALDNVL---QELGRERTIAMSLPEFEQS 241 HP +++ P I+ Q+ + V+ + G E I + + Sbjct: 172 ASHPLAAATEFSIAALADEPFITF-PRQTAPALHEAVMSCCRRAGFEPKIRLETHLQQTI 230 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 + + A+ L ++ P + +P ++ + V + ++W+ RN + Sbjct: 231 VNLVAE--GLGVSVVPGSMRKMR---------MPGVAFKAIDRSPPVEYGVIWNPRNEN 278 >UniRef50_D0I933 Putative transcriptional regulatory protein LysR-family n=1 Tax=Grimontia hollisae CIP 101886 RepID=D0I933_VIBHO Length = 307 Score = 138 bits (348), Expect = 3e-31, Method: Composition-based stats. Identities = 45/305 (14%), Positives = 96/305 (31%), Gaps = 19/305 (6%) Query: 10 LNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMV 69 + + V++AA ++V+ SA++ ++ +L + LFV P G+ T Sbjct: 5 MKQIRYFIATADSGQVSQAANAMHVSQSAITTAVKQLEEMLNVSLFVRQPHGMLLTYEGN 64 Query: 70 SMEQNLAEWMQMSNLL-LDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQATI 128 Q+ ++ L LA L + + + YP + Sbjct: 65 QFYQHATHIVKELEEAMLLSHRRANQVSGTITLAMSYTLAGYFVPPYLTRFQRSYPNVNV 124 Query: 129 KLRNWDYDSLDA-ITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKD 187 KL +++ + GE D+ F + I ++ L S +WL Sbjct: 125 KLVEATRSNIEEGVVSGEFDVAFMLTSNLLNQ--------EDISFQTLLSSQRRLWLSSS 176 Query: 188 HPALHQTW-NLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAA 246 HP L + L +YP+I + + + + + E + A Sbjct: 177 HPLLERKMVTLHDVAQYPYIMLTVD-EASNTAQRYWNQTPYQPNTVFRTTSVESVRSLVA 235 Query: 247 QPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVW 306 ++ + L + PL + ++W ++ + + Sbjct: 236 --NDYGITILSDMVYRPWSLEGRRVEVRPLA-----DHVPAMDVGVVWSRKRERSSAVKA 288 Query: 307 LRETI 311 E + Sbjct: 289 FCEFM 293 >UniRef50_O67145 Transcriptional regulator (LysR family) n=2 Tax=Aquificaceae RepID=O67145_AQUAE Length = 306 Score = 138 bits (348), Expect = 3e-31, Method: Composition-based stats. Identities = 40/241 (16%), Positives = 83/241 (34%), Gaps = 22/241 (9%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 + +DL L+ + + +SVTKA+ +N++ S +S + L LF L P Sbjct: 10 MKDIDLKLIEIFCYVYEYKSVTKASSELNMSQSTISFHMKNLETQLGQKLFYRKGKTLIP 69 Query: 65 TPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNALSKQIYQR- 122 T + + E +L+ + + + A S +L L + + Sbjct: 70 TAFADKLYEYATELTNFKRRMLEDITKFSGKNGGVIRIGASSIPGNYLLPQLLGEFIENF 129 Query: 123 --YPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 Y +++ + D + + G+VD+G G + + ++D Sbjct: 130 KGYVNVELRVSD-SQDIYEKVINGDVDLGIIGYLPRTNKVDAI----------KFYTDRI 178 Query: 181 CVWLRKDHPALHQTW-NLDTFLRYPHISICWEQSDTWALDNVLQELGR---ERTIAMSLP 236 + +P L L+ + P + +++ L+E G E I Sbjct: 179 LIV---GNPELEDKVYTLEELINLPLVIREVGSGTRSIVEDKLREKGLSLKEMNIVAVCN 235 Query: 237 E 237 Sbjct: 236 S 236 >UniRef50_D0J615 Transcriptional regulator, LysR family n=2 Tax=Comamonas testosteroni RepID=D0J615_COMTE Length = 306 Score = 137 bits (347), Expect = 4e-31, Method: Composition-based stats. Identities = 56/320 (17%), Positives = 109/320 (34%), Gaps = 27/320 (8%) Query: 8 LDLNL----LLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLS 63 +D NL L + L Q +S +AA ++++ SA+S +A++ A LF + + Sbjct: 2 VDANLSTKDLRAVVALSQTKSFGQAALLVHLSQSALSALIARVEAQIGARLFERTTRAVE 61 Query: 64 PTPLMVSMEQNLAEWMQMSNLLLDKPHH-QTPRGLKFELAAESPLMMIMLNALSKQIYQR 122 T + E ++ + L R +AA L +L + + + Sbjct: 62 LTDAGHVFIAHAQEILRDTQRALRAVTDTVQLRTGSVTVAALPSLAASLLPKVFAEFTRI 121 Query: 123 YPQATIKLRN-WDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPC 181 +P + L + + D + G+VD + + + YE L D Sbjct: 122 HPGVRLSLLDTLSGPAFDLVRDGKVDFALTAADPKQE----------DLAYEQLMEDQFF 171 Query: 182 VWLRKDHPALH--QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFE 239 + DHP ++ L YPH+S+ S +D L G + Sbjct: 172 LICPDDHPLSKHAGPVAIENTLDYPHVSMPSSASVRQYIDADLHSKGLYFAPVFEVDHIA 231 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 + L ++ P Q +L + L P ++ P ++ + Sbjct: 232 TIGALV--SAGLGISALPETAVSLLQAGRLVQIPLSPP-------GIQRPLGMVMRRHAP 282 Query: 300 HNPKIVWLRETIKNLYASMA 319 + L I+ ++A Sbjct: 283 RSSAAKALEALIRASLHNLA 302 >UniRef50_B9JE08 Transcriptional regulator protein n=11 Tax=Rhizobiales RepID=B9JE08_AGRRK Length = 312 Score = 137 bits (347), Expect = 4e-31, Method: Composition-based stats. Identities = 45/300 (15%), Positives = 88/300 (29%), Gaps = 20/300 (6%) Query: 11 NLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVS 70 LL + + +S T+AA+ +++ S+VS + L A LF S GL T + Sbjct: 4 RLLKTFLAVARSKSFTRAAEEVHLAQSSVSDQMQSLEAELGAALFTRSKQGLELTQAGET 63 Query: 71 MEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNALSKQIYQRYPQATIK 129 + E + +++ + A + + L A +P ++ Sbjct: 64 LVSYAEELLALADEARAAVAASAGHEAGSVTIGALETIAAVKLPAWLSAFQNDHPDIGLR 123 Query: 130 L-RNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDH 188 L D L + E+D+ F + L + ++ + Sbjct: 124 LKVAGSGDLLRKLEASEIDLAFCFDQ---------GRLDERFVSRAIATEPLILATSPAV 174 Query: 189 PALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGR-ERTIAMSLPEFEQSLFMAAQ 247 +L ++ + D E G A + + A Sbjct: 175 KFAAGKLDLAELAAMDFLTTEVGCAYRSMFDTAFAEAGIVAPKPAAEVGSIGAIARLVAA 234 Query: 248 PDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWL 307 + PR + LP P V ++W +R P + +L Sbjct: 235 --GAGIGLVPRLAVAEALDRG-EISELPWPGPTQV-----VSLVMIWRRRRVQPPVLRFL 286 >UniRef50_UPI0001788193 transcriptional regulator, LysR family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001788193 Length = 295 Score = 137 bits (347), Expect = 4e-31, Method: Composition-based stats. Identities = 47/286 (16%), Positives = 91/286 (31%), Gaps = 28/286 (9%) Query: 14 LCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSMEQ 73 + S+++AA +++T AVS ++ L PLF + G+ T + + Sbjct: 10 RVFYWTARLGSLSRAADHLHITQPAVSHTVKHLEETIGGPLFFRTTKGVKLTSEGDVLFR 69 Query: 74 NLAEWMQMS---NLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQATIKL 130 + + + + H+ + + A L L + + YP I++ Sbjct: 70 YIEQAFGLIEIGEKAIADMHNL--HSGEINIGASDTLCKYYLLPHLEYFHAAYPDIRIRI 127 Query: 131 RN-WDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL----- 184 N ++L + G++D G + + + S P+ + Sbjct: 128 TNRTTPETLSLLKEGKIDFGIVHLPASDKQIDFRPSSPIHD-----------CLVAGRSY 176 Query: 185 --RKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 R P +L YP + + S +D + G + L E + Sbjct: 177 AERAGLP---NPLSLHDIGNYPLLMLETGGSTRMYVDQYAELQGVKLKPEFELGSIELLV 233 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEV 288 A+ L Y + Q QL V L P E + Sbjct: 234 QF-ARSGFGLAFVIRDYAKDEMQTGQLIEVPLDPPIPERSIGIATL 278 >UniRef50_Q5WL22 LysR family transcriptional regulator n=2 Tax=Bacillus RepID=Q5WL22_BACSK Length = 297 Score = 137 bits (347), Expect = 4e-31, Method: Composition-based stats. Identities = 53/308 (17%), Positives = 113/308 (36%), Gaps = 29/308 (9%) Query: 14 LCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSMEQ 73 + L++ S T+ ++N+T S++S +++KL F+ L + + ++ T + + Sbjct: 8 KAFRTLIETGSFTETGIKLNLTQSSISHAISKLEDEFELTLIIRNRSNINLTNEGKLVYE 67 Query: 74 NLAEWMQMSNLLLDKPHHQTP-RGLKFELAAESPLMMIMLNALSKQIYQRYPQATIKLRN 132 + +Q LL + + +I+L + + + YPQ I+L Sbjct: 68 QIVNILQQHEQLLTTISTSKNIISGVLRIGTLPSVSLILLPKVLAYVEEHYPQLDIQLFE 127 Query: 133 WDYDSLDA-ITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPAL 191 +YD ++ + ++D+GF R +E F D L KDHP Sbjct: 128 GNYDQVEEWLETDQIDVGFLVRPHAS-----------GFVFEQTFKDNLVCILSKDHPLA 176 Query: 192 HQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQPDN 250 + N++ I + + +L E + I + + L M +N Sbjct: 177 EEVDLNINQLKNERWIM--PNKQIDRDVARILSENNIKPNIVYEIAVDQVILAMV--SEN 232 Query: 251 LLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEV-PFTLLWHKRNSHNPKIVWLRE 309 L ++ P L+ LP + + + + R +P + + Sbjct: 233 LGISITPSSL----------LIHLPNNLIQKNFNTPYIREVGIAYKHRVHSSPITLKFID 282 Query: 310 TIKNLYAS 317 +K + +S Sbjct: 283 IVKQIASS 290 >UniRef50_Q127N6 Transcriptional regulator, LysR family n=1 Tax=Polaromonas sp. JS666 RepID=Q127N6_POLSJ Length = 328 Score = 137 bits (347), Expect = 4e-31, Method: Composition-based stats. Identities = 47/271 (17%), Positives = 84/271 (30%), Gaps = 15/271 (5%) Query: 10 LNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMV 69 L L + + S T+AA +++T SA+S + +L + S + + + Sbjct: 5 LRQLRAFVAVAKSASFTEAAATLHITQSALSGLIKELEHVLGVQVVYRSTRKVQLSEVGG 64 Query: 70 SMEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQIYQRYPQATI 128 +Q + H +AA + ++ +YP I Sbjct: 65 EFLPLATRILQDLDEAYHAIHDLKALKSGVVRVAAPQLMACTLMPDAIAAFNSKYPAVQI 124 Query: 129 KLRNWDYDSLDA-ITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKD 187 +L + +++ + + GEVD + I LF D Sbjct: 125 RLSDCAVEAVQSKVHSGEVDFAIGPE----------REVSPEIATHSLFEIPFVAVFPPD 174 Query: 188 HPALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAA 246 HP + RYP IS+ E + + D + M + +L M Sbjct: 175 HPLGKLKRVTWTDISRYPLISLQGEYTQRLSADLQAASGNLTLSPGMEVTFMTTALSMV- 233 Query: 247 QPDNLLLATAPRYCQYYNQLHQLPLVALPLP 277 L + T Y L+ L L P Sbjct: 234 -SAGLGVTTCLPYATSLLNLYGLQTRLLQAP 263 >UniRef50_A8LT79 Transcriptional regulator n=1 Tax=Dinoroseobacter shibae DFL 12 RepID=A8LT79_DINSH Length = 304 Score = 137 bits (347), Expect = 4e-31, Method: Composition-based stats. Identities = 44/272 (16%), Positives = 90/272 (33%), Gaps = 16/272 (5%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L + L + +E S+T A++R+NV A+S+ L KL A PLF +P G+ PT Sbjct: 1 MELRQMQYLLAIYEEGSLTGASRRLNVVQPALSQQLQKLEAEIGQPLFTRAPKGMIPTQA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDK-PHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + ++ + + L+ P + S L ++ +YP Sbjct: 61 GIEAYEHFVRITRDLDTALNALSGDGGPVRGTVSIGVVSSAANNALGETLQKFTVKYPDV 120 Query: 127 TIKLR-NWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 ++K+ + + D + +D+ + ++ + + C+ Sbjct: 121 SVKVTGGYTGELQDQLRMSRIDLAIINMPPLKQDPRIVDIV----------KEDFCLIAA 170 Query: 186 KDHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 D P + L+ + +D G + +M E + Sbjct: 171 PDTPITGKAGLRLEDIETMKLVIPSQRHGLRTIIDRAANGEGLALSPSMEFDEMKLIEDF 230 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPL 276 D + P L A P+ Sbjct: 231 VCATDY--VTILPPIAVNRALRSG-RLKAYPI 259 >UniRef50_A9VF88 Transcriptional regulator, LysR family n=77 Tax=Bacillales RepID=A9VF88_BACWK Length = 305 Score = 137 bits (347), Expect = 4e-31, Method: Composition-based stats. Identities = 41/315 (13%), Positives = 101/315 (32%), Gaps = 22/315 (6%) Query: 7 TLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTP 66 +++L L + +E T+AA+++N++ ++S+ + L PLF +S T Sbjct: 8 SIELRQLEYFLAVSKELHFTRAAEKLNISQPSLSQQIRALEHEVGMPLFDRIGKKISLTE 67 Query: 67 LMVSMEQNLAEWMQMSNLLLDKPHHQTP-RGLKFELAAESPLMMIMLNALSKQIYQRYPQ 125 + + + + ++ +L ++YP Sbjct: 68 AGRVLLSHSKTIFHEVEQARSAIQDLNGLHHGSLTIGSLLTVVNYLLPPAILDFNKQYPN 127 Query: 126 ATIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 + + + + + + E+DIG + L I L+ + + Sbjct: 128 IELSVLGLRTGEIREKLLQNELDIGITF----------LPVQDKEIVSIPLYKSELTLVV 177 Query: 185 RKDHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 H + +++ YP I + T + + Q + + + E + Sbjct: 178 PTSHSLTERKYVSIEELQDYPLILLPKNFYLTELITSHCQNFNFKPKPILEISTMESLIQ 237 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 M AQ + + P+ + Q + + + P + L++ + Sbjct: 238 MVAQ--GMGITVLPKPYIDFLQNEHIQAIKIENPTPT-------IDIGLIYRRDKYMCAA 288 Query: 304 IVWLRETIKNLYASM 318 E +K S+ Sbjct: 289 TRKFIEQLKITVHSL 303 >UniRef50_D0J3K7 Transcriptional regulator, LysR family n=3 Tax=Comamonadaceae RepID=D0J3K7_COMTE Length = 315 Score = 137 bits (347), Expect = 4e-31, Method: Composition-based stats. Identities = 48/276 (17%), Positives = 97/276 (35%), Gaps = 23/276 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L + ++ +V++AA+++ + +S+ L +L LF P G+ T Sbjct: 1 MELRHLRYFVAVAEQGNVSRAARKLFIAQPPLSQQLKQLEDEVGTQLFTRLPRGMQLTAA 60 Query: 68 MVSMEQNLAEWMQMSNLL-LDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 S+ ++ + + L + L M +L L + + + + Sbjct: 61 GESLLEDARVILARAEQAPLRARERERSSQTVLRLGLVPSAMQSLLPGLLRAVAKAGWEV 120 Query: 127 TIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 I+ R A+ +GE+++GF+ L+S+ D C+ + Sbjct: 121 QIEAREMISSQQQRALRQGELELGFARPGHREADELELASI----------DDPYCLAVP 170 Query: 186 KDHPALHQT--WNLDTFLRYPHISICWEQSDTWALDN---VLQELGRERTIAMSLPEFEQ 240 HP + +L + P + DT D + E G I + Sbjct: 171 SSHPLAGGSGMLDLQAAVHQPFVGFT-RYQDTDYFDRTVALCAEAGFTPLIRHEAGQLVN 229 Query: 241 SLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPL 276 + A L +A P + H+ +V PL Sbjct: 230 VPALVAC--GLGVAIVP---ASFAMFHREQIVFRPL 260 >UniRef50_Q28M96 Transcriptional regulator, LysR family n=3 Tax=Rhodobacteraceae RepID=Q28M96_JANSC Length = 297 Score = 137 bits (346), Expect = 5e-31, Method: Composition-based stats. Identities = 51/315 (16%), Positives = 106/315 (33%), Gaps = 31/315 (9%) Query: 9 DLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLM 68 DL + +E +AA R+ + A+S+++ L A D LFV + + T Sbjct: 4 DLRQIRYFVATAEELHFRRAADRLGIAQPALSRAIQALEAELDVALFVRTNRSVQITTAG 63 Query: 69 VSMEQNLAEWMQMSNLLLDKPHHQ-TPRGLKFELAAESPLMMIMLNALSKQIYQRYPQAT 127 E + ++ +L++ R + + L +L K +R+P+ T Sbjct: 64 RVFLDGAREILTLTERMLEETRTAHDGRMGALRIGYTDFAIAGELPSLLKHFQERHPRVT 123 Query: 128 IKLRN-WDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRK 186 +K ++ + + G++D+GF + D V+ S+ + Sbjct: 124 LKPQHGVTQTQIRLLEEGKLDLGFVTGPI----------VRDGFDQRVVQSEALQAVVPD 173 Query: 187 DHPALHQ-TWNLDTFLRYPHISICWEQSDTWALDNVL---QELGRERTIAMSLPEFEQSL 242 HP + T ++ + D +L + G I L Sbjct: 174 SHPFAGRATLSIADLAEEDFVHGSSR-DWQHFYDYLLPMCRRAGFSPRIVQEAFNTAGIL 232 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 + + + + T + LVA+P+ + + +W K + P Sbjct: 233 GLVSCGMGVTVLT-----ERVCSALGPGLVAIPI-----TDADERLVTSAIWRKDHLSGP 282 Query: 303 KIVWLRETIKNLYAS 317 R +++L A Sbjct: 283 A----RHFVEDLCAR 293 >UniRef50_A8GI93 Transcriptional regulator, LysR family n=3 Tax=Enterobacteriaceae RepID=A8GI93_SERP5 Length = 292 Score = 137 bits (346), Expect = 5e-31, Method: Composition-based stats. Identities = 47/271 (17%), Positives = 91/271 (33%), Gaps = 11/271 (4%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L + + +E+S T+AA+R + SA+S +AKL LF + + T Sbjct: 1 MNLKQIRFALAVAEEQSFTRAAQRCHTVQSALSHQIAKLEEELGCTLFERTSRRVRLTTA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQT-PRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + Q + L+++ + + S + I L ++ YP Sbjct: 61 GQAFIQPAQRLLAAKQALVEEVVAASGTVSGTLTIGTISTINAIDLTEKLGNFHRHYPAV 120 Query: 127 TIKL-RNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 I+L L+ + + + D+ F G +S + L + + Sbjct: 121 NIRLYVGMSEALLEDVRQQKTDVAFVGLWPGDIDMLPVS-------HRQLTDEPLVALVA 173 Query: 186 KDHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 HP Q NL T P + D Q G +R ++ + E + Sbjct: 174 TQHPLASRQRVNLQTLSEVPLVDFYSGTGARRQTDRAFQAAGIKRHVSFEIDHIEWLENL 233 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALP 275 + + Q + L +P+ P Sbjct: 234 VRRGLAAGIVPI-STAQRLSSLVSIPIEDGP 263 >UniRef50_Q1IRM1 Transcriptional regulator, LysR family n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1IRM1_ACIBL Length = 302 Score = 137 bits (346), Expect = 5e-31, Method: Composition-based stats. Identities = 42/241 (17%), Positives = 91/241 (37%), Gaps = 14/241 (5%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +D + LL + + + ++A +++ + SAVS + +L + + LF S + +P Sbjct: 1 MDFDQLLTFLEVAKLGNFSRAGEKVYRSQSAVSAQIRQLEQEYGERLFDRSGKIVRLSPA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRGL-KFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + + + N L Q + A + +L + + Q++PQ Sbjct: 61 GEVLLEYAQRMVALRNESLRAVADQGETPRGVLSIGANEATCLYVLPDIFTEYCQQFPQV 120 Query: 127 TIKL-RNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 I + RN+ L A+ G +D+G + L ++ +F D + + Sbjct: 121 QITVYRNFSRKILQAVEDGVIDLGIAT----------LPVKSPSLKVHPIFRDRLELMVP 170 Query: 186 KDHPA-LHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 HP ++ ++ YP I + LD + + + +AM +P Sbjct: 171 VRHPLAAKESVTIEEIAEYPQIFPKTGYTRQ-QLDKLFRPYNSKLRVAMEIPSVGLIKSF 229 Query: 245 A 245 Sbjct: 230 V 230 >UniRef50_Q4ZY05 Regulatory protein, LysR:LysR, substrate-binding n=1 Tax=Pseudomonas syringae pv. syringae B728a RepID=Q4ZY05_PSEU2 Length = 298 Score = 137 bits (346), Expect = 5e-31, Method: Composition-based stats. Identities = 52/304 (17%), Positives = 102/304 (33%), Gaps = 22/304 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L ++++ S ++AA +++T S+VSK++ L PL T Sbjct: 1 MNLRTLRTFVEVVRQGSFSQAADVVSLTQSSVSKAVKTLEDELGTPLLSRIGHRSELTAA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + + N LL + + + + A+ Q RYP Sbjct: 61 GEIVYRRALTLLAERNDLLTELNDLRGLKGGVLRIGLPPVGSGALFAAMFTQYRARYPDI 120 Query: 127 TIKLRNWDYDSLDA-ITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 I+L L + GEV++ + ++S DY+ + + V + Sbjct: 121 DIQLTEHGASKLHECLASGEVELA---------ALLKMNSFSEEFDYQDVRIEPVVVVMA 171 Query: 186 KDHPALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 ++HP + ++ P I + + G + + + + + Sbjct: 172 ENHPLAKRKRVVIEDLAETPFILFEAGFALNTMIKLACDRKGVTPKVTARSGQVDFIVDL 231 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 L +A PR + + LVAL P + L W K +P Sbjct: 232 V--SAGLGVAFLPRMLAQKHYHDGIRLVALNEP-------DTDWHMVLAWRKNAHLSPAA 282 Query: 305 -VWL 307 WL Sbjct: 283 EAWL 286 >UniRef50_C4L1Y9 Transcriptional regulator, LysR family n=2 Tax=Exiguobacterium RepID=C4L1Y9_EXISA Length = 294 Score = 137 bits (346), Expect = 5e-31, Method: Composition-based stats. Identities = 35/270 (12%), Positives = 90/270 (33%), Gaps = 16/270 (5%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++ + + + +S T+AA+ ++VT +SK++ L LF + T + Sbjct: 1 MEFREMQYFIAVARAKSFTRAAEALHVTQPTLSKTIRHLEQELGVELFDRQRRQIELTDV 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRGL-KFELAAESPLMMIMLNALSKQIYQRYPQA 126 ++ ++ L + T L + + + YP Sbjct: 61 GEALMLESELLIRQLEDLPNHVFDITNSKRGLIRLGLPPLIGSLFFTKFLTVFHSSYPNI 120 Query: 127 TIKLRNWDYDSLD-AITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 +++ +L+ A+ +GE+D+ + + + ++ +L Sbjct: 121 RVEITEAGGHTLEHALEKGELDVIATVLPTSST-----------FEETPFVTEELYAYLP 169 Query: 186 KDHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 + HP + L+ P + E S + ++ G + +++ Sbjct: 170 ERHPLASRKQLLLEELASEPFVLFTDEFSLHHVVRTACEQAGFTPRLIGESGQWDFLCMS 229 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVAL 274 AQ + + PR ++ + + L Sbjct: 230 VAQGN--AVTILPRSIMQEMNIYGVKAILL 257 >UniRef50_B5EGJ2 Transcriptional regulator, LysR family n=5 Tax=Geobacter RepID=B5EGJ2_GEOBB Length = 300 Score = 137 bits (346), Expect = 5e-31, Method: Composition-based stats. Identities = 45/313 (14%), Positives = 94/313 (30%), Gaps = 25/313 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +D+ L + + ++ TKAA+ +++ AVS ++ KL + LF +S T Sbjct: 1 MDVRQLRYFIEVAKVKNFTKAAEALHIAQPAVSMAVKKLEQELELSLFNRQDKKVSLTAE 60 Query: 68 MVSMEQNLAEWMQMSNLL-LDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + L+ + + L + + + + YPQ Sbjct: 61 GEIFLPHAKRILDDLRAAELEMAELKGLSKGEVRLGIPPMISAYFFPDIIRDFKKSYPQL 120 Query: 127 TIKLRNWDYDSLD-AITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + + + I +GE+D+G + P ++ + + + Sbjct: 121 HLSVLGEGAWRIQKMIGQGELDMGVVAG----------GNFPETLEVRRFLREEIVICVP 170 Query: 186 KDHPALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 DHP ++ +L F+R P + VL+ G I F + Sbjct: 171 PDHPFAQRKSVSLVEFIREPLVFYKEGYYIREFFLEVLKGAGSAPNIVFETNLFSLVKSL 230 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 + LVA+P + + W K + Sbjct: 231 VRNGTGI------SIFLRMVVAADTDLVAVPFDPPL------HLDLLIAWKKDTYLSLAN 278 Query: 305 VWLRETIKNLYAS 317 + + A Sbjct: 279 RAFVDFLLQHAAE 291 >UniRef50_A3K7Z5 Regulatory protein, LysR:LysR, substrate-binding n=1 Tax=Sagittula stellata E-37 RepID=A3K7Z5_9RHOB Length = 333 Score = 137 bits (346), Expect = 5e-31, Method: Composition-based stats. Identities = 47/301 (15%), Positives = 101/301 (33%), Gaps = 25/301 (8%) Query: 4 SITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLS 63 ++ ++L L + +E + T+AA+++ + +S+ + L L S +S Sbjct: 25 NLPRIELRQLRYFLAVAEELNFTRAAEKMGIAQPPLSQQILVLEQQLRVKLLNRSRRHVS 84 Query: 64 PTPLMVSMEQNLAEWMQMSNLLLDKPHHQT-PRGLKFELAAESPLMMIMLNALSKQIYQR 122 TP + + + + + +AA + ++ L + + Sbjct: 85 LTPEGEAFILYARRIINNTQIAAELVGAIKRGEEGPLSVAAIFSSIYTVVPQLFEAFVAQ 144 Query: 123 YPQATIKLRNWD-YDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPC 181 +P+ L+ L A+ +D+G + I+ L + Sbjct: 145 HPRVRFHLQEMTIGQQLVALREERIDLGILRGPI----------IHPEIETHTLLEEPFV 194 Query: 182 VWLRKDHPALHQT-WNLDTFLRYPHISI--CWEQSDTWALDNVLQELGRERTIAMSLPEF 238 V + K HP QT D L P I + + + + +VL I + + Sbjct: 195 VVVSKKHPLAKQTILTADQVLSQPLIRVIPSVNRDYSHQMFSVLANRNTTPNIVHEVSDT 254 Query: 239 EQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRN 298 L + A + ++ P + +H L +PL ++ L W K + Sbjct: 255 HTLLGLVAA--GMGISMVPASVR---SIHTDQLRYIPL-----REGTPTSTIQLAWLKDS 304 Query: 299 S 299 Sbjct: 305 D 305 >UniRef50_A1BA89 Transcriptional regulator, LysR family n=4 Tax=Alphaproteobacteria RepID=A1BA89_PARDP Length = 324 Score = 137 bits (346), Expect = 5e-31, Method: Composition-based stats. Identities = 50/314 (15%), Positives = 98/314 (31%), Gaps = 26/314 (8%) Query: 6 TTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPT 65 + + L L + + + VT+AA+ +N+T SAVS +++ L A F + T Sbjct: 23 SGMTLEQLRIFLAVAERQHVTRAAEALNLTQSAVSAAVSALEARHGVRFFDRVGRRIVLT 82 Query: 66 PLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGL-KFELAAESPLMMIMLNALSKQIYQRYP 124 + + + + + A + L + + +P Sbjct: 83 ETGEAFMAEARAVLDRVETAEMVLEDLSREPRGRLRVHASQTVASYWLPPRLVALREMHP 142 Query: 125 QATIKL-RNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVW 183 ++L + + DA+ G D+G + + +V+ D + Sbjct: 143 GIELRLTVSNTTHAADAVQDGGADLGL----------VEGAVAHGGLHRQVVARDRLVLV 192 Query: 184 LRKDHPALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRE---RTIAMSLPEFE 239 + DHP + I + L G +++ LP E Sbjct: 193 MATDHPWAGVEAMPQAGLEAQNWILREPGSGTRSEFETWLAGRGLSIAALPLSLELPSNE 252 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 L A L + + + LPLP E PF+LL + R Sbjct: 253 AVLNAVAASQCLAALSQRAVARPAAAGW---IRTLPLP-------GAERPFSLLTNPRRY 302 Query: 300 HNPKIVWLRETIKN 313 + L + + + Sbjct: 303 RTRAVQALIDILTD 316 >UniRef50_B1M0B1 Transcriptional regulator, LysR family n=24 Tax=Proteobacteria RepID=B1M0B1_METRJ Length = 308 Score = 137 bits (346), Expect = 5e-31, Method: Composition-based stats. Identities = 48/276 (17%), Positives = 92/276 (33%), Gaps = 17/276 (6%) Query: 8 LDLNL--LLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPT 65 +DLNL + ++Q S T+AA +N++ A++ + +L D L + ++PT Sbjct: 1 MDLNLRQVRAFVSVVQAGSFTRAAALLNLSQPALTVQIRRLEETLDARLLDRTSRTVAPT 60 Query: 66 PLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNALSKQIYQRYP 124 L + ++ + ++ R +A +L+ + +P Sbjct: 61 RLGRDLLPVFQRVLRDLDAVVVDTRDLAARRHGVVRVATLPSFAASVLSDAIVRFRAEHP 120 Query: 125 QATIKLRNWDYDSLDAITRG-EVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVW 183 T ++++ + + RG E D+G G + +L D V Sbjct: 121 AVTFRIKDVIAQRVLDLVRGEEADLGIVGGDVRDPEIGVLHRT----------RDALHVI 170 Query: 184 LRKDHPALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 DHP + +P I + S +D GR +A ++ Sbjct: 171 YPADHPIGALPRVTIAALAEHPLILMDPATSVRAVVDRAFIGSGRLPRVACEATYMMTAV 230 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPF 278 M L L P + L A+ P Sbjct: 231 SMVRA--GLGLTILPGAAREIRAEPLLRSRAIDDPL 264 >UniRef50_B9JGZ8 Transcriptional regulator (Activator) protein n=3 Tax=Rhizobiales RepID=B9JGZ8_AGRRK Length = 400 Score = 137 bits (346), Expect = 6e-31, Method: Composition-based stats. Identities = 49/271 (18%), Positives = 90/271 (33%), Gaps = 14/271 (5%) Query: 12 LLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSM 71 L L + + + T AA+R+ + V +++ +L PLF + G+ T ++ Sbjct: 106 QLQALIAVREMENFTLAARRLGLAQPTVHRAVTQLEQEAARPLFERTSYGIVATRTAQTL 165 Query: 72 EQNLAEWMQMSNLL-LDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQATIKL 130 Q + D + + + A +L P+ I++ Sbjct: 166 AQAARLAFAELSQAEADLAETVSEEAGRIVIGAMPLSRSYVLPQAIANFRTLRPKIPIQV 225 Query: 131 RNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHP 189 Y D L + RGE+D ++ + VLF+D + +DHP Sbjct: 226 VEGPYADLLAGLRRGEIDFLIGALRDPAPIGDV--------EQRVLFTDTLVLVAGRDHP 277 Query: 190 ALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQP 248 + L+ YP + D + LGR + + + Sbjct: 278 LIGKDNIALEELASYPWVVGLSGTPIRKHFDAMFDSLGRRPASIVESGSLILMRELLDRT 337 Query: 249 DNLLLATAPRYCQYYNQLHQLPLVALPLPFD 279 D+L Y Q +L + + ALP D Sbjct: 338 DHLGCI---SYLQAEAELTRGLIKALPYNLD 365 Score = 67.0 bits (163), Expect = 9e-10, Method: Composition-based stats. Identities = 18/80 (22%), Positives = 35/80 (43%) Query: 9 DLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLM 68 +L L +++ SVTKAA+ +V+ AV+++L+K+ LF + GL Sbjct: 14 NLRHLRVFLMVVDTASVTKAAELCHVSQPAVTQALSKIERGVGMALFTRTAQGLFVNKQG 73 Query: 69 VSMEQNLAEWMQMSNLLLDK 88 + + + + L Sbjct: 74 EVLAKRVRRAFGYLDPALSD 93 >UniRef50_B8IW67 Transcriptional regulator, LysR family n=1 Tax=Methylobacterium nodulans ORS 2060 RepID=B8IW67_METNO Length = 316 Score = 137 bits (345), Expect = 6e-31, Method: Composition-based stats. Identities = 36/255 (14%), Positives = 82/255 (32%), Gaps = 17/255 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +D L +++ S++KA++ + V A+S+ LAKL PL S G++PT Sbjct: 1 MDFRQLRYFAQIVESGSLSKASRNLYVAQPALSQQLAKLEDEVGKPLLHRSTRGVTPTEN 60 Query: 68 MVSMEQNLAEWMQMSNLLLD-KPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 +++ + ++ + L + + ++ + L ++I +YP Sbjct: 61 GLALYHHARFMLRQLDQALSIARQESGQIEGMVSIGLPATTVLAIGTPLVRRIRTKYPGI 120 Query: 127 TIKLRN-WDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + + I ++D+ S + + VL + V L Sbjct: 121 MLNVVEGMSGHLTHMIRLCQLDLAILFN----------SDVASDLPSTVLLDEELFVILP 170 Query: 186 KDHPAL---HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 + P + + + P I + +E + + + Sbjct: 171 SNSPLVPHDRTSITIAEAAALPLILPTGTHGLRRRISAEFEERNLTAHVVAEIDSLSLVM 230 Query: 243 FMAAQPDNLLLATAP 257 D + P Sbjct: 231 SCVY--DGIGATIKP 243 >UniRef50_Q47TZ7 Putative LysR-family transcriptional regulator n=1 Tax=Thermobifida fusca YX RepID=Q47TZ7_THEFY Length = 305 Score = 137 bits (345), Expect = 6e-31, Method: Composition-based stats. Identities = 52/271 (19%), Positives = 97/271 (35%), Gaps = 12/271 (4%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 LDL L L + + S++ AA+ ++ T AVS +A+L A PL V G+ T Sbjct: 2 LDLTRLRVLCEVARLGSMSAAARALSYTQPAVSHHIARLEAEVGTPLVVRHGRGVRLTEA 61 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTP-RGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + + + ++ R + LAA ++ + +R P Sbjct: 62 GRVLVGHAEAVLARLDTAEEEVAAIAGLRAGRVSLAAFPTATAGIVPQALATLRERAPDV 121 Query: 127 TIKLRNWD-YDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + L + +SLD + GEVD+ + I L + + L Sbjct: 122 AVTLVEAEPPESLDLLREGEVDVTLAFSYDETP-----PDASTGIREVTLCREQVRLLLP 176 Query: 186 KDHPALHQ-TWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 DHP + T L + ++ + L +V + G E IA + + + Sbjct: 177 GDHPLAAEHTLELAALRKETWVA--GCERCRSHLVHVCRRAGFEPRIAYTTDDHLAVQRL 234 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALP 275 + + P+ +Q + +V P Sbjct: 235 V--SLGMAVGVLPQLALLLHQGENVAVVDSP 263 >UniRef50_P20668 HTH-type transcriptional regulator gltC n=17 Tax=Bacillales RepID=GLTC_BACSU Length = 300 Score = 137 bits (345), Expect = 6e-31, Method: Composition-based stats. Identities = 39/276 (14%), Positives = 96/276 (34%), Gaps = 16/276 (5%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L + + V++AA ++V SA+S+ +A L + LF + TP+ Sbjct: 1 MELRQLRYFMEVAEREHVSEAADHLHVAQSAISRQIANLEEELNVTLFEREGRNIKLTPI 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHH-QTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 ++ M+ + ++ P ++ + L +L + + YP Sbjct: 61 GKEFLIHVKTAMKAIDYAKEQIDEYLDPHRGTVKIGFPTSLASQLLPTVISAFKEEYPHV 120 Query: 127 TIKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 LR Y ++A+ ++D+ + + I ++LF++ + Sbjct: 121 EFLLRQGSYKFLIEAVRNRDIDLAL---------LGPVPTNFSDITGKILFTEKIYALVP 171 Query: 186 KDHPALHQ-TWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 +HP Q T +L + + ++ G ++ + + + Sbjct: 172 LNHPLAKQKTVHLIDLRNDQFVLFPEGFVLREMAIDTCKQAGFAPLVSTEGEDLDAIKGL 231 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDE 280 + + P + + V +P+ F + Sbjct: 232 V--SAGMGVTLLPE--STFAETTPRFTVKIPIEFPQ 263 >UniRef50_A6CZZ4 Putative transcription regulator protein n=2 Tax=Vibrio RepID=A6CZZ4_9VIBR Length = 306 Score = 137 bits (345), Expect = 6e-31, Method: Composition-based stats. Identities = 53/296 (17%), Positives = 110/296 (37%), Gaps = 30/296 (10%) Query: 9 DLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLM 68 +L LL L + +S+++A +++ T S+VSK ++KLR DDPLFV S + PT + Sbjct: 6 NLQLLYTLLEVYYTQSLSEAGRKLGKTTSSVSKDISKLREQLDDPLFVRSNNRMLPTEYV 65 Query: 69 VSMEQNLAEWMQMSNLLLDKPHHQTPRGLK--FELAAESPLMMIMLNALSKQIYQRYPQA 126 ++ + + + L + + + ++A LM + + +S Q+ +++P A Sbjct: 66 KNIAPEIEQMLSDIRHTLTSRNTISNENYRKPIKVAITHILMELYGDEISLQLSKQFPSA 125 Query: 127 TIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRK 186 I+L WD + + ++D G L P I Y+ + + V Sbjct: 126 KIELMTWDSQTNQHLQDEKIDFGI---------HLNLVYHPGKIRYKRITATKLVVIC-- 174 Query: 187 DHPALHQTWNLDTFLRYP---HISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 P L+ + + + ++ ++ G + + ++ Sbjct: 175 --PQEDTNKPLEQLSQEREFMFLRLKDWNDVESNFFDIAEKNGIPIKHSFVVDNLSTAMK 232 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 + Q L P+ Y + P Q + L H + + Sbjct: 233 LVNQ--QKLCFIVPKIIADYYRS----------PHILWQLPTRGIIIGLYHHAQQN 276 >UniRef50_D2BU12 Transcriptional regulator, LysR family n=13 Tax=Enterobacteriaceae RepID=D2BU12_DICD5 Length = 316 Score = 137 bits (345), Expect = 7e-31, Method: Composition-based stats. Identities = 45/264 (17%), Positives = 90/264 (34%), Gaps = 12/264 (4%) Query: 13 LLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSME 72 + + S++ A++++ V SA+S+ + KL PLF G+ T +E Sbjct: 6 IRYFLAVANTGSLSAASQQLFVAVSAISRQIHKLEERIGAPLFERHARGMVLTDAGQILE 65 Query: 73 QNLAEWMQMSNLLLDKPHHQTPRGLKF-ELAAESPLMMIMLNALSKQIYQRYPQATIKL- 130 ++ + M + + F +A + +L L + + P T L Sbjct: 66 NHVRKSMMDMEYAIAEIQGLKAVRRTFVRVACTDGMAFDLLPGLFARFRRDNPAVTFFLQ 125 Query: 131 RNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPA 190 + + GE D+ S R E+++S P + +R DHP Sbjct: 126 VGSAIQVSEMVRNGECDVALQFSLSPDRGVEVMASYPA----------PVLLLMRPDHPL 175 Query: 191 LHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQPDN 250 +++ L +P + + D + G +S F + Q + Sbjct: 176 ANKSIQLPDLHGFPLVLPQQGTTIRQLFDLSCRMSGTFLEPTLSCNNFSALYYFMQQTPD 235 Query: 251 LLLATAPRYCQYYNQLHQLPLVAL 274 + A + Y + L L + Sbjct: 236 AVTACSHFSVLYRAREDGLLLKPV 259 >UniRef50_D2TGJ2 Putative LysR-family transcriptional regulator n=1 Tax=Citrobacter rodentium ICC168 RepID=D2TGJ2_CITRO Length = 310 Score = 137 bits (345), Expect = 7e-31, Method: Composition-based stats. Identities = 63/314 (20%), Positives = 111/314 (35%), Gaps = 41/314 (13%) Query: 1 MKKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPL 60 MKK D NL+ L ++ +VTKA+KR+ VTP+AVS +L +L+ ++++ LFV Sbjct: 1 MKK---EFDYNLIKVLDAVISAGNVTKASKRLAVTPAAVSIALTRLQGFYNEALFVRGRS 57 Query: 61 GLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALS-KQI 119 GL PT + + + + + + L L R K + L+ L ++ Sbjct: 58 GLIPTMKALEIHERFCQAIDLIKLTLTPQKQSAERN-KITILGGDITENYYLSQLYDDKL 116 Query: 120 YQRYPQATIKLRNWDYDSLD------AITRGEVDIGFSGRESHPRSRELLSSLPLAIDYE 173 ++ R++ + D + E DI S + E Sbjct: 117 FE-----RFTFRHFSNRNRDGEEMKRLLIMEECDIAISPTLVNDNDFECKPIDNFK---- 167 Query: 174 VLFSDVPCVWLRKDH-PALHQTWNLDTFLRYPHISICWEQSDTWAL-DNVLQELG---RE 228 CV KD+ + +L F H + DN L +E Sbjct: 168 -----HFCVICGKDNLLSELSQLSLHNFFSAHHAVFKANDYTAVTIKDNNLYNNNADYKE 222 Query: 229 RTIA-MSLPEFEQSLFMAAQPDNLLLATAPRYCQYY---NQLHQLPLVALPLPFDESQQK 284 R I + + + L+A P + + + + ++ P + Sbjct: 223 RRIVGYKSDSLTGLISIVERT--QLVALMPLKVATFFKNQRKYNINILQPP-----REML 275 Query: 285 KLEVPFTLLWHKRN 298 + WHKRN Sbjct: 276 IKPINVYAYWHKRN 289 >UniRef50_Q1GMF7 Transcriptional regulator, LysR family n=1 Tax=Ruegeria sp. TM1040 RepID=Q1GMF7_SILST Length = 295 Score = 136 bits (344), Expect = 9e-31, Method: Composition-based stats. Identities = 37/296 (12%), Positives = 80/296 (27%), Gaps = 27/296 (9%) Query: 12 LLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSM 71 L L + +S T A+R+ ++ AVS +L L + LF + TP+ + Sbjct: 5 QLEIFVALSEAQSFTLTARRLGISQPAVSHALKSLETALNVSLFDRQGSQIVLTPIGAQL 64 Query: 72 EQNLAEWMQMSNLLLDKPHHQTP-RGLKFELAAESPLMMI-MLNALSKQIYQRYPQATIK 129 + E + +S + + + + + +L L ++ YP + Sbjct: 65 LERAREILGLSRTMQQEAASFRGLDTGSLRIGSFGATSSLQLLPDLMSAFHRAYPGIDVF 124 Query: 130 LRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDH 188 + D + + +D+GF + + +D + + Sbjct: 125 IEEAADDIIVKWLEERRIDMGFVVLP------------DDRFETIPIATDQFVALVPRQS 172 Query: 189 PALHQ-TWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQ 247 Q L P I E + + G + +L M + Sbjct: 173 ALAKQERVTLSDLCNDPFIM--PESGSVKIVSALFAAAGLTPQTRYRTSQLLSTLSMVGR 230 Query: 248 PDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 ++ ++ L H +P Sbjct: 231 --GQGVSVVAEMAVPAAHPDNPWVIR-------PLSPAHPRMIGLALHPTAVRSPA 277 >UniRef50_A8FQL0 Transcriptional regulator, LysR family n=5 Tax=Shewanella RepID=A8FQL0_SHESH Length = 321 Score = 136 bits (344), Expect = 9e-31, Method: Composition-based stats. Identities = 55/321 (17%), Positives = 114/321 (35%), Gaps = 14/321 (4%) Query: 4 SITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLS 63 S + LDL + L L +++SVTK + ++N++ VS+ L R + LF+ GL Sbjct: 5 SFSNLDLLSINILVNLYEKKSVTKVSIKLNISAPKVSRCLKHTREVLGNELFIRKKHGLI 64 Query: 64 PTPLMVSMEQNLAEWM---QMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIY 120 P + + + + + FE++A + L I+ Sbjct: 65 PNEFADKVYPVAKKILVCCSELQKINCGVTNDDLC--HFEISAPDIISFPFPKLLLSMIH 122 Query: 121 QRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFS-DV 179 + + W S+D + G+ D G + S +++ S + L D Sbjct: 123 SEKENISFNISQWGRSSIDDVISGKTDFGICSSD----SDDVVGSSDKNLISIPLAKLDS 178 Query: 180 PCVWLRKDHPALHQTWNLDTFLRYPHISICWEQ--SDTWALDNVLQELGRERTIAMSLPE 237 + +HP L + NL++ YP++ ++ + + + + Sbjct: 179 LYLICDHNHPLLKKNINLNSIANYPYVDCNIGSIVQSRSQFQEYCKQNTMQLDVEVEVCG 238 Query: 238 FEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVAL-PLPFDESQQKKLEVPFTLLWHK 296 + + + L N + L + + L+++ Sbjct: 239 AYSLFDCLRERNAVTLLPFSSIYNVINSMPDFHACRLSKVEVEHFYTNLSIPTLYLVYN- 297 Query: 297 RNSHNPKIVWLRETIKNLYAS 317 RN+ P + WL + IK+L +S Sbjct: 298 RNNQKPNLPWLVDAIKSLVSS 318 >UniRef50_C1PEC2 Transcriptional regulator, LysR family n=1 Tax=Bacillus coagulans 36D1 RepID=C1PEC2_BACCO Length = 304 Score = 136 bits (344), Expect = 9e-31, Method: Composition-based stats. Identities = 45/259 (17%), Positives = 92/259 (35%), Gaps = 12/259 (4%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 + ++L L+ + + VT AA ++V SA+S+ ++ L A LF + Sbjct: 1 MIRMELRQLIYFIEVAKREHVTHAADELHVAQSAISRQISLLEAELGVSLFWREGRNVRL 60 Query: 65 TPLMVSMEQNLAEWMQMSNLLLDKPHHQ-TPRGLKFELAAESPLMMIMLNALSKQIYQRY 123 TP+ ++ + + + + H P L + L + ++L Q +++ Sbjct: 61 TPIGKVFLEHAEKVVLEIDKAKQRMHEFLDPDNGTVRLGFSTGLSVQTFSSLLAQFREKH 120 Query: 124 PQATIKLRN-WDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCV 182 P + + I GE+++ + + A+ E+L+ + + Sbjct: 121 PGLEYQFVQGTPSYLIRLIENGELELALASP---------VPDDHPAVSGEILYMEKLML 171 Query: 183 WLRKDHPALHQTW-NLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQS 241 R+DHP Q L I+ S L ++ G E IA + E Sbjct: 172 LFRRDHPLSGQKMIRLAQLKNERFITFREGFSIREILFAACRKSGFEPAIAFEGEDMETI 231 Query: 242 LFMAAQPDNLLLATAPRYC 260 + A + + P Sbjct: 232 KGLVASGTGVAILPEPALL 250 >UniRef50_C3BJ72 YwqM (Probable transcriptional regulator YwqM) n=4 Tax=Bacillus RepID=C3BJ72_9BACI Length = 298 Score = 136 bits (344), Expect = 9e-31, Method: Composition-based stats. Identities = 57/308 (18%), Positives = 104/308 (33%), Gaps = 25/308 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L ++ + T+A +++ T S ++ + L +PLF + T + Sbjct: 1 MELRHLKTFIIVAESGGFTRAGEQLGYTQSTITNHIRSLEEEIGNPLFDRLGKKVILTDV 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQAT 127 M + +++SN L+ + A LM+ L A+ + ++YPQ Sbjct: 61 GEHMLSYAHKILELSNEALESSQMNGKFSGTIRIGANESLMIYRLPAVLYEFKRKYPQVH 120 Query: 128 IKLRNWDYDSLD-AITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRK 186 I L+ + L + G+ D L I L + + Sbjct: 121 IILQPSESQELHNELKSGKFDFALFTHPE---------QLGTDIVTHSLVQEKIVLIAPP 171 Query: 187 DHPALHQ-TWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMA 245 HP + + + L + + S L+ ++E G I S F Sbjct: 172 KHPLTKKVSVSPAD-LEGEMLLLTEPGSYRDLLERRIKEDG----INCSHIHFWSI-EAI 225 Query: 246 AQPDN--LLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 Q L ++ P + ++ Q L LP K V L +HK P Sbjct: 226 KQTVMCGLGISYLP-FITVKEEIEQGKLSVLP-----WTYSKDFVTTELAYHKSKWLTPA 279 Query: 304 IVWLRETI 311 + L E I Sbjct: 280 MKKLIEMI 287 >UniRef50_A7ZNW2 Transcriptional regulator, LysR family n=40 Tax=Enterobacteriaceae RepID=A7ZNW2_ECO24 Length = 318 Score = 136 bits (344), Expect = 9e-31, Method: Composition-based stats. Identities = 51/280 (18%), Positives = 96/280 (34%), Gaps = 15/280 (5%) Query: 1 MKKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPL 60 M L L+ L L L ++ ++T A+ +++T A+SK L+ L LF Sbjct: 17 MANWAQKLKLHHLQMLVALGEQGNLTHVARMMHITQPALSKWLSHLEDEIGLTLFERHSK 76 Query: 61 GLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTP--RGLKFELAAESPLMMIMLNALSKQ 118 GL PT + Q+ + + ++ + A+ Sbjct: 77 GLRPTEGGKLLLQHAQRLINDMERSQHELARFKQGGLVGSLKIGCSPVATDCVSQAIL-H 135 Query: 119 IYQRYPQATIKLRNWDYDS-LDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFS 177 + + P + + L + G VD+ R +L L ++Y VL++ Sbjct: 136 LLKEMPTLHLNIEEKVMTPLLQDLLAGSVDVVVG--------RIGGRALQLPLNYRVLYT 187 Query: 178 DVPCVWLRKDHPALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRE-RTIAMSL 235 + C R +HP + + + I ++DN L + G + Sbjct: 188 EPVCFVARPEHPLAKYAILSWNDLANWRWIVWPTGTPIRISIDNALVDHGVMLPENTIES 247 Query: 236 PEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALP 275 S + D + + + R Q Y QL ++ LP Sbjct: 248 ASMNVSTNLLQSSDMISILSL-RLAQRYASQGQLVILNLP 286 >UniRef50_B7IPY3 Transcriptional regulator, LysR family n=74 Tax=Bacillales RepID=B7IPY3_BACC2 Length = 300 Score = 136 bits (344), Expect = 1e-30, Method: Composition-based stats. Identities = 46/317 (14%), Positives = 99/317 (31%), Gaps = 31/317 (9%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L Q + + +TKAA+ +++ ++SK++A+L PLF ++ Sbjct: 1 MELLQLKYFQTVARLEHMTKAAEELHIAQPSLSKTIARLEKDLGVPLFDRQGRQITLNSF 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTP-RGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + + + + +A + +L L + +P Sbjct: 61 GKVFLKRVERIFHELSEGEREIKDLAELQQGSITMAVS---IPRILPELLGSFLREHPNV 117 Query: 127 TI-KLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + + E+D S I +E L ++ + + Sbjct: 118 RFQQFLASTPSMKRQLENMEIDFCLSSVPVEGE----------EIVWEPLITEEIFLVVP 167 Query: 186 KDHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 H ++ +L P IS+ D +E G IA + E + Sbjct: 168 SGHRLSNRESIHLHEVKDEPFISMNTGYGFRHLTDEFCKEAGFTPHIAFEVDEPTVISDL 227 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQ---LPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 Q L +A P N L ++ + L W K+ + Sbjct: 228 IKQ--GLGIAFVPNLTLLKNSTLAANKLRIIEP----------ACKRTIGLSWSKKRYLS 275 Query: 302 PKIVWLRETIKNLYASM 318 RE + + ++++ Sbjct: 276 KTAQQFREFVIDYFSNI 292 >UniRef50_A8SVR7 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=A8SVR7_9FIRM Length = 291 Score = 136 bits (344), Expect = 1e-30, Method: Composition-based stats. Identities = 40/254 (15%), Positives = 78/254 (30%), Gaps = 16/254 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L+ + L + T AA+ +N+T ++S ++++L LF + T Sbjct: 1 MNLSYIRYFVELAHVQHYTNAARNLNITQPSLSHAISQLEEELGVMLFEKNGRNTELTAF 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRY--PQ 125 + + ++ + L PL M + L+ + ++ Sbjct: 61 GREFLACAERSLGTLDAGVESIQKEAAGDGVIRLGLIRPLGMEFVPRLAAEYLKKAENRN 120 Query: 126 ATIKLRN-WDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 + LD + + D+ F R + V Sbjct: 121 VSFTFHTGTTGQLLDDLAARKYDMVFCSRPPETM----------GFSAIPVGRQDLVVIA 170 Query: 185 RKDHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 HP + L LRY H+ +D + + LG+ IA E E Sbjct: 171 PSGHPLADRDSVTLGDTLRYKHVYFSKGSGMRSLVDEMFEGLGKAPEIACETEEDEVIAG 230 Query: 244 MAAQPDNLLLATAP 257 + A +A P Sbjct: 231 LVAT--GFGIAVVP 242 >UniRef50_B9TDR3 HTH-type transcriptional regulator xapR, putative n=1 Tax=Ricinus communis RepID=B9TDR3_RICCO Length = 301 Score = 136 bits (343), Expect = 1e-30, Method: Composition-based stats. Identities = 47/256 (18%), Positives = 96/256 (37%), Gaps = 10/256 (3%) Query: 7 TLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTP 66 ++DL L + +E+S ++AA+R++++ +S+ + KL + LF + T Sbjct: 2 SIDLKQLKYFLAVAEEKSFSRAAERLHISQPPLSQQIMKLESELGVKLFARTTRTFELTV 61 Query: 67 LMVSMEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNALSKQIYQRYPQ 125 ++ A+ + + +D + + M + +L ++ ++P+ Sbjct: 62 AGKALMSEAADLLARMRMTIDTIRQIDRGEVGRLRVGIVGSAMWGPIPSLLEEFQTKFPR 121 Query: 126 ATIKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 T L +A+ +VD+GF + E+ F + CV + Sbjct: 122 VTWTLHEMGPTLQYEALRAKQVDVGFWREPRIDDDVL----KNDNLRQELCFREDVCVAI 177 Query: 185 RKDHPALHQT-WNLDTFLRYPHISICWE-QSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 + HP Q L P +++ + S L + G + TIA E + L Sbjct: 178 NEHHPLAKQEAIELMDIAEEPMLTLALDKSSFPRYLMQCCVQAGFQPTIAQEATEPQTLL 237 Query: 243 FMAAQPDNLLLATAPR 258 M L +A P Sbjct: 238 AMVGA--GLGVALMPE 251 >UniRef50_Q394W2 Transcriptional regulator, LysR family n=10 Tax=Burkholderiales RepID=Q394W2_BURS3 Length = 314 Score = 136 bits (343), Expect = 1e-30, Method: Composition-based stats. Identities = 58/314 (18%), Positives = 105/314 (33%), Gaps = 19/314 (6%) Query: 6 TTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPT 65 L L L L L +++++A + T A+SK L +L PLF GL PT Sbjct: 5 HRLRLRHLQVLLSLAGTGNLSQSAVALATTQPALSKWLKELEEDVGLPLFERHARGLRPT 64 Query: 66 PLMVSMEQNLAEWMQMSNLLLDKPHHQ-TPRGLKFELAAESPLMMIMLNALSKQIYQRYP 124 ++ ++ ++ D + + Q+ +R P Sbjct: 65 SYGEALIEHARRVEAQLDVARDDMAALREGGSGLVTIGTSGVAAADTVPLAVSQLLKRMP 124 Query: 125 QATIKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVW 183 +A +++ + L + R E+DI R + + + E L+ D Sbjct: 125 RAQVRMTESTMNQLMPQLARSELDIVVG--------RSGSTFVDPLLHAEALYVDPVVFV 176 Query: 184 LRKDHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 R DH T D L Y I AL+ L GR R Sbjct: 177 ARPDHALAGATSVGWDDVLAYSWIVWPSGTPVHNALEAALSAAGRVRPPHCVESNSSILN 236 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 +LL + R Q + QL+ + ++ + L + ++ WH +++ Sbjct: 237 LTLLNNTDLLGVASHRAAQRFAQLNAIRILPMQLE--------GQGAVSMYWHPDSANRA 288 Query: 303 KIVWLRETIKNLYA 316 + E ++ A Sbjct: 289 AVAATIECLRACAA 302 >UniRef50_P52661 HTH-type transcriptional regulator gbpR n=1 Tax=Azospirillum brasilense RepID=GBPR_AZOBR Length = 342 Score = 136 bits (343), Expect = 1e-30, Method: Composition-based stats. Identities = 42/274 (15%), Positives = 86/274 (31%), Gaps = 14/274 (5%) Query: 6 TTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPT 65 L L L L + R++ +AA + ++ A SK L L LF G+ P Sbjct: 14 ARLKLRHLQLFVALDEHRNLHRAAASLTMSQPAASKLLGDLEESLGVTLFERHGRGVEPN 73 Query: 66 PLMVSMEQNLAEWMQMSNLLLDKPHH-QTPRGLKFELAAESPLMMIMLNALSKQIYQRYP 124 M ++ + ++ + + + ++ + + + +P Sbjct: 74 WYGGLMIRHARTILSGLQEAGEELNDLLAGHSGSVSIGTVMAPAVELVVPVITTLTRDHP 133 Query: 125 QATIKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVW 183 I + D L + + +G +D H + DY+ + S+ C Sbjct: 134 DLKIAVAVETSDVLAERVRQGVMDFAIGRLPDHVDASC--------FDYQEISSEELCFV 185 Query: 184 LRKDHPA--LHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGR-ERTIAMSLPEFEQ 240 R HP L + + I ++ + + G + Sbjct: 186 CRDGHPLLRLGRPLTAADLVDATWILQPLGSLLRSRVEALFRAEGVPPPRKVIESASPVI 245 Query: 241 SLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVAL 274 SL M A+ D++ A Q ++ +V Sbjct: 246 SLAMVAENDSV-TVFARALAQVFSPTGSCTIVPF 278 >UniRef50_B0T3V7 Transcriptional regulator, LysR family n=1 Tax=Caulobacter sp. K31 RepID=B0T3V7_CAUSK Length = 294 Score = 136 bits (343), Expect = 1e-30, Method: Composition-based stats. Identities = 41/274 (14%), Positives = 82/274 (29%), Gaps = 15/274 (5%) Query: 7 TLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTP 66 + L + + S T+AA+ + ++ A++ + + LF S + T Sbjct: 2 HITLGQIRAFVTVASTFSFTRAAEVLGLSQPALTNRIRQFEESLGLRLFDRSTRSVELTN 61 Query: 67 LMVSMEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQIYQRYPQ 125 + + + + + LA +L L + P Sbjct: 62 VGRELLPIFRRLVGEFEGAVINARDYASKVKGVVRLACLPSCAATLLPDLIARFQIDNPS 121 Query: 126 ATIKLRN-WDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 AT + + + + VD G + EL LF D V Sbjct: 122 ATFVVEDALNSRVATMVREDRVDFGIGMADGEAGDLEL----------TRLFDDTLQVVH 171 Query: 185 RKDHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 ++HP +++T YP I + S ++ GR T A + ++ Sbjct: 172 PREHPIAQAPVIDVETLSHYPLILMNRGSSVRDLVEGAFLAAGRTATPACEVTYMSTAVA 231 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLP 277 + L L+ P + ++ P Sbjct: 232 LVRA--GLGLSILPSTAVELRSQPDVAARSIDDP 263 >UniRef50_C7QGK1 Transcriptional regulator, LysR family n=1 Tax=Catenulispora acidiphila DSM 44928 RepID=C7QGK1_CATAD Length = 298 Score = 136 bits (343), Expect = 1e-30, Method: Composition-based stats. Identities = 41/269 (15%), Positives = 87/269 (32%), Gaps = 9/269 (3%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +D+ L L+ L +V+ AA+ + +TPSAVS+ LA L L + T Sbjct: 2 IDVRQLRTLRALADHGTVSAAAEALYLTPSAVSQQLAVLSKSTGCELLERRGRNVVLTEA 61 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQAT 127 + + + +P + +A +M ++ K + + + + Sbjct: 62 ARVLVGHADAVFAQLERAQSELRAISPAPMTVRIAGFPTAVMAVIAPAMKALREAHEEWR 121 Query: 128 IKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRK 186 ++ + +S+ + G VD+ + I L +V + Sbjct: 122 FEIADTESEESVAHLIDGTVDVAVVMAAPNRPLLG-----DPRIRILPLLEEVYVAAVPA 176 Query: 187 DHPA-LHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMA 245 H + L + P + S + + + G + +F +L + Sbjct: 177 GHRLAAAERIGLADLVEEPFVLAAEGLSCHDQVTAICADAGFQPRGRYRATDFSAALALI 236 Query: 246 AQPDNLLLATAPRYCQYYNQLHQLPLVAL 274 A + + P + LV L Sbjct: 237 A--NGFGVTLLPTLGVPPLMPEGVVLVPL 263 >UniRef50_C3JGQ8 LysR-family transcriptional regulator n=2 Tax=Rhodococcus erythropolis RepID=C3JGQ8_RHOER Length = 307 Score = 136 bits (343), Expect = 1e-30, Method: Composition-based stats. Identities = 44/270 (16%), Positives = 83/270 (30%), Gaps = 13/270 (4%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 LDL L L + +E SVT AA + ++S L +L + PLF + GL T Sbjct: 2 LDLIRLRVLVAVAREGSVTAAADSLGYAQPSISHHLRQLESEVGVPLFQRAGRGLRLTDA 61 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTP-RGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + E + + + + R + LAA + ++ +YP Sbjct: 62 GAVLVRRATEILGHVDAAVAEVQTYAGLRTGRLRLAAFPSALASLIPQAMAAFTSQYPDV 121 Query: 127 TIKLRNWD-YDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 +I L + + +L + +VD+ L + L D + Sbjct: 122 SISLVDAEPPKALALLRNNDVDVAVVFAHEDTPEVGL-----KHVAQTTLLEDPLYLITS 176 Query: 186 KDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMA 245 + + I+ C G I ++ + Sbjct: 177 ARNADAANEIT--DYAGETWIAGCPSCRAHLL--TACNRAGFIPRIEFETDDYVAVQALV 232 Query: 246 AQPDNLLLATAPRYCQYYNQLHQLPLVALP 275 A ++T P +Q + +P Sbjct: 233 AS--GSGVSTLPALALQAHQNPSIRAHRIP 260 >UniRef50_C1DSG7 Transcriptional regulator, LysR family n=1 Tax=Azotobacter vinelandii DJ RepID=C1DSG7_AZOVD Length = 299 Score = 136 bits (343), Expect = 1e-30, Method: Composition-based stats. Identities = 46/282 (16%), Positives = 90/282 (31%), Gaps = 22/282 (7%) Query: 1 MKKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPL 60 M I+ L L+ + S T+ +++++++ A+S S+ KL L + Sbjct: 1 MLMDIS---FRQLRAFILIAETSSFTRTSEQLHLSQPALSYSIRKLEDALGLRLLARNTR 57 Query: 61 GLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQI 119 + TP ++ + + H L A L + Sbjct: 58 SVELTPAGEHFLPQARRMLRDMDDAIRDAHEALNLIRGTIRLGALPTAAASFLPGVIAAF 117 Query: 120 YQRYPQATIKLRNWDYDSLDA-ITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSD 178 + +P I LR+ + A + GEVD G + L + V Sbjct: 118 GRDHPGVKISLRDGRAGEVKAWVQNGEVDAGITSLPEDLSGLGFEPLLDDNLVLLV---- 173 Query: 179 VPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEF 238 R++ + DT+ P+I++ + S D L+ LG A + Sbjct: 174 ------RQE----GASKEPDTWKTLPYIALTADTSIRPLADEALRHLGVTTQPAWEVAHM 223 Query: 239 EQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDE 280 + + + + + P C + L LP+ Sbjct: 224 STAAALVRE--GIGFSLLPASCTTF-LHIGADLSVLPIEQPT 262 >UniRef50_Q46MR5 Transcriptional regulator, LysR family n=1 Tax=Ralstonia eutropha JMP134 RepID=Q46MR5_RALEJ Length = 320 Score = 136 bits (343), Expect = 1e-30, Method: Composition-based stats. Identities = 35/243 (14%), Positives = 85/243 (34%), Gaps = 12/243 (4%) Query: 7 TLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTP 66 +L+L L L ++ SV++AA+ ++V A+S +A+L L + S G+ PT Sbjct: 10 SLELRQLRYLVGVVDAGSVSRAAQSLHVAQPALSAQIARLEEELGARLLIRSVRGVVPTE 69 Query: 67 LMVSMEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQIYQRYPQ 125 ++ + ++ + + + H L + ++ L Q+ +R PQ Sbjct: 70 AGTAVLRQARLILKQVDAIAELAHEADADPTGSVSLGLPWTVRSVVGLPLLHQVRERLPQ 129 Query: 126 ATIKLRNWDYDSLD-AITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 +++ +L +G++D+ + S L + L ++ + Sbjct: 130 VRLEIIEGPSPALAMQTAQGKLDLAVVFENTPDNSLVL----------KPLATESLLLVG 179 Query: 185 RKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 ++ L+ P + + ++ + G I + + Sbjct: 180 QRGSLVGRHNLKLEELAGLPLLMLSRPNGVREDIERQCAKRGIRLKIVAEINAPSLLIDA 239 Query: 245 AAQ 247 Sbjct: 240 VRG 242 >UniRef50_C4DMI0 Transcriptional regulator, COG0583 n=2 Tax=Actinomycetales RepID=C4DMI0_9ACTO Length = 458 Score = 136 bits (343), Expect = 1e-30, Method: Composition-based stats. Identities = 53/320 (16%), Positives = 106/320 (33%), Gaps = 30/320 (9%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSP--LGL 62 +++++L L + + +E S +AA R+ T S VS+ +A L +F + Sbjct: 1 MSSVELRHLATMAAVAEEGSFGRAASRLRYTQSTVSQQIAALEKTIGGAVFERPGGPKPV 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQR 122 TPL + E + + L D + ++ + +++L L +++ R Sbjct: 61 RLTPLGSVVLAQGQELLAQAEALTDAVDRFKAGEGRIDIGTFQSVSIVILPRLVRRLRDR 120 Query: 123 YPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCV 182 +P I+L + ++ G++D+ F R L +++ L D + Sbjct: 121 HPGCDIRLSEDEPENP---RIGDLDLLFYDRP-----------LDGDVEHLKLIDDPYLL 166 Query: 183 WLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 R L+ P ++ + D ++ L G I E L Sbjct: 167 VSRNG-TFDEGPVALERLDGMPMVAW-PDICDQSRMEEALASHGVRPQIVFRTAGNEALL 224 Query: 243 FMAAQPDNLLLATAPRYC---QYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 M + A P +L + L Q L W + Sbjct: 225 SMVRA--GMGPALLPWLALDGTDAWSDDRLRVHQLEPAPPARQ-------IYLYWQAGRT 275 Query: 300 HNPKIVWLRETIKNLYASMA 319 H+P ++ +A Sbjct: 276 HSPLARAAIRIAGDIATEIA 295 >UniRef50_B8GM38 LysR family transcriptional regulator n=4 Tax=Proteobacteria RepID=B8GM38_THISH Length = 337 Score = 135 bits (342), Expect = 1e-30, Method: Composition-based stats. Identities = 46/244 (18%), Positives = 85/244 (34%), Gaps = 20/244 (8%) Query: 10 LNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMV 69 L L Q S+++AA+R+ V+ +VS + L + LF + T Sbjct: 14 LRQLRAFCQAAQTGSISRAAERLCVSQPSVSLLIKGLEQDLNVLLFERRGPRIELTAAGQ 73 Query: 70 SMEQNLAEWMQMSNLLLDKPHHQTPR-----GLKFELAAESPLMMIMLNALSKQIYQRYP 124 + + ++ + L P R +LAA ++ +L K+ +RYP Sbjct: 74 VLLETSLPLVEGMDHL---PEVFAARLGEAGQGSLDLAAGESTILYLLPEYVKRFSERYP 130 Query: 125 QATIKLRNWD-YDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVW 183 + L N D L + GEVD + +P + Y +F+ P + Sbjct: 131 AVKLHLHNVTGRDGLKMLRAGEVDFAVGS----------MIDVPEDMHYHPIFTYEPMLI 180 Query: 184 LRKDHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 +HP + +L+ I S +D V + G + + + +E Sbjct: 181 TALNHPLAKKKKVSLEDVSPCGLILPPRHLSTWSIVDLVFHQHGLDYHVVLEAGGWEVIK 240 Query: 243 FMAA 246 Sbjct: 241 KFVE 244 >UniRef50_C6B6X6 Transcriptional regulator, LysR family n=1 Tax=Rhizobium leguminosarum bv. trifolii WSM1325 RepID=C6B6X6_RHILS Length = 302 Score = 135 bits (342), Expect = 1e-30, Method: Composition-based stats. Identities = 41/246 (16%), Positives = 92/246 (37%), Gaps = 17/246 (6%) Query: 13 LLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSME 72 L + +RS+++AAK++N++ A+S+++ +L + PLF + G+ + ++ Sbjct: 4 LRQFVEVANQRSISRAAKKLNISQPALSRAIRQLEDSYGVPLFNRTGAGVELSVYGSALY 63 Query: 73 QNLAEWMQMSNLLLDKPHHQTP-RGLKFELAAESPLMMIMLNALSKQIYQRYPQATIKLR 131 + + ++ H +A +++L + K + +P + + Sbjct: 64 SRAVRILPALDEAKEEIEHLQGRAKAVIRIATGDLWGLVILPGIIKAFSRTHPGVVVHVE 123 Query: 132 NWDYDS-LDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPA 190 D + + + G D+ F + +++E L ++ KDH Sbjct: 124 IADDGTRFEGMRHGVYDLVFGTLSYKYEAVM-------QVEFETLARQATYIYCHKDHHL 176 Query: 191 LH-QTWNLDTFLRYPHISICWEQS-DTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQP 248 T LD LR IS + L+ R A+ + Q+L + Sbjct: 177 AKAATVTLDDLLRQRWISPGYGDDEGPGQLERQ------TRDFAVRVDSMLQALLIMQGS 230 Query: 249 DNLLLA 254 ++ A Sbjct: 231 PLVMAA 236 >UniRef50_A6X7A0 Transcriptional regulator, LysR family n=1 Tax=Ochrobactrum anthropi ATCC 49188 RepID=A6X7A0_OCHA4 Length = 308 Score = 135 bits (342), Expect = 1e-30, Method: Composition-based stats. Identities = 47/312 (15%), Positives = 109/312 (34%), Gaps = 22/312 (7%) Query: 10 LNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMV 69 L + C Q +++ + ++AA+R+ T + +S ++ L D LF + +S T Sbjct: 5 LRQIECFQAVVELGNFSRAAERVRTTQANLSHTIRDLETVLDARLFDRTTRRVSLTDAGR 64 Query: 70 SMEQNLAEWMQMSNLLLDKPHHQTPRGL-KFELAAESPLMMIMLNALSKQIYQRYPQATI 128 + + + + + + +AA L +L L +++ +P I Sbjct: 65 AFAEGALAGLAEIDRAAEVVRDLGKLRRGQVSIAAPPLLCTTVLPHLVRRVADEHPNLVI 124 Query: 129 KLRNWDYDS-LDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKD 187 K+ + + ++ + G D+G S ++ ++ D +++ Sbjct: 125 KIEDVGPEIVIEQVRNGRCDLGVGT----------FSGEDSDVESQMALRDQLMIFVSPH 174 Query: 188 HPALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAA 246 H + P I++ + + + ++ M + + L + Sbjct: 175 HDFAGHEQVRWAELDDQPIITLTQKSNIRLLTEIGFEQAKLALRPHMEVNQIHSVLSLVE 234 Query: 247 QPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVW 306 N +A P Y + L +VA PL + L+ + + V Sbjct: 235 V--NAGIAVLPAYA--FTALRGRGIVARPL-----TDPAIVREVRLITPRDREQSAATVA 285 Query: 307 LRETIKNLYASM 318 +R ++NL M Sbjct: 286 VRSILRNLLRQM 297 >UniRef50_D2YFW7 Putative uncharacterized protein n=1 Tax=Vibrio mimicus VM603 RepID=D2YFW7_VIBMI Length = 291 Score = 135 bits (342), Expect = 1e-30, Method: Composition-based stats. Identities = 44/190 (23%), Positives = 79/190 (41%), Gaps = 15/190 (7%) Query: 1 MKKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPL 60 M+ + D NLL L +L ++++ KA + +T SAVSK +AKLR +D LFV Sbjct: 1 MRFDL---DFNLLRTLIVLADKQNLKKAGIALGLTESAVSKQMAKLREQLNDDLFVRMSG 57 Query: 61 GLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGLK--FELAAESPLMMIMLNALSKQ 118 L PT +S+ + + + P +A +M L +Q Sbjct: 58 KLEPTEYTLSILPKVKMALSDLEEAVTPAA-FDPSTYAEPIHIALPDLVMERFGMVLYEQ 116 Query: 119 IYQRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSD 178 + Q +P+A++ L +W D+ + I G ++ G L +++ + + D Sbjct: 117 LLQVFPKASVTLHSWGDDTENRIITGSINFGI---------HLLNPDRSMSLYQQKISDD 167 Query: 179 VPCVWLRKDH 188 + H Sbjct: 168 KLVIATAAKH 177 >UniRef50_Q46SX0 Transcriptional regulator, LysR family n=4 Tax=Burkholderiales RepID=Q46SX0_RALEJ Length = 300 Score = 135 bits (342), Expect = 1e-30, Method: Composition-based stats. Identities = 37/275 (13%), Positives = 100/275 (36%), Gaps = 15/275 (5%) Query: 5 ITTLDLNL--LLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 ++ ++ L L + ++ S AA+ ++++ A+S+ + KL L + + Sbjct: 1 MSRINFGLEDLQAFVAIAEKGSFRMAAEALHISQPALSRRIEKLEMTLGSRLLERTTRRV 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGL-KFELAAESPLMMIMLNALSKQIYQ 121 T + + + + + + + + +AA + L + Sbjct: 61 DMTHIGRQFLEEARAALDILDSAVLRLGDEVGLQRGLVTVAAIPSAALHFLPDAICRFGN 120 Query: 122 RYPQATIKLRNWDYDS-LDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 R+P +++ + + ++ L ++ GE D G + + I++ + ++ Sbjct: 121 RHPGVRVRVIDENANAVLASVLSGESDFGLNF----------MGGQEPNIEFRAIRAEPY 170 Query: 181 CVWLRKDHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFE 239 + LR+DHP + + +S+ + + ++N + L R TI Sbjct: 171 RLALRRDHPWAGRDCIAWEELAGQRMVSVSKQSGNRALIENAIAHLTRRPTIHYEANHVV 230 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVAL 274 L + + + + + +L + LV Sbjct: 231 GVLALVEAGLGMAVLPGMSLPRDHPRLCGIELVEP 265 >UniRef50_B7X3R9 Transcriptional regulator, LysR family n=1 Tax=Comamonas testosteroni KF-1 RepID=B7X3R9_COMTE Length = 296 Score = 135 bits (342), Expect = 1e-30, Method: Composition-based stats. Identities = 41/271 (15%), Positives = 90/271 (33%), Gaps = 15/271 (5%) Query: 7 TLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTP 66 D+ L + + S +AA+ ++++ A+S+ + KL L + + Sbjct: 2 NFDIADLKAFVAVAELASFKRAAELLHISQPALSRRVEKLEQALSLKLLERTTRKVELNA 61 Query: 67 LMVSMEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQIYQRYPQ 125 + + L R +A ++ ++ + QI +++P+ Sbjct: 62 MGRVFLPRAQHVLAELEASLIGMTELNERLHGLVTIACIPSVVDTVVASAIHQIKKQFPR 121 Query: 126 ATIKLRNWD-YDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 +++ + D L + R EVD G L + +D+E L S+ + Sbjct: 122 IRLRILDQPAADILLTVARSEVDFGIGY----------LGASEPDLDFEELASESFVLAC 171 Query: 185 RKDHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 RKDHP + ++ + +D L + L Sbjct: 172 RKDHPLATRSSICWSELAHQDCVTQAQGSGNRLLIDQALSNTVTRPHWVCEVQHVPSLLS 231 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVAL 274 + + + + P++ L +PLV Sbjct: 232 LVRR--GVGVGAVPQHAISGTDLCGIPLVEP 260 >UniRef50_C7PZR8 Transcriptional regulator, LysR family n=1 Tax=Catenulispora acidiphila DSM 44928 RepID=C7PZR8_CATAD Length = 301 Score = 135 bits (342), Expect = 2e-30, Method: Composition-based stats. Identities = 42/280 (15%), Positives = 84/280 (30%), Gaps = 19/280 (6%) Query: 1 MKKSITTLD---LNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVN 57 M+ +D L L L R +T A + V+ +S++LA++ A LF Sbjct: 1 MRIDRRIVDAVLLRDLSWFVALADHRHMTDTAAILGVSQPTLSRALARVEAELGTRLFER 60 Query: 58 SPLGLSPTPLMVSMEQNLAEWMQMSNLLLDK-PHHQTPRGLKFELAAESPLMMIMLNALS 116 +P G++P P + + + L + P G LA + ++ L Sbjct: 61 APDGVAPNPNGDLVVAAARDLLARYEQLTTELSARLDPDGGVVRLAFLDSMGTSLVPQLL 120 Query: 117 KQIYQRYPQATIKLRNWDYDS-LDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVL 175 + + P + L + L + G ++ + + L Sbjct: 121 RAFHLHAPGVRVLLSQEPGHAILADLRTGAAELAVT-----------FPRPAGDFGWLPL 169 Query: 176 FSDVPCVWLRKDHPA-LHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMS 234 + + + H + L + +D +L E G I+ Sbjct: 170 HRERLVLAVPPTHRLHARKRVALSELADEELVMTPVGFGFRTLVDRLLAEAGVVPRISFE 229 Query: 235 LPEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVAL 274 + + A L +A P + + L Sbjct: 230 SADLSTIEGLVAA--GLGVAVIPEQLVGPSGTVAIALTTP 267 >UniRef50_A6W1X7 Transcriptional regulator, LysR family n=1 Tax=Marinomonas sp. MWYL1 RepID=A6W1X7_MARMS Length = 326 Score = 135 bits (342), Expect = 2e-30, Method: Composition-based stats. Identities = 45/310 (14%), Positives = 109/310 (35%), Gaps = 12/310 (3%) Query: 11 NLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVS 70 L+ L+ L ++ AA+++ ++ A+SK L +L D LF P G+ PT + Sbjct: 17 RHLIMLKTLGDTSNLNLAAEKLGISQPAISKLLKELEDGLDAQLFERLPRGVKPTACGLI 76 Query: 71 MEQNLAEWMQMSNLLLDKPHHQTP-RGLKFELAAESPLMMIMLNALSKQIYQRYPQATIK 129 M + ++ + ++ + + + ++ +I YP + Sbjct: 77 MIHYAKQLLKTLDNAFEEVNAIKQGLKGSVRIGSILTPCTDLIPETLAKISTNYPNLDVS 136 Query: 130 LRN-WDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDH 188 ++ D L + GE+D+ S + + + P+ + L+ + V ++ Sbjct: 137 VKTGSSDDLLHMLNNGEIDLSISRHNNDYNRQGFIYE-PIYRTTDPLYPEPVMVCAGVNN 195 Query: 189 PALHQTWN--LDTFLRYPHISICWEQSDTWALDNVLQELGRE--RTIAMSLPEFEQSLFM 244 P + L Y + + + + + G + R I ++ + Sbjct: 196 PLVKDKITLSLANLANYDWVLPPNKSVMRDEFEAMFHKSGMQPPRQI-ITAENLLIITSL 254 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHK-RNSHNPK 303 + ++ P + + L + + + + + L HK N +P Sbjct: 255 LEKS--QIITLLPSAVMEHYMKYGL-MTQVKVDESLQTELGKILKVYGLIHKGENLLSPA 311 Query: 304 IVWLRETIKN 313 + E ++N Sbjct: 312 SRAVLELLRN 321 >UniRef50_B2I357 Transcriptional regulator n=14 Tax=Moraxellaceae RepID=B2I357_ACIBC Length = 286 Score = 135 bits (341), Expect = 2e-30, Method: Composition-based stats. Identities = 48/314 (15%), Positives = 109/314 (34%), Gaps = 31/314 (9%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 ++ + +M+ S++ AA ++ +T AV+K + L +F LF ++ G+ Sbjct: 1 MNLAAFE-----AFVKVMETGSISVAADQLFITQPAVTKRIHSLEEYFGVKLFESAGRGV 55 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDK-PHHQTPRGLKFELAAESPLMMIMLNALSKQIYQ 121 T S+ + W+ + H QT + ++ + + L A K Q Sbjct: 56 QATHAAHSLLPKVKSWLNELRDIHHTLSHEQTQIQGRLKIGTSHHIGLHHLPAPLKHFVQ 115 Query: 122 RYPQATIKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 ++PQ T+ + D + + + G++++ F S ++Y +++D Sbjct: 116 QFPQVTLDVHFVDSEQAHEQVLAGDLELAFLTLP---------PSGDERLNYITIWNDPL 166 Query: 181 CVWLRKDHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFE 239 HP + L + YP + + ++ G + I MS Sbjct: 167 VFVAAPFHPLAQKKNLTLQDLIEYPSLLPAAQTYTAQITLAEFEKQGLKPKITMS-NNPL 225 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 +S+ M Q L + ++ ++WH + Sbjct: 226 ESIRMLVSIGLGWSVLPKTLLNQDMQQLDLNV-------------EMNRQLGMVWHPART 272 Query: 300 HNPKIVWLRETIKN 313 + + L + ++ Sbjct: 273 QSRAMQELIKMMQE 286 >UniRef50_B1J741 Transcriptional regulator, LysR family n=4 Tax=Pseudomonadaceae RepID=B1J741_PSEPW Length = 397 Score = 135 bits (341), Expect = 2e-30, Method: Composition-based stats. Identities = 54/310 (17%), Positives = 92/310 (29%), Gaps = 19/310 (6%) Query: 13 LLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSME 72 L L + R + A+ ++ AVS +L L PLFV + GL PT + Sbjct: 104 LQVFVKLCETRHMQTVARHFGLSQPAVSAALKVLEGGCGQPLFVRTSRGLQPTVASRDIL 163 Query: 73 QNLAEWMQMSNLLLDKPHH-QTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQATIKLR 131 + + L Q + A +L + ++ Q + Sbjct: 164 FPIRRALNELRHLDSDLSAMQGTLRGVVHVGALPLGRSRILPEAILRFTAQHLQVRVVTN 223 Query: 132 NWDYDSLD-AITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPA 190 +D L + G+VD H + +L+ E L ++ + R+ HP Sbjct: 224 ESPFDLLATELRVGDVDFVLGALRPHDYASDLVG--------EPLINEEMVLLARRGHPL 275 Query: 191 LHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGR-ERTIAMSLPEFEQSLFMAAQPD 249 LH L + + LDN G + + + + D Sbjct: 276 LHTPLTLKGVHQARWVLPRAGSPARGLLDNCFAAAGLPAPWPVVESADLAVIRGLLVRSD 335 Query: 250 NLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWLRE 309 L +A + L LPL L+ +P V L Sbjct: 336 MLAAVSAHQLAYEIASG---ELQRLPLVLP-----GTARAIGLMQRSGCLQSPAAVALMA 387 Query: 310 TIKNLYASMA 319 I+ + A Sbjct: 388 CIRQVITEHA 397 Score = 65.4 bits (159), Expect = 3e-09, Method: Composition-based stats. Identities = 14/74 (18%), Positives = 31/74 (41%) Query: 12 LLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSM 71 + + + SV++A + + S V++++A+L A F PLF G+ T + Sbjct: 11 QVRAFIRVAELGSVSRATQVLFRAQSVVTRAIAELEARFAVPLFERHANGMRLTDYGECL 70 Query: 72 EQNLAEWMQMSNLL 85 + + + Sbjct: 71 LPRAQRVLAELDGV 84 >UniRef50_Q7W108 Probable LysR-family transcriptional regulator n=2 Tax=Bordetella RepID=Q7W108_BORPA Length = 305 Score = 135 bits (341), Expect = 2e-30, Method: Composition-based stats. Identities = 44/305 (14%), Positives = 92/305 (30%), Gaps = 26/305 (8%) Query: 13 LLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSME 72 L C + +E SV+ AA R+++T +S L KL LF L PT Sbjct: 6 LKCFVAVYEEGSVSAAAVRLHMTQPPLSILLRKLEDELRVGLFDRGGRRLVPTAAGELFY 65 Query: 73 QNLAEWMQMSNLLLDKPHHQTP-RGLKFELAAESPLMMIMLNALSKQIYQRYPQATIKLR 131 + + + + + + ++ + + + + + + Sbjct: 66 LRAKAMLANLQTIRRELREVEQGARGLVHIGCSTAASLFIVPRVMEDLAAEGLEIVLHVH 125 Query: 132 NWD-YDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPA 190 + L + +D+ + + ++ +V+ + V L HP Sbjct: 126 EGEIGYMLQQLRERSLDLTICRSQH----------MAPDLESQVIMEEPLFVALPPGHPL 175 Query: 191 LHQ-TWNLDTFLRYPHISICWEQSDTWALDNVLQE---LGRERTIAMSLPEFEQSLFMAA 246 + L + T D VL+ G + E + Sbjct: 176 AGRARVRLADLRDERF-LLHRSPLGTGISDMVLRACRNAGFAPNVVYWGG--ETLPMLLM 232 Query: 247 QPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVW 306 L +A AP+ LV + + ++W ++ + +P W Sbjct: 233 ARRGLGIAFAPQSFAQLGLQGLAALVPV-------ADAEFRTHLNMVWPRQQALSPIASW 285 Query: 307 LRETI 311 +RE I Sbjct: 286 VRELI 290 >UniRef50_UPI0001745DD5 transcriptional regulator, LysR family protein n=1 Tax=Verrucomicrobium spinosum DSM 4136 RepID=UPI0001745DD5 Length = 290 Score = 135 bits (341), Expect = 2e-30, Method: Composition-based stats. Identities = 36/304 (11%), Positives = 88/304 (28%), Gaps = 23/304 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L+ L + + + + ++AA+ +V+ ++S+ + KL + LF T Sbjct: 1 MELHQLRYMVAVARTGNFSRAAQTCHVSQPSLSQQIQKLEDELGERLFDRLRRHAKLTQA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQ-TPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 ++ + + + + + +L L +YP Sbjct: 61 GERFLPRAVRILEEMDAATREARAANDLDQGRITVGVLPTIAPYLLPKLIAAFSAKYPGV 120 Query: 127 TIKLRNWDYDSLDAI-TRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + + L + EVDI + L + LF + + L Sbjct: 121 QVVVHEDTTARLRELTAACEVDIAIAS----------LPLQDERFEVRELFDEELLLALP 170 Query: 186 KDHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 +H + + + L I + + + ++ + E + Sbjct: 171 NNHRLVDQKKIIPEDLLEEKFILMKEGHCLGDQVLHFCHRQDFHPQVSCRSAQMETVQSL 230 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHK-RNSHNPK 303 + + PR ++ + +L P + W + R Sbjct: 231 VQS--GMGITLVPRMALQEDRSVKPVYRSLSDPSPKR-------TIVAFWPRQRPLGKAA 281 Query: 304 IVWL 307 WL Sbjct: 282 AAWL 285 >UniRef50_B1Z1E9 Transcriptional regulator, LysR family n=50 Tax=Burkholderia RepID=B1Z1E9_BURA4 Length = 306 Score = 135 bits (341), Expect = 2e-30, Method: Composition-based stats. Identities = 45/284 (15%), Positives = 90/284 (31%), Gaps = 17/284 (5%) Query: 1 MKKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPL 60 M + L++ L +S+ AA+ + VT A++ ++ +L + L V S Sbjct: 1 MTRIRNHLNIAQLQAFVSAAHHKSLRAAARELGVTQPAITHTIRELETALNAELLVRSVR 60 Query: 61 GLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQI 119 G+ T ++ + + ++ + + + + L Sbjct: 61 GVELTACGHALLPRAEQLLGDMRRTVEAVEQVKGEMSGRVAVGTMPSIALTALPHAVTAF 120 Query: 120 YQRYPQATIKLRNWD-YDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSD 178 + P ++ L D+L + G +DI + + +L L S Sbjct: 121 RRSMPNVSLHLEEVTVPDALAQLRNGTLDIA---------AMHHVPALDRDFTQVPLLST 171 Query: 179 VPCVWLRKDHPALHQTWNLDTFLRYPHIS-ICWEQSDTWALDNVLQELGRE-RTIAMSLP 236 V +R+ HP H L+ L I + EQ + + G + P Sbjct: 172 EFTVVMREGHPLAHAR-RLEEMLDAEWIVTVGAEQLPHSVMSAMFDARGLPLPKRLLRSP 230 Query: 237 -EFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFD 279 F +L + A+ D + T P + L Sbjct: 231 MSFAVTLGLVARSDVIGCFTRP--LAAMVAPLGIRTAELDESMP 272 >UniRef50_C7PVI0 Transcriptional regulator, LysR family n=11 Tax=Actinomycetales RepID=C7PVI0_CATAD Length = 297 Score = 135 bits (341), Expect = 2e-30, Method: Composition-based stats. Identities = 40/257 (15%), Positives = 82/257 (31%), Gaps = 14/257 (5%) Query: 10 LNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMV 69 + L + + R T+AA+ ++VT ++S+ + L LF+ + ++ T Sbjct: 3 FHQLRYFIAVAETRHFTRAAEALHVTQPSLSQQIRALEHELGADLFLRARGNITLTDAGE 62 Query: 70 SMEQNLAEWMQMSNLLLDKPHHQTPRGL-KFELAAESPLMMIMLNALSKQIYQRYPQATI 128 ++ + ++ + L A L +L + + ++RYP + Sbjct: 63 ALLPMARRILADADAARREVQELAELRRGHVRLGATPSLCTGLLPDVLRTYHRRYPGIQL 122 Query: 129 KLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKD 187 ++ +D + + RG +D+ L S A+ E L + V + Sbjct: 123 LVQESGSHDLVRDLARGALDLALVVLP--------LPSPSPALTTEELLREDLVVVSAPN 174 Query: 188 HPALHQ--TWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMA 245 P + I + G E A+ E + L A Sbjct: 175 LPPPGDGRQVRIADLEHEQLIMFRHGYDLRDLTVAACRAQGFEPVFAIEGGEMDAVLGFA 234 Query: 246 AQPDNLLLATAPRYCQY 262 L +A P Sbjct: 235 RA--GLGVAIVPSMVAQ 249 >UniRef50_A4J6T9 Transcriptional regulator, LysR family n=1 Tax=Desulfotomaculum reducens MI-1 RepID=A4J6T9_DESRM Length = 299 Score = 135 bits (341), Expect = 2e-30, Method: Composition-based stats. Identities = 49/308 (15%), Positives = 112/308 (36%), Gaps = 34/308 (11%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L+ L ++ ++++++ AA+ I++T A+SK L+ L A+F L G+S TP Sbjct: 1 MNLSTLQTFIVVAEKKNLSLAAQEIHITQPAISKQLSVLEAYFGTALVERKGRGVSLTPA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 ++ E ++ N + + + L A + +L + + YP Sbjct: 61 GELFYRHAREMLEQLNKAEREIRQMSGEIRGRMILWASTIPGHYILPPIIGTFKKEYPDV 120 Query: 127 T--IKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 +++ + +++ + + + I+ FSD V Sbjct: 121 QTVLQIGD-SKEAIRKLLEESAHLA----------AVGILPNNKRIEGIKFFSDELVVIA 169 Query: 185 RKDHPALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGR---ERTIAMSLPEFEQ 240 DHP ++ + P + ++ L + G + IA+ L Sbjct: 170 PTDHPFAELNEVPIEKLAKEPLVWRELGSGTRSVVETFLTKGGLSTDKLNIALELGSTGA 229 Query: 241 SLFMAAQPDNLLLATAPRYC----QYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHK 296 + ++ R+ Q N++ L + LP+ + L++ + Sbjct: 230 IVTAVEA--GAGVSVVSRWATLKEQALNKIATLKIKDLPM----------QRDLFLVYPR 277 Query: 297 RNSHNPKI 304 R + +P I Sbjct: 278 RKNRSPMI 285 >UniRef50_C9KJ25 Transcriptional regulator GltC n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KJ25_9FIRM Length = 307 Score = 135 bits (341), Expect = 2e-30, Method: Composition-based stats. Identities = 54/298 (18%), Positives = 106/298 (35%), Gaps = 24/298 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L Q + + T+AA+ + V+ SA+S+S+ KL LF T Sbjct: 1 MELTQLKYFQAMAKCHHFTQAAEEMAVSQSALSRSIQKLEQELGVTLFERHGRTSELTEA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQAT 127 ++ ++ L + L+ L L + +Q ++RYP Sbjct: 61 GQKFLFHVDRVIRELALAEQEIELDNGGAGVVHLSFLHSLGDTFLPLILRQFHERYPHID 120 Query: 128 IKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRK 186 +KL + L + +T GE DI + P + + L+S+ + + + Sbjct: 121 VKLNQQNSSMLSEQLTSGETDICLCSTMNEPDTAWMY-----------LWSEEMFLVVPE 169 Query: 187 DHPALHQ-TWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMA 245 DHP + NL P +++ E + ++ L I E + Sbjct: 170 DHPLAQKSRVNLREIEDEPFVALKPEYTLRQQVNQFLDLAESHPQIVFEGDEVHTLVSFV 229 Query: 246 AQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 A +L ++ P L +V +P+ F ++ + W+ +P Sbjct: 230 AA--HLGVSILPHV----PCTEHLGVVFVPISFPLCKR-----AVGIAWNTSRPLSPA 276 >UniRef50_A4F7Y9 Transcriptional regulator, LysR family n=3 Tax=Actinobacteria (class) RepID=A4F7Y9_SACEN Length = 333 Score = 135 bits (340), Expect = 2e-30, Method: Composition-based stats. Identities = 44/297 (14%), Positives = 91/297 (30%), Gaps = 30/297 (10%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L + +E+S+T+AA R+++ +S L KL L + G T Sbjct: 1 MELRHLRYFVAIAEEQSLTRAAARLHIAQPPLSAQLRKLETELGAVLVHRTARGTQLTDA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQ-TPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + + + + R + L ++L + +Q RYP+ Sbjct: 61 GRVLLEEARRILHEVDHAAQMTREAGSGRVGRLSLGFIPSASNVVLPPILRQFKARYPEV 120 Query: 127 TIKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 ++LR D ++ + +D GF L ++ + D + L Sbjct: 121 RLRLREMRPDEIVERLHDRRIDAGFFY----------LPIDDPSLHVRSVADDSLVLALP 170 Query: 186 KDHPALHQT-WNLDTFLRYPHISICW--EQSDTWALDNVLQELGRERTIAMSLPE---FE 239 HP +L P I ++ + G + P+ + Sbjct: 171 STHPLADSPEVDLRAVAGEPFILPPRYDMPGLYTSVTQACERAGFTPRVVQ--PDVWLMQ 228 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHK 296 + + A + +A P Q + F + W + Sbjct: 229 TIVGLVAG--GMGIAVVPSSVQQIPRAGA--------TFVPLTDVSATARMAMAWRR 275 >UniRef50_A7NQH4 Transcriptional regulator, LysR family n=2 Tax=Roseiflexus RepID=A7NQH4_ROSCS Length = 331 Score = 135 bits (340), Expect = 2e-30, Method: Composition-based stats. Identities = 43/258 (16%), Positives = 88/258 (34%), Gaps = 19/258 (7%) Query: 12 LLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFD-DPLFVNSPLGLSPTPLMVS 70 L +++ S + AA+R++++ AVS + L A D LF + PT Sbjct: 14 HLQTFLAVVETGSYSAAAERLHLSQPAVSSHIRALEAQLDQVRLFRRVGQQMLPTQAGEE 73 Query: 71 MEQNLAEWMQMSNLLLDKPHHQT-PRGLKFELAAESPLMMIMLNALSKQIYQRYPQATIK 129 + E ++++ ++ + + ++L + +R+P + Sbjct: 74 LIAMAREMLELATQAEERIRSLRGQLSGRVAIGCTPSGAEVLLTGILHAFRERHPAVCLS 133 Query: 130 LRNWDYDS-LDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDH 188 + D L+ ++R + I F + R ++L D + +DH Sbjct: 134 VNVASVDIVLEQLSRQHIHIAFIEEKQSSR----------HWVVQLLGIDPLVLIAPRDH 183 Query: 189 PALHQTWNL-DTFLRYPHISICWEQSDTWALDNVLQELGRER---TIAMSLPEFEQSLFM 244 H+ L D + P I + +D LQ G + + +L Sbjct: 184 ELAHRGLILPDALRQAPIIMPRSGSATRRVIDEGLQAGGLAPADVRVVLETDSATVALEA 243 Query: 245 AAQPDNLLLATAPRYCQY 262 + LA P+ C Sbjct: 244 VCS--GIGLAFVPQSCAL 259 >UniRef50_C6D5Q8 Transcriptional regulator, LysR family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D5Q8_PAESJ Length = 299 Score = 135 bits (340), Expect = 2e-30, Method: Composition-based stats. Identities = 42/246 (17%), Positives = 85/246 (34%), Gaps = 18/246 (7%) Query: 12 LLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPL-GLSPTPLMVS 70 LL + + + RS T A +++N+T AVS+++ L L + G++ TP+ Sbjct: 5 LLQLIVAISETRSFTTAGEKMNMTQPAVSRAVTTLERELGVTLLIRDRRHGVALTPVGER 64 Query: 71 MEQNLAEWMQMSNLLLDKPHHQTP-RGLKFELAAESPLMMIMLNALSKQIYQRYPQATIK 129 + + E +Q + + + + + A + L I Q+YP Sbjct: 65 IVRTFREILQGYDKIDQEIASEKGMETGSVRIGAFPVAATYFVPKLISHIKQQYPNLEFS 124 Query: 130 LRNWD-YDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDH 188 + D + + E+D+G L L+ + +R DH Sbjct: 125 IVEGTIADVQEWLDNREIDVGL------------LIPSDKTAHSYPLYREGIYAVMRDDH 172 Query: 189 PALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQ 247 P + + + P + + + + G TI L + +L M Sbjct: 173 PLNEKGIISPEDLRDEP--MLICKAGYEPPVLKWFEGSGETPTIKYILYNYRTALQMILA 230 Query: 248 PDNLLL 253 + L + Sbjct: 231 GEGLAV 236 >UniRef50_A0KPQ5 Transcriptional regulator n=1 Tax=Aeromonas hydrophila subsp. hydrophila ATCC 7966 RepID=A0KPQ5_AERHH Length = 307 Score = 135 bits (340), Expect = 2e-30, Method: Composition-based stats. Identities = 55/299 (18%), Positives = 99/299 (33%), Gaps = 24/299 (8%) Query: 1 MKKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPL 60 M + + + SV++AA ++++ SAV+ ++ +L LF +P Sbjct: 1 MNFTFRQI-----RYFVAVADSFSVSRAAAELHISQSAVTSAIRELETELGAALFERNPR 55 Query: 61 GLSPTPLMVSMEQNLAEWMQMSNLLLDK-PHHQTPRGLKFELAAESPLMMIMLNALSKQI 119 G+S T + + + + + + L+ + Sbjct: 56 GVSLTTQGHQFLLHARRILGAMTEAGQSLKAVAQQDQGRLTIGVTTLVAGYYLSEALGRF 115 Query: 120 YQRYPQATIKL-RNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSD 178 + +P I++ + I GEVD+G R A D E+L Sbjct: 116 RRAFPAVQIEVKEDEQPYLEHQIVNGEVDVGILMTNRTIRQ--------EAFDTELLTRS 167 Query: 179 VPCVWLRKDHPA-LHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPE 237 VWL +HP T +L P IS+ +Q D + L+ G I + Sbjct: 168 PLRVWLAANHPLCAESTLSLKALGEEPMISLTADQLDQ-IIGGGLRRYGIAPRIVLRTAS 226 Query: 238 FEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHK 296 E + A L LA P + L Q + A + + L+W + Sbjct: 227 VEAVRSLVAS--QLGLALLPDFAYRPWSLEQERVEARAIKEPIP-----AIDIGLVWRR 278 >UniRef50_B8IDW8 Transcriptional regulator, LysR family n=1 Tax=Methylobacterium nodulans ORS 2060 RepID=B8IDW8_METNO Length = 305 Score = 135 bits (340), Expect = 3e-30, Method: Composition-based stats. Identities = 40/277 (14%), Positives = 92/277 (33%), Gaps = 18/277 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +DL L +L +ER +AA+R++++ +S ++ +L LF + ++ TP Sbjct: 1 MDLRQLRYFAVLAEERHFGRAARRLSLSQPPLSHAIRQLEEELGATLFTRTSRQVALTPA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQT-PRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 ++++ +Q + H R + + + L+ + + P Sbjct: 61 GTALQREAKAILQRAADARVLVHDIACGRRGRLRIGFSGSTVYRGLSHILTAMRTEAPDI 120 Query: 127 TIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + LR + + ++A+ E+D GF L P +D + ++ L Sbjct: 121 KVALREMNSAEQVEALLHDELDAGF----------VHLRERPEGLDGILFHAEPFVTCLP 170 Query: 186 KDHPALHQT----WNLDTFLRYPHISICW--EQSDTWALDNVLQELGRERTIAMSLPEFE 239 HP L + ++ + + G + + + Sbjct: 171 VGHPMAATPDPSETRLIDLQHEDFVLFSRTVSPDYYESILAICRTAGFLPRVRHEVRHWL 230 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPL 276 + A + L + LP+ P+ Sbjct: 231 TVAALVAHGAGVALVPQALAGSQLAGVVFLPIPPSPI 267 >UniRef50_Q67SW7 LysR family transcriptional regulator n=1 Tax=Symbiobacterium thermophilum RepID=Q67SW7_SYMTH Length = 305 Score = 135 bits (340), Expect = 3e-30, Method: Composition-based stats. Identities = 36/248 (14%), Positives = 69/248 (27%), Gaps = 14/248 (5%) Query: 13 LLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSME 72 L + + S +AA+R+ +T +V+ + L LF P G+ T ++ Sbjct: 6 LEAFWWIAKTGSFNRAAERLFLTQPSVTARIQALEKELGQQLFERRPRGVRLTDAGRALL 65 Query: 73 QNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNALSKQIYQRYPQATIKLR 131 + +Q + + +L + + + YP + + Sbjct: 66 PHAERVLQDIKRARQAVLDLQTASGGTLSVGSALTTSAYLLPDILLRFKRGYPNVEVLVH 125 Query: 132 NWDYDSLDAI-TRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPA 190 + + V +G I L + + + DHP Sbjct: 126 TGRSHQVQQLVLDDTVQVGLVHAPLPSH---------AEIVSYPLSEEPILLVVPPDHPV 176 Query: 191 LH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQPD 249 LD + I+ ++ G I M L E + M Sbjct: 177 ARHSEVTLDELTQESFITTDRASGYWALVEQWWASQGFVPHITMELDSIEAAKRMVLC-- 234 Query: 250 NLLLATAP 257 L L P Sbjct: 235 GLGLTMLP 242 >UniRef50_B2UBD9 Transcriptional regulator, LysR family n=8 Tax=Betaproteobacteria RepID=B2UBD9_RALPJ Length = 314 Score = 135 bits (340), Expect = 3e-30, Method: Composition-based stats. Identities = 46/267 (17%), Positives = 98/267 (36%), Gaps = 18/267 (6%) Query: 6 TTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPT 65 + + L C + QER++ +AA+R++++ AVSK+L +L A L G T Sbjct: 11 SRIRFRHLSCFVAIAQERNLRRAAERLHLSQPAVSKTLGELEALAGVQLVERGRQGARLT 70 Query: 66 PLMVSMEQN---LAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQR 122 ++ + + ++ + L + A + +L ++ + Sbjct: 71 AAGEQFLRHAVGVTQALESAAAALMGST--DASAPVVHVGALPTVASSLLPRAIAHLHAQ 128 Query: 123 YPQATIKLRN-WDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPC 181 P A ++LR + + L A+ GE+D R + + +E+L+++ Sbjct: 129 RPHAGVRLRTGTNVELLTALKAGELDFIVGRMAEPDRMQ--------GLSFELLYAEPLA 180 Query: 182 VWLRKDHPALHQT---WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMS-LPE 237 + +R HP L Q +L L YP + + + Q G ++ Sbjct: 181 LVVRPGHPLLSQPGASASLQAVLDYPLVIATPGTVPRHHTEALFQTHGLRLPAGVTETLS 240 Query: 238 FEQSLFMAAQPDNLLLATAPRYCQYYN 264 + +A + D + + Sbjct: 241 VSVARLLACRSDAVWITPERAAGDDLA 267 >UniRef50_B5G8L5 Transcriptional regulator n=3 Tax=Actinomycetales RepID=B5G8L5_9ACTO Length = 301 Score = 135 bits (340), Expect = 3e-30, Method: Composition-based stats. Identities = 41/268 (15%), Positives = 86/268 (32%), Gaps = 10/268 (3%) Query: 11 NLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVS 70 L L+ + S + AA+ + T AVS+ + L PL V + + T + Sbjct: 5 RHLRVLRAVATTGSFSAAARTLGCTQPAVSQQMKALEGAAGTPLLVRTGREMRLTEAGEA 64 Query: 71 MEQNLAEWMQMSNLLLDKPHHQTP-RGLKFELAAESPLMMIMLNALSKQIYQRYPQATIK 129 + ++ + + ++ R + L + ++ + + + +P + Sbjct: 65 LSRHASGILAGLTAAEEEVAAIAGLRAGRVRLVSFPSGSSSLVPSALAALRRDHPGTRVS 124 Query: 130 LRNWD-YDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDH 188 L + S++ + G+ DI + R + L D + + H Sbjct: 125 LEEAEPPRSVELLREGDFDIALAFRYGTEADDSAREW--EGLVVRPLLRDRLVGLVPEGH 182 Query: 189 PA--LHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAA 246 + F R P I+ C L V E G I + ++ + A Sbjct: 183 RLDGRAGPVGIAEFAREPWIAGCPR--CRTQLVKVCAEAGFTPRIDFATDDYPAVHALVA 240 Query: 247 QPDNLLLATAPRYCQYYNQLHQLPLVAL 274 L +A P + + + L Sbjct: 241 A--GLGVAVLPALALESVRPEGVRTLTL 266 >UniRef50_A9C0Y6 Transcriptional regulator, LysR family n=1 Tax=Delftia acidovorans SPH-1 RepID=A9C0Y6_DELAS Length = 316 Score = 135 bits (340), Expect = 3e-30, Method: Composition-based stats. Identities = 41/272 (15%), Positives = 89/272 (32%), Gaps = 17/272 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++ L Q +M S T AA+R+ ++ +S+ LA+L LF+ L PT Sbjct: 9 MNFKQLEAFQAIMLSGSTTGAAERLGLSQPGISRLLAQLEQDLGLRLFIREKGRLVPTQE 68 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTP---RGLKFELAAESPLMMIMLNALSKQIYQRYP 124 ++ + M + + ++A L ++ A++ Q Q +P Sbjct: 69 AEALLHDAQVLMDSAQCFRRHAEQLRLGGFKRRLLKVAVPGTLATSLMPAIAHQFMQAHP 128 Query: 125 QATIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVW 183 +++ + Y ++ A+ + DIG L + Sbjct: 129 DVVLEVLSGSYTETERALLSRDADIGL----------VRLPMTMPGLRTRACLESEAVCI 178 Query: 184 LRKDHPALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 + + H + P I + ++ +D + + +A+ + ++ Sbjct: 179 MPRGHALQALDEVTPSDLVDAPLILLGRQREIRQEIDMAFRHARVQPRVAVEVHSVGEAC 238 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVAL 274 AQ L ++ Y Q L Sbjct: 239 AHVAQ--GLGVSMVNGLLASYCQPGALSSRPF 268 >UniRef50_Q7W708 Putative LysR-family transcriptional regulator n=2 Tax=Bordetella RepID=Q7W708_BORPA Length = 298 Score = 135 bits (340), Expect = 3e-30, Method: Composition-based stats. Identities = 43/299 (14%), Positives = 98/299 (32%), Gaps = 27/299 (9%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +DL + + +ERS ++AA+R++++ +S+ + L + PLF P G+S T Sbjct: 1 MDLKQMRYFVAVAEERSFSRAAERLHISQPPLSQQIKALEEELNAPLFHRLPRGISLTAA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNALSKQIYQRYPQA 126 ++ ++ + L + + S + ++ + Q+ + P + Sbjct: 61 GAALLKSSRAILANVRLAAQETTQIAAGMLGTVRMGTVSSALAHLVPYILTQVKRSMPGS 120 Query: 127 TIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 ++L + A+ R E+DIG + + + + Sbjct: 121 KVELTEMSSREQTLAVLRDELDIGLVHTPIDT----------ADLRTRQILREPFYAAVP 170 Query: 186 KDHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQ---ELGRERTIAMSLPEFEQS 241 HP + + + + D ++ G I + Sbjct: 171 SQHPLASREAVPVAELASEEFVFF-PRTLASGLFDKMVSLCMNAGFSPKIHHTARHQSTM 229 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 L M A L + PR Q + + F + +L+W + ++ Sbjct: 230 LQMVAM--GLGVTIVPRSLQRIYKGSAV--------FLPLTGTPHYLELSLIWRESTAN 278 >UniRef50_A6F002 Transcriptional regulator, LysR family protein n=1 Tax=Marinobacter algicola DG893 RepID=A6F002_9ALTE Length = 299 Score = 135 bits (340), Expect = 3e-30, Method: Composition-based stats. Identities = 36/281 (12%), Positives = 93/281 (33%), Gaps = 16/281 (5%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L+LL + ++RS ++AA+ I+++ AVS+++ +L L + T Sbjct: 1 MNLHLLRTFASVAEQRSFSRAAEAIHISQPAVSRAVRELEEQLGMALLERRGGQVRLTEA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRGL-KFELAAESPLMMIMLNALSKQIYQRYPQA 126 + Q+ + + + + A + L + + +++P Sbjct: 61 GAELYQHARAIFALEQSAMADLRGRQGLERGSLTIGASRTIGTYFLPPVIAEFLRQFPAI 120 Query: 127 TIKLRNWDYDSLD-AITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 +++ + + + + + E+DI F E + D + Sbjct: 121 DVRIISENTELIQRRLLAYELDIAFIEGSVEDSRVEEV----------FWHEDELVILAH 170 Query: 186 KDHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 DHP L ++ + +L++ G + + + + Sbjct: 171 SDHPLLNRKSLKASDLDAERWVLREQGSGTRSVTLALLKQAGVKVDRTIEVGGNGALVQS 230 Query: 245 AAQPDNLLLATAPRYCQY-YNQLHQLPLVALPLPFDESQQK 284 A L LA + + ++ ++ P F + Sbjct: 231 VAA--GLGLAMVSSVAAREHLSVGKVNVLNFPDRFKRPLHR 269 >UniRef50_Q1QWP3 Transcriptional regulator, LysR family n=1 Tax=Chromohalobacter salexigens DSM 3043 RepID=Q1QWP3_CHRSD Length = 296 Score = 134 bits (339), Expect = 3e-30, Method: Composition-based stats. Identities = 49/297 (16%), Positives = 95/297 (31%), Gaps = 22/297 (7%) Query: 10 LNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMV 69 L +++ +V AA+++ ++ SA S++LA L LF L Sbjct: 7 FRQLQVFVAVIRGGAVNAAARQLRLSQSATSQALADLERQLGVVLFERLGRRLELNDAGR 66 Query: 70 SMEQNLAEWMQMSNLLLDKPHHQT-PRGLKFELAAESPLMMIMLNALSKQIYQRYPQATI 128 + + + + L+D +AA + + +L L+ + +R+P + Sbjct: 67 RLLPYAEKVLNGLDELVDAAREPDGELRGTLHVAASATIGTYLLPMLAGRFIERHPAVDL 126 Query: 129 KLRNWD-YDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKD 187 +LR + D + I R + D+G + + E+ D V Sbjct: 127 QLRLRNTEDVMRDIQRFDADLGLIEGQCSESR----------LVSELWCQDEMVVVAAPQ 176 Query: 188 HPA-LHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAA 246 HP ++ I + + + M L + E Sbjct: 177 HPLAARDGLGVEELQAAQWILREPGSGTRAIFEAAIHPHVERIRVRMELDQHEAIKQAVR 236 Query: 247 QPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 L +L + LVAL P ++ F+L+WH +P Sbjct: 237 AGFGLGCL---SRLSVAGELERGELVALRSPLQLTR------SFSLVWHPERYRSPL 284 >UniRef50_B0N992 Putative uncharacterized protein n=2 Tax=Clostridium RepID=B0N992_EUBSP Length = 335 Score = 134 bits (339), Expect = 3e-30, Method: Composition-based stats. Identities = 44/290 (15%), Positives = 91/290 (31%), Gaps = 22/290 (7%) Query: 10 LNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMV 69 L L + + S+TKAA +++ +VS + +L ++ LF G++PT Sbjct: 3 LRHLNIFVSVYEYNSITKAADALHIAQPSVSLVIKELEEYYGIQLFDRIGRGITPTEAGK 62 Query: 70 SMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQATIK 129 + + + N + + + + A + +L L K+ + +P IK Sbjct: 63 ELYSYAIHIVSLFNEMAQRIKNWDNV-GTLRIGASITIGTHILPGLIKEYQKDFPYLRIK 121 Query: 130 L-RNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDH 188 + N I ++DIG + I + D C + + Sbjct: 122 VTVNKSATIEQHILDNKIDIGLIENQPD----------HPEILSQPFMKDNLCAIVPNED 171 Query: 189 PALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQ 247 P + L+ P + + LD + + Sbjct: 172 PLSSKAYITLEELASRPFLMREKGSAGREILDACFSLKNIHVNPLWESSSTQAIVKGV-- 229 Query: 248 PDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKR 297 NL +A P + + + LP ++ +++HK Sbjct: 230 SMNLGVAVLPYLLIK-RDIEEHNVNYLPFKTPLTR------NLNIIYHKS 272 >UniRef50_A8I2X1 Putative transcriptional regulator n=1 Tax=Azorhizobium caulinodans ORS 571 RepID=A8I2X1_AZOC5 Length = 318 Score = 134 bits (339), Expect = 3e-30, Method: Composition-based stats. Identities = 50/311 (16%), Positives = 102/311 (32%), Gaps = 22/311 (7%) Query: 6 TTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPT 65 LD NLL ++ +ERSVT+AA+R+ + +VS +L +L + LF + T Sbjct: 9 HGLDWNLLRTFLVIAEERSVTRAAERLLLQQPSVSAALKRLEETCECRLFERGCRPMRLT 68 Query: 66 PLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGLK--FELAAESPLMMIMLNALSKQIYQRY 123 P ++ Q E + L LD + L + + L+ L+A+ +++ ++ Sbjct: 69 PQGEALYQQCRELYRAI-LTLDPGIAPSSSSLTGLVRIEIVTHLVNSGLDAVVRRLNAKH 127 Query: 124 PQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVW 183 P + + + ++ P LL+ + LF + V+ Sbjct: 128 PGISYNVEVSSSYGIVRAVSQQL---------TPFGICLLAKPLPTLSCRFLFRERFGVF 178 Query: 184 LRKDHPALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELG--RERTIAMSLPEFEQ 240 + H + + D P +S + + LG R + + P+ + Sbjct: 179 CGRGHRLFGVEAIDFDAIRNEPWVSFACAEVSNSLEPMLTLRLGADIARRVVATSPDLFE 238 Query: 241 SLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 + + + P L L + + Sbjct: 239 VRRFVNAGVGIGTLPLEAAARDVAEGALW-------PLPLPGLDALGADVYFLSNPALRY 291 Query: 301 NPKIVWLRETI 311 +P E + Sbjct: 292 SPAEQAFMEEM 302 >UniRef50_Q46Q42 Regulatory protein, LysR:LysR, substrate-binding n=1 Tax=Ralstonia eutropha JMP134 RepID=Q46Q42_RALEJ Length = 297 Score = 134 bits (339), Expect = 3e-30, Method: Composition-based stats. Identities = 48/274 (17%), Positives = 83/274 (30%), Gaps = 17/274 (6%) Query: 7 TLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTP 66 L + L L R+ T+AA+ +++ SA S + L LF + + + Sbjct: 2 NLSVKHLRAFVALATHRNFTRAARACHLSQSAFSALVQTLEEQAGSRLFERTTRHVELSA 61 Query: 67 LMVSMEQNLAEWMQMSNLLLDK-PHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQ 125 + E+ + + H R + +AA + L L QRYP Sbjct: 62 DGMRFEETARRLLGDFEAAFEDLRAHAERRKGRVSIAALPSIAGGDLPPLLAAFRQRYPG 121 Query: 126 ATIKLRNWDYDS-LDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 ++L + D +D + RG D + + E L D + Sbjct: 122 IALELFDQLADGCIDLVRRGRADFALAPAPVQ----------DDDLRVEPLVHDTFHLVC 171 Query: 185 RKDHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 H + P I + S LD L L M + Sbjct: 172 PTTHVLARKRRITPQMLAGQPFIHLSRTSSVRQHLDAALHPLKLS--SVMEVEHLATVAA 229 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLP 277 + L ++ P + Q L + L +P Sbjct: 230 LVQA--GLGVSVVPSLALFQFQRDGLAVRPLQMP 261 >UniRef50_C0D867 Putative uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D867_9CLOT Length = 301 Score = 134 bits (339), Expect = 3e-30, Method: Composition-based stats. Identities = 47/276 (17%), Positives = 85/276 (30%), Gaps = 20/276 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +DL L +++E +T+AA R+++ A+S SL +L LF + Sbjct: 1 MDLLQLKYFCAIVEEGHMTRAAARLSIAQPALSASLGRLEKELGVSLFDRVGRNICLNEC 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRGL-KFELAAESPLMMIMLNALSKQIYQRYPQA 126 S ++ + + + L L + L + +P Sbjct: 61 GQSFYAFVSPALALLENAARSVDDFKQQRLDNLVLG---SVSQTYLQDAIMAFKRLHPDI 117 Query: 127 TIKLRNWDYDSLDA-ITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 I + ++ D + + + D + EVL+ D + L Sbjct: 118 RISQFTIEPENADRELNQNDFDFLLIPKYLER----------PDFIQEVLYEDRFALALN 167 Query: 186 KDHPALHQ-TWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 HP Q L IS+ + D + G +AM Q L + Sbjct: 168 TSHPLAEQTEVRLADLKDESFISLPKGYAFRDFTDQICLSAGFTPGVAMECFH-CQMLDL 226 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDE 280 L +A P + L+ + LPL Sbjct: 227 I--SAGLGVALVPESFRKKC-LYNHTVKVLPLAGPP 259 >UniRef50_C0ZCK2 Transcriptional regulator n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZCK2_BREBN Length = 295 Score = 134 bits (339), Expect = 3e-30, Method: Composition-based stats. Identities = 41/251 (16%), Positives = 89/251 (35%), Gaps = 13/251 (5%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L + + + +ERS ++AA R+++ ++S+ +AKL LF P + T Sbjct: 1 MELRQIRYVLAVAEERSFSRAANRLHLAQPSLSQQIAKLEKILGVSLFHRLPQHVELTDA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQT-PRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 Q + MS L + K + + +L + +++P Sbjct: 61 GQRFIQVAQTLVDMSEGLEREMRAYAVGESGKLLVGSLPITGAYVLPRVLPTFTKQFPGV 120 Query: 127 TIKLRNWDYDSLDAIT-RGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 ++L L+ + RG++D+ S E++ ++ I + + Sbjct: 121 ELQLMEETSSHLEQLLVRGKIDVSLLTMPISDPSLEIIPAINEEIF----------LAVP 170 Query: 186 KDHPALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 +HP + +L P I + Q + ++ G I + + + Sbjct: 171 ANHPLAKRKEVDLAEVADQPFILLKEGQGFRTISLRLCEQAGFRPRIVFESSNIQTAQSL 230 Query: 245 AAQPDNLLLAT 255 A L A Sbjct: 231 VAAGMGLSFAP 241 >UniRef50_Q11H84 Transcriptional regulator, LysR family n=1 Tax=Chelativorans sp. BNC1 RepID=Q11H84_MESSB Length = 314 Score = 134 bits (339), Expect = 4e-30, Method: Composition-based stats. Identities = 50/321 (15%), Positives = 118/321 (36%), Gaps = 20/321 (6%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 ++ ++ + LL L +++ S+ +AA+ +N T +++S+ +L PL + G+ Sbjct: 1 MNLRSIPVAQLLELLAVVRCGSINRAAQELNTTQPTLTRSIKRLEDRLRVPLLQRTAHGV 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQIYQ 121 +P+ +M L L + T K + + + + ++ + + Sbjct: 61 TPSEYTKAMLPFLQSIESDFRKALAEIEAATGAGAGKICIGSTAMVANKIVPQVLARFVP 120 Query: 122 RYPQATIKLR-NWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 R+P TI+ + L+ + G+ D + ++R++L + LF+D Sbjct: 121 RWPHLTIEFVEDRKPALLEGLRSGKYDFVMALMSPEEQARDIL--------QQELFTDTL 172 Query: 181 CVWLRKDHPALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRE-RTIAMSLPEF 238 V R HP + ++ ++ I L+N + G + + F Sbjct: 173 VVIARPGHPLTKLSSLSVRDIVQCKWILPTEGLDLRSRLENFFRNEGHDVPAFPVETTLF 232 Query: 239 EQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRN 298 + + D ++ P ++L LVAL + F+ + + + Sbjct: 233 TAIVALVKSTDR--ISAIPSVVVR-DELLSGELVAL-----RGPWNFIHRSFSAYFRRGH 284 Query: 299 SHNPKIVWLRETIKNLYASMA 319 + +P L + + Sbjct: 285 TLSPSARELFRETRRYITELG 305 >UniRef50_Q46R60 Regulatory protein, LysR:LysR, substrate-binding n=3 Tax=Cupriavidus RepID=Q46R60_RALEJ Length = 325 Score = 134 bits (339), Expect = 4e-30, Method: Composition-based stats. Identities = 56/310 (18%), Positives = 104/310 (33%), Gaps = 20/310 (6%) Query: 10 LNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMV 69 L L C + Q + + +AA R+ +T AVSK+L++L L V G T Sbjct: 18 LRHLYCFVAVSQTQHLGRAADRLGLTQPAVSKTLSELEELAGTRLLVRQRAGTELTTAGT 77 Query: 70 SMEQNLAEWMQMSNLLLDKPHHQTPRGL-KFELAAESPLMMIMLNALSKQIYQRYPQATI 128 Q+ + + ++ + + L A ++ +L + YP+ + Sbjct: 78 RFLQHALRILADIDAAAGSVTGESAKTHERIRLGALPSVVPAVLTDAVLRFRATYPEVGL 137 Query: 129 KLRN-WDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKD 187 +R + + +D + +D+ + ++ +E L D + +R Sbjct: 138 DVRTGMNRNLIDQLKADVLDLVIGRMDDPVAM--------ESLWFESLGPDSLVLAVRPG 189 Query: 188 HPALHQ-TWNLDTFLRYPHISICWEQSDTWALDNVLQELGRE-RTIAMSLPEFEQSLFMA 245 H L L +P + +++L G + + +A Sbjct: 190 HALTKDSRPTLIDCLAWPLVIAAAGSIPRHNTESLLARHGLRLPDGCVETSDAYLGRLLA 249 Query: 246 AQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIV 305 Q D + A P LVALP+ E P LL HK + P Sbjct: 250 EQSDCVWAA--PMSATRRAMDEG-GLVALPI-----DTLGTEEPVGLLRHKDRTLTPMAE 301 Query: 306 WLRETIKNLY 315 L + I+ Sbjct: 302 ALADCIRAAA 311 >UniRef50_B6R6F6 Transcriptional regulator, LysR family n=1 Tax=Pseudovibrio sp. JE062 RepID=B6R6F6_9RHOB Length = 320 Score = 134 bits (338), Expect = 4e-30, Method: Composition-based stats. Identities = 45/296 (15%), Positives = 93/296 (31%), Gaps = 26/296 (8%) Query: 10 LNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMV 69 L L + L + S +KAA+ +T S +S S+ +L L S L T Sbjct: 11 LKQLQYFKTLAKHLSFSKAAEACFITQSTLSASIKQLEGILGCELLDRSGRTLVLTEAGE 70 Query: 70 SMEQNLAEWMQMSNLLLDKPHHQT-PRGLKFELAAESPLMMIMLNALSKQIYQRYPQATI 128 S+ + + ++ + L+ Q P +F L + +L Q+ YP+ + Sbjct: 71 SVLEKASLLLRDAEDLVQGVQAQNKPLCGRFRLGVIPSVAPFLLPRFLPQLRDLYPELQL 130 Query: 129 KLR-NWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKD 187 LR + + + A+ G +D + + SD + + Sbjct: 131 FLREDISRNLMIALREGRIDAALMALPYDT----------TGFESAEIGSDAFYLAVPGA 180 Query: 188 HPALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELG---RERTIAMSLPEFEQSLF 243 HP ++ + + ++VL G + + Sbjct: 181 HPLAGLSEVLMEDLANE---VLLLLEDGHCLRNHVLAAAGGRMLTANEDVQATSLSTLVQ 237 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 M + + + PR + L + K ++W +++S Sbjct: 238 MVD--NGIGVTLVPRIAVDADIDRGTSLK-----LIKIADPKARRTIGMVWRRKSS 286 >UniRef50_UPI00016945AE hypothetical protein Plarl_07755 n=1 Tax=Paenibacillus larvae subsp. larvae BRL-230010 RepID=UPI00016945AE Length = 303 Score = 134 bits (338), Expect = 4e-30, Method: Composition-based stats. Identities = 42/294 (14%), Positives = 96/294 (32%), Gaps = 22/294 (7%) Query: 6 TTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPT 65 + LD+ L +++ +S TKAA +++T +SK + + L S + T Sbjct: 5 SELDIRHLKYFIEVVRCKSFTKAADVLHITQPTISKMIKNIEDELGVVLLDRSTKQVMLT 64 Query: 66 PLMVSMEQNLAEWMQMSNLL-LDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYP 124 S+ + ++ L ++ + + K + + + + + +YP Sbjct: 65 DAGQSILLQAQQIVKSFENLSIELANTIHLKKGKIRMGLPPMVGSRFFPHIIGEFHHKYP 124 Query: 125 QATIKLRNWD-YDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVW 183 I+L + + G +DIG + + + + V Sbjct: 125 NIEIQLIEEGAKKVEEQVEEGHLDIGVVLLPIPSGTFDSFPFVH----------EKLMVV 174 Query: 184 LRKDHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 + H QT L P I + G + + +++ Sbjct: 175 VYPKHRLAGQTVIALKKLEHEPFILFREGFVLHDRIPEECIRAGFQPKVVYESSQWDFIS 234 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHK 296 M A L ++ P +L+ ++ +PL + ++ ++W K Sbjct: 235 EMVAA--GLGISMLPESICR--ELNPNRVITIPL-----VEPSIDWSLAMIWPK 279 >UniRef50_C5D1A4 Transcriptional regulator, LysR family n=1 Tax=Variovorax paradoxus S110 RepID=C5D1A4_VARPS Length = 299 Score = 134 bits (338), Expect = 4e-30, Method: Composition-based stats. Identities = 30/248 (12%), Positives = 71/248 (28%), Gaps = 14/248 (5%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +DL L +++ + + +A++R++ T A++ + +L LF + G+ T Sbjct: 1 MDLRDLQYFEVIAELEHMGRASERLHRTQPALTSCVKRLEEACGAALFERTGRGIRLTAA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQ-TPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 ++ + + + +L ++++ P Sbjct: 61 GKALLKWAQRTRFDVESARREIGDIGRGLAGNIRIGIVPTAAQFLLPPAARELMGEAPGI 120 Query: 127 TIKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 T++ D L + GE+D+ + ++L D V Sbjct: 121 TLRTTVALGDILTPLLRSGEIDLMVGTEGTQE----------PGFTSKLLAEDPIVVAAT 170 Query: 186 KDHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRER-TIAMSLPEFEQSLF 243 H + L Y + LD R + + Sbjct: 171 SSHEIFKKAKPTLKDLAGYRWVLQPPGAPTRDWLDQTFDRSHLPRPQVQVESTMLLMLPS 230 Query: 244 MAAQPDNL 251 + + L Sbjct: 231 LIDETGLL 238 >UniRef50_A5G2D8 Transcriptional regulator, LysR family n=1 Tax=Acidiphilium cryptum JF-5 RepID=A5G2D8_ACICJ Length = 303 Score = 134 bits (338), Expect = 4e-30, Method: Composition-based stats. Identities = 49/255 (19%), Positives = 87/255 (34%), Gaps = 16/255 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L L +ER T+AA+R+N+ SA+S S+ L D PLFV S + T Sbjct: 1 MELRQLHHFVALAEERQFTRAARRVNIVQSALSTSIRALERELDAPLFVRSTRDVRLTGA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRGL-KFELAAESPLMMIM-LNALSKQIYQRYPQ 125 + ++ ++ L + L L + +QR+P Sbjct: 61 GEIFLEKARLAIEAVRDARSAVAEVQGLKRGTLKIGTVQSLPAFLDLPLLLARFHQRHPG 120 Query: 126 ATIKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 I+L +L D G +D F +H + ++ D + Sbjct: 121 IEIRLIQGSSSALADRTRAGGIDAAFFPVGTHL----------TDLVTTMIACDEVVLAC 170 Query: 185 RKDHPALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 + HP L+ +P + +D + G R A + + + L Sbjct: 171 PRGHPLEGLTGVTLEAIKDFPFVDFETGWGTRRLVDGRFGDAGIGRHTAFEVSDLDTMLK 230 Query: 244 MAAQPDNLLLATAPR 258 + L +A P Sbjct: 231 LV--SLGLGIALLPE 243 >UniRef50_Q46MA3 Transcriptional regulator, LysR family n=1 Tax=Ralstonia eutropha JMP134 RepID=Q46MA3_RALEJ Length = 296 Score = 134 bits (338), Expect = 4e-30, Method: Composition-based stats. Identities = 34/254 (13%), Positives = 84/254 (33%), Gaps = 15/254 (5%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +DL L + +E + T+AA+R+++ +S + +L D L + + T Sbjct: 5 MDLRHLRYFIAIAEELNFTRAAERLHIAQPPLSMQIRQLEEEMDVTLLNRTRRHVELTEA 64 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQ-TPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + ++ + + + + + +L + + +R+P Sbjct: 65 GRIFLEQARQILRATERAVVQAQRAHRGETGRLTVGFFEHTSYTLLPPILRAYRERFPSV 124 Query: 127 TIKLRNWD-YDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 I LR + +A+ RG+ DI F + +E + + + + Sbjct: 125 EILLRWFPVVKQAEALRRGDADISFMRPVPDLE----------EVTWETILEEPFVLAVP 174 Query: 186 KDHPAL-HQTWNLDTFLRYPHISICWE--QSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 HP ++ +L + P + E + G + + + L Sbjct: 175 ARHPLANAESISLKKCAQEPFVMYIPEMAPDFHAMNMRMCASAGFVPKVISEVGQVYTLL 234 Query: 243 FMAAQPDNLLLATA 256 + + + A Sbjct: 235 GLVSSGAGIGFVPA 248 >UniRef50_A0QCY6 Transcriptional regulator, LysR family protein n=4 Tax=Corynebacterineae RepID=A0QCY6_MYCA1 Length = 294 Score = 134 bits (338), Expect = 4e-30, Method: Composition-based stats. Identities = 41/245 (16%), Positives = 77/245 (31%), Gaps = 15/245 (6%) Query: 16 LQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSMEQNL 75 L + + VT AA++++V +++ LA+L LF LS ++ Sbjct: 9 FITLAELQHVTAAAEQLHVAQPTLTRMLARLEQRLGVALFDRHGRRLSLNTYGRIFYEHA 68 Query: 76 AEWMQMSNLLLDKPHHQ-TPRGLKFELAAESPLMMIMLNALSKQIYQRYPQATIKLRNWD 134 + P + LA S ++ L + + P+ T L Sbjct: 69 RRAQLELDSARRAIADLADPAVGEIRLAYLSSFGSTVVPRLIARFKESSPRVTFTLEEGA 128 Query: 135 YDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPALHQ 193 +S+ D + G VDIG R+ LF V + H Sbjct: 129 AESIADRVRSGGVDIGVVSPRPVERTLAW----------RSLFRQRLGVAVPDGHRFARG 178 Query: 194 -TWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQPDNLL 252 ++ P +++ LD + +A+ P + + A L Sbjct: 179 AAVSMVDLADEPFVTMHPGFGMRRLLDELCAAAQFRPRVALQAPNLTTAASLVAA--GLG 236 Query: 253 LATAP 257 ++ P Sbjct: 237 ISLVP 241 >UniRef50_B2HU56 Transcriptional regulator n=17 Tax=Acinetobacter RepID=B2HU56_ACIBC Length = 295 Score = 134 bits (338), Expect = 5e-30, Method: Composition-based stats. Identities = 55/302 (18%), Positives = 103/302 (34%), Gaps = 22/302 (7%) Query: 7 TLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTP 66 + L L + QE +VTKA+ + +T SA S +LA L PLF L Sbjct: 2 RMTLRQLAVFVAVAQEGTVTKASDAVRLTQSAASMALADLEDGLGAPLFDRLGKRLQLND 61 Query: 67 LMVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 L + E + ++ + + + A + ++ L QR+PQA Sbjct: 62 LGRFLLPQALEILGRCE-AFEQAAKGELQSIDLRIGATLTISDYLMPDLMANFLQRHPQA 120 Query: 127 TIKL-RNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 ++L ++A+ + ++D+ H + D V Sbjct: 121 HLQLQVGNTRQMIEAVNQFQLDLALIEGSCHL----------PQLQCIHWRDDELAVCCS 170 Query: 186 KDHPA--LHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 DHP L++ F I DN + + + I ++L E L Sbjct: 171 PDHPLTRLNRPLTPQDFHDVEWILREEGSGTREVFDNAILQDLPDANIRLTLGHNEAILK 230 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 + A + + + ++ QL ++ P +L P +L H++ P Sbjct: 231 IVAG-GLGMSCISKLAIEPLSEKGQLVILDTPF-------WQLTRPLYMLVHRQKYQGPG 282 Query: 304 IV 305 + Sbjct: 283 LK 284 >UniRef50_A6VX33 Transcriptional regulator, LysR family n=2 Tax=Marinomonas RepID=A6VX33_MARMS Length = 293 Score = 134 bits (338), Expect = 5e-30, Method: Composition-based stats. Identities = 45/309 (14%), Positives = 103/309 (33%), Gaps = 25/309 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +D+ LL + + S ++A ++ VT AVSK +A L + LF + T Sbjct: 2 IDIAELLTFIKVAETSSFSEAGDQLFVTQPAVSKRIASLESSLGVKLFDRIGRQVQLTEA 61 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + + + + Q + ++ + + L K+ + +P A Sbjct: 62 GIRLLPKARKMAEDLQDIKRSMTLQMQDVSGELRISTGHHIGLHRLPKSLKRFQENFPNA 121 Query: 127 TIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 +++ ++ + +G ++G L + I+ ++SD + Sbjct: 122 QLEIEFVQSEEAYQDVLKGRAELGI---------ITLSNKENPLIESLPIWSDPLTCVVS 172 Query: 186 KDHPALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 KDHP +L ++ + + + G + + M+ E + Sbjct: 173 KDHPLARYNNVSLIELAQHACVLPNKNTFTRQIAEQAFGKQGLKPQVRMNTNNLEILAML 232 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 + + L LV L +E ++ HK+ + + Sbjct: 233 V-------------HIGWGWSLLPSTLVDEKLVVLNLPDLNVERKLGVIHHKQRTLSRAA 279 Query: 305 VWLRETIKN 313 V E +K+ Sbjct: 280 VAFIELLKS 288 >UniRef50_Q2KXE7 LysR-family transcriptional regulator n=3 Tax=Bordetella RepID=Q2KXE7_BORA1 Length = 305 Score = 134 bits (338), Expect = 5e-30, Method: Composition-based stats. Identities = 36/257 (14%), Positives = 88/257 (34%), Gaps = 18/257 (7%) Query: 1 MKKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPL 60 MK +I ++ + +M S+ A++ + V+ AVS+ L+ PLF + Sbjct: 1 MKLNIRQIE-----VFRAVMITGSIRGASELLFVSQPAVSRLLSHTEQRIGFPLFKRARG 55 Query: 61 GLSPTPLMVSMEQNLAEWMQMSNLLLDKPHH-QTPRGLKFELAAESPLMMIMLNALSKQI 119 L PT + + + + D + + A + +++ A Sbjct: 56 RLQPTLEAQRLFHEVEIVYEGVTRVNDIARELFEHQEGILNIVASPSIGQMLIPAAIASY 115 Query: 120 YQRYPQATIKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSD 178 Q +P + + L + + + + D+ + +L ++ + L S Sbjct: 116 RQTHPHVKLTFQYLTQAPLTERLLKRQADLAIT----------ILPIKHPNLEQQELAST 165 Query: 179 VPCVWLRKDHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPE 237 +HP + + L YP IS ++++ ++ G+ + + Sbjct: 166 SLVCICPYNHPLSRRAVLQIKDLLAYPFISYERGSPFCRMVESMFEQSGQPLRSVVEVGS 225 Query: 238 FEQSLFMAAQPDNLLLA 254 + + + + L Sbjct: 226 PQNACALVQAGAGIALV 242 >UniRef50_B8IJK2 Transcriptional regulator, LysR family n=1 Tax=Methylobacterium nodulans ORS 2060 RepID=B8IJK2_METNO Length = 306 Score = 134 bits (338), Expect = 5e-30, Method: Composition-based stats. Identities = 51/315 (16%), Positives = 97/315 (30%), Gaps = 30/315 (9%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +DL L +L ++R +AA+ +N+ +S+ + L + LF S + T Sbjct: 1 MDLRHLRYFVVLAEQRHFGRAAELLNMAQPPLSQQIKALEDELEVTLFDRSTRPIELTAA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTP-RGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 ++ + + + + + + M L + R+P Sbjct: 61 GRTLLREARQILHHVSRAQAATRRAGQGQDGHLVIGVTGSAAMEFLPPVLLAFRARWPDI 120 Query: 127 TIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + LR + + A+ RGE+ IGF L ++ ++ D V L Sbjct: 121 RLSLREMSSPEQIAALERGEIHIGFVRPPV----------LDDRLNVRLVHQDPFVVALP 170 Query: 186 KDHPALH-QTWNLDTFLRYPHISICW--EQSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 DHP + L I + +V + G S P+ L Sbjct: 171 GDHPQAGVEGVRLADLNGTALIIFDPAEAPGFRDLIIHVCRTAGYVPETLESAPQMTTML 230 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 + L A PR + + F V +W S + Sbjct: 231 ALV--SAGLGFALVPRSARRLALER--------VVFRPLLDPCAAVELYAVW----SRDK 276 Query: 303 KIVWLRETIKNLYAS 317 + L E + ++ Sbjct: 277 AVR-LAEELVSVIDE 290 >UniRef50_Q31FC6 Transcriptional regulator, LysR family n=7 Tax=Proteobacteria RepID=Q31FC6_THICR Length = 318 Score = 134 bits (338), Expect = 5e-30, Method: Composition-based stats. Identities = 47/275 (17%), Positives = 100/275 (36%), Gaps = 17/275 (6%) Query: 13 LLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSME 72 L + + S TKAA+ +++T AV+ + +L +F+ LF + ++ T + Sbjct: 6 LQVFYTVAKVLSFTKAAETLHMTQPAVTFQVKQLEEFFNTRLFDRTHNKITLTDAGKIVY 65 Query: 73 QNLAEWMQMSNLLLDKPHHQT-PRGLKFELAAESPLMMIMLNALSKQIYQRYPQATIKLR 131 + + + + T + A + + ML +L +++ I+L+ Sbjct: 66 DYAEKILDHYEKMNSEVRELTGEVTGSLLIGASTTIAEYMLPSLLGAFKKQFEDVNIRLQ 125 Query: 132 NWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPA 190 + D++ + +D+G + ++ EV D + + HP Sbjct: 126 VGNTDAIVAMVENNMIDLGVVEAPVYN----------KNLEVEVCRLDEMVLIVPHGHPL 175 Query: 191 L-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRE---RTIAMSLPEFEQSLFMAA 246 +++ +Y +IS +DN ++E G + M L E MA Sbjct: 176 SNRDKISIEDMRKYRYISREEGSGSRSVIDNYIREQGLSYSDLNVVMELGSPEAV-KMAV 234 Query: 247 QPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDES 281 + D L + +L L + L P + Sbjct: 235 ESDVGLAIVSRTTISKELKLGTLKALPLDPPLNRP 269 >UniRef50_C0F0J2 Putative uncharacterized protein n=1 Tax=Eubacterium hallii DSM 3353 RepID=C0F0J2_9FIRM Length = 297 Score = 134 bits (338), Expect = 5e-30, Method: Composition-based stats. Identities = 44/311 (14%), Positives = 95/311 (30%), Gaps = 26/311 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 + + + +E ++TKAAK++ +T VS ++ ++ + F L T Sbjct: 1 MSIRHFRIFIAVAEEENITKAAKKLYLTQPTVSVAIKEIEEHYGARFFERINQRLHITEE 60 Query: 68 MVSMEQNLAEWM---QMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYP 124 ++ + K + + A + + L ++ RYP Sbjct: 61 GKRFLDYAKHFIAMYDEMEIAF-KNTDF---TGRLRVGASVNIGTYYIPRLIREFRDRYP 116 Query: 125 QATIKL-RNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVW 183 +++ N + G++D+ G + I E LF + Sbjct: 117 GINVQVKINTTAVVEKELLDGKLDLALVGG----------TIQSEHIVAEPLFYEKYTAI 166 Query: 184 LRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 +HP +T L+ F++ P +S + + + G T + Sbjct: 167 CAPEHPMAGKTVPLEEFMKEPLLSREKSSGAYEVFQSAVNQTGLTVTPVWESTSQTTLME 226 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 L + P Q+ + + L + + +H +P Sbjct: 227 AVHY--GLGVTIVPE------QMIKREVREGRLSQITFSDFSFQNTIHIAYHHSKYLSPS 278 Query: 304 IVWLRETIKNL 314 I +K L Sbjct: 279 IKKFILLVKTL 289 >UniRef50_B1M8N3 Transcriptional regulator, LysR family n=35 Tax=Proteobacteria RepID=B1M8N3_METRJ Length = 332 Score = 133 bits (337), Expect = 5e-30, Method: Composition-based stats. Identities = 37/280 (13%), Positives = 86/280 (30%), Gaps = 15/280 (5%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +D+ L L + + SV+KAA R+N+ A+S+ + +L LF G+ T Sbjct: 12 MDIAQLRTLIHVAELGSVSKAADRLNIAQPALSRQIRQLEQELGTDLFERHGRGMVITET 71 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 ++ + + M + D + + I+ L + + +P Sbjct: 72 GRAVLVHASRVMAEMEAIRDTVASGRTSFRGTVSVGTTPTVAEIVTVPLVTALRRTHPDL 131 Query: 127 TIKLR-NWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 ++L + LD + RG++D+ S + ++ + + + Sbjct: 132 AVRLSAAYSGHILDWLQRGQIDVAVSYNPRRLHTLRIVPIMI----------ETLLLVGP 181 Query: 186 KDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMA 245 + + + G E + + F+ + + Sbjct: 182 GGREEPGAPVPFAGLAGMDLVLPSPGHMLRDIAHDCARRAGIELRVVVEADSFQSLINLV 241 Query: 246 AQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKK 285 + P + + L A PL ++ Sbjct: 242 RA--GIGATVLP-LAPVHAMVAAGDLTAAPLTDPSPTREL 278 >UniRef50_D2PY57 Transcriptional regulator, LysR family n=3 Tax=Actinomycetales RepID=D2PY57_9ACTO Length = 293 Score = 133 bits (337), Expect = 5e-30, Method: Composition-based stats. Identities = 41/269 (15%), Positives = 86/269 (31%), Gaps = 13/269 (4%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L + +++ T+AA+ ++++ S +S S+ L LFV + + T Sbjct: 1 MELRHLEHFVAVAEQKHFTRAAEAMSISQSGLSASIRALERELHASLFVRNTRSVELTEA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTP-RGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 ++ + + D + E L ++ + AL + YP Sbjct: 61 GRALLCEGRRTLAAAEAAKDAVAAVQGLLRGHLNVGLEQCLGVVDVPALLAKFRSAYPGV 120 Query: 127 TIKLRNWDYDS-LDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 I++R LD + G +D+ F P +D L ++ + Sbjct: 121 EIEVRQGGSTPMLDELASGRLDVAFVATAGDPV---------DGLDLRPLSTESMVLVCA 171 Query: 186 KDHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 DH +L+ + D G + + + + L + Sbjct: 172 HDHRLANASQVSLNDLAGESFVDFDRTWGARAISDQAFAAAGVAHPVTIEVNDVHTLLAL 231 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVA 273 A D + R +PL+ Sbjct: 232 VAH-DLGVALVPERIAAKRGDHRTVPLIP 259 >UniRef50_C6CYG5 Transcriptional regulator, LysR family n=2 Tax=Paenibacillus RepID=C6CYG5_PAESJ Length = 297 Score = 133 bits (337), Expect = 5e-30, Method: Composition-based stats. Identities = 37/268 (13%), Positives = 87/268 (32%), Gaps = 16/268 (5%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L + + E++ ++AA+++++ ++S+ L+KL LF + + T Sbjct: 1 MELRQLQYVIQIAIEKNFSRAAEKLHIAQPSLSQQLSKLEQELGVLLFRRTTNSVELTQA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRGL-KFELAAESPLMMIMLNALSKQIYQRYPQA 126 + L + + + +L + + YPQ Sbjct: 61 GQVFVDKSQSILDAIEQLKQEMDDMAQMKRGRLVVGTLPITGSHILPLVLPVFGELYPQI 120 Query: 127 TIKLRNWDYDSLDAI-TRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + L L+ + G DI S L + +++E L + C+ + Sbjct: 121 EVILVEDTTVKLEQLTANGGTDI----------SLLTLPLVDQTLEWEPLMEEEICLAVP 170 Query: 186 KDHPALH--QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 H +++ + + Q L ++ Q+ G I E Sbjct: 171 PSHRLAGRTDEISIEELREEHFVGLKKGQGFRQILVHLCQQAGFTPNIVFESSNIETVQS 230 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPL 271 + A + + P+ +P+ Sbjct: 231 LIAG--GMGITFVPKMLTRAAGGDFVPV 256 >UniRef50_Q04778 HTH-type transcriptional regulator alsR n=87 Tax=Bacillus RepID=ALSR_BACSU Length = 302 Score = 133 bits (337), Expect = 6e-30, Method: Composition-based stats. Identities = 38/261 (14%), Positives = 85/261 (32%), Gaps = 17/261 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L + +E KAA+R+N+T +S+ + +L L + + T Sbjct: 1 MELRHLQYFIAVAEELHFGKAARRLNMTQPPLSQQIKQLEEEVGVTLLKRTKRFVELTAA 60 Query: 68 MVSMEQNLAEWMQMSNLLLD-KPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + ++ + L + ++ +++P Sbjct: 61 GEIFLNHCRMALMQIGQGIELAQRTARGEQGLLVIGFVGSATYEFLPPIVREYRKKFPSV 120 Query: 127 TIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 I+LR + + +G +DIG A+ E S + L Sbjct: 121 KIELREISSSRQQEELLKGNIDIGI----------LHPPLQHTALHIETAQSSPCVLALP 170 Query: 186 KDHPA-LHQTWNLDTFLRYPHISICWEQSDTWALD--NVLQELGRERTIAMSLPEFEQSL 242 K HP ++ ++ P I++ E T +D ++ G I E++ + Sbjct: 171 KQHPLTSKESITIEDLRDEPIITVAKEAWPTLYMDFIQFCEQAGFRPNIVQEATEYQMVI 230 Query: 243 FMAAQPDNLLLATAPRYCQYY 263 + + + P + Sbjct: 231 GLV--SAGIGMTFVPSSAKKL 249 >UniRef50_Q7WC66 LysR-family transcriptional regulator n=3 Tax=Bordetella RepID=Q7WC66_BORPA Length = 320 Score = 133 bits (337), Expect = 6e-30, Method: Composition-based stats. Identities = 44/317 (13%), Positives = 103/317 (32%), Gaps = 23/317 (7%) Query: 2 KKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLG 61 + + ++L LL L+ + S +AA+ + + +AV+ + +L A LF + Sbjct: 6 SRPLPNINLKLLHTFMLVAEHCSFRQAAELSHRSQAAVTGQIKQLEAQLGVDLFHRTTRQ 65 Query: 62 LSPTPLMVSMEQNLAEWMQMSNLLLDK-PHHQTPRGLKFELAAESPLMMIMLNALSKQIY 120 + T + ++ + L + + + L+ + + L + Sbjct: 66 VRLTAEGAQLLESARRAVHEMENGLRQIQETVDLKRGRIFLSCSTTVSSTRLAPILAAFE 125 Query: 121 QRYPQATIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 + YP + +R D + + R E D G D+E + ++ Sbjct: 126 RDYPGVEVFVRELTSGDMFETVRREEADFGIGPIMEL-----------PEFDFEPILTEN 174 Query: 180 PCVWLRKDH-PALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEF 238 + ++ P + L P + + + +D+ + G + Sbjct: 175 LYAVVPRNLFPDTAEQITLARLASMPLLLLNPGTALRALIDDTARSRGLTINTKFQFSQA 234 Query: 239 EQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRN 298 + + MA L A P + LP+ + V H++ Sbjct: 235 QTLISMA--TAGLGAAVLP--AMVLPAKPHKDVQVLPIASPRMTRDVAIVRLR---HRKL 287 Query: 299 SHNPKIVWLRETIKNLY 315 + P L + +++L Sbjct: 288 T--PAAARLAQLVRDLI 302 >UniRef50_Q67PU0 LysR family transcriptional regulator n=1 Tax=Symbiobacterium thermophilum RepID=Q67PU0_SYMTH Length = 299 Score = 133 bits (337), Expect = 6e-30, Method: Composition-based stats. Identities = 41/311 (13%), Positives = 93/311 (29%), Gaps = 19/311 (6%) Query: 10 LNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMV 69 L L+ +++ +A + ++ AV++ +A L A PL S + TP Sbjct: 3 LQHLITFCRVVETGGFARAGALVGLSQPAVTRQVAALEAELGTPLLDRSGRQIHLTPAGR 62 Query: 70 SMEQNLAEWMQMSNLLLDKPHHQT-PRGLKFELAAESPLMMIMLNALSKQIYQRYPQATI 128 + + + N L ++ P + + A + + + +L + + +P + Sbjct: 63 LVYERARRIITAVNTLKEEVADLAHPERGRIAIGAVTTVGLRLLPPILAAFKREHPGIRV 122 Query: 129 KL-RNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKD 187 + + +++ + GE+++ + L D + Sbjct: 123 HVKADRTQETIQRLLEGEIELAILPTPVT----------HPRLRSVPLVEDPVVLVCAPG 172 Query: 188 HP-ALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAA 246 L L IS +D +L++ G + M E M Sbjct: 173 RRSELPDPLPLAKLGEIDLISFQAPSRFRTFVDAMLEQAGVYPNVTMEFDSHEAVTLMVE 232 Query: 247 QPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVW 306 A P +V + + + + F H +P Sbjct: 233 A--GFGCALVPASAVERELALG-TVVRVEVEGMPRMARTTSLAFR---HPNPGWSPATER 286 Query: 307 LRETIKNLYAS 317 L + I + + Sbjct: 287 LFQMIVDFFRQ 297 >UniRef50_Q47P44 Putative LysR-family transcriptional regulator n=1 Tax=Thermobifida fusca YX RepID=Q47P44_THEFY Length = 301 Score = 133 bits (337), Expect = 6e-30, Method: Composition-based stats. Identities = 55/293 (18%), Positives = 98/293 (33%), Gaps = 17/293 (5%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 LD N L L + + S+T AA+R++ TP A+S+ LAKL L G+ T Sbjct: 2 LDANRLRVLVEVARAGSITAAAERLSFTPPALSQQLAKLERELGCALLERGRNGVRLTEA 61 Query: 68 MVSMEQNLAEWMQMSNLLLDK-PHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + + L A + +L + + + +P Sbjct: 62 GRVLLDHGERVLGELREAERAVRATLGQHPSTLSLGAFASAGTTLLPSALAEFRRAHPHV 121 Query: 127 TIKLRNWD-YDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + L + + D +T G++D+ + + E L +D + L Sbjct: 122 RLALSDVEPPDGYGLVTSGDLDLLITHCYPGTELPSA-----TGLRRERLLTDPLMLVLP 176 Query: 186 KDHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 HPA+ + L I + AL+ E G E T+A ++E +L + Sbjct: 177 DGHPAIDKPRITLADLADEEWICGAPGIHNRIALETAAAEAGVEVTVAYETRDYEVTLAL 236 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKR 297 + + P + HQ L L L++ R Sbjct: 237 IRA--GVGIGLVPATILRTHPEHQWHAHQL-------SGTDLARTIFLVYRPR 280 >UniRef50_D1VD43 Transcriptional regulator, LysR family n=1 Tax=Frankia sp. EuI1c RepID=D1VD43_9ACTO Length = 361 Score = 133 bits (337), Expect = 6e-30, Method: Composition-based stats. Identities = 52/312 (16%), Positives = 95/312 (30%), Gaps = 26/312 (8%) Query: 10 LNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMV 69 L L + + + T+AA R++V ++S + L PLF + ++ T Sbjct: 21 LQQLAYFVAVAETKHFTRAAARVHVAQPSLSAQIRALETELGSPLFNRARGNITLTAAGE 80 Query: 70 SMEQNLAEWMQMSNLLLDKPHHQ-TPRGLKFELAAESPLMMIMLNALSKQIYQRYPQATI 128 ++ + + +++ + R + A L ML + + QRYP + Sbjct: 81 ALLPLARKILADADMARREVQELTDLRRGTVRVGATPSLCTGMLPEVLRLFRQRYPGIQL 140 Query: 129 KLRN-WDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKD 187 + D + + G +D+ L A+ L + V D Sbjct: 141 LVEEGGSRDLVGELAVGALDLALIILP--------LQGSDPALATAPLLREDLVVISSPD 192 Query: 188 H--PALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMA 245 P ++ P + + G E T A+ E + Sbjct: 193 GPPPVRTAQMAVEDLRDRPLVMFRRGYDLRDFTVGACRAAGFEPTFAIEGGEMDAVCGFV 252 Query: 246 AQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP-KI 304 L +A P + PL P L L H+R+ P Sbjct: 253 MA--GLGIAVIPSMVA-----FRQPLRTTPFAAP-----GLHRTIGLA-HRRDVEPPRAA 299 Query: 305 VWLRETIKNLYA 316 LR T+ + A Sbjct: 300 RELRATLVDFVA 311 >UniRef50_Q7NKC0 Nitrogen assimilation transcriptional activator n=1 Tax=Gloeobacter violaceus RepID=Q7NKC0_GLOVI Length = 326 Score = 133 bits (337), Expect = 7e-30, Method: Composition-based stats. Identities = 46/261 (17%), Positives = 78/261 (29%), Gaps = 15/261 (5%) Query: 6 TTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPT 65 + LD L L S AA++ V+ +SK + L PLF + S T Sbjct: 10 SGLDSRQLQYFLALNHCGSFRLAAEQCGVSQPGLSKQIMALEGELGGPLFDRTGRRASLT 69 Query: 66 PLMVSMEQNLAEWMQMSNLLLDKPHH-QTPRGLKFELAAESPLMMIMLNALSKQIYQRYP 124 PL + P + +A + +L AL Q++P Sbjct: 70 PLGECFLPYARRAYKELEQSRAAIGELLKPDRGEICIAGLHSVNAYLLPALLAVFRQKHP 129 Query: 125 QATIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVW 183 ++L + + + VD H + L+ + V Sbjct: 130 GTQLRLTSLGSERIIKVLLDRLVDAAILMGPVH----------SPELVSTPLYEEELVVL 179 Query: 184 LRKDHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 L HP + L P + + AL + +G +A+ L E Sbjct: 180 LPAHHPLARRPSVRLAEVAILPQVVFRDGYAMRTALVQHFRAIGATVDVAVELNTLEAFK 239 Query: 243 FMAAQPDNLLLATAPRYCQYY 263 M Q + +A P + Sbjct: 240 EMVRQ--EVGVAILPLCAVQH 258 >UniRef50_B0UFX9 Transcriptional regulator, LysR family n=1 Tax=Methylobacterium sp. 4-46 RepID=B0UFX9_METS4 Length = 306 Score = 133 bits (336), Expect = 7e-30, Method: Composition-based stats. Identities = 40/245 (16%), Positives = 90/245 (36%), Gaps = 17/245 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +++ LL + L+M+ SV+ AA+R+ ++ +++K++ LF+ L PTP Sbjct: 2 INIRHLLVVNLVMELGSVSAAARRLRISQPSITKTVRMAEQELGISLFLRVGGRLQPTPE 61 Query: 68 MVSMEQNLAEW---MQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYP 124 + + ++ L D+ R + + S + ++ + +P Sbjct: 62 ARLLLPEVRRLSGFVETLKELADQIR--DGRTGRIRIVCNSTVANSVVPEAVARFRALWP 119 Query: 125 QATIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVW 183 T+ + + + ++ + R E D+G + + E L Sbjct: 120 GVTVDVMAYATKEVVERVARNEADLGIADTPVR----------DPELRVEELCEAQMVCV 169 Query: 184 LRKDHPALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 +R DHP + L P I+ + A+ L E +A ++ + + Sbjct: 170 MRADHPLAGHAEVRVSDLLAEPVIAFSEDTVLGRAIREALNERNPRYQVASTINQSTVAC 229 Query: 243 FMAAQ 247 + Q Sbjct: 230 ALVGQ 234 >UniRef50_A3VL76 Putative LysR-family transcriptional regulator n=1 Tax=Rhodobacterales bacterium HTCC2654 RepID=A3VL76_9RHOB Length = 302 Score = 133 bits (336), Expect = 7e-30, Method: Composition-based stats. Identities = 46/279 (16%), Positives = 90/279 (32%), Gaps = 15/279 (5%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 S++ L L L +Q + + ++ AA+ +N+T SA S + + LF + L Sbjct: 4 MSVSRLTLKQLRAIQQVYRTGQISAAAEALNITQSATSVLIRQAETVLGATLFERTTRSL 63 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGL-KFELAAESPLMMIMLNALSKQIYQ 121 +P+ S+ + + + L + + L A + +L ++ Sbjct: 64 APSAAGESVIGLVERILGDLSTLEETIRGLRDLERGRIRLTATPATGLTLLPETVRRFRA 123 Query: 122 RYPQATIKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 YP ++ L + D I D G + + + L SD Sbjct: 124 AYPAVSLILDDCAPDQFYSNIIEQRADFGIGTEPEDKSALDW----------QSLNSDPL 173 Query: 181 CVWLRKDHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFE 239 C+ DHP + P I + ++ L +L + + Sbjct: 174 CIICAVDHPFAERDCVGWRELKDQPLILSRRDYGVRGMVETTLAKLNIRARVVAEVGFLG 233 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPF 278 + +M+A + A P + V L P Sbjct: 234 SAAWMSAC--GIGFAILPGRLARAQPAPGIRSVPLVDPV 270 >UniRef50_C6XSY8 LysR substrate-binding n=12 Tax=Bacteroidetes RepID=C6XSY8_PEDHD Length = 307 Score = 133 bits (336), Expect = 7e-30, Method: Composition-based stats. Identities = 49/317 (15%), Positives = 111/317 (35%), Gaps = 26/317 (8%) Query: 7 TLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTP 66 ++L L Q+L +E KAA+R+ ++ +S+ + ++ F+ LF S + T Sbjct: 4 QIELRHLKYFQVLAEELKFRKAAERLFISQPGLSRQIMQMEEIFNVALFDRSKKKVELTA 63 Query: 67 LMVSMEQNLAEWMQMSNLLLDKPHHQTP-RGLKFELAAESPLMMIMLNALSKQIYQRYPQ 125 + ++ + + + + R + + + ++ L + + YP Sbjct: 64 AGLYLKDEVDFLFNHLETVKRQLDNIGQGRETELRIGFLGSAVQKIVPELVLGLNKEYPG 123 Query: 126 ATIKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 L ++ + + ++D+GF L LP I ++ + + L Sbjct: 124 IQTILDEMPNKMQIELLEKDKLDLGF----------VRLHRLPEGISRHLVQQETFSLVL 173 Query: 185 RKDHPALHQTW-NLDTFLRYPHISICWEQS--DTWALDNVLQELGRERTIAMSLPEFEQS 241 K HP + + F P I E S + ++ ++ G + Sbjct: 174 PKQHPINEFNFKGIAEFSNEPFIFFSSEDSPFYHDLITSICEDHGFRPKVFHRSVNALTI 233 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 + + + LA P QY L + F E + + W K ++ N Sbjct: 234 FKLIEE--GMGLAIVPTSLQYG--------YNLNVRFIELKNIPQRTELYVAW-KASNRN 282 Query: 302 PKIVWLRETIKNLYASM 318 P + + + ++ + Sbjct: 283 PALKNVIKLLRKSIPEL 299 >UniRef50_A3U1I2 Regulatory protein, LysR:LysR, substrate-binding n=1 Tax=Oceanicola batsensis HTCC2597 RepID=A3U1I2_9RHOB Length = 313 Score = 133 bits (336), Expect = 7e-30, Method: Composition-based stats. Identities = 49/318 (15%), Positives = 95/318 (29%), Gaps = 27/318 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +DL L L+ + S++KAA V A+S + KL A F PLFV + G+ PT Sbjct: 1 MDLKQLSYFMLIHEHGSISKAASAAGVVQPALSSQIRKLEAEFGVPLFVRTHRGVVPTSA 60 Query: 68 MVSMEQNLAEWMQMSNLL---LDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYP 124 + Q A L G + ++ L + + L +P Sbjct: 61 GDRIYQLAASITANIADAKQDLSALVEADQVGGRIKVGFPPSLARGIFSPLMTSFTNDFP 120 Query: 125 QATIKLRN-WDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVW 183 + + + + + G +D + +++D + Sbjct: 121 NVKVTMMEAFSGTLTEWVIDGRIDFAIGAVPLDV----------AGLRQRKIYTDNIVLI 170 Query: 184 LRKDHPALHQTW---NLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQ 240 P + LD I S + L+E + + Sbjct: 171 --SGQPIAGKQLEPCRLDNIPGLKLILPSEAHSFGAVVRKYLEEGRIVADSTVEVDGASG 228 Query: 241 SLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 + +A D L +C + L + + P+ E + LL+ ++ Sbjct: 229 GIALARSTDWAGLCP---FCAVHGDLRRNQIYVNPIAAPELKW-----DLYLLYDEKRPL 280 Query: 301 NPKIVWLRETIKNLYASM 318 ++ A + Sbjct: 281 TAAAHRFIAMVERELAEL 298 >UniRef50_A4T9R9 Transcriptional regulator, LysR family n=8 Tax=Corynebacterineae RepID=A4T9R9_MYCGI Length = 303 Score = 133 bits (336), Expect = 7e-30, Method: Composition-based stats. Identities = 46/269 (17%), Positives = 84/269 (31%), Gaps = 13/269 (4%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L +++E T+AA R V AVS + +L PL + + T Sbjct: 1 MELRQLEYFVAIVEEGGFTRAASRERVAQPAVSAQIRRLERSVGQPLLTRTSREVRLTRA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQAT 127 ++ + + L + + L + + +P Sbjct: 61 GEALLPHARAALAAVRDGRAAVDDVAGLLRGSVAIGTVTLHPMNVAHLIAEFHADHPDVE 120 Query: 128 IKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRK 186 I L D L + G +D+ + ++ V+ + + Sbjct: 121 ITLGTATSDVLIAELGDGRLDLAI--------VSIAVDEDLPGLEVAVITDEAVEAAVAD 172 Query: 187 DHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMA 245 HP H+ +L+ R+P IS+ LD G IA + +A Sbjct: 173 GHPLAHRRSLSLEQLSRHPLISLPAGTGLRTRLDTACAAAGLRPRIAFEATSPAELAELA 232 Query: 246 AQPDNLLLATAP-RYCQYYNQLHQLPLVA 273 L +A P + + LH L L Sbjct: 233 RH--GLGVAILPQSMARGGSGLHALRLAP 259 >UniRef50_A9BXG3 Transcriptional regulator, LysR family n=218 Tax=cellular organisms RepID=A9BXG3_DELAS Length = 354 Score = 133 bits (336), Expect = 7e-30, Method: Composition-based stats. Identities = 38/217 (17%), Positives = 75/217 (34%), Gaps = 14/217 (6%) Query: 24 SVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLS-PTPLMVSMEQNLAEWMQMS 82 S+T+ A ++ + VS+ + +L +F+ + L+ TP ++ + M + Sbjct: 60 SLTEVAHTLHTSQPGVSRQIRELEEELGVEIFIRAGKRLTGLTPPGEALLPIVERLMLEA 119 Query: 83 NLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQIYQRYPQATIKLRNWDYDSL-DA 140 + L + + +AA L + + QRYPQ + L + + Sbjct: 120 DNLRRVGADFSASEQGRLSIAATHSQARYALPHVVRDFRQRYPQVRLHLHQGSPEQVAQM 179 Query: 141 ITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPAL--HQTWNLD 198 + GE DIG + + V + HP L Q L+ Sbjct: 180 LRSGEADIGVATEALAGYEGLVALPCYRWTHG---------VVVPPGHPLLQSQQALTLE 230 Query: 199 TFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSL 235 R+P I+ + +D G E + ++ Sbjct: 231 ALSRFPIITYEQGYTGRAHIDEAFAREGLEPDVVLTA 267 >UniRef50_Q0JZR1 Transcriptional regulator, LysR-family n=8 Tax=Proteobacteria RepID=Q0JZR1_RALEH Length = 311 Score = 133 bits (336), Expect = 7e-30, Method: Composition-based stats. Identities = 57/312 (18%), Positives = 101/312 (32%), Gaps = 21/312 (6%) Query: 10 LNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMV 69 L + + AA +V+ SA++ ++ L LF P G++ T Sbjct: 17 LRQFRYFVAAAETGQFSMAATAEHVSQSAITNAVLALEQRLAVRLFERRPHGVTLTAEGH 76 Query: 70 SMEQNLAEWMQMSNLLLDKPHHQTP-RGLKFELAAESPLMMIMLNALSKQIYQRYPQATI 128 Q+ + + L +P Q LAA ++ L L + YP + Sbjct: 77 LFFQHARQILDSVEDALREPRFQVHGLQGSVRLAASYTVLGYFLPGLLARFRTNYPDIEL 136 Query: 129 KLRNWD-YDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKD 187 L + D D A+ GE+++G + + R P L +W Sbjct: 137 DLLDMDRPDIERAVLAGEIELGIALLSNLER--------PQRFQRHTLMRSRRQLWTSSS 188 Query: 188 HPALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAA 246 HP L + +L YP+I I ++++ L + +A E + A Sbjct: 189 HPLLAVERPSLRDIAAYPYILITVDEAEESTL-RYWRSHRLAPKVAFRTGSMEALRGLVA 247 Query: 247 QPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHK-RNSHNPKIV 305 + L + A P+ ++ +LW R P Sbjct: 248 H--GFGVTVLSDMVYRPWSLEGKQIEARPIA-----NAVPDMEVGMLWQPGRKLGKPADA 300 Query: 306 WLRETIKNLYAS 317 LRE + + S Sbjct: 301 -LREFLIHACGS 311 >UniRef50_A6SXB4 Transcriptional regulator, LysR family n=1 Tax=Janthinobacterium sp. Marseille RepID=A6SXB4_JANMA Length = 302 Score = 133 bits (336), Expect = 7e-30, Method: Composition-based stats. Identities = 42/273 (15%), Positives = 86/273 (31%), Gaps = 13/273 (4%) Query: 7 TLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTP 66 + L L + + T AA+ + V+ S++S + L LF L T Sbjct: 2 NITLRQLRAFVTVAETGKFTLAAELLGVSQSSLSLLVRDLENLLGLRLFDRHTRRLELTD 61 Query: 67 LMVSMEQNLAEWMQMSNLLLDKPHH-QTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQ 125 + + + +++ + + +AA S ++ L K +RYP Sbjct: 62 AGHDLLPVAQKTLMDLLSVVENSRDLLALKKGRVTIAAGSLHAATVIPDLLKSFNRRYPG 121 Query: 126 ATIKLRNWDYDSLDAI-TRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 + + + + + G VD+G ++ +V+ D V + Sbjct: 122 IRVIVEDVAERQVRELIVAGTVDVGIGMTLDG----------DNSMLAQVIGRDKYAVLM 171 Query: 185 RKDHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 K+H + +T I + LD L +G T A + Sbjct: 172 HKEHQLMRKKTITWQDIAATQPILLKPPSLIRTYLDQHLARVGITLTPAYEVALPWTMTG 231 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPL 276 M + + T +L ++ P+ Sbjct: 232 MVRAGVGVAIVTTGVLPVAERMGLELRTISAPV 264 >UniRef50_Q1N6N4 Transcriptional regulator, LysR family protein n=1 Tax=Bermanella marisrubri RepID=Q1N6N4_9GAMM Length = 300 Score = 133 bits (336), Expect = 7e-30, Method: Composition-based stats. Identities = 46/280 (16%), Positives = 96/280 (34%), Gaps = 22/280 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +D L + + S ++AA R+++T AVSK +A L D LF P + TP Sbjct: 1 MDTQSLQAFIAVAETESFSQAAHRLHLTQPAVSKRIAMLEDTLDCQLFDRLPRKATLTPA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 ++ + + + + + + + L + ++ + YPQ Sbjct: 61 GEALMPKAKHIVSELLEIKTELASLSGDVSGTLRIGTSHHIGLHHLPHILRKFHSTYPQV 120 Query: 127 TIKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + ++ ++ +A+ GE+DI F+ +D + ++ D Sbjct: 121 KLAMQFLGSEAACEALANGELDIAFATLPLEQ---------DPKLDMQAIWRDPLTFVCS 171 Query: 186 KDHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRE---------RTIAMSL 235 HP Q +L ++ I ++ ++ R + Sbjct: 172 HTHPLSKQKNIHLKDLTQHEAILPEPNTVTFEIIEAAFKKEKLSLQAALPSRYRETISMM 231 Query: 236 PEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALP 275 + +++ M A L A P + L +L L P Sbjct: 232 SSYMETIKMMA-SVGLGWAVLPDHMAQDKDLIRLNLGIHP 270 >UniRef50_C4U8I2 LysR-family transcriptional regulatory protein n=2 Tax=Yersinia RepID=C4U8I2_YERAL Length = 290 Score = 133 bits (336), Expect = 8e-30, Method: Composition-based stats. Identities = 48/308 (15%), Positives = 101/308 (32%), Gaps = 37/308 (12%) Query: 19 LMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSMEQNLAEW 78 +++ +V+ A+R++++ SAVS L KLR ++DP+ G+ PT L + + + Sbjct: 1 MVETGTVSLTAERLDMSISAVSVVLNKLRKHYNDPIMFRGGKGMQPTALTLELYKIFKPA 60 Query: 79 MQMSNLLLDKPHHQTP---RGLKFELAAESPLMMIMLNALSKQIYQRYPQAT------IK 129 ++M + ++K + + S + +L + Q P + + Sbjct: 61 LEMMDSGVNKTALLNEKGVAMRTVRIRSSSLVEFWLLGCMM----QHPPDSHAVSYEFLS 116 Query: 130 LRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHP 189 + ++ + R ++DI + + I LF + R+DHP Sbjct: 117 NQPSGQKRIELLRRRQIDIDIGFSLENDSA----------IQRYPLFESGSVLVCRRDHP 166 Query: 190 ALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELG----RERTIAMSLPEFEQSLFMA 245 + + + Q + L RT F L Sbjct: 167 RIKAAVTFEELKAEELLGWILPQDAVEK-EQYLVSFDDIYTVHRT--YRSTSFTNLLMHT 223 Query: 246 AQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIV 305 A D ++ AP + + L V + ++ HK +P + Sbjct: 224 AHSDAVMFVPAP-FAPQMCAMLPLRTVK------TAFLDSSKLSIYAHIHKAQKADPVLQ 276 Query: 306 WLRETIKN 313 + Sbjct: 277 HIIGLFSQ 284 >UniRef50_Q46P28 Transcriptional regulator, LysR family n=1 Tax=Ralstonia eutropha JMP134 RepID=Q46P28_RALEJ Length = 316 Score = 133 bits (336), Expect = 8e-30, Method: Composition-based stats. Identities = 41/315 (13%), Positives = 105/315 (33%), Gaps = 21/315 (6%) Query: 7 TLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTP 66 + L L + Q RS ++AA+R+ V A+S++++ L LF G+ +P Sbjct: 2 NITLRQLRYFVEIAQSRSFSRAAERLRVAQPALSQNISSLEDSLGAKLFERHARGVEISP 61 Query: 67 LMVSMEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQIYQRYPQ 125 + + + + ++ L D + L+ + ++ L + + YP Sbjct: 62 AGERLLTSAIDILARTDALKDDIDGRASLPTGSVRLSIAGSIAGAVIAPLLGAVAREYPG 121 Query: 126 ATIKLR-NWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVW- 183 + +R + ++S + G+ + S + + L+ + ++ Sbjct: 122 IEVTVRESMSFESRALVESGQAHLALMPSPSEIQGMASIP----------LYEERFMLYG 171 Query: 184 LRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 R +T P + ++ +GR + L + + Sbjct: 172 TRAAMRRKPETMTFAEVAELPLAAPDGAHDLRKIIERAANAIGRSLDVRYELNSPQMLIA 231 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 +A ++ + +V P+ + + + L+W +P Sbjct: 232 LARDGLAYVVMPPSACLEAVAAKS---IVGRPVTEPDLTRIQ-----ALVWPGDRPLSPA 283 Query: 304 IVWLRETIKNLYASM 318 +R+ I ++ + Sbjct: 284 AAAIRDLIAHIVGDL 298 >UniRef50_C6VMS1 Transcription regulator n=11 Tax=Firmicutes RepID=C6VMS1_LACPJ Length = 301 Score = 133 bits (336), Expect = 8e-30, Method: Composition-based stats. Identities = 49/318 (15%), Positives = 113/318 (35%), Gaps = 27/318 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L+ L L + + T+ AK +++T +++K++ L A + LF + ++ TP Sbjct: 1 MNLDHLRYFVALSRTENYTQTAKLLHITQPSLTKAIHSLEAELNIDLFQKAGRSVTLTPA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQAT 127 ++ + + + + + +AA L + L ++++ Q P A Sbjct: 61 GKVFASDVESALLLLDKSVTNIKRFDQQKAPIRIAALRTLSIKWLPDIAQRFLQLSPHAA 120 Query: 128 IKLR-----NWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCV 182 ++ + D L+ + + D+ F + H E + Sbjct: 121 VQFQFNTDTGLSPDILNGLRNNKYDVAFCSKMDHFSDIEFFP----------VAEQTMVC 170 Query: 183 WLRKDHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQS 241 HP + NL L YP I+ + + + G + A ++ E + Sbjct: 171 ITPTTHPLANRSSINLAETLAYPQITFSQRSGLHPIMQKLFNDCGGQPISAYAVEEDQAI 230 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 + A +A P + L +P+ +PL F Q+ H+ Sbjct: 231 AGLVAS--GFGIAVVP----NMSILQTMPVKIIPLSFPTWQRILYMGTLK---HRTPQ-- 279 Query: 302 PKIVWLRETIKNLYASMA 319 P + +++ +++ Sbjct: 280 PAVEEFITFVRDQSKTLS 297 >UniRef50_C5BEX8 Transcriptional regulator, LysR family n=12 Tax=Enterobacteriaceae RepID=C5BEX8_EDWI9 Length = 312 Score = 133 bits (336), Expect = 8e-30, Method: Composition-based stats. Identities = 53/303 (17%), Positives = 101/303 (33%), Gaps = 24/303 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +D+ L ++++ S T+AA+++ VT +SK L L L + GL T Sbjct: 1 MDVRTLRYFVEVVRQHSFTRAAEKLFVTQPTISKMLRNLEEELGCTLLIREGRGLRLTDS 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQ-TPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + Q + L + + +L + + L + QRYP Sbjct: 61 GNVVYQRAQTILDQFGQLRTELDDLGALKKGSLKLGIPPMVGTQ-MAGLIGEFRQRYPGI 119 Query: 127 TIKLRNWDYDSLDA-ITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + + + +++ + GE+D+ + + P AI LFS V L Sbjct: 120 ELHIAEFGGLTVEQAVLSGELDLALTALSAQP---------DPAIASLPLFSHPLYVLLP 170 Query: 186 KDHP-ALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 + P + + + + + L G + IA+ +++ M Sbjct: 171 RQAPWLTRSALGMTDLAQQNILLYNEDFALYQQLMQAFSAAGVKPQIAVRSGQWDFLAAM 230 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLW-HKRNSHNPK 303 + + P +L L+ LPL L L+W H R + Sbjct: 231 VQAGVGIAILPQP----ICQRLDPHSLLWLPLA------PTLMWRLGLIWCHGRYLSHSA 280 Query: 304 IVW 306 W Sbjct: 281 QAW 283 >UniRef50_O68014 HTH-type transcriptional regulator benM n=12 Tax=Acinetobacter RepID=BENM_ACIAD Length = 304 Score = 133 bits (336), Expect = 8e-30, Method: Composition-based stats. Identities = 47/296 (15%), Positives = 103/296 (34%), Gaps = 20/296 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L +++E+S TKAA ++ + +S+ + L L + TP Sbjct: 1 MELRHLRYFVAVVEEQSFTKAADKLCIAQPPLSRQIQNLEEELGIQLLERGSRPVKTTPE 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQAT 127 Q + + + ++ + L+ +L + Q +P Sbjct: 61 GHFFYQYAIKLLSNVDQMVSMTKRIASVEKTIRIGFVGSLLFGLLPRIIHLYRQAHPNLR 120 Query: 128 IKLRNWDYDS-LDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRK 186 I+L + +A+ G +D GF L AI +L ++ V + Sbjct: 121 IELYEMGTKAQTEALKEGRIDAGFGR----------LKISDPAIKRTLLRNERLMVAVHA 170 Query: 187 DHPALH---QTWNLDTFLRYPHISI--CWEQSDTWALDNVLQELGRERTIAMSLPEFEQS 241 HP + +L+ + + + + + + N+ + G E T + E + + Sbjct: 171 SHPLNQMKDKGVHLNDLIDEKILLYPSSPKPNFSTHVMNIFSDHGLEPTKINEVREVQLA 230 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVAL----PLPFDESQQKKLEVPFTLL 293 L + A + + L A L +PL+ P+ ++ ++L Sbjct: 231 LGLVAAGEGISLVPASTQSIQLFNLSYVPLLDPDAITPIYIAVRNMEESTYIYSLY 286 >UniRef50_Q5FUF1 Transcriptional regulator n=2 Tax=Acetobacteraceae RepID=Q5FUF1_GLUOX Length = 316 Score = 133 bits (335), Expect = 9e-30, Method: Composition-based stats. Identities = 48/266 (18%), Positives = 85/266 (31%), Gaps = 20/266 (7%) Query: 13 LLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSME 72 L + Q S AAK I +T SA+S + +L F LF + ++ T ++ Sbjct: 25 LKTFVIAAQMESFAAAAKAIGLTQSAISAQIRRLEEEFGYDLFERTGRSVTLTRAGNTIL 84 Query: 73 QNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQATIKLRN 132 + + + L + A S + +L +++ P +++ Sbjct: 85 SQVEDILSSYE-ALRGVRRPPTDSAPLRIGAISTVQTSLLAPAIARLHLELPDLKVRIVP 143 Query: 133 -WDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPAL 191 LD + GE+D R L + + L + + PA Sbjct: 144 GLSMVLLDRLDAGELDAALIVRPPF--------GLMADMQWHPLVKQDYVMVV----PAH 191 Query: 192 HQTWNLDTFLR-YPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQPDN 250 + N L+ P I LD L+ G + E L M A +N Sbjct: 192 TEHENWRQILQTQPFIRYDSRSFGGRTLDRFLKAQGLAPHQVVETEELHTILQMVA--NN 249 Query: 251 LLLATAPRYCQYYNQLHQLPLVALPL 276 + + P + + LPL Sbjct: 250 MGCSIVPYI---FAVSVVPNIRVLPL 272 >UniRef50_C9LCS7 Putative transcriptional regulator n=1 Tax=Blautia hansenii DSM 20583 RepID=C9LCS7_RUMHA Length = 289 Score = 133 bits (335), Expect = 9e-30, Method: Composition-based stats. Identities = 43/289 (14%), Positives = 95/289 (32%), Gaps = 21/289 (7%) Query: 10 LNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMV 69 L L + + S+T AA+ +N+ AVS ++ +L +++ LF L T Sbjct: 3 LRHLKIFSAVCRLESITLAAEEMNMAQPAVSYAIRELEGYYETKLFERMNRRLYITEAGE 62 Query: 70 SMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQATI- 128 + + + D K + + + L L + Y Q I Sbjct: 63 QLLIYADSILAQFDEARDVLRDIQTVT-KVRVGTNASYGISYLPQLIAGFKEEYGQIPIY 121 Query: 129 KLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDH 188 L + + + R ++D G + S+ P + +D D+ Sbjct: 122 TLVDNSRQIEEKLIRNDLDFGITDYPSN----------PQFFRSVPVGTDKMIAVCSSDY 171 Query: 189 PALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQP 248 + ++ + P + ++ +L + ++ I M + A+ Sbjct: 172 SW-QGSAKMEELIEMPLLLRELGSGSRSMVEALLSKYKKKPEIVMESISIRSLIEACAKG 230 Query: 249 DNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKR 297 +LL T + Y + H L + + + + + ++HK Sbjct: 231 MGVLLLT-KSVLEPYMKSHHLREI-------KITDESIVREYYFVYHKS 271 >UniRef50_A4F849 LysR-family transcriptional regulator n=7 Tax=Actinomycetales RepID=A4F849_SACEN Length = 301 Score = 133 bits (335), Expect = 1e-29, Method: Composition-based stats. Identities = 52/305 (17%), Positives = 96/305 (31%), Gaps = 27/305 (8%) Query: 7 TLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTP 66 +D L+ + +E S+T+AA+R+ V+ A++K + +L A LF S G++PT Sbjct: 2 DVDTRLVRYFAAVAEEGSLTRAAERLYVSQPALTKQIKQLEALLGVRLFTRSRTGMAPTE 61 Query: 67 LMVSMEQNLAEWMQMSNLLLDKP-HHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQ 125 + + + + L + + + + P Sbjct: 62 AGQVLAERAPALLATCDEALRDTKSAARRAARVLRIGFLASAANEPTQDIIARFGVVRPG 121 Query: 126 ATIKLRNWD-YDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 + +R + ++ GEVD + A+ EVL ++ CV L Sbjct: 122 WRVDMRQAAWSEPTAGLSEGEVDAALLRLPFPGQE---------ALRVEVLLTEPRCVAL 172 Query: 185 RKDHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQ---ELGRERTIAMSLPEFEQ 240 +HP P ++ E D L GR I S + + Sbjct: 173 PANHPLATRDAIPFRELWDEPFVAAPPETGAFR--DYWLAADERDGRPPRIGASTDQPDD 230 Query: 241 SLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 L A + +A AP + + P ++W Sbjct: 231 WLQAIA--NGYGVALAPESAARF--------YSRPGVVYRPVIGVSPSRVGIVWPPAADT 280 Query: 301 NPKIV 305 NP + Sbjct: 281 NPVVQ 285 >UniRef50_A3NGA2 Transcriptional regulator n=70 Tax=Proteobacteria RepID=A3NGA2_BURP6 Length = 339 Score = 133 bits (335), Expect = 1e-29, Method: Composition-based stats. Identities = 47/310 (15%), Positives = 108/310 (34%), Gaps = 19/310 (6%) Query: 10 LNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMV 69 L L + +++AA ++ ++ SAV+ ++ +L LFV + G++ T Sbjct: 40 LRQLKYFVATAELGQISQAAIQLTISQSAVTSAIRELEDSLGTQLFVRTASGVALTNTGR 99 Query: 70 SMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQATIK 129 + + + P+ ++ LAA ++ L +++ +YP+ TI+ Sbjct: 100 RFLNQAYTILSSVDEAMRIPNLESTLTGTLALAASYTVLGYFLPHHLMRLHTQYPRLTIQ 159 Query: 130 LRNWDYDSLDA-ITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDH 188 L + +S++ + G D+ + S L P+ L+ + H Sbjct: 160 LHELNRESIEEGLIAGRYDMAV--LLTSNVSNPELVLEPVIHSARRLW-------VGAHH 210 Query: 189 PAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQ 247 P L ++ P + + +++ AL E + + E M A Sbjct: 211 PLLRRESVTFADVAPEPFVMLTVDEAAYTAL-RYWNETPYRPNVILRTSSVEAVRSMVA- 268 Query: 248 PDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWL 307 + +A L + + + + L W + +P + + Sbjct: 269 -NGSGVAILSDMVYRPWSLEGRRIETV-----LLRDPVPPMSVGLAWRRNAEFSPAMHAV 322 Query: 308 RETIKNLYAS 317 RE ++ + Sbjct: 323 REYFRHTFME 332 >UniRef50_A1WHL2 Transcriptional regulator, LysR family n=10 Tax=Proteobacteria RepID=A1WHL2_VEREI Length = 305 Score = 133 bits (335), Expect = 1e-29, Method: Composition-based stats. Identities = 36/271 (13%), Positives = 86/271 (31%), Gaps = 15/271 (5%) Query: 7 TLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTP 66 DL+ + + S AA+ ++++ A+S+ + KL LF + + + Sbjct: 2 NFDLSDMRAFVAVADLGSFRAAAQTLHISQPALSRRVEKLEQAMGFRLFERTTRKVELSA 61 Query: 67 LMVSMEQNLAEWMQMSNLLLDKPHH-QTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQ 125 + S + L + +A + +L + +++P+ Sbjct: 62 IGRSFVPKARHVLSELENALLGMTDMSDRLRGQVTVACVPSSVPHLLAGAVEAFQRKFPR 121 Query: 126 ATIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 ++L + + L A+ R E D G S + ++++ L + + Sbjct: 122 IRVRLIDETATEILLAVVRSEADFGVSYW----------GAQEPDLEFQGLVQEPFVLAC 171 Query: 185 RKDHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 HP + ++ +++ + +D L + L Sbjct: 172 LPGHPLARKRRVKWAELAQHDCVTLPPGTGNRMLIDQALSTVAYPPRWTCEARHVPALLS 231 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVAL 274 + + + PR+ Q L V L Sbjct: 232 LIEA--GVGVGAVPRFAIRGGQGATLASVRL 260 >UniRef50_Q13G76 Transcriptional regulator, LysR family n=1 Tax=Burkholderia xenovorans LB400 RepID=Q13G76_BURXL Length = 322 Score = 133 bits (335), Expect = 1e-29, Method: Composition-based stats. Identities = 44/248 (17%), Positives = 78/248 (31%), Gaps = 12/248 (4%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 + L+L L +L +E +AA VT A+S+ +AKL PLF G+ Sbjct: 9 MKALELRQLRYFAILARELHFGRAADVACVTQPALSQQIAKLEVLVGTPLFARDSRGVML 68 Query: 65 TPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGL-KFELAAESPLMMIMLNALSKQIYQRY 123 T ++ L + L + + + ++ Y Sbjct: 69 TAAGDALRDGLDNVFGQLDRALRAAREAGEDQTFTLSIGLVEYTNLPFVPPALIRLQALY 128 Query: 124 PQATIKLRNWD-YDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCV 182 P I R + A+ GE+D+GF I E L CV Sbjct: 129 PDVMIIRREMNARRQWAALGTGEIDVGFGVPVEQSGRET-------HIGSEDLLDSGWCV 181 Query: 183 WLRKDHPALHQ-TWNLDTFLRYPHISI--CWEQSDTWALDNVLQELGRERTIAMSLPEFE 239 +R+DH + ++ R I + ++ G + I + + Sbjct: 182 LMRRDHRFARRTRLRINELARERLIVPARSVNEPLYDSVRARFVSTGVQPNIVYETTQSQ 241 Query: 240 QSLFMAAQ 247 + + Q Sbjct: 242 VGMALVEQ 249 >UniRef50_Q0C276 Transcriptional regulator, LysR family n=1 Tax=Hyphomonas neptunium ATCC 15444 RepID=Q0C276_HYPNA Length = 316 Score = 133 bits (335), Expect = 1e-29, Method: Composition-based stats. Identities = 50/267 (18%), Positives = 97/267 (36%), Gaps = 13/267 (4%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L + +++ S+T AA R+ +T A+SKSL++L + LF G++ T L Sbjct: 22 MELRQLEHVLAVVETGSLTSAAARVGLTQQALSKSLSRLESDIGGKLFERETRGMALTRL 81 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRGL-KFELAAESPLMMIMLNALSKQIYQRYPQA 126 ++ ++ + + + L + K + + + + +P Sbjct: 82 GETVVEHARDVVASAGRLKSAAAAELGLERGKLVVGLSPIAATTFIGQSVARFAEAHPNL 141 Query: 127 TIKLRN-WDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 I + D D + A+ RG++D+ S R L+ E ++ + R Sbjct: 142 RIDVEAGLDTDFVAALHRGQIDLALSTRTIGQEDSVLV---------EQFTNEPWGIAGR 192 Query: 186 KDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRER-TIAMSLPEFEQSLFM 244 DHP L +L + A++ G R + +L Sbjct: 193 IDHPWLGGARSLADLKGAAWVIGRNTDLLDEAIEEAFAACGLARPQPGIVTTSVLFTLTA 252 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPL 271 D L + CQ++ L L L Sbjct: 253 LMTTDRLAI-LPRSLCQHHTSLMWLDL 278 >UniRef50_C6XZC9 LysR substrate-binding n=1 Tax=Pedobacter heparinus DSM 2366 RepID=C6XZC9_PEDHD Length = 300 Score = 133 bits (335), Expect = 1e-29, Method: Composition-based stats. Identities = 54/313 (17%), Positives = 116/313 (37%), Gaps = 26/313 (8%) Query: 6 TTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPT 65 ++L L+ ++L +E KAA+++ ++ SA+S+ + +L LF S ++ + Sbjct: 6 NQIELRHLVYFKMLAEELHYRKAAEKLFISQSALSQQIKQLEQLIQISLFDRSNKKVALS 65 Query: 66 PLMVSMEQNLAEWMQMSNLLLDKPHHQT-PRGLKFELAAESPLMMIMLNALSKQIYQRYP 124 S+ ++ + + L + + + M +L L K ++ P Sbjct: 66 ESGKSLYKDAVQVLNKVESALTNLELIKIGNTGQLRIGFVASAMQSVLPGLLKNFHKECP 125 Query: 125 QATIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVW 183 +L + + L A+ E+D+GF + + D ++ + + Sbjct: 126 NIKFQLDELNNREQLMALKNEELDLGFMRS----------NHVDAGYDIRSVYKETFSLV 175 Query: 184 LRKDHPALHQT-WNLDTFLRYPHISICWEQSDTWA--LDNVLQELGRERTIAMSLPEFEQ 240 L ++HP +T N+ F P I +QS + + N+ + G IA Sbjct: 176 LPQNHPINAETFINIGQFREEPFILFPNDQSQLYYQQIINLCADQGFAPKIAHRSIHAPT 235 Query: 241 SLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 + + ++ P + + F E ++ +W K+ S Sbjct: 236 IFKLVEY--GMGVSVIPTSLAHTENKE--------IKFIELKKITQRTELYAVW-KKKSQ 284 Query: 301 NPKIVWLRETIKN 313 NP + L E + N Sbjct: 285 NPALPHLLEMLIN 297 >UniRef50_C5CTK1 Transcriptional regulator, LysR family n=1 Tax=Variovorax paradoxus S110 RepID=C5CTK1_VARPS Length = 322 Score = 132 bits (334), Expect = 1e-29, Method: Composition-based stats. Identities = 47/259 (18%), Positives = 99/259 (38%), Gaps = 16/259 (6%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 + L L L CL ++ QER++ +A K + +T AVSK++A+L L + G+ Sbjct: 5 NNFARLKLRHLQCLVMVAQERNLVRAGKALALTQPAVSKTIAELEEIVGRQLLLRRRRGV 64 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLD-KPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQ 121 TP + ++ ++ + L+ + A + +L ++Y Sbjct: 65 ELTPAAEVLVRHAVSALRGLREGMGLAMDQPEADQLRVAVGALPNMAANLLPEAVARLYA 124 Query: 122 RYPQATIKLRN-WDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 +P +++ + + + + +GE+D+ R +S + +E L+S+ Sbjct: 125 SHPALRVRVVSGTNAQLMTQLRQGEIDLVLG--------RLAQASAMADLAFEQLYSEPL 176 Query: 181 CVWLRKDHPA-LHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGR---ERTIAMSLP 236 + +R HP + LD +P + D L G R + + Sbjct: 177 LLVVRPGHPLAARRRPTLDALAAHPLVLPVSGTLIRHTADAFLIAQGMALPSRLVEATDT 236 Query: 237 EFEQSLFMAAQPDNLLLAT 255 F + + + D + A Sbjct: 237 SF--VVGLLQRCDAVWFAP 253 >UniRef50_Q98A96 Nitrogen assimilation control protein n=3 Tax=Mesorhizobium RepID=Q98A96_RHILO Length = 316 Score = 132 bits (334), Expect = 1e-29, Method: Composition-based stats. Identities = 42/316 (13%), Positives = 102/316 (32%), Gaps = 27/316 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +D+ L +++ S TKAA +NV SA+S + +L F L V G+S T Sbjct: 9 VDIRQLRYFVGVVEAGSFTKAAATLNVAQSALSLHVRQLEEGFGTQLLVRERTGVSVTAS 68 Query: 68 MVSMEQNLAEWMQMSN----LLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRY 123 + + ++ L + + + S ++ L + + Sbjct: 69 GDKLLERARNILKEIRLTEAELTNTAASPA---GEVTIGIPSGAARVLSGPLLESVRAEL 125 Query: 124 PQATIK-LRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCV 182 P+ ++K + + + G ++ R + VL + C+ Sbjct: 126 PRVSLKMIEGMTGPLEEWMAAGRFNLAVLYRTADSVG-----------RMTVLAREDLCL 174 Query: 183 WLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 + P ++ +L +P + ++ +V+ + G + + + Sbjct: 175 VVPSGEPPFEESISLADLHAFPLAVPMRNNNVRRSVADVVAQHGCALDVKFEVDSLSTII 234 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 M + + AP Q + V + + L + ++ + Sbjct: 235 NMVIEGKAHSI-LAPSAVQKEASQGLVRTV-------KIVDPVITRSVVLAVNPKDERSA 286 Query: 303 KIVWLRETIKNLYASM 318 + +R+ I + + Sbjct: 287 AVSAVRKLIPKVAREL 302 >UniRef50_C1A9Z7 LysR family transcriptional regulator n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A9Z7_GEMAT Length = 296 Score = 132 bits (334), Expect = 1e-29, Method: Composition-based stats. Identities = 41/313 (13%), Positives = 102/313 (32%), Gaps = 22/313 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +D+ LL + + ++AA+RI + ++S + +L LF G++ T + Sbjct: 1 MDITLLRAFLEVADAGAFSRAARRIGIAQPSLSLQIQRLEQQLGTTLFERHGRGVALTDV 60 Query: 68 MVSMEQNLAEWMQMSNLLLDK-PHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + + + A + +L A +++ R+P A Sbjct: 61 GKGLYPRARRIVDDVRAAEEAVRREVAEGFGSITVGAIPTIAPYVLPAALERLQHRHPGA 120 Query: 127 TIKLR-NWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + LR ++ +D + G +D+ + + + +VL S++ V + Sbjct: 121 RVVLREDYSAVLVDLLREGAIDVAIAALPYDFGT----------LPQDVLGSEMLLVAVP 170 Query: 186 KDHPALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 HPA + P +++ + ++ + M Sbjct: 171 ALHPAARAGKITVAQLQDAPTVTLDPVHCLGEQVAGFCDARQVNPSVVCRSAQLTTVFEM 230 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 + L+ P+ + + +PL LE LW + + + Sbjct: 231 VGA--GMGLSIVPQMAA--AKHNTSRCAVVPLA-----DMALERDIIALWPRDRAPSKVA 281 Query: 305 VWLRETIKNLYAS 317 + + ++ + Sbjct: 282 MTFVDCVRQVVNG 294 >UniRef50_B5I3M3 Transcriptional regulator n=1 Tax=Streptomyces sviceus ATCC 29083 RepID=B5I3M3_9ACTO Length = 306 Score = 132 bits (334), Expect = 1e-29, Method: Composition-based stats. Identities = 51/317 (16%), Positives = 100/317 (31%), Gaps = 28/317 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +DL L + ++ AA+R+ +T A+S+ ++KL L + +S T Sbjct: 1 MDLRRLRYFLAVAEDLHFGHAAERLGITQPALSQQVSKLEMELGATLIERTSRTVSLTEA 60 Query: 68 MVSMEQNLAEWMQMSNLL-LDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + L + + + G + +L ++I P Sbjct: 61 GRDVLGPLRRCVAAYEEARVVARRAPSSGGGVLRIGFPRGESSTVLTPFLRRIAHGAPGI 120 Query: 127 TIKLRNWD-YDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 ++L + A+ GE+D+GF L L + V+ D V + Sbjct: 121 RMELTDVPCERQAVAVREGELDVGF----------MHLPILEPNLTPLVIRRDRLVVVMP 170 Query: 186 KDHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQEL-GRERTIAMSLPEFEQSLF 243 +HP ++ + P I + L G I + E ++ Sbjct: 171 GNHPCAKDRFVDIRSLEEEPFIGVRLRCPAYTDALGTLARHGGFRPRIEIETNGIEATVS 230 Query: 244 MAAQPDNLLLATAPRY-CQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 M A D L +A P Q + + + P D + + +P Sbjct: 231 MVA--DRLGVAIVPGAGVQRHPGVAIRDISPAPHRLDLAFVLHQD-----------QRSP 277 Query: 303 KIVWLRETIKNLYASMA 319 + +R ++ A Sbjct: 278 VLRTMRRVVQEASREKA 294 >UniRef50_Q7WNL3 LysR-family transcriptional regulator n=1 Tax=Bordetella bronchiseptica RepID=Q7WNL3_BORBR Length = 307 Score = 132 bits (334), Expect = 1e-29, Method: Composition-based stats. Identities = 49/277 (17%), Positives = 92/277 (33%), Gaps = 20/277 (7%) Query: 7 TLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTP 66 L L + +++ S+ +AA VT A+SKSL +L A L GL T Sbjct: 2 NLSLRDIEYFLAVIEHGSLGRAATACGVTQPALSKSLQRLEADTGLALLERGGRGLRLTS 61 Query: 67 LMVSMEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNALSKQIYQRYPQ 125 ++ ++ + + + A M + +++ P Sbjct: 62 AGLAFREHAQKLWAQYRDAVRHAMELRVGEAGLLRVGATGATMDAYVMPALQRLLPLRPA 121 Query: 126 ATIKLRN-WDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 ++L D + G +D+ + + A+ +++ D CV Sbjct: 122 LRVQLTQGLSDDLNAQVASGRLDLAVIP---------IYGDIQPALRQDLIAEDGLCVAA 172 Query: 185 RKDHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTI-AMSLPEFEQ-S 241 R+ HP + +L + I ALD + G + A+ + F + Sbjct: 173 RQGHPLAARRKLSLRDLEGHRWILPHPSSVARQALDQRYADAGLQPPPAALEVQHFSSGA 232 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPF 278 L M A+ D L A P+ + LP+ Sbjct: 233 LAMLARSDVL--ALLPQSALQMGAA----IAVLPVAL 263 >UniRef50_C0ADM3 DNA-binding transcriptional regulator CynR n=2 Tax=Bacteria RepID=C0ADM3_9BACT Length = 328 Score = 132 bits (334), Expect = 1e-29, Method: Composition-based stats. Identities = 39/276 (14%), Positives = 89/276 (32%), Gaps = 32/276 (11%) Query: 6 TTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPT 65 +++ LL + + + S T+AA I + +S+ + +L PLF + T Sbjct: 7 DSVEFRHLLYFRAVAEAGSFTRAAAIIGLRQPTLSQQIKQLEDELGAPLFHRARRMCRLT 66 Query: 66 PLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGL-KFELAAESPLMMIMLNALSKQIYQRYP 124 P + + L + +AA L ++ + + +P Sbjct: 67 PAGEMLLPYARRVLGEMENLRHSLDDLSGLRRGSLTVAALPVLSHRVMPLAVARFHAEHP 126 Query: 125 QATIKLRNWDYDSLD-AITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVW 183 +++ D ++ A+ +G V++G +S + ++LF + Sbjct: 127 DIRVRMLEMSVDDMEAALVQGTVEMGIGYMPPAGKS----------LRAQLLFQEELVAV 176 Query: 184 LRKDHPALHQT--------------------WNLDTFLRYPHISICWEQSDTWALDNVLQ 223 +R+D P +++ +R P I++ + N Sbjct: 177 VREDDPLAQGGGGGGGKAARGGRERGDTSRWVSMEALMRRPLIALPPGHGTRTMMLNAFA 236 Query: 224 ELGRERTIAMSLPEFEQSLFMAAQPDNLLLATAPRY 259 + R AM E L + + + + Sbjct: 237 SVRRVARFAMEAGSVEVLLQVVRECGGPGIVPSSAL 272 >UniRef50_C4KR89 Transcriptional regulator, LysR family n=67 Tax=Proteobacteria RepID=C4KR89_BURPS Length = 338 Score = 132 bits (334), Expect = 1e-29, Method: Composition-based stats. Identities = 38/246 (15%), Positives = 74/246 (30%), Gaps = 14/246 (5%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 DL L + S+ +AA ++VT A+S+ L +L PLF G+ T + Sbjct: 37 FDLRQLRAFTTIAASGSLGRAADALHVTQPALSRILKRLEEQIGAPLFERHSKGVQLTAI 96 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTP-RGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 ++ + + ++ ++ A + ++L ++ R+P Sbjct: 97 GEALLPHATLLQHEAEHAREEIDALRGLAKGTIKVGAVGSIASLVLPVALGRVLDRWPNL 156 Query: 127 TIKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + + +D +DA+ E+DI S R ++ V Sbjct: 157 RVVIVEGVWDRLVDALLTHEIDIALSTRVPDTDEVVAIAECRWDDVSH--------VVAA 208 Query: 186 KDHPA---LHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRE-RTIAMSLPEFEQS 241 DHP L + + G IA+ Sbjct: 209 PDHPLRAAARAPLTLADTRAARWAIPPRGTAPFEQMRAAFDAHGLAPPDIAVETRSVTAL 268 Query: 242 LFMAAQ 247 + A Sbjct: 269 KSLVAH 274 >UniRef50_Q1R0R5 Transcriptional regulator, LysR family n=1 Tax=Chromohalobacter salexigens DSM 3043 RepID=Q1R0R5_CHRSD Length = 417 Score = 132 bits (334), Expect = 1e-29, Method: Composition-based stats. Identities = 50/315 (15%), Positives = 105/315 (33%), Gaps = 24/315 (7%) Query: 11 NLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVS 70 L L + + AAKR+ +T AVS +L L LF+ + G+ T Sbjct: 113 RQLTVLVAVADLHNEPLAAKRLGLTQPAVSGNLRDLERLLGIALFLRTQRGMLATDGGAV 172 Query: 71 MEQNLAEWMQMSNLLLDKPHHQTPRGL-KFELAAESPLMMIMLNALSKQIYQRYPQATIK 129 + ++ ++ +L+ D + + +++ + + P + Sbjct: 173 LIRHAKMALRELSLVSDDLSAWQGEVRGRVVIGTLPLSSSLLVPHAVDALLRELPGLNVT 232 Query: 130 LRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDH 188 + YD+L +++ GE+DI S + + LF D V R+ H Sbjct: 233 IIEGTYDALFESLRHGEIDILIGALRQAGTSEDT--------HQQRLFHDRLAVAARQGH 284 Query: 189 PALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRE-RTIAMSLPEFEQSLFMAA 246 P + L L I+ + + + G + ++ + + Sbjct: 285 PLMKHAALQLSDLLDAQWIAPRQGTPARVSFEQEFRSAGLQPPSVVVESGNLSTIRTLLL 344 Query: 247 QPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP--KI 304 D + L + Q + ++ L LP+ + + R +P + Sbjct: 345 DSDRVTLVSPH---QVFFEVQSGQLALLPIKLTGTLRPIGITT-------RADDSPTQAL 394 Query: 305 VWLRETIKNLYASMA 319 L++ + L MA Sbjct: 395 KVLKDILLTLGERMA 409 Score = 65.4 bits (159), Expect = 2e-09, Method: Composition-based stats. Identities = 13/70 (18%), Positives = 29/70 (41%) Query: 13 LLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSME 72 L + + + SV +AA+ ++++ AV++++ L LF G+ T + Sbjct: 18 LRAVIAVAEAGSVMRAAEALHLSQPAVTRAVRDLEKELGLALFERHRSGMLCTTAGKIVL 77 Query: 73 QNLAEWMQMS 82 +Q Sbjct: 78 HRFRRALQQL 87 >UniRef50_A6WFB8 Transcriptional regulator, LysR family n=1 Tax=Kineococcus radiotolerans SRS30216 RepID=A6WFB8_KINRD Length = 307 Score = 132 bits (334), Expect = 1e-29, Method: Composition-based stats. Identities = 38/245 (15%), Positives = 76/245 (31%), Gaps = 14/245 (5%) Query: 7 TLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTP 66 ++L L +++ +++ AA+R+ S VS + L LFV + PT Sbjct: 4 RVELRQLEVFLAVVEAGTISAAARRLGTAQSVVSTVVRALEEDLGAGLFVRTSRRAVPTD 63 Query: 67 LMVSMEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQIYQRYPQ 125 ++ + + + + + + L L ++ +P+ Sbjct: 64 AGRALVPEARRLLAGVSQARAAVRGAEEGPTGPVAVGVVTTMHPVDLPRLLQRFTAEHPR 123 Query: 126 ATIK---LRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCV 182 ++ + L A+ GE+D F P P A+ L + Sbjct: 124 VSVSMRVFADGSRGLLRALVEGELDAAFLSWPFRP---------PGAVALRPLVRAPLRL 174 Query: 183 WLRKDHPALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQS 241 L HP L I + +D V + G R + + +P+ Sbjct: 175 LLPAGHPLASPGPVELADLAGERWIDGPPGFGNRLQVDAVFERAGARRHVVLEVPDVSTF 234 Query: 242 LFMAA 246 A Sbjct: 235 PRYVA 239 >UniRef50_UPI0001C36FDC transcriptional regulator, LysR family protein n=1 Tax=Ruminococcus flavefaciens FD-1 RepID=UPI0001C36FDC Length = 293 Score = 132 bits (334), Expect = 1e-29, Method: Composition-based stats. Identities = 37/219 (16%), Positives = 84/219 (38%), Gaps = 16/219 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +D+ +L + +E+S + AA+R+ ++ +S+ + +L L + S G++ T Sbjct: 1 MDIRVLKYFLAVAREQSFSVAAERLFLSQPTLSRQIKELEDELGTQLLIRSSKGVTLTEE 60 Query: 68 MVSM---EQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYP 124 + + + + E + + + K + A + ++ ++K++ YP Sbjct: 61 GMILRARAEEITELLDKTEQEVRKSGE--QVSGMVYIGAGETYAIKLIADIAKKLNADYP 118 Query: 125 QATIKLRNWD-YDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVW 183 + + D D L+ + RG +D G + + D V Sbjct: 119 DIQYSIYSADASDVLEKLDRGLLDFGIVFQNVDTSKYNSVPLPQK---------DTFGVL 169 Query: 184 LRKDHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNV 221 +RKD P ++ +L P I ++ LD + Sbjct: 170 MRKDSPLAQKESISLSDLKGQPLIIPRQPNHNSMFLDML 208 >UniRef50_B2I0F8 Transcriptional regulator n=13 Tax=Acinetobacter RepID=B2I0F8_ACIBC Length = 293 Score = 132 bits (334), Expect = 1e-29, Method: Composition-based stats. Identities = 31/268 (11%), Positives = 85/268 (31%), Gaps = 15/268 (5%) Query: 10 LNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMV 69 L L L + + A+ ++++ SA+S ++ L LF + + T Sbjct: 3 LKQLKAFLALARTLNYANASLELHLSQSALSLTIKSLEEELGGKLFNRNTRRVELTQEGK 62 Query: 70 SMEQNLAEWMQMSNLLLDKP-HHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQATI 128 S+ + + + + + +A+ + +L + Q +P Sbjct: 63 SLIPYAKKLLANWDEMENDVKQRFKLNRGTLSIASMPFVTHAILPEVIHQFLAVHPNLNF 122 Query: 129 KLRNWDYDS-LDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKD 187 + + ++ ++ + G ++G L ++++ LF + L K Sbjct: 123 SIHDIPNETIIEKVQDGIFELGICFEP----------DLTEGLEFKPLFEEDFLALLPKS 172 Query: 188 HPALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAA 246 HP + P +++ + ++ + + + A Sbjct: 173 HPLAQSSSITWHELCSNPFVTLQKPSIVRYLVEQNCLRNNITLDLKVECHQISSLSSFVA 232 Query: 247 QPDNLLLATAPRYCQYYNQLHQLPLVAL 274 + ++ PR+ + L+ L Sbjct: 233 Y--GIGVSAIPRHFAKHIDKEHNVLIDL 258 >UniRef50_A1TIM2 Transcriptional regulator, LysR family n=2 Tax=Acidovorax RepID=A1TIM2_ACIAC Length = 308 Score = 132 bits (333), Expect = 2e-29, Method: Composition-based stats. Identities = 40/270 (14%), Positives = 84/270 (31%), Gaps = 13/270 (4%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L + + +T++A + VT S +S L +L A PLF GL + Sbjct: 1 MELRQLRYFLSVAETEHLTQSADALFVTQSTLSHGLRQLEAELGLPLFDRLGRGLKLSQA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNALSKQIYQRYPQA 126 ++ + A +Q + + ++ YP Sbjct: 61 GMAFRSHAARALQELEAGRMALADMAGLQAGTLTVGVIPTFLTHLVPDAVAAFSADYPGV 120 Query: 127 TIKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + +R+ + + + G +D+G S +H I+ E LF + + + Sbjct: 121 QVVVRDLRGGPIEEQLIAGRLDVGISFHPAHRE----------EIEAEPLFEERLQLVVH 170 Query: 186 KDH-PALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 H A +T P + + +D + G + + + + L Sbjct: 171 AGHALARRRTLRTRELAGVPLALLPRSFATRRMIDAAFAQAGVVPVVRVEMESVDALLHA 230 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVAL 274 +A Q + + L Sbjct: 231 CRGGPLATIAAERAAGQAGPDMRAITLTEP 260 >UniRef50_C9YBM2 Putative uncharacterized protein n=2 Tax=cellular organisms RepID=C9YBM2_9BURK Length = 309 Score = 132 bits (333), Expect = 2e-29, Method: Composition-based stats. Identities = 52/326 (15%), Positives = 100/326 (30%), Gaps = 29/326 (8%) Query: 1 MKKSITTLDLNL----LLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFV 56 M L + L L + +E KAA R++++ +S+ + +L LF Sbjct: 2 MPIDTKKLSMRLETRQLRYFVAVAEELHFGKAAVRLHMSQPPLSQQIRQLEEGLGVTLFE 61 Query: 57 NSPLGLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKF-ELAAESPLMMIMLNAL 115 + + T + +D F + ++ ++ Sbjct: 62 RTQRSVKLTYAGQVFLAQARNALSKLEEAVDVVRAAARGEAGFLRCGYTAASAYAVIPSV 121 Query: 116 SKQIYQRYPQATIKLR-NWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEV 174 QRYP + LR + D I G +DIG + E Sbjct: 122 MHAFKQRYPLVEVALRESLSGDQYRDIREGRLDIGLVRPFGAL----------PDLATEK 171 Query: 175 LFSDVPCVWLRKDHPALHQTW-NLDTFLRYPHISICWEQSD--TWALDNVLQELGRERTI 231 L + V + +HP Q ++ P + S ++N+L + Sbjct: 172 LIEENLIVAIPSEHPLAQQRIVDIHDLQSQPFVGFSSYGSQYFHDMVENLLGGEKVVPKL 231 Query: 232 AMSLPEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFT 291 + + + L LA P ++H +V PL + Sbjct: 232 VQRATQPHAVIALV--SAGLGLAIVP---DASARVHMDRVVYRPL----HASRLPRPELH 282 Query: 292 LLWHKRNSHNPKIVWLRETIKNLYAS 317 L W +R + +P I + + + + A Sbjct: 283 LCW-RRENISPLISNFKASAREVAAQ 307 >UniRef50_B8CT07 Regulatory protein, LysR n=1 Tax=Shewanella piezotolerans WP3 RepID=B8CT07_SHEPW Length = 358 Score = 132 bits (333), Expect = 2e-29, Method: Composition-based stats. Identities = 37/258 (14%), Positives = 89/258 (34%), Gaps = 11/258 (4%) Query: 1 MKKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPL 60 M K I+ LD L L+ ++ + A ++N + S VS++LA +R D LFV Sbjct: 1 MLKQISRLDYFTLQVFIGLVDLKNGSAVAAKLNTSQSKVSRALATMRDVLGDELFVRQKY 60 Query: 61 GLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIY 120 GL P + + + + ++ + +++ + + AA + +LN + + Sbjct: 61 GLEPNQVALKITPMVRTILEQLDKIIETTLDKKDAPYELTFAANEHWSLAVLNCIQQSCR 120 Query: 121 QRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 + ++ W + +G++D S + ++ Sbjct: 121 CVTGGVYVNVQPWSETVSQRLCQGKIDCSISIEPVNHPMVTDTKIGDIS---------HF 171 Query: 181 CVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDT--WALDNVLQELGRERTIAMSLPEF 238 + + HP + L Y + ++ Q + + + P Sbjct: 172 FIVAKTGHPIFSASEPLKAIFDYKIALVNSNLQSHQLHRIEEYAQVEDIDIKVVLKSPSV 231 Query: 239 EQSLFMAAQPDNLLLATA 256 + + D++ + + Sbjct: 232 RMVVDHVSMTDDVAILVS 249 >UniRef50_C9PFK4 Transcriptional regulator substrate-binding of LysR family protein n=1 Tax=Vibrio furnissii CIP 102972 RepID=C9PFK4_VIBFU Length = 304 Score = 132 bits (333), Expect = 2e-29, Method: Composition-based stats. Identities = 47/308 (15%), Positives = 88/308 (28%), Gaps = 29/308 (9%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L L + TK A ++N+ SA+S S+ KL L + + T Sbjct: 1 MELKRLQYFVALAANGNFTKTADQLNIAQSALSVSMQKLEKEIGLKLINRTNRQIQLTSD 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRGL-KFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + + ++ L + K + + L + YP Sbjct: 61 GMRLLFHARRILEDVALAEIEMDELKGLERGKIDFGVSAMLGSYFFPEALAAFTETYPNI 120 Query: 127 TIKLRNWDYDSLD-AITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 I ++ +L+ + G +D+ F + ++ P + + Sbjct: 121 RIHIQEHGTATLEKMLLEGALDLAFVRTDQPLEQLRYVALCP----------EEIVACVN 170 Query: 186 KDHPALHQ-TWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 K HP + +L+ F + P I A+ + I E + Sbjct: 171 KSHPFAQRSEVSLEQFCQQPLILFRDGYLLREAISRYCRNNNITPDIRYETNLIELVKAL 230 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLL----------- 293 + D + R L V P + L Sbjct: 231 LKK-DIGISTCLRRIIH---DNEPLVCVPFNPPIKVEFGIGWKSSHYLSNAARAFLKFME 286 Query: 294 -WHKRNSH 300 WHK N H Sbjct: 287 DWHKTNHH 294 >UniRef50_A8FC52 LysR family transcriptional regulator n=4 Tax=Bacillus RepID=A8FC52_BACP2 Length = 291 Score = 132 bits (333), Expect = 2e-29, Method: Composition-based stats. Identities = 43/265 (16%), Positives = 89/265 (33%), Gaps = 27/265 (10%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 +I ++ + Q S+ KAA+ + +T +VS + L D LF L Sbjct: 1 MNIENIE-----AFIYVCQLGSINKAAEALYLTQPSVSARIQSLEKELDLKLFDRQRNKL 55 Query: 63 SPTPLMVSMEQNLAEWMQMSNLL---LDKPHHQTPRGLKFELAAESPLMMIMLNALSKQI 119 S T + + + L + + + S + +L + + Sbjct: 56 SLTEKGEQFYPHAKKILHSYQEAKHSLKQTMIP----YELTIGCASSISNNLLPNILPAL 111 Query: 120 YQRYPQATIKLRN-WDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSD 178 ++Y +K+ D + + +VD G + + I+ +FSD Sbjct: 112 KEKYENLKVKIVTGHSKDVVQKVINNQVDFGI-----------VRTETHPQIESIPIFSD 160 Query: 179 VPCVWLRKDHPALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPE 237 +++ HP N+ P I + D L + Q+ I++ + Sbjct: 161 PIGLFVPTYHPLASLDNINMKELEEQPFIFFDYGSFDWLMLHRLFQKNNITPNISIEVDH 220 Query: 238 FEQSLFMAAQPDNLLLATAPRYCQY 262 E + + Q + L+ P +C Sbjct: 221 METAKNLVLQ--GMGLSFLPHHCVR 243 >UniRef50_B0TM59 Transcriptional regulator, LysR family n=2 Tax=Shewanella RepID=B0TM59_SHEHH Length = 308 Score = 132 bits (333), Expect = 2e-29, Method: Composition-based stats. Identities = 32/251 (12%), Positives = 80/251 (31%), Gaps = 12/251 (4%) Query: 6 TTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPT 65 + + + + + M +VT AA+ + ++ AVS+ L++L PLF+ + L T Sbjct: 5 SKIKIRQIEAFRCFMLSGTVTGAAELLYISQPAVSRLLSELEYRVGFPLFIRTHNKLEAT 64 Query: 66 PLMVSMEQNLAEWMQMSNLLLDKPHHQTP-RGLKFELAAESPLMMIMLNALSKQIYQRYP 124 P +++ N L + + + + +P Sbjct: 65 PEAKLFYKDVNRVFVGMNSLTSSADAIARNNQGRLRIGVMPICSNSFMPDVIAAFLSLHP 124 Query: 125 QATIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVW 183 +I+L + L+ + +DI + L V Sbjct: 125 NVSIELESASRIQLLEMVRSHRIDIAITTNVEADE---------DEFSCRFLRRHRAVVL 175 Query: 184 LRKDHPALHQ-TWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 L + HP + + + +++ + +++ + +R I + E Sbjct: 176 LHEGHPLAQKSSLSPIDLKHERFMTLAYGSPFRTRVEDAFLKQSVKRNIILEAREQSTLF 235 Query: 243 FMAAQPDNLLL 253 + + + + Sbjct: 236 QLVRKGVGIAI 246 >UniRef50_Q67NJ1 LysR family transcriptional regulator n=1 Tax=Symbiobacterium thermophilum RepID=Q67NJ1_SYMTH Length = 311 Score = 132 bits (333), Expect = 2e-29, Method: Composition-based stats. Identities = 48/274 (17%), Positives = 92/274 (33%), Gaps = 19/274 (6%) Query: 10 LNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMV 69 L L +++E S T+AA+ +N+T +V+K + L + LF + TP+ Sbjct: 13 LQHLTTFCRVVEEGSFTRAAQVLNLTQPSVTKQVGALEDYLQVQLFTRQGKRVHLTPVGE 72 Query: 70 SMEQNLAEWMQMSNLLLDKPHHQ-TPRGLKFELAAESPLMMIMLNALSKQIYQRYPQATI 128 + + + + + +P + + + L L + +P+ I Sbjct: 73 LVYDYARQVIHLVQRCEEAVREYRSPGSGSVTVGCVHTIGLFTLPELLAAYVREHPRVKI 132 Query: 129 KLRN-WDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL--- 184 ++ + +++ + GEVD+G E++ LF D V Sbjct: 133 NVKTGNNRETVTMLLHGEVDVGLVTTPQVHERIEVVP----------LFEDPLVVVAGPS 182 Query: 185 -RKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 D P + + + P I D VL+E+G + M E Sbjct: 183 FAADLPPV---VSNADLAQLPFIGYVRGARFRMTTDQVLEEMGIQPQFVMEFDNHEAIKT 239 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLP 277 M A + L + + L LP Sbjct: 240 MVALGFGIALEPVSAVQRELISGQLVRLNVPGLP 273 >UniRef50_A0R7B5 LysR-family protein transcriptional regulator n=4 Tax=Mycobacterium RepID=A0R7B5_MYCS2 Length = 310 Score = 132 bits (333), Expect = 2e-29, Method: Composition-based stats. Identities = 46/271 (16%), Positives = 91/271 (33%), Gaps = 18/271 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L + +E S T+AA+R++V SA+S S+AKL L + +S T Sbjct: 1 MELRQLEHFVAVAEELSFTRAAQRVHVVQSALSSSVAKLERELGVELLDRTRQQISLTAA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQT-PRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 ++ + +D + + + + ++ +P Sbjct: 61 GDRFRTYALGVLREARNAVDVVSEFRGELSGTVDFGSLISFGPMDVARALGDFHRAHPHV 120 Query: 127 TIKLRNWDYDS---LDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVW 183 ++LR + L + G +D+ + P ++ +LF + Sbjct: 121 RLRLRLSQSGASAYLSGLIEGSLDLALISVP---------NRFPPQLEMRLLFEEPMVFV 171 Query: 184 LRKDHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLP-EFEQS 241 R DHP + +LD + E D+ + G + +P F Sbjct: 172 CRPDHPVARRRRVSLDVLGTEDLVGFPPEFGLRRLTDDAFRAAGVQARTQYEVPAGFAAV 231 Query: 242 LFMAAQPDNLLLATAPRY-CQYYNQLHQLPL 271 + A + L A P + L + L Sbjct: 232 ADLVA--NGLGTALMPASEARRLGNLTAVTL 260 >UniRef50_B7J6H8 Transcriptional regulator, LysR family n=3 Tax=Acidithiobacillus RepID=B7J6H8_ACIF2 Length = 316 Score = 132 bits (333), Expect = 2e-29, Method: Composition-based stats. Identities = 44/300 (14%), Positives = 93/300 (31%), Gaps = 21/300 (7%) Query: 5 ITTLDLNLLLCL---QLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLG 61 + L + L +++E SV +AA+++++T SA+ + + L +F P G Sbjct: 10 LEGLSMKHLRLFNYIDTIVREGSVRRAAEKLHITASALDRRVQDLEEELGTGIFERHPRG 69 Query: 62 LSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGL-KFELAAESPLMMIMLNALSKQIY 120 + + + + L + LA L + + Sbjct: 70 MRLSAAGEVFLGYIRRHLSDMQRLRSEIDSLNGLRRGHVALAVSPALAADFIPRIINTFR 129 Query: 121 QRYPQATIKL-RNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 ++YP + + D++ A+ E D+ L+ Sbjct: 130 EQYPGVSFSVTVAKHSDAIRALLAFEADLVVIVAPPRHPDVIDLAIS----------EQP 179 Query: 180 PCVWLRKDHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEF 238 + + HP T L ++YP + + L++VL E IA + Sbjct: 180 LVAAMDRAHPLASQGTLRLSDCIQYPLVLPAPGLTSREMLESVLHGRRSETHIAAESNSY 239 Query: 239 EQSLFMAAQPDNLLLATAP-----RYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLL 293 E + N+ + R + + P+P +Q K + + Sbjct: 240 EVMRGLLYGTQNIGFVISTGIPKNRINENIVYRPISAVDIRPVPLVCAQLKNRGISVSAA 299 >UniRef50_D1BNW2 Transcriptional regulator, LysR family n=4 Tax=Veillonellaceae RepID=D1BNW2_VEIPT Length = 307 Score = 132 bits (332), Expect = 2e-29, Method: Composition-based stats. Identities = 40/256 (15%), Positives = 87/256 (33%), Gaps = 15/256 (5%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +D + L + ++S +KAA+ ++++ SA+S+++ L LF+ + + T Sbjct: 1 MDFHHLKYFVEVADQKSFSKAARNLHISQSAISRTIKALEDELGVVLFMRNAKSVELTDG 60 Query: 68 MVSMEQNLAEWMQMSNLL-LDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + M L D + + + L + + YPQ Sbjct: 61 GTIFLTHAKRVVFMFEHLKTDFENEFRLEQGSIRIGIPPITDAPIFAQLLGEFKKVYPQI 120 Query: 127 TIKLRNWDYDSLD-AITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 ++L ++ ++ G +DIG + + P + L SD V + Sbjct: 121 ELELYEQGSKKVEISVQEGLIDIGIICTKPN----------PKEFESFYLTSDPLSVIIP 170 Query: 186 KDHPALHQ-TWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 K P + L+ + + + + + G + I + + L Sbjct: 171 KSSPLAKEKEIRLEMLADESFVLHKDDFNLHDEIIKACKHTGFQPHIVFETSQRDLMLQT 230 Query: 245 AAQPDNLLLATAPRYC 260 NL +A P Sbjct: 231 V--SANLAIALLPSRL 244 >UniRef50_A3QI10 Transcriptional regulator, LysR family n=2 Tax=Shewanella RepID=A3QI10_SHELP Length = 320 Score = 132 bits (332), Expect = 2e-29, Method: Composition-based stats. Identities = 49/321 (15%), Positives = 111/321 (34%), Gaps = 23/321 (7%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 +I LD + L+ + + + + A + ++ S+VS+ L LR F D LF+ G Sbjct: 1 MNIDKLDYHSLIIFESISRHLNAGLVANELGMSISSVSRHLGILRDIFKDVLFIRRAQGF 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTP--RGLKFELAAESPLMMIMLNALSKQIY 120 + + + + + + ++ H P F++ A + ++ + + I Sbjct: 61 VLSDKAIQLLPYIKQLLHDYQVIKHNHIHFNPLTARGHFKIYAYNEFTYVINKVIHQYIL 120 Query: 121 QRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 + P T ++R D AI GE+D P ++ Sbjct: 121 PQAPNLTFEVRTLSSDCSRAIEHGEIDFAVVYERFKDHKIICEMFSP---------TEEL 171 Query: 181 CVWLRKDHPALHQTWNLDTFLRYP-HISICWEQSDTWALDNVLQELGRERTIAMSLPEFE 239 + ++ H + L +Y + L+ + + G+ + + Sbjct: 172 FLIAKEGHAVFEDEFTLANLCQYDYFALDNYNDLPMPLLEQLGKTEGKAVNVLGATDNIA 231 Query: 240 QS-LFMAAQPDNLLLATAPRYCQY--YNQLHQLPLVALPLPFDESQQKKLEVPF----TL 292 + D ++ + Y+ + + LP E K++ V L Sbjct: 232 ALSRHIL---DGRAISMSCNVFTREFYSLIKGIRTATLPSALTERLLKQITVGRTVGNYL 288 Query: 293 LWHKRNSHNPKIVWLRETIKN 313 ++ + N +P WL++ + N Sbjct: 289 IYSEINQ-SPTHHWLKQQLFN 308 >UniRef50_C4V352 LysR family transcriptional regulator n=2 Tax=Selenomonas RepID=C4V352_9FIRM Length = 314 Score = 132 bits (332), Expect = 2e-29, Method: Composition-based stats. Identities = 40/256 (15%), Positives = 97/256 (37%), Gaps = 9/256 (3%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L + + +++ S TKAA+ ++ TPS ++ +A+L PLF S + T Sbjct: 1 MELKIFTTFKTIVRTGSFTKAARLLSYTPSTITFHIAQLEKLTGVPLFEKSGRRMILTKA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQAT 127 + + E + + + + A L+ L L ++++ P+ Sbjct: 61 GEELIPYVDEVLAAVKKVKSFQYGIATYQGTLTVGAPESLLCFRLPPLLQRLHAHAPRVD 120 Query: 128 IKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRK 186 ++LR+ D + A++ G++D+G + L + ++ V Sbjct: 121 LRLRSLTSRDVVAALSEGQIDVGLAYTIQERDKESLAFWMFEENPVH-FYTSVDVAVWCP 179 Query: 187 DHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAA 246 + + P +++ + +D+ L++ T + L + + + Sbjct: 180 N--FREREM---EINEMPLVTMPYPGEIRQMVDDYLRKQAISFTNMIELRSTQTIINLVE 234 Query: 247 QPDNLLLATAPRYCQY 262 +N+ +A P Y Sbjct: 235 --NNMGVAPLPDYAVR 248 >UniRef50_B1K332 Transcriptional regulator, LysR family n=6 Tax=Burkholderia RepID=B1K332_BURCC Length = 302 Score = 132 bits (332), Expect = 2e-29, Method: Composition-based stats. Identities = 39/264 (14%), Positives = 80/264 (30%), Gaps = 17/264 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L + E T+AA R+++ +S+ + +L LFV P G T Sbjct: 1 MELRQLRYFLAVADEGQFTRAAARLHIQQPPLSQQIQELEHELGFALFVRQPRGAVLTAP 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMI-MLNALSKQIYQRYPQ 125 + N + +A S + + YP Sbjct: 61 GEIFAARARTVLLELNNAVVHARRVAQGRIGTVRVALTSSAAFHPLTPTAIRNFRDMYPG 120 Query: 126 ATIKLRNWD-YDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 +I++ + + ++ + G D + + +E+L + + L Sbjct: 121 ISIEMSEVNAAEIIEMMLNGRADAAILRKPV---------ETSADLRFELLAEERMLLVL 171 Query: 185 RKDHPALHQT-WNLDTFLRYPHISICWEQSDTWALD--NVLQELGRERTIAMSLPEFEQS 241 H + +L I + + D Q G E + +P + Sbjct: 172 PVGHRLIGGRSVSLKQLANESFIFVRRPGAPGMYADFIRACQAKGFEPHVVEEVPRMVTA 231 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQ 265 + + A ++ P Q Y Q Sbjct: 232 INLVAA--GGGVSLVPASMQRYRQ 253 >UniRef50_Q67TA2 LysR family transcriptional regulator n=1 Tax=Symbiobacterium thermophilum RepID=Q67TA2_SYMTH Length = 303 Score = 132 bits (332), Expect = 2e-29, Method: Composition-based stats. Identities = 49/270 (18%), Positives = 96/270 (35%), Gaps = 14/270 (5%) Query: 11 NLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVS 70 N L + + S+++AA ++++ AVS+ L L + LF + G+ TP + Sbjct: 3 NELDIFCAVAKHGSMSRAAAELHLSQPAVSQRLRALEEQYGLQLFRRTNRGVELTPAGET 62 Query: 71 MEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNALSKQIYQRYPQATIK 129 + + +Q+ L + + + A S + L Q+YP A I+ Sbjct: 63 LVRYAQRILQLERSLQAEMASLRAAEPKQVVIGATSAIGGYALPCTVYLFQQKYPDARIQ 122 Query: 130 LRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDH 188 L+ D + + G VD+ L+++LP V+ + + Sbjct: 123 LQIGKRCDVIQRLEDGLVDLALVEGP-------LVTALPDDWQVSVISEEELVLITPPTG 175 Query: 189 PALHQTW-NLDTFLRYPHISICWEQSDTWALDNVLQELGRERT---IAMSLPEFEQSLFM 244 P + D R P I A++ Q GR+ IA+ L + Sbjct: 176 PLAGKEAYTADDLTRLPLIIREPGSGTRMAVEEGWQAAGRDLRDLNIALELTGVDAIKTS 235 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVAL 274 A + + + + ++ L + L Sbjct: 236 VA-SGHGVALVSRWCVRAEARMGHLRIAPL 264 >UniRef50_Q0K1W4 Transcriptional regulator (Transcriptional regulator, lysr-family) n=3 Tax=Burkholderiaceae RepID=Q0K1W4_RALEH Length = 329 Score = 132 bits (332), Expect = 2e-29, Method: Composition-based stats. Identities = 53/313 (16%), Positives = 116/313 (37%), Gaps = 20/313 (6%) Query: 6 TTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPT 65 L + L L + RS+ +AA ++ ++ AV+K+L +L + LF G+ PT Sbjct: 16 KRLHMRHLRLALALAEHRSLRRAAAQMALSQPAVTKALHELESVVGTLLFTRHARGIEPT 75 Query: 66 PLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNALSKQIYQRYP 124 ++ + + + L D+ K L + + +L+ + + RYP Sbjct: 76 VFGEALIRYARVVLADLDALHDEFAAIAAGEVGKVRLGSILAPVPSVLSGVINALKARYP 135 Query: 125 QATIKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVW 183 + I ++ D L A+ + +D+ ++ +D+E LF + + Sbjct: 136 RLHIVMQVDTSDVLVQALRQDALDVVIGRIPEG--------TVADDLDFEPLFEESLAIV 187 Query: 184 LRKDHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRE-RTIAMSLPEFEQS 241 R HP + L + YP I +D ++ + + Sbjct: 188 ARAGHPQAGKRGVKLASLAGYPWIIPPAAVPMWQIIDQTFRDNRVPLPEDIIETSSIMGT 247 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 L + A D + + +Y+ L L ++ + + VP+ ++ +R + Sbjct: 248 LPLLADSDRIAVVPG-AIAEYFVALGALAVLPV-------AMRGRLVPYGIVLRRRRAAT 299 Query: 302 PKIVWLRETIKNL 314 P + L + ++ Sbjct: 300 PAMRLLIDAVRAA 312 >UniRef50_C1M4D9 Putative uncharacterized protein n=2 Tax=Citrobacter RepID=C1M4D9_9ENTR Length = 302 Score = 132 bits (332), Expect = 2e-29, Method: Composition-based stats. Identities = 45/319 (14%), Positives = 110/319 (34%), Gaps = 28/319 (8%) Query: 7 TLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTP 66 ++L L + +E +AA R+N++ +S+ + L L + ++ T Sbjct: 2 NIELRHLRYFVAVAEELHFGRAAARLNISQPPLSQQIQILEQQVGARLLARTNRSVALTS 61 Query: 67 LMVSMEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMI-MLNALSKQIYQRYP 124 + + + + N + + + S I ++ Q YP Sbjct: 62 AGKQFLADSRQILGLVNEAAARAERLHLGEAGELRIGFTSSAPFIKAVSDTLSLFRQSYP 121 Query: 125 QATIKLRNWD-YDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVW 183 ++ R + + + + G +D+G + LP ++ E++ + Sbjct: 122 AVHMQTREMNTREQIAPLNEGTLDLGL----------LRNTQLPETLEREIILHEPLMAM 171 Query: 184 LRKDHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVL---QELGRERTIAMSLPEFE 239 + + HP + L P + T D++L + G + TIA + E Sbjct: 172 IPRAHPLAQKPVVTLAELANEPFVFFDPH-VGTGLYDDILGLMRRYGLKPTIAQEVGEAM 230 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 + + A L ++ P + ++ + +P+ +++ L+W K + Sbjct: 231 TIIGLVAA--GLGVSILP---ASFKRVQLYEMCWIPIAEEDAVS-----EMWLVWPKHHE 280 Query: 300 HNPKIVWLRETIKNLYASM 318 + RE + ++ Sbjct: 281 QSHAAQRFREQLLAAVQAI 299 >UniRef50_C5AK02 Transcriptional regulator, LysR family protein n=26 Tax=Burkholderia RepID=C5AK02_BURGB Length = 338 Score = 132 bits (332), Expect = 2e-29, Method: Composition-based stats. Identities = 45/292 (15%), Positives = 92/292 (31%), Gaps = 22/292 (7%) Query: 13 LLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSME 72 L + SVT AA+R+ + A+S+++ + LF + G + T ++ Sbjct: 7 LKYFLAVADAGSVTGAAERLGLAQPALSQAITRFERELGVRLFSRTRRGAALTAAGEAIV 66 Query: 73 QNLAEWMQMSNLLLDKPHHQ-TPRGLKFELAAESPLMMIMLNALSKQIYQRYPQATIKLR 131 +L M + RG + + S + ++ + P + LR Sbjct: 67 DDLRLSMARIEAAERRARDIGAQRGGRLTIGFASAALFELMPRAIAALRDEVPNVELTLR 126 Query: 132 NWD-YDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPA 190 + A+ GE+DIG R R + +++ + + + HP Sbjct: 127 EMSNAEQAGALESGEIDIGLLHTPVAVRGR---------MHEKLIARERLQAVVHESHPL 177 Query: 191 -LHQTWNLDTFLRYPHISICWE--QSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQ 247 L R + E + + + ++ G E ++ L A Sbjct: 178 GADGRLALADLARLGLVWFPQEQLPAIRAGILSAFRKAGCETSVVQDANRSLTVLACVAA 237 Query: 248 PDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 + PR Q + + + L + +W KR+ Sbjct: 238 --GCGASLLPRSVQAL-RFSGVRVCEL-----RDGAALPFFELSAVWPKRSR 281 >UniRef50_C9ABQ3 Transcriptional regulator n=1 Tax=Enterococcus casseliflavus EC20 RepID=C9ABQ3_ENTCA Length = 299 Score = 132 bits (332), Expect = 2e-29, Method: Composition-based stats. Identities = 39/255 (15%), Positives = 94/255 (36%), Gaps = 17/255 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L +L +E T+++K +N+T ++S +++ L LF + ++ T Sbjct: 1 MNLQHLKYFDVLAREEHYTRSSKLLNITQPSLSNAISLLEDELGVQLFEKNGRNVALTKP 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQAT 127 +++ ++ + +D + A L + ++KQ + P Sbjct: 61 GKIFHEHVIRTLENLDSGIDTVTKISKGFGHISFAFLQVLGTSYVPKVTKQFLEANPGKK 120 Query: 128 IKLR----NWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVW 183 I+ + +++ + D+G ++ I++ + S V Sbjct: 121 IQFEFHSDSVSTETVQGLKTLRYDLGICSYITNE----------PTIEFVPIASQELVVI 170 Query: 184 LRKDHPALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 +HP +L+ YP I + + +D++ Q +A + + Sbjct: 171 TALNHPLAQFDEVSLEDLAEYPQIIFSKKSALREIIDDLYQRNNVSYQVAYEVKIDQVIA 230 Query: 243 FMAAQPDNLLLATAP 257 + +Q NL +A P Sbjct: 231 GLVSQ--NLGIAIIP 243 >UniRef50_Q3AG49 Transcriptional regulator, LysR family n=1 Tax=Carboxydothermus hydrogenoformans Z-2901 RepID=Q3AG49_CARHZ Length = 297 Score = 132 bits (332), Expect = 2e-29, Method: Composition-based stats. Identities = 40/242 (16%), Positives = 85/242 (35%), Gaps = 16/242 (6%) Query: 11 NLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVS 70 N L +++ +++S ++AA+ ++++ A+S + L ++ L + ++ TP Sbjct: 4 NQLEIFRVVAEKKSFSEAARLLHISQPAISMHIQALEEYYGTKLLDRTTKRVTLTPAGEI 63 Query: 71 MEQNLAEWMQMSNLLLDKPHHQTP-RGLKFELAAESPLMMIMLNALSKQIYQRYPQATIK 129 + + + + + K L A + +L L Y++YP I Sbjct: 64 LYKYTLHLLSLMDKAQRDISQAAGIIKGKLILGASLTIGGHVLPPLLSSFYRKYPDVNIT 123 Query: 130 LRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDH 188 + + + L+ ++ +D+GF E + E L D V + +H Sbjct: 124 MEIMNTEKVLERVSDLTLDLGFVEGEVTTG----------ELHVEALARDELVVVVAANH 173 Query: 189 PALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELG---RERTIAMSLPEFEQSLFM 244 P + + P + ++ LQ G E I M L E Sbjct: 174 PLAGRGRISWEELATLPLVMREPGSGTRKVIEERLQAAGFKLPELKIVMELGSTEAIKGA 233 Query: 245 AA 246 Sbjct: 234 VE 235 >UniRef50_A9ANZ9 LysR family transcriptional regulator n=21 Tax=cellular organisms RepID=A9ANZ9_BURM1 Length = 315 Score = 132 bits (332), Expect = 2e-29, Method: Composition-based stats. Identities = 40/288 (13%), Positives = 88/288 (30%), Gaps = 17/288 (5%) Query: 11 NLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVS 70 + + LM S T+AA+ + + +S+ LA++ LF + L PT ++ Sbjct: 7 RHIEVFRALMLSGSTTRAAEMLYTSQPTISRELARMEQIVGFALFERAHGRLRPTMAALT 66 Query: 71 MEQNLAEW---MQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQAT 127 + ++ ++ + R + + A +L ++ + + Sbjct: 67 LFDDVRLAYVGLERVAATAARLREF--RDGQLSVIALPAFAHAILPGACRRFRDAHAGVS 124 Query: 128 IKLRNWDYDSLDA-ITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRK 186 + + + L+ +T DIG + + P L L Sbjct: 125 VSVATQESPVLEEWLTAQRYDIGLTEHDVA----------PPGTLLTPLLEVDEVCVLPD 174 Query: 187 DHP-ALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMA 245 HP + +L P +S+ +D+ +LG + P Sbjct: 175 GHPLLAREAIDLADLADRPFVSLSLNDPYRVMIDDAFAQLGVAPRSVVETPSAVSVCAFV 234 Query: 246 AQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLL 293 Q + + + + + P+ S P +LL Sbjct: 235 RQGLGAAIVNPLTALDFVGRDLHVRPLTRSFPYRVSVIVPEHRPKSLL 282 >UniRef50_Q481E9 Transcriptional regulator, LysR family n=1 Tax=Colwellia psychrerythraea 34H RepID=Q481E9_COLP3 Length = 264 Score = 132 bits (332), Expect = 2e-29, Method: Composition-based stats. Identities = 47/156 (30%), Positives = 71/156 (45%), Gaps = 1/156 (0%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 + LDLN L L S KAA ++N + S VSK L+KLR DPLFV + GL P Sbjct: 1 MKQLDLNSLSVFITLYHAGSTQKAALKLNRSQSYVSKVLSKLREDIGDPLFVRTATGLEP 60 Query: 65 TPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYP 124 T + + E + + L+ K + +P ++ + L +I Q+ P Sbjct: 61 TSYANIIAPKVKEALAQMHSALEPESFNPLALDKVTIHLAAPFIIPIGKILINKIRQKTP 120 Query: 125 QATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSR 160 I+LR W+ S + +VDI F + P+S Sbjct: 121 AV-IELREWNLHSEVLLLEEQVDIAFHALKDRPQSL 155 >UniRef50_O32255 Uncharacterized HTH-type transcriptional regulator yvbU n=78 Tax=Bacillus RepID=YVBU_BACSU Length = 292 Score = 132 bits (332), Expect = 2e-29, Method: Composition-based stats. Identities = 43/246 (17%), Positives = 85/246 (34%), Gaps = 18/246 (7%) Query: 12 LLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPL-GLSPTPLMVS 70 L + + S TKA + +N+T AVS +++ + A D L + GL T Sbjct: 5 QLKVFVKIAETGSFTKAGQALNMTQPAVSHAISAIEAELDVKLIIRDRRNGLMLTDTGKQ 64 Query: 71 MEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNALSKQIYQRYPQATIK 129 + ++ E ++ + + + S + L + Q+YP+ + Sbjct: 65 ILVHIREVLKGIEKVEQVAAAEKGLELGTIHIGTFSTASAYFMPKLISEFKQKYPKLELV 124 Query: 130 LRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDH 188 L + + + + +D+G + ++Y L D V LR DH Sbjct: 125 LHEGTVNEVKEWLHTRMIDVGILLYPT------------EEMEYIHLKKDKMAVVLRDDH 172 Query: 189 PAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQ 247 P H L P I + ++ ++ G A ++ S+ M + Sbjct: 173 PLASHSAITLKDLDHEPMIVC--DGGYESPFIDMFRQAGATLHPAFTVYNINTSISMIRE 230 Query: 248 PDNLLL 253 L + Sbjct: 231 GLGLAI 236 >UniRef50_UPI0001B4610F LysR family transcriptional regulator n=1 Tax=Mycobacterium intracellulare ATCC 13950 RepID=UPI0001B4610F Length = 320 Score = 131 bits (331), Expect = 3e-29, Method: Composition-based stats. Identities = 46/274 (16%), Positives = 96/274 (35%), Gaps = 16/274 (5%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L + L + S TKAA+ + V PSA+S+ + + + LF + +S TP Sbjct: 1 MNLQQLRYVVALAEANSFTKAAEAMFVVPSALSQQVGRFESEIGLRLFERTTRSVSLTPA 60 Query: 68 MVSMEQNLAEWMQMSNL-LLDKPHHQTPRGLKFELAAESPLMMIM-LNALSKQIYQRYPQ 125 ++ + + + + +D + + + + L + YP Sbjct: 61 GEALMPLVRQVVAGIDQIAVDAQALGGTVVGRLTVGMMEIPSESLDVATLMATFHSHYPD 120 Query: 126 ATIKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 ++ LR+ D L +A+ ++D+ G +S A+ + LFS+ + Sbjct: 121 VSVTLRSGGSDVLIEAVRDRKLDVAIVGSN--------VSRTGGALTFTHLFSEPLIAVM 172 Query: 185 RKDHPALHQ-TWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 HP + + ++ P I D R +A + ++ Sbjct: 173 PAHHPLTKKSSVSIIALAALPFIDFPPGYGLRHETDRGFA--NVTRRVAFEVTRVDEVTH 230 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLP 277 + +L +A P L P+ Sbjct: 231 FVRK--DLGVALLPESVARTRANADPRLALRPVA 262 >UniRef50_A0QTM3 HTH-type transcriptional regulator AlsR n=7 Tax=Actinomycetales RepID=A0QTM3_MYCS2 Length = 304 Score = 131 bits (331), Expect = 3e-29, Method: Composition-based stats. Identities = 35/289 (12%), Positives = 84/289 (29%), Gaps = 16/289 (5%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L + + +E +AA+R+++ +S+ + +L L + + TP Sbjct: 1 MELRHLRYFRAVGEELHFGRAAERLHMAQPPLSQQIRQLERELGCTLLTRTTRSVELTPA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + E + + + + + +L L + + + P Sbjct: 61 GHTYLRRAVEILDAVDAANTEAQRIASGIQGRIAIGCVGSATYSLLPQLVRALGESLPGI 120 Query: 127 TIKLR--NWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 + +R ++A+ G +D+ + + D V L Sbjct: 121 EVTVRGEMLAPAQIEALLSGGIDLALLRPPVRQEAVL----------THTVRRDGLVVAL 170 Query: 185 RKDHPAL-HQTWNLDTFLRYPHISICWEQSD--TWALDNVLQELGRERTIAMSLPEFEQS 241 DH + + + + V + G I + E Sbjct: 171 PADHALAIRDAVTVADLRDEDFVVHTGHGRSVMSNLVATVCADAGFLPRIRQEVSETSTL 230 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPF 290 + + A + + P + +PL L D + P Sbjct: 231 VTLVAAGLGVAIVPDPTTALDIAGVRYVPLRPTDLGVDLVAAHTGDSPL 279 >UniRef50_B0KIN0 Transcriptional regulator, LysR family n=20 Tax=Proteobacteria RepID=B0KIN0_PSEPG Length = 313 Score = 131 bits (331), Expect = 3e-29, Method: Composition-based stats. Identities = 50/242 (20%), Positives = 88/242 (36%), Gaps = 14/242 (5%) Query: 10 LNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSP-LGLSPTPLM 68 L L ++ SV +A++++ + ++S ++ L F LF+ G+S TP Sbjct: 18 LRQLKYFVTTVEAGSVAEASRQLYIAQPSISTAIKSLEESFGVQLFIRHHAQGVSLTPSG 77 Query: 69 VSMEQNLAEWMQMSNLLLDKP-HHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQAT 127 +QM++ + ++ + + L L QRYP Sbjct: 78 KRFYAKTRALLQMAHEFEQNALADNDTVAGQIDIGCFETVAPLYLPRLIAGFRQRYPGVD 137 Query: 128 IKLRN-WDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRK 186 I+LR+ D + +T G D+ F + E +P P V L + Sbjct: 138 IRLRDGEQQDLIQGLTAGTFDLAFLYDHDLDGTIEAEPLMPPQ---------KPYVLLPE 188 Query: 187 DHPALHQ-TWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMA 245 +H Q +L P I + S T+ + ++ E+G I S P E M Sbjct: 189 NHRFAGQAQVSLRDLCPEPMILLDVAPSRTYFV-SLFNEMGLTPNIVFSSPSIEMVRGMV 247 Query: 246 AQ 247 Q Sbjct: 248 GQ 249 >UniRef50_A7JZ93 Transcriptional regulator, LysR family protein n=14 Tax=Vibrionales RepID=A7JZ93_VIBSE Length = 291 Score = 131 bits (331), Expect = 3e-29, Method: Composition-based stats. Identities = 57/313 (18%), Positives = 108/313 (34%), Gaps = 33/313 (10%) Query: 7 TLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTP 66 LD+ +L L+ + + SV A + T ++SK+L K++A DDPLF+ + G PT Sbjct: 4 NLDIQNILVLKRMYELHSVRLVADSLGKTSGSISKNLTKMKAQLDDPLFIQTKNGFEPTA 63 Query: 67 LMVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + + + + + + + + A + + ++ + P+A Sbjct: 64 FVEANMPHFEQILTSIDSIKPQSFSPANFDGSITIYANTLFWDYFGDKFYLELLKHAPKA 123 Query: 127 TIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRK 186 W D+ +T GE I + LP +I L ++R Sbjct: 124 KFACLRWGSDAKKRLTEGENAIAIHYFDED---------LPQSIIQNELGRGKAVFFVRD 174 Query: 187 DHPALHQTWNLDTFLRYPHISICW--EQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 +HPA H YP + + L L +G T + + + Sbjct: 175 EHPAQH----FQELENYPFLLFKTPGWNDYRYPLLERLNHMGFRTTPKVEIEHPAMIQKV 230 Query: 245 AAQPDNLLLAT---APRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 Q D+ + P+ C+ L L +V + + + Sbjct: 231 LLQTDHFGITMSGHVPKGCRSIALPGGLEL---------------DVRYVMSCRRSQQQA 275 Query: 302 PKIVWLRETIKNL 314 P WL IK++ Sbjct: 276 PINQWLFNVIKDI 288 >UniRef50_C0ZI27 Transcriptional regulator n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZI27_BREBN Length = 307 Score = 131 bits (331), Expect = 3e-29, Method: Composition-based stats. Identities = 30/277 (10%), Positives = 87/277 (31%), Gaps = 15/277 (5%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L + +E ++A++++ + S +S+ + L PLF ++ T Sbjct: 1 MELRQLEYFMAICEEMHFSRASEKLCTSQSNLSQQIKFLENELGVPLFDRLGKRITLTEA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + + + + ++ +AL + ++ YP+ Sbjct: 61 GKVLLEQSRHVFSHIDYAREAIAAMKNNEGGTLTIGVLPGDADLLFDALLVEFHRLYPKT 120 Query: 127 TIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRK 186 ++ + ++ IT GE+D+G + ++ LF + + + + Sbjct: 121 SLSVIE-STRIVEQITSGEIDLGVTVLPEPDERITVIP----------LFHEEFALAVHR 169 Query: 187 DHPALHQ-TWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMA 245 HP + + + ++ + G + + L + Sbjct: 170 AHPLAKEKAIKFGQLQEVKMVMFPPDHQARQLINRYCIQEGFRLQPHIETTTLQSQLSLV 229 Query: 246 AQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQ 282 + + P ++ ++ L P Sbjct: 230 KK--GIGGCILPSLLLQNVNDDEIAIINLLHPTPSQD 264 >UniRef50_Q0RY04 Transcriptional regulator, LysR family protein n=5 Tax=Rhodococcus RepID=Q0RY04_RHOSR Length = 305 Score = 131 bits (331), Expect = 3e-29, Method: Composition-based stats. Identities = 60/311 (19%), Positives = 110/311 (35%), Gaps = 22/311 (7%) Query: 13 LLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSME 72 + L + ++ SV AA+ + VTPS VS+ LAKL L V G+ T + Sbjct: 7 IRALCAVAEQGSVAAAARSLYVTPSGVSQQLAKLEKEVGVALLVQVGRGVQLTQAGRLLA 66 Query: 73 QNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQIYQRYPQATIKLR 131 Q + + + + + + + S +++ ++ Q +P + Sbjct: 67 QRGQDIISLLAQAESEVASLDSDVAGELRIGSFSSASRVVVPRAIARMRQLHPGLEVSFV 126 Query: 132 NWD-YDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPA 190 D D L A+ E+D+ + LP + + DV V L DH Sbjct: 127 AGDTDDLLPAVVGRELDLAV-----VDSWVTMPLHLPEDVICTPIHQDVADVALPADHRL 181 Query: 191 -LHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQPD 249 + LD P + +S L L+ G E I +PEF L A Sbjct: 182 AAAEQIELDEVADMPWTTWRKGESFHTWLVQTLRMRGVEPEIRYEVPEFAAQLEFVAH-- 239 Query: 250 NLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN-PKIVWLR 308 L A PR + + + P+ L + +R ++ P + Sbjct: 240 GLAAALIPRLARIWVPDDVAIVAVHPV---------LRREIFAV--RRKDNDRPTVRAGI 288 Query: 309 ETIKNLYASMA 319 + + ++A+++ Sbjct: 289 DALSEVFAAIS 299 >UniRef50_Q13GE5 Transcriptional regulator, LysR family n=1 Tax=Burkholderia xenovorans LB400 RepID=Q13GE5_BURXL Length = 303 Score = 131 bits (331), Expect = 3e-29, Method: Composition-based stats. Identities = 36/252 (14%), Positives = 88/252 (34%), Gaps = 15/252 (5%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +LN ++ + + S +AA+ + + SAVS +++L LF + ++ T Sbjct: 5 FNLNNVITFLAVAETLSFRRAAEHTHTSQSAVSARVSQLEDRLGVRLFHRTTRQVTLTAE 64 Query: 68 MVSMEQNLAEWMQMSNLLLDK-PHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + ++ + + + + +AA + +L + + ++RYP Sbjct: 65 GLQLFVVARTAVEDMERVAESLRKKAALQSGELTIAAVPSIGQTVLPTIMGEFHRRYPGV 124 Query: 127 TIKLRNWDYDS-LDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 T+KL + D ++ + G VD+ I +E LF D + + Sbjct: 125 TLKLLDVDSQRCIEMMEAGSVDLAIVSDLEDRH----------DIVFEPLFRDECFLVVP 174 Query: 186 KDHPALHQT-WNLDTFLRYPHISICWEQSDTW-ALDNVLQELGRERTIAMSLPEFEQSLF 243 + H + +L +P + + W ++ G + Sbjct: 175 RTHALGERRSISLREAASFP-LMASPRGTTLWQIIERAFAACGATPVAHQETWNMSTLVR 233 Query: 244 MAAQPDNLLLAT 255 + + + + Sbjct: 234 LVEEGFGMGIVP 245 >UniRef50_C4ZIH4 Transcriptional regulator, LysR family n=1 Tax=Thauera sp. MZ1T RepID=C4ZIH4_THASP Length = 318 Score = 131 bits (331), Expect = 3e-29, Method: Composition-based stats. Identities = 39/285 (13%), Positives = 81/285 (28%), Gaps = 17/285 (5%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 + +N L + + SV AA + V+ +AVS++L +L PLF G + Sbjct: 1 MKINQLRYFLAVADKGSVRAAATALGVSAAAVSQALRELETAMGTPLFTRESHGAVLSYA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + + + + + +L + + P Sbjct: 61 GRQFLIHARLILGQVSRAEAEIAQIRGATGGSLTIGVTPWVAQSILPHALARFHALRPDV 120 Query: 127 TIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRK 186 + + + G +D+ + + LF V R Sbjct: 121 HLDVTEAVGTVHPLLRDGTLDLVIAIPPPRQEASI--------FYTRELFRCDLAVVGRL 172 Query: 187 DHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRER---TIAMSLPEFEQSLF 243 HP T +L+ + + L N+L G + ++ Sbjct: 173 GHPFASAT-SLEELVDQDWVLTMLGAGQDEPLVNLLAPHGIAPPPHRVHY-ARSALVAIS 230 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEV 288 M + L + P L + + ALP+ + + Sbjct: 231 MLEVGNMLTICPWPLL---ETPLLRGRVQALPIRNPLPEMHTAII 272 >UniRef50_C6CM82 Transcriptional regulator, LysR family n=6 Tax=Enterobacteriaceae RepID=C6CM82_DICZE Length = 315 Score = 131 bits (331), Expect = 3e-29, Method: Composition-based stats. Identities = 43/312 (13%), Positives = 103/312 (33%), Gaps = 21/312 (6%) Query: 7 TLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTP 66 +DL L L++ R+ T AA+ +N++ SA S+S+ L L L PT Sbjct: 2 NIDLRQLRHFIALIEHRNFTSAAQAMNISQSAFSRSIQSLEQSVGARLIDRHHN-LEPTK 60 Query: 67 LMVSMEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNALSKQIYQRYPQ 125 + + ++ + + LL+ + + + ++ + + ++YP+ Sbjct: 61 KGLLVLEHARRLTRHAQDLLNDIEQFSEKESGEVHFGCGPAPAAWLMPQVIGEFSRQYPR 120 Query: 126 ATIKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 + R ++ +L + E + L + + L Sbjct: 121 VRLMFRVDNWQALGQRLMAEEFAFIVADTRHF--------ELDARYNVQPLSRHRWGFCC 172 Query: 185 RKDHPALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 R+ HP +++ YP + + AL + + ++ L Sbjct: 173 RQGHPLAAFDEISVEQLFSYPLAATVRPPNLRQALVRLSGQQDI--RTSIECENGYSLLD 230 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 + Q D + T R+ H + + + F + + + + Sbjct: 231 VIRQSDAIG-TTNHRHGPLQQPPHGIHM------LKITGLDDDTDEFYTHYGIVSRADSR 283 Query: 304 IVWLRETIKNLY 315 + WL + + ++ Sbjct: 284 LSWLSQRLIAMF 295 >UniRef50_A1SY80 Transcriptional regulator, LysR family n=1 Tax=Psychromonas ingrahamii 37 RepID=A1SY80_PSYIN Length = 294 Score = 131 bits (331), Expect = 3e-29, Method: Composition-based stats. Identities = 44/288 (15%), Positives = 84/288 (29%), Gaps = 17/288 (5%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +D L +L Q + TKAA+ + + SA+S S+ KL L + +S T Sbjct: 1 MDFKRLYYFTVLAQTGNFTKAAEELGIAQSALSMSIQKLEKQLALKLINRAERKMSITSD 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + ++ + + + L + + L QRYP Sbjct: 61 GQVLLKHAQKILDNVKQAKIQLQELKGLESGTINLGTPAMIGSYYLPDTLALFKQRYPGI 120 Query: 127 TIKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 I + +L + + GE+D+ + H I L + + Sbjct: 121 QINIHEAGTATLANMLLDGELDLAMIRADRH----------HDNIRCITLAKEQIVACVP 170 Query: 186 KDHPALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 ++H L+ F P + A+ + Q+ G I E + Sbjct: 171 REHEFAKCYNITLEQFCNQPLVLFREGYFLREAVSSYCQQHGINPDIRFETNLIELLKSL 230 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTL 292 + + + +L V P + L Sbjct: 231 IRKKIGISTCLP----IILTEDSELVTVPFNPPIPIHLGIGWKASHYL 274 >UniRef50_A0AYH9 Transcriptional regulator, LysR family n=148 Tax=Proteobacteria RepID=A0AYH9_BURCH Length = 326 Score = 131 bits (331), Expect = 3e-29, Method: Composition-based stats. Identities = 40/256 (15%), Positives = 84/256 (32%), Gaps = 17/256 (6%) Query: 6 TTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPT 65 + ++L L + +ER+ T+AA+R+++ +S+ + +L PLF + L T Sbjct: 20 SNMELRHLRYFVAVAEERNFTRAAERLHIAQPPLSRQIQQLEEALGVPLFERTARPLKLT 79 Query: 66 PLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQ 125 + + + + L + + ML + ++ YP Sbjct: 80 DAGRFFYSHAVQLLAQTTELESMTKRVGKIERSMSVGFVGSTLYGMLPKIIRRFRSEYPA 139 Query: 126 ATIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 + L D + A+ G +D+GF + ++ VL + V L Sbjct: 140 VELSLHEMSTMDQIKALKEGRIDVGFGR----------IRHEDPSVRRVVLREERMIVAL 189 Query: 185 RKDHPA--LHQTWNLDTFLRYPHISICWEQSDTWALDNVLQE---LGRERTIAMSLPEFE 239 H +L + I + D VL + E + Sbjct: 190 PVGHVLDSAKPVLSLHDLVNDTLIIF-PKAPRPSYADQVLAAFHDRALQPRRIYETRELQ 248 Query: 240 QSLFMAAQPDNLLLAT 255 +L + A + + + Sbjct: 249 IALGLVAMGEGVSVVP 264 >UniRef50_C8X447 Transcriptional regulator, LysR family n=1 Tax=Desulfohalobium retbaense DSM 5692 RepID=C8X447_DESRD Length = 304 Score = 131 bits (331), Expect = 3e-29, Method: Composition-based stats. Identities = 55/320 (17%), Positives = 107/320 (33%), Gaps = 31/320 (9%) Query: 1 MKKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPL 60 M L + ERS +KAA+ + +T VS +++L + LF P Sbjct: 1 MTMDSRR-----LEVFSFVYSERSFSKAAQALCLTQPTVSAHISELEQYLGTRLFDRLPR 55 Query: 61 GLSPTPLMVSME---QNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSK 117 + PT ++ Q + ++ + + + + L + +L L Sbjct: 56 KIVPTAAARTLYTYTQQIQGLLKEAEASVWALEN--RIVGQLLLGGSTIPAEYLLPDLLG 113 Query: 118 QIYQRYPQATIKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLF 176 + QRYP+ + L+ D ++ +A+ GE++ G G + + Sbjct: 114 RFVQRYPEVRLDLQVGDSRTITEAVRTGELEAGVVGGRYSESELAYSPYIKDEL------ 167 Query: 177 SDVPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERT---IAM 233 + R A ++D R P + AL + L+ G + Sbjct: 168 ---LVLAGRHTDVAKSGPLSMDQLSRLPWVLREPGSGTRRALRHALKRSGLRLEDLSVRA 224 Query: 234 SLPEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLL 293 L L + + + R L + LV +P+P + E F L+ Sbjct: 225 VLGSTGALLRAVRG--GVGVTVSSRLAAA-GMLDRGELVHMPVP-----EFVSERDFELV 276 Query: 294 WHKRNSHNPKIVWLRETIKN 313 H+ S +P + + Sbjct: 277 VHRGRSQSPILQRFIACVAR 296 >UniRef50_B6AZI7 Transcriptional regulator, LysR family n=1 Tax=Rhodobacterales bacterium HTCC2083 RepID=B6AZI7_9RHOB Length = 301 Score = 131 bits (331), Expect = 3e-29, Method: Composition-based stats. Identities = 45/316 (14%), Positives = 104/316 (32%), Gaps = 34/316 (10%) Query: 7 TLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTP 66 +DL C + +E +AAKR+ V A+S+++ + L S + T Sbjct: 2 GIDLRHFRCFVAVAEELHFHRAAKRLGVAQPALSRTIKTMENELGVTLLERSNRRVELTH 61 Query: 67 LMVSMEQNLAEWMQMSNLLLDK-PHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQ 125 + + ++ S +++ Q + M L +L K + P Sbjct: 62 VGEIFLTGCRKCLEHSERIIEDMQRVQQGSIGTLRIGYTENAMNGQLPSLLKAFKGQTPD 121 Query: 126 ATIKL-RNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 ++ L + + + + G +D+GF+ + + S+ + Sbjct: 122 ISLVLTHSVTSEQVSQLEDGSIDLGFATGNLAK----------TGFESIRIQSERFVCVV 171 Query: 185 RKDHPAL-HQTWNLDTFLRYPHI--SICWEQSDTWALDNVLQELGRERTIA---MSLPEF 238 HP + L P + + Q L+ + + G E IA ++ + Sbjct: 172 YDSHPFATRSSICLSELAEEPMVQGARAHWQHYYSRLEPLFRTAGFEPKIAQEGLTTTDI 231 Query: 239 EQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRN 298 + + A + + T + L LP+ + +W + Sbjct: 232 Q---RLVACGIGIAILT-----ETVVDCLPSGLAVLPIE-----DVTDCLDTIAVWPAKQ 278 Query: 299 S---HNPKIVWLRETI 311 + + + +LR+++ Sbjct: 279 NTVAKDRFVSFLRQSL 294 >UniRef50_Q2GAY5 Transcriptional regulator, LysR family n=1 Tax=Novosphingobium aromaticivorans DSM 12444 RepID=Q2GAY5_NOVAD Length = 304 Score = 131 bits (331), Expect = 3e-29, Method: Composition-based stats. Identities = 34/269 (12%), Positives = 84/269 (31%), Gaps = 19/269 (7%) Query: 7 TLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTP 66 +D + + + S++ AA+ +N++ +VS ++A L LF S G+ TP Sbjct: 10 KIDPRAVSTFWKVCETGSISGAARALNLSQPSVSNTIALLEHRLGVTLFARSRSGIVLTP 69 Query: 67 LMVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKF----ELAAESPLMMIMLNALSKQIYQR 122 +++ +++ + + + ++ +L +I + Sbjct: 70 EGLALRDRAEAMVRLLETAVVEV---DHAARNIAGPLRIGGTPGALVSILPEAVARIEAQ 126 Query: 123 -YPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPC 181 P A + D D + +G +D+ + P + + D Sbjct: 127 VGPFALSVVERPDPQLGDLLRKGTIDLA--------CVTTEIEECPPDLAEITVSRDPFA 178 Query: 182 VWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRE-RTIAMSLPEFEQ 240 + + + H L +L P + + + +D + G + Sbjct: 179 LVVGRRHDGLGGRVSLRDVAGLPWVLPEAQGAFRRQVDALFLAAGVPVPRNVIRCDSLLT 238 Query: 241 SLFMAAQPDNLLLATAPRYCQYYNQLHQL 269 + + D + PR + Sbjct: 239 TKAIVRHGDR--VTILPRTVAAAELTIGV 265 >UniRef50_Q2JIR1 Transcriptional regulator, LysR family n=2 Tax=Synechococcus RepID=Q2JIR1_SYNJB Length = 293 Score = 131 bits (331), Expect = 3e-29, Method: Composition-based stats. Identities = 54/274 (19%), Positives = 112/274 (40%), Gaps = 16/274 (5%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++++ L L +++ + + AA +++++ SAVS+++A L L V G TP+ Sbjct: 1 MNISQLQTLVAVVERGNFSDAALQLHISQSAVSRAIASLEEELGVTLLVRGRFGARLTPV 60 Query: 68 MVSMEQNLAEWMQMSNLL-LDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + +++ + +Q+ + + + RG +AA +L + + Q++PQ Sbjct: 61 GERLLRHVRKMLQLREQMDYEANLEKGLRGGNVRVAAFRSAATHLLPPVIARFRQQFPQI 120 Query: 127 TIKLRNWDYDSLDA-ITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 T+ L D +++ + G+VDIG L + + D V + Sbjct: 121 TLTLTEEDPATVEHLLRSGQVDIGLLP----------LPRAGEDLQTWEIARDEFIVLVP 170 Query: 186 KDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMA 245 L +T + R+ +I + T A+ N + + +A + E + M Sbjct: 171 LSFGPLPETLTWEDLSRFSYILYNY-AECTTAVRNHWEAAHQTLKVAYLVKEDSTIVNMV 229 Query: 246 AQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFD 279 AQ L A PR + + LP+P + Sbjct: 230 AQ--GLGAAILPRLAAI-PIPEGIQIRRLPIPLE 260 >UniRef50_A0L2B3 Transcriptional regulator, LysR family n=9 Tax=Shewanella RepID=A0L2B3_SHESA Length = 322 Score = 131 bits (331), Expect = 3e-29, Method: Composition-based stats. Identities = 55/327 (16%), Positives = 110/327 (33%), Gaps = 15/327 (4%) Query: 1 MK-KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSP 59 M ++ LD+ L L L + +S T +K +++ +S+SL LR F D LF+ Sbjct: 1 MHINNMDNLDILSLKILVSLYENKSATYVSKALDIPAPKISRSLKNLRETFGDELFIRKK 60 Query: 60 LGLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSK 117 GL P + + + ++ S+ K E+AA + AL + Sbjct: 61 YGLFPNEFVTHLYPIAKQTIECSDK-FQKVRAANASQVKTHVEIAAPGLIAYAFPKALMQ 119 Query: 118 QIYQRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFS 177 I + I + W + I G+V +G +S L + Sbjct: 120 AIKEEQKPMQINITPWSLHTTQDIINGDVALGICCNKSTADVAAFGDKLQTTTLQRM--- 176 Query: 178 DVPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQ--SDTWALDNVLQELGRERTIAMSL 235 D + ++HP + L++ YP+++ + + G + +++ Sbjct: 177 DKVYLIASRNHPIFKREITLESIAEYPYVNTDLGNPSTRLSPYQEFCIKNGIKLNTEITI 236 Query: 236 PEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALP-LPFDESQQKKLEVPFTLLW 294 + + L + + + +L L L + L+ Sbjct: 237 TSISSLFEYLGESQTISLLPYRVVYEMVSDIPELHTCQLSQLEAERLYAHTEAPTIFLV- 295 Query: 295 HKRNSHNPKIV---WLRETIKNLYASM 318 ++N N WL IK + + Sbjct: 296 -QKNQPNKVNEDLLWLSGQIKKIVDHI 321 >UniRef50_Q1YFP6 Putative pca operon transcription factor PcaQ n=1 Tax=Aurantimonas manganoxydans SI85-9A1 RepID=Q1YFP6_MOBAS Length = 307 Score = 131 bits (330), Expect = 3e-29, Method: Composition-based stats. Identities = 50/315 (15%), Positives = 103/315 (32%), Gaps = 28/315 (8%) Query: 10 LNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMV 69 L L + + S+ KAA R+NV+ AVSK+L++L L G + TP+ Sbjct: 9 LRHLKTFIEVARSASLGKAAVRLNVSQPAVSKTLSELEEMLGARLIARGRGGATLTPVGR 68 Query: 70 SMEQNLAEWMQMSNLLLDKPHH-QTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQATI 128 + + + ++ L+ + A + ++ + ++ + P+A + Sbjct: 69 MFHSYASASLAALSQGIEGVAETLAASQLRLTIGALPSVAARIVPDAAIEMARTAPEAGL 128 Query: 129 KLRN-WDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKD 187 + + + L + G +D+ R + L+S+ + +R Sbjct: 129 TIVSGPNAYLLSQLASGALDLVIG--------RLGQPEAMAGFSFAQLYSERVSLVVRPG 180 Query: 188 HPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRER---TIAMSLPEFEQSLFM 244 HP L + YP I + + + G R I + F Sbjct: 181 HPLLSAA-DPALIAAYPLIFPDADAAIRTIAERYFIAHGLTRRRDRIETVVDSFG--RAY 237 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN--P 302 + D + ++ L LP+ + V T+ R + P Sbjct: 238 VRKTDAVWFISSGVVALDVADGM---LAELPVDM---AETLGPVGLTM----RGEGDPSP 287 Query: 303 KIVWLRETIKNLYAS 317 + I+ A+ Sbjct: 288 ALRLFIAAIRATVAA 302 >UniRef50_Q46S80 Transcriptional regulator, LysR family n=4 Tax=Cupriavidus RepID=Q46S80_RALEJ Length = 310 Score = 131 bits (330), Expect = 3e-29, Method: Composition-based stats. Identities = 48/271 (17%), Positives = 86/271 (31%), Gaps = 15/271 (5%) Query: 7 TLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTP 66 + L L + + +S T+AA + +T SAVS+S+ +L D LF + + T Sbjct: 2 NISLPQLKAFAAVARHKSFTRAAAELGLTQSAVSRSVRELEEEIDQRLFDRTTRQVELTD 61 Query: 67 LMVSMEQNLAEWMQMSNLLLDKPHHQT-PRGLKFELAAESPLMMIMLNALSKQIYQRYPQ 125 + Q + ++ L + P ++A + L + + A + +P Sbjct: 62 AGQHLSQRICHLIEEVEQTLRESQGAARPSQGMVQIATDPVLSSMSVPAWLAGCRKAWPA 121 Query: 126 ATIKLRNWDYDS-LDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 I L++ +S L ++ GEVD G + + E L D L Sbjct: 122 IAIHLKDRSQESVLQSVRSGEVDFGIATDP----------QSSDDLYCEPLCVDPYHAVL 171 Query: 185 RKDHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 HP ++ + ++ L L F Sbjct: 172 PAQHPLASRDAIAWGDLSNANVFTLDQQCGVQPVVEKALSHHHVRAGSLQLLGHFAAVFG 231 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVAL 274 M A L + P Q + L Sbjct: 232 MVAL--GLGIGVVPSRAQAGGLHPAAVMRPL 260 >UniRef50_Q0RL92 Putative uncharacterized protein n=1 Tax=Frankia alni ACN14a RepID=Q0RL92_FRAAA Length = 313 Score = 131 bits (330), Expect = 3e-29, Method: Composition-based stats. Identities = 48/315 (15%), Positives = 102/315 (32%), Gaps = 27/315 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L+ L + ++ + ++AA+R+ + A+S+S+ +L LFV S + TP Sbjct: 8 VELHHLRHFVAVAEDLNFSRAARRLCIAQPALSQSIKRLEVSLGLELFVRSRTNVELTPA 67 Query: 68 MVSMEQNLAEWMQMSNLL-LDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + L + L +P + +L A+ + + P Sbjct: 68 GHAFLVETKATLLQVERAELTARRVASGEQGSLRLGYVTPAVFEILPAIIRSFSRESPDV 127 Query: 127 TIKLRNWD-YDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + D +D + G++D+G LP + ++ + Sbjct: 128 EVIFEELPVEDQIDKLRGGDIDLGI---------IMGRRELPPEVHLHLIGHVDVAAAVP 178 Query: 186 KDHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQ---ELGRERTIAMSLPEFEQS 241 P + L P I + + D+ + LG T+A + Sbjct: 179 STWPLARREQIRLKDLRHQPLIMV-PRERHPDIYDDFMAACRRLGFSPTVAHRTSNPMTT 237 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 L + A + L + + +P+V P + W R + Sbjct: 238 LSLVAGGMGIGLVAGASTSFWVRDVTIVPIVDSP-------GDPIARSMFAAWIPRAQN- 289 Query: 302 PKIVWLRETIKNLYA 316 P L + ++ A Sbjct: 290 PA---LERLLSSVMA 301 >UniRef50_C1B6M2 Putative LysR family transcriptional regulator n=1 Tax=Rhodococcus opacus B4 RepID=C1B6M2_RHOOB Length = 303 Score = 131 bits (330), Expect = 3e-29, Method: Composition-based stats. Identities = 39/271 (14%), Positives = 84/271 (30%), Gaps = 16/271 (5%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +++ L L + SVT+AA+ +++ AV++ +A L LF S G+ T + Sbjct: 1 MEIRQLKALVAVADTGSVTRAAQVLHLVQPAVTRHIATLEDELGTQLFERSRAGMLLTEV 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + ++ + + + ++ LS I ++P Sbjct: 61 GEQVLERARRALREIERAKEVASTSDHSVSGHVSVGLLPSVARVIGPRLSDAIVSQHPGL 120 Query: 127 TIKL-RNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 ++L + + G VD + + A + + + Sbjct: 121 QLQLTVGYAGHLAKWLEGGAVDFAILFDQP----------MSSAFSMDPVAIEDLWAIAP 170 Query: 186 KDHPA-LHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 L+ L P I +D LG ++ + + + Sbjct: 171 PGSLEDTGAPIPLEHVLSQPMIIPNPPHGLRTLIDVAAARLGITPSVTLETNDATLQRAL 230 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALP 275 A D L + P H ++A+P Sbjct: 231 VA--DKLGWSMLPASMAT-AGAHGDEVIAVP 258 >UniRef50_B4WIK9 LysR substrate binding domain protein n=1 Tax=Synechococcus sp. PCC 7335 RepID=B4WIK9_9SYNE Length = 316 Score = 131 bits (330), Expect = 4e-29, Method: Composition-based stats. Identities = 48/282 (17%), Positives = 93/282 (32%), Gaps = 18/282 (6%) Query: 1 MKKSI-TTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSP 59 MK + + L+ L L + + + ++AA + ++ SAVS ++A L + LF Sbjct: 1 MKSNAQNRVKLSQLQILVAVAEYGNFSEAALSLGISQSAVSHAIASLENYLGIVLFNRGR 60 Query: 60 LGLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNALSKQ 118 G TP+ + + ++ +L + + +A+ + +L K Sbjct: 61 HGAILTPVGDRILMHAKTITNSTDAILQEAAAAKGLEKGQVRIASFRSISTHILPKAIKT 120 Query: 119 IYQRYPQATIKL--RNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLF 176 +Q+ P TI L + + A+ G DIG +L + L Sbjct: 121 FHQKLPGITISLTEHDTNKAVEQALKEGRADIGI-----------VLMPAGEGLTAWELL 169 Query: 177 SDVPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLP 236 D V L D + P I + + + LG + + Sbjct: 170 QDEFVVLLSPDTHLEGNSLTWRELSEQPLIMSPIDYPAMRPVYEHINALGYWLNVVNEVE 229 Query: 237 EFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPF 278 + + Q L P+ + + +LP P Sbjct: 230 TDAAIVNLVEQ--GLGGTILPKLAAE-PIPEAVQVFSLPEPL 268 >UniRef50_A7ZAS3 YybE n=1 Tax=Bacillus amyloliquefaciens FZB42 RepID=A7ZAS3_BACA2 Length = 296 Score = 131 bits (330), Expect = 4e-29, Method: Composition-based stats. Identities = 46/308 (14%), Positives = 104/308 (33%), Gaps = 24/308 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +D + + Q + Q + +T+AAK+++++ A+S+S++KL LF + Sbjct: 1 MDWHQINYFQTVAQVQHITQAAKQLSISQPALSRSISKLEDELGVQLFDRKGRNIYLNRY 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKP-HHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + ++ + + + P L+ L M M+ + YP Sbjct: 61 GKMFLHRVEQSIRQIEIGKQEVWNEIHPNSGTILLSFLPSLGMSMVPDVISSFQHMYPHV 120 Query: 127 TIKLRNWDYDS-LDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 +L ++ +T EVDI + L + + L ++ + + Sbjct: 121 NFQLTQASNQQIIEQLTSREVDIALTS----------LRDENDDVICQPLLTEELYLAVS 170 Query: 186 KDHPALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 +HP +L P IS + + ++ G + + + + Sbjct: 171 AEHPLASYDEIDLKMAEHEPFISFKDTNVLHGMIKELCEKAGFSPDVVFEGEDIVTASGL 230 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 L ++ P + ++ L+++ P E L W K +P Sbjct: 231 VGA--KLGVSLIPDL--HVFDKTKVKLLSVTNPI-------CEREIGLAWRKDGYLSPAA 279 Query: 305 VWLRETIK 312 I+ Sbjct: 280 ENFIAFIQ 287 >UniRef50_D1ABG1 Transcriptional regulator, MarR family n=2 Tax=Streptosporangineae RepID=D1ABG1_THECD Length = 327 Score = 131 bits (330), Expect = 4e-29, Method: Composition-based stats. Identities = 48/265 (18%), Positives = 91/265 (34%), Gaps = 10/265 (3%) Query: 13 LLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSME 72 L L + + S+T AA++++ TPSA+S+ LAKL PL V + G PT + Sbjct: 8 LRALVAVSRAGSITAAAEQMSFTPSALSQQLAKLEQEGGCPLLVRTASGAHPTEAGRVLL 67 Query: 73 QNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNALSKQIYQRYPQATIKLR 131 ++ + + R + + +L + P + L Sbjct: 68 RHAERVLGELRDAEEAVRTAAGRQPQHLSVGTFASAGKTLLPEALAAFRRVNPGVRLSLL 127 Query: 132 NWD-YDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPA 190 + + D +T ++D+ + R + E+L +D V L +HP Sbjct: 128 DLEPPRGYDLVTSRDLDLLVTHRYPGGSLPAA-----PGLRRELLLTDPLLVVLPPEHPL 182 Query: 191 LHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQPD 249 + + IS + L+ V + G A ++E +L + A Sbjct: 183 ADRPAVSFADLADEEWISGEPGVHNRVCLETVAAQTGVPVRTAYETHDYEVTLALIAA-- 240 Query: 250 NLLLATAPRYCQYYNQLHQLPLVAL 274 + +A P + L Sbjct: 241 GIGVALVPSTALRHTASPAFAARPL 265 >UniRef50_D2B2W6 Transcriptional regulator, LysR family n=17 Tax=Bacteria RepID=D2B2W6_STRRD Length = 324 Score = 131 bits (330), Expect = 4e-29, Method: Composition-based stats. Identities = 59/277 (21%), Positives = 95/277 (34%), Gaps = 16/277 (5%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 LDLN L L + SV AA + VTPSAVS+ LAKL L + G+ T Sbjct: 2 LDLNRLKALHAVSVYGSVGAAADALMVTPSAVSQQLAKLERETGATLLERNGRGVRLTDA 61 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRG----LKFELAAESPLMMIMLNALSKQIYQRY 123 + + + + + + A +L + +R+ Sbjct: 62 AGLLADHAERILALVETA---EADFEALRGEVVGRLSIGAFPTAARGLLPGALVHLRERH 118 Query: 124 PQATIKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCV 182 P ++L + + + + RGE+D+ + ++P + +LF D+ V Sbjct: 119 PDLRLQLIEREPERQVREVARGELDLAVIQDWVNRPM-----AIPDGLSRAMLFDDIADV 173 Query: 183 WLRKDHPALHQ-TWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQS 241 L + HP + L IS L L+ G E IA E+ Sbjct: 174 ILPESHPLAARSEIELAELSEDRWISSSPGTICHDWLVYTLRSAGLEPDIACMADEYPTQ 233 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPF 278 L + A A PR + + LP P Sbjct: 234 LALVAA--GQGCALIPRLGRDRVPSGVRAIPILPRPI 268 >UniRef50_Q1D8H0 Transcriptional regulator, LysR family n=2 Tax=Cystobacterineae RepID=Q1D8H0_MYXXD Length = 294 Score = 131 bits (330), Expect = 4e-29, Method: Composition-based stats. Identities = 33/269 (12%), Positives = 76/269 (28%), Gaps = 16/269 (5%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L + +AA+R++V+ +S+ + +L PLF + G+ T Sbjct: 1 MELRHLRYFSAVADTLHFGRAARRVHVSQPTLSQQIRQLEEELGAPLFERARSGVRLTQA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTP-RGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + ++ + + + ++L AL+ + + Sbjct: 61 GELFRTYASRALEDVDAGRVAVGALRGLTTGALRVGYPPSMRGVVLPALAAVLRRHSGLV 120 Query: 127 TIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRK 186 + G +D+G + ++ E +F + + K Sbjct: 121 LSAEEAVVRRVERRLADGRLDVGLGYAPAR----------SPDLEAEPVFDSKLALVVAK 170 Query: 187 DHPALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMA 245 HP +T + P + +D + +A+ L Sbjct: 171 GHPLAKLETVGAKPLAQEPFALLSRGLRVRARVDAWFAAIRIAPHVALESNAVATVLATV 230 Query: 246 AQPDNLLLATAPRYCQYYNQLHQLPLVAL 274 L + P L + L Sbjct: 231 RA--GLAVTVLPEP--QLADAAGLAVKRL 255 >UniRef50_A1WN33 Transcriptional regulator, LysR family n=1 Tax=Verminephrobacter eiseniae EF01-2 RepID=A1WN33_VEREI Length = 311 Score = 131 bits (330), Expect = 4e-29, Method: Composition-based stats. Identities = 43/293 (14%), Positives = 103/293 (35%), Gaps = 19/293 (6%) Query: 7 TLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTP 66 ++ + L + + S++ A + ++++ +A+++++ +L A LF G++ T Sbjct: 2 SISIRTLQYFNAVAETGSISAAMQTLDISQAAITEAIQRLEAHLGSMLFRRHARGMALTH 61 Query: 67 LMVSMEQNLAEWMQMSNLLLDKPH-HQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQ 125 ++ + + + + + A SPLM L L ++ + +P+ Sbjct: 62 AGHEFLRHSHLILNAVSSAENALAVRPDAMTGELSIGAVSPLMGYYLPGLLERFRRSFPR 121 Query: 126 ATIKLRNWDYDSLDAI-TRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 T+++ +++ + GE+D+ + A L +WL Sbjct: 122 VTVRIIEESGSTIEHLIVNGEIDVALTLTSHLENHH--------AFHTLQLVRSPWHLWL 173 Query: 185 RKDHPALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 H + + L I + ++ + D L+E I E Sbjct: 174 PTGHRLVGAKPVTLRELHNEAVIVLRNDELERTTGDLWLRE-SVRPRIVAKTRSVEAVRS 232 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHK 296 + A + + P L L+A PL + + + L+W + Sbjct: 233 LVATGN--GICVLPEVLFRQWSSEGLRLIAQPL-----RNEPATLELGLIWRR 278 >UniRef50_Q15NZ1 Transcriptional regulator, LysR family n=2 Tax=Gammaproteobacteria RepID=Q15NZ1_PSEA6 Length = 414 Score = 131 bits (330), Expect = 4e-29, Method: Composition-based stats. Identities = 51/310 (16%), Positives = 108/310 (34%), Gaps = 20/310 (6%) Query: 13 LLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSME 72 L L ++V AA ++NVT +A+ S+ +L W LF + P G+ PTP + Sbjct: 118 LAAFISLYHCKNVHSAADQLNVTKAAIYSSVRQLEVWLGIFLFESEPQGVVPTPYCNVLA 177 Query: 73 QNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNALSKQIYQRYPQATIKLR 131 Q+L L+ + ++ + + + + R Sbjct: 178 QHLKLAFSEIRYALEDLANLDGVTSGSVKIGTLPYTRTYLTPQAINLLLDEHHNLDVSTR 237 Query: 132 NWDYDSLD-AITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPA 190 Y+ L+ ++ G++D S ++ E+L D V R +HP Sbjct: 238 EGPYNLLEVSLRNGDIDFIIGAIRP--------SEKDSDLNTEILLEDKLSVIARSNHPL 289 Query: 191 LHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRE-RTIAMSLPEFEQSLFMAAQP 248 + + +L Y + +++ G T ++ + Sbjct: 290 MGRENLSLGDLSDYGWVLPELHTPSGRLFLELMKAHGLPIPTHSIHTSSLSMVRGLLMGS 349 Query: 249 DNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWLR 308 D + ++ YY++ H+L L LP+ + + T+ +R +P Sbjct: 350 DR--VTLLSKHQIYYDRNHEL-LDVLPVDI---GETYRPIGITM--RRRTEPSPAAQLFL 401 Query: 309 ETIKNLYASM 318 + ++ + S+ Sbjct: 402 DKLRQVADSV 411 Score = 68.5 bits (167), Expect = 3e-10, Method: Composition-based stats. Identities = 17/81 (20%), Positives = 30/81 (37%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 L L L + + +SVTKAA +N + +A++KS+ L + LF G+ Sbjct: 12 LSLRQLRFFMSVYKLKSVTKAANELNRSQTAITKSITDLEKSLNVSLFDRVATGMIANAY 71 Query: 68 MVSMEQNLAEWMQMSNLLLDK 88 + + Sbjct: 72 GEAFATRTQRAIDEFQKASQS 92 >UniRef50_A6GF05 Transcriptional Regulator, LysR family protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GF05_9DELT Length = 302 Score = 131 bits (330), Expect = 4e-29, Method: Composition-based stats. Identities = 49/319 (15%), Positives = 100/319 (31%), Gaps = 23/319 (7%) Query: 1 MKKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPL 60 M +LD + L +++ S++ AA+R +++ A+S+ + +L A LF + Sbjct: 1 MHM---SLDTHRLRSFLHVVELGSLSAAARRAHLSQPALSRHVQQLEADMGVALFERTGR 57 Query: 61 GLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTP-RGLKFELAAESPLMMIMLNALSKQI 119 G+ T + + + L + Q LA + M + + + Sbjct: 58 GMRVTDAGALLAERARPLLTQLEQLASEVAAQAEVVTGSVSLAVPPSVGMALPADVIEVF 117 Query: 120 YQRYPQATIK-LRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSD 178 + +PQ ++ + DA+ RG +D+G + A+ E L+ + Sbjct: 118 REAHPQVALRVVVALSGAIHDALVRGSLDLGILYQPVR----------SPAVRTEALWRE 167 Query: 179 VPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEF 238 L L P I ++ LG + + Sbjct: 168 SLWCVGGPGEFEAGSALRLRAVLGEPLILPAPRHGLRAFVEGHAARLGAGVDVPVEADSL 227 Query: 239 EQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRN 298 + L + + L A + L A + ++K L L W Sbjct: 228 QLLLELVRRGAGRTLLPARAFADELAAG---RLSAARVTHPALERKTL-----LAWSAER 279 Query: 299 SHNPKIVWLRETIKNLYAS 317 + L E ++ Sbjct: 280 HMSRAGRALAEVVRGRARR 298 >UniRef50_Q1AUB8 Transcriptional regulator, LysR family n=2 Tax=Bacteria RepID=Q1AUB8_RUBXD Length = 320 Score = 130 bits (329), Expect = 4e-29, Method: Composition-based stats. Identities = 40/262 (15%), Positives = 79/262 (30%), Gaps = 16/262 (6%) Query: 10 LNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMV 69 L C + + ++++AA+ + +T ++ L L D LFV + G+ T Sbjct: 3 YRQLECFLAVARTGNLSRAAEEMYLTQPTLTARLKALEEELGDQLFVRTSRGMRLTEAGR 62 Query: 70 SMEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNALSKQIYQRYPQATI 128 + + K + A + L L ++ YP+ + Sbjct: 63 EFLPYAERVVSSFEEGKRRLEELRGASGGKLVVGASPGVGTYALPGLLERFVGAYPKVNV 122 Query: 129 KLRN-WDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKD 187 +R D L+ + R EV +G + H ++ L+ D + + + Sbjct: 123 SVRTGHSEDILEMVLREEVHLGLTREMRH-----------PEVESVPLYEDELVLVVAPE 171 Query: 188 HPALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAA 246 H + L I + S + G + + E + M Sbjct: 172 HRFTQRGSAGLAEIGEEQLILFDNDSSYYEQTQALFTSAGIRELRTLEVDNIEAAKRMVE 231 Query: 247 QPDNLLLATAPRYCQYYNQLHQ 268 L +A PR Sbjct: 232 H--RLGIAFLPRSAIVRAVSAG 251 >UniRef50_C0WB23 Transcriptional regulator n=1 Tax=Acidaminococcus sp. D21 RepID=C0WB23_9FIRM Length = 298 Score = 130 bits (329), Expect = 5e-29, Method: Composition-based stats. Identities = 49/313 (15%), Positives = 112/313 (35%), Gaps = 30/313 (9%) Query: 12 LLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSM 71 LL + L + T+AA+ ++++ ++S S+A+L LF ++ TP Sbjct: 5 QLLYFETLARVLHYTRAAEELHISQPSLSYSIAELEKELGVSLFKREKRKIALTPYGERF 64 Query: 72 EQNLAEWMQMSN---LLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQATI 128 + + M + L + + P + L + ++ + K +Y+ I Sbjct: 65 LPYVKKTMALLEEGKATLRQMKDKAP--MNIRLGYFHSISASLVPPIVKALYEEKENQDI 122 Query: 129 KLR---NWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + + + Y+ + + G++D+ F+ ++ PL + + Sbjct: 123 RFQFMEDTSYNICEQLKNGKLDLAFTTGRDEALDGVTMTKQPLYLTVYL----------- 171 Query: 186 KDHPALHQ-TWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 +HP + + F + P + + S LD + + + E +L Sbjct: 172 -EHPLAKKNSVTFADFAKEPMVLLNKTSSLRAQLDQAFIKRSMIPNMVFEVQECNTALQY 230 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 A ++ P + +VA+P+ +++ L W K +P + Sbjct: 231 VAL--KFGVSILPEVPAMQTE----RVVAIPI---NENEQEFFRTVYLSWDKTRPLSPVV 281 Query: 305 VWLRETIKNLYAS 317 +R I YA+ Sbjct: 282 KKVRNWIVQHYAA 294 >UniRef50_B8IWD6 Transcriptional regulator, LysR family n=1 Tax=Methylobacterium nodulans ORS 2060 RepID=B8IWD6_METNO Length = 304 Score = 130 bits (329), Expect = 5e-29, Method: Composition-based stats. Identities = 47/280 (16%), Positives = 95/280 (33%), Gaps = 15/280 (5%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 + L LL L L + RS+ KAA +N+T +K L L LF G+ P Sbjct: 2 LRRLKSRQLLLLIALSEARSLRKAAAALNMTQPTATKLLQNLENNVGLALFERGRRGMQP 61 Query: 65 TPLMVSMEQNLAEWMQMSNLL-LDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRY 123 T + ++ + N L+ + + + A + ++L ++ Q++ Sbjct: 62 TIYGEVIIRHARLVLADLNRTRLELQSLSSGGTGRIRIGAVISAIPVLLARAVARLKQQH 121 Query: 124 PQATIKL-RNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCV 182 ++ + + A+ +GE+D+ + +YE L + + Sbjct: 122 SGLSVTIDVGTSDALVPALAKGELDVLLARPLVLADR--------PEFNYEELTEEPIQI 173 Query: 183 WLRKDHPALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGR-ERTIAMSLPEFEQ 240 R H + L + L+ + ++G E + Sbjct: 174 VARAGHALAASERLRLGDLAGSAWTLLPPGTPMRKVLEPIFAQIGPGEPRNVVETSSIMT 233 Query: 241 SLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDE 280 + + + + +LA P +N H L L LP+ Sbjct: 234 MIALLQESE--MLAVMPADVTNFNTRHGL-LCRLPISLPP 270 >UniRef50_B7RS92 Regulatory protein, LysR:LysR, substrate-binding n=1 Tax=Roseobacter sp. GAI101 RepID=B7RS92_9RHOB Length = 300 Score = 130 bits (329), Expect = 5e-29, Method: Composition-based stats. Identities = 49/267 (18%), Positives = 88/267 (32%), Gaps = 17/267 (6%) Query: 13 LLCLQLLM---QERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMV 69 LL Q ++ QERS AA ++ ++PSA+S+ + L A LF + T Sbjct: 8 LLDFQAVLILSQERSFRAAADQLGLSPSALSRQITSLEARLGSRLFDRDTRSVEITVAGS 67 Query: 70 SMEQNLAEWMQMSNLLLDKPHHQTPRGL-KFELAAESPLMMIMLNALSKQIYQRYPQATI 128 + Q + + L + + +A + +L + + +P+ + Sbjct: 68 AFAQIAERIINTAEDGLAEFGSYQSAQRGRLTIAGLPSITASLLPQILRNFTADHPEIDL 127 Query: 129 KLRN-WDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKD 187 K+ + LDA+ G+ DIGF+ RSR E L D D Sbjct: 128 KIIDALSGSVLDAVDSGQADIGFTAGTVTARSRLAF---------EPLMEDEFVALGMPD 178 Query: 188 HPALHQTW-NLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAA 246 P + + P I + S +D Q G + + + + Sbjct: 179 GPLAEDRAYGWEELVAMPFIVMETGTSVRELIDGTCQRFGHSLSPRFEVAHLATAGALV- 237 Query: 247 QPDNLLLATAPRYCQYYNQLHQLPLVA 273 L + PR + + Sbjct: 238 -SAGLGITVLPRLTLAILRSETFVIRD 263 >UniRef50_C0Z7P7 Probable transcriptional regulator n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0Z7P7_BREBN Length = 290 Score = 130 bits (329), Expect = 5e-29, Method: Composition-based stats. Identities = 35/245 (14%), Positives = 74/245 (30%), Gaps = 15/245 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +D+ L + +E +T AAKR+N+ +S+ L ++ L S + T Sbjct: 1 MDIRQLRYFIAIAEEGQITGAAKRLNMAQPPLSQQLKQMEEELGTMLVERSGKQIVLTEA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKP-HHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 +++ + + L + + L L + Q+YP Sbjct: 61 GITLYKQALNIVHQMEEALSEVKETGEGIRGTLSIGVS-ALSAYRLPEQIRVFQQKYPLI 119 Query: 127 TIKLRNWDYDSLDA-ITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 T K+ D L+ + R +++ + ++ L + + + Sbjct: 120 TYKIWKGDTQLLNQWLERRTIEVAIVRLPHSLNNCTMIP----------LEEEDFVLIVP 169 Query: 186 KDHPAL-HQTWNLDTFLRYPHISICWEQ-SDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 P + + P I + LG E + P+ + Sbjct: 170 ATSPYADRKAIEMREIAELPLIMPSTPGLGIYDLIIKEFSRLGVEPHVICECPDISLIVS 229 Query: 244 MAAQP 248 M A Sbjct: 230 MVASS 234 >UniRef50_B6R5Q8 Transcriptional regulator, LysR family n=1 Tax=Pseudovibrio sp. JE062 RepID=B6R5Q8_9RHOB Length = 308 Score = 130 bits (329), Expect = 5e-29, Method: Composition-based stats. Identities = 41/241 (17%), Positives = 77/241 (31%), Gaps = 12/241 (4%) Query: 7 TLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTP 66 L L L+ ++ R T AA R+ ++ AVS+++ L LF L PT Sbjct: 9 RLSLREFEVLRAVISVRKTTAAAARLGISQPAVSRAIKHLEERLGKTLFNRDSGRLVPTS 68 Query: 67 LMVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 +++ + L +M + ++ LAA + L + + + YP Sbjct: 69 DALALNEKLEPVFEMLAGIENETFVSQHSSKPLRLAAPPTISHRFLLGVIAEFIKAYPGQ 128 Query: 127 TIKL-RNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 ++L D + + G D+G + S L L Sbjct: 129 KVELEIGTSSDVRNHVAEGHADLGITDGLSKHAGLTLEPLRSAIAHA----------VLH 178 Query: 186 KDHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 +DHP + + F +++ L+ + E G I + Sbjct: 179 RDHPLASKAFIEPEDFDGQDFVALTRRFPVRAILERMFAERGIRPNIVAESSTAVSVSEL 238 Query: 245 A 245 Sbjct: 239 V 239 >UniRef50_Q2W289 Transcriptional regulator n=2 Tax=Magnetospirillum RepID=Q2W289_MAGSA Length = 324 Score = 130 bits (329), Expect = 5e-29, Method: Composition-based stats. Identities = 52/294 (17%), Positives = 105/294 (35%), Gaps = 16/294 (5%) Query: 6 TTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPT 65 T+D+ L +++ S+TKAA+ ++V A+S L +L F PL + G+ PT Sbjct: 19 RTMDIRQLRYFLGIVEHGSLTKAAEALHVAQPALSLHLKRLEEEFGCPLVHRTARGVVPT 78 Query: 66 PLMVSMEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQIYQRYP 124 + + ++ L D+ + + L ++ L+ + + +P Sbjct: 79 ESGLRLAVRAGVLVERMANLKDEIRGLEAAPAGPAVIGIPTSLGPMLTVPLALAVRRLHP 138 Query: 125 QATIKLRN-WDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVW 183 +++ L+ + G VD+ H P + + + + Sbjct: 139 SIHLRVVEGLSGHMLEWVLSGSVDMALVFGSEH----------PAGLATRFIARERLALV 188 Query: 184 LRKDHPALHQT--WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQS 241 KD P L+ +L L P I ++ + LG E ++ + + +Q Sbjct: 189 GPKDDPLLNGRRDMDLAHVLALPLILPGRPHGVRAEVERAGRALGTEPSVVIEIDALDQI 248 Query: 242 LFMAAQPDNLLLATAP--RYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLL 293 + A + + R+ L LP+V + S L P +L Sbjct: 249 KALVAAGAGYTVLSERYARFGAEAANLDALPIVGPEIERTISLAHALGRPLSLA 302 >UniRef50_UPI0001C30F27 transcriptional regulator, LysR family n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C30F27 Length = 300 Score = 130 bits (329), Expect = 5e-29, Method: Composition-based stats. Identities = 47/310 (15%), Positives = 90/310 (29%), Gaps = 21/310 (6%) Query: 13 LLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSME 72 L + + VT AA ++V+ A+S++LA+++A PLF L Sbjct: 6 LRWFVAVAESEHVTAAAAELHVSQPALSRALARVQAHVGVPLFDRRGRRLRLNRYGRLYL 65 Query: 73 QNLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQIYQRYPQATIKL 130 + + + T LA L ++ AL + PQ ++L Sbjct: 66 DHARRSLADLDAGTQALADATGTAGGGTVVLAFLHTLGSWLVPALLRGFGAAEPQIALEL 125 Query: 131 RNWD-YDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHP 189 + L + GEVD+ + I+++ L + + H Sbjct: 126 AQGSASEMLAQLRAGEVDLILTSPRPD----------DPEIEWKPLGREPLRAVVAPGHA 175 Query: 190 A-LHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQP 248 + L +++ E D + G IA + + A Sbjct: 176 LAARKRIRLADLAEERFVAMKPEYGLRGLTDQLCAAAGFNPRIAFEGDDIGTLRGLVAAG 235 Query: 249 DNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWLR 308 + L P + P + L W + +P R Sbjct: 236 LGVALLPPPHSA-------GAEIEQPATPHLHLADRGAARTLGLAWDRTRYRSPATETFR 288 Query: 309 ETIKNLYASM 318 + A++ Sbjct: 289 AFVAAHGAAL 298 >UniRef50_C6J455 LysR family transcriptional regulator n=2 Tax=Bacillales RepID=C6J455_9BACL Length = 307 Score = 130 bits (329), Expect = 5e-29, Method: Composition-based stats. Identities = 46/282 (16%), Positives = 96/282 (34%), Gaps = 19/282 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L LL + +E++ ++AA ++++ ++S+ L+KL LF + + T Sbjct: 1 MELRQLLYTLKIAEEKNFSRAADKLHIAQPSLSQQLSKLEQELGVKLFQRNTSTVELTYA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTP-RGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 S + + M L + + R + + + +L + YP Sbjct: 61 GASFIAHAQKIMDAVAQLRQEMDDISQLRAGRVVVGSMPITGSHLLPYVLPAFKASYPNI 120 Query: 127 TIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRK 186 + L +L+ + + S L L + YE + ++ + + Sbjct: 121 QVTLLEDTSLNLEKL---------TAEGGTDLSLLSLPLLEPTLSYEPIGEEIIDLAVPP 171 Query: 187 DHPA------LHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQ 240 DHP L Q + P I + Q ++ +E G E + E Sbjct: 172 DHPLTKTPGVLEQGVEMKQLENEPFIVLKKGQGFRKMTADLCREAGFEPNVVFESNNIET 231 Query: 241 SLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQ 282 + A + + PR+ + +L LPL Sbjct: 232 VQSLVAA--GMGITLVPRFIAR-AKRSELIPAYLPLAAPAPS 270 >UniRef50_B1KBR5 Transcriptional regulator, LysR family n=11 Tax=Burkholderia RepID=B1KBR5_BURCC Length = 304 Score = 130 bits (329), Expect = 5e-29, Method: Composition-based stats. Identities = 44/287 (15%), Positives = 90/287 (31%), Gaps = 14/287 (4%) Query: 10 LNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMV 69 + + + +MQ +VT+AA+ ++++ AVS+ +A L LF +PT Sbjct: 8 IRQIEAFRAVMQRHTVTRAARDLHISQPAVSRLIADLEDRVGFVLFERQQGRFTPTAQAR 67 Query: 70 SMEQNLAEWMQMSNLLLDKPHHQTPRGL-KFELAAESPLMMIMLNALSKQIYQRYPQATI 128 + + + + + +A + + +L L + +P I Sbjct: 68 VLYEEVERAFVGLDRVAQAAEQIRAMRRGTLRVAGSPAVALDLLPQLVTRFSHAHPGVDI 127 Query: 129 KLR-NWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKD 187 L + +D + G+ D+G A+ E L + + Sbjct: 128 TLLAHSASTVVDKVASGQCDVGLIAEPVP----------HPAVRGERLAEAAMRCIVPRG 177 Query: 188 HPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAA 246 H + IS A+D V E G R +++ + + A Sbjct: 178 HRLTRKRVVRPADLRDEAFISFPPSFEARSAIDRVFVEAGVSRVLSIEAQLSQTIVAFVA 237 Query: 247 QPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLL 293 + L P Y Q + +P P +++ Sbjct: 238 NGAGVAL-IDPVTAAYAGQRVAVKPFEPAVPDHFYLVTSASQPLSMI 283 >UniRef50_Q126R0 Transcriptional regulator, LysR family n=10 Tax=Proteobacteria RepID=Q126R0_POLSJ Length = 356 Score = 130 bits (329), Expect = 5e-29, Method: Composition-based stats. Identities = 50/287 (17%), Positives = 99/287 (34%), Gaps = 13/287 (4%) Query: 6 TTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPT 65 + + L L + L Q R + + A+ ++V+ AVSK L ++ + D LF S G PT Sbjct: 10 SNIKLRHLQLMVALDQFRHLGRTAEFLSVSQPAVSKMLTEVESMLDLTLFERSTRGTVPT 69 Query: 66 PLMVSMEQNLAEWMQMSNLLLDKPHHQTP-RGLKFELAAESPLMMIMLNALSKQIYQRYP 124 ++ + + D+ + + A M ++L K + QR Sbjct: 70 SSGQAIVRFARSVLAEYERTRDEIAAVASGAAGRTRVGAMVVAMPVLLAGAVKLLKQRSA 129 Query: 125 QATIKLRNWD-YDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVW 183 QAT+ + D L + GE+D+ E + + E LF++ V Sbjct: 130 QATVLVEEGDLTHLLPKLRLGELDLFVGRLEPGYAA--------PDLVTEALFNEPMKVV 181 Query: 184 LRKDHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTI-AMSLPEFEQS 241 +R+ H +T P + S ++ G + + F Sbjct: 182 VRRGHALARRKTPGWADLAAMPCVLPPPWASLRVKIEQTFFRHGLNPPVDIVETSSFLVL 241 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEV 288 Q + A ++ + ++ + +P + + V Sbjct: 242 STFVQQREAAGF-LARSVALHFEREGLFDILPIEVPIELPPIGLITV 287 >UniRef50_C8WUA0 Transcriptional regulator, LysR family n=1 Tax=Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 RepID=C8WUA0_ALIAD Length = 298 Score = 130 bits (329), Expect = 5e-29, Method: Composition-based stats. Identities = 45/300 (15%), Positives = 101/300 (33%), Gaps = 28/300 (9%) Query: 10 LNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMV 69 L L + +E +AAKR+ +T +S+ + KL LF + + T Sbjct: 5 LRQLEYFVAVAEELHFGRAAKRLGLTQPPLSQQIQKLEDEIGVTLFDRTNRRVQLTHAGR 64 Query: 70 SMEQNLAEWMQMSNLLLDKPHHQTP-RGLKFELAAESPLMMIMLNALSKQIYQRYPQATI 128 + + + + + R + +A L + + +R+P + Sbjct: 65 VLLEEARKVLAHVQTAVKAARDAAAGRVGRLSVAFVGSATYGWLPEVIRAYQERHPDVEL 124 Query: 129 KLRNWD-YDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKD 187 LR ++A+T GE+D+G L + + ++ D + + Sbjct: 125 VLREMSTPAQMEALTAGELDVGV----------LRLPAQHPDLHVRLVERDDCVAVVPSE 174 Query: 188 HPAL-HQTWNLDTFLRYPHISIC---WEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 HP + L P + + W + + + LG E + + + E + ++ Sbjct: 175 HPLATRSSLFLVELAEEPFVLVSRAIWPGLYDGFI-TLARALGFEPRVRLEVTEVQTAVG 233 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 + A L ++ P + + + + + V + W +R +P Sbjct: 234 LVAA--GLGVSIVPSATE--------RVHRRDVRYLHIDGQSPTVELGVAW-RRRDTSPL 282 >UniRef50_Q2T4U0 Transcriptional regulator, LysR family n=2 Tax=Burkholderia RepID=Q2T4U0_BURTA Length = 299 Score = 130 bits (329), Expect = 5e-29, Method: Composition-based stats. Identities = 53/314 (16%), Positives = 102/314 (32%), Gaps = 19/314 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++ L +++ SVT A+ R++V+ A+++ + L LF P G+SPT Sbjct: 1 MNFTHLSAFLAVVEAGSVTGASARLHVSQPALTREIRDLEERLGVVLFDRRPRGMSPTEA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRGL-KFELAAESPLMMIMLNALSKQIYQRYPQA 126 + +++ + +LAA + +L + RYP Sbjct: 61 GRLLAGYAKRIFALTDEAEAALDEFSGLVRGNLKLAASRTIGSYLLPPVLDVFCDRYPGV 120 Query: 127 TIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRK 186 TI + + + ++A E E A D V D Sbjct: 121 TIDVAEMNTELVEA--------ALLTYERQLGFVEGAYDT-TAFDSMVFGRDTLLAVAAS 171 Query: 187 DHPALHQ-TWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMA 245 HP + + +S A++ E G E +S+ E + Sbjct: 172 SHPLARKHRVGVQDIADCDVLSREPGSGTRNAVETAFAEHGLEFAPRLSVGSAEAMNRLL 231 Query: 246 AQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIV 305 + + + +L LV L + +E T++WHK + +P Sbjct: 232 LRGNAIAWV---SRFTIEAELEAGALVPLRV-----TDMTVERDLTIIWHKGATLSPSAR 283 Query: 306 WLRETIKNLYASMA 319 R+ + + A Sbjct: 284 IFRDLLVEQARARA 297 >UniRef50_A5V773 Transcriptional regulator, LysR family n=2 Tax=Alphaproteobacteria RepID=A5V773_SPHWW Length = 351 Score = 130 bits (329), Expect = 6e-29, Method: Composition-based stats. Identities = 44/274 (16%), Positives = 96/274 (35%), Gaps = 13/274 (4%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 ++ L + L + + S+ AA + +T A++K+L + A LF + G+ P Sbjct: 1 MSRLTMRHLRIVLAITDGGSLVAAAHTLCMTQPAITKALQETEALLQIELFSRTNRGVVP 60 Query: 65 TPLMVSMEQNLAEWMQMSNLLLDKPHHQ-TPRGLKFELAAESPLMMIMLNALSKQIYQRY 123 TP +++ + ++ H G + + +L + + Sbjct: 61 TPAGLALAAHARLITAQIGHAAEEIHDLRDGMGGRIAVGTLLSASADLLPRAIAMLRRDR 120 Query: 124 PQATIKLRN-WDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCV 182 P+ + + + L + G++D+ + + + EVL +DV CV Sbjct: 121 PKLVVTIVEGTNDRLLPDLRLGKLDMVVGRLPEYHELQ--------GLHQEVLLTDVSCV 172 Query: 183 WLRKDHPALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTI-AMSLPEFEQ 240 +R HP + L + I E + +D ++ G E A+ Sbjct: 173 IVRPGHPLVGRDPLRLADLAGWDWILPRLETTLRRHIDQAFRDEGVEPPPHAVESVSQLT 232 Query: 241 SLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVAL 274 + + D L + + + L ++ L Sbjct: 233 NRSLVMDADYLGI-LPWQLAHREARAGHLVILPL 265 >UniRef50_B1ZUQ0 Transcriptional regulator, LysR family n=1 Tax=Opitutus terrae PB90-1 RepID=B1ZUQ0_OPITP Length = 301 Score = 130 bits (328), Expect = 6e-29, Method: Composition-based stats. Identities = 35/311 (11%), Positives = 93/311 (29%), Gaps = 21/311 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L + + T+AA+R NVT ++S+ + L LF T Sbjct: 1 MELYQLRYAVAVADTGNFTRAAERCNVTQPSLSQQIINLEKEVGHKLFHRLGRRAVLTEA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQAT 127 + + + + + + A + +L + + + P Sbjct: 61 GAVFIERARQIVYDVENAAKELSDHPSLDRRITVGAIQTVAPYLLLPMIEVCKRELPNLQ 120 Query: 128 IK-LRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRK 186 I + ++ D + + G++D+ L + E L ++ + + K Sbjct: 121 INLIEDFRVDLVHGVVEGDLDLAI----------VTLPVDDPRVSVEPLMTEPLLLVVGK 170 Query: 187 DHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMA 245 +HP + +++ +++ + + + + + + + Sbjct: 171 NHPFATRKEISINDLADETFVTMGESSTLAAQIRSFFGGHNFQPKVGYRCAQVATLKTLV 230 Query: 246 AQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIV 305 A L ++ PR Q L + L ++ H + + Sbjct: 231 AM--GLAISILPRVDQEEKDRETLTYLRL-------TGSAPTRELVVVRHLQRYQSRGAQ 281 Query: 306 WLRETIKNLYA 316 + + Sbjct: 282 QFLQLLHEQVR 292 >UniRef50_A3VLR4 Putative LysR family transcriptional regulator n=1 Tax=Rhodobacterales bacterium HTCC2654 RepID=A3VLR4_9RHOB Length = 301 Score = 130 bits (328), Expect = 6e-29, Method: Composition-based stats. Identities = 42/263 (15%), Positives = 92/263 (34%), Gaps = 14/263 (5%) Query: 11 NLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVS 70 L + Q RS+ +AA+++++T A+S+ + L LF PLG+S TP + Sbjct: 6 RHLSAFVTVAQARSLGRAAEQLHITQPALSRIIRNLEETVGAQLFERHPLGMSLTPHGQA 65 Query: 71 MEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQIYQRYPQATIK 129 + + L++ + + + + ++ Q+ +P ++ Sbjct: 66 LLPRAELLLADWGAALEELRSISGATTGTLRIGCVAGAVDPLIRHAMSQMLDAHPNIQLR 125 Query: 130 LRN-WDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDH 188 + + + +D + G +D+ +G S ++ + SD V++R+DH Sbjct: 126 VTDAIEDRLIDDLLAGRIDLAVAGAVSGASQF--------DLEQVYVTSDWWQVYVRRDH 177 Query: 189 PALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRE-RTIAMSLPEFEQSLFMAA 246 P L RY + + + + L IA+ ++ Sbjct: 178 PLQDMARPALSDLARYRWVMVPEDSIAHFKLREAYHATSMTVPDIAVETRSLTVAVNALL 237 Query: 247 QPDNLLLATAPRYCQYYNQLHQL 269 L+ P + L Sbjct: 238 AS--PLVTLMPESLLRHEVELGL 258 >UniRef50_A6VV39 Transcriptional regulator, LysR family n=6 Tax=Gammaproteobacteria RepID=A6VV39_MARMS Length = 295 Score = 130 bits (328), Expect = 6e-29, Method: Composition-based stats. Identities = 46/309 (14%), Positives = 97/309 (31%), Gaps = 25/309 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +D+ L + + S TKAA+++ V AVS ++ KL A L + + T Sbjct: 1 MDIKPLRYFIAIAKTESFTKAAQQLGVAQPAVSMAIKKLEADLGLTLIHRADRNIGLTDE 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTP-RGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + + +Q ++ L + + + S L + +YP Sbjct: 61 GKKLLIHAEKIIQATDDALLEMSELKGLSQGEVRVGIPSMLGSYYFPPILMAFRHKYPTI 120 Query: 127 TIKLRNWDYDSLD-AITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 T+K+ L + GE+D+ E+ LP ++ + L + V + Sbjct: 121 TLKVIEGGTWQLQKMLENGELDLSVIVAET----------LPDGLETQALIREEMLVTIA 170 Query: 186 KDHPALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 DHP + + + F + +D + + + I + Sbjct: 171 TDHPFSQLEKISPEAFFDEELVMFKEGYFHRRIVDKLAKACKKTPKIGFETNLIPLIKSI 230 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 Q ++T + L + P + + W K + + Sbjct: 231 TQQ--GFGISTL--LAMVIEEDDDLITRSFDPPI--------WLDLGIAWRKDSYLSKAN 278 Query: 305 VWLRETIKN 313 E + Sbjct: 279 RAFLEFVNE 287 >UniRef50_A5WE98 Transcriptional regulator, LysR family n=2 Tax=Psychrobacter RepID=A5WE98_PSYWF Length = 321 Score = 130 bits (328), Expect = 7e-29, Method: Composition-based stats. Identities = 49/258 (18%), Positives = 94/258 (36%), Gaps = 21/258 (8%) Query: 7 TLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTP 66 + L L + + S T+A+ ++++T SAVS + +L + LF + LS + Sbjct: 2 NITLRQLNAFIHVAETGSFTRASDKMHLTQSAVSGLIKELENTLNVVLFDRTTRQLSLSV 61 Query: 67 LMVSMEQNLAEWMQMSNLLLDKPHHQTP-RGLKFELAAESPLMMIMLNALSKQIYQRYPQ 125 + + + L ++ T LA + A+ Q + YP+ Sbjct: 62 VGHHLLPQARRVLNELTLFENEASSLTSLAQGTVRLAVSQFAASS-MPAVIAQFAKLYPE 120 Query: 126 ATIKLRNWD-YDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 + L + D L I EVD+G + ++ + ++L+ C+ L Sbjct: 121 IKVSLLDCSAEDVLQHIENIEVDLGVGVELNTDQN-------DENLSADLLYELPFCIVL 173 Query: 185 RKDHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRE-----RTIAMSLPEF 238 + HP + D L P I++ + +D+V EL + A + Sbjct: 174 PQAHPLACEPVVKWDDLLGLPLITL-----NGPFIDHVTLELSEPMALQIKNAAYKVNFM 228 Query: 239 EQSLFMAAQPDNLLLATA 256 +L M Q + L Sbjct: 229 STALEMTRQGFGVTLCLP 246 >UniRef50_Q3K9B5 Putative LysR family transcriptional regulator n=1 Tax=Pseudomonas fluorescens Pf0-1 RepID=Q3K9B5_PSEPF Length = 319 Score = 130 bits (328), Expect = 7e-29, Method: Composition-based stats. Identities = 50/296 (16%), Positives = 103/296 (34%), Gaps = 23/296 (7%) Query: 6 TTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPT 65 LD NLL ++ QE S+++AA R+++T SAVS++L +L D L S T Sbjct: 16 DRLDWNLLRTYLVIGQEGSMSRAAARLHITQSAVSQALKRLEEQLDCVLIARSGRRFDLT 75 Query: 66 PLMVSMEQNLAEWMQMSNLLLDKPHHQ-TPRGLKFELAAESPLMMIMLNALSKQIYQRYP 124 + + A+ + L ++ K + S + + ++ +P Sbjct: 76 ETGEEVLRIAADIYGDISRLGTVVENRHDDVVGKIRILTVSGVQARHYDEFLADFHETHP 135 Query: 125 QATIKL-RNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVW 183 + +++ + + ++ + +G L ++ VLF + + Sbjct: 136 KIELEVEVMGSSNIISSLLQKTATVGVG----------LCRLPQPRLEQRVLFRERYAYF 185 Query: 184 LRKDHPALHQT-WNLDTFLRYPHISICWE--QSDTWALDNVLQELGRERTIAMSLPEFEQ 240 + H Q L+ +S + + L + G I S FE+ Sbjct: 186 CGQRHRLFGQQNLTLEQLAAENFVSFTSDQLGGNLSPLTLFRDQQGFTGKIVASSTSFEE 245 Query: 241 SLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHK 296 + + P + + L L LP + ++ LLW++ Sbjct: 246 IYRLICA--GFGIGCLPIHLVRRDVEQGL-LWRLP-----PEDGVVDFDIQLLWNR 293 >UniRef50_P25544 RuBisCO operon transcriptional regulator n=13 Tax=Proteobacteria RepID=RBCR_CHRVI Length = 302 Score = 130 bits (328), Expect = 7e-29, Method: Composition-based stats. Identities = 46/317 (14%), Positives = 97/317 (30%), Gaps = 26/317 (8%) Query: 7 TLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTP 66 + L L + + + S T+AA+ ++++ AVS + +L LF + T Sbjct: 2 HVSLRQLRVFEAVARHNSYTRAAEELHLSQPAVSMQVRQLEDEIGLSLFERLGKQVVLTE 61 Query: 67 LMVSMEQN---LAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRY 123 + + + ++ +L+ +A S + L QR+ Sbjct: 62 AGREVFHYSRAIGQSLREMEEVLESLKG--VSRGSLRIAVASTV-NYFAPRLMAIFQQRH 118 Query: 124 PQATIKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCV 182 ++L + +SL + VD+ G ++ E + V Sbjct: 119 SGIGLRLDVTNRESLVQMLDSNSVDLVLMGVPPRNV----------EVEAEAFMDNPLVV 168 Query: 183 WLRKDHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQS 241 DHP + +L + A++ E G+ M + E Sbjct: 169 IAPPDHPLAGERAISLARLAEETFVMREEGSGTRQAMERFFSERGQTIRHGMQMTRNEAV 228 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 L + + LV L + +++ L++ + + Sbjct: 229 KQAVRSGLGLSVVSLHTIELELETR---RLVTLDVEGFPDRRQW-----YLVYRRGKRLS 280 Query: 302 PKIVWLRETIKNLYASM 318 P RE + + A M Sbjct: 281 PAAGAFREFVLSEAARM 297 >UniRef50_Q7W2V9 Putative LysR-family transcriptional regulator n=2 Tax=Bordetella RepID=Q7W2V9_BORPA Length = 307 Score = 130 bits (328), Expect = 7e-29, Method: Composition-based stats. Identities = 38/271 (14%), Positives = 88/271 (32%), Gaps = 15/271 (5%) Query: 6 TTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPT 65 +DL L + + S ++AA ++ +T +S+ ++ L L + G+ PT Sbjct: 9 RAMDLQQLNYFVHVGEAGSFSRAAAKLGLTQPTLSRQVSLLEEDLAQRLLERTGRGVIPT 68 Query: 66 PLMVSMEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQIYQRYP 124 +++ N + ++ D+ + L + + L + +++P Sbjct: 69 AAGLALMPNARALLDLARRTRDELRDLQASPTGRVTLGLPPRIARWLTVPLVRAFREQFP 128 Query: 125 QATIKLRN-WDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVW 183 +A++ ++ + + G +D + E L + + Sbjct: 129 RASLSIQEGLSIHLREWLLDGRLDAALLFDP----------QASPQLACETLRQETLLLV 178 Query: 184 LRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 D P L +L T P I + LD VL+ G + + + + Sbjct: 179 GPVDAPPLPAYVDLSTLAELPLIMPAEPNALRVLLDAVLRPHGLALHPVVEVGAAQTLIP 238 Query: 244 MAAQPDNLLLATAPRYC-QYYNQLHQLPLVA 273 + Q + P Y + + Sbjct: 239 LVVQ--GMGYTVLPEGAVAAYACRSDIQIAP 267 >UniRef50_Q160L3 Transcriptional regulator, LysR family, putative n=4 Tax=Rhodobacteraceae RepID=Q160L3_ROSDO Length = 311 Score = 130 bits (328), Expect = 7e-29, Method: Composition-based stats. Identities = 49/274 (17%), Positives = 95/274 (34%), Gaps = 15/274 (5%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSP-LGLS 63 + L L + + S+ AA ++NV+ ++S ++ +L F PLFV GLS Sbjct: 1 MLRFTLRQLEYFVAVGEMGSIALAADKVNVSSPSISAAINQLEKEFGLPLFVRQHAQGLS 60 Query: 64 PTPLMVSMEQNLAEWMQMSNLLLDKPHHQTP-RGLKFELAAESPLMMIMLNALSKQIYQR 122 PT M + +Q + L+D + + +++ AL +R Sbjct: 61 PTLAGREMLKQAKLVLQNAEGLIDLAADISGNVQGPLSIGGLLTFAQVVVPALRASFERR 120 Query: 123 YPQATIKLRNWD-YDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPC 181 YP + D + R E+D+ + LP + ++ + + P Sbjct: 121 YPDVRVTQHELDQAQIFSMLRRSEIDVALTYDL----------DLPSDLKFQPIATLPPY 170 Query: 182 VWLRKDHPALHQ-TWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQ 240 L DHP + ++ L +P + + S + L + + G + IA + Sbjct: 171 AILCDDHPLAGRARVSVADLLEFPMVLLDLPFSSEYFL-SFFEATGLKPQIAERTRDMAV 229 Query: 241 SLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVAL 274 + A + L + L Sbjct: 230 MRSLVANGFGFSIVNVRPLNDRSPDGKPLRFIPL 263 >UniRef50_Q2NZJ9 Transcriptional regulator n=9 Tax=Xanthomonas RepID=Q2NZJ9_XANOM Length = 333 Score = 130 bits (328), Expect = 7e-29, Method: Composition-based stats. Identities = 40/263 (15%), Positives = 92/263 (34%), Gaps = 11/263 (4%) Query: 6 TTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPT 65 + + L ++ L +++S+ +A++ +NVT A++++L ++ PLF G+ P Sbjct: 10 HRIKVRHLRVIEALDRQKSLLRASRVLNVTQPALTRALQEIEEIVGAPLFERHSRGVRPN 69 Query: 66 PLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGL-KFELAAESPLMMIMLNALSKQIYQRYP 124 + + Q + D + A +L A+ +Y+ P Sbjct: 70 AMGEVLVQTAHVVLGQLRRAQDNFEGLLQDDALTITVGALPVAASGLLPAVLAALYRTEP 129 Query: 125 QATIKLRN-WDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVW 183 ++L + + L + E+D+ R L+ +VL+ D + Sbjct: 130 TLRVRLLHGRTDELLPKLAGNEIDLVVGRLYPLARYDALI--------RKVLYQDPIALV 181 Query: 184 LRKDHPA-LHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 R DHP + + Y + Q + V++E G + + Sbjct: 182 ARSDHPLFANGPVRIAEAAAYRQVLPTLSQHVERDVAQVMREHGLATRDQLRSSSASFTR 241 Query: 243 FMAAQPDNLLLATAPRYCQYYNQ 265 + D++ + + + Sbjct: 242 EILLGTDSIAVMPSMMVAGDIAR 264 >UniRef50_A7ZAT2 Putative HTH-type transcriptional regulator n=2 Tax=Bacteria RepID=A7ZAT2_BACA2 Length = 302 Score = 130 bits (327), Expect = 7e-29, Method: Composition-based stats. Identities = 34/241 (14%), Positives = 82/241 (34%), Gaps = 13/241 (5%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +D+ + + + S TKA++ ++++ A+SK + L L S ++ T Sbjct: 1 MDIRQITYFLEVAKSNSFTKASENLHLSQPALSKMVKSLEEELKVELIDRSARQIALTDA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + M+ + L + K ++ + ++ + + Q YP Sbjct: 61 GEIVFEQGQMIMKSIDDLSTNLYDLLHLKKGKVKIGIPPLIGVLFFPKIIRGFKQLYPDV 120 Query: 127 TIKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 IKL + + + G +D+G +++ L ++ +++ Sbjct: 121 NIKLIEHGGNKVKQEVEDGVLDLGVVIEPVDEEQFDIIP----------LLNEELMLFVH 170 Query: 186 KDHPALHQTW-NLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 HP +H+ + P I + S + G I +++ M Sbjct: 171 SAHPLVHKEIVEMQDLKNEPFILFSEDFSLHDRIIQECIRAGFRPNIVYESSQWDFISEM 230 Query: 245 A 245 Sbjct: 231 I 231 >UniRef50_D1WWA8 Transcriptional regulator, LysR family n=7 Tax=Streptomyces RepID=D1WWA8_9ACTO Length = 310 Score = 130 bits (327), Expect = 8e-29, Method: Composition-based stats. Identities = 42/276 (15%), Positives = 92/276 (33%), Gaps = 18/276 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L + +E +AA+R+ + +S+ + +L LF + + T Sbjct: 1 MELRHLRAFLAVAEELHFGRAARRLQMAQPPLSQRIRQLEKELGVQLFHRNTRSVRLTGA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + + + + + + L L++ + +P Sbjct: 61 GETFLDPVRTVLDDLDTAVRAARSAGRGEYGRVTIGFAGASSHETLPRLTRAVRAAHPGL 120 Query: 127 TIKLRNWDYD--SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 + + Y +L + G +D+GF L +++ V+ + L Sbjct: 121 ELVMTGQTYANVALSRVADGSLDLGF----------VRLPVSRPGVEHRVIDEEELLCAL 170 Query: 185 RKDHPALH-QTWNLDTFLRYPHISI--CWEQSDTWALDNVLQELGRERTIAMSLP-EFEQ 240 DHP + +L P +S + AL + G + P + Sbjct: 171 PSDHPLARHEAVSLADLADEPFVSFPANTGSTVRDALTEACESAGFTPRVVQEAPDSYTI 230 Query: 241 SLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPL 276 +AA L T+ R+ Q +++ PL P+ Sbjct: 231 MALVAAGVGVTLTVTSVRHIQQSGLVYR-PLTGPPI 265 >UniRef50_Q7W6T4 Putative lysR-family transcriptional regulator n=3 Tax=Bordetella RepID=Q7W6T4_BORPA Length = 301 Score = 130 bits (327), Expect = 8e-29, Method: Composition-based stats. Identities = 41/294 (13%), Positives = 95/294 (32%), Gaps = 18/294 (6%) Query: 1 MKKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPL 60 M +I ++ L L L + S T AA+++ ++ +VS + +L A L V Sbjct: 1 MMDAIESVSLRQLRALVSIGDTASFTGAAEQLGMSQPSVSHLIRRLEAEVGQTLVVR-GR 59 Query: 61 GLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQI 119 ++ T ++ + + + + Q+ +A +L + Sbjct: 60 EVTLTRQGQALADIARRAILSIDGAVRESRDQSALKSGSVSVAVGHVSAATLLPRILVAF 119 Query: 120 YQRYPQATIKLRN-WDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSD 178 QR+P + + + + + E D+G ++ S + E+L+ Sbjct: 120 NQRHPNIELIVVDCVVEQIRNKLLSHEADVGLGA---------VVGSDDSRLSTELLWDG 170 Query: 179 VPCVWLRKDHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPE 237 +++R DH + + P I + + +L G + + Sbjct: 171 GVSLFMRDDHYLADREAIDAAILAELPCIQLNPNAPPWLVISRLLVANGIHPRVDQRVVL 230 Query: 238 FEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFT 291 ++ M + +A P + A+P+ V + Sbjct: 231 VSTAVGMIQA--GMGVAMLPHAAAAQAPR---GVRAVPIRNPFLSWPISLVRLS 279 >UniRef50_A5G0H6 Transcriptional regulator, LysR family n=1 Tax=Acidiphilium cryptum JF-5 RepID=A5G0H6_ACICJ Length = 303 Score = 130 bits (327), Expect = 8e-29, Method: Composition-based stats. Identities = 43/280 (15%), Positives = 80/280 (28%), Gaps = 16/280 (5%) Query: 10 LNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMV 69 L+ L + + VT+AA+ + +T SA S ++A L F LF G++ T Sbjct: 3 LDQLRIFIAVAEREHVTRAAEALGLTQSAASGAVAALEREFGTRLFHRVGRGIALTEAGR 62 Query: 70 SMEQNLAEWMQMSNL-LLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQATI 128 + + L + + A + L Q YP + Sbjct: 63 VFFTEARAILNRTEQAALTMREIAGLARGRLAIKASQTIANHFLPLRLVAFRQAYPGIGL 122 Query: 129 KL-RNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKD 187 + + AI G+V++GF + + + E + D + + Sbjct: 123 AVSIGNSAEVARAILEGDVELGFVEGPGD-------TLIQPRLAAEPIAQDRLVMVVAPG 175 Query: 188 HPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRER---TIAMSLPEFEQSLF 243 HP + + L L LG + +A+ LP L Sbjct: 176 HPWAKRRALRPAELASGSWVLREDGSGTRAVLFEALAGLGIDHAAVDVAIELPANNSVLT 235 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQ 283 + +V +P+ Sbjct: 236 AVSG--GAGATILSELVCADALAAG-KVVEVPVKLPRRTY 272 >UniRef50_A4TSA2 Transcriptional regulator n=23 Tax=Enterobacteriaceae RepID=A4TSA2_YERPP Length = 411 Score = 130 bits (327), Expect = 8e-29, Method: Composition-based stats. Identities = 43/308 (13%), Positives = 103/308 (33%), Gaps = 19/308 (6%) Query: 13 LLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSME 72 L L +++ A+ +++T SAVS +L L LF +P G+ PTP + Sbjct: 116 LQIFLSLYRQQHALHVAQALDITQSAVSAALKVLEKGAGMYLFHRTPKGMLPTPAGHEIA 175 Query: 73 QNLAEWMQMSNLLLDK-PHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQATIKLR 131 ++ + + + ++ H+ + A +L ++ R+P I Sbjct: 176 PCISRALNALHHIPEEITAHRGDLTGSVRVGALPLSRARLLPQAMIKLISRHPGIKIVTN 235 Query: 132 NWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPA 190 + +L + G++D + I E+LF + + R +HP Sbjct: 236 ESGFTALIAELRAGDIDFIIGALRNEKMLL--------DIHSEILFEEELILLARPNHPL 287 Query: 191 LHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGR-ERTIAMSLPEFEQSLFMAAQPD 249 + + L+ ++G + + + D Sbjct: 288 SDRRVKNQELKDIQWVLPRNHAPSRHLLEVAFCKMGLASPQPVVESGDPAVVRALLLGSD 347 Query: 250 NLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWLRE 309 ++A + + + + PL + + ++ L+ ++ ++P L Sbjct: 348 --MVAAVSSHQLDFEVSEGILI---PLQVNLTGTRR---EIGLMTRQKALNSPATDALIN 399 Query: 310 TIKNLYAS 317 ++ + S Sbjct: 400 CVREVIQS 407 Score = 53.9 bits (129), Expect = 8e-06, Method: Composition-based stats. Identities = 14/81 (17%), Positives = 31/81 (38%) Query: 2 KKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLG 61 K ++ + + + ++ + + AA + T SA+++S+ L LF G Sbjct: 4 KNDRNSIKIMQIRAFCMTAEQGAASLAALNLFRTQSAITRSIRDLEHTLAISLFERHAKG 63 Query: 62 LSPTPLMVSMEQNLAEWMQMS 82 + T L + M+ Sbjct: 64 MLLTDLGNVILPRARSAMEEL 84 >UniRef50_Q7WLJ5 LysR-family transcriptional regulator n=3 Tax=Bordetella RepID=Q7WLJ5_BORBR Length = 317 Score = 130 bits (327), Expect = 8e-29, Method: Composition-based stats. Identities = 43/270 (15%), Positives = 79/270 (29%), Gaps = 13/270 (4%) Query: 12 LLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSM 71 L +M SV++AA+ + +T SA SK L +L LF L PTP + Sbjct: 21 QLGVFHAIMITGSVSRAARLMGMTQSAASKMLRQLEDDTGLRLFERQHQRLVPTPHAQGL 80 Query: 72 EQNLAEWMQMSNLLLDKPHHQ-TPRGLKFELAAESPLMMIMLNALSKQIYQRYPQATIKL 130 + ++ + ++ + P +AA L K++ +RY T+ + Sbjct: 81 QDSVEQLYGAYGVVQRQIDSLADPDTGHVNVAAIPTQATTFLPQAIKRLRERYQGITVTV 140 Query: 131 RNWDYDS-LDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHP 189 +D + G+ D G + S E L H Sbjct: 141 EILANQPIVDRVQSGQADFGLVHDITPSVSTLN----------EDLGLQHVVCVAPAGHR 190 Query: 190 ALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQP 248 +S + + L+ G +A+ + L + Sbjct: 191 YAGLPHVAAHDLRNETFLSYGPQTNFGAMLETAFASAGVRMPVAVEVTSSAALLALIRAG 250 Query: 249 DNLLLATAPRYCQYYNQLHQLPLVALPLPF 278 + L + + LP Sbjct: 251 VGVGLVEPAAIAPFGATGLVIKPFLPALPV 280 >UniRef50_Q5WBL7 LysR family transcriptional regulator n=3 Tax=Bacillus RepID=Q5WBL7_BACSK Length = 299 Score = 130 bits (327), Expect = 8e-29, Method: Composition-based stats. Identities = 39/243 (16%), Positives = 78/243 (32%), Gaps = 17/243 (6%) Query: 10 LNL--LLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +NL L +++ S+TKAA+ ++++ AVS L A + PL G+ PTP Sbjct: 1 MNLHGLRLFYTVVRTGSITKAAQALHISQPAVSSQLKAFEAELNIPLLQKDGRGIVPTPF 60 Query: 68 MVSMEQNLAEWMQ---MSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYP 124 + + +AA +L L+ +YP Sbjct: 61 GKQLADKAETLFSVETHIEAFAQQFR--DVGAGHIHVAATYLPANFLLPQLAGAFKAQYP 118 Query: 125 QATIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVW 183 +++ + + + + R + DI + ++ D Sbjct: 119 TIDLQIETVNSQQAFEKLARYKADIAI--------YAGTIDKCAKDFVWDEWLEDELWFV 170 Query: 184 LRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQE-LGRERTIAMSLPEFEQSL 242 H ++ +L + P + S L + Q + TIA+ ++L Sbjct: 171 AAPSHRLANERVSLAEVVIEPFVMREEGSSTRAQLFTLCQANHLKPPTIALQFSGLNEAL 230 Query: 243 FMA 245 Sbjct: 231 SAV 233 >UniRef50_Q8TVB0 Transcriptional regulator of the LysR family n=1 Tax=Methanopyrus kandleri RepID=Q8TVB0_METKA Length = 304 Score = 130 bits (327), Expect = 9e-29, Method: Composition-based stats. Identities = 42/264 (15%), Positives = 96/264 (36%), Gaps = 18/264 (6%) Query: 13 LLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSME 72 + +++++S +KAA+ + +T VS +A L +FD LFV +P G+ T Sbjct: 9 FRTFREVVRQKSFSKAAEALGITQGTVSNQIASLERFFDARLFVRTPEGVELTEEGEIAL 68 Query: 73 QNLAEWMQMSNLLLDKPHHQ--TPRGLKFELAAESPLMMIMLNALSKQIYQRYPQATIKL 130 + + + DK P K ++ + +L K+ YP+ + + Sbjct: 69 EAIETVLDAVERAKDKIAAVSKEPS-GKVRVSTSTVPGGYLLPGSVKEFRSEYPKVDVII 127 Query: 131 RN-WDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHP 189 R ++ + + G+ D+ G ++ +++ + S+ V L DH Sbjct: 128 RVCDSREATEHVLSGDADVAIVGTDAFVTR--------KSVEVVPIASEELVVILPPDHE 179 Query: 190 ALHQ-TWNLDTFLRYPHISICWEQSDTWALDNVLQELGR---ERTIAMSLPEFEQSLFMA 245 ++D + P+++ ++ L+ G + I + E + Sbjct: 180 LADAMEVSIDDIVGEPYVNRESGSGTRREVEKYLKSHGLGFEDFKIVEEVGSTEAVITSV 239 Query: 246 AQPDNLLLATAPRYCQYYNQLHQL 269 +Q ++ + L Sbjct: 240 SQ--GAGISIISERAAKRAESAGL 261 >UniRef50_O33945 Probable cat1 operon transcriptional activator n=9 Tax=Proteobacteria RepID=CATR_ACILW Length = 303 Score = 130 bits (327), Expect = 9e-29, Method: Composition-based stats. Identities = 47/317 (14%), Positives = 103/317 (32%), Gaps = 30/317 (9%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +DL + +ER+ T+AA+++N+ +S+ + L PL + + + T Sbjct: 1 MDLRQFRYFVAVARERNFTRAARQLNIAQPPLSRQIQLLEEEVGVPLLIRNSRPVQLTDA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKF-ELAAESPLMMIMLNALSKQIYQRYPQA 126 + + + + + + + +L L +++ Q P+ Sbjct: 61 GRLFFEQAIQVLGRVEQMQAATRRVGLHQRSVLSIGFVASTLYGVLPTLMRKLRQHAPEL 120 Query: 127 TIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 I++ + AI G +DIGF + + VL + V L Sbjct: 121 DIQMVELMSVQQIQAINEGRIDIGFGR----------VHHSDPNVSSIVLHEERLAVALP 170 Query: 186 KDHPALHQ--TWNLDTFLRYPHISICWEQSDTWALDNVLQ---ELGRERTIAMSLPEFEQ 240 + P + + I + ++ D VL + M + E + Sbjct: 171 MESPMARESTPLPVHQLAGEKLI-VYPKEPRPGFADQVLNILDRHDVQPGQVMEVREIQT 229 Query: 241 SLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 +L + A + P + L+ + V + H+ N Sbjct: 230 ALGLVAA--EFGVCVIPASARQMRHDVHYRLID-------GDRATSPVIVS---HRANDS 277 Query: 301 NPKIVWLRETIKNLYAS 317 + I ++ I+ +YA Sbjct: 278 SKYISLTKQLIREMYAE 294 >UniRef50_A0R3Z8 Transcriptional regulator, LysR family protein n=1 Tax=Mycobacterium smegmatis str. MC2 155 RepID=A0R3Z8_MYCS2 Length = 289 Score = 130 bits (327), Expect = 9e-29, Method: Composition-based stats. Identities = 35/300 (11%), Positives = 90/300 (30%), Gaps = 27/300 (9%) Query: 10 LNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMV 69 + L C +L +E +AA+R++V A+S+ + ++ LF+ + +S T Sbjct: 1 MRHLRCFVVLAEELHFGRAAQRLHVAQPALSQLIQRVERELGAQLFLRTRRTVSLTEAGQ 60 Query: 70 SMEQNLAEWMQMSNLLLDKPHHQ-TPRGLKFELAAESPLMMIMLNALSKQIYQRYPQATI 128 ++ ++ ++ + + +L L + +P +I Sbjct: 61 TLLPEARRILRDADRVTQAVRAVHRGETGSVTIGFVGSAADDVLPRLVAAHRRHHPGVSI 120 Query: 129 KLRN-WDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKD 187 +L L+ + + +G A+ VL + + + Sbjct: 121 RLEEGTTAQQLEWLRDQRITVGLGRTPID----------DPAVSTVVLARESLVLAVPDS 170 Query: 188 HPALH-QTWNLDTFLRYPHISI--CWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 H ++ L P I + + G ++ + + + Sbjct: 171 HALSGAESAELAGLAEEPFIMFPRHLGPGLYDIIHSACAAAGFTPSVVYETVRMQTIVGL 230 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 + L +A P + + + + + +++W RN Sbjct: 231 VSG--GLGVALVPESVRNLGRKG--------VRYVHLADAPPAIELSMMW--RNDCESPH 278 >UniRef50_B7AVQ3 Putative uncharacterized protein n=1 Tax=Bacteroides pectinophilus ATCC 43243 RepID=B7AVQ3_9BACE Length = 290 Score = 130 bits (327), Expect = 9e-29, Method: Composition-based stats. Identities = 42/297 (14%), Positives = 91/297 (30%), Gaps = 33/297 (11%) Query: 10 LNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMV 69 L L + + S+T AA R+NVT +VS ++ +L A++ LF + T Sbjct: 3 LRHLQIFRAVCDCGSITAAADRLNVTQPSVSMAIRELEAFYQTRLFDRINRKIYLTEAGT 62 Query: 70 SMEQNLAEWMQMSNL---LLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + Q + + LL + T + + +L + ++ R P Sbjct: 63 MLRQYTDTMLDQYDDMTILLREGKVFTKC----RIGVNISVAETLLPDVIRKARARIPDI 118 Query: 127 TIKLRNWDYDSLDA-ITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + + + ++++ + ++D SR + +D + Sbjct: 119 NLNVLVHNTETIEQKLADNQIDFAILDNVKDSASRN----------SRIFDTDDMVIVCS 168 Query: 186 KDHPAL--HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 P + + + P + ++ V G I M Sbjct: 169 ---PYVYYKDSMTIGELAEKPLLLREEGSGLRSCVEGVFARHGYGMNIIMESTSTLALAE 225 Query: 244 MAAQPDNLLLATAP-RYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 +A L P + + L V L + + L+++K+ Sbjct: 226 LADG--GLGFTVLPLSIVKKLEKTLCLKTVKL-------EDDIFRRSYYLVYNKKKH 273 >UniRef50_B7RZD5 LysR substrate binding domain protein n=1 Tax=marine gamma proteobacterium HTCC2148 RepID=B7RZD5_9GAMM Length = 300 Score = 130 bits (327), Expect = 9e-29, Method: Composition-based stats. Identities = 39/280 (13%), Positives = 87/280 (31%), Gaps = 20/280 (7%) Query: 6 TTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPT 65 + +DL L + Q + A+++++ AVS ++ KL LF S ++ T Sbjct: 11 SGVDLRKLEIFAAVAQSGGFSAGAEQLHMAQPAVSIAVRKLEDSLGVTLFDRSSRSIALT 70 Query: 66 PLMVSMEQNLAEWMQMSNLLLDKPHHQ-TPRGLKFELAAESPLMMIMLNALSKQIYQRYP 124 + +Q L + ++ S L L L + Sbjct: 71 AEGEQLLGRAQSILQQVQDLAQSAGDLSDLLRGELSISCPSMLATYFLPDLLSGFLTEHS 130 Query: 125 QATIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVW 183 T + + + R ++++G + ++ L + V Sbjct: 131 GLTASVTQAGTTQIEEMLLRDDIELGVTTTSGT-----------EDLERLPLIKEQMVVC 179 Query: 184 LRKDHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 + ++HP ++ N P + LD + +E E + + + Sbjct: 180 VAENHPWAQRSHLNTQELHNTPMVVYESGYFIRAQLDQLCREAAVEPELRLQSNFLPLLV 239 Query: 243 FMAAQPDNLLLAT-APRYCQYYNQLHQLPL---VALPLPF 278 M Q + + + + +PL V +P+ Sbjct: 240 RMVKQ--GIGVTVGLRTMAEQEPGIAGIPLTPGVEVPMAL 277 >UniRef50_B8GVI8 Transcriptional regulator, LysR family n=2 Tax=Caulobacter vibrioides RepID=B8GVI8_CAUCN Length = 298 Score = 130 bits (327), Expect = 9e-29, Method: Composition-based stats. Identities = 48/273 (17%), Positives = 88/273 (32%), Gaps = 19/273 (6%) Query: 7 TLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTP 66 L+L L + M S T AA R+ +T AVS+ +A+L LF LSPTP Sbjct: 2 KLNLRSLEAFRETMLSGSATAAAGRMGLTQPAVSRLIAQLEQEVGFELFYRERGRLSPTP 61 Query: 67 LMVSMEQNLAEW---MQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRY 123 + + + ++ + L ++ A L +L+ + + R+ Sbjct: 62 EALIIYDEIDLAFGGLERVDALARDIAAFN--TGLLKIVAPPSLSESVLSTILPRFMARF 119 Query: 124 PQATIKLRNWDYDSLDAI-TRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCV 182 P+ I + + + A+ VD GF I L + Sbjct: 120 PKVRIAIESRSTATARAMVANRTVDCGFVKLPLDRS----------DISTVTLSTSETVC 169 Query: 183 WLRKDHPA-LHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQS 241 L HP H+ + P + + +D+ +E G + + + Sbjct: 170 VLPDTHPLTAHEVLTPELLRGEPLVLLGAGTWTRRQIDDAFRERGVRPDVRVETHTVGSA 229 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVAL 274 +AA L +A + + Sbjct: 230 CALAAG--GLGVAIVNALLADNFARPGVAIRVF 260 >UniRef50_Q7WNE4 LysR-family transcriptional regulator n=1 Tax=Bordetella bronchiseptica RepID=Q7WNE4_BORBR Length = 293 Score = 130 bits (327), Expect = 9e-29, Method: Composition-based stats. Identities = 36/273 (13%), Positives = 87/273 (31%), Gaps = 17/273 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +DL L L +E +AA R++++ +S ++ L LF + ++ T Sbjct: 1 MDLRQLKYFVALAEELHFRRAAARLSISQPPLSHAIKLLEEELGTALFERTTKSVALTSA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRGL-KFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + + + + +++ L + + QR P+ Sbjct: 61 GQAFYPEALKVLAQLQVACAVTREVGAGKRGHLRIGFVGGMLLRGLPEIVRDYAQRNPEV 120 Query: 127 TIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + L + AI RG++ L ++ +V+ + + Sbjct: 121 IVTLHETSSAEQAKAIARGQL----------SAGFLHAGLLAPELEGQVIRDEPFVACVP 170 Query: 186 KDHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQ---ELGRERTIAMSLPEFEQS 241 +DH + ++ + D+V+ + G I + + + Sbjct: 171 RDHRLAGRRVIDVRQLAGEDMVLF-ARDVSPGYYDSVIALCMDAGFSPRIRHEVAHWLTA 229 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVAL 274 L + ++ + L P + + L L A Sbjct: 230 LLLISRGGGVALVPDPFVDAGLDGVRYLRLKAC 262 >UniRef50_Q21IY2 Transcriptional regulator, LysR family n=2 Tax=Gammaproteobacteria RepID=Q21IY2_SACD2 Length = 299 Score = 129 bits (326), Expect = 1e-28, Method: Composition-based stats. Identities = 40/244 (16%), Positives = 85/244 (34%), Gaps = 12/244 (4%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 IT++D + L + + S + AA+ + +T AVSK +A L + LF ++ Sbjct: 2 ITSMDTDGLKAFLAVAEHHSFSVAAQHLFITQPAVSKRIAALEQELNHILFDRLGRDVAL 61 Query: 65 TPLMVSMEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQIYQRY 123 T ++ + + + +A + + L + ++ + Sbjct: 62 TEAGQALLPRAQAILNSMHEAQRTIREFSGEIVGTLRVATSHHIGLHHLPPILREFAANH 121 Query: 124 PQATIKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCV 182 Q ++ D + + + RG+ D+ L +L ++ VL+ D C Sbjct: 122 KQVNLQFDFLDSEQAHEKVLRGDCDLAV---------VTLAPTLEENLEASVLWPDPLCF 172 Query: 183 WLRKDHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQS 241 + +HP + +L+ R P I + + G + M+ E Sbjct: 173 IVGANHPLATSKNISLEELSRTPAILPDLNTYTGRLVKHFFDTQGLALNLNMATNYLETI 232 Query: 242 LFMA 245 M Sbjct: 233 KMMV 236 >UniRef50_P73123 Probable RuBisCO transcriptional regulator n=81 Tax=cellular organisms RepID=RBCR_SYNY3 Length = 345 Score = 129 bits (326), Expect = 1e-28, Method: Composition-based stats. Identities = 49/243 (20%), Positives = 83/243 (34%), Gaps = 13/243 (5%) Query: 10 LNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMV 69 L+ L L+ + E S +AA + V+ AVS + L PLF T Sbjct: 8 LDQLRILKAIASEGSFKRAADTLYVSQPAVSLQVQNLEKQLSVPLFDRGGRKAQLTEAGH 67 Query: 70 SMEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNALSKQIYQRYPQATI 128 + + + + + A +L + Q+YP T+ Sbjct: 68 LLLNYGEKIITLCQETCRAIEDLQNLQGGTLIVGASQTTGTYLLPRMIGMFRQQYPDVTV 127 Query: 129 KL-RNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKD 187 +L + + + G+VD+ G E +E L+ LP A D + L Sbjct: 128 QLQVHSTRRTAWGVANGQVDLAIIGGEVPAELQETLTVLPYA-------EDELALILPVL 180 Query: 188 HPALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQ--ELGRER-TIAMSLPEFEQSLF 243 HP +T + + IS+ + + +D VL E+ +R I M L E Sbjct: 181 HPLAQAETIQKEDLYKLKFISLDSQSTIRKVIDKVLSQGEIDTKRLKIEMELNSIEAIKN 240 Query: 244 MAA 246 Sbjct: 241 AVQ 243 >UniRef50_Q6W1G3 Putative transcriptional regulator LysR n=1 Tax=Rhizobium sp. NGR234 RepID=Q6W1G3_RHISN Length = 308 Score = 129 bits (326), Expect = 1e-28, Method: Composition-based stats. Identities = 49/271 (18%), Positives = 87/271 (32%), Gaps = 6/271 (2%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +DL L + +E +VT+A++++++T A+S+ L +L + LF + GL T Sbjct: 5 IDLKTLRAFVAVAREGNVTRASEQLHLTQPALSQHLKRLASDTGVTLFRRTSKGLELTHQ 64 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRGL-KFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + H + K + L K + P Sbjct: 65 GALLAAKAEQVFAALQDFGQTARHLGAQVRGKLRIGTIIDPEFTRLGGFLKALVDSGPGI 124 Query: 127 TIKLRN-WDYDSLDAITRGEVDIGF---SGRESHPRSRELLSSLPLAIDYEVLFSDVPCV 182 +LR+ D + + R E+D+GF R+ P + L V Sbjct: 125 ETELRHGMSGDVPEGLRRNELDVGFFLGDIRDFDPVASATADGSDSLFHVRELARLTYRV 184 Query: 183 WLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 A + + P I L V +LG + I S+ + L Sbjct: 185 VAPPSLAAFVRGQDWVALAALPWIGTPHASVHNRLLSEVFGKLGVRQNIVASVDQEPSML 244 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVA 273 M + L + Q H L + Sbjct: 245 AMV-RTGLGLSLCRESLALHEQQAHGLVIAD 274 >UniRef50_C3LMU4 Transcriptional regulator, LysR family n=65 Tax=Gammaproteobacteria RepID=C3LMU4_VIBCM Length = 296 Score = 129 bits (326), Expect = 1e-28, Method: Composition-based stats. Identities = 42/292 (14%), Positives = 87/292 (29%), Gaps = 25/292 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +++ L + + S T AA+++++ A+S S+ K LF ++ T Sbjct: 8 MEVRQLRHFVTVAEWESFTLAAQQLHIAQPALSISIKKFEQQLGVTLFKRDERKVALTHE 67 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTP-RGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + ++ +Q N + L A S + + +P Sbjct: 68 GEVLLEHAKRILQQVNDAQLAVDELKGVVKGEVRLGAPSMMGSYFFPQIIMAFKSHFPNL 127 Query: 127 TIKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + + S+ + GE+DIG L LP + + L S + Sbjct: 128 KMTVIEAGTQSIRRMLLSGELDIGV----------ILNHDLPDDLAADPLLSSQMVAVVG 177 Query: 186 KDHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 K+H + F + + +D V +E + L + Sbjct: 178 KNHELAERRHLTFAEFFEHELVMFKPGYFHRDFIDKVCREHKFTADFSFETNLLPMILSI 237 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHK 296 + + A ++ + A+P + L W K Sbjct: 238 VKH-EYAITALLE-----LVTSNEPEVKAIPFEPPVW------LDLALAWRK 277 >UniRef50_D1PWM9 HTH_1 family transcriptional regulator n=4 Tax=Prevotella RepID=D1PWM9_9BACT Length = 306 Score = 129 bits (326), Expect = 1e-28, Method: Composition-based stats. Identities = 42/295 (14%), Positives = 103/295 (34%), Gaps = 20/295 (6%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 ++ T++L + L + + ++A+K + +T S +S+ + +L FD LF + G+ Sbjct: 1 MTVVTMELRQIRYFLKLAELLNFSEASKALFITQSTLSQQIRQLEQEFDTVLFDRNSHGV 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQ-TPRGLKFELAAESPLMMIMLNALSKQIYQ 121 S T + + + + ++ + K + + ++ + + + Sbjct: 61 SLTEAGMQLRRYARCVVNEADACVQKMEDLKNMLAGELNIGVTFSFSPLLTETVLE-FMK 119 Query: 122 RYPQATIKLRNWD-YDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 RYP + + + +D + + EVD + + + + I+ VLF + Sbjct: 120 RYPNVRLNVYYKTMGELMDMLQQREVDFVLAFKP---------TVMNDKIESHVLFGNRL 170 Query: 181 CVWLRKDHPALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFE 239 V + HP ++ D + Y D + G + + L + Sbjct: 171 SVVVSDTHPLAKRKSITTDDLMMYDLALPARGLQARNTFDETIGMAGH-PKVRIELNDVS 229 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLW 294 L + Q + + + + LVA+P+ + + Sbjct: 230 ILLKLVRQSKLITV------LAEASIHDEDGLVAIPIQIANDGMEGCIHQLRQAY 278 >UniRef50_D2QVQ4 Transcriptional regulator, LysR family n=22 Tax=Bacteroidetes RepID=D2QVQ4_9SPHI Length = 298 Score = 129 bits (326), Expect = 1e-28, Method: Composition-based stats. Identities = 39/229 (17%), Positives = 79/229 (34%), Gaps = 24/229 (10%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 D L + + S TKAA + VT A++K + +L + LF +S T Sbjct: 2 FDFR-LTVFYTVARRLSFTKAAAELFVTQPAITKHIQELESQLGTALFDRRGNQISLTTA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRG------LKFELAAESPLMMIMLNALSKQIYQ 121 + ++ M + + + L A S + ++ A+ + + Sbjct: 61 GNVLLRHAETIMGVYRQI-----EFDLNELKGKPGGRLRLGASSTIAQYVIPAVLARFGE 115 Query: 122 RYPQATIKLRNWDYDSLDA-ITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 ++P T+ L + + + ++ + E+D+G +H + Y D Sbjct: 116 QFPDVTLSLLSGNTEQIEQALLHDEIDLGLVEGRTHHS----------DVRYTPFVKDEL 165 Query: 181 CVWLRKDHPALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRE 228 + R DHP LD P + +++ L+ G Sbjct: 166 VLVCRADHPLAGRDEITLDELKTVPLVLREPGSGSREVVEHALRGAGLR 214 >UniRef50_B1J1Q5 Transcriptional regulator, LysR family n=21 Tax=Proteobacteria RepID=B1J1Q5_PSEPW Length = 310 Score = 129 bits (326), Expect = 1e-28, Method: Composition-based stats. Identities = 48/319 (15%), Positives = 111/319 (34%), Gaps = 20/319 (6%) Query: 3 KSIT-TLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLG 61 ++ + LLC + ++ S+ +AA + ++ A+SK+L +L + LF S G Sbjct: 1 MNLDTRIKYRHLLCFLEIARQGSLARAADILAISQPAISKTLKELEDLLETRLFERSRQG 60 Query: 62 LSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQ 121 + TP +Q + + + + S + +++ + +++Q Sbjct: 61 VELTPAGTRFMHYAGPSVQALRDGVSSLRGEARAPSQVRIGVLSTVEGLLMPEVLCRLHQ 120 Query: 122 RYPQATIKLRN-WDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 R+ I + L + GE+++ P+ + + +E L+S+ Sbjct: 121 RHEALLISVVTGASAQLLGQLRLGELELVVGRMTDSPQIQ--------GLSFEHLYSESM 172 Query: 181 CVWLRKDHPALHQ-TWNLDTFLRYPHISICWEQSDTWALDNVLQELGRE-RTIAMSLPEF 238 + +R HP L + RYP + + D++ + G + + Sbjct: 173 ALVVRPGHPLLANMQVDRARVGRYPLVLPPPGTTIRQHADSLFVQCGIQLPAQRLETLSL 232 Query: 239 EQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRN 298 S D + +A PR + L L L E + + Sbjct: 233 ALSRRYLLGSDAVWVA--PRDAVLLDLRRG-ELAELDLGVREPGG-----SVGICRNAAL 284 Query: 299 SHNPKIVWLRETIKNLYAS 317 + + W+ + ++ + Sbjct: 285 ALSLPGQWVCDVLREVAGQ 303 >UniRef50_A8GER4 Transcriptional regulator, LysR family n=2 Tax=Serratia RepID=A8GER4_SERP5 Length = 328 Score = 129 bits (326), Expect = 1e-28, Method: Composition-based stats. Identities = 57/284 (20%), Positives = 100/284 (35%), Gaps = 19/284 (6%) Query: 1 MKKS---ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVN 57 MKK+ I + L + + QERS+++AA ++N++ A+SK+L++L A + L V Sbjct: 18 MKKANLFIQRMRLRHINGFVAVAQERSLSRAADKLNLSQPALSKTLSELEALTGNRLLVR 77 Query: 58 SPLGLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALS 116 + G T ++ + A + ML Sbjct: 78 NRQGTLLTEQGEQFLGYATRVLEALTAAGHALDRLDDAPARVLRIGALPTTALGMLPQSI 137 Query: 117 KQIYQRYPQATIKLRN-WDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVL 175 Q Q +P + I++ + + L + GE+D+ L L L Sbjct: 138 GQYQQAHPHSRIQVITGKNAELLAQLKAGEIDVAIGRMADPEMMSGLAFELLLLESLL-- 195 Query: 176 FSDVPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQS-DTWALDNVLQELGRERTIA-M 233 + R HP L +T L+ L YP I + + +++L G + Sbjct: 196 ------MVTRPGHPLLSETITLERALHYP-AIISPKGTVPRHNTESLLSTQGFSLPGQYI 248 Query: 234 SLPEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLP 277 + M Q D L + + L+ LPLP Sbjct: 249 ETLSASLARQMTLQFDYLWFVPSS---AVKADIAAGQLIPLPLP 289 >UniRef50_Q478C5 Transcriptional regulator, LysR family n=2 Tax=Betaproteobacteria RepID=Q478C5_DECAR Length = 327 Score = 129 bits (326), Expect = 1e-28, Method: Composition-based stats. Identities = 44/255 (17%), Positives = 86/255 (33%), Gaps = 15/255 (5%) Query: 7 TLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTP 66 DL L + + S+T+AA+++++ PS+ S L +L A PLF GL+PTP Sbjct: 29 RYDLPDLRLVAAIADSGSLTRAAEQVHLAPSSASHRLTQLEAALGIPLFARHARGLTPTP 88 Query: 67 LMVSMEQNLAEWMQMSNLLLDKPHHQTP-RGLKFELAAESPLMMIMLNALSKQIYQRYPQ 125 S+ ++ + + + + A + + L + +P Sbjct: 89 AGESLLRHARQVFAQLEQMHADLAPYASGLHSQVTVFANTNAINCFLPEDLGDFLREHPH 148 Query: 126 ATIKL-RNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 + L + A+ G+V+IG E ++ D + + Sbjct: 149 IRVSLEEQPSPAIIQAVAAGQVEIGVVASEGGL----------AGVETRPYRQDRLVLIV 198 Query: 185 RKDHPALHQ-TWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 H + L P + + + + N LG + + + F Sbjct: 199 APGHALAEKCELAFADVLAEPFVCLHAGSAIHTFMMNHAARLGGRLDVRIQVRSFNAVCR 258 Query: 244 MAAQPDNLLLATAPR 258 M A + + PR Sbjct: 259 MVAA--GVGIGMVPR 271 >UniRef50_Q1GJ71 Transcriptional regulator, LysR family n=1 Tax=Ruegeria sp. TM1040 RepID=Q1GJ71_SILST Length = 312 Score = 129 bits (326), Expect = 1e-28, Method: Composition-based stats. Identities = 42/300 (14%), Positives = 95/300 (31%), Gaps = 21/300 (7%) Query: 6 TTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPT 65 + + + CL ++ S+ AA+R+ +T A+S++L +L L + S G+ T Sbjct: 8 RQVKIRHMQCLLEVVSCGSLKGAAERLYLTQPAISRTLKELEDILGSTLLLRSRAGVELT 67 Query: 66 PLMVSMEQNLAEWMQMSNLLLD--KPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRY 123 + + L+ + + A + +L +++ + Sbjct: 68 EAGEVFAHFARMSLAALDHGLESLERTRGGALQQTVTIGALPSVAAGLLPRVAEGFQRLA 127 Query: 124 PQATIKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCV 182 P A + L + + +L D + G V + + + + ++++ Sbjct: 128 PGAVLHLSDGPHGALIDLLRGGAVSMVIGRLGDPASMQ--------GVSFTQVYTEEVVC 179 Query: 183 WLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 +R HP L LD R+P I + ++ L G + + Sbjct: 180 VVRPGHPCLAAP-ELDDLSRWPVIFPPVSAAIRPQVERWLISHGLS-EPPNRIETVSGAF 237 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 D + L+ LP ++ + +R +P Sbjct: 238 ARVHARDTDAIWMISHGVVRNELSDG-RLIRLPFDTSLTKGPVGLM-------QRQDADP 289 >UniRef50_Q1IHL3 Transcriptional regulator, LysR family n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1IHL3_ACIBL Length = 306 Score = 129 bits (326), Expect = 1e-28, Method: Composition-based stats. Identities = 39/275 (14%), Positives = 92/275 (33%), Gaps = 22/275 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L + +E +AA R+++ +S+ + KL LF + + T Sbjct: 5 IELRHLRYFVAVAEELHFGRAAARLHLAQPPLSQQIKKLEEILGYALFTRTSRAVKLTSA 64 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + ++ +++ + M+ +L A+ + + YP+ Sbjct: 65 GEVFLERAQRTLRHVREDMEEVRSIGRGEVGYLRVGFIGSSMLTVLPAIFGRYRRAYPKV 124 Query: 127 TIKLR-NWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 ++L+ ++ ++ + + +D G + E L+S+ L Sbjct: 125 NLQLQESYTSGVVEGLLKATLDAGILRDGGPTH----------GLTVERLYSEPFVAVLP 174 Query: 186 KDHPALHQT-WNLDTFLRYPHISICWEQSDTWALDN---VLQELGRERTIAMSLPEFEQS 241 HP Q + P + S A + + + G + P++ Sbjct: 175 GKHPLAKQRALSPRALKDEPFV-FYPPYSSKLAYEKPVSICEAHGFRPKVVQEAPQWLTI 233 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPL 276 L + L ++ AP + +V +PL Sbjct: 234 LRLVGA--GLGVSIAPACVERIAAP---DVVCIPL 263 >UniRef50_Q126X0 Transcriptional regulator, LysR family n=4 Tax=Proteobacteria RepID=Q126X0_POLSJ Length = 321 Score = 129 bits (326), Expect = 1e-28, Method: Composition-based stats. Identities = 43/272 (15%), Positives = 85/272 (31%), Gaps = 13/272 (4%) Query: 11 NLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVS 70 ++ L L + R++ +AA I+ T A + L +L LF G+ PT Sbjct: 23 RQIMLLNALDEHRNLRRAAAAIHTTQPAATALLQQLEEGLGVALFERHSRGMEPTVYGEV 82 Query: 71 MEQNLAEWMQMSNLLLDK-PHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQATIK 129 M + + D+ + + ++L + +P+ + Sbjct: 83 MIRYARGVLHDFEYAGDEMAALAAGAAGLVRIGSVMGATPVLLTQGLARFKAGHPRVRVS 142 Query: 130 LRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDH 188 L+ D L A+ RG++D+ ++ E L + V R H Sbjct: 143 LQVDTSDLLMPALLRGDLDVVLGRLPD--------QFYDEDLEIEQLEGEPMSVVARPGH 194 Query: 189 PALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGR-ERTIAMSLPEFEQSLFMAA 246 P L L + I ++ LQ G + + + Sbjct: 195 PLLDLAKVTLADLVAQTWILHPLGSPMRRRVEQALQHAGLAAPPDIVETSSILATTSLLE 254 Query: 247 QPDNLLLATAPRYCQYYNQLHQLPLVALPLPF 278 D + + Q+Y + ++ + LP Sbjct: 255 ASDMISVVPL-DVAQHYANYGLVAILPVELPM 285 >UniRef50_UPI00004DBCAD UPI00004DBCAD related cluster n=2 Tax=Xenopus (Silurana) tropicalis RepID=UPI00004DBCAD Length = 312 Score = 129 bits (326), Expect = 1e-28, Method: Composition-based stats. Identities = 51/286 (17%), Positives = 86/286 (30%), Gaps = 17/286 (5%) Query: 7 TLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTP 66 L L L + S +AA R+ + A+S+ + + LF +S T Sbjct: 2 DLSLQQLEAFVQVAAAGSFRQAALRLGQSQPALSRFIRQAEQTLGARLFDRDTRHVSITD 61 Query: 67 LMVSMEQNLAEWMQMSNLLLDKPHHQ-TPRGLKFELAAESPLMMIMLNALSKQIYQRYPQ 125 + ++ + L + +AA + +L + + Q Sbjct: 62 AGKELLPIAQRVLRDFDDALGDFGEFMAGHSGRIVVAALPSTSIALLPQALAAFSRTHSQ 121 Query: 126 ATIKLRNWDYDSLDAI-TRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 T L + L A+ G D G S R + + + Y LF D + Sbjct: 122 VTFALTEAPAEVLLALVEEGRADFGISVRPAPRQR----------LQYRHLFDDPFVLVC 171 Query: 185 RKDHPA-LHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 R+D P ++ F P I S D V + P Sbjct: 172 RRDDPLAARESVPWSAFSTRPCIVAGSRSSIRPVTDAVFLRQRMPVHPVLEYPSVASCGA 231 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVP 289 + A + + P L+ + LVALPL + V Sbjct: 232 LVAA--GVGITALPMLA--LELLNMVELVALPLQRPLMSRPIGIVT 273 >UniRef50_Q7NCX0 LysR family transcriptional regulatory protein n=1 Tax=Gloeobacter violaceus RepID=Q7NCX0_GLOVI Length = 301 Score = 129 bits (326), Expect = 1e-28, Method: Composition-based stats. Identities = 50/314 (15%), Positives = 110/314 (35%), Gaps = 27/314 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++ L + + + T+AA++++++ AVS ++A L ++ PLF + T Sbjct: 1 MNFEQLRVFVAVAEHLNFTRAAEKLSLSQPAVSSAVAALETYYKVPLFNRMGRRIELTNS 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRGL-KFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + +Q + K + + + + L ++ Q+YP+ Sbjct: 61 GQLLLTEAHKVIQEITTIESKLRETKSLQRGELYIGSSQTVASWWLPPQLQRFRQQYPKV 120 Query: 127 TIKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 +K+ + + + + + + G+VDIG RE +S + + D + Sbjct: 121 QLKVVSGNTEEIGEWVAAGQVDIGLVEREVRNKSLTFNA----------IGGDKMAFVVG 170 Query: 186 KDHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGR---ERTIAMSLPEFEQS 241 K HP +T LD + + + + IA+ LP + Sbjct: 171 KQHPLWERTNIGLDELKSTRWVLRESGSDVRKFFEYLCFTHNIDADKLDIALELPNCAMT 230 Query: 242 LFMAAQPDNLLLATAPRYCQ--YYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 A + L + P + + L L V P+ +E F L+ Sbjct: 231 KRAAEVGAGVALLSVPLVEKEIKWGALRSLNTVLKPV---------MERNFYLISRNSQV 281 Query: 300 HNPKIVWLRETIKN 313 +P + ++ Sbjct: 282 TSPAVKAFSSLVRQ 295 >UniRef50_C1TQZ9 Transcriptional regulator, COG0583 n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TQZ9_9BACT Length = 299 Score = 129 bits (326), Expect = 1e-28, Method: Composition-based stats. Identities = 47/227 (20%), Positives = 88/227 (38%), Gaps = 12/227 (5%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 + L+ L L++E S T+ A+R+ ++ +VS+ +A L +D LF LS TP Sbjct: 1 MSLHQLRTFCTLVEEGSFTRTAERLYLSQPSVSQHIATLEKEYDVILFNRRGRSLSLTPE 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHH-QTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 ++ + +Q S+ + K Q R K EL + + ++L +L +P Sbjct: 61 GNALYTLALDVLQRSDSIPGKFREMQAMRYGKLELGVSTYVGTMVLPSLVAAFRNEHPDV 120 Query: 127 TIKLRN-WDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + ++ D D D + RG+++I + + + D + Sbjct: 121 AMTIQTGNDPDIQDMLRRGDIEIAI-------LEGNARTFNDKDLKTFTIGEDHIVLVAS 173 Query: 186 KDHPALH-QTWNLDTFLRYPHISICWEQSDTWALDNVL--QELGRER 229 KDHP + I + S + L Q +G+ R Sbjct: 174 KDHPLAALPSVTPSHLNEEQLILYEKDCSLCPFVQEYLMEQRVGQHR 220 >UniRef50_B8G0G9 Transcriptional regulator, LysR family n=2 Tax=Desulfitobacterium hafniense RepID=B8G0G9_DESHD Length = 303 Score = 129 bits (326), Expect = 1e-28, Method: Composition-based stats. Identities = 48/293 (16%), Positives = 104/293 (35%), Gaps = 19/293 (6%) Query: 10 LNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMV 69 L L+ L + + +S++ AA+R +++ A+S +++KL L + G T + Sbjct: 3 LEQLMYLVAVNESKSISLAAERSHISQPALSSAISKLEDELGVVLLKRTNSGAYLTDVGE 62 Query: 70 SMEQNLAEWMQMSNLLLDKPHHQTP-RGLKFELAAESPLMMIMLNALSKQIYQRYPQATI 128 + E + + + H + +AA+ + + ++ + +P+ + Sbjct: 63 LIIVKAKEVLSGIDDIKAIAHGNSLVLNGNISIAADPGVNITIMPDILTTFKYNHPKVNV 122 Query: 129 KL-RNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKD 187 L + L I +G+ D G R + LF+D V + Sbjct: 123 LLKVGESNNILQDIEKGKADFGIILSTDAFRK-------SKDMQSIELFADEFVVITGSN 175 Query: 188 HPALHQ-TWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAA 246 + T L L P + E + ++LQ+ G ++ + E + Sbjct: 176 RKLASESTITLKRALSLPILLYNTEYITECGVSSLLQKHG-SFNVSYRVDNLEMMEKILT 234 Query: 247 QPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 Q + + Y + + +PL +L+V L+W R+ Sbjct: 235 QGEAIAFV-PKFMADEYMKTS--KIKKIPL-----SDARLDVSVVLIWSDRHH 279 >UniRef50_Q0MRI6 Putative transcriptional regulator protein (Fragment) n=1 Tax=Rhizobium leguminosarum bv. trifolii RepID=Q0MRI6_RHILT Length = 188 Score = 129 bits (325), Expect = 1e-28, Method: Composition-based stats. Identities = 37/206 (17%), Positives = 63/206 (30%), Gaps = 28/206 (13%) Query: 117 KQIYQRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLF 176 + P ++ + A+ +D+ +L + + LF Sbjct: 6 ATVTSAAPGIRLRFAPRSDKDVQALRDAAIDLDIG----------VLPRDSGELRCQTLF 55 Query: 177 SDVPCVWLRKDHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSL 235 D R HP + F + H+ + +D L ELG R + + + Sbjct: 56 EDRYVGLARLGHPIFDADRITAERFAAWGHVLFSMQADFAGPIDRALAELGHVRDVRLIV 115 Query: 236 PEF---EQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTL 292 P F + A D L+ + P + + + LP D Sbjct: 116 PAFRRYSSA----AASD--LIGSIP---KSLCKSAAIAYRTFDLPVDV-----SGFNIVQ 161 Query: 293 LWHKRNSHNPKIVWLRETIKNLYASM 318 WH R +P WLR I + SM Sbjct: 162 AWHPRMDADPVHRWLRALIFETFHSM 187 >UniRef50_A7MIK1 Putative uncharacterized protein n=2 Tax=Cronobacter RepID=A7MIK1_ENTS8 Length = 315 Score = 129 bits (325), Expect = 1e-28, Method: Composition-based stats. Identities = 45/330 (13%), Positives = 109/330 (33%), Gaps = 43/330 (13%) Query: 2 KKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLG 61 K + D NL+ L ++ + T+A++++ VTP+A++ ++ +L+ +++ LF+ + G Sbjct: 4 KNGVKEFDYNLIKVLDAVITAGNATRASRQLQVTPAAITLAIQRLQQTYNEELFIRTREG 63 Query: 62 LSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNAL--SKQI 119 L PTP + + ++ + M + D +P + ++ + ++ L + Sbjct: 64 LMPTPRAHEIHRAYSKVLDMIDATFDHDARISPWC-EMKIMGDDISEQYYISQLFDMEMF 122 Query: 120 YQRYPQATIKLRNWDYDS----LDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVL 175 + + + + I G+ D+ S E + Sbjct: 123 ER----FRLHCSSVSGKDSSKKISDIRNGKGDLLISTHYFSDPDIEQIILDQYR------ 172 Query: 176 FSDVPCVWLRKDHPALH-QTWNLDTFLRYPHISICW---EQSDTWAL--DNVLQELGRER 229 +P Q L H + + Sbjct: 173 ---TYTAVCHVQNPLCELQQLTLANLFTSRHAIYYPYAITPRLKKEITNNESFSFFNSHF 229 Query: 230 TIAMSLPEFEQSLFMAAQPDNLLLATAPRYCQYY---NQLHQLPLVALPLPFDESQQKKL 286 ++ + L + ++A P + +++ L+ LP + Sbjct: 230 SVGYNTESINGLLSIIENSS--MIAILPEKIARFFQSQGRYRIALIDLPDAIEFEI---- 283 Query: 287 EVPFTLLWHKRNSHNPKIVWLRETIKNLYA 316 + W HNP+ R+ I+++ A Sbjct: 284 -IKIYAYW---YRHNPQ----RDQIRDVIA 305 >UniRef50_B1G558 Transcriptional regulator, LysR family n=1 Tax=Burkholderia graminis C4D1M RepID=B1G558_9BURK Length = 307 Score = 129 bits (325), Expect = 1e-28, Method: Composition-based stats. Identities = 42/294 (14%), Positives = 98/294 (33%), Gaps = 14/294 (4%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 + L + + + +M +VT+AA+ ++++ AVS+ +A L + LF L Sbjct: 1 MDTSELKIRQIEAFRAVMLRHTVTRAAESLHISQPAVSRLIADLESRVGFVLFDRQQGRL 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGL-KFELAAESPLMMIMLNALSKQIYQ 121 +PT + + + + + +A + + +L ++ + + Sbjct: 61 TPTAEARVLSEEVERAFVGMDRIAQAARQIRAMRRGSLRVAGSPAVALDLLPSVIARFVE 120 Query: 122 RYPQATIKLRNWDYDS-LDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 R+ I L + ++ + G+ D+G A+ E L + V Sbjct: 121 RHAGIDISLLTHSATTVVEKVASGQCDVGVIAEPIP----------HPAVRSERLANAVM 170 Query: 181 CVWLRKDHPALHQ-TWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFE 239 + + H + + +S A+D V + G R + + + Sbjct: 171 RCIVPRGHRLARKASLTPADLRGERFVSFPQSFDARSAIDRVFVDAGIARDLVIEAQLSQ 230 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLL 293 + + A + L P + Q + +P P +L+ Sbjct: 231 AIVALVANGAGVAL-IDPVTAAFARQRVAVRPFTPAVPDHFYLVTNGSRPLSLV 283 >UniRef50_B0RYQ5 Transcriptional regulator, LysR family n=11 Tax=Proteobacteria RepID=B0RYQ5_XANCB Length = 435 Score = 129 bits (325), Expect = 1e-28, Method: Composition-based stats. Identities = 44/311 (14%), Positives = 103/311 (33%), Gaps = 15/311 (4%) Query: 6 TTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPT 65 + L L L + S + AA R V+ A+ +++ L + PL V + T Sbjct: 102 RRVSLGQLQALVAVDVAGSYSLAAVRTGVSQPAIYRAVQTLADVVEVPLIVRRGKSVHAT 161 Query: 66 PLMVSMEQNLAEWMQMSNLLLDKPHHQ-TPRGLKFELAAESPLMMIMLNALSKQIYQRYP 124 P+ + + + + + LD+ + + + ++L + + +P Sbjct: 162 PVALRLLRQVRLALAELGAGLDEVAALRSQHAGRVTVGVMPLARAVLLPRTLARFARSHP 221 Query: 125 QATIKLRNWD-YDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVW 183 A + + + L + G +D+ +++ + LF D + Sbjct: 222 GAIVSVVEGPYPELLAQLREGGLDLLIGALREPLPVHDVV--------QDALFDDAAVIV 273 Query: 184 LRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRE-RTIAMSLPEFEQSL 242 R HP Q + L YP + + + ++ E + Sbjct: 274 ARSGHPLAGQAYAFAQLLDYPWVVAATGTPLRARWERMFRDQQLEPPPPRIECGSVLVIR 333 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 + + D L R + Q L L + L + + +++ + WH + + Sbjct: 334 GLLLEDDWL--TVMSRDQFLFEQRAGL-LCEIGLAVPQLR-RQIGLTTRADWHPTRAQSA 389 Query: 303 KIVWLRETIKN 313 + +R+ + Sbjct: 390 FVQTVRQVCAD 400 Score = 72.7 bits (178), Expect = 2e-11, Method: Composition-based stats. Identities = 17/80 (21%), Positives = 39/80 (48%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L + ++ + SV+ AA ++N++ A+++++A+L LF P G++ T Sbjct: 7 INLRHLYAMHVVAEAGSVSAAAPQVNLSQPALTQAIARLEQQLGVRLFDRHPGGMAGTEA 66 Query: 68 MVSMEQNLAEWMQMSNLLLD 87 + +A + L Sbjct: 67 TRLLAPRVARALAHLGRGLR 86 >UniRef50_A1W235 Transcriptional regulator, LysR family n=6 Tax=Burkholderiales RepID=A1W235_ACISJ Length = 309 Score = 129 bits (325), Expect = 1e-28, Method: Composition-based stats. Identities = 42/260 (16%), Positives = 78/260 (30%), Gaps = 16/260 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L L + + +AA+R+++ +S S+ KL PLF + G+ TP Sbjct: 1 MNLRQLSQFVALAETGNFHRAAERLHMAQPPLSVSIRKLEEELGSPLFERTTTGVVLTPA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNALSKQIYQRYPQA 126 +M + + + L +L L + QRYPQ Sbjct: 61 GEAMLGDARRALFHAQQCRQAVQDAREGEGGLLRLGIIGSATYALLPQLIPSLRQRYPQI 120 Query: 127 TIKLRN-WDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 ++L + L+ + D G P + L D + + Sbjct: 121 ELELSEATSSEILEGLVSRRFDAGLLRYPVLD---------PSGFELLPLDRDDFVLAVA 171 Query: 186 KDHPALH-QTWNLDTFLRYPHISICWE--QSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 + P L P I S + Q G +A + + + Sbjct: 172 ESSPLAQRDAIALAEAAHEPFIMYPQHKVPSLSALAMMRCQFSGFSPRVAQEAMQVQTIM 231 Query: 243 FMAAQPDNLLLATAPRYCQY 262 + A L + + Sbjct: 232 SLVAS--GLGVGLVASVARQ 249 >UniRef50_D1XD48 Transcriptional regulator, LysR family n=2 Tax=Streptomyces RepID=D1XD48_9ACTO Length = 329 Score = 129 bits (325), Expect = 1e-28, Method: Composition-based stats. Identities = 36/252 (14%), Positives = 78/252 (30%), Gaps = 13/252 (5%) Query: 13 LLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSME 72 L + + + VT+AA + V S +S+++ +L LF +S TP + Sbjct: 40 LAYFEAVARHEHVTRAAHELGVPQSTLSRAMVRLEQDLGVALFARRGRTVSLTPAGRTFL 99 Query: 73 QNLAEWMQMSNLLLDK-PHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQATIKLR 131 ++ + D P K + + +L + +P+ +L Sbjct: 100 GSVERALAEVEKAADSVRADADPTAGKVAFGFLHTMGSETVPSLIRAFRADHPRVRFQLV 159 Query: 132 -NWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPA 190 N+ ++ + G +D+ + + L + + DH Sbjct: 160 QNYGEAMIERLRAGGLDLCLTSPVPDA----------PDLVARRLDEQRLRLVVPDDHRL 209 Query: 191 LH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQPD 249 + L +++ D++ E G +A E E + A Sbjct: 210 AGRRRVRLAEAAEEAFVTLEPGYGLRRITDDLCTEAGFTPRVAFEGEEAETLRGLVAAGL 269 Query: 250 NLLLATAPRYCQ 261 + L P + Sbjct: 270 GVALLPPPAVAR 281 >UniRef50_B9ZP87 Transcriptional regulator, LysR family n=1 Tax=Thioalkalivibrio sp. K90mix RepID=B9ZP87_9GAMM Length = 290 Score = 129 bits (325), Expect = 1e-28, Method: Composition-based stats. Identities = 50/267 (18%), Positives = 92/267 (34%), Gaps = 17/267 (6%) Query: 13 LLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSME 72 L ++ + + AA+R+ +T A+SK + L A PLF + PT + + Sbjct: 11 LQAFVAVVDTGAFSAAAERLYLTQPAISKRIQSLEATLQRPLFERQGRRVRPTEVAERLL 70 Query: 73 QNLAEWMQMSNLLLDKPHHQTPRGL-KFELAAESPLMMIMLNALSKQIYQRYPQATIKLR 131 E + + + + + LA + + L A + RYP+ ++L Sbjct: 71 PEAREILARLHAIEQQVADLDHVVRGRIRLATSHHIALHRLPAPLAALRTRYPELELELA 130 Query: 132 NWDYDS-LDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPA 190 D ++ ++A+ G+ D+ + LP A D +++D + + Sbjct: 131 FMDSEAGIEAVMHGDADLALATLPED---------LPKAADAHTVWTDELVPMIARGRAQ 181 Query: 191 LHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQPDN 250 L +P I + +D L G A P E M A Sbjct: 182 DAPLETLQRLHDWPAILPPAGSTTRRQIDQALAAQGLHAAAAQESPYLEVIRMMIAA--G 239 Query: 251 LLLATAPRYCQYYNQLHQLPLVALPLP 277 L + PR L ++ P P Sbjct: 240 LGIGFLPRTMA----TDDLTILEWPAP 262 >UniRef50_A4BHD6 Transcriptional regulator lysR family protein n=1 Tax=Reinekea blandensis MED297 RepID=A4BHD6_9GAMM Length = 298 Score = 129 bits (325), Expect = 1e-28, Method: Composition-based stats. Identities = 38/244 (15%), Positives = 84/244 (34%), Gaps = 13/244 (5%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +DLN L + + S ++A +R+ +T A+SK +A L + LF + T Sbjct: 1 MDLNSLEAFLTVAELGSFSRAGERLFLTQPAISKRIANLESQLGTALFDRIGREVYLTEA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNALSKQIYQRYPQA 126 ++ + + T + LA+ + + L + ++ P A Sbjct: 61 GQMLQNRAQTLIDELRDIQSSVTQLTSNDIRQLNLASSHHIGLHYLGPILRRFVSNNPSA 120 Query: 127 TIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + +R +++A+ + +++I + S L + L+ D + Sbjct: 121 KLDVRFMESEQAVNALLKRDIEIALTTIP---------SPLHRDLQATTLWQDKLHFVVS 171 Query: 186 KDHPALH--QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 KDHP L+ I + + ++ + MS+ E Sbjct: 172 KDHPLAGRKDRLRLNELAHLTAILPDRQTTTFQIIEKTFERHHIPLKRVMSVNYLETIRA 231 Query: 244 MAAQ 247 + + Sbjct: 232 LVSH 235 >UniRef50_Q46NS6 Transcriptional regulator, LysR family n=6 Tax=Burkholderiales RepID=Q46NS6_RALEJ Length = 313 Score = 129 bits (325), Expect = 1e-28, Method: Composition-based stats. Identities = 54/312 (17%), Positives = 103/312 (33%), Gaps = 21/312 (6%) Query: 10 LNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMV 69 L L L L + +++++A +N T +SK L L PLF GL PTP Sbjct: 9 LRNLQMLLSLAETGNMSQSAALLNTTQPGLSKWLKDLEDDIGLPLFERQARGLQPTPYGE 68 Query: 70 SMEQNLAEWMQMSNLLLDKPHH-QTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQATI 128 S+ ++ + D + + + Q+ QR P+A + Sbjct: 69 SLIEHARRITAQLDTARDDLAAMREGGSGLVVVGTSGASAADTVPLAVLQLLQRMPRAQV 128 Query: 129 KLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKD 187 +L D ++ + E+DI + + + E L+ + R Sbjct: 129 RLVETTMDRLMNQLAHNELDIVVGRSAPELQDAQTIG--------ESLYLEPIHFVARPR 180 Query: 188 HPALHQ-TWNLDTFLRYPHISICWEQSDTWALDNVLQELGRE-RTIAMSLPEFEQSLFMA 245 HP T + Y + AL+ L GR + +L + Sbjct: 181 HPLATPNTVTWEALQSYRWVVWPRGTPIRNALEAALASAGRPLPADCVESNSTVLNLTLL 240 Query: 246 AQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIV 305 D + LA+ R + +L L +V L L ++ W + + + + Sbjct: 241 NSSDMIGLASH-RTARRLEELGALRIVPLRLA--------GFGSVSMYWREDSVNRSAVA 291 Query: 306 WLRETIKNLYAS 317 + + ++ Sbjct: 292 AMLDCLRRAADR 303 >UniRef50_C6VMR5 Transcription regulator n=5 Tax=Lactobacillus RepID=C6VMR5_LACPJ Length = 309 Score = 129 bits (325), Expect = 1e-28, Method: Composition-based stats. Identities = 39/255 (15%), Positives = 84/255 (32%), Gaps = 11/255 (4%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L+ + L + + + KAA+ + ++ ++S ++ KL PLF + T + Sbjct: 1 MNLRHLVFFKELARTQHMAKAAENLGISQPSLSYAIKKLEHELGVPLFEADGRNIKLTSI 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQ-TPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + + + + P +L L ++ L + Sbjct: 61 GGVYLKYVTATLNDLSQGNELVKQLMDPDTGHVKLGFTYTLGQQLVPELLSHFKNQSENQ 120 Query: 127 TIKLRNWDYDS---LDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVW 183 I +S L A+ + DI + + D+ L Sbjct: 121 AITFELGQGNSGVLLQALADEKYDIVLASNVDRLGEQLTAHL----FDFIPLVQQEIVAV 176 Query: 184 LRKDHPALHQ-TWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 + DHPA+ + +++ YP I +D +L + +A + E Sbjct: 177 VPNDHPAVQKNPLHVEDLAPYPMILFSQNSGLRPLIDQILSAAHVQPKVAYEVEEDHTMA 236 Query: 243 FMAAQPDNLLLATAP 257 N+ +A P Sbjct: 237 GFVRY--NMGVALMP 249 >UniRef50_A0KPM6 Transcriptional regulator, LysR family n=2 Tax=Gammaproteobacteria RepID=A0KPM6_AERHH Length = 297 Score = 129 bits (325), Expect = 1e-28, Method: Composition-based stats. Identities = 42/289 (14%), Positives = 85/289 (29%), Gaps = 17/289 (5%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +D+ L L++E+S T+A++++ VT +SK + + PL + + T Sbjct: 1 MDIRALRYFVELVREQSFTRASEKLFVTQPTISKMIRNMEEELGQPLLSRAGRRFTLTDS 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + L + + L + + L + RYP+ Sbjct: 61 GRVLFNRAQTILAEMQQLEAELADLQSLQFGRLALGIPPMVGHVYA-DLIRAYRSRYPKV 119 Query: 127 TIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + + + A+ GE+D+ + + L VL Sbjct: 120 ELSIVEYGGRRIEQAVLEGELDLAITMLPTKEGGALSALELDQYPIQVVL---------- 169 Query: 186 KDHPALHQ--TWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 D P L+ P + + + L+ + G E +A +++ Sbjct: 170 PDLPRWRDCPEIRLEALCDEPFLLYTQAFTLSERLEQACRVAGFEPQVAARSSQWDFLTA 229 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTL 292 M + +A P L L L L Sbjct: 230 MVRS--GMGVAFLPEPICRRLAPDGLVLRPLVPELSWRLGVIWPSERYL 276 >UniRef50_Q1GLW4 Transcriptional regulator, LysR family n=5 Tax=Rhodobacteraceae RepID=Q1GLW4_SILST Length = 301 Score = 129 bits (325), Expect = 2e-28, Method: Composition-based stats. Identities = 49/311 (15%), Positives = 96/311 (30%), Gaps = 29/311 (9%) Query: 13 LLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSME 72 L + + +++ AA+ + TPSAVS L +L +PLF + T L + Sbjct: 8 LRGFATVARSGNLSDAAQVLGRTPSAVSMMLKQLETHLGEPLFE-TDRKSKLTALGAFVL 66 Query: 73 QNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNALSKQIYQRYPQATIKLR 131 + +Q + ++ +A + ++ + + Y I+LR Sbjct: 67 EQAERELQQFDNMVRAIEGFAKATHGHVRIATVPSVAGTIIPQVFSRHINDYVNVDIELR 126 Query: 132 NWDYDS-LDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPA 190 + D S L ++R +DIG + L + + L SD V H Sbjct: 127 DMDSHSILHELSRDRIDIGIAT----------LGQQGAGLSSQHLLSDTFGVICAPSHEL 176 Query: 191 LH--QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQP 248 + I+ + A L + +S L M Sbjct: 177 ADSTGPVTWEALADERLIANSLSAGISAAASVALHD-----RAMLSAHNLTSILGMVQA- 230 Query: 249 DNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWLR 308 N+ + P + L L + + +L ++ +P L Sbjct: 231 -NIGITILPEMAVRASNSAGLVFRPL-------TEPHAKREIHMLRRADSNQSPAARLLE 282 Query: 309 ETIKNLYASMA 319 I + ++ Sbjct: 283 RHILQIAKEIS 293 >UniRef50_C6CZP2 Transcriptional regulator, LysR family n=5 Tax=cellular organisms RepID=C6CZP2_PAESJ Length = 300 Score = 129 bits (325), Expect = 2e-28, Method: Composition-based stats. Identities = 43/242 (17%), Positives = 82/242 (33%), Gaps = 14/242 (5%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++++ L L + + S KA + +N+T AVS + L F L ++ T Sbjct: 1 MNISQLETLLTISKTMSFRKAGELLNLTQPAVSAQIKTLEEEFKTVLIDR-NQPVTLTDH 59 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 ++ + + L K L S + + +L + +YP Sbjct: 60 GKVFLEHAERILAVVEELKQKLSDLNAIPQGHIVLGTTSSMAIQILPRVLSYFQDQYPLI 119 Query: 127 TIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + L ++ G VD+G + +S +D +L+ D + Sbjct: 120 KTTIHTMPSSQVLASVENGSVDMGITY----------ISEKNPNMDSSILYYDSFVLVAS 169 Query: 186 KDHPALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 HP +D YP I + + LD + ++ + I M L E+ M Sbjct: 170 PAHPLSQVAHTTIDMIKDYPFIMLAPDTLGRRFLDQIFKKNNIQPNIIMELSSSEEVKRM 229 Query: 245 AA 246 Sbjct: 230 VE 231 >UniRef50_C3KMF5 Transcriptional regulator, LysR family n=42 Tax=Bacteria RepID=C3KMF5_RHISN Length = 308 Score = 129 bits (325), Expect = 2e-28, Method: Composition-based stats. Identities = 40/254 (15%), Positives = 80/254 (31%), Gaps = 16/254 (6%) Query: 6 TTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPT 65 + L + +++SV KAA +NVT AV+K++ +L +F G+ T Sbjct: 4 ARIKFRHLQTFVEVARQKSVVKAADLLNVTQPAVTKTIRELEEVLGVSVFERDGRGIKIT 63 Query: 66 PLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGL-KFELAAESPLMMIMLNALSKQIYQRYP 124 ++ + LD + + A + ++ + Sbjct: 64 RYGEVFLRHAGAALTALRQGLDSVSQERSGDGPPIRIGALPTVSTRIMPRAMALFLEEKT 123 Query: 125 QATIKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVW 183 A IK+ + L+ + G++D+ + R +E L+S+ Sbjct: 124 GARIKIVTGENAVLLEQLRVGDLDLVVGRLAAPDRMT--------GFSFEHLYSEQVVFA 175 Query: 184 LRKDHPALHQTWNL-DTFLRYPHISICWEQSDTWALDNVLQE---LGRERTIAMSLPEFE 239 +R HP L ++ YP + ++ L G I F Sbjct: 176 VRAGHPLLSGKQSVFAHLGDYPVLMPTRASIIRPFVERYLIANGIAGLPNQIETVSDSFG 235 Query: 240 QSLFMAAQPDNLLL 253 D + + Sbjct: 236 --RAFVRSSDAIWI 247 >UniRef50_C0ZVG6 Putative LysR family transcriptional regulator n=1 Tax=Rhodococcus erythropolis PR4 RepID=C0ZVG6_RHOE4 Length = 314 Score = 128 bits (324), Expect = 2e-28, Method: Composition-based stats. Identities = 49/318 (15%), Positives = 104/318 (32%), Gaps = 25/318 (7%) Query: 7 TLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTP 66 L + L+ L L E S+ AA+ + VT A+++++ + A + LF P G+ PT Sbjct: 10 RLKIRHLVLLTTLADEGSMVGAAEVLRVTQPAITRAVREAEAVLEVSLFDRKPRGVLPTQ 69 Query: 67 LMVSMEQNLAEWMQMSNLLLDKPHHQTP-RGLKFELAAESPLMMIMLNALSKQIYQRYPQ 125 ++ + D + +L + + P Sbjct: 70 FGEIFLESARTVLNNLRNAADHIDELQRVGARPVRVGTNLAGAYSLLPQALVALKKTQPN 129 Query: 126 ATIKLRN-WDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 ++ + + ++ R E+D+ + S + L+ + + + Sbjct: 130 LSVSVIEGLPEELATSLARDEIDLVVGRLDP--------SGFRNGAHHIRLYDEPVRIVV 181 Query: 185 RKDHPALHQ-TWNLDTFLRYPHISICWEQSDTWALDNVLQE--LGRERTIAMSLPEFEQS 241 R+DHPA+ + +++ + YP I LD + LG I + Sbjct: 182 RQDHPAVQRHEQSIEDLMDYPWILPGRPTQLRDELDELFSREGLGLPHNI-IECSTILTL 240 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 + D +A P ++ + +L S + +L R+ Sbjct: 241 RSILIGTD--AIAPLPMLIGAGDEQLTMLTTSLE-TVPRSIGITMPADRSLSASARS--- 294 Query: 302 PKIVWLRETIKNLYASMA 319 L + I + +A Sbjct: 295 -----LIDLIVDAARVIA 307 >UniRef50_A9B3V4 Transcriptional regulator, LysR family n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9B3V4_HERA2 Length = 298 Score = 128 bits (324), Expect = 2e-28, Method: Composition-based stats. Identities = 43/313 (13%), Positives = 95/313 (30%), Gaps = 26/313 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L+ L + + + +VTKAA ++ ++SK+L L LF G+ + Sbjct: 1 MELSQLRYFEAVARLGNVTKAAHEQHIAQPSLSKALRALEQELGVHLFDRVGRGVELSDA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDK-PHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + L + ++ +RY Sbjct: 61 GKLLLPYARRVLAELQAARHALQSRADLTVGHVSLGVTPTVGTRLIPQALAAFNRRYRGI 120 Query: 127 TIKLRNWD-YDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 ++L + ++ + G VD+ +S+L ++ L S+ V + Sbjct: 121 QLELHEAGASELVELLNAGVVDLAI------------VSALVHGVESTTLMSEPLVVAVG 168 Query: 186 KDHPALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 H Q+ + I + ++ G I + E + + + Sbjct: 169 LQHRFAQRQSIAANELRDEGFILFPQGYELRNYTLQLCEQAGFAPRIVLDGGEMDTVVSL 228 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 A L +A P+ +Q L + L+ L+ H + +P Sbjct: 229 VAA--GLGVAVVPQLA--IDQRMGLHALM-------IDAGGLQRTLRLIRHSQRQPSPAA 277 Query: 305 VWLRETIKNLYAS 317 L + + Sbjct: 278 AALHRVLHEWVSQ 290 >UniRef50_Q9F1R2 HTH-type transcriptional activator cmpR n=38 Tax=Bacteria RepID=CMPR_SYNE7 Length = 323 Score = 128 bits (324), Expect = 2e-28, Method: Composition-based stats. Identities = 46/296 (15%), Positives = 84/296 (28%), Gaps = 28/296 (9%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 + L L+ L + + S T+AA+ + +T VS + +L PLF L Sbjct: 1 MKNLTLHQLKVFEAAARHSSFTRAAEELYLTQPTVSIQVKQLTKAVGLPLFEQIGKRLYL 60 Query: 65 TPLMVSMEQNLAEWMQMSNLLLDKPHHQTP-RGLKFELAAESPLMMIMLNALSKQIYQRY 123 T + + + + L + + LA + L QRY Sbjct: 61 TEAGRQLYKTTRQVFEQLEQLDMTIADLQGMKQGQLRLAVI-TTAKYFIPRLIGPFCQRY 119 Query: 124 PQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAID--YEVLFSDVPC 181 P + L+ +++ L + + +LS P D + + Sbjct: 120 PGINVSLKVTNHEGL-----------INRINDNLDDLYVLSRPPSGFDITVQPFLDNPLV 168 Query: 182 VWLRKDHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQ 240 V HP +Q +L+ + P I A + + + + L E Sbjct: 169 VVGPASHPLANQRGISLERLAQEPFILRERGSGTREATEQLFAAHNLNLNVKLDLGSNEA 228 Query: 241 SLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHK 296 L LA + + + P WH Sbjct: 229 IKQAILG--GLGLAVLSYHTLTSAGATP----------ELKMFEVEGFPIHRQWHA 272 >UniRef50_B4ETA7 LysR-family transciptional regulator n=37 Tax=Enterobacteriaceae RepID=B4ETA7_PROMH Length = 296 Score = 128 bits (324), Expect = 2e-28, Method: Composition-based stats. Identities = 44/303 (14%), Positives = 99/303 (32%), Gaps = 23/303 (7%) Query: 7 TLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTP 66 + L L +++ S T+A++++ ++ SAVS SL L LF L Sbjct: 2 RITLRQLEVFTEVLKSGSTTQASQQLALSQSAVSASLTDLENQLGVQLFDRVGKRLVTNE 61 Query: 67 LMVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + + + +AA + + +L + ++ YP Sbjct: 62 HGRLLYP---RALSLLERATEVEQLFQAGNGALRIAASTTIGNYILPQMLGNFHRNYPDI 118 Query: 127 TIKL-RNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 +++ + + +++ VD+G + + + D ++ Sbjct: 119 PLEMSIGNTEEVVKSVSEFRVDLGL----------IEGACQSSELISQKWLLDEMVIFCS 168 Query: 186 KDHPALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 +HP +T L P I L+++L I M L E Sbjct: 169 PEHPLAKAKTVTLADLQSAPWILRENGSGTRDVLNHLLFASLPGYRIEMELGNSEAIKHA 228 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 + + + R Q + L + + + KL+ L++H++ + + Sbjct: 229 VMY-EMGISCLSRRVIQDQIESGSLKEIKV-------EGLKLQRTLYLVYHRQKHVSDAL 280 Query: 305 VWL 307 L Sbjct: 281 KKL 283 >UniRef50_Q025Z5 Transcriptional regulator, LysR family n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q025Z5_SOLUE Length = 301 Score = 128 bits (324), Expect = 2e-28, Method: Composition-based stats. Identities = 49/256 (19%), Positives = 85/256 (33%), Gaps = 15/256 (5%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 L++ L ++ + E ++T+AA R+ +T SA+S LA L LF P G+ TP Sbjct: 6 LEIRHLKLVETIAAEGAMTRAAARLYMTQSALSHQLAGLEESIGISLFRRVPRGMILTPA 65 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQT-PRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + M L+ ++ E L + K +P+ Sbjct: 66 GEKLLACARSVLPMVREALESVTAAESEAQCTLRISTECYTCYHWLPSRLKAFQASFPRV 125 Query: 127 TIKLR-NWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 +++ +DA+ GE+D+ AI LF D L Sbjct: 126 EVEIVAEATRRPIDALLAGELDLAIVSDLPAQ----------AAITSCPLFEDEMVAILS 175 Query: 186 KDHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 +H H+ + F+ I+ L G + E + M Sbjct: 176 PEHRLAHRRNLSPRDFVAERLITYSVPLQQLGVYRQFLHPAGVTPARVSRVDLTEAIIEM 235 Query: 245 AAQPDNLLLATAPRYC 260 NL +A R+ Sbjct: 236 VKA--NLGIAILARWA 249 >UniRef50_D0IWI0 Transcriptional regulator, LysR family n=3 Tax=Comamonadaceae RepID=D0IWI0_COMTE Length = 304 Score = 128 bits (324), Expect = 2e-28, Method: Composition-based stats. Identities = 40/309 (12%), Positives = 93/309 (30%), Gaps = 22/309 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +DL L ++++ T+AA+ ++VT +SK + L F L + G+ T Sbjct: 1 MDLRALRYFIEVVRQNGFTRAAETLHVTQPTISKMVKALEDEFGGRLLLREGRGVQLTDA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRGL-KFELAAESPLMMIMLNALSKQIYQRYPQA 126 + E ++ + LL + L M + QRYP Sbjct: 61 GQVVYDRGMEILEQAQLLRRQVAEVDHITRGDLSLGIMPTTGHYMAP-VIALFQQRYPGV 119 Query: 127 TIKLRNWDYDS-LDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 +++ + I G++D+ + + E + V Sbjct: 120 NLQVNEQGARAQYQLIQEGKLDMALGLFAAPDPALERYTVARQKTR---------VVLPA 170 Query: 186 KDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMA 245 + Q P + + + + + G + + ++ + Sbjct: 171 QQVTDPGQPMRWSDLRELPFVLYTSDFALHEHVLQQCEAAGFTPQVKLQTRYWDFIGHLV 230 Query: 246 AQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIV 305 A + +A + + + + PL + ++ L+W Sbjct: 231 AA--QVGVAVMFEHV--IARYDPQRVASRPL-----VEPEIPWDVALMWRPGYLSRAAQA 281 Query: 306 WLRETIKNL 314 WL ++ + Sbjct: 282 WL-NCVREV 289 >UniRef50_B1JQ91 Transcriptional regulator, LysR family n=11 Tax=Enterobacteriaceae RepID=B1JQ91_YERPY Length = 392 Score = 128 bits (324), Expect = 2e-28, Method: Composition-based stats. Identities = 43/308 (13%), Positives = 103/308 (33%), Gaps = 19/308 (6%) Query: 13 LLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSME 72 L L +++ A+ +++T SAVS +L L LF +P G+ PTP + Sbjct: 97 LQIFLSLYRQQHALHVAQALDITQSAVSAALKVLEKGAGMYLFHRTPKGMLPTPAGHEIA 156 Query: 73 QNLAEWMQMSNLLLDK-PHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQATIKLR 131 ++ + + + ++ H+ + A +L ++ R+P I Sbjct: 157 PCISRALNALHHIPEEITAHRGDLTGSVRVGALPLSRARLLPQAMIKLISRHPGIKIVTN 216 Query: 132 NWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPA 190 + +L + G++D + I E+LF + + R +HP Sbjct: 217 ESGFTALIAELRAGDIDFIIGALRNEQMLL--------DIHSEILFEEELILLARPNHPL 268 Query: 191 LHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGR-ERTIAMSLPEFEQSLFMAAQPD 249 + + L+ ++G + + + D Sbjct: 269 SDRRVKNQELKDIQWVLPRNHAPSRHLLEVAFCKMGLASPQPVVESGDPAVVRALLLGSD 328 Query: 250 NLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWLRE 309 ++A + + + + PL + + ++ L+ ++ ++P L Sbjct: 329 --MVAAVSSHQLDFEVSEGILI---PLQVNLTGTRR---EIGLMTRQKALNSPATDALIN 380 Query: 310 TIKNLYAS 317 ++ + S Sbjct: 381 CVREVIQS 388 Score = 48.5 bits (115), Expect = 3e-04, Method: Composition-based stats. Identities = 13/63 (20%), Positives = 25/63 (39%) Query: 20 MQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSMEQNLAEWM 79 ++ + + AA + T SA+++S+ L LF G+ T L + M Sbjct: 3 AEQGAASLAALNLFRTQSAITRSIRDLEHTLAISLFERHAKGMLLTDLGNVILPRARSAM 62 Query: 80 QMS 82 + Sbjct: 63 EEL 65 >UniRef50_B6IX78 Hydrogen peroxide-inducible genes activator n=1 Tax=Rhodospirillum centenum SW RepID=B6IX78_RHOCS Length = 312 Score = 128 bits (324), Expect = 2e-28, Method: Composition-based stats. Identities = 43/313 (13%), Positives = 98/313 (31%), Gaps = 27/313 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L + + + R +A++ +V+ +S L KL PLF + + PT L Sbjct: 1 MNLRDLRYVVAIAEHRHFGRASEACHVSQPTLSGQLRKLEDRLGAPLFERTSKWVVPTAL 60 Query: 68 MVSMEQNLAEWMQMSNLL-LDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + ++ ++ ++ + + P L L ++ + ++ QR+P Sbjct: 61 GQQVVRHARAALEQADAIEALARAARDPLAGPLRLGVIPTLSPYLMPLVLPELRQRHPGL 120 Query: 127 TIKL-RNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 T+ L + + ++ + R E+D + + LF + + Sbjct: 121 TLVLWEDLTANLIERLRRHELDAALIATGTDGEDLIGVD----------LFVEPFLAAVP 170 Query: 186 KDHPALHQTW-NLDTFLRYPHISICWEQSDTWALDNVLQELGRERT--IAMSLPEFEQSL 242 HP + W + D R + + + L G + + + Sbjct: 171 TGHPLAARDWVSEDDLQRADMLVLA---DGHCLREQALGVCGAPPPGGDDLRAASLDTLV 227 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 M P + L L + L+W Sbjct: 228 SMV--SAGYGCTLVPALAAPGLERRGLVLRPV-------DSFGACRTVRLVWRPTFPRQK 278 Query: 303 KIVWLRETIKNLY 315 + L E ++++ Sbjct: 279 ALDALAELVRSVV 291 >UniRef50_B4WMZ4 Putative uncharacterized protein n=1 Tax=Synechococcus sp. PCC 7335 RepID=B4WMZ4_9SYNE Length = 289 Score = 128 bits (324), Expect = 2e-28, Method: Composition-based stats. Identities = 51/294 (17%), Positives = 103/294 (35%), Gaps = 25/294 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L + E +AAKR+N+ +S + +L + D LF + +S T Sbjct: 1 MNLRQLNYFLAVANELHFGQAAKRLNMAQPPLSMQIKQLESDLDVQLFERTQRKVSLTAA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQT-PRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 +++ + ++ + K + +A S M +L Q YPQ Sbjct: 61 GEVLKKEAEQILERIEVARRKTQQADRGETGQMAIAFVSSAMYSILPPWISAFRQSYPQV 120 Query: 127 TIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + + + + + ++DIGF S I +V++ + V L Sbjct: 121 ALTFQEATGLEQISGLLSHQIDIGFVRPPIEDVS----------ISDKVVWREPLVVALP 170 Query: 186 KDHPAL-HQTWNLDTFLRYPHISICWE--QSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 + H H+ ++ + + P I I + + Q+ I + + + L Sbjct: 171 EGHRLSTHKAISISSLEQEPFILIQRPLASEMYDKIISFCQQASFSPNITQTAQQLQTIL 230 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHK 296 + A NL +A P Q + + P + V ++W K Sbjct: 231 GLVAA--NLGIAILPTAAQKLQRA---GICYRPF-----IETTPAVELVMIWRK 274 >UniRef50_B9Y467 Putative uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y467_9FIRM Length = 309 Score = 128 bits (324), Expect = 2e-28, Method: Composition-based stats. Identities = 42/306 (13%), Positives = 95/306 (31%), Gaps = 21/306 (6%) Query: 10 LNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMV 69 L L + + S+TKAA+ ++++ AVS ++ +L ++ LF L T Sbjct: 3 LRHLRIFVEVCRTGSITKAAESLHLSQPAVSLAIRQLEDYYGILLFDRISKKLYLTESGN 62 Query: 70 SMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQATIK 129 M + ++ + + + + + + ML L ++ R+PQ + Sbjct: 63 KMLSYASHIIESFDDMETQLKNWDSA-GTLRIGSSISTGTQMLPQLVRRFNLRFPQIRTQ 121 Query: 130 LRNWDYDSLDA-ITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDH 188 + + ++ + ++D+ S I ++D V H Sbjct: 122 VLIDNSRIIEDKVLTNQLDLAL----------VESLSYSPDIVCVPFYTDRLIVITAPKH 171 Query: 189 PALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQ 247 P + YP + +D +L + T + + Sbjct: 172 PLTQNPECTVKALADYPVLLREPGSGTREVVDALLVTAEVQITPLWESTSTRSIINAVKE 231 Query: 248 PDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWL 307 N+ ++ P + LPL + +++ H+ P Sbjct: 232 --NIGISILPYELVKNEIQSG-AVAGLPLASPLPNRTC-----SIIHHRNKYLTPSAQAF 283 Query: 308 RETIKN 313 E + Sbjct: 284 IEVCQE 289 >UniRef50_C0BJQ2 Transcriptional regulator, LysR family n=1 Tax=Flavobacteria bacterium MS024-2A RepID=C0BJQ2_9BACT Length = 303 Score = 128 bits (324), Expect = 2e-28, Method: Composition-based stats. Identities = 44/310 (14%), Positives = 111/310 (35%), Gaps = 26/310 (8%) Query: 7 TLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTP 66 L+ L + ++ KA++R+ ++ +SK + +L L +S TP Sbjct: 4 QLEYRHLRYFLAVAEDLHFRKASERLFISQPGLSKQIKELEDHLGVQLLERHSRKVSLTP 63 Query: 67 LMVSMEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQIYQRYPQ 125 +++ L Q + +L+ +L M ++ L + +++P+ Sbjct: 64 SGSYLKEELKRSFQNLDYILEHSKLLDRGMVGNLKLGYVGSAMQHIIPNLLLKFKKQHPK 123 Query: 126 ATIKLRNWDYDS-LDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 L+ D + ++ + E+D+ F L + P + ++ + C+ L Sbjct: 124 ILFNLKEMDNQAQVEGLLSNEIDLAF----------VRLENFPRGLKANIVLREPFCLVL 173 Query: 185 RKDHPALHQTW-NLDTFLRYPHISICWEQSDTWA--LDNVLQELGRERTIAMSLPEFEQS 241 ++HP + +L F I S ++ + + + G + I+ + Sbjct: 174 PENHPIGTHNFKSLAQFKNESFILFDQRYSPSYFYKVMQLFDDSGFQPKISHNTIHSNTI 233 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 + + ++ P + + F + +++W++ N+ N Sbjct: 234 YKLVE--NYFGISIIPNSLKTDINQK--------VKFIDLNYLPHRTKLSVVWNQ-NNRN 282 Query: 302 PKIVWLRETI 311 P + + E I Sbjct: 283 PALQNILELI 292 >UniRef50_A0K8T5 Transcriptional regulator, LysR family n=55 Tax=Proteobacteria RepID=A0K8T5_BURCH Length = 308 Score = 128 bits (324), Expect = 2e-28, Method: Composition-based stats. Identities = 43/275 (15%), Positives = 92/275 (33%), Gaps = 20/275 (7%) Query: 6 TTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPT 65 T++L L + +E +AAKR+ ++ A+S + K LF + ++ T Sbjct: 7 DTVELRQLRYFVAVAEELHFGRAAKRLFISQPALSFDIRKFEDALGVQLFSRTNKTVALT 66 Query: 66 PLMVSMEQNLAEWMQMSNLLLD-KPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYP 124 + + ++ + + + ++ L ++ YP Sbjct: 67 NAGEVLLGEARRLLLQADEAERLTVRSASGLAGRLRIGFVHSMLYRGLPDAVRRFEADYP 126 Query: 125 QATIKLRNWDYDS-LDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVW 183 + L + + + AI RG++D+G P ++ ++++ Sbjct: 127 GVEVVLSEMNTHAQVQAIQRGQIDLG----------YAHWGHFPPEVESVAVYAEPFVCC 176 Query: 184 LRKDHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQE---LGRERTIAMSLPEFE 239 L HP + L T P I + D ++ + G I ++ Sbjct: 177 LPAAHPLARRRQVALATLATEPFILF-PRDAAPHYHDLIIAQCVNAGFSPLIRHEARLWQ 235 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVAL 274 L M + +A PR Q + +L + L Sbjct: 236 TILSMIEF--GMGIALVPRVLQQ-AKSDRLAFLPL 267 >UniRef50_C6PMR8 Transcriptional regulator, LysR family n=1 Tax=Clostridium carboxidivorans P7 RepID=C6PMR8_9CLOT Length = 297 Score = 128 bits (324), Expect = 2e-28, Method: Composition-based stats. Identities = 45/306 (14%), Positives = 106/306 (34%), Gaps = 24/306 (7%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 +I T L + L + +S +KAA+ ++++ S++SK ++KL LF + + Sbjct: 1 MNIDT-----LKYVLALAEYQSYSKAAEEMHISQSSLSKQISKLEGELGVKLFDRTTRHI 55 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGL-KFELAAESPLMMIMLNALSKQIYQ 121 T ++ A+ + + + + + L +L + Sbjct: 56 CLTVAGSEFLRHAAKILNDIDEAEKAMQEYCIIQRGELVIGTIPVICYFGLASLIVSFQK 115 Query: 122 RYPQATIKLRNWDYDSLDAITRG-EVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 +YP +KL+ + L + + ++D F P + +D Sbjct: 116 KYPGIKLKLKEAETKLLIQLRKNLKIDAAFVTFTDDTELNSTFELFP-------IITDHI 168 Query: 181 CVWLRKDHPALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFE 239 + + HP ++ + +S+ T N ++ G I + Sbjct: 169 VLVTPQFHPLAAYKSVDFKDIANEKFVSMTNNSLATEIFINACKKAGFTPDIVYESDHID 228 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 + + + L T+ + + + + + + +V L +K+ + L K N+ Sbjct: 229 MIVGFVSGGLGVSLLTS-QIAKKFTKGNNIKIVNL--------NEKINITIALAIPKENN 279 Query: 300 HNPKIV 305 P I Sbjct: 280 LTPGIR 285 >UniRef50_B9K1U5 Transcriptional regulator LysR family n=59 Tax=Alphaproteobacteria RepID=B9K1U5_AGRVS Length = 332 Score = 128 bits (324), Expect = 2e-28, Method: Composition-based stats. Identities = 31/188 (16%), Positives = 58/188 (30%), Gaps = 14/188 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 LD + L ++ S TKAA R+ T SAVS + +L LF+ G T Sbjct: 20 LDTDQLQTFIAIVDTGSFTKAAGRVFKTQSAVSMQMRRLEERIGKQLFIKDGRGNRLTAE 79 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQAT 127 + ++ N + + + + + +P Sbjct: 80 GEKLLNYARRIVR-LNSEAIAAFDDNRLEGTLRIGTPDDYADRYMPEIIGRFAKTHPNVE 138 Query: 128 IKLR-NWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRK 186 + + D + + RGE+DI R +++ ++ C Sbjct: 139 LYIVCEPSSDLAEKMARGELDIALVTHNPATRQSDVMR------------TEPLCWVASA 186 Query: 187 DHPALHQT 194 +HP Sbjct: 187 NHPLRDDA 194 >UniRef50_B1J8H5 Transcriptional regulator, LysR family n=5 Tax=Pseudomonas RepID=B1J8H5_PSEPW Length = 323 Score = 128 bits (324), Expect = 2e-28, Method: Composition-based stats. Identities = 50/300 (16%), Positives = 103/300 (34%), Gaps = 22/300 (7%) Query: 11 NLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVS 70 LL + +E KAA R+++ +S+++ +L LF+ + G+ T ++ Sbjct: 5 RLLRQFIAVAEELHFHKAAIRLHMAQPPLSQAINRLEEKLGFSLFLRNKRGVKLTAAGMA 64 Query: 71 MEQNLAEWMQMSNLLLDKPHHQTPR-GLKFEL-AAESPLMMIMLNALSKQIYQRYPQATI 128 + ++ ++ + + K + A +LN L K+ + YP + Sbjct: 65 FLETAYRTLKELEQGIEYARNVSEGICGKLTITAISIAYYESLLNTL-KKFREIYPNVRL 123 Query: 129 KLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKD 187 +R A+ GE DIGF L P I+ +L ++ + L + Sbjct: 124 TIREMPSASQAKALMAGEADIGF---------MRKLPMPPDTIESRLLLNEQIVMALPAN 174 Query: 188 HPALHQTW-NLDTFLRYPHISI--CWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 H HQ +L F + L + + G + + + + Sbjct: 175 HAKAHQPMVDLRDFAEEDFVFTPQALGSGYHSQLIALCESAGFYPKVVQEAAQIHTLIGL 234 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 A +A P Y ++ P+ Q + + W+ +N +P + Sbjct: 235 VAC--GFGVALVPESIAYSTLRERVQFR--PIR-PIKDQPTPTMGLYMNWNTQN-ASPAL 288 >UniRef50_A9BVL3 Transcriptional regulator, LysR family n=3 Tax=Comamonadaceae RepID=A9BVL3_DELAS Length = 299 Score = 128 bits (324), Expect = 2e-28, Method: Composition-based stats. Identities = 38/317 (11%), Positives = 93/317 (29%), Gaps = 26/317 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L +L +E ++AA+R++++ +S ++ +L LF + + T Sbjct: 1 MELRQLRYFLVLAEELHFSRAAQRLSISQPPLSVAIRQLEEELGAQLFERTSKEVRLTAA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHH-QTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + M+ + + + L + L + R+P Sbjct: 61 GKHLRVQAQDIMEQAQRVRQDMRAIADGVQGRIRLGFVGSAIYRGLPEALESFRARHPLV 120 Query: 127 TIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 I + + + + + + +D+G + + L S+ L Sbjct: 121 RIDMLELNSAEQIAGLQQERLDLGL----------LHATRPAPGLQSHTLVSEPFMACLP 170 Query: 186 KDHPALHQT-WNLDTFLRYPHISICW--EQSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 H Q + + + + Q G + + + L Sbjct: 171 AGHALAGQRTLQVRQLAGERMVLFSRQVSPDYHQQIWQICQSEGFTPDLHHEVRHWLSVL 230 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 M + ++ P Q L F Q + + +WH P Sbjct: 231 SMV--SLDQGVSLVPSCLQRVGF--------PGLAFVPIQGRHPQSQMQAMWHP-GHVQP 279 Query: 303 KIVWLRETIKNLYASMA 319 + L +++ + Sbjct: 280 LVESLLAHLRDSVRRLG 296 >UniRef50_Q12CT6 Transcriptional regulator, LysR family n=1 Tax=Polaromonas sp. JS666 RepID=Q12CT6_POLSJ Length = 304 Score = 128 bits (323), Expect = 2e-28, Method: Composition-based stats. Identities = 53/288 (18%), Positives = 105/288 (36%), Gaps = 21/288 (7%) Query: 8 LDLNLL----LCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLS 63 + L+LL + + SVT+AA++++V SAVS+ + KL LF G++ Sbjct: 1 MSLSLLGTATRYFLEVARTGSVTQAAEQLHVAVSAVSRQITKLEGSLGCALFERQARGMA 60 Query: 64 PTPLMVSMEQNLAEWMQMSNLLLDKPHHQ-TPRGLKFELAAESPLMMIMLNALSKQIYQR 122 + + + M + ++D+ R + LA L + + Sbjct: 61 LSAAGERLAAYVRTTMLDAERVVDEVKGLGGQRASRIRLACTEGLACGFMAEVMSSFRTA 120 Query: 123 YPQATIKLRNWDYDSLDA-ITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPC 181 +P I L+ D + + RGEVD+G + + ++ + I Sbjct: 121 HPGCGIHLQVGTPDEVSRHLLRGEVDLGIKFSVAPEKGLKIEHNQSAPI----------M 170 Query: 182 VWLRKDHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQ 240 V H + ++ +R+P + LD G +A + Sbjct: 171 VLAAPGHALARRRSVSVADIVRHPLAVPEAGTTVRQMLDLCCSLKGLHYQVAY-TGNYPT 229 Query: 241 SLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEV 288 L + Q + + T + + LVA+P+ + +Q+ L+V Sbjct: 230 LLALVMQGE---VLTLSALVSAAHAVRAGELVAVPVSEPQFRQRSLQV 274 >UniRef50_C8W2B6 Transcriptional regulator, LysR family n=1 Tax=Desulfotomaculum acetoxidans DSM 771 RepID=C8W2B6_DESAS Length = 291 Score = 128 bits (323), Expect = 2e-28, Method: Composition-based stats. Identities = 42/258 (16%), Positives = 86/258 (33%), Gaps = 17/258 (6%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 +T + N L + + S +KA + +N++ AVS+ ++ L LF + Sbjct: 1 MTDIIFNYLRVFHSVARHLSYSKAGEELNLSQPAVSRQISSLEKGLGLDLFTQRGRKVVL 60 Query: 65 TPLMVSMEQNLAEWMQMSNLLLDKPHHQ-TPRGLKFELAAESPLMMIMLNALSKQIYQRY 123 T S+ M ++ + L L +L ++ K+ Y R+ Sbjct: 61 TDAGRSLYDYADRIMGLAQQAGRTLAQYHDLERGEVRLGVSPVLGCYLLPSILKEFYTRF 120 Query: 124 PQATIKLR-NWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCV 182 P + L+ + + I G++D+ I E D + Sbjct: 121 PNIKVSLQLDSGQKLIKRIEDGKLDLALVVGPLE----------SDRIHLERYTQDALVL 170 Query: 183 WLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 P + F+ YP I+ S +++ L + + M +P+ E Sbjct: 171 VCP---PGEDSPMFNEIFINYPLITREKPSSTRITIEDHLAKYDIRPKLIMEIPDNEVIK 227 Query: 243 FMAAQPDNLLLATAPRYC 260 + + +A P+ Sbjct: 228 RLVIT--GIGVAFLPKRA 243 >UniRef50_Q0S8J9 Transcriptional regulator, LysR family protein n=5 Tax=Actinomycetales RepID=Q0S8J9_RHOSR Length = 298 Score = 128 bits (323), Expect = 2e-28, Method: Composition-based stats. Identities = 42/311 (13%), Positives = 105/311 (33%), Gaps = 29/311 (9%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++++ + + +E +AA+R++ +S+++ +L LF + + T Sbjct: 1 MEISQITAFLAVAEELHFGRAAQRLHSAQPPLSRTIRQLEKQLGATLFERNTRNVRLTSA 60 Query: 68 MVSMEQNLAEWMQMSNLL-LDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 ++ E + L + + + + +++ +K + +P Sbjct: 61 GEALLGPAREILDACRLAEIAVAAAGRGQVGRVRIGFAGVSSHLLIGRWAKLVRHTHPGI 120 Query: 127 T--IKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 + + ++L+ + G +DIG P I V+ ++ V L Sbjct: 121 EFVLDSSAFASEALNKLLDGTLDIGLVRWIFT----------PPGIASRVILNEDFVVAL 170 Query: 185 RKDHPALH-QTWNLDTFLRYPHISI--CWEQSDTWALDNVLQELGRERTIAMSLPEFEQS 241 DHP ++ P +++ + +L + G I S P+ Sbjct: 171 PTDHPLAGRDGVRIEELSTEPWVTLPADPGSALRDSLQRAAHDAGFTPRIVQSAPDSMAL 230 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 + + + + T + ++ +V LPL + + W R + Sbjct: 231 MALVSA-EVGCALTVSSVAE---NVNNPDVVFLPL-----VGGPSTLQLRIAW--RADDD 279 Query: 302 PKIVWLRETIK 312 LRE ++ Sbjct: 280 --NAALREVLR 288 >UniRef50_Q76CA8 Putative LysR-type regulator n=1 Tax=Bordetella sp. 10d RepID=Q76CA8_9BORD Length = 350 Score = 128 bits (323), Expect = 2e-28, Method: Composition-based stats. Identities = 39/246 (15%), Positives = 78/246 (31%), Gaps = 15/246 (6%) Query: 10 LNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMV 69 LNL L Q R ++ A+ V+ AVS +L L LF G TP Sbjct: 91 LNLFLLF---AQYRHMSAVARHAGVSQPAVSMALRDLDLTIGQALFEPVSDGFRLTPAGE 147 Query: 70 SMEQNLAEWMQMSNLLLDKPHHQTPRGL-KFELAAESPLMMIMLNALSKQIYQRYPQATI 128 + +++ + L + ++ + + A +L + +++P+ + Sbjct: 148 ILIRHVKRALVQLRLAGAEIAYEQGSPRGRLLVGALPYGGATILAPAVAGLLRQHPRLRV 207 Query: 129 KLRNWD-YDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKD 187 ++ D + G++D+ + + E LF D + R Sbjct: 208 NIQEGSFSHLADRLAAGDLDMVVGALQPTDAY--------PELLSEPLFDDPIVIVARAG 259 Query: 188 HPALHQ-TWNLDTFLRYPHISICWEQSDTWALDNVLQELGR-ERTIAMSLPEFEQSLFMA 245 HP + L R + AL L E G + + + Sbjct: 260 HPLAGKRRATLADTARENWVLPIEGAPTRRALSAALAERGLAAPQVVVESSNPSTISSLL 319 Query: 246 AQPDNL 251 + + + Sbjct: 320 QESNWV 325 Score = 53.9 bits (129), Expect = 7e-06, Method: Composition-based stats. Identities = 19/158 (12%), Positives = 45/158 (28%), Gaps = 16/158 (10%) Query: 27 KAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSMEQNLAEWMQMSNLLL 86 KAA ++ + S VS+++ +L PLF G T + + + + + Sbjct: 3 KAADALHRSHSVVSRAVDELEKALAVPLFERQARGARLTVYGDILRRRVEQAFAEMQAVR 62 Query: 87 DKPHHQTPRGL---------KFELAAESPLMMIMLNALSKQIYQRYPQATIKLRNWDYDS 137 P +A + ++ + + A + Sbjct: 63 TALWQLAPASGVHYANAPIYTLSIAESRLNLFLLFAQ-YRHMSAVARHAGV------SQP 115 Query: 138 LDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVL 175 ++ ++D+ P S + I + Sbjct: 116 AVSMALRDLDLTIGQALFEPVSDGFRLTPAGEILIRHV 153 >UniRef50_Q7W5Y3 LysR-type transcriptional regulator n=3 Tax=Bordetella RepID=Q7W5Y3_BORPA Length = 329 Score = 128 bits (323), Expect = 2e-28, Method: Composition-based stats. Identities = 45/302 (14%), Positives = 107/302 (35%), Gaps = 19/302 (6%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 + + + L L+L++Q S+ KAA+ ++++ A S+ L ++ + F LF G+ P Sbjct: 9 LGHIRIKHLRLLELVVQYGSLRKAAEGLHLSEPAASQMLREVESTFGVTLFERGRRGMRP 68 Query: 65 TPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGL-KFELAAESPLMMIMLNALSKQIYQRY 123 P + + ++ + + R +L A + ++ +++ Sbjct: 69 NPFADVLVGRVRVILRELHEMQADVAELEHRQGVSIDLGALPRCLHTLVPTTLVRLFGAG 128 Query: 124 PQATIKLRN-WDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCV 182 ++ +++ LDA+ +G +DI + D VL+ + + Sbjct: 129 FRSRVRIAEGTSRQLLDALDQGAIDIAVTRLLESHAGLAGAR----NFDSAVLYEEAIAI 184 Query: 183 WLRKDHPALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQS 241 DHP T LD +Y + ++ G + + + Sbjct: 185 VCSTDHPLSAVDTVTLDMLTQYDWVLPPSTSITGKLIEEEFVSAGLRPPVP-KVEWLTSA 243 Query: 242 --LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 L + + + L + A Q +L ++ + P +++W +R Sbjct: 244 SRLTLVQKSNFLGICPA-SVAAELQQGGRLHVLPVNPRVPLP-------PISVVW-RRTK 294 Query: 300 HN 301 + Sbjct: 295 GD 296 >UniRef50_B5EPL1 Transcriptional regulator, LysR family n=2 Tax=Acidithiobacillus ferrooxidans RepID=B5EPL1_ACIF5 Length = 298 Score = 128 bits (323), Expect = 2e-28, Method: Composition-based stats. Identities = 43/251 (17%), Positives = 91/251 (36%), Gaps = 29/251 (11%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +D LL L + + SV++AA R+ A+S+ L KL +PL+V G+ TP+ Sbjct: 3 MDAEQLLTLLAVAEAGSVSEAALRLGRGQPAISERLHKLTREIGEPLYVREGGGIHLTPV 62 Query: 68 MVSMEQNLAEW---MQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYP 124 ++ ++ + +Q LL + + +A+ S + +L + + P Sbjct: 63 GQALIPDIRQLRAKLQDIENLLMRQKSLQA--GELRIASTSLIANYLLPPYLQSFQSQNP 120 Query: 125 QATIKLRN----WDYDSLDAIT----RGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLF 176 + +++ W +L + GE+DI LP + + + Sbjct: 121 GVNLYIKSGVTYWGDINLSELDVFFFEGEMDI---------------PHLPDSYEIQPWL 165 Query: 177 SDVPCVWLRKDHPALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSL 235 + + K HP +L+ +P + L+ ++ + + Sbjct: 166 TGEIVAVMPKTHPLASVSVLSLEDIQPFPVVWREPSSGVRRRLEKAFRQKNIVPAHFIEV 225 Query: 236 PEFEQSLFMAA 246 + E M Sbjct: 226 SDVESVGAMVK 236 >UniRef50_B7RS97 Transcriptional regulator, LysR family n=1 Tax=Roseobacter sp. GAI101 RepID=B7RS97_9RHOB Length = 302 Score = 128 bits (323), Expect = 2e-28, Method: Composition-based stats. Identities = 44/274 (16%), Positives = 86/274 (31%), Gaps = 17/274 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 + N L + + S+ A++R+ + A+++S+ +L LF+ G+ TP+ Sbjct: 1 MKFNQLRDFVAVAEAGSLRAASRRLELAQPAITRSIQELENSLGAQLFIRGARGVRLTPV 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHH-QTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + ++ ++ Q + M +L + + +RYP+ Sbjct: 61 GMVFLVRARNVLEEVRRAGEEVSQIQGSAEGNLVVGLSIAGHMGVLERVLRPFIRRYPRV 120 Query: 127 TIKLRN-WDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + + + + G VD + +D LF + V R Sbjct: 121 RLHVIEGFLPTLESELLAGTVDFFIGPVSEDI--------VTPELDVSKLFDNERLVIAR 172 Query: 186 KDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGR-ERTIAMSLPEFEQSLFM 244 +DHP +L ++ L V E G + L Sbjct: 173 RDHPRSASR-SLSDLNDVDWLTTSITHDAKDELSAVFAEHGLPPPRLIAKCQSALSILTF 231 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPF 278 D +LA PR + L + P P Sbjct: 232 LMSTD--MLAMVPRQWVESPLMKDLLI---PFPL 260 >UniRef50_C6B9B6 Transcriptional regulator, LysR family n=1 Tax=Rhizobium leguminosarum bv. trifolii WSM1325 RepID=C6B9B6_RHILS Length = 295 Score = 128 bits (323), Expect = 2e-28, Method: Composition-based stats. Identities = 41/268 (15%), Positives = 80/268 (29%), Gaps = 15/268 (5%) Query: 10 LNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMV 69 L L C + LM ++T+AA+ + ++ AVS ++A L LFV L PTP Sbjct: 3 LRQLECFRALMLHGTMTRAAEMLRMSQPAVSTTIAALEHSIGLTLFVRRGSRLHPTPEAQ 62 Query: 70 SMEQNLAEWMQMSNLLLDKPHHQTPRGL-KFELAAESPLMMIMLNALSKQIYQRYPQATI 128 ++ + + A + + +L L P + Sbjct: 63 LFYVEASKALDAIEGTAQAAREIRSGRRGSLSIVAYPNVSISLLPRLMSSFAADRPDLQL 122 Query: 129 KLRNWDYDSLDAI-TRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKD 187 K+ ++ + + DI S ++ I + +FS L K Sbjct: 123 KIITRPSQAVKELISTNTFDIAISELPTNYP-----------ISHMEVFSFDCVCMLPKG 171 Query: 188 HPALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAA 246 HP T P +++ + ++ + + + A Sbjct: 172 HPLCRFDTLTPRELDGIPFVTLFKGDPLYLSTAAAFSKMNAAWNVVVETEFLTSACEFVA 231 Query: 247 QPDNLLLATAPRYCQYYNQLHQLPLVAL 274 + L P + +L Sbjct: 232 SGHGVGL-IDPVISAAFTDKVELRPFEP 258 >UniRef50_Q483I4 Transcriptional regulator, LysR family n=1 Tax=Colwellia psychrerythraea 34H RepID=Q483I4_COLP3 Length = 302 Score = 128 bits (323), Expect = 2e-28, Method: Composition-based stats. Identities = 45/272 (16%), Positives = 93/272 (34%), Gaps = 17/272 (6%) Query: 10 LNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSP-LGLSPTPLM 68 L L + +VT+A++ + ++ A+S ++++L + L + G+S TP Sbjct: 6 LKQLRYFVAVADSGNVTEASENLFISQPAISNAISQLEETLNTQLLIRHHAKGVSLTPAG 65 Query: 69 VSMEQNLAEWMQMSNLL-LDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQAT 127 M + + + + H T + + L I L + YP Sbjct: 66 EEMVSHCRNLLSHAEEINAQMTQHSTLISGTINVGCYASLGPIYAPKLIQGFTTLYPDIN 125 Query: 128 IKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRK 186 KL + + + +A+ G++++ ++ I+ L P V L Sbjct: 126 FKLFEGNIEEINEALISGKIEMALMYDLNNNGQ----------IESTELAKISPHVLLSI 175 Query: 187 DHPALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMA 245 HP + NL T P I + S ++ ++ + I E + Sbjct: 176 KHPLAKRKKINLMTLQDEPLILLDLPNSSK-YFQSLFEQYDKHPFIKHRTKSIEMLRSLV 234 Query: 246 AQPDNLLLATAPRYCQYYNQLHQLPLVALPLP 277 A + A + L+++PL Sbjct: 235 ANGEGY--ALMNAKVKSTTCFDGSELISVPLA 264 >UniRef50_C5BE75 HTH-type transcriptional regulator PecT n=26 Tax=Enterobacteriaceae RepID=C5BE75_EDWI9 Length = 333 Score = 128 bits (323), Expect = 3e-28, Method: Composition-based stats. Identities = 47/246 (19%), Positives = 86/246 (34%), Gaps = 23/246 (9%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 + I L+L+LL +++ S AA+ ++ T SA+S+ + +L + LFV S G Sbjct: 33 RPIPNLELDLLRTFIAVVEGNSFAAAAESVHRTQSAISQQMQRLESLIGKELFVRSGRGK 92 Query: 63 SPTPLMVSMEQNLAEWMQM-SNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQ 121 S T V M + + L + + + +L L + + Sbjct: 93 SLTEHGVKMLGYARRILNLNDEACLSLMY--DDVDGVLRIGSPDDTANTILPELLARFSK 150 Query: 122 RYPQATIKL-RNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 YP+ I++ ++A+ E+D+ S E S +L S P + + Sbjct: 151 AYPRLIIEIVVKRSPFLMEALKNDEIDMAISTTECTDYSGFILRSSPSLWFCGLNYK--- 207 Query: 181 CVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQ 240 D P P +S+ + N L+ G IA + Sbjct: 208 ---FDADTPL-------------PLVSLDEPSTYRNMAINHLERFGIPWRIAYTATTLSG 251 Query: 241 SLFMAA 246 + A Sbjct: 252 ARAAVA 257 >UniRef50_B2T4S2 Transcriptional regulator, LysR family n=18 Tax=Proteobacteria RepID=B2T4S2_BURPP Length = 329 Score = 128 bits (323), Expect = 3e-28, Method: Composition-based stats. Identities = 49/315 (15%), Positives = 95/315 (30%), Gaps = 21/315 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +DL + L ++ SVT+AAKR+N+ A+S +AKL LF + G++PT Sbjct: 1 MDLRQIQYFIALFEDGSVTRAAKRLNIVQPALSMQIAKLEDELHQQLFERNAHGMAPTAA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTP-RGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 M + M+ + + + + + +L + RYP Sbjct: 61 GRLMYRLFLPIMRDLAHARQQLVQRDEVVTGHVSIGLIASVTESVLADALSRFNARYPHV 120 Query: 127 TIKLRN-WDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + + + + +D + G++D + S + + L + + Sbjct: 121 EVTVADGYSATFIDWVAGGQLDAALINKPRARLSLDA----------QPLLDEEMVLVTS 170 Query: 186 KDH-PALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 +H P L L + LD Q + + + Sbjct: 171 AEHGPELPHAIELAQLPELELVLPTKRHGLRGVLDTAAQHEDVLLAPRFEIDVLSTIVKL 230 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 PR L A P+ + + V H R + Sbjct: 231 VETTH--FATILPRIAVQRAVHLG-SLRAYPILAPRIVRHIVCVS-----HPRRPLSAAA 282 Query: 305 VWLRETIKNLYASMA 319 L I + ++ Sbjct: 283 DALVSIIADELRKVS 297 >UniRef50_UPI0001BCF0E5 transcriptional regulator n=1 Tax=Selenomonas noxia ATCC 43541 RepID=UPI0001BCF0E5 Length = 303 Score = 128 bits (323), Expect = 3e-28, Method: Composition-based stats. Identities = 51/315 (16%), Positives = 106/315 (33%), Gaps = 24/315 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L Q++ R T+AA+ ++VT A+S+S++KL D LF S + T Sbjct: 1 MELAQLKYFQVMANIRHFTRAARMLDVTQPALSRSMSKLEKDLDVRLFKRSDGEIELTQE 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQT-PRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + + ++ + + +F+L+ L +L + + YP Sbjct: 61 GARLLRRVDRILREVESAKREASNLQVGSSTEFKLSFIHSLGSYILPHILRDFQAIYPDI 120 Query: 127 TIKLRNWDYDSLDA-ITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 I L D ++ + GE D+ L+S+ V + Sbjct: 121 QIHLNQQDSTAMPQVLAAGESDLCLCSALPMTEHSAWAY----------LWSEELFVAVP 170 Query: 186 KDHPALHQ-TWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 HP + + NL I++ S +D G I + + Sbjct: 171 LGHPFADRVSINLHELEYESFIALKNNYSLRILVDQFFDLAGIHPEITFEGGDISTLSGL 230 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 L ++ P L +P+ F ++ + W+ + P Sbjct: 231 V--SAGLGISILP----KPTGFEHPELRYIPISFPLCKR-----ALGVAWNTQRQLPPAA 279 Query: 305 VWLRETIKNLYASMA 319 V ++ + + ++ Sbjct: 280 VNFQQFLIRRFDDVS 294 >UniRef50_C7I2X4 Transcriptional regulator, LysR family n=1 Tax=Thiomonas intermedia K12 RepID=C7I2X4_THIIN Length = 313 Score = 128 bits (323), Expect = 3e-28, Method: Composition-based stats. Identities = 38/253 (15%), Positives = 81/253 (32%), Gaps = 14/253 (5%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +DL L + +ER T+AA+R++V+ +S+ + L PLF G+ T Sbjct: 1 MDLRHLRYFVAVAEERHFTRAAQRLHVSQPPLSQQIQALETELGVPLFTRGRGGVQRTAA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQ-TPRGLKFELAAESPLMMI-MLNALSKQIYQRYPQ 125 ++ + + + + + + ++ L + +PQ Sbjct: 61 GDALLPLARSILDAVEHAVAQTRQVGRGETGRLAVGFAGSMPFTDVMPRLLRDFRAAWPQ 120 Query: 126 ATIKLRNWDYDS-LDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 + LR S +D + +D+GF + V+ + L Sbjct: 121 VALDLREQPSQSQIDDLLAHRLDLGFIRTTQLMH--------DPRLSTLVVQREPLLAAL 172 Query: 185 RKDHPA-LHQTWNLDTFLRYPHISI--CWEQSDTWALDNVLQELGRERTIAMSLPEFEQS 241 DHP + L+ P + + + G IA + E Sbjct: 173 HADHPLAARASLRLNDLRDQPFVIYSASLGAGLRQQTLALCAQAGFNPHIAQEVHEMPTL 232 Query: 242 LFMAAQPDNLLLA 254 + + + + + Sbjct: 233 IGLISAGLGVGIV 245 >UniRef50_A6TWD6 Transcriptional regulator, LysR family n=1 Tax=Alkaliphilus metalliredigens QYMF RepID=A6TWD6_ALKMQ Length = 305 Score = 128 bits (323), Expect = 3e-28, Method: Composition-based stats. Identities = 50/298 (16%), Positives = 109/298 (36%), Gaps = 23/298 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +D+ L + + + T+AAK + V SAVS+ +A L + LF + + T Sbjct: 1 MDIRQLRYFIAVAEHLNFTEAAKHLFVAQSAVSQQIADLENKIEVKLFDRNKRSVKLTHA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + + + + + K ++ L L + + Y Sbjct: 61 GGVLLKEAIDIVSRAEEAVIKTQEAELGIIGSLKIGFLGYTEKNFLPFLIRGFRRNYQNI 120 Query: 127 TIKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 ++L +++ L D+++ GE+DIGF+ ++ LF++ + + Sbjct: 121 DLQLDQYNHGILIDSLSTGELDIGFTLSFGLDNIG--------GLEKRSLFTEPISIVMH 172 Query: 186 KDHPALHQ-TWNLDTFLRYPHISICWEQSDTWALDNVL--QELGRERTIAMSLPEFEQSL 242 DHP HQ + NL + I++ +S +L G I L Sbjct: 173 CDHPLAHQSSINLGDLAQERFIALNRHESPQGFNQTLLICANKGFSPNIVSGPKLLHTVL 232 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 + + +A P+ +++ + L F + + + ++ + W N + Sbjct: 233 LLVDA--EMGIAILPKSLEHHA--------SPSLRFIDIEGEAVQHELVVAWKTSNQN 280 >UniRef50_Q0FTS9 Transcriptional regulatory protein n=1 Tax=Roseovarius sp. HTCC2601 RepID=Q0FTS9_9RHOB Length = 308 Score = 128 bits (323), Expect = 3e-28, Method: Composition-based stats. Identities = 41/273 (15%), Positives = 92/273 (33%), Gaps = 17/273 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +D L +++ S+T AA+R+N+ A+S+ + L L G+ PT Sbjct: 1 MDFRQLRNFIQVVELNSITAAAERLNIAQPALSRQVKALEEELSVSLLRRHGRGVMPTEE 60 Query: 68 MVSMEQNLAEWMQMSNLLLDK-PHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + + ++ L H P L + I+ L ++ Q YP+ Sbjct: 61 GIRLARRAKAILEEMEDLAGDISGHSAPLSGTVTLGLPPTVSEILATHLIERTMQDYPEV 120 Query: 127 TIKLRN-WDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 +++ + + D + RG++D+G + +I + + + + Sbjct: 121 KLRIISGFSGHVQDWLLRGKIDLGVAYE----------GQKSPSIKAQPIIMEQLFLIQS 170 Query: 186 KDHPALHQ--TWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 + + L P I E ++ + E + + + + L Sbjct: 171 ANTEGARDGVPIHARDALEQPLILPNPEHGLRGRVEAIAHEDRIDLNVVLEIDILPTMLA 230 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPL 276 + L P ++ L+A P+ Sbjct: 231 FVER--GLGATILPLVSVIHHVREG-RLIARPI 260 >UniRef50_Q21B31 Transcriptional regulator, LysR family n=2 Tax=Alphaproteobacteria RepID=Q21B31_RHOPB Length = 364 Score = 128 bits (322), Expect = 3e-28, Method: Composition-based stats. Identities = 43/272 (15%), Positives = 80/272 (29%), Gaps = 16/272 (5%) Query: 10 LNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMV 69 + L + T AA+ +NV+ ++ + +L LF + TP Sbjct: 7 FRQVRAFLALARHLKFTSAAQELNVSQPTLTVQINQLEQQLGIRLFDRDKRRVELTPAGR 66 Query: 70 SMEQNLAEWMQMSNLLLDKPHHQTPRGL-KFELAAESPLMMIMLNALSKQIYQRYPQATI 128 ++ + + +L T +AA + L K ++ P I Sbjct: 67 NILPLMERLSLNMDEVLLAASDLTYAKRGIIRVAALPSVAASFLPRGIKDFREQNPGIII 126 Query: 129 KLRN-WDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKD 187 + + + + + EVD G S +I + SD C + + Sbjct: 127 DVWDVVGEEIIKLVKAEEVDFGIGTHF----------SADKSIKVQDYLSDSLCAFFPVE 176 Query: 188 HPA--LHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMA 245 HP + P + S + + G E I M +L MA Sbjct: 177 HPLNTAASVVYVRDVASCPLVVTRKNSSVRVLFERSMAREGCELNIVMETNYMSTALSMA 236 Query: 246 AQPDNLLLATAPRYCQYYNQLHQLPLVALPLP 277 + +A P + L + P Sbjct: 237 RA--GVGVAILPSTAVEAGNMAGLSFKPIDPP 266 >UniRef50_Q2G7Q5 Transcriptional regulator, LysR family n=1 Tax=Novosphingobium aromaticivorans DSM 12444 RepID=Q2G7Q5_NOVAD Length = 318 Score = 128 bits (322), Expect = 3e-28, Method: Composition-based stats. Identities = 33/274 (12%), Positives = 85/274 (31%), Gaps = 13/274 (4%) Query: 7 TLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTP 66 D L + S+ +AA+ +N+T ++S+ + + LF G++ T Sbjct: 22 DFDERQLRAFIAIADTGSLGRAARVVNLTQPSLSRLVQGIEERLGHRLFDRGGKGMALTD 81 Query: 67 LMVSMEQNLAEWMQMSNLLLDKPHHQTPRGL-KFELAAESPLMMIMLNALSKQIYQRYPQ 125 + + + D+ + A + ++ ++ + + P Sbjct: 82 AGRLLLPHARHLVAEMQNTRDELAALRGLRRGTVRIGAVAAVLRTLVASAIGSVLVETPD 141 Query: 126 ATIKLRN-WDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 +L D + LDA+ +D+ S + + + D V+ Sbjct: 142 LAFELVEGVDGELLDALLTRRIDLAVSSQPLDHDEVVPIGECT--------YRDSFAVFC 193 Query: 185 RKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 H + L + + + + +++ + + E + + Sbjct: 194 AASHTLPPRP-TLAQAMTRGWVMPGHAFTPRGTFEEIVRRHSLTPRVVVECGSVEAMIAV 252 Query: 245 AAQPDNLLLATAPRYCQYYN--QLHQLPLVALPL 276 +A + L P + + +L + L L Sbjct: 253 SASSELLCWLPEPLLAPHLASGAMRKLDIAELAL 286 >UniRef50_C0CT29 Putative uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0CT29_9CLOT Length = 304 Score = 128 bits (322), Expect = 3e-28, Method: Composition-based stats. Identities = 46/279 (16%), Positives = 95/279 (34%), Gaps = 38/279 (13%) Query: 13 LLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSME 72 L + + +E+S++KAA+++ VT A+S L +L + PLF+ GL PT Sbjct: 6 LEYILAIAKEKSISKAAEKLYVTQPALSLFLTRLESQLGTPLFIRGASGLIPTFAGE--- 62 Query: 73 QNLAEWMQMSNLLLDKPHHQTP--------RGLKFELAAESPLMMIMLNALSKQIYQRYP 124 ++QMS +L + ++ + + +L + + YP Sbjct: 63 ----RYIQMSQKVLKDYRDFEQELCDISSLHMGRLKVGTSAHIGSYVLPQVIPLFNRTYP 118 Query: 125 QATIKLRNWDYDSLDAITRG-EVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVW 183 + + + L+ + G E+D+ L + +Y + + + Sbjct: 119 NIEVSISEGNSQVLEHMISGNELDVAL----------MHLPLKHIEANYVEIARERYVMA 168 Query: 184 LRKDHPALHQT----------WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAM 233 KDHP + + + Q D +L++ G I + Sbjct: 169 FSKDHPLNRKLSPREGETYPYIDPRAAAGQKFVLSFPYQRVRQISDRILEKAGITPDIIL 228 Query: 234 SLPEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLV 272 + + +L A L + P + P+ Sbjct: 229 TTSSVQTALRFAGV--GLGVTFLPESYIQLFRCTHEPVF 265 >UniRef50_A9KQ85 Transcriptional regulator, LysR family n=9 Tax=Bacteria RepID=A9KQ85_CLOPH Length = 301 Score = 128 bits (322), Expect = 3e-28, Method: Composition-based stats. Identities = 45/304 (14%), Positives = 106/304 (34%), Gaps = 22/304 (7%) Query: 14 LCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSMEQ 73 + +E S++ AAKR+ ++ AVS+++ +L + + LF+ G+ T + Q Sbjct: 10 KIFYYVAKEGSISLAAKRVCISQPAVSQAIKQLESVLNCQLFIRVAKGMRLTKEGEVLYQ 69 Query: 74 NLAEWMQMS---NLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQATIKL 130 + E ++ L++ + + + A + L ++ + +YP+ + + Sbjct: 70 CVREGYELIVKGEERLERMLNLE--SGEIRIGASDMTLQYYLLPYLEEFHIQYPKIKVTV 127 Query: 131 RN-WDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHP 189 N ++L + G++D G + + D+ R D+ Sbjct: 128 TNGPTPETLALLKDGQIDFGIVSEPFSLSEDYSVFKVKE-------IKDIFVAGKRFDY- 179 Query: 190 ALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQPD 249 QT + + P I + + S +D L G + L + + A + Sbjct: 180 LRDQTMDYEELAGLPVICLENDTSTRRYVDEYLSSHGVVLSPEFELATSDMIVQFAKRSL 239 Query: 250 NLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWLRE 309 + L + + +L F ++ ++R + + L Sbjct: 240 GIGLV-VEDFATELMKQGEL------FEVRLKTH-IPSRHFCVVENQRFALSTASRKLLA 291 Query: 310 TIKN 313 +K Sbjct: 292 LLKE 295 >UniRef50_A5W561 Transcriptional regulator, LysR family n=12 Tax=Proteobacteria RepID=A5W561_PSEP1 Length = 317 Score = 128 bits (322), Expect = 3e-28, Method: Composition-based stats. Identities = 50/242 (20%), Positives = 88/242 (36%), Gaps = 14/242 (5%) Query: 10 LNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSP-LGLSPTPLM 68 L L ++ SV +A++++ + ++S ++ L F LF+ G+S TP Sbjct: 22 LRQLKYFVTTVEAGSVAEASRQLYIAQPSISTAIKSLEESFGVQLFIRHHAQGVSLTPSG 81 Query: 69 VSMEQNLAEWMQMSNLLLDKP-HHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQAT 127 +QM++ + ++ + + L L QRYP Sbjct: 82 KRFYAKTKSLLQMAHEFEQNALADNDTVAGQIDIGCFETVAPLYLPRLIAGFRQRYPGVD 141 Query: 128 IKLRN-WDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRK 186 I+LR+ D + +T G D+ F + E +P P V L + Sbjct: 142 IRLRDGEQQDLIQGLTAGTFDLAFLYDHDLDGTIEAEPLMPPQ---------KPYVLLPE 192 Query: 187 DHPALHQ-TWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMA 245 +H Q +L P I + S T+ + ++ E+G I S P E M Sbjct: 193 NHRFAGQAQVSLRDLCPEPMILLDVAPSRTYFV-SLFNEMGLAPNIVFSSPSIEMVRGMV 251 Query: 246 AQ 247 Q Sbjct: 252 GQ 253 >UniRef50_C3KNJ1 Putative transcriptional regulator, LysR-type n=1 Tax=Rhizobium sp. NGR234 RepID=C3KNJ1_RHISN Length = 303 Score = 128 bits (322), Expect = 3e-28, Method: Composition-based stats. Identities = 45/257 (17%), Positives = 91/257 (35%), Gaps = 14/257 (5%) Query: 10 LNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMV 69 L + + S+ AA R+NV+ A+SK++ +L PL+ S G PT Sbjct: 4 LRHIKAFLAVADTGSIRTAALRLNVSQPALSKTIQELEEILSAPLYTRSAHGSMPTEFGR 63 Query: 70 SMEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNALSKQIYQRYPQATI 128 + + ++ K + + M+M + ++ +++ P + Sbjct: 64 AFLHRARIIDTEFSRAQEEISQMVGAKGGKVAVGLSAIASMLMASQALERFWKKNPNVNV 123 Query: 129 KLRN-WDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKD 187 ++ + + + +GE D G SSL + E LF + +R Sbjct: 124 RISDGLLDRLVGGVRQGEFDFAVGGVPP--------SSLGHDLTIEPLFENRIVPVVRVG 175 Query: 188 HPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGR-ERTIAMSLPEFEQSLFMAA 246 HP +L R + + + ++ + G + ++ F L + Sbjct: 176 HPLADAR-SLKDLARANWLYTNDQPAFMALMNQHFVDHGVPPPRVLLTCESFSAVLDILP 234 Query: 247 QPDNLLLATAPRYCQYY 263 D L+A PR C + Sbjct: 235 STD--LVAALPRSCLTH 249 >UniRef50_B2JUD8 Transcriptional regulator, LysR family n=12 Tax=Burkholderia RepID=B2JUD8_BURP8 Length = 298 Score = 128 bits (322), Expect = 3e-28, Method: Composition-based stats. Identities = 39/245 (15%), Positives = 83/245 (33%), Gaps = 15/245 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L + + +ER+VT+AA+R+ + +S+ + L LF + G+ T Sbjct: 1 MELRHIRYFLAVAEERNVTRAAERLGIGQPPLSQQIHALEDELGVRLFRRTGHGVVLTEA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMM-IMLNALSKQIYQRYPQ 125 S + + + L ++ +F + +++ L + Q YP Sbjct: 61 GESFAADAKRILHDTRLAVENAQSAGRGEIGQFNIGFTGSAAFNPVVSKLIRAYRQAYPN 120 Query: 126 ATIKLRNWD-YDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 T+ L + L + VD+ F L S P + + + + + L Sbjct: 121 VTLTLAEGNTAQLLAYLDDDRVDVAF---------VRLGSQSPAGVQFHHIAIEPMKIVL 171 Query: 185 RKDHPALHQT-WNLDTFLRYPHISICW--EQSDTWALDNVLQELGRERTIAMSLPEFEQS 241 H + L P + + + + +E G E P+ Sbjct: 172 PATHRLAKKRKIALSALAEDPFVMLPREASPTLHDVIVGACREAGFEPIAGQQAPQLSSV 231 Query: 242 LFMAA 246 + + A Sbjct: 232 VNLVA 236 >UniRef50_D1PCH2 Transcriptional regulator, LysR family n=10 Tax=Bacteroidales RepID=D1PCH2_9BACT Length = 297 Score = 128 bits (322), Expect = 3e-28, Method: Composition-based stats. Identities = 38/258 (14%), Positives = 79/258 (30%), Gaps = 26/258 (10%) Query: 13 LLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSME 72 L + + S TKAA + ++ A+SK + +L + LF + T M Sbjct: 6 LKVFRSVATLLSFTKAANELFISQPAISKHIQELEKEYGVQLFDRIGNRIQLTRAGQLML 65 Query: 73 QNLAEWMQMSNLLLDKPHHQTP------RGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + + L G + + A + + +L L + + YP Sbjct: 66 DHACKIIDAYQNL-----DFDMKKLTEKSGGELRIGASTTISQYVLPELIAEFRKLYPDI 120 Query: 127 TIKLRNWDYDSLDA-ITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + L + + ++ + G +D+G Y D ++ Sbjct: 121 RLTLLSGNSHEIEDALAAGRIDLGMVEGIKRQ----------PTFKYTPFMKDELVAFVH 170 Query: 186 KDHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRE---RTIAMSLPEFEQS 241 +P +L+ + P + + LQE G I M+L E Sbjct: 171 CSNPLAQQDEISLNLLRQTPIVLRELGSGTLDVIQKALQENGIALSDLNIEMNLGTTEGI 230 Query: 242 LFMAAQPDNLLLATAPRY 259 ++ + + Sbjct: 231 KHFVEHSLSMGIISIRAI 248 >UniRef50_Q1GX89 Transcriptional regulator, LysR family n=13 Tax=Proteobacteria RepID=Q1GX89_METFK Length = 330 Score = 128 bits (322), Expect = 3e-28, Method: Composition-based stats. Identities = 42/317 (13%), Positives = 99/317 (31%), Gaps = 28/317 (8%) Query: 6 TTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPT 65 + L+ L + + +ER+ +AA++ V+ A+S ++ KL +F S ++ T Sbjct: 27 DNMTLSELKFIVAVAKERNFRRAAEKCFVSQPALSLAVKKLEEELGVTIFERSHRDVATT 86 Query: 66 PLMVSMEQNLAEWMQMSNLLLDKPH-HQTPRGLKFELAAESPLMMIMLNALSKQIYQRYP 124 P+ + ++ S+ + + F+L +L + + + P Sbjct: 87 PIGEQIIAQAIRTLEESDRIKEIARMGNNQLAGPFKLGVIYSTGPYLLPEIIPALRRLAP 146 Query: 125 QATIKL-RNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVW 183 + +++ N + + +D + E L+ + V Sbjct: 147 EMPLEVEENLTANLETQLRNRVIDAAIIALPFDV----------PGVRCEPLYDESFVVA 196 Query: 184 LRKDHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERT-IAMSLPEFEQS 241 + HP + + + + + + VL R + E Sbjct: 197 VPDIHPWAERKEIRAEELADEKVLLLNSGHCFSNQV--VLACPELSRHGEVLQGNSLETI 254 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 M A NL + P + L + +P ++ L W K + Sbjct: 255 RNMVAS--NLGITVLPCSAAAGRYQNPL-IRTIPFADPVPTRR-----IALAWRKGYTRE 306 Query: 302 PKIVWLRETIKNLYASM 318 I + + ++ Sbjct: 307 KAI----DCLLQAIRAL 319 >UniRef50_A8FJ94 Possible LysR family transcriptional regulator n=2 Tax=Bacillus pumilus RepID=A8FJ94_BACP2 Length = 290 Score = 128 bits (322), Expect = 3e-28, Method: Composition-based stats. Identities = 45/250 (18%), Positives = 95/250 (38%), Gaps = 19/250 (7%) Query: 14 LCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSMEQ 73 +++ S TKA +++ +T S VS ++AKL + L + GL+ T + Sbjct: 10 KVFLTVVECGSFTKAGEKLGLTQSGVSHNIAKLESELGVVLLRRNRNGLALTDAGERVMP 69 Query: 74 NLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNALSKQIYQRYPQATIKLRN 132 ++ + + ++LL + ++ S ML L ++YP ++L Sbjct: 70 HIRQIIHHASLLEQEAALIQGMEVGSIKIGTFSSFSSKMLPQLIHLFTKKYPNIQVELYE 129 Query: 133 WDYDSLDA-ITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPA- 190 Y+ ++ I G +D+GF L+ + LF D V +++DH Sbjct: 130 GGYEEIEEWIASGTIDVGF------------LTQPSREFETIPLFQDELVVLMQEDHRFN 177 Query: 191 LHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQPDN 250 + +D+ I + + +L+E G + + + + + M + Sbjct: 178 TKKVIEVDSLHDESFIM--PKAGCDLLIKKLLKERGVKPHVLFEIGDNNTLISMVQE--G 233 Query: 251 LLLATAPRYC 260 L + P Sbjct: 234 LGVTIIPTLI 243 >UniRef50_A8FAL6 LysR family transcriptional regulator n=10 Tax=Bacillus RepID=A8FAL6_BACP2 Length = 298 Score = 128 bits (322), Expect = 3e-28, Method: Composition-based stats. Identities = 42/256 (16%), Positives = 91/256 (35%), Gaps = 18/256 (7%) Query: 19 LMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSP-LGLSPTPLMVSMEQNLAE 77 +++ S T AA+ +N+T SAVS ++A L +D LF+ G+ T + ++ ++ E Sbjct: 12 VVELGSFTAAAEALNMTQSAVSHAVASLETEWDVSLFIRDRKKGIMLTDIGQTLLPHIRE 71 Query: 78 WMQMSNLLLDKPH-HQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQATIKLRNWD-Y 135 + + + + + + +L L +++P+ K Sbjct: 72 VLNRLEKIQQEIALTKNIETGLIRIGTFASASACLLPKLLVSYQKKHPKIEFKFYEGTYE 131 Query: 136 DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPALHQTW 195 + L+ + G +D+GF + + +LL L D V +H Q+ Sbjct: 132 EILEWLDSGIIDVGFVVKGYADEAFDLLP----------LIKDEMVVAYHPNHRFHQQSI 181 Query: 196 -NLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQPDNLLLA 254 ++ P I ++++ E + + + M + L + Sbjct: 182 VDITDLADEPFIM--PTGMYQSHVEDIFAEAQLKPATLFEVHDCTTIARMV--GEGLGVT 237 Query: 255 TAPRYCQYYNQLHQLP 270 P QL + Sbjct: 238 IGPELFLKTQQLVHIR 253 >UniRef50_A1B7R5 Transcriptional regulator, LysR family n=10 Tax=Rhodobacteraceae RepID=A1B7R5_PARDP Length = 330 Score = 128 bits (322), Expect = 3e-28, Method: Composition-based stats. Identities = 34/238 (14%), Positives = 82/238 (34%), Gaps = 14/238 (5%) Query: 6 TTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPT 65 + L + ++++ ++ +AA+ + +T A+S+++A+L L S G++ T Sbjct: 3 RRIRLRHVQAFVEIVRQGNLKRAAEALYLTQPAISRTIAELEEIVGARLMTRSRRGVALT 62 Query: 66 PLMVSMEQNLAEWMQMSNLLLDK-PHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYP 124 + + L L + A ++ ++ + ++ Q P Sbjct: 63 AQGEFFHGYALNALSALSQGLAGISGEVQAAELSLRVGALPSVLARLMPEVVAELQQTAP 122 Query: 125 QATIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVW 183 + + + + + + ++D+ R + + L+ + V Sbjct: 123 HLRLSIADGGHGHLMGLLRSDDLDVVIG--------RLGAPETMQGLSFTQLYLEDVAVV 174 Query: 184 LRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGR---ERTIAMSLPEF 238 +R HP L +L YP I + ++ +L G R I F Sbjct: 175 VRPGHPILSDP-DLRRIGDYPVIYPTETAAIHPFVERLLIAHGILRPARRIETVSDAF 231 >UniRef50_B9P823 Predicted protein n=7 Tax=cellular organisms RepID=B9P823_POPTR Length = 487 Score = 128 bits (322), Expect = 3e-28, Method: Composition-based stats. Identities = 49/279 (17%), Positives = 99/279 (35%), Gaps = 19/279 (6%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 + + L L +M+E ++ +AA R ++ PSA S+ LA+L + LF S G Sbjct: 16 MKLDPISLRL---FVAVMEESAIARAAAREHIAPSAASRRLAELESQLQVELFTRSNRGS 72 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQ-TPRGLKFELAAESPLMMIMLNALSKQIYQ 121 PT ++ + + + ++ + + A + L + ++ Sbjct: 73 VPTAAAYALLNMARGVLNDLDGIGEQMREYGSGLRGHVRVMANISAITQFLPSQLQRFLD 132 Query: 122 RYPQATIKLRN-WDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 ++P ++L+ D A+ E DIG S I D Sbjct: 133 QHPHVDVRLQERVSSDIARAVADNEADIGI----------LNQGSYGEKIRLRPYRRDRL 182 Query: 181 CVWLRKDHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFE 239 V + + H + ++ L L + + + + + +LG + + M + ++ Sbjct: 183 IVIVPQGHALVWRRSLRLAQVLDHDLVGMHAGSALNHQITRAAADLGLQPRLRMKVTGYD 242 Query: 240 QSLFMAAQPDNLLLATAPR-YCQYYNQLHQLPLVALPLP 277 M A L + P + Y L +AL P Sbjct: 243 ALCLMVAS--GLGVGILPEGSARLYLGALPLRCIALDEP 279 >UniRef50_Q1AVK2 Transcriptional regulator, LysR family n=1 Tax=Rubrobacter xylanophilus DSM 9941 RepID=Q1AVK2_RUBXD Length = 311 Score = 128 bits (322), Expect = 3e-28, Method: Composition-based stats. Identities = 45/239 (18%), Positives = 79/239 (33%), Gaps = 12/239 (5%) Query: 10 LNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMV 69 L L ++E S++ AA+R+ + +VS+ LA+L PL V S G+ PT Sbjct: 3 LRFLEAFCAAVEEGSISGAARRMYLAQPSVSERLAELEREARVPLLVRSRRGVEPTEQGR 62 Query: 70 SMEQNLAEWMQMSNLLLDKPHHQT-PRGLKFELAAESPLMMIMLNALSKQIYQRYPQATI 128 + + + + + R + +AA S L + A + +R+P Sbjct: 63 LLYERARRVLDEVERVEEVLRSLRVRREARLYVAASSTLGEHLFPAWLRGFRERHPGVIP 122 Query: 129 K-LRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKD 187 + + + + RG V G E + L D V +R Sbjct: 123 EVFVGNTKEVVALVGRGTVAFGVIEGGEVRGPLESVP----------LLEDELVVVVRPG 172 Query: 188 HPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAA 246 HP + R P IS ++ + + G + M L Sbjct: 173 HPWARRGVRPQELSREPFISREKGSGTREVVERAISDRGLSLDVRMELGSTSAIKEAIE 231 >UniRef50_Q3SGH4 Oxidative stress transcriptional regulator n=2 Tax=Proteobacteria RepID=Q3SGH4_THIDA Length = 301 Score = 128 bits (322), Expect = 3e-28, Method: Composition-based stats. Identities = 49/290 (16%), Positives = 85/290 (29%), Gaps = 24/290 (8%) Query: 13 LLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSME 72 L L L +AA+ +T S +S + KL + LF S ++PTP+ + Sbjct: 6 LRYLVALADHGHFGRAAEACFITQSTLSTQIKKLEDFLGVTLFDRSLKRVTPTPIGREIL 65 Query: 73 QNLAEWMQMSNLLLD-KPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQATIKLR 131 Q + + + H Q P L L L +++++P + LR Sbjct: 66 QAARTIVDEAERIRTLAKHAQDPMTRTVHLGVIPTLGPYYLPHALTLVHRKHPGLRLLLR 125 Query: 132 -NWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPA 190 L+ + G++D G L + E LF + L DH Sbjct: 126 EEMTPQILEHLADGKLDAGL----------LALPVTDEGLRVEPLFHEPFYAALPADHAL 175 Query: 191 -LHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRER--TIAMSLPEFEQSLFMAAQ 247 + ++ + + + + L G + E M Sbjct: 176 AAREALSVADIMAEKLLLL---DEGHCLREQALDVCGARSSGREEVRATSLETLRQMVGM 232 Query: 248 PDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKR 297 L L P LV + L+W +R Sbjct: 233 --GLGLTLLPALAVDAAPRQTRKLVE----IRPFRSPPPGRTIGLVWRRR 276 >UniRef50_B9X9V4 Transcriptional regulator, LysR family n=1 Tax=bacterium Ellin514 RepID=B9X9V4_9BACT Length = 296 Score = 128 bits (322), Expect = 3e-28, Method: Composition-based stats. Identities = 48/296 (16%), Positives = 105/296 (35%), Gaps = 27/296 (9%) Query: 10 LNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMV 69 + C + +E ++AAKR++++ +SK + +L LF+ + + T Sbjct: 3 FRQIECFLAVAEELHFSRAAKRLHLSQPPLSKHIRQLEQELGVQLFIRNRRSVVQTEAGR 62 Query: 70 SMEQNLAEWMQMSNLL-LDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQATI 128 ++ + + L Q + + ++ S L + L + +R+P + Sbjct: 63 IYQEKVRNVLYQLEEAKLAAQRAQAGQTGELKIGFLSALFYDFIPPLLMRFRRRFPDVQV 122 Query: 129 KLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKD 187 L +A++ G+VD+ F G I +L D + Sbjct: 123 TLLEMVAAKQFEAVSDGKVDVAFPGLPPDKPGL--------EISSRILRKDKWYACFHSE 174 Query: 188 HPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVL----QELGRERTIAMSLPEFEQSL 242 HP Q L+ R + I +++ + ALD+ L +++ +A + + L Sbjct: 175 HPLAQQEKVWLEEVRRESFVFI--QRAVSPALDDALLEMFRQVNYTPRVAQTASRAQSLL 232 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRN 298 + A + ++ P L F + K +++W+ N Sbjct: 233 SLIAA--GVGISIFPGAVSALPSAG--------LVFRPLKDKLAPYEHSIIWNGSN 278 >UniRef50_Q1J2L5 Transcriptional regulator, LysR family n=2 Tax=Deinococci RepID=Q1J2L5_DEIGD Length = 299 Score = 128 bits (322), Expect = 3e-28, Method: Composition-based stats. Identities = 49/280 (17%), Positives = 88/280 (31%), Gaps = 15/280 (5%) Query: 12 LLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSM 71 LL + + S++ AA+ + +T AVS L L +PLF G+ T + Sbjct: 6 HLLTFARVARLGSLSAAAEELYLTQPAVSHQLKLLTHAVGEPLFRRHRTGVHLTAAGEGL 65 Query: 72 EQNLAEWMQMSNLLLDKPHHQTPRGL-KFELAAESPLMMIMLNALSKQIYQRYPQATIKL 130 + + +AA S + +L + + +YP+ T ++ Sbjct: 66 LPHAQALARALEGAQHYVQELRGLERGVLSVAASSTIAAALLPRVLTAFHSQYPEVTFQV 125 Query: 131 RNWD-YDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHP 189 R + + LDA+ G+V++ P L + D + + HP Sbjct: 126 RQGNTREVLDALQSGQVELALIEGPPGP--------LGPHLQARAFGEDELILVIAPTHP 177 Query: 190 ALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQPD 249 L P + + L G + + LP E Sbjct: 178 LAQAG--LQGVATLPLVWREHGSGTREVAEQALAGAGLQTRTVLELPGTEAVKEAVMG-- 233 Query: 250 NLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVP 289 L A P + L L L L ++ ++V Sbjct: 234 GLGAAFLPERRVHREVQAGL-LTRLELTLPGLRRPLIQVT 272 >UniRef50_C5BAY1 Transcriptional regulator, LysR family n=2 Tax=Edwardsiella RepID=C5BAY1_EDWI9 Length = 334 Score = 128 bits (322), Expect = 3e-28, Method: Composition-based stats. Identities = 63/315 (20%), Positives = 120/315 (38%), Gaps = 36/315 (11%) Query: 13 LLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSME 72 L+ L L +E+SV +AA+ + ++ ++SK L +LR F+DPL+ + TP+ ++ Sbjct: 32 LIALTALNEEQSVGRAAECLGISQPSMSKLLMELRKEFNDPLYTKCNNLFTLTPVGETLC 91 Query: 73 QNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQATIKLRN 132 + + S ++D+ ++ + + ++AL + YP I R Sbjct: 92 TIVRNTLYASQSMIDQLRC--GVKHRYNICLPHWFNIQEVSALIGNVRTLYPNLVINFRP 149 Query: 133 WD----YDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDH 188 D + ++ +G VD+ R + P I + L S R+ H Sbjct: 150 PSATTAEDIVQSLKQGNVDVAV---------RHFPHACPSGIHLKTLGSSEFMFL-RRVH 199 Query: 189 PALHQT-----WNLDTFLRYPHISICWEQSDTWALDNVLQELGRE---RTIAMS-LPEFE 239 Q + L P I D+ LQ + I M+ F Sbjct: 200 AIGQQPTQVLTMTREQLLCTPLILYNISPYLQ---DSFLQANRLDEGLLNITMTLTNNFR 256 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 + L D LL+ T + + + V +P + P+ L+WH+R+S Sbjct: 257 RWLDELVDHDTLLI-TLRSIGETLLESGEYRAVTIP-------GMAIHFPYHLMWHERSS 308 Query: 300 HNPKIVWLRETIKNL 314 +P +R+ + + Sbjct: 309 QDPVHHLIRKALIAM 323 >UniRef50_Q31IK2 Transcriptional regulator, LysR family n=2 Tax=Piscirickettsiaceae RepID=Q31IK2_THICR Length = 314 Score = 128 bits (322), Expect = 3e-28, Method: Composition-based stats. Identities = 40/230 (17%), Positives = 81/230 (35%), Gaps = 17/230 (7%) Query: 10 LNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMV 69 L L + + + S +KAA+ +++T VS + KL + PLF T Sbjct: 14 LRQLQVFESIARHNSFSKAAEELHLTQPTVSMQVKKLAEILESPLFEQIGRKAHLTEAGK 73 Query: 70 SMEQNLAEWMQMS---NLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 ++ + +Q ++ + +KF + + + + + Q YP Sbjct: 74 ALYDSANNILQQLSIAEQKINHLKGFSGGSVKFTVIST---AQYFVPKVIQNFTQSYPDV 130 Query: 127 TIKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 TI +R + +SL + I + D G+ L ++ L + Sbjct: 131 TIIMRVGNKESLIERINNNKDDFYLLGQPPE----------DLNVESSQLSVNPLAFLAN 180 Query: 186 KDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSL 235 DHP + + ++ + P + ++ V E + I M L Sbjct: 181 SDHPLVGKQLSIQDLVNEPFLMRETGSGIRAQIEKVFGEFEFQPNIKMVL 230 >UniRef50_C0ZC24 Transcriptional regulator n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZC24_BREBN Length = 288 Score = 128 bits (322), Expect = 3e-28, Method: Composition-based stats. Identities = 53/304 (17%), Positives = 95/304 (31%), Gaps = 26/304 (8%) Query: 13 LLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSME 72 L + + S+ +AA+ + + S ++ L +L LFV + G+S T + Sbjct: 6 LEVFLTIARHGSINRAAQALFLAQSTLTHRLKQLERQVGGALFVRTASGVSLTGEGRRLL 65 Query: 73 QNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQATIKLRN 132 ++ + + + A + L L + +P T +R+ Sbjct: 66 PVATSIVEQMRSFIQEKEQ----RQSMNIVAGKAFVAYELPRLIGEYRIAHPGFTCYVRS 121 Query: 133 -WDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPAL 191 +SL A+ G DI F G E + I E L SD + + HP Sbjct: 122 TLYEESLSALLTGTADIAFLGSEMY----------HPHIHQEFLPSDRLLLVMAPSHPWA 171 Query: 192 HQTWNLDTFLRYPHISI-CWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQPDN 250 + I +D L + G I M L F M + Sbjct: 172 SGFPGFQAWGTEEMIVFGNHTAPYRQRIDRYLAQQGVFPNIIMELDSFNAVKKMVER--Q 229 Query: 251 LLLATAP-RYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWLRE 309 L + P R Q +L + +D + + + H + + + Sbjct: 230 LGITILPERTIQQELATGRL------VAYDIANGELVRPTLIAYLHPKKEDDAFQQ-FVQ 282 Query: 310 TIKN 313 IK Sbjct: 283 WIKE 286 >UniRef50_B8DKE3 Transcriptional regulator, LysR family n=1 Tax=Desulfovibrio vulgaris str. 'Miyazaki F' RepID=B8DKE3_DESVM Length = 307 Score = 128 bits (322), Expect = 3e-28, Method: Composition-based stats. Identities = 48/318 (15%), Positives = 85/318 (26%), Gaps = 21/318 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +D+ L + S KAA+ ++ PS V+ + L PLF + + T Sbjct: 1 MDIRHLKTFLAVAAGLSFRKAAESLHYAPSTVTAQIRALEEDLGAPLFERTGRRVLLTDH 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQAT 127 + +M++ H + + L M+ L ++ R+P Sbjct: 61 GRRLLPRARRIAEMADDARRAVTH-DADSGELSVRMSQSLGMLCLPEALRRFRVRFPATR 119 Query: 128 IKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRK 186 + + L + GEVD+ +D E L + Sbjct: 120 VHVATASRHGLAADLRHGEVDLAL---------LLGRPFAADGVDMETLRHEPLACIAAP 170 Query: 187 DHPALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMA 245 P P + S A++ L + + Sbjct: 171 GSPLAGHGRVTPADLAGQPLVLTRHVWSLRPAIEQTLAAAHVQPGSVLECSSIVIVKRCV 230 Query: 246 AQPDNLLLATAPRYCQY-------YNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRN 298 A L +A P L LV P L VP L R Sbjct: 231 AA--GLGVAVVPLCAVRDEVDRGELRALDAAALVDAPRTDAPGIHTPLSVPVLLALPARR 288 Query: 299 SHNPKIVWLRETIKNLYA 316 + +++L+ Sbjct: 289 QVPAAAAFFAGILRDLFR 306 >UniRef50_A5WGC3 Transcriptional regulator, LysR family n=4 Tax=Moraxellaceae RepID=A5WGC3_PSYWF Length = 309 Score = 128 bits (322), Expect = 3e-28, Method: Composition-based stats. Identities = 40/214 (18%), Positives = 84/214 (39%), Gaps = 13/214 (6%) Query: 24 SVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLS-PTPLMVSMEQNLAEWMQMS 82 ++++AA+ ++ + S++SK ++ L +FV L+ TP+ ++ ++ Sbjct: 31 NLSQAAQVLHTSQSSLSKHISALENQLKAEVFVRQGKRLTGLTPVGEALLPHIEAIFTEI 90 Query: 83 NLLLDKPHHQ-TPRGLKFELAAESPLMMIMLNALSKQIYQRYPQATIKLRNWDYDSL-DA 140 + + P+ LA +L + KQ Q++P+ + L+ D ++ + Sbjct: 91 RTIENISLDYNNPQTGTLTLATTHTQARYVLPDIIKQFKQQFPKVQLVLQQADPQTIANM 150 Query: 141 ITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPALH-QTWNLDT 199 + RG+ DIG + S V + KDH + +L T Sbjct: 151 VIRGQADIGIATEALLQNSYLRCYRYYDWSHR---------VIVPKDHELAELDSIDLPT 201 Query: 200 FLRYPHISICWEQSDTWALDNVLQELGRERTIAM 233 YP ++ + A+D + G E I + Sbjct: 202 LASYPLVTYHGGFTGRGAIDKTFHDAGLEPEIVL 235 >UniRef50_D0XXF4 Transcriptional regulator, LysR family n=1 Tax=Caulobacter segnis ATCC 21756 RepID=D0XXF4_9CAUL Length = 300 Score = 128 bits (322), Expect = 3e-28, Method: Composition-based stats. Identities = 44/273 (16%), Positives = 89/273 (32%), Gaps = 19/273 (6%) Query: 7 TLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTP 66 L+L L + M S T AA R+ ++ AVS+ +A+L LF L+PTP Sbjct: 2 KLNLRSLEAFRETMLSGSATAAAARMGLSQPAVSRLIAQLEQDAGFDLFYREKGRLAPTP 61 Query: 67 LMVSMEQNLAEW---MQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRY 123 + + + + ++ + L+ ++ A L +L + + R+ Sbjct: 62 EALIIYEEIDLAFGGLERVDNLVRDLASFN--TGALKIVAPPSLSEGVLPNILSRFMARF 119 Query: 124 PQATIKLRNWDYDSLD-AITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCV 182 P + + + ++ + D GF L I +L S Sbjct: 120 PNVRVSIDSRSTETARTMVANRTADCGF----------VKLPMDRTDISTVLLSSSETVC 169 Query: 183 WLRKDHPALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQS 241 L + HP + P + + + +D+ +E G + + + Sbjct: 170 VLPETHPLAAHAELSPQLLRGEPLVLLGYGTRTRRQIDDAFRECGVRPEVKLETHTVGSA 229 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVAL 274 AA L +A + + + Sbjct: 230 CAFAAA--GLGVAIVNALLATNYRKPGITMRVF 260 >UniRef50_Q7WNR8 LysR-family transcriptional regulator n=3 Tax=Bordetella RepID=Q7WNR8_BORBR Length = 337 Score = 127 bits (321), Expect = 4e-28, Method: Composition-based stats. Identities = 47/301 (15%), Positives = 97/301 (32%), Gaps = 23/301 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 L+L L L ++QE +T+AA+R+ ++ A S L L F PLF +P G+ PT Sbjct: 31 LNLTHLRTLVAVVQEGHLTRAAERLRISQPAASHHLRSLEQQFGLPLFTRTPRGVVPTAA 90 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQT-PRGLKFELAAE-SPLMMIMLNALSKQIYQRYPQ 125 + + + A + S LL + + P + L +L K ++ YP Sbjct: 91 GLQLSEQAARLLASSLELLSTASELRGSASGRIAIGTIEDPSVHAALPSLVKWFHEHYPL 150 Query: 126 ATIKLRNWDYDSLDA-ITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 + + + + S+ I GE+ + + + + V Sbjct: 151 IELSIESRNSSSVRQGILTGEI----------NAGFYVSCTNEANLREYEIGQRELVVVA 200 Query: 185 RKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 + T + P + + + + + A+ + M Sbjct: 201 PQSWRERVATATWPELAKLPWVMTTTGSAHSEITAQLFRSHNITIRPALEVNTERLLRAM 260 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 +Q L T + + + + +P+ + + +P I Sbjct: 261 VSQGVGLGF-TRREFAE--AEQARGAFFIVPISV-------HRTTMHFAYARSAETDPLI 310 Query: 305 V 305 Sbjct: 311 Q 311 >UniRef50_B2Q0Q6 Putative uncharacterized protein n=1 Tax=Providencia stuartii ATCC 25827 RepID=B2Q0Q6_PROST Length = 295 Score = 127 bits (321), Expect = 4e-28, Method: Composition-based stats. Identities = 44/272 (16%), Positives = 89/272 (32%), Gaps = 19/272 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +D+ L ++Q ++AA+R+ VT A+S+S+ KL L V G+ T Sbjct: 1 MDIRSLRYFVEVVQLNGFSRAAERLFVTQPAISRSIQKLEQELGYTLLVRENDGVRLTDE 60 Query: 68 MVSMEQNLAEWM---QMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYP 124 + + + + N L + P + + + +RYP Sbjct: 61 GEILLSHAKQILKQFNSMNKALKEKEG--PLSGILNVGLPPVIASTYFADIIMAFSRRYP 118 Query: 125 QATIKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVW 183 Q +K+ ++A+ GEV + +L D V SD + Sbjct: 119 QVELKILELGTHKMMEAMLNGEV----------ETAAVMLPFDNELFDLHVFSSDRLMLL 168 Query: 184 LRKDHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 + + HP + + P I + + + G++ IA + Sbjct: 169 VSEQHPLAMRNSVKFAELIDEPFIFFSEDFRINELVMSACGIYGKKPVIAGRSSHLDLVT 228 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVAL 274 M + + P + L ++ + Sbjct: 229 AMVRA--GVGVTLLPDSMWNKTRADGLSIIPV 258 >UniRef50_D2MBA7 Transcriptional regulator, LysR family n=1 Tax=Rhodopseudomonas palustris DX-1 RepID=D2MBA7_RHOPA Length = 304 Score = 127 bits (321), Expect = 4e-28, Method: Composition-based stats. Identities = 51/282 (18%), Positives = 101/282 (35%), Gaps = 16/282 (5%) Query: 13 LLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSME 72 L + + S+ KAA R++V PSAVS+ +A+L D LF S +G+ TP + Sbjct: 6 LRYFNEVARLGSIRKAADRLHVAPSAVSRQIAQLEHELDAVLFERSKVGVQLTPAGEVLA 65 Query: 73 QNLAEWMQMSNLLLDKPHHQTPRGL-KFELAAESPLMMIMLNALSKQIYQRYPQATIKLR 131 + + + ++ + L L+ +L L + RYP T +++ Sbjct: 66 RQSNRIFRDLDRARNEIDDLRGLRRGEVSLFVIEGLVSGLLPDLLANFHHRYPAVTFRIQ 125 Query: 132 NWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPA 190 D ++A+ E DIG + + E+++ + + H Sbjct: 126 TGSTDRIIEALLEDEADIGITFNATPRPEIEVIAEHV----------EPIACLVAPTHEF 175 Query: 191 LHQ-TWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQPD 249 ++ + LD + + + R + ++ E + MAA Sbjct: 176 ANRVSLTLDDICTQTIALPEHSFGLRQVFERAIAKRQRTPQVLVTTNSLELTKRMAAT-- 233 Query: 250 NLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFT 291 ++A P +LH L A+P+ + + Sbjct: 234 GQVIAFMPAL-TVITELHSDALRAIPIADPAFAAARSSISIH 274 >UniRef50_C5CRH1 Transcriptional regulator, LysR family n=1 Tax=Variovorax paradoxus S110 RepID=C5CRH1_VARPS Length = 308 Score = 127 bits (321), Expect = 4e-28, Method: Composition-based stats. Identities = 48/290 (16%), Positives = 99/290 (34%), Gaps = 18/290 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 + L L L + + S T AA+ + +T A+S + ++ PL V + T Sbjct: 9 VSLQQLRALAAVAESGSFTLAAESLQLTQPAISHLVKRMEEQLGQPLIVR-GRRIQFTSA 67 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTP-RGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 M + ++M + +D Q+ R + LA +L + + Q++P Sbjct: 68 GQVMVETAVRALRMIDESVDACRSQSQLREGRVVLAVGHLTAGALLPPMLGRFSQKHPTL 127 Query: 127 TIKLRNWD-YDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 L + + I E D+GF + + E LF++ +++R Sbjct: 128 ATTLLDSTAEQMISRILSQEADLGFGSD---------IGQKHSELATEPLFTERMALFVR 178 Query: 186 KDHPALHQ-TWNLDTFLRYPHISICWEQSDTWALDNVLQEL-GRERTIAMSLPEFEQSLF 243 DHP + + P I + + + A+ L + + + + Sbjct: 179 DDHPLAQRVVVDARQLEALPFIHVNPDANVWRAVSRQLSSMANVYPRVVHHVSMLSTAFG 238 Query: 244 MAAQPDNLLLATAPRYCQYY--NQLHQLPLVALPLPFDESQQKKLEVPFT 291 + +A PRY + L + + L + + + P Sbjct: 239 LIQA--GAGVALLPRYVEVLMPGNLRAVAVTRPALEYPVVAIRLAKHPLN 286 >UniRef50_Q1QUX6 Transcriptional regulator, LysR family n=1 Tax=Chromohalobacter salexigens DSM 3043 RepID=Q1QUX6_CHRSD Length = 313 Score = 127 bits (321), Expect = 4e-28, Method: Composition-based stats. Identities = 45/247 (18%), Positives = 96/247 (38%), Gaps = 15/247 (6%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSP-LGLS 63 + L L + + SVT+AA++++V+ ++S ++ ++ LFV GLS Sbjct: 1 MRQFTLKQLRYFVVAGELLSVTQAARKLHVSQPSISAAIQQIEDISGLQLFVRHHAQGLS 60 Query: 64 PTPLMVSMEQNLAEWMQMSNLLLDKPHHQ-TPRGLKFELAAESPLMMIMLNALSKQIYQR 122 TP + + ++ + L G + L A + L L ++ R Sbjct: 61 LTPSGKQLLSRTRQLLRDAEGLEKYALSLGEEIGGELRLVAFPTFAPVFLPQLLRRFADR 120 Query: 123 YPQATIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPC 181 +P ++ + D + + +G+ ++ F+ +P ID+ L+ P Sbjct: 121 HPSVSLYCDEMNQVDIVRGLGQGDYELAFTYDL----------EVPEDIDFTPLYRFPPY 170 Query: 182 VWLRKDHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQ 240 + DHP + +L+ + YP + + W S + L ++ G +A + Sbjct: 171 AVVAADHPLSERDSVSLEELVAYPMVLLDWPLSREYFL-SIFTHHGLSPIVAHRAKSMDM 229 Query: 241 SLFMAAQ 247 + A Sbjct: 230 MRGLVAN 236 >UniRef50_C4U6X1 LysR-family transcriptional regulatory protein n=1 Tax=Yersinia aldovae ATCC 35236 RepID=C4U6X1_YERAL Length = 301 Score = 127 bits (321), Expect = 4e-28, Method: Composition-based stats. Identities = 54/321 (16%), Positives = 114/321 (35%), Gaps = 28/321 (8%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 + D NL+ LQ L++ RSVT+ A+ ++V S VS LA+LR F+D + +N+ GL P Sbjct: 1 MKKFDYNLVKLLQCLIEFRSVTRTAEELDVAISTVSHGLARLRREFNDRIVINTKEGLIP 60 Query: 65 TPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQR-- 122 T L +++ + + + + + + + ++A + + + Sbjct: 61 TTLAIALNNHFSPAADLIDNAIIAGKNSDSKQTSLTISASPLIQHWLSCQIYALSQSDDI 120 Query: 123 YPQATIKLRN---WDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 TIK + + + + EVDI + ++ ++ L S Sbjct: 121 SNNFTIKYVDSYYVNEQRVSRLRNSEVDIDIGS----------ILNIDRSLVSYHLGSFP 170 Query: 180 PCVWLRKDHPALHQTWNLDTFLRYPHIS--ICWEQSDTWALDNVLQELGRERTIAMSLPE 237 + L H + D +L+ + I + + + + Sbjct: 171 LGILLSNSHSRILGDVGKDDWLQEQRLIWNINMQGASFAPGNTFNDIHIGNNKATIETTS 230 Query: 238 FEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKR 297 ++ + A D L++ + + + + LP V HK+ Sbjct: 231 SLNAVTLVANTDYLVI-FPFMMQSFLAKQFNVRISPLPFA------NDGVVSLYAYTHKK 283 Query: 298 NSHNPKIVWLRETIKNLYASM 318 + N L + + AS+ Sbjct: 284 SDSND----LIQRCLKIIASL 300 >UniRef50_Q2RHB2 Transcriptional regulator, LysR family n=1 Tax=Moorella thermoacetica ATCC 39073 RepID=Q2RHB2_MOOTA Length = 297 Score = 127 bits (321), Expect = 4e-28, Method: Composition-based stats. Identities = 39/274 (14%), Positives = 90/274 (32%), Gaps = 36/274 (13%) Query: 11 NLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMV- 69 N LL + + +++S ++AA+ +++T A+S + L +F L + ++ T Sbjct: 4 NQLLTFKAVAEQKSFSRAARVLHLTQPAISLHIQSLEEYFGTRLLDRNNRQVTLTEAGRV 63 Query: 70 ---------SMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIY 120 + + + + + + + A + L +++ + Sbjct: 64 LYNYALELSRLYDEVKKALADISGKV---------KGNLVVGATLTIGEYFLPSIAGEFK 114 Query: 121 QRYPQATIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 ++YP I LR + + + GE+D+ ++ + E LF D Sbjct: 115 RQYPDVEITLRIANTQEIICRTLDGELDLALIEGQAK----------HPNLIQEDLFQDE 164 Query: 180 PCVWLRKDHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRE---RTIAMSL 235 + + +H + + P I + L++ G E + M L Sbjct: 165 LVLIIHPEHRWAGRREITPEELREEPLILREEGSGTRQITEAGLRKAGLELSTLKVVMEL 224 Query: 236 PEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQL 269 + L +A R + L Sbjct: 225 GSTQAIKEAVEA--GLGVAIISRLAIKKEIRYNL 256 >UniRef50_Q1N2S5 Transcriptional regulator, LysR family protein n=1 Tax=Bermanella marisrubri RepID=Q1N2S5_9GAMM Length = 307 Score = 127 bits (321), Expect = 4e-28, Method: Composition-based stats. Identities = 38/206 (18%), Positives = 67/206 (32%), Gaps = 14/206 (6%) Query: 1 MKKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPL 60 M + ++ + L Q ++T AAK++++T SA+S L L LF Sbjct: 1 MNTVLKRIETRHFRLVDALAQTNNMTLAAKQLHLTQSALSHQLKALEEALGYELFYRHGK 60 Query: 61 GLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKF-ELAAESPLMMIMLNALSKQI 119 TP + ++ + L D+ +A E L Sbjct: 61 KFVITPHGRRVLESAKVVLSELTSLQDELQAIEQDDKVVLRIATECITTFQWLPRAIPVF 120 Query: 120 YQRYPQATIKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSD 178 Q YP ++L Y+ + D + G++D+ ++ LF D Sbjct: 121 KQAYPNVEVELLPNAYNKVTDLLDSGDIDMAI-----------KMAPAKKPFINHSLFDD 169 Query: 179 VPCVWLRKDHPAL-HQTWNLDTFLRY 203 V L K+H + R Sbjct: 170 QLVVVLDKNHKLASQDIITAEDVARE 195 >UniRef50_B5JLL8 Putative uncharacterized protein n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JLL8_9BACT Length = 297 Score = 127 bits (321), Expect = 4e-28, Method: Composition-based stats. Identities = 44/276 (15%), Positives = 94/276 (34%), Gaps = 19/276 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++ N L C + +E+S T+AAK N++ ++S +AKL + LF+ P G+ + Sbjct: 1 MEFNQLKCFLAVAREQSFTRAAKACNLSQPSLSYQIAKLEEELGESLFIRKPKGVELSEP 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRG----LKFELAAESPLMMIMLNALSKQIYQRY 123 + + ++ R + + +L L K + Y Sbjct: 61 GKLLLDGAHRIREEQEKIVST---FRTREKLMAGEVRFGIIPTIAPYLLPPLMKAFRREY 117 Query: 124 PQATIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCV 182 PQ + +R + + GE++ + P ++ ++ LF + + Sbjct: 118 PQIRLIVRESRTSQLVKEVVDGELEFAVVSDIAQPLLKKY------SLHLNKLFEEELLL 171 Query: 183 WLRKDHPA-LHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQS 241 + HPA + + I + L + G + + ++ + Sbjct: 172 AVPNAHPACALPELRVQSIDESELILLSEGNCLRDQT-MQLCQRGDKLS-SLVCEQLPTQ 229 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLP 277 L M + L +A P +L + P Sbjct: 230 LAMVSG--GLGVAIVPEMAVKNASSAELTFLHFKSP 263 >UniRef50_B9JXG6 Transcriptional regulator n=1 Tax=Agrobacterium vitis S4 RepID=B9JXG6_AGRVS Length = 304 Score = 127 bits (321), Expect = 4e-28, Method: Composition-based stats. Identities = 41/240 (17%), Positives = 86/240 (35%), Gaps = 15/240 (6%) Query: 11 NLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVS 70 L + +++ SVT+A+KRI VT A S+ ++ L LF+ L+PTP ++ Sbjct: 6 RQLEAFRAMIETGSVTEASKRIGVTQPAASRLISDLEYAIGYALFLREKKRLTPTPEAMA 65 Query: 71 MEQNLAEWMQMSNLLLDKPHHQTPRGLK--FELAAESPLMMIMLNALSKQIYQRYPQATI 128 + + + L+ + +A+ + + L + + + P ++ Sbjct: 66 LFEEVDRSYIGL-GLIGDAARDIGANRRGALRIASLPAMALSFLPKVISKFCEDKPDISV 124 Query: 129 KLR-NWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKD 187 ++ + + + + D+GF+ + SL A+ + F L K Sbjct: 125 DMQIHSSQRVIQCVASQQFDLGFA----------EIDSLHPAVKSQAFFESPMVAILPKH 174 Query: 188 HPA-LHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAA 246 HP T F I++ + +D + R I + + A Sbjct: 175 HPLCRKATLTPQDFSNENFIALGSNYTMRKRIDALFLANNITRKIQIETQLSMAVANLVA 234 >UniRef50_B4ETB5 LysR-family transcriptional regulator n=7 Tax=Enterobacteriaceae RepID=B4ETB5_PROMH Length = 297 Score = 127 bits (321), Expect = 4e-28, Method: Composition-based stats. Identities = 34/255 (13%), Positives = 76/255 (29%), Gaps = 19/255 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +D+ +L ++Q ++AA + +T A+S+S+ KL L + G+ T Sbjct: 1 MDIRVLRYFIEVVQLNGFSRAADALFITQPAISRSIKKLEDELGTVLLIREVDGVKLTDD 60 Query: 68 MVSMEQNLAEWMQM---SNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYP 124 + ++ + + N L+ P + + + R+P Sbjct: 61 GAILYEHAKQILAQFNSMNKALNDKDE--PLTGALNVGLPPVIASTYFADIIMAFSSRHP 118 Query: 125 QATIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVW 183 +K+ DA+ G V + +L + + D + Sbjct: 119 NVELKIFELGTKQMEDAMLEGTV----------ETAAVMLPFNDKDFELTIFSEDHLMLL 168 Query: 184 LRKDHPALHQ-TWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 + + HP N + I + + + E I + + Sbjct: 169 VAQSHPLAKDKKVNFKQLITERFIFFSEDFRINDLVRSACGIYNTEPQIVGRSNHLDLII 228 Query: 243 FMAAQPDNLLLATAP 257 M + + P Sbjct: 229 AMVKA--GVGITLLP 241 >UniRef50_Q0K190 Transcriptional regulator, LysR-family n=1 Tax=Ralstonia eutropha H16 RepID=Q0K190_RALEH Length = 295 Score = 127 bits (321), Expect = 4e-28, Method: Composition-based stats. Identities = 40/300 (13%), Positives = 99/300 (33%), Gaps = 27/300 (9%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L LL + E + +KAA R++++ +S+ + L L V + + T Sbjct: 1 MELRQLLYFVTVADELNFSKAAVRLHMSQPPLSQQIKALEDEMGVELLVRNRREVRLTDA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + + ++ + + ++ + + +L + ++ +R+P Sbjct: 61 GRAFQADCRAVLEQVRVAVTTARRTAAGDIGTLQIGMVTSGIFHVLPTILTRMAERFPGL 120 Query: 127 TIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 I + + D A+ +G++DIG + +F++ + + Sbjct: 121 HIAVTDMGSADQAHAVMQGKLDIGIVHSIPTRS----------GLGKTPIFTEYFTIVVP 170 Query: 186 KDHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQE---LGRERTIAMSLPEFEQS 241 + H + L P ++ + D ++ G IA + + Sbjct: 171 EGHELAARPALALRDLEGVPLVAFS-REHAPALFDGMIASCLHAGFSPVIAHTARNPLTT 229 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 M L +A PR + F E Q + +W ++ + Sbjct: 230 FQMVKL--GLGVALVPRSYARAGL--------PGVVFREIGQTAGHIQLYAIWREQAPSD 279 >UniRef50_Q394I3 Transcriptional regulator, LysR family n=2 Tax=Burkholderia cepacia complex RepID=Q394I3_BURS3 Length = 343 Score = 127 bits (321), Expect = 4e-28, Method: Composition-based stats. Identities = 44/291 (15%), Positives = 99/291 (34%), Gaps = 14/291 (4%) Query: 2 KKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLG 61 +++ L + + L L + RS + A+ ++T A+SK L +L PLF + Sbjct: 35 AQALRRLRVRDMETLDTLGRTRSFARTAEAASITQPALSKWLRELEESLGLPLFERTSRR 94 Query: 62 LSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGLK-FELAAESPLMMIMLNALSKQIY 120 ++PT ++ + + + + + + + ++ + + Sbjct: 95 VAPTVYGDALLECIGRVLIDMRGVAPAFDALRTGTGRPVSIGLLPNMAPQLIPGVLAWLR 154 Query: 121 QRYPQATIKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 + + +R D L E+D+ ++ S+L +D L+ D Sbjct: 155 EAGRPVQLNVREDTLDRMLAQAQHRELDLLVCRLDA--------SALSAGLDVAPLYRDD 206 Query: 180 PCVWLRKDHPALHQ-TWNLDTFLRYPHISICWEQSDTWALDNVLQELGRE-RTIAMSLPE 237 V HP L + +P I+ A+D + G ++ M Sbjct: 207 MIVVCGPRHPLLRRARIGWRDAAAFPWIAPPLGAPARTAMDAEFAKAGLSPPSVLMESVS 266 Query: 238 FEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEV 288 ++ + +A Q L + +A + + LPL + + Sbjct: 267 WQTNRAVAEQSPCLFVQSARAF--ELAVRAGERVGRLPLKLSTMPETVGAL 315 >UniRef50_Q7WPW7 LysR family regulatory protein n=4 Tax=Bordetella RepID=Q7WPW7_BORBR Length = 297 Score = 127 bits (321), Expect = 4e-28, Method: Composition-based stats. Identities = 48/272 (17%), Positives = 90/272 (33%), Gaps = 19/272 (6%) Query: 6 TTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPT 65 + L ++L + S AA + VT ++S + +L + L + T Sbjct: 9 HNIKYRQLKAFRILAESGSFKHAADSLAVTQPSMSIMIRELESDLGVALIDRATRSAELT 68 Query: 66 PLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNALSKQIYQRYP 124 Q + + + + +A + L + +++ P Sbjct: 69 DAGRDFYQQIKGSLDQLEKAYSYANAAGKAEHGRVRIATLTSLAAEAVTTAIARMHAERP 128 Query: 125 QATIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVW 183 I+L Y + L A+ R EVD+G +L +D++ LFSD V Sbjct: 129 GIQIELMERTYFNFLLALRRREVDLGVG----------ILHEAHADLDFQYLFSDQLVVV 178 Query: 184 LRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 K HP Q L +Y + + S LQEL + + + + ++ Sbjct: 179 TPKGHPLARQRQPLKHLGKYDVVVVSPGPSL-----EALQELDADCAPPVQVEQPSTAIT 233 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALP 275 M + L + + L V +P Sbjct: 234 MVRK--GLGVTVTSSSATTGLDMRGLAAVPIP 263 >UniRef50_Q2RHG4 Transcriptional regulator, LysR family n=1 Tax=Moorella thermoacetica ATCC 39073 RepID=Q2RHG4_MOOTA Length = 302 Score = 127 bits (321), Expect = 4e-28, Method: Composition-based stats. Identities = 44/273 (16%), Positives = 88/273 (32%), Gaps = 16/273 (5%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +++N L+ +++ +++ AA+ +++T AVSK L L +F L + T Sbjct: 1 MNINHLITFITTVEKGTLSAAAEELHLTQPAVSKQLQALEDYFGLRLLERRGREVRLTAA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRGL-KFELAAESPLMMIMLNALSKQIYQRYPQA 126 ++ N + T + L A + +L L + YP+ Sbjct: 61 GEICYRHARIIASHLNQTRRELAELTQLVRGRLLLGASTTPGQYILPRLIGAFRREYPRV 120 Query: 127 TIKL-RNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + L + + + GE+D+ + Y L D + + Sbjct: 121 EVILTIADTQEVVQRLQEGEIDL---------GVVGAAGGRGKNLSYSRLAGDELVLIVP 171 Query: 186 KDHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRE---RTIAMSLPEFEQS 241 H T + P + ++ L G I M L E Sbjct: 172 PGHRLAGATAISPGELKEEPLVWRESGSGTRRVVEERLAAAGFTVDPEQIVMELGSTEAI 231 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVAL 274 + + L T+ + +L +L +V L Sbjct: 232 VSAVEAGLGISLVTS-WAVEKSVKLGRLAVVTL 263 >UniRef50_D1ULQ3 Transcriptional regulator, LysR family n=1 Tax=Burkholderia sp. CCGE1001 RepID=D1ULQ3_9BURK Length = 313 Score = 127 bits (321), Expect = 5e-28, Method: Composition-based stats. Identities = 43/288 (14%), Positives = 82/288 (28%), Gaps = 32/288 (11%) Query: 12 LLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSM 71 L+ + + ++++AA ++++ AVS L L+ F +PL+ G+ TP + Sbjct: 5 QLITFAAVAEHLNISRAALALHLSQPAVSGQLRLLQDEFGEPLYQRDGRGVRLTPAGEQL 64 Query: 72 EQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNALSKQIYQRYPQATIKL 130 Q A + A + +L L ++RYP+ + Sbjct: 65 AQYAARLRDTWRQAHAYRDALRGLEHGTLRIGATTTPASYLLPYLLADFHRRYPEVALHT 124 Query: 131 RNWD-YDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDH- 188 + + D + A+ G VDI + LP D + + H Sbjct: 125 VDGNTTDIVGAL--GSVDIALIEGPVG-------TDLPPDTAVHAWREDEIVAIMPRSHW 175 Query: 189 --------------------PALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRE 228 + +L P I ++ G Sbjct: 176 LAGAGEVGAAGGGEGGEGRQGGQASSLDLAALGAEPLIVREAGSGVRQIVERAFARAGLP 235 Query: 229 RTIAMSLPEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPL 276 +A+ + E + +A L L PL Sbjct: 236 MRVALEIAGVEGVKEAVRAGMGIGFVSAMSMRHENGALRVFSLAPQPL 283 >UniRef50_A1HNI4 Transcriptional regulator, LysR family n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HNI4_9FIRM Length = 302 Score = 127 bits (321), Expect = 5e-28, Method: Composition-based stats. Identities = 45/297 (15%), Positives = 89/297 (29%), Gaps = 32/297 (10%) Query: 13 LLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSME 72 L + +E S T AAKR+ +T VS + L F PLF+ + G+ T ++ Sbjct: 7 LSVFCAVAEEGSFTAAAKRLGLTQPTVSFHIDNLEKNFGCPLFMRTAKGVELTVYGQTLY 66 Query: 73 QNLAEWMQMSNLLLDKPHHQ-TPRGLKFELAAESPLMMIMLNALSKQIYQRYPQATIKLR 131 +N + ++ + A + +L L+ + +P + + Sbjct: 67 ENSRRVNAILEEAQNQIKALVAGTSGHIPVGASTIPGEYILPGLTAAFLRHHPGVKVSIT 126 Query: 132 NWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPAL 191 D ++ + S ++ + P + L+ D + + HPAL Sbjct: 127 TGDSQTI-----------LTAYFSGHFPIAVVGAKPDDPTAQPLWQDELVLVV---HPAL 172 Query: 192 HQTW---NLDTFLRYPHISICWEQSDTWALDNVLQELGR---ERTIAMSLPEFEQSLFMA 245 +L P I L L G +++ + Sbjct: 173 LAEIHLPDLAALANLPLILRKAPSGSRHTLLAALTASGIDVERLKVSLEVTGNAALKQAV 232 Query: 246 AQPDNLLLATAPRYCQYYNQLHQLPLVALPLP--------FDESQQKKLEVPFTLLW 294 R+ ++ L LP+P + + +L W Sbjct: 233 LH--KAGAGFLSRWAVQ-AEVATGRLAILPVPGLRITRTFYGLCNPALMPAAVSLYW 286 >UniRef50_Q8XFS3 Probable transcription regulator protein n=1 Tax=Ralstonia solanacearum RepID=Q8XFS3_RALSO Length = 306 Score = 127 bits (320), Expect = 5e-28, Method: Composition-based stats. Identities = 42/263 (15%), Positives = 80/263 (30%), Gaps = 18/263 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +DL L +L + +AA R+++ +S + L LF + + T Sbjct: 1 MDLRRLRYFVVLAETLHFGRAALRLSIAQPPLSHQIRVLEEELGARLFDRNNRRVELTAA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMI-MLNALSKQIYQRYPQ 125 +++ + + + + S + ++ L + +P Sbjct: 61 GMALLPEARALLAQAEKASTIAARVERGELGELRIGFTSAAALTQVIPRLILAYRRDWPG 120 Query: 126 ATIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 + +R + L A+ +D F LP A LF D V L Sbjct: 121 VRLSIRELTTQEQLTAMLERRLDFAF-------VRGTAAPDLPPAFGAVRLFEDAFVVAL 173 Query: 185 RKDHPAL--HQTWNLDTFLRYPHISICWEQSDTWALDNVL---QELGRERTIAMSLPEFE 239 HP + + P + +S T A + VL + G + Sbjct: 174 PPQHPCADNDGSLFVKALANEPFVMY-PPESGTGAYEQVLSLCRHAGFAPQVVQEALSAA 232 Query: 240 QSLFMAAQPDNLLLATAPRYCQY 262 + + A L +A P Q Sbjct: 233 TMVGLVAA--GLGVALVPESFQR 253 >UniRef50_D1X3G6 Transcriptional regulator, LysR family n=5 Tax=Streptomyces RepID=D1X3G6_9ACTO Length = 307 Score = 127 bits (320), Expect = 5e-28, Method: Composition-based stats. Identities = 39/246 (15%), Positives = 75/246 (30%), Gaps = 10/246 (4%) Query: 23 RSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSMEQNLAEWMQMS 82 S+T+AA R+ T A+S+ LAKL L V G T + + Sbjct: 17 GSITRAAARLGYTAPALSQQLAKLEREAGAALLVRHHRGARLTAAGELLAGRARRVLDEL 76 Query: 83 NLLLDKPHHQTP-RGLKFELAAESPLMMIMLNALSKQIYQRYPQATIKLRNWDYD-SLDA 140 + G + + + + +L + + +P+ + + +++ + A Sbjct: 77 EQARHELARLAGLSGGRLRVGTFTTAGIHLLPPVLSAFRRAHPEVELAVADYEPPGGIGA 136 Query: 141 ITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPALH--QTWNLD 198 + GEVD+ + H P + E L + + H + Sbjct: 137 VVAGEVDLALT----HAYEPAAAEPPPAGVVVEPLLVEELVLVASVGHRLSEGTGRLPVG 192 Query: 199 TFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQPDNLLLATAPR 258 P IS ++ L E G + P + + L +A P Sbjct: 193 ELAGRPLISSAPTHPPRRGVEKALAEAGATPAVVCESPGYALVCALV--SAGLGVAVVPE 250 Query: 259 YCQYYN 264 Sbjct: 251 MVASMA 256 >UniRef50_P77782 Pep2 n=2 Tax=root RepID=P77782_ENTAE Length = 320 Score = 127 bits (320), Expect = 5e-28, Method: Composition-based stats. Identities = 50/276 (18%), Positives = 98/276 (35%), Gaps = 14/276 (5%) Query: 6 TTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPT 65 + L L L + + S+ KAA I +T A+S+S+A L F LF + G++PT Sbjct: 9 RHVTLRELRLLLAVARSGSILKAANEIGLTQPALSRSIADLEGAFGVRLFDRTNRGVAPT 68 Query: 66 PLMVSMEQNLAEWMQMSNLLLDKPHHQ-TPRGLKFELAAESPLMMIMLNALSKQIYQRYP 124 P + + + +++ + + + +L + + P Sbjct: 69 PHGEVLLRRATGVFEELRQAVNELRALADAAHGELRIGGTPAMCAGLLPRIIGTVRSDRP 128 Query: 125 QATIKLRNWDYDSLDAITRGE-VDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVW 183 + + + L + G +D+G + S +L+ +E LF D V Sbjct: 129 RLQFHVAELESGPLASEVVGRSLDLGLGREHAVRESHDLV--------FEGLFEDRLFVV 180 Query: 184 LRKDHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRE-RTIAMSLPEFEQS 241 HP + +L+ LR+ + E + T L G A++ Sbjct: 181 AGSQHPLAERRSISLEETLRHHWVLPT-EGAVTAHLQGEFGRQGLAIPEAAITTMSMLVR 239 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLP 277 + A + L ++ N L ++ + LP Sbjct: 240 CELIA-TGSFLTVMYGSVLRFGNAPKSLRVLPVDLP 274 >UniRef50_C6CDP6 Transcriptional regulator, LysR family n=7 Tax=Enterobacteriaceae RepID=C6CDP6_DICDC Length = 309 Score = 127 bits (320), Expect = 5e-28, Method: Composition-based stats. Identities = 37/277 (13%), Positives = 92/277 (33%), Gaps = 16/277 (5%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 + L L L L + R T A R+ ++ A+S +L + A LF + ++ Sbjct: 8 LPALSLKQLQYFVTLARLRHFTDTADRLAISQPALSSALRHIEAVLGGRLFNRTASAVTL 67 Query: 65 TPLMVSMEQNLAEWMQMSNLLLDKPH--HQTPRGLKFELAAESPLMMIMLNALSKQIYQR 122 T L S+ + + ++ + + + +M + + + +R Sbjct: 68 TALGASVLPHAERILNVAQSGFEDMRRIADNGGDGSVRIGLVPSVSSLMFPDVPRLLAER 127 Query: 123 YPQATIKLR-NWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPC 181 +P+ ++ + + + + +G +D + +S+P ++ L D Sbjct: 128 FPRVRVEFHDHANDSLVSLLEKGRIDFAIGALD---------NSVPSILEIHPLQEDPLV 178 Query: 182 VWLRKDHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQ 240 + D + + I + + + + + + + + E Sbjct: 179 AVMPADDALATPSGLDWQQLDSRD-IVVFARGNVRRLVVAMAESGRYKFHVRHEVSYLET 237 Query: 241 SLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLP 277 + L +A PR + + L +V L P Sbjct: 238 LYGLVRS--GLAIAILPRIYTTHLHDNALSVVPLEQP 272 >UniRef50_UPI0001B53BEC LysR family transcriptional regulator n=1 Tax=Streptomyces sp. C RepID=UPI0001B53BEC Length = 280 Score = 127 bits (320), Expect = 5e-28, Method: Composition-based stats. Identities = 33/244 (13%), Positives = 78/244 (31%), Gaps = 15/244 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++++ L ++ E + T AA R++V+ S +S +AKL L ++ TP Sbjct: 1 MEMHQLRYFTAVVDEGTFTGAAHRLHVSQSGISTQVAKLERELGQQLLDRGGRRVALTPA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRGL-KFELAAESPLMMIMLNAL--SKQIYQRYP 124 ++ + + + + L + L + + +P Sbjct: 61 GEAVLPLAKNALATLDAIRHTAAEFADAVRGRVRLGM--IAGCSIAPFLDTVADLGRTHP 118 Query: 125 QATIKLRNWDYDSLD-AITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVW 183 + L D+L + G +D+ G ++ +V+ + Sbjct: 119 GIELSLHEDHSDALQAQVLAGSLDLALIGYAGETA---------PGLEADVVIDEPLAAV 169 Query: 184 LRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 + HP L + + A ++ + LG + + + L Sbjct: 170 VPAGHPLDRPALRLAGLRDEKILCLSRGTGIRAAYEDSCRRLGLDPRVDLDASSPAALLR 229 Query: 244 MAAQ 247 +A + Sbjct: 230 LAGR 233 >UniRef50_Q1GEX3 Transcriptional regulator, LysR family n=1 Tax=Ruegeria sp. TM1040 RepID=Q1GEX3_SILST Length = 306 Score = 127 bits (320), Expect = 5e-28, Method: Composition-based stats. Identities = 37/257 (14%), Positives = 88/257 (34%), Gaps = 15/257 (5%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 + L L L +L + +AA+++ ++ ++S +A L PL GL Sbjct: 1 MPELSLRHLRYFAVLSRALQFRRAARQLGISQPSLSLQIAALEEIVGAPLLERRRNGLIL 60 Query: 65 TPLMVSMEQNLAEWMQMSNLLLDKPHH-QTPRGLKFELAAESPLMMIMLNALSKQIYQRY 123 T + + LL++ + L + + +L + K++++ Y Sbjct: 61 TAAGRDVAARAERILADCELLVNASATRRAGLSGTLRLGSSPTIGPYILPQVLKRLHETY 120 Query: 124 PQATIKLRN-WDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCV 182 P + +R+ D L+ + G+ D+ + I + LF + + Sbjct: 121 PDFRLIIRDGPSRDLLEDLVAGKHDLILTQAPIQR----------DDIRFHPLFREPLYL 170 Query: 183 WLRKDHPALHQTW-NLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQS 241 + + HP + +S+ + ++ + Q +G + + Sbjct: 171 VVPRGHPLATAGVARRRDLGQEQFLSLNPAYALRRQVEGLAQTVGARMQDDIDGTSLDAI 230 Query: 242 LFMAAQPDNLLLATAPR 258 M A + + P+ Sbjct: 231 RQMVAL--GMGVTLMPQ 245 >UniRef50_Q39MH6 Transcriptional regulator, LysR family n=3 Tax=Burkholderiales RepID=Q39MH6_BURS3 Length = 309 Score = 127 bits (320), Expect = 5e-28, Method: Composition-based stats. Identities = 41/243 (16%), Positives = 80/243 (32%), Gaps = 13/243 (5%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +DL L + + +VT+A+ +N+ AVS+ L L LF S G+ TP Sbjct: 1 MDLKQLRAFVTVAETGNVTRASSLLNLVQPAVSRQLRLLEEDMGTELFDRSRHGMQLTPS 60 Query: 68 MVSMEQNLAEWMQMSNLL-LDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 +M + + + + P + + ++ L+ ++ +RYP Sbjct: 61 GKTMLEYARRILNEVARAKAEIQPTEGPVAGIVSIGLLASTSDLLATRLAGEVARRYPHI 120 Query: 127 TIKL-RNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 ++L + D + G+VD + A+ + L + Sbjct: 121 RLRLTIGYAGHLQDWLEAGDVDAALLYGQKET----------PALHVKALIDESLWAVAA 170 Query: 186 KDHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 + L+ R P I Q A+++ E G + + Sbjct: 171 PSAGLSRKRPLPLERVAREPFILPSAPQGLRAAIEHAAAEAGVTLQVFAETNALSVQKEL 230 Query: 245 AAQ 247 AQ Sbjct: 231 VAQ 233 >UniRef50_C7NJ53 Transcriptional regulator n=1 Tax=Kytococcus sedentarius DSM 20547 RepID=C7NJ53_KYTSD Length = 327 Score = 127 bits (320), Expect = 5e-28, Method: Composition-based stats. Identities = 51/310 (16%), Positives = 107/310 (34%), Gaps = 16/310 (5%) Query: 13 LLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSME 72 L ++ + ++ S T AA + T A+S+ + +L PL + T + Sbjct: 7 LRIMRAISEQGSFTAAAHSLGYTQPAISQMVRRLEGRIGTPLVERQGRTVRLTQAGQVLA 66 Query: 73 QNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNALSKQIYQRYPQATIKLR 131 ++ + + + + + +AA ++ + + +P I+L Sbjct: 67 RHAVTVLSLLDTAEQELSALAGLQSGRVRVAAFPSSSAALVPHALRDLRAEHPAIEIQLT 126 Query: 132 NWD-YDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPA 190 + +SL A+ G D+ + S + L ++ + +D + L +DHP Sbjct: 127 EAEPPESLAALRDGRCDLAVAFSHSGTPVGREVDDL-AGLEIRDILTDEMLIALPEDHPQ 185 Query: 191 L-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQPD 249 T L P I+ C ++ QE G + ++ L + Sbjct: 186 AGGDTVALAALADDPWIAGCARCRGHLM--HLGQEAGFIPRVEFQTEDYVAVLGLV--SA 241 Query: 250 NLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWLRE 309 L A PR + + +VALPL ++ E + P + + + Sbjct: 242 GLGAALVPRMVLRHVRHEG--VVALPL------SQRSERTIHAVTTADLLRVPAVAAMMD 293 Query: 310 TIKNLYASMA 319 ++ MA Sbjct: 294 SLCRAAGEMA 303 >UniRef50_A0JQW9 Transcriptional regulator, LysR family n=2 Tax=Arthrobacter RepID=A0JQW9_ARTS2 Length = 294 Score = 127 bits (320), Expect = 5e-28, Method: Composition-based stats. Identities = 48/298 (16%), Positives = 96/298 (32%), Gaps = 26/298 (8%) Query: 12 LLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSM 71 L + +E +AA+R+N+T +S+ + KL L + T + Sbjct: 6 QLAGFIAVAEELHFGRAAERLNMTQPPLSRQIQKLEKTVGAELLERDNRKVRLTAAGTAF 65 Query: 72 EQNLAEWMQMSNLL-LDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQATIKL 130 + M ++N L + + + + +L L ++I P I L Sbjct: 66 LEEARRLMALANRAPLTAQRIASGSSGLIRIGFTAASGLSILGPLLEKISAGLPGVDIDL 125 Query: 131 RNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHP 189 + + + GE+DIG + + D +L + + HP Sbjct: 126 HELVTGEQIAGLQSGELDIGLARPPING----------DFFDSYLLQRETMVLAAPSGHP 175 Query: 190 A--LHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRER-TIAMSLPEFEQSLFMAA 246 L++ D P I ++ D ++ L + + ++ + + + A Sbjct: 176 LTELNRHVREDDLKDVPLIMHSP-GEASYFYDLAVRMLQIQHANVVHTVSQILTMVSLVA 234 Query: 247 QPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 +A PR L + V V +W+ RN NP + Sbjct: 235 A--RRGVALVPRS----TSLLGIQGVDF---LPLEGSAHYPVELHAVWN-RNITNPAL 282 >UniRef50_D2TUF6 LysR-family transcriptional regulator n=1 Tax=Citrobacter rodentium ICC168 RepID=D2TUF6_CITRO Length = 311 Score = 127 bits (320), Expect = 5e-28, Method: Composition-based stats. Identities = 49/277 (17%), Positives = 99/277 (35%), Gaps = 15/277 (5%) Query: 1 MKKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPL 60 M ++ DL L + +E+++T+AA+R + SAVSK +A+L PL + P Sbjct: 1 MDTAMR-FDLISLSIFVAVAEEQNLTRAARRKHTAVSAVSKRIAELEQQVGTPLMLRMPR 59 Query: 61 GLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQI 119 G++ TP S+ + + + ++ + S +M L + Sbjct: 60 GIALTPAGHSLLYHARQVFHKLEKMEEELSDYAAGIRGHIRIYTISAALMNHLPGVISNY 119 Query: 120 YQRYPQATIKLR-NWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSD 178 YPQ I++ + + + GE D+GF + I++ D Sbjct: 120 LSLYPQTDIEIEEHTGLAVVQGLLAGEADVGFFSDWTP----------SAGIEFWPWQQD 169 Query: 179 VPCVWLRKDHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPE 237 + V + HP + L I + ++ L+ + G+ + + + Sbjct: 170 LLSVLVWPTHPLAERDELKFEDILYEKLIGSHRNSAVSYILERQARAYGKTLDVGLRVSS 229 Query: 238 FEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVAL 274 F + AQ + + + L+ L Sbjct: 230 FISMAELVAQKLGIAVLPVNEVASS-TLHGGVRLIPL 265 >UniRef50_Q89E43 Transcriptional regulatory protein n=1 Tax=Bradyrhizobium japonicum RepID=Q89E43_BRAJA Length = 306 Score = 127 bits (320), Expect = 5e-28, Method: Composition-based stats. Identities = 31/273 (11%), Positives = 94/273 (34%), Gaps = 14/273 (5%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +D L + + S++KA+ + V A+S+ + L LF + G+ T Sbjct: 1 MDFRQLRTFSCVAELGSLSKASDTLRVAQPALSRQIKLLEHELRIELFTRNGRGMVLTEA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQT-PRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + ++ + + D P + L + ++ +++ +++P Sbjct: 61 GRLLLARTSGIVRQIDQIRDDIQSAKGPPSGQVVLGLVPTVSCVLSARFARRCVEKFPGI 120 Query: 127 TIKLR-NWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 ++++ ++ ++ + RGE+D+ S L ++ + L D Sbjct: 121 SLRIVESYSGHLVEWLHRGEMDLAILYG----------RSADLHLNVQSLGRDNIVAVGP 170 Query: 186 KDHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 + ++ + LR + +++ + + + + F + Sbjct: 171 RGCGLARKKSVEIGWLLRQRLVLPSHSHGLRALIEHAAAQRKIKLNVQLEADSFRVLTSL 230 Query: 245 AAQPDNLLLATAPR-YCQYYNQLHQLPLVALPL 276 + L + + + + +V+ P+ Sbjct: 231 VEEGLGFALLPPSSVHGEVADGRLETAVVSRPM 263 >UniRef50_D2Q132 Transcriptional regulator, LysR family n=3 Tax=Actinomycetales RepID=D2Q132_9ACTO Length = 303 Score = 127 bits (320), Expect = 5e-28, Method: Composition-based stats. Identities = 40/229 (17%), Positives = 87/229 (37%), Gaps = 7/229 (3%) Query: 13 LLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSME 72 L L+ L +VT AA+ +++TPSAVS+ LA L + L ++ T + Sbjct: 4 LRVLRALADHGTVTAAAEVLHLTPSAVSQQLAALESEVGQELLERRGRRVAITSAGRLLL 63 Query: 73 QNLAEWMQMSNLLLDKPH-HQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQATIKLR 131 + + D H + +AA + + +++ ++ + P + +R Sbjct: 64 SHADTILTEVERAEDAMRLHADGATGELRVAAFATAISLLVAPSLARLRETTPGLRLVVR 123 Query: 132 NWD-YDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPA 190 + + + ++ + G+VD+ + ++ + L+++ L DHPA Sbjct: 124 DAEGHQAVTQLLDGDVDLAVTVEHRGSPR----AADDDRLTLTPLYAEPFVAVLPPDHPA 179 Query: 191 LHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEF 238 T +L T + + ++ G IA + +F Sbjct: 180 AATTAVDLATLAADDWVMTSVGNPIRDVVLLACEQAGFRPHIAHTSDDF 228 >UniRef50_Q46PU2 Transcriptional regulator, LysR family n=1 Tax=Ralstonia eutropha JMP134 RepID=Q46PU2_RALEJ Length = 315 Score = 127 bits (320), Expect = 5e-28, Method: Composition-based stats. Identities = 47/267 (17%), Positives = 93/267 (34%), Gaps = 9/267 (3%) Query: 12 LLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSM 71 +L + +++ S+ +AA+ +N+T AV+K + +L + PL + G++ T + Sbjct: 16 QILVFEQVLRSGSILRAAQALNMTQPAVTKVIHELESHLGAPLLIRGNRGVTTTEFGELV 75 Query: 72 EQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNALSKQIYQRYPQATIKL 130 + + L D+ + + ++L + + ++ P ++ L Sbjct: 76 ARRAKTLLAELRHLTDEISAFREGTSGQVLIGTLISASAVLLPRAIQLLKEQAPAVSVTL 135 Query: 131 RNWDYDS-LDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHP 189 R D L A+ G++D+ R L I L + CV HP Sbjct: 136 RVGQMDQLLPALAVGDLDVVVGRIPEDVSWRATAPGLEAEI----LHREPLCVVGGVHHP 191 Query: 190 AL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQP 248 + L YP I + S + + + G A + +A Sbjct: 192 MASRASTTLQALSDYPWILPTRDSSLRQTAERLFYDTGLAL-PANVVESLSVMTNVALMF 250 Query: 249 DNLLLATAPRYCQY-YNQLHQLPLVAL 274 D L PR + L ++ L Sbjct: 251 DQKTLGLMPRSAARQFVDTGSLAMIPL 277 >UniRef50_D2RNT0 Transcriptional regulator, LysR family n=1 Tax=Acidaminococcus fermentans DSM 20731 RepID=D2RNT0_ACIFE Length = 293 Score = 127 bits (320), Expect = 6e-28, Method: Composition-based stats. Identities = 44/289 (15%), Positives = 100/289 (34%), Gaps = 24/289 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 + L+ L Q + ++ S+TKAA+ ++++ AVS ++ +L F LF S L T Sbjct: 1 MKLHQLRYFQEVCRQHSITKAAEELHISQPAVSAAIRELEEEFGLKLFKRSHKKLVLTTE 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQAT 127 + E +Q +N + D + + + + + ++++P+ Sbjct: 61 GSYFSLEVEELLQKANQIADDMTRLQKKNTSIRVGLPPMMEALEIP-FLALFHRKHPEIR 119 Query: 128 IKLRNWDYDSLD-AITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRK 186 ++L + + SL A+ G +DI + + ++ E+++ + + Sbjct: 120 LELHHGNSLSLRKALQDGRIDIAIVSGKGADQDDMATRAMK---HCEIVY------CVSR 170 Query: 187 DHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMA 245 HP +T ++ + + I Q + + I S + + + Sbjct: 171 SHPLARETAISIPQLAQEDLVEIENSQKFRETVLERFHQDHCTPRIQWSTSQLYTKIQLL 230 Query: 246 AQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLW 294 + + L L L L +LW Sbjct: 231 -RSGVAGGFLYRAVAEREPDLVPLSLTPP-----------LYYEIEMLW 267 >UniRef50_B5CY17 Putative uncharacterized protein n=2 Tax=Bacteroides RepID=B5CY17_9BACE Length = 297 Score = 127 bits (320), Expect = 6e-28, Method: Composition-based stats. Identities = 32/243 (13%), Positives = 84/243 (34%), Gaps = 13/243 (5%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L + + ++ ++AA+ ++++ S +S+ + +L D LF + PT Sbjct: 1 MELRQLKYFKEACELQNFSEAARVLHISQSTLSQQIKQLEDELDVLLFDRIGKRIVPTEA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTP-RGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 ++ ++ + + M +L A + YP+ Sbjct: 61 GLAFLPYAVRAIRDAENGKQIIRDLKGIETGVLHVGVT-YSMSPLLIAALGLFSKTYPKI 119 Query: 127 TIKLR-NWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + + + LD + ++D S + + ++ LFS + + Sbjct: 120 KVNVSFGTSEELLDRLEANQLDFVLSFKPE---------GVSEHLETMPLFSSMLRFIVH 170 Query: 186 KDHPALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 HP + L P I + +D++ ++ E T+ + + + + Sbjct: 171 CSHPLAELSSITLKRLSETPLILPGKGFATRKRVDDLCRKHQLELTVGVEMNDVHTIIHT 230 Query: 245 AAQ 247 + Sbjct: 231 LRE 233 >UniRef50_P16931 HTH-type transcriptional regulator dgdR n=16 Tax=Proteobacteria RepID=DGDR_BURCE Length = 294 Score = 127 bits (320), Expect = 6e-28, Method: Composition-based stats. Identities = 40/273 (14%), Positives = 90/273 (32%), Gaps = 22/273 (8%) Query: 6 TTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPT 65 +L+++LL ++ + R++++AA R+ T SA+S+ + +L D PLF + G+ T Sbjct: 12 RSLEIDLLRSFVVIAEVRALSRAAARVGRTQSALSQQMKRLEDIVDQPLFQRTGRGVVLT 71 Query: 66 PLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQ 125 + + ++ + + T + L L +Q ++PQ Sbjct: 72 HPGERLLVHAQRILRQHDEAMADLCG-TGLTGTIRFGCPDDYAEVFLPPLLRQFSSQHPQ 130 Query: 126 ATIKLR-NWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 A +++ L+ + + VD+ + +++ + Sbjct: 131 AIVEIVCGPTPRLLEQLEKRAVDLAMISLPDDGANDDIIR------------REQLVWIG 178 Query: 185 RKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 F P + D A + L GR+ +A + + + Sbjct: 179 YPG-------LEPAHFDPLPLALSDPDTLDHIAACDALHRAGRDYRVAYASSSLAGLIAL 231 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLP 277 + T ++ PLP Sbjct: 232 VRSGQAFAVMTQTAVPADLAIVNG-DPRLPPLP 263 >UniRef50_C7MTU9 Transcriptional regulator, LysR family n=3 Tax=Actinomycetales RepID=C7MTU9_SACVD Length = 319 Score = 127 bits (320), Expect = 6e-28, Method: Composition-based stats. Identities = 53/315 (16%), Positives = 104/315 (33%), Gaps = 24/315 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L + +ER+ T+AA+R++V+ S +S + +L LF S ++ TP Sbjct: 1 MELRQLEYFVAVAEERNFTRAAERVHVSQSGISAQIRQLERELGATLFDRSTRTVTLTPA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTP-RGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + + + + T + + + L ++ +P Sbjct: 61 GRAALDHARAALAAAAAVDQAVSDVTGLLRGRLTVGMVIGCTLTPLFDALAAFHRAHPGV 120 Query: 127 TIKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + L + D +D + G +D+ G P P ++ + S+ + Sbjct: 121 ELSLWEDNSDRLVDGVRAGTLDLALVGAAGAP---------PHDLNALTIISEPLVAVVP 171 Query: 186 KDHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 HP Q +L + +P + D G E TI + + Sbjct: 172 PGHPLATQPQVSLGDLVDHPLACMPPGTGLRAVFDEACTVRGIEPTITWEA---SAADAL 228 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 A L + ++ L ALPL + L+W NP + Sbjct: 229 AELTFRELAVAV--LSESMATHYRDRLTALPL-----DDVDIPALLALVWKPST--NPAL 279 Query: 305 VWLRETIKNLYASMA 319 L E + + A Sbjct: 280 HALIEHCEQAFGESA 294 >UniRef50_B0MH18 Putative uncharacterized protein n=4 Tax=Bacteria RepID=B0MH18_9FIRM Length = 304 Score = 127 bits (320), Expect = 6e-28, Method: Composition-based stats. Identities = 42/275 (15%), Positives = 91/275 (33%), Gaps = 15/275 (5%) Query: 6 TTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPT 65 +++L L L + ++ T AA + + SA+SK++ + D L + T Sbjct: 8 RSMNLKQLTYFVALAKNQNFTTAANELFICQSALSKTIKAMEEDLDVQLVDRTAKRFCLT 67 Query: 66 PLMVSMEQNLAEWMQMSNLLLDKPHH-QTPRGLKFELAAESPLMMIMLNALSKQIYQRYP 124 P + Q + ++ N ++ + + + I ++ + + YP Sbjct: 68 PEGRMLYQEGRDALESINNQMEHLRDCINAENGEISVGIPPVISTIYFASIIQGFRKAYP 127 Query: 125 QATIKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVW 183 + + +++ + + GE+DIG +L +F + Sbjct: 128 GIRLVIAEEGANTVKEKVQSGEIDIGV----------VILPFASDDFHILPVFKSDNVLT 177 Query: 184 LRKDHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 + DHP + IS+ + G E I M +++ Sbjct: 178 VSTDHPFAGREKAAFRELRNEEFISLDKTFMLHSRTRELCHMSGFEPNIVMESSQWDFVA 237 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLP 277 M N +A PR ++ ++ L P Sbjct: 238 EMV--SLNQGVAILPRPILSRFNSDKIKILTLTEP 270 >UniRef50_B1HZ14 Transcriptional regulator-like protein (LysR family) n=2 Tax=Bacillaceae RepID=B1HZ14_LYSSC Length = 295 Score = 127 bits (320), Expect = 6e-28, Method: Composition-based stats. Identities = 40/270 (14%), Positives = 89/270 (32%), Gaps = 15/270 (5%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L +++ S TKAA V+ ++SKS+ KL L S + T Sbjct: 6 MELRDLKAFMSVVEHGSFTKAANESFVSQPSLSKSIKKLEDTLHVELLNRSTRNVELTDA 65 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTP-RGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + + M L + +L + + ++++ +Q+YP Sbjct: 66 GSIVFKQGQKIMLSVQDLHILLDDLLNIKTGSIKLGIPPLIGTLFFPKIAREFHQQYPDV 125 Query: 127 TIKLRNWDYDSLDAI-TRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 ++L ++ + G VD+G + R + D V++ Sbjct: 126 HLELVERGAKTVGTLVENGNVDMGIVVLPTDERK----------FSVQPFVEDQFYVFIN 175 Query: 186 KDHPALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 + HP + L I E + + + +G + +++ + + Sbjct: 176 ELHPLAQFKEIQLQDLKNETFIIFAEEFALHDYVIKSCESVGFSPHVGYKSSQWDLIVEL 235 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVAL 274 NL + P + ++ L Sbjct: 236 V--SSNLGITLLPYSIAAKQTNKNVKMIPL 263 >UniRef50_Q0BF95 Transcriptional regulator, LysR family n=3 Tax=Burkholderiaceae RepID=Q0BF95_BURCM Length = 312 Score = 127 bits (320), Expect = 6e-28, Method: Composition-based stats. Identities = 48/278 (17%), Positives = 96/278 (34%), Gaps = 15/278 (5%) Query: 6 TTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPT 65 + L + L L + + S+ +AA ++++ AV+K L + A LF GL PT Sbjct: 10 SRLKMQHLRLLLSIEERGSLRQAADALSLSQPAVTKMLQDMEALLGVTLFERHLRGLRPT 69 Query: 66 PLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNALSKQIYQRYP 124 +++ + L D+ K + A +++ + +++ + +P Sbjct: 70 RFGMAVTRYANLVFSDLANLHDELVSLETGRIGKVRIGAVMAPTPVLMAEVIRRLKRDHP 129 Query: 125 QATIKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVW 183 + + D L + R ++D+ + + +E L + V Sbjct: 130 GLNMTVHVDTSDMLVPMLERDQLDLVLGRVPEGWDAS--------HLTFEQLGDERLAVV 181 Query: 184 LRKDHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRE-RTIAMSLPEFEQS 241 + DHP +T YP I +D +E G + + Sbjct: 182 VGCDHPLAKRTDPTFGELATYPWILQPRPSPMRALIDRSFEEAGVTAPQSTIETAAILMT 241 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFD 279 + D L+A P ++ L L LP+P Sbjct: 242 TSLLTGSD--LVAVVPMAVATFHASMGL-LHILPVPLP 276 >UniRef50_UPI00016945D8 transcriptional regulator, LysR family protein n=1 Tax=Paenibacillus larvae subsp. larvae BRL-230010 RepID=UPI00016945D8 Length = 292 Score = 127 bits (320), Expect = 6e-28, Method: Composition-based stats. Identities = 37/255 (14%), Positives = 88/255 (34%), Gaps = 18/255 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L Q + + + +TKAA+ +++ S++S+++++L LF + Sbjct: 1 MELLQLKYFQKVAKIQHMTKAAQELHIAQSSLSRTISRLEEDLGVSLFERKGRQIHLNMF 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTP-RGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + ++ + + A + +L L K+ +P Sbjct: 61 GQRFLNRVERIFTELEEGTEEIAELQGIENKRVVVGAT---ITRLLPDLFKEFLTVHPDV 117 Query: 127 TIKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 +L + + + I +G +D S H I + ++ + + Sbjct: 118 KFQLFQFSTTEIQEQIQQGTIDFCISSPPIHQS----------GIVSIPIMTEEFFLAVP 167 Query: 186 KDHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 ++H +T L IS+ + S ++ ++ G + I + E + Sbjct: 168 QNHYLANRRTVKLSDIAEESFISLTMDYSFQESIYSLCIRSGFKPKIMFESNDLEVIGKL 227 Query: 245 AAQPDNLLLATAPRY 259 D +A P Y Sbjct: 228 V--TDGFGVAFMPAY 240 >UniRef50_A3PPE3 Transcriptional regulator, LysR family n=5 Tax=Alphaproteobacteria RepID=A3PPE3_RHOS1 Length = 309 Score = 127 bits (320), Expect = 6e-28, Method: Composition-based stats. Identities = 35/270 (12%), Positives = 81/270 (30%), Gaps = 15/270 (5%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 + L LL +M+ + +AA+ + V+ AVS L +L LF + + PT Sbjct: 10 ISLRLLEIFAAMMRAGTTVEAAEMLGVSQPAVSAGLKQLETQLGIVLFERASRRMMPTAE 69 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQ-TPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + M + + + P+ + + + P Sbjct: 70 ARELFAEIRPMFSMLRSFTQTARDIREGLSGRLRIISTPPIGHTLAPRALVEFLRERPGV 129 Query: 127 TIKL-RNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 ++ +DA+ G D+G + + ++ EVL + Sbjct: 130 SVAFDVRRLEHVIDAVQSGSADLGLALSMERYTA----------LNSEVLHETHMVALVD 179 Query: 186 KDHPALHQ-TWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 P Q + +P + I + + + + G + + + + Sbjct: 180 AAGPLAAQTQVTAEDLAAHPFVGIEGDSKLGGLVRSAFLQSGLGYLPQIEVRYVSTAAEL 239 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVAL 274 L A + +Y+ + + Sbjct: 240 VNH--GLGNAVVDPFTAHYHARPGIAIRPF 267 >UniRef50_C8Q1K2 Transcriptional regulator, LysR family n=1 Tax=Pantoea sp. At-9b RepID=C8Q1K2_9ENTR Length = 295 Score = 127 bits (320), Expect = 6e-28, Method: Composition-based stats. Identities = 42/278 (15%), Positives = 88/278 (31%), Gaps = 16/278 (5%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L L + + + KAA+ + +T A++K L +L ++ L + G+ T Sbjct: 1 MELKDLHYLLAVKETGHLGKAAQSLGITQPALTKCLQRLEKFYATRLILKVGRGMQLTEA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + + + + M + L + ML LS+ + + P A Sbjct: 61 GLLLCERAQKVVHMMQVTRQDLQALGAGTAGVIRLGVAATAAEFMLPMLSRDLLHKAPTA 120 Query: 127 TIKLRNWDYDSLD-AITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 +++ D L + ++D+ L D + Sbjct: 121 RLEVTVGMNDLLQKMLRENKIDLILGFLPDGNS----------EFITRPLIDDPVVIAAS 170 Query: 186 KDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRE-RTIAMSLPEFEQSLFM 244 K HP + + +Y + + + L+ L+ G + M + Sbjct: 171 KRHPLANIHPTPEQLDQYHWLLPSAQVATRQWLEQRLRSGGYAVPRVQMESNTLSPLRQV 230 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQ 282 A L + + LV +PLP Sbjct: 231 IASTQLLS---FLSRRLLKGEGDEASLVEIPLPLVTMP 265 >UniRef50_A5FEQ6 Transcriptional regulator, LysR family n=1 Tax=Flavobacterium johnsoniae UW101 RepID=A5FEQ6_FLAJ1 Length = 287 Score = 127 bits (320), Expect = 6e-28, Method: Composition-based stats. Identities = 37/278 (13%), Positives = 94/278 (33%), Gaps = 18/278 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +DL + L +E A ++N+T SA+S+ + L LF + + T Sbjct: 1 MDLQQIKYFLALARELHFWNTAGKMNITQSALSRQIQSLENQLGVQLFERNKRNVKLTSA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQ-TPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 +++ + + ++ + ++ + +I +P+ Sbjct: 61 GRFLQEKWEVELSKLEYIHQSARQIHLGESGTLTISHPDSISASIMPDILSRISDAFPKL 120 Query: 127 TIKLRNWDYDSLDA-ITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 IKL Y++ + ++D+ + +H R I E +++D + + Sbjct: 121 KIKLVQVLYENQQEFLRNYKIDLAITRDINHAR----------DIKSEKIYTDNLAIVVP 170 Query: 186 KDHPALHQT-WNLDTFLRYPHISICW--EQSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 ++HP ++ I S + + + + + + Sbjct: 171 ENHPYQKPEDLTKESLANQKFILPTTDEGSSYSDLIQRLFNSFENAPEVYLHSEFGSAII 230 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDE 280 + + L +A P ++++ + + LPL D Sbjct: 231 ALVRK--GLGIAILPDSY-VFHEISGIRFIKLPLETDL 265 >UniRef50_Q0K6U2 Transcriptional regulator, LysR-family n=3 Tax=Cupriavidus RepID=Q0K6U2_RALEH Length = 322 Score = 127 bits (320), Expect = 6e-28, Method: Composition-based stats. Identities = 45/276 (16%), Positives = 90/276 (32%), Gaps = 16/276 (5%) Query: 7 TLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTP 66 DL + + S+T+ A+R+++ P+A S+ + +L A LF P G++ T Sbjct: 13 HFDLTTVQLFIAVSDFGSITRGAERLHLAPAAASRRILELEAQLGVSLFERLPHGMALTE 72 Query: 67 LMVSMEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNALSKQIYQRYPQ 125 ++ + + D +AA ++ L ++ P Sbjct: 73 AGRALLAHARGITHTVQRMQDDAASFVGGDLGVVRVAAPKSAVIQFLPFDIQRCATACPG 132 Query: 126 ATIKLRNWDYDSLDA-ITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 I L+ + + + RG VDIG +D + + Sbjct: 133 VRIDLQEMNSAEVQQSLRRGTVDIGIYDGSLGVIDLPTAPYR----------NDELVLVV 182 Query: 185 RKDHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 + H + D L I + + + L+ + +E GR + M + F+ Sbjct: 183 ARGHALARRRKVTPDDVLDCDLIVLSESSAISIVLERLAEEAGRVLRMRMRVGGFDSMAA 242 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFD 279 + AQ + + V LP+ Sbjct: 243 LVAQ-NLGGGVMPEAIAREVAA--GSRFVRLPIAAP 275 >UniRef50_A3UQR4 Transcriptional regulator, LysR family n=1 Tax=Vibrio splendidus 12B01 RepID=A3UQR4_VIBSP Length = 301 Score = 127 bits (320), Expect = 6e-28, Method: Composition-based stats. Identities = 35/242 (14%), Positives = 78/242 (32%), Gaps = 15/242 (6%) Query: 10 LNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMV 69 + L L +E + +AA+++N+ A+S+SL KL + LF+ + + T Sbjct: 7 IRHLKHFFALAEELNFRRAAEKLNIAQPALSRSLQKLESDLGVILFIRTTRLVELTDAGK 66 Query: 70 SMEQNLAEW-MQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQATI 128 + + + + + + + + + L L K YP + Sbjct: 67 AFHAGAHQAFLSLIDAEKSAMRVKIGEEGSLRIGYTNFAITGQLPQLLKAFKDSYPLIRL 126 Query: 129 K-LRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKD 187 + + + D ++++ + +D GF + D + Sbjct: 127 ELIHQFSADQIESLEKERLDFGFITGPLIYKGISSFPFQ----------QDPLVAIVPDS 176 Query: 188 HPALHQT-WNLDTFLRYPHISICWEQSDTWA--LDNVLQELGRERTIAMSLPEFEQSLFM 244 HP H+ +L I + + V + G I + E L + Sbjct: 177 HPLSHKPSIDLIDLRHESFILGNANNWTHFFKIIQRVCRNAGFMPNIVEEAYDTEAILGL 236 Query: 245 AA 246 + Sbjct: 237 VS 238 >UniRef50_B2T942 Transcriptional regulator, LysR family n=1 Tax=Burkholderia phytofirmans PsJN RepID=B2T942_BURPP Length = 316 Score = 127 bits (319), Expect = 7e-28, Method: Composition-based stats. Identities = 46/222 (20%), Positives = 74/222 (33%), Gaps = 13/222 (5%) Query: 10 LNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMV 69 L LL L + A+++NVT AVSK LA+L A P+ L TP+ Sbjct: 17 LRLLTMFDSL---GQIRLVAEKLNVTQPAVSKQLAELEAGLGVPVLRRVGNRLFFTPVGE 73 Query: 70 SMEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQIYQRYPQATI 128 ++ + E + T K + A + +M + L ++ +R P + Sbjct: 74 TLMKRAREVFHQLEQARFEVDALTSGISGKVSVGAVATVMPVFAPQLVLELKKRAPHVNV 133 Query: 129 KLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKD 187 D + G +D S +S + D V +D Sbjct: 134 SFFEATSDRLFPMLGAGALDFVLSRTGPPRADAAAFASH-------AVLDDPIVVVCGRD 186 Query: 188 HPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRE 228 HP + + + P I E AL + E G E Sbjct: 187 HPLAARRTISAADLVELPWILPPREAPTFLALQEWMHEHGLE 228 >UniRef50_UPI000178A8A2 transcriptional regulator, LysR family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI000178A8A2 Length = 300 Score = 127 bits (319), Expect = 7e-28, Method: Composition-based stats. Identities = 41/277 (14%), Positives = 83/277 (29%), Gaps = 15/277 (5%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L + +E ++AA+++ V+ VS+ + +L A LF + T Sbjct: 1 MELKQLQYFMAICEELHFSRAAEKMGVSAPNVSQQIRRLEAELGVLLFDRVGKTIVLTDA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + ++ A D + +M NAL +Q YP Sbjct: 61 GAILHEHAAAVFGHLQQAGDAIADLKQMQGGSLSIGVLPGDADLMFNALLLDFHQTYPTI 120 Query: 127 TIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRK 186 ++ L + + +DIG + + LF + + + + Sbjct: 121 SLSLLE-TMKVTEQVLDRSIDIGVTIGPVIDERLTSIP----------LFHEEFSLAVHR 169 Query: 187 DHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMA 245 D P + L+ + + +D + G M L M Sbjct: 170 DDPLAGENFIPLNRLRSMNMVMFPPDHQCRKLIDRFCMDNGFAVQPHMVTTTLSSLLQMV 229 Query: 246 AQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQ 282 + PR + ++ +V L P Sbjct: 230 QS--GVGACVLPRLLLDNLRNTEIKVVHLRNPTPSQD 264 >UniRef50_Q12BV9 Transcriptional regulator, LysR family n=5 Tax=cellular organisms RepID=Q12BV9_POLSJ Length = 323 Score = 127 bits (319), Expect = 7e-28, Method: Composition-based stats. Identities = 43/264 (16%), Positives = 91/264 (34%), Gaps = 17/264 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L + E +AA R+N+T +++++A L A LF + + T Sbjct: 28 IELRLWRQFAAVADELHFGRAALRLNMTQPPLTQAIAHLEALLGLKLFDRTKRSVQLTAA 87 Query: 68 MVSMEQNLAEWMQMSNLL-LDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 ++ + + + L + + LA S + +L + +RYP+ Sbjct: 88 GAALLPEARDLLARAQALPVYARATADGEAGRLRLAFVSTVGFDLLPGWVRTFRERYPKV 147 Query: 127 TIKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 ++L D L A+ RGE+D GF P + + D + + Sbjct: 148 QLELIEATGDVQLQALERGEIDAGF--------MLHSPGFAPPGLTCRRISQDPLVLAVP 199 Query: 186 KDHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQ---ELGRERTIAMSLPEFEQS 241 + + ++ L L P + D + G +A + + Sbjct: 200 EQSVLVGKSGLVLQDLLEQPLVIF-PRHILPSLYDAIFAMYHAAGHLPRVAQEAIQMQTI 258 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQ 265 + + L +A P + + + Sbjct: 259 VNLV--SAGLGVAWVPDSVRQFQR 280 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_C6XIT5 Transcriptional regulator, LysR family n=1 Tax=H... 262 1e-68 UniRef50_B9Z480 Transcriptional regulator, LysR family n=1 Tax=L... 260 6e-68 UniRef50_A7ZTR6 HTH-type transcriptional regulator yidZ n=122 Ta... 254 4e-66 UniRef50_Q5P743 Transcriptional regulator, LysR family n=2 Tax=B... 251 2e-65 UniRef50_A6T413 Transcriptional regulator, LysR family n=1 Tax=J... 249 1e-64 UniRef50_A9VF88 Transcriptional regulator, LysR family n=77 Tax=... 249 1e-64 UniRef50_C3KKF8 Putative transcriptional regulatory protein, Lys... 247 4e-64 UniRef50_A1W256 Transcriptional regulator, LysR family n=2 Tax=C... 247 5e-64 UniRef50_A9G5G2 Nodulation protein D n=2 Tax=Proteobacteria RepI... 246 8e-64 UniRef50_Q12H69 Transcriptional regulator, LysR family n=14 Tax=... 244 4e-63 UniRef50_Q3KA14 LysR family regulatory protein n=24 Tax=Bacteria... 244 4e-63 UniRef50_C6CY97 Transcriptional regulator, LysR family n=1 Tax=P... 243 5e-63 UniRef50_Q2S713 Transcriptional regulator n=1 Tax=Hahella chejue... 243 6e-63 UniRef50_Q13QG3 Transcriptional regulator, LysR family n=9 Tax=P... 243 6e-63 UniRef50_A1WRT3 Transcriptional regulator, LysR family n=1 Tax=V... 242 9e-63 UniRef50_Q7W2A6 Transcriptional regulator n=3 Tax=Bordetella Rep... 242 1e-62 UniRef50_B4X4B4 LysR substrate binding domain protein n=1 Tax=Al... 241 2e-62 UniRef50_P39592 Uncharacterized HTH-type transcriptional regulat... 241 2e-62 UniRef50_Q12M05 Transcriptional regulator n=3 Tax=Gammaproteobac... 241 3e-62 UniRef50_C6ARG9 Transcriptional regulator, LysR family n=7 Tax=P... 240 3e-62 UniRef50_B1KAV0 Transcriptional regulator, LysR family n=5 Tax=B... 240 4e-62 UniRef50_C9NXV6 Transcriptional regulator LysR family n=1 Tax=Vi... 240 4e-62 UniRef50_Q2S7V2 Transcriptional regulator n=1 Tax=Hahella chejue... 239 1e-61 UniRef50_Q473Q1 Transcriptional regulator, LysR family n=9 Tax=B... 239 1e-61 UniRef50_B0C5B7 Transcriptional regulator, LysR-family n=1 Tax=A... 239 1e-61 UniRef50_Q0ARX0 Transcriptional regulator, LysR family n=1 Tax=M... 238 2e-61 UniRef50_A9W9P6 LysR substrate-binding n=3 Tax=Chloroflexus RepI... 238 2e-61 UniRef50_Q46YJ7 Transcriptional regulator, LysR family n=5 Tax=c... 238 2e-61 UniRef50_B2JSH4 Transcriptional regulator, LysR family n=2 Tax=B... 237 3e-61 UniRef50_C6IV95 LysR family transcriptional regulator n=4 Tax=Ba... 237 4e-61 UniRef50_B6R1K2 Transcriptional regulator, LysR family n=1 Tax=P... 237 4e-61 UniRef50_A0LD88 Transcriptional regulator, LysR family n=1 Tax=M... 237 4e-61 UniRef50_B5EGJ2 Transcriptional regulator, LysR family n=5 Tax=G... 237 4e-61 UniRef50_A8GKS5 Transcriptional regulator, LysR family n=1 Tax=S... 236 6e-61 UniRef50_D2P368 Transcription activator of glutamate synthase op... 236 9e-61 UniRef50_C6CYG5 Transcriptional regulator, LysR family n=2 Tax=P... 236 9e-61 UniRef50_A9CLK9 Transcriptional regulator, LysR family n=2 Tax=A... 236 9e-61 UniRef50_Q15UP0 Transcriptional regulator, LysR family n=4 Tax=A... 235 1e-60 UniRef50_P20668 HTH-type transcriptional regulator gltC n=17 Tax... 235 1e-60 UniRef50_C4KB22 Transcriptional regulator, LysR family n=37 Tax=... 235 2e-60 UniRef50_C0Z518 Transcriptional regulator n=3 Tax=Paenibacillace... 235 2e-60 UniRef50_Q04778 HTH-type transcriptional regulator alsR n=87 Tax... 235 2e-60 UniRef50_P10183 HTH-type transcriptional activator nahR n=67 Tax... 234 3e-60 UniRef50_B0BQD1 HTH-type transcriptional activator n=15 Tax=Prot... 234 3e-60 UniRef50_A1U1I0 Transcriptional regulator, LysR family n=67 Tax=... 234 3e-60 UniRef50_A6EYC4 LysR family regulatory protein n=1 Tax=Marinobac... 234 4e-60 UniRef50_Q1GMN1 Transcriptional regulator, LysR family n=1 Tax=R... 234 4e-60 UniRef50_C6J455 LysR family transcriptional regulator n=2 Tax=Ba... 234 4e-60 UniRef50_B8K739 Transcriptional regulator, substrate-binding of ... 234 4e-60 UniRef50_UPI00016C47B2 transcriptional regulator, LysR family pr... 234 4e-60 UniRef50_P37499 Uncharacterized HTH-type transcriptional regulat... 234 5e-60 UniRef50_Q3AG49 Transcriptional regulator, LysR family n=1 Tax=C... 233 6e-60 UniRef50_B1J7P4 Transcriptional regulator, LysR family n=5 Tax=P... 233 7e-60 UniRef50_B7VQ45 Transcriptional regulator n=8 Tax=Vibrionales Re... 233 7e-60 UniRef50_A4YPA1 Putative transcriptional regulator, LysR family ... 232 1e-59 UniRef50_A5W6Q9 Transcriptional regulator, LysR family n=12 Tax=... 232 1e-59 UniRef50_UPI00016945AE hypothetical protein Plarl_07755 n=1 Tax=... 232 1e-59 UniRef50_A9AQZ4 Transcriptional regulator, LysR family n=24 Tax=... 232 1e-59 UniRef50_Q13JD9 Transcriptional regulator, LysR family n=1 Tax=B... 232 1e-59 UniRef50_Q65GU9 Transcriptional regulator YbbE n=2 Tax=Bacillus ... 232 2e-59 UniRef50_A8V9B9 LysR-like regulatory protein n=2 Tax=Betaproteob... 231 2e-59 UniRef50_B9JIM7 Transcriptional regulator protein n=12 Tax=Prote... 231 2e-59 UniRef50_Q0BPL7 Transcriptional regulators, LysR family n=1 Tax=... 231 3e-59 UniRef50_A9FW21 Transcriptional regulator, LysR family n=2 Tax=M... 231 3e-59 UniRef50_A3I8L6 Transcriptional regulator, LysR family protein n... 230 3e-59 UniRef50_A9GLW1 Transcriptional regulator, LysR family n=1 Tax=S... 230 3e-59 UniRef50_B7WQP0 Transcriptional regulator, LysR family n=1 Tax=C... 230 3e-59 UniRef50_A5V8P8 Transcriptional regulator, LysR family n=1 Tax=S... 230 3e-59 UniRef50_B7IPY3 Transcriptional regulator, LysR family n=74 Tax=... 230 3e-59 UniRef50_C5CVL6 Transcriptional regulator, LysR family n=5 Tax=c... 230 4e-59 UniRef50_Q391Q9 Transcriptional regulator, LysR family n=1 Tax=B... 230 4e-59 UniRef50_A1U2R6 Transcriptional regulator, LysR family n=3 Tax=M... 230 4e-59 UniRef50_Q30XG7 Conserved hypothetical transcriptional regulator... 230 5e-59 UniRef50_B8KMT5 Transcriptional regulator, LysR family n=1 Tax=g... 230 6e-59 UniRef50_A5F4D9 Transcriptional regulator, LysR family n=68 Tax=... 230 6e-59 UniRef50_UPI0001745DD5 transcriptional regulator, LysR family pr... 230 6e-59 UniRef50_A6VSJ2 Transcriptional regulator, LysR family n=28 Tax=... 230 6e-59 UniRef50_A3QJ07 Transcriptional regulator, LysR family n=25 Tax=... 229 7e-59 UniRef50_A5VEA0 Transcriptional regulator, LysR family n=1 Tax=S... 229 8e-59 UniRef50_B0C7Y6 Transcriptional regulator, LysR family n=1 Tax=A... 229 1e-58 UniRef50_Q2IYM8 Transcriptional regulator, LysR family n=2 Tax=R... 229 1e-58 UniRef50_B6JAE3 MexT protein n=1 Tax=Oligotropha carboxidovorans... 229 1e-58 UniRef50_D1RUJ7 Transcriptional regulatory protein n=1 Tax=Serra... 229 1e-58 UniRef50_Q7N4W1 Hca operon transcriptional activator n=2 Tax=Pho... 229 1e-58 UniRef50_Q1R0T8 Transcriptional regulator, LysR family n=9 Tax=G... 229 1e-58 UniRef50_Q3JR86 LysR-family regultor n=70 Tax=Proteobacteria Rep... 229 1e-58 UniRef50_A6EW06 Transcriptional regulator n=2 Tax=Marinobacter R... 229 1e-58 UniRef50_A8GG55 Transcriptional regulator, LysR family n=1 Tax=S... 228 2e-58 UniRef50_B7RZY7 LysR substrate binding domain protein n=1 Tax=ma... 228 2e-58 UniRef50_Q08NF6 Transcriptional Regulator, LysR family n=1 Tax=S... 228 2e-58 UniRef50_Q13YH7 Transcriptional regulator, LysR family n=12 Tax=... 228 2e-58 UniRef50_Q46WQ0 Transcriptional regulator, LysR family n=1 Tax=R... 228 2e-58 UniRef50_Q39AY8 Transcriptional regulator, LysR family n=1 Tax=B... 228 3e-58 UniRef50_C0ZCK2 Transcriptional regulator n=1 Tax=Brevibacillus ... 228 3e-58 UniRef50_Q5LKP3 Transcriptional regulator, LysR family n=1 Tax=R... 227 3e-58 UniRef50_C2BX95 Transcriptional regulator n=1 Tax=Listeria grayi... 227 3e-58 UniRef50_A3Y808 Transcriptional regulator, LysR family protien n... 227 3e-58 UniRef50_Q89IY7 Transcriptional regulatory protein n=1 Tax=Brady... 227 4e-58 UniRef50_B5JQV8 LysR substrate binding domain protein n=1 Tax=Ve... 227 4e-58 UniRef50_A9FB16 Transcriptional regulator, LysR family n=3 Tax=S... 227 5e-58 UniRef50_A6VUW1 Transcriptional regulator, LysR family n=2 Tax=M... 227 6e-58 UniRef50_Q0SCY7 Transcriptional regulator, LysR family protein n... 226 6e-58 UniRef50_C6DDI5 Transcriptional regulator, LysR family n=4 Tax=E... 226 7e-58 UniRef50_Q475G5 Regulatory protein, LysR:LysR, substrate-binding... 226 7e-58 UniRef50_C0ZI27 Transcriptional regulator n=1 Tax=Brevibacillus ... 226 9e-58 UniRef50_Q0K6D4 Transcriptional regulator, LysR-family n=2 Tax=C... 226 1e-57 UniRef50_D0LKM3 Transcriptional regulator, LysR family n=1 Tax=H... 225 1e-57 UniRef50_C0CQ02 Putative uncharacterized protein n=1 Tax=Blautia... 225 1e-57 UniRef50_B8KV86 Putative transcriptional regulator, LysR family ... 225 1e-57 UniRef50_A0KKG7 HTH-type transcriptional regulator YidZ n=3 Tax=... 225 1e-57 UniRef50_C9KJ25 Transcriptional regulator GltC n=1 Tax=Mitsuokel... 225 1e-57 UniRef50_A0LD87 Transcriptional regulator, LysR family n=1 Tax=M... 225 2e-57 UniRef50_Q8XRG7 Probable transcriptional regulator transcription... 225 2e-57 UniRef50_C8WSN1 Transcriptional regulator, LysR family n=1 Tax=A... 225 2e-57 UniRef50_D1P3H6 Transcriptional regulator, LysR family n=1 Tax=P... 224 3e-57 UniRef50_A4SSQ1 Transcriptional regulator, LysR family n=2 Tax=A... 224 3e-57 UniRef50_Q1N663 Regulatory protein, LysR:LysR, substrate-binding... 224 3e-57 UniRef50_Q1IRZ3 Transcriptional regulator, LysR family n=1 Tax=C... 224 3e-57 UniRef50_Q0VLU8 Transcriptional regulator, LysR family n=2 Tax=A... 224 4e-57 UniRef50_B9JQ31 Transcriptional regulator n=1 Tax=Agrobacterium ... 224 5e-57 UniRef50_A1UXD8 Transcriptional regulator, LysR family n=41 Tax=... 224 5e-57 UniRef50_B7CP85 Transcriptional regulator, LysR family protein n... 224 5e-57 UniRef50_Q1MWN1 LysR-type regulatory protein n=1 Tax=Sphingomona... 224 5e-57 UniRef50_B5JN19 Putative uncharacterized protein n=1 Tax=Verruco... 223 5e-57 UniRef50_Q393U0 Transcriptional regulator, LysR family n=6 Tax=B... 223 6e-57 UniRef50_B2JFW9 Transcriptional regulator, LysR family n=39 Tax=... 223 6e-57 UniRef50_B5XYZ1 Transcriptional regulator, LysR family n=5 Tax=K... 223 7e-57 UniRef50_Q1XGL2 Transcriptional activator NahR n=3 Tax=root RepI... 223 7e-57 UniRef50_Q7WCW0 Probable LysR-family transcriptional regulator n... 223 7e-57 UniRef50_C4UEX0 Lys-R type regulatory protein n=1 Tax=Yersinia r... 223 8e-57 UniRef50_Q2G901 Transcriptional regulator, LysR family n=2 Tax=A... 222 1e-56 UniRef50_Q2BJ61 Transcriptional regulator, LysR family protein n... 222 1e-56 UniRef50_C9PC13 Transcriptional regulator LysR family n=1 Tax=Vi... 222 1e-56 UniRef50_A7ZAS3 YybE n=1 Tax=Bacillus amyloliquefaciens FZB42 Re... 222 1e-56 UniRef50_B5CN01 Putative uncharacterized protein n=2 Tax=Bacteri... 222 1e-56 UniRef50_A4FE82 LysR-family transcriptional regulator n=5 Tax=Ac... 222 1e-56 UniRef50_C1F7X5 Transcriptional regulator, LysR family n=1 Tax=A... 222 2e-56 UniRef50_A0QNN2 Transcriptional regulator, LysR family protein n... 222 2e-56 UniRef50_C6C982 Transcriptional regulator, LysR family n=1 Tax=D... 222 2e-56 UniRef50_A9WGB3 LysR substrate-binding n=2 Tax=Chloroflexus RepI... 222 2e-56 UniRef50_C7I3E5 Transcriptional regulator, LysR family n=1 Tax=T... 222 2e-56 UniRef50_Q15TE0 Transcriptional regulator, LysR family n=4 Tax=A... 222 2e-56 UniRef50_A4ISN4 Transcriptional regulator LysR family n=6 Tax=Ge... 221 2e-56 UniRef50_A1U8Q8 Transcriptional regulator, LysR family n=1 Tax=M... 221 2e-56 UniRef50_Q2BMZ3 Putative transcriptional regulator, LysR family ... 221 2e-56 UniRef50_C7RKX8 Transcriptional regulator, LysR family n=20 Tax=... 221 2e-56 UniRef50_D1TCI7 LysR family transcriptional regulator n=2 Tax=Bu... 221 2e-56 UniRef50_Q122V6 Transcriptional regulator, LysR family n=3 Tax=C... 221 2e-56 UniRef50_P27111 HTH-type transcriptional regulator cynR n=108 Ta... 221 2e-56 UniRef50_C4ZHT7 Transcription activator of glutamate synthase(Ly... 221 3e-56 UniRef50_Q8YZV2 Transcriptional regulator n=2 Tax=Nostocaceae Re... 221 3e-56 UniRef50_Q47141 Hca operon transcriptional activator n=46 Tax=Ga... 221 3e-56 UniRef50_C0ZNV8 Putative LysR family transcriptional regulator n... 221 3e-56 UniRef50_A1SY80 Transcriptional regulator, LysR family n=1 Tax=P... 220 3e-56 UniRef50_D0RY94 Transcriptional regulator n=4 Tax=Acinetobacter ... 220 3e-56 UniRef50_A7HRT9 Transcriptional regulator, LysR family n=1 Tax=P... 220 4e-56 UniRef50_A5WDE8 Transcriptional regulator, LysR family n=1 Tax=P... 220 4e-56 UniRef50_A0JW92 Transcriptional regulator, LysR family n=3 Tax=M... 220 4e-56 UniRef50_A4F7Y9 Transcriptional regulator, LysR family n=3 Tax=A... 220 4e-56 UniRef50_B0C4T0 Transcriptional regulator, LysR family n=1 Tax=A... 220 4e-56 UniRef50_A1VMI6 Transcriptional regulator, LysR family n=28 Tax=... 220 5e-56 UniRef50_B4WMZ4 Putative uncharacterized protein n=1 Tax=Synecho... 220 5e-56 UniRef50_C5AL93 Transcriptional regulator, LysR family protein n... 220 7e-56 UniRef50_Q1IHL3 Transcriptional regulator, LysR family n=1 Tax=C... 220 7e-56 UniRef50_B7VQV6 Transcriptional regulator n=10 Tax=Vibrionales R... 220 7e-56 UniRef50_Q46MA3 Transcriptional regulator, LysR family n=1 Tax=R... 220 7e-56 UniRef50_A6VV39 Transcriptional regulator, LysR family n=6 Tax=G... 219 8e-56 UniRef50_C8WUA0 Transcriptional regulator, LysR family n=1 Tax=A... 219 8e-56 UniRef50_Q0KE24 Transcriptional regulator, LysR-family n=2 Tax=C... 219 8e-56 UniRef50_C1DGS2 Transcriptinal regulator, LysR family n=1 Tax=Az... 219 8e-56 UniRef50_Q7MFJ9 Transcriptional regulator n=28 Tax=Vibrio RepID=... 219 1e-55 UniRef50_A9GGP1 LysR-family transcriptional regulator n=1 Tax=So... 219 1e-55 UniRef50_B9KVK0 Transcriptional regulator, LysR family n=1 Tax=R... 219 1e-55 UniRef50_C3LMU4 Transcriptional regulator, LysR family n=65 Tax=... 219 1e-55 UniRef50_A4XX96 Transcriptional regulator, LysR family n=3 Tax=P... 219 1e-55 UniRef50_A9AQX4 Transcriptional regulator, LysR family n=20 Tax=... 219 1e-55 UniRef50_A1UYG7 Transcriptional regulator, LysR family n=45 Tax=... 219 1e-55 UniRef50_Q9FD34 PnbR n=2 Tax=Pseudomonas RepID=Q9FD34_PSEPU 219 1e-55 UniRef50_UPI000178812A transcriptional regulator, LysR family n=... 219 1e-55 UniRef50_A3YHF6 Transcriptional regulatory protein n=2 Tax=Gamma... 219 2e-55 UniRef50_D2YJX0 Transcriptional regulator, LysR family n=1 Tax=V... 218 2e-55 UniRef50_A6FYP7 Transcriptional regulator, LysR family protein n... 218 2e-55 UniRef50_A0KH33 Transcriptional regulator, LysR family n=2 Tax=A... 218 2e-55 UniRef50_Q13GK2 Transcriptional regulator, LysR family n=1 Tax=B... 218 2e-55 UniRef50_A8GZD3 Transcriptional regulator, LysR family n=22 Tax=... 218 2e-55 UniRef50_Q2CCM2 Transcriptional regulator, LysR family protein n... 218 2e-55 UniRef50_C6D0V7 Transcriptional regulator, LysR family n=4 Tax=B... 218 2e-55 UniRef50_B1ZUQ0 Transcriptional regulator, LysR family n=1 Tax=O... 218 2e-55 UniRef50_Q210Z5 Transcriptional regulator, LysR family n=2 Tax=A... 218 2e-55 UniRef50_Q4KHX1 Transcriptional regulator, LysR family n=1 Tax=P... 218 2e-55 UniRef50_C9KJX6 Transcriptional regulator, LysR family n=2 Tax=V... 218 2e-55 UniRef50_A1WRQ7 Transcriptional regulator, LysR family n=2 Tax=B... 218 3e-55 UniRef50_B2JVU4 Transcriptional regulator, LysR family n=43 Tax=... 218 3e-55 UniRef50_Q88I06 Nodulation protein d1 n=4 Tax=Gammaproteobacteri... 217 3e-55 UniRef50_Q5LN55 Transcriptional regulator, LysR family n=4 Tax=R... 217 3e-55 UniRef50_Q4ZQQ6 Regulatory protein, LysR:LysR, substrate-binding... 217 3e-55 UniRef50_A6CYZ8 Hypothetical transcriptional regulator, LysR fam... 217 3e-55 UniRef50_C4Z2A4 LysR family transcriptional regulator, transcrip... 217 4e-55 UniRef50_B5JUQ0 Transcriptional regulator, LysR family, putative... 217 4e-55 UniRef50_A0KIB7 Transcriptional regulator, LysR family n=2 Tax=A... 217 4e-55 UniRef50_Q9RBI3 SalR n=2 Tax=Acinetobacter RepID=Q9RBI3_ACIAD 217 4e-55 UniRef50_B9XBB1 Transcriptional regulator, LysR family n=2 Tax=V... 217 4e-55 UniRef50_C6PMR8 Transcriptional regulator, LysR family n=1 Tax=C... 217 5e-55 UniRef50_Q7NT25 Probable transcription regulator protein n=1 Tax... 217 5e-55 UniRef50_A6SW66 Transcriptional regulator, LysR family n=1 Tax=J... 217 5e-55 UniRef50_C1PEC2 Transcriptional regulator, LysR family n=1 Tax=B... 217 6e-55 UniRef50_A5VCH0 Transcriptional regulator, LysR family n=1 Tax=S... 217 6e-55 UniRef50_P52679 PCP degradation transcriptional activation prote... 216 6e-55 UniRef50_A3VWI6 Transcriptional regulatory protein n=1 Tax=Roseo... 216 6e-55 UniRef50_A3X6E2 Transcriptional regulatory protein n=1 Tax=Roseo... 216 7e-55 UniRef50_B9TDR3 HTH-type transcriptional regulator xapR, putativ... 216 8e-55 UniRef50_UPI0000383CFA COG0583: Transcriptional regulator n=1 Ta... 216 8e-55 UniRef50_A2SDX3 Transcriptional regulator, LysR family n=6 Tax=B... 216 9e-55 UniRef50_D1BNW2 Transcriptional regulator, LysR family n=4 Tax=V... 216 9e-55 UniRef50_B9Z7Z3 Transcriptional regulator, LysR family n=3 Tax=P... 216 1e-54 UniRef50_C4I668 Transcriptional regulator, LysR family n=80 Tax=... 216 1e-54 UniRef50_C2LG43 LysR-family transcriptional regulator n=4 Tax=En... 216 1e-54 UniRef50_D1WWA8 Transcriptional regulator, LysR family n=7 Tax=S... 216 1e-54 UniRef50_C6BS61 Transcriptional regulator, LysR family n=1 Tax=D... 216 1e-54 UniRef50_C0F0J2 Putative uncharacterized protein n=1 Tax=Eubacte... 216 1e-54 UniRef50_A3K7Z5 Regulatory protein, LysR:LysR, substrate-binding... 215 1e-54 UniRef50_C6XZC9 LysR substrate-binding n=1 Tax=Pedobacter hepari... 215 1e-54 UniRef50_A3VLP1 LysR family transcriptional regulatory protein n... 215 1e-54 UniRef50_C7PVI0 Transcriptional regulator, LysR family n=11 Tax=... 215 1e-54 UniRef50_B9KYF2 RuBisCO operon transcriptional regulator n=1 Tax... 215 1e-54 UniRef50_Q5WCI6 LysR family transcriptional activator of glutama... 215 1e-54 UniRef50_A7ZAT2 Putative HTH-type transcriptional regulator n=2 ... 215 1e-54 UniRef50_A8H854 Transcriptional regulator, LysR family n=1 Tax=S... 215 1e-54 UniRef50_Q7MCZ8 Transcriptional regulator n=13 Tax=Vibrionaceae ... 215 1e-54 UniRef50_B6RAE8 Transcriptional Regulator, LysR family n=1 Tax=P... 215 1e-54 UniRef50_Q0BYJ0 Transcriptional regulator, LysR family n=1 Tax=H... 215 2e-54 UniRef50_Q3M2K4 Transcriptional regulator, LysR family n=5 Tax=C... 215 2e-54 UniRef50_C6BXQ9 Transcriptional regulator, LysR family n=1 Tax=D... 215 2e-54 UniRef50_B7RYN1 Transcriptional regulator, LysR family protein n... 215 2e-54 UniRef50_B2I0F8 Transcriptional regulator n=13 Tax=Acinetobacter... 215 2e-54 UniRef50_Q2J7C4 Transcriptional regulator, LysR family n=22 Tax=... 215 2e-54 UniRef50_Q1YUD1 Probable transcriptional regulator n=1 Tax=gamma... 215 2e-54 UniRef50_A9B3V4 Transcriptional regulator, LysR family n=1 Tax=H... 215 2e-54 UniRef50_Q12AP3 Transcriptional regulator, LysR family n=4 Tax=B... 215 2e-54 UniRef50_C6D0W9 Transcriptional regulator, LysR family n=1 Tax=P... 215 2e-54 UniRef50_B5WR38 Transcriptional regulator, LysR family n=2 Tax=B... 215 2e-54 UniRef50_D1VD43 Transcriptional regulator, LysR family n=1 Tax=F... 214 2e-54 UniRef50_A1UYR8 Transcriptional regulator, LysR family n=32 Tax=... 214 3e-54 UniRef50_C5BQI4 Transcriptional regulator, LysR family n=1 Tax=T... 214 3e-54 UniRef50_A6X639 Transcriptional regulator, LysR family n=1 Tax=O... 214 3e-54 UniRef50_C5CZY6 Transcriptional regulator, LysR family n=1 Tax=V... 214 3e-54 UniRef50_Q88LJ0 Transcriptional regulator, LysR family n=1 Tax=P... 214 3e-54 UniRef50_B7RV99 Transcriptional regulator, LysR family protein n... 214 3e-54 UniRef50_C7RD08 Transcriptional regulator, LysR family n=1 Tax=K... 214 3e-54 UniRef50_B7X0F3 Transcriptional regulator, LysR family n=1 Tax=C... 214 3e-54 UniRef50_Q1AYT0 Transcriptional regulator, LysR family n=1 Tax=R... 214 3e-54 UniRef50_A1U796 Transcriptional regulator, LysR family n=3 Tax=M... 214 3e-54 UniRef50_Q7MEK1 Transcriptional regulator n=15 Tax=Vibrionaceae ... 214 3e-54 UniRef50_B5XVV4 Transcriptional regulator cynR n=5 Tax=Enterobac... 214 4e-54 UniRef50_A9WIA6 LysR substrate-binding n=4 Tax=Chloroflexaceae R... 214 4e-54 UniRef50_A0JW61 Transcriptional regulator, LysR family n=1 Tax=A... 214 4e-54 UniRef50_UPI0001C3192A transcriptional regulator, LysR family n=... 214 4e-54 UniRef50_Q31FC6 Transcriptional regulator, LysR family n=7 Tax=P... 214 4e-54 UniRef50_B4ELV6 LysR family regulatory protein n=1 Tax=Burkholde... 214 5e-54 UniRef50_A3KIZ0 Putative LysR-family transcriptional regulatory ... 214 5e-54 UniRef50_Q826F8 Putative LysR-family transcriptional regulator n... 213 5e-54 UniRef50_UPI00016945D8 transcriptional regulator, LysR family pr... 213 6e-54 UniRef50_B9Y467 Putative uncharacterized protein n=1 Tax=Holdema... 213 6e-54 UniRef50_Q67SW7 LysR family transcriptional regulator n=1 Tax=Sy... 213 6e-54 UniRef50_B1HQK1 HTH-type transcriptional regulator n=3 Tax=Bacil... 213 6e-54 UniRef50_UPI0001694914 Transcriptional Regulator, LysR family pr... 213 7e-54 UniRef50_C5CZA2 Transcriptional regulator, LysR family n=1 Tax=V... 213 7e-54 UniRef50_A7JRS0 Possible LysR family transcriptional regulator n... 213 7e-54 UniRef50_Q2RHB2 Transcriptional regulator, LysR family n=1 Tax=M... 213 8e-54 UniRef50_Q1AVR3 Transcriptional regulator, LysR family n=1 Tax=R... 213 8e-54 UniRef50_B8IJK2 Transcriptional regulator, LysR family n=1 Tax=M... 213 8e-54 UniRef50_Q1IRM1 Transcriptional regulator, LysR family n=1 Tax=C... 213 8e-54 UniRef50_A7K354 LysR substrate binding domain protein n=17 Tax=G... 213 8e-54 UniRef50_A0L4T1 Transcriptional regulator, LysR family n=2 Tax=P... 213 9e-54 UniRef50_Q687Z9 LysR-type activator n=1 Tax=Sphingopyxis macrogo... 213 9e-54 UniRef50_A0R3Z8 Transcriptional regulator, LysR family protein n... 213 9e-54 UniRef50_D0FZR1 LysR-type transcriptional regulator n=2 Tax=Rhod... 213 9e-54 UniRef50_C1M4D9 Putative uncharacterized protein n=2 Tax=Citroba... 213 9e-54 UniRef50_C8T378 LysR family transcriptional regulator n=1 Tax=Kl... 213 9e-54 UniRef50_Q87I72 Putative transcriptional regulator, LysR family ... 212 9e-54 UniRef50_B7V4S2 Probable transcriptional regulator n=7 Tax=Pseud... 212 9e-54 UniRef50_Q2RHG4 Transcriptional regulator, LysR family n=1 Tax=M... 212 1e-53 UniRef50_A9C385 Transcriptional regulator, LysR family n=2 Tax=c... 212 1e-53 UniRef50_D1P5Q9 Transcriptional regulator, LysR family n=1 Tax=P... 212 1e-53 UniRef50_B5GYU9 LysR-family transcriptional regulator (Fragment)... 212 1e-53 UniRef50_C0Z4V5 Transcriptional regulator n=1 Tax=Brevibacillus ... 212 1e-53 UniRef50_A4SH82 Transcriptional regulator, LysR family n=2 Tax=A... 212 1e-53 UniRef50_Q5ZSZ0 Transcriptional regulator, LysR family n=4 Tax=L... 212 1e-53 UniRef50_UPI0001744D79 transcriptional regulator, LysR family pr... 212 1e-53 UniRef50_Q7MQI2 Transcriptional regulator n=36 Tax=Gammaproteoba... 212 1e-53 UniRef50_A1TN88 Transcriptional regulator, LysR family n=9 Tax=B... 212 1e-53 UniRef50_B0MH18 Putative uncharacterized protein n=4 Tax=Bacteri... 212 1e-53 UniRef50_Q2KYC5 LysR-family transcriptional regulator n=9 Tax=Bu... 212 1e-53 UniRef50_D1SW87 Transcriptional regulator, LysR family n=1 Tax=A... 212 1e-53 UniRef50_Q15XJ4 Transcriptional regulator, LysR family n=1 Tax=P... 212 1e-53 UniRef50_Q39IT2 Transcriptional regulator, LysR family n=8 Tax=B... 212 1e-53 UniRef50_A6UMN5 Transcriptional regulator, LysR family n=1 Tax=S... 212 1e-53 UniRef50_C6CWT6 Transcriptional regulator, LysR family n=5 Tax=B... 212 1e-53 UniRef50_Q632J2 Transcriptional regulator, LysR family n=5 Tax=B... 212 1e-53 UniRef50_C6J497 Transcriptional regulator n=1 Tax=Paenibacillus ... 212 2e-53 UniRef50_Q081Z6 Transcriptional regulator, LysR family n=1 Tax=S... 212 2e-53 UniRef50_C9PFK4 Transcriptional regulator substrate-binding of L... 212 2e-53 UniRef50_A4J6T9 Transcriptional regulator, LysR family n=1 Tax=D... 212 2e-53 UniRef50_Q67NJ1 LysR family transcriptional regulator n=1 Tax=Sy... 212 2e-53 UniRef50_A9R140 Substrate-binding transcriptional regulator, Lys... 212 2e-53 UniRef50_C7H9N7 Transcriptional regulator, LysR family n=2 Tax=F... 212 2e-53 UniRef50_C1F961 Transcriptional regulator, LysR family n=1 Tax=A... 212 2e-53 UniRef50_Q7W708 Putative LysR-family transcriptional regulator n... 212 2e-53 UniRef50_P52696 Uncharacterized HTH-type transcriptional regulat... 211 2e-53 UniRef50_A9F7Y4 Transcriptional regulator, LysR family n=1 Tax=S... 211 2e-53 UniRef50_A4GJC2 Transcriptional regulator LysR family protein n=... 211 2e-53 UniRef50_A0K8T5 Transcriptional regulator, LysR family n=55 Tax=... 211 3e-53 UniRef50_Q7MC61 Transcriptional regulator n=9 Tax=Gammaproteobac... 211 3e-53 UniRef50_A6WDF3 Transcriptional regulator, LysR family n=1 Tax=K... 211 3e-53 UniRef50_C3BJ72 YwqM (Probable transcriptional regulator YwqM) n... 211 3e-53 UniRef50_D2Q131 Transcriptional regulator, LysR family n=1 Tax=K... 211 3e-53 UniRef50_Q7WNC1 LysR-family transcriptional regulator n=1 Tax=Bo... 211 3e-53 UniRef50_C4V4C8 Transcriptional regulator n=2 Tax=Selenomonas Re... 211 3e-53 UniRef50_A6FY23 Transcriptional regulator, LysR family protein n... 210 3e-53 UniRef50_A0KG94 Transcriptional regulator, LysR family n=5 Tax=G... 210 4e-53 UniRef50_C8WRL7 Transcriptional regulator, LysR family n=2 Tax=A... 210 4e-53 UniRef50_A6SVA6 Transcriptional regulator, LysR family n=1 Tax=J... 210 4e-53 UniRef50_C9YBM2 Putative uncharacterized protein n=2 Tax=cellula... 210 4e-53 UniRef50_C0Z7P7 Probable transcriptional regulator n=1 Tax=Brevi... 210 4e-53 UniRef50_C1A9Z7 LysR family transcriptional regulator n=1 Tax=Ge... 210 4e-53 UniRef50_B7QWJ8 Transcriptional regulator, LysR family n=1 Tax=R... 210 4e-53 UniRef50_A1WVW1 Transcriptional regulator, LysR family n=11 Tax=... 210 4e-53 UniRef50_B0N992 Putative uncharacterized protein n=2 Tax=Clostri... 210 5e-53 UniRef50_B4SSL0 Transcriptional regulator, LysR family n=8 Tax=X... 210 5e-53 UniRef50_Q3MEY8 Transcriptional regulator, LysR family n=1 Tax=A... 210 5e-53 UniRef50_A5VFC0 Transcriptional regulator, LysR family n=2 Tax=P... 210 5e-53 UniRef50_P25544 RuBisCO operon transcriptional regulator n=13 Ta... 210 5e-53 UniRef50_A8TNA4 Transcriptional regulator MexT n=1 Tax=alpha pro... 210 5e-53 UniRef50_A3TPW4 Putative transcriptional regulator n=1 Tax=Janib... 210 6e-53 UniRef50_A3RSL5 Transcriptional regulators, LysR family n=4 Tax=... 210 6e-53 UniRef50_D2C014 Transcriptional regulator, LysR family n=1 Tax=D... 210 6e-53 UniRef50_C1ZI46 Transcriptional regulator, COG0583 n=1 Tax=Planc... 210 6e-53 UniRef50_A0LNI4 Transcriptional regulator, LysR family n=4 Tax=D... 210 6e-53 UniRef50_O68014 HTH-type transcriptional regulator benM n=12 Tax... 210 6e-53 UniRef50_B1Z4Z1 Transcriptional regulator, LysR family n=5 Tax=P... 210 6e-53 UniRef50_A6GJJ5 Regulatory protein, LysR:LysR, substrate-binding... 210 6e-53 UniRef50_A9FJR3 Transcriptional regulator, LysR family n=2 Tax=S... 210 7e-53 UniRef50_A3UQR4 Transcriptional regulator, LysR family n=1 Tax=V... 210 7e-53 UniRef50_B7VJC4 Putative LysR-like regular protein n=4 Tax=Vibri... 210 7e-53 UniRef50_B2T3Y4 Transcriptional regulator, LysR family n=3 Tax=B... 210 7e-53 UniRef50_A0QTM3 HTH-type transcriptional regulator AlsR n=7 Tax=... 210 7e-53 UniRef50_C7I2X4 Transcriptional regulator, LysR family n=1 Tax=T... 210 7e-53 UniRef50_A6SUU1 OxyR hydrogen peroxide-inducible genes activator... 210 8e-53 UniRef50_Q46T42 Regulatory protein, LysR:LysR, substrate-binding... 209 8e-53 UniRef50_Q2SKI3 Transcriptional regulator n=3 Tax=Oceanospirilla... 209 8e-53 UniRef50_Q4KE95 Transcriptional regulator, LysR family n=7 Tax=P... 209 8e-53 UniRef50_Q67KY5 LysR family transcriptional regulator n=1 Tax=Sy... 209 9e-53 UniRef50_A6W028 Transcriptional regulator, LysR family n=1 Tax=M... 209 9e-53 UniRef50_Q46PT5 Transcriptional regulator, LysR family n=1 Tax=R... 209 9e-53 UniRef50_A0NXF9 Probable transcription regulator protein n=2 Tax... 209 1e-52 UniRef50_Q1ATU8 Transcriptional regulator, LysR family n=1 Tax=R... 209 1e-52 UniRef50_A6VZS6 Transcriptional regulator, LysR family n=4 Tax=G... 209 1e-52 UniRef50_B1K4K0 Transcriptional regulator, LysR family n=3 Tax=B... 209 1e-52 UniRef50_B6AU51 Transcriptional regulator, LysR family, putative... 209 1e-52 UniRef50_A5F3E5 Transcriptional regulator, LysR family n=29 Tax=... 209 1e-52 UniRef50_A5W321 Transcriptional regulator, LysR family n=3 Tax=P... 209 1e-52 UniRef50_D0LUZ7 Transcriptional regulator, LysR family n=1 Tax=H... 209 1e-52 UniRef50_Q7W9G9 Probable LysR-family transcriptional regulator n... 209 1e-52 UniRef50_Q7MCM8 Transcriptional regulator n=8 Tax=Vibrionaceae R... 209 1e-52 UniRef50_Q471I4 Regulatory protein, LysR:LysR, substrate-binding... 209 1e-52 UniRef50_A3YI62 Transcriptional regulator, LysR family protein n... 209 1e-52 UniRef50_P77559 Uncharacterized HTH-type transcriptional regulat... 209 1e-52 UniRef50_B6AZI7 Transcriptional regulator, LysR family n=1 Tax=R... 209 1e-52 UniRef50_Q7D3I0 Transcriptional regulator, LysR family n=1 Tax=A... 209 2e-52 UniRef50_Q4ZY05 Regulatory protein, LysR:LysR, substrate-binding... 209 2e-52 UniRef50_Q1M9F6 Putative LysR-family transcriptional regulator n... 209 2e-52 UniRef50_B9B1S8 Transcriptional regulator, LysR family n=1 Tax=B... 209 2e-52 UniRef50_Q5X4A2 Hydrogen peroxide-inducible genes activator n=4 ... 208 2e-52 UniRef50_C5BDD2 HTH-type transcriptional regulator AlsR n=2 Tax=... 208 2e-52 UniRef50_Q399F7 Transcriptional regulator, LysR family n=1 Tax=B... 208 2e-52 UniRef50_A3Y6R5 Transcriptional regulator, LysR family protein n... 208 2e-52 UniRef50_Q11BY5 Transcriptional regulator, LysR family n=1 Tax=C... 208 2e-52 UniRef50_B1J8H5 Transcriptional regulator, LysR family n=5 Tax=P... 208 2e-52 UniRef50_UPI000178A8A2 transcriptional regulator, LysR family n=... 208 2e-52 UniRef50_P0ACR7 Uncharacterized HTH-type transcriptional regulat... 208 2e-52 UniRef50_Q7NKC0 Nitrogen assimilation transcriptional activator ... 208 2e-52 UniRef50_D2B6V0 LysR family transcriptional regulator n=5 Tax=Ac... 208 2e-52 UniRef50_A6ARN3 Transcriptional regulator, LysR family n=4 Tax=V... 208 2e-52 UniRef50_C0BJQ2 Transcriptional regulator, LysR family n=1 Tax=F... 208 2e-52 UniRef50_C4L1Y9 Transcriptional regulator, LysR family n=2 Tax=E... 208 2e-52 UniRef50_Q15Y73 Transcriptional regulator, LysR family n=1 Tax=P... 208 2e-52 UniRef50_B5ELK2 Transcriptional regulator, LysR family n=2 Tax=A... 208 3e-52 UniRef50_A9BUT0 Transcriptional regulator, LysR family n=5 Tax=C... 208 3e-52 UniRef50_A1W2B9 Transcriptional regulator, LysR family n=6 Tax=C... 208 3e-52 UniRef50_Q28M96 Transcriptional regulator, LysR family n=3 Tax=R... 208 3e-52 UniRef50_Q1GX89 Transcriptional regulator, LysR family n=13 Tax=... 208 3e-52 UniRef50_C6XR04 Transcriptional regulator, LysR family n=1 Tax=H... 208 3e-52 UniRef50_A3VAM0 Nodulation protein d1 n=1 Tax=Rhodobacterales ba... 207 3e-52 UniRef50_A9BVL3 Transcriptional regulator, LysR family n=3 Tax=C... 207 3e-52 UniRef50_A8IJ97 Putative transcriptional regulator n=1 Tax=Azorh... 207 3e-52 UniRef50_A1K8D7 Transcriptional regulator, LysR family n=1 Tax=A... 207 3e-52 UniRef50_B9XJ57 Transcriptional regulator, LysR family n=2 Tax=b... 207 3e-52 UniRef50_Q21S72 Transcriptional regulator, LysR family n=2 Tax=C... 207 3e-52 UniRef50_Q3SGH4 Oxidative stress transcriptional regulator n=2 T... 207 4e-52 UniRef50_B1Y5W5 Transcriptional regulator, LysR family n=2 Tax=B... 207 4e-52 UniRef50_A6VX33 Transcriptional regulator, LysR family n=2 Tax=M... 207 4e-52 UniRef50_Q127N6 Transcriptional regulator, LysR family n=1 Tax=P... 207 4e-52 UniRef50_A6UGP0 Transcriptional regulator, LysR family n=2 Tax=S... 207 4e-52 UniRef50_A1W235 Transcriptional regulator, LysR family n=6 Tax=B... 207 4e-52 UniRef50_Q11CG0 Transcriptional regulator, LysR family n=1 Tax=C... 207 4e-52 UniRef50_B2JTT0 Transcriptional regulator, LysR family n=3 Tax=B... 207 4e-52 UniRef50_C4DMI0 Transcriptional regulator, COG0583 n=2 Tax=Actin... 207 4e-52 UniRef50_B1MJW3 Putative transcriptional regulator, LysR family ... 207 4e-52 UniRef50_B7VQ63 Transcriptional regulators, LysR family n=3 Tax=... 207 4e-52 UniRef50_Q97DV9 Transcriptional regulator, LysR family n=1 Tax=C... 207 4e-52 UniRef50_Q1IX51 Transcriptional regulator, LysR family n=3 Tax=D... 207 4e-52 UniRef50_A0K340 Transcriptional regulator, LysR family n=1 Tax=B... 207 5e-52 UniRef50_B2Q0Q6 Putative uncharacterized protein n=1 Tax=Provide... 207 5e-52 UniRef50_Q7WJY9 Probable LysR-family transcription regulator n=1... 207 5e-52 UniRef50_A6F7C1 Transcriptional regulator n=1 Tax=Moritella sp. ... 207 5e-52 UniRef50_Q5E2I6 DNA-binding transcriptional activator n=65 Tax=G... 207 5e-52 UniRef50_B2JL76 Transcriptional regulator, LysR family n=10 Tax=... 207 5e-52 UniRef50_A6ULR6 Transcriptional regulator, LysR family n=1 Tax=S... 207 6e-52 UniRef50_A6GDN8 Transcriptional regulator n=1 Tax=Plesiocystis p... 207 6e-52 UniRef50_B0TNB6 Transcriptional regulator, LysR family n=19 Tax=... 207 6e-52 UniRef50_A8GI93 Transcriptional regulator, LysR family n=3 Tax=E... 207 6e-52 UniRef50_A1WMY5 Transcriptional regulator, LysR family n=1 Tax=V... 206 7e-52 UniRef50_B8CTJ9 Regulatory protein, LysR:LysR, substrate-binding... 206 7e-52 UniRef50_P73123 Probable RuBisCO transcriptional regulator n=81 ... 206 7e-52 UniRef50_C3NNS3 LysR family regulatory protein CidR n=22 Tax=Vib... 206 7e-52 UniRef50_Q4FSR3 Transcriptional regulator, LysR family n=3 Tax=G... 206 7e-52 UniRef50_Q74DH4 Transcriptional regulator, LysR family n=1 Tax=G... 206 7e-52 UniRef50_A4XTW7 Transcriptional regulator, LysR family n=1 Tax=P... 206 7e-52 UniRef50_Q9F1R2 HTH-type transcriptional activator cmpR n=38 Tax... 206 8e-52 UniRef50_Q5QVJ9 Transcriptional regulator, LysR family n=1 Tax=I... 206 8e-52 UniRef50_Q5NYN4 Transcriptional regulator n=4 Tax=Rhodocyclaceae... 206 8e-52 UniRef50_B6R6F6 Transcriptional regulator, LysR family n=1 Tax=P... 206 8e-52 UniRef50_C0WB23 Transcriptional regulator n=1 Tax=Acidaminococcu... 206 8e-52 UniRef50_Q2CK92 Transcriptional regulator, LysR family protein n... 206 8e-52 UniRef50_Q2T940 Transcriptional regulator, LysR family n=6 Tax=B... 206 8e-52 UniRef50_C3JEG8 Transcriptional regulator, LysR family protein n... 206 8e-52 UniRef50_B4RWU1 Transcriptional regulator n=2 Tax=Alteromonas ma... 206 9e-52 UniRef50_C6B2W9 Transcriptional regulator, LysR family n=4 Tax=R... 206 9e-52 UniRef50_A6W2N0 Transcriptional regulator, LysR family n=1 Tax=M... 206 9e-52 UniRef50_Q46MT9 Regulatory protein, LysR:LysR, substrate-binding... 206 9e-52 UniRef50_D0YA85 Transcriptional regulator, LysR family n=5 Tax=K... 206 1e-51 UniRef50_UPI0001BCF0E5 transcriptional regulator n=1 Tax=Selenom... 206 1e-51 UniRef50_C7GBJ0 Transcriptional regulator, LysR family n=1 Tax=R... 206 1e-51 UniRef50_A0AYH9 Transcriptional regulator, LysR family n=148 Tax... 206 1e-51 UniRef50_A4Z170 Putative transcriptional regulatory protein, Lys... 206 1e-51 UniRef50_B9Z947 Transcriptional regulator, LysR family n=1 Tax=L... 206 1e-51 UniRef50_Q7NCX0 LysR family transcriptional regulatory protein n... 205 1e-51 UniRef50_Q1YX76 Transcriptional regulators, LysR family protein ... 205 1e-51 UniRef50_A8SVR7 Putative uncharacterized protein n=2 Tax=Clostri... 205 1e-51 UniRef50_Q2T4U0 Transcriptional regulator, LysR family n=2 Tax=B... 205 1e-51 UniRef50_P77744 HTH-type transcriptional regulator abgR n=48 Tax... 205 1e-51 UniRef50_Q0A8N9 Transcriptional regulator, LysR family n=4 Tax=G... 205 1e-51 UniRef50_C0CUF5 Putative uncharacterized protein n=1 Tax=Clostri... 205 1e-51 UniRef50_Q1AUB8 Transcriptional regulator, LysR family n=2 Tax=B... 205 1e-51 UniRef50_UPI0000E0F9F3 Transcriptional Regulator, LysR family pr... 205 1e-51 UniRef50_B3JNA3 Putative uncharacterized protein n=1 Tax=Bactero... 205 1e-51 UniRef50_C9PJ12 Putative transcriptional regulator protein n=1 T... 205 1e-51 UniRef50_UPI0001B4610F LysR family transcriptional regulator n=1... 205 1e-51 UniRef50_A4JED2 Transcriptional regulator, LysR family n=9 Tax=P... 205 1e-51 UniRef50_B6IX78 Hydrogen peroxide-inducible genes activator n=1 ... 205 2e-51 UniRef50_C7MTU9 Transcriptional regulator, LysR family n=3 Tax=A... 205 2e-51 UniRef50_B4SSK9 Transcriptional regulator, LysR family n=3 Tax=S... 205 2e-51 UniRef50_A0KPQ5 Transcriptional regulator n=1 Tax=Aeromonas hydr... 205 2e-51 UniRef50_Q0K3U9 Transcriptional regulator, LysR-family n=2 Tax=B... 205 2e-51 UniRef50_Q0BCW3 Transcriptional regulator, LysR family n=30 Tax=... 205 2e-51 UniRef50_D0XGK1 Putative uncharacterized protein n=1 Tax=Vibrio ... 205 2e-51 UniRef50_A9HWS6 Transcriptional regulator, LysR-family n=1 Tax=B... 205 2e-51 UniRef50_Q15SK5 Transcriptional regulator, LysR family n=9 Tax=G... 205 2e-51 UniRef50_B0KIN0 Transcriptional regulator, LysR family n=20 Tax=... 205 2e-51 UniRef50_A8IAC4 Transcriptional regulator n=1 Tax=Azorhizobium c... 205 2e-51 UniRef50_Q2SHJ0 Transcriptional regulator n=1 Tax=Hahella chejue... 205 2e-51 UniRef50_Q5E7C7 Transcriptional regulator, LysR family n=5 Tax=V... 205 2e-51 UniRef50_A9F0I7 Transcriptional regulator, LysR family n=20 Tax=... 205 2e-51 UniRef50_Q1LD16 Transcriptional regulator, LysR family n=8 Tax=P... 205 2e-51 UniRef50_B8IVL1 Transcriptional regulator, LysR family n=2 Tax=P... 205 2e-51 UniRef50_Q1GFT2 Transcriptional regulator, LysR family n=1 Tax=R... 204 2e-51 UniRef50_C5BEX8 Transcriptional regulator, LysR family n=12 Tax=... 204 3e-51 UniRef50_Q0JY95 Transcriptional regulator, LysR-family n=4 Tax=P... 204 3e-51 UniRef50_D2R7I4 Transcriptional regulator, LysR family n=6 Tax=P... 204 3e-51 UniRef50_Q1GMF7 Transcriptional regulator, LysR family n=1 Tax=R... 204 3e-51 UniRef50_C3X7G6 Transcriptional regulator n=2 Tax=Oxalobacter fo... 204 3e-51 UniRef50_B0T3V7 Transcriptional regulator, LysR family n=1 Tax=C... 204 3e-51 UniRef50_Q21IY2 Transcriptional regulator, LysR family n=2 Tax=G... 204 3e-51 UniRef50_D0J615 Transcriptional regulator, LysR family n=2 Tax=C... 204 3e-51 UniRef50_C1YJH3 Transcriptional regulator, COG0583 n=1 Tax=Nocar... 204 3e-51 UniRef50_Q1QYT3 Transcriptional regulator, LysR family n=1 Tax=C... 204 3e-51 UniRef50_C6CDR8 Transcriptional regulator, LysR family n=27 Tax=... 204 3e-51 UniRef50_B4ETB5 LysR-family transcriptional regulator n=7 Tax=En... 204 3e-51 UniRef50_B1K332 Transcriptional regulator, LysR family n=6 Tax=B... 204 3e-51 UniRef50_D0Z9H4 Transcriptional regulator, LysR family n=40 Tax=... 204 3e-51 UniRef50_A8TZA8 Transcriptional regulator, LysR family protein n... 204 3e-51 UniRef50_Q1V682 Putative transcriptional regulator protein n=1 T... 204 4e-51 UniRef50_Q12DG5 Transcriptional regulator, LysR family n=1 Tax=P... 204 4e-51 UniRef50_C9ABQ3 Transcriptional regulator n=1 Tax=Enterococcus c... 204 4e-51 UniRef50_A0KPM6 Transcriptional regulator, LysR family n=2 Tax=G... 204 4e-51 UniRef50_C6CZP2 Transcriptional regulator, LysR family n=5 Tax=c... 204 4e-51 UniRef50_A6VUM5 Transcriptional regulator, LysR family n=2 Tax=G... 204 4e-51 UniRef50_Q1QWP3 Transcriptional regulator, LysR family n=1 Tax=C... 204 4e-51 UniRef50_B8IVY8 Transcriptional regulator, LysR family n=4 Tax=P... 204 5e-51 UniRef50_A0QCY6 Transcriptional regulator, LysR family protein n... 204 5e-51 UniRef50_C6W9R3 Transcriptional regulator, LysR family n=1 Tax=A... 204 5e-51 UniRef50_Q081K6 Transcriptional regulator, LysR family n=2 Tax=A... 204 5e-51 UniRef50_Q1YDL8 Transcriptional regulator, LysR family n=1 Tax=A... 204 5e-51 UniRef50_B4SNU6 Transcriptional regulator, LysR family n=1 Tax=S... 204 5e-51 UniRef50_B0TPA4 Transcriptional regulator, LysR family n=2 Tax=S... 204 5e-51 UniRef50_Q67PU0 LysR family transcriptional regulator n=1 Tax=Sy... 204 5e-51 UniRef50_B1K9P6 Transcriptional regulator, LysR family n=22 Tax=... 204 5e-51 UniRef50_D0D0K4 Transcriptional regulator n=1 Tax=Citreicella sp... 204 5e-51 UniRef50_P0ACR6 Uncharacterized HTH-type transcriptional regulat... 204 5e-51 UniRef50_B2JTF3 Transcriptional regulator, LysR family n=1 Tax=B... 203 6e-51 UniRef50_B5ZKC3 Transcriptional regulator, LysR family n=7 Tax=P... 203 6e-51 UniRef50_B5CY17 Putative uncharacterized protein n=2 Tax=Bactero... 203 6e-51 UniRef50_A6F002 Transcriptional regulator, LysR family protein n... 203 6e-51 UniRef50_B9KUK0 Transcriptional regulator n=2 Tax=Rhodobacterace... 203 7e-51 UniRef50_B9K150 Transcriptional regulator LysR family n=1 Tax=Ag... 203 7e-51 UniRef50_Q46S95 Transcriptional regulator, LysR family n=2 Tax=B... 203 7e-51 UniRef50_B4SKP4 Transcriptional regulator, LysR family n=24 Tax=... 203 8e-51 UniRef50_A1WHL2 Transcriptional regulator, LysR family n=10 Tax=... 203 8e-51 UniRef50_A5VBV3 Transcriptional regulator, LysR family n=1 Tax=S... 203 8e-51 UniRef50_B9X9V4 Transcriptional regulator, LysR family n=1 Tax=b... 203 8e-51 UniRef50_A6X7A0 Transcriptional regulator, LysR family n=1 Tax=O... 203 8e-51 UniRef50_B7VH72 Transcriptional regulator n=4 Tax=Vibrionales Re... 203 8e-51 UniRef50_A5L763 Transcriptional regulator n=1 Tax=Vibrionales ba... 203 9e-51 UniRef50_B2JUD8 Transcriptional regulator, LysR family n=12 Tax=... 203 9e-51 UniRef50_C0CT29 Putative uncharacterized protein n=1 Tax=Clostri... 202 1e-50 UniRef50_Q48IW5 Transcriptional regulator, LysR family n=8 Tax=P... 202 1e-50 UniRef50_O32255 Uncharacterized HTH-type transcriptional regulat... 202 1e-50 UniRef50_UPI0001B54141 LysR family transcriptional regulator n=1... 202 1e-50 UniRef50_B0C1S6 Transcriptional regulator, LysR family n=2 Tax=C... 202 1e-50 UniRef50_C1XNG0 Transcriptional regulator, COG0583 n=2 Tax=Meiot... 202 1e-50 UniRef50_C9LCS7 Putative transcriptional regulator n=1 Tax=Blaut... 202 1e-50 UniRef50_C0VZJ2 Oxidative stress transcriptional regulator n=1 T... 202 1e-50 UniRef50_Q7W108 Probable LysR-family transcriptional regulator n... 202 1e-50 UniRef50_Q1DBN8 Transcriptional regulator, LysR family n=2 Tax=C... 202 1e-50 UniRef50_Q1Z9L0 Putative transcriptional regulator, LysR family ... 202 1e-50 UniRef50_B8DKN9 Transcriptional regulator, LysR family n=4 Tax=P... 202 1e-50 UniRef50_B1HZ14 Transcriptional regulator-like protein (LysR fam... 202 1e-50 UniRef50_D1RNC3 Transcriptional regulatory protein n=1 Tax=Serra... 202 1e-50 UniRef50_Q122D0 Transcriptional regulator, LysR family n=1 Tax=P... 202 1e-50 UniRef50_Q0F2Z7 Transcriptional regulatory protein, LysR family ... 202 1e-50 UniRef50_B3E4Z6 Transcriptional regulator, LysR family n=3 Tax=D... 202 1e-50 UniRef50_A9WDF5 LysR substrate-binding n=3 Tax=Chloroflexus RepI... 202 1e-50 UniRef50_B8ERS8 Transcriptional regulator, LysR family n=1 Tax=M... 202 2e-50 UniRef50_A6W1I8 Transcriptional regulator, LysR family n=2 Tax=M... 202 2e-50 UniRef50_UPI0001C30F27 transcriptional regulator, LysR family n=... 202 2e-50 UniRef50_C0ZI31 Transcriptional regulator n=1 Tax=Brevibacillus ... 202 2e-50 UniRef50_A4WEP5 Transcriptional regulator, LysR family n=1 Tax=E... 202 2e-50 UniRef50_C0D867 Putative uncharacterized protein n=1 Tax=Clostri... 202 2e-50 UniRef50_A6FLE2 Transcriptional regulator, LysR family protein n... 202 2e-50 UniRef50_D0I933 Putative transcriptional regulatory protein LysR... 202 2e-50 UniRef50_C6VMS1 Transcription regulator n=11 Tax=Firmicutes RepI... 202 2e-50 UniRef50_A0R5A9 Transcriptional regulatory protein n=16 Tax=Bact... 202 2e-50 UniRef50_A9F1C1 Transcriptional regulator, LysR family n=1 Tax=S... 202 2e-50 UniRef50_C9QF24 Transcriptional regulators LysR family n=1 Tax=V... 201 2e-50 UniRef50_D0J1D7 Transcriptional regulator, LysR family n=12 Tax=... 201 2e-50 UniRef50_B9JE08 Transcriptional regulator protein n=11 Tax=Rhizo... 201 2e-50 UniRef50_A6AT33 Transcriptional regulator n=2 Tax=Vibrio harveyi... 201 2e-50 UniRef50_UPI0001B58B0A LysR family transcriptional regulator n=1... 201 2e-50 UniRef50_C8X9S9 Transcriptional regulator, LysR family n=5 Tax=A... 201 2e-50 UniRef50_D2S9A0 Transcriptional regulator, LysR family n=1 Tax=G... 201 3e-50 UniRef50_C1BAS4 Putative LysR family transcriptional regulator n... 201 3e-50 UniRef50_C6DBU7 Transcriptional regulator, LysR family n=4 Tax=P... 201 3e-50 UniRef50_C8NJC1 LysR family transcriptional regulator n=9 Tax=Co... 201 3e-50 UniRef50_Q7WJM8 Probable LysR-family transcriptional regulator n... 201 3e-50 UniRef50_Q47V66 Substrate-binding transcriptional regulator, Lys... 201 3e-50 UniRef50_C1DMS0 Transcriptional regulator, LysR family n=1 Tax=A... 201 3e-50 UniRef50_Q12BP5 Transcriptional regulator, LysR family n=1 Tax=P... 201 3e-50 UniRef50_B1M8N3 Transcriptional regulator, LysR family n=35 Tax=... 201 3e-50 UniRef50_Q1ZB78 Transcriptional regulator, LysR family protein n... 201 3e-50 UniRef50_Q0JZR1 Transcriptional regulator, LysR-family n=8 Tax=P... 201 3e-50 UniRef50_Q9RYH7 Transcriptional regulator, HTH_1 family n=2 Tax=... 200 4e-50 UniRef50_Q7W5S7 LysR-family transcriptional regulator n=3 Tax=Bo... 200 4e-50 UniRef50_B9Z0M9 Transcriptional regulator, LysR family n=2 Tax=B... 200 4e-50 UniRef50_A0R264 Transcriptional regulator, LysR family protein n... 200 4e-50 UniRef50_UPI000174499E transcriptional regulatory protein, LysR ... 200 4e-50 UniRef50_B8CHD0 Regulatory protein, LysR:LysR, substrate-binding... 200 4e-50 UniRef50_UPI0001C3125C transcriptional regulator, LysR family n=... 200 4e-50 UniRef50_C3KQ67 Transcriptional regulator, LysR family n=1 Tax=R... 200 4e-50 UniRef50_Q0BXT0 Putative oxidative stress regulatory protein Oxy... 200 4e-50 UniRef50_B2VHH8 Transcriptional regulator, LysR family n=1 Tax=E... 200 4e-50 UniRef50_B5ZVD7 Transcriptional regulator, LysR family n=4 Tax=R... 200 4e-50 UniRef50_Q0K190 Transcriptional regulator, LysR-family n=1 Tax=R... 200 4e-50 UniRef50_A9I810 Transcriptional regulator, LysR-family n=5 Tax=P... 200 4e-50 UniRef50_B4WIK9 LysR substrate binding domain protein n=1 Tax=Sy... 200 5e-50 UniRef50_B4UKP3 Transcriptional regulator, LysR family n=4 Tax=A... 200 5e-50 UniRef50_A8T595 Transcriptional regulator, LysR family, putative... 200 5e-50 UniRef50_C7NK10 Transcriptional regulator n=1 Tax=Kytococcus sed... 200 5e-50 UniRef50_A5W561 Transcriptional regulator, LysR family n=12 Tax=... 200 5e-50 UniRef50_B5F9Z3 Transcriptional regulator, LysR family n=3 Tax=V... 200 5e-50 UniRef50_B9Z173 Transcriptional regulator, LysR family n=1 Tax=L... 200 5e-50 UniRef50_A5V6I2 Transcriptional regulator, LysR family n=1 Tax=S... 200 5e-50 UniRef50_A7GMD6 Transcriptional regulator, LysR family n=3 Tax=B... 200 6e-50 UniRef50_C6XSY8 LysR substrate-binding n=12 Tax=Bacteroidetes Re... 200 6e-50 UniRef50_A1TYB8 Transcriptional regulator, LysR family n=39 Tax=... 200 6e-50 UniRef50_Q7WC66 LysR-family transcriptional regulator n=3 Tax=Bo... 200 6e-50 UniRef50_C6VMR5 Transcription regulator n=5 Tax=Lactobacillus Re... 200 6e-50 UniRef50_A8FU12 Transcriptional regulator n=2 Tax=Gammaproteobac... 200 6e-50 UniRef50_B4D9T5 Transcriptional regulator, LysR family n=1 Tax=C... 200 6e-50 UniRef50_C8NRP5 Transcription regulator n=2 Tax=Corynebacterium ... 200 6e-50 UniRef50_B9J825 Nod transcriptional regulator protein n=1 Tax=Ag... 200 6e-50 UniRef50_B7X2W7 Transcriptional regulator, LysR family n=1 Tax=C... 200 6e-50 UniRef50_Q13GE5 Transcriptional regulator, LysR family n=1 Tax=B... 200 6e-50 UniRef50_B7RWY7 LysR substrate binding domain protein n=2 Tax=un... 200 7e-50 UniRef50_D2QVQ4 Transcriptional regulator, LysR family n=22 Tax=... 200 7e-50 UniRef50_A8LCN9 Transcriptional regulator, LysR family n=7 Tax=A... 200 7e-50 UniRef50_D2I932 Putative LysR family transcriptional regulator n... 200 7e-50 UniRef50_D1XD48 Transcriptional regulator, LysR family n=2 Tax=S... 200 7e-50 UniRef50_O33945 Probable cat1 operon transcriptional activator n... 200 7e-50 UniRef50_B4CXF3 Transcriptional regulator, LysR family n=1 Tax=C... 200 7e-50 UniRef50_A8KZI9 Transcriptional regulator, LysR family n=4 Tax=A... 200 7e-50 UniRef50_Q47TZ7 Putative LysR-family transcriptional regulator n... 199 8e-50 UniRef50_B8DQG2 Transcriptional regulator, LysR family n=6 Tax=B... 199 8e-50 UniRef50_A1R1P0 Putative transcriptional regulator, LysR family ... 199 8e-50 UniRef50_Q12BV9 Transcriptional regulator, LysR family n=5 Tax=c... 199 8e-50 UniRef50_A6V8B0 Transcriptional regulator, LysR family n=10 Tax=... 199 8e-50 UniRef50_Q0B1J5 Transcriptional regulator, LysR family n=1 Tax=B... 199 9e-50 UniRef50_D0DE94 Transcriptional regulator, LysR family n=1 Tax=C... 199 9e-50 UniRef50_Q8XFS3 Probable transcription regulator protein n=1 Tax... 199 9e-50 UniRef50_B1YXM2 Transcriptional regulator, LysR family n=3 Tax=B... 199 9e-50 UniRef50_Q46Q42 Regulatory protein, LysR:LysR, substrate-binding... 199 9e-50 UniRef50_Q2GAY9 Transcriptional regulator, LysR family n=1 Tax=N... 199 9e-50 UniRef50_Q4KKE5 Transcriptional regulator, LysR family n=27 Tax=... 199 9e-50 UniRef50_B4T1W6 LysR family regulatory protein n=58 Tax=Enteroba... 199 1e-49 UniRef50_B5JLL8 Putative uncharacterized protein n=1 Tax=Verruco... 199 1e-49 UniRef50_D0IWI0 Transcriptional regulator, LysR family n=3 Tax=C... 199 1e-49 UniRef50_B3QAJ4 Transcriptional regulator, LysR family n=4 Tax=A... 199 1e-49 UniRef50_A3ZYQ6 Transcriptional regulator, LysR family protein n... 199 1e-49 UniRef50_UPI0001788565 transcriptional regulator, LysR family n=... 199 1e-49 UniRef50_Q0S8J9 Transcriptional regulator, LysR family protein n... 199 1e-49 UniRef50_B8IDW8 Transcriptional regulator, LysR family n=1 Tax=M... 199 1e-49 UniRef50_A1BA89 Transcriptional regulator, LysR family n=4 Tax=A... 199 1e-49 UniRef50_A8H3B3 Transcriptional regulator, LysR family n=7 Tax=G... 199 1e-49 UniRef50_D1PCH2 Transcriptional regulator, LysR family n=10 Tax=... 199 2e-49 UniRef50_C8W2B6 Transcriptional regulator, LysR family n=1 Tax=D... 199 2e-49 UniRef50_C4DFU1 Transcriptional regulator, COG0583 n=1 Tax=Stack... 199 2e-49 UniRef50_B7RU53 LysR substrate binding domain protein n=2 Tax=un... 199 2e-49 UniRef50_B1KHA3 Transcriptional regulator, LysR family n=1 Tax=S... 198 2e-49 UniRef50_Q1GEX3 Transcriptional regulator, LysR family n=1 Tax=R... 198 2e-49 UniRef50_B3EBY3 Transcriptional regulator, LysR family n=3 Tax=P... 198 2e-49 UniRef50_Q4ZRN4 Regulatory protein, LysR:LysR, substrate-binding... 198 2e-49 UniRef50_B9ZSB8 Transcriptional regulator, LysR family n=4 Tax=B... 198 2e-49 UniRef50_A9C046 Transcriptional regulator, LysR family n=2 Tax=c... 198 2e-49 UniRef50_A1S338 Transcriptional regulator, LysR family n=16 Tax=... 198 2e-49 UniRef50_B2I357 Transcriptional regulator n=14 Tax=Moraxellaceae... 198 2e-49 UniRef50_Q8KY13 LysR-type transcriptional activator n=1 Tax=Rhiz... 198 2e-49 UniRef50_Q1IBR2 Putative transcriptional regulator, LysR family ... 198 2e-49 UniRef50_Q1N6N4 Transcriptional regulator, LysR family protein n... 198 2e-49 UniRef50_A6V5Q0 MexT protein n=1 Tax=Pseudomonas aeruginosa PA7 ... 198 2e-49 UniRef50_Q38ZY8 Transcriptional regulator, LysR family n=1 Tax=B... 198 2e-49 UniRef50_B5GKV4 LysR-family transcriptional regulator (Fragment)... 198 2e-49 UniRef50_C6D056 Transcriptional regulator, LysR family n=1 Tax=P... 198 2e-49 UniRef50_A4XPG0 Transcriptional regulator, LysR family n=1 Tax=P... 198 2e-49 UniRef50_C4V039 Transcriptional regulator, LysR family n=4 Tax=E... 198 2e-49 UniRef50_Q30Z73 Transcriptional regulator, LysR family n=3 Tax=D... 198 2e-49 UniRef50_Q13QG4 Transcriptional regulator, LysR family n=4 Tax=B... 198 3e-49 UniRef50_B9XK88 Transcriptional regulator, LysR family n=2 Tax=V... 198 3e-49 UniRef50_C0Z633 Transcriptional regulator n=3 Tax=Bacillales Rep... 198 3e-49 UniRef50_A8LT79 Transcriptional regulator n=1 Tax=Dinoroseobacte... 198 3e-49 UniRef50_A0NZC9 LysR family regulatory protein n=3 Tax=Rhodobact... 198 3e-49 UniRef50_Q477L7 Regulatory protein, LysR:LysR, substrate-binding... 198 3e-49 UniRef50_C7NJ53 Transcriptional regulator n=1 Tax=Kytococcus sed... 197 3e-49 UniRef50_UPI000050F7F0 LysR family transcriptional regulator n=1... 197 3e-49 UniRef50_Q7WNE4 LysR-family transcriptional regulator n=1 Tax=Bo... 197 3e-49 UniRef50_B4ETA7 LysR-family transciptional regulator n=37 Tax=En... 197 3e-49 UniRef50_Q1YVH2 Transcriptional regulator, LysR family protein n... 197 3e-49 UniRef50_A5G2D8 Transcriptional regulator, LysR family n=1 Tax=A... 197 3e-49 UniRef50_UPI0001C3136F transcriptional regulator, MarR family n=... 197 3e-49 UniRef50_A4W926 Transcriptional regulator, LysR family n=1 Tax=E... 197 3e-49 UniRef50_D2B6U1 DNA-binding transcriptional regulator CynR n=1 T... 197 4e-49 UniRef50_D1PPF0 Transcriptional regulator, LysR family n=1 Tax=S... 197 4e-49 UniRef50_C6CDY7 Transcriptional regulator, LysR family n=10 Tax=... 197 4e-49 UniRef50_B5XSE9 Transcriptional regulator, LysR family n=6 Tax=E... 197 4e-49 UniRef50_A4BHD6 Transcriptional regulator lysR family protein n=... 197 4e-49 UniRef50_P52698 HTH-type transcriptional regulator phcA n=16 Tax... 197 4e-49 UniRef50_Q46SX0 Transcriptional regulator, LysR family n=4 Tax=B... 197 4e-49 UniRef50_A6TWD6 Transcriptional regulator, LysR family n=1 Tax=A... 197 4e-49 UniRef50_C0ADM3 DNA-binding transcriptional regulator CynR n=2 T... 197 4e-49 UniRef50_A4F849 LysR-family transcriptional regulator n=7 Tax=Ac... 197 4e-49 UniRef50_A6SXB4 Transcriptional regulator, LysR family n=1 Tax=J... 197 5e-49 UniRef50_C1DSG7 Transcriptional regulator, LysR family n=1 Tax=A... 197 5e-49 UniRef50_B5HHH0 YwqM n=1 Tax=Streptomyces pristinaespiralis ATCC... 197 5e-49 UniRef50_Q21B31 Transcriptional regulator, LysR family n=2 Tax=A... 197 5e-49 UniRef50_B5XRQ2 Transcriptional regulator, LysR family n=4 Tax=K... 197 5e-49 UniRef50_B0TCS4 Transcriptional regulator, lysr family n=2 Tax=F... 197 5e-49 UniRef50_Q0VH46 Putative LysR type regulator n=3 Tax=Proteobacte... 197 5e-49 UniRef50_B7RZD5 LysR substrate binding domain protein n=1 Tax=ma... 197 5e-49 UniRef50_A8LRQ2 Transcriptional regulator, LysR family n=1 Tax=D... 197 5e-49 UniRef50_A6T102 Transcriptional regulator, LysR family n=1 Tax=J... 197 5e-49 UniRef50_Q39JP1 Transcriptional regulator, LysR family n=11 Tax=... 197 6e-49 UniRef50_B1Y0L4 Transcriptional regulator, LysR family n=2 Tax=B... 197 6e-49 UniRef50_A8ZUD0 Transcriptional regulator, LysR family n=1 Tax=D... 197 6e-49 UniRef50_C3JGQ8 LysR-family transcriptional regulator n=2 Tax=Rh... 197 6e-49 UniRef50_C1DL37 LysR family transcriptional regulator protein n=... 197 6e-49 UniRef50_C6HY10 Transcriptional regulator, LysR family n=1 Tax=L... 197 6e-49 UniRef50_A6D744 Putative transcriptional regulator n=1 Tax=Vibri... 197 6e-49 UniRef50_Q0FX50 Transcriptional regulator, LysR family protein n... 197 6e-49 UniRef50_Q4KHB2 Transcriptional regulator, LysR family n=28 Tax=... 197 6e-49 UniRef50_C6NW00 Transcriptional regulator, LysR family n=1 Tax=A... 197 7e-49 UniRef50_Q4K4U2 Transcriptional regulator, LysR family n=17 Tax=... 197 7e-49 UniRef50_A9B4C8 Transcriptional regulator, LysR family n=1 Tax=H... 196 7e-49 UniRef50_B4STD8 Transcriptional regulator, LysR family n=6 Tax=G... 196 7e-49 UniRef50_Q3S4D5 LysR-like regular protein n=1 Tax=Polaromonas na... 196 7e-49 UniRef50_Q1LM47 Transcriptional regulator, LysR family n=1 Tax=C... 196 7e-49 UniRef50_UPI00004DBCAD UPI00004DBCAD related cluster n=2 Tax=Xen... 196 8e-49 UniRef50_B7H3Y5 HTH-type transcriptional regulator alsR (Als ope... 196 8e-49 UniRef50_Q0K3Z3 Transcriptional regulator, LysR-family n=1 Tax=R... 196 8e-49 UniRef50_B2HU56 Transcriptional regulator n=17 Tax=Acinetobacter... 196 8e-49 UniRef50_C5ALH3 Transcriptional regulator, LysR family protein n... 196 9e-49 UniRef50_A1SFE6 Transcriptional regulator, LysR family n=3 Tax=A... 196 9e-49 UniRef50_Q1LGR3 Transcriptional regulator, LysR family n=3 Tax=B... 196 9e-49 UniRef50_A6X5N5 Transcriptional regulator, LysR family n=37 Tax=... 196 9e-49 UniRef50_Q3IKZ1 Putative transcriptional regulator of the LysR f... 196 9e-49 UniRef50_C9NTB9 LysR-like transcriptional regulator n=5 Tax=Vibr... 196 9e-49 UniRef50_A4YQI9 Transcriptional regulator of protochatechuate de... 196 1e-48 UniRef50_B6B1G4 LysR family transcriptional regulatory protein n... 196 1e-48 UniRef50_B4E7M9 LysR family regulatory protein n=1 Tax=Burkholde... 196 1e-48 UniRef50_Q1DBZ6 Transcriptional regulator, LysR family n=1 Tax=M... 196 1e-48 UniRef50_C4K9T0 Transcriptional regulator, LysR family n=1 Tax=T... 196 1e-48 UniRef50_B1LYW9 Transcriptional regulator, LysR family n=10 Tax=... 196 1e-48 UniRef50_B8IW67 Transcriptional regulator, LysR family n=1 Tax=M... 196 1e-48 UniRef50_B2T7R4 Transcriptional regulator, LysR family n=5 Tax=B... 196 1e-48 UniRef50_Q15VE5 Transcriptional regulator, LysR family n=1 Tax=P... 196 1e-48 UniRef50_D1CCM2 Transcriptional regulator, LysR family n=1 Tax=T... 196 1e-48 UniRef50_A6GE91 Probable transcription regulator protein n=1 Tax... 196 1e-48 UniRef50_B3EA60 Transcriptional regulator, LysR family n=2 Tax=B... 195 1e-48 UniRef50_B6R352 Transcriptional regulator, LysR family n=1 Tax=P... 195 1e-48 UniRef50_Q391B6 Transcriptional regulator, LysR family n=1 Tax=B... 195 1e-48 UniRef50_A6UB72 Transcriptional regulator, LysR family n=1 Tax=S... 195 1e-48 UniRef50_C5B901 Transcriptional activator, LysR family n=74 Tax=... 195 1e-48 UniRef50_A5ZQM8 Putative uncharacterized protein n=1 Tax=Ruminoc... 195 1e-48 UniRef50_Q7MCL9 Putative transcriptional regulator n=1 Tax=Vibri... 195 1e-48 UniRef50_B6IYM5 RuBisCO operon transcriptional regulator n=1 Tax... 195 1e-48 UniRef50_A1WN33 Transcriptional regulator, LysR family n=1 Tax=V... 195 1e-48 UniRef50_A9AT14 LysR family transcriptional regulator n=11 Tax=B... 195 1e-48 UniRef50_A9BZQ9 Transcriptional regulator, LysR family n=1 Tax=D... 195 1e-48 UniRef50_A9AMZ1 Transcriptional regulator, LysR family n=6 Tax=P... 195 1e-48 UniRef50_A4XED3 Transcriptional regulator, LysR family n=1 Tax=N... 195 1e-48 UniRef50_A1SEI3 Transcriptional regulator, LysR family n=1 Tax=N... 195 2e-48 UniRef50_P52661 HTH-type transcriptional regulator gbpR n=1 Tax=... 195 2e-48 UniRef50_B9JZE6 Transcriptional regulator LysR family n=1 Tax=Ag... 195 2e-48 UniRef50_B1M0B1 Transcriptional regulator, LysR family n=24 Tax=... 195 2e-48 UniRef50_Q1GQE8 Transcriptional regulator, LysR family n=1 Tax=S... 195 2e-48 UniRef50_A8FJ94 Possible LysR family transcriptional regulator n... 195 2e-48 UniRef50_A3K9S7 Transcriptional regulator, LysR family protein n... 195 2e-48 UniRef50_Q47P44 Putative LysR-family transcriptional regulator n... 195 2e-48 UniRef50_B1M8F7 Transcriptional regulator, LysR family n=4 Tax=R... 195 2e-48 UniRef50_D0J3K7 Transcriptional regulator, LysR family n=3 Tax=C... 195 2e-48 UniRef50_A5CSX6 Putative transcriptional regulator, LysR family ... 195 2e-48 UniRef50_B7V886 Probable transcriptional regulator n=7 Tax=Pseud... 195 2e-48 UniRef50_B1Y3F3 Transcriptional regulator, LysR family n=2 Tax=B... 195 2e-48 UniRef50_D2SB86 Transcriptional regulator, LysR family n=3 Tax=A... 195 2e-48 UniRef50_Q2RQL6 Transcriptional regulator, LysR family n=2 Tax=R... 195 2e-48 UniRef50_A9HZJ0 Transcriptional regulator, LysR-family n=2 Tax=B... 195 2e-48 UniRef50_A3VL76 Putative LysR-family transcriptional regulator n... 195 2e-48 UniRef50_A4JMP2 Transcriptional regulator, LysR family n=1 Tax=B... 195 2e-48 UniRef50_D2ATF2 LysR family transcriptional regulator n=2 Tax=Ac... 195 2e-48 UniRef50_A9BXG3 Transcriptional regulator, LysR family n=218 Tax... 195 2e-48 UniRef50_A1TIM2 Transcriptional regulator, LysR family n=2 Tax=A... 195 2e-48 UniRef50_A4XEX1 Transcriptional regulator, LysR family n=2 Tax=S... 195 2e-48 UniRef50_Q5LR91 Transcriptional regulator, LysR family n=3 Tax=R... 195 2e-48 UniRef50_B8E7T8 Transcriptional regulator, LysR family n=7 Tax=S... 195 2e-48 UniRef50_B8J293 Transcriptional regulator, LysR family n=1 Tax=D... 195 3e-48 UniRef50_Q20XL9 Transcriptional regulator, LysR family n=1 Tax=R... 194 3e-48 UniRef50_A0R7B5 LysR-family protein transcriptional regulator n=... 194 3e-48 UniRef50_D0J6E9 Transcriptional regulator, LysR family n=2 Tax=C... 194 3e-48 UniRef50_D0LQN8 Transcriptional regulator, LysR family n=1 Tax=H... 194 3e-48 UniRef50_A6UK78 Transcriptional regulator, LysR family n=2 Tax=S... 194 3e-48 UniRef50_B6J4H7 Hydrogen peroxide-inducible gene activator n=7 T... 194 3e-48 UniRef50_A8FAL6 LysR family transcriptional regulator n=10 Tax=B... 194 3e-48 UniRef50_A4EQ42 Transcriptional regulator, LysR family protein n... 194 3e-48 UniRef50_A5W7U4 Transcriptional regulator, LysR family n=17 Tax=... 194 3e-48 UniRef50_C7PZR8 Transcriptional regulator, LysR family n=1 Tax=C... 194 3e-48 UniRef50_B2T513 Transcriptional regulator, LysR family n=65 Tax=... 194 3e-48 UniRef50_B9QYV9 LysR substrate binding domain protein n=1 Tax=La... 194 3e-48 UniRef50_Q13JN6 Transcriptional regulator, LysR family n=7 Tax=B... 194 3e-48 UniRef50_D1A8L0 Transcriptional regulator, LysR family n=2 Tax=A... 194 3e-48 UniRef50_B5ZQW7 Transcriptional regulator, LysR family n=18 Tax=... 194 3e-48 UniRef50_B0TM59 Transcriptional regulator, LysR family n=2 Tax=S... 194 3e-48 UniRef50_B5ZKB2 Transcriptional regulator, LysR family n=2 Tax=G... 194 3e-48 UniRef50_A8H6N4 Transcriptional regulator, LysR family n=3 Tax=S... 194 3e-48 UniRef50_B5WAN2 Transcriptional regulator, LysR family n=1 Tax=B... 194 3e-48 UniRef50_C7JCS7 Transcriptional regulator LysR n=11 Tax=Proteoba... 194 3e-48 UniRef50_A3NGA2 Transcriptional regulator n=70 Tax=Proteobacteri... 194 4e-48 UniRef50_A7IDL3 Transcriptional regulator, LysR family n=2 Tax=X... 194 4e-48 UniRef50_A6CVD4 Transcriptional regulator, LysR family protein n... 194 4e-48 UniRef50_C4ZIH4 Transcriptional regulator, LysR family n=1 Tax=T... 194 4e-48 UniRef50_B5G8L5 Transcriptional regulator n=3 Tax=Actinomycetale... 194 4e-48 UniRef50_A0LA88 Transcriptional regulator, LysR family n=1 Tax=M... 194 4e-48 UniRef50_A3U1I2 Regulatory protein, LysR:LysR, substrate-binding... 194 4e-48 UniRef50_D1ABG1 Transcriptional regulator, MarR family n=2 Tax=S... 194 4e-48 UniRef50_A8H9L3 Transcriptional regulator, LysR family n=5 Tax=S... 194 4e-48 UniRef50_A6WFB8 Transcriptional regulator, LysR family n=1 Tax=K... 194 4e-48 UniRef50_P20667 HTH-type transcriptional regulator catR n=15 Tax... 194 4e-48 UniRef50_UPI0001B4E379 LysR family transcriptional regulator n=1... 193 4e-48 UniRef50_Q7WMW6 Putative LysR-family transcriptional regulator n... 193 4e-48 UniRef50_A5FXN6 Transcriptional regulator, LysR family n=6 Tax=A... 193 4e-48 UniRef50_B2JVL8 Transcriptional regulator, LysR family n=1 Tax=B... 193 5e-48 UniRef50_C3JW42 Transcriptional regulator, LysR family n=4 Tax=R... 193 5e-48 UniRef50_Q0RL92 Putative uncharacterized protein n=1 Tax=Frankia... 193 5e-48 UniRef50_Q67TA2 LysR family transcriptional regulator n=1 Tax=Sy... 193 5e-48 UniRef50_A7IMC0 Transcriptional regulator, LysR family n=18 Tax=... 193 6e-48 UniRef50_C8XBJ1 Transcriptional regulator, LysR family n=1 Tax=N... 193 6e-48 UniRef50_B7RV59 LysR substrate binding domain protein n=1 Tax=ma... 193 6e-48 UniRef50_B4DCH5 Transcriptional regulator, LysR family n=1 Tax=C... 193 6e-48 UniRef50_Q46P28 Transcriptional regulator, LysR family n=1 Tax=R... 193 6e-48 UniRef50_UPI0001A45942 HTH-type transcriptional regulator gltC n... 193 6e-48 UniRef50_UPI00019F10A8 LysR family regulatory protein n=1 Tax=Ci... 193 6e-48 UniRef50_A3QFK5 Transcriptional regulator, LysR family n=69 Tax=... 193 7e-48 UniRef50_UPI0001B565BC LysR family transcriptional regulator n=1... 193 7e-48 UniRef50_D2PY57 Transcriptional regulator, LysR family n=3 Tax=A... 193 8e-48 UniRef50_A6W0Q8 Transcriptional regulator, LysR family n=2 Tax=M... 193 8e-48 UniRef50_Q5FRA7 Putative transcriptional regulator n=1 Tax=Gluco... 193 8e-48 UniRef50_Q0BQN6 Hydrogen peroxide-inducible genes activator n=2 ... 193 8e-48 UniRef50_C9XYN5 Uncharacterized HTH-type transcriptional regulat... 193 8e-48 UniRef50_A7ZNW2 Transcriptional regulator, LysR family n=40 Tax=... 193 8e-48 UniRef50_B5ZWA1 Transcriptional regulator, LysR family n=4 Tax=R... 193 9e-48 UniRef50_Q13GF1 Transcriptional regulator, LysR family n=1 Tax=B... 193 9e-48 UniRef50_Q15XL4 Transcriptional regulator, LysR family n=1 Tax=P... 193 1e-47 UniRef50_Q12EW2 Transcriptional regulator, LysR family n=1 Tax=P... 193 1e-47 UniRef50_A1K6J7 LysR-family transcriptional regulator n=5 Tax=Pr... 192 1e-47 UniRef50_A3VVC0 Hydrogen peroxide-inducible genes activator prot... 192 1e-47 UniRef50_Q01RY1 Transcriptional regulator, LysR family n=1 Tax=C... 192 1e-47 UniRef50_A4FAR0 Transcriptional regulator n=4 Tax=Actinomycetale... 192 1e-47 UniRef50_A4T9R9 Transcriptional regulator, LysR family n=8 Tax=C... 192 1e-47 UniRef50_C5CQD2 Transcriptional regulator, LysR family n=1 Tax=V... 192 1e-47 UniRef50_Q2BLC9 LysR family regulatory protein n=1 Tax=Neptuniib... 192 1e-47 UniRef50_Q7D3Y4 Transcriptional regulator, LysR family n=3 Tax=P... 192 1e-47 UniRef50_A6NX65 Putative uncharacterized protein n=1 Tax=Bactero... 192 1e-47 UniRef50_B1KCH9 Transcriptional regulator, LysR family n=2 Tax=B... 192 1e-47 UniRef50_Q160L3 Transcriptional regulator, LysR family, putative... 192 1e-47 UniRef50_C6QC52 Transcriptional regulator, LysR family n=1 Tax=H... 192 1e-47 UniRef50_C9KQE9 Transcriptional regulator, LysR family n=1 Tax=M... 192 1e-47 UniRef50_B9J8D6 Transcriptional regulator protein n=69 Tax=Prote... 192 1e-47 UniRef50_P52670 HTH-type transcriptional regulator ilvR n=98 Tax... 192 1e-47 UniRef50_B8HGN1 Transcriptional regulator, LysR family n=4 Tax=M... 192 1e-47 UniRef50_B7RS92 Regulatory protein, LysR:LysR, substrate-binding... 192 1e-47 UniRef50_C6C4P6 Transcriptional regulator, LysR family n=4 Tax=P... 192 1e-47 UniRef50_A9C1Z6 Transcriptional regulator, LysR family n=1 Tax=D... 192 1e-47 UniRef50_Q1AVK2 Transcriptional regulator, LysR family n=1 Tax=R... 192 1e-47 UniRef50_B3PFN1 Transcriptional regulator, LysR family n=1 Tax=C... 192 1e-47 UniRef50_D1UHR2 Transcriptional regulator, LysR family n=1 Tax=B... 192 1e-47 UniRef50_Q167Q4 Oxidative stress transcription regulator, oxyR, ... 192 2e-47 UniRef50_Q3SFM8 Transcriptional regulator n=3 Tax=Proteobacteria... 192 2e-47 UniRef50_D2B2W6 Transcriptional regulator, LysR family n=17 Tax=... 192 2e-47 UniRef50_B8DKE3 Transcriptional regulator, LysR family n=1 Tax=D... 192 2e-47 UniRef50_A1SEX2 LysR, substrate-binding n=11 Tax=Actinomycetales... 192 2e-47 UniRef50_B7K2F2 Transcriptional regulator, LysR family n=8 Tax=C... 192 2e-47 UniRef50_A7IBY1 Transcriptional regulator, LysR family n=15 Tax=... 192 2e-47 UniRef50_D1BTU3 Transcriptional regulator, LysR family n=1 Tax=X... 192 2e-47 UniRef50_Q8TVB0 Transcriptional regulator of the LysR family n=1... 192 2e-47 UniRef50_Q1QUX6 Transcriptional regulator, LysR family n=1 Tax=C... 192 2e-47 UniRef50_A0AXF9 Transcriptional regulator, LysR family n=9 Tax=B... 192 2e-47 UniRef50_D2RM19 Transcriptional regulator, LysR family n=2 Tax=A... 192 2e-47 UniRef50_Q73ZG9 Putative uncharacterized protein n=2 Tax=Mycobac... 192 2e-47 UniRef50_Q4KGL9 Transcriptional regulator, LysR family n=15 Tax=... 192 2e-47 UniRef50_Q0S956 Transcriptional regulator, LysR family protein n... 192 2e-47 UniRef50_Q391W5 Transcriptional regulator, LysR family n=3 Tax=B... 192 2e-47 UniRef50_C9YD50 RuBisCO operon transcriptional regulator n=1 Tax... 192 2e-47 UniRef50_A6EZR5 Transcriptional regulator, LysR family protein n... 191 2e-47 UniRef50_P03030 Transcriptional activator protein lysR n=101 Tax... 191 2e-47 UniRef50_A4FJ36 LysR-family transcriptional regulator n=2 Tax=Ac... 191 2e-47 UniRef50_C9PE36 Probable transcription regulator protein n=2 Tax... 191 2e-47 UniRef50_Q4ZT12 Regulatory protein, LysR:LysR, substrate-binding... 191 2e-47 UniRef50_Q2BJH5 LysR-family transcriptional regulator n=1 Tax=Ne... 191 2e-47 UniRef50_C2ANJ1 Transcriptional regulator, COG0583 n=1 Tax=Tsuka... 191 2e-47 UniRef50_UPI0001B4FA16 LysR family transcriptional regulator n=1... 191 2e-47 UniRef50_A1W6X9 Transcriptional regulator, LysR family n=19 Tax=... 191 2e-47 UniRef50_A4WZV0 Transcriptional regulator, LysR family n=1 Tax=R... 191 2e-47 UniRef50_C9RA29 Transcriptional regulator, LysR family n=1 Tax=A... 191 3e-47 UniRef50_B8GM38 LysR family transcriptional regulator n=4 Tax=Pr... 191 3e-47 UniRef50_Q98A96 Nitrogen assimilation control protein n=3 Tax=Me... 191 3e-47 UniRef50_C3JX55 HTH-type transcriptional regulator CynR n=2 Tax=... 191 3e-47 UniRef50_P42722 HTH-type transcriptional regulator cfxR n=9 Tax=... 191 3e-47 UniRef50_UPI0001BCC5DA LysR family transcriptional regulator n=1... 191 3e-47 UniRef50_Q0S6C8 Transcriptional regulator, LysR family protein n... 191 3e-47 UniRef50_A0AZD8 Transcriptional regulator, LysR family n=17 Tax=... 191 3e-47 UniRef50_A8II36 Putative transcriptional regulator n=1 Tax=Azorh... 191 3e-47 UniRef50_Q5W9E2 Putative LysR-type transcriptional regulator n=2... 191 3e-47 UniRef50_Q9ZHH8 LysR-type transcriptional regulator PhnS n=1 Tax... 191 3e-47 UniRef50_C5CPN7 Transcriptional regulator, LysR family n=1 Tax=V... 191 3e-47 UniRef50_C0D3N8 Putative uncharacterized protein n=2 Tax=Clostri... 191 3e-47 UniRef50_Q0RY04 Transcriptional regulator, LysR family protein n... 191 3e-47 UniRef50_C7QGK1 Transcriptional regulator, LysR family n=1 Tax=C... 191 3e-47 UniRef50_D1PWM9 HTH_1 family transcriptional regulator n=4 Tax=P... 191 3e-47 UniRef50_A1K5Q5 Transcriptional regulator, LysR family n=4 Tax=B... 191 3e-47 UniRef50_C0ZAD7 Transcriptional regulator n=1 Tax=Brevibacillus ... 191 3e-47 UniRef50_Q1YKY0 Possible transcriptional regulator n=1 Tax=Auran... 191 3e-47 UniRef50_Q2KBI7 Probable transcriptional regulator protein, LysR... 191 3e-47 UniRef50_C3K6Q2 Nodulation protein D n=1 Tax=Pseudomonas fluores... 191 4e-47 UniRef50_C6HUD2 Transcriptional regulator, LysR family n=1 Tax=L... 190 4e-47 UniRef50_A1BA87 Transcriptional regulator, LysR family n=1 Tax=P... 190 4e-47 UniRef50_P55359 Nodulation protein D 1 n=250 Tax=Proteobacteria ... 190 4e-47 UniRef50_Q72A86 Transcriptional regulator, LysR family n=3 Tax=D... 190 4e-47 UniRef50_UPI0001693B14 transcriptional regulator, LysR family pr... 190 4e-47 UniRef50_Q7WNN7 Probable LysR-family transcriptional regulator n... 190 4e-47 UniRef50_B5JHH8 LysR substrate binding domain protein n=1 Tax=Ve... 190 4e-47 UniRef50_D2MBA7 Transcriptional regulator, LysR family n=1 Tax=R... 190 4e-47 UniRef50_Q1LFI3 Transcriptional regulator, LysR family n=1 Tax=C... 190 4e-47 UniRef50_A4AGD2 Putative LysR-family transcriptional regulator n... 190 4e-47 UniRef50_C1B6M2 Putative LysR family transcriptional regulator n... 190 4e-47 UniRef50_Q46NS6 Transcriptional regulator, LysR family n=6 Tax=B... 190 4e-47 UniRef50_B5I3M3 Transcriptional regulator n=1 Tax=Streptomyces s... 190 4e-47 UniRef50_Q0B7J0 Transcriptional regulator, LysR family n=1 Tax=B... 190 4e-47 UniRef50_Q7D0H0 Transcriptional regulator, LysR family n=12 Tax=... 190 5e-47 UniRef50_C2AM94 Transcriptional regulator, COG0583 n=1 Tax=Tsuka... 190 5e-47 UniRef50_B4S2V4 Transcriptional regulator, LysR family protein n... 190 5e-47 UniRef50_Q67MJ1 LysR family transcriptional regulator n=1 Tax=Sy... 190 5e-47 UniRef50_A3NJ16 Transcriptional regulator, LysR family n=17 Tax=... 190 5e-47 UniRef50_D2LJB2 Transcriptional regulator, LysR family n=1 Tax=R... 190 5e-47 UniRef50_B5I0V5 LysR-family transcriptional regulator n=10 Tax=A... 190 6e-47 UniRef50_B8J696 Transcriptional regulator, LysR family n=3 Tax=A... 190 6e-47 UniRef50_B8H865 Transcriptional regulator, LysR family n=1 Tax=A... 190 6e-47 UniRef50_C3MFM7 Putative transcriptional regulator, LysR family ... 190 6e-47 Sequences not found previously or not previously below threshold: UniRef50_Q3AG03 Transcriptional regulator, LysR family n=2 Tax=C... 225 1e-57 UniRef50_B8FPA0 Transcriptional regulator, LysR family n=4 Tax=C... 217 6e-55 UniRef50_A4J1K6 Transcriptional regulator, LysR family n=1 Tax=D... 214 3e-54 UniRef50_C6Q0M3 Transcriptional regulator, LysR family n=1 Tax=C... 214 3e-54 UniRef50_C6MCJ5 Transcriptional regulator, LysR family n=1 Tax=N... 214 4e-54 UniRef50_P96725 Uncharacterized HTH-type transcriptional regulat... 212 1e-53 UniRef50_A5D2L1 Transcriptional regulator n=1 Tax=Pelotomaculum ... 212 1e-53 UniRef50_C3I9W8 HTH-type transcriptional regulator alsR n=1 Tax=... 211 3e-53 UniRef50_C0BY92 Putative uncharacterized protein n=5 Tax=Firmicu... 210 3e-53 UniRef50_C6C1H7 Transcriptional regulator, LysR family n=1 Tax=D... 210 5e-53 UniRef50_C1SLV8 Transcriptional regulator, LysR family n=1 Tax=D... 210 5e-53 UniRef50_C3AN59 Transcriptional regulator, LysR n=4 Tax=Bacilli ... 210 7e-53 UniRef50_C8VWS6 Transcriptional regulator, LysR family n=1 Tax=D... 209 8e-53 UniRef50_C3BCJ4 Transcriptional regulator LysR n=1 Tax=Bacillus ... 209 1e-52 UniRef50_C2FRR6 LysR family transcriptional regulator n=2 Tax=Sp... 208 2e-52 UniRef50_C0ZFW3 Transcriptional regulator n=1 Tax=Brevibacillus ... 208 2e-52 UniRef50_B5YJV7 Transcriptional regulator n=1 Tax=Thermodesulfov... 207 3e-52 UniRef50_B7GI02 Transcriptional regulator, LysR family n=2 Tax=B... 207 3e-52 UniRef50_B9IRL1 HTH_1, Bacterial regulatory helix-turn-helix pro... 206 9e-52 UniRef50_B0V4K3 HTH-type transcriptional regulator n=13 Tax=Acin... 206 1e-51 UniRef50_B5JV63 LysR protein n=1 Tax=gamma proteobacterium HTCC5... 205 2e-51 UniRef50_Q6MJZ8 Transcriptional regulator, LysR family n=1 Tax=B... 205 2e-51 UniRef50_C0BKK6 Transcriptional regulator, LysR family n=1 Tax=F... 204 3e-51 UniRef50_A8RPQ8 Putative uncharacterized protein n=2 Tax=Clostri... 204 4e-51 UniRef50_B6FPK4 Putative uncharacterized protein n=1 Tax=Clostri... 204 4e-51 UniRef50_A8FAC2 Possible LysR family transcriptional regulator n... 204 4e-51 UniRef50_C8KY54 Transcriptional regulator, LysR family protein n... 204 4e-51 UniRef50_Q2RZH0 Transcriptional regulator, LysR family n=1 Tax=S... 203 8e-51 UniRef50_C6D9U9 Transcriptional regulator, LysR family n=1 Tax=P... 203 8e-51 UniRef50_A6DK62 Hydrogen peroxide-inducible genes activator n=1 ... 203 8e-51 UniRef50_Q2RLB0 Transcriptional regulator, LysR family n=1 Tax=M... 202 1e-50 UniRef50_P0ACQ6 Hydrogen peroxide-inducible genes activator n=27... 201 2e-50 UniRef50_C9KJW7 Transcriptional regulator, LysR family n=2 Tax=V... 201 3e-50 UniRef50_A0RKW5 Transcriptional regulator, LysR family n=81 Tax=... 201 3e-50 UniRef50_Q0RXH6 Transcriptional regulator, LysR family protein n... 200 4e-50 UniRef50_C6E9D5 Transcriptional regulator, LysR family n=8 Tax=D... 200 6e-50 UniRef50_UPI000178A79D transcriptional regulator, LysR family n=... 200 6e-50 UniRef50_UPI0001C36638 LysR family transcriptional regulator n=1... 200 6e-50 UniRef50_C6IVL6 Transcriptional regulator YwqM n=1 Tax=Paenibaci... 200 7e-50 UniRef50_D0SSL1 Transcriptional regulator n=2 Tax=Acinetobacter ... 199 8e-50 UniRef50_Q3A916 Transcriptional regulator, LysR family n=1 Tax=C... 199 8e-50 UniRef50_B1I114 Transcriptional regulator, LysR family n=1 Tax=C... 199 9e-50 UniRef50_P49518 Probable RuBisCO transcriptional regulator n=3 T... 199 1e-49 UniRef50_C6D4H5 Transcriptional regulator, LysR family n=4 Tax=B... 199 1e-49 UniRef50_B8FI63 Transcriptional regulator, LysR family n=1 Tax=D... 199 2e-49 UniRef50_Q65FY0 Probable transcriptional regulator YwqM n=1 Tax=... 198 3e-49 UniRef50_C0ZGB6 Transcriptional regulator n=1 Tax=Brevibacillus ... 198 3e-49 UniRef50_Q81BG8 Transcriptional regulators, LysR family n=8 Tax=... 197 3e-49 UniRef50_A3IAK3 Transcriptional regulators, LysR family protein ... 197 3e-49 UniRef50_A4A328 Transcriptional regulator, lysr family protein n... 197 4e-49 UniRef50_Q3IDU2 Putative hydrogen peroxide-inducible genes activ... 197 5e-49 UniRef50_B2JSK1 Transcriptional regulator, LysR family n=1 Tax=B... 197 6e-49 UniRef50_A0LBV6 Transcriptional regulator, LysR family n=1 Tax=M... 197 6e-49 UniRef50_C6CYK3 Transcriptional regulator, LysR family n=3 Tax=B... 196 7e-49 UniRef50_B0MW77 Putative uncharacterized protein n=1 Tax=Alistip... 196 7e-49 UniRef50_C6D237 Transcriptional regulator, LysR family n=2 Tax=B... 196 8e-49 UniRef50_A0LJJ0 Transcriptional regulator, LysR family n=2 Tax=B... 196 9e-49 UniRef50_C0CW97 Putative uncharacterized protein n=1 Tax=Clostri... 196 1e-48 UniRef50_A8FC55 LysR family transcriptional regulator n=2 Tax=Ba... 196 1e-48 UniRef50_UPI0001C42298 LysR family transcriptional regulator n=1... 195 1e-48 UniRef50_C0CQV4 Putative uncharacterized protein n=1 Tax=Blautia... 195 1e-48 UniRef50_A6VSP2 Transcriptional regulator, LysR family n=1 Tax=M... 195 2e-48 UniRef50_C9KMN5 Transcriptional regulator, LysR family n=1 Tax=M... 195 2e-48 UniRef50_P94387 Uncharacterized HTH-type transcriptional regulat... 195 2e-48 UniRef50_B3DZ70 Transcriptional regulator, LysR/CysB family n=5 ... 194 3e-48 UniRef50_C2FUK4 Transcriptional regulator n=2 Tax=Sphingobacteri... 194 3e-48 UniRef50_B7JB31 Rubisco operon transcriptional regulator n=5 Tax... 194 3e-48 UniRef50_B7WRI3 Transcriptional regulator, LysR family n=1 Tax=C... 194 4e-48 UniRef50_C6DI39 Transcriptional regulator, LysR family n=1 Tax=P... 193 4e-48 UniRef50_A4G228 Transcriptional regulatory protein, LysR family ... 193 8e-48 UniRef50_C8W2X0 Transcriptional regulator, LysR family n=1 Tax=D... 193 8e-48 UniRef50_Q123J4 Transcriptional regulator, LysR family n=1 Tax=P... 193 9e-48 UniRef50_B5EHW2 Transcriptional regulator, LysR family n=5 Tax=D... 192 1e-47 UniRef50_B2SBJ3 ALS operon regulatory protein n=36 Tax=Proteobac... 192 1e-47 UniRef50_B4CZS1 Transcriptional regulator, LysR family n=1 Tax=C... 192 1e-47 UniRef50_D1UNR7 Transcriptional regulator, LysR family n=1 Tax=B... 192 1e-47 UniRef50_C6XNZ9 Transcriptional regulator, LysR family n=1 Tax=H... 192 2e-47 UniRef50_C7I0K1 Transcriptional regulator, LysR family n=1 Tax=T... 192 2e-47 UniRef50_B0PCN4 Putative uncharacterized protein n=2 Tax=Bacteri... 191 3e-47 UniRef50_C7RSN5 Transcriptional regulator, LysR family n=1 Tax=C... 191 3e-47 UniRef50_Q6FDZ3 Putative transcriptional regulator n=1 Tax=Acine... 190 4e-47 UniRef50_C3K9K8 Cyn operon positive regulator n=1 Tax=Pseudomona... 190 4e-47 UniRef50_Q47V10 Hydrogen peroxide-inducible genes activator n=1 ... 190 4e-47 UniRef50_Q13T34 Transcriptional regulator, LysR family n=60 Tax=... 190 4e-47 UniRef50_C7QKA9 Transcriptional regulator, LysR family n=1 Tax=C... 190 5e-47 UniRef50_D0KYG7 Transcriptional regulator, LysR family n=3 Tax=G... 190 6e-47 UniRef50_B9MIR3 Transcriptional regulator, LysR family n=4 Tax=B... 190 6e-47 >UniRef50_C6XIT5 Transcriptional regulator, LysR family n=1 Tax=Hirschia baltica ATCC 49814 RepID=C6XIT5_HIRBI Length = 318 Score = 262 bits (671), Expect = 1e-68, Method: Composition-based stats. Identities = 74/314 (23%), Positives = 131/314 (41%), Gaps = 21/314 (6%) Query: 6 TTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPT 65 DLNLL L +ER+VT+AA+R+NVT AVS +L++LR F D LF+ +P G+ PT Sbjct: 3 KKFDLNLLNTFDALWRERNVTRAARRLNVTQPAVSNALSRLRETFGDELFIRTPSGVDPT 62 Query: 66 PLMVSMEQNLAEWMQMSNLLLDKPHHQTP--RGLKFELAAESPLMMIMLNALSKQIYQRY 123 + ++ E ++ L P F + A ++L L + + ++ Sbjct: 63 ERCSEIAIDVREALRHVERTLASHDSFDPTVSERTFRIGAMDYFDHVVLPPLMEDLRKKA 122 Query: 124 PQATIKLRNWD-YDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCV 182 P+ +++ ++ DA+ G++D F P I++ + + + Sbjct: 123 PRVDLRISPVKLGETYDALDSGDLDFLFFSGTEP----------PKRINFSPMLEEKFVL 172 Query: 183 WLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 +R +HP + Q LD + HI +D++L E G R +A++ Sbjct: 173 IMRANHPKMCQEMTLDAYADLTHIVFSTRGDSHTRIDDLLAENGLRRRVALTSSHHTSIA 232 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 D + L+ R Y L V P+ F L W +R + +P Sbjct: 233 ETVRDTDMVALS-PSRLAHRYVHRGGLIAVQPPVEFP-------HFHLRLYWSRRLNSDP 284 Query: 303 KIVWLRETIKNLYA 316 +WLR + ++ Sbjct: 285 GAMWLRNILGDVCK 298 >UniRef50_B9Z480 Transcriptional regulator, LysR family n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z480_9NEIS Length = 303 Score = 260 bits (665), Expect = 6e-68, Method: Composition-based stats. Identities = 76/317 (23%), Positives = 124/317 (39%), Gaps = 20/317 (6%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 + T D+ LL + + RSVT+AA + + AVS +LAKLR FDDPLFV G+ P Sbjct: 1 MQTADVRLLQVFDEIYKTRSVTRAADNLGLGQPAVSIALAKLREHFDDPLFVRIANGMEP 60 Query: 65 TPLMVSMEQNLAEWMQMSNLLLDKPHHQTPR--GLKFELAAESPLMMIMLNALSKQIYQR 122 TP+ +E + + + +L+ P F ++ +++L L Q+ + Sbjct: 61 TPMARELEHAVRQALDALDLVFGHRIDFDPASSERTFCISMTDISQLVLLPKLWAQLRKT 120 Query: 123 YPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCV 182 P I + ++ + GE D+ + L + LF Sbjct: 121 SPGVHIDIVPLSAETPRMLETGEADLALGF----------MPQLEAGFYQQSLFRQRYVC 170 Query: 183 WLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 DHP +H L F H + + LD + G R IA+ +P + Sbjct: 171 VASTDHPRIHDELTLAQFETEEHAVVTSSGTGHLILDREIARQGITRHIALRVPNYLGIA 230 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 F+ Q D L + R Q + + +P + WH+R H+P Sbjct: 231 FVVEQTDML-VTIPERLAQVLEGRGRFRVFPVPFELP-------DYAVKQHWHERYHHDP 282 Query: 303 KIVWLRETIKNLYASMA 319 WLR I +L ++ A Sbjct: 283 GNRWLRRVISDLLSAPA 299 >UniRef50_A7ZTR6 HTH-type transcriptional regulator yidZ n=122 Tax=Gammaproteobacteria RepID=YIDZ_ECO24 Length = 319 Score = 254 bits (649), Expect = 4e-66, Method: Composition-based stats. Identities = 316/319 (99%), Positives = 319/319 (100%) Query: 1 MKKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPL 60 MKKSITTLDLNLLLCLQLLMQERSVTKAAKR+NVTPSAVSKSLAKLRAWFDDPLFVNSPL Sbjct: 1 MKKSITTLDLNLLLCLQLLMQERSVTKAAKRMNVTPSAVSKSLAKLRAWFDDPLFVNSPL 60 Query: 61 GLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIY 120 GLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSK+IY Sbjct: 61 GLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKRIY 120 Query: 121 QRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 QRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP Sbjct: 121 QRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 Query: 181 CVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQ 240 CVWLRKDHPALH+TWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQ Sbjct: 181 CVWLRKDHPALHETWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQ 240 Query: 241 SLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 SLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH Sbjct: 241 SLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 Query: 301 NPKIVWLRETIKNLYASMA 319 NPKIVWLRETIKNLYASMA Sbjct: 301 NPKIVWLRETIKNLYASMA 319 >UniRef50_Q5P743 Transcriptional regulator, LysR family n=2 Tax=Betaproteobacteria RepID=Q5P743_AZOSE Length = 301 Score = 251 bits (643), Expect = 2e-65, Method: Composition-based stats. Identities = 67/315 (21%), Positives = 122/315 (38%), Gaps = 20/315 (6%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 + TL++ L + + RSV++AA+ + + AVS +L KLR F DPLFV + G+ P Sbjct: 1 METLEIRQLSVFDEIYKTRSVSRAAENLGLGQPAVSIALGKLREHFGDPLFVRTSAGMEP 60 Query: 65 TPLMVSMEQNLAEWMQMSNLLLDKPHHQTP--RGLKFELAAESPLMMIMLNALSKQIYQR 122 TPL + + + + + P F +A +++L L +++ Sbjct: 61 TPLGEELAEPIRVAVAAVSAASGHRAEFDPTRARRTFRIAMTDISQLVLLPRLWERLRTV 120 Query: 123 YPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCV 182 P I + N ++ + GEVD+ + L + LF Sbjct: 121 APGIHIDIANLSANTAGMLESGEVDVALGF----------MPQLEAGFYQQALFRQHYVC 170 Query: 183 WLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 HP + + L F H + + +D + +R + + +P F Sbjct: 171 MASATHPRIRRGLTLAQFEAEEHAVVSTSGTGHLIIDREIARQDIKRRVVLRIPSFVGIA 230 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 ++ + LL+ R + +L + +P P E WH R +++P Sbjct: 231 YVVERT-ALLVTIPQRLGELLADEERLRVYPVPFPLP-------EYAVKQHWHGRYNNDP 282 Query: 303 KIVWLRETIKNLYAS 317 WLR I+ L +S Sbjct: 283 GNRWLRALIQELLSS 297 >UniRef50_A6T413 Transcriptional regulator, LysR family n=1 Tax=Janthinobacterium sp. Marseille RepID=A6T413_JANMA Length = 302 Score = 249 bits (636), Expect = 1e-64, Method: Composition-based stats. Identities = 75/320 (23%), Positives = 134/320 (41%), Gaps = 23/320 (7%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 +I ++DLNLL+ +++ER+VT AA R+ V+ A+S +LA+LR F+DPLFV + G+ Sbjct: 1 MNIASVDLNLLVAFDAIVKERNVTSAAVRLGVSQPAMSNALARLRIIFNDPLFVRTSQGM 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLD--KPHHQTPRGLKFELAAESPLMMIMLNALSKQIY 120 PTP + + ++ ++ L F +++L L K I Sbjct: 61 QPTPYAEQLIEPVSRACELITSALQINSVFDPATTTKTFSFYMTEIGEILLLPKLLKHIQ 120 Query: 121 QRYPQATIKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 P A +++R +A+ GE+D+ L L + L++D Sbjct: 121 VAAPNACVRVRRIPEQGAKEAMANGEIDLAVG----------LFPYLKAGFYQQRLYTDK 170 Query: 180 PCVWLRKDHPALHQTWNLDTFLRYPH-ISICWEQSDTWALDNVLQELGRERTIAMSLPEF 238 +R+ HP +H + ++ PH I + A++ +L R I M+ F Sbjct: 171 FACIVRQGHPTVHDSLTPQQYVDTPHVIVMSANTGHDAAIEKILLTEHLRRKIVMTSQNF 230 Query: 239 EQSLFMAAQPDNLLLATAPRYCQYYNQ-LHQLPLVALPLPFDESQQKKLEVPFTLLWHKR 297 + Q D + R Q + ++ P+PF V WH+R Sbjct: 231 LVLPMIIEQTDAIA-TIPFRMAQKIASYSTGIKILESPIPFPN-------VDIKQHWHER 282 Query: 298 NSHNPKIVWLRETIKNLYAS 317 ++P W+R+ + L+ Sbjct: 283 FHYDPANKWMRDLMVTLFRE 302 >UniRef50_A9VF88 Transcriptional regulator, LysR family n=77 Tax=Bacillales RepID=A9VF88_BACWK Length = 305 Score = 249 bits (636), Expect = 1e-64, Method: Composition-based stats. Identities = 39/315 (12%), Positives = 100/315 (31%), Gaps = 22/315 (6%) Query: 7 TLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTP 66 +++L L + +E T+AA+++N++ ++S+ + L PLF +S T Sbjct: 8 SIELRQLEYFLAVSKELHFTRAAEKLNISQPSLSQQIRALEHEVGMPLFDRIGKKISLTE 67 Query: 67 LMVSMEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQIYQRYPQ 125 + + + + ++ +L ++YP Sbjct: 68 AGRVLLSHSKTIFHEVEQARSAIQDLNGLHHGSLTIGSLLTVVNYLLPPAILDFNKQYPN 127 Query: 126 ATIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 + + + + + + E+DIG + I L+ + + Sbjct: 128 IELSVLGLRTGEIREKLLQNELDIGITFLPVQ----------DKEIVSIPLYKSELTLVV 177 Query: 185 RKDHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 H + +++ YP I + T + + Q + + + E + Sbjct: 178 PTSHSLTERKYVSIEELQDYPLILLPKNFYLTELITSHCQNFNFKPKPILEISTMESLIQ 237 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 M AQ + + P+ + Q + + + + + L++ + Sbjct: 238 MVAQ--GMGITVLPKPYIDFLQNEHIQAI-------KIENPTPTIDIGLIYRRDKYMCAA 288 Query: 304 IVWLRETIKNLYASM 318 E +K S+ Sbjct: 289 TRKFIEQLKITVHSL 303 >UniRef50_C3KKF8 Putative transcriptional regulatory protein, LysR-family n=1 Tax=Rhizobium sp. NGR234 RepID=C3KKF8_RHISN Length = 304 Score = 247 bits (632), Expect = 4e-64, Method: Composition-based stats. Identities = 77/317 (24%), Positives = 133/317 (41%), Gaps = 21/317 (6%) Query: 4 SITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLS 63 +I ++DLNLL+ L+ E T+AA+RI +T AVS +L +LRA F DPLFV SP G+ Sbjct: 5 NIASIDLNLLVVFDALVAEGHATRAAERIGLTQPAVSHALNRLRALFGDPLFVRSPRGMV 64 Query: 64 PTPLMVSMEQNLAEWMQMSNLLLD--KPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQ 121 TP + + ++ ++L +F L ++L L+ ++ + Sbjct: 65 ATPAALDAAPAIRSILEQVEVVLSGGPAFEPEESTRQFVLGLSDYAAFVLLPRLTARLER 124 Query: 122 RYPQATIKLRNWDYDS-LDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 P ++ +RN + L + G V++ P + E+L+ + Sbjct: 125 EAPNISLVIRNTSHGVGLPMLEEGSVELI----------AGNFPGPPSHMREELLYEEDF 174 Query: 181 CVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQ 240 R DHPAL +LD +L H+ + + +D VL E G +R +A+++ F Sbjct: 175 VCAGRGDHPALAYPLDLDRYLSLRHLQVSTRGNPHGYVDAVLAERGLKRKVAVTVGHFLM 234 Query: 241 SLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 + F+ D + R + L A P+ WH R+ Sbjct: 235 APFLVDSSDLVA-TEPRRLFEPMPSRLPLRFFAPPIDLP-------PFRVVQAWHARHEA 286 Query: 301 NPKIVWLRETIKNLYAS 317 +P WLR ++ + Sbjct: 287 DPGHQWLRRVLREISQR 303 >UniRef50_A1W256 Transcriptional regulator, LysR family n=2 Tax=Comamonadaceae RepID=A1W256_ACISJ Length = 323 Score = 247 bits (631), Expect = 5e-64, Method: Composition-based stats. Identities = 71/317 (22%), Positives = 123/317 (38%), Gaps = 12/317 (3%) Query: 4 SITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLS 63 + TLDLNLL +M ER++T+AA+++ +T AVS +L +LR D L G+ Sbjct: 5 NFRTLDLNLLRVFDEVMAERNLTRAAEKLAITQPAVSNALRRLREVLGDELVTRRGHGVE 64 Query: 64 PTPLMVSMEQNLAEWMQMSNLLLDK-PHHQTPRGLKFELAAESPLMMIMLNALSKQIYQR 122 PTP +++ + + L F LA ++ L + + + Sbjct: 65 PTPRALALWPAVRHALAQLQETLSPGRFDPASAQTTFVLAMADATGATLIPPLIEIVERE 124 Query: 123 YPQATIKLRNWDYDSLDAITRGE-VDIGFSGRESHPRSRELLSSLPLAIDYE--VLFSDV 179 P ++++ + E D+ + + + +E L+ Sbjct: 125 APGVSLRVVPLTTRDPRRLLDEESADMAVGYFPAVLADLTARAQSDNVVAHESTRLYDSQ 184 Query: 180 PCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFE 239 +R DHP LD + H+ + + +D L LGRER I +++ +F Sbjct: 185 YVCVMRADHPLAAVPMTLDLYCAARHLLVSFSGKPFGFIDGALAALGRERRIVLTVNQFF 244 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 + + A D LL + + +L LP+ V LWH+R + Sbjct: 245 TAGRVVATTD-LLTVLPRHFVGVASVRDELVWRPLPMTLP-------PVHVDALWHRRRN 296 Query: 300 HNPKIVWLRETIKNLYA 316 H+P WLRE I Sbjct: 297 HDPAHRWLREAIARAAR 313 >UniRef50_A9G5G2 Nodulation protein D n=2 Tax=Proteobacteria RepID=A9G5G2_SORC5 Length = 366 Score = 246 bits (629), Expect = 8e-64, Method: Composition-based stats. Identities = 74/315 (23%), Positives = 140/315 (44%), Gaps = 18/315 (5%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 + ++DLNL+ L L+ ER +T+A KR+ +T SA S +L +LR F DPLFV + GL Sbjct: 61 HDVASVDLNLVRVLGALLDERHLTRAGKRLGLTQSATSHALGRLRRLFGDPLFVRTSRGL 120 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLD--KPHHQTPRGLKFELAAESPLMMIMLNALSKQIY 120 +PT + + + E M+ + +P F +A ++ L ++ Sbjct: 121 APTARAEELAEPVREAMRALDRCFRAEEPFVAASAARSFSVATADYGSFVLAPKLLDRLG 180 Query: 121 QRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 + P + LR D + + RG+ D+ + LP I +L+ + Sbjct: 181 REAPNVDLWLRALDASFEEQLARGDADVVVAPARRDG--------LPAGIHSRLLYRERF 232 Query: 181 CVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQ 240 +RK HP + + +L ++ H+ I + +D L +LG+ R +A+++P F Sbjct: 233 ACLVRKGHPLVKKGIDLASWTSMRHVFIAPRGTPGGVVDETLAQLGKRRRVALAVPHFLL 292 Query: 241 SLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 + + A D L++ R + + ++ L +V P+ + WH+R+ Sbjct: 293 APHVVAGSD-LVVTVGARVAEAFAEILPLRVVDPPVKLP-------GFEVRMYWHERHHR 344 Query: 301 NPKIVWLRETIKNLY 315 +P W R+ ++ Sbjct: 345 DPAQQWFRDAVRGAA 359 >UniRef50_Q12H69 Transcriptional regulator, LysR family n=14 Tax=Burkholderiales RepID=Q12H69_POLSJ Length = 342 Score = 244 bits (623), Expect = 4e-63, Method: Composition-based stats. Identities = 74/317 (23%), Positives = 125/317 (39%), Gaps = 12/317 (3%) Query: 4 SITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLS 63 + TLDLNLL +M ERS+T+AA+ +++T AVS +L +LR D L S G++ Sbjct: 29 NFRTLDLNLLRVFDEVMAERSLTRAARNLSLTQPAVSNALRRLRETLGDELVQRSGQGMA 88 Query: 64 PTPLMVSMEQNLAEWMQMS-NLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQR 122 PTP ++ + E +Q L+ F LA ++ L + + Q Sbjct: 89 PTPRARAIWPAVREALQRLQESLIPDEFVPGQATTTFVLAMADATAAELIPGLIETLEQE 148 Query: 123 YPQATIKLRNWDYDSLDAITRGEV-DIGFSGRESHPRSRELLSSL--PLAIDYEVLFSDV 179 P ++++ + + D+ S + P+ + L+ Sbjct: 149 APGVSMRVIPLTTRDPRRLLDEQACDLAVGYFPSVLADLTAHAQSGEPMPFQHRRLYDGE 208 Query: 180 PCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFE 239 +RK HP LD F H+ + + +D L LGRER + +++ +F Sbjct: 209 YVCVMRKGHPLASGPLTLDRFCAARHMLVSFSGRPYGFIDESLASLGRERQVVLTVNQFF 268 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 + + A + LL + + QL L LP V +WH+R+ Sbjct: 269 TAGRVVANSN-LLTVLPRHFVRVTGIAEQLVLRPLPFDVSA-------VHVDAVWHRRSQ 320 Query: 300 HNPKIVWLRETIKNLYA 316 VWLRE + Sbjct: 321 QRGAHVWLREAVLRAAD 337 >UniRef50_Q3KA14 LysR family regulatory protein n=24 Tax=Bacteria RepID=Q3KA14_PSEPF Length = 314 Score = 244 bits (623), Expect = 4e-63, Method: Composition-based stats. Identities = 66/320 (20%), Positives = 134/320 (41%), Gaps = 25/320 (7%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 +++ +DLNL + + E ++T+A + + +T AVS +LA+LR F+DPLFV + G+ Sbjct: 1 MNLSKVDLNLFIVFDAIYTEANLTRAGQIVGITQPAVSNALARLRETFNDPLFVRTAQGM 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGL--KFELAAESPLMMIMLNALSKQIY 120 PTP+ ++ + + + + + + P + ++ ++L L +++ Sbjct: 61 VPTPMAQNIIGPVRNALSLLRVSVQESRIFNPSQAVKTYRISMTDLTEAVILPPLFQRLR 120 Query: 121 QRYPQATIK-LRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 + P I+ + ++ + G +D + + + L D Sbjct: 121 RLAPTVIIESFLSKRRETTKELAAGRLDFAVDAPL----------NTDPQVRHVKLMEDR 170 Query: 180 PCVWLRKDHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEF 238 +RK HP + + LD +L HI I +S +D L ++G +R IA+ + Sbjct: 171 YVCAMRKGHPLATKEKFTLDDYLSLTHIHISSRRSGLGHVDLALGKMGIQRKIALRSQHY 230 Query: 239 EQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRN 298 + + Q D ++ + + + H L LP+ V L WH+ Sbjct: 231 LMASQVLQQTDMVMTVP-----ERFARRHDLHAFNLPV------NDVPPVETHLYWHEST 279 Query: 299 SHNPKIVWLRETIKNLYASM 318 +P W+RE + L + Sbjct: 280 DQDPANRWMREQMIELCQQV 299 >UniRef50_C6CY97 Transcriptional regulator, LysR family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CY97_PAESJ Length = 305 Score = 243 bits (622), Expect = 5e-63, Method: Composition-based stats. Identities = 50/315 (15%), Positives = 103/315 (32%), Gaps = 23/315 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L + ++ VT+AA+ ++V SAVS+ + +L LF+ L TP+ Sbjct: 1 MELRQLYYFVKVAKKEHVTQAAEELHVAQSAVSRQIHQLEEELGVKLFLQKGRNLQLTPV 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQ-TPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + + + H P + L L + ++ + + +P Sbjct: 61 GQLFLKRAEVILDDLERAVVEIHEFMDPEKGEIRLGFPHSLGVSVVPQVVAAFRKLHPNV 120 Query: 127 TIKLRN-WDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + R + + +GE+D+ F + EVL ++ L Sbjct: 121 KFRFRQGMYPSLIRDMVKGEIDLAFISP---------FPDEHEQVCGEVLLTEELFAILP 171 Query: 186 KDHPALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 HP Q +L + S + QE G I E E + Sbjct: 172 PSHPLAGEQEIDLIQLKEDTFVMFSEGYSLRPIVWEACQEAGFTPKIGFEGEETETIRGL 231 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 A + ++ P Y+ + Q V + + + ++ H+ N P + Sbjct: 232 VAA--GMGVSLLPEMALYHAGVLQSAKVRV-------RTPNVTRNIGII-HRSNEKMPLV 281 Query: 305 VW-LRETIKNLYASM 318 + + + Sbjct: 282 AKVFHGFLLRYFNEL 296 >UniRef50_Q2S713 Transcriptional regulator n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2S713_HAHCH Length = 329 Score = 243 bits (621), Expect = 6e-63, Method: Composition-based stats. Identities = 66/310 (21%), Positives = 135/310 (43%), Gaps = 20/310 (6%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 + +DLNLL+ +M E S++ AA+R+++T AVS ++A++R ++DPLFV + G+ P Sbjct: 1 MRNIDLNLLVIFDAIMTESSISGAAERLSMTQPAVSNAVARMRQVWNDPLFVKNGRGIQP 60 Query: 65 TPLMVSMEQNLAEWMQMSNLLLDKP-HHQTPRGLKFELAAESPLMMIMLNALSKQIYQRY 123 T +S+ ++ + ++ + +F + ++ + + + Sbjct: 61 TTHALSLWHQVSGPLIQLKDAVNPQDFDPSTTRRRFRVGMSDITTDLIWLPMRRMVETEA 120 Query: 124 PQATIKLRNWDYDSLDA-ITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCV 182 P + + ++ ++ +T GEVD+ ++ + + LF Sbjct: 121 PNIDLHAVPANGNNSESILTNGEVDLIVG----------VMQEFRTSFRNDFLFESDYVC 170 Query: 183 WLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 +RKDHP + L+ +L+ H+ + T +D L + G R +AM++ F Sbjct: 171 AMRKDHPLAAEPLTLEKYLKADHLLVSLTGEATGFVDITLSQQGLSRRVAMTVNHFASVP 230 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 + D + + + L + PL P +++WH R+ +P Sbjct: 231 ALLEGSDLISI-VPNMVIAKGAKCGSLHVTKPPLEIR-------PTPVSMIWHARHDRDP 282 Query: 303 KIVWLRETIK 312 ++WLRE IK Sbjct: 283 GVLWLREKIK 292 >UniRef50_Q13QG3 Transcriptional regulator, LysR family n=9 Tax=Proteobacteria RepID=Q13QG3_BURXL Length = 316 Score = 243 bits (621), Expect = 6e-63, Method: Composition-based stats. Identities = 71/314 (22%), Positives = 125/314 (39%), Gaps = 21/314 (6%) Query: 9 DLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLM 68 DLNLL + RS+T A +R+ +T AVS +L +LRA FDDPLFV +P G+ PT Sbjct: 10 DLNLLRVFLAISDLRSLTAAGERLGLTQPAVSHALRRLRALFDDPLFVRTPTGMVPTDAA 69 Query: 69 VSMEQNLAEWMQMSNLLLDKPHHQTP--RGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + L + + N+ + + P F ++ L L + + Sbjct: 70 LRLHAPLTQAFGIINVAVQQIARFDPATAQRVFRVSMSDMSEFYFLPPLLSMLDRSARGI 129 Query: 127 TIKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 +++ N DS+ A+ GE+D+ + L + LF D +R Sbjct: 130 RLEIANVSVDSVSSAMRSGEIDLALGY----------VPGLDTGCVSKTLFVDEHVCVVR 179 Query: 186 KDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMA 245 HP Q + ++ + ++ L+EL R I + LP F + + Sbjct: 180 AGHPLRKQKPTKEDLANLRYVYASTNATGHRMVEQWLEELNLRRDIVLRLPHFVVAPEIV 239 Query: 246 AQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIV 305 D ++ Q +N+ ++ LP + + H + S +P I Sbjct: 240 QHTDLAMI-FPRSIAQRFNRNKAFRILPLPFALP-------PIEIQVHSHSQFSADPGIA 291 Query: 306 WLRETIKNLYASMA 319 WL + I +++ A Sbjct: 292 WLLDAIYDMFHQPA 305 >UniRef50_A1WRT3 Transcriptional regulator, LysR family n=1 Tax=Verminephrobacter eiseniae EF01-2 RepID=A1WRT3_VEREI Length = 315 Score = 242 bits (620), Expect = 9e-63, Method: Composition-based stats. Identities = 73/318 (22%), Positives = 129/318 (40%), Gaps = 20/318 (6%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 ++ +LNLL + + RSV+ AA+ +++T AV+ +L KLR FD+PLFV + G+ Sbjct: 1 MDLSEFNLNLLTFFDAIYRHRSVSAAAQELDLTQPAVTAALNKLRVHFDNPLFVRTSNGM 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKP-HHQTPRGLKFELAAESPLMMIMLNALSKQIYQ 121 PTP ++ +A + L + +F++ MM+ L + + + Q Sbjct: 61 HPTPWADALAPKIAHVLDSVRRLDEPTPFQPQSAKNQFKIYVNDIGMMLALPKIVQLLNQ 120 Query: 122 RYPQATIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 P + + + + ++A+ GE+D+ +P + L Sbjct: 121 DAPHTQLTVIDLRQDEVVNALDVGEIDLAIGY----------FVGVPNWARQQHLRDTSY 170 Query: 181 CVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQ 240 +RKDHP++ T L +L H S LD L + G R IA+ +P Sbjct: 171 VCAMRKDHPSIGDTMTLTQYLNARHAMYWTHGSTYGRLDEALAKRGFSRDIAVRIPRLGA 230 Query: 241 SLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 F+AA D + + + L + LV +P+ WH+R Sbjct: 231 IPFLAAFSDFV-VTIPEDLGLLFRDLIPIKLVPVPISLP-------SFQVKQYWHERLHA 282 Query: 301 NPKIVWLRETIKNLYASM 318 + WLR I + + Sbjct: 283 DSAHKWLRTLILQIMKQL 300 >UniRef50_Q7W2A6 Transcriptional regulator n=3 Tax=Bordetella RepID=Q7W2A6_BORPA Length = 313 Score = 242 bits (619), Expect = 1e-62, Method: Composition-based stats. Identities = 82/318 (25%), Positives = 141/318 (44%), Gaps = 22/318 (6%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 LDLNLL+ ++ E VT+AA+R+ ++ SAVSK LA+LR F DPLF+ + G+ Sbjct: 1 MIAKHLDLNLLMIFDAILAEGHVTRAAERLAMSQSAVSKGLAQLRQAFGDPLFLRASRGV 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQIY 120 PT + + + + + N L R F + A + ++L L +++ Sbjct: 61 VPTHRALEIADQVRQAIAALNSLAGPVTEFDARSAHAHFNIGATDYVSFVLLPGLMRRLQ 120 Query: 121 QRYPQATIKLRNWDYDS-LDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 + P ++ L + + + + G+VD+ S ++S+ I + LF D Sbjct: 121 ETAPHVSLTLHDMESMMPEEMLLAGKVDLVISS----------VASVNFPIYRQELFRDH 170 Query: 180 PCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDT-WALDNVLQELGRERTIAMSLPEF 238 R HPAL ++ F+ H+++ + L + LQ LG R +A+ +P Sbjct: 171 YVCLCRAGHPALADPVPIEQFVSSRHLAMPRQNGARERVLQDTLQRLGVTRDVAVQVPHM 230 Query: 239 EQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRN 298 D + A R + + H L ++A PLP + P + LWH R Sbjct: 231 LAIPATLTATDLVA-TMACRVAREFAARHPLQVLAHPLPLP-------DFPVSQLWHDRT 282 Query: 299 SHNPKIVWLRETIKNLYA 316 +P WLR+T+ +L Sbjct: 283 RRSPSHQWLRDTVYDLAR 300 >UniRef50_B4X4B4 LysR substrate binding domain protein n=1 Tax=Alcanivorax sp. DG881 RepID=B4X4B4_9GAMM Length = 304 Score = 241 bits (617), Expect = 2e-62, Method: Composition-based stats. Identities = 70/319 (21%), Positives = 131/319 (41%), Gaps = 21/319 (6%) Query: 1 MKKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPL 60 MK ++ ++DLNLL +M+ +++AA+ + ++ A+S +L +LR F D LFV + Sbjct: 1 MKLNLRSIDLNLLPVFDAIMEAGQLSRAAESLGMSQPAISAALQRLRHTFGDTLFVRTHH 60 Query: 61 GLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPR--GLKFELAAESPLMMIMLNALSKQ 118 G++PTP + L + L+ + P F + + M++L L Sbjct: 61 GMTPTPRARELHDQLGPQLVALRDTLNPENRFDPATSQRHFRILSVDYFEMVVLGPLLAT 120 Query: 119 IYQRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSD 178 + Q+ P +++ D D D + +G D+ S + + + VL + Sbjct: 121 LRQQAPHVVLEIIAADDDMPDELHKGRADL----------SVDAFVADDDRLQRNVLLEE 170 Query: 179 VPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEF 238 V R+ HP + + FL H+ + LD +L G +R + +F Sbjct: 171 KLVVIARRSHPHIKGHCDKQQFLDAEHVVLPNRNR-QLPLDQILNAPGWQRRTGARVTQF 229 Query: 239 EQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRN 298 L + D + R Q Y + QL ++ P+ VP ++W Sbjct: 230 ASMLAVCGGSDLIA-TVPDRLAQQYAETMQLQVLPFPVALP-------PVPIYMIWSPTQ 281 Query: 299 SHNPKIVWLRETIKNLYAS 317 +P WLR+ +++ A Sbjct: 282 QRDPAHRWLRQQLEHTIAQ 300 >UniRef50_P39592 Uncharacterized HTH-type transcriptional regulator ywbI n=9 Tax=Bacillales RepID=YWBI_BACSU Length = 301 Score = 241 bits (616), Expect = 2e-62, Method: Composition-based stats. Identities = 38/304 (12%), Positives = 87/304 (28%), Gaps = 23/304 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +D+ L + + +S TKA++ + V+ +SK + L LF + + T Sbjct: 1 MDIRHLTYFLEVARLKSFTKASQSLYVSQPTISKMIKNLEEELGIELFYRNGRQVELTDA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQ-TPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 SM E ++ L + + + + + + + YP Sbjct: 61 GHSMYVQAQEIIKSFQNLTSELNDIMEVKKGHVRIGLPPMIGSGFFPRVLGDFRENYPNV 120 Query: 127 TIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 T +L + + G +DIG ++ + + + + Sbjct: 121 TFQLVEDGSIKVQEGVGDGSLDIGVVVLPANEDI----------FHSFTIVKETLMLVVH 170 Query: 186 KDHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 H + L P I + + + G I +++ M Sbjct: 171 PSHRLADEKECQLRELKDEPFIFFREDFVLHNRIMTECIKAGFRPHIIYETSQWDFISEM 230 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 + + P ++ ++ L + ++W K + Sbjct: 231 VSANLGIG--LLPERICRGLDPEKVKVIPL-------VDPVIPWHLAIIWRKDRYLSFAA 281 Query: 305 V-WL 307 WL Sbjct: 282 RAWL 285 >UniRef50_Q12M05 Transcriptional regulator n=3 Tax=Gammaproteobacteria RepID=Q12M05_SHEDO Length = 309 Score = 241 bits (616), Expect = 3e-62, Method: Composition-based stats. Identities = 71/318 (22%), Positives = 136/318 (42%), Gaps = 19/318 (5%) Query: 1 MKKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPL 60 M ++ LDLNLL+ +M+E+S++ AA+++ +T +VS ++A++R + DPLF+ Sbjct: 1 MSAGMSKLDLNLLVIFDAIMKEQSISAAAEQLAMTQPSVSNAVARMRHNWKDPLFIKQGR 60 Query: 61 GLSPTPLMVSMEQNLAEWMQMSNLLLDK-PHHQTPRGLKFELAAESPLMMIMLNALSKQI 119 G+ P+P +++ Q +A ++ + + F +A + AL + + Sbjct: 61 GIKPSPFALALWQQVASPLEQIRSAVSSKTFNAAHSERTFRIAITDGTSGLFWPALRRHL 120 Query: 120 YQRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 + P+ + + D + EVD+ E + I + LF + Sbjct: 121 ERHAPKINLHAVPYKLDGEALLVNAEVDLVLDYYE----------NRHPQILSQHLFDNQ 170 Query: 180 PCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFE 239 + K H +T LD F H+ + + +D L +LG R IAM++ F Sbjct: 171 FVCVMAKAHALSEKTLTLDDFAAAEHLLVSLSGDASGTVDRKLAQLGHSRRIAMTVNSFA 230 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 + + + L+ + L +L + LP VP ++ WH RN Sbjct: 231 SAKTLIEES-RLISTLPYSIIASWQSLDKLTVKTLPFTVP-------SVPISMAWHSRND 282 Query: 300 HNPKIVWLRETIKNLYAS 317 + + WLRE I ++ + Sbjct: 283 ASISLRWLREAIVDIVKT 300 >UniRef50_C6ARG9 Transcriptional regulator, LysR family n=7 Tax=Proteobacteria RepID=C6ARG9_RHILS Length = 310 Score = 240 bits (615), Expect = 3e-62, Method: Composition-based stats. Identities = 67/314 (21%), Positives = 132/314 (42%), Gaps = 21/314 (6%) Query: 9 DLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLM 68 DLNLL LM+ER+VT+AA+++ +T AVS +L +LR DPLF+ G+ PT + Sbjct: 4 DLNLLPVFVALMEERNVTRAAEQLGMTQPAVSNALNRLRETLRDPLFIRERYGMKPTEMA 63 Query: 69 VSMEQNLAEWMQMSNLLL--DKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 ++ + + + ++ + +F +A S + +++ + ++ + P Sbjct: 64 EALAPVIRGALASLDDVILGQQAFDPARATRQFTIAPNSYVEFVLMPVIVARLRECAPGI 123 Query: 127 TIKLRNWDYDSLD-AITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 ++L + D + G ++ + P + + L D +R Sbjct: 124 RLRLTPFGNDLAETGAMSGATEMVLGR----------IVEPPDNMVVQHLMDDGLACVVR 173 Query: 186 KDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMA 245 KDHP + ++ + + + R H+++ L +LQ+ G R +++S+ F M Sbjct: 174 KDHPEIAESISEEQYQRMRHVNVLPPGRMRVGLFQMLQQAGLRRDVSVSVTHFLAVPEMV 233 Query: 246 AQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIV 305 A D C + +L ++ P+ P L WH R ++P Sbjct: 234 AVTDYCA-TLPRLICHRLARDPRLKVLPAPVDL-------GRFPVELAWHVRYRNDPAHR 285 Query: 306 WLRETIKNLYASMA 319 WLR I + ++ Sbjct: 286 WLRSLISEVAKEVS 299 >UniRef50_B1KAV0 Transcriptional regulator, LysR family n=5 Tax=Burkholderia cepacia complex RepID=B1KAV0_BURCC Length = 345 Score = 240 bits (614), Expect = 4e-62, Method: Composition-based stats. Identities = 74/318 (23%), Positives = 124/318 (38%), Gaps = 20/318 (6%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 I +DLNLL L+++R VT+A I ++ A+S +L+KLR F+DPLFV + G+ Sbjct: 1 MDIRQVDLNLLKVFDALLKKRHVTQAGVSIGLSQPAMSYALSKLRELFEDPLFVRTGRGM 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQIY 120 PTP ++ + +A + + + P F L M+ L L + Sbjct: 61 EPTPRAQALGEPVARLLDLVQTEILPMPEFRPAESSRNFVLCMSDIGEMVFLPRLESFLD 120 Query: 121 QRYPQATIKLRNWD-YDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 + P +IK + + + G+VD+ + + L+ Sbjct: 121 KAAPHVSIKTVALSMPELEEGLASGDVDLAIGYFPGLNSES---------LKRKALYRHS 171 Query: 180 PCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFE 239 R DHP + T +LD + H+ + E + L + LG + S P F Sbjct: 172 YVCIARDDHPEIGDTLSLDQYRAAAHVMVHPEGREQDVLARTHERLGIRVNVRFSTPRFI 231 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 F+ A D + A + + + + L+ LP P L WH R Sbjct: 232 GVPFVVAGSDMIA-AVPQAVGRRFAEFVNVKLLPLPFPAPT-------YELYLHWHPRFH 283 Query: 300 HNPKIVWLRETIKNLYAS 317 H P W+R+ + L Sbjct: 284 HEPANRWIRDAMSELVKG 301 >UniRef50_C9NXV6 Transcriptional regulator LysR family n=1 Tax=Vibrio coralliilyticus ATCC BAA-450 RepID=C9NXV6_9VIBR Length = 303 Score = 240 bits (614), Expect = 4e-62, Method: Composition-based stats. Identities = 71/320 (22%), Positives = 128/320 (40%), Gaps = 22/320 (6%) Query: 1 MKKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPL 60 M +I+ ++L+ L LQ++ + +++T+A +R +T SAVS +L KLR F+D L + Sbjct: 1 MS-NISDIELSQLRLLQIIFETKNLTQAGERAGLTQSAVSHTLKKLRHSFNDSLVIRQGN 59 Query: 61 GLSPTPLMVSMEQNLAEWMQMSNL--LLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQ 118 + TP S++ +L W+ L + F +A + I+ LS+ Sbjct: 60 KMVLTPRAESLQTSLGRWLNDFERNILFQEVFDPLTSDRTFYIATSDLVEHILAPHLSRH 119 Query: 119 IYQRYPQATIKLRNWDYDSLD-AITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFS 177 + P I R + +L I GEVD S ++ S + L+ Sbjct: 120 FGRIAPNIRIVFRKIEKRALASQIESGEVDFAIS----------VIDSTHPNLMVRTLYR 169 Query: 178 DVPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPE 237 D +R HP L+ F +YPH+ + +D+ L+ LG R + + Sbjct: 170 DDFVSVVRAGHPLLNSKIKAKDFCQYPHVLASTGNDNRGMVDDALEGLGLSRVMQYKVAN 229 Query: 238 FEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKR 297 F + ++ D +L A + + P+ + + WH + Sbjct: 230 FSSAPYIVESSDAILTA-PRTFVDLIAGKFNVSSFTPPVELE-------SYAMKMYWHIK 281 Query: 298 NSHNPKIVWLRETIKNLYAS 317 N + W RE I + A+ Sbjct: 282 NKDDQANRWFREQIAEITAA 301 >UniRef50_Q2S7V2 Transcriptional regulator n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2S7V2_HAHCH Length = 310 Score = 239 bits (610), Expect = 1e-61, Method: Composition-based stats. Identities = 81/318 (25%), Positives = 133/318 (41%), Gaps = 21/318 (6%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 I+ +DLNL + + E +T+A++ +++T AVS +L +LR D LF+ S G+ Sbjct: 1 MHISRIDLNLFVVFDAIYSEGGITRASEVLHLTQPAVSHALNRLRETLGDELFIRSSRGM 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQIY 120 +PTP + + + + L + P F L +++L AL K Sbjct: 61 TPTPYAHQLIGTVRQALNQLQRGLHQGQEFAPAQLETSFRLCVRDLFDVLLLPALIKNCR 120 Query: 121 QRYPQATIK-LRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 P+ LR+ L + G +D+ ++L S +I +E LF D Sbjct: 121 AIAPKVVFNCLRSPREQILHDLASGRIDLA----------ADVLISHDDSICHEKLFEDR 170 Query: 180 PCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFE 239 LR+DHPAL W+L LR+PH+ + + D L G +R + + P F Sbjct: 171 LTCLLRRDHPALASEWSLAEMLRWPHVQVSSREHGPGYEDIQLSRHGLQRKLGLRTPNFY 230 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 + AA D +L A + + Q L ++ PL + L WH+ Sbjct: 231 GAALTAANSDLILCA-PEQVARKLTQTIPLQVMPFPLTL-------NPLETYLYWHRSTD 282 Query: 300 HNPKIVWLRETIKNLYAS 317 P +WLRE + A Sbjct: 283 REPAHIWLREQTQRALAQ 300 >UniRef50_Q473Q1 Transcriptional regulator, LysR family n=9 Tax=Burkholderiaceae RepID=Q473Q1_RALEJ Length = 315 Score = 239 bits (610), Expect = 1e-61, Method: Composition-based stats. Identities = 72/321 (22%), Positives = 129/321 (40%), Gaps = 21/321 (6%) Query: 2 KKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLG 61 ++ +DLNL + + E S+T AA+++N+T AVS +L +LR FDDPLF G Sbjct: 3 AMQLSRIDLNLFVVFDAIYSEGSITAAARQLNLTQPAVSHALGRLRGLFDDPLFERRGQG 62 Query: 62 LSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQI 119 ++PTPL S+ + +Q L H P +F + L +L L ++ Sbjct: 63 MAPTPLARSLASEVRSALQSFARTLQDTPHFDPTNTVRRFTIGMRDALESTLLPPLMARV 122 Query: 120 YQRYPQATI-KLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSD 178 PQ I +R + + G +D + I + +D Sbjct: 123 TSVAPQVEIAAIRFDRREMESELLAGTIDAAIDILLPVSPA----------IHHAQFMAD 172 Query: 179 VPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEF 238 V R+DHP + + L+ +L H+ + + D L +G R + + + Sbjct: 173 PMIVLARRDHPLVKKELTLERYLAAEHVHVSSRRRGAGLEDQALHRMGLTRRVRLRCQHY 232 Query: 239 EQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRN 298 + + + D L RY + N+ + +++LP + L WH Sbjct: 233 AAACRVVSCTDLLA-TLPLRYARIANEPYANRILSLPFKVP-------SLELHLYWHAGG 284 Query: 299 SHNPKIVWLRETIKNLYASMA 319 ++ WLRE + + +S+ Sbjct: 285 ENDGANRWLREQLMAVMSSLG 305 >UniRef50_B0C5B7 Transcriptional regulator, LysR-family n=1 Tax=Acaryochloris marina MBIC11017 RepID=B0C5B7_ACAM1 Length = 300 Score = 239 bits (610), Expect = 1e-61, Method: Composition-based stats. Identities = 68/314 (21%), Positives = 129/314 (41%), Gaps = 20/314 (6%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 + DLNLL+ L +L++ERSV+K A+R+ ++ AVS +L +LR DP+ V L + Sbjct: 1 MDLRGFDLNLLVVLHILLKERSVSKTAERLQLSQPAVSAALNRLRTALKDPILVRDGLQM 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQT--PRGLKFELAAESPLMMIMLNALSKQIY 120 PTP + + + + L P F +A +++ L ++ Sbjct: 61 VPTPRAEQLVEPVQAIVSAIEQTLADPQPFDYSSISRTFRIATNDYGAFVLVPFLMNRMQ 120 Query: 121 QRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 + P T ++ + D A+ GE+D+ + + + + LFS+ Sbjct: 121 KIAPHLTFEIWDIALDVETALREGEIDLVIADAWTLRNCKC----------RKTLFSETF 170 Query: 181 CVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQ 240 +R++HP + +D +L+ H + T +D L + ++R + ++LP Sbjct: 171 TCLVRQNHPRVDTQLTMDDYLQEKHALVSARGRVTGNVDIALSQQNKQRQVQITLPHILA 230 Query: 241 SLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 M A D + + A R + + L P+ D + W R + Sbjct: 231 IPAMMAATDMI-VTVATRIANRFAVDYHLQTFPPPITLD-------GFDIAMAWPHRMDN 282 Query: 301 NPKIVWLRETIKNL 314 + I WLR + + Sbjct: 283 DTAIRWLRNELVAI 296 >UniRef50_Q0ARX0 Transcriptional regulator, LysR family n=1 Tax=Maricaulis maris MCS10 RepID=Q0ARX0_MARMM Length = 334 Score = 238 bits (609), Expect = 2e-61, Method: Composition-based stats. Identities = 65/316 (20%), Positives = 127/316 (40%), Gaps = 21/316 (6%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 S+ +DLNLL+ L ER+VT+AA+R+NV+ VS +L++LR F D LF+ +P G+ Sbjct: 4 MSLKHVDLNLLITFDALWHERNVTRAARRLNVSQPTVSNALSRLRLAFGDQLFLRAPRGI 63 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLD--KPHHQTPRGLKFELAAESPLMMIMLNALSKQIY 120 PT + +++ E ++ LD +F + + +L L + Sbjct: 64 EPTERCSEIIKDVREALRHIEQALDSGPAFDAKQCRREFHIGCADYFDLFVLPDLLAYMA 123 Query: 121 QRYPQATIKLRNWD-YDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 + P ++LR+ D + +D + GE+D + + + Sbjct: 124 EHAPMIDLRLRSVDIEEGMDLLDAGELDF----------MMHMEFPAAKRFGVRPVLHER 173 Query: 180 PCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFE 239 R HP + + ++ TF H++ +D VL LG R +A++ Sbjct: 174 HVFATRAGHPLVREAPDIATFASLSHVNFSQRGDSESPVDEVLARLGYRRRVAITTQHMT 233 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 + D + + R + + +P +++ P + W++R Sbjct: 234 TVAHLVKTTDLVA-SVPSRMAARMVEEGGFAVYPIPFQIEKA-------PVAVYWNRRFE 285 Query: 300 HNPKIVWLRETIKNLY 315 + + W+R+ I Sbjct: 286 LDGAMRWMRDAIIEFC 301 >UniRef50_A9W9P6 LysR substrate-binding n=3 Tax=Chloroflexus RepID=A9W9P6_CHLAA Length = 301 Score = 238 bits (609), Expect = 2e-61, Method: Composition-based stats. Identities = 49/313 (15%), Positives = 94/313 (30%), Gaps = 24/313 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L + + + VT+AA +++ A+SK +++L LF L T Sbjct: 1 MELRHLRYFEAVARHSHVTRAAAELHIAQPALSKQISQLERELGITLFDRVGRSLRLTEA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNALSKQIYQRYPQA 126 ++ + + + + A + +L L +QRYP Sbjct: 61 GEALLPYARAILAQVEEARAAMAERIGLKAGRVTIGAPPTVGAHLLPPLLTIFHQRYPGI 120 Query: 127 TIKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 T++L LD + G D+ + L ++ + + Sbjct: 121 TLRLHEAGIQSLLDLLEAGITDLAVVALPVTDEQ----------LTVTPLLNEPLVLIVS 170 Query: 186 KDHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 HP ++ + I A +E G + E E + Sbjct: 171 TTHPLARRSEVMMTELRHERWILSPSSYELREATLKACREAGFTPQTVLEGGETETLVRF 230 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 A L ++ P +V L + L L+W + +P Sbjct: 231 VAA--GLGVSLVPALAVAGCT----DVVRL-----TVSDQHLTRSLGLVWRSDRTASPAA 279 Query: 305 VWLRETIKNLYAS 317 LRE + N Sbjct: 280 RALREFLVNEVRQ 292 >UniRef50_Q46YJ7 Transcriptional regulator, LysR family n=5 Tax=cellular organisms RepID=Q46YJ7_RALEJ Length = 394 Score = 238 bits (608), Expect = 2e-61, Method: Composition-based stats. Identities = 73/318 (22%), Positives = 127/318 (39%), Gaps = 23/318 (7%) Query: 6 TTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPT 65 LD LL L L+ E+SVT+ A R+ + A+S +L +LR D + V G+ PT Sbjct: 84 DHLDTYLLRVLHTLLTEQSVTRTAVRLGQSQPAISNTLKRLREITGDAILVRGKSGMVPT 143 Query: 66 PLMVSMEQNLAEWMQMSNLLLDKPHHQTPR--GLKFELAAESPLMMIMLNALSKQIYQRY 123 + + + + + + P P F L A L L + +++ + Sbjct: 144 ERGRELLELAEQSLAAMDRIARPPQQFDPATTTRTFHLGAPDYLDAFFLPNIVERVRRLA 203 Query: 124 PQATIKLRNW--DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPC 181 P A + + D L+ + +G++DI S P + LF D Sbjct: 204 PGAKLFVHPMTSSSDFLEDLEQGQLDIVIGNWLSP----------PEHLHISPLFDDEVV 253 Query: 182 VWLRKDHPALHQTWNLDTFLRYPHISICW-EQSDTWALDNVLQELGRERTIAMSLPEFEQ 240 L HP + L +L PH++ +D L E G +R I ++LP F Sbjct: 254 CMLGAQHPLARKGLTLKHYLEMPHLAPAPYASMQRSMIDQALAEQGYKRNIQVTLPYFGL 313 Query: 241 SLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 ++ + D + T ++ +Y Q + +V P+ F + F LWH+R Sbjct: 314 VPYVLMKTDMV-FTTGRQFAAHYAQYLPIRMVPSPVTFPRMR-------FYQLWHERCHA 365 Query: 301 NPKIVWLRETIKNLYASM 318 P ++W+R I + + Sbjct: 366 APDVMWMRRMIAEVATDL 383 >UniRef50_B2JSH4 Transcriptional regulator, LysR family n=2 Tax=Burkholderiaceae RepID=B2JSH4_BURP8 Length = 309 Score = 237 bits (607), Expect = 3e-61, Method: Composition-based stats. Identities = 61/315 (19%), Positives = 114/315 (36%), Gaps = 20/315 (6%) Query: 4 SITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLS 63 + DLNLL L + + KAA+ + ++ A S +L +LR D LFV + G+ Sbjct: 7 HMDNFDLNLLRIFDALWRHGHLGKAAEELTLSQPAASYALKRLREELGDVLFVKTGSGMQ 66 Query: 64 PTPLMVSMEQNLAEWMQMSNL--LLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQ 121 PTP + + + + L F +A M+ L L +++ Sbjct: 67 PTPRAILLAPVVQSVLADIRERVLKAPNFVPDKAQRTFTIALSDVGEMVSLPRLLQRVTS 126 Query: 122 RYPQATIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 P + ++ L ++ R EVD+ + + L Sbjct: 127 LAPSVNVTTVSFAPKQLLSSLQRSEVDLAIGYFPDLDGV---------DVFQQHLVRHSF 177 Query: 181 CVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQ 240 +R++HPA+ F PH + E ++ L+E G R + P F Sbjct: 178 VCLVRQNHPAVQGRLTKKLFCELPHAVVQVEGRRQEIVEQFLKENGIRRREVLHTPHFLS 237 Query: 241 SLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 A D L++ + + + ++ +L ++ P K WH+ Sbjct: 238 IPMTIAMTD-LVVTVSSDVGEIFARIAELEILDPP-------YKMPRFDVNQYWHRSQHD 289 Query: 301 NPKIVWLRETIKNLY 315 +P W+R ++ L+ Sbjct: 290 DPGNRWMRGLVRELF 304 >UniRef50_C6IV95 LysR family transcriptional regulator n=4 Tax=Bacillales RepID=C6IV95_9BACL Length = 305 Score = 237 bits (606), Expect = 4e-61, Method: Composition-based stats. Identities = 48/312 (15%), Positives = 99/312 (31%), Gaps = 23/312 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L + ++ VT+AA+ ++V SAVS+ + +L LF+ L T + Sbjct: 1 MELRQLQYFVKVARKEHVTQAAEELHVAQSAVSRQIHQLEQELGVNLFMQKGRNLHLTAV 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQ-TPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + ++ + + + H P + L + L + M+ ++ + + YP Sbjct: 61 GQLFCSRVEMILKDLDRAVSEVHEFLDPEQGEIRLGFPNSLGIHMIPSVVAEFRKLYPNV 120 Query: 127 TIKLRNWD-YDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + R + + GEVD+ F + V+ ++ L Sbjct: 121 KFRFRQGTYPTLIRDVVSGEVDLAFISP---------FPENHDQVTGNVVLTEDLVAILP 171 Query: 186 KDHPALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 HP Q+ L I S + + E G IA E + + Sbjct: 172 PGHPLAGEQSIKLSQLKDEKFILFSKGYSLRPIVWHACLEAGFTPKIAFEGEETDTIRGL 231 Query: 245 AAQPDNLLLATAPRYCQ-YYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 A + ++ P L + + + K+ L+ Sbjct: 232 VAA--GMGVSLLPEMALFQSFTLQPIRVR--------ISEPKVTRTIGLIHRVDEKLPLV 281 Query: 304 IVWLRETIKNLY 315 R + + Sbjct: 282 AQSFRMFLLEYF 293 >UniRef50_B6R1K2 Transcriptional regulator, LysR family n=1 Tax=Pseudovibrio sp. JE062 RepID=B6R1K2_9RHOB Length = 293 Score = 237 bits (606), Expect = 4e-61, Method: Composition-based stats. Identities = 70/311 (22%), Positives = 129/311 (41%), Gaps = 21/311 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +DLNLLL + + ER++T+A+KR+N+T AVS +L +LR F DPLF+ + G+ PT L Sbjct: 1 MDLNLLLVFEAVYSERNLTRASKRLNLTQPAVSNALRRLRDTFQDPLFIRTADGMVPTDL 60 Query: 68 MVSMEQNLAEWMQMSNLLL-DKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + + ++M + F ++ M++L L K++ ++ P Sbjct: 61 AEQLAGRVLDALEMLRSFESRESFDPAGLSRDFRISISDYNGMLVLPRLLKELAEQAPGV 120 Query: 127 TIKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 +I + + ++ G+VD+ + ++ + YE L+SD Sbjct: 121 SITTSQIQRAHVSEHLSTGQVDLVLAPKQDVA-----------NLSYEPLYSDDYVGVAS 169 Query: 186 KDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMA 245 + +L+ + + H+ E +D L +LG++R + + + Sbjct: 170 AHYGPEGGQMSLEEYCQREHLLFSLEGYGRSTVDVALSKLGKKRKVVLRSSHVHTIPHVL 229 Query: 246 AQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIV 305 + Y + +L +LP L WH R H+P Sbjct: 230 EGSAFIA-TLPRLITLDYLKRFELTSFSLPFEL-------KGHEVGLHWHARQHHDPAHE 281 Query: 306 WLRETIKNLYA 316 WLR IK L+A Sbjct: 282 WLRGLIKELFA 292 >UniRef50_A0LD88 Transcriptional regulator, LysR family n=1 Tax=Magnetococcus sp. MC-1 RepID=A0LD88_MAGSM Length = 312 Score = 237 bits (606), Expect = 4e-61, Method: Composition-based stats. Identities = 68/312 (21%), Positives = 126/312 (40%), Gaps = 19/312 (6%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 + DLNLL+ LM ER VT+A +R+ +T +A+S +L +LR FDDPLF+ + + P Sbjct: 9 LNKFDLNLLVAFDALMSERGVTRAGRRLGITQAAMSNTLRRLRTAFDDPLFIKTGARMEP 68 Query: 65 TPLMVSMEQNLAEWMQMSNLLLD-KPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRY 123 TP + + + ++ ++ LD F + + ++ AL + + Sbjct: 69 TPRAMELSGMIEAALKQVHVALDNDSFDPANSHYVFRVGMVDYTVPLVFPALLDHLEKYA 128 Query: 124 PQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVW 183 P +++ N + + GEVD+ S L P + V+ Sbjct: 129 PNCILEVVNTGDFEGEMLESGEVDLVLSR----------LDQAPRGLKSRVVGEIPFVCI 178 Query: 184 LRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 R HP + + L+ +L+ H+ +D L+ + +ER + + L F Sbjct: 179 YRPGHPLIKEPMTLEQYLQARHVHYYPPMVKEGLVDLGLKAINQERNVVVRLDSFGMVPT 238 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 + A+ D + T L + LP + F ++WH R+ + Sbjct: 239 LVAETDLIAAVTH-TSAHVIAPAMGLKVQPLPFEAP-------PLQFVMVWHDRSEESAP 290 Query: 304 IVWLRETIKNLY 315 W RE + ++ Sbjct: 291 HQWFREQVLHML 302 >UniRef50_B5EGJ2 Transcriptional regulator, LysR family n=5 Tax=Geobacter RepID=B5EGJ2_GEOBB Length = 300 Score = 237 bits (606), Expect = 4e-61, Method: Composition-based stats. Identities = 44/313 (14%), Positives = 93/313 (29%), Gaps = 25/313 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +D+ L + + ++ TKAA+ +++ AVS ++ KL + LF +S T Sbjct: 1 MDVRQLRYFIEVAKVKNFTKAAEALHIAQPAVSMAVKKLEQELELSLFNRQDKKVSLTAE 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + + + L + + + + YPQ Sbjct: 61 GEIFLPHAKRILDDLRAAELEMAELKGLSKGEVRLGIPPMISAYFFPDIIRDFKKSYPQL 120 Query: 127 TIKLR-NWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + + + I +GE+D+G + P ++ + + + Sbjct: 121 HLSVLGEGAWRIQKMIGQGELDMGVVAG----------GNFPETLEVRRFLREEIVICVP 170 Query: 186 KDHPALHQ-TWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 DHP + + +L F+R P + VL+ G I F + Sbjct: 171 PDHPFAQRKSVSLVEFIREPLVFYKEGYYIREFFLEVLKGAGSAPNIVFETNLFSLVKSL 230 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 + + LVA+P + + W K + Sbjct: 231 VRNGTGISIFL------RMVVAADTDLVAVPFDPPL------HLDLLIAWKKDTYLSLAN 278 Query: 305 VWLRETIKNLYAS 317 + + A Sbjct: 279 RAFVDFLLQHAAE 291 >UniRef50_A8GKS5 Transcriptional regulator, LysR family n=1 Tax=Serratia proteamaculans 568 RepID=A8GKS5_SERP5 Length = 314 Score = 236 bits (604), Expect = 6e-61, Method: Composition-based stats. Identities = 71/318 (22%), Positives = 122/318 (38%), Gaps = 20/318 (6%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 ++ +DLNLL+ + ++RSV A + + ++ AVS +LA+LR FDDP+FV + Sbjct: 1 MNLKNVDLNLLVVFDAIFRQRSVGLAGQMLGISQPAVSHALARLRQLFDDPMFVRINNEM 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPR--GLKFELAAESPLMMIMLNALSKQIY 120 PT + ++ + M + +P P L L L + Sbjct: 61 RPTDRASELMPSVERVLSMIRDDVLQPVGFDPAANRRTLTLCMPDIGEQYFLPPLINHLA 120 Query: 121 QRYPQATIKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 Q P + L +A+ G VD+ R+ + LF Sbjct: 121 QVAPGMAVVSHELAPAQLEEALESGRVDLAIGYFPDLRRAV---------FYQQRLFYSG 171 Query: 180 PCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFE 239 C +R+ HP + +T +L FL+ H++ + ++E G R + + F Sbjct: 172 FCCAVRQGHPQIGKTLSLPQFLQAEHVTARLRIRSQEIAEQAMREQGIVRNVKLQTSHFL 231 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 + AQ D L T Q ++ + +P P + P WH+R Sbjct: 232 SLTQIIAQTDLLATVT-YEAAQLLQAAGKVHIYPVPFPIP-------QFPVMQYWHERAH 283 Query: 300 HNPKIVWLRETIKNLYAS 317 H+ WLR I+ L+ Sbjct: 284 HDRGNQWLRGEIRGLFQR 301 >UniRef50_D2P368 Transcription activator of glutamate synthase operon GltC n=18 Tax=Listeria RepID=D2P368_LISMO Length = 295 Score = 236 bits (603), Expect = 9e-61, Method: Composition-based stats. Identities = 48/312 (15%), Positives = 102/312 (32%), Gaps = 21/312 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L + + +TKA++ ++V SAVS+ + KL LF + T + Sbjct: 1 MELRQLKYFMEVARVEHMTKASENLHVAQSAVSRQITKLEEELGVHLFDRVGRNMQLTSV 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQ-TPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + A + P + + L +L ++ ++YPQ Sbjct: 61 GQDFLKQAAIALNELQKAEALVTEYTDPAKGTVRVGLPNSLSTKVLPSVISTFREKYPQI 120 Query: 127 TIKLRNWD-YDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 T + + + + G +D+ F + I+ F + + + Sbjct: 121 TYQFMEGTNEELTEMLLSGVLDMTFLSP---------VPESSEQIEAIRFFDEKLKLIVP 171 Query: 186 KDHPALHQ-TWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 K HP T +L + + + + G E IA +F + Sbjct: 172 KTHPLAENFTVSLKELASEKFVLYPEDFDLYKIVTKAANKKGFEPQIAFQSRDFYTIQGL 231 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 L ++ P + +AL + K+L ++ K+ + +P Sbjct: 232 V--GAGLGISILPEMILDGAIFKETKSIAL-------RDKELRRSVGIITTKKRNLSPSE 282 Query: 305 VWLRETIKNLYA 316 R I + ++ Sbjct: 283 NLFRSFIISFFS 294 >UniRef50_C6CYG5 Transcriptional regulator, LysR family n=2 Tax=Paenibacillus RepID=C6CYG5_PAESJ Length = 297 Score = 236 bits (603), Expect = 9e-61, Method: Composition-based stats. Identities = 43/314 (13%), Positives = 99/314 (31%), Gaps = 23/314 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L + + E++ ++AA+++++ ++S+ L+KL LF + + T Sbjct: 1 MELRQLQYVIQIAIEKNFSRAAEKLHIAQPSLSQQLSKLEQELGVLLFRRTTNSVELTQA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + L + + + +L + + YPQ Sbjct: 61 GQVFVDKSQSILDAIEQLKQEMDDMAQMKRGRLVVGTLPITGSHILPLVLPVFGELYPQI 120 Query: 127 TIKLRNWDYDSLDAI-TRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + L L+ + G DI S L + +++E L + C+ + Sbjct: 121 EVILVEDTTVKLEQLTANGGTDI----------SLLTLPLVDQTLEWEPLMEEEICLAVP 170 Query: 186 KDHPALHQT--WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 H +T +++ + + Q L ++ Q+ G I E Sbjct: 171 PSHRLAGRTDEISIEELREEHFVGLKKGQGFRQILVHLCQQAGFTPNIVFESSNIETVQS 230 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 + A + + P+ +P S + + + K + Sbjct: 231 LIAG--GMGITFVPKMLTRAAGGDF-------VPVYLSLKDRPSRTLIIASRKGRYLSKA 281 Query: 304 IVWLRETIKNLYAS 317 V ET+ + Sbjct: 282 AVAFIETMNKTISQ 295 >UniRef50_A9CLK9 Transcriptional regulator, LysR family n=2 Tax=Alphaproteobacteria RepID=A9CLK9_AGRT5 Length = 325 Score = 236 bits (603), Expect = 9e-61, Method: Composition-based stats. Identities = 82/317 (25%), Positives = 133/317 (41%), Gaps = 22/317 (6%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 ++ +DLNLL+ L ER+VT+A RI T A+S +L++LR D LFV P GL Sbjct: 8 MNLHGIDLNLLVAFDALNSERNVTRAGSRIGRTQPAMSAALSRLRFLLRDELFVRGPNGL 67 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGLK--FELAAESPLMMIMLNALSKQIY 120 PTP V + + ++ ++ L P F +A + ++L L + Sbjct: 68 QPTPRAVELAEPISLALREIQRTLQFTQGFDPDKSTISFSIAVSAHAGSVILPRLLSLLE 127 Query: 121 QRYPQATIKLRNWDY--DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSD 178 ++ P IK+R++ D++ + G VD+ + I LF + Sbjct: 128 EKAPGIDIKVRDYSSRDDAVSLLDSGGVDLTVGIPPTPTS----------RILSARLFQE 177 Query: 179 VPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEF 238 LRKDHP L + ++ +TFL HI + + D L R A+++P Sbjct: 178 RFVCILRKDHPILGRPFDPETFLSLTHILVAPDNEGLDVADAALASKNFRRRAAVTIPHM 237 Query: 239 EQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRN 298 + + A D + + +L + PLP VPF L WH+RN Sbjct: 238 HVAPALVASSDMVA-TVIESVVAHSGFAERLAVFDFPLPL-------NPVPFVLSWHRRN 289 Query: 299 SHNPKIVWLRETIKNLY 315 +P WLR + + Sbjct: 290 DGHPAQQWLRNGLLAAF 306 >UniRef50_Q15UP0 Transcriptional regulator, LysR family n=4 Tax=Alteromonadales RepID=Q15UP0_PSEA6 Length = 305 Score = 235 bits (602), Expect = 1e-60, Method: Composition-based stats. Identities = 75/319 (23%), Positives = 132/319 (41%), Gaps = 24/319 (7%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 ++ +DLNL + S+TKAA + +T AVS SLA+LR +DPLFV + + Sbjct: 1 MNLNRIDLNLFAVFDAIYTAGSLTKAADVLCITQPAVSNSLARLREMLNDPLFVRTGHSM 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFE--LAAESPLMMIMLNALSKQIY 120 +PTP ++ E + + + + H P + AA L ++ L+ Q+ Sbjct: 61 TPTPAAQNIIGPAREALGLLRKSVQESHTFDPATAEISYNFAARDLLEASIMPRLTAQLQ 120 Query: 121 QRYPQATIKLRNWD-YDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 P T+ + + + A+ G +D + + + + + + D Sbjct: 121 NVAPNITLTNYDISRSNIVSAMASGSLDF---------YADASSAFVDPHLCKQKIAEDR 171 Query: 180 PCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFE 239 V R++HPAL Q NLDTFL+ HI+I ++ +D L +L +R + M F Sbjct: 172 FVVIARRNHPALSQGLNLDTFLQLGHINISQRRTGAGPIDVALDKLNLKRRVVMRGQHFL 231 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 + + D + + + + + LP V + L WH Sbjct: 232 TVPAVIVKTDLIACVP-----YHLAKHYDCSIYELPFEL-------APVEYFLYWHVSAD 279 Query: 300 HNPKIVWLRETIKNLYASM 318 H+ +WLRE I + + Sbjct: 280 HDHAHMWLREQIAEVVTTF 298 >UniRef50_P20668 HTH-type transcriptional regulator gltC n=17 Tax=Bacillales RepID=GLTC_BACSU Length = 300 Score = 235 bits (602), Expect = 1e-60, Method: Composition-based stats. Identities = 42/314 (13%), Positives = 108/314 (34%), Gaps = 21/314 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L + + V++AA ++V SA+S+ +A L + LF + TP+ Sbjct: 1 MELRQLRYFMEVAEREHVSEAADHLHVAQSAISRQIANLEEELNVTLFEREGRNIKLTPI 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHH-QTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 ++ M+ + ++ P ++ + L +L + + YP Sbjct: 61 GKEFLIHVKTAMKAIDYAKEQIDEYLDPHRGTVKIGFPTSLASQLLPTVISAFKEEYPHV 120 Query: 127 TIKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 LR Y ++A+ ++D+ G + + I ++LF++ + Sbjct: 121 EFLLRQGSYKFLIEAVRNRDIDLALLGP---------VPTNFSDITGKILFTEKIYALVP 171 Query: 186 KDHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 +HP +T +L + + ++ G ++ + + + Sbjct: 172 LNHPLAKQKTVHLIDLRNDQFVLFPEGFVLREMAIDTCKQAGFAPLVSTEGEDLDAIKGL 231 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 + + + P + + V +P+ F + + ++ K P Sbjct: 232 VSA--GMGVTLLPES--TFAETTPRFTVKIPIEFPQVK-----RTVGIIKPKNRELAPSA 282 Query: 305 VWLRETIKNLYASM 318 E + ++ + Sbjct: 283 NDFYEFVIQFFSKL 296 >UniRef50_C4KB22 Transcriptional regulator, LysR family n=37 Tax=Betaproteobacteria RepID=C4KB22_THASP Length = 333 Score = 235 bits (601), Expect = 2e-60, Method: Composition-based stats. Identities = 64/320 (20%), Positives = 120/320 (37%), Gaps = 23/320 (7%) Query: 2 KKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLG 61 + S+ DLNLL L + + SV++AA+ + ++ VS +L +LR +PLF+ + G Sbjct: 21 RMSLRDFDLNLLRVLLAVYEAGSVSRAAEHLGLSQPTVSSALGRLRRALGEPLFIKTASG 80 Query: 62 LSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPR--GLKFELAAESPLMMIMLNALSKQI 119 ++PT ++ + + P +A ++ L + + Sbjct: 81 VTPTARTHALASSARAMLARLETDFFVADRFDPAKYEGNLTVALSDVGELVFLPRILDSV 140 Query: 120 YQRYPQATIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSD 178 + P A + + + A+ GEVD+ + E L Sbjct: 141 RRLAPLAMLDSVTLAPGELMRAMEDGEVDLAIGYYPDLDAA---------GFYREKLLDH 191 Query: 179 VPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEF 238 LR DHP + +L+ FL H ++ + + L+ L +R I + P F Sbjct: 192 RFVCLLRADHPVQDRQLSLERFLSLEHAAVRAKGRSQEIFEKYLERLRIQRRIVLRTPHF 251 Query: 239 EQSLFMAAQPDNLLLATAPRYCQYYNQLHQ--LPLVALPLPFDESQQKKLEVPFTLLWHK 296 + + D L+ T P +Y + + PL + WH+ Sbjct: 252 MSLPGIIGRSD--LVVTLPHAIGHYFTRVGEKVRMAEPPLAIP-------HIELYQHWHR 302 Query: 297 RNSHNPKIVWLRETIKNLYA 316 H+P+ WLR + L++ Sbjct: 303 GFHHDPRNRWLRTLVAGLFS 322 >UniRef50_C0Z518 Transcriptional regulator n=3 Tax=Paenibacillaceae RepID=C0Z518_BREBN Length = 295 Score = 235 bits (601), Expect = 2e-60, Method: Composition-based stats. Identities = 55/314 (17%), Positives = 97/314 (30%), Gaps = 21/314 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L + + + S T+AA+ + V+ + KL + PLF L T Sbjct: 1 MELVYLHTFREVARYGSFTRAAEELGYAQPTVTAQMQKLEQSYGAPLFERYGRKLRLTQA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQAT 127 ++ E +++ + H + L L + Q+YPQ Sbjct: 61 GEALLPYARELIRLYGESKEVIKH--QTTGPIAIGTIDTLAAFFLPPYLQAFCQQYPQVD 118 Query: 128 IKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRK 186 + LR + + I G +D G + V+ + V + Sbjct: 119 LVLRTAGEAEIVQQIRDGYLDFGIIFDR---------PCTDPELVTHVIREEELVVVMPP 169 Query: 187 DHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMA 245 H T + P + + L E G + IA E Sbjct: 170 AHRFTTATALTVHDLGGEPLVLTEEGCTYRGMLLEAFGEAGMTQRIACQFSNPEAIKQCV 229 Query: 246 AQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIV 305 L +A P + L A+P Q K L++HK+ +P +V Sbjct: 230 RC--GLGVALLPVMAVQRELAEGV-LTAIPF-----QSDKPPFSIQLVYHKKKWLSPSMV 281 Query: 306 WLRETIKNLYASMA 319 L +TI + Sbjct: 282 TLVDTITRSQREES 295 >UniRef50_Q04778 HTH-type transcriptional regulator alsR n=87 Tax=Bacillus RepID=ALSR_BACSU Length = 302 Score = 235 bits (600), Expect = 2e-60, Method: Composition-based stats. Identities = 43/306 (14%), Positives = 99/306 (32%), Gaps = 26/306 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L + +E KAA+R+N+T +S+ + +L L + + T Sbjct: 1 MELRHLQYFIAVAEELHFGKAARRLNMTQPPLSQQIKQLEEEVGVTLLKRTKRFVELTAA 60 Query: 68 MVSMEQNLAEWMQMSNLLLD-KPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + ++ + L + ++ +++P Sbjct: 61 GEIFLNHCRMALMQIGQGIELAQRTARGEQGLLVIGFVGSATYEFLPPIVREYRKKFPSV 120 Query: 127 TIKLRN-WDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 I+LR + + +G +DIG A+ E S + L Sbjct: 121 KIELREISSSRQQEELLKGNIDIGI----------LHPPLQHTALHIETAQSSPCVLALP 170 Query: 186 KDHPA-LHQTWNLDTFLRYPHISI--CWEQSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 K HP ++ ++ P I++ + ++ G I E++ + Sbjct: 171 KQHPLTSKESITIEDLRDEPIITVAKEAWPTLYMDFIQFCEQAGFRPNIVQEATEYQMVI 230 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 + + + + P + L L + + + Q +L + + + K N + P Sbjct: 231 GLVSA--GIGMTFVPSSAK--------KLFNLDVTYRKMDQIQLNAEWVIAYRKDNHN-P 279 Query: 303 KIVWLR 308 I Sbjct: 280 LIKHFI 285 >UniRef50_P10183 HTH-type transcriptional activator nahR n=67 Tax=Bacteria RepID=NAHR_PSEPU Length = 300 Score = 234 bits (599), Expect = 3e-60, Method: Composition-based stats. Identities = 71/316 (22%), Positives = 121/316 (38%), Gaps = 21/316 (6%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 + LDLNLL+ L+ +R V+ A+ + +T AVS +L +LR DPLFV + G+ Sbjct: 1 MELRDLDLNLLVVFNQLLVDRRVSITAENLGLTQPAVSNALKRLRTSLQDPLFVRTHQGM 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQIY 120 PTP + + + M L P F LA + + L + Sbjct: 61 EPTPYAAHLAEPVTSAMHALRNALQHHESFDPLTSERTFTLAMTDIGEIYFMPRLMDVLA 120 Query: 121 QRYPQATIK-LRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 + P I +R+ + A+ G VD+ LL +L L + Sbjct: 121 HQAPNCVISTVRDSSMSLMQALQNGTVDLAVG----------LLPNLQTGFFQRRLLQNH 170 Query: 180 PCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFE 239 RKDHP + L+ F Y H+ + + +D + +G R I + +P F Sbjct: 171 YVCLCRKDHPVTREPLTLERFCSYGHVRVIAAGTGHGEVDTYMTRVGIRRDIRLEVPHFA 230 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 + + D L R + L + P+ E+ + WH + Sbjct: 231 AVGHILQRTDLLA-TVPIRLADCCVEPFGLSALPHPVVLP-------EIAINMFWHAKYH 282 Query: 300 HNPKIVWLRETIKNLY 315 + +WLR+ + +L+ Sbjct: 283 KDLANIWLRQLMFDLF 298 >UniRef50_B0BQD1 HTH-type transcriptional activator n=15 Tax=Proteobacteria RepID=B0BQD1_ACTPJ Length = 299 Score = 234 bits (598), Expect = 3e-60, Method: Composition-based stats. Identities = 74/316 (23%), Positives = 128/316 (40%), Gaps = 24/316 (7%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 + I T+DLNLL L+QER+VTKAA+R++VT A+S L +LR F DPLFV G+ Sbjct: 2 RDIRTVDLNLLKAFDALLQERNVTKAAQRLSVTQPAMSAMLNRLRDSFGDPLFVRVQHGI 61 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKP-HHQTPRGLKFELAAESPLMMIMLNALSKQIYQ 121 PT +++ ++ + N +L + ++A+ + + + Q Sbjct: 62 EPTARALALMPSVKTVLAEVNRMLRPVEFDPQTAEMTIKIASTDYGLEAIGTPFLSHLKQ 121 Query: 122 RYPQATIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 P+ + D L + +DI + +P + + L ++ Sbjct: 122 LAPKIRVAFLPAQDVDLLAQFEQARIDIALVSTQH----------IPADLHSKPLLTEHY 171 Query: 181 CVWLRKDHPALHQTWNLDTFLRYPHISICW-EQSDTWALDNVLQELGRERTIAMSLPEFE 239 +R DHP +Q NLD F + + D L +LG+ R +++S+ F Sbjct: 172 VCVMRADHPMANQLLNLDNFCELDFAMMSYDGGQFYGVCDEALAKLGKTRRVSVSVNHFS 231 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 + D ++A P ++ L L LPL + WH+R Sbjct: 232 LLPNILRTTD--VVALIPSRLSHH--LTGLICKTLPLEV-------QGFSLQMAWHERTH 280 Query: 300 HNPKIVWLRETIKNLY 315 +P W+R + Sbjct: 281 QDPAYQWIRNLLVESL 296 >UniRef50_A1U1I0 Transcriptional regulator, LysR family n=67 Tax=Proteobacteria RepID=A1U1I0_MARAV Length = 336 Score = 234 bits (598), Expect = 3e-60, Method: Composition-based stats. Identities = 70/324 (21%), Positives = 133/324 (41%), Gaps = 34/324 (10%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 I+ +DLNLL+ L +L++ER+VTKAA + +T A+S L +LR F DPL V + G+ Sbjct: 1 MDISRVDLNLLVYLDVLLRERNVTKAANHLGITQPAMSNGLRRLRDLFGDPLLVRTSEGM 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDK--PHHQTPRGLKFELAAESPLMMIMLNALSKQIY 120 + T ++ + + + + P F + A ++ + ++I Sbjct: 61 TATERARELQPLVRGILSDIEQAVQEKTPFAAGESQRVFRIMASDYAESCLMPRVLRRIR 120 Query: 121 QRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 Q P T+ + S + +G +D+ + + +P + + L+++ Sbjct: 121 QEAPHVTLDVLTPSDVSFLDVEQGRLDMAINRFD----------KIPQSFHQKTLWTEYF 170 Query: 181 CVWLRKDHPALHQTWNLDTFLRYPHISICWEQSD------------TWALDNVLQELGRE 228 + +P L + + LDT+L HI + +D L +GR+ Sbjct: 171 ACLMNARNPILKEPFTLDTYLDASHIWVSKTGFGVGVGVNPKDVQRLGWVDEALGRMGRK 230 Query: 229 RTIAMSLPEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQ-LPLVALPLPFDESQQKKLE 287 R I++ ++ ++ +A Q D L+AT P + + + L + P Sbjct: 231 RQISVFTRHYQVAMLLAEQHD--LIATLPSRAAWLQKDNPNLVVKVPPFEIP-------P 281 Query: 288 VPFTLLWHKRNSHNPKIVWLRETI 311 + W HN WLR+ I Sbjct: 282 FELKMAWSPLLQHNSDHQWLRKLI 305 >UniRef50_A6EYC4 LysR family regulatory protein n=1 Tax=Marinobacter algicola DG893 RepID=A6EYC4_9ALTE Length = 300 Score = 234 bits (598), Expect = 4e-60, Method: Composition-based stats. Identities = 69/319 (21%), Positives = 133/319 (41%), Gaps = 21/319 (6%) Query: 1 MKKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPL 60 MK ++ ++DLNLL +M+ +++AA + ++ A+S +L +LR DPLFV + Sbjct: 1 MKLNLRSVDLNLLPVFDAIMEAGQLSRAADSLGMSQPAISAALQRLRHTLGDPLFVRTHQ 60 Query: 61 GLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTP--RGLKFELAAESPLMMIMLNALSKQ 118 G+ PTP + ++L++ + LD + P +F + + M++L L + Sbjct: 61 GMVPTPRARELHRSLSQQLGAMRDTLDPANRFVPGTSQRRFRVLSNDYFEMVVLPTLLTR 120 Query: 119 IYQRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSD 178 + P +++ D + E D+ + ++ + +VL ++ Sbjct: 121 LRSEAPNVVVEVALAGDDMPQRLYTAEADLAV----------DAFATENDRLRRQVLLAE 170 Query: 179 VPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEF 238 V RKDHP L + FL H+ + LD +L E G +R + +F Sbjct: 171 RLAVVARKDHPDLWDDCSKQQFLDAEHVVLPDRNR-RLPLDQILNEPGWQRRTGARVTQF 229 Query: 239 EQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRN 298 L ++ D + R Q Y + L + P+ +P LLW Sbjct: 230 ASMLATCSRSDMIA-TVPERLAQQYARAFGLKTLPFPVEVP-------PLPVYLLWAPVM 281 Query: 299 SHNPKIVWLRETIKNLYAS 317 ++P +W R+ + ++ Sbjct: 282 DNDPAHIWFRQRLMESVST 300 >UniRef50_Q1GMN1 Transcriptional regulator, LysR family n=1 Tax=Ruegeria sp. TM1040 RepID=Q1GMN1_SILST Length = 319 Score = 234 bits (598), Expect = 4e-60, Method: Composition-based stats. Identities = 69/325 (21%), Positives = 125/325 (38%), Gaps = 27/325 (8%) Query: 1 MK-KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSP 59 M K++ +DLNLL L ERSVTKAA + ++ AVS +L +LR DD LF+ S Sbjct: 7 MHQKNLNAIDLNLLKVFSALAAERSVTKAANSVGLSQPAVSHALRRLRDLMDDELFIRST 66 Query: 60 LGLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPR--GLKFELAAESPLMMIMLNALSK 117 G+ PT + + ++M + P + L +++ L+ Sbjct: 67 DGMQPTERCRELAPAIDASLKMLQDAMTVKDDNDPANLRATYRLGMNDLFSTLLVPGLTA 126 Query: 118 QIYQRYPQATIKLRNWDY------DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAID 171 ++ ++ P +++ + D+ + RG +D+ P D Sbjct: 127 RVAKQAPNVSLRFLHSMAINQNVDDAYSDLERGRIDLTVIQD----------FDTPSRFD 176 Query: 172 YEVLFSDVPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTI 231 E+L + R HP +++ + HI ++ +D L ++G R I Sbjct: 177 RELLGASEFVCVARAGHPVFQPGLSMEQYTSLGHIMFTTLDAEYSRIDEALSKMGIRRRI 236 Query: 232 AMSLPEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFT 291 + +P + +L A D L+ Q+ Q L + LP Sbjct: 237 ELRVPHYSAALSATALTD-LVYTVPRILAQHAEQAFGLQVSELPFEAPV-------RKIF 288 Query: 292 LLWHKRNSHNPKIVWLRETIKNLYA 316 +WHK + + WLR + ++ Sbjct: 289 QVWHKTRTKDFGHQWLRNVVSDVSQ 313 >UniRef50_C6J455 LysR family transcriptional regulator n=2 Tax=Bacillales RepID=C6J455_9BACL Length = 307 Score = 234 bits (597), Expect = 4e-60, Method: Composition-based stats. Identities = 47/317 (14%), Positives = 100/317 (31%), Gaps = 24/317 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L LL + +E++ ++AA ++++ ++S+ L+KL LF + + T Sbjct: 1 MELRQLLYTLKIAEEKNFSRAADKLHIAQPSLSQQLSKLEQELGVKLFQRNTSTVELTYA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNALSKQIYQRYPQA 126 S + + M L + + + + + +L + YP Sbjct: 61 GASFIAHAQKIMDAVAQLRQEMDDISQLRAGRVVVGSMPITGSHLLPYVLPAFKASYPNI 120 Query: 127 TIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRK 186 + L +L+ + + S L L + YE + ++ + + Sbjct: 121 QVTLLEDTSLNLEKL---------TAEGGTDLSLLSLPLLEPTLSYEPIGEEIIDLAVPP 171 Query: 187 DHPALHQT------WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQ 240 DHP + P I + Q ++ +E G E + E Sbjct: 172 DHPLTKTPGVLEQGVEMKQLENEPFIVLKKGQGFRKMTADLCREAGFEPNVVFESNNIET 231 Query: 241 SLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 + A + + PR+ + +L LPL + + K Sbjct: 232 VQSLVAA--GMGITLVPRFIAR-AKRSELIPAYLPLAAPAP-----SRTLVIAYRKGRYL 283 Query: 301 NPKIVWLRETIKNLYAS 317 + ET K Sbjct: 284 SKAAEAFIETFKKTMEE 300 >UniRef50_B8K739 Transcriptional regulator, substrate-binding of LysR family protein n=1 Tax=Vibrio parahaemolyticus 16 RepID=B8K739_VIBPA Length = 297 Score = 234 bits (597), Expect = 4e-60, Method: Composition-based stats. Identities = 43/313 (13%), Positives = 90/313 (28%), Gaps = 25/313 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +DL L L + + TKAA ++ + SA+S S+ KL L + +S T Sbjct: 1 MDLKRLHYFNQLAKTGNFTKAADQLGIAQSALSTSIKKLEQQLGLKLVNRTERQMSLTAE 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + ++ ++ + + A + L L +Q + YP Sbjct: 61 GQVLLRHAKIILEDVEQAEKELQELKGLTSGVIKFGAPAMLASYFLPDALEQFKKAYPGI 120 Query: 127 TIKLRN-WDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 I + + GE+D+ + I +L D + Sbjct: 121 QINIHEAGTATLAQMLVNGELDLALIRGDRE----------HEQIRQSLLAQDQIAACVP 170 Query: 186 KDHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 HP ++ LD F + P + +++ Q+ + E M Sbjct: 171 ISHPFAKRSAITLDEFCQQPLVLFKNGYFLRETVNSYCQQNKLTPQVHFETNLPELLKSM 230 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 + + L A+P + + + W + + Sbjct: 231 VRRQVGIGTCLPILVA------DDPELKAIPFDPP------IPLQLGIGWKSSHYLSTAA 278 Query: 305 VWLRETIKNLYAS 317 + ++ Sbjct: 279 KAFVDFLQGTLKQ 291 >UniRef50_UPI00016C47B2 transcriptional regulator, LysR family protein n=1 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C47B2 Length = 291 Score = 234 bits (597), Expect = 4e-60, Method: Composition-based stats. Identities = 46/311 (14%), Positives = 93/311 (29%), Gaps = 25/311 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLR---AWFDDPLFVNSPLGLSP 64 ++L+ L + + S T+AA+R +VT +S+ + +L LF + Sbjct: 1 MELHQLRYFVAVAETGSFTRAAEREDVTQPTLSEQIMRLESKPHGVGRRLFDRLGRKVVL 60 Query: 65 TPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYP 124 T + + + + A + +L + + +P Sbjct: 61 TDAGRELLGHAQGILAAVKEAERAVRDSAEG-GSLRVGAIPTIAPFLLPGTVTRFRKDHP 119 Query: 125 QATIKL-RNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVW 183 ++L + L + GE+D+ + E LF++ + Sbjct: 120 NVQLQLKEDLTERLLADLLAGELDVALMAMPVR----------DDRLHVEKLFAEPLVMA 169 Query: 184 LRKDHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 L H +T L L P I + + ++ G E + + L Sbjct: 170 LPAKHELASKTEVKLADVLEEPFILLDDMHCFGDQVLSLCHRGGLEPRVVCRGEQIVTLL 229 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 M A ++ P + Q L + +WHK+ P Sbjct: 230 AMVAA--GQGVSIVPEMAATADTSKQCAYRPL-------GKPTPVRTLCAVWHKQRFRPP 280 Query: 303 KIVWLRETIKN 313 + L + K Sbjct: 281 SLRALVDMAKR 291 >UniRef50_P37499 Uncharacterized HTH-type transcriptional regulator yybE n=4 Tax=Bacillales RepID=YYBE_BACSU Length = 292 Score = 234 bits (597), Expect = 5e-60, Method: Composition-based stats. Identities = 53/313 (16%), Positives = 109/313 (34%), Gaps = 24/313 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++ L Q L + + VTKAAK +++T A+S+S+A+L PLF +S Sbjct: 1 MEWEQLEYFQTLARMQHVTKAAKSLSITQPALSRSIARLENHLGVPLFDRQGRSISLNQY 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHH-QTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + M+ ++ P L L ++ L Q YP Sbjct: 61 GHIFLRRVQAMMKEYTEGKEEIQALLKPDQGVVSLGFLHTLGTTLVPDLIGSFQQEYPNI 120 Query: 127 TIKL-RNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + +L +N Y L+ + G++D+ I + L+S+ V++ Sbjct: 121 SFQLKQNHSYWLLERLKSGDLDLCLLASIKPENP----------IQWIKLWSEELFVFVP 170 Query: 186 KDHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 DHP ++ L+ I + + +D + ++ + I E + Sbjct: 171 NDHPLASRESITLNEIAGERFILLKKGYALRMTVDELFEKANIQPNIMFEGEEATTAAGF 230 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 A L ++ P L L + + + + W K +P Sbjct: 231 VAA--GLGISILP-------DLKGLD--QSKITKIRVSWPECQRVIGIAWIKGRFLSPVA 279 Query: 305 VWLRETIKNLYAS 317 ++ + + ++ Sbjct: 280 ETFKQYVISHFSE 292 >UniRef50_Q3AG49 Transcriptional regulator, LysR family n=1 Tax=Carboxydothermus hydrogenoformans Z-2901 RepID=Q3AG49_CARHZ Length = 297 Score = 233 bits (596), Expect = 6e-60, Method: Composition-based stats. Identities = 46/315 (14%), Positives = 106/315 (33%), Gaps = 24/315 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++ N L +++ +++S ++AA+ ++++ A+S + L ++ L + ++ TP Sbjct: 1 MNRNQLEIFRVVAEKKSFSEAARLLHISQPAISMHIQALEEYYGTKLLDRTTKRVTLTPA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTP-RGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + + + + K L A + +L L Y++YP Sbjct: 61 GEILYKYTLHLLSLMDKAQRDISQAAGIIKGKLILGASLTIGGHVLPPLLSSFYRKYPDV 120 Query: 127 TIKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 I + + + L+ ++ +D+GF E + E L D V + Sbjct: 121 NITMEIMNTEKVLERVSDLTLDLGFVEGEVTTG----------ELHVEALARDELVVVVA 170 Query: 186 KDHPALHQ-TWNLDTFLRYPHISICWEQSDTWALDNVLQELGR---ERTIAMSLPEFEQS 241 +HP + + + P + ++ LQ G E I M L E Sbjct: 171 ANHPLAGRGRISWEELATLPLVMREPGSGTRKVIEERLQAAGFKLPELKIVMELGSTEAI 230 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 L A ++ + + + F ++ + H+ Sbjct: 231 KGAVEA--GLGAAILSKWTVRREINWGI------FKQLLIENLPIYREFYVVLNNNKFHS 282 Query: 302 PKIVWLRETIKNLYA 316 P L + + + Sbjct: 283 PATQALIQFCREHLS 297 >UniRef50_B1J7P4 Transcriptional regulator, LysR family n=5 Tax=Pseudomonas RepID=B1J7P4_PSEPW Length = 314 Score = 233 bits (595), Expect = 7e-60, Method: Composition-based stats. Identities = 73/319 (22%), Positives = 128/319 (40%), Gaps = 20/319 (6%) Query: 1 MKKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPL 60 M + +L L L L L+Q ++++ AA+R+ V+ SA+S+ LA LR FDDPL V Sbjct: 1 MNPTFASLSLAHLRTLDCLLQLKNLSHAAERLGVSQSALSRQLAHLREAFDDPLLVRQGR 60 Query: 61 GLSPTPLMVSMEQNLAEWMQMSNLLLD-KPHHQTPRGLKFELAAESPLMMIMLNALSKQI 119 G + ++ + L + ++ L +F LAA + ML L + Sbjct: 61 GYVLSEYGQALVEPLRQVLEELQALRQPAAFDPARCERRFCLAASDYVAEHMLPLLVAAL 120 Query: 120 YQRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 Q P +I R W + GE+D+ L P + +L D Sbjct: 121 EQEAPGVSIDYRTWQAGQYALLASGEIDLA----------TTLFDESPANLHGRLLGEDR 170 Query: 180 PCVWLRKDHPA-LHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEF 238 +R+DHP + + D +L + H+ I +D L+ G +R I++ +P F Sbjct: 171 AVCLMRRDHPLTACEVLSQDDYLAFKHVRISGGGDKDSFIDRHLRTQGLQRRISLEVPFF 230 Query: 239 EQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRN 298 ++ + L + +LH L L + + ++WH+R Sbjct: 231 SATVQVVGNSQALA-TVPEHIARQLCRLHGLAWRPLGFVEHTQR-------YWVVWHQRL 282 Query: 299 SHNPKIVWLRETIKNLYAS 317 + + WLR + L+ Sbjct: 283 QASAEHRWLRNRVFELWRQ 301 >UniRef50_B7VQ45 Transcriptional regulator n=8 Tax=Vibrionales RepID=B7VQ45_VIBSL Length = 311 Score = 233 bits (595), Expect = 7e-60, Method: Composition-based stats. Identities = 94/315 (29%), Positives = 138/315 (43%), Gaps = 9/315 (2%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 KS+ D+NLLLCL +L++ERSV+K A+R+ ++ SAVSK L KLRA FDDPLF GL Sbjct: 5 KSLLKCDMNLLLCLHVLIEERSVSKTAERLFLSQSAVSKQLTKLRALFDDPLFERESKGL 64 Query: 63 SPTPLMVSMEQNLAEWMQMSNLL-LDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQ 121 PTP +++ + + + L + + F + + Sbjct: 65 FPTPKALALAPKIHQILLQIEKLTVPEVFDPKDSERTFTIDLVETAYTAIYPHFMPTALA 124 Query: 122 RYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPC 181 P TI W DS + + EVD G E R+ + +P +DY L D Sbjct: 125 DAPHITINSSTWSSDSFKRLLKREVDFGIGIFELDERASTHVQCIPDELDYVELCLDYSV 184 Query: 182 VWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQS 241 +R DHPAL + WNL TFL+Y HI + + W L VL E A ++ + + Sbjct: 185 CLMRNDHPALQEEWNLGTFLKYRHIQLVTGGAGDWLLMEVLNSKQLEINKAANVSDITSA 244 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 + + Q D L+ + Y +L + +P+ LLWHK Sbjct: 245 IKLCKQSDLLM-CYPYNSVRDYIDSGELVMKPVPVDLVPGG-------LFLLWHKYFDSE 296 Query: 302 PKIVWLRETIKNLYA 316 P WLR+ I Sbjct: 297 PSHKWLRDLIIEQTR 311 >UniRef50_A4YPA1 Putative transcriptional regulator, LysR family n=1 Tax=Bradyrhizobium sp. ORS278 RepID=A4YPA1_BRASO Length = 310 Score = 232 bits (594), Expect = 1e-59, Method: Composition-based stats. Identities = 74/318 (23%), Positives = 129/318 (40%), Gaps = 21/318 (6%) Query: 4 SITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLS 63 + +DLNLL+ + LMQ RSV++ A+R+ + + S +L +LRA DPLFV +P G+ Sbjct: 8 DLRDVDLNLLVAFEALMQTRSVSRMAQRLRIGQPSASHALKRLRALLGDPLFVRTPAGMI 67 Query: 64 PTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPR--GLKFELAAESPLMMIMLNALSKQIYQ 121 PTP +++ + + + L PR F + A + ++ + L + Sbjct: 68 PTPHALALAEPIRAILTSIERTLFARASFDPRAERRVFRIGAMDYVQAVIADPLLAVLQA 127 Query: 122 RYPQATIKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 + P + L D D+ ++ RGE+D+ E+L+ + Sbjct: 128 QAPGCKLILTTTDCDTAGRSLARGEIDLAIGAFPQIKAGS----------HQELLYRERY 177 Query: 181 CVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQ 240 L + +L PH+ + + LD+VL+ G +R +A+S P F Sbjct: 178 ECVFDAKACRLGKRVTRAQWLALPHVIMSVHGDYSGPLDDVLKSSGEQREVAVSTPNFLA 237 Query: 241 SLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 F+ L+ A R + + L LP T++WH R Sbjct: 238 IPFLLRN-KRLIAALPSRMARAFCGRLGLSTCPLPFTAPT-------FDVTMIWHARTGD 289 Query: 301 NPKIVWLRETIKNLYASM 318 P WLR+ I + + Sbjct: 290 EPGAAWLRDQITAICRRI 307 >UniRef50_A5W6Q9 Transcriptional regulator, LysR family n=12 Tax=Pseudomonas RepID=A5W6Q9_PSEP1 Length = 326 Score = 232 bits (593), Expect = 1e-59, Method: Composition-based stats. Identities = 75/317 (23%), Positives = 133/317 (41%), Gaps = 24/317 (7%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 +I+ DLNLL +L++E++V++AA+R+ +T VS +LA+LR DPL V + Sbjct: 26 MNISNFDLNLLRVFDMLLREQNVSRAAERLALTQPTVSNALARLRDQLGDPLLVRVGRRM 85 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQIY 120 PTP +++E + +Q L P+ + +A + + + L ++ Sbjct: 86 RPTPRALALEGPIRAALQQIEQTLGTGDGFEPQRSHRQLRIALTDFVEQLCMPPLLARLE 145 Query: 121 QRYPQATIKLRNWDYDS-LDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 P I + + + +A+ RG++D+ + +P + Sbjct: 146 LLAPNVRIDVVHLAPNLPAEALDRGDLDLVLGRFDE----------VPARFTRHPWRRET 195 Query: 180 PCVWLRKDHPAL--HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPE 237 + LR+ HP L Q +LD FL HI + +D L E G R IA + P Sbjct: 196 LQIALRQQHPHLVPGQALDLDAFLGLRHIWV-HGGQTRGMVDQWLAEQGLTRQIAYTTPN 254 Query: 238 FEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKR 297 + Q+ +AA D + + + Q + L L + LP + ++ Sbjct: 255 YLQAAHLAAATD-MCVVLPRQLAQQFAHLLPLAVYELPFALE-------PFELEVVHLSH 306 Query: 298 NSHNPKIVWLRETIKNL 314 H+P + WL E I L Sbjct: 307 RQHDPALAWLVEQILTL 323 >UniRef50_UPI00016945AE hypothetical protein Plarl_07755 n=1 Tax=Paenibacillus larvae subsp. larvae BRL-230010 RepID=UPI00016945AE Length = 303 Score = 232 bits (593), Expect = 1e-59, Method: Composition-based stats. Identities = 43/314 (13%), Positives = 99/314 (31%), Gaps = 22/314 (7%) Query: 6 TTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPT 65 + LD+ L +++ +S TKAA +++T +SK + + L S + T Sbjct: 5 SELDIRHLKYFIEVVRCKSFTKAADVLHITQPTISKMIKNIEDELGVVLLDRSTKQVMLT 64 Query: 66 PLMVSMEQNLAEWMQMSNLL-LDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYP 124 S+ + ++ L ++ + + K + + + + + +YP Sbjct: 65 DAGQSILLQAQQIVKSFENLSIELANTIHLKKGKIRMGLPPMVGSRFFPHIIGEFHHKYP 124 Query: 125 QATIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVW 183 I+L + + G +DIG + + + + V Sbjct: 125 NIEIQLIEEGAKKVEEQVEEGHLDIGVVLLPIPSGTFDSFPFVH----------EKLMVV 174 Query: 184 LRKDHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 + H QT L P I + G + + +++ Sbjct: 175 VYPKHRLAGQTVIALKKLEHEPFILFREGFVLHDRIPEECIRAGFQPKVVYESSQWDFIS 234 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 M A L ++ P +L+ ++ +PL ++ ++W K + Sbjct: 235 EMVAA--GLGISMLPESICR--ELNPNRVITIPLVEP-----SIDWSLAMIWPKEQYISY 285 Query: 303 KIVWLRETIKNLYA 316 + +K Sbjct: 286 AVREWINFVKQRLQ 299 >UniRef50_A9AQZ4 Transcriptional regulator, LysR family n=24 Tax=Burkholderiaceae RepID=A9AQZ4_BURM1 Length = 327 Score = 232 bits (593), Expect = 1e-59, Method: Composition-based stats. Identities = 67/316 (21%), Positives = 123/316 (38%), Gaps = 20/316 (6%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 + LDLNL+ L L R+V++A + + V+ VS +L +LRA+F DPLFV + G+ P Sbjct: 20 MDALDLNLIPYLVALDDTRNVSRAGELLGVSQPRVSTALGRLRAYFGDPLFVRTSRGMEP 79 Query: 65 TPLMVSMEQNLAEWMQMSNLLLDKPHHQTPR--GLKFELAAESPLMMIMLNALSKQIYQR 122 TP +++ + + L PH P F +A ++ L L + Q Sbjct: 80 TPRALALLPAARDALAQIERGLVAPHDFDPAASTHTFSIALSDVGEIVFLPKLLQAFAQC 139 Query: 123 YPQATIKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPC 181 P A ++ + +D + + G +D+ + LF+ Sbjct: 140 APHANLRSVSLPHDEVGRGLEAGSIDLAVGYFPDLDG---------NNFFQQRLFTHRFV 190 Query: 182 VWLRKDHPA-LHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQ 240 +R+ HP + + ++ FL H + E L+ L + +R + P F Sbjct: 191 CLMRRGHPLEQARPFTVEQFLESGHAVVRAEGRSQEVLEKYLAKQRMQRRAVLETPHFMS 250 Query: 241 SLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 F+ ++ D + Y H + E WH++ + Sbjct: 251 LPFILSRTDLIA-TVPHAIGYAYAAEHAF------IVPVEPPLPLPRFDLKQHWHRKFHN 303 Query: 301 NPKIVWLRETIKNLYA 316 +P+ WLR + +L+ Sbjct: 304 DPRTAWLRGVVASLFN 319 >UniRef50_Q13JD9 Transcriptional regulator, LysR family n=1 Tax=Burkholderia xenovorans LB400 RepID=Q13JD9_BURXL Length = 305 Score = 232 bits (593), Expect = 1e-59, Method: Composition-based stats. Identities = 64/316 (20%), Positives = 120/316 (37%), Gaps = 22/316 (6%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 + DLNL+ + + SV+ AA+R+N+T VS +L++LR DPLF + G+ Sbjct: 6 MQTASTDLNLIRAFVAIYETGSVSAAARRLNLTQPTVSYALSRLRTLLHDPLFSRTREGM 65 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPH--HQTPRGLKFELAAESPLMMIMLNALSKQIY 120 +PT + + + + + F +A + L + +++ Sbjct: 66 APTFNASQLYETFRQALDRIEGAIAATRYFDAATSTRCFRIALSDLGELYFLPRMVERLQ 125 Query: 121 QRYPQATIKLRNWD-YDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 + P +++ D + + + G++D LFS+ Sbjct: 126 RTAPGVELEVVQLDVERTAEWLNTGQIDAAVGNLHLVGGKA----------RRRYLFSET 175 Query: 180 PCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFE 239 + HP + T +L ++R H+ + S +++V+ +G R IA+ +P F Sbjct: 176 YSCLVSHRHPWIGTTLSLGDYVRAKHV-VGASSSGHRLVEDVMTGMGLSRKIALRVPHFT 234 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 + + A D L+L R Y + + LP+P D L W R + Sbjct: 235 NVVDVVAGSD-LVLTLPARVANVYQSTGTVRALPLPVPVD-------PFDVNLYWQDRAT 286 Query: 300 HNPKIVWLRETIKNLY 315 WL E I Sbjct: 287 DLSAQKWLCEIIAETL 302 >UniRef50_Q65GU9 Transcriptional regulator YbbE n=2 Tax=Bacillus subtilis group RepID=Q65GU9_BACLD Length = 299 Score = 232 bits (592), Expect = 2e-59, Method: Composition-based stats. Identities = 48/313 (15%), Positives = 103/313 (32%), Gaps = 24/313 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L + + + + TKAA ++ A+S+S+ KL PLF+ + T Sbjct: 1 MELYQIDHFIAVSRHKHFTKAALEQRISQPALSRSIKKLEEELGVPLFIRKTKSIRLTKY 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHH-QTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + + + P + ++ L ++ L + ++YP Sbjct: 61 GEQFLIKAKQARLALDEGVQQIRESVNPNAGEISVSFLHTLGSRLMPQLIAEFKKKYPNV 120 Query: 127 TIKL-RNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 +L + + + GE DI S +++ VL ++ + L Sbjct: 121 AFRLYQAANEHLQHMVETGEADICLSSPPLPNE----------HLEWTVLDTEPLYLVLP 170 Query: 186 KDHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 DHP + + + + + D + + L +A E L + Sbjct: 171 ADHPLADRKEVAIRSIAHEDFVCFKPGYGLRYVFDQMCRGLSISPKLAFEGEEVSTILGL 230 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 + L +A P+ ++ V P+ F + E L K + +P Sbjct: 231 VSA--GLGVAILPKTAEH---------VHSPVAFCRVSDYRSERTIGLAVLKDHYLSPAA 279 Query: 305 VWLRETIKNLYAS 317 +E + Y Sbjct: 280 RNFKEFVIEYYRR 292 >UniRef50_A8V9B9 LysR-like regulatory protein n=2 Tax=Betaproteobacteria RepID=A8V9B9_9BURK Length = 308 Score = 231 bits (591), Expect = 2e-59, Method: Composition-based stats. Identities = 58/313 (18%), Positives = 120/313 (38%), Gaps = 20/313 (6%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 + +D+ LL + SVT+AA+ + ++ +S +L+KLR + DPLFV + G+ Sbjct: 1 MIEIDVKLLNVFAETYRTSSVTQAAENLGLSQPTISFNLSKLRDHYKDPLFVRTSRGMEA 60 Query: 65 TPLMVSMEQNLAEWMQMSNLLLDKPHHQTP--RGLKFELAAESPLMMIMLNALSKQIYQR 122 TP + + + + + + + P F +A +++L L ++ Sbjct: 61 TPFAQELYEQVVDLLASFSNIARLQTSFDPSEAQRIFRIAMTDISQIVLLPTLLNKLRIV 120 Query: 123 YPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCV 182 P+A +++ + ++ + GEV++ + L + LF V Sbjct: 121 APRAQLRISHITTETPRMLESGEVELAVGF----------MPQLDAGFYQQKLFPQRFVV 170 Query: 183 WLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 H AL + +L+ +L H+++ + +D L+E R + + +P + Sbjct: 171 LAASRHVALGDSMSLEYYLSAGHVTVTPSGTGHSIIDRTLREQQLHRHVVLDVPNYLAIA 230 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 + AQ D L + + +P + WH R + Sbjct: 231 DIVAQTDLLA-TVPQKLADLMSSSVDARRYPVPFEIP-------QYDVKQHWHARTHQDA 282 Query: 303 KIVWLRETIKNLY 315 WLR + L+ Sbjct: 283 GHRWLRALLAELF 295 >UniRef50_B9JIM7 Transcriptional regulator protein n=12 Tax=Proteobacteria RepID=B9JIM7_AGRRK Length = 306 Score = 231 bits (591), Expect = 2e-59, Method: Composition-based stats. Identities = 50/315 (15%), Positives = 108/315 (34%), Gaps = 25/315 (7%) Query: 1 MKKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPL 60 M + LD L Q +++ S +AA+ ++++ A+++ + KL PL + Sbjct: 1 MSINCEILD---LRAFQAVVELESFHRAAEALHISQPALTRRIQKLEQSIGAPLLDRTTR 57 Query: 61 GLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQ-TPRGLKFELAAESPLMMIMLNALSKQI 119 ++PT M + ++ + L + R +A L + + Sbjct: 58 HVAPTATGQEMIPLVRRMLEEFDGSLFAIKDSGSQRRGLITMACVPTAAFYFLPTVIRTF 117 Query: 120 YQRYPQATIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSD 178 + YP +++R+ + L A+ RGEV+ G L+ + + +E L D Sbjct: 118 GRDYPHIRLRIRDLTANEGLQAVARGEVEFGI----------NLMGNSDPDLSFEPLIDD 167 Query: 179 VPCVWLRKDHPALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPE 237 + +RKDHP + + +P + + + LD L + Sbjct: 168 PFVLAMRKDHPLAAFDEIHWNQLEGHPLVVVDRSSGNRTLLDAALARANLRLNWFYEVTH 227 Query: 238 FEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKR 297 SL + L ++ PR + L + ++ + Sbjct: 228 LNTSLGLVEA--GLGISVLPRLATPQEEHPFLVTRP-------IVNPVVTRTIGIVRRRS 278 Query: 298 NSHNPKIVWLRETIK 312 + +P + + Sbjct: 279 ATLSPAADRFIDMLL 293 >UniRef50_Q0BPL7 Transcriptional regulators, LysR family n=1 Tax=Granulibacter bethesdensis CGDNIH1 RepID=Q0BPL7_GRABC Length = 308 Score = 231 bits (590), Expect = 3e-59, Method: Composition-based stats. Identities = 76/320 (23%), Positives = 124/320 (38%), Gaps = 21/320 (6%) Query: 2 KKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLG 61 ++++ LDLNLL + ERSVTKAA+ I V SA+S +LA+LR D LFV +P G Sbjct: 5 HRNLSRLDLNLLTAFDAIYTERSVTKAAECIGVGQSAMSHNLARLREALQDELFVRTPSG 64 Query: 62 LSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQI 119 + PTP ++ + + L TP + + + +++ L + Sbjct: 65 MEPTPRARAIADTVRNLLWTVQDKLLTTRSFTPATAERIWRIGLADNIESLLMPPLLDMM 124 Query: 120 YQRYPQATIK-LRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSD 178 + P I+ + L+A+ R E+D+G + + P D Sbjct: 125 LKEAPGMRIQAIFTDGLRVLEALDRDELDMGIGVFRHGGNVHKRRNFAP----------D 174 Query: 179 VPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEF 238 L LD + PH+ + D+ L LGR RTI M+ P F Sbjct: 175 SYLCLYDPKQITLEGPITLDQYASLPHVLVSLRGIFHGVADDALSLLGRTRTIVMTTPHF 234 Query: 239 EQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRN 298 + + ++ + H L + LP ++LWH Sbjct: 235 LSVPY-VLRGAPVITTLPGTLARSAASAHGLCVSPLPFEL-------APFRLSMLWHSSY 286 Query: 299 SHNPKIVWLRETIKNLYASM 318 ++P WLR T+ +L M Sbjct: 287 DNDPAHRWLRNTVASLMDQM 306 >UniRef50_A9FW21 Transcriptional regulator, LysR family n=2 Tax=Myxococcales RepID=A9FW21_SORC5 Length = 333 Score = 231 bits (590), Expect = 3e-59, Method: Composition-based stats. Identities = 82/312 (26%), Positives = 133/312 (42%), Gaps = 18/312 (5%) Query: 4 SITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLS 63 I +++LNLL L+ L+ E SV+ AA+R +V+ SA+S SLA+LR F DPL V GL+ Sbjct: 21 DIRSINLNLLPALEALLVEGSVSGAARRAHVSQSAMSHSLARLRELFGDPLLVPLGRGLT 80 Query: 64 PTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQIYQ 121 PTP + + L + L P PR F +A + L + + + Sbjct: 81 PTPRALQLRAALPAAFEHLRRALASPEPFDPRTSARTFRVATIDYFELTTLPDVLDHLGE 140 Query: 122 RYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPC 181 P +++ + D A+ G++D+ + L+ D Sbjct: 141 HAPFVRLEIERFSPDVTPALVLGDIDLAL--------FGASQPVPAAGLRRAPLYQDPFA 192 Query: 182 VWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQS 241 V RK HPA+ + +LDT++ H+ + E A+D L LG+ R +A+ LP F + Sbjct: 193 VMARKGHPAIKRRLDLDTYVALGHVLVSVEGHRGGAVDRALARLGKTRRVALRLPHFMSA 252 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 D LL Q +L L + A P +Q +W +R+ + Sbjct: 253 PLAVRSSD-LLCTIPSSVAQRARELFGLRVFAPPFELPAAQ-------VVAVWSQRHDDD 304 Query: 302 PKIVWLRETIKN 313 P W R+ + Sbjct: 305 PAQRWFRDLFFS 316 >UniRef50_A3I8L6 Transcriptional regulator, LysR family protein n=1 Tax=Bacillus sp. B14905 RepID=A3I8L6_9BACI Length = 292 Score = 230 bits (589), Expect = 3e-59, Method: Composition-based stats. Identities = 35/312 (11%), Positives = 88/312 (28%), Gaps = 22/312 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +++ L + +E TKAA+++ ++ +S+ + L PLF + T Sbjct: 1 MEIRHLHYFMAVCEELHFTKAAEKLGISQPTLSQQIRVLEDELGMPLFDRIGKKIVVTEA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + + + + + + L +Q++P+ Sbjct: 61 GALLFTYATAMLNTLQNVKGAIKDLQEVQGGQIRVGIMPSDLDYRITQLVIDFHQKFPRV 120 Query: 127 TIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRK 186 + + D + + EVDIG + L + V + K Sbjct: 121 KLTIL-ASIDIMRQVLENEVDIGIGTNVEP----------HDRLVIIPLRKEEYVVTVSK 169 Query: 187 DHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMA 245 +HP + + P + ++ +++ G + + + + Sbjct: 170 EHPWAHREAVTIAELKDLPLVMYPEGFLGREIVEETVKKHGFQLHTILETSSVTSIMNLV 229 Query: 246 AQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIV 305 N+ P L ++ L ++++ + Sbjct: 230 RA--NIGATVQPYPLIQQMNDSDLRIIRL-------TDTIPSRSLSIIYRVDRYVSHATT 280 Query: 306 WLRETIKNLYAS 317 E IK Sbjct: 281 AFIEQIKAYLKE 292 >UniRef50_A9GLW1 Transcriptional regulator, LysR family n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9GLW1_SORC5 Length = 315 Score = 230 bits (589), Expect = 3e-59, Method: Composition-based stats. Identities = 73/297 (24%), Positives = 127/297 (42%), Gaps = 20/297 (6%) Query: 22 ERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSMEQNLAEWMQM 81 E SVT+AA R+ ++ SA+S +L +LR DDP+ V +P G+ PTP + + E + Sbjct: 35 EGSVTRAAARVGLSQSAMSHALGRLRVLIDDPVLVRTPRGMIPTPRAQELIGPIREALAK 94 Query: 82 SNL--LLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQATIKLRNWDYDSLD 139 F +A + +I+L L +++ P + R +D + Sbjct: 95 IEATVARSPRFEPATARRSFTVATVDYVELILLPRLVQKLVSEAPFIDLVARPYDSEMWS 154 Query: 140 AITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPALHQTWNLDT 199 A+ G+VD+ LL +LP + L + +R+ HPA+ L T Sbjct: 155 AMETGKVDLAIG----------LLPALPAGFYRQRLIEERYMCVVRRSHPAVRGKLTLKT 204 Query: 200 FLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQPDNLLLATAPRY 259 + PH I +D VL E G R +A+ +P F + + AQ D L+L R Sbjct: 205 YTSLPHALISPRGEGGGRVDEVLAERGLSRRVALQIPHFLVAAHIVAQTD-LVLTVPARI 263 Query: 260 CQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWLRETIKNLYA 316 + + ++ +L ++ P+ +WH+R++ +P WLR + Sbjct: 264 ARVFAEMEELHVMKPPVEL-------GGFSVDQVWHERHAKDPAHTWLRGVFAEIAR 313 >UniRef50_B7WQP0 Transcriptional regulator, LysR family n=1 Tax=Comamonas testosteroni KF-1 RepID=B7WQP0_COMTE Length = 295 Score = 230 bits (589), Expect = 3e-59, Method: Composition-based stats. Identities = 67/313 (21%), Positives = 126/313 (40%), Gaps = 20/313 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +D+ LL + + RSV++A + + + ++VS +L +LR F+D LFV + G+ PTP Sbjct: 1 MDMKLLSVFDEIYKTRSVSRAGENLGLAQTSVSLALGRLRRAFNDQLFVRTSEGMLPTPR 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPR--GLKFELAAESPLMMIMLNALSKQIYQRYPQ 125 ++ L + +++ + P F LA + L AL ++ P+ Sbjct: 61 AAALVPQLRQALELLQSATRQQAEFDPASSSRAFRLAMTDISHLEFLPALMNKLGNIAPK 120 Query: 126 ATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 +++ D+ + G+ D+ + L + LF D +R Sbjct: 121 VRVEVLRITADTARLLEAGDADLAIGY----------MPELDAGFYQQKLFRDGFACVVR 170 Query: 186 KDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMA 245 + HP + + F H+ I + ++ L+ G +R +A+SLP + Sbjct: 171 RTHPRIDDNLTMTRFKTERHVIITAPGTGNEIVEQELKRQGAQRNVALSLPTLPGVGNLL 230 Query: 246 AQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIV 305 A D + R Q ++ Q+ +A P E WH+R +P Sbjct: 231 AHTDLIA-TVPHRIAQTLVKIAQVKAIASPYRLP-------EFAIKQHWHERYQQDPANR 282 Query: 306 WLRETIKNLYASM 318 WLR T+ L+ + Sbjct: 283 WLRSTLAELFLEI 295 >UniRef50_A5V8P8 Transcriptional regulator, LysR family n=1 Tax=Sphingomonas wittichii RW1 RepID=A5V8P8_SPHWW Length = 316 Score = 230 bits (589), Expect = 3e-59, Method: Composition-based stats. Identities = 78/321 (24%), Positives = 134/321 (41%), Gaps = 14/321 (4%) Query: 1 MKKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPL 60 M S+T DLNLL+ L L+ E+SVT+AA+R+ VT AVS SLA+LR F+DPL V Sbjct: 1 MALSLTQFDLNLLVVLDALLTEKSVTRAAERLFVTQPAVSGSLARLRDIFEDPLLVRVGR 60 Query: 61 GLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGL--KFELAAESPLMMIMLNALSKQ 118 + T ++ + E + M L P +F +A M +L + ++ Sbjct: 61 EMELTVRARALAGPVREALLMVKAALGSEESFDPAETKCEFRIAMTDYCSMTILPRIVRE 120 Query: 119 IYQRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSD 178 + R P + + S D + GE+D + R+ + S P + F D Sbjct: 121 LSARAPGIELAVEGLVNKSFDRLETGEIDFLLT---VVERTLLMHSRHPDMLRGADAFED 177 Query: 179 VPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEF 238 + DHP + F YP+ ++ + ++ + G +++ A+ P F Sbjct: 178 CYTCVVAADHPF-DGALTPEDFRAYPNATVSFGENTFTTDRAAYEHGGLDQSPALIAPSF 236 Query: 239 EQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRN 298 LF + R + + + + L+ P+ ++ L WH R+ Sbjct: 237 SSLLFQLQGTTLIG-TVPNRLAEMFAPMLGVRLLEPPIRLPTLTER-------LNWHVRS 288 Query: 299 SHNPKIVWLRETIKNLYASMA 319 +P W+R I ++ SM Sbjct: 289 DADPGHSWMRNLILDVGRSMG 309 >UniRef50_B7IPY3 Transcriptional regulator, LysR family n=74 Tax=Bacillales RepID=B7IPY3_BACC2 Length = 300 Score = 230 bits (589), Expect = 3e-59, Method: Composition-based stats. Identities = 46/317 (14%), Positives = 98/317 (30%), Gaps = 31/317 (9%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L Q + + +TKAA+ +++ ++SK++A+L PLF ++ Sbjct: 1 MELLQLKYFQTVARLEHMTKAAEELHIAQPSLSKTIARLEKDLGVPLFDRQGRQITLNSF 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + + + +A + +L L + +P Sbjct: 61 GKVFLKRVERIFHELSEGEREIKDLAELQQGSITMAVS---IPRILPELLGSFLREHPNV 117 Query: 127 TI-KLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + + E+D S I +E L ++ + + Sbjct: 118 RFQQFLASTPSMKRQLENMEIDFCLSSVPVEGE----------EIVWEPLITEEIFLVVP 167 Query: 186 KDHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 H ++ +L P IS+ D +E G IA + E + Sbjct: 168 SGHRLSNRESIHLHEVKDEPFISMNTGYGFRHLTDEFCKEAGFTPHIAFEVDEPTVISDL 227 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQ---LPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 Q L +A P N L ++ + L W K+ + Sbjct: 228 IKQ--GLGIAFVPNLTLLKNSTLAANKLRIIEP----------ACKRTIGLSWSKKRYLS 275 Query: 302 PKIVWLRETIKNLYASM 318 RE + + ++++ Sbjct: 276 KTAQQFREFVIDYFSNI 292 >UniRef50_C5CVL6 Transcriptional regulator, LysR family n=5 Tax=cellular organisms RepID=C5CVL6_VARPS Length = 327 Score = 230 bits (589), Expect = 4e-59, Method: Composition-based stats. Identities = 84/325 (25%), Positives = 140/325 (43%), Gaps = 25/325 (7%) Query: 1 MKKS--ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNS 58 M+ +DL+L+ L ++ +RSV++AA R+ + AVS +L +LR DPL V S Sbjct: 1 MRDQALFDKIDLHLIRVLHTVLTDRSVSRAAIRLGMYQPAVSAALKRLRELSGDPLLVRS 60 Query: 59 PLGLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTP--RGLKFELAAESPLMMIMLNALS 116 G+ PT + M + A ++ + +L P F +AA + + L L Sbjct: 61 GSGMVPTDAGLRMIEPAASILRAAEMLFSDARGFEPQSAATTFRIAASDYMDPLFLPMLV 120 Query: 117 KQIYQRYPQATIKLRNWDYDS--LDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEV 174 + + P I++ DS + G+VD+ P + Sbjct: 121 AHVKREAPLCQIEIHALTPDSDYHGHLALGQVDLVIGNWLKP----------PEDLHMAR 170 Query: 175 LFSDVPCVWLRKDHPALHQTWNLDTFLRYPHISICW-EQSDTWALDNVLQELGRERTIAM 233 LF D + +DHPA+ + W+L+T+L HI+ +D +L ELGR+R I Sbjct: 171 LFGDEVVSLVNQDHPAVRRGWDLETWLAAEHIAPTPMHPGGRGIIDQMLDELGRQRNITA 230 Query: 234 SLPEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLL 293 F M A L+L T +YC+ + + ++ P+ + L Sbjct: 231 RCAHFSLIPDMVASSL-LVLTTGRQYCERFAARLPVKILECPVALPRLM-------YYQL 282 Query: 294 WHKRNSHNPKIVWLRETIKNLYASM 318 WH+R + WLRE IK++ AS+ Sbjct: 283 WHERTHSSSSARWLRECIKDVAASL 307 >UniRef50_Q391Q9 Transcriptional regulator, LysR family n=1 Tax=Burkholderia sp. 383 RepID=Q391Q9_BURS3 Length = 322 Score = 230 bits (589), Expect = 4e-59, Method: Composition-based stats. Identities = 72/321 (22%), Positives = 126/321 (39%), Gaps = 17/321 (5%) Query: 1 MKKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPL 60 MK LDLNLL LM E +VT+AA+R+ ++ SAVS +L +LR D LF + Sbjct: 1 MKDVFRQLDLNLLRVFAALMAEGNVTRAAERLALSQSAVSNALRRLRESLGDVLFEKTVS 60 Query: 61 GLSPTPLMVSMEQNLAEWMQMSNLLLD-KPHHQTPRGLKFELAAESPLMMIMLNALSKQI 119 G+ PT + + + F +A + ++ L+ + Sbjct: 61 GVRPTARARELWSAVQPHFDALKQAISPDQFDPQEHRGTFTIAMSDYSVERIMPRLAHFM 120 Query: 120 YQRYPQATIKLRNWD-YDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSD 178 + P I+L + D RG VD+ G + + ++ Sbjct: 121 GEHAPSMRIELTPFSVADLPAMFDRGGVDLAIGGYLNDSS-------PSSGVRTHEMWPI 173 Query: 179 VPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEF 238 +RKDHP L FL H+ + + D++L G +R + ++L + Sbjct: 174 HWSCLMRKDHPLAKGPLTLKRFLAARHLDVGFSGMRVPVYDSLLSAHGLQRNLVLTLNAY 233 Query: 239 EQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRN 298 +L + + D + + L L + L + + P+ ++WH+R Sbjct: 234 SPALAIIRESDFIGVLP--------TTLLDLSIHEKELVSRQPPVRMPARPYCVIWHQRW 285 Query: 299 SHNPKIVWLRETIKNLYASMA 319 +P WLR+TI +L+ A Sbjct: 286 DSHPAHRWLRQTIVSLFTRPA 306 >UniRef50_A1U2R6 Transcriptional regulator, LysR family n=3 Tax=Marinobacter RepID=A1U2R6_MARAV Length = 300 Score = 230 bits (588), Expect = 4e-59, Method: Composition-based stats. Identities = 74/315 (23%), Positives = 128/315 (40%), Gaps = 22/315 (6%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 ++ DLNLL + +E S+T+AAK +++T A+S SLA+LR F+DPLF + Sbjct: 1 MALNRPDLNLLHVFDTIYREGSLTRAAKALHLTQPAISHSLARLRDHFNDPLFTRQGNQM 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGL--KFELAAESPLMMIMLNALSKQIY 120 PTPL +++ + +++ H P + L L L L ++ Sbjct: 61 VPTPLARRFLESMRPGLNQIQSAVNQFHAFDPASQRKTYALGLRDVLESTFLPQLISKL- 119 Query: 121 QRYPQATIKLRNWDYDSLD-AITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 YP ++ + ++ + G++D +E+L D Sbjct: 120 APYPDMEVQSQRVARRDMETQLAAGKLDFAIDVLLPVSNQT----------SHELLRQDR 169 Query: 180 PCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFE 239 V RK HP + Q ++ ++L HI + D L G +RTI + + Sbjct: 170 LVVLARKGHPVIAQGLDMASYLEARHILVSSRAEGPGIEDFELSRHGAQRTIRLRCQHYY 229 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 + + D LLL Y + Q + ++A P+ + L WHK Sbjct: 230 AACRVVESSD-LLLTMPETYARIIAQNTDIEVLAPPVEMP-------SIDVHLYWHKAYE 281 Query: 300 HNPKIVWLRETIKNL 314 P +VW R+ ++NL Sbjct: 282 QEPALVWFRDLLRNL 296 >UniRef50_Q30XG7 Conserved hypothetical transcriptional regulator, LysR family n=1 Tax=Desulfovibrio desulfuricans subsp. desulfuricans str. G20 RepID=Q30XG7_DESDG Length = 309 Score = 230 bits (588), Expect = 5e-59, Method: Composition-based stats. Identities = 80/322 (24%), Positives = 136/322 (42%), Gaps = 25/322 (7%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 I++++LNLL+ L+ L+ E +VT+AA+R+++T S +SK+LA+LR FDDPL V S L Sbjct: 1 MDISSVNLNLLVALKALLDEGNVTRAAERLHITQSGMSKNLAQLRELFDDPLLVRSGNAL 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPH-HQTPRGLKFELAAESPLMMIMLNALSKQIYQ 121 T +E L + + L + F LA + +L I Sbjct: 61 VLTERARELEGPLEMVLGNVHALFEAQRFDPATCRRSFTLAVTDYVAQYILPDALGAILA 120 Query: 122 RYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPC 181 P I+ W+ DS+ A+ G++D+ L +P +++ + D Sbjct: 121 AAPGIDIQAIGWEPDSMRALAEGKIDMA----------TCLTEGVPASVEQLRVGEDRFA 170 Query: 182 VWLRKDHPA-LHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQ 240 +R HP LD +++ H +I +D VL +LG R I + +P + Sbjct: 171 CLMRAGHPLAAAGAMRLDRYVQADHAAITIGGDKVRIIDRVLGKLGHSRNIRLRVPFYAS 230 Query: 241 SLFMAAQPDNLLLATAPRYC-----QYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWH 295 ++ + ++ D LLL L LP D ++++WH Sbjct: 231 AVEIVSRTD-LLLTLPAHVARNVIQARNPSEPALAWAPLPFAVD-------SFEYSIIWH 282 Query: 296 KRNSHNPKIVWLRETIKNLYAS 317 R +P W+RE + S Sbjct: 283 ARFHGDPGHRWVREMLFAQMQS 304 >UniRef50_B8KMT5 Transcriptional regulator, LysR family n=1 Tax=gamma proteobacterium NOR5-3 RepID=B8KMT5_9GAMM Length = 300 Score = 230 bits (587), Expect = 6e-59, Method: Composition-based stats. Identities = 49/308 (15%), Positives = 108/308 (35%), Gaps = 22/308 (7%) Query: 10 LNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMV 69 +N ++ + + S +AA R++++ A+S ++ L LF + ++ TP Sbjct: 5 INQVMAFSAVARTGSFAEAALRLHLSQPALSIAIKNLEEALGGKLFARTTRSVTLTPEGK 64 Query: 70 SMEQNLAEWMQMSNLLLDKPH-HQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQATI 128 + + L H + R K ++AA + +L + +++YP + Sbjct: 65 AFYPVARRLLSDWEQSLQDVRNHFSLRRGKLDIAAMPTYTINLLPKILASFHRQYPNINV 124 Query: 129 KLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKD 187 + + ++ + ++G + + ++ LF D K Sbjct: 125 TVHDVIAESVVEMVREHRCELGVTFDPDDSP----------DLTFQPLFIDRFIAIFPKQ 174 Query: 188 HPALHQ-TWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAA 246 HP L + + L YPHIS+ +D L + G T A + M Sbjct: 175 HPLLGKGSLRWRDLLDYPHISLQKPAGTRARIDQTLAKKGLRITPAFESHQLVSIGRMVR 234 Query: 247 QPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVW 306 + L L+ P + + L A+ P Q ++ ++ + + Sbjct: 235 E--GLGLSVVPSTSRAQMKEMGLECRAIAFPVITHQ-------LGVITRRQQTLSVAAQA 285 Query: 307 LRETIKNL 314 + I+ + Sbjct: 286 MASLIREM 293 >UniRef50_A5F4D9 Transcriptional regulator, LysR family n=68 Tax=Gammaproteobacteria RepID=A5F4D9_VIBC3 Length = 327 Score = 230 bits (587), Expect = 6e-59, Method: Composition-based stats. Identities = 94/309 (30%), Positives = 159/309 (51%), Gaps = 9/309 (2%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 + +DLNLL+CL++L++E SVT+AA R+ ++ SAVSKSLAKLR FDDPLFV + GL+ Sbjct: 20 LARIDLNLLVCLKVLIEELSVTRAAARLCLSQSAVSKSLAKLREQFDDPLFVRTSYGLNA 79 Query: 65 TPLMVSMEQNLAEWMQMSNLLLDKP-HHQTPRGLKFELAAESPLMMIMLNALSKQIYQRY 123 TP + ++ L + LL +F++AA + +++ I++ Sbjct: 80 TPKALFLKPKLDVLVNQLELLTQPAHFSPQSSEYRFQIAAVESVYPLIMPYFLPTIFRHG 139 Query: 124 PQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVW 183 P +I W + + GE+D G +G++ +L P I + ++ D Sbjct: 140 PHLSISTHAWTEQTFRKLQVGELDFGLTGKDIDINDAKLTLLPPADICEQEIYRDNQRCV 199 Query: 184 LRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 +R+ HP L WNL ++L H+ + + +D W LD L +LG ER IA+++P+F + Sbjct: 200 VRRGHPVLQYDWNLSSYLNLRHVQVRCDGNDRWLLDYRLADLGYERDIAITVPDFNSAAS 259 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 + D + A + + + L + LP+ F + +TL WH+ ++P Sbjct: 260 LCTYTDFIFTA-PSHFTHWVAKQMDLVELPLPMEFP-------PMAYTLFWHRERENDPA 311 Query: 304 IVWLRETIK 312 + WLRE I+ Sbjct: 312 LRWLRELIQ 320 >UniRef50_UPI0001745DD5 transcriptional regulator, LysR family protein n=1 Tax=Verrucomicrobium spinosum DSM 4136 RepID=UPI0001745DD5 Length = 290 Score = 230 bits (587), Expect = 6e-59, Method: Composition-based stats. Identities = 34/304 (11%), Positives = 87/304 (28%), Gaps = 23/304 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L+ L + + + + ++AA+ +V+ ++S+ + KL + LF T Sbjct: 1 MELHQLRYMVAVARTGNFSRAAQTCHVSQPSLSQQIQKLEDELGERLFDRLRRHAKLTQA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQ-TPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 ++ + + + + + +L L +YP Sbjct: 61 GERFLPRAVRILEEMDAATREARAANDLDQGRITVGVLPTIAPYLLPKLIAAFSAKYPGV 120 Query: 127 TIKLRNWDYDSLDAI-TRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + + L + EVDI + L + LF + + L Sbjct: 121 QVVVHEDTTARLRELTAACEVDIAIAS----------LPLQDERFEVRELFDEELLLALP 170 Query: 186 KDHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 +H + + + L I + + + ++ + E + Sbjct: 171 NNHRLVDQKKIIPEDLLEEKFILMKEGHCLGDQVLHFCHRQDFHPQVSCRSAQMETVQSL 230 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH-NPK 303 + + PR ++ + +L + W ++ Sbjct: 231 VQS--GMGITLVPRMALQEDRSVKPVYRSL-------SDPSPKRTIVAFWPRQRPLGKAA 281 Query: 304 IVWL 307 WL Sbjct: 282 AAWL 285 >UniRef50_A6VSJ2 Transcriptional regulator, LysR family n=28 Tax=Proteobacteria RepID=A6VSJ2_MARMS Length = 328 Score = 230 bits (587), Expect = 6e-59, Method: Composition-based stats. Identities = 81/317 (25%), Positives = 134/317 (42%), Gaps = 19/317 (5%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 ++ +DLNLL+ L L+ E+ V++AA+R++ + A+S +LA LRA F+DPL V L Sbjct: 21 NNLRRIDLNLLVTLHALLVEKHVSRAAQRLHKSQPAISHALANLRAIFNDPLLVRRTGKL 80 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDK-PHHQTPRGLKFELAAESPLMMIMLNALSKQIYQ 121 T + L E + L+++ T F LA ++L L + + Sbjct: 81 ELTSRANELLPTLTEALHQLGALIEQPTFESTQAKRVFRLAMSDYGSRVVLPGLIQILRS 140 Query: 122 RYPQATIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 R P +++ L + GE+D+ F S L + LF + Sbjct: 141 RAPGIDLQVIQGSRTSMLTGVYDGEIDMAFGVFNSP---------LSDELHTHTLFIEHF 191 Query: 181 CVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQ 240 K+ + +L PHI + + +++ ++N L G R IAM+LP + Sbjct: 192 ICAADKNTLPKTGSLEKTQWLSRPHILVAMQTNESNEIENALHREGVSRRIAMTLPHWGV 251 Query: 241 SLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 + M A D +L A A R + + L L P P D F+++WH R Sbjct: 252 ASHMVANTDLILTA-ARRSFDLFLEDSPLQLFTPPYPID-------PFKFSMVWHSRRES 303 Query: 301 NPKIVWLRETIKNLYAS 317 + WLR TI + Sbjct: 304 DAGHNWLRHTIIEMLRE 320 >UniRef50_A3QJ07 Transcriptional regulator, LysR family n=25 Tax=Alteromonadales RepID=A3QJ07_SHELP Length = 330 Score = 229 bits (586), Expect = 7e-59, Method: Composition-based stats. Identities = 97/323 (30%), Positives = 163/323 (50%), Gaps = 14/323 (4%) Query: 1 MK-KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSP 59 M ++ +DLNLL+ LQ+L++ERSVT+AA R++++ SA+SKSL +LR DPLF+ + Sbjct: 1 MNLDNLARIDLNLLVMLQVLLEERSVTRAASRLHLSQSALSKSLNRLRDTLGDPLFIRTA 60 Query: 60 LGLSPTPLMVSMEQNLAEWMQMSNLLLDKP-HHQTPRGLKFELAAESPLMMIMLNALSKQ 118 GL PT + Q L + +Q L P + +F A ++ Sbjct: 61 HGLKPTAHAALLGQQLPDMLQGLYQLTQPPSFNPASSRRQFSFAMVESAYETLIPYFIGP 120 Query: 119 IYQRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSD 178 + P + W SL ++ +G++D G +GR+ +P+S ++ LP I ++ LF+D Sbjct: 121 LLNNAPNLRLDSYLWTEKSLSSLQKGQIDFGITGRDINPQSDLIIDRLPEGIAHQTLFTD 180 Query: 179 VPCVWLRKDHPALHQ----TWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMS 234 +R+ HP L W+LD +L H+ + E ++ WALD L + G+ R ++ + Sbjct: 181 HQVCLVRQGHPMLPAIRNHQWDLDIYLEMSHVQVRCEGNEWWALDYFLAKSGQRRHLSTT 240 Query: 235 LPEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLW 294 +P+F + + A D L+ + + +L+ L + LP F + + LLW Sbjct: 241 VPDFYGAASVCAHSD-LIFTLPSSFAAHARKLYALEELPLPFDF-------HSLAYVLLW 292 Query: 295 HKRNSHNPKIVWLRETIKNLYAS 317 H+RN P W+RETI A Sbjct: 293 HERNDDEPGHKWIRETICKRVAQ 315 >UniRef50_A5VEA0 Transcriptional regulator, LysR family n=1 Tax=Sphingomonas wittichii RW1 RepID=A5VEA0_SPHWW Length = 309 Score = 229 bits (586), Expect = 8e-59, Method: Composition-based stats. Identities = 63/318 (19%), Positives = 127/318 (39%), Gaps = 13/318 (4%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 + LDLNLL+ L L E++VT+AA+RIN++ +S +L KLR F DPL + Sbjct: 1 MHLRGLDLNLLIALDALFTEKNVTRAAERINISQPGMSAALQKLRWHFSDPLLERVGRRM 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQIY 120 T ++ + E + L DKP P F + A + I+ L +I Sbjct: 61 ELTVRGRALADPVREILIKVRDLTDKPEEFDPATARRVFRIGATTFCSDILAAPLLCRIE 120 Query: 121 QRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 + P +++ + D++ + G++D + L S ++D F+D Sbjct: 121 RIAPNISVQFEDLATDTVHRLVDGQLDFAITISARILSDEVNLDSSLSSLDL---FTDAF 177 Query: 181 CVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQ 240 + + + + D P+I + + + ++ ++ I LP F+ Sbjct: 178 VLVTSRQNSRVGDAVTFDQLCELPYIETRFGNVIAGISEQMWRQQPKQPQIRAWLPNFQL 237 Query: 241 SLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 +L + D + + Q + + + + +P+ +++ L WH+RN Sbjct: 238 TLDTVSHTDMVAIVPL-HLAQLHGDRYNVRTLPVPVEMPTIEER-------LFWHQRNDQ 289 Query: 301 NPKIVWLRETIKNLYASM 318 + W + ++ Sbjct: 290 DAGHSWFKGLLQETVQGF 307 >UniRef50_B0C7Y6 Transcriptional regulator, LysR family n=1 Tax=Acaryochloris marina MBIC11017 RepID=B0C7Y6_ACAM1 Length = 305 Score = 229 bits (585), Expect = 1e-58, Method: Composition-based stats. Identities = 74/320 (23%), Positives = 134/320 (41%), Gaps = 23/320 (7%) Query: 1 MKKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPL 60 M +DLNLL + +M E +V++AA+R+N+T AVS +L +LR +D LF+ P Sbjct: 1 MHN---QIDLNLLHIFEAVMMELNVSRAAERLNMTQPAVSHALRRLRRITNDELFLKVPS 57 Query: 61 GLSPTPLMVSMEQNLAEWMQMSNLLLDKP-HHQTPRGLKFELAAESPLMMIMLNALSKQI 119 G+SPTP + + + E + L L P F LA + + L L + Sbjct: 58 GVSPTPKALELWGPIREGLVHIRLALSPPSFEPFSSMQTFTLAMADYSVALFLPKLLPIL 117 Query: 120 YQRYPQATIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSD 178 P I++ ++ + + E+D+ + + + + D Sbjct: 118 AHSAPNINIRIVPNTNINAAKLLEQSEIDLAMGRFYRST----------VRLRVQEIIGD 167 Query: 179 VPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEF 238 +RKDHP H+ L +++ H+ + T +D L+E+ R IA+++ +F Sbjct: 168 RYICIMRKDHPLAHKRLTLKQYIKADHLLVTLTGEATGLVDKQLREMDLSRRIALTVNQF 227 Query: 239 EQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRN 298 + A D + A R + L + LPL + ++WH+R+ Sbjct: 228 TLVPELIAGSDLIS-AIPLRMVERNPFRTDLHITELPLKIAPAF-------LQMMWHERS 279 Query: 299 SHNPKIVWLRETIKNLYASM 318 +P WLR + + + Sbjct: 280 QVDPAHEWLRSQLFEIVQDL 299 >UniRef50_Q2IYM8 Transcriptional regulator, LysR family n=2 Tax=Rhodopseudomonas palustris RepID=Q2IYM8_RHOP2 Length = 317 Score = 229 bits (585), Expect = 1e-58, Method: Composition-based stats. Identities = 67/316 (21%), Positives = 133/316 (42%), Gaps = 21/316 (6%) Query: 4 SITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLS 63 ++ +DLNLL+ + +++ AA+++ ++ AVS +L +LR FDDPLFV + G+ Sbjct: 5 NLRNVDLNLLIVFDAVYATGNISHAARQLALSQPAVSNALTRLREHFDDPLFVRAGRGVK 64 Query: 64 PTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQIYQ 121 PT M + + E +++ D F + PL +++ + ++I Sbjct: 65 PTLRSQQMIEPVREALRLIRQQFDGDRSLDLGSYKRTFRIVIVDPLEAMLMPTMLREISA 124 Query: 122 RYPQATIKLR-NWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 PQ TI+ R W+ + DAI G +D+ + ++ + Sbjct: 125 HAPQVTIESRPPWNTNVADAIIAGTLDLA----------CYTFPVSAPGLVFKTICPCDH 174 Query: 181 CVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQ 240 + R+ HP + T + +TFL +++ E +D + G R IA + + Sbjct: 175 VIVARRGHPKIGATLDAETFLSLAQVALIPELRGHTNIDRDITTRGGNRRIAYMVNKVWS 234 Query: 241 SLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 + D + + R+ + L + P+P + ++WH++N+ Sbjct: 235 MPGVVGSTDLVTV-MPRRFAELMAPKFGLQIFESPIPISPQ-------DYHMIWHEKNTD 286 Query: 301 NPKIVWLRETIKNLYA 316 +P WLR+T+ Sbjct: 287 DPGHKWLRDTMVKAMQ 302 >UniRef50_B6JAE3 MexT protein n=1 Tax=Oligotropha carboxidovorans OM5 RepID=B6JAE3_OLICO Length = 311 Score = 229 bits (585), Expect = 1e-58, Method: Composition-based stats. Identities = 73/322 (22%), Positives = 141/322 (43%), Gaps = 25/322 (7%) Query: 1 MK-KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSP 59 M K++ LDLNLL+ + RS T AA +++++ AVS +L++LR DPLFV Sbjct: 9 MHQKNLARLDLNLLVVFDAIASARSTTLAATQLSLSQPAVSHALSRLRRLIGDPLFVRGR 68 Query: 60 LGLSPTPLMVSMEQNLAEWMQMSNLLLD-KPHHQTPRGLKFELAAESPLMMIMLNALSKQ 118 TP M + + + ++L P F +AA M+ ++ L + Sbjct: 69 GRFVLTPRAEGMVLQVRDILNAVGVVLANAPFDPAENERTFRIAASDYTMLTIMPTLVRT 128 Query: 119 IYQRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSD 178 +++ P+A +++ + ++ + ++D F + + LF + Sbjct: 129 LHRASPRAKLEVFSVGSQTIAQLESNDLDCTFWALKPPGAPYVTMP----------LFRE 178 Query: 179 VPCVWLRKDHPAL----HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMS 234 +L + HP LD ++ YPH+ + S+ +D L +GR+RTI ++ Sbjct: 179 SSKGFLDRRHPLAKPANRGRLTLDDYVGYPHVIAKFRDSNPSPVDVALAAVGRKRTIGLA 238 Query: 235 LPEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLW 294 F ++ + + L+AT P + + L LP+ + + ++L+W Sbjct: 239 SSSFIGNITALSGTN--LIATLPSRLSSIAESYGLKSFDLPIRIE-------DYTYSLVW 289 Query: 295 HKRNSHNPKIVWLRETIKNLYA 316 H+R +P +WLR+ I + Sbjct: 290 HQRTDADPACIWLRKVIAQTIS 311 >UniRef50_D1RUJ7 Transcriptional regulatory protein n=1 Tax=Serratia odorifera 4Rx13 RepID=D1RUJ7_SEROD Length = 313 Score = 229 bits (585), Expect = 1e-58, Method: Composition-based stats. Identities = 55/318 (17%), Positives = 121/318 (38%), Gaps = 19/318 (5%) Query: 1 MKKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPL 60 M+ L +N+L L ++ R+++ AA+++N + +S+ LA+LR F DPL V Sbjct: 1 MRTQFAALSINMLQVLHAVLTTRNLSHAAEKLNSSQPQLSRQLAQLREAFGDPLLVRHGR 60 Query: 61 GLSPTPLMVSMEQNLAEWMQMSNLLLD-KPHHQTPRGLKFELAAESPLMMIMLNALSKQI 119 +P + L + + L F A+ + ML L + Sbjct: 61 EYVLSPRGQEIILPLEKLINELKELSQKPEFEPLLCSRCFRFASSDYVAEHMLPQLVDYL 120 Query: 120 YQRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 P+ +++ W + + E+D+ ++ P + +L DV Sbjct: 121 QTVAPKVSVEYFTWKPNDYPLLANAELDLA----------TTMIKEAPSGLRGRILGEDV 170 Query: 180 PCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFE 239 P + H + + + H+ + +D L+E G R +A+++P F Sbjct: 171 PVCVMSARHVLAGKALEAKDYASWRHVRVSGGGDKDSFIDRELKEYGIYRQVALTVPFFS 230 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 ++ + + + LL+ + + ++ + + + ++WH+R Sbjct: 231 AAMEVVSSSN-LLVTIPKHIAIMMAGKYNVTWCSIDFVKESHR-------YWMIWHERTH 282 Query: 300 HNPKIVWLRETIKNLYAS 317 P+ W R ++ + A Sbjct: 283 MAPEHKWFRNVVREIVAG 300 >UniRef50_Q7N4W1 Hca operon transcriptional activator n=2 Tax=Photorhabdus RepID=Q7N4W1_PHOLL Length = 294 Score = 229 bits (585), Expect = 1e-58, Method: Composition-based stats. Identities = 45/310 (14%), Positives = 105/310 (33%), Gaps = 25/310 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L + +E + TKAAK+++ ++S+ + L + L + +S T Sbjct: 1 MELRHLRYFIAVAEELNFTKAAKKLHTAQPSLSQQIKDLEDYIGSTLLERNKRRVSLTKA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQAT 127 Q ++ + + + + +L + +P A Sbjct: 61 GEVFLQQARLILENAEKAKKMARRAAQEQIVLTIGFVPSAEVKVLPEVIPIFRLAHPGAK 120 Query: 128 IKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRK 186 ++L + + + + +G++D+ F S ID++V+ ++ V + Sbjct: 121 VELISLFNPGQEEKLLQGDIDVAFMRPPIKSDS----------IDFKVILNEPLVVLMPA 170 Query: 187 DHPAL-HQTWNLDTFLRYPHISICW--EQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 +H + +++ I+ ++N E I + L Sbjct: 171 NHRLRYCEKISVNDLQGENFITPDPTQSGVLQQIIENYFTEHNVVPNIIQTANNMLLILN 230 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 M NL A P Y ++ PL + + W K N+ + Sbjct: 231 MV--SLNLGCAIVPFYITSIMTD---AVICRPL-----SGYSPTIELIMAWRKDNT-SEL 279 Query: 304 IVWLRETIKN 313 ++ L + ++N Sbjct: 280 LLHLIDVVEN 289 >UniRef50_Q1R0T8 Transcriptional regulator, LysR family n=9 Tax=Gammaproteobacteria RepID=Q1R0T8_CHRSD Length = 308 Score = 229 bits (585), Expect = 1e-58, Method: Composition-based stats. Identities = 67/316 (21%), Positives = 123/316 (38%), Gaps = 22/316 (6%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 + +DLNL+ L + SVT AA ++NVT +VS SL++LR FDDPLF + G++P Sbjct: 1 MRPIDLNLVRTFVTLYESGSVTLAAHKLNVTQPSVSYSLSRLRELFDDPLFSRTRDGMAP 60 Query: 65 TPLMVSMEQNLAEWMQMSNLLLDKPHHQTP--RGLKFELAAESPLMMIMLNALSKQIYQR 122 T + + + + + L H P +F LA +L + + + Sbjct: 61 TFCAMRLYTSFRQALTQIEQTLSDAQHFDPEQSQRRFRLALTDLGETTLLAPILRHMRDL 120 Query: 123 YPQATIKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPC 181 P +++ + D + VD R+ S + + + Sbjct: 121 APGVELEVVPLEIDKVVSWFDNKSVDAVICSRDIQAPS----------LGRRPIIEERYV 170 Query: 182 VWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQS 241 L + HP + QT +++ F R H+ + + +++VL+E R +++ +P F Sbjct: 171 GLLGRRHPRIGQTLSMEAFSREDHVQVSP-TTGHGLVEDVLKERDITRKVSVVVPHFSAL 229 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 + L + + + Q L V LP V L W ++ + Sbjct: 230 PRLLESTSLLAI-LPEQIAGLFTQQADLKQVELPFDIP-------PVEVALYWSRQVDDS 281 Query: 302 PKIVWLRETIKNLYAS 317 W R T+ + Sbjct: 282 AAQEWFRRTLIEATSR 297 >UniRef50_Q3JR86 LysR-family regultor n=70 Tax=Proteobacteria RepID=Q3JR86_BURP1 Length = 508 Score = 229 bits (584), Expect = 1e-58, Method: Composition-based stats. Identities = 71/324 (21%), Positives = 135/324 (41%), Gaps = 24/324 (7%) Query: 1 MKKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPL 60 M + +D LL L L+ ERSVT+AA ++N + A+S +L +LR DPL V Sbjct: 200 MSQQREAIDTYLLRVLHTLLMERSVTRAAVKLNQSQPAISAALRRLRDITGDPLLVRGKS 259 Query: 61 GLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQ 118 G+ PT + + + + ++ + + H+ P + + L ++ + + ++ Sbjct: 260 GMVPTEYGLRLLEPVQNALREIERIKFQQHNFDPATSIRCYRIGCPDYLNVLFVPTVVER 319 Query: 119 IYQRYPQATIKLRNWDY--DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLF 176 Q P AT++ + D A+ G++DI P + LF Sbjct: 320 FRQAAPNATLEFHSLGPAFDYELALEDGKLDIVVGNWPEP----------PEQLHLSNLF 369 Query: 177 SDVPCVWLRKDHPALHQ-TWNLDTFLRYPHISICWEQ-SDTWALDNVLQELGRERTIAMS 234 D + HP + LD +L PH++ A+D L +R + ++ Sbjct: 370 VDEIVCLMSNSHPFAKRGGLTLDQYLNAPHLAPTPYSVGQRGAIDVHLARERLKRHVVVT 429 Query: 235 LPEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLW 294 LP F + ++ + D + T + +Y + L +V PL F + + LW Sbjct: 430 LPYFNLAPYVLVKSDLIFTTT-RLFADHYAKFLPLSVVPAPLDFP-------PMQYYQLW 481 Query: 295 HKRNSHNPKIVWLRETIKNLYASM 318 H+R ++ ++ WLR + ++ Sbjct: 482 HERCHYSDEVRWLRGLVAEATRTL 505 >UniRef50_A6EW06 Transcriptional regulator n=2 Tax=Marinobacter RepID=A6EW06_9ALTE Length = 315 Score = 229 bits (584), Expect = 1e-58, Method: Composition-based stats. Identities = 67/315 (21%), Positives = 129/315 (40%), Gaps = 20/315 (6%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 + T +L LL +M ERSVT+AA R+ +T AVS +++++R ++DPLFV + P Sbjct: 1 MKTQELQLLYIFDAIMTERSVTRAADRLAMTQPAVSNAISRMRQIWNDPLFVRKGRNIEP 60 Query: 65 TPLMVSMEQNL-AEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRY 123 T +S+ + ++N + F +A ++ ++ L + + Sbjct: 61 TSYALSLWDQVGDPMFALTNAVSATQFDPASARRTFRIAVTDVIVEMIWRQLIDLLEREA 120 Query: 124 PQATIKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCV 182 P + + + S D + VD+ +L+ ++ L + Sbjct: 121 PGVDVHAVPYTPEGSYDDLRSAHVDLAIG----------VLNQHDYSLRSTWLLDSGFVL 170 Query: 183 WLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 +R DHP + ++ FL H+ + ++D+ L + G+ R IA ++ F Sbjct: 171 AMRADHPLAGRQITMEEFLEARHLLVTMSGDAHGSVDSYLDQKGQSRRIAATMNHFASVP 230 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 + + + + A Q + L + LP D L+WH R+ P Sbjct: 231 QVLRESNLIA-AVPELISQDCGFVDGLWMGELPFDVD-------PTSLYLIWHARHDREP 282 Query: 303 KIVWLRETIKNLYAS 317 I+W+R I+ L + Sbjct: 283 GIIWIRNHIERLLQA 297 >UniRef50_A8GG55 Transcriptional regulator, LysR family n=1 Tax=Serratia proteamaculans 568 RepID=A8GG55_SERP5 Length = 310 Score = 228 bits (583), Expect = 2e-58, Method: Composition-based stats. Identities = 76/319 (23%), Positives = 133/319 (41%), Gaps = 23/319 (7%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 +++ +DLNLL+ + L Q R+VT A +R+N +VS +LA+LR FDDPLFV S G+ Sbjct: 1 MNLSNVDLNLLVVFEALYQTRNVTVAGQRLNRAQPSVSNALARLRTLFDDPLFVRSGGGM 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPR---GLKFELAAESPLMMIMLNALSKQI 119 PT + + ++ + L P P +F LAA + +L + ++ Sbjct: 61 LPTARAHQLMLQIQPVLEQIHQALTPPTRFDPATASQRRFRLAAGDYADITLLPTIISRL 120 Query: 120 YQRYPQATIKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSD 178 Q P I++ D + + RGE+D+ G +P + + LF++ Sbjct: 121 RQAAPGIDIRVSRLDRRTVVQQLERGEIDVALGGHLE----------VPEGMLVQPLFNE 170 Query: 179 VPCVWLRKDHP-ALHQTWNLDTFLRYPHISICW--EQSDTWALDNVLQELGRERTIAMSL 235 + HP ++WNL ++ PH + S +D L E+G ER +A + Sbjct: 171 SFTCIASRHHPQIAAESWNLQQYIGLPHALYAPSDDGSARGIIDQRLTEMGLERRVAATF 230 Query: 236 PEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWH 295 + A D + A + + ++ + LP V + Sbjct: 231 SHIIALPAVVAGSDLIA-TLATSVARQFADPSRIQFLPLPSELAMPAFPIECVAGRQV-- 287 Query: 296 KRNSHNPKIVWLRETIKNL 314 +P + WL +T+ L Sbjct: 288 ---KRDPALAWLCDTLSQL 303 >UniRef50_B7RZY7 LysR substrate binding domain protein n=1 Tax=marine gamma proteobacterium HTCC2148 RepID=B7RZY7_9GAMM Length = 318 Score = 228 bits (582), Expect = 2e-58, Method: Composition-based stats. Identities = 45/318 (14%), Positives = 100/318 (31%), Gaps = 22/318 (6%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 + + L L L Q +S +A++ ++++ A+S ++ + LF S L Sbjct: 20 LMNVSLRQLRAFVTLAQSQSFAEASELLHLSQPALSVAIKNMEQETGGSLFSRSTRSLQL 79 Query: 65 TPLMVSMEQNLAEWMQMSNLLLDKP-HHQTPRGLKFELAAESPLMMIMLNALSKQIYQRY 123 +P + + D + K +A M + Y Sbjct: 80 SPEGRQFLPVARRLLADWDQAFDDLGRAFNLQQGKIRVAVMPSFAMNQFPEALAPFQREY 139 Query: 124 PQATIKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCV 182 P I + + + +DA+ G+V++G + +++ LF+D Sbjct: 140 PDINISVEDVVMESVIDAVREGQVELGITFEPDQMD----------GLEFTPLFTDRWIA 189 Query: 183 WLRKDHPA-LHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQS 241 + P + + + P I++ + L E G T + + Sbjct: 190 LVHPKSPLAARKKLSWTALMEEPFIAMNRGSWSRNTTEKALSEAGVTPTRLLEANQLATI 249 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 M L A P+ C+ + + + +E + KR S + Sbjct: 250 GRMV--SVGLGTAVVPQLCRQQMESLGILCK-------TIGRPSIERQVGIFTRKRRSLS 300 Query: 302 PKIVWLRETIKNLYASMA 319 L + ++ ++ Sbjct: 301 GAAQALIAHLLEHFSKVS 318 >UniRef50_Q08NF6 Transcriptional Regulator, LysR family n=1 Tax=Stigmatella aurantiaca DW4/3-1 RepID=Q08NF6_STIAU Length = 322 Score = 228 bits (582), Expect = 2e-58, Method: Composition-based stats. Identities = 74/317 (23%), Positives = 138/317 (43%), Gaps = 21/317 (6%) Query: 4 SITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLS 63 ++++D NLL+ L L+QE V +A+KR+ ++PSA S +LA+LR D L V + L Sbjct: 14 QLSSIDTNLLVVLDALLQEGHVGRASKRVALSPSATSHALARLRELLGDELLVRAGRQLV 73 Query: 64 PTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPR--GLKFELAAESPLMMIMLNALSKQIYQ 121 TP +++ + + M+ +L P F + + ++L L + + Sbjct: 74 LTPRAIALAPQVRQLMEQMERILRPAESFHPAKLEHTFRVLTTDHIEFVLLRPLDRFLTD 133 Query: 122 RYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPC 181 P+ + R D+++ + G D+ F + + LP I + LF D Sbjct: 134 EAPRVILHNRPMVPDAVEELRGGRADLAFG----------VFTDLPDDISSQELFKDRFV 183 Query: 182 VWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQS 241 +R+ HP L + L F H+ + + T +D +L E +R + +L F + Sbjct: 184 TLVREGHPVLARPLTLKRFAELDHVLVAPRGTATSRMDLLLAERNLKRRVVRTLGSFLSA 243 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 F AQ D+ + + R L L ++ P+ ++ T +WH+R + Sbjct: 244 PFFVAQSDH-AVTLSARIADALAPLLGLRVLEPPIAYE--------YTLTQIWHRRWDAD 294 Query: 302 PKIVWLRETIKNLYASM 318 P WLR+ + + + Sbjct: 295 PAHAWLRQLTARVASGL 311 >UniRef50_Q13YH7 Transcriptional regulator, LysR family n=12 Tax=cellular organisms RepID=Q13YH7_BURXL Length = 317 Score = 228 bits (582), Expect = 2e-58, Method: Composition-based stats. Identities = 74/321 (23%), Positives = 134/321 (41%), Gaps = 24/321 (7%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 S+ +DLNLL Q +++ERS+T+A +R+ ++ A+S SL +LR FDDPLF+ + G+ Sbjct: 13 NSLDQVDLNLLRVFQAIVEERSLTRAGERLALSQPAISYSLGRLRTLFDDPLFIRTRAGM 72 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPR--GLKFELAAESPLMMIMLNALSKQIY 120 PTP+ + + +A + L H P F ++ + L + + ++ Sbjct: 73 QPTPIALELSAIVARALDTVREALRYAEHFDPAVSTRTFRVSLSDAGELAYLPPICEALH 132 Query: 121 QRYPQATIKLRNWD-YDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 Q+ P+ +++ + DA+ +D + ++ LF + Sbjct: 133 QQAPRVRLRIEPLPVEEIEDALRASRLDFAIGNLPTLTART----------RHQALFEET 182 Query: 180 PCVWL--RKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPE 237 R+ P + +L FL H+ I + ALD+ + G R IA+ LP Sbjct: 183 YVCMTRKRRGLPRAKE-LSLKAFLDASHVQITSVEHSHRALDDEFRTQGVGRHIALELPH 241 Query: 238 FEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKR 297 F + A D L R Q +N+ + LP+ + T+ WH+ Sbjct: 242 FVALPSVLAVTD-LFATLPRRLAQIFNRGGNFQIYELPVTLPIAA-------VTMHWHEH 293 Query: 298 NSHNPKIVWLRETIKNLYASM 318 + VWLR + ++ Sbjct: 294 FDQDEGNVWLRNLMADIVRHF 314 >UniRef50_Q46WQ0 Transcriptional regulator, LysR family n=1 Tax=Ralstonia eutropha JMP134 RepID=Q46WQ0_RALEJ Length = 304 Score = 228 bits (582), Expect = 2e-58, Method: Composition-based stats. Identities = 51/310 (16%), Positives = 98/310 (31%), Gaps = 22/310 (7%) Query: 7 TLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTP 66 + L L + QER T+AA++++++ S+VS + +L LF L T Sbjct: 8 NVSLRQLRAFIAVAQERHFTRAAEKLDLSQSSVSALIHELEDNLGLKLFDRHTRQLHITQ 67 Query: 67 LMVSMEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQIYQRYPQ 125 + + + + + ++ + +AA S +ML ++ +P Sbjct: 68 AGEELLPLVKKAVADIDSAIETSSELRTLGRGRVSIAASSIQAALMLPRFIREFSLGHPG 127 Query: 126 ATIKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 + + + + ++ GEVD G + L +D + + Sbjct: 128 VKVDIHDVSEHEVPKMVSSGEVDFGIGTIPEGQP----------DLTAHRLSTDPFVIVM 177 Query: 185 RKDHPALHQ-TWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 DHP L + T + P I LD L G + + + Sbjct: 178 PPDHPLLRRKTLRWEDVAPIPLIGPHKGNPIRDCLDTALAARGITLSRLHEVLLPLTMVG 237 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 M L +A + L V + +LL H S +P Sbjct: 238 MVEA--GLGIAVMSAAVTRLTEALGLATV-------MPTDPVIHREISLLVHADRSLSPP 288 Query: 304 IVWLRETIKN 313 R+ + Sbjct: 289 AQRFRDLLMR 298 >UniRef50_Q39AY8 Transcriptional regulator, LysR family n=1 Tax=Burkholderia sp. 383 RepID=Q39AY8_BURS3 Length = 331 Score = 228 bits (582), Expect = 3e-58, Method: Composition-based stats. Identities = 68/322 (21%), Positives = 119/322 (36%), Gaps = 25/322 (7%) Query: 4 SITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLS 63 + +DLNLLL +L + RS T+AA +++T +VS +L +LR FDD LFV + G+ Sbjct: 22 DLRNIDLNLLLVFDVLYRTRSTTRAADALHLTQPSVSNALKRLRTLFDDALFVKTADGMQ 81 Query: 64 PTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPR--GLKFELAAESPLMMIMLNALSKQIYQ 121 PTP ++ + E + L P F L I + L + + Sbjct: 82 PTPRADAIAARVDEGLASLRTALQAGRAFDPATSTRTFRLYTSDLGQAIFMPPLVAHLRR 141 Query: 122 RYPQATIKLRNWDYDSLDAITR-GEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 P I + D+ + + G++D+ + + L + LF + Sbjct: 142 VAPGIRIVTADPPLDAAQQMMKLGQIDLALG----------MFTGLHADFHQQRLFHETY 191 Query: 181 CVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQE----LGRERTIAMSLP 236 +R DHP + T + F H+S + L G R + + L Sbjct: 192 VALVRNDHPMIGATLTAEQFFAADHVSYTPTAGSHAHFEAALYALSPHAGSTRHVVLQLA 251 Query: 237 EFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHK 296 + + D + R + +L + V+LP WH+ Sbjct: 252 HSFGLERIVSSSDLIA-CIPSRLARELARLQDVRAVSLPF-------DTAPADIAQFWHE 303 Query: 297 RNSHNPKIVWLRETIKNLYASM 318 R + WLR + +L+ + Sbjct: 304 RYQRDEGHQWLRTLVYDLFHDL 325 >UniRef50_C0ZCK2 Transcriptional regulator n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZCK2_BREBN Length = 295 Score = 228 bits (582), Expect = 3e-58, Method: Composition-based stats. Identities = 44/309 (14%), Positives = 102/309 (33%), Gaps = 22/309 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L + + + +ERS ++AA R+++ ++S+ +AKL LF P + T Sbjct: 1 MELRQIRYVLAVAEERSFSRAANRLHLAQPSLSQQIAKLEKILGVSLFHRLPQHVELTDA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQT-PRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 Q + MS L + K + + +L + +++P Sbjct: 61 GQRFIQVAQTLVDMSEGLEREMRAYAVGESGKLLVGSLPITGAYVLPRVLPTFTKQFPGV 120 Query: 127 TIKLRNWDYDSLDAIT-RGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 ++L L+ + RG++D+ S E++ ++ + + + Sbjct: 121 ELQLMEETSSHLEQLLVRGKIDVSLLTMPISDPSLEIIPAIN----------EEIFLAVP 170 Query: 186 KDHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 +HP + +L P I + Q + ++ G I + + + Sbjct: 171 ANHPLAKRKEVDLAEVADQPFILLKEGQGFRTISLRLCEQAGFRPRIVFESSNIQTAQSL 230 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 A L A ++ L + P + K + + K + Sbjct: 231 VAAGMGLSFAP---------KMITLAPGTIEPPTYVRIKTKPSRTLVVAYRKDKPLSRPA 281 Query: 305 VWLRETIKN 313 + + Sbjct: 282 EAFVQCLIE 290 >UniRef50_Q5LKP3 Transcriptional regulator, LysR family n=1 Tax=Ruegeria pomeroyi RepID=Q5LKP3_SILPO Length = 324 Score = 227 bits (581), Expect = 3e-58, Method: Composition-based stats. Identities = 72/319 (22%), Positives = 129/319 (40%), Gaps = 24/319 (7%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 + LDLNLL+ + + +++ AAKR+NV+ +S +LA+LR DPLF+ S G+ Sbjct: 1 MDLRKLDLNLLVTFEAIYTAGNISHAAKRLNVSQPTISNALARLRDTVGDPLFIRSGRGV 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQIY 120 +PTP M + + +QM P F + L I++ L + + Sbjct: 61 APTPRATGMIGPVRDALQMIQSGFGDDERFDPSTTRRNFRIVVLDMLEPILMPPLVRAV- 119 Query: 121 QRYPQATIKLRN-WDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 Q Y T+++ D+ + + G +D+ + + I+ E + + Sbjct: 120 QDYRSVTLEMLPVMDFPIAEGLNDGSLDLALTTFDPQ----------HGDIECEQVGAAK 169 Query: 180 PCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFE 239 + RK HP + H+++ + +D VL+ +R I + F Sbjct: 170 IVIVARKGHPRIKGEMTPALVSEIGHVALIPKIRALSRVDEVLRYAKIDRHIVYMVTRFW 229 Query: 240 QSLFMAAQPDNLLLATAP-RYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRN 298 + A D L+A P + + + L + +P F E ++W KR+ Sbjct: 230 SFPHILANSD--LIAMMPGDFAAHAALFYPLDIFPVPFEFPEQ-------HIYMIWKKRH 280 Query: 299 SHNPKIVWLRETIKNLYAS 317 +P WLRE I Y Sbjct: 281 GLDPGHTWLREKIVEAYRE 299 >UniRef50_C2BX95 Transcriptional regulator n=1 Tax=Listeria grayi DSM 20601 RepID=C2BX95_LISGR Length = 297 Score = 227 bits (581), Expect = 3e-58, Method: Composition-based stats. Identities = 45/311 (14%), Positives = 89/311 (28%), Gaps = 21/311 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L + +T+A++ ++V SAVS+ + KL LF + T + Sbjct: 1 MELRQLKYFMEVASFEHMTQASENLHVAQSAVSRQITKLEEELGIKLFDRVGRNMQLTTV 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQ-TPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + P + + L +L A+ YP Sbjct: 61 GEDFLNQVKVAYNELLKAEAIVTEYSDPTKGSVRIGLPNSLASKVLPAVISAFRAEYPDV 120 Query: 127 TIKLRNWD-YDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 T + + GE+DI F + +++ F + V Sbjct: 121 TYHFVEGSNAELKQLLLDGEIDITFLSP---------VPVTDDSVEAVKFFDEKLKVIFP 171 Query: 186 KDHPALHQ-TWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 HP + +L+ I + ++ IA +F + Sbjct: 172 ATHPLADRYNVSLEELAAEKFILYPPNFDLFKIVTTAAEKKAISLDIAFQSQDFYTIQGL 231 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 L ++ P + L + K+L L+ K+ +P Sbjct: 232 V--GAGLGISILPEMILDGTIFKDTKALPL-------RNKELRRSVGLVVTKKRQLSPTE 282 Query: 305 VWLRETIKNLY 315 + IK + Sbjct: 283 KLFYQFIKKFF 293 >UniRef50_A3Y808 Transcriptional regulator, LysR family protien n=1 Tax=Marinomonas sp. MED121 RepID=A3Y808_9GAMM Length = 301 Score = 227 bits (581), Expect = 3e-58, Method: Composition-based stats. Identities = 71/315 (22%), Positives = 129/315 (40%), Gaps = 19/315 (6%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 + +DLNLL+ L + +SV+ AA + ++ SA S +A+LR F+D LFV + Sbjct: 1 MDLHQIDLNLLILFDALYRHQSVSLAADEVCISQSAFSHGIARLRKRFNDELFVRVNNQM 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPR--GLKFELAAESPLMMIMLNALSKQIY 120 PTP + Q+L + + + ++ H +F+++A +L L Q+ Sbjct: 61 QPTPRAEEIAQHLHQALPFIHNAINDSDHFDASMDKTEFKISATDYTEFSLLPKLVGQVS 120 Query: 121 QRYPQATIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 + P + + L + EVD S I++ SD Sbjct: 121 HQAPNIKLTVIGAKAPQPLTHLENNEVDFALGFSHEIEASSL--------IEHHTWLSDS 172 Query: 180 PCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFE 239 C RK+HPAL Q +LDTFL H+ + +D VL + +R +++ LP Sbjct: 173 YCTVARKNHPALTQGLDLDTFLELKHVRVSPWGEKQGIVDQVLAQHKLKRHVSLQLPSVL 232 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 + D L+L + + ++ + P+ + + WHK N+ Sbjct: 233 VAPHSIIHSD-LILTMPRIVAEQVAKQVEIEIFTPPISIP-------DYHLNIYWHKINA 284 Query: 300 HNPKIVWLRETIKNL 314 W+++ ++L Sbjct: 285 DKASFKWMKQLFQSL 299 >UniRef50_Q89IY7 Transcriptional regulatory protein n=1 Tax=Bradyrhizobium japonicum RepID=Q89IY7_BRAJA Length = 307 Score = 227 bits (581), Expect = 4e-58, Method: Composition-based stats. Identities = 83/320 (25%), Positives = 136/320 (42%), Gaps = 18/320 (5%) Query: 1 MKKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPL 60 M S LDLNLL + LM E SVT+AA + +T AVS +LA+LR DPLFV S Sbjct: 1 MFVSFRALDLNLLKVFEALMTEGSVTRAASALTMTQPAVSNALARLRDALGDPLFVRSGT 60 Query: 61 GLSPTPLMVSMEQNLAEWMQMSNLLLDK-PHHQTPRGLKFELAAESPLMMIMLNALSKQI 119 G+ PT V + + + E ++ LD+ +F L+ + +++ L + Sbjct: 61 GIRPTQRAVVLWEPIGEALESVRGALDEQVFDPARAQTEFSLSMSDYVSSLVMPDLLGHL 120 Query: 120 YQRYPQATIKLRNWD-YDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSD 178 + P+A + + D + VD + P AI L++ Sbjct: 121 GKVAPKARVHTVPNTILEIADQLEDNRVDCV-------MSVYVNEAQQPAAIRSRSLWTV 173 Query: 179 VPCVWLRKDHPALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPE 237 ++R+ HP + + TFL H+ + + D L G R + ++ Sbjct: 174 DYACFMRRGHPLAGMKRLSTRTFLNAGHVDVSLAGKTMPSYDLFLASRGLSRNLVATVNH 233 Query: 238 FEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKR 297 + + + Q D L+A P + ++ L L A+PLP + +L WH+R Sbjct: 234 YSAAYEVVRQSD--LIAVLPSDLRSQSRHAPL-LHAMPLPL-----QAPPRIVSLFWHQR 285 Query: 298 NSHNPKIVWLRETIKNLYAS 317 N P WLRET+ ++A Sbjct: 286 NDTVPAQRWLRETLVEMFAR 305 >UniRef50_B5JQV8 LysR substrate binding domain protein n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JQV8_9BACT Length = 300 Score = 227 bits (580), Expect = 4e-58, Method: Composition-based stats. Identities = 37/312 (11%), Positives = 99/312 (31%), Gaps = 23/312 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L+ L + + + T+AA++ V+ ++S + KL LF T Sbjct: 1 MELHQLRYFLAVAEAGNFTRAAEKCFVSQPSLSAQIIKLEGELGQKLFNRLGRRAELTRA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 +E + + ++ + ++ + + +RYP Sbjct: 61 GTFLESRARTILMEVENAERQIKENEEDIRGIVKVGVTPSVTPYLIPPVIRMCRERYPNL 120 Query: 127 TIKLRN-WDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 I ++ +D + +G +++ S ID E + + + + Sbjct: 121 EINIQENLRRRLIDEVQQGHLEVAISSYTGDAA----------NIDAEPILQEDLVLAVS 170 Query: 186 KDHPAL--HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 K H +++ F P + + + + + ++ E + + Sbjct: 171 KTHRLATQKSKVSIEDFKDEPLVLLGESATLGDKVFDFFDKMNIEPKVVALCSQVRSVKE 230 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 M L +A P + + + + + ++++ L H R +P Sbjct: 231 MV--NLGLGVAILPAMAKEEH-------LPFEIVYRSLVSERMKRLLFALTHSRRYLSPG 281 Query: 304 IVWLRETIKNLY 315 + I+ + Sbjct: 282 ARVFVDLIREVA 293 >UniRef50_A9FB16 Transcriptional regulator, LysR family n=3 Tax=Sorangium cellulosum RepID=A9FB16_SORC5 Length = 349 Score = 227 bits (579), Expect = 5e-58, Method: Composition-based stats. Identities = 74/316 (23%), Positives = 132/316 (41%), Gaps = 20/316 (6%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 + ++D +L++ L L+QERSVT+AA+R+ VT ++S +L++LRA F DPL V + Sbjct: 41 MRLPSVDTHLVVALHALLQERSVTRAARRVGVTQPSMSHALSRLRAHFGDPLLVQVGRQM 100 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTP--RGLKFELAAESPLMMIMLNALSKQIY 120 + + + AE ++ + + P F L A L +++L L++ + Sbjct: 101 TLSERARDLLPRAAEAVERLEQVFGQAERFDPRRSTRTFRLVATDNLELLVLPPLTRILA 160 Query: 121 QRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 P ++ RN D + + RGE+D +P L ++ Sbjct: 161 AEAPHVNLRCRNIPPDFAELLRRGELDAKLGRGGP----------VPDGCRSTQLAAEQL 210 Query: 181 CVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQ 240 +R+ HPA + + H+ I D +D L G R + +++ F Sbjct: 211 VCLMRRGHPASRKALTAARYAACEHLMISPHGEDHNVIDQELAARGLRRRVTLTVSHFLV 270 Query: 241 SLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 + F+ + D LLL + R + L + PL TL+W +R+ Sbjct: 271 APFILSGSD-LLLTVSARVAVALARKLDLVVRPCPLE-------ARGYTLTLVWPERSEG 322 Query: 301 NPKIVWLRETIKNLYA 316 + WLR I+ A Sbjct: 323 DEGHSWLRAAIERAVA 338 >UniRef50_A6VUW1 Transcriptional regulator, LysR family n=2 Tax=Marinomonas RepID=A6VUW1_MARMS Length = 321 Score = 227 bits (579), Expect = 6e-58, Method: Composition-based stats. Identities = 79/314 (25%), Positives = 152/314 (48%), Gaps = 19/314 (6%) Query: 4 SITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLS 63 ++ +DLNLL Q+L++E +VTKAA R+NV+ AVS+SL++LR F+DPLF+ + GLS Sbjct: 20 RLSDIDLNLLYVFQVLIEELNVTKAATRLNVSQPAVSRSLSRLRDVFNDPLFIRTSHGLS 79 Query: 64 PTPLMVSMEQNLAEWMQMSNLLLDKP-HHQTPRGLKFELAAESPLMMIMLNALSKQIYQR 122 T + LA+ ++ L+ +F L+ + +L + + Q+ Sbjct: 80 ATAKTQDLAPLLADTLKGLESLIQPSEFTPQSSKRRFILSTTDFGTLTVLPKILDKFRQK 139 Query: 123 YPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCV 182 P A + +++W+ D + + + +D+ + L P I L SD Sbjct: 140 APDAILDVKSWNEDMVAELDQTNIDVAVA---------VLSKEPPAGIRAMRLKSDRMVC 190 Query: 183 WLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 RK+HP + L+++L+ H+ + + + +A+D L+++G +R +++ LP F + Sbjct: 191 LARKNHPRIEGKLTLESYLQVSHVQVVLGRREYFAVDRELEKMGHKRHVSVHLPNFVPAA 250 Query: 243 FMAAQPDNLLLATAPRYCQYYNQL-HQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 + D LLL + + ++ + LP E ++++WH+R H+ Sbjct: 251 RVVMDSD-LLLTVPKLFAEDMAATVSEIVVHELPFA-------SREFDYSMIWHERFQHD 302 Query: 302 PKIVWLRETIKNLY 315 VW R ++ + Sbjct: 303 AAHVWFRGLLRQAF 316 >UniRef50_Q0SCY7 Transcriptional regulator, LysR family protein n=3 Tax=Actinomycetales RepID=Q0SCY7_RHOSR Length = 331 Score = 226 bits (578), Expect = 6e-58, Method: Composition-based stats. Identities = 76/318 (23%), Positives = 131/318 (41%), Gaps = 22/318 (6%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 + +DLNL+ LL + RSVT+ A+ + +T +VS SL +LR F+D LF+ S GL+P Sbjct: 28 MADVDLNLIRTFVLLYETRSVTRTAELLFITQPSVSHSLRRLRRQFNDDLFIRSSDGLAP 87 Query: 65 TPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQIYQR 122 T L SM L + +++ + + H F + A + +L + + R Sbjct: 88 TVLAASMYPQLHQALEVIDETVSGVGHFDAETSDRTFRICATDLGEISLLPGVLAALETR 147 Query: 123 YPQATIKLRNWD-YDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPC 181 P +++ D + + + +G D + + LF + Sbjct: 148 APGCAVQVTPLDFASAAEELRQGRADAVICTPRIDAP----------DLRRDPLFREGYV 197 Query: 182 VWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQS 241 HP + LD FL HI + + D L +GR R IA+ +P F Sbjct: 198 GLCALGHPRIGVEPGLDDFLAERHIVVDA-AAGHVDADQALARMGRRRDIAVRVPHFAVL 256 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 + AQ +L + R + + + + ALP+ V +L +R + Sbjct: 257 PELVAQTRHLAV-VPSRVAELFTRSSPVRTFALPVEIPN-------VEVSLFTVRRALPS 308 Query: 302 PKIVWLRETIKNLYASMA 319 P + WLRE I ++ + A Sbjct: 309 PGVDWLRELIADVLQAPA 326 >UniRef50_C6DDI5 Transcriptional regulator, LysR family n=4 Tax=Enterobacteriaceae RepID=C6DDI5_PECCP Length = 310 Score = 226 bits (578), Expect = 7e-58, Method: Composition-based stats. Identities = 72/320 (22%), Positives = 124/320 (38%), Gaps = 21/320 (6%) Query: 1 MKKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPL 60 M+ +DLNLL+ +L +ERSV+ AA ++++ AVS +LA+LR FDDPLF+ + Sbjct: 1 MENDFRGVDLNLLVTFLVLYRERSVSVAADKLHLGQPAVSGALARLRTLFDDPLFIRTGQ 60 Query: 61 GLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQ 118 + PT + L+ + +L +P P L + + ++ L K+ Sbjct: 61 VMRPTARADYLATQLSPAFEQLQSVLGEPESFDPLTDSRAITLGMTDWVEIWLMPLLLKR 120 Query: 119 IYQRYPQATIKLRNWDYDS-LDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFS 177 + P I L D ++ + VD+ S + L S Sbjct: 121 LKANAPHLRINLVATDPFLDVERLENDSVDLVISVASPQAG----------WLKQRALLS 170 Query: 178 DVPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPE 237 AL L+ + + H+ + + + +D++L++ G RTI + P Sbjct: 171 SGFRALWHPQQLALPSPVPLEVYSQQRHLLVTYRERAHGIVDDMLEKQGMTRTIYYTTPH 230 Query: 238 FEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKR 297 F + ++ + + Q + L +PL + LWH R Sbjct: 231 FSALPGILQHTPSVA-TVPEKLATLWCQHYGLNDSPVPLDLPT-------YTLSALWHAR 282 Query: 298 NSHNPKIVWLRETIKNLYAS 317 NP I WL E I A Sbjct: 283 QDSNPAIAWLYEQIAEAIAE 302 >UniRef50_Q475G5 Regulatory protein, LysR:LysR, substrate-binding n=9 Tax=Betaproteobacteria RepID=Q475G5_RALEJ Length = 304 Score = 226 bits (578), Expect = 7e-58, Method: Composition-based stats. Identities = 46/311 (14%), Positives = 96/311 (30%), Gaps = 23/311 (7%) Query: 7 TLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTP 66 L L + + ++AA + +T SA+S+ +A+L L + + T Sbjct: 2 NYTLRQLRVFLAVAETGGFSRAADAVGLTQSAISRGVAELEESLGVRLLDRTTREVVLTH 61 Query: 67 LMVSMEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQIYQRYPQ 125 ++ L + + L+ + +A + ++ +YP+ Sbjct: 62 AGQALAPALERLLGQLDDTLEDTRELGEHYRGRVVIAGAPTISARLMPMYVAACAAQYPE 121 Query: 126 ATIKLRN-WDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 + +R+ D ++ + G VD G + + E L +D C Sbjct: 122 IRLTVRDNVQADGIEQVRAGGVDFGVLIDPL----------VHDGLTIEPLVTDPFCFVC 171 Query: 185 RKDHPALHQ-TWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 R+DHP + T + + + +D V G + L Sbjct: 172 RRDHPLAQEKTVPWSALDGMRLVLLDFASGSRPLIDRVFGRHGIVPRVVQELGHSASVFG 231 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 M + + P Y L L + E ++ + S +P Sbjct: 232 MVEA--GIGASVLPTYSLPLPAASPLVWRPL--------VPREERRIVMVRREDRSLSPA 281 Query: 304 IVWLRETIKNL 314 + ++NL Sbjct: 282 AEAVWALVRNL 292 >UniRef50_C0ZI27 Transcriptional regulator n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZI27_BREBN Length = 307 Score = 226 bits (577), Expect = 9e-58, Method: Composition-based stats. Identities = 36/312 (11%), Positives = 97/312 (31%), Gaps = 22/312 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L + +E ++A++++ + S +S+ + L PLF ++ T Sbjct: 1 MELRQLEYFMAICEEMHFSRASEKLCTSQSNLSQQIKFLENELGVPLFDRLGKRITLTEA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQ-TPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + + + G + ++ +AL + ++ YP+ Sbjct: 61 GKVLLEQSRHVFSHIDYAREAIAAMKNNEGGTLTIGVLPGDADLLFDALLVEFHRLYPKT 120 Query: 127 TIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRK 186 ++ + ++ IT GE+D+G + +L I LF + + + + Sbjct: 121 SLSVIE-STRIVEQITSGEIDLGVT----------VLPEPDERITVIPLFHEEFALAVHR 169 Query: 187 DHPALHQ-TWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMA 245 HP + + + ++ + G + + L + Sbjct: 170 AHPLAKEKAIKFGQLQEVKMVMFPPDHQARQLINRYCIQEGFRLQPHIETTTLQSQLSLV 229 Query: 246 AQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIV 305 + + P ++ ++ L L++ K Sbjct: 230 KK--GIGGCILPSLLLQNVNDDEIAIINL-------LHPTPSQDICLVYRKDKYMGFAAR 280 Query: 306 WLRETIKNLYAS 317 +T++ S Sbjct: 281 TFIDTLQAYIQS 292 >UniRef50_Q0K6D4 Transcriptional regulator, LysR-family n=2 Tax=Cupriavidus RepID=Q0K6D4_RALEH Length = 301 Score = 226 bits (577), Expect = 1e-57, Method: Composition-based stats. Identities = 52/316 (16%), Positives = 100/316 (31%), Gaps = 22/316 (6%) Query: 7 TLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTP 66 + L L + QER T+AA++++++ S+VS + +L LF L T Sbjct: 2 NVSLRQLRAFIAVAQERHFTRAAEKLDLSQSSVSALIHELEGNLGLKLFDRHTRQLHITQ 61 Query: 67 LMVSMEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQIYQRYPQ 125 + + + + + +++ + ++A S +ML + ++ +P Sbjct: 62 AGAELLPLVKKAVADIDSVIENSSELRTLGRGRVSISASSIQAALMLPRVIREFCVSHPG 121 Query: 126 ATIKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 ++L + + ++ GEVD G + L SD + + Sbjct: 122 VKVELHDVSEHEVTKMVSSGEVDFGIGTIPEGQP----------DLSAHRLMSDPFVIVM 171 Query: 185 RKDHPALHQ-TWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 HP + T + P I LD L G + + Sbjct: 172 PAHHPLRRRKTLRWEDVAGLPVIGPHKGNPIRDCLDTALAARGISLQRVHEVFLPLTMVG 231 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 M L +A L V + +LL H S +P Sbjct: 232 MVDA--GLGIAVMSAAVTRLTSALGLATV-------MPTDPVIHREISLLVHADRSLSPP 282 Query: 304 IVWLRETIKNLYASMA 319 R+ + A +A Sbjct: 283 AQAFRDLLMRYRAKLA 298 >UniRef50_D0LKM3 Transcriptional regulator, LysR family n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LKM3_HALO1 Length = 307 Score = 225 bits (576), Expect = 1e-57, Method: Composition-based stats. Identities = 77/314 (24%), Positives = 127/314 (40%), Gaps = 22/314 (7%) Query: 4 SITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLS 63 ++ ++LNLL+ L L+ ERSV++AA+R V+ A+S+SL +LRA FDD L L Sbjct: 5 RLSEINLNLLVSLDALLTERSVSRAARRTGVSQPAMSQSLRQLRAIFDDALLARDRGVLV 64 Query: 64 PTPLMVSMEQNLAEWMQMSNLLLDKPHHQTP--RGLKFELAAESPLMMIMLNALSKQIYQ 121 TP + L + +LD P +F +A + +L L ++ + Sbjct: 65 LTPAAERLMVPLRHALVAVQRVLDGEKPFDPGRAERRFTIAVGDFAAVTLLPPLLERASR 124 Query: 122 RYPQATIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 P +R + + + GE D+ + ++L+ D Sbjct: 125 EAPGIGFDVRPAEPTRLFERLATGEFDLVIGAKLDASG----------DFMRQLLYRDGF 174 Query: 181 CVWLRKDHP-ALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFE 239 R+DHP +L+ + PH+ I +D +L E G++R IA+ +P F Sbjct: 175 VCMARRDHPELSGDALDLERYAALPHVLISPTGEGPSVVDRLLAERGKQRRIALRIPYFL 234 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 + M + D +L A + H L L PL LWH+R Sbjct: 235 AAPLMVVRSDLVLTA-PRSVAGAFASTHALALFEPPLELP-------SFGVYQLWHQRYQ 286 Query: 300 HNPKIVWLRETIKN 313 + WLRE + Sbjct: 287 SDDAHRWLRELVAA 300 >UniRef50_C0CQ02 Putative uncharacterized protein n=1 Tax=Blautia hydrogenotrophica DSM 10507 RepID=C0CQ02_9FIRM Length = 295 Score = 225 bits (576), Expect = 1e-57, Method: Composition-based stats. Identities = 54/310 (17%), Positives = 100/310 (32%), Gaps = 21/310 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L L + S TK A+ ++ +AV++ + L + PLF + + T Sbjct: 1 MNLRQLKYFVTLAETLSFTKTAQVFYISQTAVTQQIKSLESQLGVPLFRRTKRKVELTSA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPH-HQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 E ++ + + K T + + + + P Sbjct: 61 GAVFLPEAREILEKTQKAIVKTKLAYTGSSDTLRIGVVQGYEHSDMPEALHRFRAQNPNI 120 Query: 127 TIKL-RNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 +I + R+ D A+ +D+ F+ R + I L + V+L Sbjct: 121 SISIFRSDASDLYCALQEIRLDVAFNSRIAPGNLE------DFNISSHTLATYPLMVFLH 174 Query: 186 KDHPALH-QTWNLDTFLRYPHISICWE---QSDTWALDNVLQELGRERTIAMSLPEFEQS 241 HP + + +L P I L + + G TI +E Sbjct: 175 PSHPLVRKKECSLSDLNHEPLIFPDLRNDPSGYNKCLLDYFVQTGFVPTIVQESSNYEAI 234 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 L M A L +A P Y + A+PL + + + WH +N + Sbjct: 235 LLMVAAS--LGIAILPSYAHVLAHNLG-NITAIPL-----TGEISSLDIVIAWHNQNHN- 285 Query: 302 PKIVWLRETI 311 P I + Sbjct: 286 PTIQKFLSAV 295 >UniRef50_B8KV86 Putative transcriptional regulator, LysR family n=1 Tax=gamma proteobacterium NOR51-B RepID=B8KV86_9GAMM Length = 302 Score = 225 bits (576), Expect = 1e-57, Method: Composition-based stats. Identities = 60/317 (18%), Positives = 135/317 (42%), Gaps = 21/317 (6%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 ++ ++DLNLL ++ E ++T AA +I ++ A+S +L +LR DD LFV++ G+ Sbjct: 1 MNLRSVDLNLLTIFDAIVSEGNLTHAADKIGMSQPAISAALGRLRVTLDDELFVSTGRGV 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQIY 120 PT + +++ + ++ L P F +++ ++++ L + + Sbjct: 61 KPTQRALQLQEPVRRILEDVRAALTSTGEFDPESSDRVFTISSIDYGGIVVIPRLLRYLQ 120 Query: 121 QRYPQATIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 ++ + + ++ + R D+ + L + ++L ++ Sbjct: 121 KQQSPIIVNINPSQTGEAHRDVDRSSGDLTITSDPL----------LSPDHECKLLRREL 170 Query: 180 PCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFE 239 P RKDHP + + +++ F R H+ + + ALD L +LG R +P F Sbjct: 171 PYCLARKDHPDITGSLSVEQFQRNRHVLLYSNNTRGLALDAHLLQLGFNRECGARVPSFF 230 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 ++ D + + + + + L ++A P + ++WH+ + Sbjct: 231 NMPYIVGNTDMI-CTMPRQMAEDFARQFGLQVLAAPF-------DNWTASYFMVWHRSFN 282 Query: 300 HNPKIVWLRETIKNLYA 316 + WLR++I L + Sbjct: 283 GDSGHCWLRDSIFRLCS 299 >UniRef50_A0KKG7 HTH-type transcriptional regulator YidZ n=3 Tax=Aeromonas RepID=A0KKG7_AERHH Length = 324 Score = 225 bits (576), Expect = 1e-57, Method: Composition-based stats. Identities = 157/315 (49%), Positives = 215/315 (68%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 + + LDLNLL+ +LL+QERSVTKAAK++NVT VSK+LA+LR WFDDPLF+ + GL Sbjct: 2 RPLIDLDLNLLVVFRLLLQERSVTKAAKKLNVTAPTVSKALARLRDWFDDPLFLRTQRGL 61 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQR 122 PT L +++E+ L EW Q+S + + P G F L ESP + LN L IY+ Sbjct: 62 EPTNLSLTLEEELKEWFQLSGNIASLCGNAIPAGAAFRLVLESPFYISFLNDLPMVIYET 121 Query: 123 YPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCV 182 Y ++TI++ NWD+ SL+ I G+ D+GF RE+HP S ++ LP ID+EVLF D P V Sbjct: 122 YRKSTIRIMNWDHHSLNDIINGDADLGFCARETHPSSLARVNRLPYYIDHEVLFEDRPMV 181 Query: 183 WLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 +LRKDHP L +TWNLD FL YPH+S+ WE SD WALD++L + G R + + + FEQ+L Sbjct: 182 FLRKDHPLLARTWNLDNFLAYPHVSVVWEASDAWALDSLLDDEGLSRQVPIRVSSFEQAL 241 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 +AAQ D+ L+A P YC Y + H L++LPLP DE+ ++L++ F LLWHKRN+HN Sbjct: 242 HIAAQSDHELIAVVPSYCASYARQHHNNLISLPLPLDEALYRQLDIAFILLWHKRNNHNT 301 Query: 303 KIVWLRETIKNLYAS 317 K++WLR+ IK LY Sbjct: 302 KVLWLRDEIKRLYHQ 316 >UniRef50_Q3AG03 Transcriptional regulator, LysR family n=2 Tax=Clostridia RepID=Q3AG03_CARHZ Length = 302 Score = 225 bits (575), Expect = 1e-57, Method: Composition-based stats. Identities = 38/313 (12%), Positives = 97/313 (30%), Gaps = 25/313 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++ L + + S T+AA++++V +++ ++ L LF S + T Sbjct: 1 MEFRQLEYFYAVSKLNSFTRAAEQLHVAQPSITIAINNLEQELKVQLFDRSKRKVVLTDE 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTP-RGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 Q++ + ++ + + +L + + + K YP Sbjct: 61 GKLFLQHVEKILKDVKKAQSELEDLKNYKKGVIKLGIPPMIGAYLFPKIFKGFKNAYPHL 120 Query: 127 TIKLR-NWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + +R + + + GE+D+G + +L + D + + Sbjct: 121 ELHVREEGSWAMVSLLENGELDLGLIILPEQSENLCMLP----------ITKDQIVLCVS 170 Query: 186 KDHPALHQ-TWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 ++H + +L I + + + + G I +S + E + Sbjct: 171 ENHRFSQEKRISLRQLEDEQFILLKEDSYTRHKIIALCNYYGFSPNILLSSCQIETIKEL 230 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 + L + +V++ L + + L W K + Sbjct: 231 V--SNGLGITFLMNGITKKWD----KIVSIQLEEP------MNITIGLAWQKDRCLSRAA 278 Query: 305 VWLRETIKNLYAS 317 ++N S Sbjct: 279 QAFIGFVQNYTKS 291 >UniRef50_C9KJ25 Transcriptional regulator GltC n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KJ25_9FIRM Length = 307 Score = 225 bits (575), Expect = 1e-57, Method: Composition-based stats. Identities = 54/305 (17%), Positives = 108/305 (35%), Gaps = 24/305 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L Q + + T+AA+ + V+ SA+S+S+ KL LF T Sbjct: 1 MELTQLKYFQAMAKCHHFTQAAEEMAVSQSALSRSIQKLEQELGVTLFERHGRTSELTEA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQAT 127 ++ ++ L + L+ L L + +Q ++RYP Sbjct: 61 GQKFLFHVDRVIRELALAEQEIELDNGGAGVVHLSFLHSLGDTFLPLILRQFHERYPHID 120 Query: 128 IKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRK 186 +KL + L + +T GE DI + P + + L+S+ + + + Sbjct: 121 VKLNQQNSSMLSEQLTSGETDICLCSTMNEPDTAWMY-----------LWSEEMFLVVPE 169 Query: 187 DHPALHQ-TWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMA 245 DHP + NL P +++ E + ++ L I E + Sbjct: 170 DHPLAQKSRVNLREIEDEPFVALKPEYTLRQQVNQFLDLAESHPQIVFEGDEVHTLVSFV 229 Query: 246 AQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIV 305 A +L ++ P L +V +P+ F + + W+ +P + Sbjct: 230 AA--HLGVSILPHV----PCTEHLGVVFVPISFPLCK-----RAVGIAWNTSRPLSPAAM 278 Query: 306 WLRET 310 ++ Sbjct: 279 TFQQF 283 >UniRef50_A0LD87 Transcriptional regulator, LysR family n=1 Tax=Magnetococcus sp. MC-1 RepID=A0LD87_MAGSM Length = 322 Score = 225 bits (575), Expect = 2e-57, Method: Composition-based stats. Identities = 78/320 (24%), Positives = 131/320 (40%), Gaps = 21/320 (6%) Query: 1 MKKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPL 60 MK ++ DLNLL+ LM ER VT+A + + +T +A+S +L +LR FDDPLFV + Sbjct: 6 MKHNLNKFDLNLLVAFDTLMTERGVTRAGRALGITQAAMSNTLRRLRELFDDPLFVKTGS 65 Query: 61 GLSPTPLMVSMEQNLAEWMQMSNLLL-DKPHHQTPRGLKFELAAESPLMMIMLNALSKQI 119 + PTP + + +A ++ L + F L +++ L + + Sbjct: 66 SMEPTPRAIELSTPVALALEEVRKALNQEGFDPMMASENFRLGMIDYASAMLMPGLVRHM 125 Query: 120 YQRYPQATIKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSD 178 Q P+A +++ + D + + RG VD+ FS +P + LFS Sbjct: 126 SQVAPRAKMQVVDVGGDEEVANLERGAVDLVFSR----------FQWVPPKVCINRLFSM 175 Query: 179 VPCVWLRKDHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPE 237 +HP + + ++D FL H+ D +D L E+G +R I L Sbjct: 176 EYVAVFCPNHPGVEGGSLSMDAFLASRHVHYYPRGMDNTVVDETLAEMGEKRNIIGKLAS 235 Query: 238 FEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKR 297 F M A + + + + L + LP + L WH R Sbjct: 236 FGMLPAMLASSHVMAV-MPEGAAKVVARPLGLRVEKLPFKTPLLR-------MALAWHPR 287 Query: 298 NSHNPKIVWLRETIKNLYAS 317 +P VW R+ +K + Sbjct: 288 TDRDPSHVWFRQQVKFVLKE 307 >UniRef50_Q8XRG7 Probable transcriptional regulator transcription regulator protein n=1 Tax=Ralstonia solanacearum RepID=Q8XRG7_RALSO Length = 308 Score = 225 bits (575), Expect = 2e-57, Method: Composition-based stats. Identities = 65/314 (20%), Positives = 121/314 (38%), Gaps = 21/314 (6%) Query: 7 TLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTP 66 LDLNLL + + + R++T +R+ ++ AVS+ LA+LR + D LFV G+ PT Sbjct: 13 HLDLNLLELFESIWRTRNLTATGERLGLSQPAVSRGLARLRETYGDELFVRHRRGVEPTA 72 Query: 67 LMVSMEQNLAEWMQMSNLLLD-KPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQ 125 ++ + ++ + + ++ +F +A L L+ + PQ Sbjct: 73 FAQTLAEPVSAALAIVRRTIEKPTFSAAEDARRFRVALSDIGERYFLPRLAAWLADHAPQ 132 Query: 126 ATIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 +I + + L + GE+D+ L L + + LF + Sbjct: 133 VSIDTVSASREELLTGLASGEIDLAVGF----------LPGLGKQVHEKRLFQEKFVYIA 182 Query: 185 RKDHPALHQTWNLDTFLRYPHISICWEQSDT-WALDNVLQELGRERTIAMSLPEFEQSLF 243 R+DHP + PH+ + A++ VL +AM + F Sbjct: 183 RRDHPGIDGRLQASQLRALPHVVGSPHGTQHAAAVEKVLTGPRVRAVVAMRVGSFLSIGP 242 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 + A D + + ++ L L+A P+ F +++WH+R +P Sbjct: 243 IVADSDLVAV-VPSNLAALVSEHVGLQLIAPPVRFP-------SFEVSMVWHRRFHGDPG 294 Query: 304 IVWLRETIKNLYAS 317 WLR L+ Sbjct: 295 GAWLRGVFSQLFGE 308 >UniRef50_C8WSN1 Transcriptional regulator, LysR family n=1 Tax=Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 RepID=C8WSN1_ALIAD Length = 290 Score = 225 bits (575), Expect = 2e-57, Method: Composition-based stats. Identities = 48/313 (15%), Positives = 95/313 (30%), Gaps = 28/313 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L + + +S +AA I V+ A+S+++ KL PLFV + G+ TP Sbjct: 1 MELVQLEYFLAVAEYQSFRRAADAIRVSQPALSRAIQKLEGDLGAPLFVRTAQGVRLTPC 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTP-RGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + + + K + L L + + + +P Sbjct: 61 GEAFLPHARQALAEVAAGARKVAELAGQARGVLHVGLIYSLGTRFLPDVIRTFTRTHPGV 120 Query: 127 TIKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 T++L L + GE+DI F + + + + Sbjct: 121 TVRLSEAPTQKLLQQLDAGEIDIAFCT-----------PQHAPHLTLVEILQEELVAIVP 169 Query: 186 KDHPA-LHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMS-LPEFEQSLF 243 DHP +L P ++ E ++ E G +AM + + + Sbjct: 170 LDHPLAAKDQCHLSDLAGEPFVAYARESGIRHVIERYCAEAGFTPRVAMEGVEDLTVAGL 229 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 L LP+ + + + WH + +P Sbjct: 230 ------------VAAGVGVAVVPLHAQLDQLPVHV-LRLCEPCKRSVYMAWHTHTTLSPV 276 Query: 304 IVWLRETIKNLYA 316 +K + A Sbjct: 277 ARAFIAFVKRMCA 289 >UniRef50_D1P3H6 Transcriptional regulator, LysR family n=1 Tax=Providencia rustigianii DSM 4541 RepID=D1P3H6_9ENTR Length = 303 Score = 224 bits (573), Expect = 3e-57, Method: Composition-based stats. Identities = 74/319 (23%), Positives = 130/319 (40%), Gaps = 30/319 (9%) Query: 3 KS-ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLG 61 + IT +DL L + L++ER+VT+AA ++ +T AVS L+KLR F D LF+ S G Sbjct: 1 MNGITRIDLKQLRVFKALLKERNVTRAAAQMGLTQQAVSAQLSKLRDTFQDHLFLRSAQG 60 Query: 62 LSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQI 119 L PTPL +E + + L P P F ++A + ++L L ++ Sbjct: 61 LIPTPLAEQLEPRVNTVFESI-AALSPPDRFDPAEVYTTFVISATDYAVAVILPRLMAKV 119 Query: 120 YQRYPQATIKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSD 178 + P + +R+++ D +T G++D+ + + +P + LFS+ Sbjct: 120 RTQAPGLKLIIRDFESDRLYPLLTSGDLDLALTFP----------AFVPDGCQTKWLFSE 169 Query: 179 VPCVWLRKDHPALHQTWNLDTFLRYPHISICW-EQSDTWALDNVLQELGRERTIAMSLPE 237 R D P +Q + + P I + + + D+ G R I MS+P Sbjct: 170 HHICVTRSDSPMQNQQFTISDIADLPQIIVSPTRANLIGSADDWFASKGYSRNIVMSVPS 229 Query: 238 FEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLE-VPFTLLWHK 296 F + A D +A P ++ PL WH Sbjct: 230 FAAAPACIASTDC--IAFLPS-----------RILPNPLVRPIQLDDSPPSFDVIAAWHL 276 Query: 297 RNSHNPKIVWLRETIKNLY 315 R++ +P W+ ++ + Sbjct: 277 RSNQDPLHKWILSLLQQEF 295 >UniRef50_A4SSQ1 Transcriptional regulator, LysR family n=2 Tax=Aeromonas RepID=A4SSQ1_AERS4 Length = 322 Score = 224 bits (573), Expect = 3e-57, Method: Composition-based stats. Identities = 101/314 (32%), Positives = 167/314 (53%), Gaps = 10/314 (3%) Query: 4 SITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLS 63 + +DLNLL+ LQ+L++ER+ ++AA+R++++ SAVSK+L +LR FDDPLFV S GL Sbjct: 5 QLGRIDLNLLIILQVLLEERNGSRAARRLHLSQSAVSKALGRLRETFDDPLFVRSAYGLE 64 Query: 64 PTPLMVSMEQNLAEWMQMSNLLLDKP-HHQTPRGLKFELAAESPLMMIMLNALSKQIYQR 122 PT + ++Q L + + L+ P +F +A+ + ++ ++ Sbjct: 65 PTARALVLQQQLQPILLSLDNLIQPPDFDPASTEREFVIASMDSAFTLFAPLYLSELKRQ 124 Query: 123 YPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCV 182 P ++ W +SL +++G+VDI F+ RE+ S L +LP AI +L D Sbjct: 125 APGIRLRYEEWTENSLTEMSQGQVDIAFTVRENCISSDFRLDTLPNAICQRLLAIDDLTC 184 Query: 183 WLRKDHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQS 241 ++ DHPALH+ W+L +L YPH+ E D W LD+ L + R I ++P FE + Sbjct: 185 LVQHDHPALHEPEWDLARYLAYPHVQTYCEGRDRWMLDHKLAGMDLYRRIEATVPSFEAA 244 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 L M D + + + Y ++ Q++ L + LP+ D L+WH+R+ + Sbjct: 245 LRMGMHSDMI-VTLSRLYARHATQVYPLVPLPLPIALDSISHL-------LIWHQRHEED 296 Query: 302 PKIVWLRETIKNLY 315 P WLRET+ L Sbjct: 297 PGHRWLRETLLALI 310 >UniRef50_Q1N663 Regulatory protein, LysR:LysR, substrate-binding n=1 Tax=Bermanella marisrubri RepID=Q1N663_9GAMM Length = 306 Score = 224 bits (572), Expect = 3e-57, Method: Composition-based stats. Identities = 70/313 (22%), Positives = 122/313 (38%), Gaps = 22/313 (7%) Query: 7 TLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTP 66 +DLNL + + E S+T+AA+R+N+T A+S +L++LR DDPLFV + PTP Sbjct: 2 KIDLNLFTVFEAIYLEGSLTRAAERLNLTQPAISHALSRLRERLDDPLFVRQGHKMRPTP 61 Query: 67 LMVSMEQNLAEWMQMSNLLLDKPHHQTPRGL--KFELAAESPLMMIMLNALSKQIYQRYP 124 L + ++ ++ N L + HH P + +A + +L + K + P Sbjct: 62 LAQKLIPDIQAALRQLNGALQQSHHFNPAEAEKTYRVAMRDVMEATLLPPVLKGLDNIAP 121 Query: 125 QATI-KLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVW 183 + + D + GE+D I + L +D V Sbjct: 122 NIQLASVHIERRDMESKLASGELDFVVDVLLPTSEQ----------IYKKKLLNDELVVI 171 Query: 184 LRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 L + + + +LR HI + S +D L G R +A+ + + Sbjct: 172 YNPALSQLPEGFTEEEYLRAKHILVSTRASGPSLVDYALSAEGLNRNVALRCQHYYAACQ 231 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQ-LPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 A + +LL RY Q L +LP K + L WH+ + + Sbjct: 232 -VASDNGMLLTMPSRYASILLQHFPTLQRSSLPF-------KTSSIDVYLYWHESLNEDG 283 Query: 303 KIVWLRETIKNLY 315 W R+ ++ + Sbjct: 284 ANAWFRDMLQQVL 296 >UniRef50_Q1IRZ3 Transcriptional regulator, LysR family n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1IRZ3_ACIBL Length = 296 Score = 224 bits (572), Expect = 3e-57, Method: Composition-based stats. Identities = 39/315 (12%), Positives = 98/315 (31%), Gaps = 24/315 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++++ L + + + T+A++ +V ++S+ + KL A LF P T Sbjct: 1 MEVHQLRYFCAVARHGTFTRASEVEHVAQPSLSQQILKLEAELGARLFDRLPRSAKLTVF 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTP-RGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + N ++ + + T + + + +L L + R+P Sbjct: 61 GKAFLPNAERILRQLDEAKTELLEMTSNEKGEVTVGIIPTIAAYLLPKLLNGLSVRHPDV 120 Query: 127 TIKL-RNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 T+K+ + L + G +D+ + + E LF + L Sbjct: 121 TVKISEDITPVLLQRLHDGSIDMAIAALPIPGT----------ELASEELFEEKFYAVLP 170 Query: 186 KDHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 + H + +L R P + + ++ + ++ +F L M Sbjct: 171 EKHRRASRASISLADLNREPFLLLKEGHCFRDSVIAACNQAAMSPSVVFESGQFATILAM 230 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 + + ++ P + F K ++ + + Sbjct: 231 VSA--GMGVSAVPAMAVQPHPG---------CKFIPISGKHSSRKVGIVTSRHHFQGRAQ 279 Query: 305 VWLRETIKNLYASMA 319 L + +++ A Sbjct: 280 RLLLKQMRDACGKSA 294 >UniRef50_Q0VLU8 Transcriptional regulator, LysR family n=2 Tax=Alcanivorax RepID=Q0VLU8_ALCBS Length = 310 Score = 224 bits (572), Expect = 4e-57, Method: Composition-based stats. Identities = 74/314 (23%), Positives = 122/314 (38%), Gaps = 23/314 (7%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 ++ DLNL + + E S+T+AAK +N+T AVS +LA+LRA +DPLFV + Sbjct: 1 MHVSRFDLNLFVVFDAIYTEGSLTRAAKVLNLTQPAVSHALARLRARLNDPLFVRQGSRM 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQT--PRGLKFELAAESPLMMIMLNALSKQIY 120 PT +M + + L + F L L +L AL Q Sbjct: 61 VPTARARAMVSPVRHALGGFQRCLSEEGGFDASEAERTFVLGLRDGLEARLLPALMSQFM 120 Query: 121 QRYPQATIKLRNWDYDSLD-AITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 P ++ + + G +D+ +++ +LP AI+++V+ Sbjct: 121 DEAPGIKLQSLTVSRRQMATELASGRLDLA----------CDVMLALPEAIEHQVVLEGP 170 Query: 180 PCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFE 239 V +R+ HP +L +L H+ + + D L G R I + ++ Sbjct: 171 LVVLMRESHPLAQG-MDLPDYLAAQHVLVSSRREGPGLEDFGLARQGYRRHIRLRCQHYQ 229 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 +L Q D LLL + LV P P + L WH+ S Sbjct: 230 AALSTVQQTD-LLLTMPASLAGQLSDQG---LVWKPFP-----GGLPGLEMHLYWHRDQS 280 Query: 300 HNPKIVWLRETIKN 313 +P WLR+ + Sbjct: 281 ADPAHSWLRQRVLA 294 >UniRef50_B9JQ31 Transcriptional regulator n=1 Tax=Agrobacterium radiobacter K84 RepID=B9JQ31_AGRRK Length = 296 Score = 224 bits (571), Expect = 5e-57, Method: Composition-based stats. Identities = 64/313 (20%), Positives = 119/313 (38%), Gaps = 22/313 (7%) Query: 9 DLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLM 68 DLNL+ + + SV+ AA ++N+T +VS +L++LR DD LF + G+ PT + Sbjct: 3 DLNLIRAFIAIYETESVSGAAVKLNLTQPSVSHALSRLRDMLDDTLFTRTRDGMKPTFVA 62 Query: 69 VSMEQNLAEWMQMSNLLLDKPHHQTP--RGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 M + + P F+LA M L + ++ Q P+ Sbjct: 63 ERMYGIFRSALSEIETAIASRWSFDPKSSNQVFKLAFSDLGEMTFLPHILPRLSQEAPKV 122 Query: 127 TIKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 I++ + + L D G++D S E +F + + Sbjct: 123 GIEVVELEVEKLDDWFATGKIDAAIFNSTSAKVQS----------RSEPIFQERYVCLVS 172 Query: 186 KDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMA 245 HP + +L+ +L HI + +++ ++ +G R +++ LP F + Sbjct: 173 ARHPRIRDQVSLEQYLSEGHIVVSSHSG-HRQVEDQIRAIGAARQVSLRLPHFTGLHDIV 231 Query: 246 AQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIV 305 A+ + L R + + +PLP E L W + + Sbjct: 232 AKTELLA-TLPSRTAHMFASSGMVKYCTIPLPIP-------EFEVRLHWRETDGEIEAQA 283 Query: 306 WLRETIKNLYASM 318 WLRE +K+ + Sbjct: 284 WLREILKSCLQGL 296 >UniRef50_A1UXD8 Transcriptional regulator, LysR family n=41 Tax=cellular organisms RepID=A1UXD8_BURMS Length = 355 Score = 224 bits (571), Expect = 5e-57, Method: Composition-based stats. Identities = 66/300 (22%), Positives = 125/300 (41%), Gaps = 20/300 (6%) Query: 15 CLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSMEQN 74 LMQE+++++AA R++++ AVS +L +LR +PLF + G++PT ++ + Sbjct: 59 VFDALMQEQNLSRAAIRLHMSQPAVSNALTRLRQQLGEPLFTRTARGMTPTAQARTLYEP 118 Query: 75 LAEWMQMSNLLLDKPHHQTPRGLK-FELAAESPLMMIMLNALSKQIYQRYPQATIKLRNW 133 + + + + + L P F+L+ ++L L I R P + +++ Sbjct: 119 VRQALYLLQIGLGPQADFEPDTHHLFKLSMNDYGQTVLLPDLLAHIKSRAPNVMLSVQSD 178 Query: 134 DYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPALH 192 D S+ +T G +D+ L + YE L + V R HPA Sbjct: 179 DAGSIPAQLTTGTLDLAIDY----------LHFDNPELCYEPLHEEHLVVIGRAGHPAFA 228 Query: 193 QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQPDNLL 252 L + H+SI L+ VL R + + +P + + A+ D L Sbjct: 229 GGLALRGYEESGHVSIQPRDRRGSPLEIVLGSARVRRVVHLQVPHYLTIPALVAKSDLLG 288 Query: 253 LATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWLRETIK 312 R + + ++ L + LP+ + +L+WH++ P + WLRE + Sbjct: 289 -TIPRRLAERFADVYALQIAPLPIDI-------APIQVSLIWHRQQDAQPGLRWLREQVV 340 >UniRef50_B7CP85 Transcriptional regulator, LysR family protein n=1 Tax=Burkholderia pseudomallei 576 RepID=B7CP85_BURPS Length = 305 Score = 224 bits (571), Expect = 5e-57, Method: Composition-based stats. Identities = 73/320 (22%), Positives = 131/320 (40%), Gaps = 21/320 (6%) Query: 1 MKK-SITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSP 59 M I DLNLLL +L++ER V+KAA R +++ A+S+ L +LR F D L V + Sbjct: 1 MHMKHIRGADLNLLLAAFVLLEERQVSKAADRYHLSQPAMSRMLQRLRDTFGDELLVRTR 60 Query: 60 LGLSPTPLMVSMEQNLAEWMQMSNLLLD-KPHHQTPRGLKFELAAESPLMMIMLNALSKQ 118 G PT + L E + + LL T F +A I+ L ++ Sbjct: 61 GGFEPTVRGRYILHELGELLPRLDALLRGGLFDPTEAEDTFRVACTDYATTILGPRLFER 120 Query: 119 IYQRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSD 178 +++ P ++ + W + +AI G +D+ + +P + E LF D Sbjct: 121 VFREAPNVSMDVVAWHDHAFEAIEHGRLDLVL-----------WPNEVPDTLYSETLFED 169 Query: 179 VPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEF 238 + DHP+ L +LR+PH + ++ L ++G R + + F Sbjct: 170 DFVCMMSSDHPSGDGPLVLRDYLRFPHAVVSVLGGKQTIVEQRLHDMGVRRAAGLRVSYF 229 Query: 239 EQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRN 298 ++ A+ + R Y + +V P ++ + ++WH R Sbjct: 230 SGAITAIARTALIA-TVPRRLAMLYRDRANIRIVEAP-------AMFGKLSYKMVWHPRA 281 Query: 299 SHNPKIVWLRETIKNLYASM 318 + + WLR+TI+ + Sbjct: 282 DGDLALQWLRQTIRAAANDI 301 >UniRef50_Q1MWN1 LysR-type regulatory protein n=1 Tax=Sphingomonas sp. A4 RepID=Q1MWN1_9SPHN Length = 302 Score = 224 bits (571), Expect = 5e-57, Method: Composition-based stats. Identities = 69/316 (21%), Positives = 123/316 (38%), Gaps = 21/316 (6%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 I +DLNLL + + Q R V +AA+ + ++ AVS +L KLR +D LFV + G+ P Sbjct: 4 IRDVDLNLLRVFECVFQTRKVVEAAEILGISQPAVSNALKKLRELLNDELFVRTRSGMIP 63 Query: 65 TPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQIYQR 122 T + + + ++ ++ + ++ PR F +A M L I Sbjct: 64 TQYAMQLAEPISYALKTLEIAIEASESFDPRRDKRHFVIATSDLGDMYFGPKLISHIRDI 123 Query: 123 YPQATIKLRNWD-YDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPC 181 TI+ +++ GEVDI R + + LF Sbjct: 124 SQDITIEFVGNSRPHIFESLENGEVDILLGFRPDLITNMFVFR----------LFYQGWR 173 Query: 182 VWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQS 241 + RKDHP + L I + E S + +++ L ++G +R I + F Sbjct: 174 ILARKDHPIFSSKAPREDLLACRWIGVRSEGSGSASVNAELLKVGMDRNIVVWTSNFGTL 233 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 + A D L Y ++ L + P+ + + +WH + ++ Sbjct: 234 APLLAVGD-LAACVPEIYTTVIDEAFGLKSMPFPVDLPKH-------SISSVWHSKAHND 285 Query: 302 PKIVWLRETIKNLYAS 317 P WLR+ + L+ Sbjct: 286 PANQWLRQQVSILFKE 301 >UniRef50_B5JN19 Putative uncharacterized protein n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JN19_9BACT Length = 296 Score = 223 bits (570), Expect = 5e-57, Method: Composition-based stats. Identities = 42/314 (13%), Positives = 100/314 (31%), Gaps = 21/314 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L + +++ E +AA+++N+ A+S + +L LF G+ T Sbjct: 1 MELRQIRSFRVVAAEEHFRRAAEKLNIAQPALSLQVRQLEEELGTQLFERVGRGVRLTDA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHH-QTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + + + + + A+ +RYPQ Sbjct: 61 GSLFWDYADRIVSLVDESAEATREHSDLIRGRLRIGIAQTPNCCFGPAVISAFKRRYPQV 120 Query: 127 TIKLRNWDYDSLD-AITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + L D ++ ++ +GE+D+G + E ++ + Sbjct: 121 FVSLAELAADEIESSLLKGELDLGIGFGPCDSP----------NLSSESIYEERFVALAP 170 Query: 186 KDHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 + HP + +L T + I + + + +L +A+ + E + Sbjct: 171 RGHPWFNKKNISLKTLAQEELILLTRDYCTRRIFEKTCDDLDVSLKVAIEMNTIEGIIAS 230 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 L + + L L ++P+ + L++ K +P Sbjct: 231 LEST-GLASVLPAQIVN--SPLMSPTLRSVPIAQP-----GIRRKVALVYRKSGYLSPAA 282 Query: 305 VWLRETIKNLYASM 318 + K L S+ Sbjct: 283 HAMATEWKTLAKSL 296 >UniRef50_Q393U0 Transcriptional regulator, LysR family n=6 Tax=Burkholderiales RepID=Q393U0_BURS3 Length = 310 Score = 223 bits (570), Expect = 6e-57, Method: Composition-based stats. Identities = 75/319 (23%), Positives = 140/319 (43%), Gaps = 22/319 (6%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 ++ ++DLNLL+ L L+ E+ VT+AA ++ ++ SA+S +L +LR D L + + G+ Sbjct: 1 MNLRSVDLNLLVALDALLTEKHVTRAATKVGLSQSAMSSALGRLRILMRDELLIRNATGM 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQIY 120 PTP + +E+ L + + + LL+ P F L L +++ L Q+ Sbjct: 61 EPTPRALELEEPLRQLLHQAERLLESDGAFDPATTAGHFRLRMSDVLEYLLMPPLLAQLE 120 Query: 121 QRYPQATIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 Q P T+ + + ++ A+ ++D+ S H + + LF D Sbjct: 121 QEAPGVTLDVVHLSPGQTVTALEADDIDVAVSMDLEHAGA----------VQAMPLFDDR 170 Query: 180 PCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFE 239 + +DHP + LD FL PH+ + +D +D L + R R + +++P + Sbjct: 171 MVCVMARDHPCAAEALTLDLFLSLPHLKVSISSTDGRYVDAKLAGMRRARNVVLNVPHWL 230 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 + + + + R + + L L ALP +++ WH+R+ Sbjct: 231 VVPHLLRHSSMVAV-MSARLAERFA-ADGLVLKALPFE-------SAGFHWSMYWHRRHD 281 Query: 300 HNPKIVWLRETIKNLYASM 318 P WLRE I+ M Sbjct: 282 SVPAQAWLREKIREAAEPM 300 >UniRef50_B2JFW9 Transcriptional regulator, LysR family n=39 Tax=Burkholderia RepID=B2JFW9_BURP8 Length = 342 Score = 223 bits (570), Expect = 6e-57, Method: Composition-based stats. Identities = 76/314 (24%), Positives = 125/314 (39%), Gaps = 23/314 (7%) Query: 6 TTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPT 65 +LD+ L+ L+ L+ ERSVT+ A R+N T A+S +L KLR +DP+ V G+ PT Sbjct: 7 ASLDIWLVRVLRTLLVERSVTQTALRLNQTQPAISTALRKLRETLNDPILVRGKSGMVPT 66 Query: 66 PLMVSMEQNLAEWMQMSNLLLDKPHHQTPR--GLKFELAAESPLMMIMLNALSKQIYQRY 123 S+ + ++ + + P F +AA L + + Q + Sbjct: 67 EYGESLLAAAQKVLRDVDFVATPHGDFDPARSRRTFRIAAPDYLNDFFMPTVIAQFRETA 126 Query: 124 PQATIKLRNWDY--DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPC 181 P A +++ + D A+ GE+D+ L + LFSD Sbjct: 127 PHARLEIESLGPLFDHTCALDAGELDLVIGNWPKP----------DLRFERSDLFSDTVV 176 Query: 182 VWLRKDHPALHQTWNLDTFLRYPHISICWEQSDT-WALDNVLQELGRERTIAMSLPEFEQ 240 +R DHP D +L PH++ A+D R I +LP F Sbjct: 177 CMMRADHPLAKAPLTRDAYLAAPHLAPAHYSGARGGAIDTGFARARASRRIVATLPYFGL 236 Query: 241 SLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 + Q D + T R+ +Y + L +V +P+PF + +WH + Sbjct: 237 VPQVLLQSDLIFTTT-RRFALHYAAMLPLAVVDVPIPFPRIKC-------YQMWHPQPDR 288 Query: 301 NPKIVWLRETIKNL 314 I WLR + + Sbjct: 289 PSDIAWLRGLMAQV 302 >UniRef50_B5XYZ1 Transcriptional regulator, LysR family n=5 Tax=Klebsiella RepID=B5XYZ1_KLEP3 Length = 308 Score = 223 bits (569), Expect = 7e-57, Method: Composition-based stats. Identities = 68/312 (21%), Positives = 125/312 (40%), Gaps = 21/312 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 LD L L + +V+ AA +N++ S L KLR F DPLFV + PTP Sbjct: 5 LDFKSLRFFSALYRLGNVSPAADALNISQPTGSLLLKKLRDHFADPLFVRVGQRMMPTPR 64 Query: 68 MVSMEQNLAEWMQMSNL--LLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYP- 124 ++ + +Q+++ + F + M +L L + Q+ Sbjct: 65 ADAIAPTVFTLLQLADNDLAVKPEFLPQQSQRNFTIGMTDISQMTLLPLLQIALQQQAAD 124 Query: 125 QATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 T ++N D +L+A+ G+ D+ L+ LP ++ + LF Sbjct: 125 GITFTIQNLDEQTLNALESGKCDLAIGY----------LTQLPDSVYQQHLFDQSYVCLA 174 Query: 185 RKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 ++HP + + + + H++I E + +D L E R IA++LP F + + Sbjct: 175 AENHPRIRTQLRAEDWRQEKHLAIRVEGTAHGDMDKRLDEHSMPRRIALTLPSFLGTGEL 234 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 A+ D + + + ++ + + LP P + +WH+R +P Sbjct: 235 VAESDMIAV-VPEQVARHITRRYPCRSWPLPFPL-------ARIAIRQVWHQRLHRDPGH 286 Query: 305 VWLRETIKNLYA 316 +WLR I L Sbjct: 287 IWLRSLIAALAD 298 >UniRef50_Q1XGL2 Transcriptional activator NahR n=3 Tax=root RepID=Q1XGL2_PSEPU Length = 374 Score = 223 bits (569), Expect = 7e-57, Method: Composition-based stats. Identities = 68/303 (22%), Positives = 112/303 (36%), Gaps = 21/303 (6%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 + LDLNLL+ L+ +R V+ A+ + +T AVS +L +LR DPLFV + G+ Sbjct: 1 MELRDLDLNLLVVFNQLLVDRRVSITAENLGLTQPAVSNALKRLRTSLQDPLFVRTHQGM 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQIY 120 PTP + + + M L P F LA + + L + Sbjct: 61 EPTPYAAHLAEPVTSAMHALRNALQHHESFDPLTSERTFTLAMTDIGEIYFMPRLMDVLA 120 Query: 121 QRYPQATIK-LRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 + P I +R+ + A+ G VD+ LL +L L + Sbjct: 121 HQAPNCVISTVRDSSMSLMQALQNGTVDLAVG----------LLPNLQTGFFQRRLLQNH 170 Query: 180 PCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFE 239 RKDHP + L+ F Y H+ + + +D + +G R I + +P F Sbjct: 171 YVCLCRKDHPVTREPLTLERFCSYGHVRVIAAGTGHGEVDTYMTRVGIRRDIRLEVPHFA 230 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 + + D L R + L + P+ E+ + WH + Sbjct: 231 AVGHILQRTDLLA-TVPIRLADCCVEPFGLSALPHPVVLP-------EIAINMFWHAKVP 282 Query: 300 HNP 302 P Sbjct: 283 QGP 285 >UniRef50_Q7WCW0 Probable LysR-family transcriptional regulator n=3 Tax=Bordetella RepID=Q7WCW0_BORBR Length = 305 Score = 223 bits (569), Expect = 7e-57, Method: Composition-based stats. Identities = 51/313 (16%), Positives = 107/313 (34%), Gaps = 24/313 (7%) Query: 7 TLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTP 66 + L + RS ++AA+ ++VT A++ + KL A LF + G T Sbjct: 2 NVTFRQLTAFIEVASSRSFSQAAQALHVTQPALTAMIQKLEAQLGVVLFTRTRRGAELTT 61 Query: 67 LMVSMEQNLAEWMQMSNLLLDKPHHQT-PRGLKFELAAESPLMMIMLNALSKQIYQRYPQ 125 + L + ++++ PRG LA L + +L ++ Q YP+ Sbjct: 62 TGRELLPELQRILANLEVVIEDVRGAASPRGGTVTLACIPSLSNTWIPSLIARVEQAYPR 121 Query: 126 ATIKLRNW---DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCV 182 + L++ + + + G++D G +++++L D Sbjct: 122 IKVILKDAMTENRSIHEMLRTGDIDYGVGSPSVEQD----------GLEFDLLAHDELVA 171 Query: 183 WLRKDHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQS 241 + +DHP +T P I + ++ +D G + + + Sbjct: 172 VVPQDHPLARRTLVRWSELAESPLIGMSYQSHVRMLVDEAFAANGISKRPKREVSLITTA 231 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 + M L ++ P + L ++ L ++ P L S + Sbjct: 232 IGMVRA--GLGVSVLPTTAIEVCNVAGLKVLRL-------HAPRVRRPLGFLHLPTRSLS 282 Query: 302 PKIVWLRETIKNL 314 P L +K+ Sbjct: 283 PAARLLLRFVKDA 295 >UniRef50_C4UEX0 Lys-R type regulatory protein n=1 Tax=Yersinia ruckeri ATCC 29473 RepID=C4UEX0_YERRU Length = 299 Score = 223 bits (569), Expect = 8e-57, Method: Composition-based stats. Identities = 73/316 (23%), Positives = 130/316 (41%), Gaps = 21/316 (6%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 S+ +DLNLL+ L +L+ ER V++AAKR+ ++ AVS +L +LR DD L V G Sbjct: 2 NSLRAIDLNLLVILDVLLSERHVSRAAKRLYMSQPAVSHALNRLRYLLDDELLVRVAGGF 61 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKP-HHQTPRGLKFELAAESPLMMIMLNALSKQIYQ 121 T ++ + L E ++ ++ +F +A ++L L +++ Q Sbjct: 62 QLTRRAAALIEPLKEVLEKVRYIIGTGNFEPALATQRFRIALSDYGAAMVLPGLLQRLRQ 121 Query: 122 RYPQATIKLRNWDYDS-LDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 + P + + + ++ + G++D+ + LP + LF + Sbjct: 122 QAPGIDLVVEQASREQMIEQVMAGQLDLALG----------VFPDLPADMTASRLFEEHF 171 Query: 181 CVWLRKDHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFE 239 + + +P + + LD +L PH+ + ++ L ELG R +A +P F Sbjct: 172 VCVIDQANPLARKKYFTLDDYLVQPHLLVSMRGESVGEVETALAELGVRRRVAAIMPHFL 231 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 + A D LLL A R + L + LP F +WH RN Sbjct: 232 LAPQALAGTD-LLLTVASRVVTIQQESMNLQRLTLPFTVPN-------FDFVQIWHNRNH 283 Query: 300 HNPKIVWLRETIKNLY 315 WLR+ + Sbjct: 284 GKEDHRWLRQQVAESC 299 >UniRef50_Q2G901 Transcriptional regulator, LysR family n=2 Tax=Alphaproteobacteria RepID=Q2G901_NOVAD Length = 302 Score = 222 bits (568), Expect = 1e-56, Method: Composition-based stats. Identities = 67/320 (20%), Positives = 130/320 (40%), Gaps = 21/320 (6%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 LDLNLL+ LM+ RSVT+AA+RI +T A S +L +LR +F D + V + Sbjct: 1 MRFKGLDLNLLVVFDALMETRSVTRAAERIGLTQPATSAALRRLRDYFRDEIVVAVGKRM 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTP--RGLKFELAAESPLMMIMLNALSKQIY 120 PTP ++ + + ++ + P P +F + +M+ +L L ++ Sbjct: 61 HPTPFAEALHPQIQQALRRVERAISMPTEFDPSTSTRRFRIIGSDYIMVAVLVPLIERFA 120 Query: 121 QRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 + P I++ + S+ + G D+ + L EVLF + Sbjct: 121 RTAPGVRIEIIQPNEHSVAELEAGRADLLVTPEP----------FLASWHPSEVLFDEEQ 170 Query: 181 CVWLRKDHPALHQTWNLDTFLRYPHISICWE-QSDTWALDNVLQELGRERTIAMSLPEFE 239 V +P + D F H+++ + D+ L +GRER + +++ F Sbjct: 171 VVVGWAQNPIFARGVTADDFYAAGHVTVAFGANRTPAFADSALSRMGRERRVEVTVGSFA 230 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 + + L + R + + L +P F Q+ + +H+ + Sbjct: 231 SAPWFIEGTSRLAV-LHERLVRQIARRFNLAWARMPFDFPTMQEM-------MQFHEARA 282 Query: 300 HNPKIVWLRETIKNLYASMA 319 + + WLR+ ++ + + A Sbjct: 283 EDAGLAWLRQQMREVASENA 302 >UniRef50_Q2BJ61 Transcriptional regulator, LysR family protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BJ61_9GAMM Length = 302 Score = 222 bits (568), Expect = 1e-56, Method: Composition-based stats. Identities = 62/315 (19%), Positives = 127/315 (40%), Gaps = 15/315 (4%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 ++ ++DLNLL+ LQ L+ E+ V+KAA+R+N++ AVS++L +LR DP+ V + G Sbjct: 1 MNLRSVDLNLLVVLQALIDEQHVSKAAERLNMSQPAVSRALQRLRTTLQDPILVRTGSGY 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLD-KPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQ 121 + V + + L+ + ++ + +L +++++ + + + + Sbjct: 61 DLSARAVVLREQLSHVLHEVQAIMQPEQFDPMQAEGVLKLTGLDLELILLMPDVIRMLRE 120 Query: 122 RYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPC 181 + P +++ + + + RG+V +G + Sbjct: 121 KAPNLRVEVVPQLPEHFELLERGDVHFTITGLFPQTH--------HDQYRRIEIARTGHV 172 Query: 182 VWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQS 241 + +D+P +L + H + +D+ L E G +R + + L F Sbjct: 173 CVMDRDNPLAKGELSLQDYANASHGLVSITGKGPGMMDDALGEFGYKRKVMLRLANFMSV 232 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 Q D L+ + Q L L LP F EV + WH R H+ Sbjct: 233 AQFCQQSD-LIFTLPKIMATHLAQGTSLVLRPLPKEFALP-----EVVLYMYWHDRYHHD 286 Query: 302 PKIVWLRETIKNLYA 316 P W+R + +++ Sbjct: 287 PMCSWVRAELAEIFS 301 >UniRef50_C9PC13 Transcriptional regulator LysR family n=1 Tax=Vibrio furnissii CIP 102972 RepID=C9PC13_VIBFU Length = 310 Score = 222 bits (567), Expect = 1e-56, Method: Composition-based stats. Identities = 77/321 (23%), Positives = 139/321 (43%), Gaps = 22/321 (6%) Query: 1 MKKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPL 60 MKK +DLNL+ + + +SV A R+N++ SA S SLA+LR+ +D LF+ Sbjct: 1 MKK-FDNIDLNLMKVFYYVYETQSVQMTADRLNISQSACSHSLARLRSRLNDELFIRING 59 Query: 61 GLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGL--KFELAAESPLMMIMLNALSKQ 118 + PT + Q++ +++ L+ P F ++ ++ L+ Sbjct: 60 KMIPTNQAEQLAQSIQPALELLYSGLNTATPFDPAVGQHHFVISGYDFSAWCVMPTLTAY 119 Query: 119 IYQRYPQATIKLRNWDYDS-LDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFS 177 + + +P T++L D + + GE+D+ +S + +++ S Sbjct: 120 LAEHFPNITVRLVQSDKQIPTEHLESGEIDLSLGFDHEAEQSNHIGNAI--------WQS 171 Query: 178 DVPCVWLRKDHPA--LHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSL 235 C+ + H A + +LDTFL YPH+ + +D L +L ++R +A++L Sbjct: 172 GQYCIAMDNQHDALMAGRPLDLDTFLAYPHVLVTPWNEPRGIVDATLGKLNKKRQVAVTL 231 Query: 236 PEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWH 295 P + F+ + L A Y + QL VA P+P + L WH Sbjct: 232 PSVLSAPFLLKGTNYFLAA-PESYLETLADTLQLAFVAPPIPIP-------QYHIKLYWH 283 Query: 296 KRNSHNPKIVWLRETIKNLYA 316 K +PK+ WL + +L A Sbjct: 284 KVREKDPKVNWLIHRLCDLAA 304 >UniRef50_A7ZAS3 YybE n=1 Tax=Bacillus amyloliquefaciens FZB42 RepID=A7ZAS3_BACA2 Length = 296 Score = 222 bits (567), Expect = 1e-56, Method: Composition-based stats. Identities = 45/308 (14%), Positives = 103/308 (33%), Gaps = 24/308 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +D + + Q + Q + +T+AAK+++++ A+S+S++KL LF + Sbjct: 1 MDWHQINYFQTVAQVQHITQAAKQLSISQPALSRSISKLEDELGVQLFDRKGRNIYLNRY 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKP-HHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + ++ + + + P L+ L M M+ + YP Sbjct: 61 GKMFLHRVEQSIRQIEIGKQEVWNEIHPNSGTILLSFLPSLGMSMVPDVISSFQHMYPHV 120 Query: 127 TIKLRNWDYDS-LDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 +L ++ +T EVDI + L + + L ++ + + Sbjct: 121 NFQLTQASNQQIIEQLTSREVDIALTS----------LRDENDDVICQPLLTEELYLAVS 170 Query: 186 KDHPALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 +HP +L P IS + + ++ G + + + + Sbjct: 171 AEHPLASYDEIDLKMAEHEPFISFKDTNVLHGMIKELCEKAGFSPDVVFEGEDIVTASGL 230 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 L ++ P + ++ L+++ E L W K +P Sbjct: 231 VGAK--LGVSLIPDL--HVFDKTKVKLLSV-------TNPICEREIGLAWRKDGYLSPAA 279 Query: 305 VWLRETIK 312 I+ Sbjct: 280 ENFIAFIQ 287 >UniRef50_B5CN01 Putative uncharacterized protein n=2 Tax=Bacteria RepID=B5CN01_9FIRM Length = 297 Score = 222 bits (567), Expect = 1e-56, Method: Composition-based stats. Identities = 56/309 (18%), Positives = 111/309 (35%), Gaps = 25/309 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L L ++R TKAA+++N+T ++S ++++L LF +S T Sbjct: 1 MNLYQLRYFLELAEKRQYTKAARQLNITQPSLSYAISQLENELGVKLFEKDGRTISLTDC 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQ-- 125 + +E + + + + + K L L + L+ + ++ P Sbjct: 61 GRDLAGCASESLAILDKGIANLKRKAAGAGKIRLGFLRTLGTDYIPDLASRYLKQNPDKE 120 Query: 126 ATIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 T + L+++ GE DI FS Y + + + Sbjct: 121 TTFRFHTGSTGALLESLNAGEYDIVFSSEPPE----------SNDFHYTPVMKQDLVLIV 170 Query: 185 RKDHPALHQ-TWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 HP Q L L YP+I + D + +++G++ I E + Sbjct: 171 PDGHPLADQYRIPLSETLAYPYIYFDQSAGLRYVTDLLFEQIGQKPEIVYETDEDQVIAG 230 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 + A +A P Y L +L + L + + E Q ++ +R+ +P Sbjct: 231 LVAH--GFGIALVP----YMELLLRLNVRILQISYPECQ-----RDIYMVTSRRHELSPA 279 Query: 304 IVWLRETIK 312 RE + Sbjct: 280 AHHFREFVL 288 >UniRef50_A4FE82 LysR-family transcriptional regulator n=5 Tax=Actinomycetales RepID=A4FE82_SACEN Length = 294 Score = 222 bits (567), Expect = 1e-56, Method: Composition-based stats. Identities = 50/313 (15%), Positives = 103/313 (32%), Gaps = 25/313 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L + +E T+AAKR++V S +S S+ L LF + ++ T Sbjct: 1 MELRQLEYFVAVAEECHFTRAAKRLHVAQSGLSASIRSLERELGARLFHRTTRNVTLTAA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTP-RGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 ++ + + D + + L ++ L + +P Sbjct: 61 GHALLHEARRALCAVDSARDAVAAVRGLLRGELSIGTLQCLHVVDLPPVLAGFVTAHPGI 120 Query: 127 TIKLRN-WDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 ++LR D + + G +D+ F+ R + P + L ++ + Sbjct: 121 EVRLRQGGSGDLAEQVRAGRLDLAFAVRP---------ARCPDGVLVHSLDTEPLVLACA 171 Query: 186 KDHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 DHP + P + + +D VL E G ER +A+ + + L + Sbjct: 172 GDHPMAERDRVDPRELGEQPFVDFHPDWGTRDVVDRVLAETGVERRVALEVTDVHSLLEL 231 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 A L +A PR + +PL + + + + + Sbjct: 232 VAC--GLGIALVPRSF----SAKNGQVRFVPLASPAPTWETVAIT-------SDPTSTAA 278 Query: 305 VWLRETIKNLYAS 317 L ++ Sbjct: 279 AALLRDVQEASRR 291 >UniRef50_C1F7X5 Transcriptional regulator, LysR family n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F7X5_ACIC5 Length = 305 Score = 222 bits (566), Expect = 2e-56, Method: Composition-based stats. Identities = 51/311 (16%), Positives = 113/311 (36%), Gaps = 22/311 (7%) Query: 9 DLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLM 68 +L + + Q + T+AA+ ++V+ SA++ + +L LF + ++ T Sbjct: 4 ELRHIRAFLAVAQHANFTRAAQELHVSQSALTVQIQQLEEALGVKLFDRNKRRVALTDAG 63 Query: 69 VSMEQNLAEWMQMSNLLLDKPHHQTP-RGLKFELAAESPLMMIMLNALSKQIYQRYPQAT 127 + L + + ++ + T R +A + +L+ + +P Sbjct: 64 REVIAPLQRIVVDAEAIVSRTREITGLRRGVLSMAVLPSMASGILSTALSRFTAAHPGIM 123 Query: 128 IKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRK 186 I + + D + + + + EVD G + + + LF+D +L + Sbjct: 124 IHIHDVVADQVIEKVKKEEVDFGVAT----------VMHADKELTLMPLFTDRLFAFLPE 173 Query: 187 DHPA-LHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMA 245 HP + +L YP + + S +D L++ G T A +L + Sbjct: 174 QHPLSSRASVSLQQISDYPLVLMARGTSVRSMVDQALRDHGLTATAAYEANYMSTALSLV 233 Query: 246 AQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIV 305 + + P L VALP+ + P +L K S +P + Sbjct: 234 RAGFGIGI--LPEDAGTMGSAQNL--VALPIVRPQLT-----RPIHVLMRKGRSASPAVQ 284 Query: 306 WLRETIKNLYA 316 + + ++++ Sbjct: 285 QMLQILRDITR 295 >UniRef50_A0QNN2 Transcriptional regulator, LysR family protein n=3 Tax=Corynebacterineae RepID=A0QNN2_MYCS2 Length = 293 Score = 222 bits (566), Expect = 2e-56, Method: Composition-based stats. Identities = 42/310 (13%), Positives = 87/310 (28%), Gaps = 25/310 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 + L+ L +L + VT AA + ++ +S++LA+L PLF L Sbjct: 1 MHLDELSWFVVLAETEHVTDAAAELGISQPTLSRALARLEDEVGVPLFDRVNRRLQLNAY 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQ-TPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + ++ + ++ P LA + L ++ P Sbjct: 61 GEILLEHARRTITEMRSATERIAAMRDPDTGLVRLAFLHSQAGSFVPDLLRRFRAHAPHV 120 Query: 127 TIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 L +D L+ + G+VD+ + P + L+ + C+ + Sbjct: 121 QFSLTQGAAHDLLERLAGGQVDLAITS------------PRPEGFQWRGLYVERLCLAVP 168 Query: 186 KDHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 + H L P + + + + E G + E + Sbjct: 169 RGHRLASRSRITLADAGDEPFVGLAPGFGLRQLTEELCAEAGITPHVVFEATEIPTMEGL 228 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 A + + P + + L Q + L W P Sbjct: 229 VAAGFGVAVVPVPHAGRAEPGAEYIAL----------AQASAKRQLGLAWPADRPLPPAA 278 Query: 305 VWLRETIKNL 314 + + Sbjct: 279 ERFAQFVIRT 288 >UniRef50_C6C982 Transcriptional regulator, LysR family n=1 Tax=Dickeya dadantii Ech703 RepID=C6C982_DICDC Length = 298 Score = 222 bits (566), Expect = 2e-56, Method: Composition-based stats. Identities = 45/318 (14%), Positives = 100/318 (31%), Gaps = 23/318 (7%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 +I+ + L L + + ++A +++T SA+S S+ L LF + + Sbjct: 1 MNISNISLRQLRIFLAVAEHHGFSRAGNMMSLTQSAMSHSIGDLENELGIRLFERTTREV 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLL-DKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQ 121 T + + L + L + R +A + ++ QI + Sbjct: 61 LLTQEGAELSEALRRVLGELETTLCNTQSRAERRRGLVHVATSPTISAGIMPDCIAQIAE 120 Query: 122 RYPQATIKLRN-WDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 YPQ + + + ++ + GEVD G S+P + E + Sbjct: 121 NYPQVNLIIHDRVQQQAMQMVLNGEVDFGVIIEP----------SVPSDLYTETFMEEPF 170 Query: 181 CVWLRKDHPALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFE 239 C+ L ++H + + + + +DN L G + L Sbjct: 171 CLVLPENHQIARLKQVTWHDLQNQEMVLLDYASGSRPLIDNALIRHGVTPHVIQELGHVT 230 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 + + ++ P+ + L + L L+ + +S Sbjct: 231 TIFRILQS--GIGVSVIPQLALSSLECSGLAVRQL--------WPIENRRLQLVRRRNHS 280 Query: 300 HNPKIVWLRETIKNLYAS 317 + + I+ L + Sbjct: 281 LSTAATAIWTLIQTLCQA 298 >UniRef50_A9WGB3 LysR substrate-binding n=2 Tax=Chloroflexus RepID=A9WGB3_CHLAA Length = 304 Score = 222 bits (566), Expect = 2e-56, Method: Composition-based stats. Identities = 42/312 (13%), Positives = 88/312 (28%), Gaps = 24/312 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L + +E +T+AA+++ ++ A+S+ + L LF + T Sbjct: 1 MELRQLRYFLAVAEEGHITRAAEKLYISQPALSQQIKLLEEEIGTVLFDRIGRRIRLTAA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + +Q + + + ++ L YP Sbjct: 61 GEILVAHARRALQELSEAQVAIDELNGLQRGMLRIGVVQTVNAYLMPDLVAAFTNAYPAI 120 Query: 127 TIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 ++++ D + G++ IG + E LFS+ V + Sbjct: 121 SLQIEELATRDIEQRLADGDLQIGIGFVPPETA----------GVTGEELFSEDLVVVVS 170 Query: 186 KDHPALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 + HP + + + P I + D G + + + + L Sbjct: 171 RQHPWADLPQLPVQSLHQQPLILLSTTFCTRRLWDRCTHIAGIQPRVQIEMNTIGSILAA 230 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 Q L P Q LV +PL + LL+ Sbjct: 231 VRQLT--LATVLPAMVL----SGQPDLVGIPLVDPTPR-----RTVGLLFRHNAYRCAAT 279 Query: 305 VWLRETIKNLYA 316 + Sbjct: 280 RAFVAMTRAKLR 291 >UniRef50_C7I3E5 Transcriptional regulator, LysR family n=1 Tax=Thiomonas intermedia K12 RepID=C7I3E5_THIIN Length = 301 Score = 222 bits (566), Expect = 2e-56, Method: Composition-based stats. Identities = 36/274 (13%), Positives = 86/274 (31%), Gaps = 20/274 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L + ++ S ++AA+R++++ +S + L L S G++ T Sbjct: 1 MELRQLRYFVTIAEQGSFSRAAERLHISQPPLSTQIKALEDEIGARLLERSNRGVTLTAA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQ-TPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + +++ + +++ + S +L K RYPQ Sbjct: 61 GAAFFEDIRSVLAQLEHAVERVRQAERGDAGTLSIGFVSIADFGILPPTLKSFRARYPQV 120 Query: 127 TIKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 ++L D + + E+D+ + + L + + Sbjct: 121 DVQLHELTTDAQIRELRAAELDLSIGLAPVDEP----------GLTFTPLLQEPLMLAAP 170 Query: 186 KDHPALHQ---TWNLDTFLRYPHISICW--EQSDTWALDNVLQELGRERTIAMSLPEFEQ 240 HP L + +L + P I ++ Q G I + + Sbjct: 171 TTHPVLQEGSGAVDLRALAKEPFIVPPRNIGPGLYDLTLSLCQAAGFAPRITQHARQMQT 230 Query: 241 SLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVAL 274 + + + +A P + + + L Sbjct: 231 VIGLV--SCGMGVALVPASLRQL-KRPGVQYRPL 261 >UniRef50_Q15TE0 Transcriptional regulator, LysR family n=4 Tax=Alteromonadales RepID=Q15TE0_PSEA6 Length = 307 Score = 222 bits (566), Expect = 2e-56, Method: Composition-based stats. Identities = 68/321 (21%), Positives = 127/321 (39%), Gaps = 22/321 (6%) Query: 1 MKKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPL 60 M + +DLNL L L + QE S+T A KR++++ AVS +L++LR + DPLFV Sbjct: 1 MNMLHSKIDLNLFLILVAVYQEGSITGAGKRLHLSQPAVSHALSRLRDKYQDPLFVRHGR 60 Query: 61 GLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQT--PRGLKFELAAESPLMMIMLNALSKQ 118 + T L ++ + + L + + L I L+ Sbjct: 61 KMIATQLCQTIMPRVLSSVAELESTLHDIGDFDVHQYQREMKFGFRDILESIFFPELATD 120 Query: 119 IYQRYPQATIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFS 177 + P T+ R D A+ +DI ++L+ I + ++ Sbjct: 121 LMANTPNITVHSRQVSRLDMEAALESQALDIVI----------DVLTPTSNDIHHTLICD 170 Query: 178 DVPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPE 237 + + RK HP L +L +++ H + ++ S +D L + R A+ Sbjct: 171 EHFSLICRKGHPILSD-MSLANYIKAEHALVTFKDSAVNTVDMALAKHAVARKFALKCEH 229 Query: 238 FEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKR 297 + + + ++ D LL Y + Q + +V LP +P + WHK+ Sbjct: 230 YFAATSVISRCDMLL-TMPNAYARLLKQQMPVEVVPLPFEVPI-------LPVHMYWHKQ 281 Query: 298 NSHNPKIVWLRETIKNLYASM 318 H+P W+R+ + + + Sbjct: 282 AEHDPLNSWMRQKLLAIAKRV 302 >UniRef50_A4ISN4 Transcriptional regulator LysR family n=6 Tax=Geobacillus RepID=A4ISN4_GEOTN Length = 305 Score = 221 bits (565), Expect = 2e-56, Method: Composition-based stats. Identities = 39/271 (14%), Positives = 90/271 (33%), Gaps = 17/271 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +D+ L + +E +TKAA+++++ +S+ L +L PLF + T Sbjct: 2 IDVKQLKYFVTIAEEGQITKAAQKLHIAQPPLSQQLKQLEEKLGVPLFDRKAKKMELTAP 61 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQT-PRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + + + + + + L +Q ++++P Sbjct: 62 GKLFYEKAKQLLHQLDDAIAEVKEIETGATGTLAVGCVKS-CFSYLAQTIRQFHEQFPNV 120 Query: 127 TIKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 T LR D S+ + +DIG +++ L SD L Sbjct: 121 TFHLREGDTFSICQLLQERHIDIGIVRLPIDSSHYDIIP----------LPSDRYVAVLP 170 Query: 186 KDHPALHQTWNLDTFLRYPHISICW--EQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 + + ++ F +P + + + + G E + P+ L Sbjct: 171 EHWALSRSSLSMRDFAEWPLLLLHRVHGAGQYERVVEECRRHGFEPNVLCECPDATILLS 230 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVAL 274 + AQ + P+ +L + ++ + Sbjct: 231 LVAQ--GMGATIVPQSTVSLFRLPGIRVLPI 259 >UniRef50_A1U8Q8 Transcriptional regulator, LysR family n=1 Tax=Marinobacter aquaeolei VT8 RepID=A1U8Q8_MARAV Length = 312 Score = 221 bits (565), Expect = 2e-56, Method: Composition-based stats. Identities = 74/317 (23%), Positives = 130/317 (41%), Gaps = 26/317 (8%) Query: 7 TLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTP 66 DLNLL L E++VT+A +R++++ +VS +L +LR F DPLF+ + PT Sbjct: 4 NYDLNLLRTFHALYLEQNVTRAGERLHLSQPSVSAALGRLRELFKDPLFIRDRQRMRPTE 63 Query: 67 LMVSMEQNLAEWMQMSNLLLDKPHHQTPR--GLKFELAAESPLMMIMLNALSKQIYQRYP 124 + + + + L+ +P FE+AA +++L AL+ + ++ P Sbjct: 64 TADHLFPVIEAALTDLDGLITSERDFSPATEQRHFEIAANDYFEVLILPALASVLREQAP 123 Query: 125 QATIKLRNWDYDSLDA-ITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVW 183 T+++R D +A I G D+ F + P + + + Sbjct: 124 GITLQVRRLSQDMSEAGIMSGTTDLAFGRQVDP----------PDNLVVREVILEGIECL 173 Query: 184 LRKDHPALHQ-----TWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEF 238 + +HP L + D F RY H+ I + L+ +R +A+++ F Sbjct: 174 VGNEHPLLERLKGNGQMTRDDFERYAHVLIQPHTRLKSGIFKQLESQNLKRKVALAVTYF 233 Query: 239 EQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRN 298 + + + CQ++ + + VA P+ FD PF L WH R Sbjct: 234 MAVPALLEGSSLIA-SLPTGLCQHFRRQFAVTPVAPPVAFDA-------FPFHLSWHHRY 285 Query: 299 SHNPKIVWLRETIKNLY 315 +P WLRE I Sbjct: 286 QKDPAHRWLREQIIACC 302 >UniRef50_Q2BMZ3 Putative transcriptional regulator, LysR family protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BMZ3_9GAMM Length = 303 Score = 221 bits (565), Expect = 2e-56, Method: Composition-based stats. Identities = 55/300 (18%), Positives = 115/300 (38%), Gaps = 18/300 (6%) Query: 18 LLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSMEQNLAE 77 ++++ER VT+AA+R+++T SA+S+ L++LR F DPL + + + + Sbjct: 14 VMLEERHVTRAAERLHLTQSALSRQLSQLREHFSDPLLIREGNEYLLSARAKQLLPKIQA 73 Query: 78 WMQMSNLLLD-KPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQATIKLRNWDYD 136 + + L + +F A + + + ++ P I W + Sbjct: 74 ILTEVDELSEGDSFDPLQCRRRFSFACTDHVAQFIFPEILGRLRDEAPGIDITFEMWRPE 133 Query: 137 SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPALHQTWN 196 L + + +DI ++LP + + D P + ++HP + Sbjct: 134 WLGRLGQLPLDIA----------STTTANLPENVRSIHIGQDSPVCLMAENHPLAACELS 183 Query: 197 LDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQPDNLLLATA 256 ++ L YP + + D L+ +G +R I +P F + L++ Sbjct: 184 IEKMLEYPFLRLNSGGDKDSFFDKALESMGLQRRIQYEVPFFSAAFQALEGSSLLMI-LP 242 Query: 257 PRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWLRETIKNLYA 316 + L + LPL + + + + WH+ + +P WLR+ I + Sbjct: 243 HHIAMNALEHFPLAVAQLPLA------EVPKNQYHMCWHEVHDQDPAHSWLRQLIAEVLR 296 >UniRef50_C7RKX8 Transcriptional regulator, LysR family n=20 Tax=Proteobacteria RepID=C7RKX8_9PROT Length = 310 Score = 221 bits (565), Expect = 2e-56, Method: Composition-based stats. Identities = 72/315 (22%), Positives = 126/315 (40%), Gaps = 21/315 (6%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 ++T DLNLL+ L +L+ E SV +AA+R+ ++PSA+S++LA+LRA DPL V + GL P Sbjct: 1 MSTADLNLLVTLDVLLAEGSVARAAQRLRLSPSAMSRALARLRATTGDPLLVRAGRGLVP 60 Query: 65 TPLMVSMEQNLAEWMQMSNLLLDKPH--HQTPRGLKFELAAESPLMMIMLNALSKQIYQR 122 TP + + + + +Q + L + L + L ++ ++ Sbjct: 61 TPRALELREQVGPLVQAAEAALRPVEKLDLERLVRMYTLRTSEGFVENFGPDLIARVAEQ 120 Query: 123 YPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCV 182 P + + + G VD+ + + + + + LF D Sbjct: 121 APGVRLCFVQKSNKNSAPLRDGSVDL---------ETGVVGKATAPELRVQALFRDRFIG 171 Query: 183 WLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 +R HP + HI + D +D L+ LG ER I + F +L Sbjct: 172 VVRMGHPLSQGEMTPHRYATGKHILVSRRGFDRGMIDEALKPLGLERQIVTIVSGFSTAL 231 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 +A D + + +H LP+ E+ +L WH R +P Sbjct: 232 VLARASDLIASVPERHTAKLRAGMHS---FPLPIATP-------EITVSLHWHPRMDADP 281 Query: 303 KIVWLRETIKNLYAS 317 WLR ++ + Sbjct: 282 AHRWLRGCVREVCGE 296 >UniRef50_D1TCI7 LysR family transcriptional regulator n=2 Tax=Burkholderia RepID=D1TCI7_9BURK Length = 329 Score = 221 bits (565), Expect = 2e-56, Method: Composition-based stats. Identities = 63/320 (19%), Positives = 125/320 (39%), Gaps = 22/320 (6%) Query: 2 KKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLG 61 + DLNLL+ + L++ERSVT+AA+R+ + AVS +L +LR F D LFV +P G Sbjct: 19 ENDFRRFDLNLLVTFRALLEERSVTRAAQRLLLGQPAVSGALKRLRETFGDELFVRTPQG 78 Query: 62 LSPTPLMVSMEQNLAEWMQMSNLLLDK--PHHQTPRGLKFELAAESPLMMIMLNALSKQI 119 ++PTP + + + + ++Q + L + F + L ++++ + ++ Sbjct: 79 MTPTPRALELARQIEPFLQSLHQALTQPSVFDPASAQRVFRIGLSDSLELLLMPEIMARL 138 Query: 120 YQRYPQATIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSD 178 P + R+ + + G +++ + L+ LFS Sbjct: 139 AAAAPGVKLIARSTDSTRAAAMLDDGAIELAVGVFRECVPWQRLMP----------LFSW 188 Query: 179 VPCVWLRKDHPALHQ-TWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPE 237 + ++D FLR+ H+ + +D L+ G R + S Sbjct: 189 RFVSVYNPQLVRTRRKHLSMDEFLRHRHVLTSFSAELRGFIDERLELQGLNREVVFSSSN 248 Query: 238 FEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKR 297 F S F+ + + + + L L LP +L+W Sbjct: 249 FATSPFIVQRTAAIA-TVPEFIGRVWRDTLGLALSPLPFEVP-------GYEVSLMWAAA 300 Query: 298 NSHNPKIVWLRETIKNLYAS 317 + +P + WL+ + + + Sbjct: 301 HDQDPALAWLKREFADAFGT 320 >UniRef50_Q122V6 Transcriptional regulator, LysR family n=3 Tax=Comamonadaceae RepID=Q122V6_POLSJ Length = 307 Score = 221 bits (565), Expect = 2e-56, Method: Composition-based stats. Identities = 52/318 (16%), Positives = 102/318 (32%), Gaps = 23/318 (7%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 + DL L + + S AA+ IN++ A+S+ + KL LF + + Sbjct: 1 MARINFDLQQLQGFVAVAERGSFRAAAEHINLSSPALSRRIDKLETILGARLFNRTTREV 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNALSKQIYQ 121 TPL + + + + +A + L + Q Sbjct: 61 ELTPLGRVFLERARTALDDLESAMLGIADIATHRGGRVTVACVPSAALYFLPTVVSNFSQ 120 Query: 122 RYPQATIKLRNWD-YDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 YP +++ + L ++ GE D G +++L I +E + +D Sbjct: 121 HYPGIRVRVVDETMNQVLQSVLSGESDFGIGF----------MNTLVPEIAFESIHNDPF 170 Query: 181 CVWLRKDHPALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFE 239 + +R++HP ++ N + I++ + LD+ L + G + A + Sbjct: 171 VLAMRREHPLARHKSVNWADVEKESLIAVARSSGNRQLLDDSLTKAGLNPSFAFEVSHVA 230 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 L M L + L LPL Q + LL Sbjct: 231 TLLGMVEAGLGLAAVPRMALASTHATLVGLPLR----------QPQTVRRVGLLTRHGVK 280 Query: 300 HNPKIVWLRETIKNLYAS 317 P + ++ + Sbjct: 281 LRPAAEMFHQHLRRALKT 298 >UniRef50_P27111 HTH-type transcriptional regulator cynR n=108 Tax=cellular organisms RepID=CYNR_ECOLI Length = 299 Score = 221 bits (565), Expect = 2e-56, Method: Composition-based stats. Identities = 51/312 (16%), Positives = 99/312 (31%), Gaps = 24/312 (7%) Query: 11 NLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVS 70 + + + S T+AA ++V+ A+S+ + +L PLF S + T Sbjct: 4 RHINYFLAVAEHGSFTRAASALHVSQPALSQQIRQLEESLGVPLFDRSGRTIRLTDAGEV 63 Query: 71 MEQNLAEWMQMSNLLLDKPHH-QTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQATIK 129 Q + +Q H +A + L Y RYP T++ Sbjct: 64 WRQYASRALQELGAGKRAIHDVADLTRGSLRIAVTPTFTSYFIGPLMADFYARYPSITLQ 123 Query: 130 LRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDH 188 L+ + D + R E+D+G + H ++ L ++ + + + H Sbjct: 124 LQEMSQEKIEDMLCRDELDVGIAFAPVHSP----------ELEAIPLLTESLALVVAQHH 173 Query: 189 PAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQ 247 P H+ L + + E + +D+ ++ G + + L + + Sbjct: 174 PLAVHEQVALSRLHDEKLVLLSAEFATREQIDHYCEKAGLHPQVVIEANSISAVLELIRR 233 Query: 248 PDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWL 307 L P Q L ++L P LE LL K + Sbjct: 234 TS--LSTLLP--AAIATQHDGLKAISLAPPL-------LERTAVLLRRKNSWQTAAAKAF 282 Query: 308 RETIKNLYASMA 319 + A + Sbjct: 283 LHMALDKCAVVG 294 >UniRef50_C4ZHT7 Transcription activator of glutamate synthase(LysR family) n=6 Tax=Clostridiales RepID=C4ZHT7_EUBR3 Length = 293 Score = 221 bits (564), Expect = 3e-56, Method: Composition-based stats. Identities = 51/311 (16%), Positives = 108/311 (34%), Gaps = 26/311 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L+ L ++L QE T+AA+ +++T ++S ++++L LF + T Sbjct: 1 MNLSQLQYFKVLAQEEHYTRAAQMLSITQPSLSHAISQLEQELGTRLFEKKGRNVVLTRY 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + E +++ N + + LA + L ++ YP Sbjct: 61 GKMFLPYVEESLKVLNEGVQRIQEVNGSRHGIIHLAYIYTMGSEFAPKLVRKFLDAYPDY 120 Query: 127 TIKLR---NWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVW 183 I+ + +D + + DI FS + ID++ + + + Sbjct: 121 DIEFHFTVGTTGEIIDGLKDDKYDIVFSSYKDGE----------QDIDFKKIANQKLVLA 170 Query: 184 LRKDHPA-LHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 + DHP + + +L + YP I +D + +E+G+ +A + E Sbjct: 171 VPMDHPLSIKDSVDLRDTIEYPQIYFEKGSGLRPVIDQMFEEIGQFPKVAFEMEEDSSMA 230 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 + AQ +A P L +L + + E L K+ +P Sbjct: 231 GLVAQ--GFGIAVMPDI---------PILRSLSVKTLDIYNPPYERAVYLATLKQRYLSP 279 Query: 303 KIVWLRETIKN 313 + Sbjct: 280 VAKAFIRFVIE 290 >UniRef50_Q8YZV2 Transcriptional regulator n=2 Tax=Nostocaceae RepID=Q8YZV2_ANASP Length = 305 Score = 221 bits (564), Expect = 3e-56, Method: Composition-based stats. Identities = 69/319 (21%), Positives = 134/319 (42%), Gaps = 22/319 (6%) Query: 4 SITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLS 63 ++++DLNLL+ ++L +ERSVT AA+R+ + A+S +LA+LR F D LF+ + Sbjct: 5 DLSSIDLNLLVTFEVLFEERSVTAAAQRLYLGQPAMSAALARLRILFQDELFIRIGREMQ 64 Query: 64 PTPLMVSMEQNLAEWMQMSNLLLDKPHHQTP--RGLKFELAAESPLMMIMLNALSKQIYQ 121 PT + + ++ +Q L+ P F + + ++L L + Q Sbjct: 65 PTAKALEISPGISVALQQIRQTLESSQTFDPTTSKHTFAIGSSDYTSYVVLPKLLEVCRQ 124 Query: 122 RYPQATIKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 P +L ++ DS+ D + + E+ + L + P LF + Sbjct: 125 VAPSIDFRLIGFEKDSVGDLLEQREIHVALG----------LFQNPPRQTRQMPLFEEHF 174 Query: 181 CVWLRKDHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFE 239 R+ HP + ++ +TF R P + D +D VL + +R + ++ P Sbjct: 175 VGLCRRGHPVVTQESMTPETFARLPQALFTLRRDDIGEIDKVLAQYNLQRRVVLTTPHLL 234 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 + + D + + R + L + LP+ K ++LW K Sbjct: 235 ILPTVISSSDLVTV-IPSRLLTPFAYKDTLEIFELPV-------KTEPWMISMLWSKLTD 286 Query: 300 HNPKIVWLRETIKNLYASM 318 + +WLR+ +K++ + Sbjct: 287 QDQASIWLRQMLKSVCEGI 305 >UniRef50_Q47141 Hca operon transcriptional activator n=46 Tax=Gammaproteobacteria RepID=HCAR_ECOLI Length = 296 Score = 221 bits (564), Expect = 3e-56, Method: Composition-based stats. Identities = 49/315 (15%), Positives = 100/315 (31%), Gaps = 25/315 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L + Q + T+AA++++ + ++S + L PL V ++ T Sbjct: 1 MELRHLRYFVAVAQALNFTRAAEKLHTSQPSLSSQIRDLENCVGVPLLVRDKRKVALTAA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQAT 127 Q+ ++ + + + + + +L + R P Sbjct: 61 GECFLQDALAILEQAENAKLRARKIVQEDRQLTIGFVPSAEVNLLPKVLPMFRLRQPDTL 120 Query: 128 IKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRK 186 I+L + + I RGE+D+G + IDY LF + V L Sbjct: 121 IELVSLITTQQEEKIRRGELDVGLMRHPVYSP----------EIDYLELFDEPLVVVLPV 170 Query: 187 DHPALHQ-TWNLDTFLRYPHISICW--EQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 DHP H+ +S S + + + I ++ Sbjct: 171 DHPLAHEKEITAAQLDGVNFVSTDPVYSGSLAPIVKAWFAQENSQPNIVQVATNILVTMN 230 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 + L + P Y +N +V P+ + + W K+ P Sbjct: 231 LV--GMGLGVTLIPGYMNNFNTG---QVVFRPIA-----GNVPSIALLMAW-KKGEMKPA 279 Query: 304 IVWLRETIKNLYASM 318 + ++ AS+ Sbjct: 280 LRDFIAIVQERLASV 294 >UniRef50_C0ZNV8 Putative LysR family transcriptional regulator n=1 Tax=Rhodococcus erythropolis PR4 RepID=C0ZNV8_RHOE4 Length = 298 Score = 221 bits (564), Expect = 3e-56, Method: Composition-based stats. Identities = 73/317 (23%), Positives = 122/317 (38%), Gaps = 24/317 (7%) Query: 1 MKKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPL 60 M +DLNLL L+ E SVT AA+R+N++ A S++L +LR DDP+FV + Sbjct: 1 MAMD---MDLNLLRVFDALVAEGSVTGAAERLNLSIPATSRALGRLRRAMDDPIFVRAGR 57 Query: 61 GLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPR--GLKFELAAESPLMMIMLNALSKQ 118 GL PTP + + ++ + LL + P F + + AL ++ Sbjct: 58 GLVPTPFALRAAPQVRSLLEGAQGLLIDRKNFEPAELERTFVIRINEGTAASLTPALVRR 117 Query: 119 IYQRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSD 178 P A I+ + +D++ G +D+ + E+L+ + Sbjct: 118 FAAEAPNAVIRCVGEGNEDVDSLRNGSIDLDIGADPLPSS----------DVCSEILYRE 167 Query: 179 VPCVWLRKDHPALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPE 237 + K P L +PH+S +D+ L +G R + + Sbjct: 168 GHVGLVSKSSPLARTAQPTLAQLCEHPHVSTSRRGRTHGPIDDALSAVGMRRRVIAVVAS 227 Query: 238 FEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKR 297 + MAA D + L R +Y+ + A+P V WH R Sbjct: 228 PVAAALMAADSDLVAL-VPERLARYFAARLDVAWFAVPTELPA-------VTIHQQWHGR 279 Query: 298 NSHNPKIVWLRETIKNL 314 H+P WLRE ++ Sbjct: 280 LDHDPAHKWLREQVREA 296 >UniRef50_A1SY80 Transcriptional regulator, LysR family n=1 Tax=Psychromonas ingrahamii 37 RepID=A1SY80_PSYIN Length = 294 Score = 220 bits (563), Expect = 3e-56, Method: Composition-based stats. Identities = 45/313 (14%), Positives = 89/313 (28%), Gaps = 25/313 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +D L +L Q + TKAA+ + + SA+S S+ KL L + +S T Sbjct: 1 MDFKRLYYFTVLAQTGNFTKAAEELGIAQSALSMSIQKLEKQLALKLINRAERKMSITSD 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + ++ + + + L + + L QRYP Sbjct: 61 GQVLLKHAQKILDNVKQAKIQLQELKGLESGTINLGTPAMIGSYYLPDTLALFKQRYPGI 120 Query: 127 TIKLRNWDYDSLD-AITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 I + +L + GE+D+ + H I L + + Sbjct: 121 QINIHEAGTATLANMLLDGELDLAMIRADRH----------HDNIRCITLAKEQIVACVP 170 Query: 186 KDHPALHQ-TWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 ++H L+ F P + A+ + Q+ G I E + Sbjct: 171 REHEFAKCYNITLEQFCNQPLVLFREGYFLREAVSSYCQQHGINPDIRFETNLIELLKSL 230 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 + + + +L V P + + W + + Sbjct: 231 IRKKIGISTCLP----IILTEDSELVTVPFNPPIP--------IHLGIGWKASHYLSQAS 278 Query: 305 VWLRETIKNLYAS 317 L ++ Sbjct: 279 QALVTFLQEEMDG 291 >UniRef50_D0RY94 Transcriptional regulator n=4 Tax=Acinetobacter RepID=D0RY94_ACICA Length = 311 Score = 220 bits (563), Expect = 3e-56, Method: Composition-based stats. Identities = 71/325 (21%), Positives = 143/325 (44%), Gaps = 24/325 (7%) Query: 1 MKKS---ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVN 57 M + + +DLNL + +E+++T+A++++ ++ AVS +LA+LR F+DPLF+ Sbjct: 4 MNNNVASLARIDLNLFRVFVTIYKEKNLTRASEQLFLSQPAVSHALARLRDHFNDPLFIR 63 Query: 58 SPLGLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNAL 115 G+ P+PL + + + +Q+ + + + P +A I L ++ Sbjct: 64 DGHGVVPSPLAKRLWPKIEQSLQLMHQAIQSTYDFVPARDLKHLTIAMNDEYEGIFLPSI 123 Query: 116 SKQIYQRYPQATIKLRNWDYDSLD-AITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEV 174 + + Q P + D +L ++ G++D ++ S+ +I YE Sbjct: 124 IQHLTQFNPNLQLNSVRIDRKNLRHELSTGKIDFAI----------DVQHSVEDSIGYEC 173 Query: 175 LFSDVPCVWLRKDHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAM 233 D V RK HP L T + +L HI++ + D L + G +RTI+ Sbjct: 174 CTKDQFVVISRKQHPLLSSTDLTKEIYLDAKHITVSSRPTGRVFEDFFLSKQGIKRTISF 233 Query: 234 SLPEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLL 293 ++E ++ + Q D+LL + + + Q+ + LP+ L Sbjct: 234 RCQQYETAIRLITQTDHLLTIPQCQIAYFKDNYPQIKVHPLPIDI-------AGYQMNLY 286 Query: 294 WHKRNSHNPKIVWLRETIKNLYASM 318 W ++ SH +IVW + + + ++ Sbjct: 287 WDQQKSHEHQIVWCKAQLLQIMNNL 311 >UniRef50_A7HRT9 Transcriptional regulator, LysR family n=1 Tax=Parvibaculum lavamentivorans DS-1 RepID=A7HRT9_PARL1 Length = 315 Score = 220 bits (563), Expect = 4e-56, Method: Composition-based stats. Identities = 63/319 (19%), Positives = 119/319 (37%), Gaps = 22/319 (6%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 +I LDLNLLL + ERS++KAA ++ +T AVS +L +LR + D LF S G+ Sbjct: 1 MNIRELDLNLLLVFNAIYTERSISKAAVKLGITQPAVSNALRRLRNFTGDTLFYKSGSGV 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQIY 120 +PT ++ + + L P F + + ++ AL Sbjct: 61 APTRAAATLAIPIGHALDTVERGLSSVRSFDPATSRRTFRIGVNDIIHDALVPALVGYTR 120 Query: 121 QRYPQATIKLR-NWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 + P ++ +L+ + GE+D+ ++ ++ ++ D Sbjct: 121 REAPNLILEFVQQVGDRALEMLKGGEIDMALLPN----------FAIDDSLVSTKVWDDS 170 Query: 180 PCVWLRKDHPALHQ-TWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEF 238 + + ++HP +D + Q +D+ + G ER A ++ + Sbjct: 171 FAIIVARNHPIAKSNRLTVDDIRELRFVVTTHVQRLRTFIDSAFRANGMERVTACAVADT 230 Query: 239 EQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRN 298 + A D L + YN L + LP + Q + + W K Sbjct: 231 HNIYPLVAVSD-LAACVGRFHADRYNTDGSLVMFDLPFELPKIQGR-------IAWAKEA 282 Query: 299 SHNPKIVWLRETIKNLYAS 317 + W+RE + + S Sbjct: 283 DEDEGHRWVRERVLEILHS 301 >UniRef50_A5WDE8 Transcriptional regulator, LysR family n=1 Tax=Psychrobacter sp. PRwf-1 RepID=A5WDE8_PSYWF Length = 302 Score = 220 bits (563), Expect = 4e-56, Method: Composition-based stats. Identities = 73/316 (23%), Positives = 134/316 (42%), Gaps = 21/316 (6%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 + +D+ LLL Q + Q+ +++KAA+++++ A S L KLR FDDPLFV + P Sbjct: 1 MFDIDVRLLLLFQAIYQQNTISKAAQKLDIGQPAASLGLNKLRQHFDDPLFVRVGNQMQP 60 Query: 65 TPLMVSMEQNLAEWMQMSNLLLDKPHHQTP--RGLKFELAAESPLMMIMLNALSKQIYQR 122 T ++ + +Q + D HH P +F ++ MI++ L K + Q Sbjct: 61 TQTAQNLFPLVNNALQHIRAVNDYTHHFEPKNSSRRFHISMTDISHMIIVPKLIKYLKQH 120 Query: 123 YPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCV 182 P + + + D+ ++ GE+D+ + L + F V Sbjct: 121 APHTKLDISAINSDTPSRMSSGEIDLAIGY----------IPHLEAGFFQQTFFEQHYSV 170 Query: 183 WLRKDHP-ALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQS 241 +R+DHP T L+ + + H + + + L++ L+ +R IA++LP + Sbjct: 171 VVRQDHPRLTQNTLTLEAYQQEQHADVISSGTGHYLLEDHLRRRHIKRHIAITLPTYLGV 230 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 + Q D + + + Q ++L + LPL + WH+R N Sbjct: 231 GLIIQQTDLVA-TLPDKLAKLLLQENRLHTLPLPLDIPK-------YQVKQHWHERMHAN 282 Query: 302 PKIVWLRETIKNLYAS 317 P WLR+ L+ Sbjct: 283 PDNQWLRQVCYALFHQ 298 >UniRef50_A0JW92 Transcriptional regulator, LysR family n=3 Tax=Micrococcaceae RepID=A0JW92_ARTS2 Length = 306 Score = 220 bits (563), Expect = 4e-56, Method: Composition-based stats. Identities = 40/311 (12%), Positives = 88/311 (28%), Gaps = 26/311 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++ L + +ER +AA R+++ +S+ + +L PL V + + TP Sbjct: 1 METRHLKYFIAVAEERHFGRAAARLHMAQPPLSQQIRQLEEQLGTPLMVRTTRKVELTPA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQ-TPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + +Q +L + ++ + + + P Sbjct: 61 GQVLLDRGRVLLQELQVLESDVQQVGEGATGVLRVGFTGTATYRLMPIIVQAARRTLPGL 120 Query: 127 TIKLRN--WDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 I ++ A+ G +D H + I ++L D L Sbjct: 121 RITVQGEMLTPQMEAALEEGRLDAAVLRPPVHSGA----------IALKLLEQDQLVAAL 170 Query: 185 RKDHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 D P T L I + + + ++ G + + E L Sbjct: 171 PADSPLAEKGTLELAALSEEGFIGYPGYSAVSSIFVDACRKAGFQPRVVQEAKETSTLLS 230 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 + A + +A P + L + + + W+ P Sbjct: 231 LVAS--GMGIALVP-MTSRMFSYQGVAFRPL--------RNPPPMDLAVAWNSDKET-PL 278 Query: 304 IVWLRETIKNL 314 + + +L Sbjct: 279 LRAFLDLFDSL 289 >UniRef50_A4F7Y9 Transcriptional regulator, LysR family n=3 Tax=Actinobacteria (class) RepID=A4F7Y9_SACEN Length = 333 Score = 220 bits (563), Expect = 4e-56, Method: Composition-based stats. Identities = 43/295 (14%), Positives = 89/295 (30%), Gaps = 26/295 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L + +E+S+T+AA R+++ +S L KL L + G T Sbjct: 1 MELRHLRYFVAIAEEQSLTRAAARLHIAQPPLSAQLRKLETELGAVLVHRTARGTQLTDA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQ-TPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + + + + R + L ++L + +Q RYP+ Sbjct: 61 GRVLLEEARRILHEVDHAAQMTREAGSGRVGRLSLGFIPSASNVVLPPILRQFKARYPEV 120 Query: 127 TIKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 ++LR D ++ + +D GF S + + D + L Sbjct: 121 RLRLREMRPDEIVERLHDRRIDAGFFYLPIDDPS----------LHVRSVADDSLVLALP 170 Query: 186 KDHPALHQT-WNLDTFLRYPHISICW--EQSDTWALDNVLQELGRERTIAM-SLPEFEQS 241 HP +L P I ++ + G + + + Sbjct: 171 STHPLADSPEVDLRAVAGEPFILPPRYDMPGLYTSVTQACERAGFTPRVVQPDVWLMQTI 230 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHK 296 + + A + +A P Q + F + W + Sbjct: 231 VGLVAG--GMGIAVVPSSVQQIPRAGA--------TFVPLTDVSATARMAMAWRR 275 >UniRef50_B0C4T0 Transcriptional regulator, LysR family n=1 Tax=Acaryochloris marina MBIC11017 RepID=B0C4T0_ACAM1 Length = 307 Score = 220 bits (562), Expect = 4e-56, Method: Composition-based stats. Identities = 64/309 (20%), Positives = 129/309 (41%), Gaps = 24/309 (7%) Query: 15 CLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSP-LGLSPTPLMVSMEQ 73 +L+QE SVT+AA+++N++ SA+S +L +LRA DP+ + + + TP + + Sbjct: 18 AFDILVQEASVTQAAEKLNMSQSAMSHALKRLRAVLKDPILIRTSQRQMEVTPYALEISP 77 Query: 74 NLAEWMQMSNLLLDKPHHQTPRGLK--FELAAESPLMMIMLNALSKQIYQRYPQATIKLR 131 + + + L P + F +A + + L +Q+ Q+ P I+++ Sbjct: 78 QVRQILAEIQETLLAKDVFNPATAQEDFRIATNDYVEATLSANLLQQLTQQAPGIQIRVK 137 Query: 132 NWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPA 190 + D L A+ +D+ L E L+ + L+ D P Sbjct: 138 GLNKDAVLAALDDNSIDLFIGAGL----------DLKRWHVQESLYQEEFVCVLQSDCPL 187 Query: 191 LHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQPDN 250 +L+ ++ HI + ++ D +L++ + R + S P F F+ A D Sbjct: 188 T--ELSLEQYVERTHILVSFQDDFRGIGDLILEQQQQSRQVVWSTPHFMVVPFLLANSDC 245 Query: 251 LLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWLRET 310 + L R + + L L+ P+ +++WH+R+++ P+ WLR+ Sbjct: 246 VAL-LPKRMAERCAKEMGLKLLPPPIDV-------TRFTVSMIWHQRHNNRPQHQWLRKQ 297 Query: 311 IKNLYASMA 319 +A Sbjct: 298 FLIAAKQLA 306 >UniRef50_A1VMI6 Transcriptional regulator, LysR family n=28 Tax=Bacteria RepID=A1VMI6_POLNA Length = 333 Score = 220 bits (562), Expect = 5e-56, Method: Composition-based stats. Identities = 64/298 (21%), Positives = 103/298 (34%), Gaps = 21/298 (7%) Query: 20 MQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSMEQNLAEWM 79 RSVT+AA+++ + VS LA+LR DPLFV +P G+ PTP ++ + E + Sbjct: 53 YNTRSVTRAAEQLGQSQPTVSIWLARLRRQLGDPLFVRTPEGMLPTPRTDALIATVREVL 112 Query: 80 QMSNLLLDKPHHQTP--RGLKFELAAESPLMMIMLNALSKQIYQRYPQATIKLRNWDYDS 137 + L + P F + + +L L + PQ ++ D Sbjct: 113 EGLRRLSESESRFDPATAQRGFRIFMTDASHITLLPRLFSHVRALAPQVRLEAATIDARM 172 Query: 138 LDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPALHQTWNL 197 A+ GE D+ L+ L + LF HP + + + L Sbjct: 173 APALQSGEGDLALG----------LVPGLEAGFYQQTLFGQDWICLCNARHPRIGEMFTL 222 Query: 198 DTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQPDNLLLATAP 257 + HI I LD L+ G R + + LP F + + D + Sbjct: 223 QDYAAEAHIGIVSGTGY-QLLDGALKSQGIARRVLLELPGFLGLAAILSTSDLVA-TLPR 280 Query: 258 RYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWLRETIKNLY 315 + L ++ P WH R H+ WLR L+ Sbjct: 281 HIGETLANAAGLRVLPCPFEIP-------GFTVKQYWHARYHHDAGNRWLRGVCAELF 331 >UniRef50_B4WMZ4 Putative uncharacterized protein n=1 Tax=Synechococcus sp. PCC 7335 RepID=B4WMZ4_9SYNE Length = 289 Score = 220 bits (562), Expect = 5e-56, Method: Composition-based stats. Identities = 51/295 (17%), Positives = 103/295 (34%), Gaps = 25/295 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L + E +AAKR+N+ +S + +L + D LF + +S T Sbjct: 1 MNLRQLNYFLAVANELHFGQAAKRLNMAQPPLSMQIKQLESDLDVQLFERTQRKVSLTAA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQT-PRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 +++ + ++ + K + +A S M +L Q YPQ Sbjct: 61 GEVLKKEAEQILERIEVARRKTQQADRGETGQMAIAFVSSAMYSILPPWISAFRQSYPQV 120 Query: 127 TIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + + + + + ++DIGF S I +V++ + V L Sbjct: 121 ALTFQEATGLEQISGLLSHQIDIGFVRPPIEDVS----------ISDKVVWREPLVVALP 170 Query: 186 KDHPAL-HQTWNLDTFLRYPHISICWE--QSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 + H H+ ++ + + P I I + + Q+ I + + + L Sbjct: 171 EGHRLSTHKAISISSLEQEPFILIQRPLASEMYDKIISFCQQASFSPNITQTAQQLQTIL 230 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKR 297 + A NL +A P Q + + P + V ++W K Sbjct: 231 GLVAA--NLGIAILPTAAQKLQRAG---ICYRPF-----IETTPAVELVMIWRKD 275 >UniRef50_C5AL93 Transcriptional regulator, LysR family protein n=13 Tax=Burkholderia RepID=C5AL93_BURGB Length = 331 Score = 220 bits (561), Expect = 7e-56, Method: Composition-based stats. Identities = 74/322 (22%), Positives = 131/322 (40%), Gaps = 24/322 (7%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 +S+ +DLNLL +++E+S+TKA R+ ++ A+S SLA+LRA FDDPLFV + G+ Sbjct: 2 RSLDGVDLNLLQVFLAIVEEQSLTKAGARLALSQPAMSYSLARLRALFDDPLFVRTRHGM 61 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPR--GLKFELAAESPLMMIMLNALSKQIY 120 PTP+ + +A + L P F L+ M L ++ +++ Sbjct: 62 QPTPISQELAVIVARALDTVREALRYAERFDPAVSTRAFRLSLSDAGEMAYLPSICEEVN 121 Query: 121 QRYPQATIKLRNWD-YDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 + P + ++ + DA+ +D ++VLF + Sbjct: 122 RLAPNIKVVVQPLPVGEIEDALRARRLDFAIGNLPELTART----------RHQVLFEEG 171 Query: 180 PCVWLRK--DHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPE 237 +R+ P L F R H+ + + ALD+ L+ G R I + +P Sbjct: 172 YVCMMRRRVGGP-ARPALTLAEFGRASHVLVRSIEHSHHALDDALRTQGVARNIGLEVPH 230 Query: 238 FEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKR 297 F + A D + R Q + + + LP+ V T+ WH+ Sbjct: 231 FVALPRVLAVTDFVA-TLPRRLAQIFAKDGAFDIFELPVAI-------APVGVTMHWHEH 282 Query: 298 NSHNPKIVWLRETIKNLYASMA 319 + I W+R+ + + A Sbjct: 283 FHEDEGIAWMRQLLGQIMRRFA 304 >UniRef50_Q1IHL3 Transcriptional regulator, LysR family n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1IHL3_ACIBL Length = 306 Score = 220 bits (561), Expect = 7e-56, Method: Composition-based stats. Identities = 39/314 (12%), Positives = 99/314 (31%), Gaps = 26/314 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L + +E +AA R+++ +S+ + KL LF + + T Sbjct: 5 IELRHLRYFVAVAEELHFGRAAARLHLAQPPLSQQIKKLEEILGYALFTRTSRAVKLTSA 64 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQ-TPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + ++ +++ + M+ +L A+ + + YP+ Sbjct: 65 GEVFLERAQRTLRHVREDMEEVRSIGRGEVGYLRVGFIGSSMLTVLPAIFGRYRRAYPKV 124 Query: 127 TIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 ++L+ ++ + + +D G + E L+S+ L Sbjct: 125 NLQLQESYTSGVVEGLLKATLDAGILRDGGPT----------HGLTVERLYSEPFVAVLP 174 Query: 186 KDHPALHQT-WNLDTFLRYPHISICWEQSDTWAL--DNVLQELGRERTIAMSLPEFEQSL 242 HP Q + P + S ++ + G + P++ L Sbjct: 175 GKHPLAKQRALSPRALKDEPFVFYPPYSSKLAYEKPVSICEAHGFRPKVVQEAPQWLTIL 234 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 + L ++ AP + + A + + + L + + Sbjct: 235 RLV--GAGLGVSIAPACVE--------RIAAPDVVCIPLRGAAVRSDIELAFREGEGRE- 283 Query: 303 KIVWLRETIKNLYA 316 + E +++ +A Sbjct: 284 IVRAFAEIVRDGFA 297 >UniRef50_B7VQV6 Transcriptional regulator n=10 Tax=Vibrionales RepID=B7VQV6_VIBSL Length = 315 Score = 220 bits (561), Expect = 7e-56, Method: Composition-based stats. Identities = 67/314 (21%), Positives = 127/314 (40%), Gaps = 20/314 (6%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 + ++LNLL L +L++E V++ A+R+++T SAVS+ LA+LR DPL V L P Sbjct: 2 LGNINLNLLRSLHVLLEECHVSRTAQRLHITQSAVSRQLAQLRDLCGDPLLVRDGNKLVP 61 Query: 65 TPLMVSMEQNLAEWMQMSNLLLDK-PHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRY 123 T + ++ L + + + LLD P + LA+ + +L + ++ + Sbjct: 62 TNRALLLKGKLDDLLGEFDHLLDDKPFDPQDWQGELVLASSDYVAQYILPIIVSEVSKDA 121 Query: 124 PQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVW 183 P + R W + L+ + + + + P + L D Sbjct: 122 PHINLAYRLWQPNFLETLNESGIHLA----------SSMFPKKPDHVSSIKLGEDKSVCL 171 Query: 184 LRKDHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 +R HP Q+ + + + Y HI + D L++ G +R IA+ +P F + Sbjct: 172 MRASHPLAKQSAISSEDIVNYSHIKVTGGGDKDSYSDIALKKQGHKRRIALQVPFFSSAG 231 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 + Q D L++ + + +LP + + L+WH + ++ Sbjct: 232 NVLMQDDYLMI-VPEHIAYNLGRHLDVAYFSLPFETEMH-------TYWLMWHPKYDNDS 283 Query: 303 KIVWLRETIKNLYA 316 W RE Sbjct: 284 AHKWAREKAFKAIQ 297 >UniRef50_Q46MA3 Transcriptional regulator, LysR family n=1 Tax=Ralstonia eutropha JMP134 RepID=Q46MA3_RALEJ Length = 296 Score = 220 bits (561), Expect = 7e-56, Method: Composition-based stats. Identities = 41/313 (13%), Positives = 102/313 (32%), Gaps = 26/313 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +DL L + +E + T+AA+R+++ +S + +L D L + + T Sbjct: 5 MDLRHLRYFIAIAEELNFTRAAERLHIAQPPLSMQIRQLEEEMDVTLLNRTRRHVELTEA 64 Query: 68 MVSMEQNLAEWMQMSNLL-LDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + ++ + + + + +L + + +R+P Sbjct: 65 GRIFLEQARQILRATERAVVQAQRAHRGETGRLTVGFFEHTSYTLLPPILRAYRERFPSV 124 Query: 127 TIKLRNWD-YDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 I LR + +A+ RG+ DI F + +E + + + + Sbjct: 125 EILLRWFPVVKQAEALRRGDADISFMRPVPDLE----------EVTWETILEEPFVLAVP 174 Query: 186 KDHPAL-HQTWNLDTFLRYPHISICWE--QSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 HP ++ +L + P + E + G + + + L Sbjct: 175 ARHPLANAESISLKKCAQEPFVMYIPEMAPDFHAMNMRMCASAGFVPKVISEVGQVYTLL 234 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 + + + ++ +V P+ ++ + L + +R P Sbjct: 235 GLVSSGAGIGFVP-----ASVRKVKFDHVVYKPIE-----GRQPTIEIMLGYSQRTPT-P 283 Query: 303 KIVWLRETIKNLY 315 + ET K++ Sbjct: 284 LMTAFIETAKSML 296 >UniRef50_A6VV39 Transcriptional regulator, LysR family n=6 Tax=Gammaproteobacteria RepID=A6VV39_MARMS Length = 295 Score = 219 bits (560), Expect = 8e-56, Method: Composition-based stats. Identities = 44/312 (14%), Positives = 95/312 (30%), Gaps = 25/312 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +D+ L + + S TKAA+++ V AVS ++ KL A L + + T Sbjct: 1 MDIKPLRYFIAIAKTESFTKAAQQLGVAQPAVSMAIKKLEADLGLTLIHRADRNIGLTDE 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTP-RGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + + +Q ++ L + + + S L + +YP Sbjct: 61 GKKLLIHAEKIIQATDDALLEMSELKGLSQGEVRVGIPSMLGSYYFPPILMAFRHKYPTI 120 Query: 127 TIKLRNWDYDSLD-AITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 T+K+ L + GE+D+ + +LP ++ + L + V + Sbjct: 121 TLKVIEGGTWQLQKMLENGELDLSVI----------VAETLPDGLETQALIREEMLVTIA 170 Query: 186 KDHPALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 DHP + + + F + +D + + + I + Sbjct: 171 TDHPFSQLEKISPEAFFDEELVMFKEGYFHRRIVDKLAKACKKTPKIGFETNLIPLIKSI 230 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 Q ++T + P+ + W K + + Sbjct: 231 TQQ--GFGISTLLAMVIEEDDDLITRSFDPPIWL----------DLGIAWRKDSYLSKAN 278 Query: 305 VWLRETIKNLYA 316 E + Sbjct: 279 RAFLEFVNEHGR 290 >UniRef50_C8WUA0 Transcriptional regulator, LysR family n=1 Tax=Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 RepID=C8WUA0_ALIAD Length = 298 Score = 219 bits (560), Expect = 8e-56, Method: Composition-based stats. Identities = 44/311 (14%), Positives = 104/311 (33%), Gaps = 26/311 (8%) Query: 9 DLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLM 68 +L L + +E +AAKR+ +T +S+ + KL LF + + T Sbjct: 4 ELRQLEYFVAVAEELHFGRAAKRLGLTQPPLSQQIQKLEDEIGVTLFDRTNRRVQLTHAG 63 Query: 69 VSMEQNLAEWMQMSNL-LLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQAT 127 + + + + + R + +A L + + +R+P Sbjct: 64 RVLLEEARKVLAHVQTAVKAARDAAAGRVGRLSVAFVGSATYGWLPEVIRAYQERHPDVE 123 Query: 128 IKLRNWD-YDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRK 186 + LR ++A+T GE+D+G L + + ++ D + Sbjct: 124 LVLREMSTPAQMEALTAGELDVGVLR----------LPAQHPDLHVRLVERDDCVAVVPS 173 Query: 187 DHPAL-HQTWNLDTFLRYPHISICW--EQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 +HP + L P + + + + LG E + + + E + ++ Sbjct: 174 EHPLATRSSLFLVELAEEPFVLVSRAIWPGLYDGFITLARALGFEPRVRLEVTEVQTAVG 233 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 + A L ++ P + + + + + V + W +R +P Sbjct: 234 LVAA--GLGVSIVPSATE--------RVHRRDVRYLHIDGQSPTVELGVAWRRR-DTSPL 282 Query: 304 IVWLRETIKNL 314 + +++ Sbjct: 283 VAAFLAMAESV 293 >UniRef50_Q0KE24 Transcriptional regulator, LysR-family n=2 Tax=Cupriavidus RepID=Q0KE24_RALEH Length = 305 Score = 219 bits (560), Expect = 8e-56, Method: Composition-based stats. Identities = 44/311 (14%), Positives = 93/311 (29%), Gaps = 23/311 (7%) Query: 7 TLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTP 66 L L + ++AA + +T AVS+ +A+L L + + T Sbjct: 2 NYTLRQLRVFLAVANTGGFSRAADVVGLTQPAVSRGVAELEEALGVRLLDRTTREVVLTE 61 Query: 67 LMVSMEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQIYQRYPQ 125 ++ L + + L++ R + +A + ++ +YP+ Sbjct: 62 AGHALAPALERLLGQLDDTLEETRQLGERYRGRVVIAGAPTISARLMPLYVAACAAQYPE 121 Query: 126 ATIKLRN-WDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 + +R+ D L+ + G VD G + + E + +D C Sbjct: 122 IRLTVRDNVQADGLEQVRAGAVDFGVLIDPL----------VRDGLVVEPVATDPFCFVC 171 Query: 185 RKDHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 R+DHP + + + +D V G + L Sbjct: 172 RRDHPLAQSPSVPWAALHGMQLVLLDFASGSRPLIDRVFGRHGVVPLVVQELGHSASVFG 231 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 M + + P + L L E ++ + S +P Sbjct: 232 MVEA--GIGASVLPSFSLPLPAASPLVWRPL--------VPCEERSIVMVRREDRSLSPA 281 Query: 304 IVWLRETIKNL 314 + + ++ L Sbjct: 282 AAAVWDLVRRL 292 >UniRef50_C1DGS2 Transcriptinal regulator, LysR family n=1 Tax=Azotobacter vinelandii DJ RepID=C1DGS2_AZOVD Length = 301 Score = 219 bits (560), Expect = 8e-56, Method: Composition-based stats. Identities = 52/298 (17%), Positives = 106/298 (35%), Gaps = 26/298 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L L + KAA+ +++T +S+ ++ L A LF + T Sbjct: 2 IELRQLRYFMALAEHLHFGKAAESLHITQPPLSRQISALEADLGVVLFSRHSRSVELTAA 61 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHH-QTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 +Q+ + +L + + ++ I+L L K YP Sbjct: 62 GRDFQQHAKTALAELDLAIRSTRASARGERGELRVSFTMVAAWILLPELLKAYSDAYPDV 121 Query: 127 TIKLRN-WDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 ++ L D A+ RGE DI + S +S + Y L + C L Sbjct: 122 SLALNEVLPRDLGPALERGEADIALTFPSSGSKS----------LCYRALRREPLCAVLP 171 Query: 186 KDHPALHQT-WNLDTFLRYPHISICWEQ--SDTWALDNVLQELGRERTIAMSLPEFEQSL 242 HP T +++ P I+ + + A+ + + G E I + + + Sbjct: 172 ASHPLAAATEFSIAALADEPFITFPRQTAPALHEAVMSCCRRAGFEPKIRLETHLQQTIV 231 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 + A+ L ++ P + +P ++ + V + ++W+ RN + Sbjct: 232 NLVAE--GLGVSVVPGSMRKM---------RMPGVAFKAIDRSPPVEYGVIWNPRNEN 278 >UniRef50_Q7MFJ9 Transcriptional regulator n=28 Tax=Vibrio RepID=Q7MFJ9_VIBVY Length = 314 Score = 219 bits (559), Expect = 1e-55, Method: Composition-based stats. Identities = 65/316 (20%), Positives = 129/316 (40%), Gaps = 20/316 (6%) Query: 4 SITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLS 63 ++ ++DLNLL L+ L+ + +++AA+ +N++ AVS++L +LR F DPL V Sbjct: 7 NLRSIDLNLLTILEKLLIHKHISQAAQALNMSQPAVSRALMRLREQFGDPLLVKVNREYR 66 Query: 64 PTPLMVSMEQNLAEWMQMSNLLL-DKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQR 122 T + + L + +L D F + A MM+++ L + QR Sbjct: 67 LTAKGEYLRRELESSLNTIRQMLVDDAFDPLQYAGVFTIGALDFEMMMIVPKLLARFQQR 126 Query: 123 YPQATIKLRNWDYDS-LDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPC 181 P+ +++ ++ L D+ + P + + LF+D Sbjct: 127 APKLKLQIVPYNAYMPLHDYLEKVADLLLYSTD----------DSPTNVFKQRLFNDNYA 176 Query: 182 VWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQS 241 V + ++H +Q L+ + R H+ + +D+ L+ ++R + SLP F Sbjct: 177 VVMCQNHVLANQPMTLERYCRSRHVIVSGNGLGKTDIDHELKRRNQQREVVASLPHFSMV 236 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 + D + R + + +++ + LP + WH + N Sbjct: 237 PELLINTDLIA-TLPRRLVSHLSHRYEITVAELPF-------YTADFQVEQFWHLIHHSN 288 Query: 302 PKIVWLRETIKNLYAS 317 P W+R+ IKN+ Sbjct: 289 PAHQWVRQEIKNMVDE 304 >UniRef50_A9GGP1 LysR-family transcriptional regulator n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9GGP1_SORC5 Length = 312 Score = 219 bits (559), Expect = 1e-55, Method: Composition-based stats. Identities = 70/316 (22%), Positives = 128/316 (40%), Gaps = 19/316 (6%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 +++ +D+NL++ L L+QERSVT AA+R+ ++ A+S +L +LR F DPL + + Sbjct: 1 MNLSAIDVNLVIALDALLQERSVTLAARRVGLSQPAMSHALTRLRELFSDPLLIRVGRQM 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDK---PHHQTPRGLKFELAAESPLMMIMLNALSKQI 119 + T +M + + L + F +AA + ++++ L+ + Sbjct: 61 ALTSRAEAMTPQVTAIVHDLAGLFGETTPTFDPATSDRAFRIAATEYVELVLMPRLNAAL 120 Query: 120 YQRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 Q P+ + L D ++DA+ GE+D+ LP + LF D Sbjct: 121 AQGGPRLALHLLPLDGRAVDALRSGEIDLAIGVFPQES--------LPPDLRRAPLFDDR 172 Query: 180 PCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFE 239 R HP +L T+ PH+ + + D+++ G R AM++P Sbjct: 173 FAGLARMSHPTARGQVDLQTYAALPHVVVPRRGAHDGVADDLIAARGIARHEAMTVPHVL 232 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 D + A R + ++ L L LP + + W+ R Sbjct: 233 LVPHAITASDLVA-TVATRLGRAFSSLVPLRTFDLPFELP-------PIEIAMAWNSRTE 284 Query: 300 HNPKIVWLRETIKNLY 315 +P WLR + + Sbjct: 285 RDPARAWLRGVVTDTA 300 >UniRef50_B9KVK0 Transcriptional regulator, LysR family n=1 Tax=Rhodobacter sphaeroides KD131 RepID=B9KVK0_RHOSK Length = 321 Score = 219 bits (559), Expect = 1e-55, Method: Composition-based stats. Identities = 45/310 (14%), Positives = 92/310 (29%), Gaps = 22/310 (7%) Query: 7 TLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTP 66 +DL L + +S AA I+++ A+++ + KL A L + +S T Sbjct: 15 NIDLEDLRAFVATAEMQSFRAAADSIHLSQPALTRRIQKLEATLGVSLLERTTRRVSLTA 74 Query: 67 LMVSMEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNALSKQIYQRYPQ 125 + + L R +A L + + +P Sbjct: 75 VGRDFLPRARRILDDLETSLLSVREIAERRSGLVSIACIPTAAYYFLPDVISAFTEEFPA 134 Query: 126 ATIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 ++ + + L +I E D G + LL + + ++ L + + Sbjct: 135 IRFRIFDAGANEVLQSILNREADFGIT----------LLGADDPDVTFDPLIEEPFLLAC 184 Query: 185 RKDHPALHQ-TWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 R+DHP Q + + +++ + +D L + SL Sbjct: 185 RRDHPLARQESVTWADLAAHRFVTVGRTSGNRLIMDLALARANVRPRSFFEVQHLSTSLG 244 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 + L +A PR + + L P + VP P Sbjct: 245 LVEA--GLGVAALPRMALPAGPHPSIVTLPLIEPRVTRTVGVVRVP-------GARRAPA 295 Query: 304 IVWLRETIKN 313 + + + Sbjct: 296 AEQFYQMLLS 305 >UniRef50_C3LMU4 Transcriptional regulator, LysR family n=65 Tax=Gammaproteobacteria RepID=C3LMU4_VIBCM Length = 296 Score = 219 bits (559), Expect = 1e-55, Method: Composition-based stats. Identities = 43/311 (13%), Positives = 89/311 (28%), Gaps = 25/311 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +++ L + + S T AA+++++ A+S S+ K LF ++ T Sbjct: 8 MEVRQLRHFVTVAEWESFTLAAQQLHIAQPALSISIKKFEQQLGVTLFKRDERKVALTHE 67 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTP-RGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + ++ +Q N + L A S + + +P Sbjct: 68 GEVLLEHAKRILQQVNDAQLAVDELKGVVKGEVRLGAPSMMGSYFFPQIIMAFKSHFPNL 127 Query: 127 TIKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + + S+ + GE+DIG L LP + + L S + Sbjct: 128 KMTVIEAGTQSIRRMLLSGELDIGVI----------LNHDLPDDLAADPLLSSQMVAVVG 177 Query: 186 KDHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 K+H + F + + +D V +E + L + Sbjct: 178 KNHELAERRHLTFAEFFEHELVMFKPGYFHRDFIDKVCREHKFTADFSFETNLLPMILSI 237 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 + ++ + A+P + L W K + Sbjct: 238 VKHEYAITALL------ELVTSNEPEVKAIPFEPPVW------LDLALAWRKEGYLSNAD 285 Query: 305 VWLRETIKNLY 315 E +K Sbjct: 286 RTFIEFVKKYV 296 >UniRef50_A4XX96 Transcriptional regulator, LysR family n=3 Tax=Proteobacteria RepID=A4XX96_PSEMY Length = 312 Score = 219 bits (559), Expect = 1e-55, Method: Composition-based stats. Identities = 83/321 (25%), Positives = 143/321 (44%), Gaps = 24/321 (7%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 LDLNLL+ L+ L+ E++VT+AA R++++ AVS L++LR F+DPL + + G+ Sbjct: 1 MDTRRLDLNLLVTLEALLIEQNVTRAAARLHLSQPAVSAQLSRLRDVFNDPLLIPAQRGM 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGL--KFELAAESPLMMIMLNALSKQIY 120 +PT + + L + + + + P +A + ++ L + Sbjct: 61 TPTVKALELLVPLRQALDQVRATVTTHLNFEPATASLTVSIACTDYVQAALIKHLVVAMR 120 Query: 121 QRYPQATIKLRNWDYDSLD-AITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 + P I LR D L+ +TRGEVD+ ++ P A+ + L+ + Sbjct: 121 REAPGVRIALRILDVPQLELQMTRGEVDLAVIN----------MNGAPPALHAQHLYDES 170 Query: 180 PCVWLRKDHPALHQTWNLDTFLRYPHISIC-WEQSDTWALDNVLQELGRERTIAMSLPEF 238 + R+ HP+LH +D F + H+ + + ++DN L G R + +S F Sbjct: 171 YVLIGRRGHPSLHAGLTVDEFAQLEHVVVSLRGGGFSTSVDNALVARGLRRNVVLSASSF 230 Query: 239 EQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRN 298 + AQ D +A PR + QL VA PLP + + WH+R+ Sbjct: 231 LPVPELVAQSDC--VALVPRRLVE-GRDEQLLCVAPPLPVE-------GFAIGMFWHERS 280 Query: 299 SHNPKIVWLRETIKNLYASMA 319 + W+RE I + S A Sbjct: 281 DGHAGFRWVREFITLVADSRA 301 >UniRef50_A9AQX4 Transcriptional regulator, LysR family n=20 Tax=Proteobacteria RepID=A9AQX4_BURM1 Length = 315 Score = 219 bits (558), Expect = 1e-55, Method: Composition-based stats. Identities = 72/321 (22%), Positives = 131/321 (40%), Gaps = 25/321 (7%) Query: 2 KKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLG 61 ++ +DLNL + + +R++T+AA+ +N+T AVS +LA++R +DPLFV++P G Sbjct: 17 AMRLSKIDLNLFVVFDAIYNKRNLTRAAELLNLTQPAVSNALARMRKTLNDPLFVSTPAG 76 Query: 62 LSPTPLMVSMEQNLAEWMQMSNLLLDK--PHHQTPRGLKFELAAESPLMMIMLNALSKQI 119 + PTP ++ + E +Q+ + + + F L+ ++L AL + + Sbjct: 77 MMPTPFAENIVGRVREALQLLDSSVHEGDVFDPASSERVFRLSMSDLTEALLLPALGELL 136 Query: 120 YQRYPQATIKLRNWDYDSLD-AITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSD 178 ++ P ++ D + A+ G VDI + L D Sbjct: 137 QRQAPGMHVRSYTMDRREIATALANGTVDIAIDAPLLGDP----------HLHQAPLVRD 186 Query: 179 VPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEF 238 +R HP T +D +L HI + + + +D L LG R I M + + Sbjct: 187 RYACMIRDGHPFKGDTLTMDDYLAMGHIHVSSRRKGSGHVDAELTRLGLRRNIQMRVQHY 246 Query: 239 EQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRN 298 + +A + D L A Q + ++ LP + + WH+ Sbjct: 247 MVAPLIAMRGDLALTAPL-----RLLQRYPARILELPFEMP-------GLEYFCYWHRSA 294 Query: 299 SHNPKIVWLRETIKNLYASMA 319 + WLRE + L M Sbjct: 295 DQDQANRWLRERLAELMRDMG 315 >UniRef50_A1UYG7 Transcriptional regulator, LysR family n=45 Tax=Burkholderia RepID=A1UYG7_BURMS Length = 439 Score = 219 bits (558), Expect = 1e-55, Method: Composition-based stats. Identities = 66/315 (20%), Positives = 112/315 (35%), Gaps = 22/315 (6%) Query: 6 TTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPT 65 LDLNL L + + ++ AA+ +++T AV+ +L +LRA F DPLFV + PT Sbjct: 136 HRLDLNLFRVLDAVYVQGGISAAARALHLTQPAVTHALNRLRAHFGDPLFVRQGNKVVPT 195 Query: 66 PLMVSMEQNLAEWMQMSNLLLDKPHHQTP--RGLKFELAAESPLMMIMLNALSKQIYQRY 123 + ++ ++ +P + F + L I L L + + + Sbjct: 196 ERTREVIADVQRHLKGLQDAARAQTRFSPGALDMSFVVGVRDVLESIALPQLVETLAREA 255 Query: 124 PQATIKLRNWD-YDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCV 182 P + R D + G +D+ R I E + D V Sbjct: 256 PGVRLVSRRVPVADIGRELGSGNLDLAIERRVPAGP----------RIVAEHVADDTLVV 305 Query: 183 WLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 +R+DH + H+++ LD +L GR R I + + + Sbjct: 306 AMRRDHALAGAPLRRADYFAAGHVTVSPLGEPHT-LDVLLGADGRFRRIQLVCQHYFAAC 364 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 + A D LLL Y +L L LPL P WH+ + Sbjct: 365 QIVASGD-LLLTLPRSYALRMTRLLPLAAQPLPLRL-------KPYPILAYWHESRELDR 416 Query: 303 KIVWLRETIKNLYAS 317 W R+ + + + Sbjct: 417 AHQWFRQRVIEVVRA 431 >UniRef50_Q9FD34 PnbR n=2 Tax=Pseudomonas RepID=Q9FD34_PSEPU Length = 348 Score = 219 bits (558), Expect = 1e-55, Method: Composition-based stats. Identities = 73/340 (21%), Positives = 123/340 (36%), Gaps = 43/340 (12%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 LDLNL+ +M+ERSV +A++R++++ SAVS +L++LR +FV + G+SP Sbjct: 23 FDKLDLNLIRVFDAVMEERSVLRASQRLHLSQSAVSHALSRLREGLGQEIFVRTGKGMSP 82 Query: 65 TPLMVSMEQNLAEWMQMSNLLLDKP---HHQTPRGLKFELAAESPLMMIMLNALSKQIYQ 121 T + + L + + L + F +AA + +L L+ Q+ + Sbjct: 83 TSYALEISGALHAALLSMSKALSQAATPFSPQSVCRSFVIAANDYVSATLLPQLNHQLSK 142 Query: 122 RYPQATIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 P +++ D + I G +D+ S P VLF D Sbjct: 143 VAPGIDLQITPATRLDLAEQIDLGRIDVAIGTFRSVPERFRTKP---------VLFQDE- 192 Query: 181 CVWLRKDHPALHQTWNLDTFLRYPHISICWEQSD---------------------TWALD 219 HP L +RYP + AL+ Sbjct: 193 VFICSGTHPISANKPQLQDLVRYPLAVVSLGGEGEGMLSGYILERGLARQAQMYDRTALE 252 Query: 220 NVLQELGRERTIAMSLPEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFD 279 L E G + LP F + + L + P + + + + LP P Sbjct: 253 QALNEAGLSMRRQIVLPHFLALPMLLEGSELLAIVPQP-LARTFARTLGFKIKPLPYPAA 311 Query: 280 ESQQKKLEVPFTLLWHKRNSHNPKIVWLRETIKNLYASMA 319 Q L+WH N ++P +WL E I ++ Sbjct: 312 RQQLD-------LIWHSSNDNDPAQLWLHEQISEAANEIS 344 >UniRef50_UPI000178812A transcriptional regulator, LysR family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI000178812A Length = 312 Score = 219 bits (558), Expect = 1e-55, Method: Composition-based stats. Identities = 34/315 (10%), Positives = 101/315 (32%), Gaps = 22/315 (6%) Query: 7 TLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTP 66 +++ L + QE T+A++++ VT +S + + PLF ++ T Sbjct: 13 DMEIRQLEYFMAVCQELHFTRASEKLGVTQPTLSHQIKAIEDELGMPLFDRIGKKIAITE 72 Query: 67 LMVSMEQNLAEWMQMSNLLLDKPHHQ-TPRGLKFELAAESPLMMIMLNALSKQIYQRYPQ 125 + ++ + ++ + + + + ++ L ++ Y + Sbjct: 73 AGFILLKHCHTVFHSFKSVREEIQELQDIKRGRLSVGVLPGELNALVCRLLPDFHEAYSE 132 Query: 126 ATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 +++ + D + + + E+D+ + H I ++L+ + + + Sbjct: 133 VQVRVISAD-NVAERLLNNEIDLALTIIPVHDE----------RIVSQLLYKEKLYLVVN 181 Query: 186 KDHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 DHP +L+ P + LD++ + A+ + E + + Sbjct: 182 ADHPLAEGPEVSLEALKDLPLVLFPKNYRCRHQLDSICNLKEIDLRPAIEIDAIESMITL 241 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 + + + +V + L++HK + Sbjct: 242 IEA--GVGCSILSETLMKQWDKPGVKIV-------NIAENPFLRQVGLIYHKDKYRGQVV 292 Query: 305 VWLRETIKNLYASMA 319 + E + + + Sbjct: 293 LKFTELLHKQISQLG 307 >UniRef50_A3YHF6 Transcriptional regulatory protein n=2 Tax=Gammaproteobacteria RepID=A3YHF6_9GAMM Length = 308 Score = 219 bits (558), Expect = 2e-55, Method: Composition-based stats. Identities = 67/314 (21%), Positives = 131/314 (41%), Gaps = 19/314 (6%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 + DLNL++ +M+E+S+T AA + +T +VS +++++R + DPLFV G+ P Sbjct: 1 MAKTDLNLVVIFDAIMKEKSITSAADSLAMTQPSVSNAVSRMRHAWKDPLFVKEGRGIRP 60 Query: 65 TPLMVSMEQNLAEWMQMSNLLLDKP-HHQTPRGLKFELAAESPLMMIMLNALSKQIYQRY 123 TP + + +AE + N + F + I+ L I Q Sbjct: 61 TPYATKLWKRVAEPLAQINHAIAPEYFDPLTSKASFRIGITDGSASIVWPELRHIIEQEA 120 Query: 124 PQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVW 183 P I + D + +VD+ F + + I Y+ ++ + Sbjct: 121 PNINIYAVPYKVDGELLLNNADVDLVFDYYDGNSD----------EIFYKSMYENQFVTV 170 Query: 184 LRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 +R DH ++ L+ +++ H+ + +D+ L EL +R AM++ F ++ Sbjct: 171 MRADHELANEELTLERYIKSEHLLVSLSGDVCGIVDDKLAELNAKRRTAMTVNSFASAIN 230 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 + Q ++ P ++ L L +PL + +L WH RN+H+ Sbjct: 231 LIKQTRLIITMPYPIIAEHLA-AGDLVLKPVPLELP-------SIKISLAWHSRNNHSQA 282 Query: 304 IVWLRETIKNLYAS 317 + WL + + + S Sbjct: 283 LKWLIKVLDRIIDS 296 >UniRef50_D2YJX0 Transcriptional regulator, LysR family n=1 Tax=Vibrio mimicus VM573 RepID=D2YJX0_VIBMI Length = 314 Score = 218 bits (557), Expect = 2e-55, Method: Composition-based stats. Identities = 67/318 (21%), Positives = 129/318 (40%), Gaps = 23/318 (7%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 + DLNLL +M SV KAA ++N+T +AVS++L++LR +PLF+ GL P Sbjct: 15 LRDYDLNLLTVFDAVMTLGSVNKAADKLNMTSAAVSQNLSRLRDQVGEPLFIRQGRGLQP 74 Query: 65 TPLMVSMEQNLAEWMQMSNLLLD--KPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQR 122 T ++M ++++ + L+ +F + +++L L ++I + Sbjct: 75 TQYALNMHKHVSAGLSAIRFGLETNACFDPATSTREFVIGGHGYFDLVVLPQLLRKISEV 134 Query: 123 YPQATIKLRNWDYDSL---DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 P T+ L+ ++ D ++ E D+ + L +I + + Sbjct: 135 APHITVNLKPYEDDHFTPSQVLSEREADLFLAS----------LPISHPSIITTQIAEEA 184 Query: 180 PCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFE 239 V K+HP L +T F H ++ + + ++L + R + Sbjct: 185 LVVVYAKNHPRLGETLTFQQFFDEKHTALTSRRFGHYLFSSLLDQALPARKVHYQSDSML 244 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 + A+ D L R + + L + LP VP + WHK Sbjct: 245 NLMATASVTDLLCFT-PKRLADMWAEKLGLHIQPLPFEMR-------PVPTFMCWHKAKQ 296 Query: 300 HNPKIVWLRETIKNLYAS 317 + ++WLRE I+ +++ Sbjct: 297 QDKGLIWLREQIEEVFSQ 314 >UniRef50_A6FYP7 Transcriptional regulator, LysR family protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6FYP7_9DELT Length = 312 Score = 218 bits (557), Expect = 2e-55, Method: Composition-based stats. Identities = 86/317 (27%), Positives = 132/317 (41%), Gaps = 18/317 (5%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 + LDLNLL+ +L +ERSVT+AA R+ VT SA+S +L +LR +D L V + G++ Sbjct: 9 LAQLDLNLLVAFDVLAEERSVTRAAARLGVTQSAMSHTLRRLRGVLEDELLVRTRGGMAL 68 Query: 65 TPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQIYQR 122 TP ++ + + L P P F L ++ L L Sbjct: 69 TPRAAALVAPVRTGLTTLQRALADPEGFDPATSERHFRLTGPDLFELLYLPRLIAGFGAS 128 Query: 123 YPQATIKL-RNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPC 181 + ++ L D + GE+D+ + R R + + VL D Sbjct: 129 AGRLSVTLAHVAPRQLADQLETGELDLAITARMLDGREQPAQP----GLMRRVLLRDGWR 184 Query: 182 VWLRKDHPAL--HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFE 239 ++R HPAL +L FL H+ + +D VL E +RT+A+ + F Sbjct: 185 CFVRAGHPALTKRGRLSLPRFLAASHVMVSPTGRGQGIVDVVLAEQDEQRTVAVRVSSFA 244 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 + +AA D L+ TAP + L VA PLP E + WH+R S Sbjct: 245 TAPVVAASSD--LILTAPASLEAVVGHLGLVCVAPPLPLPEH-------SVDMTWHQRLS 295 Query: 300 HNPKIVWLRETIKNLYA 316 +P WLRE + Sbjct: 296 EDPGHQWLREQLVAATR 312 >UniRef50_A0KH33 Transcriptional regulator, LysR family n=2 Tax=Aeromonas RepID=A0KH33_AERHH Length = 313 Score = 218 bits (557), Expect = 2e-55, Method: Composition-based stats. Identities = 70/307 (22%), Positives = 130/307 (42%), Gaps = 19/307 (6%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 + +LNLL L++L++ R++++AA+ ++++ ++SK L +LR+ F D L V Sbjct: 1 MHKANLNLLPTLKVLLETRNISRAAELLHLSQPSISKQLGQLRSEFGDELLVREGQRWLL 60 Query: 65 TPLMVSMEQNLAEWMQMSNLLLDKP-HHQTPRGLKFELAAESPLMMIMLNALSKQIYQRY 123 TP ++ LA+ + L + P + F LA+ + +L + + + Sbjct: 61 TPRAEALAAQLADSLGALERLYEAPGFDPSRCERVFRLASSDYVAQHILPDICAALAREA 120 Query: 124 PQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVW 183 P A ++ WD L + + E+D+ + +P I D V Sbjct: 121 PLAALEYSLWDKRLLPQLWQSELDMV----------STITELVPDQIRGLHQGEDRLVVL 170 Query: 184 LRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 + HP ++ +LD +L +PH+ + ++ VL G R +P F+ ++ Sbjct: 171 MGSHHPLAGRSLSLDDYLAWPHLQVSGGGDKDSPVEQVLAPQGLSRRWFARVPFFQAAVE 230 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 + + D LL T + H L LP Q + LLWH+R+ +P Sbjct: 231 VLLRTDCLL-TTPAHIAWQLSCEHALHFCDLPFASRTQQ-------YHLLWHQRHHQDPA 282 Query: 304 IVWLRET 310 W RE Sbjct: 283 HKWFREL 289 >UniRef50_Q13GK2 Transcriptional regulator, LysR family n=1 Tax=Burkholderia xenovorans LB400 RepID=Q13GK2_BURXL Length = 311 Score = 218 bits (557), Expect = 2e-55, Method: Composition-based stats. Identities = 79/322 (24%), Positives = 130/322 (40%), Gaps = 26/322 (8%) Query: 1 MKKSIT--TLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNS 58 M+++ TLD+ LLL L++ERSV++AA + +T SAVS+ L +LR F DPLF+ + Sbjct: 1 MRRNPRVDTLDIKLLLVFDALLRERSVSRAADDVGLTQSAVSQKLGRLRDIFSDPLFIRT 60 Query: 59 PLGLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALS 116 G+ PTP + + LAE + L+ P F +A + L + Sbjct: 61 ANGMEPTPHALVLSAQLAELLARWKSLVSSQQRFEPATAERNFRVALSDGMSYHCLPPVV 120 Query: 117 KQIYQRYPQATIKLRNWDYDSLDA-ITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVL 175 ++I + P I + + I G D+ + P+ I L Sbjct: 121 RRIREIAPNLRITIVHVGPRGGQREIESGSADLALG----------VFQQPPIGISTCEL 170 Query: 176 FSDVPCVWLRKDHPALHQ-TWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMS 234 F K++P L Q T + D +L HI++ ++ +++ LG +R IA+ Sbjct: 171 FRYTLQCVADKNNPRLKQGTMSRDEYLEASHIAVGENNVPGTLVEVIVEALGLKRKIALV 230 Query: 235 LPEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLL- 293 P F + D + Y +QL +P P E + Sbjct: 231 TPHFVSIPNLVLGTDLIG-TFPSSAQDAYPFSNQLCFFPIPFPISE--------SIAMAM 281 Query: 294 WHKRNSHNPKIVWLRETIKNLY 315 WH R +P +WLR + Sbjct: 282 WHPRFDGDPGHMWLRNLFADTL 303 >UniRef50_A8GZD3 Transcriptional regulator, LysR family n=22 Tax=Gammaproteobacteria RepID=A8GZD3_SHEPA Length = 335 Score = 218 bits (557), Expect = 2e-55, Method: Composition-based stats. Identities = 85/295 (28%), Positives = 145/295 (49%), Gaps = 9/295 (3%) Query: 23 RSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSMEQNLAEWMQMS 82 +SVT AA R++++ SAVSK L+KLR FDD LF + GL TP + + L E +Q Sbjct: 44 QSVTSAATRLHLSQSAVSKQLSKLRETFDDQLFERTAYGLKATPRALQLAPELREVLQKL 103 Query: 83 NLLLDK-PHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQATIKLRNWDYDSLDAI 141 + +F + + ++ ++ PQ +I W + S++ + Sbjct: 104 DQFTRPSTFEPAESQRRFRMHIVETAYSLTYPYFMPKLLKQAPQVSINGHTWSHSSMEQL 163 Query: 142 TRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPALHQTWNLDTFL 201 R E+D+G RE RS +++LP + L D P LR+DHPAL + WN+DTFL Sbjct: 164 LRCEIDMGIICREWDKRSLLHMNNLPEELGAAELIRDYPVCLLRRDHPALKEPWNIDTFL 223 Query: 202 RYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQPDNLLLATAPRYCQ 261 +Y H+ + + + W LD+VL+ +R +A+++ +F ++ + D +L A +Y Q Sbjct: 224 KYRHLQVAFGGLEHWLLDDVLRLDHLQRDVAVNMTDFNCAMDLCENSDLILCA-PRKYIQ 282 Query: 262 YYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWLRETIKNLYA 316 + L + +P+ + + L+WHK + +P WLR I + Sbjct: 283 QMMVNYDLVCLDVPVHVEPGA-------YVLVWHKHFNLDPSHSWLRNLIIDGVR 330 >UniRef50_Q2CCM2 Transcriptional regulator, LysR family protein n=1 Tax=Oceanicola granulosus HTCC2516 RepID=Q2CCM2_9RHOB Length = 313 Score = 218 bits (557), Expect = 2e-55, Method: Composition-based stats. Identities = 85/324 (26%), Positives = 133/324 (41%), Gaps = 26/324 (8%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 ++ DLNLL L L++ERS T+AA R+ ++ AVS +L +LRA D LF+ GL Sbjct: 1 MNLAGFDLNLLKVLDALLRERSTTRAAARVGLSQPAVSAALGRLRAALGDELFLRRGQGL 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQIY 120 T ++E L E + LL P P F LA +++ L+ ++ Sbjct: 61 VATDFARALEAPLRETLDRLEDLLAAPQEFDPATAKRTFRLAGIDFFAEMLMPQLAARLA 120 Query: 121 QRYPQATIKLRNWDYDSLDA-ITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 P I+L N +A + R E D+ L+ P ++ +LF Sbjct: 121 AAAPGVRIQLLNLVPREYEATLERYEADVAL----------FPLTGSPEWAEHRLLFRSP 170 Query: 180 PCVWLRKDHPAL-----HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMS 234 + +P L T LD F HI + + D+ L +GR+R + MS Sbjct: 171 FVLAAAAGNPRLAHLAEGDTVPLDLFCDLGHILFSLDGNLRAMGDDALAAVGRQRRVVMS 230 Query: 235 LPEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLW 294 + F L A + + L + + L ALP+P + ++W Sbjct: 231 MASFPGILRAVAGSEAVSLVPV-QLARKLQGEMGLRCFALPMPLEPPV-------IGMMW 282 Query: 295 HKRNSHNPKIVWLRETIKNLYASM 318 H+R+S P WLRE I L + Sbjct: 283 HRRSSATPAHAWLREQIVELMTPL 306 >UniRef50_C6D0V7 Transcriptional regulator, LysR family n=4 Tax=Bacillales RepID=C6D0V7_PAESJ Length = 299 Score = 218 bits (557), Expect = 2e-55, Method: Composition-based stats. Identities = 46/315 (14%), Positives = 109/315 (34%), Gaps = 27/315 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L + + VT+AA+ ++VT S++SK++ +L LF L Sbjct: 5 MELLQLQYFLTVARLEHVTEAARHLHVTQSSLSKTIQRLEEDLGVLLFDRVGRKLRLNES 64 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQ-TPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + + + +P ELA ML + ++ ++ P Sbjct: 65 GSRFLLRAERALFELDQGKQELNDWSSPEQGTIELAVN---TASMLPNILREFRKKKPNI 121 Query: 127 TIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 ++ + + + RG++D S I+ ++++ D + + Sbjct: 122 QFHVQMLTTQEMVAHLHRGDIDFCLSSPPLEGE----------DIECQIMYRDAILLAVP 171 Query: 186 KDHPALHQ-TWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 + H + + +L + + +D++ ++ G E E + + Sbjct: 172 ESHRLAGRSSVSLPELKEEWFVGVKKGYGTRDLVDSICKKAGFEPKFVYEGDEPARINAL 231 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 + +A P + N + + E +L LLWHK + Sbjct: 232 VEAE--IGIAFIPGTARNSNGQ---------IAYLEIDNNELVREIALLWHKSRYVSRAA 280 Query: 305 VWLRETIKNLYASMA 319 R+ + N + +++ Sbjct: 281 QSFRKVVVNYFETLS 295 >UniRef50_B1ZUQ0 Transcriptional regulator, LysR family n=1 Tax=Opitutus terrae PB90-1 RepID=B1ZUQ0_OPITP Length = 301 Score = 218 bits (557), Expect = 2e-55, Method: Composition-based stats. Identities = 35/311 (11%), Positives = 91/311 (29%), Gaps = 21/311 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L + + T+AA+R NVT ++S+ + L LF T Sbjct: 1 MELYQLRYAVAVADTGNFTRAAERCNVTQPSLSQQIINLEKEVGHKLFHRLGRRAVLTEA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQAT 127 + + + + + + A + +L + + + P Sbjct: 61 GAVFIERARQIVYDVENAAKELSDHPSLDRRITVGAIQTVAPYLLLPMIEVCKRELPNLQ 120 Query: 128 IKLRN-WDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRK 186 I L + D + + G++D+ + E L ++ + + K Sbjct: 121 INLIEDFRVDLVHGVVEGDLDLAIVTLPVDDP----------RVSVEPLMTEPLLLVVGK 170 Query: 187 DHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMA 245 +HP + +++ +++ + + + + + + + Sbjct: 171 NHPFATRKEISINDLADETFVTMGESSTLAAQIRSFFGGHNFQPKVGYRCAQVATLKTLV 230 Query: 246 AQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIV 305 A L ++ PR Q L + L ++ H + + Sbjct: 231 A--MGLAISILPRVDQEEKDRETLTYLRL-------TGSAPTRELVVVRHLQRYQSRGAQ 281 Query: 306 WLRETIKNLYA 316 + + Sbjct: 282 QFLQLLHEQVR 292 >UniRef50_Q210Z5 Transcriptional regulator, LysR family n=2 Tax=Alphaproteobacteria RepID=Q210Z5_RHOPB Length = 301 Score = 218 bits (556), Expect = 2e-55, Method: Composition-based stats. Identities = 71/317 (22%), Positives = 136/317 (42%), Gaps = 23/317 (7%) Query: 1 MKKSITT--LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNS 58 M +S + LDLNLL+ L L+ E SV AA R+N++P A+S+ LA++R +DP+ V + Sbjct: 1 MTRSPSRQPLDLNLLVTLDALLSEGSVAGAANRMNLSPPAMSRQLARIRHLMNDPVLVRA 60 Query: 59 PLGLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALS 116 GL TP ++ + + +Q + L+ P F + + + A+ Sbjct: 61 GRGLVATPRAEAVRAQVRQLVQDAEGLVRGNADLDPATIERTFTIRSSDGFVGTFGAAIV 120 Query: 117 KQIYQRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLF 176 + + Q+ P A ++ + +D++ G VD+ ++ + I + LF Sbjct: 121 ELVVQQAPNARLRFVGEGNEDVDSLRDGRVDLDIG----------VIDGMGPEIRLQTLF 170 Query: 177 SDVPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLP 236 D +R DHP +T ++ F+ YPH+S+ +D L G RT+++++ Sbjct: 171 RDRYIGVVRADHPLAQETVTIENFVAYPHVSVSRRGRFEGPVDTALALQGMRRTVSVAVA 230 Query: 237 EFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHK 296 L + ++ D++ + R +Y + + + WH Sbjct: 231 NVADGLSIVSRSDHI-VLLPGRIAAWYRRDFHG------FELPVVTDELPPISI--AWHP 281 Query: 297 RNSHNPKIVWLRETIKN 313 R + WLR ++ Sbjct: 282 RFEKDAAHRWLRTCVRE 298 >UniRef50_Q4KHX1 Transcriptional regulator, LysR family n=1 Tax=Pseudomonas fluorescens Pf-5 RepID=Q4KHX1_PSEF5 Length = 308 Score = 218 bits (556), Expect = 2e-55, Method: Composition-based stats. Identities = 80/318 (25%), Positives = 140/318 (44%), Gaps = 21/318 (6%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 + +DLNLL+ L L+ E+ VT+ A R++++ A+S SL+KLR DDP+ + L Sbjct: 6 LRNIDLNLLVVLDALLTEKHVTRTALRLHLSQPAISHSLSKLRGLLDDPILIRRGSELVL 65 Query: 65 TPLMVSMEQNLAEWMQMSNLLLDKPHHQTPR--GLKFELAAESPLMMIMLNALSKQIYQR 122 + L +++Q L E + L K P F LA ++L L ++ + Sbjct: 66 SSLAQNIQQPLREILGQIETLFGKSIDFDPASSQRIFTLAMSDYGAALVLPNLMVRLRRD 125 Query: 123 YPQATIKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPC 181 P T+ + + +++G++D+ + +L I EVLF + Sbjct: 126 APNTTLVVTQDTRHGMFEQVSQGKIDLALG----------VFPNLSGDISTEVLFEETFS 175 Query: 182 VWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQS 241 L + T +LD++L PHI + + S +D++L++ G +R IA+S+P + + Sbjct: 176 CLLDRRTLPADGTLDLDSYLARPHILVSMDGSANGEVDSLLRDEGLQRRIAVSVPHWRTA 235 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 M D +L + + L PF +WH+R + Sbjct: 236 PSMIHNTDLILTVATRTLDEALLNQDLIQLR--------PPLPIPPFPFVQIWHQRFDNE 287 Query: 302 PKIVWLRETIKNLYASMA 319 P VWLRE +K + A A Sbjct: 288 PAHVWLREQVKQVVAHSA 305 >UniRef50_C9KJX6 Transcriptional regulator, LysR family n=2 Tax=Veillonellaceae RepID=C9KJX6_9FIRM Length = 302 Score = 218 bits (556), Expect = 2e-55, Method: Composition-based stats. Identities = 41/312 (13%), Positives = 93/312 (29%), Gaps = 25/312 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L Q+ + R++T+AA+R+ V+ ++ ++ KL A LF S L+ TP Sbjct: 1 MELRQLEYFQMASRLRNITRAAERLRVSQPNITVAIKKLEAELGIQLFDRSQKQLALTPE 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + ++ + + + ++ + + + +RY Sbjct: 61 GAVFLNRVELALRNIQDAVLEVNDYKQLQKGTIKIGVPPMMGAYLFPRIFSSFQRRYSHL 120 Query: 127 TIKLR-NWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 I + + + E+D G +LL I + Sbjct: 121 DIFMHEEASMSIREQLEHDELDFGIIILSGASNRLQLLPMSKNQI----------VCCVP 170 Query: 186 KDHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 P + +++ + + + +++ G I + + + Sbjct: 171 ASSPLAKKKAISMNDVADTKIVMLKEGSFLRQTILGRMKDEGITPNIVLESNQINTLKGL 230 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 A + + + L LPL V L W K + Sbjct: 231 VA--NGVGITFRLDMVADEMPG----LKTLPLADPIF------VDVGLAWKKDRYISKAA 278 Query: 305 VWLRETIKNLYA 316 + K+L Sbjct: 279 QSFIDFCKDLLK 290 >UniRef50_A1WRQ7 Transcriptional regulator, LysR family n=2 Tax=Burkholderiales RepID=A1WRQ7_VEREI Length = 299 Score = 218 bits (556), Expect = 3e-55, Method: Composition-based stats. Identities = 58/310 (18%), Positives = 100/310 (32%), Gaps = 21/310 (6%) Query: 7 TLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTP 66 + L L L + RS T AA+ VT SAVSK A+L + PLF S ++P Sbjct: 2 NITLKQLRVFCALYELRSFTAAARAAFVTQSAVSKLCAELESEVGQPLFERSTRSVTPCE 61 Query: 67 LMVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFE-LAAESPLMMIMLNALSKQIYQRYPQ 125 + + +AA +M +L ++ YP Sbjct: 62 GAADFYTYAQQILSTVRAAERSMSSLRSLERGIVGVAASPMVMYGLLGDPLASYHRNYPG 121 Query: 126 ATIKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 + L D ++ + G+VD+G E + +F D Sbjct: 122 IKLDLYELSTDETITYVRHGKVDMGIVSLEVKDA----------ELATRPIFRDFMYAVC 171 Query: 185 RKDHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 DHP + + +Y HI + + ++D + ++L + + L Sbjct: 172 TSDHPLAQEEKVSWSELAKYDHIGLHSAYNVRRSIDRICEQLHLDIHFKIEASMVTSVLG 231 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 M L + P Y + + L LV + K V L+ + Sbjct: 232 MVRS--GLGITVVPGYICDFARHLGLVLVEI------RGAPKYPVELWLVQRTATRPSLA 283 Query: 304 IVWLRETIKN 313 L E ++ Sbjct: 284 ASALLECVEQ 293 >UniRef50_B2JVU4 Transcriptional regulator, LysR family n=43 Tax=Proteobacteria RepID=B2JVU4_BURP8 Length = 322 Score = 218 bits (556), Expect = 3e-55, Method: Composition-based stats. Identities = 52/311 (16%), Positives = 106/311 (34%), Gaps = 22/311 (7%) Query: 7 TLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTP 66 DLN L + +++ S KAA+ +N++ A+S+ + KL LF + ++ T Sbjct: 4 NFDLNDLQAFRAVVELGSFRKAAEAVNISQPALSRRIDKLEEALGVRLFERTTRSVTLTT 63 Query: 67 LMVSMEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNALSKQIYQRYPQ 125 + + + + ++ L + +A + L ++R+P+ Sbjct: 64 VGRVFAPSAEQLLDDLDVALLGIRDVSSSRLGHVTIACVPSVAYYFLPGAVASYHRRFPR 123 Query: 126 ATIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 +K+ + D L A+ GE D G S + S +++++L + Sbjct: 124 IRVKILDSSANDVLAAVISGEADFGVSF----------MGSQEPDVEFKMLLQERFVAAC 173 Query: 185 RKDHPALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 R+DHP + + + ++S+ + LD L + L Sbjct: 174 RRDHPLARKKRVTWNELYEHEYVSVDKTSGNRLLLDQALGAVSPRMPSVCETRHVTTMLG 233 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 + L +A P H L V L P + + + P Sbjct: 234 LVEA--GLGVAAVPSMAMPGRNHHILTSVPLVEPVVKRRVGIVRRR-------GRPLTPA 284 Query: 304 IVWLRETIKNL 314 +TI + Sbjct: 285 AQEFHKTIVEM 295 >UniRef50_Q88I06 Nodulation protein d1 n=4 Tax=Gammaproteobacteria RepID=Q88I06_PSEPK Length = 312 Score = 217 bits (555), Expect = 3e-55, Method: Composition-based stats. Identities = 69/317 (21%), Positives = 139/317 (43%), Gaps = 21/317 (6%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 LDLNLL+ L +L++E+++T+AA+R+++T SA S L +LR +F+D L V + Sbjct: 1 MRFHHLDLNLLVALDILLEEQNITRAAERLHMTQSATSGVLGRLRTFFEDELLVQVGRKM 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDK--PHHQTPRGLKFELAAESPLMMIMLNALSKQIY 120 PTP + + + + E + + F L A L+ ++ + ++I+ Sbjct: 61 QPTPYALELAKPVREVLLTIRASITAKPVFDPAASKRHFRLVASDYLISVVFAQVIQKIH 120 Query: 121 QRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 Q PQ T ++ S + + RGEVD+ L ++LF + Sbjct: 121 QEAPQITFEMIGPGDSSAELLMRGEVDMMIVPE----------RYLIEGHPAQLLFEEDH 170 Query: 181 CVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVL-QELGRERTIAMSLPEFE 239 + +D+P + + L+ +++ HIS+ + ++ ++++ + G R + + +F Sbjct: 171 VCVVWRDNPEVGEHLTLEQYMQMGHISVGFGRNRHLSIEDWFMNQYGFNRRLEVITNDFN 230 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 + + R + Y L L+ P+ ++ +LWH+ Sbjct: 231 TLPQLLVGTVRVA-TMHRRLAELYAGYLPLRLLPPPVKIPVMRE-------FMLWHRSMD 282 Query: 300 HNPKIVWLRETIKNLYA 316 +P WLRE I ++ Sbjct: 283 GDPMHRWLRERISDVIQ 299 >UniRef50_Q5LN55 Transcriptional regulator, LysR family n=4 Tax=Rhodobacterales RepID=Q5LN55_SILPO Length = 331 Score = 217 bits (555), Expect = 3e-55, Method: Composition-based stats. Identities = 79/326 (24%), Positives = 125/326 (38%), Gaps = 28/326 (8%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 + T DLNLL L L+ RS T+A +++ ++ AVS +L++LR DPLF+ L Sbjct: 1 MNFRTFDLNLLRVLDALLSTRSTTRAGQQLGMSQPAVSAALSRLRHALGDPLFIRQGRQL 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGLK--FELAAESPLMMIMLNALSKQIY 120 PT + L + + + LL P L+ +++ L++ + Sbjct: 61 VPTDYAGGLHAPLRDLLGQTEALLAGQPDFDPGAATDSLTLSGSDFYAELLMPRLARHLS 120 Query: 121 QRYPQATIKLRNWDYDS-LDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 P ++L + D+ + ++ + VD+ P ++ L S Sbjct: 121 HVAPGMRVQLVDLVPDNYVQSVGQSAVDMAILPATPT----------PDWVEERRLHSSH 170 Query: 180 PCVWLRKDHP-------ALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIA 232 R DHP A LD F H E D L +GR R + Sbjct: 171 FLAVARADHPEIASAAIAPGAVLPLDLFCSLQHALFSPEGKLHGLGDAALARIGRARQVT 230 Query: 233 MSLPEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTL 292 M+LP F L +Q D + L + + L L P+P V + Sbjct: 231 MTLPVFSGVLNAVSQSDLIAL-IPHQLAESVAPRLGLSLYHPPIPV-------GPVEIMM 282 Query: 293 LWHKRNSHNPKIVWLRETIKNLYASM 318 +WHKR S P WLR+ I L A + Sbjct: 283 VWHKRASTAPAHRWLRDQIAMLMAEL 308 >UniRef50_Q4ZQQ6 Regulatory protein, LysR:LysR, substrate-binding n=10 Tax=Pseudomonas RepID=Q4ZQQ6_PSEU2 Length = 304 Score = 217 bits (555), Expect = 3e-55, Method: Composition-based stats. Identities = 41/307 (13%), Positives = 91/307 (29%), Gaps = 23/307 (7%) Query: 10 LNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMV 69 L + L + + T+AA+ ++V+ A+S+ + +L + LF + + PT Sbjct: 15 LRHIRYLLAVADHGNFTRAAEALHVSQPALSQQIRQLESSLGVQLFDRTRRSVVPTDAGR 74 Query: 70 SMEQNLAEWMQMSNLLLDKPHHQ-TPRGLKFELAAESPLMMIMLNALSKQIYQRYPQATI 128 + + + + + L ++ L + YP I Sbjct: 75 VYLDHARRCLLELDAGKRALNDVSDLSRGQLRLGVTPTFSEYLIAPLIDRFSALYPGVAI 134 Query: 129 KLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKD 187 L + + +A+ +D+ SH + ID + LF + C+ + K Sbjct: 135 ILTELPLEQITEALISDALDLAIGFAGSHA----------VEIDSQPLFDEQLCLVMAKP 184 Query: 188 HPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQ 247 L+ + + LD Q + I + L + AQ Sbjct: 185 ASEKQAALTLEDLQALRFALLAPGFATRQLLDAWCQMQNFKPIIGLEANSIAILLKVVAQ 244 Query: 248 PDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWL 307 + + L ++ + LL K + Sbjct: 245 GRMATI-LPDAIVRKQPGLCEVQTIP----------ALPGRTVALLRRKNGYQSAAAKAF 293 Query: 308 RETIKNL 314 + + ++ Sbjct: 294 AKLVSDI 300 >UniRef50_A6CYZ8 Hypothetical transcriptional regulator, LysR family protein n=1 Tax=Vibrio shilonii AK1 RepID=A6CYZ8_9VIBR Length = 304 Score = 217 bits (555), Expect = 3e-55, Method: Composition-based stats. Identities = 77/312 (24%), Positives = 135/312 (43%), Gaps = 22/312 (7%) Query: 9 DLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLM 68 +LNLL L++L+ E+ V++AA+R+N+T SAVS+ L++LR + DPL V + TP Sbjct: 6 NLNLLYTLEVLLAEKHVSRAAERLNLTQSAVSRQLSQLRDIYHDPLLVRNGNHYVLTPRA 65 Query: 69 VSMEQNLAEWMQMSNLLLDKPHHQTPR--GLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + L + Q +L + P F ++ + +L L + + P Sbjct: 66 ERLGAELEDLFQNITKVLGQA-DFDPLLFDQTFTFSSSDYVAQYILPELVELLSSLAPTM 124 Query: 127 TIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRK 186 R W+ D+L ++ E+D+ + +L PL + + + D+P + RK Sbjct: 125 QFAYRLWEPDNLAKLS--EIDV--------QLASTMLPEAPLGLSSQQIGEDIPVIVTRK 174 Query: 187 DHPALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMA 245 +HP +T YPHI I LD ++ +R I +S P F + + Sbjct: 175 NHPLSGTKTITEQELGAYPHIRISGGGDKDSFLDREMKARSLKRRILVSTPFFSSAFALL 234 Query: 246 AQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIV 305 Q D LL + +L ++ +P + L+WH + H P + Sbjct: 235 QQTDALL-TVPLHIAVNLKKTQKLHVIDIPFTVPT-------YKYWLIWHPKYDHEPAHI 286 Query: 306 WLRETIKNLYAS 317 W RE + ++ S Sbjct: 287 WTREHVLSIMRS 298 >UniRef50_C4Z2A4 LysR family transcriptional regulator, transcription activator of glutamate synthase operon n=1 Tax=Eubacterium eligens ATCC 27750 RepID=C4Z2A4_EUBE2 Length = 299 Score = 217 bits (554), Expect = 4e-55, Method: Composition-based stats. Identities = 40/312 (12%), Positives = 96/312 (30%), Gaps = 27/312 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +++ L L + R TKAA+ + +T ++S +++++ LF + ++ T Sbjct: 1 MNIYNLRYFVTLARIRQYTKAAEELCITQPSLSHAISQMEKELGVKLFEKNGHKITLTQF 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQAT 127 + + + + + L PL + + ++ ++ P+ Sbjct: 61 GEEFLSYAEKTLDVLDDGIASIKRSAMGNGTIRLGLVRPLGISYVPRMAAAFIKKNPKLD 120 Query: 128 IKL---RNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 I + LD + G+ D+ F + S E + + Sbjct: 121 IDFTFHTDVTGRLLDDMQLGKYDLLFCSKPSEE----------YHFTAEPVMKQRLVLIT 170 Query: 185 RKDHPALHQT---WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQS 241 K HP + NL Y ++ D +L+ +A E + Sbjct: 171 PKGHPLAKKRKRSINLAETAGYSYVCFDKNSGIRSIFDEMLKRSDITVKVAYETEEDQVI 230 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 + A + + + + + E + + E F ++ + Sbjct: 231 AGLVASGFGIAVVPYMDILEKMS-----------VEIFEIESPEYERSFYMVNDNSTYMS 279 Query: 302 PKIVWLRETIKN 313 P + R + Sbjct: 280 PAVETFRNFVIE 291 >UniRef50_B5JUQ0 Transcriptional regulator, LysR family, putative n=1 Tax=gamma proteobacterium HTCC5015 RepID=B5JUQ0_9GAMM Length = 300 Score = 217 bits (554), Expect = 4e-55, Method: Composition-based stats. Identities = 58/317 (18%), Positives = 120/317 (37%), Gaps = 21/317 (6%) Query: 1 MKKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPL 60 MK ++ ++DLNL + +M++ S+ AA + ++ A S +L +LR D LFV + Sbjct: 1 MKLNLRSVDLNLFPVFEAIMEQGSLNMAACHLGMSQPAASAALKRLRLTIKDELFVRTRR 60 Query: 61 GLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPR--GLKFELAAESPLMMIMLNALSKQ 118 GL PT + + + ++ +++ + P F++A M+ + L Sbjct: 61 GLEPTARALELYPVVHHLLESLRGEMERANQFDPLFCERIFKVAGGDYFDMVFMGRLMNM 120 Query: 119 IYQRYPQATIK-LRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFS 177 + + P+ ++ + + +SL+ I RG++D+ + + LF Sbjct: 121 LRESAPKVQVESVIHGFQESLNLIQRGKLDLCLHYD----------KEIAHELPTLKLFE 170 Query: 178 DVPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPE 237 + V + DHP + +L ++ H+ + + LD +L R + + Sbjct: 171 ESMSVLMAADHPYADKQLSLSDYIALEHVVLPKLSGNANQLDVILGGFNENRCVRARVSS 230 Query: 238 FEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKR 297 + Q + R + + L P +P L W Sbjct: 231 VSSMVMAIKQSYLIG-TIPTRMASILCEGYDLVFKPFPKEAP-------PIPIYLSWAPF 282 Query: 298 NSHNPKIVWLRETIKNL 314 + + W R I +L Sbjct: 283 SDKDSVHRWFRNMIASL 299 >UniRef50_A0KIB7 Transcriptional regulator, LysR family n=2 Tax=Aeromonas RepID=A0KIB7_AERHH Length = 303 Score = 217 bits (554), Expect = 4e-55, Method: Composition-based stats. Identities = 69/307 (22%), Positives = 129/307 (42%), Gaps = 20/307 (6%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 ++ +DLNLL+ L+ L++ER+ TKAA+R+ ++ AVS++LA+LR +DDPL + +P G+ Sbjct: 1 MNLRGVDLNLLVVLKALLEERNTTKAAERLAMSQPAVSRALARLRLLYDDPLLIRTPQGM 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQIY 120 PT ++ L E + P P + A + + +M+ +L ++ Sbjct: 61 EPTARAEALLLPLREILHDIEQTFSPPEQLDPAQFEGVLRIGAHTYVEYVMMPSLLARLQ 120 Query: 121 QRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 Q+ P I + + D + G + + S +P LF D Sbjct: 121 QQAPNLRIHMVPLNADYESQLDEGVISMVIS----------KQDEVPGRFRRIPLFEDKL 170 Query: 181 CVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQ 240 + HP Q +++F + H+ + S+ +D++L G R + + F Sbjct: 171 ICAAHRSHPLQGQVLCIESFAQAQHLLVAPRGSEGGIVDDLLAAHGMTRHTPLIVQSFLA 230 Query: 241 SLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 + F+ LLL + R + L L +L+ H+R+ + Sbjct: 231 APFILP-CAPLLLTSPARVLRPLMPLLDLVEYETRFALPT-------FEVSLIRHRRDDN 282 Query: 301 NPKIVWL 307 N + W Sbjct: 283 NAMLNWF 289 >UniRef50_Q9RBI3 SalR n=2 Tax=Acinetobacter RepID=Q9RBI3_ACIAD Length = 296 Score = 217 bits (554), Expect = 4e-55, Method: Composition-based stats. Identities = 62/314 (19%), Positives = 135/314 (42%), Gaps = 21/314 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +DL+L+ + + ++++KAA+ +N++ +V+ +L +LR ++PLF + G+ T L Sbjct: 1 MDLSLIRIFICVYENKNISKAAEILNLSQPSVTYNLNRLRKHLNNPLFERTQYGVEATKL 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQIYQRYPQ 125 + E + + +D+ + P F + + +L L + + P+ Sbjct: 61 SHELYPVFKESILKIEIAVDEALNFNPLTSNKTFRIGLSDIGEICLLPTLIEYLRAHAPK 120 Query: 126 ATIKLRNWDYDSLD-AITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 I++ D ++ + G +D+ ++YE LF + + Sbjct: 121 IKIEVEEIKIDQVEKWLIEGFIDVAV---------FNSTHLEFKHLEYETLFLERYVALV 171 Query: 185 RKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 +HP + T + D +L H++I + +D+VL+ +G +R IA+ +P F + Sbjct: 172 NMNHPRIRSTLSFDAYLNESHVAI-KSSTGHTQVDHVLKLMGHQRKIALEVPHFGVLQGV 230 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 + D L++ R Q Y + ++ LP + E L W + + Sbjct: 231 LDKTD-LMVTLPSRAAQQYLNQSHVRVLELPF-------QMSEFYVGLHWFAQTNEPLAR 282 Query: 305 VWLRETIKNLYASM 318 +WL +T K + + + Sbjct: 283 IWLIQTCKKVISVL 296 >UniRef50_B9XBB1 Transcriptional regulator, LysR family n=2 Tax=Verrucomicrobiales RepID=B9XBB1_9BACT Length = 299 Score = 217 bits (554), Expect = 4e-55, Method: Composition-based stats. Identities = 38/312 (12%), Positives = 88/312 (28%), Gaps = 26/312 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L + + +E S +AA+R+++ +S + L LF + + T Sbjct: 1 MELRHIRYFVAVAEELSFRRAAERLHLAQPPLSAQIKDLEGELGTKLFERTTRSVRLTAS 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQT-PRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + + + +P L + + ++P Sbjct: 61 GRVFLDEARAVLAAAEKAEQRVRKAEHGLVGTLRIGVLAPTATSRLATILRSYRNQFPGV 120 Query: 127 TIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 L + L ++ ++D+G +D+ L + + Sbjct: 121 QFSLHEMTSVEQLQSLRLDQLDVGLLRPPVAFP----------ELDFHFLEESPMVLAVP 170 Query: 186 KDHPALHQT-WNLDTFLRYPHISICWE--QSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 H Q F P + I N+ + G + + + Sbjct: 171 AGHRLAKQRLIEWKDFHNEPMVMIHPSLQHGYYDTFLNLCAKAGSTPIVGQYANDVHSKM 230 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 ++ + + T + L LP Q ++W KR +++P Sbjct: 231 WLISAGFGVAPTT---KTIAEVKRPGLVFRELPPGLPLVQTL-------IVW-KRTNNSP 279 Query: 303 KIVWLRETIKNL 314 + E L Sbjct: 280 MVGNFIECFSKL 291 >UniRef50_C6PMR8 Transcriptional regulator, LysR family n=1 Tax=Clostridium carboxidivorans P7 RepID=C6PMR8_9CLOT Length = 297 Score = 217 bits (553), Expect = 5e-55, Method: Composition-based stats. Identities = 41/304 (13%), Positives = 106/304 (34%), Gaps = 21/304 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++++ L + L + +S +KAA+ ++++ S++SK ++KL LF + + T Sbjct: 1 MNIDTLKYVLALAEYQSYSKAAEEMHISQSSLSKQISKLEGELGVKLFDRTTRHICLTVA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQ-TPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 ++ A+ + + + + + + L +L ++YP Sbjct: 61 GSEFLRHAAKILNDIDEAEKAMQEYCIIQRGELVIGTIPVICYFGLASLIVSFQKKYPGI 120 Query: 127 TIKLRNWDYDSLDAITRG-EVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 +KL+ + L + + ++D F + + +D + Sbjct: 121 KLKLKEAETKLLIQLRKNLKIDAAFVTFTDDTELNST-------FELFPIITDHIVLVTP 173 Query: 186 KDHPALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 + HP ++ + +S+ T N ++ G I + + Sbjct: 174 QFHPLAAYKSVDFKDIANEKFVSMTNNSLATEIFINACKKAGFTPDIVYESDHIDMIVGF 233 Query: 245 AAQPDNLLLATA-PRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 L ++ + + + + + + +V L +K+ + L K N+ P Sbjct: 234 V--SGGLGVSLLTSQIAKKFTKGNNIKIVNL--------NEKINITIALAIPKENNLTPG 283 Query: 304 IVWL 307 I Sbjct: 284 IRTF 287 >UniRef50_Q7NT25 Probable transcription regulator protein n=1 Tax=Chromobacterium violaceum RepID=Q7NT25_CHRVO Length = 310 Score = 217 bits (553), Expect = 5e-55, Method: Composition-based stats. Identities = 70/310 (22%), Positives = 121/310 (39%), Gaps = 20/310 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 L+LNLL L+ L++ R++T++A R+ +T SA+S+ L +LRA F DPL + T Sbjct: 5 LNLNLLRSLEALLETRNLTRSAARLGLTQSAMSRHLVQLRAQFQDPLLLREGQRFVLTER 64 Query: 68 MVSMEQNLAEWMQMSNLLLDKP-HHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + L ++ L P + +F A L ML + ++ + P Sbjct: 65 AEELRLGLKAVLEQVEQLYQPPQFDPSACEREFSFAGSDYLAEYMLPDILDRVLPQAPGM 124 Query: 127 TIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRK 186 +K W D ++ G D+ + +P I + L D P + Sbjct: 125 RLKFIPWQAGRFDLLSDGAADLI----------STIADEVPDNIYGKSLGQDQPMCVMAD 174 Query: 187 DHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMA 245 +HP + D +L +PH + +D L G R I ++ P F +L + Sbjct: 175 NHPLHDKPALERDDYLAWPHARVSSASDKDGFVDIQLARNGLSRQIRIATPYFVSALSIV 234 Query: 246 AQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIV 305 ++ LLL + + + LP + LLWH R +P Sbjct: 235 SRSQ-LLLTLPEHLAVRFQRQFPVRAKPLPF-------IDYTYRYWLLWHGRADKDPAHR 286 Query: 306 WLRETIKNLY 315 W R + ++ Sbjct: 287 WFRGHVFDVL 296 >UniRef50_A6SW66 Transcriptional regulator, LysR family n=1 Tax=Janthinobacterium sp. Marseille RepID=A6SW66_JANMA Length = 289 Score = 217 bits (553), Expect = 5e-55, Method: Composition-based stats. Identities = 43/311 (13%), Positives = 95/311 (30%), Gaps = 25/311 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L Q +S T+A++ +++T +S + ++ LF + T Sbjct: 1 MELRHLRYFLAAAQSQSFTRASESLHITQPTLSHQIKQIEDELGIQLFDRVGRVVKLTTA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + + LD + + S L + + YP Sbjct: 61 GELFQVYAKRALLEVDAGLDALNELENLKHGRVTFGVLSSFGTFHLPPILADFNKVYPGI 120 Query: 127 TIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 I + + + + G++ G + S I+ E LF+ + + Sbjct: 121 KITVLRLRSGEIEERLLDGDLHFGVAYAPSSTEQ----------INVEPLFTVPLALVVG 170 Query: 186 KDHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 HP + L+ + + + E + +D +L G I M + E L Sbjct: 171 DHHPLVGSAGITLNELNEHELVMLSDEYNSRKMMDAILLANGITPRIVMEMNAIEPILAT 230 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 + +++ L V L + L + + + Sbjct: 231 VRHSSLATIL----SANLVDEMPGLHQVPL--------TPTVTHTVGLFTRRNSHLSAAA 278 Query: 305 VWLRETIKNLY 315 L +TI+ + Sbjct: 279 RALVDTIRQRF 289 >UniRef50_B8FPA0 Transcriptional regulator, LysR family n=4 Tax=Clostridiales RepID=B8FPA0_DESHD Length = 295 Score = 217 bits (553), Expect = 6e-55, Method: Composition-based stats. Identities = 47/304 (15%), Positives = 96/304 (31%), Gaps = 23/304 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +++ L + +++S +KAA++ +VT S +SK + L LF + + T Sbjct: 1 MEIKHLEYFVEVARQKSFSKAAEKCHVTQSTISKLIKDLEGELGTSLFNRTSKYVQLTDT 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPH-HQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 E + L + K + + L + ++YPQ Sbjct: 61 GAIFLDQALEIVTKFENLTHEFQNRIKLERGKIAIGLLPITGTTLFAELLGEFKKKYPQI 120 Query: 127 TIKLRN-WDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 I L + I G +D+G + + D V + Sbjct: 121 EISLSERGSKKVIMDILDGTLDVGVVCSVPDSQY----------FESFAFAEDPLYVIVS 170 Query: 186 KDHPALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 +P + +L + P + E S + + + G I +FE M Sbjct: 171 VRNPISKLASIDLKSLADEPFVLYSSEFSLHDEIISKCKNEGFAPNIIFETSQFELMTQM 230 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN-PK 303 A L +A P + ++ + ++ ++W + S + Sbjct: 231 VAAD--LGIAFLPGAACREMDPRRFAVIPV-------TNPQIIHQMFIIWKRGRSMSHAA 281 Query: 304 IVWL 307 +WL Sbjct: 282 NLWL 285 >UniRef50_C1PEC2 Transcriptional regulator, LysR family n=1 Tax=Bacillus coagulans 36D1 RepID=C1PEC2_BACCO Length = 304 Score = 217 bits (553), Expect = 6e-55, Method: Composition-based stats. Identities = 51/317 (16%), Positives = 107/317 (33%), Gaps = 21/317 (6%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 + ++L L+ + + VT AA ++V SA+S+ ++ L A LF + Sbjct: 1 MIRMELRQLIYFIEVAKREHVTHAADELHVAQSAISRQISLLEAELGVSLFWREGRNVRL 60 Query: 65 TPLMVSMEQNLAEWMQMSNLLLDKPHHQ-TPRGLKFELAAESPLMMIMLNALSKQIYQRY 123 TP+ ++ + + + + H P L + L + ++L Q +++ Sbjct: 61 TPIGKVFLEHAEKVVLEIDKAKQRMHEFLDPDNGTVRLGFSTGLSVQTFSSLLAQFREKH 120 Query: 124 PQATIKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCV 182 P + + I GE+++ + A+ E+L+ + + Sbjct: 121 PGLEYQFVQGTPSYLIRLIENGELELALASPVPDD---------HPAVSGEILYMEKLML 171 Query: 183 WLRKDHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQS 241 R+DHP Q L I+ S L ++ G E IA + E Sbjct: 172 LFRRDHPLSGQKMIRLAQLKNERFITFREGFSIREILFAACRKSGFEPAIAFEGEDMETI 231 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 + A + + P ++ + E +L P ++ K+ Sbjct: 232 KGLVASGTGVAILPEPALLFNLSEE---------IVKAEISDMELMRPVGVMIPKKREMA 282 Query: 302 PKIVWLRETIKNLYASM 318 L + + Y + Sbjct: 283 ASEKALYTFLTSFYDRL 299 >UniRef50_A5VCH0 Transcriptional regulator, LysR family n=1 Tax=Sphingomonas wittichii RW1 RepID=A5VCH0_SPHWW Length = 327 Score = 217 bits (553), Expect = 6e-55, Method: Composition-based stats. Identities = 74/335 (22%), Positives = 134/335 (40%), Gaps = 40/335 (11%) Query: 4 SITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLS 63 +LDLNLL L +E SVT AA + +TPSAVS SL +LR D LF+ G++ Sbjct: 5 HFRSLDLNLLRVFDALTEEGSVTGAAGLLGLTPSAVSHSLNRLRHILKDDLFLRGAKGMN 64 Query: 64 PTPLMVSMEQNLAEWMQMSNLLLD-KPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQR 122 PTP +++ + + L+ +F +A + +++ + + + Sbjct: 65 PTPKALALAVPIRRALVDIQQALNGDSFVPEKTDRRFSIACGDYVTAVLMPEVIARFRKA 124 Query: 123 YPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCV 182 P A ++++ + + G +D+ G +P + E LF+D Sbjct: 125 APLAELRIQPVGA-VMKELDAGRIDLAMGG----------FERIPERLASEPLFADDMVW 173 Query: 183 WLRKDHPALHQTWNLDTFLRYPHISICWEQSDT--------------------WALDNVL 222 +R D P ++ L+ PH++I +D LD Sbjct: 174 VMRADSPFANRQPTLEGLAALPHLAIASPDNDRAVSGIVSDAGLERRVVRDDPRILDQYF 233 Query: 223 QELGRERTIAMSLPEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQ 282 +E G RT+AM+ P ++ + A+ D L + + ++L L P P Sbjct: 234 EERGLRRTVAMTAPNPIVAMAIVAECD-LAAMMPRNLAEAFADRYKLALWKPPHP----- 287 Query: 283 QKKLEVPFTLLWHKRNSHNPKIVWLRETIKNLYAS 317 + +WH+ + P + WLR I+++ Sbjct: 288 --SALFQISTVWHRWHGDQPAVDWLRAMIRSVAEE 320 >UniRef50_P52679 PCP degradation transcriptional activation protein n=1 Tax=Sphingobium chlorophenolicum RepID=PCPR_SPHCR Length = 307 Score = 216 bits (552), Expect = 6e-55, Method: Composition-based stats. Identities = 75/317 (23%), Positives = 130/317 (41%), Gaps = 23/317 (7%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 + + L L L+ L + S KAA +++ +S+ LA+LR FDDPLFV + G+ Sbjct: 1 MNDSVLPLGHLMVFDALYRHGSAGKAAHALSMPQPTLSRWLAQLRTHFDDPLFVRTRSGM 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQIY 120 PTPL ++AE + + + P F +AA +ML L + Sbjct: 61 EPTPLAARAAPHIAEMIAIYRQHVRSELRFDPGTSNRNFRIAASDFGQALMLPRLYATLE 120 Query: 121 QRYPQATIKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 + PQ + N + ++ + G +DI F G +L I + LF + Sbjct: 121 ETAPQVRVTGVNLRHGPLVEELESGSIDIAFGG----------FPTLSAGIKTQTLFREE 170 Query: 180 PCVWLRKDHPALHQTWNLDTFLRYPHISICWE--QSDTWALDNVLQELGRERTIAMSLPE 237 +R+ HPAL +L+ F + HI + ++ L EL +I + Sbjct: 171 YVCVMRQSHPALTHGLDLEAFRQCRHIIVTAHEFNHVHEQVEARLLELLPPESIRFTTEN 230 Query: 238 FEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKR 297 F S +A + D ++L R +++ L + +P+ + WH+R Sbjct: 231 FLVSAVIAEETD-VILTIPSRLARWFANRGGLTIFPVPIELP-------SIEVKQYWHER 282 Query: 298 NSHNPKIVWLRETIKNL 314 +P +WLR I + Sbjct: 283 YDKDPGNIWLRRVIAKI 299 >UniRef50_A3VWI6 Transcriptional regulatory protein n=1 Tax=Roseovarius sp. 217 RepID=A3VWI6_9RHOB Length = 314 Score = 216 bits (552), Expect = 6e-55, Method: Composition-based stats. Identities = 65/311 (20%), Positives = 130/311 (41%), Gaps = 21/311 (6%) Query: 9 DLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLM 68 DLNLL ++M ER++T+AA R+N+T +VS ++ +LR D LF+ G+ PT Sbjct: 8 DLNLLRIFHVVMLERNMTRAAARLNMTQPSVSNAIQRLREVLADDLFIKVSGGVVPTAKA 67 Query: 69 VSMEQNLAEWMQMSNLLLD-KPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQAT 127 ++ + +Q +D + + F +A + ++ ++ ++ P + Sbjct: 68 EAIWPTIRNSIQSLIQTIDPERFEPSVATDSFRIAMSDFVATQLILPVAGPLFNAAPHVS 127 Query: 128 IKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRK 186 + L D + + G+ D+ ++ I +L + +RK Sbjct: 128 LVLCQNSVDNIVPGLIDGQFDMA----------AGVIPYKEARIRSILLKTLTYVCAMRK 177 Query: 187 DHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAA 246 DHP + F+ H+ + + +D L + G R IA+++ + + + + Sbjct: 178 DHPLAKEPLTFADFMAARHLQVSL-SGRSGFIDRYLTDRGMFRDIALTIRHYTLAPEILS 236 Query: 247 QPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVW 306 D + + + +Q L A P+P E +LLWH+RN P W Sbjct: 237 STDLIAI-LPSEVISHSHQYDLLKTTAPPIPVYED-------SISLLWHERNDAMPAHRW 288 Query: 307 LRETIKNLYAS 317 +RE + ++ + Sbjct: 289 MRERLIDIVKA 299 >UniRef50_A3X6E2 Transcriptional regulatory protein n=1 Tax=Roseobacter sp. MED193 RepID=A3X6E2_9RHOB Length = 303 Score = 216 bits (552), Expect = 7e-55, Method: Composition-based stats. Identities = 62/321 (19%), Positives = 116/321 (36%), Gaps = 24/321 (7%) Query: 1 MKKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPL 60 M LD L L+L+ S ++AA+ + VT S +S ++ +LR F DPLFV Sbjct: 1 MNPDPFALDFASLRTLRLVYAHGSFSRAAETLGVTQSTISYTMTRLREVFSDPLFVRQGT 60 Query: 61 GLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMM--IMLNALSKQ 118 G+ PT + + E + L P E+ +L +++ Sbjct: 61 GMVPTERCGEIVSQVGELIDRFE-TLTAQREFDPAEASVEIGLSCNFYERVTILPHVTRI 119 Query: 119 IYQRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSD 178 + + P +K+ + + R E DI + L + Sbjct: 120 LRREAPGIKLKVISSSAQGKQQLLRSESDILIGP----------IRIDDSGYYRRSLLRE 169 Query: 179 VPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEF 238 + + +P + +++ F++ P + I + V++ G M +P Sbjct: 170 EYTCVMDRSNPLAEGSLSVEDFVKAPQVVINYGGGFRSRFLVVMEAAGHVPNTVMEVPSP 229 Query: 239 EQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRN 298 + AQ D +AT P +Q+ +V++P PF E+ L W R Sbjct: 230 ANLPDLLAQTDM--IATVPF---RISQMFDDRVVSVPCPFPA------ELSIDLYWTART 278 Query: 299 SHNPKIVWLRETIKNLYASMA 319 + W+R I + ++ Sbjct: 279 HVSAPHKWVRSKIAEAASRLS 299 >UniRef50_B9TDR3 HTH-type transcriptional regulator xapR, putative n=1 Tax=Ricinus communis RepID=B9TDR3_RICCO Length = 301 Score = 216 bits (552), Expect = 8e-55, Method: Composition-based stats. Identities = 49/309 (15%), Positives = 105/309 (33%), Gaps = 19/309 (6%) Query: 7 TLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTP 66 ++DL L + +E+S ++AA+R++++ +S+ + KL + LF + T Sbjct: 2 SIDLKQLKYFLAVAEEKSFSRAAERLHISQPPLSQQIMKLESELGVKLFARTTRTFELTV 61 Query: 67 LMVSMEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNALSKQIYQRYPQ 125 ++ A+ + + +D + + M + +L ++ ++P+ Sbjct: 62 AGKALMSEAADLLARMRMTIDTIRQIDRGEVGRLRVGIVGSAMWGPIPSLLEEFQTKFPR 121 Query: 126 ATIKLRNWDYDS-LDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 T L +A+ +VD+GF + E+ F + CV + Sbjct: 122 VTWTLHEMGPTLQYEALRAKQVDVGFWREPRIDDDVL----KNDNLRQELCFREDVCVAI 177 Query: 185 RKDHPALHQT-WNLDTFLRYPHISICWE-QSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 + HP Q L P +++ + S L + G + TIA E + L Sbjct: 178 NEHHPLAKQEAIELMDIAEEPMLTLALDKSSFPRYLMQCCVQAGFQPTIAQEATEPQTLL 237 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 M L +A P + + F + + + P Sbjct: 238 AMV--GAGLGVALMPETTS--------RIGWPGVVFVPIRSNPPSANLYITY-TTQDDAP 286 Query: 303 KIVWLRETI 311 + + Sbjct: 287 VVRAFLNIL 295 >UniRef50_UPI0000383CFA COG0583: Transcriptional regulator n=1 Tax=Magnetospirillum magnetotacticum MS-1 RepID=UPI0000383CFA Length = 329 Score = 216 bits (551), Expect = 8e-55, Method: Composition-based stats. Identities = 80/318 (25%), Positives = 131/318 (41%), Gaps = 25/318 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 LD+ + L +L+ E +V++AA+R+ VS +L +LR DPL V L PT Sbjct: 9 LDVRAMRTLLVLLTECNVSRAAERLGQAQPTVSLALKRLREMLGDPLLVRYGGSLVPTER 68 Query: 68 MVSMEQNLAEWMQMSNLLL--DKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQ 125 + ++ +L + + L F LAA + L + L L + I + P Sbjct: 69 GLDLKVSLEAILSEIDARLTPHPTFDPAHSDRTFRLAANNCLGSVFLPPLVRTIRRAAPG 128 Query: 126 ATIKL--RNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVW 183 T+++ D L + G +D P + L S Sbjct: 129 VTVEVGQTPPMEDLLRQMAEGAIDAVIGNWPQP----------PSHLRISTLLSTDIVCV 178 Query: 184 LRKDHPALHQ--TWNLDTFLRYPHISICWEQSDT-WALDNVLQELGRERTIAMSLPEFEQ 240 +R +H + +L FL H+S +++ +D L ELG +R IA+++PE+ Sbjct: 179 MRPNHRLARREGRIDLADFLAEGHLSPTSDRNAQLSPIDGRLIELGLKRRIAVTVPEYAM 238 Query: 241 SLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 +M AQ D LL T + + Q LV P + F +LWH H Sbjct: 239 VPYMLAQSD-LLFTTGRHFAEQIAQSFAFSLVDAPEEL-------GRMSFYMLWHDCKHH 290 Query: 301 NPKIVWLRETIKNLYASM 318 +P WLR TI+++ A + Sbjct: 291 SPAHAWLRRTIRSVAADI 308 >UniRef50_A2SDX3 Transcriptional regulator, LysR family n=6 Tax=Burkholderiales RepID=A2SDX3_METPP Length = 326 Score = 216 bits (551), Expect = 9e-55, Method: Composition-based stats. Identities = 79/324 (24%), Positives = 130/324 (40%), Gaps = 27/324 (8%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 ++L+L+ L ++ ERSV++AA R+ T AVS L +LRA DPL V S G++P Sbjct: 7 FDKIELHLVRVLHTVITERSVSRAALRLRTTQPAVSAQLKRLRALVGDPLLVRSGTGMAP 66 Query: 65 TPLMVSMEQNLAEWMQMSN-----LLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQI 119 T + + + + AE ++ + F +AA L L AL ++ Sbjct: 67 TAVALQLLEPAAELLRNAERLFGSRAEALAFDPAHSETTFRVAASDYLDPQFLPALVTRL 126 Query: 120 YQRYPQATIKLRNWDY--DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFS 177 P +++ D + RGEVD+ P + L S Sbjct: 127 RAEAPGIRVEVLPLSAEFDYRKGLARGEVDLVIGNWLRP----------PAELHLGRLLS 176 Query: 178 DVPCVWLRKDHPALH--QTWNLDTFLRYPHISICW-EQSDTWALDNVLQELGRERTIAMS 234 D + +DHPA+ ++W + +L HI+ +D L LG R I + Sbjct: 177 DEIVCLVAEDHPAVKSPRSWTAERYLASEHIAPTPLHPGARGVIDEHLDALGLARDIVVR 236 Query: 235 LPEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLW 294 P F M A +L +Y QL L +V P+PF + LW Sbjct: 237 SPYFGLGPQMVAHSRLVLTTGRLFCSRYVGQLPGLRIVRCPVPFPALV-------YYQLW 289 Query: 295 HKRNSHNPKIVWLRETIKNLYASM 318 H+ + + WLR ++++ + Sbjct: 290 HELSHQSAAGRWLRGVMRDVARGL 313 >UniRef50_D1BNW2 Transcriptional regulator, LysR family n=4 Tax=Veillonellaceae RepID=D1BNW2_VEIPT Length = 307 Score = 216 bits (551), Expect = 9e-55, Method: Composition-based stats. Identities = 46/307 (14%), Positives = 101/307 (32%), Gaps = 25/307 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +D + L + ++S +KAA+ ++++ SA+S+++ L LF+ + + T Sbjct: 1 MDFHHLKYFVEVADQKSFSKAARNLHISQSAISRTIKALEDELGVVLFMRNAKSVELTDG 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPH-HQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + M L + + L + + YPQ Sbjct: 61 GTIFLTHAKRVVFMFEHLKTDFENEFRLEQGSIRIGIPPITDAPIFAQLLGEFKKVYPQI 120 Query: 127 TIKLRNWDYDSLD-AITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 ++L ++ ++ G +DIG + + P + L SD V + Sbjct: 121 ELELYEQGSKKVEISVQEGLIDIGIICTKPN----------PKEFESFYLTSDPLSVIIP 170 Query: 186 KDHPALHQ-TWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 K P + L+ + + + + + G + I + + L Sbjct: 171 KSSPLAKEKEIRLEMLADESFVLHKDDFNLHDEIIKACKHTGFQPHIVFETSQRDLMLQT 230 Query: 245 AAQPDNLLLATAPRYCQYYNQLH---QLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 + NL +A P + +V PL ++ ++W K + + Sbjct: 231 VSA--NLAIALLPSRLCPEVGENTEVGSKVVVRPL------VPEIIHTLYVIWKKGHYLS 282 Query: 302 PKIV-WL 307 WL Sbjct: 283 HASRLWL 289 >UniRef50_B9Z7Z3 Transcriptional regulator, LysR family n=3 Tax=Proteobacteria RepID=B9Z7Z3_9NEIS Length = 324 Score = 216 bits (551), Expect = 1e-54, Method: Composition-based stats. Identities = 76/315 (24%), Positives = 133/315 (42%), Gaps = 21/315 (6%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 ++T D NLL+ L +L+ E SV +AA+R+ ++PSA+S++LA+LR DPL V + GL P Sbjct: 1 MSTPDFNLLVTLDVLLAEGSVARAARRLRLSPSAMSRALARLRETTGDPLLVRAGRGLVP 60 Query: 65 TPLMVSMEQNLAEWMQMSNLLLDKPH--HQTPRGLKFELAAESPLMMIMLNALSKQIYQR 122 TP + + + +++ +Q + +L T F L + +L ++ + Sbjct: 61 TPRALELREQVSQLVQDAAAVLRPAEKLDLTQLVRTFTLRVGDGFVENFGPSLIARVGEA 120 Query: 123 YPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCV 182 P ++ + G VD+ + + + LF D Sbjct: 121 APGVRLRFMPKSNKDTAPLRDGSVDL---------DTGVVGEGTGPEVRVRALFQDRFIG 171 Query: 183 WLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 +R+ HP + H+ + +D +D L+ +G ER I + F +L Sbjct: 172 VVRQGHPLCQGEITPARYAAGRHVLVSRRGTDKGPVDETLRAIGLEREIMTIVGGFAPAL 231 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 +A D L+AT P + ALP P E+ +LLWH R + Sbjct: 232 ALARATD--LVATVPER-HTGTLRDGMHSFALPFPAP-------EITVSLLWHPRMDADL 281 Query: 303 KIVWLRETIKNLYAS 317 WLR ++ + A+ Sbjct: 282 AHRWLRGCVREICAA 296 >UniRef50_C4I668 Transcriptional regulator, LysR family n=80 Tax=Proteobacteria RepID=C4I668_BURPS Length = 297 Score = 216 bits (551), Expect = 1e-54, Method: Composition-based stats. Identities = 68/305 (22%), Positives = 115/305 (37%), Gaps = 25/305 (8%) Query: 15 CLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSMEQN 74 L L+ E +VT+AA R+N++ +VS LAKLR F DPL + P G+ PT + + Sbjct: 14 TLDALLSEHNVTRAAARLNLSQPSVSIHLAKLRDIFGDPLLLPGPRGMRPTARADELREP 73 Query: 75 LAEWMQMSNLLLD--KPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQATIKLRN 132 L ++ + P + +AA ++ + P + + Sbjct: 74 LRRALETLGRAVSPGAPFDPAASAHTWRVAASDYSESTVVLPALNGLRAAAPGTRLAVVE 133 Query: 133 -WDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPAL 191 +G++D+ F + P + + LF++ + R HP L Sbjct: 134 TVPSRIAKQAEQGDIDLAF----------HITECAPGNLRHRALFTERYVLVGRAGHPRL 183 Query: 192 HQTWNLDTFLRYPHISICW-EQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQPDN 250 + L F + H+ + D L +LG R + +S+P F + A D Sbjct: 184 KRRPTLAQFCKLDHVIVSPDGGGFQGGTDQALAKLGLARRVVLSVPHFLFMMSAVANSD- 242 Query: 251 LLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWLRET 310 L+A P L +V P+ +LWH+R+ +P WLRE Sbjct: 243 -LVAMMPSRLVR--DSRALQVVEPPVDVP-------GFRMAMLWHERSHRDPAHQWLREH 292 Query: 311 IKNLY 315 I Sbjct: 293 IAASV 297 >UniRef50_C2LG43 LysR-family transcriptional regulator n=4 Tax=Enterobacteriaceae RepID=C2LG43_PROMI Length = 323 Score = 216 bits (551), Expect = 1e-54, Method: Composition-based stats. Identities = 157/316 (49%), Positives = 224/316 (70%) Query: 2 KKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLG 61 K + +DLNLL+ Q+L+QERSVT AAK ++++PSAVSK+LAKLR WFDDPLF+ SP G Sbjct: 3 NKPLHRIDLNLLVIFQILLQERSVTLAAKWLSISPSAVSKALAKLRIWFDDPLFIRSPQG 62 Query: 62 LSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQ 121 L PTPL +S+E +L++++ +S+ + +K + + P GLKF L E+PL +ML +L +QI Sbjct: 63 LIPTPLSLSIEDSLSDFINISHHIANKRNTEVPVGLKFNLVLETPLHQVMLPSLPQQILS 122 Query: 122 RYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPC 181 YP++T++++NW+Y+SL I GEVDIG GRE + RS+ELL LP IDYE+LF D+P Sbjct: 123 HYPKSTLQIKNWEYNSLSNIIDGEVDIGLVGREYYSRSKELLELLPDVIDYEILFDDIPL 182 Query: 182 VWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQS 241 V+L K+HP + W+L+ FL + +S +++ WALDN+L+E+ + R IA++ FEQS Sbjct: 183 VYLHKNHPLMKMKWDLNNFLSFSQVSTEYDKQSHWALDNILKEMNKSRQIAITYTSFEQS 242 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 LFM +QPD+ L+ AP YC+YY + H +V LP+P +L +PF LLWHKRNSHN Sbjct: 243 LFMISQPDHQLITCAPGYCRYYVKTHFPDIVTLPIPLPPVFLDQLHLPFVLLWHKRNSHN 302 Query: 302 PKIVWLRETIKNLYAS 317 KI+WLR TI+ Sbjct: 303 TKIIWLRNTIRKSINQ 318 >UniRef50_D1WWA8 Transcriptional regulator, LysR family n=7 Tax=Streptomyces RepID=D1WWA8_9ACTO Length = 310 Score = 216 bits (551), Expect = 1e-54, Method: Composition-based stats. Identities = 40/297 (13%), Positives = 88/297 (29%), Gaps = 26/297 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L + +E +AA+R+ + +S+ + +L LF + + T Sbjct: 1 MELRHLRAFLAVAEELHFGRAARRLQMAQPPLSQRIRQLEKELGVQLFHRNTRSVRLTGA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + + + + + + L L++ + +P Sbjct: 61 GETFLDPVRTVLDDLDTAVRAARSAGRGEYGRVTIGFAGASSHETLPRLTRAVRAAHPGL 120 Query: 127 TIKLRNWDYD--SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 + + Y +L + G +D+GF +++ V+ + L Sbjct: 121 ELVMTGQTYANVALSRVADGSLDLGFVRLPVSRP----------GVEHRVIDEEELLCAL 170 Query: 185 RKDHPALH-QTWNLDTFLRYPHISICW--EQSDTWALDNVLQELGRERTIAMSLPEFEQS 241 DHP + +L P +S + AL + G + P+ Sbjct: 171 PSDHPLARHEAVSLADLADEPFVSFPANTGSTVRDALTEACESAGFTPRVVQEAPDSYTI 230 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRN 298 + + A + L + Q L L + L W N Sbjct: 231 MALVAAGVGVTLTVTS---VRHIQQSGLVYRPL-------TGPPIRRQAALAWRADN 277 >UniRef50_C6BS61 Transcriptional regulator, LysR family n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6BS61_DESAD Length = 310 Score = 216 bits (551), Expect = 1e-54, Method: Composition-based stats. Identities = 82/322 (25%), Positives = 139/322 (43%), Gaps = 22/322 (6%) Query: 1 MKK-SITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSP 59 M K + + LDLNLL+ L + ERS+T A ++ +T SAVS +L+KLR FDD LFV Sbjct: 1 MSKTNSSNLDLNLLVILDTIFTERSLTLAGNKLFMTQSAVSHALSKLRHHFDDRLFVRRG 60 Query: 60 LGLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSK 117 + PTPL ++ QN+A ++ N L P F L L ++L + + Sbjct: 61 NIMEPTPLCKTIHQNIAPSLKAINQSLADRGEFDPASSKRTFSLGLSDYLCKLLLPEILR 120 Query: 118 QIYQRYPQATIKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLF 176 I R +I++ Y+ + + G++D+ + + E LF Sbjct: 121 LIDSRALGISIRIMQTTYEKREEMLQSGKLDVFLG----------CPRNYGAGVLKEKLF 170 Query: 177 SDVPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLP 236 D +R DHP + N + ++ +S L++ L G +R I + L Sbjct: 171 EDREVCVVRNDHPIKGEVMNEEEMAENEFAALSLSESGLGFLEDYLYRKGVQRKIKIVLQ 230 Query: 237 EFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHK 296 + + + + + A R + Y +L +V +PL E + WH Sbjct: 231 QETVIPSLVENSNLVG-SIAQRLAEMYAAKGRLRIVHMPLE-------NTEFEVSQHWHS 282 Query: 297 RNSHNPKIVWLRETIKNLYASM 318 N ++P W+R IK + A++ Sbjct: 283 LNDNDPAQQWIRSVIKEVAATL 304 >UniRef50_C0F0J2 Putative uncharacterized protein n=1 Tax=Eubacterium hallii DSM 3353 RepID=C0F0J2_9FIRM Length = 297 Score = 216 bits (551), Expect = 1e-54, Method: Composition-based stats. Identities = 43/308 (13%), Positives = 98/308 (31%), Gaps = 20/308 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 + + + +E ++TKAAK++ +T VS ++ ++ + F L T Sbjct: 1 MSIRHFRIFIAVAEEENITKAAKKLYLTQPTVSVAIKEIEEHYGARFFERINQRLHITEE 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQAT 127 ++ M + + + + + A + + L ++ RYP Sbjct: 61 GKRFLDYAKHFIAMYDEMEIAFKNTD-FTGRLRVGASVNIGTYYIPRLIREFRDRYPGIN 119 Query: 128 IKLRNWDYDSLD-AITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRK 186 ++++ ++ + G++D+ G I E LF + Sbjct: 120 VQVKINTTAVVEKELLDGKLDLALVGGTIQSE----------HIVAEPLFYEKYTAICAP 169 Query: 187 DHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAA 246 +HP +T L+ F++ P +S + + + G T + Sbjct: 170 EHPMAGKTVPLEEFMKEPLLSREKSSGAYEVFQSAVNQTGLTVTPVWESTSQTTLMEAV- 228 Query: 247 QPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVW 306 L + P Q+ + + L + + +H +P I Sbjct: 229 -HYGLGVTIVPE------QMIKREVREGRLSQITFSDFSFQNTIHIAYHHSKYLSPSIKK 281 Query: 307 LRETIKNL 314 +K L Sbjct: 282 FILLVKTL 289 >UniRef50_A3K7Z5 Regulatory protein, LysR:LysR, substrate-binding n=1 Tax=Sagittula stellata E-37 RepID=A3K7Z5_9RHOB Length = 333 Score = 215 bits (550), Expect = 1e-54, Method: Composition-based stats. Identities = 46/301 (15%), Positives = 99/301 (32%), Gaps = 25/301 (8%) Query: 4 SITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLS 63 ++ ++L L + +E + T+AA+++ + +S+ + L L S +S Sbjct: 25 NLPRIELRQLRYFLAVAEELNFTRAAEKMGIAQPPLSQQILVLEQQLRVKLLNRSRRHVS 84 Query: 64 PTPLMVSMEQNLAEWMQMSNLLLDKPHHQ-TPRGLKFELAAESPLMMIMLNALSKQIYQR 122 TP + + + + + +AA + ++ L + + Sbjct: 85 LTPEGEAFILYARRIINNTQIAAELVGAIKRGEEGPLSVAAIFSSIYTVVPQLFEAFVAQ 144 Query: 123 YPQATIKLRNWD-YDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPC 181 +P+ L+ L A+ +D+G + I+ L + Sbjct: 145 HPRVRFHLQEMTIGQQLVALREERIDLGILRGPI----------IHPEIETHTLLEEPFV 194 Query: 182 VWLRKDHPALHQTW-NLDTFLRYPHI--SICWEQSDTWALDNVLQELGRERTIAMSLPEF 238 V + K HP QT D L P I + + + +VL I + + Sbjct: 195 VVVSKKHPLAKQTILTADQVLSQPLIRVIPSVNRDYSHQMFSVLANRNTTPNIVHEVSDT 254 Query: 239 EQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRN 298 L + A + ++ P + + QL + L ++ L W K + Sbjct: 255 HTLLGLVAA--GMGISMVPASVRSIH-TDQLRYIPL-------REGTPTSTIQLAWLKDS 304 Query: 299 S 299 Sbjct: 305 D 305 >UniRef50_C6XZC9 LysR substrate-binding n=1 Tax=Pedobacter heparinus DSM 2366 RepID=C6XZC9_PEDHD Length = 300 Score = 215 bits (550), Expect = 1e-54, Method: Composition-based stats. Identities = 54/313 (17%), Positives = 115/313 (36%), Gaps = 26/313 (8%) Query: 6 TTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPT 65 ++L L+ ++L +E KAA+++ ++ SA+S+ + +L LF S ++ + Sbjct: 6 NQIELRHLVYFKMLAEELHYRKAAEKLFISQSALSQQIKQLEQLIQISLFDRSNKKVALS 65 Query: 66 PLMVSMEQNLAEWMQMSNLLLDKPHHQT-PRGLKFELAAESPLMMIMLNALSKQIYQRYP 124 S+ ++ + + L + + + M +L L K ++ P Sbjct: 66 ESGKSLYKDAVQVLNKVESALTNLELIKIGNTGQLRIGFVASAMQSVLPGLLKNFHKECP 125 Query: 125 QATIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVW 183 +L + + L A+ E+D+GF + + D ++ + + Sbjct: 126 NIKFQLDELNNREQLMALKNEELDLGFMRS----------NHVDAGYDIRSVYKETFSLV 175 Query: 184 LRKDHPALHQT-WNLDTFLRYPHISICWEQS--DTWALDNVLQELGRERTIAMSLPEFEQ 240 L ++HP +T N+ F P I +QS + N+ + G IA Sbjct: 176 LPQNHPINAETFINIGQFREEPFILFPNDQSQLYYQQIINLCADQGFAPKIAHRSIHAPT 235 Query: 241 SLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 + + ++ P + + F E ++ +W K+ S Sbjct: 236 IFKLVE--YGMGVSVIPTSLAHTENKE--------IKFIELKKITQRTELYAVW-KKKSQ 284 Query: 301 NPKIVWLRETIKN 313 NP + L E + N Sbjct: 285 NPALPHLLEMLIN 297 >UniRef50_A3VLP1 LysR family transcriptional regulatory protein n=1 Tax=Rhodobacterales bacterium HTCC2654 RepID=A3VLP1_9RHOB Length = 325 Score = 215 bits (550), Expect = 1e-54, Method: Composition-based stats. Identities = 36/299 (12%), Positives = 97/299 (32%), Gaps = 27/299 (9%) Query: 4 SITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLS 63 + ++L L + +E + T+AA+R+ + +S+ + L LF+ S + Sbjct: 6 DLPKVELRQLRYFLAVAEELNFTRAAERMGIAQPPLSQQIISLEHQLGAKLFIRSCRRVK 65 Query: 64 PTPLMVSMEQNLAEWMQMSNLLLDKPHHQT-PRGLKFELAAESPLMMIMLNALSKQIYQR 122 T + ++ + + L + + + L + + ++ + Sbjct: 66 LTAEGIELQAYARRIINTTMLATESIRSIANGKNGQIALGSVCSAIHSLVPHILPPFAAL 125 Query: 123 YPQATIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPC 181 +P + L+ + A+ +DI + LF++ Sbjct: 126 HPGVRVHLQEMTVKEQFRALNEERIDIAIVREPMATT----------EFATQPLFTEPFV 175 Query: 182 VWLRKDHPALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQE---LGRERTIAMSLPE 237 + ++ P +L+ R P + + + ++ D++ G E + + Sbjct: 176 AAVNRNSPLARMNRLSLEQIAREPLVQV-YRSANREYSDHMFSALMEQGYELNVVCEASD 234 Query: 238 FEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHK 296 L + A + ++ P + ++ +PL +L W+ Sbjct: 235 MHSLLGLVAS--GIGVSLVPASLVNIQTAN---VIYVPL-----SDDVQSSTLSLAWNP 283 >UniRef50_C7PVI0 Transcriptional regulator, LysR family n=11 Tax=Actinomycetales RepID=C7PVI0_CATAD Length = 297 Score = 215 bits (550), Expect = 1e-54, Method: Composition-based stats. Identities = 47/310 (15%), Positives = 93/310 (30%), Gaps = 22/310 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 + + L + + R T+AA+ ++VT ++S+ + L LF+ + ++ T Sbjct: 1 MQFHQLRYFIAVAETRHFTRAAEALHVTQPSLSQQIRALEHELGADLFLRARGNITLTDA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTP-RGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 ++ + ++ + R L A L +L + + ++RYP Sbjct: 61 GEALLPMARRILADADAARREVQELAELRRGHVRLGATPSLCTGLLPDVLRTYHRRYPGI 120 Query: 127 TIKLRN-WDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + ++ +D + + RG +D+ L S A+ E L + V Sbjct: 121 QLLVQESGSHDLVRDLARGALDLALVVLP--------LPSPSPALTTEELLREDLVVVSA 172 Query: 186 KDHPAL--HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 + P + + I + G E A+ E + L Sbjct: 173 PNLPPPGDGRQVRIADLEHEQLIMFRHGYDLRDLTVAACRAQGFEPVFAIEGGEMDAVLG 232 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 A L +A P V L L L + Sbjct: 233 FARA--GLGVAIVPSMVAQN--------VDPSLRVTPIAPPALHRTIALAHRTDVALPRA 282 Query: 304 IVWLRETIKN 313 R T+ Sbjct: 283 AQEFRRTLLE 292 >UniRef50_B9KYF2 RuBisCO operon transcriptional regulator n=1 Tax=Thermomicrobium roseum DSM 5159 RepID=B9KYF2_THERP Length = 299 Score = 215 bits (550), Expect = 1e-54, Method: Composition-based stats. Identities = 48/310 (15%), Positives = 99/310 (31%), Gaps = 21/310 (6%) Query: 7 TLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTP 66 + L L + + + RS ++AA+ + ++ AVS + L PLF + G+ T Sbjct: 2 DVSLRQLQVFRSVARHRSFSRAAEDLVISQPAVSAQIKSLEQVLGVPLFQRTGRGVELTE 61 Query: 67 LMVSMEQNLAEWMQMSNLLLDKPHHQT-PRGLKFELAAESPLMMIMLNALSKQIYQRYPQ 125 + + + + L H + + +AA + + ++ ++ YP Sbjct: 62 AGRQLLPYAERLLNLLDEALAAVHELRCAQRGQVRVAASTTAGIYVVPKALGAFHRAYPG 121 Query: 126 ATIKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 + L + ++ + G+ D+ G P ++ E + V Sbjct: 122 VELSLDVLNRFAVHQRLLAGDADVAIMGLIED----------PQDLEIEQFLPNELVVIA 171 Query: 185 RKDHPALHQ-TWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 H + LD R P + ++ + E G +AM L Sbjct: 172 SPRHHLARRHQIPLDEIAREPFLVREIGSGTRADMERIFAEAGLSPRVAMELRSNGAIKQ 231 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 A L +A PR L+ L + Q + ++L+ + Sbjct: 232 AVAAD--LGVAVMPRDAIGLELETG-RLIVLDV-----QGFPVRRWWSLVRRAGRQPSAA 283 Query: 304 IVWLRETIKN 313 L + Sbjct: 284 ADALWNFLLQ 293 >UniRef50_Q5WCI6 LysR family transcriptional activator of glutamate synthase n=6 Tax=Bacillales RepID=Q5WCI6_BACSK Length = 301 Score = 215 bits (550), Expect = 1e-54, Method: Composition-based stats. Identities = 49/314 (15%), Positives = 103/314 (32%), Gaps = 21/314 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +++ LL + + VT+AA ++V SAVS+ + L + LF+ + TP+ Sbjct: 1 MEIRQLLYFMEVAKREHVTEAAAALHVAQSAVSRQIFNLESELGVDLFIREGRRVKLTPI 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHH-QTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + M + + + P+ +A L L ++YP+A Sbjct: 61 GKIFLERIKHAMNVIDDAKREVQEYLDPKKGTIRVAFPISLAAYTLPTAIYAFRKQYPEA 120 Query: 127 TIKL-RNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 +L + + +D + +G+ ++ G + I +LF++ L Sbjct: 121 KFQLKQGLYRELIDGVIKGDYNMALIGP---------VPMEEKKITPRILFAERIVALLP 171 Query: 186 KDHPALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 HP NL P + + + N E+G IA + + + Sbjct: 172 IHHPLAKSAEINLLDLKNDPFVLLPEGFVFRDLVINACSEIGFVPQIAFEGDDIDALKGL 231 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 + L + P V +PL + ++ P Sbjct: 232 VSA--GLGVTLMPEV--TLVDNTPRSTVKIPLSEP-----NVTRTVGVITPTERGLLPTE 282 Query: 305 VWLRETIKNLYASM 318 E ++ + + Sbjct: 283 ELFYEFLQEFFTKL 296 >UniRef50_A7ZAT2 Putative HTH-type transcriptional regulator n=2 Tax=Bacteria RepID=A7ZAT2_BACA2 Length = 302 Score = 215 bits (550), Expect = 1e-54, Method: Composition-based stats. Identities = 38/307 (12%), Positives = 98/307 (31%), Gaps = 22/307 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +D+ + + + S TKA++ ++++ A+SK + L L S ++ T Sbjct: 1 MDIRQITYFLEVAKSNSFTKASENLHLSQPALSKMVKSLEEELKVELIDRSARQIALTDA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + M+ + L + K ++ + ++ + + Q YP Sbjct: 61 GEIVFEQGQMIMKSIDDLSTNLYDLLHLKKGKVKIGIPPLIGVLFFPKIIRGFKQLYPDV 120 Query: 127 TIKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 IKL + + + G +D+G +++ L ++ +++ Sbjct: 121 NIKLIEHGGNKVKQEVEDGVLDLGVVIEPVDEEQFDIIP----------LLNEELMLFVH 170 Query: 186 KDHPALHQTW-NLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 HP +H+ + P I + S + G I +++ M Sbjct: 171 SAHPLVHKEIVEMQDLKNEPFILFSEDFSLHDRIIQECIRAGFRPNIVYESSQWDFISEM 230 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 + L ++ P+ + ++ + ++ K + + Sbjct: 231 I--GEELGISIFPQSIVKKTDQSLVKAIS-------IVNPSIPWKVAIILKKGKYVSHAV 281 Query: 305 VWLRETI 311 I Sbjct: 282 REFIRYI 288 >UniRef50_A8H854 Transcriptional regulator, LysR family n=1 Tax=Shewanella pealeana ATCC 700345 RepID=A8H854_SHEPA Length = 303 Score = 215 bits (549), Expect = 1e-54, Method: Composition-based stats. Identities = 71/317 (22%), Positives = 131/317 (41%), Gaps = 21/317 (6%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 ++ LDLNLL ++L++ ++ KAA+ ++++ AVS++L +LR +F D LFV S GL P Sbjct: 1 MSQLDLNLLKVFRVLIEVKNTRKAAEILHLSQPAVSRALRRLRDYFGDELFVRSAHGLEP 60 Query: 65 TPLMVSMEQNLAEWMQMSNLLLDKPHHQTPR--GLKFELAAESPLMMIMLNALSKQIYQR 122 T + + L E M L+ P+ K +A + ++ L K + ++ Sbjct: 61 TSKALVIGSRLPEAMDQLFEALNVKEEFEPQFYSGKVTIAVNGFIAHWLVPPLIKALTEK 120 Query: 123 YPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCV 182 P I + NW+ + D I GE+ + + + + E L SD V Sbjct: 121 APNMEIYMANWEESTSDKIINGEIQLAINYFPLELTKQ---------LIQEKLGSDDFVV 171 Query: 183 WLRKDHPALHQTWNLDTFLRYPHI--SICWEQSDTWALDNVLQELGRERTIAMSLPEFEQ 240 RKDHP + + F +YP + L++LG + + +S + Sbjct: 172 LCRKDHPFQKEVIGAEDFPKYPLASHIVPGWNETKNFTVEALKKLGYKPRVQLSSSKMNI 231 Query: 241 SLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 L D LL + ++ + ++ F L++ ++ Sbjct: 232 ILSSLELTDMLLPC---SKLLAKTLSDRFRIIDIDPELEQPSS-----DFALIYANKSRR 283 Query: 301 NPKIVWLRETIKNLYAS 317 NP WL++ + + S Sbjct: 284 NPLDEWLQQCVIDCVNS 300 >UniRef50_Q7MCZ8 Transcriptional regulator n=13 Tax=Vibrionaceae RepID=Q7MCZ8_VIBVY Length = 313 Score = 215 bits (549), Expect = 1e-54, Method: Composition-based stats. Identities = 69/297 (23%), Positives = 131/297 (44%), Gaps = 20/297 (6%) Query: 21 QERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSMEQNLAEWMQ 80 +E V++AA R+++T SA+S+ LA+LR DPL V L TP ++ L + + Sbjct: 18 EECHVSRAADRLHITQSAMSRQLAQLRELCSDPLLVREGNRLVATPHAEALRPKLVQLLS 77 Query: 81 MSNLLLD-KPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQATIKLRNWDYDSLD 139 L D + + + L++ + ++ LS+ + ++ P+ T+ R W LD Sbjct: 78 EFEHLFDHQAFNPQDWQGQLVLSSSDYVAQFIVPTLSRVLIEQAPRLTLSYRLWQPQYLD 137 Query: 140 AITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPALHQ-TWNLD 198 ++ + + +L S P + Y + D +R+ HP + +L+ Sbjct: 138 SLLDTGIHLA----------STMLPSPPKELSYTKIGEDYSVCVMRQGHPLSGKAALSLE 187 Query: 199 TFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQPDNLLLATAPR 258 LRY HI + A D+VL++LG+ R IA+ +P F ++ + Q D +++ Sbjct: 188 DMLRYSHIKVTGGGDKDSATDSVLRKLGKTRHIALQVPFFSAAVNVLIQSDYMMV-VPEH 246 Query: 259 YCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWLRETIKNLY 315 + + LP + Q + L+WH + H+ W+RE + + Sbjct: 247 IAVNLAKSQPICHYPLPFDTEIHQ-------YWLMWHPKYDHDSAHRWVREKVTRVM 296 >UniRef50_B6RAE8 Transcriptional Regulator, LysR family n=1 Tax=Pseudovibrio sp. JE062 RepID=B6RAE8_9RHOB Length = 307 Score = 215 bits (549), Expect = 1e-54, Method: Composition-based stats. Identities = 70/319 (21%), Positives = 130/319 (40%), Gaps = 16/319 (5%) Query: 1 MKK-SITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSP 59 M++ ++ +DLNLL+ L+ L++ R V+ AA +++++ AVS++L +LR +DPL V Sbjct: 1 MRQVNLRGVDLNLLVILEKLLETRHVSLAATQLHMSQPAVSRALQRLRDLLNDPLLVRIA 60 Query: 60 LGLSPTPLMVSMEQNLAEWMQMSNLLLD-KPHHQTPRGLKFELAAESPLMMIMLNALSKQ 118 T +++ L + ++ + + + L K+ Sbjct: 61 GDYELTERAAEIQRLLPSVLATIQDVIAKPEFDPATAQETIRFSGPELEVNLYGPPLLKR 120 Query: 119 IYQRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSD 178 + Q P ++L++ + + + GE SG+E + + + L Sbjct: 121 MKQEAPGMKLELKSNIRNQFEPLENGEAHFVLSGQEPSAATSQ--------LHRISLGRF 172 Query: 179 VPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEF 238 + KDHP + +L+ +L HIS+ S +D L +GR+R +A+ + F Sbjct: 173 SYVCLMSKDHPLAGKPISLNDYLAQDHISVMITGSGQSIIDEKLAAMGRKRNVAVKIGSF 232 Query: 239 EQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRN 298 ++ Q D L P +A P+P K F L WH+ Sbjct: 233 FAAMHFCGQTDLLF--LVPSIFDK-KIYEGHNTIASPVP---DFLKDHHQEFFLYWHECY 286 Query: 299 SHNPKIVWLRETIKNLYAS 317 H+P I W R +K Sbjct: 287 HHDPMIQWTRTLMKETTRQ 305 >UniRef50_Q0BYJ0 Transcriptional regulator, LysR family n=1 Tax=Hyphomonas neptunium ATCC 15444 RepID=Q0BYJ0_HYPNA Length = 297 Score = 215 bits (549), Expect = 2e-54, Method: Composition-based stats. Identities = 68/315 (21%), Positives = 135/315 (42%), Gaps = 25/315 (7%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 ++ +LDLNLL L+ + ERS+T+A++ +++T AVS +L++LR F+DPLFV G+ Sbjct: 1 MNLRSLDLNLLPVLEAIYAERSLTRASEVLHITQPAVSNALSRLRLHFEDPLFVREGRGV 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDK--PHHQTPRGLKFELAAESPLMMIMLNALSKQIY 120 PT + ++ + E + L+ + F +++ I+ +++++ Sbjct: 61 KPTAMTEALMPAIRESLDKLRNGLEPRSVFEPSRSTRVFNISSRDASAHILAPPIARRLE 120 Query: 121 QRYPQATIKL-RNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 + P I + + G +D+ ++ ++ +L S Sbjct: 121 VQAPGVRISWSQPQRSAIASELASGRLDLAIDVQDLRGA----------DLERVLLSSTK 170 Query: 180 PCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFE 239 L DHP ++ LD F HI++ + ++ + + LG T LP ++ Sbjct: 171 YVCALASDHPLANEPLTLDKFFSMRHIAVSSRREGRSLIEEMARSLGHRITPVHRLPHYQ 230 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 +L + L A P + L ++ LP F L WH+ + Sbjct: 231 PALEVVRCTHLALAAPQP-----VTEGSGLAVMKLPFDFPSPGSM-------LYWHREYA 278 Query: 300 HNPKIVWLRETIKNL 314 +P ++WLR I+++ Sbjct: 279 QDPALMWLRGLIRDV 293 >UniRef50_Q3M2K4 Transcriptional regulator, LysR family n=5 Tax=Cyanobacteria RepID=Q3M2K4_ANAVT Length = 298 Score = 215 bits (549), Expect = 2e-54, Method: Composition-based stats. Identities = 35/317 (11%), Positives = 102/317 (32%), Gaps = 27/317 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVN-SPLGLSPTP 66 ++L L + +E +KAA+R+++ +S+ + +L A LF + + T Sbjct: 1 MELRHLRYFIAVAEELHFSKAAERLHIAQPPLSQQIQQLEAELGVELFQRKTKRQVQLTE 60 Query: 67 LMVSMEQNLAEWMQMSNLLLD-KPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQ 125 Q + + +D + + S + +L + +Q +++ + Sbjct: 61 AGQVFLQEAYQLFAQLSKAIDLTQRTGRGEKGQLRVGFTSLVTYDLLPVILRQFREQFLE 120 Query: 126 ATIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 + L+ A+ + +GF+ + + E + + V + Sbjct: 121 VELVLQELTTTQQEQALFDRRIHVGFAHPPLEDNT----------FNQECIHQEGLIVAM 170 Query: 185 RKDHPALHQT-WNLDTFLRYPHISICW--EQSDTWALDNVLQELGRERTIAMSLPEFEQS 241 H Q ++ I + ++ Q+ + + + + Sbjct: 171 LVTHFLARQENISVRELKDENFIMFPRYLGPGLYDQILSLCQQGNFSPKVTIEAIQMQTI 230 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 + + + +A P Q + + + +K V ++W + Sbjct: 231 IGLV--SGGMGIAIVPSSLQNLQRAG--------VVYRTLDEKTPLVETAVVWRQE-DMT 279 Query: 302 PKIVWLRETIKNLYASM 318 P + + ++++ + Sbjct: 280 PVLREFLQIVRSVCVEL 296 >UniRef50_C6BXQ9 Transcriptional regulator, LysR family n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6BXQ9_DESAD Length = 301 Score = 215 bits (549), Expect = 2e-54, Method: Composition-based stats. Identities = 43/311 (13%), Positives = 94/311 (30%), Gaps = 25/311 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++ L + +E +AAKR+ ++ +S+ + K LF + ++ T Sbjct: 1 METRQLKYFLAVAEELHFGRAAKRLFISQPPLSQQIKKFEDELGVKLFQRNKRSVALTAA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNALSKQIYQRYPQA 126 VS+ ++ M+ +F L P + L + + +YP Sbjct: 61 GVSLLRDAPGIMRAIGRAKSNLLDAATGEGGQFTLGYIGPALETTLTEIIRDFKGQYPSV 120 Query: 127 TIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + LR D L AI G++D G H S ++ E+ + + + Sbjct: 121 RLDLREMFTTDQLKAIRSGDIDAGIVRLFRHDVS---------DLERELFHRESYALVVP 171 Query: 186 KDHPAL-HQTWNLDTFLRYPHISICWEQSDT--WALDNVLQELGRERTIAMSLPEFEQSL 242 HP ++ I E V E G + ++ Sbjct: 172 DGHPLADRAAVDVSELAGEQFIFFPREGQPRLYDEWMRVFSEAGFVPDVVQEATRKSATV 231 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 + A + + + + F + +L++ + + P Sbjct: 232 ALVAANMGIGI-VPESMA---------RIKPQGVVFKRLSGDFPVIEMSLIY-RSTNGFP 280 Query: 303 KIVWLRETIKN 313 + ++ Sbjct: 281 AVDNFIAAVRQ 291 >UniRef50_B7RYN1 Transcriptional regulator, LysR family protein n=1 Tax=marine gamma proteobacterium HTCC2148 RepID=B7RYN1_9GAMM Length = 303 Score = 215 bits (549), Expect = 2e-54, Method: Composition-based stats. Identities = 66/319 (20%), Positives = 132/319 (41%), Gaps = 23/319 (7%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 ++ ++DLNLL ++ E SVT+AA++I ++ A+S +L + R D LF + GL Sbjct: 1 MNLRSVDLNLLTVFDAVITEGSVTRAAEKIGMSQPAMSIALTRFRHIAKDELFERTGRGL 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQT--PRGLKFELAAESPLMMIMLNALSKQIY 120 PTP + + + + + L+ F + ++ML L +++ Sbjct: 61 RPTPRALELAAPIRRALDIVTDALEHGTDFDMSRSDRSFSVVLSGIGEIVMLPTLMRRLE 120 Query: 121 QRYPQATIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 + I R+ + D L + G VD+ ++ I + + Sbjct: 121 STGSRININTRHVAHGDMLKEMHFGNVDL----------YMWIVPIESSEIICTQIGNTS 170 Query: 180 PCVWLRKDHPALHQTWNLDTFLRYPHISIC-WEQSDTWALDNVLQELGRERTIAMSLPEF 238 +R DHP + + +++ F H++ +D L LG +R +MS+ + Sbjct: 171 EVCLVRADHPYVGDSLSVNEFAALRHVTFHMPGTYGPSIIDRELWRLGLKREHSMSVHSY 230 Query: 239 EQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRN 298 + + +Q D + +++ ++H L +V PL + P +LW K Sbjct: 231 FDAPRVLSQTDMV-CTMPRVLGRHFARVHGLKMVRSPLQLE--------FPVFMLWPKAA 281 Query: 299 SHNPKIVWLRETIKNLYAS 317 + WLRET+ +++ Sbjct: 282 EKDKGHQWLRETLIDIFKQ 300 >UniRef50_B2I0F8 Transcriptional regulator n=13 Tax=Acinetobacter RepID=B2I0F8_ACIBC Length = 293 Score = 215 bits (549), Expect = 2e-54, Method: Composition-based stats. Identities = 32/309 (10%), Positives = 94/309 (30%), Gaps = 22/309 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 + L L L + + A+ ++++ SA+S ++ L LF + + T Sbjct: 1 MTLKQLKAFLALARTLNYANASLELHLSQSALSLTIKSLEEELGGKLFNRNTRRVELTQE 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKP-HHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 S+ + + + + + +A+ + +L + Q +P Sbjct: 61 GKSLIPYAKKLLANWDEMENDVKQRFKLNRGTLSIASMPFVTHAILPEVIHQFLAVHPNL 120 Query: 127 TIKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + + + ++ + G ++G ++++ LF + L Sbjct: 121 NFSIHDIPNETIIEKVQDGIFELGICFEPDLTE----------GLEFKPLFEEDFLALLP 170 Query: 186 KDHPALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 K HP + P +++ + ++ + + + Sbjct: 171 KSHPLAQSSSITWHELCSNPFVTLQKPSIVRYLVEQNCLRNNITLDLKVECHQISSLSSF 230 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 A + ++ PR+ + L+ L + + + +++ K + Sbjct: 231 VA--YGIGVSAIPRHFAKHIDKEHNVLIDL-------KDEAIHKTVGIVYKKNFEISNIS 281 Query: 305 VWLRETIKN 313 E + Sbjct: 282 AQFIEALVQ 290 >UniRef50_Q2J7C4 Transcriptional regulator, LysR family n=22 Tax=Actinomycetales RepID=Q2J7C4_FRASC Length = 316 Score = 215 bits (548), Expect = 2e-54, Method: Composition-based stats. Identities = 54/318 (16%), Positives = 99/318 (31%), Gaps = 28/318 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 + L+ L + + R T+AA+R++V ++S+ + L PLF + +S TP Sbjct: 1 MQLHQLAYFVAVAETRHFTRAAQRVHVAQPSLSQQIRALEQELGTPLFNRARGNISLTPA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHH-QTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 ++ + + + R L A L L + + +QRYP Sbjct: 61 GETLLPLARRILTDTETARQRVTELLDLRHGTVRLGATPSLCTGFLPDVLRLFHQRYPGI 120 Query: 127 TIKLRN-WDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + + D + + G +D+ L S A+ L + + Sbjct: 121 RLLVEEGGSRDLVRDLAAGSLDLALIILP--------LQSSDPALATSPLIRESLVLVSS 172 Query: 186 KDHPA--LHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 D P + + +P + A +E G E A+ E + L Sbjct: 173 LDEPPIVAGRPLTVADLRNHPMVMFRRGYDLREATVTACREAGFEPIFAIEGGEMDAVLG 232 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 A L A P + +L + P Q L + Sbjct: 233 FVAA--GLGSAVIPSTVAH-----RLGMRVTPFVLPGLQ-----RTIGLARRRDVEPTRA 280 Query: 304 I----VWLRETIKNLYAS 317 L E +++ AS Sbjct: 281 AVELQRVLWEYLRDAAAS 298 >UniRef50_Q1YUD1 Probable transcriptional regulator n=1 Tax=gamma proteobacterium HTCC2207 RepID=Q1YUD1_9GAMM Length = 297 Score = 215 bits (548), Expect = 2e-54, Method: Composition-based stats. Identities = 48/286 (16%), Positives = 97/286 (33%), Gaps = 15/286 (5%) Query: 7 TLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTP 66 ++ +N ++ + + S +AA ++ ++ A+S ++ L L + ++ TP Sbjct: 2 SIPINQIVVFTTVARTGSFAEAAIQLYLSQPALSVAMKNLEQSLGGKLLARTTRSVTLTP 61 Query: 67 LMVSMEQNLAEWMQMSNLLLDKPH-HQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQ 125 + + + H K ++AA L + + + +YP Sbjct: 62 EGKAFYPVARRLLSEWEQSMQDVRNHFALGRGKLDIAAMPTYTTNFLPKILAEFHSQYPN 121 Query: 126 ATIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 I + + + + + ++G + + ++ L+ D L Sbjct: 122 IHITVHDVIAENVVQMVREERSELGITFAPEDAP----------DLHFQPLYQDRFVAIL 171 Query: 185 RKDHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 HP L QT L YPH+S+ +D LQE G T A + Sbjct: 172 PFKHPLLEKQTLKWIDLLAYPHLSLQRPAGTRKLIDQALQEKGLLLTPAFESHQLVSIGR 231 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVP 289 M + L L+ P + + L A+ P Q + P Sbjct: 232 MV--NEGLGLSVVPSTSRAQMEEMGLQCRAISAPVITHQVGIVTRP 275 >UniRef50_A9B3V4 Transcriptional regulator, LysR family n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9B3V4_HERA2 Length = 298 Score = 215 bits (548), Expect = 2e-54, Method: Composition-based stats. Identities = 41/313 (13%), Positives = 91/313 (29%), Gaps = 26/313 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L+ L + + + +VTKAA ++ ++SK+L L LF G+ + Sbjct: 1 MELSQLRYFEAVARLGNVTKAAHEQHIAQPSLSKALRALEQELGVHLFDRVGRGVELSDA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + + L + ++ +RY Sbjct: 61 GKLLLPYARRVLAELQAARHALQSRADLTVGHVSLGVTPTVGTRLIPQALAAFNRRYRGI 120 Query: 127 TIKLRNWD-YDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 ++L + ++ + G VD+ ++ L S+ V + Sbjct: 121 QLELHEAGASELVELLNAGVVDLAIVSALV------------HGVESTTLMSEPLVVAVG 168 Query: 186 KDHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 H Q+ + I + ++ G I + E + + + Sbjct: 169 LQHRFAQRQSIAANELRDEGFILFPQGYELRNYTLQLCEQAGFAPRIVLDGGEMDTVVSL 228 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 A L +A P+ Q L + L+ L+ H + +P Sbjct: 229 VAA--GLGVAVVPQLAID--QRMGLHAL-------MIDAGGLQRTLRLIRHSQRQPSPAA 277 Query: 305 VWLRETIKNLYAS 317 L + + Sbjct: 278 AALHRVLHEWVSQ 290 >UniRef50_Q12AP3 Transcriptional regulator, LysR family n=4 Tax=Burkholderiales RepID=Q12AP3_POLSJ Length = 303 Score = 215 bits (548), Expect = 2e-54, Method: Composition-based stats. Identities = 41/311 (13%), Positives = 99/311 (31%), Gaps = 24/311 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L L + + T+AA+R+++T S +S + +L + LF + T Sbjct: 1 MELRHLRYFVALAECLNFTRAAERVHITQSTLSHQIRQLEEEIGELLFERVGKRVLITER 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHH-QTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 A+ ++ + + K + + + + R+P Sbjct: 61 GELFLSYAAKALKEVDQGVAALKESARGLTGKLRIGSTHTFNQGFIPECIATLLVRHPTV 120 Query: 127 TIKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + + D + + + G +D+G S R + +E L+++ + + Sbjct: 121 KVAASEFTADDIGERLASGALDLGISYRPRTVG----------DLWFEPLYNEQMVLVVS 170 Query: 186 KDHPALHQ-TWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 HP + L R P + + + LD + E + + + L + Sbjct: 171 PQHPLAGRKRIRLVELHRQPLVLLPEAFATRAMLDECFRACDAEPLVVVEMNTLAPMLAL 230 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 + + + L A+PL + +LW + + Sbjct: 231 VERTQIGAI------VSENAVRDRSTLRAVPLESPTPMRTP-----GILWKRDVDKTAPM 279 Query: 305 VWLRETIKNLY 315 ++ + Sbjct: 280 RAFASIVRAIA 290 >UniRef50_C6D0W9 Transcriptional regulator, LysR family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D0W9_PAESJ Length = 296 Score = 215 bits (548), Expect = 2e-54, Method: Composition-based stats. Identities = 33/313 (10%), Positives = 89/313 (28%), Gaps = 22/313 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +++ L Q + E T+AA ++ +T +S + +L PLF ++ T Sbjct: 1 MEIRQLEYFQAICDELHFTRAADKLGITQPTMSYQIKQLEEELGVPLFHRIGKKIALTEA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTP-RGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + + + ++ + + +++ L + +YP Sbjct: 61 GFILLNHSRNIFRSIDGAREEISELHHMERGSLTIGTLIGEINDLVSGLLVDFHNKYPGI 120 Query: 127 TIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRK 186 +IKL D +D + + E+D + L+ + Sbjct: 121 SIKLLAL-EDVVDPLLQDELDFAVTIFPVD----------DDRFSKVSLYEEEFYFVAHS 169 Query: 187 DHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMA 245 + P + ++ ++ P I +D V G + + L + Sbjct: 170 NSPLSGEPSVTIEEAMKEPIIMFPKTHRCRQLIDTVCSMHGVAWEPVIETSAIKSILSLV 229 Query: 246 AQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIV 305 + + + ++ L + + K + Sbjct: 230 QS--GAGASILSKTLLELYPDQNMIMIP-------ISNPSLRREVGIAYLKDRYIGKATI 280 Query: 306 WLRETIKNLYASM 318 + + + + Sbjct: 281 AFMKQLTTRFDGV 293 >UniRef50_B5WR38 Transcriptional regulator, LysR family n=2 Tax=Betaproteobacteria RepID=B5WR38_9BURK Length = 309 Score = 215 bits (548), Expect = 2e-54, Method: Composition-based stats. Identities = 47/317 (14%), Positives = 102/317 (32%), Gaps = 27/317 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L ++ +E T+AA+R+ + +S + +L LF G+ T Sbjct: 1 MELRHLRYFVVVAEELHFTRAAERLGIGQPPLSLQIQRLERDIGATLFRRLSRGVELTEA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELA-AESPLMMIMLNALSKQIYQRYPQ 125 V + N + + + + + A + + ++ A+ ++ R+P Sbjct: 61 GVLLLDNARHILALVDRTCTDVQRLSRGEIGHMRVGFAGATYFLPLVPAIIREYRTRHPD 120 Query: 126 ATIK-LRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 + ++ +D + G VD F +D E+L + V L Sbjct: 121 VVLSPEQSNTPSLVDGLLEGRVDAAFIRPPIVSAD---------ELDVELLVKEDMVVVL 171 Query: 185 RKDHPALH--QTWNLDTFLRYPHISICW--EQSDTWALDNVLQELGRERTIAMSLPEFEQ 240 HP + L + A+ + Q G + P+ Sbjct: 172 PHSHPLARAGEPVPLSALAEETFLLFPRAIGAGLYDAITSACQRAGFLPRLGQEAPQIVS 231 Query: 241 SLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 + ++ PR +V LP+ + P +L W +R++ Sbjct: 232 IAPLV--GAGFGVSIVPRSTTQIQTDE---VVYLPIA-----GNAPKAPISLAW-RRHNP 280 Query: 301 NPKIVWLRETIKNLYAS 317 +P + R + + Sbjct: 281 SPVVRLFRAVAREMARE 297 >UniRef50_D1VD43 Transcriptional regulator, LysR family n=1 Tax=Frankia sp. EuI1c RepID=D1VD43_9ACTO Length = 361 Score = 214 bits (547), Expect = 2e-54, Method: Composition-based stats. Identities = 49/311 (15%), Positives = 91/311 (29%), Gaps = 24/311 (7%) Query: 10 LNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMV 69 L L + + + T+AA R++V ++S + L PLF + ++ T Sbjct: 21 LQQLAYFVAVAETKHFTRAAARVHVAQPSLSAQIRALETELGSPLFNRARGNITLTAAGE 80 Query: 70 SMEQNLAEWMQMSNLLLDKPHHQ-TPRGLKFELAAESPLMMIMLNALSKQIYQRYPQATI 128 ++ + + +++ + R + A L ML + + QRYP + Sbjct: 81 ALLPLARKILADADMARREVQELTDLRRGTVRVGATPSLCTGMLPEVLRLFRQRYPGIQL 140 Query: 129 KLRN-WDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKD 187 + D + + G +D+ L A+ L + V D Sbjct: 141 LVEEGGSRDLVGELAVGALDLALIILP--------LQGSDPALATAPLLREDLVVISSPD 192 Query: 188 HPA--LHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMA 245 P ++ P + + G E T A+ E + Sbjct: 193 GPPPVRTAQMAVEDLRDRPLVMFRRGYDLRDFTVGACRAAGFEPTFAIEGGEMDAVCGFV 252 Query: 246 AQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIV 305 L +A P + PL P L L + Sbjct: 253 MA--GLGIAVIPSMVA-----FRQPLRTTPFAAP-----GLHRTIGLAHRRDVEPPRAAR 300 Query: 306 WLRETIKNLYA 316 LR T+ + A Sbjct: 301 ELRATLVDFVA 311 >UniRef50_A1UYR8 Transcriptional regulator, LysR family n=32 Tax=Burkholderia RepID=A1UYR8_BURMS Length = 313 Score = 214 bits (547), Expect = 3e-54, Method: Composition-based stats. Identities = 76/319 (23%), Positives = 142/319 (44%), Gaps = 22/319 (6%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 ++ ++DLNLL+ L L+ ER VT+A +RI +T AVS +L +LR F D + + +PLG+ Sbjct: 1 MNLRSIDLNLLVILDALLAERQVTRAGQRIGLTQPAVSNALGRLRYVFKDEILMRTPLGM 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQT--PRGLKFELAAESPLMMIMLNALSKQIY 120 TP ++ + + +Q L + +F L +++ L + I Sbjct: 61 ELTPRAKALACPIRQILQQIEELFVPENQFDSFTSDRRFTLRMSDLTELLLPPPLLRNIR 120 Query: 121 QRYPQATIKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 P + + + + D +++A+ G +D+ H P AI +VLF D Sbjct: 121 GTAPHIRMNVMHLNADKTVEALDSGRLDMAVCAGLDH----------PDAISSQVLFQDR 170 Query: 180 PCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFE 239 L + HP ++ L+ F +++ D+ +D +L ++ R IA ++P + Sbjct: 171 LVCVLSRRHPDANRPLTLERFAALDFLNVSINPVDSSLIDTMLADMRFTRRIAFNVPHWL 230 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 M L + + R+ +L + LPL + V +TL WH+R Sbjct: 231 VVPSMLDA-LPLAVIMSERHALSLGDS-RLAIRELPLDLE-------PVTWTLYWHRRYD 281 Query: 300 HNPKIVWLRETIKNLYASM 318 ++ WLR I ++ ++ Sbjct: 282 NSVAHEWLRNCITDVVDAI 300 >UniRef50_C5BQI4 Transcriptional regulator, LysR family n=1 Tax=Teredinibacter turnerae T7901 RepID=C5BQI4_TERTT Length = 305 Score = 214 bits (547), Expect = 3e-54, Method: Composition-based stats. Identities = 44/303 (14%), Positives = 94/303 (31%), Gaps = 24/303 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +D+ L L + E+ V +AA+R++VT A+S+ L KL PLF G+ T Sbjct: 1 MDIKQLRYLVGIADEQHVGRAAERLHVTQPALSQQLRKLEEEIGSPLFERHHRGMRLTIA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQ-TPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 M ++ + + ++ + + ++ ++ + P Sbjct: 61 GQVMLKHARQILAQMEDARNEIDSLADTGECLVHIGTIQSMNFHLIPTAISRLQESEPNI 120 Query: 127 TIKLRNWDYDSLDA-ITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 +++ L+ + + ++D G L ++ + E LFS+ + + Sbjct: 121 HVRVAELSGSQLEDSVAKEKLDFGIGF----------LPTIREDLVTEQLFSENFYLAVH 170 Query: 186 KDHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 + HP Q + + D I + Sbjct: 171 RSHPLAEQEVVDFKQLHGLSMALLTDRYISRRLFDTAALRASIRPKIKVETNTTASL--- 227 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 LL+A + + + + + L+ L+W K N Sbjct: 228 ------LLIACVSQLAVVLPRAAIPEWIQSKVAMITLKNPTLQRSVGLIWGKNNVLT--H 279 Query: 305 VWL 307 L Sbjct: 280 QAL 282 >UniRef50_A6X639 Transcriptional regulator, LysR family n=1 Tax=Ochrobactrum anthropi ATCC 49188 RepID=A6X639_OCHA4 Length = 324 Score = 214 bits (547), Expect = 3e-54, Method: Composition-based stats. Identities = 81/335 (24%), Positives = 134/335 (40%), Gaps = 41/335 (12%) Query: 4 SITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLS 63 SI +DLNL+ LM+ER+VTKA +R+N+T SAVS +L KLR D LFV P G+ Sbjct: 3 SIHNIDLNLIRVFNALMEERNVTKAGERLNLTQSAVSHALGKLRYILSDELFVRGPQGMH 62 Query: 64 PTPLMVSMEQNLAEWMQMSNLLLDKP-HHQTPRGLKFELAAESPLMMIMLNALSKQIYQR 122 PTP + Q L + + L + F +A + + A+ +++ + Sbjct: 63 PTPRAEELSQPLRSALADISAALSPVQFDPATADMSFVVATSDFYIGTLFPAVMERLEKE 122 Query: 123 YPQATIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPC 181 P + LR ++ + ++ + RG + + +P E L S Sbjct: 123 APGIRLWLRLFNDLNLVEELDRGTLHLVVGA----------FGRIPSRFRRETLVSVDNV 172 Query: 182 VWLRKDHPALHQTWNLDTFLRYPHISICWEQ---------------------SDTWALDN 220 +RKDHPA ++T YPHI + S+ L+ Sbjct: 173 WIMRKDHPASSGPLTIETLGHYPHIDVLLSGRAAMEAAGMQEQEGLERAFVTSNPPFLEG 232 Query: 221 VLQELGRERTIAMSLPEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDE 280 +L+E+G R I ++ + A + + L + Y + L L P P Sbjct: 233 LLREVGLSRRIGATVSLILAVPPLVAATNMIAL-LPRSVAETYKDTYGLVLHEAPYPLPA 291 Query: 281 SQQKKLEVPFTLLWHKRNSHNPKIVWLRETIKNLY 315 +Q +L H +P + WLR ++ Sbjct: 292 TQ-------INMLSHNTFGAHPAVAWLRSVLREAI 319 >UniRef50_C5CZY6 Transcriptional regulator, LysR family n=1 Tax=Variovorax paradoxus S110 RepID=C5CZY6_VARPS Length = 325 Score = 214 bits (547), Expect = 3e-54, Method: Composition-based stats. Identities = 76/325 (23%), Positives = 135/325 (41%), Gaps = 24/325 (7%) Query: 1 MKKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPL 60 M +S +D++LL L L+ ERSV++AA R+N T A+S +L +LR F DP+ V Sbjct: 1 MTRSQDLVDIHLLRVLAALVAERSVSRAAVRMNQTQPAISAALRRLRDAFGDPILVRERG 60 Query: 61 GLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTP--RGLKFELAAESPLMMIMLNALSKQ 118 G+ PT + + ++ E + + +L P P + F +A L + + + Sbjct: 61 GMVPTARALQLRESAREVLGEIDRMLAGPERFEPGASTMTFTIATPDYLAASFMAEVVAR 120 Query: 119 IYQRYPQATIKLRNWDY--DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLF 176 PQA + + D A+ +GE+DI P + +L Sbjct: 121 FRAEAPQARLLIHPLTPGYDYERALAQGELDIVIGNWPLP----------PERMHLSLLI 170 Query: 177 SDVPCVWLRKDHPALH-QTWNLDTFLRYPHISICW-EQSDTWALDNVLQELGRERTIAMS 234 D + +P L +L H+ +S +D+ L L + R + Sbjct: 171 EDELVCMMSPGNPLAAPGAMTLQRYLAAAHVVPTPFAKSHRAVVDSHLAGLRQTRDARVF 230 Query: 235 LPEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLW 294 +P + + ++ A+ D L+ TA + + + + + VA P F + F LW Sbjct: 231 VPYYAMAPYLVAESD-LVFTTARHFAEQFTRSLPVVSVAAPEGFPRMR-------FYQLW 282 Query: 295 HKRNSHNPKIVWLRETIKNLYASMA 319 H+R+ H WLR + + +A Sbjct: 283 HERSQHQGAHRWLRSLLSTVGGHLA 307 >UniRef50_Q88LJ0 Transcriptional regulator, LysR family n=1 Tax=Pseudomonas putida KT2440 RepID=Q88LJ0_PSEPK Length = 320 Score = 214 bits (547), Expect = 3e-54, Method: Composition-based stats. Identities = 57/297 (19%), Positives = 130/297 (43%), Gaps = 21/297 (7%) Query: 20 MQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSMEQNLAEWM 79 +E++++ AA+R+ ++ S SL +LR +F+D LF+++ G+ PTP VS+ +++ + Sbjct: 18 YREQNLSAAARRLGMSQPMASASLRRLREYFEDQLFLSTGRGMRPTPFTVSIAASVSGVL 77 Query: 80 QMS--NLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQATIKLRNWDYDS 137 + +L F ++ +I + + +++ + P ++ + + Sbjct: 78 ERIKHEILAKPAFQPRQSDRLFTISTSDIGALIFVPPILRRLGEDAPNTDLRCVSLPHQQ 137 Query: 138 LD-AITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPALHQTWN 196 L+ A+ +G VD+ + + + LF +R++HP++ T + Sbjct: 138 LEQALEQGSVDLAVGYFPDLQGEQ---------VKTQALFEHNFTCIVRRNHPSIGDTLS 188 Query: 197 LDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQPDNLLLATA 256 L+ FL H+ + E + L+EL +R + + +P F + A + +AT Sbjct: 189 LEQFLAADHLVVNQEGRSQEIFEQRLRELKLQRRVHLEVPHFMSVPQLIASTNM--VATV 246 Query: 257 PRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWLRETIKN 313 P + Q+ ++ P+ ++ L WH++ +P + W R + Sbjct: 247 PLSLGVWFASEQIKMLTPPIEVEK-------FELKLHWHRQMEDDPAVSWFRNAVFE 296 >UniRef50_A4J1K6 Transcriptional regulator, LysR family n=1 Tax=Desulfotomaculum reducens MI-1 RepID=A4J1K6_DESRM Length = 308 Score = 214 bits (547), Expect = 3e-54, Method: Composition-based stats. Identities = 37/318 (11%), Positives = 98/318 (30%), Gaps = 26/318 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 L L + + ++S + AA+ + ++ AVS + L F LF + ++ T Sbjct: 3 LSLYQFHIFKTVADKKSFSGAAQALYISQPAVSMHIKALEDHFRTKLFDRNTQQVTITEA 62 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTP-RGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + + + + + + T + A + ++ + + +PQ Sbjct: 63 GRILYKYADKILNLIDQAENDISRFTGNIEGPLSIGASFTVGEYVIPKILGTFNKEHPQV 122 Query: 127 T--IKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 +++ ++ + + E+D+G + + + + D + + Sbjct: 123 RALLQV-TNTEQIVNLVLKQEIDLGLIENQVNKT----------ELVAKPFLQDELIIVI 171 Query: 185 RKDHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGR---ERTIAMSLPEFEQ 240 D+P +++ + P + + L E G I M L E Sbjct: 172 PPDYPLSEHQFISMEDLVALPLVMREQGSGTRKITEARLIEEGVDLNTLNIVMELGSTEA 231 Query: 241 SLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 ++ LV + + L F L++H+ Sbjct: 232 VKEAVEA--GFGTTIISKWAVQKELKLG-TLVPVRF-----KDISLFRKFYLIYHRDKFQ 283 Query: 301 NPKIVWLRETIKNLYASM 318 + + + + + Sbjct: 284 TTVVEEFITFLISFCSGI 301 >UniRef50_B7RV99 Transcriptional regulator, LysR family protein n=1 Tax=marine gamma proteobacterium HTCC2148 RepID=B7RV99_9GAMM Length = 303 Score = 214 bits (547), Expect = 3e-54, Method: Composition-based stats. Identities = 71/318 (22%), Positives = 132/318 (41%), Gaps = 25/318 (7%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 + +DLNL + L +ERSVT+ A+ +++T AVS +L++LR FDD LFV SP G+ Sbjct: 1 MRLDKVDLNLFVVFDALYRERSVTRVAQALHLTQPAVSNALSRLRQSFDDQLFVRSPRGM 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTP--RGLKFELAAESPLMMIMLNALSKQIY 120 PTP+ ++ ++ + + + P + F L ++L L + Sbjct: 61 QPTPVAEAISVDVQKALGLLQKTTLSGQRFDPGSAEMTFRLGMSDVAQNMVLPGLHNALA 120 Query: 121 QRYPQATIKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 Q P TI+ D ++ + G++D+ + + R + L S + Sbjct: 121 QLAPGVTIEAYYLDRASAVAQLKSGDLDLLLDAPQVNAR----------ELGQLHLGSLL 170 Query: 180 PCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFE 239 V + K HP ++D +L H+ + +D L +G R + + + ++ Sbjct: 171 YRVAMAKAHPLAQVDLDIDQYLAAKHVHVSARPRGRGQVDLALHAIGHRRKVVVRVQQYA 230 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 + + AQ D L A +L +V P + L WH+ + Sbjct: 231 VAAAITAQSDLLWTAPGSVI-----DHPELHVVETPFQVESLV-------LNLYWHRSAA 278 Query: 300 HNPKIVWLRETIKNLYAS 317 +P W+R+ + +A Sbjct: 279 EDPANAWMRKMLAQQFAE 296 >UniRef50_C6Q0M3 Transcriptional regulator, LysR family n=1 Tax=Clostridium carboxidivorans P7 RepID=C6Q0M3_9CLOT Length = 311 Score = 214 bits (547), Expect = 3e-54, Method: Composition-based stats. Identities = 43/322 (13%), Positives = 106/322 (32%), Gaps = 32/322 (9%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +D L + + +E++ +KAA ++ ++ ++S+ + K+ LF S L T Sbjct: 1 MDFRQLQYVLTVAEEKNFSKAAHKLFISQPSLSQYIQKIELELGTQLFDRSSSPLKLTFA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + + + L + + R + + ++ + + ++P Sbjct: 61 GELYIETAKNILDLKDQLYQQINDIANRKKGRVIIGLSPVRSTYIMPKILPIFHDKFPDI 120 Query: 127 TIKLRNWDYDSLDAIT-RGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + L +L+ + +G DI +D+E +FS+ V + Sbjct: 121 EVVLIEDISSTLETLAVKGSTDIDLITTPMKNDM----------LDFETIFSEEILVVIP 170 Query: 186 KDHPALHQ------------TWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAM 233 +HP + T L P I + +Q ++ ++ G I + Sbjct: 171 PNHPIQSKIKYKTSAKSTHPTIELKELKNEPFILLKRDQKLHKMATSLCEQAGFSPRIIL 230 Query: 234 SLPEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLL 293 E + +A + + P +Q PL + + + + Sbjct: 231 ESESIEAAHALAKA--GMGITFVPDTLISAHQTEPYPL------YCSIDKLRPTRDVIVA 282 Query: 294 WHKRNSHNPKIVWLRETIKNLY 315 + K + +K ++ Sbjct: 283 YKKGRYLSVAAKEFISILKTVF 304 >UniRef50_C7RD08 Transcriptional regulator, LysR family n=1 Tax=Kangiella koreensis DSM 16069 RepID=C7RD08_KANKD Length = 319 Score = 214 bits (547), Expect = 3e-54, Method: Composition-based stats. Identities = 61/322 (18%), Positives = 133/322 (41%), Gaps = 21/322 (6%) Query: 1 MKK---SITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVN 57 M +I +LD+NLL+ L +L++E+ ++ AA R++++ AVS+SL +LR +DPL + Sbjct: 1 MVMQVENIRSLDMNLLVLLDVLLEEKHISNAADRLHMSQPAVSRSLQRLRDMLNDPLLIR 60 Query: 58 SPLGLSPTPLMVSMEQNLAEWMQMSNLLLD-KPHHQTPRGLKFELAAESPLMMIMLNALS 116 G T + ++ L W+ ++ + + + + M + + L Sbjct: 61 VGNGYQLTDKALELQPKLKSWLADFMCMMQPEKFEPAKAKGEISIMSMDLEMSLFMPNLW 120 Query: 117 KQIYQRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLF 176 + + + P ++ N D + + +G++D S + S + + L Sbjct: 121 QDLQVQAPNVALRSFNIRPDGISLLEQGDIDFLVSEEDKSLESTK--------YHHYHLI 172 Query: 177 SDVPCVWLRKDHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSL 235 + + K H + +D +L+ H + +D L++ G R IA+ + Sbjct: 173 QHEFVLVMSKQHRLAKQKAIGMDEYLKQRHGLVTVTGKGKPFIDRTLEKQGLSRNIALYV 232 Query: 236 PEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWH 295 P F +L + ++ D L+ + + + + + + +PL + L WH Sbjct: 233 PTFHLALDICSRTD-LMFSMPRLVAEKEGERYGVVMKEMPLKLPL-------LDIYLYWH 284 Query: 296 KRNSHNPKIVWLRETIKNLYAS 317 +R W R ++ + Sbjct: 285 ERQHQTALHKWFRTLMRESFEQ 306 >UniRef50_B7X0F3 Transcriptional regulator, LysR family n=1 Tax=Comamonas testosteroni KF-1 RepID=B7X0F3_COMTE Length = 307 Score = 214 bits (546), Expect = 3e-54, Method: Composition-based stats. Identities = 59/315 (18%), Positives = 116/315 (36%), Gaps = 24/315 (7%) Query: 1 MKKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPL 60 M+ + + L L + + RS T AA +++T SAVSK A+L + PLF + Sbjct: 1 MRMN---VTLRQLRVFCAVYERRSFTSAADDMHMTQSAVSKLCAELESEIGLPLFERTTR 57 Query: 61 GLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQI 119 ++P + + E + L + +AA +M +L + + Sbjct: 58 RVTPCDGAAELYEYAQEVLNTMRLAGRRLSALRTLDQGNLSIAASPMMMSGLLAPVIEAF 117 Query: 120 YQRYPQATIKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSD 178 + +P+ I L D S+D + G D G ++ ++ +V+ ++ Sbjct: 118 ARDHPKVRIDLHELTTDESVDYVRTGRCDFGLVS----------IAEHDPQLEPKVVCAE 167 Query: 179 VPCVWLRKDHPA-LHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPE 237 + C+ HP + YPHI++ S +D +L+ G E + Sbjct: 168 LLCLACTPSHPLAAKKRITWGEASDYPHITLRSVYSTRKTIDRILKAQGLELRSTIQAGT 227 Query: 238 FEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKR 297 SL + NL + P Y + + Q L + + +K +LL + Sbjct: 228 LATSLRLVKA--NLGVTLIPSYAREFAQDLGLKV------MEIYDKKPYPHELSLLTRRG 279 Query: 298 NSHNPKIVWLRETIK 312 + + ++ Sbjct: 280 LKPSIAATAFMDALQ 294 >UniRef50_Q1AYT0 Transcriptional regulator, LysR family n=1 Tax=Rubrobacter xylanophilus DSM 9941 RepID=Q1AYT0_RUBXD Length = 293 Score = 214 bits (546), Expect = 3e-54, Method: Composition-based stats. Identities = 51/314 (16%), Positives = 109/314 (34%), Gaps = 26/314 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L+ + +E +AA+R++VT ++SK +A L LF + + T Sbjct: 1 MELSHIRYFVAAAEELHFGRAARRLHVTQPSLSKRVAGLERELGVRLFHRTRREVRLTEA 60 Query: 68 MVSMEQNLAEWMQM-SNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + ++ + + E+ SP + +L + K+ ++R+P+ Sbjct: 61 GEIFLEGARRVLEDALRAAEEARKAGRGELGRLEIGFFSPAIYGVLPEILKEYHERFPEV 120 Query: 127 TIKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + L W L+ + G+++IGF E +F + L Sbjct: 121 RVTLHEWTSSVQLERMREGKIEIGFMRAPVEEA----------GFVTEHVFVEPVVAALP 170 Query: 186 KDHPALHQT-WNLDTFLRYPHISICWE--QSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 + HP + + P I + + ++ Q G I + E + Sbjct: 171 EGHPQARREVVSPRELADEPFIMVPRSKEPNSFDRYVSICQRAGFSPKITQEVFEIHAIV 230 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 + A + +A L + +V PL E++ V + + +P Sbjct: 231 GLVAT--GMGVAFVQGSV---ANLKRPGVVYRPLDDPEARIGTAIV------RRSSRPSP 279 Query: 303 KIVWLRETIKNLYA 316 + ET++ A Sbjct: 280 VLRTFLETLQAFVA 293 >UniRef50_A1U796 Transcriptional regulator, LysR family n=3 Tax=Marinobacter RepID=A1U796_MARAV Length = 303 Score = 214 bits (546), Expect = 3e-54, Method: Composition-based stats. Identities = 70/316 (22%), Positives = 124/316 (39%), Gaps = 23/316 (7%) Query: 4 SITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLS 63 + +LDL L ++ E SV++AA R+ VT SAVS +L +LR F DPLFV S G+ Sbjct: 5 DMLSLDLRSLATFVAVLDEGSVSRAAVRLGVTQSAVSHTLERLRQAFGDPLFVKSGRGIV 64 Query: 64 PTPLMVSMEQNLAEWMQMSNLLLD-KPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQR 122 PT + ++ + + L P F +AA ++L L + + Q+ Sbjct: 65 PTDYALRTGPHIRQLLDDLRTLPSGPPFEPASAEFTFTIAANDYQRDLLLPGLLRILRQQ 124 Query: 123 YPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCV 182 P +++ + D + + D+ S I L +D V Sbjct: 125 APGIRLQVIPSGIPNADMLRKEACDLIISPHAPETT----------DIMQRGLMADRMVV 174 Query: 183 WLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 + + +L +L+ HI++ + + +N L G +R +++ F Sbjct: 175 FYDPNQRNA--PTDLAEYLKADHIALMFATGERPGFENTLHAKGLDRRNVVTVANFSGLP 232 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 D L A Q V LP + +LWH+R+ ++P Sbjct: 233 EFLRGTDMLATAPERMSAQLMRD---FAWVPLPFDY-------KPFTLLMLWHRRHQNDP 282 Query: 303 KIVWLRETIKNLYASM 318 W+R + ++ A+M Sbjct: 283 AHRWVRNQVNSVAATM 298 >UniRef50_Q7MEK1 Transcriptional regulator n=15 Tax=Vibrionaceae RepID=Q7MEK1_VIBVY Length = 307 Score = 214 bits (546), Expect = 3e-54, Method: Composition-based stats. Identities = 64/320 (20%), Positives = 119/320 (37%), Gaps = 21/320 (6%) Query: 2 KKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLG 61 + ++ DLNL+ + +E++++KAA R++++ AVSK+LA+LR +D+PLF SP G Sbjct: 4 RFAMKNTDLNLIPIFVAIFEEQNLSKAAARLDISQPAVSKALARLRDIYDEPLFHRSPSG 63 Query: 62 LSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTP--RGLKFELAAESPLMMIMLNALSKQI 119 + PT V + + + L F +A S ++ L KQI Sbjct: 64 VEPTSFAVDIYPAMLTAFKNFTSTLSASSEFEAKVSNRIFSIACVSVASYELMPQLLKQI 123 Query: 120 YQRYPQATIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSD 178 Q P ++++ D + D+ + + E +FS+ Sbjct: 124 RQHAPNISLEVHPLFTEDYESDLRLQRYDLIIDMAPRGWTT----------LKVEPIFSE 173 Query: 179 VPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEF 238 V DHP + ++ FL H+ + + + +R IA Sbjct: 174 RLMVVCCADHPRIADACSVAQFLAEEHVVVSRWHARKSLMSAEDIADLAKRKIAYRASGA 233 Query: 239 EQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRN 298 + L + + + + + + + V+LP D +WH Sbjct: 234 LEMLPVIHGSEYIGM-LPESTINAFAGTYNIKAVSLPFDHDV-------YDLCAIWHPSR 285 Query: 299 SHNPKIVWLRETIKNLYASM 318 S WLR +K + Sbjct: 286 SSESAHQWLRNQLKAAVKVL 305 >UniRef50_C6MCJ5 Transcriptional regulator, LysR family n=1 Tax=Nitrosomonas sp. AL212 RepID=C6MCJ5_9PROT Length = 298 Score = 214 bits (546), Expect = 4e-54, Method: Composition-based stats. Identities = 48/314 (15%), Positives = 108/314 (34%), Gaps = 19/314 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 + L+ L + + S+TKAA+ ++ ++S+ L KL LF L T Sbjct: 1 MQLHQLKYFVSVAKTGSITKAAEACFISQPSLSQQLKKLEGIVGKRLFSRIKGKLVLTKP 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTP-RGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + ++ + ++ + + G + L +L + + + Q+YPQA Sbjct: 61 GQILYEHACKILRSVDDAKVEMKEVDQNSGGLIRVGILPTLAPFILPKILESLSQKYPQA 120 Query: 127 TIKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + +R + L +A + GE+DI E+L + E LF D + + Sbjct: 121 NVIIREEVSEVLINAASCGELDILI----------EVLPFDQSNLTIESLFFDTFYLAVH 170 Query: 186 KDHPALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 ++ P + +++ P I + T +++ + + Sbjct: 171 QNSPLAKLKEVHVNQLEGMPFILLEDIHCLTKQIEHFCFNENFIPKAVFQASQIGTIKLL 230 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 ++ P + + + + ++ L +P Sbjct: 231 IESQ--YGISILPSISMKHKDEQNICY----IKLIGNDKQIPGREVVLAISNDRYLSPAA 284 Query: 305 VWLRETIKNLYASM 318 +L +TIK + +M Sbjct: 285 SFLIKTIKEHFRNM 298 >UniRef50_B5XVV4 Transcriptional regulator cynR n=5 Tax=Enterobacteriaceae RepID=B5XVV4_KLEP3 Length = 313 Score = 214 bits (546), Expect = 4e-54, Method: Composition-based stats. Identities = 51/314 (16%), Positives = 105/314 (33%), Gaps = 24/314 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 + L L + + R T+AA ++V+ A+S+ + +L A + LF S T Sbjct: 1 MLLRHLSYFIAVAEHRGFTRAAAALHVSQPALSQQIRQLEAMLEVQLFDRSGRYTRLTDA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQ-TPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + ++ H + K +A +L L + Y+RYP Sbjct: 61 GEIWLEYARRVLRDLEEGRRALHDAEDLQRGKLRIAMTPTFTTYVLGPLVEAYYRRYPGV 120 Query: 127 TIKLRNWDYDSLD-AITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + ++ + + ++ + E+D+G + E SL I + L ++ + + Sbjct: 121 KLLIQEMNQERMETMLLEDELDVGIAFDE----------SLSRDIVVQPLLTETLALVVS 170 Query: 186 KDHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 + HP H++ L P I + E + +D + E + M L + Sbjct: 171 RAHPLAHESHLQLQALDAQPLILLSSEFATREQIDRYCRRHRLEPDVRMEANSIGAVLTV 230 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 L Y+ L + L L+ LL + + Sbjct: 231 IRGTL-LATLLPAAIAGQYDDLVAIELKP----------ALLQRTACLLQRQGAWQSAAA 279 Query: 305 VWLRETIKNLYASM 318 + + A++ Sbjct: 280 REFIALAREIAATL 293 >UniRef50_A9WIA6 LysR substrate-binding n=4 Tax=Chloroflexaceae RepID=A9WIA6_CHLAA Length = 307 Score = 214 bits (546), Expect = 4e-54, Method: Composition-based stats. Identities = 53/303 (17%), Positives = 103/303 (33%), Gaps = 19/303 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 L+L+LL ++++ S TKAA+ + ++ SAVS+++ +L L G++PT Sbjct: 17 LNLHLLRIYVAVLEQGSFTKAAEVLTMSQSAVSRAVQELERQLGTTLLERRARGVAPTMA 76 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + ++ L ++ + + + A S + + +L L ++RYP Sbjct: 77 GTILGEHARRIFTHERLAIEALNELRGLQRGRLAIGASSTIGIYLLPPLLGNYHRRYPGI 136 Query: 127 TIKL-RNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + L ++ + ++D+ + + SD V Sbjct: 137 ELFLDIGNTQQIIERLLSYQIDVAYVEGPVAANE---------DLQVVPWRSDEMVVIAS 187 Query: 186 KDHPALHQ-TWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 DHP + T + P I ++ L M L E Sbjct: 188 PDHPLTRRVTLDCSDLQDAPFIMREPGSGTRKVMEQALAAHNVTVRPVMELGSTEAVKQA 247 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 + L L+ R+ ++L L L +P Q++ V H R Sbjct: 248 VSA--GLGLSMVSRFTIQ-SELIAGKLRVLNIPGLNIQRQLSRVRL----HDRPQSLALE 300 Query: 305 VWL 307 W Sbjct: 301 AWF 303 >UniRef50_A0JW61 Transcriptional regulator, LysR family n=1 Tax=Arthrobacter sp. FB24 RepID=A0JW61_ARTS2 Length = 295 Score = 214 bits (546), Expect = 4e-54, Method: Composition-based stats. Identities = 66/315 (20%), Positives = 113/315 (35%), Gaps = 23/315 (7%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 + LDLNL+ + + RS+T+ A + +T +VS +L++LR DPLF G++P Sbjct: 1 MADLDLNLVKTFVSIYETRSLTQTAAEMCITQPSVSHALSRLRRQLGDPLFTRGAGGMTP 60 Query: 65 TPLMVSMEQNLAEWMQMSNLLLDKPHHQTP--RGLKFELAAESPLMMIMLNALSKQIYQR 122 T + V + + +L +D P F L M L AL K++ Sbjct: 61 TRVAVELFSTFKASLNAIDLAIDGTRDFDPTTSSRTFRLCLSDLGEMAFLPALMKRLLDS 120 Query: 123 YPQATIKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPC 181 PQ +++ D + + + G VD + I V+ + Sbjct: 121 APQIVLEVVPMQIDKVSEWLAHGAVDAAIASVPIGGA-----------IRSRVIDQEHYV 169 Query: 182 VWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQS 241 L L + L F H+ I + + + LG ER IA+ L F Sbjct: 170 CVLPDGAGGLAEKMTLSQFTGMRHVVIDP-SAGHHLAEAEIAALGIERNIALRLHHFSVL 228 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 + NL R + + + L + LP +L W+ + Sbjct: 229 P-LVLAGQNLAAIVPSRVARMFTEQAPLTIRELPFNVP-------SFDVSLYWNGTAPRS 280 Query: 302 PKIVWLRETIKNLYA 316 + W ET+ + Sbjct: 281 RALRWFHETVADSLN 295 >UniRef50_UPI0001C3192A transcriptional regulator, LysR family n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C3192A Length = 343 Score = 214 bits (545), Expect = 4e-54, Method: Composition-based stats. Identities = 52/300 (17%), Positives = 96/300 (32%), Gaps = 21/300 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L + +E S T+AA R++V VS + +L A + L S + PT Sbjct: 1 MELRQLEYFVAVAEEASFTRAAARLHVAQPGVSAQVRRLEAELGEQLLDRSGRSVRPTEA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 V++ + + + T + + S +L L + +P Sbjct: 61 GVAVLPHARAALASVGAVRGAIEELTGLVRGRVAIGMVSSYPSAVLPDLLASFSRLHPDV 120 Query: 127 TIKL-RNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 I L + + A+ GE+D+ G P + + L + + Sbjct: 121 EITLGEDNSDRLVQALQHGELDLALIGSARTGP--------PPGLATQTLTDEPLVAAVS 172 Query: 186 KDHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 HP T + P + + ALD+ G E IA + + Sbjct: 173 HTHPLATRSTLTVAALAGSPLMCLPRGTGIRTALDDACATAGVEPRIAFEASDPVPLALL 232 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 AA+ + + A +LH + L + + L W +P Sbjct: 233 AARGLGVAILPASLAAARSGELHAIAL----------TRPQPRGRIELAWRAEGPVSPAA 282 >UniRef50_Q31FC6 Transcriptional regulator, LysR family n=7 Tax=Proteobacteria RepID=Q31FC6_THICR Length = 318 Score = 214 bits (545), Expect = 4e-54, Method: Composition-based stats. Identities = 49/315 (15%), Positives = 105/315 (33%), Gaps = 25/315 (7%) Query: 11 NLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVS 70 L + + S TKAA+ +++T AV+ + +L +F+ LF + ++ T Sbjct: 4 RRLQVFYTVAKVLSFTKAAETLHMTQPAVTFQVKQLEEFFNTRLFDRTHNKITLTDAGKI 63 Query: 71 MEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQIYQRYPQATIK 129 + + + + + T + A + + ML +L +++ I+ Sbjct: 64 VYDYAEKILDHYEKMNSEVRELTGEVTGSLLIGASTTIAEYMLPSLLGAFKKQFEDVNIR 123 Query: 130 LRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDH 188 L+ + D + + +D+G ++ EV D + + H Sbjct: 124 LQVGNTDAIVAMVENNMIDLGVVEAPV----------YNKNLEVEVCRLDEMVLIVPHGH 173 Query: 189 PAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRE---RTIAMSLPEFEQSLFM 244 P +++ +Y +IS +DN ++E G + M L E Sbjct: 174 PLSNRDKISIEDMRKYRYISREEGSGSRSVIDNYIREQGLSYSDLNVVMELGSPEAVKMA 233 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 L + + +L L + L P PF+ + K + + Sbjct: 234 VESDVGLAI-VSRTTISKELKLGTLKALPLDPPL--------NRPFSHVRQKHKFRHRAV 284 Query: 305 VWLRETIKNLYASMA 319 L + + A Sbjct: 285 GELLDFAVDYCKEKA 299 >UniRef50_B4ELV6 LysR family regulatory protein n=1 Tax=Burkholderia cenocepacia J2315 RepID=B4ELV6_BURCJ Length = 306 Score = 214 bits (545), Expect = 5e-54, Method: Composition-based stats. Identities = 67/299 (22%), Positives = 121/299 (40%), Gaps = 17/299 (5%) Query: 22 ERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSMEQNLAEWMQM 81 ERSVT+A R+ +T A S++L +LR D + V +P GL TP S+ Q ++ + Sbjct: 23 ERSVTRAGMRLGLTQPAASRALGRLRTLLHDRVVVRTPKGLEFTPRAASLAQRVSRVLTE 82 Query: 82 SNLLLD-KPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQATIKLRNWDYDSLDA 140 + ++ F +A+ + + ++ ++ ++ + P + + ++++ Sbjct: 83 AAGIVAPAVFDPATARGLFSIASLDHMALTLIPDVNARLERSAPGLDLDVPPSRSNNVEL 142 Query: 141 ITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPALHQTWNLDTF 200 +T G I + LP I L+ D +R HPAL F Sbjct: 143 VTDGTAGIALGVFDDDT--------LPAGIYRRKLYDDNLVCIVRNGHPALSARLTPKRF 194 Query: 201 LRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQPDNLLLATAPRYC 260 H+ + +D L G R IAM LP F + + A+ D + L R Sbjct: 195 AALSHVLVTIGGRGGELVDAALARQGLHRRIAMRLPHFLVAPMVVAKSD-MTLVLPQRLA 253 Query: 261 QYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWLRETIKNLYASMA 319 ++ + LV LP+ +++WH+R +P WLR+ I + M Sbjct: 254 RHVALSMPVTLVKLPVEVPSFSP-------SMIWHERTHDDPAHGWLRQQIVEVAREMG 305 >UniRef50_A3KIZ0 Putative LysR-family transcriptional regulatory protein n=3 Tax=Streptomyces RepID=A3KIZ0_STRAM Length = 312 Score = 214 bits (545), Expect = 5e-54, Method: Composition-based stats. Identities = 71/318 (22%), Positives = 120/318 (37%), Gaps = 25/318 (7%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 + T DLNL LL + SVT A+ ++VT VS SL KLR F D LF + GL+P Sbjct: 1 MGTFDLNLARVFVLLYETGSVTATAETLHVTQPTVSYSLGKLRRHFGDELFRRNGRGLTP 60 Query: 65 TPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQIYQR 122 T + + L + + + + +F +A +L L +R Sbjct: 61 TAGARRLYEPLQRALAEIDGTVRQGDAFDAGTMSGRFTIALSDLGEATLLPRLLAAARER 120 Query: 123 YPQATIKLRNWD-YDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPC 181 P + +R +D D+ + RG++D+ + + LF + Sbjct: 121 APGVSFTVRPFDVEDAESQLRRGDLDVFVATPVITSHLTVRIP----------LFRERYV 170 Query: 182 VWLRKDHPALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQ 240 + + DHP + L H ++ + S A VL G +A+ F Sbjct: 171 LMVAADHPRVRGDEVTLAGLAAEHHATV-FGPSGHVAPRAVLAAHGLLERVAVDATRFSM 229 Query: 241 SLFMAAQPDNLLLATAPRYC-QYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 ++ Q D L+A P Y + + H++ LV LP + L +S Sbjct: 230 LPYLLEQTD--LVAIVPEYVGEVFTASHRVRLVRLPFE-------TQPIEIALYARHESS 280 Query: 300 HNPKIVWLRETIKNLYAS 317 +P WL + + + Sbjct: 281 RSPAQRWLVQFMAEVLGE 298 >UniRef50_Q826F8 Putative LysR-family transcriptional regulator n=2 Tax=Streptomyces RepID=Q826F8_STRAW Length = 296 Score = 213 bits (544), Expect = 5e-54, Method: Composition-based stats. Identities = 52/309 (16%), Positives = 105/309 (33%), Gaps = 25/309 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L + +E S T+AA+R++V S VS ++ L LF + + T Sbjct: 1 MELRQLEHFIAVAEELSFTRAARRLHVVQSGVSAAIRSLERELGCALFERTSQQVRLTGA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQ-TPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 ++ + + D + A + + ++ L AL Q++ R+P Sbjct: 61 GAALLPEARATLHAAQAAQDAVRAAQDTLRGTVNVGAMASVEVVDLPALLGQLHARHPAI 120 Query: 127 TIKLR---NWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVW 183 ++LR A+ G++D+ F H P ID L + + Sbjct: 121 DVRLRLATTGSAGLAHALLSGDLDVAFLSLPEHK---------PAGIDARELATVPLVLV 171 Query: 184 LRKDHPALHQ-TWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 + DHP + L P + + +D G R +A+ +P+ + Sbjct: 172 VSADHPLAQRGEVALADLAAEPFVDFPPGYGNREVVDRAFAGAGVVRRVALEVPDIDMGA 231 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 + L +A P + + L ++ + L L + Sbjct: 232 ALVRH--GLGIAFLPAFAV--ARTPGLHVLDV-------HGTMLRWSMHLGTSSTRRPSS 280 Query: 303 KIVWLRETI 311 + L + + Sbjct: 281 ALRALLDLV 289 >UniRef50_UPI00016945D8 transcriptional regulator, LysR family protein n=1 Tax=Paenibacillus larvae subsp. larvae BRL-230010 RepID=UPI00016945D8 Length = 292 Score = 213 bits (544), Expect = 6e-54, Method: Composition-based stats. Identities = 45/312 (14%), Positives = 103/312 (33%), Gaps = 25/312 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L Q + + + +TKAA+ +++ S++S+++++L LF + Sbjct: 1 MELLQLKYFQKVAKIQHMTKAAQELHIAQSSLSRTISRLEEDLGVSLFERKGRQIHLNMF 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + ++ + + A + +L L K+ +P Sbjct: 61 GQRFLNRVERIFTELEEGTEEIAELQGIENKRVVVGAT---ITRLLPDLFKEFLTVHPDV 117 Query: 127 TIKLRNWD-YDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 +L + + + I +G +D S H I + ++ + + Sbjct: 118 KFQLFQFSTTEIQEQIQQGTIDFCISSPPIHQS----------GIVSIPIMTEEFFLAVP 167 Query: 186 KDHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 ++H +T L IS+ + S ++ ++ G + I + E + Sbjct: 168 QNHYLANRRTVKLSDIAEESFISLTMDYSFQESIYSLCIRSGFKPKIMFESNDLEVIGKL 227 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 D +A P Y N+ V P+ + L W +R + Sbjct: 228 V--TDGFGVAFMPAYWWKENK------VNSPVKIR-IDSPYYQRIIGLSWKERCYLSNVA 278 Query: 305 VWLRETIKNLYA 316 RE ++ Sbjct: 279 SDFREFTIQYFS 290 >UniRef50_B9Y467 Putative uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y467_9FIRM Length = 309 Score = 213 bits (544), Expect = 6e-54, Method: Composition-based stats. Identities = 42/308 (13%), Positives = 95/308 (30%), Gaps = 21/308 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 + L L + + S+TKAA+ ++++ AVS ++ +L ++ LF L T Sbjct: 1 MTLRHLRIFVEVCRTGSITKAAESLHLSQPAVSLAIRQLEDYYGILLFDRISKKLYLTES 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQAT 127 M + ++ + + + + + + ML L ++ R+PQ Sbjct: 61 GNKMLSYASHIIESFDDMETQLKNWDSA-GTLRIGSSISTGTQMLPQLVRRFNLRFPQIR 119 Query: 128 IKLRNWDYDSLDA-ITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRK 186 ++ + ++ + ++D+ S I ++D V Sbjct: 120 TQVLIDNSRIIEDKVLTNQLDLALVESL----------SYSPDIVCVPFYTDRLIVITAP 169 Query: 187 DHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMA 245 HP + YP + +D +L + T + Sbjct: 170 KHPLTQNPECTVKALADYPVLLREPGSGTREVVDALLVTAEVQITPLWESTSTRSIINAV 229 Query: 246 AQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIV 305 + N+ ++ P + LPL +++ H+ P Sbjct: 230 KE--NIGISILPYELVKNEIQSG-AVAGLPLASPLPN-----RTCSIIHHRNKYLTPSAQ 281 Query: 306 WLRETIKN 313 E + Sbjct: 282 AFIEVCQE 289 >UniRef50_Q67SW7 LysR family transcriptional regulator n=1 Tax=Symbiobacterium thermophilum RepID=Q67SW7_SYMTH Length = 305 Score = 213 bits (544), Expect = 6e-54, Method: Composition-based stats. Identities = 42/312 (13%), Positives = 90/312 (28%), Gaps = 19/312 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +D+ L + + S +AA+R+ +T +V+ + L LF P G+ T Sbjct: 1 MDVQGLEAFWWIAKTGSFNRAAERLFLTQPSVTARIQALEKELGQQLFERRPRGVRLTDA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNALSKQIYQRYPQA 126 ++ + +Q + + +L + + + YP Sbjct: 61 GRALLPHAERVLQDIKRARQAVLDLQTASGGTLSVGSALTTSAYLLPDILLRFKRGYPNV 120 Query: 127 TIKLRNWDYDSLDAI-TRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + + + + V +G I L + + + Sbjct: 121 EVLVHTGRSHQVQQLVLDDTVQVGLVHAPLPS---------HAEIVSYPLSEEPILLVVP 171 Query: 186 KDHPALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 DHP LD + I+ ++ G I M L E + M Sbjct: 172 PDHPVARHSEVTLDELTQESFITTDRASGYWALVEQWWASQGFVPHITMELDSIEAAKRM 231 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 L L P +VA+PL + +++ L+ + + Sbjct: 232 VLC--GLGLTMLPYSTVKSEIELS-QVVAVPLANSATLKRQNI----LIHRRGKIWSGTA 284 Query: 305 VWLRETIKNLYA 316 ++ ++ Sbjct: 285 KAFLRVLEEMFQ 296 >UniRef50_B1HQK1 HTH-type transcriptional regulator n=3 Tax=Bacillales RepID=B1HQK1_LYSSC Length = 297 Score = 213 bits (544), Expect = 6e-54, Method: Composition-based stats. Identities = 41/313 (13%), Positives = 101/313 (32%), Gaps = 27/313 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +D+ L + + + +KAA+R++++ ++S ++ KL PL + L T Sbjct: 1 MDIKQLQYFIAVSEHMNFSKAAERLHISQPSLSNAIKKLEHEIGSPLLDRNTRNLQLTEA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHH-QTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + ++ +L + + + + L + + YPQ Sbjct: 61 GEVLFERAKVIVKNMEVLKKEMDEVVVHGTSEITIGVMESI-KHWLPKVIANYKKDYPQM 119 Query: 127 TIKLRN--WDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 I L + ++ + + + + ++ + L+ + L Sbjct: 120 MIHLVDILGSKRVKKSLKSYKTHLIITNQLMDDP----------ELEVKTLYEERLVAVL 169 Query: 185 RKDHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 HP +T ++ P I + N ++ G+ I + FE ++ Sbjct: 170 PLHHPLAKKETLSISDISAEPFIISTEGFQTRRDILNTFEQAGKSIDIQFEIERFETAVS 229 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 + + NL + P + + L L++ K Sbjct: 230 LVRE--NLGITILPENYLQGPTAKTIVKKE-------IEGANLCRNVYLVYLKNRHLPFA 280 Query: 304 IVWLRETIKNLYA 316 I R+ +K++ Sbjct: 281 I---RQLLKDVLQ 290 >UniRef50_UPI0001694914 Transcriptional Regulator, LysR family protein n=1 Tax=Paenibacillus larvae subsp. larvae BRL-230010 RepID=UPI0001694914 Length = 299 Score = 213 bits (544), Expect = 7e-54, Method: Composition-based stats. Identities = 44/312 (14%), Positives = 99/312 (31%), Gaps = 27/312 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L + +E + +AA R+N+T +S+ + +L PL + + T Sbjct: 1 MELRHLRYFVTVAEELNFGRAAARLNITQPPLSQQIRQLEQELGFPLLFRTKQRVELTEA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQT-PRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + + LD + ++A ++ L + R+P Sbjct: 61 GKVFLEEARITLAHIDKTLDSARRAHLGAAGRLDIAFVGSATYRIVP-LLQSYRMRFPSV 119 Query: 127 TIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 ++ L + L A+ ++ +G + V++ + V L Sbjct: 120 SLVLHQMKTANQLQALHESQIHLGIIRSPVQSPL----------LASTVIYRERFLVALP 169 Query: 186 KDHPALHQ-TWNLDTFLRYPHISICW--EQSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 HP + + I A+ + + G IA+ PE + Sbjct: 170 HTHPLTRENQLRIQDLEHQDFILPSRSNGSMYHEAVIRLCFQSGFYPKIALEAPEILTIV 229 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 + + +A P + + +V L + ++W K N + Sbjct: 230 AFVSA--GMGIALVPAS---FQNQQNIGVVYRELE-----NVGTMLDMVMVWRK-NEKSQ 278 Query: 303 KIVWLRETIKNL 314 + + I +L Sbjct: 279 VLKQFLQHIDSL 290 >UniRef50_C5CZA2 Transcriptional regulator, LysR family n=1 Tax=Variovorax paradoxus S110 RepID=C5CZA2_VARPS Length = 317 Score = 213 bits (543), Expect = 7e-54, Method: Composition-based stats. Identities = 71/321 (22%), Positives = 119/321 (37%), Gaps = 23/321 (7%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 +I ++DLNL L Q + RSVT A R+ +T SAVS +L ++R F+D LFV S G+ Sbjct: 1 MNINSIDLNLFLVFQAIYATRSVTLAGDRLGMTQSAVSNALKRMRERFNDALFVRSADGM 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQIY 120 PTP+ + + E + +D+ P F +A ++M+ L Sbjct: 61 VPTPVAERLIAPIEEGIACLVQAVDQGRTFEPETSSRIFRIAVNDIGQLVMVPELISVAR 120 Query: 121 QRYPQATIKLRNWD-YDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 P + + ++ + G++D+ ++ + + LF + Sbjct: 121 GIAPGVRFETVDVSVAEARQRMLHGQIDVALGS----------WEAMGPSFYQQRLFDET 170 Query: 180 PCVWLRKDHPA-LHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGR--ERTIAMSLP 236 V + K P + LD +L HI+ + + L L+ G R + ++ Sbjct: 171 FVVLMSKASPLGTRERIELDDYLAAEHIAYRPQGTTDSQLQQTLERAGALDRRRVVLTAA 230 Query: 237 EFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHK 296 + A LL A A L V P WH+ Sbjct: 231 HSLGLTSIVATSGLLLTAPARLAKAMVASRADLHSVDAPFEVR-------PFEIRQQWHE 283 Query: 297 RNSHNPKIVWLRETIKNLYAS 317 R + WLRE I L+ Sbjct: 284 RFHQDSGNRWLRELIFGLFHE 304 >UniRef50_A7JRS0 Possible LysR family transcriptional regulator n=3 Tax=Mannheimia haemolytica RepID=A7JRS0_PASHA Length = 302 Score = 213 bits (543), Expect = 7e-54, Method: Composition-based stats. Identities = 66/316 (20%), Positives = 127/316 (40%), Gaps = 24/316 (7%) Query: 4 SITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLS 63 I TLD NLL +L+ E +V++AA+R+++T A+S L +LR F+DPLFV G+ Sbjct: 3 DIRTLDFNLLKAFVVLLDECNVSRAAQRLSITQPAMSGILNRLRESFNDPLFVRVQHGMQ 62 Query: 64 PTPLMVSMEQNLAEWMQMSNLLLD-KPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQR 122 PT + + Q +Q + +L + +AA + I+ L ++ + Sbjct: 63 PTDRALQLGQTARNILQDISSMLQPPILEPEHLNMTLRIAAMDYVQQIIALPLILRLRRL 122 Query: 123 YPQATIKLRNWDYDSLDAI-TRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPC 181 P + L ++ + + ++D+ R+ VL+ + Sbjct: 123 APNVKVALLPVQGQNIKTLFEQKKIDLALVSRQHLSTDTLK----------TVLYEERYV 172 Query: 182 VWLRKDHPALHQTWNLDTFLRYPHISICW-EQSDTWALDNVLQELGRERTIAMSLPEFEQ 240 + K HP +LD F P + + + A D LQ++G +R + +S+ Sbjct: 173 CAMSKTHPMAQTPLSLDQFCNLPFAMLSYNGGEFSGATDLALQKIGLQRKVMVSVNHISL 232 Query: 241 SLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 + D + + R + ++ L P+ + + WH+R Sbjct: 233 LPQLLQGSDLVAV-LPERLAKTLPNVY---LQPPPIEVE-------GFTMMMAWHERTEQ 281 Query: 301 NPKIVWLRETIKNLYA 316 + WLRE ++ + Sbjct: 282 DTAHRWLREVLQGVVK 297 >UniRef50_Q2RHB2 Transcriptional regulator, LysR family n=1 Tax=Moorella thermoacetica ATCC 39073 RepID=Q2RHB2_MOOTA Length = 297 Score = 213 bits (543), Expect = 8e-54, Method: Composition-based stats. Identities = 42/297 (14%), Positives = 97/297 (32%), Gaps = 24/297 (8%) Query: 11 NLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVS 70 N LL + + +++S ++AA+ +++T A+S + L +F L + ++ T Sbjct: 4 NQLLTFKAVAEQKSFSRAARVLHLTQPAISLHIQSLEEYFGTRLLDRNNRQVTLTEAGRV 63 Query: 71 MEQNLAEWMQMSNLLLDKPHHQTP-RGLKFELAAESPLMMIMLNALSKQIYQRYPQATIK 129 + E ++ + + + + A + L +++ + ++YP I Sbjct: 64 LYNYALELSRLYDEVKKALADISGKVKGNLVVGATLTIGEYFLPSIAGEFKRQYPDVEIT 123 Query: 130 LR-NWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDH 188 LR + + GE+D+ + + + E LF D + + +H Sbjct: 124 LRIANTQEIICRTLDGELDLALIEGQ----------AKHPNLIQEDLFQDELVLIIHPEH 173 Query: 189 PALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGR---ERTIAMSLPEFEQSLFM 244 + + P I + L++ G + M L + Sbjct: 174 RWAGRREITPEELREEPLILREEGSGTRQITEAGLRKAGLELSTLKVVMELGSTQAIKEA 233 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 L +A R + L L Q F + +++ + Sbjct: 234 VEA--GLGVAIISRLAIKKEIRYNL------LREVRLQGIDFRRTFHIAYNRHKFRS 282 >UniRef50_Q1AVR3 Transcriptional regulator, LysR family n=1 Tax=Rubrobacter xylanophilus DSM 9941 RepID=Q1AVR3_RUBXD Length = 305 Score = 213 bits (543), Expect = 8e-54, Method: Composition-based stats. Identities = 48/317 (15%), Positives = 102/317 (32%), Gaps = 26/317 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L + +E+S AA+R+ ++ +S + L LF + + T Sbjct: 1 MELRQLRYFVAVAEEQSFGGAARRLRISQPPLSLQIKALERELGVRLFDRNTRRVMLTDS 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQ-TPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + ++ + K E+ S + +L + +R+ Sbjct: 61 GRAFLERARVILEEVERAKETAKGAERGLLGKLEVGFVSSATLSLLPPAIRLFRERFGGV 120 Query: 127 TIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 ++LR +DA+ GE +G I E +F + V L Sbjct: 121 ELELRELTSAQQIDALYNGETRVGLVRLPLRAP----------GIHLEPVFEERLVVALP 170 Query: 186 KDHPA-LHQTWNLDTFLRYPHISICWE--QSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 HP +L+ P I + + + Q +G +A + + Sbjct: 171 SGHPLEALDRVSLEAIADLPLIFFTRQLIPGLHAQIIELFQRVGAFPNVAQHAVHLQTIV 230 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 + A + ++ P + +V LPL D++ L W + + Sbjct: 231 GLVAS--GVGISILPSSAMRVRREG---IVYLPLDEDDATSW-----LGLAWVEG-DDSV 279 Query: 303 KIVWLRETIKNLYASMA 319 + ++ + S A Sbjct: 280 LVENFVSIVREVAQSEA 296 >UniRef50_B8IJK2 Transcriptional regulator, LysR family n=1 Tax=Methylobacterium nodulans ORS 2060 RepID=B8IJK2_METNO Length = 306 Score = 213 bits (543), Expect = 8e-54, Method: Composition-based stats. Identities = 50/315 (15%), Positives = 97/315 (30%), Gaps = 30/315 (9%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +DL L +L ++R +AA+ +N+ +S+ + L + LF S + T Sbjct: 1 MDLRHLRYFVVLAEQRHFGRAAELLNMAQPPLSQQIKALEDELEVTLFDRSTRPIELTAA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNALSKQIYQRYPQA 126 ++ + + + + + M L + R+P Sbjct: 61 GRTLLREARQILHHVSRAQAATRRAGQGQDGHLVIGVTGSAAMEFLPPVLLAFRARWPDI 120 Query: 127 TIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + LR + + A+ RGE+ IGF L ++ ++ D V L Sbjct: 121 RLSLREMSSPEQIAALERGEIHIGFVRPPV----------LDDRLNVRLVHQDPFVVALP 170 Query: 186 KDHPALH-QTWNLDTFLRYPHISICW--EQSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 DHP + L I + +V + G S P+ L Sbjct: 171 GDHPQAGVEGVRLADLNGTALIIFDPAEAPGFRDLIIHVCRTAGYVPETLESAPQMTTML 230 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 + + L A PR + + F V +W + + Sbjct: 231 ALVSA--GLGFALVPRSARRLALER--------VVFRPLLDPCAAVELYAVWSR----DK 276 Query: 303 KIVWLRETIKNLYAS 317 + L E + ++ Sbjct: 277 AVR-LAEELVSVIDE 290 >UniRef50_Q1IRM1 Transcriptional regulator, LysR family n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1IRM1_ACIBL Length = 302 Score = 213 bits (543), Expect = 8e-54, Method: Composition-based stats. Identities = 45/308 (14%), Positives = 102/308 (33%), Gaps = 22/308 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +D + LL + + + ++A +++ + SAVS + +L + + LF S + +P Sbjct: 1 MDFDQLLTFLEVAKLGNFSRAGEKVYRSQSAVSAQIRQLEQEYGERLFDRSGKIVRLSPA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + + + N L Q + A + +L + + Q++PQ Sbjct: 61 GEVLLEYAQRMVALRNESLRAVADQGETPRGVLSIGANEATCLYVLPDIFTEYCQQFPQV 120 Query: 127 TIKL-RNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 I + RN+ L A+ G +D+G + S + +F D + + Sbjct: 121 QITVYRNFSRKILQAVEDGVIDLGIATLPVKSPS----------LKVHPIFRDRLELMVP 170 Query: 186 KDHPA-LHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 HP ++ ++ YP I LD + + + +AM +P Sbjct: 171 VRHPLAAKESVTIEEIAEYPQIFPKTGY-TRQQLDKLFRPYNSKLRVAMEIPSVGLIKSF 229 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 + + LP+ + L++ + Sbjct: 230 VVS--GVGVTLLSSTFAQDEVRAG-KAKMLPIA-----GVDMWRELGLIYRNDRTLPRSA 281 Query: 305 VWLRETIK 312 + ++ Sbjct: 282 TAFIDLMR 289 >UniRef50_A7K354 LysR substrate binding domain protein n=17 Tax=Gammaproteobacteria RepID=A7K354_VIBSE Length = 314 Score = 213 bits (543), Expect = 8e-54, Method: Composition-based stats. Identities = 67/317 (21%), Positives = 115/317 (36%), Gaps = 21/317 (6%) Query: 4 SITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLS 63 +DLNLL+ L + RSV+ AA++ V+ SA+S SL++LR FDDPLF + Sbjct: 14 QWRNIDLNLLVTFSYLYRYRSVSVAAEKSYVSQSAMSHSLSRLRLLFDDPLFERKGHKME 73 Query: 64 PTPLMVSMEQNLAEWMQMS--NLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQ 121 PT + + + +LL + I L +I Q Sbjct: 74 PTEHAHHIAPTVHHLLDSIAKDLLTKSAFQPENYAGICRIGLTDYAEFIFAPRLYDEIRQ 133 Query: 122 RYPQATIKLRNWDYDSLDAITRGE-VDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 R P+A I N + + A+T E +D+ L + L+++ Sbjct: 134 RAPEAQISFINVNRSNYVALTEHEKLDVIIGSMPV----------LDDNFESLYLYTEKH 183 Query: 181 CVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQ 240 K +L+ F + + S +D L E G R + ++ F Sbjct: 184 VCMCDKQVLKGETQLSLEAFANIEQALVSPDGSLKTQVDQKLAEHGLSRKVTVASRNFLT 243 Query: 241 SLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 + + D + + + L V P+ + +LWH ++ Sbjct: 244 IRHLLKKRDLIAI-VPEKMALAEGFSDDLITVNPPIAV-------ADFDIAMLWHSSRNN 295 Query: 301 NPKIVWLRETIKNLYAS 317 K +WLRE + + S Sbjct: 296 EDKGIWLRELVSSTITS 312 >UniRef50_A0L4T1 Transcriptional regulator, LysR family n=2 Tax=Proteobacteria RepID=A0L4T1_MAGSM Length = 307 Score = 213 bits (543), Expect = 9e-54, Method: Composition-based stats. Identities = 41/312 (13%), Positives = 90/312 (28%), Gaps = 24/312 (7%) Query: 13 LLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSME 72 L + + S T+AA+ + +T AV+ + +L FD LF +S T + + Sbjct: 8 LRVFYAVAKHLSFTRAAEELYLTQPAVTFQIRQLEEHFDTRLFDRHHNRISLTEAGLEVY 67 Query: 73 QNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNALSKQIYQRYPQATIKL- 130 + + T ++ A + + +L + ++ I+L Sbjct: 68 SYAERILDLYRETEKAVSELTGVTRGVVKVGASTTIGEYLLPRILSDYRDQFNDVQIRLS 127 Query: 131 RNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPA 190 + + + +D+G ++ L D V L +HP Sbjct: 128 IDNTRTVVRKLEDATIDVGMIEGPVKNKNIARDGCLD----------DELVVILPPNHPL 177 Query: 191 LH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGR---ERTIAMSLPEFEQSLFMAA 246 + YP +S + + L G + I + L E Sbjct: 178 CDLDEIPVKELKAYPFVSREEGSGTRQVVHDHLLHAGLPYDQLDIVLELGSTEAVKGSVE 237 Query: 247 QPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVW 306 + + ++ + L Q ++ + K+ + + Sbjct: 238 GGIGIGIVSSASLIKELKLGI--------LVAKRVQGMRITRTINFIHQKQKFRSKAVEA 289 Query: 307 LRETIKNLYASM 318 K+ M Sbjct: 290 FINFAKDHCKHM 301 >UniRef50_Q687Z9 LysR-type activator n=1 Tax=Sphingopyxis macrogoltabida RepID=Q687Z9_9SPHN Length = 318 Score = 213 bits (543), Expect = 9e-54, Method: Composition-based stats. Identities = 63/307 (20%), Positives = 122/307 (39%), Gaps = 22/307 (7%) Query: 14 LCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSMEQ 73 +M +R V+ AA+ + +T VS +L +LR DD LF +P G+ PT + + + Sbjct: 26 RIFHRMMVDRKVSAAAEALGITQPGVSNALKRLRDITDDELFTRAPGGMEPTAFAIQIAE 85 Query: 74 NLAEWMQMSNLLLDKPHHQTPR--GLKFELAAESPLMMIMLNALSKQIYQRYPQATI-KL 130 ++ + M + +P P F L +L + + + P + + Sbjct: 86 PISYALAMVDAAFTQPTDFKPASDRRLFRLGLTDIGEAYLLPKILARTAEIAPHVSFTTI 145 Query: 131 RNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPA 190 R + + + G +D+ ++ ++ + L + + +RKDHP Sbjct: 146 RPPKSEIREEMEVGSLDLAI----------DVFPNMKGNFVHRRLLKEKHVICMRKDHPL 195 Query: 191 L-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQPD 249 W + ++ H+ + + + +D +L G R I + LP F + + Sbjct: 196 ANKAEWTMADYIAQEHVVVIAQGTGHGDIDALLARKGISRNIRLMLPHFLSLGPVMHATN 255 Query: 250 NLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWLRE 309 L+AT P + L++LP P V + WH+R +P VWLR Sbjct: 256 --LVATLPEDAALLLE-EPYELISLPFP-----GILPIVHVDVFWHRRLHRDPANVWLRN 307 Query: 310 TIKNLYA 316 + L++ Sbjct: 308 LVYELFS 314 >UniRef50_A0R3Z8 Transcriptional regulator, LysR family protein n=1 Tax=Mycobacterium smegmatis str. MC2 155 RepID=A0R3Z8_MYCS2 Length = 289 Score = 213 bits (543), Expect = 9e-54, Method: Composition-based stats. Identities = 39/310 (12%), Positives = 98/310 (31%), Gaps = 26/310 (8%) Query: 10 LNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMV 69 + L C +L +E +AA+R++V A+S+ + ++ LF+ + +S T Sbjct: 1 MRHLRCFVVLAEELHFGRAAQRLHVAQPALSQLIQRVERELGAQLFLRTRRTVSLTEAGQ 60 Query: 70 SMEQNLAEWMQMSNLLLDKPHHQ-TPRGLKFELAAESPLMMIMLNALSKQIYQRYPQATI 128 ++ ++ ++ + + +L L + +P +I Sbjct: 61 TLLPEARRILRDADRVTQAVRAVHRGETGSVTIGFVGSAADDVLPRLVAAHRRHHPGVSI 120 Query: 129 KLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKD 187 +L L+ + + +G + + VL + + + Sbjct: 121 RLEEGTTAQQLEWLRDQRITVGLGRTPIDDPA----------VSTVVLARESLVLAVPDS 170 Query: 188 HPALH-QTWNLDTFLRYPHISICW--EQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 H ++ L P I + + G ++ + + + Sbjct: 171 HALSGAESAELAGLAEEPFIMFPRHLGPGLYDIIHSACAAAGFTPSVVYETVRMQTIVGL 230 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 L +A P + + + V L + +++W +P + Sbjct: 231 V--SGGLGVALVPESVRNLGRK-GVRYVHL-------ADAPPAIELSMMWRNDCE-SPHL 279 Query: 305 VWLRETIKNL 314 LR+T ++L Sbjct: 280 QPLRKTARHL 289 >UniRef50_D0FZR1 LysR-type transcriptional regulator n=2 Tax=Rhodococcus RepID=D0FZR1_9NOCA Length = 311 Score = 213 bits (543), Expect = 9e-54, Method: Composition-based stats. Identities = 77/321 (23%), Positives = 129/321 (40%), Gaps = 23/321 (7%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 K + ++DLNLL+ L L+ RSVT+AA+R+N++ SA+S SL++LR FDDPL V + L Sbjct: 2 KDLRSVDLNLLVDLDALLSMRSVTEAARRLNLSQSAMSGSLSRLRRLFDDPLMVRNGRVL 61 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPR--GLKFELAAESPLMMIMLNALSKQIY 120 TP ++ + E + + + + PR F ++A ++L L + + Sbjct: 62 VLTPRAEALIPPVKEILHQIDGVFAESDDFDPRTTTRSFSISASDYATAVVLAPLLRGLA 121 Query: 121 QRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 P T+ + D + D+ + LFSD Sbjct: 122 DDAPNVTVNVLPRSPDVPAVLRLDSADLVI---------EPREMMGDSPLPGVSLFSDRW 172 Query: 181 CVWL--RKDHPALHQTWNLDTFLRYPHISICWEQSDT-WALDNVLQELGRERTIAMSLPE 237 L PA+ D +L+ PH+ Q D L LG R I +++ Sbjct: 173 VCMLDGSMHEPAVLARLERDHYLQLPHLVYSIGQDRQLNYADRHLASLGVRRRIELTVES 232 Query: 238 FEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKR 297 F + + L++ L L LV P+P + W+ R Sbjct: 233 FLMAPLLIRGTS--LVSLVLERAASMLPLDGLRLVDPPIPVPGITD-------AMYWNPR 283 Query: 298 NSHNPKIVWLRETIKNLYASM 318 +S +P WLR+ + + A + Sbjct: 284 HSEDPGHRWLRQRLADTAARL 304 >UniRef50_C1M4D9 Putative uncharacterized protein n=2 Tax=Citrobacter RepID=C1M4D9_9ENTR Length = 302 Score = 213 bits (543), Expect = 9e-54, Method: Composition-based stats. Identities = 42/318 (13%), Positives = 106/318 (33%), Gaps = 26/318 (8%) Query: 7 TLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTP 66 ++L L + +E +AA R+N++ +S+ + L L + ++ T Sbjct: 2 NIELRHLRYFVAVAEELHFGRAAARLNISQPPLSQQIQILEQQVGARLLARTNRSVALTS 61 Query: 67 LMVSMEQNLAEWMQMSNLLLDKPHHQT-PRGLKFELAAESPLMMI-MLNALSKQIYQRYP 124 + + + + N + + + S I ++ Q YP Sbjct: 62 AGKQFLADSRQILGLVNEAAARAERLHLGEAGELRIGFTSSAPFIKAVSDTLSLFRQSYP 121 Query: 125 QATIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVW 183 ++ R + + + G +D+G + LP ++ E++ + Sbjct: 122 AVHMQTREMNTREQIAPLNEGTLDLGLLRN----------TQLPETLEREIILHEPLMAM 171 Query: 184 LRKDHPALHQT-WNLDTFLRYPHISICW--EQSDTWALDNVLQELGRERTIAMSLPEFEQ 240 + + HP + L P + + +++ G + TIA + E Sbjct: 172 IPRAHPLAQKPVVTLAELANEPFVFFDPHVGTGLYDDILGLMRRYGLKPTIAQEVGEAMT 231 Query: 241 SLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 + + A L ++ P + ++ + +P+ ++ L+W K + Sbjct: 232 IIGLVAA--GLGVSILP---ASFKRVQLYEMCWIPIA-----EEDAVSEMWLVWPKHHEQ 281 Query: 301 NPKIVWLRETIKNLYASM 318 + RE + ++ Sbjct: 282 SHAAQRFREQLLAAVQAI 299 >UniRef50_C8T378 LysR family transcriptional regulator n=1 Tax=Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884 RepID=C8T378_KLEPR Length = 321 Score = 213 bits (543), Expect = 9e-54, Method: Composition-based stats. Identities = 56/310 (18%), Positives = 103/310 (33%), Gaps = 22/310 (7%) Query: 7 TLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTP 66 D N L + LM+ S AA+ I ++ SA+S+ + KL + LF + ++ T Sbjct: 26 NFDFNDLYAFRALMEYGSFRLAAESICLSQSALSRRIEKLETALGNRLFDRTTRRVTLTL 85 Query: 67 LMVSMEQNLAEWMQMSNLLLDKPHHQT-PRGLKFELAAESPLMMIMLNALSKQIYQRYPQ 125 + + + + +L + R +A + + + RYPQ Sbjct: 86 YGQNFAERSEQLLAHVETVLADISQVSKARTGLVTVATVPSAAYYFMPEIIRSFQARYPQ 145 Query: 126 ATIKLRNWD-YDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 I+L + + ++A++ G+ D G +LP +I++ L D Sbjct: 146 VRIRLIDSSVGNVIEAVSSGQADFGLCF----------AKNLPASIEFTPLADDRYVAAC 195 Query: 185 RKDHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 R DHP +T + + +I + + LD L L R L Sbjct: 196 RHDHPLARKTHLSWQAYFEQDYIGLDRVSGNRTLLDRELAHLTPARPSICETRHVTTMLG 255 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 M + +A P + L V L + L+ + Sbjct: 256 MVEA--GIGIAAVPAMSMPAGEHSVLRAVPL-------TDPVVTRTVGLIRLSGRIQSYV 306 Query: 304 IVWLRETIKN 313 L + I Sbjct: 307 AAELEKLIIE 316 >UniRef50_Q87I72 Putative transcriptional regulator, LysR family n=7 Tax=Vibrio parahaemolyticus RepID=Q87I72_VIBPA Length = 332 Score = 212 bits (542), Expect = 9e-54, Method: Composition-based stats. Identities = 71/321 (22%), Positives = 135/321 (42%), Gaps = 17/321 (5%) Query: 2 KKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLG 61 KK + LDLNLL +++ +E+ AAKR+N+T AVS+++A+LR F+DPLFV + G Sbjct: 22 KKPLHNLDLNLLKIFRVVSEEKKTVAAAKRLNITQPAVSRAMARLREHFNDPLFVRTRYG 81 Query: 62 LSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTP--RGLKFELAAESPLMMIMLNALSKQI 119 L PT + +L + M + L+ + +P ++A + L ++ Sbjct: 82 LKPTDKGQLLSDSLPKIMDDLSNLILELDEFSPESSSANIKIAINGFFGVSFPAKLHLKL 141 Query: 120 YQRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 P TI+ +W +++ + GE+D+G + L+++P + + L +D Sbjct: 142 LDIAPNITIETESWSSNTISKLINGELDLGINYP---------LNNVPKELQTKHLATDE 192 Query: 180 PCVWLRKDHPALHQTWNLDTFLRYPHIS--ICWEQSDTWALDNVLQELGRERTIAMSLPE 237 + R HP Q + + YP ++ + + ++ + E A Sbjct: 193 FQILARDAHPLSDQAIDCNDLSLYPIVTAIVPDWNENRTLIECWAERENIETETAFRSSS 252 Query: 238 FEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKR 297 L + ++ D L P + P ++ K L H R Sbjct: 253 ILSLLEVISETDALF----PTSAFLSRKHLSGLKSLSLSPQLKASFKGESQDIYLYMHYR 308 Query: 298 NSHNPKIVWLRETIKNLYASM 318 + ++P WL I++ +S+ Sbjct: 309 HRNSPIYKWLIPIIESTLSSI 329 >UniRef50_B7V4S2 Probable transcriptional regulator n=7 Tax=Pseudomonas aeruginosa RepID=B7V4S2_PSEA8 Length = 304 Score = 212 bits (542), Expect = 9e-54, Method: Composition-based stats. Identities = 69/318 (21%), Positives = 123/318 (38%), Gaps = 20/318 (6%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 + +DLNLL+ L L+ ER V++AA+R+ ++ AVS +L +LR F DPL V + Sbjct: 5 HDLRRIDLNLLVVLDALLSERHVSRAAQRLAMSQPAVSHALGRLRELFGDPLLVRVKSRM 64 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLL-DKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQ 121 T L + + L + ++ F L ++L AL +Q Sbjct: 65 QLTSLALELAPKLQASLDQVRGVIGGPTFEPVRSRRHFRLGMSDYGAWVVLPALLRQQQA 124 Query: 122 RYPQATIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 P + + ++ + G++D + LP + LF + Sbjct: 125 LAPGVSFGIVQEPRLETARQVAEGQLDCALG----------VFPLLPEGVRARRLFEERF 174 Query: 181 CVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQ 240 R+ +LD +L H+ + + + +D+ L++ G R +A++LP F Sbjct: 175 VCVCRRSLFDRPDGLSLDRYLAARHVRVSLQDNPAEEVDSALEKRGLRRQVALTLPHFTV 234 Query: 241 SLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 + + A D L+L A R + +L L PL + +W Sbjct: 235 APALLAGTD-LVLTIAERTLERLRLPEELALCEPPLAIP-------RFDYVQIWRGDAER 286 Query: 301 NPKIVWLRETIKNLYASM 318 WLRE I+ + Sbjct: 287 EAAGAWLREQIQAAARKI 304 >UniRef50_Q2RHG4 Transcriptional regulator, LysR family n=1 Tax=Moorella thermoacetica ATCC 39073 RepID=Q2RHG4_MOOTA Length = 302 Score = 212 bits (542), Expect = 1e-53, Method: Composition-based stats. Identities = 45/312 (14%), Positives = 92/312 (29%), Gaps = 24/312 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +++N L+ +++ +++ AA+ +++T AVSK L L +F L + T Sbjct: 1 MNINHLITFITTVEKGTLSAAAEELHLTQPAVSKQLQALEDYFGLRLLERRGREVRLTAA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 ++ N + T + L A + +L L + YP+ Sbjct: 61 GEICYRHARIIASHLNQTRRELAELTQLVRGRLLLGASTTPGQYILPRLIGAFRREYPRV 120 Query: 127 TIKL-RNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + L + + + GE+D+ + Y L D + + Sbjct: 121 EVILTIADTQEVVQRLQEGEIDL---------GVVGAAGGRGKNLSYSRLAGDELVLIVP 171 Query: 186 KDHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRER---TIAMSLPEFEQS 241 H T + P + ++ L G I M L E Sbjct: 172 PGHRLAGATAISPGELKEEPLVWRESGSGTRRVVEERLAAAGFTVDPEQIVMELGSTEAI 231 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 + L ++ + + L Q L+ L+ +R + Sbjct: 232 VSAVEA--GLGISLVTSWAVEKSVKLG------RLAVVTLQGVDLKRDLYLV-RRRQPLS 282 Query: 302 PKIVWLRETIKN 313 P + Sbjct: 283 PAAEAFVNFAAD 294 >UniRef50_A9C385 Transcriptional regulator, LysR family n=2 Tax=cellular organisms RepID=A9C385_DELAS Length = 332 Score = 212 bits (542), Expect = 1e-53, Method: Composition-based stats. Identities = 82/316 (25%), Positives = 139/316 (43%), Gaps = 21/316 (6%) Query: 4 SITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLS 63 ++ ++DLNLL+ + L++ERSV KAA R+ +T SAVS +L +LR F+DPL + + G+S Sbjct: 16 NLRSIDLNLLVIFEALVEERSVGKAAARLGITSSAVSHALRRLRTQFNDPLLLRTAEGMS 75 Query: 64 PTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQIYQ 121 PTP V + ++ + ++ P F L + +++L L + Sbjct: 76 PTPEAVRLARSFRKAFSEIESAIEVSKGFDPATARRNFHLRLSDYVGVLLLPQLCIHLRA 135 Query: 122 RYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPC 181 P ++ ++++D E G R S R R +LS+ L D Sbjct: 136 VAPGISLSVQSFDGRQPSDRVEYE---GVEIRLSVSRGRSVLSA------SRRLLDDQWM 186 Query: 182 VWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQS 241 V +RKDHPA L+ +L H+ + + +D +L E G R + +P + Sbjct: 187 VLMRKDHPAAASPLTLEKYLEQGHLKVT--GVGSSIVDELLAERGLARRVMFQVPTWLGM 244 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 + + D + A ++ L VA P+P E + +WH RN H+ Sbjct: 245 VPVIESTDLVAAMPAHWM---HSVLSGSNCVARPMPLPELA-----LSIDAVWHPRNDHD 296 Query: 302 PKIVWLRETIKNLYAS 317 W RE I ++ Sbjct: 297 AGHKWFRELIHQIFQE 312 >UniRef50_D1P5Q9 Transcriptional regulator, LysR family n=1 Tax=Providencia rustigianii DSM 4541 RepID=D1P5Q9_9ENTR Length = 305 Score = 212 bits (542), Expect = 1e-53, Method: Composition-based stats. Identities = 68/319 (21%), Positives = 140/319 (43%), Gaps = 22/319 (6%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 ++ LDLN L+ L +L++ER V++AA+ + + AVS +L +LR F DPL V Sbjct: 2 NNLRKLDLNQLVTLSVLLRERHVSRAAEALYKSQPAVSHALNQLRELFQDPLLVRRDGQY 61 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDK-PHHQTPRGLKFELAAESPLMMIMLNALSKQIYQ 121 T S+ L E + + L+ + + F +A ++ L + + Sbjct: 62 QLTSKAESLCIPLNEALNQLDDLIAQKQFNPLSCQRHFNIAMSDYGAALIAVKLVPYLRK 121 Query: 122 RYPQATIKLRNWDYDSLD-AITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 P +K+ + + + + G +D+ F + ++L ++ +++F+D Sbjct: 122 YAPDIDLKIWHCSREEMQNKLHEGSLDLAFG----------VFNTLDYSLRNQIVFTDKF 171 Query: 181 CVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQ 240 + +L ++ YPHI + + D +D+ LQ + ++R IA+++P ++ Sbjct: 172 VSIVDPQ-VCSQGKMDLIDWVSYPHILVSMKPFDANEIDHQLQLINQQRRIAVTVPYWQI 230 Query: 241 SLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 + + + L+ T + + + L PLP + + ++WH+R+ Sbjct: 231 APQLLMGTN--LILTLAQKAIPLSMSDKFTLFTPPLPLPDLVFQ-------MIWHQRSDT 281 Query: 301 NPKIVWLRETIKNLYASMA 319 + + WLRETI L Sbjct: 282 DKAVYWLRETIVELLNEEG 300 >UniRef50_P96725 Uncharacterized HTH-type transcriptional regulator ywqM n=3 Tax=Bacillus RepID=YWQM_BACSU Length = 293 Score = 212 bits (542), Expect = 1e-53, Method: Composition-based stats. Identities = 46/312 (14%), Positives = 94/312 (30%), Gaps = 22/312 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L+ + + T AK +N S+V+ + L PLF L T Sbjct: 1 MELKQLITFITAAEHVNFTLTAKMLNYAQSSVTSQIKSLEEEIGTPLFERLGKRLILTEA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQAT 127 + + + + ++ + ++ A L + K+ Q +PQ Sbjct: 61 GKTFKSYAQKIIALTEEAKMATNQVRETTGTLKIGATESQCTYRLPPIIKEFKQAFPQVK 120 Query: 128 IKLRN--WDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + + + + + + +G++DI F ++ + A+ E L D + Sbjct: 121 LIFKPYISNEQAKEQLLQGQLDITFILD---------VNRMEDALHVESLIQDEIKMVAA 171 Query: 186 KDHPALHQ-TWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 DHP L + S +N L + G + E Sbjct: 172 NDHPFPADLPVTLKDLQNETLLLTEDGCSYRTLFENNLHDSGIYPN-KLEFVSIEAIKQC 230 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 L + P + + L + Q V L WHK + + Sbjct: 231 VMA--GLGIGILPEMTVKDDIAAG-RMKEL------NWQSDCPVFTQLAWHKDKWMSAPL 281 Query: 305 VWLRETIKNLYA 316 + + + Sbjct: 282 KAFIDLTRKTFK 293 >UniRef50_B5GYU9 LysR-family transcriptional regulator (Fragment) n=11 Tax=Streptomyces RepID=B5GYU9_STRCL Length = 340 Score = 212 bits (542), Expect = 1e-53, Method: Composition-based stats. Identities = 39/289 (13%), Positives = 89/289 (30%), Gaps = 11/289 (3%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++ L L+ + S + AA+ + T AVS+ + L PL + + + T Sbjct: 2 IEARHLRVLRAVATTGSFSAAARALGCTQPAVSQQMKALETSAGTPLLIRTGREMRLTQA 61 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + ++ + + ++ + L + ++ + + +P Sbjct: 62 GEVLVRHASGILAGLTAAEEEVAAIAGLRAGRVRLVSFPSGSSTLVPSALAALRAAHPGT 121 Query: 127 TIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + L S++ + G+ D+ + R + + L SD + Sbjct: 122 RVSLVEAEPPRSVEMLREGDCDVALAFRYAGAEREAEWG----DLVVRPLLSDRLVGLVP 177 Query: 186 KDHPALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 + H T +D P I+ C L V + G I + ++ + + Sbjct: 178 EGHRLAGADTVTIDDLADEPWIAGCPRC--RRQLVEVCESAGFAPRIDFATDDYPTVIGL 235 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLL 293 L +A P + VA+ P + + Sbjct: 236 V--GAGLGVAVLPGLALESVRPKGARAVAVEPPVVRKIVALTLPDLSQV 282 >UniRef50_C0Z4V5 Transcriptional regulator n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0Z4V5_BREBN Length = 298 Score = 212 bits (542), Expect = 1e-53, Method: Composition-based stats. Identities = 40/312 (12%), Positives = 106/312 (33%), Gaps = 22/312 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +D+ L +++ ++ TKAA+ ++V+ ++SK + L + L + + T Sbjct: 1 MDIRQLQYFVEVVKHKNFTKAAQSLHVSQPSISKMIKALEEELEVVLLDRTERKMDLTDA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTP-RGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + +Q+ + + +L + +L + ++YP Sbjct: 61 GEMVYSYATKVLQLMEGMASSIAELRNVERGRVKLGMMPTVGSFLLPNVIALFKKQYPGI 120 Query: 127 TIKLRNWDYDSLD-AITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 I+++ + L+ + +G +D+ + + L ++ + Sbjct: 121 DIEMKEYSAKLLEIQMEQGSIDVALTVLPMDQEK----------FEAVPLLAEDLVAIVH 170 Query: 186 KDHPALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 ++H +L+ I E + + + + G E +A ++ M Sbjct: 171 REHWLAGVDEVSLEQLKDEAFILFTEEYAMHDVVRHACKLSGFEPNVAYMSSLWDFVGEM 230 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 A L ++ PR QL V ++ + L++ K + Sbjct: 231 VATQ--LGISLIPRSIVRRLNNGQLHTV-------NISYPVIDWQYALIYRKEGYLSHAT 281 Query: 305 VWLRETIKNLYA 316 ++ +Y+ Sbjct: 282 KAFISFVEKMYS 293 >UniRef50_A4SH82 Transcriptional regulator, LysR family n=2 Tax=Aeromonas RepID=A4SH82_AERS4 Length = 324 Score = 212 bits (542), Expect = 1e-53, Method: Composition-based stats. Identities = 69/318 (21%), Positives = 130/318 (40%), Gaps = 21/318 (6%) Query: 1 MKKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPL 60 M+ ++ LDLNLL +LMQER+VT+AA+R++++ S VS +L +LR DDPLFV S Sbjct: 1 MELPLSRLDLNLLTVFDMLMQERNVTRAAERLHLSQSTVSHALGRLRQALDDPLFVMSRR 60 Query: 61 GLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTP--RGLKFELAAESPLMMIMLNALSKQ 118 + PT ++ + + + M L + P F +A + ++ AL +Q Sbjct: 61 EMMPTERAKTLAGPVRQALAMLEQGLRQAEGFDPASARRIFRIATPGSVEHGLVPALVEQ 120 Query: 119 IYQRYPQATIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFS 177 ++++ P +++ D D + +GE+D+ +++ + E F+ Sbjct: 121 LHRQAPHCRLEVCELADSDYERELEKGELDLVIGFADANH--------FSPRLWREPWFN 172 Query: 178 DVPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPE 237 + + + PHI +D L G ER + + LP Sbjct: 173 NPLVCLSPLGSEL-PEVLGPAELVSRPHIHTSSWGHSQAMVDLWLARFGVERELGVRLPS 231 Query: 238 FEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKR 297 F + A L + +++ + + L L L + + + H Sbjct: 232 FMAVPPLMATGRYL-VVVPEMIGRHFCRYYPLRLHQLNPEIP--------IVYLMAGHPL 282 Query: 298 NSHNPKIVWLRETIKNLY 315 +H+ I W + + L Sbjct: 283 TAHDQAIGWFKGLLHRLA 300 >UniRef50_Q5ZSZ0 Transcriptional regulator, LysR family n=4 Tax=Legionella RepID=Q5ZSZ0_LEGPH Length = 305 Score = 212 bits (541), Expect = 1e-53, Method: Composition-based stats. Identities = 63/318 (19%), Positives = 132/318 (41%), Gaps = 24/318 (7%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVN-SPLGLS 63 + L+LNLL L L+ R +T A+K++ ++ S++S L +LR F D L V + Sbjct: 1 MDKLNLNLLRALYALLTCRHLTLASKKMGISQSSMSIYLKQLREHFHDDLLVRGQGNIMQ 60 Query: 64 PTPLMVSMEQNLAEWMQMSNLLLDKPHHQTP--RGLKFELAAESPLMMIMLNALSKQIYQ 121 TPL S+ + + + L + P F + + +++ +L K++ Q Sbjct: 61 LTPLANSLIGKARQALSLIETLFNTIETFNPLISERSFSIGMTDLMSILLTPSLIKRLEQ 120 Query: 122 RYPQATIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 P + +++ Y ++++ G++D+ + +P + + LF D Sbjct: 121 EAPGVKLNIKHPSYLNTVEVFESGDIDLMIG----------MFERVPEGLKQQKLFQDEA 170 Query: 181 CVWLRKDHP-ALHQTWNLDTFLRYPHISIC-WEQSDTWALDNVLQELGRERTIAMSLPEF 238 + +HP ++ +YP I E D L++LG ++ +++SL + Sbjct: 171 VIVGGNNHPGIQKGKICIEELFKYPLIQFSLRETPFYNYFDRYLRQLGHDKRVSISLGQ- 229 Query: 239 EQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRN 298 + + L + + + + L L + ++P D WH+++ Sbjct: 230 GIMPLLVLTDSHYLTLSIRKVAEKLSHLIPLSIASVPFEVD-------SFNCYQYWHQKD 282 Query: 299 SHNPKIVWLRETIKNLYA 316 +P WLRE I ++ Sbjct: 283 DADPGHRWLREMILSIAK 300 >UniRef50_UPI0001744D79 transcriptional regulator, LysR family protein n=1 Tax=Verrucomicrobium spinosum DSM 4136 RepID=UPI0001744D79 Length = 300 Score = 212 bits (541), Expect = 1e-53, Method: Composition-based stats. Identities = 46/309 (14%), Positives = 99/309 (32%), Gaps = 23/309 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++ L +++++S + A K + +T +SK++ +L LF T Sbjct: 1 MESRALAVFAEVVRQKSFSAAGKILGLTQPTISKAVQQLEHDCGCLLFDRQGKKFRLTAA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + Q ++ L D+ + L S ++ +++P Sbjct: 61 GEVVYQRAQVILKEHERLRDELAGIHGLERGRLRLGLPSLGSSLLFAPHVASFRRQHPGI 120 Query: 127 TIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 I+L + + GE+++G S P D++ + + L Sbjct: 121 EIELHEQGSLHLQERVRAGEIEVGVSLGPV-----------PEEFDWQPVSDEPLVALLP 169 Query: 186 KDHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 HP +T L P + S + + ++ G A + + + Sbjct: 170 AGHPLERETSLELADLKDTPFVLFEPGFSLNAVILDACRQRGFSPVEAARSGHVDFIIAL 229 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 A L +A PR + +V L + + L L+W + +P Sbjct: 230 VAA--GLGVALLPRLIVNSREQRVCTVVPL-------RDEDLRWRLGLIWRRGGDLSPAA 280 Query: 305 VWLRETIKN 313 E ++ Sbjct: 281 RRWLEVVQE 289 >UniRef50_Q7MQI2 Transcriptional regulator n=36 Tax=Gammaproteobacteria RepID=Q7MQI2_VIBVY Length = 321 Score = 212 bits (541), Expect = 1e-53, Method: Composition-based stats. Identities = 76/313 (24%), Positives = 127/313 (40%), Gaps = 23/313 (7%) Query: 9 DLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLM 68 DLNLL+ L++L++E SV+KAA R+N++ SA+S+ L +LR DPLF L PT Sbjct: 18 DLNLLVALRVLIEESSVSKAAVRLNLSQSAMSRVLGRLRDLLGDPLFTREGQHLLPTEKA 77 Query: 69 VSMEQNLAEWMQMSNLLLDKPHHQTPR--GLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + +++ L E ++ LL P F +A M +L +IYQ P Sbjct: 78 LEIDRALGEPLESLRQLLSP-SEFDPHLCTQTFTIATTDYAMQTILPFALPRIYQEAPNV 136 Query: 127 TIKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + +D D +T D+ + EVL L Sbjct: 137 SFHFLPLQHDRLADQLTYEGADLAICRPTGPVEP----------LRSEVLGRVGVLCLLS 186 Query: 186 KDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMA 245 K HP + +L +L YPH I ++ L + +R + + E +L + Sbjct: 187 KQHPLAGKEMSLADYLYYPHAMIAISDGVKALIEQALVDQ-PQRKMVLRAYHLEAALAIV 245 Query: 246 AQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIV 305 L++ + + L + ALP F ++++WH R H+P Sbjct: 246 -DTMPLIITVPADLAYLVAERYDLVVKALPFQF-------TPFDYSMIWHPRCEHSPAQE 297 Query: 306 WLRETIKNLYASM 318 WLR ++ + + Sbjct: 298 WLRSVVREECSRL 310 >UniRef50_A1TN88 Transcriptional regulator, LysR family n=9 Tax=Burkholderiales RepID=A1TN88_ACIAC Length = 307 Score = 212 bits (541), Expect = 1e-53, Method: Composition-based stats. Identities = 38/272 (13%), Positives = 94/272 (34%), Gaps = 18/272 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L +L E +AA R+N++ +S ++ +L LF +P + TP Sbjct: 1 MELRHLRYFAVLADELHFGRAAARLNMSQPPLSVAIRQLEERVGAQLFERTPKEVRLTPA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHH-QTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 +++ + + + L + + + ++ L QR+P Sbjct: 61 GRALKASARRVLAQAEEALSEARGVAAGLAGRLRIGFVGAMLYRGLPQALGVFQQRHPGV 120 Query: 127 TIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + L+ + + + + +D+GF S +P + +L ++ L Sbjct: 121 RVSLQELNSGEQIGELLHDRLDLGFV----------HTSRMPATLQQRLLVTEPFLCCLP 170 Query: 186 KDHPALHQT-WNLDTFLRYPHISICW--EQSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 H + +L P + + ++ G + I + + + Sbjct: 171 AGHRLARRKVIDLRDLAGEPFVLFARAVSPDYHARILSICASAGFQPEIGHEVRHWLAVV 230 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVAL 274 + +Q L +A P+ +++L + Sbjct: 231 SLVSQ--GLGVALVPQ-AMEHSRLPGAVFRPV 259 >UniRef50_A5D2L1 Transcriptional regulator n=1 Tax=Pelotomaculum thermopropionicum SI RepID=A5D2L1_PELTS Length = 303 Score = 212 bits (541), Expect = 1e-53, Method: Composition-based stats. Identities = 43/312 (13%), Positives = 89/312 (28%), Gaps = 24/312 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L L+ + +S TKAA+++ ++ AVS + L LF + T Sbjct: 1 MNLKQLEAFLLVAELQSFTKAARQLYMSQPAVSFQIKALEEDLQVALFQRGDKKVILTEA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + ++ + + A + +L L + ++YP Sbjct: 61 GRLLYPEAKQMLKHYQKIKVGLDDLRDLKKGHLVVGASTIPGEYLLPLLIGKFKEKYPGI 120 Query: 127 TIKL-RNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 I L + + E+D+G +G S ++ D + + Sbjct: 121 KITLKVSGSGQVGQWVREREIDLGITGAFIEGES----------LECRPWIDDQLVLIVN 170 Query: 186 KDHPALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERT---IAMSLPEFEQS 241 H P I + ++ L+E M L Sbjct: 171 PSHRWASLGAVQASELKNEPMIMREHDSGTRRTIEKKLKECNLSLEKIPQGMELGSTRAV 230 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 + L ++ RY + + + + + HK+ Sbjct: 231 ITAVEA--GLGVSIVSRYAAREALELG-RVKEV-----QVTGLNMNRSLYQVRHKQGIEG 282 Query: 302 PKIVWLRETIKN 313 I E I + Sbjct: 283 FAIRAFTEFIND 294 >UniRef50_B0MH18 Putative uncharacterized protein n=4 Tax=Bacteria RepID=B0MH18_9FIRM Length = 304 Score = 212 bits (541), Expect = 1e-53, Method: Composition-based stats. Identities = 45/311 (14%), Positives = 100/311 (32%), Gaps = 22/311 (7%) Query: 6 TTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPT 65 +++L L L + ++ T AA + + SA+SK++ + D L + T Sbjct: 8 RSMNLKQLTYFVALAKNQNFTTAANELFICQSALSKTIKAMEEDLDVQLVDRTAKRFCLT 67 Query: 66 PLMVSMEQNLAEWMQMSNLLLDKPHH-QTPRGLKFELAAESPLMMIMLNALSKQIYQRYP 124 P + Q + ++ N ++ + + + I ++ + + YP Sbjct: 68 PEGRMLYQEGRDALESINNQMEHLRDCINAENGEISVGIPPVISTIYFASIIQGFRKAYP 127 Query: 125 QATIKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVW 183 + + +++ + + GE+DIG +L +F + Sbjct: 128 GIRLVIAEEGANTVKEKVQSGEIDIGVV----------ILPFASDDFHILPVFKSDNVLT 177 Query: 184 LRKDHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 + DHP + IS+ + G E I M +++ Sbjct: 178 VSTDHPFAGREKAAFRELRNEEFISLDKTFMLHSRTRELCHMSGFEPNIVMESSQWDFVA 237 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 M N +A PR ++ ++ L + + L+ K + Sbjct: 238 EMV--SLNQGVAILPRPILSRFNSDKIKILTL-------TEPEFPWDIALIIRKDKYVSN 288 Query: 303 KIVWLRETIKN 313 I + +K Sbjct: 289 PIRHFQTYVKE 299 >UniRef50_Q2KYC5 LysR-family transcriptional regulator n=9 Tax=Burkholderiales RepID=Q2KYC5_BORA1 Length = 306 Score = 212 bits (541), Expect = 1e-53, Method: Composition-based stats. Identities = 71/317 (22%), Positives = 121/317 (38%), Gaps = 22/317 (6%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 + LDLNLL+ Q L++ER+++ A+R++++ AVS +L +LR F D LFV + G+ P Sbjct: 10 LRKLDLNLLVVFQHLLEERNISAVARRLDLSQPAVSNALRRLRLAFGDELFVRTAQGMLP 69 Query: 65 TPLMVSMEQNLAEWMQMSNLLLDKPHHQTPR--GLKFELAAESPLMMIMLNALSKQIYQR 122 TPL M ++E + + + L D P + +A + + L + + Sbjct: 70 TPLAEGMGGQVSEALSLLSHLADAAQPFDPATSQRRLRIAMSDAGEIHFMPTLMELCARH 129 Query: 123 YPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCV 182 P I D + G VD+ L I +LF Sbjct: 130 VPGVRIDSLRCT-DLQRELDTGRVDLALGA----------FDGLGSGIVQRMLFRQGYAT 178 Query: 183 WLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 R HP + + F H+ + + ++ L+ G S+P F Sbjct: 179 LFRAGHPRAYAGMSARAFRAEQHLVVS-RAAPDGQINQALERAGVVLQEQFSVPHFAAVP 237 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 ++ + D L + L ++ LP+ Q L WH+R + Sbjct: 238 YIVSTTDLLA-TVPEKLAASAAPRFGLQVLTLPIKVPLLQTN-------LYWHRRFQRDG 289 Query: 303 KIVWLRETIKNLYASMA 319 WLR I + +A A Sbjct: 290 ANQWLRGLIIDTFADRA 306 >UniRef50_D1SW87 Transcriptional regulator, LysR family n=1 Tax=Acidovorax avenae subsp. avenae ATCC 19860 RepID=D1SW87_9BURK Length = 330 Score = 212 bits (541), Expect = 1e-53, Method: Composition-based stats. Identities = 68/321 (21%), Positives = 120/321 (37%), Gaps = 23/321 (7%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 +I ++DLNL L Q + RSVT A +R+ +T SAVS +L ++R F+D LFV S G+ Sbjct: 1 MNIHSIDLNLFLVFQAIFATRSVTLAGERLGMTQSAVSNALKRMRERFNDVLFVRSAEGM 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQIY 120 PTPL + + E + + +D+ F +A ++M+ L Sbjct: 61 VPTPLAERLIGPVEEGLAAFSQAVDQGRTFEAGTSGRLFRIAVNDIGQLVMMPRLLSLAR 120 Query: 121 QRYPQATIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 P + + ++ + G++D+ E S + LF + Sbjct: 121 GLAPGIRFETVDVPRAEARQRMLHGQIDVALGSWEPMGPS----------FYQQRLFDET 170 Query: 180 PCVWLRKDHPA-LHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGR--ERTIAMSLP 236 V + + P + LD +L HI+ + L L+ +G R + ++ Sbjct: 171 FVVLVARASPLGTRDSIALDDYLAAEHIAYRPRGTTDHQLQQALERVGALDRRRVVLTAA 230 Query: 237 EFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHK 296 + A +L A L ++ P + WH+ Sbjct: 231 HSLGLSSIVATTGLVLTAPQRLAQAMVASRSDLHILNAPFEV-------APFEISQQWHE 283 Query: 297 RNSHNPKIVWLRETIKNLYAS 317 R + WLRE + L+ Sbjct: 284 RFHQDSGNRWLRELMFGLFHE 304 >UniRef50_Q15XJ4 Transcriptional regulator, LysR family n=1 Tax=Pseudoalteromonas atlantica T6c RepID=Q15XJ4_PSEA6 Length = 299 Score = 212 bits (541), Expect = 1e-53, Method: Composition-based stats. Identities = 53/319 (16%), Positives = 130/319 (40%), Gaps = 23/319 (7%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 LDLNLL+ L L+ ER+VT+A +RI+++ S +S ++++LR +FDD LFV L Sbjct: 1 MRFKGLDLNLLVALDALIAERNVTRAGERIHLSQSGMSSAVSRLRQYFDDELFVQVGREL 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLL--DKPHHQTPRGLKFELAAESPLMMIMLNALSKQIY 120 PT L ++ + + + + + +AA M+++ + ++ Sbjct: 61 IPTSLTETLAKPVRRILVEMENTIISRPKFDPASDERCYRIAASELTTMVLMPTVISRLA 120 Query: 121 QRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 Q P + L D + +G++D+ ++ ++ ++ + Sbjct: 121 QDAPNIRLNLSTIGET--DLLDKGDIDLMIIPKQFTQD----------GHPFDEIYQEGY 168 Query: 181 CVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQEL-GRERTIAMSLPEFE 239 +++ ++ + + + H+ + + +++ A D+ G R + + Sbjct: 169 KCICWQENTSIGEKITFEDYQSAGHVVVSYGKNNAPAFDSWFMSHYGISRRVEIMTSNLL 228 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 + + R Q +Q + ++ P+ Q ++ +H+ Sbjct: 229 APPSLIIGTQRIA-TVHSRLAQIVSQSLPIRVLQPPIEIPPLTQ-------SMQYHRNRE 280 Query: 300 HNPKIVWLRETIKNLYASM 318 ++ + WLR+ I ++ ++ Sbjct: 281 NDVGLSWLRQLIIDVAKTI 299 >UniRef50_Q39IT2 Transcriptional regulator, LysR family n=8 Tax=Burkholderia RepID=Q39IT2_BURS3 Length = 309 Score = 212 bits (541), Expect = 1e-53, Method: Composition-based stats. Identities = 45/314 (14%), Positives = 101/314 (32%), Gaps = 20/314 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +DL L +++ +VT A++ ++V AVS+ + L L S G++PT Sbjct: 1 MDLRQLRYFVKVVECGNVTHASEALHVAQPAVSQQMRNLEQDLGMQLLERSVRGVAPTAA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKP-HHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 ++ Q+ E ++ ++ + + + S ++ L++ + RYP Sbjct: 61 GRTLYQHALELLRQADGTRELLRRDADTPQGRVTVGMPSSTARVLAIPLARAVRDRYPGI 120 Query: 127 TIKLRNWDYDSLDAITRG-EVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 ++L LD + +D+ R I L ++ + Sbjct: 121 MLELIEAPSADLDTLLERTRLDLAIVVDAVDTR----------GIAIHRLLTETLYLITW 170 Query: 186 KDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMA 245 LD + P + + +D ++E G I+ Sbjct: 171 PGFQVPGDPVPLDAIAQMPLVLPSAPNTIRNRVDWAMREAGLSYEISFEASSTGLLFAAV 230 Query: 246 AQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIV 305 L + P + + + L + +L WH + + Sbjct: 231 MAQ--LGVTILPWTAAH------VEIEERKLKLSTVAHRLFARDLSLCWHDTALVSNAVQ 282 Query: 306 WLRETIKNLYASMA 319 ++ I L+ ++ Sbjct: 283 KVKAEIVRLFDTLG 296 >UniRef50_A6UMN5 Transcriptional regulator, LysR family n=1 Tax=Sinorhizobium medicae WSM419 RepID=A6UMN5_SINMW Length = 296 Score = 212 bits (541), Expect = 1e-53, Method: Composition-based stats. Identities = 35/315 (11%), Positives = 96/315 (30%), Gaps = 26/315 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++ LL + +E +AAKR+N++ ++K + +L LF + + T Sbjct: 1 MEHRLLQSYVAVAEELHFGRAAKRLNISQPPLTKQIQQLERELGVALFERTKRKVELTAA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPH-HQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + ++ + + + + + ++ + + + YP Sbjct: 61 GSVLLEEARRLLRQTENAAELVRKTERGETGHLAVGFIDAAIYSLVPNVVECFTRSYPHV 120 Query: 127 TIKLRNWD-YDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 T++L + D + ++ G +D+GF + E + + V + Sbjct: 121 TVELADLRIPDQVRGVSEGRLDVGFIHPPIRGEQ----------LAIETVLVEPLVVAVP 170 Query: 186 KDHPAL-HQTWNLDTFLRYPHISICWE--QSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 + H L I + + + Q G I + + Sbjct: 171 QRHRLASRAEIPLAELANEALIQFPRSINPTLYDEIIGLCQSSGFNPKIVREATPKQTII 230 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 + L ++ PR + + + + L + ++++ P Sbjct: 231 GLV--SVGLGVSLLPRCLENLKRDG--------VAYRPISGPNLSIDTSIIYRSDRLR-P 279 Query: 303 KIVWLRETIKNLYAS 317 ++ + Sbjct: 280 ATKAFINVVRTVARE 294 >UniRef50_C6CWT6 Transcriptional regulator, LysR family n=5 Tax=Bacillales RepID=C6CWT6_PAESJ Length = 302 Score = 212 bits (541), Expect = 1e-53, Method: Composition-based stats. Identities = 47/310 (15%), Positives = 97/310 (31%), Gaps = 19/310 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L + + T+AA+ ++ PS V+ + L LF L+ T Sbjct: 1 MELRQLNTFCTVATTLNFTRAAEALSYVPSNVTMQIKALEEELGVRLFDRLGKQLALTTA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQAT 127 + ++ + H ++A + L + ++ ++P Sbjct: 61 GKRFLTHAQGVLEKLDEARSVVHDNAQLSGTLTISANEVICSYRLPPVFQRFRSQHPGVR 120 Query: 128 IKLRNWDYDSLDA-ITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRK 186 + R+ L + G DI + E L + + Sbjct: 121 LIFRSVPNQELKQTLFEGTTDIV---------YMLDEPICSSGLVVEPLVEENFRLLAAP 171 Query: 187 DHPALHQTW-NLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMA 245 DHP +T L+ F ++ D ++ G + + E A Sbjct: 172 DHPLAKRTVLKLEDFHEEVFLTNEKGCPYRTMFDRSFEKEGIDSITYLEFQSAEAIKKCA 231 Query: 246 AQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIV 305 + +A P ++ + LV LP + Q +L HK +P ++ Sbjct: 232 IS--GIGIAFLPEIVVE-AEVERGELVVLPWQIPDLQVYTQ-----MLRHKDKWLSPIML 283 Query: 306 WLRETIKNLY 315 E +N++ Sbjct: 284 SFIEATRNVF 293 >UniRef50_Q632J2 Transcriptional regulator, LysR family n=5 Tax=Bacillales RepID=Q632J2_BACCZ Length = 297 Score = 212 bits (541), Expect = 1e-53, Method: Composition-based stats. Identities = 36/309 (11%), Positives = 88/309 (28%), Gaps = 23/309 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +D+ L +++ER ++ AA+R++++ +S+ L + L + L T Sbjct: 1 MDMRQLRYFIAIVEERKISAAAERLHISQPPLSQHLKAMEDELGTKLMERNGKFLGVTEA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQ-TPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 ++ + + + + K + + L L + ++ YP+ Sbjct: 61 GKALYKYALQMNHLMEEAKMEVKEVGNGVSGKLTIGIN-TFSVSGLPDLLHRFHKEYPRV 119 Query: 127 TIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 T K+ + +++ L+++ Sbjct: 120 TYKVHQNESSHLCQLVRERVIEMAIIRLPLDL----------NDFSAIHLYTEPFYFITS 169 Query: 186 KDHPALHQTWNLDTFLRYPHISICWEQ-SDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 + + L +P I E + + + I + L + Sbjct: 170 NEKQLFNHQVTLADIQNHPLILPSTEGLGVHYMILEAFSKAQLHPNIIAECSDISLLLDL 229 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 A N A P Q + + + L +L+W K + + Sbjct: 230 VAC--NFGAAIVPETVINQYQNYNIQAF-------KITDTDLIASTSLIWLKNHYLSKAA 280 Query: 305 VWLRETIKN 313 E + Sbjct: 281 QNFIELLTE 289 >UniRef50_C6J497 Transcriptional regulator n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6J497_9BACL Length = 306 Score = 212 bits (541), Expect = 2e-53, Method: Composition-based stats. Identities = 38/309 (12%), Positives = 86/309 (27%), Gaps = 21/309 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++ LL + ++ TKAA+R+ +T +S + L L T Sbjct: 1 MEHRLLEYFIAVGEDLHFTKAAERLGITQPTLSHQIRLLEQELGTALIQRIGKKNYLTQA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTP-RGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + ++ + + T + + + +L +++YP Sbjct: 61 GSILLEHARRVIYEVEQAKLEIGQITGVQRGQLRIGCS---GNHLLEDKLISFHRQYPGI 117 Query: 127 TIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + + ++ + ++D+G L I LF + + + Sbjct: 118 ELTVLELATEETRAGLLANQLDLGVVF----------LPLQDEHIVSRPLFDEALVLVVS 167 Query: 186 KDHPALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 H L+ + P + + LD E G E M L E + M Sbjct: 168 SQHAYAELPEVTLEQVAQLPLVLFPPKFYVRQLLDTACAEQGIEIRPVMELSTMESQVQM 227 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 Y + + + F + L++ + +P + Sbjct: 228 VIHHVG-GTVLPGSYARTLTSTN----RRSGITFIPLAEPVPHKNVGLVYRRSTFMDPTL 282 Query: 305 VWLRETIKN 313 + Sbjct: 283 QAFIRHLTE 291 >UniRef50_Q081Z6 Transcriptional regulator, LysR family n=1 Tax=Shewanella frigidimarina NCIMB 400 RepID=Q081Z6_SHEFN Length = 303 Score = 212 bits (541), Expect = 2e-53, Method: Composition-based stats. Identities = 68/315 (21%), Positives = 123/315 (39%), Gaps = 22/315 (6%) Query: 7 TLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTP 66 +DLNL + + E ++TKAA +N++ AVS SL KLR FDD LF+ + PTP Sbjct: 2 KIDLNLFVVFDAIYCEGNITKAASVLNLSQPAVSHSLGKLRTHFDDALFIRQGNEMRPTP 61 Query: 67 LMVSMEQNLAEWMQMSNLLLDKPHHQTPRGLK--FELAAESPLMMIMLNALSKQIYQRYP 124 + ++ ++ E + + L + P + F L+ L L L + + P Sbjct: 62 VAKNVIDDVREALHQLQVCLVQSRQFEPLTSRKSFSLSLHGSLEPYYLPILQQSLSLESP 121 Query: 125 QATIKL--RNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCV 182 + R + + + G++D+ + I + L D V Sbjct: 122 SINLSSNKRVRRTELENKLASGDIDLAIDTLIP----------VSNNIMHTQLELDQLVV 171 Query: 183 WLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 RK+HPA++ +L T+L+ H+ + + D L +G R I++ + Sbjct: 172 VARKNHPAMNPDLDLATYLKLDHVLVSSRSTGPSLEDFELSRIGLHRKISLRCQHALSAC 231 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 + D LL Y+++ + + +P+ ++ L WH P Sbjct: 232 RVILNNDMLL-TLPKTAAAMYSKMLDIDIHPMPVELP-------DIGVHLYWHVNVDKEP 283 Query: 303 KIVWLRETIKNLYAS 317 WLR + Sbjct: 284 ANKWLRNKMIIAATE 298 >UniRef50_C9PFK4 Transcriptional regulator substrate-binding of LysR family protein n=1 Tax=Vibrio furnissii CIP 102972 RepID=C9PFK4_VIBFU Length = 304 Score = 212 bits (540), Expect = 2e-53, Method: Composition-based stats. Identities = 45/309 (14%), Positives = 95/309 (30%), Gaps = 25/309 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L L + TK A ++N+ SA+S S+ KL L + + T Sbjct: 1 MELKRLQYFVALAANGNFTKTADQLNIAQSALSVSMQKLEKEIGLKLINRTNRQIQLTSD 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + + ++ L + K + + L + YP Sbjct: 61 GMRLLFHARRILEDVALAEIEMDELKGLERGKIDFGVSAMLGSYFFPEALAAFTETYPNI 120 Query: 127 TIKLRNWDYDSLD-AITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 I ++ +L+ + G +D+ F + + Y L + + Sbjct: 121 RIHIQEHGTATLEKMLLEGALDLAFVRTDQPLEQ----------LRYVALCPEEIVACVN 170 Query: 186 KDHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 K HP ++ +L+ F + P I A+ + I E + Sbjct: 171 KSHPFAQRSEVSLEQFCQQPLILFRDGYLLREAISRYCRNNNITPDIRYETNLIELVKAL 230 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 + + R PLV +P ++V F + W + + Sbjct: 231 LKKDIGIS-TCLRRII-----HDNEPLVCVPF------NPPIKVEFGIGWKSSHYLSNAA 278 Query: 305 VWLRETIKN 313 + +++ Sbjct: 279 RAFLKFMED 287 >UniRef50_A4J6T9 Transcriptional regulator, LysR family n=1 Tax=Desulfotomaculum reducens MI-1 RepID=A4J6T9_DESRM Length = 299 Score = 212 bits (540), Expect = 2e-53, Method: Composition-based stats. Identities = 51/311 (16%), Positives = 110/311 (35%), Gaps = 32/311 (10%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L+ L ++ ++++++ AA+ I++T A+SK L+ L A+F L G+S TP Sbjct: 1 MNLSTLQTFIVVAEKKNLSLAAQEIHITQPAISKQLSVLEAYFGTALVERKGRGVSLTPA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 ++ E ++ N + + + L A + +L + + YP Sbjct: 61 GELFYRHAREMLEQLNKAEREIRQMSGEIRGRMILWASTIPGHYILPPIIGTFKKEYPDV 120 Query: 127 TIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 L+ D +++ + + + I+ FSD V Sbjct: 121 QTVLQIGDSKEAIRKLLEESAHLA----------AVGILPNNKRIEGIKFFSDELVVIAP 170 Query: 186 KDHPALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRE---RTIAMSLPEFEQS 241 DHP ++ + P + ++ L + G IA+ L Sbjct: 171 TDHPFAELNEVPIEKLAKEPLVWRELGSGTRSVVETFLTKGGLSTDKLNIALELGSTGAI 230 Query: 242 LFMAAQPDNLLLATAPRYC----QYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKR 297 + ++ R+ Q N++ L + LP ++ L++ +R Sbjct: 231 VTAVEA--GAGVSVVSRWATLKEQALNKIATLKIKDLP----------MQRDLFLVYPRR 278 Query: 298 NSHNPKIVWLR 308 + +P I Sbjct: 279 KNRSPMIDAFI 289 >UniRef50_Q67NJ1 LysR family transcriptional regulator n=1 Tax=Symbiobacterium thermophilum RepID=Q67NJ1_SYMTH Length = 311 Score = 212 bits (540), Expect = 2e-53, Method: Composition-based stats. Identities = 50/313 (15%), Positives = 103/313 (32%), Gaps = 24/313 (7%) Query: 6 TTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPT 65 +++ L L +++E S T+AA+ +N+T +V+K + L + LF + T Sbjct: 9 SSMLLQHLTTFCRVVEEGSFTRAAQVLNLTQPSVTKQVGALEDYLQVQLFTRQGKRVHLT 68 Query: 66 PLMVSMEQNLAEWMQMSNLLLDKPHHQT-PRGLKFELAAESPLMMIMLNALSKQIYQRYP 124 P+ + + + + + P + + + L L + +P Sbjct: 69 PVGELVYDYARQVIHLVQRCEEAVREYRSPGSGSVTVGCVHTIGLFTLPELLAAYVREHP 128 Query: 125 QATIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVW 183 + I ++ + +++ + GEVD+G + I+ LF D V Sbjct: 129 RVKINVKTGNNRETVTMLLHGEVDVGLVTTP----------QVHERIEVVPLFEDPLVVV 178 Query: 184 LRKDHPALHQ---TWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQ 240 + + P I D VL+E+G + M E Sbjct: 179 AGPS--FAADLPPVVSNADLAQLPFIGYVRGARFRMTTDQVLEEMGIQPQFVMEFDNHEA 236 Query: 241 SLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 M A +A P + LV L +P +L +L+ + Sbjct: 237 IKTMVA--LGFGIALEPVSAVQRELISG-QLVRLNVP----GLPRLSRTTSLILRRGERR 289 Query: 301 NPKIVWLRETIKN 313 + + ++ Sbjct: 290 SEAVRAFLSLLEQ 302 >UniRef50_A9R140 Substrate-binding transcriptional regulator, LysR family n=34 Tax=Enterobacteriaceae RepID=A9R140_YERPG Length = 322 Score = 212 bits (540), Expect = 2e-53, Method: Composition-based stats. Identities = 59/313 (18%), Positives = 121/313 (38%), Gaps = 27/313 (8%) Query: 4 SITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLS 63 + ++DLNLL +MQ ++VT+AA+ + ++ AVS ++A+L+ F+D LFV G+ Sbjct: 25 HLRSVDLNLLTVFDAVMQMQNVTRAAQSLGMSQPAVSNAVARLKVMFNDELFVRYGRGIQ 84 Query: 64 PTPLMVSMEQNLAEWMQMSN-LLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQR 122 PT + + + +Q+ L F L+ SPL + + + +++ Q Sbjct: 85 PTARARQLFGPVRQALQLVQNELPGAGFEAKNSERLFNLSICSPLDVRLAAQIVQRVKQS 144 Query: 123 YPQATIKLRN-WDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPC 181 P + +++ + + + E + E LF D Sbjct: 145 APNVQLVIKSYLNDNIEHQLRYQETEFVIGYTEFDRP----------DFHRIPLFKDELV 194 Query: 182 VWLRKDHPALHQTWNLDTFLRYPHISIC---WEQSDTWALDNVLQELGRERTIAMSLPEF 238 + + KDHP ++ + + L H + D+ +IA + Sbjct: 195 LAVSKDHPRINDSITENQLLSESHAVVSLDKKGSFSEPYYDSTTSTQ----SIAYESTDM 250 Query: 239 EQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRN 298 L + +Q + +A + Y++ L L++LP + L WH+ Sbjct: 251 NSVLNIVSQTYFVAIA-PRWLVKTYSEALNLKLISLP-------WENTSRACYLTWHEST 302 Query: 299 SHNPKIVWLRETI 311 + W++ + Sbjct: 303 DRDKGHQWMKALL 315 >UniRef50_C7H9N7 Transcriptional regulator, LysR family n=2 Tax=Faecalibacterium prausnitzii RepID=C7H9N7_9FIRM Length = 291 Score = 212 bits (540), Expect = 2e-53, Method: Composition-based stats. Identities = 48/307 (15%), Positives = 97/307 (31%), Gaps = 19/307 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L + + + S ++AA+ + + SAVS +A+L A + PLF + T Sbjct: 1 MELRTINTFLHIAELHSFSRAARELGYSQSAVSAQVAQLEAELETPLFDRVGKTVRLTDA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQAT 127 + + + +A + L L ++ + PQ Sbjct: 61 GQTFLTYARSLLATAEQAKAALQPARQVSGTLRVALADSVCSTFLPDLLQRYHALCPQVE 120 Query: 128 IKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRK 186 + LR D L + ++D+ ++ + + +L+ + CV Sbjct: 121 LVLRTATDDEMLQMLGSNQIDLAYTLDKPLLQPSFVLAVDEP---------EPICVVAPA 171 Query: 187 DHPALHQ-TWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMA 245 HP Q L + S ALD + G + L M Sbjct: 172 GHPLAGQAEVTLQELAGQEFLLTERGMSYRDALDQCMAAQGLAIKPFLELGSASLLCQMV 231 Query: 246 AQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIV 305 + L+ P Y L L +P + ++ L +H+ P++ Sbjct: 232 EH--GMGLSFLPEYIVQNALAAG-TLARLNVPACRVEMRRQ-----LFYHRDKWLTPQMK 283 Query: 306 WLRETIK 312 ++ Sbjct: 284 AFITLVQ 290 >UniRef50_C1F961 Transcriptional regulator, LysR family n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F961_ACIC5 Length = 288 Score = 212 bits (540), Expect = 2e-53, Method: Composition-based stats. Identities = 32/256 (12%), Positives = 78/256 (30%), Gaps = 15/256 (5%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++ + L + + + + ++AA+R V ++S+ + KL LF L T Sbjct: 1 MEFHQLRYVCAIAETGNFSRAAERCQVAQPSLSQQVLKLEEDLGVKLFDRLGRSLRITEA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHH-QTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + + + + ++ + ++YP+A Sbjct: 61 GRAFLPHARSILHQMEAARASVAGKSKDVRGSVAVGVIPTIAPYLMPRYTAAFARKYPEA 120 Query: 127 TIKLR-NWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 +++ ++++ +D+ L ++ L ++ L Sbjct: 121 RLRIVEETTPVLVESLRNLSIDLAV----------LALPLRHKDLECIPLLTEPMFAVLP 170 Query: 186 KDHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 KDHP QT +L + + IA +F M Sbjct: 171 KDHPRASAQTLSLKDLRGETFVMLRDGHCFRDLSLAACSHARVTPRIAFESGQFRSLFGM 230 Query: 245 AAQPDNLLLATAPRYC 260 A + ++ P+ Sbjct: 231 VAA--GMGVSLVPQMA 244 >UniRef50_Q7W708 Putative LysR-family transcriptional regulator n=2 Tax=Bordetella RepID=Q7W708_BORPA Length = 298 Score = 212 bits (540), Expect = 2e-53, Method: Composition-based stats. Identities = 42/298 (14%), Positives = 97/298 (32%), Gaps = 25/298 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +DL + + +ERS ++AA+R++++ +S+ + L + PLF P G+S T Sbjct: 1 MDLKQMRYFVAVAEERSFSRAAERLHISQPPLSQQIKALEEELNAPLFHRLPRGISLTAA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNALSKQIYQRYPQA 126 ++ ++ + L + + S + ++ + Q+ + P + Sbjct: 61 GAALLKSSRAILANVRLAAQETTQIAAGMLGTVRMGTVSSALAHLVPYILTQVKRSMPGS 120 Query: 127 TIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 ++L + A+ R E+DIG + + + + Sbjct: 121 KVELTEMSSREQTLAVLRDELDIGLVHTPIDTA----------DLRTRQILREPFYAAVP 170 Query: 186 KDHPAL-HQTWNLDTFLRYPHISICWE--QSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 HP + + + + ++ G I + L Sbjct: 171 SQHPLASREAVPVAELASEEFVFFPRTLASGLFDKMVSLCMNAGFSPKIHHTARHQSTML 230 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 M A L + PR Q + + F + +L+W + ++ Sbjct: 231 QMVA--MGLGVTIVPRSLQRIYKGSAV--------FLPLTGTPHYLELSLIWRESTAN 278 >UniRef50_P52696 Uncharacterized HTH-type transcriptional regulator ybhD n=68 Tax=Proteobacteria RepID=YBHD_ECOLI Length = 317 Score = 211 bits (539), Expect = 2e-53, Method: Composition-based stats. Identities = 45/317 (14%), Positives = 103/317 (32%), Gaps = 27/317 (8%) Query: 1 MKKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPL 60 MK ++++ +L + S AAK +N+T A+++ + K+ LF + Sbjct: 1 MKHELSSM-----KAFVILAESSSFNNAAKLLNITQPALTRRIKKMEEDLHVQLFERTTR 55 Query: 61 GLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTP-RGLKFELAAESPLMMIMLNALSKQI 119 ++ T + E ++ + L LA + L + Sbjct: 56 KVTLTKAGKRLLPEARELIKKFDETLFNIRDMNAYHRGMVTLACIPTAVFYFLPLAIGKF 115 Query: 120 YQRYPQATIKLRN-WDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSD 178 + YP +++ + ++++ E D G + S ID+ L ++ Sbjct: 116 NELYPNIKVRILEQGTNNCMESVLCNESDFGINMNNVTNSS----------IDFTPLVNE 165 Query: 179 VPCVWLRKDHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPE 237 + R+DHP + + Y I + + ++ L + + + Sbjct: 166 PFVLACRRDHPLAKKQLVEWQELVGYKMIGVRSSSGNRLLIEQQLADKPWKLDWFYEVRH 225 Query: 238 FEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKR 297 SL + L ++ P + ++ +PL + ++ K Sbjct: 226 LSTSLGLVEA--GLGISALPGLAMPHAPYSS--IIGIPLVEPVIR-----RTLGIIRRKD 276 Query: 298 NSHNPKIVWLRETIKNL 314 +P + NL Sbjct: 277 AVLSPAAERFFALLINL 293 >UniRef50_A9F7Y4 Transcriptional regulator, LysR family n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9F7Y4_SORC5 Length = 327 Score = 211 bits (539), Expect = 2e-53, Method: Composition-based stats. Identities = 47/312 (15%), Positives = 99/312 (31%), Gaps = 28/312 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +DL L + +ER +AA+R+ + +S+ + L + LF S + TP Sbjct: 1 MDLRHLRYFTAVAEERHFGRAAQRLGIAQPPLSRQIQDLESELGFSLFDRSRRRVELTPA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQT-PRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + ++ L + + + + + S L + L + P Sbjct: 61 GAVLLAHVRRVFDALELAVHEARRASVGETGRLVVGYLSSLAYSGITELVRTFRGELPAV 120 Query: 127 TIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + LR + ++A+ G +D+GF H + E + + V L Sbjct: 121 ELALREMPPQEQIEALKDGRIDVGFVRAPLHDA----------RLASECVRREPLLVALP 170 Query: 186 KDHPA-LHQTWNLDTFLRYPHISIC--WEQSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 DHP + L+ R P + + + + + G IA + L Sbjct: 171 ADHPLAARKRIPLELLSREPFVVFPRQRGSAFFDLVMGLCRAAGFSPRIAQEALHLD-IL 229 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 + A ++ P + + L L + + W +P Sbjct: 230 SLVAA--GFGVSILPESIKNVGRK-GLALRPI--------VGAPSTDLLVAWRAD-DASP 277 Query: 303 KIVWLRETIKNL 314 + ++ + Sbjct: 278 TLRQFLSFVRRV 289 >UniRef50_A4GJC2 Transcriptional regulator LysR family protein n=1 Tax=uncultured marine bacterium EB0_49D07 RepID=A4GJC2_9BACT Length = 303 Score = 211 bits (539), Expect = 2e-53, Method: Composition-based stats. Identities = 68/321 (21%), Positives = 134/321 (41%), Gaps = 26/321 (8%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 I++ DLNL + + + E S+TKAA+ + +T AVS +L++LR FDD LFV + G+ Sbjct: 1 MKISSFDLNLFVIMNSIYTEGSLTKAAEVVGITQPAVSNALSRLREKFDDELFVRTGSGM 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTP--RGLKFELAAESPLMMIMLNALSKQIY 120 PT ++ Q++ +Q+ +++P P F ++ +L L +I Sbjct: 61 VPTQKTENIIQDIQNALQLMQKSVNEPDEFNPKTSERTFRISLGDINEGRILAILMSKIG 120 Query: 121 QRYPQATIKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 + P I+ D + A+ E+ + + + +FSD Sbjct: 121 KSAPHVKIESYYSARDQVPHALATNELSFAVDPFIPNSKDTNSM----------KVFSDK 170 Query: 180 PCVWLRKDHPALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEF 238 V R +H + NL+ L+ +I+I + ++ +Q++ + +A+ + Sbjct: 171 FVVAHRANHDVSKIENLNLEEMLKLKYINISNRKRGASVVEMEMQKMQLQPEMALRAQHY 230 Query: 239 EQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRN 298 + + D LL + + + H L V LP +Q L+WH + Sbjct: 231 LVTPEIVRSSDLCLLC-----AETFAKKHGLSYVELPFKVPALEQ-------YLIWHNSD 278 Query: 299 SHNPKIVWLRETIKNLYASMA 319 ++ +W+R I + + Sbjct: 279 DNDGSHIWMRNLIAESFKEVG 299 >UniRef50_A0K8T5 Transcriptional regulator, LysR family n=55 Tax=Proteobacteria RepID=A0K8T5_BURCH Length = 308 Score = 211 bits (539), Expect = 3e-53, Method: Composition-based stats. Identities = 42/274 (15%), Positives = 88/274 (32%), Gaps = 18/274 (6%) Query: 6 TTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPT 65 T++L L + +E +AAKR+ ++ A+S + K LF + ++ T Sbjct: 7 DTVELRQLRYFVAVAEELHFGRAAKRLFISQPALSFDIRKFEDALGVQLFSRTNKTVALT 66 Query: 66 PLMVSMEQNLAEWMQMSNLLLD-KPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYP 124 + + ++ + + + ++ L ++ YP Sbjct: 67 NAGEVLLGEARRLLLQADEAERLTVRSASGLAGRLRIGFVHSMLYRGLPDAVRRFEADYP 126 Query: 125 QATIKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVW 183 + L + + AI RG++D+G P ++ ++++ Sbjct: 127 GVEVVLSEMNTHAQVQAIQRGQIDLG----------YAHWGHFPPEVESVAVYAEPFVCC 176 Query: 184 LRKDHPALHQT-WNLDTFLRYPHISICWE--QSDTWALDNVLQELGRERTIAMSLPEFEQ 240 L HP + L T P I + + G I ++ Sbjct: 177 LPAAHPLARRRQVALATLATEPFILFPRDAAPHYHDLIIAQCVNAGFSPLIRHEARLWQT 236 Query: 241 SLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVAL 274 L M + +A PR Q + +L + L Sbjct: 237 ILSMIE--FGMGIALVPRVLQQ-AKSDRLAFLPL 267 >UniRef50_Q7MC61 Transcriptional regulator n=9 Tax=Gammaproteobacteria RepID=Q7MC61_VIBVY Length = 313 Score = 211 bits (538), Expect = 3e-53, Method: Composition-based stats. Identities = 68/316 (21%), Positives = 128/316 (40%), Gaps = 23/316 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +DLNLL ++M+ RSV +AA+ + +T AVS +L +LR + DPLF+ G++PT Sbjct: 15 MDLNLLKTFDVVMKTRSVNEAAETLGITAPAVSHALNRLRDQYQDPLFIRQGRGITPTNF 74 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQIYQRYPQ 125 + + + E + + P F L++ + +++L L + Q P Sbjct: 75 AIELHAEIQEPLSLLLNGAKSRQQFNPDTSHRTFRLSSHKDIDLMLLPPLMDHLAQHAPN 134 Query: 126 ATI--KLRNWDYDSLDA-ITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCV 182 + + + D A + +VD+ + E+LF + Sbjct: 135 VKLCADVEHLDERDRQADLRTRKVDMILATVPFDE----------HGYHNELLFELPLVM 184 Query: 183 WLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 R+DHP + T F H+ ++ + +D++ E +R IA ++ Sbjct: 185 VCRQDHPRIQNTITHQQFFAEQHLLWETKRQNQDIVDSLALEPQPQRNIAYKTGSSCNAI 244 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 MAAQ D + + + + HQL ++ LP ++P + WH + Sbjct: 245 MMAAQTDWICVT-GQWHADLMAKAHQLQVMPLPFKL-------NKLPIYMTWHHSQQQDS 296 Query: 303 KIVWLRETIKNLYASM 318 WL+ + A+ Sbjct: 297 GHQWLKSALMQATATF 312 >UniRef50_A6WDF3 Transcriptional regulator, LysR family n=1 Tax=Kineococcus radiotolerans SRS30216 RepID=A6WDF3_KINRD Length = 306 Score = 211 bits (538), Expect = 3e-53, Method: Composition-based stats. Identities = 53/276 (19%), Positives = 97/276 (35%), Gaps = 15/276 (5%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +DL + + L ER T+AA V+ S +S ++ L LF SP + PT Sbjct: 1 MDLRQMQYVVALADERQFTRAAALSGVSQSGLSAAIRTLEDELGATLFDRSPRRVEPTDA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKP-HHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 +++ + + D + AE L ++ ++ L ++ ++R+PQ Sbjct: 61 GLALLPFARTLLAQATAARDAVVQATRRLSGTLRVGAEQCLGVVDVSTLLERFHRRFPQV 120 Query: 127 TIKLRN-WDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 I +D L + GE+D+ F H + + L + + Sbjct: 121 EIHFEQAGSHDLLGRLREGELDLVFVATTEHLGA----------LPASELGREPLVLLTP 170 Query: 186 KDHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 +HP + +P I D G R + S+ + L + Sbjct: 171 PEHPLAGRPHAPWAELAAHPFIDFVPSWGVRPITDAACAAHGVHRRVRFSVGDVHALLDL 230 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDE 280 L +A PR+ Q +L +V +P E Sbjct: 231 V--GRGLGIAIVPRHVAAKPQAARLAVVPMPPGTPE 264 >UniRef50_C3BJ72 YwqM (Probable transcriptional regulator YwqM) n=4 Tax=Bacillus RepID=C3BJ72_9BACI Length = 298 Score = 211 bits (538), Expect = 3e-53, Method: Composition-based stats. Identities = 53/311 (17%), Positives = 98/311 (31%), Gaps = 23/311 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L ++ + T+A +++ T S ++ + L +PLF + T + Sbjct: 1 MELRHLKTFIIVAESGGFTRAGEQLGYTQSTITNHIRSLEEEIGNPLFDRLGKKVILTDV 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQAT 127 M + +++SN L+ + A LM+ L A+ + ++YPQ Sbjct: 61 GEHMLSYAHKILELSNEALESSQMNGKFSGTIRIGANESLMIYRLPAVLYEFKRKYPQVH 120 Query: 128 IKLRNWDYDSLD-AITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRK 186 I L+ + L + G+ D L I L + + Sbjct: 121 IILQPSESQELHNELKSGKFDFALFTHPE---------QLGTDIVTHSLVQEKIVLIAPP 171 Query: 187 DHPALHQ-TWNLDTFLRYPHISICWEQSDTWALDNVLQELGRER-TIAMSLPEFEQSLFM 244 HP + + + + + S L+ ++E G I E Sbjct: 172 KHPLTKKVSVSPADLEGE-MLLLTEPGSYRDLLERRIKEDGINCSHIHFW--SIEAIKQT 228 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 L ++ P L LP K V L +HK P + Sbjct: 229 VMC--GLGISYLPFITVKEEIEQG-KLSVLP-----WTYSKDFVTTELAYHKSKWLTPAM 280 Query: 305 VWLRETIKNLY 315 L E I+ Sbjct: 281 KKLIEMIEKHA 291 >UniRef50_D2Q131 Transcriptional regulator, LysR family n=1 Tax=Kribbella flavida DSM 17836 RepID=D2Q131_9ACTO Length = 298 Score = 211 bits (538), Expect = 3e-53, Method: Composition-based stats. Identities = 43/308 (13%), Positives = 93/308 (30%), Gaps = 17/308 (5%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L ++ +E +V +AA R+++T ++S+ +A L LF T Sbjct: 1 MELRQLQSFVVVAEELNVGRAATRLHLTQPSLSRQIAALERDLGVELFARIRKRFVLTAA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHH-QTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 S+ + + ++ ++ + Q L +L L +PQ Sbjct: 61 GESLLADARDLLRRADDAVRDAQRTQRGELGTLRLRFVQSATFEVLPKLLGAFRDSHPQV 120 Query: 127 TIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + L ++A+ G +D+G + V+ D L Sbjct: 121 VLDLETMTTLRQVEALKDGRIDVGLLRLPEPGTQLGDTKPAE-GLASRVVSRDPLVAVLP 179 Query: 186 KDHPAL-HQTWNLDTFLRYPHISICWEQS--DTWALDNVLQELGRERTIAMSLPEFEQSL 242 HP + L + + ++ G +I + + + + Sbjct: 180 AKHPLARRRRIRLAELAAEDFVFYTRPSGPAVHDRIVGYCRDAGFTPSITQAAADVQTIV 239 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 + A + L AP + + E +L W N +P Sbjct: 240 SLVAAGLGVSLLIAPT----------PRTDPEAVVYRELSDDLPPWELSLAWSPDN-RSP 288 Query: 303 KIVWLRET 310 + + Sbjct: 289 VLQRFLQL 296 >UniRef50_Q7WNC1 LysR-family transcriptional regulator n=1 Tax=Bordetella bronchiseptica RepID=Q7WNC1_BORBR Length = 297 Score = 211 bits (538), Expect = 3e-53, Method: Composition-based stats. Identities = 41/313 (13%), Positives = 106/313 (33%), Gaps = 26/313 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L + L +E + T+AA R ++ + +S+++ L L + + + TP Sbjct: 1 MNLRHVHYFVTLAEELNFTRAAARCHIEQAPLSRAIKALERELGLTLLIRNTRNVELTPA 60 Query: 68 MVSMEQNLAEWMQMSN-LLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 ++ Q + +A + +L ++ + + YP Sbjct: 61 GRLFCDCARVALEELELGARRARRAQEGAIGQLTIAHVGSTVYELLPSIIRAFKRGYPLV 120 Query: 127 TIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 +++R + + + G++D+GF + L+++ + Sbjct: 121 DLRIRQLTTREQIPGLIAGDIDVGFVRVAPDSGQ----------LAAARLYAEPFVCAIP 170 Query: 186 KDHPALHQ-TWNLDTFLRYPHISI--CWEQSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 HP + + L P I + S + ++ ++ G E IA + + E ++ Sbjct: 171 DWHPLAGRESVALGELASSPFIMLMRSPAPSLHQQVLDLCRKAGFEPRIAQEVEQIESTV 230 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 + A + +A P + + + + +V + W R +P Sbjct: 231 GLVAS--GIGVALVPASLRKLSIRS--------VCYVPLCDVAEQVEVWVAW-PREQASP 279 Query: 303 KIVWLRETIKNLY 315 + ++ Sbjct: 280 VAQAFLQCARDTL 292 >UniRef50_C4V4C8 Transcriptional regulator n=2 Tax=Selenomonas RepID=C4V4C8_9FIRM Length = 298 Score = 211 bits (538), Expect = 3e-53, Method: Composition-based stats. Identities = 39/312 (12%), Positives = 93/312 (29%), Gaps = 25/312 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L Q+ + +++T+AA+R+ V+ ++ ++ KL + LF S LS TP Sbjct: 1 MELRQLEYFQMASRLKNITRAAERLRVSQPNITVAIKKLESELGIQLFDRSQKQLSLTPE 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + ++ + + + ++ + + + +RY Sbjct: 61 GAVFLERVEVALRNIQDAVLEVNDYKQLQKGTIKIGIPPMMGAYLFPKIFSSFQRRYSHL 120 Query: 127 TIKLR-NWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + L + + R E+D G + +LL + Sbjct: 121 DVYLHEEGSVAIREQLERDELDFGIIIIPESSPNLQLLPMT----------RSQIVCCVP 170 Query: 186 KDHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 +D + L I + + ++ G I + + + + Sbjct: 171 EDSELAERKAVTLQDIEGRNLIMLKEGSFLRQTMLQKMKAAGVSPNIVLESNQVVTIMGL 230 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 A + A + LPL V L W + + Sbjct: 231 VAS--GVGDAFLLDMIAREAHG----IRTLPLAAPVY------VDVGLAWKRDRYISRAA 278 Query: 305 VWLRETIKNLYA 316 + ++ + Sbjct: 279 QSFIDFARDTLS 290 >UniRef50_C3I9W8 HTH-type transcriptional regulator alsR n=1 Tax=Bacillus thuringiensis IBL 200 RepID=C3I9W8_BACTU Length = 292 Score = 211 bits (538), Expect = 3e-53, Method: Composition-based stats. Identities = 40/308 (12%), Positives = 95/308 (30%), Gaps = 30/308 (9%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L + L +E + ++AA+++++ +SK + L LF + + T Sbjct: 1 MELRHIRYFLALAEELNFSRAAEKLHIAQPPLSKQIKDLEEEIGAKLFNRTKRHVELTNA 60 Query: 68 MVSMEQNLAEWMQMSNLL-LDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + + T + + + ++ ++ +RYP+ Sbjct: 61 GQVFLDKSYQILDQVEQACISTRLTSTGTEGELVIGFSGSVQDLI--PTIQRYRERYPKV 118 Query: 127 TIKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 I L+ + + ++DIG + I + + Sbjct: 119 GIVLQQLSTTIQVKNLIEKKIDIGILAAPINSSK----------IHVRPVKKVCLRAIIP 168 Query: 186 KDHPAL-HQTWNLDTFLRYPHISI--CWEQSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 + HP Q+ + P I N+ Q +G I + + + Sbjct: 169 EKHPLAIKQSIYIHDLENEPFIMATKSAAPFYYETFMNLFQSVGFAPKITVQANDLQTVS 228 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 + A + + +A P + L + + E+ +L W K N + Sbjct: 229 ALVA--NGMGVALLPSSINPLSGLIHRKV----------EDINTEIEASLAWRKDN-KSE 275 Query: 303 KIVWLRET 310 + E Sbjct: 276 LLEKFLEL 283 >UniRef50_A6FY23 Transcriptional regulator, LysR family protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6FY23_9DELT Length = 339 Score = 210 bits (537), Expect = 3e-53, Method: Composition-based stats. Identities = 67/303 (22%), Positives = 124/303 (40%), Gaps = 21/303 (6%) Query: 21 QERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSMEQNLAEWMQ 80 Q SVT AA+R+ ++ AVS +LA+LR F DPL V + G+ TP + + + + Sbjct: 21 QTSSVTGAARRLGLSTPAVSHALARLRERFGDPLLVRAGRGMVLTPRAEQLRPRVRDALS 80 Query: 81 MSNLLLDKPHHQTPR--GLKFELAAESPLMMIMLNALSKQIYQRYPQATIKLRNWDYDSL 138 ++ L+ + P P F L+ ++ + ++ P +++ D Sbjct: 81 LATLVFEDPGAFEPASMERSFTLSMTDYVLRVFGGPFEARVRAAAPGVDLRVIVNAVDDA 140 Query: 139 DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPAL---HQTW 195 + + G+ D+ + +LP + + S+ +R+ HP L + Sbjct: 141 ERLRAGDTDLVVG----------IYGALPPELRTRAIISERLVCVVREAHPVLAPTKRRL 190 Query: 196 NLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQPDNLLLAT 255 L F+ H+ I +D+ L ELG R +A ++P F+ +L M A D LL Sbjct: 191 TLRQFVTLEHVQIAPRGQPGGYVDDRLAELGHARRVARAVPFFQLALEMTASSDYLL-TV 249 Query: 256 APRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWLRETIKNLY 315 + R + L ++ P +++WH R + WLRE + Sbjct: 250 SERIARQLGPELGLRVLEPPSEL-----GLEPYALSMVWHPRFDADAGHRWLREQLVEST 304 Query: 316 ASM 318 ++ Sbjct: 305 QAL 307 >UniRef50_C0BY92 Putative uncharacterized protein n=5 Tax=Firmicutes RepID=C0BY92_9CLOT Length = 311 Score = 210 bits (537), Expect = 3e-53, Method: Composition-based stats. Identities = 37/311 (11%), Positives = 99/311 (31%), Gaps = 26/311 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++LN L L T AA+++++T ++S +++ L LF ++ T Sbjct: 16 MNLNQLHYFVTLAHMEHYTNAAQKLSITQPSLSHAISSLEEELGTSLFERQGRNVALTKY 75 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQ-TPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + E + + + + K + R K ++ + + + Sbjct: 76 GRLFMEYAEEALDILDAGIKKTRAMTSERSGKVDIGYIYTQGSEFIPEVISGFLEANRDK 135 Query: 127 TIKL---RNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVW 183 ++ + ++ + + DIGF + +D+ + + Sbjct: 136 KVEFGFSNGVTKEIVEGVKEEKYDIGFCSMVTGE----------KELDFVPVSQEKLIAA 185 Query: 184 LRKDHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 + +HP ++ + YP I + + ++ G + I ++ E + Sbjct: 186 VPPEHPLAEKKSVRFEEIASYPQIFFNRGSGLRGVISQIFKDYGIKPDIVYTVDEDSAMV 245 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 + A+ + + + ++ F E + ++ K P Sbjct: 246 GLVARGFGVGIVP-----------DAATVRSMKASFLEIEDLDYRRFIYMVTLKNKYQVP 294 Query: 303 KIVWLRETIKN 313 E +K+ Sbjct: 295 VAKAFTEYVKD 305 >UniRef50_A0KG94 Transcriptional regulator, LysR family n=5 Tax=Gammaproteobacteria RepID=A0KG94_AERHH Length = 318 Score = 210 bits (537), Expect = 4e-53, Method: Composition-based stats. Identities = 66/319 (20%), Positives = 133/319 (41%), Gaps = 33/319 (10%) Query: 15 CLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSMEQN 74 LM + SVT+AA+ + ++ A+S +L +LR +F DPL V +P G+ PTP + Sbjct: 14 AFDALMAQGSVTRAAETLFISQPAMSHALNRLRTFFGDPLLVRTPQGMLPTPRAQRLHLG 73 Query: 75 LAEWMQMSNLLL--DKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQATIKLRN 132 + + +++ L ++ + +F L + +++ L +++ + P TI++R Sbjct: 74 VQQALRLLEQQLSDEEVFEPSQSKRRFVLCTTDYVECVLIPPLIQRLKRLAPAVTIEIRI 133 Query: 133 WDYDSLDA-ITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPAL 191 +A + GE+D+ E +P + E ++ +R D P Sbjct: 134 LRDTLPEAELASGEIDLVLGFDE--------YMQVPGYLGKETWLTEPLAGLVRADLPMA 185 Query: 192 --------------HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPE 237 + +L + PH+ + +LD L+ LG RTI+++ Sbjct: 186 APALAESGDEPAILAERISLAQLIEMPHVFHSPLGTSEASLDRYLKTLGFSRTISVNSQS 245 Query: 238 FEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKR 297 + + + +Q D+LL+ + L + LP + +WH Sbjct: 246 YMSAAAIVSQSDHLLV-LPSMVAELLASHWPLKSLPLPEDVP-------DYHLNCVWHPV 297 Query: 298 NSHNPKIVWLRETIKNLYA 316 ++ P +VWL++ +K L Sbjct: 298 HAQQPALVWLKDLMKELVN 316 >UniRef50_C8WRL7 Transcriptional regulator, LysR family n=2 Tax=Alicyclobacillus acidocaldarius RepID=C8WRL7_ALIAD Length = 303 Score = 210 bits (537), Expect = 4e-53, Method: Composition-based stats. Identities = 52/311 (16%), Positives = 103/311 (33%), Gaps = 20/311 (6%) Query: 13 LLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSME 72 L L ++ SV++AA+ ++VT V++ + +L F LF S L+ TP + Sbjct: 5 LRALVTVVSLGSVSEAARALHVTQPTVTRQIQQLERHFGQALFDRSGKRLALTPAGERVH 64 Query: 73 QNLAEWMQMSNLLLDKPHHQT-PRGLKFELAAESPLMMIMLNALSKQIYQRYPQATIKLR 131 E ++ L + + P + A + L A+ + +P+ ++ Sbjct: 65 AYALEVLRKQEELAESLLEMSNPEAGLVRMGAGLSPTLYRLPAMVARYASMHPRVRFQVV 124 Query: 132 NWDYDS-LDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPA 190 L+ + VD+ + ++ L+ D H Sbjct: 125 TGSSKVTLERLASRVVDLAIVTTPPEDEA---------GVEQVALWRDELVAVAPSYHAL 175 Query: 191 LHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRER--TIAMSLPEFEQSLFMAAQP 248 + + +YP + + E +D++L G ER M E Sbjct: 176 AGKRATIVELAQYPLVVMHGESGLRRQIDDLLHRAGVERPAPPVMETDSLEAMNRFVQAG 235 Query: 249 DNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWLR 308 L + P Q +L LV + + TL+W K + Sbjct: 236 LGLAVVPWPAVADDVTQ-GRLKLVHI------VGCDLGQRTVTLVWRKESHIPAAARAFI 288 Query: 309 ETIKNLYASMA 319 E + ++ A+ + Sbjct: 289 EWLASVGAASS 299 >UniRef50_A6SVA6 Transcriptional regulator, LysR family n=1 Tax=Janthinobacterium sp. Marseille RepID=A6SVA6_JANMA Length = 311 Score = 210 bits (537), Expect = 4e-53, Method: Composition-based stats. Identities = 67/328 (20%), Positives = 130/328 (39%), Gaps = 27/328 (8%) Query: 1 MKKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPL 60 M + LD++L+ L LL+ E++V++ A ++N ++S SL KLR DPL V Sbjct: 1 MSRLPDHLDIHLIRILYLLLCEKNVSRVALKLNRPQPSISASLRKLRELTGDPLLVRGAR 60 Query: 61 GLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTP--RGLKFELAAESPLMMIMLNALSKQ 118 G+ PT S+ ++ + + L P F +AA + + + Sbjct: 61 GMVPTQHGESLMKSAKRILDEAEHLFIPKTAFVPQDEARTFHIAAPDYMNTQFFTEVIAR 120 Query: 119 IYQRYPQATIKLRNWDYDS--LDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLF 176 + + P++ I + D+ + ++ GE+D+ + + +P + LF Sbjct: 121 LRRESPKSHIVIHALGPDTDYVRLLSDGELDLVIANWDE----------MPEHLHMSKLF 170 Query: 177 SDVPCVWLRKDHPALHQT----WNLDTFLRYPHISICW-EQSDTWALDNVLQELGRERTI 231 D +R D +T ++ +L PH + +D L++ R I Sbjct: 171 DDPIVCLMRSDCAYAKRTAKDAMTIEDYLSLPHAAPSQILPGYHGTIDTFLEKQNLRRNI 230 Query: 232 AMSLPEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFT 291 + F +M + D +L A ++ +Y + L +P+ F + F Sbjct: 231 VVESAHFRMLPYMVEKTDLVLTA-GQQFTSFYEKTLSLKSYTVPIKFP-------PLRFY 282 Query: 292 LLWHKRNSHNPKIVWLRETIKNLYASMA 319 LWH+R + WLR + ++ Sbjct: 283 QLWHERVHQATEHKWLRAQVCAAAKVLS 310 >UniRef50_C9YBM2 Putative uncharacterized protein n=2 Tax=cellular organisms RepID=C9YBM2_9BURK Length = 309 Score = 210 bits (537), Expect = 4e-53, Method: Composition-based stats. Identities = 46/316 (14%), Positives = 94/316 (29%), Gaps = 25/316 (7%) Query: 7 TLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTP 66 L+ L + +E KAA R++++ +S+ + +L LF + + T Sbjct: 12 RLETRQLRYFVAVAEELHFGKAAVRLHMSQPPLSQQIRQLEEGLGVTLFERTQRSVKLTY 71 Query: 67 LMVSMEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNALSKQIYQRYPQ 125 + +D + ++ ++ QRYP Sbjct: 72 AGQVFLAQARNALSKLEEAVDVVRAAARGEAGFLRCGYTAASAYAVIPSVMHAFKQRYPL 131 Query: 126 ATIKLRN-WDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 + LR D I G +DIG + E L + V + Sbjct: 132 VEVALRESLSGDQYRDIREGRLDIGLVRPFGALP----------DLATEKLIEENLIVAI 181 Query: 185 RKDHPALHQTW-NLDTFLRYPHISICWEQS--DTWALDNVLQELGRERTIAMSLPEFEQS 241 +HP Q ++ P + S ++N+L + + Sbjct: 182 PSEHPLAQQRIVDIHDLQSQPFVGFSSYGSQYFHDMVENLLGGEKVVPKLVQRATQPHAV 241 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 + + + L + ++H +V PL + L W + N + Sbjct: 242 IALVSAGLGLAIVP-----DASARVHMDRVVYRPL----HASRLPRPELHLCWRREN-IS 291 Query: 302 PKIVWLRETIKNLYAS 317 P I + + + + A Sbjct: 292 PLISNFKASAREVAAQ 307 >UniRef50_C0Z7P7 Probable transcriptional regulator n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0Z7P7_BREBN Length = 290 Score = 210 bits (537), Expect = 4e-53, Method: Composition-based stats. Identities = 42/308 (13%), Positives = 89/308 (28%), Gaps = 24/308 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +D+ L + +E +T AAKR+N+ +S+ L ++ L S + T Sbjct: 1 MDIRQLRYFIAIAEEGQITGAAKRLNMAQPPLSQQLKQMEEELGTMLVERSGKQIVLTEA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHH-QTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 +++ + + L + + L L + Q+YP Sbjct: 61 GITLYKQALNIVHQMEEALSEVKETGEGIRGTLSIGVS-ALSAYRLPEQIRVFQQKYPLI 119 Query: 127 TIKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 T K+ D L + R +++ + ++ L + + + Sbjct: 120 TYKIWKGDTQLLNQWLERRTIEVAIVRLPHSLNNCTMIP----------LEEEDFVLIVP 169 Query: 186 KDHPAL-HQTWNLDTFLRYPHISIC-WEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 P + + P I + LG E + P+ + Sbjct: 170 ATSPYADRKAIEMREIAELPLIMPSTPGLGIYDLIIKEFSRLGVEPHVICECPDISLIVS 229 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 M A + + P +Q Q+ + L + ++W + Sbjct: 230 MVASS--VGSSIVPISAWETHQSEQIRGIRL-------SGTSIYSSAAVVWQSGRHLSKA 280 Query: 304 IVWLRETI 311 ET Sbjct: 281 ANRFIETF 288 >UniRef50_C1A9Z7 LysR family transcriptional regulator n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A9Z7_GEMAT Length = 296 Score = 210 bits (537), Expect = 4e-53, Method: Composition-based stats. Identities = 41/313 (13%), Positives = 101/313 (32%), Gaps = 22/313 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +D+ LL + + ++AA+RI + ++S + +L LF G++ T + Sbjct: 1 MDITLLRAFLEVADAGAFSRAARRIGIAQPSLSLQIQRLEQQLGTTLFERHGRGVALTDV 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKP-HHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + + + A + +L A +++ R+P A Sbjct: 61 GKGLYPRARRIVDDVRAAEEAVRREVAEGFGSITVGAIPTIAPYVLPAALERLQHRHPGA 120 Query: 127 TIKLRN-WDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + LR + +D + G +D+ + + + +VL S++ V + Sbjct: 121 RVVLREDYSAVLVDLLREGAIDVAIAALPYDFGT----------LPQDVLGSEMLLVAVP 170 Query: 186 KDHPALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 HPA + P +++ + ++ + M Sbjct: 171 ALHPAARAGKITVAQLQDAPTVTLDPVHCLGEQVAGFCDARQVNPSVVCRSAQLTTVFEM 230 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 + L+ P+ + + +V L LE LW + + + Sbjct: 231 V--GAGMGLSIVPQMAAAKHNTSRCAVVPL-------ADMALERDIIALWPRDRAPSKVA 281 Query: 305 VWLRETIKNLYAS 317 + + ++ + Sbjct: 282 MTFVDCVRQVVNG 294 >UniRef50_B7QWJ8 Transcriptional regulator, LysR family n=1 Tax=Ruegeria sp. R11 RepID=B7QWJ8_9RHOB Length = 320 Score = 210 bits (537), Expect = 4e-53, Method: Composition-based stats. Identities = 76/324 (23%), Positives = 133/324 (41%), Gaps = 26/324 (8%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 + TLDLNLL L + E S KA +R+ ++ SAVS +L++LR +DPLFV L Sbjct: 1 MNFATLDLNLLRVLDAVFAEGSTVKAGRRLGLSQSAVSGALSRLRHALNDPLFVRQGNQL 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQIY 120 T S+ +L + LL P H P F ++A +++ L + Sbjct: 61 VATEFAESLRHDLRAELDRLETLLSPPSHFDPATASGLFRISAADFFCDMLMPRLGDLLS 120 Query: 121 QRYPQATIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 ++ P +L + ++++ R + D+ + LP + E LF Sbjct: 121 RKAPGIRAQLLDLVPRHHVESLERQQADLALLPD----------TDLPDWMMREPLFRSE 170 Query: 180 PCVWLRKDHPAL-----HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMS 234 V R+ +PA + D F PH+ T D L ++GR R + M+ Sbjct: 171 YAVLARRGNPATKDLRHGERMPFDLFCSLPHVLFAPHGDLTAQSDEALAKVGRRRRVVMT 230 Query: 235 LPEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLW 294 +P F + ++ D + L + + ++ L L P+ D Q +W Sbjct: 231 VPVFSGVCRVVSESDLIGLLPL-QLARKVQPVYGLDLFVPPIAIDPIQLIG-------VW 282 Query: 295 HKRNSHNPKIVWLRETIKNLYASM 318 H++ P W+R+ I ++ + Sbjct: 283 HRKADTAPMAAWMRQQIFDILRPL 306 >UniRef50_A1WVW1 Transcriptional regulator, LysR family n=11 Tax=Proteobacteria RepID=A1WVW1_HALHL Length = 318 Score = 210 bits (536), Expect = 4e-53, Method: Composition-based stats. Identities = 48/314 (15%), Positives = 92/314 (29%), Gaps = 22/314 (7%) Query: 7 TLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTP 66 + L L + + + S T+AA+ + +T AVS + +L PLF + T Sbjct: 2 NITLRQLQVFESVARHLSFTRAAEELYLTQPAVSMQIKQLEQQVGLPLFEQIGKRIYLTE 61 Query: 67 LMVSMEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQIYQRYPQ 125 + + L D + L + L +R P Sbjct: 62 AGEEVRRYAQRISAELRELADGLEALRGLNSGRLRL-TVASTANYFATDLLAAFTRRQPG 120 Query: 126 ATIKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 T +L + + + I E+D+ GR + +P + Sbjct: 121 VTFQLEVTNREGVIRRIQDNEMDLAVMGRPPEGLDVAAEAFMPN----------PLVIIA 170 Query: 185 RKDHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 DHP L+ + A+ VL+E G + + E Sbjct: 171 APDHPLADGSPIPLERLQDELFVLREQGSGTRNAVQRVLEERGMNLRGGLEMSSNEAIKQ 230 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 L + + +L +L ++ + + LE + L+ +P Sbjct: 231 SVQAGLGLGVVSIHTVALEL-ELGRLRVLNV-------EGFPLERQWYLVHRSGKRLSPA 282 Query: 304 IVWLRETIKNLYAS 317 R+ I + Sbjct: 283 AEAFRQFILDEAHR 296 >UniRef50_C6C1H7 Transcriptional regulator, LysR family n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6C1H7_DESAD Length = 304 Score = 210 bits (536), Expect = 5e-53, Method: Composition-based stats. Identities = 37/314 (11%), Positives = 92/314 (29%), Gaps = 26/314 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L + +E +AA+R+++ S+ + L L + + T Sbjct: 1 MELRQLRYFIAVAEELHFGRAARRVHIAQPPFSQQIKGLEEEVGARLLERNSRKVRLTNE 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + + + ++ M +L + RYP Sbjct: 61 GRYFYKQALDIVAQAEEAAATVGRMAKGEYGNIKVGFMEIAMDSLLPEAVRSFSHRYPGV 120 Query: 127 TIKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 +++L + L+ I GE+D+GFS + LFS + + Sbjct: 121 SVRLSQFGASIQLERIHSGELDVGFSTVYLRAME---------GLSSVKLFSRKHVLAVP 171 Query: 186 KDHPA-LHQTWNLDTFLRYPHISICWEQ--SDTWALDNVLQELGRERTIAMSLPEFEQSL 242 +DH ++ +L R + ++ G + + + Sbjct: 172 EDHIFTAEKSVSLKEIARENLLMFPRSGQPDLYDSIMQAFTSRGLVPKVRQEISGLSGAS 231 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 + + + P + + + ++W+ + N Sbjct: 232 ALI--SSGMGVTFLPE---------NSRVARKGIAMVPISDDFPRMDIFMVWNSEDYSNT 280 Query: 303 KIVWLRETIKNLYA 316 V E + + ++ Sbjct: 281 AGV-FMEWVADYFS 293 >UniRef50_B0N992 Putative uncharacterized protein n=2 Tax=Clostridium RepID=B0N992_EUBSP Length = 335 Score = 210 bits (536), Expect = 5e-53, Method: Composition-based stats. Identities = 46/312 (14%), Positives = 95/312 (30%), Gaps = 22/312 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 + L L + + S+TKAA +++ +VS + +L ++ LF G++PT Sbjct: 1 MTLRHLNIFVSVYEYNSITKAADALHIAQPSVSLVIKELEEYYGIQLFDRIGRGITPTEA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQAT 127 + + + N + + + + A + +L L K+ + +P Sbjct: 61 GKELYSYAIHIVSLFNEMAQRIKNWDNV-GTLRIGASITIGTHILPGLIKEYQKDFPYLR 119 Query: 128 IKL-RNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRK 186 IK+ N I ++DIG + I + D C + Sbjct: 120 IKVTVNKSATIEQHILDNKIDIGLIENQPD----------HPEILSQPFMKDNLCAIVPN 169 Query: 187 DHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMA 245 + P + L+ P + + LD + + Sbjct: 170 EDPLSSKAYITLEELASRPFLMREKGSAGREILDACFSLKNIHVNPLWESSSTQAIVKGV 229 Query: 246 AQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIV 305 NL +A P + + + LP +++HK ++ Sbjct: 230 --SMNLGVAVLPYLLIK-RDIEEHNVNYLPFKTPL------TRNLNIIYHKSKYLTRNML 280 Query: 306 WLRETIKNLYAS 317 K + S Sbjct: 281 SFIGLCKKVGRS 292 >UniRef50_B4SSL0 Transcriptional regulator, LysR family n=8 Tax=Xanthomonadaceae RepID=B4SSL0_STRM5 Length = 322 Score = 210 bits (536), Expect = 5e-53, Method: Composition-based stats. Identities = 51/307 (16%), Positives = 106/307 (34%), Gaps = 23/307 (7%) Query: 10 LNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMV 69 L L ++ SV++AA+ + V+ A+S L L PLF S L P+ Sbjct: 18 LKPLRAFCQTVRLGSVSRAAEALFVSQPAISLQLQALERELGVPLFERSGRRLVPSREGQ 77 Query: 70 SMEQNLAEWMQMSNLLLDKPHH--QTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQAT 127 + + ++ + L + + + +AA S ++ +L + ++ +P Sbjct: 78 LLYEMAQPLVENLDGLEARFRDKVRGLDAGELNIAANSSTILYLLPKIVERFRLHHPDVR 137 Query: 128 IKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRK 186 + L N D D + D+ ++ +P + Y + + Sbjct: 138 LTLHNAISADGTDLLREDAADLAIGS----------MTDVPADLSYAPAYRFEQVLIAPH 187 Query: 187 DHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMA 245 DHP L RYP + Q +D V Q T+A+ + +E Sbjct: 188 DHPLASGGELELADIARYPLVLPPKRQITYRLVDQVFQRHRIAYTVALEVGGWEVIKQYV 247 Query: 246 AQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIV 305 A + ++ P C +L + ++ E + ++ + + + + Sbjct: 248 A--MGMGISIVPALCLNEADRERLAARS-------MKRWFPERSYGVIVRRGKALSAQAR 298 Query: 306 WLRETIK 312 E I+ Sbjct: 299 AFIELIQ 305 >UniRef50_Q3MEY8 Transcriptional regulator, LysR family n=1 Tax=Anabaena variabilis ATCC 29413 RepID=Q3MEY8_ANAVT Length = 295 Score = 210 bits (536), Expect = 5e-53, Method: Composition-based stats. Identities = 48/312 (15%), Positives = 104/312 (33%), Gaps = 26/312 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L L +E KAA+R+++ +S+ + +L LF + + T Sbjct: 1 MELRHLRYFVTLAEELHFGKAAERLHIAQPPLSQQIRQLEIELGFDLFHRTKRTVRLTEA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPH-HQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + +Q + + + S +L + + P Sbjct: 61 GQVFLGEVQQILQQLQQAIQLGQTSSRGEVGQLIVGFVSSAAYNILPIILRNFRACTPAV 120 Query: 127 TIKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 ++L D L+ + G +DIGF ++E +F + V L Sbjct: 121 KLELHEMTTDQQLEWLREGGIDIGFIRPPVEENI----------FNWETIFQESLMVALP 170 Query: 186 KDHPALHQ-TWNLDTFLRYPHISICW--EQSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 + H +Q L + I + ++ Q+ G +A + + ++ Sbjct: 171 ETHLLANQFNIPLTSLGNESFILFPRKIAPGLYDLIISLCQQAGFSPHVAQEAIQMQTTV 230 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 + A + +A P Q + + + Q+ +V + W K N +P Sbjct: 231 SLVAAD--MGIAIVPASLQNLQRTG--------VVYKNIQEATAKVALAMTWRK-NETSP 279 Query: 303 KIVWLRETIKNL 314 + T++ L Sbjct: 280 TLQRFLHTVRAL 291 >UniRef50_A5VFC0 Transcriptional regulator, LysR family n=2 Tax=Proteobacteria RepID=A5VFC0_SPHWW Length = 315 Score = 210 bits (536), Expect = 5e-53, Method: Composition-based stats. Identities = 48/324 (14%), Positives = 94/324 (29%), Gaps = 31/324 (9%) Query: 1 MKKSITT----LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFV 56 M +SI+ +DL L + E +AA+R+ ++ +SK + L LF Sbjct: 1 MPRSISQRNGSMDLRHLRYFLRVADEMHFGRAAQRLGISQPPLSKQIRALEDELGVKLFD 60 Query: 57 NSPLGLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPL-MMIMLNA 114 + + T E ++ ++ + L + + + Sbjct: 61 RTSRRVRLTEAGRLFEPEARRALEQADRAARIARLAHSAEIGRLGLGFTTSGPFIPFVAR 120 Query: 115 LSKQIYQRYPQATIKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYE 173 + + YP + LR D ++ + ++DIG LP + + Sbjct: 121 ALHRFRRTYPDVELILREQGRDEQIEGVLSRQLDIGIVRDYRT-------PVLPDGVVAQ 173 Query: 174 VLFSDVPCVWLRKDHPALHQ--TWNLDTFLRYPHISICW--EQSDTWALDNVLQELGRER 229 L + + +R DH + + P + T + +E G Sbjct: 174 CLQQEEMILAVRDDHWLARRPQPPRIADLRDEPLVLYGPPNGTGFTEHFFALCEEAGFVP 233 Query: 230 TIAMSLPEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVP 289 IA L + + + Q +LH +V Sbjct: 234 KIAHEARSLATLLGLVSAGFGPTI-----IAQSMARLHVDNVVNRSFAAPSPS------S 282 Query: 290 FTLLWHKRNSHNPKIVWLRETIKN 313 L+ +P R TI Sbjct: 283 LWLV--HGEELSPTGAAFRRTILE 304 >UniRef50_C1SLV8 Transcriptional regulator, LysR family n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SLV8_9BACT Length = 298 Score = 210 bits (536), Expect = 5e-53, Method: Composition-based stats. Identities = 43/314 (13%), Positives = 93/314 (29%), Gaps = 26/314 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +DL L Q + + +VT+AA+ +N+ ++SK+++ L LF + Sbjct: 1 MDLLQLKYFQTVAKFENVTRAAEELNIAQPSLSKTISNLEKDLGVSLFDRPGRRIRLNKF 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + + + + A + +L + + + Sbjct: 61 GTAFLKRVQNSFSELEQGQKELMDMAGLEQGNINIGAS---IARLLPKMFSEFLNHHGNV 117 Query: 127 TIKLRNW--DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 +L D + G +D+ S + LF + + + Sbjct: 118 RFRLIQVINHLDLQQRLINGRIDLCISILPVEENK----------VHCTPLFDEEIFLAV 167 Query: 185 RKDHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 H + NL P I + + DN QE A E Sbjct: 168 MPKHRLAGRENINLKEIADEPFIRYAADSALRLITDNFFQEAEIIPDTAFECTTPEVICS 227 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 + + +A P + L V+ ++ + L W + + + Sbjct: 228 LVQ--NGFGIALIPASWWNLTGMDALVKVS-------IRKPVCKRTIWLSWMENHYLSQA 278 Query: 304 IVWLRETIKNLYAS 317 +E + + YA+ Sbjct: 279 ADKFKEFVIDYYAA 292 >UniRef50_P25544 RuBisCO operon transcriptional regulator n=13 Tax=Proteobacteria RepID=RBCR_CHRVI Length = 302 Score = 210 bits (536), Expect = 5e-53, Method: Composition-based stats. Identities = 44/315 (13%), Positives = 91/315 (28%), Gaps = 22/315 (6%) Query: 7 TLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTP 66 + L L + + + S T+AA+ ++++ AVS + +L LF + T Sbjct: 2 HVSLRQLRVFEAVARHNSYTRAAEELHLSQPAVSMQVRQLEDEIGLSLFERLGKQVVLTE 61 Query: 67 LMVSMEQNLAEWMQMSNLLLDKPHHQTP-RGLKFELAAESPLMMIMLNALSKQIYQRYPQ 125 + Q + + +A S + L QR+ Sbjct: 62 AGREVFHYSRAIGQSLREMEEVLESLKGVSRGSLRIAVASTV-NYFAPRLMAIFQQRHSG 120 Query: 126 ATIKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 ++L + + + + VD+ G + ++ E + V Sbjct: 121 IGLRLDVTNRESLVQMLDSNSVDLVLMGVPPRN----------VEVEAEAFMDNPLVVIA 170 Query: 185 RKDHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 DHP + +L + A++ E G+ M + E Sbjct: 171 PPDHPLAGERAISLARLAEETFVMREEGSGTRQAMERFFSERGQTIRHGMQMTRNEAVKQ 230 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 L + + LV L + + L++ + +P Sbjct: 231 AVRSGLGLSVVSLHTIELELETR---RLVTLDVE-----GFPDRRQWYLVYRRGKRLSPA 282 Query: 304 IVWLRETIKNLYASM 318 RE + + A M Sbjct: 283 AGAFREFVLSEAARM 297 >UniRef50_A8TNA4 Transcriptional regulator MexT n=1 Tax=alpha proteobacterium BAL199 RepID=A8TNA4_9PROT Length = 299 Score = 210 bits (536), Expect = 5e-53, Method: Composition-based stats. Identities = 67/315 (21%), Positives = 114/315 (36%), Gaps = 24/315 (7%) Query: 7 TLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTP 66 LDLNLL L+M+ERS+T+AA+R++V AVS +LA+LR+ D LFV S + PT Sbjct: 2 NLDLNLLRVFALVMRERSLTRAARRLSVGQPAVSHALARLRSELGDALFVRSGRRMEPTE 61 Query: 67 LMVSMEQNLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQIYQRYP 124 S +A ++ + L P F + L M L +R P Sbjct: 62 WAKSFYAEIAPALERIDASLMSSRAFDPGSTDRTFRIGMSDDLQMAFLPQFLAAFTERMP 121 Query: 125 QATIKLRNWD-YDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVW 183 A + ++ + + + + R +V + L +LP A + + Sbjct: 122 NARLVVQQTNYTTAAEMLDRRDVSLVVGY----------LDTLPAAAKTRTISRVSYRMI 171 Query: 184 LRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 + + + L + H + + +D LQ+ G R I +SL F + Sbjct: 172 MDSRN---AEVTTLADYCAGKHALVTFAGDLIGYVDETLQQRGVARDIRLSLSNFAVVPY 228 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 L+ L + LP E ++ W +P Sbjct: 229 ALRGT-GYLVTIPQYLAAVLANETGLVMAQLPFESP-------EFDVSMAWSPTVDSDPG 280 Query: 304 IVWLRETIKNLYASM 318 +R+ I + Sbjct: 281 ERIIRDLIVDTVGGF 295 >UniRef50_A3TPW4 Putative transcriptional regulator n=1 Tax=Janibacter sp. HTCC2649 RepID=A3TPW4_9MICO Length = 292 Score = 210 bits (536), Expect = 6e-53, Method: Composition-based stats. Identities = 42/307 (13%), Positives = 92/307 (29%), Gaps = 26/307 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 + L L L L + R VT A + V+ +S++LA++ A LF P G+ TP Sbjct: 1 MQLRDLEWLVALAEHRHVTDTAAVLGVSQPTLSRALARIEADLGARLFERVPTGVVLTPH 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPH-HQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + + L P LA + ++ + ++ + P Sbjct: 61 GELVVTAARDLTARHDQLRADLAGRLDPDSGTVRLAFLDSMSTSLVPRVLREFHAHAPAV 120 Query: 127 TIKL-RNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + L + +D + G V++ + + L + + + Sbjct: 121 RVLLTQEPHHDITRDLDSGAVELAITSWLPPGP-----------FGWVPLQEERLVLVVP 169 Query: 186 KDHPA-LHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 +H + +L+ ++ +D++L G ++ + + Sbjct: 170 PNHRWKARRRISLEALADEDLVTTPHGFGYRTLIDDLLASAGVRPNVSFESADLATIEGL 229 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 + L +A P + +PL + L W P Sbjct: 230 VSA--GLGVAVLPAQFAGHTGTIGIPLAS----------SAARRTIGLTWRSDRDLAPPA 277 Query: 305 VWLRETI 311 + Sbjct: 278 ARFVAFV 284 >UniRef50_A3RSL5 Transcriptional regulators, LysR family n=4 Tax=Ralstonia solanacearum RepID=A3RSL5_RALSO Length = 304 Score = 210 bits (536), Expect = 6e-53, Method: Composition-based stats. Identities = 81/318 (25%), Positives = 127/318 (39%), Gaps = 24/318 (7%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 LDLNLL Q + Q R+VT AAKR N+T A+S +LA+LR F DPLFV SP G+ Sbjct: 1 MLSKRLDLNLLGVFQAIYQTRNVTLAAKRHNITQPAMSNALARLREVFADPLFVPSPYGM 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQIY 120 PTP + + ++ L P +F + + L AL +++ Sbjct: 61 RPTPYAQQLAVPIDRALREVEQALAMSKGFDPASSDREFRMHLTDFAQVAFLPALLERLR 120 Query: 121 QRYPQATIKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 P+ I++ + L A+ G +D F + + + LF D Sbjct: 121 ALAPRVVIRVEALAEETILPALDEGRLDFAFGR---------MSKAAGQGVGRYTLFKDR 171 Query: 180 PCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFE 239 V +R HP + F IC S A+++VL ++G IA+ LP F Sbjct: 172 YAVLMRAGHPLAGHALSRKDFAAAGQALIC--TSGHRAIEDVLVKMGA--HIALRLPSFL 227 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 + D L++ R + ALP+ +L W + S Sbjct: 228 VVSRIVETSD-LMVIVPARLAEQCAATGLFHTAALPVAMPA-------FDVSLFWSESRS 279 Query: 300 HNPKIVWLRETIKNLYAS 317 +P W+R ++ L+ Sbjct: 280 ADPAHAWMRGQLQQLFGQ 297 >UniRef50_D2C014 Transcriptional regulator, LysR family n=1 Tax=Dickeya dadantii Ech586 RepID=D2C014_DICD5 Length = 303 Score = 210 bits (536), Expect = 6e-53, Method: Composition-based stats. Identities = 69/298 (23%), Positives = 119/298 (39%), Gaps = 25/298 (8%) Query: 23 RSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFV--NSPLGLSPTPLMVSMEQNLAEWMQ 80 +++T AA R+ ++ A+S L++LRA F D LF+ G+ PTP S+ +A + Sbjct: 22 QNITHAAARLGISQPAMSARLSRLRATFGDQLFIPSPHGRGVLPTPRAESLRPQIASVLH 81 Query: 81 MSNLLLDKP-HHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQATIKL-RNWDYDSL 138 + +L+ F +A +++ L Q + P ++ Sbjct: 82 DISAMLEPIHFDAASSSRTFVIALHENPALMLGADLVNQFSEAAPGIRLRFALPESARLP 141 Query: 139 DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPALHQTWNLD 198 + + G++DI + + A LF D RK HP +L Sbjct: 142 EQLETGDIDIYIG----------VNAGAHDAWIRRKLFDDEFATAQRKGHPRGSAPLDLK 191 Query: 199 TFLRYPHISICW-EQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQPDNLLLATAP 257 ++ PH+ + T +D L LG +R++ MS + + + A D LL Sbjct: 192 SYCALPHLVVSSEGDPFTGFVDQTLAGLGYQRSVVMSTQSYAMAPPIVAGTD-LLCTLPR 250 Query: 258 RYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWLRETIKNLY 315 R Q + Q L + PLP + ++ WH +NSH+P VWLR + Sbjct: 251 RMLQRFTQT--LDIFDPPLPL-------QPIVISMYWHPKNSHDPANVWLRAQLLCAA 299 >UniRef50_C1ZI46 Transcriptional regulator, COG0583 n=1 Tax=Planctomyces limnophilus DSM 3776 RepID=C1ZI46_PLALI Length = 292 Score = 210 bits (536), Expect = 6e-53, Method: Composition-based stats. Identities = 39/308 (12%), Positives = 99/308 (32%), Gaps = 22/308 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L+ L + +S T AA ++ ++S+ + KL PLF S G+ T Sbjct: 1 MELHQLRYFLKAAELKSFTLAAAECFISQPSLSQQIIKLEQELGQPLFERSGRGVELTES 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQAT 127 ++ + + + + + + + A + +L + + + P+ T Sbjct: 61 GKLLQSRAGQIVSLVDQARREITD-DGETGQLTIGAIPTIAPYLLPQIVSRFREVVPRVT 119 Query: 128 IKLRN-WDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRK 186 +K+ L + GE D+ + ++ E LF + + + Sbjct: 120 LKIHEDVTEQCLKKVQAGEWDLAIAALPVRIE----------HLEVEPLFDEELWLAVPP 169 Query: 187 DHPALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMA 245 H H ++ R + + T + + L + + + Sbjct: 170 GHRLSHLTEVPVEEIDRETLLLLGEAHCLTEHVAQYCRRKDMAPLETGRLAQLTTIMELV 229 Query: 246 AQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIV 305 ++ P C+ +++ + L Q + + L+W+ + Sbjct: 230 --SRGQGVSFIPNMCKAFDREGRCAYRPL-------QGDRPQRTIALVWNSYRFQTLLLK 280 Query: 306 WLRETIKN 313 + I+ Sbjct: 281 RALDVIRR 288 >UniRef50_A0LNI4 Transcriptional regulator, LysR family n=4 Tax=Deltaproteobacteria RepID=A0LNI4_SYNFM Length = 302 Score = 210 bits (535), Expect = 6e-53, Method: Composition-based stats. Identities = 55/311 (17%), Positives = 103/311 (33%), Gaps = 24/311 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +D++ L+ +++ S TKAA+ + +T VS+ + L + L + PTP Sbjct: 1 MDIHRLVVFCRVLEMGSFTKAAEAVCLTQPTVSEHVRALEETLGEKLIDRLGREVLPTPA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTP-RGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + Q + +Q+ + + + A + +L L + YP Sbjct: 61 GKILYQYARDIIQLRDEAVQALEKFKGNLSGALLIGASTIPGTYVLPELIGSFKKSYPAI 120 Query: 127 TIKLR-NWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 I LR + + G V+ G G R I E FSD + + Sbjct: 121 QITLRITDSAEVVARTIDGGVEFGVIGARLEDR----------RIVLEEAFSDELVLAVF 170 Query: 186 KDHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRER---TIAMSLPEFEQS 241 +DHP ++ +L+ P I ++ L+ G I + E Sbjct: 171 RDHPWAVRKSVSLEELAGEPFILRERGSGTRIVMNQALEAHGFSPTKLNIVAEMGSTEAI 230 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 + ++ + H L A+PL + PF L+ K + Sbjct: 231 RQGIKA--GIGISILSHRAVAEDLRHG-SLFAVPLA-----GIRFSRPFFLVQRKNRQMS 282 Query: 302 PKIVWLRETIK 312 P ++ Sbjct: 283 PLCSAFLNHLR 293 >UniRef50_O68014 HTH-type transcriptional regulator benM n=12 Tax=Acinetobacter RepID=BENM_ACIAD Length = 304 Score = 210 bits (535), Expect = 6e-53, Method: Composition-based stats. Identities = 47/296 (15%), Positives = 102/296 (34%), Gaps = 20/296 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L +++E+S TKAA ++ + +S+ + L L + TP Sbjct: 1 MELRHLRYFVAVVEEQSFTKAADKLCIAQPPLSRQIQNLEEELGIQLLERGSRPVKTTPE 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQAT 127 Q + + + ++ + L+ +L + Q +P Sbjct: 61 GHFFYQYAIKLLSNVDQMVSMTKRIASVEKTIRIGFVGSLLFGLLPRIIHLYRQAHPNLR 120 Query: 128 IKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRK 186 I+L +A+ G +D GF L AI +L ++ V + Sbjct: 121 IELYEMGTKAQTEALKEGRIDAGFGR----------LKISDPAIKRTLLRNERLMVAVHA 170 Query: 187 DHPALH---QTWNLDTFLRYPHISI--CWEQSDTWALDNVLQELGRERTIAMSLPEFEQS 241 HP + +L+ + + + + + + N+ + G E T + E + + Sbjct: 171 SHPLNQMKDKGVHLNDLIDEKILLYPSSPKPNFSTHVMNIFSDHGLEPTKINEVREVQLA 230 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVAL----PLPFDESQQKKLEVPFTLL 293 L + A + + L A L +PL+ P+ ++ ++L Sbjct: 231 LGLVAAGEGISLVPASTQSIQLFNLSYVPLLDPDAITPIYIAVRNMEESTYIYSLY 286 >UniRef50_B1Z4Z1 Transcriptional regulator, LysR family n=5 Tax=Proteobacteria RepID=B1Z4Z1_BURA4 Length = 313 Score = 210 bits (535), Expect = 6e-53, Method: Composition-based stats. Identities = 51/311 (16%), Positives = 105/311 (33%), Gaps = 22/311 (7%) Query: 7 TLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTP 66 DL L + +++ S KAA I+++ A+S+ + KL LF + ++ T Sbjct: 4 NFDLTDLQAFRAVVELGSFRKAADAISISQPALSRRIDKLEEALGVRLFERTTRSVTLTT 63 Query: 67 LMVSMEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNALSKQIYQRYPQ 125 + + + + ++ L + +A + L + ++R+P+ Sbjct: 64 VGRVFAPSAEQLLDDLDVALLGIRDVSSSRLGHVTIACVPSVAYYFLPNVIASYHRRFPR 123 Query: 126 ATIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 +KL + + L A+ GE D G S + S ID+++L + Sbjct: 124 IRVKLLDAGANEVLSAVISGEADFGVSF----------MGSQEPEIDFKLLLQERFVAAC 173 Query: 185 RKDHPALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 R+DHP + + Y ++S+ + LD L + L Sbjct: 174 RRDHPLARKKRVTWNELYEYEYVSVDKTSGNRLLLDQALTTVAPRAPSVCETRHVTTLLG 233 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 + L +A P + L V L + ++ ++ + P Sbjct: 234 LIEA--GLGVAAVPSMAMPGHDHPLLTSVPL-------VEPVVKRRVGIVKRRGRPLTPA 284 Query: 304 IVWLRETIKNL 314 I + Sbjct: 285 AEEFHRAIVDA 295 >UniRef50_A6GJJ5 Regulatory protein, LysR:LysR, substrate-binding n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GJJ5_9DELT Length = 304 Score = 210 bits (535), Expect = 6e-53, Method: Composition-based stats. Identities = 68/304 (22%), Positives = 127/304 (41%), Gaps = 21/304 (6%) Query: 19 LMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSMEQNLAEW 78 L++E +VT+AA+ + ++ A+S LA+LR FDDPL + S G+ PT + + + +A Sbjct: 2 LVREGNVTRAARALGISQPAMSHRLARLRERFDDPLLLPSGAGMQPTARALQLVEPVARG 61 Query: 79 MQMSNLLLDKPHHQTP--RGLKFELAAESPLMMIMLNALSKQIYQRYPQATIKLRNWDYD 136 + + L P +F +A ++L +++ P+ +++ + Sbjct: 62 LLEFDAALRSEARFDPRTSTRRFTIACADFGDFVVLPRALSRLHAEAPEIEVRMCRPGPE 121 Query: 137 SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPALHQTWN 196 + RG +D+ G P + + +R DHPA+ + Sbjct: 122 LERGLERGLIDVAVLGNPCLPAA---------NFRQRRVLDGRFATTVRADHPAVGPRMD 172 Query: 197 LDTFLRYPH--ISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQPDNLLLA 254 LDTF+ PH I+ E +D+ L +G R +A+ +P + + +A++ D +L A Sbjct: 173 LDTFVALPHLAIAPSSESDFGGVIDDALARVGEARRVAVRVPSYSTAPLLASRSDLVLTA 232 Query: 255 TAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWLRETIKNL 314 L + PLP ++WH+R P WLR T+ + Sbjct: 233 PV-GVILEAASFVSLRVFDPPLPIP-------PSDVRMVWHERWQREPGHAWLRTTLAEV 284 Query: 315 YASM 318 + Sbjct: 285 MTGL 288 >UniRef50_A9FJR3 Transcriptional regulator, LysR family n=2 Tax=Sorangium cellulosum 'So ce 56' RepID=A9FJR3_SORC5 Length = 306 Score = 210 bits (535), Expect = 7e-53, Method: Composition-based stats. Identities = 63/317 (19%), Positives = 132/317 (41%), Gaps = 20/317 (6%) Query: 4 SITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLS 63 + +DLNLL L ++ ER+VT+AA+R+ +T AVS +L +LR F+D L V ++ Sbjct: 8 RLRAVDLNLLTVLDAVLTERNVTRAAERLGMTQPAVSSALNRLRLLFNDDLIVRRGKEMA 67 Query: 64 PTPLMVSMEQNLAEWMQMSNLLLDKPHHQT-PRGLKFELAAESPLMMIMLNALSKQIYQR 122 PTP +++ + + + + L F L ++L + + Q Sbjct: 68 PTPRALALAGPIRKALDLIQASLAHTGAFDCTASRTFRLGITDIGEALLLPRFLQWLEQL 127 Query: 123 YPQATIKL-RNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPC 181 + + R + + G++++ + ++ + Sbjct: 128 GARVRLDFCREPGTSLQNEMRLGKIELVL----------DHIAIPGEEFRRTRVLDLEFV 177 Query: 182 VWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQS 241 +R+DHP + + LD ++ H+ I + T + + +GR R + + +P + Sbjct: 178 TLVRQDHPTVGPSLTLDEYMALEHVIIEPREGQTNLAEQIQAAVGRARCVRVQVPRYLSM 237 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 F+ +Q + + P + + Q + +V+ PLP +P ++WH + Sbjct: 238 PFIVSQSNLVCTLPLP-LARLFEQHFPVRVVSCPLPI-------QPIPLFMMWHACQDGD 289 Query: 302 PKIVWLRETIKNLYASM 318 P WLR ++ L + + Sbjct: 290 PAHEWLRRSLIELCSRV 306 >UniRef50_A3UQR4 Transcriptional regulator, LysR family n=1 Tax=Vibrio splendidus 12B01 RepID=A3UQR4_VIBSP Length = 301 Score = 210 bits (535), Expect = 7e-53, Method: Composition-based stats. Identities = 38/254 (14%), Positives = 82/254 (32%), Gaps = 16/254 (6%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 S+ ++ L L +E + +AA+++N+ A+S+SL KL + LF+ + + Sbjct: 1 MSL-NYEIRHLKHFFALAEELNFRRAAEKLNIAQPALSRSLQKLESDLGVILFIRTTRLV 59 Query: 63 SPTPLMVSMEQNLAEW-MQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQ 121 T + + + + + + + + + L L K Sbjct: 60 ELTDAGKAFHAGAHQAFLSLIDAEKSAMRVKIGEEGSLRIGYTNFAITGQLPQLLKAFKD 119 Query: 122 RYPQATIKL-RNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 YP ++L + D ++++ + +D GF + I D Sbjct: 120 SYPLIRLELIHQFSADQIESLEKERLDFGFITGPL----------IYKGISSFPFQQDPL 169 Query: 181 CVWLRKDHPALHQT-WNLDTFLRYPHISICWEQSDT--WALDNVLQELGRERTIAMSLPE 237 + HP H+ +L I + V + G I + Sbjct: 170 VAIVPDSHPLSHKPSIDLIDLRHESFILGNANNWTHFFKIIQRVCRNAGFMPNIVEEAYD 229 Query: 238 FEQSLFMAAQPDNL 251 E L + + + Sbjct: 230 TEAILGLVSSGFGI 243 >UniRef50_B7VJC4 Putative LysR-like regular protein n=4 Tax=Vibrionales RepID=B7VJC4_VIBSL Length = 308 Score = 210 bits (535), Expect = 7e-53, Method: Composition-based stats. Identities = 67/318 (21%), Positives = 118/318 (37%), Gaps = 20/318 (6%) Query: 4 SITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLS 63 + +DLNLL+ LQ L + SV+KAA+R V+ SA+S SL +LR FDDPLF + Sbjct: 5 NWKGIDLNLLIALQALYKTNSVSKAAERCYVSQSAMSHSLQRLRKLFDDPLFERVGSKME 64 Query: 64 PTPLMVSMEQNLAEWMQMSNL--LLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQ 121 T + + + + LL K +++ + AL I Q Sbjct: 65 ATDRAIELSSTVEALLNTIQSEVLLSKSFDAATYKGTWKIGLTDYAEQMFAPALFDLIKQ 124 Query: 122 RYPQATIKLRNWDYDSLDAI-TRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 P + + L N + + + ++D+ + L+++ Sbjct: 125 SSPNSQVVLFNVNRSNYQQVFEDAKLDMAIGS----------FGEVSKQYRTTHLYTEQH 174 Query: 181 CVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQ 240 K ++ +L+ F+ H + S +D L ELG R +A+ F Sbjct: 175 VCLFDKSVVSIEGPISLEQFVAVEHALVSPAGSLKTGVDKRLAELGFSRKVAICSSNFLT 234 Query: 241 SLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 + + L P+ + Q +VA+ P D L++ K Sbjct: 235 VKRLIRGRELL--CIVPKLVARNDIQDQDTVVAVEPPIDVPD-----FDIQLIYRKTKHL 287 Query: 301 NPKIVWLRETIKNLYASM 318 + K LR+ +S+ Sbjct: 288 DDKNKLLRKLFTQAVSSV 305 >UniRef50_C3AN59 Transcriptional regulator, LysR n=4 Tax=Bacilli RepID=C3AN59_BACMY Length = 314 Score = 210 bits (535), Expect = 7e-53, Method: Composition-based stats. Identities = 36/309 (11%), Positives = 97/309 (31%), Gaps = 26/309 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +D+ L ++ +ER +T+AA R+++ +S+ L+ L LF + + T Sbjct: 25 MDIRQLRYFIVIAEERQLTRAAHRLHMAQPPLSRQLSLLEQELSVSLFERNGRNMHLTEE 84 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHH-QTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + +Q + + + A + L+ + + YP Sbjct: 85 GKILYRKAKSIIQQLEETITEIKDTGEGLRGNLSIGAFHSCIP-FLSEKIRYFQENYPNV 143 Query: 127 TIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 +K+ ++ + +++ + ++ + + + + Sbjct: 144 NLKVWEGGPLYLIEQLENRNIELAVLRTPFNKKAFSSICVS----------KEPFVLVMP 193 Query: 186 KDHPALHQ--TWNLDTFLRYPHISICWE--QSDTWALDNVLQELGRERTIAMSLPEFEQS 241 H ++ P + + + S + + G + IA P+ Sbjct: 194 AKWELHHSNLPISITKLDHIPLLLLHKDKEDSYHQLVIDECSRHGIKLNIACECPDSAFV 253 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 L + + + P+ Y + +V L + F + +++W K + Sbjct: 254 LMLIMA--GIGASILPKSAVSYIPQEFIRIVDL-IDFPFQSES------SIIWLKDRKLS 304 Query: 302 PKIVWLRET 310 E Sbjct: 305 NSARRFIEC 313 >UniRef50_B2T3Y4 Transcriptional regulator, LysR family n=3 Tax=Burkholderiales RepID=B2T3Y4_BURPP Length = 321 Score = 210 bits (535), Expect = 7e-53, Method: Composition-based stats. Identities = 70/313 (22%), Positives = 122/313 (38%), Gaps = 23/313 (7%) Query: 9 DLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLM 68 DLNLL L L+ E++VT+AA+ ++++ SA+S++L +LRA DPL V + + TP Sbjct: 24 DLNLLFALDALLTEKNVTRAARSLHLSASAMSRTLTRLRAATGDPLLVRAGRNMVLTPHA 83 Query: 69 VSMEQNLAEWMQMSNLLL---DKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQ 125 + + + + LLL + + A + L ++ P Sbjct: 84 EEIREQTHNIVLEARLLLCPSSAAADFSTLSRTLRIRANEAFVEAFGAPLIAEVTAVAPL 143 Query: 126 ATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + + S + + G D+ +L + I LF D +R Sbjct: 144 VRLHFSSKAEKSAEYLRNGSADLEIG----------VLEEMGPEIRVRALFRDRYVGVVR 193 Query: 186 KDHPA-LHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 K HP Q + + + H+ + ALD + G ERT +P F +L + Sbjct: 194 KGHPLETEQDVTIARYAAFGHVVAPHGRQIIDALDAAIALQGLERTTVAVVPSFPAALAV 253 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 A D L+A P Q L LP+ + + +WH R ++P Sbjct: 254 AQASD--LVALLPASFANAQQSESLHSFELPVA-------TEGLTISQMWHPRLENDPVH 304 Query: 305 VWLRETIKNLYAS 317 W R+ + ++ Sbjct: 305 RWFRQLVLDVCRR 317 >UniRef50_A0QTM3 HTH-type transcriptional regulator AlsR n=7 Tax=Actinomycetales RepID=A0QTM3_MYCS2 Length = 304 Score = 210 bits (535), Expect = 7e-53, Method: Composition-based stats. Identities = 35/289 (12%), Positives = 84/289 (29%), Gaps = 16/289 (5%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L + + +E +AA+R+++ +S+ + +L L + + TP Sbjct: 1 MELRHLRYFRAVGEELHFGRAAERLHMAQPPLSQQIRQLERELGCTLLTRTTRSVELTPA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + E + + + + + +L L + + + P Sbjct: 61 GHTYLRRAVEILDAVDAANTEAQRIASGIQGRIAIGCVGSATYSLLPQLVRALGESLPGI 120 Query: 127 TIKLRN--WDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 + +R ++A+ G +D+ + + D V L Sbjct: 121 EVTVRGEMLAPAQIEALLSGGIDLALLRPPVRQEAVL----------THTVRRDGLVVAL 170 Query: 185 RKDHPAL-HQTWNLDTFLRYPHISICWEQS--DTWALDNVLQELGRERTIAMSLPEFEQS 241 DH + + + + V + G I + E Sbjct: 171 PADHALAIRDAVTVADLRDEDFVVHTGHGRSVMSNLVATVCADAGFLPRIRQEVSETSTL 230 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPF 290 + + A + + P + +PL L D + P Sbjct: 231 VTLVAAGLGVAIVPDPTTALDIAGVRYVPLRPTDLGVDLVAAHTGDSPL 279 >UniRef50_C7I2X4 Transcriptional regulator, LysR family n=1 Tax=Thiomonas intermedia K12 RepID=C7I2X4_THIIN Length = 313 Score = 210 bits (535), Expect = 7e-53, Method: Composition-based stats. Identities = 45/313 (14%), Positives = 95/313 (30%), Gaps = 28/313 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +DL L + +ER T+AA+R++V+ +S+ + L PLF G+ T Sbjct: 1 MDLRHLRYFVAVAEERHFTRAAQRLHVSQPPLSQQIQALETELGVPLFTRGRGGVQRTAA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQ-TPRGLKFELAAESPL-MMIMLNALSKQIYQRYPQ 125 ++ + + + + + + ++ L + +PQ Sbjct: 61 GDALLPLARSILDAVEHAVAQTRQVGRGETGRLAVGFAGSMPFTDVMPRLLRDFRAAWPQ 120 Query: 126 ATIKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 + LR +D + +D+GF + V+ + L Sbjct: 121 VALDLREQPSQSQIDDLLAHRLDLGFIRTTQL--------MHDPRLSTLVVQREPLLAAL 172 Query: 185 RKDHPALHQ-TWNLDTFLRYPHISICW--EQSDTWALDNVLQELGRERTIAMSLPEFEQS 241 DHP + + L+ P + + + G IA + E Sbjct: 173 HADHPLAARASLRLNDLRDQPFVIYSASLGAGLRQQTLALCAQAGFNPHIAQEVHEMPTL 232 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 + + + + + + + PL + L+W + + Sbjct: 233 IGLISAGLGVGIV-----AASMQRAQLPWVAYRPLA-----DVQASTEVLLVWRRDDPQP 282 Query: 302 PKIVWLRETIKNL 314 P LR I Sbjct: 283 P----LRNFIAQA 291 >UniRef50_A6SUU1 OxyR hydrogen peroxide-inducible genes activator n=125 Tax=cellular organisms RepID=A6SUU1_JANMA Length = 331 Score = 210 bits (535), Expect = 8e-53, Method: Composition-based stats. Identities = 52/317 (16%), Positives = 102/317 (32%), Gaps = 30/317 (9%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 + L L + + +E+ AA+ V +S ++ KL LF +S TPL Sbjct: 17 MTLTELKYIVAVAREKHFGHAAEACFVAQPTLSVAIKKLEDELGVTLFERGGSEISMTPL 76 Query: 68 MVSMEQNLAEWMQMSNLLLD-KPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + ++ + + + ++ P F L + +L L K I +R PQ Sbjct: 77 GAQIVAQAERVLEQTAAIKEIAKQNKDPLVGPFRLGIIYTIAPYLLPPLVKTIIERVPQM 136 Query: 127 TIKLRN-WDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + L+ + L+ + +GE+D L + + ++ + V + Sbjct: 137 PLVLQENFTVKLLELLRQGELDAAIVA----------LPFPDQGLLVQPVYDEPFVVAVP 186 Query: 186 KDHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQEL--------GRERTIAMSLP 236 K H + + D + + + V E+ G RT Sbjct: 187 KHHKWANRDSVSTDDLKSETMLLLGNGHCFRDQVLEVCPEMSRFSTSGDGIART--FEGS 244 Query: 237 EFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHK 296 E M A + + P+ Q L +P L+W K Sbjct: 245 SLETIRHMVAS--GIGITVLPQASIPDMQAKDGMLRYIPFTQP-----GPSRRVVLVWRK 297 Query: 297 RNSHNPKIVWLRETIKN 313 + I +R+ + + Sbjct: 298 SFTRGAAIEAVRQALLS 314 >UniRef50_Q46T42 Regulatory protein, LysR:LysR, substrate-binding n=2 Tax=Burkholderiaceae RepID=Q46T42_RALEJ Length = 330 Score = 209 bits (534), Expect = 8e-53, Method: Composition-based stats. Identities = 63/318 (19%), Positives = 123/318 (38%), Gaps = 20/318 (6%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 D NLL +++ERSVT+AA ++ +T SA+S +L +LR +FDDPLFV + G+ Sbjct: 1 MHTDAFDYNLLTVFDAMLRERSVTRAAAQLGLTQSAMSHALNRLREFFDDPLFVKTAAGM 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPR--GLKFELAAESPLMMIMLNALSKQIY 120 +PT ++ + + + M + P F L ++ L L K++ Sbjct: 61 TPTIKAEALSETVLDVMTAMRTRVLPQASFDPATMQRTFTLCMTDMGELVFLPPLMKRLR 120 Query: 121 QRYPQATIKLRNWDYDSLD-AITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 P ++ ++ + G+ D+ + + P ++ + LF Sbjct: 121 VVAPHCKLRTLQVPVPQIEGLLASGDADLLLGS----------VQTAPESLFRQQLFMHG 170 Query: 180 PCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFE 239 + + + ++ F PH+++ + + D + G R I + P F Sbjct: 171 FVTIVSTKNRQVRDALTIEQFESMPHVTVSLAGRTSPSYDAAFESHGLRRNIYLHTPHFL 230 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 + Q L+ +++ + + + WH R Sbjct: 231 SIPLLMEQQPELIATVPQELANVFSRYGIVR-------VVKPPVVLPPYALSQYWHPRFH 283 Query: 300 HNPKIVWLRETIKNLYAS 317 H+P IVWLR+ +K + Sbjct: 284 HDPAIVWLRQLVKQTFDR 301 >UniRef50_Q2SKI3 Transcriptional regulator n=3 Tax=Oceanospirillales RepID=Q2SKI3_HAHCH Length = 296 Score = 209 bits (534), Expect = 8e-53, Method: Composition-based stats. Identities = 62/318 (19%), Positives = 124/318 (38%), Gaps = 26/318 (8%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 I L+++ L L L + ++T AA+ ++++ A+S+ L KLR D LFV + G++P Sbjct: 2 IEKLEIHHLRTLDALYRFGNITAAAESLDLSQQAISQQLKKLRGILSDQLFVRTGHGVAP 61 Query: 65 TPLMVSMEQNLAEWMQMSNLL-LDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRY 123 TP +E ++ + + + L + ++A +++ L ++ + Sbjct: 62 TPYAKQIEPHIQRVLAHLHAIPLPEAFSLAKMERTLVISATDYTQKVIVTGLVAELRKAA 121 Query: 124 PQATIKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCV 182 P+ + + N + SL + +GE+D+ F+ +P + E LF++ Sbjct: 122 PRVKVVVANIESASLTRKMRQGEIDLAFTSH----------GYVPEGLLSEPLFTERYLC 171 Query: 183 WLRKDHPALHQTWNLDTFLRYPHISICWE-QSDTWALDNVLQELGRERTIAMSLPEFEQS 241 A +LD + I + D ++ G R + +S P F + Sbjct: 172 VSADAGLAGQGEISLDQLVARDFIVTSPGVGGFAGSADAWFEQQGLRRNVTISAPSFHIA 231 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 D +A P L ++PL P +H + Sbjct: 232 QEYLKATDM--VAFVPSRLLPCEGLFEIPLKKYP----------PGYEVVAAYHPSAKDD 279 Query: 302 PKIVWLRETIKNLYASMA 319 P I+W + ++ AS+A Sbjct: 280 PLIMWALKAVQQ-CASLA 296 >UniRef50_C8VWS6 Transcriptional regulator, LysR family n=1 Tax=Desulfotomaculum acetoxidans DSM 771 RepID=C8VWS6_DESAS Length = 300 Score = 209 bits (534), Expect = 8e-53, Method: Composition-based stats. Identities = 45/313 (14%), Positives = 96/313 (30%), Gaps = 24/313 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++ N L +++ S++KAAK +N+T AVSK +A L F L + PT Sbjct: 1 MNFNFLQTFVTVIEFNSISKAAKALNITQPAVSKQIASLEDHFGIKLLERLGRKMVPTEA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHH-QTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + ++ + + + + + A + +L + ++YPQ Sbjct: 61 GNRLNRHAKIILNSLQQAEKEINEMISEVRGNLVIGASTIPGQYILPKIIGLFKKQYPQV 120 Query: 127 TIKLR-NWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 L + ++ + E+ +G L I L D + Sbjct: 121 KTVLEISDSGKVIEKLLEHEIHLG----------AIGTKVLHDKIASIKLSDDELVLITP 170 Query: 186 KDHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERT---IAMSLPEFEQS 241 +HP +T + + A++ L G I E Sbjct: 171 LEHPFATRKTVKAVELAGEQMVWRESDSGTRHAVEEKLTAKGLNVNNLIITAEFGSTESI 230 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 + + ++ + N+ + + + L+ +++ KR N Sbjct: 231 IGAVEA--GMGISFVSHWAVPENEYRR------NIAVLRLEDIVLDRNLYIIYPKRKYFN 282 Query: 302 PKIVWLRETIKNL 314 + L Sbjct: 283 RTAETFINFLHQL 295 >UniRef50_Q4KE95 Transcriptional regulator, LysR family n=7 Tax=Pseudomonas RepID=Q4KE95_PSEF5 Length = 303 Score = 209 bits (534), Expect = 8e-53, Method: Composition-based stats. Identities = 52/309 (16%), Positives = 103/309 (33%), Gaps = 21/309 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +DL L + + + +AA+++N + A++KS+ +L F LF G+ T + Sbjct: 1 MDLRDLTYFDTIAELGHLGRAAQKLNRSQPALTKSIQRLEESFGTKLFEREGRGIKLTAV 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNALSKQIYQRYPQA 126 +++ + Q + L + + +L ++ + +R P Sbjct: 61 GELLQRRSRQLQQNIAETHREVRDFASGVLGNIRLGCAASMAEHLLPQMTATLLERAPDI 120 Query: 127 TIKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 T+ L D L +++ G +D+ + + LF D V Sbjct: 121 TLNLVIGQDDLLRESLRSGRLDMVICPMFEGDP----------HLSHHTLFEDRAVVVAS 170 Query: 186 KDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRE-RTIAMSLPEFEQSLFM 244 +DHP L Y + S +DNV Q ++ + + Sbjct: 171 RDHPIFATPMRLRDLCAYRWVLPGTRVSARRWIDNVFQSHELPLPSVQIETNTISLLPRL 230 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 A+ LL A + + L V L Q + +L +P Sbjct: 231 IAKT-GLLSFLARETLDDFKGIAHLREVPL-------AQTCMRRSIVVLVRAEGYLSPAA 282 Query: 305 VWLRETIKN 313 L + +K+ Sbjct: 283 QALLDLLKS 291 >UniRef50_Q67KY5 LysR family transcriptional regulator n=1 Tax=Symbiobacterium thermophilum RepID=Q67KY5_SYMTH Length = 298 Score = 209 bits (534), Expect = 9e-53, Method: Composition-based stats. Identities = 64/308 (20%), Positives = 114/308 (37%), Gaps = 22/308 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 + L+ L +++ RS +KAA R ++ AVS+ + + F L SP G+ PT Sbjct: 1 MLLSYLRVYCDIIETRSFSKAAARNFISQPAVSQQVKAMEEHFQQRLIERSPQGIYPTEA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + E ++ L + + + +A + + L K+ Q YPQA Sbjct: 61 GRIFYEAAREIVERYQALEQQMANLSQSVSGTIRVATVYTVGLHDLPPYIKKFIQTYPQA 120 Query: 127 TIKLR-NWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 I L + +A+ + +VDIG R ++ L SD V + Sbjct: 121 RIHLEYSRTNKIYEAVRQNQVDIGIVAYPQEGRQLGVIP----------LPSDELVVIVS 170 Query: 186 KDHPALH--QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 +HP + L R P I+ + A D VL + G + I E Sbjct: 171 PNHPLARAGKPVALQQLHRLPFIAFDPDIPTRKATDRVLNDHGVDVEIIHEFDNVETIKR 230 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 L ++ PR C + LVALP+ ++E P +++ + + + Sbjct: 231 SVEAE--LGVSIIPRRCAQWEVRSG-SLVALPIA-----DMRIERPVGVIYKRGKNFSNT 282 Query: 304 IVWLRETI 311 + + Sbjct: 283 LQKFIAIL 290 >UniRef50_A6W028 Transcriptional regulator, LysR family n=1 Tax=Marinomonas sp. MWYL1 RepID=A6W028_MARMS Length = 309 Score = 209 bits (534), Expect = 9e-53, Method: Composition-based stats. Identities = 58/317 (18%), Positives = 126/317 (39%), Gaps = 22/317 (6%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 LDLNLL+ L L+ E+S+TK A+++N++PSA+S SL++LR +F+D L + Sbjct: 1 MRFKKLDLNLLVALDTLLTEQSITKGAEKLNMSPSALSNSLSRLRDYFEDDLLTQIGRRM 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNL--LLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIY 120 TPL +++ ++ + L+ F + +++ + + Sbjct: 61 VITPLGENLKVSVRNALNNIESTILVQPSFEPQTTDRIFSIFCSDYTQTVLVPHALEIVG 120 Query: 121 QRYPQATIKLR-NWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 ++ A +L + + + +G+ D+ S + + P I L+ + Sbjct: 121 KQKSTARFQLLAQVANNPHEQLEQGKADLLII------PSDFMSTEHPCDI----LYEEE 170 Query: 180 PCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVL-QELGRERTIAMSLPEF 238 + K + + H+ + E + + Q+ G +R + + F Sbjct: 171 FVCVVWKHSKIASGELTAEKYAAAGHVLMRPEATKKDFFGTLFTQKYGIKRHVIATTFSF 230 Query: 239 EQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRN 298 + +N+ R ++ L ++ LP +Q + WH+ Sbjct: 231 ASLPALVIGSENIA-TIHARLATKMAKVWPLKILPLPFDIPPMKQ-------CVQWHQYR 282 Query: 299 SHNPKIVWLRETIKNLY 315 +++ ++WLR T+K Sbjct: 283 NNDEGLIWLRNTLKEAA 299 >UniRef50_Q46PT5 Transcriptional regulator, LysR family n=1 Tax=Ralstonia eutropha JMP134 RepID=Q46PT5_RALEJ Length = 300 Score = 209 bits (534), Expect = 9e-53, Method: Composition-based stats. Identities = 43/314 (13%), Positives = 89/314 (28%), Gaps = 23/314 (7%) Query: 7 TLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTP 66 + L L + + T AA ++++T SA S + +L + L S + T Sbjct: 2 NVTLRQLRAFVEVARSGGFTAAAPKLHLTQSATSLQIRELESQLGLQLIDRSTRRFALTD 61 Query: 67 LMVSMEQNLAEWMQMSNLLLDKPHHQTP-RGLKFELAAESPLMMIMLNALSKQIYQRYPQ 125 + + + R + +A L +L YP Sbjct: 62 AGSEFLISAMRIVGDVEQSVADTRELVHKRRGRITVATTPLLASTLLPESIAHFLDAYPA 121 Query: 126 ATIKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 T+++ + + + + G+VD GF + D L V + Sbjct: 122 ITVRIADLPAEQIGRRVLSGDVDFGFG----------VFPEEDPQFDRIPLLRHPLGVMV 171 Query: 185 RKDHPAL--HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 P + P I++ +D L + G + + ++ Sbjct: 172 PSSWPLATRKRDLVWSDLEGQPLIAMSHATGMRTLIDQQLHQAGVQVNPRFEVAYLGTAV 231 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 +A L + P Y ++ L + + L+ S +P Sbjct: 232 GLAEA--GLGVTVVPAYVGKLMGSDRVRFRPL-------HKPVVHRQIELIVRAGRSLSP 282 Query: 303 KIVWLRETIKNLYA 316 R+ + Sbjct: 283 SAAAFRDCLAARCK 296 >UniRef50_A0NXF9 Probable transcription regulator protein n=2 Tax=Rhodobacteraceae RepID=A0NXF9_9RHOB Length = 312 Score = 209 bits (533), Expect = 1e-52, Method: Composition-based stats. Identities = 63/315 (20%), Positives = 113/315 (35%), Gaps = 22/315 (6%) Query: 1 MKKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPL 60 M +D L L + Q RS T+AA+ + V SAVS ++ KLR F DPLFV Sbjct: 1 MPADPLDVDFRALQVLVWVHQLRSFTRAAEELGVNQSAVSYTINKLRDVFQDPLFVRQAR 60 Query: 61 GLSPTPLMVSMEQNLAEWMQMSNLLLDKP-HHQTPRGLKFELAAESPLMMIMLNALSKQI 119 L PT + L P F +A ++++ + + Sbjct: 61 RLHPTQRCEDIVLQAKRLTSEFRQLAAPPDFDPLTASQTFTIACNFYERVLIIPEIVHFL 120 Query: 120 YQRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 + P +++ + + + R E D+ L+ D Sbjct: 121 KREAPNLDLEIIDASGIGHERLLRNEADLLIGP----------FERSDPHFYRRDLYQDR 170 Query: 180 PCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFE 239 L +HP + +L+ +L H+ + + L+ + ++ +A+ +P Sbjct: 171 YVCLLDPEHPKAGSSLSLEDYLDLDHVLVTYGGQWRSRYIIELERMNKDLKVALRVPSPA 230 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 + A + L+AT P + L +V P+ V +L+W N Sbjct: 231 GLERLVAGSN--LVATVPERLS-MSVAEGLRVVPCPV--------HTSVTISLVWTTLNH 279 Query: 300 HNPKIVWLRETIKNL 314 P +W+RE + L Sbjct: 280 RAPLHLWVREMVYRL 294 >UniRef50_Q1ATU8 Transcriptional regulator, LysR family n=1 Tax=Rubrobacter xylanophilus DSM 9941 RepID=Q1ATU8_RUBXD Length = 301 Score = 209 bits (533), Expect = 1e-52, Method: Composition-based stats. Identities = 41/312 (13%), Positives = 96/312 (30%), Gaps = 24/312 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L + +E +AA+R+++ +S + +L A LF + + T Sbjct: 1 MELRHLRYFVAVAEELHFGRAARRLHIVQPTLSAQIQRLEAELGAQLFHRTKRSVRLTEA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHH-QTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + ++ S + + + ++ +L + +RYP Sbjct: 61 GKAFLVEARLALEHSERAVREARRMAASETGRLDVGFVPSATYSVLTDVVGLYRRRYPGV 120 Query: 127 TIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + R ++A+ G +++GF S S ++ + L Sbjct: 121 DLVPREMHSSVQVEALLEGSIEVGFLRLPSDHES--------DELEVRPFVREQLVAVLP 172 Query: 186 KDHPALH-QTWNLDTFLRYPHISI--CWEQSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 + H + L+ + E L V G +A E + + Sbjct: 173 RGHRLASLRRVPLEALAGESFLIPRREREPGYHEQLLEVCGTAGFVPKVAQETTELQVGM 232 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 + A + L A + ++ + L P E+ ++ W + +P Sbjct: 233 ALTATGGYVGLFPAS---TRHVKMTGVVFKRLAEPVP-------EMELSVAW-QSGELSP 281 Query: 303 KIVWLRETIKNL 314 + + Sbjct: 282 ATRAFLGICEEV 293 >UniRef50_A6VZS6 Transcriptional regulator, LysR family n=4 Tax=Gammaproteobacteria RepID=A6VZS6_MARMS Length = 301 Score = 209 bits (533), Expect = 1e-52, Method: Composition-based stats. Identities = 45/276 (16%), Positives = 108/276 (39%), Gaps = 23/276 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L + +E+++T+AA+++ + +++ + +L LF GL+ TP Sbjct: 2 MELRHLRYFCAVAEEKNLTRAAEKLFIAQPPLTRQIKQLEEDVGAQLFDRHSRGLTLTPA 61 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + + ++++++ F + + L +L + + Q+ A Sbjct: 62 GKYFWEQAKQMLAKADMVIENTRRIAEEQKAVFSIGFVPSVFYGQLPSLVRDLRQQT-NA 120 Query: 127 TIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 I L + + ++A+ G++DIGF ++ +LF + V L Sbjct: 121 NILLHDLKTGEQIEALKTGKIDIGFGRLIIPDEQ----------VEQTILFQEPLLVALH 170 Query: 186 KDHPALHQ-TWNLDTFLRYPHISICWEQSDTWALDN----VLQELGRERTIAMSLPEFEQ 240 HP L + L+ + P I Q+ T + + G + + + + Sbjct: 171 VGHPLLKKGEPTLEELAKMPMILYPAGQAATPTFADICTSLFTSRGLTTKVTQQVNDLQT 230 Query: 241 SLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPL 276 +L + A + A +++ + +V +PL Sbjct: 231 ALGLVASE--MGFALVSEQVRHFGRD---DVVFIPL 261 >UniRef50_B1K4K0 Transcriptional regulator, LysR family n=3 Tax=Burkholderia cenocepacia RepID=B1K4K0_BURCC Length = 301 Score = 209 bits (533), Expect = 1e-52, Method: Composition-based stats. Identities = 71/311 (22%), Positives = 130/311 (41%), Gaps = 23/311 (7%) Query: 9 DLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLM 68 DLNLL +L+ ERSV KAAKR++++ SA+S++L+++R F DP+ + + L PTP Sbjct: 10 DLNLLKAFSVLVAERSVVKAAKRLHLSESAMSRTLSRVRDAFGDPILIRAGRSLIPTPRA 69 Query: 69 VSMEQNLAEWMQMSNLLLDKPH--HQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 +S+ + + + M+ +L + F + L + P Sbjct: 70 LSLHPRVLDMLAMAQDILTRAELVDPASLTQTFTIRCNEGFATEFGAKLLDIVTTAAPGV 129 Query: 127 TIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRK 186 ++ D A+ + DI +L I + L D + Sbjct: 130 HLRFAMQDEKDATALREDKADIEVG----------VLGKSGPEIRVQTLLRDRFVGVVAM 179 Query: 187 DHPALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMA 245 HP ++D + RYPH+S+ +D +L LG +R +A ++ F +L +A Sbjct: 180 SHPLAGHDPVSIDAYTRYPHVSVSRRGRRDGPIDALLSALGAKRRVATTVSSFPVALALA 239 Query: 246 AQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIV 305 ++A P + Q + + LP+ + V +++WH + +P Sbjct: 240 QG--GSIVANVP-FRQTASGRIGMHTFELPV-------QTEPVVVSMMWHPKVDPDPAHR 289 Query: 306 WLRETIKNLYA 316 WLR+ + A Sbjct: 290 WLRDCLLQTCA 300 >UniRef50_B6AU51 Transcriptional regulator, LysR family, putative n=1 Tax=Rhodobacterales bacterium HTCC2083 RepID=B6AU51_9RHOB Length = 299 Score = 209 bits (533), Expect = 1e-52, Method: Composition-based stats. Identities = 72/320 (22%), Positives = 120/320 (37%), Gaps = 22/320 (6%) Query: 1 MKKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPL 60 M +++ +D L LQL+ + RS T AA+ +NV S+VS ++ +LR F DPLFV Sbjct: 1 MNETLRGIDFGALETLQLVYRLRSFTAAAETLNVKQSSVSYTIDRLRKSFSDPLFVRQGN 60 Query: 61 GLSPTPLMVSMEQNLAEWMQMSNLLLD-KPHHQTPRGLKFELAAESPLMMIMLNALSKQI 119 +SPT +S+ + ++A ++L L + + Sbjct: 61 QISPTDKCISLVGYAERILAEIERASQPDIFDPASLRATVSISATYLSRAVLLPKLVRDL 120 Query: 120 YQRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 P TI+L D+ + G+ D+ S + I+ + LF D Sbjct: 121 RNEAPNITIELITGFTDANQQLLSGKADMALSPVAINES----------GINGKFLFDDP 170 Query: 180 PCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFE 239 + + L+ F H+ I + Q L++LG + +S E Sbjct: 171 YVCVMDPANKLAQADMTLEQFASAAHMFIHYGQKWQPPFRKKLKDLGYIMSPMISTANPE 230 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 M D L++ R Q + QL P P D Q W R + Sbjct: 231 DVGLMLPGTD-LIVTLPSRIAQQFAPQFQLR----PCPVDAVAQ------LNFYWPARLN 279 Query: 300 HNPKIVWLRETIKNLYASMA 319 ++P +W+R+ I NL Sbjct: 280 NSPLHIWMRDKIFNLAQDPG 299 >UniRef50_A5F3E5 Transcriptional regulator, LysR family n=29 Tax=Vibrio RepID=A5F3E5_VIBC3 Length = 308 Score = 209 bits (532), Expect = 1e-52, Method: Composition-based stats. Identities = 70/320 (21%), Positives = 134/320 (41%), Gaps = 24/320 (7%) Query: 1 MKKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPL 60 M + DLNLL +M+ SV+KAA ++ +T +AVS++L++LR DPLF+ Sbjct: 1 MIM-LRDYDLNLLTVFDSVMKLGSVSKAADKLGMTSAAVSQNLSRLREQVGDPLFIRQGR 59 Query: 61 GLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQ 118 GL PT ++M +++AE + L+ P +F + + +++L L ++ Sbjct: 60 GLQPTQYALNMHKHVAEGLSAIRFGLETDAGFDPATSKREFIIGGQGYFDLVVLPPLLQK 119 Query: 119 IYQRYPQATIKLRNWDYDSL---DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVL 175 I P T+ L++++ D ++ E D+ + L +I + Sbjct: 120 ISDIAPHITVNLKSYEDDHFTPSQVLSEREADLFLAA----------LPISHPSIVTTQV 169 Query: 176 FSDVPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSL 235 + V K+HP L T + + F H ++ + + +++ ++ R + Sbjct: 170 AEEALVVVYAKNHPRLGSTLSFEQFFAEKHTALTSRRFGNYLFSSLVDQVLPARRVHYQS 229 Query: 236 PEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWH 295 + A+ D L R + + L + LP VP + WH Sbjct: 230 ESMLNLMATASVTDLLCFT-PKRLADMWAEKLGLQIQPLPFEIR-------SVPTFMCWH 281 Query: 296 KRNSHNPKIVWLRETIKNLY 315 K + ++WLRE I+ + Sbjct: 282 KAKQQDKGLIWLREQIEAIL 301 >UniRef50_A5W321 Transcriptional regulator, LysR family n=3 Tax=Pseudomonas putida RepID=A5W321_PSEP1 Length = 293 Score = 209 bits (532), Expect = 1e-52, Method: Composition-based stats. Identities = 45/310 (14%), Positives = 99/310 (31%), Gaps = 25/310 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L C ++++ S TKAA+ +++ A+S ++ +L LF + + T Sbjct: 1 MNLKALRCCVEIVRQGSFTKAAQHLHIAQPALSMAVTRLEEELGVTLFNRTTRKVILTAE 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHH-QTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 +A ++ ++ + + + L + + L + YP Sbjct: 61 GEQFLPRIASALREMDVARQELRDMADLKRGEVRLGIPPMFGLHYVPGLMNAFRKSYPGI 120 Query: 127 TIKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + + + + + + E+D+ +P + +L SD + Sbjct: 121 AMTVFEGSAEDIGHRLEQREIDLALLES----------RRVPPDKESILLGSDEMLACMH 170 Query: 186 KDHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 DHP + + + LD E G +A+ + Sbjct: 171 PDHPYAGKAYLTAEDLRNTDMVVFDRTFVQRHLLDAFFAEHGITYQVALQSNFVSLVVQ- 229 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 A DN+ +AT R Q +V +P + ++ F L W + Sbjct: 230 -AALDNMGVATLLRSVQQRTPG----IVGVPF------RPAQQMSFRLCWRSGEYLSLAS 278 Query: 305 VWLRETIKNL 314 + Sbjct: 279 KRFIDFAAQT 288 >UniRef50_C3BCJ4 Transcriptional regulator LysR n=1 Tax=Bacillus mycoides Rock3-17 RepID=C3BCJ4_BACMY Length = 298 Score = 209 bits (532), Expect = 1e-52, Method: Composition-based stats. Identities = 41/314 (13%), Positives = 102/314 (32%), Gaps = 22/314 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +DL L+ +++E +T+AA R+++ +S L L L T Sbjct: 1 MDLKKLIYFVTIVEEGQITRAANRLHIAQPPLSMQLKALEEELGVILINRDKKEFELTHS 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKP-HHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + E + + ++ + Q K + + +L L + ++YP Sbjct: 61 GFTFYRRAKEVLDSIDGMITEVKEEQEGLRGKLSIGTVKSCVPYLLP-LLNKFKEKYPDV 119 Query: 127 TIKL-RNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 T +L + + ++++G + + + ++ L S+ Sbjct: 120 TFQLWEEDSQRLEELLLSKKIELGIVRLPLQSQDVKNI----NSLSIYPLHSEPLVAIQP 175 Query: 186 KDHPALHQT-WNLDTFLRYPHISICWEQSD---TWALDNVLQELGRERTIAMSLPEFEQS 241 KD ++ +P + + + ++ + G I + Sbjct: 176 KDWDKFESNVVTIEELKNFPLLILHSQGDIYIFHKFVE-TCKTHGFTPKIICESSDVSTL 234 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 + +A + +A P+ + Q L + K++ L+W + + Sbjct: 235 MKLAE--LGVGIAIVPKVAVHLLQQESLSYFEI--------VPKIKSDTALIWIENKYMS 284 Query: 302 PKIVWLRETIKNLY 315 +E NL+ Sbjct: 285 KAAHNFKELATNLF 298 >UniRef50_D0LUZ7 Transcriptional regulator, LysR family n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LUZ7_HALO1 Length = 306 Score = 209 bits (532), Expect = 1e-52, Method: Composition-based stats. Identities = 67/318 (21%), Positives = 131/318 (41%), Gaps = 22/318 (6%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 I +D NLL+ L L++E SVT+AA R+ +T SA+S +L +LR DPL V + + Sbjct: 1 MYIYGIDANLLVSLDALLREASVTRAAHRVGITQSAMSHALGRLRDHLGDPLLVRAGRNM 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPR--GLKFELAAESPLMMIMLNALSKQIY 120 T S+ ++ ++ + + P F L A +++ + + + Sbjct: 61 VLTAKAESLAPRVSVLVEEMSRVFAPDEEFEPAALRRGFALRATDHAQFVLMPEVDRLLR 120 Query: 121 QRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 P + + ++ + + + D+ H P I + L +D Sbjct: 121 AEAPGVDLVVTALSGGAVAPLRQAQSDLTLGTFSDH----------PSDIHSQALLTDRF 170 Query: 181 CVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQ 240 +R DHPA+ + + + HI + + +D VL ELG R I+ +P Sbjct: 171 VCLVRGDHPAIARGLGVAQYAAMTHIHV--GPAQLGVVDRVLGELGIARRISRVVPHVLV 228 Query: 241 SLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 + + A D + + + R Q ++ ++ P+P ++ WH+R+ Sbjct: 229 APLLIADSDAV-VTMSERLAQRALPGAEVAMLEPPVPLPPC-------TLSMAWHERHDA 280 Query: 301 NPKIVWLRETIKNLYASM 318 +P WLR+ + + + Sbjct: 281 DPAHRWLRDAVLRAASHL 298 >UniRef50_Q7W9G9 Probable LysR-family transcriptional regulator n=2 Tax=Bordetella RepID=Q7W9G9_BORPA Length = 296 Score = 209 bits (532), Expect = 1e-52, Method: Composition-based stats. Identities = 44/311 (14%), Positives = 96/311 (30%), Gaps = 26/311 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L + ++ T+AA R+ + +S + +L PL + P G++ T Sbjct: 1 MELRHLRYFVAVAEDLHFTRAAARLGIGQPPLSLQIQQLEREIGTPLLLRQPRGVALTEA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQT-PRGLKFELAAESPLMMI-MLNALSKQIYQRYPQ 125 Q+ + + L ++ + + + L + + RYP Sbjct: 61 GARFLQDARAVLHAAELAVETARRLGHGEQGDIAVGFTASAVFHPYLPSAIRAYRDRYPG 120 Query: 126 ATIKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 I L + L + GEVD+ F +L E + + V L Sbjct: 121 VRIALSESNARALLAGLRSGEVDVAFVRPP---------YALDDEFASERVLDEPMLVAL 171 Query: 185 RKDHPALH-QTWNLDTFLRYPHISICW--EQSDTWALDNVLQELGRERTIAMSLPEFEQS 241 DHP +T + + A+ Q G + P+ Sbjct: 172 PPDHPLCRKRTVPVAALAEQDFVLYPRPIGAGLYDAIMQACQRAGFTPRVIQEAPQMASI 231 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 + + A + +A P ++ + + + + + +R + Sbjct: 232 ISLVAA--GVGIAVVPAAMRHMGAAG--------IVYRPIRGDAPRALLDMAY-RRQPRS 280 Query: 302 PKIVWLRETIK 312 + E ++ Sbjct: 281 AAVRHAVELLR 291 >UniRef50_Q7MCM8 Transcriptional regulator n=8 Tax=Vibrionaceae RepID=Q7MCM8_VIBVY Length = 298 Score = 209 bits (532), Expect = 1e-52, Method: Composition-based stats. Identities = 61/314 (19%), Positives = 120/314 (38%), Gaps = 24/314 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +D NLL + + RS+T AA + +T VS L +L+ LF G++PT Sbjct: 5 IDFNLLKVFVTVYRHRSITLAADAMGLTQPGVSGILKRLQEQLGVTLFTRDGRGIAPTHH 64 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + + + + L+ KF + A PLM+ +L + + Sbjct: 65 AHELARQVEPALSQIHNALESLEAFRTDTYRKFVIYAPEPLMLTLLPKIEGD--STLGKI 122 Query: 127 TIKLRNWDYDSLDA---ITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVW 183 I+L++ YD + + + + D+ S E L +D C+ Sbjct: 123 DIELQHMPYDVDEQFTRLNQQQADLAIDFVHHSAPS----------FYSEKLMNDEICLI 172 Query: 184 LRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 R+ HP + + D + + HI++ + + + D +E R +A + Sbjct: 173 ARRGHPRIQGAISRDEYYQEKHITLKMRRENVYLADYFTEEFLNVRRVAAECDSMVAQMS 232 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 + A D + + T + + + L ++ P + + + LL H R ++P Sbjct: 233 LVATSDCIAMVT-RSLAEQFAETLGLQVLHSP-------MTAIPITYRLLIHNREINSPA 284 Query: 304 IVWLRETIKNLYAS 317 WLRE + + Sbjct: 285 NQWLRERLSRYFTQ 298 >UniRef50_Q471I4 Regulatory protein, LysR:LysR, substrate-binding n=1 Tax=Ralstonia eutropha JMP134 RepID=Q471I4_RALEJ Length = 323 Score = 209 bits (532), Expect = 1e-52, Method: Composition-based stats. Identities = 78/315 (24%), Positives = 127/315 (40%), Gaps = 23/315 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 L LN LL L +L+ ERS+TKAA+ +N+T A+SK+LA+LR +F DPLFV L + PTP Sbjct: 12 LSLNQLLVLDVLLSERSLTKAARVLNLTQPALSKTLARLRQYFGDPLFVRVGLRMEPTPK 71 Query: 68 MVSMEQNLAEWMQMSNLLLDKP--HHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQ 125 + + + +Q L F ML L ++ + P Sbjct: 72 ALELADPVRGILQSVRALRSDHVGFDPRTSQRSFSFFLLDAGASQMLPPLLSRLAEEAPG 131 Query: 126 ATIKLRNWDYDSLD-AITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 ++ N D LD + G VD+ +S I ++L+ + + Sbjct: 132 ILVQAVNADATHLDIWLENGLVDLAIGSFPGLTQS----------IRRQLLWHETYGAVV 181 Query: 185 RKDHPALHQTWNLDTFLRYPHISICWEQSDTWA--LDNVLQELGRERTIAMSLPEFEQSL 242 RKDHP L Q +LD F+ H+ + + ++ ++ I +P F + Sbjct: 182 RKDHPRLAQLGDLDAFVAEKHVLVSAVGTGHQHLSIERAIEAAVPHTNIICRVPSFATAG 241 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 +A D + + + + L +V PL + WH R P Sbjct: 242 LIAKHSDAVAVLPL-TLARALCKDLDLTVVMPPLTLP-------GMDIAQHWHDRVHREP 293 Query: 303 KIVWLRETIKNLYAS 317 W+R + L+A Sbjct: 294 GNQWIRALVHRLFAR 308 >UniRef50_A3YI62 Transcriptional regulator, LysR family protein n=2 Tax=Oceanospirillaceae RepID=A3YI62_9GAMM Length = 305 Score = 209 bits (532), Expect = 1e-52, Method: Composition-based stats. Identities = 58/318 (18%), Positives = 127/318 (39%), Gaps = 20/318 (6%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 + DLNLL+ + L+ E V++AA+++ ++ SA+S +L +LR DDPL V + GL+P Sbjct: 4 LRQFDLNLLIIFEALISECHVSRAAEKVFLSQSAMSHALNRLRTQLDDPLLVKTENGLTP 63 Query: 65 TPLMVSMEQNLAEWMQMSNLLLDKPHHQTP--RGLKFELAAESPLMMIMLNALSKQIYQR 122 TP ++M ++ + + + + F +A+ ++ Q+ Sbjct: 64 TPRALAMLPDVRQALNLVERTISPAESFQASLSDRTFRIASTDYFETVVFPEWFSQLQLS 123 Query: 123 YPQATIKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPC 181 P +++ + +L + +GE+D+ + LP + + ++ Sbjct: 124 APNVRVEIDLISEESALLRLEKGEIDLIVGMDKEQ--------KLPSHLIVQDWLTEKQV 175 Query: 182 VWLRKDHPALHQTWNLDTFLRYPHI-SICWEQSDTWALDNVLQELGRERTIAMSLPEFEQ 240 + + +L+ +L PHI E +D L R S + Sbjct: 176 CLASIQNQNARGSLSLEAYLALPHIRFFDLEGKTDSNVDRWLASQTLARNHIASTTNYMA 235 Query: 241 SLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 + + A + + + + + Q+ + +V P + TL+ H + Sbjct: 236 AARIVANTEAI-ITLPYHMAKLFTQMMPVSIVTPP-------DGLPAIDMTLVQHPLYAK 287 Query: 301 NPKIVWLRETIKNLYASM 318 + I+WL++ + S+ Sbjct: 288 DSGIIWLKQVLCEHVKSL 305 >UniRef50_P77559 Uncharacterized HTH-type transcriptional regulator ynfL n=179 Tax=Gammaproteobacteria RepID=YNFL_ECOLI Length = 297 Score = 209 bits (532), Expect = 1e-52, Method: Composition-based stats. Identities = 39/316 (12%), Positives = 101/316 (31%), Gaps = 26/316 (8%) Query: 7 TLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTP 66 ++L L + +E +AA R+N++ +S+ + L L + + T Sbjct: 2 NIELRHLRYFVAVAEELHFGRAAARLNISQPPLSQQIQALEQQIGARLLARTNRSVLLTA 61 Query: 67 LMVSMEQNLAEWMQMSNLLLDKPHHQ-TPRGLKFELAAESPLMMIM-LNALSKQIYQRYP 124 + + + M + + + + S I ++ + YP Sbjct: 62 AGKQFLADSRQILSMVDDAAARAERLHQGEAGELRIGFTSSAPFIRAVSDTLSLFRRDYP 121 Query: 125 QATIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVW 183 ++ R + + + G +D+G ++LP ++++ V+ + Sbjct: 122 DVHLQTREMNTREQIAPLIEGTLDMGLLRN----------TALPESLEHAVIVHEPLMAM 171 Query: 184 LRKDHPALHQT-WNLDTFLRYPHISICW--EQSDTWALDNVLQELGRERTIAMSLPEFEQ 240 + DHP + L + P + + +++ I + E Sbjct: 172 IPHDHPLANNPNVTLAELAKEPFVFFDPHVGTGLYDDILGLMRRYHLTPVITQEVGEAMT 231 Query: 241 SLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 + + + L ++ P + + +P+ ++ L+W K + Sbjct: 232 IIGLVSA--GLGVSILPASFKRVQLNE---MRWVPIA-----EEDAVSEMWLVWPKHHEQ 281 Query: 301 NPKIVWLRETIKNLYA 316 +P R + N Sbjct: 282 SPAARNFRIHLLNALR 297 >UniRef50_B6AZI7 Transcriptional regulator, LysR family n=1 Tax=Rhodobacterales bacterium HTCC2083 RepID=B6AZI7_9RHOB Length = 301 Score = 209 bits (532), Expect = 1e-52, Method: Composition-based stats. Identities = 42/312 (13%), Positives = 98/312 (31%), Gaps = 28/312 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +DL C + +E +AAKR+ V A+S+++ + L S + T + Sbjct: 3 IDLRHFRCFVAVAEELHFHRAAKRLGVAQPALSRTIKTMENELGVTLLERSNRRVELTHV 62 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + ++ S +++ + M L +L K + P Sbjct: 63 GEIFLTGCRKCLEHSERIIEDMQRVQQGSIGTLRIGYTENAMNGQLPSLLKAFKGQTPDI 122 Query: 127 TIKL-RNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 ++ L + + + + G +D+GF+ + + S+ + Sbjct: 123 SLVLTHSVTSEQVSQLEDGSIDLGFATGNLAKT----------GFESIRIQSERFVCVVY 172 Query: 186 KDHPAL-HQTWNLDTFLRYPHI--SICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 HP + L P + + Q L+ + + G E IA Sbjct: 173 DSHPFATRSSICLSELAEEPMVQGARAHWQHYYSRLEPLFRTAGFEPKIAQEGLTTTDIQ 232 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH-- 300 + A + +A + + L + + +W + + Sbjct: 233 RLVAC--GIGIAILTETV--------VDCLPSGLAVLPIEDVTDCLDTIAVWPAKQNTVA 282 Query: 301 -NPKIVWLRETI 311 + + +LR+++ Sbjct: 283 KDRFVSFLRQSL 294 >UniRef50_Q7D3I0 Transcriptional regulator, LysR family n=1 Tax=Agrobacterium tumefaciens str. C58 RepID=Q7D3I0_AGRT5 Length = 316 Score = 209 bits (532), Expect = 2e-52, Method: Composition-based stats. Identities = 57/328 (17%), Positives = 131/328 (39%), Gaps = 33/328 (10%) Query: 2 KKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLG 61 + + ++DLNLL + L+ + ++T A + I ++ A+S +L ++RA D LF + G Sbjct: 3 RFQLGSVDLNLLKVIYALVVKGNMTAAGEYIGLSQPAMSHALKRVRAITGDELFKKTSRG 62 Query: 62 LSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQI 119 T + + ++ + ++ + P F + ++++ L +++ Sbjct: 63 FVMTRFCTEIFPAVRRIIEDTETVMLQRLAFDPATSHRAFRIGMNDYFSVVLMPRLVERV 122 Query: 120 YQRYPQATIKLRNWDYDSL-----------DAITRGEVDIGFSGRESHPRSRELLSSLPL 168 +++ + + + + G +D+ E + P Sbjct: 123 RSEAEHCVLEVIHMPRTGISHNRDFMPVVQEHLNEGTIDVAVMTAE----------NFPA 172 Query: 169 AIDYEVLFSDVPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRE 228 LF++ + ++PA + LD L H+ + S +D L +G E Sbjct: 173 RYRCASLFTERRVCIMSANNPAAKEPLTLDALLSLGHVKVTSSPSRRGWIDERLDAMGLE 232 Query: 229 RTIAMSLPEFEQSLFMAAQPDNLLLATAP-RYCQYYNQLHQLPLVALPLPFDESQQKKLE 287 R + +P F ++ + ++ D L+A P + + + H+L L+ P ++ Sbjct: 233 RRVVAVVPHFSAAVAIVSRSD--LVAMMPESVAKLFERSHELLLLESPFEEEKQ------ 284 Query: 288 VPFTLLWHKRNSHNPKIVWLRETIKNLY 315 +++W +P +WLRE I + Sbjct: 285 -STSMIWLAEKERDPASLWLREQISACF 311 >UniRef50_Q4ZY05 Regulatory protein, LysR:LysR, substrate-binding n=1 Tax=Pseudomonas syringae pv. syringae B728a RepID=Q4ZY05_PSEU2 Length = 298 Score = 209 bits (532), Expect = 2e-52, Method: Composition-based stats. Identities = 50/304 (16%), Positives = 103/304 (33%), Gaps = 22/304 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L ++++ S ++AA +++T S+VSK++ L PL T Sbjct: 1 MNLRTLRTFVEVVRQGSFSQAADVVSLTQSSVSKAVKTLEDELGTPLLSRIGHRSELTAA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + + N LL + + + + A+ Q RYP Sbjct: 61 GEIVYRRALTLLAERNDLLTELNDLRGLKGGVLRIGLPPVGSGALFAAMFTQYRARYPDI 120 Query: 127 TIKLRN-WDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 I+L + + GEV++ + ++S DY+ + + V + Sbjct: 121 DIQLTEHGASKLHECLASGEVELA---------ALLKMNSFSEEFDYQDVRIEPVVVVMA 171 Query: 186 KDHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 ++HP + ++ P I + + G + + + + + Sbjct: 172 ENHPLAKRKRVVIEDLAETPFILFEAGFALNTMIKLACDRKGVTPKVTARSGQVDFIVDL 231 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 + L +A PR + + LVAL + + L W K +P Sbjct: 232 VSA--GLGVAFLPRMLAQKHYHDGIRLVAL-------NEPDTDWHMVLAWRKNAHLSPAA 282 Query: 305 -VWL 307 WL Sbjct: 283 EAWL 286 >UniRef50_Q1M9F6 Putative LysR-family transcriptional regulator n=1 Tax=Rhizobium leguminosarum bv. viciae 3841 RepID=Q1M9F6_RHIL3 Length = 317 Score = 209 bits (532), Expect = 2e-52, Method: Composition-based stats. Identities = 72/317 (22%), Positives = 132/317 (41%), Gaps = 21/317 (6%) Query: 4 SITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLS 63 S+ +DLNLL +LM+ERSVT+AA R+ T SA+S SL +LR F D LF + Sbjct: 5 SLNQIDLNLLRTFDVLMRERSVTRAADRLGRTQSAISHSLGRLRDVFKDDLFTREAGIME 64 Query: 64 PTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQIYQ 121 PT + + +++ + + +D+ + P F + + L L + Sbjct: 65 PTARAKELAEVISQALHEIRVAVDRHLNFDPTTTSRNFRIGLSDYTAVTYLPELIENFSM 124 Query: 122 RYPQATIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 P A++ + + + D+L ++ EV+ G + L D Sbjct: 125 LAPNASLNVVHAREPDALGSLKNREVECAVLGNPKLDAE---------HFEVVELSRDRM 175 Query: 181 CVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQ 240 +PA+ +LD +L PH+ I + D LQ+LG R + ++P + Sbjct: 176 VCAGWTGNPAMAD-MSLDRYLASPHLQISADGIAAGVADITLQKLGLHRKVVATIPHYLV 234 Query: 241 SLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 + ++ + + A ++ + +V PL +V +L++ + N Sbjct: 235 APWVIKGTELIS-AFGDGVLLALSEESETAIVPPPLELP-------DVTISLIFDRSNEL 286 Query: 301 NPKIVWLRETIKNLYAS 317 +P VW R IK++ Sbjct: 287 DPGHVWFRNLIKDVSDR 303 >UniRef50_B9B1S8 Transcriptional regulator, LysR family n=1 Tax=Burkholderia multivorans CGD1 RepID=B9B1S8_9BURK Length = 319 Score = 209 bits (532), Expect = 2e-52, Method: Composition-based stats. Identities = 75/318 (23%), Positives = 133/318 (41%), Gaps = 24/318 (7%) Query: 6 TTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPT 65 LDLNLL Q +++ERS+TKA +R+ ++ AVS SL +LR FDDPLFV + G+ PT Sbjct: 18 DHLDLNLLRVFQAIVEERSLTKAGERLALSQPAVSYSLGRLRTLFDDPLFVRTRAGMQPT 77 Query: 66 PLMVSMEQNLAEWMQMSNLLLDKPHHQTPR--GLKFELAAESPLMMIMLNALSKQIYQRY 123 P+ + + + + + M + L P F L+ M L A+ + + +R Sbjct: 78 PVALELAGIVGKALDMVRVALRYAERFDPATSTRTFRLSLSDAGEMAYLPAICRALRERA 137 Query: 124 PQATIKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCV 182 P+ T+ ++ +++ +A+ +D +++LF + Sbjct: 138 PRVTLSVQPMPVEAIEEALRASRLDFAIGNLPELMPRT----------RHQLLFEETYVC 187 Query: 183 WL--RKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQ 240 R+ P T L+ F+R H+++ + ALD+ L+ G R +A+ +P F Sbjct: 188 MTGRRRGLP-SGTTLTLEQFVRAAHVNVKSVEHSHHALDDALRAQGVGRNVALEVPHFVA 246 Query: 241 SLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 + D R Q N+ + L P T+ WH+ Sbjct: 247 LPGVLQVTDLYA-TLPKRLAQILNRDNAFRLY-------ALPVPLPPAPVTMHWHEHFHE 298 Query: 301 NPKIVWLRETIKNLYASM 318 + I W+R + + Sbjct: 299 DEGITWMRALLAEIVERF 316 >UniRef50_Q5X4A2 Hydrogen peroxide-inducible genes activator n=4 Tax=Legionella pneumophila RepID=Q5X4A2_LEGPA Length = 296 Score = 208 bits (531), Expect = 2e-52, Method: Composition-based stats. Identities = 42/315 (13%), Positives = 92/315 (29%), Gaps = 33/315 (10%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L +L + +AAKR V+ +S + KL LF + + T Sbjct: 1 MNLRDLHYFVILADVKHFGEAAKRCFVSQPTLSMQIKKLEEELGVVLFERTNKQVLLTDQ 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQ-TPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + + + + + + P + L + ML + ++ YP+ Sbjct: 61 GSKLLDRTRKILILIDEMKELARQSEDPFTGELRLGVIPTVSPYMLPLVMPELKNEYPRL 120 Query: 127 TIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + L + + + +GE+D+ + ++L+ + Sbjct: 121 KVWLIEDKTHRLITKLEQGELDVAIMALP-----------IDKRFSCQILYEEKFYFACA 169 Query: 186 KDHPALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIA-MSLPEFEQSLF 243 HP ++ N++ P + + V Q + IA + E Sbjct: 170 NTHPLAQAKSVNINDLKNQPIMLLEEGHCLREQAMAVCQLAKAD-DIADFTATSLETLRL 228 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 M + + P + L + + L W Sbjct: 229 MVQA--GMGVTLLPALSTLTASTNHLKCIPF-------SEPAPSRILGLFWRAGTP---- 275 Query: 304 IVWLRETIKNLYASM 318 R+ N A + Sbjct: 276 ----RQVCFNAVAEL 286 >UniRef50_C5BDD2 HTH-type transcriptional regulator AlsR n=2 Tax=Edwardsiella RepID=C5BDD2_EDWI9 Length = 330 Score = 208 bits (531), Expect = 2e-52, Method: Composition-based stats. Identities = 49/332 (14%), Positives = 108/332 (32%), Gaps = 38/332 (11%) Query: 1 MKKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPL 60 M +++ L + +ER +AA+R+N++ +S+ + L L + + Sbjct: 16 MVM---RIEIRHLKYFIAVAEERHFNRAAERLNISQPPLSQQIQSLERELGACLLMRTNR 72 Query: 61 GLSPTPLMVSMEQNLAEWMQMSNLLLD-KPHHQTPRGLKFELAAESPLMMIMLNALSKQI 119 +S T + + + + S + + ++ + Sbjct: 73 SVSLTQAGSLFLKECYSIVGQLEQAAEKAARAHRGETGDLTIGFTSSV--PFIPRVAHSL 130 Query: 120 ---YQRYPQATIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVL 175 RYPQ +++R + ++ + G++DIG + LP + + VL Sbjct: 131 FSYRHRYPQVHLQMRELNTKQQIEPLVDGKLDIGILRN----------TLLPGVLKHRVL 180 Query: 176 FSDVPCVWLRKDHPALHQ--TWNLDTFLRYPHISICWEQSD--TWALDNVLQELGRERTI 231 + L + HP + P + L ++L+ G I Sbjct: 181 QREPLVAVLHRHHPLAQRGQALRFSDLADQPFVFFSRGDGTALYDELLSLLKRAGIVPYI 240 Query: 232 AMSLPEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFT 291 + E + + + L ++ P Q+ + AL P Sbjct: 241 TQEVGEAMTIVGLISA--GLGVSILPASYTRI-QVDGVCYRALDEP-------DAYTEVW 290 Query: 292 LLWHKRNSHNPKIVWLRETIKN----LYASMA 319 L +H++ + + L + L AS+A Sbjct: 291 LAYHRQRPLSAQATALIALLTAPSSNLIASLA 322 >UniRef50_C2FRR6 LysR family transcriptional regulator n=2 Tax=Sphingobacterium spiritivorum RepID=C2FRR6_9SPHI Length = 295 Score = 208 bits (531), Expect = 2e-52, Method: Composition-based stats. Identities = 46/316 (14%), Positives = 102/316 (32%), Gaps = 26/316 (8%) Query: 1 MKKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPL 60 M ++L L + L +E KAA +++++ SA+S+ + L LF Sbjct: 1 MISKTNQIELRQLRYFRALAEELHYHKAADKLHISQSALSQQIKLLEQQLGVSLFDRLNK 60 Query: 61 GLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQ-TPRGLKFELAAESPLMMIMLNALSKQI 119 +S + +Q +++ T ++ + M L K+ Sbjct: 61 KISLSDPGELFYAEAVRILQQVERSMERLDQFHTGSAGTLKIGFVASAMSSFLPEAIKKF 120 Query: 120 YQRYPQATIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSD 178 + YP ++ + + L A+ G++DIGF +L +F + Sbjct: 121 HTAYPAIHLRFEEMNNFEQLPALENGDIDIGFMRSNQVRDQMHILR----------VFEE 170 Query: 179 VPCVWLRKDHPALHQTW-NLDTFLRYPHISIC--WEQSDTWALDNVLQELGRERTIAMSL 235 + L ++H + + +L I + + N+ + G I Sbjct: 171 TFTLILPRNHRFGNYHFKDLSILKDEDFILFPNAKSEFYFQQIINLCSDSGFYPRITHQA 230 Query: 236 PEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWH 295 + + ++ P + + + E + +W Sbjct: 231 IHGPTIFSLV--GCGMGISIIPTSLAQLHTEDVIAI--------ELKAIPQRTQIFAVWD 280 Query: 296 KRNSHNPKIVWLRETI 311 K N + P+I ++I Sbjct: 281 KSNQN-PQIQRFMKSI 295 >UniRef50_C0ZFW3 Transcriptional regulator n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZFW3_BREBN Length = 292 Score = 208 bits (531), Expect = 2e-52, Method: Composition-based stats. Identities = 46/313 (14%), Positives = 106/313 (33%), Gaps = 27/313 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 + LN + +++ S+TKA + + +T SA+S ++A L F L G+S T Sbjct: 1 MSLNKFEVVITVIESGSLTKAGEILGLTQSAISHAIASLEREFGFSLLTRGRSGISLTSN 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + E ++ + + + + + L + K+ +YP Sbjct: 61 GERLLPYMRETLRCHERMKQEVFAINGLEVGTVRIGTFTSVSTQWLPGILKRFQDQYPAI 120 Query: 127 TIKLRNWDYDSLD-AITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 IKL YD ++ I GE+D GF + +++ L D + + Sbjct: 121 EIKLMEGYYDGIESWIQTGEIDFGFVSLPTTE-----------DLEWIPLKKDQMYLLVT 169 Query: 186 KDHPALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 ++HP + ++ I + + +L + E I + + + M Sbjct: 170 EEHPLYKEERVHVSRLAEETFIMPKTGCDND--IQRLLAQYQIEPRIKYEVGDDHAIIAM 227 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 + L ++ P + + ++ L + + + +P Sbjct: 228 VQ--NGLGISILPEMIL-FRLPANIRMIPL--------EGEHYRSLGVAATSFAKQSPAA 276 Query: 305 VWLRETIKNLYAS 317 + + + Sbjct: 277 KRFLQCVTDWVNE 289 >UniRef50_Q399F7 Transcriptional regulator, LysR family n=1 Tax=Burkholderia sp. 383 RepID=Q399F7_BURS3 Length = 313 Score = 208 bits (531), Expect = 2e-52, Method: Composition-based stats. Identities = 63/317 (19%), Positives = 121/317 (38%), Gaps = 24/317 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +D +LL L L+ E SV++ A+ + + +S +L +LRA DPL V S + PT Sbjct: 6 IDAHLLKILHTLITESSVSRTAELLGQSQPTISVALRRLRAITGDPLLVRSGSRMVPTSH 65 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQIYQRYPQ 125 +++ + L + + +L+ P F + + L + L A+ P Sbjct: 66 AMTLVEPLDQALAGIAAVLNPASTFDPATTHRTFRIGSPDYLDVFFLPAIVDAFKHEAPG 125 Query: 126 ATIKLRNW---DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCV 182 A I+ ++ D A+ G +D+ + P + + L D Sbjct: 126 ARIEFQHLMTVDGGYEHALESGSLDLAVGNWSTP----------PQQLHLQPLCRDDLVC 175 Query: 183 WLRKDHPALHQTWNLDTFLRYPHISICWEQSDT-WALDNVLQELGRERTIAMSLPEFEQS 241 +R DH D + H+ + + +D L G R + ++P F + Sbjct: 176 VMRDDHRIRRGQLTADVYREADHLGVTTHHATGLGTIDRELARGGLSRNVTTTMPYFGMA 235 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 ++ + + LL T ++ L L + +P + + + LWH R + Sbjct: 236 PYVLMRSN-LLFTTTRTLATHFCSLLPLRIEPIP-------CEPQALTYYQLWHDRTHRS 287 Query: 302 PKIVWLRETIKNLYASM 318 VWLR + + + Sbjct: 288 AAAVWLRRLVSGVAKKL 304 >UniRef50_A3Y6R5 Transcriptional regulator, LysR family protein n=2 Tax=Gammaproteobacteria RepID=A3Y6R5_9GAMM Length = 312 Score = 208 bits (531), Expect = 2e-52, Method: Composition-based stats. Identities = 69/311 (22%), Positives = 131/311 (42%), Gaps = 21/311 (6%) Query: 9 DLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLM 68 + LL L ++Q R++T +A +NVT SA+SK+L+++R F D + + T Sbjct: 3 NYKLLPALVSILQTRNLTASAAELNVTQSAMSKTLSQIREAFHDKILIREGNQFVLTQKG 62 Query: 69 VSMEQNLAEWMQMSNLLLDKPH-HQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQAT 127 ++ L + MQ + L +F +A+ + ++ +++ ++ P + Sbjct: 63 EQLKTQLPDLMQTLDGLYAPNTMELELCQRRFSIASSDYVAQAVVPMITRVMHDEAPNVS 122 Query: 128 IKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKD 187 ++ + W L + +D+ + +P + D V LR+ Sbjct: 123 LEFQAWQPSKLTELAETSIDLV----------TTIAEEVPENLQGRWCAEDELVVMLRQG 172 Query: 188 HPAL--HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMA 245 HP L Q ++LD + + HI I LD L GR+R + + +P ++ ++ + Sbjct: 173 HPILNKAQAFSLDDYCQSKHILISGGGDKNSPLDQALLAEGRQRQVLIQVPFYQAAIELV 232 Query: 246 AQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIV 305 D LL + Q H + L LP+ +Q + LLWH ++ H+P+ Sbjct: 233 LNTDALL-TLPMHIAGDFAQRHDVTLRRLPISLVPNQ-------YYLLWHTKHHHDPEHK 284 Query: 306 WLRETIKNLYA 316 W RE L Sbjct: 285 WFRELCTGLLQ 295 >UniRef50_Q11BY5 Transcriptional regulator, LysR family n=1 Tax=Chelativorans sp. BNC1 RepID=Q11BY5_MESSB Length = 307 Score = 208 bits (531), Expect = 2e-52, Method: Composition-based stats. Identities = 50/321 (15%), Positives = 105/321 (32%), Gaps = 31/321 (9%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L +L +E +AA+++N+T S +S ++ L LF + + T + Sbjct: 1 MNLKQLQYFSVLAEELHFRRAAEKLNITQSPLSIAIQNLEQELGAKLFHRNQRSVQLTEV 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQ-TPRGLKFELAAESPLMMIML---NALSKQIYQRY 123 + + + + + +A +L L +++ Sbjct: 61 GRRLYDHAQGLISRLEHCEQDIRAIVNGKAGQLRIAF--TAASSLLSPFPKLISAFQKKF 118 Query: 124 PQATIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCV 182 P+ ++L++ + A++ G +DIG R +P I L +D V Sbjct: 119 PEIDVQLQSMTTVQQISALSEGTIDIGLLRRPRQS--------IPAEISTRRLATDRLVV 170 Query: 183 WLRKDHPALHQT-WNLDTFLRYPHISICW--EQSDTWALDNVLQELGRERTIAMSLPEFE 239 L HP ++ + + I + + G I E Sbjct: 171 ALPSGHPLTSKSVVAIPELAKEKFIFFPRKMGIGIYDQFIKLCGKWGFAPDIVQEAEEAT 230 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALP-LPFDESQQKKLEVPFTLLWHKRN 298 + + A L +A P L + +P L F + L + + Sbjct: 231 TIVGLVAA--GLGVAVVP---------GGLRYIQIPNLEFRHIADEDAITELLLAF-RTG 278 Query: 299 SHNPKIVWLRETIKNLYASMA 319 N K+ L + +++ A Sbjct: 279 EANLKVQQLVHLAQQAFSTEA 299 >UniRef50_B1J8H5 Transcriptional regulator, LysR family n=5 Tax=Pseudomonas RepID=B1J8H5_PSEPW Length = 323 Score = 208 bits (531), Expect = 2e-52, Method: Composition-based stats. Identities = 48/309 (15%), Positives = 104/309 (33%), Gaps = 20/309 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++ LL + +E KAA R+++ +S+++ +L LF+ + G+ T Sbjct: 2 IETRLLRQFIAVAEELHFHKAAIRLHMAQPPLSQAINRLEEKLGFSLFLRNKRGVKLTAA 61 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 ++ + ++ ++ + + K + A S L K+ + YP Sbjct: 62 GMAFLETAYRTLKELEQGIEYARNVSEGICGKLTITAISIAYYESLLNTLKKFREIYPNV 121 Query: 127 TIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + +R A+ GE DIGF + L P I+ +L ++ + L Sbjct: 122 RLTIREMPSASQAKALMAGEADIGFMRK---------LPMPPDTIESRLLLNEQIVMALP 172 Query: 186 KDHPALHQT-WNLDTFLRYPHISICW--EQSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 +H HQ +L F + L + + G + + + Sbjct: 173 ANHAKAHQPMVDLRDFAEEDFVFTPQALGSGYHSQLIALCESAGFYPKVVQEAAQIHTLI 232 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 + A +A P Y ++ + Q + + W+ +N +P Sbjct: 233 GLVAC--GFGVALVPESIAYSTLRERVQFRPIR---PIKDQPTPTMGLYMNWNTQN-ASP 286 Query: 303 KIVWLRETI 311 + + Sbjct: 287 ALGSFISML 295 >UniRef50_UPI000178A8A2 transcriptional regulator, LysR family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI000178A8A2 Length = 300 Score = 208 bits (531), Expect = 2e-52, Method: Composition-based stats. Identities = 42/293 (14%), Positives = 87/293 (29%), Gaps = 22/293 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L + +E ++AA+++ V+ VS+ + +L A LF + T Sbjct: 1 MELKQLQYFMAICEELHFSRAAEKMGVSAPNVSQQIRRLEAELGVLLFDRVGKTIVLTDA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + ++ A D + +M NAL +Q YP Sbjct: 61 GAILHEHAAAVFGHLQQAGDAIADLKQMQGGSLSIGVLPGDADLMFNALLLDFHQTYPTI 120 Query: 127 TIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRK 186 ++ L + + +DIG + + + LF + + + + Sbjct: 121 SLSLLE-TMKVTEQVLDRSIDIGVTIGPV----------IDERLTSIPLFHEEFSLAVHR 169 Query: 187 DHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMA 245 D P + L+ + + +D + G M L M Sbjct: 170 DDPLAGENFIPLNRLRSMNMVMFPPDHQCRKLIDRFCMDNGFAVQPHMVTTTLSSLLQMV 229 Query: 246 AQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRN 298 + PR + ++ +V L P L++ Sbjct: 230 QS--GVGACVLPRLLLDNLRNTEIKVVHLRNPTPSQ-------DICLIYRSDR 273 >UniRef50_P0ACR7 Uncharacterized HTH-type transcriptional regulator yfeR n=158 Tax=Proteobacteria RepID=YFER_ECOLI Length = 308 Score = 208 bits (531), Expect = 2e-52, Method: Composition-based stats. Identities = 47/315 (14%), Positives = 98/315 (31%), Gaps = 23/315 (7%) Query: 7 TLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTP 66 L L + QE+S ++A +RI ++ SAVS S+ +L L + + T Sbjct: 2 NYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTD 61 Query: 67 LMVSMEQNLAEWMQMSNLLLDKPHHQ-TPRGLKFELAAESPLMMIMLNALSKQIYQRYPQ 125 + L + N L K +AA + ++ + ++RYP Sbjct: 62 AGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPD 121 Query: 126 ATIKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 L + +++I +G+VD G + E + S+ + Sbjct: 122 IQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVG----------DLQCEAILSEPFFLLC 171 Query: 185 RKDHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 +D + + +D L G + I + Sbjct: 172 HRDSALAVEDYVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFP 231 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 M A + ++ P + L + + +E L+ K S + Sbjct: 232 MVAA--GIGISILPALALPLPEGSPLVVKRI--------TPVVERQLMLVRRKNRSLSTA 281 Query: 304 IVWLRETIKNLYASM 318 L + +++ ++ Sbjct: 282 AEALWDVVRDQGNAL 296 >UniRef50_Q7NKC0 Nitrogen assimilation transcriptional activator n=1 Tax=Gloeobacter violaceus RepID=Q7NKC0_GLOVI Length = 326 Score = 208 bits (531), Expect = 2e-52, Method: Composition-based stats. Identities = 51/313 (16%), Positives = 89/313 (28%), Gaps = 23/313 (7%) Query: 6 TTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPT 65 + LD L L S AA++ V+ +SK + L PLF + S T Sbjct: 10 SGLDSRQLQYFLALNHCGSFRLAAEQCGVSQPGLSKQIMALEGELGGPLFDRTGRRASLT 69 Query: 66 PLMVSMEQNLAEWMQMSNLLLDKPHH-QTPRGLKFELAAESPLMMIMLNALSKQIYQRYP 124 PL + P + +A + +L AL Q++P Sbjct: 70 PLGECFLPYARRAYKELEQSRAAIGELLKPDRGEICIAGLHSVNAYLLPALLAVFRQKHP 129 Query: 125 QATIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVW 183 ++L + + + VD H + L+ + V Sbjct: 130 GTQLRLTSLGSERIIKVLLDRLVDAAILMGPVHSP----------ELVSTPLYEEELVVL 179 Query: 184 LRKDHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 L HP + L P + + AL + +G +A+ L E Sbjct: 180 LPAHHPLARRPSVRLAEVAILPQVVFRDGYAMRTALVQHFRAIGATVDVAVELNTLEAFK 239 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 M Q + +A P + L ++ + L+ K N P Sbjct: 240 EMVRQE--VGVAILPLCAVQHLGTD--------LVIARLEEPSITRRVELVCRKDNYQVP 289 Query: 303 KIVWLRETIKNLY 315 + + Sbjct: 290 VVAAFTRLVAEHL 302 >UniRef50_D2B6V0 LysR family transcriptional regulator n=5 Tax=Actinomycetales RepID=D2B6V0_STRRD Length = 313 Score = 208 bits (531), Expect = 2e-52, Method: Composition-based stats. Identities = 75/312 (24%), Positives = 128/312 (41%), Gaps = 20/312 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 LDLNLL+ L L++E SV AA R+N + A+S++L ++R +DP+ V + L PTP Sbjct: 2 LDLNLLVALDALLEEGSVAGAAARLNTSAPAMSRTLGRIRRQLNDPVLVRAGRHLVPTPR 61 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQIYQRYPQ 125 + + + + ++ ++ LL P F L A L+ + L + QR P Sbjct: 62 ALELHAAVRDLVRQASALLVPAGDPAPATLARTFNLQASDMLLSALAAPLVLAVGQRAPG 121 Query: 126 ATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 ++ + A+ G VD+ + + E L + R Sbjct: 122 VVLRFLPDTLEGTSALREGRVDLEIGVIDHAAPETCV----------EPLGTGRIVGMAR 171 Query: 186 KDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMA 245 +DHP + + L F H+ + +D++L G R A+++ +L +A Sbjct: 172 EDHPLVIKGVTLRRFADAKHVGVSRHGRLHGPIDDLLAARGLRRRTAVTVSSHSMALLLA 231 Query: 246 AQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIV 305 Q D + LA AP L +PL EV + WH RN + Sbjct: 232 RQSDLVCLAPAPAD-DDLPAALGLRAFEIPLELP-------EVEVAMAWHPRNDADGGQR 283 Query: 306 WLRETIKNLYAS 317 WLR+ ++ + Sbjct: 284 WLRDQVREVLRG 295 >UniRef50_A6ARN3 Transcriptional regulator, LysR family n=4 Tax=Vibrio RepID=A6ARN3_VIBHA Length = 305 Score = 208 bits (531), Expect = 2e-52, Method: Composition-based stats. Identities = 67/320 (20%), Positives = 119/320 (37%), Gaps = 23/320 (7%) Query: 1 MKKSI--TTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNS 58 MK I +DLNLL+ L + RSV+ AA++ V+ SA+S SL++LR FDDPLF Sbjct: 1 MKDDIQWRNIDLNLLVTFSYLYRYRSVSLAAEKSFVSQSAMSHSLSRLRVLFDDPLFERK 60 Query: 59 PLGLSPTPLMVSMEQNLAEWMQMS--NLLLDKPHHQTPRGLKFELAAESPLMMIMLNALS 116 ++PT + + + +LL + I L Sbjct: 61 GHKMAPTEHAHYIAPTVHHLLDSIAKDLLTKSAFLPENYAGVCRIGLTDYAEFIFAPLLY 120 Query: 117 KQIYQRYPQATIKLRNWDYDSLDAI-TRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVL 175 +I +R P+A I N + + AI ++D+ L + + L Sbjct: 121 DEIRKRAPEAQISFINVNRSNYVAITEHDKLDVIIGSMPV----------LDDNFESQYL 170 Query: 176 FSDVPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSL 235 +++ K ++ F + + S + +D L E G R + ++ Sbjct: 171 YTEKHVCLCDKRVLKGETQLSIHAFANIEQALVSPDGSLSTQVDKKLAEHGLSRKVTVAS 230 Query: 236 PEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWH 295 F + Q + + + + Q L V P+ + +LWH Sbjct: 231 RNFLTIRNLLKQRELVAI-VPEKMAQAEGFSDDLVSVQPPIAV-------ADFDIAMLWH 282 Query: 296 KRNSHNPKIVWLRETIKNLY 315 ++ K +WLR+ + L Sbjct: 283 TSRNNEDKGIWLRQLVAELI 302 >UniRef50_C0BJQ2 Transcriptional regulator, LysR family n=1 Tax=Flavobacteria bacterium MS024-2A RepID=C0BJQ2_9BACT Length = 303 Score = 208 bits (530), Expect = 2e-52, Method: Composition-based stats. Identities = 44/310 (14%), Positives = 110/310 (35%), Gaps = 26/310 (8%) Query: 7 TLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTP 66 L+ L + ++ KA++R+ ++ +SK + +L L +S TP Sbjct: 4 QLEYRHLRYFLAVAEDLHFRKASERLFISQPGLSKQIKELEDHLGVQLLERHSRKVSLTP 63 Query: 67 LMVSMEQNLAEWMQMSNLLLDKPHHQT-PRGLKFELAAESPLMMIMLNALSKQIYQRYPQ 125 +++ L Q + +L+ +L M ++ L + +++P+ Sbjct: 64 SGSYLKEELKRSFQNLDYILEHSKLLDRGMVGNLKLGYVGSAMQHIIPNLLLKFKKQHPK 123 Query: 126 ATIKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 L+ D ++ + E+D+ F L + P + ++ + C+ L Sbjct: 124 ILFNLKEMDNQAQVEGLLSNEIDLAFVR----------LENFPRGLKANIVLREPFCLVL 173 Query: 185 RKDHPALHQTW-NLDTFLRYPHISICWEQSDTWA--LDNVLQELGRERTIAMSLPEFEQS 241 ++HP + +L F I S ++ + + + G + I+ + Sbjct: 174 PENHPIGTHNFKSLAQFKNESFILFDQRYSPSYFYKVMQLFDDSGFQPKISHNTIHSNTI 233 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 + + ++ P + + F + +++W++ N+ N Sbjct: 234 YKLVE--NYFGISIIPNSLKTDINQK--------VKFIDLNYLPHRTKLSVVWNQ-NNRN 282 Query: 302 PKIVWLRETI 311 P + + E I Sbjct: 283 PALQNILELI 292 >UniRef50_C4L1Y9 Transcriptional regulator, LysR family n=2 Tax=Exiguobacterium RepID=C4L1Y9_EXISA Length = 294 Score = 208 bits (530), Expect = 2e-52, Method: Composition-based stats. Identities = 36/309 (11%), Positives = 97/309 (31%), Gaps = 24/309 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++ + + + +S T+AA+ ++VT +SK++ L LF + T + Sbjct: 1 MEFREMQYFIAVARAKSFTRAAEALHVTQPTLSKTIRHLEQELGVELFDRQRRQIELTDV 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQ-TPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 ++ ++ L + + L + + + YP Sbjct: 61 GEALMLESELLIRQLEDLPNHVFDITNSKRGLIRLGLPPLIGSLFFTKFLTVFHSSYPNI 120 Query: 127 TIKLRNWDYDSLD-AITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 +++ +L+ A+ +GE+D+ + + + ++ +L Sbjct: 121 RVEITEAGGHTLEHALEKGELDVIATVLPTSST-----------FEETPFVTEELYAYLP 169 Query: 186 KDHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 + HP + L+ P + E S + ++ G + +++ Sbjct: 170 ERHPLASRKQLLLEELASEPFVLFTDEFSLHHVVRTACEQAGFTPRLIGESGQWDFLCMS 229 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 AQ + + PR ++ + + L ++++ L K Sbjct: 230 VAQGN--AVTILPRSIMQEMNIYGVKAILL--------KQRIPWQLGLATAKGRYLPYAT 279 Query: 305 VWLRETIKN 313 + Sbjct: 280 REFIRYLTE 288 >UniRef50_Q15Y73 Transcriptional regulator, LysR family n=1 Tax=Pseudoalteromonas atlantica T6c RepID=Q15Y73_PSEA6 Length = 302 Score = 208 bits (530), Expect = 2e-52, Method: Composition-based stats. Identities = 68/300 (22%), Positives = 116/300 (38%), Gaps = 23/300 (7%) Query: 15 CLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSMEQN 74 + L E+++T+ A +++TPSAVS S+ +LR DPLF S + PTP M Sbjct: 17 VFESLYVEQNMTRTADALHITPSAVSHSIKRLRECLGDPLFQRSNNRMLPTPACQRMAPL 76 Query: 75 LAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQIYQRYPQATIKLRN 132 + + + ++ P F + L +L AL++++ P+ T Sbjct: 77 IIDNLTRLRQIMQHWGEFQPLTSEHHFRIGMHYALEPSILPALTERLALLAPKVTFSSVR 136 Query: 133 WDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPAL 191 D + G +D+ ++ L D CV +RKDHP Sbjct: 137 VDRITLTRDLGAGHIDLALDVALPIKSPVL----------HQKLIDDEFCVLVRKDHPL- 185 Query: 192 HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQPDNL 251 D + HI + S D + Q+ G R + + + + M A ++L Sbjct: 186 RDRLTKDAYFNAEHIGVSNRSSGASVEDLLFQQQGLSRKVVIRCQNYFSAKGMVACSNHL 245 Query: 252 LLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWLRETI 311 L T PR + + + LV+LP+ ++ L WHK + + WLR Sbjct: 246 L--TVPRRIAEHLKQDDVQLVSLPV-------NIADISTHLYWHKNTEQDSALSWLRALF 296 >UniRef50_B5ELK2 Transcriptional regulator, LysR family n=2 Tax=Acidithiobacillus ferrooxidans RepID=B5ELK2_ACIF5 Length = 308 Score = 208 bits (530), Expect = 3e-52, Method: Composition-based stats. Identities = 44/324 (13%), Positives = 105/324 (32%), Gaps = 32/324 (9%) Query: 7 TLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTP 66 +L+L L + ++ ++AA+R+ ++ +S+ + L L V + ++ T Sbjct: 2 SLELRHLRYFIAVAEDLHFSRAAERLGISQPPLSQQIHTLEEMLGARLLVRTNRRVALTD 61 Query: 67 LMVSMEQNLAEWMQMSNLLLDKPHHQ-TPRGLKFELAAESPLMMI-MLNALSKQIYQRYP 124 + + + + +D + + M+ + + +P Sbjct: 62 AGEAFLKEARAILVQVDRAVDYVRSVERGEKGELHIGMTRSAMLAKQVPRAIFRFRTEFP 121 Query: 125 QATIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVW 183 + L + + +DA+ ++ +G + LP + +L++D Sbjct: 122 SVHLGLEELNSLEQIDALIHEKIQVGIMR----------VQHLPAMLQSHMLYADPLVAV 171 Query: 184 LRKDHPA------LHQTWNLDTFLRYPHISI--CWEQSDTWALDNVLQELGRERTIAMSL 235 L HP L + + I + + G I + Sbjct: 172 LPAKHPFCPISPTLSVPLDPAQLVHEQFIIFADSAGTGIRNQFYQICHDAGFNPRIVQEV 231 Query: 236 PEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWH 295 E + + A L + P Y Q + +PL ++ +++ Sbjct: 232 QEASTMIGLVAA--GLGITILPVSYSYLQQDS---VCYIPLSSPSARS-----DIHVVYR 281 Query: 296 KRNSHNPKIVWLRETIKNLYASMA 319 R H+P + L +K+ A+ A Sbjct: 282 CR-DHSPLLRQLLTILKSEAAAHA 304 >UniRef50_A9BUT0 Transcriptional regulator, LysR family n=5 Tax=Comamonadaceae RepID=A9BUT0_DELAS Length = 309 Score = 208 bits (530), Expect = 3e-52, Method: Composition-based stats. Identities = 69/323 (21%), Positives = 118/323 (36%), Gaps = 31/323 (9%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 I LDLNLL + + SV++AA+ + ++ A S+++ +LR +PLF + G+ Sbjct: 1 MDIKNLDLNLLRVFDAVYRHCSVSRAAEELGMSQPAASQAVTRLRLLLGNPLFERAHAGV 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTP--RGLKFELAAESPLMMIMLNALSKQIY 120 PTP + + + +++ + + + P +F + L L + ++ Sbjct: 61 RPTPRAERLALAVRQALEVLEVAMSEAQSFEPLQARQRFRIHLSDIGEARFLPPLMQALH 120 Query: 121 QRYPQATIKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 QR P ++ D DA+ RG +DI R+ VL SD Sbjct: 121 QRAPHVQLETLPMPLDGIADALDRGTLDIAIGFLPGGTRT-----------RQTVLLSDH 169 Query: 180 PCVWLRKDHPAL-----HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMS 234 V LR HPAL L T + ++ +LQ L + I +S Sbjct: 170 YGVLLRSGHPALAHLPEGAPLALATLRQLDFAAVRSHSET----LRILQALRLDERIRLS 225 Query: 235 LPEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLW 294 F + + D L + + + + LP +L W Sbjct: 226 AAHFMAVPSIVGKTD-LAVIMPAEIAAGFVERGGYAVRDADLP-------DHHFDVSLHW 277 Query: 295 HKRNSHNPKIVWLRETIKNLYAS 317 R P WLRE + L+ Sbjct: 278 SWRFEQEPAKRWLRELVCELFQQ 300 >UniRef50_A1W2B9 Transcriptional regulator, LysR family n=6 Tax=Comamonadaceae RepID=A1W2B9_ACISJ Length = 308 Score = 208 bits (530), Expect = 3e-52, Method: Composition-based stats. Identities = 45/315 (14%), Positives = 98/315 (31%), Gaps = 23/315 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L + + +T++A + VT S +S L +L A PLF GL + Sbjct: 1 MELRQLRYFLSVAETEHLTRSADVLFVTQSTLSHGLRQLEAELGVPLFDRLGRGLRLSQA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + A +Q + ++ + + RYP Sbjct: 61 GHAFRDHAARALQELEARRQAVADMSALQTGTLQVGVIPTFLTRFVPDAVAAFSARYPGV 120 Query: 127 TIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + +R+ + + G +D+G + + I+ E LF + + + Sbjct: 121 QLTVRDLRSGQIEELLIAGRLDLGIAFHPASRE----------EIEAEPLFEERMHLVVH 170 Query: 186 KDHPALHQ-TWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 + HP + L P + + +D + G + + + + L Sbjct: 171 QGHPLARRQRLRLAELAGVPLALLPASFATRRLIDAAFAQAGVTPLVRVEMESVDALLQA 230 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 +A ++ + A L + ++ LLW + S + Sbjct: 231 CRSGPLATIA-----AEHAALHAGPDMRAAVLTEPRTVRRA-----GLLWRRGASRSAAA 280 Query: 305 VWLRETIKNLYASMA 319 ++ A A Sbjct: 281 REFVALLRPAIARTA 295 >UniRef50_Q28M96 Transcriptional regulator, LysR family n=3 Tax=Rhodobacteraceae RepID=Q28M96_JANSC Length = 297 Score = 208 bits (530), Expect = 3e-52, Method: Composition-based stats. Identities = 49/314 (15%), Positives = 103/314 (32%), Gaps = 29/314 (9%) Query: 9 DLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLM 68 DL + +E +AA R+ + A+S+++ L A D LFV + + T Sbjct: 4 DLRQIRYFVATAEELHFRRAADRLGIAQPALSRAIQALEAELDVALFVRTNRSVQITTAG 63 Query: 69 VSMEQNLAEWMQMSNLLLDKPHHQ-TPRGLKFELAAESPLMMIMLNALSKQIYQRYPQAT 127 E + ++ +L++ R + + L +L K +R+P+ T Sbjct: 64 RVFLDGAREILTLTERMLEETRTAHDGRMGALRIGYTDFAIAGELPSLLKHFQERHPRVT 123 Query: 128 IKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRK 186 +K ++ + + G++D+GF + D V+ S+ + Sbjct: 124 LKPQHGVTQTQIRLLEEGKLDLGFVTGPI----------VRDGFDQRVVQSEALQAVVPD 173 Query: 187 DHPALHQ-TWNLDTFLRYPHISICWEQSDT--WALDNVLQELGRERTIAMSLPEFEQSLF 243 HP + T ++ + L + + G I L Sbjct: 174 SHPFAGRATLSIADLAEEDFVHGSSRDWQHFYDYLLPMCRRAGFSPRIVQEAFNTAGILG 233 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 + + + + LVA+P+ + + +W K + P Sbjct: 234 LV--SCGMGVTVL---TERVCSALGPGLVAIPI-----TDADERLVTSAIWRKDHLSGPA 283 Query: 304 IVWLRETIKNLYAS 317 R +++L A Sbjct: 284 ----RHFVEDLCAR 293 >UniRef50_Q1GX89 Transcriptional regulator, LysR family n=13 Tax=Proteobacteria RepID=Q1GX89_METFK Length = 330 Score = 208 bits (530), Expect = 3e-52, Method: Composition-based stats. Identities = 42/315 (13%), Positives = 95/315 (30%), Gaps = 28/315 (8%) Query: 6 TTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPT 65 + L+ L + + +ER+ +AA++ V+ A+S ++ KL +F S ++ T Sbjct: 27 DNMTLSELKFIVAVAKERNFRRAAEKCFVSQPALSLAVKKLEEELGVTIFERSHRDVATT 86 Query: 66 PLMVSMEQNLAEWMQMSNLLLDKPH-HQTPRGLKFELAAESPLMMIMLNALSKQIYQRYP 124 P+ + ++ S+ + + F+L +L + + + P Sbjct: 87 PIGEQIIAQAIRTLEESDRIKEIARMGNNQLAGPFKLGVIYSTGPYLLPEIIPALRRLAP 146 Query: 125 QATIKLRN-WDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVW 183 + +++ + + +D + E L+ + V Sbjct: 147 EMPLEVEENLTANLETQLRNRVIDAAIIALPFDVP----------GVRCEPLYDESFVVA 196 Query: 184 LRKDHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVL---QELGRERTIAMSLPEFE 239 + HP + + + + + + G + E Sbjct: 197 VPDIHPWAERKEIRAEELADEKVLLLNSGHCFSNQVVLACPELSRHG----EVLQGNSLE 252 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 M A NL + P + L + +P L W K + Sbjct: 253 TIRNMVAS--NLGITVLPCSAAAGRYQNPL-IRTIPFADPVPT-----RRIALAWRKGYT 304 Query: 300 HNPKIVWLRETIKNL 314 I L + I+ L Sbjct: 305 REKAIDCLLQAIRAL 319 >UniRef50_C6XR04 Transcriptional regulator, LysR family n=1 Tax=Hirschia baltica ATCC 49814 RepID=C6XR04_HIRBI Length = 302 Score = 208 bits (530), Expect = 3e-52, Method: Composition-based stats. Identities = 68/312 (21%), Positives = 123/312 (39%), Gaps = 26/312 (8%) Query: 6 TTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPT 65 LDLNLL + + +E+++T+AA ++++PSAVS +L +LRA +DPLFV + PT Sbjct: 9 DRLDLNLLKVFEAVYREQNLTRAANLLSLSPSAVSHALRRLRAHLNDPLFVKEGRIMRPT 68 Query: 66 PLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGL--KFELAAESPLMMIMLNALSKQIYQRY 123 P+ M +L + + LL P F + + ++ ++I Q Sbjct: 69 PVCARMAPDLLDEIDRLRALLQSWGKFDPAQSKIVFTIGMPDAMEIVFFPEFVEKIRQLA 128 Query: 124 PQAT-IKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCV 182 P I R + + +++ +DI + + + L +D Sbjct: 129 PNVRIISARYDRNEMVASLSGHTLDICVDIALPTSKQ----------LRHHPLTADDW-C 177 Query: 183 WLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 + K H +L HI++ T D+ L++ G R + + + +L Sbjct: 178 IVSKTHTIQ----TAADYLAQEHIAVSARTVGTVLEDSALEQRGIFRDVRVRCQNYLSAL 233 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 + + D +L R Q Q L + +P + L WH N + Sbjct: 234 AIVERSDRIL-TMPKRLAQSMIQSRPLKIQDVPFSMP-------PIELNLYWHSDNEADS 285 Query: 303 KIVWLRETIKNL 314 WLRE + + Sbjct: 286 ANKWLREIVIDT 297 >UniRef50_A3VAM0 Nodulation protein d1 n=1 Tax=Rhodobacterales bacterium HTCC2654 RepID=A3VAM0_9RHOB Length = 312 Score = 207 bits (529), Expect = 3e-52, Method: Composition-based stats. Identities = 69/323 (21%), Positives = 128/323 (39%), Gaps = 23/323 (7%) Query: 1 MKKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPL 60 M LDLNLL+ L +L++E++V++AA+++ ++ SA S +LA+LR +F+D L V Sbjct: 1 MDMRFKGLDLNLLVALDVLLREKNVSRAAEKLFLSQSATSGALARLREYFNDDLLVQVGR 60 Query: 61 GLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQ 118 + TP ++ + + + + + P + + + + +L ++ Sbjct: 61 QMVLTPRATALSGKVRSALVQIDGTIIQSPEFDPSTAVRILRIISSDFITISVLREAVRE 120 Query: 119 IYQRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSD 178 I + P TI ++ + I RGEVD+ + E F+D Sbjct: 121 IGKSAPGLTIDIQQPANKPHEKIERGEVDLLLMPEL----------YISPDHPSEQFFTD 170 Query: 179 VPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQEL--GRERTIAMSLP 236 V + T D F H ++ +E + + GRER IA+ + Sbjct: 171 DYVVIAWSGNTQFGDTITEDQFFAARHATVMFESHTPSY-EAWFIQNKDGRERDIAIVVG 229 Query: 237 EFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHK 296 F FM D L L + + L L+ P+ + ++ WH Sbjct: 230 SFSALPFMIEGTDYLAL-MHRSMADIFARQMPLRLLRCPIDIPPLVE-------SIQWHT 281 Query: 297 RNSHNPKIVWLRETIKNLYASMA 319 + + + W+RE I +A Sbjct: 282 YSDGDECLAWVREKIHEQARGLA 304 >UniRef50_B5YJV7 Transcriptional regulator n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YJV7_THEYD Length = 302 Score = 207 bits (529), Expect = 3e-52, Method: Composition-based stats. Identities = 48/308 (15%), Positives = 109/308 (35%), Gaps = 26/308 (8%) Query: 13 LLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSME 72 L + + +S +K ++ I++T AVS + L ++ LF S ++ TP + Sbjct: 6 LKVFCTVAETKSFSKTSEIIHLTQPAVSLQIQALEELYETKLFDRSSGSITLTPAGEILY 65 Query: 73 QNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQIYQRYPQATIKLR 131 + + + M + T ++ A + + +L A++ +R+P+ + + Sbjct: 66 KYAKQILTMYAEAAKEISKITGLIKGCVKIGAGTTVGNYILPAVAVDFKKRHPKIRVSVS 125 Query: 132 NWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPA 190 + L+ + +D G + + SD CV DHP Sbjct: 126 IGNAKKILEMLNSSMIDFGIISEMPGKSK----------FIVDSIISDELCVICSADHPL 175 Query: 191 -LHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRE---RTIAMSLPEFEQSLFMAA 246 ++ +L ++ P + S ++ L E G I++ L Sbjct: 176 NNQKSVSLYDVVKEPFVIREEGSSTRVIIEKFLAEHGLSVSDLHISLILGSTGSIKEAVE 235 Query: 247 QPDNLLLATAPRYCQY-YNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIV 305 + + L+ ++ L ++ L ++ K+ F ++ K +P + Sbjct: 236 R--GIGLSIVSKWAIRKEVSCGNLRILKL-------KEGKITRDFYIILPKNTILSPAVE 286 Query: 306 WLRETIKN 313 +KN Sbjct: 287 EFITYLKN 294 >UniRef50_A9BVL3 Transcriptional regulator, LysR family n=3 Tax=Comamonadaceae RepID=A9BVL3_DELAS Length = 299 Score = 207 bits (529), Expect = 3e-52, Method: Composition-based stats. Identities = 38/317 (11%), Positives = 94/317 (29%), Gaps = 26/317 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L +L +E ++AA+R++++ +S ++ +L LF + + T Sbjct: 1 MELRQLRYFLVLAEELHFSRAAQRLSISQPPLSVAIRQLEEELGAQLFERTSKEVRLTAA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHH-QTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + M+ + + + L + L + R+P Sbjct: 61 GKHLRVQAQDIMEQAQRVRQDMRAIADGVQGRIRLGFVGSAIYRGLPEALESFRARHPLV 120 Query: 127 TIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 I + + + + + +D+G + + L S+ L Sbjct: 121 RIDMLELNSAEQIAGLQQERLDLGL----------LHATRPAPGLQSHTLVSEPFMACLP 170 Query: 186 KDHPALHQT-WNLDTFLRYPHISICW--EQSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 H Q + + + + Q G + + + L Sbjct: 171 AGHALAGQRTLQVRQLAGERMVLFSRQVSPDYHQQIWQICQSEGFTPDLHHEVRHWLSVL 230 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 M + ++ P Q + L F Q + + +WH + P Sbjct: 231 SMV--SLDQGVSLVPSCLQ--------RVGFPGLAFVPIQGRHPQSQMQAMWHPGHVQ-P 279 Query: 303 KIVWLRETIKNLYASMA 319 + L +++ + Sbjct: 280 LVESLLAHLRDSVRRLG 296 >UniRef50_A8IJ97 Putative transcriptional regulator n=1 Tax=Azorhizobium caulinodans ORS 571 RepID=A8IJ97_AZOC5 Length = 324 Score = 207 bits (529), Expect = 3e-52, Method: Composition-based stats. Identities = 78/320 (24%), Positives = 125/320 (39%), Gaps = 23/320 (7%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 I D LLL + LM T AA+R+ +T S VS +L +LR DPLF P GL Sbjct: 6 NHIRRFDGALLLVFRELMATGQTTAAARRLGLTQSTVSHALRRLRDLTGDPLFQRRPDGL 65 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPR--GLKFELAAESPLMMIMLNALSKQIY 120 +PTP + + E +++S L +P P F +A + ++ L+ + Sbjct: 66 TPTPRAHELLPIVVEMLRLSQALKGEPGEFDPAASTRHFRIAGPDIVSTVLAGPLAHRFA 125 Query: 121 QRYPQATIKL-RNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 Q P A + +L+A+ RGE+D+ S+P L+ + Sbjct: 126 QHAPNARLSFGFIVGAAALEALRRGEIDMAIG----------HFPSVPRGFAASTLWEEE 175 Query: 180 PCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFE 239 RK HP +L +L H+ + + T +D VLQ LG R + S P F Sbjct: 176 FVAIARKGHPRFP-PLDLAGYLAADHVLVSFSGRFTGVVDRVLQPLGLARRVVASFPLFL 234 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 AQ D + A C+ + + L + +P+ + + Sbjct: 235 SVFDAVAQSDAVA-AVPYSLCERHAETFGLARLPMPIAVPGFPIVSV--------RRAGV 285 Query: 300 HNPKIVWLRETIKNLYASMA 319 + WL I+ + A A Sbjct: 286 PDGGYEWLEALIRRMVAEYA 305 >UniRef50_A1K8D7 Transcriptional regulator, LysR family n=1 Tax=Azoarcus sp. BH72 RepID=A1K8D7_AZOSB Length = 298 Score = 207 bits (529), Expect = 3e-52, Method: Composition-based stats. Identities = 67/318 (21%), Positives = 128/318 (40%), Gaps = 26/318 (8%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 +I ++DLNLL + + ER+V++AA R+ +T +VS L +LR F DPLFV + G+ Sbjct: 1 MNIQSVDLNLLKIFEAVYLERNVSRAAVRLELTQPSVSHGLTRLRLLFGDPLFVRTRSGV 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQIY 120 PT + + + + +++ LD+ H P F L +I L L + + Sbjct: 61 EPTVVADRIAGPVQQALRVLQTTLDEHAHFEPASSGRTFRLHMSDFGEVIFLPKLMRALL 120 Query: 121 QRYPQATIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 +R P I+ R + A+ G++D+ L + L +D Sbjct: 121 ERAPGVRIETRQLGGVELAAALDSGQIDLAIGYLPV----------LDQGFECRHLLADE 170 Query: 180 PCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFE 239 V + H + F I++ +L+E G + + +P F Sbjct: 171 YAVIAPR-HLIPSGGKGDNAFNGLDFIAVTS----HPQTLAILRECGLLDRVKLWVPHFM 225 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 + A+ + +A ++ ++ LP + + L W++R + Sbjct: 226 VVPAILAERNFAAVA-PREVVHAFSPRSRVRSFPLP-------ALQRGMDVNLYWNRRYT 277 Query: 300 HNPKIVWLRETIKNLYAS 317 +P W+RE + +L+ Sbjct: 278 GDPGHAWMRELVADLFDR 295 >UniRef50_B9XJ57 Transcriptional regulator, LysR family n=2 Tax=bacterium Ellin514 RepID=B9XJ57_9BACT Length = 301 Score = 207 bits (529), Expect = 3e-52, Method: Composition-based stats. Identities = 45/315 (14%), Positives = 100/315 (31%), Gaps = 23/315 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L + + TKAA+++ + A+S+ + L L SP G++ T Sbjct: 1 MELRHLRYFLAVADALNFTKAARQLRIAQPALSRRVQDLEDEIGVDLLKRSPRGVTLTAE 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + ++M++ +++ + + +L + +P Sbjct: 61 GKLFLEKTRQLLKMADESVEQVRALARGQFGSLHIGYAPSPTVEILPPALAAYQRAFPHV 120 Query: 127 TIKLRNWD-YDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + L + + +D + G + + + + I++E L S V L Sbjct: 121 NVLLHDASRREIVDGLQDGTLQLAVLPEVVNMEAE--------GIEFEPLRSYPYYVALS 172 Query: 186 KDHPALH-QTWNLDTFLRYPHISICWE--QSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 HP + L+ P + ++ + + LG IA+ + Sbjct: 173 PSHPLTRLKAIPLEKIANEPLVGFARHDYPDYYPFVERIFRPLGVTPKIAVECDSGSSLI 232 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 + LA + + LV P+ K E+P + K P Sbjct: 233 TAVETGRGVSLAM-----SVFKVVTGKRLVLRPVA-----GSKDEIPVGIARAKNGDLTP 282 Query: 303 KIVWLRETIKNLYAS 317 E ++ Sbjct: 283 AGEKFCEFLRKFSKR 297 >UniRef50_Q21S72 Transcriptional regulator, LysR family n=2 Tax=Comamonadaceae RepID=Q21S72_RHOFD Length = 317 Score = 207 bits (529), Expect = 3e-52, Method: Composition-based stats. Identities = 48/319 (15%), Positives = 99/319 (31%), Gaps = 29/319 (9%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 + L L + + +ER KAA+ V+ +S ++ KL D LF S ++ T L Sbjct: 1 MTLTELKYIVAVARERHFGKAAEACYVSQPTLSVAVKKLEEELDVKLFERSANEVTVTHL 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKP-HHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + ++ ++ + + + P L + +L L +Q+ PQ Sbjct: 61 GEEIVRQAQSVLEQASAIKEMAKRGKDPLAGPLTLGIIYTIGPYLLPDLVRQMISHTPQM 120 Query: 127 TIKLRN-WDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + L+ + L+ + GE+D + L+ + + Sbjct: 121 PLMLQENFTVKLLEMLRTGEIDCAILAEPFPDA----------GLAIAPLYDEPFLAVVP 170 Query: 186 KDHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVL--------QELGRERTIAMSLP 236 +HP QT + + + + + V G R + Sbjct: 171 ANHPLAAQTQVTTEQLKQETMLLLGSGHCFRDHVLEVCPEFARFSTNAEGIRR--SFEGS 228 Query: 237 EFEQSLFMAAQPDNLLLATAPRYC----QYYNQLHQLPLVALPLPFDESQQKKLEVPFTL 292 E M A + + PR + + + + + + L Sbjct: 229 SLETIKHMVAA--GMGVTLVPRLSVPKEALALKPRRKRDEDPYVKYLPFEGDPPKRRVVL 286 Query: 293 LWHKRNSHNPKIVWLRETI 311 W + + I LR I Sbjct: 287 AWRRSFTRYEAIAALRNAI 305 >UniRef50_B7GI02 Transcriptional regulator, LysR family n=2 Tax=Bacillaceae RepID=B7GI02_ANOFW Length = 304 Score = 207 bits (529), Expect = 3e-52, Method: Composition-based stats. Identities = 45/315 (14%), Positives = 105/315 (33%), Gaps = 19/315 (6%) Query: 1 MKKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPL 60 M S ++L+ L + + + S TKA++ + S+V+ + KL FD LF Sbjct: 1 MMGSGRRMNLHYLHTFREVAKWNSFTKASEMLGYAQSSVTTQIKKLEEEFDVVLFERWGG 60 Query: 61 GLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIY 120 + T + + + + + + QT + + L + Sbjct: 61 KIKLTDAGAELLEYANKIISLIDEAKQNLSEQTELAGSLSIGTIESVAGFYLPPYLQAFK 120 Query: 121 QRYPQATIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 Q++ + + L+ + + G+ D+ E ++ V+ + Sbjct: 121 QKHSKVNLLLQQNICNRLVKGVKEGKYDLAIILDEKRE---------DPDLNVIVIKQEP 171 Query: 180 PCVWLRKDHPALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEF 238 + + DH ++ I S + N+ + + L Sbjct: 172 LVLVAKPDHRLTRLDKIDIHALGDEKLIVTEQGCSYREVIGNLYRNYNIRFEYTIELGSI 231 Query: 239 EQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRN 298 E A L +A P +L + LV +P+P + ++ + L++H++ Sbjct: 232 EAIKRCVA--YGLGIAFLPLMAVE-AELEKGRLVRVPIP-----EAEIHLFLQLVYHRKK 283 Query: 299 SHNPKIVWLRETIKN 313 + + L + + Sbjct: 284 WLSQSLKQLINLLVD 298 >UniRef50_Q3SGH4 Oxidative stress transcriptional regulator n=2 Tax=Proteobacteria RepID=Q3SGH4_THIDA Length = 301 Score = 207 bits (529), Expect = 4e-52, Method: Composition-based stats. Identities = 49/293 (16%), Positives = 86/293 (29%), Gaps = 20/293 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 + L L L L +AA+ +T S +S + KL + LF S ++PTP+ Sbjct: 1 MTLQELRYLVALADHGHFGRAAEACFITQSTLSTQIKKLEDFLGVTLFDRSLKRVTPTPI 60 Query: 68 MVSMEQNLAEWMQMSNLLLD-KPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + Q + + + H Q P L L L +++++P Sbjct: 61 GREILQAARTIVDEAERIRTLAKHAQDPMTRTVHLGVIPTLGPYYLPHALTLVHRKHPGL 120 Query: 127 TIKLR-NWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + LR L+ + G++D G + E LF + L Sbjct: 121 RLLLREEMTPQILEHLADGKLDAGLLALPVTDE----------GLRVEPLFHEPFYAALP 170 Query: 186 KDHPA-LHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 DH + ++ + + + +V R + E M Sbjct: 171 ADHALAAREALSVADIMAEKLLLLDEGHCLREQALDVCGARSSGRE-EVRATSLETLRQM 229 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKR 297 L L P LV + L+W +R Sbjct: 230 V--GMGLGLTLLPALAVDAAPRQTRKLV----EIRPFRSPPPGRTIGLVWRRR 276 >UniRef50_B1Y5W5 Transcriptional regulator, LysR family n=2 Tax=Betaproteobacteria RepID=B1Y5W5_LEPCP Length = 316 Score = 207 bits (529), Expect = 4e-52, Method: Composition-based stats. Identities = 49/313 (15%), Positives = 89/313 (28%), Gaps = 23/313 (7%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 + T+ L + + S +AA+ +++TP AV+ + +L + + PLF +S Sbjct: 1 MKTVTFRQLRVFTEVARHLSFVRAAEALHLTPPAVTMQVKELESAIELPLFDREGRKVSL 60 Query: 65 TPLMVSMEQNLAEWMQMSNLLLDKPHHQTP-RGLKFELAAESPLMMIMLNALSKQIYQRY 123 T + D + + L + + Sbjct: 61 TTAGEYFLVYAKRLLSTLKEADDAMARFRKVESGVLSVGMVGT-AKYFVPQLLARFRIEH 119 Query: 124 PQATIKLRNWD--YDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPC 181 P +KL+ + + +GEVD+ GR + E + Sbjct: 120 PGIELKLQVGANREQLVALLQQGEVDLAIMGRPPREMAT----------RAEPFAAHPHV 169 Query: 182 VWLRKDHP-ALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQ 240 HP L YP I+ +D QE E IAM +P E Sbjct: 170 FIAPPGHPVLAQGRTTLSELASYPLIAREPASGTRALMDRFFQEHRVELRIAMEMPSNET 229 Query: 241 SLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 L + L L L + + + ++ + Sbjct: 230 IKQAVMAGMGLSFLSLHTI--------GLELRCGLLELVHVENAPIVRTWNIVHMQSRLL 281 Query: 301 NPKIVWLRETIKN 313 +P LR + Sbjct: 282 SPAAEALRYFMLE 294 >UniRef50_A6VX33 Transcriptional regulator, LysR family n=2 Tax=Marinomonas RepID=A6VX33_MARMS Length = 293 Score = 207 bits (529), Expect = 4e-52, Method: Composition-based stats. Identities = 43/309 (13%), Positives = 103/309 (33%), Gaps = 25/309 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +D+ LL + + S ++A ++ VT AVSK +A L + LF + T Sbjct: 2 IDIAELLTFIKVAETSSFSEAGDQLFVTQPAVSKRIASLESSLGVKLFDRIGRQVQLTEA 61 Query: 68 MVSMEQNLAEWMQMSNLLLDKPH-HQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + + + + + ++ + + L K+ + +P A Sbjct: 62 GIRLLPKARKMAEDLQDIKRSMTLQMQDVSGELRISTGHHIGLHRLPKSLKRFQENFPNA 121 Query: 127 TIKLR-NWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 +++ ++ + +G ++G + I+ ++SD + Sbjct: 122 QLEIEFVQSEEAYQDVLKGRAELGIITLSNKENPL---------IESLPIWSDPLTCVVS 172 Query: 186 KDHPALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 KDHP +L ++ + + + G + + M+ E + Sbjct: 173 KDHPLARYNNVSLIELAQHACVLPNKNTFTRQIAEQAFGKQGLKPQVRMNTNNLEILAML 232 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 + P +L ++ LP +E ++ HK+ + + Sbjct: 233 V--HIGWGWSLLPSTLVD----EKLVVLNLP-------DLNVERKLGVIHHKQRTLSRAA 279 Query: 305 VWLRETIKN 313 V E +K+ Sbjct: 280 VAFIELLKS 288 >UniRef50_Q127N6 Transcriptional regulator, LysR family n=1 Tax=Polaromonas sp. JS666 RepID=Q127N6_POLSJ Length = 328 Score = 207 bits (529), Expect = 4e-52, Method: Composition-based stats. Identities = 50/312 (16%), Positives = 91/312 (29%), Gaps = 22/312 (7%) Query: 7 TLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTP 66 + L L + + S T+AA +++T SA+S + +L + S + + Sbjct: 2 NVTLRQLRAFVAVAKSASFTEAAATLHITQSALSGLIKELEHVLGVQVVYRSTRKVQLSE 61 Query: 67 LMVSMEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQIYQRYPQ 125 + +Q + H +AA + ++ +YP Sbjct: 62 VGGEFLPLATRILQDLDEAYHAIHDLKALKSGVVRVAAPQLMACTLMPDAIAAFNSKYPA 121 Query: 126 ATIKLRNWDYDSLD-AITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 I+L + +++ + GEVD + I LF Sbjct: 122 VQIRLSDCAVEAVQSKVHSGEVDFAIGPE----------REVSPEIATHSLFEIPFVAVF 171 Query: 185 RKDHPALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 DHP + RYP IS+ E + + D + M + +L Sbjct: 172 PPDHPLGKLKRVTWTDISRYPLISLQGEYTQRLSADLQAASGNLTLSPGMEVTFMTTALS 231 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 M + + Y L+ L Q L F LL K +P Sbjct: 232 MVSAGLGVTTCLP--YATSLLNLYGLQTR-------LLQAPTLRRKFYLLTKKDRPLSPA 282 Query: 304 IVWLRETIKNLY 315 + + Sbjct: 283 AQGFSDFLLAYV 294 >UniRef50_A6UGP0 Transcriptional regulator, LysR family n=2 Tax=Sinorhizobium RepID=A6UGP0_SINMW Length = 298 Score = 207 bits (529), Expect = 4e-52, Method: Composition-based stats. Identities = 51/308 (16%), Positives = 101/308 (32%), Gaps = 22/308 (7%) Query: 7 TLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTP 66 + L L + + AA + +T SA+S + L A LF +S T Sbjct: 2 NVTLRQLQAFIAVAELGRFHLAADHLGLTQSAISILIRDLEAVLKHRLFDRHTRMVSLTT 61 Query: 67 LMVSMEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNALSKQIYQRYPQ 125 + M + + H + +AA L +L + + +RYP Sbjct: 62 AGAEFLPQARKIMSDLEIAVTNVHELANLQRGRVTIAAAIVLAATLLPPVIARFVKRYPD 121 Query: 126 ATIKLRNWDYDSLD-AITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 +++R+ + + A+ R E D+G + I VL D + Sbjct: 122 IQVQVRDMPEEEIRSALKRNEADLGIGTVSADDP----------EIQASVLMRDQLTLIC 171 Query: 185 RKDHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 R DH + I + + +D+ L G E + ++ Sbjct: 172 RSDHRFARAPQVSWANLAGEALIGLAKDNPLRGLVDHALIASGVEVKTRYEVRFSTTAIS 231 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 M A+ L +A P + + +V L + ++L +++ +P Sbjct: 232 MVAE--GLGIAILPENSRQLTTNVDVRIVDL-------VDPVISRNISILQYRQPMLSPA 282 Query: 304 IVWLRETI 311 ++E + Sbjct: 283 AAKMKEFL 290 >UniRef50_A1W235 Transcriptional regulator, LysR family n=6 Tax=Burkholderiales RepID=A1W235_ACISJ Length = 309 Score = 207 bits (529), Expect = 4e-52, Method: Composition-based stats. Identities = 43/291 (14%), Positives = 82/291 (28%), Gaps = 24/291 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L L + + +AA+R+++ +S S+ KL PLF + G+ TP Sbjct: 1 MNLRQLSQFVALAETGNFHRAAERLHMAQPPLSVSIRKLEEELGSPLFERTTTGVVLTPA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNALSKQIYQRYPQA 126 +M + + + L +L L + QRYPQ Sbjct: 61 GEAMLGDARRALFHAQQCRQAVQDAREGEGGLLRLGIIGSATYALLPQLIPSLRQRYPQI 120 Query: 127 TIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 ++L + L+ + D G P + L D + + Sbjct: 121 ELELSEATSSEILEGLVSRRFDAGLLRYPVLD---------PSGFELLPLDRDDFVLAVA 171 Query: 186 KDHPAL-HQTWNLDTFLRYPHISICWE--QSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 + P L P I S + Q G +A + + + Sbjct: 172 ESSPLAQRDAIALAEAAHEPFIMYPQHKVPSLSALAMMRCQFSGFSPRVAQEAMQVQTIM 231 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLL 293 + A L + + +V + + Sbjct: 232 SLVAS--GLGVGLVASVARQ--------VVPRGVKCLALTDNPPGFHVGIA 272 >UniRef50_Q11CG0 Transcriptional regulator, LysR family n=1 Tax=Chelativorans sp. BNC1 RepID=Q11CG0_MESSB Length = 304 Score = 207 bits (529), Expect = 4e-52, Method: Composition-based stats. Identities = 75/322 (23%), Positives = 127/322 (39%), Gaps = 24/322 (7%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 +DL L +LM+ER+V++AA ++ + +S+ LAKLRA+FDDPL V S + Sbjct: 1 MDRWKIDLFTLRGFSILMEERNVSRAAFKLGLKQPTMSRMLAKLRAYFDDPLLVWSGGHM 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGL--KFELAAESPLMMIMLNALSKQIY 120 PTP + +E + + + L P P+ LAA + L + ++ Sbjct: 61 VPTPRAILLESEIHQVLATMERLSSSPQEFDPKTSGLTIRLAATGYTENVFLARVMSEVA 120 Query: 121 QRYPQATIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 R P +++R D A+ +GEVD + + VLF+D Sbjct: 121 VRAPGVQLEIRPPDRLHDTSALEKGEVDFLVGWNVTPAPV----------LRSRVLFTDE 170 Query: 180 PCVWLRKDHPALHQ-TWNLDTFLRYPHISICWEQ--SDTWALDNVLQELGRERTIAMSLP 236 R HPAL + + ++ PH+ + L L + G + + Sbjct: 171 LVCIARAGHPALEDGNLSYERYVALPHVQFDTPSKTTTELLLHERLAQRGDRPFVQFRVQ 230 Query: 237 EFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHK 296 + A D + + R+ Y Q +QL + LP+ Q + WH+ Sbjct: 231 NLLTVAEIVANSDLIA-TVSKRFVISYLQQYQLSIAELPVRLPVMQNRAW-------WHE 282 Query: 297 RNSHNPKIVWLRETIKNLYASM 318 R P W R + + +M Sbjct: 283 RMHREPYSHWFRSLLAEIGKTM 304 >UniRef50_B2JTT0 Transcriptional regulator, LysR family n=3 Tax=Burkholderiaceae RepID=B2JTT0_BURP8 Length = 324 Score = 207 bits (528), Expect = 4e-52, Method: Composition-based stats. Identities = 70/339 (20%), Positives = 130/339 (38%), Gaps = 41/339 (12%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 S +DLNLL + ++R++ A KR++++ SA+S +LA++R D LFV + G+ Sbjct: 1 MSADRIDLNLLRVFDAIFEDRNLGLAGKRLHLSQSAISHALARMREVLGDDLFVRTGKGM 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLD-KPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQ 121 PT + M + +Q L KF +AA + ++L LS++++ Sbjct: 61 EPTMRALRMAAQVRGALQQIRAALGVDEFDPRVAQRKFVVAANDYITSLLLGRLSQRLHA 120 Query: 122 RYPQATIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 P + +R D I G +D+ + + +P + L+ Sbjct: 121 EAPLVDLVVRPSTRLDLAGQIDVGRIDMAIG----------IFADVPTRLRGTTLWEQTD 170 Query: 181 CVWLRKDHPALHQTWNLDTFLRYPHISICWEQS---------------------DTWALD 219 V L +DHP + D L +P I+I + AL+ Sbjct: 171 VVLLHRDHPIAGRAVTRDDMLAHPLIAISQGGEEEGAVGGFIVERGLARQSEMFNRDALN 230 Query: 220 NVLQELGRERTIAMSLPEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFD 279 + + MS+ + D L L + + +L + A P Sbjct: 231 RAFDDPAETPRMRMSVAHSLALPALLRHSDMLAL-VPSSLGRELQRYGELKMCATPYACP 289 Query: 280 ESQQKKLEVPFTLLWHKRNSHNPKIVWLRETIKNLYASM 318 +V +WH+RN +P + WLR+ + ++ + Sbjct: 290 -------DVAVRAVWHERNDADPALQWLRQQLADVARQV 321 >UniRef50_C4DMI0 Transcriptional regulator, COG0583 n=2 Tax=Actinomycetales RepID=C4DMI0_9ACTO Length = 458 Score = 207 bits (528), Expect = 4e-52, Method: Composition-based stats. Identities = 52/320 (16%), Positives = 104/320 (32%), Gaps = 30/320 (9%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVN--SPLGL 62 +++++L L + + +E S +AA R+ T S VS+ +A L +F P + Sbjct: 1 MSSVELRHLATMAAVAEEGSFGRAASRLRYTQSTVSQQIAALEKTIGGAVFERPGGPKPV 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQR 122 TPL + E + + L D + ++ + +++L L +++ R Sbjct: 61 RLTPLGSVVLAQGQELLAQAEALTDAVDRFKAGEGRIDIGTFQSVSIVILPRLVRRLRDR 120 Query: 123 YPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCV 182 +P I+L + ++ G++D+ F R L +++ L D + Sbjct: 121 HPGCDIRLSEDEPENP---RIGDLDLLFYDRP-----------LDGDVEHLKLIDDPYLL 166 Query: 183 WLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 R L+ P ++ ++ L G I E L Sbjct: 167 VSRNGT-FDEGPVALERLDGMPMVAWPDICD-QSRMEEALASHGVRPQIVFRTAGNEALL 224 Query: 243 FMAAQPDNLLLATAPRYC---QYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 M + A P +L + L L W + Sbjct: 225 SMVRA--GMGPALLPWLALDGTDAWSDDRLRVHQLEPAPPA-------RQIYLYWQAGRT 275 Query: 300 HNPKIVWLRETIKNLYASMA 319 H+P ++ +A Sbjct: 276 HSPLARAAIRIAGDIATEIA 295 >UniRef50_B1MJW3 Putative transcriptional regulator, LysR family n=1 Tax=Mycobacterium abscessus ATCC 19977 RepID=B1MJW3_MYCA9 Length = 295 Score = 207 bits (528), Expect = 4e-52, Method: Composition-based stats. Identities = 74/313 (23%), Positives = 121/313 (38%), Gaps = 22/313 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +DLNLL L L+QE SVT AA+R+ +P AVS+SL +LR D L V + GL PTP Sbjct: 1 MDLNLLRVLDALLQENSVTAAAERLATSPPAVSRSLGRLRRITGDALLVRAGQGLVPTPR 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTP--RGLKFELAAESPLMMIMLNALSKQIYQRYPQ 125 V + L ++ ++ +L P F + A + + L +++ P Sbjct: 61 AVQIRDELGGLLRRADQILRPGAEFDPGKLQRTFIVQAAELFLTALAVPLLERLRHDAPG 120 Query: 126 ATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + + A+ RG++DI L L + + Sbjct: 121 VNVVFAPEAREDTGALRRGDIDIELGS----------LDHLDPETRHTPVAMLPMVGVAA 170 Query: 186 KDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMA 245 +DHP + TF Y HIS+ +D L G R + + +P ++ +A Sbjct: 171 QDHPLFEGPIDAGTFATYGHISVSRRGKLYGPIDEALARHGLRRRVPVVVPSHTSAMLLA 230 Query: 246 AQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIV 305 + L A + + +PL V + WH RN+ + Sbjct: 231 RSSRLIALTVAGSV---DTAGLGIRMFDIPLELPA-------VAVGVAWHPRNNDDAAHT 280 Query: 306 WLRETIKNLYASM 318 WLR + +A + Sbjct: 281 WLRGLLIESFARL 293 >UniRef50_B7VQ63 Transcriptional regulators, LysR family n=3 Tax=Vibrionales RepID=B7VQ63_VIBSL Length = 304 Score = 207 bits (528), Expect = 4e-52, Method: Composition-based stats. Identities = 52/321 (16%), Positives = 116/321 (36%), Gaps = 25/321 (7%) Query: 1 MKKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPL 60 M + LDLNLL + + +S+T A++ + +T VS +L +L+A LF+ Sbjct: 1 MS-DMEKLDLNLLSVFLEVYRLKSITLASESLGMTQPGVSGALKRLQAQLGTDLFIREGR 59 Query: 61 GLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGLK-FELAAESPLMMIMLNALSKQI 119 G++PT + + + + + + F + + + + K Sbjct: 60 GITPTNAAMQLALRVEPALDGITSAVSTLKQFDNQQHHVFRILVNEIGLTKLQPLVEKD- 118 Query: 120 YQRYPQATIK---LRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLF 176 +I+ + + + D L +++ + D+ + + Sbjct: 119 -DTLGNISIEFNMVPSNEEDLLQSLSMQQADLAIDIHYPQVNGYMN----------QQVI 167 Query: 177 SDVPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLP 236 D + +K HP + + + HI+ +S + D + ++R ++ Sbjct: 168 EDELVLIAKKGHPRIDGSVTEAQYYHEKHITFRMRRSHLYTADYFTKNPIQQRKVSSECD 227 Query: 237 EFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHK 296 + + D + +T+ + + + QL ++ P +Q ++WHK Sbjct: 228 SLMTMCVLVSGSDCVG-STSRGFANQFAERFQLQVLEQPFEVLPMKQ-------YMIWHK 279 Query: 297 RNSHNPKIVWLRETIKNLYAS 317 R N WLR I+ S Sbjct: 280 RTDLNTAHQWLRTKIQQHMTS 300 >UniRef50_Q97DV9 Transcriptional regulator, LysR family n=1 Tax=Clostridium acetobutylicum RepID=Q97DV9_CLOAB Length = 312 Score = 207 bits (528), Expect = 4e-52, Method: Composition-based stats. Identities = 40/313 (12%), Positives = 103/313 (32%), Gaps = 24/313 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +D ++ + +E+S+++AA+R+ ++ ++S+ + +L LF + ++ T Sbjct: 1 MDFRQFEYVKTIAEEKSISRAAERLYISQPSLSQYIIRLENSLGVKLFDRTSATITLTFA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + ++N L + + + + S +L + + Y+ YP Sbjct: 61 GEKYIETARNIINLNNQLTKELNDIANLSKGRVIIGVPSQAGRYILPLVIPKFYKEYPNI 120 Query: 127 TIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 I + + + G++DI I YE + ++ + Sbjct: 121 EIIVEENIVSELEKMLLEGKIDIAILTLPVQHEK----------ITYESIMNERIFLIAP 170 Query: 186 KDHPA--LHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 K HP + + + I + Q +D++ +G + I + + + + Sbjct: 171 KKHPICSVDGRISFNFIRNEKFILLKKGQRIRLIVDDIFSRIGAKPNIILEITNLDAAYR 230 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 M + P Y + ++ LE + + K Sbjct: 231 M--ASSGMGFTIVPENVLYLLNTNG--------KENDFIIDSLEHTLVVAYRKGEYLTRA 280 Query: 304 IVWLRETIKNLYA 316 +K + Sbjct: 281 SREFIANLKGVMK 293 >UniRef50_Q1IX51 Transcriptional regulator, LysR family n=3 Tax=Deinococcus RepID=Q1IX51_DEIGD Length = 297 Score = 207 bits (528), Expect = 4e-52, Method: Composition-based stats. Identities = 42/314 (13%), Positives = 90/314 (28%), Gaps = 27/314 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L L +E +AA+R+ V A+S S+ L PL + + + TP Sbjct: 1 MELRHLRHFVALAEEEHFGRAAERVFVVQQALSNSIKNLEDEVGVPLVLRTTRRVQLTPA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNALSKQIYQRYPQA 126 E + + ++++ + + S L L + + YP Sbjct: 61 GREFLAGARETLAQAAQMVERARRAARGEVGRLTVGFVSGLAFGGLPEIVRAFRDLYPNV 120 Query: 127 TIKLRNWDYDSLDA-ITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 ++ LR +A + G++D+G LL +D L+ L Sbjct: 121 SVDLRELTAQEQEAGLRGGQIDVGL----------MLLPVRDPGLDSHPLWRQPLVAALP 170 Query: 186 KDHPALH-QTWNLDTFLRYPHISICW--EQSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 H + + + + + G + E L Sbjct: 171 AGHALARKRRLRIGDLRDERFVFFPRHLRATYFDQVMRWCGAAGFTPNVVQEAIEIPTLL 230 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKR-NSHN 301 + A + + ++ + + LP + +W + Sbjct: 231 SLVAA--GIGVFLPIQFFERLS---------LPGVVYRPLDDAPVIEIVAVWRRDEAEGG 279 Query: 302 PKIVWLRETIKNLY 315 P + + Sbjct: 280 PIVRAFLRVAQAAL 293 >UniRef50_A0K340 Transcriptional regulator, LysR family n=1 Tax=Burkholderia cenocepacia HI2424 RepID=A0K340_BURCH Length = 303 Score = 207 bits (528), Expect = 5e-52, Method: Composition-based stats. Identities = 71/320 (22%), Positives = 130/320 (40%), Gaps = 22/320 (6%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 LDLNLL+ L L+ +R +T+AA+R+N++ SA+S LAKLR +FDD L V L Sbjct: 1 MRFNRLDLNLLVTLDALLDDRRITRAAERLNLSQSAISGMLAKLREYFDDELLVPVGRNL 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNL--LLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIY 120 TPL + Q + + + +D F++A ++ ++++ L I Sbjct: 61 ELTPLARELVQPVRDLLLQVQTIVAIDPAFEPANARRHFKIATSDYVINVLMHRLIPVIE 120 Query: 121 QRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 P T++L D+ + + RGE D ++ LF D Sbjct: 121 PLAPYLTLELMP-QEDAPERLRRGEYDFLIIPEPFKADDHPAIA----------LFDDSY 169 Query: 181 CVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALD-NVLQELGRERTIAMSLPEFE 239 + + A+ + ++ + + H++ + D ++ G R + ++ +F Sbjct: 170 VGVVWNGNRAVGASIDVARYEQLDHVATLLGWPRLPSYDSRYVEAQGIRRRVRVTTSDFT 229 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 + + R + L LV L P + ++ L WH+ Sbjct: 230 SMAPVLIGTQMIA-TMHRRLATELTRRMPLRLVELEFPIPQMRE-------FLQWHEYRE 281 Query: 300 HNPKIVWLRETIKNLYASMA 319 +P WLRE I ++ A +A Sbjct: 282 KDPCHRWLREQIISVAAGLA 301 >UniRef50_B2Q0Q6 Putative uncharacterized protein n=1 Tax=Providencia stuartii ATCC 25827 RepID=B2Q0Q6_PROST Length = 295 Score = 207 bits (528), Expect = 5e-52, Method: Composition-based stats. Identities = 46/302 (15%), Positives = 98/302 (32%), Gaps = 22/302 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +D+ L ++Q ++AA+R+ VT A+S+S+ KL L V G+ T Sbjct: 1 MDIRSLRYFVEVVQLNGFSRAAERLFVTQPAISRSIQKLEQELGYTLLVRENDGVRLTDE 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQT-PRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + + ++ N + + P + + + +RYPQ Sbjct: 61 GEILLSHAKQILKQFNSMNKALKEKEGPLSGILNVGLPPVIASTYFADIIMAFSRRYPQV 120 Query: 127 TIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 +K+ + ++A+ GEV + +L D V SD + + Sbjct: 121 ELKILELGTHKMMEAMLNGEV----------ETAAVMLPFDNELFDLHVFSSDRLMLLVS 170 Query: 186 KDHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 + HP + + P I + + + G++ IA + M Sbjct: 171 EQHPLAMRNSVKFAELIDEPFIFFSEDFRINELVMSACGIYGKKPVIAGRSSHLDLVTAM 230 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 + + P + L ++ + + L L K + + + Sbjct: 231 VRA--GVGVTLLPDSMWNKTRADGLSIIPV-------IEPVLSYEVALATLKNSHQSRRA 281 Query: 305 VW 306 Sbjct: 282 KA 283 >UniRef50_Q7WJY9 Probable LysR-family transcription regulator n=1 Tax=Bordetella bronchiseptica RepID=Q7WJY9_BORBR Length = 329 Score = 207 bits (527), Expect = 5e-52, Method: Composition-based stats. Identities = 74/319 (23%), Positives = 131/319 (41%), Gaps = 23/319 (7%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 + +D+ LL L +LM ERSV++ A R++V+ AVS +LA+LR FDDPL + S G+ P Sbjct: 22 MDNIDIKLLRTLLVLMSERSVSRTADRLDVSQPAVSHALARLRILFDDPLLLRSRAGMVP 81 Query: 65 TPLMVSMEQNLAEWMQMSNLLLDKPHHQTP--RGLKFELAAESPLMMIMLNALSKQIYQR 122 T +E + + + L +P P F L+A +++ + + + Sbjct: 82 TDRASEIEARVRRLLAEYDALAHRPQPFDPSVSERHFVLSAPEYAEHLLMPPIFRHLRAH 141 Query: 123 YPQATIKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPC 181 P +++R D + + + + GEVD+ L ++ LF D Sbjct: 142 APNIRVEVRAPDPERAYELLESGEVDL----------RIAWLRKPAQSLRSMQLFQDRIV 191 Query: 182 VWLRKDHPALHQTWNLDTFLRYPHISIC--WEQSDTWALDNVLQELGRERTIAMSLPEFE 239 +DHPAL T +L FLRYPH +D ++ LG++ + F Sbjct: 192 CIADRDHPALDGTLSLADFLRYPHARPWGMGRNMSGRVIDEAVELLGKKLAPPFLVQNFL 251 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 + D L + + + ++ +PL + + WH+R+ Sbjct: 252 TIPYTITGSDLL-AVLPLVLARAFAAQQPIQILEVPLRLPRMR-------YGAYWHERSH 303 Query: 300 HNPKIVWLRETIKNLYASM 318 + WLR + + Sbjct: 304 KDVGHKWLRSVVLQAAQGL 322 >UniRef50_A6F7C1 Transcriptional regulator n=1 Tax=Moritella sp. PE36 RepID=A6F7C1_9GAMM Length = 308 Score = 207 bits (527), Expect = 5e-52, Method: Composition-based stats. Identities = 72/288 (25%), Positives = 117/288 (40%), Gaps = 19/288 (6%) Query: 25 VTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSMEQNLAEWMQMSNL 84 VT AA+R +T SA+SK+LAKLR F DPL + T ++ LA+ + + Sbjct: 24 VTAAAQRQYITQSAMSKNLAKLREIFADPLLIKMDNKSQLTEKAKQLKPELAQILNNIDG 83 Query: 85 LLDK-PHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQATIKLRNWDYDSLDAITR 143 LL +F +A+ + +L A +Y P + L WD +L A+ R Sbjct: 84 LLMTGGFDPLQSQREFTIASTDYVTDYILPAALAHLYLHAPNIKLNLTYWDKFTLAAMER 143 Query: 144 GEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPALHQTWNLDTFLRY 203 GE+D+G ++ + Y L D +R+ HP ++ L + +Y Sbjct: 144 GEIDLG----------ATIIRPEHKHLSYLPLEKDNYVCIMRQGHPLENEVLTLANYTQY 193 Query: 204 PHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQPDNLLLATAPRYCQYY 263 PH I +D L G R +A+ +P + + + A+ D+LL Sbjct: 194 PHSIITSGADKASDIDVALSAQGLFREVALRIPSYSSAFSILAKTDHLL-TIPNSIADKL 252 Query: 264 NQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWLRETI 311 Q LP+ Q ++WH R H+ WLR+ + Sbjct: 253 IIGEQFIRKDLPIKLPILQA-------AIIWHPRFDHDLAHKWLRDEL 293 >UniRef50_Q5E2I6 DNA-binding transcriptional activator n=65 Tax=Gammaproteobacteria RepID=Q5E2I6_VIBF1 Length = 323 Score = 207 bits (527), Expect = 5e-52, Method: Composition-based stats. Identities = 62/320 (19%), Positives = 121/320 (37%), Gaps = 32/320 (10%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 + +DLNLL +MQE+++T+AA+ + ++ AVS ++++L+ F+D LF+ G+ P Sbjct: 18 LRGVDLNLLTVFDAVMQEQNITRAAQNLGMSQPAVSNAVSRLKLMFNDELFIRHGRGIQP 77 Query: 65 TPLMVSMEQNLAEWMQMS-NLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRY 123 T + + + +Q+ N L +F+L+ SP + + K I + Sbjct: 78 TQRARQLFAPMRQALQLVKNELPSSTFSPETSMRQFKLSICSPSDIRFAPRIMKDIQNKA 137 Query: 124 PQATIKLR-NWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCV 182 P ++KL + D + EVD LF+D V Sbjct: 138 PHISLKLSGEHEPDIAQKLRYQEVDFVIDYVRFDEP----------GFMSTELFTDELVV 187 Query: 183 WLRKDHPALHQTWNLDTFLRYPHISICW-----EQSDTWALDNVLQELGRERTIAMSLPE 237 +HP L N + H +D +D++ ++ A Sbjct: 188 VASVNHPRLQNGINKEQLASEKHAVPARIANTKGFADHLYVDSLYEQ-------AYKGAS 240 Query: 238 FEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKR 297 L++ +Q + + +A QL ++ LP+ + L WH Sbjct: 241 ISNILYVVSQSELITVA-PKWLVNSMPNRDQLMVLPLPIE-------SKGISGYLSWHDS 292 Query: 298 NSHNPKIVWLRETIKNLYAS 317 + +W+R+ + + Sbjct: 293 YQKDKGHIWMRDQLMLICGE 312 >UniRef50_B2JL76 Transcriptional regulator, LysR family n=10 Tax=Burkholderia RepID=B2JL76_BURP8 Length = 335 Score = 207 bits (527), Expect = 5e-52, Method: Composition-based stats. Identities = 42/318 (13%), Positives = 105/318 (33%), Gaps = 28/318 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +D+ L ++ S++KAA+R+ V ++S+ + L A L + SP G++PT Sbjct: 1 MDVRQLKYFVTIVDSCSLSKAAERLFVAQPSLSQQILNLEAELKAQLLIRSPQGVAPTEA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNALSKQIYQRYPQA 126 ++ + + ++ + + + + + + ++ L +++ Q+YP Sbjct: 61 GKALYRLSRDVLRRMDQIRQEVQDGGGSESGTVAIGFPTTIASVLAAPLFQRVRQKYPGI 120 Query: 127 TIKL-RNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 +++ + + + G +D+ R++ + LF + V Sbjct: 121 RLQIFESMSGYITELLANGRLDLAILFRDTESL----------GVSVHPLFDEDLYVV-- 168 Query: 186 KDHPALH-----QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQ 240 HP + L P ++ ++ + I + Sbjct: 169 -GHPVSKLCVDDEVCPLKFLGNVPLVTPGPTNGLRLLIERTFSRADVDLNIVADIDSLPT 227 Query: 241 SLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 L +A + A + + P + + P +L W+ Sbjct: 228 MLDIAESGVACTVLPASALARRHFNNRP--------PIRKIVDPGMNRPASLCWNNAVPT 279 Query: 301 NPKIVWLRETIKNLYASM 318 +R + L A + Sbjct: 280 IAATQVVRSAMIELIAEL 297 >UniRef50_A6ULR6 Transcriptional regulator, LysR family n=1 Tax=Sinorhizobium medicae WSM419 RepID=A6ULR6_SINMW Length = 307 Score = 207 bits (527), Expect = 6e-52, Method: Composition-based stats. Identities = 47/311 (15%), Positives = 94/311 (30%), Gaps = 20/311 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L +++ + +AA+++ T A+SKS+ ++ + L V S G++ T Sbjct: 1 MELRDLQYFEVIATTGHIGRAAEKLGRTQPALSKSVRRIESEIGTKLLVKSGRGVALTTA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQT-PRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 M + L + + + + +L + +I + P Sbjct: 61 GRVMLERARSLRMSVEQNLREMADIAKGAVGNVRVGSGATTAEYLLPLVCSRILREAPGI 120 Query: 127 TIKLRNWDYDSLD-AITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 ++ D L A+ G+VDI S L D V Sbjct: 121 KFEISIGMNDVLRTALNDGKVDIVVGPVTKGDES---------NYTVHRLGEDSVVVAAA 171 Query: 186 KDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGR-ERTIAMSLPEFEQSLFM 244 + HP + + Y + +D E +A+ S + Sbjct: 172 RGHPLTRKKATIADLQDYGWVLPARSVVTRQWIDAAFASRDLSEPDVAIQTNNISLSPRL 231 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 A D LL + R L ++LP + + + + P + Sbjct: 232 IAPTD-LLTFISRRNLGRGRVGEPLVEISLP-------ETTMHREVVAVHRNSSYMPPAV 283 Query: 305 VWLRETIKNLY 315 +K Sbjct: 284 ERFIAILKQEA 294 >UniRef50_A6GDN8 Transcriptional regulator n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GDN8_9DELT Length = 318 Score = 207 bits (527), Expect = 6e-52, Method: Composition-based stats. Identities = 45/318 (14%), Positives = 86/318 (27%), Gaps = 26/318 (8%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 ++ L L L L + + A++ V+ A+SK + ++ LF + + Sbjct: 1 MNLP--TLRQLEYLVALAETGHFGETARQCGVSQPALSKQVREVEGLLGLTLFERARPRV 58 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQIYQ 121 TP + + + L+ + L + L L ++ + Sbjct: 59 IVTPAGEDIVARARRVLAGARELVSAADAWSGARRGTLRLGVIPTIAPYGLPGLLAKLRE 118 Query: 122 RYPQATIKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 YP+ + + D LD + G VD+G + L + Sbjct: 119 LYPEVSYAIHELQTDVLLDQLRAGAVDLGLLAHPFDAA----------GLAGPDLVVEPF 168 Query: 181 CVWLRKDHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFE 239 + K HP + I + V G +++ Sbjct: 169 VLVAPKGHPLATRGALEPEEITGASLILMQDGHCLRDQAIEVCALAGPPPPTSVAAASVS 228 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 + M L P + LV TL W Sbjct: 229 TLVRMVES--GLGATLLPASALPVEVRNNQGLVVRGFAKPPP-----GRTLTLQWRAS-- 279 Query: 300 HNPKIVWLRETIKNLYAS 317 +P W + I ++ S Sbjct: 280 -SPHAQWFAD-IADVLRS 295 >UniRef50_B0TNB6 Transcriptional regulator, LysR family n=19 Tax=Shewanella RepID=B0TNB6_SHEHH Length = 303 Score = 207 bits (527), Expect = 6e-52, Method: Composition-based stats. Identities = 51/321 (15%), Positives = 96/321 (29%), Gaps = 34/321 (10%) Query: 3 KSITT-----LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVN 57 + +D+ L L L+ S TKAA+R+N+ A+S+S+ +L L Sbjct: 1 MQLRKIDRVDMDIRQLKYLDALITAGSFTKAAERLNMAQPALSQSIKRLEQELGVTLVDR 60 Query: 58 ----SPLGLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIML 112 S LS T ++ Q+ ++ + +A L L Sbjct: 61 GANKSSKTLSLTAEGSALHQHAKLIIKNMAQAEAHIKSMANLTMGEVRVAVPGMLGSFYL 120 Query: 113 NALSKQIYQRYPQATIKLRN-WDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAID 171 R+P+ + L D+L + +VDI + L D Sbjct: 121 PRRLMAFRHRHPELKLSLFEGGTRDTLKMLQNEDVDIAIIT----------ANDLTDEFD 170 Query: 172 YEVLFSDVPCVWLRKDHPALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERT 230 +L + V + ++HP L+ F ++ + + ++LG Sbjct: 171 SHLLLQEQMVVAVGREHPLAKSDAVTLEEFFQHELVFFKPGYFHREWMLEQAEQLGLTAN 230 Query: 231 IAMSLPEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPF 290 IA + AQ + T + P+ Sbjct: 231 IAFETNLINLIKQVVAQE--YGITTVLEMVIEKHDNICAKPFIPPIFL----------DL 278 Query: 291 TLLWHKRNSHNPKIVWLRETI 311 + W K+ + E + Sbjct: 279 HIAWKKQRPISQADRAFVEFL 299 >UniRef50_A8GI93 Transcriptional regulator, LysR family n=3 Tax=Enterobacteriaceae RepID=A8GI93_SERP5 Length = 292 Score = 207 bits (527), Expect = 6e-52, Method: Composition-based stats. Identities = 47/292 (16%), Positives = 93/292 (31%), Gaps = 22/292 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L + + +E+S T+AA+R + SA+S +AKL LF + + T Sbjct: 1 MNLKQIRFALAVAEEQSFTRAAQRCHTVQSALSHQIAKLEEELGCTLFERTSRRVRLTTA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDK-PHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + Q + L+++ + S + I L ++ YP Sbjct: 61 GQAFIQPAQRLLAAKQALVEEVVAASGTVSGTLTIGTISTINAIDLTEKLGNFHRHYPAV 120 Query: 127 TIKL-RNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 I+L L+ + + + D+ F G + + L + + Sbjct: 121 NIRLYVGMSEALLEDVRQQKTDVAFVGLWPGDIDMLP-------VSHRQLTDEPLVALVA 173 Query: 186 KDHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 HP Q NL T P + D Q G +R ++ + E + Sbjct: 174 TQHPLASRQRVNLQTLSEVPLVDFYSGTGARRQTDRAFQAAGIKRHVSFEIDHIEWLENL 233 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHK 296 + + Q + LV++P+ +W + Sbjct: 234 VRRGLAAGIVPI-STAQRLSS-----LVSIPIE------DGPRRQVYCVWPQ 273 >UniRef50_A1WMY5 Transcriptional regulator, LysR family n=1 Tax=Verminephrobacter eiseniae EF01-2 RepID=A1WMY5_VEREI Length = 304 Score = 206 bits (526), Expect = 7e-52, Method: Composition-based stats. Identities = 76/317 (23%), Positives = 139/317 (43%), Gaps = 23/317 (7%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 + +DLNLL+ Q L++ER+V++AA+R+ ++ SAVS +L +LR F D L V P G+ Sbjct: 1 MGLRQIDLNLLVTFQALVEERNVSRAAERLALSQSAVSHALKRLRNTFQDELLVRGPRGM 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFE--LAAESPLMMIMLNALSKQIY 120 PTP V++ + + +D+ P L+ + ++ + + Sbjct: 61 EPTPRAVTLAIAVKSGLATIETAVDEKRSFDPATCHSTYYLSVTEYVRPFIMAHMCAYVR 120 Query: 121 QRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 + P + + D + + + R +L + P+ LF D Sbjct: 121 EAAPHVRLVFESPDEHQVGS--------AVAYEGLQIRLADLPVNGPME--SMRLFDDTF 170 Query: 181 CVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQ 240 V +R++HP Q L+ +L+ HI + + A+D L R + + +P + + Sbjct: 171 AVAMRREHPFAEQELTLEKYLQLAHIKVT--GVGSSAIDRALTARSLVRDVVVKMPNWLE 228 Query: 241 SLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 +L + D L++A + + LPL ++P WH RNS Sbjct: 229 ALEVVECTD-LVVAMPNHWTRLGRLPRCCITRPLPLAL--------QMPIDAAWHPRNSS 279 Query: 301 NPKIVWLRETIKNLYAS 317 +P VWLRET++ +A+ Sbjct: 280 DPAHVWLRETVRQAFAA 296 >UniRef50_B8CTJ9 Regulatory protein, LysR:LysR, substrate-binding n=1 Tax=Shewanella piezotolerans WP3 RepID=B8CTJ9_SHEPW Length = 295 Score = 206 bits (526), Expect = 7e-52, Method: Composition-based stats. Identities = 49/320 (15%), Positives = 105/320 (32%), Gaps = 28/320 (8%) Query: 1 MKKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPL 60 M I L C L++ + T+AA+++++T ++K + +L PL + + Sbjct: 1 MNIQIKN-----LHCFVTLVEMGNYTRAAEKLHLTQPTLTKMIQRLEENLGQPLLIRNNQ 55 Query: 61 GLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNALSKQI 119 + T ++ + + + L + + + L + +++ L Q Sbjct: 56 KVIATEAGRALICTSQQIVGQWHRLREDLNSLNGLQTGQLRLGVCPMMGEMII-ELVAQF 114 Query: 120 YQRYPQATIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSD 178 ++YP + ++ + A+ +D+ F+ + D L Sbjct: 115 RKKYPGVELSIQELGGFGAEQALLNDSLDLTFTALPTTHT---------QEFDSLELRGY 165 Query: 179 VPCVWLRKDHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPE 237 L K+HP YP I + S T + + + E +A + Sbjct: 166 PLLACLPKEHPLAEKDNIGWQDLAPYPFILYNDDFSLTKLIHRLSRSANVELNVAAQSGQ 225 Query: 238 FEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKR 297 ++ M + +A P+ L AL + +L L+W K Sbjct: 226 WDFIAAMVEAK--MGVAILPKPICQKVNSDSLVYKAL--------KPQLTWDLALIWRKN 275 Query: 298 NSHNPKIVWLRETIKNLYAS 317 P + L A+ Sbjct: 276 LPLTPAASTFINLSRELSAT 295 >UniRef50_P73123 Probable RuBisCO transcriptional regulator n=81 Tax=cellular organisms RepID=RBCR_SYNY3 Length = 345 Score = 206 bits (526), Expect = 7e-52, Method: Composition-based stats. Identities = 49/311 (15%), Positives = 92/311 (29%), Gaps = 21/311 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 L+ L L+ + E S +AA + V+ AVS + L PLF T Sbjct: 6 FTLDQLRILKAIASEGSFKRAADTLYVSQPAVSLQVQNLEKQLSVPLFDRGGRKAQLTEA 65 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + + + + A +L + Q+YP Sbjct: 66 GHLLLNYGEKIITLCQETCRAIEDLQNLQGGTLIVGASQTTGTYLLPRMIGMFRQQYPDV 125 Query: 127 TIKL-RNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 T++L + + + G+VD+ G E +E L+ LP D + L Sbjct: 126 TVQLQVHSTRRTAWGVANGQVDLAIIGGEVPAELQETLTVLPY-------AEDELALILP 178 Query: 186 KDHPALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGR---ERTIAMSLPEFEQS 241 HP +T + + IS+ + + +D VL + I M L E Sbjct: 179 VLHPLAQAETIQKEDLYKLKFISLDSQSTIRKVIDKVLSQGEIDTKRLKIEMELNSIEAI 238 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 L A + L + ++ +++ + + Sbjct: 239 KNAVQS--GLGAAFVSTTAIEKELEMNV------LHIAPIKNVEIRRVLSVIINPNRYRS 290 Query: 302 PKIVWLRETIK 312 + Sbjct: 291 KASAAFIREVL 301 >UniRef50_C3NNS3 LysR family regulatory protein CidR n=22 Tax=Vibrio RepID=C3NNS3_VIBCJ Length = 302 Score = 206 bits (526), Expect = 7e-52, Method: Composition-based stats. Identities = 42/310 (13%), Positives = 90/310 (29%), Gaps = 25/310 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +D+ L L+ ++S TKA++R+ VT +SK + L + PL T Sbjct: 11 MDIRALRYFVELVNQQSFTKASERLFVTQPTISKMIRNLEQELEQPLLHREGRRFWLTEA 70 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + Q + + L + L + + L +Q Q YP Sbjct: 71 GEIVYQRAQQILTQMQQLDAELTDLNQLHRGHLRLGIPPMVGHVY-ARLFRQYRQTYPNV 129 Query: 127 TIKLRN-WDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + + AI G++D+ + L + ++ L + Sbjct: 130 ELTVVEYGGRKIEQAILDGDIDVAVT---------MLSPNQHPDLNTVALDHYPIFAVVP 180 Query: 186 KDHPALHQ--TWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 D P T + P E + + + Q G +A +++ + Sbjct: 181 -DIPLWRSLTTLTWAQISQEPFYLFTHEFTLSDHIHTCCQAAGYTPQVAARSSQWDFLVA 239 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 + + + P Q + ++ ++WH+ + Sbjct: 240 LVKS--GVGVCFLPAPLCQRIQGDGV--------LIYPITPAIDWRLGVVWHRERYVSKT 289 Query: 304 IVWLRETIKN 313 + Sbjct: 290 AEAWIALCRR 299 >UniRef50_Q4FSR3 Transcriptional regulator, LysR family n=3 Tax=Gammaproteobacteria RepID=Q4FSR3_PSYA2 Length = 304 Score = 206 bits (526), Expect = 7e-52, Method: Composition-based stats. Identities = 67/311 (21%), Positives = 127/311 (40%), Gaps = 25/311 (8%) Query: 7 TLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTP 66 LD+ L L L+ +++++ A+++ +T A+S+ L KLR DD LF+ + TP Sbjct: 16 RLDIKQLRVLHALLDLQNLSQVARKMGLTQQAISEQLRKLRDLLDDRLFIRQGNSMVATP 75 Query: 67 LMVSMEQNLAEWMQMSNLLLD-KPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQ 125 +SM+Q + + ++ +LL+ + F ++A +L L + P Sbjct: 76 KALSMQQPIGDILKQLEVLLEPEVFTPQTYKGVFTISATDYATQALLPQLFNITRREAPD 135 Query: 126 ATIKLRNWDYDSLDAI-TRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 + +R++ D+++ + GE+D+ + E +P + Y LF + Sbjct: 136 LRLIVRDFASDNINQLIAAGELDLLITFPE----------FIPDNLSYVTLFEEQHLCVT 185 Query: 185 RKDHPALHQTWNLDTFLRYPHISICW-EQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 + + L +P + + + + D E G +R I MS+P F Sbjct: 186 GYKNTFATDIFTLAQVAAHPQLVVSPSRANLRGSHDQWFAEKGLKRHIVMSVPSFSAVPD 245 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 + D +A P N++ +L + ALP WH R S + Sbjct: 246 ILHTTDM--IAFYPSRLLPNNKVKELKVEALP----------PTFKVIAAWHPRTSDSGI 293 Query: 304 IVWLRETIKNL 314 WL E ++NL Sbjct: 294 HRWLIEQLQNL 304 >UniRef50_Q74DH4 Transcriptional regulator, LysR family n=1 Tax=Geobacter sulfurreducens RepID=Q74DH4_GEOSL Length = 302 Score = 206 bits (526), Expect = 7e-52, Method: Composition-based stats. Identities = 44/310 (14%), Positives = 84/310 (27%), Gaps = 23/310 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L +E + T+AA R++++ AVS+ + +L LF GL T Sbjct: 1 MELRHLRYFAATAEELNFTRAANRLHISQPAVSRLIKELECELGAQLFTRERFGLRLTAA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQAT 127 +Q + K + S M L+ ++ Q P Sbjct: 61 GEKFLFYARRVLQDCEEGIRAVRENGLNHQKLTIGFISTAMESFLSDALVRLSQERPDID 120 Query: 128 IKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRK 186 + + D + A+ ++D+GF G + VL L Sbjct: 121 VTVNEMSPGDQIAALRYRQIDLGFIGNPHDGAG--------DEFELYVLREVPLVAVLPV 172 Query: 187 DHPALHQT-WNLDTFLRYPHISICWE--QSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 H ++ + I + + G + + L Sbjct: 173 RHRLAGRSEICIGELEGDTFIGYLEDKFPGRNRVISTACARAGFRPKFELKAGSLIEVLG 232 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 M + P + F + V W N++ P Sbjct: 233 MI--GTGKGVCLMPSDVAGLP--------HPNVAFIPLRDPLDPVRLAAAWLPGNTN-PA 281 Query: 304 IVWLRETIKN 313 + L + Sbjct: 282 LHQLIAILAA 291 >UniRef50_A4XTW7 Transcriptional regulator, LysR family n=1 Tax=Pseudomonas mendocina ymp RepID=A4XTW7_PSEMY Length = 309 Score = 206 bits (526), Expect = 7e-52, Method: Composition-based stats. Identities = 48/308 (15%), Positives = 93/308 (30%), Gaps = 22/308 (7%) Query: 2 KKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLG 61 + L + + SVT+AA+ +++ +VS LAKL LF Sbjct: 5 RFHTRQTTFRQLETFLAVAEHLSVTEAARTLHLAQPSVSTQLAKLEQALQMELFEQLGKR 64 Query: 62 LSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQIY 120 L T ++ E + L + + L A ++ L Sbjct: 65 LYLTDAGREVQAGAREIFDALDRLEMRLAQLNGLTTGQLRLGAV-TTAKYLVPRLLGPFC 123 Query: 121 QRYPQATIKL-RNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 ++YPQ ++L D + + D+ + L ++ L + Sbjct: 124 RQYPQVEVQLNIANRSDVIRCLEDNRDDLYVFSQPPD----------HLDLECVALAENP 173 Query: 180 PCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFE 239 V H Q + + P +S A+++ G M++ E Sbjct: 174 LVVIAPAGHRLSGQRIRWEQLAQEPFLSREPGSGTRLAIEDHFARHGWPYKPHMTIASNE 233 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 A L +A R+ + + L V L + + L+ +R + Sbjct: 234 AIKESVAA--GLGIAILSRHTLIHTAVGNL--VELDVEDFPIANQW-----YLVRWRRKA 284 Query: 300 HNPKIVWL 307 +P Sbjct: 285 LSPAAQAF 292 >UniRef50_Q9F1R2 HTH-type transcriptional activator cmpR n=38 Tax=Bacteria RepID=CMPR_SYNE7 Length = 323 Score = 206 bits (526), Expect = 8e-52, Method: Composition-based stats. Identities = 42/318 (13%), Positives = 90/318 (28%), Gaps = 22/318 (6%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 + L L+ L + + S T+AA+ + +T VS + +L PLF L Sbjct: 1 MKNLTLHQLKVFEAAARHSSFTRAAEELYLTQPTVSIQVKQLTKAVGLPLFEQIGKRLYL 60 Query: 65 TPLMVSMEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQIYQRY 123 T + + + + L + LA + L QRY Sbjct: 61 TEAGRQLYKTTRQVFEQLEQLDMTIADLQGMKQGQLRLAVI-TTAKYFIPRLIGPFCQRY 119 Query: 124 PQATIKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCV 182 P + L+ +++ ++ I D+ R I + + V Sbjct: 120 PGINVSLKVTNHEGLINRINDNLDDLYVLSRPPSG----------FDITVQPFLDNPLVV 169 Query: 183 WLRKDHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQS 241 HP +Q +L+ + P I A + + + + L E Sbjct: 170 VGPASHPLANQRGISLERLAQEPFILRERGSGTREATEQLFAAHNLNLNVKLDLGSNEAI 229 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 L + + +L + + + + + ++ + Sbjct: 230 KQAILGGLGLAV-LSYHTLTSAGATPELKMFEV-------EGFPIHRQWHAVYPAGKQLS 281 Query: 302 PKIVWLRETIKNLYASMA 319 + + +A Sbjct: 282 TVAATFLDYLLTESQRIA 299 >UniRef50_Q5QVJ9 Transcriptional regulator, LysR family n=1 Tax=Idiomarina loihiensis RepID=Q5QVJ9_IDILO Length = 331 Score = 206 bits (526), Expect = 8e-52, Method: Composition-based stats. Identities = 71/316 (22%), Positives = 134/316 (42%), Gaps = 25/316 (7%) Query: 4 SITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLS 63 ++ +LDLNLL+ L L++E+ VT+AA+R+ ++ A S +L + R FDDPL + Sbjct: 29 NLRSLDLNLLVILHALLEEQHVTRAARRLALSQPATSNALDRCRHIFDDPLLERVAGEMR 88 Query: 64 PTPLMVSMEQNLAEWMQMSNLLLDKPH-HQTPRGLKFELAAESPLMMIMLNALSKQIYQR 122 T S+++ L++ + +++ P T L +I++ L ++ Sbjct: 89 LTAKAQSLKEPLSQALLAITAIVEIPKVELTQVRQTVRLIMADQPGLIVMTHLLTKLSTS 148 Query: 123 YPQATIKLRNW--DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 P+ + L W D+L + GE DI S +LP + + + Sbjct: 149 APKVNLSLLPWRSSKDALHRLENGEADIAIST----------FPALPPKFYRQQIAYESY 198 Query: 181 CVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQ 240 V +R HPA + +N D +L +PHI + E + +++ VL + G+ R + +P F Sbjct: 199 VVAMRASHPAAQK-FNADEWLAWPHIVVSGEGNARGSVEEVLAQQGKVRHVGAVVPNFTM 257 Query: 241 SLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 + D + + L + P+ L WH R Sbjct: 258 IDPLIKATDMIATTPM----NCLSDPQGLAIFEPPIAVP-------GFSLHLAWHARRDS 306 Query: 301 NPKIVWLRETIKNLYA 316 + + + ET+++L+ Sbjct: 307 DLVVKHVIETLQHLFQ 322 >UniRef50_Q5NYN4 Transcriptional regulator n=4 Tax=Rhodocyclaceae RepID=Q5NYN4_AZOSE Length = 306 Score = 206 bits (526), Expect = 8e-52, Method: Composition-based stats. Identities = 41/273 (15%), Positives = 87/273 (31%), Gaps = 19/273 (6%) Query: 11 NLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVS 70 L + + S T+AA+ + +T AV+ + +L F+ L +S TP Sbjct: 4 RRLQVFSAVAKHGSFTRAAEHLFMTQPAVTFQIKQLEEHFNTRLLERGHGKVSLTPAGEV 63 Query: 71 MEQNLAEWMQMSNLLLDKPHHQ-TPRGLKFELAAESPLMMIMLNALSKQIYQRYPQATIK 129 + + +S L + G + + + L L ++ +YP+ + Sbjct: 64 VLAYADRILDLSEELESRVSELTDELGGTLSIGTSTTIAAYWLPKLLERFKHKYPRVIPR 123 Query: 130 LRNWDYDSLD-AITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDH 188 + + + + E+D+G S + E ++ D V R H Sbjct: 124 VVVGNSQLTEDRVAARELDLGLIEIVSEQPAIERFTA----------ARDELLVICRPGH 173 Query: 189 PAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGR---ERTIAMSLPEFEQSLFM 244 P L + I+ + + G E + L ++ Sbjct: 174 PLASKSRLTAHDLLDHAFITRDPGNAIRELAEQFFAAAGIGIDEVNVCAELGSLATVKYL 233 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLP 277 + +A + + + LV++PL Sbjct: 234 VGEGIGFAIA---SFAAIQRDIREERLVSVPLE 263 >UniRef50_B6R6F6 Transcriptional regulator, LysR family n=1 Tax=Pseudovibrio sp. JE062 RepID=B6R6F6_9RHOB Length = 320 Score = 206 bits (526), Expect = 8e-52, Method: Composition-based stats. Identities = 42/293 (14%), Positives = 88/293 (30%), Gaps = 20/293 (6%) Query: 10 LNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMV 69 L L + L + S +KAA+ +T S +S S+ +L L S L T Sbjct: 11 LKQLQYFKTLAKHLSFSKAAEACFITQSTLSASIKQLEGILGCELLDRSGRTLVLTEAGE 70 Query: 70 SMEQNLAEWMQMSNLLLDKPHHQT-PRGLKFELAAESPLMMIMLNALSKQIYQRYPQATI 128 S+ + + ++ + L+ Q P +F L + +L Q+ YP+ + Sbjct: 71 SVLEKASLLLRDAEDLVQGVQAQNKPLCGRFRLGVIPSVAPFLLPRFLPQLRDLYPELQL 130 Query: 129 KLRN-WDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKD 187 LR + + A+ G +D + + SD + + Sbjct: 131 FLREDISRNLMIALREGRIDAALMALPYDTT----------GFESAEIGSDAFYLAVPGA 180 Query: 188 HPALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAA 246 HP ++ + + + + + M Sbjct: 181 HPLAGLSEVLMEDLANEVLLLLEDGHCLRNHVLAAAGGRMLTANEDVQATSLSTLVQMV- 239 Query: 247 QPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 + + + PR + L + K ++W +++S Sbjct: 240 -DNGIGVTLVPRIAVDADIDRGTSLK-----LIKIADPKARRTIGMVWRRKSS 286 >UniRef50_C0WB23 Transcriptional regulator n=1 Tax=Acidaminococcus sp. D21 RepID=C0WB23_9FIRM Length = 298 Score = 206 bits (526), Expect = 8e-52, Method: Composition-based stats. Identities = 46/315 (14%), Positives = 107/315 (33%), Gaps = 26/315 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 + L LL + L + T+AA+ ++++ ++S S+A+L LF ++ TP Sbjct: 1 MTLLQLLYFETLARVLHYTRAAEELHISQPSLSYSIAELEKELGVSLFKREKRKIALTPY 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQ-TPRGLKFELAAESPLMMIMLNALSKQIYQ--RYP 124 + + M + + L + ++ + K +Y+ Sbjct: 61 GERFLPYVKKTMALLEEGKATLRQMKDKAPMNIRLGYFHSISASLVPPIVKALYEEKENQ 120 Query: 125 QATIKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVW 183 + ++ + + G++D+ F+ ++ PL + + Sbjct: 121 DIRFQFMEDTSYNICEQLKNGKLDLAFTTGRDEALDGVTMTKQPLYLTVYL--------- 171 Query: 184 LRKDHPALHQ-TWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 +HP + + F + P + + S LD + + + E +L Sbjct: 172 ---EHPLAKKNSVTFADFAKEPMVLLNKTSSLRAQLDQAFIKRSMIPNMVFEVQECNTAL 228 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 A ++ P + +VA+P+ +++ L W K +P Sbjct: 229 QYVA--LKFGVSILPEVPAMQTE----RVVAIPI---NENEQEFFRTVYLSWDKTRPLSP 279 Query: 303 KIVWLRETIKNLYAS 317 + +R I YA+ Sbjct: 280 VVKKVRNWIVQHYAA 294 >UniRef50_Q2CK92 Transcriptional regulator, LysR family protein n=1 Tax=Oceanicola granulosus HTCC2516 RepID=Q2CK92_9RHOB Length = 309 Score = 206 bits (526), Expect = 8e-52, Method: Composition-based stats. Identities = 65/319 (20%), Positives = 129/319 (40%), Gaps = 18/319 (5%) Query: 2 KKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLG 61 ++ +D +LL LM+ R T+ A+ + +T AVS +L +LR ++DPLF+ G Sbjct: 6 HVNLRLIDTTVLLIFLSLMRHRKATEVAREMGLTQPAVSHALKRLRTLYEDPLFLRRAHG 65 Query: 62 LSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGLK--FELAAESPLMMIMLNALSKQI 119 L PT L +E + +++ + L+ P P + A + ++ L+ ++ Sbjct: 66 LEPTALAHELEPKIRRIVRLLSQTLENPDQFDPASTATDLRIGAFDYELTTVIPKLAAEM 125 Query: 120 YQRYPQATIKLRNWD-YDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSD 178 P + ++LDA+ G +D+ + RS E L+S+ Sbjct: 126 RTLSPSINVHAYPLVYTEALDALVHGRLDLAIGYFDIPLRSEAT-------FVVEDLYSE 178 Query: 179 VPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEF 238 + R+ HP L L+ + H+ + +D L+ G +R I +P Sbjct: 179 RYVLAGRRGHPLLSDNPTLEEMAQADHLLVSPHGLIRNRVDEALRMQGYQRNIRTVVPSL 238 Query: 239 EQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRN 298 +L + + ++ R Q + LP+ + + H R+ Sbjct: 239 FAALSIIENSELVM-TLPERVAVGNWQPFDIVHKPLPIDV-------GDFQLQAVRHARD 290 Query: 299 SHNPKIVWLRETIKNLYAS 317 +++P WL E ++ + +S Sbjct: 291 ANSPLHAWLLENLRRIVSS 309 >UniRef50_Q2T940 Transcriptional regulator, LysR family n=6 Tax=Burkholderia RepID=Q2T940_BURTA Length = 395 Score = 206 bits (526), Expect = 8e-52, Method: Composition-based stats. Identities = 45/325 (13%), Positives = 108/325 (33%), Gaps = 33/325 (10%) Query: 2 KKSITTLD----LNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVN 57 ++++ ++ L + L + + R+ T+AA+ ++++ SA+S+ + +L LF Sbjct: 78 RRNMKSMQRNPLLRNICYLLAVDEHRNFTRAAEALSISQSALSQKIRQLEDELGAQLFDR 137 Query: 58 SPLGLSPTPLMVSMEQNLAEW---MQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNA 114 S + T + + + L+ H + + ++ Sbjct: 138 SGRVVQLTDFGGVYLEYARRAHSDLLTAQRALNDVHDL--SRGQLRIGFTPTFTEYLIAP 195 Query: 115 LSKQIYQRYPQATIKLRNWDYDSLD-AITRGEVDIGFSGRESHPRSRELLSSLPLAIDYE 173 + + ++RYP I++ D+++ A+ +VD+ F + I+ E Sbjct: 196 VIEHFHERYPGIVIEMTEMSLDAVETALGDDQVDLAFGFVDVRSD----------EIEAE 245 Query: 174 VLFSDVPCVWLRKDHPAL--HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTI 231 LF + + HP D P + + +D+ Q + + Sbjct: 246 ALFPERLMLVAGATHPLTTQRDPITPDQLAETPLALLTTSFVSRFYIDSYFQSYDMKPNV 305 Query: 232 AMSLPEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFT 291 A+ L + + + P ++ ++ Q + P P Sbjct: 306 ALQANSISAVLKIVRRGK--IATILPGTIEFEHRDLQYVPLDPPFPV---------RTVA 354 Query: 292 LLWHKRNSHNPKIVWLRETIKNLYA 316 LL K +++ L Sbjct: 355 LLRRKGAYRTVAATAFAASVRALLD 379 >UniRef50_C3JEG8 Transcriptional regulator, LysR family protein n=2 Tax=Rhodococcus erythropolis RepID=C3JEG8_RHOER Length = 291 Score = 206 bits (526), Expect = 8e-52, Method: Composition-based stats. Identities = 35/305 (11%), Positives = 81/305 (26%), Gaps = 25/305 (8%) Query: 13 LLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSME 72 L +L + + VT A +++ +S+ LA+L LF L + Sbjct: 7 LEWFVVLAETQQVTATADLTHLSQPTLSRKLARLERQIGVTLFDRQGRRLELNRYGEILY 66 Query: 73 QNLAEWMQMSNLLLDKPHHQT-PRGLKFELAAESPLMMIMLNALSKQIYQRYPQATIKLR 131 ++ ++ + + P L ++ + + +P +L Sbjct: 67 RHARIALRALDAAQTEIQSLASPESGTVRLDFLHSFGTWLVPHMLRGYRVEHPGVRFELH 126 Query: 132 NWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPA 190 +D I G D+ + + + + + DH Sbjct: 127 QDSAQFLVDRIATGTSDLAVVSPQPRDPQVAWM----------QIAQQSLALAVPADHRF 176 Query: 191 LH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQPD 249 + L P I + LD + G E + + Sbjct: 177 AKLHSVELADAADEPFIGMHPNFGMRRILDELCAAAGFTPNFVFESSELATVGGLVSASF 236 Query: 250 NLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWLRE 309 + + + +V +P+ + L+W K + R+ Sbjct: 237 GVSVMPV-----QDPPIWAEGVVYVPVE-------GAQRKIGLIWSKSRELSDPARTFRD 284 Query: 310 TIKNL 314 ++ Sbjct: 285 YVERT 289 >UniRef50_B4RWU1 Transcriptional regulator n=2 Tax=Alteromonas macleodii RepID=B4RWU1_ALTMD Length = 347 Score = 206 bits (525), Expect = 9e-52, Method: Composition-based stats. Identities = 63/306 (20%), Positives = 123/306 (40%), Gaps = 22/306 (7%) Query: 15 CLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSMEQN 74 +M E ++T+AA R+++T AVS +L+++R ++D LFV G+ PT ++ Sbjct: 2 IFDAIMTEGAITRAADRLSMTQPAVSNALSRMRTAWNDELFVKDGRGIQPTSFAKNLWSQ 61 Query: 75 LAEWMQMSNLLLDKP-HHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQATIKLRNW 133 + + + ++ + F +AA ++ ++ L K I P I Sbjct: 62 IQGPLGELEVAVNPTDFNPASAKRTFRIAATDNIVSMVWGPLRKVIENEAPGINIHAIP- 120 Query: 134 DYDSLDA--ITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPAL 191 +YD + E ++ FS + I E + V +R DHP Sbjct: 121 NYDMETDKILKDAEAELTFSKYQEPGSV----------IRAEHVLDPSWVVVMRPDHPLA 170 Query: 192 HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQPDNL 251 +L+ F+ H+ + + D VL LG R +AMS+ +F + + + + + Sbjct: 171 KSQLSLEDFVAADHLLVSVTGDVSGPTDQVLANLGLRRRVAMSVNQFHNATPLLKESNLI 230 Query: 252 LLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWLRETI 311 +A + +L + P+ + P +++WHKR + + WLR + Sbjct: 231 CVA-PSLVMEKEIFSGELAVFETPIEI-------VSSPLSVMWHKRQDQDAGLQWLRGLV 282 Query: 312 KNLYAS 317 Sbjct: 283 VKFIRE 288 >UniRef50_C6B2W9 Transcriptional regulator, LysR family n=4 Tax=Rhizobiaceae RepID=C6B2W9_RHILS Length = 334 Score = 206 bits (525), Expect = 9e-52, Method: Composition-based stats. Identities = 69/329 (20%), Positives = 131/329 (39%), Gaps = 33/329 (10%) Query: 2 KKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLG 61 ++ +DLNLL+ + +M+ER V ++ +R+N++PSA+S L +LR DPLF+ +P G Sbjct: 4 HIDLSRIDLNLLVLFETVMEERHVGRSGQRLNLSPSAISHGLGRLRMLLGDPLFLKTPKG 63 Query: 62 LSPTPLMVSMEQNLAEWMQMSNL--LLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQI 119 + PT + +A+ + +P +F + A + + L L + Sbjct: 64 VVPTDRAEELAAPIADILARVRSVVATAEPFDPAHSQRRFTIGAPDGVSSVFLPPLLDLL 123 Query: 120 YQRYPQATIKLRNWDY------------DSLDAITRGEVDIGFSGRESHPRSRELLSSLP 167 + P I +R D+L A+ ++DI + P Sbjct: 124 AKFAPGIAISVRQLLPKQGEPSPDLAWRDALAALEARDMDIAIIP----------QAGFP 173 Query: 168 LAIDYEVLFSDVPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGR 227 + +L+ + + R+ HP L L T+ H+ + +DN+L G Sbjct: 174 IRFASLLLYEEDFVIAARQCHPFLIDQ-TLATYCAAQHLVVSHLGDTHGFVDNLLASHGC 232 Query: 228 ERTIAMSLPEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLE 287 R +A+++P F +L + A+ D + A R+ + + + V PLP Sbjct: 233 SRRVALTVPNFMLALAVLAETDFIS-ALPRRFVEMHAARFGVVSVNPPLPL-------GR 284 Query: 288 VPFTLLWHKRNSHNPKIVWLRETIKNLYA 316 K + + WL ++ Sbjct: 285 FAINATAPKAAIRDEGVAWLVRLLQASMD 313 >UniRef50_B9IRL1 HTH_1, Bacterial regulatory helix-turn-helix protein, lysR family n=23 Tax=Bacillus RepID=B9IRL1_BACCQ Length = 310 Score = 206 bits (525), Expect = 9e-52, Method: Composition-based stats. Identities = 37/310 (11%), Positives = 95/310 (30%), Gaps = 26/310 (8%) Query: 7 TLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTP 66 +D+ L ++ +E+ +T+AA+R+++ +S+ L+ L LF + + T Sbjct: 20 DMDIRKLRYFIVIAEEKQLTRAAQRLHMAQPPLSRQLSLLEQELSVNLFERNGRNMYLTE 79 Query: 67 LMVSMEQNLAEWMQMSNLLLDKPHH-QTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQ 125 + + + + K + A + L+ + YP Sbjct: 80 EGNILYTKAKNIILQLEETITEIKDTGEGLRGKLSIGAFHSCIP-FLSEKIRYFQDNYPN 138 Query: 126 ATIKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 +K+ ++ + +++ + L + + + Sbjct: 139 VNLKIWEGGPSYLIEKLENRHIELAILRTPFNKDV----------FSSICLSKEPFVLVM 188 Query: 185 RKDHPALHQ--TWNLDTFLRYPHISICWE--QSDTWALDNVLQELGRERTIAMSLPEFEQ 240 H L P + + + S + + + LG IA P+ Sbjct: 189 PAKWELYHSHLPIPLTELSHIPLLLLHKDKENSYHQLVIDECKHLGITLNIACECPDSAF 248 Query: 241 SLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 L + + + P+ + + +V L + F + +++W K Sbjct: 249 ILMLIMT--GIGASILPKSAVSHIPQEFIKIVDL-IDFPYESES------SIIWLKGRKL 299 Query: 301 NPKIVWLRET 310 + + E Sbjct: 300 SKRAQRFIEC 309 >UniRef50_A6W2N0 Transcriptional regulator, LysR family n=1 Tax=Marinomonas sp. MWYL1 RepID=A6W2N0_MARMS Length = 310 Score = 206 bits (525), Expect = 9e-52, Method: Composition-based stats. Identities = 71/319 (22%), Positives = 131/319 (41%), Gaps = 23/319 (7%) Query: 4 SITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLS 63 S+ LDL L L L++ER+V +AA R+ ++ SA+S+ L +LR FDDPLF+ + G+ Sbjct: 5 SLQHLDLKSLTGLLYLLEERNVGRAADRLYLSQSAMSRLLNRLRDAFDDPLFIRTSKGMV 64 Query: 64 PTPLMVSMEQNLAEWMQMSNLL-LDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQR 122 PT +++E L ++ L + F + + A+++Q Y+ Sbjct: 65 PTSKALALEAPLKLMLEQLAGLWTESEFQPQSSYRTFRMQTTHYQAQAYMPAIAEQFYRE 124 Query: 123 YPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCV 182 P A+++ SL +D+ LP + + +L + Sbjct: 125 APFASLETSTLTETSLLNQAEHSLDLALCSDYI---------QLPNSFEKHLLGREKFRC 175 Query: 183 WLRKDHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQS 241 + +H + LD +L Y H+ + S+ D +L E RER A P + Sbjct: 176 VMSANHALAMKDSITLDDYLAYSHVLVNLGGSNPVISDALLGERARERHFAFRTPYMLAA 235 Query: 242 LFMAAQPDNLL--LATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 L + L+ P + + Q L + LP+ F + + W K Sbjct: 236 LETVGRTSLLMSNSGLLP---ERFQQQFGLVIKDLPMDFPF-------IHYYSSWPKSVE 285 Query: 300 HNPKIVWLRETIKNLYASM 318 ++P ++W R+ + + + Sbjct: 286 NDPGVIWFRDICERVVKGL 304 >UniRef50_Q46MT9 Regulatory protein, LysR:LysR, substrate-binding n=1 Tax=Ralstonia eutropha JMP134 RepID=Q46MT9_RALEJ Length = 334 Score = 206 bits (525), Expect = 9e-52, Method: Composition-based stats. Identities = 69/319 (21%), Positives = 120/319 (37%), Gaps = 21/319 (6%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 LDLN L+ L L+ RSV KAA+R+ ++ A S SLA+LR +F+D L V Sbjct: 1 MRFNKLDLNQLVVLDALLSTRSVGKAAERLFLSQPATSCSLARLREYFEDDLLVAVGKTQ 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPR--GLKFELAAESPLMMIMLNALSKQIY 120 TPL + + + + + + + P +F + + ++ + L+ + ++ Sbjct: 61 VLTPLALGLRKPVRDVLLQIQTITRARPSFDPATSTRRFIIESSDYVISVFLSQVIRRAA 120 Query: 121 QRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 + P LR + + + GE ++ + ++ E LF D Sbjct: 121 EAAPLMQFDLRAISPQTPEHLESGEAELLIAPE----------FAMVPGHPSEPLFEDTF 170 Query: 181 CVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELG-RERTIAMSLPEFE 239 + D ++T+ HI + W D+ L G R R + P F Sbjct: 171 SCLVSADSTVGQDGLTVETYFDAAHIGVEWGGGRRVTFDSRLIATGKRTRRQDVIAPSFT 230 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 + + D + R + Q L V P+ + L W K Sbjct: 231 LVPALLSGTDRIA-TLPTRLAEQMAQRFGLRRVTCPIDLPAFSE-------HLQWQKYQE 282 Query: 300 HNPKIVWLRETIKNLYASM 318 +P IVWLRE ++ M Sbjct: 283 SDPAIVWLRELLRETAREM 301 >UniRef50_D0YA85 Transcriptional regulator, LysR family n=5 Tax=Klebsiella RepID=D0YA85_KLEVA Length = 308 Score = 206 bits (525), Expect = 1e-51, Method: Composition-based stats. Identities = 46/314 (14%), Positives = 111/314 (35%), Gaps = 19/314 (6%) Query: 7 TLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTP 66 + + + + +E S+ A++ + V+ A++K++ +L LFV G++ T Sbjct: 10 QIKFHHIRAFVEVAREGSIRGASRALAVSQPALTKAIKELEEGLSAQLFVRRSQGVALTE 69 Query: 67 LMVSMEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNALSKQIYQRYPQ 125 S Q+ + ++ D+ + + + + + ++ ++ + +Q++PQ Sbjct: 70 NGESFYQHASLILEELRAAQDELLQRQGEQAGQINIGLGASVARSLMPSVICRFHQQHPQ 129 Query: 126 ATIKLRNWD-YDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 +++ ++ + +GE+D + +E LF V+ Sbjct: 130 VKVRIMEGQLLAMINELRQGELDFTINTYYPG--------PYDHEFSFEKLFEKPFAVFA 181 Query: 185 RKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 R HPA T +L + + S L + L + G + + F + + Sbjct: 182 RAGHPAAQAT-SLGELMDHHWTMPTPRGSYFKQLQDRLNQAGLAPKVDIVCETFSSCISL 240 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 + D L + +L PL+A L + + L+ + P Sbjct: 241 VVKSDFLSILPV--------ELGNDPLMADKLVMIPVRDVLPTATYYLIQRRDTRQTPLT 292 Query: 305 VWLRETIKNLYASM 318 L + + Sbjct: 293 ASLITLFRRQSRQL 306 >UniRef50_UPI0001BCF0E5 transcriptional regulator n=1 Tax=Selenomonas noxia ATCC 43541 RepID=UPI0001BCF0E5 Length = 303 Score = 206 bits (525), Expect = 1e-51, Method: Composition-based stats. Identities = 51/315 (16%), Positives = 106/315 (33%), Gaps = 24/315 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L Q++ R T+AA+ ++VT A+S+S++KL D LF S + T Sbjct: 1 MELAQLKYFQVMANIRHFTRAARMLDVTQPALSRSMSKLEKDLDVRLFKRSDGEIELTQE 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQT-PRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + + ++ + + +F+L+ L +L + + YP Sbjct: 61 GARLLRRVDRILREVESAKREASNLQVGSSTEFKLSFIHSLGSYILPHILRDFQAIYPDI 120 Query: 127 TIKLRNWDYDSLDA-ITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 I L D ++ + GE D+ L+S+ V + Sbjct: 121 QIHLNQQDSTAMPQVLAAGESDLCLCSALPMTEHSAWAY----------LWSEELFVAVP 170 Query: 186 KDHPALHQ-TWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 HP + + NL I++ S +D G I + + Sbjct: 171 LGHPFADRVSINLHELEYESFIALKNNYSLRILVDQFFDLAGIHPEITFEGGDISTLSGL 230 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 + L ++ P L +P+ F + + W+ + P Sbjct: 231 VSA--GLGISILP----KPTGFEHPELRYIPISFPLCK-----RALGVAWNTQRQLPPAA 279 Query: 305 VWLRETIKNLYASMA 319 V ++ + + ++ Sbjct: 280 VNFQQFLIRRFDDVS 294 >UniRef50_C7GBJ0 Transcriptional regulator, LysR family n=1 Tax=Roseburia intestinalis L1-82 RepID=C7GBJ0_9FIRM Length = 298 Score = 206 bits (525), Expect = 1e-51, Method: Composition-based stats. Identities = 44/312 (14%), Positives = 94/312 (30%), Gaps = 25/312 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L L + + TKAA + +T ++S ++++L A LF S + T Sbjct: 1 MNLFQLRYFVTLAKMQHYTKAAHELCITQPSLSHAISQLEAELGVALFEKSGRNTTLTSF 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYP--Q 125 + + + L L + + L+ + +P Sbjct: 61 GEEFLICANRTLATLDSGVSSLQRSARGDGLIRLGMLRSLGVSFIPQLAARYLASHPEHD 120 Query: 126 ATIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 D ++ ++ + D+ F S +D + + + + Sbjct: 121 VRFTFHTGSTGDLVNGLSARDYDLIFCSMPPETES----------LDTVPITHEDLVLIV 170 Query: 185 RKDHPA-LHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 HP Q+ L L YP I +D++ ++ IA E E Sbjct: 171 PGHHPLAAKQSVALTETLIYPQIYFSHGSGMRAVVDHLFSQINAVPQIAYETEEAEVIAG 230 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 + AQ + + L+ L + + E ++ ++ P Sbjct: 231 LTAQGFGIAVVPYMDL-----------LLKLDVKILQISAPVWERNLYMIHDRQAFMPPA 279 Query: 304 IVWLRETIKNLY 315 + E + Sbjct: 280 VRNFCEFVLKEC 291 >UniRef50_B0V4K3 HTH-type transcriptional regulator n=13 Tax=Acinetobacter RepID=B0V4K3_ACIBY Length = 299 Score = 206 bits (525), Expect = 1e-51, Method: Composition-based stats. Identities = 36/313 (11%), Positives = 99/313 (31%), Gaps = 26/313 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L + +E + +KAA ++ ++S+ + L L + + T Sbjct: 1 MELRHLRYFITVAEELNFSKAALKLYTAQPSLSQQIKDLEEDVGVRLLNRTKRKVELTEE 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRGLK-FELAAESPLMMIMLNALSKQIYQRYPQA 126 ++ + ++ + + + + M + + + ++P Sbjct: 61 GEVFLEHARLTLAQADKAVAMARQVSKAKQQLLRIGFVPIAEMKIFPYVLPNLRLQHPDL 120 Query: 127 TIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 TI+L + + + L A+ RGE+DI F+ + I + + ++ L Sbjct: 121 TIELSSLNNAEQLKALKRGELDITFTRDNTEND----------EIQSQFVLTEPLIFLLP 170 Query: 186 KDHPALH-QTWNLDTFLRYPHISI--CWEQSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 ++HP + I + + + G + I ++ Sbjct: 171 RNHPLAKYDHIPVKALHGIDFIIPAAEQSNTLHNTILEFTKTHGIDLNIVQKADSILLNI 230 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 L P Y + + + L + + + + K N+ + Sbjct: 231 NSI--GSGLGCTILPAYVAPLGVSNTV-VRPLDVELP-------SLDLFVSYRK-NTESV 279 Query: 303 KIVWLRETIKNLY 315 + + + ++ Sbjct: 280 GVKRFIDQLNKVF 292 >UniRef50_A0AYH9 Transcriptional regulator, LysR family n=148 Tax=Proteobacteria RepID=A0AYH9_BURCH Length = 326 Score = 206 bits (525), Expect = 1e-51, Method: Composition-based stats. Identities = 38/255 (14%), Positives = 83/255 (32%), Gaps = 15/255 (5%) Query: 6 TTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPT 65 + ++L L + +ER+ T+AA+R+++ +S+ + +L PLF + L T Sbjct: 20 SNMELRHLRYFVAVAEERNFTRAAERLHIAQPPLSRQIQQLEEALGVPLFERTARPLKLT 79 Query: 66 PLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQ 125 + + + + L + + ML + ++ YP Sbjct: 80 DAGRFFYSHAVQLLAQTTELESMTKRVGKIERSMSVGFVGSTLYGMLPKIIRRFRSEYPA 139 Query: 126 ATIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 + L D + A+ G +D+GF + ++ VL + V L Sbjct: 140 VELSLHEMSTMDQIKALKEGRIDVGFGR----------IRHEDPSVRRVVLREERMIVAL 189 Query: 185 RKDHPA--LHQTWNLDTFLRYPHISIC--WEQSDTWALDNVLQELGRERTIAMSLPEFEQ 240 H +L + I S + + + E + Sbjct: 190 PVGHVLDSAKPVLSLHDLVNDTLIIFPKAPRPSYADQVLAAFHDRALQPRRIYETRELQI 249 Query: 241 SLFMAAQPDNLLLAT 255 +L + A + + + Sbjct: 250 ALGLVAMGEGVSVVP 264 >UniRef50_A4Z170 Putative transcriptional regulatory protein, LysR-family n=1 Tax=Bradyrhizobium sp. ORS278 RepID=A4Z170_BRASO Length = 313 Score = 206 bits (525), Expect = 1e-51, Method: Composition-based stats. Identities = 78/321 (24%), Positives = 128/321 (39%), Gaps = 27/321 (8%) Query: 1 MKKS----ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFV 56 MK + +DLNLL+ + L+ ER+VT+AA R+ + + SK+L +LR F DPLF+ Sbjct: 1 MKNDQMPSLAHVDLNLLVLFEALLSERNVTRAAVRVGLAQPSASKALDRLRHLFGDPLFL 60 Query: 57 NSPLGLSPTPLMVSMEQNLAEWMQMSNLLLDK--PHHQTPRGLKFELAAESPLMMIMLNA 114 +P G+ PTP + + +A ++ L+ P LA ++L Sbjct: 61 RAPGGMRPTPRALELAPEIALVLERVRALVAAELPFDPATARGSLRLAMSDAAEFVLLPG 120 Query: 115 LSKQIYQRYPQATIKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYE 173 L Q+ P T++ R D D + G +D + LP Sbjct: 121 LVAQLAGTAPGVTLQARPLDKDRVFAELDEGRLDAVVG----------VFRELPKRFRSA 170 Query: 174 VLFSDVPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAM 233 LF + R DHP L L+T++ PH+ + A+D+ L+ +G R +A Sbjct: 171 PLFEERFVCLARADHPRLATGLTLETYVELPHLLVTLRDDRKGAVDDALEAIGLHRRVAA 230 Query: 234 SLPEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLL 293 +L F + A D + R+ L PL ++ L+ Sbjct: 231 TLTRFLALPPVLAFSDAIA-TVPSRFAA--ASAPNCRLHEPPLALPRWTEQ-------LV 280 Query: 294 WHKRNSHNPKIVWLRETIKNL 314 W P I W + I++ Sbjct: 281 WRAGAEREPMIAWGLQLIRSA 301 >UniRef50_B9Z947 Transcriptional regulator, LysR family n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z947_9NEIS Length = 330 Score = 206 bits (525), Expect = 1e-51, Method: Composition-based stats. Identities = 71/319 (22%), Positives = 124/319 (38%), Gaps = 23/319 (7%) Query: 2 KKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLG 61 ++ LDLNLL+ LMQER V++AA R+ + A+S +LA+LR DDPLFV S Sbjct: 8 HDALRRLDLNLLVAFDALMQERHVSRAAARLFLGQPAMSHALARLRQLLDDPLFVRSGSR 67 Query: 62 LSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQI 119 + PTP + + W++ + L + P F LAA + ++ AL + Sbjct: 68 MEPTPRACELAPQVRAWLEQAQQFLFRADAFDPAAAHATFRLAAPDGMEALLYPALIATL 127 Query: 120 YQRYPQATIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSD 178 + P ++ + L A+ EVD+ + R LF Sbjct: 128 RRDAPGVRLRSQLLETDQQLAALDHDEVDLLITAAPLALRD---------WHSRLRLFKS 178 Query: 179 VPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEF 238 + L + L H+ + + +D++ G ER + + Sbjct: 179 DFISVHSRRQLPLPEPATLADLASCDHVVSSYRGTAAGVVDHLFAAHGLERRVQVLSASL 238 Query: 239 EQSLFMAAQPDNLLLATAPRYCQ-YYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKR 297 + AQ + + P + ++ +L LP + + L+WH+R Sbjct: 239 LAIGHIVAQAPLM--SIQPAIYRGLFSTTPELACAPLP--------GEARITVGLVWHRR 288 Query: 298 NSHNPKIVWLRETIKNLYA 316 N +P +LR+T+ Sbjct: 289 NDRHPLHRYLRDTVIAAMR 307 >UniRef50_Q7NCX0 LysR family transcriptional regulatory protein n=1 Tax=Gloeobacter violaceus RepID=Q7NCX0_GLOVI Length = 301 Score = 205 bits (524), Expect = 1e-51, Method: Composition-based stats. Identities = 47/312 (15%), Positives = 109/312 (34%), Gaps = 23/312 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++ L + + + T+AA++++++ AVS ++A L ++ PLF + T Sbjct: 1 MNFEQLRVFVAVAEHLNFTRAAEKLSLSQPAVSSAVAALETYYKVPLFNRMGRRIELTNS 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + +Q + K + + + + L ++ Q+YP+ Sbjct: 61 GQLLLTEAHKVIQEITTIESKLRETKSLQRGELYIGSSQTVASWWLPPQLQRFRQQYPKV 120 Query: 127 TIKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 +K+ + + + + + + G+VDIG RE +S + + + D + Sbjct: 121 QLKVVSGNTEEIGEWVAAGQVDIGLVEREVRNKS----------LTFNAIGGDKMAFVVG 170 Query: 186 KDHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGR---ERTIAMSLPEFEQS 241 K HP +T LD + + + + IA+ LP + Sbjct: 171 KQHPLWERTNIGLDELKSTRWVLRESGSDVRKFFEYLCFTHNIDADKLDIALELPNCAMT 230 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 A + L + P + + L + + +E F L+ + Sbjct: 231 KRAAEVGAGVALLSVP-LVEKEIKWGALR------SLNTVLKPVMERNFYLISRNSQVTS 283 Query: 302 PKIVWLRETIKN 313 P + ++ Sbjct: 284 PAVKAFSSLVRQ 295 >UniRef50_Q1YX76 Transcriptional regulators, LysR family protein n=1 Tax=Photobacterium profundum 3TCK RepID=Q1YX76_PHOPR Length = 309 Score = 205 bits (524), Expect = 1e-51, Method: Composition-based stats. Identities = 67/309 (21%), Positives = 122/309 (39%), Gaps = 25/309 (8%) Query: 14 LCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSMEQ 73 +L QE ++ KA++R+ V+ A+S++L KLR FDD LFV + GL PT + Sbjct: 15 RTFVILSQELNMRKASERLFVSQPAISQALLKLRNHFDDELFVKTRHGLKPTAFGEELMD 74 Query: 74 NLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQIYQRYPQATIKLR 131 ++ M + L+ P +A ++ + + L I + P + L Sbjct: 75 SINPVMDELSSTLNCSQDFDPADLNGSIRIALAPHILTYLSSKLFHAIRKDAPNVDVHLL 134 Query: 132 NWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPAL 191 NW +L+ + +GE+ IG + + P + + + D +++RKDHP Sbjct: 135 NWSPTTLEDLNKGEIAIGVNFD---------IHHAPKELIRKKVGDDTFIIYVRKDHPIN 185 Query: 192 HQTWNLDTFLRYPH--ISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQPD 249 + + Y + I S+T + V++ G I L + D Sbjct: 186 KEMISPKDVKGYEMANLIIPDWNSNTSQAERVMKSHGLSVRIGFRSELPMAVLDVVRHTD 245 Query: 250 NL--LLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWL 307 + P + +L + + K + P +H++N NP +WL Sbjct: 246 MVYPSTTFVPE--RELRELRGMKV--------SIDGKDITFPIIAYYHQKNKRNPTTLWL 295 Query: 308 RETIKNLYA 316 + I NL Sbjct: 296 HKLINNLLQ 304 >UniRef50_A8SVR7 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=A8SVR7_9FIRM Length = 291 Score = 205 bits (524), Expect = 1e-51, Method: Composition-based stats. Identities = 41/310 (13%), Positives = 92/310 (29%), Gaps = 25/310 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L+ + L + T AA+ +N+T ++S ++++L LF + T Sbjct: 1 MNLSYIRYFVELAHVQHYTNAARNLNITQPSLSHAISQLEEELGVMLFEKNGRNTELTAF 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQI--YQRYPQ 125 + + ++ + L PL M + L+ + Sbjct: 61 GREFLACAERSLGTLDAGVESIQKEAAGDGVIRLGLIRPLGMEFVPRLAAEYLKKAENRN 120 Query: 126 ATIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 + LD + + D+ F R + + V Sbjct: 121 VSFTFHTGTTGQLLDDLAARKYDMVFCSRPPET----------MGFSAIPVGRQDLVVIA 170 Query: 185 RKDHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 HP + L LRY H+ +D + + LG+ IA E E Sbjct: 171 PSGHPLADRDSVTLGDTLRYKHVYFSKGSGMRSLVDEMFEGLGKAPEIACETEEDEVIAG 230 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 + A + + + L + + + ++ + ++ R +P Sbjct: 231 LVATGFGIAVVPYMDMLKR-----------LDVKVLSIKHQPVDRLYYVVHDSRTYMSPV 279 Query: 304 IVWLRETIKN 313 + + + Sbjct: 280 ATKFHKYVLS 289 >UniRef50_Q2T4U0 Transcriptional regulator, LysR family n=2 Tax=Burkholderia RepID=Q2T4U0_BURTA Length = 299 Score = 205 bits (524), Expect = 1e-51, Method: Composition-based stats. Identities = 53/315 (16%), Positives = 105/315 (33%), Gaps = 21/315 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++ L +++ SVT A+ R++V+ A+++ + L LF P G+SPT Sbjct: 1 MNFTHLSAFLAVVEAGSVTGASARLHVSQPALTREIRDLEERLGVVLFDRRPRGMSPTEA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + +++ + +LAA + +L + RYP Sbjct: 61 GRLLAGYAKRIFALTDEAEAALDEFSGLVRGNLKLAASRTIGSYLLPPVLDVFCDRYPGV 120 Query: 127 TIKLRNWDYDSLD-AITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 TI + + + ++ A+ E +GF + D V D Sbjct: 121 TIDVAEMNTELVEAALLTYERQLGFVEGAYDTTA----------FDSMVFGRDTLLAVAA 170 Query: 186 KDHPALHQ-TWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 HP + + +S A++ E G E +S+ E + Sbjct: 171 SSHPLARKHRVGVQDIADCDVLSREPGSGTRNAVETAFAEHGLEFAPRLSVGSAEAMNRL 230 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 + + + +L LV L + +E T++WHK + +P Sbjct: 231 LLRGNAIAWV---SRFTIEAELEAGALVPLRV-----TDMTVERDLTIIWHKGATLSPSA 282 Query: 305 VWLRETIKNLYASMA 319 R+ + + A Sbjct: 283 RIFRDLLVEQARARA 297 >UniRef50_P77744 HTH-type transcriptional regulator abgR n=48 Tax=Enterobacteriaceae RepID=ABGR_ECOLI Length = 302 Score = 205 bits (524), Expect = 1e-51, Method: Composition-based stats. Identities = 40/311 (12%), Positives = 108/311 (34%), Gaps = 19/311 (6%) Query: 7 TLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTP 66 + ++ + + ++ S+ A++ +N++ A+SKS+ +L LF G++ T Sbjct: 4 QVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTD 63 Query: 67 LMVSMEQNLAEWMQMSNLLLDKPHHQTP-RGLKFELAAESPLMMIMLNALSKQIYQRYPQ 125 S Q+ + ++ + + + + + + ++ A+ + +Q++PQ Sbjct: 64 AGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQ 123 Query: 126 ATIKLRNWD-YDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 +++ ++ + +GE+D + +E L ++ Sbjct: 124 VKVRIMEGQLVSMINELRQGELDFTINTYYQG--------PYDHEFTFEKLLEKQFAIFC 175 Query: 185 RKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 R HPA+ ++ L Y S L +L + + + + F + + Sbjct: 176 RPGHPAIGAR-SIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISL 234 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 A+ D L L ++ + + + + L+ + + P Sbjct: 235 VAKSDFLS-KLPEEMGCDPLHGQGLVMLPV-------SEILPKAAYYLIQRRDSRQTPLT 286 Query: 305 VWLRETIKNLY 315 L + Sbjct: 287 ASLITQFRREC 297 >UniRef50_Q0A8N9 Transcriptional regulator, LysR family n=4 Tax=Gammaproteobacteria RepID=Q0A8N9_ALHEH Length = 336 Score = 205 bits (524), Expect = 1e-51, Method: Composition-based stats. Identities = 53/307 (17%), Positives = 108/307 (35%), Gaps = 25/307 (8%) Query: 10 LNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMV 69 L L QE S+++AA+R+ ++ +VS + L LF + TP Sbjct: 14 LKQLRAFCHAAQEGSISRAAQRLELSQPSVSLQIQALERELGIALFERRGPRIRLTPDGE 73 Query: 70 SMEQNLAEWMQMSNLL--LDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQAT 127 ++ + ++ + L HQ + + ++AA + +L L KQ RYP Sbjct: 74 TLYELAQPLVEGVDALPERFAARHQRLQTGRLDIAAGESTTLYILPDLLKQFMARYPGVH 133 Query: 128 IKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRK 186 +KL N D + A+ EVD+ LP + Y +++ + L Sbjct: 134 VKLHNLIGRDMISALQHDEVDLAVGSTL----------DLPEDLSYRAIYTYDLRLILPL 183 Query: 187 DHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMA 245 HP ++ L I + ++ V Q+ + + + +E Sbjct: 184 GHPLAEKSELTLADLASGELILPPRHLTTWRLVNLVFQQHNIPYRVRLEVGGWEIIKRYV 243 Query: 246 AQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIV 305 + +A + +L + +LP F + + ++ + +P+ Sbjct: 244 ELGFGIGIA----SSICLSGSERLHVRSLPEVFP-------QRTYGVMLRRGRYLSPQAK 292 Query: 306 WLRETIK 312 E + Sbjct: 293 RFLEVMA 299 >UniRef50_C0CUF5 Putative uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0CUF5_9CLOT Length = 302 Score = 205 bits (524), Expect = 1e-51, Method: Composition-based stats. Identities = 41/309 (13%), Positives = 95/309 (30%), Gaps = 21/309 (6%) Query: 7 TLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTP 66 + L L + + S+T AA R+ +VS ++ ++ ++ LF L T Sbjct: 2 DVTLRHLRIFLTVCEAGSMTGAANRLFTAQPSVSLAIREMEEYYGVKLFDRISKKLFLTE 61 Query: 67 LMVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + + + + + + + + A + +L K++ + YP+ Sbjct: 62 AGHQVLEYARHIIALFDEMEQEVRNPD-MSGTLRVGASITVGTFLLPGYVKELTRLYPEL 120 Query: 127 TIKLRNWDYDSLDA-ITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 ++ R + ++++ + E+D+G +H R I E D Sbjct: 121 RVEARIENSNNIEKCVLSNEIDLGVIEGIAHSRY----------ISSESFHGDRLAFVCP 170 Query: 186 KDHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 H + L I + D + + IA + + Sbjct: 171 PGHRFAGKQDVKLGDLQSESFILREKGSAGREIFDGLAAAHELDIRIAWQSTSNQAIIHG 230 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 A L + + + ++ + +E F +++HK Sbjct: 231 VAAGFGLSV-LPASLAAEGVERGSIAEFSV-------EGLSMERKFCVIYHKNKFLARGA 282 Query: 305 VWLRETIKN 313 L K Sbjct: 283 RELIRLFKE 291 >UniRef50_Q1AUB8 Transcriptional regulator, LysR family n=2 Tax=Bacteria RepID=Q1AUB8_RUBXD Length = 320 Score = 205 bits (524), Expect = 1e-51, Method: Composition-based stats. Identities = 41/306 (13%), Positives = 89/306 (29%), Gaps = 21/306 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 + L C + + ++++AA+ + +T ++ L L D LFV + G+ T Sbjct: 1 MLYRQLECFLAVARTGNLSRAAEEMYLTQPTLTARLKALEEELGDQLFVRTSRGMRLTEA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + K + A + L L ++ YP+ Sbjct: 61 GREFLPYAERVVSSFEEGKRRLEELRGASGGKLVVGASPGVGTYALPGLLERFVGAYPKV 120 Query: 127 TIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + +R D L+ + R EV +G + ++ L+ D + + Sbjct: 121 NVSVRTGHSEDILEMVLREEVHLGLTRE-----------MRHPEVESVPLYEDELVLVVA 169 Query: 186 KDHPALHQ-TWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 +H + + L I + S + G + + E + M Sbjct: 170 PEHRFTQRGSAGLAEIGEEQLILFDNDSSYYEQTQALFTSAGIRELRTLEVDNIEAAKRM 229 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 L +A PR ++ ++ L + + + Sbjct: 230 VEH--RLGIAFLPRSAIVRAVSAGNLVL-----IRVEDGPEMTRSIVALRRRDAPASGPV 282 Query: 305 VWLRET 310 E Sbjct: 283 RAFLEL 288 >UniRef50_UPI0000E0F9F3 Transcriptional Regulator, LysR family protein n=1 Tax=Rhodobacterales bacterium HTCC2255 RepID=UPI0000E0F9F3 Length = 294 Score = 205 bits (524), Expect = 1e-51, Method: Composition-based stats. Identities = 49/312 (15%), Positives = 106/312 (33%), Gaps = 24/312 (7%) Query: 7 TLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTP 66 +L L ++ Q + +AA +++VT A+S ++ K LF + ++ T Sbjct: 2 SLSFKQLQAFLMMAQSHNFAEAAIKMHVTQPALSSAIKKCEDILGGELFTRTTRTVALTK 61 Query: 67 LMVSMEQNLAEWMQMSNLLLDKPHH-QTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQ 125 + + + + +AA L Q + YP Sbjct: 62 EGEAFLPIAQRLHTEYQDAMAQIQAVFAKQTGTLSVAAMPSFAERYLPEYLYQFHILYPN 121 Query: 126 ATIKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 +IK+ + + +D + G+V+ GF+ H I + LF+D V + Sbjct: 122 ISIKIEDVVVEKVIDLVQEGKVECGFTFEPKHNL----------DITFTPLFTDQFVVVM 171 Query: 185 RKDHPALH---QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQS 241 HP +T L + + + + +D+V +E + I + Sbjct: 172 HASHPLNQPKHRTLTLHDIATFDMVVMNRNSNLRVFIDSVYEEQEITQHIIAEASQIGTL 231 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 + + + +A P+ + L +AL + KL+ ++ + + Sbjct: 232 GQLVKRQ--IGIAIVPQLSSQRMEELGLVCIAL-------NESKLQRKVGIITNPYQQLS 282 Query: 302 PKIVWLRETIKN 313 E ++N Sbjct: 283 VTTQAFLEMVEN 294 >UniRef50_B3JNA3 Putative uncharacterized protein n=1 Tax=Bacteroides coprocola DSM 17136 RepID=B3JNA3_9BACE Length = 295 Score = 205 bits (524), Expect = 1e-51, Method: Composition-based stats. Identities = 37/313 (11%), Positives = 97/313 (30%), Gaps = 23/313 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L + + ++ ++AA+ ++++ S +S+ + +L D LF + T Sbjct: 1 MELRQLKYFKEACERQNFSEAARILHISQSTLSQQIKQLEEELDVLLFDRIGKRIVLTEA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTP-RGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + A + + + + +++ A + + YP+ Sbjct: 61 GQAFLPYAARAIYDAEDGKQIIRDLKGIETGVLHIGVTYSMSPLLI-AALQLFNRAYPKI 119 Query: 127 TIKLR-NWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 +++ + L + +D S + + LFS +R Sbjct: 120 KVEITFATSEELLKQLDGSGLDFVLSFKPEDLTD---------DFETIPLFSSRLQFIVR 170 Query: 186 KDHPALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 HP + L P I + ++ + ++ E T+ + + + + Sbjct: 171 SSHPLAGLSSITLKRLSETPLILPERGFATRKKIEELCRKHQLELTVGVEMDDVHTIIHA 230 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 + T + LV +P+ L L W + + Sbjct: 231 LKSGQWATILT------QAAVRGEAGLVQIPI----LCNDHLTSRGFLFWPQGSYRKKSA 280 Query: 305 VWLRETIKNLYAS 317 + + + + A Sbjct: 281 LAFADFLLKITAG 293 >UniRef50_C9PJ12 Putative transcriptional regulator protein n=1 Tax=Vibrio furnissii CIP 102972 RepID=C9PJ12_VIBFU Length = 308 Score = 205 bits (524), Expect = 1e-51, Method: Composition-based stats. Identities = 53/297 (17%), Positives = 93/297 (31%), Gaps = 23/297 (7%) Query: 7 TLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTP 66 + L L +ER+ T AA ++++T SA+S+ + KL LF + T Sbjct: 2 DISYRQLKAFIALAEERNFTYAADKVHITQSALSQMMKKLAQQLSCELFERKGRTIVLTE 61 Query: 67 LMVSMEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQIYQRYPQ 125 + Q + L+ + H + +++ L + + +RYP Sbjct: 62 AGHHLYQEARFIVNRLEKLVQENHDRQHGYNKSLVVSSLYTLCASLAPKTLNDLKKRYPD 121 Query: 126 ATIKLRNWD-YDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 T +L D ++ G DIG + + +++++LF D C Sbjct: 122 FTFRLIEERVDDITHSVLEGRADIGINTNPN-----------HPDLNFDLLFRDSLCFVC 170 Query: 185 RKDHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 R DHP Q + + +Y I + S D +G S L Sbjct: 171 RADHPLAEQQDISWEQAHQYATIGVSPGNSLRTLADEAFSRVGLTYDPEFSASHTSTLLG 230 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 M A L N + + Q L+ K Sbjct: 231 MIAS--GLGSTILSSTIAGLNASDTIRFIP-------IVQPVQFRLVGLITRKDTQR 278 >UniRef50_UPI0001B4610F LysR family transcriptional regulator n=1 Tax=Mycobacterium intracellulare ATCC 13950 RepID=UPI0001B4610F Length = 320 Score = 205 bits (523), Expect = 1e-51, Method: Composition-based stats. Identities = 44/314 (14%), Positives = 98/314 (31%), Gaps = 21/314 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L + L + S TKAA+ + V PSA+S+ + + + LF + +S TP Sbjct: 1 MNLQQLRYVVALAEANSFTKAAEAMFVVPSALSQQVGRFESEIGLRLFERTTRSVSLTPA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTP-RGLKFELAAESPLMMIM-LNALSKQIYQRYPQ 125 ++ + + + + + + + + + L + YP Sbjct: 61 GEALMPLVRQVVAGIDQIAVDAQALGGTVVGRLTVGMMEIPSESLDVATLMATFHSHYPD 120 Query: 126 ATIKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 ++ LR+ D L +A+ ++D+ G + + LFS+ + Sbjct: 121 VSVTLRSGGSDVLIEAVRDRKLDVAIVGSNVSRTGGA--------LTFTHLFSEPLIAVM 172 Query: 185 RKDHPALHQ-TWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 HP + + ++ P I D R +A + ++ Sbjct: 173 PAHHPLTKKSSVSIIALAALPFIDFPPGYGLRHETDRGFA--NVTRRVAFEVTRVDEVTH 230 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 + L +A P L P+ + L+ + + Sbjct: 231 FVRKD--LGVALLPESVARTRANADPRLALRPVA-----GADMHRRVNLVAPRPEKRSAA 283 Query: 304 IVWLRETIKNLYAS 317 + + Sbjct: 284 CQAFVGCVADHIEQ 297 >UniRef50_A4JED2 Transcriptional regulator, LysR family n=9 Tax=Proteobacteria RepID=A4JED2_BURVG Length = 308 Score = 205 bits (523), Expect = 1e-51, Method: Composition-based stats. Identities = 71/318 (22%), Positives = 126/318 (39%), Gaps = 20/318 (6%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 LDLNLL+ L L+ E+++++AA++I+++ SA S +LA+LR +FDD L V + Sbjct: 1 MRFNKLDLNLLVALDALLSEQNISRAAEKIHLSQSATSNALARLREYFDDELLVQVGRKM 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQIY 120 PTP +++ + + + + + P F L M ++ L + Y Sbjct: 61 EPTPRAEALKDAVRDILVRVDATVTAQPEFVPAQACRLFRLFVSDYTMTTLIPHLFRLAY 120 Query: 121 QRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 + P LR + RGE D+ +E EVL + Sbjct: 121 AQAPGIGFDLRPQVAYPHRVLERGEADLLIIPKE----------YCSTEHPAEVLLEETF 170 Query: 181 CVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQ 240 C L + P + ++ HI + + T +Q LG R + S F Sbjct: 171 CCVLWEHSPLAKGELTKERYMGAGHIVVQVGEGQTALEAWFMQRLGVVRRVEASTYSFLS 230 Query: 241 SLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 + + + R + + L L +PL +Q ++ WHK + Sbjct: 231 PAHLLVGTNRIA-TMHRRLAEAAARDLPLVLRDVPLTVPTMEQ-------SVQWHKHRTS 282 Query: 301 NPKIVWLRETIKNLYASM 318 + ++WLR +K A+M Sbjct: 283 DQGLMWLRALLKEAVAAM 300 >UniRef50_B6IX78 Hydrogen peroxide-inducible genes activator n=1 Tax=Rhodospirillum centenum SW RepID=B6IX78_RHOCS Length = 312 Score = 205 bits (523), Expect = 2e-51, Method: Composition-based stats. Identities = 42/313 (13%), Positives = 97/313 (30%), Gaps = 27/313 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L + + + R +A++ +V+ +S L KL PLF + + PT L Sbjct: 1 MNLRDLRYVVAIAEHRHFGRASEACHVSQPTLSGQLRKLEDRLGAPLFERTSKWVVPTAL 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQ-TPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + ++ ++ ++ + P L L ++ + ++ QR+P Sbjct: 61 GQQVVRHARAALEQADAIEALARAARDPLAGPLRLGVIPTLSPYLMPLVLPELRQRHPGL 120 Query: 127 TIKL-RNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 T+ L + + ++ + R E+D + + LF + + Sbjct: 121 TLVLWEDLTANLIERLRRHELDAALIATGTDGE----------DLIGVDLFVEPFLAAVP 170 Query: 186 KDHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIA--MSLPEFEQSL 242 HP + + D R + + + L G + + + Sbjct: 171 TGHPLAARDWVSEDDLQRADMLVLADGHCLR---EQALGVCGAPPPGGDDLRAASLDTLV 227 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 M + P + L L + L+W Sbjct: 228 SMVSA--GYGCTLVPALAAPGLERRGLVLRPVD-------SFGACRTVRLVWRPTFPRQK 278 Query: 303 KIVWLRETIKNLY 315 + L E ++++ Sbjct: 279 ALDALAELVRSVV 291 >UniRef50_C7MTU9 Transcriptional regulator, LysR family n=3 Tax=Actinomycetales RepID=C7MTU9_SACVD Length = 319 Score = 205 bits (523), Expect = 2e-51, Method: Composition-based stats. Identities = 52/315 (16%), Positives = 104/315 (33%), Gaps = 24/315 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L + +ER+ T+AA+R++V+ S +S + +L LF S ++ TP Sbjct: 1 MELRQLEYFVAVAEERNFTRAAERVHVSQSGISAQIRQLERELGATLFDRSTRTVTLTPA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTP-RGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + + + + T + + + L ++ +P Sbjct: 61 GRAALDHARAALAAAAAVDQAVSDVTGLLRGRLTVGMVIGCTLTPLFDALAAFHRAHPGV 120 Query: 127 TIKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + L + D +D + G +D+ G + P ++ + S+ + Sbjct: 121 ELSLWEDNSDRLVDGVRAGTLDLALVG---------AAGAPPHDLNALTIISEPLVAVVP 171 Query: 186 KDHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 HP Q +L + +P + D G E TI + + Sbjct: 172 PGHPLATQPQVSLGDLVDHPLACMPPGTGLRAVFDEACTVRGIEPTITWEASAADALAEL 231 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 L +A ++ L ALPL + L+W NP + Sbjct: 232 --TFRELAVAVLSES---MATHYRDRLTALPLD-----DVDIPALLALVWKPST--NPAL 279 Query: 305 VWLRETIKNLYASMA 319 L E + + A Sbjct: 280 HALIEHCEQAFGESA 294 >UniRef50_B4SSK9 Transcriptional regulator, LysR family n=3 Tax=Stenotrophomonas RepID=B4SSK9_STRM5 Length = 302 Score = 205 bits (523), Expect = 2e-51, Method: Composition-based stats. Identities = 57/321 (17%), Positives = 108/321 (33%), Gaps = 31/321 (9%) Query: 7 TLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTP 66 +++L L + +AA+R+ ++ +S+ + +L LFV S + T Sbjct: 2 SIELRHLRYFLAVADTLHFGQAAERLGMSQPPLSQQIRQLEDLIGARLFVRSHRRVQLTA 61 Query: 67 LMVSMEQNLAEWMQMSNLLLDKP-HHQTPRGLKFELAAE-SPLMMIMLNALSKQIYQRYP 124 +++ + +D+ Q + + + + + Q QRYP Sbjct: 62 AGELLQERARAIVLQVESAVDEVQRAQRGEQGELRIGLTRATPLSPQIPRSILQYRQRYP 121 Query: 125 QATIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVW 183 Q ++L + +DA+ G +D+G + +LP + LF D + Sbjct: 122 QVRLQLSEMNTLQQIDALLDGSLDVGIIRK----------RALPPELVAHSLFVDPLALI 171 Query: 184 LRKDHPALHQ-----TWNLDTFLRYPHISI--CWEQSDTWALDNVLQELGRERTIAMSLP 236 + DHPAL + T +L F + P ++ + + G I Sbjct: 172 VHADHPALRRLSKQGTLSLRDFAQEPFVAFRRSAGAGIHDHMIALCAAAGFTPRIVQEAG 231 Query: 237 EFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHK 296 E + L A P C + ++ VAL L WH Sbjct: 232 EASTLIS--LAAAGLGAAILPSSCDHI-RVEGARFVAL-------ADAGAHSEVQLAWH- 280 Query: 297 RNSHNPKIVWLRETIKNLYAS 317 R P I ++ +A Sbjct: 281 REGVTPLIRNFAGLLREAFAE 301 >UniRef50_A0KPQ5 Transcriptional regulator n=1 Tax=Aeromonas hydrophila subsp. hydrophila ATCC 7966 RepID=A0KPQ5_AERHH Length = 307 Score = 205 bits (523), Expect = 2e-51, Method: Composition-based stats. Identities = 50/313 (15%), Positives = 100/313 (31%), Gaps = 19/313 (6%) Query: 7 TLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTP 66 + + SV++AA ++++ SAV+ ++ +L LF +P G+S T Sbjct: 2 NFTFRQIRYFVAVADSFSVSRAAAELHISQSAVTSAIRELETELGAALFERNPRGVSLTT 61 Query: 67 LMVSMEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQIYQRYPQ 125 + + + + + + + L+ + + +P Sbjct: 62 QGHQFLLHARRILGAMTEAGQSLKAVAQQDQGRLTIGVTTLVAGYYLSEALGRFRRAFPA 121 Query: 126 ATIKL-RNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 I++ + I GEVD+G R D E+L VWL Sbjct: 122 VQIEVKEDEQPYLEHQIVNGEVDVGILMTNRTIRQEA--------FDTELLTRSPLRVWL 173 Query: 185 RKDHPA-LHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 +HP T +L P IS+ + + L+ G I + E Sbjct: 174 AANHPLCAESTLSLKALGEEPMISLTAD-QLDQIIGGGLRRYGIAPRIVLRTASVEAVRS 232 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 + A L LA P + L Q + ++ + L+W + + Sbjct: 233 LVASQ--LGLALLPDFAYRPWSLEQERV-----EARAIKEPIPAIDIGLVWRRGSRLEWT 285 Query: 304 IVWLRETIKNLYA 316 + +++ Sbjct: 286 AREFIDIVRDQSR 298 >UniRef50_B5JV63 LysR protein n=1 Tax=gamma proteobacterium HTCC5015 RepID=B5JV63_9GAMM Length = 307 Score = 205 bits (523), Expect = 2e-51, Method: Composition-based stats. Identities = 40/284 (14%), Positives = 90/284 (31%), Gaps = 15/284 (5%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +++ L L L + + +AA +V+ +S + KL + L + T + Sbjct: 1 MNIRDLQYLMALAEHQHFGRAADACHVSQPTLSTQIKKLEGELNVTLVERDNKKVMLTEV 60 Query: 68 MVSMEQNLAEWMQMSNLLLD-KPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 ++ + A+ ++ + + D P + L + +L + I +R+P Sbjct: 61 GNAVVERTADILRGVDEIRDIALQASDPESGRLALGLIPTIGPYLLPYAMRAIKKRFPDL 120 Query: 127 TIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 I L D +D + G++D + + ++++ L Sbjct: 121 RIYLYEAQTADLVDMLKSGKIDAAIMALPVDDDRIDNIP----------IYNEAFLAALP 170 Query: 186 KDHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 +HP ++ N + + V Q +G E M Sbjct: 171 FNHPLADRSLLNPSELKDSEMMLLEDGHCLRDQALEVCQNMGASEMSGFRATSLETLRQM 230 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEV 288 A + P NQ+ + +P + Q++ Sbjct: 231 VAS--GAGVTLMPTLAAETNQIEGSDVAIVPFEEPQPQRQVGIF 272 >UniRef50_Q0K3U9 Transcriptional regulator, LysR-family n=2 Tax=Betaproteobacteria RepID=Q0K3U9_RALEH Length = 311 Score = 205 bits (523), Expect = 2e-51, Method: Composition-based stats. Identities = 63/316 (19%), Positives = 116/316 (36%), Gaps = 21/316 (6%) Query: 4 SITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLS 63 +DLNL++ L +L++ERSV++AA R+++ AVS +LA+LR FDDPL V + G+ Sbjct: 7 HFRGVDLNLMVTLTVLLRERSVSRAAARLHLGQPAVSGALARLREMFDDPLLVRTAHGME 66 Query: 64 PTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQIYQ 121 PT + +E+ L + L + P F + + + + + + Sbjct: 67 PTERALELERRLLPALGEIEAALLQRRDFDPLTSDRTFVVGMPDWVELWLAPRILPSLST 126 Query: 122 RYPQATIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 P + + D + + R E+D+G R + + Sbjct: 127 CAPGVRLAIVPTDPFRGTEMLERNEMDLGIGPFAKGAAWRRERAWQTMGFR--------- 177 Query: 181 CVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQ 240 Q +L +LR+PH+ + + + D L G+ R + S F Sbjct: 178 -CVYGAAPLDACQILSLQDYLRFPHVLVSYRGAFDSTADTWLATQGQARDVRYSSARFAS 236 Query: 241 SLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 + L + L + P+P + T +W + Sbjct: 237 VPAILKGTAALA-TVPAVLADQWCATEGLRQLPCPVPMP-------DFTVTAVWSAARDN 288 Query: 301 NPKIVWLRETIKNLYA 316 + ++WL T L Sbjct: 289 DAGLMWLANTFAGLAQ 304 >UniRef50_Q0BCW3 Transcriptional regulator, LysR family n=30 Tax=Proteobacteria RepID=Q0BCW3_BURCM Length = 342 Score = 205 bits (523), Expect = 2e-51, Method: Composition-based stats. Identities = 63/303 (20%), Positives = 108/303 (35%), Gaps = 18/303 (5%) Query: 15 CLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSMEQN 74 L + RSV AA + ++PSA+S +LA+LR D LFV + PT + Sbjct: 50 AFDALYRHRSVAAAAHELAMSPSALSHALARLRDAIGDALFVRLGNEMQPTVRADDIATW 109 Query: 75 LAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQIYQRYPQATIKLRN 132 + + + L + P F AA +L AL +I + P+ I++ + Sbjct: 110 AGDALDTMSKGLARARRFDPAQSDRTFVFAASDYTAFAVLPALLARIERVAPRLRIRVVH 169 Query: 133 WDYDS-LDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPAL 191 + +D + G +D E + FSD V HP + Sbjct: 170 SERKISIDELAAGRIDFALGYHEESTADSPGIEDFDW-------FSDDYVVIASAAHPDI 222 Query: 192 HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQPDNL 251 + LD +L H+ + +D VL LG R +A+ LP + F A+ L Sbjct: 223 RRRLTLDQYLAARHVVVTPWNESRGVVDYVLDRLGLARQVAVRLPSVLAAPFAIAESTLL 282 Query: 252 LLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWLRETI 311 + R Q + + P + H +++ W+R + Sbjct: 283 M-TVPNRAAQALRHAAPIRIFPAPFEIP-------RYTVKVYSHAKHARTDAHRWIRAQL 334 Query: 312 KNL 314 + Sbjct: 335 LDA 337 >UniRef50_D0XGK1 Putative uncharacterized protein n=1 Tax=Vibrio harveyi 1DA3 RepID=D0XGK1_VIBHA Length = 326 Score = 205 bits (523), Expect = 2e-51, Method: Composition-based stats. Identities = 76/320 (23%), Positives = 135/320 (42%), Gaps = 22/320 (6%) Query: 1 MKKSI-TTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSP 59 M K + + LDLNLL +L QER++ +AA+R+ V+ AVSK+L +LR F+D LFV + Sbjct: 14 MAKDLFSNLDLNLLRTFIILHQERNMRRAAERLFVSQPAVSKALQRLRDHFEDELFVKTH 73 Query: 60 LGLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSK 117 GL T + +NLA + ++ L+ P ++A ++ + + + Sbjct: 74 HGLRATEYANDLAENLAPLLDEISITLNGSKAFNPLEMNGTIKIALAPFILSSYASEICQ 133 Query: 118 QIYQRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFS 177 I Q P I L NW ++D I + +V +G + ++ P + +++ Sbjct: 134 AIRQAAPNVQIHLLNWSRSTMDEIIKDDVTLGVNYE---------INHAPKELLTKMIVK 184 Query: 178 DVPCVWLRKDHPALHQTWNLDTFLRYPHISI--CWEQSDTWALDNVLQELGRERTIAMSL 235 D C ++RKDHP + ++ S + +++ G E IA Sbjct: 185 DTFCAYVRKDHPFPGDRLQISDCRDLEFATVIAADWNSSVSFSEKIMKIKGVEPKIAFRS 244 Query: 236 PEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWH 295 + + A D + A+ +Q L L + FD + +H Sbjct: 245 ELPSAIIDVVANSDMVFPASKTVNVDKISQ-----LRRLDIEFDGIVIEPC---LHAYYH 296 Query: 296 KRNSHNPKIVWLRETIKNLY 315 +N N + WLR I ++ Sbjct: 297 HKNRRNEMVHWLRSIITDVI 316 >UniRef50_A9HWS6 Transcriptional regulator, LysR-family n=1 Tax=Bordetella petrii DSM 12804 RepID=A9HWS6_BORPD Length = 320 Score = 205 bits (523), Expect = 2e-51, Method: Composition-based stats. Identities = 47/309 (15%), Positives = 99/309 (32%), Gaps = 22/309 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +DL L + + S +AA+ +++ A+S S+ KL L G+S TP Sbjct: 7 IDLRQLRQFVTIAELGSYRRAAEALHIAQPALSVSIQKLEHSVGVLLLERGAKGVSLTPA 66 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNALSKQIYQRYPQA 126 ++ + + ++ + L ++L RYP Sbjct: 67 GAALMDDARRALFHADQARQSARRVALGELGRLRLGFVGSATYMLLPRCLPAFRHRYPDV 126 Query: 127 TIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 ++LR + + E+D G ++ V+ D + L Sbjct: 127 ELELREDSTVRLAEMLRANELDAGLVRGPLAE---------DTSLSAWVVERDSLILALP 177 Query: 186 KDHPALHQTWNLDTFLRYPHISICWE--QSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 HP +L P + + + ++ G I+ + + + Sbjct: 178 AAHPLAGGPVSLQAVRSEPFVMYAPDKVPGLYGVAQALCRKAGFSPRISQEAIQVQTLVS 237 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 + A L +A P + Y+ H + + + +L+ H+ S P Sbjct: 238 LVAS--GLGVALVPGVTRAYSTPHVV------FADLLDADARDALALSLVAHRDTSCAPV 289 Query: 304 IVWLRETIK 312 + LR+ + Sbjct: 290 LK-LRDVML 297 >UniRef50_Q15SK5 Transcriptional regulator, LysR family n=9 Tax=Gammaproteobacteria RepID=Q15SK5_PSEA6 Length = 306 Score = 205 bits (522), Expect = 2e-51, Method: Composition-based stats. Identities = 70/324 (21%), Positives = 132/324 (40%), Gaps = 28/324 (8%) Query: 1 MKKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPL 60 M K I LD+ L Q L++E++ +KAA ++ +T AVS+ L KLR FDD LF+ Sbjct: 1 MSK-IDRLDIKQLRIFQALIREKNASKAASQLGLTQQAVSEQLKKLRDVFDDRLFLRKTN 59 Query: 61 GLSPTPLMVSMEQNLAEWMQMSNLLLDK-PHHQTPRGLKFELAAESPLMMIMLNALSKQI 119 G PTPL + ++ + + LL + ++ ++A ++L +L ++ Sbjct: 60 GFIPTPLAEHLSVDIDKLLNGFQALLSPKVFNPKTISGEYVISATDYAQQVVLPSLIAKL 119 Query: 120 YQRYPQATIKLRNWDYDSLDAI-TRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSD 178 P I +R+++ D+L + G+V++ + + P S +++ LF + Sbjct: 120 RIESPNLKIIVRDFEIDTLHDLMLSGKVNLAIAFPDYIPDSYPIIN----------LFEE 169 Query: 179 VPCVWLRKDHPALHQTWNLDTFLRYPHISICW-EQSDTWALDNVLQELGRERTIAMSLPE 237 + Q+ +L YP I + ++D+ + G R + +S P Sbjct: 170 HHVCVASRHASIATQSPSLAEVASYPSIIASPSRPNFKGSIDDWFKGFGLTRNVVVSAPC 229 Query: 238 FEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKR 297 F D +A P L ++ L P P WH R Sbjct: 230 FSIVPMYLNTTD--SIAFLPSRAIKGLDLVEIELEHCPEP----------FDVIAAWHPR 277 Query: 298 NSHNPKIVWLRETIKN--LYASMA 319 + + W+ + + + A++A Sbjct: 278 YNDDSLQKWIISKLTDEPVAANLA 301 >UniRef50_B0KIN0 Transcriptional regulator, LysR family n=20 Tax=Proteobacteria RepID=B0KIN0_PSEPG Length = 313 Score = 205 bits (522), Expect = 2e-51, Method: Composition-based stats. Identities = 59/311 (18%), Positives = 103/311 (33%), Gaps = 21/311 (6%) Query: 10 LNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSP-LGLSPTPLM 68 L L ++ SV +A++++ + ++S ++ L F LF+ G+S TP Sbjct: 18 LRQLKYFVTTVEAGSVAEASRQLYIAQPSISTAIKSLEESFGVQLFIRHHAQGVSLTPSG 77 Query: 69 VSMEQNLAEWMQMSNLLLD-KPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQAT 127 +QM++ + ++ + + L L QRYP Sbjct: 78 KRFYAKTRALLQMAHEFEQNALADNDTVAGQIDIGCFETVAPLYLPRLIAGFRQRYPGVD 137 Query: 128 IKLRNWD-YDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRK 186 I+LR+ + D + +T G D+ F + E +P P V L + Sbjct: 138 IRLRDGEQQDLIQGLTAGTFDLAFLYDHDLDGTIEAEPLMPPQ---------KPYVLLPE 188 Query: 187 DHPALHQ-TWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMA 245 +H Q +L P I + S ++ E+G I S P E M Sbjct: 189 NHRFAGQAQVSLRDLCPEPMILLDVAPS-RTYFVSLFNEMGLTPNIVFSSPSIEMVRGMV 247 Query: 246 AQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIV 305 Q L + +Y +L ++ + P S W KR Sbjct: 248 GQGFGFSLLVTRPHTEYTYDGQRLAMLDITEPVALSG-------LAAAWLKRVQLTKPAQ 300 Query: 306 WLRETIKNLYA 316 E + A Sbjct: 301 LFVEFCREELA 311 >UniRef50_A8IAC4 Transcriptional regulator n=1 Tax=Azorhizobium caulinodans ORS 571 RepID=A8IAC4_AZOC5 Length = 313 Score = 205 bits (522), Expect = 2e-51, Method: Composition-based stats. Identities = 43/319 (13%), Positives = 100/319 (31%), Gaps = 28/319 (8%) Query: 1 MKKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPL 60 M + ++L L + Q S ++AA+ + ++ SA+S+++ +L A L + Sbjct: 1 MSMN---MNLRQLRAFVAVAQTGSFSRAARLLGLSQSALSQAVQQLEADLGVRLLDRTTR 57 Query: 61 GLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQ-TPRGLKFELAAESPLMMIMLNALSKQI 119 + + + + + + L R + + + +L + Q Sbjct: 58 SVQLSAIGREFLPGVQRVLADLDHQLQDLRDLKEHRRGHVTVTCVPSVALRLLPQVLAQF 117 Query: 120 YQRYPQATIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSD 178 + +P ++ +R + A+ G+ ++G + +D L +D Sbjct: 118 QEAHPMVSVAVREAPRHQIITALRSGDAELGVANVPGDDP----------DLDSTFLLTD 167 Query: 179 VPCVWLRKDHPALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPE 237 + +R+DHP ++ + + I++ ++ L Sbjct: 168 SFALVMRRDHPLAAHESVTWEEAGQAGLIAMAPGTGIRLEMERGLPAPAV---PHHEAEH 224 Query: 238 FEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKR 297 L M + +A P L L + ++E L+ Sbjct: 225 PATLLAMVEA--GVGVAPLPGLAWPRPDHAGLTFRPL-------VEPRVERQLFLIKRAG 275 Query: 298 NSHNPKIVWLRETIKNLYA 316 P L I A Sbjct: 276 RDLTPAGRALHRAILAGVA 294 >UniRef50_Q2SHJ0 Transcriptional regulator n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SHJ0_HAHCH Length = 291 Score = 205 bits (522), Expect = 2e-51, Method: Composition-based stats. Identities = 67/315 (21%), Positives = 133/315 (42%), Gaps = 30/315 (9%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 ++ +DLNLL+ L L+ ER VT+AAKR++++ A S +L + R F DPL + + Sbjct: 1 MNLRGVDLNLLVILDALLDERHVTRAAKRLHLSQPATSSALERCRHLFGDPLLIRGRGEM 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQ-TPRGLKFELAAESPLMMIMLNALSKQIYQ 121 + S+ + + + + ++++ + + +L L +++ Sbjct: 61 RLSAKAESLREPIKALLTQAERVINQADTPLAELRQTIRILMADFPVSALLGPLHQRLIT 120 Query: 122 RYPQATIKLRNWDYD--SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 P + ++ W +L+ + +GE D+ S + ++ + L + Sbjct: 121 SAPNLDLIVQPWHGAKSALEQLAKGEADLAVS----------VFPNVGASFRCVELLYED 170 Query: 180 PCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFE 239 CV +RKDHP Q +NL +L YPH+ + +D LQ G R + + +P F+ Sbjct: 171 YCVLMRKDHP-AAQNFNLQQWLAYPHVLVSGRGDADSPVDQTLQARGLRRRVGLVVPYFQ 229 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 + + +A P +C + + P+P + P L WH R Sbjct: 230 MAPDL--------IALLPTHCV-PQDTTKFTVFPPPIPVE-------GFPLHLAWHVRKH 273 Query: 300 HNPKIVWLRETIKNL 314 + + + E I+ + Sbjct: 274 GDQAVSHVVEVIREV 288 >UniRef50_Q5E7C7 Transcriptional regulator, LysR family n=5 Tax=Vibrionaceae RepID=Q5E7C7_VIBF1 Length = 330 Score = 205 bits (522), Expect = 2e-51, Method: Composition-based stats. Identities = 64/319 (20%), Positives = 119/319 (37%), Gaps = 22/319 (6%) Query: 1 MK-KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSP 59 M + +DLNLL+ LM+ +SV+ AA ++ V SA+S SL++LR DPLF Sbjct: 21 MNEINWKAVDLNLLVAFSTLMETKSVSLAANKLFVGQSAMSHSLSRLRELLHDPLFERQG 80 Query: 60 LGLSPTPLMVSMEQNLAEWMQMS--NLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSK 117 + PT + + + + +Q ++L + F++ ++ + Sbjct: 81 HQMIPTAKAIQLYPLVNKVLQTISGDILKVDTFEASEFTGTFKIGMTDYAELLFAADIFD 140 Query: 118 QIYQRYPQATIKLRNWDYDSLDAITRGE-VDIGFSGRESHPRSRELLSSLPLAIDYEVLF 176 I+Q P A + D + E +D+ + Y+ L+ Sbjct: 141 AIHQLAPNAQLCFTTVDKANYQDRFDSEPLDLVIGSMKPEL----------KEFQYQTLY 190 Query: 177 SDVPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLP 236 ++ LD ++ PH + + + +D L+ LG R+++++ Sbjct: 191 TEKHVCMWDGQRHLFSSPITLDDYISLPHALVSPDGALKTGVDKELKALGVGRSVSVASK 250 Query: 237 EFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHK 296 F + + D L+ P L L + L E E L+W Sbjct: 251 HFLTIRHLMKKRD--LICVVPELMAQ------LDLFSEKLVHSEPPINVGEFDIQLIWQT 302 Query: 297 RNSHNPKIVWLRETIKNLY 315 RN N + WL+E + Sbjct: 303 RNKENKRYQWLKELLIQTI 321 >UniRef50_Q6MJZ8 Transcriptional regulator, LysR family n=1 Tax=Bdellovibrio bacteriovorus RepID=Q6MJZ8_BDEBA Length = 318 Score = 205 bits (522), Expect = 2e-51, Method: Composition-based stats. Identities = 50/313 (15%), Positives = 95/313 (30%), Gaps = 27/313 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 + L L + + S + AA++ +VT +S + KL LF + + PT + Sbjct: 1 MTLTQLEYILAVADTGSFSHAARQCHVTQPTLSMQIQKLEEELGVILFDRTKQPIRPTSV 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + Q ++ S L + + + L +L K+I + + Sbjct: 61 GEEVLQQARLVVKGSQHLKEIVDDAKGSLRGELRIGIIPTLAPYLLPLFLKKIKDAHSRL 120 Query: 127 TIKLRNWDYDS-LDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + + ++ I +D+G L I VLF + V+L Sbjct: 121 HLTFEELQTEVMIEKIRNHSLDLGIVVTPID----------DLNIANHVLFYEPFNVYLS 170 Query: 186 KDHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQE----LGRERTIAMSLPEFEQ 240 K HP L +T + + + ++ + ER+ + E Sbjct: 171 KGHPLLTQKTLDEKDLSSEDVLLLNEGHCFREQSLSLCRNKKVPAAMERSFSFESGSLET 230 Query: 241 SLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 + Q + P Q + L P +L+ Sbjct: 231 LKKLVDQGE--SFTLLPYLAAMDVQDKK-RLRPFSDPVPT-------REVSLVHGPHFQR 280 Query: 301 NPKIVWLRETIKN 313 + L ETIK Sbjct: 281 KALLKALIETIKR 293 >UniRef50_A9F0I7 Transcriptional regulator, LysR family n=20 Tax=Proteobacteria RepID=A9F0I7_SORC5 Length = 319 Score = 205 bits (522), Expect = 2e-51, Method: Composition-based stats. Identities = 69/298 (23%), Positives = 118/298 (39%), Gaps = 21/298 (7%) Query: 22 ERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSMEQNLAEWMQM 81 E SVT AA+R+ ++PSA+S++LA+LR DPL V + GL PTP + + + ++ +Q Sbjct: 18 EGSVTGAARRLRLSPSAMSRALARLRETLGDPLLVRAGRGLVPTPRALELRERVSHLVQG 77 Query: 82 SNLLLDKPHHQT--PRGLKFELAAESPLMMIMLNALSKQIYQRYPQATIKLRNWDYDSLD 139 + +L F L + AL ++ + P ++ Sbjct: 78 AEAVLRPAEELDLKRLVRTFTLRTSEGFVESFGPALIERTGAQAPGVRLRFVAKPDKDSA 137 Query: 140 AITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPALHQTWNLDT 199 + G VD+ + + + + LF D +R DHP Sbjct: 138 PLRTGAVDL---------ETGVVDEDTSPELRTQALFRDRFIGVVRSDHPLGRAKITPAR 188 Query: 200 FLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQPDNLLLATAPRY 259 + H+ +D L LG R + + F ++ +A D L+AT P + Sbjct: 189 YAAGRHVVFSRRGVAKGRIDESLAALGLAREVVTIVGGFATAIALARATD--LIATVPDH 246 Query: 260 CQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWLRETIKNLYAS 317 + L ALP E+ +LLWH R +P WLR++++ + A Sbjct: 247 -HTRSLRDGLFSFALPFAAP-------EITVSLLWHPRLDADPAHRWLRDSVREVVAG 296 >UniRef50_Q1LD16 Transcriptional regulator, LysR family n=8 Tax=Proteobacteria RepID=Q1LD16_RALME Length = 315 Score = 205 bits (522), Expect = 2e-51, Method: Composition-based stats. Identities = 74/322 (22%), Positives = 128/322 (39%), Gaps = 27/322 (8%) Query: 4 SITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVN--SPLG 61 +DLNLL+ L L+ ER+VT A+R+ +T AVS LA+LR FDDPL + + G Sbjct: 11 DFKGVDLNLLVTLDALLDERNVTHTAERLGLTQPAVSAQLARLRRIFDDPLLIPADTGRG 70 Query: 62 LSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTP--RGLKFELAAESPLMMIMLNALSKQI 119 + + +++ + L ++ ++ + P +F +AA + +L +++ Sbjct: 71 MIASARALALLEPLHVALKDLESVVHRRPEFDPFVDTRQFVIAASDNATSTLGMSLLERL 130 Query: 120 YQRYP-QATIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFS 177 + + + + GEVD+ +P + L Sbjct: 131 SIVAGTGVRVAFVHGRQAEIAAQLESGEVDLLIGSE----------RMVPPTMRARKLLD 180 Query: 178 DVPCVWLRKDHPALHQTWNLDTFLRYPHISIC-WEQSDTWALDNVLQELGRERTIAMSLP 236 + + RK HP + LD + + H+ + S +D LQ LGR R +A+S+ Sbjct: 181 ETFVMAQRKSHPRGARRLTLDMYCKLRHVLVSTSGGSFFGFVDEQLQLLGRSRDVAVSVQ 240 Query: 237 EFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHK 296 F + + D + R Y L ALP + WH Sbjct: 241 AFTVVPDLLRRSDYV-CTMPARLAARYADW--LDAFALPFDVP-------GFSLSAAWHP 290 Query: 297 RNSHNPKIVWLRETIKNLYASM 318 RN +P I WLR T+ + + Sbjct: 291 RNHADPAIAWLRSTLAEVAGQL 312 >UniRef50_B8IVL1 Transcriptional regulator, LysR family n=2 Tax=Proteobacteria RepID=B8IVL1_METNO Length = 318 Score = 205 bits (522), Expect = 2e-51, Method: Composition-based stats. Identities = 43/308 (13%), Positives = 102/308 (33%), Gaps = 20/308 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +DL L +++ + +AA+R+ T A++K + +L A LF S GL+ T + Sbjct: 1 MDLRDLAYFEVIADLGHLGRAAERLGRTQPALTKCIQRLEASVGAELFARSSRGLALTQV 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQ-TPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + L + + + + +L + + + P Sbjct: 61 GEVLLARARRMRTAMDEALREVSDFAAGAAGHVRIGTGATMAEYLLPQVCRALIAAAPAV 120 Query: 127 TIKLRNWDYDSLD-AITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 T++L+ L A+ ++D+ +L+S + +D V Sbjct: 121 TVELQIGMSGVLRTALRDNQLDLIIGP---------VLASDHDEFAHVTFGTDDVVVVAA 171 Query: 186 KDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRE-RTIAMSLPEFEQSLFM 244 + HP + +++ +++ + + LD V Q G + + + Sbjct: 172 RGHPLCGRPLSIEDLVKWKWVLPAKSVAMRQWLDTVFQAHGLPGPAVQIETNSITMLPRL 231 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 + D L + L L L + P ++ + +P Sbjct: 232 IGETDLLSFTSTRNL---LPDRLGGRLERLGLD-----ATTMRRPLGCVYRREGYLSPAA 283 Query: 305 VWLRETIK 312 + + ++ Sbjct: 284 LRVVTLLQ 291 >UniRef50_Q1GFT2 Transcriptional regulator, LysR family n=1 Tax=Ruegeria sp. TM1040 RepID=Q1GFT2_SILST Length = 299 Score = 204 bits (521), Expect = 2e-51, Method: Composition-based stats. Identities = 64/313 (20%), Positives = 121/313 (38%), Gaps = 21/313 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +D++LL +M+ER+VT AA+R+ + S VS +LA+LR D LF+ + G+ PT Sbjct: 3 VDISLLRVFHAVMEERNVTAAARRLGQSQSTVSAALARLRDALGDELFLRARYGVEPTEK 62 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTP--RGLKFELAAESPLMMIMLNALSKQIYQRYPQ 125 + + ++A + P +F L +++ L++ Q P+ Sbjct: 63 ALQIAPDIAAGLDRLEQAFRAAEPFDPIRSTRRFRLLLGPYAEVVLAPDLAEAFAQHAPK 122 Query: 126 ATIKLRNWDYDS-LDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 A ++L D + D+ P + LFSD + Sbjct: 123 AQLELAPIGPDLDPRKLAAQSFDLAIGRFAPP----------PDDLVVSDLFSDGFRCIV 172 Query: 185 RKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 + +LD + PH+ + + + G +R A+++ F + Sbjct: 173 APAALPEGASLDLDLYETLPHVIVAPPGRWRTGVHKLTAASGLQRNTAVAVSHFLTAAPT 232 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 A+ + + R + L VA+P + P + WH +P+ Sbjct: 233 VARINGIA-TVPARIAAMVAAPYGLRNVAVP-------RDLGTFPTQIAWHPHQRRDPRH 284 Query: 305 VWLRETIKNLYAS 317 VWLR+ + +L A+ Sbjct: 285 VWLRDLLLSLTAT 297 >UniRef50_C5BEX8 Transcriptional regulator, LysR family n=12 Tax=Enterobacteriaceae RepID=C5BEX8_EDWI9 Length = 312 Score = 204 bits (521), Expect = 3e-51, Method: Composition-based stats. Identities = 55/307 (17%), Positives = 104/307 (33%), Gaps = 24/307 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +D+ L ++++ S T+AA+++ VT +SK L L L + GL T Sbjct: 1 MDVRTLRYFVEVVRQHSFTRAAEKLFVTQPTISKMLRNLEEELGCTLLIREGRGLRLTDS 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + Q + L + +L + + L + QRYP Sbjct: 61 GNVVYQRAQTILDQFGQLRTELDDLGALKKGSLKLGIPPMVGTQ-MAGLIGEFRQRYPGI 119 Query: 127 TIKLRNWDYDSLD-AITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + + + +++ A+ GE+D+ + L + AI LFS V L Sbjct: 120 ELHIAEFGGLTVEQAVLSGELDLALTA---------LSAQPDPAIASLPLFSHPLYVLLP 170 Query: 186 KDHP-ALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 + P + + + + + L G + IA+ +++ M Sbjct: 171 RQAPWLTRSALGMTDLAQQNILLYNEDFALYQQLMQAFSAAGVKPQIAVRSGQWDFLAAM 230 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLW-HKRNSHNPK 303 + +A P+ +L L+ LPL L L+W H R + Sbjct: 231 VQA--GVGIAILPQPICQ--RLDPHSLLWLPLA------PTLMWRLGLIWCHGRYLSHSA 280 Query: 304 IVWLRET 310 W+ Sbjct: 281 QAWIARC 287 >UniRef50_Q0JY95 Transcriptional regulator, LysR-family n=4 Tax=Proteobacteria RepID=Q0JY95_RALEH Length = 318 Score = 204 bits (521), Expect = 3e-51, Method: Composition-based stats. Identities = 67/313 (21%), Positives = 120/313 (38%), Gaps = 19/313 (6%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 +I + DLNLL +L QE + ++AA R+ ++ A+S L +LR DPLFV +P GL Sbjct: 1 MNIGSKDLNLLYVFHVLYQEGNASRAAARMALSQPALSHKLNRLRDELGDPLFVRAPRGL 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGL--KFELAAESPLMMIMLNALSKQIY 120 +PTP ++ + + + D + + ++L AL ++ Sbjct: 61 TPTPRAHALAPQVQRLVGDLDAFYDACAGHDYLARSEHLHIYTTDYMEQLLLPALLPRLR 120 Query: 121 QRYPQATIKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 + P + N + + + +G D+ +G + LP + L S+ Sbjct: 121 SQAPGVVLVTHNTRGELPREELEKGTCDLAIAGFYEN---------LPDTFHQQRLCSED 171 Query: 180 PCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFE 239 V + +P + +LD FL H+ +D L G +R + L F Sbjct: 172 FVVLASRANPRIADGLDLDAFLACEHLLTTLTGDLNGVVDRALARQGHKRRVVAGLSSFL 231 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 + + LL + + L L+ +P V +WH R Sbjct: 232 APSRLVRGTELLLTCLRSVAEEAVARDPDLVLLPVPFALP-------HVDMMQIWHARTD 284 Query: 300 HNPKIVWLRETIK 312 + WLR+ I+ Sbjct: 285 ADRLRRWLRQQIQ 297 >UniRef50_D2R7I4 Transcriptional regulator, LysR family n=6 Tax=Planctomycetaceae RepID=D2R7I4_9PLAN Length = 288 Score = 204 bits (521), Expect = 3e-51, Method: Composition-based stats. Identities = 33/308 (10%), Positives = 102/308 (33%), Gaps = 22/308 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L+ L + Q + T+AA+ + ++ A+S+S+ KL P+F + T Sbjct: 1 MELDQLRYFLKVAQRGNFTRAAEELMISQPALSRSIQKLEEELGQPVFERKTRSVLLTDA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQAT 127 ++ + + + + + + + A + L + ++ ++P+A Sbjct: 61 GTLLQARSQQVLTILEDTKSEITD-DGQCGRVRVGAIPTIAPYFLPEVLQRFSAKFPKAN 119 Query: 128 IKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRK 186 + ++ D L + +GE+D+ + E+ + + Sbjct: 120 LIVQENTTDVLIKSCRQGEIDLAILVLPVPAKYLEVEELFEEELLLVL----------PP 169 Query: 187 DHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMA 245 H + + +P + + + + + ++ + + + + Sbjct: 170 HHALVEKDKIRVADVEPFPFVLLDEAHCLSDNIVSFCRQRSFQPVVVERTSQLTMVQELV 229 Query: 246 AQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIV 305 ++ P + +Q + + +K + W+ + +V Sbjct: 230 --SLAHGISLIPAMARQCDQSQRRVYRSF-------TGRKPTRTVAVAWNPYRFQSRLLV 280 Query: 306 WLRETIKN 313 RE ++ Sbjct: 281 AFRECLRR 288 >UniRef50_C0BKK6 Transcriptional regulator, LysR family n=1 Tax=Flavobacteria bacterium MS024-2A RepID=C0BKK6_9BACT Length = 308 Score = 204 bits (521), Expect = 3e-51, Method: Composition-based stats. Identities = 50/316 (15%), Positives = 104/316 (32%), Gaps = 27/316 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 + L L + +E + T+AA++ VT +S + KL LF + ++ T + Sbjct: 1 MTLTQLQYTIAVAEEGNFTQAAEKCFVTQPTLSMQVQKLEDELGIKLFNRNTKPITLTTI 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTP-RGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + ++ +N + D + G F L +M +L +++P+ Sbjct: 61 GEKIIDQAKMILKEANRMEDIVSTEKGFVGGNFRLGIIPTVMPTLLPMFLNTFIKKFPKV 120 Query: 127 TIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 +K+ ++ + G++D G + I + L+ + ++ Sbjct: 121 NLKIEELNTAAIIEELKNGKLDAGIAATPLDDVK----------IIEKPLYYEPFVGYIP 170 Query: 186 KDHPALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 + HP +T L + + + + + Q T + FE + + Sbjct: 171 EPHPLSKLKTLALSDLEKMDVLVLEDGHCFRDHVLKICQTPNFSHTFNLKSGSFETLIHL 230 Query: 245 AAQPDNLLLATAPRYCQY---YNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 D L + P L P P +L++ K Sbjct: 231 --ANDGLGMTLLPYLQTRNLTPQNAKNLRSFESPEP---------AREISLIYSKSQLKL 279 Query: 302 PKIVWLRETIKNLYAS 317 P I L TI++L Sbjct: 280 PIIESLSATIESLMRG 295 >UniRef50_Q1GMF7 Transcriptional regulator, LysR family n=1 Tax=Ruegeria sp. TM1040 RepID=Q1GMF7_SILST Length = 295 Score = 204 bits (521), Expect = 3e-51, Method: Composition-based stats. Identities = 37/311 (11%), Positives = 82/311 (26%), Gaps = 27/311 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 + L L + +S T A+R+ ++ AVS +L L + LF + TP+ Sbjct: 1 MTFGQLEIFVALSEAQSFTLTARRLGISQPAVSHALKSLETALNVSLFDRQGSQIVLTPI 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELA-AESPLMMIMLNALSKQIYQRYPQ 125 + + E + +S + + + + + +L L ++ YP Sbjct: 61 GAQLLERAREILGLSRTMQQEAASFRGLDTGSLRIGSFGATSSLQLLPDLMSAFHRAYPG 120 Query: 126 ATIKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 + + D + + +D+GF + + +D + Sbjct: 121 IDVFIEEAADDIIVKWLEERRIDMGFVVLPDD------------RFETIPIATDQFVALV 168 Query: 185 RKDHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 + + L P I + + G + +L Sbjct: 169 PRQSALAKQERVTLSDLCNDPFIMPESGSV--KIVSALFAAAGLTPQTRYRTSQLLSTLS 226 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 M ++ ++ L H +P Sbjct: 227 MV--GRGQGVSVVAEMAVPAAHPDNPWVIR-------PLSPAHPRMIGLALHPTAVRSPA 277 Query: 304 IVWLRETIKNL 314 + K L Sbjct: 278 VTAFLRIAKTL 288 >UniRef50_C3X7G6 Transcriptional regulator n=2 Tax=Oxalobacter formigenes RepID=C3X7G6_OXAFO Length = 291 Score = 204 bits (521), Expect = 3e-51, Method: Composition-based stats. Identities = 38/310 (12%), Positives = 90/310 (29%), Gaps = 25/310 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +D+ L + +E +++AA+R+++ +S L L L + LS T Sbjct: 1 MDIRQLRYFCAIAEEGQISRAAQRLHIAQPPLSYQLKLLEEELGVKLIDRNTRSLSLTKA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQT-PRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 ++ Q + + + + + + + + I + K+ +Q YP Sbjct: 61 GLAFYQRAEQILGLMKVAAIEARDVEYGVNGVLTIGSPPAIGNIYIPERIKRFHQEYPHV 120 Query: 127 TIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + R Y L+ + ++ G + S + + L ++ R Sbjct: 121 RFQWREGNTYRILELLNADMIEFGIARLPVPMGSY----------ESKPLLTESWMAVSR 170 Query: 186 KDHP--ALHQTWNLDTFLRYPHISICWEQSD--TWALDNVLQELGRERTIAMSLPEFEQS 241 D P L+ P I + + + + ++ G + Sbjct: 171 NDDPKWIGKDNIGLEELEGIPLILMQRQAGIHCHDMVIDEMKNKGVNADVFCESDNISAI 230 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 L + + + + +L+ +LW K + Sbjct: 231 LSLVEAELGIAILPVSTLSVRPSG---------DFHAMAIANCQLQSSSAILWKKDKPLS 281 Query: 302 PKIVWLRETI 311 E Sbjct: 282 AAAKLFLEMF 291 >UniRef50_B0T3V7 Transcriptional regulator, LysR family n=1 Tax=Caulobacter sp. K31 RepID=B0T3V7_CAUSK Length = 294 Score = 204 bits (521), Expect = 3e-51, Method: Composition-based stats. Identities = 41/312 (13%), Positives = 86/312 (27%), Gaps = 22/312 (7%) Query: 7 TLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTP 66 + L + + S T+AA+ + ++ A++ + + LF S + T Sbjct: 2 HITLGQIRAFVTVASTFSFTRAAEVLGLSQPALTNRIRQFEESLGLRLFDRSTRSVELTN 61 Query: 67 LMVSMEQNLAEWMQMSNLLLDKPHHQTP-RGLKFELAAESPLMMIMLNALSKQIYQRYPQ 125 + + + + LA +L L + P Sbjct: 62 VGRELLPIFRRLVGEFEGAVINARDYASKVKGVVRLACLPSCAATLLPDLIARFQIDNPS 121 Query: 126 ATIKLRN-WDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 AT + + + + VD G + ++ LF D V Sbjct: 122 ATFVVEDALNSRVATMVREDRVDFGIGMADGEAG----------DLELTRLFDDTLQVVH 171 Query: 185 RKDHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 ++HP +++T YP I + S ++ GR T A + ++ Sbjct: 172 PREHPIAQAPVIDVETLSHYPLILMNRGSSVRDLVEGAFLAAGRTATPACEVTYMSTAVA 231 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 + L L+ P + L+ + P Sbjct: 232 LVRA--GLGLSILPSTAVELRSQ-------PDVAARSIDDPAFVRTLVLVRRRNAPLRPV 282 Query: 304 IVWLRETIKNLY 315 + ++I Sbjct: 283 VEAFIDSIFAAV 294 >UniRef50_Q21IY2 Transcriptional regulator, LysR family n=2 Tax=Gammaproteobacteria RepID=Q21IY2_SACD2 Length = 299 Score = 204 bits (521), Expect = 3e-51, Method: Composition-based stats. Identities = 49/310 (15%), Positives = 104/310 (33%), Gaps = 25/310 (8%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 IT++D + L + + S + AA+ + +T AVSK +A L + LF ++ Sbjct: 2 ITSMDTDGLKAFLAVAEHHSFSVAAQHLFITQPAVSKRIAALEQELNHILFDRLGRDVAL 61 Query: 65 TPLMVSMEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQIYQRY 123 T ++ + + + +A + + L + ++ + Sbjct: 62 TEAGQALLPRAQAILNSMHEAQRTIREFSGEIVGTLRVATSHHIGLHHLPPILREFAANH 121 Query: 124 PQATIKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCV 182 Q ++ D + + + RG+ D+ L +L ++ VL+ D C Sbjct: 122 KQVNLQFDFLDSEQAHEKVLRGDCDLAVVT---------LAPTLEENLEASVLWPDPLCF 172 Query: 183 WLRKDHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQS 241 + +HP + +L+ R P I + + G + M+ E Sbjct: 173 IVGANHPLATSKNISLEELSRTPAILPDLNTYTGRLVKHFFDTQGLALNLNMATNYLETI 232 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 M L + P+ +V L + +LE ++ HK+ + Sbjct: 233 KMMV--TVGLGWSVLPK-----------TMVDSSLKILPIKNIQLERQLGVVIHKKRTLG 279 Query: 302 PKIVWLRETI 311 E + Sbjct: 280 NAARAFFEVL 289 >UniRef50_D0J615 Transcriptional regulator, LysR family n=2 Tax=Comamonas testosteroni RepID=D0J615_COMTE Length = 306 Score = 204 bits (521), Expect = 3e-51, Method: Composition-based stats. Identities = 54/321 (16%), Positives = 107/321 (33%), Gaps = 23/321 (7%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 L L + L Q +S +AA ++++ SA+S +A++ A LF + + Sbjct: 1 MVDANLSTKDLRAVVALSQTKSFGQAALLVHLSQSALSALIARVEAQIGARLFERTTRAV 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHH-QTPRGLKFELAAESPLMMIMLNALSKQIYQ 121 T + E ++ + L R +AA L +L + + + Sbjct: 61 ELTDAGHVFIAHAQEILRDTQRALRAVTDTVQLRTGSVTVAALPSLAASLLPKVFAEFTR 120 Query: 122 RYPQATIKLRN-WDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 +P + L + + D + G+VD + + + YE L D Sbjct: 121 IHPGVRLSLLDTLSGPAFDLVRDGKVDFALTAADPKQE----------DLAYEQLMEDQF 170 Query: 181 CVWLRKDHPALH--QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEF 238 + DHP ++ L YPH+S+ S +D L G + Sbjct: 171 FLICPDDHPLSKHAGPVAIENTLDYPHVSMPSSASVRQYIDADLHSKGLYFAPVFEVDHI 230 Query: 239 EQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRN 298 + + L ++ P Q +L + L P ++ P ++ + Sbjct: 231 ATIGALVSA--GLGISALPETAVSLLQAGRLVQIPLSPP-------GIQRPLGMVMRRHA 281 Query: 299 SHNPKIVWLRETIKNLYASMA 319 + L I+ ++A Sbjct: 282 PRSSAAKALEALIRASLHNLA 302 >UniRef50_C1YJH3 Transcriptional regulator, COG0583 n=1 Tax=Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 RepID=C1YJH3_NOCDA Length = 302 Score = 204 bits (521), Expect = 3e-51, Method: Composition-based stats. Identities = 50/287 (17%), Positives = 91/287 (31%), Gaps = 9/287 (3%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 + + L L L+ + + SVT AA+ + V+ S VS +L+ L A LFV SP G+ P Sbjct: 1 MGDVSLRQLEYLRAIARLGSVTAAARELFVSQSTVSTALSDLEAALGVTLFVRSPKGMRP 60 Query: 65 TPLMVSMEQNLAEWMQMSNLLLDKP-HHQTPRGLKFELAAESPLMMIMLNALSKQIYQRY 123 T + L + + + + + I+L + + +RY Sbjct: 61 TASGQRALAVADDVRASLEQLRETASREREEVEGDLTIGCYATIAPILLPRVIAEFSRRY 120 Query: 124 PQATIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCV 182 PQ + + LD + +D+ + R + + + L SD P Sbjct: 121 PQVRLSFVEASHGTLLDDLLNSRIDLAITYHYELASVRPAV-----GVASQWLRSDPPYA 175 Query: 183 WLRKDHPA-LHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQS 241 D P L P I + G + FE Sbjct: 176 LTPVDGPLSAKGELTLADLAVEPLILFDLPPGG-DYFLGLFDRAGLTPNVRFRTTSFEMV 234 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEV 288 + A+ L T + + L + + + + + Sbjct: 235 RALVARGLGNALLTQRTVLERSYEDLPYATRELDIRSEGLGIEVMRL 281 >UniRef50_Q1QYT3 Transcriptional regulator, LysR family n=1 Tax=Chromohalobacter salexigens DSM 3043 RepID=Q1QYT3_CHRSD Length = 317 Score = 204 bits (521), Expect = 3e-51, Method: Composition-based stats. Identities = 48/315 (15%), Positives = 112/315 (35%), Gaps = 20/315 (6%) Query: 7 TLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTP 66 L L L L R++ +AA+R+ ++ A SK L +L LF P G++P Sbjct: 13 RLKLRHLQLFIALDDLRNLHRAAERLGMSQPAASKLLGELEGQLGLALFERHPRGITPNW 72 Query: 67 LMVSMEQNLAEWMQMSNLLLDKPHHQ-TPRGLKFELAAESPLMMIMLNALSKQIYQRYPQ 125 ++ ++ + + D+ + + + +L + +++++ P Sbjct: 73 YGETVIRHARGILSSLHQAGDELNALQAGSAGSVSVGTVMAPAVTLLTSAVERVHRDRPN 132 Query: 126 ATIKL-RNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 + + + ++ + + GE D + S + +E + + C Sbjct: 133 LKVSIDVDVSHELIPRLVEGEFDFAIARIPSTLPAG--------DFVFEEIGEEALCFVC 184 Query: 185 RKDHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRE-RTIAMSLPEFEQSL 242 R HP +T NL+ + YP + +D++ G + P+ +L Sbjct: 185 RAGHPLADRTSLNLEAMVEYPWVLQPPGALMRQRVDHLFLHHGVALPRQIIDTPDILVAL 244 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 M + D + + T + + + ++ P P+ L+ + +P Sbjct: 245 AMVDKSDTVTVTT-RQVAELLCDQPRFRILPFPEALSVQ-------PYGLVSLREQRLSP 296 Query: 303 KIVWLRETIKNLYAS 317 L +++L Sbjct: 297 GAAALMSALRDLIRE 311 >UniRef50_C6CDR8 Transcriptional regulator, LysR family n=27 Tax=Bacteria RepID=C6CDR8_DICDC Length = 300 Score = 204 bits (521), Expect = 3e-51, Method: Composition-based stats. Identities = 44/318 (13%), Positives = 95/318 (29%), Gaps = 28/318 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L + L +++ T+AA + +T ++S ++++L LF + T Sbjct: 1 MNLKQLHYFKRLAEKQHYTEAASSLYITQPSLSHAISELEKELGVSLFERHGRNVRITQS 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQ-TPRGLKFELAAESPLMMIMLNALSKQIYQ--RYP 124 + + P LA + ++ L + Sbjct: 61 GKIFLPYVEGALLELENGRTALKKMCAPHDEVINLAFIYTMGETVVPQLIDRFIHIPENK 120 Query: 125 QATIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVW 183 + + + D+ I++ L S + Sbjct: 121 NKRFSFFQGTTLSIVQDLKEDKFDMALCSHIPDEP----------DIEFIPLISQELVLV 170 Query: 184 LRKDHPALHQ---TWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQ 240 +DHP + +L+ + YP I + +D + + IA + E Sbjct: 171 TSRDHPLAQRHDSEIDLEEAIAYPFIFFSQKSGLRQFIDKIFMQKKLIPEIACYVEEDTA 230 Query: 241 SLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 + + N +A PR + ++ L + L HK + Sbjct: 231 MVGLV--SINYGIAIMPRISTL--SHSNVQVMRL-------RNPGQTRYVYLATHKDRTL 279 Query: 301 NPKIVWLRETIKNLYASM 318 +P V ++ + N SM Sbjct: 280 SPAAVSFKQFVLNACQSM 297 >UniRef50_B4ETB5 LysR-family transcriptional regulator n=7 Tax=Enterobacteriaceae RepID=B4ETB5_PROMH Length = 297 Score = 204 bits (521), Expect = 3e-51, Method: Composition-based stats. Identities = 36/302 (11%), Positives = 88/302 (29%), Gaps = 22/302 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +D+ +L ++Q ++AA + +T A+S+S+ KL L + G+ T Sbjct: 1 MDIRVLRYFIEVVQLNGFSRAADALFITQPAISRSIKKLEDELGTVLLIREVDGVKLTDD 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQT-PRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + ++ + + N + + + P + + + R+P Sbjct: 61 GAILYEHAKQILAQFNSMNKALNDKDEPLTGALNVGLPPVIASTYFADIIMAFSSRHPNV 120 Query: 127 TIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 +K+ DA+ G V + +L + + D + + Sbjct: 121 ELKIFELGTKQMEDAMLEGTV----------ETAAVMLPFNDKDFELTIFSEDHLMLLVA 170 Query: 186 KDHPALHQ-TWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 + HP N + I + + + E I + + M Sbjct: 171 QSHPLAKDKKVNFKQLITERFIFFSEDFRINDLVRSACGIYNTEPQIVGRSNHLDLIIAM 230 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 + + P + L ++ +L L ++ + + Sbjct: 231 VKA--GVGITLLPNSMCNKYPIDDLVVIP-------ITSPRLSYQLALATNQNSYQSRSC 281 Query: 305 VW 306 Sbjct: 282 QA 283 >UniRef50_B1K332 Transcriptional regulator, LysR family n=6 Tax=Burkholderia RepID=B1K332_BURCC Length = 302 Score = 204 bits (520), Expect = 3e-51, Method: Composition-based stats. Identities = 44/315 (13%), Positives = 96/315 (30%), Gaps = 25/315 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L + E T+AA R+++ +S+ + +L LFV P G T Sbjct: 1 MELRQLRYFLAVADEGQFTRAAARLHIQQPPLSQQIQELEHELGFALFVRQPRGAVLTAP 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMI-MLNALSKQIYQRYPQ 125 + N + +A S + + YP Sbjct: 61 GEIFAARARTVLLELNNAVVHARRVAQGRIGTVRVALTSSAAFHPLTPTAIRNFRDMYPG 120 Query: 126 ATIKLRNWD-YDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 +I++ + + ++ + G D + + + +E+L + + L Sbjct: 121 ISIEMSEVNAAEIIEMMLNGRADAAILRKPVETSA---------DLRFELLAEERMLLVL 171 Query: 185 RKDHPAL-HQTWNLDTFLRYPHISICWEQSDTWALD--NVLQELGRERTIAMSLPEFEQS 241 H + ++ +L I + + D Q G E + +P + Sbjct: 172 PVGHRLIGGRSVSLKQLANESFIFVRRPGAPGMYADFIRACQAKGFEPHVVEEVPRMVTA 231 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 + + A ++ P Q Y + + + + P L+ + + N Sbjct: 232 INLVAA--GGGVSLVPASMQRY-RQESVRYCRV------AGDHAFRAPLHLVT-RHDLQN 281 Query: 302 PKIVWLRETIKNLYA 316 P RE + Sbjct: 282 PAASHFREALLMFVQ 296 >UniRef50_D0Z9H4 Transcriptional regulator, LysR family n=40 Tax=cellular organisms RepID=D0Z9H4_EDWTE Length = 302 Score = 204 bits (520), Expect = 3e-51, Method: Composition-based stats. Identities = 45/313 (14%), Positives = 105/313 (33%), Gaps = 22/313 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 + + L + + +A+ R+N++ A+S ++ L LFV + + TP Sbjct: 3 MSIKQLRAFLAVAHTLNFAQASVRLNLSQPALSLAIRSLEDALGGALFVRTTRQVRLTPE 62 Query: 68 MVSMEQNLAEWMQMSNLLLDKPH-HQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + + + + + T + K +AA L + ++ +RY Sbjct: 63 GEAFFPLVRQLLVDWDNTTETIRQRFTLQVGKVAIAAMPSFAANPLPFILQRFRRRYAGV 122 Query: 127 TIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + + + + + I G V++G + + + L + + Sbjct: 123 NVVVHDVINEAVYEMIAEGRVEMGIAFEPEPGA----------RLHFTPLGMNRFIAIVP 172 Query: 186 KDHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 P Q L I++ S L+ L + G++ +A + M Sbjct: 173 PGCPFARQQDIGWRQLLSLDFITLQRPSSMRLLLEQRLAQNGKQLPVAFESHQLITVGNM 232 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 A + L ++ P +C + + L P E++ +L+ H + Sbjct: 233 VA--NGLGVSAVPAWCARQMRQLGAVCLPLIEPVIENRFGL----VSLMHHP---FSCAA 283 Query: 305 VWLRETIKNLYAS 317 + +TI + Sbjct: 284 QAMADTICEYAQA 296 >UniRef50_A8TZA8 Transcriptional regulator, LysR family protein n=1 Tax=alpha proteobacterium BAL199 RepID=A8TZA8_9PROT Length = 308 Score = 204 bits (520), Expect = 3e-51, Method: Composition-based stats. Identities = 52/314 (16%), Positives = 103/314 (32%), Gaps = 22/314 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +DL L Q +++ S ++AA+ + ++ AVS+ +A L A PLF+ S G++PT Sbjct: 1 MDLRALRYFQAVVEFGSYSRAAESLRISQPAVSRQVAHLEAELGRPLFMRSGHGVTPTEA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTP-RGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + ++ + + LA ++ L ++ P A Sbjct: 61 GRLLFERSQAILRQVENVTSEIQGADTDLAGTLTLAVPPGAGHFLMPELVRRFRADCPGA 120 Query: 127 TIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL- 184 +K+ + + RG VD+ + + L + + Sbjct: 121 FLKVVAGYSGYIHEWLIRGRVDVA----------CLHGALPQRGFEVIPLVDEEVFLVGQ 170 Query: 185 RKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 P P I S LD L LG ++M + + + Sbjct: 171 PNAAPFSRGYAQARDLSELPLILPGRPNSSRRLLDETLSTLGITPFVSMEIDDTSMVRSL 230 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 Q L + + +Y + L A+P + P ++ +P + Sbjct: 231 LKQGLGYSLLSQGAFVEYVARGE---LSAVPF------RPGAYWPLAMMLSTTRQRSPLV 281 Query: 305 VWLRETIKNLYASM 318 L TI+ + Sbjct: 282 DLLIATIRATVGDL 295 >UniRef50_A8RPQ8 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=A8RPQ8_9CLOT Length = 296 Score = 204 bits (520), Expect = 4e-51, Method: Composition-based stats. Identities = 39/308 (12%), Positives = 91/308 (29%), Gaps = 21/308 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 + L + + S+T AA ++ + ++S +++++ ++ LF L T Sbjct: 1 MTFRHLKIFVTVCETGSMTAAASQLFIAQPSISLAISEMEDYYGVKLFDRISRKLYLTEN 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQAT 127 Q + + + + + ++ + +L K++ Q+YP Sbjct: 61 GRRALQYARHIIDLLDEMEQGVRDVD-AMGRLKVGTSITIGTYLLPGYIKKLKQQYPALK 119 Query: 128 IKLRNWDYDSLD-AITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRK 186 ++ + +++ I ++D+G +H I E D Sbjct: 120 VEASIANSGTIEQQILDNDIDVGIIEGVAHSPF----------ILSESFAGDRLVFICPA 169 Query: 187 DHPALHQTW-NLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMA 245 H +T L I + D +L + L Sbjct: 170 GHEFAGKTLEELSEVRNQDFILREKGSAGREIFDGILAAQELNVRPIWQSASNQVILQGV 229 Query: 246 AQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIV 305 L ++ P + + L + L +++++HK Sbjct: 230 KA--GLGISILPYFLVRQDIREG------ELAEFRIKDLALNRKYSVIYHKNKFLPRSAR 281 Query: 306 WLRETIKN 313 L E K Sbjct: 282 TLMELCKE 289 >UniRef50_Q1V682 Putative transcriptional regulator protein n=1 Tax=Vibrio alginolyticus 12G01 RepID=Q1V682_VIBAL Length = 304 Score = 204 bits (520), Expect = 4e-51, Method: Composition-based stats. Identities = 49/297 (16%), Positives = 101/297 (34%), Gaps = 23/297 (7%) Query: 7 TLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTP 66 + L L +E++ T AA+++++T SA+S+ + KL L+ + T Sbjct: 2 DISYRQLKAFIALAEEQNFTYAAEKVHITQSALSQMMKKLTQQLTSELYQRQGRKIILTE 61 Query: 67 LMVSMEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQIYQRYPQ 125 + Q + + L+ + + +++ L + + +RYP Sbjct: 62 AGEQLYQEARFIVNRLDKLVQQNKDRQHGYNKSLVVSSLYTLCASLAPKTLNDLKKRYPD 121 Query: 126 ATIKLRNWD-YDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 T +L D ++ +G+ DIG + + +++++LF D C Sbjct: 122 FTFRLIEERVDDITHSVLQGQADIGINTNPN-----------HPELNFDLLFRDYLCFVC 170 Query: 185 RKDHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 R+DHP H+ + + +Y I + S D Q +G +S L Sbjct: 171 RQDHPLAEHKQVSWEQAHQYASIGVSPGNSLRTLADEAFQRIGLTYDPELSASHTSTLLG 230 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 M L + + + +P+ L+ K Sbjct: 231 MI--SSGLGSTILSSTIGELSN--NVEVRFIPIVQPVQY-----RSVGLITRKETHR 278 >UniRef50_Q12DG5 Transcriptional regulator, LysR family n=1 Tax=Polaromonas sp. JS666 RepID=Q12DG5_POLSJ Length = 289 Score = 204 bits (520), Expect = 4e-51, Method: Composition-based stats. Identities = 41/293 (13%), Positives = 90/293 (30%), Gaps = 25/293 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +DL L + +E S ++AA R++++ +S+ +AKL L + S ++ T Sbjct: 1 MDLRQLSYFVAVAEELSFSRAASRVHISQPPLSRQIAKLEQELGAVLLIRSSHEVALTQA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKP-HHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 ++ + + ++ + + + + + AL Q Q YP Sbjct: 61 GQALLEEARRLLALAAGIPEVVGRASRGETGSLRIGFVGSTIYTSVPALLSQYRQIYPHV 120 Query: 127 TIKLRNWD-YDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + ++ + E+D+G + + LF + L Sbjct: 121 AVSVQQLTVARQTVMLKNSEIDVGIIRQAVTEP----------WLATRSLFKEGFMAALP 170 Query: 186 KDHPALH-QTWNLDTFLRYPHISICWE--QSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 H L + + + L + + G I + Sbjct: 171 VHHRLAGQDRVMLQSLAEDDFVFFSRSEAPAIHEQLRKMCEAAGFSPRIVQEAYPMSTVV 230 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWH 295 + A + +A P Q + L + + + + F L WH Sbjct: 231 GLVAA--GVGIAIVPESMQRLQMQNVL--------YRALRGTRAKTEFFLAWH 273 >UniRef50_C9ABQ3 Transcriptional regulator n=1 Tax=Enterococcus casseliflavus EC20 RepID=C9ABQ3_ENTCA Length = 299 Score = 204 bits (520), Expect = 4e-51, Method: Composition-based stats. Identities = 48/314 (15%), Positives = 112/314 (35%), Gaps = 26/314 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L +L +E T+++K +N+T ++S +++ L LF + ++ T Sbjct: 1 MNLQHLKYFDVLAREEHYTRSSKLLNITQPSLSNAISLLEDELGVQLFEKNGRNVALTKP 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQ-- 125 +++ ++ + +D + A L + ++KQ + P Sbjct: 61 GKIFHEHVIRTLENLDSGIDTVTKISKGFGHISFAFLQVLGTSYVPKVTKQFLEANPGKK 120 Query: 126 ATIKLR--NWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVW 183 + + +++ + D+G ++ + I++ + S V Sbjct: 121 IQFEFHSDSVSTETVQGLKTLRYDLGICSYITNEPT----------IEFVPIASQELVVI 170 Query: 184 LRKDHPALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 +HP +L+ YP I + + +D++ Q +A + + Sbjct: 171 TALNHPLAQFDEVSLEDLAEYPQIIFSKKSALREIIDDLYQRNNVSYQVAYEVKIDQVIA 230 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 + +Q NL +A P L +LPL + + E F L ++K P Sbjct: 231 GLVSQ--NLGIAIIPNMTM---------LDSLPLKRIKLKDIGWERYFYLAYNKETYLPP 279 Query: 303 KIVWLRETIKNLYA 316 + ++ I Sbjct: 280 VVSNFKDFILAHAD 293 >UniRef50_B6FPK4 Putative uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FPK4_9CLOT Length = 301 Score = 204 bits (520), Expect = 4e-51, Method: Composition-based stats. Identities = 49/308 (15%), Positives = 108/308 (35%), Gaps = 21/308 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 + + L ++ Q+ S+TKA++ ++V+ +VS ++ +L ++ LF LS T Sbjct: 1 MTIRHLRTFVIVFQKESITKASEILHVSQPSVSLAIQELENYYHIRLFDRIGKRLSITEQ 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQAT 127 + + M + + + + + + +L L ++ +RY + Sbjct: 61 GKWLYDYALHIVSMFDEMETEVKTWNN-KGTLRIGSSITIGNFILPQLIEEFQKRYREVE 119 Query: 128 IKLRNWDYDSLDA-ITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRK 186 IK+ + +++ I EVD+ ++ I E L D C+ Sbjct: 120 IKVSVCNTKTIEQYILNNEVDLALIEGKTEYEQ----------IQMEHLMEDPLCLICAA 169 Query: 187 DHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMA 245 + + Q +L RYP I + ++ L + + + Sbjct: 170 NSELVKQEKISLIDLERYPMILRERGSAVREMIEESLGYHQIHHRVIWESVSTQAIIRAV 229 Query: 246 AQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIV 305 A+ L ++ P L + + ++ L F++ +HK+ P Sbjct: 230 AKK--LGISILPYLLVRDELARGL------VKQLQVEEFHLSRQFSIAYHKKKYLTPAAK 281 Query: 306 WLRETIKN 313 E K Sbjct: 282 GFMELCKE 289 >UniRef50_A0KPM6 Transcriptional regulator, LysR family n=2 Tax=Gammaproteobacteria RepID=A0KPM6_AERHH Length = 297 Score = 204 bits (520), Expect = 4e-51, Method: Composition-based stats. Identities = 43/310 (13%), Positives = 91/310 (29%), Gaps = 25/310 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +D+ L L++E+S T+A++++ VT +SK + + PL + + T Sbjct: 1 MDIRALRYFVELVREQSFTRASEKLFVTQPTISKMIRNMEEELGQPLLSRAGRRFTLTDS 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + L + + L + + L + RYP+ Sbjct: 61 GRVLFNRAQTILAEMQQLEAELADLQSLQFGRLALGIPPMVGHVY-ADLIRAYRSRYPKV 119 Query: 127 TIKLRN-WDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + + A+ GE+D+ + + + L V L Sbjct: 120 ELSIVEYGGRRIEQAVLEGELDLAITMLPTKEGGA---------LSALELDQYPIQVVLP 170 Query: 186 KDHPALHQ--TWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 D P L+ P + + + L+ + G E +A +++ Sbjct: 171 -DLPRWRDCPEIRLEALCDEPFLLYTQAFTLSERLEQACRVAGFEPQVAARSSQWDFLTA 229 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 M + +A P L L L +L ++W + Sbjct: 230 MVRS--GMGVAFLPEPICRRLAPDGLVLRPL--------VPELSWRLGVIWPSERYLSRT 279 Query: 304 IVWLRETIKN 313 + Sbjct: 280 AEAWLALCRE 289 >UniRef50_A8FAC2 Possible LysR family transcriptional regulator n=21 Tax=Bacillus RepID=A8FAC2_BACP2 Length = 329 Score = 204 bits (520), Expect = 4e-51, Method: Composition-based stats. Identities = 32/313 (10%), Positives = 92/313 (29%), Gaps = 28/313 (8%) Query: 7 TLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTP 66 +DL + ++ +E + ++AA+R+ + +S+ + KL LF + + + Sbjct: 32 KMDLRQIRYFIMVAEELNFSRAAERLKMAQPPLSQEIRKLEEQLGVTLFHRTRRQVELSD 91 Query: 67 LMVSMEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNALSKQIYQRYPQ 125 + + + + + M++ + K+ + +P Sbjct: 92 SGRVFLEEARRTLLQVDRTIKATQLADDGKIGHLTIGFVDSTDMVI--DIIKRFRESFPN 149 Query: 126 ATIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 + L L A+ + E+ IGF + + + E+ + + L Sbjct: 150 IHLVLCEMATEQQLKALHKKEIQIGFIRSNQNNKI----------LTSEICCEESLSLVL 199 Query: 185 RKDHPALH-QTWNLDTFLRYPHISICW--EQSDTWALDNVLQELGRERTIAMSLPEFEQS 241 ++HP + P I + + + E + + Sbjct: 200 PENHPLASFPKVPIHLLANEPFIMFPRHLGAAFYDLIISYFWENNISLNVVQEAVQMHTI 259 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 + + A + + + + + Q+ V + W + + + Sbjct: 260 VNLVAAGMGI----------SVVPSSVESVKRSGVVYRKIQETTPRVNLYVSW-RHDETS 308 Query: 302 PKIVWLRETIKNL 314 ++ Sbjct: 309 TVAQHFLTVVREA 321 >UniRef50_C6CZP2 Transcriptional regulator, LysR family n=5 Tax=cellular organisms RepID=C6CZP2_PAESJ Length = 300 Score = 204 bits (519), Expect = 4e-51, Method: Composition-based stats. Identities = 47/303 (15%), Positives = 100/303 (33%), Gaps = 22/303 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++++ L L + + S KA + +N+T AVS + L F L + ++ T Sbjct: 1 MNISQLETLLTISKTMSFRKAGELLNLTQPAVSAQIKTLEEEFKTVLIDRN-QPVTLTDH 59 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 ++ + + L K L S + + +L + +YP Sbjct: 60 GKVFLEHAERILAVVEELKQKLSDLNAIPQGHIVLGTTSSMAIQILPRVLSYFQDQYPLI 119 Query: 127 TIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + L ++ G VD+G + +S +D +L+ D + Sbjct: 120 KTTIHTMPSSQVLASVENGSVDMGITY----------ISEKNPNMDSSILYYDSFVLVAS 169 Query: 186 KDHPALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 HP +D YP I + + LD + ++ + I M L E+ M Sbjct: 170 PAHPLSQVAHTTIDMIKDYPFIMLAPDTLGRRFLDQIFKKNNIQPNIIMELSSSEEVKRM 229 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 + + + +L L ++ + + + P +++ N + Sbjct: 230 VEINLGIAVVSKLSIANEL-RLGSLKIIKV-------TELEPYHPVAVVYKSGRYLNTAM 281 Query: 305 VWL 307 Sbjct: 282 QQF 284 >UniRef50_A6VUM5 Transcriptional regulator, LysR family n=2 Tax=Gammaproteobacteria RepID=A6VUM5_MARMS Length = 306 Score = 204 bits (519), Expect = 4e-51, Method: Composition-based stats. Identities = 49/313 (15%), Positives = 101/313 (32%), Gaps = 22/313 (7%) Query: 7 TLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTP 66 L + L L S T+AAKR N++ A S +A L LF + Sbjct: 2 NLSIKQLRAFLALSDHDSFTQAAKRFNLSQPAFSTLIASLEDEIGYRLFDRDTRKVELNA 61 Query: 67 LMVSMEQNLAEWMQMSNLLLDKP-HHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQ 125 + + + + +++ + + L+ L + L + Q +PQ Sbjct: 62 NGIHFIEIARRLILDYDEAINEIEARASGKNGTLTLSVLPSLAVEWLPEILAQYSTMHPQ 121 Query: 126 ATIKLRNWDYDS-LDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 IKL + ++ L +I + D+ + + D LFSD + Sbjct: 122 TQIKLNDTQWNQCLKSIVNSQADLALTASQPATNI----------FDSHYLFSDKFYLLC 171 Query: 185 RKDHPALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 +HP + L +YP I S D + + G+ ++ + + + Sbjct: 172 HVNHPLAQNKKVKLSDLYKYPFIGFSQRTSIRQYTDKLFESQGKLIKYSLEVQQLTTMMG 231 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 + + + + + + + +V + LE L+ K + Sbjct: 232 LISANYGIGIT--SGLTLFQFKHQNIAIVPF-------EDVDLERDIYLVSLKNRAQPSH 282 Query: 304 IVWLRETIKNLYA 316 + + I N Sbjct: 283 VKLFADFIMNEAN 295 >UniRef50_C8KY54 Transcriptional regulator, LysR family protein n=1 Tax=Actinobacillus minor 202 RepID=C8KY54_9PAST Length = 327 Score = 204 bits (519), Expect = 4e-51, Method: Composition-based stats. Identities = 47/325 (14%), Positives = 103/325 (31%), Gaps = 39/325 (12%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 + + + +ERS + AAK++ ++ ++S+ + K+ PLF S L T + Sbjct: 1 MIFRQFKYVLKVAEERSFSHAAKKLFISQPSLSQFIQKVEEEVGAPLFDRSISPLKLTYI 60 Query: 68 MVSMEQNLAEWMQ---MSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYP 124 Q+ M +D + + ++ + +L + ++YP Sbjct: 61 GELYIQHAKAMMDLQCQFEQKIDDV--LNVKRGRVKIGSSPFRSAYLLPRVLPIFNEKYP 118 Query: 125 QATIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVW 183 + L+ + + + G++D+ S DYE LF + + Sbjct: 119 HIDVFLKEDSTKNLEEGVASGQLDLAISLLPVDE----------KRFDYEFLFEERMLLA 168 Query: 184 LRKDHPALH------------QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTI 231 + H + +L F P I + L + +++G I Sbjct: 169 IPPQHEIAQKLELKAGNYTDLKAVSLQDFADTPFIQMHKSHKLHRMLISECEKVGFTPHI 228 Query: 232 AMSLPEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFT 291 A+ + + + A P L + + KL Sbjct: 229 ALETESMTTAQAL--AGIGIGAALLPET---------LVIKNHVDKAPCYVELKLRRSAV 277 Query: 292 LLWHKRNSHNPKIVWLRETIKNLYA 316 +++ K + + +TIK Sbjct: 278 IIYRKESYLSRATRAFIQTIKQATQ 302 >UniRef50_Q1QWP3 Transcriptional regulator, LysR family n=1 Tax=Chromohalobacter salexigens DSM 3043 RepID=Q1QWP3_CHRSD Length = 296 Score = 204 bits (519), Expect = 4e-51, Method: Composition-based stats. Identities = 45/310 (14%), Positives = 96/310 (30%), Gaps = 22/310 (7%) Query: 7 TLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTP 66 + L +++ +V AA+++ ++ SA S++LA L LF L Sbjct: 4 HVTFRQLQVFVAVIRGGAVNAAARQLRLSQSATSQALADLERQLGVVLFERLGRRLELND 63 Query: 67 LMVSMEQNLAEWMQMSNLLLDKPHHQTP-RGLKFELAAESPLMMIMLNALSKQIYQRYPQ 125 + + + + L+D +AA + + +L L+ + +R+P Sbjct: 64 AGRRLLPYAEKVLNGLDELVDAAREPDGELRGTLHVAASATIGTYLLPMLAGRFIERHPA 123 Query: 126 ATIKLR-NWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 ++LR D + I R + D+G + + E+ D V Sbjct: 124 VDLQLRLRNTEDVMRDIQRFDADLGLIEGQCSES----------RLVSELWCQDEMVVVA 173 Query: 185 RKDHPA-LHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 HP ++ I + + + M L + E Sbjct: 174 APQHPLAARDGLGVEELQAAQWILREPGSGTRAIFEAAIHPHVERIRVRMELDQHEAIKQ 233 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 L + + + L + +L F+L+WH +P Sbjct: 234 AVRAGFGLGCLSRLSVAGELERGELVALRSP---------LQLTRSFSLVWHPERYRSPL 284 Query: 304 IVWLRETIKN 313 + +++ Sbjct: 285 WQAFKVFLRD 294 >UniRef50_B8IVY8 Transcriptional regulator, LysR family n=4 Tax=Proteobacteria RepID=B8IVY8_METNO Length = 341 Score = 204 bits (519), Expect = 5e-51, Method: Composition-based stats. Identities = 71/338 (21%), Positives = 128/338 (37%), Gaps = 41/338 (12%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 + LDLNL+ +M+ER V +A + + ++ SAVS L +LR D LFV + G+ P Sbjct: 12 LNRLDLNLIRLFDAVMRERHVARAGQSLGLSQSAVSHGLRRLRTLIGDDLFVRTVQGMEP 71 Query: 65 TPLMVSMEQNLAEWMQMSNLLLDKPH-HQTPRGLKFELAAESPLMMIMLNALSKQIYQRY 123 TP ++M + + + + +F LAA + ++ AL + Sbjct: 72 TPRALAMAVQVRDALTAIEGAIGPQRFDPASSTRQFRLAATDHITAVVAPALMRTFETEA 131 Query: 124 PQATIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCV 182 P A+I +R D + G++DI + S +P + LF D + Sbjct: 132 PLASILIRPATRIDLTMQVDLGQIDIVVG----------IFSQIPHRLHARTLFEDRDVL 181 Query: 183 WLRKDHPALHQTWNLDTFLRYPHISICWEQS---------------------DTWALDNV 221 DHP ++ T R P + + + D AL+ Sbjct: 182 VTAPDHPEAGGATDIRTLARDPLMVVTVGGTEDGLPDGRLSERGLTRQTEMFDRDALNRA 241 Query: 222 LQELGRERTIAMSLPEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDES 281 + G +++ P F + A +A P + + + V++P Sbjct: 242 FRAAGLVPRLSVLQPHFLAVPSLLADSRR--VAIVPASLAHGFEAAGVARVSMP------ 293 Query: 282 QQKKLEVPFTLLWHKRNSHNPKIVWLRETIKNLYASMA 319 + + ++WH+R +P WLRE + +A Sbjct: 294 PWEPRTMAVQMVWHERWRQDPAHAWLREALFRASRGIA 331 >UniRef50_A0QCY6 Transcriptional regulator, LysR family protein n=4 Tax=Corynebacterineae RepID=A0QCY6_MYCA1 Length = 294 Score = 204 bits (519), Expect = 5e-51, Method: Composition-based stats. Identities = 43/296 (14%), Positives = 84/296 (28%), Gaps = 24/296 (8%) Query: 16 LQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSMEQNL 75 L + + VT AA++++V +++ LA+L LF LS ++ Sbjct: 9 FITLAELQHVTAAAEQLHVAQPTLTRMLARLEQRLGVALFDRHGRRLSLNTYGRIFYEHA 68 Query: 76 AEWMQMSNLLLDKPHHQ-TPRGLKFELAAESPLMMIMLNALSKQIYQRYPQATIKLRNWD 134 + P + LA S ++ L + + P+ T L Sbjct: 69 RRAQLELDSARRAIADLADPAVGEIRLAYLSSFGSTVVPRLIARFKESSPRVTFTLEEGA 128 Query: 135 YDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPALHQ 193 +S+ D + G VDIG R+ + + LF V + H Sbjct: 129 AESIADRVRSGGVDIGVVSPRPVERT----------LAWRSLFRQRLGVAVPDGHRFARG 178 Query: 194 -TWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQPDNLL 252 ++ P +++ LD + +A+ P + + A L Sbjct: 179 AAVSMVDLADEPFVTMHPGFGMRRLLDELCAAAQFRPRVALQAPNLTTAASLVAA--GLG 236 Query: 253 LATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWLR 308 ++ P Y + ++W Sbjct: 237 ISLVPIDGSSYPSG---------VSVKPLADADAYRDVGMIWDSGRPLPRSARDFI 283 >UniRef50_C6W9R3 Transcriptional regulator, LysR family n=1 Tax=Actinosynnema mirum DSM 43827 RepID=C6W9R3_ACTMD Length = 299 Score = 204 bits (519), Expect = 5e-51, Method: Composition-based stats. Identities = 44/312 (14%), Positives = 91/312 (29%), Gaps = 24/312 (7%) Query: 11 NLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVS 70 + L + + S T+ A+R V SAVS ++ +L LF +S T + Sbjct: 7 HQLAYFLAVAETGSFTRGARRAGVVQSAVSAAVTQLERELGAELFERHYHRVSLTAEGEA 66 Query: 71 MEQNLAEWMQMSNLLLDKPHHQTP-RGLKFELAAESPLMMIMLNALSKQIYQRYPQATIK 129 + + + + + L S + L L + R+P+ + Sbjct: 67 LLPRARDVLTALDAAREAVAGARGELVGTVRLGTISFTGPLDLAGLLRSFAARHPRVEVH 126 Query: 130 LRNWDYDS---LDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRK 186 LR + LD + G +D+ + + + + + + Sbjct: 127 LRQTTSGTATSLDDLRSGALDLALVSTPADGL---------PGVALTEIHREPLVLVCGR 177 Query: 187 DHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMA 245 DHP + + P I + +D+ G R I + +F + + Sbjct: 178 DHPLASAERVGIGQLAGEPFIDFPTGWGNRAVIDHAFASAGVTRAIRTEVTDFALARTLV 237 Query: 246 AQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIV 305 L L+ P + V + ++ E L Sbjct: 238 EH--GLGLSIFPAGAVDGPADGPVARVPI--------RESPEWTIKLARPAPRREGTAAT 287 Query: 306 WLRETIKNLYAS 317 L + + + Sbjct: 288 ALARAVLDAARA 299 >UniRef50_Q081K6 Transcriptional regulator, LysR family n=2 Tax=Alteromonadales RepID=Q081K6_SHEFN Length = 326 Score = 204 bits (519), Expect = 5e-51, Method: Composition-based stats. Identities = 73/320 (22%), Positives = 128/320 (40%), Gaps = 26/320 (8%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 K+I LDLNLL + L E+++T A+K + +TPSAVS ++ +LR +DPLFV L + Sbjct: 23 KAIQQLDLNLLKIFEALYSEQNMTLASKSLFITPSAVSHAIKRLRLVLNDPLFVRQGLQM 82 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQIY 120 PT M L + +L + P F++A L ++ L KQ+ Sbjct: 83 QPTAACQRMAPQLISALNRIRQVLQQCGEFDPLTTEQTFKIAIHEALESQIMPTLIKQVV 142 Query: 121 QRYPQATIKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 + P A I + + + GEVD+ ++ ++ + ++ L SD Sbjct: 143 KLIPHAKIASMSLSRENIARQLANGEVDLAI----------DVARAVNAPLAHKTLLSDP 192 Query: 180 PCVWL-RKDHPALHQT---WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSL 235 CV + R+ H + + H+++ D +LQ+ G R I Sbjct: 193 FCVLIDRRQHAMHLEPSTKLTPTDYANAEHVAVSSRPIGRVMEDILLQQQGVNRHIKYRC 252 Query: 236 PEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWH 295 ++ + + L+L + + L + +P ++ L WH Sbjct: 253 QSYQTAAKIVIGSP-LMLTLPRSIAEQF-IHPDLHVCTMPFELP-------DIDTHLYWH 303 Query: 296 KRNSHNPKIVWLRETIKNLY 315 +P VWLR I+ Sbjct: 304 MNTETDPAFVWLRAQIEMAI 323 >UniRef50_Q1YDL8 Transcriptional regulator, LysR family n=1 Tax=Aurantimonas manganoxydans SI85-9A1 RepID=Q1YDL8_MOBAS Length = 302 Score = 204 bits (519), Expect = 5e-51, Method: Composition-based stats. Identities = 38/317 (11%), Positives = 97/317 (30%), Gaps = 27/317 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++ LL + +E +AA+R+++ A+++ + +L L + ++ TP Sbjct: 2 VETRLLRSFVCVAEELHFGRAARRLHIAQPALTRQIQQLEERLQATLLNRNQRIVTLTPA 61 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQ-TPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + + + + + + + ++ +P+ Sbjct: 62 GRMFLERSYRILADLEQAAKEVRRVEAGQEGRLSVGFIHSSTYGVTPLVLRRFRLAFPRV 121 Query: 127 TIKLRNWD-YDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 ++L + L A+ G++D+G S + L + V L Sbjct: 122 DLELFEMTIQEQLAALRDGQIDVGILRPPISDPS----------LRARPLREERFVVALP 171 Query: 186 KDHPALH-QTWNLDTFLRYPHISICWEQS--DTWALDNVLQELGRERTIAMSLPEFEQSL 242 DH +L I +S + + ++ G + + + Sbjct: 172 HDHRLAATDRLHLRDLSEDGFILFTQRKSPLFYARIIGMCEKAGFVPRVEQYATQIHTMI 231 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 + + + +A P + N + + E V L W + +P Sbjct: 232 GLVSA--GMGVAIVPEVARSLNIPG--------VAYVEIADTPPTVQVCLGWRA-SDTSP 280 Query: 303 KIVWLRETIKNLYASMA 319 + + A +A Sbjct: 281 ILAAFCDH-AETSARLA 296 >UniRef50_B4SNU6 Transcriptional regulator, LysR family n=1 Tax=Stenotrophomonas maltophilia R551-3 RepID=B4SNU6_STRM5 Length = 310 Score = 204 bits (519), Expect = 5e-51, Method: Composition-based stats. Identities = 45/287 (15%), Positives = 88/287 (30%), Gaps = 18/287 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L + Q +S TKAA+ +++ + + + L PLF G+ + Sbjct: 1 MELRHLRYFVMTAQLQSFTKAAEALHIAQPPLGQQIRALEEEIGTPLFHRQGRGIVLSDA 60 Query: 68 MVSMEQNLAEWMQMSNLL-LDKPHHQTPRGLKFELAAESPLMM-IMLNALSKQIYQRYPQ 125 + + + L + AL ++ Q +P Sbjct: 61 GRVFWAAAVDILARVDHAKEQALSAARGEVGTLTLGLTESASYNDAVTALLRRFRQAHPA 120 Query: 126 ATIKLRN-WDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 ++L + + GE+D S P + + L ++ L Sbjct: 121 VQLQLVEDGSESLIRRLDDGELDAVIVRPP---------YSHPGELVIQQLSAEPLVAVL 171 Query: 185 RKDHPALHQT-WNLDTFLRYPHISICW--EQSDTWALDNVLQELGRERTIAMSLPEFEQS 241 +HP + L I + + + G TI P+ + Sbjct: 172 PAEHPLAGRAGIALTELRDERFILFSRKSGYGLSADVVAACRSQGFTPTIQQEAPQVASA 231 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEV 288 + +AA L +A P Q ++ L VAL L + + Sbjct: 232 INLAAA--GLGIAIVPASMQTLHR-PGLAFVALELGMPITALQLAMR 275 >UniRef50_B0TPA4 Transcriptional regulator, LysR family n=2 Tax=Shewanella RepID=B0TPA4_SHEHH Length = 301 Score = 204 bits (519), Expect = 5e-51, Method: Composition-based stats. Identities = 59/317 (18%), Positives = 125/317 (39%), Gaps = 25/317 (7%) Query: 6 TTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPT 65 D+NLL + + S T AA+ +++T +VS ++ + +A + LFV + + PT Sbjct: 5 KQFDVNLLRVFLAVCRTGSYTLAAEELDLTQPSVSNAINRFKAVVGEELFVRAGRNIKPT 64 Query: 66 PLMVSMEQNLAEWMQMSNLLLDKPHHQTP--RGLKFELAAESPLMMIMLNALSKQIYQRY 123 + + + L + ++ P +F + A + ML ++ + Sbjct: 65 AMANYLFEQLNDSFCNIEQTINGLEGFDPNTSERQFVVLANDVIAH-MLQRRLDELVKDL 123 Query: 124 PQATIKLRN---WDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 P I R +D + L+ +T + D+ + ++L + Sbjct: 124 P-IEIIFREPPDFDSEILELLTLEQADLVIDIGLPE----------DNRFERKLLIQEAA 172 Query: 181 CVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQ 240 K+HP + ++ + + F H+ + + + A+D + +E+ R + S Sbjct: 173 VCVASKEHPRIQESISWEQFFAERHVFVKLRRFNRTAVDILSEEVLPNRKVYSSKSSMLS 232 Query: 241 SLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 + D + +A Y + ++ L L+ LP + L+W K+++ Sbjct: 233 LFSAVSTSDAIGVA-PRNYSNDFEKVFNLQLLPLPF-------NTKPLDIELVWKKKHNR 284 Query: 301 NPKIVWLRETIKNLYAS 317 NP +WLRE I +L Sbjct: 285 NPAHIWLREQITSLVDE 301 >UniRef50_Q67PU0 LysR family transcriptional regulator n=1 Tax=Symbiobacterium thermophilum RepID=Q67PU0_SYMTH Length = 299 Score = 204 bits (519), Expect = 5e-51, Method: Composition-based stats. Identities = 40/314 (12%), Positives = 93/314 (29%), Gaps = 21/314 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 + L L+ +++ +A + ++ AV++ +A L A PL S + TP Sbjct: 1 MLLQHLITFCRVVETGGFARAGALVGLSQPAVTRQVAALEAELGTPLLDRSGRQIHLTPA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQT-PRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + + N L ++ P + + A + + + +L + + +P Sbjct: 61 GRLVYERARRIITAVNTLKEEVADLAHPERGRIAIGAVTTVGLRLLPPILAAFKREHPGI 120 Query: 127 TIKL-RNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + + + +++ + GE+++ + L D + Sbjct: 121 RVHVKADRTQETIQRLLEGEIELAILPTPVT----------HPRLRSVPLVEDPVVLVCA 170 Query: 186 KDHP-ALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 L L IS +D +L++ G + M E M Sbjct: 171 PGRRSELPDPLPLAKLGEIDLISFQAPSRFRTFVDAMLEQAGVYPNVTMEFDSHEAVTLM 230 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLL-WHKRNSHNPK 303 A P + + ++ +L H +P Sbjct: 231 VEA--GFGCALVPASAVERELALGTVVR-----VEVEGMPRMARTTSLAFRHPNPGWSPA 283 Query: 304 IVWLRETIKNLYAS 317 L + I + + Sbjct: 284 TERLFQMIVDFFRQ 297 >UniRef50_B1K9P6 Transcriptional regulator, LysR family n=22 Tax=Proteobacteria RepID=B1K9P6_BURCC Length = 306 Score = 204 bits (519), Expect = 5e-51, Method: Composition-based stats. Identities = 44/320 (13%), Positives = 92/320 (28%), Gaps = 28/320 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +DL + + S +AA+R+++ +S ++ KL L G TP Sbjct: 2 IDLRQFRQFIAVAETLSFRRAAERLHMAQPPLSTAIRKLEDELGVALLERDNRGSRLTPA 61 Query: 68 MVSMEQNLAEWMQMSN-LLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + ++ + + G L + +L + + +R+P Sbjct: 62 GEAFLLEARRALEQAERAVAVARRAGAGLGGTLRLRFVDSTVNALLPLILRAFQERHPNV 121 Query: 127 TIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 +L D + A+ + D G + E L D L Sbjct: 122 DFQLEEGTTADQVLALRQDRTDAGLVVLPVADAG---------DVHVEPLLRDRMVAALP 172 Query: 186 KDHPALHQT----WNLDTFLRYPHISI--CWEQSDTWALDNVLQELGRERTIAMSLPEFE 239 H H+ L P + + + G + + + Sbjct: 173 DGHRLAHRRRIALAELAELADEPWVMFAAHHGPGMHALIVTACAQAGVAPRVVQQPRQMQ 232 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 + + A + +A PR + + L + L L + + Sbjct: 233 TTAGLVAG--GIGVALMPRLFVPMHPQ-GITFCEL-----KDAGSPLAYELALAYR---T 281 Query: 300 HNPKIVWLRETIKNLYASMA 319 +P + LRE+ +N + Sbjct: 282 PSPLVDALRESARNAVRELG 301 >UniRef50_D0D0K4 Transcriptional regulator n=1 Tax=Citreicella sp. SE45 RepID=D0D0K4_9RHOB Length = 300 Score = 204 bits (519), Expect = 5e-51, Method: Composition-based stats. Identities = 46/305 (15%), Positives = 98/305 (32%), Gaps = 19/305 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 L L + + +V+ AA+ + ++ SAV++++ +L A LF P GL T Sbjct: 3 FTLRQLRYFLAVAESGTVSGAAQALAISQSAVTEAIRELEADLGVQLFERHPRGLDITQK 62 Query: 68 MVSMEQNLAEWMQMSNLLLDKPH-HQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 ++ + + K + S + +L+ + + + P Sbjct: 63 GHQFLRHATGILGSVSDARLSLSKDPDRLRGKLHVGVTSLVAGYVLSDILSRFRRANPGV 122 Query: 127 TIKLRNWDYDSLDAIT-RGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + + L+ + GE+D +A+ E++ + +WL Sbjct: 123 EVTALEDSGEYLEHLLIGGELDAAVM--------VTTNMRDRMALQTEIIDTSPYQLWLP 174 Query: 186 KDHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 H +T +++ + P I + + A +L G +A E + Sbjct: 175 NGHELSTRTSVSIEDLVDEPIIMLRVD-EIEEATRRLLSAFGARPRVAFRTRSVEAVRSL 233 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 A +A P L +V+ + V ++W K +P Sbjct: 234 VAT--GAGIAILPELVYRRWSLEGDRIVSRDV-----SGSLPVVQVGVVWRKGAPLSPAT 286 Query: 305 VWLRE 309 Sbjct: 287 REFIR 291 >UniRef50_P0ACR6 Uncharacterized HTH-type transcriptional regulator yeiE n=127 Tax=Proteobacteria RepID=YEIE_ECO57 Length = 293 Score = 204 bits (519), Expect = 5e-51, Method: Composition-based stats. Identities = 55/304 (18%), Positives = 95/304 (31%), Gaps = 22/304 (7%) Query: 7 TLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTP 66 + L L +++ S T+A+ + ++ SAVS +L L LF L Sbjct: 2 HITLRQLEVFAEVLKSGSTTQASVMLALSQSAVSAALTDLEGQLGVQLFDRVGKRLVVNE 61 Query: 67 LMVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + + ++ + A S + +L A+ + YPQ Sbjct: 62 HGRLLYPRA---LALLEQAVEIEQLFREDNGAIRIYASSTIGNYILPAVIARYRHDYPQL 118 Query: 127 TIKL-RNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 I+L D + A+ VDIGF H I E D V+ Sbjct: 119 PIELSVGNSQDVMQAVLDFRVDIGFIEGPCHST----------EIISEPWLEDELVVFAA 168 Query: 186 KDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMA 245 P L+ P I +D +L + +AM L E Sbjct: 169 PTSPLARGPVTLEQLAAAPWILRERGSGTREIVDYLLLSHLPKFEMAMELGNSEAIKHAV 228 Query: 246 AQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIV 305 + + R + Q L VA+PLP +L + H++ + + Sbjct: 229 RHGLGIS-CLSRRVIEDQLQAGTLSEVAVPLP-------RLMRTLWRIHHRQKHLSNALR 280 Query: 306 WLRE 309 + Sbjct: 281 RFLD 284 >UniRef50_B2JTF3 Transcriptional regulator, LysR family n=1 Tax=Burkholderia phymatum STM815 RepID=B2JTF3_BURP8 Length = 309 Score = 203 bits (518), Expect = 6e-51, Method: Composition-based stats. Identities = 59/318 (18%), Positives = 106/318 (33%), Gaps = 22/318 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L +E +AA R+++T AVS+ +A L PLF + T Sbjct: 1 MELRHLRYFIAAAEEEHFGRAAVRLHITRPAVSQIIADLEGELGTPLFERLAHTVKLTAA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQ-TPRGLKFELAAES-PLMMIMLNALSKQIYQRYPQ 125 ++ L M N + + S LM + A K YP+ Sbjct: 61 GRTLLPQLVRVMDDLNEAIILTKRVGQGMTGTLRIGYGSLTLMHSIFKAAVKLFRATYPE 120 Query: 126 ATIKLRNWDYDS-LDAITRGEVDIGFSGRESHPRSRELLSSLPLA-----IDYEVLFSDV 179 + L A+ G++D GF P + + + + +D + + Sbjct: 121 INLSLVELSTSLQPKALAEGKIDAGFMHLGPSPHPGKRRTEINMEREGIVLDSICIQTGS 180 Query: 180 PCVWLRKDHPALHQ-TWNLDTFLRYPHISICWEQS--DTWALDNVLQELGRERTIAMSLP 236 V + DH + + L+ P + S L ++ Q G E I + Sbjct: 181 VGVAVPNDHRFARRKSLTLEDLADEPLVVDPKSSSSLSYGQLYSLCQAAGFEPNIVQEVS 240 Query: 237 EFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHK 296 L + + + LA + QY + L +PL L Sbjct: 241 TIASQLNLISVGMGIGLAVMGKNFQYPSDLTVIPLANLNYSTRFIFGWV----------- 289 Query: 297 RNSHNPKIVWLRETIKNL 314 R ++P + + E +K+L Sbjct: 290 RRQNDPILENMIEIVKSL 307 >UniRef50_B5ZKC3 Transcriptional regulator, LysR family n=7 Tax=Proteobacteria RepID=B5ZKC3_GLUDA Length = 323 Score = 203 bits (518), Expect = 6e-51, Method: Composition-based stats. Identities = 64/298 (21%), Positives = 111/298 (37%), Gaps = 22/298 (7%) Query: 22 ERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSMEQNLAEWMQM 81 E SV +AA R+N++ A+S+ L +R DP+FV + L PTP +M + E + Sbjct: 29 EGSVARAAARMNLSTPAMSRILGHIRDLTGDPIFVRAGRSLVPTPRAEAMRLPVRELVAR 88 Query: 82 SNLLLDKPH--HQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQATIKLRNWDYDSLD 139 + +L F L A + L+ + P+ ++ +S+D Sbjct: 89 ARSILGNAGDLDLDRLDRTFTLRATDSFIGSFGPRLAGHLTTLAPKVRLRFVPQRDESVD 148 Query: 140 AITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPALHQTWNLDT 199 + G+VD+ +S I + + SD +R HP Sbjct: 149 DLREGQVDLDIGA----------ISHTGPEIMTQTILSDRFVGVVRPGHPLSSGRITSAR 198 Query: 200 FLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQPDNLLLATAPRY 259 F R HIS +D L L R + +P F +L A Q + + + Sbjct: 199 FSRQRHISASRRGRMHGPVDQALGSLNLSRNVVTIVPTFSDALLFARQSELVAVVP---- 254 Query: 260 CQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWLRETIKNLYAS 317 ++ + +V+ PLP + + WH R + WLR ++ + A Sbjct: 255 -DRLTEVARQDMVSFPLPVETGLLI-----ISQAWHPRFQADATHQWLRACVREICAE 306 >UniRef50_B5CY17 Putative uncharacterized protein n=2 Tax=Bacteroides RepID=B5CY17_9BACE Length = 297 Score = 203 bits (518), Expect = 6e-51, Method: Composition-based stats. Identities = 34/311 (10%), Positives = 99/311 (31%), Gaps = 23/311 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L + + ++ ++AA+ ++++ S +S+ + +L D LF + PT Sbjct: 1 MELRQLKYFKEACELQNFSEAARVLHISQSTLSQQIKQLEDELDVLLFDRIGKRIVPTEA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTP-RGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 ++ ++ + + + +++ A + YP+ Sbjct: 61 GLAFLPYAVRAIRDAENGKQIIRDLKGIETGVLHVGVTYSMSPLLI-AALGLFSKTYPKI 119 Query: 127 TIKLR-NWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + + + LD + ++D S + + ++ LFS + + Sbjct: 120 KVNVSFGTSEELLDRLEANQLDFVLSFKPEG---------VSEHLETMPLFSSMLRFIVH 170 Query: 186 KDHPALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 HP + L P I + +D++ ++ E T+ + + + + Sbjct: 171 CSHPLAELSSITLKRLSETPLILPGKGFATRKRVDDLCRKHQLELTVGVEMNDVHTIIHT 230 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 + + + + KL L W + + Sbjct: 231 LRE--GYWGTILTQAAVRGEENL--------VQIPILCADKLTSQGFLFWAQGDYRKKSA 280 Query: 305 VWLRETIKNLY 315 + + ++ + Sbjct: 281 LAFADFLRKVA 291 >UniRef50_A6F002 Transcriptional regulator, LysR family protein n=1 Tax=Marinobacter algicola DG893 RepID=A6F002_9ALTE Length = 299 Score = 203 bits (518), Expect = 6e-51, Method: Composition-based stats. Identities = 39/315 (12%), Positives = 100/315 (31%), Gaps = 24/315 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L+LL + ++RS ++AA+ I+++ AVS+++ +L L + T Sbjct: 1 MNLHLLRTFASVAEQRSFSRAAEAIHISQPAVSRAVRELEEQLGMALLERRGGQVRLTEA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + Q+ + + + + A + L + + +++P Sbjct: 61 GAELYQHARAIFALEQSAMADLRGRQGLERGSLTIGASRTIGTYFLPPVIAEFLRQFPAI 120 Query: 127 TIKLRNWDYDSLD-AITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 +++ + + + + + E+DI F E + D + Sbjct: 121 DVRIISENTELIQRRLLAYELDIAFIEGSVEDSRVEEVF----------WHEDELVILAH 170 Query: 186 KDHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 DHP L ++ + +L++ G + + + + Sbjct: 171 SDHPLLNRKSLKASDLDAERWVLREQGSGTRSVTLALLKQAGVKVDRTIEVGGNGALVQS 230 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQ-LPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 A L LA + + ++ P F + P + + +P Sbjct: 231 VAA--GLGLAMVSSVAAREHLSVGKVNVLNFPDRF--------KRPLHRIRLRNKPESPA 280 Query: 304 IVWLRETIKNLYASM 318 L + ++ Sbjct: 281 AQALVAVADRVASTF 295 >UniRef50_B9KUK0 Transcriptional regulator n=2 Tax=Rhodobacteraceae RepID=B9KUK0_RHOSK Length = 300 Score = 203 bits (518), Expect = 7e-51, Method: Composition-based stats. Identities = 44/292 (15%), Positives = 92/292 (31%), Gaps = 18/292 (6%) Query: 1 MKKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPL 60 M + LD L ++ S KAA+ +N++ A+++ + + LF S Sbjct: 1 MSINFELLD---LRTFLAIIDLGSFRKAAEALNISQPALTRRMQAFEYKLGNQLFERSTR 57 Query: 61 GLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQ-TPRGLKFELAAESPLMMIMLNALSKQI 119 +S T + +E + + R +A + L ++ + Sbjct: 58 NVSLTNVGREIEPMARRTLAEIDEQFGSLSDAGATRSGFISIACIPTSTLSFLPSVIGRF 117 Query: 120 YQRYPQATIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSD 178 +P+A ++ + LD++ G D G + + LF D Sbjct: 118 QTDFPRARFRILDNSSAQVLDSVFDGTADFGLTFT----------GQSDSQFKFTALFED 167 Query: 179 VPCVWLRKDHPALHQ-TWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPE 237 P + P I + + +D L + G + A + Sbjct: 168 EFVALCAPGDPIAQKARIAWSELNTLPLIGVNRSSGNRTLMDTRLSKDGIKLNWAHEVNH 227 Query: 238 FEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVP 289 ++ + Q + ++ PR + L ++ L P + LE Sbjct: 228 VIAAVGLVRQ--AVGVSVVPRMAYDPRLMGDLRIIPLVNPVVSRRLGILERS 277 >UniRef50_B9K150 Transcriptional regulator LysR family n=1 Tax=Agrobacterium vitis S4 RepID=B9K150_AGRVS Length = 318 Score = 203 bits (518), Expect = 7e-51, Method: Composition-based stats. Identities = 59/318 (18%), Positives = 108/318 (33%), Gaps = 20/318 (6%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 LDLNLL+ L L++ R+V++AA+ + +T SA+S +L +LR +FDDPL + + Sbjct: 1 MRFKNLDLNLLVALDTLIRVRNVSRAAEEMFITQSAMSNALGRLRDYFDDPLLIQVGRSM 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTP--RGLKFELAAESPLMMIMLNALSKQIY 120 +PL S+E L + + + P L + ++ +Q+ Sbjct: 61 ELSPLAASLELPLRDIIVRIEAAVVSTPSFIPHESTRSINLIVSDYTLNTIMPPFLRQVT 120 Query: 121 QRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 P I + + RGE D+ + + E D Sbjct: 121 ALAPGVQIHFQPQQNYPHLLLERGEADLLVAPSD----------FCSTNHPSEPFLEDQI 170 Query: 181 CVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQ 240 C + + P FL H+ + LG + + S F Sbjct: 171 CCVVDVNGPLAEGPMTEKDFLEAGHVVMQPPNGGETFAQRACDRLGLKIKVEASTFSFSS 230 Query: 241 SLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 F+ + + + L + ++ + L WH + Sbjct: 231 LPFLIRGSKRIAM-VQRSLAECMLNLGGIRIMD-------PPFPLPPLLQCLQWHSYRTR 282 Query: 301 NPKIVWLRETIKNLYASM 318 +P +VW R + A + Sbjct: 283 DPALVWFRSQMHEAAARV 300 >UniRef50_Q46S95 Transcriptional regulator, LysR family n=2 Tax=Burkholderiaceae RepID=Q46S95_RALEJ Length = 309 Score = 203 bits (517), Expect = 7e-51, Method: Composition-based stats. Identities = 47/314 (14%), Positives = 100/314 (31%), Gaps = 25/314 (7%) Query: 9 DLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLM 68 DLN L C + +E +AA R+ +T S +S+ + L LF + + T Sbjct: 4 DLNQLRCFIAVGEELHFGRAATRLFMTQSPLSRQIRMLEESLGVRLFDRNSRVVRLTAAG 63 Query: 69 VSMEQNLAEWMQMSNLLLDKPHHQT-PRGLKFELAAESPLMMIMLNALSKQIYQRYPQAT 127 ++ + + ++ +D K + + ++ L + Q P+ Sbjct: 64 SALLDDARRLLALAGHAVDVARRIDKGVSGKVRVGFTAVAGYELVPNLIARAMQELPEIE 123 Query: 128 IKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRK 186 + L ++A+ G +D+GF L + + + S+ + + Sbjct: 124 VTLHEMVTVAQIEALQAGTIDLGFLRP---------LPDVDPELQWRPAVSEPLLLAMHA 174 Query: 187 DHPA-LHQTWNLDTFLRYPHISICWEQS--DTWALDNVLQELGRERTIAMSLPEFEQSLF 243 H + + I + + +VL GR + + + L Sbjct: 175 THALAARERIAAEDLAGQTFIQYSATEGKYFHDLIGSVLAGAGRPPRVVQQMSQTHSVLA 234 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 + L LA P ++ L + + + L+W + + NP Sbjct: 235 LVRA--GLGLALVPASARH--------LHFPGVVLRPIWRDDVRAELRLVW-RDANRNPA 283 Query: 304 IVWLRETIKNLYAS 317 + AS Sbjct: 284 CRVFADFAAMHLAS 297 >UniRef50_B4SKP4 Transcriptional regulator, LysR family n=24 Tax=Bacteria RepID=B4SKP4_STRM5 Length = 320 Score = 203 bits (517), Expect = 8e-51, Method: Composition-based stats. Identities = 46/310 (14%), Positives = 92/310 (29%), Gaps = 19/310 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L L L + +AA V+ +S + KL PL +P + TP Sbjct: 1 MNLRDLKYLVALADHKHFGRAAASCFVSQPTLSTQIRKLEEELGLPLVERAPRKVMLTPA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHH-QTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + L + + P L L +L + +I +R+P+ Sbjct: 61 GQEAAARARVIVSEVEQLKEAARRSRDPEAGTVRLGIFPTLGPYLLPHVIPRIRERFPEL 120 Query: 127 TIKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + L D LD + G++D + + E LF + + + Sbjct: 121 ELLLVEEKSDVLLDRLREGKLDAALLALPV----------IDDQLHAEFLFEEPFLLAVS 170 Query: 186 KDHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 HP + ++ + + V + G E M Sbjct: 171 GRHPLARREHLDVQELATQKLLLLEDGHCLRDQALEVCRLFGANEKSEFRATSLETLRQM 230 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 A + + P + L + + + ++W + ++ N + Sbjct: 231 VAAD--VGITLLPSLSVQPPVPRSSNIRLLDF----TGEGRPSRRIAMIWRRSSAMNDFL 284 Query: 305 VWLRETIKNL 314 L + K L Sbjct: 285 TELADQFKRL 294 >UniRef50_A1WHL2 Transcriptional regulator, LysR family n=10 Tax=Proteobacteria RepID=A1WHL2_VEREI Length = 305 Score = 203 bits (517), Expect = 8e-51, Method: Composition-based stats. Identities = 37/311 (11%), Positives = 94/311 (30%), Gaps = 22/311 (7%) Query: 7 TLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTP 66 DL+ + + S AA+ ++++ A+S+ + KL LF + + + Sbjct: 2 NFDLSDMRAFVAVADLGSFRAAAQTLHISQPALSRRVEKLEQAMGFRLFERTTRKVELSA 61 Query: 67 LMVSMEQNLAEWMQMSNLLLDKPHHQ-TPRGLKFELAAESPLMMIMLNALSKQIYQRYPQ 125 + S + L + +A + +L + +++P+ Sbjct: 62 IGRSFVPKARHVLSELENALLGMTDMSDRLRGQVTVACVPSSVPHLLAGAVEAFQRKFPR 121 Query: 126 ATIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 ++L + + L A+ R E D G S + ++++ L + + Sbjct: 122 IRVRLIDETATEILLAVVRSEADFGVSY----------WGAQEPDLEFQGLVQEPFVLAC 171 Query: 185 RKDHPALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 HP + ++ +++ + +D L + L Sbjct: 172 LPGHPLARKRRVKWAELAQHDCVTLPPGTGNRMLIDQALSTVAYPPRWTCEARHVPALLS 231 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 + + PR+ Q L V L + ++ ++ + P Sbjct: 232 LIEAGVGVGA--VPRFAIRGGQGATLASVRL-------VEPEVTRTIGVIKRRARPLMPA 282 Query: 304 IVWLRETIKNL 314 + + Sbjct: 283 AQAFHDLLVAA 293 >UniRef50_A5VBV3 Transcriptional regulator, LysR family n=1 Tax=Sphingomonas wittichii RW1 RepID=A5VBV3_SPHWW Length = 319 Score = 203 bits (517), Expect = 8e-51, Method: Composition-based stats. Identities = 71/319 (22%), Positives = 124/319 (38%), Gaps = 13/319 (4%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 ++ DLNLL L +L+ ER+VT+AA+R+ VT A S +L +LR FDD L L Sbjct: 1 MQLSHFDLNLLRALDILLTERNVTRAAERLCVTQQAASSALQRLRHHFDDELLTRVGRHL 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKF--ELAAESPLMMIMLNALSKQIY 120 TPL S+ + E + LD H P ++ +A + ++L L + + Sbjct: 61 ELTPLARSLIMPVREALLTVQAALDARPHFDPATARYKCRIAMSDYCLHVILPHLLRYLT 120 Query: 121 QRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 P + S D + GE+D + H I LF D Sbjct: 121 ITAPNMQCAVETLGPASFDRLEMGELDFCLTA---HDMRLYGTHRPSRHIRTMPLFRDDF 177 Query: 181 CVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQ 240 H + +L T+ R H ++ + + +++ E IA+ +P F Sbjct: 178 VCVADPAHVDIADGMSLRTYRRARHNTVDFGEDLKTIVEDAWASSSTEFDIAVLVPNFAA 237 Query: 241 SLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 +FM + + R L + P+ + Q+ L WH+R+ Sbjct: 238 QIFMLPGTPLVA-TSQRRLANTLAPRLGLAVAECPMKLPQLQEI-------LFWHERSEQ 289 Query: 301 NPKIVWLRETIKNLYASMA 319 +P +++R+ + + Sbjct: 290 DPARIFVRKAFGLMVDQLG 308 >UniRef50_Q2RZH0 Transcriptional regulator, LysR family n=1 Tax=Salinibacter ruber DSM 13855 RepID=Q2RZH0_SALRD Length = 300 Score = 203 bits (517), Expect = 8e-51, Method: Composition-based stats. Identities = 47/311 (15%), Positives = 94/311 (30%), Gaps = 26/311 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L L E +AA + V S +S+ + LF + G+ T Sbjct: 1 MELRHLRYFTALADELHFGRAADAVFVAQSTLSQQIKAFEEEIGVALFDRASGGVELTEA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQ-TPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + ++ + + + M L A+ K + P Sbjct: 61 GHTFLPYAKRVLREARRAESVARAARDGLAGLLTITYAASAMRSGLPAIIKTFRSKRPHG 120 Query: 127 TIKLRN-WDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + L + +DA+ E D+GF + R + + LF+ V L Sbjct: 121 ELDLVEQTTREQVDALRGKETDVGFLFLPINER----------GLRVQPLFTAPMVVVLP 170 Query: 186 KDHPALHQT-WNLDTFLRYPHISICWEQS--DTWALDNVLQELGRERTIAMSLPEFEQSL 242 H +T L PH+ + A E G I + E L Sbjct: 171 TGHRLADRTSVPLRELEGEPHVIWARSGAPRIHDAYVRACHEAGFTPQIPQEIERGESFL 230 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 + + +A + + + + + + + + L + + N +P Sbjct: 231 GLVEAGLGVSIA----------HASNVQIQRPGVGYAKIVEPTVPLTLGLAYRRDND-SP 279 Query: 303 KIVWLRETIKN 313 + ET+ + Sbjct: 280 LLDRFLETVAD 290 >UniRef50_B9X9V4 Transcriptional regulator, LysR family n=1 Tax=bacterium Ellin514 RepID=B9X9V4_9BACT Length = 296 Score = 203 bits (517), Expect = 8e-51, Method: Composition-based stats. Identities = 47/305 (15%), Positives = 105/305 (34%), Gaps = 24/305 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 + + C + +E ++AAKR++++ +SK + +L LF+ + + T Sbjct: 1 MQFRQIECFLAVAEELHFSRAAKRLHLSQPPLSKHIRQLEQELGVQLFIRNRRSVVQTEA 60 Query: 68 MVSMEQNLAEWMQMSNLL-LDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 ++ + + L Q + + ++ S L + L + +R+P Sbjct: 61 GRIYQEKVRNVLYQLEEAKLAAQRAQAGQTGELKIGFLSALFYDFIPPLLMRFRRRFPDV 120 Query: 127 TIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + L +A++ G+VD+ F G I +L D Sbjct: 121 QVTLLEMVAAKQFEAVSDGKVDVAFPGLPPDKPGL--------EISSRILRKDKWYACFH 172 Query: 186 KDHPALHQT-WNLDTFLRYPHISICW--EQSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 +HP Q L+ R + I + AL + +++ +A + + L Sbjct: 173 SEHPLAQQEKVWLEEVRRESFVFIQRAVSPALDDALLEMFRQVNYTPRVAQTASRAQSLL 232 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 + A + ++ P L F + K +++W+ N+ +P Sbjct: 233 SLIAA--GVGISIFPGAVSALPSAG--------LVFRPLKDKLAPYEHSIIWNGSNT-SP 281 Query: 303 KIVWL 307 + Sbjct: 282 VLAEF 286 >UniRef50_A6X7A0 Transcriptional regulator, LysR family n=1 Tax=Ochrobactrum anthropi ATCC 49188 RepID=A6X7A0_OCHA4 Length = 308 Score = 203 bits (517), Expect = 8e-51, Method: Composition-based stats. Identities = 43/312 (13%), Positives = 105/312 (33%), Gaps = 22/312 (7%) Query: 10 LNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMV 69 L + C Q +++ + ++AA+R+ T + +S ++ L D LF + +S T Sbjct: 5 LRQIECFQAVVELGNFSRAAERVRTTQANLSHTIRDLETVLDARLFDRTTRRVSLTDAGR 64 Query: 70 SMEQNLAEWMQMSNLLLDKPHHQ-TPRGLKFELAAESPLMMIMLNALSKQIYQRYPQATI 128 + + + + + R + +AA L +L L +++ +P I Sbjct: 65 AFAEGALAGLAEIDRAAEVVRDLGKLRRGQVSIAAPPLLCTTVLPHLVRRVADEHPNLVI 124 Query: 129 KLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKD 187 K+ + + + + + G D+G ++ ++ D +++ Sbjct: 125 KIEDVGPEIVIEQVRNGRCDLGVGTFSGEDS----------DVESQMALRDQLMIFVSPH 174 Query: 188 HPALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAA 246 H + P I++ + + + ++ M + + L + Sbjct: 175 HDFAGHEQVRWAELDDQPIITLTQKSNIRLLTEIGFEQAKLALRPHMEVNQIHSVLSLVE 234 Query: 247 QPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVW 306 N +A P Y + + L + L+ + + V Sbjct: 235 --VNAGIAVLPAYAFTALRGRGIVARPL-------TDPAIVREVRLITPRDREQSAATVA 285 Query: 307 LRETIKNLYASM 318 +R ++NL M Sbjct: 286 VRSILRNLLRQM 297 >UniRef50_C6D9U9 Transcriptional regulator, LysR family n=1 Tax=Pectobacterium carotovorum subsp. carotovorum PC1 RepID=C6D9U9_PECCP Length = 294 Score = 203 bits (517), Expect = 8e-51, Method: Composition-based stats. Identities = 43/315 (13%), Positives = 104/315 (33%), Gaps = 29/315 (9%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++ + + +E T+AA R+N+ +S+ + L A LF + + T Sbjct: 1 MEFRHIRYFIAVAEELHFTRAAVRLNIGQPPLSQQIQSLEAELGVLLFERTRRSVRLTEA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQ-TPRGLKFELAAESP---LMMIMLNALSKQIYQRY 123 E ++ S + + + +++ S + + + +Y Sbjct: 61 GQHFLIRAREILESSEGVASELQRISRGEAGELKISFTSTGLLVEELRTP--LRTFRAKY 118 Query: 124 PQATIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCV 182 P+ + L+ + A+ GE+DIG P + + +D C+ Sbjct: 119 PEVRLTLKEMFTHLQFAALLAGELDIGCVRFNG--------PRAPDGLTLRWIRNDRLCL 170 Query: 183 WLRKDHPALHQT-WNLDTFLRYPHISIC--WEQSDTWALDNVLQELGRERTIAMSLPEFE 239 L DHP +T + P I S + + ++ G + E Sbjct: 171 VLPDDHPLAGRTDVGIVEVRDEPFIGYPAKAGASVSDYVTMCCEQAGFIPNVTQEAREAM 230 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 + + A + +A P+ + F ++ L+ + + Sbjct: 231 TQIGLVAA--GMGVAILPQPMDQLQPKG--------VCFIPLSDAGAQLRMALVTRE-SD 279 Query: 300 HNPKIVWLRETIKNL 314 ++P++ + ++ + Sbjct: 280 NSPRVRNFVDLVRQM 294 >UniRef50_A6DK62 Hydrogen peroxide-inducible genes activator n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DK62_9BACT Length = 293 Score = 203 bits (517), Expect = 8e-51, Method: Composition-based stats. Identities = 45/315 (14%), Positives = 96/315 (30%), Gaps = 30/315 (9%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 + L +L +E+ +A+ + V+ A+S + K+ A LF S + +P Sbjct: 1 MTFKDLEYFAILAKEKHFGQASVQAGVSQPALSIQIKKMEAELGVCLFERSNRQVVLSPE 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQ-TPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + + ++ P + L A L + + +++Q YP+ Sbjct: 61 GEVLLERAQKILRQVEDFQTCARQFKDPYQGQLILGAFPTLAPYLFPQIIDELHQSYPEM 120 Query: 127 TIKL-RNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + L + G+VD F + +D E +FS+ Sbjct: 121 KFFIKEEKTETLLKMLKEGKVDAAFIALPHEDST----------LDSEFIFSEEFLFATP 170 Query: 186 KDHPA-LHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 ++P +L + + + + E M Sbjct: 171 ANYPEDFPNELSLQSLKGRELMLLDEGHCFRDQALELCSVNQARENFDFRASSLETLRHM 230 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 A L + P+ Q + + + + + L W K +PK Sbjct: 231 VAA--GLGVTLIPKCAQDESAK---------IKYMKFSDPSPKREIALFWRKT---SPKA 276 Query: 305 VWLRET---IKNLYA 316 RE +++L+ Sbjct: 277 EIFREIADDLRDLFK 291 >UniRef50_B7VH72 Transcriptional regulator n=4 Tax=Vibrionales RepID=B7VH72_VIBSL Length = 311 Score = 203 bits (517), Expect = 8e-51, Method: Composition-based stats. Identities = 59/326 (18%), Positives = 121/326 (37%), Gaps = 32/326 (9%) Query: 1 MKKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPL 60 M I +L L +M++ S++KAA +++ S +S +LA+L+ LFV Sbjct: 1 MSNEIPNFNL--LAVFSAVMEQGSLSKAADQLSTNQSTISTALARLKKEIGQELFVRKGR 58 Query: 61 GLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTP--RGLKFELAAESPLMMIMLNALSKQ 118 G++PT S+ + + + N + + KF +++ L I+LN+ + Sbjct: 59 GVTPTSYAQSLYEQIKTPIHELNDVFQSMANFDEQSSERKFVISSPEHLQWILLNSFAAL 118 Query: 119 IYQRYPQATIKLR-----NWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYE 173 P + L + D + + E D S I E Sbjct: 119 -----PNQNLSLEVFDQPDSDERIYEDLLTQEFDAMIDIVVPEHPS----------IVSE 163 Query: 174 VLFSDVPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAM 233 L+ + R+DHP + + F+ H + + +L++ +R I Sbjct: 164 TLYEGEFVIVCREDHPRIQGEISEAQFMNEKHAVLDRTRRKVRSLNHYTSLDLSKRKIVF 223 Query: 234 SLPEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLL 293 ++ + +Q D + + + + L L P + + L+ Sbjct: 224 HGRSLFSNILLCSQSDYITVVPL-SMAVQFQERLGLQLFKPPFEY-------QPISHYLI 275 Query: 294 WHKRNSHNPKIVWLRETIKNLYASMA 319 W K+ +++P W RE + + +M+ Sbjct: 276 WLKKQNNDPAHKWFREQVISTSDAMS 301 >UniRef50_A5L763 Transcriptional regulator n=1 Tax=Vibrionales bacterium SWAT-3 RepID=A5L763_9GAMM Length = 301 Score = 203 bits (517), Expect = 9e-51, Method: Composition-based stats. Identities = 58/317 (18%), Positives = 127/317 (40%), Gaps = 21/317 (6%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 + +LNL+ + +E ++T AA+R+N++ ++S L +LR + D LFV L P Sbjct: 1 MKRFNLNLIYYFIAIYEEGNLTYAAERLNISQPSLSAHLKQLRDEYRDLLFVRKSYTLEP 60 Query: 65 TPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQIYQR 122 TP+ + + ++ + L + H P+ F +AA S ++L + +I + Sbjct: 61 TPVANDLYPIFKQAHKLVSHSLPETHDFEPKECSYTFRIAAMSISSSVILPQILDRIQEE 120 Query: 123 YPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCV 182 P+ I++ N D I ++D+ L++ + + ++ D C+ Sbjct: 121 APECVIEVVNIKEDMATDIREKKIDLVVD-----------LTNAHPTLLSQEIWGDELCM 169 Query: 183 WLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 ++H +++ L+ +L H+ + + L + +R +A L Sbjct: 170 VCSQNHSQINEQVTLEQYLSAKHVMLTHDNYRVNQLTEFHSPIFADRKVARKLNSIADFS 229 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 D + Y ++ L+ LP + + ++ WH + + Sbjct: 230 DTIYNSDWIA-TFPKGVANAYFDKDKIKLLELPFEYIKP-------SLSVYWHSNRNDDI 281 Query: 303 KIVWLRETIKNLYASMA 319 WLRE + +++ Sbjct: 282 VNQWLRELFTSEVLTLS 298 >UniRef50_B2JUD8 Transcriptional regulator, LysR family n=12 Tax=Burkholderia RepID=B2JUD8_BURP8 Length = 298 Score = 203 bits (517), Expect = 9e-51, Method: Composition-based stats. Identities = 39/261 (14%), Positives = 84/261 (32%), Gaps = 17/261 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L + + +ER+VT+AA+R+ + +S+ + L LF + G+ T Sbjct: 1 MELRHIRYFLAVAEERNVTRAAERLGIGQPPLSQQIHALEDELGVRLFRRTGHGVVLTEA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMM-IMLNALSKQIYQRYPQ 125 S + + + L ++ +F + +++ L + Q YP Sbjct: 61 GESFAADAKRILHDTRLAVENAQSAGRGEIGQFNIGFTGSAAFNPVVSKLIRAYRQAYPN 120 Query: 126 ATIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 T+ L L + VD+ F S P + + + + + L Sbjct: 121 VTLTLAEGNTAQLLAYLDDDRVDVAFVRLGSQS---------PAGVQFHHIAIEPMKIVL 171 Query: 185 RKDHPALHQT-WNLDTFLRYPHISICW--EQSDTWALDNVLQELGRERTIAMSLPEFEQS 241 H + L P + + + + +E G E P+ Sbjct: 172 PATHRLAKKRKIALSALAEDPFVMLPREASPTLHDVIVGACREAGFEPIAGQQAPQLSSV 231 Query: 242 LFMAAQPDNLLLATAPRYCQY 262 + + A ++ P Sbjct: 232 VNLVAAE--FGVSLVPASVCQ 250 >UniRef50_Q2RLB0 Transcriptional regulator, LysR family n=1 Tax=Moorella thermoacetica ATCC 39073 RepID=Q2RLB0_MOOTA Length = 297 Score = 202 bits (516), Expect = 1e-50, Method: Composition-based stats. Identities = 37/265 (13%), Positives = 88/265 (33%), Gaps = 17/265 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +++N L + Q +S+++AA+ ++++ S++S + L D LF + G+ T + Sbjct: 1 MNINHLEAFCTVAQVKSISEAARILHMSQSSLSYQIQLLEKDLDVELFTRTTKGVELTEM 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQAT 127 + + ++Q++ L + + A S + L ++YP A Sbjct: 61 GEIVYEYGQTFLQLAENLRRDLDNWKSGQEHLIVGASSSIGSYALPCTIYSFKEKYPDAN 120 Query: 128 IKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRK 186 +KL + +++ + +DIG + + D + + Sbjct: 121 VKLLVGNREETIQKLLDKTIDIGLIEGPVDQP----------GLATRGVTEDELLLIVPA 170 Query: 187 DHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGR---ERTIAMSLPEFEQSLF 243 ++ L+ R P I + L E G + + L + Sbjct: 171 GWQ-GQESITLEELCRLPLILREEGSGTRQVIARALAEHGLGIANLNVVLELNSNDAIKS 229 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQ 268 ++ R + Sbjct: 230 AI--TAGHGVSLLSRLATRREIHNG 252 >UniRef50_C0CT29 Putative uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0CT29_9CLOT Length = 304 Score = 202 bits (516), Expect = 1e-50, Method: Composition-based stats. Identities = 45/319 (14%), Positives = 103/319 (32%), Gaps = 29/319 (9%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++ L + + +E+S++KAA+++ VT A+S L +L + PLF+ GL PT Sbjct: 1 MNTRELEYILAIAKEKSISKAAEKLYVTQPALSLFLTRLESQLGTPLFIRGASGLIPTFA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNALSKQIYQRYPQA 126 Q + ++ + + + ++ + + +L + + YP Sbjct: 61 GERYIQMSQKVLKDYRDFEQELCDISSLHMGRLKVGTSAHIGSYVLPQVIPLFNRTYPNI 120 Query: 127 TIKLRNWDYDSLDAITRG-EVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + + + L+ + G E+D+ L + +Y + + + Sbjct: 121 EVSISEGNSQVLEHMISGNELDVAL----------MHLPLKHIEANYVEIARERYVMAFS 170 Query: 186 KDHPALHQ----------TWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSL 235 KDHP + + + Q D +L++ G I ++ Sbjct: 171 KDHPLNRKLSPREGETYPYIDPRAAAGQKFVLSFPYQRVRQISDRILEKAGITPDIILTT 230 Query: 236 PEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWH 295 + +L L + P P+ + F +++ Sbjct: 231 SSVQTALRF--AGVGLGVTFLPESYIQL-----FRCTHEPVFCYMDDDFEAYWTFVVVYP 283 Query: 296 KRNSHNPKIVWLRETIKNL 314 + + E K Sbjct: 284 GDVTLSGPARAFIELTKEA 302 >UniRef50_Q48IW5 Transcriptional regulator, LysR family n=8 Tax=Pseudomonas RepID=Q48IW5_PSE14 Length = 299 Score = 202 bits (516), Expect = 1e-50, Method: Composition-based stats. Identities = 41/314 (13%), Positives = 90/314 (28%), Gaps = 25/314 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +L+ L C + E + +AA+R+N+T +S+ + + LF S ++ T Sbjct: 2 FELSQLRCFTTVATELNFRRAAERLNMTQPPLSRQIQIMEHNLGVELFTRSTRSVALTAA 61 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + ++ + ++ + L + + + PQ Sbjct: 62 GRAFFIEAQTLLERAQQAAISARRFAEGDIGSVTISFVGSAVYEFLPRVIAEARLKQPQV 121 Query: 127 TIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 I L Y +A+ +D+G + E L + + + Sbjct: 122 KISLTEMNTYQQHEALRARRIDLGIVRAPLFQP----------GYESECLVREPFVLAVP 171 Query: 186 KDHPAL-HQTWNLDTFLRYPHISICWE--QSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 +H + + P + L + + L L Sbjct: 172 GNHRLAHADSVTVADLEGAPFLMYSHSAYPPFNELLTGMFRSARVAPEYVQWLGSSLTIL 231 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 + + LA PR +V + + ++ L+W N + P Sbjct: 232 ALVNA--GMGLALVPRCATNVVFK---DVVFRDIDL----GEGVQSELHLVWRADNDN-P 281 Query: 303 KIVWLRETIKNLYA 316 L + I+ Sbjct: 282 ACRMLLKAIRAAVR 295 >UniRef50_O32255 Uncharacterized HTH-type transcriptional regulator yvbU n=78 Tax=Bacillus RepID=YVBU_BACSU Length = 292 Score = 202 bits (516), Expect = 1e-50, Method: Composition-based stats. Identities = 51/315 (16%), Positives = 100/315 (31%), Gaps = 29/315 (9%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPL-GLSPTP 66 + + L + + S TKA + +N+T AVS +++ + A D L + GL T Sbjct: 1 MTITQLKVFVKIAETGSFTKAGQALNMTQPAVSHAISAIEAELDVKLIIRDRRNGLMLTD 60 Query: 67 LMVSMEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNALSKQIYQRYPQ 125 + ++ E ++ + + + S + L + Q+YP+ Sbjct: 61 TGKQILVHIREVLKGIEKVEQVAAAEKGLELGTIHIGTFSTASAYFMPKLISEFKQKYPK 120 Query: 126 ATIKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 + L + + + + +D+G + ++Y L D V L Sbjct: 121 LELVLHEGTVNEVKEWLHTRMIDVGILLYPTE------------EMEYIHLKKDKMAVVL 168 Query: 185 RKDHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 R DHP H L P I + ++ ++ G A ++ S+ Sbjct: 169 RDDHPLASHSAITLKDLDHEPMIV--CDGGYESPFIDMFRQAGATLHPAFTVYNINTSIS 226 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQ-QKKLEVPFTLLWHKRNSHNP 302 M + L LA LP + ++ L + Sbjct: 227 MIRE--GLGLAILSEMSMSGM--------PLPEHVVTRELDPQVYRDVQLAVPSLKEASL 276 Query: 303 KIVWLRETIKNLYAS 317 E K L+ + Sbjct: 277 AAKLFIEMAKELFGA 291 >UniRef50_UPI0001B54141 LysR family transcriptional regulator n=1 Tax=Streptomyces sp. C RepID=UPI0001B54141 Length = 298 Score = 202 bits (516), Expect = 1e-50, Method: Composition-based stats. Identities = 79/310 (25%), Positives = 129/310 (41%), Gaps = 20/310 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +DLNLL L L+QE SVT+AA+R+ +P+AVS++LA+LR DPL V + GL PTP Sbjct: 1 MDLNLLRVLDALLQENSVTRAAERLGTSPAAVSRTLARLRRTVGDPLLVRAGQGLVPTPR 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQT--PRGLKFELAAESPLMMIMLNALSKQIYQRYPQ 125 V + + + ++ + +L F + A L++ + +L+++I+ PQ Sbjct: 61 AVELREEVGALIRGCDNVLRPGAGFDAVHLQRTFTVQATDLLLVGLAGSLTERIHAEAPQ 120 Query: 126 ATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + + + +G VD+ +L L I L R Sbjct: 121 VDVVFLPEAVEGGPGLRQGLVDVELG----------VLGHLDPEIRTRRLTRMPLVGIAR 170 Query: 186 KDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMA 245 HP + F HI I +D+ L ELG R A+ +P ++ +A Sbjct: 171 TGHPLFDGRIDARRFAAADHIGISRLGKRLGPIDSALAELGLRRRTAVVVPSHTSAMMLA 230 Query: 246 AQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIV 305 D + L+ A + L +PL + + + WH RNS +P Sbjct: 231 RDTDLVALSLADWIPDTIAAM-GLRAFPVPLDLE-------PLDLGMAWHPRNSADPGHR 282 Query: 306 WLRETIKNLY 315 W RE + Sbjct: 283 WFREHLAAAV 292 >UniRef50_B0C1S6 Transcriptional regulator, LysR family n=2 Tax=Cyanobacteria RepID=B0C1S6_ACAM1 Length = 298 Score = 202 bits (516), Expect = 1e-50, Method: Composition-based stats. Identities = 53/311 (17%), Positives = 104/311 (33%), Gaps = 26/311 (8%) Query: 7 TLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTP 66 +++ L +L +E +AA R+++T A+SK + L LF + ++ T Sbjct: 4 SIEFRQLQSFVVLAEELHFGRAADRLDITQPALSKQILVLEKAVGVQLFFRTKRTVTLTH 63 Query: 67 LMVSMEQNLAEWMQMSNLL-LDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQ 125 + + + + L + + +L L +Q QRYP+ Sbjct: 64 AGQTFLHQARQLLLQRDQAILLTRRTGDGEIGQLSIGFTKTATQTVLPQLLRQFVQRYPE 123 Query: 126 ATIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 + LR + A+ + +D+ F R + +++ ++ L Sbjct: 124 VDLDLRELATEAQVTALNQDNIDVAFLHPPIDQR----------GLQLQIILAESFVAVL 173 Query: 185 RKDHPALH-QTWNLDTFLRYPHISICWEQS--DTWALDNVLQELGRERTIAMSLPEFEQS 241 HP +H L+ F P I + V Q G + I + Sbjct: 174 PPQHPFVHLDAIPLEAFANEPLIVHPRREGPILYDGFQQVCQRAGFQPNIIKESITLQTR 233 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 L + A L + L +V P+ Q +++ F W + N+ N Sbjct: 234 LCLVAA--GLGITFVS---DRLQALVGTNVVCRPI-----QDCPIQLEFGAAWRQ-NAAN 282 Query: 302 PKIVWLRETIK 312 P + E + Sbjct: 283 PVLQNFLELLV 293 >UniRef50_C1XNG0 Transcriptional regulator, COG0583 n=2 Tax=Meiothermus RepID=C1XNG0_MEIRU Length = 312 Score = 202 bits (516), Expect = 1e-50, Method: Composition-based stats. Identities = 45/304 (14%), Positives = 94/304 (30%), Gaps = 21/304 (6%) Query: 7 TLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTP 66 + L L+ + + S++KA +NVT S V++++ KL LF G+ T Sbjct: 2 QISLKQLVYFIAVAESGSISKALTSLNVTQSVVTEAIKKLEETLGAELFTRHARGMILTH 61 Query: 67 LMVSMEQNLAEWMQMSNLLLDKPHH-QTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQ 125 ++ E + + L S + L L + + +P Sbjct: 62 AGHQFLRHAHEVLAALRNAEQAIRERPDATTGQLNLGVTSLVTAYYLPYLLDRFERVFPG 121 Query: 126 ATIKLRNWDYDSLDAIT-RGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 + + ++ + GE+D+ + A++ L VWL Sbjct: 122 VQVAVVEDRRGYIEHLLINGELDVAVM---------NVSMVDKQALETRTLLRAPWRVWL 172 Query: 185 RKDHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 +HP + Q +L+ + + G +A+ E Sbjct: 173 PTNHPLVQQEAVSLENLREERF-LYLKNDELEEVTQQIYRLSGF-PRVAVRTDSIEAMRS 230 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 + A + +A P L L + PL + + + W + ++ + Sbjct: 231 LVA--LGIGVAVLPNLMYRPWSLEGDRLESRPL-----LENLPRLEIGVAWRRGSALSEA 283 Query: 304 IVWL 307 Sbjct: 284 ARQF 287 >UniRef50_C9LCS7 Putative transcriptional regulator n=1 Tax=Blautia hansenii DSM 20583 RepID=C9LCS7_RUMHA Length = 289 Score = 202 bits (516), Expect = 1e-50, Method: Composition-based stats. Identities = 44/307 (14%), Positives = 99/307 (32%), Gaps = 21/307 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 + L L + + S+T AA+ +N+ AVS ++ +L +++ LF L T Sbjct: 1 MTLRHLKIFSAVCRLESITLAAEEMNMAQPAVSYAIRELEGYYETKLFERMNRRLYITEA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQAT 127 + + + D K + + + L L + Y Q Sbjct: 61 GEQLLIYADSILAQFDEARDVLRDIQTVT-KVRVGTNASYGISYLPQLIAGFKEEYGQIP 119 Query: 128 I-KLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRK 186 I L + + + R ++D G + S+ P + +D Sbjct: 120 IYTLVDNSRQIEEKLIRNDLDFGITDYPSN----------PQFFRSVPVGTDKMIAVCSS 169 Query: 187 DHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAA 246 D+ + ++ + P + ++ +L + ++ I M + A Sbjct: 170 DYSW-QGSAKMEELIEMPLLLRELGSGSRSMVEALLSKYKKKPEIVMESISIRSLIEACA 228 Query: 247 QPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVW 306 + +LL T + Y + H L + + + + ++HK + Sbjct: 229 KGMGVLLLT-KSVLEPYMKSHHLR-------EIKITDESIVREYYFVYHKSKFLTKSMKC 280 Query: 307 LRETIKN 313 +E + Sbjct: 281 FQEFVLE 287 >UniRef50_C0VZJ2 Oxidative stress transcriptional regulator n=1 Tax=Actinomyces coleocanis DSM 15436 RepID=C0VZJ2_9ACTO Length = 301 Score = 202 bits (516), Expect = 1e-50, Method: Composition-based stats. Identities = 45/283 (15%), Positives = 91/283 (32%), Gaps = 19/283 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +++ L +L+ ERS TKAA R V+ +S + KL L + G+ TP+ Sbjct: 1 MNIRDLRYFTVLVDERSFTKAAARCGVSQPTLSTQIRKLEEKIGATLVERASQGIIITPV 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQ-TPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + + + + + P F L L +L + +I + P Sbjct: 61 GQEILEYARSIIDKAEAIQNYADRAKDPHSGTFTLGMFPTLGPYLLPHIMHRIQKELPNI 120 Query: 127 TIKLRNWDYDSL-DAITRGEVD-IGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 T++L + L + ++RGE+D I R + + LF + Sbjct: 121 TVRLVEEKSEILSEMLSRGELDGIVLGEEPHDER-----------LIVKHLFDEEFVFAS 169 Query: 185 RKDHPAL--HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 DHP + ++ + + + + + F Sbjct: 170 TADHPLANLDRPLTVEDLNGTELLLLTEGHCLRQQSLEICHTAQAK-QVDFRASSFPALR 228 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKK 285 +M A + + PR+ ++ L + Sbjct: 229 YMVAS--GIGASLFPRFSVIPPIMNPETLKITEFAQPRPSRHI 269 >UniRef50_Q7W108 Probable LysR-family transcriptional regulator n=2 Tax=Bordetella RepID=Q7W108_BORPA Length = 305 Score = 202 bits (516), Expect = 1e-50, Method: Composition-based stats. Identities = 41/309 (13%), Positives = 93/309 (30%), Gaps = 24/309 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +D + L C + +E SV+ AA R+++T +S L KL LF L PT Sbjct: 1 MDEHRLKCFVAVYEEGSVSAAAVRLHMTQPPLSILLRKLEDELRVGLFDRGGRRLVPTAA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQT-PRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + + + + + ++ + + + + Sbjct: 61 GELFYLRAKAMLANLQTIRRELREVEQGARGLVHIGCSTAASLFIVPRVMEDLAAEGLEI 120 Query: 127 TIKLRNWD-YDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + + + L + +D+ + + ++ +V+ + V L Sbjct: 121 VLHVHEGEIGYMLQQLRERSLDLTICRSQH----------MAPDLESQVIMEEPLFVALP 170 Query: 186 KDHPALHQ-TWNLDTFLRYPHISI--CWEQSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 HP + L + + + + G + E Sbjct: 171 PGHPLAGRARVRLADLRDERFLLHRSPLGTGISDMVLRACRNAGFAPNVVYWGG--ETLP 228 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 + L +A AP+ LV + + ++W ++ + +P Sbjct: 229 MLLMARRGLGIAFAPQSFAQLGLQGLAALVPV-------ADAEFRTHLNMVWPRQQALSP 281 Query: 303 KIVWLRETI 311 W+RE I Sbjct: 282 IASWVRELI 290 >UniRef50_Q1DBN8 Transcriptional regulator, LysR family n=2 Tax=Cystobacterineae RepID=Q1DBN8_MYXXD Length = 301 Score = 202 bits (516), Expect = 1e-50, Method: Composition-based stats. Identities = 38/317 (11%), Positives = 85/317 (26%), Gaps = 26/317 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++ L + +E +AA RI + S+ + +L + L + ++ T Sbjct: 1 MEFRQLQLFVAVAEELHFGRAAARIGMAQPPFSQQIRRLESELGVELLTRTSRRVALTAA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQT-PRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + ++ + ++ + + +L + + R+P+ Sbjct: 61 GSRLLEDARALLARRADVIHSVQQAASGETGTLRVGFAASSAFGVLPDIVLRFRTRFPKV 120 Query: 127 TIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 ++L + + D A+ GE+DI + E L + + L Sbjct: 121 KLELDDSETLDVGAALVSGELDIAIIRAP----------FRHEGLTVERLLQERFVLALP 170 Query: 186 KDHPALHQT-WNLDTFLRYPHISICWEQ--SDTWALDNVLQELGRERTIAMSLPEFEQSL 242 HP Q L + P + + ++ G I + + Sbjct: 171 ARHPRARQQVVALSSLANEPFVLFPRHSAPGLHDLVTSMCLGAGFSPNILQEASSWPSVV 230 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 M L +A A L + F + + P Sbjct: 231 GMVEAGLGLTIAPASSQA----------LCPKGVVFRPLSGAPGHAELVVAFPGTRPA-P 279 Query: 303 KIVWLRETIKNLYASMA 319 R + Sbjct: 280 AAQHFRVLAHEAVSRSG 296 >UniRef50_Q1Z9L0 Putative transcriptional regulator, LysR family protein n=1 Tax=Photobacterium profundum 3TCK RepID=Q1Z9L0_PHOPR Length = 320 Score = 202 bits (516), Expect = 1e-50, Method: Composition-based stats. Identities = 85/322 (26%), Positives = 146/322 (45%), Gaps = 14/322 (4%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFD----DPLFVNS 58 +I +DLNLL + LL++E SV+ A R+N+T SAVSK L +LR DPLFV + Sbjct: 1 MNINHIDLNLLRLMLLLLEEGSVSSVATRLNLTQSAVSKQLTRLREQLGGELNDPLFVRT 60 Query: 59 PLGLSPTPLMVSMEQNLAEWMQMSNLL-LDKPHHQTPRGLKFELAAESPLMMIMLNALSK 117 GL PT V +EQ L W+Q S + + +F+++ +++ L Sbjct: 61 GRGLEPTAQAVKLEQPLRHWLQSSQKMFVPDTFIPAEDKREFQISICETSFSVVVPLLLP 120 Query: 118 QIYQRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDY-EVLF 176 ++++ P I + + DSL + G++D+ +++ R++ L L+ Sbjct: 121 KLHRLAPGMKINIVSKSADSLQRLREGQLDLLVIAKDTDQRAQISSQVTELKRQSNHELY 180 Query: 177 SDVPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLP 236 D LR +HP L + W FL+ P I + E++ W LD V+ E G +P Sbjct: 181 QDHHVCLLRSEHPILEKKWGNAAFLQVPQIRVLVEENKFWLLDQVVAESGHCLDSKTIVP 240 Query: 237 EFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHK 296 +F + + D +L+ T + + + + L + LP V + +LW + Sbjct: 241 DFNSAALLVQHTDMMLVCT-SIFARKLAKSYSLQQLPLPF-------NLKPVSYRMLWPE 292 Query: 297 RNSHNPKIVWLRETIKNLYASM 318 H+ +WLR I + Sbjct: 293 TLEHDAAHLWLRGIISGCCQEL 314 >UniRef50_B8DKN9 Transcriptional regulator, LysR family n=4 Tax=Proteobacteria RepID=B8DKN9_DESVM Length = 699 Score = 202 bits (515), Expect = 1e-50, Method: Composition-based stats. Identities = 41/307 (13%), Positives = 89/307 (28%), Gaps = 19/307 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L + + S +AA +N S VS +A L LF ++ T Sbjct: 1 MELRDLRTFAAVARLLSFHRAAAELNAAQSTVSARIAALETELGVRLFERLGRRVALTEA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQAT 127 + Q A+ + + + ++ + L L + +R+P+ Sbjct: 61 GERLVQYAAKLIDVEDEARAWVTGESRLRGLLTVRVPESLCAYRLPPVIAAFRRRHPEVA 120 Query: 128 IKLRNWDYDSLD-AITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRK 186 + L + L+ + +G D+ F +S ++ E L + + Sbjct: 121 LHLTACTLNGLEKDLRQGITDLAFVMADSVRGG---------DLNVEALGVEPLVLVAAP 171 Query: 187 DHPA-LHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMA 245 HP + + + ++ L G + + Sbjct: 172 HHPLAARDRVVARDLHGITLVLSTTDCAYRTVIEEALAAEGIQPAAGLEFSSASALRGCV 231 Query: 246 AQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIV 305 A + + P L AL + E ++ H+ +P + Sbjct: 232 AS--GVGITLLPEAAVRDELRAG-TLRAL-----AWADQPFETAVLMVRHRGKWVSPYMD 283 Query: 306 WLRETIK 312 E + Sbjct: 284 TFMELCR 290 >UniRef50_B1HZ14 Transcriptional regulator-like protein (LysR family) n=2 Tax=Bacillaceae RepID=B1HZ14_LYSSC Length = 295 Score = 202 bits (515), Expect = 1e-50, Method: Composition-based stats. Identities = 43/308 (13%), Positives = 99/308 (32%), Gaps = 22/308 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L +++ S TKAA V+ ++SKS+ KL L S + T Sbjct: 6 MELRDLKAFMSVVEHGSFTKAANESFVSQPSLSKSIKKLEDTLHVELLNRSTRNVELTDA 65 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTP-RGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + + M L + +L + + ++++ +Q+YP Sbjct: 66 GSIVFKQGQKIMLSVQDLHILLDDLLNIKTGSIKLGIPPLIGTLFFPKIAREFHQQYPDV 125 Query: 127 TIKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 ++L ++ + G VD+G + R + D V++ Sbjct: 126 HLELVERGAKTVGTLVENGNVDMGIVVLPTDERK----------FSVQPFVEDQFYVFIN 175 Query: 186 KDHPALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 + HP + L I E + + + +G + +++ + + Sbjct: 176 ELHPLAQFKEIQLQDLKNETFIIFAEEFALHDYVIKSCESVGFSPHVGYKSSQWDLIVEL 235 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 NL + P + ++ L + ++ K + + Sbjct: 236 V--SSNLGITLLPYSIAAKQTNKNVKMIPL-------ANFDMPWRLGIITKKNTYQSYAL 286 Query: 305 VWLRETIK 312 L T++ Sbjct: 287 KQLLNTMR 294 >UniRef50_D1RNC3 Transcriptional regulatory protein n=1 Tax=Serratia odorifera 4Rx13 RepID=D1RNC3_SEROD Length = 310 Score = 202 bits (515), Expect = 1e-50, Method: Composition-based stats. Identities = 41/315 (13%), Positives = 83/315 (26%), Gaps = 25/315 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L + +E S +AA+R+++ ++ ++ K+ PL T Sbjct: 2 IELRQLRQFIAVAEEMSFHRAAERLHMAQPPLTAAIRKIEQELGVPLLERGNRITRITEA 61 Query: 68 MVSMEQNLAEWMQMSNLLL-DKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + L + L + +L + +Q +P A Sbjct: 62 GQVFLIEARRTLAQFERTLGNTRRAARGLTESLRLTFVDSTVNALLPGILRQFRLEHPLA 121 Query: 127 TIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 L+ + L A+ DIG P+ + + D + L Sbjct: 122 EFHLQEATTAEQLIALRDDRADIGMVVLPVAPQE---------GLQIQPFLFDRMVLALP 172 Query: 186 KDHPA-LHQTWNLDTFLRYPHISICW--EQSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 HP + L P + A+ G I + + Sbjct: 173 DHHPLAAQRQVTLRDLDDEPWLLFPAHYGPGMHAAILQACAVAGFSPRIVQEARQMQTIG 232 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 + A + +A P + + L + L W + +P Sbjct: 233 GLVAG--GVGIALMPALFAVL-KSPGVVFREL-----SGVGSPVPYTLALAW---QTPSP 281 Query: 303 KIVWLRETIKNLYAS 317 A+ Sbjct: 282 LTDAFCRIAAEQAAA 296 >UniRef50_Q122D0 Transcriptional regulator, LysR family n=1 Tax=Polaromonas sp. JS666 RepID=Q122D0_POLSJ Length = 310 Score = 202 bits (515), Expect = 1e-50, Method: Composition-based stats. Identities = 62/322 (19%), Positives = 117/322 (36%), Gaps = 26/322 (8%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 + LDLNLL L + + SVT A K ++++ A S +LA+LR +F D LFV +P GL Sbjct: 1 MNFRQLDLNLLRVLAAIHRTGSVTHAGKALSLSQPATSNALARLRDFFGDELFVRAPSGL 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLL--DKPHHQTPRGLKFELAAESPLMMIMLNALSKQIY 120 PT L + + + ++ + + + L+ M+ L AL+ + Sbjct: 61 KPTRLCEQLAPAVLAQLLALETVVTGHEEFEAAHSDMHWRLSLSDLGEMLFLPALAGALR 120 Query: 121 QRYPQATIK-LRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 + P A + + D A+ E+D+ + R I E+LF + Sbjct: 121 SQAPGARLSNISVAANDVAAALEAREIDLAIGILQPRQR----------GIRTELLFREN 170 Query: 180 PCVWLRKDHPAL----HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSL 235 +T + + +++ +L + + I + Sbjct: 171 YVAVASPQWRPASGRSGRTLTTQQLAEAAFVVASPTATFHGSVEQMLVRMKLQDRIVLRA 230 Query: 236 PEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWH 295 F +A D L + Y + Q + + +P L+WH Sbjct: 231 RHFGALPDLALATDLLSI-VPEMYARNLRQRYDFRVWGIP--------GAPSYEVRLVWH 281 Query: 296 KRNSHNPKIVWLRETIKNLYAS 317 ++P W+R ++ L+ Sbjct: 282 SSTDNDPAHQWMRALVQQLFRR 303 >UniRef50_Q0F2Z7 Transcriptional regulatory protein, LysR family n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0F2Z7_9PROT Length = 308 Score = 202 bits (515), Expect = 1e-50, Method: Composition-based stats. Identities = 47/322 (14%), Positives = 83/322 (25%), Gaps = 24/322 (7%) Query: 1 MKKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPL 60 M+ + L ++ ++ S T+AAK + +T AVS + ++ LF S Sbjct: 1 MRVVFMHISLKQFKIIEAVVDYNSYTEAAKALYMTQPAVSMQIKQIEGQLGLQLFERSGK 60 Query: 61 GLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQI 119 + T + Q K L + L Sbjct: 61 QIKATEAGKELLHYARNIRQQMEEAKTVLEELKGLKRGKLHL-TMASTASYFAPRLLAAF 119 Query: 120 YQRYPQATIKL-RNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSD 178 + +YP + L LDA+ D+ GR + + L Sbjct: 120 HHQYPGVKVTLDVTNRSGLLDALDNNTTDMAIMGRPPEGHALTGIPFLDN---------- 169 Query: 179 VPCVWLRKDHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPE 237 V +HP + L I A + E T M + Sbjct: 170 PLVVIAWPEHPLACSDSIPLSDVADESFIVREAASGTRMATERYFSEHRLSLTPGMEMNR 229 Query: 238 FEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKR 297 E L + + + L P + ++ H+ Sbjct: 230 SEAIKQAVMAELGLGIVSLHTIEMELTLKRLVILKVEDFPI--------MRHWYIV-HRN 280 Query: 298 NSHNPKIVW-LRETIKNLYASM 318 N I R+ + S+ Sbjct: 281 NKRFAAIQKVFRDFAVSESRSL 302 >UniRef50_B3E4Z6 Transcriptional regulator, LysR family n=3 Tax=Desulfuromonadales RepID=B3E4Z6_GEOLS Length = 304 Score = 202 bits (515), Expect = 1e-50, Method: Composition-based stats. Identities = 43/313 (13%), Positives = 92/313 (29%), Gaps = 26/313 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +D+ L + + S TKAA+++++ A+S ++ KL D L ++ T Sbjct: 1 MDVKQLKFFMGVAECESFTKAAEKLHIAQPALSIAIKKLEEELDVLLLNRRDRRITLTAE 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTP-RGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 ++ + +Q N + + + L + Q +P Sbjct: 61 GEALLLHAQGILQGVNNAKREIDDLRGLLKGEVRVGLTPMLSSYFFPKIIASFKQSHPGL 120 Query: 127 TIKLRNWDYDSLDA-ITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 I + ++ I GE+D+G +P +D L + + Sbjct: 121 KISISGDSAWNIQRKIESGELDVGVIAG-----------EVPEGLDTHHLLREEIVACVY 169 Query: 186 KDHPALHQ-TWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 HP + L LR P I +D++ E + F + Sbjct: 170 PGHPFAGRKKVALCELLREPLIHYKEGYHLRELIDDLHSEERITPVVVAESNLFTLIRSL 229 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 + L ++ + S +L + + W K + + Sbjct: 230 VKERLGLAF-FLKMVVARDAEVVAI-----------SSDPQLFMDLHIAWKKNSYLSKAN 277 Query: 305 VWLRETIKNLYAS 317 + + Sbjct: 278 RAFVDFLIRELDE 290 >UniRef50_A9WDF5 LysR substrate-binding n=3 Tax=Chloroflexus RepID=A9WDF5_CHLAA Length = 298 Score = 202 bits (515), Expect = 1e-50, Method: Composition-based stats. Identities = 51/309 (16%), Positives = 96/309 (31%), Gaps = 19/309 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 LDL L ++ S++KAA+++++T S VS+ + L LFV G+ TP Sbjct: 2 LDLYKLDIFTRVVAAGSLSKAAEQLHMTQSGVSQHIRALEDSLGTELFVRGRRGVELTPA 61 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + ++ + + + +L + QRYP Sbjct: 62 GQRLLAYCEGIFRLVAEAELAVTDVAGLRDGQLTIGVTPGVSAYLLPEWVQMFRQRYPNL 121 Query: 127 TIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + + ++ + G +D+G L S + + L V + Sbjct: 122 AVSAQTGTTPSIVNELRNGSLDLG--------AIEGELDSAERDLQQQALREFDQYVVVG 173 Query: 186 KDHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 + HP ++ +L P + LD+ L+E I L E M Sbjct: 174 RRHPWWGRSEVHLQELAGQPMVMRQSSSQTRVWLDHALREQSLTPRIIAELDNLESIKRM 233 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 L P Y Q L +P+ ++ + +P Sbjct: 234 VM--IGTGLTILPLYAVTAEQEVG-ALHPIPIAGRPLRRTLRLLWR-----ATRPLSPVA 285 Query: 305 VWLRETIKN 313 R+ + Sbjct: 286 YAFRQLLIA 294 >UniRef50_B8ERS8 Transcriptional regulator, LysR family n=1 Tax=Methylocella silvestris BL2 RepID=B8ERS8_METSB Length = 323 Score = 202 bits (515), Expect = 2e-50, Method: Composition-based stats. Identities = 68/334 (20%), Positives = 134/334 (40%), Gaps = 39/334 (11%) Query: 4 SITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLS 63 I T+DLNLL + +M+ RSV +A++ + VT SAVS +L++LR D LF++ G+ Sbjct: 3 RIRTIDLNLLRVFEAVMRHRSVIRASRELGVTASAVSHALSRLRQALGDELFISGEAGME 62 Query: 64 PTPLMVSMEQNLAEWMQMSNLLL-DKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQR 122 PT + +E + + ++ + + +P T F +AA + + +L L ++ + Sbjct: 63 PTARALELEPAIRDGLERIDHAVGAQPFVPTDAFRTFRIAATDYVAVAILPQLVGRLAEV 122 Query: 123 YPQATIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPC 181 PQ +++ ++ D + + G +D LP + + + Sbjct: 123 APQIDLRIFPFNRTDVVRHLDEGRIDFVMG----------WFGDLPDRMRRATIVVEKEA 172 Query: 182 VWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRER------------ 229 + +R HP + +PHI + ++ A+D + G R Sbjct: 173 MVVRTGHPLTEGPLTKERLFSFPHIVVELIGTEEAAVDGFFDDRGVWRRVWIERLLIEAD 232 Query: 230 -------TIAMSLPEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQ 282 +A+S+P + M D + + + L ++ LP Sbjct: 233 ADQGEVGRVAVSVPHYAAVPPMVRVSDMVA-TLPSALARAAVEQGSLVMLDLP------- 284 Query: 283 QKKLEVPFTLLWHKRNSHNPKIVWLRETIKNLYA 316 + L VP ++WH+R + WL + + Sbjct: 285 YEPLAVPVEMVWHQRTERDEGSQWLLGELISAVK 318 >UniRef50_A6W1I8 Transcriptional regulator, LysR family n=2 Tax=Marinomonas RepID=A6W1I8_MARMS Length = 326 Score = 202 bits (515), Expect = 2e-50, Method: Composition-based stats. Identities = 64/328 (19%), Positives = 123/328 (37%), Gaps = 21/328 (6%) Query: 1 MK-KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSP 59 M I LD+ LL+ +M+E SV++AA+R+ VT A+SKSL +LR F D LF Sbjct: 1 MHLDDILKLDIKLLVAFVTIMEEGSVSRAAERLGVTQPALSKSLQRLRELFKDSLFTRQA 60 Query: 60 LGLSPTPLMVSMEQNLAEWMQMSNLLLDKPH-HQTPRGLKFELAAESPLMMIMLNALSKQ 118 GLSPT + + + + L+ + +L + + L Sbjct: 61 YGLSPTARASELHDLIQPILNSLSELMSPNSLDLKNLNRRIKLRVGEGDLENFIEPLLAS 120 Query: 119 IYQRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSD 178 + + P + + +W SLD + G VD+G ++ P + +++ Sbjct: 121 LQYQAPGMRLAISSWGDYSLDELVSGNVDLGIMR----------INDTPNNVRSKLIDYM 170 Query: 179 VPCVWLRKDHPA-LHQTWNLDTFLRYPHISICWEQSDTWAL---DNVLQELGRERTIAMS 234 C+ L + HP + L + ++ + + L++ G + Sbjct: 171 EACIILSEAHPLYHKDELTVAELLSHKVVTHHLHNNRDSTFFKTEQKLKQQGYFIQPDLE 230 Query: 235 LPEFEQSLFMAAQPDNLLLA-----TAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVP 289 ++ + L+ + + + + L+ +P E + P Sbjct: 231 TDSLMVAMQAVKRGMALVASRSIGDLFLQVMCEKAHFYPVKLLPIPKEVLELDEYSGRHP 290 Query: 290 FTLLWHKRNSHNPKIVWLRETIKNLYAS 317 + WH+R +++ WLRE I Sbjct: 291 IHIFWHERFNNDLAHRWLREQIIYFMRE 318 >UniRef50_UPI0001C30F27 transcriptional regulator, LysR family n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C30F27 Length = 300 Score = 202 bits (514), Expect = 2e-50, Method: Composition-based stats. Identities = 48/315 (15%), Positives = 93/315 (29%), Gaps = 21/315 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 + + L + + VT AA ++V+ A+S++LA+++A PLF L Sbjct: 1 MTVEELRWFVAVAESEHVTAAAAELHVSQPALSRALARVQAHVGVPLFDRRGRRLRLNRY 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTP--RGLKFELAAESPLMMIMLNALSKQIYQRYPQ 125 + + + T G LA L ++ AL + PQ Sbjct: 61 GRLYLDHARRSLADLDAGTQALADATGTAGGGTVVLAFLHTLGSWLVPALLRGFGAAEPQ 120 Query: 126 ATIKLRNWD-YDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 ++L + L + GEVD+ + I+++ L + + Sbjct: 121 IALELAQGSASEMLAQLRAGEVDLILTSPRPDDP----------EIEWKPLGREPLRAVV 170 Query: 185 RKDHPA-LHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 H + L +++ E D + G IA + Sbjct: 171 APGHALAARKRIRLADLAEERFVAMKPEYGLRGLTDQLCAAAGFNPRIAFEGDDIGTLRG 230 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 + A + L P + P + L W + +P Sbjct: 231 LVAAGLGVALLPPPHSA-------GAEIEQPATPHLHLADRGAARTLGLAWDRTRYRSPA 283 Query: 304 IVWLRETIKNLYASM 318 R + A++ Sbjct: 284 TETFRAFVAAHGAAL 298 >UniRef50_C0ZI31 Transcriptional regulator n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZI31_BREBN Length = 293 Score = 202 bits (514), Expect = 2e-50, Method: Composition-based stats. Identities = 57/284 (20%), Positives = 97/284 (34%), Gaps = 25/284 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 + L L + S T+AA+ I T SAVS+ + L LF S G++PT + Sbjct: 1 MTLTQLQVFVAAAKAGSFTRAAEEIGFTQSAVSQMIQSLEKELGVSLFQRSRSGITPTSI 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTP-RGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 M + + + +++ + ++ + +A+ + L L +R+P Sbjct: 61 GERMLSHARDILNITSCMTEEANVARGISSGTLRIASIPSVASRFLPGLLGSFRKRFPAV 120 Query: 127 TIKLRNWDYDSLD-AITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 I L D D + + VDI F+ + L D V L Sbjct: 121 DILLLEGDSDEISNWLHSSVVDIAFTVMP------------DKEMQTLPLLQDEMMVILP 168 Query: 186 KDHPALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 HP QT I + +LQE T+ + E L M Sbjct: 169 DTHPLKDSQTLRFSEIAERCFIMPKDGC-----IRKMLQENQITPTVTFEVREVYTILTM 223 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEV 288 + + + P Y +VA+PL +++ L V Sbjct: 224 VQE--YIGVTIMPEL---YMPPVIPKVVAIPLSPPITREVVLAV 262 >UniRef50_A4WEP5 Transcriptional regulator, LysR family n=1 Tax=Enterobacter sp. 638 RepID=A4WEP5_ENT38 Length = 308 Score = 202 bits (514), Expect = 2e-50, Method: Composition-based stats. Identities = 63/301 (20%), Positives = 128/301 (42%), Gaps = 21/301 (6%) Query: 21 QERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSMEQNLAEWMQ 80 +E SV++AA+++++ AVS +LA+LR F+DPLFV + G+ PTP ++ L M+ Sbjct: 25 REGSVSRAAEKLHLGQPAVSNALARLREMFNDPLFVRTAGGMIPTPRAEALIAELGPLME 84 Query: 81 MSNLLLDKPHHQTP--RGLKFELAAESPLMMIMLNALSKQIYQRYPQATIKLRNWDY-DS 137 +L +P TP F L + ++ L + + P T+++ D Sbjct: 85 QMQHVLFQPASFTPASASHVFRLGMSDWVESWLMPELQAYVIREAPGITLQVSASDPFRD 144 Query: 138 LDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPALHQTWNL 197 + + E+D+ S +S + + E + S + +L + Sbjct: 145 GKQVLQREIDLAISVGQSTAAT----------LRRENIRSLNFSTLWHPEQLSLAAPLTV 194 Query: 198 DTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQPDNLLLATAP 257 ++ + H+ + + S A+D+ L G+ R + P F + + L Sbjct: 195 KNYVEHDHVLVSYRGSAWSAIDDQLALQGQSRKVRYVTPHFSSLPPLLKRIPALA-TVPS 253 Query: 258 RYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWLRETIKNLYAS 317 + + L +P+ + E+P +LLWHK++ ++ + WLR + + + Sbjct: 254 GLAAAWVTHYGLRCSPVPI-------QTPEIPLSLLWHKKSDNDMPLNWLRGVLGRVIKA 306 Query: 318 M 318 + Sbjct: 307 L 307 >UniRef50_C0D867 Putative uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D867_9CLOT Length = 301 Score = 202 bits (514), Expect = 2e-50, Method: Composition-based stats. Identities = 50/312 (16%), Positives = 93/312 (29%), Gaps = 25/312 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +DL L +++E +T+AA R+++ A+S SL +L LF + Sbjct: 1 MDLLQLKYFCAIVEEGHMTRAAARLSIAQPALSASLGRLEKELGVSLFDRVGRNICLNEC 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNALSKQIYQRYPQA 126 S ++ + + + L + L + +P Sbjct: 61 GQSFYAFVSPALALLENAARSVDDFKQQRLDNLVLG---SVSQTYLQDAIMAFKRLHPDI 117 Query: 127 TI-KLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 I + ++ + + + D + EVL+ D + L Sbjct: 118 RISQFTIEPENADRELNQNDFDFLLIPKYLERP----------DFIQEVLYEDRFALALN 167 Query: 186 KDHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 HP QT L IS+ + D + G +AM + L + Sbjct: 168 TSHPLAEQTEVRLADLKDESFISLPKGYAFRDFTDQICLSAGFTPGVAMECFHCQ-MLDL 226 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 + L +A P + L+ + LPL + L + K Sbjct: 227 ISA--GLGVALVPESFRKKC-LYNHTVKVLPLAGPPVIRPMLVS-----YKKARYMTKAA 278 Query: 305 VWLRETIKNLYA 316 E + YA Sbjct: 279 RAFLEFLHEYYA 290 >UniRef50_A6FLE2 Transcriptional regulator, LysR family protein n=1 Tax=Roseobacter sp. AzwK-3b RepID=A6FLE2_9RHOB Length = 323 Score = 202 bits (514), Expect = 2e-50, Method: Composition-based stats. Identities = 65/321 (20%), Positives = 124/321 (38%), Gaps = 21/321 (6%) Query: 1 MKKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPL 60 M + +L LL+ L + SV+ AA+R++++ VS +L +LR D LF Sbjct: 3 MMNTYRRSELGLLVVLVAIADTGSVSAAAERMSLSQPTVSHALRRLRDITGDQLFELIGR 62 Query: 61 GLSPTPLMVSMEQNLAEWMQMSNLLLDK-PHHQTPRGLKFELAAESPLMMIMLNALSKQI 119 + PT + M ++ +N LL T +++ ++ + + ++ Sbjct: 63 QMVPTAVATQMIDEARLVVEGANALLRPRAFDPTANSPTWKIGVSDYSLLALGAQILDRL 122 Query: 120 YQRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 A I+ +LD + + D F G + I LF D Sbjct: 123 SAINQAARIEFTPLGPHTLDDLLALKTDFAFYGDIVD-------PRISPPIVAVELFKDK 175 Query: 180 PCVWLRKDHPALH----QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSL 235 + + HP +LD +L+Y HI +++ L +LG +RTI ++ Sbjct: 176 YVGVMCRSHPLAKTTRSDAISLDDWLQYNHIGFTSATPGVSSINQALLKLGLKRTIGLTS 235 Query: 236 PEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWH 295 P + +L + + LL P + LP+ + P+ +L H Sbjct: 236 PSHQMNLKLLSGTTMLL--CLPERLVHLVNKKAFITFHLPIHVE-------PYPYYILHH 286 Query: 296 KRNSHNPKIVWLRETIKNLYA 316 +R NP + ++R+ I ++ Sbjct: 287 ERLYANPALQFMRDIIHDVCD 307 >UniRef50_D0I933 Putative transcriptional regulatory protein LysR-family n=1 Tax=Grimontia hollisae CIP 101886 RepID=D0I933_VIBHO Length = 307 Score = 202 bits (514), Expect = 2e-50, Method: Composition-based stats. Identities = 45/305 (14%), Positives = 96/305 (31%), Gaps = 19/305 (6%) Query: 10 LNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMV 69 + + V++AA ++V+ SA++ ++ +L + LFV P G+ T Sbjct: 5 MKQIRYFIATADSGQVSQAANAMHVSQSAITTAVKQLEEMLNVSLFVRQPHGMLLTYEGN 64 Query: 70 SMEQNLAEWMQMSNLL-LDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQATI 128 Q+ ++ L LA L + + + YP + Sbjct: 65 QFYQHATHIVKELEEAMLLSHRRANQVSGTITLAMSYTLAGYFVPPYLTRFQRSYPNVNV 124 Query: 129 KLRNWD-YDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKD 187 KL + + + GE D+ F + I ++ L S +WL Sbjct: 125 KLVEATRSNIEEGVVSGEFDVAFMLTSNLLNQE--------DISFQTLLSSQRRLWLSSS 176 Query: 188 HPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAA 246 HP L + L +YP+I + +++ + + E + A Sbjct: 177 HPLLERKMVTLHDVAQYPYIMLTVDEAS-NTAQRYWNQTPYQPNTVFRTTSVESVRSLVA 235 Query: 247 QPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVW 306 ++ + L + PL + ++W ++ + + Sbjct: 236 --NDYGITILSDMVYRPWSLEGRRVEVRPLA-----DHVPAMDVGVVWSRKRERSSAVKA 288 Query: 307 LRETI 311 E + Sbjct: 289 FCEFM 293 >UniRef50_C6VMS1 Transcription regulator n=11 Tax=Firmicutes RepID=C6VMS1_LACPJ Length = 301 Score = 202 bits (514), Expect = 2e-50, Method: Composition-based stats. Identities = 43/318 (13%), Positives = 108/318 (33%), Gaps = 27/318 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L+ L L + + T+ AK +++T +++K++ L A + LF + ++ TP Sbjct: 1 MNLDHLRYFVALSRTENYTQTAKLLHITQPSLTKAIHSLEAELNIDLFQKAGRSVTLTPA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQAT 127 ++ + + + + + +AA L + L ++++ Q P A Sbjct: 61 GKVFASDVESALLLLDKSVTNIKRFDQQKAPIRIAALRTLSIKWLPDIAQRFLQLSPHAA 120 Query: 128 IKLR-----NWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCV 182 ++ + D L+ + + D+ F + H I++ + Sbjct: 121 VQFQFNTDTGLSPDILNGLRNNKYDVAFCSKMDHFS----------DIEFFPVAEQTMVC 170 Query: 183 WLRKDHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQS 241 HP + NL L YP I+ + + + G + A ++ E + Sbjct: 171 ITPTTHPLANRSSINLAETLAYPQITFSQRSGLHPIMQKLFNDCGGQPISAYAVEEDQAI 230 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 + A + + Q P+ + + K + Sbjct: 231 AGLVASGFGIAVVPNMSILQTM-----------PVKIIPLSFPTWQRILYMGTLKHRTPQ 279 Query: 302 PKIVWLRETIKNLYASMA 319 P + +++ +++ Sbjct: 280 PAVEEFITFVRDQSKTLS 297 >UniRef50_A0R5A9 Transcriptional regulatory protein n=16 Tax=Bacteria RepID=A0R5A9_MYCS2 Length = 309 Score = 202 bits (514), Expect = 2e-50, Method: Composition-based stats. Identities = 42/310 (13%), Positives = 100/310 (32%), Gaps = 25/310 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 L+ L C + +E +AA+R+++T +S+ + +L L + ++ TP Sbjct: 2 FSLSRLSCFIAVAEELHFGRAAERLHMTQPPLSRQIQQLENELGVHLIDRTTRSVTLTPA 61 Query: 68 MVSMEQNLAEWMQMSN-LLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 V+ + +Q++ L+ + + +L L ++ P Sbjct: 62 GVAFLPDARRILQLAEGAALNVKRVPAGDLGTVVIGFTAASAHAVLPRLLDAAREQLPDV 121 Query: 127 TIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 T+ LR ++ + GE+D+G + + L + L Sbjct: 122 TLDLREMVTAAQIEGLMTGELDLGMARPPLKRP----------GLVSRPLLHEQLIAALP 171 Query: 186 KDHPA--LHQTWNLDTFLRYPHISICWEQSDT--WALDNVLQELGRERTIAMSLPEFEQS 241 HP + + L+ I Q+ L + G + + Sbjct: 172 ASHPLVDVGRQLTLNDLDGQDMIMYSPVQARYFNELLISTFTIAGATPRYVQYVTQVHTM 231 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 L + + +A P + + ++ ++ V +W +++ Sbjct: 232 LVLVRS--GIGIALVPASAATLHP-EGVVFRSI------GAFRERPVELDAVWRGDSTNP 282 Query: 302 PKIVWLRETI 311 + LR+ + Sbjct: 283 ALLRLLRDVL 292 >UniRef50_A9F1C1 Transcriptional regulator, LysR family n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9F1C1_SORC5 Length = 303 Score = 202 bits (514), Expect = 2e-50, Method: Composition-based stats. Identities = 63/315 (20%), Positives = 112/315 (35%), Gaps = 23/315 (7%) Query: 7 TLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTP 66 LDLNLL ++ + SVT+AA R+ +T AVS +L +L A PLFV S G++ T Sbjct: 8 NLDLNLLRVFAVVAEAGSVTEAASRLYLTQPAVSAALRRLTATIGAPLFVRSGRGVALTS 67 Query: 67 LMVSMEQNLAEWM-QMSNLLLD-KPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYP 124 + +L + + L L + +L L + + + P Sbjct: 68 RGERLRASLKPHLGALIEAALAPPAFDPKTCERTLRLGLSDTAEVWLLPPLLRALEREAP 127 Query: 125 QATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 + + + ++ A G VD + + LP + + L Sbjct: 128 RMRVVAVPVQFRTVGAALAGGVDAAIT----------VADDLPSNVCRKRLLKTGFTCLY 177 Query: 185 RKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 H L + + + H+ + + ++++L G+ R I S+ F + Sbjct: 178 DPRHARLRK-LTEAQYFAHDHVIVSYNGDLRGFVEDLL---GKTRRIRCSVASFSNLGAL 233 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 L AT P + + L PLPF+ LLW + Sbjct: 234 IDGTAML--ATVPEIVADDIRAVRPHLRTKPLPFEVQPGY-----MDLLWPAATDDDEAC 286 Query: 305 VWLRETIKNLYASMA 319 + RE I + ++ Sbjct: 287 KFAREKIVQIARPLS 301 >UniRef50_C9QF24 Transcriptional regulators LysR family n=1 Tax=Vibrio orientalis CIP 102891 RepID=C9QF24_VIBOR Length = 305 Score = 201 bits (513), Expect = 2e-50, Method: Composition-based stats. Identities = 71/321 (22%), Positives = 121/321 (37%), Gaps = 21/321 (6%) Query: 1 MKKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPL 60 M K +DLN L +L QER++ AA+R+ + A+S+ L+KLR +FDD LFV P Sbjct: 1 MGKQNGQMDLNALRIFFVLYQERNMRLAAERLFSSQPAMSQHLSKLRTYFDDELFVKVPT 60 Query: 61 GLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPR--GLKFELAAESPLMMIMLNALSKQ 118 GL PT ++ Q+ E + P LA L I+ + K+ Sbjct: 61 GLEPTSFADNLYQSSYELFTQLENSIATSQAFDPSNIEHTVVLAVSPLLAPIIGHQFFKR 120 Query: 119 IYQRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSD 178 I++ P+ I + W +LD + +V +G + + + S I + + D Sbjct: 121 IHELAPKLKILIHQWSKQTLDQLKSDQVQLGINYQ---------IVSEDKQIREKRVLQD 171 Query: 179 VPCVWLRKDHPALHQTWNLDTFLRYPH--ISICWEQSDTWALDNVLQELGRERTIAMSLP 236 +RKDHP + ++ +YP I S + V G + + Sbjct: 172 NFRCLVRKDHPHISTIITMEQAAQYPFTTIIASDWNSQLSYAEQVFAAKGFDVEVLYRSE 231 Query: 237 EFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHK 296 L + D P C + + + F+ + H Sbjct: 232 FPASILDVVQNSD----TIFP--CSQLYRFTNPEVFRS-IEFEGNPDVLKP-SICFYHHY 283 Query: 297 RNSHNPKIVWLRETIKNLYAS 317 +N +P WL E + + + Sbjct: 284 KNDKDPLTQWLIEVLTEVLDT 304 >UniRef50_P0ACQ6 Hydrogen peroxide-inducible genes activator n=273 Tax=cellular organisms RepID=OXYR_ECO57 Length = 305 Score = 201 bits (513), Expect = 2e-50, Method: Composition-based stats. Identities = 39/313 (12%), Positives = 90/313 (28%), Gaps = 21/313 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +++ L L L + R +AA +V+ +S + KL L + + T Sbjct: 1 MNIRDLEYLVALAEHRHFRRAADSCHVSQPTLSGQIRKLEDELGVMLLERTSRKVLFTQA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQ-TPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + ++ +L + Q + + +L + ++Q +P+ Sbjct: 61 GMLLVDQARTVLREVKVLKEMASQQGETMSGPLHIGLIPTVGPYLLPHIIPMLHQTFPKL 120 Query: 127 TIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + L + L + G++D + LF + + + Sbjct: 121 EMYLHEAQTHQLLAQLDSGKLDCVILALVKESEA----------FIEVPLFDEPMLLAIY 170 Query: 186 KDHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 +DHP ++ + + + E G + E M Sbjct: 171 EDHPWANRECVPMADLAGEKLLMLEDGHCLRDQAMGFCFEAGADEDTHFRATSLETLRNM 230 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 A + P + +V LP + + L++ + + Sbjct: 231 VAA--GSGITLLPALAVPPERKRD-GVVYLP-----CIKPEPRRTIGLVYRPGSPLRSRY 282 Query: 305 VWLRETIKNLYAS 317 L E I+ Sbjct: 283 EQLAEAIRARMDG 295 >UniRef50_D0J1D7 Transcriptional regulator, LysR family n=12 Tax=Bacteria RepID=D0J1D7_COMTE Length = 306 Score = 201 bits (513), Expect = 2e-50, Method: Composition-based stats. Identities = 56/317 (17%), Positives = 107/317 (33%), Gaps = 25/317 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 LD+ L + +E V +AA+R++++ S +S+ +A+L LF S + T Sbjct: 2 LDIRQLQYFVAVAEEEHVGRAAERLHISQSPLSRQIAQLEDKLGLVLFERSQQRIRLTRD 61 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQ-TPRGLKFELAAESPLMMI-MLNALSKQIYQRYPQ 125 + + +N L + M +L +++ Q P Sbjct: 62 GRTFLAETRALLTHANRLESLGRRLGRGDEGGLCIGYLEYAMHSGVLPNALRELGQGRPA 121 Query: 126 ATIKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 I L N D L+ + + +DI P ++ + +D + + Sbjct: 122 VHIALYNQQSDAQLEGLRQRSLDIALVCEPPQPD--------DPDLEAAQVLNDPMLLAV 173 Query: 185 RKDHPALHQT-WNLDTFLRYPHISICWEQS--DTWALDNVLQELGRERTIAMSLPEFEQS 241 K HP + + I + ++S L + G TI+M E + Sbjct: 174 PKGHPLAEKQDIEPADLAQQRWIGVKHKESALRHDTLIAACAKAGFTPTISMEATEPLAA 233 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 L + A L + T + ++ + E P WHK N Sbjct: 234 LGLVAA--GLGVTTIQQSLRHQTPEG--------VMLRELSWLTYRTPLWAAWHKINLR- 282 Query: 302 PKIVWLRETIKNLYASM 318 P + R+T+ + + M Sbjct: 283 PLVEEFRKTLVSASSEM 299 >UniRef50_B9JE08 Transcriptional regulator protein n=11 Tax=Rhizobiales RepID=B9JE08_AGRRK Length = 312 Score = 201 bits (513), Expect = 2e-50, Method: Composition-based stats. Identities = 46/309 (14%), Positives = 91/309 (29%), Gaps = 20/309 (6%) Query: 11 NLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVS 70 LL + + +S T+AA+ +++ S+VS + L A LF S GL T + Sbjct: 4 RLLKTFLAVARSKSFTRAAEEVHLAQSSVSDQMQSLEAELGAALFTRSKQGLELTQAGET 63 Query: 71 MEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNALSKQIYQRYPQATIK 129 + E + +++ + A + + L A +P ++ Sbjct: 64 LVSYAEELLALADEARAAVAASAGHEAGSVTIGALETIAAVKLPAWLSAFQNDHPDIGLR 123 Query: 130 L-RNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDH 188 L D L + E+D+ F + L + ++ + Sbjct: 124 LKVAGSGDLLRKLEASEIDLAFCFDQ---------GRLDERFVSRAIATEPLILATSPAV 174 Query: 189 PALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGR-ERTIAMSLPEFEQSLFMAAQ 247 +L ++ + D E G A + + A Sbjct: 175 KFAAGKLDLAELAAMDFLTTEVGCAYRSMFDTAFAEAGIVAPKPAAEVGSIGAIARLVAA 234 Query: 248 PDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWL 307 + PR + LP P V ++W +R P + +L Sbjct: 235 GAGIG--LVPRLAVAEALDRG-EISELPWPGPTQV-----VSLVMIWRRRRVQPPVLRFL 286 Query: 308 RETIKNLYA 316 + +A Sbjct: 287 LAAASDHFA 295 >UniRef50_A6AT33 Transcriptional regulator n=2 Tax=Vibrio harveyi RepID=A6AT33_VIBHA Length = 313 Score = 201 bits (513), Expect = 2e-50, Method: Composition-based stats. Identities = 75/320 (23%), Positives = 135/320 (42%), Gaps = 22/320 (6%) Query: 1 MKKSI-TTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSP 59 M K + + LDLNLL +L QER++ +AA R+ V+ AVSK+L +LR FDD LFV + Sbjct: 1 MAKDLFSNLDLNLLRTFIILHQERNMRRAADRMFVSQPAVSKALQRLRDHFDDELFVKTH 60 Query: 60 LGLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSK 117 GL T + ++LA + ++ L+ P ++A ++ + + + Sbjct: 61 HGLRATEYANDLAESLAPLLDEISITLNGSKDFNPLEMNGTVKIALAPFILSSYASEIFQ 120 Query: 118 QIYQRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFS 177 I Q P I L NW ++D I + EV +G + ++ P + + + Sbjct: 121 AIRQAAPNVQIHLLNWSRSTMDEIIKDEVLLGVNYE---------INHSPKELLTKEIVK 171 Query: 178 DVPCVWLRKDHPALHQTWNLDTFLRYPHISI--CWEQSDTWALDNVLQELGRERTIAMSL 235 D C ++RKDHP + ++ S+ + +++ G E IA Sbjct: 172 DAFCAYVRKDHPLQGDRLRVSDCQHLEFATVIAADWNSNISFSEKIMKIKGVEPKIAFRS 231 Query: 236 PEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWH 295 + + A D + A+ ++L +L + E + +E +H Sbjct: 232 ELPSAIIDVVANSDMVFPASKTVNVDKLHKLRRLDI--------ELEGMVIEPSLLAYYH 283 Query: 296 KRNSHNPKIVWLRETIKNLY 315 +N N + WLR + + Sbjct: 284 HKNRRNDMVHWLRNIVTEII 303 >UniRef50_UPI0001B58B0A LysR family transcriptional regulator n=1 Tax=Streptomyces sp. AA4 RepID=UPI0001B58B0A Length = 301 Score = 201 bits (513), Expect = 2e-50, Method: Composition-based stats. Identities = 51/315 (16%), Positives = 95/315 (30%), Gaps = 25/315 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++ L + +E S T+AA+R+ T S VS ++ L LF S ++ + Sbjct: 1 METRQLEHFVAVAEELSFTRAAQRLFATQSTVSATIRALETDLGATLFDRSTRRVALSTA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQ-TPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 ++ + + + + L L ++R+P Sbjct: 61 GELFLPEAKAALEAVERAREVVQQASAGLRGSLRIGTLTSMNAFDLPVLLGAFHRRHPLV 120 Query: 127 TIKLR---NWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVW 183 + L D + G +D+ G +D L S Sbjct: 121 DLHLTVSLTGSSGLADDVRHGRLDVALLGLSRAELG---------GLDATQLASVPYYAV 171 Query: 184 LRKDHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 L HP + L + + A+D LG R +A+ + + Sbjct: 172 LPDSHPLAEQASVRLPELDGELFVDCPRGFGNRIAVDREFAALGLSRRVAVEVADMRTVP 231 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 A L +A P +L +V +PL L P T++ + + Sbjct: 232 RYVAA--GLGVAVLPGTA----RLDLPGVVPIPLA-----DTSLTWPLTVVVSAKRPPSQ 280 Query: 303 KIVWLRETIKNLYAS 317 + L+E A Sbjct: 281 ALRTLQELFVAAAAE 295 >UniRef50_C8X9S9 Transcriptional regulator, LysR family n=5 Tax=Actinomycetales RepID=C8X9S9_NAKMY Length = 298 Score = 201 bits (513), Expect = 2e-50, Method: Composition-based stats. Identities = 46/297 (15%), Positives = 89/297 (29%), Gaps = 25/297 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +++ L + +E +AA R+ + S +S+++ KL LF S ++ TP Sbjct: 1 MEIRQLEAFVAVAEELHFGRAAARLRLAQSPLSQTIRKLERELGVTLFDRSTRSVALTPA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNALSKQIYQRYPQA 126 ++ + + L + + L L L++ + +RYPQ Sbjct: 61 GAALLPHAHRVFEELELGRQATRAVSGAVYGTVTVGFSGALNHRTLPPLTRAVRRRYPQV 120 Query: 127 TIKLRN--WDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 T+ L D + I RG +D+ F + ++ + V L Sbjct: 121 TLNLVAGMLTRDGVLQIERGSLDLCFVALPLDASPA---------VRSRLIAREPLGVAL 171 Query: 185 RKDHPALHQT-WNLDTFLRYPHISIC--WEQSDTWALDNVLQELGRERTIAMSLPEFEQS 241 DHP +L I+ A G + + + Sbjct: 172 PIDHPLAEDPEVDLADLADEDFITTPAASGSGLREAGVRACIGAGFRPRVVQEITDPFMI 231 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRN 298 L + A + +A + F + + L W N Sbjct: 232 LTLVAA--GVGVALISDGVAQIMPSGSV--------FVPLRGAPTYLDHALAWSADN 278 >UniRef50_D2S9A0 Transcriptional regulator, LysR family n=1 Tax=Geodermatophilus obscurus DSM 43160 RepID=D2S9A0_9ACTO Length = 304 Score = 201 bits (513), Expect = 3e-50, Method: Composition-based stats. Identities = 43/314 (13%), Positives = 106/314 (33%), Gaps = 26/314 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L + +E +AA+R+++ A+S+ + +L L + + T Sbjct: 1 MELRHLRAFTAVAEELHFGRAARRLHLAQPALSQQVKQLEQDVGAVLLERTTRQVRLTSA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPH-HQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 ++ ++ + L + + + + + +L +++ +RYP Sbjct: 61 GTVFLEHAHRVLREAELARESVLVTERGERGELRVGVTGVITWRLLPRMARAYRRRYPHV 120 Query: 127 TIKLRN--WDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 ++LR + + A+ G +D+GF + V+ ++ L Sbjct: 121 RLELRPSVFSAAQVSALIDGRIDVGFLRAPVPAGP----------LASRVILNESLMAVL 170 Query: 185 RKDHPALHQT-WNLDTFLRYPHISI--CWEQSDTWALDNVLQELGRERTIAMSLPEFEQS 241 +DHP + +L +S + A + G + P+ Sbjct: 171 PQDHPLAGEPEVHLADLADENFVSYVSMQGSALRDAAVHACFSAGFTPRVVQEAPDTHTV 230 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 + + + +A P + +V P+ + VP L W + + + Sbjct: 231 VALV--GAAVGVALMPASAETLQIEG---VVFTPIA----GGVDVRVPIALAWRE-SDSS 280 Query: 302 PKIVWLRETIKNLY 315 P + T + + Sbjct: 281 PVLAGFLATAEEVL 294 >UniRef50_C1BAS4 Putative LysR family transcriptional regulator n=2 Tax=Actinomycetales RepID=C1BAS4_RHOOB Length = 299 Score = 201 bits (513), Expect = 3e-50, Method: Composition-based stats. Identities = 42/312 (13%), Positives = 92/312 (29%), Gaps = 25/312 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L + +E + +AA+R+++ A+S+ ++K LF + + T Sbjct: 1 MELRQLRYFVTVAEEMNFRRAAERLHIAQPALSQQISKFEKELRTTLFERTTRRVELTDA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + ++ L + S + ++ A + + +P Sbjct: 61 GRVLLDEGRRVLAEADHALAAVEQVAHGEVGLLRIGFVSSAALRIVPATVLALQKEWPGV 120 Query: 127 TIKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 ++L D L AI G +DIG I L + V + Sbjct: 121 QVELSESTTDRQLSAIADGILDIGLVREVDRAE----------GIVVRPLTREPLLVAMH 170 Query: 186 KDHPALHQ-TWNLDTFLRYPHISICWE--QSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 HP + + L ++ + + G A +F L Sbjct: 171 SSHPFAGRASVRLVELRDERFLTFPRGQVSRLYDHIAALCHHAGFRLEAAQEAVQFPTLL 230 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 + A + + A + L + L + ++ + P Sbjct: 231 GLVAANTGVTVVPASLRALHLPDLRYVAL----------SDAQAVSTVSVAYRADRQQIP 280 Query: 303 KIVWLRETIKNL 314 I + +L Sbjct: 281 AIRHFLDVASSL 292 >UniRef50_C6DBU7 Transcriptional regulator, LysR family n=4 Tax=Pectobacterium RepID=C6DBU7_PECCP Length = 299 Score = 201 bits (513), Expect = 3e-50, Method: Composition-based stats. Identities = 47/318 (14%), Positives = 103/318 (32%), Gaps = 30/318 (9%) Query: 7 TLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTP 66 L + L L + + T+AA++IN++ A S +A L LF + Sbjct: 2 NLSIKQLRAFIALTETDNFTRAAQKINLSQPAFSSLIAGLEEEVGYRLFDRDTRKVQLNA 61 Query: 67 LMVSMEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQIYQRYPQ 125 + +Q + + + K LA + + L + Q ++ YP+ Sbjct: 62 DGLHFIDIARRLVQTHDDAVGEIKSYATGYKGKIVLAVLPSMAVEWLPQVLAQYHRAYPK 121 Query: 126 ATIKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 ++L + +D L A+ G D+ + + P +LF+D + Sbjct: 122 IKVELLDTQWDRCLKAVLDGRADLALTAGQP----------SPGTFSSRMLFADSFYLIC 171 Query: 185 RKDHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 + HP + ++ +YP + C S D +++ G + + + + Sbjct: 172 QNSHPLAQRDSVDVTDVAQYPFVGFCKGTSIRQYTDQLIEPEGF--NYVLEVRQLTTMMG 229 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVAL---PLPFDESQQKKLEVPFTLLWHKRNSH 300 + A + + T L L + + L+ L+ + Sbjct: 230 LVAANYGVSIVT------------GLTLFQFQHKDIAIIPFRDLSLQRGIYLVTDRERQL 277 Query: 301 NPKIVWLRETIKNLYASM 318 + + + S Sbjct: 278 SVCAKEFYDFLLERAESF 295 >UniRef50_C8NJC1 LysR family transcriptional regulator n=9 Tax=Corynebacterium RepID=C8NJC1_COREF Length = 298 Score = 201 bits (512), Expect = 3e-50, Method: Composition-based stats. Identities = 35/309 (11%), Positives = 89/309 (28%), Gaps = 22/309 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 + ++ L + + +T+ A R+ + +S+ +A++ PLF + L P Sbjct: 1 MRIDDLRLFIEVAESGHLTETADRLGIAQPTLSRRMARVEKHVGTPLFERAGRRLHLNPR 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQ-TPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + ++ + + P L L M+ L + +P+ Sbjct: 61 GQAFLPHARRITAELDMAVTQVKRLMDPELGTIRLDFMHSLGTWMVPELIRTFRTDHPRV 120 Query: 127 TIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 +L + + + D+ G + + + + L + + Sbjct: 121 EFELHQGPANELVARVLDDAADLALVGPRP--------AEVDAGLGWAPLLRQRLALAVP 172 Query: 186 KDHPALHQ-TWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 + H + L P +++ LD + G I E + Sbjct: 173 EGHRLDGEGPVELREAAGEPFVAMLPGFGTRLLLDALATASGITPDIVFESMELTTVSGL 232 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 + + + + + L L + L+W + P + Sbjct: 233 VSAGLGVGVLP---MGDPHLPTVGVKLRPL--------EPATHRELGLVWRADSGPAPAV 281 Query: 305 VWLRETIKN 313 R+ + Sbjct: 282 EVFRDFVAR 290 >UniRef50_Q7WJM8 Probable LysR-family transcriptional regulator n=2 Tax=Bordetella RepID=Q7WJM8_BORBR Length = 323 Score = 201 bits (512), Expect = 3e-50, Method: Composition-based stats. Identities = 48/300 (16%), Positives = 100/300 (33%), Gaps = 21/300 (7%) Query: 20 MQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSMEQNLAEWM 79 + ++T+ A ++ A+SK L L A LFV P G++PT ++ + + Sbjct: 41 CETGNLTEVANEYGISQPALSKWLKDLEADIGQRLFVREPRGVTPTACARELQAHARAII 100 Query: 80 QMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQIYQRYPQATIKLRNWDYD-S 137 H + + ++L ++ YP + + D Sbjct: 101 GRLERARTAVDHIASGFAGHLSVGFSPVVGPVVLPESIRRFRAAYPDVLVSVIEASIDLL 160 Query: 138 LDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPAL-HQTWN 196 L + G+ DI E ++P + E L+ + C+ + HP + + Sbjct: 161 LPGLRNGDFDIVVGRLEEV--------AMPEDVRCETLYDEPVCLVAGRAHPLAGRRRIS 212 Query: 197 LDTFLRYPHISICWEQSDTWALDNVLQELGRE-RTIAMSLPEFEQSLFMAAQPDNLLLAT 255 + YP IS L+ L G+ A+ + ++ + + D + Sbjct: 213 WEDAQAYPWISPQQGTPLRMRLEMELAVAGQPLPRHAVESTSVQTNVALLDRSDMIAP-M 271 Query: 256 APRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWLRETIKNLY 315 + R +++ + L ++ L L P +LW H ++ Sbjct: 272 SRRLAEHFQRQGVLRILPLTL--------GSGGPIGMLWRADGVHGTHTAHFIACLRQAV 323 >UniRef50_Q47V66 Substrate-binding transcriptional regulator, LysR family n=2 Tax=Gammaproteobacteria RepID=Q47V66_COLP3 Length = 293 Score = 201 bits (512), Expect = 3e-50, Method: Composition-based stats. Identities = 44/315 (13%), Positives = 96/315 (30%), Gaps = 25/315 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L L + T+AA +I + A++ ++ KL L + T Sbjct: 1 MNLKRLEYFCQLAVLGNFTRAAHKIGIAQPALTIAIQKLEQEVGLKLINRAEKNALLTAE 60 Query: 68 MVSMEQNLAEWMQMS-NLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + + + + L L+ + + + + Q+YP+ Sbjct: 61 GEVLYKLATQLLSQAKQLELELEELKDLEQGTIRFGVSAMMGSYYFPKVLATFKQKYPKI 120 Query: 127 TIKLRNWDYDSLD-AITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + L + +L+ + GE+D+ +S + Y LF++ + Sbjct: 121 KMHLVDQGTAALEKMLLNGELDLALVRSDSENPQ----------LRYTELFNEEVVAAMA 170 Query: 186 KDHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 HP Q+ +L F + P + + ++ I M E + Sbjct: 171 SSHPLANEQSISLAQFCQQPLVLFHEGYFLREVISQYSKKNHLALDIRMETNLIELQKSL 230 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 + R Q Q+ + K+E +L W K + + Sbjct: 231 VRSEVGI-TTCLSRILQNEQQMT-----------STPFEPKIEFKLSLAWKKNHYLSKAS 278 Query: 305 VWLRETIKNLYASMA 319 + + M Sbjct: 279 KAFMTHLSSTLDPMG 293 >UniRef50_C9KJW7 Transcriptional regulator, LysR family n=2 Tax=Veillonellaceae RepID=C9KJW7_9FIRM Length = 304 Score = 201 bits (512), Expect = 3e-50, Method: Composition-based stats. Identities = 41/314 (13%), Positives = 96/314 (30%), Gaps = 26/314 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++ L + + + T+ AK ++V+ +V+K++ L A L S ++ T Sbjct: 1 MEFRQLEYFCTISELENFTRTAKVLHVSQPSVTKAIKALEAELGLTLIDRSQKHVTLTEA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQ-TPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + MQ + L + K+ +++P Sbjct: 61 GRAFLIHARRIMQDAELAKQDMMRFCVGSAGTIHFGVPPMFEAYLFPTFFKEFREKFPTT 120 Query: 127 TIKLRNW--DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 + ++ + + + + G++D G P V+ D + L Sbjct: 121 LLDVQEFGDSDEVRERVEIGDLDFGVIFGSPETT-------FPHEF---VIMHDAMSLCL 170 Query: 185 RKDHPA-LHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 + HP + + ++ R I A+ E G + ++ + + Sbjct: 171 PEGHPLSVKKEVAFESLRRERFILQQPRTYQYRAIFARCIEAGFTPDVMLTTSQLKTIKQ 230 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 + A + ++ P + + V PL + L W +P Sbjct: 231 LVA--NGTGISILPDFVLREEKSF----VRRPLAPRLMSRT------ALYWSAHKVFSPL 278 Query: 304 IVWLRETIKNLYAS 317 +K A+ Sbjct: 279 DRDFLTFMKQYVAA 292 >UniRef50_C1DMS0 Transcriptional regulator, LysR family n=1 Tax=Azotobacter vinelandii DJ RepID=C1DMS0_AZOVD Length = 307 Score = 201 bits (512), Expect = 3e-50, Method: Composition-based stats. Identities = 48/314 (15%), Positives = 106/314 (33%), Gaps = 25/314 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +++ L + +E + +AA+R+ +T A+S+ + +L L + ++ T Sbjct: 1 MEIRQLKYFVAVAEELNFNRAAERLYITQPALSRQIQQLEEAIPAVLLERNSKRVALTDA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQT-PRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + D+ + + ++ + + + + +P Sbjct: 61 GQAFYHQALNILAQLQRAADESRLLAEGKKGSLVIGIFGSSILDFIPRVLLEFGRTHPAV 120 Query: 127 TIKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 I L D D + A+ + IGF+ I+ E++ + + L Sbjct: 121 EISLHPMDKDAQIQALRERRLTIGFNRLVPGEP----------DIEQELVRREALMLALP 170 Query: 186 KDHPA-LHQTWNLDTFLRYPHISICWE--QSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 HP L L+ P I + T + + + +A + + S+ Sbjct: 171 AKHPLAARDAIELGEVLQEPFILYPRGVRRGLTTHVRRLFADYDALPRVAQEVTDVTTSI 230 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 + A L L PR +L + AL + K E+ L+ K +P Sbjct: 231 ALVAG--GLGLCVVPRSAVNL-RLPGVEYRAL------RCRGKAEIELACLYRKG-DGSP 280 Query: 303 KIVWLRETIKNLYA 316 + T++ L + Sbjct: 281 LLRAFLATVRQLAS 294 >UniRef50_Q12BP5 Transcriptional regulator, LysR family n=1 Tax=Polaromonas sp. JS666 RepID=Q12BP5_POLSJ Length = 319 Score = 201 bits (512), Expect = 3e-50, Method: Composition-based stats. Identities = 50/331 (15%), Positives = 102/331 (30%), Gaps = 34/331 (10%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L + +L E S T+AA+R++V+ +S +A L A LF + ++ + Sbjct: 1 MELRQIRYFTVLADELSFTRAARRLHVSQPPLSFQIASLEAELGARLFNRTSRSVALSEA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQT-PRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + + + ++ + +Q + P Sbjct: 61 GKAFLPHAQAVLARLEEARGHVQRVASGLQGRVQVGLAGSHFLGPFPQFIQQFRLQRPAV 120 Query: 127 TIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 I L D L A+ G +D+ S I +L+ D V L Sbjct: 121 EIALHEMKPSDHLQALRDGRLDLCVSRNPLEDAQ----------ISAALLWRDPVVVALP 170 Query: 186 KDHPALHQ-TWNLDTFLRYPHISICWEQS-DTWALDNVLQELGRERTIAMSLPEFEQSLF 243 H + L + + + S L + G IA + E +L Sbjct: 171 PGHRLAARSRLRLAELKDEEFVFLRLDSSPFAARLFEACVQAGFAPHIAQQVVEVPAALN 230 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEV--------------- 288 + A L +A P + + + +L + Q + + Sbjct: 231 LVAA--GLGVALVPASLAQL-RADAVGICSLSPSMPKRAQAEGKAKMTGGLNGNAPGAIN 287 Query: 289 -PFTLLWHKRNSHNPKIVWLRETIKNLYASM 318 +LW +R P + R + + ++ Sbjct: 288 GDVYVLW-RREDAAPAVATFRTQLLDWARAL 317 >UniRef50_B1M8N3 Transcriptional regulator, LysR family n=35 Tax=Proteobacteria RepID=B1M8N3_METRJ Length = 332 Score = 201 bits (512), Expect = 3e-50, Method: Composition-based stats. Identities = 41/314 (13%), Positives = 93/314 (29%), Gaps = 20/314 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +D+ L L + + SV+KAA R+N+ A+S+ + +L LF G+ T Sbjct: 12 MDIAQLRTLIHVAELGSVSKAADRLNIAQPALSRQIRQLEQELGTDLFERHGRGMVITET 71 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 ++ + + M + D + + I+ L + + +P Sbjct: 72 GRAVLVHASRVMAEMEAIRDTVASGRTSFRGTVSVGTTPTVAEIVTVPLVTALRRTHPDL 131 Query: 127 TIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 ++L LD + RG++D+ S + + + + + Sbjct: 132 AVRLSAAYSGHILDWLQRGQIDVAVSYNPRRLHT----------LRIVPIMIETLLLVGP 181 Query: 186 KDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMA 245 + + + G E + + F+ + + Sbjct: 182 GGREEPGAPVPFAGLAGMDLVLPSPGHMLRDIAHDCARRAGIELRVVVEADSFQSLINLV 241 Query: 246 AQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIV 305 + P + + L A PL + + + Sbjct: 242 RA--GIGATVLP-LAPVHAMVAAGDLTAAPL-----TDPSPTRELVVAYPADRPVSRAAR 293 Query: 306 WLRETIKNLYASMA 319 + ET+ + A +A Sbjct: 294 LVGETVIGIAADLA 307 >UniRef50_A0RKW5 Transcriptional regulator, LysR family n=81 Tax=Bacillus RepID=A0RKW5_BACAH Length = 306 Score = 201 bits (512), Expect = 3e-50, Method: Composition-based stats. Identities = 40/312 (12%), Positives = 99/312 (31%), Gaps = 21/312 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +++++L +++++ ++AA+ +N++ VS + L F L SP + T Sbjct: 10 MNVDILKIFVTVVEQKHFSRAAELLNLSQPGVSMHIRNLENEFGTTLIQRSPKHVQVTEA 69 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTP-RGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + + + + K + + A + +L + P Sbjct: 70 GNILYIHAKQMLSLYEDAKQKINELHNVVTGTLRIGASFTIGEYLLPKILANYANENPHV 129 Query: 127 TIK-LRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + + D L ++ ++DIG + +D E D + + Sbjct: 130 EVHTFISNTEDVLQSLRSNQIDIGLVEGQVVYA----------DVDVETFMQDEMKLVVP 179 Query: 186 KDHPALHQ-TWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 +HP L N T + D + + + + + Sbjct: 180 PNHPLLRTNEMNESTLQDQVWVLRESGSGTRAYSDRFIHQHHLKMKRFFTFSSIQSVKEA 239 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 + L +A + +L L + +P ++L PF+++ K + I Sbjct: 240 VSA--GLGIAILSDWTVR-KELLAKELFHVEVP-----NEQLIRPFSIVRGKYFIPSKAI 291 Query: 305 VWLRETIKNLYA 316 + + Sbjct: 292 QVFLNHVNSFAK 303 >UniRef50_Q1ZB78 Transcriptional regulator, LysR family protein n=1 Tax=Photobacterium profundum 3TCK RepID=Q1ZB78_PHOPR Length = 305 Score = 201 bits (512), Expect = 3e-50, Method: Composition-based stats. Identities = 59/321 (18%), Positives = 119/321 (37%), Gaps = 22/321 (6%) Query: 1 MKKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPL 60 M ++ DLNLL + S TKAA+ +++T S+VS ++ +L+ + LF+ + Sbjct: 1 MSQN-KHFDLNLLRVFLSVYNTCSFTKAAEELDLTQSSVSNAILRLKKTVGEELFIRAGR 59 Query: 61 GLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPR--GLKFELAAESPLMMIMLNALSKQ 118 G+ PT + + L M ++ P +F + A ++ I+ L K Sbjct: 60 GIQPTAVANQLYHQLENSMLKVEQTVNSFEQFDPLHTAREFHVYAIESVIHILQPRLDKY 119 Query: 119 IYQRYPQATIKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFS 177 + P + D + ++D+ + S + E + S Sbjct: 120 LKDYAPTIIFHELPAQEQQMYDQLQAEQIDVVLDIVQPDVVS----------LSSEAILS 169 Query: 178 DVPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPE 237 + C + + HP +++ + + FL H+ + + D E R + Sbjct: 170 EKMCCVVSRHHPRINEVLSKEQFLEESHVFFNMRRFNLTIADYFTYERLPYRKMYCEHSS 229 Query: 238 FEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKR 297 L A+ + + +A + + +L L+ P K + ++W R Sbjct: 230 LMSMLATTARSEAISMA-PYSLAKQCEGMFELRLIDSP-------YKTKPINIFMVWPSR 281 Query: 298 NSHNPKIVWLRETIKNLYASM 318 +N WLRE I + + Sbjct: 282 LKNNTSHTWLREAILTVSKEL 302 >UniRef50_Q0JZR1 Transcriptional regulator, LysR-family n=8 Tax=Proteobacteria RepID=Q0JZR1_RALEH Length = 311 Score = 201 bits (512), Expect = 3e-50, Method: Composition-based stats. Identities = 54/315 (17%), Positives = 99/315 (31%), Gaps = 19/315 (6%) Query: 6 TTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPT 65 + L + + AA +V+ SA++ ++ L LF P G++ T Sbjct: 13 KEVTLRQFRYFVAAAETGQFSMAATAEHVSQSAITNAVLALEQRLAVRLFERRPHGVTLT 72 Query: 66 PLMVSMEQNLAEWMQMSNLLLDKPH-HQTPRGLKFELAAESPLMMIMLNALSKQIYQRYP 124 Q+ + + L +P LAA ++ L L + YP Sbjct: 73 AEGHLFFQHARQILDSVEDALREPRFQVHGLQGSVRLAASYTVLGYFLPGLLARFRTNYP 132 Query: 125 QATIKLRNWD-YDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVW 183 + L + D D A+ GE+++G + + R P L +W Sbjct: 133 DIELDLLDMDRPDIERAVLAGEIELGIALLSNLER--------PQRFQRHTLMRSRRQLW 184 Query: 184 LRKDHPALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 HP L + +L YP+I I ++++ L + +A E Sbjct: 185 TSSSHPLLAVERPSLRDIAAYPYILITVDEAEESTL-RYWRSHRLAPKVAFRTGSMEALR 243 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 + A + L + A P+ ++ +LW Sbjct: 244 GLVAH--GFGVTVLSDMVYRPWSLEGKQIEARPIA-----NAVPDMEVGMLWQPGRKLGK 296 Query: 303 KIVWLRETIKNLYAS 317 LRE + + S Sbjct: 297 PADALREFLIHACGS 311 >UniRef50_Q9RYH7 Transcriptional regulator, HTH_1 family n=2 Tax=Bacteria RepID=Q9RYH7_DEIRA Length = 316 Score = 200 bits (511), Expect = 4e-50, Method: Composition-based stats. Identities = 42/288 (14%), Positives = 88/288 (30%), Gaps = 18/288 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L + ER+VT+AA R+ + +S+ + +L PLF P G+ T Sbjct: 17 MELRHLRYFLAVADERNVTRAAARLGIQQPPLSQQIRELEREIGTPLFHRVPRGVELTEA 76 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQ-TPRGLKFELAAESPLM-MIMLNALSKQIYQRYPQ 125 + + + + + + + L ++ YP Sbjct: 77 GHTFLRLVQSIPAQVEGATHEARRAGRGETGELRVGFTGAASINPQVQGLLRRYRDLYPD 136 Query: 126 ATIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 + L + LD + ++D + L + ++ + + Sbjct: 137 VRLTLTEKNTVTLLDELRSHQLDAVLARP---------LPQHLGDLTLTLVAREPMVAVV 187 Query: 185 RKDHPALH-QTWNLDTFLRYPHISICWEQS--DTWALDNVLQELGRERTIAMSLPEFEQS 241 + HPA + L+ I+ E + + G E + P+ Sbjct: 188 PRGHPAAQTRPLPLERLRDETFITTPREFGPLIYDTVWQACRAAGFEPRLGQLAPQMLSI 247 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVP 289 + + A L ++ P + L + L P L P Sbjct: 248 VSLVAA--GLGVSLVPDAMRRL-NLEGCEYLELRPPVPTVDLTLLCRP 292 >UniRef50_Q7W5S7 LysR-family transcriptional regulator n=3 Tax=Bordetella RepID=Q7W5S7_BORPA Length = 315 Score = 200 bits (511), Expect = 4e-50, Method: Composition-based stats. Identities = 46/314 (14%), Positives = 98/314 (31%), Gaps = 29/314 (9%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L +L + +AA R+ + +S+ + L LF G+S T Sbjct: 16 MELRHLRYFLMLAETLHFGRAASRLGIAQPPLSRQIRDLEEQVGATLFYRGTRGVSLTDA 75 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQ-TPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 V+ Q A+ + ++ + + R + + L +L + Q++P Sbjct: 76 GVAFAQRAAQIVAAADEAVFEAREAGQGRTGRIVIGFVHSLAYSLLPRVLPGFRQKHPGI 135 Query: 127 TIKLRNWD-YDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + LR D A+ G++D G I +F + + L Sbjct: 136 AVSLREVTVADKESALLSGQIDTGIYRPTVR----------HPEIATLPIFEEGFVLALP 185 Query: 186 KDHPALH-QTWNLDTFLRYPHISICW---EQSDTWALDNVLQELGRERTIAMSLPEFEQS 241 HP + ++ + P I + + L+ + Sbjct: 186 SGHPLARKRRVSVHSLRDQPLILFRALRGDVGLHGTIAAFLRAHDVPVKACEEVGTIHVG 245 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHK---RN 298 + + + + P + + +V P + V T+ W Sbjct: 246 MGLVLA--GVGVCIIPETSRMVHIEG---VVTRPFA-----EATTRVSSTVCWRHQDSSR 295 Query: 299 SHNPKIVWLRETIK 312 S + + +RE I+ Sbjct: 296 SLDAWVRHVRELIR 309 >UniRef50_B9Z0M9 Transcriptional regulator, LysR family n=2 Tax=Betaproteobacteria RepID=B9Z0M9_9NEIS Length = 316 Score = 200 bits (511), Expect = 4e-50, Method: Composition-based stats. Identities = 42/281 (14%), Positives = 85/281 (30%), Gaps = 16/281 (5%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +D+ L L + + SVT+AA+ ++V AVS+ L L LF G+ T Sbjct: 1 MDIKQLRALIAVAETGSVTRAAEMLHVVQPAVSRQLRLLEEDIGAALFERGRYGMELTEQ 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPH-HQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + ++ + + + ++ + L + YP Sbjct: 61 GEILAEYTRRALRELDRARAEIQPTSATIQGIVTIGLLPSTADLLASPLLTTVSSLYPGV 120 Query: 127 TIKL-RNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 +++ + + + GEVD ++ L + V Sbjct: 121 RLRISIGFAGHLQNWLESGEVDAALLYDPKPSPM----------LNVSPLLEENLWVVGP 170 Query: 186 K-DHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 + A + +L P I + +++ +E + + + Sbjct: 171 ASSNFAAERPVSLAELAGVPLILPSAPHALRTLVEHAFALAKQEVKVVVETNAMSVQRNL 230 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKK 285 L P + L L A PL E Q+K Sbjct: 231 VLAGHGL--TILPSIAVADDIARGL-LKAAPLTSPELQRKI 268 >UniRef50_Q0RXH6 Transcriptional regulator, LysR family protein n=1 Tax=Rhodococcus jostii RHA1 RepID=Q0RXH6_RHOSR Length = 290 Score = 200 bits (511), Expect = 4e-50, Method: Composition-based stats. Identities = 44/308 (14%), Positives = 94/308 (30%), Gaps = 24/308 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +++ L + + +AAK +N+ +S+ + +L LF S ++ T Sbjct: 1 MEIRHLKYFLAVAEHLHYGRAAKSLNMAQPPLSQQIRRLEKILQMELFDRSSRRVTLTNE 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQT-PRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + E + S+ + + + + M L +Q YP+A Sbjct: 61 GQFLLEAAREVVGQSDHFENLAKALRMGEAGQLRIGFAASAMNWGLGTKLRQFRTAYPEA 120 Query: 127 TIKLRNWD-YDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + D A+ +D+ F+ + + L + + Sbjct: 121 DVIAHQMSVADQATALQDDRIDLAFTVGGLNYE----------NLQVVDLDEEPLRAVIP 170 Query: 186 KDHPALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 DHP +T L + ++ + + G I+ + L M Sbjct: 171 SDHPLAGMETVRLADLSHETFVGYRFDDHLEDIIASACYRAGFTPKISFQGAQSHTLLHM 230 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 + L L A C + + L P + +++ H R P Sbjct: 231 VSAGFGLGLLPA---CDARMGADGVVFIDLEPPVPTMR-------ISVVRHWRR-LTPLA 279 Query: 305 VWLRETIK 312 + E +K Sbjct: 280 ERMLELVK 287 >UniRef50_A0R264 Transcriptional regulator, LysR family protein n=1 Tax=Mycobacterium smegmatis str. MC2 155 RepID=A0R264_MYCS2 Length = 301 Score = 200 bits (511), Expect = 4e-50, Method: Composition-based stats. Identities = 56/298 (18%), Positives = 104/298 (34%), Gaps = 20/298 (6%) Query: 22 ERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSMEQNLAEWMQM 81 ERSV AA+R++ + A+S++LA+LR DDP+ V + + PTP ++++ + + +Q Sbjct: 19 ERSVGGAAERLHTSAPAMSRTLARLRRVLDDPVLVRAGREMVPTPRALALQGRVHDVVQQ 78 Query: 82 SNLLLDKPHHQT--PRGLKFELAAESPLMMIMLNALSKQIYQRYPQATIKLRNWDYDSLD 139 + + P F + L L +++ T+K ++ Sbjct: 79 ARAVFTPPEVPDLPNLRRTFSVQLGDGLFSHCGPRLLARVHAEALNVTLKFVGESHEDTH 138 Query: 140 AITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPALHQTWNLDT 199 ++ G VDI + E L + R H + L Sbjct: 139 SLREGSVDIEIG----------QVRRTEPETIIEPLVEENWVGVARAGHELTGKRVTLKR 188 Query: 200 FLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQPDNLLLATAPRY 259 F H+ +D++L E G R + P LF+ D + + Sbjct: 189 FADAEHVVFSRRGRLRGPVDDLLAEHGLRRRVVACAPSPAGGLFLIQNSDLVGM-LPAGI 247 Query: 260 CQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWLRETIKNLYAS 317 L +PL + + WH R + WLR+ +++ Sbjct: 248 GAQAIATFALQTFTIPLELP-------PLVIGMAWHPRFDADGAHRWLRDCVRSAVRG 298 >UniRef50_UPI000174499E transcriptional regulatory protein, LysR family n=1 Tax=Verrucomicrobium spinosum DSM 4136 RepID=UPI000174499E Length = 302 Score = 200 bits (511), Expect = 4e-50, Method: Composition-based stats. Identities = 48/319 (15%), Positives = 96/319 (30%), Gaps = 20/319 (6%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 LD L +L +E S T+A + +++T SA+S ++ L LF + Sbjct: 1 MDSPLLDSRQLRAFTVLAREGSFTQAGRALHLTQSAISHAIRALEEDLGCMLFHRQGKRV 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQIYQ 121 T + ++ E + L + + + +L + ++ Sbjct: 61 LLTHHGRELLRHAEEIQRQMALARASLGALDQNPRGQIRIGSTPAASQFILPTVLREFKD 120 Query: 122 RYPQATIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 +P +I + D+L + +G +D+ R +D LF D Sbjct: 121 SFPLYSISIVPGETPDTLQRLEQGVLDLAVCLRPRDVA----------RVDCRPLFEDEL 170 Query: 181 CVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQ 240 HP Q +I S + +LG + L E Sbjct: 171 IFLASPLHPWAQQHPKTKDLAGETYIISSRNSSTFEMIGEYFLKLGVRPKSFIELGNTEA 230 Query: 241 SLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 + L +A + LV+LPL +++ + K+ Sbjct: 231 IKELVK--LGLGVAMVAAWTAPAEIKSG-ELVSLPLVRSRIKRQWVVAHM-----KQKPV 282 Query: 301 NPKIVWLRETIKNLYASMA 319 + + + +A Sbjct: 283 SLAEQTFMTLCEQVGEQLA 301 >UniRef50_B8CHD0 Regulatory protein, LysR:LysR, substrate-binding n=74 Tax=Gammaproteobacteria RepID=B8CHD0_SHEPW Length = 336 Score = 200 bits (511), Expect = 4e-50, Method: Composition-based stats. Identities = 70/316 (22%), Positives = 135/316 (42%), Gaps = 15/316 (4%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 ++ + + L+ L +++ +SVT +AKR+ ++PS+VSK+L++LR DD LF L Sbjct: 28 LSRISMKHLITLHVMLDTQSVTASAKRLCLSPSSVSKTLSQLRQSLDDDLFYRHGNKLVA 87 Query: 65 TPLMVSMEQNLAEWMQMSNLLL-DKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRY 123 TPL + N+ + + NLL+ + +F LA + L+ + Q+ Sbjct: 88 TPLARRLGPNVHQIIHDMNLLITQEEFSPAEYEGRFSLAMRESTFELFAAKLTANVLQQA 147 Query: 124 PQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVW 183 P + + D + I +G +D + + +E L D Sbjct: 148 PNIKLDVYAKDSIGFEGIVKGNLDFILLPHDRSQP-----PISQPDLVWETLIRDEMVCL 202 Query: 184 LRKDHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 + HP + ++D +L Y HI I + + L++ R +S+ +F + Sbjct: 203 MNACHPLAVKRMISIDDYLNYSHIGISDNDLNRPFFELKLEQQALNRATPLSVADFGSAA 262 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 M + LL + + + Q L + LP + EV ++L+WHK++ ++P Sbjct: 263 LMCHHSE-LLFTCSRHWAENALQARGLVIKELPFDY-------GEVAYSLVWHKQSMNDP 314 Query: 303 KIVWLRETIKNLYASM 318 W +K + A + Sbjct: 315 AHRWFYGRLKKVTAEL 330 >UniRef50_UPI0001C3125C transcriptional regulator, LysR family n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C3125C Length = 315 Score = 200 bits (511), Expect = 4e-50, Method: Composition-based stats. Identities = 39/317 (12%), Positives = 95/317 (29%), Gaps = 21/317 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +D+ L L+ + S + AA + +T SAVS+ +A L L + T Sbjct: 2 IDVRRLRVLREVAVHGSFSAAAHALTLTQSAVSQHVATLEREVGQRLVERGTRPVELTEA 61 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNALSKQIYQRYPQA 126 ++ ++ + + R + + ++ ++ + +P Sbjct: 62 GYALTRHATGIFARLDDAEQELAEIAGRRHGRLRFGTFPTALATLMPPAFERFGRTHPDV 121 Query: 127 TIKLRNWD-YDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 T+ + + + + GE+D+ ++ L D L Sbjct: 122 TLTVVDDHLQRLVPRLETGELDLALIYDHEALPEISA-----RDLERMPLADDPFQAVLP 176 Query: 186 KDHPAL--HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 H + L P I + + + G +++ ++ Sbjct: 177 AGHRLARRRRPLELSDLSGEPWIGGSPNSAWYRITAHACRLAGFTPHASLASDDYIAVQA 236 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALP-LPFDESQQKKLEVPFTLLWHKRNSHNP 302 + A L ++ P + LP + + + + H P Sbjct: 237 LVAA--GLGVSLIPGLAVAH---------PLPGVEVRKLASGAPVRRISAARPRDGYHGP 285 Query: 303 KIVWLRETIKNLYASMA 319 + + E+++ A +A Sbjct: 286 PVAAMLESLRAAAAQVA 302 >UniRef50_C3KQ67 Transcriptional regulator, LysR family n=1 Tax=Rhizobium sp. NGR234 RepID=C3KQ67_RHISN Length = 307 Score = 200 bits (511), Expect = 4e-50, Method: Composition-based stats. Identities = 58/317 (18%), Positives = 108/317 (34%), Gaps = 22/317 (6%) Query: 2 KKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLG 61 K+ + +DL L L L+ S + AA R++V S VS ++ +LRA F DPLF+ Sbjct: 4 KQQLDGIDLGSLKVLVLVCDLGSFSAAANRLDVNQSTVSYTVERLRAVFRDPLFLRQGNR 63 Query: 62 LSPTPLMVSMEQNLAEWMQMSNL-LLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIY 120 + PT + + + ++ + +A I+L ++ Sbjct: 64 MLPTQKCSELTEAARRMLDQLAAFTAEQAFDPSSATGSVTVACNFHERQIVLPEFCARLR 123 Query: 121 QRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 + P + + + + E DI E + LF+D Sbjct: 124 RAAPNVRLVVLESAVHGKRQLKQNECDIVLGPIEIFGEAYF----------RTHLFTDRY 173 Query: 181 CVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQ 240 + + + +L + HI + L+ G A+ LP + Sbjct: 174 VCVMDPGNVLVQAPLSLQAYRSAQHIQVNHNGEWQGLYIAALEAKGVPFEPAVVLPSHDN 233 Query: 241 SLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 + A D L+AT P + +L +V PL + + W R + Sbjct: 234 LDRIIAGSD--LVATIPGRLAH-GLKEKLSVVEFPLDVP--------IHIDMYWTARTAQ 282 Query: 301 NPKIVWLRETIKNLYAS 317 + W R+ + + S Sbjct: 283 SGLHRWARQLLAEVARS 299 >UniRef50_Q0BXT0 Putative oxidative stress regulatory protein OxyR n=1 Tax=Hyphomonas neptunium ATCC 15444 RepID=Q0BXT0_HYPNA Length = 309 Score = 200 bits (511), Expect = 4e-50, Method: Composition-based stats. Identities = 47/321 (14%), Positives = 92/321 (28%), Gaps = 24/321 (7%) Query: 1 MKKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPL 60 M +I L L L L + S ++AA+ +VT +S + +L F L Sbjct: 1 MSMNIP--TLRQLQFLVALGESGSFSRAAEACHVTQPTLSAGIKELEDLFGVALAERESR 58 Query: 61 GLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQI 119 G + T + + ++ L+ F L A + +L + Q+ Sbjct: 59 GATLTHAGEIAVARASALLADAHALVQAVTSAGALFSGPFHLGAIPTIAPFVLPQIVGQL 118 Query: 120 YQRYPQATIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSD 178 +RYP + L + +D + +D F I+ LF D Sbjct: 119 TRRYPDLKLYLTEDRTHRLIDQLRARTLDAAFIALPWEAP----------GIEMMTLFDD 168 Query: 179 VPCVWLRKDHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQ-ELGRERTIAMSLP 236 + HP + + + + + +V + + G R Sbjct: 169 EFLLAAPAGHPLSRKNGLSPEDLQGEDLLLLEDGHCLRDHAVSVCRLKAGAGREQVA-AT 227 Query: 237 EFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHK 296 + M A L ++ PR + + + W Sbjct: 228 SLGTLVNMVAG--GLGVSLIPRLAADNGLALG-----PDVAVRSFVTPIIGRQVGIAWKS 280 Query: 297 RNSHNPKIVWLRETIKNLYAS 317 + + L E ++ Sbjct: 281 GSPREAEARALGELVREQLRG 301 >UniRef50_B2VHH8 Transcriptional regulator, LysR family n=1 Tax=Erwinia tasmaniensis RepID=B2VHH8_ERWT9 Length = 302 Score = 200 bits (511), Expect = 4e-50, Method: Composition-based stats. Identities = 64/311 (20%), Positives = 115/311 (36%), Gaps = 22/311 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +DLNL+ + + RSV+ AA R+ +T + S +LA+LR D+ LF S G+ PTP Sbjct: 5 MDLNLVRVFIAIYETRSVSGAAARLFITQPSASYALARLRVETDNELFKRSRKGMLPTPT 64 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQIYQRYPQ 125 + + + + + +P +F LA +++L L K + P Sbjct: 65 ANQLYEVFKKSISGIEKAVADTRSFSPETSFHRFRLALSDLGELLLLPRLVKHLRTVAPN 124 Query: 126 ATIKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 +++ + + + + G +D R + + + L Sbjct: 125 VRLEVIPVEMHKMDEWLLTGHIDAALCSRNERISLA----------QRDRIMDERYVCLL 174 Query: 185 RKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 HP + T L +L HI + + ++ ++E G ER IA+ +P F + Sbjct: 175 NNQHPRIGDTLTLPAWLNEQHIMVSASSG-HYMVEERIKEYGFERRIALEVPHFAALGEL 233 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 A + LL+ + Y +V LP + L H Sbjct: 234 IASSE-LLVLLPFSAAKVYAARGNGRIVELPFELPN-------LEVYLYGHPEIGDITAK 285 Query: 305 VWLRETIKNLY 315 W T+KN Sbjct: 286 TWFYNTLKNAC 296 >UniRef50_B5ZVD7 Transcriptional regulator, LysR family n=4 Tax=Rhizobium RepID=B5ZVD7_RHILW Length = 321 Score = 200 bits (511), Expect = 4e-50, Method: Composition-based stats. Identities = 67/323 (20%), Positives = 122/323 (37%), Gaps = 24/323 (7%) Query: 1 MKKS---ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVN 57 M + + +DLNLLL +LMQER+V++AA R+ + +S +L +LR DD LFV Sbjct: 1 MMMNDATLRKIDLNLLLAFSVLMQERNVSRAADRLLLGQPGLSAALRRLRETLDDELFVR 60 Query: 58 SPLGLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPR--GLKFELAAESPLMMIMLNAL 115 GL PTP +S+ + + + + P +F + L L Sbjct: 61 VGRGLQPTPRALSIAPAIEDALSGIERAIRPQADFDPASWQGEFRIGMCDNLESAFFGPL 120 Query: 116 SKQIYQRYPQATIK-LRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEV 174 ++ Q P A + + + D+ + G D S + Sbjct: 121 VARLLQLSPGARLIGIASEKRDAARRLDEGVFDFSVSVHDEPAS----------WHIRAP 170 Query: 175 LFSDVPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMS 234 LF+ + L +L+ F H+++ +E + + ++D L G R + + Sbjct: 171 LFNQASICIYDEAQLKLKAPLSLEDFANVAHVTVSFEGNASTSIDTALSRTGHVRRVVAT 230 Query: 235 LPEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLW 294 +P F + + + QLH L + A PL P T+L+ Sbjct: 231 VPRFSALPTALRAMPAISV-VPESIGRCMAQLHGLTICAPPLSLPAD-------PVTMLY 282 Query: 295 HKRNSHNPKIVWLRETIKNLYAS 317 + + + + W R ++ Sbjct: 283 RRVDQADGRARWFRRLFLDVADE 305 >UniRef50_Q0K190 Transcriptional regulator, LysR-family n=1 Tax=Ralstonia eutropha H16 RepID=Q0K190_RALEH Length = 295 Score = 200 bits (511), Expect = 4e-50, Method: Composition-based stats. Identities = 41/311 (13%), Positives = 102/311 (32%), Gaps = 25/311 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L LL + E + +KAA R++++ +S+ + L L V + + T Sbjct: 1 MELRQLLYFVTVADELNFSKAAVRLHMSQPPLSQQIKALEDEMGVELLVRNRREVRLTDA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHH-QTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + + ++ + + ++ + + +L + ++ +R+P Sbjct: 61 GRAFQADCRAVLEQVRVAVTTARRTAAGDIGTLQIGMVTSGIFHVLPTILTRMAERFPGL 120 Query: 127 TIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 I + + D A+ +G++DIG + +F++ + + Sbjct: 121 HIAVTDMGSADQAHAVMQGKLDIGIVHSIPTRS----------GLGKTPIFTEYFTIVVP 170 Query: 186 KDHPALHQT-WNLDTFLRYPHISICWEQ--SDTWALDNVLQELGRERTIAMSLPEFEQSL 242 + H + L P ++ E + + G IA + + Sbjct: 171 EGHELAARPALALRDLEGVPLVAFSREHAPALFDGMIASCLHAGFSPVIAHTARNPLTTF 230 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 M L +A PR + F E Q + +W ++ + Sbjct: 231 QMVK--LGLGVALVPRSYARAGLPG--------VVFREIGQTAGHIQLYAIWREQAPSDL 280 Query: 303 KIVWLRETIKN 313 + + E + Sbjct: 281 VMRVVSEVMSE 291 >UniRef50_A9I810 Transcriptional regulator, LysR-family n=5 Tax=Proteobacteria RepID=A9I810_BORPD Length = 329 Score = 200 bits (511), Expect = 4e-50, Method: Composition-based stats. Identities = 40/291 (13%), Positives = 92/291 (31%), Gaps = 20/291 (6%) Query: 6 TTLDL--NLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLS 63 ++L LL + +ER ++AA R++++ +S ++ +L + L + + Sbjct: 29 HAMELEPRLLRYFIAVAEERHFSRAAARLHLSQPPLSYAIRQLESTLGTRLLERTSRHVE 88 Query: 64 PTPLMVSMEQNLAEWMQMSNLLLDKPHHQ-TPRGLKFELAAESPLMMIMLNALSKQIYQR 122 T + + ++ S + + + ++ L L + Sbjct: 89 LTEAGRVLYREAQALLRQSEAIGTLVQRVGAGLRGRLRIGFVGSMLYRGLPDLLAAMRTA 148 Query: 123 YPQATIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPC 181 P L ++ ++A+ RGE D+GF + P + L ++ Sbjct: 149 LPDVEHVLTELNSHEQIEAVRRGEQDLGFI----------HANPAPAEVQTLNLVAEPFV 198 Query: 182 VWLRKDHPAL-HQTWNLDTFLRYPHISICW--EQSDTWALDNVLQELGRERTIAMSLPEF 238 + + HP + +L I S + ++ G I + + Sbjct: 199 LCVPDTHPLARRRRVSLQALAHDDFILFARAASPSYHETVLSLCVTAGFHPAIRHEVRHW 258 Query: 239 EQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVP 289 + +Q L ++ P + L +A P Q Sbjct: 259 LSVAALVSQ--GLGVSIVPACLAR-SGLAGTRFIAFDHPARSVSQAIWPRD 306 >UniRef50_B4WIK9 LysR substrate binding domain protein n=1 Tax=Synechococcus sp. PCC 7335 RepID=B4WIK9_9SYNE Length = 316 Score = 200 bits (510), Expect = 5e-50, Method: Composition-based stats. Identities = 54/321 (16%), Positives = 102/321 (31%), Gaps = 26/321 (8%) Query: 1 MKKSI-TTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSP 59 MK + + L+ L L + + + ++AA + ++ SAVS ++A L + LF Sbjct: 1 MKSNAQNRVKLSQLQILVAVAEYGNFSEAALSLGISQSAVSHAIASLENYLGIVLFNRGR 60 Query: 60 LGLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNALSKQ 118 G TP+ + + ++ +L + + +A+ + +L K Sbjct: 61 HGAILTPVGDRILMHAKTITNSTDAILQEAAAAKGLEKGQVRIASFRSISTHILPKAIKT 120 Query: 119 IYQRYPQATIKLRNWDYD--SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLF 176 +Q+ P TI L D + A+ G DIG + + L Sbjct: 121 FHQKLPGITISLTEHDTNKAVEQALKEGRADIGIVLMPAGE-----------GLTAWELL 169 Query: 177 SDVPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLP 236 D V L D + P I + + + LG + + Sbjct: 170 QDEFVVLLSPDTHLEGNSLTWRELSEQPLIMSPIDYPAMRPVYEHINALGYWLNVVNEVE 229 Query: 237 EFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHK 296 + + Q L P+ + + +LP P + Sbjct: 230 TDAAIVNLVEQ--GLGGTILPKLAAE-PIPEAVQVFSLPEPLMRMIGVAIATE------- 279 Query: 297 RNSHNPKIVWLRETIKNLYAS 317 P + L ET+K + S Sbjct: 280 -TLQPPPVYALLETLKEIATS 299 >UniRef50_B4UKP3 Transcriptional regulator, LysR family n=4 Tax=Anaeromyxobacter RepID=B4UKP3_ANASK Length = 311 Score = 200 bits (510), Expect = 5e-50, Method: Composition-based stats. Identities = 49/311 (15%), Positives = 101/311 (32%), Gaps = 22/311 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +DL L ++++ T+AA ++VT AVSK++ L PL PT Sbjct: 1 MDLRGLGAFVEVVRQGGFTRAAAALHVTQPAVSKAVRALEDEIGVPLLERGARRTVPTEA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQ-TPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 ++ + + D+ R + + + + QRYP Sbjct: 61 GRAVLARAEGVLAAVRAIEDEVADLGALRRGRARVGLPPMVSGAFFPPVLAAYRQRYPGI 120 Query: 127 TIKLRNWDYDSLDAI-TRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 ++LR ++A+ G +D+G + + E L + DV L Sbjct: 121 QLELREEGAREVEALVASGALDVGVTVLPTDEARFEALPFVH----------DVLAAVLH 170 Query: 186 KDHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 P + L P + + + + + + G +A +++ Sbjct: 171 PASPLARRPRLALADLAGTPFLLYRADFALRGRILDACRAAGFSPQVASETGQWDFMAA- 229 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 ++ +A PR Q+ +V L + L+W + + + Sbjct: 230 -MAAADVGVALLPRTICRRLDPAQVAVVPL-------AAPAIGWNLGLIWRREGTLSAAA 281 Query: 305 VWLRETIKNLY 315 ET + + Sbjct: 282 RAFVETAREVL 292 >UniRef50_A8T595 Transcriptional regulator, LysR family, putative n=3 Tax=Vibrio RepID=A8T595_9VIBR Length = 301 Score = 200 bits (510), Expect = 5e-50, Method: Composition-based stats. Identities = 66/317 (20%), Positives = 120/317 (37%), Gaps = 27/317 (8%) Query: 1 MKK-SITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSP 59 M T+LD LL + + +SVTKAA+ + VT S VS L +LR D LFV S Sbjct: 7 MNNFDYTSLDGRLLRMFISVYENQSVTKAAESLKVTQSTVSHGLNQLRKIVKDELFVASG 66 Query: 60 LGLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPR--GLKFELAAESPLMMIMLNALSK 117 ++PTP + + E + P F +AA + ++ + Sbjct: 67 RSIAPTPKATELIHHAREIVIAM-QTFASQQQYDPSIDTASFTVAANDYEIETIIKPMFH 125 Query: 118 QIYQRYPQATIKLRNWDYDS--LDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVL 175 + + P++++ + + G VD+ S L+S + + Sbjct: 126 RFQEEAPKSSLHIAPARTQLQWASLLRSGNVDLVLSPE---------LTSNESDLVQTKV 176 Query: 176 FSDVPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSL 235 SD + + + LD + + PH + + QS +D +L +LG+ R + + Sbjct: 177 LSDQDVCFYNPSKQSAPK--TLDQYCQMPHAIMSFGQSHHTEIDTLLHKLGKRRRVVTTA 234 Query: 236 PEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWH 295 P F + + + ++AT P + LP +WH Sbjct: 235 PSFASIASLIKETN--IIATMPARLAQ-SIFKDFEQAPLPFELP-------PFNIVKVWH 284 Query: 296 KRNSHNPKIVWLRETIK 312 RN + + W ++ +K Sbjct: 285 NRNKQSQRHAWFKDLMK 301 >UniRef50_C7NK10 Transcriptional regulator n=1 Tax=Kytococcus sedentarius DSM 20547 RepID=C7NK10_KYTSD Length = 300 Score = 200 bits (510), Expect = 5e-50, Method: Composition-based stats. Identities = 47/315 (14%), Positives = 89/315 (28%), Gaps = 21/315 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L L L R+ +AA V+ +S + KL A L + TP Sbjct: 1 MNLRDLEYLVALGDHRNFGRAAAACGVSQPTLSTQVKKLEAVLGCALVERAGRQTLLTPA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQ-TPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + + + PR L L +L + ++Q P+ Sbjct: 61 GEQIAGRARRMLGHAEAIHRVAEQARDPRSGSLRLGIFPTLAPYLLPHVVPAVHQALPEL 120 Query: 127 TIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + L D + + G +D + E LF + + + Sbjct: 121 NLLLVEERTPDLMQQLREGTLDAVVLAGPLTDP----------GLAVEPLFREDFLLAVP 170 Query: 186 KDHPALHQ-TWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 DHP Q T + + + +V + G E M Sbjct: 171 LDHPLAGQETVDPSVLGDESVLLLEDGHCLRDQALDVCRSSGAVEMDGFRATSLETLRHM 230 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 A + + PR + E L W + + + Sbjct: 231 VAS--GVGVTLMPRMAVDRPGGPGG------VATVEFTAPAPHRDIVLAWRTSSVQDDLM 282 Query: 305 VWLRETIKNLYASMA 319 L + ++++ A +A Sbjct: 283 PELADLLRSVPAPLA 297 >UniRef50_A5W561 Transcriptional regulator, LysR family n=12 Tax=Proteobacteria RepID=A5W561_PSEP1 Length = 317 Score = 200 bits (510), Expect = 5e-50, Method: Composition-based stats. Identities = 59/311 (18%), Positives = 103/311 (33%), Gaps = 21/311 (6%) Query: 10 LNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSP-LGLSPTPLM 68 L L ++ SV +A++++ + ++S ++ L F LF+ G+S TP Sbjct: 22 LRQLKYFVTTVEAGSVAEASRQLYIAQPSISTAIKSLEESFGVQLFIRHHAQGVSLTPSG 81 Query: 69 VSMEQNLAEWMQMSNLLLD-KPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQAT 127 +QM++ + ++ + + L L QRYP Sbjct: 82 KRFYAKTKSLLQMAHEFEQNALADNDTVAGQIDIGCFETVAPLYLPRLIAGFRQRYPGVD 141 Query: 128 IKLRNWD-YDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRK 186 I+LR+ + D + +T G D+ F + E +P P V L + Sbjct: 142 IRLRDGEQQDLIQGLTAGTFDLAFLYDHDLDGTIEAEPLMPPQ---------KPYVLLPE 192 Query: 187 DHPALHQ-TWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMA 245 +H Q +L P I + S ++ E+G I S P E M Sbjct: 193 NHRFAGQAQVSLRDLCPEPMILLDVAPS-RTYFVSLFNEMGLAPNIVFSSPSIEMVRGMV 251 Query: 246 AQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIV 305 Q L + +Y +L ++ + P S W KR Sbjct: 252 GQGFGFSLLVTRPHSEYTYDGQRLAMLDIAEPVALSG-------LAAAWLKRVQLTKPAQ 304 Query: 306 WLRETIKNLYA 316 E + A Sbjct: 305 LFVEFCREELA 315 >UniRef50_B5F9Z3 Transcriptional regulator, LysR family n=3 Tax=Vibrionales RepID=B5F9Z3_VIBFM Length = 309 Score = 200 bits (510), Expect = 5e-50, Method: Composition-based stats. Identities = 72/322 (22%), Positives = 133/322 (41%), Gaps = 22/322 (6%) Query: 1 MKKSI-TTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSP 59 M K + TLDLNLL +L QE ++ KA++R+ V+ A+S++L KLR F+D LF+ Sbjct: 1 MAKDLFATLDLNLLRTFLILSQELNMRKASERLFVSQPAISQALQKLRNHFNDELFIKVR 60 Query: 60 LGLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTP--RGLKFELAAESPLMMIMLNALSK 117 GL PTP + +N+ ++ + +L+ P ++A ++ + AL Sbjct: 61 HGLKPTPFAEELAENIQPYLDGLSSVLNASQEFKPENLNKTIKIALAPQVLTCLSGALFH 120 Query: 118 QIYQRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFS 177 I ++ P ++L NW + D + +G++D+ + +P + + L + Sbjct: 121 DIKEKAPNVDLQLVNWSESTFDDLAKGKLDLAINYEYD---------KVPKELLSKNLIT 171 Query: 178 DVPCVWLRKDHPALHQTWNLDTFLRYPHISI--CWEQSDTWALDNVLQELGRERTIAMSL 235 CV +R +HP F Y S+ + VL + E I Sbjct: 172 ITGCVIVRINHPIEKTVATPYDFEGYELASLIIPGWNDNKSLASEVLTNMDIEHKIGFRS 231 Query: 236 PEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWH 295 + + D +T+ Y+ L ++ L +P P +H Sbjct: 232 ELPMALIDVIQHTDMYFPSTSLFPIHQYSSLRRIDLSLDDVPL--------NYPIYTYYH 283 Query: 296 KRNSHNPKIVWLRETIKNLYAS 317 +R+ N W+ + I +L + Sbjct: 284 QRHKKNALHAWINQLITDLLSE 305 >UniRef50_B9Z173 Transcriptional regulator, LysR family n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z173_9NEIS Length = 296 Score = 200 bits (510), Expect = 5e-50, Method: Composition-based stats. Identities = 44/314 (14%), Positives = 98/314 (31%), Gaps = 22/314 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +D+ L +++ +S T+AA + VT +SK + L PL + + Sbjct: 1 MDIKALRYFIEVVRRQSFTRAADALFVTQPTISKMVKHLEEELGVPLIIREGRSFQLSDA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + + + L + + + + + + YP Sbjct: 61 GKVAYERGQDVLAAMSRLKTELSDLSALTRGELIVGLPPMVGGAFFAPVVSSFRAHYPNV 120 Query: 127 TIKLRNWDYDSLDA-ITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 +K+ + S+++ I G+++IG + + S + D C+ Sbjct: 121 ELKMVEYGARSIESNIRSGQLEIGVAVLPVDRQVFNTFSFV----------RDRLCLVAP 170 Query: 186 KDHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 Q L P + + S + + + LG+ IA ++ M Sbjct: 171 DQSRWHGQRNIKLADIADEPIVFYPEDFSLSTLVSQGFRRLGKTIHIAGRSAHWDFIAAM 230 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 L +A P L P +K++ L+W K + Sbjct: 231 VEA--RLGIALLPESVAA-------RLYGRPFDVIPLDEKEIIWHLALIWQKDVYLSHAA 281 Query: 305 VWLRETIKNLYASM 318 + +++ S+ Sbjct: 282 RAWIQMSRDMLGSL 295 >UniRef50_A5V6I2 Transcriptional regulator, LysR family n=1 Tax=Sphingomonas wittichii RW1 RepID=A5V6I2_SPHWW Length = 301 Score = 200 bits (510), Expect = 5e-50, Method: Composition-based stats. Identities = 64/319 (20%), Positives = 121/319 (37%), Gaps = 21/319 (6%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 LDLNLL+ L + RSV+ AA+ ++++ SA+S +LA+LRA+FDD L V L Sbjct: 1 MRFQGLDLNLLVAFDTLAEHRSVSLAAEAMHLSQSAMSAALARLRAYFDDELLVPRGRTL 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQIY 120 TP + + + + + + P P +F + A + ++L ++ Sbjct: 61 VLTPRAEQLAPEVRDTLLRIHATIAHPAAFDPIETKREFTIVASDYVQAVLLEPFMRKAA 120 Query: 121 QRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 P ++ +D RG +D+ + LF D Sbjct: 121 HHAPGMRFRILPISQQGIDEFKRGVIDLIIVADSVILP----------EHPSQKLFEDEA 170 Query: 181 CVWLRKDHPALHQTWNLDTFLRYPHISIC-WEQSDTWALDNVLQELGRERTIAMSLPEFE 239 + DHP + +++ F H++ D +L E R I + +P F Sbjct: 171 KLICSADHPTIGDEISMEQFGTVGHVTTSLHHHRPGSLFDLMLLERSIARRIEIQVPAFS 230 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 + + + R Y ++ + L++LP ++ WH Sbjct: 231 MMAGAVVGTERVAI-LHARLATSYARILPIKLLSLPFALPPIREVIQ-------WHALRQ 282 Query: 300 HNPKIVWLRETIKNLYASM 318 + + WL E + + A++ Sbjct: 283 RDRGLQWLLEALTSEAAAL 301 >UniRef50_A7GMD6 Transcriptional regulator, LysR family n=3 Tax=Bacillaceae RepID=A7GMD6_BACCN Length = 294 Score = 200 bits (510), Expect = 6e-50, Method: Composition-based stats. Identities = 40/310 (12%), Positives = 94/310 (30%), Gaps = 24/310 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +D+ L + QE +T+AAKR+++ +S+ L L L + L T Sbjct: 1 MDIRQLRYFYTIAQEGQITRAAKRLHMAQPPLSQQLKLLEQELGVQLLERNGRKLELTEA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQ-TPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + E + + + + + + + + + ++ YP Sbjct: 61 GHVLFKKTKEILTHFHETITEVKEVGSGLKGTLSIGSVKSAFSYI-PDRLRSFHETYPLV 119 Query: 127 TIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 T +L+ D I E+++ L +D + Sbjct: 120 TFRLQEGDSFRLAQLIKNREIELAIVRLPLEME----------DFASLSLPADQFVAVMP 169 Query: 186 KDHPALHQTWNLDTFLRYPHISICW--EQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 D ++ + P + + + Q+ G + I P+ L Sbjct: 170 NDKADNRSMISMKELAKLPLMLLQRIKGFGLYEKVLENFQKHGLKPNIICDCPDAAMLLS 229 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 + + P+ L+ + ++ + + ++W K S + Sbjct: 230 LVRS--GIGCTLLPKSTLIALPLNGIKMMD-------IEDSTITSDSAVIWLKNRSLSKV 280 Query: 304 IVWLRETIKN 313 + ET +N Sbjct: 281 ALHFLETFRN 290 >UniRef50_C6E9D5 Transcriptional regulator, LysR family n=8 Tax=Desulfuromonadales RepID=C6E9D5_GEOSM Length = 305 Score = 200 bits (510), Expect = 6e-50, Method: Composition-based stats. Identities = 52/315 (16%), Positives = 101/315 (32%), Gaps = 24/315 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L + + S +K A+ +T S VS+ ++ L + F L + G PT Sbjct: 1 MNLKQLEVFIKVAESGSFSKGAEATFITQSTVSQHISALESEFGMKLLDRTGKGALPTEG 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTP-RGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + + ++ + + + +A S M+ A + R+P Sbjct: 61 GKILLERARKLVEYAKEIPVALARFKGIEEAELNIAGSSIPGEYMIPAALPLLISRFPGV 120 Query: 127 TIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 TI L D L + EV+ G G S +D+ L D + Sbjct: 121 TIVLLQGDSRDVLRKLMAEEVEFGVVGGRFEEES----------LDFTPLAKDELVLIAP 170 Query: 186 KDHPALHQ-TWNLDTFLRYPHISICWEQSDTWALDNVLQELGRER---TIAMSLPEFEQS 241 H + + + P + A L+E G + +A+ L E Sbjct: 171 AGHRWAKKSRITKEELMAEPFVLRETGSGTGRATAKALREAGLDPAKLKVAVHLGSNEAV 230 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 + +A + Q + + + + F L K + Sbjct: 231 KRAVIAGIGVSYVSAVSVQRELEQGSLVQVRVAEVEI--------KRDFFLATRKGRELS 282 Query: 302 PKIVWLRETIKNLYA 316 P + +E + +YA Sbjct: 283 PAAIAFKEIMIEMYA 297 >UniRef50_C6XSY8 LysR substrate-binding n=12 Tax=Bacteroidetes RepID=C6XSY8_PEDHD Length = 307 Score = 200 bits (510), Expect = 6e-50, Method: Composition-based stats. Identities = 49/317 (15%), Positives = 112/317 (35%), Gaps = 26/317 (8%) Query: 7 TLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTP 66 ++L L Q+L +E KAA+R+ ++ +S+ + ++ F+ LF S + T Sbjct: 4 QIELRHLKYFQVLAEELKFRKAAERLFISQPGLSRQIMQMEEIFNVALFDRSKKKVELTA 63 Query: 67 LMVSMEQNLAEWMQMSNLLLDKPHHQ-TPRGLKFELAAESPLMMIMLNALSKQIYQRYPQ 125 + ++ + + + + R + + + ++ L + + YP Sbjct: 64 AGLYLKDEVDFLFNHLETVKRQLDNIGQGRETELRIGFLGSAVQKIVPELVLGLNKEYPG 123 Query: 126 ATIKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 L ++ + + ++D+GF L LP I ++ + + L Sbjct: 124 IQTILDEMPNKMQIELLEKDKLDLGFVR----------LHRLPEGISRHLVQQETFSLVL 173 Query: 185 RKDHPALHQTW-NLDTFLRYPHISICWEQS--DTWALDNVLQELGRERTIAMSLPEFEQS 241 K HP + + F P I E S + ++ ++ G + Sbjct: 174 PKQHPINEFNFKGIAEFSNEPFIFFSSEDSPFYHDLITSICEDHGFRPKVFHRSVNALTI 233 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 + + + LA P QY + L + F E + + W K ++ N Sbjct: 234 FKLIEE--GMGLAIVPTSLQY---GYNLNVR-----FIELKNIPQRTELYVAW-KASNRN 282 Query: 302 PKIVWLRETIKNLYASM 318 P + + + ++ + Sbjct: 283 PALKNVIKLLRKSIPEL 299 >UniRef50_A1TYB8 Transcriptional regulator, LysR family n=39 Tax=Proteobacteria RepID=A1TYB8_MARAV Length = 319 Score = 200 bits (510), Expect = 6e-50, Method: Composition-based stats. Identities = 40/312 (12%), Positives = 82/312 (26%), Gaps = 29/312 (9%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 + L L + L +ER +AA+R +V+ +S ++ KL PLF S + T + Sbjct: 1 MTLTELRYVVTLARERHFGRAAERCHVSQPTLSVAVKKLEDELGIPLFERSKSSIRVTEV 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQ-TPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + + ++ D ++ A + + L ++ + P Sbjct: 61 GQRIIEQAQRVLDQVGVIKDMAQDGKNQLNSPLKVGAIYTIGPYLFPHLLPELRRAAPDM 120 Query: 127 TIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + + + E+D + L+ + V L Sbjct: 121 PLYIEENYTASLRQKLRHSELDAIIIALPFEEP----------EVVTLPLYDEPFVVLLP 170 Query: 186 KDHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVL---------QELGRERTIAMSL 235 DHP + + + + + + + + Sbjct: 171 ADHPLTEKEQVTAEEMAKEQLLLLGPGHCFRDQVLESCPPLVDAITKRADNGRPELVTEG 230 Query: 236 PEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWH 295 E M A L + P + + L P L W Sbjct: 231 SSLETIRHMVAS--GLGITVLPLSAATAIKYQEDILAVRPFAAPVPF-----RTVALAWR 283 Query: 296 KRNSHNPKIVWL 307 I L Sbjct: 284 VTFPRPKAIDVL 295 >UniRef50_UPI000178A79D transcriptional regulator, LysR family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI000178A79D Length = 291 Score = 200 bits (510), Expect = 6e-50, Method: Composition-based stats. Identities = 49/308 (15%), Positives = 100/308 (32%), Gaps = 21/308 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L + + +S TKAA + S+V+ + KL + LF GL T Sbjct: 1 MELIYLQTFREVAVRKSFTKAADELGYAQSSVTTQIQKLEKEYGVKLFERYGRGLRLTKS 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQAT 127 + + + + + +K G + L L ++ ++ Q + Sbjct: 61 GEELFKYAVQMLDLFQQSKEKLT--KQGGGILSIGTIDSLAAYFLPSVLHRLRQEHEDLA 118 Query: 128 IKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRK 186 I+L+ D + + GE D+G ++++ + + + Sbjct: 119 IRLQTDREDSIVSKVREGEYDLGLILENKPE---------DTSLNWISIREEPLHLIAHP 169 Query: 187 DHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMA 245 DHP L+ Y I + L+ VL+ G I + L E Sbjct: 170 DHPLHRLPVIELEHLADYEWIMTEDTCNYRIMLEKVLRASGAPVRIGLELGNPEAIKRYI 229 Query: 246 AQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIV 305 ++ PR L LP + + ++ H + + + Sbjct: 230 MS--GTGISLLPRMVAEEEIKRG-ELAILPFQHP-----DIRLDIQIVVHPKKWLSHSLQ 281 Query: 306 WLRETIKN 313 + E +K+ Sbjct: 282 DMIEMLKS 289 >UniRef50_UPI0001C36638 LysR family transcriptional regulator n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C36638 Length = 301 Score = 200 bits (510), Expect = 6e-50, Method: Composition-based stats. Identities = 49/317 (15%), Positives = 104/317 (32%), Gaps = 26/317 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L + + +S ++AAK++ +T VS + L LF+ + + +P Sbjct: 1 MNLKQLEAFVCVAEVKSFSQAAKKLYLTQPTVSAHIHSLEKELGARLFIRTTKDVELSPA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQT-PRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + N + +Q+ +L P K + A + +L + + YP Sbjct: 61 GELLYGNARKMLQLEKNILRDFTRADTPGIQKITVGASTVPGQYILPQILSLFSRTYPGN 120 Query: 127 TIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 ++L D + + + G+V+IGF+G + +E + D V Sbjct: 121 QLELMEADSLEVVRMVLDGKVEIGFTGTRLEDPTC----------VFEPFYYDRLVVITP 170 Query: 186 KDHPAL---HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERT---IAMSLPEFE 239 + ++ F I + L+E G + + ++ E Sbjct: 171 NAEAYREYEKTGFPIERFYEEKWIIREEGSGTRKETERYLKEHGVDLRRMNVVATISNQE 230 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 + +A L+ PL + + ++W K N Sbjct: 231 TIKKSV--STAMGIAMISSAAVEDYVASG-QLLRFPLA-----EGDIYRKLYMVWSKSNK 282 Query: 300 HNPKIVWLRETIKNLYA 316 + ++ LYA Sbjct: 283 PGKAARLFIQFVRELYA 299 >UniRef50_Q7WC66 LysR-family transcriptional regulator n=3 Tax=Bordetella RepID=Q7WC66_BORPA Length = 320 Score = 200 bits (510), Expect = 6e-50, Method: Composition-based stats. Identities = 42/317 (13%), Positives = 101/317 (31%), Gaps = 23/317 (7%) Query: 2 KKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLG 61 + + ++L LL L+ + S +AA+ + + +AV+ + +L A LF + Sbjct: 6 SRPLPNINLKLLHTFMLVAEHCSFRQAAELSHRSQAAVTGQIKQLEAQLGVDLFHRTTRQ 65 Query: 62 LSPTPLMVSMEQNLAEWMQMSNLLLDKPHH-QTPRGLKFELAAESPLMMIMLNALSKQIY 120 + T + ++ + L + + + L+ + + L + Sbjct: 66 VRLTAEGAQLLESARRAVHEMENGLRQIQETVDLKRGRIFLSCSTTVSSTRLAPILAAFE 125 Query: 121 QRYPQATIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 + YP + +R D + + R E D G P D+E + ++ Sbjct: 126 RDYPGVEVFVRELTSGDMFETVRREEADFGIGPIMELP-----------EFDFEPILTEN 174 Query: 180 PCVWLRKDH-PALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEF 238 + ++ P + L P + + + +D+ + G + Sbjct: 175 LYAVVPRNLFPDTAEQITLARLASMPLLLLNPGTALRALIDDTARSRGLTINTKFQFSQA 234 Query: 239 EQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRN 298 + + M L A P + + LP+ ++ + Sbjct: 235 QTLISM--ATAGLGAAVLPAMVLPAKPHKDVQV--LPIASPRMT-----RDVAIVRLRHR 285 Query: 299 SHNPKIVWLRETIKNLY 315 P L + +++L Sbjct: 286 KLTPAAARLAQLVRDLI 302 >UniRef50_C6VMR5 Transcription regulator n=5 Tax=Lactobacillus RepID=C6VMR5_LACPJ Length = 309 Score = 200 bits (510), Expect = 6e-50, Method: Composition-based stats. Identities = 45/313 (14%), Positives = 102/313 (32%), Gaps = 20/313 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L+ + L + + + KAA+ + ++ ++S ++ KL PLF + T + Sbjct: 1 MNLRHLVFFKELARTQHMAKAAENLGISQPSLSYAIKKLEHELGVPLFEADGRNIKLTSI 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQ-TPRGLKFELAAESPLMMIMLNALSKQIYQRYPQ- 125 + + + + + P +L L ++ L + Sbjct: 61 GGVYLKYVTATLNDLSQGNELVKQLMDPDTGHVKLGFTYTLGQQLVPELLSHFKNQSENQ 120 Query: 126 -ATIKL-RNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVW 183 T +L + L A+ + DI + + D+ L Sbjct: 121 AITFELGQGNSGVLLQALADEKYDIVLASNVDRLGEQLTAHL----FDFIPLVQQEIVAV 176 Query: 184 LRKDHPALHQ-TWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 + DHPA+ + +++ YP I +D +L + +A + E Sbjct: 177 VPNDHPAVQKNPLHVEDLAPYPMILFSQNSGLRPLIDQILSAAHVQPKVAYEVEEDHTMA 236 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 N+ +A P ++ + L + L+ L+ + P Sbjct: 237 GFVR--YNMGVALMPYL--PLLNPERVQIKHL-------ADQPLQHQIYLVVRRSGFITP 285 Query: 303 KIVWLRETIKNLY 315 + +E I++ Sbjct: 286 AVHRFQEFIRSYC 298 >UniRef50_A8FU12 Transcriptional regulator n=2 Tax=Gammaproteobacteria RepID=A8FU12_SHESH Length = 304 Score = 200 bits (510), Expect = 6e-50, Method: Composition-based stats. Identities = 75/319 (23%), Positives = 137/319 (42%), Gaps = 24/319 (7%) Query: 1 MK-KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSP 59 M ++ +DLNLL L+ L++ER V +AA+++NV+ SA+S +LA+LR FDD LF+ + Sbjct: 1 MNENNLAKVDLNLLKSLRALIEERHVGRAAQKMNVSQSAMSHTLARLRGVFDDSLFIRNA 60 Query: 60 LGLSPTPLMVSMEQNLAEWMQMSNLLLDK-PHHQTPRGLKFELAAESPLMMIMLNALSKQ 118 GL PT + + L ++ + LL + F + ++ L+ K+ Sbjct: 61 KGLEPTARAIELSDKLRFILREIDSLLAPKTLELSHIHAHFRIQTHDFILASYLSKAFKR 120 Query: 119 IYQRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSD 178 I P I ++ D + D + GE+++ + L + Sbjct: 121 INHEAPNILIDIKILDETAYDKLDDGELEMIIGAGLQAKP----------RFMQKRLTDE 170 Query: 179 VPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGR-ERTIAMSLPE 237 L K +P L + W +T RYPHI + + +G +R I Sbjct: 171 NLVCLLDKGNPVL-KNWTPETIFRYPHIKSSLLDDRDDPVSKYGKAMGLPKRKIGFLAET 229 Query: 238 FEQSLFMAAQPDNLLLATAP-RYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHK 296 L + + D L+A P + +Q++ L + P P + +WH+ Sbjct: 230 LNFQLPLLSDSD--LIAFLPDSIAKKGSQVYGLVVKECPFPLP-------PLTIRAMWHE 280 Query: 297 RNSHNPKIVWLRETIKNLY 315 R+ ++ W+RE I++++ Sbjct: 281 RHQNDVVHQWIREKIEDVF 299 >UniRef50_B4D9T5 Transcriptional regulator, LysR family n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D9T5_9BACT Length = 307 Score = 200 bits (509), Expect = 6e-50, Method: Composition-based stats. Identities = 47/311 (15%), Positives = 101/311 (32%), Gaps = 26/311 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +DL L Q + +E S ++AA+R+ + A+S+++ ++ A P+ + +S TP Sbjct: 1 MDLRHLRYFQAVAEELSYSRAAERLRIAQPALSRAVQEIEAELGGPVLDRNRRKVSLTPA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHH-QTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + + A + + + +F L P L L + QRYP+ Sbjct: 61 GLVLLRETAIVFERWEEAMRRVRRTAAGEEGEFRLGYIGPPTQPFLGRLLAEYRQRYPRV 120 Query: 127 TIKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + L + + + + +G + F+ S + + L + + Sbjct: 121 AVHLEERTPERVWEMLAKGRLSAAFTRPVSAAPAS--------GLRTLGLRQERFGAVVP 172 Query: 186 KDHPAL-HQTWNLDTFLRYPHISICWEQSD--TWALDNVLQELGRERTIAMSLPEFEQSL 242 HP +T + R P + + + + +E G +A + L Sbjct: 173 PSHPLATRKTMSWKLLAREPLVILARREGVGSHDGILAACREAGFAPRLAYTPSLIGTVL 232 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 + + L +PL + L + P Sbjct: 233 SYVEAGAGVGIVP------DSVVTPDFKLRFIPLQPVVTVPLVLVW-------QEREDTP 279 Query: 303 KIVWLRETIKN 313 + RE + Sbjct: 280 AVQRFRELVAQ 290 >UniRef50_C8NRP5 Transcription regulator n=2 Tax=Corynebacterium efficiens RepID=C8NRP5_COREF Length = 309 Score = 200 bits (509), Expect = 6e-50, Method: Composition-based stats. Identities = 43/313 (13%), Positives = 94/313 (30%), Gaps = 27/313 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++ L + R+ ++AA ++++ +S+ + L PLF + G+ T Sbjct: 2 IEARQLKYFLAVASARNFSRAADDLHISQPPLSRQIRLLEKQIGTPLFERTSQGVELTAA 61 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + + + L ++ L KQI + P+ Sbjct: 62 GSFLAERAPAILNELEEVERDVRAIGQGSMGVLRLGFVGTATHQLMPQLLKQITIQLPEV 121 Query: 127 TIKLRN--WDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 +++ D + ++D I+ E D + + Sbjct: 122 EVRVSGEKLTPDLERLLFTRQLDAAVLRPPVSSP----------DIELESFGVDDFMLAV 171 Query: 185 RKDHPA--LHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 HP T +P I+ + + + + G E +A PE L Sbjct: 172 HPGHPLYDQEGTIPFTDLAEHPIIAFKEGSAAEQIIRHAAHQAGFELRVAHHAPETSTVL 231 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 + + L +A P + +L + + + L W K N +P Sbjct: 232 ALVSA--GLGIALVPH-GSIPQPMGELRMREV--------SGGPTIGLALAWLKGN-RSP 279 Query: 303 KIVWLRETIKNLY 315 + L+ + Sbjct: 280 ILRQLKPLLDTAA 292 >UniRef50_B9J825 Nod transcriptional regulator protein n=1 Tax=Agrobacterium radiobacter K84 RepID=B9J825_AGRRK Length = 333 Score = 200 bits (509), Expect = 6e-50, Method: Composition-based stats. Identities = 68/323 (21%), Positives = 120/323 (37%), Gaps = 25/323 (7%) Query: 1 MKK----SITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFV 56 M ++ +DLNLLL +LMQER+V++AA+R+ + +S +L +LR DD LFV Sbjct: 1 MAMMNDAALRKIDLNLLLAFSVLMQERNVSRAAERLLLGQPGLSAALRRLRETLDDELFV 60 Query: 57 NSPLGLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPR--GLKFELAAESPLMMIMLNA 114 GL PT +S+ + + + + P P +F + L Sbjct: 61 RVGRGLQPTARALSIAPAIEDALSGIERAIRPPAAFDPSSWQGEFRVGMCDNLESDFFGP 120 Query: 115 LSKQIYQRYPQATIKLRNWD-YDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYE 173 L+ ++ P A + +D ++ + G D S + Sbjct: 121 LAARLRGLAPNARLTGVAFDKREAGRLLDEGAYDFSISVHDEPAS----------WHIRA 170 Query: 174 VLFSDVPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAM 233 LF+ H L L+ F + HI++ E + +D L +G R + Sbjct: 171 PLFNQASACIYDPRHIRLDAPLGLEDFAKADHITVSLEGNTLTNVDLALARVGYHRQVVA 230 Query: 234 SLPEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLL 293 ++P + + + QLH L + PL P T+L Sbjct: 231 TVPRYSALPMALRAMPAIA-TIPESIARCMAQLHNLTVSQPPLDLPAD-------PVTML 282 Query: 294 WHKRNSHNPKIVWLRETIKNLYA 316 + + + + + VW R + A Sbjct: 283 YRRVDQADSRAVWFRRLFVEVVA 305 >UniRef50_B7X2W7 Transcriptional regulator, LysR family n=1 Tax=Comamonas testosteroni KF-1 RepID=B7X2W7_COMTE Length = 302 Score = 200 bits (509), Expect = 6e-50, Method: Composition-based stats. Identities = 51/299 (17%), Positives = 108/299 (36%), Gaps = 22/299 (7%) Query: 22 ERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSMEQNLAEWMQM 81 ER++++A +R++++ A+S +LA+LR +F D L + + TP + + + + E + Sbjct: 20 ERNISRAGERLHLSQPAMSNALARLRNFFGDELLASQGRQMVLTPRALGLIEPVREVLMR 79 Query: 82 SNLLLD--KPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQATIKLRNWDYDSLD 139 + + T F L + + L + +YQ+ ++LR+ + + Sbjct: 80 IDSTITTPPLFDPTESTRTFVLLLSDFTTAVFIPPLLEALYQQARGIGLELRSLNDKPAE 139 Query: 140 AITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPALHQTWNLDT 199 + +G+ D+ + + LF + +H + + + Sbjct: 140 QLEQGDADLLIIPEQFAA----------VDHPRAPLFEEQYLCVTWANHSRIREELTFND 189 Query: 200 FLRYPHISICWEQS-DTWALDNVL-QELGRERTIAMSLPEFEQSLFMAAQPDNLLLATAP 257 +L H+ + A D G R + +S P M D + Sbjct: 190 YLECGHVVANYATGQQRAAFDGWFLDRFGINRKVEVSAPSMAALPQMVVGTDRIA-TVHR 248 Query: 258 RYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWLRETIKNLYA 316 R ++ + L PL Q L WH+ +P + W+RE + Sbjct: 249 RLALQAEKVLPIKLWPPPLEVPMLVQT-------LQWHRHRDADPALQWMRELAFRVGR 300 >UniRef50_Q13GE5 Transcriptional regulator, LysR family n=1 Tax=Burkholderia xenovorans LB400 RepID=Q13GE5_BURXL Length = 303 Score = 200 bits (509), Expect = 6e-50, Method: Composition-based stats. Identities = 41/309 (13%), Positives = 107/309 (34%), Gaps = 23/309 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +LN ++ + + S +AA+ + + SAVS +++L LF + ++ T Sbjct: 5 FNLNNVITFLAVAETLSFRRAAEHTHTSQSAVSARVSQLEDRLGVRLFHRTTRQVTLTAE 64 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + ++ + + + + +AA + +L + + ++RYP Sbjct: 65 GLQLFVVARTAVEDMERVAESLRKKAALQSGELTIAAVPSIGQTVLPTIMGEFHRRYPGV 124 Query: 127 TIKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 T+KL + D ++ + G VD+ I +E LF D + + Sbjct: 125 TLKLLDVDSQRCIEMMEAGSVDLAIVSDLEDR----------HDIVFEPLFRDECFLVVP 174 Query: 186 KDHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 + H ++ +L +P ++ + ++ G + + Sbjct: 175 RTHALGERRSISLREAASFPLMASPRGTTLWQIIERAFAACGATPVAHQETWNMSTLVRL 234 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 + + + P C + + +++L ++ + + S +P Sbjct: 235 VEEGFGMGI--VPEICLGKLDVSRCTVLSL--------EEHVGRMIGVARMTNRSESPGS 284 Query: 305 VWLRETIKN 313 R+ + Sbjct: 285 KAFRQLLGE 293 >UniRef50_B7RWY7 LysR substrate binding domain protein n=2 Tax=unclassified Gammaproteobacteria (miscellaneous) RepID=B7RWY7_9GAMM Length = 327 Score = 200 bits (509), Expect = 7e-50, Method: Composition-based stats. Identities = 73/323 (22%), Positives = 139/323 (43%), Gaps = 21/323 (6%) Query: 1 MK-KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSP 59 M K + +DLNLL+ LQ+L++ER+V++AA+R+ +T A+SK+L++LRA FDD LF S Sbjct: 1 MNTKELAKIDLNLLISLQVLLEERNVSRAAERLFITQPAMSKTLSRLRAVFDDALFTRSS 60 Query: 60 LGLSPTPLMVSMEQNLAEWMQMSNLLLD-KPHHQTPRGLKFELAAESPLMMIMLNALSKQ 118 G+ PTP + + L E + L+ + + + LA + + +L L+K+ Sbjct: 61 HGMQPTPRALELTDRLTEILSGIGQLVSKQAFNPALIDTEITLALSEYIGVALLPTLAKR 120 Query: 119 IYQRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSD 178 + + P +++ + L+ + G++D R H L S Sbjct: 121 LQMQAPNLHLRIVTRVENQLEQLALGKLDFAVHIRHQH---------YSPDFRTIDLGSS 171 Query: 179 VPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWAL---DNVLQELGRERTIAMSL 235 P + +R++HP +L YP + + + + +++ LG ++ + Sbjct: 172 PPVLLIRENHPLQAGNISLADLANYPVVRLYVSDREQLQVKAGEDLFDGLGTNTRGSLEI 231 Query: 236 PEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWH 295 ++ + D +L A Q + H + + V + L H Sbjct: 232 SHLMTAMEVLRNTDYYMLGPA-FLTQNESISHGIT------ALPVPRTGNSSVNYVLAAH 284 Query: 296 KRNSHNPKIVWLRETIKNLYASM 318 +R ++P WL E I + Sbjct: 285 QRTENSPLHNWLWEEITCTIREL 307 >UniRef50_C6IVL6 Transcriptional regulator YwqM n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6IVL6_9BACL Length = 302 Score = 200 bits (509), Expect = 7e-50, Method: Composition-based stats. Identities = 51/312 (16%), Positives = 100/312 (32%), Gaps = 19/312 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++ L ++++ S T+AA++++ S+V+ + L A PLF + T Sbjct: 1 MESRHLFTFLVVVEAGSFTRAAQQLDYAQSSVTAQIQALEAEIGLPLFDRIGRKIVLTDA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQAT 127 + E ++ + + H ++ A L L + + QRYP Sbjct: 61 GRRLLPYAQEIAKIHEMAKNALHPAAEMAGSLKIGAPESLAAFRLPEVIRHYRQRYPLVQ 120 Query: 128 IKLRNWD-YDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRK 186 I L+ ++ D + GE+D+ F + + E L + + Sbjct: 121 IVLKPGQCWELRDLVRSGELDVAFLLQPEVE---------DRDLQIETLVHEPMALVAPA 171 Query: 187 DHPALHQ-TWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMA 245 DHP H+ D + S + L G + E Sbjct: 172 DHPLRHEAEVVPDQLKDQTILHTESGCSYRTLFERYLNSHGVFPDPNLEFWSIEAIKQCV 231 Query: 246 AQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIV 305 L ++ P ++L + LV L + V L H++ +P + Sbjct: 232 MS--GLGVSFLP-LVTVRSELAEGKLVKL-----NWNDESQRVATQLALHRKKWRSPALE 283 Query: 306 WLRETIKNLYAS 317 I+ Sbjct: 284 QFVLMIREQAER 295 >UniRef50_D2QVQ4 Transcriptional regulator, LysR family n=22 Tax=Bacteroidetes RepID=D2QVQ4_9SPHI Length = 298 Score = 200 bits (509), Expect = 7e-50, Method: Composition-based stats. Identities = 48/289 (16%), Positives = 98/289 (33%), Gaps = 20/289 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 D L + + S TKAA + VT A++K + +L + LF +S T Sbjct: 2 FDFR-LTVFYTVARRLSFTKAAAELFVTQPAITKHIQELESQLGTALFDRRGNQISLTTA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + ++ M + + + + G + L A S + ++ A+ + +++P Sbjct: 61 GNVLLRHAETIMGVYRQIEFDLNELKGKPGGRLRLGASSTIAQYVIPAVLARFGEQFPDV 120 Query: 127 TIKLRNWDYDSLD-AITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 T+ L + + + ++ A+ E+D+G + + Y D + R Sbjct: 121 TLSLLSGNTEQIEQALLHDEIDLGLVEG----------RTHHSDVRYTPFVKDELVLVCR 170 Query: 186 KDHPALHQ-TWNLDTFLRYPHISICWEQSDTWALDNVLQELGRE---RTIAMSLPEFEQS 241 DHP + LD P + +++ L+ G AM L E Sbjct: 171 ADHPLAGRDEITLDELKTVPLVLREPGSGSREVVEHALRGAGLRLAELQQAMQLGSTEGI 230 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPF 290 + + N+L L L + ++ + Sbjct: 231 KTYLSSSSGMAFV---SIFAVPNELKSGTLRVLDVADLTIERDFYAIQL 276 >UniRef50_A8LCN9 Transcriptional regulator, LysR family n=7 Tax=Actinomycetales RepID=A8LCN9_FRASN Length = 311 Score = 200 bits (509), Expect = 7e-50, Method: Composition-based stats. Identities = 52/312 (16%), Positives = 98/312 (31%), Gaps = 24/312 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L + +ER+ T+AA+R +V+ S VS + +L LF S + TP Sbjct: 1 MELRQLEYFVAVAEERNFTRAAERSHVSQSGVSAQIRQLERDLGAELFDRSGRAATLTPA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + + + L T + + + + L +P Sbjct: 61 GEAALECARAALAATAALRQAVGEVTGLIRGQLTVGMVTGCTVTPLFDALAGFRGAHPGV 120 Query: 127 TIKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + L + D L + G VD+ G + P + + + ++ Sbjct: 121 DVSLLEGNSDQLVSEVRAGTVDLALVGSAAPA---------PEGLGALTIVEERLVAAVQ 171 Query: 186 KDHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 H + L R+P + + D Q I + + + Sbjct: 172 PGHLLAERPRITLRDLCRHPIVCMPPGTGLRTVFDRACQTCDLHPRITLQASAPDAIADL 231 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 L +A + LVALP+ L TL+W R +P + Sbjct: 232 --AGRGLGVAVLSTS---MVAAYGDRLVALPVD-----GLDLPALLTLVW--RAPASPAV 279 Query: 305 VWLRETIKNLYA 316 L + +A Sbjct: 280 RELLAHARRAFA 291 >UniRef50_D2I932 Putative LysR family transcriptional regulator n=1 Tax=Pseudomonas reinekei RepID=D2I932_9PSED Length = 320 Score = 200 bits (509), Expect = 7e-50, Method: Composition-based stats. Identities = 67/310 (21%), Positives = 120/310 (38%), Gaps = 20/310 (6%) Query: 9 DLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLM 68 DLNLL L + + +VT AA+R+ ++ A S +LA+LR D LFV S ++ TP Sbjct: 4 DLNLLRVLLAVHEAGNVTAAAQRLGMSQPAASAALARLRRSLGDALFVRSGQTMAATPRA 63 Query: 69 VSMEQNLAEWMQMSNL--LLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 S+ E + + + L + + F + L L + P A Sbjct: 64 QSIIDRTREVIDIIDRDILSNPVFDPSTSTAPFMFCLSEIGEIAFLPMLLGHLRSVAPLA 123 Query: 127 TI-KLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 I L D + + G+VD+ + I + LFS +R Sbjct: 124 QICSLSLAAKDVDEHLREGKVDLVMGYFPDLGAA---------NIYQQRLFSHDLVCLIR 174 Query: 186 KDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMA 245 H H+ LD F H+ + + ++ L + G +R I + + + + + Sbjct: 175 GGHKIRHEQLTLDEFCTLEHVQVRDGGRNQEMYESYLAKAGVKRNIVLQMGHYMSTASII 234 Query: 246 AQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIV 305 + + L++ Y + + V LP F WH R ++P+ Sbjct: 235 ERSN-LVVVLPRTVASLYAKYANVRSVELPDGFPV-------YDIKQYWHARFQNDPRHQ 286 Query: 306 WLRETIKNLY 315 W+R+T++ L+ Sbjct: 287 WIRQTVRTLF 296 >UniRef50_D1XD48 Transcriptional regulator, LysR family n=2 Tax=Streptomyces RepID=D1XD48_9ACTO Length = 329 Score = 200 bits (509), Expect = 7e-50, Method: Composition-based stats. Identities = 39/304 (12%), Positives = 89/304 (29%), Gaps = 25/304 (8%) Query: 13 LLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSME 72 L + + + VT+AA + V S +S+++ +L LF +S TP + Sbjct: 40 LAYFEAVARHEHVTRAAHELGVPQSTLSRAMVRLEQDLGVALFARRGRTVSLTPAGRTFL 99 Query: 73 QNLAEWMQMSNLLLDKPH-HQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQATIKLR 131 ++ + D P K + + +L + +P+ +L Sbjct: 100 GSVERALAEVEKAADSVRADADPTAGKVAFGFLHTMGSETVPSLIRAFRADHPRVRFQLV 159 Query: 132 NW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPA 190 ++ + G +D+ + + L + + DH Sbjct: 160 QNYGEAMIERLRAGGLDLCLTSPVPDAP----------DLVARRLDEQRLRLVVPDDHRL 209 Query: 191 L-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQPD 249 + L +++ D++ E G +A E E + A Sbjct: 210 AGRRRVRLAEAAEEAFVTLEPGYGLRRITDDLCTEAGFTPRVAFEGEEAETLRGLVAAGL 269 Query: 250 NLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWLRE 309 + L P + +V L + + + W + P + + Sbjct: 270 GVALLPPPAVAR-------PGVVELTVTAPRAV-----REIGVAWLDGHPDTPPVAAFKR 317 Query: 310 TIKN 313 + + Sbjct: 318 FLLS 321 >UniRef50_O33945 Probable cat1 operon transcriptional activator n=9 Tax=Proteobacteria RepID=CATR_ACILW Length = 303 Score = 200 bits (509), Expect = 7e-50, Method: Composition-based stats. Identities = 46/316 (14%), Positives = 101/316 (31%), Gaps = 28/316 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +DL + +ER+ T+AA+++N+ +S+ + L PL + + + T Sbjct: 1 MDLRQFRYFVAVARERNFTRAARQLNIAQPPLSRQIQLLEEEVGVPLLIRNSRPVQLTDA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRGLK-FELAAESPLMMIMLNALSKQIYQRYPQA 126 + + + + + + + +L L +++ Q P+ Sbjct: 61 GRLFFEQAIQVLGRVEQMQAATRRVGLHQRSVLSIGFVASTLYGVLPTLMRKLRQHAPEL 120 Query: 127 TIKLRN-WDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 I++ + AI G +DIGF + + VL + V L Sbjct: 121 DIQMVELMSVQQIQAINEGRIDIGFGR----------VHHSDPNVSSIVLHEERLAVALP 170 Query: 186 KDHPALHQ--TWNLDTFLRYPHISIC--WEQSDTWALDNVLQELGRERTIAMSLPEFEQS 241 + P + + I + N+L + M + E + + Sbjct: 171 MESPMARESTPLPVHQLAGEKLIVYPKEPRPGFADQVLNILDRHDVQPGQVMEVREIQTA 230 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 L + A + P + L+ + V + H+ N + Sbjct: 231 LGLVAAE--FGVCVIPASARQMRHDVHYRLID-------GDRATSPVIVS---HRANDSS 278 Query: 302 PKIVWLRETIKNLYAS 317 I ++ I+ +YA Sbjct: 279 KYISLTKQLIREMYAE 294 >UniRef50_B4CXF3 Transcriptional regulator, LysR family n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CXF3_9BACT Length = 309 Score = 200 bits (509), Expect = 7e-50, Method: Composition-based stats. Identities = 35/297 (11%), Positives = 86/297 (28%), Gaps = 22/297 (7%) Query: 18 LLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSMEQNLAE 77 + + + T+AA++ V+ ++S+ + KL + LF T + + Sbjct: 26 AVARAGNFTRAAEQCRVSQPSLSQQIQKLEEELGERLFDRMKRQTKLTSYGEAFVRRAVR 85 Query: 78 WMQMSNLLLDKPHHQTP-RGLKFELAAESPLMMIMLNALSKQIYQRYPQATIKLRN-WDY 135 ++ + + L + + + +L ++YP + ++ Sbjct: 86 ILEEAEMALREATDAKSLLSGMLTIGVLPTIAPYLLPEAISAFARKYPGVEVVVQEDTTG 145 Query: 136 DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPALH-QT 194 L +T E+D + E+ + + HP +T Sbjct: 146 HLLKHLTTYEIDFAIASNPIEDSRFEIQELFAEELLLAL----------PAGHPLARKRT 195 Query: 195 WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQPDNLLLA 254 I + + + + T++ + E + A L L+ Sbjct: 196 VPASALKGERLIVMREGHCLGDQVLGFCEHREMKPTVSFRSAQLETIYALVAA--GLGLS 253 Query: 255 TAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWLRETI 311 P + + L L + Q + E +W K+ + + Sbjct: 254 LIPAMAAATERANALELRS-------IQAPRPERKILAVWPKQRPLGRAARVFLDLM 303 >UniRef50_A8KZI9 Transcriptional regulator, LysR family n=4 Tax=Actinomycetales RepID=A8KZI9_FRASN Length = 310 Score = 200 bits (509), Expect = 7e-50, Method: Composition-based stats. Identities = 72/313 (23%), Positives = 125/313 (39%), Gaps = 20/313 (6%) Query: 6 TTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPT 65 ++LDLNLL+ L L++ERSV AA+R+ +T SAVS++L +LR DDP+ V + + PT Sbjct: 8 SSLDLNLLVALDALLEERSVNAAARRLRLTESAVSRALGRLRRAMDDPVLVRAGHRMVPT 67 Query: 66 PLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQIYQRY 123 P ++++ + ++ ++ + F + A L + L ++ + Sbjct: 68 PRALAVQAEVHALVERAHAVFTPIREPDLATLARTFTILASDALTTAIGVDLLDRLTRDA 127 Query: 124 PQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVW 183 P ++ + D + G D+ + S I EVL + Sbjct: 128 PGVRVRFLPEPSATDDPLRDGTADLEIG----------DIDSTSPEIHIEVLGEEQALAV 177 Query: 184 LRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 +R HP + H++ LD VL G RT+A+S+P +L Sbjct: 178 VRAGHPLTRGRLTPERLAAARHVTASRRGRFAGPLDEVLAARGLRRTVAVSVPSHSAALL 237 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 + A D + L A R + L + L L + WH R + Sbjct: 238 LVAGSDLVGLVPA-RLGRGLLDSLGLVALDLGLDLPT-------LTIAQAWHPRYEADAP 289 Query: 304 IVWLRETIKNLYA 316 WLR +++ Sbjct: 290 HRWLRGHVRDTIR 302 >UniRef50_Q47TZ7 Putative LysR-family transcriptional regulator n=1 Tax=Thermobifida fusca YX RepID=Q47TZ7_THEFY Length = 305 Score = 199 bits (508), Expect = 8e-50, Method: Composition-based stats. Identities = 52/271 (19%), Positives = 95/271 (35%), Gaps = 12/271 (4%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 LDL L L + + S++ AA+ ++ T AVS +A+L A PL V G+ T Sbjct: 2 LDLTRLRVLCEVARLGSMSAAARALSYTQPAVSHHIARLEAEVGTPLVVRHGRGVRLTEA 61 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + + + ++ + LAA ++ + +R P Sbjct: 62 GRVLVGHAEAVLARLDTAEEEVAAIAGLRAGRVSLAAFPTATAGIVPQALATLRERAPDV 121 Query: 127 TIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + L +SLD + GEVD+ + I L + + L Sbjct: 122 AVTLVEAEPPESLDLLREGEVDVTLAFSYDETP-----PDASTGIREVTLCREQVRLLLP 176 Query: 186 KDHPALHQ-TWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 DHP + T L + ++ C L +V + G E IA + + + Sbjct: 177 GDHPLAAEHTLELAALRKETWVAGCERC--RSHLVHVCRRAGFEPRIAYTTDDHLAVQRL 234 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALP 275 + + P+ +Q + +V P Sbjct: 235 V--SLGMAVGVLPQLALLLHQGENVAVVDSP 263 >UniRef50_B8DQG2 Transcriptional regulator, LysR family n=6 Tax=Bacteria RepID=B8DQG2_DESVM Length = 337 Score = 199 bits (508), Expect = 8e-50, Method: Composition-based stats. Identities = 43/310 (13%), Positives = 88/310 (28%), Gaps = 18/310 (5%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L + +E +AA+R++V+ +S+ + L LF + + TP Sbjct: 1 MELRQLRYFLAVAEELHFGRAARRMHVSQPPLSQQIQALEEELGVRLFDRTSRTVRATPA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHH-QTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 ++ ++ + + + +++ + L R P Sbjct: 61 GEALRDDVRDLLAGLDAAVERARGTARGERGRLRLGFVVSAAATRFPRAVAAYRARCPGV 120 Query: 127 TIKLRNWDYDS-LDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 ++LR L I GE+D+G L LP D+ + V L Sbjct: 121 RLELREMGTLLQLRRIESGELDVGLLRN---------LDGLPEGFDHAPFLHEPQVVALP 171 Query: 186 KDHPALH-QTWNLDTFLRYPHISICWE--QSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 HP L P I + A+ + G + Sbjct: 172 AHHPLARLGVVPLAALAGVPLILYPRRVFPAAYDAIIAACRGAGFSPEVPQEAVGLNTQR 231 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQL-PLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 + A P + + + VA + L+W + Sbjct: 232 A--LVAAGVGAAIVPASARSEPREGVVYRDVAAGNDVPGGAPGLPYIRLDLVWRAGRD-D 288 Query: 302 PKIVWLRETI 311 + + + Sbjct: 289 ALLRGFLDVV 298 >UniRef50_A1R1P0 Putative transcriptional regulator, LysR family n=1 Tax=Arthrobacter aurescens TC1 RepID=A1R1P0_ARTAT Length = 314 Score = 199 bits (508), Expect = 8e-50, Method: Composition-based stats. Identities = 65/316 (20%), Positives = 130/316 (41%), Gaps = 21/316 (6%) Query: 4 SITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLS 63 ++ +DLNLL+ +LMQER VT+AA ++++T AVS +L +LR FDDPLF S G+ Sbjct: 8 NLRKIDLNLLVVFHVLMQERHVTRAAAKLHITQGAVSAALGRLRLLFDDPLFQKSRTGMV 67 Query: 64 PTPLMVSMEQNLAEWMQMSNLLL--DKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQ 121 PT +++ + + ++ + L+ D+ T F +A L + + + + + Sbjct: 68 PTAKALALAPRIGQSLKTVSDLVFQDEQFEPTTSNRTFHIAMSDDLEAVFVPKIVTEAIR 127 Query: 122 RYPQATIKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 + +A+ +D+ +P A + VLF+ Sbjct: 128 SNWNVKFSFHQTNSVLWQEALDDPRMDLVMCATP---------PQVPAAYHHSVLFASSY 178 Query: 181 CVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQ 240 L + +L+ + H+ + ++ + +D +L+ G ER S+ F Sbjct: 179 TCLYDGQRMKLSEPLSLEDYAGSGHLRVSYD-AQRGFVDEILESQGYERKAVASISHFAG 237 Query: 241 SLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 ++ + D + + ++ L + P+P +L+W Sbjct: 238 AVAVLRAADLIA-TIPTYTAKAFSDAAGLTMSQPPVPMP-------RFTISLIWEVPKET 289 Query: 301 NPKIVWLRETIKNLYA 316 P+ VWLR+ ++ Sbjct: 290 QPEHVWLRKMMQACAN 305 >UniRef50_D0SSL1 Transcriptional regulator n=2 Tax=Acinetobacter RepID=D0SSL1_ACILW Length = 302 Score = 199 bits (508), Expect = 8e-50, Method: Composition-based stats. Identities = 39/313 (12%), Positives = 100/313 (31%), Gaps = 26/313 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L + +E + +KAA ++ ++S+ + L L + + T Sbjct: 1 MELRHLRYFITVAEELNFSKAALKLYTAQPSLSQQIKDLEEDVGVKLLNRTKRKVELTEE 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRGLK-FELAAESPLMMIMLNALSKQIYQRYPQA 126 + + ++ + + + + M + + + + Sbjct: 61 GAVFLEQARLTLAQADKAVAMARQVSQAKQQMLRIGFVPVAEMKIFPYILPNLRVQNSDL 120 Query: 127 TIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 I+L + + + + + +G++D+ F+ + I+ + + + L Sbjct: 121 KIELLSLNNNEQMRLLKKGDLDLTFTRHNFNSD----------EIESQFVIREPLIFLLP 170 Query: 186 KDHPALH-QTWNLDTFLRYPHISICWEQSDT--WALDNVLQELGRERTIAMSLPEFEQSL 242 KDHP + + I EQS T A+ + + G E I ++ Sbjct: 171 KDHPLAKYERIPVKALNGIDFIIPSAEQSLTLNQAILDFAKANGIELNIVQKADNILFNI 230 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 L P Y + + L + + + +HK N+ + Sbjct: 231 NSI--GMGLGCTILPGYIAPLT-MDNTVIRPLDVELPY-------LDLYVSYHK-NNKSY 279 Query: 303 KIVWLRETIKNLY 315 + E + ++ Sbjct: 280 VVSKFLELLTRVF 292 >UniRef50_Q12BV9 Transcriptional regulator, LysR family n=5 Tax=cellular organisms RepID=Q12BV9_POLSJ Length = 323 Score = 199 bits (508), Expect = 8e-50, Method: Composition-based stats. Identities = 49/314 (15%), Positives = 104/314 (33%), Gaps = 22/314 (7%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 ++ ++L L + E +AA R+N+T +++++A L A LF + + Sbjct: 23 RNPPLIELRLWRQFAAVADELHFGRAALRLNMTQPPLTQAIAHLEALLGLKLFDRTKRSV 82 Query: 63 SPTPLMVSMEQNLAEWMQMSNLL-LDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQ 121 T ++ + + + L + + LA S + +L + + Sbjct: 83 QLTAAGAALLPEARDLLARAQALPVYARATADGEAGRLRLAFVSTVGFDLLPGWVRTFRE 142 Query: 122 RYPQATIKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 RYP+ ++L D L A+ RGE+D GF P + + D Sbjct: 143 RYPKVQLELIEATGDVQLQALERGEIDAGFMLHSPG--------FAPPGLTCRRISQDPL 194 Query: 181 CVWLRKDHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQ---ELGRERTIAMSLP 236 + + + + ++ L L P + D + G +A Sbjct: 195 VLAVPEQSVLVGKSGLVLQDLLEQPLVIF-PRHILPSLYDAIFAMYHAAGHLPRVAQEAI 253 Query: 237 EFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHK 296 + + + + + L +A P + + Q + L Q +L+W Sbjct: 254 QMQTIVNLVSA--GLGVAWVPDSVRQF-QRPGVVYREL---KRGKGQVVPGCETSLVWAA 307 Query: 297 RNSHNPKIVWLRET 310 +P + Sbjct: 308 GA-ASPALQRFMAF 320 >UniRef50_A6V8B0 Transcriptional regulator, LysR family n=10 Tax=Proteobacteria RepID=A6V8B0_PSEA7 Length = 310 Score = 199 bits (508), Expect = 8e-50, Method: Composition-based stats. Identities = 71/313 (22%), Positives = 125/313 (39%), Gaps = 24/313 (7%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 ++ LDLNL +++ +ER++T+AA ++++ SAVS +LA+LR DPLFV G++P Sbjct: 10 LSRLDLNLFRVFEVVYRERNLTRAAALLHLSQSAVSHALARLREQLGDPLFVRQGRGVAP 69 Query: 65 TPLMVSMEQNLAEWMQMSNLLLDKPHHQTPR--GLKFELAAESPLMMIMLNALSKQIYQR 122 TPL + + + + + + PR F L L ++L + Q Sbjct: 70 TPLAERLAPGIRDALAGLQRSVARCQSFDPRHDARTFLLNMPEQLEPLVLPDFLGHLRQV 129 Query: 123 YPQATIKLRNWDYDSLD-AITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPC 181 PQ ++ + + L + G +D E+ A+ + L D Sbjct: 130 APQVEVRCSSLHWAELKTELEAGRIDAAV----------EVARPTDAALRRQPLLEDRLW 179 Query: 182 VWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQS 241 V P + + +L H+++ + D L +LG R + + + Sbjct: 180 VMAG---PEFAGELSAERYLAAAHVAVTSRRRGICIEDLALGQLGLTRKVRQRCQHYLSA 236 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 + AQ LL RY + N+ L+ +PL V L W ++ Sbjct: 237 ALLVAQG-GYLLTLTRRYAELLNRGLGNRLLPMPLALPA-------VALNLYWSRQADAE 288 Query: 302 PKIVWLRETIKNL 314 P WLR + L Sbjct: 289 PGGRWLRGELMEL 301 >UniRef50_Q3A916 Transcriptional regulator, LysR family n=1 Tax=Carboxydothermus hydrogenoformans Z-2901 RepID=Q3A916_CARHZ Length = 302 Score = 199 bits (508), Expect = 8e-50, Method: Composition-based stats. Identities = 47/311 (15%), Positives = 110/311 (35%), Gaps = 23/311 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L + + RS TKAAK +++T A+S + + ++ LF S G+ TP Sbjct: 1 MNLYQFELFCQIAKVRSFTKAAKLMHLTQPAISAQVQAMENFYGTKLFERSATGVKLTPA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + ++ L + + + A S + L ++YP+A Sbjct: 61 GELVYKYAQHFLAEHEKLEREIDNLLGTNAQTIVIGASSTIGNFALPCNVWSFKEKYPEA 120 Query: 127 TIKL-RNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 I++ + +D + +VD G + ++ + + + Sbjct: 121 NIRIEVDNSKKVIDMVMEDKVDFGLAEGPE---------FTHPDLEVKKVGESQVVIITS 171 Query: 186 KDHPALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGR---ERTIAMSLPEFEQS 241 + P + ++ + P I S + +++ G E I + L F+ Sbjct: 172 PELPLARQDSITVEELKKLPLIMREPGSSVREVFFDAIKKAGVPAKELNIVLELGSFQGV 231 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 L + + ++ + +++ L + + +L +PF L++ K + + Sbjct: 232 LEAVKKGHGVSISCLEAIKKEFHRKE--------LHYLTLKDMELTMPFLLVYRKDRAFS 283 Query: 302 PKIVWLRETIK 312 P I Sbjct: 284 PLAKRFLRFII 294 >UniRef50_Q0B1J5 Transcriptional regulator, LysR family n=1 Tax=Burkholderia ambifaria AMMD RepID=Q0B1J5_BURCM Length = 321 Score = 199 bits (508), Expect = 9e-50, Method: Composition-based stats. Identities = 72/314 (22%), Positives = 135/314 (42%), Gaps = 23/314 (7%) Query: 6 TTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPT 65 L L L+ + R++T+ A R+ ++ SAVS + + R LFV + G++PT Sbjct: 24 HNWTLAELRAFCLVCECRNLTQVALRLEMSQSAVSLMVQRWRLALGTTLFVRTRYGVTPT 83 Query: 66 PLMVSMEQNLAEWMQMSNLLLDKPHHQTP--RGLKFELAAESPLMMIMLNALSKQIYQRY 123 +++ L ++ +L L P F L ++ L L+ + Q Sbjct: 84 DAAMALRDKLHPLLEGMSLALANSRGFDPKTSERVFRLHMSDIGQLVFLPGLNSFLAQHA 143 Query: 124 PQATIKLRNWDYDSLDA-ITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCV 182 P +++RN +++L+A ++ GEVD+ L + + VL + Sbjct: 144 PGIRLQIRNLAWEALEAGLSAGEVDVAIGS----------LPMIKGRVSSRVLRKERYVT 193 Query: 183 WLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 +R+ HP + +L F H++I S +++V++ G +R I++++P F + Sbjct: 194 AMRRRHPLAKRALDLAAFAAAEHMAIDATSSGHSLVESVMRSKGMQRRISLTMPHFLAAE 253 Query: 243 FMAAQPDNLLLATAPRYCQY-YNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 + D LL T P + L +V PL L WH+R+ + Sbjct: 254 RILGSSDYLL--TVPEVAVMSFRDPSALHIVPTPLELPT-------FDIRLHWHERSRQD 304 Query: 302 PKIVWLRETIKNLY 315 +I WLR +I +L+ Sbjct: 305 QEIKWLRASITSLF 318 >UniRef50_D0DE94 Transcriptional regulator, LysR family n=1 Tax=Citreicella sp. SE45 RepID=D0DE94_9RHOB Length = 314 Score = 199 bits (508), Expect = 9e-50, Method: Composition-based stats. Identities = 67/300 (22%), Positives = 109/300 (36%), Gaps = 17/300 (5%) Query: 22 ERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSMEQNLAEWMQM 81 E SV AA+R+ ++ SA+S++LA+LR DPL V + G+ TP ++ + + Sbjct: 18 EGSVVDAARRLGLSASAMSRTLARLRDATGDPLLVRAGRGMVLTPHAEALRERVPHLAAE 77 Query: 82 SNLLLDKPH---HQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQATIKLRNWDYDSL 138 +L F + A + L + + +R P I D Sbjct: 78 VEAVLRPAETTLDPESLQRDFVIRANDGFIAAYGATLLRLVRERAPAVRILFVQKDASPA 137 Query: 139 DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPALHQTWNLD 198 A+ G D+ +L + + L +D +R HP Q Sbjct: 138 RALRDGLCDLELG----------ILRDTAPELKVQRLLTDHFVGVVRAGHPLAGQDITAR 187 Query: 199 TFLRYPHIS--ICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQPDNLLLATA 256 F I + T +D L +G +R +P F +L MA Q D L+A Sbjct: 188 DFAESDSIVSILHQPADFTHVVDRALAGIGLKRRRTFQVPSFLVALSMAQQSD--LVAVV 245 Query: 257 PRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWLRETIKNLYA 316 P+ + L E E+ +L+WH R +P WLRE ++ Sbjct: 246 PQSYARMERRRMAALGLPGPEIFELPFDTGEIVISLIWHPRMDSDPANRWLRELVRECTR 305 >UniRef50_Q8XFS3 Probable transcription regulator protein n=1 Tax=Ralstonia solanacearum RepID=Q8XFS3_RALSO Length = 306 Score = 199 bits (508), Expect = 9e-50, Method: Composition-based stats. Identities = 37/267 (13%), Positives = 76/267 (28%), Gaps = 16/267 (5%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +DL L +L + +AA R+++ +S + L LF + + T Sbjct: 1 MDLRRLRYFVVLAETLHFGRAALRLSIAQPPLSHQIRVLEEELGARLFDRNNRRVELTAA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMI-MLNALSKQIYQRYPQ 125 +++ + + + + S + ++ L + +P Sbjct: 61 GMALLPEARALLAQAEKASTIAARVERGELGELRIGFTSAAALTQVIPRLILAYRRDWPG 120 Query: 126 ATIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 + +R + L A+ +D F LP A LF D V L Sbjct: 121 VRLSIRELTTQEQLTAMLERRLDFAFVRG-------TAAPDLPPAFGAVRLFEDAFVVAL 173 Query: 185 RKDHPAL--HQTWNLDTFLRYPHISICW--EQSDTWALDNVLQELGRERTIAMSLPEFEQ 240 HP + + P + + ++ + G + Sbjct: 174 PPQHPCADNDGSLFVKALANEPFVMYPPESGTGAYEQVLSLCRHAGFAPQVVQEALSAAT 233 Query: 241 SLFMAAQPDNLLLATAPRYCQYYNQLH 267 + + A L +A P Q Sbjct: 234 MVGLVAA--GLGVALVPESFQRIEASG 258 >UniRef50_B1YXM2 Transcriptional regulator, LysR family n=3 Tax=Burkholderia cepacia complex RepID=B1YXM2_BURA4 Length = 302 Score = 199 bits (508), Expect = 9e-50, Method: Composition-based stats. Identities = 45/308 (14%), Positives = 101/308 (32%), Gaps = 20/308 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++ LL + + S++ A+R++V+ AV++ + +L LF P G++ T Sbjct: 1 MNFTHLLAFYEVARAGSISAGAERLHVSQPAVTREVRELEDRLGIVLFDRMPRGVALTEG 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + + +++ + ++ A L + + R+P+ Sbjct: 61 GKLLYEYASRIFTLADTAEKELAELAGLGSGHMKIGASGTLGVFFVPEAIAAFNARHPRV 120 Query: 127 TIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRK 186 I L + + + G D+ F+ + + SD V Sbjct: 121 AIDLTVTNT---ERVEAGLHDLSFTIGFIEG------PFDDSILHARRIGSDEIAVVAAA 171 Query: 187 DHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAA 246 HP + I ++ + G E MS+ E M Sbjct: 172 GHPLAGTKVRARDLVDRTVIMREPGSGTRAIIEESYRRAGLEIEPLMSVSHTEAIKRMLL 231 Query: 247 QPDNLL-LATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIV 305 L ++T + +L +V + + ++ P ++W K S +P Sbjct: 232 SQHALAYISTL--SVADELRRGELAIVEV-------EDMRIVRPLHMVWAKGRSLSPSSQ 282 Query: 306 WLRETIKN 313 L + + + Sbjct: 283 ALFDLVAS 290 >UniRef50_B1I114 Transcriptional regulator, LysR family n=1 Tax=Candidatus Desulforudis audaxviator MP104C RepID=B1I114_DESAP Length = 296 Score = 199 bits (508), Expect = 9e-50, Method: Composition-based stats. Identities = 41/311 (13%), Positives = 98/311 (31%), Gaps = 24/311 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L+ L ++ + +S ++AAK +++T AVSK ++ L A + L + + T Sbjct: 1 MNLSYLETFVMVAKHKSFSRAAKTLSLTQPAVSKHISLLEAHYGTKLVNRTSRRVELTDA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + + ++ + + + A + +L + + YP Sbjct: 61 GIVLYHFAGRIIATMERAKEEIVSFSEEVKGRLSIGASTIPGHYILPRILSDFKKEYPLV 120 Query: 127 TIKL-RNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + L + ++ + + +G G I+ SD + + Sbjct: 121 NVSLEVSNTGKVINRLQEEAIQVGVIGAPVDSP----------EINCTEFSSDEVVLIMP 170 Query: 186 KDHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGR---ERTIAMSLPEFEQS 241 +DHP + + D + + + ++ L IA E Sbjct: 171 RDHPLVFRKELVTDDLVGEKVVVRENDSGTRRIVEEKLAAADIPLDSLQIAGEFGSTEAV 230 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 L L ++ R+ L + Q + +++ + S + Sbjct: 231 LAAVEA--GLGISFVSRWAAEKVALEG------RIVMRTLQDLRFSRSLYIIYLRDRSLS 282 Query: 302 PKIVWLRETIK 312 IK Sbjct: 283 RPTHAFLSFIK 293 >UniRef50_Q46Q42 Regulatory protein, LysR:LysR, substrate-binding n=1 Tax=Ralstonia eutropha JMP134 RepID=Q46Q42_RALEJ Length = 297 Score = 199 bits (508), Expect = 9e-50, Method: Composition-based stats. Identities = 48/308 (15%), Positives = 90/308 (29%), Gaps = 24/308 (7%) Query: 7 TLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTP 66 L + L L R+ T+AA+ +++ SA S + L LF + + + Sbjct: 2 NLSVKHLRAFVALATHRNFTRAARACHLSQSAFSALVQTLEEQAGSRLFERTTRHVELSA 61 Query: 67 LMVSMEQNLAEWMQMSNLLLDKPHH-QTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQ 125 + E+ + + R + +AA + L L QRYP Sbjct: 62 DGMRFEETARRLLGDFEAAFEDLRAHAERRKGRVSIAALPSIAGGDLPPLLAAFRQRYPG 121 Query: 126 ATIKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 ++L + D +D + RG D + + E L D + Sbjct: 122 IALELFDQLADGCIDLVRRGRADFALAPAPVQ----------DDDLRVEPLVHDTFHLVC 171 Query: 185 RKDHPALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 H + P I + S LD L + + M + Sbjct: 172 PTTHVLARKRRITPQMLAGQPFIHLSRTSSVRQHLDAAL--HPLKLSSVMEVEHLATVAA 229 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 + L ++ P + Q L + L Q L L+ + + Sbjct: 230 LVQA--GLGVSVVPSLALFQFQRDGLAVRPL-------QMPSLVRDICLVRLRDRGDSAA 280 Query: 304 IVWLRETI 311 + + + Sbjct: 281 AAAMIDCL 288 >UniRef50_Q2GAY9 Transcriptional regulator, LysR family n=1 Tax=Novosphingobium aromaticivorans DSM 12444 RepID=Q2GAY9_NOVAD Length = 308 Score = 199 bits (508), Expect = 9e-50, Method: Composition-based stats. Identities = 57/316 (18%), Positives = 113/316 (35%), Gaps = 28/316 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +DL L + RS ++AA+ +N+ +S+++ L LF + L+ TPL Sbjct: 1 MDLRQLRQFLAVANARSFSRAAETLNIAQPPLSRTIRHLEEEIGGALFDRTARPLAMTPL 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKP-HHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + + + + D +F + + + L L + +R P Sbjct: 61 GQLLHEQARQILDRMGDMHDMMKAAAATERRRFTIGFVASTIYARLPELIRAFRKRAPDV 120 Query: 127 TIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + L + L A+ G +D+GF + AI +L ++ V L Sbjct: 121 ELTLVESSTLEQLAALKDGRIDVGFGR----------IRFEDPAIKRIILRNERLAVALP 170 Query: 186 KDHPAL--HQTWNLDTFLRYPHISIC--WEQSDTWALDNVLQELGRERTIAMSLPEFEQS 241 +DHP + L P I S + ++ ++ G E IA E + + Sbjct: 171 RDHPLALDDRPLTLKQVAAEPQILYPRAPRPSYADQVISLFRDHGLEPRIAHEARELQIA 230 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 + + A + L A P ++ H + L H+ N + Sbjct: 231 IGLVAAEEGL--AIIPESISR-SRSHDVVYRELAEAATSPIIMS---------HRMNDSS 278 Query: 302 PKIVWLRETIKNLYAS 317 ++ + + I + YA+ Sbjct: 279 AELRLMAQVIASEYAA 294 >UniRef50_Q4KKE5 Transcriptional regulator, LysR family n=27 Tax=Proteobacteria RepID=Q4KKE5_PSEF5 Length = 308 Score = 199 bits (508), Expect = 9e-50, Method: Composition-based stats. Identities = 64/298 (21%), Positives = 118/298 (39%), Gaps = 19/298 (6%) Query: 22 ERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSMEQNLAEWMQM 81 E SV AA+R+N++P+A+S++L ++R DP+ V + GL PTP + + + + ++ Sbjct: 18 EGSVVGAARRMNLSPAAMSRTLTRIRDALGDPVLVRAGRGLVPTPKALELRSQVRDVVEQ 77 Query: 82 SNLLLDKPH--HQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQATIKLRNWDYDSLD 139 + L+ +F + A + + L + ++ P ++ + Sbjct: 78 AALVFRSADKVDLGSLQRRFNVRANDFFVGVYGGRLIDTLERQAPLCELRFVPEGDGDDE 137 Query: 140 AITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPALHQTWNLDT 199 A+ G +D+ S + + LF+ +R+ HP L + + Sbjct: 138 ALREGRIDLRISNTRPLTP----------EVKVQNLFTTAFVGLVREGHPLLDEDITAER 187 Query: 200 FLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQPDNLLLATAPRY 259 F +PHIS+ +D L E G ER + + P F ++FM D +L Sbjct: 188 FAAFPHISMSRRGIARGPIDAALAEQGLERRVPLIAPSFHAAMFMLPDSDLILPVPQETL 247 Query: 260 CQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWLRETIKNLYAS 317 +L LP+ T WH R +P W RET++ + Sbjct: 248 LSVSRLGLRLRSFVLPISLPTLV-------LTQAWHPRYDKDPAHKWFRETLRTSCQA 298 >UniRef50_B4T1W6 LysR family regulatory protein n=58 Tax=Enterobacteriaceae RepID=B4T1W6_SALNS Length = 295 Score = 199 bits (508), Expect = 1e-49, Method: Composition-based stats. Identities = 46/304 (15%), Positives = 101/304 (33%), Gaps = 24/304 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +D+ L +++++S T+AA+++ VT +SK L L + L + L T Sbjct: 1 MDIRTLRYFVEVVRQQSFTRAAEKLFVTQPTISKMLKNLEDELNCTLLIRDGRKLLLTDT 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + + L + L + M ++ QRYP Sbjct: 61 GRVVFERGLAILAEFRQLEAELSDINHLNKGVLRLGIPPMVGM-LMAGPISLFRQRYPGV 119 Query: 127 TIKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 +K+ + ++ A+ GE+D+ + S + LFS CV + Sbjct: 120 ELKISEFGGLTVQQAVMNGELDVAMTALPVEEAS---------GLTTLSLFSHPLCVLVP 170 Query: 186 KDHPALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 + + + +P + + + + L + + + IA+ +++ M Sbjct: 171 RSGQWTTCDSIAPEALAEHPLLIYNEDFALSRQLMTLFSQHDVKPRIAVRSGQWDFLAAM 230 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN-PK 303 + +A P L + L + L ++W + + Sbjct: 231 VQA--GVGIAILPEPICQRLDKATLRWLPL--------ESDLRWQLGMIWREGVYLSHSA 280 Query: 304 IVWL 307 WL Sbjct: 281 RAWL 284 >UniRef50_B5JLL8 Putative uncharacterized protein n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JLL8_9BACT Length = 297 Score = 199 bits (508), Expect = 1e-49, Method: Composition-based stats. Identities = 42/270 (15%), Positives = 92/270 (34%), Gaps = 13/270 (4%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++ N L C + +E+S T+AAK N++ ++S +AKL + LF+ P G+ + Sbjct: 1 MEFNQLKCFLAVAREQSFTRAAKACNLSQPSLSYQIAKLEEELGESLFIRKPKGVELSEP 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPH-HQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + ++ + + + +L L K + YPQ Sbjct: 61 GKLLLDGAHRIREEQEKIVSTFRTREKLMAGEVRFGIIPTIAPYLLPPLMKAFRREYPQI 120 Query: 127 TIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + +R + + GE++ + P ++ ++ LF + + + Sbjct: 121 RLIVRESRTSQLVKEVVDGELEFAVVSDIAQPLLKK------YSLHLNKLFEEELLLAVP 174 Query: 186 KDHPA-LHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 HPA + + I + + Q G + + ++ + L M Sbjct: 175 NAHPACALPELRVQSIDESELILLSEGNCLRDQTMQLCQR-GDKLS-SLVCEQLPTQLAM 232 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVAL 274 L +A P +L + Sbjct: 233 V--SGGLGVAIVPEMAVKNASSAELTFLHF 260 >UniRef50_D0IWI0 Transcriptional regulator, LysR family n=3 Tax=Comamonadaceae RepID=D0IWI0_COMTE Length = 304 Score = 199 bits (508), Expect = 1e-49, Method: Composition-based stats. Identities = 44/312 (14%), Positives = 94/312 (30%), Gaps = 28/312 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +DL L ++++ T+AA+ ++VT +SK + L F L + G+ T Sbjct: 1 MDLRALRYFIEVVRQNGFTRAAETLHVTQPTISKMVKALEDEFGGRLLLREGRGVQLTDA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTP-RGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + E ++ + LL + L M + QRYP Sbjct: 61 GQVVYDRGMEILEQAQLLRRQVAEVDHITRGDLSLGIMPTTGHYMAP-VIALFQQRYPGV 119 Query: 127 TIKL-RNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 +++ I G++D+ L ++ A++ + V L Sbjct: 120 NLQVNEQGARAQYQLIQEGKLDMALG----------LFAAPDPALERYTVARQKTRVVLP 169 Query: 186 KDH---PALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 P Q P + + + + + G + + ++ Sbjct: 170 AQQVTDP--GQPMRWSDLRELPFVLYTSDFALHEHVLQQCEAAGFTPQVKLQTRYWDFIG 227 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 + A + + +Y + + PL E + L+W Sbjct: 228 HLVAAQVGVAVMFEHVIARY----DPQRVASRPLVEPE-----IPWDVALMWRPGYLSRA 278 Query: 303 KIVWLRETIKNL 314 WL ++ + Sbjct: 279 AQAWL-NCVREV 289 >UniRef50_B3QAJ4 Transcriptional regulator, LysR family n=4 Tax=Alphaproteobacteria RepID=B3QAJ4_RHOPT Length = 316 Score = 199 bits (507), Expect = 1e-49, Method: Composition-based stats. Identities = 69/313 (22%), Positives = 131/313 (41%), Gaps = 18/313 (5%) Query: 4 SITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLS 63 ++ LDLNLL L+ L++ R+VT AA+ + ++ A+S++L++LR+ DPL V GL Sbjct: 5 NLAGLDLNLLPPLEALLRRRNVTHAAQDVGLSQPAMSRALSRLRSLLADPLLVRGHHGLV 64 Query: 64 PTPLMVSMEQNLAEWMQMSNLLLDKPH-HQTPRGLKFELAAESPLMMIMLNALSKQIYQR 122 TP ++ L+ + L + +AA +++ L ++ + Sbjct: 65 LTPKAQALVPLLSVAVADLKDLFRERRFDPATEQRTIRIAASDNQTVLLAPPLMARLARE 124 Query: 123 YPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCV 182 P ++ + D + + G +D F+ + LP + D + Sbjct: 125 APGIDLRFELYRADLRERMESGALDFAFA---------LATTDLPPGAVSMPIADDRLAL 175 Query: 183 WLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 +R+ HP +TW + + H+ I LD +L R +A+ P F +L Sbjct: 176 VMRRGHPKAKRTWRISDYADVDHVGIALLDDGRSELDGILAAARVSRRVALVTPHFTAAL 235 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 A D + + + + L + P K+E+P TL+W + +P Sbjct: 236 ATVAATDMV-TTISRALARRFAGAFDLIVKQPPF-------DKVELPMTLVWSHLRNADP 287 Query: 303 KIVWLRETIKNLY 315 +VW RE ++ + Sbjct: 288 LLVWFRELLREIA 300 >UniRef50_A3ZYQ6 Transcriptional regulator, LysR family protein n=1 Tax=Blastopirellula marina DSM 3645 RepID=A3ZYQ6_9PLAN Length = 293 Score = 199 bits (507), Expect = 1e-49, Method: Composition-based stats. Identities = 39/309 (12%), Positives = 93/309 (30%), Gaps = 25/309 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L+ L + + SV+ A+++ ++ A SK L + LF + GL T + Sbjct: 1 MNLHHLAIFHEVAETGSVSLGAEQLMISQPAASKQLRDFETALGEKLFDRTGRGLRLTTV 60 Query: 68 MVSMEQNLAEWM---QMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYP 124 + + + + ++ + L A + + +L + + +Q++P Sbjct: 61 GKLLNEYARKIFTLEAEAERVVALVRDVR--RGELFLGASTTIAGYLLPQVLARFHQQHP 118 Query: 125 QATIKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVW 183 + + + + D + VD+G + + + D V Sbjct: 119 EIRVHVSVGNTDFVHRQVLDYRVDLGLTEGFVNEP----------GLTATSFAEDELVVV 168 Query: 184 LRKDHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 HP + + D + + + G E M+L E Sbjct: 169 AAATHPLVKKRRVKADDLSGQSFVLRESGSGTRAVQEQAISMCGVEVREVMTLSSTEAIK 228 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 + A L + + + ++ P L+ + +P Sbjct: 229 HVVAAGVGLAIVSRLSVGAELVSGELCAIR--------LADLQIPRPLHLVQAQDRFASP 280 Query: 303 KIVWLRETI 311 E + Sbjct: 281 AARAFHEAL 289 >UniRef50_UPI0001788565 transcriptional regulator, LysR family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001788565 Length = 295 Score = 199 bits (507), Expect = 1e-49, Method: Composition-based stats. Identities = 42/312 (13%), Positives = 107/312 (34%), Gaps = 24/312 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L + + + +TKA+K +++T A+S +++KL + PLF + + Sbjct: 1 MELTQLEYFLTVSRLQHMTKASKALSITQPALSHAISKLESELGVPLFERNGRNVKLNRY 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQT-PRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + + +Q + + + P ++ + L + ++ AL + +P+ Sbjct: 61 GSMFARWVEQALQDIQNGMQEIEESSNPDTGIISVSYLNILGVDLVPALVRAYQLAHPKV 120 Query: 127 TIKLRNWD-YDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 +L + D + + +G D+ + RES L V+ + + + Sbjct: 121 RFELHQGNLGDIDEHLEKGHSDLMITSRESTIDQHNWL----------VMRTMPLYIVVS 170 Query: 186 KDHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 H ++ +L P + + + + Q G + + Sbjct: 171 SHHRLANRPSLSLMDLSGEPFVGLKHNCGLRATIQSRFQHTGFILSSTYDAEDLATVAGF 230 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 + L ++ P+ + L + + L W + +P Sbjct: 231 IKE--GLGVSVLPKTAGLMLEG---------LSWIPITDEGWFWEIGLKWREDRYLSPAA 279 Query: 305 VWLRETIKNLYA 316 E +++ Y Sbjct: 280 RRFIEYVEHHYQ 291 >UniRef50_P49518 Probable RuBisCO transcriptional regulator n=3 Tax=Bacillariophyta RepID=RBCR_ODOSI Length = 309 Score = 199 bits (507), Expect = 1e-49, Method: Composition-based stats. Identities = 44/312 (14%), Positives = 98/312 (31%), Gaps = 23/312 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 L L L+ + E+S T+AA+ + V+ ++SK + L + + L +S T Sbjct: 5 FTLQQLRILKAIATEKSFTRAAEVLFVSQPSLSKQIKTLESRLNISLLNRENNIVSLTQA 64 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + + + + A + ++ + Q +PQ Sbjct: 65 GKLFLEYSERILALCEESCRVLNDLKTGDRGNLIVGASQTIGTYLMPRVLALFAQNHPQI 124 Query: 127 TIKLR-NWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 I++ + + G++DI G + + E +D + + Sbjct: 125 NIEVHVDSTRKIAKRVLEGDIDIAVVGGNIPEE-------IEKNLKVEDFVNDELILIIP 177 Query: 186 KDHPAL---HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRER---TIAMSLPEFE 239 K HP + N D I++ + +DN+L ++ E I M L E Sbjct: 178 KSHPFALKKKKKINKDDLYHLNFITLNSNSTIRKLIDNILIQIAFEPKQFNIIMQLNSIE 237 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 L A ++ L + + K+ +++ + Sbjct: 238 AIKTAV--SLGLGAAFVSSSAIE----KEIELKT--IEIVTIEDIKITRILSIISNPECY 289 Query: 300 HNPKIVWLRETI 311 + + + Sbjct: 290 RSKAVDLFYNEL 301 >UniRef50_Q0S8J9 Transcriptional regulator, LysR family protein n=5 Tax=Actinomycetales RepID=Q0S8J9_RHOSR Length = 298 Score = 199 bits (507), Expect = 1e-49, Method: Composition-based stats. Identities = 42/311 (13%), Positives = 105/311 (33%), Gaps = 29/311 (9%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++++ + + +E +AA+R++ +S+++ +L LF + + T Sbjct: 1 MEISQITAFLAVAEELHFGRAAQRLHSAQPPLSRTIRQLEKQLGATLFERNTRNVRLTSA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQ-TPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 ++ E + L + + + +++ +K + +P Sbjct: 61 GEALLGPAREILDACRLAEIAVAAAGRGQVGRVRIGFAGVSSHLLIGRWAKLVRHTHPGI 120 Query: 127 TIKLRN--WDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 L + + ++L+ + G +DIG P I V+ ++ V L Sbjct: 121 EFVLDSSAFASEALNKLLDGTLDIGLVRWI----------FTPPGIASRVILNEDFVVAL 170 Query: 185 RKDHPALHQ-TWNLDTFLRYPHISIC--WEQSDTWALDNVLQELGRERTIAMSLPEFEQS 241 DHP + ++ P +++ + +L + G I S P+ Sbjct: 171 PTDHPLAGRDGVRIEELSTEPWVTLPADPGSALRDSLQRAAHDAGFTPRIVQSAPDSMAL 230 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 + + + L + ++ +V LPL + + W + + Sbjct: 231 MALVSAEVGCALTVSS----VAENVNNPDVVFLPL-----VGGPSTLQLRIAWRADDDN- 280 Query: 302 PKIVWLRETIK 312 LRE ++ Sbjct: 281 ---AALREVLR 288 >UniRef50_C6D4H5 Transcriptional regulator, LysR family n=4 Tax=Bacillales RepID=C6D4H5_PAESJ Length = 303 Score = 199 bits (506), Expect = 1e-49, Method: Composition-based stats. Identities = 41/276 (14%), Positives = 87/276 (31%), Gaps = 19/276 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 L+ + L + + S + AA+ +++T AV+ + L +F L S + T Sbjct: 3 LNFHQLHIFYTVAERGSFSAAAQSLHMTQPAVTMQVQSLEDYFGTKLLQRSTKRIDLTEA 62 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQ-TPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 ++ +++ + +L A + +L L Q +P+ Sbjct: 63 GKALMPYARRSIELIRDTDQAMSAFTKQLKGRLQLGASLTIGEYILPRLLGPFGQTFPEI 122 Query: 127 TIKL-RNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 +I + ++ I ++ G + + E + SD + + Sbjct: 123 SISMKVMNTAQIIEEIINHQLTFGLIEAPVN----------HPDMQMEAVMSDELKLIVP 172 Query: 186 KDHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRER---TIAMSLPEFEQS 241 KDHP + LD YP + ++ L+ + I M L Sbjct: 173 KDHPLSKRQKVLLDEVADYPFVVREQGSGTRLVMEEQLKRKKIDPADLKIVMELGSTGAV 232 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLP 277 L ++ + L L +P+ Sbjct: 233 KSAVEA--GLGVSFVSESSVKHEVALGL-LHVIPIE 265 >UniRef50_B8IDW8 Transcriptional regulator, LysR family n=1 Tax=Methylobacterium nodulans ORS 2060 RepID=B8IDW8_METNO Length = 305 Score = 199 bits (506), Expect = 1e-49, Method: Composition-based stats. Identities = 45/319 (14%), Positives = 101/319 (31%), Gaps = 28/319 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +DL L +L +ER +AA+R++++ +S ++ +L LF + ++ TP Sbjct: 1 MDLRQLRYFAVLAEERHFGRAARRLSLSQPPLSHAIRQLEEELGATLFTRTSRQVALTPA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQT-PRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 ++++ +Q + H R + + + L+ + + P Sbjct: 61 GTALQREAKAILQRAADARVLVHDIACGRRGRLRIGFSGSTVYRGLSHILTAMRTEAPDI 120 Query: 127 TIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + LR + ++A+ E+D GF L P +D + ++ L Sbjct: 121 KVALREMNSAEQVEALLHDELDAGFV----------HLRERPEGLDGILFHAEPFVTCLP 170 Query: 186 KDHPALHQT----WNLDTFLRYPHISICW--EQSDTWALDNVLQELGRERTIAMSLPEFE 239 HP L + ++ + + G + + + Sbjct: 171 VGHPMAATPDPSETRLIDLQHEDFVLFSRTVSPDYYESILAICRTAGFLPRVRHEVRHWL 230 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 + A +A P Q +V LP+P Q + +W Sbjct: 231 TVAALVAH--GAGVALVP---QALAGSQLAGVVFLPIPPSPIQSETWC-----VWKASAP 280 Query: 300 HNPKIVWLRETIKNLYASM 318 + ++ + Sbjct: 281 APGILETFLPQVRAAMKDL 299 >UniRef50_A1BA89 Transcriptional regulator, LysR family n=4 Tax=Alphaproteobacteria RepID=A1BA89_PARDP Length = 324 Score = 199 bits (506), Expect = 1e-49, Method: Composition-based stats. Identities = 50/314 (15%), Positives = 97/314 (30%), Gaps = 26/314 (8%) Query: 6 TTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPT 65 + + L L + + + VT+AA+ +N+T SAVS +++ L A F + T Sbjct: 23 SGMTLEQLRIFLAVAERQHVTRAAEALNLTQSAVSAAVSALEARHGVRFFDRVGRRIVLT 82 Query: 66 PLMVSMEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQIYQRYP 124 + + + + + A + L + + +P Sbjct: 83 ETGEAFMAEARAVLDRVETAEMVLEDLSREPRGRLRVHASQTVASYWLPPRLVALREMHP 142 Query: 125 QATIKL-RNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVW 183 ++L + + DA+ G D+G + +V+ D + Sbjct: 143 GIELRLTVSNTTHAADAVQDGGADLGLVEGAV----------AHGGLHRQVVARDRLVLV 192 Query: 184 LRKDHPALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRE---RTIAMSLPEFE 239 + DHP + I + L G +++ LP E Sbjct: 193 MATDHPWAGVEAMPQAGLEAQNWILREPGSGTRSEFETWLAGRGLSIAALPLSLELPSNE 252 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 L A L A + R + + LP E PF+LL + R Sbjct: 253 AVLNAVAASQCLA-ALSQRAVARPAAAGWIRTLPLP---------GAERPFSLLTNPRRY 302 Query: 300 HNPKIVWLRETIKN 313 + L + + + Sbjct: 303 RTRAVQALIDILTD 316 >UniRef50_A8H3B3 Transcriptional regulator, LysR family n=7 Tax=Gammaproteobacteria RepID=A8H3B3_SHEPA Length = 304 Score = 199 bits (506), Expect = 1e-49, Method: Composition-based stats. Identities = 63/322 (19%), Positives = 119/322 (36%), Gaps = 25/322 (7%) Query: 1 MKKSI-TTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSP 59 M ++ D NLL+ + Q RS+T AA + +T VS +L +L+A LFV Sbjct: 1 MGNNMDKRFDFNLLVIFLEVYQLRSITLAADSLGLTQPGVSAALKRLQATLGVELFVREG 60 Query: 60 LGLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNALSKQ 118 G+SPT + + ++ N L + F + + P+M ++ + Sbjct: 61 RGISPTNAAIQLASQVSPAYNTVNSALSNVAGFDKQTPRSFLVYVDEPMMNLLQP--LAE 118 Query: 119 IYQRYPQATIKLR---NWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVL 175 I + + L ++ + D+ + S ++ Sbjct: 119 QDSDMGNCEIMFQLPPIEEERLLQQLSLQKADLAIDVGQLPSLSYSN----------QLF 168 Query: 176 FSDVPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSL 235 + + + RK HP ++ F + HI++ ++ ALD +E+ ER ++ Sbjct: 169 YRESVTMICRKGHPRINGKIGKIQFYQEKHITLQIRRATLTALDFFTEEVIGERKVSCEC 228 Query: 236 PEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWH 295 + + ++ D + + + Y L + P V ++WH Sbjct: 229 HSLLSMMALVSESDCIAIT-SRSIADKYADKFGLQSIEPPF-------NTKPVLHNMMWH 280 Query: 296 KRNSHNPKIVWLRETIKNLYAS 317 KRN NP WLRE + L Sbjct: 281 KRNEFNPAHTWLREKLNQLVKQ 302 >UniRef50_D1PCH2 Transcriptional regulator, LysR family n=10 Tax=Bacteroidales RepID=D1PCH2_9BACT Length = 297 Score = 199 bits (506), Expect = 2e-49, Method: Composition-based stats. Identities = 42/260 (16%), Positives = 85/260 (32%), Gaps = 17/260 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +D L + + S TKAA + ++ A+SK + +L + LF + T Sbjct: 2 IDTR-LKVFRSVATLLSFTKAANELFISQPAISKHIQELEKEYGVQLFDRIGNRIQLTRA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTP-RGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 M + + + L T G + + A + + +L L + + YP Sbjct: 61 GQLMLDHACKIIDAYQNLDFDMKKLTEKSGGELRIGASTTISQYVLPELIAEFRKLYPDI 120 Query: 127 TIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + L + ++ DA+ G +D+G + Y D ++ Sbjct: 121 RLTLLSGNSHEIEDALAAGRIDLGMVEGIKRQPT----------FKYTPFMKDELVAFVH 170 Query: 186 KDHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRE---RTIAMSLPEFEQS 241 +P +L+ + P + + LQE G I M+L E Sbjct: 171 CSNPLAQQDEISLNLLRQTPIVLRELGSGTLDVIQKALQENGIALSDLNIEMNLGTTEGI 230 Query: 242 LFMAAQPDNLLLATAPRYCQ 261 ++ + + + Sbjct: 231 KHFVEHSLSMGIISIRAIYR 250 >UniRef50_B8FI63 Transcriptional regulator, LysR family n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FI63_DESAA Length = 304 Score = 199 bits (506), Expect = 2e-49, Method: Composition-based stats. Identities = 50/318 (15%), Positives = 102/318 (32%), Gaps = 24/318 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +DL L +++ S +KAA+ +N++ VS + L + L SPT Sbjct: 1 MDLWQLHIFTKVVELGSFSKAAQAVNLSQPTVSSHIKDLEDHLNCRLIDRLGRKASPTKG 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + + + + +A + +L + + YP Sbjct: 61 GELLYSFATRLLALRDEAQSAMSSFLGKPTGSLAIAGSNIPGCYVLPKVIGAFSKYYPDV 120 Query: 127 TIKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 +I L+ D S+ + + G V++G G S + + + L D + + Sbjct: 121 SISLKIGDTRSVSEDVIAGTVEMGVVGALSPNKQ----------LTQDKLMDDHLTLIVP 170 Query: 186 KDHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGR---ERTIAMSLPEFEQS 241 HP + ++ + P I + VL + G I+ L E Sbjct: 171 ASHPLAEKEAVSIKSIADAPFIIREQGSGTRKFFEKVLADAGIGLDSLNISGQLGSTEAV 230 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 L ++ L L +L E F L+ H++ + + Sbjct: 231 REAIKA--GLGVSIFSTRAV----LGDLRCGSL--KSIEISDLDFRRSFYLVRHRQRTAS 282 Query: 302 PKIVWLRETIKNLYASMA 319 P + + + +A Sbjct: 283 PLCQYFCDFLTANAHDLA 300 >UniRef50_C8W2B6 Transcriptional regulator, LysR family n=1 Tax=Desulfotomaculum acetoxidans DSM 771 RepID=C8W2B6_DESAS Length = 291 Score = 199 bits (506), Expect = 2e-49, Method: Composition-based stats. Identities = 49/310 (15%), Positives = 100/310 (32%), Gaps = 23/310 (7%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 +T + N L + + S +KA + +N++ AVS+ ++ L LF + Sbjct: 1 MTDIIFNYLRVFHSVARHLSYSKAGEELNLSQPAVSRQISSLEKGLGLDLFTQRGRKVVL 60 Query: 65 TPLMVSMEQNLAEWMQMSNLLLDKPHHQ-TPRGLKFELAAESPLMMIMLNALSKQIYQRY 123 T S+ M ++ + L L +L ++ K+ Y R+ Sbjct: 61 TDAGRSLYDYADRIMGLAQQAGRTLAQYHDLERGEVRLGVSPVLGCYLLPSILKEFYTRF 120 Query: 124 PQATIKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCV 182 P + L+ + I G++D+ I E D + Sbjct: 121 PNIKVSLQLDSGQKLIKRIEDGKLDLALVVGPLESD----------RIHLERYTQDALVL 170 Query: 183 WLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 + F+ YP I+ S +++ L + + M +P+ E Sbjct: 171 VCPPG---EDSPMFNEIFINYPLITREKPSSTRITIEDHLAKYDIRPKLIMEIPDNEVIK 227 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 + + +A P+ LV+ L + + L L+ K H P Sbjct: 228 RLVIT--GIGVAFLPKRAVET------ELVSGALQVVKGEGTALTRWVYLVTAKDQHHCP 279 Query: 303 KIVWLRETIK 312 ++ ++ Sbjct: 280 TLLAFMNFMR 289 >UniRef50_C4DFU1 Transcriptional regulator, COG0583 n=1 Tax=Stackebrandtia nassauensis DSM 44728 RepID=C4DFU1_9ACTO Length = 309 Score = 199 bits (506), Expect = 2e-49, Method: Composition-based stats. Identities = 48/287 (16%), Positives = 93/287 (32%), Gaps = 11/287 (3%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 D N L + +E SVT AA +++ +VS LA+L PL G+ T Sbjct: 2 FDENRLRVFVAVAREGSVTAAAAKLHYAQPSVSHHLARLEEEIGAPLVSRLGRGIRLTEA 61 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + E + + + LAA + ++ + + YP Sbjct: 62 GRLFAERAEEILGRIDAARTELASHAGLVNGHVRLAAFPTALAALVPSAAGAFADAYPGV 121 Query: 127 TIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + L ++ A+ RGEVDI + + + + LF + + Sbjct: 122 DVDLTEAEPPQAIAALRRGEVDICLAFHYGATPPADWEA-----LSVAPLFDEPVYLVTS 176 Query: 186 KDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMA 245 L ++ I+ C + L + + G ++A ++ + Sbjct: 177 PGSSPSGPRDELASYADRRWIAGCAQC--RAHLLSACEASGFTPSVAFETDDYVAVQALV 234 Query: 246 AQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTL 292 AQ + ++T P ++ ++ L LP P Sbjct: 235 AQ--GMGVSTLPGLALRAHRDERVRLDLLPDDRRTVVALTYGAPVAA 279 >UniRef50_B7RU53 LysR substrate binding domain protein n=2 Tax=unclassified Gammaproteobacteria (miscellaneous) RepID=B7RU53_9GAMM Length = 297 Score = 199 bits (506), Expect = 2e-49, Method: Composition-based stats. Identities = 50/306 (16%), Positives = 101/306 (33%), Gaps = 26/306 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +D L L+ + S ++AA+++++T AVSK +A L LF +S T Sbjct: 1 MDTQNLKAFILVAETGSFSQAAEKLHLTQPAVSKRVALLEEQLGTELFDRIGRIISLTEA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTP-RGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 ++ + + + LA + + L + Q +P+ Sbjct: 61 GKALLPQAKSVERALDAAEQSVRDLAGDVAGQLRLATSHHIGLHRLPPVLSSFSQTFPEV 120 Query: 127 TIKLRNWDYDS-LDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 I + D + + I++G+V++ L + ++ D + Sbjct: 121 HIDIDFMDSEQAYELISQGKVELAVVT---------LAPKEQTNVISLPVWQDPLDFMIA 171 Query: 186 KDHPALHQ--TWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 KDH L T +L R+P I + + G + ++++ E Sbjct: 172 KDHELLRSGNTPDLQAMSRHPAILPGLNTYTGQIIKRLFDSHGLQLEVSLATNYLETIRM 231 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 M L PR + + L + +E L++H+ S + Sbjct: 232 M--ASVGLGWTILPRSMRDES-----------LATIDVASVAIERTLGLIYHRGRSLSRA 278 Query: 304 IVWLRE 309 E Sbjct: 279 AKAFIE 284 >UniRef50_B1KHA3 Transcriptional regulator, LysR family n=1 Tax=Shewanella woodyi ATCC 51908 RepID=B1KHA3_SHEWM Length = 305 Score = 198 bits (505), Expect = 2e-49, Method: Composition-based stats. Identities = 69/314 (21%), Positives = 119/314 (37%), Gaps = 24/314 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 LD LL + SV+ AA ++++ S VS L +LR +PLFV S G+ PT Sbjct: 9 LDGRLLRLFLTVFDTGSVSGAADKLDLNQSTVSNGLDRLRRIIGEPLFVRSGRGIIPTQE 68 Query: 68 MVSMEQNLAEWMQMSNLLLDKPH-HQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + E + ++ F +AA I+L L ++ P A Sbjct: 69 ASRLAPLARELLAKFEQFVEAQEYRAEDESRPFVIAANDYERDILLPQLLVKLRLLAPNA 128 Query: 127 TIKLRNWD--YDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 +K+ L+ + +GE+D+ S + + LFSD V+ Sbjct: 129 PLKVLTAGAKETVLEQLRQGEIDLVLSPSIEANVD---------DLKQQWLFSDCDAVFY 179 Query: 185 RKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 + + +L ++ PH + + S +D VL L ER I + + F M Sbjct: 180 DPE--VIKGPIDLAQYVALPHARVVFNYSGRSEIDEVLTGLKLEREIKLEVANFSALSSM 237 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 + L+ T P + L+ + ++ WH+ +H+P+ Sbjct: 238 MRGSE--LVTTLPSRV-------GISLLD-KMAQQTPPISLNDINIYQFWHQAYTHSPRH 287 Query: 305 VWLRETIKNLYASM 318 WLRE +K L + Sbjct: 288 RWLRELVKALAEEL 301 >UniRef50_Q1GEX3 Transcriptional regulator, LysR family n=1 Tax=Ruegeria sp. TM1040 RepID=Q1GEX3_SILST Length = 306 Score = 198 bits (505), Expect = 2e-49, Method: Composition-based stats. Identities = 46/314 (14%), Positives = 103/314 (32%), Gaps = 26/314 (8%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 + L L L +L + +AA+++ ++ ++S +A L PL GL Sbjct: 1 MPELSLRHLRYFAVLSRALQFRRAARQLGISQPSLSLQIAALEEIVGAPLLERRRNGLIL 60 Query: 65 TPLMVSMEQNLAEWMQMSNLLLDK-PHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRY 123 T + + LL++ + L + + +L + K++++ Y Sbjct: 61 TAAGRDVAARAERILADCELLVNASATRRAGLSGTLRLGSSPTIGPYILPQVLKRLHETY 120 Query: 124 PQATIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCV 182 P + +R+ D L+ + G+ D+ + I + LF + + Sbjct: 121 PDFRLIIRDGPSRDLLEDLVAGKHDLILT----------QAPIQRDDIRFHPLFREPLYL 170 Query: 183 WLRKDHPALHQTW-NLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQS 241 + + HP + +S+ + ++ + Q +G + + Sbjct: 171 VVPRGHPLATAGVARRRDLGQEQFLSLNPAYALRRQVEGLAQTVGARMQDDIDGTSLDAI 230 Query: 242 LFMAAQPDNLLLATAPRYCQYYN---QLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRN 298 M A + + P+ + + +V L + LE L W + Sbjct: 231 RQMVA--LGMGVTLMPQSYTRSEIDNRKDDVCVVTL--------KPGLERHIGLAWRVSS 280 Query: 299 SHNPKIVWLRETIK 312 + L E I Sbjct: 281 GNPASFEELAEAIA 294 >UniRef50_B3EBY3 Transcriptional regulator, LysR family n=3 Tax=Proteobacteria RepID=B3EBY3_GEOLS Length = 288 Score = 198 bits (505), Expect = 2e-49, Method: Composition-based stats. Identities = 39/256 (15%), Positives = 89/256 (34%), Gaps = 15/256 (5%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L+ L + S T+ A+R V+ A+S S++KL LF+ + + TP Sbjct: 1 MELHQLKQFVAAAESESFTRGAERAFVSQPALSASISKLEDEMGTQLFIRNKRSVVLTPA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQAT 127 + + + + H L + L + + L +Q + P+ Sbjct: 61 GRKLLKRAKLIIAECAQAKAELKH-HEVQRSLRLGVINTLAIGQVAKLIEQYRRENPEVL 119 Query: 128 IKLRNWDYDSLDAIT-RGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRK 186 + + + D ++ + +D + + EVLFS+ V L Sbjct: 120 LDVTDASQDQIEKLQKEARIDFALTRLVQGKEKKG---------RQEVLFSEPYVVALPL 170 Query: 187 DHPALHQ-TWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMA 245 H + + P I+ + +L+E G + + ++++ + Sbjct: 171 GHHLSGRKEVSFSELAEEPFIARTH-CESRALIGELLKEKGVRLNVVYKTNQDDRAISLV 229 Query: 246 AQPDNLLLATAPRYCQ 261 + +A P++ Sbjct: 230 E--VGVGIAIIPQHYA 243 >UniRef50_Q4ZRN4 Regulatory protein, LysR:LysR, substrate-binding n=15 Tax=Proteobacteria RepID=Q4ZRN4_PSEU2 Length = 325 Score = 198 bits (505), Expect = 2e-49, Method: Composition-based stats. Identities = 47/311 (15%), Positives = 100/311 (32%), Gaps = 23/311 (7%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 + L+LN L L++ S + AA+R+++T AVS + +L L L P Sbjct: 30 MRRLNLNHLHTFSLVIAHGSFSAAAERLHLTQPAVSLHVRQLEDQLKLQLIERVGKRLKP 89 Query: 65 TPLMVSMEQNLAEWMQMSNLLLDKP-HHQTPRGLKFELAAESPLMMIMLNALSKQIYQRY 123 T + +++A + L H + K + + + +L + + + +R+ Sbjct: 90 TSAGTVLLEHIARIDAVVEDALQALSSHASGVAGKIAIGTGATACIHLLPPMLQALRRRF 149 Query: 124 PQATIKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCV 182 P+ +++ + + L A+ +D+ + RS + L D Sbjct: 150 PELDVRVSTGNTEGILKAVEENLLDLALVTLPAASRS----------LHITPLLEDAFVA 199 Query: 183 WLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 + + P + S +D G M L E Sbjct: 200 IFASSQRPMPAHMTPERLSAQPLVVFEAGSSTRLLIDEWFLHAGIRVKPVMELGSIEAIK 259 Query: 243 FMAAQPDNLLLATAPRYC-QYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 M A L + PR + L ++ L L + + + Sbjct: 260 EMVAAD--LGYSIVPRMAVAALHHRRGLQMLPL--------ATALSRTLGIALRQDKPVS 309 Query: 302 PKIVWLRETIK 312 + + + ++ Sbjct: 310 KALRQVLDALQ 320 >UniRef50_B9ZSB8 Transcriptional regulator, LysR family n=4 Tax=Bacteria RepID=B9ZSB8_9GAMM Length = 340 Score = 198 bits (505), Expect = 2e-49, Method: Composition-based stats. Identities = 44/312 (14%), Positives = 94/312 (30%), Gaps = 21/312 (6%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 I L L + +++ S T+AA+ +++T VS + KL PLF P Sbjct: 26 IRHATLRQLQVFEAIVRLGSFTRAAEELHLTQPTVSIQIKKLSTALGLPLFEYVGRKAFP 85 Query: 65 TPLMVSMEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQIYQRY 123 T + + + E + L K + LA ++ Q +RY Sbjct: 86 TEVGLLLYDTCREMLGALTNLEMKLAEMHGLKRGRLRLAVI-TTAQYFAPSILGQFARRY 144 Query: 124 PQATIKLRNWD-YDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCV 182 P + L + L+ ++ + D+ G + + + V Sbjct: 145 PDIELSLEVSNFDRVLERLSNNDDDLYIIG---------HVPERLTDVAVHPFAPNPLVV 195 Query: 183 WLRKDHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQS 241 +DHP + + L + + A + QE G + M L E Sbjct: 196 MASRDHPLVGRRNIPLKELEQETFLMREPGSGIREATLKLFQEHGISPPVRMELGSNEAI 255 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 + + + + P+ + + + + +++ K+ + Sbjct: 256 KQAVIGGLGIAVLSLHTLSAEGAEG--------PVALLDVEHFPIHRQWHIVYPKKKVLS 307 Query: 302 PKIVWLRETIKN 313 + Sbjct: 308 VVAQTFLDFAIQ 319 >UniRef50_A9C046 Transcriptional regulator, LysR family n=2 Tax=cellular organisms RepID=A9C046_DELAS Length = 317 Score = 198 bits (505), Expect = 2e-49, Method: Composition-based stats. Identities = 44/315 (13%), Positives = 96/315 (30%), Gaps = 25/315 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 + +LL L +ER +AA+R+ +T +S +L L L + TP Sbjct: 16 MKTHLLRYFVALAEERHFGRAAQRLCITQPPLSMALKTLEQDLGASLMDRDAKNVRLTPA 75 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQT-PRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + + D + ++ ++ + + P Sbjct: 76 GEAFLVEARKVLAQLQHAADVVRGVAEGMQGRLDVGITGSMVYRQVPDFCRAFRAERPLV 135 Query: 127 TIKLRNWD-YDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + L + L AI G++D GF ++S P + + + L Sbjct: 136 EVCLHEMSTREQLQAIASGQIDCGF----------LNIASPPDGLQTLSIGEEPFVCCLP 185 Query: 186 KDHPALHQT-WNLDTFLRYPHISICWE--QSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 H Q +L R + E ++ + LQ+ G + ++ + Sbjct: 186 ATHALAQQPDIDLRELARDTFVMFAREVAPANYDNVIACLQQAGIHPHTRHAARQWLTVM 245 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 + + +A P Q +V +PL + + W Sbjct: 246 ALVSAEQG--VALVPSCMQRVGMNG---VVFVPLRGPQQAMTPA----VMAWRADQPA-A 295 Query: 303 KIVWLRETIKNLYAS 317 + E ++ + ++ Sbjct: 296 LLQAFIERVRAMAST 310 >UniRef50_A1S338 Transcriptional regulator, LysR family n=16 Tax=Shewanella RepID=A1S338_SHEAM Length = 302 Score = 198 bits (505), Expect = 2e-49, Method: Composition-based stats. Identities = 52/313 (16%), Positives = 100/313 (31%), Gaps = 28/313 (8%) Query: 1 MKKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPL 60 M I L C L + S T+AA+++++T +SK L +L + L + + Sbjct: 1 MNIPIKN-----LHCFVTLAETGSFTRAAEKLHLTQPTLSKMLQRLEDHWQQQLIIRNNQ 55 Query: 61 GLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGLK-FELAAESPLMMIMLNALSKQI 119 LS T + ++ E + +LL + + L + +++ L Sbjct: 56 KLSLTQAGELLLEHAREMLGQWHLLEEDLSNLRGVQRGYLRLGVCPMMSSLVI-ELLTAF 114 Query: 120 YQRYPQATIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSD 178 RYP +++ + A+ +DI F+ + + + L + Sbjct: 115 RARYPGVRLEMFEYGGFGCEKALLANNLDIAFTALPATHAD---------ELTAQPLTAY 165 Query: 179 VPCVWLRKDHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPE 237 L H + F +P I + + LD++ + G E +A + Sbjct: 166 PLLACLPAGHKLANKAALDWCDFGSHPFIMYNQDFALAKLLDSLARNAGVELNVAYRSGQ 225 Query: 238 FEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKR 297 ++ M L + AP +L L PL L+W Sbjct: 226 WDFLASMVEANMGLAILPAP----ICEKLTDKALCFRPL------SGGHTWDLALIWRSH 275 Query: 298 NSHNPKIVWLRET 310 P Sbjct: 276 LHLTPAAAAFLAL 288 >UniRef50_B2I357 Transcriptional regulator n=14 Tax=Moraxellaceae RepID=B2I357_ACIBC Length = 286 Score = 198 bits (505), Expect = 2e-49, Method: Composition-based stats. Identities = 50/310 (16%), Positives = 110/310 (35%), Gaps = 28/310 (9%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L +M+ S++ AA ++ +T AV+K + L +F LF ++ G+ T Sbjct: 1 MNLAAFEAFVKVMETGSISVAADQLFITQPAVTKRIHSLEEYFGVKLFESAGRGVQATHA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKP-HHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 S+ + W+ + H QT + ++ + + L A K Q++PQ Sbjct: 61 AHSLLPKVKSWLNELRDIHHTLSHEQTQIQGRLKIGTSHHIGLHHLPAPLKHFVQQFPQV 120 Query: 127 TIKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 T+ + D + + + G++++ F S ++Y +++D Sbjct: 121 TLDVHFVDSEQAHEQVLAGDLELAFLTLP---------PSGDERLNYITIWNDPLVFVAA 171 Query: 186 KDHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 HP + L + YP + + ++ G + I MS E + Sbjct: 172 PFHPLAQKKNLTLQDLIEYPSLLPAAQTYTAQITLAEFEKQGLKPKITMSNNPLESIRML 231 Query: 245 AAQPDNLLLATAP-RYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 L + P Q L + ++ ++WH + + Sbjct: 232 V--SIGLGWSVLPKTLLNQDMQQLDLNV-------------EMNRQLGMVWHPARTQSRA 276 Query: 304 IVWLRETIKN 313 + L + ++ Sbjct: 277 MQELIKMMQE 286 >UniRef50_Q8KY13 LysR-type transcriptional activator n=1 Tax=Rhizobium sp. TAL1145 RepID=Q8KY13_9RHIZ Length = 320 Score = 198 bits (505), Expect = 2e-49, Method: Composition-based stats. Identities = 66/316 (20%), Positives = 129/316 (40%), Gaps = 21/316 (6%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 + +DLNLL LLMQERSVTKAA R T SA+S SL +LR F D LFV ++P Sbjct: 7 LNQIDLNLLRVFDLLMQERSVTKAADRAGRTQSAISHSLNRLREIFGDELFVKRAGSMNP 66 Query: 65 TPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQIYQR 122 T + + + + ++ + + P +F + + L L ++ + Sbjct: 67 TAQARELATVITQALSDIEGVVSQRINFKPSESHRQFRIGVTDYTSALYLPTLLEEFNSK 126 Query: 123 YPQATIKLRNWD-YDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPC 181 P A +++ Y++ + ++ ++D G S I VL Sbjct: 127 APNARLRIVPVYLYEAAELLSDPDLDCVLIGNPIIRES---------HIVETVLARHEML 177 Query: 182 VWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQS 241 + + ++ +L PH+ I + ++ D L +G R +A ++P + + Sbjct: 178 CAAWSGNAVIKD-LTMEKYLAMPHLQISPDGDESGVSDKALATIGLSRRVAATIPYYMVA 236 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 + + A A ++ ++ + PL +V +L++ + + Sbjct: 237 PKVLRGTQMIA-AFADGMLSLIDESSEILVTRPPLALP-------DVRVSLIYVRTKQTD 288 Query: 302 PKIVWLRETIKNLYAS 317 +WLR I+++ + Sbjct: 289 AGHIWLRSCIRSIVTA 304 >UniRef50_Q1IBR2 Putative transcriptional regulator, LysR family n=1 Tax=Pseudomonas entomophila L48 RepID=Q1IBR2_PSEE4 Length = 293 Score = 198 bits (505), Expect = 2e-49, Method: Composition-based stats. Identities = 44/309 (14%), Positives = 93/309 (30%), Gaps = 24/309 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++ LL + +E +AA+R+++ +S+++A+L LF G+ TP Sbjct: 2 IETRLLRQFVAVAEELHFHRAAERLHMAQPPLSQAIARLEQRLGFILFQRHSRGVRLTPA 61 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + +Q L + + + + + L K+ Q++P Sbjct: 62 GTQLLDTARATLQGLELGVQQARRIAQGQAGALRIGSLALAGHPPLLDGLKRFRQQWPDV 121 Query: 127 TIKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + L+ L + ++D+ + L + + + + L Sbjct: 122 ELSLQQASSAQLARMLLDEQLDLAVLRD---------VPELDERLQRHMWHEEPLLLALP 172 Query: 186 KDHPALHQ-TWNLDTFLRYPHISICW--EQSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 DHP + L F P + L + + G I + + Sbjct: 173 ADHPRADASSVALADFADEPFVFTPRSLGSRYHQHLLELCLDAGFSPRIVQEAAQLQTVA 232 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 + A +A P N + L + +P L W + Sbjct: 233 SLVAC--GFGVALLPESAALANVQPGVCFRPL-------RDVAAPLPLYLAWRAG-DGSL 282 Query: 303 KIVWLRETI 311 L E + Sbjct: 283 ARQRLLEWL 291 >UniRef50_Q1N6N4 Transcriptional regulator, LysR family protein n=1 Tax=Bermanella marisrubri RepID=Q1N6N4_9GAMM Length = 300 Score = 198 bits (505), Expect = 2e-49, Method: Composition-based stats. Identities = 46/277 (16%), Positives = 92/277 (33%), Gaps = 24/277 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +D L + + S ++AA R+++T AVSK +A L D LF P + TP Sbjct: 1 MDTQSLQAFIAVAETESFSQAAHRLHLTQPAVSKRIAMLEDTLDCQLFDRLPRKATLTPA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTP-RGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 ++ + + + + + + + L + ++ + YPQ Sbjct: 61 GEALMPKAKHIVSELLEIKTELASLSGDVSGTLRIGTSHHIGLHHLPHILRKFHSTYPQV 120 Query: 127 TIKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + ++ ++ +A+ GE+DI F+ +D + ++ D Sbjct: 121 KLAMQFLGSEAACEALANGELDIAFATLPLEQ---------DPKLDMQAIWRDPLTFVCS 171 Query: 186 KDHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERT----------IAMS 234 HP Q +L ++ I ++ ++ I+M Sbjct: 172 HTHPLSKQKNIHLKDLTQHEAILPEPNTVTFEIIEAAFKKEKLSLQAALPSRYRETISMM 231 Query: 235 LPEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPL 271 E M L A P + L +L L Sbjct: 232 SSYMETIKMM--ASVGLGWAVLPDHMAQDKDLIRLNL 266 >UniRef50_A6V5Q0 MexT protein n=1 Tax=Pseudomonas aeruginosa PA7 RepID=A6V5Q0_PSEA7 Length = 308 Score = 198 bits (505), Expect = 2e-49, Method: Composition-based stats. Identities = 65/321 (20%), Positives = 119/321 (37%), Gaps = 23/321 (7%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 ++I +DLNLLL LM ERS T+AA ++VT AVS +L +LR F D LF+ S G+ Sbjct: 7 RNIARIDLNLLLTFHCLMSERSATRAAVVLHVTQGAVSAALRRLREHFGDELFIRSASGM 66 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTP--RGLKFELAAESPLMMIMLNALSKQIY 120 PT + + +AE + + +L +P F +A + + + Sbjct: 67 QPTRKAMELAPRIAEALTSISGVLAAEPEFSPHDSSYVFNIALSDDIESYLAPCIVNAAA 126 Query: 121 QRYPQATIKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 + + ++ ++D+ + +VLFS Sbjct: 127 AEGLGVSFAFHQSNSSLWKQSLLDPDMDLVICSEPKDFNTS---------YSSQVLFSSS 177 Query: 180 PCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFE 239 R LD + H+ I ++ +D++ + G R + S F Sbjct: 178 YSCLFRPRGSMAGAAIGLDDYFAANHVRISYDGR-RGFIDDLFESAGYARRVTASFTHFA 236 Query: 240 QSLFMAAQPDNLLLATAPRYCQY-YNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRN 298 +L + ++AT P + Y+++ L +PLP ++W Sbjct: 237 GALSTLMSGE--VIATLPTFAAETYSRMMDLHCCPVPLPVP-------SFRCFMVWDVAK 287 Query: 299 SHNPKIVWLRETIKNLYASMA 319 + WLR + + + Sbjct: 288 HNKTHHDWLRRFVGEIAQRLG 308 >UniRef50_Q38ZY8 Transcriptional regulator, LysR family n=1 Tax=Burkholderia sp. 383 RepID=Q38ZY8_BURS3 Length = 310 Score = 198 bits (505), Expect = 2e-49, Method: Composition-based stats. Identities = 74/317 (23%), Positives = 125/317 (39%), Gaps = 21/317 (6%) Query: 2 KKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLG 61 + + D+NLL+ LMQERSVT+AA ++ + A+S SL+ LR D LF+ Sbjct: 6 HFDLRSFDMNLLIAFDALMQERSVTRAAAKLRIQQPAMSHSLSTLRLLLRDELFIRVGRT 65 Query: 62 LSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTP--RGLKFELAAESPLMMIMLNALSKQI 119 L PTP +S++ + + L P F +A + + ++L + + Sbjct: 66 LQPTPRALSLQHTVRSSLLQLQEALKTEESFDPSNARRDFRVAMTNGIESLLLPDMVARF 125 Query: 120 YQRYPQATIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSD 178 T+ R+ D D D + RGE+++ S I LF++ Sbjct: 126 RTDAQGMTLLARSVDPQDMPDMLDRGELNLAIG----------CYESTHPWIRRHELFNE 175 Query: 179 VPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEF 238 D + + T++ PH+ + + L++ L++ E I + P F Sbjct: 176 TLTCCFNPDLLPIKTPIDEQTYVETPHVVVSMRNTILGCLEDALRDARVELNIVSAGPNF 235 Query: 239 EQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRN 298 L MAA +L R Y L +P+ F + P ++WH R Sbjct: 236 LAVLMMAADTP-VLTTLPSRIALRYADRFGLSTCPVPISFSAN-------PIAMVWHARE 287 Query: 299 SHNPKIVWLRETIKNLY 315 P WLR ++ L Sbjct: 288 DREPGSEWLRRLVRELC 304 >UniRef50_B5GKV4 LysR-family transcriptional regulator (Fragment) n=20 Tax=Streptomyces RepID=B5GKV4_9ACTO Length = 328 Score = 198 bits (505), Expect = 2e-49, Method: Composition-based stats. Identities = 45/303 (14%), Positives = 87/303 (28%), Gaps = 25/303 (8%) Query: 13 LLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSME 72 L + + VT+AA + + S +S+SLA+L LF L+ TP + Sbjct: 36 LAHFAGVARSEHVTRAAHEMRMPQSTLSRSLARLEEDLGVALFARRGRTLALTPAGRTFL 95 Query: 73 QNLAEWMQMSNLLLDKPH-HQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQATIKLR 131 + + ++ P K L + L + +P L Sbjct: 96 TGVERALGEVERAAEEVRADADPAAGKVAFGFLHTLGPETVPGLLRAFRADHPGVRFSLV 155 Query: 132 NW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPA 190 L+ + GE+D+ + + + + + +DHP Sbjct: 156 QNYGEAMLERLRAGELDLCLTSPVPQEP----------GLVARRVDEQRLHLVVPEDHPL 205 Query: 191 -LHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQPD 249 + L +++ D++ G IA E E + A Sbjct: 206 AARRRVRLAEAAGETFVTLEPGYGLRRITDDLCARAGFRPRIAFEGEEAETLRGLVAA-- 263 Query: 250 NLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWLRE 309 L +A P + QL + A + L W + + + Sbjct: 264 GLGVALLPPPAVPRPGVVQLGITAP----------RAVREIGLAWREGAPDTAPVAAFKR 313 Query: 310 TIK 312 + Sbjct: 314 FLL 316 >UniRef50_C6D056 Transcriptional regulator, LysR family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D056_PAESJ Length = 296 Score = 198 bits (505), Expect = 2e-49, Method: Composition-based stats. Identities = 44/318 (13%), Positives = 92/318 (28%), Gaps = 34/318 (10%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L Q + + +T+AA+ ++++ A+SK++A L A LF + + Sbjct: 1 MELLQLKYFQTTARLQHMTQAARHLHISQPALSKTIASLEAELGVKLFERTNKSIRLNEH 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRGLK-----FELAAESPLMMIMLNALSKQIYQR 122 + + +Q + + + +L L + + Sbjct: 61 GIHFLSKVDIALQALEDGKRELQDLVESPSEYITLDVRV------SSHLLPGLLAEYRKS 114 Query: 123 YPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCV 182 P L +L + + D+ S P L + V Sbjct: 115 KPDTQFHLLQ---HALPSEHAFDFDLCLSDGAVP----------PPGCHSVALLREKIVV 161 Query: 183 WLRKDHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQS 241 L +H +L+ IS+ +S D + G I + Sbjct: 162 ALPSEHRLAKRDRISLEELKEERFISLPPGKSLRETTDAFCRLAGFTPHIQFESDDPATV 221 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 + L + +V +PL ++ E +L W K Sbjct: 222 RGLIRAGQGLAFLP----AITWGGSTGSDVVTIPL-----KEGYCERSISLHWPKGRYLT 272 Query: 302 PKIVWLRETIKNLYASMA 319 R+ ++ +A Sbjct: 273 QAAASFRDCTTRYFSELA 290 >UniRef50_A4XPG0 Transcriptional regulator, LysR family n=1 Tax=Pseudomonas mendocina ymp RepID=A4XPG0_PSEMY Length = 294 Score = 198 bits (504), Expect = 2e-49, Method: Composition-based stats. Identities = 45/307 (14%), Positives = 95/307 (30%), Gaps = 22/307 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L+ L + + S++ A+R++++ AV++ + +L A D LF P G+ T Sbjct: 1 MNLHHLKVFLAVAEAGSISAGAERLHISQPAVTREIRELEANLDLRLFDRLPRGVQLTEG 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + + L A + L +L L + +PQ Sbjct: 61 GQRLLDYARRIFALEQAAERDLRDFAQLEQGELHLGASATLGAYLLPPLISRFRALHPQI 120 Query: 127 TIKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + L + +++ + G + +GF D+ +L D + Sbjct: 121 FVSLEVSNTEAVTRQLDDGRISLGFVEGPFAQA----------DYDHRLLARDALLPVVA 170 Query: 186 KDHPALH--QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 HP YP ++++ + G E M++ E Sbjct: 171 PRHPLARTAAPLQASELQAYPLYMREPGSGARASVEHAYRVHGLEPRAGMAIGSTEALKR 230 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 + A + + + L Q ++E +LW S +P Sbjct: 231 LLADGQGIAWLSQRVVERELASGELQRL--------TVQDLQIERELHVLWRPGASLSPA 282 Query: 304 IVWLRET 310 Sbjct: 283 PAAFLAL 289 >UniRef50_C4V039 Transcriptional regulator, LysR family n=4 Tax=Enterobacteriaceae RepID=C4V039_YERRO Length = 337 Score = 198 bits (504), Expect = 2e-49, Method: Composition-based stats. Identities = 65/295 (22%), Positives = 122/295 (41%), Gaps = 21/295 (7%) Query: 21 QERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSMEQNLAEWMQ 80 +E SVT+AA+R+++ AVS +LA+LR F+DPLFV S G++PTP ++ +L M+ Sbjct: 29 REGSVTRAAERLHLGQPAVSGALARLRIMFNDPLFVRSAKGMAPTPRAETLIASLLPMME 88 Query: 81 MSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQIYQRYPQATIKLRNWDYDSL 138 +L +P P F L + ++ L + + P +++ D Sbjct: 89 QMKQVLFQPPTFNPATDAHTFRLGMSDWVERWLMPGLLATLAREAPGIQLQMMASDPFLD 148 Query: 139 DAITR-GEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPALHQTWNL 197 + + + +VD+ S + +P + E + C AL +L Sbjct: 149 EELVQLDKVDVAISVGQ----------GIPAGMIREPVVRMGFCTLWHPLQLALTSPLSL 198 Query: 198 DTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQPDNLLLATAP 257 + ++ + H+ + + + +D L R + P F M Q L Sbjct: 199 EEYIAHDHLLVSYRGASHSQIDEQLARKNLTRRVRYVTPHFSSLPLMLKQIPAL-TTVPA 257 Query: 258 RYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWLRETIK 312 + + + L A+P+ +L+W R SH+P ++WL E ++ Sbjct: 258 GLASGWVEHYGLSRSAVPVSAPA-------FTLSLMWSTRRSHDPALLWLLEKLR 305 >UniRef50_Q30Z73 Transcriptional regulator, LysR family n=3 Tax=Desulfovibrio RepID=Q30Z73_DESDG Length = 319 Score = 198 bits (504), Expect = 2e-49, Method: Composition-based stats. Identities = 34/317 (10%), Positives = 89/317 (28%), Gaps = 23/317 (7%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 I +D L + + RS ++A + ++ +S ++ L D L G+ P Sbjct: 21 IDMIDFRRLEAFCKVYELRSFSRAGDELFLSQPTISAHVSALEKELDVRLLDRMGRGVLP 80 Query: 65 TPLMVSMEQNLAEWMQMSNLLLDKPHHQ-TPRGLKFELAAESPLMMIMLNALSKQIYQRY 123 TP + ++ + + + A + +L + + + Sbjct: 81 TPAGEILYRHAMTAFASLETAHLEISQLQDIITGEVPVGASTIPAQYLLPPVMAAYMRSF 140 Query: 124 PQATIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCV 182 P+ ++LR + + + GE+ +G G I + + D + Sbjct: 141 PEVQLQLRTGDTGEIIRKVGAGELTLGVVGAHDQQP----------DIVFTPIIDDELII 190 Query: 183 WLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGR---ERTIAMSLPEFE 239 D + + ++ P + L G + + Sbjct: 191 IGAPDFAPRSGSVSCESLADMPWVVREAGSGTWKIFSAALGTHGIDCRSFRPVACVDSSQ 250 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 + + + + ++ ++ + + + F ++H R Sbjct: 251 SVIQCVRAGLGVSVTSRIAVAEFLSRGELVEI--------TVDGLDVRREFFCIYHSRRQ 302 Query: 300 HNPKIVWLRETIKNLYA 316 P E + Sbjct: 303 LFPAARHFIEFLTKKCR 319 >UniRef50_Q65FY0 Probable transcriptional regulator YwqM n=1 Tax=Bacillus licheniformis ATCC 14580 RepID=Q65FY0_BACLD Length = 297 Score = 198 bits (504), Expect = 3e-49, Method: Composition-based stats. Identities = 44/314 (14%), Positives = 97/314 (30%), Gaps = 25/314 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +++ L + ++ T+AA + S V+ + + PLF + T Sbjct: 1 MEIRHLKTFKTIVDIGGFTRAADYLGYAQSTVTSHVQAIEQELRKPLFYRLGKKMMLTEA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQAT 127 + AE +++ P + + A L + L A+ + +YPQ T Sbjct: 61 GKHLLPYAAEMVELYEKARHIPENDQEPSGNLIIGASESLTVYRLPAILHEFTSKYPQVT 120 Query: 128 IKLRNWD-YDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRK 186 + L++ + D + +G++D+ F + E L ++ K Sbjct: 121 VTLKSSTCWQLRDELKQGKIDVAFLLDNDRKE---------NDLHVEKLVNEPMVFIFPK 171 Query: 187 DHPALHQTWNLDTF---LRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 +HPA + LD + S + L++ G M E Sbjct: 172 EHPAGQKA--LDDLTFNANETFLYTEHGCSYRDFFEEYLRQRGVIADHTMEFWSVEAIKQ 229 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 L ++ P + + + +++HK +P Sbjct: 230 CVMC--GLGVSLLPLITTRTDIEEG--------KLQGTLVRDALFSTQMVYHKNKWLSPA 279 Query: 304 IVWLRETIKNLYAS 317 + + ++ Sbjct: 280 MAAFTDIVRRKARE 293 >UniRef50_Q13QG4 Transcriptional regulator, LysR family n=4 Tax=Burkholderia RepID=Q13QG4_BURXL Length = 302 Score = 198 bits (504), Expect = 3e-49, Method: Composition-based stats. Identities = 44/313 (14%), Positives = 98/313 (31%), Gaps = 26/313 (8%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 + ++L L C +L +E + ++AA+R+++ A+S+ + L L + LS Sbjct: 1 MNHMNLRALQCFVILAEELNFSRAAERLHIAQPALSQQIRSLEERLGTQLVDRARRPLSL 60 Query: 65 TPLMVSMEQNLAEWMQMSNLLLDKPHHQT-PRGLKFELAAESPLMMIMLNALSKQIYQRY 123 T + + + + R + M +L K ++ + Sbjct: 61 TEAGHYLCSEARQILGTLEQMTVVAQEIGIGRRGWLSIGFTRSSMYSVLPPALKAFHEAF 120 Query: 124 PQATIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCV 182 PQ +KL + DA+ + IG + L S+ Sbjct: 121 PQVELKLFEMLTEEQTDALRDMRIHIGIGRQPLAVE----------GCTSYPLLSEPVMA 170 Query: 183 WLRKDHPALH-QTWNLDTFLRYPHISICWEQSDT--WALDNVLQELGRERTIAMSLPEFE 239 L HP + + P I Q+ ++ ++ ++ G +A E + Sbjct: 171 ALEPGHPLAAHKKVRIADLADTPLILYPKHQNAQFKRSVLSLYRDAGITPAVAHEAYEIQ 230 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTL-LWHKRN 298 ++ + A L + + + + F TL + + Sbjct: 231 TAIALVAA--GLGVTFIGESVARHGRTD--------VAFRHLTGPGSSYRSTLAATFRTD 280 Query: 299 SHNPKIVWLRETI 311 +P + + Sbjct: 281 DPSPHLRAFLACL 293 >UniRef50_B9XK88 Transcriptional regulator, LysR family n=2 Tax=Verrucomicrobiales RepID=B9XK88_9BACT Length = 300 Score = 198 bits (504), Expect = 3e-49, Method: Composition-based stats. Identities = 50/315 (15%), Positives = 107/315 (33%), Gaps = 34/315 (10%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L Q + +E S ++AA+R+++ A+S+++ +L A +F S + TP Sbjct: 1 MELRHLRYFQAVAEELSFSRAARRLHIAQPALSRAIKQLEAILGANVFERSRHHVRLTPA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHH-QTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + ++ L + + L P L L ++ +R+P Sbjct: 61 GSVLLRETTMLLEHFEESLRRVRRTAAGEEGELRLGYIGPPTQPFLGRLLREYRKRFPLV 120 Query: 127 TIKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 TI L + + + +G + + +L++ L + VL + + + Sbjct: 121 TIHLEERTPQRVWEMVAKGRLSAAITRP--------VLTNEALGLRTVVLKQERLGIVVP 172 Query: 186 KDHPALHQT-WNLDTFLRYPHISICWEQ--SDTWALDNVLQELGRERTIAMSLPEFEQSL 242 HP + R P I + + A+ + G +A + + Sbjct: 173 VAHPFAKRRYVPWTALAREPLIVLARREGMGLHDAVIAGCRRAGVTPRLAHTPSLIGTVM 232 Query: 243 FMAAQPDNLLLAT----APRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRN 298 + + T AP + L + V L L+W + Sbjct: 233 SYVEACAGIGVVTESVAAPSPAVRFILLKPVQCVPL----------------VLVWQED- 275 Query: 299 SHNPKIVWLRETIKN 313 +P + RE + Sbjct: 276 EDSPPVQRFRELLFE 290 >UniRef50_C0Z633 Transcriptional regulator n=3 Tax=Bacillales RepID=C0Z633_BREBN Length = 293 Score = 198 bits (504), Expect = 3e-49, Method: Composition-based stats. Identities = 44/312 (14%), Positives = 97/312 (31%), Gaps = 27/312 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L + + + + +TKAA+ + + A+SK++A+L PLF + Sbjct: 1 MELLQLHYFRTVAKWQHMTKAAQELRIAQPALSKTIARLEEDVGVPLFDRERGRIRLNTF 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + + + + + + LA + +L+ + +P Sbjct: 61 GKAYLERVDKALNLLEEGQKVVSDLAGMEHGRIHLATS---TLDLLSEPLGKFLALHPDV 117 Query: 127 TIKLRNWDYDSLD-AITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 ++ + + + GEVDI F+ I + + V + Sbjct: 118 HFQITQATMEEMALLLESGEVDICFTHLPIKLP----------DILTTPVLKEDIHVAVP 167 Query: 186 KDHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 + H QT L I + D Q+ G A + + + Sbjct: 168 RTHHLAKQTSIQLSELAEESFIGYREDFPIQMLYDQFFQKAGITPKFACRVDDPGSIQKL 227 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 + ++ LV LP+ Q F ++ H++ + Sbjct: 228 VRAGLGIA------LYGCISREEDPHLVMLPIKHPICQ-----RHFQMIRHEKRYLSLAA 276 Query: 305 VWLRETIKNLYA 316 + I +A Sbjct: 277 RQFCDFIVQYFA 288 >UniRef50_A8LT79 Transcriptional regulator n=1 Tax=Dinoroseobacter shibae DFL 12 RepID=A8LT79_DINSH Length = 304 Score = 198 bits (504), Expect = 3e-49, Method: Composition-based stats. Identities = 46/309 (14%), Positives = 97/309 (31%), Gaps = 22/309 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L + L + +E S+T A++R+NV A+S+ L KL A PLF +P G+ PT Sbjct: 1 MELRQMQYLLAIYEEGSLTGASRRLNVVQPALSQQLQKLEAEIGQPLFTRAPKGMIPTQA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPH-HQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + ++ + + L+ P + S L ++ +YP Sbjct: 61 GIEAYEHFVRITRDLDTALNALSGDGGPVRGTVSIGVVSSAANNALGETLQKFTVKYPDV 120 Query: 127 TIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 ++K+ + D + +D+ + ++ + + C+ Sbjct: 121 SVKVTGGYTGELQDQLRMSRIDLAIINMPPLKQDPRIVD----------IVKEDFCLIAA 170 Query: 186 KDHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 D P + L+ + +D G + +M E + Sbjct: 171 PDTPITGKAGLRLEDIETMKLVIPSQRHGLRTIIDRAANGEGLALSPSMEFDEMKLIEDF 230 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 D + P L A P+ + + + + Sbjct: 231 VCATDY--VTILPPIAVNRALRSG-RLKAYPI------RPAISRRLVYQINPSRPLSAAA 281 Query: 305 VWLRETIKN 313 L + I+ Sbjct: 282 QILIDEIRE 290 >UniRef50_A0NZC9 LysR family regulatory protein n=3 Tax=Rhodobacteraceae RepID=A0NZC9_9RHOB Length = 305 Score = 198 bits (504), Expect = 3e-49, Method: Composition-based stats. Identities = 72/319 (22%), Positives = 137/319 (42%), Gaps = 24/319 (7%) Query: 4 SITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLS 63 ++ + DLNLL+ + +MQ S++ AA I ++PSAVS +LA+LR +D LF + G+S Sbjct: 3 NLRSFDLNLLVIFRAIMQRGSISGAANEIGLSPSAVSHALARLRVMLNDELFFRTAEGVS 62 Query: 64 PTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQIYQ 121 PT + ++ + + + H P F + + +L L+K++ Sbjct: 63 PTERARELSVDIERGLSFISTAISLQHQFVPAETNRVFTMQVADYVAGFLLPRLAKRLQS 122 Query: 122 RYPQATIKLRNW--DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 P TI + + +S+ VD+ P + + L +D Sbjct: 123 EAPGITIDILPFSISPESVWD----RVDM--------QVRLTPGRLQPEMVRSQRLLADE 170 Query: 180 PCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFE 239 V +R+ HP + + + + PH+ + + T +++ L G +R +AM++ + Sbjct: 171 IVVLMRRGHPRVDEPMTAELYAELPHVKLSQSATGTTVIEDALAARGLKRHMAMTVASWF 230 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 + + A+ D + +A R +L +L LPL ++ F L W R Sbjct: 231 EIPDIVARSDLIAIA-PQRLLSLDPRLGKLHSAPLPL-------DEVVFSFDLCWDLRKE 282 Query: 300 HNPKIVWLRETIKNLYASM 318 P WLR+ I ++ + Sbjct: 283 REPGQKWLRQLIVEMFEEV 301 >UniRef50_C0ZGB6 Transcriptional regulator n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZGB6_BREBN Length = 298 Score = 198 bits (504), Expect = 3e-49, Method: Composition-based stats. Identities = 46/301 (15%), Positives = 93/301 (30%), Gaps = 19/301 (6%) Query: 13 LLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSME 72 + + + + +S T+AA+ + S+V+ + L + F LF + T + Sbjct: 1 MQTFREVAKCQSFTRAAEVLGYAQSSVTTQIQNLESEFGVSLFERWGKKIRLTHAGEVLL 60 Query: 73 QNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQATIKLRN 132 + + + Q + L L ++ P+ I L Sbjct: 61 GYSEQLQAVLDEAKANLSEQAQLAGTLRIGTVESLAAFYLPPYLQKFRLEQPRMRIMLAP 120 Query: 133 W-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPAL 191 D + G+ D F +S ++ VL + V HP + Sbjct: 121 GICQDLRQGVKEGKFDFAFVLDWLQDQS---------ELENVVLGEEKLVVVAAPTHPLV 171 Query: 192 HQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQPDN 250 + F I S +++VL+E G + E A + Sbjct: 172 KKEKVETHDFTGETWIFTEKGCSYRGMMESVLREAGATVESSFEFGSLEAIKQCVA--YD 229 Query: 251 LLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWLRET 310 L +A P+ + LV L + + + L++HK+ ++ E Sbjct: 230 LGIALLPKIVVQEEVKNG-TLVILSFSHPDIRVFRQ-----LVYHKKKWMPQALLRFLEL 283 Query: 311 I 311 + Sbjct: 284 L 284 >UniRef50_Q477L7 Regulatory protein, LysR:LysR, substrate-binding n=6 Tax=Burkholderiales RepID=Q477L7_RALEJ Length = 315 Score = 198 bits (504), Expect = 3e-49, Method: Composition-based stats. Identities = 68/324 (20%), Positives = 118/324 (36%), Gaps = 24/324 (7%) Query: 1 MKKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPL 60 M ++ D LL L +L+ E+SV++ A R+N + A+S +L +LRA F+DPL Sbjct: 1 MIRADDPFDTYLLRVLCILIAEQSVSRTAIRLNQSQPAISSALKRLRAIFNDPLLTREKN 60 Query: 61 GLSPTPLMVSMEQNLAEWMQMSNLLL--DKPHHQTPRGLKFELAAESPLMMIMLNALSKQ 118 + PT + + +N + + LL D F +A L + ++ Sbjct: 61 VMVPTERALQLARNAQAALSALDNLLVSDDRFDPATTEQSFTVAMPDYLAPPFFAHVVRE 120 Query: 119 IYQRYPQATIKLRNWDY--DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLF 176 + P A + D A++ G DI + P + VL Sbjct: 121 FRRAAPHARLSAVPLSATFDYEQALSEGAADIVIGNWPNP----------PEHLHLSVLL 170 Query: 177 SDVPCVWLRKDHPALH-QTWNLDTFLRYPHISICW-EQSDTWALDNVLQELGRERTIAMS 234 D + D + +L HI + +D+ L + R +S Sbjct: 171 EDEVVCVVAPDSVHNQPGKFTPQAYLGAAHIVPTPYSRDQRGLVDSGLSTMRVHRDNRVS 230 Query: 235 LPEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLW 294 P F + + D L+L T + Y+ Q L ++ P+ F + F LW Sbjct: 231 CPYFNLAPSLIPGTD-LILTTGRHFANYHAQHVPLAVLRPPIEFPFMR-------FYQLW 282 Query: 295 HKRNSHNPKIVWLRETIKNLYASM 318 H + +WLR + + Sbjct: 283 HPSRHRSAAHMWLRGMLTAASQEL 306 >UniRef50_Q81BG8 Transcriptional regulators, LysR family n=8 Tax=Bacillaceae RepID=Q81BG8_BACCR Length = 290 Score = 197 bits (503), Expect = 3e-49, Method: Composition-based stats. Identities = 52/305 (17%), Positives = 99/305 (32%), Gaps = 27/305 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 + L L ++ ++++AA+ +NVT S VS ++ L + L + G+ T Sbjct: 1 MSLTKLEIFLKTVEMGNLSRAAEAMNVTQSGVSHAIRSLELEYGFQLLSRNKTGVRLTEN 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTP-RGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + ++ E + + L + + + + L A+ + + YP+ Sbjct: 61 GERVLTHVREVVNHNERLKQTVAEINGIVAGTLRIGTFTSVSIHWLPAIIHRFHLEYPRI 120 Query: 127 TIKLRNWDYDSLD-AITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 IKL DY ++ I +G +D+GF S ++ L D L Sbjct: 121 EIKLMEGDYGMIETWIQQGVIDLGFMSLPSAG-----------HLESIPLRKDRMLCVLP 169 Query: 186 KDHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 K+H Q+ D + P I + VL+ I + + M Sbjct: 170 KNHSLSKQSIIQYDQLEKEPFIMPASSCGYD--VRKVLEAARIHLDIQFETGDDHAIVAM 227 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 + L ++ Q + +V L + K L P Sbjct: 228 VE--NGLGISVMSELALQ-GQCENVTVVEL--------EDKPTRSLGLSLTSIKHALPAT 276 Query: 305 VWLRE 309 E Sbjct: 277 KRFIE 281 >UniRef50_C7NJ53 Transcriptional regulator n=1 Tax=Kytococcus sedentarius DSM 20547 RepID=C7NJ53_KYTSD Length = 327 Score = 197 bits (503), Expect = 3e-49, Method: Composition-based stats. Identities = 48/310 (15%), Positives = 105/310 (33%), Gaps = 16/310 (5%) Query: 13 LLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSME 72 L ++ + ++ S T AA + T A+S+ + +L PL + T + Sbjct: 7 LRIMRAISEQGSFTAAAHSLGYTQPAISQMVRRLEGRIGTPLVERQGRTVRLTQAGQVLA 66 Query: 73 QNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNALSKQIYQRYPQATIKLR 131 ++ + + + + + +AA ++ + + +P I+L Sbjct: 67 RHAVTVLSLLDTAEQELSALAGLQSGRVRVAAFPSSSAALVPHALRDLRAEHPAIEIQLT 126 Query: 132 NW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPA 190 +SL A+ G D+ + S + L ++ + +D + L +DHP Sbjct: 127 EAEPPESLAALRDGRCDLAVAFSHSGTPVGREVDDL-AGLEIRDILTDEMLIALPEDHPQ 185 Query: 191 L-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQPD 249 T L P I+ C L ++ QE G + ++ L + + Sbjct: 186 AGGDTVALAALADDPWIAGCARC--RGHLMHLGQEAGFIPRVEFQTEDYVAVLGLVSA-- 241 Query: 250 NLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWLRE 309 L A PR + + + + L ++ E + P + + + Sbjct: 242 GLGAALVPRMVLRHVRHEGVVALPL--------SQRSERTIHAVTTADLLRVPAVAAMMD 293 Query: 310 TIKNLYASMA 319 ++ MA Sbjct: 294 SLCRAAGEMA 303 >UniRef50_UPI000050F7F0 LysR family transcriptional regulator n=1 Tax=Brevibacterium linens BL2 RepID=UPI000050F7F0 Length = 298 Score = 197 bits (503), Expect = 3e-49, Method: Composition-based stats. Identities = 42/314 (13%), Positives = 102/314 (32%), Gaps = 28/314 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L + QE +AA+ +++ A+S+ + L D LF + + T Sbjct: 1 MELRHFSAFLAVAQELHFGRAAETLHIAQPALSQMIRSLEKDLDVQLFERTTRRVRLTSS 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQ-TPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 ++ + + + +L+ L++++ R P Sbjct: 61 GEALIEPARSIQAQVEGARRIARAAKEGVVGRVRIGFGGTSGYSILSLLAREVAHRQPGI 120 Query: 127 TIKLRN--WDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 ++++ + +S A+ G +D+G P I V+ + V + Sbjct: 121 SLEMHPQTYSGESALAVRDGTMDMGIISPP-----------APAGIAVHVIRQERVMVAV 169 Query: 185 RKDHPAL-HQTWNLDTFLRYPHI--SICWEQSDTWALDNVLQELGRERTIAMSLPEFEQS 241 H Q+ ++ P I + A+ + + G IA P+ Sbjct: 170 PTSHELADAQSVSMADLKEQPFITYAPSHGSQVREAMMRLADQAGYLPHIAQEAPDPYSL 229 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 L + + + + ++ + V L + L W +RN+ + Sbjct: 230 LALVGAQVGIAIVVESS---NHIRIDGVTYVRL-------AEGGNAFTLALGW-RRNNPS 278 Query: 302 PKIVWLRETIKNLY 315 + + E ++ + Sbjct: 279 KALARVVEIVQEIL 292 >UniRef50_Q7WNE4 LysR-family transcriptional regulator n=1 Tax=Bordetella bronchiseptica RepID=Q7WNE4_BORBR Length = 293 Score = 197 bits (503), Expect = 3e-49, Method: Composition-based stats. Identities = 40/308 (12%), Positives = 98/308 (31%), Gaps = 26/308 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +DL L L +E +AA R++++ +S ++ L LF + ++ T Sbjct: 1 MDLRQLKYFVALAEELHFRRAAARLSISQPPLSHAIKLLEEELGTALFERTTKSVALTSA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQ-TPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + + + + + +++ L + + QR P+ Sbjct: 61 GQAFYPEALKVLAQLQVACAVTREVGAGKRGHLRIGFVGGMLLRGLPEIVRDYAQRNPEV 120 Query: 127 TIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + L + AI RG++ GF L ++ +V+ + + Sbjct: 121 IVTLHETSSAEQAKAIARGQLSAGF----------LHAGLLAPELEGQVIRDEPFVACVP 170 Query: 186 KDHPALHQT-WNLDTFLRYPHISICWE--QSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 +DH + ++ + + ++ + + G I + + +L Sbjct: 171 RDHRLAGRRVIDVRQLAGEDMVLFARDVSPGYYDSVIALCMDAGFSPRIRHEVAHWLTAL 230 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 + ++ + L P + + L L A W KR++ +P Sbjct: 231 LLISRGGGVALVPDPFVDAGLDGVRYLRLKACDSRSYA----------HFAW-KRDASDP 279 Query: 303 KIVWLRET 310 + Sbjct: 280 LLREFVAF 287 >UniRef50_B4ETA7 LysR-family transciptional regulator n=37 Tax=Enterobacteriaceae RepID=B4ETA7_PROMH Length = 296 Score = 197 bits (503), Expect = 3e-49, Method: Composition-based stats. Identities = 43/303 (14%), Positives = 96/303 (31%), Gaps = 23/303 (7%) Query: 7 TLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTP 66 + L L +++ S T+A++++ ++ SAVS SL L LF L Sbjct: 2 RITLRQLEVFTEVLKSGSTTQASQQLALSQSAVSASLTDLENQLGVQLFDRVGKRLVTNE 61 Query: 67 LMVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + + + +AA + + +L + ++ YP Sbjct: 62 HGRLLYPRA---LSLLERATEVEQLFQAGNGALRIAASTTIGNYILPQMLGNFHRNYPDI 118 Query: 127 TIKL-RNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 +++ + + +++ VD+G + + + D ++ Sbjct: 119 PLEMSIGNTEEVVKSVSEFRVDLGLIEG----------ACQSSELISQKWLLDEMVIFCS 168 Query: 186 KDHPALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 +HP +T L P I L+++L I M L E Sbjct: 169 PEHPLAKAKTVTLADLQSAPWILRENGSGTRDVLNHLLFASLPGYRIEMELGNSEAIKHA 228 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 + ++ R L + + KL+ L++H++ + + Sbjct: 229 VM--YEMGISCLSRRVIQDQIESGS------LKEIKVEGLKLQRTLYLVYHRQKHVSDAL 280 Query: 305 VWL 307 L Sbjct: 281 KKL 283 >UniRef50_Q1YVH2 Transcriptional regulator, LysR family protein n=1 Tax=gamma proteobacterium HTCC2207 RepID=Q1YVH2_9GAMM Length = 324 Score = 197 bits (503), Expect = 3e-49, Method: Composition-based stats. Identities = 76/327 (23%), Positives = 137/327 (41%), Gaps = 24/327 (7%) Query: 1 MKKS-ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSP 59 M ++ LDLNLL+ LQ L++E+SVT+AA+R+ +T A+S+ L +LR DDPLF + Sbjct: 1 MNLQKLSRLDLNLLVALQALLEEKSVTRAAQRLFITQPAMSRVLQRLRQQLDDPLFTRTG 60 Query: 60 LGLSPTPLMVSMEQNLAEWMQM-SNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQ 118 L PTP ++ L + +++ D + +A + + + + L+ Sbjct: 61 NILIPTPKAQELQLRLPMLLDGILDMVTDGEFDPATYVGEITIAIPEFIAISLASQLTAL 120 Query: 119 IYQRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSD 178 + + P + + + ++ G +D ++ + + L Sbjct: 121 LNKYAPGVILSISSETDSVAGELSDGVLDFAI----------DIKREITAEVTARHLSIF 170 Query: 179 VPCVWLRKDHPALHQ-TWNLDTFLRYPHISI------CWEQSDTWALDNVLQELGRERTI 231 P +W+R+ HP + LD L+YP++ D L++ GR R+ Sbjct: 171 SPSIWMREGHPLAKKNRVTLDEILQYPYVQYYLLIAKRVSARTDARFDRALRKQGRSRSK 230 Query: 232 AMSLPEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFT 291 AM + ++ D L+++ A +L+++ P + VP Sbjct: 231 AMVTNQLMTAIETICASDCLMVS-AKFGSGMERELYRIVTKTYPDDLP----HEGTVPLV 285 Query: 292 LLWHKRNSHNPKIVWLRETIKNLYASM 318 LL HKR +P WL E I L M Sbjct: 286 LLQHKRTLGSPIHQWLSEKIVELARDM 312 >UniRef50_A5G2D8 Transcriptional regulator, LysR family n=1 Tax=Acidiphilium cryptum JF-5 RepID=A5G2D8_ACICJ Length = 303 Score = 197 bits (503), Expect = 3e-49, Method: Composition-based stats. Identities = 52/288 (18%), Positives = 95/288 (32%), Gaps = 17/288 (5%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L L +ER T+AA+R+N+ SA+S S+ L D PLFV S + T Sbjct: 1 MELRQLHHFVALAEERQFTRAARRVNIVQSALSTSIRALERELDAPLFVRSTRDVRLTGA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIM-LNALSKQIYQRYPQ 125 + ++ ++ L + L L + +QR+P Sbjct: 61 GEIFLEKARLAIEAVRDARSAVAEVQGLKRGTLKIGTVQSLPAFLDLPLLLARFHQRHPG 120 Query: 126 ATIKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 I+L +L D G +D F +H + ++ D + Sbjct: 121 IEIRLIQGSSSALADRTRAGGIDAAFFPVGTHLT----------DLVTTMIACDEVVLAC 170 Query: 185 RKDHPALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 + HP L+ +P + +D + G R A + + + L Sbjct: 171 PRGHPLEGLTGVTLEAIKDFPFVDFETGWGTRRLVDGRFGDAGIGRHTAFEVSDLDTMLK 230 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFT 291 + L +A P + + + L P + +P Sbjct: 231 LV--SLGLGIALLPETVV-VARDPDIGMARLSSPELCWELVVAHLPVA 275 >UniRef50_UPI0001C3136F transcriptional regulator, MarR family n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C3136F Length = 312 Score = 197 bits (503), Expect = 3e-49, Method: Composition-based stats. Identities = 50/313 (15%), Positives = 103/313 (32%), Gaps = 18/313 (5%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 LD+ + L+ + S++ AA +N TPSA+S+ +A L L P ++ T Sbjct: 2 LDIRRMRVLREVANRGSMSAAADALNYTPSAISQQVATLEREIGVALVERGPRSITLTDA 61 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNALSKQIYQRYPQA 126 ++ ++ + + + + LA ++ + R+P Sbjct: 62 GRALAEHAEIILARLEIAEMEVREIAGLRGGRLRLATFRTAGETIVARAITAFHARHPDV 121 Query: 127 TIKLRNWDYDS-LDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 ++L + + L I GEVD+G H ++ SS +L DV + L Sbjct: 122 ELRLVEGEPEDYLPLIKSGEVDLGLGFEYDHIPRLQVESSEE-----RLLMEDVIGLALP 176 Query: 186 KDHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 H +T L I S + + ++ G E + ++ + + Sbjct: 177 LRHRLAERETIELADLAGESWIGSTPRSSVHGFTEAICRDAGFEAEVKFETDDYHVAEAL 236 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 A + +A PR + F ++ +P Sbjct: 237 VAT--GVGIAFLPRLAA--------VTAHPEIVFRHVTPAPPARRVFAVYRAGGLRSPTT 286 Query: 305 VWLRETIKNLYAS 317 + E ++ + Sbjct: 287 SAMVELLEQIGRE 299 >UniRef50_A4W926 Transcriptional regulator, LysR family n=1 Tax=Enterobacter sp. 638 RepID=A4W926_ENT38 Length = 303 Score = 197 bits (503), Expect = 3e-49, Method: Composition-based stats. Identities = 49/316 (15%), Positives = 109/316 (34%), Gaps = 27/316 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++ LL + +E +AA+R+++ +S+++ +L LF + +S TP Sbjct: 2 IETRLLTQFIAVAEELHFNRAAQRLHMAQPPLSQAIRRLEQEIGVSLFERTNRSVSLTPA 61 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 V+ + + +++ + ++K + L S L K YP Sbjct: 62 GVTFLDSARDVLRLLDEGVEKIRRVSQGIEGHLTLTFISLAGYAPLLRALKNFRAAYPAV 121 Query: 127 TIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + + + +DA+ +G D+GF + ++ + + + L Sbjct: 122 SFTMEEATTQEQIDALEQGRADLGFMRPP---------GRTSPGLRFDAILREPVVIALP 172 Query: 186 KDHPALH-QTWNLDTFLRYPHISICW--EQSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 H + T L +S Q L + + G I+ + + + Sbjct: 173 AAHRLVDSGTVKLAALQNDHFVSPPRHLGQGFHDQLIQLCEAAGFRPHISQQARQLQTLV 232 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS--- 299 + A +A P + + +V PL D + V + W+ R++ Sbjct: 233 TLVAS--GFGVALLPASLAHEMRE---DVVFRPLEVDAP-DELKHVELLMGWNARSTSII 286 Query: 300 HNPKIVWLRETIKNLY 315 + L E I+ + Sbjct: 287 RDK----LIEEIRRVM 298 >UniRef50_A3IAK3 Transcriptional regulators, LysR family protein n=1 Tax=Bacillus sp. B14905 RepID=A3IAK3_9BACI Length = 304 Score = 197 bits (503), Expect = 3e-49, Method: Composition-based stats. Identities = 37/314 (11%), Positives = 101/314 (32%), Gaps = 26/314 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L + ++ + T+A + + +T S +S +++ L + L G+S T Sbjct: 12 VNLLQIEIFVKVVDMGNFTRAGEILAMTQSGISHNISSLESELGITLLNRGRNGISLTDS 71 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + +++ + + + + K + + S +L + + + Sbjct: 72 GERIIKHMRNILTEAESIKQETASILGIQNGKINIGSFSSFSSKLLPTIISRFRGEFKGI 131 Query: 127 TIKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 I + YD + + G+VDIGF+ + + + +D + L Sbjct: 132 EINFYDGSYDQITRWVEEGKVDIGFTSLSNPLD----------HLKTIPILNDRLVLTLP 181 Query: 186 KDHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 H + ++ I + + L+E I ++ + + + M Sbjct: 182 IHHHLAINGQVKVEDLQGEAFIMPKLGCEVS--VMKFLKEQEVSPNIQFNVEDNQTIIAM 239 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 + L + P YN + + + +++ + P + Sbjct: 240 VRE--GLGITIMPELALPYNLQGTIV---------KPLLPEPSREISIITRSKKQSLPAV 288 Query: 305 VWLRETIKNLYASM 318 +T + + Sbjct: 289 KAFIKTTMDCVKDL 302 >UniRef50_D2B6U1 DNA-binding transcriptional regulator CynR n=1 Tax=Streptosporangium roseum DSM 43021 RepID=D2B6U1_STRRD Length = 301 Score = 197 bits (503), Expect = 4e-49, Method: Composition-based stats. Identities = 33/285 (11%), Positives = 84/285 (29%), Gaps = 18/285 (6%) Query: 9 DLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLM 68 +L L L + + + T+AA+ + ++ +S+ + +L L S + T Sbjct: 4 ELRHLRYLIAVAEHGNFTRAAEDLRISQPTLSQQIKQLERAVGVQLLDRSGRSVRLTDAG 63 Query: 69 VSMEQNLAEWMQMSNLLLDKPHH-QTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQAT 127 + ++ + LAA ++ L +++ R+P T Sbjct: 64 EAYVHYARRALRDLSAAERAVFDVADLSRGSLRLAATPTFTAYLIGPLIAEMHARHPGIT 123 Query: 128 IKLRNWDYDSLD-AITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRK 186 + ++ D ++ + E+D+G + + H I LF + + + Sbjct: 124 LDVKEMTQDRIESGLLADELDLGIAFCDRHLP----------GIGGTALFMETLSLVVSA 173 Query: 187 DHPALH--QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 + + + E + +D + I + + + + Sbjct: 174 HDSDGEHLRPMPVRDLATRRLALLSGEFATRGHIDAYFRRQSVSPRIVVEANSIQALIEI 233 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVP 289 + + P + L + L L Sbjct: 234 VQRSS--VATVLPDAVTH--DHPGLSPIPLAPALPTRTVTLLRRE 274 >UniRef50_D1PPF0 Transcriptional regulator, LysR family n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PPF0_9FIRM Length = 292 Score = 197 bits (503), Expect = 4e-49, Method: Composition-based stats. Identities = 47/309 (15%), Positives = 96/309 (31%), Gaps = 21/309 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 + + L + Q + T AA+ +++T AV++++ +L ++ LF LSPT Sbjct: 1 MTIRHLRIFVAVYQAENATHAAEELHMTQPAVTRAIQELEQYYGTRLFERMYRHLSPTEC 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQAT 127 + + + + + + A L +L L+ + Q P Sbjct: 61 ARRLYPQAVHLLDSFDRIETGLRNWDSM-GIVRVGATVTLGSTVLPGLAHRFAQENPGIQ 119 Query: 128 IKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRK 186 +++ + +L A+ +D+ + E + +D+ C + Sbjct: 120 LQVTVANGGTLTAALCENRLDLALLESTPSLP----------DLHTEEIGTDLLCAVMTP 169 Query: 187 DHPA-LHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMA 245 P QT L+ P + + AL + L+ G I E L Sbjct: 170 ADPLAAGQTVTLEQLSAAPLLVREEGSTARAALQSALEAQGLPLHIVWESVSTEALLQ-- 227 Query: 246 AQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIV 305 A + L +A P + + L WHK + + Sbjct: 228 AAAEGLGVAVLPEPRVKNAAAAGIVCTRP------IDGQALRRHRVAAWHKEKYLSESMQ 281 Query: 306 WLRETIKNL 314 + Sbjct: 282 RFLALCRRT 290 >UniRef50_C6CDY7 Transcriptional regulator, LysR family n=10 Tax=Enterobacteriaceae RepID=C6CDY7_DICDC Length = 310 Score = 197 bits (503), Expect = 4e-49, Method: Composition-based stats. Identities = 49/312 (15%), Positives = 107/312 (34%), Gaps = 26/312 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L + R T+AA+ + ++ +S+ + KL PLF G+ T Sbjct: 1 MELRYLRYFVAVASARHFTRAAENLGISQPPLSQQIQKLEREIGTPLFKRMARGVEMTEA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQT-PRGLKFELAAESPLMMI-MLNALSKQIYQRYPQ 125 + Q+ + +++ +++ H + + M+ +L ++ Q +P Sbjct: 61 GAAFYQDACHILALTDSAIERVHSIARGEAGAINIGFSCAVTFHPMVLSLLQRYRQHFPN 120 Query: 126 ATIKLRNWD-YDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 + R D LD++ +DI F L D E+L ++ + L Sbjct: 121 VRLNPREEHIQDILDSLRNRTIDIAFIRLPCD---------LNDEFDGEILTNEAFQLVL 171 Query: 185 RKDHPALHQT-WNLDTFLRYPHISICWE--QSDTWALDNVLQELGRERTIAMSLPEFEQS 241 HP QT LD + P I E + G + + P + Sbjct: 172 PAGHPLSAQTCIALDQLKQEPLIIFPRELCPGLYDLIVRTCYLSGYQPKLNPLAPHLTAT 231 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 + M A + P+ + + ++ L ++W +R+ + Sbjct: 232 INMVAT--GFGVTFVPQSMSCIQNSS--------VSYHDTTTPHLTTQIAVIW-RRHDRS 280 Query: 302 PKIVWLRETIKN 313 ++ + + + Sbjct: 281 VTLMHMIQLLHQ 292 >UniRef50_B5XSE9 Transcriptional regulator, LysR family n=6 Tax=Enterobacteriaceae RepID=B5XSE9_KLEP3 Length = 296 Score = 197 bits (502), Expect = 4e-49, Method: Composition-based stats. Identities = 47/313 (15%), Positives = 106/313 (33%), Gaps = 25/313 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 + L L ++ +E + +AA+R+++ A+S+ + +L LF + L+ T Sbjct: 1 MSLRALRHFVVVAEELHMHRAAERLHIAQPALSQQIKQLEQRLGVVLFSRANRRLTLTAA 60 Query: 68 MVSMEQNLAEWMQMSNLL-LDKPHHQTPRGLKFELAAESPLMM-IMLNALSKQIYQRYPQ 125 + Q ++M++ LD + L S M L L +++ +P Sbjct: 61 GEAFLQKTRLALEMADQAVLDAQRTARGEQGRLHLGYVSSAMYDSKLPGLLRELRADWPG 120 Query: 126 ATIKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 + L D L +A+ +DI L+S P A+ + C+ L Sbjct: 121 IELSLVQGDVQMLYEALLDLRLDIAIIRAP--------LASPPDALVVRPFVREKLCLAL 172 Query: 185 RKDHPALH-QTWNLDTFLRYPHISI--CWEQSDTWALDNVLQELGRERTIAMSLPEFEQS 241 + HP NL + IS+ + + G + + + Sbjct: 173 YQQHPLAGVGALNLASLRTDNWISLDDPQGTGLEQVFIDACRVAGFTPQVVQRINDVTSM 232 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 + + + + L + + + L Q + E ++++H+ + Sbjct: 233 ISLVSAGVGVALVPVSARALRLDNVVYIDL----------QDRLAESELSMVYHRHF-RS 281 Query: 302 PKIVWLRETIKNL 314 + + + Sbjct: 282 AVVRKVISLLNAA 294 >UniRef50_A4BHD6 Transcriptional regulator lysR family protein n=1 Tax=Reinekea blandensis MED297 RepID=A4BHD6_9GAMM Length = 298 Score = 197 bits (502), Expect = 4e-49, Method: Composition-based stats. Identities = 49/314 (15%), Positives = 104/314 (33%), Gaps = 26/314 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +DLN L + + S ++A +R+ +T A+SK +A L + LF + T Sbjct: 1 MDLNSLEAFLTVAELGSFSRAGERLFLTQPAISKRIANLESQLGTALFDRIGREVYLTEA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNALSKQIYQRYPQA 126 ++ + + T + LA+ + + L + ++ P A Sbjct: 61 GQMLQNRAQTLIDELRDIQSSVTQLTSNDIRQLNLASSHHIGLHYLGPILRRFVSNNPSA 120 Query: 127 TIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + +R +++A+ + +++I + S L + L+ D + Sbjct: 121 KLDVRFMESEQAVNALLKRDIEIALTTIPSP---------LHRDLQATTLWQDKLHFVVS 171 Query: 186 KDHPALHQ--TWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 KDHP + L+ I + + ++ + MS+ E Sbjct: 172 KDHPLAGRKDRLRLNELAHLTAILPDRQTTTFQIIEKTFERHHIPLKRVMSVNYLETIRA 231 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 + NL + P N L ++ +L ++ H+R + + Sbjct: 232 LV--SHNLGWSLLPEVMLNEN-----------LTCLSIERVELSRNLGIIQHRRRTVSRG 278 Query: 304 IVWLRETIKNLYAS 317 L E S Sbjct: 279 TRALIELAVEASQS 292 >UniRef50_P52698 HTH-type transcriptional regulator phcA n=16 Tax=Burkholderiaceae RepID=PHCA_RALSO Length = 347 Score = 197 bits (502), Expect = 4e-49, Method: Composition-based stats. Identities = 80/324 (24%), Positives = 134/324 (41%), Gaps = 28/324 (8%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 + +D LL+ L+ +R+ T A+++++T AVS SL +LR FDDPLF+ P GL+P Sbjct: 1 MVNVDTKLLVIFVELLSKRNATYVAEKMHMTAPAVSHSLGRLREIFDDPLFIRVPHGLTP 60 Query: 65 TPLMVSMEQNLAEWMQMSNLLLD-KPHHQTPRG--LKFELAAESPLMMIMLNALSKQIYQ 121 TP + + + E + + + + P F ++ L + + ++ + Sbjct: 61 TPKALELGPKVREMLDLWAAINEGDIATFDPLEAAGTFNISFAGTLGDALFDRFLLRVKR 120 Query: 122 RYPQATIKLRNWDY--DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 P ++L + A+ E+D+ FS + I EV+ S Sbjct: 121 LAPGLQVRLTESSSWEADVAAMRSNELDLAFSP----------FPTRHPEIVEEVVTSFN 170 Query: 180 PCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWA------LDNVLQELGRERTIAM 233 V RKDHP L +LD +L HI I T A LD LQ+ G +R M Sbjct: 171 MWVCARKDHPVLKDHCSLDQYLECEHIFIAQGNPGTRAAPSLIPLDYALQQRGLKRHSTM 230 Query: 234 SLPEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLL 293 ++ + +AAQ D + + + L LP + +L Sbjct: 231 TVHAWRTQAEVAAQTDMI-FTVNSLMKDLVCETYNLNAFPLPSELETVLG------LNML 283 Query: 294 WHKRNSHNPKIVWLRETIKNLYAS 317 WH+ + +P +VW R K + A Sbjct: 284 WHRSRNTHPMLVWARNLFKQVVAE 307 >UniRef50_Q46SX0 Transcriptional regulator, LysR family n=4 Tax=Burkholderiales RepID=Q46SX0_RALEJ Length = 300 Score = 197 bits (502), Expect = 4e-49, Method: Composition-based stats. Identities = 42/314 (13%), Positives = 106/314 (33%), Gaps = 23/314 (7%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 S L L + ++ S AA+ ++++ A+S+ + KL L + + Sbjct: 1 MSRINFGLEDLQAFVAIAEKGSFRMAAEALHISQPALSRRIEKLEMTLGSRLLERTTRRV 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNALSKQIYQ 121 T + + + + + + + + +AA + L + Sbjct: 61 DMTHIGRQFLEEARAALDILDSAVLRLGDEVGLQRGLVTVAAIPSAALHFLPDAICRFGN 120 Query: 122 RYPQATIKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 R+P +++ + + + L ++ GE D G + + I++ + ++ Sbjct: 121 RHPGVRVRVIDENANAVLASVLSGESDFGLNF----------MGGQEPNIEFRAIRAEPY 170 Query: 181 CVWLRKDHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFE 239 + LR+DHP + + +S+ + + ++N + L R TI Sbjct: 171 RLALRRDHPWAGRDCIAWEELAGQRMVSVSKQSGNRALIENAIAHLTRRPTIHYEANHVV 230 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 L + + + + + +L + LV ++ L+ + Sbjct: 231 GVLALVEAGLGMAVLPGMSLPRDHPRLCGIELVEP----------SVDRVLALIRRRDRP 280 Query: 300 HNPKIVWLRETIKN 313 P L E + + Sbjct: 281 LQPAAEALYEILTS 294 >UniRef50_A6TWD6 Transcriptional regulator, LysR family n=1 Tax=Alkaliphilus metalliredigens QYMF RepID=A6TWD6_ALKMQ Length = 305 Score = 197 bits (502), Expect = 4e-49, Method: Composition-based stats. Identities = 52/309 (16%), Positives = 114/309 (36%), Gaps = 24/309 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +D+ L + + + T+AAK + V SAVS+ +A L + LF + + T Sbjct: 1 MDIRQLRYFIAVAEHLNFTEAAKHLFVAQSAVSQQIADLENKIEVKLFDRNKRSVKLTHA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQT-PRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + + + + + K ++ L L + + Y Sbjct: 61 GGVLLKEAIDIVSRAEEAVIKTQEAELGIIGSLKIGFLGYTEKNFLPFLIRGFRRNYQNI 120 Query: 127 TIKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 ++L +++ L D+++ GE+DIGF+ ++ LF++ + + Sbjct: 121 DLQLDQYNHGILIDSLSTGELDIGFTLSFGLDNIG--------GLEKRSLFTEPISIVMH 172 Query: 186 KDHPALHQ-TWNLDTFLRYPHISICWEQSDTWA--LDNVLQELGRERTIAMSLPEFEQSL 242 DHP HQ + NL + I++ +S + G I L Sbjct: 173 CDHPLAHQSSINLGDLAQERFIALNRHESPQGFNQTLLICANKGFSPNIVSGPKLLHTVL 232 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 + + +A P+ +++ + L F + + + ++ + W K ++ NP Sbjct: 233 LLVDAE--MGIAILPKSLEHHA--------SPSLRFIDIEGEAVQHELVVAW-KTSNQNP 281 Query: 303 KIVWLRETI 311 I + + Sbjct: 282 SIPLFLKEL 290 >UniRef50_C0ADM3 DNA-binding transcriptional regulator CynR n=2 Tax=Bacteria RepID=C0ADM3_9BACT Length = 328 Score = 197 bits (502), Expect = 4e-49, Method: Composition-based stats. Identities = 42/332 (12%), Positives = 100/332 (30%), Gaps = 38/332 (11%) Query: 6 TTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPT 65 +++ LL + + + S T+AA I + +S+ + +L PLF + T Sbjct: 7 DSVEFRHLLYFRAVAEAGSFTRAAAIIGLRQPTLSQQIKQLEDELGAPLFHRARRMCRLT 66 Query: 66 PLMVSMEQNLAEWMQMSNLLLDKPHHQTP-RGLKFELAAESPLMMIMLNALSKQIYQRYP 124 P + + L + R +AA L ++ + + +P Sbjct: 67 PAGEMLLPYARRVLGEMENLRHSLDDLSGLRRGSLTVAALPVLSHRVMPLAVARFHAEHP 126 Query: 125 QATIKLRNWD-YDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVW 183 +++ D A+ +G V++G +S + ++LF + Sbjct: 127 DIRVRMLEMSVDDMEAALVQGTVEMGIGYMPPAGKS----------LRAQLLFQEELVAV 176 Query: 184 LRKDHPALHQT--------------------WNLDTFLRYPHISICWEQSDTWALDNVLQ 223 +R+D P +++ +R P I++ + N Sbjct: 177 VREDDPLAQGGGGGGGKAARGGRERGDTSRWVSMEALMRRPLIALPPGHGTRTMMLNAFA 236 Query: 224 ELGRERTIAMSLPEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQ 283 + R AM E L + + + + L + ++ Sbjct: 237 SVRRVARFAMEAGSVEVLLQVVRECGGPGIVPSSALWGRTGNELA-GCAVLRVERPGLRR 295 Query: 284 KKLEVPFTLLWHKRNSHNPKIVWLRETIKNLY 315 + + + + P ++ + Sbjct: 296 QVGFLNLSGV-----HTRPAAEAFIPIVQAVV 322 >UniRef50_A4A328 Transcriptional regulator, lysr family protein n=1 Tax=Blastopirellula marina DSM 3645 RepID=A4A328_9PLAN Length = 301 Score = 197 bits (502), Expect = 4e-49, Method: Composition-based stats. Identities = 40/307 (13%), Positives = 90/307 (29%), Gaps = 21/307 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L + S T+ A + S+V+ + +L PLF L+ T Sbjct: 1 MELKTLATFRAAAATLSFTQTAAALGYVQSSVTAQVQQLERELGVPLFDRIGNRLALTEA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQAT 127 + + +++ P ++ ++ +L ++ + Q++P Sbjct: 61 GQRLVGYADRLLALADEARAAVSTTAPV-GTLSISGPETIVSYLLPSILAKFRQQHPAVW 119 Query: 128 IKLRNWD-YDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRK 186 ++ + + G++D F +P +++ L + + Sbjct: 120 VRCVPSPIGELKRRVLDGQLDAAFV---------LEEPVVPGSLNVAPLRPEPLALIAAP 170 Query: 187 DHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRER-TIAMSLPEFEQSLFM 244 HP + + P + + + L A E Sbjct: 171 SHPLVKKRRVQARDLAGEPILFTETGCTYRNKFEQALHAAHAHPGQKAQEFSSVEAIKRY 230 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 A L +A P + + L +L V L+W +P + Sbjct: 231 VAA--GLGIAALPSVAVEAERKSRT------LAVLAWDGPQLTVHTQLVWSATRWTSPAL 282 Query: 305 VWLRETI 311 ET+ Sbjct: 283 SAFVETV 289 >UniRef50_A4F849 LysR-family transcriptional regulator n=7 Tax=Actinomycetales RepID=A4F849_SACEN Length = 301 Score = 197 bits (502), Expect = 4e-49, Method: Composition-based stats. Identities = 48/313 (15%), Positives = 94/313 (30%), Gaps = 23/313 (7%) Query: 7 TLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTP 66 +D L+ + +E S+T+AA+R+ V+ A++K + +L A LF S G++PT Sbjct: 2 DVDTRLVRYFAAVAEEGSLTRAAERLYVSQPALTKQIKQLEALLGVRLFTRSRTGMAPTE 61 Query: 67 LMVSMEQNLAEWMQMSNLLLDKPHH-QTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQ 125 + + + + L + + + + P Sbjct: 62 AGQVLAERAPALLATCDEALRDTKSAARRAARVLRIGFLASAANEPTQDIIARFGVVRPG 121 Query: 126 ATIKLRNWD-YDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 + +R + ++ GEVD + + EVL ++ CV L Sbjct: 122 WRVDMRQAAWSEPTAGLSEGEVDAALLRLPFPGQEA---------LRVEVLLTEPRCVAL 172 Query: 185 RKDHPAL-HQTWNLDTFLRYPHISICWEQS-DTWALDNVLQELGRERTIAMSLPEFEQSL 242 +HP P ++ E + GR I S + + L Sbjct: 173 PANHPLATRDAIPFRELWDEPFVAAPPETGAFRDYWLAADERDGRPPRIGASTDQPDDWL 232 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 A + +A AP + + + ++W NP Sbjct: 233 QAIA--NGYGVALAPESAARFYSRPGVVYRPV--------IGVSPSRVGIVWPPAADTNP 282 Query: 303 KIVWLRETIKNLY 315 + Sbjct: 283 VVQDFVACCLEAV 295 >UniRef50_A6SXB4 Transcriptional regulator, LysR family n=1 Tax=Janthinobacterium sp. Marseille RepID=A6SXB4_JANMA Length = 302 Score = 197 bits (502), Expect = 5e-49, Method: Composition-based stats. Identities = 48/310 (15%), Positives = 91/310 (29%), Gaps = 22/310 (7%) Query: 7 TLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTP 66 + L L + + T AA+ + V+ S++S + L LF L T Sbjct: 2 NITLRQLRAFVTVAETGKFTLAAELLGVSQSSLSLLVRDLENLLGLRLFDRHTRRLELTD 61 Query: 67 LMVSMEQNLAEWMQMSNLLLDKPHH-QTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQ 125 + + + +++ + + +AA S ++ L K +RYP Sbjct: 62 AGHDLLPVAQKTLMDLLSVVENSRDLLALKKGRVTIAAGSLHAATVIPDLLKSFNRRYPG 121 Query: 126 ATIKLRNWDYDSLDAIT-RGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 + + + + + G VD+G S +V+ D V + Sbjct: 122 IRVIVEDVAERQVRELIVAGTVDVGIGMTLDGDNSML----------AQVIGRDKYAVLM 171 Query: 185 RKDHPALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 K+H + +T I + LD L +G T A + Sbjct: 172 HKEHQLMRKKTITWQDIAATQPILLKPPSLIRTYLDQHLARVGITLTPAYEVALPWTMTG 231 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 M + +A + L L +E +L +P Sbjct: 232 MVRA--GVGVAIVTTGVLPVAERMGLELR-------TISAPVIERELAVLTRAGYPLSPA 282 Query: 304 IVWLRETIKN 313 LR + Sbjct: 283 AQSLRTHLLE 292 >UniRef50_Q3IDU2 Putative hydrogen peroxide-inducible genes activator similar to OxyR (But also to other LysR like activators) n=2 Tax=Alteromonadales RepID=Q3IDU2_PSEHT Length = 302 Score = 197 bits (502), Expect = 5e-49, Method: Composition-based stats. Identities = 34/257 (13%), Positives = 73/257 (28%), Gaps = 15/257 (5%) Query: 7 TLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTP 66 ++L L ++ + + KAA V+ +S + KL LF S ++ T Sbjct: 2 NMNLKDLEYVKAIAHFKHFRKAADACFVSQPTLSGQVKKLEQELGVTLFDRSTKQVTLTA 61 Query: 67 LMVSMEQNLAEWMQMSNLLLD-KPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQ 125 + + ++ + +L + P K + + +L L + + + Sbjct: 62 KGERLLTQINVILEQTQILKELAATSNEPLQGKLTIGIIPTIAPYLLPVLLTSMKEAFIN 121 Query: 126 ATIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 + L+A+ GE+D + L+ + V + Sbjct: 122 SRFSFIEMQTATILEALDNGELDFAILADVPELKKY----------HSVNLYKEDFLVAV 171 Query: 185 RKDHPALHQ-TWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 D+ Q L + + G + E L Sbjct: 172 SHDNSLAQQKKVALRELQGCSLLMLSDGHCFKDQAQQFCFSAGVNVSSQYQGNSLETLLA 231 Query: 244 MAAQPDNLLLATAPRYC 260 + A D + P+ Sbjct: 232 LVAMDDG--VTFVPKLA 246 >UniRef50_C1DSG7 Transcriptional regulator, LysR family n=1 Tax=Azotobacter vinelandii DJ RepID=C1DSG7_AZOVD Length = 299 Score = 197 bits (502), Expect = 5e-49, Method: Composition-based stats. Identities = 48/317 (15%), Positives = 92/317 (29%), Gaps = 28/317 (8%) Query: 1 MKKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPL 60 M I+ L L+ + S T+ +++++++ A+S S+ KL L + Sbjct: 1 MLMDIS---FRQLRAFILIAETSSFTRTSEQLHLSQPALSYSIRKLEDALGLRLLARNTR 57 Query: 61 GLSPTPLMVSMEQNLAEWMQMSNLLLDKPHH-QTPRGLKFELAAESPLMMIMLNALSKQI 119 + TP ++ + + H L A L + Sbjct: 58 SVELTPAGEHFLPQARRMLRDMDDAIRDAHEALNLIRGTIRLGALPTAAASFLPGVIAAF 117 Query: 120 YQRYPQATIKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSD 178 + +P I LR+ + + GEVD G + L + V Sbjct: 118 GRDHPGVKISLRDGRAGEVKAWVQNGEVDAGITSLPEDLSGLGFEPLLDDNLVLLV---- 173 Query: 179 VPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEF 238 + A + T P+I++ + S D L+ LG A + Sbjct: 174 -------RQEGASKEPDTWKTL---PYIALTADTSIRPLADEALRHLGVTTQPAWEVAHM 223 Query: 239 EQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRN 298 + + + + + P C + L LP+ LL K Sbjct: 224 STAAALVRE--GIGFSLLPASCTTFL-HIGADLSVLPIEQPT------RRSLGLLQRKPI 274 Query: 299 SHNPKIVWLRETIKNLY 315 P + + Sbjct: 275 GQTPSMKAFLSHLNRCL 291 >UniRef50_B5HHH0 YwqM n=1 Tax=Streptomyces pristinaespiralis ATCC 25486 RepID=B5HHH0_STRPR Length = 297 Score = 197 bits (502), Expect = 5e-49, Method: Composition-based stats. Identities = 49/312 (15%), Positives = 89/312 (28%), Gaps = 20/312 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +++ LL+ + + S T+AA + S+V+ + L + LF + T Sbjct: 1 MEIRLLVTFEKVAAHLSFTQAAAELKYAQSSVTSQVRSLESSLGTELFDRLGSRIRLTEA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQAT 127 + +++S + L L L + + RYP+ Sbjct: 61 GERLVPYARRIIELSEEARAAVAETDEPAGTINIGTMESLTSYRLPELLELFHHRYPRIK 120 Query: 128 IKLRN-WDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRK 186 + LR ++ A+ +G DIGF + EVL + + Sbjct: 121 LSLRPTLGDETRRALRQGVYDIGFLMERETE---------HTGLRSEVLAPEPLVLVAAP 171 Query: 187 DHPALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMA 245 HP + +N L+E M E + Sbjct: 172 GHPLAGAGGLTTPDLADAQLVGTEPGCPYRDLFENELRERTGAPPPFMEFGTIEATKRGV 231 Query: 246 AQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIV 305 A L +A PR + LVALP + + W + + Sbjct: 232 AA--GLGVALLPRMTVRAELASGV-LVALPWEPPF------RLHTQVAWREGKRLPRHVR 282 Query: 306 WLRETIKNLYAS 317 + L Sbjct: 283 LFIDETVRLVRE 294 >UniRef50_Q21B31 Transcriptional regulator, LysR family n=2 Tax=Alphaproteobacteria RepID=Q21B31_RHOPB Length = 364 Score = 197 bits (502), Expect = 5e-49, Method: Composition-based stats. Identities = 45/310 (14%), Positives = 88/310 (28%), Gaps = 23/310 (7%) Query: 9 DLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLM 68 + L + T AA+ +NV+ ++ + +L LF + TP Sbjct: 6 SFRQVRAFLALARHLKFTSAAQELNVSQPTLTVQINQLEQQLGIRLFDRDKRRVELTPAG 65 Query: 69 VSMEQNLAEWMQMSNLLLDKPHHQT-PRGLKFELAAESPLMMIMLNALSKQIYQRYPQAT 127 ++ + + +L T + +AA + L K ++ P Sbjct: 66 RNILPLMERLSLNMDEVLLAASDLTYAKRGIIRVAALPSVAASFLPRGIKDFREQNPGII 125 Query: 128 IKLRN-WDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRK 186 I + + + + + EVD G S +I + SD C + Sbjct: 126 IDVWDVVGEEIIKLVKAEEVDFGIGTH----------FSADKSIKVQDYLSDSLCAFFPV 175 Query: 187 DHPA--LHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 +HP + P + S + + G E I M +L M Sbjct: 176 EHPLNTAASVVYVRDVASCPLVVTRKNSSVRVLFERSMAREGCELNIVMETNYMSTALSM 235 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 A + +A P + L + P ++ + P Sbjct: 236 ARA--GVGVAILPSTAVEAGNMAGLSFKPIDPP-------HFNRRVGIICKADRTLQPIA 286 Query: 305 VWLRETIKNL 314 E + + Sbjct: 287 SHFVEELLRM 296 >UniRef50_B5XRQ2 Transcriptional regulator, LysR family n=4 Tax=Klebsiella RepID=B5XRQ2_KLEP3 Length = 307 Score = 197 bits (502), Expect = 5e-49, Method: Composition-based stats. Identities = 62/319 (19%), Positives = 119/319 (37%), Gaps = 21/319 (6%) Query: 2 KKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLG 61 + + +DLNLL L +L +E SVT+ A+ +++ A+S +L +LR FDDPLFV S G Sbjct: 6 ENDFSRIDLNLLTVLMVLYREASVTRTAEVLHLGQPAISGALKRLREMFDDPLFVRSARG 65 Query: 62 LSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGLK--FELAAESPLMMIMLNALSKQI 119 + PTP ++ +L M+ + + P + F + ++ L + Sbjct: 66 MLPTPRAQALMTDLQPLMENLHSAMFGAGEFVPARAQQLFRIGLSDWSEHWLMPQLLPGL 125 Query: 120 YQRYPQATIKLRNWDYDSLDAITRGE-VDIGFSGRESHPRSRELLSSLPLAIDYEVLFSD 178 Q P +++ D + + E +D+ S + + + + Sbjct: 126 MQEAPGVSLQSIAADPFQVRQLLEEERIDVAVSVNKQSRGEVVSEPVMTMGVTT------ 179 Query: 179 VPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEF 238 ++ F+ + H+ + + ++ +D L G R + + F Sbjct: 180 ----LWSPQQIPCRGPLSVSDFVAWEHVMVAYRETGHGEIDRQLASQGLARRVRFATQNF 235 Query: 239 EQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRN 298 + L Q + H L A P+ + E +L HKR Sbjct: 236 STFPLL-LTTLPLFATVPQGLAQRWQAQHALRADAPPVTYP-------EFTLCILRHKRR 287 Query: 299 SHNPKIVWLRETIKNLYAS 317 + +P + WL +K Sbjct: 288 AQDPALNWLVTKLKQAMRG 306 >UniRef50_B0TCS4 Transcriptional regulator, lysr family n=2 Tax=Firmicutes RepID=B0TCS4_HELMI Length = 310 Score = 197 bits (502), Expect = 5e-49, Method: Composition-based stats. Identities = 49/301 (16%), Positives = 92/301 (30%), Gaps = 14/301 (4%) Query: 14 LCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSMEQ 73 L+ +E S++KAA+++ +T AVS+S+ +L LF +P G+ T + Sbjct: 9 RAFYLVAREGSISKAAEQLYITQPAVSRSIQQLEEKLGCVLFFRTPKGVKLTKEGELLFP 68 Query: 74 NLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNALSKQIYQRYPQATIKLR- 131 + + + T + +AA + L K+ + YP I + Sbjct: 69 YIEQAFNFIAVGEKTLAQITALENGEITIAAGDTICKNYLPPHLKRFKEAYPGIRIHVTN 128 Query: 132 NWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPAL 191 ++ + +G+VDIGF +EVL V K Sbjct: 129 ENTPSTIRLLKKGKVDIGFVHAPVVNDPSATALLS----IHEVLQIQDCFVVGEKYKELA 184 Query: 192 HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQPDNL 251 + +L+ RYP I + S ++N + E L +FE + A Sbjct: 185 ARPRSLEELARYPLILLEKGSSSRIYIENFFAQHNIELKPEFELSDFELLIRFAQIDFGA 244 Query: 252 LLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWLRETI 311 + + L + + + Sbjct: 245 ACVIKNFVADELARGSLYEIQPL--------TPIPPRHVGVAHLQTIPLRTAAKAFLSFL 296 Query: 312 K 312 Sbjct: 297 L 297 >UniRef50_Q0VH46 Putative LysR type regulator n=3 Tax=Proteobacteria RepID=Q0VH46_9PSED Length = 308 Score = 197 bits (501), Expect = 5e-49, Method: Composition-based stats. Identities = 69/312 (22%), Positives = 115/312 (36%), Gaps = 21/312 (6%) Query: 9 DLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLM 68 DLNLL + L ++ SV+ AA + VT AVS SL +LR + D LF + PTP Sbjct: 11 DLNLLFAFEALWRDHSVSIAADNLGVTQGAVSSSLKRLRQEYGDRLFTVVGRRMEPTPFA 70 Query: 69 VSMEQNLAEWMQMSNLLLDKPHHQTPR--GLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 V + L E + + + +P+ F + + L + K + + P + Sbjct: 71 VQIAPTLLEALDLVREAQSRALEFSPQHCRKVFTVRTRDIGEAVCLPTILKMLQTQAPMS 130 Query: 127 TIKLRNWD-YDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 I ++L ++ G +D+ L +L I ++ S LR Sbjct: 131 RINTVASSVEETLIGLSTGRIDLAIGY----------LPTLKTDIHRTIVSSQHYVCALR 180 Query: 186 KDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMA 245 + HP L+ FL H+ + + L+ L E G I + +P++ + + Sbjct: 181 RGHPLADAELTLERFLAQQHLLVETGGTGHVLLERALIEAGARHNIGVRIPQYLSAPHLL 240 Query: 246 AQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIV 305 + D L + P PL E L WH R +P+ Sbjct: 241 LESDMLWV--VPNVLGKTLSRF------FPLLLKPLPLVLPEFDIALYWHDRFHRDPQNK 292 Query: 306 WLRETIKNLYAS 317 W RE + Sbjct: 293 WFREMLAAALRE 304 >UniRef50_B7RZD5 LysR substrate binding domain protein n=1 Tax=marine gamma proteobacterium HTCC2148 RepID=B7RZD5_9GAMM Length = 300 Score = 197 bits (501), Expect = 5e-49, Method: Composition-based stats. Identities = 42/311 (13%), Positives = 93/311 (29%), Gaps = 28/311 (9%) Query: 6 TTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPT 65 + +DL L + Q + A+++++ AVS ++ KL LF S ++ T Sbjct: 11 SGVDLRKLEIFAAVAQSGGFSAGAEQLHMAQPAVSIAVRKLEDSLGVTLFDRSSRSIALT 70 Query: 66 PLMVSMEQNLAEWMQMSNLLLDKPHHQ-TPRGLKFELAAESPLMMIMLNALSKQIYQRYP 124 + +Q L + ++ S L L L + Sbjct: 71 AEGEQLLGRAQSILQQVQDLAQSAGDLSDLLRGELSISCPSMLATYFLPDLLSGFLTEHS 130 Query: 125 QATIKLRN-WDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVW 183 T + + + R ++++G + ++ L + V Sbjct: 131 GLTASVTQAGTTQIEEMLLRDDIELGVTTTSGTE-----------DLERLPLIKEQMVVC 179 Query: 184 LRKDHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 + ++HP ++ N P + LD + +E E + + + Sbjct: 180 VAENHPWAQRSHLNTQELHNTPMVVYESGYFIRAQLDQLCREAAVEPELRLQSNFLPLLV 239 Query: 243 FMAAQPDNLLLAT-APRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 M Q + + + + +PL +EVP L K + + Sbjct: 240 RMVKQ--GIGVTVGLRTMAEQEPGIAGIPLTP-----------GVEVPMALAKRKGRTIS 286 Query: 302 PKIVWLRETIK 312 + + Sbjct: 287 RANQAFLDWVA 297 >UniRef50_A8LRQ2 Transcriptional regulator, LysR family n=1 Tax=Dinoroseobacter shibae DFL 12 RepID=A8LRQ2_DINSH Length = 317 Score = 197 bits (501), Expect = 5e-49, Method: Composition-based stats. Identities = 64/322 (19%), Positives = 111/322 (34%), Gaps = 33/322 (10%) Query: 1 MKK-SITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSP 59 MK I LD L + SV++AA ++ +T S S L +LR DPLFV S Sbjct: 20 MKDLDIYGLDGRQLKLFLCVFDTVSVSRAADQLGITQSTASHGLERLRKALGDPLFVKSG 79 Query: 60 LGLSPTPLMVSMEQNLAEWMQMSNLLLDKPH-HQTPRGLKFELAAESPLMMIMLNALS-- 116 G++PT + + + L F +A +L L Sbjct: 80 RGIAPTDTAKELAPRVRAVLIGLEGLRTSATYDPAQDTGAFRIATNVT---EILPKLIEI 136 Query: 117 -KQIYQRYPQATIKLRNWDYDS--LDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYE 173 +I + P TI + + ++ G D+ + L S P + E Sbjct: 137 KARICKAAPHVTIHFHDMGSRVNAGELLSAGAADLVIA---------VSLPSYPSLLLAE 187 Query: 174 VLFSDVPCVWLRKDHPALHQTW-NLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIA 232 L+SD + P +++ F+ H ++ + S ++ L+ G R I Sbjct: 188 RLYSDRSVCYYC---PKQRGPIESVEDFVEAKHAALDFGASIKSSVGQELERQGIIRRIR 244 Query: 233 MSLPEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTL 292 M+ P + D + + V + + + Sbjct: 245 MTAPNSHTLAELMRDSDYVATMPLRLH----------KTVFKDFSYSTPPMALPPITHDM 294 Query: 293 LWHKRNSHNPKIVWLRETIKNL 314 LWH RN + + WLRE +++ Sbjct: 295 LWHVRNDNAARNSWLREVVRST 316 >UniRef50_A6T102 Transcriptional regulator, LysR family n=1 Tax=Janthinobacterium sp. Marseille RepID=A6T102_JANMA Length = 305 Score = 197 bits (501), Expect = 5e-49, Method: Composition-based stats. Identities = 49/312 (15%), Positives = 99/312 (31%), Gaps = 22/312 (7%) Query: 7 TLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTP 66 L L L + + T AA+R+++T SA+S + +L + LF + T Sbjct: 2 NLTLRQLRAFVAVAELSQFTLAAERLHITQSALSMLIRELEKELELKLFDRHTRMVRLTE 61 Query: 67 LMVSMEQNLAEWMQMSNLLLDKPHH-QTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQ 125 + + + + + + +A + L + +L ++ QR+P Sbjct: 62 HGEEFLLTARRVLSELEVAVMQSRESVNYKRGRVAVACSTVLAVTLLTPFMREFAQRHPG 121 Query: 126 ATIKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 + LR+ +S+ + G+VD + + I +FSD + + Sbjct: 122 IKLMLRDVAEESIKKRLLNGDVDFSVGTQLNPES----------EISELPIFSDHFVLLM 171 Query: 185 RKDHPALHQ-TWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 K HP Q L +YP I++ S L+ L+ L IA + Sbjct: 172 PKGHPLTKQTRIPLQAISQYPVIAMAPSSSIRAVLEAHLKRLDITLNIAYEASFPSTIIA 231 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 M + + + P + + + + S +P Sbjct: 232 MVR--NGMGITILPANAHQLTSTQGIVVRNF-------GKSNFTRTVCTFQLRNRSLSPA 282 Query: 304 IVWLRETIKNLY 315 + Sbjct: 283 AELFHTELLEYV 294 >UniRef50_Q39JP1 Transcriptional regulator, LysR family n=11 Tax=Proteobacteria RepID=Q39JP1_BURS3 Length = 300 Score = 197 bits (501), Expect = 6e-49, Method: Composition-based stats. Identities = 52/317 (16%), Positives = 101/317 (31%), Gaps = 27/317 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L L +E +AA+R+ + A+S + L LF + + Sbjct: 1 MELKQLRAFVTLAEELHFGRAAQRLFIVQPALSMQIKALEEELGARLFERDRHKVELSDT 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNALSKQIYQRYPQA 126 +Q + + +A S ++ ++L A+ + + +RYP Sbjct: 61 GRVFLPEARATLQQAARAEQMARLSSRGEIGTLRIAFVSSVLPVLLPAVLRTMRERYPLI 120 Query: 127 TIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 T++L++ D + A+ +D G L + ID V+ + V L Sbjct: 121 TLELKDLPTPDQIAALRDRRIDFGMIR----------LPAAYAGIDTRVVLEEGFVVALP 170 Query: 186 KDHPALH-QTWNLDTFLRYP-HIS-ICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 DHP + P + + + L G IA EF L Sbjct: 171 LDHPLAAHDAISPAALRGQPAFVLARRYAPGFHDDMLLALSRAGTTLEIAQEFGEFTTML 230 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 + A + L ++A PL + L W + +P Sbjct: 231 ALVAAGMGIGLIP-----AEAASALPPNVLARPLDLAGHRTG-----IGLAW--TDLDSP 278 Query: 303 KIVWLRETIKNLYASMA 319 ++ + A+ + Sbjct: 279 LKRAFVAALEQVTAASS 295 >UniRef50_B2JSK1 Transcriptional regulator, LysR family n=1 Tax=Burkholderia phymatum STM815 RepID=B2JSK1_BURP8 Length = 299 Score = 197 bits (501), Expect = 6e-49, Method: Composition-based stats. Identities = 38/299 (12%), Positives = 82/299 (27%), Gaps = 27/299 (9%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L L L + +AA+R++++ +S+ +A L LF + + T Sbjct: 1 MELRHLHYLVTLGETLHFGRAAERLHISQPPLSRQIALLEEELGVGLFDRTSRTVKLTAA 60 Query: 68 MVSMEQNLAEWMQMSNLL-LDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 Q+ E + + L + A+ + YP+ Sbjct: 61 GEGFLQDAKEILASVERAKRNAISANLGHRGSLSLGFMFAAAFSIAPAILRAYTTEYPEV 120 Query: 127 TIKL-RNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + + + + +D+G ++ +F + L Sbjct: 121 HLHVGEAVPSLLIQDLRESRLDVGLMYPPGEMA----------GMETLTVFEEPLVAALP 170 Query: 186 KDHPALH--QTWNLDTFLRYPHISICWEQS--DTWALDNVLQELGRERTIAMSLPEFEQS 241 +HP + + E S + N + G + Sbjct: 171 LNHPLSGSDDPIDAVDLKDEQFLITRREASPYFHDTIINHCKTEGFVPKTFLETNYQHTL 230 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 + L +A R Q + + L + V W+ RN + Sbjct: 231 ITFV--GQGLGVALVHRSMQT-SLPTNVKFRPL--------RNPPTVKLNATWNSRNRN 278 >UniRef50_B1Y0L4 Transcriptional regulator, LysR family n=2 Tax=Burkholderiales RepID=B1Y0L4_LEPCP Length = 298 Score = 197 bits (501), Expect = 6e-49, Method: Composition-based stats. Identities = 39/310 (12%), Positives = 89/310 (28%), Gaps = 21/310 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +DL L + + + + +A +R++ T A++ S+ +L PLF + G+ T Sbjct: 1 MDLRDLRYFETIAELEHIGRATERLHRTQPALTSSVRRLEEAVGAPLFEKAGRGIRLTQA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQT-PRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + + + +L ++Q+ P+ Sbjct: 61 GKVLLKWAQRVRFDVEDARREIGDIDRGLSGHIRIGIVPTAAQFILPPAARQLMSVAPEV 120 Query: 127 TIKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 T++ D+L + GE+D+ + + L D V Sbjct: 121 TLRTVVGLIDTLKPLLHAGELDLMVATESPPEA----------GFTSQRLAEDPIVVAAS 170 Query: 186 KDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGR-ERTIAMSLPEFEQSLFM 244 HP L ++ + LD+ + + + Sbjct: 171 ATHPIFANPPTLRDLTKFRWVLQPPGAPTRDWLDHTFDRKRLPRPQVQVESTMLLMLPAL 230 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 A+ LL + + + L V L ++ + + + + P Sbjct: 231 IAET-GLLSFISRHHLGPFESRSPLKEVPL-------KETTMHRRLVVTYRETRYLLPAA 282 Query: 305 VWLRETIKNL 314 L + Sbjct: 283 RLLISFLGEA 292 >UniRef50_A8ZUD0 Transcriptional regulator, LysR family n=1 Tax=Desulfococcus oleovorans Hxd3 RepID=A8ZUD0_DESOH Length = 298 Score = 197 bits (501), Expect = 6e-49, Method: Composition-based stats. Identities = 49/312 (15%), Positives = 97/312 (31%), Gaps = 24/312 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +DL L +++ RS ++AA + ++ VS + L F L ++PTP Sbjct: 1 MDLWRLRVFCKVVELRSFSRAAAGVRLSQPTVSSHVKDLEDHFGCRLIDRLGRSVAPTPA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + ++ + + + + R + + + +L L + YPQ Sbjct: 61 GELLYRQASDLLARYDGIEAEMAGYQGRVAGRLVIGGSTIPAGHILPGLIGAYRRAYPQV 120 Query: 127 TIK-LRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 T+ L I G+ ++ G + I + +D V + Sbjct: 121 TVCLLVGDTEKVFFDILSGKAELAVVGG----------RTADRRIVQQPFLTDEMRVVVP 170 Query: 186 KDHPALHQ-TWNLDTFLRYPHISICWEQSDTWALDNVLQE--LGRE-RTIAMSLPEFEQS 241 HP + T + + P I AL+ L G E + L E Sbjct: 171 ASHPWAGRKTVAVADLAKEPFIVRERGSGTRSALEESLAARGAGIEGLNVVAELGSTEAV 230 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 + + ++ + + L + KL F L + + S + Sbjct: 231 VQGIKS--GIGVSVLSSMAVAADVRAGM------LKALALRGVKLTRVFYLAFLRDRSQS 282 Query: 302 PKIVWLRETIKN 313 P I Sbjct: 283 PAANAFCTLIAA 294 >UniRef50_C3JGQ8 LysR-family transcriptional regulator n=2 Tax=Rhodococcus erythropolis RepID=C3JGQ8_RHOER Length = 307 Score = 197 bits (501), Expect = 6e-49, Method: Composition-based stats. Identities = 51/313 (16%), Positives = 95/313 (30%), Gaps = 22/313 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 LDL L L + +E SVT AA + ++S L +L + PLF + GL T Sbjct: 2 LDLIRLRVLVAVAREGSVTAAADSLGYAQPSISHHLRQLESEVGVPLFQRAGRGLRLTDA 61 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTP-RGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + E + + + + R + LAA + ++ +YP Sbjct: 62 GAVLVRRATEILGHVDAAVAEVQTYAGLRTGRLRLAAFPSALASLIPQAMAAFTSQYPDV 121 Query: 127 TIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 +I L + +L + +VD+ L + L D + Sbjct: 122 SISLVDAEPPKALALLRNNDVDVAVVFAHEDTPEVGL-----KHVAQTTLLEDPLYLITS 176 Query: 186 KDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMA 245 + + I+ C S L G I ++ + Sbjct: 177 ARNADAANEIT--DYAGETWIAGCP--SCRAHLLTACNRAGFIPRIEFETDDYVAVQALV 232 Query: 246 AQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIV 305 A ++T P +Q + +P ++ + + P I Sbjct: 233 AS--GSGVSTLPALALQAHQNPSIRAHRIP---------GERRTVSVATYGKPPLAPAID 281 Query: 306 WLRETIKNLYASM 318 T+ + SM Sbjct: 282 AFVRTLTAISESM 294 >UniRef50_C1DL37 LysR family transcriptional regulator protein n=2 Tax=Proteobacteria RepID=C1DL37_AZOVD Length = 312 Score = 197 bits (501), Expect = 6e-49, Method: Composition-based stats. Identities = 48/320 (15%), Positives = 100/320 (31%), Gaps = 28/320 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L ++ +E+ T+AA R+N+ +S+ + L LF+ P G+ T Sbjct: 1 MELRHLRYFVMVAEEKHFTRAAARLNMQQPPLSQQIRALEEELGFALFLRHPKGVELTAG 60 Query: 68 MVSMEQNLAEWMQMSNL-LLDKPHHQTPRGLKFELAAESPLMMI-MLNALSKQIYQRYPQ 125 + + + + L S ++ + ++ R+P Sbjct: 61 GEAFLREAQDILARVAQGASKAARVAQGIEGMLALGFTSSATSHPLIPRIIREYRARFPG 120 Query: 126 ATIKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 I L + L +++T G +D+G P I++ L + + L Sbjct: 121 VEIALSEDNAQRLTESVTAGGIDLGVLRAPVAN---------PAGIEFHRLLVEDMLLTL 171 Query: 185 RKDHPAL-----HQTWNLDTFLRYPHISICWEQ--SDTWALDNVLQELGRERTIAMSLPE 237 DHP + L R I + L + G E IA + Sbjct: 172 PVDHPLATDAARREGVPLAALARERFILVRRPGAPGMYANLIAACRNAGFEPAIAFEVER 231 Query: 238 FEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKR 297 ++ + A ++ P + ++ + L V + Sbjct: 232 MLTNVSLVAA--GAGISVVPASMKDLHR-DNVAYCRLRGAKPRLVAPVTLVC------RG 282 Query: 298 NSHNPKIVWLRETIKNLYAS 317 + +P + + L A Sbjct: 283 FNQSPPLRNFIALARQLSAE 302 >UniRef50_C6HY10 Transcriptional regulator, LysR family n=1 Tax=Leptospirillum ferrodiazotrophum RepID=C6HY10_9BACT Length = 303 Score = 197 bits (501), Expect = 6e-49, Method: Composition-based stats. Identities = 44/270 (16%), Positives = 84/270 (31%), Gaps = 16/270 (5%) Query: 12 LLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSM 71 L + + +S T+A + + +T AVS + L LF + + T + Sbjct: 5 QLKVFLKVAEYQSFTQAGEVLFLTQPAVSLQVKSLEKDLKVSLFERTGKKILLTEAGRKL 64 Query: 72 EQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQIYQRYPQATIKL 130 +Q + + A + +L L Q + + T L Sbjct: 65 LPLARSIIQQMEEAREVVRPLEDMPQGHLRIGASMTIGTYLLPPLLAQFLRANSRITASL 124 Query: 131 -RNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHP 189 + L + E+D+G E + +++D + L D + +HP Sbjct: 125 AVANTHQILHDLKASEIDLGLIEGEPT-------RTQGISLDRKFLDHDRLVLIDSLNHP 177 Query: 190 AL--HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERT---IAMSLPEFEQSLFM 244 L +LD + P I ++ L E M++ E + Sbjct: 178 LLPSSGPVSLDALRKVPFIGREPGSGTRQVIERELLEKNLPPDSFETVMTVDNPEAIKEL 237 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVAL 274 A +A C ++ L VA+ Sbjct: 238 VA--LGSGVAFISSLCLRPHESGLLRTVAV 265 >UniRef50_A0LBV6 Transcriptional regulator, LysR family n=1 Tax=Magnetococcus sp. MC-1 RepID=A0LBV6_MAGSM Length = 324 Score = 197 bits (501), Expect = 6e-49, Method: Composition-based stats. Identities = 36/305 (11%), Positives = 89/305 (29%), Gaps = 21/305 (6%) Query: 7 TLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTP 66 ++LN L + + ++ + ++AAK +V+ ++S ++ L LF + T Sbjct: 6 KMNLNQLRYVMAVARQGTFSRAAKICHVSQPSLSVAVRNLEEELGVVLFERFKHEVRVTT 65 Query: 67 LMVSMEQNLAEWMQMSNLLLDKPH--HQTPRGLKFELAAESPLMMIMLNALSKQIYQRYP 124 + + + ++ + P L A + + + +++Q P Sbjct: 66 EGERILARIQQALEAVAQIELAARSEENDPLKGSLRLGAIFTIAPYLFPSFVPELHQWAP 125 Query: 125 QATIKLRN-WDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVW 183 Q T+ L + + + RGE+D + L+ + V Sbjct: 126 QLTLLLEENFTASLSEKLKRGELDAMVIALPYDEP----------GVVTTPLYDEPFVVG 175 Query: 184 LRKDHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIA------MSLP 236 + HP + + + + + + + A + Sbjct: 176 MPAGHPWAGRHDLSGNDLAGERLLLLGKGHCFRDQVLEICPACHYVVDTATGLHNIIEGS 235 Query: 237 EFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVAL-PLPFDESQQKKLEVPFTLLWH 295 E M A + + P + L + ++ L W Sbjct: 236 SLETIRHMVASGVGITVLPMSSITTMVCSSLNCPEQSRSALRYAYFKEPAPVRRIALAWR 295 Query: 296 KRNSH 300 + + Sbjct: 296 DSHPN 300 >UniRef50_A6D744 Putative transcriptional regulator n=1 Tax=Vibrio shilonii AK1 RepID=A6D744_9VIBR Length = 311 Score = 197 bits (501), Expect = 6e-49, Method: Composition-based stats. Identities = 76/313 (24%), Positives = 132/313 (42%), Gaps = 21/313 (6%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 LDLNLL ++L+QER+ K A+R+ VT A+S++L KLR DD LFV GL P Sbjct: 8 FQKLDLNLLKTFRVLLQERNARKTAERLFVTQPAISQALQKLRFHLDDELFVKVQGGLEP 67 Query: 65 TPLMVSMEQNLAEWMQMSNLLLDKPHHQTPR--GLKFELAAESPLMMIMLNALSKQIYQR 122 TP + +E+ +A ++ L++ +P ++A ++ + +L ++ ++ Sbjct: 68 TPFALQVEEKIAPYLDGLEASLEQLSDFSPSELEGTIKIALAPIVLSCLAGSLFTELRKQ 127 Query: 123 YPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCV 182 P+ ++L +W + + + GEV IG L S+ I L V Sbjct: 128 APKLNLELVSWTQQTPEQLRSGEVFIGIHYD---------LDSISKEIARTKLADLEGQV 178 Query: 183 WLRKDHPALHQTWNLDTFLRYPHISI--CWEQSDTWALDNVLQELGRERTIAMSLPEFEQ 240 ++R+DHP + ++ S+ + +L++LG E +A Sbjct: 179 YVRQDHPLKGEVITAHDAAQFEIASLISPGWNDNFSFAAQILEQLGYEPKVAFRSEVLMA 238 Query: 241 SLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 + + + D L P H L AL D K H +N H Sbjct: 239 IIDVVSATDIL----LPHS-NLLPNRHSSGLRALRFELDGRTYTK---SLYTYLHNKNRH 290 Query: 301 NPKIVWLRETIKN 313 +PK WL + ++ Sbjct: 291 SPKAQWLEKILRE 303 >UniRef50_Q0FX50 Transcriptional regulator, LysR family protein n=2 Tax=Rhodobacteraceae RepID=Q0FX50_9RHOB Length = 300 Score = 197 bits (501), Expect = 6e-49, Method: Composition-based stats. Identities = 64/315 (20%), Positives = 116/315 (36%), Gaps = 22/315 (6%) Query: 4 SITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLS 63 +++D L L+++ + S T AA+++NV SAVS ++AKLRA F DPLFV Sbjct: 7 DPSSIDFAALNLLRVVHELGSFTAAAEKLNVNQSAVSYTIAKLRACFHDPLFVREGGRQV 66 Query: 64 PTPLMVSMEQNLAEWMQMSNLLLD-KPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQR 122 T + + + M + +L +A ++++ AL I + Sbjct: 67 STDRCEEILARSLQMLGMLDEMLQPDAFEPGSATQNVTIACNYYERVLLIPALVSAIRRE 126 Query: 123 YPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCV 182 P T+K+ N D + E D+ + L+++ Sbjct: 127 APGMTVKVINALGDGHLRLLNREADVLIGP----------FARSESGFHSRRLYAEEYAC 176 Query: 183 WLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 + HP ++D++L H+ I + A L+ G + P Sbjct: 177 LMDAAHPLADTALDIDSYLCLNHVLIDYGGGWQSAYLRELEAAGHRIAPVVVAPSPAGLA 236 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 + + D L+AT PR + +L + P P +L+W + + Sbjct: 237 TLIIESD--LVATVPRRLGEW-NADRLKVADCPFP--------GRFDVSLVWAAHTNASA 285 Query: 303 KIVWLRETIKNLYAS 317 WLR+ I + Sbjct: 286 MHRWLRDLIWRVARR 300 >UniRef50_Q4KHB2 Transcriptional regulator, LysR family n=28 Tax=Proteobacteria RepID=Q4KHB2_PSEF5 Length = 308 Score = 197 bits (501), Expect = 6e-49, Method: Composition-based stats. Identities = 47/314 (14%), Positives = 94/314 (29%), Gaps = 21/314 (6%) Query: 7 TLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTP 66 L L + Q+ SV++AA ++++ SA S S+ +L LF + LS Sbjct: 2 RFTLRQLQVFVAVAQQESVSRAAGLLSLSQSAASTSITELERQSSCQLFDRAGKRLSLNA 61 Query: 67 LMVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 L + + + + D + ++ + A + + L Q +P++ Sbjct: 62 LGKQLLPQAVALLDQAKEIEDLLNGKSGF-GSLSVGATLTIGNYLATLLIGSFMQVHPES 120 Query: 127 TIKLR-NWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 +KL + + E+D+G + I+ + D V+ Sbjct: 121 QVKLHVQNTAHIVQQVAHYEIDLGLIEGD----------CSHPDIEVQTWVEDELVVFCA 170 Query: 186 KDHPALHQ-TWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 HP + ++ I D ++ I + L E Sbjct: 171 PQHPLAKRGHATMEELTHEAWILREQGSGTRLTFDQAMRHHRSALNIRLELEHTEAIKRA 230 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 L + R + P+ L F +WHK+ + Sbjct: 231 VES--GLGIGCISRLALRDAFRRGSLV---PVETPGLD---LARQFYFIWHKQKYQTSAM 282 Query: 305 VWLRETIKNLYASM 318 E + A + Sbjct: 283 REFLELCRAFTAGV 296 >UniRef50_C6NW00 Transcriptional regulator, LysR family n=1 Tax=Acidithiobacillus caldus ATCC 51756 RepID=C6NW00_9GAMM Length = 332 Score = 197 bits (501), Expect = 7e-49, Method: Composition-based stats. Identities = 43/310 (13%), Positives = 83/310 (26%), Gaps = 22/310 (7%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 + + L + RS TKAA + + VS + KL PLF + Sbjct: 18 LRQITFRQLQVFLAVSHHRSFTKAADALFLAQPTVSLQMKKLGEIVGLPLFEQIGKEIRL 77 Query: 65 TPLMVSMEQNLAEWMQMSNLLLDKPHHQTP-RGLKFELAAESPLMMIMLNALSKQIYQRY 123 T + E + L + + R + L + L Q++ Sbjct: 78 TDAGQDLYTACREIFAIVENLETQIADRKGIRRGRLRLGVV-TTAKYIAPELLAAFGQQF 136 Query: 124 PQATIKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCV 182 P + + D + I E D+ G+ + V Sbjct: 137 PGIQFSMTVSNRDEIIRRIQDSEDDLYVMGQVPTDEVAVEATPFAWN---------PLTV 187 Query: 183 WLRKDHPA--LHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQ 240 + + HP L + L P + A + E I M L E Sbjct: 188 MVPRGHPLTRLGRPVPLAAIAEAPFLIREPGSGTRHAYLRLFAEKDLRPNITMELSSNEA 247 Query: 241 SLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 A + + + + P+ +++ + + L++ + Sbjct: 248 IKHAIASGLGISILSIHSLALEGTEG--------PVEVLDAEGFPILRKWYLVYPRDRVL 299 Query: 301 NPKIVWLRET 310 + E Sbjct: 300 SLTAQKFMEF 309 >UniRef50_Q4K4U2 Transcriptional regulator, LysR family n=17 Tax=Pseudomonadaceae RepID=Q4K4U2_PSEF5 Length = 309 Score = 197 bits (501), Expect = 7e-49, Method: Composition-based stats. Identities = 43/313 (13%), Positives = 101/313 (32%), Gaps = 22/313 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +D L + +E V +AA+R++++ A+S+ + +L D LF S L PT Sbjct: 1 MDFKQLRYFVAVYEEGHVGRAAERLSISQPALSQQIRQLEQNLDVSLFERSSKRLLPTLA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNALSKQIYQRYPQA 126 ++ + + + + + + + ++ + +++ + P Sbjct: 61 AHTLYNHALPLLDGLQQAREALRNFKGQALRTLAIGVLQTVHTSLVPQMLERVRKAQPHL 120 Query: 127 TIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 +++ + + G +DIG S + L+ D + + Sbjct: 121 VVQIYELTGLEIERRLLNGSLDIGISYLPPRQP----------GLHGVPLYEDELTLVIP 170 Query: 186 KDHPALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 + HP + ++ P + + E L LGR + L L Sbjct: 171 EQHPLREFKKVSMSQAAELPMLLLGEEFQIRQIWQAQLANLGRRPQVQAELNNMAGILDS 230 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 L P Q + +L L + ++ + L+ + Sbjct: 231 LPHTR--LATVLPGRSQQQHGNKELLWKPL-------SEPRVPLKVGLVCRDLQRQQGTL 281 Query: 305 VWLRETIKNLYAS 317 LR +++ + Sbjct: 282 ELLRSLLEDSMNA 294 >UniRef50_A9B4C8 Transcriptional regulator, LysR family n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9B4C8_HERA2 Length = 302 Score = 196 bits (500), Expect = 7e-49, Method: Composition-based stats. Identities = 39/297 (13%), Positives = 90/297 (30%), Gaps = 22/297 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++++ LL + + ++AA+R V+ ++S+ + KL LF + T Sbjct: 1 MEIHQLLYFVAVAETGGFSRAAQRCAVSQPSLSQQIIKLEHELGQALFERLGRTIRLTTA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHH-QTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 ++ + + + + + L +S+ +P+ Sbjct: 61 GQALLPQAQQLLTQWRSIKQHVSDSVEQHACRLAIGIIPTLAPRFFPNVSQAFQHHFPRT 120 Query: 127 TIKLRN-WDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 T+ + L + +D+ + I E LF +V V L Sbjct: 121 TLSIVEHTTSQLLIQLIEYSLDLLIASGPIEHPL----------IQIEPLFDEVLLVALP 170 Query: 186 KDHPALHQTW-NLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 DH ++ L+ P +++ + + +D E E + + Sbjct: 171 HDHQYAQRSVLQLNDLYHMPLLALHDDHCLSQQVDAFCYEQYLEPQVVGRVTNLTTIQRC 230 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 A L +A P+ + L + + WH + + Sbjct: 231 VAA--GLGMAFVPQSLTQAEPHPNVVYRRL-------LDAQPQRKIIAAWHHQRPPS 278 >UniRef50_B4STD8 Transcriptional regulator, LysR family n=6 Tax=Gammaproteobacteria RepID=B4STD8_STRM5 Length = 295 Score = 196 bits (500), Expect = 7e-49, Method: Composition-based stats. Identities = 51/313 (16%), Positives = 93/313 (29%), Gaps = 25/313 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L L +E + T+AA+R +V SA+S +A L PLF P + T Sbjct: 1 MNLKQLEFAVALAEEGNFTRAAERCHVVQSALSHQIANLEQELGTPLFERLPRQVRATAA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + + + L + + S L I + A+ Q +PQ Sbjct: 61 GEVLLVHARQVLASLRHLRADVAAVSGEVRGLLAIGQISSLTDIDVVAMLAAFQQAHPQV 120 Query: 127 TIKLR-NWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 +LR + D + + E+D+ G + +++L + L Sbjct: 121 EFQLRVDKSEDLIAQVQSRELDVALVGLAPSAGL--------DGVCHQMLQEEDLVAVLA 172 Query: 186 KDHPALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 H L + D+ G T+ + E Sbjct: 173 PSHRLAGHTRLPLAALQDEALVDFPRGTGARRQTDDAFAAAGLPHTVRFEVNLMELIERF 232 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 L + P Q +V +PL Q L+W + P Sbjct: 233 VRH--GLAVGIVPALIADGFQG----VVQIPL------QPTPTRRVHLVW--QRLPTPAA 278 Query: 305 VWLRETIKNLYAS 317 + + + Sbjct: 279 RAFVAAVLSRAGA 291 >UniRef50_C6CYK3 Transcriptional regulator, LysR family n=3 Tax=Bacillales RepID=C6CYK3_PAESJ Length = 296 Score = 196 bits (500), Expect = 7e-49, Method: Composition-based stats. Identities = 40/313 (12%), Positives = 92/313 (29%), Gaps = 24/313 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +D+ L + +E +T+AAK +N+ +S+ L + LF S GL+ T Sbjct: 1 MDIRQLRYFLAIAKEGQITRAAKALNMEQPPLSRQLKLMEDELGVILFDRSGKGLTLTHA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQT-PRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + +Q N + + + + + +L +Q + YP Sbjct: 61 GELLRDKAEKLLQEFNETMHEVKELDAGLHGMLAIGSVVS-CISLLPPPIEQFRRLYPNV 119 Query: 127 TIKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 T K+ D+ L + + + ++++ + L SD L Sbjct: 120 TFKIWEGDHFILGNLLEKRDIELIVARLPFESTLHT------QPYSVLPLPSDPYVAVLP 173 Query: 186 KDHPALHQ--TWNLDTFLRYPHISICWEQ--SDTWALDNVLQELGRERTIAMSLPEFEQS 241 T + P +++ ++ + + G E + Sbjct: 174 ASWVKGPDKNTMLMSELADMPFLTLKTDKTIGMHHRVMIEARAHGFEPKVICECSSVAII 233 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALP-LPFDESQQKKLEVPFTLLWHKRNSH 300 + + A + P+ LP + + ++W K Sbjct: 234 VALVAA--GIGATVFPKSVMAS--------FPLPTIKMLTISDADFQSEVGIIWLKDRYL 283 Query: 301 NPKIVWLRETIKN 313 + + Sbjct: 284 SKSARNFIRLFEE 296 >UniRef50_Q3S4D5 LysR-like regular protein n=1 Tax=Polaromonas naphthalenivorans CJ2 RepID=Q3S4D5_POLNA Length = 301 Score = 196 bits (500), Expect = 7e-49, Method: Composition-based stats. Identities = 56/242 (23%), Positives = 95/242 (39%), Gaps = 13/242 (5%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 + +DLNLL+ L+ +RSV+ +A+++ +T AVS +L +LRA D LF+ + G+ Sbjct: 1 MDLREIDLNLLVVFNQLLLDRSVSTSAEKLGLTQPAVSNALKRLRAVLKDELFLRTSRGM 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTP--RGLKFELAAESPLMMIMLNALSKQIY 120 PTP + + + + + + P F LA M + L + Sbjct: 61 EPTPYALHLAEPVIYALNALQTAFTTRNSFDPLASTRTFNLAMTDIGEMYFVPPLMNALS 120 Query: 121 QRYPQATIK-LRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 + P I +R + + + G VD+ LL +L LF Sbjct: 121 EAAPHVRISTVRPNAGNLKEDMESGTVDLALG----------LLPNLQTGFFQRRLFLHK 170 Query: 180 PCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFE 239 RK HP L F H+ I + +D +L G +R + + +P F Sbjct: 171 YVCMFRKGHPLAKSPMTLKQFTELDHVGILAANTGHGEVDGLLDRAGIKRKMRLVVPHFI 230 Query: 240 QS 241 Sbjct: 231 AV 232 >UniRef50_Q1LM47 Transcriptional regulator, LysR family n=1 Tax=Cupriavidus metallidurans CH34 RepID=Q1LM47_RALME Length = 300 Score = 196 bits (500), Expect = 7e-49, Method: Composition-based stats. Identities = 46/309 (14%), Positives = 94/309 (30%), Gaps = 27/309 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L + + +AAK + + A+S+ + L A LF P G+ + Sbjct: 1 MELRHLRYFACVGEAEHFGRAAKLLKIAQPALSRQIQDLEAELGVALFDRLPRGVRLNAV 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHH-QTPRGLKFELAAESPLM-MIMLNALSKQIYQRYPQ 125 S + ++ N + + + + + +++P Sbjct: 61 GRSFLDDARRILREVNEAKLRVERIAAGQTGTLRVGFGETQAWHGAVPDSLRAFREQHPT 120 Query: 126 ATIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 ++L +DA++ G +D GF L+ P + + + Sbjct: 121 VELELHAMASSRQVDAVSSGNLDAGFIFS---------LTKPPSEFAHRKVARHKLVLAA 171 Query: 185 RKDHPALH-QTWNLDTFLRYPHISICWE--QSDTWALDNVLQELG-RERTIAMSLPEFEQ 240 KDHP + + L P I L G I + + Sbjct: 172 PKDHPIMSLDSVRLRELRDVPFIWFHRWVYPRFHDRLIRACLRDGALAPQIVQQVTDHAT 231 Query: 241 SLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 L + L +A + + L + +PF L+W K+N+ Sbjct: 232 MLSLV--SCRLGVAFVSE-ATRWQCPAGVALRPVD-------DLNFSLPFYLIW-KKNNS 280 Query: 301 NPKIVWLRE 309 + + E Sbjct: 281 STLLREFLE 289 >UniRef50_B0MW77 Putative uncharacterized protein n=1 Tax=Alistipes putredinis DSM 17216 RepID=B0MW77_9BACT Length = 297 Score = 196 bits (500), Expect = 7e-49, Method: Composition-based stats. Identities = 38/315 (12%), Positives = 93/315 (29%), Gaps = 24/315 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 + + L L + S + AA+ VT ++S + L L S + PT Sbjct: 1 MTIIQLEYLLAVANCGSFSLAAEHCFVTQPSLSMQIKSLEEELGVVLLDRSKKPVIPTEA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + E ++ + + + + L + +L+ + YP+ Sbjct: 61 GEVVLAEIRETLRAYDHIREAVAELKGETSGRLRLGVIPTIAPYLLHKFIPDFVRDYPKV 120 Query: 127 TIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 +++ D +DA+ R +D + I LF D +++ Sbjct: 121 ELEIAEMVTADIVDALRRDRIDAALVAG----------GTCGEGIQEHELFDDRFHLYVS 170 Query: 186 KDHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRER-TIAMSLPEFEQSLF 243 +++P +T ++ + + + + Q + + Sbjct: 171 RENPLFERTNVRIEDIDLKELVLLSPGHCMRDQIIELCQAKREVPSHYTFESGSLDTLMR 230 Query: 244 MAAQPDNLLLATAPRYCQYY-NQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 + + P Y H+ + L + + + + Sbjct: 231 IVDYTHC--VTIIPEMAVEYIPAEHRCQVKTL-------AKGATSRKIAVAVRRTYVKSS 281 Query: 303 KIVWLRETIKNLYAS 317 I L +TI + + Sbjct: 282 IIKALIDTILSKVSR 296 >UniRef50_UPI00004DBCAD UPI00004DBCAD related cluster n=2 Tax=Xenopus (Silurana) tropicalis RepID=UPI00004DBCAD Length = 312 Score = 196 bits (500), Expect = 8e-49, Method: Composition-based stats. Identities = 52/310 (16%), Positives = 92/310 (29%), Gaps = 22/310 (7%) Query: 7 TLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTP 66 L L L + S +AA R+ + A+S+ + + LF +S T Sbjct: 2 DLSLQQLEAFVQVAAAGSFRQAALRLGQSQPALSRFIRQAEQTLGARLFDRDTRHVSITD 61 Query: 67 LMVSMEQNLAEWMQMSNLLLDKPHHQ-TPRGLKFELAAESPLMMIMLNALSKQIYQRYPQ 125 + ++ + L + +AA + +L + + Q Sbjct: 62 AGKELLPIAQRVLRDFDDALGDFGEFMAGHSGRIVVAALPSTSIALLPQALAAFSRTHSQ 121 Query: 126 ATIKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 T L + L + G D G S R + + Y LF D + Sbjct: 122 VTFALTEAPAEVLLALVEEGRADFGISVRPAPR----------QRLQYRHLFDDPFVLVC 171 Query: 185 RKDHPA-LHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 R+D P ++ F P I S D V + P Sbjct: 172 RRDDPLAARESVPWSAFSTRPCIVAGSRSSIRPVTDAVFLRQRMPVHPVLEYPSVASCGA 231 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 + A + + P + + LVALPL Q+ + P ++ S +P Sbjct: 232 LVAA--GVGITALPMLALELLNM--VELVALPL-----QRPLMSRPIGIVTRIGRSLSPV 282 Query: 304 IVWLRETIKN 313 ++ Sbjct: 283 SKAFMASLTQ 292 >UniRef50_B7H3Y5 HTH-type transcriptional regulator alsR (Als operon regulatoryprotein) n=12 Tax=Acinetobacter RepID=B7H3Y5_ACIB3 Length = 300 Score = 196 bits (500), Expect = 8e-49, Method: Composition-based stats. Identities = 51/317 (16%), Positives = 110/317 (34%), Gaps = 25/317 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 LDL L ++++ER++T AA R+ + +++ L KL L + P G+ PT Sbjct: 2 LDLYKLHAFVVVVEERNITHAANRLFIQQPPLTRLLKKLEQELGTQLLIRQPRGIEPTEA 61 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMI-MLNALSKQIYQRYPQ 125 +++ + ++ + + + + + S + +++ + + + YP Sbjct: 62 GLALFKEAQLLLEHARHIPKLVQDVSQGKTGQLNIGFTSSAGLHPLISLVLRSYREMYPA 121 Query: 126 ATIKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 KL LD + ++DI F S + + + + + V L Sbjct: 122 VQTKLEEAGSQKQLDWLISEKLDIAFLRAPI---------SRDIGLKHLHILDEPMVVAL 172 Query: 185 RKDHPALH-QTWNLDTFLRYPHISI--CWEQSDTWALDNVLQELGRERTIAMSLPEFEQS 241 HP + +L + Q + + G I P + Sbjct: 173 PIGHPLTQKKKISLSNLSEENFVLYRRSSGQGLYDNILYSCYQAGFSPRIIQEAPRPTAT 232 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 L + A + ++ P + +V KL P L+ + N ++ Sbjct: 233 LNLVAA--GIGISIVPASMHNFWDHE---IVYREFD----DSIKLNAPIYLITRE-NENS 282 Query: 302 PKIVWLRETIKNLYASM 318 K+ E ++ L +M Sbjct: 283 AKVSNFIELMQKLLPTM 299 >UniRef50_Q0K3Z3 Transcriptional regulator, LysR-family n=1 Tax=Ralstonia eutropha H16 RepID=Q0K3Z3_RALEH Length = 297 Score = 196 bits (500), Expect = 8e-49, Method: Composition-based stats. Identities = 50/312 (16%), Positives = 106/312 (33%), Gaps = 21/312 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 + + L L L + R+V++ A R+N+T A+S+ LA+L + LF GL PT Sbjct: 1 MRIRQLHVLVALHETRNVSRTAARLNMTQPALSRWLAELESELGVALFERHSRGLVPTRF 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHH-QTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 ++ + + + + A + + +L + + +R+P A Sbjct: 61 CEALVVHARTILNEIERTQATIRVMAEGAAGQLAIGATPTVSVDLLPSAISRFRERFPDA 120 Query: 127 TIKLRNWD-YDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + L D L A+ G +D E + + ++L+ + V Sbjct: 121 HLTLAEGTVEDMLPALREGRLDFVMGRTEVQG--------IDGELRCDLLYPETIRVIAG 172 Query: 186 KDHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELG-RERTIAMSLPEFEQSLF 243 HP + Y + LD L G + + ++ Sbjct: 173 PTHPLARKRKVGWADTRAYTWVGPPVTSQIRRELDYELALAGEPAPCVRIESATLLANVS 232 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 + Q + L + + R ++++L Q+ ++ LP + +L + P Sbjct: 233 LLQQGELLAV-MSGRMAAFFSRLGQVAILRLPYRREGM--------VGVLRRRDTEQTPL 283 Query: 304 IVWLRETIKNLY 315 + + Sbjct: 284 RQAFMDALAASA 295 >UniRef50_B2HU56 Transcriptional regulator n=17 Tax=Acinetobacter RepID=B2HU56_ACIBC Length = 295 Score = 196 bits (500), Expect = 8e-49, Method: Composition-based stats. Identities = 54/310 (17%), Positives = 102/310 (32%), Gaps = 22/310 (7%) Query: 7 TLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTP 66 + L L + QE +VTKA+ + +T SA S +LA L PLF L Sbjct: 2 RMTLRQLAVFVAVAQEGTVTKASDAVRLTQSAASMALADLEDGLGAPLFDRLGKRLQLND 61 Query: 67 LMVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 L + E + ++ + + + A + ++ L QR+PQA Sbjct: 62 LGRFLLPQALEILGRCE-AFEQAAKGELQSIDLRIGATLTISDYLMPDLMANFLQRHPQA 120 Query: 127 TIKL-RNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 ++L ++A+ + ++D+ H + D V Sbjct: 121 HLQLQVGNTRQMIEAVNQFQLDLALIEGSCHLPQ----------LQCIHWRDDELAVCCS 170 Query: 186 KDHPALH--QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 DHP + F I DN + + + I ++L E L Sbjct: 171 PDHPLTRLNRPLTPQDFHDVEWILREEGSGTREVFDNAILQDLPDANIRLTLGHNEAILK 230 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 + A + + + ++ QL ++ P +L P +L H++ P Sbjct: 231 IVAGGLGMS-CISKLAIEPLSEKGQLVILDTPF-------WQLTRPLYMLVHRQKYQGPG 282 Query: 304 IVWLRETIKN 313 + + Sbjct: 283 LKAFLKFCDE 292 >UniRef50_C6D237 Transcriptional regulator, LysR family n=2 Tax=Bacillales RepID=C6D237_PAESJ Length = 296 Score = 196 bits (500), Expect = 8e-49, Method: Composition-based stats. Identities = 46/312 (14%), Positives = 102/312 (32%), Gaps = 31/312 (9%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L + + + +TKAA+ + + A+SK++++L PLF + + Sbjct: 1 MELLQLHYFRTVAKYEHMTKAAEVLRIAQPALSKTISRLEEDVGVPLFDRNNRQIRLNRF 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHH-QTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + Q + + + + LA + L++ + + P+ Sbjct: 61 GRAFLQQVEIALGALDEGRRELADMMGTEQGTIRLATP---TLNRLSSTISEFRKENPEI 117 Query: 127 TIKLRN----WDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCV 182 ++ D + + RG+VD+ F + I +++ C+ Sbjct: 118 IFRVTQIPPASSSDMIGLLERGDVDLCFIAAPLNQS----------WIKEQIILKAEVCL 167 Query: 183 WLRKDHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQS 241 + HP T L +I + + G R I + E Sbjct: 168 AVPITHPLASKDTITLIETANEAYIEYHAGHPFRQINEAYCEAAGISRNIICEVDEPSAL 227 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 + L +A PR + + L + Q E F++ W+++ + Sbjct: 228 WSLVQA--GLGVAFVPRNTNEHPHVKLLNI----------QSPVCEREFSIAWNEKRYLS 275 Query: 302 PKIVWLRETIKN 313 E +K+ Sbjct: 276 RASRQYLEFLKS 287 >UniRef50_A0LJJ0 Transcriptional regulator, LysR family n=2 Tax=Bacteria RepID=A0LJJ0_SYNFM Length = 308 Score = 196 bits (500), Expect = 9e-49, Method: Composition-based stats. Identities = 46/314 (14%), Positives = 107/314 (34%), Gaps = 19/314 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L +++ S KAA +++ S++S + L LF + T Sbjct: 1 MELRQLKTFRVVANLLSFNKAAGQLHYAQSSISAQIQILEEELGVQLFDRLGKRVQLTEA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQAT 127 V + Q + + + + + + L + L A+ ++ + R+P+ Sbjct: 61 GVRLLQYANKILDLVDETNSMVNRVNEPTGSLTIRIPETLGVRRLPAVLREFHSRFPRVR 120 Query: 128 IKLRNWDYDSLD-AITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRK 186 + + LD + +G D+ F ES + +D L + + Sbjct: 121 LNFITCALEGLDKDLRKGITDLAFLLAESINAA---------DLDMATLGFEPVVLVAAP 171 Query: 187 DHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMA 245 DHP + + + + S L+ +L++ R E Sbjct: 172 DHPLAAKRKVHTRDLTGSTILLSRVDCSYRKVLEQILEQEEVTRFNRFEFSSVEVIKHCV 231 Query: 246 AQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIV 305 + ++ P + + +V LP + ++V ++W++ +P + Sbjct: 232 MA--GVGISVLPSIAVA-EDVARKRMVVLP-----WSEGGIQVAVLMVWYRERWISPTLQ 283 Query: 306 WLRETIKNLYASMA 319 + K ++A A Sbjct: 284 AFMDVTKKVFAQAA 297 >UniRef50_C5ALH3 Transcriptional regulator, LysR family protein n=1 Tax=Burkholderia glumae BGR1 RepID=C5ALH3_BURGB Length = 302 Score = 196 bits (500), Expect = 9e-49, Method: Composition-based stats. Identities = 46/255 (18%), Positives = 90/255 (35%), Gaps = 16/255 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L + +E + T+AA+R ++ SA+S S+ L L V + +S + Sbjct: 1 MELRQLRHFVAVAEEANFTRAAERCHIVQSALSTSIRLLEEELGARLLVRTTRRVSLSAA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTP-RGLKFELAAESPLMMIM-LNALSKQIYQRYPQ 125 + + + + + T R K + L + L AL + Y +P Sbjct: 61 GAVFLDSARRALDILDRAGLEVADITSVRRGKLSIGTVQSLPQFLELPALLSRFYHAHPG 120 Query: 126 ATIKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 ++L L + + E+D+ + + V+ D + Sbjct: 121 VEVRLVQGGAAELNEKVDARELDLAILP----------IEERNERLASHVIACDEMVLAC 170 Query: 185 RKDHPALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 R+DHP L + + Q +D E G +R +A + + + L Sbjct: 171 RRDHPLAASGQVPLSRLTKQAFVDFVPGQGTRRLVDRGFAEAGLQRRVAFEIGDLDTLLE 230 Query: 244 MAAQPDNLLLATAPR 258 + Q L +A P Sbjct: 231 LVRQ--GLGVALLPE 243 >UniRef50_A1SFE6 Transcriptional regulator, LysR family n=3 Tax=Actinomycetales RepID=A1SFE6_NOCSJ Length = 305 Score = 196 bits (500), Expect = 9e-49, Method: Composition-based stats. Identities = 39/318 (12%), Positives = 95/318 (29%), Gaps = 27/318 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L + L +ER +AA R++V A+S+ + +L LF + + T Sbjct: 1 MELRHVRYALALAEERHFGRAAARVHVAQPALSQQVKQLERELGVELFRRTTRRVELTEA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQT-PRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 ++ + + + R + + +L ++ ++++ P Sbjct: 61 GRRFAEHARGILAGVDRAREDLALLASGRAGRVSVGFVGTATYDVLPRVAHEVHRALPDV 120 Query: 127 TIKLR--NWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 ++LR + L + D+ + + L ++ + Sbjct: 121 DLQLRGESLSPRLLAGLADHTFDLALLRPDPLGGD---------GLVVRTLRAEPLVAVV 171 Query: 185 RKDHPALH-QTWNLDTFLRYPHISIC--WEQSDTWALDNVLQELGRERTIAMSLPEFEQS 241 HP + +L + S + + G T + + E Sbjct: 172 PTGHPLAGQRRIDLAELAGESFVVHPSAHRSSIHERVLQACADAGFVPTSLLEVAETATM 231 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 + A + L P + + L P + L +R+ + Sbjct: 232 VVFVAAGLGVALVPEPVRSLGLEGVSYVGLTDPP-----------TIDLALA-GRRDESS 279 Query: 302 PKIVWLRETIKNLYASMA 319 P + + I+ + A Sbjct: 280 PAVRNVAVIIERIVTGAA 297 >UniRef50_Q1LGR3 Transcriptional regulator, LysR family n=3 Tax=Burkholderiales RepID=Q1LGR3_RALME Length = 304 Score = 196 bits (499), Expect = 9e-49, Method: Composition-based stats. Identities = 43/309 (13%), Positives = 92/309 (29%), Gaps = 27/309 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +DL L L +E +AA R+ +T +S ++AKL A L + ++ T Sbjct: 1 MDLRQLRYFVALAEELHFGRAAARLAITQPPLSFNIAKLEASLGVQLLQRTTREVALTAA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + + + ++ + + ++ L + +P Sbjct: 61 GKEIYKEALKILALTANARELAGRAARGEIGAVHVGFVGSAVLTPLGERIRAFGAIHPDV 120 Query: 127 TIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + L + + +DA+ +DIG +P I L + L Sbjct: 121 DVVLHELNSFEQIDALQARHIDIGII----------HPRVIPNGIASHSLHGEHFICLLP 170 Query: 186 KDHPALHQT-WNLDTFLRYPHISICWEQS--DTWALDNVLQELGRERTIAMSLPEFEQSL 242 DHP ++ + S + + +G I + Sbjct: 171 ADHPLARDRTIDVRELRHDDFVLFPRHFSPEFHDQIVALCASVGFTPNIRHQVRHMLTIA 230 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALP-LPFDESQQKKLEVPFTLLWHKRNSHN 301 + A+ ++ PR + +V LP L ++ +W + Sbjct: 231 TLVAK--RFGVSIVPRS---------VDVVTLPNLACRPLGKQATPSELVGIWRDDEQGS 279 Query: 302 PKIVWLRET 310 + L Sbjct: 280 AVLSMLHAL 288 >UniRef50_A6X5N5 Transcriptional regulator, LysR family n=37 Tax=Brucellaceae RepID=A6X5N5_OCHA4 Length = 301 Score = 196 bits (499), Expect = 9e-49, Method: Composition-based stats. Identities = 37/314 (11%), Positives = 92/314 (29%), Gaps = 26/314 (8%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 + + + L L++ S ++AA+ + +T S +S ++ L L S + Sbjct: 1 MLNISVRQLHYFMALVKAGSFSRAAEVVGITQSTLSAAIQALETELGVTLIDRSGRRMQL 60 Query: 65 TPLMVSMEQNLAEWMQMSNLLLDKPHHQ-TPRGLKFELAAESPLMMIMLNALSKQIYQRY 123 P + + L + P + + + +L + + + Sbjct: 61 LPAGEDFLARARTIIALIEELPEHARQAERPLTTRLRMGVIPSIAPFLLPKVLPATAKAF 120 Query: 124 PQATIKLRN-WDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCV 182 P+ + +R LD++ G +D+ + L D+ + Sbjct: 121 PELQLTIREGLTRSLLDSLRSGSLDVALVAHPYDLD----------EFEIAELGRDIFYL 170 Query: 183 WLRKDHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIA---MSLPEF 238 +R+DH + D P + + ++V+ +G A + Sbjct: 171 AVRRDHALANRDQIDADDLQGQPFLLLETGHCLR---EHVMAAIGSTPAQASGDVHATSI 227 Query: 239 EQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRN 298 + + + + P L +P K L+W Sbjct: 228 MTLVQLV--DFGMGVTLLPEVAVKAGATRGTELSIVPYE-----GKNNYRSLVLVWRSNA 280 Query: 299 SHNPKIVWLRETIK 312 + + + ++ Sbjct: 281 ARRNEFQLFADHLR 294 >UniRef50_Q3IKZ1 Putative transcriptional regulator of the LysR family n=3 Tax=Alteromonadales RepID=Q3IKZ1_PSEHT Length = 315 Score = 196 bits (499), Expect = 9e-49, Method: Composition-based stats. Identities = 64/332 (19%), Positives = 132/332 (39%), Gaps = 34/332 (10%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 +I +DLNLL+ L +L+ E+SV+KAA ++ +T A+S +L +LR FDDPL V + + Sbjct: 1 MNIRNVDLNLLVYLNVLIDEKSVSKAANKLALTQPAMSNALKRLRDLFDDPLLVRASGSM 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGL--KFELAAESPLMMIMLNALSKQIY 120 +PT ++++ + ++M+ + P F + A L ++ + Sbjct: 61 APTAKALALKPEIELLLKMAEEITQPTELFDPTSAKVTFRIMANDYLESTLIAPFITEQL 120 Query: 121 QRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 + P + + +L + +G +D+ + + LP + ++ D Sbjct: 121 SKNPGINFDILSPSDVNLQDMEKGTIDLAINR----------FNGLPRSFHQATVWRDNY 170 Query: 181 CVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDT-------------WALDNVLQELGR 227 C ++ L Q+ +L+ +L+ HI + +D L +L + Sbjct: 171 CCLTHPNNQFLQQS-SLEDYLKSEHIWVNRAGWGPEPAVTNKSGKQKLGWVDEALWQLEQ 229 Query: 228 ERTIAMSLPEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLE 287 R I + + + Q D L+ R + L + +P + + Sbjct: 230 TRKIRVFTRHY-MIASLLCQSDKLIATLPRRQAKLLTTHTNLVISPVPF-------QIVP 281 Query: 288 VPFTLLWHKRNSHNPKIVWLRETIKNLYASMA 319 + ++W H WLR + ++A Sbjct: 282 IEVKMIWSPLLHHASAHQWLRRELLEFAKTIA 313 >UniRef50_C9NTB9 LysR-like transcriptional regulator n=5 Tax=Vibrionales RepID=C9NTB9_9VIBR Length = 314 Score = 196 bits (499), Expect = 9e-49, Method: Composition-based stats. Identities = 69/321 (21%), Positives = 126/321 (39%), Gaps = 23/321 (7%) Query: 1 MKKSI--TTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNS 58 M +I +DLNLLL L + RSV+ AAK +++ A S +L +LR DDPLF Sbjct: 1 MSDNINWRRVDLNLLLTFDALYKHRSVSAAAKHLHLGQPATSYNLKRLRELLDDPLFERG 60 Query: 59 PLGLSPTPLMVSMEQNLAEWMQMSNL--LLDKPHHQTPRGLKFELAAESPLMMIMLNALS 116 ++PT + +E + + + + + + F++ + L Sbjct: 61 GSSMTPTTRAMEIEPKVRQILSIFSQDIMPKAAFEADSFDGTFKIGLSDYAEQVYGPELF 120 Query: 117 KQIYQRYPQATIKLRNWD-YDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVL 175 ++ Q P A + + D + ++A+ + EVD+ + S LP + L Sbjct: 121 DKLQQLAPNAKVLFKPVDVSNCVEALEKQEVDLCIG----------VFSDLPPKVTSTFL 170 Query: 176 FSDVPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSL 235 + + +L+T+L P + I Q T +D L +G +R + + Sbjct: 171 YREKHLCIFDNRVLGSELPLSLETYLATPQMIITASQELTTKVDATLSSMGVKRNVVLGS 230 Query: 236 PEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWH 295 F M LL A + L L P+ + ++ Sbjct: 231 TRFLTIRRML-TGRRLLAVMAEMVGRVELIDDNLTLCPPPINIP-------DFDIEMVTL 282 Query: 296 KRNSHNPKIVWLRETIKNLYA 316 R+SH+P+I+WL + +K + Sbjct: 283 TRDSHHPRILWLSDWVKEVIQ 303 >UniRef50_A4YQI9 Transcriptional regulator of protochatechuate degradation (LysR family) n=14 Tax=Proteobacteria RepID=A4YQI9_BRASO Length = 316 Score = 196 bits (499), Expect = 1e-48, Method: Composition-based stats. Identities = 36/279 (12%), Positives = 85/279 (30%), Gaps = 15/279 (5%) Query: 6 TTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPT 65 ++++L L + + S +KAA ++V A+S+ + L + LF + G+ T Sbjct: 16 SSMNLKQLEYFVQVAELGSFSKAASVLDVAQPALSRQVRALESELKQQLFARNGRGVELT 75 Query: 66 PLMVSMEQNLAEWMQMSNLLLDKP-HHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYP 124 + + +Q+ + + + + + + L + + YP Sbjct: 76 EAGKRLLDHSVGVLQLVAHAREDLGASRDAPVGRVTIGLPPSIARQLTLPLIDRFRKEYP 135 Query: 125 QATIKLRN-WDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVW 183 A + + ++ +T G +D+G I+ + + + Sbjct: 136 AARLAVVEGLSTHVVEWVTTGRIDVGMVYNPEAQA----------GIEITPVLQEPLALV 185 Query: 184 --LRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQS 241 K + + RY I + L+ G IA + Sbjct: 186 SHAPKGKRRVTAPLPMTELSRYSLIMPERVHAMRRLLETQAALAGIRLDIAWEVSSVPSI 245 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDE 280 + + + T + +L + L P Sbjct: 246 IDLVCAGYGHAVLTPSGVAAS-GRASELTIRPLTEPAPT 283 >UniRef50_B6B1G4 LysR family transcriptional regulatory protein n=1 Tax=Rhodobacterales bacterium HTCC2083 RepID=B6B1G4_9RHOB Length = 326 Score = 196 bits (499), Expect = 1e-48, Method: Composition-based stats. Identities = 47/317 (14%), Positives = 108/317 (34%), Gaps = 28/317 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +DL L + +E AA+R+ + +A+S + L + LF + +S T Sbjct: 1 MDLRQLRAFVAVAEELHFRTAAERLGMAQAAISTKIKDLESELGFKLFFRTTRHVSLTQA 60 Query: 68 MVSMEQNLAEWMQMSNL-LLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 +++ + + + R + + ++ L + + ++P Sbjct: 61 GAVFLESVRDTLNTLENGVAAASAAADNRLDRLRIGGIDGALIWYLPPILRDFTAKFPSV 120 Query: 127 TIKLRNWDY--DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 + + D +D++ +DI F ++ +E+L + V L Sbjct: 121 SPTMTESSSSEDQIDSLESHHIDIAFFRPP----------TMRPGFKFELLLQERIYVAL 170 Query: 185 RKDHPALHQ--TWNLDTFLRYPHISIC--WEQSDTWALDNVLQELGRERTIAMSLPEFEQ 240 ++H + ++ P IS + N + G I M + + Sbjct: 171 PRNHRLATRTGPVSIKELADDPVISYPIHARPHLNRLIVNGFAKAGVRPKIIMEVIDKFT 230 Query: 241 SLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 +L + A+ + +A P + L +P ++ L + F + W + N Sbjct: 231 TLQLVAR--GIGVAFVPEWI--------GALYLPNMPLRPLAEEDLTLQFGVAWRE-NDR 279 Query: 301 NPKIVWLRETIKNLYAS 317 N + ++ AS Sbjct: 280 NETLREFLIPVREHAAS 296 >UniRef50_B4E7M9 LysR family regulatory protein n=1 Tax=Burkholderia cenocepacia J2315 RepID=B4E7M9_BURCJ Length = 299 Score = 196 bits (499), Expect = 1e-48, Method: Composition-based stats. Identities = 75/316 (23%), Positives = 129/316 (40%), Gaps = 26/316 (8%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVN--SPLGL 62 + D+ LL+ L +L++E +VT+AA+R+ ++ A+S LA+LR DDPL V G+ Sbjct: 1 MKKHDMGLLVSLDVLLEEANVTRAARRLAISQPALSAQLARLRQVLDDPLLVPAERGRGM 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQIY 120 TP ++ L E + L++ P+ P F +A M + L + I Sbjct: 61 RLTPRAAQLKSPLHELLTRLEDLVEAPYAFDPSTAKRDFTIALNDNAAMTIGLDLIECIR 120 Query: 121 QR-YPQATIKLRNWDYDSLDAIT-RGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSD 178 ++ Y + + D + + RG +D+ R + +P + L D Sbjct: 121 KQSYAGIRLAMLQIPRDEVLDLAARGRIDLVIGTR----------AFMPPGLRTHDLVYD 170 Query: 179 VPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEF 238 V RK HP L+ + Y H+ + S +D+ L ELG R +S+ + Sbjct: 171 RFQVAQRKGHPRGTAAMTLEQYCAYEHVLVSTNGSYHSGIDDFLAELGHYRHTTVSVQYY 230 Query: 239 EQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRN 298 + + + L R+ + H + LP FD Q + WH R Sbjct: 231 TAVPPILERTNCLA-TLPERFLHRF--DHMIDRFDLPFAFDPFQLQVG-------WHPRF 280 Query: 299 SHNPKIVWLRETIKNL 314 + WLRE + + Sbjct: 281 DEDLGHQWLREQLIAV 296 >UniRef50_C0CW97 Putative uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0CW97_9CLOT Length = 300 Score = 196 bits (499), Expect = 1e-48, Method: Composition-based stats. Identities = 43/317 (13%), Positives = 108/317 (34%), Gaps = 34/317 (10%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 + L + + E S +KAA +++V+ A+S+ + +L LFV ++ TP Sbjct: 1 MQLRDIHYVLAAADEGSFSKAAVKVHVSQPALSQLIQRLEDELGVKLFVRKSNRVTLTPA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 ++ + +S+ L+ K + + ++ L + + +R+ Sbjct: 61 GKIFYEDGKVILALSDQLIHKMNDFQSLKKGELTISVSPFYQKCYLLGVLSEFQKRHFGI 120 Query: 127 TIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 +++ + DS + +G+VD+ F +L +I YE +F + + + Sbjct: 121 KVRIVDAFSSDSETLLVQGQVDLAFV----------MLPYQNKSIKYERVFEERIFLAVP 170 Query: 186 KDHPALH-------QTWNLDT---FLRYPHISICWEQSDTWALDNVLQELGRERTIAMSL 235 + + ++ P + + + + + G E +A Sbjct: 171 RQFAINRKLPDPEERPCTIEDLKVLKDEPFVMYEHGRRMWGSSIALCRSAGFEPRVAFES 230 Query: 236 PEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWH 295 E M A + + P + + + + T+ + Sbjct: 231 NVCESLNAMVAG--GMGVGFVPSAIDRVKARYDSVI------YYPIDDENAVRTLTIGYM 282 Query: 296 KRNSHNPKIVWLRETIK 312 ++N + RE ++ Sbjct: 283 EKNMTSAA----REFVR 295 >UniRef50_Q1DBZ6 Transcriptional regulator, LysR family n=1 Tax=Myxococcus xanthus DK 1622 RepID=Q1DBZ6_MYXXD Length = 311 Score = 196 bits (499), Expect = 1e-48, Method: Composition-based stats. Identities = 38/311 (12%), Positives = 90/311 (28%), Gaps = 24/311 (7%) Query: 12 LLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSM 71 L + + + AA+ + ++ S +S+ L L A L V +P G T Sbjct: 5 QLRAFLEVARAGRLATAARGLGLSQSGLSRQLQSLEAALGTRLLVRTPGGTVLTDAGERF 64 Query: 72 EQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQIYQRYPQATIKL 130 + + + + L + +L + +++P+ +L Sbjct: 65 LPHAQRALDALTAGTSELERLSGTPHGVVSLGTLHTVGAYLLPDIIPAFARQFPEVRPRL 124 Query: 131 RN-WDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHP 189 + + RG +D+ + + L+ + + + + H Sbjct: 125 SEGLAPAMEEGVARGALDLAILSLPVRRA----------DLVAQRLWEESLVLAVPRGHR 174 Query: 190 A--LHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQ 247 + +D + P + I + + G +A+ E M + Sbjct: 175 LTKSGKPVTMDEAVEEPWVVIPGMSGTRAM-EAACEARGVTPRLAVETDNAEAMRRMVER 233 Query: 248 PDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWL 307 L +A P+ + +V L + ++ L+ L Sbjct: 234 --GLGVAMVPQLMARDHHAQGFDVVPL-------ARAGVKRQVALIHRGEGYLTAAARAL 284 Query: 308 RETIKNLYASM 318 + I +M Sbjct: 285 KSFIVESVRAM 295 >UniRef50_A8FC55 LysR family transcriptional regulator n=2 Tax=Bacillus pumilus RepID=A8FC55_BACP2 Length = 298 Score = 196 bits (499), Expect = 1e-48, Method: Composition-based stats. Identities = 42/312 (13%), Positives = 96/312 (30%), Gaps = 21/312 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +D + + TKAA+++ ++ +S+ + L A PLF + T Sbjct: 1 MDTRHITYFMAVFDHLHFTKAAEQLGISQPTLSQQIRLLEAEVGMPLFDRIGKKVVATEA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHH-QTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + Q + +Q + + + LA + L L + YP+ Sbjct: 61 GSLLYQYGMKMLQAERDAKNAMKELLSEKRGNVRLAVLPSDLDFQLVPLFVEFKTLYPET 120 Query: 127 TIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRK 186 +K + + + +VD+G R + L S+ ++ Sbjct: 121 NLKAYS-TIFVREEVLSHKVDLGIGLRGP----------ADKRLIQIPLGSEPYELFAHS 169 Query: 187 DHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMA 245 + ++ L+ + + +++V +E G E M + L + Sbjct: 170 ESELAQKSEVTLEELTEHALVMYPKGYLGRDLVEDVCKEQGVELDTVMEVGSASSLLQLV 229 Query: 246 AQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIV 305 + PR +V++P+ L ++ + Sbjct: 230 EA--GIGATIQPRGLLQQQATWP-NIVSIPIADPAPV-----RHLELTYYTDRFVSKAQQ 281 Query: 306 WLRETIKNLYAS 317 L E + + + S Sbjct: 282 QLSEWLIDFFKS 293 >UniRef50_C4K9T0 Transcriptional regulator, LysR family n=1 Tax=Thauera sp. MZ1T RepID=C4K9T0_THASP Length = 309 Score = 196 bits (499), Expect = 1e-48, Method: Composition-based stats. Identities = 42/273 (15%), Positives = 88/273 (32%), Gaps = 14/273 (5%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L + +E + T+AA R+++ +S + L LF P ++ + Sbjct: 2 MELRHLRYFIAVAEELNFTRAATRLHIGQPPLSMQIRDLEEEIGVRLFERGPRRVALSTA 61 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPL-MMIMLNALSKQIYQRYPQ 125 + + + + + + S L +L +R+PQ Sbjct: 62 GERFLLHARRILDGVEEAVAEARRAARGELGELRVGFTSSLPFTDLLPDALNAYRRRFPQ 121 Query: 126 ATIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 ++LR + A+ GE+D+GF ++ P I + + + + Sbjct: 122 VRLQLREMFTPEQFQALVSGELDVGFVRLQAGTP--------PAGIVLREVARNPLRLVV 173 Query: 185 RKDHPALH-QTWNLDTFLRYPHISICW--EQSDTWALDNVLQELGRERTIAMSLPEFEQS 241 H +L IS L + ++ G E I + E Sbjct: 174 NAAHRLAGAAQVHLAELAGEDFISFPADVGTDLPGVLRALCRQAGFEPRIVQTAREATTQ 233 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVAL 274 + + A + + AP ++ L L Sbjct: 234 IGLVAAGLGVAVLPAPLESVRIARVRYLALAEP 266 >UniRef50_B1LYW9 Transcriptional regulator, LysR family n=10 Tax=Rhizobiales RepID=B1LYW9_METRJ Length = 333 Score = 196 bits (499), Expect = 1e-48, Method: Composition-based stats. Identities = 83/319 (26%), Positives = 136/319 (42%), Gaps = 21/319 (6%) Query: 2 KKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLG 61 ++ +DLNLL+ L L+ ERSVT+AA R+ + SA+S SLA+LR FDD L +P G Sbjct: 26 HIDLSRIDLNLLVALDALLDERSVTRAAARVGIGQSAMSSSLARLRRLFDDELLTRAPDG 85 Query: 62 LSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQI 119 + PTP + + + L ++ L+ + P F ++ + ++ L Q+ Sbjct: 86 MRPTPRALRIAEPLRSTLRQVQALVHREEQFDPATVARTFTVSLPDSVEALLGPRLIAQL 145 Query: 120 YQRYPQATIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSD 178 + P + LR+ D LD + VD+ +L+ D Sbjct: 146 RRDAPGIRLLLRSVDRTRILDELDADRVDLAIGLFSEGQL----------HHKQRLLYRD 195 Query: 179 VPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEF 238 V L LD +LR+PH+ ++ +D+ L +GR RT+A++ P F Sbjct: 196 SYVVLFNAALIGLEPPIGLDDYLRFPHVLTSLRETAHGVVDDALALIGRSRTLAVTTPRF 255 Query: 239 EQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRN 298 FM + R + L + +P+P D +V ++LWH Sbjct: 256 LVVPFMVRAAPVIA-TMHARLATSFASALALSVSPVPVPLD-------DVSVSMLWHASY 307 Query: 299 SHNPKIVWLRETIKNLYAS 317 H+P WLRE + L Sbjct: 308 DHDPAHRWLRELLVRLAHE 326 >UniRef50_B8IW67 Transcriptional regulator, LysR family n=1 Tax=Methylobacterium nodulans ORS 2060 RepID=B8IW67_METNO Length = 316 Score = 196 bits (499), Expect = 1e-48, Method: Composition-based stats. Identities = 38/316 (12%), Positives = 96/316 (30%), Gaps = 22/316 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +D L +++ S++KA++ + V A+S+ LAKL PL S G++PT Sbjct: 1 MDFRQLRYFAQIVESGSLSKASRNLYVAQPALSQQLAKLEDEVGKPLLHRSTRGVTPTEN 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 +++ + ++ + L ++ + + + ++ + L ++I +YP Sbjct: 61 GLALYHHARFMLRQLDQALSIARQESGQIEGMVSIGLPATTVLAIGTPLVRRIRTKYPGI 120 Query: 127 TIKLRN-WDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + + I ++D+ + VL + V L Sbjct: 121 MLNVVEGMSGHLTHMIRLCQLDLAILFNSDVAS----------DLPSTVLLDEELFVILP 170 Query: 186 KDHPAL---HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 + P + + + P I + +E + + + Sbjct: 171 SNSPLVPHDRTSITIAEAAALPLILPTGTHGLRRRISAEFEERNLTAHVVAEIDSLSLVM 230 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 D + P + AL + ++ + +P Sbjct: 231 SCV--YDGIGATIKPISSLQLGGKRRKEWRALSISDARLSRRNYLYSINA-----DLLSP 283 Query: 303 KIVWLRETIKNLYASM 318 + ++ + Sbjct: 284 AASVVANEVRETARHL 299 >UniRef50_B2T7R4 Transcriptional regulator, LysR family n=5 Tax=Burkholderia RepID=B2T7R4_BURPP Length = 325 Score = 196 bits (499), Expect = 1e-48, Method: Composition-based stats. Identities = 55/317 (17%), Positives = 105/317 (33%), Gaps = 18/317 (5%) Query: 6 TTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPT 65 L LL L + +E +V +AA + +T A S+ L +L + LF +P G+ T Sbjct: 12 ARLKTRQLLLLAAMEEEGNVRRAADVLGMTQPAASRLLKELEDMLEVSLFDRTPHGMHAT 71 Query: 66 PLMVSMEQNLAEWMQMSNLLLDKPHHQT-PRGLKFELAAESPLMMIMLNALSKQIYQRYP 124 M ++ + + D+ + + + M+ + +RYP Sbjct: 72 LYGEVMIRHARMVLSNLSHAHDEISALRSGLAGQVRIGVIAAAAATMVPRAIASVKERYP 131 Query: 125 QATIKLRNWDYDS-LDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVW 183 Q I D L + GE+DI + + YE L + CV Sbjct: 132 QLQIWAEVETSDVMLPRLAEGELDIMIGRVLERQNQFKT------EVRYEPLADEPLCVV 185 Query: 184 LRKDHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGR-ERTIAMSLPEFEQS 241 R H ++T L + + D + ++G ++ F Sbjct: 186 ARPGHHLENETGLTLRGIVNASWVLHPPGSVLRHRFDLMFSQIGLNPPQNVVNTNNFLAI 245 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 + Q D L + + Y Q L + + LP F ++ + + + Sbjct: 246 SSLLLQSDMLAV-LPDEVARQYQQYGVLKRIPIDLPCRMD-------TFGIITRQSHLLS 297 Query: 302 PKIVWLRETIKNLYASM 318 P + E ++ + Sbjct: 298 PAASVVLEALREAAGEV 314 >UniRef50_Q15VE5 Transcriptional regulator, LysR family n=1 Tax=Pseudoalteromonas atlantica T6c RepID=Q15VE5_PSEA6 Length = 297 Score = 196 bits (499), Expect = 1e-48, Method: Composition-based stats. Identities = 39/271 (14%), Positives = 89/271 (32%), Gaps = 15/271 (5%) Query: 7 TLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTP 66 + L + Q + +AA+++ ++ A+S ++ K+ LF + + +P Sbjct: 2 NVSYRQLQAFIQVAQSATFAEAAQKMFLSQPALSSAIKKMEEQVGGGLFSRTTRKVQLSP 61 Query: 67 LMVSMEQNLAEWMQMSNLLLDKPHH-QTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQ 125 M + K +AA + L A+ ++P Sbjct: 62 EGQDFLPVAIRLMNDWQDAFGDLQQVFSMGRGKLSIAAMPSFAVGHLPAILGAFQSQFPN 121 Query: 126 ATIKLRN-WDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 + + + ++A++ V +GF+ + + +F+D L Sbjct: 122 VKVAVADIVMEQVINAVSEERVALGFTFETEQLD----------GLLFHPMFTDEFIAVL 171 Query: 185 RKDHPALHQ-TWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 K HP Q + + + P I++ + +DN + L + + + Sbjct: 172 PKLHPLSQQSSVTWNALAQSPFIAMNRGSAIRRWVDNHYEALELKVNMVAEASQLATLGQ 231 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVAL 274 L ++ P CQ Q L + + Sbjct: 232 FVEH--GLGVSIVPGLCQQQMQRLGLRCLPI 260 >UniRef50_D1CCM2 Transcriptional regulator, LysR family n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=D1CCM2_THET1 Length = 310 Score = 196 bits (499), Expect = 1e-48, Method: Composition-based stats. Identities = 43/315 (13%), Positives = 95/315 (30%), Gaps = 23/315 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++LN L L L+ S T AA++++++ AVS+ + L P+ + PT Sbjct: 1 MNLNQLRVLVALINRGSYTAAAEQLHLSQPAVSQQIKALETACGVPVVERVDGKIVPTYA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQ-TPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + + + +F + A + M + L + +P+ Sbjct: 61 GEVLYRYAQSMLHIEEEAQHALAGIKAGVKGRFVVGANTTGGMYITPPLIAAYRKNHPET 120 Query: 127 TIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRK 186 I R +SL A + + E + D + Sbjct: 121 EIIFRIEGTESLLA---------ALANRLLDLAIVGGPVTDKKLKAEPILPDRVVLITSP 171 Query: 187 DHPA-LHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMA 245 HP Q I + + +++ L+ G IAM + E Sbjct: 172 HHPLSSRQQIRAQDLANERFIIARYGSTTRRLIESRLRHKGVNLHIAMEMAGTEDIKKAV 231 Query: 246 AQPDNLLLATAPRYCQYYNQLH--QLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 + + + + H Q+ +V L + + ++ + + P Sbjct: 232 EAGLGVAMVSQWSVLREVAAGHLRQIEIVDLDI----------RRDYVMVTNPARYYTPA 281 Query: 304 IVWLRETIKNLYASM 318 + ++ + Sbjct: 282 AEDFMDFVRQYAPQL 296 >UniRef50_A6GE91 Probable transcription regulator protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GE91_9DELT Length = 305 Score = 196 bits (499), Expect = 1e-48, Method: Composition-based stats. Identities = 66/317 (20%), Positives = 122/317 (38%), Gaps = 21/317 (6%) Query: 4 SITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLS 63 I LDLNLL L+ L+ RSV++AA+ I V+ A+S +L +LRA D L + + Sbjct: 3 DIDALDLNLLKSLRALLDTRSVSRAAEAIGVSQPAMSAALRRLRAALGDELLLRQGHQMI 62 Query: 64 PTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQIYQ 121 PT S+ + L + + + L + + ++ ++ L + + Sbjct: 63 PTAYAESLVEPLTDALGQLEVALFQRAGFDASSWATTLFILTTDDVIEVLGGPLHDALAE 122 Query: 122 RYPQATIKLRNWDYDSLD-AITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 P T+ R D + RG+ + + + P + L+ D Sbjct: 123 LAPGVTLAFRTLTSDYGKGQLQRGDAHLAITVD----------WTAPPELKRVRLYDDRF 172 Query: 181 CVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQ 240 +R DH + + F R H+ + +D+ L + G R I +P F Sbjct: 173 VSLVRADHRFARRRPSRAAFARAEHLLVAPLGGTWGPVDDALADDGLGRAIRAVVPTFSS 232 Query: 241 SLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 + + + L+ + + +H L L P+ + + L WH R Sbjct: 233 APGYLVRSE-LVCTLPRHFARAVAGVHGLKLFETPVAL-------APLRYDLFWHPRFDR 284 Query: 301 NPKIVWLRETIKNLYAS 317 +P VWLR ++ + + Sbjct: 285 DPGHVWLRGLLREVADA 301 >UniRef50_B3EA60 Transcriptional regulator, LysR family n=2 Tax=Bacteria RepID=B3EA60_GEOLS Length = 302 Score = 195 bits (498), Expect = 1e-48, Method: Composition-based stats. Identities = 57/311 (18%), Positives = 104/311 (33%), Gaps = 25/311 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L + QE S ++AA+++ V A+S +A L PL + + + T Sbjct: 1 MELRHLRYFVNVAQELSFSRAAEKLLVAQPALSTQIADLEQEIGTPLLLRNTRSVQLTAA 60 Query: 68 MVSME-QNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + A + + + S M+ L L ++ YP Sbjct: 61 GKVFLIEAQAILAAADAAKDRALRTSRGQEGQLSIGFFSAPTMLFLPDLIRRYRAIYPNV 120 Query: 127 TIKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 I++ D L A +RGE+DIGF+ L + EVLF + + Sbjct: 121 AIRMHELTPDRQLAAFSRGEIDIGFTRP---------LPPGYPDLAGEVLFQEHFLAVMA 171 Query: 186 KDHPA-LHQTWNLDTFLRYPHISICW--EQSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 + HP Q+ +L+ + P + + + + G ++ S L Sbjct: 172 ETHPLGSRQSIHLNELAQEPFVLLDRAVAVGLHDHIIAACLKAGFSPLVSTSPDLMSAVL 231 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 M A ++ P Q L F +P + WH + P Sbjct: 232 TMVAAEQG--VSIVPEGVQNLRSNQ--------LAFVPIIPALEPIPLIVCWHAKTDAPP 281 Query: 303 KIVWLRETIKN 313 + + I+ Sbjct: 282 R-DAFLQLIRE 291 >UniRef50_B6R352 Transcriptional regulator, LysR family n=1 Tax=Pseudovibrio sp. JE062 RepID=B6R352_9RHOB Length = 303 Score = 195 bits (498), Expect = 1e-48, Method: Composition-based stats. Identities = 72/319 (22%), Positives = 128/319 (40%), Gaps = 25/319 (7%) Query: 2 KKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLG 61 K + +LD L+ L+L+ + SVT+AA+ + V S VS L ++R DPLFV + Sbjct: 3 KMNYLSLDGRALMMLKLIHETGSVTQAAQMMGVNQSTVSHGLERVRGLLGDPLFVKAGRN 62 Query: 62 LSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGLK--FELAAESPLMMIMLNALSKQI 119 + PT M ++ + E +Q L+ +P P F + +++ ++ +++ Sbjct: 63 VVPTERMDALMPMVEELLQTL-ALIGEPSSFDPSTATNRFVIDCRDEDHNLLIPSVIRRL 121 Query: 120 YQRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 + P T++ R + ++ GE D+ F+ + LF D Sbjct: 122 RKEAPNVTLRCRLSHRHEVASLVDGEADLLFTPLPPPDS---------HEFVAQTLFDDE 172 Query: 180 PCVWLRKDHPALHQTW-NLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEF 238 V+ P L+ ++ PH ++ + +D L ELG +R S P F Sbjct: 173 FVVFYD---PITRDAPDTLEKYVAAPHANMLVTADEVTFIDRALAELGHKRQTVYSAPSF 229 Query: 239 EQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRN 298 D L+AT PR L P+P ++V +WH RN Sbjct: 230 NALAATLPGTD--LIATMPRKLICGGIKSGLASCNCPVPV-------VDVGINAIWHIRN 280 Query: 299 SHNPKIVWLRETIKNLYAS 317 +P W R+ + + + Sbjct: 281 RTSPAHKWFRDLVVSEAQA 299 >UniRef50_Q391B6 Transcriptional regulator, LysR family n=1 Tax=Burkholderia sp. 383 RepID=Q391B6_BURS3 Length = 300 Score = 195 bits (498), Expect = 1e-48, Method: Composition-based stats. Identities = 68/298 (22%), Positives = 122/298 (40%), Gaps = 20/298 (6%) Query: 21 QERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSMEQNLAEWMQ 80 E SV+ AA+ ++++PSA+S++LA+++ D + V + G+ T +++ L +Q Sbjct: 17 DEESVSGAARSLDLSPSAMSRTLARVQDAIGDKVLVRAGKGMVATETARRLKEPLDRILQ 76 Query: 81 MSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQATIKLRNWDYDSLDA 140 LLL H F ++A + + Q + +P A ++ ++ Sbjct: 77 DVELLLGAQHRSIDAQRVFNISANDGFIDSFAVPIIAQAHDAWPHARLRFLPKHEKTVAR 136 Query: 141 ITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPALHQTWNLDTF 200 + GEVDI ++ I LF D LRK H + LD + Sbjct: 137 LRSGEVDIEIG----------VVGETGPEIMIRKLFDDRMVGVLRKGHRLARRRMTLDAY 186 Query: 201 LRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQPDNLLLATAPRYC 260 L PHIS+ + +D+ L E GRER + +P F+ + +A + D + Sbjct: 187 LSVPHISVSRKGRFHGPIDDALSEQGRERNVIAVVPNFKSGIELAQRSDWIAHVPEKHTA 246 Query: 261 QYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWLRETIKNLYASM 318 Q H + LP+ +++WH R + LR+ I N+ + Sbjct: 247 QA---RHDVVTFDLPVATPALA-------ISIMWHPRFERDAVHAGLRDLIVNVCRQV 294 >UniRef50_A6UB72 Transcriptional regulator, LysR family n=1 Tax=Sinorhizobium medicae WSM419 RepID=A6UB72_SINMW Length = 326 Score = 195 bits (498), Expect = 1e-48, Method: Composition-based stats. Identities = 47/312 (15%), Positives = 113/312 (36%), Gaps = 19/312 (6%) Query: 12 LLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSM 71 LL ++ +E +VT AA+++ ++ A+++S+ +L LF G++PT ++ Sbjct: 23 LLRSFLMVAREGNVTAAAEKLGISQPALTRSIRRLEDETGFRLFDRHTRGVTPTIYGKAL 82 Query: 72 EQNLAEWMQMSNLLLDKPHHQT-PRGLKFELAAESPLMMIMLNALSKQIYQRYPQATIKL 130 ++ + + ++ +L +++ P+ + L Sbjct: 83 LRHAQLIDTECRFASSELEALRSGHRGQIKIGGGPFWGAALLPRAVARLHSLLPKLQVNL 142 Query: 131 RNWDYDSLD-AITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHP 189 + + L + GE+D+ S LS P + + + +++R+ HP Sbjct: 143 QIGVNNVLHPKLLDGELDLVVSAAPRD------LSQFPEHFRFTRITTIRSQMFVREGHP 196 Query: 190 -ALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGR-ERTIAMSLPEFEQSLFMAAQ 247 + + YP I + + +L++LG IA+ L + Sbjct: 197 ILAQERIRYEDLANYPWIMYQQDPEIIERVATLLKDLGVNPPRIAIKASSLMAVLELLRS 256 Query: 248 PDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWL 307 D L AP + + + +P+ ++ P + +H+ + L Sbjct: 257 GDFLACLAAP----ILGVVQDVGIRPVPID-----REIWSFPAGITYHRAIEQSTPFELL 307 Query: 308 RETIKNLYASMA 319 R+ + + + Sbjct: 308 RQMLTDEVTKLG 319 >UniRef50_C5B901 Transcriptional activator, LysR family n=74 Tax=Proteobacteria RepID=C5B901_EDWI9 Length = 360 Score = 195 bits (498), Expect = 1e-48, Method: Composition-based stats. Identities = 45/320 (14%), Positives = 102/320 (31%), Gaps = 27/320 (8%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 + + L + +M ++T+AA ++ + VS+ LA+ LF L P Sbjct: 50 MHRISLRQVAIFHAVMTSGNLTEAATQLRTSQPTVSRELARFEQLLALKLFDRVRGRLRP 109 Query: 65 TPLMVSMEQNLAEW---MQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQ 121 T + + + + ++ + ++ +L + ++ + Sbjct: 110 TAQGLQLFEEVQRAYCGLERIEDAASQIRQFRRA--TLDIVCLPAFSQSLLPQVCRRFLE 167 Query: 122 RYPQATIKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 YP+ ++ + + L + ++ D+G + S P + L + Sbjct: 168 CYPEVSLTITPQESPLLEEWLSAQRYDLGLTEE----------CSTPPGCERHALATLNE 217 Query: 181 CVWLRKDHPALHQTW-NLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFE 239 + DHP LH F P+IS+ S LD + Q G R + Sbjct: 218 VCVMPADHPLLHHAILTPAHFAAQPYISLSAGDSYRHTLDALFQRAGVARRMVAETHSAA 277 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 + Q + L+ L + +L+ + Sbjct: 278 AVCALVRQ--GIGLSIVNPLTALDFVGRGLAWRPFSVAVP--------FTVSLIRPRHRP 327 Query: 300 HNPKIVWLRETIKNLYASMA 319 + + L +++ A++A Sbjct: 328 GSAVVDALIVSLQEELAAVA 347 >UniRef50_A5ZQM8 Putative uncharacterized protein n=1 Tax=Ruminococcus obeum ATCC 29174 RepID=A5ZQM8_9FIRM Length = 313 Score = 195 bits (498), Expect = 1e-48, Method: Composition-based stats. Identities = 38/318 (11%), Positives = 101/318 (31%), Gaps = 24/318 (7%) Query: 1 MKKSITT---LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVN 57 MK + + L + S++ AA+ + ++ VS+++ +L ++ LF Sbjct: 1 MKNDWNRRGKMTIRHLNIFVAVADYGSMSAAARHLYLSQPTVSQAIRELEKHYNGLLFER 60 Query: 58 SPLGLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSK 117 L T + E ++ + + + L +L + + + L Sbjct: 61 LGKKLYLTERGELLLPRARELVRQFEETEELILN-QGQSLTLKLGSTITVGTCLTPRLIP 119 Query: 118 QIYQRYPQATIKLRNWDYDSLDA-ITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLF 176 ++ + P + + +++ + R E+D+G E + + + Sbjct: 120 ELQKSCPDVKVSSYVSNTRAIEQKLLRSELDVGIVEGEIYSP----------DLHVLPIV 169 Query: 177 SDVPCVWLRKDHPA-LHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSL 235 D + + K+HP L + ++ + ++ Sbjct: 170 DDRLVLAVGKEHPFYLKKVLHVQDLEQEQFAMREQGSGTRQLFEDYATRHQISFQTVWEA 229 Query: 236 PEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWH 295 L D +L + R + + + + +++ + F L++H Sbjct: 230 NSPGTLLNAVL-YDGVLSVMSLRLMYHEIRNDSIHVF-------QNENGEWNRKFKLVYH 281 Query: 296 KRNSHNPKIVWLRETIKN 313 K P + L + + Sbjct: 282 KNKFLTPAVHELERILHS 299 >UniRef50_UPI0001C42298 LysR family transcriptional regulator n=1 Tax=Bacillus pseudofirmus OF4 RepID=UPI0001C42298 Length = 291 Score = 195 bits (498), Expect = 1e-48, Method: Composition-based stats. Identities = 37/310 (11%), Positives = 92/310 (29%), Gaps = 26/310 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +D+ L ++ E +T AA+++N+ +S+S+ K+ L V L T Sbjct: 1 MDMRQLRYFVTVVDEGQITLAAQKLNMAQPPLSQSIKKMEHEIGAKLLVRHGRKLEVTEA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHH-QTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + + + L L + L + ++ YPQ Sbjct: 61 GEVLYSKGLQLLNTFDETLGAVRETGEGMRGTLSLGCVMTCIHQ-LPERVQTFHRLYPQV 119 Query: 127 TIKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 +K+ D L + + ++++ H ++ ++ + +D + Sbjct: 120 KLKILGGDPHQLSELVESRDIELAIVRSPLHYKNVNMI----------EIANDPFVFIVP 169 Query: 186 KDHPALH--QTWNLDTFLRYPHISICW--EQSDTWALDNVLQELGRERTIAMSLPEFEQS 241 K + + ++ YP I++ + + + G + P+ Sbjct: 170 KSWTDVSSLSSITMNQISEYPLIALHRVNGIGIYEIILDEFRRHGIKPKYICESPDATIL 229 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 L + + P + L + + ++W K + Sbjct: 230 LSIVKA--GIGAILLPESALFNFTSKDLATI-------KIDDFSATTQTCVIWQKDRYIS 280 Query: 302 PKIVWLRETI 311 E Sbjct: 281 KAARKFIELF 290 >UniRef50_Q7MCL9 Putative transcriptional regulator n=1 Tax=Vibrio vulnificus YJ016 RepID=Q7MCL9_VIBVY Length = 313 Score = 195 bits (498), Expect = 1e-48, Method: Composition-based stats. Identities = 64/320 (20%), Positives = 123/320 (38%), Gaps = 22/320 (6%) Query: 1 MKK-SITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSP 59 MK +DLNLL L++L +E++ AA+R+ V SAVSKSL KLR F D LF Sbjct: 1 MKDIDWHKIDLNLLKILRVLAEEQNTRLAAERLFVGQSAVSKSLGKLRELFGDELFTRER 60 Query: 60 LGLSPTPLMVSMEQNLAEWMQMSNLLL--DKPHHQTPRGLKFELAAESPLMMIMLNALSK 117 GLS TP +++ + + ++ LL + + +A ++ L Sbjct: 61 HGLSQTPFCIAIMPKVNQLLESFEQLLSNQETFEPATIDREICIAINPLFYRSVIPILYP 120 Query: 118 QIYQRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFS 177 ++ + P A + NW +D+ + G++D+G S+ + S++ A Sbjct: 121 RLRKEAPNAVFRFINWSWDAETKLLNGQIDVGVHFSPLDTSSQIVASNICPA-------- 172 Query: 178 DVPCVWLRKDHPALHQTWNLDTFLRYPH-ISICWEQSDT-WALDNVLQELGRERTIAMSL 235 + R+D P + + L P + + ++ + +L G E + Sbjct: 173 -DFKLCCRRDSPFAKKGYTLAQLAETPMTVLVMPSYANRLSIAEKMLVSAGLEGKVIARC 231 Query: 236 PEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWH 295 + + L + + D ++ + L +P L Sbjct: 232 DQLDMCLSIVSSGDAVMPVC---SLIKHMLPADLTFTEIPSEIRLPN-----FHIALHTS 283 Query: 296 KRNSHNPKIVWLRETIKNLY 315 + ++ WL + I+ + Sbjct: 284 HHSQYSAIGQWLAQRIREVI 303 >UniRef50_B6IYM5 RuBisCO operon transcriptional regulator n=1 Tax=Rhodospirillum centenum SW RepID=B6IYM5_RHOCS Length = 314 Score = 195 bits (498), Expect = 1e-48, Method: Composition-based stats. Identities = 47/314 (14%), Positives = 91/314 (28%), Gaps = 23/314 (7%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 SI + L + S + A++ +TP A+S + ++ PLF + Sbjct: 1 MSIRNATIRQLQIFAAAARTLSFARVAEQFRLTPGAISFQIKQIEGLCGFPLFERVGRSV 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNALSKQIYQ 121 T ++ + ++ N + L S ++ L + Sbjct: 61 VLTDAGAALLDHATVILKELNDADQQMEALRGSTGGSVTLGLVST-AKYIVPHLLSRFQA 119 Query: 122 RYPQATIKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 P TI L++ + A+ +G+VDI GR S ++ + Sbjct: 120 ERPGVTITLQDGNRRKIHAAVIKGDVDIAIMGRPSAEV-----------VESVAFANHPS 168 Query: 181 CVWLRKDHPALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFE 239 + HP L I +D + G IAM+ E Sbjct: 169 TIIAAPSHPLTRGGRLRLHDLENERFIVREEGSGTRALMDGFFRSQGLTPRIAMTTSSNE 228 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 + +A R+ L L L + L + ++ + Sbjct: 229 MIKQAVMA--GIGIALISRHTIQLELAIGL-LRELDIE-----GLPLMRAWYVVHRRSLP 280 Query: 300 HNPKIVWLRETIKN 313 P R+ ++ Sbjct: 281 LLPVHSQFRQFMQE 294 >UniRef50_A1WN33 Transcriptional regulator, LysR family n=1 Tax=Verminephrobacter eiseniae EF01-2 RepID=A1WN33_VEREI Length = 311 Score = 195 bits (498), Expect = 1e-48, Method: Composition-based stats. Identities = 44/304 (14%), Positives = 105/304 (34%), Gaps = 19/304 (6%) Query: 7 TLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTP 66 ++ + L + + S++ A + ++++ +A+++++ +L A LF G++ T Sbjct: 2 SISIRTLQYFNAVAETGSISAAMQTLDISQAAITEAIQRLEAHLGSMLFRRHARGMALTH 61 Query: 67 LMVSMEQNLAEWMQMSNLLLDKPH-HQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQ 125 ++ + + + + + A SPLM L L ++ + +P+ Sbjct: 62 AGHEFLRHSHLILNAVSSAENALAVRPDAMTGELSIGAVSPLMGYYLPGLLERFRRSFPR 121 Query: 126 ATIKLRNWDYDSLDAIT-RGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 T+++ +++ + GE+D+ + A L +WL Sbjct: 122 VTVRIIEESGSTIEHLIVNGEIDVALTLTSHLEN--------HHAFHTLQLVRSPWHLWL 173 Query: 185 RKDHPALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 H + + L I + ++ + D L+E I E Sbjct: 174 PTGHRLVGAKPVTLRELHNEAVIVLRNDELERTTGDLWLRES-VRPRIVAKTRSVEAVRS 232 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 + A + + P L L+A PL + + + L+W + + Sbjct: 233 LVATGNG--ICVLPEVLFRQWSSEGLRLIAQPL-----RNEPATLELGLIWRRGAKVSAA 285 Query: 304 IVWL 307 I Sbjct: 286 ISAF 289 >UniRef50_A9AT14 LysR family transcriptional regulator n=11 Tax=Burkholderia cepacia complex RepID=A9AT14_BURM1 Length = 300 Score = 195 bits (498), Expect = 1e-48, Method: Composition-based stats. Identities = 40/308 (12%), Positives = 101/308 (32%), Gaps = 19/308 (6%) Query: 13 LLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSME 72 L + + + +AA+++++T +S+ + KL LF + ++ T + Sbjct: 8 LEAFVAVAELGTFHRAAEKLHLTQPGLSRRIQKLEQALGVELFQRTTRSVTLTGVGRQFL 67 Query: 73 QNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNALSKQIYQRYPQATIKLR 131 E + ++L + K +++ ++ +L + Q ++YP +++ Sbjct: 68 PMAREQIAQLGMMLSSIQEIAEKRYGKVRVSSIPTVVAQLLPKVLLQYAEKYPLIGVQIL 127 Query: 132 NWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPA 190 + ++D L + G + G S + +E LF D + + +D P Sbjct: 128 DGNHDFVLSQVRAGIAEFGVSLHPGDDE----------DLLFEPLFPDRYVLAVHRDDPL 177 Query: 191 LH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQPD 249 L + + + L+ ++ + + + A Sbjct: 178 AQADGVTLAELRHARLVIGGRDSGNRLLLEMLMGQEAVRLRWFYEVEHISCVAALVAA-- 235 Query: 250 NLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWLRE 309 + A PR + L + + + ++ H+ S + L Sbjct: 236 GVGCAILPRSAVDGVGM----LASPDVRAVPITSPVISRTVGIVRHRAVSMSSMASDLCA 291 Query: 310 TIKNLYAS 317 +K A Sbjct: 292 LVKAAAAR 299 >UniRef50_C0CQV4 Putative uncharacterized protein n=1 Tax=Blautia hydrogenotrophica DSM 10507 RepID=C0CQV4_9FIRM Length = 311 Score = 195 bits (498), Expect = 1e-48, Method: Composition-based stats. Identities = 40/313 (12%), Positives = 101/313 (32%), Gaps = 22/313 (7%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 + + + L + ++++AAK++ +T +VS+++ +L + LF L Sbjct: 1 MEVKLMTIRHLRIFLAVADSGTMSQAAKKLYITQPSVSQAVRELEEHYRVLLFERLSKKL 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQR 122 T + + + + L + + + A + L + ++ Sbjct: 61 YITEAGKTFYSYAKQVVFQFDQLEEHM--FRDLKERLRIGATVTVGSRALPEIVREFRLE 118 Query: 123 YPQATIKLRNWDYDSLDA-ITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPC 181 +PQ + + +++ + E+D+G + R + + D Sbjct: 119 HPQTDVYCYGGNTQTIEEKLLAMELDVGIIEGKVQSRDLVAIPMID----------DYLV 168 Query: 182 VWLRKDHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQ 240 + KDHP + + + +N L++ G + Sbjct: 169 LVCGKDHPFMEREKLYPSDLKDQEFVMREKGSGTRALFENYLEKHGVRIKVVFEESSPAA 228 Query: 241 SLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 L L + + + + +L A ++++ F+ ++HK Sbjct: 229 ILRTVQINQCLAVLSV-GLIETEVKEGRLKAFA-------QEEQEWNRKFSFVYHKDKFL 280 Query: 301 NPKIVWLRETIKN 313 I L +KN Sbjct: 281 TVGIKELERIVKN 293 >UniRef50_A9BZQ9 Transcriptional regulator, LysR family n=1 Tax=Delftia acidovorans SPH-1 RepID=A9BZQ9_DELAS Length = 323 Score = 195 bits (498), Expect = 1e-48, Method: Composition-based stats. Identities = 71/312 (22%), Positives = 131/312 (41%), Gaps = 25/312 (8%) Query: 9 DLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLM 68 DLNLL+ L L+ SVT+AA R++++ A+S +LA++R F DP+ V + L PTP Sbjct: 6 DLNLLIALDALLSTGSVTQAAGRMHLSTPAMSHTLARIREAFGDPILVRAGRSLVPTPRA 65 Query: 69 VSMEQNLAEWMQMSNLLLDKPHH--QTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 +++ + + + + L D +F + A + ++ +LS+ + P A Sbjct: 66 LALAEPVRALLAQARALQDPVDAGGLAGLRRRFVVRAPEGIAVVFGASLSRALEAEMPLA 125 Query: 127 TIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRK 186 +++ + A+ G +D+ S+ + V+ +R Sbjct: 126 SLQFLPETHADPGALREGRIDLDVGS----------FRSMDPETESLVISEQTLVGVVRA 175 Query: 187 DHPALH-----QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQS 241 HP L Q + F H+ I ++ +D L+ LG +R +A+ +P + Sbjct: 176 GHPLLKSARKSQRPSAAQFAAARHVGITQRPGESSPVDAALEALGLQRQLALLVPSSFSA 235 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 L A++ D + R L + ALP+ P + WH R+ + Sbjct: 236 LIAASRTDLVA-CVPTRTAHGMAASLGLVVFALPIEVQVQ-------PMRMAWHPRHQAD 287 Query: 302 PKIVWLRETIKN 313 P WLR+ I+ Sbjct: 288 PAHQWLRDCIQR 299 >UniRef50_A9AMZ1 Transcriptional regulator, LysR family n=6 Tax=Proteobacteria RepID=A9AMZ1_BURM1 Length = 353 Score = 195 bits (498), Expect = 1e-48, Method: Composition-based stats. Identities = 67/304 (22%), Positives = 126/304 (41%), Gaps = 25/304 (8%) Query: 22 ERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSMEQNLAEWMQM 81 ERSVT AA+R+N++ SA S++LA+LRA D L + + L TP + + + + Sbjct: 52 ERSVTGAARRLNLSVSATSRTLARLRALTGDRLLLQAGRTLVLTPYAEQLSRRIPALARE 111 Query: 82 SNLLLDKP---HHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQATIKLRNWDYDSL 138 + +L + +F L A + ++ AL+ ++ + P ++ + Sbjct: 112 AESVLSRAAYRFDSATLAQRFTLCAGEGFVDLLGAALTNRVRRAAPGVQLRFVPKPDWNA 171 Query: 139 DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHP-ALHQTWNL 197 A+ G VD+ ++ + I VLF+D R HP ++ Sbjct: 172 QALREGLVDLEIG----------VVKTAAPEIRTRVLFTDRYVGLCRIGHPLLAAGEIDM 221 Query: 198 DTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQPDNLLLATAP 257 +L Y H++I +D L+ G R + + +P + ++ + D L + Sbjct: 222 QRWLAYDHVTISRTGEADNPIDARLESTGVPRNVPIVVPSYTGAMQLVRHSDLLAIVPHS 281 Query: 258 ----RYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWLRETIKN 313 + Y + + ALPLP + +WH R H+P WLR+ ++ Sbjct: 282 CLGNAFMPDYAAENGVQSFALPLPLPA-------FNISAIWHPRLDHDPAHRWLRDEVRA 334 Query: 314 LYAS 317 + A+ Sbjct: 335 VCAA 338 >UniRef50_A4XED3 Transcriptional regulator, LysR family n=1 Tax=Novosphingobium aromaticivorans DSM 12444 RepID=A4XED3_NOVAD Length = 333 Score = 195 bits (497), Expect = 1e-48, Method: Composition-based stats. Identities = 58/320 (18%), Positives = 122/320 (38%), Gaps = 21/320 (6%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 LDLNLL+ L L+ ERSV+ AA R+ ++ SA S +L +LR +F D L V + Sbjct: 1 MRFGRLDLNLLVALDALLTERSVSLAADRLCLSQSATSSALGRLREYFGDELLVVKGRNM 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNL--LLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIY 120 T + + + ++ + P + A ++L + Sbjct: 61 ILTARAEELIEPVRAVLEQIRTTVAVAPPFDPATTDRVIRIMASDYSTEVLLTDALATME 120 Query: 121 QRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 + P +++ ++AI RG +D+ + ++ ++LF D Sbjct: 121 RCAPSMRFEIQPMHDAPIEAIERGYIDLLLTIDY----------AISSDHPSQILFEDDY 170 Query: 181 CVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVL-QELGRERTIAMSLPEFE 239 V D+PA+ + + H+S + ++ A ++ + ++R + + P F Sbjct: 171 VVVGAADNPAMAEPMTRQLYFELGHVSARFGKARVPAFEDWFVRRQKQQRRVEVVAPSFL 230 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 + + R + + L + +P ++ L W+ N+ Sbjct: 231 SLPGLVVGTRRIA-TMHRRMAEIVVRNMPLVIREIPFDIPPIRE-------ALQWNIANN 282 Query: 300 HNPKIVWLRETIKNLYASMA 319 ++ + W+ E ++ S A Sbjct: 283 NDRALRWVVEQLELAATSKA 302 >UniRef50_A1SEI3 Transcriptional regulator, LysR family n=1 Tax=Nocardioides sp. JS614 RepID=A1SEI3_NOCSJ Length = 300 Score = 195 bits (497), Expect = 2e-48, Method: Composition-based stats. Identities = 69/320 (21%), Positives = 122/320 (38%), Gaps = 24/320 (7%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 ++T +DLNLL+ L L+ ERSVT+AA+R++V A+S +L +LR F D LFV + + Sbjct: 1 MNVTNVDLNLLVALDALLTERSVTRAAERLSVGQPAMSATLGRLRKLFGDQLFVRTGGDM 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQIY 120 PT + ++ + E ++ +LD P F + A + ++++ L +++ Sbjct: 61 VPTAMGQALVGPVTEAIRAVQAVLDVVDAFDPTTDRRTFTVMASDYVGLVLIRPLVRRLS 120 Query: 121 QRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 P+ + ++ D I +G VD+ E + + E LF D Sbjct: 121 VEAPEVRLIVQPVAADYEAMIRQGRVDLAILPGEMLDPAP--------ELRRESLFQDRY 172 Query: 181 CVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQ 240 + D ++ ++ + ++ D L G A L Sbjct: 173 VFAVDADDASIGDRLTIEQLASHRR-LATGDRELPALGDRQLD--GLTLDPAAELSTQTS 229 Query: 241 SLF--MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRN 298 L A L++ T R + V PLP + L W R Sbjct: 230 LLAPFFVAGT-GLIILTLQRLVDELG-WAGIRAVEPPLPLRTIDE-------CLFWSIRR 280 Query: 299 SHNPKIVWLRETIKNLYASM 318 + WLR+ I + Sbjct: 281 DSDVGHRWLRQEILTTAQQL 300 >UniRef50_P52661 HTH-type transcriptional regulator gbpR n=1 Tax=Azospirillum brasilense RepID=GBPR_AZOBR Length = 342 Score = 195 bits (497), Expect = 2e-48, Method: Composition-based stats. Identities = 47/303 (15%), Positives = 95/303 (31%), Gaps = 21/303 (6%) Query: 6 TTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPT 65 L L L L + R++ +AA + ++ A SK L L LF G+ P Sbjct: 14 ARLKLRHLQLFVALDEHRNLHRAAASLTMSQPAASKLLGDLEESLGVTLFERHGRGVEPN 73 Query: 66 PLMVSMEQNLAEWMQMSNLLLDKPHH-QTPRGLKFELAAESPLMMIMLNALSKQIYQRYP 124 M ++ + ++ + + + ++ + + + +P Sbjct: 74 WYGGLMIRHARTILSGLQEAGEELNDLLAGHSGSVSIGTVMAPAVELVVPVITTLTRDHP 133 Query: 125 QATIKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVW 183 I + D L + + +G +D H + DY+ + S+ C Sbjct: 134 DLKIAVAVETSDVLAERVRQGVMDFAIGRLPDHVDASC--------FDYQEISSEELCFV 185 Query: 184 LRKDHPALH--QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGR-ERTIAMSLPEFEQ 240 R HP L + + I ++ + + G + Sbjct: 186 CRDGHPLLRLGRPLTAADLVDATWILQPLGSLLRSRVEALFRAEGVPPPRKVIESASPVI 245 Query: 241 SLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 SL M A+ D++ + A Q ++ +V F P+ + W K Sbjct: 246 SLAMVAENDSVTV-FARALAQVFSPTGSCTIVPFHKRFSVE-------PYGIFWLKDRPL 297 Query: 301 NPK 303 +P Sbjct: 298 SPG 300 >UniRef50_B9JZE6 Transcriptional regulator LysR family n=1 Tax=Agrobacterium vitis S4 RepID=B9JZE6_AGRVS Length = 309 Score = 195 bits (497), Expect = 2e-48, Method: Composition-based stats. Identities = 41/322 (12%), Positives = 102/322 (31%), Gaps = 27/322 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L + +E +T+AA+R+ + +S+ + L LF+ P G++ T Sbjct: 2 IELRHLRYAVTVAEEGHLTRAAERLGLQQPPLSQQIKALETEVGVTLFIRQPRGMALTEA 61 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMI-MLNALSKQIYQRYPQ 125 V+ + + ++ ++ + + + + ++ ++ + + P Sbjct: 62 GVAFIARARQILADVDMAVEAAQRAARGEIGELAIGFTTSAVFHPLVPSIVRAMRLSSPS 121 Query: 126 ATIKLRNWD-YDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 ++L + L ++ G +D F + L + E + + + L Sbjct: 122 LKLRLDEGSTTELLCELSAGRLDAAFIR-----ATAGALPGSGPTLSIETVDIEDMVLAL 176 Query: 185 RKDHPAL-------HQTWNLDTFLRYPHISICWE--QSDTWALDNVLQELGRERTIAMSL 235 HP T L + Q + Q G +A Sbjct: 177 PDTHPLALHSQNGDRDTVALAALAGETFVLYRRPLAQGLYDRIIAACQAAGFSPNVAQEA 236 Query: 236 PEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWH 295 P+ +L + A L + + A L+ P +L + Sbjct: 237 PKLVSTLSLVAAGLGLSI-IPQSMARLETSGVAYRRFAP--------GSGLDAPLSLAYR 287 Query: 296 KRNSHNPKIVWLRETIKNLYAS 317 + + + E ++ ++ Sbjct: 288 RDSYR-GALKTFVEEVRRQVST 308 >UniRef50_B1M0B1 Transcriptional regulator, LysR family n=24 Tax=Proteobacteria RepID=B1M0B1_METRJ Length = 308 Score = 195 bits (497), Expect = 2e-48, Method: Composition-based stats. Identities = 51/316 (16%), Positives = 99/316 (31%), Gaps = 22/316 (6%) Query: 7 TLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTP 66 L+L + ++Q S T+AA +N++ A++ + +L D L + ++PT Sbjct: 2 DLNLRQVRAFVSVVQAGSFTRAAALLNLSQPALTVQIRRLEETLDARLLDRTSRTVAPTR 61 Query: 67 LMVSMEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNALSKQIYQRYPQ 125 L + ++ + ++ R +A +L+ + +P Sbjct: 62 LGRDLLPVFQRVLRDLDAVVVDTRDLAARRHGVVRVATLPSFAASVLSDAIVRFRAEHPA 121 Query: 126 ATIKLRNWDYDSLDAITRG-EVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 T ++++ + + RG E D+G G + +L D V Sbjct: 122 VTFRIKDVIAQRVLDLVRGEEADLGIVGGDVRDPEIGVLHRT----------RDALHVIY 171 Query: 185 RKDHPA-LHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 DHP + +P I + S +D GR +A ++ Sbjct: 172 PADHPIGALPRVTIAALAEHPLILMDPATSVRAVVDRAFIGSGRLPRVACEATYMMTAVS 231 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 M L L P + L A+ P E P L+ + P Sbjct: 232 MVRA--GLGLTILPGAAREIRAEPLLRSRAIDDPL-------FERPVCLIKKAGRTMPPA 282 Query: 304 IVWLRETIKNLYASMA 319 + + A Sbjct: 283 AEAFCRMVADRLADPG 298 >UniRef50_Q1GQE8 Transcriptional regulator, LysR family n=1 Tax=Sphingopyxis alaskensis RepID=Q1GQE8_SPHAL Length = 301 Score = 195 bits (497), Expect = 2e-48, Method: Composition-based stats. Identities = 49/290 (16%), Positives = 91/290 (31%), Gaps = 14/290 (4%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLG-LSPTP 66 ++L L + +M SVT+AA+ +N++ AVSK LA+L LF+ S L+ TP Sbjct: 1 MNLRHLEAFRAVMLSGSVTQAAQSLNLSQPAVSKMLAELEHQLGFQLFLRSRGSALTVTP 60 Query: 67 LMVSMEQNLAEWMQMSNLLLDKPHHQTP-RGLKFELAAESPLMMIMLNALSKQIYQRYPQ 125 + + L +AA L + L + + +P Sbjct: 61 EADAFFYEVERSFSGIAALKRVAEDIRNMATGTLRIAALPALAVSFLPRVIAAFRETHPG 120 Query: 126 ATIKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 T++L+ ++ + + DIG + I E L Sbjct: 121 VTVQLQTRSSSTVRQWMANQQFDIGLATPARELP----------GIRMERFLRCPGACVL 170 Query: 185 RKDHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 H P IS+ E +D + ++ G R + + Sbjct: 171 PAGHRLAVKDVIRPADLEGEPFISLALEDGVRHRIDRIFEDAGVHREMVIETQYAMTICA 230 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLL 293 + Q + Y + + A + F+ P + + Sbjct: 231 LVMQGVGCSILNPVTAADYAERGLTVRDFAPEVHFEYMLFTPKLRPMSQV 280 >UniRef50_A8FJ94 Possible LysR family transcriptional regulator n=2 Tax=Bacillus pumilus RepID=A8FJ94_BACP2 Length = 290 Score = 195 bits (497), Expect = 2e-48, Method: Composition-based stats. Identities = 49/308 (15%), Positives = 107/308 (34%), Gaps = 28/308 (9%) Query: 12 LLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSM 71 +++ S TKA +++ +T S VS ++AKL + L + GL+ T + Sbjct: 8 QYKVFLTVVECGSFTKAGEKLGLTQSGVSHNIAKLESELGVVLLRRNRNGLALTDAGERV 67 Query: 72 EQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNALSKQIYQRYPQATIKL 130 ++ + + ++LL + ++ S ML L ++YP ++L Sbjct: 68 MPHIRQIIHHASLLEQEAALIQGMEVGSIKIGTFSSFSSKMLPQLIHLFTKKYPNIQVEL 127 Query: 131 -RNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHP 189 + + I G +D+GF + + LF D V +++DH Sbjct: 128 YEGGYEEIEEWIASGTIDVGFLTQP------------SREFETIPLFQDELVVLMQEDHR 175 Query: 190 A-LHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQP 248 + +D+ I + +L+E G + + + + + M + Sbjct: 176 FNTKKVIEVDSLHDESFIMPKAGCDL--LIKKLLKERGVKPHVLFEIGDNNTLISMVQE- 232 Query: 249 DNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWLR 308 L + P Q+ ++ L + + L + +P Sbjct: 233 -GLGVTIIPTLIL-PPQMSHTKVIPL--------ETSVYREINLAFKSFKVASPSAKRWI 282 Query: 309 ETIKNLYA 316 E +K+ + Sbjct: 283 EVVKDHFK 290 >UniRef50_A3K9S7 Transcriptional regulator, LysR family protein n=1 Tax=Sagittula stellata E-37 RepID=A3K9S7_9RHOB Length = 312 Score = 195 bits (497), Expect = 2e-48, Method: Composition-based stats. Identities = 58/317 (18%), Positives = 119/317 (37%), Gaps = 22/317 (6%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 + L++ LL + + R++++A + + + +S LA LRA DD LF+ P G+ P Sbjct: 15 LRHLEIKHLLAFEAIYSTRNISRAGQALGFSQPTMSNLLATLRAVLDDRLFLRQPRGVQP 74 Query: 65 TPLMVSMEQNLAEWMQMSNLLLDKPHHQTPR--GLKFELAAESPLMMIMLNALSKQIYQR 122 T + + ++ + P +F++ A +++ +L ++ + Sbjct: 75 TSRADELITPVRSALREIERITKPRASFDPENDTREFKIHALDIFESLLIPSLVNRV-EG 133 Query: 123 YPQATIKLRNWD-YDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPC 181 P T KL ++A+ GE DI + + ++ + S Sbjct: 134 NPGITFKLLLAPKVPIVEALDSGEADIAIGMLPRNQP----------DLRWQDVLSLDLV 183 Query: 182 VWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQS 241 V RK HP + L H+++ + R + + Sbjct: 184 VIARKGHPRIDDQVTLQDLAELGHVAMDMAPGALANAHLFSLKNRPARRDVVRVTRPSAI 243 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 + + AQ D + A + + ++ + P+P F + WH RN + Sbjct: 244 IEIVAQTDLVGYANRRQLAASPWR-ERIQALEPPVPLSTQ-------DFQMTWHLRNQDD 295 Query: 302 PKIVWLRETIKNLYASM 318 P +VWLR+ I ++ + Sbjct: 296 PSLVWLRDEIVSILGRV 312 >UniRef50_Q47P44 Putative LysR-family transcriptional regulator n=1 Tax=Thermobifida fusca YX RepID=Q47P44_THEFY Length = 301 Score = 195 bits (497), Expect = 2e-48, Method: Composition-based stats. Identities = 56/313 (17%), Positives = 103/313 (32%), Gaps = 19/313 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 LD N L L + + S+T AA+R++ TP A+S+ LAKL L G+ T Sbjct: 2 LDANRLRVLVEVARAGSITAAAERLSFTPPALSQQLAKLERELGCALLERGRNGVRLTEA 61 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHH-QTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + + L A + +L + + + +P Sbjct: 62 GRVLLDHGERVLGELREAERAVRATLGQHPSTLSLGAFASAGTTLLPSALAEFRRAHPHV 121 Query: 127 TIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + L + D +T G++D+ + + E L +D + L Sbjct: 122 RLALSDVEPPDGYGLVTSGDLDLLITHCYPGTELPSA-----TGLRRERLLTDPLMLVLP 176 Query: 186 KDHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 HPA+ + L I + AL+ E G E T+A ++E +L + Sbjct: 177 DGHPAIDKPRITLADLADEEWICGAPGIHNRIALETAAAEAGVEVTVAYETRDYEVTLAL 236 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 + + P + HQ L L L++ R + Sbjct: 237 IRA--GVGIGLVPATILRTHPEHQWHAHQL-------SGTDLARTIFLVYRPR--LPEPV 285 Query: 305 VWLRETIKNLYAS 317 + T+++ Sbjct: 286 AAMAATLRDAARR 298 >UniRef50_B1M8F7 Transcriptional regulator, LysR family n=4 Tax=Rhizobiales RepID=B1M8F7_METRJ Length = 304 Score = 195 bits (497), Expect = 2e-48, Method: Composition-based stats. Identities = 52/314 (16%), Positives = 103/314 (32%), Gaps = 26/314 (8%) Query: 6 TTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPT 65 ++L L + + S T AA+ + V+ +S+ + L LF S + T Sbjct: 3 RPMELRHLRYFAAVAEHLSFTAAAQSLGVSQPPLSQQIRDLEVEIGVNLFERSSRRVVLT 62 Query: 66 PLMVSMEQNLAEWMQMSNLLLDKPHHQT-PRGLKFELAAESPLMMIMLNALSKQIYQRYP 124 N + + +D+ + S ++ L + QR+ Sbjct: 63 AAGEDFLGNARAVLAQVSDAVDRARTIGTGAAGILNIGMTSSVLAGPAGCLIRAFEQRFR 122 Query: 125 QATIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVW 183 +++ D + A+ D+ F + + + + CV Sbjct: 123 AVDVRIHEMAPTDQIAALKANRTDLSFLRSPPEDP----------DLVAHMAWPERLCVA 172 Query: 184 LRKDHPA-LHQTWNLDTFLRYPHISICWEQSDTWA-LDNVLQELGRERTIAMSLPEFEQS 241 + ++H ++ +D F P IS+ E S A + + + G +I+ + E Sbjct: 173 VPREHALAAGRSVAIDVFRSEPLISLGLESSRFAADIYHACIQRGFTPSISQQVNEASSL 232 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 + + A LA P + + +V LP+ + L L H R N Sbjct: 233 INLVAA--GFGLAIIPEFV---GRARHPDVVVLPI-----KPSFLSADVYALHHTRR--N 280 Query: 302 PKIVWLRETIKNLY 315 P I I+ Sbjct: 281 PVIDNFLALIREEA 294 >UniRef50_D0J3K7 Transcriptional regulator, LysR family n=3 Tax=Comamonadaceae RepID=D0J3K7_COMTE Length = 315 Score = 195 bits (497), Expect = 2e-48, Method: Composition-based stats. Identities = 44/275 (16%), Positives = 95/275 (34%), Gaps = 21/275 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L + ++ +V++AA+++ + +S+ L +L LF P G+ T Sbjct: 1 MELRHLRYFVAVAEQGNVSRAARKLFIAQPPLSQQLKQLEDEVGTQLFTRLPRGMQLTAA 60 Query: 68 MVSMEQNLAEWMQMSNLL-LDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 S+ ++ + + L + L M +L L + + + + Sbjct: 61 GESLLEDARVILARAEQAPLRARERERSSQTVLRLGLVPSAMQSLLPGLLRAVAKAGWEV 120 Query: 127 TIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 I+ R A+ +GE+++GF+ L+S+ D C+ + Sbjct: 121 QIEAREMISSQQQRALRQGELELGFARPGHREADELELASID----------DPYCLAVP 170 Query: 186 KDHPALHQT--WNLDTFLRYPHISICW--EQSDTWALDNVLQELGRERTIAMSLPEFEQS 241 HP + +L + P + + + E G I + Sbjct: 171 SSHPLAGGSGMLDLQAAVHQPFVGFTRYQDTDYFDRTVALCAEAGFTPLIRHEAGQLVNV 230 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPL 276 + A L +A P +++ +V PL Sbjct: 231 PALVAC--GLGVAIVPASFAMFHRE---QIVFRPL 260 >UniRef50_A5CSX6 Putative transcriptional regulator, LysR family n=1 Tax=Clavibacter michiganensis subsp. michiganensis NCPPB 382 RepID=A5CSX6_CLAM3 Length = 306 Score = 195 bits (497), Expect = 2e-48, Method: Composition-based stats. Identities = 68/309 (22%), Positives = 123/309 (39%), Gaps = 19/309 (6%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 + LDLNLL L L+ SVT+AA R+ ++P AVS++L +LR D + V + G+ P Sbjct: 1 MAQLDLNLLRVLDALVATSSVTEAASRLALSPPAVSRALGRLRVSMGDEILVRAGRGMVP 60 Query: 65 TPLMVSMEQNLAEWMQMSNLLLDKP-HHQTPRGLKFELAAESPLMMIMLNALSKQIYQRY 123 TP + + ++ + ++ L + F + L+ ++ AL++++ Sbjct: 61 TPFALRVAASVRALLDEADGLTRAGDDDPSTWNRAFTIRMNESLIPVLAPALTERVVAEA 120 Query: 124 PQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVW 183 P ++ + +A+ G +D+ R + P + L +D Sbjct: 121 PGVLLRFVPQESKDAEALRDGTLDLDVGIR----------MASPPDVLAAPLVADRFVAV 170 Query: 184 LRKDHPALHQ-TWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 + + T LD +PH+S +D+ L+ GR R + P + + Sbjct: 171 VGARTALGRKTTLTLDDLAAHPHVSASRRGRARGPVDDALEATGRTRRVVAVAPTYAVAA 230 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 M + P +PL A LPFD + + WH+R +P Sbjct: 231 LMVVGSG--SICLLPELMTERLIDGGVPLRAHRLPFDLPGVQVDQR-----WHRRADADP 283 Query: 303 KIVWLRETI 311 WLR + Sbjct: 284 ASRWLRRAL 292 >UniRef50_B7V886 Probable transcriptional regulator n=7 Tax=Pseudomonas RepID=B7V886_PSEA8 Length = 304 Score = 195 bits (497), Expect = 2e-48, Method: Composition-based stats. Identities = 52/305 (17%), Positives = 105/305 (34%), Gaps = 21/305 (6%) Query: 17 QLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSMEQNLA 76 LM+ +++ A+ + T +SK L +L PLF GL PTP +++ + Sbjct: 16 VSLMETGNLSGTARAAHTTQPGLSKWLKELEEDVGAPLFERHARGLRPTPYGMTLFNHAQ 75 Query: 77 EWMQMSNLLLDKPHHQTPRGL-KFELAAESPLMMIMLNALSKQIYQRYPQATIKLRNWDY 135 + + L ++ + RYP A ++L Sbjct: 76 RVLTEMERARQNLEAMRSGSGSRVLLGTSPASAPSLVPRALRAFLGRYPGAQVELLEGTM 135 Query: 136 D-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPALH-Q 193 + L+ + + ++D+ +++ ++ EVL+S+ V R HP Sbjct: 136 NGLLERLEKRQLDVVVGRLDNYAPRA--------SLRCEVLYSEAIVVMARPGHPLAQAA 187 Query: 194 TWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTI-AMSLPEFEQSLFMAAQPDNLL 252 + + RY I LD L + GR+ + ++ + D L Sbjct: 188 ALDWEDVRRYDWIVWPPGSPIRSKLDMALTQGGRQPPAYRLESSSMLANIELLRGSDMLS 247 Query: 253 LATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWLRETIK 312 + +A R ++ L + +AL +P E + W + L ++ Sbjct: 248 IGSA-RVVEHLAGLGLVARLALEIP--------GEGAVGMCWRDEPHRDRASEDLLACLR 298 Query: 313 NLYAS 317 A+ Sbjct: 299 EGAAA 303 >UniRef50_A6VSP2 Transcriptional regulator, LysR family n=1 Tax=Marinomonas sp. MWYL1 RepID=A6VSP2_MARMS Length = 296 Score = 195 bits (497), Expect = 2e-48, Method: Composition-based stats. Identities = 44/313 (14%), Positives = 96/313 (30%), Gaps = 24/313 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 + L + +E +AA R+++ +S+ + + LF S +S TP Sbjct: 1 MRFRKLNYFITVAEELHFGRAAARLHIAQPPLSQQIKAIEDEIGAVLFERSSQKVSLTPA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQT-PRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 ++ +Q + ++ L + Q Q Sbjct: 61 GEALLPQARALLQDWEKIQEQVRSIANGTSGNLSLGFVWAAGTPHFSKGIAQFKQDNHGV 120 Query: 127 TIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 T+ L +LDA+ ++D+ ++++ + + L Sbjct: 121 TLNLEEMTTTHALDALRTKKIDLAMIFLNPLMDIT--------DLEHQDYETQKHLLALP 172 Query: 186 KDHPALH-QTWNLDTFLRYPHISI--CWEQSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 ++HP ++ L + P IS S + + L G E I + + Sbjct: 173 ENHPLAQKESVPLSDLHQLPFISFVRQAHPSLYDQIMHHLHAAGVEPNIVQIARLTQTTR 232 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 + A + +A P +++ L + E+ +W K N P Sbjct: 233 TLVAA--GVGVALVPES-TQFDRREGLTYRPIDGVLP-------ELDIHFVWRK-NGLTP 281 Query: 303 KIVWLRETIKNLY 315 + L ++ Sbjct: 282 LMERLIAHLQEQV 294 >UniRef50_B1Y3F3 Transcriptional regulator, LysR family n=2 Tax=Burkholderiales RepID=B1Y3F3_LEPCP Length = 314 Score = 195 bits (497), Expect = 2e-48, Method: Composition-based stats. Identities = 40/329 (12%), Positives = 88/329 (26%), Gaps = 34/329 (10%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 + +L L + + S ++AA+++ ++ AVS L +L LF Sbjct: 1 MKDFNLRHLRIFETIASCGSFSRAAEQLGMSQPAVSMQLRQLETDLGTLLFERPQRQ-RL 59 Query: 65 TPLMVSMEQNLAEWMQMSNLLLDKPH------------HQTPRGLKFELAAESPLMMIML 112 T + Q+ + D L S Sbjct: 60 TDAGQDLLQHARVILAQVRATEDAMAVHEAEASGASAAGARGPRGLLHLGVVST-AHYFA 118 Query: 113 NALSKQIYQRYPQATIKL-RNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAID 171 L + ++R+P+ +KL + L + +DI +G ++ Sbjct: 119 PRLLSEFHRRHPEVRLKLTVAKRSEVLAMLQEHRLDIAITGYPPSEA----------DLE 168 Query: 172 YEVLFSDVPCVWLRKDHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERT 230 C+ H + I + L+++LQ + Sbjct: 169 AASFARHPHCIVAHPGHALARRRGLAWADLRDEEFIFREGGSATRQFLEHLLQSQSIQIK 228 Query: 231 IAMSLPEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPF 290 M L E + ++ + L + + Q + + Sbjct: 229 RGMELAGNETIKQAVMC--GMGISFLSAHTFQVELGAGL------MAVLDVQGMPKLIDW 280 Query: 291 TLLWHKRNSHNPKIVWLRETIKNLYASMA 319 + + R+ + A++A Sbjct: 281 CFVQRRDTLLTGANAAFRQFVFEEGATLA 309 >UniRef50_D2SB86 Transcriptional regulator, LysR family n=3 Tax=Actinomycetales RepID=D2SB86_9ACTO Length = 312 Score = 195 bits (497), Expect = 2e-48, Method: Composition-based stats. Identities = 35/308 (11%), Positives = 89/308 (28%), Gaps = 26/308 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +++ L + Q R +AA+R+++ S +S+++ +L A LF + + TP Sbjct: 1 MEIRQLQYFVAVAQTRHFGRAAERLHMAQSPLSQAIRQLEAQLGATLFDRTTRRVELTPA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQ-TPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 ++ + + + R + A L L++ + P Sbjct: 61 GEALLLDAERILGSIEAAQTRVRLVGAGRTGLLRVGATGLAAYRQLPQLARIATRELPGL 120 Query: 127 TIKLRN--WDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 ++ A+ +D+ + ++ + V + Sbjct: 121 QLRFEPDLLTPAQEQALEEDRIDLAVLRPPLRRA----------GLASRLVARERLVVAV 170 Query: 185 RKDHPALHQ-TWNLDTFLRYPHISIC-WEQSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 + H L + + A+ G + + L Sbjct: 171 PQSHRLAGDEPVRLAELRDEDFVVYGVPDSVVDGAVTQACLSAGFLPRRVHAAAQTSILL 230 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 + A L +A P ++ + L+ + ++ + + W + + Sbjct: 231 TLVAA--GLGVAVLPEAALAL-RVQGVQLIPV--------ADEVSIDLAIAWRREDPSPA 279 Query: 303 KIVWLRET 310 LR Sbjct: 280 LARLLRAL 287 >UniRef50_Q2RQL6 Transcriptional regulator, LysR family n=2 Tax=Rhodospirillaceae RepID=Q2RQL6_RHORT Length = 301 Score = 195 bits (496), Expect = 2e-48, Method: Composition-based stats. Identities = 41/306 (13%), Positives = 93/306 (30%), Gaps = 24/306 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 L L + + + +AA+ V+ +S +A++ A+ LF + + TP+ Sbjct: 2 FTLRQLRYIVAVADTLNFRRAAEVCLVSQPTLSVQIAEVEAFLGLTLFERTRRSVVLTPI 61 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQ-TPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + ++ +N ++D P L + L +L + +++P Sbjct: 62 GREIAERARGVLREANEIVDLARSLRAPLSGPLRLGVIATLGPYLLPYVLSAFREKHPSL 121 Query: 127 TIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + LR + GE+D+ +D LF + + Sbjct: 122 RLYLREDPSLRLERRLRAGELDLILVDMPIDDA----------GLDIMDLFFEPLWLAAP 171 Query: 186 KDHPALHQ-TWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 DH + +++ + + + ++ + +G + M Sbjct: 172 PDHALADRTRVSVEDLAGRDLLLLEEGHCLRDEVLDLCRRVGAREHGGFQATSLDTLRQM 231 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 A + LA P + +P L W K + ++ Sbjct: 232 VAS--RIGLALLPDLYVAAEAAQDPNIRMIPFSAP------PVRRVGLAWRKT---SARV 280 Query: 305 VWLRET 310 RE Sbjct: 281 AEFREF 286 >UniRef50_A9HZJ0 Transcriptional regulator, LysR-family n=2 Tax=Burkholderiales RepID=A9HZJ0_BORPD Length = 297 Score = 195 bits (496), Expect = 2e-48, Method: Composition-based stats. Identities = 42/310 (13%), Positives = 83/310 (26%), Gaps = 25/310 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +D L + +E S + AA+R++V+ +S + L L + + T Sbjct: 1 MDFRQLRYFVAVAEELSFSGAARRLHVSQPPLSLQIKALEEELGSVLLNRNNRKVELTEA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPL-MMIMLNALSKQIYQRYPQ 125 + + D + ++ + + M + + R+P Sbjct: 61 GTLFLEQARRALAYLERAGDVVRQAARGEAGELRVSFTASVPMFEAFPQIVQAFRARHPG 120 Query: 126 ATIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 A L + L A+ VDIGF L P I L++D L Sbjct: 121 ARADLIHLSTGQQLRALADKSVDIGFLRPSP-------LFEPPANIAVAQLWTDRLVAVL 173 Query: 185 RKDHPALHQ--TWNLDTFLRYPHISICW--EQSDTWALDNVLQELGRERTIAMSLPEFEQ 240 H + + I + + G + E Sbjct: 174 PAGHALARRPGPLPMAALADESFILFPRGLGCGLFEHVTVLASRAGFAPHVRQEAREGAT 233 Query: 241 SLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 + + A + ++ P + + + L + Sbjct: 234 IIGLVAA--GMGISVLPDTYMKTGIPG--------VTYCALDTRDAASRVLLAYRAD-DA 282 Query: 301 NPKIVWLRET 310 P + RET Sbjct: 283 APLLRRFRET 292 >UniRef50_A3VL76 Putative LysR-family transcriptional regulator n=1 Tax=Rhodobacterales bacterium HTCC2654 RepID=A3VL76_9RHOB Length = 302 Score = 195 bits (496), Expect = 2e-48, Method: Composition-based stats. Identities = 48/318 (15%), Positives = 98/318 (30%), Gaps = 22/318 (6%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 S++ L L L +Q + + ++ AA+ +N+T SA S + + LF + L Sbjct: 4 MSVSRLTLKQLRAIQQVYRTGQISAAAEALNITQSATSVLIRQAETVLGATLFERTTRSL 63 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQ-TPRGLKFELAAESPLMMIMLNALSKQIYQ 121 +P+ S+ + + + L + + L A + +L ++ Sbjct: 64 APSAAGESVIGLVERILGDLSTLEETIRGLRDLERGRIRLTATPATGLTLLPETVRRFRA 123 Query: 122 RYPQATIKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 YP ++ L + D I D G + +D++ L SD Sbjct: 124 AYPAVSLILDDCAPDQFYSNIIEQRADFGIGTEPEDKSA----------LDWQSLNSDPL 173 Query: 181 CVWLRKDHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFE 239 C+ DHP P I + ++ L +L + + Sbjct: 174 CIICAVDHPFAERDCVGWRELKDQPLILSRRDYGVRGMVETTLAKLNIRARVVAEVGFLG 233 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 + +M + A P + V L + L+ +R++ Sbjct: 234 SAAWM--SACGIGFAILPGRLARAQPAPGIRSVPL-------VDPVVARDAGLVKRRRHT 284 Query: 300 HNPKIVWLRETIKNLYAS 317 + E + Sbjct: 285 LSHSAERFIEMLAEDLQE 302 >UniRef50_A4JMP2 Transcriptional regulator, LysR family n=1 Tax=Burkholderia vietnamiensis G4 RepID=A4JMP2_BURVG Length = 299 Score = 195 bits (496), Expect = 2e-48, Method: Composition-based stats. Identities = 47/310 (15%), Positives = 98/310 (31%), Gaps = 25/310 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLS--PT 65 +DL ++++ + KAAKR+ ++ A+SK++ L L G++ T Sbjct: 1 MDLKAFRYFDEIVRQGNFGKAAKRLPLSQPALSKAIRLLEDELGVTLLERGRRGVAVKLT 60 Query: 66 PLMVSMEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQIYQRYP 124 + Q+ + + + L + A + +RYP Sbjct: 61 SAGEVVLQHARSILAERERMQFDLDALRDLDRGELRLGLPPVGSAELFAAPLAEFRERYP 120 Query: 125 QATIKLRN-WDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVW 183 +I L + A+ GE+++ + + + + + Sbjct: 121 GVSIHLHEHGSAELEQAVRDGELELAATMLPVRT-----------DLQAMFIRREPMVLA 169 Query: 184 LRKDHPA-LHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 + + H H +L P I++ + T L G + +L Sbjct: 170 VPRGHALETHVRVHLHELNGVPFIALNEGFALTRRLREACIAQGFTINEVAHSAQPNFAL 229 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 + A L + PR + + L+ L P LE ++W K + + Sbjct: 230 ALVAA--GLGVTCLPRLVARRHGNAGVRLIDLDAP-------GLEWRVAIVWRKGTTLSW 280 Query: 303 KIVWLRETIK 312 + IK Sbjct: 281 AARAWLDLIK 290 >UniRef50_D2ATF2 LysR family transcriptional regulator n=2 Tax=Actinomycetales RepID=D2ATF2_STRRD Length = 297 Score = 195 bits (496), Expect = 2e-48, Method: Composition-based stats. Identities = 48/318 (15%), Positives = 102/318 (32%), Gaps = 26/318 (8%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 L L L +L +E +AA+R+ + +S+ + +L PLF P + Sbjct: 1 MERPELGLQQLHAFAILAEELHFGRAAERLGIAQPPLSQQIRRLEVKVGHPLFTRGPGRV 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHH-QTPRGLKFELAAESPLMMIMLNALSKQIYQ 121 + TP + + + LD + + + L + +L L + Sbjct: 61 TLTPAGHELLPAARRALDEIAIGLDAARRTGNGEAGRLRIGFSASLALTLLPGLLRGYRD 120 Query: 122 RYPQATIKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 RYP +++R + A+ +DIG + E + S+ Sbjct: 121 RYPGVDMEIREMTTAPQVAALREHVIDIGLLREPPDEP----------GLVTETILSEEF 170 Query: 181 CVWLRKDHPALHQT-WNLDTFLRYPHISICW--EQSDTWALDNVLQELGRERTIAMSLPE 237 L HP Q ++ P + + + + +V + G E + E Sbjct: 171 VAILPTAHPLAGQRVVSIKALADEPFVLLPRSAGPTVHDQILDVCRSAGFEPRLGQHAVE 230 Query: 238 FEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKR 297 ++ + L ++ AP + + + + + W +R Sbjct: 231 WQTVSALVEA--GLGVSLAPASIRRIRLKG--------IAYRRIEPNTARSTVAMTW-RR 279 Query: 298 NSHNPKIVWLRETIKNLY 315 + NP + +N+ Sbjct: 280 DDRNPLVPRFLAAARNVA 297 >UniRef50_C9KMN5 Transcriptional regulator, LysR family n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KMN5_9FIRM Length = 310 Score = 195 bits (496), Expect = 2e-48, Method: Composition-based stats. Identities = 44/325 (13%), Positives = 103/325 (31%), Gaps = 37/325 (11%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +++ ++ + + S+++AA+++ ++ ++S+ L + PLF L PT + Sbjct: 1 MEIRHFHYIRTIYETGSISRAAEKLYISQPSLSQLLKSVEKKVGAPLFDRGSQPLRPTTI 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTP-RGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + M++ + + + L + + ++YP Sbjct: 61 GQKYLETAQRIMELDTEFHRYVEDELGCAQGNLVVGSSPFRSTYFLASFLPEFQEKYPGI 120 Query: 127 TIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 ++L +A+ G+ D+ + + + + L+S+ + L Sbjct: 121 RLQLAEHTSKRLEEAVLSGDADLIIATQPVDANA----------FSFAELYSEEMVLVLP 170 Query: 186 KDHPALHQ--------------TWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTI 231 H Q L P I + EQ L ++ +E G I Sbjct: 171 AGHELSKQYHLPQDCRGTLPLLPIGL--LKDTPFIQMHSEQKLHQQLLSLCEEAGFTPKI 228 Query: 232 AMSLPEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFT 291 + E +L +AA L P + Q ++ V Sbjct: 229 YLQTRSMETALTLAAA--GLGATLLPM---TLLRAFQPKTRPCYAALPTRPRRHALV--- 280 Query: 292 LLWHKRNSHNPKIVWLRETIKNLYA 316 W K++ + +++ N Sbjct: 281 -AWRKKSYLSHAARAFIDSLVNYCR 304 >UniRef50_A9BXG3 Transcriptional regulator, LysR family n=218 Tax=cellular organisms RepID=A9BXG3_DELAS Length = 354 Score = 195 bits (496), Expect = 2e-48, Method: Composition-based stats. Identities = 40/272 (14%), Positives = 89/272 (32%), Gaps = 17/272 (6%) Query: 8 LDLNLLLCLQLLMQER-SVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLS-PT 65 ++ L ++ ++ S+T+ A ++ + VS+ + +L +F+ + L+ T Sbjct: 43 MNFQQLRYVRETVRRGYSLTEVAHTLHTSQPGVSRQIRELEEELGVEIFIRAGKRLTGLT 102 Query: 66 PLMVSMEQNLAEWMQMSNLLLDKPHHQ-TPRGLKFELAAESPLMMIMLNALSKQIYQRYP 124 P ++ + M ++ L + +AA L + + QRYP Sbjct: 103 PPGEALLPIVERLMLEADNLRRVGADFSASEQGRLSIAATHSQARYALPHVVRDFRQRYP 162 Query: 125 QATIKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVW 183 Q + L + + + GE DIG + + + V Sbjct: 163 QVRLHLHQGSPEQVAQMLRSGEADIGVATEALAGYE---------GLVALPCYRWTHGVV 213 Query: 184 LRKDHPAL--HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQS 241 + HP L Q L+ R+P I+ + +D G E + ++ + + Sbjct: 214 VPPGHPLLQSQQALTLEALSRFPIITYEQGYTGRAHIDEAFAREGLEPDVVLTAMDADVI 273 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVA 273 + + + L + Sbjct: 274 KTYVELDMGVGI--VASVALDAERDQGLRTLD 303 >UniRef50_A1TIM2 Transcriptional regulator, LysR family n=2 Tax=Acidovorax RepID=A1TIM2_ACIAC Length = 308 Score = 195 bits (496), Expect = 2e-48, Method: Composition-based stats. Identities = 43/308 (13%), Positives = 95/308 (30%), Gaps = 23/308 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L + + +T++A + VT S +S L +L A PLF GL + Sbjct: 1 MELRQLRYFLSVAETEHLTQSADALFVTQSTLSHGLRQLEAELGLPLFDRLGRGLKLSQA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNALSKQIYQRYPQA 126 ++ + A +Q + + ++ YP Sbjct: 61 GMAFRSHAARALQELEAGRMALADMAGLQAGTLTVGVIPTFLTHLVPDAVAAFSADYPGV 120 Query: 127 TIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + +R+ + + G +D+G S +H I+ E LF + + + Sbjct: 121 QVVVRDLRGGPIEEQLIAGRLDVGISFHPAHRE----------EIEAEPLFEERLQLVVH 170 Query: 186 KDH-PALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 H A +T P + + +D + G + + + + L Sbjct: 171 AGHALARRRTLRTRELAGVPLALLPRSFATRRMIDAAFAQAGVVPVVRVEMESVDALLHA 230 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 +A + + A+ L + ++ +LW + S + Sbjct: 231 CRGGPLATIA-----AERAAGQAGPDMRAITLTEPATVRRA-----GVLWRRGASRSAAA 280 Query: 305 VWLRETIK 312 ++ Sbjct: 281 REFVARLR 288 >UniRef50_A4XEX1 Transcriptional regulator, LysR family n=2 Tax=Sphingomonadaceae RepID=A4XEX1_NOVAD Length = 299 Score = 195 bits (496), Expect = 2e-48, Method: Composition-based stats. Identities = 40/275 (14%), Positives = 85/275 (30%), Gaps = 15/275 (5%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +DL L L + + +AA+R++++ ++ ++ KL LF P G+ T Sbjct: 1 MDLRQLRYFSTLAETLNFHRAAERLHMSQPPLTVAIRKLEEDLGVALFERDPRGVRLTAA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHH-QTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + E + + + + + + + ++ + Q YPQ Sbjct: 61 GRAALDPAREALAAAERVREVVRQGAAGLRGRLSIGFIGSAIGELVPRIVSPFRQAYPQV 120 Query: 127 TIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + L + + + AI +D+G S + + DV + Sbjct: 121 ELVLEEMNSVEIVRAIAARRLDLGLVRLPVLDSSPVEIDVIE---------RDVLVAAIP 171 Query: 186 KDHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 ++ + L I A Q G +A + + L + Sbjct: 172 REDALARRREVALGDLSERSFILYSSVSVLHAATRLACQRAGFVPRVAQEATQVQTILSL 231 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFD 279 L +A P + + +V L P Sbjct: 232 VEA--GLGVALIPARSARFAGA-GVRIVPLAEPIP 263 >UniRef50_Q5LR91 Transcriptional regulator, LysR family n=3 Tax=Rhodobacterales RepID=Q5LR91_SILPO Length = 310 Score = 195 bits (496), Expect = 2e-48, Method: Composition-based stats. Identities = 43/314 (13%), Positives = 97/314 (30%), Gaps = 22/314 (7%) Query: 7 TLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTP 66 + L L L+ +AA+ + ++ ++S +A L L GL TP Sbjct: 4 DITLRQLSYFSTLVAAGQYRRAARSLGISQPSLSLQIAALEKAVGARLLERRRSGLILTP 63 Query: 67 LMVSMEQNLAEWMQMSNLL-LDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQ 125 + + +A ++ L L + L + + +L + +Q++++YP+ Sbjct: 64 EGRDVSEMVARILREVEALTLYASPMRDNMTGTLRLGSTPTIGPYLLPRVLRQLHRQYPR 123 Query: 126 ATIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 + +R+ D ++ + G D+ + L I LF + + + Sbjct: 124 LKLAIRDGAPRDLVEDLAAGRYDLILT----------HLPVSRDDIRVAPLFREPLELAV 173 Query: 185 RKDHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 H T +S+ + + + + G + + Sbjct: 174 DPAHRLAGATQVRQADLAGETMLSLSSGYALHGQVQALCESAGARLSTEFEGTSLDALRQ 233 Query: 244 MAAQPDNLLLATAPRY-CQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 M + + P + +V PL + + L W + P Sbjct: 234 MV--SLGMGITLLPALYVASEVRTRGADVVTRPL------RPAIHRIVGLAWRTASGTPP 285 Query: 303 KIVWLRETIKNLYA 316 I E + + Sbjct: 286 AIERFTELTRQVIR 299 >UniRef50_P94387 Uncharacterized HTH-type transcriptional regulator ycgK n=2 Tax=Bacillus RepID=YCGK_BACSU Length = 324 Score = 195 bits (496), Expect = 2e-48, Method: Composition-based stats. Identities = 49/331 (14%), Positives = 106/331 (32%), Gaps = 42/331 (12%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +D+ ++ + + +S TKAA+ +++ ++S+ + KL A LF S ++ TP Sbjct: 1 MDIKVMEYAAEIARRQSFTKAAEHLHIAQPSLSQQIKKLEAELGLTLFHRSHGSVTLTPH 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRGLK-FELAAESPLMMIMLNALSKQIYQRYPQA 126 + + ++ + LL + ++ + + + L KQ RYP Sbjct: 61 GRRFIEKAEDIIRSRDDLLREMQERSQGIGHKLSIGIPAVTGRYLFPPLLKQFLARYPHV 120 Query: 127 TIKLRNWDYDSLDAI-TRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 ++L D SL+ + +GEVD+ + L ++ + + Sbjct: 121 EVQLVEKDPVSLEKMTAKGEVDLSVLSLPIEDE----------RLSITPLLTEPVVLAVP 170 Query: 186 KDH---------PALHQT----------WNLDTFLRYPHISICWEQSDTWALDNVLQELG 226 K+ + + +D P I + + ++ E G Sbjct: 171 KEKQRWMPPELVALIEKALEEDEGRQPCVPIDMVRNVPFILLKEGFGFRRTVLDLCAESG 230 Query: 227 RERTIAMSLPEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKL 286 + A E + + A + L + AP + P S Q Sbjct: 231 FKPNAAFKTSHIETAQSLVA--NGLGVTMAPNMVRRDKD---------PGVIYLSIQSAP 279 Query: 287 EVPFTLLWHKRNSHNPKIVWLRETIKNLYAS 317 ++ K + E + Sbjct: 280 SRTLVFVFLKNRYVSLTAQAFMELSRESLKQ 310 >UniRef50_B8E7T8 Transcriptional regulator, LysR family n=7 Tax=Shewanella RepID=B8E7T8_SHEB2 Length = 313 Score = 195 bits (496), Expect = 2e-48, Method: Composition-based stats. Identities = 57/315 (18%), Positives = 119/315 (37%), Gaps = 25/315 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 LDLNLL ++ + RS T+AA+ +++T S+VS ++++ R W + LF G+ PT + Sbjct: 7 LDLNLLRVFMVVYRTRSFTQAAEELDLTQSSVSNAISRFRVWVGESLFNRVGRGIEPTAV 66 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTP--RGLKFELAAESPLMMIMLNALSKQIYQRYPQ 125 M + + M +L H P +F + A ++ + + + Sbjct: 67 AREMYRKFEQPMADIETVLLGFEHFDPKCSQRRFYVYANESVIEALQTGVQALLQDA--D 124 Query: 126 ATIKLRNWDY---DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCV 182 + R D I V + + + + ++LF++ Sbjct: 125 IEVIFRESPPQEADLYRDILLERVAVAIDIKPAQQSL----------LSSKLLFTETLVC 174 Query: 183 WLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 + + HP + + H+ + + + A D + + R + Sbjct: 175 IVSRQHPRIQGAITHGQYFEEKHVFLNMRRFNLTAGDLFTEGVLPRRKMYSEQSSLLSMF 234 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 + + + +A RY Y +L + ++ +PL K + ++W + + NP Sbjct: 235 ATVGKSEAIGIAPL-RYASQYAELFGIQILPMPL-------KTRPIDLYMVWSSKYTQNP 286 Query: 303 KIVWLRETIKNLYAS 317 WLR + + AS Sbjct: 287 SHQWLRSLLLDASAS 301 >UniRef50_B8J293 Transcriptional regulator, LysR family n=1 Tax=Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 RepID=B8J293_DESDA Length = 308 Score = 195 bits (496), Expect = 3e-48, Method: Composition-based stats. Identities = 53/313 (16%), Positives = 106/313 (33%), Gaps = 24/313 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++++ L + + + T+AA+ + +T AVS + L PLF S ++ T Sbjct: 1 MNIDHLKTFHKIAETGNFTQAARDLFLTQPAVSMQVQSLENSLGVPLFDRSRRKVNLTSE 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + + N + D+ + + L A + + L +QR+P Sbjct: 61 GRVLYEYTQRIFSLVNQMQDEFQSLSQLDTGRLVLGASAIMSAYYLPGYMVLFHQRHPGV 120 Query: 127 TIKL-RNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 T+ L + + + + RGE++IGF G + L + V Sbjct: 121 TLDLAVHNSHVIAEKVYRGELEIGFCGSSP----------SHPNLRAHFLHREPLIVVAG 170 Query: 186 KDHPALHQ--TWNLDTFLRYPHISICWEQSDTWALDNVLQEL--GRERTIAMSLPEFEQS 241 + + D L +P I T + + ER M++ E + Sbjct: 171 RKSALAQKDGPVCADDLLAHPFILREQGTRVTNKVQEWFKTHAGRPERPSFMTVDNMEVA 230 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 + + L + PRY L L L L V ++L++ + + Sbjct: 231 KQLVI--NGLGVTALPRYAAALELAAG-QLTQLRLE-----SFDLHVNYSLVYMEGQRLS 282 Query: 302 PKIVWLRETIKNL 314 + + L Sbjct: 283 RTVTHFLALLFEL 295 >UniRef50_Q20XL9 Transcriptional regulator, LysR family n=1 Tax=Rhodopseudomonas palustris BisB18 RepID=Q20XL9_RHOPB Length = 297 Score = 194 bits (495), Expect = 3e-48, Method: Composition-based stats. Identities = 45/310 (14%), Positives = 101/310 (32%), Gaps = 26/310 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++ + L C + + T+AA+R++++ A+S + KL LF S + T Sbjct: 1 MESSQLRCFLEVAETLHFTRAAERLHLSQPALSTQIEKLERELGVDLFERSHKKTTLTYS 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + + + + +++ + + S ++ L ++ P Sbjct: 61 GTLYREEARKILALGSRAVERARQAAAGQIGRLRIGFISTAAAYVIPQLVSDFRKQAPNV 120 Query: 127 TIKLRN-WDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + LR+ ++ + GE+DIGF P + ++ + ++L Sbjct: 121 ELDLRHYLTAQQVNLLCGGELDIGFLRIPLRE---------PRGLSTILVHEEPYKLFLP 171 Query: 186 KDHPAL-HQTWNLDTFLRYPHISICW--EQSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 HP L ++ L V+ + G + + Sbjct: 172 ATHPLASQARLELQDLDGAEFVTYSKLNAPGFAETLATVMLQAGIRPAATHEASDMYSLI 231 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 + + + +A AP Q Y +L L + L Q L H+ +P Sbjct: 232 SLVSA--GVGIAIAPASLQNY-RLPNLVIRDL--------QGIRPSEVALA-HRDGIDHP 279 Query: 303 KIVWLRETIK 312 + + Sbjct: 280 AALAFIRAAR 289 >UniRef50_A0R7B5 LysR-family protein transcriptional regulator n=4 Tax=Mycobacterium RepID=A0R7B5_MYCS2 Length = 310 Score = 194 bits (495), Expect = 3e-48, Method: Composition-based stats. Identities = 52/314 (16%), Positives = 102/314 (32%), Gaps = 27/314 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L + +E S T+AA+R++V SA+S S+AKL L + +S T Sbjct: 1 MELRQLEHFVAVAEELSFTRAAQRVHVVQSALSSSVAKLERELGVELLDRTRQQISLTAA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTP-RGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 ++ + +D + + + + ++ +P Sbjct: 61 GDRFRTYALGVLREARNAVDVVSEFRGELSGTVDFGSLISFGPMDVARALGDFHRAHPHV 120 Query: 127 TIKLR---NWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVW 183 ++LR + L + G +D+ + P ++ +LF + Sbjct: 121 RLRLRLSQSGASAYLSGLIEGSLDLALISVP---------NRFPPQLEMRLLFEEPMVFV 171 Query: 184 LRKDHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLP-EFEQS 241 R DHP + +LD + E D+ + G + +P F Sbjct: 172 CRPDHPVARRRRVSLDVLGTEDLVGFPPEFGLRRLTDDAFRAAGVQARTQYEVPAGFAAV 231 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 + A + L A P +L L V L + + L + Sbjct: 232 ADLVA--NGLGTALMP--ASEARRLGNLTAVTL--------ETAVIWQVYLASPPADRMT 279 Query: 302 PKIVWLRETIKNLY 315 P L +T+ + Sbjct: 280 PATARLADTLLDEA 293 >UniRef50_D0J6E9 Transcriptional regulator, LysR family n=2 Tax=Comamonas testosteroni CNB-2 RepID=D0J6E9_COMTE Length = 317 Score = 194 bits (495), Expect = 3e-48, Method: Composition-based stats. Identities = 61/304 (20%), Positives = 114/304 (37%), Gaps = 18/304 (5%) Query: 15 CLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSMEQN 74 L + RSV AA + ++PSA S +LA+LR D LF S + PTP M + Sbjct: 25 VFDALFRHRSVVAAADELAISPSACSHALARLREGLGDELFFRSGSSMQPTPRATEMAEG 84 Query: 75 LAEWMQMSNLLLDKPHHQTP--RGLKFELAAESPLMMIMLNALSKQIYQRYPQATIKLRN 132 + + + L P P F AA ++ AL +I P +++ + Sbjct: 85 ITLALHTLSDQLGDPAAFAPGSSTQSFTFAATDFTTFALMPALISRIEHEAPHVRLRVVH 144 Query: 133 W-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPAL 191 D+ + + + ++E + L +D V R+ HP + Sbjct: 145 SRHRDAYSDLVQEGAHFVMGFSDEFSPAQEGVEVLQGH-------TDAYVVVARRGHPRI 197 Query: 192 HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQPDNL 251 + ++ +L H+ + Q + +D+ L + G R IA+ LP + F+ A D L Sbjct: 198 GKRLSMAQYLAERHVVVKPWQEEKGVIDSALSKGGWTREIAIELPSVMAAPFIVANSD-L 256 Query: 252 LLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWLRETI 311 L+ + + P + + R+ +P W+R + Sbjct: 257 LITLPRMAALQLEASAAIAIFKAPFEVP-------SYTLNVYFQHRHLSSPWHRWMRARL 309 Query: 312 KNLY 315 +++ Sbjct: 310 ESIL 313 >UniRef50_D0LQN8 Transcriptional regulator, LysR family n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LQN8_HALO1 Length = 302 Score = 194 bits (495), Expect = 3e-48, Method: Composition-based stats. Identities = 67/316 (21%), Positives = 137/316 (43%), Gaps = 20/316 (6%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 +++ +D+NLL+ L L+ RSVT+AA ++PSA+S+ L +LR F+D L V L Sbjct: 5 RNLHAVDMNLLVALDALLTTRSVTRAAGLAGLSPSAMSRVLGRLRDLFEDELLVRVGHEL 64 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPH-HQTPRGLKFELAAESPLMMIMLNALSKQIYQ 121 PT ++ L ++ + LL P + + + L ++L +L + + Sbjct: 65 LPTARAQQVQPRLRVLLRDTEQLLSPPATSASEFEGRLTVLLTEHLAKLVLPSLLVCVRE 124 Query: 122 RYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPC 181 P+ + +R+ A+ +G+ ++ ++ LF++ Sbjct: 125 EAPRLALDVRHPGPYPESALQQGDA----------VLWVDVTYEPDPSLQAVALFAEPYL 174 Query: 182 VWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQS 241 +R +HP + LD ++ YPH+S+ +D +L+ GR R +A+++ F Sbjct: 175 SVVRCEHPLVGTPVGLDDWVAYPHVSVSVRGWGRSDVDIMLERAGRTRHVALTVHAFALV 234 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 + D ++T P + ++ P+ + WH+R+ + Sbjct: 235 ADVVVCGDY--VSTMPARLAQRLVDERHTVLTPPIELP-------PLSIYACWHRRSDTD 285 Query: 302 PKIVWLRETIKNLYAS 317 P+ W+R+ + L+A Sbjct: 286 PRAAWIRQKVLELFAG 301 >UniRef50_B3DZ70 Transcriptional regulator, LysR/CysB family n=5 Tax=Verrucomicrobia RepID=B3DZ70_METI4 Length = 309 Score = 194 bits (495), Expect = 3e-48, Method: Composition-based stats. Identities = 50/308 (16%), Positives = 93/308 (30%), Gaps = 21/308 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 + + L + L++ RS +KAA+ ++ SAVS+ + L F PL + T Sbjct: 1 MQIETLKAFRDLVESRSFSKAAQLNKISQSAVSQQIRSLEERFGVPLIERGSRKVQLTKE 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQ-TPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + E + + + K ++A + + L K+ + YP+ Sbjct: 61 GEILYHAAREIVDIYTRIEAKITEIKASVSGNIRVSAIYSVGLHELPYYLKKFLKLYPEV 120 Query: 127 TIKLR-NWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 I++ I G DIG S + I E D V Sbjct: 121 NIRVEYRHSRQVYQDIIEGNSDIGIVAYPSPRKL----------IKIEPFRKDRMVVICS 170 Query: 186 KDHPALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 H + L+ R I+ + LD + ++ G E M E Sbjct: 171 PTHRFSQLKEVGLEEIAREGFIAFSSDMPTRRELDKLFRDRGLEFRPVMEFDNVETVKRA 230 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 + + + L ++ L P +L+ P + Sbjct: 231 VEIDAGVAIVPM-ATITQEIRNGTLKMLEL-------SGPPCYRPIGILYKSGRMLTPAM 282 Query: 305 VWLRETIK 312 E ++ Sbjct: 283 RKFIEILQ 290 >UniRef50_A6UK78 Transcriptional regulator, LysR family n=2 Tax=Sinorhizobium RepID=A6UK78_SINMW Length = 310 Score = 194 bits (495), Expect = 3e-48, Method: Composition-based stats. Identities = 76/300 (25%), Positives = 125/300 (41%), Gaps = 20/300 (6%) Query: 21 QERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSMEQNLAEWMQ 80 +ERSVT+AA R+ ++ A S++LA+LR F D + V+ P G T M +L + Sbjct: 28 EERSVTRAATRLGMSQPAASRALARLRVLFSDAILVDGPGGYLLTARAEEMRPSLRNTLA 87 Query: 81 MSNLLLD-KPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQATIKLRNWDYDSLD 139 N LLD + L ++ L + ++ P +++ + L+ Sbjct: 88 GVNELLDGRTFDPMRATGAVRLLMLDLEAAVLAPRLISSLAEQAPAVDLQVVSPGLRPLE 147 Query: 140 AITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPALHQTWNLDT 199 A+ VD ++ P I L+ D +R DHPA Q L Sbjct: 148 ALEADAVDAVIG----------VVDEAPAGIRKRKLYQDGFVTLMRADHPAAGQKLTLQR 197 Query: 200 FLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQPDNLLLATAPRY 259 FL H+ + + +D +L LGR+R + + +P F ++ +AA+ D L+ T P Sbjct: 198 FLELDHVVVSITGTGPAWVDEILARLGRQRRVKVRVPSFFAAVEIAARSD--LVITLPSS 255 Query: 260 CQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWLRETIKNLYASMA 319 + + + PL V +L WH RN P+ VWLR TI + + Sbjct: 256 LARTADMRRFVMTPPPLDL-------GSVVMSLAWHGRNQDAPRHVWLRRTIVTAVSDIG 308 >UniRef50_B6J4H7 Hydrogen peroxide-inducible gene activator n=7 Tax=Coxiella burnetii RepID=B6J4H7_COXB1 Length = 313 Score = 194 bits (495), Expect = 3e-48, Method: Composition-based stats. Identities = 43/297 (14%), Positives = 83/297 (27%), Gaps = 33/297 (11%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +++ L L + KAA++ V+ +S L KL LF + + TP+ Sbjct: 1 MNIRDLKYLLAVADSAHFGKAAEKCFVSQPTLSAQLKKLEEELGVRLFERNNKRVLITPI 60 Query: 68 MVSMEQNLAEWMQMSNLL-LDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + +Q L + + Q P F L L +L + + +R P+ Sbjct: 61 GQIIAAQVRVILQEVEKLKVLAQNAQDPFAGVFHLGIIPTLGPYLLPIILEIFKKRLPKL 120 Query: 127 TIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + + + L + +G +D + + LF + V L Sbjct: 121 NLVVYENKTENILHELQQGRLDAVILALPVSAP----------NLVVQELFCEPFYVALP 170 Query: 186 KDHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQ------ELGRERTIAMSLPEF 238 K HP ++ L + + + E G + Sbjct: 171 KHHPLAKKKSVTLADLEKETLLLLEEGHCLREQALEACSMTAAKTETGFKAK----ATSL 226 Query: 239 EQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWH 295 E + A + P + L +LW Sbjct: 227 ETLRHLVAA--GAGITLLPALSVNAEKSE--------LAIKSFNATIPSRSIGMLWR 273 >UniRef50_A8FAL6 LysR family transcriptional regulator n=10 Tax=Bacillus RepID=A8FAL6_BACP2 Length = 298 Score = 194 bits (495), Expect = 3e-48, Method: Composition-based stats. Identities = 47/319 (14%), Positives = 102/319 (31%), Gaps = 35/319 (10%) Query: 3 KSITTLDLNLLLCLQL-LMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSP-L 60 S D+ +++ S T AA+ +N+T SAVS ++A L +D LF+ Sbjct: 1 MSFVRFDI------VAKVVELGSFTAAAEALNMTQSAVSHAVASLETEWDVSLFIRDRKK 54 Query: 61 GLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTP-RGLKFELAAESPLMMIMLNALSKQI 119 G+ T + ++ ++ E + + + + + +L L Sbjct: 55 GIMLTDIGQTLLPHIREVLNRLEKIQQEIALTKNIETGLIRIGTFASASACLLPKLLVSY 114 Query: 120 YQRYPQATIKLRNWD-YDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSD 178 +++P+ K + L+ + G +D+GF + + +LL L D Sbjct: 115 QKKHPKIEFKFYEGTYEEILEWLDSGIIDVGFVVKGYADEAFDLLP----------LIKD 164 Query: 179 VPCVWLRKDHPALHQTW-NLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPE 237 V +H Q+ ++ P I ++++ E + + + Sbjct: 165 EMVVAYHPNHRFHQQSIVDITDLADEPFIMPT--GMYQSHVEDIFAEAQLKPATLFEVHD 222 Query: 238 FEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKR 297 M + L + P QL + L Sbjct: 223 CTTIARMV--GEGLGVTIGPELFLKTQQLVHIR----------QLNVSHHREVALACPSL 270 Query: 298 NSHNPKIVWLRETIKNLYA 316 + +P + + ++A Sbjct: 271 SQASPAVKEFFHVAEAVFA 289 >UniRef50_A4EQ42 Transcriptional regulator, LysR family protein n=1 Tax=Roseobacter sp. SK209-2-6 RepID=A4EQ42_9RHOB Length = 330 Score = 194 bits (495), Expect = 3e-48, Method: Composition-based stats. Identities = 41/318 (12%), Positives = 91/318 (28%), Gaps = 21/318 (6%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVN-SPLGLS 63 +T + L Q + ++ + AA+ V+ A+++++ KL LF G+ Sbjct: 26 MTRITLRQCAYFQAVARKGGIAAAAETAGVSQPAIAQAITKLEDLTGLVLFRRLHARGME 85 Query: 64 PTPLMVSMEQNLAEWMQMSNLLLDKPHHQT-PRGLKFELAAESPLMMIMLNALSKQIYQR 122 TP ++ + + +++ + R L L L + ++ Sbjct: 86 LTPQGREFLRHADQLLALADQMDMAVEDIAQQRRGTLRLGCFQSLAPFFLAQILTGYQRQ 145 Query: 123 YPQATIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPC 181 P + L + A+ E+D+ + L P Sbjct: 146 APDVVLNLSEMLQEELTTALQENELDLAILYDLGLDARL---------FNIHPLAEPQPY 196 Query: 182 VWLRKDHPALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQ 240 + + + HP ++ + QS + IA E Sbjct: 197 LIVPQGHPLAGQDRVSIRALDGEDFVLFDAPQS-REYFHAQFAHHEIKPRIAYRSASIET 255 Query: 241 SLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 A L + + + + VAL + P + + Sbjct: 256 VRSYVANGLGLSILSMRPVSDLTYEGKSVVPVAL-------TEGFGATPIVIATRAGVAE 308 Query: 301 NPKIVWLRETIKNLYASM 318 + + L + L+A + Sbjct: 309 DALLAPLIAFCQELFAEL 326 >UniRef50_A5W7U4 Transcriptional regulator, LysR family n=17 Tax=Proteobacteria RepID=A5W7U4_PSEP1 Length = 308 Score = 194 bits (495), Expect = 3e-48, Method: Composition-based stats. Identities = 44/314 (14%), Positives = 96/314 (30%), Gaps = 21/314 (6%) Query: 7 TLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTP 66 L + + Q +SV++AA + ++ SA S S+ +L LF + L+ Sbjct: 2 RFTLRQMQVFVAVAQHQSVSRAASLLALSQSAASTSITELERQSSCQLFDRAGKRLALNA 61 Query: 67 LMVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 L + + + + D + ++ + A + + L Q +P++ Sbjct: 62 LGHQLLPQAVALLDQAKEIEDLLNGKSGF-GSLAVGATLTIGNYLATLLIGNYMQTHPES 120 Query: 127 TIKLR-NWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 +KL + + E+D+G + + ++ + D V+ Sbjct: 121 QVKLHVQNTAHIVQQVAHYEIDLGLIEGDCN----------HPDLEVQPWVEDELVVFCA 170 Query: 186 KDHPALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 HP ++++ + I D ++ I + L E Sbjct: 171 PQHPLAKLGRADIESLSQEAWILREQGSGTRLTFDQAMRHHRANLNIRLELEHTEAIKRA 230 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 L + R + P+ E F +WHK+ + Sbjct: 231 VES--GLGIGCISRLALRDAFRRGSLV---PVETPELDLL---RQFYFIWHKQKYQTSAM 282 Query: 305 VWLRETIKNLYASM 318 E ++ A Sbjct: 283 REFLELCRSFTAGF 296 >UniRef50_C7PZR8 Transcriptional regulator, LysR family n=1 Tax=Catenulispora acidiphila DSM 44928 RepID=C7PZR8_CATAD Length = 301 Score = 194 bits (495), Expect = 3e-48, Method: Composition-based stats. Identities = 46/317 (14%), Positives = 90/317 (28%), Gaps = 29/317 (9%) Query: 1 MKKSITTLD---LNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVN 57 M+ +D L L L R +T A + V+ +S++LA++ A LF Sbjct: 1 MRIDRRIVDAVLLRDLSWFVALADHRHMTDTAAILGVSQPTLSRALARVEAELGTRLFER 60 Query: 58 SPLGLSPTPLMVSMEQNLAEWMQMSNLLLDKP-HHQTPRGLKFELAAESPLMMIMLNALS 116 +P G++P P + + + L + P G LA + ++ L Sbjct: 61 APDGVAPNPNGDLVVAAARDLLARYEQLTTELSARLDPDGGVVRLAFLDSMGTSLVPQLL 120 Query: 117 KQIYQRYPQATIKL-RNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVL 175 + + P + L + + L + G ++ + + L Sbjct: 121 RAFHLHAPGVRVLLSQEPGHAILADLRTGAAELAVTFPRPAG-----------DFGWLPL 169 Query: 176 FSDVPCVWLRKDHPA-LHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMS 234 + + + H + L + +D +L E G I+ Sbjct: 170 HRERLVLAVPPTHRLHARKRVALSELADEELVMTPVGFGFRTLVDRLLAEAGVVPRISFE 229 Query: 235 LPEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLW 294 + + A L +A P + + L L W Sbjct: 230 SADLSTIEGLVAA--GLGVAVIPEQLVGPSGTVAIAL----------TTPAARRTVGLTW 277 Query: 295 HKRNSHNPKIVWLRETI 311 + P I Sbjct: 278 RTDQALAPAAARFLAFI 294 >UniRef50_B2T513 Transcriptional regulator, LysR family n=65 Tax=Proteobacteria RepID=B2T513_BURPP Length = 305 Score = 194 bits (495), Expect = 3e-48, Method: Composition-based stats. Identities = 44/284 (15%), Positives = 83/284 (29%), Gaps = 24/284 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 + + L+ + + R++++AA ++++ AVS L +L+ F +PL+ G+ TP Sbjct: 1 MTPDQLITFAAVAEHRNISRAAVALHLSQPAVSGQLRQLQDEFGEPLYQRDGRGVRLTPA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + A + +L L ++RYP Sbjct: 61 GEQLASYATRLRDTWRQAHAYRDALRGLEQGTLRIGASTTPASYLLPYLIADFHRRYPDV 120 Query: 127 TIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 T+ + + + A+ VDI LP D + Sbjct: 121 TLHTADGNTTEIVGALDS--VDIAMIEGPVGV-------DLPPDTAVHSWREDEIVAIMP 171 Query: 186 KDHPAL-------------HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIA 232 + HP L F YP + ++ G +A Sbjct: 172 RTHPLAELALSAQSAEVGQGGQAGLAAFGEYPLVLREAGSGVRQIVERAFARAGVPMRVA 231 Query: 233 MSLPEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPL 276 + + E + +A L L L PL Sbjct: 232 LEIAGVEGVKEAVRAGMGIGFVSAMSMRHEDRALCLLSLSPEPL 275 >UniRef50_C2FUK4 Transcriptional regulator n=2 Tax=Sphingobacterium spiritivorum RepID=C2FUK4_9SPHI Length = 300 Score = 194 bits (495), Expect = 3e-48, Method: Composition-based stats. Identities = 54/315 (17%), Positives = 101/315 (32%), Gaps = 29/315 (9%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L +L +E KAA+R+ ++ +S+ + L LF + ++ TP Sbjct: 1 MELRHLHYFAILAEELHFGKAAERLFISQPPLSRQIKDLEEELAVILFERNNKRVNLTPA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQ-TPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + +++ + K F L S +L L K + +RYP Sbjct: 61 GAYFLKETQDILRLLDNAKIKARQIQDAVSGTFRLGYISSTPKALLARLLKMVKERYPHL 120 Query: 127 TIKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + L L A+ G++D+G L + L + C+ Sbjct: 121 HVCLYETSTQKQLTALENGKLDLGIVRTPI----------LSNQLCTRTLLKESFCLATT 170 Query: 186 KDHPALHQTWNLDTFLRYPHISICWEQS--DTWALDNVLQELGRERTIAMSLPEFEQSLF 243 D + L +++ E + + LG + + + L Sbjct: 171 PD--FNANSGKLSELA---YVTYSKEYAPEYYRQFVSYCHYLGFDPHVLHECNTMQSILE 225 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 + A L A P+ Q Q+ ALP + L R S +P Sbjct: 226 LVAS--GLGAALVPQSVQNQALHLQICFSALP-AVPIYTETVLAFD-------RESRHPA 275 Query: 304 IVWLRETIKNLYASM 318 + I Y + Sbjct: 276 LSAFTAIITEEYKAF 290 >UniRef50_B9QYV9 LysR substrate binding domain protein n=1 Tax=Labrenzia alexandrii DFL-11 RepID=B9QYV9_9RHOB Length = 303 Score = 194 bits (495), Expect = 3e-48, Method: Composition-based stats. Identities = 52/325 (16%), Positives = 107/325 (32%), Gaps = 29/325 (8%) Query: 1 MKKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPL 60 M+ + D L +M+ S AA++++++ SAV++ + KL LF + Sbjct: 1 MRIN---FDFGDLEAFLAVMETASFHLAAEQLHLSQSAVTRRIQKLEQVLGSKLFERTTR 57 Query: 61 GLSPTPLMVSMEQNLAEWMQMSNLLLDKPHH----QTPRGL-KFELAAESPLMMIMLNAL 115 + PT ++ E + + + +A L+ + Sbjct: 58 AVKPTLAAKRLQSRAEEMLDNAEETTLAMRDESVAFAHQKGAVVTIAMIPTLIAPLFLPG 117 Query: 116 SKQIYQRYPQATIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEV 174 + Q A I+L + D +A++ GE D G + SL +E Sbjct: 118 LSSMRQADETARIRLMDLSANDVAEAVSSGEADFGICS----------IGSLEANTHFEP 167 Query: 175 LFSDVPCVWLRKDHPA-LHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAM 233 F D + + +H + L I + +D+ + + Sbjct: 168 WFDDEIVLAIPIEHQLAAQDNVSWPDLLNEDLILPARGTGNRLLIDDAMAKGRISAQWTY 227 Query: 234 SLPEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLL 293 + ++ M + +A PR L LP P + P LL Sbjct: 228 EVGRSTTAMEMV--SGGVGIALLPRSAATSTFAQGLRFKKLPKPV-------VTRPIGLL 278 Query: 294 WHKRNSHNPKIVWLRETIKNLYASM 318 S P + ++++++ A++ Sbjct: 279 TRMGVSDTPVVSSVKDSLREYAANI 303 >UniRef50_Q13JN6 Transcriptional regulator, LysR family n=7 Tax=Burkholderiales RepID=Q13JN6_BURXL Length = 312 Score = 194 bits (495), Expect = 3e-48, Method: Composition-based stats. Identities = 47/308 (15%), Positives = 93/308 (30%), Gaps = 27/308 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +D+ L L + R +AA R+N++ +S+ LA L A L SP ++ T Sbjct: 26 IDIKPLRYFVTLAETRHFGRAAARLNLSQPPLSRQLAALEASVGVTLVERSPRSVTLTAA 85 Query: 68 MVSMEQNLAEWMQMSNLLL-DKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + + + K + ++ ++ +P+ Sbjct: 86 GERFYADAKAILTAVEQAVSNAQAAAQGEAGKLAIGFTMCAAYSVVPGYARVFGAAFPEV 145 Query: 127 TIKLRN-WDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + LR D + + G +D + + S+ CV L Sbjct: 146 ALNLREVVSNDLAEQVLAGHIDAAIMFPNVP----------DKGLATRTIVSEPLCVALS 195 Query: 186 KDHPALH-QTWNLDTFLRYPHISICWE--QSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 + HP + + P + E + + + G E I + + L Sbjct: 196 RSHPRARARRLKIAQLAGEPFVLASGEVAPTLRATILEHCRSGGFEPDIRFEVQLQQTVL 255 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 + + + +A P + QL + L + L W N NP Sbjct: 256 SLV--DEGVGVALVPASMRK-AQLAGVVFRPL--------VDAPLIEQVLAWSPAN-RNP 303 Query: 303 KIVWLRET 310 + E Sbjct: 304 CLARFLEL 311 >UniRef50_D1A8L0 Transcriptional regulator, LysR family n=2 Tax=Actinomycetales RepID=D1A8L0_THECD Length = 350 Score = 194 bits (495), Expect = 3e-48, Method: Composition-based stats. Identities = 42/345 (12%), Positives = 92/345 (26%), Gaps = 44/345 (12%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 + L L + + R T AA+ + V ++SK + L LF + ++ TP Sbjct: 1 MQLQQLAYFVAVAEIRHFTHAAEALRVAQPSLSKQIRALETELGASLFSRARGNITLTPA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 ++ + + + + L A L +L + ++ + YP Sbjct: 61 GEALLPLAKRILADVDTARLEVQELVGLRRGRVRLGATPSLCAGLLADVLRRFHDTYPGI 120 Query: 127 TIKLRN-WDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + + D + +TRG +D+ + ++ + + V Sbjct: 121 QLLVEEGGSRDLVRQLTRGALDLALVILPLAGDAP---------LETTAILREHLVVASP 171 Query: 186 K------------DHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIA 232 + ++ P + A ++ G E A Sbjct: 172 APRRNGSRPPAVRGALLPRRPYVRIEDLRDRPLVMFRPGYDLREATIGACRQAGFEPRFA 231 Query: 233 MSLPEFEQSLFMAAQPDNLLLATAPRYC---QYYNQLHQLPLVALPLPF----------- 278 + E + L L +A P + + L + P Sbjct: 232 VEGGEMDAVLRFVEA--GLGVAVVPSMVLAGRPGLRGTPLAIGDPPEESGGRGSAGAPGA 289 Query: 279 ----DESQQKKLEVPFTLLWHKRNSHNPKIVWLRETIKNLYASMA 319 L L K + + +++ A Sbjct: 290 GSSRRTEPVPGLLRTIALAHRKDVTLTHAARAFQRVLESFIREAA 334 >UniRef50_B5ZQW7 Transcriptional regulator, LysR family n=18 Tax=Proteobacteria RepID=B5ZQW7_RHILW Length = 302 Score = 194 bits (495), Expect = 3e-48, Method: Composition-based stats. Identities = 48/310 (15%), Positives = 105/310 (33%), Gaps = 19/310 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 L + + ++ SVT+AA+ ++++ S+V+++L +L LF P GL+ T Sbjct: 3 FTLRQVQYFVAVAEQGSVTRAAQNLSISQSSVTEALKELETDLGVALFERHPRGLAITHN 62 Query: 68 MVSMEQNLAEWMQMSNLLLDK-PHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 ++ + + + Q+ + S + +L+ L + + P Sbjct: 63 GHQFLRHATKILASVSDARTSFAGQQSALSGTLNIGVTSLVAGYVLSDLLARYRRACPGI 122 Query: 127 TIK-LRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + + + + GE+D+ + +A+ E+L + +WL Sbjct: 123 EVSAIEDNGGYLEHLLVGGELDVAVMVISNLRDR--------MALQAEILETSPYRLWLP 174 Query: 186 KDHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 HP + ++ R P I + + +L LG +A E + Sbjct: 175 MGHPLVSADIISVADIAREPLIMLTVD-EIEENTGKLLSALGARPHVAFRTRSVEAVRSL 233 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 A +A P L + + + V ++W K +S Sbjct: 234 VAT--GAGVALLPDLVYRPWSLEGDRIESRDV-----SGSLPVVQVGMVWRKGSSLPQAA 286 Query: 305 VWLRETIKNL 314 ++L Sbjct: 287 RDFVGIAESL 296 >UniRef50_B0TM59 Transcriptional regulator, LysR family n=2 Tax=Shewanella RepID=B0TM59_SHEHH Length = 308 Score = 194 bits (495), Expect = 3e-48, Method: Composition-based stats. Identities = 38/317 (11%), Positives = 98/317 (30%), Gaps = 23/317 (7%) Query: 6 TTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPT 65 + + + + + M +VT AA+ + ++ AVS+ L++L PLF+ + L T Sbjct: 5 SKIKIRQIEAFRCFMLSGTVTGAAELLYISQPAVSRLLSELEYRVGFPLFIRTHNKLEAT 64 Query: 66 PLMVSMEQNLAEWMQMSNLLLDKPHHQTP-RGLKFELAAESPLMMIMLNALSKQIYQRYP 124 P +++ N L + + + + +P Sbjct: 65 PEAKLFYKDVNRVFVGMNSLTSSADAIARNNQGRLRIGVMPICSNSFMPDVIAAFLSLHP 124 Query: 125 QATIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVW 183 +I+L + L+ + +DI + L V Sbjct: 125 NVSIELESASRIQLLEMVRSHRIDIAITTNVEADED---------EFSCRFLRRHRAVVL 175 Query: 184 LRKDHPALHQ-TWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 L + HP + + + +++ + +++ + +R I + E Sbjct: 176 LHEGHPLAQKSSLSPIDLKHERFMTLAYGSPFRTRVEDAFLKQSVKRNIILEAREQSTLF 235 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 + + + +A + + +V+ P E + ++ K Sbjct: 236 QLVRK--GVGIAILDPFVLHSGADG---IVSRPFE------PVTEWEYHVVQAKGIQTPR 284 Query: 303 KIVWLRETIKNLYASMA 319 + + + + S + Sbjct: 285 MVNAFLDILFEYFESPS 301 >UniRef50_B5ZKB2 Transcriptional regulator, LysR family n=2 Tax=Gluconacetobacter diazotrophicus PAl 5 RepID=B5ZKB2_GLUDA Length = 317 Score = 194 bits (495), Expect = 3e-48, Method: Composition-based stats. Identities = 81/320 (25%), Positives = 133/320 (41%), Gaps = 21/320 (6%) Query: 1 MKKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPL 60 M DLNLL + +L++E SVT AA+R+ V+ + +S++L++LR F D + V S Sbjct: 1 MAHVAHGYDLNLLQAMNVLVEESSVTGAAERLQVSAATMSRTLSRLRETFHDAILVQSGR 60 Query: 61 GLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQT--PRGLKFELAAESPLMMIMLNALSKQ 118 + PTP + M+ +++ + + L H F + A ++ AL + Sbjct: 61 HMVPTPRALQMQPRVSQILSAISDLYRPRHALDFTGLTPTFRIRAADVVIGSYAEALLRA 120 Query: 119 IYQRYPQATIKLR-NWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFS 177 + P T+ + D D + +G +D+ + L I + LF Sbjct: 121 LRADCPDTTLIFTAESNSDDSDFLRQGGIDLYIGAT----------ALLRPEIMRQTLFE 170 Query: 178 DVPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQEL-GRERTIAMSLP 236 +R HP L + Y HI++ +D VL + G ERT+A+ L Sbjct: 171 SRFRGVVRAGHPILLGKITPQALVAYEHIAVSRRGRRRGPIDEVLADQYGLERTVALLLT 230 Query: 237 EFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHK 296 F +L +Q D L+ AP L +L L PLP D V WH Sbjct: 231 SFYAALQGLSQTD--LILPAPDILTDAAMLDRLGLYGFPLPLDL-----EPVTIFQAWHP 283 Query: 297 RNSHNPKIVWLRETIKNLYA 316 R+ + WLR T+ + + Sbjct: 284 RHDTDQVHQWLRRTVLRVMS 303 >UniRef50_A8H6N4 Transcriptional regulator, LysR family n=3 Tax=Shewanella RepID=A8H6N4_SHEPA Length = 305 Score = 194 bits (495), Expect = 3e-48, Method: Composition-based stats. Identities = 54/322 (16%), Positives = 118/322 (36%), Gaps = 26/322 (8%) Query: 1 MKKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPL 60 M + + DLNL + + S ++AA+ +++T S+VS ++ +L+ + LF+ Sbjct: 1 MSQQ-KSFDLNLFRIFTAVYRTSSFSRAAEELDLTQSSVSNAITRLKLAVGEELFIRVGR 59 Query: 61 GLSPTPLMVSMEQNLAEWMQMSNLLLD--KPHHQTPRGLKFELAAESPLMMIMLNALSKQ 118 G+ PT +++ Q LA + + + F + A +++L + +Q Sbjct: 60 GVKPTASAMNLYQQLASPVSEIEQVASSFELFDAKRSERTFYVYASES-AILLLQGIVEQ 118 Query: 119 IYQRYPQATIKLRNWD--YDSLDA-ITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVL 175 + + R + L + +VD+ S + + Sbjct: 119 FLEEL-SINLVFREPPLIEEELQMDLQLEKVDLALDIWLPESSS----------FKSQKV 167 Query: 176 FSDVPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSL 235 D RK HP + + + HI + + D + +++ R + Sbjct: 168 MQDKLVCVARKGHPRISGAITQEQYFNEKHIIFKMRRDNLSVADLLTKQVLPARKMHSEQ 227 Query: 236 PEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWH 295 + +A++ D L + + Y Y QL L + LP + + + ++W Sbjct: 228 SSILSMMALASKSDALAI-VSKSYTDEYAQLFGLQVFELPFAAE-------PIEYYMVWS 279 Query: 296 KRNSHNPKIVWLRETIKNLYAS 317 + N +WLR+ + Sbjct: 280 HKLQQNRANIWLRDLLNQAITR 301 >UniRef50_B5WAN2 Transcriptional regulator, LysR family n=1 Tax=Burkholderia sp. H160 RepID=B5WAN2_9BURK Length = 310 Score = 194 bits (495), Expect = 3e-48, Method: Composition-based stats. Identities = 70/318 (22%), Positives = 133/318 (41%), Gaps = 21/318 (6%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 + D+NLL+ L L+ RSVT+A++R+++ SA S +L +LR F D L + + Sbjct: 1 MRLGHFDMNLLVALDALLDTRSVTRASERLHIGASATSSALGRLREHFGDDLLMQVGRRM 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQIY 120 TPL S+ Q + E + + P F + A L ++L + +++ Sbjct: 61 ELTPLARSLAQPVREILLSVQSTVVTRLEFDPAQARRNFLIRASDYLTTVLLINVVQRLQ 120 Query: 121 QRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 + P T+ + N D + + RGEVD S S + LF D Sbjct: 121 REAPGITLHIANMSDDVPERLDRGEVDFVIYPSASVNASHP----------SQALFEDSF 170 Query: 181 CVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVL-QELGRERTIAMSLPEFE 239 + + + T +L+ +L+ H++ + S + + ++V +LG +R+I ++ F Sbjct: 171 SCVVWSGNELIGDTLSLEQYLQLGHVAATFGDSRSVSFESVFINKLGLKRSIEVTTTNFN 230 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 + + R + Y + L L+ LP+ + + WH N+ Sbjct: 231 TLPQLVIGTMRIA-TVHTRLARIYARYLPLRLLPLPMDIPPLVEV-------MQWHAINN 282 Query: 300 HNPKIVWLRETIKNLYAS 317 +P W+R ++ S Sbjct: 283 SDPAHAWMRSVLQEQAQS 300 >UniRef50_B7JB31 Rubisco operon transcriptional regulator n=5 Tax=Acidithiobacillus RepID=B7JB31_ACIF2 Length = 332 Score = 194 bits (494), Expect = 3e-48, Method: Composition-based stats. Identities = 43/317 (13%), Positives = 91/317 (28%), Gaps = 22/317 (6%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 SI L+ L + + S +AA+ +++TP A+S + +L PLF + Sbjct: 25 MSIRHATLHQLKIFAAVARHMSFARAAEELHLTPPALSIQVRQLAEAVGQPLFNQIGKKI 84 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNALSKQIYQ 121 TP ++ + + + ++A S + + Sbjct: 85 YLTPAGEALTSACHDVLDRLEYFTQEIAALQGLEKGSLKVATLST-AKYFIPRIMGGFCT 143 Query: 122 RYPQATIKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 +P L + + L+ + R + D+ G+ + + E + Sbjct: 144 EHPGVATALFIGNREALLERLARNQDDLYILGQPPE----------HINVVAEAFADNPL 193 Query: 181 CVWLRKDHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFE 239 V R DHP + P I A + ++ G M E Sbjct: 194 VVVSRSDHPLASEKDLEPSRLRDAPFILREPGSGTRLAAEKFFEQHGVVLRTRMEFGSNE 253 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 A + + +A + L P + + ++ Sbjct: 254 AVKQTVAGGLGIAVLSASTIHAELASGELVILDVRGFPLE--------RKWYAVYPAGKL 305 Query: 300 HNPKIVWLRETIKNLYA 316 +P + + + A Sbjct: 306 LSPIVRAFMGCLFAVSA 322 >UniRef50_C7JCS7 Transcriptional regulator LysR n=11 Tax=Proteobacteria RepID=C7JCS7_ACEP3 Length = 313 Score = 194 bits (494), Expect = 3e-48, Method: Composition-based stats. Identities = 40/315 (12%), Positives = 93/315 (29%), Gaps = 26/315 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +D+ L + + S+T AA+ + + +S+ + +L LF G+ T + Sbjct: 1 MDIRHLRYFVTVAEHGSITHAAEALGIEQPPLSQQIRQLERNLGVTLFERQTRGMKLTEI 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQT-PRGLKFELAAESPL-MMIMLNALSKQIYQRYPQ 125 + + + L + + ++ ++ ++ + P Sbjct: 61 GEVLLPRARTILDLQAQFLSTAEGLARGERGHIRVGLAGAVPLLPVIPLTIRRFREMAPD 120 Query: 126 ATIKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 T+ L + +L A+ VDI P + L + + L Sbjct: 121 VTLSLEESNTPALCAALHEPSVDIAIIRPPFTD---------PSRLSVFHLLDEPTVIAL 171 Query: 185 RKDHPALHQT-WNLDTFLRYPHISICW--EQSDTWALDNVLQELGRERTIAMSLPEFEQS 241 + H + +LD P I A+ + Q G T+ P+ + Sbjct: 172 PRGHRLAKEPIISLDMVADDPLIIFPRELGPGFHDAILSAYQLAGVTPTMGQQAPQIAGT 231 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 + + A L ++ PR + + F + + + Sbjct: 232 VPLVAA--GLGVSVVPRSLSQIHAGG--------VTFHAISEPAPRATLAVAIRTGQNM- 280 Query: 302 PKIVWLRETIKNLYA 316 P + ++ Sbjct: 281 PLVTRFVTVLRTACR 295 >UniRef50_A3NGA2 Transcriptional regulator n=70 Tax=Proteobacteria RepID=A3NGA2_BURP6 Length = 339 Score = 194 bits (494), Expect = 4e-48, Method: Composition-based stats. Identities = 46/312 (14%), Positives = 107/312 (34%), Gaps = 19/312 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 L L L + +++AA ++ ++ SAV+ ++ +L LFV + G++ T Sbjct: 38 LTLRQLKYFVATAELGQISQAAIQLTISQSAVTSAIRELEDSLGTQLFVRTASGVALTNT 97 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQAT 127 + + + P+ ++ LAA ++ L +++ +YP+ T Sbjct: 98 GRRFLNQAYTILSSVDEAMRIPNLESTLTGTLALAASYTVLGYFLPHHLMRLHTQYPRLT 157 Query: 128 IKLRNWDYDSLDA-ITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRK 186 I+L + +S++ + G D+ + + E + +W+ Sbjct: 158 IQLHELNRESIEEGLIAGRYDMAV---------LLTSNVSNPELVLEPVIHSARRLWVGA 208 Query: 187 DHPALHQ-TWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMA 245 HP L + + P + + +++ AL E + + E M Sbjct: 209 HHPLLRRESVTFADVAPEPFVMLTVDEAAYTAL-RYWNETPYRPNVILRTSSVEAVRSMV 267 Query: 246 AQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIV 305 A + +A L + + + L W + +P + Sbjct: 268 A--NGSGVAILSDMVYRPWSLEGRRI-----ETVLLRDPVPPMSVGLAWRRNAEFSPAMH 320 Query: 306 WLRETIKNLYAS 317 +RE ++ + Sbjct: 321 AVREYFRHTFME 332 >UniRef50_B7WRI3 Transcriptional regulator, LysR family n=1 Tax=Comamonas testosteroni KF-1 RepID=B7WRI3_COMTE Length = 307 Score = 194 bits (494), Expect = 4e-48, Method: Composition-based stats. Identities = 47/262 (17%), Positives = 85/262 (32%), Gaps = 16/262 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +DL + L + S +A++R+++ +S S+ KL A LF P G++ T Sbjct: 2 MDLKRIRNFVTLAEAGSFRRASERLHLAQPPLSVSIQKLEAELGTRLFDRGPAGVTLTVA 61 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQ-TPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 S+ + + ++ H + G + ML L +YP Sbjct: 62 GESVLREAKRLLFFERQVITAAHDAISGIGGTLRIGFVGTTTFGMLQRLLPAYRAQYPAV 121 Query: 127 TIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 +KL+ ++ + G +D+G + L S L + L Sbjct: 122 ELKLQEAPSVSIVEQLEHGSLDLGLVRAPVMAATSTTLVS---------LERESLIAALP 172 Query: 186 KDHPALHQT-WNLDTFLRYPHISICWE--QSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 KDH T L+ + S + Q G I + + L Sbjct: 173 KDHFLAKHTAIRLNDLSGEAFLMYAEGAATSLRSLVMAACQRAGFIPRITQEATQVQTIL 232 Query: 243 FMAAQPDNLLLATAPRYCQYYN 264 + L +A P + Y Sbjct: 233 ALVES--GLGVALVPSVMRRYA 252 >UniRef50_A7IDL3 Transcriptional regulator, LysR family n=2 Tax=Xanthobacteraceae RepID=A7IDL3_XANP2 Length = 308 Score = 194 bits (494), Expect = 4e-48, Method: Composition-based stats. Identities = 39/280 (13%), Positives = 81/280 (28%), Gaps = 19/280 (6%) Query: 1 MKKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPL 60 M + DL + LL +E ++AA+R ++T A+S+ + L PL + Sbjct: 8 MNVPMR-FDLRHVRAFVLLSEELHFSRAAQRAHMTQPAMSRLIRDLEQDVGVPLIARTTR 66 Query: 61 GLSPTPLMVSMEQNLAEWMQMSNLLL-DKPHHQTPRGLKFELAAESPLMMIMLNALSKQI 119 + T + + ++ + + + + + L Sbjct: 67 SVELTEAGKAFLADGRAALERLERAVTNARRTASGEVGLLRIGYMDFAINGRLPEFLSAF 126 Query: 120 YQRYPQATIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSD 178 + P+ +++ +A+ +DIGF S E + Sbjct: 127 SRYRPEIRLEISFIPTFKQQEALLAERIDIGFMIGPFEEPSMESYTFDDN---------- 176 Query: 179 VPCVWLRKDHPALH-QTWNLDTFLRYPHISICW--EQSDTWALDNVLQELGRERTIAMSL 235 L HP + +T L P + + A ++ G I Sbjct: 177 RYVALLPITHPLSNVRTLRLSDLADQPFVLGSGENWGAFRNAFFSICHRAGFTPRITQEA 236 Query: 236 PEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALP 275 E + A + + C Q + + L Sbjct: 237 SSSEGIFGLVAAGAGVSV---YASCVRNLQRRGIVIRDLD 273 >UniRef50_A6CVD4 Transcriptional regulator, LysR family protein n=1 Tax=Vibrio shilonii AK1 RepID=A6CVD4_9VIBR Length = 325 Score = 194 bits (494), Expect = 4e-48, Method: Composition-based stats. Identities = 71/322 (22%), Positives = 136/322 (42%), Gaps = 22/322 (6%) Query: 1 MKKS-ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSP 59 M K LDLNLL ++L +E+++ KAA+R+ V+ AVS+SL KLR FDDPLFV Sbjct: 1 MPKDRFANLDLNLLRVFKVLYEEKNMRKAAERLYVSQPAVSQSLQKLRHQFDDPLFVKVK 60 Query: 60 LGLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSK 117 GL+PTP + +L + +++ P +A S + + L + Sbjct: 61 SGLAPTPFSEQLSSSLLPLLYDIENVVNDSDVFDPAQLDQDITIALSSSFVFSISGELYR 120 Query: 118 QIYQRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFS 177 + P I + +W+ ++ AI +GE+ +G + + ++ + Sbjct: 121 YFREHAPGLRIHIASWNDQTVTAIEKGEILLGINAELTDSYPF---------MEKRTIGE 171 Query: 178 DVPCVWLRKDHPALHQTWNLDTFLRYPH--ISICWEQSDTWALDNVLQELGRERTIAMSL 235 C+ +RK+HP + +++ +YP + + T + + LG + S Sbjct: 172 INACLLVRKEHPITKKKVTVESMSKYPLARLIVSNYSKYTSPTVEIFKRLGYPLEVGFSS 231 Query: 236 PEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWH 295 + + Q D + T + + LV L + + + + H Sbjct: 232 EYPVALIDVVQQSDMFMGTT-----NCFPIHNYPNLVMLSPDQVLPEAQYPALSYF---H 283 Query: 296 KRNSHNPKIVWLRETIKNLYAS 317 R+ ++ + WL E+I +++ Sbjct: 284 SRHQNSALVNWLNESIIHIFQQ 305 >UniRef50_C4ZIH4 Transcriptional regulator, LysR family n=1 Tax=Thauera sp. MZ1T RepID=C4ZIH4_THASP Length = 318 Score = 194 bits (494), Expect = 4e-48, Method: Composition-based stats. Identities = 40/313 (12%), Positives = 90/313 (28%), Gaps = 20/313 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 + +N L + + SV AA + V+ +AVS++L +L PLF G + Sbjct: 1 MKINQLRYFLAVADKGSVRAAATALGVSAAAVSQALRELETAMGTPLFTRESHGAVLSYA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + + + + + +L + + P Sbjct: 61 GRQFLIHARLILGQVSRAEAEIAQIRGATGGSLTIGVTPWVAQSILPHALARFHALRPDV 120 Query: 127 TIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRK 186 + + + G +D+ + + LF V R Sbjct: 121 HLDVTEAVGTVHPLLRDGTLDLVIAIPPPRQEASI--------FYTRELFRCDLAVVGRL 172 Query: 187 DHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGR--ERTIAMSLPEFEQSLFM 244 HP T +L+ + + L N+L G ++ M Sbjct: 173 GHPFASAT-SLEELVDQDWVLTMLGAGQDEPLVNLLAPHGIAPPPHRVHYARSALVAISM 231 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 + L + P L + + ALP+ E+ ++ + ++ + Sbjct: 232 LEVGNMLTICPWPLL---ETPLLRGRVQALPIRNPLP-----EMHTAIIVRRNDTLSAAG 283 Query: 305 VWLRETIKNLYAS 317 + ++ + Sbjct: 284 QLFIDCFEDATRT 296 >UniRef50_B5G8L5 Transcriptional regulator n=3 Tax=Actinomycetales RepID=B5G8L5_9ACTO Length = 301 Score = 194 bits (494), Expect = 4e-48, Method: Composition-based stats. Identities = 42/314 (13%), Positives = 95/314 (30%), Gaps = 18/314 (5%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++ L L+ + S + AA+ + T AVS+ + L PL V + + T Sbjct: 2 IEARHLRVLRAVATTGSFSAAARTLGCTQPAVSQQMKALEGAAGTPLLVRTGREMRLTEA 61 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNALSKQIYQRYPQA 126 ++ ++ + + ++ + L + ++ + + + +P Sbjct: 62 GEALSRHASGILAGLTAAEEEVAAIAGLRAGRVRLVSFPSGSSSLVPSALAALRRDHPGT 121 Query: 127 TIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + L S++ + G+ DI + R + L D + Sbjct: 122 RVSLEEAEPPRSVELLREGDFDIALAFRYGTEADDSAREW--EGLVVRPLLRDRLVGLVP 179 Query: 186 KDHPALHQ--TWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 + H + + F R P I+ C L V E G I + ++ Sbjct: 180 EGHRLDGRAGPVGIAEFAREPWIAGCPRC--RTQLVKVCAEAGFTPRIDFATDDYPAVHA 237 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 + A L +A P + + + L + L + P Sbjct: 238 LVAA--GLGVAVLPALALESVRPEGVRTLTL--------TPSVRREIVALTLPDLATVPT 287 Query: 304 IVWLRETIKNLYAS 317 + + ++ Sbjct: 288 VAATLDRLERAARR 301 >UniRef50_A0LA88 Transcriptional regulator, LysR family n=1 Tax=Magnetococcus sp. MC-1 RepID=A0LA88_MAGSM Length = 308 Score = 194 bits (494), Expect = 4e-48, Method: Composition-based stats. Identities = 49/324 (15%), Positives = 99/324 (30%), Gaps = 42/324 (12%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++LN L + + + R +AAK +V+ +S + KL LF S + PT Sbjct: 1 MNLNQLRFIDAVARTRHFGRAAKACHVSQPTLSIGIRKLEEELGVILFERSRSEVRPTEN 60 Query: 68 MVSMEQNLAEWMQMSNLLLD-KPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + ++ +N + + + P L + + +L L P Sbjct: 61 SLEILTQARLIVESANHIKELGKSRRDPLQGPLRLGIINTIGPYLLPTLIPHCQAAAPGM 120 Query: 127 TIKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 T+ + D + + G +D+ RE + L+ + V + Sbjct: 121 TLLIEEEHTDTLIAHLKAGTLDLLLIARECAEP----------GLAVTPLYREPFRVTVP 170 Query: 186 KDHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFE----- 239 +HP + + P + + + N+ + P+ + Sbjct: 171 SNHPWANRSSIAGHELDQQPLLLLRRGHCLRDQIINLC--------PTYNTPDSDPNGLS 222 Query: 240 ---------QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPF 290 M A + P HQ L +P Sbjct: 223 SVLESSSLETIRHMVAG--GAGITVLPSTVADSPFSHQDTLRHIPFAEPAPY-----RTV 275 Query: 291 TLLWHKRNSHNPKIVWLRETIKNL 314 +L+W + S P + L +KN+ Sbjct: 276 SLVWRRTFSRQPAVALLASLVKNM 299 >UniRef50_A3U1I2 Regulatory protein, LysR:LysR, substrate-binding n=1 Tax=Oceanicola batsensis HTCC2597 RepID=A3U1I2_9RHOB Length = 313 Score = 194 bits (494), Expect = 4e-48, Method: Composition-based stats. Identities = 48/318 (15%), Positives = 93/318 (29%), Gaps = 27/318 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +DL L L+ + S++KAA V A+S + KL A F PLFV + G+ PT Sbjct: 1 MDLKQLSYFMLIHEHGSISKAASAAGVVQPALSSQIRKLEAEFGVPLFVRTHRGVVPTSA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQ---TPRGLKFELAAESPLMMIMLNALSKQIYQRYP 124 + Q A G + ++ L + + L +P Sbjct: 61 GDRIYQLAASITANIADAKQDLSALVEADQVGGRIKVGFPPSLARGIFSPLMTSFTNDFP 120 Query: 125 QATIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVW 183 + + + + G +D + +++D + Sbjct: 121 NVKVTMMEAFSGTLTEWVIDGRIDFAIGAVPLDVA----------GLRQRKIYTDNIVLI 170 Query: 184 LRKDHPALHQTW---NLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQ 240 P + LD I S + L+E + + Sbjct: 171 --SGQPIAGKQLEPCRLDNIPGLKLILPSEAHSFGAVVRKYLEEGRIVADSTVEVDGASG 228 Query: 241 SLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 + +A D L +C + L + + P+ E + LL+ ++ Sbjct: 229 GIALARSTDWAGLCP---FCAVHGDLRRNQIYVNPIAAPELK-----WDLYLLYDEKRPL 280 Query: 301 NPKIVWLRETIKNLYASM 318 ++ A + Sbjct: 281 TAAAHRFIAMVERELAEL 298 >UniRef50_D1ABG1 Transcriptional regulator, MarR family n=2 Tax=Streptosporangineae RepID=D1ABG1_THECD Length = 327 Score = 194 bits (494), Expect = 4e-48, Method: Composition-based stats. Identities = 51/310 (16%), Positives = 101/310 (32%), Gaps = 19/310 (6%) Query: 13 LLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSME 72 L L + + S+T AA++++ TPSA+S+ LAKL PL V + G PT + Sbjct: 8 LRALVAVSRAGSITAAAEQMSFTPSALSQQLAKLEQEGGCPLLVRTASGAHPTEAGRVLL 67 Query: 73 QNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNALSKQIYQRYPQATIKLR 131 ++ + + R + + +L + P + L Sbjct: 68 RHAERVLGELRDAEEAVRTAAGRQPQHLSVGTFASAGKTLLPEALAAFRRVNPGVRLSLL 127 Query: 132 NW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPA 190 + D +T ++D+ + R + E+L +D V L +HP Sbjct: 128 DLEPPRGYDLVTSRDLDLLVTHRYPGGSLPAA-----PGLRRELLLTDPLLVVLPPEHPL 182 Query: 191 LHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQPD 249 + + IS + L+ V + G A ++E +L + A Sbjct: 183 ADRPAVSFADLADEEWISGEPGVHNRVCLETVAAQTGVPVRTAYETHDYEVTLALIAA-- 240 Query: 250 NLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWLRE 309 + +A P + L + L ++ +R L Sbjct: 241 GIGVALVPSTALRHTASPAFAARPL-------RGLSLAREIYIVHRRRPPRLAAD--LLG 291 Query: 310 TIKNLYASMA 319 ++ ++ Sbjct: 292 ILQRFAGELS 301 >UniRef50_A8H9L3 Transcriptional regulator, LysR family n=5 Tax=Shewanella RepID=A8H9L3_SHEPA Length = 310 Score = 194 bits (494), Expect = 4e-48, Method: Composition-based stats. Identities = 77/312 (24%), Positives = 125/312 (40%), Gaps = 21/312 (6%) Query: 9 DLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLM 68 DL+LL+ LQ+L++ERSVT+AAKR++++ SA S+ LA+LR DDPLF L PT Sbjct: 10 DLSLLIALQILVEERSVTQAAKRLHLSQSATSRILARLRDMLDDPLFSRVGQQLVPTSFA 69 Query: 69 VSMEQNLAEWMQMSNLLLDK-PHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQAT 127 + Q L + LL +F +A M ++ + IY++ PQ Sbjct: 70 LECYQQLRQPTGQLIELLTPKAFVPQECQQQFSIAVTDYAMQALIPFILPIIYKKAPQIR 129 Query: 128 IKLRNWDYDSLDA-ITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRK 186 +++ L A ++ D+ + L L Sbjct: 130 LEIVPVQQKELQAQLSVKGADMAVCRAIGQTG----------NLQQTFLGKVGVSCLLSP 179 Query: 187 DHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAA 246 +HP + LD +L YPH +I LD+ + RT + P + +L + Sbjct: 180 NHPLANSDITLDDYLHYPHATIAISDGVKALLDDAISLY-PARTELLRTPHLDTALAL-Q 237 Query: 247 QPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVW 306 + L++ + Q H+L + LP + + L WH R + W Sbjct: 238 SVNPLIITLPEGMAEIAAQRHKLKVKPLPFKL-------QSLDYKLFWHSRCDQDKAQKW 290 Query: 307 LRETIKNLYASM 318 LRE I + Sbjct: 291 LREEIATAIQEL 302 >UniRef50_A6WFB8 Transcriptional regulator, LysR family n=1 Tax=Kineococcus radiotolerans SRS30216 RepID=A6WFB8_KINRD Length = 307 Score = 194 bits (494), Expect = 4e-48, Method: Composition-based stats. Identities = 44/313 (14%), Positives = 91/313 (29%), Gaps = 26/313 (8%) Query: 7 TLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTP 66 ++L L +++ +++ AA+R+ S VS + L LFV + PT Sbjct: 4 RVELRQLEVFLAVVEAGTISAAARRLGTAQSVVSTVVRALEEDLGAGLFVRTSRRAVPTD 63 Query: 67 LMVSMEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQIYQRYPQ 125 ++ + + + + + + L L ++ +P+ Sbjct: 64 AGRALVPEARRLLAGVSQARAAVRGAEEGPTGPVAVGVVTTMHPVDLPRLLQRFTAEHPR 123 Query: 126 ATIKLR---NWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCV 182 ++ +R + L A+ GE+D F P L L + Sbjct: 124 VSVSMRVFADGSRGLLRALVEGELDAAFLSWPFRPPGAVAL---------RPLVRAPLRL 174 Query: 183 WLRKDHPALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQS 241 L HP L I + +D V + G R + + +P+ Sbjct: 175 LLPAGHPLASPGPVELADLAGERWIDGPPGFGNRLQVDAVFERAGARRHVVLEVPDVSTF 234 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 A L A P V ++ +L + + Sbjct: 235 PRYVAA--GLGPAFVP----------GSVPVPPGCHEQAVTGEQPGWTLSLATARPSPER 282 Query: 302 PKIVWLRETIKNL 314 P + ++ + Sbjct: 283 PARRAVTAFVEAV 295 >UniRef50_P20667 HTH-type transcriptional regulator catR n=15 Tax=Bacteria RepID=CATR_PSEPU Length = 289 Score = 194 bits (494), Expect = 4e-48, Method: Composition-based stats. Identities = 40/264 (15%), Positives = 86/264 (32%), Gaps = 19/264 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L ++L + + T+AA+ +++ +S+ +++L L V L T Sbjct: 1 MELRHLRYFKVLAETLNFTRAAELLHIAQPPLSRQISQLEDQLGTLLVVRE-RPLRLTEA 59 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRGLK-FELAAESPLMMIMLNALSKQIYQRYPQA 126 + + + D + + + +L L +++ Q + Sbjct: 60 GRFFYEQSCTVL-QLQNISDNTRRIGQGQRQWLGIGFAPSTLYKVLPELIRELRQDS-EL 117 Query: 127 TIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + L ++A+ G +DI F + AI +VL D L Sbjct: 118 ELGLNEMTTLQQVEALKSGRIDIAFGR----------IRIDDPAIHQQVLCEDPLVAVLP 167 Query: 186 KDHPALHQTWNLDTFLRYPHISIC--WEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 KDHP L I S + + G ++ E + ++ Sbjct: 168 KDHPLASSPLTLAQLAGEAFILYPANPRPSYADHVLALFAHHGMSIHVSQWANELQTAIG 227 Query: 244 MAAQPDNLLLATAPRYCQYYNQLH 267 + A + + P Q ++ Sbjct: 228 LVA--VGVGVTLVPASVQQQHRTD 249 >UniRef50_UPI0001B4E379 LysR family transcriptional regulator n=1 Tax=Streptomyces griseoflavus Tu4000 RepID=UPI0001B4E379 Length = 313 Score = 193 bits (493), Expect = 4e-48, Method: Composition-based stats. Identities = 42/307 (13%), Positives = 86/307 (28%), Gaps = 23/307 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +++ L ++ E T AA+ + SA+S S+ L LF + + T Sbjct: 1 MEIRQLRHFMAVVTEGGFTAAARSELIVQSALSTSIRNLERELGADLFDRTGRRVVLTEA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 ++ + + + + + L + L ++ + Sbjct: 61 GRALLPQARALLAGARSAREAVAAVAGLHTGRVAIGTIQTLTCVDLPGELAVFHREFSGV 120 Query: 127 TIKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + +R+ D L A+ GE+D+ LP + + + + Sbjct: 121 QVSVRDATVDELTAALRAGELDLA--------YLAPDARELPEGLTVHATWHEELVLITA 172 Query: 186 KDHPALHQTWNL-DTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 HP L P + A+ + G R I + + + + Sbjct: 173 PGHPLAAAGRTLISDLAEEPFVDFRAGTGLETAVRRLAAHCGLRRRITCDVTQAGLLVEL 232 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 + +A PR LP +Q L NP Sbjct: 233 VRA--GIGVAFVPRPIGERAG----------LPCVTVRQPDPGRTVVLAGRGPRPRNPAA 280 Query: 305 VWLRETI 311 L + + Sbjct: 281 AALLDRL 287 >UniRef50_Q7WMW6 Putative LysR-family transcriptional regulator n=3 Tax=Bordetella RepID=Q7WMW6_BORBR Length = 303 Score = 193 bits (493), Expect = 4e-48, Method: Composition-based stats. Identities = 45/275 (16%), Positives = 92/275 (33%), Gaps = 18/275 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +DL L +L + + +AA+R+++ +S ++ KL LF P LS T Sbjct: 1 MDLRQLQQFVVLSETLNFHRAAERLHMAQPPLSTAIRKLEDELGIVLFDRKPRSLSLTVA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQ-TPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 +M ++ + + L + + + + +L + RYP+ Sbjct: 61 GAAMLKHARRTLSNVDELQRCAREYVSGDQGRIVVGFSNTASNAVLPRILHSFQARYPRV 120 Query: 127 TIKLRN-WDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + L ++ + + VD+ + L D + + Sbjct: 121 ELVLHESTTHELVSELAAHTVDVALLRTPLFDA---------CDAELIDLEQDHFILAVP 171 Query: 186 KDHPALHQTW-NLDTFLRYPHISICWE--QSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 DHP Q+ L I+ E + + E G + + + ++ Sbjct: 172 ADHPLAQQSCARLADLDGQRFIAFSREKVPAMHAIISLAFGEAGVTPKVVQQIVQVPTAI 231 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQ--LPLVALP 275 +A + +A P Y + LP+V LP Sbjct: 232 ALAES--GIGMALVPSAAARYLRTGARLLPVVDLP 264 >UniRef50_C6DI39 Transcriptional regulator, LysR family n=1 Tax=Pectobacterium carotovorum subsp. carotovorum PC1 RepID=C6DI39_PECCP Length = 308 Score = 193 bits (493), Expect = 4e-48, Method: Composition-based stats. Identities = 43/314 (13%), Positives = 97/314 (30%), Gaps = 30/314 (9%) Query: 5 ITTLDLN---LLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLG 61 ++ +D L + +E +AA R+ ++ +++ + L LF S G Sbjct: 1 MSKIDYRLIKQLYLFLAVAEEEHFGRAAARLGMSQPPLTEQIKILEQSLKLTLFERSRRG 60 Query: 62 LSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNALSKQIY 120 + +P ++ + ++ L + A + M ++ Sbjct: 61 TTLSPAGKAILPQVKRFVDHMASLEKMVKEVAQGKVGVIHIGAITSAMFDVVPEFLNYFK 120 Query: 121 QRYPQATIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 YP T+ + +++ ++ G++D+ F + + + L D+ Sbjct: 121 HHYPDVTVFVNEIDSAEAISSLLSGKLDMAFVR---------VEGDIGQTLKSIPLTEDL 171 Query: 180 PCVWLRKDHPAL-HQTWNLDTFLRYPHISICWE--QSDTWALDNVLQELGRERTIAMSLP 236 V L +HP + L + + L + +E G I + Sbjct: 172 LGVALPVEHPMSCNNEIRLGDLKDEAFVMSSRRVNPTYFDILTSACRENGFNPRILYEVR 231 Query: 237 EFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHK 296 + A P + + L+ L ++ V L+W+ Sbjct: 232 SVTAQIAYV--SCGQGAALVPLSMSRF-IPGNVRLIPL-------KESIKIVTAALVWNP 281 Query: 297 RNSHNP---KIVWL 307 N H + WL Sbjct: 282 GNGHPLVEYGVKWL 295 >UniRef50_A5FXN6 Transcriptional regulator, LysR family n=6 Tax=Alphaproteobacteria RepID=A5FXN6_ACICJ Length = 306 Score = 193 bits (493), Expect = 4e-48, Method: Composition-based stats. Identities = 45/302 (14%), Positives = 92/302 (30%), Gaps = 24/302 (7%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 T ++L L + + S T+AA+R+ ++ +S+ + L L S + Sbjct: 1 MDRTGMELRHLRYFVAVAETLSFTEAARRLAISQPPLSQQIRDLELEIGTTLIARSSRNV 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQ-TPRGLKFELAAESPLMMIMLNALSKQIYQ 121 S TP + + + + D+ R ++ +++ L L Sbjct: 61 SLTPAGAAFLTRARQILAEAVRARDEARVIGAGRSGTLDIGMTGAVLLGGLGGLVAAFQI 120 Query: 122 RYPQATIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 P ++L + A+ G +D+ F + + E + + Sbjct: 121 FAPGVQVRLHEMPPGEQEAALGAGRLDLCFLRTPGADPA----------LRVEPAWHEGV 170 Query: 181 CVWLRKDHPAL-HQTWNLDTFLRYPHISICW-EQSDTWALDNVLQELGRERTIAMSLPEF 238 L +DHP + L P + + L E G I + E Sbjct: 171 SAVLPRDHPLAVRRRLALADLRDEPFVFFRRADSRFADHLWTCCIEAGFAPRIVQEVVEA 230 Query: 239 EQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRN 298 + + A D +A P + L F +L++ + + Sbjct: 231 HAVMALVA--DGFGIALLPDSARRLAPSG--------LGFRPLAGNPARADVSLVYPREH 280 Query: 299 SH 300 S Sbjct: 281 SA 282 >UniRef50_B2JVL8 Transcriptional regulator, LysR family n=1 Tax=Burkholderia phymatum STM815 RepID=B2JVL8_BURP8 Length = 307 Score = 193 bits (493), Expect = 5e-48, Method: Composition-based stats. Identities = 41/316 (12%), Positives = 93/316 (29%), Gaps = 21/316 (6%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 + L L L + + S ++AA+ +++T VS L +L PLF + Sbjct: 1 MLHLTLRQLRVFEASARHLSFSRAAQELHLTQPGVSSQLKQLETSIGMPLFEQVGRRVFL 60 Query: 65 TPLMVSMEQNLAEWMQMSNLLLDKPHHQ-TPRGLKFELAAESPLMMIMLNALSKQIYQRY 123 T + + Q ++L + K +++ S + L + + + Sbjct: 61 TAAGKELYSHTRLLQQQLSVLETSLDQLRDMKQGKLKVSLVSGTANPLALQLIAKFTRAF 120 Query: 124 PQATIKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCV 182 P + L + + L+ + E D+ G + + + + Sbjct: 121 PGVRVSLSVGNRECVLNELASNETDLAIMGLPPEG----------QGLAAVRVARNPLVM 170 Query: 183 WLRKDHPALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQS 241 DH + + LD R + A++ E M + E Sbjct: 171 IAPPDHALVRERRIALDMLERETFLVRESGSGTRRAMERFFAEHRVSFRPGMEVSSNEAI 230 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 + L + +L L L L + + ++ + + Sbjct: 231 KWAVQAGMGLSVVPL---ATIMAELETLRLKVLDVEHLPIVRY-----LYVVHRESKQLS 282 Query: 302 PKIVWLRETIKNLYAS 317 R+++ + Sbjct: 283 TAASAFRDSLVSGAHE 298 >UniRef50_C3JW42 Transcriptional regulator, LysR family n=4 Tax=Rhodococcus RepID=C3JW42_RHOER Length = 292 Score = 193 bits (493), Expect = 5e-48, Method: Composition-based stats. Identities = 48/312 (15%), Positives = 102/312 (32%), Gaps = 30/312 (9%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L + E +AA+R+++ S +S+++ L LFV + + T Sbjct: 1 MELRQLRAFLAVADELHFGRAAERLHIGQSPLSQTIRALERELGTDLFVRTTRSVQLTAA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQT-PRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 ++ ++ + + + + +L+AL++ + +P Sbjct: 61 GEALVTPARIIEAQIAVVREIASAASTGETGRVTVGFGGTGGYTVLSALTRSLADSHPGI 120 Query: 127 TIKLRN--WDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 ++LR + + LDA+ RG +D+G G +P + + + V + Sbjct: 121 ELELRPQMYSGEVLDALRRGALDMGIVGLP-----------IPRGFETHTVREETLMVAV 169 Query: 185 RKDHPA-LHQTWNLDTFLRYPHISIC--WEQSDTWALDNVLQELGRERTIAMSLPEFEQS 241 H H + + + + A +V G T+A P+ Sbjct: 170 PARHHLGAHDSVSPEDLATERFVMYPAEHGSVVRDATLSVCATAGFTPTVAHEAPDPYSL 229 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 L M + + + L +V LP+ + + W N Sbjct: 230 LAMVGAGVGIAVVV-----ESTAHLSMDGVVYLPIA-----GATPTLKIAMAWRPNNPTP 279 Query: 302 PKI---VWLRET 310 LRE Sbjct: 280 AVHTVTRVLREQ 291 >UniRef50_Q0RL92 Putative uncharacterized protein n=1 Tax=Frankia alni ACN14a RepID=Q0RL92_FRAAA Length = 313 Score = 193 bits (493), Expect = 5e-48, Method: Composition-based stats. Identities = 47/312 (15%), Positives = 99/312 (31%), Gaps = 22/312 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L+ L + ++ + ++AA+R+ + A+S+S+ +L LFV S + TP Sbjct: 8 VELHHLRHFVAVAEDLNFSRAARRLCIAQPALSQSIKRLEVSLGLELFVRSRTNVELTPA 67 Query: 68 MVSMEQNLAEWMQMSNLL-LDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + L + L +P + +L A+ + + P Sbjct: 68 GHAFLVETKATLLQVERAELTARRVASGEQGSLRLGYVTPAVFEILPAIIRSFSRESPDV 127 Query: 127 TIKLRNWD-YDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + D +D + G++D+G LP + ++ + Sbjct: 128 EVIFEELPVEDQIDKLRGGDIDLGIIMGR---------RELPPEVHLHLIGHVDVAAAVP 178 Query: 186 KDHPALHQT-WNLDTFLRYPHISIC--WEQSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 P + L P I + + LG T+A +L Sbjct: 179 STWPLARREQIRLKDLRHQPLIMVPRERHPDIYDDFMAACRRLGFSPTVAHRTSNPMTTL 238 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 + A + L + + +P+V P + W R + P Sbjct: 239 SLVAGGMGIGLVAGASTSFWVRDVTIVPIVDSP-------GDPIARSMFAAWIPRAQN-P 290 Query: 303 KIVWLRETIKNL 314 + L ++ L Sbjct: 291 ALERLLSSVMAL 302 >UniRef50_Q67TA2 LysR family transcriptional regulator n=1 Tax=Symbiobacterium thermophilum RepID=Q67TA2_SYMTH Length = 303 Score = 193 bits (493), Expect = 5e-48, Method: Composition-based stats. Identities = 50/270 (18%), Positives = 96/270 (35%), Gaps = 14/270 (5%) Query: 11 NLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVS 70 N L + + S+++AA ++++ AVS+ L L + LF + G+ TP + Sbjct: 3 NELDIFCAVAKHGSMSRAAAELHLSQPAVSQRLRALEEQYGLQLFRRTNRGVELTPAGET 62 Query: 71 MEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNALSKQIYQRYPQATIK 129 + + +Q+ L + + + A S + L Q+YP A I+ Sbjct: 63 LVRYAQRILQLERSLQAEMASLRAAEPKQVVIGATSAIGGYALPCTVYLFQQKYPDARIQ 122 Query: 130 LRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDH 188 L+ D + + G VD+ L+++LP V+ + + Sbjct: 123 LQIGKRCDVIQRLEDGLVDLALVEGP-------LVTALPDDWQVSVISEEELVLITPPTG 175 Query: 189 PALHQTW-NLDTFLRYPHISICWEQSDTWALDNVLQELGRERT---IAMSLPEFEQSLFM 244 P + D R P I A++ Q GR+ IA+ L + Sbjct: 176 PLAGKEAYTADDLTRLPLIIREPGSGTRMAVEEGWQAAGRDLRDLNIALELTGVDAIKTS 235 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVAL 274 A + L + + ++ L + L Sbjct: 236 VASGHGVAL-VSRWCVRAEARMGHLRIAPL 264 >UniRef50_A7IMC0 Transcriptional regulator, LysR family n=18 Tax=Proteobacteria RepID=A7IMC0_XANP2 Length = 320 Score = 193 bits (492), Expect = 6e-48, Method: Composition-based stats. Identities = 53/309 (17%), Positives = 101/309 (32%), Gaps = 23/309 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++ L ++++ ++AAK + + SAVSK++ +L A PL TP Sbjct: 27 MEFRPLRSFVEVVRQGGFSQAAKAVLTSQSAVSKAVKQLEAEVGVPLLDRMGHRSVLTPA 86 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + + + LL + L + L QR+P+ Sbjct: 87 GEVVYRRAVKLLADRADLLAELDEIRGLRRGVLRLGLLPACSSVPFTPLLALYRQRFPEI 146 Query: 127 TIKLRNWDYDSLD-AITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 ++L D L+ + G++DI L + D+E L + L Sbjct: 147 EVRLVERDSAQLEDDLRTGDIDIA-----------GSLLPISPEFDFEPLCREPLVAVLP 195 Query: 186 KDHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 HP L P I + + + + + G IA + + ++ + Sbjct: 196 SGHPLATQAEIRLADLRDTPFIMLESGLALHRIVLDASRRAGFLPAIAARSSQIDFTMEL 255 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 AA L +A PR Q H + + L LE + W + + Sbjct: 256 AAA--GLGVAFLPRMIA--AQRHDAAVCQVRLAEP-----DLEWSMAMAWRRGAYLSDAA 306 Query: 305 VWLRETIKN 313 ++ Sbjct: 307 SAWLALVRE 315 >UniRef50_C8XBJ1 Transcriptional regulator, LysR family n=1 Tax=Nakamurella multipartita DSM 44233 RepID=C8XBJ1_NAKMY Length = 303 Score = 193 bits (492), Expect = 6e-48, Method: Composition-based stats. Identities = 49/306 (16%), Positives = 97/306 (31%), Gaps = 21/306 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L + +E S T+AA+R VT +S + L + LF +P G+ T Sbjct: 1 MELRSLEYFVAVAEELSFTRAAQRCYVTQPTISAQVQALEREVGESLFDRTPRGIVLTDG 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTP-RGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 ++ + + + + + + L ++ QR+P Sbjct: 61 GRTLLPYARRCLAAVADAKAEFSARAGLLRGALHVGTGGGIEHTTVPTLLGRMRQRHPGI 120 Query: 127 TIKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 I + LD + +G ++ R + LP AI +F+D Sbjct: 121 DIHVTEATSAPLLDMVLQGRLNAAVIARPAE--------PLPAAITASAMFTDRLVAVFD 172 Query: 186 KDH-PALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 D P L P I+ L++V E+G T+ + L Sbjct: 173 PDAIPLPGDPVPLGALAGQPIITYPRTSGLRARLEDVATEIGVTLTVNYVANDVRLQLAF 232 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 A + + +A + + L L ++ + L+W + + Sbjct: 233 ARE--GVGVAISAGSDPALSDLAGLTRRSI--------SPSIGFDKILIWRNDLTPCAPL 282 Query: 305 VWLRET 310 + Sbjct: 283 RAFLQL 288 >UniRef50_B7RV59 LysR substrate binding domain protein n=1 Tax=marine gamma proteobacterium HTCC2148 RepID=B7RV59_9GAMM Length = 292 Score = 193 bits (492), Expect = 6e-48, Method: Composition-based stats. Identities = 38/303 (12%), Positives = 92/303 (30%), Gaps = 33/303 (10%) Query: 13 LLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSME 72 + ++ + S +AA ++ + AV+ S+ +L ++ LF + ++PT Sbjct: 1 MRAFVVVARHGSFNRAADELSRSQPAVTLSIKQLESYVGLKLFERTTRKVTPTTAGEKFI 60 Query: 73 QNLAEWMQMSNLLL-DKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQATIKLR 131 ++ ++ + D R ++ + +L + + +++P +I + Sbjct: 61 PVAERLLREFDMAIYDVTATADCRSGHVSMSVLPSVATRILPDVISEFTEKFPDISIHVS 120 Query: 132 NWDYDSLDA-ITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPA 190 +++ + + R EVD G +++ L D + KDHP Sbjct: 121 DYNAQGVQRSVERNEVDFGIGSLWHPNSK----------LEFRPLMEDRFELVCHKDHPL 170 Query: 191 L--HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQP 248 + +S L L+ M Sbjct: 171 AAEGAPVTWEQLKGLSFLSTG--------LTQALKMQRYIGNPKFEFTTTNTLFAMLKA- 221 Query: 249 DNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWLR 308 N+ + P L +LP ++ + + +P + Sbjct: 222 -NVGVTVLPTLAMPQED----DLRSLP-----MVDPVETREICVILRQDWTLSPAANAMM 271 Query: 309 ETI 311 E + Sbjct: 272 EVL 274 >UniRef50_B4DCH5 Transcriptional regulator, LysR family n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4DCH5_9BACT Length = 298 Score = 193 bits (492), Expect = 6e-48, Method: Composition-based stats. Identities = 42/308 (13%), Positives = 101/308 (32%), Gaps = 25/308 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L + ++R+ T+AA R+++ +A+S+ + KL PLF + T Sbjct: 1 MELYQLQYFLEVARQRNFTRAAARLHLAQAALSEQIRKLEDELATPLFQRGRRESTLTAA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNALSKQIYQRYPQA 126 ++ + ++ + K + A + +L A +R+PQ Sbjct: 61 GETLRGHAEALLERAAAARHAVQELVGLRSGKLVIGAIPSVSAGLLPAAVTAFRKRHPQV 120 Query: 127 TIKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + + +++ + + G V++G + D L ++ + Sbjct: 121 ELVIAEGTSEAVAEGVESGRVEMGVIQHPTPAGP----------FDERTLLTEPFVILAG 170 Query: 186 KDHPALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 H + +L + P + + + G E +A E E + Sbjct: 171 PHHAIARHRRVSLASLAGEPFVFFK--GRARESALAACRAAGFEPRLACESGELETVRAL 228 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 A L +A P + + K+E ++ + ++ +P Sbjct: 229 VAA--GLGVAILPELAAQRARPAC--------ALVRLSEPKVERKLVIVTRRGHAPSPAA 278 Query: 305 VWLRETIK 312 ++ Sbjct: 279 AEFETLLR 286 >UniRef50_Q46P28 Transcriptional regulator, LysR family n=1 Tax=Ralstonia eutropha JMP134 RepID=Q46P28_RALEJ Length = 316 Score = 193 bits (492), Expect = 6e-48, Method: Composition-based stats. Identities = 41/315 (13%), Positives = 103/315 (32%), Gaps = 21/315 (6%) Query: 7 TLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTP 66 + L L + Q RS ++AA+R+ V A+S++++ L LF G+ +P Sbjct: 2 NITLRQLRYFVEIAQSRSFSRAAERLRVAQPALSQNISSLEDSLGAKLFERHARGVEISP 61 Query: 67 LMVSMEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQIYQRYPQ 125 + + + + ++ L D + L+ + ++ L + + YP Sbjct: 62 AGERLLTSAIDILARTDALKDDIDGRASLPTGSVRLSIAGSIAGAVIAPLLGAVAREYPG 121 Query: 126 ATIKLRN-WDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVW- 183 + +R ++S + G+ + S + L+ + ++ Sbjct: 122 IEVTVRESMSFESRALVESGQAHLALMPSPSEI----------QGMASIPLYEERFMLYG 171 Query: 184 LRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 R +T P + ++ +GR + L + + Sbjct: 172 TRAAMRRKPETMTFAEVAELPLAAPDGAHDLRKIIERAANAIGRSLDVRYELNSPQMLIA 231 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 +A ++ + +V P+ + + + L+W +P Sbjct: 232 LARDGLAYVVMPPSACLEAVAAKS---IVGRPVTEPDLTRIQ-----ALVWPGDRPLSPA 283 Query: 304 IVWLRETIKNLYASM 318 +R+ I ++ + Sbjct: 284 AAAIRDLIAHIVGDL 298 >UniRef50_UPI0001A45942 HTH-type transcriptional regulator gltC n=1 Tax=Neisseria subflava NJ9703 RepID=UPI0001A45942 Length = 297 Score = 193 bits (492), Expect = 6e-48, Method: Composition-based stats. Identities = 50/316 (15%), Positives = 101/316 (31%), Gaps = 28/316 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNS----PLGLS 63 +D L C L++ +S + A +N+T VSK + L PL + Sbjct: 1 MDFKSLHCFAELIRLQSFSATASALNLTQPTVSKIIQSLEEELGVPLLCRENGRKKRQVQ 60 Query: 64 PTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQIYQR 122 PT + + ++ + +LLL + L + +L+ +Q+ Sbjct: 61 PTAIGEEVYRHALNLLHERDLLLARVDDYRHVKSGTLRLGL-ALFGSDLLSHALFDFHQK 119 Query: 123 YPQATIKLRNWDYDSLDA-ITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPC 181 +P + +++ + E+D G +LL+ + D L Sbjct: 120 WPDIELSFLEQGSLAIEQSLRNNELDAG-----------QLLAPVHEDFDSITLCDYPLV 168 Query: 182 VWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQS 241 V + K+ A H L + P I S + + G + ++ Sbjct: 169 VLMPKN-RARHDALTLKSLQHEPFILFGAGFSLNETIQTACRNQGFTPNVVCRTGQWNLV 227 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 M A N+ +A P Y + L + ++ T+ W K Sbjct: 228 ADMVAH--NMGIALLPEYYARKINPDVFAAIPL-------VEPEIRWQLTMAWKKHQRPT 278 Query: 302 PKIVWLRETIKNLYAS 317 P + + ++ + Sbjct: 279 PALRAWLDVVREAFGR 294 >UniRef50_UPI00019F10A8 LysR family regulatory protein n=1 Tax=Citrobacter youngae ATCC 29220 RepID=UPI00019F10A8 Length = 304 Score = 193 bits (492), Expect = 6e-48, Method: Composition-based stats. Identities = 42/315 (13%), Positives = 95/315 (30%), Gaps = 19/315 (6%) Query: 7 TLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTP 66 L L L + ++KAA R +++ S+++ ++ L D LFV P G+ T Sbjct: 2 KFTLRQLEFYIALAETLQISKAAARCHISQSSMTIAMRNLEEALDVQLFVRYPKGVKLTA 61 Query: 67 LMVSMEQNLAEWMQMSNLLLDKPHHQTP-RGLKFELAAESPLMMIMLNALSKQIYQRYPQ 125 + + S +D H ++ + L ++ + I +R+P Sbjct: 62 EGERFLAHACNIINCSRSAVDALHDRSEILTGTVRIGIAETLSAYLIPDILNDIERRFPL 121 Query: 126 ATIKLRNWD-YDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 + + A+ +VD ++ E +W Sbjct: 122 LELVFHEATAPQLVQALREQKVDFCLL--------LTSNIGHDTDLEIETFIRSQRRLWT 173 Query: 185 RKDHPA-LHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 HP + L ++ P + + + + + Q+ G I FE Sbjct: 174 SIGHPLQSQSSIRLIDVVKLPFLLLETD-KYPDVIIDYWQQRGFTPNICFRSNSFEAIRS 232 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 + A+ + L L ++ + + V P+ Sbjct: 233 LVAK--GRGITILSDLVYRPWSLDGLRVMHRTIDDFITWMDVGTVKIAA-----QPLTPE 285 Query: 304 IVWLRETIKNLYASM 318 + + + ++ + Sbjct: 286 AMKVIDFLRQAITRL 300 >UniRef50_A3QFK5 Transcriptional regulator, LysR family n=69 Tax=Gammaproteobacteria RepID=A3QFK5_SHELP Length = 304 Score = 193 bits (492), Expect = 7e-48, Method: Composition-based stats. Identities = 49/314 (15%), Positives = 103/314 (32%), Gaps = 26/314 (8%) Query: 9 DLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLM 68 L ++ + SV+ AA+++++T SAVS SL +L PLF+ L+ + Sbjct: 4 SLKQIMVFDAVASLESVSAAARKLSMTQSAVSMSLGQLENLLGRPLFIRQGNRLTLSHWG 63 Query: 69 VSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQATI 128 + +Q + + H Q +F L + +L L +I +P+ I Sbjct: 64 NWLRPRARRLLQDAQQIELGLHEQHLISGRFRLCSSQTAAEHLLPELISKIDTDFPELRI 123 Query: 129 KL-RNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKD 187 +L + ++ + E D G + + E D V Sbjct: 124 ELTVENTENVVEGLLNYEYDFGIIEGRNDDS----------RLYQEQWLDDHLVVVASPH 173 Query: 188 HPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAA 246 HP QT +L + + + + + + + + Sbjct: 174 HPYAKQTNISLAQLEQARWVLREQGAGTRRIFEGAIHGVIEKLHVWKEYEHVSLLKALVK 233 Query: 247 QPDNLLLATAPRY-CQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIV 305 L ++ P + +L ++ P Q ++ + +W + NP Sbjct: 234 NGPYL--SSLPFLDVEKEVAAGELVILPTP-------QLNMQRHLSFVWRCDSGENP--- 281 Query: 306 WLRETIKNLYASMA 319 LR+ + ++ Sbjct: 282 -LRDCVITEARRLS 294 >UniRef50_UPI0001B565BC LysR family transcriptional regulator n=1 Tax=Streptomyces sp. AA4 RepID=UPI0001B565BC Length = 298 Score = 193 bits (492), Expect = 7e-48, Method: Composition-based stats. Identities = 37/274 (13%), Positives = 81/274 (29%), Gaps = 21/274 (7%) Query: 9 DLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLM 68 +L L + + S T+AA +++ ++S+ + L LF P G T + Sbjct: 4 ELRQLRYFVAVAETTSFTRAAAALHIAQQSLSQQITVLERQLGAQLFTRDPRGARLTAIG 63 Query: 69 VSMEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNALSKQIYQRYPQAT 127 + ++ + LA + +L + + + + P+ T Sbjct: 64 ELFLPEARVVLARADTAVATVARAVRGEIGTLRLAFLASTANYLLPPVMRAVREHLPELT 123 Query: 128 IKLRNWD-YDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRK 186 + + ++ + G D GF+ + L ++ C L Sbjct: 124 VTTAEVSIAELVEGVRDGRFDAGFTRPPLVD-----------DLATHTLLTEEVCAVLPT 172 Query: 187 DHPALHQT-WNLDTFLRYPHISICW--EQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 H + L P + D G + + L Sbjct: 173 GHRLADRPALRLSDLADEPWVLTPRASWDPWHRKYDADFAAAGFTPEVVQRTATVQGLLG 232 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLP 277 + A + + R + + L + +V +PL Sbjct: 233 LVAA--GVGVT---RLARSAHSLRRTGVVFVPLE 261 >UniRef50_D2PY57 Transcriptional regulator, LysR family n=3 Tax=Actinomycetales RepID=D2PY57_9ACTO Length = 293 Score = 193 bits (491), Expect = 8e-48, Method: Composition-based stats. Identities = 43/270 (15%), Positives = 88/270 (32%), Gaps = 15/270 (5%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L + +++ T+AA+ ++++ S +S S+ L LFV + + T Sbjct: 1 MELRHLEHFVAVAEQKHFTRAAEAMSISQSGLSASIRALERELHASLFVRNTRSVELTEA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTP-RGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 ++ + + D + E L ++ + AL + YP Sbjct: 61 GRALLCEGRRTLAAAEAAKDAVAAVQGLLRGHLNVGLEQCLGVVDVPALLAKFRSAYPGV 120 Query: 127 TIKLRN-WDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 I++R LD + G +D+ F P +D L ++ + Sbjct: 121 EIEVRQGGSTPMLDELASGRLDVAFVATAGDPVD---------GLDLRPLSTESMVLVCA 171 Query: 186 KDHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 DH +L+ + D G + + + + L + Sbjct: 172 HDHRLANASQVSLNDLAGESFVDFDRTWGARAISDQAFAAAGVAHPVTIEVNDVHTLLAL 231 Query: 245 AAQPDNLLLATAP-RYCQYYNQLHQLPLVA 273 A L +A P R +PL+ Sbjct: 232 VAHD--LGVALVPERIAAKRGDHRTVPLIP 259 >UniRef50_A6W0Q8 Transcriptional regulator, LysR family n=2 Tax=Marinomonas RepID=A6W0Q8_MARMS Length = 295 Score = 193 bits (491), Expect = 8e-48, Method: Composition-based stats. Identities = 38/273 (13%), Positives = 81/273 (29%), Gaps = 14/273 (5%) Query: 7 TLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTP 66 + L L + ++ SVT AA+ ++++ A S++L +L A PLF L TP Sbjct: 2 RITLRQLQIFEAVVHTGSVTAAAEMVSISQPAASQALRELEALLGRPLFRRHGKRLQITP 61 Query: 67 LMVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + + + ++ LAA + +L +++P Sbjct: 62 QARHLLPQARAVLSQIEQI-ESMGNEDELSGSLHLAASVSVGNYLLPKQMSLFKRQHPNI 120 Query: 127 TIKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 L + + + G+ ++GF + +V D V+ Sbjct: 121 RFNLDIGNTQSVIQQLLTGKAEVGFIEGY----------CQHAELMTQVWLKDELVVFGS 170 Query: 186 KDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMA 245 + + + + + L+ + + +SL E Sbjct: 171 AEEER-PKNLSWEDLKEASWVMRESGSGTRNILEQATAAQIPQLNVVLSLAHMEAVKQAV 229 Query: 246 AQPDNLLLATAPRYCQYYNQLHQLPLVALPLPF 278 L + + L PL Sbjct: 230 IHQMGLG-CLSRMAISQELNAGLIRLYQTPLEL 261 >UniRef50_A4G228 Transcriptional regulatory protein, LysR family n=18 Tax=Betaproteobacteria RepID=A4G228_HERAR Length = 367 Score = 193 bits (491), Expect = 8e-48, Method: Composition-based stats. Identities = 39/311 (12%), Positives = 86/311 (27%), Gaps = 22/311 (7%) Query: 6 TTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPT 65 L L + + + S ++AA+ +++T AVS + KL LF + T Sbjct: 46 KNATLRQLKVFETVARLLSFSRAAEELHLTQPAVSTQVKKLEDHAGLALFEQLGKKIYLT 105 Query: 66 PLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNALSKQIYQRYP 124 P + +Q D K +A L + + + Sbjct: 106 PGGTELLHYSRTIIQQFQEAEDAMTQFKGITGGKLNVAVI-SAGDYFFPRLLVEFARSHQ 164 Query: 125 QATIKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVW 183 T+ L + + L+ + D+ R P + Sbjct: 165 GVTLNLSVHNREGLLNQLANNLTDLAIMVRPPTDMDTINEPFAPH----------PYVIV 214 Query: 184 LRKDHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 DH + + + T + P + ++++ + IAM + E Sbjct: 215 AAPDHHLVSKKNIPMSTLIHEPFVVREKGSDTWHSMEDGFGSRIDDLNIAMEIKSTETIK 274 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 + ++ + L + + + + + ++ K P Sbjct: 275 QAVIA--GMGISFLSAHTISMELQAGS------LTVLDVEGFPVMLNWYVVHRKNKRLPP 326 Query: 303 KIVWLRETIKN 313 R + N Sbjct: 327 VAQAFRNFLLN 337 >UniRef50_Q5FRA7 Putative transcriptional regulator n=1 Tax=Gluconobacter oxydans RepID=Q5FRA7_GLUOX Length = 308 Score = 193 bits (491), Expect = 8e-48, Method: Composition-based stats. Identities = 48/297 (16%), Positives = 100/297 (33%), Gaps = 27/297 (9%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L + + +ER++T+AA+R+ + +++ L + LF G+ TP Sbjct: 2 IELRHLHAVIAIAEERNLTRAAERLGIQQPPLTRLLKGMEQELGVQLFERHARGMRLTPA 61 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQ-TPRGLKFELAAE-SPLMMIMLNALSKQIYQRYPQ 125 SM + + ++ + ++ + + S L L + Q + +P Sbjct: 62 GRSMLKGAYDVIERMDETVEDVRRIVRGEAGELSIGFTNSALCHPSLPDMLGQFRETWPD 121 Query: 126 ATIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 + L L A+ VD+ F S + E++ + V + Sbjct: 122 VGLTLTEGNSSQLLGALREDTVDVAFVRTSIPYVS---------DVVVELIVEEPMVVAV 172 Query: 185 RKDHPALHQT----WNLDTFLRYPHISICW--EQSDTWALDNVLQELGRERTIAMSLPEF 238 + H + L I + + G I P+ Sbjct: 173 PRTHRLAKEAPAGGLKLAELEDEDFILYQSQYNNGLYKTIVDACLGAGFTPRIRQKGPQL 232 Query: 239 EQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWH 295 +L + A L ++ P+ Q + H +V +PL + L P L++ Sbjct: 233 LAALNLVAG--GLGISLVPQSMQQH---HAGQVVYIPLS----SRTALTAPLYLVFR 280 >UniRef50_Q0BQN6 Hydrogen peroxide-inducible genes activator n=2 Tax=Acetobacteraceae RepID=Q0BQN6_GRABC Length = 317 Score = 193 bits (491), Expect = 8e-48, Method: Composition-based stats. Identities = 52/318 (16%), Positives = 98/318 (30%), Gaps = 26/318 (8%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 ++ L L L + + R +AA++ V+ A+S+ + KL LF + Sbjct: 4 MNLAGLSLRDLEYAVAVSELRHFGRAAEQCGVSQPALSEQVRKLEDLLGVTLFDRGNRQV 63 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQIYQ 121 PT ++ +Q + LLL+ Q L L L ++ + + Sbjct: 64 RPTEQGEAILSQARGILQQARLLLEMAQSQQGSLTGTLRLGVIPTLGPYYLPSVLRSVLG 123 Query: 122 RYPQATIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 R P ++++ D LDA+ G++DIG S I E + + Sbjct: 124 RLPGLSLQIEELKTGDLLDALRVGKLDIGLLAWLSPMD----------GIVAEPILDEPF 173 Query: 181 CVWLRKDHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELG----RERTIAMSL 235 + HP + NLD + + ++ G + + Sbjct: 174 LLACPTGHPLAFRRDVNLDALPVDGLLLLEEGHCLRDQALSLCARQGSRTAHTQKQRFAC 233 Query: 236 PEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWH 295 E M A + + P + L PL L+W Sbjct: 234 -SLEMLRHMIAAGEGY--SLLPALAARGREDLHGLLSLSPL------TDSAARRICLIWR 284 Query: 296 KRNSHNPKIVWLRETIKN 313 + L +++ Sbjct: 285 GSDPRGDGYGRLAGLLRD 302 >UniRef50_C8W2X0 Transcriptional regulator, LysR family n=1 Tax=Desulfotomaculum acetoxidans DSM 771 RepID=C8W2X0_DESAS Length = 305 Score = 193 bits (491), Expect = 8e-48, Method: Composition-based stats. Identities = 39/311 (12%), Positives = 88/311 (28%), Gaps = 23/311 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +++ L + + ++ TKAA + ++ AVS + L LF S ++ T Sbjct: 1 MNIKQLEAFLQVARHKNFTKAAVHLMMSQPAVSFQIKSLEEDLQINLFERSEKKVALTEA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + ++ + + +L A I+L L ++YP Sbjct: 61 GRLLYPVAMQMVRQYHKIRASLDDLRNLKTGHLQLGACPAAGEILLPRLIGAFREQYPGV 120 Query: 127 TIKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 I L+ + + +V +G ++ + D Sbjct: 121 KISLQVGGSSQVNRWLKERDVVMGILSIPVQID----------GVEGQPWLRDHLAFIAP 170 Query: 186 KDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTI---AMSLPEFEQSL 242 HP + LR + + EL + L + + Sbjct: 171 TWHPWNGAEVKPNDLLRESLVIRETGSGSRQVAEQQFLELNLSLEQFAGILELGSNQSII 230 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 + L + + + + + +P E L W++ + Sbjct: 231 NAVRAGLGIGL-VSSWTVRDDIARNNIGVFTVP-------GLTFEYNLYLAWNQPGAEGL 282 Query: 303 KIVWLRETIKN 313 + R + N Sbjct: 283 AVSTFRRFLLN 293 >UniRef50_C9XYN5 Uncharacterized HTH-type transcriptional regulator ybdO n=3 Tax=Cronobacter RepID=C9XYN5_CROTZ Length = 334 Score = 193 bits (491), Expect = 8e-48, Method: Composition-based stats. Identities = 64/322 (19%), Positives = 119/322 (36%), Gaps = 29/322 (9%) Query: 1 MKK--SITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNS 58 M + DLNLL+ + + RSV+KAA+ + +TPSA+S+SL +LR +DPLFV S Sbjct: 15 MANLQDLKKFDLNLLVIFECIYLYRSVSKAAEALFLTPSAISQSLQRLRNQLNDPLFVRS 74 Query: 59 PLGLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQ 118 G++PT + ++ L + + ++ P F L L L L Sbjct: 75 GKGITPTTVGTNLHHYLEDNLNQLEQTINMMQG-APLRKNFVLYCPPALAADHLPGLVSA 133 Query: 119 IYQRYPQATIKLRNWD----YDSLDAITR-GEVDIGFSGRESHPRSRELLSSLPLAIDYE 173 + Y +L ++D ++ + + + D+ ++ + Sbjct: 134 FREHY---DFELEHYDTSLASETAEDLLAYRKADLIIGMAPVT----------SHSVICK 180 Query: 174 VLFSDVPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAM 233 FS+ + ++HP L + + EL ER IA Sbjct: 181 HCFSEETVLVCSENHPRLGDHADDAALAQEKFTLFNGTAEGQKHYHVKSGELIGERQIAF 240 Query: 234 SLPEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLL 293 + + + D + + AP + Y Q+ L V L + L+ Sbjct: 241 TSNSLSSIMAIIGSTDFIGILPAPAL-RRYRQVFGLRPVKLNFSLP-------HYDYYLI 292 Query: 294 WHKRNSHNPKIVWLRETIKNLY 315 +++ + N V I+ + Sbjct: 293 YNRASLTNASFVSFVSLIEQHF 314 >UniRef50_A7ZNW2 Transcriptional regulator, LysR family n=40 Tax=Enterobacteriaceae RepID=A7ZNW2_ECO24 Length = 318 Score = 193 bits (491), Expect = 8e-48, Method: Composition-based stats. Identities = 49/280 (17%), Positives = 95/280 (33%), Gaps = 15/280 (5%) Query: 1 MKKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPL 60 M L L+ L L L ++ ++T A+ +++T A+SK L+ L LF Sbjct: 17 MANWAQKLKLHHLQMLVALGEQGNLTHVARMMHITQPALSKWLSHLEDEIGLTLFERHSK 76 Query: 61 GLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQT--PRGLKFELAAESPLMMIMLNALSKQ 118 GL PT + Q+ + + ++ + ++ Sbjct: 77 GLRPTEGGKLLLQHAQRLINDMERSQHELARFKQGGLVGSLKIGCSP-VATDCVSQAILH 135 Query: 119 IYQRYPQATIKLRN-WDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFS 177 + + P + + L + G VD+ +L L ++Y VL++ Sbjct: 136 LLKEMPTLHLNIEEKVMTPLLQDLLAGSVDVVVGR--------IGGRALQLPLNYRVLYT 187 Query: 178 DVPCVWLRKDHPALHQTW-NLDTFLRYPHISICWEQSDTWALDNVLQELGRE-RTIAMSL 235 + C R +HP + + + I ++DN L + G + Sbjct: 188 EPVCFVARPEHPLAKYAILSWNDLANWRWIVWPTGTPIRISIDNALVDHGVMLPENTIES 247 Query: 236 PEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALP 275 S + D + + + R Q Y QL ++ LP Sbjct: 248 ASMNVSTNLLQSSDMISILSL-RLAQRYASQGQLVILNLP 286 >UniRef50_B5ZWA1 Transcriptional regulator, LysR family n=4 Tax=Rhizobium RepID=B5ZWA1_RHILW Length = 311 Score = 193 bits (491), Expect = 9e-48, Method: Composition-based stats. Identities = 63/319 (19%), Positives = 126/319 (39%), Gaps = 21/319 (6%) Query: 2 KKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLG 61 ++ + DLNLL+ LM+ERSVTKAA R+ + A+S +L LR D LFV Sbjct: 9 HFNLWSFDLNLLVAFDALMKERSVTKAAVRLKIQQPAMSHNLGTLRTLLQDELFVRVGQV 68 Query: 62 LSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGLK--FELAAESPLMMIMLNALSKQI 119 + PT + + + + + L + P P + F + S L ++++ L+ + Sbjct: 69 MQPTHRALRFAEAVEHILSRTQLAIVTPATFEPGEAEQIFRIGFSSELEVLLVPRLAAML 128 Query: 120 YQRYPQATIKLRNWDYDSLDAIT-RGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSD 178 + P + R + + + + +D+G + +LF Sbjct: 129 NEMAPGIRVLARAVNPELVHKLLDDNVIDLGVGCYDDGN----------NRHRRSLLFEQ 178 Query: 179 VPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEF 238 L +T + D ++ H + + + +D+ L+ + ++++ PEF Sbjct: 179 SLMCCYNPKLLDLPETLDRDAYIGLKHALVSQKDAIEGCIDDALKRINVRLDVSVAAPEF 238 Query: 239 EQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRN 298 L + + R + Y L L + +PL S P +++W Sbjct: 239 LTVLTAVLEAPLIA-TLPTRIVKRYAGLFGLAMAEVPLDLKVS-------PISMVWSAAG 290 Query: 299 SHNPKIVWLRETIKNLYAS 317 ++P W+R + L ++ Sbjct: 291 DNDPANRWMRSQVTQLVSA 309 >UniRef50_Q123J4 Transcriptional regulator, LysR family n=1 Tax=Polaromonas sp. JS666 RepID=Q123J4_POLSJ Length = 303 Score = 193 bits (491), Expect = 9e-48, Method: Composition-based stats. Identities = 41/315 (13%), Positives = 97/315 (30%), Gaps = 26/315 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L+ + + ++ S T AA+ ++ + VS+ +++L LF SP L+PT Sbjct: 2 MNLSQVEAFRAVVLSGSTTAAARVLHTSQPNVSRLISQLEKAIGLLLFERSPGKLTPTEE 61 Query: 68 MVSMEQNLAEW---MQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYP 124 ++ + ++ + DK + +AA S + +L K+ Q +P Sbjct: 62 GLTFFTEVQRSFLGLERLDETADKIRRF--GTGELRIAAVSTIAFGLLPRAIKRFAQDHP 119 Query: 125 QATIKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVW 183 + I + + + D+G + S VL+ Sbjct: 120 EVGISIHMGHSSVISQWVDSHFCDLGIVSQLSRQDISTEPD---------VLYRIDGVCL 170 Query: 184 LRKDHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 + ++H + IS ++D + + G +R I + Sbjct: 171 MPENHRLAEKKRLTPMDLEGETFISSAKPDELRKSVDRIFDQAGVKRIINIETSYSSIIW 230 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 + + ++ + + L+ K N Sbjct: 231 SLV--GLGMGISIVNPLAVQDYRSAPVVTRPFDPALPYEGI--------LIIPKGRPANR 280 Query: 303 KIVWLRETIKNLYAS 317 + E ++ + Sbjct: 281 LVAKFSEVLRQIARE 295 >UniRef50_Q13GF1 Transcriptional regulator, LysR family n=1 Tax=Burkholderia xenovorans LB400 RepID=Q13GF1_BURXL Length = 334 Score = 193 bits (491), Expect = 9e-48, Method: Composition-based stats. Identities = 55/311 (17%), Positives = 108/311 (34%), Gaps = 24/311 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 + LN+L + + SV KAA+ I++TPSAVS+ +A L PLF G+ TP Sbjct: 1 MQLNVLRYFLEVSRHGSVRKAAEHIHITPSAVSRHIAILEGMIGAPLFERRSRGMVLTPE 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + + +++ + A + +L + ++ Sbjct: 61 GEILFKYADRIIGNLDIVKCAVGEIRGMKKGILRIFAIEAVASSILYPAIRDFIVKHSGV 120 Query: 127 TIKLRNWDY---DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVW 183 TI++ D + A+ R E D+G R + + L F Sbjct: 121 TIQVDVVGRDNNDVVHALVRDEADLGIMFRLNRNAEIDYLDE----------FDMPFVAL 170 Query: 184 LRKDHPALHQ-TWNLDTFLRYPHI-SICWEQSDTWALDNVLQELGRERTIAMSLPEFEQS 241 HP + + ++ + + + D+V++ LG + +++ E + Sbjct: 171 AAPGHPLAARSSISVRDLAD-TLVGGLPPSSASRSITDDVMRSLGTQIRYTLTVNSMEMA 229 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 A + +A P C LVA+P + V T+ H+ + Sbjct: 230 KEFART--GVGIAILPSVCAQEECKTG-ALVAVPF----IEWGLQTVRATVCGHRGREPS 282 Query: 302 PKIVWLRETIK 312 + +K Sbjct: 283 AAAKAFLDILK 293 >UniRef50_Q15XL4 Transcriptional regulator, LysR family n=1 Tax=Pseudoalteromonas atlantica T6c RepID=Q15XL4_PSEA6 Length = 303 Score = 193 bits (491), Expect = 1e-47, Method: Composition-based stats. Identities = 66/319 (20%), Positives = 127/319 (39%), Gaps = 23/319 (7%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 LDLNLL+ L+ L++ER V+ AA+RI+++ AV+ +L +LR +F+D L V S + Sbjct: 1 MRFDGLDLNLLVALEALIEERHVSAAARRIHLSQPAVTGALKRLREYFNDELLVQSGRRM 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPR--GLKFELAAESPLMMIMLNALSKQIY 120 TP ++ + + + + + P F ++ I+L + + Sbjct: 61 FLTPKAEALAEPVHRALLQIRGEITRAGSFNPLTTTRHFVVSVSDYAYTILLADVVAKAA 120 Query: 121 QRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 P T ++ + + R E+D+ + + L+ D Sbjct: 121 SLAPSVTFEIVPPNEQVNERFERAEIDLLLTVDRFALP----------GHAFTELWRDEE 170 Query: 181 CVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDT-WALDNVLQELGRERTIAMSLPEFE 239 + + A T + DTF H + DN + + G +R + + LP+F Sbjct: 171 VIISWQG--ANFDTIDADTFFACGHAVASFGLERRPSIADNHINQAGWKRRVEVQLPDFG 228 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 L RY ++ +L+ + L + PF + + + WHK + Sbjct: 229 ALCQAVVGTKRLA-TMHRRYALHFAKLYPIKLHSTWEPFPKIVE-------GMQWHKVRN 280 Query: 300 HNPKIVWLRETIKNLYASM 318 +P + WL IK+ ++ Sbjct: 281 LDPGLQWLAGLIKDGADAV 299 >UniRef50_Q12EW2 Transcriptional regulator, LysR family n=1 Tax=Polaromonas sp. JS666 RepID=Q12EW2_POLSJ Length = 309 Score = 193 bits (491), Expect = 1e-47, Method: Composition-based stats. Identities = 44/310 (14%), Positives = 93/310 (30%), Gaps = 22/310 (7%) Query: 7 TLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTP 66 + L + L+ + S T+AA+ +++T SA+S + + + LF + ++ T Sbjct: 2 NVTLRQIQAFVLVARLGSFTRAAQAMHLTQSALSLLVREFEGAIESRLFDRTTRAVTLTV 61 Query: 67 LMVSMEQNLAEWMQMSNLLLDKPHHQ-TPRGLKFELAAESPLMMIMLNALSKQIYQRYPQ 125 + + + + + +AA L L L + +YP Sbjct: 62 VGSDLFPRAERILADLESAISGVDKLMARERGRVVVAAPLLLSSTYLPPLLAAFFAKYPG 121 Query: 126 ATIKLRN-WDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 + L++ L + G D+G S + + +LFS+ Sbjct: 122 IEVVLQDTLPSQVLPLVRGGAADVGIGTFASDE----------VDVRRTLLFSEAMVAAF 171 Query: 185 RKDHPALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 H Q + P +++ + G A + Sbjct: 172 PVGHAFSRLQKLTWADVAQEPVLALSRGSVFRDLTEAGFAAAGLILKPAREANYAGSLIG 231 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 M L +A P Y ++ + P ++ +L+ S +P Sbjct: 232 MVDA--GLGVAILPGYAVKLTDPARIGWHRVENPL-------IDREVSLVQRAGVSLSPA 282 Query: 304 IVWLRETIKN 313 + I Sbjct: 283 AQGFVDFIVA 292 >UniRef50_A1K6J7 LysR-family transcriptional regulator n=5 Tax=Proteobacteria RepID=A1K6J7_AZOSB Length = 303 Score = 192 bits (490), Expect = 1e-47, Method: Composition-based stats. Identities = 42/312 (13%), Positives = 104/312 (33%), Gaps = 24/312 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +D+ L + +E ++ +AA R++++ +++ + +L D LFV +P G+ T Sbjct: 1 MDIRQLRYFIAVAEEANIGRAATRLHMSQPPLTRQIQQLEEELDTQLFVRTPRGMELTQA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + ++ + ++A ++ + L YP Sbjct: 61 GTLFLAEARNIRALIEQATERTQRAGQGKLGRLDVAIFGSAILDRIPKLILNFRNEYPDV 120 Query: 127 TIKLRNWD-YDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + L + + A+ + + +GF+ + I EV+ ++ + + Sbjct: 121 NVVLHTMTKAEQISALRQNRITVGFNRMLAPLP----------DIRSEVIATESLLLAVN 170 Query: 186 KDHPALHQT-WNLDTFLRYPHISICWE--QSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 + P Q D R P I + + + + G +A + + + Sbjct: 171 LNDPLAAQPALPFDVLARRPVILFPSGARPNFVDKVLALCEARGFLPEVAQEVGDAVTGV 230 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 + A + P +V LP ++ V + ++ H+P Sbjct: 231 ALVAS--GFGVCMVPESATTLQYPG---VVYLPFEDAPAE---ARVDLSCIYRAD-DHSP 281 Query: 303 KIVWLRETIKNL 314 + +I+ Sbjct: 282 ILSTFLASIRAT 293 >UniRef50_B5EHW2 Transcriptional regulator, LysR family n=5 Tax=Desulfuromonadales RepID=B5EHW2_GEOBB Length = 326 Score = 192 bits (490), Expect = 1e-47, Method: Composition-based stats. Identities = 42/315 (13%), Positives = 99/315 (31%), Gaps = 25/315 (7%) Query: 1 MKKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPL 60 M +DL L + + +A++ N++PSA+++++ ++ + PLF+ Sbjct: 13 MITRGQNMDLRELEVFLTVAETLHFGRASQACNLSPSALTRTIQRMEEQLEQPLFLRDNR 72 Query: 61 GLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIY 120 ++ +P ++ +Q + + A + +L L + Sbjct: 73 TVTLSPAGERLKSYARLCLQEWQSFRAAIKDEQSVAGTLSIYASITAVYSLLPELLESYR 132 Query: 121 QRYPQATIKLRNWDYDS-LDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 ++YP+ ++LR + + + GE+D+ + S +++ + + Sbjct: 133 EKYPEVQLELRTGAAEQAVTQVQNGEIDLAVAALPDRHSS---------NLEFLPIATIP 183 Query: 180 PCVWLRKDHPALHQTWNLD----TFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSL 235 + H + R P + S LD L+E I + Sbjct: 184 LIFIAPR-HAIAAD-VPQEGGELDLSRAPLVLPQTGLS-RRRLDQWLKEHRISPNITSEV 240 Query: 236 PEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWH 295 E + M + P+ + + E L Sbjct: 241 SGNEAIIAMVR--LGCGVGIVPQLVLERSPFRD------EVAVLEKAPSLKPYEVGLCCG 292 Query: 296 KRNSHNPKIVWLRET 310 +RN P + + Sbjct: 293 RRNLQRPSVKAFWQL 307 >UniRef50_A3VVC0 Hydrogen peroxide-inducible genes activator protein n=1 Tax=Parvularcula bermudensis HTCC2503 RepID=A3VVC0_9PROT Length = 306 Score = 192 bits (490), Expect = 1e-47, Method: Composition-based stats. Identities = 43/314 (13%), Positives = 90/314 (28%), Gaps = 20/314 (6%) Query: 6 TTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPT 65 + L L L + R+ KAA V+ ++S+ + L L S + T Sbjct: 3 DQISLRQLRYFTALSRCRNFRKAAAECGVSQPSLSQQIKNLEERLGQSLVERSSSAVILT 62 Query: 66 PLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQ 125 PL + E + L+ + P L + L +L + + +++ YP Sbjct: 63 PLGREVAAAAVELLDRV-RALEALADRGPLTGVLRLGVKPTLGPYLLPQVIRHLHKSYPD 121 Query: 126 ATIKLRN-WDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 + ++ + + G D+ L + LF + + + Sbjct: 122 LGLVVQEALPLNLERELIEGGHDLAL----------LQLPVSSPDLSTMRLFREPVFLAV 171 Query: 185 RKDHPALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 DHP +T+ +++ + + +E G + Sbjct: 172 AADHPLARKKTFGPPDLQGVDVLTLSPRHHLHDQVMRLCEESGARLRRDYEGTSLDALRQ 231 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 M L P + L + ++ + L W K + Sbjct: 232 M--AGMGLGATFLPALYVQSEIRRDADVRIL-----KPARRPMFRSIALAWRKGAGLDAA 284 Query: 304 IVWLRETIKNLYAS 317 + + E I Sbjct: 285 VNAIAEGIMLAVKE 298 >UniRef50_Q01RY1 Transcriptional regulator, LysR family n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q01RY1_SOLUE Length = 307 Score = 192 bits (490), Expect = 1e-47, Method: Composition-based stats. Identities = 38/270 (14%), Positives = 79/270 (29%), Gaps = 19/270 (7%) Query: 13 LLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSME 72 L +++ +E S T+AA+R+ +T AV+ + L LF + + TP ++ Sbjct: 6 LRVFRIVAEELSFTRAAERLFLTQPAVTMQVKNLEEELGLRLFDRTGQRIVLTPAGRILD 65 Query: 73 QNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNALSKQIYQRYPQATIKLR 131 + + L A + + +L L+ + +P + Sbjct: 66 DYTKRIAALCGDAERDLAVLKGETRGRLALGASTTIAQYLLPRLAGEFLAAFPAIQFSII 125 Query: 132 NW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPA 190 + D + A+ G + +G + + E D + H Sbjct: 126 SGNTSDIVAALADGRIGLGLIEGPAGRS----------DVKCEPFVEDEIVLVTPPAHEF 175 Query: 191 -LHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRE---RTIAMSLPEFEQSLFMAA 246 + I ++ L+ + I + L E A Sbjct: 176 AAGGELDPAALKAASIILREHGSGTRQVVEEALKRARLDTRGLKITLELDSTESIKSAIA 235 Query: 247 QPDNLLLATAPRYCQYYNQLHQLPLVALPL 276 L + R+ L L +P+ Sbjct: 236 A--GLGVGFVSRWALGKEIALGL-LRTVPV 262 >UniRef50_A4FAR0 Transcriptional regulator n=4 Tax=Actinomycetales RepID=A4FAR0_SACEN Length = 307 Score = 192 bits (490), Expect = 1e-47, Method: Composition-based stats. Identities = 40/315 (12%), Positives = 95/315 (30%), Gaps = 25/315 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +DL L +++ + +++AA + V+ ++S+++A+L PLF + Sbjct: 1 MDLLPLRYFRVVARHEHISRAATELRVSQPSLSRTIARLETELGVPLFDRRGRHVRLNRF 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNALSKQIYQRYPQA 126 ++ + + + + +A L+ ++ +P Sbjct: 61 GATLLRRVERALDELEQGRRELADAAGLAHGSVAVA-TETLLTLVEP--LTGFRNDHPGV 117 Query: 127 TIKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 ++L D L+ + RGEVD+ + + ++ + + + Sbjct: 118 DVRLHQSSVDGLLERLRRGEVDLCLMSQPVDDPA----------LESAEVLHEEVLLATP 167 Query: 186 KDHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 H + + P I+ D + G TI E + ++ Sbjct: 168 LGHRLATRERIGMGDLDGEPFITTRPGYWQRVLTDRLFAAAGSRPTIVCEADEPGATAYL 227 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 L + P + + L + L P T +W + + Sbjct: 228 I--SSGLGVGLLPATARRFAPHAPLAWLHLDAP-------DCHRTLTFVWRRDAYVSLAA 278 Query: 305 VWLRETIKNLYASMA 319 R + A Sbjct: 279 QEFRAHVTATVRRAA 293 >UniRef50_A4T9R9 Transcriptional regulator, LysR family n=8 Tax=Corynebacterineae RepID=A4T9R9_MYCGI Length = 303 Score = 192 bits (490), Expect = 1e-47, Method: Composition-based stats. Identities = 52/312 (16%), Positives = 95/312 (30%), Gaps = 27/312 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L +++E T+AA R V AVS + +L PL + + T Sbjct: 1 MELRQLEYFVAIVEEGGFTRAASRERVAQPAVSAQIRRLERSVGQPLLTRTSREVRLTRA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTP-RGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 ++ + + + L + + L + + +P Sbjct: 61 GEALLPHARAALAAVRDGRAAVDDVAGLLRGSVAIGTV-TLHPMNVAHLIAEFHADHPDV 119 Query: 127 TIKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 I L D L + G +D+ ++ V+ + + Sbjct: 120 EITLGTATSDVLIAELGDGRLDLAIVSIAVDEDLP--------GLEVAVITDEAVEAAVA 171 Query: 186 KDHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 HP ++ +L+ R+P IS+ LD G IA + + Sbjct: 172 DGHPLAHRRSLSLEQLSRHPLISLPAGTGLRTRLDTACAAAGLRPRIAFEATSPAELAEL 231 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS-HNPK 303 A L +A P+ L AL L + + L+W R NP Sbjct: 232 ARH--GLGVAILPQSMAR----GGSGLHALRLAPELRGR--------LVWAWRADGANPA 277 Query: 304 IVWLRETIKNLY 315 L E + + Sbjct: 278 ARVLGERARAMA 289 >UniRef50_B2SBJ3 ALS operon regulatory protein n=36 Tax=Proteobacteria RepID=B2SBJ3_BRUA1 Length = 299 Score = 192 bits (490), Expect = 1e-47, Method: Composition-based stats. Identities = 42/310 (13%), Positives = 94/310 (30%), Gaps = 26/310 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L + +E + T+AA ++ + +S+ + L LF P G T Sbjct: 5 MELRHLRYFLAVAEEGNFTRAAAKLGIGQPPLSQQIRDLENEIGVMLFHRVPHGAELTAA 64 Query: 68 MVSMEQNLAEWMQMSNLL-LDKPHHQTPRGLKFELAAESPLMM-IMLNALSKQIYQRYPQ 125 + + + S L + L + +++ + ++P+ Sbjct: 65 GAAFLEEATATIASSEKAKLAAQRAARGESGRLSLGFTASSAFNPIVSGAIRHFRAKWPE 124 Query: 126 ATIKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 + L + + L + + RGE+D F P + + L + V L Sbjct: 125 VELFLTEMNTNLLIERLVRGELDTAFIRPGLED---------PANVRMKRLADEPMLVAL 175 Query: 185 RKDHPAL-HQTWNLDTFLRYPHISICW--EQSDTWALDNVLQELGRERTIAMSLPEFEQS 241 H ++ L P + S + + G E + P+ Sbjct: 176 PSHHRLAVYERLPLSALAGEPFVLFPRIVGLSLYDDIAAACRMAGFEMNVTQEAPQMPSV 235 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 + + A NL ++ P + P+ + + ++ + Sbjct: 236 VNLVAA--NLGVSIVPAAIAQIRLDG---VTYRPIEGEPLVARLALASM------KSLRS 284 Query: 302 PKIVWLRETI 311 P L + Sbjct: 285 PVHDNLISLL 294 >UniRef50_C5CQD2 Transcriptional regulator, LysR family n=1 Tax=Variovorax paradoxus S110 RepID=C5CQD2_VARPS Length = 302 Score = 192 bits (490), Expect = 1e-47, Method: Composition-based stats. Identities = 44/315 (13%), Positives = 94/315 (29%), Gaps = 23/315 (7%) Query: 7 TLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTP 66 L L L + + S T AA+++++T SA+S + +L L + + Sbjct: 2 NLTLRQLRAFAAVAETGSFTAAAQQLHLTQSALSVLVRELEREMGVQLLDRHTRRVQLSE 61 Query: 67 LMVSMEQNLAEWMQMSNLLLDKPHHQ-TPRGLKFELAAESPLMMIMLNALSKQIYQRYPQ 125 ++ + + + LAA + ++ + + +P Sbjct: 62 AGREFLPSVHRLLGDLAGAVAGVTDLRDKKKGLLRLAAPQLMACTLMPRVIALYREAFPD 121 Query: 126 ATIKLRN-WDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 ++L + L +T G+V++ ++ A++ LF D + Sbjct: 122 VDVRLADTLPEHLLAGVTAGDVELAVGQDV----------AVDGAVERRTLFRDRHWLIC 171 Query: 185 RKDHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTI-AMSLPEFEQSL 242 H + Y I+ + + E + +L Sbjct: 172 PPGHAFAKRRKVRWHELGPYTFIAPTRDFRQRVLPELAPAERELMLRPGTQEVSYMTTAL 231 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 M A L L P Y + H L +V L + + R + +P Sbjct: 232 GMVAS--GLGLTVCPTYSAPLVRAHGLQMVRL-------ESPDFHREVCIYSAARRTLSP 282 Query: 303 KIVWLRETIKNLYAS 317 E ++ + Sbjct: 283 AAASFVEILERHART 297 >UniRef50_Q2BLC9 LysR family regulatory protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BLC9_9GAMM Length = 303 Score = 192 bits (490), Expect = 1e-47, Method: Composition-based stats. Identities = 74/321 (23%), Positives = 128/321 (39%), Gaps = 24/321 (7%) Query: 1 MK-KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSP 59 MK ++ +DL LL+ LM+ERSVT+AA R++ + A+S++L +LR F D LF Sbjct: 1 MKPDDLSKVDLRLLVAFNALMEERSVTRAADRLDSSQPAMSRNLRQLRDLFGDELFSRQS 60 Query: 60 LGLSPTPLMVSMEQNLAEWMQMSNLLLDKPH-HQTPRGLKFELAAESPLMMIMLNALSKQ 118 GLSP+P + Q L + L+ F ++ P+ ++ L + Sbjct: 61 HGLSPSPRAEQLHQQLQPLLDDILRLVSPVQLDPAKLERTFNISMIDPISQGLITPLLEY 120 Query: 119 IYQRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSD 178 + + P + +RN + S+D + G++D + + P I ++ ++ Sbjct: 121 LAEHAPGVKLIVRNLESYSMDDLIAGQLDFIINFG----------NEAPANIHSRLIANE 170 Query: 179 VPCVWLRKDHPALH-QTWNLDTFLRYPHISIC-WEQSDTWALDNVLQELGRERTIAMSLP 236 +P L HP + T+ R H+ S D + + R I + Sbjct: 171 LPVCMLSHTHPMADLPEMDQATYRRQRHVDFIVHGFSGHELPDWLFTD----REIFLETN 226 Query: 237 EFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHK 296 +L + +++ L +P S Q EVP LLWH Sbjct: 227 NMVTALNAICDSEMVMIG---GSLISQRSPRSDELTRIPF---ISDQPIPEVPIRLLWHS 280 Query: 297 RNSHNPKIVWLRETIKNLYAS 317 R + W+RE I N + Sbjct: 281 RYHDDAAHRWMREVIDNAFNQ 301 >UniRef50_Q7D3Y4 Transcriptional regulator, LysR family n=3 Tax=Proteobacteria RepID=Q7D3Y4_AGRT5 Length = 317 Score = 192 bits (490), Expect = 1e-47, Method: Composition-based stats. Identities = 61/317 (19%), Positives = 118/317 (37%), Gaps = 21/317 (6%) Query: 2 KKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLG 61 ++ + DLNLL+ +M+E SVT+AA+R+ + A+S +++ LR F D LF+ Sbjct: 6 HFNLRSFDLNLLVAFDAMMEEMSVTRAARRLKIQQPAMSHNISTLRTLFQDELFIRVGQI 65 Query: 62 LSPTPLMVSMEQNLAEWMQMSNLLL--DKPHHQTPRGLKFELAAESPLMMIMLNALSKQI 119 + PT +++ + + ++ + + F L S + +++L L+ ++ Sbjct: 66 MKPTARALNLSGPVRQALRQAQAAVLMADAFEPATEQRTFRLGLSSEVELLLLPDLTARL 125 Query: 120 YQRYPQATIKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSD 178 P I R D + + G +D+ E L+ Sbjct: 126 RDIAPGIRILARGGDATEVNAMLDAGVIDMSVGCSYLPDS----------RHHSEPLYQS 175 Query: 179 VPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEF 238 + +LD ++ H I S + + L+ G E + + P+F Sbjct: 176 SVLCCFNPQLLKVSNPVSLDAYMAAQHAVISQTDSLHGCVKDALEHAGAELEVVAAAPDF 235 Query: 239 EQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRN 298 L A ++ + R + Y L L + +PL P ++W Sbjct: 236 MSVLATARSS-AVIATVSSRIARRYGPLLGLEVSPVPLALSFP-------PVAMVWPLHM 287 Query: 299 SHNPKIVWLRETIKNLY 315 + WLRE I+ Sbjct: 288 DSDLGCAWLREQIREAM 304 >UniRef50_A6NX65 Putative uncharacterized protein n=1 Tax=Bacteroides capillosus ATCC 29799 RepID=A6NX65_9BACE Length = 304 Score = 192 bits (490), Expect = 1e-47, Method: Composition-based stats. Identities = 34/305 (11%), Positives = 94/305 (30%), Gaps = 21/305 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 + + L + + R++++AA R+ V+ VS+++ +L + LF P L T Sbjct: 2 ITIRHLKIFLTVAETRNMSEAAARLYVSQPTVSQTIGELEKMYKARLFERYPKELFLTEA 61 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQAT 127 ++ ++ + L + + A + +L + ++ P Sbjct: 62 GRTLRAQALLAVEAFDRLDEVMKG-EGERPSLRIGATLTVGSTVLCPILDELRSVRPNVD 120 Query: 128 IKLRNWDYDSLD-AITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRK 186 + ++ + +++ + + E+D H I + SD + Sbjct: 121 LSVQVDNTRTIESKLLQNELDAAIVEGIIHRE----------EILSSPIISDCLILVCSP 170 Query: 187 DHPA-LHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMA 245 DHP ++ + P + ++ + I+ Sbjct: 171 DHPFAARKSVEPEELAAQPFVLREQGSGTRALFESFMARRRLPLNISWECSSTAAIKQAV 230 Query: 246 AQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIV 305 + L + +A ++ + + + F L +H+ + + Sbjct: 231 MRGYGLAVLSARLVSGELSRGELKRV--------NVEGCAWQRSFLLCYHRNKVISDTLR 282 Query: 306 WLRET 310 + Sbjct: 283 RFLDI 287 >UniRef50_B1KCH9 Transcriptional regulator, LysR family n=2 Tax=Burkholderia RepID=B1KCH9_BURCC Length = 299 Score = 192 bits (490), Expect = 1e-47, Method: Composition-based stats. Identities = 41/312 (13%), Positives = 102/312 (32%), Gaps = 22/312 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L + + + +AA R+ + +S+S+ +L L +P G+S TP Sbjct: 1 MELRHLRHFVAVAETQHFGRAAARLGMAQPPLSQSIMRLEEQLGIQLLERTPRGVSLTPA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQAT 127 ++ + + L + +A + ++ + + +++P Sbjct: 61 GAALLAEAKPLIAQAELAERRVRQAADELASLSVAFVPMCALRIMPLAIQALRRQWPGVD 120 Query: 128 IKLRNWDYDS-LDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRK 186 ++L + ++ G +D+G + S ++ V+ + Sbjct: 121 VRLIERGSALTVASVKNGSIDLGVVVTSAADVS---------GLESVVIERLRIVAAVPA 171 Query: 187 DHP-ALHQTWNLDTFLRYPHISICW--EQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 P A ++ + RYP I Q A + +E G + L Sbjct: 172 KWPVAAQRSIRIADLARYPLIIFPQQMSQPLFAAFEAARREEGLSPRVTQQARHPYTMLN 231 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 + A + L + + + +P E+ +L+W R + Sbjct: 232 LVAHELGVGLMLDSARYLPVEGVAYVDIEDVP--------ASSEMEVSLVWADRPQKS-W 282 Query: 304 IVWLRETIKNLY 315 + + ++ + Sbjct: 283 HRSMLDIMREIA 294 >UniRef50_Q160L3 Transcriptional regulator, LysR family, putative n=4 Tax=Rhodobacteraceae RepID=Q160L3_ROSDO Length = 311 Score = 192 bits (490), Expect = 1e-47, Method: Composition-based stats. Identities = 49/274 (17%), Positives = 95/274 (34%), Gaps = 15/274 (5%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVN-SPLGLS 63 + L L + + S+ AA ++NV+ ++S ++ +L F PLFV GLS Sbjct: 1 MLRFTLRQLEYFVAVGEMGSIALAADKVNVSSPSISAAINQLEKEFGLPLFVRQHAQGLS 60 Query: 64 PTPLMVSMEQNLAEWMQMSNLLLDKPHHQTP-RGLKFELAAESPLMMIMLNALSKQIYQR 122 PT M + +Q + L+D + + +++ AL +R Sbjct: 61 PTLAGREMLKQAKLVLQNAEGLIDLAADISGNVQGPLSIGGLLTFAQVVVPALRASFERR 120 Query: 123 YPQATIKLRNWD-YDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPC 181 YP + D + R E+D+ + LP + ++ + + P Sbjct: 121 YPDVRVTQHELDQAQIFSMLRRSEIDVALTYDL----------DLPSDLKFQPIATLPPY 170 Query: 182 VWLRKDHPALHQ-TWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQ 240 L DHP + ++ L +P + + S + L + + G + IA + Sbjct: 171 AILCDDHPLAGRARVSVADLLEFPMVLLDLPFSSEYFL-SFFEATGLKPQIAERTRDMAV 229 Query: 241 SLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVAL 274 + A + L + L Sbjct: 230 MRSLVANGFGFSIVNVRPLNDRSPDGKPLRFIPL 263 >UniRef50_B4CZS1 Transcriptional regulator, LysR family n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CZS1_9BACT Length = 305 Score = 192 bits (490), Expect = 1e-47, Method: Composition-based stats. Identities = 48/309 (15%), Positives = 100/309 (32%), Gaps = 21/309 (6%) Query: 14 LCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSMEQ 73 L + S +KAA +T SAVS+ + L F L + T + + Sbjct: 7 KVFCDLAETGSFSKAAVLNAITQSAVSQQIRALENKFQVTLVERGRRNFALTAEGNAFLE 66 Query: 74 NLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQIYQRYPQATIKLRN 132 E +++ N L + H + +AA + + L + K +++P + + Sbjct: 67 ASREILEVYNNLDHRLHELRDVIAGELRIAAIYSIGLHELPSHLKAFREKFPDVELHVEY 126 Query: 133 WDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPAL 191 + + G+VDIG + + E+ D + +HP Sbjct: 127 RRSQQVYTQVLGGDVDIGLVAFPTKR----------NGLQIEIFSEDKLVLICHPNHPLA 176 Query: 192 HQ-TWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQPDN 250 + ++ I+ + +D ++ E AM E Sbjct: 177 GRKKIKIEELNGEKFIAFEPDLPTRKVIDRHFRDHQIEIEHAMEFDNIETVKRAVEIESG 236 Query: 251 LLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWLRET 310 ++ PR + L AL + + P +L + + +P Sbjct: 237 --VSIVPRNTVRQEVESGV-LSALDIEGPKM-----SRPLGILTKRNRARSPAHKEFVAA 288 Query: 311 IKNLYASMA 319 +K +A+++ Sbjct: 289 LKRDFAALS 297 >UniRef50_C6QC52 Transcriptional regulator, LysR family n=1 Tax=Hyphomicrobium denitrificans ATCC 51888 RepID=C6QC52_9RHIZ Length = 295 Score = 192 bits (490), Expect = 1e-47, Method: Composition-based stats. Identities = 39/309 (12%), Positives = 93/309 (30%), Gaps = 24/309 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 + + L + + T+AA + ++ A+S+ + L A LF S + PT Sbjct: 1 MLIRQAHYLLAVADHGNFTRAASALRISQPALSQRILDLEAQLGAQLFDRSGRTVKPTDE 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + +++ ++ +A ++ L ++ Y+R+P+ Sbjct: 61 GRTYIEHVRRALREIQAGERAMQDIAGALSGTLRVAFLPLFTTHLVGPLMQEFYKRHPRV 120 Query: 127 TIKL-RNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 ++ + + A+ +D+G + + I+ E + D C+ + Sbjct: 121 SVTIDILAQAELEAALVEDSIDVGLAFSDVDSD----------EIEVERIQDDELCLVVG 170 Query: 186 KDHPA-LHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 K HP + + +D + IA+ + + + Sbjct: 171 KRHPMYCMDKVRVPQLKHADLALLSQAFITRAPIDRYFRTNKVRPRIAIEANSADSIIAI 230 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 + + L +PLV ++L K + Sbjct: 231 VR-GAPIATVMPSATARQLPGLKAIPLVP----------SAGIWTLSVLQRKDAYRSAAS 279 Query: 305 VWLRETIKN 313 L +K Sbjct: 280 KALITIVKQ 288 >UniRef50_C9KQE9 Transcriptional regulator, LysR family n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KQE9_9FIRM Length = 293 Score = 192 bits (490), Expect = 1e-47, Method: Composition-based stats. Identities = 33/286 (11%), Positives = 84/286 (29%), Gaps = 13/286 (4%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 + L + + Q +++TKAA+ ++V+ +S ++ L A LF L TP Sbjct: 2 MTLTQMRYFYEVCQWQNITKAAEHLHVSQPTISVAMQTLEAETGLNLFHREGRKLVVTPE 61 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQAT 127 + + + + L + +A + L + + +PQ Sbjct: 62 GSKLLGKVNHILPQMDQLETEIQDMAHNRNHIRMALPLQIGTRFLPRILGEFRLAHPQIK 121 Query: 128 IKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRK 186 +++ +L + ++DI + + + Y+ L+ C Sbjct: 122 LEIIETGGISALQMVEDEKLDIALT---------NYATGFSQKLCYQKLYDCECCFVTYP 172 Query: 187 DHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMA 245 HP ++ + F + + + ++ + + P + Sbjct: 173 FHPLAKRKSVSFADFADEELVMLDSHFFIYRMVHDLYTAHSCKPRVIHFSPYLHTIKNLV 232 Query: 246 AQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFT 291 + R ++ + P + K Sbjct: 233 ES--GICSTFLARQAVLPDENLVAVALEEPFYINSGIVTKKGRQVY 276 >UniRef50_B9J8D6 Transcriptional regulator protein n=69 Tax=Proteobacteria RepID=B9J8D6_AGRRK Length = 298 Score = 192 bits (489), Expect = 1e-47, Method: Composition-based stats. Identities = 42/318 (13%), Positives = 88/318 (27%), Gaps = 26/318 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L + + +E + T+AA+RI + +S + L PLF P G T Sbjct: 1 MELRHIRYFLAVAEELNFTRAARRIGIGQPPLSNQIRDLEEEIGAPLFRRLPHGAELTEA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMI-MLNALSKQIYQRYPQ 125 + + + + + ++ + + + YP+ Sbjct: 61 GQVFLREARAILTRAGQAKALALRAARGELGRLRVGFTGSAAFSPIVPSSVRSFRRTYPE 120 Query: 126 ATIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 + L L+ + E+D F + P VL + + L Sbjct: 121 IDLTLEEAHTTRLLERLDAEELDAVFIRP---------GRTGPPGFRSHVLGEESMVIAL 171 Query: 185 RKDHPAL-HQTWNLDTFLRYPHISICW--EQSDTWALDNVLQELGRERTIAMSLPEFEQS 241 HP T L T P + S + + G E + P+ Sbjct: 172 PSSHPLAEADTLPLSTLSDEPFVLFPRAAGPSLFDEIIAACRRAGFEPILGQIAPQITSI 231 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 + A L ++ P + + + L +R+ + Sbjct: 232 ANLIA--VELGVSVVPLAVA--------EIQVPGVSYIPISGDGPVARLALAT-RRDECS 280 Query: 302 PKIVWLRETIKNLYASMA 319 + + A + Sbjct: 281 AVVRNFIARVLATKAELG 298 >UniRef50_D1UNR7 Transcriptional regulator, LysR family n=1 Tax=Burkholderia sp. CCGE1001 RepID=D1UNR7_9BURK Length = 314 Score = 192 bits (489), Expect = 1e-47, Method: Composition-based stats. Identities = 44/306 (14%), Positives = 89/306 (29%), Gaps = 26/306 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 LDL + C E + +AA R+++T +S+ + L LF + T Sbjct: 2 LDLGQVRCFVAAATELNFRRAAARLHMTQPPLSRQIQLLEDNLGVKLFERVGRTVKLTTE 61 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQT-PRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + + ++ + + + L ++ L P+ Sbjct: 62 GRVFLADASRLLNLAEQAESTVRRASKGKTGRVRLGFTGAAGYELIPELLVAAADALPEV 121 Query: 127 TIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + L ++A +D+GF + +++ + + V L Sbjct: 122 DVVLLELVSAAQIEAFAANAIDLGFLRPLPSRQK----------LEFVRVDEEPLIVALP 171 Query: 186 KDHPA-LHQTWNLDTFLRYPHISICWEQS--DTWALDNVLQELGRERTIAMSLPEFEQSL 242 H L P I Q + +L G IA + + L Sbjct: 172 TRHALCAFAQLELKQLDGQPFIMPSPAQGKYFHDRIMGILAAEGVNLNIAQYIDQTPTIL 231 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 + L LA P Q ++ + + F L ++ W + P Sbjct: 232 SLVRA--GLGLAILPASAQRFHYDN--------VEFRLIAGNTLHAEMSMAWRADQDN-P 280 Query: 303 KIVWLR 308 + R Sbjct: 281 AVTAFR 286 >UniRef50_P52670 HTH-type transcriptional regulator ilvR n=98 Tax=Bacteria RepID=ILVR_CAUCR Length = 296 Score = 192 bits (489), Expect = 1e-47, Method: Composition-based stats. Identities = 51/310 (16%), Positives = 102/310 (32%), Gaps = 24/310 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +D+ + + +AA+R+ +T +S+S+ L PLF + + T L Sbjct: 1 MDIRQFRHFAAVAETLHFGRAAERLGITQPPLSQSIQALEKALGAPLFARTKRHVELTAL 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQ-TPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 ++ E + + L D + L+ S +L L ++ + +P Sbjct: 61 GRQWLPHVLEALAAVDALPDTARRLRDGQTGYLSLSFVSTADYSVLPDLVRRYAEAFPGV 120 Query: 127 TIKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 I+L D + AI GE G + SLP A+ Y L S+ Sbjct: 121 EIQLVEATSDVQVPAIQAGERHAGIIIPPPN-------RSLPAALAYRRLVSEPLVAVTP 173 Query: 186 KDHPALHQTWNLDTFLRYPHISICWE--QSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 + +L P + + + + G+ I + + + Sbjct: 174 EAW-GAEGPLDLAALADVPLVLFPRTVAPAFHDLVTGYVAARGQPVRIVQEAIQMQTIIS 232 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 + + + LA A + + LV P+ + L+W +R+ P Sbjct: 233 LVSAGLGMALAPASLRKLARVGVRYVDLVDPPI-----------LETGLVW-RRDEAAPT 280 Query: 304 IVWLRETIKN 313 + L + Sbjct: 281 LQGLLRLVTE 290 >UniRef50_B8HGN1 Transcriptional regulator, LysR family n=4 Tax=Micrococcineae RepID=B8HGN1_ARTCA Length = 312 Score = 192 bits (489), Expect = 1e-47, Method: Composition-based stats. Identities = 47/315 (14%), Positives = 96/315 (30%), Gaps = 19/315 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 D+ L L ++++ S+T AA + +PSAVS+ L KL PL G+ PT Sbjct: 10 FDMRRLAVLLEVVEQGSITAAADLMMYSPSAVSQQLRKLEQEVGQPLLTRRSRGVVPTEA 69 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + + ++ + L L + + +RYP Sbjct: 70 GQVLAGHARQILRQMKAAQSDLDQIAGLKRGALTVGTFPTLAGSFLPIVIRAFKKRYPAI 129 Query: 127 TIKLRNWD-YDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 ++ LR+ + + + G +I +F + + + Sbjct: 130 SLSLRSARFDELVADLQSG------VTGLCLLWDYPWNRFQNDSIRVTEVFRESTVILVA 183 Query: 186 KDHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 HP ++ I L + G E TI +++++ M Sbjct: 184 ASHPLAEQDQVGMEDLRNESWIVRAEAHPVVEVLQRSAHDAGFEPTIGFLANDYQEAQAM 243 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 + +A P+ + L + + L + + P Sbjct: 244 V--SVGMGVAMVPKTA--------VALQHPDVRVLSLGDEAPLRRVLLAQRQDKVYAPAE 293 Query: 305 VWLRETIKNLYASMA 319 V + T+ + A Sbjct: 294 VAFQTTLLEIARERA 308 >UniRef50_B7RS92 Regulatory protein, LysR:LysR, substrate-binding n=1 Tax=Roseobacter sp. GAI101 RepID=B7RS92_9RHOB Length = 300 Score = 192 bits (489), Expect = 1e-47, Method: Composition-based stats. Identities = 49/313 (15%), Positives = 98/313 (31%), Gaps = 21/313 (6%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 + L + +L QERS AA ++ ++PSA+S+ + L A LF + Sbjct: 1 MKRSNPTLLDFQAVLILSQERSFRAAADQLGLSPSALSRQITSLEARLGSRLFDRDTRSV 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNALSKQIYQ 121 T + Q + + L + + +A + +L + + Sbjct: 61 EITVAGSAFAQIAERIINTAEDGLAEFGSYQSAQRGRLTIAGLPSITASLLPQILRNFTA 120 Query: 122 RYPQATIKLRN-WDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 +P+ +K+ + LDA+ G+ DIGF+ RS + +E L D Sbjct: 121 DHPEIDLKIIDALSGSVLDAVDSGQADIGFTAGTVTARS---------RLAFEPLMEDEF 171 Query: 181 CVWLRKDHPALHQTW-NLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFE 239 D P + + P I + S +D Q G + + Sbjct: 172 VALGMPDGPLAEDRAYGWEELVAMPFIVMETGTSVRELIDGTCQRFGHSLSPRFEVAHLA 231 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 + + + L + PR + + L+ + Sbjct: 232 TAGALVSA--GLGITVLPRLTLAILRSETFVIRD-------ISDFGTRRRIGLVRRSGRT 282 Query: 300 HNPKIVWLRETIK 312 +P + ++ Sbjct: 283 LSPTATAFLKYVR 295 >UniRef50_C6C4P6 Transcriptional regulator, LysR family n=4 Tax=Proteobacteria RepID=C6C4P6_DICDC Length = 325 Score = 192 bits (489), Expect = 1e-47, Method: Composition-based stats. Identities = 63/319 (19%), Positives = 114/319 (35%), Gaps = 23/319 (7%) Query: 2 KKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLG 61 K +I T+DLNL + L +E +AA R+ VT SA+S +L ++R + D LF + G Sbjct: 3 KINIETMDLNLFKVFEALYEEGGAGRAALRLGVTQSAISAALGRMRNIYGDRLFERTGRG 62 Query: 62 LSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPR--GLKFELAAESPLMMIMLNALSKQI 119 L PT + +++ + L + G + + + L+ Q+ Sbjct: 63 LRPTRRADELHPIISDALNKCRQSLSMANSVGDEFQGRTVTMGWSDDYEIALARTLTNQV 122 Query: 120 YQRYPQATIKLRNWDYDS-LDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSD 178 YP + R D + VD+ S + +VL Sbjct: 123 AAEYPGIRLIFRQTHSRVAADMLMERAVDLAISTEGFSSSI----------LGRQVLGGG 172 Query: 179 VPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEF 238 L P L+ ++R HI + +D L LG +R I +S F Sbjct: 173 SYACLLDNR-PDAPDALTLEEYIRRRHILVSSGGFI-GIVDEALAALGLQRRIEVSTTHF 230 Query: 239 EQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRN 298 ++ ++L + + L ++ PL L W Sbjct: 231 AAVPYLLKGSESL-VTLPAHAAYPIAAIADLRVLPCPLVLP-------GYAIELGWRLDA 282 Query: 299 SHNPKIVWLRETIKNLYAS 317 +P +V +R+ ++ ++A Sbjct: 283 LRDPAVVAVRQAVQCVFAE 301 >UniRef50_A9C1Z6 Transcriptional regulator, LysR family n=1 Tax=Delftia acidovorans SPH-1 RepID=A9C1Z6_DELAS Length = 295 Score = 192 bits (489), Expect = 1e-47, Method: Composition-based stats. Identities = 32/259 (12%), Positives = 78/259 (30%), Gaps = 16/259 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +DL L L + + +AA++++++ +S+S+ +L LF G + T Sbjct: 1 MDLRQLRHFVTLARTLNYRQAAEQLHMSQPPLSQSIRRLEDSLGVQLFQRDRRGTALTEA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHH-QTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 ++ ++ + + + + + + ++ L + YP Sbjct: 61 GLAALESAELALHHARQMQEVSRATAGGERGRLHIGFIGSATFSLIPRLVQAFRSEYPLI 120 Query: 127 TIKLRN-WDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + L + + G+ D G + + + D L Sbjct: 121 DLVLTESTTREICAQVASGDFDAGLLRYPVTQAT---------DLSITPVEKDELVAVLP 171 Query: 186 KDHPALHQT-WNLDTFLRYPHISICWE--QSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 + +P L + L P I+ + Q G + + + + Sbjct: 172 EGNPLLQRPALRLRDLADQPFINYRPSEVPGLHALVVLACQNAGFMPQVKQHAVQAQTLV 231 Query: 243 FMAAQPDNLLLATAPRYCQ 261 + L +A P Sbjct: 232 SLV--GAGLGVALVPAVVA 248 >UniRef50_Q1AVK2 Transcriptional regulator, LysR family n=1 Tax=Rubrobacter xylanophilus DSM 9941 RepID=Q1AVK2_RUBXD Length = 311 Score = 192 bits (489), Expect = 1e-47, Method: Composition-based stats. Identities = 50/311 (16%), Positives = 97/311 (31%), Gaps = 22/311 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 + L L ++E S++ AA+R+ + +VS+ LA+L PL V S G+ PT Sbjct: 1 MRLRFLEAFCAAVEEGSISGAARRMYLAQPSVSERLAELEREARVPLLVRSRRGVEPTEQ 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQT-PRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + + + + R + +AA S L + A + +R+P Sbjct: 61 GRLLYERARRVLDEVERVEEVLRSLRVRREARLYVAASSTLGEHLFPAWLRGFRERHPGV 120 Query: 127 TIKL-RNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 ++ + + + RG V G + ++ L D V +R Sbjct: 121 IPEVFVGNTKEVVALVGRGTVAFGVIEG----------GEVRGPLESVPLLEDELVVVVR 170 Query: 186 KDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMA 245 HP + R P IS ++ + + G + M L Sbjct: 171 PGHPWARRGVRPQELSREPFISREKGSGTREVVERAISDRGLSLDVRMELGSTSAIKEAI 230 Query: 246 AQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIV 305 L + R ++ + FTL+ + N Sbjct: 231 EA--GLGFSLLSREAIRLELGAG--------HLAVARGFSVSRRFTLIRNPSAELNATEQ 280 Query: 306 WLRETIKNLYA 316 + + + Sbjct: 281 GFCDYLLGICR 291 >UniRef50_B3PFN1 Transcriptional regulator, LysR family n=1 Tax=Cellvibrio japonicus Ueda107 RepID=B3PFN1_CELJU Length = 306 Score = 192 bits (489), Expect = 1e-47, Method: Composition-based stats. Identities = 49/309 (15%), Positives = 89/309 (28%), Gaps = 25/309 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +D L + S ++AA ++++T A+SK +A L PLF ++ T Sbjct: 1 MDTQQLQAFVAIANTGSFSQAANQLHLTQPAISKRIALLEEQVKAPLFDRIGRQIALTQA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTP-RGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + + K +A + + L +Q Q +P Sbjct: 61 GQILLPKAKLILAEVDAAAQAVADLQGTVSGKLSIATSHHIGLHYLPPYLQQFAQDFPLV 120 Query: 127 TIKLRNWDYDSLDA-ITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + + D + + +G D+ P + I L+ D Sbjct: 121 KLDVHFLDSELAHQEVVQGRFDLALVTLALEP---------DIRIASHPLWMDELQFVAA 171 Query: 186 KDHPALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 HP H QT NL Y I T + + IAM + + Sbjct: 172 PSHPLAHMQTLNLAQLSHYDAIMPDPNTYTTRLITTLFDAEHLPLNIAMVTNHLDAIKML 231 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 L P+ L+ L Q + P + H++ S + Sbjct: 232 L--GIGLGWGVLPK-----------RLLDSSLSRLALSQAAIVRPLGAIHHRQRSLSNAA 278 Query: 305 VWLRETIKN 313 + Sbjct: 279 NQFLNLLHQ 287 >UniRef50_D1UHR2 Transcriptional regulator, LysR family n=1 Tax=Burkholderia sp. CCGE1001 RepID=D1UHR2_9BURK Length = 323 Score = 192 bits (489), Expect = 1e-47, Method: Composition-based stats. Identities = 45/318 (14%), Positives = 102/318 (32%), Gaps = 23/318 (7%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 I + L + + +MQ S T AA+ ++ + S VS+ + +L A LF S L Sbjct: 20 NEIDQMKLRQIEAFRAVMQAGSTTGAAEELHTSQSNVSRLITQLEADTRLVLFERSGGRL 79 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQIYQ 121 +P P ++ + + L + +A+ + M L + ++ Q Sbjct: 80 NPKPEAKALYREVERVFVGLKSLAYAADTIRNLGSGRLRIASIPGIGMSFLPRVVQRFRQ 139 Query: 122 RYPQATIKLRNWDYDSLDA-ITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 P T+ + ++++ ++ D+G S + + ++ + Sbjct: 140 SRPDVTVSIHTNTSNTVEQWVSSQFCDVGIVAFVSAAATCQAIALPDAEV---------- 189 Query: 181 CVWLRKDHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFE 239 L K+H ++ +IS+ D V G ER +++ Sbjct: 190 VCLLPKNHRLAGKSKIKASDLRGEQYISLVHGDGSREETDRVFDREGVERNLSLEAQYSA 249 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 M L + A + ++ + P LL+ + Sbjct: 250 TCCEMVK--LGLGVTLAHPLVATDYVGQGIKVLPF--------SPSINYPNFLLYPPHGA 299 Query: 300 HNPKIVWLRETIKNLYAS 317 + +++ + Sbjct: 300 VSQLAEEFAALLRDQFER 317 >UniRef50_Q167Q4 Oxidative stress transcription regulator, oxyR, putative n=28 Tax=Alphaproteobacteria RepID=Q167Q4_ROSDO Length = 313 Score = 192 bits (489), Expect = 2e-47, Method: Composition-based stats. Identities = 33/300 (11%), Positives = 79/300 (26%), Gaps = 23/300 (7%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 + L L L L + + +AA +T A+S + +L A PL + + Sbjct: 1 MIGLTLKQLRYFDALARHKHFGRAADSCAITQPALSLQIKELEALVGAPLVERATREIRL 60 Query: 65 TPLMVSMEQNLAEWMQMSNLLLDKPHHQT-PRGLKFELAAESPLMMIMLNALSKQIYQRY 123 T L + + + L + P + L +L ++ QR+ Sbjct: 61 TSLGSDFITRTRKILLSIDELDELARAAQGPLAGRLRLGVIPTAAPYLLPSIMTSFAQRF 120 Query: 124 PQATIKLRN-WDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCV 182 ++LR + + +D+ + + LF + + Sbjct: 121 ADLDVELRESVTQALIQDLLEARLDLAIVALPISEPALREFA----------LFEEDFVL 170 Query: 183 WLRKDHPALHQTW-NLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQS 241 + + + + + + + + M Sbjct: 171 VRPPQD--AGKPVPSPEMLQEMRLLLLEEGHCFRDQALSFCKSVEAHPRQMMEGSSLSTL 228 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 + M + + P L + + + ++W K N + Sbjct: 229 VQMV--GAGIGVTLIPEMA------LSLETRSADVAVARFPKPGPSRTIGMVWRKTNPLS 280 >UniRef50_Q3SFM8 Transcriptional regulator n=3 Tax=Proteobacteria RepID=Q3SFM8_THIDA Length = 313 Score = 192 bits (489), Expect = 2e-47, Method: Composition-based stats. Identities = 38/309 (12%), Positives = 85/309 (27%), Gaps = 21/309 (6%) Query: 6 TTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPT 65 + L + + + S T+A++ + +T VS + KL PL + + T Sbjct: 3 SHTTFRQLEIFEAIARLGSFTRASEELYLTQPTVSMQMKKLSENVGAPLIEHIGKRIHLT 62 Query: 66 PLMVSMEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQIYQRYP 124 + Q E + + + K L A L + + YP Sbjct: 63 ADGQQLAQATREIFAILDRFTMSVAERRGLKQGKLSLMAI-TTASYFAPRLLGEFAKLYP 121 Query: 125 QATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 + LR + + + + + + + + V Sbjct: 122 GIDVSLRVTNKEQV---------LASIADNLDDLYFLGQPPEDIDVIATPIMDNPIVVLA 172 Query: 185 RKDHPALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 DHP H + L+ + + A++ E G + L E Sbjct: 173 APDHPLAHTRKIPLEQLAKESWLMREKGSGTRNAIERRFAESGIAVHPRLELGSNEAIKQ 232 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 L ++ R+ NQ Q ++ + + + ++ + Sbjct: 233 AILA--GLGISALSRHALALNQPDQFAVLDVD-------GFPILRHWYAVYPAGRQLSVA 283 Query: 304 IVWLRETIK 312 + + Sbjct: 284 ARAFLDYLL 292 >UniRef50_D2B2W6 Transcriptional regulator, LysR family n=17 Tax=Bacteria RepID=D2B2W6_STRRD Length = 324 Score = 192 bits (489), Expect = 2e-47, Method: Composition-based stats. Identities = 60/293 (20%), Positives = 100/293 (34%), Gaps = 19/293 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 LDLN L L + SV AA + VTPSAVS+ LAKL L + G+ T Sbjct: 2 LDLNRLKALHAVSVYGSVGAAADALMVTPSAVSQQLAKLERETGATLLERNGRGVRLTDA 61 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + + + + + A +L + +R+P Sbjct: 62 AGLLADHAERILALVETAEADFEALRGEVVGRLSIGAFPTAARGLLPGALVHLRERHPDL 121 Query: 127 TIKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 ++L + + + + RGE+D+ + ++P + +LF D+ V L Sbjct: 122 RLQLIEREPERQVREVARGELDLAVIQDWVNRPM-----AIPDGLSRAMLFDDIADVILP 176 Query: 186 KDHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 + HP ++ L IS L L+ G E IA E+ L + Sbjct: 177 ESHPLAARSEIELAELSEDRWISSSPGTICHDWLVYTLRSAGLEPDIACMADEYPTQLAL 236 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKR 297 A A PR + + A+P+ + LW Sbjct: 237 VAA--GQGCALIPRLGR---DRVPSGVRAIPI------LPRPIRKIYALWRSD 278 >UniRef50_B8DKE3 Transcriptional regulator, LysR family n=1 Tax=Desulfovibrio vulgaris str. 'Miyazaki F' RepID=B8DKE3_DESVM Length = 307 Score = 192 bits (489), Expect = 2e-47, Method: Composition-based stats. Identities = 49/318 (15%), Positives = 86/318 (27%), Gaps = 21/318 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +D+ L + S KAA+ ++ PS V+ + L PLF + + T Sbjct: 1 MDIRHLKTFLAVAAGLSFRKAAESLHYAPSTVTAQIRALEEDLGAPLFERTGRRVLLTDH 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQAT 127 + +M++ H + + L M+ L ++ R+P Sbjct: 61 GRRLLPRARRIAEMADDARRAVTH-DADSGELSVRMSQSLGMLCLPEALRRFRVRFPATR 119 Query: 128 IKLRNWDYDSLDA-ITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRK 186 + + L A + GEVD+ +D E L + Sbjct: 120 VHVATASRHGLAADLRHGEVDLAL---------LLGRPFAADGVDMETLRHEPLACIAAP 170 Query: 187 DHPALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMA 245 P P + S A++ L + + Sbjct: 171 GSPLAGHGRVTPADLAGQPLVLTRHVWSLRPAIEQTLAAAHVQPGSVLECSSIVIVKRCV 230 Query: 246 AQPDNLLLATAPRYCQY-------YNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRN 298 A L +A P L LV P L VP L R Sbjct: 231 AA--GLGVAVVPLCAVRDEVDRGELRALDAAALVDAPRTDAPGIHTPLSVPVLLALPARR 288 Query: 299 SHNPKIVWLRETIKNLYA 316 + +++L+ Sbjct: 289 QVPAAAAFFAGILRDLFR 306 >UniRef50_A1SEX2 LysR, substrate-binding n=11 Tax=Actinomycetales RepID=A1SEX2_NOCSJ Length = 330 Score = 192 bits (489), Expect = 2e-47, Method: Composition-based stats. Identities = 37/298 (12%), Positives = 85/298 (28%), Gaps = 26/298 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L + + +AA+R+ + A+S+++ L + LF + ++ TP Sbjct: 25 MELRHLRYFTAVAETCHFGQAAERLLIAQPALSQAIRSLESELGVTLFTRTTRHVALTPA 84 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQ-TPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + R L L L + + + P+ Sbjct: 85 GEYFFDESRRILAAVEDSTRGVRQLADGRHGLVRLGLVGTAATSHLPHLVRTLKRELPEV 144 Query: 127 TIKLRN--WDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 + ++ + D + G +D+ I+ V+ + + L Sbjct: 145 AVDVKADILTPELCDLLRAGAIDVAVLRPPVVGE----------GIEIHVVEEEPLILAL 194 Query: 185 RKDHPALHQT-WNLDTFLRYPHISICW-EQSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 + H + ++ P IS E + A+ + + P L Sbjct: 195 PESHALAARGDLGVEDLRNEPFISYAAQESAVNQAVLRACRTADFVPHRSHEAPGTAVLL 254 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 + A L ++ P + + L + + + L W Sbjct: 255 SLVAA--GLGVSLVPASVRAF-PLTGVVFREV--------LDAGTIQLALAWRSDRPR 301 >UniRef50_B7K2F2 Transcriptional regulator, LysR family n=8 Tax=Cyanobacteria RepID=B7K2F2_CYAP8 Length = 324 Score = 192 bits (488), Expect = 2e-47, Method: Composition-based stats. Identities = 46/318 (14%), Positives = 92/318 (28%), Gaps = 22/318 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 + + L + + + +AA++ VT S +S+ + L LF + T Sbjct: 1 MRIEQLQAFLTIAETGNFGQAARQCGVTQSTISRQIQALEGTLGALLFHRTA-QAKLTIA 59 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRGL-KFELAAESPLMMIMLNALSKQIYQRYPQA 126 M + Q + + + +AA + L + +Q YP Sbjct: 60 GEKMLPRAKKICQEWETINQEIADLQGGKQPELCVAAIHSVCSHYLPPILQQFCHDYPHV 119 Query: 127 TIKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 +++ D +L + G VD+ + + E+L+S+ V + Sbjct: 120 QLRVTALGSDRALKVLRDGLVDVAIV-------MNNRFLTTSPEMVVEILYSENIEVLMA 172 Query: 186 KDHPALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 DHP YP + + L I M L + + Sbjct: 173 ADHPLTQFNEIPWSELAHYPQVVFKEGYGMQRLVQEWLTTQNISLKIVMELNTLDAFRGI 232 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQ-LPLVALP--------LPFDESQQKKLEVPFTLLWH 295 Q + ++A P + + L + L L L+ Sbjct: 233 VRQGE--IIALLPETALIEARQDRSLAVRPLAKITEDFLTHESPHKMITNLTREVVLVTT 290 Query: 296 KRNSHNPKIVWLRETIKN 313 P I + ++ Sbjct: 291 SDRLTIPPINHFCQLVQQ 308 >UniRef50_A7IBY1 Transcriptional regulator, LysR family n=15 Tax=Alphaproteobacteria RepID=A7IBY1_XANP2 Length = 313 Score = 192 bits (488), Expect = 2e-47, Method: Composition-based stats. Identities = 46/311 (14%), Positives = 79/311 (25%), Gaps = 26/311 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 + L L + + VT+ A+ +N+T SA S ++A L A + LF + T Sbjct: 1 MTLEQLRIFVAVAEREHVTQGARDLNLTQSATSAAIAALEARYATKLFDRVGRRIVLTEA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + +AA + L K+ ++P Sbjct: 61 GRLFLSEAKAVLARVHAAEKVLTDLADLTRGSLVIAASQTIANYWLPPFIKRFRSQFPGV 120 Query: 127 TIKL-RNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 I L + I G D+G E S + D + + Sbjct: 121 AITLTIDNTDGVARRINEGLADLGLVEGEIDDPS----------VSVAPFAEDELVLVVP 170 Query: 186 KDHPALHQTWN-LDTFLRYPHISICWEQSDTWALDNVLQELGRERT---IAMSLPEFEQS 241 DH H P + + L + G I++ LP E Sbjct: 171 PDHAWAHDPRRQPAELGVGPWVLREHGSGTRAIFETTLSQFGLAPRDLAISLELPSNEAV 230 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 + + + + F L HK S Sbjct: 231 RSAVEA--GAGVTVVSGLVVSNALKAG--------SLVQVKLDLPKRRFFALRHKEFSMT 280 Query: 302 PKIVWLRETIK 312 + I Sbjct: 281 RAQRAFLDLIA 291 >UniRef50_D1BTU3 Transcriptional regulator, LysR family n=1 Tax=Xylanimonas cellulosilytica DSM 15894 RepID=D1BTU3_XYLCX Length = 303 Score = 192 bits (488), Expect = 2e-47, Method: Composition-based stats. Identities = 31/272 (11%), Positives = 80/272 (29%), Gaps = 17/272 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L + L + ++AA ++++T A+S+++ +L + L + ++ TP Sbjct: 1 MELRHIRYFAGLAETLHFSRAALQLHMTQPALSQAMRQLESEVGAKLLDRTTRQVTLTPA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHH-QTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + + + +L + K + P Sbjct: 61 GQRLAHDARRILAAVEESEAAVRRIAAGGADVLRVGLTHCAAPALLPRVVKTLRATLPGV 120 Query: 127 TIKLRN--WDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 +K+R + G +D+G + + +++ + L Sbjct: 121 ALKVRPDLLSGQIATEVGDGRIDVGIVRGAVTA----------VGLASAPAYAEELLLAL 170 Query: 185 RKDHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 +DHP T L + + + G + + + Sbjct: 171 PEDHPLAHAATVTLKDLRTEEFVLPGPGSPLDPVVRRMCAGAGFIPVESTTTDHASVAQA 230 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALP 275 + A L +A P + ++P Sbjct: 231 LVAA--GLGVAFLPAVLAT-ATHPGVTFRSVP 259 >UniRef50_Q8TVB0 Transcriptional regulator of the LysR family n=1 Tax=Methanopyrus kandleri RepID=Q8TVB0_METKA Length = 304 Score = 192 bits (488), Expect = 2e-47, Method: Composition-based stats. Identities = 44/310 (14%), Positives = 107/310 (34%), Gaps = 23/310 (7%) Query: 14 LCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSMEQ 73 + +++++S +KAA+ + +T VS +A L +FD LFV +P G+ T + Sbjct: 10 RTFREVVRQKSFSKAAEALGITQGTVSNQIASLERFFDARLFVRTPEGVELTEEGEIALE 69 Query: 74 NLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQIYQRYPQATIKLRN 132 + + DK + K ++ + +L K+ YP+ + +R Sbjct: 70 AIETVLDAVERAKDKIAAVSKEPSGKVRVSTSTVPGGYLLPGSVKEFRSEYPKVDVIIRV 129 Query: 133 -WDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPAL 191 ++ + + G+ D+ G ++ + + + + S+ V L DH Sbjct: 130 CDSREATEHVLSGDADVAIVGTDAFVTRKSV--------EVVPIASEELVVILPPDHELA 181 Query: 192 HQ-TWNLDTFLRYPHISICWEQSDTWALDNVLQELGR---ERTIAMSLPEFEQSLFMAAQ 247 ++D + P+++ ++ L+ G + I + E + +Q Sbjct: 182 DAMEVSIDDIVGEPYVNRESGSGTRREVEKYLKSHGLGFEDFKIVEEVGSTEAVITSVSQ 241 Query: 248 PDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWL 307 ++ + L + + + + L K + Sbjct: 242 --GAGISIISERAAKRAESAGL------IRIARLEDRPRRFFYALKSDKPLHAS-ATEAF 292 Query: 308 RETIKNLYAS 317 E + + + Sbjct: 293 WEFLLSEFRG 302 >UniRef50_Q1QUX6 Transcriptional regulator, LysR family n=1 Tax=Chromohalobacter salexigens DSM 3043 RepID=Q1QUX6_CHRSD Length = 313 Score = 192 bits (488), Expect = 2e-47, Method: Composition-based stats. Identities = 47/313 (15%), Positives = 106/313 (33%), Gaps = 22/313 (7%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSP-LGLS 63 + L L + + SVT+AA++++V+ ++S ++ ++ LFV GLS Sbjct: 1 MRQFTLKQLRYFVVAGELLSVTQAARKLHVSQPSISAAIQQIEDISGLQLFVRHHAQGLS 60 Query: 64 PTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQIYQR 122 TP + + ++ + L G + L A + L L ++ R Sbjct: 61 LTPSGKQLLSRTRQLLRDAEGLEKYALSLGEEIGGELRLVAFPTFAPVFLPQLLRRFADR 120 Query: 123 YPQATIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPC 181 +P ++ + D + + +G+ ++ F+ +P ID+ L+ P Sbjct: 121 HPSVSLYCDEMNQVDIVRGLGQGDYELAFTYDLE----------VPEDIDFTPLYRFPPY 170 Query: 182 VWLRKDHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQ 240 + DHP + +L+ + YP + + ++ G +A + Sbjct: 171 AVVAADHPLSERDSVSLEELVAYPMVLLD-WPLSREYFLSIFTHHGLSPIVAHRAKSMDM 229 Query: 241 SLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 + A L P L + L + + + + Sbjct: 230 MRGLVANGFGFSLFNTPLTALESLDGGGLKPLQL-------IDEARPLSMGIACLRGLRL 282 Query: 301 NPKIVWLRETIKN 313 +P + ++ Sbjct: 283 SPAAEAMHRLARD 295 >UniRef50_A0AXF9 Transcriptional regulator, LysR family n=9 Tax=Burkholderia cepacia complex RepID=A0AXF9_BURCH Length = 329 Score = 192 bits (488), Expect = 2e-47, Method: Composition-based stats. Identities = 49/319 (15%), Positives = 103/319 (32%), Gaps = 18/319 (5%) Query: 4 SITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLS 63 + + L L + + R++ AA+ + VT AVS + +L PL V S G++ Sbjct: 21 DRSPMKLKQLDAFLAVAEHRTIRGAARALGVTQPAVSGIVRELEHELGVPLVVRSVKGIA 80 Query: 64 PTPLMVSMEQNLAEWMQMSNLLLDKPHHQT-PRGLKFELAAESPLMMIMLNALSKQIYQR 122 T + ++ D+ +A + + +L + Sbjct: 81 LTDYGSAFAIRARLIVEEIQRTRDEIEQLRLGTTGSVSIAVSPTVALTILPRAFAAFTRD 140 Query: 123 YPQATIKLRN-WDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPC 181 P AT+ + + L + G +D + + S+ P LF Sbjct: 141 LPGATLNVDDALTATDLARLRDGSLDFIVTHQLSNAL------PDPDEFASIPLFRTAFA 194 Query: 182 VWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRE-RTIAMSLPEFEQ 240 V R H +L + + + + ++ G + + P F Sbjct: 195 VVARSRHRLARAR-SLRELVDAHWCVPRYGEGGDDLIRSIFMPFGLDVPKRVVHCPSFAA 253 Query: 241 SLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 +L + +Q D L + P + Q + + L P + ++ + Sbjct: 254 TLGLVSQTDALGVFARP-LAEVERQSRGIVALNLAEPMPA-------LTVAIVMRRHALL 305 Query: 301 NPKIVWLRETIKNLYASMA 319 P + E +K A+++ Sbjct: 306 TPAALHFIECLKGASATVS 324 >UniRef50_D2RM19 Transcriptional regulator, LysR family n=2 Tax=Acidaminococcus fermentans DSM 20731 RepID=D2RM19_ACIFE Length = 299 Score = 192 bits (488), Expect = 2e-47, Method: Composition-based stats. Identities = 40/304 (13%), Positives = 88/304 (28%), Gaps = 23/304 (7%) Query: 12 LLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSM 71 + + TKAA+ +++T +SK++ +L + L+ L+ TP Sbjct: 7 QIRYFITACHYMNFTKAAEELHLTQPGLSKAIRELESQCGAALWERHHNSLALTPAGRVF 66 Query: 72 EQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQATIKLR 131 + ++ L + + L + + + +PQ I Sbjct: 67 LEQARKFQDQYEQLEATARSLGSGEALLRIGLVPMCGNTIFPGLHRALQEAWPQLRIITT 126 Query: 132 NWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPA 190 L + + E+D+ L P VL +++ KDHP Sbjct: 127 EATGPILYSLLDQQEIDLALCV-------TNHLPEAPY--HCRVLKDSRLMLFVHKDHPL 177 Query: 191 L-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQPD 249 + +L P + + T L + + + L Sbjct: 178 ATRSSVDLKDLEDEPLVLFTDQFGQTRYLRRLFAACQVHPHVLHQTSQVFTILEYIRHQA 237 Query: 250 NLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWLRE 309 L + + LVA+P+ + +W++ + P + Sbjct: 238 ALG------FLSEEFAQDEKNLVAIPV------NQIATGHVNFVWNRDPNQFPALKRFLA 285 Query: 310 TIKN 313 ++ Sbjct: 286 FVEE 289 >UniRef50_C6XNZ9 Transcriptional regulator, LysR family n=1 Tax=Hirschia baltica ATCC 49814 RepID=C6XNZ9_HIRBI Length = 293 Score = 192 bits (488), Expect = 2e-47, Method: Composition-based stats. Identities = 52/311 (16%), Positives = 95/311 (30%), Gaps = 25/311 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 + + L C + +E + A+R+N+T VS+ + L PLF + + TP Sbjct: 2 FEFSQLRCFVAVAEEMHFGRGAERLNMTQPPVSRQVQVLERVLGTPLFDRTSRSVKLTPA 61 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNALSKQIYQRYPQA 126 +++S ++ + L L + P Sbjct: 62 GKRFLVEAKHILRISQDAAAIAKRVASGEVGNLAISFTAASGYSYLPHLIDVCCSKLPST 121 Query: 127 TIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + LR D + A+ G+VDIG + + + + + Sbjct: 122 QLILREMITSDQIQALESGQVDIGLLRGRFNL----------KGYEKRRILREKLIAAIP 171 Query: 186 KDHPAL-HQTWNLDTFLRYPHISICWE--QSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 P +T L F I + L+ + E + + L Sbjct: 172 ASDPKASKETLTLQDFHASNFIMYTPQRAGYFHDMLNKHFERANVEPIFTQYMSQIHTML 231 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 + NL A P + + L LP V ++W K+N+ NP Sbjct: 232 SLVHA--NLGAAIVPE-AASVLKFSNVEYRPLELP------SHYPVELHIVW-KKNNDNP 281 Query: 303 KIVWLRETIKN 313 I L + I+ Sbjct: 282 CIPSLLKHIEE 292 >UniRef50_C7I0K1 Transcriptional regulator, LysR family n=1 Tax=Thiomonas intermedia K12 RepID=C7I0K1_THIIN Length = 319 Score = 192 bits (488), Expect = 2e-47, Method: Composition-based stats. Identities = 40/312 (12%), Positives = 86/312 (27%), Gaps = 22/312 (7%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 + + L + KAA+ +++TP AVS + +L + PLF +S Sbjct: 1 MKNATIRQLRVFSAAARHLHFGKAAQEMHLTPPAVSMQIRELESQVGLPLFERQGKSVSL 60 Query: 65 TPLMVSMEQNLAEWMQMSNLLLDKPHHQTP-RGLKFELAAESPLMMIMLNALSKQIYQRY 123 T + + + D + + + S + L + + Y Sbjct: 61 TLTGEYLVVYARKVLATLKDAEDAMARLRGIKAGRLTIGMVST-AQYFVPRLLARFHAEY 119 Query: 124 PQATIKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCV 182 P ++L + + L + E+D+ GR + E + + Sbjct: 120 PHVEVRLSVGNREQLVSHLQNSELDLAIMGRPPRDVAT----------RAEPFAAHPMGI 169 Query: 183 WLRKDHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQS 241 HP + ++ I + L + E + + E Sbjct: 170 IAPPQHPLSTGGPHSATLLTQFNFIIREPGSGTRATFEEYLHQHQMELPLFTEMQSNETI 229 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 N+ ++ + + L L + L + + + Sbjct: 230 KQAVMA--NMGISFLSLHTIDLELRNNL------LTVPSIEGMPLLRRWYAVNSLAKLLS 281 Query: 302 PKIVWLRETIKN 313 P R I Sbjct: 282 PGAEAFRYFILE 293 >UniRef50_Q73ZG9 Putative uncharacterized protein n=2 Tax=Mycobacterium avium RepID=Q73ZG9_MYCPA Length = 305 Score = 192 bits (488), Expect = 2e-47, Method: Composition-based stats. Identities = 47/307 (15%), Positives = 94/307 (30%), Gaps = 26/307 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +DL+ L C + +E + T AA+RI++ S VS + L LF P + T Sbjct: 1 MDLHQLECFIAVAEEGTFTAAAQRIHLAQSGVSAHIKALEREIGQQLFERRPRTVRLTAA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTP-RGLKFELAAESPLMMI--MLNALSKQIYQRYP 124 ++ + T + + + + L L + +P Sbjct: 61 GNALLPYARAALDALAAGRASIDGLTGLLHGRLAIGTITSISPRSIDLPELLAAFHHEHP 120 Query: 125 QATIKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVW 183 + L L I+ G +D+ F+ + + L + Sbjct: 121 GVDLSLVEDTAAMLNRHISNGALDVAFTSLTDEAVA---------GVRMRELHREPVIAI 171 Query: 184 LRKDHPALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 P + L P I++ W L+ L+ G + IA + + + Sbjct: 172 FLPSDPLSPCRKLTLADVADRPLITLPEGSGLRWQLNRALRRAGVQAHIAFEAGDPDVLV 231 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 + A+ + L Q ++ LP+ ++W + + +P Sbjct: 232 ALVAKGLGVGLVPQSALAQS------DHVIGLPV------SDHPPGRLGIIWPEGQAASP 279 Query: 303 KIVWLRE 309 E Sbjct: 280 AARAFVE 286 >UniRef50_Q4KGL9 Transcriptional regulator, LysR family n=15 Tax=Pseudomonas RepID=Q4KGL9_PSEF5 Length = 348 Score = 192 bits (488), Expect = 2e-47, Method: Composition-based stats. Identities = 70/323 (21%), Positives = 116/323 (35%), Gaps = 21/323 (6%) Query: 2 KKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLG 61 + LD+ L+ + ++ SVT ++ + V+ S VS L KLR F+D LF+N+ G Sbjct: 40 SNVLRKLDMQDLMVFIAVYEQSSVTGVSETLCVSQSTVSYCLKKLRNGFEDELFINTRTG 99 Query: 62 LSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGL--KFELAAESPLMMIMLNALSKQI 119 + PT SM ++ ++ NL P F L A +++L L K Sbjct: 100 MRPTYKATSMYNHVLRILESINLCHSGVPAFDPTRQAVTFNLCAPEYFELLILPRLLKGF 159 Query: 120 -YQRYPQATIKLRNWDYDS-LDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFS 177 Y P T+ ++ + D + + G VD+ R ++L Sbjct: 160 DYADLP-VTVNVQKLESDIPAEDLRDGSVDLVICFGPDFHRR-------HADFKSQMLLE 211 Query: 178 DVPCVWLRKDH-PALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLP 236 D K P ++L +F+ H+ SD+ +D L +R I Sbjct: 212 DDLVCVFDKRATPPREPRFSLQSFVERRHVFPTPWTSDSNMVDGWLARQAHKRQIVARSN 271 Query: 237 EFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHK 296 + +L M D LL T PR Q + E+ + W + Sbjct: 272 SYSAALKMITGTDFLL--TLPRRIQALLANEAV------FNHCEAPSGLPGFSLDMQWSQ 323 Query: 297 RNSHNPKIVWLRETIKNLYASMA 319 + W RE I + A Sbjct: 324 HTDQDSAQTWFREQIVKVCAEQG 346 >UniRef50_Q0S956 Transcriptional regulator, LysR family protein n=3 Tax=Actinomycetales RepID=Q0S956_RHOSR Length = 299 Score = 192 bits (488), Expect = 2e-47, Method: Composition-based stats. Identities = 41/315 (13%), Positives = 97/315 (30%), Gaps = 27/315 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L + +E + T+AA+R++++ S +S + +L L S + T Sbjct: 1 MELRQLEYFVAVAEEANFTRAAERVHISQSGISAQIRQLEHDLGATLIDRSSRTATLTAA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + + ++ + + + + + L + +P Sbjct: 61 GEAALVHARAALASADAMRQAVDDVNQLIRGRLVVGMVTACTVKPLFDALSAFHVAHPGI 120 Query: 127 TIKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 I L D ++ + G +D+ G ++ P +D + S+ + Sbjct: 121 EITLTEDSSDRLVERVRAGAIDLALVGT---------ATAPPDGLDAFPIISEGLVAAVP 171 Query: 186 KDHPALHQ-TWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 HP + L + + + D G IA+ + + Sbjct: 172 PGHPLAGRSRVTLAELGDHAIVCMPTGTGIRTVFDQACAAAGLRPDIALQASAPDAVADL 231 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 A + L +A ++ L A+ + L+W + Sbjct: 232 AIR--GLGVAILSES---MATDYRGRLTAV-----TLDDVDIPAVLALVW-----KSLAG 276 Query: 305 VWLRETIKNLYASMA 319 LRE + + + Sbjct: 277 PALRELVLHTRRTFG 291 >UniRef50_Q391W5 Transcriptional regulator, LysR family n=3 Tax=Burkholderiales RepID=Q391W5_BURS3 Length = 315 Score = 192 bits (488), Expect = 2e-47, Method: Composition-based stats. Identities = 64/313 (20%), Positives = 124/313 (39%), Gaps = 21/313 (6%) Query: 7 TLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTP 66 +DLNL+ LQ ++ + +KAA + VT A+S++L +LR F D LFV S L PTP Sbjct: 14 RIDLNLVATLQAILDTGNASKAAIALGVTQPAISQNLRRLREHFGDELFVRSGNMLKPTP 73 Query: 67 LMVSMEQNLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQIYQRYP 124 M++++ +A ++ ++L P P +F ++ +L +++ + P Sbjct: 74 RMLALQPVIARLLRDLDMLSRPPDGFDPATAEQEFIVSLSEVAEFAVLPSVAAEFALHAP 133 Query: 125 QATIK-LRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVW 183 + I+ +R L + +GEVD + L+ ++ + L Sbjct: 134 RCRIRGIRVHHSQLLSMLEQGEVD----------LAAGSLAGAAPSLRQQRLAEHRMVCM 183 Query: 184 LRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 + L ++ H+S+ T + LQ G R S+ + Sbjct: 184 VSAQGKWATAPLTLQDYIDGRHVSVRRIADTTDPISERLQATGIHRNAVASVSSDFVAAQ 243 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 + D + P + L + L +P + ++WH+R + Sbjct: 244 TVVKTDAICTVGEPA-GRQLTALFPVRLHPVPFEVGTLTSR-------MIWHERFQRDAS 295 Query: 304 IVWLRETIKNLYA 316 +WLR+ ++ Y Sbjct: 296 HIWLRKLVETAYR 308 >UniRef50_C9YD50 RuBisCO operon transcriptional regulator n=1 Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9YD50_9BURK Length = 326 Score = 192 bits (488), Expect = 2e-47, Method: Composition-based stats. Identities = 49/326 (15%), Positives = 101/326 (30%), Gaps = 33/326 (10%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 + L L L + + S ++AA+ +NVT AVS + +L L V + + Sbjct: 19 HRLRNLTLRQLRLFEAVATHLSYSRAAEVMNVTQPAVSMQIQQLETEVGLQLLVKTGRKV 78 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG--------LKFELAAESPLMMIMLNA 114 S + M + + L + P L A Sbjct: 79 SLSQAGEEMLRQCRRILNQVLLAEESMGAFHPAEGGHGGLLHLGVV-----SSAHYFAPA 133 Query: 115 LSKQIYQRYPQATIKL-RNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYE 173 L +R+P KL + L + ++D+ +G ++ E Sbjct: 134 LLMAFAERWPGVKFKLTVDRRETILAMLQGHQLDVAIAGYPPSEA----------DVEAE 183 Query: 174 VLFSDVPCVWLRKDHPALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIA 232 + C+ +HP + + D P I + ++++Q + ++ Sbjct: 184 TFAQNPHCIVASANHPLARKRRVHWDALRNEPFIFREPGSATRHFFEHLIQAQSLQVRLS 243 Query: 233 MSLPEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTL 292 M L E + ++ Q+ A L + + + + L Sbjct: 244 MELSGNETIKQAVIA--GMGISFLS------AHTFQVEFEAGKLAVLQMEDMPKMLDWCL 295 Query: 293 LWHKRNSHNPKIVWLRETIKNLYASM 318 L + +S + RE + A++ Sbjct: 296 LHRRDSSLSGVNQAFREFVLTEGAAL 321 >UniRef50_A6EZR5 Transcriptional regulator, LysR family protein n=1 Tax=Marinobacter algicola DG893 RepID=A6EZR5_9ALTE Length = 306 Score = 191 bits (487), Expect = 2e-47, Method: Composition-based stats. Identities = 63/319 (19%), Positives = 129/319 (40%), Gaps = 25/319 (7%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 ++ +DL L LQ L++E ++++ A ++ VT AVS L KLRA F+D LF+ S G+ Sbjct: 2 NALNRVDLKQLRTLQCLLREGNLSRVADQLGVTQQAVSDQLKKLRATFNDRLFIRSGNGV 61 Query: 63 SPTPLMVSMEQNLAEWMQMS-NLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQ 121 +PT ++ L + LL + +++ +L L +++ + Sbjct: 62 TPTAYARTLGPKLDLILNAVGELLEQDEFNPATTTRTITISSTDLEQKTILPFLMQRLRR 121 Query: 122 RYPQATIKLRNWD-YDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 P + ++ + + + + G VD+ + + P S L L+S+ Sbjct: 122 EAPGLRLAVKKLELDEMANDLLDGSVDLVLTNPKFAPPSYPSL----------TLYSERY 171 Query: 181 CVWLRKDHPALHQTWNLDTFLRYPHISICW-EQSDTWALDNVLQELGRERTIAMSLPEFE 239 K + A+ T ++ P + + T A+ ++ G R +S+P F Sbjct: 172 VCVAGKANEAVRSTMSVAEIASMPQVVVSPSRGDFTGAVHRWFEDQGHPRQAMLSVPTFT 231 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 + ++ D + P + L + L + +WH+R+S Sbjct: 232 AAKATISETDLVG--FIPSRLLPDDSLQPIEL----------NAEIPGFDVIAVWHQRSS 279 Query: 300 HNPKIVWLRETIKNLYASM 318 +P +W+R+ + + M Sbjct: 280 QDPLNIWIRDLLLQVSNRM 298 >UniRef50_P03030 Transcriptional activator protein lysR n=101 Tax=Proteobacteria RepID=LYSR_ECOLI Length = 311 Score = 191 bits (487), Expect = 2e-47, Method: Composition-based stats. Identities = 43/312 (13%), Positives = 93/312 (29%), Gaps = 23/312 (7%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 + ++L + +M S+T+AA ++ + VS+ LA+ LF L P Sbjct: 1 MAAVNLRHIEIFHAVMTAGSLTEAAHLLHTSQPTVSRELARFEKVIGLKLFERVRGRLHP 60 Query: 65 TPLMVSMEQNLAEWMQMSNLLLDKPHHQTP-RGLKFELAAESPLMMIMLNALSKQIYQRY 123 T + + + + + ++ R + +A L L + RY Sbjct: 61 TVQGLRLFEEVQRSWYGLDRIVSAAESLREFRQGELSIACLPVFSQSFLPQLLQPFLARY 120 Query: 124 PQATIKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCV 182 P ++ + + L + ++ D+G + P + L S Sbjct: 121 PDVSLNIVPQESPLLEEWLSAQRHDLGLTETLHT----------PAGTERTELLSLDEVC 170 Query: 183 WLRKDHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQS 241 L HP + D F +IS+ S LD + E +R + + Sbjct: 171 VLPPGHPLAVKKVLTPDDFQGENYISLSRTDSYRQLLDQLFTEHQVKRRMIVETHSAASV 230 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 M + ++ L + + +L+ + Sbjct: 231 CAMVRA--GVGISVVNPLTALDYAASGLVVRRFSIAVP--------FTVSLIRPLHRPSS 280 Query: 302 PKIVWLRETIKN 313 + ++ Sbjct: 281 ALVQAFSGHLQA 292 >UniRef50_A4FJ36 LysR-family transcriptional regulator n=2 Tax=Actinomycetales RepID=A4FJ36_SACEN Length = 287 Score = 191 bits (487), Expect = 2e-47, Method: Composition-based stats. Identities = 47/307 (15%), Positives = 88/307 (28%), Gaps = 25/307 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L +++ S T AA+ ++V SA+S S+ KL PLF + + T Sbjct: 1 MELRQLEHFLAVVRSGSFTGAAREVHVVQSALSTSIRKLETELGAPLFERTTRRVLLTEA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTP-RGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 ++E + + + + L + L +R+P Sbjct: 61 GRALEPMAHRIVADVVAARGEVATVAGLSRGRVAIGTIQTLTEVDLPGELGTFQRRHPGV 120 Query: 127 TIKLRN-WDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 I +R D + A+ GE+D+ L + + + Sbjct: 121 RIHVRQGLVPDLMAAVGNGELDLA---------YLAPEGPLAEELVSFAQWRQKLVLLGY 171 Query: 186 KDHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 H + L P + + + G R + + Sbjct: 172 PGHRLAQRRRVRLAELDGEPFVDFS-GSGLQDMIGRRFADAGVRRDRVCEATHVPLLVEL 230 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 A L ++ P + LP +Q L P L NP Sbjct: 231 VAA--GLGVSIVPEPVAARSG----------LPHARIEQPSLSRPIHLAGRGAEPVNPAA 278 Query: 305 VWLRETI 311 L + + Sbjct: 279 RALLQHL 285 >UniRef50_C9PE36 Probable transcription regulator protein n=2 Tax=Vibrio RepID=C9PE36_VIBFU Length = 311 Score = 191 bits (487), Expect = 2e-47, Method: Composition-based stats. Identities = 66/310 (21%), Positives = 126/310 (40%), Gaps = 19/310 (6%) Query: 9 DLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLM 68 + LL L L++ R++T AA+R+NVT A+SK+L +R F DP+ + + T Sbjct: 3 NYKLLPALMALLETRNLTDAARRLNVTQPAMSKALRLIRDEFQDPILIRDGQQFTLTQRG 62 Query: 69 VSMEQNLAEWMQMSNLL-LDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQAT 127 +++ L + + L L + F LA S + M +L AL ++Y++ PQA Sbjct: 63 EQLKERLPALLFQLDQLYLPPQANIQHCDRSFRLAFNSFISMDILPALCAELYEKAPQAG 122 Query: 128 IKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKD 187 I+ W L + D+ L ++P + + L SD + + Sbjct: 123 IQTSLWQNAPLSELGETNFDL----------LGTLAVTVPENLYGKRLASDHYVICCCQT 172 Query: 188 HPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQ 247 + +++ + HI + +T +DN+ ++ ++R I +LP +L Sbjct: 173 NEIATHGMSMEHYFSARHILVSDLHEETRQVDNLFRQHKKQRRIFATLPSLRLALETVIG 232 Query: 248 PDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWL 307 L + Y + + L +++ P + LLWH + ++ + W Sbjct: 233 THCL-VTVPLHIAAQYAKRYPLAVLSAPFELATHN-------YYLLWHAKFQNDDEHRWF 284 Query: 308 RETIKNLYAS 317 RE Sbjct: 285 RELCFAHLQR 294 >UniRef50_Q4ZT12 Regulatory protein, LysR:LysR, substrate-binding n=3 Tax=Pseudomonas RepID=Q4ZT12_PSEU2 Length = 313 Score = 191 bits (487), Expect = 2e-47, Method: Composition-based stats. Identities = 51/321 (15%), Positives = 109/321 (33%), Gaps = 29/321 (9%) Query: 2 KKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLG 61 K + + + + Q S +KAA +N++PSA++ + +L W L SP Sbjct: 14 KNKMKN-SIQHIRAFLSVAQTGSFSKAAATLNLSPSALTVQIQQLEDWLGVALLERSPRH 72 Query: 62 LSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKF-ELAAESPLMMIMLNALSKQIY 120 + T + + + + + ++ +AA L +L + K Sbjct: 73 VCLTGAGQNALLPMEKLLLDLDNIVSAARDIAASRRGLITIAALPSLCSGVLPTVLKTFR 132 Query: 121 QRYPQATIKLRNWDYDSLD-AITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 +R+P ++LR+ +D + EVD G + +++ + D Sbjct: 133 ERFPGVEVRLRDVVAQRIDTLVMEREVDFGLGVQARPT----------HGLEFNAILEDR 182 Query: 180 PCVWLRKDHPALHQ-TWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEF 238 C++ +DHP + L+ +P + E S ++ V + + + Sbjct: 183 LCLFAPEDHPLAKRCAVRLNEIAVFPIVLTGRESSVRDLVERVFADEQLPLSAGLEANYM 242 Query: 239 EQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRN 298 L + Q + P + L +P+ + L+ Sbjct: 243 STVLALVRQ--GQGITLLPESA----DDGRGDLSKVPVDHP-----GVVRQIGLITRSEQ 291 Query: 299 SHNPKIVWLRETIKNLYASMA 319 + LRE K+ ++A Sbjct: 292 TR----GRLRERAKSYAKALA 308 >UniRef50_Q2BJH5 LysR-family transcriptional regulator n=1 Tax=Neptuniibacter caesariensis RepID=Q2BJH5_9GAMM Length = 312 Score = 191 bits (487), Expect = 2e-47, Method: Composition-based stats. Identities = 47/323 (14%), Positives = 108/323 (33%), Gaps = 28/323 (8%) Query: 1 MKKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPL 60 M +I+ + L + S T+AA+ +++T S ++ ++ +L L + Sbjct: 1 MTNNIS---IRHLRAFVEIASCGSFTRAAENLHLTQSTLTATIKQLEDQACLKLLDRTTR 57 Query: 61 GLSPTPLMVSMEQNLAEWMQMSNLLLDKPHH-QTPRGLKFELAAESPLMMIMLNALSKQI 119 + T + + + + + H T + + +AA ++ +L + K Sbjct: 58 RVLLTGEGETFLPVAEKLISDFDTAFNDLHATATQQQGQIGVAASPSMISRVLPPIIKAY 117 Query: 120 YQRYPQATIKLRNWDYDSLDA-ITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSD 178 + P+ I LR+ + ++ + EVD G G S+ + Y + D Sbjct: 118 HLDSPKIGIYLRDDNASGIEQRVLENEVDFGLGGNHSNQP----------ELSYTPVLKD 167 Query: 179 VPCVWLRKDHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTI---AMS 234 V + H + D P + + + L + +E + + + Sbjct: 168 RYGVVVPSGHHLAEKAIIRWDEISSLPQLHLTEDTGTRSQLRKLEKENDLDLQLQGAGIE 227 Query: 235 LPEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLW 294 + + L ++ P +L + L P L ++ Sbjct: 228 VSTPAGLAELIKT--GLGISLLPSLAASTRSFDELHFIPLDEP-------ALFREICIIS 278 Query: 295 HKRNSHNPKIVWLRETIKNLYAS 317 K S +P L + I +++ Sbjct: 279 RKGRSLSPAAESLLQMINEHFSA 301 >UniRef50_C2ANJ1 Transcriptional regulator, COG0583 n=1 Tax=Tsukamurella paurometabola DSM 20162 RepID=C2ANJ1_TSUPA Length = 309 Score = 191 bits (487), Expect = 2e-47, Method: Composition-based stats. Identities = 44/304 (14%), Positives = 88/304 (28%), Gaps = 23/304 (7%) Query: 13 LLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSME 72 L+ L + +T AA ++++ +S+SLA++ PLF L Sbjct: 15 LVRFITLAETAHMTDAAALLHISQPTLSRSLARMETDLGTPLFDRRHGRLVLNASGEIYL 74 Query: 73 QNLAEWMQMSNLLLDKPHHQ-TPRGLKFELAAESPLMMIMLNALSKQIYQRYPQATIKLR 131 + + P LA + M+ L P+ T +L Sbjct: 75 DHARRAHAELEAARAQIADLKNPSQGTIRLAFLHSFGVAMVPQLVSAFRACEPRVTFELS 134 Query: 132 NWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPA 190 + ++ D + E D+ + + +++L + + HP Sbjct: 135 QFAAGTITDLVLADEADLAIVSPRPTTSA----------VAWQLLTVQRLALAVPSGHPL 184 Query: 191 L-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQPD 249 + +L I++ E L+ G IA E + A Sbjct: 185 ANRSSVHLSEASDADFITMHPEYGLRRILEERCAAAGFRPRIAFESSESFTVAGLVAA-- 242 Query: 250 NLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWLRE 309 L +A P + + PL+ L ++W + + R+ Sbjct: 243 GLGVALLP--------MDRNPLLPSGLTLVPMAGPAPTREVGIIWRPDVALPRAVRSFRD 294 Query: 310 TIKN 313 Sbjct: 295 HAIE 298 >UniRef50_UPI0001B4FA16 LysR family transcriptional regulator n=1 Tax=Streptomyces hygroscopicus ATCC 53653 RepID=UPI0001B4FA16 Length = 318 Score = 191 bits (487), Expect = 2e-47, Method: Composition-based stats. Identities = 42/294 (14%), Positives = 94/294 (31%), Gaps = 16/294 (5%) Query: 12 LLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSM 71 L + ++ S AA+R+ TPSAVS+ ++ + LF SP + PTP + + Sbjct: 7 QLQAICEVVAAGSFRSAAQRLGYTPSAVSQQISTIERALGVALFERSPRSVRPTPAGLQL 66 Query: 72 EQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQIYQRYPQATIKL 130 + + + D+ + L + ++ + + P+ ++ Sbjct: 67 ARRAGRLLADLSATEDEMRAYAAAERGRLRLGSFWSAGFRLVPTVLTGFLRDRPEVDVRY 126 Query: 131 RNWDYDS-LDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHP 189 D + A+ G +D+ + S P +D+ ++ + V L HP Sbjct: 127 EEGDPQVTVPAVVEGRLDLAVIFEY-----GVVPHSWPDGLDHTLVREEPLYVLLPAGHP 181 Query: 190 ALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQP 248 + L IS + L ++ G + ++ + Q Sbjct: 182 LAGRRHIRLADLRDERWISYHEDTDAARCLRHICAAGGFLPEVLFRTNDYNLPYELVRQG 241 Query: 249 DNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 + +A + L ++ ++ R + +P Sbjct: 242 LGVAIAPELAIMDTSASPDASGTHLVRLTDPAHTRR--------VYATRRTSDP 287 >UniRef50_A1W6X9 Transcriptional regulator, LysR family n=19 Tax=Burkholderiales RepID=A1W6X9_ACISJ Length = 310 Score = 191 bits (487), Expect = 2e-47, Method: Composition-based stats. Identities = 43/318 (13%), Positives = 87/318 (27%), Gaps = 32/318 (10%) Query: 7 TLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTP 66 + + L +R+ T+AA + +++ A S + L LF S +S T Sbjct: 2 NVSTRQIDAFLALAAQRNFTRAAAQCHLSQPAFSALIRALEDDLGLRLFDRSTRHVSLTA 61 Query: 67 LMVSMEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQIYQRYPQ 125 + + + L + +A L L + ++P Sbjct: 62 EGENFHASALRIRAEVDAALATLRDAALLRRGRVSVALLPSLAAGWLPGVLAGFRAQHPG 121 Query: 126 ATIKLRN-WDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 + + + ++ + G+ D + + + E D + Sbjct: 122 VELDIADVLSEPCIERVATGKADFALAAIRADTP----------ELQAEPFCEDGFHLVC 171 Query: 185 RKDHPALHQTWN---------LDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSL 235 R DHP Q +P I + S L+ M + Sbjct: 172 RADHPLARQPLPAGRRSAAAQWRALAEWPFIHLARHSSVRQYLEAAFHPH--AMRTLMEV 229 Query: 236 PEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWH 295 + + M L ++ P ++ Q L L LP L L+ Sbjct: 230 EQLATVMGMVRA--GLGISVVPTLTLFHFQQEGLATRPLALP-------GLTRQIYLVRR 280 Query: 296 KRNSHNPKIVWLRETIKN 313 + + L + Sbjct: 281 RDRGLSVAAQALYARVMQ 298 >UniRef50_A4WZV0 Transcriptional regulator, LysR family n=1 Tax=Rhodobacter sphaeroides ATCC 17025 RepID=A4WZV0_RHOS5 Length = 302 Score = 191 bits (487), Expect = 2e-47, Method: Composition-based stats. Identities = 44/307 (14%), Positives = 86/307 (28%), Gaps = 22/307 (7%) Query: 10 LNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMV 69 L L + + S T+AA+ +++T AV + +L L L T Sbjct: 5 LRQLQVFASVARHASYTRAAEELHLTQPAVFAQVKQLEEALAVVLIERIGKRLHLTEAGR 64 Query: 70 SMEQNLAEWMQMSNLLLDKPHHQTP-RGLKFELAAESPLMMIMLNALSKQIYQRYPQATI 128 ++E E ++ L + R + ++A S + L L + P + Sbjct: 65 AVEATARETLEGIERLEMQLADLQGLRRGRLKIAIVSTV-QYFLPRLLGEFCTLNPGIEV 123 Query: 129 KLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKD 187 L + + + E D+ G+ + + + + D Sbjct: 124 ALTVTNRQTVIARLAANEDDLCILGQPPEGL----------DVVATPVAQNPILLLAPAD 173 Query: 188 HPALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAA 246 HP + P I A + + G + M L E A Sbjct: 174 HPLAGARAVPFAELAEAPFILREPGSGTRAAAERFFADCGVRPRVRMELGSNEAIKEAVA 233 Query: 247 QPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVW 306 L + + LVAL + Q L + + + + + Sbjct: 234 AGLGLAILSQDTMAVEAATR---RLVALDV-----QGFPLMRVWNVAYPRGKHLSVAAAA 285 Query: 307 LRETIKN 313 + Sbjct: 286 FLAHLTQ 292 >UniRef50_B0PCN4 Putative uncharacterized protein n=2 Tax=Bacteria RepID=B0PCN4_9FIRM Length = 298 Score = 191 bits (487), Expect = 3e-47, Method: Composition-based stats. Identities = 50/312 (16%), Positives = 94/312 (30%), Gaps = 22/312 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 + L L + + +VT+AA+ +N++ +S L L PLF L TP Sbjct: 1 MTLKQLEYFLEIARLGNVTRAAQSLNISQPPLSLQLKSLEDELGTPLFRRDKRHLEITPA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRGL-KFELAAESPLMMIMLNALSKQIYQRYPQA 126 +++ + + + H + +A + +L L + + Y Sbjct: 61 GKLLQERAQAILALLDETTGDIHALSTEKQITLRIATIGSVNNRLLPNLIARFSRDYFYV 120 Query: 127 TIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 ++ L+ +T G+VD GF + + A+ SD + Sbjct: 121 NFRVIEGRTEHVLEHVTSGDVDFGFVREPFNTSHFRSVLIHDPALA--PGQSDHFVTIAQ 178 Query: 186 KDHPAL------HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFE 239 T +D P I Q + ++ G I E Sbjct: 179 PQFYDAYYEGDSRDTIEIDELKDKPLII---HQRYREMILGACRKRGFNPYIICENDEIH 235 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 SL A + +A AP + L + L L+W+ Sbjct: 236 SSLSWARA--GIGIAIAPYTSAILSIDPGLVIRRLTFTAFIPW-------VRLVWNPSCQ 286 Query: 300 HNPKIVWLRETI 311 + + + I Sbjct: 287 LSSEALAFMNMI 298 >UniRef50_C7RSN5 Transcriptional regulator, LysR family n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RSN5_9PROT Length = 300 Score = 191 bits (487), Expect = 3e-47, Method: Composition-based stats. Identities = 57/315 (18%), Positives = 112/315 (35%), Gaps = 25/315 (7%) Query: 11 NLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVS 70 L + + S TKA + +++T AV+ + +L F+ LF ++ T Sbjct: 4 RRLQVFHAVAKHLSFTKAGEALHMTQPAVTFQIKQLEERFNTRLFDRGGGRIALTQAGEL 63 Query: 71 MEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQIYQRYPQATIK 129 + + +S L + T + + A + + ML + + RYPQ + Sbjct: 64 VLDYAERILGLSADLDLRVAEMTGQMSGSLLVGASTTIAEFMLPPILGEFNVRYPQVRAR 123 Query: 130 LRNWDYDSLD-AITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDH 188 L + +++ AI +DIG + S + EV D V H Sbjct: 124 LTVANSEAISNAIAAHTLDIGLVESLVNHPS----------LQCEVCGDDELQVICTPTH 173 Query: 189 PALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRER---TIAMSLPEFEQSLFM 244 P +T + + + + I+ D+ L+ G E M L E + Sbjct: 174 PLAQRTDVDARSLMAHDFIAREPGSGTREVTDDYLRACGVEPAQIKTLMELASPEALKGV 233 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 A L + R + LVA+PL + +L+ +L++ K + + Sbjct: 234 VAT--GLGFSIVSRASFEKERQLG-SLVAIPL------RPRLKRTLSLVYQKERFRSKVV 284 Query: 305 VWLRETIKNLYASMA 319 + + +N ++ Sbjct: 285 LTFVDFARNKLRELS 299 >UniRef50_C9RA29 Transcriptional regulator, LysR family n=1 Tax=Ammonifex degensii KC4 RepID=C9RA29_AMMDK Length = 295 Score = 191 bits (487), Expect = 3e-47, Method: Composition-based stats. Identities = 43/309 (13%), Positives = 93/309 (30%), Gaps = 24/309 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 + L+ L L+ + S + AAK +++T AVSK +A L A L ++ T Sbjct: 1 MKLSWLKTFVLIADKGSFSLAAKELDLTQPAVSKHIALLEAHLGVKLIDRDQRQVTLTEA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 ++ ++ + + + A + +L L ++ +RYPQ Sbjct: 61 GQALLPYARTIIKTLEEAEQAVRNLSASVRGTLNIGASTIPGHYVLPQLIRRFRERYPQV 120 Query: 127 TIKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + L D + + ++ +G G + ++ +D + L Sbjct: 121 QVNLEIADTEKVWQQVLEHKICLGAVGAPPSSPA----------LEAVPFATDEIVLVLP 170 Query: 186 KDHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRER---TIAMSLPEFEQS 241 HP + L+ + + ++ L++ G + E Sbjct: 171 TPHPLAGKEVIPLELLPQLELVGREKGSGTRQTVEERLRQKGFPPERLRVVAEFSTTEAV 230 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 L L A R+ + L + E L++ + + Sbjct: 231 LAAVEA--GLGGAFVSRWAAESRRHKG------NLCICRLEGISFERKLYLVYSRHRTLP 282 Query: 302 PKIVWLRET 310 Sbjct: 283 HLARLFLNF 291 >UniRef50_B8GM38 LysR family transcriptional regulator n=4 Tax=Proteobacteria RepID=B8GM38_THISH Length = 337 Score = 191 bits (487), Expect = 3e-47, Method: Composition-based stats. Identities = 52/306 (16%), Positives = 104/306 (33%), Gaps = 25/306 (8%) Query: 10 LNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMV 69 L L Q S+++AA+R+ V+ +VS + L + LF + T Sbjct: 14 LRQLRAFCQAAQTGSISRAAERLCVSQPSVSLLIKGLEQDLNVLLFERRGPRIELTAAGQ 73 Query: 70 SMEQNLAEWMQMSNLL--LDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQAT 127 + + ++ + L + +LAA ++ +L K+ +RYP Sbjct: 74 VLLETSLPLVEGMDHLPEVFAARLGEAGQGSLDLAAGESTILYLLPEYVKRFSERYPAVK 133 Query: 128 IKLRNWD-YDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRK 186 + L N D L + GEVD + +P + Y +F+ P + Sbjct: 134 LHLHNVTGRDGLKMLRAGEVDFAVGS----------MIDVPEDMHYHPIFTYEPMLITAL 183 Query: 187 DHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMA 245 +HP + +L+ I S +D V + G + + + +E Sbjct: 184 NHPLAKKKKVSLEDVSPCGLILPPRHLSTWSIVDLVFHQHGLDYHVVLEAGGWEVIKKFV 243 Query: 246 AQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIV 305 ++ ++ C + L A+PL + ++ K +P+ Sbjct: 244 E--LDMGVSIVTSICLTGEE----KLAAIPL-----SDYFPRRTYGVVMRKGKFLSPQAC 292 Query: 306 WLRETI 311 E + Sbjct: 293 SFLELM 298 >UniRef50_Q98A96 Nitrogen assimilation control protein n=3 Tax=Mesorhizobium RepID=Q98A96_RHILO Length = 316 Score = 191 bits (487), Expect = 3e-47, Method: Composition-based stats. Identities = 42/313 (13%), Positives = 103/313 (32%), Gaps = 21/313 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +D+ L +++ S TKAA +NV SA+S + +L F L V G+S T Sbjct: 9 VDIRQLRYFVGVVEAGSFTKAAATLNVAQSALSLHVRQLEEGFGTQLLVRERTGVSVTAS 68 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + ++ L + + + + S ++ L + + P+ Sbjct: 69 GDKLLERARNILKEIRLTEAELTNTAASPAGEVTIGIPSGAARVLSGPLLESVRAELPRV 128 Query: 127 TIKLRN-WDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 ++K+ + + G ++ R + VL + C+ + Sbjct: 129 SLKMIEGMTGPLEEWMAAGRFNLAVLYRTADSVG-----------RMTVLAREDLCLVVP 177 Query: 186 KDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMA 245 P ++ +L +P + ++ +V+ + G + + + M Sbjct: 178 SGEPPFEESISLADLHAFPLAVPMRNNNVRRSVADVVAQHGCALDVKFEVDSLSTIINMV 237 Query: 246 AQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIV 305 + + AP Q + V + + L + ++ + + Sbjct: 238 IEGKAHSI-LAPSAVQKEASQGLVRTV-------KIVDPVITRSVVLAVNPKDERSAAVS 289 Query: 306 WLRETIKNLYASM 318 +R+ I + + Sbjct: 290 AVRKLIPKVAREL 302 >UniRef50_C3JX55 HTH-type transcriptional regulator CynR n=2 Tax=Rhodococcus erythropolis RepID=C3JX55_RHOER Length = 291 Score = 191 bits (487), Expect = 3e-47, Method: Composition-based stats. Identities = 41/312 (13%), Positives = 101/312 (32%), Gaps = 23/312 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L + + ++R ++AA R++V+ SA+S + L LF + + T Sbjct: 1 MELRHIRYALAVAEDRHFSRAASRLHVSQSALSAQIRDLEKELGVELFNRNSRNVGLTAA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQAT 127 E + + L+ ++ ++ + + + + + +R+P Sbjct: 61 GEVFVARSREVLGAVSRLVSDVSARSNEQVRLTVGTITSAGRVDVGRALADLTRRHPAIN 120 Query: 128 IKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRK 186 I R + + + + + G +D+G G LP + L+S+ ++ Sbjct: 121 ITARPYGSEVVIEGVRSGAIDVGIVG--------LAAGRLPKSFAAAPLWSEPTAAFVAP 172 Query: 187 DHPALHQ-TWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMA 245 DHP + L+ + + D E R + + + Sbjct: 173 DHPFAQASSIRLEDLRDHTLVDFASGSEARVQTDQAFAESQVPRGKTLEANSVDLICSLT 232 Query: 246 AQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIV 305 A + L +++L +P+ P + + + Sbjct: 233 ANGLGVGL-LPQSMSALHSELACIPITDAPHRIVHAITEP------------THSSALAR 279 Query: 306 WLRETIKNLYAS 317 E + +A+ Sbjct: 280 EFVELLAAQFAT 291 >UniRef50_P42722 HTH-type transcriptional regulator cfxR n=9 Tax=Betaproteobacteria RepID=CFXR_RALEH Length = 317 Score = 191 bits (487), Expect = 3e-47, Method: Composition-based stats. Identities = 36/321 (11%), Positives = 85/321 (26%), Gaps = 22/321 (6%) Query: 1 MKKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPL 60 M + L L L + + S +AA+ +++T AVS + +L + LF Sbjct: 1 MSSFLRALTLRQLQIFVTVARHASFVRAAEELHLTQPAVSMQVKQLESVVGMALFERVKG 60 Query: 61 GLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQ-TPRGLKFELAAESPLMMIMLNALSKQI 119 L+ T + + + + + + S L Sbjct: 61 QLTLTEPGDRLLHHASRILGEVKDAEEGLQAVKDVEQGSITIGLIST-SKYFAPKLLAGF 119 Query: 120 YQRYPQATIKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSD 178 +P +++ + + L + +D+ GR E + + Sbjct: 120 TALHPGVDLRIAEGNRETLLRLLQDNAIDLALMGRPPRELDA----------VSEPIAAH 169 Query: 179 VPCVWLRKDHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPE 237 + HP + ++L + + + ++ ++L Sbjct: 170 PHVLVASPRHPLHDAKGFDLQELRHETFLLREPGSGTRTVAEYMFRDHLFTPAKVITLGS 229 Query: 238 FEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKR 297 E + L + L L + + +E + + Sbjct: 230 NETIKQAVMAGMGISLLSLHTL--------GLELRTGEIGLLDVAGTPIERIWHVAHMSS 281 Query: 298 NSHNPKIVWLRETIKNLYASM 318 +P R + A Sbjct: 282 KRLSPASESCRAYLLEHTAEF 302 >UniRef50_UPI0001BCC5DA LysR family transcriptional regulator n=1 Tax=Aeromicrobium marinum DSM 15272 RepID=UPI0001BCC5DA Length = 315 Score = 191 bits (487), Expect = 3e-47, Method: Composition-based stats. Identities = 67/306 (21%), Positives = 116/306 (37%), Gaps = 19/306 (6%) Query: 15 CLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSMEQN 74 LM E SVT+AA+R+++ A+S SLA+LR +FDDPL V L+PT + + Sbjct: 20 AFDALMAESSVTRAAERMSIGQPAMSASLARLRKFFDDPLLVRQGRSLAPTNRALELVAP 79 Query: 75 LAEWMQMSNLLLDKPHHQTP--RGLKFELAAESPLMMIMLNALSKQIYQRYPQATIKLRN 132 + E + + P F + A ++++ L L + + P ++ Sbjct: 80 IREALDGLESTIRAGREFDPTTSSRTFTVMASDYVLLMFLGPLLSDLRREAPHVRFEIFP 139 Query: 133 WDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPALH 192 D+ ++ R ++D+ E + +LF+D + +DHP + Sbjct: 140 VTRDAAPSVVRSQLDLLIYPDELVEDEPLV--------RSRMLFTDRLVCAVARDHPDVG 191 Query: 193 QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQPDNLL 252 F P S D LQ++G ER +A+ F + + Sbjct: 192 DVMTEHQFRTLPS-VSFSSSSTATISDMRLQQVGYERPLAIEAQSFVVQPLLLPGTTMMA 250 Query: 253 LATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWLRETIK 312 L R +Y+ L L+ P+ ++ W R +P WLR + Sbjct: 251 L-LPERLARYFESRISLRLMEPPVELSPLRE-------AAFWSARADADPAHRWLRRRMV 302 Query: 313 NLYASM 318 A M Sbjct: 303 EAAARM 308 >UniRef50_Q0S6C8 Transcriptional regulator, LysR family protein n=3 Tax=Rhodococcus RepID=Q0S6C8_RHOSR Length = 302 Score = 191 bits (487), Expect = 3e-47, Method: Composition-based stats. Identities = 46/314 (14%), Positives = 101/314 (32%), Gaps = 28/314 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +++ + + +E + +AA+ +++ AVS+ + +L LF + + T Sbjct: 1 MEIRWMKSFVAVAEELNYGRAAEVLHIAQPAVSQQVQQLEKRLGVKLFDRTTRSVRLTAA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 Q + + +D P + + L++L++ + +RYP Sbjct: 61 GERFLQPCKDALAGIVRAVDAAVIADPAVEGRVRVGFSGAYGQTELSSLARSVRRRYPLI 120 Query: 127 TIKLR--NWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 + L LD I G++D+G + + + L Sbjct: 121 DLVLEGATVSGQILDEIWEGQLDLGIVSDAV----------SHPHVLTRQISVEYLSALL 170 Query: 185 RKDHPAL-HQTWNLDTFLRYPHISICW--EQSDTWALDNVLQELGRERTIAMSLPEFEQS 241 DHP ++ +L ++ + L ++ G I + Sbjct: 171 PSDHPLAERKSIDLAELRDETFVANPAATGSTLRRDLLAACRDAGFTPNIVQETTDGIVL 230 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 + A + +A P Q Y +V +PL + EV L W + Sbjct: 231 TALVAA--GVGVALVPGDVQTYPN----RVVLVPLD-----AGRYEVRAALAW-SDRPVS 278 Query: 302 PKIVWLRETIKNLY 315 P + + + + Sbjct: 279 PVVQTVLDLAAEVL 292 >UniRef50_A0AZD8 Transcriptional regulator, LysR family n=17 Tax=Proteobacteria RepID=A0AZD8_BURCH Length = 394 Score = 191 bits (486), Expect = 3e-47, Method: Composition-based stats. Identities = 72/319 (22%), Positives = 127/319 (39%), Gaps = 24/319 (7%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 + LD L+ L +L+ ER+V++AA R+N++ A S +L +LR DPL V S G+ P Sbjct: 21 LDVLDARLMRILLVLLTERTVSRAAVRLNMSQPATSAALKRLRTLLGDPLLVRSRYGMVP 80 Query: 65 TPLMVSMEQNLAEWMQMSN--LLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQR 122 T + + L +++ + + + + L ++ + L +R Sbjct: 81 TEFGARLIEPLRNALRVIDFIRIQQPTFDARTSVRTYRIGCPDYLNVLFVPKLVALFRER 140 Query: 123 YPQATIKLRNWDY--DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 P A + D A+ GE+D+ R + LF D Sbjct: 141 APHAQLVFHPLGDGFDDERALADGELDVVIDNRPVRRS----------RFRQDDLFDDRV 190 Query: 181 CVWLRKDHPALHQ-TWNLDTFLRYPHISICWEQ-SDTWALDNVLQELGRERTIAMSLPEF 238 +R HP + F P + + A+D L+ +G +R I ++LP F Sbjct: 191 VCLMRATHPLARRDAMTAARFAAAPQLCPTPSWLEASGAIDRQLERVGLQRRIVVTLPHF 250 Query: 239 EQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRN 298 E + + D +L T R ++Y +L L VALP+ ++ + + W++ Sbjct: 251 ELAAHALVRTDLILTTT-YRLARHYAKLLPLAAVALPVEPP-------DIAYRITWNESG 302 Query: 299 SHNPKIVWLRETIKNLYAS 317 S WLR I + Sbjct: 303 SCAEGGRWLRGLIAEATRA 321 >UniRef50_A8II36 Putative transcriptional regulator n=1 Tax=Azorhizobium caulinodans ORS 571 RepID=A8II36_AZOC5 Length = 305 Score = 191 bits (486), Expect = 3e-47, Method: Composition-based stats. Identities = 38/314 (12%), Positives = 99/314 (31%), Gaps = 22/314 (7%) Query: 7 TLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTP 66 +D L + + S +AA +N++ +A+S + KL L + S ++ TP Sbjct: 2 RIDFLGLQAFIAIAERGSFLRAAAHLNLSQTALSHRMKKLEDDLGVRLLIRSTRVVTLTP 61 Query: 67 LMVSMEQNLAEWMQMSNLLLDKPHHQT-PRGLKFELAAESPLMMIMLNALSKQIYQRYPQ 125 ++ + + ++ + + + L + L + +P Sbjct: 62 DGEALLPKAKQALAGLAAEVEALREKALGQETRVALGCLPTIATSHLPHVLLDFEAAHPG 121 Query: 126 ATIKLRNWDYDSLDAI-TRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 +K+ + + + G G ++++ ++ L + + Sbjct: 122 VAVKIYDNSASEIAGLVRSGAAAFGIG----------IVTAAMWDLEMTPLRKEPFLLLC 171 Query: 185 RKDHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 + H + + P I I + + +D+ L + + ++ Sbjct: 172 PQSHAFADKRAVSWGELEGVPLIRISPQAGNRALIDDALGSRREALNWRYEVQHVQTAVS 231 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 M + L P++ + + L LV L + + + + +P Sbjct: 232 MVQA--GIGLTIVPKFAMERSAIPGLRLVTL-------RNPSITRTLVVFTKRGVPLSPV 282 Query: 304 IVWLRETIKNLYAS 317 L E ++ A Sbjct: 283 ARDLLELVRARIAG 296 >UniRef50_Q5W9E2 Putative LysR-type transcriptional regulator n=2 Tax=Sphingobium RepID=Q5W9E2_9SPHN Length = 329 Score = 191 bits (486), Expect = 3e-47, Method: Composition-based stats. Identities = 54/312 (17%), Positives = 115/312 (36%), Gaps = 25/312 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 + L Q LM+ +SV AA+ +++ +S+ L +LR F + LFV + GL PT L Sbjct: 2 ISFMHLTVFQALMRAKSVGVAAEMLDMPQPTLSRHLKQLREHFGNQLFVRTSRGLEPTSL 61 Query: 68 MVSMEQNLAEWMQMSNLLL--DKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQ 125 ++ +++ +++ + L + F +AA +++L + + + P Sbjct: 62 AITAAPAVSQTLELYHSRLSGEPTFDPATSNRDFHIAASDVGHLLVLPRVLQWVRDLAPG 121 Query: 126 ATIKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 K + + + GEVDI +L + + LF + + Sbjct: 122 VRFKAIPLGGEKLIARLETGEVDIAIGS----------FPALYAGVVEQTLFPEEYVCVV 171 Query: 185 RKDHPALHQTWNLDTFLRYPHISICWE--QSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 + + ++ F H+ + ++ +L+++ I + F S Sbjct: 172 PRSY-LPAGRLTMNRFKAARHVLVDGRHLGHIHEDVEKLLRKIVGPSNITVMAESFLLSA 230 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 +A Q + +L P + ++ P+ WH+R +P Sbjct: 231 HIAEQSELILTT--PSRLTGLLNTKSVRILKPPVALP-------GFTVKQYWHERFHDDP 281 Query: 303 KIVWLRETIKNL 314 WLR + + Sbjct: 282 GNRWLRGILSRM 293 >UniRef50_Q9ZHH8 LysR-type transcriptional regulator PhnS n=1 Tax=Burkholderia sp. RP007 RepID=Q9ZHH8_9BURK Length = 380 Score = 191 bits (486), Expect = 3e-47, Method: Composition-based stats. Identities = 57/317 (17%), Positives = 118/317 (37%), Gaps = 9/317 (2%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 +++ ++++NLL L L++ +V+ AA R+++T S VS SL +LR F+D L V + Sbjct: 7 RNLRSVNMNLLPVLGELLRCPNVSHAANRLHLTQSTVSGSLKQLRLLFEDDLLVQRGREM 66 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLL-DKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQ 121 T + + ++ ++ L + F +A + ++ + L + Sbjct: 67 VLTEKAKELRPAVERLLEQASRLFCAETFDPATAANCFRIATADYVSALVTSRLGPVLQA 126 Query: 122 RYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPC 181 P +I L + + G VD+ +++ +EV D Sbjct: 127 NAPGVSITLTPTPGTTAKDLRLGVVDLIICPNRRENWEACGIAAHDPEFCHEVFIRDRLV 186 Query: 182 VWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQS 241 + + L +L PH C L ++G + I +P F Sbjct: 187 AIQSANRSLAERPLALADYLARPHAMYCRTDGQPTIEQETLAQMGLVQRIQFLVPYFTLL 246 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 + + L +Y +L L + P+PF + H+ + + Sbjct: 247 PQLVVDSHLVAL-IPLSLANHYARLFPLDVFEPPVPFPSLDLVMIG-----ACHRADRAD 300 Query: 302 PKIVWLRETIKNLYASM 318 + WLR+ +++ +S Sbjct: 301 --LYWLRKIVRDSASSF 315 >UniRef50_C5CPN7 Transcriptional regulator, LysR family n=1 Tax=Variovorax paradoxus S110 RepID=C5CPN7_VARPS Length = 299 Score = 191 bits (486), Expect = 3e-47, Method: Composition-based stats. Identities = 46/306 (15%), Positives = 97/306 (31%), Gaps = 20/306 (6%) Query: 11 NLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVS 70 LL L L R + +AA+ +N++ A +K L +L + LF G+ PTP Sbjct: 7 RQLLLLARLDTHRHLGRAAEAMNISQPAATKLLQQLEDSLGERLFERLARGMEPTPYGEI 66 Query: 71 MEQNLAEWMQMSNLLLDKPHHQT-PRGLKFELAAESPLMMIMLNALSKQIYQRYPQATIK 129 + + + ++ + + + +L + ++R+PQ + Sbjct: 67 LIRYARRVLSDFGSAREEMLALRSGLSGSLRVGSVPGAVPELLAPALVEYHRRHPQVAVS 126 Query: 130 LRNWDYDSLD-AITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDH 188 + D + + +G+VD+ + L + V +R H Sbjct: 127 VVVETSDVMQAQLEQGDVDLVLGRLTDSHDEAK--------YASVPLLGESQVVVVRAAH 178 Query: 189 P-ALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTI-AMSLPEFEQSLFMAA 246 P T L + + + ++E G + + + + Sbjct: 179 PVFERATVTLAEMANWSWVLQPPGSPQRGRFEAAMREAGIQARLDIIETASPIAITALLE 238 Query: 247 QPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVW 306 D + +Y +L L V + LP P L+ + + +P Sbjct: 239 NSDMAAV-MPASQASHYARLGVLRTVPVELPVRVP-------PICLVTRQDRALSPAAAQ 290 Query: 307 LRETIK 312 R + Sbjct: 291 FRRQLL 296 >UniRef50_C0D3N8 Putative uncharacterized protein n=2 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D3N8_9CLOT Length = 297 Score = 191 bits (486), Expect = 3e-47, Method: Composition-based stats. Identities = 41/312 (13%), Positives = 94/312 (30%), Gaps = 24/312 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +D + + + + +++T+AA++++V+ A+S ++K +F L+ T Sbjct: 1 MDSKQIQYILKVAECQNITRAAEQLHVSQPALSHFISKAEEELGAKIFNRGTTPLTLTQA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + M + L + + L +L + + YP Sbjct: 61 GEHYVKTARMMMALEENLKQEIDDLNNSRDGEIRLGLSDMRATSLLPFALPEFRRLYPNV 120 Query: 127 TIKLRNWDYDSLDA-ITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 TIK +++ + G VD+G L + VL+ + + Sbjct: 121 TIKTVESGSRTVEDNVRNGVVDLGIIP----------LYDYGEDLCARVLYDEELLLVSS 170 Query: 186 KDHPALHQT----WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQS 241 +D P +++ + + A+D V E G + M Sbjct: 171 EDLPCERGNVRPWVDIEEVTGRDFALLTGDNRLRRAVDAVFLEHGVKPRTVMESRNNMTV 230 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 + + LA P ++P + + + + Sbjct: 231 YML--ATSGMALAIVPETVVRMMNPVRIP------RIYSIGKSGFHWNIGAIRREDAVLS 282 Query: 302 PKIVWLRETIKN 313 L ++N Sbjct: 283 GAQEQLIRLLRN 294 >UniRef50_Q0RY04 Transcriptional regulator, LysR family protein n=5 Tax=Rhodococcus RepID=Q0RY04_RHOSR Length = 305 Score = 191 bits (486), Expect = 3e-47, Method: Composition-based stats. Identities = 60/310 (19%), Positives = 107/310 (34%), Gaps = 20/310 (6%) Query: 13 LLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSME 72 + L + ++ SV AA+ + VTPS VS+ LAKL L V G+ T + Sbjct: 7 IRALCAVAEQGSVAAAARSLYVTPSGVSQQLAKLEKEVGVALLVQVGRGVQLTQAGRLLA 66 Query: 73 QNLAEWMQMSNLLLDKPHHQTP-RGLKFELAAESPLMMIMLNALSKQIYQRYPQATIKLR 131 Q + + + + + + + S +++ ++ Q +P + Sbjct: 67 QRGQDIISLLAQAESEVASLDSDVAGELRIGSFSSASRVVVPRAIARMRQLHPGLEVSFV 126 Query: 132 NW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPA 190 D L A+ E+D+ + LP + + DV V L DH Sbjct: 127 AGDTDDLLPAVVGRELDLAVV-----DSWVTMPLHLPEDVICTPIHQDVADVALPADHRL 181 Query: 191 -LHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQPD 249 + LD P + +S L L+ G E I +PEF L A Sbjct: 182 AAAEQIELDEVADMPWTTWRKGESFHTWLVQTLRMRGVEPEIRYEVPEFAAQLEFVAH-- 239 Query: 250 NLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWLRE 309 L A PR + + + P+ L + K N P + + Sbjct: 240 GLAAALIPRLARIWVPDDVAIVAVHPV---------LRREIFAVRRKDNDR-PTVRAGID 289 Query: 310 TIKNLYASMA 319 + ++A+++ Sbjct: 290 ALSEVFAAIS 299 >UniRef50_C7QGK1 Transcriptional regulator, LysR family n=1 Tax=Catenulispora acidiphila DSM 44928 RepID=C7QGK1_CATAD Length = 298 Score = 191 bits (486), Expect = 3e-47, Method: Composition-based stats. Identities = 41/284 (14%), Positives = 88/284 (30%), Gaps = 9/284 (3%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +D+ L L+ L +V+ AA+ + +TPSAVS+ LA L L + T Sbjct: 2 IDVRQLRTLRALADHGTVSAAAEALYLTPSAVSQQLAVLSKSTGCELLERRGRNVVLTEA 61 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQAT 127 + + + +P + +A +M ++ K + + + + Sbjct: 62 ARVLVGHADAVFAQLERAQSELRAISPAPMTVRIAGFPTAVMAVIAPAMKALREAHEEWR 121 Query: 128 IKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRK 186 ++ + +S+ + G VD+ + I L +V + Sbjct: 122 FEIADTESEESVAHLIDGTVDVAVVMAAPNRPLLG-----DPRIRILPLLEEVYVAAVPA 176 Query: 187 DHPA-LHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMA 245 H + L + P + S + + + G + +F +L + Sbjct: 177 GHRLAAAERIGLADLVEEPFVLAAEGLSCHDQVTAICADAGFQPRGRYRATDFSAALALI 236 Query: 246 AQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVP 289 A + + P + LV L + Sbjct: 237 A--NGFGVTLLPTLGVPPLMPEGVVLVPLKEDWPRRVSLIAVRT 278 >UniRef50_D1PWM9 HTH_1 family transcriptional regulator n=4 Tax=Prevotella RepID=D1PWM9_9BACT Length = 306 Score = 191 bits (486), Expect = 3e-47, Method: Composition-based stats. Identities = 43/295 (14%), Positives = 102/295 (34%), Gaps = 20/295 (6%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 ++ T++L + L + + ++A+K + +T S +S+ + +L FD LF + G+ Sbjct: 1 MTVVTMELRQIRYFLKLAELLNFSEASKALFITQSTLSQQIRQLEQEFDTVLFDRNSHGV 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTP-RGLKFELAAESPLMMIMLNALSKQIYQ 121 S T + + + + ++ + K + + +L + + Sbjct: 61 SLTEAGMQLRRYARCVVNEADACVQKMEDLKNMLAGELNIGVTFSFSP-LLTETVLEFMK 119 Query: 122 RYPQATIKLRNWD-YDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 RYP + + + +D + + EVD + + + + I+ VLF + Sbjct: 120 RYPNVRLNVYYKTMGELMDMLQQREVDFVLAFKP---------TVMNDKIESHVLFGNRL 170 Query: 181 CVWLRKDHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFE 239 V + HP ++ D + Y D + G + + L + Sbjct: 171 SVVVSDTHPLAKRKSITTDDLMMYDLALPARGLQARNTFDETIGMAG-HPKVRIELNDVS 229 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLW 294 L + Q + + + + LVA+P+ + + Sbjct: 230 ILLKLVRQSKLITV------LAEASIHDEDGLVAIPIQIANDGMEGCIHQLRQAY 278 >UniRef50_A1K5Q5 Transcriptional regulator, LysR family n=4 Tax=Betaproteobacteria RepID=A1K5Q5_AZOSB Length = 295 Score = 191 bits (486), Expect = 3e-47, Method: Composition-based stats. Identities = 41/283 (14%), Positives = 88/283 (31%), Gaps = 14/283 (4%) Query: 13 LLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSME 72 + + + + T+AA+R+++ +S + L LF S + T Sbjct: 1 MRYFVAVAETLNFTRAAERLHIGQPPLSMQIRDLETEVGARLFERSRRKVELTDAGERFL 60 Query: 73 QNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMI-MLNALSKQIYQRYPQATIKL 130 + + + ++ + + S L +L QR+P +++ Sbjct: 61 AHARAILARTEEAAEEARRAAAGEIGELRVGITSSLPYTAILPDALAAFRQRHPALRLQI 120 Query: 131 RNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHP 189 + DA+ + +D+G ++ P I + D V + +HP Sbjct: 121 HEMFTAEQFDALAQDRLDVGLVRFDATLA--------PPHIRVREIGRDALRVVVHAEHP 172 Query: 190 ALHQ-TWNLDTFLRYPHISIC--WEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAA 246 + + + IS LD + + G E + E + + A Sbjct: 173 LAAKASVSFAELRDADFISFPADAGTELPAILDRLCRGAGFEPRVVQLAREATTQIGLVA 232 Query: 247 QPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVP 289 + L AP C ++ LP+ F + Sbjct: 233 AGLGIALLPAPLECVRMPRVRYLPVKDAGADFPLAVACHAHRT 275 >UniRef50_C0ZAD7 Transcriptional regulator n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZAD7_BREBN Length = 289 Score = 191 bits (486), Expect = 3e-47, Method: Composition-based stats. Identities = 45/314 (14%), Positives = 93/314 (29%), Gaps = 28/314 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 + L + L + + T+A ++I ++ S VS ++ L LF + G+ T Sbjct: 1 MTLFQMEVLVAVTNAGNFTRAGEQIGLSQSGVSHTIGALEKELGISLFTRNRSGVKLTAA 60 Query: 68 MVSMEQNLAEWMQMSNLLLD-KPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + ++ +L+ +A+ + +L L K I YP Sbjct: 61 GEKIVTSARIILENVSLIKQVAAESGEHLEATLRIASFPSVTAQLLPKLLKSIESHYPHM 120 Query: 127 TIKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 KL Y + + I G VD+GF ++ +L +D + Sbjct: 121 QTKLYEGSYQEIKEWIRSGVVDVGFHVWPDD------------ELEGILLTTDALHAVVP 168 Query: 186 KDHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 HP + L+ R + + + G T++ + + L M Sbjct: 169 AQHPLAKEPSLTLEQLARESFLMPMAGC--HLLIGAEFAKAGLTPTVSYEIADNTTILAM 226 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 + + P LP + L L + Sbjct: 227 VES--GVGVTIVPSLTLP---------TQLPDVAVKEITPPLSRQIGLAVRSLREAPSAV 275 Query: 305 VWLRETIKNLYASM 318 + + ++ Sbjct: 276 QAFLREAERIAPTL 289 >UniRef50_Q1YKY0 Possible transcriptional regulator n=1 Tax=Aurantimonas manganoxydans SI85-9A1 RepID=Q1YKY0_MOBAS Length = 316 Score = 191 bits (486), Expect = 3e-47, Method: Composition-based stats. Identities = 40/314 (12%), Positives = 90/314 (28%), Gaps = 21/314 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 + + L + + S+T+AA R+NV A+ L L L + G PT Sbjct: 1 MRIRQLEFFVAVCETGSITQAAARLNVAQPALGLQLKSLEDQLGVVLLERTRRGAVPTEA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNALSKQIYQRYPQA 126 V + ++ + + + R L L ++ L + + +R Sbjct: 61 GVIFLEEARHIIRRLSEVRRRLREFAGRQPRTITLGLTPSLTTVLTGRLLEIVPERLSNV 120 Query: 127 TIKL-RNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 +++ + + LD + RG +D+ + + + L +V Sbjct: 121 RLQIFEEFSHTLLDRLGRGHLDLALAYSVPDGLK----------LRRKPLLQEVLFFVCA 170 Query: 186 KDHPA-LHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 P Q + ++ + + + + + Sbjct: 171 PGSPFDHPQPLPFADLTEPNFVMPSERDFVRQLVEETMAANRMTLKVPYQVESMQAMKEL 230 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 A+ + + L + +++W K + P+ Sbjct: 231 IARGMACGILPFGTIARELEAGI--------LTVRPIVSPAITRTLSMVWSKDVAPAPQE 282 Query: 305 VWLRETIKNLYASM 318 L I+ L A M Sbjct: 283 RQLATIIEELLAVM 296 >UniRef50_Q2KBI7 Probable transcriptional regulator protein, LysR family n=3 Tax=Rhizobium etli RepID=Q2KBI7_RHIEC Length = 298 Score = 191 bits (486), Expect = 3e-47, Method: Composition-based stats. Identities = 57/297 (19%), Positives = 110/297 (37%), Gaps = 22/297 (7%) Query: 22 ERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSMEQNLAEWMQM 81 E+SV+ AA+R+ ++ SA+S++L++LR DP+ V + G+ TP +++ +++ Sbjct: 18 EQSVSAAARRLGLSTSAMSRTLSRLRTALGDPILVPAGRGMVATPHALAIAEDVHLLKDA 77 Query: 82 SNLLLDKPH--HQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQATIKLRNWDYDSLD 139 +L P F + A +++ LS + P ++ + Sbjct: 78 VKAVLSPPSTVDIREVRRHFTIRANEAFVLLYAADLSAAVTNAAPGIRLRFAPRSDKDVQ 137 Query: 140 AITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPAL-HQTWNLD 198 A+ +D+ +L + + LF D R HP + Sbjct: 138 ALREAAIDLDIG----------VLPRDSGELRCQSLFEDRFVGVARVGHPIFEADRITAE 187 Query: 199 TFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQPDNLLLATAPR 258 + H+ + +D L ELG R + +P F + +AA D + + P+ Sbjct: 188 RYAACGHVLFSTQADYAGPVDRALGELGLHRDARLIVPSFPAVIAVAAASDLIG--SVPK 245 Query: 259 YCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWLRETIKNLY 315 + ++ LP+ WH R +P WLR I + Sbjct: 246 SYCKSGAMREIRTFDLPVAVP-------GFNIVQAWHPRMDADPAHRWLRALIFETF 295 >UniRef50_C3K6Q2 Nodulation protein D n=1 Tax=Pseudomonas fluorescens SBW25 RepID=C3K6Q2_PSEFS Length = 304 Score = 191 bits (486), Expect = 4e-47, Method: Composition-based stats. Identities = 55/300 (18%), Positives = 118/300 (39%), Gaps = 21/300 (7%) Query: 22 ERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSMEQNLAEWMQM 81 E+++T+A +R+ ++ A S +LA+LR +F D L V + + TP ++ Q + + + Sbjct: 20 EQNITRAGERLFLSQPATSAALARLREYFQDQLLVPNGRKMVRTPKGEALIQPVRDLLIQ 79 Query: 82 SNLLLDKPHHQTPR--GLKFELAAESPLMMIMLNALSKQIYQRYPQATIKLRNWDYDSLD 139 L+ P KF L A + ++L +S+++ + P A++++ + + Sbjct: 80 MRSTLENRAEFEPAQSQRKFVLMASDYVCTVLLPQVSRRLNELAPMASLEMIPPNDTPRE 139 Query: 140 AITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPALHQTWNLDT 199 + RG VD+ + L +F D +D+P + + + + Sbjct: 140 TLERGNVDLLVLP----------ATHLGDDHPSLTIFEDRFVCMTCQDNPLVGDSLSFEQ 189 Query: 200 FLRYPHISICWEQSDTWALDNVL-QELGRERTIAMSLPEFEQSLFMAAQPDNLLLATAPR 258 + + H+ + W ++D ER + + F + R Sbjct: 190 YKQMGHVLVRWGMQRVPSMDEWFLNRYNFERRVEVITNAFSNVPTFLPGTLRIA-TMHLR 248 Query: 259 YCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWLRETIKNLYASM 318 Q + L ++ +P + + W++ H+P + WLR I A+M Sbjct: 249 LAQQCARELPLKILPVP-------WDAPTLVMAIQWNRHQQHDPGLSWLRSLIVESAAAM 301 >UniRef50_C6HUD2 Transcriptional regulator, LysR family n=1 Tax=Leptospirillum ferrodiazotrophum RepID=C6HUD2_9BACT Length = 295 Score = 190 bits (485), Expect = 4e-47, Method: Composition-based stats. Identities = 43/314 (13%), Positives = 91/314 (28%), Gaps = 29/314 (9%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 + + L L L + + T+ +++ +T SAVS +LA LF G+ T Sbjct: 1 MTIIQLRVLLALKELGNFTEVGEKLGITQSAVSHALASFEKEIGITLFNRDRKGVVLTEG 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + ++ E + + ++ + K + + ++ L + Q+YP Sbjct: 61 GQRIIDHVREIVGRVERIKEEASSLSGLKIGKISVGTLQSAAIRIIPGLMGVMRQKYPGI 120 Query: 127 TIKLRNWDYDSLD-AITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 I + + I VD+G ++ L +D + Sbjct: 121 EISVFEGTDQEVQDWIHSETVDLGILTAPC------------QNLETIPLLTDRMFGIVP 168 Query: 186 KDHPALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTI-AMSLPEFEQSLF 243 +DHP +T +LD P I + + + + G + Sbjct: 169 EDHPLAGCKTLSLDQLSSEPII--RALGNCGMIVASRFSQAGLSPGFKTIEARNISTISA 226 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 M + + +P+ L K + +P Sbjct: 227 MVRSGAGSAI-----LAGLAVPRDTTGIRVIPIEPPLF------RQIVLAAPKLQALSPA 275 Query: 304 IVWLRETIKNLYAS 317 + + A Sbjct: 276 ARVFVDLTREWMAG 289 >UniRef50_Q6FDZ3 Putative transcriptional regulator n=1 Tax=Acinetobacter sp. ADP1 RepID=Q6FDZ3_ACIAD Length = 307 Score = 190 bits (485), Expect = 4e-47, Method: Composition-based stats. Identities = 47/314 (14%), Positives = 112/314 (35%), Gaps = 28/314 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +D++ L +++E ++++AA R+++ +++ + L + L P G+ T Sbjct: 2 IDIHKLNAFVAVVEESNISRAANRLHMQQPPLTRLIQSLEQDLNTTLLKRLPRGVEVTEA 61 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMI-MLNALSKQIYQRYPQ 125 + Q + ++ + + + + + + + L L + +++P Sbjct: 62 GKVLYQEAVTILAHASSIPQRVQNIAQGKEGQINIGFTHSIGLHPFLPTLLRHFREKFPA 121 Query: 126 ATIKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 +I L +L DA+ ++DI F + + A+ + ++ V L Sbjct: 122 VSIHLEEDSSSALTDAVINEKLDIVFLRKPAPK---------HTAVQTMHVLNETLIVAL 172 Query: 185 RKDHPAL--HQTWNLDTFLRYPHISICWEQSDTWALDNVLQ---ELGRERTIAMSLPEFE 239 +HP +L Y + + DN+L + G I P Sbjct: 173 PSNHPLAMQQGAIHLPDLEPYEFVLY-RRLAGQDLFDNILANCYQAGFSPNIVQEAPRLT 231 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 SL + A + L+ P Q + ++ PL + P ++ + Sbjct: 232 SSLNLIAA--GIGLSIVPASIQDFWNK---QIIYRPLEAKKPCIA----PIYAIYSAK-D 281 Query: 300 HNPKIVWLRETIKN 313 +N ++ +K Sbjct: 282 NNIRVAHFLNLLKA 295 >UniRef50_C3K9K8 Cyn operon positive regulator n=1 Tax=Pseudomonas fluorescens SBW25 RepID=C3K9K8_PSEFS Length = 299 Score = 190 bits (485), Expect = 4e-47, Method: Composition-based stats. Identities = 42/312 (13%), Positives = 87/312 (27%), Gaps = 25/312 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L + ++ S TKAA+ ++V A+S ++++L LF + +S T Sbjct: 1 MNLKALEYCVEIARQGSFTKAAQALHVAQPALSMAVSRLEEELGVALFNRATRQISVTAE 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 ++ + T + + + + L Q RYP Sbjct: 61 GQLFLARAEACLEGLAGARRELQDLTQLHSGEIRVGVPPMYGIRHIPELLMQFRARYPGI 120 Query: 127 TIKLRNWDYDSLD-AITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + + D + + ++D+ + + +L SD + + Sbjct: 121 AMHVVEGSADDISNRLATRDIDVALLES----------RRVDPDWESVLLGSDEMVLCMH 170 Query: 186 KDHPALHQ-TWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 HP + P + LD +IA+ + Sbjct: 171 AQHPLAAASSIPASRLQDEPMLVFDNTFLQRHLLDAFCSAARVRFSIALESNFVPLVITA 230 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 + ++T R Q + F L W + Sbjct: 231 TRS--GMGISTLLRSVQEQEPGLAGVSFEP----------AQFMHFNLCWRANEYLSQAN 278 Query: 305 VWLRETIKNLYA 316 ET K + Sbjct: 279 QRFIETAKAYFQ 290 >UniRef50_A1BA87 Transcriptional regulator, LysR family n=1 Tax=Paracoccus denitrificans PD1222 RepID=A1BA87_PARDP Length = 300 Score = 190 bits (485), Expect = 4e-47, Method: Composition-based stats. Identities = 41/312 (13%), Positives = 98/312 (31%), Gaps = 25/312 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 + + L C +L +E + T+AA+R+N++ +S + L L + ++ T Sbjct: 1 MRMRQLRCFVVLAEELNFTRAARRLNMSQPPLSTQIQTLEREVGAELISRTSRKVALTRA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + L + E+ A ++ L+ L + +P+ Sbjct: 61 GELFLPRARNMLDQYERSLQEIREIQQGQDGLLEIGATGSILRGGLSELLAHFARLHPRI 120 Query: 127 TIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 T+++ + + D+ F+ + +E + + +R Sbjct: 121 TLRVHEQTPAAQITEVLSRRTDVSFNRSVPRDE----------ELAHEYGWREEMVALVR 170 Query: 186 KDHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQ-ELGRERTIAMSLPEFEQSLF 243 DH +T ++D H+ + + SD A G ++ + + + Sbjct: 171 SDHRLAGRTCVSIDDLREDQHVVLRPDSSDFAAYVMACIVAAGYRPRVSQQVVDAQSIPS 230 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 + ++ P PL F + +++H R+ P Sbjct: 231 LIVA--GFGVSIVPAGIARLTAG--------PLTFLPIRPNPPVSEVFIVYHHRDPA-PA 279 Query: 304 IVWLRETIKNLY 315 + I+ Sbjct: 280 LQLFLAEIRRSL 291 >UniRef50_P55359 Nodulation protein D 1 n=250 Tax=Proteobacteria RepID=NODD1_RHISN Length = 322 Score = 190 bits (485), Expect = 4e-47, Method: Composition-based stats. Identities = 62/318 (19%), Positives = 126/318 (39%), Gaps = 19/318 (5%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 LDLNLL+ L LM ER +T AA+ IN++ A+S ++ +LR +F D LF + L Sbjct: 1 MRFKGLDLNLLVALDALMTERKLTAAARSINLSQPAMSAAITRLRTYFRDELFTMNGREL 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLD--KPHHQTPRGLKFELAAESPLMMIMLNALSKQIY 120 PTP ++ + E + +L + P + F + + ++ L + ++ Sbjct: 61 VPTPRAEALAPAVREALLHIHLSIISWDPFNPAQSDRSFRIILSDFMTLMFLERVVVRVA 120 Query: 121 QRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 + P + +L + + + + RG+VD + LF + Sbjct: 121 REAPAVSFELLPFSDEPDELLRRGDVDFLILPE----------MFMSHTHPRAKLFDERF 170 Query: 181 CVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQ 240 + L ++D ++ H++ + + + +L+E G R + +++P F Sbjct: 171 VCVSCPTNQKLPPQLSIDNYVSMGHVAAQFGKQRPSVEEWLLREHGLRRRVEVAVPGFTM 230 Query: 241 SLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 + D + R ++ + L + LP P + W +S Sbjct: 231 IPSFLSGTDRIA-TLPLRLAMHFAKAIPLRITELPQPI------FPAFTEAVQWPAPHSS 283 Query: 301 NPKIVWLRETIKNLYASM 318 +P +W+RE + + Sbjct: 284 DPASLWMREIFLQEASRV 301 >UniRef50_Q72A86 Transcriptional regulator, LysR family n=3 Tax=Desulfovibrio vulgaris RepID=Q72A86_DESVH Length = 300 Score = 190 bits (485), Expect = 4e-47, Method: Composition-based stats. Identities = 46/310 (14%), Positives = 95/310 (30%), Gaps = 24/310 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L +L C +++ + AA+ + T S VSK++ L + PL S G++ T Sbjct: 1 MNLRVLRCFVEVVRNGGFSAAARVVCATQSTVSKAVRSLEDEYGTPLLDRS-NGVALTAA 59 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNALSKQIYQRYPQA 126 ++ + + L + Q + + RYP Sbjct: 60 GETVYRRALAILAEKEALDAELGAQQSLQHGTLRFGVPPVACDRLFARPLSAFHARYPGI 119 Query: 127 TIKLRNWD-YDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 ++L Y + + RGE+++ + R + L + L Sbjct: 120 RMELHEAGCYALEEMVLRGELEMVLALLPVSER-----------FETAPLCDEPLIAVLP 168 Query: 186 KDHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 + HP + L+ P I + + + G + + + + Sbjct: 169 EGHPLSGRPCIRLEDLDGSPFIQFEQGFALNPRIRDACLRRGVSLRETLCSSQMAFIISL 228 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 A L +A PR + L L L W K ++ +P Sbjct: 229 VAA--GLGVALIPRLMLAEGTPAGVVTAHLD-------ADDLRWQGALAWRKGHALSPPA 279 Query: 305 VWLRETIKNL 314 + + + Sbjct: 280 RAWLDIMAEM 289 >UniRef50_Q47V10 Hydrogen peroxide-inducible genes activator n=1 Tax=Colwellia psychrerythraea 34H RepID=Q47V10_COLP3 Length = 299 Score = 190 bits (485), Expect = 4e-47, Method: Composition-based stats. Identities = 40/314 (12%), Positives = 86/314 (27%), Gaps = 28/314 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 + L L L + + + KAA+ V+ +S L KL L + TP Sbjct: 2 IKLRDLEYLTAIDKHKHFGKAAQSCFVSQPTLSGQLMKLEEQLGLQLVERHRRNVMLTPA 61 Query: 68 MVSMEQNLAEWMQMSNLLLD-KPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + + +Q + P L L +L + + + P Sbjct: 62 GEQLVKEARKVLQAAGQFESCAKALLDPFAGDLHLGLIPTLAPYLLPHIMADLNKALPNI 121 Query: 127 TIKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 L L + G++D+ + LF + + Sbjct: 122 NFFLHENQTKVLLQELDEGKLDVLILPYLDEMDK----------FESYQLFDEPLMLATP 171 Query: 186 KDHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 K+H + +L +++ G + + E M Sbjct: 172 KNHRLANKKDLSLSDLHDEKILTLADGHCLKDQAMGYCFSAGAKEDNSFQATSLETLRHM 231 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 A + + P L + + + + Q +L+ S Sbjct: 232 VAS--GMGITLLPALAAQ------GNLASDTIHYGQFQAPVPVRGISLVIRPNYSR---- 279 Query: 305 VWLRETIKNLYASM 318 + ++++ AS+ Sbjct: 280 ---MQCVRSIVASV 290 >UniRef50_UPI0001693B14 transcriptional regulator, LysR family protein n=1 Tax=Xanthomonas oryzae pv. oryzicola BLS256 RepID=UPI0001693B14 Length = 299 Score = 190 bits (485), Expect = 4e-47, Method: Composition-based stats. Identities = 50/317 (15%), Positives = 102/317 (32%), Gaps = 21/317 (6%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 L L L S T+AA+++ V+ ++S+ + L A PLF + Sbjct: 1 MPRPKTTLRQLSYFVALADTGSFTRAAEQMGVSQPSLSQQIRALEAIIGAPLFERGAQAI 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLD-KPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQ 121 TPL + + L + + L L ++ +L ++++ Sbjct: 61 -LTPLGRDLLDRARSILLDVTDLEEVRATAADTLVGTIRLGVSPTLGAYLMPSLVARLHR 119 Query: 122 RYPQATIKLRNWDYDSLDA-ITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 +P + +R +L A ++ G D+ + R + E LF ++ Sbjct: 120 AHPALRVHVREGLPTALAAGLSSGLHDLVLAQLPVPGR----------GLHSERLFRELL 169 Query: 181 CVWLRKDHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFE 239 V + DHP + L +++ E + + E+G + Sbjct: 170 HVTMAADHPLRTKACITLADLRGANLLTLMPEYRLAEQVAAIALEVGANVLRDYEGTSLD 229 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 M + LA P + +V P+ + + LLW + Sbjct: 230 AIRQM--AGMGMGLALLPDLYVHQEIREGDDVVVRPV-----KGGRYYREIGLLWREGAG 282 Query: 300 HNPKIVWLRETIKNLYA 316 P + ++ + A Sbjct: 283 RAPAFGLIANLLRAVAA 299 >UniRef50_Q7WNN7 Probable LysR-family transcriptional regulator n=2 Tax=Bordetella RepID=Q7WNN7_BORBR Length = 306 Score = 190 bits (485), Expect = 4e-47, Method: Composition-based stats. Identities = 48/313 (15%), Positives = 107/313 (34%), Gaps = 21/313 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +++ L + +M+ S+T AA+ I+ T +S+ ++ L A D LF+ L T Sbjct: 1 MNVRALEAFRAVMRTGSMTGAARIIHTTQPNISRLVSMLEAELDLKLFIREGNKLHVTDE 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + + + L D G + +A L L + QR+P+ Sbjct: 61 GAAFFKEVEQHYAGLRALKDAARTIKQLGGGRLHIAVAPALSHGFLASAVTAFTQRHPRV 120 Query: 127 TIKLRNWDYDSLDAITRGEV-DIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 T+ +R + ++ + ++ D+G + + ++ E + S L Sbjct: 121 TLSIRTCNSYMVEQLVNSQLCDLGLAAF--------IGHVTEPGLEAERIASIRGVCLLP 172 Query: 186 KDHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 + H + P +SI + +D++ ++ R I + + Sbjct: 173 QAHRLASRDVIHARDLEGEPFVSIARQNGSREHVDSLFEKAKVTRKIEVEAENASTICHL 232 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 AQ L ++ + H L + + + P TLL + + Sbjct: 233 VAQ--GLGVSVLNAVIAEDFRCHGLVVREF--------RPAIHFPITLLRSSHRPRSLLV 282 Query: 305 VWLRETIKNLYAS 317 + + + Sbjct: 283 AAFIDCLGAVLNE 295 >UniRef50_B5JHH8 LysR substrate binding domain protein n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JHH8_9BACT Length = 296 Score = 190 bits (485), Expect = 4e-47, Method: Composition-based stats. Identities = 43/313 (13%), Positives = 94/313 (30%), Gaps = 22/313 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L + + R+ T+AA+ NV+ A+S + KL A PLF ++ T Sbjct: 1 MELQQLRYFSSVAKLRNFTRAAEECNVSQPALSIQIKKLEAELGGPLFHRQGRTIALTQA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQR-YPQA 126 +E + M LD+ G + A + ++ + + P Sbjct: 61 GERLEGKAEALLLMHQSTLDELKDTVTEGGEAHFGATLTIAPYLIPYVVSHAGKEGMPAF 120 Query: 127 TIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRK 186 ++ N+ L I G +D + +V+ + + +R Sbjct: 121 RMQ-ENFTEGLLSGILDGSLDFAIMSTPVEVPK----------LLVKVIAREPFVLVMRS 169 Query: 187 DHPALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMA 245 DH + P + + + ++ + + L + Sbjct: 170 DHRLARKRRILAADVRAEPFLPLSHIHCAGRQISEFYKQGPGRSKPVFESAQIDTILKLV 229 Query: 246 AQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIV 305 AQ ++ P+ + L + + L +++ H + Sbjct: 230 AQ--GQGVSLLPKMAVMDSLESVLCYRVV-------EGNDLGRDISMVHHPDRYLSVAAR 280 Query: 306 WLRETIKNLYASM 318 L I+ Sbjct: 281 GLMALIERSLNDF 293 >UniRef50_D2MBA7 Transcriptional regulator, LysR family n=1 Tax=Rhodopseudomonas palustris DX-1 RepID=D2MBA7_RHOPA Length = 304 Score = 190 bits (485), Expect = 4e-47, Method: Composition-based stats. Identities = 52/310 (16%), Positives = 108/310 (34%), Gaps = 20/310 (6%) Query: 13 LLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSME 72 L + + S+ KAA R++V PSAVS+ +A+L D LF S +G+ TP + Sbjct: 6 LRYFNEVARLGSIRKAADRLHVAPSAVSRQIAQLEHELDAVLFERSKVGVQLTPAGEVLA 65 Query: 73 QNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQIYQRYPQATIKLR 131 + + + ++ + L L+ +L L + RYP T +++ Sbjct: 66 RQSNRIFRDLDRARNEIDDLRGLRRGEVSLFVIEGLVSGLLPDLLANFHHRYPAVTFRIQ 125 Query: 132 NWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPA 190 D ++A+ E DIG + + E+++ + + H Sbjct: 126 TGSTDRIIEALLEDEADIGITFNATPRPEIEVIAEHV----------EPIACLVAPTHEF 175 Query: 191 LHQ-TWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQPD 249 ++ + LD + + + R + ++ E + MAA Sbjct: 176 ANRVSLTLDDICTQTIALPEHSFGLRQVFERAIAKRQRTPQVLVTTNSLELTKRMAAT-- 233 Query: 250 NLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWLRE 309 ++A P +LH L A+P+ + + H+ + Sbjct: 234 GQVIAFMPAL-TVITELHSDALRAIPIADPAFAAARSSISI----HRDRPLPHAPQAFLK 288 Query: 310 TIKNLYASMA 319 + + ++ Sbjct: 289 ALADAIRGLS 298 >UniRef50_Q1LFI3 Transcriptional regulator, LysR family n=1 Tax=Cupriavidus metallidurans CH34 RepID=Q1LFI3_RALME Length = 311 Score = 190 bits (485), Expect = 4e-47, Method: Composition-based stats. Identities = 52/314 (16%), Positives = 114/314 (36%), Gaps = 22/314 (7%) Query: 7 TLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTP 66 L +++ + RS + A++ I++T SAVSK ++ A LF S ++PT Sbjct: 14 NFTLREFRVFRVVYELRSFSGASQTIHMTQSAVSKVCQEMEAKVGQRLFERSTRKVTPTQ 73 Query: 67 LMVSMEQNLAEWMQMSNLLLDKPHH-QTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQ 125 L + ++ E + + + +A+ + + +L ++ +P Sbjct: 74 LAHQLYGHVCEVLGTMDAAERSMQSLLNLEAGEVSVASSPMMCVGLLRGAVSAFHEAHPA 133 Query: 126 ATIKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 I + D +++ + G+ D G + + E L+++ V Sbjct: 134 IRIGMHELSTDETIEYVVNGKADFGLVS----------MEEAHPKLSIEHLYNESMFVIC 183 Query: 185 RKDHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 DH + + + YP IS+ S +D V + ++ + ++ Sbjct: 184 AGDHELARKRKVSWELLADYPQISLHSTFSTRRTIDRVFASRHLAYSTSVEVGTVLSAIS 243 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 A L + P Y + + L ALP + +E P +L+ + Sbjct: 244 FAKA--RLGVTVLPGYVREFVSELGLVARALP-------CEGVEHPISLITRWNARLSTP 294 Query: 304 IVWLRETIKNLYAS 317 L ++++ A+ Sbjct: 295 AECLLDSVRKRLAA 308 >UniRef50_A4AGD2 Putative LysR-family transcriptional regulator n=1 Tax=marine actinobacterium PHSC20C1 RepID=A4AGD2_9ACTN Length = 324 Score = 190 bits (485), Expect = 4e-47, Method: Composition-based stats. Identities = 45/282 (15%), Positives = 94/282 (33%), Gaps = 11/282 (3%) Query: 1 MKKSITTL-DLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSP 59 M S+ T DL L ++ + +++ AA+ + + A+S+ L + ++ L V S Sbjct: 1 MIMSMDTTPDLLTLRIVRAISDHGTISGAARALGYSQPALSQHLTRTQSRLGLALVVRSG 60 Query: 60 LGLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTP-RGLKFELAAESPLMMIMLNALSKQ 118 G+ T ++ + + + + +AA + ++ L +Q Sbjct: 61 RGVRLTEAGRALASHAVTVINAVDAASAELAELAGLSSGTVRIAAFPTVSSTVIPRLIRQ 120 Query: 119 IYQRYPQATIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFS 177 + Q++P T+K +L + G D+ + R+ L LF+ Sbjct: 121 LRQQHPNLTVKYVEAEPPQALQLLRDGTADVAITFSYPGDRADPHL-LRDGGHTTVPLFT 179 Query: 178 DVPCVWLRKDHPAL-HQTWNLDTFLRYPHISICWEQSD-TWALDNVLQELGRERTIAMSL 235 + + L HP + +L I + L + G I + Sbjct: 180 EPVVLALPDSHPLASADSVSLADLADDAWI---AGCALCRGHLLALCSVEGFAPAIGLET 236 Query: 236 PEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLP 277 L L +A P+ + + + P P Sbjct: 237 DNALAVLSFV--SRGLGVALLPQLALASLTVPEGVSIHSPQP 276 >UniRef50_Q13T34 Transcriptional regulator, LysR family n=60 Tax=Proteobacteria RepID=Q13T34_BURXL Length = 334 Score = 190 bits (485), Expect = 4e-47, Method: Composition-based stats. Identities = 40/316 (12%), Positives = 94/316 (29%), Gaps = 33/316 (10%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L +++++S T AA+++ VT +SK + L PL + + T Sbjct: 15 VELRALRYFVEVVRQQSFTVAAEQMFVTQPTISKMVKSLEDEIGSPLLLRDGRQMVLTDA 74 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + Q + + L + + + + + QRYP+ Sbjct: 75 GRIVYQRGQDVLAAHAQLQAELNDLDTLGRGQLTIGIPPMGGSLFTP-AIAAFRQRYPKI 133 Query: 127 TIKLRNWDYDSLD-AITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 +KL +++ A+ GE+++G L P I+ + + + R Sbjct: 134 ELKLFEQGSRAIEAALINGELELG----------GVLQPVDPENIEVLPVTRQLLWLVAR 183 Query: 186 KD------HPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFE 239 H L P + + + N + G TI ++ Sbjct: 184 TGSNWDDLH-----EVPLAQLANEPFVFYGESLALNDVVLNACRTAGFAPTIVGRSGHWD 238 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 + + +A P + + + ++ + W + Sbjct: 239 FMAALVLA--GVGIALLPAPYCRRLDPAKFTCRPV-------IEPEIPWEMAIGWRRNGY 289 Query: 300 HNPKIVWLRETIKNLY 315 + + + Sbjct: 290 LSHAARAWLDVAREAL 305 >UniRef50_C1B6M2 Putative LysR family transcriptional regulator n=1 Tax=Rhodococcus opacus B4 RepID=C1B6M2_RHOOB Length = 303 Score = 190 bits (485), Expect = 4e-47, Method: Composition-based stats. Identities = 44/314 (14%), Positives = 95/314 (30%), Gaps = 23/314 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +++ L L + SVT+AA+ +++ AV++ +A L LF S G+ T + Sbjct: 1 MEIRQLKALVAVADTGSVTRAAQVLHLVQPAVTRHIATLEDELGTQLFERSRAGMLLTEV 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + ++ + + + ++ LS I ++P Sbjct: 61 GEQVLERARRALREIERAKEVASTSDHSVSGHVSVGLLPSVARVIGPRLSDAIVSQHPGL 120 Query: 127 TIKL-RNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 ++L + + G VD + + A + + + Sbjct: 121 QLQLTVGYAGHLAKWLEGGAVDFAILFDQP----------MSSAFSMDPVAIEDLWAIAP 170 Query: 186 KDH-PALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 L+ L P I +D LG ++ + + + Sbjct: 171 PGSLEDTGAPIPLEHVLSQPMIIPNPPHGLRTLIDVAAARLGITPSVTLETNDATLQRAL 230 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 A D L + P H ++A+P L TL+ R + Sbjct: 231 VA--DKLGWSMLPASMAT-AGAHGDEVIAVP------TTPSLTRTLTLV-RPRGRMSAAE 280 Query: 305 VWLRETIKNLYASM 318 + + + +M Sbjct: 281 AVVHNALLDAVTAM 294 >UniRef50_Q46NS6 Transcriptional regulator, LysR family n=6 Tax=Burkholderiales RepID=Q46NS6_RALEJ Length = 313 Score = 190 bits (485), Expect = 4e-47, Method: Composition-based stats. Identities = 55/315 (17%), Positives = 103/315 (32%), Gaps = 21/315 (6%) Query: 7 TLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTP 66 L L L L L + +++++A +N T +SK L L PLF GL PTP Sbjct: 6 RLRLRNLQMLLSLAETGNMSQSAALLNTTQPGLSKWLKDLEDDIGLPLFERQARGLQPTP 65 Query: 67 LMVSMEQNLAEWMQMSNLLLDKPHHQT-PRGLKFELAAESPLMMIMLNALSKQIYQRYPQ 125 S+ ++ + D + + Q+ QR P+ Sbjct: 66 YGESLIEHARRITAQLDTARDDLAAMREGGSGLVVVGTSGASAADTVPLAVLQLLQRMPR 125 Query: 126 ATIKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 A ++L D ++ + E+DI + + + E L+ + Sbjct: 126 AQVRLVETTMDRLMNQLAHNELDIVVGRSAPELQDAQTIG--------ESLYLEPIHFVA 177 Query: 185 RKDHPALHQ-TWNLDTFLRYPHISICWEQSDTWALDNVLQELGRE-RTIAMSLPEFEQSL 242 R HP T + Y + AL+ L GR + +L Sbjct: 178 RPRHPLATPNTVTWEALQSYRWVVWPRGTPIRNALEAALASAGRPLPADCVESNSTVLNL 237 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 + D + LA+ R + +L L +V L L ++ W + + + Sbjct: 238 TLLNSSDMIGLASH-RTARRLEELGALRIVPLRLA--------GFGSVSMYWREDSVNRS 288 Query: 303 KIVWLRETIKNLYAS 317 + + + ++ Sbjct: 289 AVAAMLDCLRRAADR 303 >UniRef50_B5I3M3 Transcriptional regulator n=1 Tax=Streptomyces sviceus ATCC 29083 RepID=B5I3M3_9ACTO Length = 306 Score = 190 bits (485), Expect = 4e-47, Method: Composition-based stats. Identities = 49/316 (15%), Positives = 98/316 (31%), Gaps = 26/316 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +DL L + ++ AA+R+ +T A+S+ ++KL L + +S T Sbjct: 1 MDLRRLRYFLAVAEDLHFGHAAERLGITQPALSQQVSKLEMELGATLIERTSRTVSLTEA 60 Query: 68 MVSMEQNLAEWMQMSNLL-LDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + L + + + G + +L ++I P Sbjct: 61 GRDVLGPLRRCVAAYEEARVVARRAPSSGGGVLRIGFPRGESSTVLTPFLRRIAHGAPGI 120 Query: 127 TIKLRNWD-YDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 ++L + A+ GE+D+GF L L + V+ D V + Sbjct: 121 RMELTDVPCERQAVAVREGELDVGF----------MHLPILEPNLTPLVIRRDRLVVVMP 170 Query: 186 KDHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQEL-GRERTIAMSLPEFEQSLF 243 +HP ++ + P I + L G I + E ++ Sbjct: 171 GNHPCAKDRFVDIRSLEEEPFIGVRLRCPAYTDALGTLARHGGFRPRIEIETNGIEATVS 230 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 M A D L +A P + + + + H+ +P Sbjct: 231 MVA--DRLGVAIVPGAGVQ---------RHPGVAIRDISPAPHRLDLAFVLHQD-QRSPV 278 Query: 304 IVWLRETIKNLYASMA 319 + +R ++ A Sbjct: 279 LRTMRRVVQEASREKA 294 >UniRef50_Q0B7J0 Transcriptional regulator, LysR family n=1 Tax=Burkholderia ambifaria AMMD RepID=Q0B7J0_BURCM Length = 298 Score = 190 bits (485), Expect = 4e-47, Method: Composition-based stats. Identities = 39/312 (12%), Positives = 100/312 (32%), Gaps = 24/312 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L +L + + T+AAK+++V+ S +S ++ +L LF ++ Sbjct: 1 MELRHLRSFNVLAECANFTQAAKQLHVSQSTLSHTIKQLEDELKVELFDRVGKRVTLNRD 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHH-QTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 +A + + + + + + + S + +L + + P Sbjct: 61 GKQFLGTVARTLGELDSGIVSLRNCISELSGELRIGTTSTFNVRLLPGCVSEFLTQNPTV 120 Query: 127 TIKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + + S+ + + G++D+G S + +E LF++ ++ Sbjct: 121 HVTIAELPGKSIEERVRNGQLDVGICYTPSDTG----------GLWFEPLFNEELVIFAP 170 Query: 186 KDHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 +HP + + R P I E L+ + + + T + + Sbjct: 171 LNHPLAKRRRIRMVELHRQPLILPSAEVGARHILNACFRAVHAQPTPVAEINSIVPMFEL 230 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 ++ + + + + P P LL + + Sbjct: 231 -SRSLRI-PTIGSEFLSKAVSDFAVVRIVDPKPIRTPV---------LLQKQDGPQSATS 279 Query: 305 VWLRETIKNLYA 316 + +K A Sbjct: 280 KAFADILKRQCA 291 >UniRef50_C7QKA9 Transcriptional regulator, LysR family n=1 Tax=Catenulispora acidiphila DSM 44928 RepID=C7QKA9_CATAD Length = 299 Score = 190 bits (485), Expect = 5e-47, Method: Composition-based stats. Identities = 43/314 (13%), Positives = 86/314 (27%), Gaps = 20/314 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++ L+ Q + S T+AA +N S+V+ + L A LF + T Sbjct: 1 MEFQQLVTFQRVATVLSFTRAAADLNYAQSSVTNQIRNLEASLQTELFDRLGSKIQLTDA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQAT 127 + + + +++ + + L L + + RYP Sbjct: 61 GQRLLLHAERLLALADEARADVAGPAEPSGTLTIGTMESITSYRLPPLLELFHYRYPAVH 120 Query: 128 IKLRN-WDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRK 186 + LR D+ A+ +G D+GF +D VL + + Sbjct: 121 LALRPSLCADTCRALRQGTFDVGFLMEPDTG---------HAGLDSVVLSKERLVLVAAP 171 Query: 187 DHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMA 245 P ++ + P ++ S + L + E Sbjct: 172 SFPLASAPTVTIEALRKVPVLATESGCSYRDLFEIELTAEQLTPASFLEFGTIEAIKRGV 231 Query: 246 AQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIV 305 L ++ P V EV L W + + ++ Sbjct: 232 IA--GLGVSLLPEITVADEIASGSLTV-------LPWTPPFEVVIQLAWRRGKRLSRELQ 282 Query: 306 WLRETIKNLYASMA 319 + L + Sbjct: 283 LFIDQTIRLVREES 296 >UniRef50_Q7D0H0 Transcriptional regulator, LysR family n=12 Tax=Rhizobium/Agrobacterium group RepID=Q7D0H0_AGRT5 Length = 295 Score = 190 bits (485), Expect = 5e-47, Method: Composition-based stats. Identities = 46/313 (14%), Positives = 88/313 (28%), Gaps = 24/313 (7%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 + LDL + + S + AA + +T AVS + L L P Sbjct: 1 MIDLDLRQMRSFMDVADLGSFSAAADKAGLTQPAVSLHIRLLEKQLGVRLIERVGRRAQP 60 Query: 65 TPLMVSMEQNLAEWMQMSNLLLDKPH-HQTPRGLKFELAAESPLMMIMLNALSKQIYQRY 123 T + + ++ H++ + + + +L + +I Q Sbjct: 61 TAAGRDFLIHARRISEEVAHAIETVAPHRSGATGSLRIGTGATACIYLLPPVLGRIRQAM 120 Query: 124 PQATIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCV 182 P I ++ +D L + +D + RS +D + D Sbjct: 121 PGIDIVVQTGNTHDILRLLEANTIDAAVVALPASGRS----------LDIRDIHLDELVA 170 Query: 183 WLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 + T +T + + +D GR AM L E Sbjct: 171 VFPRGAVPARTTLTAETLSTRSLLLYE-GGNTRKLVDQWFSASGRTVQPAMELGSVEAIK 229 Query: 243 FMAAQPDNLLLATAPRYC-QYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 + L LA PR ++ L +L P + L + Sbjct: 230 KL--AGAGLGLAVVPRMAVEHEGAASGLEWRSLEPPLE--------RRIALAMRRDKHMT 279 Query: 302 PKIVWLRETIKNL 314 + L + ++ Sbjct: 280 APLRALAGALPDV 292 >UniRef50_C2AM94 Transcriptional regulator, COG0583 n=1 Tax=Tsukamurella paurometabola DSM 20162 RepID=C2AM94_TSUPA Length = 299 Score = 190 bits (485), Expect = 5e-47, Method: Composition-based stats. Identities = 44/313 (14%), Positives = 93/313 (29%), Gaps = 25/313 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L + + + T+AA+R +V SA+S +A L LF + + T Sbjct: 1 MELQQLRYVIATAETLNFTRAAERCHVVQSALSHQIAALERELGARLFDRTNRAVRLTAA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHH-QTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + + D+ + + + + ++ + YP A Sbjct: 61 GEAFLPQARAALAATERAADEVASTLGSVRGTVTVGMIPTFTVFDVVDVLRRYRRAYPDA 120 Query: 127 TIKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 +++R+ + LD + RG +D+ F G + + L + + Sbjct: 121 AVRVRSGASEILLDEVRRGTLDLAFLGVPEGFSTA--------GVIARELRFERLVLVAS 172 Query: 186 KDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMA 245 + + L P + + D G R++ + E L + Sbjct: 173 QARGLVG-PLALADLADEPFVDYPAGGAGRAETDLAFAAAGVHRSVPFEVDRSETMLALI 231 Query: 246 AQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIV 305 A + A L V L L+ K +P Sbjct: 232 AAGLCVGTAAL----GTVPDGAGLATVDL--------LDGPTRTQYLVHSK--LLSPAAR 277 Query: 306 WLRETIKNLYASM 318 L + + + Sbjct: 278 ALLSIVDRTLSEV 290 >UniRef50_B4S2V4 Transcriptional regulator, LysR family protein n=2 Tax=Alteromonas macleodii RepID=B4S2V4_ALTMD Length = 311 Score = 190 bits (485), Expect = 5e-47, Method: Composition-based stats. Identities = 71/321 (22%), Positives = 124/321 (38%), Gaps = 23/321 (7%) Query: 2 KKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLG 61 + LDLNLL + L Q R++T+ A+ +++TPSAVS ++ + R DPLFV Sbjct: 8 HRQFEKLDLNLLKVFEALWQHRNMTRVAEALHITPSAVSHAMRRFRDILGDPLFVKEKQS 67 Query: 62 LSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTP--RGLKFELAAESPLMMIMLNALSKQI 119 + PT + + + + L + P +F +A + L + +L AL + Sbjct: 68 MLPTAACERLAPAILKALNDIRKALGEFVDFDPLHSHQRFVIAMQESLELGVLPALLSTL 127 Query: 120 YQRYPQATIKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSD 178 ++ P I D L +T + + + I + +L D Sbjct: 128 EKQAPNIEIVSTRLHRDTILADLTNRNLHLVIDIGRAVAAP----------ISHSLLRRD 177 Query: 179 VPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEF 238 V + K +P Q+ + ++ HI++ + LQ+LG R + Sbjct: 178 TYKVLMNKQNPLA-QSLDKKRYVAARHITVSNRAKGASVEEIALQQLGVSRPSLWRCQNY 236 Query: 239 EQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRN 298 + + A D LL T P L LP E+ L WH + Sbjct: 237 RAAADVVANTDALL--TLPGSVADAVNDDNLISTKLPYQLP-------ELETHLYWHSQQ 287 Query: 299 SHNPKIVWLRETIKNLYASMA 319 P ++WLR+ + +L+A Sbjct: 288 EGEPGLMWLRDLMLHLFAESG 308 >UniRef50_Q67MJ1 LysR family transcriptional regulator n=1 Tax=Symbiobacterium thermophilum RepID=Q67MJ1_SYMTH Length = 273 Score = 190 bits (484), Expect = 5e-47, Method: Composition-based stats. Identities = 43/288 (14%), Positives = 75/288 (26%), Gaps = 26/288 (9%) Query: 34 VTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSMEQNLAEWMQMSNLLLDKPHH-Q 92 V ++S+ + +L LF S + T ++ + ++ Sbjct: 2 VAQPSLSQQIRRLEEELGVLLFDRSRTPVRLTDAGEALLPHAEAILRQVEAAGAAVEERI 61 Query: 93 TPRGLKFELAAESPLMMIMLNALSKQIYQRYPQATIKLRNWDYDSLDAIT-RGEVDIGFS 151 R + L + +L QRYP I LR L + E D+ + Sbjct: 62 GLRSGRLVLGSLPVTGSRLLPRAITAYRQRYPGVQITLREEPTQRLTELALADETDLTLT 121 Query: 152 GRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPALHQ-----TWNLDTFLRYPHI 206 +D++ L ++ + L DHP L P + Sbjct: 122 TLPVGSD----------ELDWQPLLTEPILLALPPDHPLAADGPPHPAIPLSAVAGEPFL 171 Query: 207 SICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQPDNLLLATAPRYCQYYNQL 266 + + Q G IA + E M A L + P+ + Sbjct: 172 IMKPGYGFRDLVLAACQAAGFSPQIAFESAQIETLQAMVAA--GLGVTLVPQMAADRSLR 229 Query: 267 HQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWLRETIKNL 314 V L L L W + + L Sbjct: 230 PSPVFVPL-------AGAPLTRTLALAWRRDRPLPRSAQAFLKLASEL 270 >UniRef50_A3NJ16 Transcriptional regulator, LysR family n=17 Tax=Proteobacteria RepID=A3NJ16_BURP6 Length = 317 Score = 190 bits (484), Expect = 5e-47, Method: Composition-based stats. Identities = 54/308 (17%), Positives = 106/308 (34%), Gaps = 20/308 (6%) Query: 13 LLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSME 72 L + + S+ A+++++V SA+S+ +AKL PLF P G+ T + Sbjct: 13 LKYFVEVARTGSLAAASQQLHVAVSAISRQIAKLEEQVGTPLFERMPRGMILTEAGELLV 72 Query: 73 QNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNALSKQIYQRYPQATIKLR 131 Q+ + + +L + G + L ++ Y+++P+ +R Sbjct: 73 QHARRALMDGDAVLAEISEIHALGLGIVRIGCTEGFTRCFLPSVMATHYRQHPRTRFVMR 132 Query: 132 NWDYDSLD-AITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPA 190 + ++ + GEVD+G + S + + S+ C L HP Sbjct: 133 SGTPAQVEHWVASGEVDMGLAFSTSTSTALSVEYSVKA----------PVCALLPPTHPL 182 Query: 191 LHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQPD 249 +T LD L+YP + + +D G ++ AA Sbjct: 183 AGRTSVTLDDILQYPTAVLDRGTTVRQLIDLCCSARGVHLEPILTSNNSSAMHHFAALT- 241 Query: 250 NLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWLRE 309 T L+A+P+ ++ L+V + P +V + Sbjct: 242 --GTITLGSQVALEGNPGPPTLIAMPIDEPLLNERLLQVTVM----RERRLPPAVVQFLK 295 Query: 310 TIKNLYAS 317 T+ N Sbjct: 296 TLSNALRE 303 >UniRef50_D2LJB2 Transcriptional regulator, LysR family n=1 Tax=Rhodomicrobium vannielii ATCC 17100 RepID=D2LJB2_RHOVA Length = 311 Score = 190 bits (484), Expect = 5e-47, Method: Composition-based stats. Identities = 55/319 (17%), Positives = 104/319 (32%), Gaps = 26/319 (8%) Query: 7 TLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSP-LGLSPT 65 + L LL + +VT+AA+++ V+ +VS ++A+L +FV G++ T Sbjct: 2 NISLRLLRYVTAAADSGNVTEAARKLQVSQPSVSAAIAELEQMLGIAIFVRHHAKGVTLT 61 Query: 66 PLMVSMEQNLAEWMQMSNLLLDKPHHQ-TPRGLKFELAAESPLMMIMLNALSKQIYQRYP 124 P + ++ ++ + + L + A+ +RYP Sbjct: 62 PAGQKLIAEARLLLKHADEFSKSAESLGDTERGEVTVGCFPTLAACYMPAIMTDFSKRYP 121 Query: 125 QATIKLRNWD-YDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVW 183 ++L D L + G V++GF+ ++P +D VL V Sbjct: 122 LIQLRLAEGDQERLLADVVNGRVELGFTFNY----------AVPSTLDTTVLMKLPFVVC 171 Query: 184 LRKDHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 L DH +L P I +Q + V +G + + FE Sbjct: 172 LPPDHRLAKAPDVSLHDLKDDPMIFF-GDQLIAGYIMRVFDAVGVSPIVRQRIATFEVMR 230 Query: 243 FMAAQPDNLL--LATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 + A+ +AT +V P+ + + V S Sbjct: 231 GLVARGHGYSVHVATPSSS----TSYDGGKVVVKPIRDIVPKAEIACVALGA-----QSM 281 Query: 301 NPKIVWLRETIKNLYASMA 319 P + E + A Sbjct: 282 RPAVRLFAEFLAASLGQPA 300 >UniRef50_B5I0V5 LysR-family transcriptional regulator n=10 Tax=Actinomycetales RepID=B5I0V5_9ACTO Length = 300 Score = 190 bits (484), Expect = 6e-47, Method: Composition-based stats. Identities = 55/311 (17%), Positives = 107/311 (34%), Gaps = 19/311 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 L+L L L L + SV+ AA+ +++T SAVS+ ++KL L + G+ T Sbjct: 2 LNLERLRTLDALARHGSVSGAAEGLHITTSAVSQQMSKLEREVGQQLLAKNGRGVRLTDA 61 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + A + + Q + + LAA + + A + +P Sbjct: 62 GRLLADHAARILSQVEVAQSDLEAQRGQVVGELRLAAFPTAVRGLFPAAIAGLRSAHPAL 121 Query: 127 TIKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 I R + + ++ A+ RG+ D+ + +P + + D V + Sbjct: 122 RISSREMEPEAAVLAVIRGDYDLAVVLDWYNKPL-----PMPDGLVKASIVDDTADVAMP 176 Query: 186 KDHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 H +L+ F ++ + L + L+ G E +A E L + Sbjct: 177 ATHRHAHRDEVDLEDFADDDWVTWGEGEFCDEWLMHTLRSKGIEPRVAHRAEEHPTQLAL 236 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 L + APR + V + ++ + +W P I Sbjct: 237 V--GAGLGVCVAPRLG-RGPIPQGVRTVPV--------RQSVRRHIYAVWRADADRRPSI 285 Query: 305 VWLRETIKNLY 315 E +K+ Sbjct: 286 RAAVEALKSAA 296 >UniRef50_B8J696 Transcriptional regulator, LysR family n=3 Tax=Anaeromyxobacter RepID=B8J696_ANAD2 Length = 296 Score = 190 bits (484), Expect = 6e-47, Method: Composition-based stats. Identities = 35/287 (12%), Positives = 91/287 (31%), Gaps = 18/287 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L + +E +AA R+ + +S+ + +L LF+ + + T Sbjct: 1 MELRHLRYFVAVAEELHFGRAAARLGIAQPPLSQQIRQLERELGVELFLRARRRVELTEP 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQT-PRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + +Q ++ + + + ++ + + R+P Sbjct: 61 GRVLLGHARAVLQRASQAAEDVRRAARGETGALSVGVVASATYGVVPRVFRTFRARHPDV 120 Query: 127 TIKL-RNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + + + A+ G++D+G + + + E + + V L Sbjct: 121 ALGVAVMSTGAQVAALRAGQLDLGLARTPFGDET----------LVAETVLEEPVVVALP 170 Query: 186 KDHPALHQTWNLDTFLR-YPHISIC--WEQSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 HP + L P + + + +E G +A PE ++ Sbjct: 171 AGHPLSARRALRLAALAPEPFVLFPRDRRPGWYDFVLGLCREAGFRPRVAEDAPELATAM 230 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVP 289 + A + + P + + + + P ++ L P Sbjct: 231 ALVAA--GIGVTLVPASVKDL-RRSGVDYRPIAAPRARTRLVALRRP 274 >UniRef50_B8H865 Transcriptional regulator, LysR family n=1 Tax=Arthrobacter chlorophenolicus A6 RepID=B8H865_ARTCA Length = 306 Score = 190 bits (484), Expect = 6e-47, Method: Composition-based stats. Identities = 47/321 (14%), Positives = 97/321 (30%), Gaps = 27/321 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 L L + +E AA+R+N+T +S+ + L + LF + + T Sbjct: 2 FSLPQLEAFVAVAEELHFGAAAERLNMTQPPLSRQIQMLEKKLNTTLFSRTSRKVELTAA 61 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNALSKQIYQRYPQA 126 ++ + + M + + + L + ++ + P Sbjct: 62 GATLLPRARQILDMCIKTDMDVRRVSSGQAGTITVGYTAIAGQSALPMMLRKAAEGMPGV 121 Query: 127 TIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + LR D +D + +G VDIG + + L D V + Sbjct: 122 SFVLRELVSTDQMDGLVKGSVDIGLLRPIVARP----------GVVFRPLMQDRLVVAVP 171 Query: 186 KDHPAL-------HQTWNLDTFLRYPHISICWEQS--DTWALDNVLQELGRERTIAMSLP 236 + P L Q L + R P + +++ + + G I Sbjct: 172 EGSPVLGNTRIPDGQPLPLGSLDRRPLLMYSTKEARYFHDLVLRLFASAGAHANITQYAS 231 Query: 237 EFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHK 296 + L L + P + + + Q+ V L W++ Sbjct: 232 QVPALLAFVQA--GLGVTLVPASAMAFA---PPGVEFHEIDGRHGMQELNRVDLELAWNE 286 Query: 297 RNSHNPKIVWLRETIKNLYAS 317 NP ++ L + I ++ Sbjct: 287 ET-ANPAVLRLLDLIGESVSA 306 >UniRef50_D0KYG7 Transcriptional regulator, LysR family n=3 Tax=Gammaproteobacteria RepID=D0KYG7_HALNC Length = 312 Score = 190 bits (484), Expect = 6e-47, Method: Composition-based stats. Identities = 53/311 (17%), Positives = 101/311 (32%), Gaps = 24/311 (7%) Query: 11 NLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVS 70 L + + S TKAA+ ++ T AV+ + +L FD LF + ++ T + Sbjct: 4 RRLKVFNTVARLLSFTKAAEALHTTQPAVTFQVRQLEEHFDTRLFDRTHNRVTLTDVGHV 63 Query: 71 MEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQIYQRYPQATIK 129 + + ++ + + + T G + A + + ML AL + ++ ++ Sbjct: 64 VYEISERMFELYDEMDRRVKEMTGEVGGSLNIGASTTIAENMLPALLGKFRLKHRDLAVR 123 Query: 130 L-RNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDH 188 L + + VD+ + E D V L DH Sbjct: 124 LKVGNTEAIVSMVEHNVVDLAIVEGTVGN----------KNLLVETCRRDELVVILPPDH 173 Query: 189 PALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRE--RTIAMSLPEFEQSLFMA 245 ++ +LD + Y I + N L E G + M L E Sbjct: 174 QLAGLESVSLDQLMSYDFICREEGSGTREMVLNYLIEHGYSDGWDVCMELGSPEAIKGAV 233 Query: 246 AQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIV 305 + L+ L L A+PL +L F+ + + P + Sbjct: 234 QA--GMGLSIMSASGITKELKLGL-LKAVPL------SPRLFRDFSFVRQRHKFRLPAME 284 Query: 306 WLRETIKNLYA 316 L E ++ + Sbjct: 285 DLLEFSRDYCS 295 >UniRef50_C3MFM7 Putative transcriptional regulator, LysR family n=1 Tax=Rhizobium sp. NGR234 RepID=C3MFM7_RHISN Length = 409 Score = 190 bits (484), Expect = 6e-47, Method: Composition-based stats. Identities = 73/325 (22%), Positives = 129/325 (39%), Gaps = 28/325 (8%) Query: 4 SITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLS 63 ++ DLNLL L++ERSVT+A +I ++ AVS +L +LR DD LF+ + Sbjct: 44 NLNAFDLNLLRVFDALIRERSVTRAGDQIGLSQPAVSSALRRLRDLLDDQLFIRRGNDMI 103 Query: 64 PTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPR--GLKFELAAESPLMMIMLNALSKQIYQ 121 PTP + + + + + L L K H P +F L ++ ++ALS+ + Sbjct: 104 PTPRALELGSPVRDALGKIELALHKRRHFDPATIQRRFTLLGSDIFSVMAMSALSRCCAE 163 Query: 122 RYPQATIKLRNWD-YDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 P ++ L + ++ + VDI E ++P + L + Sbjct: 164 EAPGISLHLVDSALGNAERLLQEDAVDIAL----------ETELNVPDWVSSMPLLAAPY 213 Query: 181 CVWLRKDHP-------ALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAM 233 V HP A + LD F R H++ +D L ++GR+R +A+ Sbjct: 214 VVVASARHPGITAAGVAAREAIPLDLFCRLHHVARSSAGVVNCVVDAELAKVGRKRHVAL 273 Query: 234 SLPEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLL 293 ++P A +L ++ + L + P+P + + Sbjct: 274 TMPHTLGVAVATANSLHLA-TVPRQFAELMASHLGLKIYEAPVPLPATN-------INVF 325 Query: 294 WHKRNSHNPKIVWLRETIKNLYASM 318 WH R+ +P WLR I + Sbjct: 326 WHSRHDGDPAHQWLRRQIVRVRDEF 350 >UniRef50_B9MIR3 Transcriptional regulator, LysR family n=4 Tax=Burkholderiales RepID=B9MIR3_DIAST Length = 299 Score = 190 bits (484), Expect = 6e-47, Method: Composition-based stats. Identities = 45/314 (14%), Positives = 89/314 (28%), Gaps = 24/314 (7%) Query: 7 TLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTP 66 + L L + SV+ AAK ++VT S L ++ PL+ + T Sbjct: 2 NITFRQLRLFLALAETGSVSAAAKLMHVTQPTASMQLREVAQAVGVPLYEVVSRRVYLTE 61 Query: 67 LMVSMEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNALSKQIYQRYPQ 125 ++ + + + ++A S + L + +PQ Sbjct: 62 AGQALARTARAIASEWDAFEQGISGAKGLTSGRLKVAVVST-AKYFVPRLLGSFCKLHPQ 120 Query: 126 ATIKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 I L + D + + + D+ ++ VL + V Sbjct: 121 IDISLEVLNRDHVITRLRANQDDLYVMSMPPGDLP----------LEDHVLMPNPLVVIA 170 Query: 185 RKDHPA-LHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 H + L I A D L++LG + L E Sbjct: 171 PAGHRLAAKKRVALPQLQSERFILREKGSGTRMATDAHLRQLGFAPAAVLELGSNEAIKE 230 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 + + + + + L L + P+ + + L+W K +P Sbjct: 231 SVQGQLGVSIVSRHALGPHLDGLAILNVQGFPI----------QSQWHLVWPKGKRLSPI 280 Query: 304 IVWLRETIKNLYAS 317 R + + A Sbjct: 281 AEVFRGHLMDEAAG 294 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_A9VF88 Transcriptional regulator, LysR family n=77 Tax=... 278 2e-73 UniRef50_P39592 Uncharacterized HTH-type transcriptional regulat... 274 4e-72 UniRef50_A9W9P6 LysR substrate-binding n=3 Tax=Chloroflexus RepI... 272 1e-71 UniRef50_C6CY97 Transcriptional regulator, LysR family n=1 Tax=P... 271 2e-71 UniRef50_C6IV95 LysR family transcriptional regulator n=4 Tax=Ba... 270 7e-71 UniRef50_C6CYG5 Transcriptional regulator, LysR family n=2 Tax=P... 268 2e-70 UniRef50_P20668 HTH-type transcriptional regulator gltC n=17 Tax... 267 3e-70 UniRef50_B5EGJ2 Transcriptional regulator, LysR family n=5 Tax=G... 267 5e-70 UniRef50_Q3AG49 Transcriptional regulator, LysR family n=1 Tax=C... 266 9e-70 UniRef50_C6J455 LysR family transcriptional regulator n=2 Tax=Ba... 265 2e-69 UniRef50_B8K739 Transcriptional regulator, substrate-binding of ... 264 3e-69 UniRef50_Q04778 HTH-type transcriptional regulator alsR n=87 Tax... 263 4e-69 UniRef50_UPI0001745DD5 transcriptional regulator, LysR family pr... 263 5e-69 UniRef50_C0ZCK2 Transcriptional regulator n=1 Tax=Brevibacillus ... 263 5e-69 UniRef50_UPI00016C47B2 transcriptional regulator, LysR family pr... 263 6e-69 UniRef50_P37499 Uncharacterized HTH-type transcriptional regulat... 262 2e-68 UniRef50_B7IPY3 Transcriptional regulator, LysR family n=74 Tax=... 261 2e-68 UniRef50_D2P368 Transcription activator of glutamate synthase op... 261 2e-68 UniRef50_UPI00016945AE hypothetical protein Plarl_07755 n=1 Tax=... 261 3e-68 UniRef50_C0Z518 Transcriptional regulator n=3 Tax=Paenibacillace... 260 6e-68 UniRef50_A3I8L6 Transcriptional regulator, LysR family protein n... 259 1e-67 UniRef50_B9JIM7 Transcriptional regulator protein n=12 Tax=Prote... 257 3e-67 UniRef50_Q65GU9 Transcriptional regulator YbbE n=2 Tax=Bacillus ... 257 4e-67 UniRef50_Q1IRZ3 Transcriptional regulator, LysR family n=1 Tax=C... 256 1e-66 UniRef50_C0ZI27 Transcriptional regulator n=1 Tax=Brevibacillus ... 254 3e-66 UniRef50_B5JQV8 LysR substrate binding domain protein n=1 Tax=Ve... 253 4e-66 UniRef50_B7RZY7 LysR substrate binding domain protein n=1 Tax=ma... 253 5e-66 UniRef50_C6XIT5 Transcriptional regulator, LysR family n=1 Tax=H... 253 6e-66 UniRef50_Q3AG03 Transcriptional regulator, LysR family n=2 Tax=C... 253 7e-66 UniRef50_Q7N4W1 Hca operon transcriptional activator n=2 Tax=Pho... 251 3e-65 UniRef50_Q46WQ0 Transcriptional regulator, LysR family n=1 Tax=R... 250 3e-65 UniRef50_C7I3E5 Transcriptional regulator, LysR family n=1 Tax=T... 250 4e-65 UniRef50_A4ISN4 Transcriptional regulator LysR family n=6 Tax=Ge... 250 5e-65 UniRef50_B4WMZ4 Putative uncharacterized protein n=1 Tax=Synecho... 250 6e-65 UniRef50_C8WSN1 Transcriptional regulator, LysR family n=1 Tax=A... 250 7e-65 UniRef50_B5JN19 Putative uncharacterized protein n=1 Tax=Verruco... 250 7e-65 UniRef50_C2BX95 Transcriptional regulator n=1 Tax=Listeria grayi... 249 8e-65 UniRef50_C9KJ25 Transcriptional regulator GltC n=1 Tax=Mitsuokel... 249 8e-65 UniRef50_Q46MA3 Transcriptional regulator, LysR family n=1 Tax=R... 249 9e-65 UniRef50_C4ZHT7 Transcription activator of glutamate synthase(Ly... 248 2e-64 UniRef50_A1SY80 Transcriptional regulator, LysR family n=1 Tax=P... 248 2e-64 UniRef50_B8KMT5 Transcriptional regulator, LysR family n=1 Tax=g... 248 2e-64 UniRef50_A4F7Y9 Transcriptional regulator, LysR family n=3 Tax=A... 248 2e-64 UniRef50_B1ZUQ0 Transcriptional regulator, LysR family n=1 Tax=O... 248 2e-64 UniRef50_A9WGB3 LysR substrate-binding n=2 Tax=Chloroflexus RepI... 248 2e-64 UniRef50_Q1IHL3 Transcriptional regulator, LysR family n=1 Tax=C... 248 3e-64 UniRef50_A7ZAS3 YybE n=1 Tax=Bacillus amyloliquefaciens FZB42 Re... 247 3e-64 UniRef50_P27111 HTH-type transcriptional regulator cynR n=108 Ta... 247 3e-64 UniRef50_C8WUA0 Transcriptional regulator, LysR family n=1 Tax=A... 247 4e-64 UniRef50_Q0K6D4 Transcriptional regulator, LysR-family n=2 Tax=C... 247 4e-64 UniRef50_Q475G5 Regulatory protein, LysR:LysR, substrate-binding... 247 4e-64 UniRef50_C6D0W9 Transcriptional regulator, LysR family n=1 Tax=P... 247 5e-64 UniRef50_C7PVI0 Transcriptional regulator, LysR family n=11 Tax=... 247 5e-64 UniRef50_UPI000178812A transcriptional regulator, LysR family n=... 246 7e-64 UniRef50_A4J1K6 Transcriptional regulator, LysR family n=1 Tax=D... 246 8e-64 UniRef50_B9KYF2 RuBisCO operon transcriptional regulator n=1 Tax... 245 1e-63 UniRef50_B8FPA0 Transcriptional regulator, LysR family n=4 Tax=C... 245 1e-63 UniRef50_Q67SW7 LysR family transcriptional regulator n=1 Tax=Sy... 245 1e-63 UniRef50_A0JW92 Transcriptional regulator, LysR family n=3 Tax=M... 245 2e-63 UniRef50_A0L4T1 Transcriptional regulator, LysR family n=2 Tax=P... 245 2e-63 UniRef50_B9XBB1 Transcriptional regulator, LysR family n=2 Tax=V... 245 2e-63 UniRef50_C1F7X5 Transcriptional regulator, LysR family n=1 Tax=A... 245 2e-63 UniRef50_Q3M2K4 Transcriptional regulator, LysR family n=5 Tax=C... 244 3e-63 UniRef50_D1WWA8 Transcriptional regulator, LysR family n=7 Tax=S... 244 3e-63 UniRef50_C9KJX6 Transcriptional regulator, LysR family n=2 Tax=V... 244 3e-63 UniRef50_A0QNN2 Transcriptional regulator, LysR family protein n... 244 3e-63 UniRef50_Q5WCI6 LysR family transcriptional activator of glutama... 244 4e-63 UniRef50_A7ZAT2 Putative HTH-type transcriptional regulator n=2 ... 244 4e-63 UniRef50_B9Z480 Transcriptional regulator, LysR family n=1 Tax=L... 243 4e-63 UniRef50_C3AN59 Transcriptional regulator, LysR n=4 Tax=Bacilli ... 243 5e-63 UniRef50_D1BNW2 Transcriptional regulator, LysR family n=4 Tax=V... 243 5e-63 UniRef50_A6VV39 Transcriptional regulator, LysR family n=6 Tax=G... 243 5e-63 UniRef50_C1PEC2 Transcriptional regulator, LysR family n=1 Tax=B... 243 5e-63 UniRef50_UPI0001744D79 transcriptional regulator, LysR family pr... 243 5e-63 UniRef50_Q1AYT0 Transcriptional regulator, LysR family n=1 Tax=R... 243 6e-63 UniRef50_B9Y467 Putative uncharacterized protein n=1 Tax=Holdema... 243 6e-63 UniRef50_Q7WCW0 Probable LysR-family transcriptional regulator n... 243 6e-63 UniRef50_Q31FC6 Transcriptional regulator, LysR family n=7 Tax=P... 243 6e-63 UniRef50_Q2J7C4 Transcriptional regulator, LysR family n=22 Tax=... 243 7e-63 UniRef50_C6D0V7 Transcriptional regulator, LysR family n=4 Tax=B... 243 7e-63 UniRef50_Q9F1R2 HTH-type transcriptional activator cmpR n=38 Tax... 243 7e-63 UniRef50_C3LMU4 Transcriptional regulator, LysR family n=65 Tax=... 243 8e-63 UniRef50_C8VWS6 Transcriptional regulator, LysR family n=1 Tax=D... 243 8e-63 UniRef50_A6UMN5 Transcriptional regulator, LysR family n=1 Tax=S... 243 8e-63 UniRef50_Q47141 Hca operon transcriptional activator n=46 Tax=Ga... 243 8e-63 UniRef50_A9B3V4 Transcriptional regulator, LysR family n=1 Tax=H... 242 1e-62 UniRef50_C9PFK4 Transcriptional regulator substrate-binding of L... 242 1e-62 UniRef50_P25544 RuBisCO operon transcriptional regulator n=13 Ta... 242 1e-62 UniRef50_A9WIA6 LysR substrate-binding n=4 Tax=Chloroflexaceae R... 242 1e-62 UniRef50_Q2RHB2 Transcriptional regulator, LysR family n=1 Tax=M... 242 1e-62 UniRef50_Q2RHG4 Transcriptional regulator, LysR family n=1 Tax=M... 242 1e-62 UniRef50_C5BDD2 HTH-type transcriptional regulator AlsR n=2 Tax=... 242 2e-62 UniRef50_Q122V6 Transcriptional regulator, LysR family n=3 Tax=C... 242 2e-62 UniRef50_A1WVW1 Transcriptional regulator, LysR family n=11 Tax=... 242 2e-62 UniRef50_C0Z7P7 Probable transcriptional regulator n=1 Tax=Brevi... 242 2e-62 UniRef50_C1DGS2 Transcriptinal regulator, LysR family n=1 Tax=Az... 241 2e-62 UniRef50_A4FE82 LysR-family transcriptional regulator n=5 Tax=Ac... 241 2e-62 UniRef50_D1VD43 Transcriptional regulator, LysR family n=1 Tax=F... 241 2e-62 UniRef50_C1M4D9 Putative uncharacterized protein n=2 Tax=Citroba... 241 3e-62 UniRef50_B5WR38 Transcriptional regulator, LysR family n=2 Tax=B... 241 3e-62 UniRef50_C6BXQ9 Transcriptional regulator, LysR family n=1 Tax=D... 241 3e-62 UniRef50_A1W256 Transcriptional regulator, LysR family n=2 Tax=C... 241 3e-62 UniRef50_UPI0001694914 Transcriptional Regulator, LysR family pr... 241 3e-62 UniRef50_A9F7Y4 Transcriptional regulator, LysR family n=1 Tax=S... 240 4e-62 UniRef50_B5CN01 Putative uncharacterized protein n=2 Tax=Bacteri... 240 4e-62 UniRef50_Q1IRM1 Transcriptional regulator, LysR family n=1 Tax=C... 240 4e-62 UniRef50_C1F961 Transcriptional regulator, LysR family n=1 Tax=A... 240 4e-62 UniRef50_C6C982 Transcriptional regulator, LysR family n=1 Tax=D... 240 5e-62 UniRef50_A6SW66 Transcriptional regulator, LysR family n=1 Tax=J... 240 5e-62 UniRef50_C7I2X4 Transcriptional regulator, LysR family n=1 Tax=T... 240 5e-62 UniRef50_Q3MEY8 Transcriptional regulator, LysR family n=1 Tax=A... 240 5e-62 UniRef50_C6CWT6 Transcriptional regulator, LysR family n=5 Tax=B... 240 6e-62 UniRef50_A6SUU1 OxyR hydrogen peroxide-inducible genes activator... 240 6e-62 UniRef50_C0F0J2 Putative uncharacterized protein n=1 Tax=Eubacte... 240 7e-62 UniRef50_Q1AVR3 Transcriptional regulator, LysR family n=1 Tax=R... 240 7e-62 UniRef50_A3K7Z5 Regulatory protein, LysR:LysR, substrate-binding... 240 7e-62 UniRef50_A0LNI4 Transcriptional regulator, LysR family n=4 Tax=D... 239 8e-62 UniRef50_C3KKF8 Putative transcriptional regulatory protein, Lys... 239 1e-61 UniRef50_Q4ZQQ6 Regulatory protein, LysR:LysR, substrate-binding... 239 1e-61 UniRef50_B1Y5W5 Transcriptional regulator, LysR family n=2 Tax=B... 239 1e-61 UniRef50_P0ACQ6 Hydrogen peroxide-inducible genes activator n=27... 239 1e-61 UniRef50_C4V4C8 Transcriptional regulator n=2 Tax=Selenomonas Re... 238 1e-61 UniRef50_C0Z4V5 Transcriptional regulator n=1 Tax=Brevibacillus ... 238 2e-61 UniRef50_Q5X4A2 Hydrogen peroxide-inducible genes activator n=4 ... 238 2e-61 UniRef50_C6PMR8 Transcriptional regulator, LysR family n=1 Tax=C... 238 2e-61 UniRef50_A5D2L1 Transcriptional regulator n=1 Tax=Pelotomaculum ... 238 2e-61 UniRef50_Q11BY5 Transcriptional regulator, LysR family n=1 Tax=C... 238 2e-61 UniRef50_Q7W9G9 Probable LysR-family transcriptional regulator n... 238 2e-61 UniRef50_A0R3Z8 Transcriptional regulator, LysR family protein n... 238 3e-61 UniRef50_UPI00016945D8 transcriptional regulator, LysR family pr... 238 3e-61 UniRef50_Q0KE24 Transcriptional regulator, LysR-family n=2 Tax=C... 238 3e-61 UniRef50_B1HQK1 HTH-type transcriptional regulator n=3 Tax=Bacil... 238 3e-61 UniRef50_Q7W708 Putative LysR-family transcriptional regulator n... 238 3e-61 UniRef50_B9KVK0 Transcriptional regulator, LysR family n=1 Tax=R... 237 3e-61 UniRef50_Q7WNC1 LysR-family transcriptional regulator n=1 Tax=Bo... 237 3e-61 UniRef50_C1ZI46 Transcriptional regulator, COG0583 n=1 Tax=Planc... 237 3e-61 UniRef50_B8IJK2 Transcriptional regulator, LysR family n=1 Tax=M... 237 3e-61 UniRef50_C1SLV8 Transcriptional regulator, LysR family n=1 Tax=D... 237 3e-61 UniRef50_B5XVV4 Transcriptional regulator cynR n=5 Tax=Enterobac... 237 4e-61 UniRef50_A0K8T5 Transcriptional regulator, LysR family n=55 Tax=... 237 4e-61 UniRef50_Q1ATU8 Transcriptional regulator, LysR family n=1 Tax=R... 237 4e-61 UniRef50_B9TDR3 HTH-type transcriptional regulator xapR, putativ... 237 4e-61 UniRef50_Q4ZY05 Regulatory protein, LysR:LysR, substrate-binding... 237 4e-61 UniRef50_D2Q131 Transcriptional regulator, LysR family n=1 Tax=K... 237 4e-61 UniRef50_C9YBM2 Putative uncharacterized protein n=2 Tax=cellula... 237 5e-61 UniRef50_P52696 Uncharacterized HTH-type transcriptional regulat... 237 5e-61 UniRef50_Q67NJ1 LysR family transcriptional regulator n=1 Tax=Sy... 237 6e-61 UniRef50_A3VLP1 LysR family transcriptional regulatory protein n... 237 6e-61 UniRef50_A4XTW7 Transcriptional regulator, LysR family n=1 Tax=P... 237 6e-61 UniRef50_Q12H69 Transcriptional regulator, LysR family n=14 Tax=... 237 6e-61 UniRef50_Q12AP3 Transcriptional regulator, LysR family n=4 Tax=B... 237 6e-61 UniRef50_C6XZC9 LysR substrate-binding n=1 Tax=Pedobacter hepari... 236 7e-61 UniRef50_Q3SGH4 Oxidative stress transcriptional regulator n=2 T... 236 7e-61 UniRef50_P77559 Uncharacterized HTH-type transcriptional regulat... 236 7e-61 UniRef50_UPI000178A8A2 transcriptional regulator, LysR family n=... 236 7e-61 UniRef50_P96725 Uncharacterized HTH-type transcriptional regulat... 236 7e-61 UniRef50_Q632J2 Transcriptional regulator, LysR family n=5 Tax=B... 236 7e-61 UniRef50_A4J6T9 Transcriptional regulator, LysR family n=1 Tax=D... 236 7e-61 UniRef50_C6J497 Transcriptional regulator n=1 Tax=Paenibacillus ... 236 8e-61 UniRef50_C0CQ02 Putative uncharacterized protein n=1 Tax=Blautia... 236 8e-61 UniRef50_B7GI02 Transcriptional regulator, LysR family n=2 Tax=B... 236 8e-61 UniRef50_C4L1Y9 Transcriptional regulator, LysR family n=2 Tax=E... 236 9e-61 UniRef50_C6Q0M3 Transcriptional regulator, LysR family n=1 Tax=C... 236 9e-61 UniRef50_A9BVL3 Transcriptional regulator, LysR family n=3 Tax=C... 236 9e-61 UniRef50_Q826F8 Putative LysR-family transcriptional regulator n... 235 1e-60 UniRef50_B2I0F8 Transcriptional regulator n=13 Tax=Acinetobacter... 235 1e-60 UniRef50_A1WRQ7 Transcriptional regulator, LysR family n=2 Tax=B... 235 1e-60 UniRef50_Q46PT5 Transcriptional regulator, LysR family n=1 Tax=R... 235 1e-60 UniRef50_C0BY92 Putative uncharacterized protein n=5 Tax=Firmicu... 235 1e-60 UniRef50_A1TN88 Transcriptional regulator, LysR family n=9 Tax=B... 235 1e-60 UniRef50_B5JV63 LysR protein n=1 Tax=gamma proteobacterium HTCC5... 235 2e-60 UniRef50_C2FRR6 LysR family transcriptional regulator n=2 Tax=Sp... 235 2e-60 UniRef50_C1A9Z7 LysR family transcriptional regulator n=1 Tax=Ge... 235 2e-60 UniRef50_UPI0001C3192A transcriptional regulator, LysR family n=... 235 2e-60 UniRef50_C3I9W8 HTH-type transcriptional regulator alsR n=1 Tax=... 235 2e-60 UniRef50_A9G5G2 Nodulation protein D n=2 Tax=Proteobacteria RepI... 235 2e-60 UniRef50_A6T413 Transcriptional regulator, LysR family n=1 Tax=J... 235 2e-60 UniRef50_A5VFC0 Transcriptional regulator, LysR family n=2 Tax=P... 235 2e-60 UniRef50_B1Z4Z1 Transcriptional regulator, LysR family n=5 Tax=P... 234 2e-60 UniRef50_Q0ARX0 Transcriptional regulator, LysR family n=1 Tax=M... 234 2e-60 UniRef50_C7H9N7 Transcriptional regulator, LysR family n=2 Tax=F... 234 3e-60 UniRef50_B9IRL1 HTH_1, Bacterial regulatory helix-turn-helix pro... 234 3e-60 UniRef50_A8RPQ8 Putative uncharacterized protein n=2 Tax=Clostri... 234 3e-60 UniRef50_C5BQI4 Transcriptional regulator, LysR family n=1 Tax=T... 234 3e-60 UniRef50_C4Z2A4 LysR family transcriptional regulator, transcrip... 234 3e-60 UniRef50_Q5P743 Transcriptional regulator, LysR family n=2 Tax=B... 234 3e-60 UniRef50_B2JVU4 Transcriptional regulator, LysR family n=43 Tax=... 234 3e-60 UniRef50_C5BEX8 Transcriptional regulator, LysR family n=12 Tax=... 234 4e-60 UniRef50_B0TNB6 Transcriptional regulator, LysR family n=19 Tax=... 234 4e-60 UniRef50_B7X0F3 Transcriptional regulator, LysR family n=1 Tax=C... 234 4e-60 UniRef50_Q7W2A6 Transcriptional regulator n=3 Tax=Bordetella Rep... 233 4e-60 UniRef50_B5ELK2 Transcriptional regulator, LysR family n=2 Tax=A... 233 4e-60 UniRef50_C3X7G6 Transcriptional regulator n=2 Tax=Oxalobacter fo... 233 4e-60 UniRef50_Q21S72 Transcriptional regulator, LysR family n=2 Tax=C... 233 5e-60 UniRef50_B0N992 Putative uncharacterized protein n=2 Tax=Clostri... 233 5e-60 UniRef50_C8KY54 Transcriptional regulator, LysR family protein n... 233 5e-60 UniRef50_B6FPK4 Putative uncharacterized protein n=1 Tax=Clostri... 233 5e-60 UniRef50_B9ZSB8 Transcriptional regulator, LysR family n=4 Tax=B... 233 5e-60 UniRef50_Q13QG3 Transcriptional regulator, LysR family n=9 Tax=P... 233 5e-60 UniRef50_A8FAC2 Possible LysR family transcriptional regulator n... 233 5e-60 UniRef50_A6F002 Transcriptional regulator, LysR family protein n... 233 5e-60 UniRef50_O68014 HTH-type transcriptional regulator benM n=12 Tax... 233 5e-60 UniRef50_Q1IX51 Transcriptional regulator, LysR family n=3 Tax=D... 233 5e-60 UniRef50_Q7NKC0 Nitrogen assimilation transcriptional activator ... 233 6e-60 UniRef50_Q1AUB8 Transcriptional regulator, LysR family n=2 Tax=B... 233 7e-60 UniRef50_Q67KY5 LysR family transcriptional regulator n=1 Tax=Sy... 233 7e-60 UniRef50_C6D9U9 Transcriptional regulator, LysR family n=1 Tax=P... 233 8e-60 UniRef50_Q46YJ7 Transcriptional regulator, LysR family n=5 Tax=c... 233 8e-60 UniRef50_C0ZFW3 Transcriptional regulator n=1 Tax=Brevibacillus ... 233 9e-60 UniRef50_C0CUF5 Putative uncharacterized protein n=1 Tax=Clostri... 233 9e-60 UniRef50_A0KPM6 Transcriptional regulator, LysR family n=2 Tax=G... 232 9e-60 UniRef50_B5YJV7 Transcriptional regulator n=1 Tax=Thermodesulfov... 232 1e-59 UniRef50_C3NNS3 LysR family regulatory protein CidR n=22 Tax=Vib... 232 1e-59 UniRef50_C6MCJ5 Transcriptional regulator, LysR family n=1 Tax=N... 232 1e-59 UniRef50_Q2RZH0 Transcriptional regulator, LysR family n=1 Tax=S... 232 1e-59 UniRef50_A7GMD6 Transcriptional regulator, LysR family n=3 Tax=B... 232 1e-59 UniRef50_A5W6Q9 Transcriptional regulator, LysR family n=12 Tax=... 232 1e-59 UniRef50_A1W235 Transcriptional regulator, LysR family n=6 Tax=B... 232 1e-59 UniRef50_B8DKN9 Transcriptional regulator, LysR family n=4 Tax=P... 232 1e-59 UniRef50_C6C1H7 Transcriptional regulator, LysR family n=1 Tax=D... 232 1e-59 UniRef50_Q473Q1 Transcriptional regulator, LysR family n=9 Tax=B... 232 1e-59 UniRef50_A3TPW4 Putative transcriptional regulator n=1 Tax=Janib... 232 1e-59 UniRef50_Q1GX89 Transcriptional regulator, LysR family n=13 Tax=... 232 2e-59 UniRef50_Q1YDL8 Transcriptional regulator, LysR family n=1 Tax=A... 232 2e-59 UniRef50_C6D4H5 Transcriptional regulator, LysR family n=4 Tax=B... 232 2e-59 UniRef50_B9XJ57 Transcriptional regulator, LysR family n=2 Tax=b... 232 2e-59 UniRef50_B1J8H5 Transcriptional regulator, LysR family n=5 Tax=P... 231 2e-59 UniRef50_A5W321 Transcriptional regulator, LysR family n=3 Tax=P... 231 2e-59 UniRef50_B2Q0Q6 Putative uncharacterized protein n=1 Tax=Provide... 231 2e-59 UniRef50_B3JNA3 Putative uncharacterized protein n=1 Tax=Bactero... 231 2e-59 UniRef50_B4SSL0 Transcriptional regulator, LysR family n=8 Tax=X... 231 2e-59 UniRef50_B6R6F6 Transcriptional regulator, LysR family n=1 Tax=P... 231 3e-59 UniRef50_B0MH18 Putative uncharacterized protein n=4 Tax=Bacteri... 231 3e-59 UniRef50_Q2T4U0 Transcriptional regulator, LysR family n=2 Tax=B... 231 3e-59 UniRef50_B8CTJ9 Regulatory protein, LysR:LysR, substrate-binding... 230 4e-59 UniRef50_C6ARG9 Transcriptional regulator, LysR family n=7 Tax=P... 230 4e-59 UniRef50_B0V4K3 HTH-type transcriptional regulator n=13 Tax=Acin... 230 4e-59 UniRef50_B4X4B4 LysR substrate binding domain protein n=1 Tax=Al... 230 4e-59 UniRef50_Q12M05 Transcriptional regulator n=3 Tax=Gammaproteobac... 230 4e-59 UniRef50_Q1DBN8 Transcriptional regulator, LysR family n=2 Tax=C... 230 5e-59 UniRef50_A6GDN8 Transcriptional regulator n=1 Tax=Plesiocystis p... 230 5e-59 UniRef50_A6DK62 Hydrogen peroxide-inducible genes activator n=1 ... 230 5e-59 UniRef50_Q0F2Z7 Transcriptional regulatory protein, LysR family ... 230 5e-59 UniRef50_A8GI93 Transcriptional regulator, LysR family n=3 Tax=E... 230 6e-59 UniRef50_P73123 Probable RuBisCO transcriptional regulator n=81 ... 230 6e-59 UniRef50_B1I114 Transcriptional regulator, LysR family n=1 Tax=C... 230 7e-59 UniRef50_B4CXF3 Transcriptional regulator, LysR family n=1 Tax=C... 230 7e-59 UniRef50_O32255 Uncharacterized HTH-type transcriptional regulat... 230 7e-59 UniRef50_C7GBJ0 Transcriptional regulator, LysR family n=1 Tax=R... 230 7e-59 UniRef50_Q6MJZ8 Transcriptional regulator, LysR family n=1 Tax=B... 230 7e-59 UniRef50_Q3KA14 LysR family regulatory protein n=24 Tax=Bacteria... 230 7e-59 UniRef50_UPI000178A79D transcriptional regulator, LysR family n=... 229 8e-59 UniRef50_D2R7I4 Transcriptional regulator, LysR family n=6 Tax=P... 229 8e-59 UniRef50_Q1GMF7 Transcriptional regulator, LysR family n=1 Tax=R... 229 9e-59 UniRef50_A1WRT3 Transcriptional regulator, LysR family n=1 Tax=V... 229 9e-59 UniRef50_A0RKW5 Transcriptional regulator, LysR family n=81 Tax=... 229 1e-58 UniRef50_B7JB31 Rubisco operon transcriptional regulator n=5 Tax... 229 1e-58 UniRef50_Q2S713 Transcriptional regulator n=1 Tax=Hahella chejue... 229 1e-58 UniRef50_B6AZI7 Transcriptional regulator, LysR family n=1 Tax=R... 229 1e-58 UniRef50_P0ACR7 Uncharacterized HTH-type transcriptional regulat... 229 1e-58 UniRef50_C8T378 LysR family transcriptional regulator n=1 Tax=Kl... 229 1e-58 UniRef50_A0QCY6 Transcriptional regulator, LysR family protein n... 228 1e-58 UniRef50_Q2RLB0 Transcriptional regulator, LysR family n=1 Tax=M... 228 1e-58 UniRef50_B1J7P4 Transcriptional regulator, LysR family n=5 Tax=P... 228 2e-58 UniRef50_B5GYU9 LysR-family transcriptional regulator (Fragment)... 228 2e-58 UniRef50_B6IX78 Hydrogen peroxide-inducible genes activator n=1 ... 228 2e-58 UniRef50_B6R1K2 Transcriptional regulator, LysR family n=1 Tax=P... 228 2e-58 UniRef50_A6WDF3 Transcriptional regulator, LysR family n=1 Tax=K... 228 2e-58 UniRef50_C6E9D5 Transcriptional regulator, LysR family n=8 Tax=D... 228 2e-58 UniRef50_C1BAS4 Putative LysR family transcriptional regulator n... 228 2e-58 UniRef50_D1RNC3 Transcriptional regulatory protein n=1 Tax=Serra... 228 2e-58 UniRef50_B4T1W6 LysR family regulatory protein n=58 Tax=Enteroba... 228 2e-58 UniRef50_Q127N6 Transcriptional regulator, LysR family n=1 Tax=P... 228 2e-58 UniRef50_A3UQR4 Transcriptional regulator, LysR family n=1 Tax=V... 228 2e-58 UniRef50_C6IVL6 Transcriptional regulator YwqM n=1 Tax=Paenibaci... 228 2e-58 UniRef50_B1K332 Transcriptional regulator, LysR family n=6 Tax=B... 228 2e-58 UniRef50_A0AYH9 Transcriptional regulator, LysR family n=148 Tax... 228 2e-58 UniRef50_Q46S95 Transcriptional regulator, LysR family n=2 Tax=B... 228 2e-58 UniRef50_B1K9P6 Transcriptional regulator, LysR family n=22 Tax=... 228 2e-58 UniRef50_B4ETB5 LysR-family transcriptional regulator n=7 Tax=En... 228 2e-58 UniRef50_C3BJ72 YwqM (Probable transcriptional regulator YwqM) n... 228 2e-58 UniRef50_UPI000174499E transcriptional regulatory protein, LysR ... 228 2e-58 UniRef50_Q0BXT0 Putative oxidative stress regulatory protein Oxy... 228 2e-58 UniRef50_A9CLK9 Transcriptional regulator, LysR family n=2 Tax=A... 228 2e-58 UniRef50_Q97DV9 Transcriptional regulator, LysR family n=1 Tax=C... 228 2e-58 UniRef50_B4SSK9 Transcriptional regulator, LysR family n=3 Tax=S... 228 3e-58 UniRef50_A0QTM3 HTH-type transcriptional regulator AlsR n=7 Tax=... 228 3e-58 UniRef50_B4SKP4 Transcriptional regulator, LysR family n=24 Tax=... 228 3e-58 UniRef50_A1W2B9 Transcriptional regulator, LysR family n=6 Tax=C... 228 3e-58 UniRef50_A6VSP2 Transcriptional regulator, LysR family n=1 Tax=M... 227 3e-58 UniRef50_A0LD88 Transcriptional regulator, LysR family n=1 Tax=M... 227 3e-58 UniRef50_UPI0001C3125C transcriptional regulator, LysR family n=... 227 3e-58 UniRef50_C3BCJ4 Transcriptional regulator LysR n=1 Tax=Bacillus ... 227 3e-58 UniRef50_C6CZP2 Transcriptional regulator, LysR family n=5 Tax=c... 227 4e-58 UniRef50_Q12DG5 Transcriptional regulator, LysR family n=1 Tax=P... 227 4e-58 UniRef50_A8GKS5 Transcriptional regulator, LysR family n=1 Tax=S... 227 4e-58 UniRef50_Q2S7V2 Transcriptional regulator n=1 Tax=Hahella chejue... 227 4e-58 UniRef50_UPI0001BCF0E5 transcriptional regulator n=1 Tax=Selenom... 227 4e-58 UniRef50_B4SNU6 Transcriptional regulator, LysR family n=1 Tax=S... 227 5e-58 UniRef50_A0LBV6 Transcriptional regulator, LysR family n=1 Tax=M... 227 5e-58 UniRef50_A7ZTR6 HTH-type transcriptional regulator yidZ n=122 Ta... 227 5e-58 UniRef50_Q7NCX0 LysR family transcriptional regulatory protein n... 227 5e-58 UniRef50_Q5NYN4 Transcriptional regulator n=4 Tax=Rhodocyclaceae... 227 5e-58 UniRef50_C0ZGB6 Transcriptional regulator n=1 Tax=Brevibacillus ... 227 6e-58 UniRef50_C6NW00 Transcriptional regulator, LysR family n=1 Tax=A... 227 6e-58 UniRef50_A8IAC4 Transcriptional regulator n=1 Tax=Azorhizobium c... 227 6e-58 UniRef50_A9I810 Transcriptional regulator, LysR-family n=5 Tax=P... 227 6e-58 UniRef50_C8WRL7 Transcriptional regulator, LysR family n=2 Tax=A... 227 6e-58 UniRef50_Q1QWP3 Transcriptional regulator, LysR family n=1 Tax=C... 227 6e-58 UniRef50_Q1YUD1 Probable transcriptional regulator n=1 Tax=gamma... 227 6e-58 UniRef50_UPI0001B4610F LysR family transcriptional regulator n=1... 227 6e-58 UniRef50_B0KIN0 Transcriptional regulator, LysR family n=20 Tax=... 227 6e-58 UniRef50_C8X9S9 Transcriptional regulator, LysR family n=5 Tax=A... 226 7e-58 UniRef50_B0T3V7 Transcriptional regulator, LysR family n=1 Tax=C... 226 7e-58 UniRef50_A6VZS6 Transcriptional regulator, LysR family n=4 Tax=G... 226 7e-58 UniRef50_Q12BV9 Transcriptional regulator, LysR family n=5 Tax=c... 226 7e-58 UniRef50_Q0RXH6 Transcriptional regulator, LysR family protein n... 226 7e-58 UniRef50_A3ZYQ6 Transcriptional regulator, LysR family protein n... 226 7e-58 UniRef50_C3JEG8 Transcriptional regulator, LysR family protein n... 226 7e-58 UniRef50_B2JUD8 Transcriptional regulator, LysR family n=12 Tax=... 226 7e-58 UniRef50_A6VX33 Transcriptional regulator, LysR family n=2 Tax=M... 226 7e-58 UniRef50_Q13QG4 Transcriptional regulator, LysR family n=4 Tax=B... 226 7e-58 UniRef50_A9C046 Transcriptional regulator, LysR family n=2 Tax=c... 226 7e-58 UniRef50_C0D867 Putative uncharacterized protein n=1 Tax=Clostri... 226 7e-58 UniRef50_Q4KE95 Transcriptional regulator, LysR family n=7 Tax=P... 226 8e-58 UniRef50_B0C5B7 Transcriptional regulator, LysR-family n=1 Tax=A... 226 8e-58 UniRef50_B5CY17 Putative uncharacterized protein n=2 Tax=Bactero... 226 8e-58 UniRef50_B0BQD1 HTH-type transcriptional activator n=15 Tax=Prot... 226 8e-58 UniRef50_Q21IY2 Transcriptional regulator, LysR family n=2 Tax=G... 226 8e-58 UniRef50_D2S9A0 Transcriptional regulator, LysR family n=1 Tax=G... 226 8e-58 UniRef50_B1KAV0 Transcriptional regulator, LysR family n=5 Tax=B... 226 9e-58 UniRef50_Q28M96 Transcriptional regulator, LysR family n=3 Tax=R... 226 9e-58 UniRef50_A1VNR0 Transcriptional regulator, LysR family n=2 Tax=C... 226 9e-58 UniRef50_B9X9V4 Transcriptional regulator, LysR family n=1 Tax=b... 226 9e-58 UniRef50_A1TYB8 Transcriptional regulator, LysR family n=39 Tax=... 226 1e-57 UniRef50_A4G228 Transcriptional regulatory protein, LysR family ... 226 1e-57 UniRef50_C6CDR8 Transcriptional regulator, LysR family n=27 Tax=... 226 1e-57 UniRef50_C4DMI0 Transcriptional regulator, COG0583 n=2 Tax=Actin... 226 1e-57 UniRef50_C6CYK3 Transcriptional regulator, LysR family n=3 Tax=B... 226 1e-57 UniRef50_P0ACR6 Uncharacterized HTH-type transcriptional regulat... 226 1e-57 UniRef50_A1WHL2 Transcriptional regulator, LysR family n=10 Tax=... 226 1e-57 UniRef50_D1XD48 Transcriptional regulator, LysR family n=2 Tax=S... 226 1e-57 UniRef50_B8DQG2 Transcriptional regulator, LysR family n=6 Tax=B... 225 1e-57 UniRef50_B8IDW8 Transcriptional regulator, LysR family n=1 Tax=M... 225 1e-57 UniRef50_C7NK10 Transcriptional regulator n=1 Tax=Kytococcus sed... 225 1e-57 UniRef50_UPI0001788565 transcriptional regulator, LysR family n=... 225 1e-57 UniRef50_Q30XG7 Conserved hypothetical transcriptional regulator... 225 1e-57 UniRef50_D1CCM2 Transcriptional regulator, LysR family n=1 Tax=T... 225 1e-57 UniRef50_P94387 Uncharacterized HTH-type transcriptional regulat... 225 1e-57 UniRef50_A4JMP2 Transcriptional regulator, LysR family n=1 Tax=B... 225 2e-57 UniRef50_A0KPQ5 Transcriptional regulator n=1 Tax=Aeromonas hydr... 225 2e-57 UniRef50_Q39IT2 Transcriptional regulator, LysR family n=8 Tax=B... 225 2e-57 UniRef50_Q3A916 Transcriptional regulator, LysR family n=1 Tax=C... 225 2e-57 UniRef50_UPI0001B58B0A LysR family transcriptional regulator n=1... 225 2e-57 UniRef50_B0C1S6 Transcriptional regulator, LysR family n=2 Tax=C... 225 2e-57 UniRef50_B9Z173 Transcriptional regulator, LysR family n=1 Tax=L... 225 2e-57 UniRef50_B5HHH0 YwqM n=1 Tax=Streptomyces pristinaespiralis ATCC... 225 2e-57 UniRef50_C8NJC1 LysR family transcriptional regulator n=9 Tax=Co... 225 2e-57 UniRef50_Q67PU0 LysR family transcriptional regulator n=1 Tax=Sy... 225 2e-57 UniRef50_Q12BP5 Transcriptional regulator, LysR family n=1 Tax=P... 225 2e-57 UniRef50_B1Y3F3 Transcriptional regulator, LysR family n=2 Tax=B... 225 2e-57 UniRef50_B0MW77 Putative uncharacterized protein n=1 Tax=Alistip... 225 2e-57 UniRef50_UPI0001C42298 LysR family transcriptional regulator n=1... 225 2e-57 UniRef50_D1A8L0 Transcriptional regulator, LysR family n=2 Tax=A... 225 2e-57 UniRef50_Q65FY0 Probable transcriptional regulator YwqM n=1 Tax=... 225 2e-57 UniRef50_Q48IW5 Transcriptional regulator, LysR family n=8 Tax=P... 225 2e-57 UniRef50_B2JSH4 Transcriptional regulator, LysR family n=2 Tax=B... 225 2e-57 UniRef50_Q67MJ1 LysR family transcriptional regulator n=1 Tax=Sy... 225 2e-57 UniRef50_D0D0K4 Transcriptional regulator n=1 Tax=Citreicella sp... 225 2e-57 UniRef50_A8GG55 Transcriptional regulator, LysR family n=1 Tax=S... 225 2e-57 UniRef50_Q47V66 Substrate-binding transcriptional regulator, Lys... 225 2e-57 UniRef50_Q06610 RuBisCO operon transcriptional regulator n=4 Tax... 225 2e-57 UniRef50_A9B4C8 Transcriptional regulator, LysR family n=1 Tax=H... 225 2e-57 UniRef50_Q0A8N9 Transcriptional regulator, LysR family n=4 Tax=G... 225 2e-57 UniRef50_Q1R0T8 Transcriptional regulator, LysR family n=9 Tax=G... 224 2e-57 UniRef50_C7I0K1 Transcriptional regulator, LysR family n=1 Tax=T... 224 3e-57 UniRef50_B0C7Y6 Transcriptional regulator, LysR family n=1 Tax=A... 224 3e-57 UniRef50_A1U1I0 Transcriptional regulator, LysR family n=67 Tax=... 224 3e-57 UniRef50_A9FW21 Transcriptional regulator, LysR family n=2 Tax=M... 224 3e-57 UniRef50_C7JCS7 Transcriptional regulator LysR n=11 Tax=Proteoba... 224 3e-57 UniRef50_C0CT29 Putative uncharacterized protein n=1 Tax=Clostri... 224 3e-57 UniRef50_Q13T34 Transcriptional regulator, LysR family n=60 Tax=... 224 3e-57 UniRef50_C0VZJ2 Oxidative stress transcriptional regulator n=1 T... 224 4e-57 UniRef50_C1DL37 LysR family transcriptional regulator protein n=... 224 4e-57 UniRef50_C9KJW7 Transcriptional regulator, LysR family n=2 Tax=V... 224 4e-57 UniRef50_Q0K190 Transcriptional regulator, LysR-family n=1 Tax=R... 224 4e-57 UniRef50_A8ZUD0 Transcriptional regulator, LysR family n=1 Tax=D... 224 4e-57 UniRef50_Q1GMN1 Transcriptional regulator, LysR family n=1 Tax=R... 224 4e-57 UniRef50_A8FJ94 Possible LysR family transcriptional regulator n... 224 4e-57 UniRef50_B8FI63 Transcriptional regulator, LysR family n=1 Tax=D... 224 4e-57 UniRef50_Q3SFM8 Transcriptional regulator n=3 Tax=Proteobacteria... 224 4e-57 UniRef50_A9WDF5 LysR substrate-binding n=3 Tax=Chloroflexus RepI... 224 4e-57 UniRef50_C6W9R3 Transcriptional regulator, LysR family n=1 Tax=A... 223 4e-57 UniRef50_C5CVL6 Transcriptional regulator, LysR family n=5 Tax=c... 223 4e-57 UniRef50_P49518 Probable RuBisCO transcriptional regulator n=3 T... 223 4e-57 UniRef50_C4KB22 Transcriptional regulator, LysR family n=37 Tax=... 223 5e-57 UniRef50_Q1N6N4 Transcriptional regulator, LysR family protein n... 223 5e-57 UniRef50_A6ULR6 Transcriptional regulator, LysR family n=1 Tax=S... 223 5e-57 UniRef50_C0WB23 Transcriptional regulator n=1 Tax=Acidaminococcu... 223 5e-57 UniRef50_C0BKK6 Transcriptional regulator, LysR family n=1 Tax=F... 223 5e-57 UniRef50_B6IYM5 RuBisCO operon transcriptional regulator n=1 Tax... 223 5e-57 UniRef50_Q47TZ7 Putative LysR-family transcriptional regulator n... 223 5e-57 UniRef50_C3JGQ8 LysR-family transcriptional regulator n=2 Tax=Rh... 223 5e-57 UniRef50_D0SSL1 Transcriptional regulator n=2 Tax=Acinetobacter ... 223 5e-57 UniRef50_C0ZI31 Transcriptional regulator n=1 Tax=Brevibacillus ... 223 5e-57 UniRef50_A5G2D8 Transcriptional regulator, LysR family n=1 Tax=A... 223 5e-57 UniRef50_Q2T940 Transcriptional regulator, LysR family n=6 Tax=B... 223 5e-57 UniRef50_Q15UP0 Transcriptional regulator, LysR family n=4 Tax=A... 223 5e-57 UniRef50_Q74DH4 Transcriptional regulator, LysR family n=1 Tax=G... 223 6e-57 UniRef50_C6CDY7 Transcriptional regulator, LysR family n=10 Tax=... 223 6e-57 UniRef50_C1DMS0 Transcriptional regulator, LysR family n=1 Tax=A... 223 6e-57 UniRef50_D0IWI0 Transcriptional regulator, LysR family n=3 Tax=C... 223 6e-57 UniRef50_Q81BG8 Transcriptional regulators, LysR family n=8 Tax=... 223 6e-57 UniRef50_Q4ZRN4 Regulatory protein, LysR:LysR, substrate-binding... 223 7e-57 UniRef50_Q0EX23 Transcriptional Regulator, LysR family protein n... 223 7e-57 UniRef50_Q4KHB2 Transcriptional regulator, LysR family n=28 Tax=... 223 7e-57 UniRef50_C8W2B6 Transcriptional regulator, LysR family n=1 Tax=D... 223 7e-57 UniRef50_A6UGP0 Transcriptional regulator, LysR family n=2 Tax=S... 223 7e-57 UniRef50_UPI0001C36638 LysR family transcriptional regulator n=1... 223 7e-57 UniRef50_A8SVR7 Putative uncharacterized protein n=2 Tax=Clostri... 223 8e-57 UniRef50_Q7W5S7 LysR-family transcriptional regulator n=3 Tax=Bo... 223 8e-57 UniRef50_B1HZ14 Transcriptional regulator-like protein (LysR fam... 223 8e-57 UniRef50_D0J1D7 Transcriptional regulator, LysR family n=12 Tax=... 223 8e-57 UniRef50_Q7W108 Probable LysR-family transcriptional regulator n... 223 8e-57 UniRef50_B3DZ70 Transcriptional regulator, LysR/CysB family n=5 ... 223 9e-57 UniRef50_A6EYC4 LysR family regulatory protein n=1 Tax=Marinobac... 223 9e-57 UniRef50_Q9RYH7 Transcriptional regulator, HTH_1 family n=2 Tax=... 223 9e-57 UniRef50_A0R5A9 Transcriptional regulatory protein n=16 Tax=Bact... 222 9e-57 UniRef50_B4STD8 Transcriptional regulator, LysR family n=6 Tax=G... 222 1e-56 UniRef50_C7RSN5 Transcriptional regulator, LysR family n=1 Tax=C... 222 1e-56 UniRef50_Q30Z73 Transcriptional regulator, LysR family n=3 Tax=D... 222 1e-56 UniRef50_B7H3Y5 HTH-type transcriptional regulator alsR (Als ope... 222 1e-56 UniRef50_B3E4Z6 Transcriptional regulator, LysR family n=3 Tax=D... 222 1e-56 UniRef50_B7RU53 LysR substrate binding domain protein n=2 Tax=un... 222 1e-56 UniRef50_Q1IBR2 Putative transcriptional regulator, LysR family ... 222 1e-56 UniRef50_A9HWS6 Transcriptional regulator, LysR-family n=1 Tax=B... 222 1e-56 UniRef50_P42722 HTH-type transcriptional regulator cfxR n=9 Tax=... 222 1e-56 UniRef50_B4UKP3 Transcriptional regulator, LysR family n=4 Tax=A... 222 1e-56 UniRef50_C9NXV6 Transcriptional regulator LysR family n=1 Tax=Vi... 222 1e-56 UniRef50_B2JL76 Transcriptional regulator, LysR family n=10 Tax=... 222 1e-56 UniRef50_Q7WNE4 LysR-family transcriptional regulator n=1 Tax=Bo... 222 1e-56 UniRef50_C7MTU9 Transcriptional regulator, LysR family n=3 Tax=A... 222 1e-56 UniRef50_A4WZV0 Transcriptional regulator, LysR family n=1 Tax=R... 222 1e-56 UniRef50_Q0S8J9 Transcriptional regulator, LysR family protein n... 222 1e-56 UniRef50_B5GKV4 LysR-family transcriptional regulator (Fragment)... 222 1e-56 UniRef50_C6D056 Transcriptional regulator, LysR family n=1 Tax=P... 222 1e-56 UniRef50_D0J615 Transcriptional regulator, LysR family n=2 Tax=C... 222 1e-56 UniRef50_C6PQ28 Transcriptional regulator, LysR family n=2 Tax=F... 222 1e-56 UniRef50_A4A328 Transcriptional regulator, lysr family protein n... 222 1e-56 UniRef50_A5VEA0 Transcriptional regulator, LysR family n=1 Tax=S... 222 1e-56 UniRef50_B9MIR3 Transcriptional regulator, LysR family n=4 Tax=B... 222 1e-56 UniRef50_C9RA29 Transcriptional regulator, LysR family n=1 Tax=A... 222 2e-56 UniRef50_A1S338 Transcriptional regulator, LysR family n=16 Tax=... 222 2e-56 UniRef50_B4CZS1 Transcriptional regulator, LysR family n=1 Tax=C... 222 2e-56 UniRef50_A5W561 Transcriptional regulator, LysR family n=12 Tax=... 222 2e-56 UniRef50_A7IMC0 Transcriptional regulator, LysR family n=18 Tax=... 222 2e-56 UniRef50_UPI0000E0F9F3 Transcriptional Regulator, LysR family pr... 222 2e-56 UniRef50_A6VUM5 Transcriptional regulator, LysR family n=2 Tax=G... 222 2e-56 UniRef50_B2T513 Transcriptional regulator, LysR family n=65 Tax=... 222 2e-56 UniRef50_Q46Q42 Regulatory protein, LysR:LysR, substrate-binding... 222 2e-56 UniRef50_A9FB16 Transcriptional regulator, LysR family n=3 Tax=S... 222 2e-56 UniRef50_C0Z633 Transcriptional regulator n=3 Tax=Bacillales Rep... 222 2e-56 UniRef50_B9JZE6 Transcriptional regulator LysR family n=1 Tax=Ag... 222 2e-56 UniRef50_B8IVL1 Transcriptional regulator, LysR family n=2 Tax=P... 222 2e-56 UniRef50_UPI0001C3136F transcriptional regulator, MarR family n=... 222 2e-56 UniRef50_A1U2R6 Transcriptional regulator, LysR family n=3 Tax=M... 222 2e-56 UniRef50_C6DBU7 Transcriptional regulator, LysR family n=4 Tax=P... 222 2e-56 UniRef50_Q8XFS3 Probable transcription regulator protein n=1 Tax... 221 2e-56 UniRef50_B1YXM2 Transcriptional regulator, LysR family n=3 Tax=B... 221 2e-56 UniRef50_B2JVL8 Transcriptional regulator, LysR family n=1 Tax=B... 221 2e-56 UniRef50_D1RUJ7 Transcriptional regulatory protein n=1 Tax=Serra... 221 2e-56 UniRef50_C9LCS7 Putative transcriptional regulator n=1 Tax=Blaut... 221 2e-56 UniRef50_A6X5N5 Transcriptional regulator, LysR family n=37 Tax=... 221 2e-56 UniRef50_A9HZJ0 Transcriptional regulator, LysR-family n=2 Tax=B... 221 2e-56 UniRef50_A4W926 Transcriptional regulator, LysR family n=1 Tax=E... 221 3e-56 UniRef50_B5JLL8 Putative uncharacterized protein n=1 Tax=Verruco... 221 3e-56 UniRef50_D0KYG7 Transcriptional regulator, LysR family n=3 Tax=G... 221 3e-56 UniRef50_P20667 HTH-type transcriptional regulator catR n=15 Tax... 221 3e-56 UniRef50_Q39JP1 Transcriptional regulator, LysR family n=11 Tax=... 221 3e-56 UniRef50_Q13JD9 Transcriptional regulator, LysR family n=1 Tax=B... 221 3e-56 UniRef50_A1BA89 Transcriptional regulator, LysR family n=4 Tax=A... 221 3e-56 UniRef50_UPI0001C30F27 transcriptional regulator, LysR family n=... 221 3e-56 UniRef50_A5W7U4 Transcriptional regulator, LysR family n=17 Tax=... 221 3e-56 UniRef50_C6D237 Transcriptional regulator, LysR family n=2 Tax=B... 221 3e-56 UniRef50_B4DCH5 Transcriptional regulator, LysR family n=1 Tax=C... 221 3e-56 UniRef50_B2HU56 Transcriptional regulator n=17 Tax=Acinetobacter... 221 3e-56 UniRef50_Q391Q9 Transcriptional regulator, LysR family n=1 Tax=B... 221 3e-56 UniRef50_C6VMR5 Transcription regulator n=5 Tax=Lactobacillus Re... 221 3e-56 UniRef50_A4YPA1 Putative transcriptional regulator, LysR family ... 220 4e-56 UniRef50_A9AQZ4 Transcriptional regulator, LysR family n=24 Tax=... 220 4e-56 UniRef50_Q167Q4 Oxidative stress transcription regulator, oxyR, ... 220 4e-56 UniRef50_O33945 Probable cat1 operon transcriptional activator n... 220 4e-56 UniRef50_B1M8N3 Transcriptional regulator, LysR family n=35 Tax=... 220 4e-56 UniRef50_Q0SCY7 Transcriptional regulator, LysR family protein n... 220 4e-56 UniRef50_A6VSJ2 Transcriptional regulator, LysR family n=28 Tax=... 220 4e-56 UniRef50_Q47V10 Hydrogen peroxide-inducible genes activator n=1 ... 220 5e-56 UniRef50_D2ATF2 LysR family transcriptional regulator n=2 Tax=Ac... 220 5e-56 UniRef50_B4D9T5 Transcriptional regulator, LysR family n=1 Tax=C... 220 5e-56 UniRef50_Q7WC66 LysR-family transcriptional regulator n=3 Tax=Bo... 220 5e-56 UniRef50_Q1LGR3 Transcriptional regulator, LysR family n=3 Tax=B... 220 5e-56 UniRef50_B2JSK1 Transcriptional regulator, LysR family n=1 Tax=B... 220 5e-56 UniRef50_B8J293 Transcriptional regulator, LysR family n=1 Tax=D... 220 5e-56 UniRef50_A5F4D9 Transcriptional regulator, LysR family n=68 Tax=... 220 5e-56 UniRef50_A8LCN9 Transcriptional regulator, LysR family n=7 Tax=A... 220 5e-56 UniRef50_C9ABQ3 Transcriptional regulator n=1 Tax=Enterococcus c... 220 5e-56 UniRef50_C9YD50 RuBisCO operon transcriptional regulator n=1 Tax... 220 6e-56 UniRef50_C7NJ53 Transcriptional regulator n=1 Tax=Kytococcus sed... 220 6e-56 UniRef50_B9KUK0 Transcriptional regulator n=2 Tax=Rhodobacterace... 220 6e-56 UniRef50_Q2RQL6 Transcriptional regulator, LysR family n=2 Tax=R... 220 6e-56 UniRef50_A0LJJ0 Transcriptional regulator, LysR family n=2 Tax=B... 220 6e-56 UniRef50_Q1DBZ6 Transcriptional regulator, LysR family n=1 Tax=M... 220 7e-56 UniRef50_A4XPG0 Transcriptional regulator, LysR family n=1 Tax=P... 220 7e-56 UniRef50_D2QVQ4 Transcriptional regulator, LysR family n=22 Tax=... 220 7e-56 UniRef50_A6X7A0 Transcriptional regulator, LysR family n=1 Tax=O... 220 7e-56 UniRef50_A7IDL3 Transcriptional regulator, LysR family n=2 Tax=X... 220 7e-56 UniRef50_C6HY10 Transcriptional regulator, LysR family n=1 Tax=L... 220 8e-56 UniRef50_B9XK88 Transcriptional regulator, LysR family n=2 Tax=V... 220 8e-56 UniRef50_B9JQ31 Transcriptional regulator n=1 Tax=Agrobacterium ... 220 8e-56 UniRef50_Q2GAY9 Transcriptional regulator, LysR family n=1 Tax=N... 219 8e-56 UniRef50_D0Z9H4 Transcriptional regulator, LysR family n=40 Tax=... 219 8e-56 UniRef50_Q1GEX3 Transcriptional regulator, LysR family n=1 Tax=R... 219 9e-56 UniRef50_C6VMS1 Transcription regulator n=11 Tax=Firmicutes RepI... 219 9e-56 UniRef50_B2SBJ3 ALS operon regulatory protein n=36 Tax=Proteobac... 219 9e-56 UniRef50_C1XNG0 Transcriptional regulator, COG0583 n=2 Tax=Meiot... 219 1e-55 UniRef50_A4YQI9 Transcriptional regulator of protochatechuate de... 219 1e-55 UniRef50_P77744 HTH-type transcriptional regulator abgR n=48 Tax... 219 1e-55 UniRef50_C8WV81 Transcriptional regulator, LysR family n=2 Tax=A... 219 1e-55 UniRef50_C9KMN5 Transcriptional regulator, LysR family n=1 Tax=M... 219 1e-55 UniRef50_D1P3H6 Transcriptional regulator, LysR family n=1 Tax=P... 219 1e-55 UniRef50_C4DFU1 Transcriptional regulator, COG0583 n=1 Tax=Stack... 219 1e-55 UniRef50_Q13GE5 Transcriptional regulator, LysR family n=1 Tax=B... 219 1e-55 UniRef50_B6J4H7 Hydrogen peroxide-inducible gene activator n=7 T... 219 1e-55 UniRef50_Q0BPL7 Transcriptional regulators, LysR family n=1 Tax=... 219 1e-55 UniRef50_Q1LN85 Transcriptional regulator, LysR family n=1 Tax=C... 219 1e-55 UniRef50_Q0BQN6 Hydrogen peroxide-inducible genes activator n=2 ... 219 1e-55 UniRef50_B3EA60 Transcriptional regulator, LysR family n=2 Tax=B... 219 1e-55 UniRef50_C0ADM3 DNA-binding transcriptional regulator CynR n=2 T... 218 1e-55 UniRef50_Q20XL9 Transcriptional regulator, LysR family n=1 Tax=R... 218 1e-55 UniRef50_B9Z0M9 Transcriptional regulator, LysR family n=2 Tax=B... 218 1e-55 UniRef50_B2JTF3 Transcriptional regulator, LysR family n=1 Tax=B... 218 1e-55 UniRef50_C0CW97 Putative uncharacterized protein n=1 Tax=Clostri... 218 1e-55 UniRef50_Q72A86 Transcriptional regulator, LysR family n=3 Tax=D... 218 1e-55 UniRef50_D1PPF0 Transcriptional regulator, LysR family n=1 Tax=S... 218 1e-55 UniRef50_B5WW96 Transcriptional regulator, LysR family n=2 Tax=B... 218 1e-55 UniRef50_A5ZQM8 Putative uncharacterized protein n=1 Tax=Ruminoc... 218 2e-55 UniRef50_A9GLW1 Transcriptional regulator, LysR family n=1 Tax=S... 218 2e-55 UniRef50_Q5FRA7 Putative transcriptional regulator n=1 Tax=Gluco... 218 2e-55 UniRef50_A8V9B9 LysR-like regulatory protein n=2 Tax=Betaproteob... 218 2e-55 UniRef50_B5XSE9 Transcriptional regulator, LysR family n=6 Tax=E... 218 2e-55 UniRef50_B7VQ45 Transcriptional regulator n=8 Tax=Vibrionales Re... 218 2e-55 UniRef50_A6EW06 Transcriptional regulator n=2 Tax=Marinobacter R... 218 2e-55 UniRef50_Q39AY8 Transcriptional regulator, LysR family n=1 Tax=B... 218 2e-55 UniRef50_B9J8D6 Transcriptional regulator protein n=69 Tax=Prote... 218 2e-55 UniRef50_Q3JR86 LysR-family regultor n=70 Tax=Proteobacteria Rep... 218 2e-55 UniRef50_Q21B31 Transcriptional regulator, LysR family n=2 Tax=A... 218 2e-55 UniRef50_A1K6J7 LysR-family transcriptional regulator n=5 Tax=Pr... 218 3e-55 UniRef50_C1YJH3 Transcriptional regulator, COG0583 n=1 Tax=Nocar... 218 3e-55 UniRef50_B4ETA7 LysR-family transciptional regulator n=37 Tax=En... 218 3e-55 UniRef50_C8NRP5 Transcription regulator n=2 Tax=Corynebacterium ... 218 3e-55 UniRef50_Q08NF6 Transcriptional Regulator, LysR family n=1 Tax=S... 218 3e-55 UniRef50_D0YA85 Transcriptional regulator, LysR family n=5 Tax=K... 218 3e-55 UniRef50_C2FUK4 Transcriptional regulator n=2 Tax=Sphingobacteri... 218 3e-55 UniRef50_A4BHD6 Transcriptional regulator lysR family protein n=... 218 3e-55 UniRef50_B0TCS4 Transcriptional regulator, lysr family n=2 Tax=F... 218 3e-55 UniRef50_A8FAL6 LysR family transcriptional regulator n=10 Tax=B... 217 3e-55 UniRef50_C7QKA9 Transcriptional regulator, LysR family n=1 Tax=C... 217 3e-55 UniRef50_Q0VLU8 Transcriptional regulator, LysR family n=2 Tax=A... 217 3e-55 UniRef50_B0PCN4 Putative uncharacterized protein n=2 Tax=Bacteri... 217 3e-55 UniRef50_UPI000050F7F0 LysR family transcriptional regulator n=1... 217 3e-55 UniRef50_Q393U0 Transcriptional regulator, LysR family n=6 Tax=B... 217 3e-55 UniRef50_Q1LM47 Transcriptional regulator, LysR family n=1 Tax=C... 217 3e-55 UniRef50_C4ZMZ5 Transcriptional regulator, LysR family n=1 Tax=T... 217 3e-55 UniRef50_B7RZD5 LysR substrate binding domain protein n=1 Tax=ma... 217 4e-55 UniRef50_Q89IY7 Transcriptional regulatory protein n=1 Tax=Brady... 217 4e-55 UniRef50_A7IBY1 Transcriptional regulator, LysR family n=15 Tax=... 217 4e-55 UniRef50_A0LA88 Transcriptional regulator, LysR family n=1 Tax=M... 217 4e-55 UniRef50_Q13YH7 Transcriptional regulator, LysR family n=12 Tax=... 217 4e-55 UniRef50_B6JAE3 MexT protein n=1 Tax=Oligotropha carboxidovorans... 217 4e-55 UniRef50_D0I933 Putative transcriptional regulatory protein LysR... 217 4e-55 UniRef50_B7WRI3 Transcriptional regulator, LysR family n=1 Tax=C... 217 4e-55 UniRef50_C3JW42 Transcriptional regulator, LysR family n=4 Tax=R... 217 4e-55 UniRef50_Q5LKP3 Transcriptional regulator, LysR family n=1 Tax=R... 217 4e-55 UniRef50_A5V8P8 Transcriptional regulator, LysR family n=1 Tax=S... 217 4e-55 UniRef50_C8W2X0 Transcriptional regulator, LysR family n=1 Tax=D... 217 4e-55 UniRef50_A1SEX2 LysR, substrate-binding n=11 Tax=Actinomycetales... 217 4e-55 UniRef50_A4FAR0 Transcriptional regulator n=4 Tax=Actinomycetale... 217 5e-55 UniRef50_A3QJ07 Transcriptional regulator, LysR family n=25 Tax=... 217 5e-55 UniRef50_A1SFE6 Transcriptional regulator, LysR family n=3 Tax=A... 217 5e-55 UniRef50_Q2BMZ3 Putative transcriptional regulator, LysR family ... 217 5e-55 UniRef50_D0IZT6 Transcriptional regulator, LysR family n=5 Tax=C... 217 6e-55 UniRef50_A4JSC2 Transcriptional regulator, LysR family n=4 Tax=B... 217 6e-55 UniRef50_A5FXN6 Transcriptional regulator, LysR family n=6 Tax=A... 217 6e-55 UniRef50_C6HUD2 Transcriptional regulator, LysR family n=1 Tax=L... 217 6e-55 UniRef50_B7WQP0 Transcriptional regulator, LysR family n=1 Tax=C... 217 6e-55 UniRef50_UPI00004DBCAD UPI00004DBCAD related cluster n=2 Tax=Xen... 217 6e-55 UniRef50_C7RPQ0 Transcriptional regulator, LysR family n=1 Tax=C... 217 6e-55 UniRef50_Q73ZG9 Putative uncharacterized protein n=2 Tax=Mycobac... 216 7e-55 UniRef50_A9AT14 LysR family transcriptional regulator n=11 Tax=B... 216 7e-55 UniRef50_Q47P44 Putative LysR-family transcriptional regulator n... 216 7e-55 UniRef50_P10183 HTH-type transcriptional activator nahR n=67 Tax... 216 8e-55 UniRef50_A1UXD8 Transcriptional regulator, LysR family n=41 Tax=... 216 8e-55 UniRef50_A0KIB7 Transcriptional regulator, LysR family n=2 Tax=A... 216 8e-55 UniRef50_B2I357 Transcriptional regulator n=14 Tax=Moraxellaceae... 216 8e-55 UniRef50_B7RS92 Regulatory protein, LysR:LysR, substrate-binding... 216 8e-55 UniRef50_A8TZA8 Transcriptional regulator, LysR family protein n... 216 8e-55 UniRef50_Q46SX0 Transcriptional regulator, LysR family n=4 Tax=B... 216 8e-55 UniRef50_C3K9K8 Cyn operon positive regulator n=1 Tax=Pseudomona... 216 9e-55 UniRef50_Q2BJH5 LysR-family transcriptional regulator n=1 Tax=Ne... 216 9e-55 UniRef50_A3VVC0 Hydrogen peroxide-inducible genes activator prot... 216 9e-55 UniRef50_B1M8F7 Transcriptional regulator, LysR family n=4 Tax=R... 216 9e-55 UniRef50_D1ULQ3 Transcriptional regulator, LysR family n=1 Tax=B... 216 9e-55 UniRef50_C0CQV4 Putative uncharacterized protein n=1 Tax=Blautia... 216 9e-55 UniRef50_UPI0001A45942 HTH-type transcriptional regulator gltC n... 216 1e-54 UniRef50_Q3JWC0 LysR family regulatory protein n=26 Tax=Burkhold... 216 1e-54 UniRef50_B6B1G4 LysR family transcriptional regulatory protein n... 216 1e-54 UniRef50_B9JE08 Transcriptional regulator protein n=11 Tax=Rhizo... 216 1e-54 UniRef50_A0R7B5 LysR-family protein transcriptional regulator n=... 216 1e-54 UniRef50_B5EJJ4 Transcriptional regulator, LysR family n=3 Tax=A... 215 1e-54 UniRef50_A8FC55 LysR family transcriptional regulator n=2 Tax=Ba... 215 1e-54 UniRef50_B0NK79 Putative uncharacterized protein n=1 Tax=Clostri... 215 1e-54 UniRef50_A3EQ05 Putative transcriptional regulator, LysR family ... 215 1e-54 UniRef50_A5D1Z5 Transcriptional regulator n=1 Tax=Pelotomaculum ... 215 1e-54 UniRef50_B8GM38 LysR family transcriptional regulator n=4 Tax=Pr... 215 1e-54 UniRef50_C9PJ12 Putative transcriptional regulator protein n=1 T... 215 1e-54 UniRef50_Q15ZP2 Transcriptional regulator, LysR family n=2 Tax=A... 215 1e-54 UniRef50_Q0S6C8 Transcriptional regulator, LysR family protein n... 215 1e-54 UniRef50_B1ZCQ9 Transcriptional regulator, LysR family n=3 Tax=R... 215 2e-54 UniRef50_Q5WBL7 LysR family transcriptional regulator n=3 Tax=Ba... 215 2e-54 UniRef50_A1UYG7 Transcriptional regulator, LysR family n=45 Tax=... 215 2e-54 UniRef50_A0LD87 Transcriptional regulator, LysR family n=1 Tax=M... 215 2e-54 UniRef50_Q2G901 Transcriptional regulator, LysR family n=2 Tax=A... 215 2e-54 UniRef50_D2SB86 Transcriptional regulator, LysR family n=3 Tax=A... 215 2e-54 UniRef50_B3PFN1 Transcriptional regulator, LysR family n=1 Tax=C... 215 2e-54 UniRef50_A4FJ36 LysR-family transcriptional regulator n=2 Tax=Ac... 215 2e-54 UniRef50_A3IAK3 Transcriptional regulators, LysR family protein ... 215 2e-54 UniRef50_Q01RY1 Transcriptional regulator, LysR family n=1 Tax=C... 215 2e-54 UniRef50_D1ABG1 Transcriptional regulator, MarR family n=2 Tax=S... 215 2e-54 UniRef50_C2ANJ1 Transcriptional regulator, COG0583 n=1 Tax=Tsuka... 215 2e-54 UniRef50_Q5LR91 Transcriptional regulator, LysR family n=3 Tax=R... 215 2e-54 UniRef50_A4F849 LysR-family transcriptional regulator n=7 Tax=Ac... 215 2e-54 UniRef50_B5G8L5 Transcriptional regulator n=3 Tax=Actinomycetale... 215 2e-54 UniRef50_A4EJ78 Transcriptional Regulator, LysR family protein n... 215 2e-54 UniRef50_Q0JZR1 Transcriptional regulator, LysR-family n=8 Tax=P... 215 2e-54 UniRef50_A2SDX3 Transcriptional regulator, LysR family n=6 Tax=B... 215 2e-54 UniRef50_C5ALH3 Transcriptional regulator, LysR family protein n... 215 2e-54 UniRef50_A7HRT9 Transcriptional regulator, LysR family n=1 Tax=P... 215 2e-54 UniRef50_B8IW67 Transcriptional regulator, LysR family n=1 Tax=M... 215 2e-54 UniRef50_C6XSY8 LysR substrate-binding n=12 Tax=Bacteroidetes Re... 215 2e-54 UniRef50_Q1QYT3 Transcriptional regulator, LysR family n=1 Tax=C... 215 2e-54 UniRef50_A4EQ42 Transcriptional regulator, LysR family protein n... 215 2e-54 UniRef50_C8WE41 Transcriptional regulator, LysR family n=4 Tax=Z... 214 3e-54 UniRef50_Q0S956 Transcriptional regulator, LysR family protein n... 214 3e-54 UniRef50_UPI00017458E6 transcriptional regulator, LysR family pr... 214 3e-54 UniRef50_C7QF45 Transcriptional regulator, LysR family n=1 Tax=C... 214 3e-54 UniRef50_C0ZAD7 Transcriptional regulator n=1 Tax=Brevibacillus ... 214 3e-54 UniRef50_Q123J4 Transcriptional regulator, LysR family n=1 Tax=P... 214 3e-54 UniRef50_D1UNR7 Transcriptional regulator, LysR family n=1 Tax=B... 214 3e-54 UniRef50_C5S6X6 Transcriptional regulator, LysR family n=1 Tax=A... 214 3e-54 UniRef50_C4UEX0 Lys-R type regulatory protein n=1 Tax=Yersinia r... 214 3e-54 UniRef50_UPI0001B565BC LysR family transcriptional regulator n=1... 214 4e-54 UniRef50_Q0RL92 Putative uncharacterized protein n=1 Tax=Frankia... 214 4e-54 UniRef50_C4K9T0 Transcriptional regulator, LysR family n=1 Tax=T... 214 4e-54 UniRef50_A4Y0W1 Transcriptional regulator, LysR family n=13 Tax=... 214 4e-54 UniRef50_A6WFB8 Transcriptional regulator, LysR family n=1 Tax=K... 214 4e-54 UniRef50_D1TCI7 LysR family transcriptional regulator n=2 Tax=Bu... 214 4e-54 UniRef50_A6W0Q8 Transcriptional regulator, LysR family n=2 Tax=M... 214 4e-54 UniRef50_B8HGN1 Transcriptional regulator, LysR family n=4 Tax=M... 213 4e-54 UniRef50_A9C1Z6 Transcriptional regulator, LysR family n=1 Tax=D... 213 4e-54 UniRef50_C4DH98 Transcriptional regulator, COG0583 n=1 Tax=Stack... 213 4e-54 UniRef50_D0LKM3 Transcriptional regulator, LysR family n=1 Tax=H... 213 5e-54 UniRef50_B8J696 Transcriptional regulator, LysR family n=3 Tax=A... 213 5e-54 UniRef50_A6UBA0 Transcriptional regulator, LysR family n=7 Tax=c... 213 5e-54 UniRef50_A0KH33 Transcriptional regulator, LysR family n=2 Tax=A... 213 5e-54 UniRef50_Q8XRG7 Probable transcriptional regulator transcription... 213 5e-54 UniRef50_B5ZQW7 Transcriptional regulator, LysR family n=18 Tax=... 213 5e-54 UniRef50_A4XX96 Transcriptional regulator, LysR family n=3 Tax=P... 213 5e-54 UniRef50_Q12EW2 Transcriptional regulator, LysR family n=1 Tax=P... 213 5e-54 UniRef50_A6TWD6 Transcriptional regulator, LysR family n=1 Tax=A... 213 5e-54 UniRef50_C5CQD2 Transcriptional regulator, LysR family n=1 Tax=V... 213 5e-54 UniRef50_Q1GQE8 Transcriptional regulator, LysR family n=1 Tax=S... 213 5e-54 UniRef50_C8XBJ1 Transcriptional regulator, LysR family n=1 Tax=N... 213 5e-54 UniRef50_A3VL76 Putative LysR-family transcriptional regulator n... 213 5e-54 UniRef50_A4T9R9 Transcriptional regulator, LysR family n=8 Tax=C... 213 5e-54 UniRef50_Q7WJM8 Probable LysR-family transcriptional regulator n... 213 6e-54 UniRef50_A6V1Z2 Transcriptional regulator, LysR family n=13 Tax=... 213 6e-54 UniRef50_C1DSG7 Transcriptional regulator, LysR family n=1 Tax=A... 213 6e-54 UniRef50_A6VUW1 Transcriptional regulator, LysR family n=2 Tax=M... 213 6e-54 UniRef50_A5G0H6 Transcriptional regulator, LysR family n=1 Tax=A... 213 6e-54 UniRef50_A4XEX1 Transcriptional regulator, LysR family n=2 Tax=S... 213 6e-54 UniRef50_B4V0Q8 LysR-protein transcriptional regulator n=3 Tax=A... 213 6e-54 UniRef50_UPI00019F10A8 LysR family regulatory protein n=1 Tax=Ci... 213 6e-54 UniRef50_B7K2F2 Transcriptional regulator, LysR family n=8 Tax=C... 213 6e-54 UniRef50_A1W6X9 Transcriptional regulator, LysR family n=19 Tax=... 213 6e-54 UniRef50_Q13JN6 Transcriptional regulator, LysR family n=7 Tax=B... 213 6e-54 UniRef50_C7PZR8 Transcriptional regulator, LysR family n=1 Tax=C... 213 6e-54 UniRef50_B4WIK9 LysR substrate binding domain protein n=1 Tax=Sy... 213 6e-54 UniRef50_B1ZJS2 Transcriptional regulator, LysR family n=8 Tax=A... 213 7e-54 UniRef50_Q1AVK2 Transcriptional regulator, LysR family n=1 Tax=R... 213 7e-54 UniRef50_A1W2J2 Transcriptional regulator, LysR family n=25 Tax=... 213 7e-54 UniRef50_Q4K3G6 Transcriptional regulator, LysR family n=12 Tax=... 213 7e-54 UniRef50_B1ZVT1 Transcriptional regulator, LysR family n=3 Tax=V... 213 7e-54 UniRef50_C7RKX8 Transcriptional regulator, LysR family n=20 Tax=... 213 7e-54 UniRef50_A1TIM2 Transcriptional regulator, LysR family n=2 Tax=A... 213 8e-54 UniRef50_B9QX96 LysR substrate binding domain protein n=1 Tax=La... 213 8e-54 UniRef50_D1UHR2 Transcriptional regulator, LysR family n=1 Tax=B... 213 8e-54 UniRef50_Q1IQA4 Transcriptional regulator, LysR family n=1 Tax=C... 213 9e-54 UniRef50_Q2LS85 Transcriptional regulator, LysR family n=1 Tax=S... 213 9e-54 UniRef50_Q1N663 Regulatory protein, LysR:LysR, substrate-binding... 213 1e-53 UniRef50_B5EHW2 Transcriptional regulator, LysR family n=5 Tax=D... 212 1e-53 UniRef50_A6NX65 Putative uncharacterized protein n=1 Tax=Bactero... 212 1e-53 UniRef50_A9BWC5 Transcriptional regulator, LysR family n=6 Tax=P... 212 1e-53 UniRef50_B9YDM1 Putative uncharacterized protein n=1 Tax=Holdema... 212 1e-53 UniRef50_Q0B7J0 Transcriptional regulator, LysR family n=1 Tax=B... 212 1e-53 UniRef50_D2B2W6 Transcriptional regulator, LysR family n=17 Tax=... 212 1e-53 UniRef50_UPI0001B4FA16 LysR family transcriptional regulator n=1... 212 1e-53 UniRef50_Q1QUX6 Transcriptional regulator, LysR family n=1 Tax=C... 212 1e-53 UniRef50_Q4KEU3 Transcriptional regulator, LysR family n=8 Tax=P... 212 1e-53 UniRef50_B1FZF1 Transcriptional regulator, LysR family n=1 Tax=B... 212 1e-53 UniRef50_D2B6U1 DNA-binding transcriptional regulator CynR n=1 T... 212 1e-53 UniRef50_UPI0001B4E379 LysR family transcriptional regulator n=1... 212 1e-53 UniRef50_A3Y808 Transcriptional regulator, LysR family protien n... 212 1e-53 UniRef50_B1Y0L4 Transcriptional regulator, LysR family n=2 Tax=B... 212 1e-53 UniRef50_B2T7R4 Transcriptional regulator, LysR family n=5 Tax=B... 212 1e-53 UniRef50_Q2IYM8 Transcriptional regulator, LysR family n=2 Tax=R... 212 1e-53 UniRef50_B8KV86 Putative transcriptional regulator, LysR family ... 212 1e-53 UniRef50_Q01QD7 Transcriptional regulator, LysR family n=1 Tax=C... 212 2e-53 UniRef50_Q8TVB0 Transcriptional regulator of the LysR family n=1... 212 2e-53 UniRef50_A1BA87 Transcriptional regulator, LysR family n=1 Tax=P... 212 2e-53 UniRef50_Q13GF1 Transcriptional regulator, LysR family n=1 Tax=B... 212 2e-53 UniRef50_Q7D0H0 Transcriptional regulator, LysR family n=12 Tax=... 212 2e-53 UniRef50_C7JHS5 Transcriptional regulator LysR n=7 Tax=Acetobact... 211 2e-53 UniRef50_A8LT79 Transcriptional regulator n=1 Tax=Dinoroseobacte... 211 2e-53 UniRef50_B9JKI4 Hydrogen peroxide sensing transcriptional regula... 211 2e-53 UniRef50_D1YDW7 LysR substrate binding domain protein n=3 Tax=Pr... 211 2e-53 UniRef50_C0Z529 Transcriptional regulator n=1 Tax=Brevibacillus ... 211 2e-53 UniRef50_A9AUC8 Transcriptional regulator, LysR family n=2 Tax=C... 211 2e-53 UniRef50_A7IQF8 Transcriptional regulator, LysR family n=12 Tax=... 211 2e-53 UniRef50_A3NGA2 Transcriptional regulator n=70 Tax=Proteobacteri... 211 2e-53 UniRef50_B1M0B1 Transcriptional regulator, LysR family n=24 Tax=... 211 2e-53 UniRef50_C6DI39 Transcriptional regulator, LysR family n=1 Tax=P... 211 2e-53 UniRef50_C5CMN8 Transcriptional regulator, LysR family n=1 Tax=V... 211 2e-53 UniRef50_Q0K3Z3 Transcriptional regulator, LysR-family n=1 Tax=R... 211 2e-53 UniRef50_Q2BJ61 Transcriptional regulator, LysR family protein n... 211 2e-53 UniRef50_B5JHH8 LysR substrate binding domain protein n=1 Tax=Ve... 211 2e-53 UniRef50_Q67TA2 LysR family transcriptional regulator n=1 Tax=Sy... 211 2e-53 UniRef50_D2MBA7 Transcriptional regulator, LysR family n=1 Tax=R... 211 2e-53 UniRef50_C6DDI5 Transcriptional regulator, LysR family n=4 Tax=E... 211 2e-53 UniRef50_C4ZIH4 Transcriptional regulator, LysR family n=1 Tax=T... 211 2e-53 UniRef50_B5I0V5 LysR-family transcriptional regulator n=10 Tax=A... 211 2e-53 UniRef50_Q4ZWE4 Regulatory protein, LysR:LysR, substrate-binding... 211 2e-53 UniRef50_Q5R0U0 Transcriptional regulator, LysR family n=1 Tax=I... 211 2e-53 UniRef50_A4SSQ1 Transcriptional regulator, LysR family n=2 Tax=A... 211 2e-53 UniRef50_C4I668 Transcriptional regulator, LysR family n=80 Tax=... 211 2e-53 UniRef50_A6SXB4 Transcriptional regulator, LysR family n=1 Tax=J... 211 2e-53 UniRef50_D0KZQ9 Transcriptional regulator, LysR family n=3 Tax=P... 211 3e-53 UniRef50_B3EBY3 Transcriptional regulator, LysR family n=3 Tax=P... 211 3e-53 UniRef50_A6T102 Transcriptional regulator, LysR family n=1 Tax=J... 211 3e-53 UniRef50_C4WNV4 Probable cat1 operon transcriptional activator n... 211 3e-53 UniRef50_B9QYV9 LysR substrate binding domain protein n=1 Tax=La... 211 3e-53 UniRef50_UPI000178953B transcriptional regulator, LysR family n=... 211 3e-53 UniRef50_Q7WMW6 Putative LysR-family transcriptional regulator n... 211 3e-53 UniRef50_C6XNZ9 Transcriptional regulator, LysR family n=1 Tax=H... 211 3e-53 UniRef50_A1U8Q8 Transcriptional regulator, LysR family n=1 Tax=M... 211 3e-53 UniRef50_Q4K4U2 Transcriptional regulator, LysR family n=17 Tax=... 211 3e-53 UniRef50_C9XXC7 HTH-type transcriptional regulator budR n=7 Tax=... 211 3e-53 UniRef50_Q9FD34 PnbR n=2 Tax=Pseudomonas RepID=Q9FD34_PSEPU 211 3e-53 UniRef50_D1BTU3 Transcriptional regulator, LysR family n=1 Tax=X... 211 3e-53 UniRef50_B2JFW9 Transcriptional regulator, LysR family n=39 Tax=... 211 3e-53 UniRef50_C0D3N8 Putative uncharacterized protein n=2 Tax=Clostri... 211 3e-53 UniRef50_Q1XGL2 Transcriptional activator NahR n=3 Tax=root RepI... 211 3e-53 UniRef50_Q46P28 Transcriptional regulator, LysR family n=1 Tax=R... 211 3e-53 UniRef50_B3PDU8 Transcriptional regulator, LysR family n=1 Tax=C... 211 3e-53 UniRef50_D0J3K7 Transcriptional regulator, LysR family n=3 Tax=C... 211 3e-53 UniRef50_C5B901 Transcriptional activator, LysR family n=74 Tax=... 211 3e-53 UniRef50_B9Z5T7 Transcriptional regulator, LysR family n=1 Tax=L... 211 3e-53 UniRef50_B0C4T0 Transcriptional regulator, LysR family n=1 Tax=A... 211 3e-53 UniRef50_A9GGP1 LysR-family transcriptional regulator n=1 Tax=So... 211 3e-53 UniRef50_A7IIH2 Transcriptional regulator, LysR family n=1 Tax=X... 211 4e-53 UniRef50_P52661 HTH-type transcriptional regulator gbpR n=1 Tax=... 210 4e-53 UniRef50_B7RV59 LysR substrate binding domain protein n=1 Tax=ma... 210 4e-53 UniRef50_Q1D8H0 Transcriptional regulator, LysR family n=2 Tax=C... 210 4e-53 UniRef50_B7VQV6 Transcriptional regulator n=10 Tax=Vibrionales R... 210 4e-53 UniRef50_Q6FDZ3 Putative transcriptional regulator n=1 Tax=Acine... 210 4e-53 UniRef50_C3JX55 HTH-type transcriptional regulator CynR n=2 Tax=... 210 4e-53 UniRef50_UPI0001693B14 transcriptional regulator, LysR family pr... 210 4e-53 UniRef50_Q1LFI3 Transcriptional regulator, LysR family n=1 Tax=C... 210 5e-53 UniRef50_B5XR29 Transcriptional regulator, LysR family n=2 Tax=K... 210 5e-53 UniRef50_A8II36 Putative transcriptional regulator n=1 Tax=Azorh... 210 5e-53 UniRef50_A3VWI6 Transcriptional regulatory protein n=1 Tax=Roseo... 210 5e-53 UniRef50_B8IWD6 Transcriptional regulator, LysR family n=1 Tax=M... 210 5e-53 UniRef50_A9ANF4 LysR family transcriptional regulator n=8 Tax=Pr... 210 5e-53 UniRef50_C6XPR6 Transcriptional regulator, LysR family n=1 Tax=H... 210 6e-53 UniRef50_P52670 HTH-type transcriptional regulator ilvR n=98 Tax... 210 6e-53 UniRef50_B7CP85 Transcriptional regulator, LysR family protein n... 210 7e-53 UniRef50_B0TM59 Transcriptional regulator, LysR family n=2 Tax=S... 210 7e-53 UniRef50_Q13AV2 LysR, substrate-binding n=2 Tax=Alphaproteobacte... 210 7e-53 UniRef50_Q07RX2 Transcriptional regulator, LysR family n=14 Tax=... 210 7e-53 UniRef50_A9IN12 Transcriptional regulator, LysR-family n=1 Tax=B... 210 7e-53 UniRef50_A0JW61 Transcriptional regulator, LysR family n=1 Tax=A... 210 7e-53 UniRef50_D2PY57 Transcriptional regulator, LysR family n=3 Tax=A... 210 8e-53 UniRef50_A2SKW7 Transcriptional regulator, LysR family n=24 Tax=... 210 8e-53 UniRef50_Q7WGP5 LysR-family transcriptional regulator n=2 Tax=Bo... 210 8e-53 UniRef50_C7RRH9 Transcriptional regulator, LysR family n=1 Tax=C... 210 8e-53 UniRef50_Q2T257 Transcriptional regulator, LysR family n=16 Tax=... 210 8e-53 UniRef50_Q5NRI0 Transcriptional regulator, LysR family n=1 Tax=Z... 209 8e-53 UniRef50_Q13R07 Transcriptional regulator, LysR family n=1 Tax=B... 209 9e-53 UniRef50_C6QC52 Transcriptional regulator, LysR family n=1 Tax=H... 209 9e-53 UniRef50_B2T4S2 Transcriptional regulator, LysR family n=18 Tax=... 209 1e-52 UniRef50_P52595 HTH-type transcriptional regulator cbbR n=2 Tax=... 209 1e-52 UniRef50_C5AIL5 Transcriptional regulator, LysR family protein n... 209 1e-52 UniRef50_UPI0001B57BFC transcriptional regulator n=1 Tax=Strepto... 209 1e-52 UniRef50_A8GZD3 Transcriptional regulator, LysR family n=22 Tax=... 209 1e-52 UniRef50_C9YDU9 HTH-type transcriptional activator cmpR n=1 Tax=... 209 1e-52 UniRef50_A5VCH0 Transcriptional regulator, LysR family n=1 Tax=S... 209 1e-52 UniRef50_C4STU7 Transcriptional regulator n=2 Tax=Enterobacteria... 209 1e-52 UniRef50_A9ILQ9 Transcriptional regulator, LysR-family n=22 Tax=... 209 1e-52 UniRef50_A1K5Q5 Transcriptional regulator, LysR family n=4 Tax=B... 209 1e-52 UniRef50_Q2JIR1 Transcriptional regulator, LysR family n=2 Tax=S... 209 1e-52 UniRef50_A9F0H5 Transcriptional regulator, LysR family n=1 Tax=S... 209 1e-52 UniRef50_Q1QXA1 Transcriptional regulator, LysR family n=1 Tax=C... 209 1e-52 UniRef50_A4A3P1 Transcriptional regulator, LysR family protein n... 209 1e-52 UniRef50_B8DKE3 Transcriptional regulator, LysR family n=1 Tax=D... 209 1e-52 UniRef50_B1KCH9 Transcriptional regulator, LysR family n=2 Tax=B... 209 1e-52 UniRef50_B0PHZ7 Putative uncharacterized protein n=1 Tax=Anaerot... 208 1e-52 UniRef50_C0ZNV8 Putative LysR family transcriptional regulator n... 208 1e-52 UniRef50_A9AQX4 Transcriptional regulator, LysR family n=20 Tax=... 208 2e-52 UniRef50_UPI0001C30F5F transcriptional regulator, LysR family n=... 208 2e-52 UniRef50_Q28KZ9 Transcriptional regulator, LysR family n=8 Tax=P... 208 2e-52 UniRef50_C7N070 Transcriptional regulator n=1 Tax=Saccharomonosp... 208 2e-52 UniRef50_C9KN75 Transcriptional regulator, LysR family n=1 Tax=M... 208 2e-52 UniRef50_C0D9J1 Putative uncharacterized protein n=1 Tax=Clostri... 208 2e-52 UniRef50_Q4ZT12 Regulatory protein, LysR:LysR, substrate-binding... 208 2e-52 UniRef50_C5AL93 Transcriptional regulator, LysR family protein n... 208 2e-52 UniRef50_C4DN91 Transcriptional regulator, COG0583 n=2 Tax=Actin... 208 2e-52 UniRef50_A4SH82 Transcriptional regulator, LysR family n=2 Tax=A... 208 2e-52 UniRef50_Q2SKI3 Transcriptional regulator n=3 Tax=Oceanospirilla... 208 2e-52 UniRef50_UPI0000383CFA COG0583: Transcriptional regulator n=1 Ta... 208 2e-52 UniRef50_A8L1J4 Transcriptional regulator, LysR family n=2 Tax=B... 208 2e-52 UniRef50_Q1LGF7 Transcriptional regulator, LysR family n=5 Tax=B... 208 2e-52 UniRef50_B5XYZ1 Transcriptional regulator, LysR family n=5 Tax=K... 208 2e-52 UniRef50_A1WN33 Transcriptional regulator, LysR family n=1 Tax=V... 208 2e-52 UniRef50_Q7NSX8 Probable transcriptional regulator, LysR family ... 208 2e-52 UniRef50_Q0KB06 Transcriptional regulator, LysR-family n=8 Tax=P... 208 2e-52 UniRef50_Q15TE0 Transcriptional regulator, LysR family n=4 Tax=A... 208 2e-52 UniRef50_D2LJB2 Transcriptional regulator, LysR family n=1 Tax=R... 208 2e-52 UniRef50_B2IHZ5 Transcriptional regulator, LysR family n=2 Tax=B... 208 2e-52 UniRef50_Q2CCM2 Transcriptional regulator, LysR family protein n... 208 2e-52 UniRef50_Q0RY04 Transcriptional regulator, LysR family protein n... 208 2e-52 UniRef50_Q0BYJ0 Transcriptional regulator, LysR family n=1 Tax=H... 208 2e-52 UniRef50_Q01QC4 Transcriptional regulator, LysR family n=1 Tax=C... 208 2e-52 UniRef50_B0T555 Transcriptional regulator, LysR family n=8 Tax=A... 208 2e-52 UniRef50_Q2RXK6 Transcriptional regulator, LysR family n=2 Tax=A... 208 2e-52 UniRef50_A3K4Q2 Probable LysR-family transcriptional regulator n... 208 2e-52 UniRef50_B7RV99 Transcriptional regulator, LysR family protein n... 208 2e-52 UniRef50_Q7MFJ9 Transcriptional regulator n=28 Tax=Vibrio RepID=... 208 2e-52 UniRef50_B1ZUZ0 Transcriptional regulator, LysR family n=2 Tax=O... 208 3e-52 UniRef50_A9ILM0 Transcriptional regulator, LysR-family n=1 Tax=B... 208 3e-52 UniRef50_C5CZG1 Transcriptional regulator, LysR family n=1 Tax=V... 208 3e-52 UniRef50_Q7NE88 LysR family transcriptional regulatory protein n... 208 3e-52 UniRef50_C7QGK1 Transcriptional regulator, LysR family n=1 Tax=C... 208 3e-52 UniRef50_Q210Z5 Transcriptional regulator, LysR family n=2 Tax=A... 208 3e-52 UniRef50_C9KL67 Transcriptional regulator, LysR family n=2 Tax=V... 208 3e-52 UniRef50_Q15VE5 Transcriptional regulator, LysR family n=1 Tax=P... 208 3e-52 UniRef50_Q7NT25 Probable transcription regulator protein n=1 Tax... 208 3e-52 UniRef50_C4XLK5 LysR family transcriptional regulator n=2 Tax=De... 208 3e-52 UniRef50_Q4KFG8 Transcriptional regulator, LysR family n=2 Tax=P... 207 3e-52 UniRef50_A6FYP7 Transcriptional regulator, LysR family protein n... 207 3e-52 UniRef50_D2AWV2 LysR family transcriptional regulator n=3 Tax=Ac... 207 3e-52 UniRef50_A1VMI6 Transcriptional regulator, LysR family n=28 Tax=... 207 3e-52 UniRef50_C1F703 Transcriptional regulator, LysR family n=1 Tax=A... 207 4e-52 UniRef50_A1UYR8 Transcriptional regulator, LysR family n=32 Tax=... 207 4e-52 UniRef50_A9BXG3 Transcriptional regulator, LysR family n=218 Tax... 207 4e-52 UniRef50_Q5LN55 Transcriptional regulator, LysR family n=4 Tax=R... 207 4e-52 UniRef50_Q7WNN7 Probable LysR-family transcriptional regulator n... 207 4e-52 UniRef50_P23841 HTH-type transcriptional regulator xapR n=60 Tax... 207 4e-52 UniRef50_Q160L3 Transcriptional regulator, LysR family, putative... 207 4e-52 UniRef50_C6B5D0 Transcriptional regulator, LysR family n=1 Tax=R... 207 4e-52 UniRef50_C9CTJ4 LysR substrate binding domain protein n=1 Tax=Si... 207 4e-52 UniRef50_C3JI38 Transcriptional regulator, LysR family n=4 Tax=R... 207 4e-52 UniRef50_C8X447 Transcriptional regulator, LysR family n=1 Tax=D... 207 4e-52 UniRef50_D1BHN9 Transcriptional regulator n=2 Tax=Micrococcineae... 207 5e-52 UniRef50_B7V4S2 Probable transcriptional regulator n=7 Tax=Pseud... 207 5e-52 UniRef50_A4F8I8 LysR-family transcriptional regulator n=2 Tax=Ps... 207 5e-52 UniRef50_A9IDE3 LysR-family transcriptional regulator n=1 Tax=Bo... 207 5e-52 UniRef50_Q46N28 Transcriptional regulator, LysR family n=4 Tax=B... 207 5e-52 UniRef50_B4EAA1 LysR family regulatory protein n=5 Tax=Burkholde... 207 5e-52 UniRef50_C9KKN0 Transcriptional regulatory protein, LYSR family ... 207 5e-52 UniRef50_A3KIZ0 Putative LysR-family transcriptional regulatory ... 207 5e-52 UniRef50_B8H865 Transcriptional regulator, LysR family n=1 Tax=A... 206 6e-52 UniRef50_C8PZE4 Ben operon transcriptional regulator BenM n=1 Ta... 206 6e-52 UniRef50_C2AM94 Transcriptional regulator, COG0583 n=1 Tax=Tsuka... 206 6e-52 UniRef50_B3E2N5 Transcriptional regulator, LysR family n=1 Tax=G... 206 6e-52 UniRef50_Q2JPG1 Transcriptional regulator, LysR family n=2 Tax=S... 206 6e-52 UniRef50_B1LW43 Transcriptional regulator, LysR family n=1 Tax=M... 206 6e-52 UniRef50_B9Z7Z3 Transcriptional regulator, LysR family n=3 Tax=P... 206 6e-52 UniRef50_A0B0U5 Transcriptional regulator, LysR family n=18 Tax=... 206 6e-52 UniRef50_B5I3M3 Transcriptional regulator n=1 Tax=Streptomyces s... 206 6e-52 UniRef50_C3PKA0 Transcriptional regulator, LysR family n=1 Tax=C... 206 6e-52 UniRef50_Q20XM0 Transcriptional regulator, LysR family n=1 Tax=R... 206 6e-52 UniRef50_A0JQW9 Transcriptional regulator, LysR family n=2 Tax=A... 206 6e-52 UniRef50_A0KG94 Transcriptional regulator, LysR family n=5 Tax=G... 206 7e-52 UniRef50_D2BW38 Transcriptional regulator, LysR family n=19 Tax=... 206 7e-52 UniRef50_C5CPN7 Transcriptional regulator, LysR family n=1 Tax=V... 206 7e-52 UniRef50_B7V886 Probable transcriptional regulator n=7 Tax=Pseud... 206 7e-52 UniRef50_A0AXF9 Transcriptional regulator, LysR family n=9 Tax=B... 206 7e-52 UniRef50_A9FZI9 Transcriptional regulator, LysR family n=6 Tax=B... 206 7e-52 UniRef50_A3X6E2 Transcriptional regulatory protein n=1 Tax=Roseo... 206 7e-52 UniRef50_Q8YZV2 Transcriptional regulator n=2 Tax=Nostocaceae Re... 206 7e-52 UniRef50_B1MAP8 Putative transcription regulator, LysR family n=... 206 7e-52 UniRef50_A6UB72 Transcriptional regulator, LysR family n=1 Tax=S... 206 7e-52 UniRef50_A7ZNW2 Transcriptional regulator, LysR family n=40 Tax=... 206 8e-52 UniRef50_Q390Q2 Transcriptional regulator, LysR family n=6 Tax=B... 206 8e-52 UniRef50_A4SYM5 Transcriptional regulator n=1 Tax=Polynucleobact... 206 8e-52 UniRef50_Q7MCZ8 Transcriptional regulator n=13 Tax=Vibrionaceae ... 206 8e-52 UniRef50_B0TI97 Transcriptional regulator, lysr family n=2 Tax=C... 206 8e-52 UniRef50_A7HFD0 Transcriptional regulator, LysR family n=1 Tax=A... 206 8e-52 UniRef50_C1B6M2 Putative LysR family transcriptional regulator n... 206 9e-52 UniRef50_Q39MH6 Transcriptional regulator, LysR family n=3 Tax=B... 206 9e-52 UniRef50_B1J4U2 Transcriptional regulator, LysR family n=2 Tax=P... 206 9e-52 UniRef50_A0PUR0 Transcriptional regulatory protein (LysR family)... 206 9e-52 UniRef50_A5WE98 Transcriptional regulator, LysR family n=2 Tax=P... 206 9e-52 UniRef50_A3U1I2 Regulatory protein, LysR:LysR, substrate-binding... 206 1e-51 UniRef50_Q01Z84 Transcriptional regulator, LysR family n=1 Tax=C... 206 1e-51 UniRef50_A6E621 Transcriptional regulator, LysR family protein n... 206 1e-51 UniRef50_Q5SM20 Transcriptional regulator, LysR family n=4 Tax=T... 206 1e-51 UniRef50_Q03CT2 Fhu operon transcription regulator n=4 Tax=Lacto... 206 1e-51 UniRef50_B0CAU2 Transcriptional regulator, LysR family n=1 Tax=A... 206 1e-51 UniRef50_B6JJW7 Transcriptional regulator, LysR family n=25 Tax=... 206 1e-51 UniRef50_Q88I06 Nodulation protein d1 n=4 Tax=Gammaproteobacteri... 206 1e-51 UniRef50_C8X6Z0 Transcriptional regulator, LysR family n=1 Tax=N... 206 1e-51 UniRef50_A4FC54 Positive Regulator of yybF (LysR family) n=2 Tax... 206 1e-51 UniRef50_Q1J2L5 Transcriptional regulator, LysR family n=2 Tax=D... 206 1e-51 UniRef50_P03030 Transcriptional activator protein lysR n=101 Tax... 206 1e-51 UniRef50_Q46U73 Regulatory protein, LysR:LysR, substrate-binding... 205 1e-51 UniRef50_B9KWM6 LysR family transcriptional regulatory protein n... 205 1e-51 UniRef50_C9XVD4 Nitrogen assimilation regulatory protein nac n=1... 205 1e-51 UniRef50_A5G2J6 Transcriptional regulator, LysR family n=1 Tax=A... 205 1e-51 UniRef50_A9H8E1 Putative transcriptional Regulator, LysR family ... 205 1e-51 UniRef50_A8GI04 Transcriptional regulator, LysR family n=2 Tax=S... 205 1e-51 UniRef50_Q46S80 Transcriptional regulator, LysR family n=4 Tax=C... 205 2e-51 UniRef50_UPI0001B4C1F4 LysR family transcriptional regulator n=1... 205 2e-51 UniRef50_C5CZY6 Transcriptional regulator, LysR family n=1 Tax=V... 205 2e-51 UniRef50_UPI0001745C10 putative transcriptional regulator,lysR f... 205 2e-51 UniRef50_A8HSB3 Regulatory protein n=1 Tax=Azorhizobium caulinod... 205 2e-51 UniRef50_B5JUQ0 Transcriptional regulator, LysR family, putative... 205 2e-51 UniRef50_Q2W289 Transcriptional regulator n=2 Tax=Magnetospirill... 205 2e-51 UniRef50_Q478C5 Transcriptional regulator, LysR family n=2 Tax=B... 205 2e-51 UniRef50_C1D4D4 Transcriptional regulator, LysR family n=1 Tax=L... 205 2e-51 UniRef50_D1PWM9 HTH_1 family transcriptional regulator n=4 Tax=P... 205 2e-51 UniRef50_Q213Z8 Transcriptional regulator, LysR family n=2 Tax=R... 205 2e-51 UniRef50_B4ELV6 LysR family regulatory protein n=1 Tax=Burkholde... 205 2e-51 UniRef50_Q5FRB3 Oxidative stress regulatory protein OxyR n=2 Tax... 205 2e-51 UniRef50_Q13GK2 Transcriptional regulator, LysR family n=1 Tax=B... 205 2e-51 UniRef50_Q4KHX1 Transcriptional regulator, LysR family n=1 Tax=P... 205 2e-51 UniRef50_A0QQC7 Transcriptional regulator, LysR family protein n... 205 2e-51 UniRef50_Q47Q09 Putative LysR-family transcriptional regulator n... 205 2e-51 UniRef50_A4AGD2 Putative LysR-family transcriptional regulator n... 205 2e-51 UniRef50_C4KR89 Transcriptional regulator, LysR family n=67 Tax=... 205 2e-51 UniRef50_A5V773 Transcriptional regulator, LysR family n=2 Tax=A... 205 2e-51 UniRef50_C5D1A4 Transcriptional regulator, LysR family n=1 Tax=V... 205 2e-51 UniRef50_UPI0001B5701E putative LysR family transcriptional regu... 205 2e-51 UniRef50_Q12BL7 Transcriptional regulator, LysR family n=1 Tax=P... 205 2e-51 UniRef50_Q0FTS9 Transcriptional regulatory protein n=1 Tax=Roseo... 205 2e-51 UniRef50_B4BMT1 Transcriptional regulator, LysR family n=2 Tax=G... 205 2e-51 Sequences not found previously or not previously below threshold: UniRef50_C9RY94 Transcriptional regulator, LysR family n=8 Tax=B... 232 2e-59 UniRef50_A3I7R5 Transcriptional regulators, LysR family protein ... 227 6e-58 UniRef50_C6P9X7 Transcriptional regulator, LysR family n=1 Tax=T... 225 2e-57 UniRef50_B0N9C4 Putative uncharacterized protein n=1 Tax=Clostri... 225 2e-57 UniRef50_Q31JM2 Transcriptional regulator, LysR family n=1 Tax=T... 225 2e-57 UniRef50_Q0AZ61 Transcriptional regulator, LysR family n=1 Tax=S... 224 4e-57 UniRef50_B0MDT7 Putative uncharacterized protein n=1 Tax=Anaeros... 223 5e-57 UniRef50_B8D275 Transcriptional regulator, LysR family n=11 Tax=... 222 1e-56 UniRef50_Q0TQC8 Transcriptional regulator, LysR family n=10 Tax=... 222 1e-56 UniRef50_B1KU62 Transcriptional regulator, LysR family n=10 Tax=... 221 2e-56 UniRef50_Q3AEF0 Transcriptional regulator, LysR family n=1 Tax=C... 221 3e-56 UniRef50_B8G0Z2 Transcriptional regulator, LysR family n=4 Tax=F... 221 4e-56 UniRef50_B8G0R2 Transcriptional regulator, LysR family n=3 Tax=C... 220 5e-56 UniRef50_Q31IK2 Transcriptional regulator, LysR family n=2 Tax=P... 220 5e-56 UniRef50_B2HXW5 Transcriptional regulator n=12 Tax=Proteobacteri... 220 5e-56 UniRef50_Q1G7P1 Transcriptional regulator (LysR family) n=3 Tax=... 219 1e-55 UniRef50_A9KT60 Transcriptional regulator, LysR family n=1 Tax=C... 218 2e-55 UniRef50_Q6ANM2 Related to transcriptional regulator n=3 Tax=Des... 217 4e-55 UniRef50_C8W3M6 Transcriptional regulator, LysR family n=1 Tax=D... 217 4e-55 UniRef50_B8FZV1 Transcriptional regulator, LysR family n=2 Tax=D... 217 6e-55 UniRef50_A8S8P4 Putative uncharacterized protein n=2 Tax=Ruminoc... 217 7e-55 UniRef50_C7GB30 Transcriptional regulator n=1 Tax=Roseburia inte... 215 1e-54 UniRef50_A1ZLC1 Transcriptional Regulator, LysR family n=1 Tax=M... 214 3e-54 UniRef50_C0WBX8 Transcriptional regulator n=3 Tax=Firmicutes Rep... 213 6e-54 UniRef50_P94501 HTH-type transcriptional regulator gltR n=3 Tax=... 213 8e-54 UniRef50_B9ITM1 Transcriptional regulator, LysR family n=71 Tax=... 212 1e-53 UniRef50_C9LQU8 Transcriptional regulator, LysR family n=2 Tax=C... 212 1e-53 UniRef50_A8PL83 Hydrogen peroxide-inducible genes activator (Mor... 211 2e-53 UniRef50_A4BDL0 Transcriptional regulator n=2 Tax=Gammaproteobac... 209 1e-52 UniRef50_C6D8F3 Transcriptional regulator, LysR family n=1 Tax=P... 209 1e-52 UniRef50_B9NTV8 Transcriptional regulator, LysR family n=1 Tax=R... 208 1e-52 UniRef50_Q1DCG4 Transcriptional regulator, LysR family n=2 Tax=C... 208 2e-52 UniRef50_C0CW60 Putative uncharacterized protein n=1 Tax=Clostri... 208 2e-52 UniRef50_UPI0001788193 transcriptional regulator, LysR family n=... 208 3e-52 UniRef50_C0GDQ1 Transcriptional regulator, LysR family n=1 Tax=D... 205 1e-51 UniRef50_A6GLG8 Transcriptional regulator, LysR family protein n... 205 2e-51 >UniRef50_A9VF88 Transcriptional regulator, LysR family n=77 Tax=Bacillales RepID=A9VF88_BACWK Length = 305 Score = 278 bits (713), Expect = 2e-73, Method: Composition-based stats. Identities = 39/315 (12%), Positives = 100/315 (31%), Gaps = 22/315 (6%) Query: 7 TLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTP 66 +++L L + +E T+AA+++N++ ++S+ + L PLF +S T Sbjct: 8 SIELRQLEYFLAVSKELHFTRAAEKLNISQPSLSQQIRALEHEVGMPLFDRIGKKISLTE 67 Query: 67 LMVSMEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQIYQRYPQ 125 + + + + ++ +L ++YP Sbjct: 68 AGRVLLSHSKTIFHEVEQARSAIQDLNGLHHGSLTIGSLLTVVNYLLPPAILDFNKQYPN 127 Query: 126 ATIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 + + + + + + E+DIG + I L+ + + Sbjct: 128 IELSVLGLRTGEIREKLLQNELDIGITFLPVQ----------DKEIVSIPLYKSELTLVV 177 Query: 185 RKDHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 H + +++ YP I + T + + Q + + + E + Sbjct: 178 PTSHSLTERKYVSIEELQDYPLILLPKNFYLTELITSHCQNFNFKPKPILEISTMESLIQ 237 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 M AQ + + P+ + Q + + + + + L++ + Sbjct: 238 MVAQ--GMGITVLPKPYIDFLQNEHIQAI-------KIENPTPTIDIGLIYRRDKYMCAA 288 Query: 304 IVWLRETIKNLYASM 318 E +K S+ Sbjct: 289 TRKFIEQLKITVHSL 303 >UniRef50_P39592 Uncharacterized HTH-type transcriptional regulator ywbI n=9 Tax=Bacillales RepID=YWBI_BACSU Length = 301 Score = 274 bits (701), Expect = 4e-72, Method: Composition-based stats. Identities = 37/306 (12%), Positives = 85/306 (27%), Gaps = 22/306 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +D+ L + + +S TKA++ + V+ +SK + L LF + + T Sbjct: 1 MDIRHLTYFLEVARLKSFTKASQSLYVSQPTISKMIKNLEEELGIELFYRNGRQVELTDA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 SM E ++ L + + + + + + YP Sbjct: 61 GHSMYVQAQEIIKSFQNLTSELNDIMEVKKGHVRIGLPPMIGSGFFPRVLGDFRENYPNV 120 Query: 127 TIKLRN-WDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 T +L + + G +DIG ++ + + + + Sbjct: 121 TFQLVEDGSIKVQEGVGDGSLDIGVVVLPANEDI----------FHSFTIVKETLMLVVH 170 Query: 186 KDHPALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 H + L P I + + + G I +++ M Sbjct: 171 PSHRLADEKECQLRELKDEPFIFFREDFVLHNRIMTECIKAGFRPHIIYETSQWDFISEM 230 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 + + P ++ ++ L + ++W K + Sbjct: 231 VSANLGIG--LLPERICRGLDPEKVKVIPL-------VDPVIPWHLAIIWRKDRYLSFAA 281 Query: 305 VWLRET 310 E Sbjct: 282 RAWLEH 287 >UniRef50_A9W9P6 LysR substrate-binding n=3 Tax=Chloroflexus RepID=A9W9P6_CHLAA Length = 301 Score = 272 bits (697), Expect = 1e-71, Method: Composition-based stats. Identities = 47/313 (15%), Positives = 92/313 (29%), Gaps = 24/313 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L + + + VT+AA +++ A+SK +++L LF L T Sbjct: 1 MELRHLRYFEAVARHSHVTRAAAELHIAQPALSKQISQLERELGITLFDRVGRSLRLTEA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 ++ + + + + A + +L L +QRYP Sbjct: 61 GEALLPYARAILAQVEEARAAMAERIGLKAGRVTIGAPPTVGAHLLPPLLTIFHQRYPGI 120 Query: 127 TIKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 T++L LD + G D+ + L ++ + + Sbjct: 121 TLRLHEAGIQSLLDLLEAGITDLAVVALPVTDEQ----------LTVTPLLNEPLVLIVS 170 Query: 186 KDHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 HP ++ + I A +E G + E E + Sbjct: 171 TTHPLARRSEVMMTELRHERWILSPSSYELREATLKACREAGFTPQTVLEGGETETLVRF 230 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 A L ++ P + + L L+W + +P Sbjct: 231 VAA--GLGVSLVPALAVAGCT---------DVVRLTVSDQHLTRSLGLVWRSDRTASPAA 279 Query: 305 VWLRETIKNLYAS 317 LRE + N Sbjct: 280 RALREFLVNEVRQ 292 >UniRef50_C6CY97 Transcriptional regulator, LysR family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CY97_PAESJ Length = 305 Score = 271 bits (695), Expect = 2e-71, Method: Composition-based stats. Identities = 47/314 (14%), Positives = 98/314 (31%), Gaps = 21/314 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L + ++ VT+AA+ ++V SAVS+ + +L LF+ L TP+ Sbjct: 1 MELRQLYYFVKVAKKEHVTQAAEELHVAQSAVSRQIHQLEEELGVKLFLQKGRNLQLTPV 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQ-TPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + + + H P + L L + ++ + + +P Sbjct: 61 GQLFLKRAEVILDDLERAVVEIHEFMDPEKGEIRLGFPHSLGVSVVPQVVAAFRKLHPNV 120 Query: 127 TIKLRNWD-YDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + R + + +GE+D+ F + EVL ++ L Sbjct: 121 KFRFRQGMYPSLIRDMVKGEIDLAFISPFPDE---------HEQVCGEVLLTEELFAILP 171 Query: 186 KDHPALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 HP Q +L + S + QE G I E E + Sbjct: 172 PSHPLAGEQEIDLIQLKEDTFVMFSEGYSLRPIVWEACQEAGFTPKIGFEGEETETIRGL 231 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 A + ++ P Y+ + Q V + + + ++ Sbjct: 232 VAA--GMGVSLLPEMALYHAGVLQSAKVRV-------RTPNVTRNIGIIHRSNEKMPLVA 282 Query: 305 VWLRETIKNLYASM 318 + + + Sbjct: 283 KVFHGFLLRYFNEL 296 >UniRef50_C6IV95 LysR family transcriptional regulator n=4 Tax=Bacillales RepID=C6IV95_9BACL Length = 305 Score = 270 bits (691), Expect = 7e-71, Method: Composition-based stats. Identities = 48/312 (15%), Positives = 99/312 (31%), Gaps = 23/312 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L + ++ VT+AA+ ++V SAVS+ + +L LF+ L T + Sbjct: 1 MELRQLQYFVKVARKEHVTQAAEELHVAQSAVSRQIHQLEQELGVNLFMQKGRNLHLTAV 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQ-TPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + ++ + + + H P + L + L + M+ ++ + + YP Sbjct: 61 GQLFCSRVEMILKDLDRAVSEVHEFLDPEQGEIRLGFPNSLGIHMIPSVVAEFRKLYPNV 120 Query: 127 TIKLRNWD-YDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + R + + GEVD+ F + V+ ++ L Sbjct: 121 KFRFRQGTYPTLIRDVVSGEVDLAFISP---------FPENHDQVTGNVVLTEDLVAILP 171 Query: 186 KDHPALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 HP Q+ L I S + + E G IA E + + Sbjct: 172 PGHPLAGEQSIKLSQLKDEKFILFSKGYSLRPIVWHACLEAGFTPKIAFEGEETDTIRGL 231 Query: 245 AAQPDNLLLATAPRYCQ-YYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 A + ++ P L + + + K+ L+ Sbjct: 232 VAA--GMGVSLLPEMALFQSFTLQPIRVR--------ISEPKVTRTIGLIHRVDEKLPLV 281 Query: 304 IVWLRETIKNLY 315 R + + Sbjct: 282 AQSFRMFLLEYF 293 >UniRef50_C6CYG5 Transcriptional regulator, LysR family n=2 Tax=Paenibacillus RepID=C6CYG5_PAESJ Length = 297 Score = 268 bits (687), Expect = 2e-70, Method: Composition-based stats. Identities = 41/314 (13%), Positives = 97/314 (30%), Gaps = 23/314 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L + + E++ ++AA+++++ ++S+ L+KL LF + + T Sbjct: 1 MELRQLQYVIQIAIEKNFSRAAEKLHIAQPSLSQQLSKLEQELGVLLFRRTTNSVELTQA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + L + + + +L + + YPQ Sbjct: 61 GQVFVDKSQSILDAIEQLKQEMDDMAQMKRGRLVVGTLPITGSHILPLVLPVFGELYPQI 120 Query: 127 TIKLRNWDYDSLDAI-TRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + L L+ + G DI + +++E L + C+ + Sbjct: 121 EVILVEDTTVKLEQLTANGGTDISLLTLP----------LVDQTLEWEPLMEEEICLAVP 170 Query: 186 KDHPALHQT--WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 H +T +++ + + Q L ++ Q+ G I E Sbjct: 171 PSHRLAGRTDEISIEELREEHFVGLKKGQGFRQILVHLCQQAGFTPNIVFESSNIETVQS 230 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 + A + + P+ + P S + + + K + Sbjct: 231 LIAG--GMGITFVPKMLTRAAGGDFV-------PVYLSLKDRPSRTLIIASRKGRYLSKA 281 Query: 304 IVWLRETIKNLYAS 317 V ET+ + Sbjct: 282 AVAFIETMNKTISQ 295 >UniRef50_P20668 HTH-type transcriptional regulator gltC n=17 Tax=Bacillales RepID=GLTC_BACSU Length = 300 Score = 267 bits (685), Expect = 3e-70, Method: Composition-based stats. Identities = 42/314 (13%), Positives = 108/314 (34%), Gaps = 21/314 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L + + V++AA ++V SA+S+ +A L + LF + TP+ Sbjct: 1 MELRQLRYFMEVAEREHVSEAADHLHVAQSAISRQIANLEEELNVTLFEREGRNIKLTPI 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHH-QTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 ++ M+ + ++ P ++ + L +L + + YP Sbjct: 61 GKEFLIHVKTAMKAIDYAKEQIDEYLDPHRGTVKIGFPTSLASQLLPTVISAFKEEYPHV 120 Query: 127 TIKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 LR Y ++A+ ++D+ G + + I ++LF++ + Sbjct: 121 EFLLRQGSYKFLIEAVRNRDIDLALLGP---------VPTNFSDITGKILFTEKIYALVP 171 Query: 186 KDHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 +HP +T +L + + ++ G ++ + + + Sbjct: 172 LNHPLAKQKTVHLIDLRNDQFVLFPEGFVLREMAIDTCKQAGFAPLVSTEGEDLDAIKGL 231 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 + + + P + + V +P+ F + + ++ K P Sbjct: 232 VSA--GMGVTLLPES--TFAETTPRFTVKIPIEFPQVK-----RTVGIIKPKNRELAPSA 282 Query: 305 VWLRETIKNLYASM 318 E + ++ + Sbjct: 283 NDFYEFVIQFFSKL 296 >UniRef50_B5EGJ2 Transcriptional regulator, LysR family n=5 Tax=Geobacter RepID=B5EGJ2_GEOBB Length = 300 Score = 267 bits (683), Expect = 5e-70, Method: Composition-based stats. Identities = 45/313 (14%), Positives = 94/313 (30%), Gaps = 25/313 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +D+ L + + ++ TKAA+ +++ AVS ++ KL + LF +S T Sbjct: 1 MDVRQLRYFIEVAKVKNFTKAAEALHIAQPAVSMAVKKLEQELELSLFNRQDKKVSLTAE 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + + + L + + + + YPQ Sbjct: 61 GEIFLPHAKRILDDLRAAELEMAELKGLSKGEVRLGIPPMISAYFFPDIIRDFKKSYPQL 120 Query: 127 TIKLR-NWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + + + I +GE+D+G + P ++ + + + Sbjct: 121 HLSVLGEGAWRIQKMIGQGELDMGVVAG----------GNFPETLEVRRFLREEIVICVP 170 Query: 186 KDHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 DHP ++ +L F+R P + VL+ G I F + Sbjct: 171 PDHPFAQRKSVSLVEFIREPLVFYKEGYYIREFFLEVLKGAGSAPNIVFETNLFSLVKSL 230 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 + + LVA+P L + + W K + Sbjct: 231 VRNGTGISIFL------RMVVAADTDLVAVPF------DPPLHLDLLIAWKKDTYLSLAN 278 Query: 305 VWLRETIKNLYAS 317 + + A Sbjct: 279 RAFVDFLLQHAAE 291 >UniRef50_Q3AG49 Transcriptional regulator, LysR family n=1 Tax=Carboxydothermus hydrogenoformans Z-2901 RepID=Q3AG49_CARHZ Length = 297 Score = 266 bits (681), Expect = 9e-70, Method: Composition-based stats. Identities = 46/315 (14%), Positives = 106/315 (33%), Gaps = 24/315 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++ N L +++ +++S ++AA+ ++++ A+S + L ++ L + ++ TP Sbjct: 1 MNRNQLEIFRVVAEKKSFSEAARLLHISQPAISMHIQALEEYYGTKLLDRTTKRVTLTPA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTP-RGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + + + + K L A + +L L Y++YP Sbjct: 61 GEILYKYTLHLLSLMDKAQRDISQAAGIIKGKLILGASLTIGGHVLPPLLSSFYRKYPDV 120 Query: 127 TIKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 I + + + L+ ++ +D+GF E + E L D V + Sbjct: 121 NITMEIMNTEKVLERVSDLTLDLGFVEGEVTTG----------ELHVEALARDELVVVVA 170 Query: 186 KDHPALHQ-TWNLDTFLRYPHISICWEQSDTWALDNVLQELGR---ERTIAMSLPEFEQS 241 +HP + + + P + ++ LQ G E I M L E Sbjct: 171 ANHPLAGRGRISWEELATLPLVMREPGSGTRKVIEERLQAAGFKLPELKIVMELGSTEAI 230 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 L A ++ + + + F ++ + H+ Sbjct: 231 KGAVEA--GLGAAILSKWTVRREINWGI------FKQLLIENLPIYREFYVVLNNNKFHS 282 Query: 302 PKIVWLRETIKNLYA 316 P L + + + Sbjct: 283 PATQALIQFCREHLS 297 >UniRef50_C6J455 LysR family transcriptional regulator n=2 Tax=Bacillales RepID=C6J455_9BACL Length = 307 Score = 265 bits (678), Expect = 2e-69, Method: Composition-based stats. Identities = 44/317 (13%), Positives = 97/317 (30%), Gaps = 24/317 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L LL + +E++ ++AA ++++ ++S+ L+KL LF + + T Sbjct: 1 MELRQLLYTLKIAEEKNFSRAADKLHIAQPSLSQQLSKLEQELGVKLFQRNTSTVELTYA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNALSKQIYQRYPQA 126 S + + M L + + + + + +L + YP Sbjct: 61 GASFIAHAQKIMDAVAQLRQEMDDISQLRAGRVVVGSMPITGSHLLPYVLPAFKASYPNI 120 Query: 127 TIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRK 186 + L +L+ + + S L L + YE + ++ + + Sbjct: 121 QVTLLEDTSLNLEKL---------TAEGGTDLSLLSLPLLEPTLSYEPIGEEIIDLAVPP 171 Query: 187 DHPALHQT------WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQ 240 DHP + P I + Q ++ +E G E + E Sbjct: 172 DHPLTKTPGVLEQGVEMKQLENEPFIVLKKGQGFRKMTADLCREAGFEPNVVFESNNIET 231 Query: 241 SLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 + A + + PR+ + L + + + K Sbjct: 232 VQSLVAA--GMGITLVPRFIARAKRS------ELIPAYLPLAAPAPSRTLVIAYRKGRYL 283 Query: 301 NPKIVWLRETIKNLYAS 317 + ET K Sbjct: 284 SKAAEAFIETFKKTMEE 300 >UniRef50_B8K739 Transcriptional regulator, substrate-binding of LysR family protein n=1 Tax=Vibrio parahaemolyticus 16 RepID=B8K739_VIBPA Length = 297 Score = 264 bits (676), Expect = 3e-69, Method: Composition-based stats. Identities = 44/313 (14%), Positives = 91/313 (29%), Gaps = 25/313 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +DL L L + + TKAA ++ + SA+S S+ KL L + +S T Sbjct: 1 MDLKRLHYFNQLAKTGNFTKAADQLGIAQSALSTSIKKLEQQLGLKLVNRTERQMSLTAE 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + ++ ++ + + A + L L +Q + YP Sbjct: 61 GQVLLRHAKIILEDVEQAEKELQELKGLTSGVIKFGAPAMLASYFLPDALEQFKKAYPGI 120 Query: 127 TIKLRN-WDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 I + + GE+D+ + I +L D + Sbjct: 121 QINIHEAGTATLAQMLVNGELDLALIRGDRE----------HEQIRQSLLAQDQIAACVP 170 Query: 186 KDHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 HP ++ LD F + P + +++ Q+ + E M Sbjct: 171 ISHPFAKRSAITLDEFCQQPLVLFKNGYFLRETVNSYCQQNKLTPQVHFETNLPELLKSM 230 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 + + P L A+P + + + W + + Sbjct: 231 VRRQVGIG-TCLPILVA-----DDPELKAIPF------DPPIPLQLGIGWKSSHYLSTAA 278 Query: 305 VWLRETIKNLYAS 317 + ++ Sbjct: 279 KAFVDFLQGTLKQ 291 >UniRef50_Q04778 HTH-type transcriptional regulator alsR n=87 Tax=Bacillus RepID=ALSR_BACSU Length = 302 Score = 263 bits (675), Expect = 4e-69, Method: Composition-based stats. Identities = 43/306 (14%), Positives = 99/306 (32%), Gaps = 26/306 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L + +E KAA+R+N+T +S+ + +L L + + T Sbjct: 1 MELRHLQYFIAVAEELHFGKAARRLNMTQPPLSQQIKQLEEEVGVTLLKRTKRFVELTAA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHH-QTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + ++ + L + ++ +++P Sbjct: 61 GEIFLNHCRMALMQIGQGIELAQRTARGEQGLLVIGFVGSATYEFLPPIVREYRKKFPSV 120 Query: 127 TIKLRN-WDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 I+LR + + +G +DIG A+ E S + L Sbjct: 121 KIELREISSSRQQEELLKGNIDIGILHPPLQ----------HTALHIETAQSSPCVLALP 170 Query: 186 KDHPA-LHQTWNLDTFLRYPHISI--CWEQSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 K HP ++ ++ P I++ + ++ G I E++ + Sbjct: 171 KQHPLTSKESITIEDLRDEPIITVAKEAWPTLYMDFIQFCEQAGFRPNIVQEATEYQMVI 230 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 + + + + P + L L + + + Q +L + + + K N + P Sbjct: 231 GLVSA--GIGMTFVPSSAK--------KLFNLDVTYRKMDQIQLNAEWVIAYRKDNHN-P 279 Query: 303 KIVWLR 308 I Sbjct: 280 LIKHFI 285 >UniRef50_UPI0001745DD5 transcriptional regulator, LysR family protein n=1 Tax=Verrucomicrobium spinosum DSM 4136 RepID=UPI0001745DD5 Length = 290 Score = 263 bits (674), Expect = 5e-69, Method: Composition-based stats. Identities = 31/309 (10%), Positives = 87/309 (28%), Gaps = 22/309 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L+ L + + + + ++AA+ +V+ ++S+ + KL + LF T Sbjct: 1 MELHQLRYMVAVARTGNFSRAAQTCHVSQPSLSQQIQKLEDELGERLFDRLRRHAKLTQA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQ-TPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 ++ + + + + + +L L +YP Sbjct: 61 GERFLPRAVRILEEMDAATREARAANDLDQGRITVGVLPTIAPYLLPKLIAAFSAKYPGV 120 Query: 127 TIKLRNWDYDSLDAI-TRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + + L + EVDI + + LF + + L Sbjct: 121 QVVVHEDTTARLRELTAACEVDIAIASLPLQ----------DERFEVRELFDEELLLALP 170 Query: 186 KDHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 +H + + + L I + + + ++ + E + Sbjct: 171 NNHRLVDQKKIIPEDLLEEKFILMKEGHCLGDQVLHFCHRQDFHPQVSCRSAQMETVQSL 230 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 + + PR ++ + +L + W ++ Sbjct: 231 VQS--GMGITLVPRMALQEDRSVKPVYRSL-------SDPSPKRTIVAFWPRQRPLGKAA 281 Query: 305 VWLRETIKN 313 + ++ Sbjct: 282 AAWLKLMEE 290 >UniRef50_C0ZCK2 Transcriptional regulator n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZCK2_BREBN Length = 295 Score = 263 bits (674), Expect = 5e-69, Method: Composition-based stats. Identities = 43/309 (13%), Positives = 101/309 (32%), Gaps = 22/309 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L + + + +ERS ++AA R+++ ++S+ +AKL LF P + T Sbjct: 1 MELRQIRYVLAVAEERSFSRAANRLHLAQPSLSQQIAKLEKILGVSLFHRLPQHVELTDA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQT-PRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 Q + MS L + K + + +L + +++P Sbjct: 61 GQRFIQVAQTLVDMSEGLEREMRAYAVGESGKLLVGSLPITGAYVLPRVLPTFTKQFPGV 120 Query: 127 TIKLRNWDYDSLDAIT-RGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 ++L L+ + RG++D+ S ++ ++ + + Sbjct: 121 ELQLMEETSSHLEQLLVRGKIDVSLLTMPISDPS----------LEIIPAINEEIFLAVP 170 Query: 186 KDHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 +HP + +L P I + Q + ++ G I + + + Sbjct: 171 ANHPLAKRKEVDLAEVADQPFILLKEGQGFRTISLRLCEQAGFRPRIVFESSNIQTAQSL 230 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 A + L+ AP+ + P + K + + K + Sbjct: 231 VAA--GMGLSFAPKMITLAPGT-------IEPPTYVRIKTKPSRTLVVAYRKDKPLSRPA 281 Query: 305 VWLRETIKN 313 + + Sbjct: 282 EAFVQCLIE 290 >UniRef50_UPI00016C47B2 transcriptional regulator, LysR family protein n=1 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C47B2 Length = 291 Score = 263 bits (673), Expect = 6e-69, Method: Composition-based stats. Identities = 46/311 (14%), Positives = 93/311 (29%), Gaps = 25/311 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLR---AWFDDPLFVNSPLGLSP 64 ++L+ L + + S T+AA+R +VT +S+ + +L LF + Sbjct: 1 MELHQLRYFVAVAETGSFTRAAEREDVTQPTLSEQIMRLESKPHGVGRRLFDRLGRKVVL 60 Query: 65 TPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYP 124 T + + + + A + +L + + +P Sbjct: 61 TDAGRELLGHAQGILAAVKEAERAVRDSAEG-GSLRVGAIPTIAPFLLPGTVTRFRKDHP 119 Query: 125 QATIKL-RNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVW 183 ++L + L + GE+D+ + E LF++ + Sbjct: 120 NVQLQLKEDLTERLLADLLAGELDVALMAMPVR----------DDRLHVEKLFAEPLVMA 169 Query: 184 LRKDHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 L H +T L L P I + + ++ G E + + L Sbjct: 170 LPAKHELASKTEVKLADVLEEPFILLDDMHCFGDQVLSLCHRGGLEPRVVCRGEQIVTLL 229 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 M A ++ P + Q L + +WHK+ P Sbjct: 230 AMVAA--GQGVSIVPEMAATADTSKQCAYRPL-------GKPTPVRTLCAVWHKQRFRPP 280 Query: 303 KIVWLRETIKN 313 + L + K Sbjct: 281 SLRALVDMAKR 291 >UniRef50_P37499 Uncharacterized HTH-type transcriptional regulator yybE n=4 Tax=Bacillales RepID=YYBE_BACSU Length = 292 Score = 262 bits (670), Expect = 2e-68, Method: Composition-based stats. Identities = 49/313 (15%), Positives = 105/313 (33%), Gaps = 24/313 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++ L Q L + + VTKAAK +++T A+S+S+A+L PLF +S Sbjct: 1 MEWEQLEYFQTLARMQHVTKAAKSLSITQPALSRSIARLENHLGVPLFDRQGRSISLNQY 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHH-QTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + M+ ++ P L L ++ L Q YP Sbjct: 61 GHIFLRRVQAMMKEYTEGKEEIQALLKPDQGVVSLGFLHTLGTTLVPDLIGSFQQEYPNI 120 Query: 127 TIKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + +L+ L+ + G++D+ I + L+S+ V++ Sbjct: 121 SFQLKQNHSYWLLERLKSGDLDLCLLASIKPENP----------IQWIKLWSEELFVFVP 170 Query: 186 KDHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 DHP ++ L+ I + + +D + ++ + I E + Sbjct: 171 NDHPLASRESITLNEIAGERFILLKKGYALRMTVDELFEKANIQPNIMFEGEEATTAAGF 230 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 A L ++ P + + + + W K +P Sbjct: 231 VAA--GLGISILPDLKGLDQSK---------ITKIRVSWPECQRVIGIAWIKGRFLSPVA 279 Query: 305 VWLRETIKNLYAS 317 ++ + + ++ Sbjct: 280 ETFKQYVISHFSE 292 >UniRef50_B7IPY3 Transcriptional regulator, LysR family n=74 Tax=Bacillales RepID=B7IPY3_BACC2 Length = 300 Score = 261 bits (669), Expect = 2e-68, Method: Composition-based stats. Identities = 46/312 (14%), Positives = 95/312 (30%), Gaps = 25/312 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L Q + + +TKAA+ +++ ++SK++A+L PLF ++ Sbjct: 1 MELLQLKYFQTVARLEHMTKAAEELHIAQPSLSKTIARLEKDLGVPLFDRQGRQITLNSF 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + + + +A + +L L + +P Sbjct: 61 GKVFLKRVERIFHELSEGEREIKDLAELQQGSITMAVS---IPRILPELLGSFLREHPNV 117 Query: 127 TI-KLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + + E+D S I +E L ++ + + Sbjct: 118 RFQQFLASTPSMKRQLENMEIDFCLSSVPVEGE----------EIVWEPLITEEIFLVVP 167 Query: 186 KDHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 H ++ +L P IS+ D +E G IA + E + Sbjct: 168 SGHRLSNRESIHLHEVKDEPFISMNTGYGFRHLTDEFCKEAGFTPHIAFEVDEPTVISDL 227 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 Q L +A P L L + + L W K+ + Sbjct: 228 IKQ--GLGIAFVPNLTL-------LKNSTLAANKLRIIEPACKRTIGLSWSKKRYLSKTA 278 Query: 305 VWLRETIKNLYA 316 RE + + ++ Sbjct: 279 QQFREFVIDYFS 290 >UniRef50_D2P368 Transcription activator of glutamate synthase operon GltC n=18 Tax=Listeria RepID=D2P368_LISMO Length = 295 Score = 261 bits (669), Expect = 2e-68, Method: Composition-based stats. Identities = 48/312 (15%), Positives = 102/312 (32%), Gaps = 21/312 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L + + +TKA++ ++V SAVS+ + KL LF + T + Sbjct: 1 MELRQLKYFMEVARVEHMTKASENLHVAQSAVSRQITKLEEELGVHLFDRVGRNMQLTSV 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQ-TPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + A + P + + L +L ++ ++YPQ Sbjct: 61 GQDFLKQAAIALNELQKAEALVTEYTDPAKGTVRVGLPNSLSTKVLPSVISTFREKYPQI 120 Query: 127 TIKLRNWD-YDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 T + + + + G +D+ F + I+ F + + + Sbjct: 121 TYQFMEGTNEELTEMLLSGVLDMTFLSPVPESSEQ---------IEAIRFFDEKLKLIVP 171 Query: 186 KDHPALHQ-TWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 K HP T +L + + + + G E IA +F + Sbjct: 172 KTHPLAENFTVSLKELASEKFVLYPEDFDLYKIVTKAANKKGFEPQIAFQSRDFYTIQGL 231 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 L ++ P + +AL + K+L ++ K+ + +P Sbjct: 232 V--GAGLGISILPEMILDGAIFKETKSIAL-------RDKELRRSVGIITTKKRNLSPSE 282 Query: 305 VWLRETIKNLYA 316 R I + ++ Sbjct: 283 NLFRSFIISFFS 294 >UniRef50_UPI00016945AE hypothetical protein Plarl_07755 n=1 Tax=Paenibacillus larvae subsp. larvae BRL-230010 RepID=UPI00016945AE Length = 303 Score = 261 bits (668), Expect = 3e-68, Method: Composition-based stats. Identities = 42/312 (13%), Positives = 94/312 (30%), Gaps = 22/312 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 LD+ L +++ +S TKAA +++T +SK + + L S + T Sbjct: 7 LDIRHLKYFIEVVRCKSFTKAADVLHITQPTISKMIKNIEDELGVVLLDRSTKQVMLTDA 66 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHH-QTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 S+ + ++ L + + + K + + + + + +YP Sbjct: 67 GQSILLQAQQIVKSFENLSIELANTIHLKKGKIRMGLPPMVGSRFFPHIIGEFHHKYPNI 126 Query: 127 TIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 I+L + + G +DIG + D + V + Sbjct: 127 EIQLIEEGAKKVEEQVEEGHLDIGVVLLPIPSGT----------FDSFPFVHEKLMVVVY 176 Query: 186 KDHPALHQTW-NLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 H QT L P I + G + + +++ M Sbjct: 177 PKHRLAGQTVIALKKLEHEPFILFREGFVLHDRIPEECIRAGFQPKVVYESSQWDFISEM 236 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 A L ++ P +++ + L + ++ ++W K + + Sbjct: 237 VAA--GLGISMLPESICRELNPNRVITIPL-------VEPSIDWSLAMIWPKEQYISYAV 287 Query: 305 VWLRETIKNLYA 316 +K Sbjct: 288 REWINFVKQRLQ 299 >UniRef50_C0Z518 Transcriptional regulator n=3 Tax=Paenibacillaceae RepID=C0Z518_BREBN Length = 295 Score = 260 bits (665), Expect = 6e-68, Method: Composition-based stats. Identities = 53/314 (16%), Positives = 95/314 (30%), Gaps = 21/314 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L + + + S T+AA+ + V+ + KL + PLF L T Sbjct: 1 MELVYLHTFREVARYGSFTRAAEELGYAQPTVTAQMQKLEQSYGAPLFERYGRKLRLTQA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQAT 127 ++ E +++ + H + L L + Q+YPQ Sbjct: 61 GEALLPYARELIRLYGESKEVIKH--QTTGPIAIGTIDTLAAFFLPPYLQAFCQQYPQVD 118 Query: 128 IKLRN-WDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRK 186 + LR + + + I G +D G + V+ + V + Sbjct: 119 LVLRTAGEAEIVQQIRDGYLDFGIIFDRP---------CTDPELVTHVIREEELVVVMPP 169 Query: 187 DHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMA 245 H T + P + + L E G + IA E Sbjct: 170 AHRFTTATALTVHDLGGEPLVLTEEGCTYRGMLLEAFGEAGMTQRIACQFSNPEAIKQCV 229 Query: 246 AQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIV 305 L +A P + L Q K L++HK+ +P +V Sbjct: 230 RC--GLGVALLPVMAVQRELAEGV------LTAIPFQSDKPPFSIQLVYHKKKWLSPSMV 281 Query: 306 WLRETIKNLYASMA 319 L +TI + Sbjct: 282 TLVDTITRSQREES 295 >UniRef50_A3I8L6 Transcriptional regulator, LysR family protein n=1 Tax=Bacillus sp. B14905 RepID=A3I8L6_9BACI Length = 292 Score = 259 bits (663), Expect = 1e-67, Method: Composition-based stats. Identities = 34/312 (10%), Positives = 87/312 (27%), Gaps = 22/312 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +++ L + +E TKAA+++ ++ +S+ + L PLF + T Sbjct: 1 MEIRHLHYFMAVCEELHFTKAAEKLGISQPTLSQQIRVLEDELGMPLFDRIGKKIVVTEA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + + + + + + L +Q++P+ Sbjct: 61 GALLFTYATAMLNTLQNVKGAIKDLQEVQGGQIRVGIMPSDLDYRITQLVIDFHQKFPRV 120 Query: 127 TIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRK 186 + + D + + EVDIG + L + V + K Sbjct: 121 KLTIL-ASIDIMRQVLENEVDIGIGTNVEP----------HDRLVIIPLRKEEYVVTVSK 169 Query: 187 DHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMA 245 +HP + + P + ++ +++ G + + + + Sbjct: 170 EHPWAHREAVTIAELKDLPLVMYPEGFLGREIVEETVKKHGFQLHTILETSSVTSIMNLV 229 Query: 246 AQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIV 305 + P L ++ L ++++ + Sbjct: 230 RAN--IGATVQPYPLIQQMNDSDLRIIRL-------TDTIPSRSLSIIYRVDRYVSHATT 280 Query: 306 WLRETIKNLYAS 317 E IK Sbjct: 281 AFIEQIKAYLKE 292 >UniRef50_B9JIM7 Transcriptional regulator protein n=12 Tax=Proteobacteria RepID=B9JIM7_AGRRK Length = 306 Score = 257 bits (659), Expect = 3e-67, Method: Composition-based stats. Identities = 47/307 (15%), Positives = 106/307 (34%), Gaps = 22/307 (7%) Query: 9 DLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLM 68 ++ L Q +++ S +AA+ ++++ A+++ + KL PL + ++PT Sbjct: 6 EILDLRAFQAVVELESFHRAAEALHISQPALTRRIQKLEQSIGAPLLDRTTRHVAPTATG 65 Query: 69 VSMEQNLAEWMQMSNLLLDKPHHQ-TPRGLKFELAAESPLMMIMLNALSKQIYQRYPQAT 127 M + ++ + L + R +A L + + + YP Sbjct: 66 QEMIPLVRRMLEEFDGSLFAIKDSGSQRRGLITMACVPTAAFYFLPTVIRTFGRDYPHIR 125 Query: 128 IKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRK 186 +++R+ + L A+ RGEV+ G L+ + + +E L D + +RK Sbjct: 126 LRIRDLTANEGLQAVARGEVEFGI----------NLMGNSDPDLSFEPLIDDPFVLAMRK 175 Query: 187 DHPALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMA 245 DHP + + +P + + + LD L + SL + Sbjct: 176 DHPLAAFDEIHWNQLEGHPLVVVDRSSGNRTLLDAALARANLRLNWFYEVTHLNTSLGLV 235 Query: 246 AQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIV 305 L ++ PR + L + ++ + + +P Sbjct: 236 EA--GLGISVLPRLATPQEEHPFLVTRP-------IVNPVVTRTIGIVRRRSATLSPAAD 286 Query: 306 WLRETIK 312 + + Sbjct: 287 RFIDMLL 293 >UniRef50_Q65GU9 Transcriptional regulator YbbE n=2 Tax=Bacillus subtilis group RepID=Q65GU9_BACLD Length = 299 Score = 257 bits (658), Expect = 4e-67, Method: Composition-based stats. Identities = 48/313 (15%), Positives = 103/313 (32%), Gaps = 24/313 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L + + + + TKAA ++ A+S+S+ KL PLF+ + T Sbjct: 1 MELYQIDHFIAVSRHKHFTKAALEQRISQPALSRSIKKLEEELGVPLFIRKTKSIRLTKY 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHH-QTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + + + P + ++ L ++ L + ++YP Sbjct: 61 GEQFLIKAKQARLALDEGVQQIRESVNPNAGEISVSFLHTLGSRLMPQLIAEFKKKYPNV 120 Query: 127 TIKL-RNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 +L + + + GE DI S +++ VL ++ + L Sbjct: 121 AFRLYQAANEHLQHMVETGEADICLSSPPLPN----------EHLEWTVLDTEPLYLVLP 170 Query: 186 KDHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 DHP + + + + + D + + L +A E L + Sbjct: 171 ADHPLADRKEVAIRSIAHEDFVCFKPGYGLRYVFDQMCRGLSISPKLAFEGEEVSTILGL 230 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 + L +A P+ ++ V P+ F + E L K + +P Sbjct: 231 VSA--GLGVAILPKTAEH---------VHSPVAFCRVSDYRSERTIGLAVLKDHYLSPAA 279 Query: 305 VWLRETIKNLYAS 317 +E + Y Sbjct: 280 RNFKEFVIEYYRR 292 >UniRef50_Q1IRZ3 Transcriptional regulator, LysR family n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1IRZ3_ACIBL Length = 296 Score = 256 bits (655), Expect = 1e-66, Method: Composition-based stats. Identities = 38/315 (12%), Positives = 97/315 (30%), Gaps = 24/315 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++++ L + + + T+A++ +V ++S+ + KL A LF P T Sbjct: 1 MEVHQLRYFCAVARHGTFTRASEVEHVAQPSLSQQILKLEAELGARLFDRLPRSAKLTVF 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQ-TPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + N ++ + + + + + + +L L + R+P Sbjct: 61 GKAFLPNAERILRQLDEAKTELLEMTSNEKGEVTVGIIPTIAAYLLPKLLNGLSVRHPDV 120 Query: 127 TIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 T+K+ L + G +D+ + + E LF + L Sbjct: 121 TVKISEDITPVLLQRLHDGSIDMAIAALPIPGT----------ELASEELFEEKFYAVLP 170 Query: 186 KDHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 + H + +L R P + + ++ + ++ +F L M Sbjct: 171 EKHRRASRASISLADLNREPFLLLKEGHCFRDSVIAACNQAAMSPSVVFESGQFATILAM 230 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 + + ++ P + F K ++ + + Sbjct: 231 VSA--GMGVSAVPAMAVQPHPG---------CKFIPISGKHSSRKVGIVTSRHHFQGRAQ 279 Query: 305 VWLRETIKNLYASMA 319 L + +++ A Sbjct: 280 RLLLKQMRDACGKSA 294 >UniRef50_C0ZI27 Transcriptional regulator n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZI27_BREBN Length = 307 Score = 254 bits (650), Expect = 3e-66, Method: Composition-based stats. Identities = 35/312 (11%), Positives = 95/312 (30%), Gaps = 22/312 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L + +E ++A++++ + S +S+ + L PLF ++ T Sbjct: 1 MELRQLEYFMAICEEMHFSRASEKLCTSQSNLSQQIKFLENELGVPLFDRLGKRITLTEA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQT-PRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + + + G + ++ +AL + ++ YP+ Sbjct: 61 GKVLLEQSRHVFSHIDYAREAIAAMKNNEGGTLTIGVLPGDADLLFDALLVEFHRLYPKT 120 Query: 127 TIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRK 186 ++ + ++ IT GE+D+G + I LF + + + + Sbjct: 121 SLSVIE-STRIVEQITSGEIDLGVTVLPEP----------DERITVIPLFHEEFALAVHR 169 Query: 187 DHPALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMA 245 HP + + + ++ + G + + L + Sbjct: 170 AHPLAKEKAIKFGQLQEVKMVMFPPDHQARQLINRYCIQEGFRLQPHIETTTLQSQLSLV 229 Query: 246 AQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIV 305 + + P ++ ++ L L++ K Sbjct: 230 KK--GIGGCILPSLLLQNVNDDEIAIINL-------LHPTPSQDICLVYRKDKYMGFAAR 280 Query: 306 WLRETIKNLYAS 317 +T++ S Sbjct: 281 TFIDTLQAYIQS 292 >UniRef50_B5JQV8 LysR substrate binding domain protein n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JQV8_9BACT Length = 300 Score = 253 bits (649), Expect = 4e-66, Method: Composition-based stats. Identities = 37/312 (11%), Positives = 99/312 (31%), Gaps = 23/312 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L+ L + + + T+AA++ V+ ++S + KL LF T Sbjct: 1 MELHQLRYFLAVAEAGNFTRAAEKCFVSQPSLSAQIIKLEGELGQKLFNRLGRRAELTRA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 +E + + ++ + ++ + + +RYP Sbjct: 61 GTFLESRARTILMEVENAERQIKENEEDIRGIVKVGVTPSVTPYLIPPVIRMCRERYPNL 120 Query: 127 TIKLRN-WDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 I ++ +D + +G +++ S ID E + + + + Sbjct: 121 EINIQENLRRRLIDEVQQGHLEVAISSYTGDAA----------NIDAEPILQEDLVLAVS 170 Query: 186 KDHPAL--HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 K H +++ F P + + + + + ++ E + + Sbjct: 171 KTHRLATQKSKVSIEDFKDEPLVLLGESATLGDKVFDFFDKMNIEPKVVALCSQVRSVKE 230 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 M L +A P + + + + + ++++ L H R +P Sbjct: 231 MV--NLGLGVAILPAMAKEEH-------LPFEIVYRSLVSERMKRLLFALTHSRRYLSPG 281 Query: 304 IVWLRETIKNLY 315 + I+ + Sbjct: 282 ARVFVDLIREVA 293 >UniRef50_B7RZY7 LysR substrate binding domain protein n=1 Tax=marine gamma proteobacterium HTCC2148 RepID=B7RZY7_9GAMM Length = 318 Score = 253 bits (649), Expect = 5e-66, Method: Composition-based stats. Identities = 45/318 (14%), Positives = 100/318 (31%), Gaps = 22/318 (6%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 + + L L L Q +S +A++ ++++ A+S ++ + LF S L Sbjct: 20 LMNVSLRQLRAFVTLAQSQSFAEASELLHLSQPALSVAIKNMEQETGGSLFSRSTRSLQL 79 Query: 65 TPLMVSMEQNLAEWMQMSNLLLDKP-HHQTPRGLKFELAAESPLMMIMLNALSKQIYQRY 123 +P + + D + K +A M + Y Sbjct: 80 SPEGRQFLPVARRLLADWDQAFDDLGRAFNLQQGKIRVAVMPSFAMNQFPEALAPFQREY 139 Query: 124 PQATIKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCV 182 P I + + + +DA+ G+V++G + +++ LF+D Sbjct: 140 PDINISVEDVVMESVIDAVREGQVELGITFEPDQM----------DGLEFTPLFTDRWIA 189 Query: 183 WLRKDHPA-LHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQS 241 + P + + + P I++ + L E G T + + Sbjct: 190 LVHPKSPLAARKKLSWTALMEEPFIAMNRGSWSRNTTEKALSEAGVTPTRLLEANQLATI 249 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 M L A P+ C+ + + + +E + KR S + Sbjct: 250 GRMV--SVGLGTAVVPQLCRQQMESLGILCK-------TIGRPSIERQVGIFTRKRRSLS 300 Query: 302 PKIVWLRETIKNLYASMA 319 L + ++ ++ Sbjct: 301 GAAQALIAHLLEHFSKVS 318 >UniRef50_C6XIT5 Transcriptional regulator, LysR family n=1 Tax=Hirschia baltica ATCC 49814 RepID=C6XIT5_HIRBI Length = 318 Score = 253 bits (648), Expect = 6e-66, Method: Composition-based stats. Identities = 74/314 (23%), Positives = 132/314 (42%), Gaps = 21/314 (6%) Query: 6 TTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPT 65 DLNLL L +ER+VT+AA+R+NVT AVS +L++LR F D LF+ +P G+ PT Sbjct: 3 KKFDLNLLNTFDALWRERNVTRAARRLNVTQPAVSNALSRLRETFGDELFIRTPSGVDPT 62 Query: 66 PLMVSMEQNLAEWMQMSNLLLDKPHHQTP--RGLKFELAAESPLMMIMLNALSKQIYQRY 123 + ++ E ++ L P F + A ++L L + + ++ Sbjct: 63 ERCSEIAIDVREALRHVERTLASHDSFDPTVSERTFRIGAMDYFDHVVLPPLMEDLRKKA 122 Query: 124 PQATIKLRNWD-YDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCV 182 P+ +++ ++ DA+ G++D F + P I++ + + + Sbjct: 123 PRVDLRISPVKLGETYDALDSGDLDFLF----------FSGTEPPKRINFSPMLEEKFVL 172 Query: 183 WLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 +R +HP + Q LD + HI +D++L E G R +A++ Sbjct: 173 IMRANHPKMCQEMTLDAYADLTHIVFSTRGDSHTRIDDLLAENGLRRRVALTSSHHTSIA 232 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 D + L+ R Y L V P+ F L W +R + +P Sbjct: 233 ETVRDTDMVALS-PSRLAHRYVHRGGLIAVQPPVEFP-------HFHLRLYWSRRLNSDP 284 Query: 303 KIVWLRETIKNLYA 316 +WLR + ++ Sbjct: 285 GAMWLRNILGDVCK 298 >UniRef50_Q3AG03 Transcriptional regulator, LysR family n=2 Tax=Clostridia RepID=Q3AG03_CARHZ Length = 302 Score = 253 bits (647), Expect = 7e-66, Method: Composition-based stats. Identities = 35/308 (11%), Positives = 93/308 (30%), Gaps = 25/308 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++ L + + S T+AA++++V +++ ++ L LF S + T Sbjct: 1 MEFRQLEYFYAVSKLNSFTRAAEQLHVAQPSITIAINNLEQELKVQLFDRSKRKVVLTDE 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTP-RGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 Q++ + ++ + + +L + + + K YP Sbjct: 61 GKLFLQHVEKILKDVKKAQSELEDLKNYKKGVIKLGIPPMIGAYLFPKIFKGFKNAYPHL 120 Query: 127 TIKLR-NWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + +R + + + GE+D+G + + D + + Sbjct: 121 ELHVREEGSWAMVSLLENGELDLGLIILPEQSE----------NLCMLPITKDQIVLCVS 170 Query: 186 KDHPALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 ++H + +L I + + + + G I +S + E + Sbjct: 171 ENHRFSQEKRISLRQLEDEQFILLKEDSYTRHKIIALCNYYGFSPNILLSSCQIETIKEL 230 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 + L + +V++ L + + L W K + Sbjct: 231 V--SNGLGITFLMNGITKKWD----KIVSIQLEEP------MNITIGLAWQKDRCLSRAA 278 Query: 305 VWLRETIK 312 ++ Sbjct: 279 QAFIGFVQ 286 >UniRef50_Q7N4W1 Hca operon transcriptional activator n=2 Tax=Photorhabdus RepID=Q7N4W1_PHOLL Length = 294 Score = 251 bits (642), Expect = 3e-65, Method: Composition-based stats. Identities = 42/308 (13%), Positives = 100/308 (32%), Gaps = 25/308 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L + +E + TKAAK+++ ++S+ + L + L + +S T Sbjct: 1 MELRHLRYFIAVAEELNFTKAAKKLHTAQPSLSQQIKDLEDYIGSTLLERNKRRVSLTKA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQAT 127 Q ++ + + + + +L + +P A Sbjct: 61 GEVFLQQARLILENAEKAKKMARRAAQEQIVLTIGFVPSAEVKVLPEVIPIFRLAHPGAK 120 Query: 128 IKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRK 186 ++L + + + + +G++D+ F S ID++V+ ++ V + Sbjct: 121 VELISLFNPGQEEKLLQGDIDVAFMRPPIKSDS----------IDFKVILNEPLVVLMPA 170 Query: 187 DHPAL-HQTWNLDTFLRYPHISICW--EQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 +H + +++ I+ ++N E I + L Sbjct: 171 NHRLRYCEKISVNDLQGENFITPDPTQSGVLQQIIENYFTEHNVVPNIIQTANNMLLILN 230 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 M NL A P Y + + + W K N+ + Sbjct: 231 MV--SLNLGCAIVPFYITSIMTDA--------VICRPLSGYSPTIELIMAWRKDNT-SEL 279 Query: 304 IVWLRETI 311 ++ L + + Sbjct: 280 LLHLIDVV 287 >UniRef50_Q46WQ0 Transcriptional regulator, LysR family n=1 Tax=Ralstonia eutropha JMP134 RepID=Q46WQ0_RALEJ Length = 304 Score = 250 bits (641), Expect = 3e-65, Method: Composition-based stats. Identities = 52/315 (16%), Positives = 101/315 (32%), Gaps = 24/315 (7%) Query: 4 SITTLD--LNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLG 61 +I ++ L L + QER T+AA++++++ S+VS + +L LF Sbjct: 3 NIGNMNVSLRQLRAFIAVAQERHFTRAAEKLDLSQSSVSALIHELEDNLGLKLFDRHTRQ 62 Query: 62 LSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQIY 120 L T + + + + + ++ + +AA S +ML ++ Sbjct: 63 LHITQAGEELLPLVKKAVADIDSAIETSSELRTLGRGRVSIAASSIQAALMLPRFIREFS 122 Query: 121 QRYPQATIKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 +P + + + + ++ GEVD G + L +D Sbjct: 123 LGHPGVKVDIHDVSEHEVPKMVSSGEVDFGIGTIPEGQP----------DLTAHRLSTDP 172 Query: 180 PCVWLRKDHPALHQ-TWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEF 238 + + DHP L + T + P I LD L G + + Sbjct: 173 FVIVMPPDHPLLRRKTLRWEDVAPIPLIGPHKGNPIRDCLDTALAARGITLSRLHEVLLP 232 Query: 239 EQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRN 298 + M L +A + L V + +LL H Sbjct: 233 LTMVGMVEA--GLGIAVMSAAVTRLTEALGLATV-------MPTDPVIHREISLLVHADR 283 Query: 299 SHNPKIVWLRETIKN 313 S +P R+ + Sbjct: 284 SLSPPAQRFRDLLMR 298 >UniRef50_C7I3E5 Transcriptional regulator, LysR family n=1 Tax=Thiomonas intermedia K12 RepID=C7I3E5_THIIN Length = 301 Score = 250 bits (641), Expect = 4e-65, Method: Composition-based stats. Identities = 39/315 (12%), Positives = 97/315 (30%), Gaps = 28/315 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L + ++ S ++AA+R++++ +S + L L S G++ T Sbjct: 1 MELRQLRYFVTIAEQGSFSRAAERLHISQPPLSTQIKALEDEIGARLLERSNRGVTLTAA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQ-TPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + +++ + +++ + S +L K RYPQ Sbjct: 61 GAAFFEDIRSVLAQLEHAVERVRQAERGDAGTLSIGFVSIADFGILPPTLKSFRARYPQV 120 Query: 127 TIKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 ++L D + + E+D+ + + L + + Sbjct: 121 DVQLHELTTDAQIRELRAAELDLSIGLAPVDEP----------GLTFTPLLQEPLMLAAP 170 Query: 186 KDHPALHQ---TWNLDTFLRYPHISICW--EQSDTWALDNVLQELGRERTIAMSLPEFEQ 240 HP L + +L + P I ++ Q G I + + Sbjct: 171 TTHPVLQEGSGAVDLRALAKEPFIVPPRNIGPGLYDLTLSLCQAAGFAPRITQHARQMQT 230 Query: 241 SLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 + + + +A P + + + L + + +L + S+ Sbjct: 231 VIGLV--SCGMGVALVPASLRQL-KRPGVQYRPL-------LGQPATIELGILQLSQTSN 280 Query: 301 NPKIVWLRETIKNLY 315 P + ++ Sbjct: 281 -PLRDNFNQALREAA 294 >UniRef50_A4ISN4 Transcriptional regulator LysR family n=6 Tax=Geobacillus RepID=A4ISN4_GEOTN Length = 305 Score = 250 bits (639), Expect = 5e-65, Method: Composition-based stats. Identities = 41/313 (13%), Positives = 97/313 (30%), Gaps = 24/313 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +D+ L + +E +TKAA+++++ +S+ L +L PLF + T Sbjct: 2 IDVKQLKYFVTIAEEGQITKAAQKLHIAQPPLSQQLKQLEEKLGVPLFDRKAKKMELTAP 61 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQT-PRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + + + + + + L +Q ++++P Sbjct: 62 GKLFYEKAKQLLHQLDDAIAEVKEIETGATGTLAVGCVKS-CFSYLAQTIRQFHEQFPNV 120 Query: 127 TIKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 T LR D S+ + +DIG D L SD L Sbjct: 121 TFHLREGDTFSICQLLQERHIDIGIVRLPIDSS----------HYDIIPLPSDRYVAVLP 170 Query: 186 KDHPALHQTWNLDTFLRYPHISICW--EQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 + + ++ F +P + + + + G E + P+ L Sbjct: 171 EHWALSRSSLSMRDFAEWPLLLLHRVHGAGQYERVVEECRRHGFEPNVLCECPDATILLS 230 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 + AQ + P+ +L + ++ ++ ++ ++ Sbjct: 231 LVAQ--GMGATIVPQSTVSLFRLPGIRVLP-------IVDSSMKAEAAVIIDRQRYVPKS 281 Query: 304 IVWLRETIKNLYA 316 + ++ A Sbjct: 282 VHHFLNLLQQTVA 294 >UniRef50_B4WMZ4 Putative uncharacterized protein n=1 Tax=Synechococcus sp. PCC 7335 RepID=B4WMZ4_9SYNE Length = 289 Score = 250 bits (639), Expect = 6e-65, Method: Composition-based stats. Identities = 49/295 (16%), Positives = 102/295 (34%), Gaps = 25/295 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L + E +AAKR+N+ +S + +L + D LF + +S T Sbjct: 1 MNLRQLNYFLAVANELHFGQAAKRLNMAQPPLSMQIKQLESDLDVQLFERTQRKVSLTAA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQT-PRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 +++ + ++ + K + +A S M +L Q YPQ Sbjct: 61 GEVLKKEAEQILERIEVARRKTQQADRGETGQMAIAFVSSAMYSILPPWISAFRQSYPQV 120 Query: 127 TIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + + + + + ++DIGF S I +V++ + V L Sbjct: 121 ALTFQEATGLEQISGLLSHQIDIGFVRPPIEDVS----------ISDKVVWREPLVVALP 170 Query: 186 KDHPAL-HQTWNLDTFLRYPHISICWE--QSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 + H H+ ++ + + P I I + + Q+ I + + + L Sbjct: 171 EGHRLSTHKAISISSLEQEPFILIQRPLASEMYDKIISFCQQASFSPNITQTAQQLQTIL 230 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKR 297 + A L +A P Q + + + + V ++W K Sbjct: 231 GLVAAN--LGIAILPTAAQKLQRAG--------ICYRPFIETTPAVELVMIWRKD 275 >UniRef50_C8WSN1 Transcriptional regulator, LysR family n=1 Tax=Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 RepID=C8WSN1_ALIAD Length = 290 Score = 250 bits (639), Expect = 7e-65, Method: Composition-based stats. Identities = 49/312 (15%), Positives = 93/312 (29%), Gaps = 26/312 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L + + +S +AA I V+ A+S+++ KL PLFV + G+ TP Sbjct: 1 MELVQLEYFLAVAEYQSFRRAADAIRVSQPALSRAIQKLEGDLGAPLFVRTAQGVRLTPC 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTP-RGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + + + K + L L + + + +P Sbjct: 61 GEAFLPHARQALAEVAAGARKVAELAGQARGVLHVGLIYSLGTRFLPDVIRTFTRTHPGV 120 Query: 127 TIKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 T++L L + GE+DI F + + + + Sbjct: 121 TVRLSEAPTQKLLQQLDAGEIDIAFCT-----------PQHAPHLTLVEILQEELVAIVP 169 Query: 186 KDHPA-LHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 DHP +L P ++ E ++ E G +AM E Sbjct: 170 LDHPLAAKDQCHLSDLAGEPFVAYARESGIRHVIERYCAEAGFTPRVAMEGVEDLTVAG- 228 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 L LP+ + + + WH + +P Sbjct: 229 ----------LVAAGVGVAVVPLHAQLDQLPVHVLRLCEP-CKRSVYMAWHTHTTLSPVA 277 Query: 305 VWLRETIKNLYA 316 +K + A Sbjct: 278 RAFIAFVKRMCA 289 >UniRef50_B5JN19 Putative uncharacterized protein n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JN19_9BACT Length = 296 Score = 250 bits (639), Expect = 7e-65, Method: Composition-based stats. Identities = 42/314 (13%), Positives = 97/314 (30%), Gaps = 21/314 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L + +++ E +AA+++N+ A+S + +L LF G+ T Sbjct: 1 MELRQIRSFRVVAAEEHFRRAAEKLNIAQPALSLQVRQLEEELGTQLFERVGRGVRLTDA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + + + + + + A+ +RYPQ Sbjct: 61 GSLFWDYADRIVSLVDESAEATREHSDLIRGRLRIGIAQTPNCCFGPAVISAFKRRYPQV 120 Query: 127 TIKLRNWDYDSLD-AITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + L D ++ ++ +GE+D+G + E ++ + Sbjct: 121 FVSLAELAADEIESSLLKGELDLGIGFGPCDSP----------NLSSESIYEERFVALAP 170 Query: 186 KDHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 + HP + +L T + I + + + +L +A+ + E + Sbjct: 171 RGHPWFNKKNISLKTLAQEELILLTRDYCTRRIFEKTCDDLDVSLKVAIEMNTIEGIIAS 230 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 L + L V Q + L++ K +P Sbjct: 231 LEST-GLASVLPAQIVNSPLMSPTLRSVP-------IAQPGIRRKVALVYRKSGYLSPAA 282 Query: 305 VWLRETIKNLYASM 318 + K L S+ Sbjct: 283 HAMATEWKTLAKSL 296 >UniRef50_C2BX95 Transcriptional regulator n=1 Tax=Listeria grayi DSM 20601 RepID=C2BX95_LISGR Length = 297 Score = 249 bits (638), Expect = 8e-65, Method: Composition-based stats. Identities = 45/311 (14%), Positives = 89/311 (28%), Gaps = 21/311 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L + +T+A++ ++V SAVS+ + KL LF + T + Sbjct: 1 MELRQLKYFMEVASFEHMTQASENLHVAQSAVSRQITKLEEELGIKLFDRVGRNMQLTTV 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQ-TPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + P + + L +L A+ YP Sbjct: 61 GEDFLNQVKVAYNELLKAEAIVTEYSDPTKGSVRIGLPNSLASKVLPAVISAFRAEYPDV 120 Query: 127 TIKLRNWD-YDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 T + + GE+DI F + +++ F + V Sbjct: 121 TYHFVEGSNAELKQLLLDGEIDITFLSP---------VPVTDDSVEAVKFFDEKLKVIFP 171 Query: 186 KDHPALHQ-TWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 HP + +L+ I + ++ IA +F + Sbjct: 172 ATHPLADRYNVSLEELAAEKFILYPPNFDLFKIVTTAAEKKAISLDIAFQSQDFYTIQGL 231 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 L ++ P + L + K+L L+ K+ +P Sbjct: 232 V--GAGLGISILPEMILDGTIFKDTKALPL-------RNKELRRSVGLVVTKKRQLSPTE 282 Query: 305 VWLRETIKNLY 315 + IK + Sbjct: 283 KLFYQFIKKFF 293 >UniRef50_C9KJ25 Transcriptional regulator GltC n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KJ25_9FIRM Length = 307 Score = 249 bits (638), Expect = 8e-65, Method: Composition-based stats. Identities = 53/310 (17%), Positives = 108/310 (34%), Gaps = 24/310 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L Q + + T+AA+ + V+ SA+S+S+ KL LF T Sbjct: 1 MELTQLKYFQAMAKCHHFTQAAEEMAVSQSALSRSIQKLEQELGVTLFERHGRTSELTEA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQAT 127 ++ ++ L + L+ L L + +Q ++RYP Sbjct: 61 GQKFLFHVDRVIRELALAEQEIELDNGGAGVVHLSFLHSLGDTFLPLILRQFHERYPHID 120 Query: 128 IKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRK 186 +KL + L + +T GE DI + + L+S+ + + + Sbjct: 121 VKLNQQNSSMLSEQLTSGETDICLCS-----------TMNEPDTAWMYLWSEEMFLVVPE 169 Query: 187 DHPALHQ-TWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMA 245 DHP + NL P +++ E + ++ L I E + Sbjct: 170 DHPLAQKSRVNLREIEDEPFVALKPEYTLRQQVNQFLDLAESHPQIVFEGDEVHTLVSFV 229 Query: 246 AQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIV 305 A +L ++ P L +V +P+ F + + W+ +P + Sbjct: 230 AA--HLGVSILPHV----PCTEHLGVVFVPISFPLCK-----RAVGIAWNTSRPLSPAAM 278 Query: 306 WLRETIKNLY 315 ++ + + Sbjct: 279 TFQQFTIHHF 288 >UniRef50_Q46MA3 Transcriptional regulator, LysR family n=1 Tax=Ralstonia eutropha JMP134 RepID=Q46MA3_RALEJ Length = 296 Score = 249 bits (638), Expect = 9e-65, Method: Composition-based stats. Identities = 40/313 (12%), Positives = 101/313 (32%), Gaps = 26/313 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +DL L + +E + T+AA+R+++ +S + +L D L + + T Sbjct: 5 MDLRHLRYFIAIAEELNFTRAAERLHIAQPPLSMQIRQLEEEMDVTLLNRTRRHVELTEA 64 Query: 68 MVSMEQNLAEWMQMSNLL-LDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + ++ + + + + +L + + +R+P Sbjct: 65 GRIFLEQARQILRATERAVVQAQRAHRGETGRLTVGFFEHTSYTLLPPILRAYRERFPSV 124 Query: 127 TIKLRNWD-YDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 I LR + +A+ RG+ DI F + +E + + + + Sbjct: 125 EILLRWFPVVKQAEALRRGDADISFMRPVPDL----------EEVTWETILEEPFVLAVP 174 Query: 186 KDHPAL-HQTWNLDTFLRYPHIS--ICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 HP ++ +L + P + + G + + + L Sbjct: 175 ARHPLANAESISLKKCAQEPFVMYIPEMAPDFHAMNMRMCASAGFVPKVISEVGQVYTLL 234 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 + + + P + H + + + ++ + L + +R P Sbjct: 235 GLVSSGAGIG--FVPASVRKVKFDH--------VVYKPIEGRQPTIEIMLGYSQRTP-TP 283 Query: 303 KIVWLRETIKNLY 315 + ET K++ Sbjct: 284 LMTAFIETAKSML 296 >UniRef50_C4ZHT7 Transcription activator of glutamate synthase(LysR family) n=6 Tax=Clostridiales RepID=C4ZHT7_EUBR3 Length = 293 Score = 248 bits (635), Expect = 2e-64, Method: Composition-based stats. Identities = 51/314 (16%), Positives = 106/314 (33%), Gaps = 26/314 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L+ L ++L QE T+AA+ +++T ++S ++++L LF + T Sbjct: 1 MNLSQLQYFKVLAQEEHYTRAAQMLSITQPSLSHAISQLEQELGTRLFEKKGRNVVLTRY 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNALSKQIYQRYP-- 124 + E +++ N + + LA + L ++ YP Sbjct: 61 GKMFLPYVEESLKVLNEGVQRIQEVNGSRHGIIHLAYIYTMGSEFAPKLVRKFLDAYPDY 120 Query: 125 QATIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVW 183 + +D + + DI FS + ID++ + + + Sbjct: 121 DIEFHFTVGTTGEIIDGLKDDKYDIVFSSYKDGE----------QDIDFKKIANQKLVLA 170 Query: 184 LRKDHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 + DHP + +L + YP I +D + +E+G+ +A + E Sbjct: 171 VPMDHPLSIKDSVDLRDTIEYPQIYFEKGSGLRPVIDQMFEEIGQFPKVAFEMEEDSSMA 230 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 + AQ +A P L +L + + E L K+ +P Sbjct: 231 GLVAQ--GFGIAVMPDI---------PILRSLSVKTLDIYNPPYERAVYLATLKQRYLSP 279 Query: 303 KIVWLRETIKNLYA 316 + A Sbjct: 280 VAKAFIRFVIEETA 293 >UniRef50_A1SY80 Transcriptional regulator, LysR family n=1 Tax=Psychromonas ingrahamii 37 RepID=A1SY80_PSYIN Length = 294 Score = 248 bits (635), Expect = 2e-64, Method: Composition-based stats. Identities = 44/313 (14%), Positives = 88/313 (28%), Gaps = 25/313 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +D L +L Q + TKAA+ + + SA+S S+ KL L + +S T Sbjct: 1 MDFKRLYYFTVLAQTGNFTKAAEELGIAQSALSMSIQKLEKQLALKLINRAERKMSITSD 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + ++ + + + L + + L QRYP Sbjct: 61 GQVLLKHAQKILDNVKQAKIQLQELKGLESGTINLGTPAMIGSYYLPDTLALFKQRYPGI 120 Query: 127 TIKLRN-WDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 I + + + GE+D+ + H I L + + Sbjct: 121 QINIHEAGTATLANMLLDGELDLAMIRADRH----------HDNIRCITLAKEQIVACVP 170 Query: 186 KDHPALHQ-TWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 ++H L+ F P + A+ + Q+ G I E + Sbjct: 171 REHEFAKCYNITLEQFCNQPLVLFREGYFLREAVSSYCQQHGINPDIRFETNLIELLKSL 230 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 + + LV +P + + + W + + Sbjct: 231 IRKKIGISTCLP------IILTEDSELVTVPF------NPPIPIHLGIGWKASHYLSQAS 278 Query: 305 VWLRETIKNLYAS 317 L ++ Sbjct: 279 QALVTFLQEEMDG 291 >UniRef50_B8KMT5 Transcriptional regulator, LysR family n=1 Tax=gamma proteobacterium NOR5-3 RepID=B8KMT5_9GAMM Length = 300 Score = 248 bits (635), Expect = 2e-64, Method: Composition-based stats. Identities = 48/308 (15%), Positives = 109/308 (35%), Gaps = 22/308 (7%) Query: 10 LNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMV 69 +N ++ + + S +AA R++++ A+S ++ L LF + ++ TP Sbjct: 5 INQVMAFSAVARTGSFAEAALRLHLSQPALSIAIKNLEEALGGKLFARTTRSVTLTPEGK 64 Query: 70 SMEQNLAEWMQMSNLLLDKPH-HQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQATI 128 + + L H + R K ++AA + +L + +++YP + Sbjct: 65 AFYPVARRLLSDWEQSLQDVRNHFSLRRGKLDIAAMPTYTINLLPKILASFHRQYPNINV 124 Query: 129 KLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKD 187 + + + ++ + ++G + + ++ LF D K Sbjct: 125 TVHDVIAESVVEMVREHRCELGVTFDPDDSP----------DLTFQPLFIDRFIAIFPKQ 174 Query: 188 HPALHQ-TWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAA 246 HP L + + L YPHIS+ +D L + G T A + M Sbjct: 175 HPLLGKGSLRWRDLLDYPHISLQKPAGTRARIDQTLAKKGLRITPAFESHQLVSIGRMVR 234 Query: 247 QPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVW 306 + L L+ P + + L A+ P + ++ ++ + + Sbjct: 235 E--GLGLSVVPSTSRAQMKEMGLECRAIAFPV-------ITHQLGVITRRQQTLSVAAQA 285 Query: 307 LRETIKNL 314 + I+ + Sbjct: 286 MASLIREM 293 >UniRef50_A4F7Y9 Transcriptional regulator, LysR family n=3 Tax=Actinobacteria (class) RepID=A4F7Y9_SACEN Length = 333 Score = 248 bits (634), Expect = 2e-64, Method: Composition-based stats. Identities = 43/313 (13%), Positives = 90/313 (28%), Gaps = 27/313 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L + +E+S+T+AA R+++ +S L KL L + G T Sbjct: 1 MELRHLRYFVAIAEEQSLTRAAARLHIAQPPLSAQLRKLETELGAVLVHRTARGTQLTDA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + + + + L ++L + +Q RYP+ Sbjct: 61 GRVLLEEARRILHEVDHAAQMTREAGSGRVGRLSLGFIPSASNVVLPPILRQFKARYPEV 120 Query: 127 TIKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 ++LR D ++ + +D GF S + + D + L Sbjct: 121 RLRLREMRPDEIVERLHDRRIDAGFFYLPIDDPS----------LHVRSVADDSLVLALP 170 Query: 186 KDHPALHQT-WNLDTFLRYPHISICWE--QSDTWALDNVLQELGRERTIAM-SLPEFEQS 241 HP +L P I ++ + G + + + Sbjct: 171 STHPLADSPEVDLRAVAGEPFILPPRYDMPGLYTSVTQACERAGFTPRVVQPDVWLMQTI 230 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 + + A + +A P Q + F + W + Sbjct: 231 VGLVAG--GMGIAVVPSSVQQIPRAGA--------TFVPLTDVSATARMAMAWRREIG-T 279 Query: 302 PKIVWLRETIKNL 314 P + + Sbjct: 280 PVLRSFLDIAAAA 292 >UniRef50_B1ZUQ0 Transcriptional regulator, LysR family n=1 Tax=Opitutus terrae PB90-1 RepID=B1ZUQ0_OPITP Length = 301 Score = 248 bits (634), Expect = 2e-64, Method: Composition-based stats. Identities = 35/311 (11%), Positives = 90/311 (28%), Gaps = 21/311 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L + + T+AA+R NVT ++S+ + L LF T Sbjct: 1 MELYQLRYAVAVADTGNFTRAAERCNVTQPSLSQQIINLEKEVGHKLFHRLGRRAVLTEA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQAT 127 + + + + + + A + +L + + + P Sbjct: 61 GAVFIERARQIVYDVENAAKELSDHPSLDRRITVGAIQTVAPYLLLPMIEVCKRELPNLQ 120 Query: 128 IKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRK 186 I L D + + G++D+ + E L ++ + + K Sbjct: 121 INLIEDFRVDLVHGVVEGDLDLAIVTLPVD----------DPRVSVEPLMTEPLLLVVGK 170 Query: 187 DHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMA 245 +HP + +++ +++ + + + + + + + Sbjct: 171 NHPFATRKEISINDLADETFVTMGESSTLAAQIRSFFGGHNFQPKVGYRCAQVATLKTLV 230 Query: 246 AQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIV 305 A L ++ PR Q L + L ++ H + + Sbjct: 231 A--MGLAISILPRVDQEEKDRETLTYLRL-------TGSAPTRELVVVRHLQRYQSRGAQ 281 Query: 306 WLRETIKNLYA 316 + + Sbjct: 282 QFLQLLHEQVR 292 >UniRef50_A9WGB3 LysR substrate-binding n=2 Tax=Chloroflexus RepID=A9WGB3_CHLAA Length = 304 Score = 248 bits (634), Expect = 2e-64, Method: Composition-based stats. Identities = 38/312 (12%), Positives = 82/312 (26%), Gaps = 24/312 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L + +E +T+AA+++ ++ A+S+ + L LF + T Sbjct: 1 MELRQLRYFLAVAEEGHITRAAEKLYISQPALSQQIKLLEEEIGTVLFDRIGRRIRLTAA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + +Q + + + ++ L YP Sbjct: 61 GEILVAHARRALQELSEAQVAIDELNGLQRGMLRIGVVQTVNAYLMPDLVAAFTNAYPAI 120 Query: 127 TIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 ++++ D + G++ IG + E LFS+ V + Sbjct: 121 SLQIEELATRDIEQRLADGDLQIGIGFVPPETA----------GVTGEELFSEDLVVVVS 170 Query: 186 KDHPALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 + HP + + + P I + D G + + + + L Sbjct: 171 RQHPWADLPQLPVQSLHQQPLILLSTTFCTRRLWDRCTHIAGIQPRVQIEMNTIGSILAA 230 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 Q L P L LL+ Sbjct: 231 VRQLT--LATVLPAMVLSGQ---------PDLVGIPLVDPTPRRTVGLLFRHNAYRCAAT 279 Query: 305 VWLRETIKNLYA 316 + Sbjct: 280 RAFVAMTRAKLR 291 >UniRef50_Q1IHL3 Transcriptional regulator, LysR family n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1IHL3_ACIBL Length = 306 Score = 248 bits (634), Expect = 3e-64, Method: Composition-based stats. Identities = 38/314 (12%), Positives = 99/314 (31%), Gaps = 26/314 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L + +E +AA R+++ +S+ + KL LF + + T Sbjct: 5 IELRHLRYFVAVAEELHFGRAAARLHLAQPPLSQQIKKLEEILGYALFTRTSRAVKLTSA 64 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQ-TPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + ++ +++ + M+ +L A+ + + YP+ Sbjct: 65 GEVFLERAQRTLRHVREDMEEVRSIGRGEVGYLRVGFIGSSMLTVLPAIFGRYRRAYPKV 124 Query: 127 TIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 ++L+ ++ + + +D G + E L+S+ L Sbjct: 125 NLQLQESYTSGVVEGLLKATLDAGILRDGGPT----------HGLTVERLYSEPFVAVLP 174 Query: 186 KDHPAL-HQTWNLDTFLRYPHISICWEQS--DTWALDNVLQELGRERTIAMSLPEFEQSL 242 HP + + P + S ++ + G + P++ L Sbjct: 175 GKHPLAKQRALSPRALKDEPFVFYPPYSSKLAYEKPVSICEAHGFRPKVVQEAPQWLTIL 234 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 + L ++ AP + + A + + + L + + Sbjct: 235 RLV--GAGLGVSIAPACVE--------RIAAPDVVCIPLRGAAVRSDIELAFREGEGRE- 283 Query: 303 KIVWLRETIKNLYA 316 + E +++ +A Sbjct: 284 IVRAFAEIVRDGFA 297 >UniRef50_A7ZAS3 YybE n=1 Tax=Bacillus amyloliquefaciens FZB42 RepID=A7ZAS3_BACA2 Length = 296 Score = 247 bits (633), Expect = 3e-64, Method: Composition-based stats. Identities = 44/313 (14%), Positives = 102/313 (32%), Gaps = 24/313 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +D + + Q + Q + +T+AAK+++++ A+S+S++KL LF + Sbjct: 1 MDWHQINYFQTVAQVQHITQAAKQLSISQPALSRSISKLEDELGVQLFDRKGRNIYLNRY 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKP-HHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + ++ + + + P L+ L M M+ + YP Sbjct: 61 GKMFLHRVEQSIRQIEIGKQEVWNEIHPNSGTILLSFLPSLGMSMVPDVISSFQHMYPHV 120 Query: 127 TIKLRNWDYDS-LDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 +L ++ +T EVDI + + + L ++ + + Sbjct: 121 NFQLTQASNQQIIEQLTSREVDIALTSLRDEN----------DDVICQPLLTEELYLAVS 170 Query: 186 KDHPALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 +HP +L P IS + + ++ G + + + + Sbjct: 171 AEHPLASYDEIDLKMAEHEPFISFKDTNVLHGMIKELCEKAGFSPDVVFEGEDIVTASGL 230 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 L ++ P + ++ L+++ E L W K +P Sbjct: 231 VGAK--LGVSLIPDL--HVFDKTKVKLLSV-------TNPICEREIGLAWRKDGYLSPAA 279 Query: 305 VWLRETIKNLYAS 317 I+ Sbjct: 280 ENFIAFIQTRLNR 292 >UniRef50_P27111 HTH-type transcriptional regulator cynR n=108 Tax=cellular organisms RepID=CYNR_ECOLI Length = 299 Score = 247 bits (633), Expect = 3e-64, Method: Composition-based stats. Identities = 48/312 (15%), Positives = 97/312 (31%), Gaps = 24/312 (7%) Query: 11 NLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVS 70 + + + S T+AA ++V+ A+S+ + +L PLF S + T Sbjct: 4 RHINYFLAVAEHGSFTRAASALHVSQPALSQQIRQLEESLGVPLFDRSGRTIRLTDAGEV 63 Query: 71 MEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQIYQRYPQATIK 129 Q + +Q H +A + L Y RYP T++ Sbjct: 64 WRQYASRALQELGAGKRAIHDVADLTRGSLRIAVTPTFTSYFIGPLMADFYARYPSITLQ 123 Query: 130 LRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDH 188 L+ + D + R E+D+G + H ++ L ++ + + + H Sbjct: 124 LQEMSQEKIEDMLCRDELDVGIAFAPVHSP----------ELEAIPLLTESLALVVAQHH 173 Query: 189 PAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQ 247 P H+ L + + E + +D+ ++ G + + L + + Sbjct: 174 PLAVHEQVALSRLHDEKLVLLSAEFATREQIDHYCEKAGLHPQVVIEANSISAVLELIRR 233 Query: 248 PDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWL 307 L ++ L + L LE LL K + Sbjct: 234 TS-LSTLLPAAIATQHDGLKAISLAP----------PLLERTAVLLRRKNSWQTAAAKAF 282 Query: 308 RETIKNLYASMA 319 + A + Sbjct: 283 LHMALDKCAVVG 294 >UniRef50_C8WUA0 Transcriptional regulator, LysR family n=1 Tax=Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 RepID=C8WUA0_ALIAD Length = 298 Score = 247 bits (632), Expect = 4e-64, Method: Composition-based stats. Identities = 42/311 (13%), Positives = 102/311 (32%), Gaps = 26/311 (8%) Query: 9 DLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLM 68 +L L + +E +AAKR+ +T +S+ + KL LF + + T Sbjct: 4 ELRQLEYFVAVAEELHFGRAAKRLGLTQPPLSQQIQKLEDEIGVTLFDRTNRRVQLTHAG 63 Query: 69 VSMEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNALSKQIYQRYPQAT 127 + + + + + + +A L + + +R+P Sbjct: 64 RVLLEEARKVLAHVQTAVKAARDAAAGRVGRLSVAFVGSATYGWLPEVIRAYQERHPDVE 123 Query: 128 IKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRK 186 + LR ++A+T GE+D+G + + ++ D + Sbjct: 124 LVLREMSTPAQMEALTAGELDVGVLRLP----------AQHPDLHVRLVERDDCVAVVPS 173 Query: 187 DHPAL-HQTWNLDTFLRYPHISICW--EQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 +HP + L P + + + + LG E + + + E + ++ Sbjct: 174 EHPLATRSSLFLVELAEEPFVLVSRAIWPGLYDGFITLARALGFEPRVRLEVTEVQTAVG 233 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 + A L ++ P + + + + + V + W +R +P Sbjct: 234 LVAA--GLGVSIVPSATE--------RVHRRDVRYLHIDGQSPTVELGVAWRRR-DTSPL 282 Query: 304 IVWLRETIKNL 314 + +++ Sbjct: 283 VAAFLAMAESV 293 >UniRef50_Q0K6D4 Transcriptional regulator, LysR-family n=2 Tax=Cupriavidus RepID=Q0K6D4_RALEH Length = 301 Score = 247 bits (632), Expect = 4e-64, Method: Composition-based stats. Identities = 52/316 (16%), Positives = 100/316 (31%), Gaps = 22/316 (6%) Query: 7 TLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTP 66 + L L + QER T+AA++++++ S+VS + +L LF L T Sbjct: 2 NVSLRQLRAFIAVAQERHFTRAAEKLDLSQSSVSALIHELEGNLGLKLFDRHTRQLHITQ 61 Query: 67 LMVSMEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQIYQRYPQ 125 + + + + + +++ + ++A S +ML + ++ +P Sbjct: 62 AGAELLPLVKKAVADIDSVIENSSELRTLGRGRVSISASSIQAALMLPRVIREFCVSHPG 121 Query: 126 ATIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 ++L + + ++ GEVD G + L SD + + Sbjct: 122 VKVELHDVSEHEVTKMVSSGEVDFGIGTIPEGQP----------DLSAHRLMSDPFVIVM 171 Query: 185 RKDHPALHQ-TWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 HP + T + P I LD L G + + Sbjct: 172 PAHHPLRRRKTLRWEDVAGLPVIGPHKGNPIRDCLDTALAARGISLQRVHEVFLPLTMVG 231 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 M L +A L V + +LL H S +P Sbjct: 232 MVDA--GLGIAVMSAAVTRLTSALGLATV-------MPTDPVIHREISLLVHADRSLSPP 282 Query: 304 IVWLRETIKNLYASMA 319 R+ + A +A Sbjct: 283 AQAFRDLLMRYRAKLA 298 >UniRef50_Q475G5 Regulatory protein, LysR:LysR, substrate-binding n=9 Tax=Betaproteobacteria RepID=Q475G5_RALEJ Length = 304 Score = 247 bits (632), Expect = 4e-64, Method: Composition-based stats. Identities = 46/311 (14%), Positives = 96/311 (30%), Gaps = 23/311 (7%) Query: 7 TLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTP 66 L L + + ++AA + +T SA+S+ +A+L L + + T Sbjct: 2 NYTLRQLRVFLAVAETGGFSRAADAVGLTQSAISRGVAELEESLGVRLLDRTTREVVLTH 61 Query: 67 LMVSMEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQIYQRYPQ 125 ++ L + + L+ + +A + ++ +YP+ Sbjct: 62 AGQALAPALERLLGQLDDTLEDTRELGEHYRGRVVIAGAPTISARLMPMYVAACAAQYPE 121 Query: 126 ATIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 + +R+ D ++ + G VD G + + E L +D C Sbjct: 122 IRLTVRDNVQADGIEQVRAGGVDFGVLIDP----------LVHDGLTIEPLVTDPFCFVC 171 Query: 185 RKDHPALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 R+DHP +T + + + +D V G + L Sbjct: 172 RRDHPLAQEKTVPWSALDGMRLVLLDFASGSRPLIDRVFGRHGIVPRVVQELGHSASVFG 231 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 M + + P Y L L + E ++ + S +P Sbjct: 232 MVEA--GIGASVLPTYSLPLPAASPLVWRPL--------VPREERRIVMVRREDRSLSPA 281 Query: 304 IVWLRETIKNL 314 + ++NL Sbjct: 282 AEAVWALVRNL 292 >UniRef50_C6D0W9 Transcriptional regulator, LysR family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D0W9_PAESJ Length = 296 Score = 247 bits (631), Expect = 5e-64, Method: Composition-based stats. Identities = 33/313 (10%), Positives = 89/313 (28%), Gaps = 22/313 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +++ L Q + E T+AA ++ +T +S + +L PLF ++ T Sbjct: 1 MEIRQLEYFQAICDELHFTRAADKLGITQPTMSYQIKQLEEELGVPLFHRIGKKIALTEA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTP-RGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + + + ++ + + +++ L + +YP Sbjct: 61 GFILLNHSRNIFRSIDGAREEISELHHMERGSLTIGTLIGEINDLVSGLLVDFHNKYPGI 120 Query: 127 TIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRK 186 +IKL D +D + + E+D + L+ + Sbjct: 121 SIKLLAL-EDVVDPLLQDELDFAVTIFPVD----------DDRFSKVSLYEEEFYFVAHS 169 Query: 187 DHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMA 245 + P + ++ ++ P I +D V G + + L + Sbjct: 170 NSPLSGEPSVTIEEAMKEPIIMFPKTHRCRQLIDTVCSMHGVAWEPVIETSAIKSILSLV 229 Query: 246 AQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIV 305 + + + ++ L + + K + Sbjct: 230 QS--GAGASILSKTLLELYPDQNMIMIP-------ISNPSLRREVGIAYLKDRYIGKATI 280 Query: 306 WLRETIKNLYASM 318 + + + + Sbjct: 281 AFMKQLTTRFDGV 293 >UniRef50_C7PVI0 Transcriptional regulator, LysR family n=11 Tax=Actinomycetales RepID=C7PVI0_CATAD Length = 297 Score = 247 bits (631), Expect = 5e-64, Method: Composition-based stats. Identities = 45/310 (14%), Positives = 91/310 (29%), Gaps = 22/310 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 + + L + + R T+AA+ ++VT ++S+ + L LF+ + ++ T Sbjct: 1 MQFHQLRYFIAVAETRHFTRAAEALHVTQPSLSQQIRALEHELGADLFLRARGNITLTDA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 ++ + ++ + L A L +L + + ++RYP Sbjct: 61 GEALLPMARRILADADAARREVQELAELRRGHVRLGATPSLCTGLLPDVLRTYHRRYPGI 120 Query: 127 TIKLRN-WDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + ++ +D + + RG +D+ S A+ E L + V Sbjct: 121 QLLVQESGSHDLVRDLARGALDLALVVLPLPSPS--------PALTTEELLREDLVVVSA 172 Query: 186 KDHPAL--HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 + P + + I + G E A+ E + L Sbjct: 173 PNLPPPGDGRQVRIADLEHEQLIMFRHGYDLRDLTVAACRAQGFEPVFAIEGGEMDAVLG 232 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 A L +A P V L L L + Sbjct: 233 FARA--GLGVAIVPSMVAQN--------VDPSLRVTPIAPPALHRTIALAHRTDVALPRA 282 Query: 304 IVWLRETIKN 313 R T+ Sbjct: 283 AQEFRRTLLE 292 >UniRef50_UPI000178812A transcriptional regulator, LysR family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI000178812A Length = 312 Score = 246 bits (630), Expect = 7e-64, Method: Composition-based stats. Identities = 34/315 (10%), Positives = 101/315 (32%), Gaps = 22/315 (6%) Query: 7 TLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTP 66 +++ L + QE T+A++++ VT +S + + PLF ++ T Sbjct: 13 DMEIRQLEYFMAVCQELHFTRASEKLGVTQPTLSHQIKAIEDELGMPLFDRIGKKIAITE 72 Query: 67 LMVSMEQNLAEWMQMSNLLLDKPHHQTP-RGLKFELAAESPLMMIMLNALSKQIYQRYPQ 125 + ++ + ++ + + + + ++ L ++ Y + Sbjct: 73 AGFILLKHCHTVFHSFKSVREEIQELQDIKRGRLSVGVLPGELNALVCRLLPDFHEAYSE 132 Query: 126 ATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 +++ + D + + + E+D+ + H I ++L+ + + + Sbjct: 133 VQVRVISAD-NVAERLLNNEIDLALTIIPVH----------DERIVSQLLYKEKLYLVVN 181 Query: 186 KDHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 DHP +L+ P + LD++ + A+ + E + + Sbjct: 182 ADHPLAEGPEVSLEALKDLPLVLFPKNYRCRHQLDSICNLKEIDLRPAIEIDAIESMITL 241 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 + + + +V + L++HK + Sbjct: 242 IEA--GVGCSILSETLMKQWDKPGVKIV-------NIAENPFLRQVGLIYHKDKYRGQVV 292 Query: 305 VWLRETIKNLYASMA 319 + E + + + Sbjct: 293 LKFTELLHKQISQLG 307 >UniRef50_A4J1K6 Transcriptional regulator, LysR family n=1 Tax=Desulfotomaculum reducens MI-1 RepID=A4J1K6_DESRM Length = 308 Score = 246 bits (629), Expect = 8e-64, Method: Composition-based stats. Identities = 37/318 (11%), Positives = 98/318 (30%), Gaps = 26/318 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 L L + + ++S + AA+ + ++ AVS + L F LF + ++ T Sbjct: 3 LSLYQFHIFKTVADKKSFSGAAQALYISQPAVSMHIKALEDHFRTKLFDRNTQQVTITEA 62 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTP-RGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + + + + + + T + A + ++ + + +PQ Sbjct: 63 GRILYKYADKILNLIDQAENDISRFTGNIEGPLSIGASFTVGEYVIPKILGTFNKEHPQV 122 Query: 127 T--IKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 +++ ++ + + E+D+G + + + + D + + Sbjct: 123 RALLQVT-NTEQIVNLVLKQEIDLGLIENQVNKT----------ELVAKPFLQDELIIVI 171 Query: 185 RKDHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGR---ERTIAMSLPEFEQ 240 D+P +++ + P + + L E G I M L E Sbjct: 172 PPDYPLSEHQFISMEDLVALPLVMREQGSGTRKITEARLIEEGVDLNTLNIVMELGSTEA 231 Query: 241 SLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 ++ LV + + L F L++H+ Sbjct: 232 VKEAVEA--GFGTTIISKWAVQKELKLG-TLVPVRF-----KDISLFRKFYLIYHRDKFQ 283 Query: 301 NPKIVWLRETIKNLYASM 318 + + + + + Sbjct: 284 TTVVEEFITFLISFCSGI 301 >UniRef50_B9KYF2 RuBisCO operon transcriptional regulator n=1 Tax=Thermomicrobium roseum DSM 5159 RepID=B9KYF2_THERP Length = 299 Score = 245 bits (628), Expect = 1e-63, Method: Composition-based stats. Identities = 49/310 (15%), Positives = 97/310 (31%), Gaps = 21/310 (6%) Query: 7 TLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTP 66 + L L + + + RS ++AA+ + ++ AVS + L PLF + G+ T Sbjct: 2 DVSLRQLQVFRSVARHRSFSRAAEDLVISQPAVSAQIKSLEQVLGVPLFQRTGRGVELTE 61 Query: 67 LMVSMEQNLAEWMQMSNLLLDKPHHQT-PRGLKFELAAESPLMMIMLNALSKQIYQRYPQ 125 + + + + L H + + +AA + + ++ ++ YP Sbjct: 62 AGRQLLPYAERLLNLLDEALAAVHELRCAQRGQVRVAASTTAGIYVVPKALGAFHRAYPG 121 Query: 126 ATIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 + L + + G+ D+ G P ++ E + V Sbjct: 122 VELSLDVLNRFAVHQRLLAGDADVAIMGLIED----------PQDLEIEQFLPNELVVIA 171 Query: 185 RKDHPALHQ-TWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 H + LD R P + ++ + E G +AM L Sbjct: 172 SPRHHLARRHQIPLDEIAREPFLVREIGSGTRADMERIFAEAGLSPRVAMELRSNGAIKQ 231 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 A L +A PR L L L + Q + ++L+ + Sbjct: 232 AVAAD--LGVAVMPRDAI------GLELETGRLIVLDVQGFPVRRWWSLVRRAGRQPSAA 283 Query: 304 IVWLRETIKN 313 L + Sbjct: 284 ADALWNFLLQ 293 >UniRef50_B8FPA0 Transcriptional regulator, LysR family n=4 Tax=Clostridiales RepID=B8FPA0_DESHD Length = 295 Score = 245 bits (628), Expect = 1e-63, Method: Composition-based stats. Identities = 45/311 (14%), Positives = 91/311 (29%), Gaps = 22/311 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +++ L + +++S +KAA++ +VT S +SK + L LF + + T Sbjct: 1 MEIKHLEYFVEVARQKSFSKAAEKCHVTQSTISKLIKDLEGELGTSLFNRTSKYVQLTDT 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPH-HQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 E + L + K + + L + ++YPQ Sbjct: 61 GAIFLDQALEIVTKFENLTHEFQNRIKLERGKIAIGLLPITGTTLFAELLGEFKKKYPQI 120 Query: 127 TIKLRN-WDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 I L + I G +D+G + + D V + Sbjct: 121 EISLSERGSKKVIMDILDGTLDVGVVCSVPDSQY----------FESFAFAEDPLYVIVS 170 Query: 186 KDHPALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 +P + +L + P + E S + + + G I +FE M Sbjct: 171 VRNPISKLASIDLKSLADEPFVLYSSEFSLHDEIISKCKNEGFAPNIIFETSQFELMTQM 230 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 A L +A P ++ ++W + S + Sbjct: 231 VAAD--LGIAFLPGAACREMD-------PRRFAVIPVTNPQIIHQMFIIWKRGRSMSHAA 281 Query: 305 VWLRETIKNLY 315 + + Sbjct: 282 NLWLQFAARFF 292 >UniRef50_Q67SW7 LysR family transcriptional regulator n=1 Tax=Symbiobacterium thermophilum RepID=Q67SW7_SYMTH Length = 305 Score = 245 bits (627), Expect = 1e-63, Method: Composition-based stats. Identities = 43/312 (13%), Positives = 89/312 (28%), Gaps = 19/312 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +D+ L + + S +AA+R+ +T +V+ + L LF P G+ T Sbjct: 1 MDVQGLEAFWWIAKTGSFNRAAERLFLTQPSVTARIQALEKELGQQLFERRPRGVRLTDA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNALSKQIYQRYPQA 126 ++ + +Q + + +L + + + YP Sbjct: 61 GRALLPHAERVLQDIKRARQAVLDLQTASGGTLSVGSALTTSAYLLPDILLRFKRGYPNV 120 Query: 127 TIKLRNWDYDSLDAI-TRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + + + + V +G I L + + + Sbjct: 121 EVLVHTGRSHQVQQLVLDDTVQVGLVHAPLPS---------HAEIVSYPLSEEPILLVVP 171 Query: 186 KDHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 DHP + LD + I+ ++ G I M L E + M Sbjct: 172 PDHPVARHSEVTLDELTQESFITTDRASGYWALVEQWWASQGFVPHITMELDSIEAAKRM 231 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 L L P +VA+PL L+ L+ + + Sbjct: 232 VLC--GLGLTMLPYSTVKSEIELS-QVVAVPLA----NSATLKRQNILIHRRGKIWSGTA 284 Query: 305 VWLRETIKNLYA 316 ++ ++ Sbjct: 285 KAFLRVLEEMFQ 296 >UniRef50_A0JW92 Transcriptional regulator, LysR family n=3 Tax=Micrococcaceae RepID=A0JW92_ARTS2 Length = 306 Score = 245 bits (627), Expect = 2e-63, Method: Composition-based stats. Identities = 39/307 (12%), Positives = 86/307 (28%), Gaps = 26/307 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++ L + +ER +AA R+++ +S+ + +L PL V + + TP Sbjct: 1 METRHLKYFIAVAEERHFGRAAARLHMAQPPLSQQIRQLEEQLGTPLMVRTTRKVELTPA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQ-TPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + +Q +L + ++ + + + P Sbjct: 61 GQVLLDRGRVLLQELQVLESDVQQVGEGATGVLRVGFTGTATYRLMPIIVQAARRTLPGL 120 Query: 127 TIKLRN--WDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 I ++ A+ G +D H + I ++L D L Sbjct: 121 RITVQGEMLTPQMEAALEEGRLDAAVLRPPVHSGA----------IALKLLEQDQLVAAL 170 Query: 185 RKDHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 D P T L I + + + ++ G + + E L Sbjct: 171 PADSPLAEKGTLELAALSEEGFIGYPGYSAVSSIFVDACRKAGFQPRVVQEAKETSTLLS 230 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 + A + +A P + L + + + W+ P Sbjct: 231 LVAS--GMGIALVP-MTSRMFSYQGVAFRPL--------RNPPPMDLAVAWNSDKE-TPL 278 Query: 304 IVWLRET 310 + + Sbjct: 279 LRAFLDL 285 >UniRef50_A0L4T1 Transcriptional regulator, LysR family n=2 Tax=Proteobacteria RepID=A0L4T1_MAGSM Length = 307 Score = 245 bits (627), Expect = 2e-63, Method: Composition-based stats. Identities = 40/312 (12%), Positives = 89/312 (28%), Gaps = 24/312 (7%) Query: 13 LLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSME 72 L + + S T+AA+ + +T AV+ + +L FD LF +S T + + Sbjct: 8 LRVFYAVAKHLSFTRAAEELYLTQPAVTFQIRQLEEHFDTRLFDRHHNRISLTEAGLEVY 67 Query: 73 QNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQIYQRYPQATIKL- 130 + + T ++ A + + +L + ++ I+L Sbjct: 68 SYAERILDLYRETEKAVSELTGVTRGVVKVGASTTIGEYLLPRILSDYRDQFNDVQIRLS 127 Query: 131 RNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPA 190 + + + +D+G ++ D V L +HP Sbjct: 128 IDNTRTVVRKLEDATIDVGMIEGPVKNKNIARDGC----------LDDELVVILPPNHPL 177 Query: 191 LH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGR---ERTIAMSLPEFEQSLFMAA 246 + YP +S + + L G + I + L E Sbjct: 178 CDLDEIPVKELKAYPFVSREEGSGTRQVVHDHLLHAGLPYDQLDIVLELGSTEAVKGSVE 237 Query: 247 QPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVW 306 + + ++ + L Q ++ + K+ + + Sbjct: 238 GGIGIGIVSSASLIKELKLGI--------LVAKRVQGMRITRTINFIHQKQKFRSKAVEA 289 Query: 307 LRETIKNLYASM 318 K+ M Sbjct: 290 FINFAKDHCKHM 301 >UniRef50_B9XBB1 Transcriptional regulator, LysR family n=2 Tax=Verrucomicrobiales RepID=B9XBB1_9BACT Length = 299 Score = 245 bits (627), Expect = 2e-63, Method: Composition-based stats. Identities = 37/308 (12%), Positives = 88/308 (28%), Gaps = 26/308 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L + + +E S +AA+R+++ +S + L LF + + T Sbjct: 1 MELRHIRYFVAVAEELSFRRAAERLHLAQPPLSAQIKDLEGELGTKLFERTTRSVRLTAS 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPH-HQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + + + + +P L + + ++P Sbjct: 61 GRVFLDEARAVLAAAEKAEQRVRKAEHGLVGTLRIGVLAPTATSRLATILRSYRNQFPGV 120 Query: 127 TIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 L + L ++ ++D+G +D+ L + + Sbjct: 121 QFSLHEMTSVEQLQSLRLDQLDVGLLRPPVAFP----------ELDFHFLEESPMVLAVP 170 Query: 186 KDHPALHQT-WNLDTFLRYPHISICWE--QSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 H Q F P + I N+ + G + + + Sbjct: 171 AGHRLAKQRLIEWKDFHNEPMVMIHPSLQHGYYDTFLNLCAKAGSTPIVGQYANDVHSKM 230 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 ++ + + T + L LP Q ++W KR +++P Sbjct: 231 WLISAGFGVAPTT---KTIAEVKRPGLVFRELPPGLPLVQTL-------IVW-KRTNNSP 279 Query: 303 KIVWLRET 310 + E Sbjct: 280 MVGNFIEC 287 >UniRef50_C1F7X5 Transcriptional regulator, LysR family n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F7X5_ACIC5 Length = 305 Score = 245 bits (626), Expect = 2e-63, Method: Composition-based stats. Identities = 47/311 (15%), Positives = 110/311 (35%), Gaps = 22/311 (7%) Query: 9 DLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLM 68 +L + + Q + T+AA+ ++V+ SA++ + +L LF + ++ T Sbjct: 4 ELRHIRAFLAVAQHANFTRAAQELHVSQSALTVQIQQLEEALGVKLFDRNKRRVALTDAG 63 Query: 69 VSMEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQIYQRYPQAT 127 + L + + ++ + T +A + +L+ + +P Sbjct: 64 REVIAPLQRIVVDAEAIVSRTREITGLRRGVLSMAVLPSMASGILSTALSRFTAAHPGIM 123 Query: 128 IKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRK 186 I + + D + + + + EVD G + + + LF+D +L + Sbjct: 124 IHIHDVVADQVIEKVKKEEVDFGVA----------TVMHADKELTLMPLFTDRLFAFLPE 173 Query: 187 DHPA-LHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMA 245 HP + +L YP + + S +D L++ G T A +L + Sbjct: 174 QHPLSSRASVSLQQISDYPLVLMARGTSVRSMVDQALRDHGLTATAAYEANYMSTALSLV 233 Query: 246 AQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIV 305 + + P L + + +L P +L K S +P + Sbjct: 234 RAGFGIGI--LPEDAGTMGSAQNLVALP-------IVRPQLTRPIHVLMRKGRSASPAVQ 284 Query: 306 WLRETIKNLYA 316 + + ++++ Sbjct: 285 QMLQILRDITR 295 >UniRef50_Q3M2K4 Transcriptional regulator, LysR family n=5 Tax=Cyanobacteria RepID=Q3M2K4_ANAVT Length = 298 Score = 244 bits (625), Expect = 3e-63, Method: Composition-based stats. Identities = 35/317 (11%), Positives = 102/317 (32%), Gaps = 27/317 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVN-SPLGLSPTP 66 ++L L + +E +KAA+R+++ +S+ + +L A LF + + T Sbjct: 1 MELRHLRYFIAVAEELHFSKAAERLHIAQPPLSQQIQQLEAELGVELFQRKTKRQVQLTE 60 Query: 67 LMVSMEQNLAEWMQMSNLLLDKPHH-QTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQ 125 Q + + +D + + S + +L + +Q +++ + Sbjct: 61 AGQVFLQEAYQLFAQLSKAIDLTQRTGRGEKGQLRVGFTSLVTYDLLPVILRQFREQFLE 120 Query: 126 ATIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 + L+ A+ + +GF+ + + E + + V + Sbjct: 121 VELVLQELTTTQQEQALFDRRIHVGFAHPPLEDNT----------FNQECIHQEGLIVAM 170 Query: 185 RKDHPALHQT-WNLDTFLRYPHISICW--EQSDTWALDNVLQELGRERTIAMSLPEFEQS 241 H Q ++ I + ++ Q+ + + + + Sbjct: 171 LVTHFLARQENISVRELKDENFIMFPRYLGPGLYDQILSLCQQGNFSPKVTIEAIQMQTI 230 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 + + + +A P Q + + + +K V ++W + Sbjct: 231 IGLV--SGGMGIAIVPSSLQNLQRAG--------VVYRTLDEKTPLVETAVVWRQE-DMT 279 Query: 302 PKIVWLRETIKNLYASM 318 P + + ++++ + Sbjct: 280 PVLREFLQIVRSVCVEL 296 >UniRef50_D1WWA8 Transcriptional regulator, LysR family n=7 Tax=Streptomyces RepID=D1WWA8_9ACTO Length = 310 Score = 244 bits (624), Expect = 3e-63, Method: Composition-based stats. Identities = 40/298 (13%), Positives = 88/298 (29%), Gaps = 26/298 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L + +E +AA+R+ + +S+ + +L LF + + T Sbjct: 1 MELRHLRAFLAVAEELHFGRAARRLQMAQPPLSQRIRQLEKELGVQLFHRNTRSVRLTGA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQ-TPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + + + + + + L L++ + +P Sbjct: 61 GETFLDPVRTVLDDLDTAVRAARSAGRGEYGRVTIGFAGASSHETLPRLTRAVRAAHPGL 120 Query: 127 TIKLRNWDYD--SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 + + Y +L + G +D+GF +++ V+ + L Sbjct: 121 ELVMTGQTYANVALSRVADGSLDLGFVRLPVSRP----------GVEHRVIDEEELLCAL 170 Query: 185 RKDHPALH-QTWNLDTFLRYPHISICW--EQSDTWALDNVLQELGRERTIAMSLPEFEQS 241 DHP + +L P +S + AL + G + P+ Sbjct: 171 PSDHPLARHEAVSLADLADEPFVSFPANTGSTVRDALTEACESAGFTPRVVQEAPDSYTI 230 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 + + A + L + Q L L + L W N Sbjct: 231 MALVAAGVGVTLTV---TSVRHIQQSGLVYRPL-------TGPPIRRQAALAWRADNP 278 >UniRef50_C9KJX6 Transcriptional regulator, LysR family n=2 Tax=Veillonellaceae RepID=C9KJX6_9FIRM Length = 302 Score = 244 bits (624), Expect = 3e-63, Method: Composition-based stats. Identities = 41/312 (13%), Positives = 94/312 (30%), Gaps = 25/312 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L Q+ + R++T+AA+R+ V+ ++ ++ KL A LF S L+ TP Sbjct: 1 MELRQLEYFQMASRLRNITRAAERLRVSQPNITVAIKKLEAELGIQLFDRSQKQLALTPE 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + ++ + + + ++ + + + +RY Sbjct: 61 GAVFLNRVELALRNIQDAVLEVNDYKQLQKGTIKIGVPPMMGAYLFPRIFSSFQRRYSHL 120 Query: 127 TIKLR-NWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 I + + + E+D G +LL I + Sbjct: 121 DIFMHEEASMSIREQLEHDELDFGIIILSGASNRLQLLPMSKNQI----------VCCVP 170 Query: 186 KDHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 P + +++ + + + +++ G I + + + Sbjct: 171 ASSPLAKKKAISMNDVADTKIVMLKEGSFLRQTILGRMKDEGITPNIVLESNQINTLKGL 230 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 A + + + L LPL + V L W K + Sbjct: 231 VA--NGVGITFRLDMVADEMPG----LKTLPLADP------IFVDVGLAWKKDRYISKAA 278 Query: 305 VWLRETIKNLYA 316 + K+L Sbjct: 279 QSFIDFCKDLLK 290 >UniRef50_A0QNN2 Transcriptional regulator, LysR family protein n=3 Tax=Corynebacterineae RepID=A0QNN2_MYCS2 Length = 293 Score = 244 bits (624), Expect = 3e-63, Method: Composition-based stats. Identities = 41/310 (13%), Positives = 85/310 (27%), Gaps = 25/310 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 + L+ L +L + VT AA + ++ +S++LA+L PLF L Sbjct: 1 MHLDELSWFVVLAETEHVTDAAAELGISQPTLSRALARLEDEVGVPLFDRVNRRLQLNAY 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQ-TPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + ++ + ++ P LA + L ++ P Sbjct: 61 GEILLEHARRTITEMRSATERIAAMRDPDTGLVRLAFLHSQAGSFVPDLLRRFRAHAPHV 120 Query: 127 TIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 L D L+ + G+VD+ + P + L+ + C+ + Sbjct: 121 QFSLTQGAAHDLLERLAGGQVDLAITSPR------------PEGFQWRGLYVERLCLAVP 168 Query: 186 KDHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 + H L P + + + + E G + E + Sbjct: 169 RGHRLASRSRITLADAGDEPFVGLAPGFGLRQLTEELCAEAGITPHVVFEATEIPTMEGL 228 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 A + + P + + Q + L W P Sbjct: 229 VAAGFGVAVVPVPHAGRAEPGA----------EYIALAQASAKRQLGLAWPADRPLPPAA 278 Query: 305 VWLRETIKNL 314 + + Sbjct: 279 ERFAQFVIRT 288 >UniRef50_Q5WCI6 LysR family transcriptional activator of glutamate synthase n=6 Tax=Bacillales RepID=Q5WCI6_BACSK Length = 301 Score = 244 bits (624), Expect = 4e-63, Method: Composition-based stats. Identities = 48/314 (15%), Positives = 103/314 (32%), Gaps = 21/314 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +++ LL + + VT+AA ++V SAVS+ + L + LF+ + TP+ Sbjct: 1 MEIRQLLYFMEVAKREHVTEAAAALHVAQSAVSRQIFNLESELGVDLFIREGRRVKLTPI 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHH-QTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + M + + + P+ +A L L ++YP+A Sbjct: 61 GKIFLERIKHAMNVIDDAKREVQEYLDPKKGTIRVAFPISLAAYTLPTAIYAFRKQYPEA 120 Query: 127 TIKLRNWD-YDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 +L+ + +D + +G+ ++ G + +LF++ L Sbjct: 121 KFQLKQGLYRELIDGVIKGDYNMALIGPVPMEEKKITP---------RILFAERIVALLP 171 Query: 186 KDHPALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 HP NL P + + + N E+G IA + + + Sbjct: 172 IHHPLAKSAEINLLDLKNDPFVLLPEGFVFRDLVINACSEIGFVPQIAFEGDDIDALKGL 231 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 + L + P V +PL + + ++ P Sbjct: 232 VSA--GLGVTLMPEV--TLVDNTPRSTVKIPL-----SEPNVTRTVGVITPTERGLLPTE 282 Query: 305 VWLRETIKNLYASM 318 E ++ + + Sbjct: 283 ELFYEFLQEFFTKL 296 >UniRef50_A7ZAT2 Putative HTH-type transcriptional regulator n=2 Tax=Bacteria RepID=A7ZAT2_BACA2 Length = 302 Score = 244 bits (624), Expect = 4e-63, Method: Composition-based stats. Identities = 39/307 (12%), Positives = 95/307 (30%), Gaps = 22/307 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +D+ + + + S TKA++ ++++ A+SK + L L S ++ T Sbjct: 1 MDIRQITYFLEVAKSNSFTKASENLHLSQPALSKMVKSLEEELKVELIDRSARQIALTDA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + M+ + L + K ++ + ++ + + Q YP Sbjct: 61 GEIVFEQGQMIMKSIDDLSTNLYDLLHLKKGKVKIGIPPLIGVLFFPKIIRGFKQLYPDV 120 Query: 127 TIKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 IKL + + + G +D+G D L ++ +++ Sbjct: 121 NIKLIEHGGNKVKQEVEDGVLDLGVVIEPVDEEQ----------FDIIPLLNEELMLFVH 170 Query: 186 KDHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 HP +H+ + P I + S + G I +++ M Sbjct: 171 SAHPLVHKEIVEMQDLKNEPFILFSEDFSLHDRIIQECIRAGFRPNIVYESSQWDFISEM 230 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 + L ++ P+ + + + ++ K + + Sbjct: 231 I--GEELGISIFPQSIVKKTDQSLVKAI-------SIVNPSIPWKVAIILKKGKYVSHAV 281 Query: 305 VWLRETI 311 I Sbjct: 282 REFIRYI 288 >UniRef50_B9Z480 Transcriptional regulator, LysR family n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z480_9NEIS Length = 303 Score = 243 bits (623), Expect = 4e-63, Method: Composition-based stats. Identities = 74/313 (23%), Positives = 120/313 (38%), Gaps = 20/313 (6%) Query: 9 DLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLM 68 D+ LL + + RSVT+AA + + AVS +LAKLR FDDPLFV G+ PTP+ Sbjct: 5 DVRLLQVFDEIYKTRSVTRAADNLGLGQPAVSIALAKLREHFDDPLFVRIANGMEPTPMA 64 Query: 69 VSMEQNLAEWMQMSNLLLDKP--HHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 +E + + + +L+ F ++ +++L L Q+ + P Sbjct: 65 RELEHAVRQALDALDLVFGHRIDFDPASSERTFCISMTDISQLVLLPKLWAQLRKTSPGV 124 Query: 127 TIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRK 186 I + ++ + GE D+ L + LF Sbjct: 125 HIDIVPLSAETPRMLETGEADLALGFMP----------QLEAGFYQQSLFRQRYVCVAST 174 Query: 187 DHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAA 246 DHP +H L F H + + LD + G R IA+ +P + F+ Sbjct: 175 DHPRIHDELTLAQFETEEHAVVTSSGTGHLILDREIARQGITRHIALRVPNYLGIAFVVE 234 Query: 247 QPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVW 306 Q D L + R Q + + +P + WH+R H+P W Sbjct: 235 QTDML-VTIPERLAQVLEGRGRFRVFPVPFELPDYA-------VKQHWHERYHHDPGNRW 286 Query: 307 LRETIKNLYASMA 319 LR I +L ++ A Sbjct: 287 LRRVISDLLSAPA 299 >UniRef50_C3AN59 Transcriptional regulator, LysR n=4 Tax=Bacilli RepID=C3AN59_BACMY Length = 314 Score = 243 bits (623), Expect = 5e-63, Method: Composition-based stats. Identities = 36/309 (11%), Positives = 97/309 (31%), Gaps = 26/309 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +D+ L ++ +ER +T+AA R+++ +S+ L+ L LF + + T Sbjct: 25 MDIRQLRYFIVIAEERQLTRAAHRLHMAQPPLSRQLSLLEQELSVSLFERNGRNMHLTEE 84 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHH-QTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + +Q + + + A + L+ + + YP Sbjct: 85 GKILYRKAKSIIQQLEETITEIKDTGEGLRGNLSIGAFHSCIP-FLSEKIRYFQENYPNV 143 Query: 127 TIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 +K+ ++ + +++ + ++ + + + + Sbjct: 144 NLKVWEGGPLYLIEQLENRNIELAVLRTPFNKKA----------FSSICVSKEPFVLVMP 193 Query: 186 KDHPALHQ--TWNLDTFLRYPHISICWE--QSDTWALDNVLQELGRERTIAMSLPEFEQS 241 H ++ P + + + S + + G + IA P+ Sbjct: 194 AKWELHHSNLPISITKLDHIPLLLLHKDKEDSYHQLVIDECSRHGIKLNIACECPDSAFV 253 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 L + + + P+ Y + +V L + F + +++W K + Sbjct: 254 LMLIMA--GIGASILPKSAVSYIPQEFIRIVDL-IDFPFQSES------SIIWLKDRKLS 304 Query: 302 PKIVWLRET 310 E Sbjct: 305 NSARRFIEC 313 >UniRef50_D1BNW2 Transcriptional regulator, LysR family n=4 Tax=Veillonellaceae RepID=D1BNW2_VEIPT Length = 307 Score = 243 bits (623), Expect = 5e-63, Method: Composition-based stats. Identities = 43/310 (13%), Positives = 98/310 (31%), Gaps = 24/310 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +D + L + ++S +KAA+ ++++ SA+S+++ L LF+ + + T Sbjct: 1 MDFHHLKYFVEVADQKSFSKAARNLHISQSAISRTIKALEDELGVVLFMRNAKSVELTDG 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPH-HQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + M L + + L + + YPQ Sbjct: 61 GTIFLTHAKRVVFMFEHLKTDFENEFRLEQGSIRIGIPPITDAPIFAQLLGEFKKVYPQI 120 Query: 127 TIKLRNWDYDSLD-AITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 ++L ++ ++ G +DIG P + L SD V + Sbjct: 121 ELELYEQGSKKVEISVQEGLIDIGII----------CTKPNPKEFESFYLTSDPLSVIIP 170 Query: 186 KDHPALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 K P + L+ + + + + + G + I + + L Sbjct: 171 KSSPLAKEKEIRLEMLADESFVLHKDDFNLHDEIIKACKHTGFQPHIVFETSQRDLMLQT 230 Query: 245 AAQPDNLLLATAPRYCQYYNQLH---QLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 + L +A P + +V PL ++ ++W K + + Sbjct: 231 VSAN--LAIALLPSRLCPEVGENTEVGSKVVVRPLV------PEIIHTLYVIWKKGHYLS 282 Query: 302 PKIVWLRETI 311 + + Sbjct: 283 HASRLWLDFV 292 >UniRef50_A6VV39 Transcriptional regulator, LysR family n=6 Tax=Gammaproteobacteria RepID=A6VV39_MARMS Length = 295 Score = 243 bits (623), Expect = 5e-63, Method: Composition-based stats. Identities = 44/312 (14%), Positives = 95/312 (30%), Gaps = 25/312 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +D+ L + + S TKAA+++ V AVS ++ KL A L + + T Sbjct: 1 MDIKPLRYFIAIAKTESFTKAAQQLGVAQPAVSMAIKKLEADLGLTLIHRADRNIGLTDE 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + + +Q ++ L + + + S L + +YP Sbjct: 61 GKKLLIHAEKIIQATDDALLEMSELKGLSQGEVRVGIPSMLGSYYFPPILMAFRHKYPTI 120 Query: 127 TIKLRNWDYDSLD-AITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 T+K+ L + GE+D+ + +LP ++ + L + V + Sbjct: 121 TLKVIEGGTWQLQKMLENGELDLSVI----------VAETLPDGLETQALIREEMLVTIA 170 Query: 186 KDHPALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 DHP + + + F + +D + + + I + Sbjct: 171 TDHPFSQLEKISPEAFFDEELVMFKEGYFHRRIVDKLAKACKKTPKIGFETNLIPLIKSI 230 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 Q ++T + P+ + W K + + Sbjct: 231 TQQ--GFGISTLLAMVIEEDDDLITRSFDPPIWL----------DLGIAWRKDSYLSKAN 278 Query: 305 VWLRETIKNLYA 316 E + Sbjct: 279 RAFLEFVNEHGR 290 >UniRef50_C1PEC2 Transcriptional regulator, LysR family n=1 Tax=Bacillus coagulans 36D1 RepID=C1PEC2_BACCO Length = 304 Score = 243 bits (623), Expect = 5e-63, Method: Composition-based stats. Identities = 51/317 (16%), Positives = 107/317 (33%), Gaps = 21/317 (6%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 + ++L L+ + + VT AA ++V SA+S+ ++ L A LF + Sbjct: 1 MIRMELRQLIYFIEVAKREHVTHAADELHVAQSAISRQISLLEAELGVSLFWREGRNVRL 60 Query: 65 TPLMVSMEQNLAEWMQMSNLLLDKPHHQ-TPRGLKFELAAESPLMMIMLNALSKQIYQRY 123 TP+ ++ + + + + H P L + L + ++L Q +++ Sbjct: 61 TPIGKVFLEHAEKVVLEIDKAKQRMHEFLDPDNGTVRLGFSTGLSVQTFSSLLAQFREKH 120 Query: 124 PQATIKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCV 182 P + + I GE+++ + A+ E+L+ + + Sbjct: 121 PGLEYQFVQGTPSYLIRLIENGELELALASPVPDD---------HPAVSGEILYMEKLML 171 Query: 183 WLRKDHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQS 241 R+DHP Q L I+ S L ++ G E IA + E Sbjct: 172 LFRRDHPLSGQKMIRLAQLKNERFITFREGFSIREILFAACRKSGFEPAIAFEGEDMETI 231 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 + A + + P ++ + E +L P ++ K+ Sbjct: 232 KGLVASGTGVAILPEPALLFNLSEE---------IVKAEISDMELMRPVGVMIPKKREMA 282 Query: 302 PKIVWLRETIKNLYASM 318 L + + Y + Sbjct: 283 ASEKALYTFLTSFYDRL 299 >UniRef50_UPI0001744D79 transcriptional regulator, LysR family protein n=1 Tax=Verrucomicrobium spinosum DSM 4136 RepID=UPI0001744D79 Length = 300 Score = 243 bits (622), Expect = 5e-63, Method: Composition-based stats. Identities = 46/309 (14%), Positives = 99/309 (32%), Gaps = 23/309 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++ L +++++S + A K + +T +SK++ +L LF T Sbjct: 1 MESRALAVFAEVVRQKSFSAAGKILGLTQPTISKAVQQLEHDCGCLLFDRQGKKFRLTAA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + Q ++ L D+ + L S ++ +++P Sbjct: 61 GEVVYQRAQVILKEHERLRDELAGIHGLERGRLRLGLPSLGSSLLFAPHVASFRRQHPGI 120 Query: 127 TIKLRN-WDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 I+L + + GE+++G S P D++ + + L Sbjct: 121 EIELHEQGSLHLQERVRAGEIEVGVSLGPV-----------PEEFDWQPVSDEPLVALLP 169 Query: 186 KDHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 HP +T L P + S + + ++ G A + + + Sbjct: 170 AGHPLERETSLELADLKDTPFVLFEPGFSLNAVILDACRQRGFSPVEAARSGHVDFIIAL 229 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 A L +A PR + +V L + + L L+W + +P Sbjct: 230 VAA--GLGVALLPRLIVNSREQRVCTVVPL-------RDEDLRWRLGLIWRRGGDLSPAA 280 Query: 305 VWLRETIKN 313 E ++ Sbjct: 281 RRWLEVVQE 289 >UniRef50_Q1AYT0 Transcriptional regulator, LysR family n=1 Tax=Rubrobacter xylanophilus DSM 9941 RepID=Q1AYT0_RUBXD Length = 293 Score = 243 bits (622), Expect = 6e-63, Method: Composition-based stats. Identities = 47/314 (14%), Positives = 104/314 (33%), Gaps = 26/314 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L+ + +E +AA+R++VT ++SK +A L LF + + T Sbjct: 1 MELSHIRYFVAAAEELHFGRAARRLHVTQPSLSKRVAGLERELGVRLFHRTRREVRLTEA 60 Query: 68 MVSMEQNLAEWMQM-SNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + ++ + + E+ SP + +L + K+ ++R+P+ Sbjct: 61 GEIFLEGARRVLEDALRAAEEARKAGRGELGRLEIGFFSPAIYGVLPEILKEYHERFPEV 120 Query: 127 TIKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + L W L+ + G+++IGF E +F + L Sbjct: 121 RVTLHEWTSSVQLERMREGKIEIGFMRAPVEEA----------GFVTEHVFVEPVVAALP 170 Query: 186 KDHPALHQT-WNLDTFLRYPHISICWE--QSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 + HP + + P I + + ++ Q G I + E + Sbjct: 171 EGHPQARREVVSPRELADEPFIMVPRSKEPNSFDRYVSICQRAGFSPKITQEVFEIHAIV 230 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 + A + +A + + L P + + + +P Sbjct: 231 GLVAT--GMGVAFVQGSVANL-KRPGVVYRPLDDPEARIGT--------AIVRRSSRPSP 279 Query: 303 KIVWLRETIKNLYA 316 + ET++ A Sbjct: 280 VLRTFLETLQAFVA 293 >UniRef50_B9Y467 Putative uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y467_9FIRM Length = 309 Score = 243 bits (622), Expect = 6e-63, Method: Composition-based stats. Identities = 41/308 (13%), Positives = 94/308 (30%), Gaps = 21/308 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 + L L + + S+TKAA+ ++++ AVS ++ +L ++ LF L T Sbjct: 1 MTLRHLRIFVEVCRTGSITKAAESLHLSQPAVSLAIRQLEDYYGILLFDRISKKLYLTES 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQAT 127 M + ++ + + + + + + ML L ++ R+PQ Sbjct: 61 GNKMLSYASHIIESFDDMETQLKNWDSA-GTLRIGSSISTGTQMLPQLVRRFNLRFPQIR 119 Query: 128 IKLRNWDYDSLDA-ITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRK 186 ++ + ++ + ++D+ S I ++D V Sbjct: 120 TQVLIDNSRIIEDKVLTNQLDLALVESL----------SYSPDIVCVPFYTDRLIVITAP 169 Query: 187 DHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMA 245 HP + YP + +D +L + T + Sbjct: 170 KHPLTQNPECTVKALADYPVLLREPGSGTREVVDALLVTAEVQITPLWESTSTRSIINAV 229 Query: 246 AQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIV 305 + + ++ P + LPL +++ H+ P Sbjct: 230 KEN--IGISILPYELVKNEIQSG-AVAGLPLASP-----LPNRTCSIIHHRNKYLTPSAQ 281 Query: 306 WLRETIKN 313 E + Sbjct: 282 AFIEVCQE 289 >UniRef50_Q7WCW0 Probable LysR-family transcriptional regulator n=3 Tax=Bordetella RepID=Q7WCW0_BORBR Length = 305 Score = 243 bits (622), Expect = 6e-63, Method: Composition-based stats. Identities = 51/313 (16%), Positives = 108/313 (34%), Gaps = 24/313 (7%) Query: 7 TLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTP 66 + L + RS ++AA+ ++VT A++ + KL A LF + G T Sbjct: 2 NVTFRQLTAFIEVASSRSFSQAAQALHVTQPALTAMIQKLEAQLGVVLFTRTRRGAELTT 61 Query: 67 LMVSMEQNLAEWMQMSNLLLDKPH-HQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQ 125 + L + ++++ +PRG LA L + +L ++ Q YP+ Sbjct: 62 TGRELLPELQRILANLEVVIEDVRGAASPRGGTVTLACIPSLSNTWIPSLIARVEQAYPR 121 Query: 126 ATIKLRNW---DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCV 182 + L++ + + + G++D G +++++L D Sbjct: 122 IKVILKDAMTENRSIHEMLRTGDIDYGVGSPSVEQ----------DGLEFDLLAHDELVA 171 Query: 183 WLRKDHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQS 241 + +DHP +T P I + ++ +D G + + + Sbjct: 172 VVPQDHPLARRTLVRWSELAESPLIGMSYQSHVRMLVDEAFAANGISKRPKREVSLITTA 231 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 + M L ++ P + L ++ L ++ P L S + Sbjct: 232 IGMVRA--GLGVSVLPTTAIEVCNVAGLKVLRL-------HAPRVRRPLGFLHLPTRSLS 282 Query: 302 PKIVWLRETIKNL 314 P L +K+ Sbjct: 283 PAARLLLRFVKDA 295 >UniRef50_Q31FC6 Transcriptional regulator, LysR family n=7 Tax=Proteobacteria RepID=Q31FC6_THICR Length = 318 Score = 243 bits (622), Expect = 6e-63, Method: Composition-based stats. Identities = 53/315 (16%), Positives = 105/315 (33%), Gaps = 25/315 (7%) Query: 11 NLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVS 70 L + + S TKAA+ +++T AV+ + +L +F+ LF + ++ T Sbjct: 4 RRLQVFYTVAKVLSFTKAAETLHMTQPAVTFQVKQLEEFFNTRLFDRTHNKITLTDAGKI 63 Query: 71 MEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQIYQRYPQATIK 129 + + + + + T + A + + ML +L +++ I+ Sbjct: 64 VYDYAEKILDHYEKMNSEVRELTGEVTGSLLIGASTTIAEYMLPSLLGAFKKQFEDVNIR 123 Query: 130 LRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDH 188 L+ + D + + +D+G ++ EV D + + H Sbjct: 124 LQVGNTDAIVAMVENNMIDLGVVEAPV----------YNKNLEVEVCRLDEMVLIVPHGH 173 Query: 189 PAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRE---RTIAMSLPEFEQSLFM 244 P +++ +Y +IS +DN ++E G + M L E Sbjct: 174 PLSNRDKISIEDMRKYRYISREEGSGSRSVIDNYIREQGLSYSDLNVVMELGSPEAVKMA 233 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 L A R L ALPL L PF+ + K + + Sbjct: 234 VESDVGL--AIVSRTTISKELKLG-TLKALPL------DPPLNRPFSHVRQKHKFRHRAV 284 Query: 305 VWLRETIKNLYASMA 319 L + + A Sbjct: 285 GELLDFAVDYCKEKA 299 >UniRef50_Q2J7C4 Transcriptional regulator, LysR family n=22 Tax=Actinomycetales RepID=Q2J7C4_FRASC Length = 316 Score = 243 bits (622), Expect = 7e-63, Method: Composition-based stats. Identities = 52/318 (16%), Positives = 97/318 (30%), Gaps = 28/318 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 + L+ L + + R T+AA+R++V ++S+ + L PLF + +S TP Sbjct: 1 MQLHQLAYFVAVAETRHFTRAAQRVHVAQPSLSQQIRALEQELGTPLFNRARGNISLTPA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHH-QTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 ++ + + + R L A L L + + +QRYP Sbjct: 61 GETLLPLARRILTDTETARQRVTELLDLRHGTVRLGATPSLCTGFLPDVLRLFHQRYPGI 120 Query: 127 TIKLRN-WDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + + D + + G +D+ A+ L + + Sbjct: 121 RLLVEEGGSRDLVRDLAAGSLDLALIILPLQSS--------DPALATSPLIRESLVLVSS 172 Query: 186 KDHPA--LHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 D P + + +P + A +E G E A+ E + L Sbjct: 173 LDEPPIVAGRPLTVADLRNHPMVMFRRGYDLREATVTACREAGFEPIFAIEGGEMDAVLG 232 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 A L A P + +L + P Q L + Sbjct: 233 FVAA--GLGSAVIPSTVAH-----RLGMRVTPFVLPGLQ-----RTIGLARRRDVEPTRA 280 Query: 304 I----VWLRETIKNLYAS 317 L E +++ AS Sbjct: 281 AVELQRVLWEYLRDAAAS 298 >UniRef50_C6D0V7 Transcriptional regulator, LysR family n=4 Tax=Bacillales RepID=C6D0V7_PAESJ Length = 299 Score = 243 bits (621), Expect = 7e-63, Method: Composition-based stats. Identities = 46/315 (14%), Positives = 110/315 (34%), Gaps = 27/315 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L + + VT+AA+ ++VT S++SK++ +L LF L Sbjct: 5 MELLQLQYFLTVARLEHVTEAARHLHVTQSSLSKTIQRLEEDLGVLLFDRVGRKLRLNES 64 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQ-TPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + + + +P ELA + ML + ++ ++ P Sbjct: 65 GSRFLLRAERALFELDQGKQELNDWSSPEQGTIELAVNT---ASMLPNILREFRKKKPNI 121 Query: 127 TIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 ++ + + + RG++D S I+ ++++ D + + Sbjct: 122 QFHVQMLTTQEMVAHLHRGDIDFCLSSPPLEG----------EDIECQIMYRDAILLAVP 171 Query: 186 KDHPALHQ-TWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 + H + + +L + + +D++ ++ G E E + + Sbjct: 172 ESHRLAGRSSVSLPELKEEWFVGVKKGYGTRDLVDSICKKAGFEPKFVYEGDEPARINAL 231 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 + +A P + N + + E +L LLWHK + Sbjct: 232 VEAE--IGIAFIPGTARNSNGQ---------IAYLEIDNNELVREIALLWHKSRYVSRAA 280 Query: 305 VWLRETIKNLYASMA 319 R+ + N + +++ Sbjct: 281 QSFRKVVVNYFETLS 295 >UniRef50_Q9F1R2 HTH-type transcriptional activator cmpR n=38 Tax=Bacteria RepID=CMPR_SYNE7 Length = 323 Score = 243 bits (621), Expect = 7e-63, Method: Composition-based stats. Identities = 42/318 (13%), Positives = 87/318 (27%), Gaps = 22/318 (6%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 + L L+ L + + S T+AA+ + +T VS + +L PLF L Sbjct: 1 MKNLTLHQLKVFEAAARHSSFTRAAEELYLTQPTVSIQVKQLTKAVGLPLFEQIGKRLYL 60 Query: 65 TPLMVSMEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQIYQRY 123 T + + + + L + LA + L QRY Sbjct: 61 TEAGRQLYKTTRQVFEQLEQLDMTIADLQGMKQGQLRLAVI-TTAKYFIPRLIGPFCQRY 119 Query: 124 PQATIKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCV 182 P + L+ +++ ++ I D+ R I + + V Sbjct: 120 PGINVSLKVTNHEGLINRINDNLDDLYVLSRPPSG----------FDITVQPFLDNPLVV 169 Query: 183 WLRKDHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQS 241 HP + +L+ + P I A + + + + L E Sbjct: 170 VGPASHPLANQRGISLERLAQEPFILRERGSGTREATEQLFAAHNLNLNVKLDLGSNEAI 229 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 L + + L E + + + ++ + Sbjct: 230 KQAILGGLGLAVLSYHTLTSAGA--------TPELKMFEVEGFPIHRQWHAVYPAGKQLS 281 Query: 302 PKIVWLRETIKNLYASMA 319 + + +A Sbjct: 282 TVAATFLDYLLTESQRIA 299 >UniRef50_C3LMU4 Transcriptional regulator, LysR family n=65 Tax=Gammaproteobacteria RepID=C3LMU4_VIBCM Length = 296 Score = 243 bits (621), Expect = 8e-63, Method: Composition-based stats. Identities = 43/311 (13%), Positives = 89/311 (28%), Gaps = 25/311 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +++ L + + S T AA+++++ A+S S+ K LF ++ T Sbjct: 8 MEVRQLRHFVTVAEWESFTLAAQQLHIAQPALSISIKKFEQQLGVTLFKRDERKVALTHE 67 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTP-RGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + ++ +Q N + L A S + + +P Sbjct: 68 GEVLLEHAKRILQQVNDAQLAVDELKGVVKGEVRLGAPSMMGSYFFPQIIMAFKSHFPNL 127 Query: 127 TIKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + + S+ + GE+DIG L LP + + L S + Sbjct: 128 KMTVIEAGTQSIRRMLLSGELDIGVI----------LNHDLPDDLAADPLLSSQMVAVVG 177 Query: 186 KDHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 K+H + F + + +D V +E + L + Sbjct: 178 KNHELAERRHLTFAEFFEHELVMFKPGYFHRDFIDKVCREHKFTADFSFETNLLPMILSI 237 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 + ++ + A+P + L W K + Sbjct: 238 VKHEYAITALL------ELVTSNEPEVKAIPFEPPVW------LDLALAWRKEGYLSNAD 285 Query: 305 VWLRETIKNLY 315 E +K Sbjct: 286 RTFIEFVKKYV 296 >UniRef50_C8VWS6 Transcriptional regulator, LysR family n=1 Tax=Desulfotomaculum acetoxidans DSM 771 RepID=C8VWS6_DESAS Length = 300 Score = 243 bits (621), Expect = 8e-63, Method: Composition-based stats. Identities = 45/313 (14%), Positives = 96/313 (30%), Gaps = 24/313 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++ N L +++ S++KAAK +N+T AVSK +A L F L + PT Sbjct: 1 MNFNFLQTFVTVIEFNSISKAAKALNITQPAVSKQIASLEDHFGIKLLERLGRKMVPTEA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHH-QTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + ++ + + + + + A + +L + ++YPQ Sbjct: 61 GNRLNRHAKIILNSLQQAEKEINEMISEVRGNLVIGASTIPGQYILPKIIGLFKKQYPQV 120 Query: 127 TIKLR-NWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 L + ++ + E+ +G L I L D + Sbjct: 121 KTVLEISDSGKVIEKLLEHEIHLG----------AIGTKVLHDKIASIKLSDDELVLITP 170 Query: 186 KDHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERT---IAMSLPEFEQS 241 +HP +T + + A++ L G I E Sbjct: 171 LEHPFATRKTVKAVELAGEQMVWRESDSGTRHAVEEKLTAKGLNVNNLIITAEFGSTESI 230 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 + + ++ + N+ + + + L+ +++ KR N Sbjct: 231 IGAVEA--GMGISFVSHWAVPENEYRR------NIAVLRLEDIVLDRNLYIIYPKRKYFN 282 Query: 302 PKIVWLRETIKNL 314 + L Sbjct: 283 RTAETFINFLHQL 295 >UniRef50_A6UMN5 Transcriptional regulator, LysR family n=1 Tax=Sinorhizobium medicae WSM419 RepID=A6UMN5_SINMW Length = 296 Score = 243 bits (621), Expect = 8e-63, Method: Composition-based stats. Identities = 35/317 (11%), Positives = 96/317 (30%), Gaps = 26/317 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++ LL + +E +AAKR+N++ ++K + +L LF + + T Sbjct: 1 MEHRLLQSYVAVAEELHFGRAAKRLNISQPPLTKQIQQLERELGVALFERTKRKVELTAA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPH-HQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + ++ + + + + + ++ + + + YP Sbjct: 61 GSVLLEEARRLLRQTENAAELVRKTERGETGHLAVGFIDAAIYSLVPNVVECFTRSYPHV 120 Query: 127 TIKLRNWD-YDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 T++L + D + ++ G +D+GF + E + + V + Sbjct: 121 TVELADLRIPDQVRGVSEGRLDVGFIHPPIRGEQ----------LAIETVLVEPLVVAVP 170 Query: 186 KDHPAL-HQTWNLDTFLRYPHISICWE--QSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 + H L I + + + Q G I + + Sbjct: 171 QRHRLASRAEIPLAELANEALIQFPRSINPTLYDEIIGLCQSSGFNPKIVREATPKQTII 230 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 + L ++ PR + + + + L + ++++ P Sbjct: 231 GLV--SVGLGVSLLPRCLENLKRDG--------VAYRPISGPNLSIDTSIIYRSDR-LRP 279 Query: 303 KIVWLRETIKNLYASMA 319 ++ + Sbjct: 280 ATKAFINVVRTVAREAG 296 >UniRef50_Q47141 Hca operon transcriptional activator n=46 Tax=Gammaproteobacteria RepID=HCAR_ECOLI Length = 296 Score = 243 bits (621), Expect = 8e-63, Method: Composition-based stats. Identities = 48/315 (15%), Positives = 96/315 (30%), Gaps = 25/315 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L + Q + T+AA++++ + ++S + L PL V ++ T Sbjct: 1 MELRHLRYFVAVAQALNFTRAAEKLHTSQPSLSSQIRDLENCVGVPLLVRDKRKVALTAA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQAT 127 Q+ ++ + + + + + +L + R P Sbjct: 61 GECFLQDALAILEQAENAKLRARKIVQEDRQLTIGFVPSAEVNLLPKVLPMFRLRQPDTL 120 Query: 128 IKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRK 186 I+L + + I RGE+D+G IDY LF + V L Sbjct: 121 IELVSLITTQQEEKIRRGELDVGLMRHPV----------YSPEIDYLELFDEPLVVVLPV 170 Query: 187 DHPALH-QTWNLDTFLRYPHISICW--EQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 DHP H + +S S + + + I ++ Sbjct: 171 DHPLAHEKEITAAQLDGVNFVSTDPVYSGSLAPIVKAWFAQENSQPNIVQVATNILVTMN 230 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 + L + P Y +N + F + + W K P Sbjct: 231 LV--GMGLGVTLIPGYMNNFNTGQ--------VVFRPIAGNVPSIALLMAWKKG-EMKPA 279 Query: 304 IVWLRETIKNLYASM 318 + ++ AS+ Sbjct: 280 LRDFIAIVQERLASV 294 >UniRef50_A9B3V4 Transcriptional regulator, LysR family n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9B3V4_HERA2 Length = 298 Score = 242 bits (620), Expect = 1e-62, Method: Composition-based stats. Identities = 40/313 (12%), Positives = 90/313 (28%), Gaps = 26/313 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L+ L + + + +VTKAA ++ ++SK+L L LF G+ + Sbjct: 1 MELSQLRYFEAVARLGNVTKAAHEQHIAQPSLSKALRALEQELGVHLFDRVGRGVELSDA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + + L + ++ +RY Sbjct: 61 GKLLLPYARRVLAELQAARHALQSRADLTVGHVSLGVTPTVGTRLIPQALAAFNRRYRGI 120 Query: 127 TIKLRN-WDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 ++L + ++ + G VD+ H ++ L S+ V + Sbjct: 121 QLELHEAGASELVELLNAGVVDLAIVSALVH------------GVESTTLMSEPLVVAVG 168 Query: 186 KDHPALHQ-TWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 H + + + I + ++ G I + E + + + Sbjct: 169 LQHRFAQRQSIAANELRDEGFILFPQGYELRNYTLQLCEQAGFAPRIVLDGGEMDTVVSL 228 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 A L +A P+ L L+ L+ H + +P Sbjct: 229 VAA--GLGVAVVPQLAIDQRMG---------LHALMIDAGGLQRTLRLIRHSQRQPSPAA 277 Query: 305 VWLRETIKNLYAS 317 L + + Sbjct: 278 AALHRVLHEWVSQ 290 >UniRef50_C9PFK4 Transcriptional regulator substrate-binding of LysR family protein n=1 Tax=Vibrio furnissii CIP 102972 RepID=C9PFK4_VIBFU Length = 304 Score = 242 bits (619), Expect = 1e-62, Method: Composition-based stats. Identities = 43/309 (13%), Positives = 93/309 (30%), Gaps = 25/309 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L L + TK A ++N+ SA+S S+ KL L + + T Sbjct: 1 MELKRLQYFVALAANGNFTKTADQLNIAQSALSVSMQKLEKEIGLKLINRTNRQIQLTSD 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + + ++ L + K + + L + YP Sbjct: 61 GMRLLFHARRILEDVALAEIEMDELKGLERGKIDFGVSAMLGSYFFPEALAAFTETYPNI 120 Query: 127 TIKLRNWDYDSLD-AITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 I ++ +L+ + G +D+ F + + Y L + + Sbjct: 121 RIHIQEHGTATLEKMLLEGALDLAFVRTDQPLEQ----------LRYVALCPEEIVACVN 170 Query: 186 KDHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 K HP ++ +L+ F + P I A+ + I E + Sbjct: 171 KSHPFAQRSEVSLEQFCQQPLILFRDGYLLREAISRYCRNNNITPDIRYETNLIELVKAL 230 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 + + R + L V ++V F + W + + Sbjct: 231 LKKDIGIS-TCLRRII---HDNEPLVCVPF--------NPPIKVEFGIGWKSSHYLSNAA 278 Query: 305 VWLRETIKN 313 + +++ Sbjct: 279 RAFLKFMED 287 >UniRef50_P25544 RuBisCO operon transcriptional regulator n=13 Tax=Proteobacteria RepID=RBCR_CHRVI Length = 302 Score = 242 bits (619), Expect = 1e-62, Method: Composition-based stats. Identities = 44/315 (13%), Positives = 90/315 (28%), Gaps = 22/315 (6%) Query: 7 TLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTP 66 + L L + + + S T+AA+ ++++ AVS + +L LF + T Sbjct: 2 HVSLRQLRVFEAVARHNSYTRAAEELHLSQPAVSMQVRQLEDEIGLSLFERLGKQVVLTE 61 Query: 67 LMVSMEQNLAEWMQMSNLLLDKPHHQTP-RGLKFELAAESPLMMIMLNALSKQIYQRYPQ 125 + Q + + +A S + L QR+ Sbjct: 62 AGREVFHYSRAIGQSLREMEEVLESLKGVSRGSLRIAVASTV-NYFAPRLMAIFQQRHSG 120 Query: 126 ATIKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 ++L + + + + VD+ G ++ E + V Sbjct: 121 IGLRLDVTNRESLVQMLDSNSVDLVLMGVPPRNV----------EVEAEAFMDNPLVVIA 170 Query: 185 RKDHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 DHP + +L + A++ E G+ M + E Sbjct: 171 PPDHPLAGERAISLARLAEETFVMREEGSGTRQAMERFFSERGQTIRHGMQMTRNEAVKQ 230 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 L + + LV L + + L++ + +P Sbjct: 231 AVRSGLGLSVVSLHTIELELETR---RLVTLDVE-----GFPDRRQWYLVYRRGKRLSPA 282 Query: 304 IVWLRETIKNLYASM 318 RE + + A M Sbjct: 283 AGAFREFVLSEAARM 297 >UniRef50_A9WIA6 LysR substrate-binding n=4 Tax=Chloroflexaceae RepID=A9WIA6_CHLAA Length = 307 Score = 242 bits (619), Expect = 1e-62, Method: Composition-based stats. Identities = 46/303 (15%), Positives = 102/303 (33%), Gaps = 22/303 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 L+L+LL ++++ S TKAA+ + ++ SAVS+++ +L L G++PT Sbjct: 17 LNLHLLRIYVAVLEQGSFTKAAEVLTMSQSAVSRAVQELERQLGTTLLERRARGVAPTMA 76 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + ++ L ++ + + + A S + + +L L ++RYP Sbjct: 77 GTILGEHARRIFTHERLAIEALNELRGLQRGRLAIGASSTIGIYLLPPLLGNYHRRYPGI 136 Query: 127 TIKLRNWDYDS-LDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + L + ++ + ++D+ + + SD V Sbjct: 137 ELFLDIGNTQQIIERLLSYQIDVAYVEGPVAAN---------EDLQVVPWRSDEMVVIAS 187 Query: 186 KDHPALHQ-TWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 DHP + T + P I ++ L M L E Sbjct: 188 PDHPLTRRVTLDCSDLQDAPFIMREPGSGTRKVMEQALAAHNVTVRPVMELGSTEAVKQA 247 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQ-LPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 + L L+ R+ + L ++ +P ++ + + + Sbjct: 248 VSA--GLGLSMVSRFTIQSELIAGKLRVLNIP-------GLNIQRQLSRVRLHDRPQSLA 298 Query: 304 IVW 306 + Sbjct: 299 LEA 301 >UniRef50_Q2RHB2 Transcriptional regulator, LysR family n=1 Tax=Moorella thermoacetica ATCC 39073 RepID=Q2RHB2_MOOTA Length = 297 Score = 242 bits (619), Expect = 1e-62, Method: Composition-based stats. Identities = 42/297 (14%), Positives = 97/297 (32%), Gaps = 24/297 (8%) Query: 11 NLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVS 70 N LL + + +++S ++AA+ +++T A+S + L +F L + ++ T Sbjct: 4 NQLLTFKAVAEQKSFSRAARVLHLTQPAISLHIQSLEEYFGTRLLDRNNRQVTLTEAGRV 63 Query: 71 MEQNLAEWMQMSNLLLDKPHHQTP-RGLKFELAAESPLMMIMLNALSKQIYQRYPQATIK 129 + E ++ + + + + A + L +++ + ++YP I Sbjct: 64 LYNYALELSRLYDEVKKALADISGKVKGNLVVGATLTIGEYFLPSIAGEFKRQYPDVEIT 123 Query: 130 LRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDH 188 LR + + + GE+D+ + + E LF D + + +H Sbjct: 124 LRIANTQEIICRTLDGELDLALIEG----------QAKHPNLIQEDLFQDELVLIIHPEH 173 Query: 189 PALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGR---ERTIAMSLPEFEQSLFM 244 + + P I + L++ G + M L + Sbjct: 174 RWAGRREITPEELREEPLILREEGSGTRQITEAGLRKAGLELSTLKVVMELGSTQAIKEA 233 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 L +A R + L L Q F + +++ + Sbjct: 234 VEA--GLGVAIISRLAIKKEIRYNL------LREVRLQGIDFRRTFHIAYNRHKFRS 282 >UniRef50_Q2RHG4 Transcriptional regulator, LysR family n=1 Tax=Moorella thermoacetica ATCC 39073 RepID=Q2RHG4_MOOTA Length = 302 Score = 242 bits (619), Expect = 1e-62, Method: Composition-based stats. Identities = 46/313 (14%), Positives = 93/313 (29%), Gaps = 24/313 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +++N L+ +++ +++ AA+ +++T AVSK L L +F L + T Sbjct: 1 MNINHLITFITTVEKGTLSAAAEELHLTQPAVSKQLQALEDYFGLRLLERRGREVRLTAA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 ++ N + T + L A + +L L + YP+ Sbjct: 61 GEICYRHARIIASHLNQTRRELAELTQLVRGRLLLGASTTPGQYILPRLIGAFRREYPRV 120 Query: 127 TIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + L D + + + GE+D+ + Y L D + + Sbjct: 121 EVILTIADTQEVVQRLQEGEIDL---------GVVGAAGGRGKNLSYSRLAGDELVLIVP 171 Query: 186 KDHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRER---TIAMSLPEFEQS 241 H T + P + ++ L G I M L E Sbjct: 172 PGHRLAGATAISPGELKEEPLVWRESGSGTRRVVEERLAAAGFTVDPEQIVMELGSTEAI 231 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 + L ++ + + L Q L+ L+ +R + Sbjct: 232 VSAVEA--GLGISLVTSWAVEKSVKLG------RLAVVTLQGVDLKRDLYLV-RRRQPLS 282 Query: 302 PKIVWLRETIKNL 314 P + Sbjct: 283 PAAEAFVNFAADH 295 >UniRef50_C5BDD2 HTH-type transcriptional regulator AlsR n=2 Tax=Edwardsiella RepID=C5BDD2_EDWI9 Length = 330 Score = 242 bits (618), Expect = 2e-62, Method: Composition-based stats. Identities = 48/332 (14%), Positives = 108/332 (32%), Gaps = 38/332 (11%) Query: 1 MKKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPL 60 M +++ L + +ER +AA+R+N++ +S+ + L L + + Sbjct: 16 MVM---RIEIRHLKYFIAVAEERHFNRAAERLNISQPPLSQQIQSLERELGACLLMRTNR 72 Query: 61 GLSPTPLMVSMEQNLAEWMQMSNLLLD-KPHHQTPRGLKFELAAESPLMMIMLNALSKQI 119 +S T + + + + S + + ++ + Sbjct: 73 SVSLTQAGSLFLKECYSIVGQLEQAAEKAARAHRGETGDLTIGFTSSV--PFIPRVAHSL 130 Query: 120 ---YQRYPQATIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVL 175 RYPQ +++R + ++ + G++DIG + LP + + VL Sbjct: 131 FSYRHRYPQVHLQMRELNTKQQIEPLVDGKLDIGILR----------NTLLPGVLKHRVL 180 Query: 176 FSDVPCVWLRKDHPALHQ--TWNLDTFLRYPHISICWEQSD--TWALDNVLQELGRERTI 231 + L + HP + P + L ++L+ G I Sbjct: 181 QREPLVAVLHRHHPLAQRGQALRFSDLADQPFVFFSRGDGTALYDELLSLLKRAGIVPYI 240 Query: 232 AMSLPEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFT 291 + E + + + L ++ P Q+ + AL + Sbjct: 241 TQEVGEAMTIVGLISA--GLGVSILPASYTRI-QVDGVCYRALD-------EPDAYTEVW 290 Query: 292 LLWHKRNSHNPKIVWLRETIKN----LYASMA 319 L +H++ + + L + L AS+A Sbjct: 291 LAYHRQRPLSAQATALIALLTAPSSNLIASLA 322 >UniRef50_Q122V6 Transcriptional regulator, LysR family n=3 Tax=Comamonadaceae RepID=Q122V6_POLSJ Length = 307 Score = 242 bits (618), Expect = 2e-62, Method: Composition-based stats. Identities = 52/318 (16%), Positives = 102/318 (32%), Gaps = 23/318 (7%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 + DL L + + S AA+ IN++ A+S+ + KL LF + + Sbjct: 1 MARINFDLQQLQGFVAVAERGSFRAAAEHINLSSPALSRRIDKLETILGARLFNRTTREV 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNALSKQIYQ 121 TPL + + + + +A + L + Q Sbjct: 61 ELTPLGRVFLERARTALDDLESAMLGIADIATHRGGRVTVACVPSAALYFLPTVVSNFSQ 120 Query: 122 RYPQATIKLRNWD-YDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 YP +++ + L ++ GE D G +++L I +E + +D Sbjct: 121 HYPGIRVRVVDETMNQVLQSVLSGESDFGIGF----------MNTLVPEIAFESIHNDPF 170 Query: 181 CVWLRKDHPALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFE 239 + +R++HP ++ N + I++ + LD+ L + G + A + Sbjct: 171 VLAMRREHPLARHKSVNWADVEKESLIAVARSSGNRQLLDDSLTKAGLNPSFAFEVSHVA 230 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 L M L + L LPL Q + LL Sbjct: 231 TLLGMVEAGLGLAAVPRMALASTHATLVGLPLR----------QPQTVRRVGLLTRHGVK 280 Query: 300 HNPKIVWLRETIKNLYAS 317 P + ++ + Sbjct: 281 LRPAAEMFHQHLRRALKT 298 >UniRef50_A1WVW1 Transcriptional regulator, LysR family n=11 Tax=Proteobacteria RepID=A1WVW1_HALHL Length = 318 Score = 242 bits (618), Expect = 2e-62, Method: Composition-based stats. Identities = 47/314 (14%), Positives = 86/314 (27%), Gaps = 22/314 (7%) Query: 7 TLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTP 66 + L L + + + S T+AA+ + +T AVS + +L PLF + T Sbjct: 2 NITLRQLQVFESVARHLSFTRAAEELYLTQPAVSMQIKQLEQQVGLPLFEQIGKRIYLTE 61 Query: 67 LMVSMEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQIYQRYPQ 125 + + L D + L + L +R P Sbjct: 62 AGEEVRRYAQRISAELRELADGLEALRGLNSGRLRL-TVASTANYFATDLLAAFTRRQPG 120 Query: 126 ATIKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 T +L + + + I E+D+ GR + E + + Sbjct: 121 VTFQLEVTNREGVIRRIQDNEMDLAVMGRPPEGL----------DVAAEAFMPNPLVIIA 170 Query: 185 RKDHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 DHP L+ + A+ VL+E G + + E Sbjct: 171 APDHPLADGSPIPLERLQDELFVLREQGSGTRNAVQRVLEERGMNLRGGLEMSSNEAIKQ 230 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 L + + L + LE + L+ +P Sbjct: 231 SVQAGLGLGVVSIHTVALELELGR--------LRVLNVEGFPLERQWYLVHRSGKRLSPA 282 Query: 304 IVWLRETIKNLYAS 317 R+ I + Sbjct: 283 AEAFRQFILDEAHR 296 >UniRef50_C0Z7P7 Probable transcriptional regulator n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0Z7P7_BREBN Length = 290 Score = 242 bits (618), Expect = 2e-62, Method: Composition-based stats. Identities = 42/307 (13%), Positives = 89/307 (28%), Gaps = 24/307 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +D+ L + +E +T AAKR+N+ +S+ L ++ L S + T Sbjct: 1 MDIRQLRYFIAIAEEGQITGAAKRLNMAQPPLSQQLKQMEEELGTMLVERSGKQIVLTEA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHH-QTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 +++ + + L + + L L + Q+YP Sbjct: 61 GITLYKQALNIVHQMEEALSEVKETGEGIRGTLSIGVS-ALSAYRLPEQIRVFQQKYPLI 119 Query: 127 TIKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 T K+ D L + R +++ + ++ L + + + Sbjct: 120 TYKIWKGDTQLLNQWLERRTIEVAIVRLPHSLNNCTMI----------PLEEEDFVLIVP 169 Query: 186 KDHPAL-HQTWNLDTFLRYPHISIC-WEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 P + + P I + LG E + P+ + Sbjct: 170 ATSPYADRKAIEMREIAELPLIMPSTPGLGIYDLIIKEFSRLGVEPHVICECPDISLIVS 229 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 M A + + P +Q Q+ + L + ++W + Sbjct: 230 MVASS--VGSSIVPISAWETHQSEQIRGIRL-------SGTSIYSSAAVVWQSGRHLSKA 280 Query: 304 IVWLRET 310 ET Sbjct: 281 ANRFIET 287 >UniRef50_C1DGS2 Transcriptinal regulator, LysR family n=1 Tax=Azotobacter vinelandii DJ RepID=C1DGS2_AZOVD Length = 301 Score = 241 bits (617), Expect = 2e-62, Method: Composition-based stats. Identities = 53/309 (17%), Positives = 109/309 (35%), Gaps = 27/309 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L L + KAA+ +++T +S+ ++ L A LF + T Sbjct: 2 IELRQLRYFMALAEHLHFGKAAESLHITQPPLSRQISALEADLGVVLFSRHSRSVELTAA 61 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHH-QTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 +Q+ + +L + + ++ I+L L K YP Sbjct: 62 GRDFQQHAKTALAELDLAIRSTRASARGERGELRVSFTMVAAWILLPELLKAYSDAYPDV 121 Query: 127 TIKLRN-WDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 ++ L D A+ RGE DI + S +S + Y L + C L Sbjct: 122 SLALNEVLPRDLGPALERGEADIALTFPSSGSKS----------LCYRALRREPLCAVLP 171 Query: 186 KDHPALHQT-WNLDTFLRYPHISICW--EQSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 HP T +++ P I+ + A+ + + G E I + + + Sbjct: 172 ASHPLAAATEFSIAALADEPFITFPRQTAPALHEAVMSCCRRAGFEPKIRLETHLQQTIV 231 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 + A+ L ++ P + ++ + A+ + V + ++W+ RN + P Sbjct: 232 NLVAE--GLGVSVVPGSMRKM-RMPGVAFKAI--------DRSPPVEYGVIWNPRNEN-P 279 Query: 303 KIVWLRETI 311 + + Sbjct: 280 CLNTFLRCV 288 >UniRef50_A4FE82 LysR-family transcriptional regulator n=5 Tax=Actinomycetales RepID=A4FE82_SACEN Length = 294 Score = 241 bits (617), Expect = 2e-62, Method: Composition-based stats. Identities = 50/313 (15%), Positives = 103/313 (32%), Gaps = 25/313 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L + +E T+AAKR++V S +S S+ L LF + ++ T Sbjct: 1 MELRQLEYFVAVAEECHFTRAAKRLHVAQSGLSASIRSLERELGARLFHRTTRNVTLTAA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTP-RGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 ++ + + D + + L ++ L + +P Sbjct: 61 GHALLHEARRALCAVDSARDAVAAVRGLLRGELSIGTLQCLHVVDLPPVLAGFVTAHPGI 120 Query: 127 TIKLRN-WDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 ++LR D + + G +D+ F+ R + P + L ++ + Sbjct: 121 EVRLRQGGSGDLAEQVRAGRLDLAFAVRP---------ARCPDGVLVHSLDTEPLVLACA 171 Query: 186 KDHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 DHP + P + + +D VL E G ER +A+ + + L + Sbjct: 172 GDHPMAERDRVDPRELGEQPFVDFHPDWGTRDVVDRVLAETGVERRVALEVTDVHSLLEL 231 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 A L +A PR + +PL + + + + + Sbjct: 232 VAC--GLGIALVPRS----FSAKNGQVRFVPLASPAPTWETVAIT-------SDPTSTAA 278 Query: 305 VWLRETIKNLYAS 317 L ++ Sbjct: 279 AALLRDVQEASRR 291 >UniRef50_D1VD43 Transcriptional regulator, LysR family n=1 Tax=Frankia sp. EuI1c RepID=D1VD43_9ACTO Length = 361 Score = 241 bits (617), Expect = 2e-62, Method: Composition-based stats. Identities = 48/311 (15%), Positives = 90/311 (28%), Gaps = 24/311 (7%) Query: 10 LNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMV 69 L L + + + T+AA R++V ++S + L PLF + ++ T Sbjct: 21 LQQLAYFVAVAETKHFTRAAARVHVAQPSLSAQIRALETELGSPLFNRARGNITLTAAGE 80 Query: 70 SMEQNLAEWMQMSNLLLDKPHHQ-TPRGLKFELAAESPLMMIMLNALSKQIYQRYPQATI 128 ++ + + +++ + R + A L ML + + QRYP + Sbjct: 81 ALLPLARKILADADMARREVQELTDLRRGTVRVGATPSLCTGMLPEVLRLFRQRYPGIQL 140 Query: 129 KLRN-WDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKD 187 + D + + G +D+ A+ L + V D Sbjct: 141 LVEEGGSRDLVGELAVGALDLALIILPLQGS--------DPALATAPLLREDLVVISSPD 192 Query: 188 HPALHQT--WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMA 245 P +T ++ P + + G E T A+ E + Sbjct: 193 GPPPVRTAQMAVEDLRDRPLVMFRRGYDLRDFTVGACRAAGFEPTFAIEGGEMDAVCGFV 252 Query: 246 AQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIV 305 L +A P PL L L + Sbjct: 253 MA--GLGIAVIPSMVA----------FRQPLRTTPFAAPGLHRTIGLAHRRDVEPPRAAR 300 Query: 306 WLRETIKNLYA 316 LR T+ + A Sbjct: 301 ELRATLVDFVA 311 >UniRef50_C1M4D9 Putative uncharacterized protein n=2 Tax=Citrobacter RepID=C1M4D9_9ENTR Length = 302 Score = 241 bits (617), Expect = 3e-62, Method: Composition-based stats. Identities = 42/318 (13%), Positives = 106/318 (33%), Gaps = 26/318 (8%) Query: 7 TLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTP 66 ++L L + +E +AA R+N++ +S+ + L L + ++ T Sbjct: 2 NIELRHLRYFVAVAEELHFGRAAARLNISQPPLSQQIQILEQQVGARLLARTNRSVALTS 61 Query: 67 LMVSMEQNLAEWMQMSNLLLDKPHHQT-PRGLKFELAAESPLMMI-MLNALSKQIYQRYP 124 + + + + N + + + S I ++ Q YP Sbjct: 62 AGKQFLADSRQILGLVNEAAARAERLHLGEAGELRIGFTSSAPFIKAVSDTLSLFRQSYP 121 Query: 125 QATIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVW 183 ++ R + + + G +D+G + LP ++ E++ + Sbjct: 122 AVHMQTREMNTREQIAPLNEGTLDLGLLRN----------TQLPETLEREIILHEPLMAM 171 Query: 184 LRKDHPALHQT-WNLDTFLRYPHISICW--EQSDTWALDNVLQELGRERTIAMSLPEFEQ 240 + + HP + L P + + +++ G + TIA + E Sbjct: 172 IPRAHPLAQKPVVTLAELANEPFVFFDPHVGTGLYDDILGLMRRYGLKPTIAQEVGEAMT 231 Query: 241 SLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 + + A L ++ P + ++ + +P+ ++ L+W K + Sbjct: 232 IIGLVAA--GLGVSILPAS---FKRVQLYEMCWIPIA-----EEDAVSEMWLVWPKHHEQ 281 Query: 301 NPKIVWLRETIKNLYASM 318 + RE + ++ Sbjct: 282 SHAAQRFREQLLAAVQAI 299 >UniRef50_B5WR38 Transcriptional regulator, LysR family n=2 Tax=Betaproteobacteria RepID=B5WR38_9BURK Length = 309 Score = 241 bits (617), Expect = 3e-62, Method: Composition-based stats. Identities = 47/317 (14%), Positives = 98/317 (30%), Gaps = 27/317 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L ++ +E T+AA+R+ + +S + +L LF G+ T Sbjct: 1 MELRHLRYFVVVAEELHFTRAAERLGIGQPPLSLQIQRLERDIGATLFRRLSRGVELTEA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELA-AESPLMMIMLNALSKQIYQRYPQ 125 V + N + + + + + A + + ++ A+ ++ R+P Sbjct: 61 GVLLLDNARHILALVDRTCTDVQRLSRGEIGHMRVGFAGATYFLPLVPAIIREYRTRHPD 120 Query: 126 ATIKLRN-WDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 + +D + G VD F +D E+L + V L Sbjct: 121 VVLSPEQSNTPSLVDGLLEGRVDAAFIRPPIVSA---------DELDVELLVKEDMVVVL 171 Query: 185 RKDHPALH--QTWNLDTFLRYPHISICW--EQSDTWALDNVLQELGRERTIAMSLPEFEQ 240 HP + L + A+ + Q G + P+ Sbjct: 172 PHSHPLARAGEPVPLSALAEETFLLFPRAIGAGLYDAITSACQRAGFLPRLGQEAPQIVS 231 Query: 241 SLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 + ++ PR +V LP+ + P +L W + N Sbjct: 232 IAPLV--GAGFGVSIVPRSTTQIQTDE---VVYLPIA-----GNAPKAPISLAWRRHNP- 280 Query: 301 NPKIVWLRETIKNLYAS 317 +P + R + + Sbjct: 281 SPVVRLFRAVAREMARE 297 >UniRef50_C6BXQ9 Transcriptional regulator, LysR family n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6BXQ9_DESAD Length = 301 Score = 241 bits (616), Expect = 3e-62, Method: Composition-based stats. Identities = 46/311 (14%), Positives = 95/311 (30%), Gaps = 25/311 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++ L + +E +AAKR+ ++ +S+ + K LF + ++ T Sbjct: 1 METRQLKYFLAVAEELHFGRAAKRLFISQPPLSQQIKKFEDELGVKLFQRNKRSVALTAA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQT-PRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 VS+ ++ M+ G +F L P + L + + +YP Sbjct: 61 GVSLLRDAPGIMRAIGRAKSNLLDAATGEGGQFTLGYIGPALETTLTEIIRDFKGQYPSV 120 Query: 127 TIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + LR D L AI G++D G H S ++ E+ + + + Sbjct: 121 RLDLREMFTTDQLKAIRSGDIDAGIVRLFRHDVS---------DLERELFHRESYALVVP 171 Query: 186 KDHPAL-HQTWNLDTFLRYPHISICWEQSDT--WALDNVLQELGRERTIAMSLPEFEQSL 242 HP ++ I E V E G + ++ Sbjct: 172 DGHPLADRAAVDVSELAGEQFIFFPREGQPRLYDEWMRVFSEAGFVPDVVQEATRKSATV 231 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 + A + + P + + F + +L++ N P Sbjct: 232 ALVAANMGIGI--VPESMA--------RIKPQGVVFKRLSGDFPVIEMSLIYRSTNGF-P 280 Query: 303 KIVWLRETIKN 313 + ++ Sbjct: 281 AVDNFIAAVRQ 291 >UniRef50_A1W256 Transcriptional regulator, LysR family n=2 Tax=Comamonadaceae RepID=A1W256_ACISJ Length = 323 Score = 241 bits (616), Expect = 3e-62, Method: Composition-based stats. Identities = 69/317 (21%), Positives = 122/317 (38%), Gaps = 12/317 (3%) Query: 4 SITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLS 63 + TLDLNLL +M ER++T+AA+++ +T AVS +L +LR D L G+ Sbjct: 5 NFRTLDLNLLRVFDEVMAERNLTRAAEKLAITQPAVSNALRRLREVLGDELVTRRGHGVE 64 Query: 64 PTPLMVSMEQNLAEWMQMSNLLLDK-PHHQTPRGLKFELAAESPLMMIMLNALSKQIYQR 122 PTP +++ + + L F LA ++ L + + + Sbjct: 65 PTPRALALWPAVRHALAQLQETLSPGRFDPASAQTTFVLAMADATGATLIPPLIEIVERE 124 Query: 123 YPQATIKLRNWDYDSLDAITRGE-VDIGFSGRESHPRSRELLSSLPLAI--DYEVLFSDV 179 P ++++ + E D+ + + + + L+ Sbjct: 125 APGVSLRVVPLTTRDPRRLLDEESADMAVGYFPAVLADLTARAQSDNVVAHESTRLYDSQ 184 Query: 180 PCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFE 239 +R DHP LD + H+ + + +D L LGRER I +++ +F Sbjct: 185 YVCVMRADHPLAAVPMTLDLYCAARHLLVSFSGKPFGFIDGALAALGRERRIVLTVNQFF 244 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 + + A D L + + + +L LP+ V LWH+R + Sbjct: 245 TAGRVVATTDLLTV-LPRHFVGVASVRDELVWRPLPMTLP-------PVHVDALWHRRRN 296 Query: 300 HNPKIVWLRETIKNLYA 316 H+P WLRE I Sbjct: 297 HDPAHRWLREAIARAAR 313 >UniRef50_UPI0001694914 Transcriptional Regulator, LysR family protein n=1 Tax=Paenibacillus larvae subsp. larvae BRL-230010 RepID=UPI0001694914 Length = 299 Score = 241 bits (616), Expect = 3e-62, Method: Composition-based stats. Identities = 43/309 (13%), Positives = 99/309 (32%), Gaps = 27/309 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L + +E + +AA R+N+T +S+ + +L PL + + T Sbjct: 1 MELRHLRYFVTVAEELNFGRAAARLNITQPPLSQQIRQLEQELGFPLLFRTKQRVELTEA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQT-PRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + + LD + ++A ++ L + R+P Sbjct: 61 GKVFLEEARITLAHIDKTLDSARRAHLGAAGRLDIAFVGSATYRIVP-LLQSYRMRFPSV 119 Query: 127 TIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 ++ L + L A+ ++ +G + V++ + V L Sbjct: 120 SLVLHQMKTANQLQALHESQIHLGIIRSPVQSPL----------LASTVIYRERFLVALP 169 Query: 186 KDHPALHQ-TWNLDTFLRYPHISICW--EQSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 HP + + I A+ + + G IA+ PE + Sbjct: 170 HTHPLTRENQLRIQDLEHQDFILPSRSNGSMYHEAVIRLCFQSGFYPKIALEAPEILTIV 229 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 + + +A P + + +V + E + + ++W K N + Sbjct: 230 AFVSA--GMGIALVPAS---FQNQQNIGVV-----YRELENVGTMLDMVMVWRK-NEKSQ 278 Query: 303 KIVWLRETI 311 + + I Sbjct: 279 VLKQFLQHI 287 >UniRef50_A9F7Y4 Transcriptional regulator, LysR family n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9F7Y4_SORC5 Length = 327 Score = 240 bits (615), Expect = 4e-62, Method: Composition-based stats. Identities = 47/312 (15%), Positives = 99/312 (31%), Gaps = 28/312 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +DL L + +ER +AA+R+ + +S+ + L + LF S + TP Sbjct: 1 MDLRHLRYFTAVAEERHFGRAAQRLGIAQPPLSRQIQDLESELGFSLFDRSRRRVELTPA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQT-PRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + ++ L + + + + + S L + L + P Sbjct: 61 GAVLLAHVRRVFDALELAVHEARRASVGETGRLVVGYLSSLAYSGITELVRTFRGELPAV 120 Query: 127 TIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + LR + ++A+ G +D+GF H + E + + V L Sbjct: 121 ELALREMPPQEQIEALKDGRIDVGFVRAPLH----------DARLASECVRREPLLVALP 170 Query: 186 KDHPA-LHQTWNLDTFLRYPHISIC--WEQSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 DHP + L+ R P + + + + + G IA + L Sbjct: 171 ADHPLAARKRIPLELLSREPFVVFPRQRGSAFFDLVMGLCRAAGFSPRIAQEALHLD-IL 229 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 + A ++ P + + L L + + W +P Sbjct: 230 SLVAA--GFGVSILPESIKNVGRK-GLALRPI--------VGAPSTDLLVAWRAD-DASP 277 Query: 303 KIVWLRETIKNL 314 + ++ + Sbjct: 278 TLRQFLSFVRRV 289 >UniRef50_B5CN01 Putative uncharacterized protein n=2 Tax=Bacteria RepID=B5CN01_9FIRM Length = 297 Score = 240 bits (615), Expect = 4e-62, Method: Composition-based stats. Identities = 52/309 (16%), Positives = 108/309 (34%), Gaps = 25/309 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L L ++R TKAA+++N+T ++S ++++L LF +S T Sbjct: 1 MNLYQLRYFLELAEKRQYTKAARQLNITQPSLSYAISQLENELGVKLFEKDGRTISLTDC 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQ-- 125 + +E + + + + + K L L + L+ + ++ P Sbjct: 61 GRDLAGCASESLAILDKGIANLKRKAAGAGKIRLGFLRTLGTDYIPDLASRYLKQNPDKE 120 Query: 126 ATIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 T + L+++ GE DI FS Y + + + Sbjct: 121 TTFRFHTGSTGALLESLNAGEYDIVFSSEPPES----------NDFHYTPVMKQDLVLIV 170 Query: 185 RKDHPALHQ-TWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 HP Q L L YP+I + D + +++G++ I E + Sbjct: 171 PDGHPLADQYRIPLSETLAYPYIYFDQSAGLRYVTDLLFEQIGQKPEIVYETDEDQVIAG 230 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 + A +A P L+ L + + + + ++ +R+ +P Sbjct: 231 LVAH--GFGIALVPYMEL---------LLRLNVRILQISYPECQRDIYMVTSRRHELSPA 279 Query: 304 IVWLRETIK 312 RE + Sbjct: 280 AHHFREFVL 288 >UniRef50_Q1IRM1 Transcriptional regulator, LysR family n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1IRM1_ACIBL Length = 302 Score = 240 bits (615), Expect = 4e-62, Method: Composition-based stats. Identities = 43/308 (13%), Positives = 99/308 (32%), Gaps = 22/308 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +D + LL + + + ++A +++ + SAVS + +L + + LF S + +P Sbjct: 1 MDFDQLLTFLEVAKLGNFSRAGEKVYRSQSAVSAQIRQLEQEYGERLFDRSGKIVRLSPA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQ-TPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + + + N L Q + A + +L + + Q++PQ Sbjct: 61 GEVLLEYAQRMVALRNESLRAVADQGETPRGVLSIGANEATCLYVLPDIFTEYCQQFPQV 120 Query: 127 TIKL-RNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 I + RN+ L A+ G +D+G + S + +F D + + Sbjct: 121 QITVYRNFSRKILQAVEDGVIDLGIATLPVKSPS----------LKVHPIFRDRLELMVP 170 Query: 186 KDHPA-LHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 HP ++ ++ YP I LD + + + +AM +P Sbjct: 171 VRHPLAAKESVTIEEIAEYPQIFPKTGY-TRQQLDKLFRPYNSKLRVAMEIPSVGLIKSF 229 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 + + + L++ + Sbjct: 230 VVS--GVGVTLLSSTFAQDEVRAGKA------KMLPIAGVDMWRELGLIYRNDRTLPRSA 281 Query: 305 VWLRETIK 312 + ++ Sbjct: 282 TAFIDLMR 289 >UniRef50_C1F961 Transcriptional regulator, LysR family n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F961_ACIC5 Length = 288 Score = 240 bits (615), Expect = 4e-62, Method: Composition-based stats. Identities = 33/270 (12%), Positives = 81/270 (30%), Gaps = 17/270 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++ + L + + + + ++AA+R V ++S+ + KL LF L T Sbjct: 1 MEFHQLRYVCAIAETGNFSRAAERCQVAQPSLSQQVLKLEEDLGVKLFDRLGRSLRITEA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHH-QTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + + + + ++ + ++YP+A Sbjct: 61 GRAFLPHARSILHQMEAARASVAGKSKDVRGSVAVGVIPTIAPYLMPRYTAAFARKYPEA 120 Query: 127 TIKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 +++ ++++ +D+ ++ L ++ L Sbjct: 121 RLRIVEETTPVLVESLRNLSIDLAVLALPLR----------HKDLECIPLLTEPMFAVLP 170 Query: 186 KDHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 KDHP QT +L + + IA +F M Sbjct: 171 KDHPRASAQTLSLKDLRGETFVMLRDGHCFRDLSLAACSHARVTPRIAFESGQFRSLFGM 230 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVAL 274 A + ++ P+ ++ V L Sbjct: 231 VAA--GMGVSLVPQMA--MDRSAGCAYVRL 256 >UniRef50_C6C982 Transcriptional regulator, LysR family n=1 Tax=Dickeya dadantii Ech703 RepID=C6C982_DICDC Length = 298 Score = 240 bits (614), Expect = 5e-62, Method: Composition-based stats. Identities = 45/318 (14%), Positives = 100/318 (31%), Gaps = 23/318 (7%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 +I+ + L L + + ++A +++T SA+S S+ L LF + + Sbjct: 1 MNISNISLRQLRIFLAVAEHHGFSRAGNMMSLTQSAMSHSIGDLENELGIRLFERTTREV 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLL-DKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQ 121 T + + L + L + R +A + ++ QI + Sbjct: 61 LLTQEGAELSEALRRVLGELETTLCNTQSRAERRRGLVHVATSPTISAGIMPDCIAQIAE 120 Query: 122 RYPQATIKLRN-WDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 YPQ + + + ++ + GEVD G S+P + E + Sbjct: 121 NYPQVNLIIHDRVQQQAMQMVLNGEVDFGVIIEP----------SVPSDLYTETFMEEPF 170 Query: 181 CVWLRKDHPALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFE 239 C+ L ++H + + + + +DN L G + L Sbjct: 171 CLVLPENHQIARLKQVTWHDLQNQEMVLLDYASGSRPLIDNALIRHGVTPHVIQELGHVT 230 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 + + ++ P+ + L + L L+ + +S Sbjct: 231 TIFRILQS--GIGVSVIPQLALSSLECSGLAVRQL--------WPIENRRLQLVRRRNHS 280 Query: 300 HNPKIVWLRETIKNLYAS 317 + + I+ L + Sbjct: 281 LSTAATAIWTLIQTLCQA 298 >UniRef50_A6SW66 Transcriptional regulator, LysR family n=1 Tax=Janthinobacterium sp. Marseille RepID=A6SW66_JANMA Length = 289 Score = 240 bits (614), Expect = 5e-62, Method: Composition-based stats. Identities = 45/311 (14%), Positives = 96/311 (30%), Gaps = 25/311 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L Q +S T+A++ +++T +S + ++ LF + T Sbjct: 1 MELRHLRYFLAAAQSQSFTRASESLHITQPTLSHQIKQIEDELGIQLFDRVGRVVKLTTA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + + LD + + S L + + YP Sbjct: 61 GELFQVYAKRALLEVDAGLDALNELENLKHGRVTFGVLSSFGTFHLPPILADFNKVYPGI 120 Query: 127 TIK-LRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 I LR + + + G++ G + S I+ E LF+ + + Sbjct: 121 KITVLRLRSGEIEERLLDGDLHFGVAYAPSSTEQ----------INVEPLFTVPLALVVG 170 Query: 186 KDHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 HP + L+ + + + E + +D +L G I M + E L Sbjct: 171 DHHPLVGSAGITLNELNEHELVMLSDEYNSRKMMDAILLANGITPRIVMEMNAIEPILAT 230 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 + +++ L V L + L + + + Sbjct: 231 VRHSSLATIL----SANLVDEMPGLHQVPL--------TPTVTHTVGLFTRRNSHLSAAA 278 Query: 305 VWLRETIKNLY 315 L +TI+ + Sbjct: 279 RALVDTIRQRF 289 >UniRef50_C7I2X4 Transcriptional regulator, LysR family n=1 Tax=Thiomonas intermedia K12 RepID=C7I2X4_THIIN Length = 313 Score = 240 bits (614), Expect = 5e-62, Method: Composition-based stats. Identities = 46/318 (14%), Positives = 97/318 (30%), Gaps = 25/318 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +DL L + +ER T+AA+R++V+ +S+ + L PLF G+ T Sbjct: 1 MDLRHLRYFVAVAEERHFTRAAQRLHVSQPPLSQQIQALETELGVPLFTRGRGGVQRTAA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQ-TPRGLKFELAAESPL-MMIMLNALSKQIYQRYPQ 125 ++ + + + + + + ++ L + +PQ Sbjct: 61 GDALLPLARSILDAVEHAVAQTRQVGRGETGRLAVGFAGSMPFTDVMPRLLRDFRAAWPQ 120 Query: 126 ATIKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 + LR +D + +D+GF + V+ + L Sbjct: 121 VALDLREQPSQSQIDDLLAHRLDLGFIR--------TTQLMHDPRLSTLVVQREPLLAAL 172 Query: 185 RKDHPALHQ-TWNLDTFLRYPHISICW--EQSDTWALDNVLQELGRERTIAMSLPEFEQS 241 DHP + + L+ P + + + G IA + E Sbjct: 173 HADHPLAARASLRLNDLRDQPFVIYSASLGAGLRQQTLALCAQAGFNPHIAQEVHEMPTL 232 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 + + + + + Q QL + + + L+W + + Sbjct: 233 IGLISAGLGVGI------VAASMQRAQL----PWVAYRPLADVQASTEVLLVWRRDDPQP 282 Query: 302 PKIVWLRETIKNLYASMA 319 P + K L A Sbjct: 283 P-LRNFIAQAKALLPQAA 299 >UniRef50_Q3MEY8 Transcriptional regulator, LysR family n=1 Tax=Anabaena variabilis ATCC 29413 RepID=Q3MEY8_ANAVT Length = 295 Score = 240 bits (614), Expect = 5e-62, Method: Composition-based stats. Identities = 48/312 (15%), Positives = 103/312 (33%), Gaps = 26/312 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L L +E KAA+R+++ +S+ + +L LF + + T Sbjct: 1 MELRHLRYFVTLAEELHFGKAAERLHIAQPPLSQQIRQLEIELGFDLFHRTKRTVRLTEA 60 Query: 68 MVSMEQNL-AEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + Q+ + + + S +L + + P Sbjct: 61 GQVFLGEVQQILQQLQQAIQLGQTSSRGEVGQLIVGFVSSAAYNILPIILRNFRACTPAV 120 Query: 127 TIKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 ++L D L+ + G +DIGF ++E +F + V L Sbjct: 121 KLELHEMTTDQQLEWLREGGIDIGFIRPPVEENI----------FNWETIFQESLMVALP 170 Query: 186 KDHPALHQ-TWNLDTFLRYPHISICW--EQSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 + H +Q L + I + ++ Q+ G +A + + ++ Sbjct: 171 ETHLLANQFNIPLTSLGNESFILFPRKIAPGLYDLIISLCQQAGFSPHVAQEAIQMQTTV 230 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 + A + +A P Q + + + Q+ +V + W K N +P Sbjct: 231 SLVAAD--MGIAIVPASLQNLQRTG--------VVYKNIQEATAKVALAMTWRK-NETSP 279 Query: 303 KIVWLRETIKNL 314 + T++ L Sbjct: 280 TLQRFLHTVRAL 291 >UniRef50_C6CWT6 Transcriptional regulator, LysR family n=5 Tax=Bacillales RepID=C6CWT6_PAESJ Length = 302 Score = 240 bits (613), Expect = 6e-62, Method: Composition-based stats. Identities = 46/310 (14%), Positives = 93/310 (30%), Gaps = 19/310 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L + + T+AA+ ++ PS V+ + L LF L+ T Sbjct: 1 MELRQLNTFCTVATTLNFTRAAEALSYVPSNVTMQIKALEEELGVRLFDRLGKQLALTTA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQAT 127 + ++ + H ++A + L + ++ ++P Sbjct: 61 GKRFLTHAQGVLEKLDEARSVVHDNAQLSGTLTISANEVICSYRLPPVFQRFRSQHPGVR 120 Query: 128 IKLRNWDYDSLDA-ITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRK 186 + R+ L + G DI + E L + + Sbjct: 121 LIFRSVPNQELKQTLFEGTTDIV---------YMLDEPICSSGLVVEPLVEENFRLLAAP 171 Query: 187 DHPALHQTW-NLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMA 245 DHP +T L+ F ++ D ++ G + + E Sbjct: 172 DHPLAKRTVLKLEDFHEEVFLTNEKGCPYRTMFDRSFEKEGIDSITYLEFQSAEAIKKC- 230 Query: 246 AQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIV 305 + +A P LV LP + Q +L HK +P ++ Sbjct: 231 -AISGIGIAFLPEIVVEAEVERG-ELVVLPWQIPDLQVYTQ-----MLRHKDKWLSPIML 283 Query: 306 WLRETIKNLY 315 E +N++ Sbjct: 284 SFIEATRNVF 293 >UniRef50_A6SUU1 OxyR hydrogen peroxide-inducible genes activator n=125 Tax=cellular organisms RepID=A6SUU1_JANMA Length = 331 Score = 240 bits (613), Expect = 6e-62, Method: Composition-based stats. Identities = 51/317 (16%), Positives = 100/317 (31%), Gaps = 30/317 (9%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 + L L + + +E+ AA+ V +S ++ KL LF +S TPL Sbjct: 17 MTLTELKYIVAVAREKHFGHAAEACFVAQPTLSVAIKKLEDELGVTLFERGGSEISMTPL 76 Query: 68 MVSMEQNLAEWMQMSNLLLDKP-HHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + ++ + + + ++ P F L + +L L K I +R PQ Sbjct: 77 GAQIVAQAERVLEQTAAIKEIAKQNKDPLVGPFRLGIIYTIAPYLLPPLVKTIIERVPQM 136 Query: 127 TIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + L+ L+ + +GE+D + + ++ + V + Sbjct: 137 PLVLQENFTVKLLELLRQGELDAAIVALPFP----------DQGLLVQPVYDEPFVVAVP 186 Query: 186 KDHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQEL--------GRERTIAMSLP 236 K H + + D + + + V E+ G R Sbjct: 187 KHHKWANRDSVSTDDLKSETMLLLGNGHCFRDQVLEVCPEMSRFSTSGDGIAR--TFEGS 244 Query: 237 EFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHK 296 E M A + + P+ Q L +P Q L+W K Sbjct: 245 SLETIRHMVAS--GIGITVLPQASIPDMQAKDGMLRYIPF-----TQPGPSRRVVLVWRK 297 Query: 297 RNSHNPKIVWLRETIKN 313 + I +R+ + + Sbjct: 298 SFTRGAAIEAVRQALLS 314 >UniRef50_C0F0J2 Putative uncharacterized protein n=1 Tax=Eubacterium hallii DSM 3353 RepID=C0F0J2_9FIRM Length = 297 Score = 240 bits (613), Expect = 7e-62, Method: Composition-based stats. Identities = 42/308 (13%), Positives = 94/308 (30%), Gaps = 20/308 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 + + + +E ++TKAAK++ +T VS ++ ++ + F L T Sbjct: 1 MSIRHFRIFIAVAEEENITKAAKKLYLTQPTVSVAIKEIEEHYGARFFERINQRLHITEE 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQAT 127 ++ M + + + + + A + + L ++ RYP Sbjct: 61 GKRFLDYAKHFIAMYDEMEIAFKNTD-FTGRLRVGASVNIGTYYIPRLIREFRDRYPGIN 119 Query: 128 IKLRNWDYDSLD-AITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRK 186 ++++ ++ + G++D+ G I E LF + Sbjct: 120 VQVKINTTAVVEKELLDGKLDLALVGGTIQSE----------HIVAEPLFYEKYTAICAP 169 Query: 187 DHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAA 246 +HP +T L+ F++ P +S + + + G T + Sbjct: 170 EHPMAGKTVPLEEFMKEPLLSREKSSGAYEVFQSAVNQTGLTVTPVWESTSQTTLMEAVH 229 Query: 247 QPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVW 306 L + P L + + +H +P I Sbjct: 230 --YGLGVTIVPEQMIKREVREG------RLSQITFSDFSFQNTIHIAYHHSKYLSPSIKK 281 Query: 307 LRETIKNL 314 +K L Sbjct: 282 FILLVKTL 289 >UniRef50_Q1AVR3 Transcriptional regulator, LysR family n=1 Tax=Rubrobacter xylanophilus DSM 9941 RepID=Q1AVR3_RUBXD Length = 305 Score = 240 bits (613), Expect = 7e-62, Method: Composition-based stats. Identities = 48/317 (15%), Positives = 103/317 (32%), Gaps = 26/317 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L + +E+S AA+R+ ++ +S + L LF + + T Sbjct: 1 MELRQLRYFVAVAEEQSFGGAARRLRISQPPLSLQIKALERELGVRLFDRNTRRVMLTDS 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQ-TPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + ++ + K E+ S + +L + +R+ Sbjct: 61 GRAFLERARVILEEVERAKETAKGAERGLLGKLEVGFVSSATLSLLPPAIRLFRERFGGV 120 Query: 127 TIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 ++LR +DA+ GE +G I E +F + V L Sbjct: 121 ELELRELTSAQQIDALYNGETRVGLVRLPLRAP----------GIHLEPVFEERLVVALP 170 Query: 186 KDHPA-LHQTWNLDTFLRYPHISICWE--QSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 HP +L+ P I + + + Q +G +A + + Sbjct: 171 SGHPLEALDRVSLEAIADLPLIFFTRQLIPGLHAQIIELFQRVGAFPNVAQHAVHLQTIV 230 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 + A + ++ P + +V LPL D++ L W + + + Sbjct: 231 GLVAS--GVGISILPSSAMRVRREG---IVYLPLDEDDATSW-----LGLAWVEGDD-SV 279 Query: 303 KIVWLRETIKNLYASMA 319 + ++ + S A Sbjct: 280 LVENFVSIVREVAQSEA 296 >UniRef50_A3K7Z5 Regulatory protein, LysR:LysR, substrate-binding n=1 Tax=Sagittula stellata E-37 RepID=A3K7Z5_9RHOB Length = 333 Score = 240 bits (613), Expect = 7e-62, Method: Composition-based stats. Identities = 46/301 (15%), Positives = 99/301 (32%), Gaps = 25/301 (8%) Query: 4 SITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLS 63 ++ ++L L + +E + T+AA+++ + +S+ + L L S +S Sbjct: 25 NLPRIELRQLRYFLAVAEELNFTRAAEKMGIAQPPLSQQILVLEQQLRVKLLNRSRRHVS 84 Query: 64 PTPLMVSMEQNLAEWMQMSNLLLDKPHHQ-TPRGLKFELAAESPLMMIMLNALSKQIYQR 122 TP + + + + + +AA + ++ L + + Sbjct: 85 LTPEGEAFILYARRIINNTQIAAELVGAIKRGEEGPLSVAAIFSSIYTVVPQLFEAFVAQ 144 Query: 123 YPQATIKLRNWD-YDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPC 181 +P+ L+ L A+ +D+G + I+ L + Sbjct: 145 HPRVRFHLQEMTIGQQLVALREERIDLGILRGPI----------IHPEIETHTLLEEPFV 194 Query: 182 VWLRKDHPALHQTW-NLDTFLRYPHI--SICWEQSDTWALDNVLQELGRERTIAMSLPEF 238 V + K HP QT D L P I + + + +VL I + + Sbjct: 195 VVVSKKHPLAKQTILTADQVLSQPLIRVIPSVNRDYSHQMFSVLANRNTTPNIVHEVSDT 254 Query: 239 EQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRN 298 L + A + ++ P + + QL + L ++ L W K + Sbjct: 255 HTLLGLVAA--GMGISMVPASVRSIH-TDQLRYIPL-------REGTPTSTIQLAWLKDS 304 Query: 299 S 299 Sbjct: 305 D 305 >UniRef50_A0LNI4 Transcriptional regulator, LysR family n=4 Tax=Deltaproteobacteria RepID=A0LNI4_SYNFM Length = 302 Score = 239 bits (612), Expect = 8e-62, Method: Composition-based stats. Identities = 54/311 (17%), Positives = 102/311 (32%), Gaps = 24/311 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +D++ L+ +++ S TKAA+ + +T VS+ + L + L + PTP Sbjct: 1 MDIHRLVVFCRVLEMGSFTKAAEAVCLTQPTVSEHVRALEETLGEKLIDRLGREVLPTPA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTP-RGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + Q + +Q+ + + + A + +L L + YP Sbjct: 61 GKILYQYARDIIQLRDEAVQALEKFKGNLSGALLIGASTIPGTYVLPELIGSFKKSYPAI 120 Query: 127 TIKLR-NWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 I LR + + G V+ G G I E FSD + + Sbjct: 121 QITLRITDSAEVVARTIDGGVEFGVIG----------ARLEDRRIVLEEAFSDELVLAVF 170 Query: 186 KDHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRER---TIAMSLPEFEQS 241 +DHP ++ +L+ P I ++ L+ G I + E Sbjct: 171 RDHPWAVRKSVSLEELAGEPFILRERGSGTRIVMNQALEAHGFSPTKLNIVAEMGSTEAI 230 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 + ++ + H L A+PL + PF L+ K + Sbjct: 231 RQGIKA--GIGISILSHRAVAEDLRHG-SLFAVPLA-----GIRFSRPFFLVQRKNRQMS 282 Query: 302 PKIVWLRETIK 312 P ++ Sbjct: 283 PLCSAFLNHLR 293 >UniRef50_C3KKF8 Putative transcriptional regulatory protein, LysR-family n=1 Tax=Rhizobium sp. NGR234 RepID=C3KKF8_RHISN Length = 304 Score = 239 bits (611), Expect = 1e-61, Method: Composition-based stats. Identities = 77/317 (24%), Positives = 133/317 (41%), Gaps = 21/317 (6%) Query: 4 SITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLS 63 +I ++DLNLL+ L+ E T+AA+RI +T AVS +L +LRA F DPLFV SP G+ Sbjct: 5 NIASIDLNLLVVFDALVAEGHATRAAERIGLTQPAVSHALNRLRALFGDPLFVRSPRGMV 64 Query: 64 PTPLMVSMEQNLAEWMQMSNLLLD--KPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQ 121 TP + + ++ ++L +F L ++L L+ ++ + Sbjct: 65 ATPAALDAAPAIRSILEQVEVVLSGGPAFEPEESTRQFVLGLSDYAAFVLLPRLTARLER 124 Query: 122 RYPQATIKLRNWDYDS-LDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 P ++ +RN + L + G V++ P + E+L+ + Sbjct: 125 EAPNISLVIRNTSHGVGLPMLEEGSVEL----------IAGNFPGPPSHMREELLYEEDF 174 Query: 181 CVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQ 240 R DHPAL +LD +L H+ + + +D VL E G +R +A+++ F Sbjct: 175 VCAGRGDHPALAYPLDLDRYLSLRHLQVSTRGNPHGYVDAVLAERGLKRKVAVTVGHFLM 234 Query: 241 SLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 + F+ D + R + L A P+ WH R+ Sbjct: 235 APFLVDSSDLVA-TEPRRLFEPMPSRLPLRFFAPPIDLP-------PFRVVQAWHARHEA 286 Query: 301 NPKIVWLRETIKNLYAS 317 +P WLR ++ + Sbjct: 287 DPGHQWLRRVLREISQR 303 >UniRef50_Q4ZQQ6 Regulatory protein, LysR:LysR, substrate-binding n=10 Tax=Pseudomonas RepID=Q4ZQQ6_PSEU2 Length = 304 Score = 239 bits (611), Expect = 1e-61, Method: Composition-based stats. Identities = 42/307 (13%), Positives = 88/307 (28%), Gaps = 23/307 (7%) Query: 10 LNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMV 69 L + L + + T+AA+ ++V+ A+S+ + +L + LF + + PT Sbjct: 15 LRHIRYLLAVADHGNFTRAAEALHVSQPALSQQIRQLESSLGVQLFDRTRRSVVPTDAGR 74 Query: 70 SMEQNLAEWMQMSNLLLDKPHHQ-TPRGLKFELAAESPLMMIMLNALSKQIYQRYPQATI 128 + + + + + L ++ L + YP I Sbjct: 75 VYLDHARRCLLELDAGKRALNDVSDLSRGQLRLGVTPTFSEYLIAPLIDRFSALYPGVAI 134 Query: 129 KLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKD 187 L + + +A+ +D+ SH ID + LF + C+ + K Sbjct: 135 ILTELPLEQITEALISDALDLAIGFAGSHAV----------EIDSQPLFDEQLCLVMAKP 184 Query: 188 HPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQ 247 L+ + + LD Q + I + L + AQ Sbjct: 185 ASEKQAALTLEDLQALRFALLAPGFATRQLLDAWCQMQNFKPIIGLEANSIAILLKVVAQ 244 Query: 248 PDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWL 307 P L ++ LL K + Sbjct: 245 GRM--ATILPDAIVRKQPG---------LCEVQTIPALPGRTVALLRRKNGYQSAAAKAF 293 Query: 308 RETIKNL 314 + + ++ Sbjct: 294 AKLVSDI 300 >UniRef50_B1Y5W5 Transcriptional regulator, LysR family n=2 Tax=Betaproteobacteria RepID=B1Y5W5_LEPCP Length = 316 Score = 239 bits (611), Expect = 1e-61, Method: Composition-based stats. Identities = 49/314 (15%), Positives = 89/314 (28%), Gaps = 23/314 (7%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 + T+ L + + S +AA+ +++TP AV+ + +L + + PLF +S Sbjct: 1 MKTVTFRQLRVFTEVARHLSFVRAAEALHLTPPAVTMQVKELESAIELPLFDREGRKVSL 60 Query: 65 TPLMVSMEQNLAEWMQMSNLLLDKPHHQTP-RGLKFELAAESPLMMIMLNALSKQIYQRY 123 T + D + + L + + Sbjct: 61 TTAGEYFLVYAKRLLSTLKEADDAMARFRKVESGVLSVGMVGT-AKYFVPQLLARFRIEH 119 Query: 124 PQATIKLRNWD--YDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPC 181 P +KL+ + + +GEVD+ GR + E + Sbjct: 120 PGIELKLQVGANREQLVALLQQGEVDLAIMGRPPREMAT----------RAEPFAAHPHV 169 Query: 182 VWLRKDHP-ALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQ 240 HP L YP I+ +D QE E IAM +P E Sbjct: 170 FIAPPGHPVLAQGRTTLSELASYPLIAREPASGTRALMDRFFQEHRVELRIAMEMPSNET 229 Query: 241 SLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 L + L L L + + + ++ + Sbjct: 230 IKQAVMAGMGLSFLSLHTI--------GLELRCGLLELVHVENAPIVRTWNIVHMQSRLL 281 Query: 301 NPKIVWLRETIKNL 314 +P LR + Sbjct: 282 SPAAEALRYFMLEH 295 >UniRef50_P0ACQ6 Hydrogen peroxide-inducible genes activator n=273 Tax=cellular organisms RepID=OXYR_ECO57 Length = 305 Score = 239 bits (611), Expect = 1e-61, Method: Composition-based stats. Identities = 35/313 (11%), Positives = 87/313 (27%), Gaps = 21/313 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +++ L L L + R +AA +V+ +S + KL L + + T Sbjct: 1 MNIRDLEYLVALAEHRHFRRAADSCHVSQPTLSGQIRKLEDELGVMLLERTSRKVLFTQA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKP-HHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + ++ +L + + + +L + ++Q +P+ Sbjct: 61 GMLLVDQARTVLREVKVLKEMASQQGETMSGPLHIGLIPTVGPYLLPHIIPMLHQTFPKL 120 Query: 127 TIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + L + L + G++D + LF + + + Sbjct: 121 EMYLHEAQTHQLLAQLDSGKLDCVILALVKESEA----------FIEVPLFDEPMLLAIY 170 Query: 186 KDHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 +DHP ++ + + + E G + E M Sbjct: 171 EDHPWANRECVPMADLAGEKLLMLEDGHCLRDQAMGFCFEAGADEDTHFRATSLETLRNM 230 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 A + P + + + + + L++ + + Sbjct: 231 VAAGSG--ITLLPALAVPPERKRDGVV------YLPCIKPEPRRTIGLVYRPGSPLRSRY 282 Query: 305 VWLRETIKNLYAS 317 L E I+ Sbjct: 283 EQLAEAIRARMDG 295 >UniRef50_C4V4C8 Transcriptional regulator n=2 Tax=Selenomonas RepID=C4V4C8_9FIRM Length = 298 Score = 238 bits (610), Expect = 1e-61, Method: Composition-based stats. Identities = 37/312 (11%), Positives = 94/312 (30%), Gaps = 25/312 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L Q+ + +++T+AA+R+ V+ ++ ++ KL + LF S LS TP Sbjct: 1 MELRQLEYFQMASRLKNITRAAERLRVSQPNITVAIKKLESELGIQLFDRSQKQLSLTPE 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + ++ + + + ++ + + + +RY Sbjct: 61 GAVFLERVEVALRNIQDAVLEVNDYKQLQKGTIKIGIPPMMGAYLFPKIFSSFQRRYSHL 120 Query: 127 TIKLR-NWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + L + + R E+D G ++ + + + Sbjct: 121 DVYLHEEGSVAIREQLERDELDFGII----------IIPESSPNLQLLPMTRSQIVCCVP 170 Query: 186 KDHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 +D + L I + + ++ G I + + + + Sbjct: 171 EDSELAERKAVTLQDIEGRNLIMLKEGSFLRQTMLQKMKAAGVSPNIVLESNQVVTIMGL 230 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 A + A + LPL + V L W + + Sbjct: 231 VAS--GVGDAFLLDMIAREAHG----IRTLPLAAP------VYVDVGLAWKRDRYISRAA 278 Query: 305 VWLRETIKNLYA 316 + ++ + Sbjct: 279 QSFIDFARDTLS 290 >UniRef50_C0Z4V5 Transcriptional regulator n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0Z4V5_BREBN Length = 298 Score = 238 bits (609), Expect = 2e-61, Method: Composition-based stats. Identities = 39/307 (12%), Positives = 102/307 (33%), Gaps = 22/307 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +D+ L +++ ++ TKAA+ ++V+ ++SK + L + L + + T Sbjct: 1 MDIRQLQYFVEVVKHKNFTKAAQSLHVSQPSISKMIKALEEELEVVLLDRTERKMDLTDA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTP-RGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + +Q+ + + +L + +L + ++YP Sbjct: 61 GEMVYSYATKVLQLMEGMASSIAELRNVERGRVKLGMMPTVGSFLLPNVIALFKKQYPGI 120 Query: 127 TIKLRNWDYDSLD-AITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 I+++ + L+ + +G +D+ + + L ++ + Sbjct: 121 DIEMKEYSAKLLEIQMEQGSIDVALTVLPMDQEK----------FEAVPLLAEDLVAIVH 170 Query: 186 KDHPALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 ++H +L+ I E + + + + G E +A ++ M Sbjct: 171 REHWLAGVDEVSLEQLKDEAFILFTEEYAMHDVVRHACKLSGFEPNVAYMSSLWDFVGEM 230 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 A L ++ PR QL V ++ + L++ K + Sbjct: 231 VATQ--LGISLIPRSIVRRLNNGQLHTV-------NISYPVIDWQYALIYRKEGYLSHAT 281 Query: 305 VWLRETI 311 + Sbjct: 282 KAFISFV 288 >UniRef50_Q5X4A2 Hydrogen peroxide-inducible genes activator n=4 Tax=Legionella pneumophila RepID=Q5X4A2_LEGPA Length = 296 Score = 238 bits (609), Expect = 2e-61, Method: Composition-based stats. Identities = 42/315 (13%), Positives = 92/315 (29%), Gaps = 33/315 (10%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L +L + +AAKR V+ +S + KL LF + + T Sbjct: 1 MNLRDLHYFVILADVKHFGEAAKRCFVSQPTLSMQIKKLEEELGVVLFERTNKQVLLTDQ 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQ-TPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + + + + + + P + L + ML + ++ YP+ Sbjct: 61 GSKLLDRTRKILILIDEMKELARQSEDPFTGELRLGVIPTVSPYMLPLVMPELKNEYPRL 120 Query: 127 TIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + L + + + +GE+D+ + ++L+ + Sbjct: 121 KVWLIEDKTHRLITKLEQGELDVAIMALP-----------IDKRFSCQILYEEKFYFACA 169 Query: 186 KDHPALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIA-MSLPEFEQSLF 243 HP ++ N++ P + + V Q + IA + E Sbjct: 170 NTHPLAQAKSVNINDLKNQPIMLLEEGHCLREQAMAVCQLAKAD-DIADFTATSLETLRL 228 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 M + + P + L + + L W Sbjct: 229 MVQA--GMGVTLLPALSTLTASTNHLKCIPF-------SEPAPSRILGLFWRAGTP---- 275 Query: 304 IVWLRETIKNLYASM 318 R+ N A + Sbjct: 276 ----RQVCFNAVAEL 286 >UniRef50_C6PMR8 Transcriptional regulator, LysR family n=1 Tax=Clostridium carboxidivorans P7 RepID=C6PMR8_9CLOT Length = 297 Score = 238 bits (609), Expect = 2e-61, Method: Composition-based stats. Identities = 41/306 (13%), Positives = 105/306 (34%), Gaps = 25/306 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++++ L + L + +S +KAA+ ++++ S++SK ++KL LF + + T Sbjct: 1 MNIDTLKYVLALAEYQSYSKAAEEMHISQSSLSKQISKLEGELGVKLFDRTTRHICLTVA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHH---QTPRGLKFELAAESPLMMIMLNALSKQIYQRYP 124 ++ A+ + + + + + L +L ++YP Sbjct: 61 GSEFLRHAAKILNDIDEAEKAMQEYCIIQ--RGELVIGTIPVICYFGLASLIVSFQKKYP 118 Query: 125 QATIKLRNWDYDSLDAITRG-EVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVW 183 +KL+ + L + + ++D F + + +D + Sbjct: 119 GIKLKLKEAETKLLIQLRKNLKIDAAFVTFTDDTELNST-------FELFPIITDHIVLV 171 Query: 184 LRKDHPALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 + HP ++ + +S+ T N ++ G I + + Sbjct: 172 TPQFHPLAAYKSVDFKDIANEKFVSMTNNSLATEIFINACKKAGFTPDIVYESDHIDMIV 231 Query: 243 FMAAQPDNLLLATA-PRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 L ++ + + + + + + +V L +K+ + L K N+ Sbjct: 232 GFV--SGGLGVSLLTSQIAKKFTKGNNIKIVNL--------NEKINITIALAIPKENNLT 281 Query: 302 PKIVWL 307 P I Sbjct: 282 PGIRTF 287 >UniRef50_A5D2L1 Transcriptional regulator n=1 Tax=Pelotomaculum thermopropionicum SI RepID=A5D2L1_PELTS Length = 303 Score = 238 bits (608), Expect = 2e-61, Method: Composition-based stats. Identities = 43/310 (13%), Positives = 87/310 (28%), Gaps = 24/310 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L L+ + +S TKAA+++ ++ AVS + L LF + T Sbjct: 1 MNLKQLEAFLLVAELQSFTKAARQLYMSQPAVSFQIKALEEDLQVALFQRGDKKVILTEA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + ++ + + A + +L L + ++YP Sbjct: 61 GRLLYPEAKQMLKHYQKIKVGLDDLRDLKKGHLVVGASTIPGEYLLPLLIGKFKEKYPGI 120 Query: 127 TIKL-RNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 I L + + E+D+G +G S ++ D + + Sbjct: 121 KITLKVSGSGQVGQWVREREIDLGITGAFIEGES----------LECRPWIDDQLVLIVN 170 Query: 186 KDHPALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERT---IAMSLPEFEQS 241 H P I + ++ L+E M L Sbjct: 171 PSHRWASLGAVQASELKNEPMIMREHDSGTRRTIEKKLKECNLSLEKIPQGMELGSTRAV 230 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 + L ++ RY + + + + HK+ Sbjct: 231 ITAVEA--GLGVSIVSRYAAREALELG------RVKEVQVTGLNMNRSLYQVRHKQGIEG 282 Query: 302 PKIVWLRETI 311 I E I Sbjct: 283 FAIRAFTEFI 292 >UniRef50_Q11BY5 Transcriptional regulator, LysR family n=1 Tax=Chelativorans sp. BNC1 RepID=Q11BY5_MESSB Length = 307 Score = 238 bits (608), Expect = 2e-61, Method: Composition-based stats. Identities = 50/321 (15%), Positives = 104/321 (32%), Gaps = 31/321 (9%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L +L +E +AA+++N+T S +S ++ L LF + + T + Sbjct: 1 MNLKQLQYFSVLAEELHFRRAAEKLNITQSPLSIAIQNLEQELGAKLFHRNQRSVQLTEV 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQ-TPRGLKFELAAESPLMMIML---NALSKQIYQRY 123 + + + + + +A +L L +++ Sbjct: 61 GRRLYDHAQGLISRLEHCEQDIRAIVNGKAGQLRIAF--TAASSLLSPFPKLISAFQKKF 118 Query: 124 PQATIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCV 182 P+ ++L++ + A++ G +DIG R +P I L +D V Sbjct: 119 PEIDVQLQSMTTVQQISALSEGTIDIGLLRRPRQS--------IPAEISTRRLATDRLVV 170 Query: 183 WLRKDHPALHQT-WNLDTFLRYPHISICW--EQSDTWALDNVLQELGRERTIAMSLPEFE 239 L HP ++ + + I + + G I E Sbjct: 171 ALPSGHPLTSKSVVAIPELAKEKFIFFPRKMGIGIYDQFIKLCGKWGFAPDIVQEAEEAT 230 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALP-LPFDESQQKKLEVPFTLLWHKRN 298 + + A L +A P L + +P L F + L + Sbjct: 231 TIVGLVAA--GLGVAVVP---------GGLRYIQIPNLEFRHIADEDAITELLLAFRTG- 278 Query: 299 SHNPKIVWLRETIKNLYASMA 319 N K+ L + +++ A Sbjct: 279 EANLKVQQLVHLAQQAFSTEA 299 >UniRef50_Q7W9G9 Probable LysR-family transcriptional regulator n=2 Tax=Bordetella RepID=Q7W9G9_BORPA Length = 296 Score = 238 bits (608), Expect = 2e-61, Method: Composition-based stats. Identities = 43/311 (13%), Positives = 96/311 (30%), Gaps = 26/311 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L + ++ T+AA R+ + +S + +L PL + P G++ T Sbjct: 1 MELRHLRYFVAVAEDLHFTRAAARLGIGQPPLSLQIQQLEREIGTPLLLRQPRGVALTEA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQT-PRGLKFELAAESPLMMI-MLNALSKQIYQRYPQ 125 Q+ + + L ++ + + + L + + RYP Sbjct: 61 GARFLQDARAVLHAAELAVETARRLGHGEQGDIAVGFTASAVFHPYLPSAIRAYRDRYPG 120 Query: 126 ATIKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 I L + L + GEVD+ F +L E + + V L Sbjct: 121 VRIALSESNARALLAGLRSGEVDVAFVRPP---------YALDDEFASERVLDEPMLVAL 171 Query: 185 RKDHPALH-QTWNLDTFLRYPHISICW--EQSDTWALDNVLQELGRERTIAMSLPEFEQS 241 DHP +T + + A+ Q G + P+ Sbjct: 172 PPDHPLCRKRTVPVAALAEQDFVLYPRPIGAGLYDAIMQACQRAGFTPRVIQEAPQMASI 231 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 + + A + +A P ++ + + + + + ++ + Sbjct: 232 ISLVAA--GVGIAVVPAAMRHMGAAG--------IVYRPIRGDAPRALLDMAYRRQ-PRS 280 Query: 302 PKIVWLRETIK 312 + E ++ Sbjct: 281 AAVRHAVELLR 291 >UniRef50_A0R3Z8 Transcriptional regulator, LysR family protein n=1 Tax=Mycobacterium smegmatis str. MC2 155 RepID=A0R3Z8_MYCS2 Length = 289 Score = 238 bits (608), Expect = 3e-61, Method: Composition-based stats. Identities = 39/310 (12%), Positives = 98/310 (31%), Gaps = 26/310 (8%) Query: 10 LNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMV 69 + L C +L +E +AA+R++V A+S+ + ++ LF+ + +S T Sbjct: 1 MRHLRCFVVLAEELHFGRAAQRLHVAQPALSQLIQRVERELGAQLFLRTRRTVSLTEAGQ 60 Query: 70 SMEQNLAEWMQMSNLLLDKPHHQ-TPRGLKFELAAESPLMMIMLNALSKQIYQRYPQATI 128 ++ ++ ++ + + +L L + +P +I Sbjct: 61 TLLPEARRILRDADRVTQAVRAVHRGETGSVTIGFVGSAADDVLPRLVAAHRRHHPGVSI 120 Query: 129 KLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKD 187 +L L+ + + +G + + VL + + + Sbjct: 121 RLEEGTTAQQLEWLRDQRITVGLGRTPIDDPA----------VSTVVLARESLVLAVPDS 170 Query: 188 HPALH-QTWNLDTFLRYPHISICW--EQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 H ++ L P I + + G ++ + + + Sbjct: 171 HALSGAESAELAGLAEEPFIMFPRHLGPGLYDIIHSACAAAGFTPSVVYETVRMQTIVGL 230 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 L +A P + + + V L + +++W +P + Sbjct: 231 V--SGGLGVALVPESVRNLGRK-GVRYVHL-------ADAPPAIELSMMWRNDCE-SPHL 279 Query: 305 VWLRETIKNL 314 LR+T ++L Sbjct: 280 QPLRKTARHL 289 >UniRef50_UPI00016945D8 transcriptional regulator, LysR family protein n=1 Tax=Paenibacillus larvae subsp. larvae BRL-230010 RepID=UPI00016945D8 Length = 292 Score = 238 bits (608), Expect = 3e-61, Method: Composition-based stats. Identities = 45/312 (14%), Positives = 101/312 (32%), Gaps = 25/312 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L Q + + + +TKAA+ +++ S++S+++++L LF + Sbjct: 1 MELLQLKYFQKVAKIQHMTKAAQELHIAQSSLSRTISRLEEDLGVSLFERKGRQIHLNMF 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + ++ + + A +L L K+ +P Sbjct: 61 GQRFLNRVERIFTELEEGTEEIAELQGIENKRVVVGATIT---RLLPDLFKEFLTVHPDV 117 Query: 127 TIKLRN-WDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 +L + + I +G +D S H I + ++ + + Sbjct: 118 KFQLFQFSTTEIQEQIQQGTIDFCISSPPIHQS----------GIVSIPIMTEEFFLAVP 167 Query: 186 KDHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 ++H +T L IS+ + S ++ ++ G + I + E + Sbjct: 168 QNHYLANRRTVKLSDIAEESFISLTMDYSFQESIYSLCIRSGFKPKIMFESNDLEVIGKL 227 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 D +A P Y N+ V P+ + L W +R + Sbjct: 228 V--TDGFGVAFMPAYWWKENK------VNSPVKIR-IDSPYYQRIIGLSWKERCYLSNVA 278 Query: 305 VWLRETIKNLYA 316 RE ++ Sbjct: 279 SDFREFTIQYFS 290 >UniRef50_Q0KE24 Transcriptional regulator, LysR-family n=2 Tax=Cupriavidus RepID=Q0KE24_RALEH Length = 305 Score = 238 bits (608), Expect = 3e-61, Method: Composition-based stats. Identities = 44/311 (14%), Positives = 93/311 (29%), Gaps = 23/311 (7%) Query: 7 TLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTP 66 L L + ++AA + +T AVS+ +A+L L + + T Sbjct: 2 NYTLRQLRVFLAVANTGGFSRAADVVGLTQPAVSRGVAELEEALGVRLLDRTTREVVLTE 61 Query: 67 LMVSMEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQIYQRYPQ 125 ++ L + + L++ R + +A + ++ +YP+ Sbjct: 62 AGHALAPALERLLGQLDDTLEETRQLGERYRGRVVIAGAPTISARLMPLYVAACAAQYPE 121 Query: 126 ATIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 + +R+ D L+ + G VD G + + E + +D C Sbjct: 122 IRLTVRDNVQADGLEQVRAGAVDFGVLIDP----------LVRDGLVVEPVATDPFCFVC 171 Query: 185 RKDHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 R+DHP + + + +D V G + L Sbjct: 172 RRDHPLAQSPSVPWAALHGMQLVLLDFASGSRPLIDRVFGRHGVVPLVVQELGHSASVFG 231 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 M + + P + L L E ++ + S +P Sbjct: 232 MVEA--GIGASVLPSFSLPLPAASPLVWRPL--------VPCEERSIVMVRREDRSLSPA 281 Query: 304 IVWLRETIKNL 314 + + ++ L Sbjct: 282 AAAVWDLVRRL 292 >UniRef50_B1HQK1 HTH-type transcriptional regulator n=3 Tax=Bacillales RepID=B1HQK1_LYSSC Length = 297 Score = 238 bits (608), Expect = 3e-61, Method: Composition-based stats. Identities = 41/313 (13%), Positives = 101/313 (32%), Gaps = 27/313 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +D+ L + + + +KAA+R++++ ++S ++ KL PL + L T Sbjct: 1 MDIKQLQYFIAVSEHMNFSKAAERLHISQPSLSNAIKKLEHEIGSPLLDRNTRNLQLTEA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHH-QTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + ++ +L + + + + L + + YPQ Sbjct: 61 GEVLFERAKVIVKNMEVLKKEMDEVVVHGTSEITIGVMESI-KHWLPKVIANYKKDYPQM 119 Query: 127 TIKLRN--WDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 I L + ++ + + + + ++ + L+ + L Sbjct: 120 MIHLVDILGSKRVKKSLKSYKTHLIITNQLMD----------DPELEVKTLYEERLVAVL 169 Query: 185 RKDHPALHQ-TWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 HP + T ++ P I + N ++ G+ I + FE ++ Sbjct: 170 PLHHPLAKKETLSISDISAEPFIISTEGFQTRRDILNTFEQAGKSIDIQFEIERFETAVS 229 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 + + L + P + E + L L++ K Sbjct: 230 LVREN--LGITILPENYLQGPTAKTIV-------KKEIEGANLCRNVYLVYLKNRHLPFA 280 Query: 304 IVWLRETIKNLYA 316 I R+ +K++ Sbjct: 281 I---RQLLKDVLQ 290 >UniRef50_Q7W708 Putative LysR-family transcriptional regulator n=2 Tax=Bordetella RepID=Q7W708_BORPA Length = 298 Score = 238 bits (608), Expect = 3e-61, Method: Composition-based stats. Identities = 42/298 (14%), Positives = 97/298 (32%), Gaps = 25/298 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +DL + + +ERS ++AA+R++++ +S+ + L + PLF P G+S T Sbjct: 1 MDLKQMRYFVAVAEERSFSRAAERLHISQPPLSQQIKALEEELNAPLFHRLPRGISLTAA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHH-QTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 ++ ++ + L + + S + ++ + Q+ + P + Sbjct: 61 GAALLKSSRAILANVRLAAQETTQIAAGMLGTVRMGTVSSALAHLVPYILTQVKRSMPGS 120 Query: 127 TIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 ++L + A+ R E+DIG + + + + Sbjct: 121 KVELTEMSSREQTLAVLRDELDIGLVHTPIDTA----------DLRTRQILREPFYAAVP 170 Query: 186 KDHPAL-HQTWNLDTFLRYPHISICWE--QSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 HP + + + + ++ G I + L Sbjct: 171 SQHPLASREAVPVAELASEEFVFFPRTLASGLFDKMVSLCMNAGFSPKIHHTARHQSTML 230 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 M A L + PR Q + + F + +L+W + ++ Sbjct: 231 QMVA--MGLGVTIVPRSLQRIYKGSAV--------FLPLTGTPHYLELSLIWRESTAN 278 >UniRef50_B9KVK0 Transcriptional regulator, LysR family n=1 Tax=Rhodobacter sphaeroides KD131 RepID=B9KVK0_RHOSK Length = 321 Score = 237 bits (607), Expect = 3e-61, Method: Composition-based stats. Identities = 45/313 (14%), Positives = 93/313 (29%), Gaps = 22/313 (7%) Query: 7 TLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTP 66 +DL L + +S AA I+++ A+++ + KL A L + +S T Sbjct: 15 NIDLEDLRAFVATAEMQSFRAAADSIHLSQPALTRRIQKLEATLGVSLLERTTRRVSLTA 74 Query: 67 LMVSMEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNALSKQIYQRYPQ 125 + + L R +A L + + +P Sbjct: 75 VGRDFLPRARRILDDLETSLLSVREIAERRSGLVSIACIPTAAYYFLPDVISAFTEEFPA 134 Query: 126 ATIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 ++ + + L +I E D G + LL + + ++ L + + Sbjct: 135 IRFRIFDAGANEVLQSILNREADFGIT----------LLGADDPDVTFDPLIEEPFLLAC 184 Query: 185 RKDHPALHQ-TWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 R+DHP Q + + +++ + +D L + SL Sbjct: 185 RRDHPLARQESVTWADLAAHRFVTVGRTSGNRLIMDLALARANVRPRSFFEVQHLSTSLG 244 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 + L +A PR + + L P + VP P Sbjct: 245 LVEA--GLGVAALPRMALPAGPHPSIVTLPLIEPRVTRTVGVVRVP-------GARRAPA 295 Query: 304 IVWLRETIKNLYA 316 + + + + Sbjct: 296 AEQFYQMLLSRWR 308 >UniRef50_Q7WNC1 LysR-family transcriptional regulator n=1 Tax=Bordetella bronchiseptica RepID=Q7WNC1_BORBR Length = 297 Score = 237 bits (607), Expect = 3e-61, Method: Composition-based stats. Identities = 40/313 (12%), Positives = 106/313 (33%), Gaps = 26/313 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L + L +E + T+AA R ++ + +S+++ L L + + + TP Sbjct: 1 MNLRHVHYFVTLAEELNFTRAAARCHIEQAPLSRAIKALERELGLTLLIRNTRNVELTPA 60 Query: 68 MVSMEQNLAEWMQMSN-LLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 ++ Q + +A + +L ++ + + YP Sbjct: 61 GRLFCDCARVALEELELGARRARRAQEGAIGQLTIAHVGSTVYELLPSIIRAFKRGYPLV 120 Query: 127 TIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 +++R + + + G++D+GF + L+++ + Sbjct: 121 DLRIRQLTTREQIPGLIAGDIDVGFVRVAPDSGQ----------LAAARLYAEPFVCAIP 170 Query: 186 KDHPALHQ-TWNLDTFLRYPHISI--CWEQSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 HP + + L P I + S + ++ ++ G E IA + + E ++ Sbjct: 171 DWHPLAGRESVALGELASSPFIMLMRSPAPSLHQQVLDLCRKAGFEPRIAQEVEQIESTV 230 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 + A + +A P + + + + +V + W + +P Sbjct: 231 GLVAS--GIGVALVPASLRKLSIRS--------VCYVPLCDVAEQVEVWVAWPRE-QASP 279 Query: 303 KIVWLRETIKNLY 315 + ++ Sbjct: 280 VAQAFLQCARDTL 292 >UniRef50_C1ZI46 Transcriptional regulator, COG0583 n=1 Tax=Planctomyces limnophilus DSM 3776 RepID=C1ZI46_PLALI Length = 292 Score = 237 bits (607), Expect = 3e-61, Method: Composition-based stats. Identities = 39/310 (12%), Positives = 99/310 (31%), Gaps = 22/310 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L+ L + +S T AA ++ ++S+ + KL PLF S G+ T Sbjct: 1 MELHQLRYFLKAAELKSFTLAAAECFISQPSLSQQIIKLEQELGQPLFERSGRGVELTES 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQAT 127 ++ + + + + + + + A + +L + + + P+ T Sbjct: 61 GKLLQSRAGQIVSLVDQARREITD-DGETGQLTIGAIPTIAPYLLPQIVSRFREVVPRVT 119 Query: 128 IKLRN-WDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRK 186 +K+ L + GE D+ + ++ E LF + + + Sbjct: 120 LKIHEDVTEQCLKKVQAGEWDLAIAALPVRI----------EHLEVEPLFDEELWLAVPP 169 Query: 187 DHPALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMA 245 H H ++ R + + T + + L + + + Sbjct: 170 GHRLSHLTEVPVEEIDRETLLLLGEAHCLTEHVAQYCRRKDMAPLETGRLAQLTTIMELV 229 Query: 246 AQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIV 305 ++ P C+ +++ + L Q + + L+W+ + Sbjct: 230 --SRGQGVSFIPNMCKAFDREGRCAYRPL-------QGDRPQRTIALVWNSYRFQTLLLK 280 Query: 306 WLRETIKNLY 315 + I+ Sbjct: 281 RALDVIRREL 290 >UniRef50_B8IJK2 Transcriptional regulator, LysR family n=1 Tax=Methylobacterium nodulans ORS 2060 RepID=B8IJK2_METNO Length = 306 Score = 237 bits (607), Expect = 3e-61, Method: Composition-based stats. Identities = 51/315 (16%), Positives = 96/315 (30%), Gaps = 30/315 (9%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +DL L +L ++R +AA+ +N+ +S+ + L + LF S + T Sbjct: 1 MDLRHLRYFVVLAEQRHFGRAAELLNMAQPPLSQQIKALEDELEVTLFDRSTRPIELTAA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNALSKQIYQRYPQA 126 ++ + + + + + M L + R+P Sbjct: 61 GRTLLREARQILHHVSRAQAATRRAGQGQDGHLVIGVTGSAAMEFLPPVLLAFRARWPDI 120 Query: 127 TIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + LR + + A+ RGE+ IGF L ++ ++ D V L Sbjct: 121 RLSLREMSSPEQIAALERGEIHIGFVRPPV----------LDDRLNVRLVHQDPFVVALP 170 Query: 186 KDHPALH-QTWNLDTFLRYPHISICW--EQSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 DHP + L I + +V + G S P+ L Sbjct: 171 GDHPQAGVEGVRLADLNGTALIIFDPAEAPGFRDLIIHVCRTAGYVPETLESAPQMTTML 230 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 + + L A PR + + F V +W + Sbjct: 231 ALVSA--GLGFALVPRSARRLALER--------VVFRPLLDPCAAVELYAVWSRDK---- 276 Query: 303 KIVWLRETIKNLYAS 317 V L E + ++ Sbjct: 277 -AVRLAEELVSVIDE 290 >UniRef50_C1SLV8 Transcriptional regulator, LysR family n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SLV8_9BACT Length = 298 Score = 237 bits (607), Expect = 3e-61, Method: Composition-based stats. Identities = 43/314 (13%), Positives = 92/314 (29%), Gaps = 26/314 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +DL L Q + + +VT+AA+ +N+ ++SK+++ L LF + Sbjct: 1 MDLLQLKYFQTVAKFENVTRAAEELNIAQPSLSKTISNLEKDLGVSLFDRPGRRIRLNKF 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + + + + A + +L + + + Sbjct: 61 GTAFLKRVQNSFSELEQGQKELMDMAGLEQGNINIGAS---IARLLPKMFSEFLNHHGNV 117 Query: 127 TIKLRN--WDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 +L D + G +D+ S + LF + + + Sbjct: 118 RFRLIQVINHLDLQQRLINGRIDLCISILPVEENK----------VHCTPLFDEEIFLAV 167 Query: 185 RKDHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 H + NL P I + + DN QE A E Sbjct: 168 MPKHRLAGRENINLKEIADEPFIRYAADSALRLITDNFFQEAEIIPDTAFECTTPEVICS 227 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 + + +A P + L V ++ + L W + + + Sbjct: 228 LVQ--NGFGIALIPASWWNLTGMDALVKV-------SIRKPVCKRTIWLSWMENHYLSQA 278 Query: 304 IVWLRETIKNLYAS 317 +E + + YA+ Sbjct: 279 ADKFKEFVIDYYAA 292 >UniRef50_B5XVV4 Transcriptional regulator cynR n=5 Tax=Enterobacteriaceae RepID=B5XVV4_KLEP3 Length = 313 Score = 237 bits (607), Expect = 4e-61, Method: Composition-based stats. Identities = 51/314 (16%), Positives = 105/314 (33%), Gaps = 24/314 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 + L L + + R T+AA ++V+ A+S+ + +L A + LF S T Sbjct: 1 MLLRHLSYFIAVAEHRGFTRAAAALHVSQPALSQQIRQLEAMLEVQLFDRSGRYTRLTDA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQ-TPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + ++ H + K +A +L L + Y+RYP Sbjct: 61 GEIWLEYARRVLRDLEEGRRALHDAEDLQRGKLRIAMTPTFTTYVLGPLVEAYYRRYPGV 120 Query: 127 TIKLRNWDYDSLD-AITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + ++ + + ++ + E+D+G + E SL I + L ++ + + Sbjct: 121 KLLIQEMNQERMETMLLEDELDVGIAFDE----------SLSRDIVVQPLLTETLALVVS 170 Query: 186 KDHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 + HP H++ L P I + E + +D + E + M L + Sbjct: 171 RAHPLAHESHLQLQALDAQPLILLSSEFATREQIDRYCRRHRLEPDVRMEANSIGAVLTV 230 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 L Y+ L + L L+ LL + + Sbjct: 231 IRGTL-LATLLPAAIAGQYDDLVAIELKP----------ALLQRTACLLQRQGAWQSAAA 279 Query: 305 VWLRETIKNLYASM 318 + + A++ Sbjct: 280 REFIALAREIAATL 293 >UniRef50_A0K8T5 Transcriptional regulator, LysR family n=55 Tax=Proteobacteria RepID=A0K8T5_BURCH Length = 308 Score = 237 bits (607), Expect = 4e-61, Method: Composition-based stats. Identities = 46/318 (14%), Positives = 97/318 (30%), Gaps = 26/318 (8%) Query: 6 TTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPT 65 T++L L + +E +AAKR+ ++ A+S + K LF + ++ T Sbjct: 7 DTVELRQLRYFVAVAEELHFGRAAKRLFISQPALSFDIRKFEDALGVQLFSRTNKTVALT 66 Query: 66 PLMVSMEQNLAEWMQMSNLLLD-KPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYP 124 + + ++ + + + ++ L ++ YP Sbjct: 67 NAGEVLLGEARRLLLQADEAERLTVRSASGLAGRLRIGFVHSMLYRGLPDAVRRFEADYP 126 Query: 125 QATIKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVW 183 + L + + AI RG++D+G P ++ ++++ Sbjct: 127 GVEVVLSEMNTHAQVQAIQRGQIDLG----------YAHWGHFPPEVESVAVYAEPFVCC 176 Query: 184 LRKDHPALHQT-WNLDTFLRYPHISICWE--QSDTWALDNVLQELGRERTIAMSLPEFEQ 240 L HP + L T P I + + G I ++ Sbjct: 177 LPAAHPLARRRQVALATLATEPFILFPRDAAPHYHDLIIAQCVNAGFSPLIRHEARLWQT 236 Query: 241 SLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 L M + +A PR Q L LPL + L + + Sbjct: 237 ILSMIE--FGMGIALVPRVLQQAKSD---RLAFLPLKDASLE----SRTLAL--KRSGTA 285 Query: 301 NPKIVWLRETIKNLYASM 318 P + ++ ++ Sbjct: 286 EPVALRFAGYVRASIDAL 303 >UniRef50_Q1ATU8 Transcriptional regulator, LysR family n=1 Tax=Rubrobacter xylanophilus DSM 9941 RepID=Q1ATU8_RUBXD Length = 301 Score = 237 bits (606), Expect = 4e-61, Method: Composition-based stats. Identities = 40/315 (12%), Positives = 95/315 (30%), Gaps = 24/315 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L + +E +AA+R+++ +S + +L A LF + + T Sbjct: 1 MELRHLRYFVAVAEELHFGRAARRLHIVQPTLSAQIQRLEAELGAQLFHRTKRSVRLTEA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHH-QTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + ++ S + + + ++ +L + +RYP Sbjct: 61 GKAFLVEARLALEHSERAVREARRMAASETGRLDVGFVPSATYSVLTDVVGLYRRRYPGV 120 Query: 127 TIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + R ++A+ G +++GF S S ++ + L Sbjct: 121 DLVPREMHSSVQVEALLEGSIEVGFLRLPSDHES--------DELEVRPFVREQLVAVLP 172 Query: 186 KDHPALH-QTWNLDTFLRYPHISI--CWEQSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 + H + L+ + E L V G +A E + + Sbjct: 173 RGHRLASLRRVPLEALAGESFLIPRREREPGYHEQLLEVCGTAGFVPKVAQETTELQVGM 232 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 + A + L A + ++ + L + E+ ++ W +P Sbjct: 233 ALTATGGYVGLFPAS---TRHVKMTGVVFKRL-------AEPVPEMELSVAWQSG-ELSP 281 Query: 303 KIVWLRETIKNLYAS 317 + + Sbjct: 282 ATRAFLGICEEVSGR 296 >UniRef50_B9TDR3 HTH-type transcriptional regulator xapR, putative n=1 Tax=Ricinus communis RepID=B9TDR3_RICCO Length = 301 Score = 237 bits (606), Expect = 4e-61, Method: Composition-based stats. Identities = 49/309 (15%), Positives = 105/309 (33%), Gaps = 19/309 (6%) Query: 7 TLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTP 66 ++DL L + +E+S ++AA+R++++ +S+ + KL + LF + T Sbjct: 2 SIDLKQLKYFLAVAEEKSFSRAAERLHISQPPLSQQIMKLESELGVKLFARTTRTFELTV 61 Query: 67 LMVSMEQNLAEWMQMSNLLLDKPHHQT-PRGLKFELAAESPLMMIMLNALSKQIYQRYPQ 125 ++ A+ + + +D + + M + +L ++ ++P+ Sbjct: 62 AGKALMSEAADLLARMRMTIDTIRQIDRGEVGRLRVGIVGSAMWGPIPSLLEEFQTKFPR 121 Query: 126 ATIKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 T L +A+ +VD+GF + E+ F + CV + Sbjct: 122 VTWTLHEMGPTLQYEALRAKQVDVGFWREPRIDDDVLKN----DNLRQELCFREDVCVAI 177 Query: 185 RKDHPALHQT-WNLDTFLRYPHISICWE-QSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 + HP Q L P +++ + S L + G + TIA E + L Sbjct: 178 NEHHPLAKQEAIELMDIAEEPMLTLALDKSSFPRYLMQCCVQAGFQPTIAQEATEPQTLL 237 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 M L +A P + + F + + + P Sbjct: 238 AMV--GAGLGVALMPETTS--------RIGWPGVVFVPIRSNPPSANLYITY-TTQDDAP 286 Query: 303 KIVWLRETI 311 + + Sbjct: 287 VVRAFLNIL 295 >UniRef50_Q4ZY05 Regulatory protein, LysR:LysR, substrate-binding n=1 Tax=Pseudomonas syringae pv. syringae B728a RepID=Q4ZY05_PSEU2 Length = 298 Score = 237 bits (606), Expect = 4e-61, Method: Composition-based stats. Identities = 48/310 (15%), Positives = 102/310 (32%), Gaps = 21/310 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L ++++ S ++AA +++T S+VSK++ L PL T Sbjct: 1 MNLRTLRTFVEVVRQGSFSQAADVVSLTQSSVSKAVKTLEDELGTPLLSRIGHRSELTAA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + + N LL + + + + A+ Q RYP Sbjct: 61 GEIVYRRALTLLAERNDLLTELNDLRGLKGGVLRIGLPPVGSGALFAAMFTQYRARYPDI 120 Query: 127 TIKLRN-WDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 I+L + + GEV++ + ++S DY+ + + V + Sbjct: 121 DIQLTEHGASKLHECLASGEVELA---------ALLKMNSFSEEFDYQDVRIEPVVVVMA 171 Query: 186 KDHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 ++HP + ++ P I + + G + + + + + Sbjct: 172 ENHPLAKRKRVVIEDLAETPFILFEAGFALNTMIKLACDRKGVTPKVTARSGQVDFIVDL 231 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 + L +A PR + + LVAL + + L W K +P Sbjct: 232 VSA--GLGVAFLPRMLAQKHYHDGIRLVAL-------NEPDTDWHMVLAWRKNAHLSPAA 282 Query: 305 VWLRETIKNL 314 + Sbjct: 283 EAWLALARET 292 >UniRef50_D2Q131 Transcriptional regulator, LysR family n=1 Tax=Kribbella flavida DSM 17836 RepID=D2Q131_9ACTO Length = 298 Score = 237 bits (606), Expect = 4e-61, Method: Composition-based stats. Identities = 43/308 (13%), Positives = 93/308 (30%), Gaps = 17/308 (5%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L ++ +E +V +AA R+++T ++S+ +A L LF T Sbjct: 1 MELRQLQSFVVVAEELNVGRAATRLHLTQPSLSRQIAALERDLGVELFARIRKRFVLTAA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHH-QTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 S+ + + ++ ++ + Q L +L L +PQ Sbjct: 61 GESLLADARDLLRRADDAVRDAQRTQRGELGTLRLRFVQSATFEVLPKLLGAFRDSHPQV 120 Query: 127 TIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + L ++A+ G +D+G + V+ D L Sbjct: 121 VLDLETMTTLRQVEALKDGRIDVGLLRLPEPGTQLGDTKPA-EGLASRVVSRDPLVAVLP 179 Query: 186 KDHPAL-HQTWNLDTFLRYPHISICWEQS--DTWALDNVLQELGRERTIAMSLPEFEQSL 242 HP + L + + ++ G +I + + + + Sbjct: 180 AKHPLARRRRIRLAELAAEDFVFYTRPSGPAVHDRIVGYCRDAGFTPSITQAAADVQTIV 239 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 + A + L AP + + E +L W N +P Sbjct: 240 SLVAAGLGVSLLIAPT----------PRTDPEAVVYRELSDDLPPWELSLAWSPDN-RSP 288 Query: 303 KIVWLRET 310 + + Sbjct: 289 VLQRFLQL 296 >UniRef50_C9YBM2 Putative uncharacterized protein n=2 Tax=cellular organisms RepID=C9YBM2_9BURK Length = 309 Score = 237 bits (605), Expect = 5e-61, Method: Composition-based stats. Identities = 46/316 (14%), Positives = 94/316 (29%), Gaps = 25/316 (7%) Query: 7 TLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTP 66 L+ L + +E KAA R++++ +S+ + +L LF + + T Sbjct: 12 RLETRQLRYFVAVAEELHFGKAAVRLHMSQPPLSQQIRQLEEGLGVTLFERTQRSVKLTY 71 Query: 67 LMVSMEQNLAEWMQMSNLLLDKPH-HQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQ 125 + +D + ++ ++ QRYP Sbjct: 72 AGQVFLAQARNALSKLEEAVDVVRAAARGEAGFLRCGYTAASAYAVIPSVMHAFKQRYPL 131 Query: 126 ATIKLRN-WDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 + LR D I G +DIG + E L + V + Sbjct: 132 VEVALRESLSGDQYRDIREGRLDIGLVRP----------FGALPDLATEKLIEENLIVAI 181 Query: 185 RKDHPALHQT-WNLDTFLRYPHISICWEQS--DTWALDNVLQELGRERTIAMSLPEFEQS 241 +HP Q ++ P + S ++N+L + + Sbjct: 182 PSEHPLAQQRIVDIHDLQSQPFVGFSSYGSQYFHDMVENLLGGEKVVPKLVQRATQPHAV 241 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 + + + L + ++H +V PL + L W + N + Sbjct: 242 IALVSAGLGLAIVP-----DASARVHMDRVVYRPLHASRLPRP----ELHLCWRREN-IS 291 Query: 302 PKIVWLRETIKNLYAS 317 P I + + + + A Sbjct: 292 PLISNFKASAREVAAQ 307 >UniRef50_P52696 Uncharacterized HTH-type transcriptional regulator ybhD n=68 Tax=Proteobacteria RepID=YBHD_ECOLI Length = 317 Score = 237 bits (605), Expect = 5e-61, Method: Composition-based stats. Identities = 43/317 (13%), Positives = 103/317 (32%), Gaps = 27/317 (8%) Query: 1 MKKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPL 60 MK ++++ +L + S AAK +N+T A+++ + K+ LF + Sbjct: 1 MKHELSSM-----KAFVILAESSSFNNAAKLLNITQPALTRRIKKMEEDLHVQLFERTTR 55 Query: 61 GLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTP-RGLKFELAAESPLMMIMLNALSKQI 119 ++ T + E ++ + L LA + L + Sbjct: 56 KVTLTKAGKRLLPEARELIKKFDETLFNIRDMNAYHRGMVTLACIPTAVFYFLPLAIGKF 115 Query: 120 YQRYPQATIKLRN-WDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSD 178 + YP +++ + ++++ E D G + + +ID+ L ++ Sbjct: 116 NELYPNIKVRILEQGTNNCMESVLCNESDFGI----------NMNNVTNSSIDFTPLVNE 165 Query: 179 VPCVWLRKDHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPE 237 + R+DHP + + Y I + + ++ L + + + Sbjct: 166 PFVLACRRDHPLAKKQLVEWQELVGYKMIGVRSSSGNRLLIEQQLADKPWKLDWFYEVRH 225 Query: 238 FEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKR 297 SL + L ++ P + + + L + + ++ K Sbjct: 226 LSTSLGLVEA--GLGISALPGLAMPHAPYSSIIGIPL-------VEPVIRRTLGIIRRKD 276 Query: 298 NSHNPKIVWLRETIKNL 314 +P + NL Sbjct: 277 AVLSPAAERFFALLINL 293 >UniRef50_Q67NJ1 LysR family transcriptional regulator n=1 Tax=Symbiobacterium thermophilum RepID=Q67NJ1_SYMTH Length = 311 Score = 237 bits (605), Expect = 6e-61, Method: Composition-based stats. Identities = 50/313 (15%), Positives = 103/313 (32%), Gaps = 24/313 (7%) Query: 6 TTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPT 65 +++ L L +++E S T+AA+ +N+T +V+K + L + LF + T Sbjct: 9 SSMLLQHLTTFCRVVEEGSFTRAAQVLNLTQPSVTKQVGALEDYLQVQLFTRQGKRVHLT 68 Query: 66 PLMVSMEQNLAEWMQMSNLLLDKPHHQT-PRGLKFELAAESPLMMIMLNALSKQIYQRYP 124 P+ + + + + + P + + + L L + +P Sbjct: 69 PVGELVYDYARQVIHLVQRCEEAVREYRSPGSGSVTVGCVHTIGLFTLPELLAAYVREHP 128 Query: 125 QATIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVW 183 + I ++ + +++ + GEVD+G + I+ LF D V Sbjct: 129 RVKINVKTGNNRETVTMLLHGEVDVGLVTTP----------QVHERIEVVPLFEDPLVVV 178 Query: 184 LRKDHPALHQ---TWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQ 240 + + P I D VL+E+G + M E Sbjct: 179 AGPS--FAADLPPVVSNADLAQLPFIGYVRGARFRMTTDQVLEEMGIQPQFVMEFDNHEA 236 Query: 241 SLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 M A +A P + LV L +P +L +L+ + Sbjct: 237 IKTMVA--LGFGIALEPVSAVQRELISG-QLVRLNVP----GLPRLSRTTSLILRRGERR 289 Query: 301 NPKIVWLRETIKN 313 + + ++ Sbjct: 290 SEAVRAFLSLLEQ 302 >UniRef50_A3VLP1 LysR family transcriptional regulatory protein n=1 Tax=Rhodobacterales bacterium HTCC2654 RepID=A3VLP1_9RHOB Length = 325 Score = 237 bits (605), Expect = 6e-61, Method: Composition-based stats. Identities = 38/321 (11%), Positives = 102/321 (31%), Gaps = 28/321 (8%) Query: 4 SITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLS 63 + ++L L + +E + T+AA+R+ + +S+ + L LF+ S + Sbjct: 6 DLPKVELRQLRYFLAVAEELNFTRAAERMGIAQPPLSQQIISLEHQLGAKLFIRSCRRVK 65 Query: 64 PTPLMVSMEQNLAEWMQMSNLLLDKPHHQT-PRGLKFELAAESPLMMIMLNALSKQIYQR 122 T + ++ + + L + + + L + + ++ + Sbjct: 66 LTAEGIELQAYARRIINTTMLATESIRSIANGKNGQIALGSVCSAIHSLVPHILPPFAAL 125 Query: 123 YPQATIKLRNWD-YDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPC 181 +P + L+ + A+ +DI + LF++ Sbjct: 126 HPGVRVHLQEMTVKEQFRALNEERIDIAIVREPMATT----------EFATQPLFTEPFV 175 Query: 182 VWLRKDHPALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQE---LGRERTIAMSLPE 237 + ++ P +L+ R P + + + ++ D++ G E + + Sbjct: 176 AAVNRNSPLARMNRLSLEQIAREPLVQV-YRSANREYSDHMFSALMEQGYELNVVCEASD 234 Query: 238 FEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKR 297 L + A + ++ P Q + V L +L W+ Sbjct: 235 MHSLLGLVAS--GIGVSLVPASLVNI-QTANVIYVPL-------SDDVQSSTLSLAWNPE 284 Query: 298 NSHNPKIVWLRETIKNLYASM 318 P + +++ + + Sbjct: 285 A-LTPSMDQFLKSVSDYMKGI 304 >UniRef50_A4XTW7 Transcriptional regulator, LysR family n=1 Tax=Pseudomonas mendocina ymp RepID=A4XTW7_PSEMY Length = 309 Score = 237 bits (605), Expect = 6e-61, Method: Composition-based stats. Identities = 48/308 (15%), Positives = 93/308 (30%), Gaps = 22/308 (7%) Query: 2 KKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLG 61 + L + + SVT+AA+ +++ +VS LAKL LF Sbjct: 5 RFHTRQTTFRQLETFLAVAEHLSVTEAARTLHLAQPSVSTQLAKLEQALQMELFEQLGKR 64 Query: 62 LSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQIY 120 L T ++ E + L + + L A ++ L Sbjct: 65 LYLTDAGREVQAGAREIFDALDRLEMRLAQLNGLTTGQLRLGAV-TTAKYLVPRLLGPFC 123 Query: 121 QRYPQATIKL-RNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 ++YPQ ++L D + + D+ + L ++ L + Sbjct: 124 RQYPQVEVQLNIANRSDVIRCLEDNRDDLYVFSQPPD----------HLDLECVALAENP 173 Query: 180 PCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFE 239 V H Q + + P +S A+++ G M++ E Sbjct: 174 LVVIAPAGHRLSGQRIRWEQLAQEPFLSREPGSGTRLAIEDHFARHGWPYKPHMTIASNE 233 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 A L +A R+ + + L V L + + L+ +R + Sbjct: 234 AIKESVAA--GLGIAILSRHTLIHTAVGNL--VELDVEDFPIAN-----QWYLVRWRRKA 284 Query: 300 HNPKIVWL 307 +P Sbjct: 285 LSPAAQAF 292 >UniRef50_Q12H69 Transcriptional regulator, LysR family n=14 Tax=Burkholderiales RepID=Q12H69_POLSJ Length = 342 Score = 237 bits (605), Expect = 6e-61, Method: Composition-based stats. Identities = 74/317 (23%), Positives = 126/317 (39%), Gaps = 12/317 (3%) Query: 4 SITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLS 63 + TLDLNLL +M ERS+T+AA+ +++T AVS +L +LR D L S G++ Sbjct: 29 NFRTLDLNLLRVFDEVMAERSLTRAARNLSLTQPAVSNALRRLRETLGDELVQRSGQGMA 88 Query: 64 PTPLMVSMEQNLAEWMQMSNL-LLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQR 122 PTP ++ + E +Q L+ F LA ++ L + + Q Sbjct: 89 PTPRARAIWPAVREALQRLQESLIPDEFVPGQATTTFVLAMADATAAELIPGLIETLEQE 148 Query: 123 YPQATIKLRNWDYDSLDAITRGEV-DIGFSGRES--HPRSRELLSSLPLAIDYEVLFSDV 179 P ++++ + + D+ S + S P+ + L+ Sbjct: 149 APGVSMRVIPLTTRDPRRLLDEQACDLAVGYFPSVLADLTAHAQSGEPMPFQHRRLYDGE 208 Query: 180 PCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFE 239 +RK HP LD F H+ + + +D L LGRER + +++ +F Sbjct: 209 YVCVMRKGHPLASGPLTLDRFCAARHMLVSFSGRPYGFIDESLASLGRERQVVLTVNQFF 268 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 + + A + L + + + QL L LP V +WH+R+ Sbjct: 269 TAGRVVANSNLLTV-LPRHFVRVTGIAEQLVLRPLPFDVSA-------VHVDAVWHRRSQ 320 Query: 300 HNPKIVWLRETIKNLYA 316 VWLRE + Sbjct: 321 QRGAHVWLREAVLRAAD 337 >UniRef50_Q12AP3 Transcriptional regulator, LysR family n=4 Tax=Burkholderiales RepID=Q12AP3_POLSJ Length = 303 Score = 237 bits (605), Expect = 6e-61, Method: Composition-based stats. Identities = 42/311 (13%), Positives = 99/311 (31%), Gaps = 24/311 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L L + + T+AA+R+++T S +S + +L + LF + T Sbjct: 1 MELRHLRYFVALAECLNFTRAAERVHITQSTLSHQIRQLEEEIGELLFERVGKRVLITER 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHH-QTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 A+ ++ + + K + + + + R+P Sbjct: 61 GELFLSYAAKALKEVDQGVAALKESARGLTGKLRIGSTHTFNQGFIPECIATLLVRHPTV 120 Query: 127 TIKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + + D + + + G +D+G S R + +E L+++ + + Sbjct: 121 KVAASEFTADDIGERLASGALDLGISYRP----------RTVGDLWFEPLYNEQMVLVVS 170 Query: 186 KDHPALHQ-TWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 HP + L R P + + + LD + E + + + L + Sbjct: 171 PQHPLAGRKRIRLVELHRQPLVLLPEAFATRAMLDECFRACDAEPLVVVEMNTLAPMLAL 230 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 + + A + L A+PL +LW + + Sbjct: 231 VERTQ-IG-AIVSENAVR----DRSTLRAVPLESPT-----PMRTPGILWKRDVDKTAPM 279 Query: 305 VWLRETIKNLY 315 ++ + Sbjct: 280 RAFASIVRAIA 290 >UniRef50_C6XZC9 LysR substrate-binding n=1 Tax=Pedobacter heparinus DSM 2366 RepID=C6XZC9_PEDHD Length = 300 Score = 236 bits (604), Expect = 7e-61, Method: Composition-based stats. Identities = 53/311 (17%), Positives = 114/311 (36%), Gaps = 26/311 (8%) Query: 6 TTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPT 65 ++L L+ ++L +E KAA+++ ++ SA+S+ + +L LF S ++ + Sbjct: 6 NQIELRHLVYFKMLAEELHYRKAAEKLFISQSALSQQIKQLEQLIQISLFDRSNKKVALS 65 Query: 66 PLMVSMEQNLAEWMQMSNLLLDKPHHQT-PRGLKFELAAESPLMMIMLNALSKQIYQRYP 124 S+ ++ + + L + + + M +L L K ++ P Sbjct: 66 ESGKSLYKDAVQVLNKVESALTNLELIKIGNTGQLRIGFVASAMQSVLPGLLKNFHKECP 125 Query: 125 QATIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVW 183 +L + + L A+ E+D+GF + + D ++ + + Sbjct: 126 NIKFQLDELNNREQLMALKNEELDLGFMRS----------NHVDAGYDIRSVYKETFSLV 175 Query: 184 LRKDHPALHQT-WNLDTFLRYPHISICWEQS--DTWALDNVLQELGRERTIAMSLPEFEQ 240 L ++HP +T N+ F P I +QS + N+ + G IA Sbjct: 176 LPQNHPINAETFINIGQFREEPFILFPNDQSQLYYQQIINLCADQGFAPKIAHRSIHAPT 235 Query: 241 SLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 + + ++ P + + F E ++ +W K+ S Sbjct: 236 IFKLVE--YGMGVSVIPTSLAHTENKE--------IKFIELKKITQRTELYAVW-KKKSQ 284 Query: 301 NPKIVWLRETI 311 NP + L E + Sbjct: 285 NPALPHLLEML 295 >UniRef50_Q3SGH4 Oxidative stress transcriptional regulator n=2 Tax=Proteobacteria RepID=Q3SGH4_THIDA Length = 301 Score = 236 bits (604), Expect = 7e-61, Method: Composition-based stats. Identities = 52/311 (16%), Positives = 89/311 (28%), Gaps = 20/311 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 + L L L L +AA+ +T S +S + KL + LF S ++PTP+ Sbjct: 1 MTLQELRYLVALADHGHFGRAAEACFITQSTLSTQIKKLEDFLGVTLFDRSLKRVTPTPI 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKP-HHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + Q + + + H Q P L L L +++++P Sbjct: 61 GREILQAARTIVDEAERIRTLAKHAQDPMTRTVHLGVIPTLGPYYLPHALTLVHRKHPGL 120 Query: 127 TIKLR-NWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + LR L+ + G++D G + E LF + L Sbjct: 121 RLLLREEMTPQILEHLADGKLDAGLLALPV----------TDEGLRVEPLFHEPFYAALP 170 Query: 186 KDHPA-LHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 DH + ++ + + + +V R E M Sbjct: 171 ADHALAAREALSVADIMAEKLLLLDEGHCLREQALDVCGARSSGREEV-RATSLETLRQM 229 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 L L P LV + L+W +R Sbjct: 230 V--GMGLGLTLLPALAVDAAPRQTRKLV----EIRPFRSPPPGRTIGLVWRRRAPFPETF 283 Query: 305 VWLRETIKNLY 315 L T+K Sbjct: 284 ERLAATLKASL 294 >UniRef50_P77559 Uncharacterized HTH-type transcriptional regulator ynfL n=179 Tax=Gammaproteobacteria RepID=YNFL_ECOLI Length = 297 Score = 236 bits (604), Expect = 7e-61, Method: Composition-based stats. Identities = 38/316 (12%), Positives = 101/316 (31%), Gaps = 26/316 (8%) Query: 7 TLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTP 66 ++L L + +E +AA R+N++ +S+ + L L + + T Sbjct: 2 NIELRHLRYFVAVAEELHFGRAAARLNISQPPLSQQIQALEQQIGARLLARTNRSVLLTA 61 Query: 67 LMVSMEQNLAEWMQMSNLLLDKPHHQ-TPRGLKFELAAESPL-MMIMLNALSKQIYQRYP 124 + + + M + + + + S + ++ + YP Sbjct: 62 AGKQFLADSRQILSMVDDAAARAERLHQGEAGELRIGFTSSAPFIRAVSDTLSLFRRDYP 121 Query: 125 QATIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVW 183 ++ R + + + G +D+G ++LP ++++ V+ + Sbjct: 122 DVHLQTREMNTREQIAPLIEGTLDMGLLRN----------TALPESLEHAVIVHEPLMAM 171 Query: 184 LRKDHPALHQT-WNLDTFLRYPHISICW--EQSDTWALDNVLQELGRERTIAMSLPEFEQ 240 + DHP + L + P + + +++ I + E Sbjct: 172 IPHDHPLANNPNVTLAELAKEPFVFFDPHVGTGLYDDILGLMRRYHLTPVITQEVGEAMT 231 Query: 241 SLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 + + + L ++ P + + +P+ ++ L+W K + Sbjct: 232 IIGLVSA--GLGVSILPASFKRVQLNE---MRWVPIA-----EEDAVSEMWLVWPKHHEQ 281 Query: 301 NPKIVWLRETIKNLYA 316 +P R + N Sbjct: 282 SPAARNFRIHLLNALR 297 >UniRef50_UPI000178A8A2 transcriptional regulator, LysR family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI000178A8A2 Length = 300 Score = 236 bits (604), Expect = 7e-61, Method: Composition-based stats. Identities = 41/310 (13%), Positives = 91/310 (29%), Gaps = 22/310 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L + +E ++AA+++ V+ VS+ + +L A LF + T Sbjct: 1 MELKQLQYFMAICEELHFSRAAEKMGVSAPNVSQQIRRLEAELGVLLFDRVGKTIVLTDA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + ++ A D + +M NAL +Q YP Sbjct: 61 GAILHEHAAAVFGHLQQAGDAIADLKQMQGGSLSIGVLPGDADLMFNALLLDFHQTYPTI 120 Query: 127 TIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRK 186 ++ L + + +DIG + + + LF + + + + Sbjct: 121 SLSLLE-TMKVTEQVLDRSIDIGVTIGPV----------IDERLTSIPLFHEEFSLAVHR 169 Query: 187 DHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMA 245 D P + L+ + + +D + G M L M Sbjct: 170 DDPLAGENFIPLNRLRSMNMVMFPPDHQCRKLIDRFCMDNGFAVQPHMVTTTLSSLLQMV 229 Query: 246 AQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIV 305 + PR + ++ +V L + L++ + Sbjct: 230 QS--GVGACVLPRLLLDNLRNTEIKVVHL-------RNPTPSQDICLIYRSDRFMGYAMR 280 Query: 306 WLRETIKNLY 315 + ++ Sbjct: 281 TFIKNLRAYI 290 >UniRef50_P96725 Uncharacterized HTH-type transcriptional regulator ywqM n=3 Tax=Bacillus RepID=YWQM_BACSU Length = 293 Score = 236 bits (604), Expect = 7e-61, Method: Composition-based stats. Identities = 44/312 (14%), Positives = 92/312 (29%), Gaps = 22/312 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L+ + + T AK +N S+V+ + L PLF L T Sbjct: 1 MELKQLITFITAAEHVNFTLTAKMLNYAQSSVTSQIKSLEEEIGTPLFERLGKRLILTEA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQAT 127 + + + + ++ + ++ A L + K+ Q +PQ Sbjct: 61 GKTFKSYAQKIIALTEEAKMATNQVRETTGTLKIGATESQCTYRLPPIIKEFKQAFPQVK 120 Query: 128 IKLRN--WDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + + + + + + +G++DI F ++ + A+ E L D + Sbjct: 121 LIFKPYISNEQAKEQLLQGQLDITFI---------LDVNRMEDALHVESLIQDEIKMVAA 171 Query: 186 KDHPALHQ-TWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 DHP L + S +N L + G + E Sbjct: 172 NDHPFPADLPVTLKDLQNETLLLTEDGCSYRTLFENNLHDSGIYPN-KLEFVSIEAIKQC 230 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 + + P + + L Q L WHK + + Sbjct: 231 VMAGLGIGI--LPEMTVKDDIAAG-RMKEL-----NWQSDCPVFT-QLAWHKDKWMSAPL 281 Query: 305 VWLRETIKNLYA 316 + + + Sbjct: 282 KAFIDLTRKTFK 293 >UniRef50_Q632J2 Transcriptional regulator, LysR family n=5 Tax=Bacillales RepID=Q632J2_BACCZ Length = 297 Score = 236 bits (604), Expect = 7e-61, Method: Composition-based stats. Identities = 34/309 (11%), Positives = 86/309 (27%), Gaps = 23/309 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +D+ L +++ER ++ AA+R++++ +S+ L + L + L T Sbjct: 1 MDMRQLRYFIAIVEERKISAAAERLHISQPPLSQHLKAMEDELGTKLMERNGKFLGVTEA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQT-PRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 ++ + + + + K + + L L + ++ YP+ Sbjct: 61 GKALYKYALQMNHLMEEAKMEVKEVGNGVSGKLTIGIN-TFSVSGLPDLLHRFHKEYPRV 119 Query: 127 TIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 T K+ + +++ L+++ Sbjct: 120 TYKVHQNESSHLCQLVRERVIEMAIIRLPLDL----------NDFSAIHLYTEPFYFITS 169 Query: 186 KDHPALHQTWNLDTFLRYPHISIC-WEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 + + L +P I + + + I + L + Sbjct: 170 NEKQLFNHQVTLADIQNHPLILPSTEGLGVHYMILEAFSKAQLHPNIIAECSDISLLLDL 229 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 A A P Q + + + L +L+W K + + Sbjct: 230 VACNFG--AAIVPETVINQYQNYNIQAF-------KITDTDLIASTSLIWLKNHYLSKAA 280 Query: 305 VWLRETIKN 313 E + Sbjct: 281 QNFIELLTE 289 >UniRef50_A4J6T9 Transcriptional regulator, LysR family n=1 Tax=Desulfotomaculum reducens MI-1 RepID=A4J6T9_DESRM Length = 299 Score = 236 bits (604), Expect = 7e-61, Method: Composition-based stats. Identities = 47/307 (15%), Positives = 106/307 (34%), Gaps = 24/307 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L+ L ++ ++++++ AA+ I++T A+SK L+ L A+F L G+S TP Sbjct: 1 MNLSTLQTFIVVAEKKNLSLAAQEIHITQPAISKQLSVLEAYFGTALVERKGRGVSLTPA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 ++ E ++ N + + + L A + +L + + YP Sbjct: 61 GELFYRHAREMLEQLNKAEREIRQMSGEIRGRMILWASTIPGHYILPPIIGTFKKEYPDV 120 Query: 127 TIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 L+ D +++ + + + I+ FSD V Sbjct: 121 QTVLQIGDSKEAIRKLLEESAHLA----------AVGILPNNKRIEGIKFFSDELVVIAP 170 Query: 186 KDHPALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRE---RTIAMSLPEFEQS 241 DHP ++ + P + ++ L + G IA+ L Sbjct: 171 TDHPFAELNEVPIEKLAKEPLVWRELGSGTRSVVETFLTKGGLSTDKLNIALELGSTGAI 230 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 + ++ R+ Q + + + ++ L++ +R + + Sbjct: 231 VTAVEA--GAGVSVVSRWATLKEQALN------KIATLKIKDLPMQRDLFLVYPRRKNRS 282 Query: 302 PKIVWLR 308 P I Sbjct: 283 PMIDAFI 289 >UniRef50_C6J497 Transcriptional regulator n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6J497_9BACL Length = 306 Score = 236 bits (604), Expect = 8e-61, Method: Composition-based stats. Identities = 37/309 (11%), Positives = 85/309 (27%), Gaps = 21/309 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++ LL + ++ TKAA+R+ +T +S + L L T Sbjct: 1 MEHRLLEYFIAVGEDLHFTKAAERLGITQPTLSHQIRLLEQELGTALIQRIGKKNYLTQA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTP-RGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + ++ + + T + + + +L +++YP Sbjct: 61 GSILLEHARRVIYEVEQAKLEIGQITGVQRGQLRIGCS---GNHLLEDKLISFHRQYPGI 117 Query: 127 TIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + + ++ + ++D+G I LF + + + Sbjct: 118 ELTVLELATEETRAGLLANQLDLGVVFLPLQ----------DEHIVSRPLFDEALVLVVS 167 Query: 186 KDHPALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 H L+ + P + + LD E G E M L E + M Sbjct: 168 SQHAYAELPEVTLEQVAQLPLVLFPPKFYVRQLLDTACAEQGIEIRPVMELSTMESQVQM 227 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 Y + + + F + L++ + +P + Sbjct: 228 VIHHVG-GTVLPGSYARTLTSTN----RRSGITFIPLAEPVPHKNVGLVYRRSTFMDPTL 282 Query: 305 VWLRETIKN 313 + Sbjct: 283 QAFIRHLTE 291 >UniRef50_C0CQ02 Putative uncharacterized protein n=1 Tax=Blautia hydrogenotrophica DSM 10507 RepID=C0CQ02_9FIRM Length = 295 Score = 236 bits (603), Expect = 8e-61, Method: Composition-based stats. Identities = 51/310 (16%), Positives = 94/310 (30%), Gaps = 21/310 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L L + S TK A+ ++ +AV++ + L + PLF + + T Sbjct: 1 MNLRQLKYFVTLAETLSFTKTAQVFYISQTAVTQQIKSLESQLGVPLFRRTKRKVELTSA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPH-HQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 E ++ + + K T + + + + P Sbjct: 61 GAVFLPEAREILEKTQKAIVKTKLAYTGSSDTLRIGVVQGYEHSDMPEALHRFRAQNPNI 120 Query: 127 TIKL-RNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 +I + R+ D A+ +D+ F + I L + V+L Sbjct: 121 SISIFRSDASDLYCALQEIRLDVAF------NSRIAPGNLEDFNISSHTLATYPLMVFLH 174 Query: 186 KDHPALH-QTWNLDTFLRYPHI---SICWEQSDTWALDNVLQELGRERTIAMSLPEFEQS 241 HP + + +L P I L + + G TI +E Sbjct: 175 PSHPLVRKKECSLSDLNHEPLIFPDLRNDPSGYNKCLLDYFVQTGFVPTIVQESSNYEAI 234 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 L M A L +A P Y + + + + WH +HN Sbjct: 235 LLMVAAS--LGIAILPSYAHVLAHNLG------NITAIPLTGEISSLDIVIAWH-NQNHN 285 Query: 302 PKIVWLRETI 311 P I + Sbjct: 286 PTIQKFLSAV 295 >UniRef50_B7GI02 Transcriptional regulator, LysR family n=2 Tax=Bacillaceae RepID=B7GI02_ANOFW Length = 304 Score = 236 bits (603), Expect = 8e-61, Method: Composition-based stats. Identities = 43/315 (13%), Positives = 101/315 (32%), Gaps = 19/315 (6%) Query: 1 MKKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPL 60 M S ++L+ L + + + S TKA++ + S+V+ + KL FD LF Sbjct: 1 MMGSGRRMNLHYLHTFREVAKWNSFTKASEMLGYAQSSVTTQIKKLEEEFDVVLFERWGG 60 Query: 61 GLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIY 120 + T + + + + + + QT + + L + Sbjct: 61 KIKLTDAGAELLEYANKIISLIDEAKQNLSEQTELAGSLSIGTIESVAGFYLPPYLQAFK 120 Query: 121 QRYPQATIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 Q++ + + L+ + + G+ D+ ++ V+ + Sbjct: 121 QKHSKVNLLLQQNICNRLVKGVKEGKYDLAII---------LDEKREDPDLNVIVIKQEP 171 Query: 180 PCVWLRKDHPALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEF 238 + + DH ++ I S + N+ + + L Sbjct: 172 LVLVAKPDHRLTRLDKIDIHALGDEKLIVTEQGCSYREVIGNLYRNYNIRFEYTIELGSI 231 Query: 239 EQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRN 298 E A L +A P LV +P+P + ++ + L++H++ Sbjct: 232 EAIKRCVA--YGLGIAFLPLMAVEAELEKG-RLVRVPIP-----EAEIHLFLQLVYHRKK 283 Query: 299 SHNPKIVWLRETIKN 313 + + L + + Sbjct: 284 WLSQSLKQLINLLVD 298 >UniRef50_C4L1Y9 Transcriptional regulator, LysR family n=2 Tax=Exiguobacterium RepID=C4L1Y9_EXISA Length = 294 Score = 236 bits (603), Expect = 9e-61, Method: Composition-based stats. Identities = 37/309 (11%), Positives = 97/309 (31%), Gaps = 24/309 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++ + + + +S T+AA+ ++VT +SK++ L LF + T + Sbjct: 1 MEFREMQYFIAVARAKSFTRAAEALHVTQPTLSKTIRHLEQELGVELFDRQRRQIELTDV 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 ++ ++ L + T L + + + YP Sbjct: 61 GEALMLESELLIRQLEDLPNHVFDITNSKRGLIRLGLPPLIGSLFFTKFLTVFHSSYPNI 120 Query: 127 TIKLRNWDYDSLD-AITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 +++ +L+ A+ +GE+D+ + + + ++ +L Sbjct: 121 RVEITEAGGHTLEHALEKGELDVIATVLPTSST-----------FEETPFVTEELYAYLP 169 Query: 186 KDHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 + HP + L+ P + E S + ++ G + +++ Sbjct: 170 ERHPLASRKQLLLEELASEPFVLFTDEFSLHHVVRTACEQAGFTPRLIGESGQWDFLCMS 229 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 AQ + + PR ++ + + L ++++ L K Sbjct: 230 VAQGN--AVTILPRSIMQEMNIYGVKAILL--------KQRIPWQLGLATAKGRYLPYAT 279 Query: 305 VWLRETIKN 313 + Sbjct: 280 REFIRYLTE 288 >UniRef50_C6Q0M3 Transcriptional regulator, LysR family n=1 Tax=Clostridium carboxidivorans P7 RepID=C6Q0M3_9CLOT Length = 311 Score = 236 bits (603), Expect = 9e-61, Method: Composition-based stats. Identities = 43/322 (13%), Positives = 106/322 (32%), Gaps = 32/322 (9%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +D L + + +E++ +KAA ++ ++ ++S+ + K+ LF S L T Sbjct: 1 MDFRQLQYVLTVAEEKNFSKAAHKLFISQPSLSQYIQKIELELGTQLFDRSSSPLKLTFA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + + + L + + R + + ++ + + ++P Sbjct: 61 GELYIETAKNILDLKDQLYQQINDIANRKKGRVIIGLSPVRSTYIMPKILPIFHDKFPDI 120 Query: 127 TIKLRNWDYDSLDAIT-RGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + L +L+ + +G DI +D+E +FS+ V + Sbjct: 121 EVVLIEDISSTLETLAVKGSTDIDLITTPMKNDM----------LDFETIFSEEILVVIP 170 Query: 186 KDHPALHQ------------TWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAM 233 +HP + T L P I + +Q ++ ++ G I + Sbjct: 171 PNHPIQSKIKYKTSAKSTHPTIELKELKNEPFILLKRDQKLHKMATSLCEQAGFSPRIIL 230 Query: 234 SLPEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLL 293 E + +A + + P +Q PL + + + + Sbjct: 231 ESESIEAAHALAKA--GMGITFVPDTLISAHQTEPYPL------YCSIDKLRPTRDVIVA 282 Query: 294 WHKRNSHNPKIVWLRETIKNLY 315 + K + +K ++ Sbjct: 283 YKKGRYLSVAAKEFISILKTVF 304 >UniRef50_A9BVL3 Transcriptional regulator, LysR family n=3 Tax=Comamonadaceae RepID=A9BVL3_DELAS Length = 299 Score = 236 bits (603), Expect = 9e-61, Method: Composition-based stats. Identities = 38/317 (11%), Positives = 95/317 (29%), Gaps = 26/317 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L +L +E ++AA+R++++ +S ++ +L LF + + T Sbjct: 1 MELRQLRYFLVLAEELHFSRAAQRLSISQPPLSVAIRQLEEELGAQLFERTSKEVRLTAA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHH-QTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + M+ + + + L + L + R+P Sbjct: 61 GKHLRVQAQDIMEQAQRVRQDMRAIADGVQGRIRLGFVGSAIYRGLPEALESFRARHPLV 120 Query: 127 TIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 I + + + + + +D+G + + L S+ L Sbjct: 121 RIDMLELNSAEQIAGLQQERLDLGLL----------HATRPAPGLQSHTLVSEPFMACLP 170 Query: 186 KDHPALH-QTWNLDTFLRYPHISICW--EQSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 H +T + + + + Q G + + + L Sbjct: 171 AGHALAGQRTLQVRQLAGERMVLFSRQVSPDYHQQIWQICQSEGFTPDLHHEVRHWLSVL 230 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 M + ++ P Q + L F Q + + +WH + P Sbjct: 231 SMV--SLDQGVSLVPSCLQ--------RVGFPGLAFVPIQGRHPQSQMQAMWHPGHVQ-P 279 Query: 303 KIVWLRETIKNLYASMA 319 + L +++ + Sbjct: 280 LVESLLAHLRDSVRRLG 296 >UniRef50_Q826F8 Putative LysR-family transcriptional regulator n=2 Tax=Streptomyces RepID=Q826F8_STRAW Length = 296 Score = 235 bits (602), Expect = 1e-60, Method: Composition-based stats. Identities = 52/309 (16%), Positives = 105/309 (33%), Gaps = 25/309 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L + +E S T+AA+R++V S VS ++ L LF + + T Sbjct: 1 MELRQLEHFIAVAEELSFTRAARRLHVVQSGVSAAIRSLERELGCALFERTSQQVRLTGA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQ-TPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 ++ + + D + A + + ++ L AL Q++ R+P Sbjct: 61 GAALLPEARATLHAAQAAQDAVRAAQDTLRGTVNVGAMASVEVVDLPALLGQLHARHPAI 120 Query: 127 TIKLR---NWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVW 183 ++LR A+ G++D+ F H P ID L + + Sbjct: 121 DVRLRLATTGSAGLAHALLSGDLDVAFLSLPEHK---------PAGIDARELATVPLVLV 171 Query: 184 LRKDHPALHQ-TWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 + DHP + L P + + +D G R +A+ +P+ + Sbjct: 172 VSADHPLAQRGEVALADLAAEPFVDFPPGYGNREVVDRAFAGAGVVRRVALEVPDIDMGA 231 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 + L +A P + + L ++ + L L + Sbjct: 232 ALVRH--GLGIAFLPAFAV--ARTPGLHVLDV-------HGTMLRWSMHLGTSSTRRPSS 280 Query: 303 KIVWLRETI 311 + L + + Sbjct: 281 ALRALLDLV 289 >UniRef50_B2I0F8 Transcriptional regulator n=13 Tax=Acinetobacter RepID=B2I0F8_ACIBC Length = 293 Score = 235 bits (602), Expect = 1e-60, Method: Composition-based stats. Identities = 33/309 (10%), Positives = 95/309 (30%), Gaps = 22/309 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 + L L L + + A+ ++++ SA+S ++ L LF + + T Sbjct: 1 MTLKQLKAFLALARTLNYANASLELHLSQSALSLTIKSLEEELGGKLFNRNTRRVELTQE 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKP-HHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 S+ + + + + + +A+ + +L + Q +P Sbjct: 61 GKSLIPYAKKLLANWDEMENDVKQRFKLNRGTLSIASMPFVTHAILPEVIHQFLAVHPNL 120 Query: 127 TIKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + + + ++ + G ++G L ++++ LF + L Sbjct: 121 NFSIHDIPNETIIEKVQDGIFELGICFEP----------DLTEGLEFKPLFEEDFLALLP 170 Query: 186 KDHPALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 K HP + P +++ + ++ + + + Sbjct: 171 KSHPLAQSSSITWHELCSNPFVTLQKPSIVRYLVEQNCLRNNITLDLKVECHQISSLSSF 230 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 A + ++ PR+ + L+ L + + + +++ K + Sbjct: 231 VA--YGIGVSAIPRHFAKHIDKEHNVLIDL-------KDEAIHKTVGIVYKKNFEISNIS 281 Query: 305 VWLRETIKN 313 E + Sbjct: 282 AQFIEALVQ 290 >UniRef50_A1WRQ7 Transcriptional regulator, LysR family n=2 Tax=Burkholderiales RepID=A1WRQ7_VEREI Length = 299 Score = 235 bits (602), Expect = 1e-60, Method: Composition-based stats. Identities = 58/312 (18%), Positives = 100/312 (32%), Gaps = 21/312 (6%) Query: 7 TLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTP 66 + L L L + RS T AA+ VT SAVSK A+L + PLF S ++P Sbjct: 2 NITLKQLRVFCALYELRSFTAAARAAFVTQSAVSKLCAELESEVGQPLFERSTRSVTPCE 61 Query: 67 LMVSMEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQIYQRYPQ 125 + + +AA +M +L ++ YP Sbjct: 62 GAADFYTYAQQILSTVRAAERSMSSLRSLERGIVGVAASPMVMYGLLGDPLASYHRNYPG 121 Query: 126 ATIKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 + L D ++ + G+VD+G E + +F D Sbjct: 122 IKLDLYELSTDETITYVRHGKVDMGIVSLEV----------KDAELATRPIFRDFMYAVC 171 Query: 185 RKDHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 DHP + + +Y HI + + ++D + ++L + + L Sbjct: 172 TSDHPLAQEEKVSWSELAKYDHIGLHSAYNVRRSIDRICEQLHLDIHFKIEASMVTSVLG 231 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 M L + P Y + + L LV + K V L+ + Sbjct: 232 MVRS--GLGITVVPGYICDFARHLGLVLVEI------RGAPKYPVELWLVQRTATRPSLA 283 Query: 304 IVWLRETIKNLY 315 L E ++ Sbjct: 284 ASALLECVEQQL 295 >UniRef50_Q46PT5 Transcriptional regulator, LysR family n=1 Tax=Ralstonia eutropha JMP134 RepID=Q46PT5_RALEJ Length = 300 Score = 235 bits (602), Expect = 1e-60, Method: Composition-based stats. Identities = 43/314 (13%), Positives = 88/314 (28%), Gaps = 23/314 (7%) Query: 7 TLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTP 66 + L L + + T AA ++++T SA S + +L + L S + T Sbjct: 2 NVTLRQLRAFVEVARSGGFTAAAPKLHLTQSATSLQIRELESQLGLQLIDRSTRRFALTD 61 Query: 67 LMVSMEQNLAEWMQMSNLLLDKPHHQTP-RGLKFELAAESPLMMIMLNALSKQIYQRYPQ 125 + + + R + +A L +L YP Sbjct: 62 AGSEFLISAMRIVGDVEQSVADTRELVHKRRGRITVATTPLLASTLLPESIAHFLDAYPA 121 Query: 126 ATIKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 T+++ + + + + G+VD GF D L V + Sbjct: 122 ITVRIADLPAEQIGRRVLSGDVDFGFGVFPEEDPQ----------FDRIPLLRHPLGVMV 171 Query: 185 RKDHPAL--HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 P + P I++ +D L + G + + ++ Sbjct: 172 PSSWPLATRKRDLVWSDLEGQPLIAMSHATGMRTLIDQQLHQAGVQVNPRFEVAYLGTAV 231 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 +A L + P Y ++ L + + L+ S +P Sbjct: 232 GLAEA--GLGVTVVPAYVGKLMGSDRVRFRPL-------HKPVVHRQIELIVRAGRSLSP 282 Query: 303 KIVWLRETIKNLYA 316 R+ + Sbjct: 283 SAAAFRDCLAARCK 296 >UniRef50_C0BY92 Putative uncharacterized protein n=5 Tax=Firmicutes RepID=C0BY92_9CLOT Length = 311 Score = 235 bits (602), Expect = 1e-60, Method: Composition-based stats. Identities = 40/314 (12%), Positives = 100/314 (31%), Gaps = 26/314 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++LN L L T AA+++++T ++S +++ L LF ++ T Sbjct: 16 MNLNQLHYFVTLAHMEHYTNAAQKLSITQPSLSHAISSLEEELGTSLFERQGRNVALTKY 75 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNALSKQIYQRYPQ- 125 + E + + + + K T K ++ + + + Sbjct: 76 GRLFMEYAEEALDILDAGIKKTRAMTSERSGKVDIGYIYTQGSEFIPEVISGFLEANRDK 135 Query: 126 -ATIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVW 183 N + ++ + + DIGF + +D+ + + Sbjct: 136 KVEFGFSNGVTKEIVEGVKEEKYDIGFCSMVTGE----------KELDFVPVSQEKLIAA 185 Query: 184 LRKDHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 + +HP ++ + YP I + + ++ G + I ++ E + Sbjct: 186 VPPEHPLAEKKSVRFEEIASYPQIFFNRGSGLRGVISQIFKDYGIKPDIVYTVDEDSAMV 245 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 + A+ + + P + ++ F E + ++ K P Sbjct: 246 GLVARGFGVGI--VPDAA---------TVRSMKASFLEIEDLDYRRFIYMVTLKNKYQVP 294 Query: 303 KIVWLRETIKNLYA 316 E +K+ Y+ Sbjct: 295 VAKAFTEYVKDYYS 308 >UniRef50_A1TN88 Transcriptional regulator, LysR family n=9 Tax=Burkholderiales RepID=A1TN88_ACIAC Length = 307 Score = 235 bits (601), Expect = 1e-60, Method: Composition-based stats. Identities = 43/311 (13%), Positives = 104/311 (33%), Gaps = 26/311 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L +L E +AA R+N++ +S ++ +L LF +P + TP Sbjct: 1 MELRHLRYFAVLADELHFGRAAARLNMSQPPLSVAIRQLEERVGAQLFERTPKEVRLTPA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHH-QTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 +++ + + + L + + + ++ L QR+P Sbjct: 61 GRALKASARRVLAQAEEALSEARGVAAGLAGRLRIGFVGAMLYRGLPQALGVFQQRHPGV 120 Query: 127 TIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + L+ + + + + +D+GF S +P + +L ++ L Sbjct: 121 RVSLQELNSGEQIGELLHDRLDLGFV----------HTSRMPATLQQRLLVTEPFLCCLP 170 Query: 186 KDHPALHQTW-NLDTFLRYPHISICW--EQSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 H + +L P + + ++ G + I + + + Sbjct: 171 AGHRLARRKVIDLRDLAGEPFVLFARAVSPDYHARILSICASAGFQPEIGHEVRHWLAVV 230 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 + +Q L +A P+ +++L + +S+ +W NP Sbjct: 231 SLVSQ--GLGVALVPQ-AMEHSRLPGAVFRPVGPAVAQSEA-------YAVWPA-APENP 279 Query: 303 KIVWLRETIKN 313 + L + Sbjct: 280 LVGDLMAILLA 290 >UniRef50_B5JV63 LysR protein n=1 Tax=gamma proteobacterium HTCC5015 RepID=B5JV63_9GAMM Length = 307 Score = 235 bits (601), Expect = 2e-60, Method: Composition-based stats. Identities = 43/311 (13%), Positives = 95/311 (30%), Gaps = 20/311 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +++ L L L + + +AA +V+ +S + KL + L + T + Sbjct: 1 MNIRDLQYLMALAEHQHFGRAADACHVSQPTLSTQIKKLEGELNVTLVERDNKKVMLTEV 60 Query: 68 MVSMEQNLAEWMQMSNLLLD-KPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 ++ + A+ ++ + + D P + L + +L + I +R+P Sbjct: 61 GNAVVERTADILRGVDEIRDIALQASDPESGRLALGLIPTIGPYLLPYAMRAIKKRFPDL 120 Query: 127 TIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 I L D +D + G++D ID ++++ L Sbjct: 121 RIYLYEAQTADLVDMLKSGKIDAAIMALPVD----------DDRIDNIPIYNEAFLAALP 170 Query: 186 KDHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 +HP ++ N + + V Q +G E M Sbjct: 171 FNHPLADRSLLNPSELKDSEMMLLEDGHCLRDQALEVCQNMGASEMSGFRATSLETLRQM 230 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 A + P NQ+ + +P + + + + + + Sbjct: 231 VAS--GAGVTLMPTLAAETNQIEGSDVAIVPFE-----EPQPQRQVGIFFRPSSPRKALF 283 Query: 305 VWLRETIKNLY 315 L + I Sbjct: 284 KELGQAIAERL 294 >UniRef50_C2FRR6 LysR family transcriptional regulator n=2 Tax=Sphingobacterium spiritivorum RepID=C2FRR6_9SPHI Length = 295 Score = 235 bits (601), Expect = 2e-60, Method: Composition-based stats. Identities = 44/313 (14%), Positives = 100/313 (31%), Gaps = 26/313 (8%) Query: 1 MKKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPL 60 M ++L L + L +E KAA +++++ SA+S+ + L LF Sbjct: 1 MISKTNQIELRQLRYFRALAEELHYHKAADKLHISQSALSQQIKLLEQQLGVSLFDRLNK 60 Query: 61 GLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQ-TPRGLKFELAAESPLMMIMLNALSKQI 119 +S + +Q +++ T ++ + M L K+ Sbjct: 61 KISLSDPGELFYAEAVRILQQVERSMERLDQFHTGSAGTLKIGFVASAMSSFLPEAIKKF 120 Query: 120 YQRYPQATIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSD 178 + YP ++ + + L A+ G++DIGF + + + +F + Sbjct: 121 HTAYPAIHLRFEEMNNFEQLPALENGDIDIGFMRS----------NQVRDQMHILRVFEE 170 Query: 179 VPCVWLRKDHPALHQTW-NLDTFLRYPHISIC--WEQSDTWALDNVLQELGRERTIAMSL 235 + L ++H + + +L I + + N+ + G I Sbjct: 171 TFTLILPRNHRFGNYHFKDLSILKDEDFILFPNAKSEFYFQQIINLCSDSGFYPRITHQA 230 Query: 236 PEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWH 295 + + ++ P + + + E + +W Sbjct: 231 IHGPTIFSLV--GCGMGISIIPTSLAQLHTEDVIAI--------ELKAIPQRTQIFAVWD 280 Query: 296 KRNSHNPKIVWLR 308 K N + P+I Sbjct: 281 KSNQN-PQIQRFM 292 >UniRef50_C1A9Z7 LysR family transcriptional regulator n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A9Z7_GEMAT Length = 296 Score = 235 bits (601), Expect = 2e-60, Method: Composition-based stats. Identities = 41/311 (13%), Positives = 100/311 (32%), Gaps = 22/311 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +D+ LL + + ++AA+RI + ++S + +L LF G++ T + Sbjct: 1 MDITLLRAFLEVADAGAFSRAARRIGIAQPSLSLQIQRLEQQLGTTLFERHGRGVALTDV 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKP-HHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + + + A + +L A +++ R+P A Sbjct: 61 GKGLYPRARRIVDDVRAAEEAVRREVAEGFGSITVGAIPTIAPYVLPAALERLQHRHPGA 120 Query: 127 TIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + LR +D + G +D+ + + + +VL S++ V + Sbjct: 121 RVVLREDYSAVLVDLLREGAIDVAIAALPYDFGT----------LPQDVLGSEMLLVAVP 170 Query: 186 KDHPALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 HPA + P +++ + ++ + M Sbjct: 171 ALHPAARAGKITVAQLQDAPTVTLDPVHCLGEQVAGFCDARQVNPSVVCRSAQLTTVFEM 230 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 + L+ P+ + + +V L LE LW + + + Sbjct: 231 V--GAGMGLSIVPQMAAAKHNTSRCAVVPL-------ADMALERDIIALWPRDRAPSKVA 281 Query: 305 VWLRETIKNLY 315 + + ++ + Sbjct: 282 MTFVDCVRQVV 292 >UniRef50_UPI0001C3192A transcriptional regulator, LysR family n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C3192A Length = 343 Score = 235 bits (600), Expect = 2e-60, Method: Composition-based stats. Identities = 52/300 (17%), Positives = 96/300 (32%), Gaps = 21/300 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L + +E S T+AA R++V VS + +L A + L S + PT Sbjct: 1 MELRQLEYFVAVAEEASFTRAAARLHVAQPGVSAQVRRLEAELGEQLLDRSGRSVRPTEA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 V++ + + + T + + S +L L + +P Sbjct: 61 GVAVLPHARAALASVGAVRGAIEELTGLVRGRVAIGMVSSYPSAVLPDLLASFSRLHPDV 120 Query: 127 TIKL-RNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 I L + + A+ GE+D+ G P + + L + + Sbjct: 121 EITLGEDNSDRLVQALQHGELDLALIGSARTGP--------PPGLATQTLTDEPLVAAVS 172 Query: 186 KDHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 HP T + P + + ALD+ G E IA + + Sbjct: 173 HTHPLATRSTLTVAALAGSPLMCLPRGTGIRTALDDACATAGVEPRIAFEASDPVPLALL 232 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 AA+ + + A +LH + L + + L W +P Sbjct: 233 AARGLGVAILPASLAAARSGELHAIAL----------TRPQPRGRIELAWRAEGPVSPAA 282 >UniRef50_C3I9W8 HTH-type transcriptional regulator alsR n=1 Tax=Bacillus thuringiensis IBL 200 RepID=C3I9W8_BACTU Length = 292 Score = 235 bits (600), Expect = 2e-60, Method: Composition-based stats. Identities = 40/308 (12%), Positives = 94/308 (30%), Gaps = 30/308 (9%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L + L +E + ++AA+++++ +SK + L LF + + T Sbjct: 1 MELRHIRYFLALAEELNFSRAAEKLHIAQPPLSKQIKDLEEEIGAKLFNRTKRHVELTNA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPH-HQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + T + + + ++ ++ +RYP+ Sbjct: 61 GQVFLDKSYQILDQVEQACISTRLTSTGTEGELVIGFSGSV-QDLIPT-IQRYRERYPKV 118 Query: 127 TIKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 I L+ + + ++DIG + I + + Sbjct: 119 GIVLQQLSTTIQVKNLIEKKIDIGILAAPINSSK----------IHVRPVKKVCLRAIIP 168 Query: 186 KDHPAL-HQTWNLDTFLRYPHISI--CWEQSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 + HP Q+ + P I N+ Q +G I + + + Sbjct: 169 EKHPLAIKQSIYIHDLENEPFIMATKSAAPFYYETFMNLFQSVGFAPKITVQANDLQTVS 228 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 + A + + +A P + L + + E+ +L W K N + Sbjct: 229 ALVA--NGMGVALLPSSINPLSG----------LIHRKVEDINTEIEASLAWRKDN-KSE 275 Query: 303 KIVWLRET 310 + E Sbjct: 276 LLEKFLEL 283 >UniRef50_A9G5G2 Nodulation protein D n=2 Tax=Proteobacteria RepID=A9G5G2_SORC5 Length = 366 Score = 235 bits (600), Expect = 2e-60, Method: Composition-based stats. Identities = 73/315 (23%), Positives = 140/315 (44%), Gaps = 18/315 (5%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 + ++DLNL+ L L+ ER +T+A KR+ +T SA S +L +LR F DPLFV + GL Sbjct: 61 HDVASVDLNLVRVLGALLDERHLTRAGKRLGLTQSATSHALGRLRRLFGDPLFVRTSRGL 120 Query: 63 SPTPLMVSMEQNLAEWMQMSNLL--LDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIY 120 +PT + + + E M+ + ++P F +A ++ L ++ Sbjct: 121 APTARAEELAEPVREAMRALDRCFRAEEPFVAASAARSFSVATADYGSFVLAPKLLDRLG 180 Query: 121 QRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 + P + LR D + + RG+ D+ + LP I +L+ + Sbjct: 181 REAPNVDLWLRALDASFEEQLARGDADVVVAPARRDG--------LPAGIHSRLLYRERF 232 Query: 181 CVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQ 240 +RK HP + + +L ++ H+ I + +D L +LG+ R +A+++P F Sbjct: 233 ACLVRKGHPLVKKGIDLASWTSMRHVFIAPRGTPGGVVDETLAQLGKRRRVALAVPHFLL 292 Query: 241 SLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 + + A D + + R + + ++ L +V P+ + WH+R+ Sbjct: 293 APHVVAGSDLV-VTVGARVAEAFAEILPLRVVDPPVKLP-------GFEVRMYWHERHHR 344 Query: 301 NPKIVWLRETIKNLY 315 +P W R+ ++ Sbjct: 345 DPAQQWFRDAVRGAA 359 >UniRef50_A6T413 Transcriptional regulator, LysR family n=1 Tax=Janthinobacterium sp. Marseille RepID=A6T413_JANMA Length = 302 Score = 235 bits (600), Expect = 2e-60, Method: Composition-based stats. Identities = 75/320 (23%), Positives = 134/320 (41%), Gaps = 23/320 (7%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 +I ++DLNLL+ +++ER+VT AA R+ V+ A+S +LA+LR F+DPLFV + G+ Sbjct: 1 MNIASVDLNLLVAFDAIVKERNVTSAAVRLGVSQPAMSNALARLRIIFNDPLFVRTSQGM 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLD--KPHHQTPRGLKFELAAESPLMMIMLNALSKQIY 120 PTP + + ++ ++ L F +++L L K I Sbjct: 61 QPTPYAEQLIEPVSRACELITSALQINSVFDPATTTKTFSFYMTEIGEILLLPKLLKHIQ 120 Query: 121 QRYPQATIKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 P A +++R +A+ GE+D+ L L + L++D Sbjct: 121 VAAPNACVRVRRIPEQGAKEAMANGEIDLAVG----------LFPYLKAGFYQQRLYTDK 170 Query: 180 PCVWLRKDHPALHQTWNLDTFLRYPH-ISICWEQSDTWALDNVLQELGRERTIAMSLPEF 238 +R+ HP +H + ++ PH I + A++ +L R I M+ F Sbjct: 171 FACIVRQGHPTVHDSLTPQQYVDTPHVIVMSANTGHDAAIEKILLTEHLRRKIVMTSQNF 230 Query: 239 EQSLFMAAQPDNLLLATAPRYCQYYNQ-LHQLPLVALPLPFDESQQKKLEVPFTLLWHKR 297 + Q D + R Q + ++ P+PF V WH+R Sbjct: 231 LVLPMIIEQTDAIA-TIPFRMAQKIASYSTGIKILESPIPFPN-------VDIKQHWHER 282 Query: 298 NSHNPKIVWLRETIKNLYAS 317 ++P W+R+ + L+ Sbjct: 283 FHYDPANKWMRDLMVTLFRE 302 >UniRef50_A5VFC0 Transcriptional regulator, LysR family n=2 Tax=Proteobacteria RepID=A5VFC0_SPHWW Length = 315 Score = 235 bits (600), Expect = 2e-60, Method: Composition-based stats. Identities = 48/324 (14%), Positives = 94/324 (29%), Gaps = 31/324 (9%) Query: 1 MKKSITT----LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFV 56 M +SI+ +DL L + E +AA+R+ ++ +SK + L LF Sbjct: 1 MPRSISQRNGSMDLRHLRYFLRVADEMHFGRAAQRLGISQPPLSKQIRALEDELGVKLFD 60 Query: 57 NSPLGLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESP-LMMIMLNA 114 + + T E ++ ++ + L + + + Sbjct: 61 RTSRRVRLTEAGRLFEPEARRALEQADRAARIARLAHSAEIGRLGLGFTTSGPFIPFVAR 120 Query: 115 LSKQIYQRYPQATIKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYE 173 + + YP + LR D ++ + ++DIG LP + + Sbjct: 121 ALHRFRRTYPDVELILREQGRDEQIEGVLSRQLDIGIVRDY-------RTPVLPDGVVAQ 173 Query: 174 VLFSDVPCVWLRKDHPALHQ--TWNLDTFLRYPHISICW--EQSDTWALDNVLQELGRER 229 L + + +R DH + + P + T + +E G Sbjct: 174 CLQQEEMILAVRDDHWLARRPQPPRIADLRDEPLVLYGPPNGTGFTEHFFALCEEAGFVP 233 Query: 230 TIAMSLPEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVP 289 IA L + + + Q +LH +V Sbjct: 234 KIAHEARSLATLLGLVSAGFGPTI-----IAQSMARLHVDNVVNRSFAAPSPS------S 282 Query: 290 FTLLWHKRNSHNPKIVWLRETIKN 313 L+ +P R TI Sbjct: 283 LWLVH--GEELSPTGAAFRRTILE 304 >UniRef50_B1Z4Z1 Transcriptional regulator, LysR family n=5 Tax=Proteobacteria RepID=B1Z4Z1_BURA4 Length = 313 Score = 234 bits (599), Expect = 2e-60, Method: Composition-based stats. Identities = 51/311 (16%), Positives = 105/311 (33%), Gaps = 22/311 (7%) Query: 7 TLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTP 66 DL L + +++ S KAA I+++ A+S+ + KL LF + ++ T Sbjct: 4 NFDLTDLQAFRAVVELGSFRKAADAISISQPALSRRIDKLEEALGVRLFERTTRSVTLTT 63 Query: 67 LMVSMEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNALSKQIYQRYPQ 125 + + + + ++ L + +A + L + ++R+P+ Sbjct: 64 VGRVFAPSAEQLLDDLDVALLGIRDVSSSRLGHVTIACVPSVAYYFLPNVIASYHRRFPR 123 Query: 126 ATIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 +KL + + L A+ GE D G S + S ID+++L + Sbjct: 124 IRVKLLDAGANEVLSAVISGEADFGVSF----------MGSQEPEIDFKLLLQERFVAAC 173 Query: 185 RKDHPALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 R+DHP + + Y ++S+ + LD L + L Sbjct: 174 RRDHPLARKKRVTWNELYEYEYVSVDKTSGNRLLLDQALTTVAPRAPSVCETRHVTTLLG 233 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 + L +A P + L V L + ++ ++ + P Sbjct: 234 LIEA--GLGVAAVPSMAMPGHDHPLLTSVPL-------VEPVVKRRVGIVKRRGRPLTPA 284 Query: 304 IVWLRETIKNL 314 I + Sbjct: 285 AEEFHRAIVDA 295 >UniRef50_Q0ARX0 Transcriptional regulator, LysR family n=1 Tax=Maricaulis maris MCS10 RepID=Q0ARX0_MARMM Length = 334 Score = 234 bits (599), Expect = 2e-60, Method: Composition-based stats. Identities = 65/316 (20%), Positives = 127/316 (40%), Gaps = 21/316 (6%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 S+ +DLNLL+ L ER+VT+AA+R+NV+ VS +L++LR F D LF+ +P G+ Sbjct: 4 MSLKHVDLNLLITFDALWHERNVTRAARRLNVSQPTVSNALSRLRLAFGDQLFLRAPRGI 63 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLD--KPHHQTPRGLKFELAAESPLMMIMLNALSKQIY 120 PT + +++ E ++ LD +F + + +L L + Sbjct: 64 EPTERCSEIIKDVREALRHIEQALDSGPAFDAKQCRREFHIGCADYFDLFVLPDLLAYMA 123 Query: 121 QRYPQATIKLRNWD-YDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 + P ++LR+ D + +D + GE+D + + + Sbjct: 124 EHAPMIDLRLRSVDIEEGMDLLDAGELDF----------MMHMEFPAAKRFGVRPVLHER 173 Query: 180 PCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFE 239 R HP + + ++ TF H++ +D VL LG R +A++ Sbjct: 174 HVFATRAGHPLVREAPDIATFASLSHVNFSQRGDSESPVDEVLARLGYRRRVAITTQHMT 233 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 + D + + R + + +P +++ P + W++R Sbjct: 234 TVAHLVKTTDLVA-SVPSRMAARMVEEGGFAVYPIPFQIEKA-------PVAVYWNRRFE 285 Query: 300 HNPKIVWLRETIKNLY 315 + + W+R+ I Sbjct: 286 LDGAMRWMRDAIIEFC 301 >UniRef50_C7H9N7 Transcriptional regulator, LysR family n=2 Tax=Faecalibacterium prausnitzii RepID=C7H9N7_9FIRM Length = 291 Score = 234 bits (599), Expect = 3e-60, Method: Composition-based stats. Identities = 48/307 (15%), Positives = 97/307 (31%), Gaps = 19/307 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L + + + S ++AA+ + + SAVS +A+L A + PLF + T Sbjct: 1 MELRTINTFLHIAELHSFSRAARELGYSQSAVSAQVAQLEAELETPLFDRVGKTVRLTDA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQAT 127 + + + +A + L L ++ + PQ Sbjct: 61 GQTFLTYARSLLATAEQAKAALQPARQVSGTLRVALADSVCSTFLPDLLQRYHALCPQVE 120 Query: 128 IKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRK 186 + LR D L + ++D+ ++ + + +L+ + CV Sbjct: 121 LVLRTATDDEMLQMLGSNQIDLAYTLDKPLLQPSFVLAVDEP---------EPICVVAPA 171 Query: 187 DHPALHQ-TWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMA 245 HP Q L + S ALD + G + L M Sbjct: 172 GHPLAGQAEVTLQELAGQEFLLTERGMSYRDALDQCMAAQGLAIKPFLELGSASLLCQMV 231 Query: 246 AQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIV 305 + L+ P Y L L +P + ++ L +H+ P++ Sbjct: 232 EH--GMGLSFLPEYIVQNALAAG-TLARLNVPACRVEMRRQ-----LFYHRDKWLTPQMK 283 Query: 306 WLRETIK 312 ++ Sbjct: 284 AFITLVQ 290 >UniRef50_B9IRL1 HTH_1, Bacterial regulatory helix-turn-helix protein, lysR family n=23 Tax=Bacillus RepID=B9IRL1_BACCQ Length = 310 Score = 234 bits (599), Expect = 3e-60, Method: Composition-based stats. Identities = 37/310 (11%), Positives = 95/310 (30%), Gaps = 26/310 (8%) Query: 7 TLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTP 66 +D+ L ++ +E+ +T+AA+R+++ +S+ L+ L LF + + T Sbjct: 20 DMDIRKLRYFIVIAEEKQLTRAAQRLHMAQPPLSRQLSLLEQELSVNLFERNGRNMYLTE 79 Query: 67 LMVSMEQNLAEWMQMSNLLLDKPHH-QTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQ 125 + + + + K + A + L+ + YP Sbjct: 80 EGNILYTKAKNIILQLEETITEIKDTGEGLRGKLSIGAFHSCIP-FLSEKIRYFQDNYPN 138 Query: 126 ATIKLRN-WDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 +K+ ++ + +++ + L + + + Sbjct: 139 VNLKIWEGGPSYLIEKLENRHIELAILRTPFNKDV----------FSSICLSKEPFVLVM 188 Query: 185 RKDHPALHQ--TWNLDTFLRYPHISICWE--QSDTWALDNVLQELGRERTIAMSLPEFEQ 240 H L P + + + S + + + LG IA P+ Sbjct: 189 PAKWELYHSHLPIPLTELSHIPLLLLHKDKENSYHQLVIDECKHLGITLNIACECPDSAF 248 Query: 241 SLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 L + + + P+ + + +V L + F + +++W K Sbjct: 249 ILMLIMT--GIGASILPKSAVSHIPQEFIKIVDL-IDFPYESES------SIIWLKGRKL 299 Query: 301 NPKIVWLRET 310 + + E Sbjct: 300 SKRAQRFIEC 309 >UniRef50_A8RPQ8 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=A8RPQ8_9CLOT Length = 296 Score = 234 bits (599), Expect = 3e-60, Method: Composition-based stats. Identities = 39/308 (12%), Positives = 91/308 (29%), Gaps = 21/308 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 + L + + S+T AA ++ + ++S +++++ ++ LF L T Sbjct: 1 MTFRHLKIFVTVCETGSMTAAASQLFIAQPSISLAISEMEDYYGVKLFDRISRKLYLTEN 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQAT 127 Q + + + + + ++ + +L K++ Q+YP Sbjct: 61 GRRALQYARHIIDLLDEMEQGVRDVDAM-GRLKVGTSITIGTYLLPGYIKKLKQQYPALK 119 Query: 128 IKLRNWDYDSLD-AITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRK 186 ++ + +++ I ++D+G +H I E D Sbjct: 120 VEASIANSGTIEQQILDNDIDVGIIEGVAHSPF----------ILSESFAGDRLVFICPA 169 Query: 187 DHPALHQTW-NLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMA 245 H +T L I + D +L + L Sbjct: 170 GHEFAGKTLEELSEVRNQDFILREKGSAGREIFDGILAAQELNVRPIWQSASNQVILQGV 229 Query: 246 AQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIV 305 L ++ P + + L + L +++++HK Sbjct: 230 KA--GLGISILPYFLVRQDIREG------ELAEFRIKDLALNRKYSVIYHKNKFLPRSAR 281 Query: 306 WLRETIKN 313 L E K Sbjct: 282 TLMELCKE 289 >UniRef50_C5BQI4 Transcriptional regulator, LysR family n=1 Tax=Teredinibacter turnerae T7901 RepID=C5BQI4_TERTT Length = 305 Score = 234 bits (599), Expect = 3e-60, Method: Composition-based stats. Identities = 44/311 (14%), Positives = 100/311 (32%), Gaps = 22/311 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +D+ L L + E+ V +AA+R++VT A+S+ L KL PLF G+ T Sbjct: 1 MDIKQLRYLVGIADEQHVGRAAERLHVTQPALSQQLRKLEEEIGSPLFERHHRGMRLTIA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQ-TPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 M ++ + + ++ + + ++ ++ + P Sbjct: 61 GQVMLKHARQILAQMEDARNEIDSLADTGECLVHIGTIQSMNFHLIPTAISRLQESEPNI 120 Query: 127 TIKLRNWDYDSLDA-ITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 +++ L+ + + ++D G ++ + E LFS+ + + Sbjct: 121 HVRVAELSGSQLEDSVAKEKLDFGIGFLP----------TIREDLVTEQLFSENFYLAVH 170 Query: 186 KDHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 + HP Q + + D I + Sbjct: 171 RSHPLAEQEVVDFKQLHGLSMALLTDRYISRRLFDTAALRASIRPKIKVETNTTASL--- 227 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 LL+A + + + + + L+ L+W K N + Sbjct: 228 ------LLIACVSQLAVVLPRAAIPEWIQSKVAMITLKNPTLQRSVGLIWGKNNVLTHQA 281 Query: 305 VWLRETIKNLY 315 + L +I++ + Sbjct: 282 LSLAASIRDCF 292 >UniRef50_C4Z2A4 LysR family transcriptional regulator, transcription activator of glutamate synthase operon n=1 Tax=Eubacterium eligens ATCC 27750 RepID=C4Z2A4_EUBE2 Length = 299 Score = 234 bits (598), Expect = 3e-60, Method: Composition-based stats. Identities = 40/312 (12%), Positives = 97/312 (31%), Gaps = 27/312 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +++ L L + R TKAA+ + +T ++S +++++ LF + ++ T Sbjct: 1 MNIYNLRYFVTLARIRQYTKAAEELCITQPSLSHAISQMEKELGVKLFEKNGHKITLTQF 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQAT 127 + + + + + L PL + + ++ ++ P+ Sbjct: 61 GEEFLSYAEKTLDVLDDGIASIKRSAMGNGTIRLGLVRPLGISYVPRMAAAFIKKNPKLD 120 Query: 128 IKL---RNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 I + LD + G+ D+ F + S E + + Sbjct: 121 IDFTFHTDVTGRLLDDMQLGKYDLLFCSKPSEE----------YHFTAEPVMKQRLVLIT 170 Query: 185 RKDHPAL---HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQS 241 K HP ++ NL Y ++ D +L+ +A E + Sbjct: 171 PKGHPLAKKRKRSINLAETAGYSYVCFDKNSGIRSIFDEMLKRSDITVKVAYETEEDQVI 230 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 + A + + + + + E + + E F ++ + Sbjct: 231 AGLVASGFGIAVVPYMDILEKMS-----------VEIFEIESPEYERSFYMVNDNSTYMS 279 Query: 302 PKIVWLRETIKN 313 P + R + Sbjct: 280 PAVETFRNFVIE 291 >UniRef50_Q5P743 Transcriptional regulator, LysR family n=2 Tax=Betaproteobacteria RepID=Q5P743_AZOSE Length = 301 Score = 234 bits (598), Expect = 3e-60, Method: Composition-based stats. Identities = 67/315 (21%), Positives = 121/315 (38%), Gaps = 20/315 (6%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 + TL++ L + + RSV++AA+ + + AVS +L KLR F DPLFV + G+ P Sbjct: 1 METLEIRQLSVFDEIYKTRSVSRAAENLGLGQPAVSIALGKLREHFGDPLFVRTSAGMEP 60 Query: 65 TPLMVSMEQNLAEWMQMSNLLLDKPHHQTP--RGLKFELAAESPLMMIMLNALSKQIYQR 122 TPL + + + + + P F +A +++L L +++ Sbjct: 61 TPLGEELAEPIRVAVAAVSAASGHRAEFDPTRARRTFRIAMTDISQLVLLPRLWERLRTV 120 Query: 123 YPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCV 182 P I + N ++ + GEVD+ L + LF Sbjct: 121 APGIHIDIANLSANTAGMLESGEVDVALGFMP----------QLEAGFYQQALFRQHYVC 170 Query: 183 WLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 HP + + L F H + + +D + +R + + +P F Sbjct: 171 MASATHPRIRRGLTLAQFEAEEHAVVSTSGTGHLIIDREIARQDIKRRVVLRIPSFVGIA 230 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 ++ + LL+ R + +L + +P P E WH R +++P Sbjct: 231 YVVERTA-LLVTIPQRLGELLADEERLRVYPVPFPLP-------EYAVKQHWHGRYNNDP 282 Query: 303 KIVWLRETIKNLYAS 317 WLR I+ L +S Sbjct: 283 GNRWLRALIQELLSS 297 >UniRef50_B2JVU4 Transcriptional regulator, LysR family n=43 Tax=Proteobacteria RepID=B2JVU4_BURP8 Length = 322 Score = 234 bits (598), Expect = 3e-60, Method: Composition-based stats. Identities = 52/311 (16%), Positives = 106/311 (34%), Gaps = 22/311 (7%) Query: 7 TLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTP 66 DLN L + +++ S KAA+ +N++ A+S+ + KL LF + ++ T Sbjct: 4 NFDLNDLQAFRAVVELGSFRKAAEAVNISQPALSRRIDKLEEALGVRLFERTTRSVTLTT 63 Query: 67 LMVSMEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNALSKQIYQRYPQ 125 + + + + ++ L + +A + L ++R+P+ Sbjct: 64 VGRVFAPSAEQLLDDLDVALLGIRDVSSSRLGHVTIACVPSVAYYFLPGAVASYHRRFPR 123 Query: 126 ATIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 +K+ + D L A+ GE D G S + S +++++L + Sbjct: 124 IRVKILDSSANDVLAAVISGEADFGVSF----------MGSQEPDVEFKMLLQERFVAAC 173 Query: 185 RKDHPALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 R+DHP + + + ++S+ + LD L + L Sbjct: 174 RRDHPLARKKRVTWNELYEHEYVSVDKTSGNRLLLDQALGAVSPRMPSVCETRHVTTMLG 233 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 + L +A P H L V L P + + + P Sbjct: 234 LVEA--GLGVAAVPSMAMPGRNHHILTSVPLVEPVVKRRVGIVRRR-------GRPLTPA 284 Query: 304 IVWLRETIKNL 314 +TI + Sbjct: 285 AQEFHKTIVEM 295 >UniRef50_C5BEX8 Transcriptional regulator, LysR family n=12 Tax=Enterobacteriaceae RepID=C5BEX8_EDWI9 Length = 312 Score = 234 bits (598), Expect = 4e-60, Method: Composition-based stats. Identities = 49/309 (15%), Positives = 97/309 (31%), Gaps = 23/309 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +D+ L ++++ S T+AA+++ VT +SK L L L + GL T Sbjct: 1 MDVRTLRYFVEVVRQHSFTRAAEKLFVTQPTISKMLRNLEEELGCTLLIREGRGLRLTDS 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + Q + L + +L + + L + QRYP Sbjct: 61 GNVVYQRAQTILDQFGQLRTELDDLGALKKGSLKLGIPPMVGTQ-MAGLIGEFRQRYPGI 119 Query: 127 TIKLRNWDYDSLD-AITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + + + +++ A+ GE+D+ + + AI LFS V L Sbjct: 120 ELHIAEFGGLTVEQAVLSGELDLALTAL---------SAQPDPAIASLPLFSHPLYVLLP 170 Query: 186 KDHP-ALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 + P + + + + + L G + IA+ +++ M Sbjct: 171 RQAPWLTRSALGMTDLAQQNILLYNEDFALYQQLMQAFSAAGVKPQIAVRSGQWDFLAAM 230 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 + +A P+ H L + L L L+W + Sbjct: 231 VQA--GVGIAILPQPICQRLDPHSLLWLPL--------APTLMWRLGLIWCHGRYLSHSA 280 Query: 305 VWLRETIKN 313 + Sbjct: 281 QAWIARCRE 289 >UniRef50_B0TNB6 Transcriptional regulator, LysR family n=19 Tax=Shewanella RepID=B0TNB6_SHEHH Length = 303 Score = 234 bits (598), Expect = 4e-60, Method: Composition-based stats. Identities = 52/321 (16%), Positives = 99/321 (30%), Gaps = 34/321 (10%) Query: 3 KSITT-----LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVN 57 + +D+ L L L+ S TKAA+R+N+ A+S+S+ +L L Sbjct: 1 MQLRKIDRVDMDIRQLKYLDALITAGSFTKAAERLNMAQPALSQSIKRLEQELGVTLVDR 60 Query: 58 ----SPLGLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIML 112 S LS T ++ Q+ ++ + +A L L Sbjct: 61 GANKSSKTLSLTAEGSALHQHAKLIIKNMAQAEAHIKSMANLTMGEVRVAVPGMLGSFYL 120 Query: 113 NALSKQIYQRYPQATIKLRN-WDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAID 171 R+P+ + L D+L + +VDI + L D Sbjct: 121 PRRLMAFRHRHPELKLSLFEGGTRDTLKMLQNEDVDIAII----------TANDLTDEFD 170 Query: 172 YEVLFSDVPCVWLRKDHPALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERT 230 +L + V + ++HP L+ F ++ + + ++LG Sbjct: 171 SHLLLQEQMVVAVGREHPLAKSDAVTLEEFFQHELVFFKPGYFHREWMLEQAEQLGLTAN 230 Query: 231 IAMSLPEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPF 290 IA + AQ + T + + A P + + Sbjct: 231 IAFETNLINLIKQVVAQE--YGITTVLEMVIEKHDN----ICAKPF------IPPIFLDL 278 Query: 291 TLLWHKRNSHNPKIVWLRETI 311 + W K+ + E + Sbjct: 279 HIAWKKQRPISQADRAFVEFL 299 >UniRef50_B7X0F3 Transcriptional regulator, LysR family n=1 Tax=Comamonas testosteroni KF-1 RepID=B7X0F3_COMTE Length = 307 Score = 234 bits (598), Expect = 4e-60, Method: Composition-based stats. Identities = 58/315 (18%), Positives = 116/315 (36%), Gaps = 24/315 (7%) Query: 1 MKKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPL 60 M+ + + L L + + RS T AA +++T SAVSK A+L + PLF + Sbjct: 1 MRMN---VTLRQLRVFCAVYERRSFTSAADDMHMTQSAVSKLCAELESEIGLPLFERTTR 57 Query: 61 GLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQI 119 ++P + + E + L + +AA +M +L + + Sbjct: 58 RVTPCDGAAELYEYAQEVLNTMRLAGRRLSALRTLDQGNLSIAASPMMMSGLLAPVIEAF 117 Query: 120 YQRYPQATIKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSD 178 + +P+ I L D S+D + G D G ++ ++ +V+ ++ Sbjct: 118 ARDHPKVRIDLHELTTDESVDYVRTGRCDFGLVS----------IAEHDPQLEPKVVCAE 167 Query: 179 VPCVWLRKDHPA-LHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPE 237 + C+ HP + YPHI++ S +D +L+ G E + Sbjct: 168 LLCLACTPSHPLAAKKRITWGEASDYPHITLRSVYSTRKTIDRILKAQGLELRSTIQAGT 227 Query: 238 FEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKR 297 SL + L + P Y + + Q L ++ + +K +LL + Sbjct: 228 LATSLRLVKAN--LGVTLIPSYAREFAQDLGLKVMEI------YDKKPYPHELSLLTRRG 279 Query: 298 NSHNPKIVWLRETIK 312 + + ++ Sbjct: 280 LKPSIAATAFMDALQ 294 >UniRef50_Q7W2A6 Transcriptional regulator n=3 Tax=Bordetella RepID=Q7W2A6_BORPA Length = 313 Score = 233 bits (597), Expect = 4e-60, Method: Composition-based stats. Identities = 81/318 (25%), Positives = 140/318 (44%), Gaps = 22/318 (6%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 LDLNLL+ ++ E VT+AA+R+ ++ SAVSK LA+LR F DPLF+ + G+ Sbjct: 1 MIAKHLDLNLLMIFDAILAEGHVTRAAERLAMSQSAVSKGLAQLRQAFGDPLFLRASRGV 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQIY 120 PT + + + + + N L R F + A + ++L L +++ Sbjct: 61 VPTHRALEIADQVRQAIAALNSLAGPVTEFDARSAHAHFNIGATDYVSFVLLPGLMRRLQ 120 Query: 121 QRYPQATIKLRNWDYDS-LDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 + P ++ L + + + + G+VD+ S ++S+ I + LF D Sbjct: 121 ETAPHVSLTLHDMESMMPEEMLLAGKVDLVISS----------VASVNFPIYRQELFRDH 170 Query: 180 PCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDN-VLQELGRERTIAMSLPEF 238 R HPAL ++ F+ H+++ + + LQ LG R +A+ +P Sbjct: 171 YVCLCRAGHPALADPVPIEQFVSSRHLAMPRQNGARERVLQDTLQRLGVTRDVAVQVPHM 230 Query: 239 EQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRN 298 D + A R + + H L ++A PLP + P + LWH R Sbjct: 231 LAIPATLTATDLVA-TMACRVAREFAARHPLQVLAHPLPLPD-------FPVSQLWHDRT 282 Query: 299 SHNPKIVWLRETIKNLYA 316 +P WLR+T+ +L Sbjct: 283 RRSPSHQWLRDTVYDLAR 300 >UniRef50_B5ELK2 Transcriptional regulator, LysR family n=2 Tax=Acidithiobacillus ferrooxidans RepID=B5ELK2_ACIF5 Length = 308 Score = 233 bits (597), Expect = 4e-60, Method: Composition-based stats. Identities = 42/324 (12%), Positives = 101/324 (31%), Gaps = 32/324 (9%) Query: 7 TLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTP 66 +L+L L + ++ ++AA+R+ ++ +S+ + L L V + ++ T Sbjct: 2 SLELRHLRYFIAVAEDLHFSRAAERLGISQPPLSQQIHTLEEMLGARLLVRTNRRVALTD 61 Query: 67 LMVSMEQNLAEWMQMSNLLLDKPHHQ-TPRGLKFELAAESPLMMI-MLNALSKQIYQRYP 124 + + + + +D + + M+ + + +P Sbjct: 62 AGEAFLKEARAILVQVDRAVDYVRSVERGEKGELHIGMTRSAMLAKQVPRAIFRFRTEFP 121 Query: 125 QATIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVW 183 + L + + +DA+ ++ +G + LP + +L++D Sbjct: 122 SVHLGLEELNSLEQIDALIHEKIQVGIMR----------VQHLPAMLQSHMLYADPLVAV 171 Query: 184 LRKDHPA------LHQTWNLDTFLRYPHISI--CWEQSDTWALDNVLQELGRERTIAMSL 235 L HP L + + I + + G I + Sbjct: 172 LPAKHPFCPISPTLSVPLDPAQLVHEQFIIFADSAGTGIRNQFYQICHDAGFNPRIVQEV 231 Query: 236 PEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWH 295 E + + A L + P Y Q + + +++ Sbjct: 232 QEASTMIGLVAA--GLGITILPVSYSYLQQDS--------VCYIPLSSPSARSDIHVVYR 281 Query: 296 KRNSHNPKIVWLRETIKNLYASMA 319 R H+P + L +K+ A+ A Sbjct: 282 CR-DHSPLLRQLLTILKSEAAAHA 304 >UniRef50_C3X7G6 Transcriptional regulator n=2 Tax=Oxalobacter formigenes RepID=C3X7G6_OXAFO Length = 291 Score = 233 bits (597), Expect = 4e-60, Method: Composition-based stats. Identities = 37/309 (11%), Positives = 90/309 (29%), Gaps = 25/309 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +D+ L + +E +++AA+R+++ +S L L L + LS T Sbjct: 1 MDIRQLRYFCAIAEEGQISRAAQRLHIAQPPLSYQLKLLEEELGVKLIDRNTRSLSLTKA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQT-PRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 ++ Q + + + + + + + + I + K+ +Q YP Sbjct: 61 GLAFYQRAEQILGLMKVAAIEARDVEYGVNGVLTIGSPPAIGNIYIPERIKRFHQEYPHV 120 Query: 127 TIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + R + L+ + ++ G + S + + L ++ R Sbjct: 121 RFQWREGNTYRILELLNADMIEFGIARLPVPMGSY----------ESKPLLTESWMAVSR 170 Query: 186 KDHP--ALHQTWNLDTFLRYPHISICWEQSD--TWALDNVLQELGRERTIAMSLPEFEQS 241 D P L+ P I + + + + ++ G + Sbjct: 171 NDDPKWIGKDNIGLEELEGIPLILMQRQAGIHCHDMVIDEMKNKGVNADVFCESDNISAI 230 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 L + + + + +L+ +LW K + Sbjct: 231 LSLVEAELGIAILPVSTLSVRPSG---------DFHAMAIANCQLQSSSAILWKKDKPLS 281 Query: 302 PKIVWLRET 310 E Sbjct: 282 AAAKLFLEM 290 >UniRef50_Q21S72 Transcriptional regulator, LysR family n=2 Tax=Comamonadaceae RepID=Q21S72_RHOFD Length = 317 Score = 233 bits (597), Expect = 5e-60, Method: Composition-based stats. Identities = 50/322 (15%), Positives = 98/322 (30%), Gaps = 35/322 (10%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 + L L + + +ER KAA+ V+ +S ++ KL D LF S ++ T L Sbjct: 1 MTLTELKYIVAVARERHFGKAAEACYVSQPTLSVAVKKLEEELDVKLFERSANEVTVTHL 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKP-HHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + ++ ++ + + + P L + +L L +Q+ PQ Sbjct: 61 GEEIVRQAQSVLEQASAIKEMAKRGKDPLAGPLTLGIIYTIGPYLLPDLVRQMISHTPQM 120 Query: 127 TIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + L+ L+ + GE+D + L+ + + Sbjct: 121 PLMLQENFTVKLLEMLRTGEIDCAILAEPFP----------DAGLAIAPLYDEPFLAVVP 170 Query: 186 KDHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVL--------QELGRERTIAMSLP 236 +HP QT + + + + + V G R + Sbjct: 171 ANHPLAAQTQVTTEQLKQETMLLLGSGHCFRDHVLEVCPEFARFSTNAEGIRR--SFEGS 228 Query: 237 EFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALP-------LPFDESQQKKLEVP 289 E M A + + PR L L + + + + Sbjct: 229 SLETIKHMVAA--GMGVTLVPRLSV---PKEALALKPRRKRDEDPYVKYLPFEGDPPKRR 283 Query: 290 FTLLWHKRNSHNPKIVWLRETI 311 L W + + I LR I Sbjct: 284 VVLAWRRSFTRYEAIAALRNAI 305 >UniRef50_B0N992 Putative uncharacterized protein n=2 Tax=Clostridium RepID=B0N992_EUBSP Length = 335 Score = 233 bits (597), Expect = 5e-60, Method: Composition-based stats. Identities = 46/312 (14%), Positives = 97/312 (31%), Gaps = 22/312 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 + L L + + S+TKAA +++ +VS + +L ++ LF G++PT Sbjct: 1 MTLRHLNIFVSVYEYNSITKAADALHIAQPSVSLVIKELEEYYGIQLFDRIGRGITPTEA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQAT 127 + + + N + + + + A + +L L K+ + +P Sbjct: 61 GKELYSYAIHIVSLFNEMAQRIKNWDNV-GTLRIGASITIGTHILPGLIKEYQKDFPYLR 119 Query: 128 IKLRNWDYDSLDA-ITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRK 186 IK+ +++ I ++DIG + I + D C + Sbjct: 120 IKVTVNKSATIEQHILDNKIDIGLIENQPD----------HPEILSQPFMKDNLCAIVPN 169 Query: 187 DHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMA 245 + P + L+ P + + LD + + Sbjct: 170 EDPLSSKAYITLEELASRPFLMREKGSAGREILDACFSLKNIHVNPLWESSSTQAIVKGV 229 Query: 246 AQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIV 305 NL +A P + + LP L +++HK ++ Sbjct: 230 --SMNLGVAVLPYLLIKRDIEEH-NVNYLPFKTP------LTRNLNIIYHKSKYLTRNML 280 Query: 306 WLRETIKNLYAS 317 K + S Sbjct: 281 SFIGLCKKVGRS 292 >UniRef50_C8KY54 Transcriptional regulator, LysR family protein n=1 Tax=Actinobacillus minor 202 RepID=C8KY54_9PAST Length = 327 Score = 233 bits (597), Expect = 5e-60, Method: Composition-based stats. Identities = 47/325 (14%), Positives = 103/325 (31%), Gaps = 39/325 (12%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 + + + +ERS + AAK++ ++ ++S+ + K+ PLF S L T + Sbjct: 1 MIFRQFKYVLKVAEERSFSHAAKKLFISQPSLSQFIQKVEEEVGAPLFDRSISPLKLTYI 60 Query: 68 MVSMEQNLAEWMQ---MSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYP 124 Q+ M +D + + ++ + +L + ++YP Sbjct: 61 GELYIQHAKAMMDLQCQFEQKIDDV--LNVKRGRVKIGSSPFRSAYLLPRVLPIFNEKYP 118 Query: 125 QATIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVW 183 + L+ + + + G++D+ S DYE LF + + Sbjct: 119 HIDVFLKEDSTKNLEEGVASGQLDLAISLLPVDE----------KRFDYEFLFEERMLLA 168 Query: 184 LRKDHPALH------------QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTI 231 + H + +L F P I + L + +++G I Sbjct: 169 IPPQHEIAQKLELKAGNYTDLKAVSLQDFADTPFIQMHKSHKLHRMLISECEKVGFTPHI 228 Query: 232 AMSLPEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFT 291 A+ + + + A P L + + KL Sbjct: 229 ALETESMTTAQAL--AGIGIGAALLPET---------LVIKNHVDKAPCYVELKLRRSAV 277 Query: 292 LLWHKRNSHNPKIVWLRETIKNLYA 316 +++ K + + +TIK Sbjct: 278 IIYRKESYLSRATRAFIQTIKQATQ 302 >UniRef50_B6FPK4 Putative uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FPK4_9CLOT Length = 301 Score = 233 bits (597), Expect = 5e-60, Method: Composition-based stats. Identities = 49/308 (15%), Positives = 108/308 (35%), Gaps = 21/308 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 + + L ++ Q+ S+TKA++ ++V+ +VS ++ +L ++ LF LS T Sbjct: 1 MTIRHLRTFVIVFQKESITKASEILHVSQPSVSLAIQELENYYHIRLFDRIGKRLSITEQ 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQAT 127 + + M + + + + + + +L L ++ +RY + Sbjct: 61 GKWLYDYALHIVSMFDEMETEVKTWNN-KGTLRIGSSITIGNFILPQLIEEFQKRYREVE 119 Query: 128 IKLRNWDYDSLDA-ITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRK 186 IK+ + +++ I EVD+ ++ I E L D C+ Sbjct: 120 IKVSVCNTKTIEQYILNNEVDLALIEGKTEYEQ----------IQMEHLMEDPLCLICAA 169 Query: 187 DHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMA 245 + + Q +L RYP I + ++ L + + + Sbjct: 170 NSELVKQEKISLIDLERYPMILRERGSAVREMIEESLGYHQIHHRVIWESVSTQAIIRAV 229 Query: 246 AQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIV 305 A+ L ++ P L + + ++ L F++ +HK+ P Sbjct: 230 AKK--LGISILPYLLVRDELARGL------VKQLQVEEFHLSRQFSIAYHKKKYLTPAAK 281 Query: 306 WLRETIKN 313 E K Sbjct: 282 GFMELCKE 289 >UniRef50_B9ZSB8 Transcriptional regulator, LysR family n=4 Tax=Bacteria RepID=B9ZSB8_9GAMM Length = 340 Score = 233 bits (597), Expect = 5e-60, Method: Composition-based stats. Identities = 44/312 (14%), Positives = 94/312 (30%), Gaps = 21/312 (6%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 I L L + +++ S T+AA+ +++T VS + KL PLF P Sbjct: 26 IRHATLRQLQVFEAIVRLGSFTRAAEELHLTQPTVSIQIKKLSTALGLPLFEYVGRKAFP 85 Query: 65 TPLMVSMEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQIYQRY 123 T + + + E + L K + LA ++ Q +RY Sbjct: 86 TEVGLLLYDTCREMLGALTNLEMKLAEMHGLKRGRLRLAVI-TTAQYFAPSILGQFARRY 144 Query: 124 PQATIKLRNWD-YDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCV 182 P + L + L+ ++ + D+ G + + + V Sbjct: 145 PDIELSLEVSNFDRVLERLSNNDDDLYIIGHVPERLT---------DVAVHPFAPNPLVV 195 Query: 183 WLRKDHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQS 241 +DHP + + L + + A + QE G + M L E Sbjct: 196 MASRDHPLVGRRNIPLKELEQETFLMREPGSGIREATLKLFQEHGISPPVRMELGSNEAI 255 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 + + + + P+ + + + + +++ K+ + Sbjct: 256 KQAVIGGLGIAVLSLHTLSAEGAEG--------PVALLDVEHFPIHRQWHIVYPKKKVLS 307 Query: 302 PKIVWLRETIKN 313 + Sbjct: 308 VVAQTFLDFAIQ 319 >UniRef50_Q13QG3 Transcriptional regulator, LysR family n=9 Tax=Proteobacteria RepID=Q13QG3_BURXL Length = 316 Score = 233 bits (597), Expect = 5e-60, Method: Composition-based stats. Identities = 75/323 (23%), Positives = 127/323 (39%), Gaps = 22/323 (6%) Query: 1 MKKSITTL-DLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSP 59 M KS + DLNLL + RS+T A +R+ +T AVS +L +LRA FDDPLFV +P Sbjct: 1 MSKSHPGITDLNLLRVFLAISDLRSLTAAGERLGLTQPAVSHALRRLRALFDDPLFVRTP 60 Query: 60 LGLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSK 117 G+ PT + + L + + N+ + + P F ++ L L Sbjct: 61 TGMVPTDAALRLHAPLTQAFGIINVAVQQIARFDPATAQRVFRVSMSDMSEFYFLPPLLS 120 Query: 118 QIYQRYPQATIKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLF 176 + + +++ N DS+ A+ GE+D+ L + LF Sbjct: 121 MLDRSARGIRLEIANVSVDSVSSAMRSGEIDLALGYVP----------GLDTGCVSKTLF 170 Query: 177 SDVPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLP 236 D +R HP Q + ++ + ++ L+EL R I + LP Sbjct: 171 VDEHVCVVRAGHPLRKQKPTKEDLANLRYVYASTNATGHRMVEQWLEELNLRRDIVLRLP 230 Query: 237 EFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHK 296 F + + D L + Q +N+ ++ LP + H Sbjct: 231 HFVVAPEIVQHTD-LAMIFPRSIAQRFNRNKAFRILPLPFALPPI-------EIQVHSHS 282 Query: 297 RNSHNPKIVWLRETIKNLYASMA 319 + S +P I WL + I +++ A Sbjct: 283 QFSADPGIAWLLDAIYDMFHQPA 305 >UniRef50_A8FAC2 Possible LysR family transcriptional regulator n=21 Tax=Bacillus RepID=A8FAC2_BACP2 Length = 329 Score = 233 bits (597), Expect = 5e-60, Method: Composition-based stats. Identities = 32/313 (10%), Positives = 90/313 (28%), Gaps = 28/313 (8%) Query: 7 TLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTP 66 +DL + ++ +E + ++AA+R+ + +S+ + KL LF + + + Sbjct: 32 KMDLRQIRYFIMVAEELNFSRAAERLKMAQPPLSQEIRKLEEQLGVTLFHRTRRQVELSD 91 Query: 67 LMVSMEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNALSKQIYQRYPQ 125 + + + + + M++ + K+ + +P Sbjct: 92 SGRVFLEEARRTLLQVDRTIKATQLADDGKIGHLTIGFVDSTDMVI--DIIKRFRESFPN 149 Query: 126 ATIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 + L L A+ + E+ IGF + + + E+ + + L Sbjct: 150 IHLVLCEMATEQQLKALHKKEIQIGFIRSNQNNKI----------LTSEICCEESLSLVL 199 Query: 185 RKDHPALH-QTWNLDTFLRYPHISICW--EQSDTWALDNVLQELGRERTIAMSLPEFEQS 241 ++HP + P I + + + E + + Sbjct: 200 PENHPLASFPKVPIHLLANEPFIMFPRHLGAAFYDLIISYFWENNISLNVVQEAVQMHTI 259 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 + + A + + + + + Q+ V + W + Sbjct: 260 VNLVAAGMGI----------SVVPSSVESVKRSGVVYRKIQETTPRVNLYVSWRHD-ETS 308 Query: 302 PKIVWLRETIKNL 314 ++ Sbjct: 309 TVAQHFLTVVREA 321 >UniRef50_A6F002 Transcriptional regulator, LysR family protein n=1 Tax=Marinobacter algicola DG893 RepID=A6F002_9ALTE Length = 299 Score = 233 bits (597), Expect = 5e-60, Method: Composition-based stats. Identities = 37/315 (11%), Positives = 100/315 (31%), Gaps = 24/315 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L+LL + ++RS ++AA+ I+++ AVS+++ +L L + T Sbjct: 1 MNLHLLRTFASVAEQRSFSRAAEAIHISQPAVSRAVRELEEQLGMALLERRGGQVRLTEA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + Q+ + + + + A + L + + +++P Sbjct: 61 GAELYQHARAIFALEQSAMADLRGRQGLERGSLTIGASRTIGTYFLPPVIAEFLRQFPAI 120 Query: 127 TIKLRNWDYDSLD-AITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 +++ + + + + + E+DI F ++ D + Sbjct: 121 DVRIISENTELIQRRLLAYELDIAFIEGSVE----------DSRVEEVFWHEDELVILAH 170 Query: 186 KDHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 DHP L ++ + +L++ G + + + + Sbjct: 171 SDHPLLNRKSLKASDLDAERWVLREQGSGTRSVTLALLKQAGVKVDRTIEVGGNGALVQS 230 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQ-LPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 A L LA + + ++ P + + P + + +P Sbjct: 231 VAA--GLGLAMVSSVAAREHLSVGKVNVLNFP--------DRFKRPLHRIRLRNKPESPA 280 Query: 304 IVWLRETIKNLYASM 318 L + ++ Sbjct: 281 AQALVAVADRVASTF 295 >UniRef50_O68014 HTH-type transcriptional regulator benM n=12 Tax=Acinetobacter RepID=BENM_ACIAD Length = 304 Score = 233 bits (597), Expect = 5e-60, Method: Composition-based stats. Identities = 45/294 (15%), Positives = 96/294 (32%), Gaps = 26/294 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L +++E+S TKAA ++ + +S+ + L L + TP Sbjct: 1 MELRHLRYFVAVVEEQSFTKAADKLCIAQPPLSRQIQNLEEELGIQLLERGSRPVKTTPE 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQAT 127 Q + + + ++ + L+ +L + Q +P Sbjct: 61 GHFFYQYAIKLLSNVDQMVSMTKRIASVEKTIRIGFVGSLLFGLLPRIIHLYRQAHPNLR 120 Query: 128 IKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRK 186 I+L +A+ G +D GF + + I +L ++ V + Sbjct: 121 IELYEMGTKAQTEALKEGRIDAGFGRLKISDPA----------IKRTLLRNERLMVAVHA 170 Query: 187 DHPALH---QTWNLDTFLRYPHISICWE--QSDTWALDNVLQELGRERTIAMSLPEFEQS 241 HP + +L+ + + + + + N+ + G E T + E + + Sbjct: 171 SHPLNQMKDKGVHLNDLIDEKILLYPSSPKPNFSTHVMNIFSDHGLEPTKINEVREVQLA 230 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWH 295 L + A + ++ P QL L V L P + Sbjct: 231 LGLVAAGEG--ISLVPAS-TQSIQLFNLSYVPL-------LDPDAITPIYIAVR 274 >UniRef50_Q1IX51 Transcriptional regulator, LysR family n=3 Tax=Deinococcus RepID=Q1IX51_DEIGD Length = 297 Score = 233 bits (596), Expect = 5e-60, Method: Composition-based stats. Identities = 39/314 (12%), Positives = 87/314 (27%), Gaps = 27/314 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L L +E +AA+R+ V A+S S+ L PL + + + TP Sbjct: 1 MELRHLRHFVALAEEEHFGRAAERVFVVQQALSNSIKNLEDEVGVPLVLRTTRRVQLTPA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKP-HHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 E + + ++++ + + S L L + + YP Sbjct: 61 GREFLAGARETLAQAAQMVERARRAARGEVGRLTVGFVSGLAFGGLPEIVRAFRDLYPNV 120 Query: 127 TIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 ++ LR + + G++D+G +D L+ L Sbjct: 121 SVDLRELTAQEQEAGLRGGQIDVGLMLLPVR----------DPGLDSHPLWRQPLVAALP 170 Query: 186 KDHPALH-QTWNLDTFLRYPHISICW--EQSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 H + + + + + G + E L Sbjct: 171 AGHALARKRRLRIGDLRDERFVFFPRHLRATYFDQVMRWCGAAGFTPNVVQEAIEIPTLL 230 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKR-NSHN 301 + A + + ++ + + LP + +W + Sbjct: 231 SLVAA--GIGVFLPIQFFERLS---------LPGVVYRPLDDAPVIEIVAVWRRDEAEGG 279 Query: 302 PKIVWLRETIKNLY 315 P + + Sbjct: 280 PIVRAFLRVAQAAL 293 >UniRef50_Q7NKC0 Nitrogen assimilation transcriptional activator n=1 Tax=Gloeobacter violaceus RepID=Q7NKC0_GLOVI Length = 326 Score = 233 bits (596), Expect = 6e-60, Method: Composition-based stats. Identities = 51/313 (16%), Positives = 89/313 (28%), Gaps = 23/313 (7%) Query: 6 TTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPT 65 + LD L L S AA++ V+ +SK + L PLF + S T Sbjct: 10 SGLDSRQLQYFLALNHCGSFRLAAEQCGVSQPGLSKQIMALEGELGGPLFDRTGRRASLT 69 Query: 66 PLMVSMEQNLAEWMQMSNLLLDKPHH-QTPRGLKFELAAESPLMMIMLNALSKQIYQRYP 124 PL + P + +A + +L AL Q++P Sbjct: 70 PLGECFLPYARRAYKELEQSRAAIGELLKPDRGEICIAGLHSVNAYLLPALLAVFRQKHP 129 Query: 125 QATIKLRN-WDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVW 183 ++L + + + VD H + L+ + V Sbjct: 130 GTQLRLTSLGSERIIKVLLDRLVDAAILMGPVHSP----------ELVSTPLYEEELVVL 179 Query: 184 LRKDHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 L HP + L P + + AL + +G +A+ L E Sbjct: 180 LPAHHPLARRPSVRLAEVAILPQVVFRDGYAMRTALVQHFRAIGATVDVAVELNTLEAFK 239 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 M Q + +A P + L ++ + L+ K N P Sbjct: 240 EMVRQE--VGVAILPLCAVQHLGT--------DLVIARLEEPSITRRVELVCRKDNYQVP 289 Query: 303 KIVWLRETIKNLY 315 + + Sbjct: 290 VVAAFTRLVAEHL 302 >UniRef50_Q1AUB8 Transcriptional regulator, LysR family n=2 Tax=Bacteria RepID=Q1AUB8_RUBXD Length = 320 Score = 233 bits (595), Expect = 7e-60, Method: Composition-based stats. Identities = 41/303 (13%), Positives = 88/303 (29%), Gaps = 21/303 (6%) Query: 11 NLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVS 70 L C + + ++++AA+ + +T ++ L L D LFV + G+ T Sbjct: 4 RQLECFLAVARTGNLSRAAEEMYLTQPTLTARLKALEEELGDQLFVRTSRGMRLTEAGRE 63 Query: 71 MEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNALSKQIYQRYPQATIK 129 + + K + A + L L ++ YP+ + Sbjct: 64 FLPYAERVVSSFEEGKRRLEELRGASGGKLVVGASPGVGTYALPGLLERFVGAYPKVNVS 123 Query: 130 LRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDH 188 +R D L+ + R EV +G + ++ L+ D + + +H Sbjct: 124 VRTGHSEDILEMVLREEVHLGLTRE-----------MRHPEVESVPLYEDELVLVVAPEH 172 Query: 189 PALHQ-TWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQ 247 + + L I + S + G + + E + M Sbjct: 173 RFTQRGSAGLAEIGEEQLILFDNDSSYYEQTQALFTSAGIRELRTLEVDNIEAAKRMVEH 232 Query: 248 PDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWL 307 L +A PR ++ ++ L + + + Sbjct: 233 --RLGIAFLPRSAIVRAVSAGNLVL-----IRVEDGPEMTRSIVALRRRDAPASGPVRAF 285 Query: 308 RET 310 E Sbjct: 286 LEL 288 >UniRef50_Q67KY5 LysR family transcriptional regulator n=1 Tax=Symbiobacterium thermophilum RepID=Q67KY5_SYMTH Length = 298 Score = 233 bits (595), Expect = 7e-60, Method: Composition-based stats. Identities = 64/308 (20%), Positives = 113/308 (36%), Gaps = 22/308 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 + L+ L +++ RS +KAA R ++ AVS+ + + F L SP G+ PT Sbjct: 1 MLLSYLRVYCDIIETRSFSKAAARNFISQPAVSQQVKAMEEHFQQRLIERSPQGIYPTEA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + E ++ L + + + +A + + L K+ Q YPQA Sbjct: 61 GRIFYEAAREIVERYQALEQQMANLSQSVSGTIRVATVYTVGLHDLPPYIKKFIQTYPQA 120 Query: 127 TIKLR-NWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 I L + +A+ + +VDIG R + L SD V + Sbjct: 121 RIHLEYSRTNKIYEAVRQNQVDIGIVAYPQEGRQ----------LGVIPLPSDELVVIVS 170 Query: 186 KDHPALH--QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 +HP + L R P I+ + A D VL + G + I E Sbjct: 171 PNHPLARAGKPVALQQLHRLPFIAFDPDIPTRKATDRVLNDHGVDVEIIHEFDNVETIKR 230 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 L ++ PR C + LVALP+ ++E P +++ + + + Sbjct: 231 SVEAE--LGVSIIPRRCAQWEVRSG-SLVALPIA-----DMRIERPVGVIYKRGKNFSNT 282 Query: 304 IVWLRETI 311 + + Sbjct: 283 LQKFIAIL 290 >UniRef50_C6D9U9 Transcriptional regulator, LysR family n=1 Tax=Pectobacterium carotovorum subsp. carotovorum PC1 RepID=C6D9U9_PECCP Length = 294 Score = 233 bits (595), Expect = 8e-60, Method: Composition-based stats. Identities = 43/315 (13%), Positives = 103/315 (32%), Gaps = 29/315 (9%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++ + + +E T+AA R+N+ +S+ + L A LF + + T Sbjct: 1 MEFRHIRYFIAVAEELHFTRAAVRLNIGQPPLSQQIQSLEAELGVLLFERTRRSVRLTEA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQ-TPRGLKFELAAESP---LMMIMLNALSKQIYQRY 123 E ++ S + + + +++ S + + + +Y Sbjct: 61 GQHFLIRAREILESSEGVASELQRISRGEAGELKISFTSTGLLVEELRTP--LRTFRAKY 118 Query: 124 PQATIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCV 182 P+ + L+ + A+ GE+DIG P + + +D C+ Sbjct: 119 PEVRLTLKEMFTHLQFAALLAGELDIGCVRF--------NGPRAPDGLTLRWIRNDRLCL 170 Query: 183 WLRKDHPALHQT-WNLDTFLRYPHISIC--WEQSDTWALDNVLQELGRERTIAMSLPEFE 239 L DHP +T + P I S + + ++ G + E Sbjct: 171 VLPDDHPLAGRTDVGIVEVRDEPFIGYPAKAGASVSDYVTMCCEQAGFIPNVTQEAREAM 230 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 + + A + +A P+ + F ++ L+ + Sbjct: 231 TQIGLVAA--GMGVAILPQPMDQLQPKG--------VCFIPLSDAGAQLRMALVTRES-D 279 Query: 300 HNPKIVWLRETIKNL 314 ++P++ + ++ + Sbjct: 280 NSPRVRNFVDLVRQM 294 >UniRef50_Q46YJ7 Transcriptional regulator, LysR family n=5 Tax=cellular organisms RepID=Q46YJ7_RALEJ Length = 394 Score = 233 bits (595), Expect = 8e-60, Method: Composition-based stats. Identities = 73/318 (22%), Positives = 127/318 (39%), Gaps = 23/318 (7%) Query: 6 TTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPT 65 LD LL L L+ E+SVT+ A R+ + A+S +L +LR D + V G+ PT Sbjct: 84 DHLDTYLLRVLHTLLTEQSVTRTAVRLGQSQPAISNTLKRLREITGDAILVRGKSGMVPT 143 Query: 66 PLMVSMEQNLAEWMQMSNLLLDKPHHQTPR--GLKFELAAESPLMMIMLNALSKQIYQRY 123 + + + + + + P P F L A L L + +++ + Sbjct: 144 ERGRELLELAEQSLAAMDRIARPPQQFDPATTTRTFHLGAPDYLDAFFLPNIVERVRRLA 203 Query: 124 PQATIKLRNWD--YDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPC 181 P A + + D L+ + +G++DI S P + LF D Sbjct: 204 PGAKLFVHPMTSSSDFLEDLEQGQLDIVIG----------NWLSPPEHLHISPLFDDEVV 253 Query: 182 VWLRKDHPALHQTWNLDTFLRYPHISICW-EQSDTWALDNVLQELGRERTIAMSLPEFEQ 240 L HP + L +L PH++ +D L E G +R I ++LP F Sbjct: 254 CMLGAQHPLARKGLTLKHYLEMPHLAPAPYASMQRSMIDQALAEQGYKRNIQVTLPYFGL 313 Query: 241 SLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 ++ + D + T ++ +Y Q + +V P+ F + F LWH+R Sbjct: 314 VPYVLMKTDMV-FTTGRQFAAHYAQYLPIRMVPSPVTFP-------RMRFYQLWHERCHA 365 Query: 301 NPKIVWLRETIKNLYASM 318 P ++W+R I + + Sbjct: 366 APDVMWMRRMIAEVATDL 383 >UniRef50_C0ZFW3 Transcriptional regulator n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZFW3_BREBN Length = 292 Score = 233 bits (595), Expect = 9e-60, Method: Composition-based stats. Identities = 46/313 (14%), Positives = 106/313 (33%), Gaps = 27/313 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 + LN + +++ S+TKA + + +T SA+S ++A L F L G+S T Sbjct: 1 MSLNKFEVVITVIESGSLTKAGEILGLTQSAISHAIASLEREFGFSLLTRGRSGISLTSN 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + E ++ + + + + + L + K+ +YP Sbjct: 61 GERLLPYMRETLRCHERMKQEVFAINGLEVGTVRIGTFTSVSTQWLPGILKRFQDQYPAI 120 Query: 127 TIKLRNWDYDSLD-AITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 IKL YD ++ I GE+D GF + +++ L D + + Sbjct: 121 EIKLMEGYYDGIESWIQTGEIDFGFVSLPTTE-----------DLEWIPLKKDQMYLLVT 169 Query: 186 KDHPALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 ++HP + ++ I + + +L + E I + + + M Sbjct: 170 EEHPLYKEERVHVSRLAEETFIMPKTGCDND--IQRLLAQYQIEPRIKYEVGDDHAIIAM 227 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 + L ++ P + + ++ L + + + +P Sbjct: 228 VQ--NGLGISILPEMIL-FRLPANIRMIPL--------EGEHYRSLGVAATSFAKQSPAA 276 Query: 305 VWLRETIKNLYAS 317 + + + Sbjct: 277 KRFLQCVTDWVNE 289 >UniRef50_C0CUF5 Putative uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0CUF5_9CLOT Length = 302 Score = 233 bits (595), Expect = 9e-60, Method: Composition-based stats. Identities = 42/309 (13%), Positives = 93/309 (30%), Gaps = 21/309 (6%) Query: 7 TLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTP 66 + L L + + S+T AA R+ +VS ++ ++ ++ LF L T Sbjct: 2 DVTLRHLRIFLTVCEAGSMTGAANRLFTAQPSVSLAIREMEEYYGVKLFDRISKKLFLTE 61 Query: 67 LMVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + + + + + + + + A + +L K++ + YP+ Sbjct: 62 AGHQVLEYARHIIALFDEMEQEVRNPD-MSGTLRVGASITVGTFLLPGYVKELTRLYPEL 120 Query: 127 TIKLRNWDYDSLDA-ITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 ++ R + ++++ + E+D+G +H R I E D Sbjct: 121 RVEARIENSNNIEKCVLSNEIDLGVIEGIAHSRY----------ISSESFHGDRLAFVCP 170 Query: 186 KDHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 H + L I + D + + IA + + Sbjct: 171 PGHRFAGKQDVKLGDLQSESFILREKGSAGREIFDGLAAAHELDIRIAWQSTSNQAIIHG 230 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 A L + P + + +E F +++HK Sbjct: 231 VAAGFGL--SVLPASLAAEGVERG------SIAEFSVEGLSMERKFCVIYHKNKFLARGA 282 Query: 305 VWLRETIKN 313 L K Sbjct: 283 RELIRLFKE 291 >UniRef50_A0KPM6 Transcriptional regulator, LysR family n=2 Tax=Gammaproteobacteria RepID=A0KPM6_AERHH Length = 297 Score = 232 bits (594), Expect = 9e-60, Method: Composition-based stats. Identities = 43/310 (13%), Positives = 91/310 (29%), Gaps = 25/310 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +D+ L L++E+S T+A++++ VT +SK + + PL + + T Sbjct: 1 MDIRALRYFVELVREQSFTRASEKLFVTQPTISKMIRNMEEELGQPLLSRAGRRFTLTDS 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + L + + L + + L + RYP+ Sbjct: 61 GRVLFNRAQTILAEMQQLEAELADLQSLQFGRLALGIPPMVGHVY-ADLIRAYRSRYPKV 119 Query: 127 TIKLRN-WDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + + A+ GE+D+ + + + L V L Sbjct: 120 ELSIVEYGGRRIEQAVLEGELDLAITMLPTKEGGA---------LSALELDQYPIQVVLP 170 Query: 186 KDHPALHQ--TWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 D P L+ P + + + L+ + G E +A +++ Sbjct: 171 -DLPRWRDCPEIRLEALCDEPFLLYTQAFTLSERLEQACRVAGFEPQVAARSSQWDFLTA 229 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 M + +A P L L L +L ++W + Sbjct: 230 MVRS--GMGVAFLPEPICRRLAPDGLVLRPL--------VPELSWRLGVIWPSERYLSRT 279 Query: 304 IVWLRETIKN 313 + Sbjct: 280 AEAWLALCRE 289 >UniRef50_B5YJV7 Transcriptional regulator n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YJV7_THEYD Length = 302 Score = 232 bits (594), Expect = 1e-59, Method: Composition-based stats. Identities = 46/311 (14%), Positives = 109/311 (35%), Gaps = 24/311 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++ + L + + +S +K ++ I++T AVS + L ++ LF S ++ TP Sbjct: 1 MEDHKLKVFCTVAETKSFSKTSEIIHLTQPAVSLQIQALEELYETKLFDRSSGSITLTPA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + + + M + T ++ A + + +L A++ +R+P+ Sbjct: 61 GEILYKYAKQILTMYAEAAKEISKITGLIKGCVKIGAGTTVGNYILPAVAVDFKKRHPKI 120 Query: 127 TIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + + + L+ + +D G + + SD CV Sbjct: 121 RVSVSIGNAKKILEMLNSSMIDFGIISEMPGKSK----------FIVDSIISDELCVICS 170 Query: 186 KDHPA-LHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRE---RTIAMSLPEFEQS 241 DHP ++ +L ++ P + S ++ L E G I++ L Sbjct: 171 ADHPLNNQKSVSLYDVVKEPFVIREEGSSTRVIIEKFLAEHGLSVSDLHISLILGSTGSI 230 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 + + L+ ++ L + ++ K+ F ++ K + Sbjct: 231 KEAVER--GIGLSIVSKWAIRKEVSCG------NLRILKLKEGKITRDFYIILPKNTILS 282 Query: 302 PKIVWLRETIK 312 P + +K Sbjct: 283 PAVEEFITYLK 293 >UniRef50_C3NNS3 LysR family regulatory protein CidR n=22 Tax=Vibrio RepID=C3NNS3_VIBCJ Length = 302 Score = 232 bits (594), Expect = 1e-59, Method: Composition-based stats. Identities = 42/320 (13%), Positives = 92/320 (28%), Gaps = 30/320 (9%) Query: 3 KSITT-----LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVN 57 +D+ L L+ ++S TKA++R+ VT +SK + L + PL Sbjct: 1 MPFRHTKRLLMDIRALRYFVELVNQQSFTKASERLFVTQPTISKMIRNLEQELEQPLLHR 60 Query: 58 SPLGLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALS 116 T + Q + + L + L + + L Sbjct: 61 EGRRFWLTEAGEIVYQRAQQILTQMQQLDAELTDLNQLHRGHLRLGIPPMVGHVY-ARLF 119 Query: 117 KQIYQRYPQATIKLRN-WDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVL 175 +Q Q YP + + AI G++D+ + L + ++ L Sbjct: 120 RQYRQTYPNVELTVVEYGGRKIEQAILDGDIDVAVT---------MLSPNQHPDLNTVAL 170 Query: 176 FSDVPCVWLRKDHPALHQ--TWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAM 233 + D P T + P E + + + Q G +A Sbjct: 171 DHYPIFAVVP-DIPLWRSLTTLTWAQISQEPFYLFTHEFTLSDHIHTCCQAAGYTPQVAA 229 Query: 234 SLPEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLL 293 +++ + + + + P Q + + + ++ ++ Sbjct: 230 RSSQWDFLVALVKS--GVGVCFLPAPLCQRIQGDGVLIYPI--------TPAIDWRLGVV 279 Query: 294 WHKRNSHNPKIVWLRETIKN 313 WH+ + + Sbjct: 280 WHRERYVSKTAEAWIALCRR 299 >UniRef50_C6MCJ5 Transcriptional regulator, LysR family n=1 Tax=Nitrosomonas sp. AL212 RepID=C6MCJ5_9PROT Length = 298 Score = 232 bits (594), Expect = 1e-59, Method: Composition-based stats. Identities = 47/314 (14%), Positives = 108/314 (34%), Gaps = 19/314 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 + L+ L + + S+TKAA+ ++ ++S+ L KL LF L T Sbjct: 1 MQLHQLKYFVSVAKTGSITKAAEACFISQPSLSQQLKKLEGIVGKRLFSRIKGKLVLTKP 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTP-RGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + ++ + ++ + + G + L +L + + + Q+YPQA Sbjct: 61 GQILYEHACKILRSVDDAKVEMKEVDQNSGGLIRVGILPTLAPFILPKILESLSQKYPQA 120 Query: 127 TIKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + +R + ++A + GE+DI E+L + E LF D + + Sbjct: 121 NVIIREEVSEVLINAASCGELDILI----------EVLPFDQSNLTIESLFFDTFYLAVH 170 Query: 186 KDHPALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 ++ P + +++ P I + T +++ + + Sbjct: 171 QNSPLAKLKEVHVNQLEGMPFILLEDIHCLTKQIEHFCFNENFIPKAVFQASQIGTIKLL 230 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 ++ P + + + + ++ L +P Sbjct: 231 IESQ--YGISILPSISMKHKDEQNICY----IKLIGNDKQIPGREVVLAISNDRYLSPAA 284 Query: 305 VWLRETIKNLYASM 318 +L +TIK + +M Sbjct: 285 SFLIKTIKEHFRNM 298 >UniRef50_Q2RZH0 Transcriptional regulator, LysR family n=1 Tax=Salinibacter ruber DSM 13855 RepID=Q2RZH0_SALRD Length = 300 Score = 232 bits (594), Expect = 1e-59, Method: Composition-based stats. Identities = 47/311 (15%), Positives = 94/311 (30%), Gaps = 26/311 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L L E +AA + V S +S+ + LF + G+ T Sbjct: 1 MELRHLRYFTALADELHFGRAADAVFVAQSTLSQQIKAFEEEIGVALFDRASGGVELTEA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQ-TPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + ++ + + + M L A+ K + P Sbjct: 61 GHTFLPYAKRVLREARRAESVARAARDGLAGLLTITYAASAMRSGLPAIIKTFRSKRPHG 120 Query: 127 TIKLRN-WDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + L + +DA+ E D+GF + R + + LF+ V L Sbjct: 121 ELDLVEQTTREQVDALRGKETDVGFLFLPINER----------GLRVQPLFTAPMVVVLP 170 Query: 186 KDHPALHQT-WNLDTFLRYPHISICWEQS--DTWALDNVLQELGRERTIAMSLPEFEQSL 242 H +T L PH+ + A E G I + E L Sbjct: 171 TGHRLADRTSVPLRELEGEPHVIWARSGAPRIHDAYVRACHEAGFTPQIPQEIERGESFL 230 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 + + +A + + + + + + + + L + + N +P Sbjct: 231 GLVEAGLGVSIA----------HASNVQIQRPGVGYAKIVEPTVPLTLGLAYRRDND-SP 279 Query: 303 KIVWLRETIKN 313 + ET+ + Sbjct: 280 LLDRFLETVAD 290 >UniRef50_A7GMD6 Transcriptional regulator, LysR family n=3 Tax=Bacillaceae RepID=A7GMD6_BACCN Length = 294 Score = 232 bits (593), Expect = 1e-59, Method: Composition-based stats. Identities = 39/309 (12%), Positives = 93/309 (30%), Gaps = 24/309 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +D+ L + QE +T+AAKR+++ +S+ L L L + L T Sbjct: 1 MDIRQLRYFYTIAQEGQITRAAKRLHMAQPPLSQQLKLLEQELGVQLLERNGRKLELTEA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQ-TPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + E + + + + + + + + + ++ YP Sbjct: 61 GHVLFKKTKEILTHFHETITEVKEVGSGLKGTLSIGSVKSAFSYI-PDRLRSFHETYPLV 119 Query: 127 TIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 T +L+ D I E+++ L +D + Sbjct: 120 TFRLQEGDSFRLAQLIKNREIELAIVRLPLEM----------EDFASLSLPADQFVAVMP 169 Query: 186 KDHPALHQTWNLDTFLRYPHISICW--EQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 D ++ + P + + + Q+ G + I P+ L Sbjct: 170 NDKADNRSMISMKELAKLPLMLLQRIKGFGLYEKVLENFQKHGLKPNIICDCPDAAMLLS 229 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 + + P+ L+ + ++ + + ++W K S + Sbjct: 230 LVRS--GIGCTLLPKSTLIALPLNGIKMMD-------IEDSTITSDSAVIWLKNRSLSKV 280 Query: 304 IVWLRETIK 312 + ET + Sbjct: 281 ALHFLETFR 289 >UniRef50_A5W6Q9 Transcriptional regulator, LysR family n=12 Tax=Pseudomonas RepID=A5W6Q9_PSEP1 Length = 326 Score = 232 bits (593), Expect = 1e-59, Method: Composition-based stats. Identities = 75/317 (23%), Positives = 132/317 (41%), Gaps = 24/317 (7%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 +I+ DLNLL +L++E++V++AA+R+ +T VS +LA+LR DPL V + Sbjct: 26 MNISNFDLNLLRVFDMLLREQNVSRAAERLALTQPTVSNALARLRDQLGDPLLVRVGRRM 85 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQIY 120 PTP +++E + +Q L P+ + +A + + + L ++ Sbjct: 86 RPTPRALALEGPIRAALQQIEQTLGTGDGFEPQRSHRQLRIALTDFVEQLCMPPLLARLE 145 Query: 121 QRYPQATIKLRNWDYDS-LDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 P I + + + +A+ RG++D+ +P + Sbjct: 146 LLAPNVRIDVVHLAPNLPAEALDRGDLDLVLGR----------FDEVPARFTRHPWRRET 195 Query: 180 PCVWLRKDHPAL--HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPE 237 + LR+ HP L Q +LD FL HI + +D L E G R IA + P Sbjct: 196 LQIALRQQHPHLVPGQALDLDAFLGLRHIWV-HGGQTRGMVDQWLAEQGLTRQIAYTTPN 254 Query: 238 FEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKR 297 + Q+ +AA D + + + Q + L L + LP + ++ Sbjct: 255 YLQAAHLAAATD-MCVVLPRQLAQQFAHLLPLAVYELPFALE-------PFELEVVHLSH 306 Query: 298 NSHNPKIVWLRETIKNL 314 H+P + WL E I L Sbjct: 307 RQHDPALAWLVEQILTL 323 >UniRef50_A1W235 Transcriptional regulator, LysR family n=6 Tax=Burkholderiales RepID=A1W235_ACISJ Length = 309 Score = 232 bits (593), Expect = 1e-59, Method: Composition-based stats. Identities = 44/315 (13%), Positives = 89/315 (28%), Gaps = 25/315 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L L + + +AA+R+++ +S S+ KL PLF + G+ TP Sbjct: 1 MNLRQLSQFVALAETGNFHRAAERLHMAQPPLSVSIRKLEEELGSPLFERTTTGVVLTPA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQT-PRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 +M + + + G L +L L + QRYPQ Sbjct: 61 GEAMLGDARRALFHAQQCRQAVQDAREGEGGLLRLGIIGSATYALLPQLIPSLRQRYPQI 120 Query: 127 TIKLRNWD-YDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 ++L + L+ + D G P + L D + + Sbjct: 121 ELELSEATSSEILEGLVSRRFDAGLLRYPVLD---------PSGFELLPLDRDDFVLAVA 171 Query: 186 KDHPALHQ-TWNLDTFLRYPHISICWE--QSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 + P + L P I S + Q G +A + + + Sbjct: 172 ESSPLAQRDAIALAEAAHEPFIMYPQHKVPSLSALAMMRCQFSGFSPRVAQEAMQVQTIM 231 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHK-RNSHN 301 + A + + +V + + + + + Sbjct: 232 SLVASGLGVG--LVASVARQ--------VVPRGVKCLALTDNPPGFHVGIALARLASGTS 281 Query: 302 PKIVWLRETIKNLYA 316 + E + Sbjct: 282 RVVERFTEHALRFAS 296 >UniRef50_B8DKN9 Transcriptional regulator, LysR family n=4 Tax=Proteobacteria RepID=B8DKN9_DESVM Length = 699 Score = 232 bits (593), Expect = 1e-59, Method: Composition-based stats. Identities = 39/307 (12%), Positives = 87/307 (28%), Gaps = 19/307 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L + + S +AA +N S VS +A L LF ++ T Sbjct: 1 MELRDLRTFAAVARLLSFHRAAAELNAAQSTVSARIAALETELGVRLFERLGRRVALTEA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQAT 127 + Q A+ + + + ++ + L L + +R+P+ Sbjct: 61 GERLVQYAAKLIDVEDEARAWVTGESRLRGLLTVRVPESLCAYRLPPVIAAFRRRHPEVA 120 Query: 128 IKLRNWDYDSLD-AITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRK 186 + L + L+ + +G D+ F +S ++ E L + + Sbjct: 121 LHLTACTLNGLEKDLRQGITDLAFVMADSVRGG---------DLNVEALGVEPLVLVAAP 171 Query: 187 DHPA-LHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMA 245 HP + + + ++ L G + + Sbjct: 172 HHPLAARDRVVARDLHGITLVLSTTDCAYRTVIEEALAAEGIQPAAGLEFSSASALRGCV 231 Query: 246 AQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIV 305 A + + P L + E ++ H+ +P + Sbjct: 232 AS--GVGITLLPEAAVRDELRAGT------LRALAWADQPFETAVLMVRHRGKWVSPYMD 283 Query: 306 WLRETIK 312 E + Sbjct: 284 TFMELCR 290 >UniRef50_C6C1H7 Transcriptional regulator, LysR family n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6C1H7_DESAD Length = 304 Score = 232 bits (593), Expect = 1e-59, Method: Composition-based stats. Identities = 34/314 (10%), Positives = 91/314 (28%), Gaps = 26/314 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L + +E +AA+R+++ S+ + L L + + T Sbjct: 1 MELRQLRYFIAVAEELHFGRAARRVHIAQPPFSQQIKGLEEEVGARLLERNSRKVRLTNE 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQT-PRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + + + ++ M +L + RYP Sbjct: 61 GRYFYKQALDIVAQAEEAAATVGRMAKGEYGNIKVGFMEIAMDSLLPEAVRSFSHRYPGV 120 Query: 127 TIKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 +++L + L+ I GE+D+GF + + LFS + + Sbjct: 121 SVRLSQFGASIQLERIHSGELDVGF---------STVYLRAMEGLSSVKLFSRKHVLAVP 171 Query: 186 KDHPA-LHQTWNLDTFLRYPHISICWEQ--SDTWALDNVLQELGRERTIAMSLPEFEQSL 242 +DH ++ +L R + ++ G + + + Sbjct: 172 EDHIFTAEKSVSLKEIARENLLMFPRSGQPDLYDSIMQAFTSRGLVPKVRQEISGLSGAS 231 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 + + + P + + + ++W+ + + Sbjct: 232 ALI--SSGMGVTFLPE---------NSRVARKGIAMVPISDDFPRMDIFMVWNSEDY-SN 279 Query: 303 KIVWLRETIKNLYA 316 E + + ++ Sbjct: 280 TAGVFMEWVADYFS 293 >UniRef50_Q473Q1 Transcriptional regulator, LysR family n=9 Tax=Burkholderiaceae RepID=Q473Q1_RALEJ Length = 315 Score = 232 bits (593), Expect = 1e-59, Method: Composition-based stats. Identities = 72/321 (22%), Positives = 128/321 (39%), Gaps = 21/321 (6%) Query: 2 KKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLG 61 ++ +DLNL + + E S+T AA+++N+T AVS +L +LR FDDPLF G Sbjct: 3 AMQLSRIDLNLFVVFDAIYSEGSITAAARQLNLTQPAVSHALGRLRGLFDDPLFERRGQG 62 Query: 62 LSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTP--RGLKFELAAESPLMMIMLNALSKQI 119 ++PTPL S+ + +Q L H P +F + L +L L ++ Sbjct: 63 MAPTPLARSLASEVRSALQSFARTLQDTPHFDPTNTVRRFTIGMRDALESTLLPPLMARV 122 Query: 120 YQRYPQATI-KLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSD 178 PQ I +R + + G +D + I + +D Sbjct: 123 TSVAPQVEIAAIRFDRREMESELLAGTIDAAIDILLPVSPA----------IHHAQFMAD 172 Query: 179 VPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEF 238 V R+DHP + + L+ +L H+ + + D L +G R + + + Sbjct: 173 PMIVLARRDHPLVKKELTLERYLAAEHVHVSSRRRGAGLEDQALHRMGLTRRVRLRCQHY 232 Query: 239 EQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRN 298 + + + D L RY + N+ + +++LP L WH Sbjct: 233 AAACRVVSCTDLLA-TLPLRYARIANEPYANRILSLPFKVPSL-------ELHLYWHAGG 284 Query: 299 SHNPKIVWLRETIKNLYASMA 319 ++ WLRE + + +S+ Sbjct: 285 ENDGANRWLREQLMAVMSSLG 305 >UniRef50_A3TPW4 Putative transcriptional regulator n=1 Tax=Janibacter sp. HTCC2649 RepID=A3TPW4_9MICO Length = 292 Score = 232 bits (593), Expect = 1e-59, Method: Composition-based stats. Identities = 40/307 (13%), Positives = 89/307 (28%), Gaps = 26/307 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 + L L L L + R VT A + V+ +S++LA++ A LF P G+ TP Sbjct: 1 MQLRDLEWLVALAEHRHVTDTAAVLGVSQPTLSRALARIEADLGARLFERVPTGVVLTPH 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPH-HQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + + L P LA + ++ + ++ + P Sbjct: 61 GELVVTAARDLTARHDQLRADLAGRLDPDSGTVRLAFLDSMSTSLVPRVLREFHAHAPAV 120 Query: 127 TIKL-RNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + L + +D + G V++ + + L + + + Sbjct: 121 RVLLTQEPHHDITRDLDSGAVELAITSWLPPGP-----------FGWVPLQEERLVLVVP 169 Query: 186 KDHPA-LHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 +H + +L+ ++ +D++L G ++ + + Sbjct: 170 PNHRWKARRRISLEALADEDLVTTPHGFGYRTLIDDLLASAGVRPNVSFESADLATIEGL 229 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 + L +A P + + L W P Sbjct: 230 VSA--GLGVAVLPAQFAGHTGTIGI----------PLASSAARRTIGLTWRSDRDLAPPA 277 Query: 305 VWLRETI 311 + Sbjct: 278 ARFVAFV 284 >UniRef50_Q1GX89 Transcriptional regulator, LysR family n=13 Tax=Proteobacteria RepID=Q1GX89_METFK Length = 330 Score = 232 bits (592), Expect = 2e-59, Method: Composition-based stats. Identities = 41/315 (13%), Positives = 94/315 (29%), Gaps = 28/315 (8%) Query: 6 TTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPT 65 + L+ L + + +ER+ +AA++ V+ A+S ++ KL +F S ++ T Sbjct: 27 DNMTLSELKFIVAVAKERNFRRAAEKCFVSQPALSLAVKKLEEELGVTIFERSHRDVATT 86 Query: 66 PLMVSMEQNLAEWMQMSNLLLDKPH-HQTPRGLKFELAAESPLMMIMLNALSKQIYQRYP 124 P+ + ++ S+ + + F+L +L + + + P Sbjct: 87 PIGEQIIAQAIRTLEESDRIKEIARMGNNQLAGPFKLGVIYSTGPYLLPEIIPALRRLAP 146 Query: 125 QATIKLRN-WDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVW 183 + +++ + + +D + E L+ + V Sbjct: 147 EMPLEVEENLTANLETQLRNRVIDAAIIALPFDVP----------GVRCEPLYDESFVVA 196 Query: 184 LRKDHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVL---QELGRERTIAMSLPEFE 239 + HP + + + + + + G + E Sbjct: 197 VPDIHPWAERKEIRAEELADEKVLLLNSGHCFSNQVVLACPELSRHG----EVLQGNSLE 252 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 M A L + P + L + +P L W K + Sbjct: 253 TIRNMVASN--LGITVLPCSAAAGRYQNPL-IRTIPFA-----DPVPTRRIALAWRKGYT 304 Query: 300 HNPKIVWLRETIKNL 314 I L + I+ L Sbjct: 305 REKAIDCLLQAIRAL 319 >UniRef50_C9RY94 Transcriptional regulator, LysR family n=8 Tax=Bacillales RepID=C9RY94_GEOSY Length = 304 Score = 232 bits (592), Expect = 2e-59, Method: Composition-based stats. Identities = 40/310 (12%), Positives = 90/310 (29%), Gaps = 22/310 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +D LL ++++ + TKAA+ +++T AVS+ + L FD L + + Sbjct: 1 MD-QLLYVFVKVVEKGNFTKAAEELHMTQPAVSQHIQTLERLFDTKLLYRTNKYVKLNKA 59 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQ-TPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + E + + + + + A +L + +++Q YP Sbjct: 60 GEIVYHYAKEILGLYTRMNQLLDDLMNRASGELSIGASYTYGEYVLPQMIAKLHQHYPLI 119 Query: 127 TIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + + + ++ + ++D+G + P + E D V Sbjct: 120 KPTITIGNSNEIVEMVRGHQLDVGIIEMDIE----------PKNVYIEPFAQDQMVVVAS 169 Query: 186 KDHPALHQ-TWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 HP + T ++ I A D + + M + Sbjct: 170 AHHPYAQKETVQMEDLRNATWIVRETGSGTRKATDEFFLKHNFFPSSIMEFGSTQLIKEA 229 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 L L + L + F+L+ K + + Sbjct: 230 VEA--GLGLTFLSLWTIKKELSFGT------LKIIPINDEPFFRHFSLVTPKTPFYTKAM 281 Query: 305 VWLRETIKNL 314 ++ Sbjct: 282 ELFLTIVRTH 291 >UniRef50_Q1YDL8 Transcriptional regulator, LysR family n=1 Tax=Aurantimonas manganoxydans SI85-9A1 RepID=Q1YDL8_MOBAS Length = 302 Score = 232 bits (592), Expect = 2e-59, Method: Composition-based stats. Identities = 38/317 (11%), Positives = 96/317 (30%), Gaps = 27/317 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++ LL + +E +AA+R+++ A+++ + +L L + ++ TP Sbjct: 2 VETRLLRSFVCVAEELHFGRAARRLHIAQPALTRQIQQLEERLQATLLNRNQRIVTLTPA 61 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQ-TPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + + + + + + + ++ +P+ Sbjct: 62 GRMFLERSYRILADLEQAAKEVRRVEAGQEGRLSVGFIHSSTYGVTPLVLRRFRLAFPRV 121 Query: 127 TIKLRNWD-YDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 ++L + L A+ G++D+G S + L + V L Sbjct: 122 DLELFEMTIQEQLAALRDGQIDVGILRPPISDPS----------LRARPLREERFVVALP 171 Query: 186 KDHPALH-QTWNLDTFLRYPHISICWEQS--DTWALDNVLQELGRERTIAMSLPEFEQSL 242 DH +L I +S + + ++ G + + + Sbjct: 172 HDHRLAATDRLHLRDLSEDGFILFTQRKSPLFYARIIGMCEKAGFVPRVEQYATQIHTMI 231 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 + + + +A P + N + + E V L W +P Sbjct: 232 GLVSA--GMGVAIVPEVARSLNIPG--------VAYVEIADTPPTVQVCLGWRAS-DTSP 280 Query: 303 KIVWLRETIKNLYASMA 319 + + A +A Sbjct: 281 ILAAFCDH-AETSARLA 296 >UniRef50_C6D4H5 Transcriptional regulator, LysR family n=4 Tax=Bacillales RepID=C6D4H5_PAESJ Length = 303 Score = 232 bits (592), Expect = 2e-59, Method: Composition-based stats. Identities = 43/312 (13%), Positives = 95/312 (30%), Gaps = 24/312 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 L+ + L + + S + AA+ +++T AV+ + L +F L S + T Sbjct: 3 LNFHQLHIFYTVAERGSFSAAAQSLHMTQPAVTMQVQSLEDYFGTKLLQRSTKRIDLTEA 62 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQ-TPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 ++ +++ + +L A + +L L Q +P+ Sbjct: 63 GKALMPYARRSIELIRDTDQAMSAFTKQLKGRLQLGASLTIGEYILPRLLGPFGQTFPEI 122 Query: 127 TIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 +I ++ ++ I ++ G + + E + SD + + Sbjct: 123 SISMKVMNTAQIIEEIINHQLTFGLIEAPVN----------HPDMQMEAVMSDELKLIVP 172 Query: 186 KDHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRER---TIAMSLPEFEQS 241 KDHP + LD YP + ++ L+ + I M L Sbjct: 173 KDHPLSKRQKVLLDEVADYPFVVREQGSGTRLVMEEQLKRKKIDPADLKIVMELGSTGAV 232 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 L ++ + L L + + + F ++ K Sbjct: 233 KSAVEA--GLGVSFVSESSVKHEVALGL------LHVIPIEDTRFKRQFYSIYLKSTLLP 284 Query: 302 PKIVWLRETIKN 313 V ++ Sbjct: 285 ISAVTFLTFLRE 296 >UniRef50_B9XJ57 Transcriptional regulator, LysR family n=2 Tax=bacterium Ellin514 RepID=B9XJ57_9BACT Length = 301 Score = 232 bits (592), Expect = 2e-59, Method: Composition-based stats. Identities = 44/310 (14%), Positives = 98/310 (31%), Gaps = 23/310 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L + + TKAA+++ + A+S+ + L L SP G++ T Sbjct: 1 MELRHLRYFLAVADALNFTKAARQLRIAQPALSRRVQDLEDEIGVDLLKRSPRGVTLTAE 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + ++M++ +++ + + +L + +P Sbjct: 61 GKLFLEKTRQLLKMADESVEQVRALARGQFGSLHIGYAPSPTVEILPPALAAYQRAFPHV 120 Query: 127 TIKLRNWD-YDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + L + + +D + G + + + + I++E L S V L Sbjct: 121 NVLLHDASRREIVDGLQDGTLQLAVLPEVVNMEA--------EGIEFEPLRSYPYYVALS 172 Query: 186 KDHPALH-QTWNLDTFLRYPHISICWE--QSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 HP + L+ P + ++ + + LG IA+ + Sbjct: 173 PSHPLTRLKAIPLEKIANEPLVGFARHDYPDYYPFVERIFRPLGVTPKIAVECDSGSSLI 232 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 + LA +L L + K E+P + K P Sbjct: 233 TAVETGRGVSLAM---SVFKVVTGKRLVLRPV-------AGSKDEIPVGIARAKNGDLTP 282 Query: 303 KIVWLRETIK 312 E ++ Sbjct: 283 AGEKFCEFLR 292 >UniRef50_B1J8H5 Transcriptional regulator, LysR family n=5 Tax=Pseudomonas RepID=B1J8H5_PSEPW Length = 323 Score = 231 bits (591), Expect = 2e-59, Method: Composition-based stats. Identities = 48/309 (15%), Positives = 103/309 (33%), Gaps = 20/309 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++ LL + +E KAA R+++ +S+++ +L LF+ + G+ T Sbjct: 2 IETRLLRQFIAVAEELHFHKAAIRLHMAQPPLSQAINRLEEKLGFSLFLRNKRGVKLTAA 61 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQT-PRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 ++ + ++ ++ + + K + A S L K+ + YP Sbjct: 62 GMAFLETAYRTLKELEQGIEYARNVSEGICGKLTITAISIAYYESLLNTLKKFREIYPNV 121 Query: 127 TIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + +R A+ GE DIGF L P I+ +L ++ + L Sbjct: 122 RLTIREMPSASQAKALMAGEADIGFMR---------KLPMPPDTIESRLLLNEQIVMALP 172 Query: 186 KDHPALHQT-WNLDTFLRYPHISICW--EQSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 +H HQ +L F + L + + G + + + Sbjct: 173 ANHAKAHQPMVDLRDFAEEDFVFTPQALGSGYHSQLIALCESAGFYPKVVQEAAQIHTLI 232 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 + A +A P Y ++ + Q + + W+ +N +P Sbjct: 233 GLVAC--GFGVALVPESIAYSTLRERVQFRPIR---PIKDQPTPTMGLYMNWNTQN-ASP 286 Query: 303 KIVWLRETI 311 + + Sbjct: 287 ALGSFISML 295 >UniRef50_A5W321 Transcriptional regulator, LysR family n=3 Tax=Pseudomonas putida RepID=A5W321_PSEP1 Length = 293 Score = 231 bits (591), Expect = 2e-59, Method: Composition-based stats. Identities = 45/310 (14%), Positives = 98/310 (31%), Gaps = 25/310 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L C ++++ S TKAA+ +++ A+S ++ +L LF + + T Sbjct: 1 MNLKALRCCVEIVRQGSFTKAAQHLHIAQPALSMAVTRLEEELGVTLFNRTTRKVILTAE 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 +A ++ ++ + + L + + L + YP Sbjct: 61 GEQFLPRIASALREMDVARQELRDMADLKRGEVRLGIPPMFGLHYVPGLMNAFRKSYPGI 120 Query: 127 TIKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + + + + + + E+D+ +P + +L SD + Sbjct: 121 AMTVFEGSAEDIGHRLEQREIDLALLES----------RRVPPDKESILLGSDEMLACMH 170 Query: 186 KDHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 DHP + + + LD E G +A+ + Sbjct: 171 PDHPYAGKAYLTAEDLRNTDMVVFDRTFVQRHLLDAFFAEHGITYQVALQSNFVSLVVQ- 229 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 A DN+ +AT R Q +V +P + ++ F L W + Sbjct: 230 -AALDNMGVATLLRSVQQRTPG----IVGVPF------RPAQQMSFRLCWRSGEYLSLAS 278 Query: 305 VWLRETIKNL 314 + Sbjct: 279 KRFIDFAAQT 288 >UniRef50_B2Q0Q6 Putative uncharacterized protein n=1 Tax=Providencia stuartii ATCC 25827 RepID=B2Q0Q6_PROST Length = 295 Score = 231 bits (591), Expect = 2e-59, Method: Composition-based stats. Identities = 46/311 (14%), Positives = 98/311 (31%), Gaps = 22/311 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +D+ L ++Q ++AA+R+ VT A+S+S+ KL L V G+ T Sbjct: 1 MDIRSLRYFVEVVQLNGFSRAAERLFVTQPAISRSIQKLEQELGYTLLVRENDGVRLTDE 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHH-QTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + + ++ N + + P + + + +RYPQ Sbjct: 61 GEILLSHAKQILKQFNSMNKALKEKEGPLSGILNVGLPPVIASTYFADIIMAFSRRYPQV 120 Query: 127 TIKLRN-WDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 +K+ + ++A+ GEV+ D V SD + + Sbjct: 121 ELKILELGTHKMMEAMLNGEVETAAVMLPFDNEL----------FDLHVFSSDRLMLLVS 170 Query: 186 KDHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 + HP + + P I + + + G++ IA + M Sbjct: 171 EQHPLAMRNSVKFAELIDEPFIFFSEDFRINELVMSACGIYGKKPVIAGRSSHLDLVTAM 230 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 + + P + L ++ + + L L K + + + Sbjct: 231 VRA--GVGVTLLPDSMWNKTRADGLSIIPV-------IEPVLSYEVALATLKNSHQSRRA 281 Query: 305 VWLRETIKNLY 315 K + Sbjct: 282 KAWNALAKEML 292 >UniRef50_B3JNA3 Putative uncharacterized protein n=1 Tax=Bacteroides coprocola DSM 17136 RepID=B3JNA3_9BACE Length = 295 Score = 231 bits (591), Expect = 2e-59, Method: Composition-based stats. Identities = 34/313 (10%), Positives = 92/313 (29%), Gaps = 23/313 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L + + ++ ++AA+ ++++ S +S+ + +L D LF + T Sbjct: 1 MELRQLKYFKEACERQNFSEAARILHISQSTLSQQIKQLEEELDVLLFDRIGKRIVLTEA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTP-RGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + A + + + + +++ A + + YP+ Sbjct: 61 GQAFLPYAARAIYDAEDGKQIIRDLKGIETGVLHIGVTYSMSPLLI-AALQLFNRAYPKI 119 Query: 127 TIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 +++ + L + +D S + L + LFS +R Sbjct: 120 KVEITFATSEELLKQLDGSGLDFVLSFKPED---------LTDDFETIPLFSSRLQFIVR 170 Query: 186 KDHPALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 HP + L P I + ++ + ++ E T+ + + + + Sbjct: 171 SSHPLAGLSSITLKRLSETPLILPERGFATRKKIEELCRKHQLELTVGVEMDDVHTIIHA 230 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 + + L L W + + Sbjct: 231 LKS--GQWATILTQAAVRGEAGL--------VQIPILCNDHLTSRGFLFWPQGSYRKKSA 280 Query: 305 VWLRETIKNLYAS 317 + + + + A Sbjct: 281 LAFADFLLKITAG 293 >UniRef50_B4SSL0 Transcriptional regulator, LysR family n=8 Tax=Xanthomonadaceae RepID=B4SSL0_STRM5 Length = 322 Score = 231 bits (591), Expect = 2e-59, Method: Composition-based stats. Identities = 51/307 (16%), Positives = 104/307 (33%), Gaps = 23/307 (7%) Query: 10 LNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMV 69 L L ++ SV++AA+ + V+ A+S L L PLF S L P+ Sbjct: 18 LKPLRAFCQTVRLGSVSRAAEALFVSQPAISLQLQALERELGVPLFERSGRRLVPSREGQ 77 Query: 70 SMEQNLAEWMQMSNLLLDKPHH-QTPR-GLKFELAAESPLMMIMLNALSKQIYQRYPQAT 127 + + ++ + L + + +AA S ++ +L + ++ +P Sbjct: 78 LLYEMAQPLVENLDGLEARFRDKVRGLDAGELNIAANSSTILYLLPKIVERFRLHHPDVR 137 Query: 128 IKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRK 186 + L N D D + D+ ++ +P + Y + + Sbjct: 138 LTLHNAISADGTDLLREDAADLAIGS----------MTDVPADLSYAPAYRFEQVLIAPH 187 Query: 187 DHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMA 245 DHP L RYP + Q +D V Q T+A+ + +E Sbjct: 188 DHPLASGGELELADIARYPLVLPPKRQITYRLVDQVFQRHRIAYTVALEVGGWEVIKQYV 247 Query: 246 AQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIV 305 A + ++ P C +L ++ E + ++ + + + + Sbjct: 248 A--MGMGISIVPALCLNEADRERLAAR-------SMKRWFPERSYGVIVRRGKALSAQAR 298 Query: 306 WLRETIK 312 E I+ Sbjct: 299 AFIELIQ 305 >UniRef50_B6R6F6 Transcriptional regulator, LysR family n=1 Tax=Pseudovibrio sp. JE062 RepID=B6R6F6_9RHOB Length = 320 Score = 231 bits (591), Expect = 3e-59, Method: Composition-based stats. Identities = 41/293 (13%), Positives = 87/293 (29%), Gaps = 20/293 (6%) Query: 9 DLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLM 68 L L + L + S +KAA+ +T S +S S+ +L L S L T Sbjct: 10 TLKQLQYFKTLAKHLSFSKAAEACFITQSTLSASIKQLEGILGCELLDRSGRTLVLTEAG 69 Query: 69 VSMEQNLAEWMQMSNLLLDKPHHQ-TPRGLKFELAAESPLMMIMLNALSKQIYQRYPQAT 127 S+ + + ++ + L+ Q P +F L + +L Q+ YP+ Sbjct: 70 ESVLEKASLLLRDAEDLVQGVQAQNKPLCGRFRLGVIPSVAPFLLPRFLPQLRDLYPELQ 129 Query: 128 IKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRK 186 + LR + + A+ G +D + + SD + + Sbjct: 130 LFLREDISRNLMIALREGRIDAALMALPYDTT----------GFESAEIGSDAFYLAVPG 179 Query: 187 DHPALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMA 245 HP ++ + + + + + M Sbjct: 180 AHPLAGLSEVLMEDLANEVLLLLEDGHCLRNHVLAAAGGRMLTANEDVQATSLSTLVQMV 239 Query: 246 AQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRN 298 + + + PR + L + K ++W +++ Sbjct: 240 --DNGIGVTLVPRIAVDADIDRGTSL-----KLIKIADPKARRTIGMVWRRKS 285 >UniRef50_B0MH18 Putative uncharacterized protein n=4 Tax=Bacteria RepID=B0MH18_9FIRM Length = 304 Score = 231 bits (590), Expect = 3e-59, Method: Composition-based stats. Identities = 44/312 (14%), Positives = 98/312 (31%), Gaps = 22/312 (7%) Query: 6 TTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPT 65 +++L L L + ++ T AA + + SA+SK++ + D L + T Sbjct: 8 RSMNLKQLTYFVALAKNQNFTTAANELFICQSALSKTIKAMEEDLDVQLVDRTAKRFCLT 67 Query: 66 PLMVSMEQNLAEWMQMSNLLLDKPHH-QTPRGLKFELAAESPLMMIMLNALSKQIYQRYP 124 P + Q + ++ N ++ + + + I ++ + + YP Sbjct: 68 PEGRMLYQEGRDALESINNQMEHLRDCINAENGEISVGIPPVISTIYFASIIQGFRKAYP 127 Query: 125 QATIKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVW 183 + + +++ + + GE+DIG +F + Sbjct: 128 GIRLVIAEEGANTVKEKVQSGEIDIGVVILPFAS----------DDFHILPVFKSDNVLT 177 Query: 184 LRKDHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 + DHP + IS+ + G E I M +++ Sbjct: 178 VSTDHPFAGREKAAFRELRNEEFISLDKTFMLHSRTRELCHMSGFEPNIVMESSQWDFVA 237 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 M N +A PR ++ ++ L + + L+ K + Sbjct: 238 EMV--SLNQGVAILPRPILSRFNSDKIKILTL-------TEPEFPWDIALIIRKDKYVSN 288 Query: 303 KIVWLRETIKNL 314 I + +K Sbjct: 289 PIRHFQTYVKEH 300 >UniRef50_Q2T4U0 Transcriptional regulator, LysR family n=2 Tax=Burkholderia RepID=Q2T4U0_BURTA Length = 299 Score = 231 bits (590), Expect = 3e-59, Method: Composition-based stats. Identities = 53/315 (16%), Positives = 105/315 (33%), Gaps = 21/315 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++ L +++ SVT A+ R++V+ A+++ + L LF P G+SPT Sbjct: 1 MNFTHLSAFLAVVEAGSVTGASARLHVSQPALTREIRDLEERLGVVLFDRRPRGMSPTEA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + +++ + +LAA + +L + RYP Sbjct: 61 GRLLAGYAKRIFALTDEAEAALDEFSGLVRGNLKLAASRTIGSYLLPPVLDVFCDRYPGV 120 Query: 127 TIKLRNWDYDSLD-AITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 TI + + + ++ A+ E +GF + D V D Sbjct: 121 TIDVAEMNTELVEAALLTYERQLGFVEGAYDTTA----------FDSMVFGRDTLLAVAA 170 Query: 186 KDHPALHQ-TWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 HP + + +S A++ E G E +S+ E + Sbjct: 171 SSHPLARKHRVGVQDIADCDVLSREPGSGTRNAVETAFAEHGLEFAPRLSVGSAEAMNRL 230 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 + + + R+ LV L + +E T++WHK + +P Sbjct: 231 LLRGNAIAW--VSRFTIEAELEAG-ALVPLRV-----TDMTVERDLTIIWHKGATLSPSA 282 Query: 305 VWLRETIKNLYASMA 319 R+ + + A Sbjct: 283 RIFRDLLVEQARARA 297 >UniRef50_B8CTJ9 Regulatory protein, LysR:LysR, substrate-binding n=1 Tax=Shewanella piezotolerans WP3 RepID=B8CTJ9_SHEPW Length = 295 Score = 230 bits (589), Expect = 4e-59, Method: Composition-based stats. Identities = 49/320 (15%), Positives = 105/320 (32%), Gaps = 28/320 (8%) Query: 1 MKKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPL 60 M I L C L++ + T+AA+++++T ++K + +L PL + + Sbjct: 1 MNIQIKN-----LHCFVTLVEMGNYTRAAEKLHLTQPTLTKMIQRLEENLGQPLLIRNNQ 55 Query: 61 GLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQI 119 + T ++ + + + L + + + L + +++ L Q Sbjct: 56 KVIATEAGRALICTSQQIVGQWHRLREDLNSLNGLQTGQLRLGVCPMMGEMII-ELVAQF 114 Query: 120 YQRYPQATIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSD 178 ++YP + ++ + A+ +D+ F+ + D L Sbjct: 115 RKKYPGVELSIQELGGFGAEQALLNDSLDLTFTALPTTHTQ---------EFDSLELRGY 165 Query: 179 VPCVWLRKDHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPE 237 L K+HP YP I + S T + + + E +A + Sbjct: 166 PLLACLPKEHPLAEKDNIGWQDLAPYPFILYNDDFSLTKLIHRLSRSANVELNVAAQSGQ 225 Query: 238 FEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKR 297 ++ M + +A P+ L AL + +L L+W K Sbjct: 226 WDFIAAMVEAK--MGVAILPKPICQKVNSDSLVYKAL--------KPQLTWDLALIWRKN 275 Query: 298 NSHNPKIVWLRETIKNLYAS 317 P + L A+ Sbjct: 276 LPLTPAASTFINLSRELSAT 295 >UniRef50_C6ARG9 Transcriptional regulator, LysR family n=7 Tax=Proteobacteria RepID=C6ARG9_RHILS Length = 310 Score = 230 bits (589), Expect = 4e-59, Method: Composition-based stats. Identities = 67/314 (21%), Positives = 132/314 (42%), Gaps = 21/314 (6%) Query: 9 DLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLM 68 DLNLL LM+ER+VT+AA+++ +T AVS +L +LR DPLF+ G+ PT + Sbjct: 4 DLNLLPVFVALMEERNVTRAAEQLGMTQPAVSNALNRLRETLRDPLFIRERYGMKPTEMA 63 Query: 69 VSMEQNLAEWMQMSNLLL--DKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 ++ + + + ++ + +F +A S + +++ + ++ + P Sbjct: 64 EALAPVIRGALASLDDVILGQQAFDPARATRQFTIAPNSYVEFVLMPVIVARLRECAPGI 123 Query: 127 TIKLRNWDYDSLD-AITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 ++L + D + G ++ + P + + L D +R Sbjct: 124 RLRLTPFGNDLAETGAMSGATEMVLGR----------IVEPPDNMVVQHLMDDGLACVVR 173 Query: 186 KDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMA 245 KDHP + ++ + + + R H+++ L +LQ+ G R +++S+ F M Sbjct: 174 KDHPEIAESISEEQYQRMRHVNVLPPGRMRVGLFQMLQQAGLRRDVSVSVTHFLAVPEMV 233 Query: 246 AQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIV 305 A D C + +L ++ P+ P L WH R ++P Sbjct: 234 AVTDYCA-TLPRLICHRLARDPRLKVLPAPVDL-------GRFPVELAWHVRYRNDPAHR 285 Query: 306 WLRETIKNLYASMA 319 WLR I + ++ Sbjct: 286 WLRSLISEVAKEVS 299 >UniRef50_B0V4K3 HTH-type transcriptional regulator n=13 Tax=Acinetobacter RepID=B0V4K3_ACIBY Length = 299 Score = 230 bits (589), Expect = 4e-59, Method: Composition-based stats. Identities = 35/313 (11%), Positives = 96/313 (30%), Gaps = 26/313 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L + +E + +KAA ++ ++S+ + L L + + T Sbjct: 1 MELRHLRYFITVAEELNFSKAALKLYTAQPSLSQQIKDLEEDVGVRLLNRTKRKVELTEE 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRGLK-FELAAESPLMMIMLNALSKQIYQRYPQA 126 ++ + ++ + + + + M + + + ++P Sbjct: 61 GEVFLEHARLTLAQADKAVAMARQVSKAKQQLLRIGFVPIAEMKIFPYVLPNLRLQHPDL 120 Query: 127 TIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 TI+L + + + L A+ RGE+DI F+ ++ I + + ++ L Sbjct: 121 TIELSSLNNAEQLKALKRGELDITFTRD----------NTENDEIQSQFVLTEPLIFLLP 170 Query: 186 KDHPALH-QTWNLDTFLRYPHISI--CWEQSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 ++HP + I + + + G + I ++ Sbjct: 171 RNHPLAKYDHIPVKALHGIDFIIPAAEQSNTLHNTILEFTKTHGIDLNIVQKADSILLNI 230 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 L P Y + + L + + + K + Sbjct: 231 NSI--GSGLGCTILPAYVAPLG-VSNTVVRPLDVELPSL-------DLFVSYRKNTE-SV 279 Query: 303 KIVWLRETIKNLY 315 + + + ++ Sbjct: 280 GVKRFIDQLNKVF 292 >UniRef50_B4X4B4 LysR substrate binding domain protein n=1 Tax=Alcanivorax sp. DG881 RepID=B4X4B4_9GAMM Length = 304 Score = 230 bits (589), Expect = 4e-59, Method: Composition-based stats. Identities = 70/320 (21%), Positives = 132/320 (41%), Gaps = 23/320 (7%) Query: 1 MKKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPL 60 MK ++ ++DLNLL +M+ +++AA+ + ++ A+S +L +LR F D LFV + Sbjct: 1 MKLNLRSIDLNLLPVFDAIMEAGQLSRAAESLGMSQPAISAALQRLRHTFGDTLFVRTHH 60 Query: 61 GLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQ 118 G++PTP + L + L+ + P F + + M++L L Sbjct: 61 GMTPTPRARELHDQLGPQLVALRDTLNPENRFDPATSQRHFRILSVDYFEMVVLGPLLAT 120 Query: 119 IYQRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSD 178 + Q+ P +++ D D D + +G D+ S + + + VL + Sbjct: 121 LRQQAPHVVLEIIAADDDMPDELHKGRADL----------SVDAFVADDDRLQRNVLLEE 170 Query: 179 VPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWA-LDNVLQELGRERTIAMSLPE 237 V R+ HP + + FL H+ + + LD +L G +R + + Sbjct: 171 KLVVIARRSHPHIKGHCDKQQFLDAEHVVLP--NRNRQLPLDQILNAPGWQRRTGARVTQ 228 Query: 238 FEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKR 297 F L + D + R Q Y + QL ++ P+ VP ++W Sbjct: 229 FASMLAVCGGSDLIA-TVPDRLAQQYAETMQLQVLPFPVALP-------PVPIYMIWSPT 280 Query: 298 NSHNPKIVWLRETIKNLYAS 317 +P WLR+ +++ A Sbjct: 281 QQRDPAHRWLRQQLEHTIAQ 300 >UniRef50_Q12M05 Transcriptional regulator n=3 Tax=Gammaproteobacteria RepID=Q12M05_SHEDO Length = 309 Score = 230 bits (589), Expect = 4e-59, Method: Composition-based stats. Identities = 69/318 (21%), Positives = 134/318 (42%), Gaps = 19/318 (5%) Query: 1 MKKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPL 60 M ++ LDLNLL+ +M+E+S++ AA+++ +T +VS ++A++R + DPLF+ Sbjct: 1 MSAGMSKLDLNLLVIFDAIMKEQSISAAAEQLAMTQPSVSNAVARMRHNWKDPLFIKQGR 60 Query: 61 GLSPTPLMVSMEQNLAEWMQMSNLLLDK-PHHQTPRGLKFELAAESPLMMIMLNALSKQI 119 G+ P+P +++ Q +A ++ + + F +A + AL + + Sbjct: 61 GIKPSPFALALWQQVASPLEQIRSAVSSKTFNAAHSERTFRIAITDGTSGLFWPALRRHL 120 Query: 120 YQRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 + P+ + + D + EVD+ + I + LF + Sbjct: 121 ERHAPKINLHAVPYKLDGEALLVNAEVDLVLDY----------YENRHPQILSQHLFDNQ 170 Query: 180 PCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFE 239 + K H +T LD F H+ + + +D L +LG R IAM++ F Sbjct: 171 FVCVMAKAHALSEKTLTLDDFAAAEHLLVSLSGDASGTVDRKLAQLGHSRRIAMTVNSFA 230 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 + + + + + L +L + LP VP ++ WH RN Sbjct: 231 SAKTLIEESRLIS-TLPYSIIASWQSLDKLTVKTLPFTVP-------SVPISMAWHSRND 282 Query: 300 HNPKIVWLRETIKNLYAS 317 + + WLRE I ++ + Sbjct: 283 ASISLRWLREAIVDIVKT 300 >UniRef50_Q1DBN8 Transcriptional regulator, LysR family n=2 Tax=Cystobacterineae RepID=Q1DBN8_MYXXD Length = 301 Score = 230 bits (588), Expect = 5e-59, Method: Composition-based stats. Identities = 38/317 (11%), Positives = 85/317 (26%), Gaps = 26/317 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++ L + +E +AA RI + S+ + +L + L + ++ T Sbjct: 1 MEFRQLQLFVAVAEELHFGRAAARIGMAQPPFSQQIRRLESELGVELLTRTSRRVALTAA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQT-PRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + ++ + ++ + + +L + + R+P+ Sbjct: 61 GSRLLEDARALLARRADVIHSVQQAASGETGTLRVGFAASSAFGVLPDIVLRFRTRFPKV 120 Query: 127 TIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 ++L + + D A+ GE+DI + E L + + L Sbjct: 121 KLELDDSETLDVGAALVSGELDIAIIRAPFR----------HEGLTVERLLQERFVLALP 170 Query: 186 KDHPALHQT-WNLDTFLRYPHISICWEQ--SDTWALDNVLQELGRERTIAMSLPEFEQSL 242 HP Q L + P + + ++ G I + + Sbjct: 171 ARHPRARQQVVALSSLANEPFVLFPRHSAPGLHDLVTSMCLGAGFSPNILQEASSWPSVV 230 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 M L +A A L + F + + P Sbjct: 231 GMVEAGLGLTIAPASSQA----------LCPKGVVFRPLSGAPGHAELVVAF-PGTRPAP 279 Query: 303 KIVWLRETIKNLYASMA 319 R + Sbjct: 280 AAQHFRVLAHEAVSRSG 296 >UniRef50_A6GDN8 Transcriptional regulator n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GDN8_9DELT Length = 318 Score = 230 bits (588), Expect = 5e-59, Method: Composition-based stats. Identities = 45/318 (14%), Positives = 85/318 (26%), Gaps = 26/318 (8%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 ++ L L L L + + A++ V+ A+SK + ++ LF + + Sbjct: 1 MNLP--TLRQLEYLVALAETGHFGETARQCGVSQPALSKQVREVEGLLGLTLFERARPRV 58 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQIYQ 121 TP + + + L+ + L + L L ++ + Sbjct: 59 IVTPAGEDIVARARRVLAGARELVSAADAWSGARRGTLRLGVIPTIAPYGLPGLLAKLRE 118 Query: 122 RYPQATIKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 YP+ + + D LD + G VD+G L + Sbjct: 119 LYPEVSYAIHELQTDVLLDQLRAGAVDLGLLAHPFDAAGLAGPD----------LVVEPF 168 Query: 181 CVWLRKDHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFE 239 + K HP + I + V G +++ Sbjct: 169 VLVAPKGHPLATRGALEPEEITGASLILMQDGHCLRDQAIEVCALAGPPPPTSVAAASVS 228 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 + M L P + LV TL W Sbjct: 229 TLVRMVES--GLGATLLPASALPVEVRNNQGLVVRGFAKPP-----PGRTLTLQWRAS-- 279 Query: 300 HNPKIVWLRETIKNLYAS 317 +P W + I ++ S Sbjct: 280 -SPHAQWFAD-IADVLRS 295 >UniRef50_A6DK62 Hydrogen peroxide-inducible genes activator n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DK62_9BACT Length = 293 Score = 230 bits (588), Expect = 5e-59, Method: Composition-based stats. Identities = 45/315 (14%), Positives = 96/315 (30%), Gaps = 30/315 (9%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 + L +L +E+ +A+ + V+ A+S + K+ A LF S + +P Sbjct: 1 MTFKDLEYFAILAKEKHFGQASVQAGVSQPALSIQIKKMEAELGVCLFERSNRQVVLSPE 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQ-TPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + + ++ P + L A L + + +++Q YP+ Sbjct: 61 GEVLLERAQKILRQVEDFQTCARQFKDPYQGQLILGAFPTLAPYLFPQIIDELHQSYPEM 120 Query: 127 TIKL-RNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + L + G+VD F + +D E +FS+ Sbjct: 121 KFFIKEEKTETLLKMLKEGKVDAAFIALPHEDST----------LDSEFIFSEEFLFATP 170 Query: 186 KDHP-ALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 ++P +L + + + + E M Sbjct: 171 ANYPEDFPNELSLQSLKGRELMLLDEGHCFRDQALELCSVNQARENFDFRASSLETLRHM 230 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 A L + P+ Q + + + + + L W K +PK Sbjct: 231 VAA--GLGVTLIPKCAQDESAK---------IKYMKFSDPSPKREIALFWRK---TSPKA 276 Query: 305 VWLRET---IKNLYA 316 RE +++L+ Sbjct: 277 EIFREIADDLRDLFK 291 >UniRef50_Q0F2Z7 Transcriptional regulatory protein, LysR family n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0F2Z7_9PROT Length = 308 Score = 230 bits (588), Expect = 5e-59, Method: Composition-based stats. Identities = 42/321 (13%), Positives = 80/321 (24%), Gaps = 22/321 (6%) Query: 1 MKKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPL 60 M+ + L ++ ++ S T+AAK + +T AVS + ++ LF S Sbjct: 1 MRVVFMHISLKQFKIIEAVVDYNSYTEAAKALYMTQPAVSMQIKQIEGQLGLQLFERSGK 60 Query: 61 GLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQI 119 + T + Q K L + L Sbjct: 61 QIKATEAGKELLHYARNIRQQMEEAKTVLEELKGLKRGKLHL-TMASTASYFAPRLLAAF 119 Query: 120 YQRYPQATIKL-RNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSD 178 + +YP + L LDA+ D+ GR + + + Sbjct: 120 HHQYPGVKVTLDVTNRSGLLDALDNNTTDMAIMGRPPEGHA----------LTGIPFLDN 169 Query: 179 VPCVWLRKDHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPE 237 V +HP + L I A + E T M + Sbjct: 170 PLVVIAWPEHPLACSDSIPLSDVADESFIVREAASGTRMATERYFSEHRLSLTPGMEMNR 229 Query: 238 FEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKR 297 E L + + L + + + + ++ Sbjct: 230 SEAIKQAVMAELGLGIVSLHTIEMELTLKR--------LVILKVEDFPIMRHWYIVHRNN 281 Query: 298 NSHNPKIVWLRETIKNLYASM 318 R+ + S+ Sbjct: 282 KRFAAIQKVFRDFAVSESRSL 302 >UniRef50_A8GI93 Transcriptional regulator, LysR family n=3 Tax=Enterobacteriaceae RepID=A8GI93_SERP5 Length = 292 Score = 230 bits (587), Expect = 6e-59, Method: Composition-based stats. Identities = 47/306 (15%), Positives = 96/306 (31%), Gaps = 24/306 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L + + +E+S T+AA+R + SA+S +AKL LF + + T Sbjct: 1 MNLKQIRFALAVAEEQSFTRAAQRCHTVQSALSHQIAKLEEELGCTLFERTSRRVRLTTA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTP-RGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + Q + L+++ + + S + I L ++ YP Sbjct: 61 GQAFIQPAQRLLAAKQALVEEVVAASGTVSGTLTIGTISTINAIDLTEKLGNFHRHYPAV 120 Query: 127 TIKL-RNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 I+L L+ + + + D+ F G + + L + + Sbjct: 121 NIRLYVGMSEALLEDVRQQKTDVAFVGLWPGDIDMLP-------VSHRQLTDEPLVALVA 173 Query: 186 KDHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 HP Q NL T P + D Q G +R ++ + E + Sbjct: 174 TQHPLASRQRVNLQTLSEVPLVDFYSGTGARRQTDRAFQAAGIKRHVSFEIDHIEWLENL 233 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 + + Q + LV++P+ +W + + Sbjct: 234 VRRGLAAGIVPI-STAQRLSS-----LVSIPIE------DGPRRQVYCVWPQ--PLSRTA 279 Query: 305 VWLRET 310 + Sbjct: 280 ERFLQF 285 >UniRef50_P73123 Probable RuBisCO transcriptional regulator n=81 Tax=cellular organisms RepID=RBCR_SYNY3 Length = 345 Score = 230 bits (587), Expect = 6e-59, Method: Composition-based stats. Identities = 47/316 (14%), Positives = 89/316 (28%), Gaps = 21/316 (6%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 S L+ L L+ + E S +AA + V+ AVS + L PLF Sbjct: 1 MSDIPFTLDQLRILKAIASEGSFKRAADTLYVSQPAVSLQVQNLEKQLSVPLFDRGGRKA 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNALSKQIYQ 121 T + + + + + A +L + Q Sbjct: 61 QLTEAGHLLLNYGEKIITLCQETCRAIEDLQNLQGGTLIVGASQTTGTYLLPRMIGMFRQ 120 Query: 122 RYPQATIKLRNWDYDSLDA-ITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 +YP T++L+ + G+VD+ G E +E + D Sbjct: 121 QYPDVTVQLQVHSTRRTAWGVANGQVDLAIIGGEVPAELQET-------LTVLPYAEDEL 173 Query: 181 CVWLRKDHPALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGR---ERTIAMSLP 236 + L HP +T + + IS+ + + +D VL + I M L Sbjct: 174 ALILPVLHPLAQAETIQKEDLYKLKFISLDSQSTIRKVIDKVLSQGEIDTKRLKIEMELN 233 Query: 237 EFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHK 296 E L A + L + ++ +++ + Sbjct: 234 SIEAIKNAVQS--GLGAAFVSTTAIEKELEMNV------LHIAPIKNVEIRRVLSVIINP 285 Query: 297 RNSHNPKIVWLRETIK 312 + + Sbjct: 286 NRYRSKASAAFIREVL 301 >UniRef50_B1I114 Transcriptional regulator, LysR family n=1 Tax=Candidatus Desulforudis audaxviator MP104C RepID=B1I114_DESAP Length = 296 Score = 230 bits (587), Expect = 7e-59, Method: Composition-based stats. Identities = 41/311 (13%), Positives = 98/311 (31%), Gaps = 24/311 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L+ L ++ + +S ++AAK +++T AVSK ++ L A + L + + T Sbjct: 1 MNLSYLETFVMVAKHKSFSRAAKTLSLTQPAVSKHISLLEAHYGTKLVNRTSRRVELTDA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + + ++ + + + A + +L + + YP Sbjct: 61 GIVLYHFAGRIIATMERAKEEIVSFSEEVKGRLSIGASTIPGHYILPRILSDFKKEYPLV 120 Query: 127 TIKL-RNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + L + ++ + + +G G I+ SD + + Sbjct: 121 NVSLEVSNTGKVINRLQEEAIQVGVIGAPVDSP----------EINCTEFSSDEVVLIMP 170 Query: 186 KDHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGR---ERTIAMSLPEFEQS 241 +DHP + + D + + + ++ L IA E Sbjct: 171 RDHPLVFRKELVTDDLVGEKVVVRENDSGTRRIVEEKLAAADIPLDSLQIAGEFGSTEAV 230 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 L L ++ R+ L + Q + +++ + S + Sbjct: 231 LAAVEA--GLGISFVSRWAAEKVALEG------RIVMRTLQDLRFSRSLYIIYLRDRSLS 282 Query: 302 PKIVWLRETIK 312 IK Sbjct: 283 RPTHAFLSFIK 293 >UniRef50_B4CXF3 Transcriptional regulator, LysR family n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CXF3_9BACT Length = 309 Score = 230 bits (587), Expect = 7e-59, Method: Composition-based stats. Identities = 35/303 (11%), Positives = 85/303 (28%), Gaps = 22/303 (7%) Query: 18 LLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSMEQNLAE 77 + + + T+AA++ V+ ++S+ + KL + LF T + + Sbjct: 26 AVARAGNFTRAAEQCRVSQPSLSQQIQKLEEELGERLFDRMKRQTKLTSYGEAFVRRAVR 85 Query: 78 WMQMSNLLLDKPHHQTP-RGLKFELAAESPLMMIMLNALSKQIYQRYPQATIKLRNWDY- 135 ++ + + L + + + +L ++YP + ++ Sbjct: 86 ILEEAEMALREATDAKSLLSGMLTIGVLPTIAPYLLPEAISAFARKYPGVEVVVQEDTTG 145 Query: 136 DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPALH-QT 194 L +T E+D + E+ + + HP +T Sbjct: 146 HLLKHLTTYEIDFAIASNPIEDSRFEIQELFAEELLLAL----------PAGHPLARKRT 195 Query: 195 WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQPDNLLLA 254 I + + + + T++ + E + A L L+ Sbjct: 196 VPASALKGERLIVMREGHCLGDQVLGFCEHREMKPTVSFRSAQLETIYALVAA--GLGLS 253 Query: 255 TAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWLRETIKNL 314 P + + L L Q + E +W K+ + + Sbjct: 254 LIPAMAAATERANALELR-------SIQAPRPERKILAVWPKQRPLGRAARVFLDLMSAR 306 Query: 315 YAS 317 Sbjct: 307 SKR 309 >UniRef50_O32255 Uncharacterized HTH-type transcriptional regulator yvbU n=78 Tax=Bacillus RepID=YVBU_BACSU Length = 292 Score = 230 bits (587), Expect = 7e-59, Method: Composition-based stats. Identities = 48/314 (15%), Positives = 98/314 (31%), Gaps = 27/314 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPL-GLSPTP 66 + + L + + S TKA + +N+T AVS +++ + A D L + GL T Sbjct: 1 MTITQLKVFVKIAETGSFTKAGQALNMTQPAVSHAISAIEAELDVKLIIRDRRNGLMLTD 60 Query: 67 LMVSMEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNALSKQIYQRYPQ 125 + ++ E ++ + + + S + L + Q+YP+ Sbjct: 61 TGKQILVHIREVLKGIEKVEQVAAAEKGLELGTIHIGTFSTASAYFMPKLISEFKQKYPK 120 Query: 126 ATIKLRNWD-YDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 + L + + + +D+G + ++Y L D V L Sbjct: 121 LELVLHEGTVNEVKEWLHTRMIDVGILLYPTE------------EMEYIHLKKDKMAVVL 168 Query: 185 RKDHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 R DHP H L P I + ++ ++ G A ++ S+ Sbjct: 169 RDDHPLASHSAITLKDLDHEPMIV--CDGGYESPFIDMFRQAGATLHPAFTVYNINTSIS 226 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 M + L + + + L ++ L + Sbjct: 227 MIREGLGLAI-LSEMSMSGMPLPEHVVTREL--------DPQVYRDVQLAVPSLKEASLA 277 Query: 304 IVWLRETIKNLYAS 317 E K L+ + Sbjct: 278 AKLFIEMAKELFGA 291 >UniRef50_C7GBJ0 Transcriptional regulator, LysR family n=1 Tax=Roseburia intestinalis L1-82 RepID=C7GBJ0_9FIRM Length = 298 Score = 230 bits (587), Expect = 7e-59, Method: Composition-based stats. Identities = 44/312 (14%), Positives = 94/312 (30%), Gaps = 25/312 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L L + + TKAA + +T ++S ++++L A LF S + T Sbjct: 1 MNLFQLRYFVTLAKMQHYTKAAHELCITQPSLSHAISQLEAELGVALFEKSGRNTTLTSF 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYP--Q 125 + + + L L + + L+ + +P Sbjct: 61 GEEFLICANRTLATLDSGVSSLQRSARGDGLIRLGMLRSLGVSFIPQLAARYLASHPEHD 120 Query: 126 ATIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 D ++ ++ + D+ F S +D + + + + Sbjct: 121 VRFTFHTGSTGDLVNGLSARDYDLIFCSMPPETES----------LDTVPITHEDLVLIV 170 Query: 185 RKDHPA-LHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 HP Q+ L L YP I +D++ ++ IA E E Sbjct: 171 PGHHPLAAKQSVALTETLIYPQIYFSHGSGMRAVVDHLFSQINAVPQIAYETEEAEVIAG 230 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 + AQ + + L+ L + + E ++ ++ P Sbjct: 231 LTAQGFGIAVVPYMDL-----------LLKLDVKILQISAPVWERNLYMIHDRQAFMPPA 279 Query: 304 IVWLRETIKNLY 315 + E + Sbjct: 280 VRNFCEFVLKEC 291 >UniRef50_Q6MJZ8 Transcriptional regulator, LysR family n=1 Tax=Bdellovibrio bacteriovorus RepID=Q6MJZ8_BDEBA Length = 318 Score = 230 bits (587), Expect = 7e-59, Method: Composition-based stats. Identities = 48/313 (15%), Positives = 93/313 (29%), Gaps = 27/313 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 + L L + + S + AA++ +VT +S + KL LF + + PT + Sbjct: 1 MTLTQLEYILAVADTGSFSHAARQCHVTQPTLSMQIQKLEEELGVILFDRTKQPIRPTSV 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTP-RGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + Q ++ S L + + + L +L K+I + + Sbjct: 61 GEEVLQQARLVVKGSQHLKEIVDDAKGSLRGELRIGIIPTLAPYLLPLFLKKIKDAHSRL 120 Query: 127 TIKLRNWDYDS-LDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + + ++ I +D+G L I VLF + V+L Sbjct: 121 HLTFEELQTEVMIEKIRNHSLDLGIVVTPID----------DLNIANHVLFYEPFNVYLS 170 Query: 186 KDHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQE----LGRERTIAMSLPEFEQ 240 K HP L +T + + + ++ + ER+ + E Sbjct: 171 KGHPLLTQKTLDEKDLSSEDVLLLNEGHCFREQSLSLCRNKKVPAAMERSFSFESGSLET 230 Query: 241 SLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 + Q + P Q + +L+ Sbjct: 231 LKKLVDQGE--SFTLLPYLAAMDVQDKK--------RLRPFSDPVPTREVSLVHGPHFQR 280 Query: 301 NPKIVWLRETIKN 313 + L ETIK Sbjct: 281 KALLKALIETIKR 293 >UniRef50_Q3KA14 LysR family regulatory protein n=24 Tax=Bacteria RepID=Q3KA14_PSEPF Length = 314 Score = 230 bits (587), Expect = 7e-59, Method: Composition-based stats. Identities = 66/320 (20%), Positives = 135/320 (42%), Gaps = 25/320 (7%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 +++ +DLNL + + E ++T+A + + +T AVS +LA+LR F+DPLFV + G+ Sbjct: 1 MNLSKVDLNLFIVFDAIYTEANLTRAGQIVGITQPAVSNALARLRETFNDPLFVRTAQGM 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGL--KFELAAESPLMMIMLNALSKQIY 120 PTP+ ++ + + + + + + P + ++ ++L L +++ Sbjct: 61 VPTPMAQNIIGPVRNALSLLRVSVQESRIFNPSQAVKTYRISMTDLTEAVILPPLFQRLR 120 Query: 121 QRYPQATIK-LRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 + P I+ + ++ + G +D + + + + L D Sbjct: 121 RLAPTVIIESFLSKRRETTKELAAGRLDFAV----------DAPLNTDPQVRHVKLMEDR 170 Query: 180 PCVWLRKDHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEF 238 +RK HP + + LD +L HI I +S +D L ++G +R IA+ + Sbjct: 171 YVCAMRKGHPLATKEKFTLDDYLSLTHIHISSRRSGLGHVDLALGKMGIQRKIALRSQHY 230 Query: 239 EQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRN 298 + + Q D ++ + + + H L LP+ V L WH+ Sbjct: 231 LMASQVLQQTDMVMTVP-----ERFARRHDLHAFNLPV------NDVPPVETHLYWHEST 279 Query: 299 SHNPKIVWLRETIKNLYASM 318 +P W+RE + L + Sbjct: 280 DQDPANRWMREQMIELCQQV 299 >UniRef50_UPI000178A79D transcriptional regulator, LysR family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI000178A79D Length = 291 Score = 229 bits (586), Expect = 8e-59, Method: Composition-based stats. Identities = 48/308 (15%), Positives = 99/308 (32%), Gaps = 21/308 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L + + +S TKAA + S+V+ + KL + LF GL T Sbjct: 1 MELIYLQTFREVAVRKSFTKAADELGYAQSSVTTQIQKLEKEYGVKLFERYGRGLRLTKS 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQAT 127 + + + + + +K G + L L ++ ++ Q + Sbjct: 61 GEELFKYAVQMLDLFQQSKEKLT--KQGGGILSIGTIDSLAAYFLPSVLHRLRQEHEDLA 118 Query: 128 IKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRK 186 I+L+ D + + GE D+G ++++ + + + Sbjct: 119 IRLQTDREDSIVSKVREGEYDLGLI---------LENKPEDTSLNWISIREEPLHLIAHP 169 Query: 187 DHPALHQTW-NLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMA 245 DHP L+ Y I + L+ VL+ G I + L E Sbjct: 170 DHPLHRLPVIELEHLADYEWIMTEDTCNYRIMLEKVLRASGAPVRIGLELGNPEAIKRYI 229 Query: 246 AQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIV 305 ++ PR L Q + + ++ H + + + Sbjct: 230 MSGTG--ISLLPRMVAEEEIKRG------ELAILPFQHPDIRLDIQIVVHPKKWLSHSLQ 281 Query: 306 WLRETIKN 313 + E +K+ Sbjct: 282 DMIEMLKS 289 >UniRef50_D2R7I4 Transcriptional regulator, LysR family n=6 Tax=Planctomycetaceae RepID=D2R7I4_9PLAN Length = 288 Score = 229 bits (586), Expect = 8e-59, Method: Composition-based stats. Identities = 32/308 (10%), Positives = 102/308 (33%), Gaps = 22/308 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L+ L + Q + T+AA+ + ++ A+S+S+ KL P+F + T Sbjct: 1 MELDQLRYFLKVAQRGNFTRAAEELMISQPALSRSIQKLEEELGQPVFERKTRSVLLTDA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQAT 127 ++ + + + + + + + A + L + ++ ++P+A Sbjct: 61 GTLLQARSQQVLTILEDTKSEITD-DGQCGRVRVGAIPTIAPYFLPEVLQRFSAKFPKAN 119 Query: 128 IKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRK 186 + ++ D + + +GE+D+ + E+ + + Sbjct: 120 LIVQENTTDVLIKSCRQGEIDLAILVLPVPAKYLEVEELFEEELLLVL----------PP 169 Query: 187 DHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMA 245 H + + +P + + + + + ++ + + + + Sbjct: 170 HHALVEKDKIRVADVEPFPFVLLDEAHCLSDNIVSFCRQRSFQPVVVERTSQLTMVQELV 229 Query: 246 AQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIV 305 ++ P + +Q + + +K + W+ + +V Sbjct: 230 --SLAHGISLIPAMARQCDQSQRRVYRSF-------TGRKPTRTVAVAWNPYRFQSRLLV 280 Query: 306 WLRETIKN 313 RE ++ Sbjct: 281 AFRECLRR 288 >UniRef50_Q1GMF7 Transcriptional regulator, LysR family n=1 Tax=Ruegeria sp. TM1040 RepID=Q1GMF7_SILST Length = 295 Score = 229 bits (586), Expect = 9e-59, Method: Composition-based stats. Identities = 37/311 (11%), Positives = 83/311 (26%), Gaps = 27/311 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 + L L + +S T A+R+ ++ AVS +L L + LF + TP+ Sbjct: 1 MTFGQLEIFVALSEAQSFTLTARRLGISQPAVSHALKSLETALNVSLFDRQGSQIVLTPI 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAE-SPLMMIMLNALSKQIYQRYPQ 125 + + E + +S + + + + + + +L L ++ YP Sbjct: 61 GAQLLERAREILGLSRTMQQEAASFRGLDTGSLRIGSFGATSSLQLLPDLMSAFHRAYPG 120 Query: 126 ATIKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 + + D + + +D+GF + + +D + Sbjct: 121 IDVFIEEAADDIIVKWLEERRIDMGFVVLP------------DDRFETIPIATDQFVALV 168 Query: 185 RKDHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 + + L P I + + G + +L Sbjct: 169 PRQSALAKQERVTLSDLCNDPFIMPESGSV--KIVSALFAAAGLTPQTRYRTSQLLSTLS 226 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 M ++ ++ L H +P Sbjct: 227 MV--GRGQGVSVVAEMAVPAAHPDNPWVIRP-------LSPAHPRMIGLALHPTAVRSPA 277 Query: 304 IVWLRETIKNL 314 + K L Sbjct: 278 VTAFLRIAKTL 288 >UniRef50_A1WRT3 Transcriptional regulator, LysR family n=1 Tax=Verminephrobacter eiseniae EF01-2 RepID=A1WRT3_VEREI Length = 315 Score = 229 bits (586), Expect = 9e-59, Method: Composition-based stats. Identities = 73/318 (22%), Positives = 129/318 (40%), Gaps = 20/318 (6%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 ++ +LNLL + + RSV+ AA+ +++T AV+ +L KLR FD+PLFV + G+ Sbjct: 1 MDLSEFNLNLLTFFDAIYRHRSVSAAAQELDLTQPAVTAALNKLRVHFDNPLFVRTSNGM 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKP-HHQTPRGLKFELAAESPLMMIMLNALSKQIYQ 121 PTP ++ +A + L + +F++ MM+ L + + + Q Sbjct: 61 HPTPWADALAPKIAHVLDSVRRLDEPTPFQPQSAKNQFKIYVNDIGMMLALPKIVQLLNQ 120 Query: 122 RYPQATIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 P + + + + ++A+ GE+D+ +P + L Sbjct: 121 DAPHTQLTVIDLRQDEVVNALDVGEIDLAIGY----------FVGVPNWARQQHLRDTSY 170 Query: 181 CVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQ 240 +RKDHP++ T L +L H S LD L + G R IA+ +P Sbjct: 171 VCAMRKDHPSIGDTMTLTQYLNARHAMYWTHGSTYGRLDEALAKRGFSRDIAVRIPRLGA 230 Query: 241 SLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 F+AA D + + + L + LV +P+ WH+R Sbjct: 231 IPFLAAFSDFV-VTIPEDLGLLFRDLIPIKLVPVPISLP-------SFQVKQYWHERLHA 282 Query: 301 NPKIVWLRETIKNLYASM 318 + WLR I + + Sbjct: 283 DSAHKWLRTLILQIMKQL 300 >UniRef50_A0RKW5 Transcriptional regulator, LysR family n=81 Tax=Bacillus RepID=A0RKW5_BACAH Length = 306 Score = 229 bits (585), Expect = 1e-58, Method: Composition-based stats. Identities = 41/312 (13%), Positives = 99/312 (31%), Gaps = 21/312 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +++++L +++++ ++AA+ +N++ VS + L F L SP + T Sbjct: 10 MNVDILKIFVTVVEQKHFSRAAELLNLSQPGVSMHIRNLENEFGTTLIQRSPKHVQVTEA 69 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTP-RGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + + + + K + + A + +L + P Sbjct: 70 GNILYIHAKQMLSLYEDAKQKINELHNVVTGTLRIGASFTIGEYLLPKILANYANENPHV 129 Query: 127 TIK-LRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + + D L ++ ++DIG + + +D E D + + Sbjct: 130 EVHTFISNTEDVLQSLRSNQIDIGLVEGQV----------VYADVDVETFMQDEMKLVVP 179 Query: 186 KDHPALHQ-TWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 +HP L N T + D + + + + + Sbjct: 180 PNHPLLRTNEMNESTLQDQVWVLRESGSGTRAYSDRFIHQHHLKMKRFFTFSSIQSVKEA 239 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 + L +A + L+A L E ++L PF+++ K + I Sbjct: 240 VSA--GLGIAILSDWTVRKE------LLAKELFHVEVPNEQLIRPFSIVRGKYFIPSKAI 291 Query: 305 VWLRETIKNLYA 316 + + Sbjct: 292 QVFLNHVNSFAK 303 >UniRef50_B7JB31 Rubisco operon transcriptional regulator n=5 Tax=Acidithiobacillus RepID=B7JB31_ACIF2 Length = 332 Score = 229 bits (585), Expect = 1e-58, Method: Composition-based stats. Identities = 45/317 (14%), Positives = 92/317 (29%), Gaps = 22/317 (6%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 SI L+ L + + S +AA+ +++TP A+S + +L PLF + Sbjct: 25 MSIRHATLHQLKIFAAVARHMSFARAAEELHLTPPALSIQVRQLAEAVGQPLFNQIGKKI 84 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNALSKQIYQ 121 TP ++ + + + ++A S + + Sbjct: 85 YLTPAGEALTSACHDVLDRLEYFTQEIAALQGLEKGSLKVATLST-AKYFIPRIMGGFCT 143 Query: 122 RYPQATIKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 +P L + + L+ + R + D+ G+ + + E + Sbjct: 144 EHPGVATALFIGNREALLERLARNQDDLYILGQPPE----------HINVVAEAFADNPL 193 Query: 181 CVWLRKDHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFE 239 V R DHP + P I A + ++ G M E Sbjct: 194 VVVSRSDHPLASEKDLEPSRLRDAPFILREPGSGTRLAAEKFFEQHGVVLRTRMEFGSNE 253 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 A L +A + L + + LE + ++ Sbjct: 254 AVKQTVAG--GLGIAVLSASTIHAELASG------ELVILDVRGFPLERKWYAVYPAGKL 305 Query: 300 HNPKIVWLRETIKNLYA 316 +P + + + A Sbjct: 306 LSPIVRAFMGCLFAVSA 322 >UniRef50_Q2S713 Transcriptional regulator n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2S713_HAHCH Length = 329 Score = 229 bits (585), Expect = 1e-58, Method: Composition-based stats. Identities = 66/310 (21%), Positives = 136/310 (43%), Gaps = 20/310 (6%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 + +DLNLL+ +M E S++ AA+R+++T AVS ++A++R ++DPLFV + G+ P Sbjct: 1 MRNIDLNLLVIFDAIMTESSISGAAERLSMTQPAVSNAVARMRQVWNDPLFVKNGRGIQP 60 Query: 65 TPLMVSMEQNLAEWMQMSNLLLDKP-HHQTPRGLKFELAAESPLMMIMLNALSKQIYQRY 123 T +S+ ++ + ++ + +F + ++ + + + Sbjct: 61 TTHALSLWHQVSGPLIQLKDAVNPQDFDPSTTRRRFRVGMSDITTDLIWLPMRRMVETEA 120 Query: 124 PQATIKLRNWDYDSLDA-ITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCV 182 P + + ++ ++ +T GEVD+ ++ + + LF Sbjct: 121 PNIDLHAVPANGNNSESILTNGEVDLIVG----------VMQEFRTSFRNDFLFESDYVC 170 Query: 183 WLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 +RKDHP + L+ +L+ H+ + T +D L + G R +AM++ F Sbjct: 171 AMRKDHPLAAEPLTLEKYLKADHLLVSLTGEATGFVDITLSQQGLSRRVAMTVNHFASVP 230 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 + D + + + L + PL + P +++WH R+ +P Sbjct: 231 ALLEGSDLISI-VPNMVIAKGAKCGSLHVTKPPLEIRPT-------PVSMIWHARHDRDP 282 Query: 303 KIVWLRETIK 312 ++WLRE IK Sbjct: 283 GVLWLREKIK 292 >UniRef50_B6AZI7 Transcriptional regulator, LysR family n=1 Tax=Rhodobacterales bacterium HTCC2083 RepID=B6AZI7_9RHOB Length = 301 Score = 229 bits (585), Expect = 1e-58, Method: Composition-based stats. Identities = 40/313 (12%), Positives = 92/313 (29%), Gaps = 26/313 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +DL C + +E +AAKR+ V A+S+++ + L S + T + Sbjct: 3 IDLRHFRCFVAVAEELHFHRAAKRLGVAQPALSRTIKTMENELGVTLLERSNRRVELTHV 62 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + ++ S +++ + M L +L K + P Sbjct: 63 GEIFLTGCRKCLEHSERIIEDMQRVQQGSIGTLRIGYTENAMNGQLPSLLKAFKGQTPDI 122 Query: 127 TIKL-RNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 ++ L + + + + G +D+GF+ + + + S+ + Sbjct: 123 SLVLTHSVTSEQVSQLEDGSIDLGFATG----------NLAKTGFESIRIQSERFVCVVY 172 Query: 186 KDHPAL-HQTWNLDTFLRYPHI--SICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 HP + L P + + Q L+ + + G E IA Sbjct: 173 DSHPFATRSSICLSELAEEPMVQGARAHWQHYYSRLEPLFRTAGFEPKIAQEGLTTTDIQ 232 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 + A + +A + + L + + +W + Sbjct: 233 RLVAC--GIGIAILTETV--------VDCLPSGLAVLPIEDVTDCLDTIAVWPA-KQNTV 281 Query: 303 KIVWLRETIKNLY 315 ++ Sbjct: 282 AKDRFVSFLRQSL 294 >UniRef50_P0ACR7 Uncharacterized HTH-type transcriptional regulator yfeR n=158 Tax=Proteobacteria RepID=YFER_ECOLI Length = 308 Score = 229 bits (585), Expect = 1e-58, Method: Composition-based stats. Identities = 47/315 (14%), Positives = 98/315 (31%), Gaps = 23/315 (7%) Query: 7 TLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTP 66 L L + QE+S ++A +RI ++ SAVS S+ +L L + + T Sbjct: 2 NYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTD 61 Query: 67 LMVSMEQNLAEWMQMSNLLLDKPHHQ-TPRGLKFELAAESPLMMIMLNALSKQIYQRYPQ 125 + L + N L K +AA + ++ + ++RYP Sbjct: 62 AGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPD 121 Query: 126 ATIKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 L + +++I +G+VD G + E + S+ + Sbjct: 122 IQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVG----------DLQCEAILSEPFFLLC 171 Query: 185 RKDHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 +D + + +D L G + I + Sbjct: 172 HRDSALAVEDYVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFP 231 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 M A + ++ P + L + + +E L+ K S + Sbjct: 232 MVAA--GIGISILPALALPLPEGSPLVVKRI--------TPVVERQLMLVRRKNRSLSTA 281 Query: 304 IVWLRETIKNLYASM 318 L + +++ ++ Sbjct: 282 AEALWDVVRDQGNAL 296 >UniRef50_C8T378 LysR family transcriptional regulator n=1 Tax=Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884 RepID=C8T378_KLEPR Length = 321 Score = 229 bits (585), Expect = 1e-58, Method: Composition-based stats. Identities = 56/310 (18%), Positives = 103/310 (33%), Gaps = 22/310 (7%) Query: 7 TLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTP 66 D N L + LM+ S AA+ I ++ SA+S+ + KL + LF + ++ T Sbjct: 26 NFDFNDLYAFRALMEYGSFRLAAESICLSQSALSRRIEKLETALGNRLFDRTTRRVTLTL 85 Query: 67 LMVSMEQNLAEWMQMSNLLLDKPHHQT-PRGLKFELAAESPLMMIMLNALSKQIYQRYPQ 125 + + + + +L + R +A + + + RYPQ Sbjct: 86 YGQNFAERSEQLLAHVETVLADISQVSKARTGLVTVATVPSAAYYFMPEIIRSFQARYPQ 145 Query: 126 ATIKLRNWD-YDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 I+L + + ++A++ G+ D G +LP +I++ L D Sbjct: 146 VRIRLIDSSVGNVIEAVSSGQADFGLCF----------AKNLPASIEFTPLADDRYVAAC 195 Query: 185 RKDHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 R DHP +T + + +I + + LD L L R L Sbjct: 196 RHDHPLARKTHLSWQAYFEQDYIGLDRVSGNRTLLDRELAHLTPARPSICETRHVTTMLG 255 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 M + +A P + L V L + L+ + Sbjct: 256 MVEA--GIGIAAVPAMSMPAGEHSVLRAVPL-------TDPVVTRTVGLIRLSGRIQSYV 306 Query: 304 IVWLRETIKN 313 L + I Sbjct: 307 AAELEKLIIE 316 >UniRef50_A0QCY6 Transcriptional regulator, LysR family protein n=4 Tax=Corynebacterineae RepID=A0QCY6_MYCA1 Length = 294 Score = 228 bits (584), Expect = 1e-58, Method: Composition-based stats. Identities = 42/296 (14%), Positives = 83/296 (28%), Gaps = 24/296 (8%) Query: 16 LQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSMEQNL 75 L + + VT AA++++V +++ LA+L LF LS ++ Sbjct: 9 FITLAELQHVTAAAEQLHVAQPTLTRMLARLEQRLGVALFDRHGRRLSLNTYGRIFYEHA 68 Query: 76 AEWMQMSNLLLDKPHHQ-TPRGLKFELAAESPLMMIMLNALSKQIYQRYPQATIKLRNWD 134 + P + LA S ++ L + + P+ T L Sbjct: 69 RRAQLELDSARRAIADLADPAVGEIRLAYLSSFGSTVVPRLIARFKESSPRVTFTLEEGA 128 Query: 135 YDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPALHQ 193 +S+ D + G VDIG R+ + + LF V + H Sbjct: 129 AESIADRVRSGGVDIGVVSPRPVERT----------LAWRSLFRQRLGVAVPDGHRFARG 178 Query: 194 -TWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQPDNLL 252 ++ P +++ LD + +A+ P + + A L Sbjct: 179 AAVSMVDLADEPFVTMHPGFGMRRLLDELCAAAQFRPRVALQAPNLTTAASLVAA--GLG 236 Query: 253 LATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWLR 308 ++ P + ++W Sbjct: 237 ISLVP---------IDGSSYPSGVSVKPLADADAYRDVGMIWDSGRPLPRSARDFI 283 >UniRef50_Q2RLB0 Transcriptional regulator, LysR family n=1 Tax=Moorella thermoacetica ATCC 39073 RepID=Q2RLB0_MOOTA Length = 297 Score = 228 bits (584), Expect = 1e-58, Method: Composition-based stats. Identities = 40/310 (12%), Positives = 97/310 (31%), Gaps = 23/310 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +++N L + Q +S+++AA+ ++++ S++S + L D LF + G+ T + Sbjct: 1 MNINHLEAFCTVAQVKSISEAARILHMSQSSLSYQIQLLEKDLDVELFTRTTKGVELTEM 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQAT 127 + + ++Q++ L + + A S + L ++YP A Sbjct: 61 GEIVYEYGQTFLQLAENLRRDLDNWKSGQEHLIVGASSSIGSYALPCTIYSFKEKYPDAN 120 Query: 128 IKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRK 186 +KL + +++ + +DIG + + D + + Sbjct: 121 VKLLVGNREETIQKLLDKTIDIGLIEGPVDQP----------GLATRGVTEDELLLIVPA 170 Query: 187 DHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGR---ERTIAMSLPEFEQSLF 243 ++ L+ R P I + L E G + + L + Sbjct: 171 GWQ-GQESITLEELCRLPLILREEGSGTRQVIARALAEHGLGIANLNVVLELNSNDAIKS 229 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 ++ R + L + + FT+++ Sbjct: 230 AI--TAGHGVSLLSRLATRREIHNG------SLKALQVKGISFRSTFTIVYPAGKPATNL 281 Query: 304 IVWLRETIKN 313 + Sbjct: 282 QKKFFRFLLA 291 >UniRef50_B1J7P4 Transcriptional regulator, LysR family n=5 Tax=Pseudomonas RepID=B1J7P4_PSEPW Length = 314 Score = 228 bits (584), Expect = 2e-58, Method: Composition-based stats. Identities = 73/319 (22%), Positives = 127/319 (39%), Gaps = 20/319 (6%) Query: 1 MKKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPL 60 M + +L L L L L+Q ++++ AA+R+ V+ SA+S+ LA LR FDDPL V Sbjct: 1 MNPTFASLSLAHLRTLDCLLQLKNLSHAAERLGVSQSALSRQLAHLREAFDDPLLVRQGR 60 Query: 61 GLSPTPLMVSMEQNLAEWMQMSNLLLD-KPHHQTPRGLKFELAAESPLMMIMLNALSKQI 119 G + ++ + L + ++ L +F LAA + ML L + Sbjct: 61 GYVLSEYGQALVEPLRQVLEELQALRQPAAFDPARCERRFCLAASDYVAEHMLPLLVAAL 120 Query: 120 YQRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 Q P +I R W + GE+D+ L P + +L D Sbjct: 121 EQEAPGVSIDYRTWQAGQYALLASGEIDLA----------TTLFDESPANLHGRLLGEDR 170 Query: 180 PCVWLRKDHPA-LHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEF 238 +R+DHP + + D +L + H+ I +D L+ G +R I++ +P F Sbjct: 171 AVCLMRRDHPLTACEVLSQDDYLAFKHVRISGGGDKDSFIDRHLRTQGLQRRISLEVPFF 230 Query: 239 EQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRN 298 ++ + L + +LH L L + ++WH+R Sbjct: 231 SATVQVVGNSQALA-TVPEHIARQLCRLHGLAWRPLGFVEHTQ-------RYWVVWHQRL 282 Query: 299 SHNPKIVWLRETIKNLYAS 317 + + WLR + L+ Sbjct: 283 QASAEHRWLRNRVFELWRQ 301 >UniRef50_B5GYU9 LysR-family transcriptional regulator (Fragment) n=11 Tax=Streptomyces RepID=B5GYU9_STRCL Length = 340 Score = 228 bits (584), Expect = 2e-58, Method: Composition-based stats. Identities = 39/289 (13%), Positives = 89/289 (30%), Gaps = 11/289 (3%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++ L L+ + S + AA+ + T AVS+ + L PL + + + T Sbjct: 2 IEARHLRVLRAVATTGSFSAAARALGCTQPAVSQQMKALETSAGTPLLIRTGREMRLTQA 61 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + ++ + + ++ + L + ++ + + +P Sbjct: 62 GEVLVRHASGILAGLTAAEEEVAAIAGLRAGRVRLVSFPSGSSTLVPSALAALRAAHPGT 121 Query: 127 TIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + L S++ + G+ D+ + R + + L SD + Sbjct: 122 RVSLVEAEPPRSVEMLREGDCDVALAFRYAGAEREAEWG----DLVVRPLLSDRLVGLVP 177 Query: 186 KDHPALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 + H T +D P I+ C L V + G I + ++ + + Sbjct: 178 EGHRLAGADTVTIDDLADEPWIAGCPRC--RRQLVEVCESAGFAPRIDFATDDYPTVIGL 235 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLL 293 L +A P + VA+ P + + Sbjct: 236 V--GAGLGVAVLPGLALESVRPKGARAVAVEPPVVRKIVALTLPDLSQV 282 >UniRef50_B6IX78 Hydrogen peroxide-inducible genes activator n=1 Tax=Rhodospirillum centenum SW RepID=B6IX78_RHOCS Length = 312 Score = 228 bits (584), Expect = 2e-58, Method: Composition-based stats. Identities = 42/313 (13%), Positives = 96/313 (30%), Gaps = 27/313 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L + + + R +A++ +V+ +S L KL PLF + + PT L Sbjct: 1 MNLRDLRYVVAIAEHRHFGRASEACHVSQPTLSGQLRKLEDRLGAPLFERTSKWVVPTAL 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQ-TPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + ++ ++ ++ + P L L ++ + ++ QR+P Sbjct: 61 GQQVVRHARAALEQADAIEALARAARDPLAGPLRLGVIPTLSPYLMPLVLPELRQRHPGL 120 Query: 127 TIKL-RNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 T+ L + + ++ + R E+D + + LF + + Sbjct: 121 TLVLWEDLTANLIERLRRHELDAALIATGTDG----------EDLIGVDLFVEPFLAAVP 170 Query: 186 KDHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERT--IAMSLPEFEQSL 242 HP + + D R + + V G + + + Sbjct: 171 TGHPLAARDWVSEDDLQRADMLVLADGHCLREQALGVC---GAPPPGGDDLRAASLDTLV 227 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 M + P + L L + L+W Sbjct: 228 SMVSA--GYGCTLVPALAAPGLERRGLVLRPVD-------SFGACRTVRLVWRPTFPRQK 278 Query: 303 KIVWLRETIKNLY 315 + L E ++++ Sbjct: 279 ALDALAELVRSVV 291 >UniRef50_B6R1K2 Transcriptional regulator, LysR family n=1 Tax=Pseudovibrio sp. JE062 RepID=B6R1K2_9RHOB Length = 293 Score = 228 bits (584), Expect = 2e-58, Method: Composition-based stats. Identities = 70/311 (22%), Positives = 127/311 (40%), Gaps = 21/311 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +DLNLLL + + ER++T+A+KR+N+T AVS +L +LR F DPLF+ + G+ PT L Sbjct: 1 MDLNLLLVFEAVYSERNLTRASKRLNLTQPAVSNALRRLRDTFQDPLFIRTADGMVPTDL 60 Query: 68 MVSMEQNLAEWMQMSNLLL-DKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + + ++M + F ++ M++L L K++ ++ P Sbjct: 61 AEQLAGRVLDALEMLRSFESRESFDPAGLSRDFRISISDYNGMLVLPRLLKELAEQAPGV 120 Query: 127 TIKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 +I + + ++ G+VD+ + + YE L+SD Sbjct: 121 SITTSQIQRAHVSEHLSTGQVDLVLAP-----------KQDVANLSYEPLYSDDYVGVAS 169 Query: 186 KDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMA 245 + +L+ + + H+ E +D L +LG++R + + + Sbjct: 170 AHYGPEGGQMSLEEYCQREHLLFSLEGYGRSTVDVALSKLGKKRKVVLRSSHVHTIPHVL 229 Query: 246 AQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIV 305 + Y + +L +LP L WH R H+P Sbjct: 230 EGSAFIA-TLPRLITLDYLKRFELTSFSLPFELKGH-------EVGLHWHARQHHDPAHE 281 Query: 306 WLRETIKNLYA 316 WLR IK L+A Sbjct: 282 WLRGLIKELFA 292 >UniRef50_A6WDF3 Transcriptional regulator, LysR family n=1 Tax=Kineococcus radiotolerans SRS30216 RepID=A6WDF3_KINRD Length = 306 Score = 228 bits (584), Expect = 2e-58, Method: Composition-based stats. Identities = 57/306 (18%), Positives = 108/306 (35%), Gaps = 22/306 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +DL + + L ER T+AA V+ S +S ++ L LF SP + PT Sbjct: 1 MDLRQMQYVVALADERQFTRAAALSGVSQSGLSAAIRTLEDELGATLFDRSPRRVEPTDA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDK-PHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 +++ + + D + AE L ++ ++ L ++ ++R+PQ Sbjct: 61 GLALLPFARTLLAQATAARDAVVQATRRLSGTLRVGAEQCLGVVDVSTLLERFHRRFPQV 120 Query: 127 TIKLRN-WDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 I +D L + GE+D+ F H + + L + + Sbjct: 121 EIHFEQAGSHDLLGRLREGELDLVFVATTEHLGA----------LPASELGREPLVLLTP 170 Query: 186 KDHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 +HP + +P I D G R + S+ + L + Sbjct: 171 PEHPLAGRPHAPWAELAAHPFIDFVPSWGVRPITDAACAAHGVHRRVRFSVGDVHALLDL 230 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 L +A PR+ Q +L +V +P E +++ +S P++ Sbjct: 231 V--GRGLGIAIVPRHVAAKPQAARLAVVPMPP-------GTPEWVVSVVTSAGSSPAPQL 281 Query: 305 VWLRET 310 + L E Sbjct: 282 LELLEV 287 >UniRef50_C6E9D5 Transcriptional regulator, LysR family n=8 Tax=Desulfuromonadales RepID=C6E9D5_GEOSM Length = 305 Score = 228 bits (583), Expect = 2e-58, Method: Composition-based stats. Identities = 51/315 (16%), Positives = 100/315 (31%), Gaps = 24/315 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L + + S +K A+ +T S VS+ ++ L + F L + G PT Sbjct: 1 MNLKQLEVFIKVAESGSFSKGAEATFITQSTVSQHISALESEFGMKLLDRTGKGALPTEG 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTP-RGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + + ++ + + + +A S M+ A + R+P Sbjct: 61 GKILLERARKLVEYAKEIPVALARFKGIEEAELNIAGSSIPGEYMIPAALPLLISRFPGV 120 Query: 127 TIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 TI L D L + EV+ G G S +D+ L D + Sbjct: 121 TIVLLQGDSRDVLRKLMAEEVEFGVVGGRFEEES----------LDFTPLAKDELVLIAP 170 Query: 186 KDHPALHQ-TWNLDTFLRYPHISICWEQSDTWALDNVLQELGRER---TIAMSLPEFEQS 241 H + + + P + A L+E G + +A+ L E Sbjct: 171 AGHRWAKKSRITKEELMAEPFVLRETGSGTGRATAKALREAGLDPAKLKVAVHLGSNEAV 230 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 + ++ L + +++ F L K + Sbjct: 231 KRAVIA--GIGVSYVSAVSVQRELEQG------SLVQVRVAEVEIKRDFFLATRKGRELS 282 Query: 302 PKIVWLRETIKNLYA 316 P + +E + +YA Sbjct: 283 PAAIAFKEIMIEMYA 297 >UniRef50_C1BAS4 Putative LysR family transcriptional regulator n=2 Tax=Actinomycetales RepID=C1BAS4_RHOOB Length = 299 Score = 228 bits (583), Expect = 2e-58, Method: Composition-based stats. Identities = 40/308 (12%), Positives = 89/308 (28%), Gaps = 25/308 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L + +E + +AA+R+++ A+S+ ++K LF + + T Sbjct: 1 MELRQLRYFVTVAEEMNFRRAAERLHIAQPALSQQISKFEKELRTTLFERTTRRVELTDA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQT-PRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + ++ L + S + ++ A + + +P Sbjct: 61 GRVLLDEGRRVLAEADHALAAVEQVAHGEVGLLRIGFVSSAALRIVPATVLALQKEWPGV 120 Query: 127 TIKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 ++L D L AI G +DIG I L + V + Sbjct: 121 QVELSESTTDRQLSAIADGILDIGLVREVDRAE----------GIVVRPLTREPLLVAMH 170 Query: 186 KDHPALHQ-TWNLDTFLRYPHISICWE--QSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 HP + + L ++ + + G A +F L Sbjct: 171 SSHPFAGRASVRLVELRDERFLTFPRGQVSRLYDHIAALCHHAGFRLEAAQEAVQFPTLL 230 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 + A + P + + L + + ++ + P Sbjct: 231 GLVAANTG--VTVVPASLRALHL--------PDLRYVALSDAQAVSTVSVAYRADRQQIP 280 Query: 303 KIVWLRET 310 I + Sbjct: 281 AIRHFLDV 288 >UniRef50_D1RNC3 Transcriptional regulatory protein n=1 Tax=Serratia odorifera 4Rx13 RepID=D1RNC3_SEROD Length = 310 Score = 228 bits (583), Expect = 2e-58, Method: Composition-based stats. Identities = 40/315 (12%), Positives = 82/315 (26%), Gaps = 25/315 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L + +E S +AA+R+++ ++ ++ K+ PL T Sbjct: 2 IELRQLRQFIAVAEEMSFHRAAERLHMAQPPLTAAIRKIEQELGVPLLERGNRITRITEA 61 Query: 68 MVSMEQNLAEWMQMSNLLL-DKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + L + L + +L + +Q +P A Sbjct: 62 GQVFLIEARRTLAQFERTLGNTRRAARGLTESLRLTFVDSTVNALLPGILRQFRLEHPLA 121 Query: 127 TIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 L+ + L A+ DIG + + + D + L Sbjct: 122 EFHLQEATTAEQLIALRDDRADIGMVVLPV---------APQEGLQIQPFLFDRMVLALP 172 Query: 186 KDHPA-LHQTWNLDTFLRYPHISICW--EQSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 HP + L P + A+ G I + + Sbjct: 173 DHHPLAAQRQVTLRDLDDEPWLLFPAHYGPGMHAAILQACAVAGFSPRIVQEARQMQTIG 232 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 + A + +A P + + L + L W + +P Sbjct: 233 GLVAG--GVGIALMPALFAVL-KSPGVVFREL-----SGVGSPVPYTLALAW---QTPSP 281 Query: 303 KIVWLRETIKNLYAS 317 A+ Sbjct: 282 LTDAFCRIAAEQAAA 296 >UniRef50_B4T1W6 LysR family regulatory protein n=58 Tax=Enterobacteriaceae RepID=B4T1W6_SALNS Length = 295 Score = 228 bits (583), Expect = 2e-58, Method: Composition-based stats. Identities = 44/307 (14%), Positives = 99/307 (32%), Gaps = 23/307 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +D+ L +++++S T+AA+++ VT +SK L L + L + L T Sbjct: 1 MDIRTLRYFVEVVRQQSFTRAAEKLFVTQPTISKMLKNLEDELNCTLLIRDGRKLLLTDT 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + + L + L + M ++ QRYP Sbjct: 61 GRVVFERGLAILAEFRQLEAELSDINHLNKGVLRLGIPPMVGM-LMAGPISLFRQRYPGV 119 Query: 127 TIKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 +K+ + ++ A+ GE+D+ + S + LFS CV + Sbjct: 120 ELKISEFGGLTVQQAVMNGELDVAMTALPVEEAS---------GLTTLSLFSHPLCVLVP 170 Query: 186 KDHPALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 + + + +P + + + + L + + + IA+ +++ M Sbjct: 171 RSGQWTTCDSIAPEALAEHPLLIYNEDFALSRQLMTLFSQHDVKPRIAVRSGQWDFLAAM 230 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 + +A P L + L + L ++W + + Sbjct: 231 VQA--GVGIAILPEPICQRLDKATLRWLPL--------ESDLRWQLGMIWREGVYLSHSA 280 Query: 305 VWLRETI 311 Sbjct: 281 RAWLTCC 287 >UniRef50_Q127N6 Transcriptional regulator, LysR family n=1 Tax=Polaromonas sp. JS666 RepID=Q127N6_POLSJ Length = 328 Score = 228 bits (583), Expect = 2e-58, Method: Composition-based stats. Identities = 50/312 (16%), Positives = 91/312 (29%), Gaps = 22/312 (7%) Query: 7 TLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTP 66 + L L + + S T+AA +++T SA+S + +L + S + + Sbjct: 2 NVTLRQLRAFVAVAKSASFTEAAATLHITQSALSGLIKELEHVLGVQVVYRSTRKVQLSE 61 Query: 67 LMVSMEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQIYQRYPQ 125 + +Q + H +AA + ++ +YP Sbjct: 62 VGGEFLPLATRILQDLDEAYHAIHDLKALKSGVVRVAAPQLMACTLMPDAIAAFNSKYPA 121 Query: 126 ATIKLRNWDYDSLD-AITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 I+L + +++ + GEVD + I LF Sbjct: 122 VQIRLSDCAVEAVQSKVHSGEVDFAIGPE----------REVSPEIATHSLFEIPFVAVF 171 Query: 185 RKDHPALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 DHP + RYP IS+ E + + D + M + +L Sbjct: 172 PPDHPLGKLKRVTWTDISRYPLISLQGEYTQRLSADLQAASGNLTLSPGMEVTFMTTALS 231 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 M + + Y L+ L Q L F LL K +P Sbjct: 232 MVSAGLGVTTCLP--YATSLLNLYGLQTR-------LLQAPTLRRKFYLLTKKDRPLSPA 282 Query: 304 IVWLRETIKNLY 315 + + Sbjct: 283 AQGFSDFLLAYV 294 >UniRef50_A3UQR4 Transcriptional regulator, LysR family n=1 Tax=Vibrio splendidus 12B01 RepID=A3UQR4_VIBSP Length = 301 Score = 228 bits (583), Expect = 2e-58, Method: Composition-based stats. Identities = 40/291 (13%), Positives = 92/291 (31%), Gaps = 19/291 (6%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 S+ ++ L L +E + +AA+++N+ A+S+SL KL + LF+ + + Sbjct: 1 MSL-NYEIRHLKHFFALAEELNFRRAAEKLNIAQPALSRSLQKLESDLGVILFIRTTRLV 59 Query: 63 SPTPLMVSMEQNLAEW-MQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQ 121 T + + + + + + + + + L L K Sbjct: 60 ELTDAGKAFHAGAHQAFLSLIDAEKSAMRVKIGEEGSLRIGYTNFAITGQLPQLLKAFKD 119 Query: 122 RYPQATIKL-RNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 YP ++L + D ++++ + +D GF + I D Sbjct: 120 SYPLIRLELIHQFSADQIESLEKERLDFGFITGP----------LIYKGISSFPFQQDPL 169 Query: 181 CVWLRKDHPALHQT-WNLDTFLRYPHISICWEQSDT--WALDNVLQELGRERTIAMSLPE 237 + HP H+ +L I + V + G I + Sbjct: 170 VAIVPDSHPLSHKPSIDLIDLRHESFILGNANNWTHFFKIIQRVCRNAGFMPNIVEEAYD 229 Query: 238 FEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEV 288 E L + ++ + Y + + ++ + D + + Sbjct: 230 TEAILGLV--SSGFGISLHAGTVKNYYRK-GVKIIDINDHLDTISTELITF 277 >UniRef50_C6IVL6 Transcriptional regulator YwqM n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6IVL6_9BACL Length = 302 Score = 228 bits (583), Expect = 2e-58, Method: Composition-based stats. Identities = 48/312 (15%), Positives = 94/312 (30%), Gaps = 19/312 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++ L ++++ S T+AA++++ S+V+ + L A PLF + T Sbjct: 1 MESRHLFTFLVVVEAGSFTRAAQQLDYAQSSVTAQIQALEAEIGLPLFDRIGRKIVLTDA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQAT 127 + E ++ + + H ++ A L L + + QRYP Sbjct: 61 GRRLLPYAQEIAKIHEMAKNALHPAAEMAGSLKIGAPESLAAFRLPEVIRHYRQRYPLVQ 120 Query: 128 IKLRNWD-YDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRK 186 I L+ ++ D + GE+D+ F + + E L + + Sbjct: 121 IVLKPGQCWELRDLVRSGELDVAFLLQPEVE---------DRDLQIETLVHEPMALVAPA 171 Query: 187 DHPALHQ-TWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMA 245 DHP H+ D + S + L G + E Sbjct: 172 DHPLRHEAEVVPDQLKDQTILHTESGCSYRTLFERYLNSHGVFPDPNLEFWSIEAIKQCV 231 Query: 246 AQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIV 305 L ++ P L + V L H++ +P + Sbjct: 232 MS--GLGVSFLPLVTVRSELAEG------KLVKLNWNDESQRVATQLALHRKKWRSPALE 283 Query: 306 WLRETIKNLYAS 317 I+ Sbjct: 284 QFVLMIREQAER 295 >UniRef50_B1K332 Transcriptional regulator, LysR family n=6 Tax=Burkholderia RepID=B1K332_BURCC Length = 302 Score = 228 bits (583), Expect = 2e-58, Method: Composition-based stats. Identities = 44/311 (14%), Positives = 92/311 (29%), Gaps = 25/311 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L + E T+AA R+++ +S+ + +L LFV P G T Sbjct: 1 MELRQLRYFLAVADEGQFTRAAARLHIQQPPLSQQIQELEHELGFALFVRQPRGAVLTAP 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIML-NALSKQIYQRYPQ 125 + N + +A S L + YP Sbjct: 61 GEIFAARARTVLLELNNAVVHARRVAQGRIGTVRVALTSSAAFHPLTPTAIRNFRDMYPG 120 Query: 126 ATIKLRNWD-YDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 +I++ + + ++ + G D + + + +E+L + + L Sbjct: 121 ISIEMSEVNAAEIIEMMLNGRADAAILRKPVETSA---------DLRFELLAEERMLLVL 171 Query: 185 RKDHPAL-HQTWNLDTFLRYPHISICWEQ--SDTWALDNVLQELGRERTIAMSLPEFEQS 241 H + ++ +L I + Q G E + +P + Sbjct: 172 PVGHRLIGGRSVSLKQLANESFIFVRRPGAPGMYADFIRACQAKGFEPHVVEEVPRMVTA 231 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 + + A ++ P Q Y + + + + P L+ N Sbjct: 232 INLVAAGGG--VSLVPASMQRY-RQESVRYCRV------AGDHAFRAPLHLVTRHD-LQN 281 Query: 302 PKIVWLRETIK 312 P RE + Sbjct: 282 PAASHFREALL 292 >UniRef50_A0AYH9 Transcriptional regulator, LysR family n=148 Tax=Proteobacteria RepID=A0AYH9_BURCH Length = 326 Score = 228 bits (583), Expect = 2e-58, Method: Composition-based stats. Identities = 39/260 (15%), Positives = 84/260 (32%), Gaps = 17/260 (6%) Query: 6 TTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPT 65 + ++L L + +ER+ T+AA+R+++ +S+ + +L PLF + L T Sbjct: 20 SNMELRHLRYFVAVAEERNFTRAAERLHIAQPPLSRQIQQLEEALGVPLFERTARPLKLT 79 Query: 66 PLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQ 125 + + + + L + + ML + ++ YP Sbjct: 80 DAGRFFYSHAVQLLAQTTELESMTKRVGKIERSMSVGFVGSTLYGMLPKIIRRFRSEYPA 139 Query: 126 ATIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 + L D + A+ G +D+GF + ++ VL + V L Sbjct: 140 VELSLHEMSTMDQIKALKEGRIDVGFGR----------IRHEDPSVRRVVLREERMIVAL 189 Query: 185 RKDHPA--LHQTWNLDTFLRYPHISIC--WEQSDTWALDNVLQELGRERTIAMSLPEFEQ 240 H +L + I S + + + E + Sbjct: 190 PVGHVLDSAKPVLSLHDLVNDTLIIFPKAPRPSYADQVLAAFHDRALQPRRIYETRELQI 249 Query: 241 SLFMAAQPDNLLLATAPRYC 260 +L + A ++ P+ Sbjct: 250 ALGLVA--MGEGVSVVPQSV 267 >UniRef50_Q46S95 Transcriptional regulator, LysR family n=2 Tax=Burkholderiaceae RepID=Q46S95_RALEJ Length = 309 Score = 228 bits (582), Expect = 2e-58, Method: Composition-based stats. Identities = 46/314 (14%), Positives = 98/314 (31%), Gaps = 25/314 (7%) Query: 9 DLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLM 68 DLN L C + +E +AA R+ +T S +S+ + L LF + + T Sbjct: 4 DLNQLRCFIAVGEELHFGRAATRLFMTQSPLSRQIRMLEESLGVRLFDRNSRVVRLTAAG 63 Query: 69 VSMEQNLAEWMQMSNLLLDKPHHQT-PRGLKFELAAESPLMMIMLNALSKQIYQRYPQAT 127 ++ + + ++ +D K + + ++ L + Q P+ Sbjct: 64 SALLDDARRLLALAGHAVDVARRIDKGVSGKVRVGFTAVAGYELVPNLIARAMQELPEIE 123 Query: 128 IKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRK 186 + L ++A+ G +D+GF + + + S+ + + Sbjct: 124 VTLHEMVTVAQIEALQAGTIDLGFLRPLPD---------VDPELQWRPAVSEPLLLAMHA 174 Query: 187 DHPA-LHQTWNLDTFLRYPHISICWEQS--DTWALDNVLQELGRERTIAMSLPEFEQSLF 243 H + + I + + +VL GR + + + L Sbjct: 175 THALAARERIAAEDLAGQTFIQYSATEGKYFHDLIGSVLAGAGRPPRVVQQMSQTHSVLA 234 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 + L LA P ++ L + + + L+W + NP Sbjct: 235 LVRA--GLGLALVPASARH--------LHFPGVVLRPIWRDDVRAELRLVWR-DANRNPA 283 Query: 304 IVWLRETIKNLYAS 317 + AS Sbjct: 284 CRVFADFAAMHLAS 297 >UniRef50_B1K9P6 Transcriptional regulator, LysR family n=22 Tax=Proteobacteria RepID=B1K9P6_BURCC Length = 306 Score = 228 bits (582), Expect = 2e-58, Method: Composition-based stats. Identities = 43/320 (13%), Positives = 91/320 (28%), Gaps = 28/320 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +DL + + S +AA+R+++ +S ++ KL L G TP Sbjct: 2 IDLRQFRQFIAVAETLSFRRAAERLHMAQPPLSTAIRKLEDELGVALLERDNRGSRLTPA 61 Query: 68 MVSMEQNLAEWMQMSN-LLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + ++ + + G L + +L + + +R+P Sbjct: 62 GEAFLLEARRALEQAERAVAVARRAGAGLGGTLRLRFVDSTVNALLPLILRAFQERHPNV 121 Query: 127 TIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 +L D + A+ + D G + E L D L Sbjct: 122 DFQLEEGTTADQVLALRQDRTDAGLVVLPVADAG---------DVHVEPLLRDRMVAALP 172 Query: 186 KDHPALHQT----WNLDTFLRYPHISI--CWEQSDTWALDNVLQELGRERTIAMSLPEFE 239 H H+ L P + + + G + + + Sbjct: 173 DGHRLAHRRRIALAELAELADEPWVMFAAHHGPGMHALIVTACAQAGVAPRVVQQPRQMQ 232 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 + + A + +A PR + + + L L + + Sbjct: 233 TTAGLVAG--GIGVALMPRLFVPMHPQG------ITFCELKDAGSPLAYELALAYR---T 281 Query: 300 HNPKIVWLRETIKNLYASMA 319 +P + LRE+ +N + Sbjct: 282 PSPLVDALRESARNAVRELG 301 >UniRef50_B4ETB5 LysR-family transcriptional regulator n=7 Tax=Enterobacteriaceae RepID=B4ETB5_PROMH Length = 297 Score = 228 bits (582), Expect = 2e-58, Method: Composition-based stats. Identities = 35/302 (11%), Positives = 90/302 (29%), Gaps = 22/302 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +D+ +L ++Q ++AA + +T A+S+S+ KL L + G+ T Sbjct: 1 MDIRVLRYFIEVVQLNGFSRAADALFITQPAISRSIKKLEDELGTVLLIREVDGVKLTDD 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQT-PRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + ++ + + N + + + P + + + R+P Sbjct: 61 GAILYEHAKQILAQFNSMNKALNDKDEPLTGALNVGLPPVIASTYFADIIMAFSSRHPNV 120 Query: 127 TIKLRNWDYDSLD-AITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 +K+ ++ A+ G V + +L + + D + + Sbjct: 121 ELKIFELGTKQMEDAMLEGTV----------ETAAVMLPFNDKDFELTIFSEDHLMLLVA 170 Query: 186 KDHPALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 + HP + N + I + + + E I + + M Sbjct: 171 QSHPLAKDKKVNFKQLITERFIFFSEDFRINDLVRSACGIYNTEPQIVGRSNHLDLIIAM 230 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 + + P + L ++ +L L ++ + + Sbjct: 231 VKA--GVGITLLPNSMCNKYPIDDLVVIP-------ITSPRLSYQLALATNQNSYQSRSC 281 Query: 305 VW 306 Sbjct: 282 QA 283 >UniRef50_C3BJ72 YwqM (Probable transcriptional regulator YwqM) n=4 Tax=Bacillus RepID=C3BJ72_9BACI Length = 298 Score = 228 bits (582), Expect = 2e-58, Method: Composition-based stats. Identities = 50/311 (16%), Positives = 94/311 (30%), Gaps = 23/311 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L ++ + T+A +++ T S ++ + L +PLF + T + Sbjct: 1 MELRHLKTFIIVAESGGFTRAGEQLGYTQSTITNHIRSLEEEIGNPLFDRLGKKVILTDV 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQAT 127 M + +++SN L+ + A LM+ L A+ + ++YPQ Sbjct: 61 GEHMLSYAHKILELSNEALESSQMNGKFSGTIRIGANESLMIYRLPAVLYEFKRKYPQVH 120 Query: 128 IKLRNWDYDSLD-AITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRK 186 I L+ + L + G+ D L I L + + Sbjct: 121 IILQPSESQELHNELKSGKFDFALFTHPE---------QLGTDIVTHSLVQEKIVLIAPP 171 Query: 187 DHPALHQ-TWNLDTFLRYPHISICWEQSDTWALDNVLQELGRER-TIAMSLPEFEQSLFM 244 HP + + + + L+ ++E G I E Sbjct: 172 KHPLTKKVSVSPADLEGEMLLLTEPGS-YRDLLERRIKEDGINCSHIHFW--SIEAIKQT 228 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 L ++ P L K V L +HK P + Sbjct: 229 VMC--GLGISYLPFITVKEEIEQG------KLSVLPWTYSKDFVTTELAYHKSKWLTPAM 280 Query: 305 VWLRETIKNLY 315 L E I+ Sbjct: 281 KKLIEMIEKHA 291 >UniRef50_UPI000174499E transcriptional regulatory protein, LysR family n=1 Tax=Verrucomicrobium spinosum DSM 4136 RepID=UPI000174499E Length = 302 Score = 228 bits (582), Expect = 2e-58, Method: Composition-based stats. Identities = 48/319 (15%), Positives = 98/319 (30%), Gaps = 20/319 (6%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 LD L +L +E S T+A + +++T SA+S ++ L LF + Sbjct: 1 MDSPLLDSRQLRAFTVLAREGSFTQAGRALHLTQSAISHAIRALEEDLGCMLFHRQGKRV 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTP-RGLKFELAAESPLMMIMLNALSKQIYQ 121 T + ++ E + L + + + +L + ++ Sbjct: 61 LLTHHGRELLRHAEEIQRQMALARASLGALDQNPRGQIRIGSTPAASQFILPTVLREFKD 120 Query: 122 RYPQATIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 +P +I + D+L + +G +D+ R +D LF D Sbjct: 121 SFPLYSISIVPGETPDTLQRLEQGVLDLAVCLRPRDVA----------RVDCRPLFEDEL 170 Query: 181 CVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQ 240 HP Q +I S + +LG + L E Sbjct: 171 IFLASPLHPWAQQHPKTKDLAGETYIISSRNSSTFEMIGEYFLKLGVRPKSFIELGNTEA 230 Query: 241 SLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 + L +A + LV+LPL + +++ + + K+ Sbjct: 231 IKELVK--LGLGVAMVAAWTAPAEIKSG-ELVSLPL-----VRSRIKRQWVVAHMKQKPV 282 Query: 301 NPKIVWLRETIKNLYASMA 319 + + + +A Sbjct: 283 SLAEQTFMTLCEQVGEQLA 301 >UniRef50_Q0BXT0 Putative oxidative stress regulatory protein OxyR n=1 Tax=Hyphomonas neptunium ATCC 15444 RepID=Q0BXT0_HYPNA Length = 309 Score = 228 bits (582), Expect = 2e-58, Method: Composition-based stats. Identities = 47/321 (14%), Positives = 92/321 (28%), Gaps = 24/321 (7%) Query: 1 MKKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPL 60 M +I L L L L + S ++AA+ +VT +S + +L F L Sbjct: 1 MSMNIP--TLRQLQFLVALGESGSFSRAAEACHVTQPTLSAGIKELEDLFGVALAERESR 58 Query: 61 GLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQI 119 G + T + + ++ L+ F L A + +L + Q+ Sbjct: 59 GATLTHAGEIAVARASALLADAHALVQAVTSAGALFSGPFHLGAIPTIAPFVLPQIVGQL 118 Query: 120 YQRYPQATIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSD 178 +RYP + L + +D + +D F I+ LF D Sbjct: 119 TRRYPDLKLYLTEDRTHRLIDQLRARTLDAAFIALPWEAP----------GIEMMTLFDD 168 Query: 179 VPCVWLRKDHPALHQ-TWNLDTFLRYPHISICWEQSDTWALDNVLQ-ELGRERTIAMSLP 236 + HP + + + + + +V + + G R Sbjct: 169 EFLLAAPAGHPLSRKNGLSPEDLQGEDLLLLEDGHCLRDHAVSVCRLKAGAGREQVA-AT 227 Query: 237 EFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHK 296 + M A L ++ PR + + + W Sbjct: 228 SLGTLVNMVAG--GLGVSLIPRLAADNGLALG-----PDVAVRSFVTPIIGRQVGIAWKS 280 Query: 297 RNSHNPKIVWLRETIKNLYAS 317 + + L E ++ Sbjct: 281 GSPREAEARALGELVREQLRG 301 >UniRef50_A9CLK9 Transcriptional regulator, LysR family n=2 Tax=Alphaproteobacteria RepID=A9CLK9_AGRT5 Length = 325 Score = 228 bits (582), Expect = 2e-58, Method: Composition-based stats. Identities = 82/318 (25%), Positives = 134/318 (42%), Gaps = 22/318 (6%) Query: 2 KKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLG 61 ++ +DLNLL+ L ER+VT+A RI T A+S +L++LR D LFV P G Sbjct: 7 PMNLHGIDLNLLVAFDALNSERNVTRAGSRIGRTQPAMSAALSRLRFLLRDELFVRGPNG 66 Query: 62 LSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGLK--FELAAESPLMMIMLNALSKQI 119 L PTP V + + ++ ++ L P F +A + ++L L + Sbjct: 67 LQPTPRAVELAEPISLALREIQRTLQFTQGFDPDKSTISFSIAVSAHAGSVILPRLLSLL 126 Query: 120 YQRYPQATIKLRNWDY--DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFS 177 ++ P IK+R++ D++ + G VD+ + I LF Sbjct: 127 EEKAPGIDIKVRDYSSRDDAVSLLDSGGVDLTVGIPPTPTS----------RILSARLFQ 176 Query: 178 DVPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPE 237 + LRKDHP L + ++ +TFL HI + + D L R A+++P Sbjct: 177 ERFVCILRKDHPILGRPFDPETFLSLTHILVAPDNEGLDVADAALASKNFRRRAAVTIPH 236 Query: 238 FEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKR 297 + + A D + + +L + PLP + VPF L WH+R Sbjct: 237 MHVAPALVASSDMVA-TVIESVVAHSGFAERLAVFDFPLPLN-------PVPFVLSWHRR 288 Query: 298 NSHNPKIVWLRETIKNLY 315 N +P WLR + + Sbjct: 289 NDGHPAQQWLRNGLLAAF 306 >UniRef50_Q97DV9 Transcriptional regulator, LysR family n=1 Tax=Clostridium acetobutylicum RepID=Q97DV9_CLOAB Length = 312 Score = 228 bits (582), Expect = 2e-58, Method: Composition-based stats. Identities = 40/313 (12%), Positives = 103/313 (32%), Gaps = 24/313 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +D ++ + +E+S+++AA+R+ ++ ++S+ + +L LF + ++ T Sbjct: 1 MDFRQFEYVKTIAEEKSISRAAERLYISQPSLSQYIIRLENSLGVKLFDRTSATITLTFA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + ++N L + + + + S +L + + Y+ YP Sbjct: 61 GEKYIETARNIINLNNQLTKELNDIANLSKGRVIIGVPSQAGRYILPLVIPKFYKEYPNI 120 Query: 127 TIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 I + + + G++DI I YE + ++ + Sbjct: 121 EIIVEENIVSELEKMLLEGKIDIAILTLPVQ----------HEKITYESIMNERIFLIAP 170 Query: 186 KDHPA--LHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 K HP + + + I + Q +D++ +G + I + + + + Sbjct: 171 KKHPICSVDGRISFNFIRNEKFILLKKGQRIRLIVDDIFSRIGAKPNIILEITNLDAAYR 230 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 M + P Y + ++ LE + + K Sbjct: 231 M--ASSGMGFTIVPENVLYLLNTNG--------KENDFIIDSLEHTLVVAYRKGEYLTRA 280 Query: 304 IVWLRETIKNLYA 316 +K + Sbjct: 281 SREFIANLKGVMK 293 >UniRef50_B4SSK9 Transcriptional regulator, LysR family n=3 Tax=Stenotrophomonas RepID=B4SSK9_STRM5 Length = 302 Score = 228 bits (582), Expect = 3e-58, Method: Composition-based stats. Identities = 55/321 (17%), Positives = 106/321 (33%), Gaps = 31/321 (9%) Query: 7 TLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTP 66 +++L L + +AA+R+ ++ +S+ + +L LFV S + T Sbjct: 2 SIELRHLRYFLAVADTLHFGQAAERLGMSQPPLSQQIRQLEDLIGARLFVRSHRRVQLTA 61 Query: 67 LMVSMEQNLAEWMQMSNLLLDKPHHQ-TPRGLKFELAAE-SPLMMIMLNALSKQIYQRYP 124 +++ + +D+ + + + + + Q QRYP Sbjct: 62 AGELLQERARAIVLQVESAVDEVQRAQRGEQGELRIGLTRATPLSPQIPRSILQYRQRYP 121 Query: 125 QATIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVW 183 Q ++L + +DA+ G +D+G +LP + LF D + Sbjct: 122 QVRLQLSEMNTLQQIDALLDGSLDVGIIR----------KRALPPELVAHSLFVDPLALI 171 Query: 184 LRKDHPALHQ-----TWNLDTFLRYPHISICW--EQSDTWALDNVLQELGRERTIAMSLP 236 + DHPAL + T +L F + P ++ + + G I Sbjct: 172 VHADHPALRRLSKQGTLSLRDFAQEPFVAFRRSAGAGIHDHMIALCAAAGFTPRIVQEAG 231 Query: 237 EFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHK 296 E + L A P C + ++ VAL L WH+ Sbjct: 232 EASTLIS--LAAAGLGAAILPSSCDHI-RVEGARFVAL-------ADAGAHSEVQLAWHR 281 Query: 297 RNSHNPKIVWLRETIKNLYAS 317 P I ++ +A Sbjct: 282 EG-VTPLIRNFAGLLREAFAE 301 >UniRef50_A0QTM3 HTH-type transcriptional regulator AlsR n=7 Tax=Actinomycetales RepID=A0QTM3_MYCS2 Length = 304 Score = 228 bits (582), Expect = 3e-58, Method: Composition-based stats. Identities = 35/289 (12%), Positives = 84/289 (29%), Gaps = 16/289 (5%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L + + +E +AA+R+++ +S+ + +L L + + TP Sbjct: 1 MELRHLRYFRAVGEELHFGRAAERLHMAQPPLSQQIRQLERELGCTLLTRTTRSVELTPA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQT-PRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + E + + + + + +L L + + + P Sbjct: 61 GHTYLRRAVEILDAVDAANTEAQRIASGIQGRIAIGCVGSATYSLLPQLVRALGESLPGI 120 Query: 127 TIKLRN--WDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 + +R ++A+ G +D+ + + D V L Sbjct: 121 EVTVRGEMLAPAQIEALLSGGIDLALLRPPVRQEAVL----------THTVRRDGLVVAL 170 Query: 185 RKDHPAL-HQTWNLDTFLRYPHISI--CWEQSDTWALDNVLQELGRERTIAMSLPEFEQS 241 DH + + + + V + G I + E Sbjct: 171 PADHALAIRDAVTVADLRDEDFVVHTGHGRSVMSNLVATVCADAGFLPRIRQEVSETSTL 230 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPF 290 + + A + + P + +PL L D + P Sbjct: 231 VTLVAAGLGVAIVPDPTTALDIAGVRYVPLRPTDLGVDLVAAHTGDSPL 279 >UniRef50_B4SKP4 Transcriptional regulator, LysR family n=24 Tax=Bacteria RepID=B4SKP4_STRM5 Length = 320 Score = 228 bits (582), Expect = 3e-58, Method: Composition-based stats. Identities = 42/314 (13%), Positives = 89/314 (28%), Gaps = 23/314 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L L L + +AA V+ +S + KL PL +P + TP Sbjct: 1 MNLRDLKYLVALADHKHFGRAAASCFVSQPTLSTQIRKLEEELGLPLVERAPRKVMLTPA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHH-QTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + L + + P L L +L + +I +R+P+ Sbjct: 61 GQEAAARARVIVSEVEQLKEAARRSRDPEAGTVRLGIFPTLGPYLLPHVIPRIRERFPEL 120 Query: 127 TIKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + L D LD + G++D + + E LF + + + Sbjct: 121 ELLLVEEKSDVLLDRLREGKLDAALLALPV----------IDDQLHAEFLFEEPFLLAVS 170 Query: 186 KDHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 HP + ++ + + V + G E M Sbjct: 171 GRHPLARREHLDVQELATQKLLLLEDGHCLRDQALEVCRLFGANEKSEFRATSLETLRQM 230 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 A + + P + L + + ++W + + + Sbjct: 231 VAAD--VGITLLPSLSVQPPVPRSSNIRLLDFT----GEGRPSRRIAMIWRR----SSAM 280 Query: 305 VWLRETIKNLYASM 318 + + + + Sbjct: 281 NDFLTELADQFKRL 294 >UniRef50_A1W2B9 Transcriptional regulator, LysR family n=6 Tax=Comamonadaceae RepID=A1W2B9_ACISJ Length = 308 Score = 228 bits (582), Expect = 3e-58, Method: Composition-based stats. Identities = 44/315 (13%), Positives = 96/315 (30%), Gaps = 23/315 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L + + +T++A + VT S +S L +L A PLF GL + Sbjct: 1 MELRQLRYFLSVAETEHLTRSADVLFVTQSTLSHGLRQLEAELGVPLFDRLGRGLRLSQA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + A +Q + ++ + + RYP Sbjct: 61 GHAFRDHAARALQELEARRQAVADMSALQTGTLQVGVIPTFLTRFVPDAVAAFSARYPGV 120 Query: 127 TIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + +R+ + + G +D+G + + I+ E LF + + + Sbjct: 121 QLTVRDLRSGQIEELLIAGRLDLGIAFHPASR----------EEIEAEPLFEERMHLVVH 170 Query: 186 KDHPALHQ-TWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 + HP + L P + + +D + G + + + + L Sbjct: 171 QGHPLARRQRLRLAELAGVPLALLPASFATRRLIDAAFAQAGVTPLVRVEMESVDALLQA 230 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 +A ++ + A + + LLW + S + Sbjct: 231 CRSGPLATIA-----AEHAALHAGPDMRA-----AVLTEPRTVRRAGLLWRRGASRSAAA 280 Query: 305 VWLRETIKNLYASMA 319 ++ A A Sbjct: 281 REFVALLRPAIARTA 295 >UniRef50_A6VSP2 Transcriptional regulator, LysR family n=1 Tax=Marinomonas sp. MWYL1 RepID=A6VSP2_MARMS Length = 296 Score = 227 bits (581), Expect = 3e-58, Method: Composition-based stats. Identities = 43/313 (13%), Positives = 94/313 (30%), Gaps = 24/313 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 + L + +E +AA R+++ +S+ + + LF S +S TP Sbjct: 1 MRFRKLNYFITVAEELHFGRAAARLHIAQPPLSQQIKAIEDEIGAVLFERSSQKVSLTPA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQT-PRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 ++ +Q + ++ L + Q Q Sbjct: 61 GEALLPQARALLQDWEKIQEQVRSIANGTSGNLSLGFVWAAGTPHFSKGIAQFKQDNHGV 120 Query: 127 TIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 T+ L +LDA+ ++D+ ++++ + + L Sbjct: 121 TLNLEEMTTTHALDALRTKKIDLAMIFLNPLMDIT--------DLEHQDYETQKHLLALP 172 Query: 186 KDHPALHQ-TWNLDTFLRYPHI--SICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 ++HP + + L + P I S + + L G E I + + Sbjct: 173 ENHPLAQKESVPLSDLHQLPFISFVRQAHPSLYDQIMHHLHAAGVEPNIVQIARLTQTTR 232 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 + A + +A P +++ L + E +W K N P Sbjct: 233 TLVAA--GVGVALVPES-TQFDRREGLTYRPIDGVLPEL-------DIHFVWRK-NGLTP 281 Query: 303 KIVWLRETIKNLY 315 + L ++ Sbjct: 282 LMERLIAHLQEQV 294 >UniRef50_A0LD88 Transcriptional regulator, LysR family n=1 Tax=Magnetococcus sp. MC-1 RepID=A0LD88_MAGSM Length = 312 Score = 227 bits (581), Expect = 3e-58, Method: Composition-based stats. Identities = 67/312 (21%), Positives = 125/312 (40%), Gaps = 19/312 (6%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 + DLNLL+ LM ER VT+A +R+ +T +A+S +L +LR FDDPLF+ + + P Sbjct: 9 LNKFDLNLLVAFDALMSERGVTRAGRRLGITQAAMSNTLRRLRTAFDDPLFIKTGARMEP 68 Query: 65 TPLMVSMEQNLAEWMQMSNLLLD-KPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRY 123 TP + + + ++ ++ LD F + + ++ AL + + Sbjct: 69 TPRAMELSGMIEAALKQVHVALDNDSFDPANSHYVFRVGMVDYTVPLVFPALLDHLEKYA 128 Query: 124 PQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVW 183 P +++ N + + GEVD+ S + P + V+ Sbjct: 129 PNCILEVVNTGDFEGEMLESGEVDLVLSRLD----------QAPRGLKSRVVGEIPFVCI 178 Query: 184 LRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 R HP + + L+ +L+ H+ +D L+ + +ER + + L F Sbjct: 179 YRPGHPLIKEPMTLEQYLQARHVHYYPPMVKEGLVDLGLKAINQERNVVVRLDSFGMVPT 238 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 + A+ D + A L + LP F ++WH R+ + Sbjct: 239 LVAETDLIA-AVTHTSAHVIAPAMGLKVQPLPFEAPPL-------QFVMVWHDRSEESAP 290 Query: 304 IVWLRETIKNLY 315 W RE + ++ Sbjct: 291 HQWFREQVLHML 302 >UniRef50_UPI0001C3125C transcriptional regulator, LysR family n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C3125C Length = 315 Score = 227 bits (581), Expect = 3e-58, Method: Composition-based stats. Identities = 37/316 (11%), Positives = 93/316 (29%), Gaps = 19/316 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +D+ L L+ + S + AA + +T SAVS+ +A L L + T Sbjct: 2 IDVRRLRVLREVAVHGSFSAAAHALTLTQSAVSQHVATLEREVGQRLVERGTRPVELTEA 61 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNALSKQIYQRYPQA 126 ++ ++ + + R + + ++ ++ + +P Sbjct: 62 GYALTRHATGIFARLDDAEQELAEIAGRRHGRLRFGTFPTALATLMPPAFERFGRTHPDV 121 Query: 127 TIKLRNWD-YDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 T+ + + + + GE+D+ ++ L D L Sbjct: 122 TLTVVDDHLQRLVPRLETGELDLALIYDHEALPEISA-----RDLERMPLADDPFQAVLP 176 Query: 186 KDHPAL--HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 H + L P I + + + G +++ ++ Sbjct: 177 AGHRLARRRRPLELSDLSGEPWIGGSPNSAWYRITAHACRLAGFTPHASLASDDYIAVQA 236 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 + A L ++ P + + + + + H P Sbjct: 237 LVAA--GLGVSLIPGLAVAHPLPG--------VEVRKLASGAPVRRISAARPRDGYHGPP 286 Query: 304 IVWLRETIKNLYASMA 319 + + E+++ A +A Sbjct: 287 VAAMLESLRAAAAQVA 302 >UniRef50_C3BCJ4 Transcriptional regulator LysR n=1 Tax=Bacillus mycoides Rock3-17 RepID=C3BCJ4_BACMY Length = 298 Score = 227 bits (581), Expect = 3e-58, Method: Composition-based stats. Identities = 41/313 (13%), Positives = 100/313 (31%), Gaps = 20/313 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +DL L+ +++E +T+AA R+++ +S L L L T Sbjct: 1 MDLKKLIYFVTIVEEGQITRAANRLHIAQPPLSMQLKALEEELGVILINRDKKEFELTHS 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKP-HHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + E + + ++ + Q K + + +L L + ++YP Sbjct: 61 GFTFYRRAKEVLDSIDGMITEVKEEQEGLRGKLSIGTVKSCVPYLLP-LLNKFKEKYPDV 119 Query: 127 TIKL-RNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 T +L + + ++++G + + ++S + L S+ Sbjct: 120 TFQLWEEDSQRLEELLLSKKIELGIVRLPLQSQDVKNINS----LSIYPLHSEPLVAIQP 175 Query: 186 KDHP-ALHQTWNLDTFLRYPHISICWEQSDT--WALDNVLQELGRERTIAMSLPEFEQSL 242 KD ++ +P + + + + G I + + Sbjct: 176 KDWDKFESNVVTIEELKNFPLLILHSQGDIYIFHKFVETCKTHGFTPKIICESSDVSTLM 235 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 + + +A P+ + Q L + K++ L+W + + Sbjct: 236 KL--AELGVGIAIVPKVAVHLLQQESLSYFEI--------VPKIKSDTALIWIENKYMSK 285 Query: 303 KIVWLRETIKNLY 315 +E NL+ Sbjct: 286 AAHNFKELATNLF 298 >UniRef50_C6CZP2 Transcriptional regulator, LysR family n=5 Tax=cellular organisms RepID=C6CZP2_PAESJ Length = 300 Score = 227 bits (581), Expect = 4e-58, Method: Composition-based stats. Identities = 49/304 (16%), Positives = 98/304 (32%), Gaps = 22/304 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++++ L L + + S KA + +N+T AVS + L F L + ++ T Sbjct: 1 MNISQLETLLTISKTMSFRKAGELLNLTQPAVSAQIKTLEEEFKTVLIDRN-QPVTLTDH 59 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 ++ + + L K L S + + +L + +YP Sbjct: 60 GKVFLEHAERILAVVEELKQKLSDLNAIPQGHIVLGTTSSMAIQILPRVLSYFQDQYPLI 119 Query: 127 TIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + L ++ G VD+G + +S +D +L+ D + Sbjct: 120 KTTIHTMPSSQVLASVENGSVDMGITY----------ISEKNPNMDSSILYYDSFVLVAS 169 Query: 186 KDHPALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 HP +D YP I + + LD + ++ + I M L E+ M Sbjct: 170 PAHPLSQVAHTTIDMIKDYPFIMLAPDTLGRRFLDQIFKKNNIQPNIIMELSSSEEVKRM 229 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 NL +A + L + + + P +++ N + Sbjct: 230 VE--INLGIAVVSKLSIANELRLG------SLKIIKVTELEPYHPVAVVYKSGRYLNTAM 281 Query: 305 VWLR 308 Sbjct: 282 QQFL 285 >UniRef50_Q12DG5 Transcriptional regulator, LysR family n=1 Tax=Polaromonas sp. JS666 RepID=Q12DG5_POLSJ Length = 289 Score = 227 bits (580), Expect = 4e-58, Method: Composition-based stats. Identities = 42/308 (13%), Positives = 95/308 (30%), Gaps = 26/308 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +DL L + +E S ++AA R++++ +S+ +AKL L + S ++ T Sbjct: 1 MDLRQLSYFVAVAEELSFSRAASRVHISQPPLSRQIAKLEQELGAVLLIRSSHEVALTQA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKP-HHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 ++ + + ++ + + + + + AL Q Q YP Sbjct: 61 GQALLEEARRLLALAAGIPEVVGRASRGETGSLRIGFVGSTIYTSVPALLSQYRQIYPHV 120 Query: 127 TIKLRNWD-YDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + ++ + E+D+G + + LF + L Sbjct: 121 AVSVQQLTVARQTVMLKNSEIDVGIIRQAVTEP----------WLATRSLFKEGFMAALP 170 Query: 186 KDHPALH-QTWNLDTFLRYPHISICWE--QSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 H L + + + L + + G I + Sbjct: 171 VHHRLAGQDRVMLQSLAEDDFVFFSRSEAPAIHEQLRKMCEAAGFSPRIVQEAYPMSTVV 230 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 + A + +A P Q + L + + + + F L WH N+ + Sbjct: 231 GLVAA--GVGIAIVPESMQRLQMQNVL--------YRALRGTRAKTEFFLAWHVGNT-SQ 279 Query: 303 KIVWLRET 310 + + Sbjct: 280 TLRGFLDM 287 >UniRef50_A8GKS5 Transcriptional regulator, LysR family n=1 Tax=Serratia proteamaculans 568 RepID=A8GKS5_SERP5 Length = 314 Score = 227 bits (580), Expect = 4e-58, Method: Composition-based stats. Identities = 69/318 (21%), Positives = 120/318 (37%), Gaps = 20/318 (6%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 ++ +DLNLL+ + ++RSV A + + ++ AVS +LA+LR FDDP+FV + Sbjct: 1 MNLKNVDLNLLVVFDAIFRQRSVGLAGQMLGISQPAVSHALARLRQLFDDPMFVRINNEM 60 Query: 63 SPTPLMVSMEQNLAEWMQMS-NLLLDKP-HHQTPRGLKFELAAESPLMMIMLNALSKQIY 120 PT + ++ + M + +L L L L + Sbjct: 61 RPTDRASELMPSVERVLSMIRDDVLQPVGFDPAANRRTLTLCMPDIGEQYFLPPLINHLA 120 Query: 121 QRYPQATIKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 Q P + L +A+ G VD+ R+ + LF Sbjct: 121 QVAPGMAVVSHELAPAQLEEALESGRVDLAIGYFPDLRRAV---------FYQQRLFYSG 171 Query: 180 PCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFE 239 C +R+ HP + +T +L FL+ H++ + ++E G R + + F Sbjct: 172 FCCAVRQGHPQIGKTLSLPQFLQAEHVTARLRIRSQEIAEQAMREQGIVRNVKLQTSHFL 231 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 + AQ D L Q ++ + +P P + P WH+R Sbjct: 232 SLTQIIAQTDLLA-TVTYEAAQLLQAAGKVHIYPVPFPIP-------QFPVMQYWHERAH 283 Query: 300 HNPKIVWLRETIKNLYAS 317 H+ WLR I+ L+ Sbjct: 284 HDRGNQWLRGEIRGLFQR 301 >UniRef50_Q2S7V2 Transcriptional regulator n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2S7V2_HAHCH Length = 310 Score = 227 bits (580), Expect = 4e-58, Method: Composition-based stats. Identities = 81/318 (25%), Positives = 133/318 (41%), Gaps = 21/318 (6%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 I+ +DLNL + + E +T+A++ +++T AVS +L +LR D LF+ S G+ Sbjct: 1 MHISRIDLNLFVVFDAIYSEGGITRASEVLHLTQPAVSHALNRLRETLGDELFIRSSRGM 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQIY 120 +PTP + + + + L + P F L +++L AL K Sbjct: 61 TPTPYAHQLIGTVRQALNQLQRGLHQGQEFAPAQLETSFRLCVRDLFDVLLLPALIKNCR 120 Query: 121 QRYPQATIK-LRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 P+ LR+ L + G +D+ ++L S +I +E LF D Sbjct: 121 AIAPKVVFNCLRSPREQILHDLASGRIDLA----------ADVLISHDDSICHEKLFEDR 170 Query: 180 PCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFE 239 LR+DHPAL W+L LR+PH+ + + D L G +R + + P F Sbjct: 171 LTCLLRRDHPALASEWSLAEMLRWPHVQVSSREHGPGYEDIQLSRHGLQRKLGLRTPNFY 230 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 + AA D +L A + + Q L ++ PL + L WH+ Sbjct: 231 GAALTAANSDLILCA-PEQVARKLTQTIPLQVMPFPLTLNPL-------ETYLYWHRSTD 282 Query: 300 HNPKIVWLRETIKNLYAS 317 P +WLRE + A Sbjct: 283 REPAHIWLREQTQRALAQ 300 >UniRef50_UPI0001BCF0E5 transcriptional regulator n=1 Tax=Selenomonas noxia ATCC 43541 RepID=UPI0001BCF0E5 Length = 303 Score = 227 bits (580), Expect = 4e-58, Method: Composition-based stats. Identities = 50/315 (15%), Positives = 104/315 (33%), Gaps = 24/315 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L Q++ R T+AA+ ++VT A+S+S++KL D LF S + T Sbjct: 1 MELAQLKYFQVMANIRHFTRAARMLDVTQPALSRSMSKLEKDLDVRLFKRSDGEIELTQE 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQT-PRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + + ++ + + +F+L+ L +L + + YP Sbjct: 61 GARLLRRVDRILREVESAKREASNLQVGSSTEFKLSFIHSLGSYILPHILRDFQAIYPDI 120 Query: 127 TIKL-RNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 I L + + GE D+ L+S+ V + Sbjct: 121 QIHLNQQDSTAMPQVLAAGESDLCLCSALPMTEHSAWAY----------LWSEELFVAVP 170 Query: 186 KDHPALHQ-TWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 HP + + NL I++ S +D G I + + Sbjct: 171 LGHPFADRVSINLHELEYESFIALKNNYSLRILVDQFFDLAGIHPEITFEGGDISTLSGL 230 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 + L ++ P L +P+ F + + W+ + P Sbjct: 231 VSA--GLGISILP----KPTGFEHPELRYIPISFPLCK-----RALGVAWNTQRQLPPAA 279 Query: 305 VWLRETIKNLYASMA 319 V ++ + + ++ Sbjct: 280 VNFQQFLIRRFDDVS 294 >UniRef50_B4SNU6 Transcriptional regulator, LysR family n=1 Tax=Stenotrophomonas maltophilia R551-3 RepID=B4SNU6_STRM5 Length = 310 Score = 227 bits (580), Expect = 5e-58, Method: Composition-based stats. Identities = 45/287 (15%), Positives = 88/287 (30%), Gaps = 18/287 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L + Q +S TKAA+ +++ + + + L PLF G+ + Sbjct: 1 MELRHLRYFVMTAQLQSFTKAAEALHIAQPPLGQQIRALEEEIGTPLFHRQGRGIVLSDA 60 Query: 68 MVSMEQNLAEWMQMSNLL-LDKPHHQTPRGLKFELAAESPLMM-IMLNALSKQIYQRYPQ 125 + + + L + AL ++ Q +P Sbjct: 61 GRVFWAAAVDILARVDHAKEQALSAARGEVGTLTLGLTESASYNDAVTALLRRFRQAHPA 120 Query: 126 ATIKLRN-WDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 ++L + + GE+D S P + + L ++ L Sbjct: 121 VQLQLVEDGSESLIRRLDDGELDAVIVRPP---------YSHPGELVIQQLSAEPLVAVL 171 Query: 185 RKDHPALHQT-WNLDTFLRYPHISICW--EQSDTWALDNVLQELGRERTIAMSLPEFEQS 241 +HP + L I + + + G TI P+ + Sbjct: 172 PAEHPLAGRAGIALTELRDERFILFSRKSGYGLSADVVAACRSQGFTPTIQQEAPQVASA 231 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEV 288 + +AA L +A P Q ++ L VAL L + + Sbjct: 232 INLAAA--GLGIAIVPASMQTLHR-PGLAFVALELGMPITALQLAMR 275 >UniRef50_A0LBV6 Transcriptional regulator, LysR family n=1 Tax=Magnetococcus sp. MC-1 RepID=A0LBV6_MAGSM Length = 324 Score = 227 bits (580), Expect = 5e-58, Method: Composition-based stats. Identities = 36/306 (11%), Positives = 88/306 (28%), Gaps = 21/306 (6%) Query: 7 TLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTP 66 ++LN L + + ++ + ++AAK +V+ ++S ++ L LF + T Sbjct: 6 KMNLNQLRYVMAVARQGTFSRAAKICHVSQPSLSVAVRNLEEELGVVLFERFKHEVRVTT 65 Query: 67 LMVSMEQNLAEWMQMSNLLLDKPH--HQTPRGLKFELAAESPLMMIMLNALSKQIYQRYP 124 + + + ++ + P L A + + + +++Q P Sbjct: 66 EGERILARIQQALEAVAQIELAARSEENDPLKGSLRLGAIFTIAPYLFPSFVPELHQWAP 125 Query: 125 QATIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVW 183 Q T+ L + + RGE+D + L+ + V Sbjct: 126 QLTLLLEENFTASLSEKLKRGELDAMVIALPYDEP----------GVVTTPLYDEPFVVG 175 Query: 184 LRKDHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIA------MSLP 236 + HP + + + + + + + A + Sbjct: 176 MPAGHPWAGRHDLSGNDLAGERLLLLGKGHCFRDQVLEICPACHYVVDTATGLHNIIEGS 235 Query: 237 EFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALP-LPFDESQQKKLEVPFTLLWH 295 E M A + + P + L + ++ L W Sbjct: 236 SLETIRHMVASGVGITVLPMSSITTMVCSSLNCPEQSRSALRYAYFKEPAPVRRIALAWR 295 Query: 296 KRNSHN 301 + + Sbjct: 296 DSHPNP 301 >UniRef50_A7ZTR6 HTH-type transcriptional regulator yidZ n=122 Tax=Gammaproteobacteria RepID=YIDZ_ECO24 Length = 319 Score = 227 bits (580), Expect = 5e-58, Method: Composition-based stats. Identities = 316/319 (99%), Positives = 319/319 (100%) Query: 1 MKKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPL 60 MKKSITTLDLNLLLCLQLLMQERSVTKAAKR+NVTPSAVSKSLAKLRAWFDDPLFVNSPL Sbjct: 1 MKKSITTLDLNLLLCLQLLMQERSVTKAAKRMNVTPSAVSKSLAKLRAWFDDPLFVNSPL 60 Query: 61 GLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIY 120 GLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSK+IY Sbjct: 61 GLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKRIY 120 Query: 121 QRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 QRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP Sbjct: 121 QRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 Query: 181 CVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQ 240 CVWLRKDHPALH+TWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQ Sbjct: 181 CVWLRKDHPALHETWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQ 240 Query: 241 SLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 SLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH Sbjct: 241 SLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 Query: 301 NPKIVWLRETIKNLYASMA 319 NPKIVWLRETIKNLYASMA Sbjct: 301 NPKIVWLRETIKNLYASMA 319 >UniRef50_Q7NCX0 LysR family transcriptional regulatory protein n=1 Tax=Gloeobacter violaceus RepID=Q7NCX0_GLOVI Length = 301 Score = 227 bits (579), Expect = 5e-58, Method: Composition-based stats. Identities = 47/312 (15%), Positives = 109/312 (34%), Gaps = 23/312 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++ L + + + T+AA++++++ AVS ++A L ++ PLF + T Sbjct: 1 MNFEQLRVFVAVAEHLNFTRAAEKLSLSQPAVSSAVAALETYYKVPLFNRMGRRIELTNS 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + +Q + K + + + + L ++ Q+YP+ Sbjct: 61 GQLLLTEAHKVIQEITTIESKLRETKSLQRGELYIGSSQTVASWWLPPQLQRFRQQYPKV 120 Query: 127 TIKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 +K+ + + + + + + G+VDIG RE +S + + + D + Sbjct: 121 QLKVVSGNTEEIGEWVAAGQVDIGLVEREVRNKS----------LTFNAIGGDKMAFVVG 170 Query: 186 KDHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGR---ERTIAMSLPEFEQS 241 K HP +T LD + + + + IA+ LP + Sbjct: 171 KQHPLWERTNIGLDELKSTRWVLRESGSDVRKFFEYLCFTHNIDADKLDIALELPNCAMT 230 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 A + L + P + + L + + +E F L+ + Sbjct: 231 KRAAEVGAGVALLSVP-LVEKEIKWGALR------SLNTVLKPVMERNFYLISRNSQVTS 283 Query: 302 PKIVWLRETIKN 313 P + ++ Sbjct: 284 PAVKAFSSLVRQ 295 >UniRef50_Q5NYN4 Transcriptional regulator n=4 Tax=Rhodocyclaceae RepID=Q5NYN4_AZOSE Length = 306 Score = 227 bits (579), Expect = 5e-58, Method: Composition-based stats. Identities = 49/315 (15%), Positives = 98/315 (31%), Gaps = 25/315 (7%) Query: 11 NLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVS 70 L + + S T+AA+ + +T AV+ + +L F+ L +S TP Sbjct: 4 RRLQVFSAVAKHGSFTRAAEHLFMTQPAVTFQIKQLEEHFNTRLLERGHGKVSLTPAGEV 63 Query: 71 MEQNLAEWMQMSNLLLDKPHHQ-TPRGLKFELAAESPLMMIMLNALSKQIYQRYPQATIK 129 + + +S L + G + + + L L ++ +YP+ + Sbjct: 64 VLAYADRILDLSEELESRVSELTDELGGTLSIGTSTTIAAYWLPKLLERFKHKYPRVIPR 123 Query: 130 LRNWDYDSLD-AITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDH 188 + + + + E+D+G S + E ++ D V R H Sbjct: 124 VVVGNSQLTEDRVAARELDLGLIEIVSEQPAIERFTA----------ARDELLVICRPGH 173 Query: 189 PAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGR---ERTIAMSLPEFEQSLFM 244 P L + I+ + + G E + L ++ Sbjct: 174 PLASKSRLTAHDLLDHAFITRDPGNAIRELAEQFFAAAGIGIDEVNVCAELGSLATVKYL 233 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 + + A A + + LV++PL K P ++ K + I Sbjct: 234 V--GEGIGFAIASFAAIQRDIREE-RLVSVPLE------PKQYTPLEVIIPKDKFRSSLI 284 Query: 305 VWLRETIKNLYASMA 319 E + MA Sbjct: 285 TTFAEHAVAELSVMA 299 >UniRef50_C0ZGB6 Transcriptional regulator n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZGB6_BREBN Length = 298 Score = 227 bits (579), Expect = 6e-58, Method: Composition-based stats. Identities = 46/301 (15%), Positives = 93/301 (30%), Gaps = 19/301 (6%) Query: 13 LLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSME 72 + + + + +S T+AA+ + S+V+ + L + F LF + T + Sbjct: 1 MQTFREVAKCQSFTRAAEVLGYAQSSVTTQIQNLESEFGVSLFERWGKKIRLTHAGEVLL 60 Query: 73 QNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQATIKLRN 132 + + + Q + L L ++ P+ I L Sbjct: 61 GYSEQLQAVLDEAKANLSEQAQLAGTLRIGTVESLAAFYLPPYLQKFRLEQPRMRIMLAP 120 Query: 133 W-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPAL 191 D + G+ D F +S ++ VL + V HP + Sbjct: 121 GICQDLRQGVKEGKFDFAFVLDWLQDQS---------ELENVVLGEEKLVVVAAPTHPLV 171 Query: 192 HQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQPDN 250 + F I S +++VL+E G + E A + Sbjct: 172 KKEKVETHDFTGETWIFTEKGCSYRGMMESVLREAGATVESSFEFGSLEAIKQCVA--YD 229 Query: 251 LLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWLRET 310 L +A P+ + LV L + + + L++HK+ ++ E Sbjct: 230 LGIALLPKIVVQEEVKNG-TLVILSFSHPDIRVFRQ-----LVYHKKKWMPQALLRFLEL 283 Query: 311 I 311 + Sbjct: 284 L 284 >UniRef50_A3I7R5 Transcriptional regulators, LysR family protein n=1 Tax=Bacillus sp. B14905 RepID=A3I7R5_9BACI Length = 289 Score = 227 bits (579), Expect = 6e-58, Method: Composition-based stats. Identities = 31/310 (10%), Positives = 86/310 (27%), Gaps = 23/310 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +++ L +L +E ++AA ++ ++ +S+ + L PLF T Sbjct: 1 MEIRQLNYFLMLCKELHFSEAAFKLGISQPTLSQQIRVLEGEIGAPLFDRIGKKTVKTEA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQ-TPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 +E + Q +A + L + + +P Sbjct: 61 GELLEHYAQKVHQDLENAKKAISDLIDLNKGHLRIAILPSDLDYRLTEILIDFRKEFPNT 120 Query: 127 TIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRK 186 +++ SL + EVDIG L ++ +++ +++ + Sbjct: 121 KVQVFP-TIKSLTKVLGNEVDIGIG----------LKVEANSHLERIPFYTERYSLFVNE 169 Query: 187 DHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMA 245 +H ++ + + P + + +D G M + Sbjct: 170 NHDLSQRKSVKPEELVDIPLVMYPQGKCGRDLIDKWCDRQGITINSVMETGSATSLFQLV 229 Query: 246 AQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIV 305 + + P Q + + + + + + + Sbjct: 230 QKD--IGATIQPSQLIENFQSLGIRSIPI--------ENAPTRELDIFYRNDKYLSKAAE 279 Query: 306 WLRETIKNLY 315 + + + Sbjct: 280 GFMKRVIERF 289 >UniRef50_C6NW00 Transcriptional regulator, LysR family n=1 Tax=Acidithiobacillus caldus ATCC 51756 RepID=C6NW00_9GAMM Length = 332 Score = 227 bits (579), Expect = 6e-58, Method: Composition-based stats. Identities = 42/310 (13%), Positives = 84/310 (27%), Gaps = 22/310 (7%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 + + L + RS TKAA + + VS + KL PLF + Sbjct: 18 LRQITFRQLQVFLAVSHHRSFTKAADALFLAQPTVSLQMKKLGEIVGLPLFEQIGKEIRL 77 Query: 65 TPLMVSMEQNLAEWMQMSNLLLDKPHHQTP-RGLKFELAAESPLMMIMLNALSKQIYQRY 123 T + E + L + + R + L + L Q++ Sbjct: 78 TDAGQDLYTACREIFAIVENLETQIADRKGIRRGRLRLGVV-TTAKYIAPELLAAFGQQF 136 Query: 124 PQATIKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCV 182 P + + D + I E D+ G+ ++ + V Sbjct: 137 PGIQFSMTVSNRDEIIRRIQDSEDDLYVMGQVPTDEVA---------VEATPFAWNPLTV 187 Query: 183 WLRKDHPALH--QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQ 240 + + HP + L P + A + E I M L E Sbjct: 188 MVPRGHPLTRLGRPVPLAAIAEAPFLIREPGSGTRHAYLRLFAEKDLRPNITMELSSNEA 247 Query: 241 SLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 A + + + + P+ +++ + + L++ + Sbjct: 248 IKHAIASGLGISILSIHSLALEGTEG--------PVEVLDAEGFPILRKWYLVYPRDRVL 299 Query: 301 NPKIVWLRET 310 + E Sbjct: 300 SLTAQKFMEF 309 >UniRef50_A8IAC4 Transcriptional regulator n=1 Tax=Azorhizobium caulinodans ORS 571 RepID=A8IAC4_AZOC5 Length = 313 Score = 227 bits (579), Expect = 6e-58, Method: Composition-based stats. Identities = 44/319 (13%), Positives = 101/319 (31%), Gaps = 28/319 (8%) Query: 1 MKKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPL 60 M + ++L L + Q S ++AA+ + ++ SA+S+++ +L A L + Sbjct: 1 MSMN---MNLRQLRAFVAVAQTGSFSRAARLLGLSQSALSQAVQQLEADLGVRLLDRTTR 57 Query: 61 GLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTP-RGLKFELAAESPLMMIMLNALSKQI 119 + + + + + + L R + + + +L + Q Sbjct: 58 SVQLSAIGREFLPGVQRVLADLDHQLQDLRDLKEHRRGHVTVTCVPSVALRLLPQVLAQF 117 Query: 120 YQRYPQATIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSD 178 + +P ++ +R + A+ G+ ++G + +D L +D Sbjct: 118 QEAHPMVSVAVREAPRHQIITALRSGDAELGVANVPGD----------DPDLDSTFLLTD 167 Query: 179 VPCVWLRKDHPA-LHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPE 237 + +R+DHP H++ + + I++ ++ L Sbjct: 168 SFALVMRRDHPLAAHESVTWEEAGQAGLIAMAPGTGIRLEMERGLPA---PAVPHHEAEH 224 Query: 238 FEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKR 297 L M + +A P L L + ++E L+ Sbjct: 225 PATLLAMVEA--GVGVAPLPGLAWPRPDHAGLTFRPL-------VEPRVERQLFLIKRAG 275 Query: 298 NSHNPKIVWLRETIKNLYA 316 P L I A Sbjct: 276 RDLTPAGRALHRAILAGVA 294 >UniRef50_A9I810 Transcriptional regulator, LysR-family n=5 Tax=Proteobacteria RepID=A9I810_BORPD Length = 329 Score = 227 bits (579), Expect = 6e-58, Method: Composition-based stats. Identities = 43/318 (13%), Positives = 100/318 (31%), Gaps = 29/318 (9%) Query: 6 TTLDL--NLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLS 63 ++L LL + +ER ++AA R++++ +S ++ +L + L + + Sbjct: 29 HAMELEPRLLRYFIAVAEERHFSRAAARLHLSQPPLSYAIRQLESTLGTRLLERTSRHVE 88 Query: 64 PTPLMVSMEQNLAEWMQMSNLLLDKPHHQ-TPRGLKFELAAESPLMMIMLNALSKQIYQR 122 T + + ++ S + + + ++ L L + Sbjct: 89 LTEAGRVLYREAQALLRQSEAIGTLVQRVGAGLRGRLRIGFVGSMLYRGLPDLLAAMRTA 148 Query: 123 YPQATIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPC 181 P L + + ++A+ RGE D+GF P + L ++ Sbjct: 149 LPDVEHVLTELNSHEQIEAVRRGEQDLGFIHANP----------APAEVQTLNLVAEPFV 198 Query: 182 VWLRKDHPAL-HQTWNLDTFLRYPHISICW--EQSDTWALDNVLQELGRERTIAMSLPEF 238 + + HP + +L I S + ++ G I + + Sbjct: 199 LCVPDTHPLARRRRVSLQALAHDDFILFARAASPSYHETVLSLCVTAGFHPAIRHEVRHW 258 Query: 239 EQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRN 298 + +Q L ++ P + L +A P Q +W + Sbjct: 259 LSVAALVSQ--GLGVSIVPACLAR-SGLAGTRFIAFDHPARSVSQ--------AIWPRDT 307 Query: 299 SHNPKIVWLRETIKNLYA 316 P + + ++ Y Sbjct: 308 DA-PLLRTAVDLVRAQYQ 324 >UniRef50_C8WRL7 Transcriptional regulator, LysR family n=2 Tax=Alicyclobacillus acidocaldarius RepID=C8WRL7_ALIAD Length = 303 Score = 227 bits (579), Expect = 6e-58, Method: Composition-based stats. Identities = 52/309 (16%), Positives = 102/309 (33%), Gaps = 20/309 (6%) Query: 13 LLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSME 72 L L ++ SV++AA+ ++VT V++ + +L F LF S L+ TP + Sbjct: 5 LRALVTVVSLGSVSEAARALHVTQPTVTRQIQQLERHFGQALFDRSGKRLALTPAGERVH 64 Query: 73 QNLAEWMQMSNLLLDKPHHQT-PRGLKFELAAESPLMMIMLNALSKQIYQRYPQATIKLR 131 E ++ L + + P + A + L A+ + +P+ ++ Sbjct: 65 AYALEVLRKQEELAESLLEMSNPEAGLVRMGAGLSPTLYRLPAMVARYASMHPRVRFQVV 124 Query: 132 NWDYDS-LDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPA 190 L+ + VD+ + ++ L+ D H Sbjct: 125 TGSSKVTLERLASRVVDLAIVTTPPEDEA---------GVEQVALWRDELVAVAPSYHAL 175 Query: 191 LHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRER--TIAMSLPEFEQSLFMAAQP 248 + + +YP + + E +D++L G ER M E Sbjct: 176 AGKRATIVELAQYPLVVMHGESGLRRQIDDLLHRAGVERPAPPVMETDSLEAMNRFVQAG 235 Query: 249 DNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWLR 308 L + P Q +L LV + + TL+W K + Sbjct: 236 LGLAVVPWPAVADDVTQ-GRLKLVHI------VGCDLGQRTVTLVWRKESHIPAAARAFI 288 Query: 309 ETIKNLYAS 317 E + ++ A+ Sbjct: 289 EWLASVGAA 297 >UniRef50_Q1QWP3 Transcriptional regulator, LysR family n=1 Tax=Chromohalobacter salexigens DSM 3043 RepID=Q1QWP3_CHRSD Length = 296 Score = 227 bits (579), Expect = 6e-58, Method: Composition-based stats. Identities = 45/310 (14%), Positives = 96/310 (30%), Gaps = 22/310 (7%) Query: 7 TLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTP 66 + L +++ +V AA+++ ++ SA S++LA L LF L Sbjct: 4 HVTFRQLQVFVAVIRGGAVNAAARQLRLSQSATSQALADLERQLGVVLFERLGRRLELND 63 Query: 67 LMVSMEQNLAEWMQMSNLLLDKPHHQTP-RGLKFELAAESPLMMIMLNALSKQIYQRYPQ 125 + + + + L+D +AA + + +L L+ + +R+P Sbjct: 64 AGRRLLPYAEKVLNGLDELVDAAREPDGELRGTLHVAASATIGTYLLPMLAGRFIERHPA 123 Query: 126 ATIKLR-NWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 ++LR D + I R + D+G + + E+ D V Sbjct: 124 VDLQLRLRNTEDVMRDIQRFDADLGLIEGQCSES----------RLVSELWCQDEMVVVA 173 Query: 185 RKDHPA-LHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 HP ++ I + + + M L + E Sbjct: 174 APQHPLAARDGLGVEELQAAQWILREPGSGTRAIFEAAIHPHVERIRVRMELDQHEAIKQ 233 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 L + + + L + +L F+L+WH +P Sbjct: 234 AVRAGFGLGCLSRLSVAGELERGELVALRSP---------LQLTRSFSLVWHPERYRSPL 284 Query: 304 IVWLRETIKN 313 + +++ Sbjct: 285 WQAFKVFLRD 294 >UniRef50_Q1YUD1 Probable transcriptional regulator n=1 Tax=gamma proteobacterium HTCC2207 RepID=Q1YUD1_9GAMM Length = 297 Score = 227 bits (579), Expect = 6e-58, Method: Composition-based stats. Identities = 46/309 (14%), Positives = 102/309 (33%), Gaps = 22/309 (7%) Query: 10 LNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMV 69 +N ++ + + S +AA ++ ++ A+S ++ L L + ++ TP Sbjct: 5 INQIVVFTTVARTGSFAEAAIQLYLSQPALSVAMKNLEQSLGGKLLARTTRSVTLTPEGK 64 Query: 70 SMEQNLAEWMQMSNLLLDKPH-HQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQATI 128 + + + H K ++AA L + + + +YP I Sbjct: 65 AFYPVARRLLSEWEQSMQDVRNHFALGRGKLDIAAMPTYTTNFLPKILAEFHSQYPNIHI 124 Query: 129 KLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKD 187 + + + + + ++G + + ++ L+ D L Sbjct: 125 TVHDVIAENVVQMVREERSELGITFAPEDAP----------DLHFQPLYQDRFVAILPFK 174 Query: 188 HPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAA 246 HP L QT L YPH+S+ +D LQE G T A + M Sbjct: 175 HPLLEKQTLKWIDLLAYPHLSLQRPAGTRKLIDQALQEKGLLLTPAFESHQLVSIGRMV- 233 Query: 247 QPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVW 306 + L L+ P + + L A + ++ + + + + Sbjct: 234 -NEGLGLSVVPSTSRAQMEEMGLQCRA-------ISAPVITHQVGIVTRPQQALSAAALA 285 Query: 307 LRETIKNLY 315 +++ I+ Sbjct: 286 MQQLIRAAV 294 >UniRef50_UPI0001B4610F LysR family transcriptional regulator n=1 Tax=Mycobacterium intracellulare ATCC 13950 RepID=UPI0001B4610F Length = 320 Score = 227 bits (579), Expect = 6e-58, Method: Composition-based stats. Identities = 43/314 (13%), Positives = 98/314 (31%), Gaps = 21/314 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L + L + S TKAA+ + V PSA+S+ + + + LF + +S TP Sbjct: 1 MNLQQLRYVVALAEANSFTKAAEAMFVVPSALSQQVGRFESEIGLRLFERTTRSVSLTPA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTP-RGLKFELAAESPLMMIM-LNALSKQIYQRYPQ 125 ++ + + + + + + + + + L + YP Sbjct: 61 GEALMPLVRQVVAGIDQIAVDAQALGGTVVGRLTVGMMEIPSESLDVATLMATFHSHYPD 120 Query: 126 ATIKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 ++ LR+ D ++A+ ++D+ G + + LFS+ + Sbjct: 121 VSVTLRSGGSDVLIEAVRDRKLDVAIVGSNVSRTGGA--------LTFTHLFSEPLIAVM 172 Query: 185 RKDHPALHQ-TWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 HP + + ++ P I D R +A + ++ Sbjct: 173 PAHHPLTKKSSVSIIALAALPFIDFPPGYGLRHETDRGF--ANVTRRVAFEVTRVDEVTH 230 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 + L +A P L P+ + L+ + + Sbjct: 231 FVRKD--LGVALLPESVARTRANADPRLALRPVA-----GADMHRRVNLVAPRPEKRSAA 283 Query: 304 IVWLRETIKNLYAS 317 + + Sbjct: 284 CQAFVGCVADHIEQ 297 >UniRef50_B0KIN0 Transcriptional regulator, LysR family n=20 Tax=Proteobacteria RepID=B0KIN0_PSEPG Length = 313 Score = 227 bits (579), Expect = 6e-58, Method: Composition-based stats. Identities = 57/312 (18%), Positives = 101/312 (32%), Gaps = 21/312 (6%) Query: 9 DLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSP-LGLSPTPL 67 L L ++ SV +A++++ + ++S ++ L F LF+ G+S TP Sbjct: 17 TLRQLKYFVTTVEAGSVAEASRQLYIAQPSISTAIKSLEESFGVQLFIRHHAQGVSLTPS 76 Query: 68 MVSMEQNLAEWMQMSNLLLD-KPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 +QM++ + ++ + + L L QRYP Sbjct: 77 GKRFYAKTRALLQMAHEFEQNALADNDTVAGQIDIGCFETVAPLYLPRLIAGFRQRYPGV 136 Query: 127 TIKLRNWD-YDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 I+LR+ + D + +T G D+ F + E +P P V L Sbjct: 137 DIRLRDGEQQDLIQGLTAGTFDLAFLYDHDLDGTIEAEPLMPP---------QKPYVLLP 187 Query: 186 KDHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 ++H Q +L P I + S ++ E+G I S P E M Sbjct: 188 ENHRFAGQAQVSLRDLCPEPMILLDVAPS-RTYFVSLFNEMGLTPNIVFSSPSIEMVRGM 246 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 Q L + +Y +L ++ + W KR Sbjct: 247 VGQGFGFSLLVTRPHTEYTYDGQRLAMLD-------ITEPVALSGLAAAWLKRVQLTKPA 299 Query: 305 VWLRETIKNLYA 316 E + A Sbjct: 300 QLFVEFCREELA 311 >UniRef50_C8X9S9 Transcriptional regulator, LysR family n=5 Tax=Actinomycetales RepID=C8X9S9_NAKMY Length = 298 Score = 226 bits (578), Expect = 7e-58, Method: Composition-based stats. Identities = 47/314 (14%), Positives = 95/314 (30%), Gaps = 26/314 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +++ L + +E +AA R+ + S +S+++ KL LF S ++ TP Sbjct: 1 MEIRQLEAFVAVAEELHFGRAAARLRLAQSPLSQTIRKLERELGVTLFDRSTRSVALTPA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNALSKQIYQRYPQA 126 ++ + + L + + L L L++ + +RYPQ Sbjct: 61 GAALLPHAHRVFEELELGRQATRAVSGAVYGTVTVGFSGALNHRTLPPLTRAVRRRYPQV 120 Query: 127 TIKLRNW--DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 T+ L D + I RG +D+ F A+ ++ + V L Sbjct: 121 TLNLVAGMLTRDGVLQIERGSLDLCFVALPLDAS---------PAVRSRLIAREPLGVAL 171 Query: 185 RKDHPALHQT-WNLDTFLRYPHISICW--EQSDTWALDNVLQELGRERTIAMSLPEFEQS 241 DHP +L I+ A G + + + Sbjct: 172 PIDHPLAEDPEVDLADLADEDFITTPAASGSGLREAGVRACIGAGFRPRVVQEITDPFMI 231 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 L + A + +A + F + + L W N + Sbjct: 232 LTLVAA--GVGVALISDGVAQIMPSGSV--------FVPLRGAPTYLDHALAWSADNP-S 280 Query: 302 PKIVWLRETIKNLY 315 + + ++ Sbjct: 281 TVLRAVLAVADDVM 294 >UniRef50_B0T3V7 Transcriptional regulator, LysR family n=1 Tax=Caulobacter sp. K31 RepID=B0T3V7_CAUSK Length = 294 Score = 226 bits (578), Expect = 7e-58, Method: Composition-based stats. Identities = 41/312 (13%), Positives = 86/312 (27%), Gaps = 22/312 (7%) Query: 7 TLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTP 66 + L + + S T+AA+ + ++ A++ + + LF S + T Sbjct: 2 HITLGQIRAFVTVASTFSFTRAAEVLGLSQPALTNRIRQFEESLGLRLFDRSTRSVELTN 61 Query: 67 LMVSMEQNLAEWMQMSNLLLDKPHHQTP-RGLKFELAAESPLMMIMLNALSKQIYQRYPQ 125 + + + + LA +L L + P Sbjct: 62 VGRELLPIFRRLVGEFEGAVINARDYASKVKGVVRLACLPSCAATLLPDLIARFQIDNPS 121 Query: 126 ATIKLRN-WDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 AT + + + + VD G + ++ LF D V Sbjct: 122 ATFVVEDALNSRVATMVREDRVDFGIGMADGEAG----------DLELTRLFDDTLQVVH 171 Query: 185 RKDHPALHQTW-NLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 ++HP +++T YP I + S ++ GR T A + ++ Sbjct: 172 PREHPIAQAPVIDVETLSHYPLILMNRGSSVRDLVEGAFLAAGRTATPACEVTYMSTAVA 231 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 + L L+ P + L+ + P Sbjct: 232 LVRA--GLGLSILPSTAVELRSQ-------PDVAARSIDDPAFVRTLVLVRRRNAPLRPV 282 Query: 304 IVWLRETIKNLY 315 + ++I Sbjct: 283 VEAFIDSIFAAV 294 >UniRef50_A6VZS6 Transcriptional regulator, LysR family n=4 Tax=Gammaproteobacteria RepID=A6VZS6_MARMS Length = 301 Score = 226 bits (578), Expect = 7e-58, Method: Composition-based stats. Identities = 43/286 (15%), Positives = 107/286 (37%), Gaps = 23/286 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L + +E+++T+AA+++ + +++ + +L LF GL+ TP Sbjct: 2 MELRHLRYFCAVAEEKNLTRAAEKLFIAQPPLTRQIKQLEEDVGAQLFDRHSRGLTLTPA 61 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + + ++++++ F + + L +L + + Q+ A Sbjct: 62 GKYFWEQAKQMLAKADMVIENTRRIAEEQKAVFSIGFVPSVFYGQLPSLVRDLRQQT-NA 120 Query: 127 TIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 I L + + ++A+ G++DIGF ++ +LF + V L Sbjct: 121 NILLHDLKTGEQIEALKTGKIDIGFGRLIIPDEQ----------VEQTILFQEPLLVALH 170 Query: 186 KDHPALHQ-TWNLDTFLRYPHISICWE----QSDTWALDNVLQELGRERTIAMSLPEFEQ 240 HP L + L+ + P I + ++ G + + + + Sbjct: 171 VGHPLLKKGEPTLEELAKMPMILYPAGQAATPTFADICTSLFTSRGLTTKVTQQVNDLQT 230 Query: 241 SLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKL 286 +L + A + A +++ + +V +PL + Sbjct: 231 ALGLVASE--MGFALVSEQVRHFGRDD---VVFIPLQDKSITCPVI 271 >UniRef50_Q12BV9 Transcriptional regulator, LysR family n=5 Tax=cellular organisms RepID=Q12BV9_POLSJ Length = 323 Score = 226 bits (578), Expect = 7e-58, Method: Composition-based stats. Identities = 50/314 (15%), Positives = 106/314 (33%), Gaps = 20/314 (6%) Query: 2 KKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLG 61 ++ ++L L + E +AA R+N+T +++++A L A LF + Sbjct: 22 PRNPPLIELRLWRQFAAVADELHFGRAALRLNMTQPPLTQAIAHLEALLGLKLFDRTKRS 81 Query: 62 LSPTPLMVSMEQNLAEWMQMSNLL-LDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIY 120 + T ++ + + + L + + LA S + +L + Sbjct: 82 VQLTAAGAALLPEARDLLARAQALPVYARATADGEAGRLRLAFVSTVGFDLLPGWVRTFR 141 Query: 121 QRYPQATIKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 +RYP+ ++L D L A+ RGE+D GF P + + D Sbjct: 142 ERYPKVQLELIEATGDVQLQALERGEIDAGFMLHSP--------GFAPPGLTCRRISQDP 193 Query: 180 PCVWLRKDHPALHQT-WNLDTFLRYPHISICWE--QSDTWALDNVLQELGRERTIAMSLP 236 + + + + ++ L L P + S A+ + G +A Sbjct: 194 LVLAVPEQSVLVGKSGLVLQDLLEQPLVIFPRHILPSLYDAIFAMYHAAGHLPRVAQEAI 253 Query: 237 EFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHK 296 + + + + + L +A P + + Q + L Q +L+W Sbjct: 254 QMQTIVNLVSA--GLGVAWVPDSVRQF-QRPGVVYREL---KRGKGQVVPGCETSLVWAA 307 Query: 297 RNSHNPKIVWLRET 310 +P + Sbjct: 308 GA-ASPALQRFMAF 320 >UniRef50_Q0RXH6 Transcriptional regulator, LysR family protein n=1 Tax=Rhodococcus jostii RHA1 RepID=Q0RXH6_RHOSR Length = 290 Score = 226 bits (578), Expect = 7e-58, Method: Composition-based stats. Identities = 41/308 (13%), Positives = 91/308 (29%), Gaps = 24/308 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +++ L + + +AAK +N+ +S+ + +L LF S ++ T Sbjct: 1 MEIRHLKYFLAVAEHLHYGRAAKSLNMAQPPLSQQIRRLEKILQMELFDRSSRRVTLTNE 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQT-PRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + E + S+ + + + + M L +Q YP+A Sbjct: 61 GQFLLEAAREVVGQSDHFENLAKALRMGEAGQLRIGFAASAMNWGLGTKLRQFRTAYPEA 120 Query: 127 TIKLRNWD-YDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + D A+ +D+ F+ + L + + Sbjct: 121 DVIAHQMSVADQATALQDDRIDLAFTVG----------GLNYENLQVVDLDEEPLRAVIP 170 Query: 186 KDHPALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 DHP +T L + ++ + + G I+ + L M Sbjct: 171 SDHPLAGMETVRLADLSHETFVGYRFDDHLEDIIASACYRAGFTPKISFQGAQSHTLLHM 230 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 + L P + F + + + +++ H R P Sbjct: 231 VSAGFGLG--LLPACDARMGADG--------VVFIDLEPPVPTMRISVVRHWRR-LTPLA 279 Query: 305 VWLRETIK 312 + E +K Sbjct: 280 ERMLELVK 287 >UniRef50_A3ZYQ6 Transcriptional regulator, LysR family protein n=1 Tax=Blastopirellula marina DSM 3645 RepID=A3ZYQ6_9PLAN Length = 293 Score = 226 bits (578), Expect = 7e-58, Method: Composition-based stats. Identities = 39/311 (12%), Positives = 93/311 (29%), Gaps = 25/311 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L+ L + + SV+ A+++ ++ A SK L + LF + GL T + Sbjct: 1 MNLHHLAIFHEVAETGSVSLGAEQLMISQPAASKQLRDFETALGEKLFDRTGRGLRLTTV 60 Query: 68 MVSMEQNLAEWM---QMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYP 124 + + + + ++ + L A + + +L + + +Q++P Sbjct: 61 GKLLNEYARKIFTLEAEAERVVALVRDVR--RGELFLGASTTIAGYLLPQVLARFHQQHP 118 Query: 125 QATIKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVW 183 + + + + D + VD+G + + + D V Sbjct: 119 EIRVHVSVGNTDFVHRQVLDYRVDLGLTEGFVNEP----------GLTATSFAEDELVVV 168 Query: 184 LRKDHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 HP + + D + + + G E M+L E Sbjct: 169 AAATHPLVKKRRVKADDLSGQSFVLRESGSGTRAVQEQAISMCGVEVREVMTLSSTEAIK 228 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 + A L + + + ++ P L+ + +P Sbjct: 229 HVVAAGVGLAIVSRLSVGAELVSGELCAIR--------LADLQIPRPLHLVQAQDRFASP 280 Query: 303 KIVWLRETIKN 313 E + Sbjct: 281 AARAFHEALFA 291 >UniRef50_C3JEG8 Transcriptional regulator, LysR family protein n=2 Tax=Rhodococcus erythropolis RepID=C3JEG8_RHOER Length = 291 Score = 226 bits (578), Expect = 7e-58, Method: Composition-based stats. Identities = 35/305 (11%), Positives = 82/305 (26%), Gaps = 25/305 (8%) Query: 13 LLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSME 72 L +L + + VT A +++ +S+ LA+L LF L + Sbjct: 7 LEWFVVLAETQQVTATADLTHLSQPTLSRKLARLERQIGVTLFDRQGRRLELNRYGEILY 66 Query: 73 QNLAEWMQMSNLLLDKPHHQT-PRGLKFELAAESPLMMIMLNALSKQIYQRYPQATIKLR 131 ++ ++ + + P L ++ + + +P +L Sbjct: 67 RHARIALRALDAAQTEIQSLASPESGTVRLDFLHSFGTWLVPHMLRGYRVEHPGVRFELH 126 Query: 132 NWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPA 190 +D I G D+ + + + + + + DH Sbjct: 127 QDSAQFLVDRIATGTSDLAVVSPQPRDPQ----------VAWMQIAQQSLALAVPADHRF 176 Query: 191 LH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQPD 249 + L P I + LD + G E + + Sbjct: 177 AKLHSVELADAADEPFIGMHPNFGMRRILDELCAAAGFTPNFVFESSELATVGGLVSASF 236 Query: 250 NLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWLRE 309 + + + +V +P+ + L+W K + R+ Sbjct: 237 GVSVMPV-----QDPPIWAEGVVYVPVE-------GAQRKIGLIWSKSRELSDPARTFRD 284 Query: 310 TIKNL 314 ++ Sbjct: 285 YVERT 289 >UniRef50_B2JUD8 Transcriptional regulator, LysR family n=12 Tax=Burkholderia RepID=B2JUD8_BURP8 Length = 298 Score = 226 bits (578), Expect = 7e-58, Method: Composition-based stats. Identities = 39/261 (14%), Positives = 84/261 (32%), Gaps = 17/261 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L + + +ER+VT+AA+R+ + +S+ + L LF + G+ T Sbjct: 1 MELRHIRYFLAVAEERNVTRAAERLGIGQPPLSQQIHALEDELGVRLFRRTGHGVVLTEA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQ-TPRGLKFELAAESPLM-MIMLNALSKQIYQRYPQ 125 S + + + L ++ +F + +++ L + Q YP Sbjct: 61 GESFAADAKRILHDTRLAVENAQSAGRGEIGQFNIGFTGSAAFNPVVSKLIRAYRQAYPN 120 Query: 126 ATIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 T+ L L + VD+ F S P + + + + + L Sbjct: 121 VTLTLAEGNTAQLLAYLDDDRVDVAFVRL---------GSQSPAGVQFHHIAIEPMKIVL 171 Query: 185 RKDHPALHQT-WNLDTFLRYPHISICW--EQSDTWALDNVLQELGRERTIAMSLPEFEQS 241 H + L P + + + + +E G E P+ Sbjct: 172 PATHRLAKKRKIALSALAEDPFVMLPREASPTLHDVIVGACREAGFEPIAGQQAPQLSSV 231 Query: 242 LFMAAQPDNLLLATAPRYCQY 262 + + A ++ P Sbjct: 232 VNLVAAEFG--VSLVPASVCQ 250 >UniRef50_A6VX33 Transcriptional regulator, LysR family n=2 Tax=Marinomonas RepID=A6VX33_MARMS Length = 293 Score = 226 bits (578), Expect = 7e-58, Method: Composition-based stats. Identities = 43/309 (13%), Positives = 103/309 (33%), Gaps = 25/309 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +D+ LL + + S ++A ++ VT AVSK +A L + LF + T Sbjct: 2 IDIAELLTFIKVAETSSFSEAGDQLFVTQPAVSKRIASLESSLGVKLFDRIGRQVQLTEA 61 Query: 68 MVSMEQNLAEWMQMSNLLLDKPH-HQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + + + + + ++ + + L K+ + +P A Sbjct: 62 GIRLLPKARKMAEDLQDIKRSMTLQMQDVSGELRISTGHHIGLHRLPKSLKRFQENFPNA 121 Query: 127 TIKLR-NWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 +++ ++ + +G ++G + I+ ++SD + Sbjct: 122 QLEIEFVQSEEAYQDVLKGRAELGIITL---------SNKENPLIESLPIWSDPLTCVVS 172 Query: 186 KDHPALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 KDHP +L ++ + + + G + + M+ E + Sbjct: 173 KDHPLARYNNVSLIELAQHACVLPNKNTFTRQIAEQAFGKQGLKPQVRMNTNNLEILAML 232 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 + P +L ++ LP +E ++ HK+ + + Sbjct: 233 VH--IGWGWSLLPSTLVD----EKLVVLNLP-------DLNVERKLGVIHHKQRTLSRAA 279 Query: 305 VWLRETIKN 313 V E +K+ Sbjct: 280 VAFIELLKS 288 >UniRef50_Q13QG4 Transcriptional regulator, LysR family n=4 Tax=Burkholderia RepID=Q13QG4_BURXL Length = 302 Score = 226 bits (578), Expect = 7e-58, Method: Composition-based stats. Identities = 42/313 (13%), Positives = 95/313 (30%), Gaps = 26/313 (8%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 + ++L L C +L +E + ++AA+R+++ A+S+ + L L + LS Sbjct: 1 MNHMNLRALQCFVILAEELNFSRAAERLHIAQPALSQQIRSLEERLGTQLVDRARRPLSL 60 Query: 65 TPLMVSMEQNLAEWMQMSNLLLDKPHHQT-PRGLKFELAAESPLMMIMLNALSKQIYQRY 123 T + + + + R + M +L K ++ + Sbjct: 61 TEAGHYLCSEARQILGTLEQMTVVAQEIGIGRRGWLSIGFTRSSMYSVLPPALKAFHEAF 120 Query: 124 PQATIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCV 182 PQ +KL + DA+ + IG + L S+ Sbjct: 121 PQVELKLFEMLTEEQTDALRDMRIHIGIGRQPLAVE----------GCTSYPLLSEPVMA 170 Query: 183 WLRKDHPA-LHQTWNLDTFLRYPHISICWE--QSDTWALDNVLQELGRERTIAMSLPEFE 239 L HP H+ + P I ++ ++ ++ G +A E + Sbjct: 171 ALEPGHPLAAHKKVRIADLADTPLILYPKHQNAQFKRSVLSLYRDAGITPAVAHEAYEIQ 230 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLE-VPFTLLWHKRN 298 ++ + A L + + + + F + + Sbjct: 231 TAIALVAA--GLGVTFIGESVARHGRT--------DVAFRHLTGPGSSYRSTLAATFRTD 280 Query: 299 SHNPKIVWLRETI 311 +P + + Sbjct: 281 DPSPHLRAFLACL 293 >UniRef50_A9C046 Transcriptional regulator, LysR family n=2 Tax=cellular organisms RepID=A9C046_DELAS Length = 317 Score = 226 bits (578), Expect = 7e-58, Method: Composition-based stats. Identities = 44/315 (13%), Positives = 96/315 (30%), Gaps = 25/315 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 + +LL L +ER +AA+R+ +T +S +L L L + TP Sbjct: 16 MKTHLLRYFVALAEERHFGRAAQRLCITQPPLSMALKTLEQDLGASLMDRDAKNVRLTPA 75 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQT-PRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + + D + ++ ++ + + P Sbjct: 76 GEAFLVEARKVLAQLQHAADVVRGVAEGMQGRLDVGITGSMVYRQVPDFCRAFRAERPLV 135 Query: 127 TIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + L + L AI G++D GF ++S P + + + L Sbjct: 136 EVCLHEMSTREQLQAIASGQIDCGFL----------NIASPPDGLQTLSIGEEPFVCCLP 185 Query: 186 KDHPALHQT-WNLDTFLRYPHISICWE--QSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 H Q +L R + E ++ + LQ+ G + ++ + Sbjct: 186 ATHALAQQPDIDLRELARDTFVMFAREVAPANYDNVIACLQQAGIHPHTRHAARQWLTVM 245 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 + + +A P Q +V +PL + + W Sbjct: 246 ALVSAEQG--VALVPSCMQRVGMNG---VVFVPLRGPQQAMTPA----VMAWRADQPA-A 295 Query: 303 KIVWLRETIKNLYAS 317 + E ++ + ++ Sbjct: 296 LLQAFIERVRAMAST 310 >UniRef50_C0D867 Putative uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D867_9CLOT Length = 301 Score = 226 bits (578), Expect = 7e-58, Method: Composition-based stats. Identities = 51/314 (16%), Positives = 93/314 (29%), Gaps = 29/314 (9%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +DL L +++E +T+AA R+++ A+S SL +L LF + Sbjct: 1 MDLLQLKYFCAIVEEGHMTRAAARLSIAQPALSASLGRLEKELGVSLFDRVGRNICLNEC 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNALSKQIYQRYPQA 126 S ++ + + + L + L + +P Sbjct: 61 GQSFYAFVSPALALLENAARSVDDFKQQRLDNLVLG---SVSQTYLQDAIMAFKRLHPDI 117 Query: 127 TIK---LRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVW 183 I + + D + + + D + EVL+ D + Sbjct: 118 RISQFTIEPENAD--RELNQNDFDFLLIPKYLERP----------DFIQEVLYEDRFALA 165 Query: 184 LRKDHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 L HP QT L IS+ + D + G +AM + L Sbjct: 166 LNTSHPLAEQTEVRLADLKDESFISLPKGYAFRDFTDQICLSAGFTPGVAMECFHCQ-ML 224 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 + + L +A P + L+ + LPL P + + K Sbjct: 225 DLISA--GLGVALVPESFRKKC-LYNHTVKVLPLAGPPVI-----RPMLVSYKKARYMTK 276 Query: 303 KIVWLRETIKNLYA 316 E + YA Sbjct: 277 AARAFLEFLHEYYA 290 >UniRef50_Q4KE95 Transcriptional regulator, LysR family n=7 Tax=Pseudomonas RepID=Q4KE95_PSEF5 Length = 303 Score = 226 bits (578), Expect = 8e-58, Method: Composition-based stats. Identities = 52/314 (16%), Positives = 104/314 (33%), Gaps = 21/314 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +DL L + + + +AA+++N + A++KS+ +L F LF G+ T + Sbjct: 1 MDLRDLTYFDTIAELGHLGRAAQKLNRSQPALTKSIQRLEESFGTKLFEREGRGIKLTAV 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNALSKQIYQRYPQA 126 +++ + Q + L + + +L ++ + +R P Sbjct: 61 GELLQRRSRQLQQNIAETHREVRDFASGVLGNIRLGCAASMAEHLLPQMTATLLERAPDI 120 Query: 127 TIKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 T+ L D L +++ G +D+ + + + LF D V Sbjct: 121 TLNLVIGQDDLLRESLRSGRLDMVICP----------MFEGDPHLSHHTLFEDRAVVVAS 170 Query: 186 KDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRE-RTIAMSLPEFEQSLFM 244 +DHP L Y + S +DNV Q ++ + + Sbjct: 171 RDHPIFATPMRLRDLCAYRWVLPGTRVSARRWIDNVFQSHELPLPSVQIETNTISLLPRL 230 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 A+ LL A + + L V L Q + +L +P Sbjct: 231 IAKT-GLLSFLARETLDDFKGIAHLREVPL-------AQTCMRRSIVVLVRAEGYLSPAA 282 Query: 305 VWLRETIKNLYASM 318 L + +K+ Sbjct: 283 QALLDLLKSDGRQF 296 >UniRef50_B0C5B7 Transcriptional regulator, LysR-family n=1 Tax=Acaryochloris marina MBIC11017 RepID=B0C5B7_ACAM1 Length = 300 Score = 226 bits (578), Expect = 8e-58, Method: Composition-based stats. Identities = 68/314 (21%), Positives = 130/314 (41%), Gaps = 20/314 (6%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 + DLNLL+ L +L++ERSV+K A+R+ ++ AVS +L +LR DP+ V L + Sbjct: 1 MDLRGFDLNLLVVLHILLKERSVSKTAERLQLSQPAVSAALNRLRTALKDPILVRDGLQM 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDK--PHHQTPRGLKFELAAESPLMMIMLNALSKQIY 120 PTP + + + + L P + F +A +++ L ++ Sbjct: 61 VPTPRAEQLVEPVQAIVSAIEQTLADPQPFDYSSISRTFRIATNDYGAFVLVPFLMNRMQ 120 Query: 121 QRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 + P T ++ + D A+ GE+D+ + + + + LFS+ Sbjct: 121 KIAPHLTFEIWDIALDVETALREGEIDLVIADAWTLRNCKC----------RKTLFSETF 170 Query: 181 CVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQ 240 +R++HP + +D +L+ H + T +D L + ++R + ++LP Sbjct: 171 TCLVRQNHPRVDTQLTMDDYLQEKHALVSARGRVTGNVDIALSQQNKQRQVQITLPHILA 230 Query: 241 SLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 M A D + + A R + + L P+ D + W R + Sbjct: 231 IPAMMAATDMI-VTVATRIANRFAVDYHLQTFPPPITLD-------GFDIAMAWPHRMDN 282 Query: 301 NPKIVWLRETIKNL 314 + I WLR + + Sbjct: 283 DTAIRWLRNELVAI 296 >UniRef50_B5CY17 Putative uncharacterized protein n=2 Tax=Bacteroides RepID=B5CY17_9BACE Length = 297 Score = 226 bits (578), Expect = 8e-58, Method: Composition-based stats. Identities = 34/311 (10%), Positives = 99/311 (31%), Gaps = 23/311 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L + + ++ ++AA+ ++++ S +S+ + +L D LF + PT Sbjct: 1 MELRQLKYFKEACELQNFSEAARVLHISQSTLSQQIKQLEDELDVLLFDRIGKRIVPTEA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTP-RGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 ++ ++ + + + +++ A + YP+ Sbjct: 61 GLAFLPYAVRAIRDAENGKQIIRDLKGIETGVLHVGVTYSMSPLLI-AALGLFSKTYPKI 119 Query: 127 TIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + + + LD + ++D S + + ++ LFS + + Sbjct: 120 KVNVSFGTSEELLDRLEANQLDFVLSFKPEG---------VSEHLETMPLFSSMLRFIVH 170 Query: 186 KDHPALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 HP + L P I + +D++ ++ E T+ + + + + Sbjct: 171 CSHPLAELSSITLKRLSETPLILPGKGFATRKRVDDLCRKHQLELTVGVEMNDVHTIIHT 230 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 + + + + KL L W + + Sbjct: 231 LRE--GYWGTILTQAAVRGEENL--------VQIPILCADKLTSQGFLFWAQGDYRKKSA 280 Query: 305 VWLRETIKNLY 315 + + ++ + Sbjct: 281 LAFADFLRKVA 291 >UniRef50_B0BQD1 HTH-type transcriptional activator n=15 Tax=Proteobacteria RepID=B0BQD1_ACTPJ Length = 299 Score = 226 bits (578), Expect = 8e-58, Method: Composition-based stats. Identities = 74/316 (23%), Positives = 128/316 (40%), Gaps = 24/316 (7%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 + I T+DLNLL L+QER+VTKAA+R++VT A+S L +LR F DPLFV G+ Sbjct: 2 RDIRTVDLNLLKAFDALLQERNVTKAAQRLSVTQPAMSAMLNRLRDSFGDPLFVRVQHGI 61 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKP-HHQTPRGLKFELAAESPLMMIMLNALSKQIYQ 121 PT +++ ++ + N +L + ++A+ + + + Q Sbjct: 62 EPTARALALMPSVKTVLAEVNRMLRPVEFDPQTAEMTIKIASTDYGLEAIGTPFLSHLKQ 121 Query: 122 RYPQATIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 P+ + D L + +DI +P + + L ++ Sbjct: 122 LAPKIRVAFLPAQDVDLLAQFEQARIDIALVS----------TQHIPADLHSKPLLTEHY 171 Query: 181 CVWLRKDHPALHQTWNLDTFLRYPHISICWEQS-DTWALDNVLQELGRERTIAMSLPEFE 239 +R DHP +Q NLD F + ++ D L +LG+ R +++S+ F Sbjct: 172 VCVMRADHPMANQLLNLDNFCELDFAMMSYDGGQFYGVCDEALAKLGKTRRVSVSVNHFS 231 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 + D ++A P ++ L L LPL + WH+R Sbjct: 232 LLPNILRTTD--VVALIPSRLSHH--LTGLICKTLPLEV-------QGFSLQMAWHERTH 280 Query: 300 HNPKIVWLRETIKNLY 315 +P W+R + Sbjct: 281 QDPAYQWIRNLLVESL 296 >UniRef50_Q21IY2 Transcriptional regulator, LysR family n=2 Tax=Gammaproteobacteria RepID=Q21IY2_SACD2 Length = 299 Score = 226 bits (578), Expect = 8e-58, Method: Composition-based stats. Identities = 47/310 (15%), Positives = 102/310 (32%), Gaps = 25/310 (8%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 IT++D + L + + S + AA+ + +T AVSK +A L + LF ++ Sbjct: 2 ITSMDTDGLKAFLAVAEHHSFSVAAQHLFITQPAVSKRIAALEQELNHILFDRLGRDVAL 61 Query: 65 TPLMVSMEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQIYQRY 123 T ++ + + + +A + + L + ++ + Sbjct: 62 TEAGQALLPRAQAILNSMHEAQRTIREFSGEIVGTLRVATSHHIGLHHLPPILREFAANH 121 Query: 124 PQATIKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCV 182 Q ++ D + + + RG+ D+ +L ++ VL+ D C Sbjct: 122 KQVNLQFDFLDSEQAHEKVLRGDCDLAVVTL---------APTLEENLEASVLWPDPLCF 172 Query: 183 WLRKDHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQS 241 + +HP + +L+ R P I + + G + M+ E Sbjct: 173 IVGANHPLATSKNISLEELSRTPAILPDLNTYTGRLVKHFFDTQGLALNLNMATNYLETI 232 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 M L + P+ + L + +LE ++ HK+ + Sbjct: 233 KMMV--TVGLGWSVLPKTMVDSS-----------LKILPIKNIQLERQLGVVIHKKRTLG 279 Query: 302 PKIVWLRETI 311 E + Sbjct: 280 NAARAFFEVL 289 >UniRef50_D2S9A0 Transcriptional regulator, LysR family n=1 Tax=Geodermatophilus obscurus DSM 43160 RepID=D2S9A0_9ACTO Length = 304 Score = 226 bits (577), Expect = 8e-58, Method: Composition-based stats. Identities = 44/318 (13%), Positives = 105/318 (33%), Gaps = 26/318 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L + +E +AA+R+++ A+S+ + +L L + + T Sbjct: 1 MELRHLRAFTAVAEELHFGRAARRLHLAQPALSQQVKQLEQDVGAVLLERTTRQVRLTSA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPH-HQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 ++ ++ + L + + + + + +L +++ +RYP Sbjct: 61 GTVFLEHAHRVLREAELARESVLVTERGERGELRVGVTGVITWRLLPRMARAYRRRYPHV 120 Query: 127 TIKLRNW--DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 ++LR + A+ G +D+GF + V+ ++ L Sbjct: 121 RLELRPSVFSAAQVSALIDGRIDVGFLRAPVPAGP----------LASRVILNESLMAVL 170 Query: 185 RKDHPALHQT-WNLDTFLRYPHISI--CWEQSDTWALDNVLQELGRERTIAMSLPEFEQS 241 +DHP + +L +S + A + G + P+ Sbjct: 171 PQDHPLAGEPEVHLADLADENFVSYVSMQGSALRDAAVHACFSAGFTPRVVQEAPDTHTV 230 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 + + + +A P + +V P+ + VP L W + + Sbjct: 231 VALV--GAAVGVALMPASAETLQIEG---VVFTPIA----GGVDVRVPIALAWRES-DSS 280 Query: 302 PKIVWLRETIKNLYASMA 319 P + T + + S Sbjct: 281 PVLAGFLATAEEVLPSPG 298 >UniRef50_B1KAV0 Transcriptional regulator, LysR family n=5 Tax=Burkholderia cepacia complex RepID=B1KAV0_BURCC Length = 345 Score = 226 bits (577), Expect = 9e-58, Method: Composition-based stats. Identities = 74/318 (23%), Positives = 125/318 (39%), Gaps = 20/318 (6%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 I +DLNLL L+++R VT+A I ++ A+S +L+KLR F+DPLFV + G+ Sbjct: 1 MDIRQVDLNLLKVFDALLKKRHVTQAGVSIGLSQPAMSYALSKLRELFEDPLFVRTGRGM 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQIY 120 PTP ++ + +A + + + P F L M+ L L + Sbjct: 61 EPTPRAQALGEPVARLLDLVQTEILPMPEFRPAESSRNFVLCMSDIGEMVFLPRLESFLD 120 Query: 121 QRYPQATIKLRNWD-YDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 + P +IK + + + G+VD+ ++ + L+ Sbjct: 121 KAAPHVSIKTVALSMPELEEGLASGDVDLAIGYFP---------GLNSESLKRKALYRHS 171 Query: 180 PCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFE 239 R DHP + T +LD + H+ + E + L + LG + S P F Sbjct: 172 YVCIARDDHPEIGDTLSLDQYRAAAHVMVHPEGREQDVLARTHERLGIRVNVRFSTPRFI 231 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 F+ A D + A + + + + L+ LP P L WH R Sbjct: 232 GVPFVVAGSDMIA-AVPQAVGRRFAEFVNVKLLPLPFPAP-------TYELYLHWHPRFH 283 Query: 300 HNPKIVWLRETIKNLYAS 317 H P W+R+ + L Sbjct: 284 HEPANRWIRDAMSELVKG 301 >UniRef50_Q28M96 Transcriptional regulator, LysR family n=3 Tax=Rhodobacteraceae RepID=Q28M96_JANSC Length = 297 Score = 226 bits (577), Expect = 9e-58, Method: Composition-based stats. Identities = 49/314 (15%), Positives = 104/314 (33%), Gaps = 29/314 (9%) Query: 9 DLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLM 68 DL + +E +AA R+ + A+S+++ L A D LFV + + T Sbjct: 4 DLRQIRYFVATAEELHFRRAADRLGIAQPALSRAIQALEAELDVALFVRTNRSVQITTAG 63 Query: 69 VSMEQNLAEWMQMSNLLLDKPH-HQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQAT 127 E + ++ +L++ R + + L +L K +R+P+ T Sbjct: 64 RVFLDGAREILTLTERMLEETRTAHDGRMGALRIGYTDFAIAGELPSLLKHFQERHPRVT 123 Query: 128 IKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRK 186 +K ++ + + G++D+GF + D V+ S+ + Sbjct: 124 LKPQHGVTQTQIRLLEEGKLDLGFVTGPI----------VRDGFDQRVVQSEALQAVVPD 173 Query: 187 DHPALHQ-TWNLDTFLRYPHISICWEQ--SDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 HP + T ++ + L + + G I L Sbjct: 174 SHPFAGRATLSIADLAEEDFVHGSSRDWQHFYDYLLPMCRRAGFSPRIVQEAFNTAGILG 233 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 + + + + + LVA+P+ + + +W K + P Sbjct: 234 LVSCGMGVTV-----LTERVCSALGPGLVAIPI-----TDADERLVTSAIWRKDHLSGPA 283 Query: 304 IVWLRETIKNLYAS 317 R +++L A Sbjct: 284 ----RHFVEDLCAR 293 >UniRef50_A1VNR0 Transcriptional regulator, LysR family n=2 Tax=Comamonadaceae RepID=A1VNR0_POLNA Length = 305 Score = 226 bits (577), Expect = 9e-58, Method: Composition-based stats. Identities = 46/319 (14%), Positives = 100/319 (31%), Gaps = 22/319 (6%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 + L + + ++RSV+KAA+R+ VT AVS + +L F PL + Sbjct: 1 MVMRPYTLKQMQTFVEVARQRSVSKAAERLFVTQPAVSMQIRQLEDAFGLPLIEPLGRNI 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQIYQ 121 T + + + L + +LA S + L + + Sbjct: 61 QLTHAGEAFLGHAIAALGQFKDLEALMAEHVGMKKGRIDLAVVST-AKYFVPMLLVRFRK 119 Query: 122 RYPQATIKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 +P I+LR + + L + R E D+ GR + ++ Sbjct: 120 LHPGIDIQLRIDNRENILGMMARYEADLVVMGRAPGNL----------DCEATPFATNPL 169 Query: 181 CVWLRKDHPALHQ-TWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFE 239 + DH + + T + + A++ + + + M +P E Sbjct: 170 SIVAAPDHALVRRKTLPFSALGEHGFVVREQGSGTRAAMERLFADQKTPLNVVMEMPSNE 229 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 + L+ R + H + + + L + + + Sbjct: 230 TIKQAVMA--GMGLSFLSRRTMRHELAHGY------IALVDIEGTPLVGNWYITHLSQKK 281 Query: 300 HNPKIVWLRETIKNLYASM 318 +P + +E + ++ Sbjct: 282 LSPAALAFKEFLVEQGGAL 300 >UniRef50_B9X9V4 Transcriptional regulator, LysR family n=1 Tax=bacterium Ellin514 RepID=B9X9V4_9BACT Length = 296 Score = 226 bits (577), Expect = 9e-58, Method: Composition-based stats. Identities = 46/306 (15%), Positives = 105/306 (34%), Gaps = 24/306 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 + + C + +E ++AAKR++++ +SK + +L LF+ + + T Sbjct: 1 MQFRQIECFLAVAEELHFSRAAKRLHLSQPPLSKHIRQLEQELGVQLFIRNRRSVVQTEA 60 Query: 68 MVSMEQNLAEWMQMSNLL-LDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 ++ + + L Q + + ++ S L + L + +R+P Sbjct: 61 GRIYQEKVRNVLYQLEEAKLAAQRAQAGQTGELKIGFLSALFYDFIPPLLMRFRRRFPDV 120 Query: 127 TIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + L +A++ G+VD+ F G I +L D Sbjct: 121 QVTLLEMVAAKQFEAVSDGKVDVAFPGLPPDKPGL--------EISSRILRKDKWYACFH 172 Query: 186 KDHPALHQT-WNLDTFLRYPHISICW--EQSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 +HP Q L+ R + I + AL + +++ +A + + L Sbjct: 173 SEHPLAQQEKVWLEEVRRESFVFIQRAVSPALDDALLEMFRQVNYTPRVAQTASRAQSLL 232 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 + A + ++ P L L + K +++W+ ++ +P Sbjct: 233 SLIAA--GVGISIFPG-AVSALPSAGLVFRPL-------KDKLAPYEHSIIWN-GSNTSP 281 Query: 303 KIVWLR 308 + Sbjct: 282 VLAEFL 287 >UniRef50_A1TYB8 Transcriptional regulator, LysR family n=39 Tax=Proteobacteria RepID=A1TYB8_MARAV Length = 319 Score = 226 bits (577), Expect = 1e-57, Method: Composition-based stats. Identities = 40/312 (12%), Positives = 82/312 (26%), Gaps = 29/312 (9%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 + L L + L +ER +AA+R +V+ +S ++ KL PLF S + T + Sbjct: 1 MTLTELRYVVTLARERHFGRAAERCHVSQPTLSVAVKKLEDELGIPLFERSKSSIRVTEV 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQT-PRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + + ++ D ++ A + + L ++ + P Sbjct: 61 GQRIIEQAQRVLDQVGVIKDMAQDGKNQLNSPLKVGAIYTIGPYLFPHLLPELRRAAPDM 120 Query: 127 TIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + + + E+D + L+ + V L Sbjct: 121 PLYIEENYTASLRQKLRHSELDAIIIALPFEEP----------EVVTLPLYDEPFVVLLP 170 Query: 186 KDHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVL---------QELGRERTIAMSL 235 DHP + + + + + + + + Sbjct: 171 ADHPLTEKEQVTAEEMAKEQLLLLGPGHCFRDQVLESCPPLVDAITKRADNGRPELVTEG 230 Query: 236 PEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWH 295 E M A L + P + + L P L W Sbjct: 231 SSLETIRHMVAS--GLGITVLPLSAATAIKYQEDILAVRPFAAP-----VPFRTVALAWR 283 Query: 296 KRNSHNPKIVWL 307 I L Sbjct: 284 VTFPRPKAIDVL 295 >UniRef50_A4G228 Transcriptional regulatory protein, LysR family n=18 Tax=Betaproteobacteria RepID=A4G228_HERAR Length = 367 Score = 226 bits (577), Expect = 1e-57, Method: Composition-based stats. Identities = 39/313 (12%), Positives = 86/313 (27%), Gaps = 22/313 (7%) Query: 9 DLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLM 68 L L + + + S ++AA+ +++T AVS + KL LF + TP Sbjct: 49 TLRQLKVFETVARLLSFSRAAEELHLTQPAVSTQVKKLEDHAGLALFEQLGKKIYLTPGG 108 Query: 69 VSMEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNALSKQIYQRYPQAT 127 + +Q D K +A L + + + T Sbjct: 109 TELLHYSRTIIQQFQEAEDAMTQFKGITGGKLNVAVI-SAGDYFFPRLLVEFARSHQGVT 167 Query: 128 IKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRK 186 + L + + L+ + D+ R P + Sbjct: 168 LNLSVHNREGLLNQLANNLTDLAIMVRPPTDMDTINEPFAPH----------PYVIVAAP 217 Query: 187 DHPA-LHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMA 245 DH + + T + P + ++++ + IAM + E Sbjct: 218 DHHLVSKKNIPMSTLIHEPFVVREKGSDTWHSMEDGFGSRIDDLNIAMEIKSTETIKQAV 277 Query: 246 AQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIV 305 + ++ + L + + + + + ++ K P Sbjct: 278 IA--GMGISFLSAHTISMELQAG------SLTVLDVEGFPVMLNWYVVHRKNKRLPPVAQ 329 Query: 306 WLRETIKNLYASM 318 R + N + Sbjct: 330 AFRNFLLNEGPEL 342 >UniRef50_C6CDR8 Transcriptional regulator, LysR family n=27 Tax=Bacteria RepID=C6CDR8_DICDC Length = 300 Score = 226 bits (577), Expect = 1e-57, Method: Composition-based stats. Identities = 43/322 (13%), Positives = 93/322 (28%), Gaps = 36/322 (11%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L + L +++ T+AA + +T ++S ++++L LF + T Sbjct: 1 MNLKQLHYFKRLAEKQHYTEAASSLYITQPSLSHAISELEKELGVSLFERHGRNVRITQS 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQ-TPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + P LA + ++ L + Sbjct: 61 GKIFLPYVEGALLELENGRTALKKMCAPHDEVINLAFIYTMGETVVPQLIDRFI----HI 116 Query: 127 ------TIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 + + + D+ I++ L S Sbjct: 117 PENKNKRFSFFQGTTLSIVQDLKEDKFDMALCSHIPDEP----------DIEFIPLISQE 166 Query: 180 PCVWLRKDHPALHQ---TWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLP 236 + +DHP + +L+ + YP I + +D + + IA + Sbjct: 167 LVLVTSRDHPLAQRHDSEIDLEEAIAYPFIFFSQKSGLRQFIDKIFMQKKLIPEIACYVE 226 Query: 237 EFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHK 296 E + + N +A PR + + + L HK Sbjct: 227 EDTAMVGLV--SINYGIAIMPRISTLSHSN---------VQVMRLRNPGQTRYVYLATHK 275 Query: 297 RNSHNPKIVWLRETIKNLYASM 318 + +P V ++ + N SM Sbjct: 276 DRTLSPAAVSFKQFVLNACQSM 297 >UniRef50_C4DMI0 Transcriptional regulator, COG0583 n=2 Tax=Actinomycetales RepID=C4DMI0_9ACTO Length = 458 Score = 226 bits (577), Expect = 1e-57, Method: Composition-based stats. Identities = 52/320 (16%), Positives = 105/320 (32%), Gaps = 30/320 (9%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVN--SPLGL 62 +++++L L + + +E S +AA R+ T S VS+ +A L +F P + Sbjct: 1 MSSVELRHLATMAAVAEEGSFGRAASRLRYTQSTVSQQIAALEKTIGGAVFERPGGPKPV 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQR 122 TPL + E + + L D + ++ + +++L L +++ R Sbjct: 61 RLTPLGSVVLAQGQELLAQAEALTDAVDRFKAGEGRIDIGTFQSVSIVILPRLVRRLRDR 120 Query: 123 YPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCV 182 +P I+L + ++ G++D+ F L +++ L D + Sbjct: 121 HPGCDIRLSEDEPENP---RIGDLDLLF-----------YDRPLDGDVEHLKLIDDPYLL 166 Query: 183 WLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 R L+ P ++ + D ++ L G I E L Sbjct: 167 VSRNGT-FDEGPVALERLDGMPMVAW-PDICDQSRMEEALASHGVRPQIVFRTAGNEALL 224 Query: 243 FMAAQPDNLLLATAPRYCQ---YYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 M + A P +L + L L W + Sbjct: 225 SMVRA--GMGPALLPWLALDGTDAWSDDRLRVHQLEPAPPA-------RQIYLYWQAGRT 275 Query: 300 HNPKIVWLRETIKNLYASMA 319 H+P ++ +A Sbjct: 276 HSPLARAAIRIAGDIATEIA 295 >UniRef50_C6CYK3 Transcriptional regulator, LysR family n=3 Tax=Bacillales RepID=C6CYK3_PAESJ Length = 296 Score = 226 bits (577), Expect = 1e-57, Method: Composition-based stats. Identities = 40/313 (12%), Positives = 90/313 (28%), Gaps = 24/313 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +D+ L + +E +T+AAK +N+ +S+ L + LF S GL+ T Sbjct: 1 MDIRQLRYFLAIAKEGQITRAAKALNMEQPPLSRQLKLMEDELGVILFDRSGKGLTLTHA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQT-PRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + +Q N + + + + + +L +Q + YP Sbjct: 61 GELLRDKAEKLLQEFNETMHEVKELDAGLHGMLAIGSVVS-CISLLPPPIEQFRRLYPNV 119 Query: 127 TIKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 T K+ D+ L + + + ++++ + L SD L Sbjct: 120 TFKIWEGDHFILGNLLEKRDIELIVARLPFESTLHTQPY------SVLPLPSDPYVAVLP 173 Query: 186 KDHPALHQ--TWNLDTFLRYPHISI--CWEQSDTWALDNVLQELGRERTIAMSLPEFEQS 241 T + P +++ + + G E + Sbjct: 174 ASWVKGPDKNTMLMSELADMPFLTLKTDKTIGMHHRVMIEARAHGFEPKVICECSSVAII 233 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALP-LPFDESQQKKLEVPFTLLWHKRNSH 300 + + A + P+ LP + + ++W K Sbjct: 234 VALVAA--GIGATVFPKSVMAS--------FPLPTIKMLTISDADFQSEVGIIWLKDRYL 283 Query: 301 NPKIVWLRETIKN 313 + + Sbjct: 284 SKSARNFIRLFEE 296 >UniRef50_P0ACR6 Uncharacterized HTH-type transcriptional regulator yeiE n=127 Tax=Proteobacteria RepID=YEIE_ECO57 Length = 293 Score = 226 bits (577), Expect = 1e-57, Method: Composition-based stats. Identities = 54/306 (17%), Positives = 95/306 (31%), Gaps = 22/306 (7%) Query: 7 TLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTP 66 + L L +++ S T+A+ + ++ SAVS +L L LF L Sbjct: 2 HITLRQLEVFAEVLKSGSTTQASVMLALSQSAVSAALTDLEGQLGVQLFDRVGKRLVVNE 61 Query: 67 LMVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + + ++ + A S + +L A+ + YPQ Sbjct: 62 HGRLLYPRA---LALLEQAVEIEQLFREDNGAIRIYASSTIGNYILPAVIARYRHDYPQL 118 Query: 127 TIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 I+L + D + A+ VDIGF H I E D V+ Sbjct: 119 PIELSVGNSQDVMQAVLDFRVDIGFIEGPCHST----------EIISEPWLEDELVVFAA 168 Query: 186 KDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMA 245 P L+ P I +D +L + +AM L E Sbjct: 169 PTSPLARGPVTLEQLAAAPWILRERGSGTREIVDYLLLSHLPKFEMAMELGNSEAIKHAV 228 Query: 246 AQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIV 305 + + R + Q L VA+PL +L + H++ + + Sbjct: 229 RHGLGIS-CLSRRVIEDQLQAGTLSEVAVPL-------PRLMRTLWRIHHRQKHLSNALR 280 Query: 306 WLRETI 311 + Sbjct: 281 RFLDYC 286 >UniRef50_A1WHL2 Transcriptional regulator, LysR family n=10 Tax=Proteobacteria RepID=A1WHL2_VEREI Length = 305 Score = 226 bits (577), Expect = 1e-57, Method: Composition-based stats. Identities = 37/311 (11%), Positives = 94/311 (30%), Gaps = 22/311 (7%) Query: 7 TLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTP 66 DL+ + + S AA+ ++++ A+S+ + KL LF + + + Sbjct: 2 NFDLSDMRAFVAVADLGSFRAAAQTLHISQPALSRRVEKLEQAMGFRLFERTTRKVELSA 61 Query: 67 LMVSMEQNLAEWMQMSNLLLDKPHHQ-TPRGLKFELAAESPLMMIMLNALSKQIYQRYPQ 125 + S + L + +A + +L + +++P+ Sbjct: 62 IGRSFVPKARHVLSELENALLGMTDMSDRLRGQVTVACVPSSVPHLLAGAVEAFQRKFPR 121 Query: 126 ATIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 ++L + + L A+ R E D G S + ++++ L + + Sbjct: 122 IRVRLIDETATEILLAVVRSEADFGVSY----------WGAQEPDLEFQGLVQEPFVLAC 171 Query: 185 RKDHPALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 HP + ++ +++ + +D L + L Sbjct: 172 LPGHPLARKRRVKWAELAQHDCVTLPPGTGNRMLIDQALSTVAYPPRWTCEARHVPALLS 231 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 + + PR+ Q L V L + ++ ++ + P Sbjct: 232 LIEAGVGVGA--VPRFAIRGGQGATLASVRL-------VEPEVTRTIGVIKRRARPLMPA 282 Query: 304 IVWLRETIKNL 314 + + Sbjct: 283 AQAFHDLLVAA 293 >UniRef50_D1XD48 Transcriptional regulator, LysR family n=2 Tax=Streptomyces RepID=D1XD48_9ACTO Length = 329 Score = 226 bits (577), Expect = 1e-57, Method: Composition-based stats. Identities = 37/304 (12%), Positives = 86/304 (28%), Gaps = 25/304 (8%) Query: 13 LLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSME 72 L + + + VT+AA + V S +S+++ +L LF +S TP + Sbjct: 40 LAYFEAVARHEHVTRAAHELGVPQSTLSRAMVRLEQDLGVALFARRGRTVSLTPAGRTFL 99 Query: 73 QNLAEWMQMSNLLLDKPH-HQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQATIKLR 131 ++ + D P K + + +L + +P+ +L Sbjct: 100 GSVERALAEVEKAADSVRADADPTAGKVAFGFLHTMGSETVPSLIRAFRADHPRVRFQLV 159 Query: 132 NW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPA 190 ++ + G +D+ + + L + + DH Sbjct: 160 QNYGEAMIERLRAGGLDLCLTSPVPDAP----------DLVARRLDEQRLRLVVPDDHRL 209 Query: 191 L-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQPD 249 + L +++ D++ E G +A E E + A Sbjct: 210 AGRRRVRLAEAAEEAFVTLEPGYGLRRITDDLCTEAGFTPRVAFEGEEAETLRGLVAAGL 269 Query: 250 NLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWLRE 309 + L P + + + + W + P + + Sbjct: 270 GVALLPPPAVAR------------PGVVELTVTAPRAVREIGVAWLDGHPDTPPVAAFKR 317 Query: 310 TIKN 313 + + Sbjct: 318 FLLS 321 >UniRef50_B8DQG2 Transcriptional regulator, LysR family n=6 Tax=Bacteria RepID=B8DQG2_DESVM Length = 337 Score = 225 bits (576), Expect = 1e-57, Method: Composition-based stats. Identities = 43/310 (13%), Positives = 88/310 (28%), Gaps = 18/310 (5%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L + +E +AA+R++V+ +S+ + L LF + + TP Sbjct: 1 MELRQLRYFLAVAEELHFGRAARRMHVSQPPLSQQIQALEEELGVRLFDRTSRTVRATPA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHH-QTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 ++ ++ + + + +++ + L R P Sbjct: 61 GEALRDDVRDLLAGLDAAVERARGTARGERGRLRLGFVVSAAATRFPRAVAAYRARCPGV 120 Query: 127 TIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 ++LR L I GE+D+G L LP D+ + V L Sbjct: 121 RLELREMGTLLQLRRIESGELDVGLLR---------NLDGLPEGFDHAPFLHEPQVVALP 171 Query: 186 KDHPALH-QTWNLDTFLRYPHISICWE--QSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 HP L P I + A+ + G + Sbjct: 172 AHHPLARLGVVPLAALAGVPLILYPRRVFPAAYDAIIAACRGAGFSPEVPQEAVGLNTQR 231 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQL-PLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 + A P + + + VA + L+W + Sbjct: 232 A--LVAAGVGAAIVPASARSEPREGVVYRDVAAGNDVPGGAPGLPYIRLDLVWRAGRD-D 288 Query: 302 PKIVWLRETI 311 + + + Sbjct: 289 ALLRGFLDVV 298 >UniRef50_B8IDW8 Transcriptional regulator, LysR family n=1 Tax=Methylobacterium nodulans ORS 2060 RepID=B8IDW8_METNO Length = 305 Score = 225 bits (576), Expect = 1e-57, Method: Composition-based stats. Identities = 42/319 (13%), Positives = 102/319 (31%), Gaps = 28/319 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +DL L +L +ER +AA+R++++ +S ++ +L LF + ++ TP Sbjct: 1 MDLRQLRYFAVLAEERHFGRAARRLSLSQPPLSHAIRQLEEELGATLFTRTSRQVALTPA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQT-PRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 ++++ +Q + H R + + + L+ + + P Sbjct: 61 GTALQREAKAILQRAADARVLVHDIACGRRGRLRIGFSGSTVYRGLSHILTAMRTEAPDI 120 Query: 127 TIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + LR + ++A+ E+D GF L P +D + ++ L Sbjct: 121 KVALREMNSAEQVEALLHDELDAGFV----------HLRERPEGLDGILFHAEPFVTCLP 170 Query: 186 KDHPALHQT----WNLDTFLRYPHISICW--EQSDTWALDNVLQELGRERTIAMSLPEFE 239 HP L + ++ + + G + + + Sbjct: 171 VGHPMAATPDPSETRLIDLQHEDFVLFSRTVSPDYYESILAICRTAGFLPRVRHEVRHWL 230 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 + A +A P+ +QL + + +P ++ +W Sbjct: 231 TVAALVAH--GAGVALVPQ-ALAGSQLAGVVFLPIPPS-------PIQSETWCVWKASAP 280 Query: 300 HNPKIVWLRETIKNLYASM 318 + ++ + Sbjct: 281 APGILETFLPQVRAAMKDL 299 >UniRef50_C7NK10 Transcriptional regulator n=1 Tax=Kytococcus sedentarius DSM 20547 RepID=C7NK10_KYTSD Length = 300 Score = 225 bits (576), Expect = 1e-57, Method: Composition-based stats. Identities = 47/315 (14%), Positives = 89/315 (28%), Gaps = 21/315 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L L L R+ +AA V+ +S + KL A L + TP Sbjct: 1 MNLRDLEYLVALGDHRNFGRAAAACGVSQPTLSTQVKKLEAVLGCALVERAGRQTLLTPA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQ-TPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + + + PR L L +L + ++Q P+ Sbjct: 61 GEQIAGRARRMLGHAEAIHRVAEQARDPRSGSLRLGIFPTLAPYLLPHVVPAVHQALPEL 120 Query: 127 TIKLR-NWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + L D + + G +D + E LF + + + Sbjct: 121 NLLLVEERTPDLMQQLREGTLDAVVLAGP----------LTDPGLAVEPLFREDFLLAVP 170 Query: 186 KDHPALHQ-TWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 DHP Q T + + + +V + G E M Sbjct: 171 LDHPLAGQETVDPSVLGDESVLLLEDGHCLRDQALDVCRSSGAVEMDGFRATSLETLRHM 230 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 A + + PR + E L W + + + Sbjct: 231 VAS--GVGVTLMPRMAVDRPGGPGG------VATVEFTAPAPHRDIVLAWRTSSVQDDLM 282 Query: 305 VWLRETIKNLYASMA 319 L + ++++ A +A Sbjct: 283 PELADLLRSVPAPLA 297 >UniRef50_UPI0001788565 transcriptional regulator, LysR family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001788565 Length = 295 Score = 225 bits (576), Expect = 1e-57, Method: Composition-based stats. Identities = 41/312 (13%), Positives = 105/312 (33%), Gaps = 24/312 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L + + + +TKA+K +++T A+S +++KL + PLF + + Sbjct: 1 MELTQLEYFLTVSRLQHMTKASKALSITQPALSHAISKLESELGVPLFERNGRNVKLNRY 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQT-PRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + + +Q + + + P ++ + L + ++ AL + +P+ Sbjct: 61 GSMFARWVEQALQDIQNGMQEIEESSNPDTGIISVSYLNILGVDLVPALVRAYQLAHPKV 120 Query: 127 TIKLRNWD-YDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 +L + D + + +G D+ + RES L + + + Sbjct: 121 RFELHQGNLGDIDEHLEKGHSDLMITSRESTIDQHNWLVM----------RTMPLYIVVS 170 Query: 186 KDHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 H ++ +L P + + + + Q G + + Sbjct: 171 SHHRLANRPSLSLMDLSGEPFVGLKHNCGLRATIQSRFQHTGFILSSTYDAEDLATVAGF 230 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 + L ++ P+ + L + + L W + +P Sbjct: 231 IKE--GLGVSVLPKTAGLMLEG---------LSWIPITDEGWFWEIGLKWREDRYLSPAA 279 Query: 305 VWLRETIKNLYA 316 E +++ Y Sbjct: 280 RRFIEYVEHHYQ 291 >UniRef50_Q30XG7 Conserved hypothetical transcriptional regulator, LysR family n=1 Tax=Desulfovibrio desulfuricans subsp. desulfuricans str. G20 RepID=Q30XG7_DESDG Length = 309 Score = 225 bits (576), Expect = 1e-57, Method: Composition-based stats. Identities = 80/322 (24%), Positives = 136/322 (42%), Gaps = 25/322 (7%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 I++++LNLL+ L+ L+ E +VT+AA+R+++T S +SK+LA+LR FDDPL V S L Sbjct: 1 MDISSVNLNLLVALKALLDEGNVTRAAERLHITQSGMSKNLAQLRELFDDPLLVRSGNAL 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPH-HQTPRGLKFELAAESPLMMIMLNALSKQIYQ 121 T +E L + + L + F LA + +L I Sbjct: 61 VLTERARELEGPLEMVLGNVHALFEAQRFDPATCRRSFTLAVTDYVAQYILPDALGAILA 120 Query: 122 RYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPC 181 P I+ W+ DS+ A+ G++D+ L +P +++ + D Sbjct: 121 AAPGIDIQAIGWEPDSMRALAEGKIDMA----------TCLTEGVPASVEQLRVGEDRFA 170 Query: 182 VWLRKDHPA-LHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQ 240 +R HP LD +++ H +I +D VL +LG R I + +P + Sbjct: 171 CLMRAGHPLAAAGAMRLDRYVQADHAAITIGGDKVRIIDRVLGKLGHSRNIRLRVPFYAS 230 Query: 241 SLFMAAQPDNLLLATAPRYC-----QYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWH 295 ++ + ++ D LLL L LP D ++++WH Sbjct: 231 AVEIVSRTD-LLLTLPAHVARNVIQARNPSEPALAWAPLPFAVD-------SFEYSIIWH 282 Query: 296 KRNSHNPKIVWLRETIKNLYAS 317 R +P W+RE + S Sbjct: 283 ARFHGDPGHRWVREMLFAQMQS 304 >UniRef50_D1CCM2 Transcriptional regulator, LysR family n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=D1CCM2_THET1 Length = 310 Score = 225 bits (576), Expect = 1e-57, Method: Composition-based stats. Identities = 43/313 (13%), Positives = 92/313 (29%), Gaps = 19/313 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++LN L L L+ S T AA++++++ AVS+ + L P+ + PT Sbjct: 1 MNLNQLRVLVALINRGSYTAAAEQLHLSQPAVSQQIKALETACGVPVVERVDGKIVPTYA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQ-TPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + + + +F + A + M + L + +P+ Sbjct: 61 GEVLYRYAQSMLHIEEEAQHALAGIKAGVKGRFVVGANTTGGMYITPPLIAAYRKNHPET 120 Query: 127 TIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRK 186 I R +SL A + + E + D + Sbjct: 121 EIIFRIEGTESLLA---------ALANRLLDLAIVGGPVTDKKLKAEPILPDRVVLITSP 171 Query: 187 DHPA-LHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMA 245 HP Q I + + +++ L+ G IAM + E Sbjct: 172 HHPLSSRQQIRAQDLANERFIIARYGSTTRRLIESRLRHKGVNLHIAMEMAGTEDIKKAV 231 Query: 246 AQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIV 305 L +A ++ L E + + ++ + + P Sbjct: 232 EA--GLGVAMVSQWSVLREVAAGH------LRQIEIVDLDIRRDYVMVTNPARYYTPAAE 283 Query: 306 WLRETIKNLYASM 318 + ++ + Sbjct: 284 DFMDFVRQYAPQL 296 >UniRef50_P94387 Uncharacterized HTH-type transcriptional regulator ycgK n=2 Tax=Bacillus RepID=YCGK_BACSU Length = 324 Score = 225 bits (576), Expect = 1e-57, Method: Composition-based stats. Identities = 49/331 (14%), Positives = 106/331 (32%), Gaps = 42/331 (12%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +D+ ++ + + +S TKAA+ +++ ++S+ + KL A LF S ++ TP Sbjct: 1 MDIKVMEYAAEIARRQSFTKAAEHLHIAQPSLSQQIKKLEAELGLTLFHRSHGSVTLTPH 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRGLK-FELAAESPLMMIMLNALSKQIYQRYPQA 126 + + ++ + LL + ++ + + + L KQ RYP Sbjct: 61 GRRFIEKAEDIIRSRDDLLREMQERSQGIGHKLSIGIPAVTGRYLFPPLLKQFLARYPHV 120 Query: 127 TIKLRNWDYDSLDAI-TRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 ++L D SL+ + +GEVD+ + L ++ + + Sbjct: 121 EVQLVEKDPVSLEKMTAKGEVDLSVLSLPIE----------DERLSITPLLTEPVVLAVP 170 Query: 186 KDH---------PALHQT----------WNLDTFLRYPHISICWEQSDTWALDNVLQELG 226 K+ + + +D P I + + ++ E G Sbjct: 171 KEKQRWMPPELVALIEKALEEDEGRQPCVPIDMVRNVPFILLKEGFGFRRTVLDLCAESG 230 Query: 227 RERTIAMSLPEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKL 286 + A E + + A + L + AP + P S Q Sbjct: 231 FKPNAAFKTSHIETAQSLVA--NGLGVTMAPNMVRRDKD---------PGVIYLSIQSAP 279 Query: 287 EVPFTLLWHKRNSHNPKIVWLRETIKNLYAS 317 ++ K + E + Sbjct: 280 SRTLVFVFLKNRYVSLTAQAFMELSRESLKQ 310 >UniRef50_C6P9X7 Transcriptional regulator, LysR family n=1 Tax=Thermoanaerobacterium thermosaccharolyticum DSM 571 RepID=C6P9X7_CLOTS Length = 297 Score = 225 bits (575), Expect = 2e-57, Method: Composition-based stats. Identities = 45/308 (14%), Positives = 96/308 (31%), Gaps = 21/308 (6%) Query: 7 TLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTP 66 ++ L + + S+++AA+ + +T A+S+++++L ++ LF L T Sbjct: 2 DMNFRELNIFLSVCELGSMSEAARHLYMTQPAISQAISELEGEYNIKLFDRIGKKLVLTH 61 Query: 67 LMVSMEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNALSKQIYQRYPQ 125 + + + N + + K +L A + +L L + + Y Sbjct: 62 AGEILRDYGKKINLLLNEAENTLRDISDMKMGKLKLGASRTVGTYLLPQLIGEFLKIYKN 121 Query: 126 ATIKL-RNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 + + + + I E+D+G H I+ + D + Sbjct: 122 IELPFYIDNTSEIVKMIHENEIDLGIVEGPIHS----------DNIEVKYFLDDELYLIC 171 Query: 185 RKDHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 KDH + N D I +N L+ E I + L E Sbjct: 172 SKDHNWAKKKIINKDDLSLENIIIREVGSGTREVFENTLKAHNIEYNIKLELNSTEAIKR 231 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 L ++ + L + L E K +++HK + Sbjct: 232 AVEAN--LGVSVISKLAIKEE------LKSSRLVKVEIDGVKFLRQLNIIYHKDKYLSEL 283 Query: 304 IVWLRETI 311 + + Sbjct: 284 CKKFIDFL 291 >UniRef50_A4JMP2 Transcriptional regulator, LysR family n=1 Tax=Burkholderia vietnamiensis G4 RepID=A4JMP2_BURVG Length = 299 Score = 225 bits (575), Expect = 2e-57, Method: Composition-based stats. Identities = 46/310 (14%), Positives = 97/310 (31%), Gaps = 25/310 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLS--PT 65 +DL ++++ + KAAKR+ ++ A+SK++ L L G++ T Sbjct: 1 MDLKAFRYFDEIVRQGNFGKAAKRLPLSQPALSKAIRLLEDELGVTLLERGRRGVAVKLT 60 Query: 66 PLMVSMEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQIYQRYP 124 + Q+ + + + L + A + +RYP Sbjct: 61 SAGEVVLQHARSILAERERMQFDLDALRDLDRGELRLGLPPVGSAELFAAPLAEFRERYP 120 Query: 125 QATIKLRN-WDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVW 183 +I L + A+ GE+++ + + + + + Sbjct: 121 GVSIHLHEHGSAELEQAVRDGELELAATMLPVRT-----------DLQAMFIRREPMVLA 169 Query: 184 LRKDHPA-LHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 + + H H +L P I++ + T L G + +L Sbjct: 170 VPRGHALETHVRVHLHELNGVPFIALNEGFALTRRLREACIAQGFTINEVAHSAQPNFAL 229 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 + A L + PR + + L+ L LE ++W K + + Sbjct: 230 ALVAA--GLGVTCLPRLVARRHGNAGVRLIDLD-------APGLEWRVAIVWRKGTTLSW 280 Query: 303 KIVWLRETIK 312 + IK Sbjct: 281 AARAWLDLIK 290 >UniRef50_A0KPQ5 Transcriptional regulator n=1 Tax=Aeromonas hydrophila subsp. hydrophila ATCC 7966 RepID=A0KPQ5_AERHH Length = 307 Score = 225 bits (575), Expect = 2e-57, Method: Composition-based stats. Identities = 50/313 (15%), Positives = 102/313 (32%), Gaps = 19/313 (6%) Query: 7 TLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTP 66 + + SV++AA ++++ SAV+ ++ +L LF +P G+S T Sbjct: 2 NFTFRQIRYFVAVADSFSVSRAAAELHISQSAVTSAIRELETELGAALFERNPRGVSLTT 61 Query: 67 LMVSMEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQIYQRYPQ 125 + + + + + + + L+ + + +P Sbjct: 62 QGHQFLLHARRILGAMTEAGQSLKAVAQQDQGRLTIGVTTLVAGYYLSEALGRFRRAFPA 121 Query: 126 ATIKLRNWD-YDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 I+++ + I GEVD+G + A D E+L VWL Sbjct: 122 VQIEVKEDEQPYLEHQIVNGEVDVGIL--------MTNRTIRQEAFDTELLTRSPLRVWL 173 Query: 185 RKDHPA-LHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 +HP T +L P IS+ +Q + L+ G I + E Sbjct: 174 AANHPLCAESTLSLKALGEEPMISLTADQ-LDQIIGGGLRRYGIAPRIVLRTASVEAVRS 232 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 + A L A P + L Q + ++ + L+W + + Sbjct: 233 LVASQLGL--ALLPDFAYRPWSLEQERV-----EARAIKEPIPAIDIGLVWRRGSRLEWT 285 Query: 304 IVWLRETIKNLYA 316 + +++ Sbjct: 286 AREFIDIVRDQSR 298 >UniRef50_Q39IT2 Transcriptional regulator, LysR family n=8 Tax=Burkholderia RepID=Q39IT2_BURS3 Length = 309 Score = 225 bits (575), Expect = 2e-57, Method: Composition-based stats. Identities = 45/314 (14%), Positives = 101/314 (32%), Gaps = 20/314 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +DL L +++ +VT A++ ++V AVS+ + L L S G++PT Sbjct: 1 MDLRQLRYFVKVVECGNVTHASEALHVAQPAVSQQMRNLEQDLGMQLLERSVRGVAPTAA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKP-HHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 ++ Q+ E ++ ++ + + + S ++ L++ + RYP Sbjct: 61 GRTLYQHALELLRQADGTRELLRRDADTPQGRVTVGMPSSTARVLAIPLARAVRDRYPGI 120 Query: 127 TIKLRNWDYDSLDAITRG-EVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 ++L LD + +D+ R I L ++ + Sbjct: 121 MLELIEAPSADLDTLLERTRLDLAIVVDAVDTR----------GIAIHRLLTETLYLITW 170 Query: 186 KDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMA 245 LD + P + + +D ++E G I+ Sbjct: 171 PGFQVPGDPVPLDAIAQMPLVLPSAPNTIRNRVDWAMREAGLSYEISFEASSTGLLFAAV 230 Query: 246 AQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIV 305 L + P + + + L + +L WH + + Sbjct: 231 MAQ--LGVTILPWTAAH------VEIEERKLKLSTVAHRLFARDLSLCWHDTALVSNAVQ 282 Query: 306 WLRETIKNLYASMA 319 ++ I L+ ++ Sbjct: 283 KVKAEIVRLFDTLG 296 >UniRef50_Q3A916 Transcriptional regulator, LysR family n=1 Tax=Carboxydothermus hydrogenoformans Z-2901 RepID=Q3A916_CARHZ Length = 302 Score = 225 bits (575), Expect = 2e-57, Method: Composition-based stats. Identities = 47/310 (15%), Positives = 110/310 (35%), Gaps = 23/310 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L + + RS TKAAK +++T A+S + + ++ LF S G+ TP Sbjct: 1 MNLYQFELFCQIAKVRSFTKAAKLMHLTQPAISAQVQAMENFYGTKLFERSATGVKLTPA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + ++ L + + + A S + L ++YP+A Sbjct: 61 GELVYKYAQHFLAEHEKLEREIDNLLGTNAQTIVIGASSTIGNFALPCNVWSFKEKYPEA 120 Query: 127 TIKL-RNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 I++ + +D + +VD G + ++ + + + Sbjct: 121 NIRIEVDNSKKVIDMVMEDKVDFGLAEGPE---------FTHPDLEVKKVGESQVVIITS 171 Query: 186 KDHPALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGR---ERTIAMSLPEFEQS 241 + P + ++ + P I S + +++ G E I + L F+ Sbjct: 172 PELPLARQDSITVEELKKLPLIMREPGSSVREVFFDAIKKAGVPAKELNIVLELGSFQGV 231 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 L + + ++ + +++ L + + +L +PF L++ K + + Sbjct: 232 LEAVKKGHGVSISCLEAIKKEFHRKE--------LHYLTLKDMELTMPFLLVYRKDRAFS 283 Query: 302 PKIVWLRETI 311 P I Sbjct: 284 PLAKRFLRFI 293 >UniRef50_UPI0001B58B0A LysR family transcriptional regulator n=1 Tax=Streptomyces sp. AA4 RepID=UPI0001B58B0A Length = 301 Score = 225 bits (575), Expect = 2e-57, Method: Composition-based stats. Identities = 50/315 (15%), Positives = 94/315 (29%), Gaps = 25/315 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++ L + +E S T+AA+R+ T S VS ++ L LF S ++ + Sbjct: 1 METRQLEHFVAVAEELSFTRAAQRLFATQSTVSATIRALETDLGATLFDRSTRRVALSTA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQ-TPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 ++ + + + + L L ++R+P Sbjct: 61 GELFLPEAKAALEAVERAREVVQQASAGLRGSLRIGTLTSMNAFDLPVLLGAFHRRHPLV 120 Query: 127 TIKLR---NWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVW 183 + L D + G +D+ G +D L S Sbjct: 121 DLHLTVSLTGSSGLADDVRHGRLDVALLGLSRAELG---------GLDATQLASVPYYAV 171 Query: 184 LRKDHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 L HP + L + + A+D LG R +A+ + + Sbjct: 172 LPDSHPLAEQASVRLPELDGELFVDCPRGFGNRIAVDREFAALGLSRRVAVEVADMRTVP 231 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 A L +A P + +V +PL L P T++ + + Sbjct: 232 RYVAA--GLGVAVLPGTARLDLPG----VVPIPLA-----DTSLTWPLTVVVSAKRPPSQ 280 Query: 303 KIVWLRETIKNLYAS 317 + L+E A Sbjct: 281 ALRTLQELFVAAAAE 295 >UniRef50_B0C1S6 Transcriptional regulator, LysR family n=2 Tax=Cyanobacteria RepID=B0C1S6_ACAM1 Length = 298 Score = 225 bits (575), Expect = 2e-57, Method: Composition-based stats. Identities = 52/310 (16%), Positives = 103/310 (33%), Gaps = 26/310 (8%) Query: 7 TLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTP 66 +++ L +L +E +AA R+++T A+SK + L LF + ++ T Sbjct: 4 SIEFRQLQSFVVLAEELHFGRAADRLDITQPALSKQILVLEKAVGVQLFFRTKRTVTLTH 63 Query: 67 LMVSMEQNLAEWMQMSNLLLDKPHH-QTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQ 125 + + + + + + + +L L +Q QRYP+ Sbjct: 64 AGQTFLHQARQLLLQRDQAILLTRRTGDGEIGQLSIGFTKTATQTVLPQLLRQFVQRYPE 123 Query: 126 ATIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 + LR + A+ + +D+ F R + +++ ++ L Sbjct: 124 VDLDLRELATEAQVTALNQDNIDVAFLHPPIDQR----------GLQLQIILAESFVAVL 173 Query: 185 RKDHPALH-QTWNLDTFLRYPHISICWEQS--DTWALDNVLQELGRERTIAMSLPEFEQS 241 HP +H L+ F P I + V Q G + I + Sbjct: 174 PPQHPFVHLDAIPLEAFANEPLIVHPRREGPILYDGFQQVCQRAGFQPNIIKESITLQTR 233 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 L + A L + Q LV + Q +++ F W + N+ N Sbjct: 234 LCLVAA--GLGITFVSDRLQ--------ALVGTNVVCRPIQDCPIQLEFGAAWRQ-NAAN 282 Query: 302 PKIVWLRETI 311 P + E + Sbjct: 283 PVLQNFLELL 292 >UniRef50_B9Z173 Transcriptional regulator, LysR family n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z173_9NEIS Length = 296 Score = 225 bits (575), Expect = 2e-57, Method: Composition-based stats. Identities = 44/314 (14%), Positives = 98/314 (31%), Gaps = 22/314 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +D+ L +++ +S T+AA + VT +SK + L PL + + Sbjct: 1 MDIKALRYFIEVVRRQSFTRAADALFVTQPTISKMVKHLEEELGVPLIIREGRSFQLSDA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + + + L + + + + + + YP Sbjct: 61 GKVAYERGQDVLAAMSRLKTELSDLSALTRGELIVGLPPMVGGAFFAPVVSSFRAHYPNV 120 Query: 127 TIKLRNWDYDSLDA-ITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 +K+ + S+++ I G+++IG + + S + D C+ Sbjct: 121 ELKMVEYGARSIESNIRSGQLEIGVAVLPVDRQVFNTFSFV----------RDRLCLVAP 170 Query: 186 KDHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 Q L P + + S + + + LG+ IA ++ M Sbjct: 171 DQSRWHGQRNIKLADIADEPIVFYPEDFSLSTLVSQGFRRLGKTIHIAGRSAHWDFIAAM 230 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 L +A P L P +K++ L+W K + Sbjct: 231 VEA--RLGIALLPESVAA-------RLYGRPFDVIPLDEKEIIWHLALIWQKDVYLSHAA 281 Query: 305 VWLRETIKNLYASM 318 + +++ S+ Sbjct: 282 RAWIQMSRDMLGSL 295 >UniRef50_B0N9C4 Putative uncharacterized protein n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0N9C4_EUBSP Length = 296 Score = 225 bits (575), Expect = 2e-57, Method: Composition-based stats. Identities = 41/311 (13%), Positives = 94/311 (30%), Gaps = 26/311 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++LN L L T+AA+++++T ++S +++ L LF + T Sbjct: 1 MNLNQLQYFVTLAHMEHYTRAAEKLSITQPSLSHAISSLENELGTYLFEKQGRNVVLTKY 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNALSKQIYQRYPQ- 125 + E + + + + K T ++ + + K P Sbjct: 61 GRLFMEYAEEALSILDAGIRKMKAMTSETSGHIDMGYIYTQGGEFIPEVVKGFLNENPHR 120 Query: 126 -ATIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVW 183 N L I + D+GF + +++ + + Sbjct: 121 EVEFGFHNGVTEKILKGIREEKYDVGFCS----------MKEGQKDLEFFPVAQEKLIAA 170 Query: 184 LRKDHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 + HP + + YP I E +D + +E G + I + E + Sbjct: 171 VPLGHPLASRGSVEIAELAVYPQIFFNEESGLRPVIDQIFKEQGEKPDIRYMVDEDSALV 230 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 + A+ + + + ++ F E + ++ K P Sbjct: 231 GLVAKGFGVGIVP-----------DVPAIRSMRAAFLEIENLNYRRLIYMVTCKNKYLAP 279 Query: 303 KIVWLRETIKN 313 + +K+ Sbjct: 280 IAKDFIDYVKS 290 >UniRef50_B5HHH0 YwqM n=1 Tax=Streptomyces pristinaespiralis ATCC 25486 RepID=B5HHH0_STRPR Length = 297 Score = 225 bits (575), Expect = 2e-57, Method: Composition-based stats. Identities = 49/312 (15%), Positives = 90/312 (28%), Gaps = 20/312 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +++ LL+ + + S T+AA + S+V+ + L + LF + T Sbjct: 1 MEIRLLVTFEKVAAHLSFTQAAAELKYAQSSVTSQVRSLESSLGTELFDRLGSRIRLTEA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQAT 127 + +++S + L L L + + RYP+ Sbjct: 61 GERLVPYARRIIELSEEARAAVAETDEPAGTINIGTMESLTSYRLPELLELFHHRYPRIK 120 Query: 128 IKLRN-WDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRK 186 + LR ++ A+ +G DIGF + EVL + + Sbjct: 121 LSLRPTLGDETRRALRQGVYDIGFLMERETE---------HTGLRSEVLAPEPLVLVAAP 171 Query: 187 DHPALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMA 245 HP + +N L+E M E + Sbjct: 172 GHPLAGAGGLTTPDLADAQLVGTEPGCPYRDLFENELRERTGAPPPFMEFGTIEATKRGV 231 Query: 246 AQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIV 305 A L +A PR + LVALP + + + W + + Sbjct: 232 AA--GLGVALLPRMTVRAELASGV-LVALP------WEPPFRLHTQVAWREGKRLPRHVR 282 Query: 306 WLRETIKNLYAS 317 + L Sbjct: 283 LFIDETVRLVRE 294 >UniRef50_C8NJC1 LysR family transcriptional regulator n=9 Tax=Corynebacterium RepID=C8NJC1_COREF Length = 298 Score = 225 bits (575), Expect = 2e-57, Method: Composition-based stats. Identities = 35/309 (11%), Positives = 88/309 (28%), Gaps = 22/309 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 + ++ L + + +T+ A R+ + +S+ +A++ PLF + L P Sbjct: 1 MRIDDLRLFIEVAESGHLTETADRLGIAQPTLSRRMARVEKHVGTPLFERAGRRLHLNPR 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQ-TPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + ++ + + P L L M+ L + +P+ Sbjct: 61 GQAFLPHARRITAELDMAVTQVKRLMDPELGTIRLDFMHSLGTWMVPELIRTFRTDHPRV 120 Query: 127 TIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 +L + + + D+ G + + + L + + Sbjct: 121 EFELHQGPANELVARVLDDAADLALVGPRPAE--------VDAGLGWAPLLRQRLALAVP 172 Query: 186 KDHPALHQ-TWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 + H + L P +++ LD + G I E + Sbjct: 173 EGHRLDGEGPVELREAAGEPFVAMLPGFGTRLLLDALATASGITPDIVFESMELTTVSGL 232 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 + + + + + L L + L+W + P + Sbjct: 233 VSAGLGVGVLP---MGDPHLPTVGVKLRPL--------EPATHRELGLVWRADSGPAPAV 281 Query: 305 VWLRETIKN 313 R+ + Sbjct: 282 EVFRDFVAR 290 >UniRef50_Q67PU0 LysR family transcriptional regulator n=1 Tax=Symbiobacterium thermophilum RepID=Q67PU0_SYMTH Length = 299 Score = 225 bits (575), Expect = 2e-57, Method: Composition-based stats. Identities = 40/314 (12%), Positives = 94/314 (29%), Gaps = 21/314 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 + L L+ +++ +A + ++ AV++ +A L A PL S + TP Sbjct: 1 MLLQHLITFCRVVETGGFARAGALVGLSQPAVTRQVAALEAELGTPLLDRSGRQIHLTPA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQT-PRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + + N L ++ P + + A + + + +L + + +P Sbjct: 61 GRLVYERARRIITAVNTLKEEVADLAHPERGRIAIGAVTTVGLRLLPPILAAFKREHPGI 120 Query: 127 TIKLR-NWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + ++ + +++ + GE+++ + L D + Sbjct: 121 RVHVKADRTQETIQRLLEGEIELAILPTPV----------THPRLRSVPLVEDPVVLVCA 170 Query: 186 KDHP-ALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 L L IS +D +L++ G + M E M Sbjct: 171 PGRRSELPDPLPLAKLGEIDLISFQAPSRFRTFVDAMLEQAGVYPNVTMEFDSHEAVTLM 230 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLL-WHKRNSHNPK 303 A P + + ++ +L H +P Sbjct: 231 VEA--GFGCALVPASAVERELALGTVVR-----VEVEGMPRMARTTSLAFRHPNPGWSPA 283 Query: 304 IVWLRETIKNLYAS 317 L + I + + Sbjct: 284 TERLFQMIVDFFRQ 297 >UniRef50_Q12BP5 Transcriptional regulator, LysR family n=1 Tax=Polaromonas sp. JS666 RepID=Q12BP5_POLSJ Length = 319 Score = 225 bits (575), Expect = 2e-57, Method: Composition-based stats. Identities = 49/331 (14%), Positives = 100/331 (30%), Gaps = 34/331 (10%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L + +L E S T+AA+R++V+ +S +A L A LF + ++ + Sbjct: 1 MELRQIRYFTVLADELSFTRAARRLHVSQPPLSFQIASLEAELGARLFNRTSRSVALSEA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQT-PRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + + + ++ + +Q + P Sbjct: 61 GKAFLPHAQAVLARLEEARGHVQRVASGLQGRVQVGLAGSHFLGPFPQFIQQFRLQRPAV 120 Query: 127 TIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 I L D L A+ G +D+ S I +L+ D V L Sbjct: 121 EIALHEMKPSDHLQALRDGRLDLCVSRNPLEDAQ----------ISAALLWRDPVVVALP 170 Query: 186 KDHPALHQ-TWNLDTFLRYPHISICWEQS-DTWALDNVLQELGRERTIAMSLPEFEQSLF 243 H + L + + + S L + G IA + E +L Sbjct: 171 PGHRLAARSRLRLAELKDEEFVFLRLDSSPFAARLFEACVQAGFAPHIAQQVVEVPAALN 230 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQK----------------KLE 287 + A L +A P + + + +L + Q + Sbjct: 231 LVAA--GLGVALVPASLAQL-RADAVGICSLSPSMPKRAQAEGKAKMTGGLNGNAPGAIN 287 Query: 288 VPFTLLWHKRNSHNPKIVWLRETIKNLYASM 318 +LW + P + R + + ++ Sbjct: 288 GDVYVLWRRE-DAAPAVATFRTQLLDWARAL 317 >UniRef50_B1Y3F3 Transcriptional regulator, LysR family n=2 Tax=Burkholderiales RepID=B1Y3F3_LEPCP Length = 314 Score = 225 bits (575), Expect = 2e-57, Method: Composition-based stats. Identities = 41/329 (12%), Positives = 89/329 (27%), Gaps = 34/329 (10%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 + +L L + + S ++AA+++ ++ AVS L +L LF P Sbjct: 1 MKDFNLRHLRIFETIASCGSFSRAAEQLGMSQPAVSMQLRQLETDLGTLLFER-PQRQRL 59 Query: 65 TPLMVSMEQNLAEWMQMSNLLLDKPH------------HQTPRGLKFELAAESPLMMIML 112 T + Q+ + D L S Sbjct: 60 TDAGQDLLQHARVILAQVRATEDAMAVHEAEASGASAAGARGPRGLLHLGVVST-AHYFA 118 Query: 113 NALSKQIYQRYPQATIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAID 171 L + ++R+P+ +KL + L + +DI +G ++ Sbjct: 119 PRLLSEFHRRHPEVRLKLTVAKRSEVLAMLQEHRLDIAITGYPPSEA----------DLE 168 Query: 172 YEVLFSDVPCVWLRKDHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERT 230 C+ H + I + L+++LQ + Sbjct: 169 AASFARHPHCIVAHPGHALARRRGLAWADLRDEEFIFREGGSATRQFLEHLLQSQSIQIK 228 Query: 231 IAMSLPEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPF 290 M L E + ++ + L + + Q + + Sbjct: 229 RGMELAGNETIKQAVMC--GMGISFLSAHTFQVELGAGL------MAVLDVQGMPKLIDW 280 Query: 291 TLLWHKRNSHNPKIVWLRETIKNLYASMA 319 + + R+ + A++A Sbjct: 281 CFVQRRDTLLTGANAAFRQFVFEEGATLA 309 >UniRef50_B0MW77 Putative uncharacterized protein n=1 Tax=Alistipes putredinis DSM 17216 RepID=B0MW77_9BACT Length = 297 Score = 225 bits (574), Expect = 2e-57, Method: Composition-based stats. Identities = 36/314 (11%), Positives = 89/314 (28%), Gaps = 22/314 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 + + L L + S + AA+ VT ++S + L L S + PT Sbjct: 1 MTIIQLEYLLAVANCGSFSLAAEHCFVTQPSLSMQIKSLEEELGVVLLDRSKKPVIPTEA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + E ++ + + + + L + +L+ + YP+ Sbjct: 61 GEVVLAEIRETLRAYDHIREAVAELKGETSGRLRLGVIPTIAPYLLHKFIPDFVRDYPKV 120 Query: 127 TIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 +++ D +DA+ R +D + I LF D +++ Sbjct: 121 ELEIAEMVTADIVDALRRDRIDAALVAG----------GTCGEGIQEHELFDDRFHLYVS 170 Query: 186 KDHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRER-TIAMSLPEFEQSLF 243 +++P +T ++ + + + + Q + + Sbjct: 171 RENPLFERTNVRIEDIDLKELVLLSPGHCMRDQIIELCQAKREVPSHYTFESGSLDTLMR 230 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 + + P Y + + + + Sbjct: 231 IVDYTHC--VTIIPEMAVEYIPAEH------RCQVKTLAKGATSRKIAVAVRRTYVKSSI 282 Query: 304 IVWLRETIKNLYAS 317 I L +TI + + Sbjct: 283 IKALIDTILSKVSR 296 >UniRef50_UPI0001C42298 LysR family transcriptional regulator n=1 Tax=Bacillus pseudofirmus OF4 RepID=UPI0001C42298 Length = 291 Score = 225 bits (574), Expect = 2e-57, Method: Composition-based stats. Identities = 37/309 (11%), Positives = 89/309 (28%), Gaps = 26/309 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +D+ L ++ E +T AA+++N+ +S+S+ K+ L V L T Sbjct: 1 MDMRQLRYFVTVVDEGQITLAAQKLNMAQPPLSQSIKKMEHEIGAKLLVRHGRKLEVTEA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHH-QTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + + + L L + L + ++ YPQ Sbjct: 61 GEVLYSKGLQLLNTFDETLGAVRETGEGMRGTLSLGCVMTCIHQ-LPERVQTFHRLYPQV 119 Query: 127 TIKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 +K+ D L + + ++++ H ++ + +D + Sbjct: 120 KLKILGGDPHQLSELVESRDIELAIVRSPLHY----------KNVNMIEIANDPFVFIVP 169 Query: 186 KDHPALH--QTWNLDTFLRYPHISICW--EQSDTWALDNVLQELGRERTIAMSLPEFEQS 241 K + + ++ YP I++ + + + G + P+ Sbjct: 170 KSWTDVSSLSSITMNQISEYPLIALHRVNGIGIYEIILDEFRRHGIKPKYICESPDATIL 229 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 L + + P + L + ++W K + Sbjct: 230 LSIVKA--GIGAILLPESAL-------FNFTSKDLATIKIDDFSATTQTCVIWQKDRYIS 280 Query: 302 PKIVWLRET 310 E Sbjct: 281 KAARKFIEL 289 >UniRef50_D1A8L0 Transcriptional regulator, LysR family n=2 Tax=Actinomycetales RepID=D1A8L0_THECD Length = 350 Score = 225 bits (574), Expect = 2e-57, Method: Composition-based stats. Identities = 42/347 (12%), Positives = 91/347 (26%), Gaps = 48/347 (13%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 + L L + + R T AA+ + V ++SK + L LF + ++ TP Sbjct: 1 MQLQQLAYFVAVAEIRHFTHAAEALRVAQPSLSKQIRALETELGASLFSRARGNITLTPA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 ++ + + + + L A L +L + ++ + YP Sbjct: 61 GEALLPLAKRILADVDTARLEVQELVGLRRGRVRLGATPSLCAGLLADVLRRFHDTYPGI 120 Query: 127 TIKLRN-WDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + + D + +TRG +D+ + ++ + + V Sbjct: 121 QLLVEEGGSRDLVRQLTRGALDLALVILPLAGDAP---------LETTAILREHLVVASP 171 Query: 186 K------------DHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIA 232 + ++ P + A ++ G E A Sbjct: 172 APRRNGSRPPAVRGALLPRRPYVRIEDLRDRPLVMFRPGYDLREATIGACRQAGFEPRFA 231 Query: 233 MSLPEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQ--------- 283 + E + L L +A P L L + + Sbjct: 232 VEGGEMDAVLRFVEA--GLGVAVVPSMV--LAGRPGLRGTPLAIGDPPEESGGRGSAGAP 287 Query: 284 -----------KKLEVPFTLLWHKRNSHNPKIVWLRETIKNLYASMA 319 L L K + + +++ A Sbjct: 288 GAGSSRRTEPVPGLLRTIALAHRKDVTLTHAARAFQRVLESFIREAA 334 >UniRef50_Q65FY0 Probable transcriptional regulator YwqM n=1 Tax=Bacillus licheniformis ATCC 14580 RepID=Q65FY0_BACLD Length = 297 Score = 225 bits (574), Expect = 2e-57, Method: Composition-based stats. Identities = 44/314 (14%), Positives = 97/314 (30%), Gaps = 25/314 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +++ L + ++ T+AA + S V+ + + PLF + T Sbjct: 1 MEIRHLKTFKTIVDIGGFTRAADYLGYAQSTVTSHVQAIEQELRKPLFYRLGKKMMLTEA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQAT 127 + AE +++ P + + A L + L A+ + +YPQ T Sbjct: 61 GKHLLPYAAEMVELYEKARHIPENDQEPSGNLIIGASESLTVYRLPAILHEFTSKYPQVT 120 Query: 128 IKLRNWD-YDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRK 186 + L++ + D + +G++D+ F + E L ++ K Sbjct: 121 VTLKSSTCWQLRDELKQGKIDVAFL---------LDNDRKENDLHVEKLVNEPMVFIFPK 171 Query: 187 DHPALHQTWNLDTF---LRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 +HPA + LD + S + L++ G M E Sbjct: 172 EHPAGQKA--LDDLTFNANETFLYTEHGCSYRDFFEEYLRQRGVIADHTMEFWSVEAIKQ 229 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 L ++ P + + + +++HK +P Sbjct: 230 CVMC--GLGVSLLPLITTRTDIEEG--------KLQGTLVRDALFSTQMVYHKNKWLSPA 279 Query: 304 IVWLRETIKNLYAS 317 + + ++ Sbjct: 280 MAAFTDIVRRKARE 293 >UniRef50_Q48IW5 Transcriptional regulator, LysR family n=8 Tax=Pseudomonas RepID=Q48IW5_PSE14 Length = 299 Score = 225 bits (574), Expect = 2e-57, Method: Composition-based stats. Identities = 41/314 (13%), Positives = 91/314 (28%), Gaps = 25/314 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +L+ L C + E + +AA+R+N+T +S+ + + LF S ++ T Sbjct: 2 FELSQLRCFTTVATELNFRRAAERLNMTQPPLSRQIQIMEHNLGVELFTRSTRSVALTAA 61 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + ++ + ++ + L + + + PQ Sbjct: 62 GRAFFIEAQTLLERAQQAAISARRFAEGDIGSVTISFVGSAVYEFLPRVIAEARLKQPQV 121 Query: 127 TIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 I L + +A+ +D+G + E L + + + Sbjct: 122 KISLTEMNTYQQHEALRARRIDLGIVRAP----------LFQPGYESECLVREPFVLAVP 171 Query: 186 KDHPALH-QTWNLDTFLRYPHISICWE--QSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 +H H + + P + L + + L L Sbjct: 172 GNHRLAHADSVTVADLEGAPFLMYSHSAYPPFNELLTGMFRSARVAPEYVQWLGSSLTIL 231 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 + + LA PR +V + + ++ L+W N + P Sbjct: 232 ALVNA--GMGLALVPRCATNVVFKD---VVFRDIDL----GEGVQSELHLVWRADNDN-P 281 Query: 303 KIVWLRETIKNLYA 316 L + I+ Sbjct: 282 ACRMLLKAIRAAVR 295 >UniRef50_B2JSH4 Transcriptional regulator, LysR family n=2 Tax=Burkholderiaceae RepID=B2JSH4_BURP8 Length = 309 Score = 225 bits (574), Expect = 2e-57, Method: Composition-based stats. Identities = 59/315 (18%), Positives = 112/315 (35%), Gaps = 20/315 (6%) Query: 4 SITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLS 63 + DLNLL L + + KAA+ + ++ A S +L +LR D LFV + G+ Sbjct: 7 HMDNFDLNLLRIFDALWRHGHLGKAAEELTLSQPAASYALKRLREELGDVLFVKTGSGMQ 66 Query: 64 PTPLMVSMEQNLAEWMQMSNL--LLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQ 121 PTP + + + + L F +A M+ L L +++ Sbjct: 67 PTPRAILLAPVVQSVLADIRERVLKAPNFVPDKAQRTFTIALSDVGEMVSLPRLLQRVTS 126 Query: 122 RYPQATIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 P + ++ L ++ R EVD+ + + L Sbjct: 127 LAPSVNVTTVSFAPKQLLSSLQRSEVDLAIGYFPDLDGV---------DVFQQHLVRHSF 177 Query: 181 CVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQ 240 +R++HPA+ F PH + E ++ L+E G R + P F Sbjct: 178 VCLVRQNHPAVQGRLTKKLFCELPHAVVQVEGRRQEIVEQFLKENGIRRREVLHTPHFLS 237 Query: 241 SLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 A D + + + + + ++ +L ++ P WH+ Sbjct: 238 IPMTIAMTDLV-VTVSSDVGEIFARIAELEILDPPYKMP-------RFDVNQYWHRSQHD 289 Query: 301 NPKIVWLRETIKNLY 315 +P W+R ++ L+ Sbjct: 290 DPGNRWMRGLVRELF 304 >UniRef50_Q67MJ1 LysR family transcriptional regulator n=1 Tax=Symbiobacterium thermophilum RepID=Q67MJ1_SYMTH Length = 273 Score = 225 bits (574), Expect = 2e-57, Method: Composition-based stats. Identities = 42/288 (14%), Positives = 75/288 (26%), Gaps = 26/288 (9%) Query: 34 VTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQT 93 V ++S+ + +L LF S + T ++ + ++ + Sbjct: 2 VAQPSLSQQIRRLEEELGVLLFDRSRTPVRLTDAGEALLPHAEAILRQVEAAGAAVEERI 61 Query: 94 PRG-LKFELAAESPLMMIMLNALSKQIYQRYPQATIKLRNWDYDSLDAI-TRGEVDIGFS 151 + L + +L QRYP I LR L + E D+ + Sbjct: 62 GLRSGRLVLGSLPVTGSRLLPRAITAYRQRYPGVQITLREEPTQRLTELALADETDLTLT 121 Query: 152 GRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPALHQ-----TWNLDTFLRYPHI 206 +D++ L ++ + L DHP L P + Sbjct: 122 TLPVGS----------DELDWQPLLTEPILLALPPDHPLAADGPPHPAIPLSAVAGEPFL 171 Query: 207 SICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQPDNLLLATAPRYCQYYNQL 266 + + Q G IA + E M A L + P+ + Sbjct: 172 IMKPGYGFRDLVLAACQAAGFSPQIAFESAQIETLQAMVAA--GLGVTLVPQMAADRSLR 229 Query: 267 HQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWLRETIKNL 314 V L L L W + + L Sbjct: 230 PSPVFVPL-------AGAPLTRTLALAWRRDRPLPRSAQAFLKLASEL 270 >UniRef50_D0D0K4 Transcriptional regulator n=1 Tax=Citreicella sp. SE45 RepID=D0D0K4_9RHOB Length = 300 Score = 225 bits (574), Expect = 2e-57, Method: Composition-based stats. Identities = 46/305 (15%), Positives = 98/305 (32%), Gaps = 19/305 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 L L + + +V+ AA+ + ++ SAV++++ +L A LF P GL T Sbjct: 3 FTLRQLRYFLAVAESGTVSGAAQALAISQSAVTEAIRELEADLGVQLFERHPRGLDITQK 62 Query: 68 MVSMEQNLAEWMQMSNLLLDKPH-HQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 ++ + + K + S + +L+ + + + P Sbjct: 63 GHQFLRHATGILGSVSDARLSLSKDPDRLRGKLHVGVTSLVAGYVLSDILSRFRRANPGV 122 Query: 127 TIKLRNWDYDSLDAIT-RGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + + L+ + GE+D +A+ E++ + +WL Sbjct: 123 EVTALEDSGEYLEHLLIGGELDAAVM--------VTTNMRDRMALQTEIIDTSPYQLWLP 174 Query: 186 KDHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 H +T +++ + P I + + A +L G +A E + Sbjct: 175 NGHELSTRTSVSIEDLVDEPIIMLRVD-EIEEATRRLLSAFGARPRVAFRTRSVEAVRSL 233 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 A +A P L +V+ + V ++W K +P Sbjct: 234 VAT--GAGIAILPELVYRRWSLEGDRIVSRDV-----SGSLPVVQVGVVWRKGAPLSPAT 286 Query: 305 VWLRE 309 Sbjct: 287 REFIR 291 >UniRef50_A8GG55 Transcriptional regulator, LysR family n=1 Tax=Serratia proteamaculans 568 RepID=A8GG55_SERP5 Length = 310 Score = 225 bits (574), Expect = 2e-57, Method: Composition-based stats. Identities = 76/319 (23%), Positives = 135/319 (42%), Gaps = 23/319 (7%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 +++ +DLNLL+ + L Q R+VT A +R+N +VS +LA+LR FDDPLFV S G+ Sbjct: 1 MNLSNVDLNLLVVFEALYQTRNVTVAGQRLNRAQPSVSNALARLRTLFDDPLFVRSGGGM 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG---LKFELAAESPLMMIMLNALSKQI 119 PT + + ++ + L P P +F LAA + +L + ++ Sbjct: 61 LPTARAHQLMLQIQPVLEQIHQALTPPTRFDPATASQRRFRLAAGDYADITLLPTIISRL 120 Query: 120 YQRYPQATIKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSD 178 Q P I++ D + + RGE+D+ G +P + + LF++ Sbjct: 121 RQAAPGIDIRVSRLDRRTVVQQLERGEIDVALGGHL----------EVPEGMLVQPLFNE 170 Query: 179 VPCVWLRKDHP-ALHQTWNLDTFLRYPHISICW--EQSDTWALDNVLQELGRERTIAMSL 235 + HP ++WNL ++ PH + S +D L E+G ER +A + Sbjct: 171 SFTCIASRHHPQIAAESWNLQQYIGLPHALYAPSDDGSARGIIDQRLTEMGLERRVAATF 230 Query: 236 PEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWH 295 + A D + A + + ++ + LP P + Sbjct: 231 SHIIALPAVVAGSDLIA-TLATSVARQFADPSRIQFLPLPSEL-----AMPAFPIECVAG 284 Query: 296 KRNSHNPKIVWLRETIKNL 314 ++ +P + WL +T+ L Sbjct: 285 RQVKRDPALAWLCDTLSQL 303 >UniRef50_Q47V66 Substrate-binding transcriptional regulator, LysR family n=2 Tax=Gammaproteobacteria RepID=Q47V66_COLP3 Length = 293 Score = 225 bits (574), Expect = 2e-57, Method: Composition-based stats. Identities = 43/315 (13%), Positives = 93/315 (29%), Gaps = 25/315 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L L + T+AA +I + A++ ++ KL L + T Sbjct: 1 MNLKRLEYFCQLAVLGNFTRAAHKIGIAQPALTIAIQKLEQEVGLKLINRAEKNALLTAE 60 Query: 68 MVSMEQNLAEWMQMS-NLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + + + + L L+ + + + + Q+YP+ Sbjct: 61 GEVLYKLATQLLSQAKQLELELEELKDLEQGTIRFGVSAMMGSYYFPKVLATFKQKYPKI 120 Query: 127 TIKLRN-WDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + L + + GE+D+ +S + Y LF++ + Sbjct: 121 KMHLVDQGTAALEKMLLNGELDLALVRSDSENPQ----------LRYTELFNEEVVAAMA 170 Query: 186 KDHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 HP Q+ +L F + P + + ++ I M E + Sbjct: 171 SSHPLANEQSISLAQFCQQPLVLFHEGYFLREVISQYSKKNHLALDIRMETNLIELQKSL 230 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 + R Q Q+ + K+E +L W K + + Sbjct: 231 VRSEVGI-TTCLSRILQNEQQM-----------TSTPFEPKIEFKLSLAWKKNHYLSKAS 278 Query: 305 VWLRETIKNLYASMA 319 + + M Sbjct: 279 KAFMTHLSSTLDPMG 293 >UniRef50_Q31JM2 Transcriptional regulator, LysR family n=1 Tax=Thiomicrospira crunogena XCL-2 RepID=Q31JM2_THICR Length = 304 Score = 225 bits (574), Expect = 2e-57, Method: Composition-based stats. Identities = 41/315 (13%), Positives = 97/315 (30%), Gaps = 28/315 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 + LN L L E+ KA+++ V+ +S ++ KL + LF + TP+ Sbjct: 1 MTLNELKYCVELANEKHFRKASEKCFVSQPTLSIAIKKLEEELNVTLFERRKNEVIVTPV 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQAT 127 + E +Q + + D + + + ++ + +L +L + +Q+ Sbjct: 61 GKQVVDLAKEIIQKTQTIKDISKDEQSQTTELKIGVIYTIGPYLLPSLITKFHQKANNIR 120 Query: 128 IKLRNWDYDSLD-AITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRK 186 + + L + GE+DI I+ ++ + + K Sbjct: 121 LSIEENYTHILSKKLQSGELDIIIVSLPFDEP----------NIETFSVYDEEFVAAIPK 170 Query: 187 DHPALH-QTWNLDTFLRYPHISICWEQSDTWALDNV------LQELGRERTIAMSLPEFE 239 +H LD + + + L + E Sbjct: 171 NHSLSKMTEIALDDVKNETVLLLGAGHCFRDQVLEAYPNLIHLHAKDNPLQKTLEGSSLE 230 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 +M A + P + L + ++ K + + W K Sbjct: 231 TIRYMVAS--GAGITVLPCSACQNAEDL--------LVYRPLKEPKPKRTVVMAWRKSFP 280 Query: 300 HNPKIVWLRETIKNL 314 + ++T++++ Sbjct: 281 RQKVLQVFKDTLQSI 295 >UniRef50_Q06610 RuBisCO operon transcriptional regulator n=4 Tax=Proteobacteria RepID=RBCR_THIFE Length = 309 Score = 225 bits (574), Expect = 2e-57, Method: Composition-based stats. Identities = 44/317 (13%), Positives = 89/317 (28%), Gaps = 22/317 (6%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 SI L+ L + + S +AA+ +++TP A+S + +L PLF + Sbjct: 1 MSIRHATLHQLKIFAAVARHMSFARAAEELHLTPPALSIQVRQLAEAVGQPLFDQIGKKI 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNALSKQIYQ 121 T ++ + + + ++A S + + Sbjct: 61 YLTAAGEALTSACHDILDRLEYFTQEIAALQGLEKGSLKVATLSTT-KYFIPRMLGGFCT 119 Query: 122 RYPQATIKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 +P L + + L+ + R + D+ G+ + + E + Sbjct: 120 EHPGVATVLFIGNREVLLERLARNQDDLYILGQPPE----------HMNVVAEAFADNPL 169 Query: 181 CVWLRKDHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFE 239 V R DHP + P I A + ++ G M E Sbjct: 170 VVVARLDHPLTQEKDIEPSRLRDVPFILREPGSGTRLAAEKFFEQHGVILKTRMEFGSNE 229 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 A L + L + + LE + ++ Sbjct: 230 AVKQSVAG--GLGITVLSASTIRAELASG------KLAILDVRGFPLERKWYAVYPAGKR 281 Query: 300 HNPKIVWLRETIKNLYA 316 +P+ E + A Sbjct: 282 ISPRTKAFMEYLFAASA 298 >UniRef50_A9B4C8 Transcriptional regulator, LysR family n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9B4C8_HERA2 Length = 302 Score = 225 bits (574), Expect = 2e-57, Method: Composition-based stats. Identities = 41/306 (13%), Positives = 94/306 (30%), Gaps = 22/306 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++++ LL + + ++AA+R V+ ++S+ + KL LF + T Sbjct: 1 MEIHQLLYFVAVAETGGFSRAAQRCAVSQPSLSQQIIKLEHELGQALFERLGRTIRLTTA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHH-QTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 ++ + + + + + L +S+ +P+ Sbjct: 61 GQALLPQAQQLLTQWRSIKQHVSDSVEQHACRLAIGIIPTLAPRFFPNVSQAFQHHFPRT 120 Query: 127 TIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 T+ + L + +D+ + I E LF +V V L Sbjct: 121 TLSIVEHTTSQLLIQLIEYSLDLLIASGPIEHPL----------IQIEPLFDEVLLVALP 170 Query: 186 KDHPALHQTW-NLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 DH ++ L+ P +++ + + +D E E + + Sbjct: 171 HDHQYAQRSVLQLNDLYHMPLLALHDDHCLSQQVDAFCYEQYLEPQVVGRVTNLTTIQRC 230 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 A L +A P+ + L + + WH + + + Sbjct: 231 VAA--GLGMAFVPQSLTQAEPHPNVVYRRL-------LDAQPQRKIIAAWHHQRPPSSSV 281 Query: 305 VWLRET 310 + L T Sbjct: 282 LDLLRT 287 >UniRef50_Q0A8N9 Transcriptional regulator, LysR family n=4 Tax=Gammaproteobacteria RepID=Q0A8N9_ALHEH Length = 336 Score = 225 bits (574), Expect = 2e-57, Method: Composition-based stats. Identities = 53/307 (17%), Positives = 109/307 (35%), Gaps = 25/307 (8%) Query: 10 LNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMV 69 L L QE S+++AA+R+ ++ +VS + L LF + TP Sbjct: 14 LKQLRAFCHAAQEGSISRAAQRLELSQPSVSLQIQALERELGIALFERRGPRIRLTPDGE 73 Query: 70 SMEQNLAEWMQMSNLLLD--KPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQAT 127 ++ + ++ + L + HQ + + ++AA + +L L KQ RYP Sbjct: 74 TLYELAQPLVEGVDALPERFAARHQRLQTGRLDIAAGESTTLYILPDLLKQFMARYPGVH 133 Query: 128 IKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRK 186 +KL N D + A+ EVD+ LP + Y +++ + L Sbjct: 134 VKLHNLIGRDMISALQHDEVDLAVGSTL----------DLPEDLSYRAIYTYDLRLILPL 183 Query: 187 DHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMA 245 HP ++ L I + ++ V Q+ + + + +E Sbjct: 184 GHPLAEKSELTLADLASGELILPPRHLTTWRLVNLVFQQHNIPYRVRLEVGGWEIIKRYV 243 Query: 246 AQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIV 305 + +A + +L + +LP F + + ++ + +P+ Sbjct: 244 ELGFGIGIA----SSICLSGSERLHVRSLPEVFP-------QRTYGVMLRRGRYLSPQAK 292 Query: 306 WLRETIK 312 E + Sbjct: 293 RFLEVMA 299 >UniRef50_Q1R0T8 Transcriptional regulator, LysR family n=9 Tax=Gammaproteobacteria RepID=Q1R0T8_CHRSD Length = 308 Score = 224 bits (573), Expect = 2e-57, Method: Composition-based stats. Identities = 67/316 (21%), Positives = 122/316 (38%), Gaps = 22/316 (6%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 + +DLNL+ L + SVT AA ++NVT +VS SL++LR FDDPLF + G++P Sbjct: 1 MRPIDLNLVRTFVTLYESGSVTLAAHKLNVTQPSVSYSLSRLRELFDDPLFSRTRDGMAP 60 Query: 65 TPLMVSMEQNLAEWMQMSNLLLDKPHHQTPR--GLKFELAAESPLMMIMLNALSKQIYQR 122 T + + + + + L H P +F LA +L + + + Sbjct: 61 TFCAMRLYTSFRQALTQIEQTLSDAQHFDPEQSQRRFRLALTDLGETTLLAPILRHMRDL 120 Query: 123 YPQATIKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPC 181 P +++ + D + VD R+ S + + + Sbjct: 121 APGVELEVVPLEIDKVVSWFDNKSVDAVICSRDIQAPS----------LGRRPIIEERYV 170 Query: 182 VWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQS 241 L + HP + QT +++ F R H+ + +++VL+E R +++ +P F Sbjct: 171 GLLGRRHPRIGQTLSMEAFSREDHVQVSPTTG-HGLVEDVLKERDITRKVSVVVPHFSAL 229 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 + L + + + Q L V LP V L W ++ + Sbjct: 230 PRLLESTSLLAI-LPEQIAGLFTQQADLKQVELPFDIP-------PVEVALYWSRQVDDS 281 Query: 302 PKIVWLRETIKNLYAS 317 W R T+ + Sbjct: 282 AAQEWFRRTLIEATSR 297 >UniRef50_C7I0K1 Transcriptional regulator, LysR family n=1 Tax=Thiomonas intermedia K12 RepID=C7I0K1_THIIN Length = 319 Score = 224 bits (573), Expect = 3e-57, Method: Composition-based stats. Identities = 39/313 (12%), Positives = 85/313 (27%), Gaps = 22/313 (7%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 + + L + KAA+ +++TP AVS + +L + PLF +S Sbjct: 1 MKNATIRQLRVFSAAARHLHFGKAAQEMHLTPPAVSMQIRELESQVGLPLFERQGKSVSL 60 Query: 65 TPLMVSMEQNLAEWMQMSNLLLDKPHHQTP-RGLKFELAAESPLMMIMLNALSKQIYQRY 123 T + + + D + + + S + L + + Y Sbjct: 61 TLTGEYLVVYARKVLATLKDAEDAMARLRGIKAGRLTIGMVST-AQYFVPRLLARFHAEY 119 Query: 124 PQATIKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCV 182 P ++L + + L + E+D+ GR + E + + Sbjct: 120 PHVEVRLSVGNREQLVSHLQNSELDLAIMGRPPRDVAT----------RAEPFAAHPMGI 169 Query: 183 WLRKDHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQS 241 HP + ++ I + L + E + + E Sbjct: 170 IAPPQHPLSTGGPHSATLLTQFNFIIREPGSGTRATFEEYLHQHQMELPLFTEMQSNETI 229 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 + ++ + + L L + L + + + Sbjct: 230 KQAVMAN--MGISFLSLHTIDLELRNNL------LTVPSIEGMPLLRRWYAVNSLAKLLS 281 Query: 302 PKIVWLRETIKNL 314 P R I Sbjct: 282 PGAEAFRYFILEH 294 >UniRef50_B0C7Y6 Transcriptional regulator, LysR family n=1 Tax=Acaryochloris marina MBIC11017 RepID=B0C7Y6_ACAM1 Length = 305 Score = 224 bits (573), Expect = 3e-57, Method: Composition-based stats. Identities = 74/320 (23%), Positives = 133/320 (41%), Gaps = 23/320 (7%) Query: 1 MKKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPL 60 M +DLNLL + +M E +V++AA+R+N+T AVS +L +LR +D LF+ P Sbjct: 1 MHN---QIDLNLLHIFEAVMMELNVSRAAERLNMTQPAVSHALRRLRRITNDELFLKVPS 57 Query: 61 GLSPTPLMVSMEQNLAEWMQMSNLLLDKP-HHQTPRGLKFELAAESPLMMIMLNALSKQI 119 G+SPTP + + + E + L L P F LA + + L L + Sbjct: 58 GVSPTPKALELWGPIREGLVHIRLALSPPSFEPFSSMQTFTLAMADYSVALFLPKLLPIL 117 Query: 120 YQRYPQATIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSD 178 P I++ ++ + + E+D+ + + + D Sbjct: 118 AHSAPNINIRIVPNTNINAAKLLEQSEIDLAMGRFYRSTV----------RLRVQEIIGD 167 Query: 179 VPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEF 238 +RKDHP H+ L +++ H+ + T +D L+E+ R IA+++ +F Sbjct: 168 RYICIMRKDHPLAHKRLTLKQYIKADHLLVTLTGEATGLVDKQLREMDLSRRIALTVNQF 227 Query: 239 EQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRN 298 + A D + A R + L + LPL + ++WH+R+ Sbjct: 228 TLVPELIAGSDLIS-AIPLRMVERNPFRTDLHITELPLKIAPAF-------LQMMWHERS 279 Query: 299 SHNPKIVWLRETIKNLYASM 318 +P WLR + + + Sbjct: 280 QVDPAHEWLRSQLFEIVQDL 299 >UniRef50_A1U1I0 Transcriptional regulator, LysR family n=67 Tax=Proteobacteria RepID=A1U1I0_MARAV Length = 336 Score = 224 bits (573), Expect = 3e-57, Method: Composition-based stats. Identities = 67/323 (20%), Positives = 126/323 (39%), Gaps = 32/323 (9%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 I+ +DLNLL+ L +L++ER+VTKAA + +T A+S L +LR F DPL V + G+ Sbjct: 1 MDISRVDLNLLVYLDVLLRERNVTKAANHLGITQPAMSNGLRRLRDLFGDPLLVRTSEGM 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDK--PHHQTPRGLKFELAAESPLMMIMLNALSKQIY 120 + T ++ + + + + P F + A ++ + ++I Sbjct: 61 TATERARELQPLVRGILSDIEQAVQEKTPFAAGESQRVFRIMASDYAESCLMPRVLRRIR 120 Query: 121 QRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 Q P T+ + S + +G +D+ + +P + + L+++ Sbjct: 121 QEAPHVTLDVLTPSDVSFLDVEQGRLDMAINR----------FDKIPQSFHQKTLWTEYF 170 Query: 181 CVWLRKDHPALHQTWNLDTFLRYPHISICW-EQSDT-----------WALDNVLQELGRE 228 + +P L + + LDT+L HI + +D L +GR+ Sbjct: 171 ACLMNARNPILKEPFTLDTYLDASHIWVSKTGFGVGVGVNPKDVQRLGWVDEALGRMGRK 230 Query: 229 RTIAMSLPEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEV 288 R I++ ++ ++ +A Q D + R L + P Sbjct: 231 RQISVFTRHYQVAMLLAEQHDLIA-TLPSRAAWLQKDNPNLVVKVPPFEIP-------PF 282 Query: 289 PFTLLWHKRNSHNPKIVWLRETI 311 + W HN WLR+ I Sbjct: 283 ELKMAWSPLLQHNSDHQWLRKLI 305 >UniRef50_A9FW21 Transcriptional regulator, LysR family n=2 Tax=Myxococcales RepID=A9FW21_SORC5 Length = 333 Score = 224 bits (573), Expect = 3e-57, Method: Composition-based stats. Identities = 79/309 (25%), Positives = 130/309 (42%), Gaps = 18/309 (5%) Query: 4 SITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLS 63 I +++LNLL L+ L+ E SV+ AA+R +V+ SA+S SLA+LR F DPL V GL+ Sbjct: 21 DIRSINLNLLPALEALLVEGSVSGAARRAHVSQSAMSHSLARLRELFGDPLLVPLGRGLT 80 Query: 64 PTPLMVSMEQNLAEWMQMSNLLLD--KPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQ 121 PTP + + L + L +P F +A + L + + + Sbjct: 81 PTPRALQLRAALPAAFEHLRRALASPEPFDPRTSARTFRVATIDYFELTTLPDVLDHLGE 140 Query: 122 RYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPC 181 P +++ + D A+ G++D+ + L+ D Sbjct: 141 HAPFVRLEIERFSPDVTPALVLGDIDLAL--------FGASQPVPAAGLRRAPLYQDPFA 192 Query: 182 VWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQS 241 V RK HPA+ + +LDT++ H+ + E A+D L LG+ R +A+ LP F + Sbjct: 193 VMARKGHPAIKRRLDLDTYVALGHVLVSVEGHRGGAVDRALARLGKTRRVALRLPHFMSA 252 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 D LL Q +L L + A P + +W +R+ + Sbjct: 253 PLAVRSSD-LLCTIPSSVAQRARELFGLRVFAPPFELPAA-------QVVAVWSQRHDDD 304 Query: 302 PKIVWLRET 310 P W R+ Sbjct: 305 PAQRWFRDL 313 >UniRef50_C7JCS7 Transcriptional regulator LysR n=11 Tax=Proteobacteria RepID=C7JCS7_ACEP3 Length = 313 Score = 224 bits (573), Expect = 3e-57, Method: Composition-based stats. Identities = 39/315 (12%), Positives = 90/315 (28%), Gaps = 26/315 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +D+ L + + S+T AA+ + + +S+ + +L LF G+ T + Sbjct: 1 MDIRHLRYFVTVAEHGSITHAAEALGIEQPPLSQQIRQLERNLGVTLFERQTRGMKLTEI 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQ-TPRGLKFELAAESPL-MMIMLNALSKQIYQRYPQ 125 + + + L + + ++ ++ ++ + P Sbjct: 61 GEVLLPRARTILDLQAQFLSTAEGLARGERGHIRVGLAGAVPLLPVIPLTIRRFREMAPD 120 Query: 126 ATIKLRN-WDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 T+ L A+ VDI P + L + + L Sbjct: 121 VTLSLEESNTPALCAALHEPSVDIAIIRPPFTD---------PSRLSVFHLLDEPTVIAL 171 Query: 185 RKDHPALHQT-WNLDTFLRYPHISICW--EQSDTWALDNVLQELGRERTIAMSLPEFEQS 241 + H + +LD P I A+ + Q G T+ P+ + Sbjct: 172 PRGHRLAKEPIISLDMVADDPLIIFPRELGPGFHDAILSAYQLAGVTPTMGQQAPQIAGT 231 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 + + A L ++ PR + + F + + + Sbjct: 232 VPLVAA--GLGVSVVPRSLSQIHAGG--------VTFHAISEPAPRATLAVAIRTGQNM- 280 Query: 302 PKIVWLRETIKNLYA 316 P + ++ Sbjct: 281 PLVTRFVTVLRTACR 295 >UniRef50_C0CT29 Putative uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0CT29_9CLOT Length = 304 Score = 224 bits (573), Expect = 3e-57, Method: Composition-based stats. Identities = 44/319 (13%), Positives = 102/319 (31%), Gaps = 29/319 (9%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++ L + + +E+S++KAA+++ VT A+S L +L + PLF+ GL PT Sbjct: 1 MNTRELEYILAIAKEKSISKAAEKLYVTQPALSLFLTRLESQLGTPLFIRGASGLIPTFA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNALSKQIYQRYPQA 126 Q + ++ + + + ++ + + +L + + YP Sbjct: 61 GERYIQMSQKVLKDYRDFEQELCDISSLHMGRLKVGTSAHIGSYVLPQVIPLFNRTYPNI 120 Query: 127 TIKLRNWDYDSLDAITRG-EVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + + + L+ + G E+D+ + +Y + + + Sbjct: 121 EVSISEGNSQVLEHMISGNELDVALMHLP----------LKHIEANYVEIARERYVMAFS 170 Query: 186 KDHPALHQ----------TWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSL 235 KDHP + + + Q D +L++ G I ++ Sbjct: 171 KDHPLNRKLSPREGETYPYIDPRAAAGQKFVLSFPYQRVRQISDRILEKAGITPDIILTT 230 Query: 236 PEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWH 295 + +L L + P P+ + F +++ Sbjct: 231 SSVQTALRF--AGVGLGVTFLPESYIQL-----FRCTHEPVFCYMDDDFEAYWTFVVVYP 283 Query: 296 KRNSHNPKIVWLRETIKNL 314 + + E K Sbjct: 284 GDVTLSGPARAFIELTKEA 302 >UniRef50_Q13T34 Transcriptional regulator, LysR family n=60 Tax=Proteobacteria RepID=Q13T34_BURXL Length = 334 Score = 224 bits (572), Expect = 3e-57, Method: Composition-based stats. Identities = 40/311 (12%), Positives = 89/311 (28%), Gaps = 23/311 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L +++++S T AA+++ VT +SK + L PL + + T Sbjct: 15 VELRALRYFVEVVRQQSFTVAAEQMFVTQPTISKMVKSLEDEIGSPLLLRDGRQMVLTDA 74 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + Q + + L + + + + + QRYP+ Sbjct: 75 GRIVYQRGQDVLAAHAQLQAELNDLDTLGRGQLTIGIPPMGGSLFTP-AIAAFRQRYPKI 133 Query: 127 TIKLRN-WDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 +KL A+ GE+++G L P I+ + + + R Sbjct: 134 ELKLFEQGSRAIEAALINGELELG----------GVLQPVDPENIEVLPVTRQLLWLVAR 183 Query: 186 KDHPALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 L P + + + N + G TI ++ + Sbjct: 184 TGSNWDDLHEVPLAQLANEPFVFYGESLALNDVVLNACRTAGFAPTIVGRSGHWDFMAAL 243 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 + +A P L + ++ + W + + Sbjct: 244 VLA--GVGIALLPAPYCR-------RLDPAKFTCRPVIEPEIPWEMAIGWRRNGYLSHAA 294 Query: 305 VWLRETIKNLY 315 + + Sbjct: 295 RAWLDVAREAL 305 >UniRef50_C0VZJ2 Oxidative stress transcriptional regulator n=1 Tax=Actinomyces coleocanis DSM 15436 RepID=C0VZJ2_9ACTO Length = 301 Score = 224 bits (572), Expect = 4e-57, Method: Composition-based stats. Identities = 47/297 (15%), Positives = 94/297 (31%), Gaps = 22/297 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +++ L +L+ ERS TKAA R V+ +S + KL L + G+ TP+ Sbjct: 1 MNIRDLRYFTVLVDERSFTKAAARCGVSQPTLSTQIRKLEEKIGATLVERASQGIIITPV 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQ-TPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + + + + + P F L L +L + +I + P Sbjct: 61 GQEILEYARSIIDKAEAIQNYADRAKDPHSGTFTLGMFPTLGPYLLPHIMHRIQKELPNI 120 Query: 127 TIKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 T++L + L + ++RGE+D G E + + LF + Sbjct: 121 TVRLVEEKSEILSEMLSRGELD-GIVLGEEPH---------DERLIVKHLFDEEFVFAST 170 Query: 186 KDHPAL--HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 DHP + ++ + + + + + F + Sbjct: 171 ADHPLANLDRPLTVEDLNGTELLLLTEGHCLRQQSLEICHTAQAK-QVDFRASSFPALRY 229 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 M A + + PR+ ++ L E Q + + Sbjct: 230 MVAS--GIGASLFPRFSVIPPIMN-----PETLKITEFAQPRPSRHIYFAMRASSPL 279 >UniRef50_C1DL37 LysR family transcriptional regulator protein n=2 Tax=Proteobacteria RepID=C1DL37_AZOVD Length = 312 Score = 224 bits (572), Expect = 4e-57, Method: Composition-based stats. Identities = 48/320 (15%), Positives = 100/320 (31%), Gaps = 28/320 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L ++ +E+ T+AA R+N+ +S+ + L LF+ P G+ T Sbjct: 1 MELRHLRYFVMVAEEKHFTRAAARLNMQQPPLSQQIRALEEELGFALFLRHPKGVELTAG 60 Query: 68 MVSMEQNLAEWMQMSNL-LLDKPHHQTPRGLKFELAAESPLMMI-MLNALSKQIYQRYPQ 125 + + + + L S ++ + ++ R+P Sbjct: 61 GEAFLREAQDILARVAQGASKAARVAQGIEGMLALGFTSSATSHPLIPRIIREYRARFPG 120 Query: 126 ATIKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 I L + +++T G +D+G P I++ L + + L Sbjct: 121 VEIALSEDNAQRLTESVTAGGIDLGVLRAPVAN---------PAGIEFHRLLVEDMLLTL 171 Query: 185 RKDHPAL-----HQTWNLDTFLRYPHISICWEQ--SDTWALDNVLQELGRERTIAMSLPE 237 DHP + L R I + L + G E IA + Sbjct: 172 PVDHPLATDAARREGVPLAALARERFILVRRPGAPGMYANLIAACRNAGFEPAIAFEVER 231 Query: 238 FEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKR 297 ++ + A ++ P + ++ + L TL+ Sbjct: 232 MLTNVSLVAA--GAGISVVPASMKDLHR-DNVAYCRLRGAKPRLVAP-----VTLVCR-G 282 Query: 298 NSHNPKIVWLRETIKNLYAS 317 + +P + + L A Sbjct: 283 FNQSPPLRNFIALARQLSAE 302 >UniRef50_C9KJW7 Transcriptional regulator, LysR family n=2 Tax=Veillonellaceae RepID=C9KJW7_9FIRM Length = 304 Score = 224 bits (572), Expect = 4e-57, Method: Composition-based stats. Identities = 40/314 (12%), Positives = 93/314 (29%), Gaps = 26/314 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++ L + + + T+ AK ++V+ +V+K++ L A L S ++ T Sbjct: 1 MEFRQLEYFCTISELENFTRTAKVLHVSQPSVTKAIKALEAELGLTLIDRSQKHVTLTEA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQ-TPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + MQ + L + K+ +++P Sbjct: 61 GRAFLIHARRIMQDAELAKQDMMRFCVGSAGTIHFGVPPMFEAYLFPTFFKEFREKFPTT 120 Query: 127 TIKLRN--WDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 + ++ + + + G++D G V+ D + L Sbjct: 121 LLDVQEFGDSDEVRERVEIGDLDFGVIFGSPETTFPHEF----------VIMHDAMSLCL 170 Query: 185 RKDHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 + HP + ++ R I A+ E G + ++ + + Sbjct: 171 PEGHPLSVKKEVAFESLRRERFILQQPRTYQYRAIFARCIEAGFTPDVMLTTSQLKTIKQ 230 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 + A + ++ P + + V PL + L W +P Sbjct: 231 LVA--NGTGISILPDFVLREEKSF----VRRPLAPRLMSRT------ALYWSAHKVFSPL 278 Query: 304 IVWLRETIKNLYAS 317 +K A+ Sbjct: 279 DRDFLTFMKQYVAA 292 >UniRef50_Q0K190 Transcriptional regulator, LysR-family n=1 Tax=Ralstonia eutropha H16 RepID=Q0K190_RALEH Length = 295 Score = 224 bits (572), Expect = 4e-57, Method: Composition-based stats. Identities = 41/311 (13%), Positives = 102/311 (32%), Gaps = 25/311 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L LL + E + +KAA R++++ +S+ + L L V + + T Sbjct: 1 MELRQLLYFVTVADELNFSKAAVRLHMSQPPLSQQIKALEDEMGVELLVRNRREVRLTDA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHH-QTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + + ++ + + ++ + + +L + ++ +R+P Sbjct: 61 GRAFQADCRAVLEQVRVAVTTARRTAAGDIGTLQIGMVTSGIFHVLPTILTRMAERFPGL 120 Query: 127 TIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 I + + D A+ +G++DIG + +F++ + + Sbjct: 121 HIAVTDMGSADQAHAVMQGKLDIGIVHSIPTRS----------GLGKTPIFTEYFTIVVP 170 Query: 186 KDHPALHQT-WNLDTFLRYPHISICWEQ--SDTWALDNVLQELGRERTIAMSLPEFEQSL 242 + H + L P ++ E + + G IA + + Sbjct: 171 EGHELAARPALALRDLEGVPLVAFSREHAPALFDGMIASCLHAGFSPVIAHTARNPLTTF 230 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 M L +A PR + F E Q + +W ++ + Sbjct: 231 QMVK--LGLGVALVPRSYARAGLPG--------VVFREIGQTAGHIQLYAIWREQAPSDL 280 Query: 303 KIVWLRETIKN 313 + + E + Sbjct: 281 VMRVVSEVMSE 291 >UniRef50_A8ZUD0 Transcriptional regulator, LysR family n=1 Tax=Desulfococcus oleovorans Hxd3 RepID=A8ZUD0_DESOH Length = 298 Score = 224 bits (572), Expect = 4e-57, Method: Composition-based stats. Identities = 50/312 (16%), Positives = 99/312 (31%), Gaps = 24/312 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +DL L +++ RS ++AA + ++ VS + L F L ++PTP Sbjct: 1 MDLWRLRVFCKVVELRSFSRAAAGVRLSQPTVSSHVKDLEDHFGCRLIDRLGRSVAPTPA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + ++ + + + + R + + + +L L + YPQ Sbjct: 61 GELLYRQASDLLARYDGIEAEMAGYQGRVAGRLVIGGSTIPAGHILPGLIGAYRRAYPQV 120 Query: 127 TIKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 T+ L D + I G+ ++ G + I + +D V + Sbjct: 121 TVCLLVGDTEKVFFDILSGKAELAVVGG----------RTADRRIVQQPFLTDEMRVVVP 170 Query: 186 KDHPALHQ-TWNLDTFLRYPHISICWEQSDTWALDNVLQE--LGRE-RTIAMSLPEFEQS 241 HP + T + + P I AL+ L G E + L E Sbjct: 171 ASHPWAGRKTVAVADLAKEPFIVRERGSGTRSALEESLAARGAGIEGLNVVAELGSTEAV 230 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 + + ++ + + L + KL F L + + S + Sbjct: 231 VQGIKS--GIGVSVLSSMAVAADVRAGM------LKALALRGVKLTRVFYLAFLRDRSQS 282 Query: 302 PKIVWLRETIKN 313 P I Sbjct: 283 PAANAFCTLIAA 294 >UniRef50_Q1GMN1 Transcriptional regulator, LysR family n=1 Tax=Ruegeria sp. TM1040 RepID=Q1GMN1_SILST Length = 319 Score = 224 bits (572), Expect = 4e-57, Method: Composition-based stats. Identities = 67/325 (20%), Positives = 123/325 (37%), Gaps = 27/325 (8%) Query: 1 MK-KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSP 59 M K++ +DLNLL L ERSVTKAA + ++ AVS +L +LR DD LF+ S Sbjct: 7 MHQKNLNAIDLNLLKVFSALAAERSVTKAANSVGLSQPAVSHALRRLRDLMDDELFIRST 66 Query: 60 LGLSPTPLMVSMEQNLAEWMQMSNLL--LDKPHHQTPRGLKFELAAESPLMMIMLNALSK 117 G+ PT + + ++M + + + L +++ L+ Sbjct: 67 DGMQPTERCRELAPAIDASLKMLQDAMTVKDDNDPANLRATYRLGMNDLFSTLLVPGLTA 126 Query: 118 QIYQRYPQATIKLR------NWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAID 171 ++ ++ P +++ D+ + RG +D+ P D Sbjct: 127 RVAKQAPNVSLRFLHSMAINQNVDDAYSDLERGRIDLTVI----------QDFDTPSRFD 176 Query: 172 YEVLFSDVPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTI 231 E+L + R HP +++ + HI ++ +D L ++G R I Sbjct: 177 RELLGASEFVCVARAGHPVFQPGLSMEQYTSLGHIMFTTLDAEYSRIDEALSKMGIRRRI 236 Query: 232 AMSLPEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFT 291 + +P + +L A D + Q+ Q L + LP Sbjct: 237 ELRVPHYSAALSATALTDLV-YTVPRILAQHAEQAFGLQVSELPFEAPV-------RKIF 288 Query: 292 LLWHKRNSHNPKIVWLRETIKNLYA 316 +WHK + + WLR + ++ Sbjct: 289 QVWHKTRTKDFGHQWLRNVVSDVSQ 313 >UniRef50_Q0AZ61 Transcriptional regulator, LysR family n=1 Tax=Syntrophomonas wolfei subsp. wolfei str. Goettingen RepID=Q0AZ61_SYNWW Length = 295 Score = 224 bits (572), Expect = 4e-57, Method: Composition-based stats. Identities = 46/312 (14%), Positives = 104/312 (33%), Gaps = 24/312 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++LNL +++ ++++K A+ ++ AV+K + L ++ L + L PT Sbjct: 1 MNLNLFKTYVRVVETKNLSKTAEEFGLSQPAVTKQIQSLEDYYGVLLLERAGRRLKPTEA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHH-QTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 ++ Q E +++ + + L A + +L K+ +P Sbjct: 61 GETLYQYAREIIKLLEKTDNIMETVVESKKGILYLGASTIPGQYILPDYIKKFSDSFPYI 120 Query: 127 TIKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 I L D + + E+DIG G R E D + + Sbjct: 121 NISLDIGDTEKIFKKVAERELDIGLVGGWLSNRKVEGFQ----------WLQDELLLIVP 170 Query: 186 KDHPALHQ-TWNLDTFLRYPHISICWEQSDTWALDNVLQELGRE---RTIAMSLPEFEQS 241 ++H + + ++ L I A + +L G + + M E Sbjct: 171 ENHHLMGRDEVRIEELLHEKWIFREKGSGTRKAAEELLNNHGIKKEDLHVGMEAGSTEAV 230 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 L + ++ + H+ + +L + F +++ ++ S Sbjct: 231 LASVES--GMGISIVSNWAIKKADPHR-RIRSLKID-----DPGATRFFYIIYPRQKSRR 282 Query: 302 PKIVWLRETIKN 313 + + IK Sbjct: 283 KAVESFLDFIKE 294 >UniRef50_A8FJ94 Possible LysR family transcriptional regulator n=2 Tax=Bacillus pumilus RepID=A8FJ94_BACP2 Length = 290 Score = 224 bits (572), Expect = 4e-57, Method: Composition-based stats. Identities = 49/308 (15%), Positives = 107/308 (34%), Gaps = 28/308 (9%) Query: 12 LLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSM 71 +++ S TKA +++ +T S VS ++AKL + L + GL+ T + Sbjct: 8 QYKVFLTVVECGSFTKAGEKLGLTQSGVSHNIAKLESELGVVLLRRNRNGLALTDAGERV 67 Query: 72 EQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNALSKQIYQRYPQATIKL 130 ++ + + ++LL + ++ S ML L ++YP ++L Sbjct: 68 MPHIRQIIHHASLLEQEAALIQGMEVGSIKIGTFSSFSSKMLPQLIHLFTKKYPNIQVEL 127 Query: 131 -RNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHP 189 + + I G +D+GF + + LF D V +++DH Sbjct: 128 YEGGYEEIEEWIASGTIDVGFLTQP------------SREFETIPLFQDELVVLMQEDHR 175 Query: 190 A-LHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQP 248 + +D+ I + +L+E G + + + + + M + Sbjct: 176 FNTKKVIEVDSLHDESFIMPKAGCDL--LIKKLLKERGVKPHVLFEIGDNNTLISMVQE- 232 Query: 249 DNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWLR 308 L + P Q+ ++ L + + L + +P Sbjct: 233 -GLGVTIIPTLILP-PQMSHTKVIPL--------ETSVYREINLAFKSFKVASPSAKRWI 282 Query: 309 ETIKNLYA 316 E +K+ + Sbjct: 283 EVVKDHFK 290 >UniRef50_B8FI63 Transcriptional regulator, LysR family n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FI63_DESAA Length = 304 Score = 224 bits (572), Expect = 4e-57, Method: Composition-based stats. Identities = 50/318 (15%), Positives = 102/318 (32%), Gaps = 24/318 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +DL L +++ S +KAA+ +N++ VS + L + L SPT Sbjct: 1 MDLWQLHIFTKVVELGSFSKAAQAVNLSQPTVSSHIKDLEDHLNCRLIDRLGRKASPTKG 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + + + + +A + +L + + YP Sbjct: 61 GELLYSFATRLLALRDEAQSAMSSFLGKPTGSLAIAGSNIPGCYVLPKVIGAFSKYYPDV 120 Query: 127 TIKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 +I L+ D S+ + + G V++G G S + + + L D + + Sbjct: 121 SISLKIGDTRSVSEDVIAGTVEMGVVGALSPNKQ----------LTQDKLMDDHLTLIVP 170 Query: 186 KDHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGR---ERTIAMSLPEFEQS 241 HP + ++ + P I + VL + G I+ L E Sbjct: 171 ASHPLAEKEAVSIKSIADAPFIIREQGSGTRKFFEKVLADAGIGLDSLNISGQLGSTEAV 230 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 L ++ L L +L E F L+ H++ + + Sbjct: 231 REAIKA--GLGVSIFSTRAV----LGDLRCGSL--KSIEISDLDFRRSFYLVRHRQRTAS 282 Query: 302 PKIVWLRETIKNLYASMA 319 P + + + +A Sbjct: 283 PLCQYFCDFLTANAHDLA 300 >UniRef50_Q3SFM8 Transcriptional regulator n=3 Tax=Proteobacteria RepID=Q3SFM8_THIDA Length = 313 Score = 224 bits (572), Expect = 4e-57, Method: Composition-based stats. Identities = 38/306 (12%), Positives = 84/306 (27%), Gaps = 21/306 (6%) Query: 9 DLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLM 68 L + + + S T+A++ + +T VS + KL PL + + T Sbjct: 6 TFRQLEIFEAIARLGSFTRASEELYLTQPTVSMQMKKLSENVGAPLIEHIGKRIHLTADG 65 Query: 69 VSMEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQIYQRYPQAT 127 + Q E + + + K L A L + + YP Sbjct: 66 QQLAQATREIFAILDRFTMSVAERRGLKQGKLSLMAI-TTASYFAPRLLGEFAKLYPGID 124 Query: 128 IKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKD 187 + LR + + + + + + + + V D Sbjct: 125 VSLRVTNKEQV---------LASIADNLDDLYFLGQPPEDIDVIATPIMDNPIVVLAAPD 175 Query: 188 HPALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAA 246 HP H + L+ + + A++ E G + L E Sbjct: 176 HPLAHTRKIPLEQLAKESWLMREKGSGTRNAIERRFAESGIAVHPRLELGSNEAIKQAIL 235 Query: 247 QPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVW 306 L ++ R+ NQ Q ++ + + + ++ + Sbjct: 236 A--GLGISALSRHALALNQPDQFAVLDVD-------GFPILRHWYAVYPAGRQLSVAARA 286 Query: 307 LRETIK 312 + + Sbjct: 287 FLDYLL 292 >UniRef50_A9WDF5 LysR substrate-binding n=3 Tax=Chloroflexus RepID=A9WDF5_CHLAA Length = 298 Score = 224 bits (572), Expect = 4e-57, Method: Composition-based stats. Identities = 51/310 (16%), Positives = 96/310 (30%), Gaps = 19/310 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 LDL L ++ S++KAA+++++T S VS+ + L LFV G+ TP Sbjct: 2 LDLYKLDIFTRVVAAGSLSKAAEQLHMTQSGVSQHIRALEDSLGTELFVRGRRGVELTPA 61 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + ++ + + + +L + QRYP Sbjct: 62 GQRLLAYCEGIFRLVAEAELAVTDVAGLRDGQLTIGVTPGVSAYLLPEWVQMFRQRYPNL 121 Query: 127 TIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + + ++ + G +D+G L S + + L V + Sbjct: 122 AVSAQTGTTPSIVNELRNGSLDLG--------AIEGELDSAERDLQQQALREFDQYVVVG 173 Query: 186 KDHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 + HP ++ +L P + LD+ L+E I L E M Sbjct: 174 RRHPWWGRSEVHLQELAGQPMVMRQSSSQTRVWLDHALREQSLTPRIIAELDNLESIKRM 233 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 L P Y Q L +P+ ++ + +P Sbjct: 234 VMIGTGL--TILPLYAVTAEQEVG-ALHPIPIAGRPLRRTLRLLWR-----ATRPLSPVA 285 Query: 305 VWLRETIKNL 314 R+ + Sbjct: 286 YAFRQLLIAH 295 >UniRef50_C6W9R3 Transcriptional regulator, LysR family n=1 Tax=Actinosynnema mirum DSM 43827 RepID=C6W9R3_ACTMD Length = 299 Score = 223 bits (571), Expect = 4e-57, Method: Composition-based stats. Identities = 45/312 (14%), Positives = 91/312 (29%), Gaps = 24/312 (7%) Query: 11 NLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVS 70 + L + + S T+ A+R V SAVS ++ +L LF +S T + Sbjct: 7 HQLAYFLAVAETGSFTRGARRAGVVQSAVSAAVTQLERELGAELFERHYHRVSLTAEGEA 66 Query: 71 MEQNLAEWMQMSNLLLDKPHHQTP-RGLKFELAAESPLMMIMLNALSKQIYQRYPQATIK 129 + + + + + L S + L L + R+P+ + Sbjct: 67 LLPRARDVLTALDAAREAVAGARGELVGTVRLGTISFTGPLDLAGLLRSFAARHPRVEVH 126 Query: 130 LRN---WDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRK 186 LR SLD + G +D+ + + + + + + Sbjct: 127 LRQTTSGTATSLDDLRSGALDLALVSTPADGL---------PGVALTEIHREPLVLVCGR 177 Query: 187 DHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMA 245 DHP + + P I + +D+ G R I + +F + + Sbjct: 178 DHPLASAERVGIGQLAGEPFIDFPTGWGNRAVIDHAFASAGVTRAIRTEVTDFALARTLV 237 Query: 246 AQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIV 305 L L+ P + V + ++ E L Sbjct: 238 EH--GLGLSIFPAGAVDGPADGPVARVPI--------RESPEWTIKLARPAPRREGTAAT 287 Query: 306 WLRETIKNLYAS 317 L + + + Sbjct: 288 ALARAVLDAARA 299 >UniRef50_C5CVL6 Transcriptional regulator, LysR family n=5 Tax=cellular organisms RepID=C5CVL6_VARPS Length = 327 Score = 223 bits (571), Expect = 4e-57, Method: Composition-based stats. Identities = 82/319 (25%), Positives = 138/319 (43%), Gaps = 23/319 (7%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 +DL+L+ L ++ +RSV++AA R+ + AVS +L +LR DPL V S G+ P Sbjct: 7 FDKIDLHLIRVLHTVLTDRSVSRAAIRLGMYQPAVSAALKRLRELSGDPLLVRSGSGMVP 66 Query: 65 TPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGL--KFELAAESPLMMIMLNALSKQIYQR 122 T + M + A ++ + +L P+ F +AA + + L L + + Sbjct: 67 TDAGLRMIEPAASILRAAEMLFSDARGFEPQSAATTFRIAASDYMDPLFLPMLVAHVKRE 126 Query: 123 YPQATIKLRNWDYDS--LDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 P I++ DS + G+VD+ P + LF D Sbjct: 127 APLCQIEIHALTPDSDYHGHLALGQVDLVIG----------NWLKPPEDLHMARLFGDEV 176 Query: 181 CVWLRKDHPALHQTWNLDTFLRYPHISICW-EQSDTWALDNVLQELGRERTIAMSLPEFE 239 + +DHPA+ + W+L+T+L HI+ +D +L ELGR+R I F Sbjct: 177 VSLVNQDHPAVRRGWDLETWLAAEHIAPTPMHPGGRGIIDQMLDELGRQRNITARCAHFS 236 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 M A + L T +YC+ + + ++ P+ + LWH+R Sbjct: 237 LIPDMVASSLLV-LTTGRQYCERFAARLPVKILECPVALPRLM-------YYQLWHERTH 288 Query: 300 HNPKIVWLRETIKNLYASM 318 + WLRE IK++ AS+ Sbjct: 289 SSSSARWLRECIKDVAASL 307 >UniRef50_P49518 Probable RuBisCO transcriptional regulator n=3 Tax=Bacillariophyta RepID=RBCR_ODOSI Length = 309 Score = 223 bits (571), Expect = 4e-57, Method: Composition-based stats. Identities = 43/312 (13%), Positives = 96/312 (30%), Gaps = 23/312 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 L L L+ + E+S T+AA+ + V+ ++SK + L + + L +S T Sbjct: 5 FTLQQLRILKAIATEKSFTRAAEVLFVSQPSLSKQIKTLESRLNISLLNRENNIVSLTQA 64 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQT-PRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + + + + A + ++ + Q +PQ Sbjct: 65 GKLFLEYSERILALCEESCRVLNDLKTGDRGNLIVGASQTIGTYLMPRVLALFAQNHPQI 124 Query: 127 TIKLR-NWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 I++ + + G++DI G + + E +D + + Sbjct: 125 NIEVHVDSTRKIAKRVLEGDIDIAVVGGNIPEE-------IEKNLKVEDFVNDELILIIP 177 Query: 186 KDHPAL---HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRER---TIAMSLPEFE 239 K HP + N D I++ + +DN+L ++ E I M L E Sbjct: 178 KSHPFALKKKKKINKDDLYHLNFITLNSNSTIRKLIDNILIQIAFEPKQFNIIMQLNSIE 237 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 L A + + + K+ +++ + Sbjct: 238 AIKTAV--SLGLGAAFVSSSAIEKEIELKT------IEIVTIEDIKITRILSIISNPECY 289 Query: 300 HNPKIVWLRETI 311 + + + Sbjct: 290 RSKAVDLFYNEL 301 >UniRef50_C4KB22 Transcriptional regulator, LysR family n=37 Tax=Betaproteobacteria RepID=C4KB22_THASP Length = 333 Score = 223 bits (571), Expect = 5e-57, Method: Composition-based stats. Identities = 60/319 (18%), Positives = 122/319 (38%), Gaps = 21/319 (6%) Query: 2 KKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLG 61 + S+ DLNLL L + + SV++AA+ + ++ VS +L +LR +PLF+ + G Sbjct: 21 RMSLRDFDLNLLRVLLAVYEAGSVSRAAEHLGLSQPTVSSALGRLRRALGEPLFIKTASG 80 Query: 62 LSPTPLMVSMEQNLAEWMQMSNL--LLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQI 119 ++PT ++ + + + +A ++ L + + Sbjct: 81 VTPTARTHALASSARAMLARLETDFFVADRFDPAKYEGNLTVALSDVGELVFLPRILDSV 140 Query: 120 YQRYPQATI-KLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSD 178 + P A + + + + A+ GEVD+ + E L Sbjct: 141 RRLAPLAMLDSVTLAPGELMRAMEDGEVDLAIGYYPDLDAA---------GFYREKLLDH 191 Query: 179 VPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEF 238 LR DHP + +L+ FL H ++ + + L+ L +R I + P F Sbjct: 192 RFVCLLRADHPVQDRQLSLERFLSLEHAAVRAKGRSQEIFEKYLERLRIQRRIVLRTPHF 251 Query: 239 EQSLFMAAQPDNLLLATAPRYCQYYNQLHQ-LPLVALPLPFDESQQKKLEVPFTLLWHKR 297 + + D + + Y+ ++ + + + PL + WH+ Sbjct: 252 MSLPGIIGRSDLV-VTLPHAIGHYFTRVGEKVRMAEPPLAIP-------HIELYQHWHRG 303 Query: 298 NSHNPKIVWLRETIKNLYA 316 H+P+ WLR + L++ Sbjct: 304 FHHDPRNRWLRTLVAGLFS 322 >UniRef50_Q1N6N4 Transcriptional regulator, LysR family protein n=1 Tax=Bermanella marisrubri RepID=Q1N6N4_9GAMM Length = 300 Score = 223 bits (571), Expect = 5e-57, Method: Composition-based stats. Identities = 48/317 (15%), Positives = 97/317 (30%), Gaps = 35/317 (11%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +D L + + S ++AA R+++T AVSK +A L D LF P + TP Sbjct: 1 MDTQSLQAFIAVAETESFSQAAHRLHLTQPAVSKRIAMLEDTLDCQLFDRLPRKATLTPA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTP-RGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 ++ + + + + + + + L + ++ + YPQ Sbjct: 61 GEALMPKAKHIVSELLEIKTELASLSGDVSGTLRIGTSHHIGLHHLPHILRKFHSTYPQV 120 Query: 127 TIKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + ++ ++ +A+ GE+DI F+ +D + ++ D Sbjct: 121 KLAMQFLGSEAACEALANGELDIAFATLPLEQ---------DPKLDMQAIWRDPLTFVCS 171 Query: 186 KDHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERT----------IAMS 234 HP Q +L ++ I ++ ++ I+M Sbjct: 172 HTHPLSKQKNIHLKDLTQHEAILPEPNTVTFEIIEAAFKKEKLSLQAALPSRYRETISMM 231 Query: 235 LPEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLW 294 E M L A P + L +L L +L Sbjct: 232 SSYMETIKMM--ASVGLGWAVLPDHMAQDKDLIRLNL-----------GIHPYRNLGVLQ 278 Query: 295 HKRNSHNPKIVWLRETI 311 K + + Sbjct: 279 RKGKTLGSAGKAFLAIL 295 >UniRef50_A6ULR6 Transcriptional regulator, LysR family n=1 Tax=Sinorhizobium medicae WSM419 RepID=A6ULR6_SINMW Length = 307 Score = 223 bits (571), Expect = 5e-57, Method: Composition-based stats. Identities = 46/311 (14%), Positives = 91/311 (29%), Gaps = 20/311 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L +++ + +AA+++ T A+SKS+ ++ + L V S G++ T Sbjct: 1 MELRDLQYFEVIATTGHIGRAAEKLGRTQPALSKSVRRIESEIGTKLLVKSGRGVALTTA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQT-PRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 M + L + + + + +L + +I + P Sbjct: 61 GRVMLERARSLRMSVEQNLREMADIAKGAVGNVRVGSGATTAEYLLPLVCSRILREAPGI 120 Query: 127 TIKLRNWDYDSLD-AITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 ++ D L A+ G+VDI S L D V Sbjct: 121 KFEISIGMNDVLRTALNDGKVDIVVGPVTKGDES---------NYTVHRLGEDSVVVAAA 171 Query: 186 KDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGR-ERTIAMSLPEFEQSLFM 244 + HP + + Y + +D E +A+ S + Sbjct: 172 RGHPLTRKKATIADLQDYGWVLPARSVVTRQWIDAAFASRDLSEPDVAIQTNNISLSPRL 231 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 A D L R + V PL + + + + P + Sbjct: 232 IAPTDLL--TFISR------RNLGRGRVGEPLVEISLPETTMHREVVAVHRNSSYMPPAV 283 Query: 305 VWLRETIKNLY 315 +K Sbjct: 284 ERFIAILKQEA 294 >UniRef50_C0WB23 Transcriptional regulator n=1 Tax=Acidaminococcus sp. D21 RepID=C0WB23_9FIRM Length = 298 Score = 223 bits (571), Expect = 5e-57, Method: Composition-based stats. Identities = 46/315 (14%), Positives = 107/315 (33%), Gaps = 26/315 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 + L LL + L + T+AA+ ++++ ++S S+A+L LF ++ TP Sbjct: 1 MTLLQLLYFETLARVLHYTRAAEELHISQPSLSYSIAELEKELGVSLFKREKRKIALTPY 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQ-TPRGLKFELAAESPLMMIMLNALSKQIYQ--RYP 124 + + M + + L + ++ + K +Y+ Sbjct: 61 GERFLPYVKKTMALLEEGKATLRQMKDKAPMNIRLGYFHSISASLVPPIVKALYEEKENQ 120 Query: 125 QATIKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVW 183 + ++ + + G++D+ F+ A+D + + Sbjct: 121 DIRFQFMEDTSYNICEQLKNGKLDLAFTTGR------------DEALDGVTMTKQPLYLT 168 Query: 184 LRKDHPALHQ-TWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 + +HP + + F + P + + S LD + + + E +L Sbjct: 169 VYLEHPLAKKNSVTFADFAKEPMVLLNKTSSLRAQLDQAFIKRSMIPNMVFEVQECNTAL 228 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 A ++ P + +VA+P+ +++ L W K +P Sbjct: 229 QYVA--LKFGVSILPEVPAMQTE----RVVAIPI---NENEQEFFRTVYLSWDKTRPLSP 279 Query: 303 KIVWLRETIKNLYAS 317 + +R I YA+ Sbjct: 280 VVKKVRNWIVQHYAA 294 >UniRef50_C0BKK6 Transcriptional regulator, LysR family n=1 Tax=Flavobacteria bacterium MS024-2A RepID=C0BKK6_9BACT Length = 308 Score = 223 bits (571), Expect = 5e-57, Method: Composition-based stats. Identities = 46/313 (14%), Positives = 101/313 (32%), Gaps = 21/313 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 + L L + +E + T+AA++ VT +S + KL LF + ++ T + Sbjct: 1 MTLTQLQYTIAVAEEGNFTQAAEKCFVTQPTLSMQVQKLEDELGIKLFNRNTKPITLTTI 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTP-RGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + ++ +N + D + G F L +M +L +++P+ Sbjct: 61 GEKIIDQAKMILKEANRMEDIVSTEKGFVGGNFRLGIIPTVMPTLLPMFLNTFIKKFPKV 120 Query: 127 TIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 +K+ ++ + G++D G + L+ + ++ Sbjct: 121 NLKIEELNTAAIIEELKNGKLDAGIAATPLDDVKIIEK----------PLYYEPFVGYIP 170 Query: 186 KDHPALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 + HP +T L + + + + + Q T + FE + + Sbjct: 171 EPHPLSKLKTLALSDLEKMDVLVLEDGHCFRDHVLKICQTPNFSHTFNLKSGSFETLIHL 230 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 D L + P + + +L++ K P I Sbjct: 231 --ANDGLGMTLLPYLQTRNLTPQNAK------NLRSFESPEPAREISLIYSKSQLKLPII 282 Query: 305 VWLRETIKNLYAS 317 L TI++L Sbjct: 283 ESLSATIESLMRG 295 >UniRef50_B6IYM5 RuBisCO operon transcriptional regulator n=1 Tax=Rhodospirillum centenum SW RepID=B6IYM5_RHOCS Length = 314 Score = 223 bits (571), Expect = 5e-57, Method: Composition-based stats. Identities = 47/319 (14%), Positives = 93/319 (29%), Gaps = 23/319 (7%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 SI + L + S + A++ +TP A+S + ++ PLF + Sbjct: 1 MSIRNATIRQLQIFAAAARTLSFARVAEQFRLTPGAISFQIKQIEGLCGFPLFERVGRSV 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNALSKQIYQ 121 T ++ + ++ N + L S ++ L + Sbjct: 61 VLTDAGAALLDHATVILKELNDADQQMEALRGSTGGSVTLGLVST-AKYIVPHLLSRFQA 119 Query: 122 RYPQATIKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 P TI L++ + A+ +G+VDI GR S ++ + Sbjct: 120 ERPGVTITLQDGNRRKIHAAVIKGDVDIAIMGRPSAEV-----------VESVAFANHPS 168 Query: 181 CVWLRKDHPALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFE 239 + HP L I +D + G IAM+ E Sbjct: 169 TIIAAPSHPLTRGGRLRLHDLENERFIVREEGSGTRALMDGFFRSQGLTPRIAMTTSSNE 228 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 + +A R+ L L L + L + ++ + Sbjct: 229 MIKQAVMA--GIGIALISRHTIQLELAIGL-LRELDIE-----GLPLMRAWYVVHRRSLP 280 Query: 300 HNPKIVWLRETIKNLYASM 318 P R+ ++ ++ Sbjct: 281 LLPVHSQFRQFMQERGQAI 299 >UniRef50_Q47TZ7 Putative LysR-family transcriptional regulator n=1 Tax=Thermobifida fusca YX RepID=Q47TZ7_THEFY Length = 305 Score = 223 bits (571), Expect = 5e-57, Method: Composition-based stats. Identities = 55/314 (17%), Positives = 104/314 (33%), Gaps = 21/314 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 LDL L L + + S++ AA+ ++ T AVS +A+L A PL V G+ T Sbjct: 2 LDLTRLRVLCEVARLGSMSAAARALSYTQPAVSHHIARLEAEVGTPLVVRHGRGVRLTEA 61 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + + + ++ + LAA ++ + +R P Sbjct: 62 GRVLVGHAEAVLARLDTAEEEVAAIAGLRAGRVSLAAFPTATAGIVPQALATLRERAPDV 121 Query: 127 TIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + L +SLD + GEVD+ + I L + + L Sbjct: 122 AVTLVEAEPPESLDLLREGEVDVTLAFSYDETP-----PDASTGIREVTLCREQVRLLLP 176 Query: 186 KDHPALHQ-TWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 DHP + T L + ++ C L +V + G E IA + + + Sbjct: 177 GDHPLAAEHTLELAALRKETWVAGCERC--RSHLVHVCRRAGFEPRIAYTTDDHLAVQRL 234 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 + + P+ +Q + +V P + F + + P Sbjct: 235 V--SLGMAVGVLPQLALLLHQGENVAVVDSP-------ELGWRRLFVAV--AGGTIPPAA 283 Query: 305 VWLRETIKNLYASM 318 L + + + Sbjct: 284 AALVDELTAAVGQL 297 >UniRef50_C3JGQ8 LysR-family transcriptional regulator n=2 Tax=Rhodococcus erythropolis RepID=C3JGQ8_RHOER Length = 307 Score = 223 bits (571), Expect = 5e-57, Method: Composition-based stats. Identities = 49/313 (15%), Positives = 93/313 (29%), Gaps = 22/313 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 LDL L L + +E SVT AA + ++S L +L + PLF + GL T Sbjct: 2 LDLIRLRVLVAVAREGSVTAAADSLGYAQPSISHHLRQLESEVGVPLFQRAGRGLRLTDA 61 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + E + + + + + LAA + ++ +YP Sbjct: 62 GAVLVRRATEILGHVDAAVAEVQTYAGLRTGRLRLAAFPSALASLIPQAMAAFTSQYPDV 121 Query: 127 TIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 +I L + +L + +VD+ L + L D + Sbjct: 122 SISLVDAEPPKALALLRNNDVDVAVVFAHEDTPEVGL-----KHVAQTTLLEDPLYLITS 176 Query: 186 KDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMA 245 + + I+ C L G I ++ + Sbjct: 177 ARNADAANEIT--DYAGETWIAGCPSC--RAHLLTACNRAGFIPRIEFETDDYVAVQALV 232 Query: 246 AQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIV 305 A ++T P +Q + +P ++ + + P I Sbjct: 233 ASGSG--VSTLPALALQAHQNPSIRAHRIPGE---------RRTVSVATYGKPPLAPAID 281 Query: 306 WLRETIKNLYASM 318 T+ + SM Sbjct: 282 AFVRTLTAISESM 294 >UniRef50_D0SSL1 Transcriptional regulator n=2 Tax=Acinetobacter RepID=D0SSL1_ACILW Length = 302 Score = 223 bits (571), Expect = 5e-57, Method: Composition-based stats. Identities = 39/313 (12%), Positives = 98/313 (31%), Gaps = 26/313 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L + +E + +KAA ++ ++S+ + L L + + T Sbjct: 1 MELRHLRYFITVAEELNFSKAALKLYTAQPSLSQQIKDLEEDVGVKLLNRTKRKVELTEE 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRGLK-FELAAESPLMMIMLNALSKQIYQRYPQA 126 + + ++ + + + + M + + + + Sbjct: 61 GAVFLEQARLTLAQADKAVAMARQVSQAKQQMLRIGFVPVAEMKIFPYILPNLRVQNSDL 120 Query: 127 TIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 I+L + + + + + +G++D+ F+ + I+ + + + L Sbjct: 121 KIELLSLNNNEQMRLLKKGDLDLTFTRH----------NFNSDEIESQFVIREPLIFLLP 170 Query: 186 KDHPALH-QTWNLDTFLRYPHISICWEQSDT--WALDNVLQELGRERTIAMSLPEFEQSL 242 KDHP + + I EQS T A+ + + G E I ++ Sbjct: 171 KDHPLAKYERIPVKALNGIDFIIPSAEQSLTLNQAILDFAKANGIELNIVQKADNILFNI 230 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 L P Y + + L + + +HK N + Sbjct: 231 NSI--GMGLGCTILPGYIAPLT-MDNTVIRPLDVELPYL-------DLYVSYHKNN-KSY 279 Query: 303 KIVWLRETIKNLY 315 + E + ++ Sbjct: 280 VVSKFLELLTRVF 292 >UniRef50_B0MDT7 Putative uncharacterized protein n=1 Tax=Anaerostipes caccae DSM 14662 RepID=B0MDT7_9FIRM Length = 294 Score = 223 bits (571), Expect = 5e-57, Method: Composition-based stats. Identities = 42/311 (13%), Positives = 101/311 (32%), Gaps = 26/311 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++LN L + L +E+ T+AA +N+T ++S ++ L + LF T Sbjct: 1 MNLNHLYYFRTLAKEQHYTRAAHILNITQPSLSHAINALEKELNVKLFEKIGRNARLTKE 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRGLK-FELAAESPLMMIMLNALSKQIYQRYPQ- 125 + + + + M + + ++ L + + Sbjct: 61 GELFCRYVIQSLDMLDEGRRVVGEVSGMAGGYIDIGYIYTLGSHFIPQNMSDYMKENEGK 120 Query: 126 -ATIKLRNWDYDS-LDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVW 183 + ++ + +G D+ FS + +++ + + + Sbjct: 121 NIRFSFGQGTTEQMIEELKKGTYDLVFSSYKEGE----------DRLNFTPVVEEELVLI 170 Query: 184 LRKDHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 K HP + +L YP+I + ++ + E+ + IA E Sbjct: 171 TPKGHPLAEEEAVDLAKTTDYPYIMFSRKSGLRPFINKLFAEVKAQPFIAYEGEEDSSVA 230 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 + A L ++ PR L + + ++ +++ L+ K +P Sbjct: 231 GLVAA--GLGISIVPRI---------PILETMEVETIPIKRPEIKRYIYLVTQKDKYLSP 279 Query: 303 KIVWLRETIKN 313 + IK+ Sbjct: 280 IVEDFIGFIKS 290 >UniRef50_C0ZI31 Transcriptional regulator n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZI31_BREBN Length = 293 Score = 223 bits (571), Expect = 5e-57, Method: Composition-based stats. Identities = 58/303 (19%), Positives = 97/303 (32%), Gaps = 31/303 (10%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 + L L + S T+AA+ I T SAVS+ + L LF S G++PT + Sbjct: 1 MTLTQLQVFVAAAKAGSFTRAAEEIGFTQSAVSQMIQSLEKELGVSLFQRSRSGITPTSI 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTP-RGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 M + + + +++ + ++ + +A+ + L L +R+P Sbjct: 61 GERMLSHARDILNITSCMTEEANVARGISSGTLRIASIPSVASRFLPGLLGSFRKRFPAV 120 Query: 127 TIKLRNWDYDSLD-AITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 I L D D + + VDI F+ + L D V L Sbjct: 121 DILLLEGDSDEISNWLHSSVVDIAFTVMP------------DKEMQTLPLLQDEMMVILP 168 Query: 186 KDHPALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 HP QT I + +LQE T+ + E L M Sbjct: 169 DTHPLKDSQTLRFSEIAERCFIMPKDGC-----IRKMLQENQITPTVTFEVREVYTILTM 223 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 + + + P Y +VA+PL + L S +P Sbjct: 224 VQE--YIGVTIMPEL---YMPPVIPKVVAIPLS------PPITREVVLAVRNWQSISPLT 272 Query: 305 VWL 307 Sbjct: 273 AEF 275 >UniRef50_A5G2D8 Transcriptional regulator, LysR family n=1 Tax=Acidiphilium cryptum JF-5 RepID=A5G2D8_ACICJ Length = 303 Score = 223 bits (571), Expect = 5e-57, Method: Composition-based stats. Identities = 49/312 (15%), Positives = 94/312 (30%), Gaps = 24/312 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L L +ER T+AA+R+N+ SA+S S+ L D PLFV S + T Sbjct: 1 MELRQLHHFVALAEERQFTRAARRVNIVQSALSTSIRALERELDAPLFVRSTRDVRLTGA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIM-LNALSKQIYQRYPQ 125 + ++ ++ L + L L + +QR+P Sbjct: 61 GEIFLEKARLAIEAVRDARSAVAEVQGLKRGTLKIGTVQSLPAFLDLPLLLARFHQRHPG 120 Query: 126 ATIKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 I+L +L D G +D F + + + ++ D + Sbjct: 121 IEIRLIQGSSSALADRTRAGGIDAAF----------FPVGTHLTDLVTTMIACDEVVLAC 170 Query: 185 RKDHPALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 + HP L+ +P + +D + G R A + + + L Sbjct: 171 PRGHPLEGLTGVTLEAIKDFPFVDFETGWGTRRLVDGRFGDAGIGRHTAFEVSDLDTMLK 230 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 + L +A P + + +L + Sbjct: 231 LV--SLGLGIALLPETV--------VVARDPDIGMARLSSPELCWELVVAHLPVAGPGTP 280 Query: 304 IVWLRETIKNLY 315 + + Sbjct: 281 VAAFLSLLHESL 292 >UniRef50_Q2T940 Transcriptional regulator, LysR family n=6 Tax=Burkholderia RepID=Q2T940_BURTA Length = 395 Score = 223 bits (571), Expect = 5e-57, Method: Composition-based stats. Identities = 47/325 (14%), Positives = 108/325 (33%), Gaps = 33/325 (10%) Query: 2 KKSITTLD----LNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVN 57 ++++ ++ L + L + + R+ T+AA+ ++++ SA+S+ + +L LF Sbjct: 78 RRNMKSMQRNPLLRNICYLLAVDEHRNFTRAAEALSISQSALSQKIRQLEDELGAQLFDR 137 Query: 58 SPLGLSPTPLMVSMEQNLAEW---MQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNA 114 S + T + + + L+ H + + + ++ Sbjct: 138 SGRVVQLTDFGGVYLEYARRAHSDLLTAQRALNDVHDLS--RGQLRIGFTPTFTEYLIAP 195 Query: 115 LSKQIYQRYPQATIKLRNWDYDSLD-AITRGEVDIGFSGRESHPRSRELLSSLPLAIDYE 173 + + ++RYP I++ D+++ A+ +VD+ F + I+ E Sbjct: 196 VIEHFHERYPGIVIEMTEMSLDAVETALGDDQVDLAFGFVDVRS----------DEIEAE 245 Query: 174 VLFSDVPCVWLRKDHPAL--HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTI 231 LF + + HP D P + + +D+ Q + + Sbjct: 246 ALFPERLMLVAGATHPLTTQRDPITPDQLAETPLALLTTSFVSRFYIDSYFQSYDMKPNV 305 Query: 232 AMSLPEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFT 291 A+ L + + + P + + L V L PF Sbjct: 306 ALQANSISAVLKIVRRGK--IATILPGTIE--FEHRDLQYVPLDPPFPV-------RTVA 354 Query: 292 LLWHKRNSHNPKIVWLRETIKNLYA 316 LL K +++ L Sbjct: 355 LLRRKGAYRTVAATAFAASVRALLD 379 >UniRef50_Q15UP0 Transcriptional regulator, LysR family n=4 Tax=Alteromonadales RepID=Q15UP0_PSEA6 Length = 305 Score = 223 bits (571), Expect = 5e-57, Method: Composition-based stats. Identities = 75/319 (23%), Positives = 132/319 (41%), Gaps = 24/319 (7%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 ++ +DLNL + S+TKAA + +T AVS SLA+LR +DPLFV + + Sbjct: 1 MNLNRIDLNLFAVFDAIYTAGSLTKAADVLCITQPAVSNSLARLREMLNDPLFVRTGHSM 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFE--LAAESPLMMIMLNALSKQIY 120 +PTP ++ E + + + + H P + AA L ++ L+ Q+ Sbjct: 61 TPTPAAQNIIGPAREALGLLRKSVQESHTFDPATAEISYNFAARDLLEASIMPRLTAQLQ 120 Query: 121 QRYPQATIKLRNWD-YDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 P T+ + + + A+ G +D + + + + + + D Sbjct: 121 NVAPNITLTNYDISRSNIVSAMASGSLDF---------YADASSAFVDPHLCKQKIAEDR 171 Query: 180 PCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFE 239 V R++HPAL Q NLDTFL+ HI+I ++ +D L +L +R + M F Sbjct: 172 FVVIARRNHPALSQGLNLDTFLQLGHINISQRRTGAGPIDVALDKLNLKRRVVMRGQHFL 231 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 + + D + + + + + LP V + L WH Sbjct: 232 TVPAVIVKTDLIACVP-----YHLAKHYDCSIYELPFEL-------APVEYFLYWHVSAD 279 Query: 300 HNPKIVWLRETIKNLYASM 318 H+ +WLRE I + + Sbjct: 280 HDHAHMWLREQIAEVVTTF 298 >UniRef50_Q74DH4 Transcriptional regulator, LysR family n=1 Tax=Geobacter sulfurreducens RepID=Q74DH4_GEOSL Length = 302 Score = 223 bits (570), Expect = 6e-57, Method: Composition-based stats. Identities = 45/314 (14%), Positives = 86/314 (27%), Gaps = 23/314 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L +E + T+AA R++++ AVS+ + +L LF GL T Sbjct: 1 MELRHLRYFAATAEELNFTRAANRLHISQPAVSRLIKELECELGAQLFTRERFGLRLTAA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQAT 127 +Q + K + S M L+ ++ Q P Sbjct: 61 GEKFLFYARRVLQDCEEGIRAVRENGLNHQKLTIGFISTAMESFLSDALVRLSQERPDID 120 Query: 128 IKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRK 186 + + D + A+ ++D+GF G + VL L Sbjct: 121 VTVNEMSPGDQIAALRYRQIDLGFIGNPHDGAG--------DEFELYVLREVPLVAVLPV 172 Query: 187 DHPALHQT-WNLDTFLRYPHISICWE--QSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 H ++ + I + + G + + L Sbjct: 173 RHRLAGRSEICIGELEGDTFIGYLEDKFPGRNRVISTACARAGFRPKFELKAGSLIEVLG 232 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 M + P + F + V W N++ P Sbjct: 233 MI--GTGKGVCLMPSDVAGLP--------HPNVAFIPLRDPLDPVRLAAAWLPGNTN-PA 281 Query: 304 IVWLRETIKNLYAS 317 + L + +S Sbjct: 282 LHQLIAILAADCSS 295 >UniRef50_C6CDY7 Transcriptional regulator, LysR family n=10 Tax=Enterobacteriaceae RepID=C6CDY7_DICDC Length = 310 Score = 223 bits (570), Expect = 6e-57, Method: Composition-based stats. Identities = 49/312 (15%), Positives = 106/312 (33%), Gaps = 26/312 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L + R T+AA+ + ++ +S+ + KL PLF G+ T Sbjct: 1 MELRYLRYFVAVASARHFTRAAENLGISQPPLSQQIQKLEREIGTPLFKRMARGVEMTEA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHH-QTPRGLKFELAAESPLMMI-MLNALSKQIYQRYPQ 125 + Q+ + +++ +++ H + + M+ +L ++ Q +P Sbjct: 61 GAAFYQDACHILALTDSAIERVHSIARGEAGAINIGFSCAVTFHPMVLSLLQRYRQHFPN 120 Query: 126 ATIKLRNWD-YDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 + R D LD++ +DI F L D E+L ++ + L Sbjct: 121 VRLNPREEHIQDILDSLRNRTIDIAFIRLPCD---------LNDEFDGEILTNEAFQLVL 171 Query: 185 RKDHPALHQT-WNLDTFLRYPHISICWE--QSDTWALDNVLQELGRERTIAMSLPEFEQS 241 HP QT LD + P I E + G + + P + Sbjct: 172 PAGHPLSAQTCIALDQLKQEPLIIFPRELCPGLYDLIVRTCYLSGYQPKLNPLAPHLTAT 231 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 + M A + P+ + + ++ L ++W R+ + Sbjct: 232 INMVAT--GFGVTFVPQSMSCIQNSS--------VSYHDTTTPHLTTQIAVIWR-RHDRS 280 Query: 302 PKIVWLRETIKN 313 ++ + + + Sbjct: 281 VTLMHMIQLLHQ 292 >UniRef50_C1DMS0 Transcriptional regulator, LysR family n=1 Tax=Azotobacter vinelandii DJ RepID=C1DMS0_AZOVD Length = 307 Score = 223 bits (570), Expect = 6e-57, Method: Composition-based stats. Identities = 48/314 (15%), Positives = 106/314 (33%), Gaps = 25/314 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +++ L + +E + +AA+R+ +T A+S+ + +L L + ++ T Sbjct: 1 MEIRQLKYFVAVAEELNFNRAAERLYITQPALSRQIQQLEEAIPAVLLERNSKRVALTDA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQT-PRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + D+ + + ++ + + + + +P Sbjct: 61 GQAFYHQALNILAQLQRAADESRLLAEGKKGSLVIGIFGSSILDFIPRVLLEFGRTHPAV 120 Query: 127 TIKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 I L D D + A+ + IGF+ I+ E++ + + L Sbjct: 121 EISLHPMDKDAQIQALRERRLTIGFNRLVPGEP----------DIEQELVRREALMLALP 170 Query: 186 KDHPA-LHQTWNLDTFLRYPHISICWE--QSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 HP L L+ P I + T + + + +A + + S+ Sbjct: 171 AKHPLAARDAIELGEVLQEPFILYPRGVRRGLTTHVRRLFADYDALPRVAQEVTDVTTSI 230 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 + A L L PR +L + AL + K E+ L+ K +P Sbjct: 231 ALVAG--GLGLCVVPRSAVNL-RLPGVEYRAL------RCRGKAEIELACLYRKG-DGSP 280 Query: 303 KIVWLRETIKNLYA 316 + T++ L + Sbjct: 281 LLRAFLATVRQLAS 294 >UniRef50_D0IWI0 Transcriptional regulator, LysR family n=3 Tax=Comamonadaceae RepID=D0IWI0_COMTE Length = 304 Score = 223 bits (570), Expect = 6e-57, Method: Composition-based stats. Identities = 39/312 (12%), Positives = 92/312 (29%), Gaps = 28/312 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +DL L ++++ T+AA+ ++VT +SK + L F L + G+ T Sbjct: 1 MDLRALRYFIEVVRQNGFTRAAETLHVTQPTISKMVKALEDEFGGRLLLREGRGVQLTDA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTP-RGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + E ++ + LL + L + + QRYP Sbjct: 61 GQVVYDRGMEILEQAQLLRRQVAEVDHITRGDLSLGIMPTTGHY-MAPVIALFQQRYPGV 119 Query: 127 TIKL-RNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 +++ I G++D+ L ++ A++ + V L Sbjct: 120 NLQVNEQGARAQYQLIQEGKLDMALG----------LFAAPDPALERYTVARQKTRVVLP 169 Query: 186 KD---HPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 P Q P + + + + + G + + ++ Sbjct: 170 AQQVTDP--GQPMRWSDLRELPFVLYTSDFALHEHVLQQCEAAGFTPQVKLQTRYWDFIG 227 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 + A + + +Y Q + + ++ L+W + Sbjct: 228 HLVAAQVGVAVMFEHVIARYDPQR---------VASRPLVEPEIPWDVALMWRPG-YLSR 277 Query: 303 KIVWLRETIKNL 314 ++ + Sbjct: 278 AAQAWLNCVREV 289 >UniRef50_Q81BG8 Transcriptional regulators, LysR family n=8 Tax=Bacillaceae RepID=Q81BG8_BACCR Length = 290 Score = 223 bits (570), Expect = 6e-57, Method: Composition-based stats. Identities = 52/306 (16%), Positives = 99/306 (32%), Gaps = 27/306 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 + L L ++ ++++AA+ +NVT S VS ++ L + L + G+ T Sbjct: 1 MSLTKLEIFLKTVEMGNLSRAAEAMNVTQSGVSHAIRSLELEYGFQLLSRNKTGVRLTEN 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTP-RGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + ++ E + + L + + + + L A+ + + YP+ Sbjct: 61 GERVLTHVREVVNHNERLKQTVAEINGIVAGTLRIGTFTSVSIHWLPAIIHRFHLEYPRI 120 Query: 127 TIKLRNWDYDSLD-AITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 IKL DY ++ I +G +D+GF S ++ L D L Sbjct: 121 EIKLMEGDYGMIETWIQQGVIDLGFMSLPSAG-----------HLESIPLRKDRMLCVLP 169 Query: 186 KDHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 K+H Q+ D + P I + VL+ I + + M Sbjct: 170 KNHSLSKQSIIQYDQLEKEPFIMPASSCGYD--VRKVLEAARIHLDIQFETGDDHAIVAM 227 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 + L ++ Q + +V L + K L P Sbjct: 228 VE--NGLGISVMSELALQ-GQCENVTVVEL--------EDKPTRSLGLSLTSIKHALPAT 276 Query: 305 VWLRET 310 E Sbjct: 277 KRFIEH 282 >UniRef50_Q4ZRN4 Regulatory protein, LysR:LysR, substrate-binding n=15 Tax=Proteobacteria RepID=Q4ZRN4_PSEU2 Length = 325 Score = 223 bits (570), Expect = 7e-57, Method: Composition-based stats. Identities = 46/311 (14%), Positives = 99/311 (31%), Gaps = 23/311 (7%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 + L+LN L L++ S + AA+R+++T AVS + +L L L P Sbjct: 30 MRRLNLNHLHTFSLVIAHGSFSAAAERLHLTQPAVSLHVRQLEDQLKLQLIERVGKRLKP 89 Query: 65 TPLMVSMEQNLAEWMQMSNLLLDKPHH-QTPRGLKFELAAESPLMMIMLNALSKQIYQRY 123 T + +++A + L + K + + + +L + + + +R+ Sbjct: 90 TSAGTVLLEHIARIDAVVEDALQALSSHASGVAGKIAIGTGATACIHLLPPMLQALRRRF 149 Query: 124 PQATIKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCV 182 P+ +++ + + L A+ +D+ + RS + L D Sbjct: 150 PELDVRVSTGNTEGILKAVEENLLDLALVTLPAASRS----------LHITPLLEDAFVA 199 Query: 183 WLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 + + P + S +D G M L E Sbjct: 200 IFASSQRPMPAHMTPERLSAQPLVVFEAGSSTRLLIDEWFLHAGIRVKPVMELGSIEAIK 259 Query: 243 FMAAQPDNLLLATAPRYC-QYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 M A L + PR + L ++ L L + + + Sbjct: 260 EMVAAD--LGYSIVPRMAVAALHHRRGLQMLPL--------ATALSRTLGIALRQDKPVS 309 Query: 302 PKIVWLRETIK 312 + + + ++ Sbjct: 310 KALRQVLDALQ 320 >UniRef50_Q0EX23 Transcriptional Regulator, LysR family protein n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0EX23_9PROT Length = 303 Score = 223 bits (570), Expect = 7e-57, Method: Composition-based stats. Identities = 48/313 (15%), Positives = 85/313 (27%), Gaps = 22/313 (7%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 + L L + + + S T+AA+ I++T A+S + +L PLF + Sbjct: 1 MIKATLQQLRLFEAVARFGSFTRAAEAIHLTQPAISIQVKRLEETLGAPLFEQMGKKIYL 60 Query: 65 TPLMVSMEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQIYQRY 123 T + K LAA L +RY Sbjct: 61 TAAGKELYATCRHVFDSLGTFEGKLDELRGEVAGPLNLAAV-TTAKYFLPHYLGAFLRRY 119 Query: 124 PQATIKL-RNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCV 182 P+ +L + + + E DI + I+ D V Sbjct: 120 PKVLPQLKVSNRARITERMEANEDDIYILATLPER----------IDIEVHPFLKDELVV 169 Query: 183 WLRKDHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQS 241 + HP + + L IS + +L E G M L E Sbjct: 170 FAHPKHPLANKKKIPPELLLGERIISREAGSGIRMTFERLLAERGVTLEPYMELGSGEAI 229 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 + +AT + LV L + + + + + Sbjct: 230 KQAVMS--GIGIATLSTFSLKLELETG-RLVVLDVE-----GMPIRRNWYAVHRRGKHLT 281 Query: 302 PKIVWLRETIKNL 314 P + E ++ Sbjct: 282 PSALKFIEFLQTA 294 >UniRef50_Q4KHB2 Transcriptional regulator, LysR family n=28 Tax=Proteobacteria RepID=Q4KHB2_PSEF5 Length = 308 Score = 223 bits (570), Expect = 7e-57, Method: Composition-based stats. Identities = 46/314 (14%), Positives = 93/314 (29%), Gaps = 21/314 (6%) Query: 7 TLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTP 66 L L + Q+ SV++AA ++++ SA S S+ +L LF + LS Sbjct: 2 RFTLRQLQVFVAVAQQESVSRAAGLLSLSQSAASTSITELERQSSCQLFDRAGKRLSLNA 61 Query: 67 LMVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 L + + + + D + ++ + A + + L Q +P++ Sbjct: 62 LGKQLLPQAVALLDQAKEIEDLLNGKSGF-GSLSVGATLTIGNYLATLLIGSFMQVHPES 120 Query: 127 TIKLR-NWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 +KL + + E+D+G + I+ + D V+ Sbjct: 121 QVKLHVQNTAHIVQQVAHYEIDLGLIEGD----------CSHPDIEVQTWVEDELVVFCA 170 Query: 186 KDHPALHQ-TWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 HP + ++ I D ++ I + L E Sbjct: 171 PQHPLAKRGHATMEELTHEAWILREQGSGTRLTFDQAMRHHRSALNIRLELEHTEAIKRA 230 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 + R + P+ L F +WHK+ + Sbjct: 231 VESGLGIGC--ISRLALRDAFRRGSLV---PVETPGL---DLARQFYFIWHKQKYQTSAM 282 Query: 305 VWLRETIKNLYASM 318 E + A + Sbjct: 283 REFLELCRAFTAGV 296 >UniRef50_C8W2B6 Transcriptional regulator, LysR family n=1 Tax=Desulfotomaculum acetoxidans DSM 771 RepID=C8W2B6_DESAS Length = 291 Score = 223 bits (570), Expect = 7e-57, Method: Composition-based stats. Identities = 49/311 (15%), Positives = 101/311 (32%), Gaps = 25/311 (8%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 +T + N L + + S +KA + +N++ AVS+ ++ L LF + Sbjct: 1 MTDIIFNYLRVFHSVARHLSYSKAGEELNLSQPAVSRQISSLEKGLGLDLFTQRGRKVVL 60 Query: 65 TPLMVSMEQNLAEWMQMSNLLLDKPHHQ-TPRGLKFELAAESPLMMIMLNALSKQIYQRY 123 T S+ M ++ + L L +L ++ K+ Y R+ Sbjct: 61 TDAGRSLYDYADRIMGLAQQAGRTLAQYHDLERGEVRLGVSPVLGCYLLPSILKEFYTRF 120 Query: 124 PQATIKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCV 182 P + L+ + I G++D+ I E D + Sbjct: 121 PNIKVSLQLDSGQKLIKRIEDGKLDLALVVGPLES----------DRIHLERYTQDALVL 170 Query: 183 WLRKDHPALHQTWNLDT-FLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQS 241 + + F+ YP I+ S +++ L + + M +P+ E Sbjct: 171 VCPPG----EDSPMFNEIFINYPLITREKPSSTRITIEDHLAKYDIRPKLIMEIPDNEVI 226 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 + + +A P+ LV+ L + + L L+ K H Sbjct: 227 KRLVIT--GIGVAFLPKRAVETE------LVSGALQVVKGEGTALTRWVYLVTAKDQHHC 278 Query: 302 PKIVWLRETIK 312 P ++ ++ Sbjct: 279 PTLLAFMNFMR 289 >UniRef50_A6UGP0 Transcriptional regulator, LysR family n=2 Tax=Sinorhizobium RepID=A6UGP0_SINMW Length = 298 Score = 223 bits (569), Expect = 7e-57, Method: Composition-based stats. Identities = 52/313 (16%), Positives = 103/313 (32%), Gaps = 22/313 (7%) Query: 7 TLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTP 66 + L L + + AA + +T SA+S + L A LF +S T Sbjct: 2 NVTLRQLQAFIAVAELGRFHLAADHLGLTQSAISILIRDLEAVLKHRLFDRHTRMVSLTT 61 Query: 67 LMVSMEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQIYQRYPQ 125 + M + + H + +AA L +L + + +RYP Sbjct: 62 AGAEFLPQARKIMSDLEIAVTNVHELANLQRGRVTIAAAIVLAATLLPPVIARFVKRYPD 121 Query: 126 ATIKLRNWDYDSLD-AITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 +++R+ + + A+ R E D+G +S+ I VL D + Sbjct: 122 IQVQVRDMPEEEIRSALKRNEADLGIG----------TVSADDPEIQASVLMRDQLTLIC 171 Query: 185 RKDHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 R DH + I + + +D+ L G E + ++ Sbjct: 172 RSDHRFARAPQVSWANLAGEALIGLAKDNPLRGLVDHALIASGVEVKTRYEVRFSTTAIS 231 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 M A+ L +A P + + +V L + ++L +++ +P Sbjct: 232 MVAE--GLGIAILPENSRQLTTNVDVRIVDL-------VDPVISRNISILQYRQPMLSPA 282 Query: 304 IVWLRETIKNLYA 316 ++E + Sbjct: 283 AAKMKEFLMGASR 295 >UniRef50_UPI0001C36638 LysR family transcriptional regulator n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C36638 Length = 301 Score = 223 bits (569), Expect = 7e-57, Method: Composition-based stats. Identities = 49/317 (15%), Positives = 104/317 (32%), Gaps = 26/317 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L + + +S ++AAK++ +T VS + L LF+ + + +P Sbjct: 1 MNLKQLEAFVCVAEVKSFSQAAKKLYLTQPTVSAHIHSLEKELGARLFIRTTKDVELSPA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQT-PRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + N + +Q+ +L P K + A + +L + + YP Sbjct: 61 GELLYGNARKMLQLEKNILRDFTRADTPGIQKITVGASTVPGQYILPQILSLFSRTYPGN 120 Query: 127 TIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 ++L D + + + G+V+IGF+G + +E + D V Sbjct: 121 QLELMEADSLEVVRMVLDGKVEIGFTGTRLEDPTC----------VFEPFYYDRLVVITP 170 Query: 186 KDHPAL---HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERT---IAMSLPEFE 239 + ++ F I + L+E G + + ++ E Sbjct: 171 NAEAYREYEKTGFPIERFYEEKWIIREEGSGTRKETERYLKEHGVDLRRMNVVATISNQE 230 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 + +A L+ PL + + ++W K N Sbjct: 231 TIKKSV--STAMGIAMISSAAVEDYVASG-QLLRFPLA-----EGDIYRKLYMVWSKSNK 282 Query: 300 HNPKIVWLRETIKNLYA 316 + ++ LYA Sbjct: 283 PGKAARLFIQFVRELYA 299 >UniRef50_A8SVR7 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=A8SVR7_9FIRM Length = 291 Score = 223 bits (569), Expect = 8e-57, Method: Composition-based stats. Identities = 42/310 (13%), Positives = 94/310 (30%), Gaps = 25/310 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L+ + L + T AA+ +N+T ++S ++++L LF + T Sbjct: 1 MNLSYIRYFVELAHVQHYTNAARNLNITQPSLSHAISQLEEELGVMLFEKNGRNTELTAF 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRY--PQ 125 + + ++ + L PL M + L+ + ++ Sbjct: 61 GREFLACAERSLGTLDAGVESIQKEAAGDGVIRLGLIRPLGMEFVPRLAAEYLKKAENRN 120 Query: 126 ATIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 + LD + + D+ F R + + V Sbjct: 121 VSFTFHTGTTGQLLDDLAARKYDMVFCSRPPET----------MGFSAIPVGRQDLVVIA 170 Query: 185 RKDHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 HP + L LRY H+ +D + + LG+ IA E E Sbjct: 171 PSGHPLADRDSVTLGDTLRYKHVYFSKGSGMRSLVDEMFEGLGKAPEIACETEEDEVIAG 230 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 + A + + L L + + + ++ + ++ R +P Sbjct: 231 LVATGFGIAVVPYMDM-----------LKRLDVKVLSIKHQPVDRLYYVVHDSRTYMSPV 279 Query: 304 IVWLRETIKN 313 + + + Sbjct: 280 ATKFHKYVLS 289 >UniRef50_Q7W5S7 LysR-family transcriptional regulator n=3 Tax=Bordetella RepID=Q7W5S7_BORPA Length = 315 Score = 223 bits (569), Expect = 8e-57, Method: Composition-based stats. Identities = 46/314 (14%), Positives = 98/314 (31%), Gaps = 29/314 (9%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L +L + +AA R+ + +S+ + L LF G+S T Sbjct: 16 MELRHLRYFLMLAETLHFGRAASRLGIAQPPLSRQIRDLEEQVGATLFYRGTRGVSLTDA 75 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQ-TPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 V+ Q A+ + ++ + + R + + L +L + Q++P Sbjct: 76 GVAFAQRAAQIVAAADEAVFEAREAGQGRTGRIVIGFVHSLAYSLLPRVLPGFRQKHPGI 135 Query: 127 TIKLRNWD-YDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + LR D A+ G++D G I +F + + L Sbjct: 136 AVSLREVTVADKESALLSGQIDTGIYRPTVR----------HPEIATLPIFEEGFVLALP 185 Query: 186 KDHPALH-QTWNLDTFLRYPHISICW---EQSDTWALDNVLQELGRERTIAMSLPEFEQS 241 HP + ++ + P I + + L+ + Sbjct: 186 SGHPLARKRRVSVHSLRDQPLILFRALRGDVGLHGTIAAFLRAHDVPVKACEEVGTIHVG 245 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWH---KRN 298 + + + + P + + +V P + V T+ W Sbjct: 246 MGLVLA--GVGVCIIPETSRMVHIEG---VVTRPFA-----EATTRVSSTVCWRHQDSSR 295 Query: 299 SHNPKIVWLRETIK 312 S + + +RE I+ Sbjct: 296 SLDAWVRHVRELIR 309 >UniRef50_B1HZ14 Transcriptional regulator-like protein (LysR family) n=2 Tax=Bacillaceae RepID=B1HZ14_LYSSC Length = 295 Score = 223 bits (569), Expect = 8e-57, Method: Composition-based stats. Identities = 42/308 (13%), Positives = 99/308 (32%), Gaps = 22/308 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L +++ S TKAA V+ ++SKS+ KL L S + T Sbjct: 6 MELRDLKAFMSVVEHGSFTKAANESFVSQPSLSKSIKKLEDTLHVELLNRSTRNVELTDA 65 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTP-RGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + + M L + +L + + ++++ +Q+YP Sbjct: 66 GSIVFKQGQKIMLSVQDLHILLDDLLNIKTGSIKLGIPPLIGTLFFPKIAREFHQQYPDV 125 Query: 127 TIKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 ++L ++ + G VD+G + R + D V++ Sbjct: 126 HLELVERGAKTVGTLVENGNVDMGIVVLPTDERK----------FSVQPFVEDQFYVFIN 175 Query: 186 KDHPALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 + HP + L I E + + + +G + +++ + + Sbjct: 176 ELHPLAQFKEIQLQDLKNETFIIFAEEFALHDYVIKSCESVGFSPHVGYKSSQWDLIVEL 235 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 + L + P + ++ L + ++ K + + Sbjct: 236 VSSN--LGITLLPYSIAAKQTNKNVKMIPL-------ANFDMPWRLGIITKKNTYQSYAL 286 Query: 305 VWLRETIK 312 L T++ Sbjct: 287 KQLLNTMR 294 >UniRef50_D0J1D7 Transcriptional regulator, LysR family n=12 Tax=Bacteria RepID=D0J1D7_COMTE Length = 306 Score = 223 bits (569), Expect = 8e-57, Method: Composition-based stats. Identities = 53/317 (16%), Positives = 103/317 (32%), Gaps = 25/317 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 LD+ L + +E V +AA+R++++ S +S+ +A+L LF S + T Sbjct: 2 LDIRQLQYFVAVAEEEHVGRAAERLHISQSPLSRQIAQLEDKLGLVLFERSQQRIRLTRD 61 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQ-TPRGLKFELAAESPLMMI-MLNALSKQIYQRYPQ 125 + + +N L + M +L +++ Q P Sbjct: 62 GRTFLAETRALLTHANRLESLGRRLGRGDEGGLCIGYLEYAMHSGVLPNALRELGQGRPA 121 Query: 126 ATIKLR-NWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 I L L+ + + +DI ++ + +D + + Sbjct: 122 VHIALYNQQSDAQLEGLRQRSLDIALVCEPPQ--------PDDPDLEAAQVLNDPMLLAV 173 Query: 185 RKDHPALHQT-WNLDTFLRYPHISI-CWEQSDT-WALDNVLQELGRERTIAMSLPEFEQS 241 K HP + + I + E + L + G TI+M E + Sbjct: 174 PKGHPLAEKQDIEPADLAQQRWIGVKHKESALRHDTLIAACAKAGFTPTISMEATEPLAA 233 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 L + A L + T + ++ + E P WHK N Sbjct: 234 LGLVAA--GLGVTTIQQSLRHQTPEG--------VMLRELSWLTYRTPLWAAWHKIN-LR 282 Query: 302 PKIVWLRETIKNLYASM 318 P + R+T+ + + M Sbjct: 283 PLVEEFRKTLVSASSEM 299 >UniRef50_Q7W108 Probable LysR-family transcriptional regulator n=2 Tax=Bordetella RepID=Q7W108_BORPA Length = 305 Score = 223 bits (569), Expect = 8e-57, Method: Composition-based stats. Identities = 41/313 (13%), Positives = 93/313 (29%), Gaps = 24/313 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +D + L C + +E SV+ AA R+++T +S L KL LF L PT Sbjct: 1 MDEHRLKCFVAVYEEGSVSAAAVRLHMTQPPLSILLRKLEDELRVGLFDRGGRRLVPTAA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQ-TPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + + + + + ++ + + + + Sbjct: 61 GELFYLRAKAMLANLQTIRRELREVEQGARGLVHIGCSTAASLFIVPRVMEDLAAEGLEI 120 Query: 127 TIKLRNWD-YDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + + + L + +D+ + ++ +V+ + V L Sbjct: 121 VLHVHEGEIGYMLQQLRERSLDLTICRS----------QHMAPDLESQVIMEEPLFVALP 170 Query: 186 KDHPALHQ-TWNLDTFLRYPHISI--CWEQSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 HP + L + + + + G + E Sbjct: 171 PGHPLAGRARVRLADLRDERFLLHRSPLGTGISDMVLRACRNAGFAPNVVYWGG--ETLP 228 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 + L +A AP+ LV + + ++W ++ + +P Sbjct: 229 MLLMARRGLGIAFAPQSFAQLGLQGLAALVPV-------ADAEFRTHLNMVWPRQQALSP 281 Query: 303 KIVWLRETIKNLY 315 W+RE I + Sbjct: 282 IASWVRELIMKRF 294 >UniRef50_B3DZ70 Transcriptional regulator, LysR/CysB family n=5 Tax=Verrucomicrobia RepID=B3DZ70_METI4 Length = 309 Score = 223 bits (569), Expect = 9e-57, Method: Composition-based stats. Identities = 52/309 (16%), Positives = 93/309 (30%), Gaps = 23/309 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRIN-VTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTP 66 + + L + L++ RS +KAA+ +N ++ SAVS+ + L F PL + T Sbjct: 1 MQIETLKAFRDLVESRSFSKAAQ-LNKISQSAVSQQIRSLEERFGVPLIERGSRKVQLTK 59 Query: 67 LMVSMEQNLAEWMQMSNLLLDKPHHQ-TPRGLKFELAAESPLMMIMLNALSKQIYQRYPQ 125 + E + + + K ++A + + L K+ + YP+ Sbjct: 60 EGEILYHAAREIVDIYTRIEAKITEIKASVSGNIRVSAIYSVGLHELPYYLKKFLKLYPE 119 Query: 126 ATIKLR-NWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 I++ I G DIG S + I E D V Sbjct: 120 VNIRVEYRHSRQVYQDIIEGNSDIGIVAYPSPRKL----------IKIEPFRKDRMVVIC 169 Query: 185 RKDHPALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 H + L+ R I+ + LD + ++ G E M E Sbjct: 170 SPTHRFSQLKEVGLEEIAREGFIAFSSDMPTRRELDKLFRDRGLEFRPVMEFDNVETVKR 229 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 + + Q L E P +L+ P Sbjct: 230 AVEIDAGVAIVPMATITQEIRNGT--------LKMLELSGPPCYRPIGILYKSGRMLTPA 281 Query: 304 IVWLRETIK 312 + E ++ Sbjct: 282 MRKFIEILQ 290 >UniRef50_A6EYC4 LysR family regulatory protein n=1 Tax=Marinobacter algicola DG893 RepID=A6EYC4_9ALTE Length = 300 Score = 223 bits (569), Expect = 9e-57, Method: Composition-based stats. Identities = 69/319 (21%), Positives = 132/319 (41%), Gaps = 21/319 (6%) Query: 1 MKKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPL 60 MK ++ ++DLNLL +M+ +++AA + ++ A+S +L +LR DPLFV + Sbjct: 1 MKLNLRSVDLNLLPVFDAIMEAGQLSRAADSLGMSQPAISAALQRLRHTLGDPLFVRTHQ 60 Query: 61 GLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQ 118 G+ PTP + ++L++ + LD + P +F + + M++L L + Sbjct: 61 GMVPTPRARELHRSLSQQLGAMRDTLDPANRFVPGTSQRRFRVLSNDYFEMVVLPTLLTR 120 Query: 119 IYQRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSD 178 + P +++ D + E D+ + ++ + +VL ++ Sbjct: 121 LRSEAPNVVVEVALAGDDMPQRLYTAEADLAV----------DAFATENDRLRRQVLLAE 170 Query: 179 VPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEF 238 V RKDHP L + FL H+ + LD +L E G +R + +F Sbjct: 171 RLAVVARKDHPDLWDDCSKQQFLDAEHVVLPDRNR-RLPLDQILNEPGWQRRTGARVTQF 229 Query: 239 EQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRN 298 L ++ D + R Q Y + L + P+ P LLW Sbjct: 230 ASMLATCSRSDMIA-TVPERLAQQYARAFGLKTLPFPVEVPPL-------PVYLLWAPVM 281 Query: 299 SHNPKIVWLRETIKNLYAS 317 ++P +W R+ + ++ Sbjct: 282 DNDPAHIWFRQRLMESVST 300 >UniRef50_Q9RYH7 Transcriptional regulator, HTH_1 family n=2 Tax=Bacteria RepID=Q9RYH7_DEIRA Length = 316 Score = 223 bits (569), Expect = 9e-57, Method: Composition-based stats. Identities = 41/288 (14%), Positives = 86/288 (29%), Gaps = 18/288 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L + ER+VT+AA R+ + +S+ + +L PLF P G+ T Sbjct: 17 MELRHLRYFLAVADERNVTRAAARLGIQQPPLSQQIRELEREIGTPLFHRVPRGVELTEA 76 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQ-TPRGLKFELAAESPLM-MIMLNALSKQIYQRYPQ 125 + + + + + + + L ++ YP Sbjct: 77 GHTFLRLVQSIPAQVEGATHEARRAGRGETGELRVGFTGAASINPQVQGLLRRYRDLYPD 136 Query: 126 ATIKLRN-WDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 + L LD + ++D + + ++ + + Sbjct: 137 VRLTLTEKNTVTLLDELRSHQLDAVLARPLPQHLG---------DLTLTLVAREPMVAVV 187 Query: 185 RKDHPALH-QTWNLDTFLRYPHISICWEQS--DTWALDNVLQELGRERTIAMSLPEFEQS 241 + HPA + L+ I+ E + + G E + P+ Sbjct: 188 PRGHPAAQTRPLPLERLRDETFITTPREFGPLIYDTVWQACRAAGFEPRLGQLAPQMLSI 247 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVP 289 + + A L ++ P + L + L P L P Sbjct: 248 VSLVAA--GLGVSLVPDAMRRL-NLEGCEYLELRPPVPTVDLTLLCRP 292 >UniRef50_A0R5A9 Transcriptional regulatory protein n=16 Tax=Bacteria RepID=A0R5A9_MYCS2 Length = 309 Score = 222 bits (568), Expect = 9e-57, Method: Composition-based stats. Identities = 41/310 (13%), Positives = 98/310 (31%), Gaps = 25/310 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 L+ L C + +E +AA+R+++T +S+ + +L L + ++ TP Sbjct: 2 FSLSRLSCFIAVAEELHFGRAAERLHMTQPPLSRQIQQLENELGVHLIDRTTRSVTLTPA 61 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHH-QTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 V+ + +Q++ + + +L L ++ P Sbjct: 62 GVAFLPDARRILQLAEGAALNVKRVPAGDLGTVVIGFTAASAHAVLPRLLDAAREQLPDV 121 Query: 127 TIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 T+ LR ++ + GE+D+G + + L + L Sbjct: 122 TLDLREMVTAAQIEGLMTGELDLGMARPPLKRP----------GLVSRPLLHEQLIAALP 171 Query: 186 KDHPA--LHQTWNLDTFLRYPHISICWEQS--DTWALDNVLQELGRERTIAMSLPEFEQS 241 HP + + L+ I Q+ L + G + + Sbjct: 172 ASHPLVDVGRQLTLNDLDGQDMIMYSPVQARYFNELLISTFTIAGATPRYVQYVTQVHTM 231 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 L + + +A P + + ++ ++ V +W +++ Sbjct: 232 LVLVRS--GIGIALVPASAATLHP-EGVVFRSI------GAFRERPVELDAVWRGDSTNP 282 Query: 302 PKIVWLRETI 311 + LR+ + Sbjct: 283 ALLRLLRDVL 292 >UniRef50_B4STD8 Transcriptional regulator, LysR family n=6 Tax=Gammaproteobacteria RepID=B4STD8_STRM5 Length = 295 Score = 222 bits (568), Expect = 1e-56, Method: Composition-based stats. Identities = 51/313 (16%), Positives = 93/313 (29%), Gaps = 25/313 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L L +E + T+AA+R +V SA+S +A L PLF P + T Sbjct: 1 MNLKQLEFAVALAEEGNFTRAAERCHVVQSALSHQIANLEQELGTPLFERLPRQVRATAA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + + + L + + S L I + A+ Q +PQ Sbjct: 61 GEVLLVHARQVLASLRHLRADVAAVSGEVRGLLAIGQISSLTDIDVVAMLAAFQQAHPQV 120 Query: 127 TIKLR-NWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 +LR + D + + E+D+ G + +++L + L Sbjct: 121 EFQLRVDKSEDLIAQVQSRELDVALVGLAPSAGL--------DGVCHQMLQEEDLVAVLA 172 Query: 186 KDHPALHQ-TWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 H L + D+ G T+ + E Sbjct: 173 PSHRLAGHTRLPLAALQDEALVDFPRGTGARRQTDDAFAAAGLPHTVRFEVNLMELIERF 232 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 L + P Q +V +PL Q L+W + P Sbjct: 233 VRH--GLAVGIVPALIADGFQG----VVQIPL------QPTPTRRVHLVW--QRLPTPAA 278 Query: 305 VWLRETIKNLYAS 317 + + + Sbjct: 279 RAFVAAVLSRAGA 291 >UniRef50_C7RSN5 Transcriptional regulator, LysR family n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RSN5_9PROT Length = 300 Score = 222 bits (568), Expect = 1e-56, Method: Composition-based stats. Identities = 56/315 (17%), Positives = 111/315 (35%), Gaps = 25/315 (7%) Query: 11 NLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVS 70 L + + S TKA + +++T AV+ + +L F+ LF ++ T Sbjct: 4 RRLQVFHAVAKHLSFTKAGEALHMTQPAVTFQIKQLEERFNTRLFDRGGGRIALTQAGEL 63 Query: 71 MEQNLAEWMQMSNLLLDKPHHQTP-RGLKFELAAESPLMMIMLNALSKQIYQRYPQATIK 129 + + +S L + T + A + + ML + + RYPQ + Sbjct: 64 VLDYAERILGLSADLDLRVAEMTGQMSGSLLVGASTTIAEFMLPPILGEFNVRYPQVRAR 123 Query: 130 LRNWDYDSLD-AITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDH 188 L + +++ AI +DIG + ++ EV D V H Sbjct: 124 LTVANSEAISNAIAAHTLDIGLVESLVN----------HPSLQCEVCGDDELQVICTPTH 173 Query: 189 PALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRER---TIAMSLPEFEQSLFM 244 P +T + + + + I+ D+ L+ G E M L E + Sbjct: 174 PLAQRTDVDARSLMAHDFIAREPGSGTREVTDDYLRACGVEPAQIKTLMELASPEALKGV 233 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 A L + R + LVA+PL + +L+ +L++ K + + Sbjct: 234 VAT--GLGFSIVSRASFEKERQLG-SLVAIPL------RPRLKRTLSLVYQKERFRSKVV 284 Query: 305 VWLRETIKNLYASMA 319 + + +N ++ Sbjct: 285 LTFVDFARNKLRELS 299 >UniRef50_Q30Z73 Transcriptional regulator, LysR family n=3 Tax=Desulfovibrio RepID=Q30Z73_DESDG Length = 319 Score = 222 bits (568), Expect = 1e-56, Method: Composition-based stats. Identities = 37/317 (11%), Positives = 85/317 (26%), Gaps = 23/317 (7%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 I +D L + + RS ++A + ++ +S ++ L D L G+ P Sbjct: 21 IDMIDFRRLEAFCKVYELRSFSRAGDELFLSQPTISAHVSALEKELDVRLLDRMGRGVLP 80 Query: 65 TPLMVSMEQNLAEWMQMSNLLLDKPHHQTP-RGLKFELAAESPLMMIMLNALSKQIYQRY 123 TP + ++ + + + A + +L + + + Sbjct: 81 TPAGEILYRHAMTAFASLETAHLEISQLQDIITGEVPVGASTIPAQYLLPPVMAAYMRSF 140 Query: 124 PQATIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCV 182 P+ ++LR + + + GE+ +G G I + + D + Sbjct: 141 PEVQLQLRTGDTGEIIRKVGAGELTLGVVGAHDQQP----------DIVFTPIIDDELII 190 Query: 183 WLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGR---ERTIAMSLPEFE 239 D + + ++ P + L G + + Sbjct: 191 IGAPDFAPRSGSVSCESLADMPWVVREAGSGTWKIFSAALGTHGIDCRSFRPVACVDSSQ 250 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 + L ++ R L + F ++H R Sbjct: 251 SVIQCVRA--GLGVSVTSRIAVAEFLSRG------ELVEITVDGLDVRREFFCIYHSRRQ 302 Query: 300 HNPKIVWLRETIKNLYA 316 P E + Sbjct: 303 LFPAARHFIEFLTKKCR 319 >UniRef50_B7H3Y5 HTH-type transcriptional regulator alsR (Als operon regulatoryprotein) n=12 Tax=Acinetobacter RepID=B7H3Y5_ACIB3 Length = 300 Score = 222 bits (568), Expect = 1e-56, Method: Composition-based stats. Identities = 51/317 (16%), Positives = 110/317 (34%), Gaps = 25/317 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 LDL L ++++ER++T AA R+ + +++ L KL L + P G+ PT Sbjct: 2 LDLYKLHAFVVVVEERNITHAANRLFIQQPPLTRLLKKLEQELGTQLLIRQPRGIEPTEA 61 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQ-TPRGLKFELAAESPLMMI-MLNALSKQIYQRYPQ 125 +++ + ++ + + + + + S + +++ + + + YP Sbjct: 62 GLALFKEAQLLLEHARHIPKLVQDVSQGKTGQLNIGFTSSAGLHPLISLVLRSYREMYPA 121 Query: 126 ATIKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 KL LD + ++DI F S + + + + + V L Sbjct: 122 VQTKLEEAGSQKQLDWLISEKLDIAFLRAPI---------SRDIGLKHLHILDEPMVVAL 172 Query: 185 RKDHPALH-QTWNLDTFLRYPHISICW--EQSDTWALDNVLQELGRERTIAMSLPEFEQS 241 HP + +L + Q + + G I P + Sbjct: 173 PIGHPLTQKKKISLSNLSEENFVLYRRSSGQGLYDNILYSCYQAGFSPRIIQEAPRPTAT 232 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 L + A + ++ P + +V KL P L+ + N ++ Sbjct: 233 LNLVAA--GIGISIVPASMHNFWDHE---IVYREFD----DSIKLNAPIYLITRE-NENS 282 Query: 302 PKIVWLRETIKNLYASM 318 K+ E ++ L +M Sbjct: 283 AKVSNFIELMQKLLPTM 299 >UniRef50_B8D275 Transcriptional regulator, LysR family n=11 Tax=Clostridia RepID=B8D275_HALOH Length = 296 Score = 222 bits (568), Expect = 1e-56, Method: Composition-based stats. Identities = 40/307 (13%), Positives = 101/307 (32%), Gaps = 21/307 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L ++ + ++++KAAK++ ++ A+S+++++L + LF L T Sbjct: 1 MNLRQLKIFVMVCKTKNMSKAAKKLYMSQPAISQTISELEEDLNIKLFDRIKKRLKLTYA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + +N + + + + K + A + +L + + +Y + Sbjct: 61 GKILLRNSKRILNLVDETENIIKDIVNMNQGKLRIGASMTIGTYLLPQIIEGFLNKYNKI 120 Query: 127 TIKLRNWDYDSLD-AITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + + ++ I ++D+ I E F D + Sbjct: 121 HLPFTIDNTKVIEDMILDNKLDLALVEGPI----------YCKDILVEHFFDDQLYLMCS 170 Query: 186 KDHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 H H+ N + I ++N++++ + + E Sbjct: 171 SKHSWSHKRKINSEELKGEDFIIREKGSGTRETIENIMRKHSIKYHVTHVFNNIEAIKRA 230 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 L ++ P C L L + Q + + F++++HK + Sbjct: 231 IISN--LGVSILPEICVKEELKKGL------LVKVDIQGIEFKRKFSIIYHKDKYRSQLF 282 Query: 305 VWLRETI 311 I Sbjct: 283 NNFVNHI 289 >UniRef50_B3E4Z6 Transcriptional regulator, LysR family n=3 Tax=Desulfuromonadales RepID=B3E4Z6_GEOLS Length = 304 Score = 222 bits (568), Expect = 1e-56, Method: Composition-based stats. Identities = 44/313 (14%), Positives = 90/313 (28%), Gaps = 26/313 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +D+ L + + S TKAA+++++ A+S ++ KL D L ++ T Sbjct: 1 MDVKQLKFFMGVAECESFTKAAEKLHIAQPALSIAIKKLEEELDVLLLNRRDRRITLTAE 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTP-RGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 ++ + +Q N + + + L + Q +P Sbjct: 61 GEALLLHAQGILQGVNNAKREIDDLRGLLKGEVRVGLTPMLSSYFFPKIIASFKQSHPGL 120 Query: 127 TIKLRNWDYDSLDA-ITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 I + ++ I GE+D+G E P +D L + + Sbjct: 121 KISISGDSAWNIQRKIESGELDVGVIAGEV-----------PEGLDTHHLLREEIVACVY 169 Query: 186 KDHPALHQ-TWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 HP + L LR P I +D++ E + F + Sbjct: 170 PGHPFAGRKKVALCELLREPLIHYKEGYHLRELIDDLHSEERITPVVVAESNLFTLIRSL 229 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 + L + S +L + + W K + + Sbjct: 230 VKERLGLAF-FLKMVVARDAE-----------VVAISSDPQLFMDLHIAWKKNSYLSKAN 277 Query: 305 VWLRETIKNLYAS 317 + + Sbjct: 278 RAFVDFLIRELDE 290 >UniRef50_B7RU53 LysR substrate binding domain protein n=2 Tax=unclassified Gammaproteobacteria (miscellaneous) RepID=B7RU53_9GAMM Length = 297 Score = 222 bits (568), Expect = 1e-56, Method: Composition-based stats. Identities = 49/306 (16%), Positives = 102/306 (33%), Gaps = 26/306 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +D L L+ + S ++AA+++++T AVSK +A L LF +S T Sbjct: 1 MDTQNLKAFILVAETGSFSQAAEKLHLTQPAVSKRVALLEEQLGTELFDRIGRIISLTEA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTP-RGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 ++ + + + LA + + L + Q +P+ Sbjct: 61 GKALLPQAKSVERALDAAEQSVRDLAGDVAGQLRLATSHHIGLHRLPPVLSSFSQTFPEV 120 Query: 127 TIKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 I + D + + I++G+V++ ++ + ++ D + Sbjct: 121 HIDIDFMDSEQAYELISQGKVELAVVTLAPKEQT---------NVISLPVWQDPLDFMIA 171 Query: 186 KDHPALHQ--TWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 KDH L T +L R+P I + + G + ++++ E Sbjct: 172 KDHELLRSGNTPDLQAMSRHPAILPGLNTYTGQIIKRLFDSHGLQLEVSLATNYLETIRM 231 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 M L PR + + L + +E L++H+ S + Sbjct: 232 M--ASVGLGWTILPRSMRDES-----------LATIDVASVAIERTLGLIYHRGRSLSRA 278 Query: 304 IVWLRE 309 E Sbjct: 279 AKAFIE 284 >UniRef50_Q1IBR2 Putative transcriptional regulator, LysR family n=1 Tax=Pseudomonas entomophila L48 RepID=Q1IBR2_PSEE4 Length = 293 Score = 222 bits (568), Expect = 1e-56, Method: Composition-based stats. Identities = 44/309 (14%), Positives = 94/309 (30%), Gaps = 24/309 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++ LL + +E +AA+R+++ +S+++A+L LF G+ TP Sbjct: 2 IETRLLRQFVAVAEELHFHRAAERLHMAQPPLSQAIARLEQRLGFILFQRHSRGVRLTPA 61 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQT-PRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + +Q L + + + + + + L K+ Q++P Sbjct: 62 GTQLLDTARATLQGLELGVQQARRIAQGQAGALRIGSLALAGHPPLLDGLKRFRQQWPDV 121 Query: 127 TIKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + L+ L + ++D+ + L + + + + L Sbjct: 122 ELSLQQASSAQLARMLLDEQLDLAVLRD---------VPELDERLQRHMWHEEPLLLALP 172 Query: 186 KDHPALHQ-TWNLDTFLRYPHISICW--EQSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 DHP + L F P + L + + G I + + Sbjct: 173 ADHPRADASSVALADFADEPFVFTPRSLGSRYHQHLLELCLDAGFSPRIVQEAAQLQTVA 232 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 + A +A P N + L + +P L W + Sbjct: 233 SLVAC--GFGVALLPESAALANVQPGVCFRPL-------RDVAAPLPLYLAWRAG-DGSL 282 Query: 303 KIVWLRETI 311 L E + Sbjct: 283 ARQRLLEWL 291 >UniRef50_A9HWS6 Transcriptional regulator, LysR-family n=1 Tax=Bordetella petrii DSM 12804 RepID=A9HWS6_BORPD Length = 320 Score = 222 bits (568), Expect = 1e-56, Method: Composition-based stats. Identities = 47/309 (15%), Positives = 99/309 (32%), Gaps = 22/309 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +DL L + + S +AA+ +++ A+S S+ KL L G+S TP Sbjct: 7 IDLRQLRQFVTIAELGSYRRAAEALHIAQPALSVSIQKLEHSVGVLLLERGAKGVSLTPA 66 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNALSKQIYQRYPQA 126 ++ + + ++ + L ++L RYP Sbjct: 67 GAALMDDARRALFHADQARQSARRVALGELGRLRLGFVGSATYMLLPRCLPAFRHRYPDV 126 Query: 127 TIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 ++LR + + E+D G ++ V+ D + L Sbjct: 127 ELELREDSTVRLAEMLRANELDAGLVRGPLAE---------DTSLSAWVVERDSLILALP 177 Query: 186 KDHPALHQTWNLDTFLRYPHISICWE--QSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 HP +L P + + + ++ G I+ + + + Sbjct: 178 AAHPLAGGPVSLQAVRSEPFVMYAPDKVPGLYGVAQALCRKAGFSPRISQEAIQVQTLVS 237 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 + A L +A P + Y+ H + + + +L+ H+ S P Sbjct: 238 LVAS--GLGVALVPGVTRAYSTPHVV------FADLLDADARDALALSLVAHRDTSCAPV 289 Query: 304 IVWLRETIK 312 + LR+ + Sbjct: 290 LK-LRDVML 297 >UniRef50_P42722 HTH-type transcriptional regulator cfxR n=9 Tax=Betaproteobacteria RepID=CFXR_RALEH Length = 317 Score = 222 bits (568), Expect = 1e-56, Method: Composition-based stats. Identities = 36/321 (11%), Positives = 85/321 (26%), Gaps = 22/321 (6%) Query: 1 MKKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPL 60 M + L L L + + S +AA+ +++T AVS + +L + LF Sbjct: 1 MSSFLRALTLRQLQIFVTVARHASFVRAAEELHLTQPAVSMQVKQLESVVGMALFERVKG 60 Query: 61 GLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQ-TPRGLKFELAAESPLMMIMLNALSKQI 119 L+ T + + + + + + S L Sbjct: 61 QLTLTEPGDRLLHHASRILGEVKDAEEGLQAVKDVEQGSITIGLIST-SKYFAPKLLAGF 119 Query: 120 YQRYPQATIKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSD 178 +P +++ + + L + +D+ GR E + + Sbjct: 120 TALHPGVDLRIAEGNRETLLRLLQDNAIDLALMGRPPRELDA----------VSEPIAAH 169 Query: 179 VPCVWLRKDHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPE 237 + HP + ++L + + + ++ ++L Sbjct: 170 PHVLVASPRHPLHDAKGFDLQELRHETFLLREPGSGTRTVAEYMFRDHLFTPAKVITLGS 229 Query: 238 FEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKR 297 E + L + L L + + +E + + Sbjct: 230 NETIKQAVMAGMGISLLSLHTL--------GLELRTGEIGLLDVAGTPIERIWHVAHMSS 281 Query: 298 NSHNPKIVWLRETIKNLYASM 318 +P R + A Sbjct: 282 KRLSPASESCRAYLLEHTAEF 302 >UniRef50_B4UKP3 Transcriptional regulator, LysR family n=4 Tax=Anaeromyxobacter RepID=B4UKP3_ANASK Length = 311 Score = 222 bits (568), Expect = 1e-56, Method: Composition-based stats. Identities = 46/311 (14%), Positives = 98/311 (31%), Gaps = 22/311 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +DL L ++++ T+AA ++VT AVSK++ L PL PT Sbjct: 1 MDLRGLGAFVEVVRQGGFTRAAAALHVTQPAVSKAVRALEDEIGVPLLERGARRTVPTEA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 ++ + + D+ + + + + QRYP Sbjct: 61 GRAVLARAEGVLAAVRAIEDEVADLGALRRGRARVGLPPMVSGAFFPPVLAAYRQRYPGI 120 Query: 127 TIKLRNWDYDSLDAI-TRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 ++LR ++A+ G +D+G + + + DV L Sbjct: 121 QLELREEGAREVEALVASGALDVGVTVLPTDEA----------RFEALPFVHDVLAAVLH 170 Query: 186 KDHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 P + L P + + + + + + G +A +++ Sbjct: 171 PASPLARRPRLALADLAGTPFLLYRADFALRGRILDACRAAGFSPQVASETGQWDFMAA- 229 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 ++ +A PR Q+ +V L + L+W + + + Sbjct: 230 -MAAADVGVALLPRTICRRLDPAQVAVVPL-------AAPAIGWNLGLIWRREGTLSAAA 281 Query: 305 VWLRETIKNLY 315 ET + + Sbjct: 282 RAFVETAREVL 292 >UniRef50_C9NXV6 Transcriptional regulator LysR family n=1 Tax=Vibrio coralliilyticus ATCC BAA-450 RepID=C9NXV6_9VIBR Length = 303 Score = 222 bits (568), Expect = 1e-56, Method: Composition-based stats. Identities = 69/320 (21%), Positives = 125/320 (39%), Gaps = 22/320 (6%) Query: 1 MKKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPL 60 M +I+ ++L+ L LQ++ + +++T+A +R +T SAVS +L KLR F+D L + Sbjct: 1 MS-NISDIELSQLRLLQIIFETKNLTQAGERAGLTQSAVSHTLKKLRHSFNDSLVIRQGN 59 Query: 61 GLSPTPLMVSMEQNLAEWMQMSNL--LLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQ 118 + TP S++ +L W+ L + F +A + I+ LS+ Sbjct: 60 KMVLTPRAESLQTSLGRWLNDFERNILFQEVFDPLTSDRTFYIATSDLVEHILAPHLSRH 119 Query: 119 IYQRYPQATIKLRNWD-YDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFS 177 + P I R + I GEVD ++ S + L+ Sbjct: 120 FGRIAPNIRIVFRKIEKRALASQIESGEVDFAI----------SVIDSTHPNLMVRTLYR 169 Query: 178 DVPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPE 237 D +R HP L+ F +YPH+ + +D+ L+ LG R + + Sbjct: 170 DDFVSVVRAGHPLLNSKIKAKDFCQYPHVLASTGNDNRGMVDDALEGLGLSRVMQYKVAN 229 Query: 238 FEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKR 297 F + ++ D +L A + + P+ + + WH + Sbjct: 230 FSSAPYIVESSDAILTA-PRTFVDLIAGKFNVSSFTPPVELE-------SYAMKMYWHIK 281 Query: 298 NSHNPKIVWLRETIKNLYAS 317 N + W RE I + A+ Sbjct: 282 NKDDQANRWFREQIAEITAA 301 >UniRef50_Q0TQC8 Transcriptional regulator, LysR family n=10 Tax=Clostridium RepID=Q0TQC8_CLOP1 Length = 294 Score = 222 bits (568), Expect = 1e-56, Method: Composition-based stats. Identities = 42/308 (13%), Positives = 93/308 (30%), Gaps = 21/308 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++ L + ++TK AK + ++ ++S+++A+L + D LF L T Sbjct: 1 MNFRKLKIFFETAKCLNMTKVAKSMYISQPSISQAIAELESDLDVKLFDRIGKRLYLTHE 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQ-TPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + + + K + A + + + +L L K+ + + Sbjct: 61 GEVYFEYSRRILNLYEEANSTIRSSKEGQKGKIVIGASTTIGIYILPELIKEFNELHKNI 120 Query: 127 TIKLRNWDYDSLDAI-TRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 I L + ++ + +VDI ++ + D Sbjct: 121 EISLIIENTQLIEELIMENKVDIALVEGYV----------KSDELEVFDIGKDELIFIAN 170 Query: 186 KDHP-ALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 ++P L I ++N L G + M L E + + Sbjct: 171 PNNPIFSKDKITLKDLEDEKFIMREPGSGTREIIENYLINKGCNYNVYMELGNTEAIVRV 230 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 L +A L + + K+ L++HK + + Sbjct: 231 VET--GLGIACVSCKAIDERINEGL------IKEIKIDDIKVSRDLYLIYHKDKFISKNL 282 Query: 305 VWLRETIK 312 + IK Sbjct: 283 EIFIDKIK 290 >UniRef50_B2JL76 Transcriptional regulator, LysR family n=10 Tax=Burkholderia RepID=B2JL76_BURP8 Length = 335 Score = 222 bits (567), Expect = 1e-56, Method: Composition-based stats. Identities = 42/318 (13%), Positives = 103/318 (32%), Gaps = 28/318 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +D+ L ++ S++KAA+R+ V ++S+ + L A L + SP G++PT Sbjct: 1 MDVRQLKYFVTIVDSCSLSKAAERLFVAQPSLSQQILNLEAELKAQLLIRSPQGVAPTEA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNALSKQIYQRYPQA 126 ++ + + ++ + + + + + + ++ L +++ Q+YP Sbjct: 61 GKALYRLSRDVLRRMDQIRQEVQDGGGSESGTVAIGFPTTIASVLAAPLFQRVRQKYPGI 120 Query: 127 TIKLRN-WDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 +++ + + G +D+ R++ + LF + V Sbjct: 121 RLQIFESMSGYITELLANGRLDLAILFRDTESL----------GVSVHPLFDEDLYVV-- 168 Query: 186 KDHPALH-----QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQ 240 HP + L P ++ ++ + I + Sbjct: 169 -GHPVSKLCVDDEVCPLKFLGNVPLVTPGPTNGLRLLIERTFSRADVDLNIVADIDSLPT 227 Query: 241 SLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 L +A + P + P + + P +L W+ Sbjct: 228 MLDIAES--GVACTVLPASALARRHFNN------RPPIRKIVDPGMNRPASLCWNNAVPT 279 Query: 301 NPKIVWLRETIKNLYASM 318 +R + L A + Sbjct: 280 IAATQVVRSAMIELIAEL 297 >UniRef50_Q7WNE4 LysR-family transcriptional regulator n=1 Tax=Bordetella bronchiseptica RepID=Q7WNE4_BORBR Length = 293 Score = 222 bits (567), Expect = 1e-56, Method: Composition-based stats. Identities = 40/314 (12%), Positives = 97/314 (30%), Gaps = 26/314 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +DL L L +E +AA R++++ +S ++ L LF + ++ T Sbjct: 1 MDLRQLKYFVALAEELHFRRAAARLSISQPPLSHAIKLLEEELGTALFERTTKSVALTSA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQ-TPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + + + + + +++ L + + QR P+ Sbjct: 61 GQAFYPEALKVLAQLQVACAVTREVGAGKRGHLRIGFVGGMLLRGLPEIVRDYAQRNPEV 120 Query: 127 TIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + L + AI RG++ GF L ++ +V+ + + Sbjct: 121 IVTLHETSSAEQAKAIARGQLSAGFL----------HAGLLAPELEGQVIRDEPFVACVP 170 Query: 186 KDHPALHQTW-NLDTFLRYPHISICWE--QSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 +DH + ++ + + ++ + + G I + + +L Sbjct: 171 RDHRLAGRRVIDVRQLAGEDMVLFARDVSPGYYDSVIALCMDAGFSPRIRHEVAHWLTAL 230 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 + ++ + L P + + L L A W + S +P Sbjct: 231 LLISRGGGVALVPDPFVDAGLDGVRYLRLKACDSRSYA----------HFAWKRDAS-DP 279 Query: 303 KIVWLRETIKNLYA 316 + Y Sbjct: 280 LLREFVAFALRRYR 293 >UniRef50_C7MTU9 Transcriptional regulator, LysR family n=3 Tax=Actinomycetales RepID=C7MTU9_SACVD Length = 319 Score = 222 bits (567), Expect = 1e-56, Method: Composition-based stats. Identities = 52/315 (16%), Positives = 105/315 (33%), Gaps = 24/315 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L + +ER+ T+AA+R++V+ S +S + +L LF S ++ TP Sbjct: 1 MELRQLEYFVAVAEERNFTRAAERVHVSQSGISAQIRQLERELGATLFDRSTRTVTLTPA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTP-RGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + + + + T + + + L ++ +P Sbjct: 61 GRAALDHARAALAAAAAVDQAVSDVTGLLRGRLTVGMVIGCTLTPLFDALAAFHRAHPGV 120 Query: 127 TIKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + L + D +D + G +D+ G + P ++ + S+ + Sbjct: 121 ELSLWEDNSDRLVDGVRAGTLDLALVG---------AAGAPPHDLNALTIISEPLVAVVP 171 Query: 186 KDHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 HP Q +L + +P + D G E TI + + Sbjct: 172 PGHPLATQPQVSLGDLVDHPLACMPPGTGLRAVFDEACTVRGIEPTITWEASAADALAEL 231 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 + L +A + + L ALPL + L+W NP + Sbjct: 232 TFRE--LAVAVLSESMATHYRD---RLTALPLD-----DVDIPALLALVWKPST--NPAL 279 Query: 305 VWLRETIKNLYASMA 319 L E + + A Sbjct: 280 HALIEHCEQAFGESA 294 >UniRef50_A4WZV0 Transcriptional regulator, LysR family n=1 Tax=Rhodobacter sphaeroides ATCC 17025 RepID=A4WZV0_RHOS5 Length = 302 Score = 222 bits (567), Expect = 1e-56, Method: Composition-based stats. Identities = 43/308 (13%), Positives = 85/308 (27%), Gaps = 22/308 (7%) Query: 9 DLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLM 68 L L + + S T+AA+ +++T AV + +L L L T Sbjct: 4 TLRQLQVFASVARHASYTRAAEELHLTQPAVFAQVKQLEEALAVVLIERIGKRLHLTEAG 63 Query: 69 VSMEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQIYQRYPQAT 127 ++E E ++ L + + ++A S + L L + P Sbjct: 64 RAVEATARETLEGIERLEMQLADLQGLRRGRLKIAIVSTV-QYFLPRLLGEFCTLNPGIE 122 Query: 128 IKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRK 186 + L + + + E D+ G+ + + + + Sbjct: 123 VALTVTNRQTVIARLAANEDDLCILGQPPEGL----------DVVATPVAQNPILLLAPA 172 Query: 187 DHPALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMA 245 DHP + P I A + + G + M L E Sbjct: 173 DHPLAGARAVPFAELAEAPFILREPGSGTRAAAERFFADCGVRPRVRMELGSNEAIKEAV 232 Query: 246 AQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIV 305 A L + + LVAL + Q L + + + + + Sbjct: 233 AAGLGLAILSQDTMAVEAATR---RLVALDV-----QGFPLMRVWNVAYPRGKHLSVAAA 284 Query: 306 WLRETIKN 313 + Sbjct: 285 AFLAHLTQ 292 >UniRef50_Q0S8J9 Transcriptional regulator, LysR family protein n=5 Tax=Actinomycetales RepID=Q0S8J9_RHOSR Length = 298 Score = 222 bits (567), Expect = 1e-56, Method: Composition-based stats. Identities = 39/311 (12%), Positives = 99/311 (31%), Gaps = 29/311 (9%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++++ + + +E +AA+R++ +S+++ +L LF + + T Sbjct: 1 MEISQITAFLAVAEELHFGRAAQRLHSAQPPLSRTIRQLEKQLGATLFERNTRNVRLTSA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQ-TPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 ++ E + L + + + +++ +K + +P Sbjct: 61 GEALLGPAREILDACRLAEIAVAAAGRGQVGRVRIGFAGVSSHLLIGRWAKLVRHTHPGI 120 Query: 127 TIKLRNW--DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 L + ++L+ + G +DIG P I V+ ++ V L Sbjct: 121 EFVLDSSAFASEALNKLLDGTLDIGLVR----------WIFTPPGIASRVILNEDFVVAL 170 Query: 185 RKDHPALHQ-TWNLDTFLRYPHISIC--WEQSDTWALDNVLQELGRERTIAMSLPEFEQS 241 DHP + ++ P +++ + +L + G I S P+ Sbjct: 171 PTDHPLAGRDGVRIEELSTEPWVTLPADPGSALRDSLQRAAHDAGFTPRIVQSAPDSMAL 230 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 + + + L + + L + + W + + Sbjct: 231 MALVSAEVGCALTV--SSVAENVNNPDVVFLPL-------VGGPSTLQLRIAWRADDDN- 280 Query: 302 PKIVWLRETIK 312 LRE ++ Sbjct: 281 ---AALREVLR 288 >UniRef50_B5GKV4 LysR-family transcriptional regulator (Fragment) n=20 Tax=Streptomyces RepID=B5GKV4_9ACTO Length = 328 Score = 222 bits (567), Expect = 1e-56, Method: Composition-based stats. Identities = 41/303 (13%), Positives = 82/303 (27%), Gaps = 25/303 (8%) Query: 13 LLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSME 72 L + + VT+AA + + S +S+SLA+L LF L+ TP + Sbjct: 36 LAHFAGVARSEHVTRAAHEMRMPQSTLSRSLARLEEDLGVALFARRGRTLALTPAGRTFL 95 Query: 73 QNLAEWMQMSNLLLDKPH-HQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQATIKLR 131 + + ++ P K L + L + +P L Sbjct: 96 TGVERALGEVERAAEEVRADADPAAGKVAFGFLHTLGPETVPGLLRAFRADHPGVRFSLV 155 Query: 132 NW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPA 190 L+ + GE+D+ + + + + + +DHP Sbjct: 156 QNYGEAMLERLRAGELDLCLTSPVPQEP----------GLVARRVDEQRLHLVVPEDHPL 205 Query: 191 -LHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQPD 249 + L +++ D++ G IA E E + A Sbjct: 206 AARRRVRLAEAAGETFVTLEPGYGLRRITDDLCARAGFRPRIAFEGEEAETLRGLVAAGL 265 Query: 250 NLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWLRE 309 + L P + + L W + + + Sbjct: 266 GVALLPPPAVPRPGVVQLG------------ITAPRAVREIGLAWREGAPDTAPVAAFKR 313 Query: 310 TIK 312 + Sbjct: 314 FLL 316 >UniRef50_C6D056 Transcriptional regulator, LysR family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D056_PAESJ Length = 296 Score = 222 bits (567), Expect = 1e-56, Method: Composition-based stats. Identities = 45/318 (14%), Positives = 92/318 (28%), Gaps = 34/318 (10%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L Q + + +T+AA+ ++++ A+SK++A L A LF + + Sbjct: 1 MELLQLKYFQTTARLQHMTQAARHLHISQPALSKTIASLEAELGVKLFERTNKSIRLNEH 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPR-----GLKFELAAESPLMMIMLNALSKQIYQR 122 + + +Q + L + +L L + + Sbjct: 61 GIHFLSKVDIALQALEDGKRELQDLVESPSEYITLDVRV------SSHLLPGLLAEYRKS 114 Query: 123 YPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCV 182 P L +L + + D+ S P L + V Sbjct: 115 KPDTQFHLLQ---HALPSEHAFDFDLCLSDGAVP----------PPGCHSVALLREKIVV 161 Query: 183 WLRKDHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQS 241 L +H +L+ IS+ +S D + G I + Sbjct: 162 ALPSEHRLAKRDRISLEELKEERFISLPPGKSLRETTDAFCRLAGFTPHIQFESDDPATV 221 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 + L + +V +PL ++ E +L W K Sbjct: 222 RGLIRAGQGLAFLP----AITWGGSTGSDVVTIPL-----KEGYCERSISLHWPKGRYLT 272 Query: 302 PKIVWLRETIKNLYASMA 319 R+ ++ +A Sbjct: 273 QAAASFRDCTTRYFSELA 290 >UniRef50_D0J615 Transcriptional regulator, LysR family n=2 Tax=Comamonas testosteroni RepID=D0J615_COMTE Length = 306 Score = 222 bits (567), Expect = 1e-56, Method: Composition-based stats. Identities = 53/321 (16%), Positives = 106/321 (33%), Gaps = 23/321 (7%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 L L + L Q +S +AA ++++ SA+S +A++ A LF + + Sbjct: 1 MVDANLSTKDLRAVVALSQTKSFGQAALLVHLSQSALSALIARVEAQIGARLFERTTRAV 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHH-QTPRGLKFELAAESPLMMIMLNALSKQIYQ 121 T + E ++ + L R +AA L +L + + + Sbjct: 61 ELTDAGHVFIAHAQEILRDTQRALRAVTDTVQLRTGSVTVAALPSLAASLLPKVFAEFTR 120 Query: 122 RYPQATIKLRN-WDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 +P + L + + D + G+VD + + + YE L D Sbjct: 121 IHPGVRLSLLDTLSGPAFDLVRDGKVDFALTAADPKQ----------EDLAYEQLMEDQF 170 Query: 181 CVWLRKDHPALH--QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEF 238 + DHP ++ L YPH+S+ S +D L G + Sbjct: 171 FLICPDDHPLSKHAGPVAIENTLDYPHVSMPSSASVRQYIDADLHSKGLYFAPVFEVDHI 230 Query: 239 EQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRN 298 + + L ++ P Q +L + L ++ P ++ + Sbjct: 231 ATIGALVSA--GLGISALPETAVSLLQAGRLVQIPL-------SPPGIQRPLGMVMRRHA 281 Query: 299 SHNPKIVWLRETIKNLYASMA 319 + L I+ ++A Sbjct: 282 PRSSAAKALEALIRASLHNLA 302 >UniRef50_C6PQ28 Transcriptional regulator, LysR family n=2 Tax=Firmicutes RepID=C6PQ28_9CLOT Length = 297 Score = 222 bits (567), Expect = 1e-56, Method: Composition-based stats. Identities = 38/314 (12%), Positives = 94/314 (29%), Gaps = 26/314 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L Q + +++AA+++ + ++SK+++ L LF + Sbjct: 1 MELLQLRYFQTVAHLEHMSRAAEQLRIPQPSLSKTISLLEKDLGVLLFDRRGKYIYLNQY 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + + + + + + + + +LA +L L ++YP Sbjct: 61 GKAFLRRVDQALAALEDGRHELNDLSGKTFGDVKLAVL--AASNLLPDLLSSFCKQYPHI 118 Query: 127 TIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRK 186 L +S+ + D+ S ID L ++ + + Sbjct: 119 NFNLIQHFSNSITR---PDFDLCISSSPVKL----------NDIDSIPLITEEIFLAVPI 165 Query: 187 DHPALHQ-TWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMA 245 +HP + + L IS+ + D G + + + Sbjct: 166 EHPLAKRSSIKLTEVANDGFISLRRGKKLREITDTFCSYAGFTPHVIFESDDPATVRGLI 225 Query: 246 AQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIV 305 +A P + +V L + + +L + Sbjct: 226 RA--GQGVAFIP--AVSWGGSTGSSMVLLHIE-----EPVCRRTISLTYKAERYLPKAAR 276 Query: 306 WLRETIKNLYASMA 319 R+ + +A +A Sbjct: 277 LFRQFTIDYFAKLA 290 >UniRef50_A4A328 Transcriptional regulator, lysr family protein n=1 Tax=Blastopirellula marina DSM 3645 RepID=A4A328_9PLAN Length = 301 Score = 222 bits (567), Expect = 1e-56, Method: Composition-based stats. Identities = 40/309 (12%), Positives = 90/309 (29%), Gaps = 21/309 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L + S T+ A + S+V+ + +L PLF L+ T Sbjct: 1 MELKTLATFRAAAATLSFTQTAAALGYVQSSVTAQVQQLERELGVPLFDRIGNRLALTEA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQAT 127 + + +++ P ++ ++ +L ++ + Q++P Sbjct: 61 GQRLVGYADRLLALADEARAAVSTTAPV-GTLSISGPETIVSYLLPSILAKFRQQHPAVW 119 Query: 128 IKLRNWD-YDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRK 186 ++ + + G++D F +P +++ L + + Sbjct: 120 VRCVPSPIGELKRRVLDGQLDAAFV---------LEEPVVPGSLNVAPLRPEPLALIAAP 170 Query: 187 DHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRER-TIAMSLPEFEQSLFM 244 HP + + P + + + L A E Sbjct: 171 SHPLVKKRRVQARDLAGEPILFTETGCTYRNKFEQALHAAHAHPGQKAQEFSSVEAIKRY 230 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 A L +A P + + L +L V L+W +P + Sbjct: 231 VAA--GLGIAALPSVAVEAERKSRT------LAVLAWDGPQLTVHTQLVWSATRWTSPAL 282 Query: 305 VWLRETIKN 313 ET+ Sbjct: 283 SAFVETVMA 291 >UniRef50_A5VEA0 Transcriptional regulator, LysR family n=1 Tax=Sphingomonas wittichii RW1 RepID=A5VEA0_SPHWW Length = 309 Score = 222 bits (567), Expect = 1e-56, Method: Composition-based stats. Identities = 63/318 (19%), Positives = 127/318 (39%), Gaps = 13/318 (4%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 + LDLNLL+ L L E++VT+AA+RIN++ +S +L KLR F DPL + Sbjct: 1 MHLRGLDLNLLIALDALFTEKNVTRAAERINISQPGMSAALQKLRWHFSDPLLERVGRRM 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTP--RGLKFELAAESPLMMIMLNALSKQIY 120 T ++ + E + L DKP P F + A + I+ L +I Sbjct: 61 ELTVRGRALADPVREILIKVRDLTDKPEEFDPATARRVFRIGATTFCSDILAAPLLCRIE 120 Query: 121 QRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 + P +++ + D++ + G++D + L S ++D F+D Sbjct: 121 RIAPNISVQFEDLATDTVHRLVDGQLDFAITISARILSDEVNLDSSLSSLDL---FTDAF 177 Query: 181 CVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQ 240 + + + + D P+I + + + ++ ++ I LP F+ Sbjct: 178 VLVTSRQNSRVGDAVTFDQLCELPYIETRFGNVIAGISEQMWRQQPKQPQIRAWLPNFQL 237 Query: 241 SLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 +L + D + + Q + + + + +P+ +++ L WH+RN Sbjct: 238 TLDTVSHTDMVAIVPL-HLAQLHGDRYNVRTLPVPVEMPTIEER-------LFWHQRNDQ 289 Query: 301 NPKIVWLRETIKNLYASM 318 + W + ++ Sbjct: 290 DAGHSWFKGLLQETVQGF 307 >UniRef50_B9MIR3 Transcriptional regulator, LysR family n=4 Tax=Burkholderiales RepID=B9MIR3_DIAST Length = 299 Score = 222 bits (567), Expect = 1e-56, Method: Composition-based stats. Identities = 46/314 (14%), Positives = 88/314 (28%), Gaps = 24/314 (7%) Query: 7 TLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTP 66 + L L + SV+ AAK ++VT S L ++ PL+ + T Sbjct: 2 NITFRQLRLFLALAETGSVSAAAKLMHVTQPTASMQLREVAQAVGVPLYEVVSRRVYLTE 61 Query: 67 LMVSMEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNALSKQIYQRYPQ 125 ++ + + + ++A S + L + +PQ Sbjct: 62 AGQALARTARAIASEWDAFEQGISGAKGLTSGRLKVAVVST-AKYFVPRLLGSFCKLHPQ 120 Query: 126 ATIKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 I L + D + + + D+ ++ VL + V Sbjct: 121 IDISLEVLNRDHVITRLRANQDDLYVMSMPPGDLP----------LEDHVLMPNPLVVIA 170 Query: 185 RKDHPA-LHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 H + L I A D L++LG + L E Sbjct: 171 PAGHRLAAKKRVALPQLQSERFILREKGSGTRMATDAHLRQLGFAPAAVLELGSNEAIKE 230 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 L ++ R+ + L Q ++ + L+W K +P Sbjct: 231 SVQGQ--LGVSIVSRHALGPHLDG--------LAILNVQGFPIQSQWHLVWPKGKRLSPI 280 Query: 304 IVWLRETIKNLYAS 317 R + + A Sbjct: 281 AEVFRGHLMDEAAG 294 >UniRef50_C9RA29 Transcriptional regulator, LysR family n=1 Tax=Ammonifex degensii KC4 RepID=C9RA29_AMMDK Length = 295 Score = 222 bits (567), Expect = 2e-56, Method: Composition-based stats. Identities = 43/309 (13%), Positives = 92/309 (29%), Gaps = 24/309 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 + L+ L L+ + S + AAK +++T AVSK +A L A L ++ T Sbjct: 1 MKLSWLKTFVLIADKGSFSLAAKELDLTQPAVSKHIALLEAHLGVKLIDRDQRQVTLTEA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQ-TPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 ++ ++ + + A + +L L ++ +RYPQ Sbjct: 61 GQALLPYARTIIKTLEEAEQAVRNLSASVRGTLNIGASTIPGHYVLPQLIRRFRERYPQV 120 Query: 127 TIKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + L D + + ++ +G G + ++ +D + L Sbjct: 121 QVNLEIADTEKVWQQVLEHKICLGAVGAPPSSPA----------LEAVPFATDEIVLVLP 170 Query: 186 KDHPALHQTW-NLDTFLRYPHISICWEQSDTWALDNVLQELGRER---TIAMSLPEFEQS 241 HP + L+ + + ++ L++ G + E Sbjct: 171 TPHPLAGKEVIPLELLPQLELVGREKGSGTRQTVEERLRQKGFPPERLRVVAEFSTTEAV 230 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 L L A R+ + L + E L++ + + Sbjct: 231 LAAVEA--GLGGAFVSRWAAESRRHKG------NLCICRLEGISFERKLYLVYSRHRTLP 282 Query: 302 PKIVWLRET 310 Sbjct: 283 HLARLFLNF 291 >UniRef50_A1S338 Transcriptional regulator, LysR family n=16 Tax=Shewanella RepID=A1S338_SHEAM Length = 302 Score = 222 bits (567), Expect = 2e-56, Method: Composition-based stats. Identities = 51/322 (15%), Positives = 101/322 (31%), Gaps = 28/322 (8%) Query: 1 MKKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPL 60 M I L C L + S T+AA+++++T +SK L +L + L + + Sbjct: 1 MNIPIKN-----LHCFVTLAETGSFTRAAEKLHLTQPTLSKMLQRLEDHWQQQLIIRNNQ 55 Query: 61 GLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTP-RGLKFELAAESPLMMIMLNALSKQI 119 LS T + ++ E + +LL + + + L + +++ L Sbjct: 56 KLSLTQAGELLLEHAREMLGQWHLLEEDLSNLRGVQRGYLRLGVCPMMSSLVI-ELLTAF 114 Query: 120 YQRYPQATIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSD 178 RYP +++ + A+ +DI F+ + + + L + Sbjct: 115 RARYPGVRLEMFEYGGFGCEKALLANNLDIAFTALPATHA---------DELTAQPLTAY 165 Query: 179 VPCVWLRKDHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPE 237 L H + F +P I + + LD++ + G E +A + Sbjct: 166 PLLACLPAGHKLANKAALDWCDFGSHPFIMYNQDFALAKLLDSLARNAGVELNVAYRSGQ 225 Query: 238 FEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKR 297 ++ M L A P L L L+W Sbjct: 226 WDFLASMVEANMGL--AILPAPICEKLTDKALCFRPL--------SGGHTWDLALIWRSH 275 Query: 298 NSHNPKIVWLRETIKNLYASMA 319 P ++ + A Sbjct: 276 LHLTPAAAAFLALSRDRGQATA 297 >UniRef50_B4CZS1 Transcriptional regulator, LysR family n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CZS1_9BACT Length = 305 Score = 222 bits (567), Expect = 2e-56, Method: Composition-based stats. Identities = 47/309 (15%), Positives = 100/309 (32%), Gaps = 21/309 (6%) Query: 14 LCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSMEQ 73 L + S +KAA +T SAVS+ + L F L + T + + Sbjct: 7 KVFCDLAETGSFSKAAVLNAITQSAVSQQIRALENKFQVTLVERGRRNFALTAEGNAFLE 66 Query: 74 NLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQIYQRYPQATIKLRN 132 E +++ N L + H + +AA + + L + K +++P + + Sbjct: 67 ASREILEVYNNLDHRLHELRDVIAGELRIAAIYSIGLHELPSHLKAFREKFPDVELHVEY 126 Query: 133 WDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPAL 191 + + G+VDIG + + E+ D + +HP Sbjct: 127 RRSQQVYTQVLGGDVDIGLVAFP----------TKRNGLQIEIFSEDKLVLICHPNHPLA 176 Query: 192 HQ-TWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQPDN 250 + ++ I+ + +D ++ E AM E Sbjct: 177 GRKKIKIEELNGEKFIAFEPDLPTRKVIDRHFRDHQIEIEHAMEFDNIETVKRAVEIESG 236 Query: 251 LLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWLRET 310 ++ PR + L + + K+ P +L + + +P Sbjct: 237 --VSIVPRNTVRQEVESGV------LSALDIEGPKMSRPLGILTKRNRARSPAHKEFVAA 288 Query: 311 IKNLYASMA 319 +K +A+++ Sbjct: 289 LKRDFAALS 297 >UniRef50_A5W561 Transcriptional regulator, LysR family n=12 Tax=Proteobacteria RepID=A5W561_PSEP1 Length = 317 Score = 222 bits (567), Expect = 2e-56, Method: Composition-based stats. Identities = 55/312 (17%), Positives = 96/312 (30%), Gaps = 21/312 (6%) Query: 9 DLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSP-LGLSPTPL 67 L L ++ SV +A++++ + ++S ++ L F LF+ G+S TP Sbjct: 21 TLRQLKYFVTTVEAGSVAEASRQLYIAQPSISTAIKSLEESFGVQLFIRHHAQGVSLTPS 80 Query: 68 MVSMEQNLAEWMQMSNLLLD-KPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 +QM++ + ++ + + L L QRYP Sbjct: 81 GKRFYAKTKSLLQMAHEFEQNALADNDTVAGQIDIGCFETVAPLYLPRLIAGFRQRYPGV 140 Query: 127 TIKLRNWD-YDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 I+LR+ + D + +T G D+ F + E +P P V L Sbjct: 141 DIRLRDGEQQDLIQGLTAGTFDLAFLYDHDLDGTIEAEPLMPP---------QKPYVLLP 191 Query: 186 KDHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 ++H Q +L P I + S ++ E+G I S P E M Sbjct: 192 ENHRFAGQAQVSLRDLCPEPMILLDVAPS-RTYFVSLFNEMGLAPNIVFSSPSIEMVRGM 250 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 + L L + + W KR Sbjct: 251 V--GQGFGFSLLVTRPHSEYTYDGQRLAMLDIAEPVALSG-----LAAAWLKRVQLTKPA 303 Query: 305 VWLRETIKNLYA 316 E + A Sbjct: 304 QLFVEFCREELA 315 >UniRef50_A7IMC0 Transcriptional regulator, LysR family n=18 Tax=Proteobacteria RepID=A7IMC0_XANP2 Length = 320 Score = 222 bits (567), Expect = 2e-56, Method: Composition-based stats. Identities = 52/309 (16%), Positives = 100/309 (32%), Gaps = 23/309 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++ L ++++ ++AAK + + SAVSK++ +L A PL TP Sbjct: 27 MEFRPLRSFVEVVRQGGFSQAAKAVLTSQSAVSKAVKQLEAEVGVPLLDRMGHRSVLTPA 86 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + + + LL + L + L QR+P+ Sbjct: 87 GEVVYRRAVKLLADRADLLAELDEIRGLRRGVLRLGLLPACSSVPFTPLLALYRQRFPEI 146 Query: 127 TIKLRNWDYDSLD-AITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 ++L D L+ + G++DI L + D+E L + L Sbjct: 147 EVRLVERDSAQLEDDLRTGDIDIA-----------GSLLPISPEFDFEPLCREPLVAVLP 195 Query: 186 KDHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 HP L P I + + + + + G IA + + ++ + Sbjct: 196 SGHPLATQAEIRLADLRDTPFIMLESGLALHRIVLDASRRAGFLPAIAARSSQIDFTMEL 255 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 AA L +A PR + V L + LE + W + + Sbjct: 256 AAA--GLGVAFLPRMIAAQRHDAAVCQVRL-------AEPDLEWSMAMAWRRGAYLSDAA 306 Query: 305 VWLRETIKN 313 ++ Sbjct: 307 SAWLALVRE 315 >UniRef50_UPI0000E0F9F3 Transcriptional Regulator, LysR family protein n=1 Tax=Rhodobacterales bacterium HTCC2255 RepID=UPI0000E0F9F3 Length = 294 Score = 222 bits (566), Expect = 2e-56, Method: Composition-based stats. Identities = 48/310 (15%), Positives = 104/310 (33%), Gaps = 24/310 (7%) Query: 7 TLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTP 66 +L L ++ Q + +AA +++VT A+S ++ K LF + ++ T Sbjct: 2 SLSFKQLQAFLMMAQSHNFAEAAIKMHVTQPALSSAIKKCEDILGGELFTRTTRTVALTK 61 Query: 67 LMVSMEQNLAEWMQMSNLLLDKPHH-QTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQ 125 + + + + +AA L Q + YP Sbjct: 62 EGEAFLPIAQRLHTEYQDAMAQIQAVFAKQTGTLSVAAMPSFAERYLPEYLYQFHILYPN 121 Query: 126 ATIKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 +IK+ + + +D + G+V+ GF+ H I + LF+D V + Sbjct: 122 ISIKIEDVVVEKVIDLVQEGKVECGFTFEPKHNL----------DITFTPLFTDQFVVVM 171 Query: 185 RKDHPALH---QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQS 241 HP +T L + + + + +D+V +E + I + Sbjct: 172 HASHPLNQPKHRTLTLHDIATFDMVVMNRNSNLRVFIDSVYEEQEITQHIIAEASQIGTL 231 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 + + + +A P+ + L +AL + KL+ ++ + + Sbjct: 232 GQLVKRQ--IGIAIVPQLSSQRMEELGLVCIAL-------NESKLQRKVGIITNPYQQLS 282 Query: 302 PKIVWLRETI 311 E + Sbjct: 283 VTTQAFLEMV 292 >UniRef50_A6VUM5 Transcriptional regulator, LysR family n=2 Tax=Gammaproteobacteria RepID=A6VUM5_MARMS Length = 306 Score = 222 bits (566), Expect = 2e-56, Method: Composition-based stats. Identities = 48/316 (15%), Positives = 103/316 (32%), Gaps = 25/316 (7%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 +++ + L L S T+AAKR N++ A S +A L LF + Sbjct: 1 MNLS---IKQLRAFLALSDHDSFTQAAKRFNLSQPAFSTLIASLEDEIGYRLFDRDTRKV 57 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKP-HHQTPRGLKFELAAESPLMMIMLNALSKQIYQ 121 + + + + +++ + + L+ L + L + Q Sbjct: 58 ELNANGIHFIEIARRLILDYDEAINEIEARASGKNGTLTLSVLPSLAVEWLPEILAQYST 117 Query: 122 RYPQATIKLRNWDYDS-LDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 +PQ IKL + ++ L +I + D+ + + D LFSD Sbjct: 118 MHPQTQIKLNDTQWNQCLKSIVNSQADLALTASQPATNI----------FDSHYLFSDKF 167 Query: 181 CVWLRKDHPALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFE 239 + +HP + L +YP I S D + + G+ ++ + + Sbjct: 168 YLLCHVNHPLAQNKKVKLSDLYKYPFIGFSQRTSIRQYTDKLFESQGKLIKYSLEVQQLT 227 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 + + + + + + + + +V + LE L+ K + Sbjct: 228 TMMGLISANYGIGIT--SGLTLFQFKHQNIAIVPF-------EDVDLERDIYLVSLKNRA 278 Query: 300 HNPKIVWLRETIKNLY 315 + + I N Sbjct: 279 QPSHVKLFADFIMNEA 294 >UniRef50_B2T513 Transcriptional regulator, LysR family n=65 Tax=Proteobacteria RepID=B2T513_BURPP Length = 305 Score = 222 bits (566), Expect = 2e-56, Method: Composition-based stats. Identities = 41/321 (12%), Positives = 87/321 (27%), Gaps = 34/321 (10%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 + + L+ + + R++++AA ++++ AVS L +L+ F +PL+ G+ TP Sbjct: 1 MTPDQLITFAAVAEHRNISRAAVALHLSQPAVSGQLRQLQDEFGEPLYQRDGRGVRLTPA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + A + +L L ++RYP Sbjct: 61 GEQLASYATRLRDTWRQAHAYRDALRGLEQGTLRIGASTTPASYLLPYLIADFHRRYPDV 120 Query: 127 TIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 T+ + + + A+ VDI LP D + Sbjct: 121 TLHTADGNTTEIVGALDS--VDIAMIEGPVGVD-------LPPDTAVHSWREDEIVAIMP 171 Query: 186 KDHPAL-------------HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIA 232 + HP L F YP + ++ G +A Sbjct: 172 RTHPLAELALSAQSAEVGQGGQAGLAAFGEYPLVLREAGSGVRQIVERAFARAGVPMRVA 231 Query: 233 MSLPEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTL 292 + + E + + L + L ++ Sbjct: 232 LEIAGVEGVKEAVRAGMGIG--FVSAMSMRHEDRA--------LCLLSLSPEPLTRRLSI 281 Query: 293 LWHKRNSHNPKIVWLRETIKN 313 L ++ + + Sbjct: 282 LVPHASAPSRVVEQFLALCLA 302 >UniRef50_Q46Q42 Regulatory protein, LysR:LysR, substrate-binding n=1 Tax=Ralstonia eutropha JMP134 RepID=Q46Q42_RALEJ Length = 297 Score = 222 bits (566), Expect = 2e-56, Method: Composition-based stats. Identities = 48/309 (15%), Positives = 90/309 (29%), Gaps = 24/309 (7%) Query: 7 TLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTP 66 L + L L R+ T+AA+ +++ SA S + L LF + + + Sbjct: 2 NLSVKHLRAFVALATHRNFTRAARACHLSQSAFSALVQTLEEQAGSRLFERTTRHVELSA 61 Query: 67 LMVSMEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNALSKQIYQRYPQ 125 + E+ + + R + +AA + L L QRYP Sbjct: 62 DGMRFEETARRLLGDFEAAFEDLRAHAERRKGRVSIAALPSIAGGDLPPLLAAFRQRYPG 121 Query: 126 ATIKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 ++L + D +D + RG D + + E L D + Sbjct: 122 IALELFDQLADGCIDLVRRGRADFALAPAPVQ----------DDDLRVEPLVHDTFHLVC 171 Query: 185 RKDHPALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 H + P I + S LD L + + M + Sbjct: 172 PTTHVLARKRRITPQMLAGQPFIHLSRTSSVRQHLDAAL--HPLKLSSVMEVEHLATVAA 229 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 + L ++ P + Q L + L Q L L+ + + Sbjct: 230 LVQA--GLGVSVVPSLALFQFQRDGLAVRPL-------QMPSLVRDICLVRLRDRGDSAA 280 Query: 304 IVWLRETIK 312 + + + Sbjct: 281 AAAMIDCLH 289 >UniRef50_A9FB16 Transcriptional regulator, LysR family n=3 Tax=Sorangium cellulosum RepID=A9FB16_SORC5 Length = 349 Score = 222 bits (566), Expect = 2e-56, Method: Composition-based stats. Identities = 73/316 (23%), Positives = 131/316 (41%), Gaps = 20/316 (6%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 + ++D +L++ L L+QERSVT+AA+R+ VT ++S +L++LRA F DPL V + Sbjct: 41 MRLPSVDTHLVVALHALLQERSVTRAARRVGVTQPSMSHALSRLRAHFGDPLLVQVGRQM 100 Query: 63 SPTPLMVSMEQNLAEWMQMSNLL--LDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIY 120 + + + AE ++ + + F L A L +++L L++ + Sbjct: 101 TLSERARDLLPRAAEAVERLEQVFGQAERFDPRRSTRTFRLVATDNLELLVLPPLTRILA 160 Query: 121 QRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 P ++ RN D + + RGE+D +P L ++ Sbjct: 161 AEAPHVNLRCRNIPPDFAELLRRGELDAKLGRGGP----------VPDGCRSTQLAAEQL 210 Query: 181 CVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQ 240 +R+ HPA + + H+ I D +D L G R + +++ F Sbjct: 211 VCLMRRGHPASRKALTAARYAACEHLMISPHGEDHNVIDQELAARGLRRRVTLTVSHFLV 270 Query: 241 SLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 + F+ + D LLL + R + L + PL TL+W +R+ Sbjct: 271 APFILSGSD-LLLTVSARVAVALARKLDLVVRPCPLEAR-------GYTLTLVWPERSEG 322 Query: 301 NPKIVWLRETIKNLYA 316 + WLR I+ A Sbjct: 323 DEGHSWLRAAIERAVA 338 >UniRef50_C0Z633 Transcriptional regulator n=3 Tax=Bacillales RepID=C0Z633_BREBN Length = 293 Score = 222 bits (566), Expect = 2e-56, Method: Composition-based stats. Identities = 43/312 (13%), Positives = 98/312 (31%), Gaps = 27/312 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L + + + + +TKAA+ + + A+SK++A+L PLF + Sbjct: 1 MELLQLHYFRTVAKWQHMTKAAQELRIAQPALSKTIARLEEDVGVPLFDRERGRIRLNTF 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + + + + + + LA + + +L+ + +P Sbjct: 61 GKAYLERVDKALNLLEEGQKVVSDLAGMEHGRIHLATST---LDLLSEPLGKFLALHPDV 117 Query: 127 TIKLRNWDYDSLDAITR-GEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 ++ + + + GEVDI F+ I + + V + Sbjct: 118 HFQITQATMEEMALLLESGEVDICFTHLPIKLP----------DILTTPVLKEDIHVAVP 167 Query: 186 KDHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 + H QT L I + D Q+ G A + + + Sbjct: 168 RTHHLAKQTSIQLSELAEESFIGYREDFPIQMLYDQFFQKAGITPKFACRVDDPGSIQKL 227 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 + ++ LV LP+ + F ++ H++ + Sbjct: 228 VRAGLGIA------LYGCISREEDPHLVMLPIKHP-----ICQRHFQMIRHEKRYLSLAA 276 Query: 305 VWLRETIKNLYA 316 + I +A Sbjct: 277 RQFCDFIVQYFA 288 >UniRef50_B9JZE6 Transcriptional regulator LysR family n=1 Tax=Agrobacterium vitis S4 RepID=B9JZE6_AGRVS Length = 309 Score = 222 bits (566), Expect = 2e-56, Method: Composition-based stats. Identities = 42/322 (13%), Positives = 106/322 (32%), Gaps = 27/322 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L + +E +T+AA+R+ + +S+ + L LF+ P G++ T Sbjct: 2 IELRHLRYAVTVAEEGHLTRAAERLGLQQPPLSQQIKALETEVGVTLFIRQPRGMALTEA 61 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMI-MLNALSKQIYQRYPQ 125 V+ + + ++ ++ + + + + ++ ++ + + P Sbjct: 62 GVAFIARARQILADVDMAVEAAQRAARGEIGELAIGFTTSAVFHPLVPSIVRAMRLSSPS 121 Query: 126 ATIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 ++L + L ++ G +D F + L + E + + + L Sbjct: 122 LKLRLDEGSTTELLCELSAGRLDAAFIR-----ATAGALPGSGPTLSIETVDIEDMVLAL 176 Query: 185 RKDHPAL-------HQTWNLDTFLRYPHISICWE--QSDTWALDNVLQELGRERTIAMSL 235 HP T L + Q + Q G +A Sbjct: 177 PDTHPLALHSQNGDRDTVALAALAGETFVLYRRPLAQGLYDRIIAACQAAGFSPNVAQEA 236 Query: 236 PEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWH 295 P+ +L + A L L+ P+ + + + L+ P +L + Sbjct: 237 PKLVSTLSLVAA--GLGLSIIPQSMARL-ETSGVAYRRF------APGSGLDAPLSLAYR 287 Query: 296 KRNSHNPKIVWLRETIKNLYAS 317 + + + E ++ ++ Sbjct: 288 RDSYRG-ALKTFVEEVRRQVST 308 >UniRef50_B8IVL1 Transcriptional regulator, LysR family n=2 Tax=Proteobacteria RepID=B8IVL1_METNO Length = 318 Score = 222 bits (566), Expect = 2e-56, Method: Composition-based stats. Identities = 43/308 (13%), Positives = 102/308 (33%), Gaps = 20/308 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +DL L +++ + +AA+R+ T A++K + +L A LF S GL+ T + Sbjct: 1 MDLRDLAYFEVIADLGHLGRAAERLGRTQPALTKCIQRLEASVGAELFARSSRGLALTQV 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQ-TPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + L + + + + +L + + + P Sbjct: 61 GEVLLARARRMRTAMDEALREVSDFAAGAAGHVRIGTGATMAEYLLPQVCRALIAAAPAV 120 Query: 127 TIKLRNWDYDSLD-AITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 T++L+ L A+ ++D+ +L+S + +D V Sbjct: 121 TVELQIGMSGVLRTALRDNQLDLIIGP---------VLASDHDEFAHVTFGTDDVVVVAA 171 Query: 186 KDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRE-RTIAMSLPEFEQSLFM 244 + HP + +++ +++ + + LD V Q G + + + Sbjct: 172 RGHPLCGRPLSIEDLVKWKWVLPAKSVAMRQWLDTVFQAHGLPGPAVQIETNSITMLPRL 231 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 + D L + L L L + P ++ + +P Sbjct: 232 IGETDLLSFTSTRNL---LPDRLGGRLERLGLDA-----TTMRRPLGCVYRREGYLSPAA 283 Query: 305 VWLRETIK 312 + + ++ Sbjct: 284 LRVVTLLQ 291 >UniRef50_UPI0001C3136F transcriptional regulator, MarR family n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C3136F Length = 312 Score = 222 bits (566), Expect = 2e-56, Method: Composition-based stats. Identities = 51/313 (16%), Positives = 103/313 (32%), Gaps = 18/313 (5%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 LD+ + L+ + S++ AA +N TPSA+S+ +A L L P ++ T Sbjct: 2 LDIRRMRVLREVANRGSMSAAADALNYTPSAISQQVATLEREIGVALVERGPRSITLTDA 61 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNALSKQIYQRYPQA 126 ++ ++ + + + + LA ++ + R+P Sbjct: 62 GRALAEHAEIILARLEIAEMEVREIAGLRGGRLRLATFRTAGETIVARAITAFHARHPDV 121 Query: 127 TIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 ++L D L I GEVD+G H ++ SS + +L DV + L Sbjct: 122 ELRLVEGEPEDYLPLIKSGEVDLGLGFEYDHIPRLQVESS-----EERLLMEDVIGLALP 176 Query: 186 KDHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 H +T L I S + + ++ G E + ++ + + Sbjct: 177 LRHRLAERETIELADLAGESWIGSTPRSSVHGFTEAICRDAGFEAEVKFETDDYHVAEAL 236 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 A + +A PR + F ++ +P Sbjct: 237 VAT--GVGIAFLPRLAA--------VTAHPEIVFRHVTPAPPARRVFAVYRAGGLRSPTT 286 Query: 305 VWLRETIKNLYAS 317 + E ++ + Sbjct: 287 SAMVELLEQIGRE 299 >UniRef50_A1U2R6 Transcriptional regulator, LysR family n=3 Tax=Marinobacter RepID=A1U2R6_MARAV Length = 300 Score = 222 bits (566), Expect = 2e-56, Method: Composition-based stats. Identities = 76/315 (24%), Positives = 128/315 (40%), Gaps = 22/315 (6%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 ++ DLNLL + +E S+T+AAK +++T A+S SLA+LR F+DPLF + Sbjct: 1 MALNRPDLNLLHVFDTIYREGSLTRAAKALHLTQPAISHSLARLRDHFNDPLFTRQGNQM 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGLK--FELAAESPLMMIMLNALSKQIY 120 PTPL +++ + +++ H P + + L L L L ++ Sbjct: 61 VPTPLARRFLESMRPGLNQIQSAVNQFHAFDPASQRKTYALGLRDVLESTFLPQLISKL- 119 Query: 121 QRYPQATIKL-RNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 YP ++ R D + G++D +E+L D Sbjct: 120 APYPDMEVQSQRVARRDMETQLAAGKLDFAIDVLLPVSNQT----------SHELLRQDR 169 Query: 180 PCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFE 239 V RK HP + Q ++ ++L HI + D L G +RTI + + Sbjct: 170 LVVLARKGHPVIAQGLDMASYLEARHILVSSRAEGPGIEDFELSRHGAQRTIRLRCQHYY 229 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 + + D LLL Y + Q + ++A P+ + L WHK Sbjct: 230 AACRVVESSD-LLLTMPETYARIIAQNTDIEVLAPPVEMP-------SIDVHLYWHKAYE 281 Query: 300 HNPKIVWLRETIKNL 314 P +VW R+ ++NL Sbjct: 282 QEPALVWFRDLLRNL 296 >UniRef50_C6DBU7 Transcriptional regulator, LysR family n=4 Tax=Pectobacterium RepID=C6DBU7_PECCP Length = 299 Score = 222 bits (566), Expect = 2e-56, Method: Composition-based stats. Identities = 45/315 (14%), Positives = 105/315 (33%), Gaps = 24/315 (7%) Query: 7 TLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTP 66 L + L L + + T+AA++IN++ A S +A L LF + Sbjct: 2 NLSIKQLRAFIALTETDNFTRAAQKINLSQPAFSSLIAGLEEEVGYRLFDRDTRKVQLNA 61 Query: 67 LMVSMEQNLAEWMQMSNLLLDKPHHQT-PRGLKFELAAESPLMMIMLNALSKQIYQRYPQ 125 + +Q + + + K LA + + L + Q ++ YP+ Sbjct: 62 DGLHFIDIARRLVQTHDDAVGEIKSYATGYKGKIVLAVLPSMAVEWLPQVLAQYHRAYPK 121 Query: 126 ATIKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 ++L + +D L A+ G D+ + + P +LF+D + Sbjct: 122 IKVELLDTQWDRCLKAVLDGRADLALTAGQP----------SPGTFSSRMLFADSFYLIC 171 Query: 185 RKDHPALHQ-TWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 + HP + + ++ +YP + C S D +++ G + + + + Sbjct: 172 QNSHPLAQRDSVDVTDVAQYPFVGFCKGTSIRQYTDQLIEPEGF--NYVLEVRQLTTMMG 229 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 + A ++ + Q + ++ + L+ L+ + + Sbjct: 230 LVAAN--YGVSIVTGLTLFQFQHKDIAIIPF-------RDLSLQRGIYLVTDRERQLSVC 280 Query: 304 IVWLRETIKNLYASM 318 + + S Sbjct: 281 AKEFYDFLLERAESF 295 >UniRef50_Q8XFS3 Probable transcription regulator protein n=1 Tax=Ralstonia solanacearum RepID=Q8XFS3_RALSO Length = 306 Score = 221 bits (565), Expect = 2e-56, Method: Composition-based stats. Identities = 41/310 (13%), Positives = 88/310 (28%), Gaps = 25/310 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +DL L +L + +AA R+++ +S + L LF + + T Sbjct: 1 MDLRRLRYFVVLAETLHFGRAALRLSIAQPPLSHQIRVLEEELGARLFDRNNRRVELTAA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQ-TPRGLKFELAAESPLMMI-MLNALSKQIYQRYPQ 125 +++ + + + + S + ++ L + +P Sbjct: 61 GMALLPEARALLAQAEKASTIAARVERGELGELRIGFTSAAALTQVIPRLILAYRRDWPG 120 Query: 126 ATIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 + +R + L A+ +D F LP A LF D V L Sbjct: 121 VRLSIRELTTQEQLTAMLERRLDFAFVRG-------TAAPDLPPAFGAVRLFEDAFVVAL 173 Query: 185 RKDHPAL--HQTWNLDTFLRYPHISICWEQSD--TWALDNVLQELGRERTIAMSLPEFEQ 240 HP + + P + E + ++ + G + Sbjct: 174 PPQHPCADNDGSLFVKALANEPFVMYPPESGTGAYEQVLSLCRHAGFAPQVVQEALSAAT 233 Query: 241 SLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 + + A L +A P Q + F + + + L++ Sbjct: 234 MVGLVAA--GLGVALVPESFQRIEASG--------VAFRALRDSQAKSAMWLVFRAD-EV 282 Query: 301 NPKIVWLRET 310 + + E Sbjct: 283 SVREAAFLEL 292 >UniRef50_B1YXM2 Transcriptional regulator, LysR family n=3 Tax=Burkholderia cepacia complex RepID=B1YXM2_BURA4 Length = 302 Score = 221 bits (565), Expect = 2e-56, Method: Composition-based stats. Identities = 45/308 (14%), Positives = 103/308 (33%), Gaps = 20/308 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++ LL + + S++ A+R++V+ AV++ + +L LF P G++ T Sbjct: 1 MNFTHLLAFYEVARAGSISAGAERLHVSQPAVTREVRELEDRLGIVLFDRMPRGVALTEG 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + + +++ + ++ A L + + R+P+ Sbjct: 61 GKLLYEYASRIFTLADTAEKELAELAGLGSGHMKIGASGTLGVFFVPEAIAAFNARHPRV 120 Query: 127 TIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRK 186 I L + + + G D+ F+ + + + + SD V Sbjct: 121 AIDLTVTNT---ERVEAGLHDLSFTIGFIEGPFDDSI------LHARRIGSDEIAVVAAA 171 Query: 187 DHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAA 246 HP + I ++ + G E MS+ E M Sbjct: 172 GHPLAGTKVRARDLVDRTVIMREPGSGTRAIIEESYRRAGLEIEPLMSVSHTEAIKRMLL 231 Query: 247 QPDNLL-LATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIV 305 L ++T + +L +V + + ++ P ++W K S +P Sbjct: 232 SQHALAYISTL--SVADELRRGELAIVEV-------EDMRIVRPLHMVWAKGRSLSPSSQ 282 Query: 306 WLRETIKN 313 L + + + Sbjct: 283 ALFDLVAS 290 >UniRef50_B2JVL8 Transcriptional regulator, LysR family n=1 Tax=Burkholderia phymatum STM815 RepID=B2JVL8_BURP8 Length = 307 Score = 221 bits (565), Expect = 2e-56, Method: Composition-based stats. Identities = 41/318 (12%), Positives = 91/318 (28%), Gaps = 21/318 (6%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 + L L L + + S ++AA+ +++T VS L +L PLF + Sbjct: 1 MLHLTLRQLRVFEASARHLSFSRAAQELHLTQPGVSSQLKQLETSIGMPLFEQVGRRVFL 60 Query: 65 TPLMVSMEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQIYQRY 123 T + + Q ++L K +++ S + L + + + Sbjct: 61 TAAGKELYSHTRLLQQQLSVLETSLDQLRDMKQGKLKVSLVSGTANPLALQLIAKFTRAF 120 Query: 124 PQATIKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCV 182 P + L + + L+ + E D+ G + + + + Sbjct: 121 PGVRVSLSVGNRECVLNELASNETDLAIMGLPPEG----------QGLAAVRVARNPLVM 170 Query: 183 WLRKDHPALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQS 241 DH + + LD R + A++ E M + E Sbjct: 171 IAPPDHALVRERRIALDMLERETFLVRESGSGTRRAMERFFAEHRVSFRPGMEVSSNEAI 230 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 + L + +L L L L + ++ + + Sbjct: 231 KWAVQAGMGLSVVPL---ATIMAELETLRLKVLDVEHLPIV-----RYLYVVHRESKQLS 282 Query: 302 PKIVWLRETIKNLYASMA 319 R+++ + Sbjct: 283 TAASAFRDSLVSGAHEAG 300 >UniRef50_D1RUJ7 Transcriptional regulatory protein n=1 Tax=Serratia odorifera 4Rx13 RepID=D1RUJ7_SEROD Length = 313 Score = 221 bits (565), Expect = 2e-56, Method: Composition-based stats. Identities = 58/319 (18%), Positives = 123/319 (38%), Gaps = 21/319 (6%) Query: 1 MKKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPL 60 M+ L +N+L L ++ R+++ AA+++N + +S+ LA+LR F DPL V Sbjct: 1 MRTQFAALSINMLQVLHAVLTTRNLSHAAEKLNSSQPQLSRQLAQLREAFGDPLLVRHGR 60 Query: 61 GLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPR--GLKFELAAESPLMMIMLNALSKQ 118 +P + L + + L KP P F A+ + ML L Sbjct: 61 EYVLSPRGQEIILPLEKLINELKELSQKP-EFEPLLCSRCFRFASSDYVAEHMLPQLVDY 119 Query: 119 IYQRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSD 178 + P+ +++ W + + E+D+ ++ P + +L D Sbjct: 120 LQTVAPKVSVEYFTWKPNDYPLLANAELDLA----------TTMIKEAPSGLRGRILGED 169 Query: 179 VPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEF 238 VP + H + + + H+ + +D L+E G R +A+++P F Sbjct: 170 VPVCVMSARHVLAGKALEAKDYASWRHVRVSGGGDKDSFIDRELKEYGIYRQVALTVPFF 229 Query: 239 EQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRN 298 ++ + + + LL+ + + ++ + + ++WH+R Sbjct: 230 SAAMEVVSSSN-LLVTIPKHIAIMMAGKYNVTWCSIDFVKESH-------RYWMIWHERT 281 Query: 299 SHNPKIVWLRETIKNLYAS 317 P+ W R ++ + A Sbjct: 282 HMAPEHKWFRNVVREIVAG 300 >UniRef50_C9LCS7 Putative transcriptional regulator n=1 Tax=Blautia hansenii DSM 20583 RepID=C9LCS7_RUMHA Length = 289 Score = 221 bits (565), Expect = 2e-56, Method: Composition-based stats. Identities = 41/308 (13%), Positives = 97/308 (31%), Gaps = 23/308 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 + L L + + S+T AA+ +N+ AVS ++ +L +++ LF L T Sbjct: 1 MTLRHLKIFSAVCRLESITLAAEEMNMAQPAVSYAIRELEGYYETKLFERMNRRLYITEA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQAT 127 + + + D K + + + L L + Y Q Sbjct: 61 GEQLLIYADSILAQFDEARDVLRDIQTVT-KVRVGTNASYGISYLPQLIAGFKEEYGQIP 119 Query: 128 I-KLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRK 186 I L + + + R ++D G + S+ P + +D Sbjct: 120 IYTLVDNSRQIEEKLIRNDLDFGITDYPSN----------PQFFRSVPVGTDKMIAVCSS 169 Query: 187 DHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAA 246 D+ + ++ + P + ++ +L + ++ I M + A Sbjct: 170 DYSW-QGSAKMEELIEMPLLLRELGSGSRSMVEALLSKYKKKPEIVMESISIRSLIEACA 228 Query: 247 QPDNLLLATAP-RYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIV 305 + + + + Y + H L + + + + ++HK + Sbjct: 229 K--GMGVLLLTKSVLEPYMKSHHLR-------EIKITDESIVREYYFVYHKSKFLTKSMK 279 Query: 306 WLRETIKN 313 +E + Sbjct: 280 CFQEFVLE 287 >UniRef50_A6X5N5 Transcriptional regulator, LysR family n=37 Tax=Brucellaceae RepID=A6X5N5_OCHA4 Length = 301 Score = 221 bits (565), Expect = 2e-56, Method: Composition-based stats. Identities = 36/314 (11%), Positives = 89/314 (28%), Gaps = 26/314 (8%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 + + + L L++ S ++AA+ + +T S +S ++ L L S + Sbjct: 1 MLNISVRQLHYFMALVKAGSFSRAAEVVGITQSTLSAAIQALETELGVTLIDRSGRRMQL 60 Query: 65 TPLMVSMEQNLAEWMQMSNLLLDKPHHQ-TPRGLKFELAAESPLMMIMLNALSKQIYQRY 123 P + + L + P + + + +L + + + Sbjct: 61 LPAGEDFLARARTIIALIEELPEHARQAERPLTTRLRMGVIPSIAPFLLPKVLPATAKAF 120 Query: 124 PQATIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCV 182 P+ + +R LD++ G +D+ + L D+ + Sbjct: 121 PELQLTIREGLTRSLLDSLRSGSLDVALVAHPYDL----------DEFEIAELGRDIFYL 170 Query: 183 WLRKDHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIA---MSLPEF 238 +R+DH + D P + + + +G A + Sbjct: 171 AVRRDHALANRDQIDADDLQGQPFLLLETGHCLREHVM---AAIGSTPAQASGDVHATSI 227 Query: 239 EQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRN 298 + + + + P L +P K L+W Sbjct: 228 MTLVQLV--DFGMGVTLLPEVAVKAGATRGTELSIVPYE-----GKNNYRSLVLVWRSNA 280 Query: 299 SHNPKIVWLRETIK 312 + + + ++ Sbjct: 281 ARRNEFQLFADHLR 294 >UniRef50_A9HZJ0 Transcriptional regulator, LysR-family n=2 Tax=Burkholderiales RepID=A9HZJ0_BORPD Length = 297 Score = 221 bits (565), Expect = 2e-56, Method: Composition-based stats. Identities = 42/312 (13%), Positives = 83/312 (26%), Gaps = 25/312 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +D L + +E S + AA+R++V+ +S + L L + + T Sbjct: 1 MDFRQLRYFVAVAEELSFSGAARRLHVSQPPLSLQIKALEEELGSVLLNRNNRKVELTEA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPH-HQTPRGLKFELAAESPL-MMIMLNALSKQIYQRYPQ 125 + + D + ++ + + M + + R+P Sbjct: 61 GTLFLEQARRALAYLERAGDVVRQAARGEAGELRVSFTASVPMFEAFPQIVQAFRARHPG 120 Query: 126 ATIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 A L + L A+ VDIGF L P I L++D L Sbjct: 121 ARADLIHLSTGQQLRALADKSVDIGFLRPSP-------LFEPPANIAVAQLWTDRLVAVL 173 Query: 185 RKDHPALHQ--TWNLDTFLRYPHISICW--EQSDTWALDNVLQELGRERTIAMSLPEFEQ 240 H + + I + + G + E Sbjct: 174 PAGHALARRPGPLPMAALADESFILFPRGLGCGLFEHVTVLASRAGFAPHVRQEAREGAT 233 Query: 241 SLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 + + A + ++ P + + + L + Sbjct: 234 IIGLVAA--GMGISVLPDTYMKTGIPG--------VTYCALDTRDAASRVLLAYRAD-DA 282 Query: 301 NPKIVWLRETIK 312 P + RET Sbjct: 283 APLLRRFRETAL 294 >UniRef50_B1KU62 Transcriptional regulator, LysR family n=10 Tax=Clostridium RepID=B1KU62_CLOBM Length = 293 Score = 221 bits (565), Expect = 2e-56, Method: Composition-based stats. Identities = 36/308 (11%), Positives = 95/308 (30%), Gaps = 21/308 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++ L + ++ ++T+ A+++ ++ AVS+++ +L + LF L T Sbjct: 1 MNERKLRIFYEVAEKLNMTEVAEKLYISQPAVSQTILELESELGVKLFDRINRRLYLTNE 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + M + + K ++ A + + + +L + + ++Y Sbjct: 61 GELFLNYVRRILNMYDDAIRSLKDINSLKTGKLKIGASTTIGIYILPDIIGKFTKQYKGI 120 Query: 127 TIKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + + + D I +D F I E D Sbjct: 121 DTSIAIENTKLISDMILDNSIDFAFVEGPV----------YNEEIIKENFCDDELVFITS 170 Query: 186 KDHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 +HP ++ + I ++ + IA L E Sbjct: 171 PEHPWSNKDEISITEVDKEKIIMREIGSGTREVFESYMTANNVNYNIAFELGNTEAIKKA 230 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 L ++ + C + L + + ++ +++ L++HK + + Sbjct: 231 VEA--GLGVSCISKRCIKNEINNNT------LSWTKLKEFEIKRKLILIYHKDKFLSTLL 282 Query: 305 VWLRETIK 312 + Sbjct: 283 KTFIKFAL 290 >UniRef50_A4W926 Transcriptional regulator, LysR family n=1 Tax=Enterobacter sp. 638 RepID=A4W926_ENT38 Length = 303 Score = 221 bits (565), Expect = 3e-56, Method: Composition-based stats. Identities = 43/297 (14%), Positives = 100/297 (33%), Gaps = 20/297 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++ LL + +E +AA+R+++ +S+++ +L LF + +S TP Sbjct: 2 IETRLLTQFIAVAEELHFNRAAQRLHMAQPPLSQAIRRLEQEIGVSLFERTNRSVSLTPA 61 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQ-TPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 V+ + + +++ + ++K L S L K YP Sbjct: 62 GVTFLDSARDVLRLLDEGVEKIRRVSQGIEGHLTLTFISLAGYAPLLRALKNFRAAYPAV 121 Query: 127 TIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + + + +DA+ +G D+GF + ++ + + + L Sbjct: 122 SFTMEEATTQEQIDALEQGRADLGFMRPP---------GRTSPGLRFDAILREPVVIALP 172 Query: 186 KDHPALH-QTWNLDTFLRYPHISICW--EQSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 H + T L +S Q L + + G I+ + + + Sbjct: 173 AAHRLVDSGTVKLAALQNDHFVSPPRHLGQGFHDQLIQLCEAAGFRPHISQQARQLQTLV 232 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 + A +A P + + + L + + V + W+ R++ Sbjct: 233 TLVAS--GFGVALLPASLAHEMR-EDVVFRPLEVDAP---DELKHVELLMGWNARST 283 >UniRef50_B5JLL8 Putative uncharacterized protein n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JLL8_9BACT Length = 297 Score = 221 bits (565), Expect = 3e-56, Method: Composition-based stats. Identities = 46/308 (14%), Positives = 100/308 (32%), Gaps = 20/308 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++ N L C + +E+S T+AAK N++ ++S +AKL + LF+ P G+ + Sbjct: 1 MEFNQLKCFLAVAREQSFTRAAKACNLSQPSLSYQIAKLEEELGESLFIRKPKGVELSEP 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPH-HQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + ++ + + + +L L K + YPQ Sbjct: 61 GKLLLDGAHRIREEQEKIVSTFRTREKLMAGEVRFGIIPTIAPYLLPPLMKAFRREYPQI 120 Query: 127 TIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + +R + + GE++ + P ++ + LF + + + Sbjct: 121 RLIVRESRTSQLVKEVVDGELEFAVVSDIAQPLLKKYS------LHLNKLFEEELLLAVP 174 Query: 186 KDHPA-LHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 HPA + + I + + Q G + + ++ + L M Sbjct: 175 NAHPACALPELRVQSIDESELILLSEGNCLRDQTMQLCQR-GDKLS-SLVCEQLPTQLAM 232 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 L +A P +L + + + LL + + Sbjct: 233 V--SGGLGVAIVPEMAVKNASSAELTFLHF-------KSPGTKRLIGLLKKRGGKLSLAA 283 Query: 305 VWLRETIK 312 + IK Sbjct: 284 NEFLKRIK 291 >UniRef50_D0KYG7 Transcriptional regulator, LysR family n=3 Tax=Gammaproteobacteria RepID=D0KYG7_HALNC Length = 312 Score = 221 bits (564), Expect = 3e-56, Method: Composition-based stats. Identities = 52/311 (16%), Positives = 103/311 (33%), Gaps = 24/311 (7%) Query: 11 NLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVS 70 L + + S TKAA+ ++ T AV+ + +L FD LF + ++ T + Sbjct: 4 RRLKVFNTVARLLSFTKAAEALHTTQPAVTFQVRQLEEHFDTRLFDRTHNRVTLTDVGHV 63 Query: 71 MEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNALSKQIYQRYPQATIK 129 + + ++ + + + T + A + + ML AL + ++ ++ Sbjct: 64 VYEISERMFELYDEMDRRVKEMTGEVGGSLNIGASTTIAENMLPALLGKFRLKHRDLAVR 123 Query: 130 LRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDH 188 L+ + + + + VD+ + E D V L DH Sbjct: 124 LKVGNTEAIVSMVEHNVVDLAIVEGTVGN----------KNLLVETCRRDELVVILPPDH 173 Query: 189 PALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRE--RTIAMSLPEFEQSLFMA 245 ++ +LD + Y I + N L E G + M L E Sbjct: 174 QLAGLESVSLDQLMSYDFICREEGSGTREMVLNYLIEHGYSDGWDVCMELGSPEAIKGAV 233 Query: 246 AQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIV 305 + L+ L L A+PL +L F+ + + P + Sbjct: 234 QA--GMGLSIMSASGITKELKLGL-LKAVPLS------PRLFRDFSFVRQRHKFRLPAME 284 Query: 306 WLRETIKNLYA 316 L E ++ + Sbjct: 285 DLLEFSRDYCS 295 >UniRef50_P20667 HTH-type transcriptional regulator catR n=15 Tax=Bacteria RepID=CATR_PSEPU Length = 289 Score = 221 bits (564), Expect = 3e-56, Method: Composition-based stats. Identities = 44/312 (14%), Positives = 94/312 (30%), Gaps = 28/312 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L ++L + + T+AA+ +++ +S+ +++L L V L T Sbjct: 1 MELRHLRYFKVLAETLNFTRAAELLHIAQPPLSRQISQLEDQLGTLLVVRE-RPLRLTEA 59 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRGLK-FELAAESPLMMIMLNALSKQIYQRYPQA 126 + + + D + + + +L L +++ Q + Sbjct: 60 GRFFYEQSCTVL-QLQNISDNTRRIGQGQRQWLGIGFAPSTLYKVLPELIRELRQDS-EL 117 Query: 127 TIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + L ++A+ G +DI F + I +VL D L Sbjct: 118 ELGLNEMTTLQQVEALKSGRIDIAFGRIRIDDPA----------IHQQVLCEDPLVAVLP 167 Query: 186 KDHPALHQTWNLDTFLRYPHISIC--WEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 KDHP L I S + + G ++ E + ++ Sbjct: 168 KDHPLASSPLTLAQLAGEAFILYPANPRPSYADHVLALFAHHGMSIHVSQWANELQTAIG 227 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 + A + + P Q ++ + + P L K +P Sbjct: 228 LVA--VGVGVTLVPASVQQQHRT--------DIEYVSLLDSGAVSPIILSRRKG-DVSPI 276 Query: 304 IVWLRETIKNLY 315 + I Sbjct: 277 VQRCLTLIAQQA 288 >UniRef50_Q39JP1 Transcriptional regulator, LysR family n=11 Tax=Proteobacteria RepID=Q39JP1_BURS3 Length = 300 Score = 221 bits (564), Expect = 3e-56, Method: Composition-based stats. Identities = 52/315 (16%), Positives = 98/315 (31%), Gaps = 27/315 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L L +E +AA+R+ + A+S + L LF + + Sbjct: 1 MELKQLRAFVTLAEELHFGRAAQRLFIVQPALSMQIKALEEELGARLFERDRHKVELSDT 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPH-HQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 +Q + +A S ++ ++L A+ + + +RYP Sbjct: 61 GRVFLPEARATLQQAARAEQMARLSSRGEIGTLRIAFVSSVLPVLLPAVLRTMRERYPLI 120 Query: 127 TIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 T++L++ D + A+ +D G + ID V+ + V L Sbjct: 121 TLELKDLPTPDQIAALRDRRIDFGMIRLP----------AAYAGIDTRVVLEEGFVVALP 170 Query: 186 KDHPA-LHQTWNLDTFLRYP-HISICW-EQSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 DHP H + P + + L G IA EF L Sbjct: 171 LDHPLAAHDAISPAALRGQPAFVLARRYAPGFHDDMLLALSRAGTTLEIAQEFGEFTTML 230 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 + A + L ++A PL + L W + +P Sbjct: 231 ALVAAGMGIGLIP-----AEAASALPPNVLARPLDLAGHRTG-----IGLAW--TDLDSP 278 Query: 303 KIVWLRETIKNLYAS 317 ++ + A+ Sbjct: 279 LKRAFVAALEQVTAA 293 >UniRef50_Q3AEF0 Transcriptional regulator, LysR family n=1 Tax=Carboxydothermus hydrogenoformans Z-2901 RepID=Q3AEF0_CARHZ Length = 301 Score = 221 bits (564), Expect = 3e-56, Method: Composition-based stats. Identities = 47/310 (15%), Positives = 98/310 (31%), Gaps = 24/310 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++LN L ++++ S++KAAK ++++ A+S +A L L + G+ T Sbjct: 1 MNLNQLEAFCNIVEQGSISKAAKLMHLSQPALSTQIAALENQLQVKLMERTNRGIELTEA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 ++ + L ++ + + A S + L ++Y A Sbjct: 61 GETLLYYAKRICNLVKNLNEEIERLKNLEEEELSIGAASTIGGYALPCSIYIFQEKYESA 120 Query: 127 TIKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 IKL + + ++A+ ++DIG L D + + Sbjct: 121 RIKLTIMNTEKVIEALLDRQIDIGLVESNIES----------NEFISSHLTYDELVLVVP 170 Query: 186 KDHPALHQTW-NLDTFLRYPHISICWEQSDTWALDNVLQELGR---ERTIAMSLPEFEQS 241 ++ ++ LD P I ++ L E G + I M + + Sbjct: 171 NNNSYKNKEILTLDELRTLPFIIREKGSGIRQTIEKALAEKGLNISDLNIVMEVNSIDAI 230 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 ++ PR+ L + + L PF + K + Sbjct: 231 KVAVESGKG--VSLLPRFAVKKELRTG------SLKSIKVKDISLLHPFVAITLKNKKRS 282 Query: 302 PKIVWLRETI 311 I Sbjct: 283 LLEKKFLAFI 292 >UniRef50_Q13JD9 Transcriptional regulator, LysR family n=1 Tax=Burkholderia xenovorans LB400 RepID=Q13JD9_BURXL Length = 305 Score = 221 bits (564), Expect = 3e-56, Method: Composition-based stats. Identities = 63/316 (19%), Positives = 119/316 (37%), Gaps = 22/316 (6%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 + DLNL+ + + SV+ AA+R+N+T VS +L++LR DPLF + G+ Sbjct: 6 MQTASTDLNLIRAFVAIYETGSVSAAARRLNLTQPTVSYALSRLRTLLHDPLFSRTREGM 65 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPH--HQTPRGLKFELAAESPLMMIMLNALSKQIY 120 +PT + + + + + F +A + L + +++ Sbjct: 66 APTFNASQLYETFRQALDRIEGAIAATRYFDAATSTRCFRIALSDLGELYFLPRMVERLQ 125 Query: 121 QRYPQATIKLRNWD-YDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 + P +++ D + + + G++D LFS+ Sbjct: 126 RTAPGVELEVVQLDVERTAEWLNTGQIDAAVGNLHLVGGKA----------RRRYLFSET 175 Query: 180 PCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFE 239 + HP + T +L ++R H+ + S +++V+ +G R IA+ +P F Sbjct: 176 YSCLVSHRHPWIGTTLSLGDYVRAKHV-VGASSSGHRLVEDVMTGMGLSRKIALRVPHFT 234 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 + + A D + L R Y + + LP+P D L W R + Sbjct: 235 NVVDVVAGSDLV-LTLPARVANVYQSTGTVRALPLPVPVD-------PFDVNLYWQDRAT 286 Query: 300 HNPKIVWLRETIKNLY 315 WL E I Sbjct: 287 DLSAQKWLCEIIAETL 302 >UniRef50_A1BA89 Transcriptional regulator, LysR family n=4 Tax=Alphaproteobacteria RepID=A1BA89_PARDP Length = 324 Score = 221 bits (564), Expect = 3e-56, Method: Composition-based stats. Identities = 50/314 (15%), Positives = 97/314 (30%), Gaps = 26/314 (8%) Query: 6 TTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPT 65 + + L L + + + VT+AA+ +N+T SAVS +++ L A F + T Sbjct: 23 SGMTLEQLRIFLAVAERQHVTRAAEALNLTQSAVSAAVSALEARHGVRFFDRVGRRIVLT 82 Query: 66 PLMVSMEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQIYQRYP 124 + + + + + A + L + + +P Sbjct: 83 ETGEAFMAEARAVLDRVETAEMVLEDLSREPRGRLRVHASQTVASYWLPPRLVALREMHP 142 Query: 125 QATIKL-RNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVW 183 ++L + + DA+ G D+G + +V+ D + Sbjct: 143 GIELRLTVSNTTHAADAVQDGGADLGLVEGAV----------AHGGLHRQVVARDRLVLV 192 Query: 184 LRKDHPALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRE---RTIAMSLPEFE 239 + DHP + I + L G +++ LP E Sbjct: 193 MATDHPWAGVEAMPQAGLEAQNWILREPGSGTRSEFETWLAGRGLSIAALPLSLELPSNE 252 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 L A L A + R + + LP E PF+LL + R Sbjct: 253 AVLNAVAASQCLA-ALSQRAVARPAAAGWIRTLPLP---------GAERPFSLLTNPRRY 302 Query: 300 HNPKIVWLRETIKN 313 + L + + + Sbjct: 303 RTRAVQALIDILTD 316 >UniRef50_UPI0001C30F27 transcriptional regulator, LysR family n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C30F27 Length = 300 Score = 221 bits (564), Expect = 3e-56, Method: Composition-based stats. Identities = 47/315 (14%), Positives = 92/315 (29%), Gaps = 21/315 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 + + L + + VT AA ++V+ A+S++LA+++A PLF L Sbjct: 1 MTVEELRWFVAVAESEHVTAAAAELHVSQPALSRALARVQAHVGVPLFDRRGRRLRLNRY 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQIYQRYPQ 125 + + + T LA L ++ AL + PQ Sbjct: 61 GRLYLDHARRSLADLDAGTQALADATGTAGGGTVVLAFLHTLGSWLVPALLRGFGAAEPQ 120 Query: 126 ATIKLRNWD-YDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 ++L + L + GEVD+ + I+++ L + + Sbjct: 121 IALELAQGSASEMLAQLRAGEVDLILTSPRPD----------DPEIEWKPLGREPLRAVV 170 Query: 185 RKDHPA-LHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 H + L +++ E D + G IA + Sbjct: 171 APGHALAARKRIRLADLAEERFVAMKPEYGLRGLTDQLCAAAGFNPRIAFEGDDIGTLRG 230 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 + A + L P + P + L W + +P Sbjct: 231 LVAAGLGVALLPPPHSA-------GAEIEQPATPHLHLADRGAARTLGLAWDRTRYRSPA 283 Query: 304 IVWLRETIKNLYASM 318 R + A++ Sbjct: 284 TETFRAFVAAHGAAL 298 >UniRef50_A5W7U4 Transcriptional regulator, LysR family n=17 Tax=Proteobacteria RepID=A5W7U4_PSEP1 Length = 308 Score = 221 bits (564), Expect = 3e-56, Method: Composition-based stats. Identities = 44/314 (14%), Positives = 96/314 (30%), Gaps = 21/314 (6%) Query: 7 TLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTP 66 L + + Q +SV++AA + ++ SA S S+ +L LF + L+ Sbjct: 2 RFTLRQMQVFVAVAQHQSVSRAASLLALSQSAASTSITELERQSSCQLFDRAGKRLALNA 61 Query: 67 LMVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 L + + + + D + ++ + A + + L Q +P++ Sbjct: 62 LGHQLLPQAVALLDQAKEIEDLLNGKSGF-GSLAVGATLTIGNYLATLLIGNYMQTHPES 120 Query: 127 TIKLR-NWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 +KL + + E+D+G + + ++ + D V+ Sbjct: 121 QVKLHVQNTAHIVQQVAHYEIDLGLIEGDCN----------HPDLEVQPWVEDELVVFCA 170 Query: 186 KDHPALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 HP ++++ + I D ++ I + L E Sbjct: 171 PQHPLAKLGRADIESLSQEAWILREQGSGTRLTFDQAMRHHRANLNIRLELEHTEAIKRA 230 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 + R + P+ E L F +WHK+ + Sbjct: 231 VESGLGIGC--ISRLALRDAFRRGSLV---PVETPEL---DLLRQFYFIWHKQKYQTSAM 282 Query: 305 VWLRETIKNLYASM 318 E ++ A Sbjct: 283 REFLELCRSFTAGF 296 >UniRef50_C6D237 Transcriptional regulator, LysR family n=2 Tax=Bacillales RepID=C6D237_PAESJ Length = 296 Score = 221 bits (564), Expect = 3e-56, Method: Composition-based stats. Identities = 45/312 (14%), Positives = 101/312 (32%), Gaps = 31/312 (9%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L + + + +TKAA+ + + A+SK++++L PLF + + Sbjct: 1 MELLQLHYFRTVAKYEHMTKAAEVLRIAQPALSKTISRLEEDVGVPLFDRNNRQIRLNRF 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHH-QTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + Q + + + + LA + + L++ + + P+ Sbjct: 61 GRAFLQQVEIALGALDEGRRELADMMGTEQGTIRLATPT---LNRLSSTISEFRKENPEI 117 Query: 127 TIKLRN----WDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCV 182 ++ D + + RG+VD+ F + I +++ C+ Sbjct: 118 IFRVTQIPPASSSDMIGLLERGDVDLCFIAAPLNQS----------WIKEQIILKAEVCL 167 Query: 183 WLRKDHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQS 241 + HP T L +I + + G R I + E Sbjct: 168 AVPITHPLASKDTITLIETANEAYIEYHAGHPFRQINEAYCEAAGISRNIICEVDEPSAL 227 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 + L +A PR + + Q E F++ W+++ + Sbjct: 228 WSLVQA--GLGVAFVPRNTNEHPH----------VKLLNIQSPVCEREFSIAWNEKRYLS 275 Query: 302 PKIVWLRETIKN 313 E +K+ Sbjct: 276 RASRQYLEFLKS 287 >UniRef50_B4DCH5 Transcriptional regulator, LysR family n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4DCH5_9BACT Length = 298 Score = 221 bits (564), Expect = 3e-56, Method: Composition-based stats. Identities = 42/308 (13%), Positives = 101/308 (32%), Gaps = 25/308 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L + ++R+ T+AA R+++ +A+S+ + KL PLF + T Sbjct: 1 MELYQLQYFLEVARQRNFTRAAARLHLAQAALSEQIRKLEDELATPLFQRGRRESTLTAA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNALSKQIYQRYPQA 126 ++ + ++ + K + A + +L A +R+PQ Sbjct: 61 GETLRGHAEALLERAAAARHAVQELVGLRSGKLVIGAIPSVSAGLLPAAVTAFRKRHPQV 120 Query: 127 TIKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + + +++ + + G V++G + D L ++ + Sbjct: 121 ELVIAEGTSEAVAEGVESGRVEMGVIQHPTPAGP----------FDERTLLTEPFVILAG 170 Query: 186 KDHPALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 H + +L + P + + + G E +A E E + Sbjct: 171 PHHAIARHRRVSLASLAGEPFVFFK--GRARESALAACRAAGFEPRLACESGELETVRAL 228 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 A L +A P + + K+E ++ + ++ +P Sbjct: 229 VAA--GLGVAILPELAAQRARPA--------CALVRLSEPKVERKLVIVTRRGHAPSPAA 278 Query: 305 VWLRETIK 312 ++ Sbjct: 279 AEFETLLR 286 >UniRef50_B2HU56 Transcriptional regulator n=17 Tax=Acinetobacter RepID=B2HU56_ACIBC Length = 295 Score = 221 bits (564), Expect = 3e-56, Method: Composition-based stats. Identities = 55/312 (17%), Positives = 100/312 (32%), Gaps = 26/312 (8%) Query: 7 TLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTP 66 + L L + QE +VTKA+ + +T SA S +LA L PLF L Sbjct: 2 RMTLRQLAVFVAVAQEGTVTKASDAVRLTQSAASMALADLEDGLGAPLFDRLGKRLQLND 61 Query: 67 LMVSMEQNLAEWMQMSNLLLDKPH-HQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQ 125 L + E + + A + ++ L QR+PQ Sbjct: 62 LGRFLLPQALEILGRCEAFEQAAKGELQSID--LRIGATLTISDYLMPDLMANFLQRHPQ 119 Query: 126 ATIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 A ++L+ ++A+ + ++D+ H + D V Sbjct: 120 AHLQLQVGNTRQMIEAVNQFQLDLALIEGSCHLPQ----------LQCIHWRDDELAVCC 169 Query: 185 RKDHPALH--QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 DHP + F I DN + + + I ++L E L Sbjct: 170 SPDHPLTRLNRPLTPQDFHDVEWILREEGSGTREVFDNAILQDLPDANIRLTLGHNEAIL 229 Query: 243 FMAAQPDNLLLATAPRYCQY-YNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 + A L ++ + ++ QL ++ P +L P +L H++ Sbjct: 230 KIVAG--GLGMSCISKLAIEPLSEKGQLVILDTPF-------WQLTRPLYMLVHRQKYQG 280 Query: 302 PKIVWLRETIKN 313 P + + Sbjct: 281 PGLKAFLKFCDE 292 >UniRef50_Q391Q9 Transcriptional regulator, LysR family n=1 Tax=Burkholderia sp. 383 RepID=Q391Q9_BURS3 Length = 322 Score = 221 bits (564), Expect = 3e-56, Method: Composition-based stats. Identities = 71/321 (22%), Positives = 124/321 (38%), Gaps = 17/321 (5%) Query: 1 MKKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPL 60 MK LDLNLL LM E +VT+AA+R+ ++ SAVS +L +LR D LF + Sbjct: 1 MKDVFRQLDLNLLRVFAALMAEGNVTRAAERLALSQSAVSNALRRLRESLGDVLFEKTVS 60 Query: 61 GLSPTPLMVSMEQNLAEWMQMSNLLLD-KPHHQTPRGLKFELAAESPLMMIMLNALSKQI 119 G+ PT + + + F +A + ++ L+ + Sbjct: 61 GVRPTARARELWSAVQPHFDALKQAISPDQFDPQEHRGTFTIAMSDYSVERIMPRLAHFM 120 Query: 120 YQRYPQATIKLRNWD-YDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSD 178 + P I+L + D RG VD+ G + + ++ Sbjct: 121 GEHAPSMRIELTPFSVADLPAMFDRGGVDLAIGGYLNDSSPSS-------GVRTHEMWPI 173 Query: 179 VPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEF 238 +RKDHP L FL H+ + + D++L G +R + ++L + Sbjct: 174 HWSCLMRKDHPLAKGPLTLKRFLAARHLDVGFSGMRVPVYDSLLSAHGLQRNLVLTLNAY 233 Query: 239 EQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRN 298 +L + + D + + +L P+ P+ ++WH+R Sbjct: 234 SPALAIIRESDFIGV-LPTTLLDLSIHEKELVSRQPPVRMPA-------RPYCVIWHQRW 285 Query: 299 SHNPKIVWLRETIKNLYASMA 319 +P WLR+TI +L+ A Sbjct: 286 DSHPAHRWLRQTIVSLFTRPA 306 >UniRef50_C6VMR5 Transcription regulator n=5 Tax=Lactobacillus RepID=C6VMR5_LACPJ Length = 309 Score = 221 bits (564), Expect = 3e-56, Method: Composition-based stats. Identities = 45/313 (14%), Positives = 102/313 (32%), Gaps = 20/313 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L+ + L + + + KAA+ + ++ ++S ++ KL PLF + T + Sbjct: 1 MNLRHLVFFKELARTQHMAKAAENLGISQPSLSYAIKKLEHELGVPLFEADGRNIKLTSI 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQ-TPRGLKFELAAESPLMMIMLNALSKQIYQRYPQ- 125 + + + + + P +L L ++ L + Sbjct: 61 GGVYLKYVTATLNDLSQGNELVKQLMDPDTGHVKLGFTYTLGQQLVPELLSHFKNQSENQ 120 Query: 126 -ATIKL-RNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVW 183 T +L + L A+ + DI + + D+ L Sbjct: 121 AITFELGQGNSGVLLQALADEKYDIVLASNVDRLGEQLTAHL----FDFIPLVQQEIVAV 176 Query: 184 LRKDHPALHQ-TWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 + DHPA+ + +++ YP I +D +L + +A + E Sbjct: 177 VPNDHPAVQKNPLHVEDLAPYPMILFSQNSGLRPLIDQILSAAHVQPKVAYEVEEDHTMA 236 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 N+ +A P ++ + L + L+ L+ + P Sbjct: 237 GFVR--YNMGVALMPYL--PLLNPERVQIKHL-------ADQPLQHQIYLVVRRSGFITP 285 Query: 303 KIVWLRETIKNLY 315 + +E I++ Sbjct: 286 AVHRFQEFIRSYC 298 >UniRef50_B8G0Z2 Transcriptional regulator, LysR family n=4 Tax=Firmicutes RepID=B8G0Z2_DESHD Length = 303 Score = 221 bits (564), Expect = 4e-56, Method: Composition-based stats. Identities = 36/300 (12%), Positives = 76/300 (25%), Gaps = 21/300 (7%) Query: 13 LLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSME 72 L + + +E+S +KAA+ + ++ AVS + L F L S + TP + Sbjct: 6 LEIFRKVAEEKSFSKAAEDLFLSQPAVSSHIRNLENEFGTKLIYRSSKHVDLTPAGEILY 65 Query: 73 QNLAEWMQMSNLLLDKPHHQTP-RGLKFELAAESPLMMIMLNALSKQIYQRYPQATIKLR 131 + + +K + + A + +L L Q +RYP I + Sbjct: 66 EQACRIINQYQEAKEKINQIQSIVSGNLRIGASFTIGEYILPELVSQTARRYPNLNINVT 125 Query: 132 NW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPA 190 + + + +D+ + E D + HP Sbjct: 126 IGNTEEIAQGLRQNRLDVALVEGKITG----------KEFILEPFMVDEMVLIALPSHPL 175 Query: 191 LH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQPD 249 + I D ++ L + Sbjct: 176 AKIKGVTAQDLEDQVWILRETGSGTREFSDRFIETLKIPVKHSYGFSSNTGVKAAVLS-- 233 Query: 250 NLLLATAPRYCQYYNQLHQ-LPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWLR 308 L +A + + ++ L F + ++ Sbjct: 234 GLGIALVSKLIIQKEIKAGEIAIIPLEENLPRL-----SREFLIARGQQTYFTKASEAFL 288 >UniRef50_A4YPA1 Putative transcriptional regulator, LysR family n=1 Tax=Bradyrhizobium sp. ORS278 RepID=A4YPA1_BRASO Length = 310 Score = 220 bits (563), Expect = 4e-56, Method: Composition-based stats. Identities = 71/318 (22%), Positives = 126/318 (39%), Gaps = 21/318 (6%) Query: 4 SITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLS 63 + +DLNLL+ + LMQ RSV++ A+R+ + + S +L +LRA DPLFV +P G+ Sbjct: 8 DLRDVDLNLLVAFEALMQTRSVSRMAQRLRIGQPSASHALKRLRALLGDPLFVRTPAGMI 67 Query: 64 PTPLMVSMEQNLAEWMQMSNLLL--DKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQ 121 PTP +++ + + + L F + A + ++ + L + Sbjct: 68 PTPHALALAEPIRAILTSIERTLFARASFDPRAERRVFRIGAMDYVQAVIADPLLAVLQA 127 Query: 122 RYPQATIKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 + P + L D D+ ++ RGE+D+ E+L+ + Sbjct: 128 QAPGCKLILTTTDCDTAGRSLARGEIDLAIGAFPQIKAGS----------HQELLYRERY 177 Query: 181 CVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQ 240 L + +L PH+ + + LD+VL+ G +R +A+S P F Sbjct: 178 ECVFDAKACRLGKRVTRAQWLALPHVIMSVHGDYSGPLDDVLKSSGEQREVAVSTPNFLA 237 Query: 241 SLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 F+ + A R + + L LP T++WH R Sbjct: 238 IPFLLRNKRLIA-ALPSRMARAFCGRLGLSTCPLPFTAP-------TFDVTMIWHARTGD 289 Query: 301 NPKIVWLRETIKNLYASM 318 P WLR+ I + + Sbjct: 290 EPGAAWLRDQITAICRRI 307 >UniRef50_A9AQZ4 Transcriptional regulator, LysR family n=24 Tax=Burkholderiaceae RepID=A9AQZ4_BURM1 Length = 327 Score = 220 bits (563), Expect = 4e-56, Method: Composition-based stats. Identities = 67/315 (21%), Positives = 123/315 (39%), Gaps = 20/315 (6%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 + LDLNL+ L L R+V++A + + V+ VS +L +LRA+F DPLFV + G+ P Sbjct: 20 MDALDLNLIPYLVALDDTRNVSRAGELLGVSQPRVSTALGRLRAYFGDPLFVRTSRGMEP 79 Query: 65 TPLMVSMEQNLAEWMQMSNLLLDKPHHQTPR--GLKFELAAESPLMMIMLNALSKQIYQR 122 TP +++ + + L PH P F +A ++ L L + Q Sbjct: 80 TPRALALLPAARDALAQIERGLVAPHDFDPAASTHTFSIALSDVGEIVFLPKLLQAFAQC 139 Query: 123 YPQATIKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPC 181 P A ++ + +D + + G +D+ + LF+ Sbjct: 140 APHANLRSVSLPHDEVGRGLEAGSIDLAVGYFPDLDG---------NNFFQQRLFTHRFV 190 Query: 182 VWLRKDHPALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQ 240 +R+ HP + + ++ FL H + E L+ L + +R + P F Sbjct: 191 CLMRRGHPLEQARPFTVEQFLESGHAVVRAEGRSQEVLEKYLAKQRMQRRAVLETPHFMS 250 Query: 241 SLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 F+ ++ D + Y H + E WH++ + Sbjct: 251 LPFILSRTDLIA-TVPHAIGYAYAAEHAF------IVPVEPPLPLPRFDLKQHWHRKFHN 303 Query: 301 NPKIVWLRETIKNLY 315 +P+ WLR + +L+ Sbjct: 304 DPRTAWLRGVVASLF 318 >UniRef50_Q167Q4 Oxidative stress transcription regulator, oxyR, putative n=28 Tax=Alphaproteobacteria RepID=Q167Q4_ROSDO Length = 313 Score = 220 bits (563), Expect = 4e-56, Method: Composition-based stats. Identities = 32/300 (10%), Positives = 78/300 (26%), Gaps = 23/300 (7%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 + L L L L + + +AA +T A+S + +L A PL + + Sbjct: 1 MIGLTLKQLRYFDALARHKHFGRAADSCAITQPALSLQIKELEALVGAPLVERATREIRL 60 Query: 65 TPLMVSMEQNLAEWMQMSNLLLDKPHHQTP-RGLKFELAAESPLMMIMLNALSKQIYQRY 123 T L + + + L + + L +L ++ QR+ Sbjct: 61 TSLGSDFITRTRKILLSIDELDELARAAQGPLAGRLRLGVIPTAAPYLLPSIMTSFAQRF 120 Query: 124 PQATIKLRN-WDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCV 182 ++LR + + +D+ + + LF + + Sbjct: 121 ADLDVELRESVTQALIQDLLEARLDLAIVALPISEPA----------LREFALFEEDFVL 170 Query: 183 WLRKDHPALHQTW-NLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQS 241 + + + + + + + + M Sbjct: 171 VRPPQD--AGKPVPSPEMLQEMRLLLLEEGHCFRDQALSFCKSVEAHPRQMMEGSSLSTL 228 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 + M + + P L + + + ++W K N + Sbjct: 229 VQMV--GAGIGVTLIPEMALS------LETRSADVAVARFPKPGPSRTIGMVWRKTNPLS 280 >UniRef50_O33945 Probable cat1 operon transcriptional activator n=9 Tax=Proteobacteria RepID=CATR_ACILW Length = 303 Score = 220 bits (563), Expect = 4e-56, Method: Composition-based stats. Identities = 45/316 (14%), Positives = 102/316 (32%), Gaps = 28/316 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +DL + +ER+ T+AA+++N+ +S+ + L PL + + + T Sbjct: 1 MDLRQFRYFVAVARERNFTRAARQLNIAQPPLSRQIQLLEEEVGVPLLIRNSRPVQLTDA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRGLK-FELAAESPLMMIMLNALSKQIYQRYPQA 126 + + + + + + + +L L +++ Q P+ Sbjct: 61 GRLFFEQAIQVLGRVEQMQAATRRVGLHQRSVLSIGFVASTLYGVLPTLMRKLRQHAPEL 120 Query: 127 TIKLRN-WDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 I++ + AI G +DIGF + + VL + V L Sbjct: 121 DIQMVELMSVQQIQAINEGRIDIGFGR----------VHHSDPNVSSIVLHEERLAVALP 170 Query: 186 KDHPALHQ--TWNLDTFLRYPHISIC--WEQSDTWALDNVLQELGRERTIAMSLPEFEQS 241 + P + + I + N+L + M + E + + Sbjct: 171 MESPMARESTPLPVHQLAGEKLIVYPKEPRPGFADQVLNILDRHDVQPGQVMEVREIQTA 230 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 L + A + P + + + + P ++ H+ N + Sbjct: 231 LGLVAAEFG--VCVIPASARQMRH---------DVHYRLIDGDRATSPV-IVSHRANDSS 278 Query: 302 PKIVWLRETIKNLYAS 317 I ++ I+ +YA Sbjct: 279 KYISLTKQLIREMYAE 294 >UniRef50_B1M8N3 Transcriptional regulator, LysR family n=35 Tax=Proteobacteria RepID=B1M8N3_METRJ Length = 332 Score = 220 bits (563), Expect = 4e-56, Method: Composition-based stats. Identities = 38/314 (12%), Positives = 89/314 (28%), Gaps = 20/314 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +D+ L L + + SV+KAA R+N+ A+S+ + +L LF G+ T Sbjct: 12 MDIAQLRTLIHVAELGSVSKAADRLNIAQPALSRQIRQLEQELGTDLFERHGRGMVITET 71 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 ++ + + M + D + + I+ L + + +P Sbjct: 72 GRAVLVHASRVMAEMEAIRDTVASGRTSFRGTVSVGTTPTVAEIVTVPLVTALRRTHPDL 131 Query: 127 TIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 ++L LD + RG++D+ S + + + + + Sbjct: 132 AVRLSAAYSGHILDWLQRGQIDVAVSYNPRRLHT----------LRIVPIMIETLLLVGP 181 Query: 186 KDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMA 245 + + + G E + + F+ + + Sbjct: 182 GGREEPGAPVPFAGLAGMDLVLPSPGHMLRDIAHDCARRAGIELRVVVEADSFQSLINLV 241 Query: 246 AQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIV 305 + P + L + + + Sbjct: 242 RA--GIGATVLPLAPVHAMVAAG------DLTAAPLTDPSPTRELVVAYPADRPVSRAAR 293 Query: 306 WLRETIKNLYASMA 319 + ET+ + A +A Sbjct: 294 LVGETVIGIAADLA 307 >UniRef50_Q0SCY7 Transcriptional regulator, LysR family protein n=3 Tax=Actinomycetales RepID=Q0SCY7_RHOSR Length = 331 Score = 220 bits (563), Expect = 4e-56, Method: Composition-based stats. Identities = 76/318 (23%), Positives = 130/318 (40%), Gaps = 22/318 (6%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 + +DLNL+ LL + RSVT+ A+ + +T +VS SL +LR F+D LF+ S GL+P Sbjct: 28 MADVDLNLIRTFVLLYETRSVTRTAELLFITQPSVSHSLRRLRRQFNDDLFIRSSDGLAP 87 Query: 65 TPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQIYQR 122 T L SM L + +++ + + H F + A + +L + + R Sbjct: 88 TVLAASMYPQLHQALEVIDETVSGVGHFDAETSDRTFRICATDLGEISLLPGVLAALETR 147 Query: 123 YPQATIKLRNWD-YDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPC 181 P +++ D + + + +G D + + LF + Sbjct: 148 APGCAVQVTPLDFASAAEELRQGRADAVICTPRIDAP----------DLRRDPLFREGYV 197 Query: 182 VWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQS 241 HP + LD FL HI + D L +GR R IA+ +P F Sbjct: 198 GLCALGHPRIGVEPGLDDFLAERHIVVDAAAG-HVDADQALARMGRRRDIAVRVPHFAVL 256 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 + AQ +L + R + + + + ALP+ V +L +R + Sbjct: 257 PELVAQTRHLAV-VPSRVAELFTRSSPVRTFALPVEIPN-------VEVSLFTVRRALPS 308 Query: 302 PKIVWLRETIKNLYASMA 319 P + WLRE I ++ + A Sbjct: 309 PGVDWLRELIADVLQAPA 326 >UniRef50_A6VSJ2 Transcriptional regulator, LysR family n=28 Tax=Proteobacteria RepID=A6VSJ2_MARMS Length = 328 Score = 220 bits (563), Expect = 4e-56, Method: Composition-based stats. Identities = 81/317 (25%), Positives = 131/317 (41%), Gaps = 19/317 (5%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 ++ +DLNLL+ L L+ E+ V++AA+R++ + A+S +LA LRA F+DPL V L Sbjct: 21 NNLRRIDLNLLVTLHALLVEKHVSRAAQRLHKSQPAISHALANLRAIFNDPLLVRRTGKL 80 Query: 63 SPTPLMVSMEQNLAEWMQMSNLL-LDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQ 121 T + L E + L T F LA ++L L + + Sbjct: 81 ELTSRANELLPTLTEALHQLGALIEQPTFESTQAKRVFRLAMSDYGSRVVLPGLIQILRS 140 Query: 122 RYPQATIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 R P +++ L + GE+D+ F S L + LF + Sbjct: 141 RAPGIDLQVIQGSRTSMLTGVYDGEIDMAFGVFNSP---------LSDELHTHTLFIEHF 191 Query: 181 CVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQ 240 K+ + +L PHI + + +++ ++N L G R IAM+LP + Sbjct: 192 ICAADKNTLPKTGSLEKTQWLSRPHILVAMQTNESNEIENALHREGVSRRIAMTLPHWGV 251 Query: 241 SLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 + M A D +L A A R + + L L P P D F+++WH R Sbjct: 252 ASHMVANTDLILTA-ARRSFDLFLEDSPLQLFTPPYPID-------PFKFSMVWHSRRES 303 Query: 301 NPKIVWLRETIKNLYAS 317 + WLR TI + Sbjct: 304 DAGHNWLRHTIIEMLRE 320 >UniRef50_Q47V10 Hydrogen peroxide-inducible genes activator n=1 Tax=Colwellia psychrerythraea 34H RepID=Q47V10_COLP3 Length = 299 Score = 220 bits (563), Expect = 5e-56, Method: Composition-based stats. Identities = 40/314 (12%), Positives = 85/314 (27%), Gaps = 28/314 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 + L L L + + + KAA+ V+ +S L KL L + TP Sbjct: 2 IKLRDLEYLTAIDKHKHFGKAAQSCFVSQPTLSGQLMKLEEQLGLQLVERHRRNVMLTPA 61 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHH-QTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + + +Q + P L L +L + + + P Sbjct: 62 GEQLVKEARKVLQAAGQFESCAKALLDPFAGDLHLGLIPTLAPYLLPHIMADLNKALPNI 121 Query: 127 TIKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 L L + G++D+ + LF + + Sbjct: 122 NFFLHENQTKVLLQELDEGKLDVLILPYLDEMDK----------FESYQLFDEPLMLATP 171 Query: 186 KDHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 K+H + +L +++ G + + E M Sbjct: 172 KNHRLANKKDLSLSDLHDEKILTLADGHCLKDQAMGYCFSAGAKEDNSFQATSLETLRHM 231 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 A + + P N + + + Q +L+ S Sbjct: 232 VAS--GMGITLLPALAAQGNLASDT------IHYGQFQAPVPVRGISLVIRPNYSR---- 279 Query: 305 VWLRETIKNLYASM 318 + ++++ AS+ Sbjct: 280 ---MQCVRSIVASV 290 >UniRef50_D2ATF2 LysR family transcriptional regulator n=2 Tax=Actinomycetales RepID=D2ATF2_STRRD Length = 297 Score = 220 bits (563), Expect = 5e-56, Method: Composition-based stats. Identities = 46/311 (14%), Positives = 100/311 (32%), Gaps = 26/311 (8%) Query: 10 LNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMV 69 L L +L +E +AA+R+ + +S+ + +L PLF P ++ TP Sbjct: 8 LQQLHAFAILAEELHFGRAAERLGIAQPPLSQQIRRLEVKVGHPLFTRGPGRVTLTPAGH 67 Query: 70 SMEQNLAEWMQMSNLLLDKPHH-QTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQATI 128 + + + LD + + + L + +L L + RYP + Sbjct: 68 ELLPAARRALDEIAIGLDAARRTGNGEAGRLRIGFSASLALTLLPGLLRGYRDRYPGVDM 127 Query: 129 KLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKD 187 ++R + A+ +DIG + E + S+ L Sbjct: 128 EIREMTTAPQVAALREHVIDIGLLREPPDEP----------GLVTETILSEEFVAILPTA 177 Query: 188 HPALHQT-WNLDTFLRYPHISICW--EQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 HP Q ++ P + + + + +V + G E + E++ + Sbjct: 178 HPLAGQRVVSIKALADEPFVLLPRSAGPTVHDQILDVCRSAGFEPRLGQHAVEWQTVSAL 237 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 L ++ AP + + + + + + W + NP + Sbjct: 238 VEA--GLGVSLAPASIR--------RIRLKGIAYRRIEPNTARSTVAMTWRRD-DRNPLV 286 Query: 305 VWLRETIKNLY 315 +N+ Sbjct: 287 PRFLAAARNVA 297 >UniRef50_B4D9T5 Transcriptional regulator, LysR family n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D9T5_9BACT Length = 307 Score = 220 bits (562), Expect = 5e-56, Method: Composition-based stats. Identities = 48/311 (15%), Positives = 101/311 (32%), Gaps = 26/311 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +DL L Q + +E S ++AA+R+ + A+S+++ ++ A P+ + +S TP Sbjct: 1 MDLRHLRYFQAVAEELSYSRAAERLRIAQPALSRAVQEIEAELGGPVLDRNRRKVSLTPA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHH-QTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + + A + + + +F L P L L + QRYP+ Sbjct: 61 GLVLLRETAIVFERWEEAMRRVRRTAAGEEGEFRLGYIGPPTQPFLGRLLAEYRQRYPRV 120 Query: 127 TIKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + L + + + + +G + F+ S + + L + + Sbjct: 121 AVHLEERTPERVWEMLAKGRLSAAFTRPVSAAPAS--------GLRTLGLRQERFGAVVP 172 Query: 186 KDHPAL-HQTWNLDTFLRYPHISICWEQSD--TWALDNVLQELGRERTIAMSLPEFEQSL 242 HP +T + R P + + + + +E G +A + L Sbjct: 173 PSHPLATRKTMSWKLLAREPLVILARREGVGSHDGILAACREAGFAPRLAYTPSLIGTVL 232 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 + + P L +PL + L P Sbjct: 233 SYVEAGAGVGI--VPDSVV----TPDFKLRFIPLQPVVTVPLVLVWQ-------EREDTP 279 Query: 303 KIVWLRETIKN 313 + RE + Sbjct: 280 AVQRFRELVAQ 290 >UniRef50_Q7WC66 LysR-family transcriptional regulator n=3 Tax=Bordetella RepID=Q7WC66_BORPA Length = 320 Score = 220 bits (562), Expect = 5e-56, Method: Composition-based stats. Identities = 39/321 (12%), Positives = 101/321 (31%), Gaps = 23/321 (7%) Query: 2 KKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLG 61 + + ++L LL L+ + S +AA+ + + +AV+ + +L A LF + Sbjct: 6 SRPLPNINLKLLHTFMLVAEHCSFRQAAELSHRSQAAVTGQIKQLEAQLGVDLFHRTTRQ 65 Query: 62 LSPTPLMVSMEQNLAEWMQMSNLLLDKPHH-QTPRGLKFELAAESPLMMIMLNALSKQIY 120 + T + ++ + L + + + L+ + + L + Sbjct: 66 VRLTAEGAQLLESARRAVHEMENGLRQIQETVDLKRGRIFLSCSTTVSSTRLAPILAAFE 125 Query: 121 QRYPQATIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 + YP + +R D + + R E D G D+E + ++ Sbjct: 126 RDYPGVEVFVRELTSGDMFETVRREEADFGIGP-----------IMELPEFDFEPILTEN 174 Query: 180 PCVWLRKDH-PALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEF 238 + ++ P + L P + + + +D+ + G + Sbjct: 175 LYAVVPRNLFPDTAEQITLARLASMPLLLLNPGTALRALIDDTARSRGLTINTKFQFSQA 234 Query: 239 EQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRN 298 + + M L A P + ++ ++ ++ + Sbjct: 235 QTLISM--ATAGLGAAVLPAMVLPAKPHKDVQVLP-------IASPRMTRDVAIVRLRHR 285 Query: 299 SHNPKIVWLRETIKNLYASMA 319 P L + +++L + Sbjct: 286 KLTPAAARLAQLVRDLIHGPS 306 >UniRef50_Q1LGR3 Transcriptional regulator, LysR family n=3 Tax=Burkholderiales RepID=Q1LGR3_RALME Length = 304 Score = 220 bits (562), Expect = 5e-56, Method: Composition-based stats. Identities = 44/309 (14%), Positives = 94/309 (30%), Gaps = 27/309 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +DL L L +E +AA R+ +T +S ++AKL A L + ++ T Sbjct: 1 MDLRQLRYFVALAEELHFGRAAARLAITQPPLSFNIAKLEASLGVQLLQRTTREVALTAA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKP-HHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + + + ++ + + ++ L + +P Sbjct: 61 GKEIYKEALKILALTANARELAGRAARGEIGAVHVGFVGSAVLTPLGERIRAFGAIHPDV 120 Query: 127 TIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + L + + +DA+ +DIG +P I L + L Sbjct: 121 DVVLHELNSFEQIDALQARHIDIGIIHPRV----------IPNGIASHSLHGEHFICLLP 170 Query: 186 KDHPALH-QTWNLDTFLRYPHISICWEQS--DTWALDNVLQELGRERTIAMSLPEFEQSL 242 DHP +T ++ + S + + +G I + Sbjct: 171 ADHPLARDRTIDVRELRHDDFVLFPRHFSPEFHDQIVALCASVGFTPNIRHQVRHMLTIA 230 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALP-LPFDESQQKKLEVPFTLLWHKRNSHN 301 + A+ ++ PR + +V LP L ++ +W + Sbjct: 231 TLVAKRFG--VSIVPRS---------VDVVTLPNLACRPLGKQATPSELVGIWRDDEQGS 279 Query: 302 PKIVWLRET 310 + L Sbjct: 280 AVLSMLHAL 288 >UniRef50_B8G0R2 Transcriptional regulator, LysR family n=3 Tax=Clostridia RepID=B8G0R2_DESHD Length = 322 Score = 220 bits (562), Expect = 5e-56, Method: Composition-based stats. Identities = 36/308 (11%), Positives = 97/308 (31%), Gaps = 23/308 (7%) Query: 12 LLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSM 71 + + + +++T AAKR++++ ++S + + + F + G++ T Sbjct: 5 QFVVFKEVADTKNITLAAKRLHMSQPSISLQIQNMENLYGARFFNRTNKGVTLTKAGEVF 64 Query: 72 EQNLAEWMQMSNLLLDKPHHQTPRGLKFE-LAAESPLMMIMLNALSKQIYQRYPQATIKL 130 ++ + + + + T + A + +L + +Y+ P K+ Sbjct: 65 YDHVNNILNILTVAQQQISVLTEDQRALIYIGATLTIGEYILPNILAYLYKIRPDVDFKV 124 Query: 131 RNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHP 189 + + +++ + + IG + I E + D V + HP Sbjct: 125 KIANTETISQEVIEKRIHIGLIEGPAPRN---------KEIVVEKFWQDELVVVVPSFHP 175 Query: 190 ALHQ-TWNLDTFLRYPHISICWEQSDTWALDNVLQELGRER---TIAMSLPEFEQSLFMA 245 + + L + I + L+E+G + + M L + + Sbjct: 176 WAARHSITLAELAKERLIMREEGSGTRKVTELALKEMGLDLSQINVTMELGSTQAIKKVV 235 Query: 246 AQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIV 305 A + + + L + Q + P +L + Sbjct: 236 AA--GIGITIISSLTVSRECENGL------FKVLKVQDSPVYRPLNMLTLAHTTQTKDER 287 Query: 306 WLRETIKN 313 +L + + Sbjct: 288 FLISMLHD 295 >UniRef50_B2JSK1 Transcriptional regulator, LysR family n=1 Tax=Burkholderia phymatum STM815 RepID=B2JSK1_BURP8 Length = 299 Score = 220 bits (562), Expect = 5e-56, Method: Composition-based stats. Identities = 41/313 (13%), Positives = 83/313 (26%), Gaps = 28/313 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L L L + +AA+R++++ +S+ +A L LF + + T Sbjct: 1 MELRHLHYLVTLGETLHFGRAAERLHISQPPLSRQIALLEEELGVGLFDRTSRTVKLTAA 60 Query: 68 MVSMEQNLAEWMQMSNLLLD-KPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 Q+ E + L + A+ + YP+ Sbjct: 61 GEGFLQDAKEILASVERAKRNAISANLGHRGSLSLGFMFAAAFSIAPAILRAYTTEYPEV 120 Query: 127 TIKL-RNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + + + + +D+G ++ +F + L Sbjct: 121 HLHVGEAVPSLLIQDLRESRLDVGLMYPPGEMA----------GMETLTVFEEPLVAALP 170 Query: 186 KDHPALH--QTWNLDTFLRYPHISICWEQS--DTWALDNVLQELGRERTIAMSLPEFEQS 241 +HP + + E S + N + G + Sbjct: 171 LNHPLSGSDDPIDAVDLKDEQFLITRREASPYFHDTIINHCKTEGFVPKTFLETNYQHTL 230 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 + L +A R Q + L + V W+ RN N Sbjct: 231 ITFV--GQGLGVALVHRSMQTSLPT-NVKFRPL--------RNPPTVKLNATWNSRN-RN 278 Query: 302 PKIVWLRETIKNL 314 P + L Sbjct: 279 PCTDTFVQLAAKL 291 >UniRef50_B8J293 Transcriptional regulator, LysR family n=1 Tax=Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 RepID=B8J293_DESDA Length = 308 Score = 220 bits (562), Expect = 5e-56, Method: Composition-based stats. Identities = 51/313 (16%), Positives = 105/313 (33%), Gaps = 24/313 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++++ L + + + T+AA+ + +T AVS + L PLF S ++ T Sbjct: 1 MNIDHLKTFHKIAETGNFTQAARDLFLTQPAVSMQVQSLENSLGVPLFDRSRRKVNLTSE 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + + N + D+ + + L A + + L +QR+P Sbjct: 61 GRVLYEYTQRIFSLVNQMQDEFQSLSQLDTGRLVLGASAIMSAYYLPGYMVLFHQRHPGV 120 Query: 127 TIKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 T+ L + + + + RGE++IGF G + L + V Sbjct: 121 TLDLAVHNSHVIAEKVYRGELEIGFCGSSP----------SHPNLRAHFLHREPLIVVAG 170 Query: 186 KDHPALHQ--TWNLDTFLRYPHISICWEQSDTWALDNVLQEL--GRERTIAMSLPEFEQS 241 + + D L +P I T + + ER M++ E + Sbjct: 171 RKSALAQKDGPVCADDLLAHPFILREQGTRVTNKVQEWFKTHAGRPERPSFMTVDNMEVA 230 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 + + L + PRY L + L V ++L++ + + Sbjct: 231 KQLVI--NGLGVTALPRYAAALELAAGQ------LTQLRLESFDLHVNYSLVYMEGQRLS 282 Query: 302 PKIVWLRETIKNL 314 + + L Sbjct: 283 RTVTHFLALLFEL 295 >UniRef50_A5F4D9 Transcriptional regulator, LysR family n=68 Tax=Gammaproteobacteria RepID=A5F4D9_VIBC3 Length = 327 Score = 220 bits (562), Expect = 5e-56, Method: Composition-based stats. Identities = 93/309 (30%), Positives = 157/309 (50%), Gaps = 9/309 (2%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 + +DLNLL+CL++L++E SVT+AA R+ ++ SAVSKSLAKLR FDDPLFV + GL+ Sbjct: 20 LARIDLNLLVCLKVLIEELSVTRAAARLCLSQSAVSKSLAKLREQFDDPLFVRTSYGLNA 79 Query: 65 TPLMVSMEQNLAEWMQMSNLLLDKP-HHQTPRGLKFELAAESPLMMIMLNALSKQIYQRY 123 TP + ++ L + LL +F++AA + +++ I++ Sbjct: 80 TPKALFLKPKLDVLVNQLELLTQPAHFSPQSSEYRFQIAAVESVYPLIMPYFLPTIFRHG 139 Query: 124 PQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVW 183 P +I W + + GE+D G +G++ +L P I + ++ D Sbjct: 140 PHLSISTHAWTEQTFRKLQVGELDFGLTGKDIDINDAKLTLLPPADICEQEIYRDNQRCV 199 Query: 184 LRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 +R+ HP L WNL ++L H+ + + +D W LD L +LG ER IA+++P+F + Sbjct: 200 VRRGHPVLQYDWNLSSYLNLRHVQVRCDGNDRWLLDYRLADLGYERDIAITVPDFNSAAS 259 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 + D + + + + L + LP+ F +TL WH+ ++P Sbjct: 260 LCTYTDFI-FTAPSHFTHWVAKQMDLVELPLPMEFPPMA-------YTLFWHRERENDPA 311 Query: 304 IVWLRETIK 312 + WLRE I+ Sbjct: 312 LRWLRELIQ 320 >UniRef50_A8LCN9 Transcriptional regulator, LysR family n=7 Tax=Actinomycetales RepID=A8LCN9_FRASN Length = 311 Score = 220 bits (562), Expect = 5e-56, Method: Composition-based stats. Identities = 51/312 (16%), Positives = 97/312 (31%), Gaps = 24/312 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L + +ER+ T+AA+R +V+ S VS + +L LF S + TP Sbjct: 1 MELRQLEYFVAVAEERNFTRAAERSHVSQSGVSAQIRQLERDLGAELFDRSGRAATLTPA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + + + L T + + + + L +P Sbjct: 61 GEAALECARAALAATAALRQAVGEVTGLIRGQLTVGMVTGCTVTPLFDALAGFRGAHPGV 120 Query: 127 TIKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + L + D L + G VD+ G + P + + + ++ Sbjct: 121 DVSLLEGNSDQLVSEVRAGTVDLALVG---------SAAPAPEGLGALTIVEERLVAAVQ 171 Query: 186 KDHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 H + L R+P + + D Q I + + + Sbjct: 172 PGHLLAERPRITLRDLCRHPIVCMPPGTGLRTVFDRACQTCDLHPRITLQASAPDAIADL 231 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 L +A + LVALP+ L TL+W +P + Sbjct: 232 --AGRGLGVAVLSTSMVA---AYGDRLVALPVD-----GLDLPALLTLVWRA--PASPAV 279 Query: 305 VWLRETIKNLYA 316 L + +A Sbjct: 280 RELLAHARRAFA 291 >UniRef50_Q31IK2 Transcriptional regulator, LysR family n=2 Tax=Piscirickettsiaceae RepID=Q31IK2_THICR Length = 314 Score = 220 bits (562), Expect = 5e-56, Method: Composition-based stats. Identities = 51/309 (16%), Positives = 102/309 (33%), Gaps = 21/309 (6%) Query: 6 TTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPT 65 L L + + + S +KAA+ +++T VS + KL + PLF T Sbjct: 10 RNATLRQLQVFESIARHNSFSKAAEELHLTQPTVSMQVKKLAEILESPLFEQIGRKAHLT 69 Query: 66 PLMVSMEQNLAEWMQMSNLLLDKPHHQTP-RGLKFELAAESPLMMIMLNALSKQIYQRYP 124 ++ + +Q ++ K +H G + S + + + Q YP Sbjct: 70 EAGKALYDSANNILQQLSIAEQKINHLKGFSGGSVKFTVIST-AQYFVPKVIQNFTQSYP 128 Query: 125 QATIKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVW 183 TI +R + + ++ I + D G+ L ++ L + Sbjct: 129 DVTIIMRVGNKESLIERINNNKDDFYLLGQPPE----------DLNVESSQLSVNPLAFL 178 Query: 184 LRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 DHP + + ++ + P + ++ V E + I M L E Sbjct: 179 ANSDHPLVGKQLSIQDLVNEPFLMRETGSGIRAQIEKVFGEFEFQPNIKMVLGGNEPIRL 238 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 Q + +A+ P + NQ + + + + L + K + Sbjct: 239 GLLQNLGITVASVPTLMEEINQGK--------ISILNVKGFPINRHWYLAYPKGKVLSIA 290 Query: 304 IVWLRETIK 312 L E +K Sbjct: 291 AEKLIELLK 299 >UniRef50_C9ABQ3 Transcriptional regulator n=1 Tax=Enterococcus casseliflavus EC20 RepID=C9ABQ3_ENTCA Length = 299 Score = 220 bits (562), Expect = 5e-56, Method: Composition-based stats. Identities = 47/314 (14%), Positives = 111/314 (35%), Gaps = 26/314 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L +L +E T+++K +N+T ++S +++ L LF + ++ T Sbjct: 1 MNLQHLKYFDVLAREEHYTRSSKLLNITQPSLSNAISLLEDELGVQLFEKNGRNVALTKP 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQ-- 125 +++ ++ + +D + A L + ++KQ + P Sbjct: 61 GKIFHEHVIRTLENLDSGIDTVTKISKGFGHISFAFLQVLGTSYVPKVTKQFLEANPGKK 120 Query: 126 ATIKLR--NWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVW 183 + + +++ + D+G ++ + I++ + S V Sbjct: 121 IQFEFHSDSVSTETVQGLKTLRYDLGICSYITNEPT----------IEFVPIASQELVVI 170 Query: 184 LRKDHPALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 +HP +L+ YP I + + +D++ Q +A + + Sbjct: 171 TALNHPLAQFDEVSLEDLAEYPQIIFSKKSALREIIDDLYQRNNVSYQVAYEVKIDQVIA 230 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 + +Q L +A P L +LPL + + E F L ++K P Sbjct: 231 GLVSQN--LGIAIIPNMTM---------LDSLPLKRIKLKDIGWERYFYLAYNKETYLPP 279 Query: 303 KIVWLRETIKNLYA 316 + ++ I Sbjct: 280 VVSNFKDFILAHAD 293 >UniRef50_B2HXW5 Transcriptional regulator n=12 Tax=Proteobacteria RepID=B2HXW5_ACIBC Length = 294 Score = 220 bits (562), Expect = 5e-56, Method: Composition-based stats. Identities = 41/312 (13%), Positives = 96/312 (30%), Gaps = 27/312 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 + L L+ + +S T A+++ ++ SAVS +L L + L + + T Sbjct: 1 MTFTQLEIFALIAELKSFTATAEKLGISQSAVSHALKSLEQQWGINLISRTQSDIELTTT 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAE-SPLMMIMLNALSKQIYQRYPQ 125 + ++ E + +S+ L + + + + + +L + + Q YP+ Sbjct: 61 GQQLLTHVKELLSISDTLEKEVAAIHGLNEGTLRIGSFGASSSIYLLPEILEAFRQCYPK 120 Query: 126 ATIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 I + + + + +++GF D L D + Sbjct: 121 IEIYIDEGEDKEVAQWLLERRIEVGFLIMP------------DERFDTFPLIEDRFVALI 168 Query: 185 RKDHPALHQ-TWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 +P Q + P I ++ +L+ + I + + + Sbjct: 169 PSGYPLAQQLYIDPAQLENCPFIMTMAGS--RHQVELILKNFNVKPDIKFYVSQILSIVS 226 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQ-LPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 M L ++ L +V P L+ L + +P Sbjct: 227 MVHNQ--LGISIVSDMVITKELLSLYPNVVKRPFK------PNLKRSIGLAVKNKKHISP 278 Query: 303 KIVWLRETIKNL 314 + E + + Sbjct: 279 AVKAFIEVAQEV 290 >UniRef50_C9YD50 RuBisCO operon transcriptional regulator n=1 Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9YD50_9BURK Length = 326 Score = 220 bits (562), Expect = 6e-56, Method: Composition-based stats. Identities = 47/326 (14%), Positives = 99/326 (30%), Gaps = 33/326 (10%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 + L L L + + S ++AA+ +NVT AVS + +L L V + + Sbjct: 19 HRLRNLTLRQLRLFEAVATHLSYSRAAEVMNVTQPAVSMQIQQLETEVGLQLLVKTGRKV 78 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG--------LKFELAAESPLMMIMLNA 114 S + M + + L + P L A Sbjct: 79 SLSQAGEEMLRQCRRILNQVLLAEESMGAFHPAEGGHGGLLHLGVV-----SSAHYFAPA 133 Query: 115 LSKQIYQRYPQATIKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYE 173 L +R+P KL + L + ++D+ +G ++ E Sbjct: 134 LLMAFAERWPGVKFKLTVDRRETILAMLQGHQLDVAIAGYPPSEA----------DVEAE 183 Query: 174 VLFSDVPCVWLRKDHPALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIA 232 + C+ +HP + + D P I + ++++Q + ++ Sbjct: 184 TFAQNPHCIVASANHPLARKRRVHWDALRNEPFIFREPGSATRHFFEHLIQAQSLQVRLS 243 Query: 233 MSLPEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTL 292 M L E + ++ + L + + + + L Sbjct: 244 MELSGNETIKQAVIA--GMGISFLSAHTFQVEFEAG------KLAVLQMEDMPKMLDWCL 295 Query: 293 LWHKRNSHNPKIVWLRETIKNLYASM 318 L + +S + RE + A++ Sbjct: 296 LHRRDSSLSGVNQAFREFVLTEGAAL 321 >UniRef50_C7NJ53 Transcriptional regulator n=1 Tax=Kytococcus sedentarius DSM 20547 RepID=C7NJ53_KYTSD Length = 327 Score = 220 bits (562), Expect = 6e-56, Method: Composition-based stats. Identities = 48/310 (15%), Positives = 105/310 (33%), Gaps = 16/310 (5%) Query: 13 LLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSME 72 L ++ + ++ S T AA + T A+S+ + +L PL + T + Sbjct: 7 LRIMRAISEQGSFTAAAHSLGYTQPAISQMVRRLEGRIGTPLVERQGRTVRLTQAGQVLA 66 Query: 73 QNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNALSKQIYQRYPQATIKLR 131 ++ + + + + + +AA ++ + + +P I+L Sbjct: 67 RHAVTVLSLLDTAEQELSALAGLQSGRVRVAAFPSSSAALVPHALRDLRAEHPAIEIQLT 126 Query: 132 NW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPA 190 +SL A+ G D+ + S + L ++ + +D + L +DHP Sbjct: 127 EAEPPESLAALRDGRCDLAVAFSHSGTPVGREVDDL-AGLEIRDILTDEMLIALPEDHPQ 185 Query: 191 L-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQPD 249 T L P I+ C L ++ QE G + ++ L + + Sbjct: 186 AGGDTVALAALADDPWIAGCARC--RGHLMHLGQEAGFIPRVEFQTEDYVAVLGLVSA-- 241 Query: 250 NLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWLRE 309 L A PR + + + + L ++ E + P + + + Sbjct: 242 GLGAALVPRMVLRHVRHEGVVALPL--------SQRSERTIHAVTTADLLRVPAVAAMMD 293 Query: 310 TIKNLYASMA 319 ++ MA Sbjct: 294 SLCRAAGEMA 303 >UniRef50_B9KUK0 Transcriptional regulator n=2 Tax=Rhodobacteraceae RepID=B9KUK0_RHOSK Length = 300 Score = 220 bits (561), Expect = 6e-56, Method: Composition-based stats. Identities = 41/309 (13%), Positives = 93/309 (30%), Gaps = 22/309 (7%) Query: 7 TLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTP 66 +L L ++ S KAA+ +N++ A+++ + + LF S +S T Sbjct: 4 NFELLDLRTFLAIIDLGSFRKAAEALNISQPALTRRMQAFEYKLGNQLFERSTRNVSLTN 63 Query: 67 LMVSMEQNLAEWMQMSNLLLDKPHHQ-TPRGLKFELAAESPLMMIMLNALSKQIYQRYPQ 125 + +E + + R +A + L ++ + +P+ Sbjct: 64 VGREIEPMARRTLAEIDEQFGSLSDAGATRSGFISIACIPTSTLSFLPSVIGRFQTDFPR 123 Query: 126 ATIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 A ++ + LD++ G D G + + LF D Sbjct: 124 ARFRILDNSSAQVLDSVFDGTADFGLTF----------TGQSDSQFKFTALFEDEFVALC 173 Query: 185 RKDHPALHQ-TWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 P + P I + + +D L + G + A + ++ Sbjct: 174 APGDPIAQKARIAWSELNTLPLIGVNRSSGNRTLMDTRLSKDGIKLNWAHEVNHVIAAVG 233 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 + Q + ++ PR + L ++ L + +L Sbjct: 234 LVRQ--AVGVSVVPRMAYDPRLMGDLRIIPL-------VNPVVSRRLGILERSGARQGRL 284 Query: 304 IVWLRETIK 312 + + +K Sbjct: 285 VTAFLDLLK 293 >UniRef50_Q2RQL6 Transcriptional regulator, LysR family n=2 Tax=Rhodospirillaceae RepID=Q2RQL6_RHORT Length = 301 Score = 220 bits (561), Expect = 6e-56, Method: Composition-based stats. Identities = 41/306 (13%), Positives = 93/306 (30%), Gaps = 24/306 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 L L + + + +AA+ V+ +S +A++ A+ LF + + TP+ Sbjct: 2 FTLRQLRYIVAVADTLNFRRAAEVCLVSQPTLSVQIAEVEAFLGLTLFERTRRSVVLTPI 61 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQT-PRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + ++ +N ++D P L + L +L + +++P Sbjct: 62 GREIAERARGVLREANEIVDLARSLRAPLSGPLRLGVIATLGPYLLPYVLSAFREKHPSL 121 Query: 127 TIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + LR + GE+D+ +D LF + + Sbjct: 122 RLYLREDPSLRLERRLRAGELDLILVDMPID----------DAGLDIMDLFFEPLWLAAP 171 Query: 186 KDHPALHQ-TWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 DH + +++ + + + ++ + +G + M Sbjct: 172 PDHALADRTRVSVEDLAGRDLLLLEEGHCLRDEVLDLCRRVGAREHGGFQATSLDTLRQM 231 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 A + LA P + +P L W K + ++ Sbjct: 232 VAS--RIGLALLPDLYVAAEAAQDPNIRMIPFSAPPV------RRVGLAWRK---TSARV 280 Query: 305 VWLRET 310 RE Sbjct: 281 AEFREF 286 >UniRef50_A0LJJ0 Transcriptional regulator, LysR family n=2 Tax=Bacteria RepID=A0LJJ0_SYNFM Length = 308 Score = 220 bits (561), Expect = 6e-56, Method: Composition-based stats. Identities = 45/314 (14%), Positives = 105/314 (33%), Gaps = 19/314 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L +++ S KAA +++ S++S + L LF + T Sbjct: 1 MELRQLKTFRVVANLLSFNKAAGQLHYAQSSISAQIQILEEELGVQLFDRLGKRVQLTEA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQAT 127 V + Q + + + + + + L + L A+ ++ + R+P+ Sbjct: 61 GVRLLQYANKILDLVDETNSMVNRVNEPTGSLTIRIPETLGVRRLPAVLREFHSRFPRVR 120 Query: 128 IKLRNWDYDSLD-AITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRK 186 + + LD + +G D+ F S +D L + + Sbjct: 121 LNFITCALEGLDKDLRKGITDLAFL---------LAESINAADLDMATLGFEPVVLVAAP 171 Query: 187 DHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMA 245 DHP + + + + S L+ +L++ R E Sbjct: 172 DHPLAAKRKVHTRDLTGSTILLSRVDCSYRKVLEQILEQEEVTRFNRFEFSSVEVIKHCV 231 Query: 246 AQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIV 305 + ++ P + + +V LP + ++V ++W++ +P + Sbjct: 232 MA--GVGISVLPSIAVA-EDVARKRMVVLP-----WSEGGIQVAVLMVWYRERWISPTLQ 283 Query: 306 WLRETIKNLYASMA 319 + K ++A A Sbjct: 284 AFMDVTKKVFAQAA 297 >UniRef50_Q1DBZ6 Transcriptional regulator, LysR family n=1 Tax=Myxococcus xanthus DK 1622 RepID=Q1DBZ6_MYXXD Length = 311 Score = 220 bits (561), Expect = 7e-56, Method: Composition-based stats. Identities = 39/315 (12%), Positives = 93/315 (29%), Gaps = 24/315 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 + L + + + AA+ + ++ S +S+ L L A L V +P G T Sbjct: 1 MTSEQLRAFLEVARAGRLATAARGLGLSQSGLSRQLQSLEAALGTRLLVRTPGGTVLTDA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + + + L + +L + +++P+ Sbjct: 61 GERFLPHAQRALDALTAGTSELERLSGTPHGVVSLGTLHTVGAYLLPDIIPAFARQFPEV 120 Query: 127 TIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 +L + + RG +D+ + + L+ + + + Sbjct: 121 RPRLSEGLAPAMEEGVARGALDLAILSLPVRRA----------DLVAQRLWEESLVLAVP 170 Query: 186 KDHPA--LHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 + H + +D + P + I A++ + G +A+ E Sbjct: 171 RGHRLTKSGKPVTMDEAVEEPWVVIPGMSGTR-AMEAACEARGVTPRLAVETDNAEAMRR 229 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 M + L +A P+ + +V L + ++ L+ Sbjct: 230 MVER--GLGVAMVPQLMARDHHAQGFDVVPL-------ARAGVKRQVALIHRGEGYLTAA 280 Query: 304 IVWLRETIKNLYASM 318 L+ I +M Sbjct: 281 ARALKSFIVESVRAM 295 >UniRef50_A4XPG0 Transcriptional regulator, LysR family n=1 Tax=Pseudomonas mendocina ymp RepID=A4XPG0_PSEMY Length = 294 Score = 220 bits (561), Expect = 7e-56, Method: Composition-based stats. Identities = 45/307 (14%), Positives = 95/307 (30%), Gaps = 22/307 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L+ L + + S++ A+R++++ AV++ + +L A D LF P G+ T Sbjct: 1 MNLHHLKVFLAVAEAGSISAGAERLHISQPAVTREIRELEANLDLRLFDRLPRGVQLTEG 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + + L A + L +L L + +PQ Sbjct: 61 GQRLLDYARRIFALEQAAERDLRDFAQLEQGELHLGASATLGAYLLPPLISRFRALHPQI 120 Query: 127 TIKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + L + +++ + G + +GF D+ +L D + Sbjct: 121 FVSLEVSNTEAVTRQLDDGRISLGFVEGPFAQA----------DYDHRLLARDALLPVVA 170 Query: 186 KDHPALH--QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 HP YP ++++ + G E M++ E Sbjct: 171 PRHPLARTAAPLQASELQAYPLYMREPGSGARASVEHAYRVHGLEPRAGMAIGSTEALKR 230 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 + A + + + L Q ++E +LW S +P Sbjct: 231 LLADGQGIAWLSQRVVERELASGELQRL--------TVQDLQIERELHVLWRPGASLSPA 282 Query: 304 IVWLRET 310 Sbjct: 283 PAAFLAL 289 >UniRef50_D2QVQ4 Transcriptional regulator, LysR family n=22 Tax=Bacteroidetes RepID=D2QVQ4_9SPHI Length = 298 Score = 220 bits (561), Expect = 7e-56, Method: Composition-based stats. Identities = 52/316 (16%), Positives = 105/316 (33%), Gaps = 26/316 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 D L + + S TKAA + VT A++K + +L + LF +S T Sbjct: 2 FDFR-LTVFYTVARRLSFTKAAAELFVTQPAITKHIQELESQLGTALFDRRGNQISLTTA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + ++ M + + + + G + L A S + ++ A+ + +++P Sbjct: 61 GNVLLRHAETIMGVYRQIEFDLNELKGKPGGRLRLGASSTIAQYVIPAVLARFGEQFPDV 120 Query: 127 TIKLRNWDYDSLD-AITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 T+ L + + + ++ A+ E+D+G +H + Y D + R Sbjct: 121 TLSLLSGNTEQIEQALLHDEIDLGLVEGRTH----------HSDVRYTPFVKDELVLVCR 170 Query: 186 KDHPALHQ-TWNLDTFLRYPHISICWEQSDTWALDNVLQELGRE---RTIAMSLPEFEQS 241 DHP + LD P + +++ L+ G AM L E Sbjct: 171 ADHPLAGRDEITLDELKTVPLVLREPGSGSREVVEHALRGAGLRLAELQQAMQLGSTEGI 230 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 + + A + L L + +E F + + S Sbjct: 231 KTYLSSSSGM--AFVSIFAVPNELKSG-TLRVLDVA-----DLTIERDFYAIQLQGMSEG 282 Query: 302 PKIVWLRETIKNLYAS 317 ++ Y + Sbjct: 283 -LADTFMRFVRRQYNA 297 >UniRef50_A6X7A0 Transcriptional regulator, LysR family n=1 Tax=Ochrobactrum anthropi ATCC 49188 RepID=A6X7A0_OCHA4 Length = 308 Score = 220 bits (561), Expect = 7e-56, Method: Composition-based stats. Identities = 41/313 (13%), Positives = 104/313 (33%), Gaps = 22/313 (7%) Query: 9 DLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLM 68 L + C Q +++ + ++AA+R+ T + +S ++ L D LF + +S T Sbjct: 4 TLRQIECFQAVVELGNFSRAAERVRTTQANLSHTIRDLETVLDARLFDRTTRRVSLTDAG 63 Query: 69 VSMEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQIYQRYPQAT 127 + + + + + + +AA L +L L +++ +P Sbjct: 64 RAFAEGALAGLAEIDRAAEVVRDLGKLRRGQVSIAAPPLLCTTVLPHLVRRVADEHPNLV 123 Query: 128 IKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRK 186 IK+ + + + + + G D+G S ++ ++ D +++ Sbjct: 124 IKIEDVGPEIVIEQVRNGRCDLGVG----------TFSGEDSDVESQMALRDQLMIFVSP 173 Query: 187 DHPALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMA 245 H + P I++ + + + ++ M + + L + Sbjct: 174 HHDFAGHEQVRWAELDDQPIITLTQKSNIRLLTEIGFEQAKLALRPHMEVNQIHSVLSLV 233 Query: 246 AQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIV 305 + + P Y + + L + L+ + + V Sbjct: 234 EVNAGIAV--LPAYAFTALRGRGIVARPL-------TDPAIVREVRLITPRDREQSAATV 284 Query: 306 WLRETIKNLYASM 318 +R ++NL M Sbjct: 285 AVRSILRNLLRQM 297 >UniRef50_A7IDL3 Transcriptional regulator, LysR family n=2 Tax=Xanthobacteraceae RepID=A7IDL3_XANP2 Length = 308 Score = 220 bits (561), Expect = 7e-56, Method: Composition-based stats. Identities = 41/319 (12%), Positives = 89/319 (27%), Gaps = 27/319 (8%) Query: 1 MKKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPL 60 M + DL + LL +E ++AA+R ++T A+S+ + L PL + Sbjct: 8 MNVPMR-FDLRHVRAFVLLSEELHFSRAAQRAHMTQPAMSRLIRDLEQDVGVPLIARTTR 66 Query: 61 GLSPTPLMVSMEQNLAEWMQMSNLLLDKPHH-QTPRGLKFELAAESPLMMIMLNALSKQI 119 + T + + ++ + + + + L Sbjct: 67 SVELTEAGKAFLADGRAALERLERAVTNARRTASGEVGLLRIGYMDFAINGRLPEFLSAF 126 Query: 120 YQRYPQATIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSD 178 + P+ +++ +A+ +DIGF S E + Sbjct: 127 SRYRPEIRLEISFIPTFKQQEALLAERIDIGFMIGPFEEPSMESYTFDDN---------- 176 Query: 179 VPCVWLRKDHPALH-QTWNLDTFLRYPHISICW--EQSDTWALDNVLQELGRERTIAMSL 235 L HP + +T L P + + A ++ G I Sbjct: 177 RYVALLPITHPLSNVRTLRLSDLADQPFVLGSGENWGAFRNAFFSICHRAGFTPRITQEA 236 Query: 236 PEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWH 295 E + A + + C Q + + L ++ W Sbjct: 237 SSSEGIFGLVAAGAGVSV---YASCVRNLQRRGIVIRDLDDVSEKIV-------TVAAW- 285 Query: 296 KRNSHNPKIVWLRETIKNL 314 +P + + + + Sbjct: 286 ATPVRSPAVSIFTDFLLRV 304 >UniRef50_C6HY10 Transcriptional regulator, LysR family n=1 Tax=Leptospirillum ferrodiazotrophum RepID=C6HY10_9BACT Length = 303 Score = 220 bits (561), Expect = 8e-56, Method: Composition-based stats. Identities = 45/307 (14%), Positives = 90/307 (29%), Gaps = 24/307 (7%) Query: 12 LLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSM 71 L + + +S T+A + + +T AVS + L LF + + T + Sbjct: 5 QLKVFLKVAEYQSFTQAGEVLFLTQPAVSLQVKSLEKDLKVSLFERTGKKILLTEAGRKL 64 Query: 72 EQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQIYQRYPQATIKL 130 +Q + + A + +L L Q + + T L Sbjct: 65 LPLARSIIQQMEEAREVVRPLEDMPQGHLRIGASMTIGTYLLPPLLAQFLRANSRITASL 124 Query: 131 -RNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHP 189 + L + E+D+G E +D + L D + +HP Sbjct: 125 AVANTHQILHDLKASEIDLGLIEGEPTRTQGIS-------LDRKFLDHDRLVLIDSLNHP 177 Query: 190 ALH--QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERT---IAMSLPEFEQSLFM 244 L +LD + P I ++ L E M++ E + Sbjct: 178 LLPSSGPVSLDALRKVPFIGREPGSGTRQVIERELLEKNLPPDSFETVMTVDNPEAIKEL 237 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 A +A C ++ L VA+ + + ++ + +P Sbjct: 238 VA--LGSGVAFISSLCLRPHESGLLRTVAV-------EDFSPVRNLWIFVPQKKT-SPPA 287 Query: 305 VWLRETI 311 + + Sbjct: 288 DLFLQLL 294 >UniRef50_B9XK88 Transcriptional regulator, LysR family n=2 Tax=Verrucomicrobiales RepID=B9XK88_9BACT Length = 300 Score = 220 bits (561), Expect = 8e-56, Method: Composition-based stats. Identities = 46/311 (14%), Positives = 99/311 (31%), Gaps = 26/311 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L Q + +E S ++AA+R+++ A+S+++ +L A +F S + TP Sbjct: 1 MELRHLRYFQAVAEELSFSRAARRLHIAQPALSRAIKQLEAILGANVFERSRHHVRLTPA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHH-QTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + ++ L + + L P L L ++ +R+P Sbjct: 61 GSVLLRETTMLLEHFEESLRRVRRTAAGEEGELRLGYIGPPTQPFLGRLLREYRKRFPLV 120 Query: 127 TIKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 TI L + + + +G + + + + VL + + + Sbjct: 121 TIHLEERTPQRVWEMVAKGRLSAAITRPVLTNEAL--------GLRTVVLKQERLGIVVP 172 Query: 186 KDHPALHQT-WNLDTFLRYPHISICW--EQSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 HP + R P I + A+ + G +A + + Sbjct: 173 VAHPFAKRRYVPWTALAREPLIVLARREGMGLHDAVIAGCRRAGVTPRLAHTPSLIGTVM 232 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 + + T P + VP L+W + +P Sbjct: 233 SYVEACAGIGVVTESVAA------------PSPAVRFILLKPVQCVPLVLVWQEDED-SP 279 Query: 303 KIVWLRETIKN 313 + RE + Sbjct: 280 PVQRFRELLFE 290 >UniRef50_B9JQ31 Transcriptional regulator n=1 Tax=Agrobacterium radiobacter K84 RepID=B9JQ31_AGRRK Length = 296 Score = 220 bits (561), Expect = 8e-56, Method: Composition-based stats. Identities = 64/313 (20%), Positives = 120/313 (38%), Gaps = 22/313 (7%) Query: 9 DLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLM 68 DLNL+ + + SV+ AA ++N+T +VS +L++LR DD LF + G+ PT + Sbjct: 3 DLNLIRAFIAIYETESVSGAAVKLNLTQPSVSHALSRLRDMLDDTLFTRTRDGMKPTFVA 62 Query: 69 VSMEQNLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQIYQRYPQA 126 M + + P+ F+LA M L + ++ Q P+ Sbjct: 63 ERMYGIFRSALSEIETAIASRWSFDPKSSNQVFKLAFSDLGEMTFLPHILPRLSQEAPKV 122 Query: 127 TIKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 I++ + + L D G++D S E +F + + Sbjct: 123 GIEVVELEVEKLDDWFATGKIDAAIFNSTSAKVQS----------RSEPIFQERYVCLVS 172 Query: 186 KDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMA 245 HP + +L+ +L HI + +++ ++ +G R +++ LP F + Sbjct: 173 ARHPRIRDQVSLEQYLSEGHIVVSSHSG-HRQVEDQIRAIGAARQVSLRLPHFTGLHDIV 231 Query: 246 AQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIV 305 A+ + L R + + +PLP E L W + + Sbjct: 232 AKTELLA-TLPSRTAHMFASSGMVKYCTIPLPIP-------EFEVRLHWRETDGEIEAQA 283 Query: 306 WLRETIKNLYASM 318 WLRE +K+ + Sbjct: 284 WLREILKSCLQGL 296 >UniRef50_Q2GAY9 Transcriptional regulator, LysR family n=1 Tax=Novosphingobium aromaticivorans DSM 12444 RepID=Q2GAY9_NOVAD Length = 308 Score = 219 bits (560), Expect = 8e-56, Method: Composition-based stats. Identities = 57/316 (18%), Positives = 115/316 (36%), Gaps = 28/316 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +DL L + RS ++AA+ +N+ +S+++ L LF + L+ TPL Sbjct: 1 MDLRQLRQFLAVANARSFSRAAETLNIAQPPLSRTIRHLEEEIGGALFDRTARPLAMTPL 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKP-HHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + + + + D +F + + + L L + +R P Sbjct: 61 GQLLHEQARQILDRMGDMHDMMKAAAATERRRFTIGFVASTIYARLPELIRAFRKRAPDV 120 Query: 127 TIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + L + L A+ G +D+GF + AI +L ++ V L Sbjct: 121 ELTLVESSTLEQLAALKDGRIDVGFGR----------IRFEDPAIKRIILRNERLAVALP 170 Query: 186 KDHPAL--HQTWNLDTFLRYPHISIC--WEQSDTWALDNVLQELGRERTIAMSLPEFEQS 241 +DHP + L P I S + ++ ++ G E IA E + + Sbjct: 171 RDHPLALDDRPLTLKQVAAEPQILYPRAPRPSYADQVISLFRDHGLEPRIAHEARELQIA 230 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 + + A + L A P ++ H + L ++ H+ N + Sbjct: 231 IGLVAAEEGL--AIIPESISR-SRSHDVVYRELAEAATSPI---------IMSHRMNDSS 278 Query: 302 PKIVWLRETIKNLYAS 317 ++ + + I + YA+ Sbjct: 279 AELRLMAQVIASEYAA 294 >UniRef50_D0Z9H4 Transcriptional regulator, LysR family n=40 Tax=cellular organisms RepID=D0Z9H4_EDWTE Length = 302 Score = 219 bits (560), Expect = 8e-56, Method: Composition-based stats. Identities = 44/313 (14%), Positives = 104/313 (33%), Gaps = 22/313 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 + + L + + +A+ R+N++ A+S ++ L LFV + + TP Sbjct: 3 MSIKQLRAFLAVAHTLNFAQASVRLNLSQPALSLAIRSLEDALGGALFVRTTRQVRLTPE 62 Query: 68 MVSMEQNLAEWMQMSNLLLDKPH-HQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + + + + + T + K +AA L + ++ +RY Sbjct: 63 GEAFFPLVRQLLVDWDNTTETIRQRFTLQVGKVAIAAMPSFAANPLPFILQRFRRRYAGV 122 Query: 127 TIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + + + + + I G V++G + + + L + + Sbjct: 123 NVVVHDVINEAVYEMIAEGRVEMGIAFEPEPGA----------RLHFTPLGMNRFIAIVP 172 Query: 186 KDHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 P Q L I++ S L+ L + G++ +A + M Sbjct: 173 PGCPFARQQDIGWRQLLSLDFITLQRPSSMRLLLEQRLAQNGKQLPVAFESHQLITVGNM 232 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 A + L ++ P +C + + L + +E F L+ + + Sbjct: 233 VA--NGLGVSAVPAWCARQMRQLGAVCLPL-------IEPVIENRFGLVSLMHHPFSCAA 283 Query: 305 VWLRETIKNLYAS 317 + +TI + Sbjct: 284 QAMADTICEYAQA 296 >UniRef50_Q1GEX3 Transcriptional regulator, LysR family n=1 Tax=Ruegeria sp. TM1040 RepID=Q1GEX3_SILST Length = 306 Score = 219 bits (560), Expect = 9e-56, Method: Composition-based stats. Identities = 46/314 (14%), Positives = 103/314 (32%), Gaps = 26/314 (8%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 + L L L +L + +AA+++ ++ ++S +A L PL GL Sbjct: 1 MPELSLRHLRYFAVLSRALQFRRAARQLGISQPSLSLQIAALEEIVGAPLLERRRNGLIL 60 Query: 65 TPLMVSMEQNLAEWMQMSNLLLDK-PHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRY 123 T + + LL++ + L + + +L + K++++ Y Sbjct: 61 TAAGRDVAARAERILADCELLVNASATRRAGLSGTLRLGSSPTIGPYILPQVLKRLHETY 120 Query: 124 PQATIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCV 182 P + +R+ D L+ + G+ D+ + I + LF + + Sbjct: 121 PDFRLIIRDGPSRDLLEDLVAGKHDLILTQAPIQR----------DDIRFHPLFREPLYL 170 Query: 183 WLRKDHPALHQTW-NLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQS 241 + + HP + +S+ + ++ + Q +G + + Sbjct: 171 VVPRGHPLATAGVARRRDLGQEQFLSLNPAYALRRQVEGLAQTVGARMQDDIDGTSLDAI 230 Query: 242 LFMAAQPDNLLLATAPRYCQYYN---QLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRN 298 M A + + P+ + + +V L + LE L W + Sbjct: 231 RQMVA--LGMGVTLMPQSYTRSEIDNRKDDVCVVTL--------KPGLERHIGLAWRVSS 280 Query: 299 SHNPKIVWLRETIK 312 + L E I Sbjct: 281 GNPASFEELAEAIA 294 >UniRef50_C6VMS1 Transcription regulator n=11 Tax=Firmicutes RepID=C6VMS1_LACPJ Length = 301 Score = 219 bits (560), Expect = 9e-56, Method: Composition-based stats. Identities = 43/318 (13%), Positives = 108/318 (33%), Gaps = 27/318 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L+ L L + + T+ AK +++T +++K++ L A + LF + ++ TP Sbjct: 1 MNLDHLRYFVALSRTENYTQTAKLLHITQPSLTKAIHSLEAELNIDLFQKAGRSVTLTPA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQAT 127 ++ + + + + + +AA L + L ++++ Q P A Sbjct: 61 GKVFASDVESALLLLDKSVTNIKRFDQQKAPIRIAALRTLSIKWLPDIAQRFLQLSPHAA 120 Query: 128 IKLR-----NWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCV 182 ++ + D L+ + + D+ F + H I++ + Sbjct: 121 VQFQFNTDTGLSPDILNGLRNNKYDVAFCSKMDHFS----------DIEFFPVAEQTMVC 170 Query: 183 WLRKDHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQS 241 HP + NL L YP I+ + + + G + A ++ E + Sbjct: 171 ITPTTHPLANRSSINLAETLAYPQITFSQRSGLHPIMQKLFNDCGGQPISAYAVEEDQAI 230 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 + A + + Q P+ + + K + Sbjct: 231 AGLVASGFGIAVVPNMSILQTM-----------PVKIIPLSFPTWQRILYMGTLKHRTPQ 279 Query: 302 PKIVWLRETIKNLYASMA 319 P + +++ +++ Sbjct: 280 PAVEEFITFVRDQSKTLS 297 >UniRef50_B2SBJ3 ALS operon regulatory protein n=36 Tax=Proteobacteria RepID=B2SBJ3_BRUA1 Length = 299 Score = 219 bits (560), Expect = 9e-56, Method: Composition-based stats. Identities = 43/310 (13%), Positives = 92/310 (29%), Gaps = 26/310 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L + +E + T+AA ++ + +S+ + L LF P G T Sbjct: 5 MELRHLRYFLAVAEEGNFTRAAAKLGIGQPPLSQQIRDLENEIGVMLFHRVPHGAELTAA 64 Query: 68 MVSMEQNLAEWMQMSNLL-LDKPHHQTPRGLKFELAAESPLM-MIMLNALSKQIYQRYPQ 125 + + + S L + L + +++ + ++P+ Sbjct: 65 GAAFLEEATATIASSEKAKLAAQRAARGESGRLSLGFTASSAFNPIVSGAIRHFRAKWPE 124 Query: 126 ATIKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 + L + + L + + RGE+D F P + + L + V L Sbjct: 125 VELFLTEMNTNLLIERLVRGELDTAFIRPGLED---------PANVRMKRLADEPMLVAL 175 Query: 185 RKDHPALH-QTWNLDTFLRYPHISICW--EQSDTWALDNVLQELGRERTIAMSLPEFEQS 241 H + L P + S + + G E + P+ Sbjct: 176 PSHHRLAVYERLPLSALAGEPFVLFPRIVGLSLYDDIAAACRMAGFEMNVTQEAPQMPSV 235 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 + + A L ++ P + + + + L L K + Sbjct: 236 VNLVAAN--LGVSIVPAAIAQIRLDG--------VTYRPIEGEPLVARLALASMKS-LRS 284 Query: 302 PKIVWLRETI 311 P L + Sbjct: 285 PVHDNLISLL 294 >UniRef50_C1XNG0 Transcriptional regulator, COG0583 n=2 Tax=Meiothermus RepID=C1XNG0_MEIRU Length = 312 Score = 219 bits (560), Expect = 1e-55, Method: Composition-based stats. Identities = 45/313 (14%), Positives = 95/313 (30%), Gaps = 21/313 (6%) Query: 7 TLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTP 66 + L L+ + + S++KA +NVT S V++++ KL LF G+ T Sbjct: 2 QISLKQLVYFIAVAESGSISKALTSLNVTQSVVTEAIKKLEETLGAELFTRHARGMILTH 61 Query: 67 LMVSMEQNLAEWMQMSNLLLDKPHH-QTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQ 125 ++ E + + L S + L L + + +P Sbjct: 62 AGHQFLRHAHEVLAALRNAEQAIRERPDATTGQLNLGVTSLVTAYYLPYLLDRFERVFPG 121 Query: 126 ATIKLRNWDYDSLDAIT-RGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 + + ++ + GE+D+ + A++ L VWL Sbjct: 122 VQVAVVEDRRGYIEHLLINGELDVAVM---------NVSMVDKQALETRTLLRAPWRVWL 172 Query: 185 RKDHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 +HP + Q +L+ + + G +A+ E Sbjct: 173 PTNHPLVQQEAVSLENLREERF-LYLKNDELEEVTQQIYRLSGF-PRVAVRTDSIEAMRS 230 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 + A + +A P L L + PL + + + W + ++ + Sbjct: 231 LVA--LGIGVAVLPNLMYRPWSLEGDRLESRPL-----LENLPRLEIGVAWRRGSALSEA 283 Query: 304 IVWLRETIKNLYA 316 + Sbjct: 284 ARQFLVVVGEHSR 296 >UniRef50_A4YQI9 Transcriptional regulator of protochatechuate degradation (LysR family) n=14 Tax=Proteobacteria RepID=A4YQI9_BRASO Length = 316 Score = 219 bits (559), Expect = 1e-55, Method: Composition-based stats. Identities = 37/317 (11%), Positives = 87/317 (27%), Gaps = 22/317 (6%) Query: 6 TTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPT 65 ++++L L + + S +KAA ++V A+S+ + L + LF + G+ T Sbjct: 16 SSMNLKQLEYFVQVAELGSFSKAASVLDVAQPALSRQVRALESELKQQLFARNGRGVELT 75 Query: 66 PLMVSMEQNLAEWMQMSNLLLDKP-HHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYP 124 + + +Q+ + + + + + + L + + YP Sbjct: 76 EAGKRLLDHSVGVLQLVAHAREDLGASRDAPVGRVTIGLPPSIARQLTLPLIDRFRKEYP 135 Query: 125 QATIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVW 183 A + + ++ +T G +D+G I+ + + + Sbjct: 136 AARLAVVEGLSTHVVEWVTTGRIDVGMVYNPEAQA----------GIEITPVLQEPLALV 185 Query: 184 --LRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQS 241 K + + RY I + L+ G IA + Sbjct: 186 SHAPKGKRRVTAPLPMTELSRYSLIMPERVHAMRRLLETQAALAGIRLDIAWEVSSVPSI 245 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 + + + T A L + + Sbjct: 246 IDLVCAGYGHAVLTPSGVAASG--------RASELTIRPLTEPAPTSVLCFVTSAHKRPT 297 Query: 302 PKIVWLRETIKNLYASM 318 P + L + Sbjct: 298 PLAQQTIKLATALIRKL 314 >UniRef50_P77744 HTH-type transcriptional regulator abgR n=48 Tax=Enterobacteriaceae RepID=ABGR_ECOLI Length = 302 Score = 219 bits (559), Expect = 1e-55, Method: Composition-based stats. Identities = 40/311 (12%), Positives = 108/311 (34%), Gaps = 19/311 (6%) Query: 7 TLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTP 66 + ++ + + ++ S+ A++ +N++ A+SKS+ +L LF G++ T Sbjct: 4 QVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTD 63 Query: 67 LMVSMEQNLAEWMQMSNLLLDKPHHQTP-RGLKFELAAESPLMMIMLNALSKQIYQRYPQ 125 S Q+ + ++ + + + + + + ++ A+ + +Q++PQ Sbjct: 64 AGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQ 123 Query: 126 ATIKLRNWD-YDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 +++ ++ + +GE+D + +E L ++ Sbjct: 124 VKVRIMEGQLVSMINELRQGELDFTI--------NTYYQGPYDHEFTFEKLLEKQFAIFC 175 Query: 185 RKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 R HPA+ ++ L Y S L +L + + + + F + + Sbjct: 176 RPGHPAIGAR-SIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISL 234 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 A+ D L L ++ + ++ + L+ + + P Sbjct: 235 VAKSDFLS-KLPEEMGCDPLHGQGLVMLPVSEILPKAA-------YYLIQRRDSRQTPLT 286 Query: 305 VWLRETIKNLY 315 L + Sbjct: 287 ASLITQFRREC 297 >UniRef50_Q1G7P1 Transcriptional regulator (LysR family) n=3 Tax=Lactobacillus delbrueckii subsp. bulgaricus RepID=Q1G7P1_LACDA Length = 304 Score = 219 bits (559), Expect = 1e-55, Method: Composition-based stats. Identities = 38/314 (12%), Positives = 87/314 (27%), Gaps = 25/314 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +++ L L + + K A+++ ++ ++S +++ + PLF + T Sbjct: 1 MNIRHLRFFVELAKTEHMAKTAEKLGISQPSLSYAISSIEEELGVPLFEKEGRNIRLTNY 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHH-QTPRGLKFELAAESPLMMIMLNALSKQIYQR--YP 124 + + + + + + + ++ L + Q Sbjct: 61 GKIYLEYVKSGLSDLDRGGEYIAELLDVNRGHIRVGF--TMGQDLIPQLIYKFKQEKDTK 118 Query: 125 QATIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVW 183 T D +D + +D+ S L L +D L Sbjct: 119 DITFSFVQGTTDDLVDQLVNDNLDLVVSPAPD-------LPGLEDKVDISHLVDQEMLAV 171 Query: 184 LRKDHPALHQ-TWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 + +P + + +L +YP I LD + E + I M E + Sbjct: 172 VPFSNPLAQKDSVSLADLAKYPMIYYSKSSRLRPLLDKMFAEAVVKPKIIMESMEDHTII 231 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 +A P L + + P ++ + P Sbjct: 232 GFVH--WGYGVAIVPHL---------PQLDPRTVKLLHIDENLGVHPIFVVKKSDHFLTP 280 Query: 303 KIVWLRETIKNLYA 316 + IK+ Sbjct: 281 AVTRFERFIKSYCR 294 >UniRef50_C8WV81 Transcriptional regulator, LysR family n=2 Tax=Alicyclobacillus acidocaldarius RepID=C8WV81_ALIAD Length = 305 Score = 219 bits (559), Expect = 1e-55, Method: Composition-based stats. Identities = 37/312 (11%), Positives = 88/312 (28%), Gaps = 20/312 (6%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 + +DL L +++E S T+AA++++++ A+S+ + L L L Sbjct: 1 MKRVDL-QLRVFVTVVEENSFTRAAEKLHISQPAISQHVQTLEQRLGVRLIDRGRRRLQV 59 Query: 65 TPLMVSMEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQIYQRY 123 P + ++ E + + + + A +L + + + Y Sbjct: 60 NPAGRIVYEHAKEILALYRRMERLIADMQEMPAGPVHVGASLTYGEYVLPHVIARFRKAY 119 Query: 124 PQATIKLRNWDYDSLD-AITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCV 182 P + + ++ A+ ++DIG + + D V Sbjct: 120 PAVQPSVSIANTQTIAHAVAVRQLDIGIVEG---------QDVVEDEVVLTPFAEDEMLV 170 Query: 183 WLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 P + + R D + +LG + + + Sbjct: 171 VASPASPWYAEAPDRSLLERATWFIREPGSGTREMTDRLFTQLGIQPRDLVEYTSSQVIK 230 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 A L + L + +P ++ F+++ K Sbjct: 231 ESVAAGLGLA-CLSRWVVARELAWGMLRTLPIPCA-------PVKRTFSIVTPKSAFETK 282 Query: 303 KIVWLRETIKNL 314 L + Sbjct: 283 ASKLLYSFLMEH 294 >UniRef50_C9KMN5 Transcriptional regulator, LysR family n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KMN5_9FIRM Length = 310 Score = 219 bits (559), Expect = 1e-55, Method: Composition-based stats. Identities = 45/326 (13%), Positives = 106/326 (32%), Gaps = 39/326 (11%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +++ ++ + + S+++AA+++ ++ ++S+ L + PLF L PT + Sbjct: 1 MEIRHFHYIRTIYETGSISRAAEKLYISQPSLSQLLKSVEKKVGAPLFDRGSQPLRPTTI 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTP-RGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + M++ + + + L + + ++YP Sbjct: 61 GQKYLETAQRIMELDTEFHRYVEDELGCAQGNLVVGSSPFRSTYFLASFLPEFQEKYPGI 120 Query: 127 TIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 ++L +A+ G+ D+ + + + + L+S+ + L Sbjct: 121 RLQLAEHTSKRLEEAVLSGDADLIIATQPVDANA----------FSFAELYSEEMVLVLP 170 Query: 186 KDHPALHQ--------------TWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTI 231 H Q L P I + EQ L ++ +E G I Sbjct: 171 AGHELSKQYHLPQDCRGTLPLLPIGL--LKDTPFIQMHSEQKLHQQLLSLCEEAGFTPKI 228 Query: 232 AMSLPEFEQSLFMAAQPDNLLLATAP-RYCQYYNQLHQLPLVALPLPFDESQQKKLEVPF 290 + E +L +AA L P + + + ALP + Sbjct: 229 YLQTRSMETALTLAAA--GLGATLLPMTLLRAFQPKTRPCYAALP--------TRPRRHA 278 Query: 291 TLLWHKRNSHNPKIVWLRETIKNLYA 316 + W K++ + +++ N Sbjct: 279 LVAWRKKSYLSHAARAFIDSLVNYCR 304 >UniRef50_D1P3H6 Transcriptional regulator, LysR family n=1 Tax=Providencia rustigianii DSM 4541 RepID=D1P3H6_9ENTR Length = 303 Score = 219 bits (559), Expect = 1e-55, Method: Composition-based stats. Identities = 74/319 (23%), Positives = 131/319 (41%), Gaps = 30/319 (9%) Query: 3 KS-ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLG 61 + IT +DL L + L++ER+VT+AA ++ +T AVS L+KLR F D LF+ S G Sbjct: 1 MNGITRIDLKQLRVFKALLKERNVTRAAAQMGLTQQAVSAQLSKLRDTFQDHLFLRSAQG 60 Query: 62 LSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQI 119 L PTPL +E + + L P P F ++A + ++L L ++ Sbjct: 61 LIPTPLAEQLEPRVNTVFESI-AALSPPDRFDPAEVYTTFVISATDYAVAVILPRLMAKV 119 Query: 120 YQRYPQATIKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSD 178 + P + +R+++ D +T G++D+ + + +P + LFS+ Sbjct: 120 RTQAPGLKLIIRDFESDRLYPLLTSGDLDLALTFP----------AFVPDGCQTKWLFSE 169 Query: 179 VPCVWLRKDHPALHQTWNLDTFLRYPHISICW-EQSDTWALDNVLQELGRERTIAMSLPE 237 R D P +Q + + P I + + + D+ G R I MS+P Sbjct: 170 HHICVTRSDSPMQNQQFTISDIADLPQIIVSPTRANLIGSADDWFASKGYSRNIVMSVPS 229 Query: 238 FEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFD-ESQQKKLEVPFTLLWHK 296 F + A D +A P ++ PL + WH Sbjct: 230 FAAAPACIASTDC--IAFLPS-----------RILPNPLVRPIQLDDSPPSFDVIAAWHL 276 Query: 297 RNSHNPKIVWLRETIKNLY 315 R++ +P W+ ++ + Sbjct: 277 RSNQDPLHKWILSLLQQEF 295 >UniRef50_C4DFU1 Transcriptional regulator, COG0583 n=1 Tax=Stackebrandtia nassauensis DSM 44728 RepID=C4DFU1_9ACTO Length = 309 Score = 219 bits (559), Expect = 1e-55, Method: Composition-based stats. Identities = 48/306 (15%), Positives = 95/306 (31%), Gaps = 21/306 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 D N L + +E SVT AA +++ +VS LA+L PL G+ T Sbjct: 2 FDENRLRVFVAVAREGSVTAAAAKLHYAQPSVSHHLARLEEEIGAPLVSRLGRGIRLTEA 61 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + E + + + LAA + ++ + + YP Sbjct: 62 GRLFAERAEEILGRIDAARTELASHAGLVNGHVRLAAFPTALAALVPSAAGAFADAYPGV 121 Query: 127 TIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + L ++ A+ RGEVDI + + + + LF + + Sbjct: 122 DVDLTEAEPPQAIAALRRGEVDICLAFHYGATPPADWEA-----LSVAPLFDEPVYLVTS 176 Query: 186 KDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMA 245 L ++ I+ C + L + + G ++A ++ + Sbjct: 177 PGSSPSGPRDELASYADRRWIAGCAQC--RAHLLSACEASGFTPSVAFETDDYVAVQALV 234 Query: 246 AQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIV 305 AQ + ++T P ++ ++ L LP P Sbjct: 235 AQ--GMGVSTLPGLALRAHRDERVRLDLLPDDRRTVVALTYGAPVA----------APAR 282 Query: 306 WLRETI 311 + + Sbjct: 283 AFLDIL 288 >UniRef50_Q13GE5 Transcriptional regulator, LysR family n=1 Tax=Burkholderia xenovorans LB400 RepID=Q13GE5_BURXL Length = 303 Score = 219 bits (559), Expect = 1e-55, Method: Composition-based stats. Identities = 41/309 (13%), Positives = 107/309 (34%), Gaps = 23/309 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +LN ++ + + S +AA+ + + SAVS +++L LF + ++ T Sbjct: 5 FNLNNVITFLAVAETLSFRRAAEHTHTSQSAVSARVSQLEDRLGVRLFHRTTRQVTLTAE 64 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + ++ + + + + +AA + +L + + ++RYP Sbjct: 65 GLQLFVVARTAVEDMERVAESLRKKAALQSGELTIAAVPSIGQTVLPTIMGEFHRRYPGV 124 Query: 127 TIKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 T+KL + D ++ + G VD+ I +E LF D + + Sbjct: 125 TLKLLDVDSQRCIEMMEAGSVDLAIVSDLEDR----------HDIVFEPLFRDECFLVVP 174 Query: 186 KDHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 + H ++ +L +P ++ + ++ G + + Sbjct: 175 RTHALGERRSISLREAASFPLMASPRGTTLWQIIERAFAACGATPVAHQETWNMSTLVRL 234 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 + + + P C + + +++L ++ + + S +P Sbjct: 235 VEEGFGMGI--VPEICLGKLDVSRCTVLSL--------EEHVGRMIGVARMTNRSESPGS 284 Query: 305 VWLRETIKN 313 R+ + Sbjct: 285 KAFRQLLGE 293 >UniRef50_B6J4H7 Hydrogen peroxide-inducible gene activator n=7 Tax=Coxiella burnetii RepID=B6J4H7_COXB1 Length = 313 Score = 219 bits (559), Expect = 1e-55, Method: Composition-based stats. Identities = 43/297 (14%), Positives = 81/297 (27%), Gaps = 33/297 (11%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +++ L L + KAA++ V+ +S L KL LF + + TP+ Sbjct: 1 MNIRDLKYLLAVADSAHFGKAAEKCFVSQPTLSAQLKKLEEELGVRLFERNNKRVLITPI 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPH-HQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + +Q L Q P F L L +L + + +R P+ Sbjct: 61 GQIIAAQVRVILQEVEKLKVLAQNAQDPFAGVFHLGIIPTLGPYLLPIILEIFKKRLPKL 120 Query: 127 TIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + + + L + +G +D + + LF + V L Sbjct: 121 NLVVYENKTENILHELQQGRLDAVILALPVSAP----------NLVVQELFCEPFYVALP 170 Query: 186 KDHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQ------ELGRERTIAMSLPEF 238 K HP ++ L + + + E G + Sbjct: 171 KHHPLAKKKSVTLADLEKETLLLLEEGHCLREQALEACSMTAAKTETGFKAK----ATSL 226 Query: 239 EQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWH 295 E + A + P + L +LW Sbjct: 227 ETLRHLVAA--GAGITLLPALSVNAEKSE--------LAIKSFNATIPSRSIGMLWR 273 >UniRef50_Q0BPL7 Transcriptional regulators, LysR family n=1 Tax=Granulibacter bethesdensis CGDNIH1 RepID=Q0BPL7_GRABC Length = 308 Score = 219 bits (559), Expect = 1e-55, Method: Composition-based stats. Identities = 74/320 (23%), Positives = 122/320 (38%), Gaps = 21/320 (6%) Query: 2 KKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLG 61 ++++ LDLNLL + ERSVTKAA+ I V SA+S +LA+LR D LFV +P G Sbjct: 5 HRNLSRLDLNLLTAFDAIYTERSVTKAAECIGVGQSAMSHNLARLREALQDELFVRTPSG 64 Query: 62 LSPTPLMVSMEQNLAEWMQMSNL--LLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQI 119 + PTP ++ + + L + + + + +++ L + Sbjct: 65 MEPTPRARAIADTVRNLLWTVQDKLLTTRSFTPATAERIWRIGLADNIESLLMPPLLDMM 124 Query: 120 YQRYPQATIK-LRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSD 178 + P I+ + L+A+ R E+D+G + + P D Sbjct: 125 LKEAPGMRIQAIFTDGLRVLEALDRDELDMGIGVFRHGGNVHKRRNFAP----------D 174 Query: 179 VPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEF 238 L LD + PH+ + D+ L LGR RTI M+ P F Sbjct: 175 SYLCLYDPKQITLEGPITLDQYASLPHVLVSLRGIFHGVADDALSLLGRTRTIVMTTPHF 234 Query: 239 EQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRN 298 + ++ + H L + LP ++LWH Sbjct: 235 LSVP-YVLRGAPVITTLPGTLARSAASAHGLCVSPLPFEL-------APFRLSMLWHSSY 286 Query: 299 SHNPKIVWLRETIKNLYASM 318 ++P WLR T+ +L M Sbjct: 287 DNDPAHRWLRNTVASLMDQM 306 >UniRef50_Q1LN85 Transcriptional regulator, LysR family n=1 Tax=Cupriavidus metallidurans CH34 RepID=Q1LN85_RALME Length = 307 Score = 219 bits (559), Expect = 1e-55, Method: Composition-based stats. Identities = 41/311 (13%), Positives = 85/311 (27%), Gaps = 22/311 (7%) Query: 7 TLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTP 66 + L + + + SV +AA+ +++T AVS + + LF + ++ T Sbjct: 2 QITFRQLRVVSEVARYSSVIRAAEALHLTAPAVSLQIKEAERQVGLTLFDRAGRRMTLTT 61 Query: 67 LMVSMEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNALSKQIYQRYPQ 125 + D + + L L + + +P Sbjct: 62 TGEYFLVYARRLLATLKDAEDMMARFKRLESGRLTIGMVG-AASYFLPQLLAKFHAEHPA 120 Query: 126 ATIKLRNWDYDSLDAITRG-EVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 ++LR + L + +G +VD+ GR E S + + Sbjct: 121 VDVRLRLASREKLGVMMQGNDVDLCIMGRPPQDPPT----------RAEPFASHPHVLVV 170 Query: 185 RKDHPALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 H + P I + AL L + T M +P E Sbjct: 171 SPQHRFARAEAVPAVALANEPFIVREPDSGTREALQKYLDAHRIQPTFVMEMPSNEAIKQ 230 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 + L + ++ + + LE + ++ +P Sbjct: 231 AVMAGMGVSLLSLHTIALEWSNGL--------IAVPHVEGLPLERRWNVVNIAAKQLSPA 282 Query: 304 IVWLRETIKNL 314 R + Sbjct: 283 AEAFRYFVLEH 293 >UniRef50_Q0BQN6 Hydrogen peroxide-inducible genes activator n=2 Tax=Acetobacteraceae RepID=Q0BQN6_GRABC Length = 317 Score = 219 bits (559), Expect = 1e-55, Method: Composition-based stats. Identities = 52/319 (16%), Positives = 98/319 (30%), Gaps = 26/319 (8%) Query: 2 KKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLG 61 ++ L L L + + R +AA++ V+ A+S+ + KL LF Sbjct: 3 PMNLAGLSLRDLEYAVAVSELRHFGRAAEQCGVSQPALSEQVRKLEDLLGVTLFDRGNRQ 62 Query: 62 LSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTP-RGLKFELAAESPLMMIMLNALSKQIY 120 + PT ++ +Q + LLL+ Q L L L ++ + + Sbjct: 63 VRPTEQGEAILSQARGILQQARLLLEMAQSQQGSLTGTLRLGVIPTLGPYYLPSVLRSVL 122 Query: 121 QRYPQATIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 R P ++++ D LDA+ G++DIG S I E + + Sbjct: 123 GRLPGLSLQIEELKTGDLLDALRVGKLDIGLLAWLSPM----------DGIVAEPILDEP 172 Query: 180 PCVWLRKDHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELG----RERTIAMS 234 + HP + NLD + + ++ G + + Sbjct: 173 FLLACPTGHPLAFRRDVNLDALPVDGLLLLEEGHCLRDQALSLCARQGSRTAHTQKQRFA 232 Query: 235 LPEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLW 294 E M A + + P + L PL L+W Sbjct: 233 C-SLEMLRHMIAAGEGY--SLLPALAARGREDLHGLLSLSPLT------DSAARRICLIW 283 Query: 295 HKRNSHNPKIVWLRETIKN 313 + L +++ Sbjct: 284 RGSDPRGDGYGRLAGLLRD 302 >UniRef50_B3EA60 Transcriptional regulator, LysR family n=2 Tax=Bacteria RepID=B3EA60_GEOLS Length = 302 Score = 219 bits (559), Expect = 1e-55, Method: Composition-based stats. Identities = 57/316 (18%), Positives = 106/316 (33%), Gaps = 25/316 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L + QE S ++AA+++ V A+S +A L PL + + + T Sbjct: 1 MELRHLRYFVNVAQELSFSRAAEKLLVAQPALSTQIADLEQEIGTPLLLRNTRSVQLTAA 60 Query: 68 MVSME-QNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + A + + + S M+ L L ++ YP Sbjct: 61 GKVFLIEAQAILAAADAAKDRALRTSRGQEGQLSIGFFSAPTMLFLPDLIRRYRAIYPNV 120 Query: 127 TIKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 I++ D L A +RGE+DIGF+ + EVLF + + Sbjct: 121 AIRMHELTPDRQLAAFSRGEIDIGFTRPLPPG---------YPDLAGEVLFQEHFLAVMA 171 Query: 186 KDHPA-LHQTWNLDTFLRYPHISICW--EQSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 + HP Q+ +L+ + P + + + + G ++ S L Sbjct: 172 ETHPLGSRQSIHLNELAQEPFVLLDRAVAVGLHDHIIAACLKAGFSPLVSTSPDLMSAVL 231 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 M A ++ P Q L F +P + WH + P Sbjct: 232 TMVAAEQG--VSIVPEGVQNLRSNQ--------LAFVPIIPALEPIPLIVCWHAKTDAPP 281 Query: 303 KIVWLRETIKNLYASM 318 + + I+ +A + Sbjct: 282 R-DAFLQLIREQHAQV 296 >UniRef50_C0ADM3 DNA-binding transcriptional regulator CynR n=2 Tax=Bacteria RepID=C0ADM3_9BACT Length = 328 Score = 218 bits (558), Expect = 1e-55, Method: Composition-based stats. Identities = 44/332 (13%), Positives = 99/332 (29%), Gaps = 38/332 (11%) Query: 6 TTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPT 65 +++ LL + + + S T+AA I + +S+ + +L PLF + T Sbjct: 7 DSVEFRHLLYFRAVAEAGSFTRAAAIIGLRQPTLSQQIKQLEDELGAPLFHRARRMCRLT 66 Query: 66 PLMVSMEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQIYQRYP 124 P + + L + +AA L ++ + + +P Sbjct: 67 PAGEMLLPYARRVLGEMENLRHSLDDLSGLRRGSLTVAALPVLSHRVMPLAVARFHAEHP 126 Query: 125 QATIKLRNWD-YDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVW 183 +++ D A+ +G V++G +S + ++LF + Sbjct: 127 DIRVRMLEMSVDDMEAALVQGTVEMGIGYMPPAGKS----------LRAQLLFQEELVAV 176 Query: 184 LRKDHPALHQT--------------------WNLDTFLRYPHISICWEQSDTWALDNVLQ 223 +R+D P +++ +R P I++ + N Sbjct: 177 VREDDPLAQGGGGGGGKAARGGRERGDTSRWVSMEALMRRPLIALPPGHGTRTMMLNAFA 236 Query: 224 ELGRERTIAMSLPEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQ 283 + R AM E L + + + P + ++L ++ Sbjct: 237 SVRRVARFAMEAGSVEVLLQVVRECGGPGI--VPSSALWGRTGNELA----GCAVLRVER 290 Query: 284 KKLEVPFTLLWHKRNSHNPKIVWLRETIKNLY 315 L L P ++ + Sbjct: 291 PGLRRQVGFLNLSGVHTRPAAEAFIPIVQAVV 322 >UniRef50_Q20XL9 Transcriptional regulator, LysR family n=1 Tax=Rhodopseudomonas palustris BisB18 RepID=Q20XL9_RHOPB Length = 297 Score = 218 bits (558), Expect = 1e-55, Method: Composition-based stats. Identities = 45/310 (14%), Positives = 101/310 (32%), Gaps = 26/310 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++ + L C + + T+AA+R++++ A+S + KL LF S + T Sbjct: 1 MESSQLRCFLEVAETLHFTRAAERLHLSQPALSTQIEKLERELGVDLFERSHKKTTLTYS 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + + + + +++ + + S ++ L ++ P Sbjct: 61 GTLYREEARKILALGSRAVERARQAAAGQIGRLRIGFISTAAAYVIPQLVSDFRKQAPNV 120 Query: 127 TIKLRN-WDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + LR+ ++ + GE+DIGF P + ++ + ++L Sbjct: 121 ELDLRHYLTAQQVNLLCGGELDIGFLRIPLRE---------PRGLSTILVHEEPYKLFLP 171 Query: 186 KDHPAL-HQTWNLDTFLRYPHISICW--EQSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 HP L ++ L V+ + G + + Sbjct: 172 ATHPLASQARLELQDLDGAEFVTYSKLNAPGFAETLATVMLQAGIRPAATHEASDMYSLI 231 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 + + + +A AP Q Y +L L + L Q L H+ +P Sbjct: 232 SLVSA--GVGIAIAPASLQNY-RLPNLVIRDL--------QGIRPSEVALA-HRDGIDHP 279 Query: 303 KIVWLRETIK 312 + + Sbjct: 280 AALAFIRAAR 289 >UniRef50_B9Z0M9 Transcriptional regulator, LysR family n=2 Tax=Betaproteobacteria RepID=B9Z0M9_9NEIS Length = 316 Score = 218 bits (558), Expect = 1e-55, Method: Composition-based stats. Identities = 37/312 (11%), Positives = 84/312 (26%), Gaps = 21/312 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +D+ L L + + SVT+AA+ ++V AVS+ L L LF G+ T Sbjct: 1 MDIKQLRALIAVAETGSVTRAAEMLHVVQPAVSRQLRLLEEDIGAALFERGRYGMELTEQ 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPH-HQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + ++ + + + ++ + L + YP Sbjct: 61 GEILAEYTRRALRELDRARAEIQPTSATIQGIVTIGLLPSTADLLASPLLTTVSSLYPGV 120 Query: 127 TIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 +++ + + GEVD ++ L + V Sbjct: 121 RLRISIGFAGHLQNWLESGEVDAALLYDPKPSPM----------LNVSPLLEENLWVVGP 170 Query: 186 KDHPALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 + +L P I + +++ +E + + + Sbjct: 171 ASSNFAAERPVSLAELAGVPLILPSAPHALRTLVEHAFALAKQEVKVVVETNAMSVQRNL 230 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 L P + L L +L+ L + Sbjct: 231 VLAGHGL--TILPSIAVADDIARGL------LKAAPLTSPELQRKIVLALPNTRRVTLAV 282 Query: 305 VWLRETIKNLYA 316 + + + + Sbjct: 283 SCVVKALTSEIK 294 >UniRef50_B2JTF3 Transcriptional regulator, LysR family n=1 Tax=Burkholderia phymatum STM815 RepID=B2JTF3_BURP8 Length = 309 Score = 218 bits (558), Expect = 1e-55, Method: Composition-based stats. Identities = 55/318 (17%), Positives = 105/318 (33%), Gaps = 22/318 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L +E +AA R+++T AVS+ +A L PLF + T Sbjct: 1 MELRHLRYFIAAAEEEHFGRAAVRLHITRPAVSQIIADLEGELGTPLFERLAHTVKLTAA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQ-TPRGLKFELAA-ESPLMMIMLNALSKQIYQRYPQ 125 ++ L M N + + LM + A K YP+ Sbjct: 61 GRTLLPQLVRVMDDLNEAIILTKRVGQGMTGTLRIGYGSLTLMHSIFKAAVKLFRATYPE 120 Query: 126 ATIKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLA-----IDYEVLFSDV 179 + L A+ G++D GF P + + + + +D + + Sbjct: 121 INLSLVELSTSLQPKALAEGKIDAGFMHLGPSPHPGKRRTEINMEREGIVLDSICIQTGS 180 Query: 180 PCVWLRKDHPALHQ-TWNLDTFLRYPHISICWEQS--DTWALDNVLQELGRERTIAMSLP 236 V + DH + + L+ P + S L ++ Q G E I + Sbjct: 181 VGVAVPNDHRFARRKSLTLEDLADEPLVVDPKSSSSLSYGQLYSLCQAAGFEPNIVQEVS 240 Query: 237 EFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHK 296 L + + + LA + + L ++ L + F + Sbjct: 241 TIASQLNLISVGMGIGLAV---MGKNFQYPSDLTVIPL-----ANLNYSTRFIFGWV--- 289 Query: 297 RNSHNPKIVWLRETIKNL 314 R ++P + + E +K+L Sbjct: 290 RRQNDPILENMIEIVKSL 307 >UniRef50_C0CW97 Putative uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0CW97_9CLOT Length = 300 Score = 218 bits (558), Expect = 1e-55, Method: Composition-based stats. Identities = 42/317 (13%), Positives = 104/317 (32%), Gaps = 31/317 (9%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 + L + + E S +KAA +++V+ A+S+ + +L LFV ++ TP Sbjct: 1 MQLRDIHYVLAAADEGSFSKAAVKVHVSQPALSQLIQRLEDELGVKLFVRKSNRVTLTPA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 ++ + +S+ L+ K + + ++ L + + +R+ Sbjct: 61 GKIFYEDGKVILALSDQLIHKMNDFQSLKKGELTISVSPFYQKCYLLGVLSEFQKRHFGI 120 Query: 127 TIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 +++ + DS + +G+VD+ F +S I YE +F + + + Sbjct: 121 KVRIVDAFSSDSETLLVQGQVDLAFVMLPYQNKS----------IKYERVFEERIFLAVP 170 Query: 186 KDHPALH-------QTWNLDT---FLRYPHISICWEQSDTWALDNVLQELGRERTIAMSL 235 + + ++ P + + + + + G E +A Sbjct: 171 RQFAINRKLPDPEERPCTIEDLKVLKDEPFVMYEHGRRMWGSSIALCRSAGFEPRVAFES 230 Query: 236 PEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWH 295 E M A + P + + + + T+ + Sbjct: 231 NVCESLNAMVAGGMGVG--FVPSAIDRVKARYDSVI------YYPIDDENAVRTLTIGYM 282 Query: 296 KRNSHNPKIVWLRETIK 312 ++N + +K Sbjct: 283 EKNMTS-AAREFVRVVK 298 >UniRef50_Q72A86 Transcriptional regulator, LysR family n=3 Tax=Desulfovibrio vulgaris RepID=Q72A86_DESVH Length = 300 Score = 218 bits (558), Expect = 1e-55, Method: Composition-based stats. Identities = 45/310 (14%), Positives = 94/310 (30%), Gaps = 24/310 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L +L C +++ + AA+ + T S VSK++ L + PL S G++ T Sbjct: 1 MNLRVLRCFVEVVRNGGFSAAARVVCATQSTVSKAVRSLEDEYGTPLLDRS-NGVALTAA 59 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNALSKQIYQRYPQA 126 ++ + + L + Q + + RYP Sbjct: 60 GETVYRRALAILAEKEALDAELGAQQSLQHGTLRFGVPPVACDRLFARPLSAFHARYPGI 119 Query: 127 TIKLRNWD-YDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 ++L Y + + RGE+++ + + L + L Sbjct: 120 RMELHEAGCYALEEMVLRGELEMVLALLPV-----------SERFETAPLCDEPLIAVLP 168 Query: 186 KDHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 + HP + L+ P I + + + G + + + + Sbjct: 169 EGHPLSGRPCIRLEDLDGSPFIQFEQGFALNPRIRDACLRRGVSLRETLCSSQMAFIISL 228 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 A L +A PR + L L L W K ++ +P Sbjct: 229 VAA--GLGVALIPRLMLAEGTPAGVVTAHLD-------ADDLRWQGALAWRKGHALSPPA 279 Query: 305 VWLRETIKNL 314 + + + Sbjct: 280 RAWLDIMAEM 289 >UniRef50_D1PPF0 Transcriptional regulator, LysR family n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PPF0_9FIRM Length = 292 Score = 218 bits (558), Expect = 1e-55, Method: Composition-based stats. Identities = 47/309 (15%), Positives = 96/309 (31%), Gaps = 21/309 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 + + L + Q + T AA+ +++T AV++++ +L ++ LF LSPT Sbjct: 1 MTIRHLRIFVAVYQAENATHAAEELHMTQPAVTRAIQELEQYYGTRLFERMYRHLSPTEC 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQAT 127 + + + + + + A L +L L+ + Q P Sbjct: 61 ARRLYPQAVHLLDSFDRIETGLRNWDSM-GIVRVGATVTLGSTVLPGLAHRFAQENPGIQ 119 Query: 128 IKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRK 186 +++ + +L A+ +D+ + E + +D+ C + Sbjct: 120 LQVTVANGGTLTAALCENRLDLALLESTPSLP----------DLHTEEIGTDLLCAVMTP 169 Query: 187 DHPA-LHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMA 245 P QT L+ P + + AL + L+ G I E L Sbjct: 170 ADPLAAGQTVTLEQLSAAPLLVREEGSTARAALQSALEAQGLPLHIVWESVSTEALLQ-- 227 Query: 246 AQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIV 305 A + L +A P + + L WHK + + Sbjct: 228 AAAEGLGVAVLPEPRVKNAAAAGIVC------TRPIDGQALRRHRVAAWHKEKYLSESMQ 281 Query: 306 WLRETIKNL 314 + Sbjct: 282 RFLALCRRT 290 >UniRef50_B5WW96 Transcriptional regulator, LysR family n=2 Tax=Burkholderia RepID=B5WW96_9BURK Length = 334 Score = 218 bits (558), Expect = 1e-55, Method: Composition-based stats. Identities = 41/314 (13%), Positives = 86/314 (27%), Gaps = 22/314 (7%) Query: 6 TTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPT 65 TL L L + + S +AA+ +++T AVS + +L LF L+ T Sbjct: 17 RTLTLRQLQIFIVASRYTSFARAAEELHLTQPAVSMQIHQLEEAVGLRLFERVARKLTLT 76 Query: 66 PLMVSMEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQIYQRYP 124 + + + + D + S L YP Sbjct: 77 EAGEVLTHHASRILGEIKDTEDAMMSLKSADSGSITVGIVSS-ATYFAPKLLAMYSHLYP 135 Query: 125 QATIKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVW 183 + + + D L + +D+ GR E L S V Sbjct: 136 RVDVNFSVGNRDALLRLLQDNAIDLAIMGRPPPELDT----------TAEPLASHPQVVI 185 Query: 184 LRKDHPALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 HP + ++L + A + + ++ ++L E Sbjct: 186 APLSHPLCGARRFDLQELCNDIFLLREPGSGTRMAAEAMFRQHLFTPAKTVTLGSNETIK 245 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 + ++ + + + +E + ++ + +P Sbjct: 246 QAVMA--GMGVSLISLHTLQLELRTG------EIALLDVNGTPIERTWQIVHLRSKQLSP 297 Query: 303 KIVWLRETIKNLYA 316 V R+ + A Sbjct: 298 TSVMFRQFLLEHAA 311 >UniRef50_A5ZQM8 Putative uncharacterized protein n=1 Tax=Ruminococcus obeum ATCC 29174 RepID=A5ZQM8_9FIRM Length = 313 Score = 218 bits (558), Expect = 2e-55, Method: Composition-based stats. Identities = 38/318 (11%), Positives = 100/318 (31%), Gaps = 24/318 (7%) Query: 1 MKKSITT---LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVN 57 MK + + L + S++ AA+ + ++ VS+++ +L ++ LF Sbjct: 1 MKNDWNRRGKMTIRHLNIFVAVADYGSMSAAARHLYLSQPTVSQAIRELEKHYNGLLFER 60 Query: 58 SPLGLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSK 117 L T + E ++ + + + L +L + + + L Sbjct: 61 LGKKLYLTERGELLLPRARELVRQFEETEELILN-QGQSLTLKLGSTITVGTCLTPRLIP 119 Query: 118 QIYQRYPQATIKLRNWDYDSLDA-ITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLF 176 ++ + P + + +++ + R E+D+G E + + Sbjct: 120 ELQKSCPDVKVSSYVSNTRAIEQKLLRSELDVGIVEGEI----------YSPDLHVLPIV 169 Query: 177 SDVPCVWLRKDHPA-LHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSL 235 D + + K+HP L + ++ + ++ Sbjct: 170 DDRLVLAVGKEHPFYLKKVLHVQDLEQEQFAMREQGSGTRQLFEDYATRHQISFQTVWEA 229 Query: 236 PEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWH 295 L D +L + R + + + + +++ + F L++H Sbjct: 230 NSPGTLLNAVL-YDGVLSVMSLRLMYHEIRNDSIHVF-------QNENGEWNRKFKLVYH 281 Query: 296 KRNSHNPKIVWLRETIKN 313 K P + L + + Sbjct: 282 KNKFLTPAVHELERILHS 299 >UniRef50_A9GLW1 Transcriptional regulator, LysR family n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9GLW1_SORC5 Length = 315 Score = 218 bits (558), Expect = 2e-55, Method: Composition-based stats. Identities = 70/297 (23%), Positives = 124/297 (41%), Gaps = 20/297 (6%) Query: 22 ERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSMEQNLAEWMQM 81 E SVT+AA R+ ++ SA+S +L +LR DDP+ V +P G+ PTP + + E + Sbjct: 35 EGSVTRAAARVGLSQSAMSHALGRLRVLIDDPVLVRTPRGMIPTPRAQELIGPIREALAK 94 Query: 82 SNL--LLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQATIKLRNWDYDSLD 139 F +A + +I+L L +++ P + R +D + Sbjct: 95 IEATVARSPRFEPATARRSFTVATVDYVELILLPRLVQKLVSEAPFIDLVARPYDSEMWS 154 Query: 140 AITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPALHQTWNLDT 199 A+ G+VD+ +LP + L + +R+ HPA+ L T Sbjct: 155 AMETGKVDLAIGLLP----------ALPAGFYRQRLIEERYMCVVRRSHPAVRGKLTLKT 204 Query: 200 FLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQPDNLLLATAPRY 259 + PH I +D VL E G R +A+ +P F + + AQ D + L R Sbjct: 205 YTSLPHALISPRGEGGGRVDEVLAERGLSRRVALQIPHFLVAAHIVAQTDLV-LTVPARI 263 Query: 260 CQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWLRETIKNLYA 316 + + ++ +L ++ P+ +WH+R++ +P WLR + Sbjct: 264 ARVFAEMEELHVMKPPVEL-------GGFSVDQVWHERHAKDPAHTWLRGVFAEIAR 313 >UniRef50_Q5FRA7 Putative transcriptional regulator n=1 Tax=Gluconobacter oxydans RepID=Q5FRA7_GLUOX Length = 308 Score = 218 bits (558), Expect = 2e-55, Method: Composition-based stats. Identities = 45/298 (15%), Positives = 100/298 (33%), Gaps = 27/298 (9%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L + + +ER++T+AA+R+ + +++ L + LF G+ TP Sbjct: 2 IELRHLHAVIAIAEERNLTRAAERLGIQQPPLTRLLKGMEQELGVQLFERHARGMRLTPA 61 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQ-TPRGLKFELAAESPLMMIM-LNALSKQIYQRYPQ 125 SM + + ++ + ++ + + + + L + Q + +P Sbjct: 62 GRSMLKGAYDVIERMDETVEDVRRIVRGEAGELSIGFTNSALCHPSLPDMLGQFRETWPD 121 Query: 126 ATIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 + L L A+ VD+ F S + E++ + V + Sbjct: 122 VGLTLTEGNSSQLLGALREDTVDVAFVRTSIPYVS---------DVVVELIVEEPMVVAV 172 Query: 185 RKDHPALHQT----WNLDTFLRYPHISICW--EQSDTWALDNVLQELGRERTIAMSLPEF 238 + H + L I + + G I P+ Sbjct: 173 PRTHRLAKEAPAGGLKLAELEDEDFILYQSQYNNGLYKTIVDACLGAGFTPRIRQKGPQL 232 Query: 239 EQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHK 296 +L + A L ++ P+ Q ++ +V +PL + L P L++ Sbjct: 233 LAALNLVAG--GLGISLVPQSMQQHHAG---QVVYIPLS----SRTALTAPLYLVFRS 281 >UniRef50_A8V9B9 LysR-like regulatory protein n=2 Tax=Betaproteobacteria RepID=A8V9B9_9BURK Length = 308 Score = 218 bits (558), Expect = 2e-55, Method: Composition-based stats. Identities = 58/313 (18%), Positives = 120/313 (38%), Gaps = 20/313 (6%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 + +D+ LL + SVT+AA+ + ++ +S +L+KLR + DPLFV + G+ Sbjct: 1 MIEIDVKLLNVFAETYRTSSVTQAAENLGLSQPTISFNLSKLRDHYKDPLFVRTSRGMEA 60 Query: 65 TPLMVSMEQNLAEWMQMSNLL--LDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQR 122 TP + + + + + + + L + F +A +++L L ++ Sbjct: 61 TPFAQELYEQVVDLLASFSNIARLQTSFDPSEAQRIFRIAMTDISQIVLLPTLLNKLRIV 120 Query: 123 YPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCV 182 P+A +++ + ++ + GEV++ L + LF V Sbjct: 121 APRAQLRISHITTETPRMLESGEVELAVGFMP----------QLDAGFYQQKLFPQRFVV 170 Query: 183 WLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 H AL + +L+ +L H+++ + +D L+E R + + +P + Sbjct: 171 LAASRHVALGDSMSLEYYLSAGHVTVTPSGTGHSIIDRTLREQQLHRHVVLDVPNYLAIA 230 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 + AQ D L + + +P + WH R + Sbjct: 231 DIVAQTDLLA-TVPQKLADLMSSSVDARRYPVPFEIP-------QYDVKQHWHARTHQDA 282 Query: 303 KIVWLRETIKNLY 315 WLR + L+ Sbjct: 283 GHRWLRALLAELF 295 >UniRef50_B5XSE9 Transcriptional regulator, LysR family n=6 Tax=Enterobacteriaceae RepID=B5XSE9_KLEP3 Length = 296 Score = 218 bits (557), Expect = 2e-55, Method: Composition-based stats. Identities = 42/313 (13%), Positives = 102/313 (32%), Gaps = 25/313 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 + L L ++ +E + +AA+R+++ A+S+ + +L LF + L+ T Sbjct: 1 MSLRALRHFVVVAEELHMHRAAERLHIAQPALSQQIKQLEQRLGVVLFSRANRRLTLTAA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHH-QTPRGLKFELAAESPLMM-IMLNALSKQIYQRYPQ 125 + Q ++M++ + + L S M L L +++ +P Sbjct: 61 GEAFLQKTRLALEMADQAVLDAQRTARGEQGRLHLGYVSSAMYDSKLPGLLRELRADWPG 120 Query: 126 ATIKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 + L D L +A+ +DI P A+ + C+ L Sbjct: 121 IELSLVQGDVQMLYEALLDLRLDIAIIRAPLASP--------PDALVVRPFVREKLCLAL 172 Query: 185 RKDHPALH-QTWNLDTFLRYPHISI--CWEQSDTWALDNVLQELGRERTIAMSLPEFEQS 241 + HP NL + IS+ + + G + + + Sbjct: 173 YQQHPLAGVGALNLASLRTDNWISLDDPQGTGLEQVFIDACRVAGFTPQVVQRINDVTSM 232 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 + + + + L + + + + Q + E ++++H+ + Sbjct: 233 ISLVSAGVGVALVPVSARALRLDN----------VVYIDLQDRLAESELSMVYHRHF-RS 281 Query: 302 PKIVWLRETIKNL 314 + + + Sbjct: 282 AVVRKVISLLNAA 294 >UniRef50_B7VQ45 Transcriptional regulator n=8 Tax=Vibrionales RepID=B7VQ45_VIBSL Length = 311 Score = 218 bits (557), Expect = 2e-55, Method: Composition-based stats. Identities = 92/309 (29%), Positives = 135/309 (43%), Gaps = 9/309 (2%) Query: 9 DLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLM 68 D+NLLLCL +L++ERSV+K A+R+ ++ SAVSK L KLRA FDDPLF GL PTP Sbjct: 11 DMNLLLCLHVLIEERSVSKTAERLFLSQSAVSKQLTKLRALFDDPLFERESKGLFPTPKA 70 Query: 69 VSMEQNLAEWMQMSNLL-LDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQAT 127 +++ + + + L + + F + + P T Sbjct: 71 LALAPKIHQILLQIEKLTVPEVFDPKDSERTFTIDLVETAYTAIYPHFMPTALADAPHIT 130 Query: 128 IKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKD 187 I W DS + + EVD G E R+ + +P +DY L D +R D Sbjct: 131 INSSTWSSDSFKRLLKREVDFGIGIFELDERASTHVQCIPDELDYVELCLDYSVCLMRND 190 Query: 188 HPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQ 247 HPAL + WNL TFL+Y HI + + W L VL E A ++ + ++ + Q Sbjct: 191 HPALQEEWNLGTFLKYRHIQLVTGGAGDWLLMEVLNSKQLEINKAANVSDITSAIKLCKQ 250 Query: 248 PDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWL 307 D L+ + Y +L + +P+ LLWHK P WL Sbjct: 251 SDLLM-CYPYNSVRDYIDSGELVMKPVPVDLVPGG-------LFLLWHKYFDSEPSHKWL 302 Query: 308 RETIKNLYA 316 R+ I Sbjct: 303 RDLIIEQTR 311 >UniRef50_A6EW06 Transcriptional regulator n=2 Tax=Marinobacter RepID=A6EW06_9ALTE Length = 315 Score = 218 bits (557), Expect = 2e-55, Method: Composition-based stats. Identities = 67/315 (21%), Positives = 130/315 (41%), Gaps = 20/315 (6%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 + T +L LL +M ERSVT+AA R+ +T AVS +++++R ++DPLFV + P Sbjct: 1 MKTQELQLLYIFDAIMTERSVTRAADRLAMTQPAVSNAISRMRQIWNDPLFVRKGRNIEP 60 Query: 65 TPLMVSMEQNL-AEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRY 123 T +S+ + ++N + F +A ++ ++ L + + Sbjct: 61 TSYALSLWDQVGDPMFALTNAVSATQFDPASARRTFRIAVTDVIVEMIWRQLIDLLEREA 120 Query: 124 PQATIKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCV 182 P + + + S D + VD+ +L+ ++ L + Sbjct: 121 PGVDVHAVPYTPEGSYDDLRSAHVDLAIG----------VLNQHDYSLRSTWLLDSGFVL 170 Query: 183 WLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 +R DHP + ++ FL H+ + ++D+ L + G+ R IA ++ F Sbjct: 171 AMRADHPLAGRQITMEEFLEARHLLVTMSGDAHGSVDSYLDQKGQSRRIAATMNHFASVP 230 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 + + + + A Q + L + LP D + L+WH R+ P Sbjct: 231 QVLRESNLIA-AVPELISQDCGFVDGLWMGELPFDVDPT-------SLYLIWHARHDREP 282 Query: 303 KIVWLRETIKNLYAS 317 I+W+R I+ L + Sbjct: 283 GIIWIRNHIERLLQA 297 >UniRef50_Q39AY8 Transcriptional regulator, LysR family n=1 Tax=Burkholderia sp. 383 RepID=Q39AY8_BURS3 Length = 331 Score = 218 bits (557), Expect = 2e-55, Method: Composition-based stats. Identities = 68/322 (21%), Positives = 119/322 (36%), Gaps = 25/322 (7%) Query: 4 SITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLS 63 + +DLNLLL +L + RS T+AA +++T +VS +L +LR FDD LFV + G+ Sbjct: 22 DLRNIDLNLLLVFDVLYRTRSTTRAADALHLTQPSVSNALKRLRTLFDDALFVKTADGMQ 81 Query: 64 PTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPR--GLKFELAAESPLMMIMLNALSKQIYQ 121 PTP ++ + E + L P F L I + L + + Sbjct: 82 PTPRADAIAARVDEGLASLRTALQAGRAFDPATSTRTFRLYTSDLGQAIFMPPLVAHLRR 141 Query: 122 RYPQATIKLRNWDYDSLDAITR-GEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 P I + D+ + + G++D+ + + L + LF + Sbjct: 142 VAPGIRIVTADPPLDAAQQMMKLGQIDLALG----------MFTGLHADFHQQRLFHETY 191 Query: 181 CVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQE----LGRERTIAMSLP 236 +R DHP + T + F H+S + L G R + + L Sbjct: 192 VALVRNDHPMIGATLTAEQFFAADHVSYTPTAGSHAHFEAALYALSPHAGSTRHVVLQLA 251 Query: 237 EFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHK 296 + + D + R + +L + V+LP WH+ Sbjct: 252 HSFGLERIVSSSDLIA-CIPSRLARELARLQDVRAVSLPFD-------TAPADIAQFWHE 303 Query: 297 RNSHNPKIVWLRETIKNLYASM 318 R + WLR + +L+ + Sbjct: 304 RYQRDEGHQWLRTLVYDLFHDL 325 >UniRef50_A9KT60 Transcriptional regulator, LysR family n=1 Tax=Clostridium phytofermentans ISDg RepID=A9KT60_CLOPH Length = 292 Score = 218 bits (557), Expect = 2e-55, Method: Composition-based stats. Identities = 34/308 (11%), Positives = 92/308 (29%), Gaps = 21/308 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 + + +++ + +AA+R+ ++ A+S+++ +L + LF LS T + Sbjct: 1 MTIRHFKIFIAVVECGKMRRAAERLYISQPAISQAIQELEEHYQVKLFERLSQKLSITEM 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQAT 127 + + +++ + + L + +LN L + + Y Sbjct: 61 GELLLPYARQAVELFENTEQAMKNAGEVS-RIRLGTSISVGTTILNDLLDRYEEIYGNLD 119 Query: 128 IKLRNWDYDSLDAI-TRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRK 186 + + +++ + ++D+G + + + D + + K Sbjct: 120 TSVIIHNTQTIETLIHSCKLDLGIVEGFV----------IDKGMKQIPICEDELVLVVGK 169 Query: 187 DHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMA 245 HP + + IS + + +L E + E Sbjct: 170 SHPLYQKEIITFEELQNEILISREEGSVNRNQFEQLLLERDITMQKKWTCTNSEAIKIAV 229 Query: 246 AQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIV 305 L A + L + + + L++HK + + Sbjct: 230 EHGRGL--AILSQMIIRKEVEEGT------LKILQLEDIHVHRKIHLIYHKDKFLSKPLK 281 Query: 306 WLRETIKN 313 E + Sbjct: 282 QFIELCLS 289 >UniRef50_B9J8D6 Transcriptional regulator protein n=69 Tax=Proteobacteria RepID=B9J8D6_AGRRK Length = 298 Score = 218 bits (557), Expect = 2e-55, Method: Composition-based stats. Identities = 40/318 (12%), Positives = 85/318 (26%), Gaps = 26/318 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L + + +E + T+AA+RI + +S + L PLF P G T Sbjct: 1 MELRHIRYFLAVAEELNFTRAARRIGIGQPPLSNQIRDLEEEIGAPLFRRLPHGAELTEA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMI-MLNALSKQIYQRYPQ 125 + + + + + ++ + + + YP+ Sbjct: 61 GQVFLREARAILTRAGQAKALALRAARGELGRLRVGFTGSAAFSPIVPSSVRSFRRTYPE 120 Query: 126 ATIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 + L L+ + E+D F + P VL + + L Sbjct: 121 IDLTLEEAHTTRLLERLDAEELDAVFIRP---------GRTGPPGFRSHVLGEESMVIAL 171 Query: 185 RKDHPAL-HQTWNLDTFLRYPHISICW--EQSDTWALDNVLQELGRERTIAMSLPEFEQS 241 HP T L T P + S + + G E + P+ Sbjct: 172 PSSHPLAEADTLPLSTLSDEPFVLFPRAAGPSLFDEIIAACRRAGFEPILGQIAPQITSI 231 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 + A + + Q+ + + L + + Sbjct: 232 ANLIAVELGVSVVPL---AVAEIQVPGVSYIP-------ISGDGPVARLALATRRD-ECS 280 Query: 302 PKIVWLRETIKNLYASMA 319 + + A + Sbjct: 281 AVVRNFIARVLATKAELG 298 >UniRef50_Q3JR86 LysR-family regultor n=70 Tax=Proteobacteria RepID=Q3JR86_BURP1 Length = 508 Score = 218 bits (556), Expect = 2e-55, Method: Composition-based stats. Identities = 71/324 (21%), Positives = 134/324 (41%), Gaps = 24/324 (7%) Query: 1 MKKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPL 60 M + +D LL L L+ ERSVT+AA ++N + A+S +L +LR DPL V Sbjct: 200 MSQQREAIDTYLLRVLHTLLMERSVTRAAVKLNQSQPAISAALRRLRDITGDPLLVRGKS 259 Query: 61 GLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQ 118 G+ PT + + + + ++ + + H+ P + + L ++ + + ++ Sbjct: 260 GMVPTEYGLRLLEPVQNALREIERIKFQQHNFDPATSIRCYRIGCPDYLNVLFVPTVVER 319 Query: 119 IYQRYPQATIKLRNWDY--DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLF 176 Q P AT++ + D A+ G++DI P + LF Sbjct: 320 FRQAAPNATLEFHSLGPAFDYELALEDGKLDIVVGNWPEP----------PEQLHLSNLF 369 Query: 177 SDVPCVWLRKDHPALHQ-TWNLDTFLRYPHISICWEQ-SDTWALDNVLQELGRERTIAMS 234 D + HP + LD +L PH++ A+D L +R + ++ Sbjct: 370 VDEIVCLMSNSHPFAKRGGLTLDQYLNAPHLAPTPYSVGQRGAIDVHLARERLKRHVVVT 429 Query: 235 LPEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLW 294 LP F + ++ + D + T + +Y + L +V PL F + LW Sbjct: 430 LPYFNLAPYVLVKSDLI-FTTTRLFADHYAKFLPLSVVPAPLDFPPM-------QYYQLW 481 Query: 295 HKRNSHNPKIVWLRETIKNLYASM 318 H+R ++ ++ WLR + ++ Sbjct: 482 HERCHYSDEVRWLRGLVAEATRTL 505 >UniRef50_Q21B31 Transcriptional regulator, LysR family n=2 Tax=Alphaproteobacteria RepID=Q21B31_RHOPB Length = 364 Score = 218 bits (556), Expect = 2e-55, Method: Composition-based stats. Identities = 44/310 (14%), Positives = 87/310 (28%), Gaps = 23/310 (7%) Query: 9 DLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLM 68 + L + T AA+ +NV+ ++ + +L LF + TP Sbjct: 6 SFRQVRAFLALARHLKFTSAAQELNVSQPTLTVQINQLEQQLGIRLFDRDKRRVELTPAG 65 Query: 69 VSMEQNLAEWMQMSNLLLDKPHHQT-PRGLKFELAAESPLMMIMLNALSKQIYQRYPQAT 127 ++ + + +L T + +AA + L K ++ P Sbjct: 66 RNILPLMERLSLNMDEVLLAASDLTYAKRGIIRVAALPSVAASFLPRGIKDFREQNPGII 125 Query: 128 IKLRN-WDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRK 186 I + + + + + EVD G S +I + SD C + Sbjct: 126 IDVWDVVGEEIIKLVKAEEVDFGIGTH----------FSADKSIKVQDYLSDSLCAFFPV 175 Query: 187 DHPA--LHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 +HP + P + S + + G E I M +L M Sbjct: 176 EHPLNTAASVVYVRDVASCPLVVTRKNSSVRVLFERSMAREGCELNIVMETNYMSTALSM 235 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 A + +A P + L + ++ + P Sbjct: 236 ARA--GVGVAILPSTAVEAGNMAGLSFKPIDP-------PHFNRRVGIICKADRTLQPIA 286 Query: 305 VWLRETIKNL 314 E + + Sbjct: 287 SHFVEELLRM 296 >UniRef50_A1K6J7 LysR-family transcriptional regulator n=5 Tax=Proteobacteria RepID=A1K6J7_AZOSB Length = 303 Score = 218 bits (556), Expect = 3e-55, Method: Composition-based stats. Identities = 42/312 (13%), Positives = 104/312 (33%), Gaps = 24/312 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +D+ L + +E ++ +AA R++++ +++ + +L D LFV +P G+ T Sbjct: 1 MDIRQLRYFIAVAEEANIGRAATRLHMSQPPLTRQIQQLEEELDTQLFVRTPRGMELTQA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + ++ + ++A ++ + L YP Sbjct: 61 GTLFLAEARNIRALIEQATERTQRAGQGKLGRLDVAIFGSAILDRIPKLILNFRNEYPDV 120 Query: 127 TIKLRNWD-YDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + L + + A+ + + +GF+ + I EV+ ++ + + Sbjct: 121 NVVLHTMTKAEQISALRQNRITVGFNRMLAPLP----------DIRSEVIATESLLLAVN 170 Query: 186 KDHPALHQT-WNLDTFLRYPHISICWE--QSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 + P Q D R P I + + + + G +A + + + Sbjct: 171 LNDPLAAQPALPFDVLARRPVILFPSGARPNFVDKVLALCEARGFLPEVAQEVGDAVTGV 230 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 + A + P +V LP ++ V + ++ H+P Sbjct: 231 ALVAS--GFGVCMVPESATTLQYPG---VVYLPFEDAPAE---ARVDLSCIYRAD-DHSP 281 Query: 303 KIVWLRETIKNL 314 + +I+ Sbjct: 282 ILSTFLASIRAT 293 >UniRef50_C1YJH3 Transcriptional regulator, COG0583 n=1 Tax=Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 RepID=C1YJH3_NOCDA Length = 302 Score = 218 bits (556), Expect = 3e-55, Method: Composition-based stats. Identities = 50/314 (15%), Positives = 95/314 (30%), Gaps = 16/314 (5%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 + + L L L+ + + SVT AA+ + V+ S VS +L+ L A LFV SP G+ P Sbjct: 1 MGDVSLRQLEYLRAIARLGSVTAAARELFVSQSTVSTALSDLEAALGVTLFVRSPKGMRP 60 Query: 65 TPLMVSMEQNLAEWMQMSNLLLDKP-HHQTPRGLKFELAAESPLMMIMLNALSKQIYQRY 123 T + L + + + + + I+L + + +RY Sbjct: 61 TASGQRALAVADDVRASLEQLRETASREREEVEGDLTIGCYATIAPILLPRVIAEFSRRY 120 Query: 124 PQATIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCV 182 PQ + + LD + +D+ + R + + + L SD P Sbjct: 121 PQVRLSFVEASHGTLLDDLLNSRIDLAITYHYELASVRPAV-----GVASQWLRSDPPYA 175 Query: 183 WLRKDHPA-LHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQS 241 D P L P I + G + FE Sbjct: 176 LTPVDGPLSAKGELTLADLAVEPLILFDLPPGG-DYFLGLFDRAGLTPNVRFRTTSFEMV 234 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 + A+ L T + + L + + ++ Sbjct: 235 RALVARGLGNALLTQRTVLERSYEDLPYATRELDIRSEGLG-------IEVMRLAGRKPV 287 Query: 302 PKIVWLRETIKNLY 315 ++ + + + Sbjct: 288 RRMEAFVDVCREVV 301 >UniRef50_B4ETA7 LysR-family transciptional regulator n=37 Tax=Enterobacteriaceae RepID=B4ETA7_PROMH Length = 296 Score = 218 bits (556), Expect = 3e-55, Method: Composition-based stats. Identities = 43/304 (14%), Positives = 96/304 (31%), Gaps = 23/304 (7%) Query: 7 TLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTP 66 + L L +++ S T+A++++ ++ SAVS SL L LF L Sbjct: 2 RITLRQLEVFTEVLKSGSTTQASQQLALSQSAVSASLTDLENQLGVQLFDRVGKRLVTNE 61 Query: 67 LMVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + + + +AA + + +L + ++ YP Sbjct: 62 HGRLLYPRA---LSLLERATEVEQLFQAGNGALRIAASTTIGNYILPQMLGNFHRNYPDI 118 Query: 127 TIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 +++ + + +++ VD+G + + + D ++ Sbjct: 119 PLEMSIGNTEEVVKSVSEFRVDLGLIEG----------ACQSSELISQKWLLDEMVIFCS 168 Query: 186 KDHPALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 +HP +T L P I L+++L I M L E Sbjct: 169 PEHPLAKAKTVTLADLQSAPWILRENGSGTRDVLNHLLFASLPGYRIEMELGNSEAIKHA 228 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 + ++ R L + + KL+ L++H++ + + Sbjct: 229 VMYE--MGISCLSRRVIQDQIESG------SLKEIKVEGLKLQRTLYLVYHRQKHVSDAL 280 Query: 305 VWLR 308 L Sbjct: 281 KKLL 284 >UniRef50_C8NRP5 Transcription regulator n=2 Tax=Corynebacterium efficiens RepID=C8NRP5_COREF Length = 309 Score = 218 bits (556), Expect = 3e-55, Method: Composition-based stats. Identities = 43/305 (14%), Positives = 92/305 (30%), Gaps = 27/305 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++ L + R+ ++AA ++++ +S+ + L PLF + G+ T Sbjct: 2 IEARQLKYFLAVASARNFSRAADDLHISQPPLSRQIRLLEKQIGTPLFERTSQGVELTAA 61 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + + + L ++ L KQI + P+ Sbjct: 62 GSFLAERAPAILNELEEVERDVRAIGQGSMGVLRLGFVGTATHQLMPQLLKQITIQLPEV 121 Query: 127 TIKLRN--WDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 +++ D + ++D I+ E D + + Sbjct: 122 EVRVSGEKLTPDLERLLFTRQLDAAVLRPPVSSP----------DIELESFGVDDFMLAV 171 Query: 185 RKDHPA--LHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 HP T +P I+ + + + + G E +A PE L Sbjct: 172 HPGHPLYDQEGTIPFTDLAEHPIIAFKEGSAAEQIIRHAAHQAGFELRVAHHAPETSTVL 231 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 + + L +A P + +L + + + L W K N +P Sbjct: 232 ALVSA--GLGIALVPH-GSIPQPMGELRMREV--------SGGPTIGLALAWLKGN-RSP 279 Query: 303 KIVWL 307 + L Sbjct: 280 ILRQL 284 >UniRef50_Q08NF6 Transcriptional Regulator, LysR family n=1 Tax=Stigmatella aurantiaca DW4/3-1 RepID=Q08NF6_STIAU Length = 322 Score = 218 bits (556), Expect = 3e-55, Method: Composition-based stats. Identities = 75/317 (23%), Positives = 138/317 (43%), Gaps = 21/317 (6%) Query: 4 SITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLS 63 ++++D NLL+ L L+QE V +A+KR+ ++PSA S +LA+LR D L V + L Sbjct: 14 QLSSIDTNLLVVLDALLQEGHVGRASKRVALSPSATSHALARLRELLGDELLVRAGRQLV 73 Query: 64 PTPLMVSMEQNLAEWMQMSNLLLDKPHHQTP--RGLKFELAAESPLMMIMLNALSKQIYQ 121 TP +++ + + M+ +L P F + + ++L L + + Sbjct: 74 LTPRAIALAPQVRQLMEQMERILRPAESFHPAKLEHTFRVLTTDHIEFVLLRPLDRFLTD 133 Query: 122 RYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPC 181 P+ + R D+++ + G D+ F + + LP I + LF D Sbjct: 134 EAPRVILHNRPMVPDAVEELRGGRADLAFG----------VFTDLPDDISSQELFKDRFV 183 Query: 182 VWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQS 241 +R+ HP L + L F H+ + + T +D +L E +R + +L F + Sbjct: 184 TLVREGHPVLARPLTLKRFAELDHVLVAPRGTATSRMDLLLAERNLKRRVVRTLGSFLSA 243 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 F AQ D+ + + R L L ++ P+ + E T +WH+R + Sbjct: 244 PFFVAQSDH-AVTLSARIADALAPLLGLRVLEPPIAY--------EYTLTQIWHRRWDAD 294 Query: 302 PKIVWLRETIKNLYASM 318 P WLR+ + + + Sbjct: 295 PAHAWLRQLTARVASGL 311 >UniRef50_D0YA85 Transcriptional regulator, LysR family n=5 Tax=Klebsiella RepID=D0YA85_KLEVA Length = 308 Score = 218 bits (556), Expect = 3e-55, Method: Composition-based stats. Identities = 46/314 (14%), Positives = 111/314 (35%), Gaps = 19/314 (6%) Query: 7 TLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTP 66 + + + + +E S+ A++ + V+ A++K++ +L LFV G++ T Sbjct: 10 QIKFHHIRAFVEVAREGSIRGASRALAVSQPALTKAIKELEEGLSAQLFVRRSQGVALTE 69 Query: 67 LMVSMEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNALSKQIYQRYPQ 125 S Q+ + ++ D+ + + + + + ++ ++ + +Q++PQ Sbjct: 70 NGESFYQHASLILEELRAAQDELLQRQGEQAGQINIGLGASVARSLMPSVICRFHQQHPQ 129 Query: 126 ATIKLRNWD-YDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 +++ ++ + +GE+D + +E LF V+ Sbjct: 130 VKVRIMEGQLLAMINELRQGELDFTINTYYP--------GPYDHEFSFEKLFEKPFAVFA 181 Query: 185 RKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 R HPA T +L + + S L + L + G + + F + + Sbjct: 182 RAGHPAAQAT-SLGELMDHHWTMPTPRGSYFKQLQDRLNQAGLAPKVDIVCETFSSCISL 240 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 + D L + +L PL+A L + + L+ + P Sbjct: 241 VVKSDFLSILPV--------ELGNDPLMADKLVMIPVRDVLPTATYYLIQRRDTRQTPLT 292 Query: 305 VWLRETIKNLYASM 318 L + + Sbjct: 293 ASLITLFRRQSRQL 306 >UniRef50_C2FUK4 Transcriptional regulator n=2 Tax=Sphingobacterium spiritivorum RepID=C2FUK4_9SPHI Length = 300 Score = 218 bits (556), Expect = 3e-55, Method: Composition-based stats. Identities = 54/315 (17%), Positives = 101/315 (32%), Gaps = 29/315 (9%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L +L +E KAA+R+ ++ +S+ + L LF + ++ TP Sbjct: 1 MELRHLHYFAILAEELHFGKAAERLFISQPPLSRQIKDLEEELAVILFERNNKRVNLTPA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQ-TPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + +++ + K F L S +L L K + +RYP Sbjct: 61 GAYFLKETQDILRLLDNAKIKARQIQDAVSGTFRLGYISSTPKALLARLLKMVKERYPHL 120 Query: 127 TIKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + L L A+ G++D+G L + L + C+ Sbjct: 121 HVCLYETSTQKQLTALENGKLDLGIVRTPI----------LSNQLCTRTLLKESFCLATT 170 Query: 186 KDHPALHQTWNLDTFLRYPHISICWEQS--DTWALDNVLQELGRERTIAMSLPEFEQSLF 243 D + L +++ E + + LG + + + L Sbjct: 171 PD--FNANSGKLSELA---YVTYSKEYAPEYYRQFVSYCHYLGFDPHVLHECNTMQSILE 225 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 + A L A P+ Q Q+ ALP + L R S +P Sbjct: 226 LVAS--GLGAALVPQSVQNQALHLQICFSALP-AVPIYTETVLAFD-------RESRHPA 275 Query: 304 IVWLRETIKNLYASM 318 + I Y + Sbjct: 276 LSAFTAIITEEYKAF 290 >UniRef50_A4BHD6 Transcriptional regulator lysR family protein n=1 Tax=Reinekea blandensis MED297 RepID=A4BHD6_9GAMM Length = 298 Score = 218 bits (556), Expect = 3e-55, Method: Composition-based stats. Identities = 48/314 (15%), Positives = 105/314 (33%), Gaps = 26/314 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +DLN L + + S ++A +R+ +T A+SK +A L + LF + T Sbjct: 1 MDLNSLEAFLTVAELGSFSRAGERLFLTQPAISKRIANLESQLGTALFDRIGREVYLTEA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNALSKQIYQRYPQA 126 ++ + + T + LA+ + + L + ++ P A Sbjct: 61 GQMLQNRAQTLIDELRDIQSSVTQLTSNDIRQLNLASSHHIGLHYLGPILRRFVSNNPSA 120 Query: 127 TIKLRNWDYDS-LDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + +R + + ++A+ + +++I + S L + L+ D + Sbjct: 121 KLDVRFMESEQAVNALLKRDIEIALTTIPSP---------LHRDLQATTLWQDKLHFVVS 171 Query: 186 KDHPALHQ--TWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 KDHP + L+ I + + ++ + MS+ E Sbjct: 172 KDHPLAGRKDRLRLNELAHLTAILPDRQTTTFQIIEKTFERHHIPLKRVMSVNYLETIRA 231 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 + + L + P N L ++ +L ++ H+R + + Sbjct: 232 LVSHN--LGWSLLPEVMLNEN-----------LTCLSIERVELSRNLGIIQHRRRTVSRG 278 Query: 304 IVWLRETIKNLYAS 317 L E S Sbjct: 279 TRALIELAVEASQS 292 >UniRef50_B0TCS4 Transcriptional regulator, lysr family n=2 Tax=Firmicutes RepID=B0TCS4_HELMI Length = 310 Score = 218 bits (556), Expect = 3e-55, Method: Composition-based stats. Identities = 50/302 (16%), Positives = 96/302 (31%), Gaps = 16/302 (5%) Query: 14 LCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSMEQ 73 L+ +E S++KAA+++ +T AVS+S+ +L LF +P G+ T + Sbjct: 9 RAFYLVAREGSISKAAEQLYITQPAVSRSIQQLEEKLGCVLFFRTPKGVKLTKEGELLFP 68 Query: 74 NLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNALSKQIYQRYPQATIKLR- 131 + + + T + +AA + L K+ + YP I + Sbjct: 69 YIEQAFNFIAVGEKTLAQITALENGEITIAAGDTICKNYLPPHLKRFKEAYPGIRIHVTN 128 Query: 132 NWDYDSLDAITRGEVDIGFSGRE-SHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPA 190 ++ + +G+VDIGF + S L S+ + + F V K Sbjct: 129 ENTPSTIRLLKKGKVDIGFVHAPVVNDPSATALLSIHEVLQIQDCF-----VVGEKYKEL 183 Query: 191 LHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQPDN 250 + +L+ RYP I + S ++N + E L +FE + A Sbjct: 184 AARPRSLEELARYPLILLEKGSSSRIYIENFFAQHNIELKPEFELSDFELLIRFAQIDFG 243 Query: 251 LLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWLRET 310 + + L + + Sbjct: 244 AACVIKNFVADELARGSLYEIQPL--------TPIPPRHVGVAHLQTIPLRTAAKAFLSF 295 Query: 311 IK 312 + Sbjct: 296 LL 297 >UniRef50_A8FAL6 LysR family transcriptional regulator n=10 Tax=Bacillus RepID=A8FAL6_BACP2 Length = 298 Score = 217 bits (555), Expect = 3e-55, Method: Composition-based stats. Identities = 47/319 (14%), Positives = 100/319 (31%), Gaps = 35/319 (10%) Query: 3 KSITTLDLNLLLCLQL-LMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSP-L 60 S D+ +++ S T AA+ +N+T SAVS ++A L +D LF+ Sbjct: 1 MSFVRFDI------VAKVVELGSFTAAAEALNMTQSAVSHAVASLETEWDVSLFIRDRKK 54 Query: 61 GLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTP-RGLKFELAAESPLMMIMLNALSKQI 119 G+ T + ++ ++ E + + + + + +L L Sbjct: 55 GIMLTDIGQTLLPHIREVLNRLEKIQQEIALTKNIETGLIRIGTFASASACLLPKLLVSY 114 Query: 120 YQRYPQATIKLRNWD-YDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSD 178 +++P+ K + L+ + G +D+GF + A D L D Sbjct: 115 QKKHPKIEFKFYEGTYEEILEWLDSGIIDVGFV----------VKGYADEAFDLLPLIKD 164 Query: 179 VPCVWLRKDHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPE 237 V +H Q+ ++ P I ++++ E + + + Sbjct: 165 EMVVAYHPNHRFHQQSIVDITDLADEPFIMPT--GMYQSHVEDIFAEAQLKPATLFEVHD 222 Query: 238 FEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKR 297 M + L + P QL + L Sbjct: 223 CTTIARMV--GEGLGVTIGPELFLKTQQLVHIR----------QLNVSHHREVALACPSL 270 Query: 298 NSHNPKIVWLRETIKNLYA 316 + +P + + ++A Sbjct: 271 SQASPAVKEFFHVAEAVFA 289 >UniRef50_C7QKA9 Transcriptional regulator, LysR family n=1 Tax=Catenulispora acidiphila DSM 44928 RepID=C7QKA9_CATAD Length = 299 Score = 217 bits (555), Expect = 3e-55, Method: Composition-based stats. Identities = 43/314 (13%), Positives = 86/314 (27%), Gaps = 20/314 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++ L+ Q + S T+AA +N S+V+ + L A LF + T Sbjct: 1 MEFQQLVTFQRVATVLSFTRAAADLNYAQSSVTNQIRNLEASLQTELFDRLGSKIQLTDA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQAT 127 + + + +++ + + L L + + RYP Sbjct: 61 GQRLLLHAERLLALADEARADVAGPAEPSGTLTIGTMESITSYRLPPLLELFHYRYPAVH 120 Query: 128 IKLRN-WDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRK 186 + LR D+ A+ +G D+GF +D VL + + Sbjct: 121 LALRPSLCADTCRALRQGTFDVGFLMEPDTG---------HAGLDSVVLSKERLVLVAAP 171 Query: 187 DHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMA 245 P ++ + P ++ S + L + E Sbjct: 172 SFPLASAPTVTIEALRKVPVLATESGCSYRDLFEIELTAEQLTPASFLEFGTIEAIKRGV 231 Query: 246 AQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIV 305 L ++ P V EV L W + + ++ Sbjct: 232 IA--GLGVSLLPEITVADEIASGSLTV-------LPWTPPFEVVIQLAWRRGKRLSRELQ 282 Query: 306 WLRETIKNLYASMA 319 + L + Sbjct: 283 LFIDQTIRLVREES 296 >UniRef50_Q0VLU8 Transcriptional regulator, LysR family n=2 Tax=Alcanivorax RepID=Q0VLU8_ALCBS Length = 310 Score = 217 bits (555), Expect = 3e-55, Method: Composition-based stats. Identities = 73/316 (23%), Positives = 121/316 (38%), Gaps = 23/316 (7%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 ++ DLNL + + E S+T+AAK +N+T AVS +LA+LRA +DPLFV + Sbjct: 1 MHVSRFDLNLFVVFDAIYTEGSLTRAAKVLNLTQPAVSHALARLRARLNDPLFVRQGSRM 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKP--HHQTPRGLKFELAAESPLMMIMLNALSKQIY 120 PT +M + + L + + F L L +L AL Q Sbjct: 61 VPTARARAMVSPVRHALGGFQRCLSEEGGFDASEAERTFVLGLRDGLEARLLPALMSQFM 120 Query: 121 QRYPQATIKLRNWDYDSLD-AITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 P ++ + + G +D+ +++ +LP AI+++V+ Sbjct: 121 DEAPGIKLQSLTVSRRQMATELASGRLDLA----------CDVMLALPEAIEHQVVLEGP 170 Query: 180 PCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFE 239 V +R+ HP +L +L H+ + + D L G R I + ++ Sbjct: 171 LVVLMRESHPLAQG-MDLPDYLAAQHVLVSSRREGPGLEDFGLARQGYRRHIRLRCQHYQ 229 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 +L Q D LL T P L P + L WH+ S Sbjct: 230 AALSTVQQTDLLL--TMPASLAGQLSDQGLVWKPFP-------GGLPGLEMHLYWHRDQS 280 Query: 300 HNPKIVWLRETIKNLY 315 +P WLR+ + Sbjct: 281 ADPAHSWLRQRVLAQL 296 >UniRef50_B0PCN4 Putative uncharacterized protein n=2 Tax=Bacteria RepID=B0PCN4_9FIRM Length = 298 Score = 217 bits (555), Expect = 3e-55, Method: Composition-based stats. Identities = 50/312 (16%), Positives = 94/312 (30%), Gaps = 22/312 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 + L L + + +VT+AA+ +N++ +S L L PLF L TP Sbjct: 1 MTLKQLEYFLEIARLGNVTRAAQSLNISQPPLSLQLKSLEDELGTPLFRRDKRHLEITPA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRGL-KFELAAESPLMMIMLNALSKQIYQRYPQA 126 +++ + + + H + +A + +L L + + Y Sbjct: 61 GKLLQERAQAILALLDETTGDIHALSTEKQITLRIATIGSVNNRLLPNLIARFSRDYFYV 120 Query: 127 TIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 ++ L+ +T G+VD GF + + A+ SD + Sbjct: 121 NFRVIEGRTEHVLEHVTSGDVDFGFVREPFNTSHFRSVLIHDPALA--PGQSDHFVTIAQ 178 Query: 186 KDHPAL------HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFE 239 T +D P I Q + ++ G I E Sbjct: 179 PQFYDAYYEGDSRDTIEIDELKDKPLII---HQRYREMILGACRKRGFNPYIICENDEIH 235 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 SL A + +A AP + L + L L+W+ Sbjct: 236 SSLSWARA--GIGIAIAPYTSAILSIDPGLVIRRLTFTAFIPW-------VRLVWNPSCQ 286 Query: 300 HNPKIVWLRETI 311 + + + I Sbjct: 287 LSSEALAFMNMI 298 >UniRef50_UPI000050F7F0 LysR family transcriptional regulator n=1 Tax=Brevibacterium linens BL2 RepID=UPI000050F7F0 Length = 298 Score = 217 bits (555), Expect = 3e-55, Method: Composition-based stats. Identities = 41/316 (12%), Positives = 99/316 (31%), Gaps = 28/316 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L + QE +AA+ +++ A+S+ + L D LF + + T Sbjct: 1 MELRHFSAFLAVAQELHFGRAAETLHIAQPALSQMIRSLEKDLDVQLFERTTRRVRLTSS 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQ-TPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 ++ + + + +L+ L++++ R P Sbjct: 61 GEALIEPARSIQAQVEGARRIARAAKEGVVGRVRIGFGGTSGYSILSLLAREVAHRQPGI 120 Query: 127 TIKLRNWD--YDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 ++++ +S A+ G +D+G P I V+ + V + Sbjct: 121 SLEMHPQTYSGESALAVRDGTMDMGIISPP-----------APAGIAVHVIRQERVMVAV 169 Query: 185 RKDHPAL-HQTWNLDTFLRYPHI--SICWEQSDTWALDNVLQELGRERTIAMSLPEFEQS 241 H Q+ ++ P I + A+ + + G IA P+ Sbjct: 170 PTSHELADAQSVSMADLKEQPFITYAPSHGSQVREAMMRLADQAGYLPHIAQEAPDPYSL 229 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 L + + + + ++ + V L + L W + N + Sbjct: 230 LALVGAQVGIAIVVESS---NHIRIDGVTYVRL-------AEGGNAFTLALGWRRNNP-S 278 Query: 302 PKIVWLRETIKNLYAS 317 + + E ++ + Sbjct: 279 KALARVVEIVQEILPE 294 >UniRef50_Q393U0 Transcriptional regulator, LysR family n=6 Tax=Burkholderiales RepID=Q393U0_BURS3 Length = 310 Score = 217 bits (555), Expect = 3e-55, Method: Composition-based stats. Identities = 73/316 (23%), Positives = 134/316 (42%), Gaps = 22/316 (6%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 ++ ++DLNLL+ L L+ E+ VT+AA ++ ++ SA+S +L +LR D L + + G+ Sbjct: 1 MNLRSVDLNLLVALDALLTEKHVTRAATKVGLSQSAMSSALGRLRILMRDELLIRNATGM 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDK--PHHQTPRGLKFELAAESPLMMIMLNALSKQIY 120 PTP + +E+ L + + + LL+ F L L +++ L Q+ Sbjct: 61 EPTPRALELEEPLRQLLHQAERLLESDGAFDPATTAGHFRLRMSDVLEYLLMPPLLAQLE 120 Query: 121 QRYPQATIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 Q P T+ + + ++ A+ ++D+ S H + + LF D Sbjct: 121 QEAPGVTLDVVHLSPGQTVTALEADDIDVAVSMDLEHAGA----------VQAMPLFDDR 170 Query: 180 PCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFE 239 + +DHP + LD FL PH+ + +D +D L + R R + +++P + Sbjct: 171 MVCVMARDHPCAAEALTLDLFLSLPHLKVSISSTDGRYVDAKLAGMRRARNVVLNVPHWL 230 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 + +A L L ALP +++ WH+R+ Sbjct: 231 VVPHLLRHSSM--VAVMSARLAERFAADGLVLKALPFE-------SAGFHWSMYWHRRHD 281 Query: 300 HNPKIVWLRETIKNLY 315 P WLRE I+ Sbjct: 282 SVPAQAWLREKIREAA 297 >UniRef50_Q1LM47 Transcriptional regulator, LysR family n=1 Tax=Cupriavidus metallidurans CH34 RepID=Q1LM47_RALME Length = 300 Score = 217 bits (555), Expect = 3e-55, Method: Composition-based stats. Identities = 47/309 (15%), Positives = 93/309 (30%), Gaps = 27/309 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L + + +AAK + + A+S+ + L A LF P G+ + Sbjct: 1 MELRHLRYFACVGEAEHFGRAAKLLKIAQPALSRQIQDLEAELGVALFDRLPRGVRLNAV 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHH-QTPRGLKFELAAESPLM-MIMLNALSKQIYQRYPQ 125 S + ++ N + + + + + +++P Sbjct: 61 GRSFLDDARRILREVNEAKLRVERIAAGQTGTLRVGFGETQAWHGAVPDSLRAFREQHPT 120 Query: 126 ATIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 ++L +DA++ G +D GF L+ P + + + Sbjct: 121 VELELHAMASSRQVDAVSSGNLDAGFIF---------SLTKPPSEFAHRKVARHKLVLAA 171 Query: 185 RKDHPALH-QTWNLDTFLRYPHISICWE--QSDTWALDNVLQELG-RERTIAMSLPEFEQ 240 KDHP + + L P I L G I + + Sbjct: 172 PKDHPIMSLDSVRLRELRDVPFIWFHRWVYPRFHDRLIRACLRDGALAPQIVQQVTDHAT 231 Query: 241 SLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 L + L +A + + L + +PF L+W K NS Sbjct: 232 MLSLV--SCRLGVAFVSE-ATRWQCPAGVALRPVD-------DLNFSLPFYLIWKKNNS- 280 Query: 301 NPKIVWLRE 309 + + E Sbjct: 281 STLLREFLE 289 >UniRef50_C4ZMZ5 Transcriptional regulator, LysR family n=1 Tax=Thauera sp. MZ1T RepID=C4ZMZ5_THASP Length = 310 Score = 217 bits (555), Expect = 3e-55, Method: Composition-based stats. Identities = 44/316 (13%), Positives = 88/316 (27%), Gaps = 24/316 (7%) Query: 7 TLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTP 66 L + L L + +E SV++AA+R+++T +S L +L PLF L T Sbjct: 2 RLTFHQLRLLLAVSREGSVSRAAQRLHLTQPTLSAQLRQLAEQVGLPLFERVGRRLHLTA 61 Query: 67 LMVSMEQNLAEWMQMSNLLLDKPHHQTP-RGLKFELAAESPLMMIMLNALSKQIYQRYPQ 125 + Q L + + LA S + L + P Sbjct: 62 AGRVVLDTANRVEQELERLDETLAELRGDVVGRLRLAVVST-AETFIPRLLGDFRRERPA 120 Query: 126 ATIKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 + L + D + + D+ R + S+ V Sbjct: 121 VEVSLAVLNRDAVIRRLADNLDDLYIMSRPPQAPP----------VVATPFLSNPLVVVA 170 Query: 185 RKDHPAL--HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 HP + ++ + A + G + L E Sbjct: 171 STAHPLAGCRRKLEIEAIAAEEFVLREPGSGTRQAAEQFFAAHGLALRPRLELGSNEAVK 230 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 A L L+ + + + ++ + + L + +++ P Sbjct: 231 QAVAG--GLGLSLLSAHALAHAVDEGIAVLRV-------EGTPLPTQWQVVYPAGKRLTP 281 Query: 303 KIVWLRETIKNLYASM 318 E ++ A + Sbjct: 282 LAGAFLEFLRERAAEL 297 >UniRef50_B7RZD5 LysR substrate binding domain protein n=1 Tax=marine gamma proteobacterium HTCC2148 RepID=B7RZD5_9GAMM Length = 300 Score = 217 bits (555), Expect = 4e-55, Method: Composition-based stats. Identities = 43/311 (13%), Positives = 95/311 (30%), Gaps = 28/311 (9%) Query: 6 TTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPT 65 + +DL L + Q + A+++++ AVS ++ KL LF S ++ T Sbjct: 11 SGVDLRKLEIFAAVAQSGGFSAGAEQLHMAQPAVSIAVRKLEDSLGVTLFDRSSRSIALT 70 Query: 66 PLMVSMEQNLAEWMQMSNLLLDKPHHQ-TPRGLKFELAAESPLMMIMLNALSKQIYQRYP 124 + +Q L + ++ S L L L + Sbjct: 71 AEGEQLLGRAQSILQQVQDLAQSAGDLSDLLRGELSISCPSMLATYFLPDLLSGFLTEHS 130 Query: 125 QATIKLRN-WDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVW 183 T + + + R ++++G + +S ++ L + V Sbjct: 131 GLTASVTQAGTTQIEEMLLRDDIELGVTT-----------TSGTEDLERLPLIKEQMVVC 179 Query: 184 LRKDHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 + ++HP ++ N P + LD + +E E + + + Sbjct: 180 VAENHPWAQRSHLNTQELHNTPMVVYESGYFIRAQLDQLCREAAVEPELRLQSNFLPLLV 239 Query: 243 FMAAQPDNLLLAT-APRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 M Q + + + + +PL +EVP L K + + Sbjct: 240 RMVKQ--GIGVTVGLRTMAEQEPGIAGIPLTP-----------GVEVPMALAKRKGRTIS 286 Query: 302 PKIVWLRETIK 312 + + Sbjct: 287 RANQAFLDWVA 297 >UniRef50_Q89IY7 Transcriptional regulatory protein n=1 Tax=Bradyrhizobium japonicum RepID=Q89IY7_BRAJA Length = 307 Score = 217 bits (555), Expect = 4e-55, Method: Composition-based stats. Identities = 81/320 (25%), Positives = 135/320 (42%), Gaps = 18/320 (5%) Query: 1 MKKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPL 60 M S LDLNLL + LM E SVT+AA + +T AVS +LA+LR DPLFV S Sbjct: 1 MFVSFRALDLNLLKVFEALMTEGSVTRAASALTMTQPAVSNALARLRDALGDPLFVRSGT 60 Query: 61 GLSPTPLMVSMEQNLAEWMQMSNLLLDK-PHHQTPRGLKFELAAESPLMMIMLNALSKQI 119 G+ PT V + + + E ++ LD+ +F L+ + +++ L + Sbjct: 61 GIRPTQRAVVLWEPIGEALESVRGALDEQVFDPARAQTEFSLSMSDYVSSLVMPDLLGHL 120 Query: 120 YQRYPQATIKLRNWD-YDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSD 178 + P+A + + D + VD + P AI L++ Sbjct: 121 GKVAPKARVHTVPNTILEIADQLEDNRVDCVM-------SVYVNEAQQPAAIRSRSLWTV 173 Query: 179 VPCVWLRKDHPALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPE 237 ++R+ HP + + TFL H+ + + D L G R + ++ Sbjct: 174 DYACFMRRGHPLAGMKRLSTRTFLNAGHVDVSLAGKTMPSYDLFLASRGLSRNLVATVNH 233 Query: 238 FEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKR 297 + + + Q D + + P + ++ L L A+PLP + +L WH+R Sbjct: 234 YSAAYEVVRQSDLIAV--LPSDLRSQSRHAPL-LHAMPLPL-----QAPPRIVSLFWHQR 285 Query: 298 NSHNPKIVWLRETIKNLYAS 317 N P WLRET+ ++A Sbjct: 286 NDTVPAQRWLRETLVEMFAR 305 >UniRef50_A7IBY1 Transcriptional regulator, LysR family n=15 Tax=Alphaproteobacteria RepID=A7IBY1_XANP2 Length = 313 Score = 217 bits (555), Expect = 4e-55, Method: Composition-based stats. Identities = 47/311 (15%), Positives = 80/311 (25%), Gaps = 26/311 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 + L L + + VT+ A+ +N+T SA S ++A L A + LF + T Sbjct: 1 MTLEQLRIFVAVAEREHVTQGARDLNLTQSATSAAIAALEARYATKLFDRVGRRIVLTEA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + +AA + L K+ ++P Sbjct: 61 GRLFLSEAKAVLARVHAAEKVLTDLADLTRGSLVIAASQTIANYWLPPFIKRFRSQFPGV 120 Query: 127 TIKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 I L + D I G D+G E S + D + + Sbjct: 121 AITLTIDNTDGVARRINEGLADLGLVEGEIDDPS----------VSVAPFAEDELVLVVP 170 Query: 186 KDHPALHQTWN-LDTFLRYPHISICWEQSDTWALDNVLQELGRERT---IAMSLPEFEQS 241 DH H P + + L + G I++ LP E Sbjct: 171 PDHAWAHDPRRQPAELGVGPWVLREHGSGTRAIFETTLSQFGLAPRDLAISLELPSNEAV 230 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 + + + + F L HK S Sbjct: 231 RSAVEA--GAGVTVVSGLVVSNALKAG--------SLVQVKLDLPKRRFFALRHKEFSMT 280 Query: 302 PKIVWLRETIK 312 + I Sbjct: 281 RAQRAFLDLIA 291 >UniRef50_Q6ANM2 Related to transcriptional regulator n=3 Tax=Desulfobulbaceae RepID=Q6ANM2_DESPS Length = 329 Score = 217 bits (555), Expect = 4e-55, Method: Composition-based stats. Identities = 45/315 (14%), Positives = 95/315 (30%), Gaps = 22/315 (6%) Query: 1 MKKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPL 60 M K ++ + L L + + VTKA+K++ VT SAVS +LA+L LF Sbjct: 1 MYKIMS-ITLRQLEIFIAVAETAQVTKASKKLFVTQSAVSMALAELENQLGGSLFDRHGR 59 Query: 61 GLSPTPLMVSMEQNLAEWMQMSNLLLDKPHH-QTPRGLKFELAAESPLMMIMLNALSKQI 119 L + E + + E+ A + L +L L Sbjct: 60 SLLLNARGRYLLPLAKEISGQISNIEVIMSEKNDTLEGHIEVVASTTLGNYILPYLIGAF 119 Query: 120 YQRYPQATIK-LRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSD 178 + +P+ + L + + + G++D+G+ + F D Sbjct: 120 KRVHPKVQVNMLVYNTRQAKELVRAGKMDVGYVEGPVQAT---------EDLHVRPWFED 170 Query: 179 VPCVWLRKDHPALHQT-WNLD-TFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLP 236 V + P + T +++D I + + + ++ M L Sbjct: 171 ELVVLCGPNDPLANNTAFDVDTDLAGAKWIVREPGSGTAAYFEKKMGKHFENVSVVMELG 230 Query: 237 EFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHK 296 E + ++ C + + L + + ++ ++ K Sbjct: 231 HPEAIKRAVES--GVGISCLSALCICREKENG------WLKSLKIEGVDMKRQLRVVQRK 282 Query: 297 RNSHNPKIVWLRETI 311 + Sbjct: 283 DVVMTDALAEFISFC 297 >UniRef50_A0LA88 Transcriptional regulator, LysR family n=1 Tax=Magnetococcus sp. MC-1 RepID=A0LA88_MAGSM Length = 308 Score = 217 bits (555), Expect = 4e-55, Method: Composition-based stats. Identities = 49/324 (15%), Positives = 100/324 (30%), Gaps = 42/324 (12%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++LN L + + + R +AAK +V+ +S + KL LF S + PT Sbjct: 1 MNLNQLRFIDAVARTRHFGRAAKACHVSQPTLSIGIRKLEEELGVILFERSRSEVRPTEN 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKP-HHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + ++ +N + + + P L + + +L L P Sbjct: 61 SLEILTQARLIVESANHIKELGKSRRDPLQGPLRLGIINTIGPYLLPTLIPHCQAAAPGM 120 Query: 127 TIKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 T+ + D + + G +D+ RE + L+ + V + Sbjct: 121 TLLIEEEHTDTLIAHLKAGTLDLLLIARECAEP----------GLAVTPLYREPFRVTVP 170 Query: 186 KDHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFE----- 239 +HP + + P + + + N+ + P+ + Sbjct: 171 SNHPWANRSSIAGHELDQQPLLLLRRGHCLRDQIINLC--------PTYNTPDSDPNGLS 222 Query: 240 ---------QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPF 290 M A + P HQ L +P + Sbjct: 223 SVLESSSLETIRHMVAG--GAGITVLPSTVADSPFSHQDTLRHIPFA-----EPAPYRTV 275 Query: 291 TLLWHKRNSHNPKIVWLRETIKNL 314 +L+W + S P + L +KN+ Sbjct: 276 SLVWRRTFSRQPAVALLASLVKNM 299 >UniRef50_Q13YH7 Transcriptional regulator, LysR family n=12 Tax=cellular organisms RepID=Q13YH7_BURXL Length = 317 Score = 217 bits (555), Expect = 4e-55, Method: Composition-based stats. Identities = 73/321 (22%), Positives = 133/321 (41%), Gaps = 24/321 (7%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 S+ +DLNLL Q +++ERS+T+A +R+ ++ A+S SL +LR FDDPLF+ + G+ Sbjct: 13 NSLDQVDLNLLRVFQAIVEERSLTRAGERLALSQPAISYSLGRLRTLFDDPLFIRTRAGM 72 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPR--GLKFELAAESPLMMIMLNALSKQIY 120 PTP+ + + +A + L H P F ++ + L + + ++ Sbjct: 73 QPTPIALELSAIVARALDTVREALRYAEHFDPAVSTRTFRVSLSDAGELAYLPPICEALH 132 Query: 121 QRYPQATIKLRNWD-YDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 Q+ P+ +++ + DA+ +D + ++ LF + Sbjct: 133 QQAPRVRLRIEPLPVEEIEDALRASRLDFAIGNLPTLTART----------RHQALFEET 182 Query: 180 PCVWL--RKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPE 237 R+ P + +L FL H+ I + ALD+ + G R IA+ LP Sbjct: 183 YVCMTRKRRGLPRAKE-LSLKAFLDASHVQITSVEHSHRALDDEFRTQGVGRHIALELPH 241 Query: 238 FEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKR 297 F + A D R Q +N+ + LP+ + T+ WH+ Sbjct: 242 FVALPSVLAVTDLFA-TLPRRLAQIFNRGGNFQIYELPVTLPIAA-------VTMHWHEH 293 Query: 298 NSHNPKIVWLRETIKNLYASM 318 + VWLR + ++ Sbjct: 294 FDQDEGNVWLRNLMADIVRHF 314 >UniRef50_B6JAE3 MexT protein n=1 Tax=Oligotropha carboxidovorans OM5 RepID=B6JAE3_OLICO Length = 311 Score = 217 bits (555), Expect = 4e-55, Method: Composition-based stats. Identities = 73/322 (22%), Positives = 140/322 (43%), Gaps = 25/322 (7%) Query: 1 MK-KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSP 59 M K++ LDLNLL+ + RS T AA +++++ AVS +L++LR DPLFV Sbjct: 9 MHQKNLARLDLNLLVVFDAIASARSTTLAATQLSLSQPAVSHALSRLRRLIGDPLFVRGR 68 Query: 60 LGLSPTPLMVSMEQNLAEWMQMSNLLLD-KPHHQTPRGLKFELAAESPLMMIMLNALSKQ 118 TP M + + + ++L P F +AA M+ ++ L + Sbjct: 69 GRFVLTPRAEGMVLQVRDILNAVGVVLANAPFDPAENERTFRIAASDYTMLTIMPTLVRT 128 Query: 119 IYQRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSD 178 +++ P+A +++ + ++ + ++D F + LF + Sbjct: 129 LHRASPRAKLEVFSVGSQTIAQLESNDLDCTFWALKPPGAPY----------VTMPLFRE 178 Query: 179 VPCVWLRKDHPAL----HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMS 234 +L + HP LD ++ YPH+ + S+ +D L +GR+RTI ++ Sbjct: 179 SSKGFLDRRHPLAKPANRGRLTLDDYVGYPHVIAKFRDSNPSPVDVALAAVGRKRTIGLA 238 Query: 235 LPEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLW 294 F ++ + + L+AT P + + L LP+ ++ ++L+W Sbjct: 239 SSSFIGNITALSGTN--LIATLPSRLSSIAESYGLKSFDLPIRIED-------YTYSLVW 289 Query: 295 HKRNSHNPKIVWLRETIKNLYA 316 H+R +P +WLR+ I + Sbjct: 290 HQRTDADPACIWLRKVIAQTIS 311 >UniRef50_D0I933 Putative transcriptional regulatory protein LysR-family n=1 Tax=Grimontia hollisae CIP 101886 RepID=D0I933_VIBHO Length = 307 Score = 217 bits (554), Expect = 4e-55, Method: Composition-based stats. Identities = 46/306 (15%), Positives = 94/306 (30%), Gaps = 19/306 (6%) Query: 9 DLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLM 68 + + V++AA ++V+ SA++ ++ +L + LFV P G+ T Sbjct: 4 TMKQIRYFIATADSGQVSQAANAMHVSQSAITTAVKQLEEMLNVSLFVRQPHGMLLTYEG 63 Query: 69 VSMEQNLAEWMQMSNLL-LDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQAT 127 Q+ ++ L LA L + + + YP Sbjct: 64 NQFYQHATHIVKELEEAMLLSHRRANQVSGTITLAMSYTLAGYFVPPYLTRFQRSYPNVN 123 Query: 128 IKLRNWD-YDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRK 186 +KL + + + GE D+ F I ++ L S +WL Sbjct: 124 VKLVEATRSNIEEGVVSGEFDVAFM--------LTSNLLNQEDISFQTLLSSQRRLWLSS 175 Query: 187 DHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMA 245 HP L + L +YP+I + +++ A + + E + Sbjct: 176 SHPLLERKMVTLHDVAQYPYIMLTVDEASNTA-QRYWNQTPYQPNTVFRTTSVESVRSLV 234 Query: 246 AQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIV 305 A + L + PL + ++W ++ + + Sbjct: 235 AND--YGITILSDMVYRPWSLEGRRVEVRPLA-----DHVPAMDVGVVWSRKRERSSAVK 287 Query: 306 WLRETI 311 E + Sbjct: 288 AFCEFM 293 >UniRef50_B7WRI3 Transcriptional regulator, LysR family n=1 Tax=Comamonas testosteroni KF-1 RepID=B7WRI3_COMTE Length = 307 Score = 217 bits (554), Expect = 4e-55, Method: Composition-based stats. Identities = 53/315 (16%), Positives = 96/315 (30%), Gaps = 23/315 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +DL + L + S +A++R+++ +S S+ KL A LF P G++ T Sbjct: 2 MDLKRIRNFVTLAEAGSFRRASERLHLAQPPLSVSIQKLEAELGTRLFDRGPAGVTLTVA 61 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQ-TPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 S+ + + ++ H + G + ML L +YP Sbjct: 62 GESVLREAKRLLFFERQVITAAHDAISGIGGTLRIGFVGTTTFGMLQRLLPAYRAQYPAV 121 Query: 127 TIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 +KL+ ++ + G +D+G + L S L + L Sbjct: 122 ELKLQEAPSVSIVEQLEHGSLDLGLVRAPVMAATSTTLVS---------LERESLIAALP 172 Query: 186 KDHPALHQT-WNLDTFLRYPHISICWE--QSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 KDH T L+ + S + Q G I + + L Sbjct: 173 KDHFLAKHTAIRLNDLSGEAFLMYAEGAATSLRSLVMAACQRAGFIPRITQEATQVQTIL 232 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 + L +A P + Y + + +L + P Sbjct: 233 ALVES--GLGVALVPSVMRRYASD---VIAYREISDLGHDSWMG---LSLAYMADAEP-P 283 Query: 303 KIVWLRETIKNLYAS 317 V RE A+ Sbjct: 284 AAVKFREVALQTMAT 298 >UniRef50_C3JW42 Transcriptional regulator, LysR family n=4 Tax=Rhodococcus RepID=C3JW42_RHOER Length = 292 Score = 217 bits (554), Expect = 4e-55, Method: Composition-based stats. Identities = 46/312 (14%), Positives = 104/312 (33%), Gaps = 28/312 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L + E +AA+R+++ S +S+++ L LFV + + T Sbjct: 1 MELRQLRAFLAVADELHFGRAAERLHIGQSPLSQTIRALERELGTDLFVRTTRSVQLTAA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQT-PRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 ++ ++ + + + + +L+AL++ + +P Sbjct: 61 GEALVTPARIIEAQIAVVREIASAASTGETGRVTVGFGGTGGYTVLSALTRSLADSHPGI 120 Query: 127 TIKLRNW--DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 ++LR + LDA+ RG +D+G G +P + + + V + Sbjct: 121 ELELRPQMYSGEVLDALRRGALDMGIVGLP-----------IPRGFETHTVREETLMVAV 169 Query: 185 RKDHPA-LHQTWNLDTFLRYPHISIC--WEQSDTWALDNVLQELGRERTIAMSLPEFEQS 241 H H + + + + A +V G T+A P+ Sbjct: 170 PARHHLGAHDSVSPEDLATERFVMYPAEHGSVVRDATLSVCATAGFTPTVAHEAPDPYSL 229 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 L M + +A + + +V LP+ + + W N Sbjct: 230 LAMV--GAGVGIAVVVESTAHLSMDG---VVYLPIA-----GATPTLKIAMAWRPNNP-T 278 Query: 302 PKIVWLRETIKN 313 P + + ++ Sbjct: 279 PAVHTVTRVLRE 290 >UniRef50_Q5LKP3 Transcriptional regulator, LysR family n=1 Tax=Ruegeria pomeroyi RepID=Q5LKP3_SILPO Length = 324 Score = 217 bits (554), Expect = 4e-55, Method: Composition-based stats. Identities = 69/318 (21%), Positives = 129/318 (40%), Gaps = 22/318 (6%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 + LDLNLL+ + + +++ AAKR+NV+ +S +LA+LR DPLF+ S G+ Sbjct: 1 MDLRKLDLNLLVTFEAIYTAGNISHAAKRLNVSQPTISNALARLRDTVGDPLFIRSGRGV 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLL--DKPHHQTPRGLKFELAAESPLMMIMLNALSKQIY 120 +PTP M + + +QM D+ + F + L I++ L + + Sbjct: 61 APTPRATGMIGPVRDALQMIQSGFGDDERFDPSTTRRNFRIVVLDMLEPILMPPLVRAV- 119 Query: 121 QRYPQATIKLRN-WDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 Q Y T+++ D+ + + G +D+ + + I+ E + + Sbjct: 120 QDYRSVTLEMLPVMDFPIAEGLNDGSLDLALTTFDPQ----------HGDIECEQVGAAK 169 Query: 180 PCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFE 239 + RK HP + H+++ + +D VL+ +R I + F Sbjct: 170 IVIVARKGHPRIKGEMTPALVSEIGHVALIPKIRALSRVDEVLRYAKIDRHIVYMVTRFW 229 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 + A D + + + + + L + +P F E ++W KR+ Sbjct: 230 SFPHILANSDLIAM-MPGDFAAHAALFYPLDIFPVPFEFPEQ-------HIYMIWKKRHG 281 Query: 300 HNPKIVWLRETIKNLYAS 317 +P WLRE I Y Sbjct: 282 LDPGHTWLREKIVEAYRE 299 >UniRef50_A5V8P8 Transcriptional regulator, LysR family n=1 Tax=Sphingomonas wittichii RW1 RepID=A5V8P8_SPHWW Length = 316 Score = 217 bits (554), Expect = 4e-55, Method: Composition-based stats. Identities = 78/321 (24%), Positives = 134/321 (41%), Gaps = 14/321 (4%) Query: 1 MKKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPL 60 M S+T DLNLL+ L L+ E+SVT+AA+R+ VT AVS SLA+LR F+DPL V Sbjct: 1 MALSLTQFDLNLLVVLDALLTEKSVTRAAERLFVTQPAVSGSLARLRDIFEDPLLVRVGR 60 Query: 61 GLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGL--KFELAAESPLMMIMLNALSKQ 118 + T ++ + E + M L P +F +A M +L + ++ Sbjct: 61 EMELTVRARALAGPVREALLMVKAALGSEESFDPAETKCEFRIAMTDYCSMTILPRIVRE 120 Query: 119 IYQRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSD 178 + R P + + S D + GE+D + R+ + S P + F D Sbjct: 121 LSARAPGIELAVEGLVNKSFDRLETGEIDFLLT---VVERTLLMHSRHPDMLRGADAFED 177 Query: 179 VPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEF 238 + DHP + F YP+ ++ + ++ + G +++ A+ P F Sbjct: 178 CYTCVVAADHPF-DGALTPEDFRAYPNATVSFGENTFTTDRAAYEHGGLDQSPALIAPSF 236 Query: 239 EQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRN 298 LF + R + + + + L+ P+ ++ L WH R+ Sbjct: 237 SSLLFQLQGTTLIG-TVPNRLAEMFAPMLGVRLLEPPIRLPTLTER-------LNWHVRS 288 Query: 299 SHNPKIVWLRETIKNLYASMA 319 +P W+R I ++ SM Sbjct: 289 DADPGHSWMRNLILDVGRSMG 309 >UniRef50_C8W2X0 Transcriptional regulator, LysR family n=1 Tax=Desulfotomaculum acetoxidans DSM 771 RepID=C8W2X0_DESAS Length = 305 Score = 217 bits (554), Expect = 4e-55, Method: Composition-based stats. Identities = 39/312 (12%), Positives = 88/312 (28%), Gaps = 23/312 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +++ L + + ++ TKAA + ++ AVS + L LF S ++ T Sbjct: 1 MNIKQLEAFLQVARHKNFTKAAVHLMMSQPAVSFQIKSLEEDLQINLFERSEKKVALTEA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + ++ + + +L A I+L L ++YP Sbjct: 61 GRLLYPVAMQMVRQYHKIRASLDDLRNLKTGHLQLGACPAAGEILLPRLIGAFREQYPGV 120 Query: 127 TIKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 I L+ + + +V +G ++ + D Sbjct: 121 KISLQVGGSSQVNRWLKERDVVMGILSIPVQI----------DGVEGQPWLRDHLAFIAP 170 Query: 186 KDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTI---AMSLPEFEQSL 242 HP + LR + + EL + L + + Sbjct: 171 TWHPWNGAEVKPNDLLRESLVIRETGSGSRQVAEQQFLELNLSLEQFAGILELGSNQSII 230 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 + L + + + + + +P E L W++ + Sbjct: 231 NAVRAGLGIGL-VSSWTVRDDIARNNIGVFTVP-------GLTFEYNLYLAWNQPGAEGL 282 Query: 303 KIVWLRETIKNL 314 + R + N Sbjct: 283 AVSTFRRFLLNH 294 >UniRef50_A1SEX2 LysR, substrate-binding n=11 Tax=Actinomycetales RepID=A1SEX2_NOCSJ Length = 330 Score = 217 bits (554), Expect = 4e-55, Method: Composition-based stats. Identities = 37/299 (12%), Positives = 84/299 (28%), Gaps = 26/299 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L + + +AA+R+ + A+S+++ L + LF + ++ TP Sbjct: 25 MELRHLRYFTAVAETCHFGQAAERLLIAQPALSQAIRSLESELGVTLFTRTTRHVALTPA 84 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQ-TPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + R L L L + + + P+ Sbjct: 85 GEYFFDESRRILAAVEDSTRGVRQLADGRHGLVRLGLVGTAATSHLPHLVRTLKRELPEV 144 Query: 127 TIKLRN--WDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 + ++ + D + G +D+ + I+ V+ + + L Sbjct: 145 AVDVKADILTPELCDLLRAGAIDVAVLRPPV----------VGEGIEIHVVEEEPLILAL 194 Query: 185 RKDHPALHQT-WNLDTFLRYPHISICW-EQSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 + H + ++ P IS E + A+ + + P L Sbjct: 195 PESHALAARGDLGVEDLRNEPFISYAAQESAVNQAVLRACRTADFVPHRSHEAPGTAVLL 254 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 + A L ++ P + + L + L W Sbjct: 255 SLVAA--GLGVSLVPASVRAF---------PLTGVVFREVLDAGTIQLALAWRSDRPRP 302 >UniRef50_C8W3M6 Transcriptional regulator, LysR family n=1 Tax=Desulfotomaculum acetoxidans DSM 771 RepID=C8W3M6_DESAS Length = 293 Score = 217 bits (554), Expect = 4e-55, Method: Composition-based stats. Identities = 36/311 (11%), Positives = 94/311 (30%), Gaps = 23/311 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +++ L + ++ S T+AA+ ++ S+++ ++ L + LF ++ T Sbjct: 1 MEIRQLKAFVTVAKQHSFTRAAELLDYAQSSITAQVSALENKLNTKLFERLGRQVTLTQN 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQAT 127 + + +++++ ++ + A + L L ++ + +P Sbjct: 61 GEKLLPYAEKILKLNSEAIELVSSSPVPRGSLSVGAMETSCIYRLPKLLQEYRKLFPNVD 120 Query: 128 IKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRK 186 + L N + + ++ ++D+ F + E L + + Sbjct: 121 LTLVNGYPEELIHSLKENKIDVAF---------FTGQEITNPDLVSETLLDEPIVLVSAA 171 Query: 187 DHPALHQT--WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 HP + L + L + + G + + E Sbjct: 172 GHPLSKKAPVITL-DLQGETIVLCS--CCYRATLRKIFENKGIQVGSILKFANIEVRKRC 228 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 + L + PR LV L + + +HK +P + Sbjct: 229 VI--NGLGITILPRVTVEAELNQG-TLVDL-----GWNSSDFNIITQVAYHKDKWVSPVL 280 Query: 305 VWLRETIKNLY 315 E + Sbjct: 281 RSFLELAHEII 291 >UniRef50_A4FAR0 Transcriptional regulator n=4 Tax=Actinomycetales RepID=A4FAR0_SACEN Length = 307 Score = 217 bits (554), Expect = 5e-55, Method: Composition-based stats. Identities = 40/315 (12%), Positives = 94/315 (29%), Gaps = 25/315 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +DL L +++ + +++AA + V+ ++S+++A+L PLF + Sbjct: 1 MDLLPLRYFRVVARHEHISRAATELRVSQPSLSRTIARLETELGVPLFDRRGRHVRLNRF 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNALSKQIYQRYPQA 126 ++ + + + + +A E+ L L +P Sbjct: 61 GATLLRRVERALDELEQGRRELADAAGLAHGSVAVATETLLT---LVEPLTGFRNDHPGV 117 Query: 127 TIKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 ++L D L+ + RGEVD+ + + ++ + + + Sbjct: 118 DVRLHQSSVDGLLERLRRGEVDLCLMSQPVDDPA----------LESAEVLHEEVLLATP 167 Query: 186 KDHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 H + + P I+ D + G TI E + ++ Sbjct: 168 LGHRLATRERIGMGDLDGEPFITTRPGYWQRVLTDRLFAAAGSRPTIVCEADEPGATAYL 227 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 + + P + + L + L T +W + + Sbjct: 228 ISSGLGVG--LLPATARRFAPHAPLAWLHLD-------APDCHRTLTFVWRRDAYVSLAA 278 Query: 305 VWLRETIKNLYASMA 319 R + A Sbjct: 279 QEFRAHVTATVRRAA 293 >UniRef50_A3QJ07 Transcriptional regulator, LysR family n=25 Tax=Alteromonadales RepID=A3QJ07_SHELP Length = 330 Score = 217 bits (554), Expect = 5e-55, Method: Composition-based stats. Identities = 95/319 (29%), Positives = 160/319 (50%), Gaps = 13/319 (4%) Query: 4 SITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLS 63 ++ +DLNLL+ LQ+L++ERSVT+AA R++++ SA+SKSL +LR DPLF+ + GL Sbjct: 5 NLARIDLNLLVMLQVLLEERSVTRAASRLHLSQSALSKSLNRLRDTLGDPLFIRTAHGLK 64 Query: 64 PTPLMVSMEQNLAEWMQMSNLLLDKP-HHQTPRGLKFELAAESPLMMIMLNALSKQIYQR 122 PT + Q L + +Q L P + +F A ++ + Sbjct: 65 PTAHAALLGQQLPDMLQGLYQLTQPPSFNPASSRRQFSFAMVESAYETLIPYFIGPLLNN 124 Query: 123 YPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCV 182 P + W SL ++ +G++D G +GR+ +P+S ++ LP I ++ LF+D Sbjct: 125 APNLRLDSYLWTEKSLSSLQKGQIDFGITGRDINPQSDLIIDRLPEGIAHQTLFTDHQVC 184 Query: 183 WLRKDHPALHQ----TWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEF 238 +R+ HP L W+LD +L H+ + E ++ WALD L + G+ R ++ ++P+F Sbjct: 185 LVRQGHPMLPAIRNHQWDLDIYLEMSHVQVRCEGNEWWALDYFLAKSGQRRHLSTTVPDF 244 Query: 239 EQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRN 298 + + A D + + + +L+ L + LP F + LLWH+RN Sbjct: 245 YGAASVCAHSDLI-FTLPSSFAAHARKLYALEELPLPFDFHSLA-------YVLLWHERN 296 Query: 299 SHNPKIVWLRETIKNLYAS 317 P W+RETI A Sbjct: 297 DDEPGHKWIRETICKRVAQ 315 >UniRef50_A1SFE6 Transcriptional regulator, LysR family n=3 Tax=Actinomycetales RepID=A1SFE6_NOCSJ Length = 305 Score = 217 bits (554), Expect = 5e-55, Method: Composition-based stats. Identities = 38/318 (11%), Positives = 93/318 (29%), Gaps = 27/318 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L + L +ER +AA R++V A+S+ + +L LF + + T Sbjct: 1 MELRHVRYALALAEERHFGRAAARVHVAQPALSQQVKQLERELGVELFRRTTRRVELTEA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQT-PRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 ++ + + + R + + +L ++ ++++ P Sbjct: 61 GRRFAEHARGILAGVDRAREDLALLASGRAGRVSVGFVGTATYDVLPRVAHEVHRALPDV 120 Query: 127 TIKLR--NWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 ++LR + L + D+ + + L ++ + Sbjct: 121 DLQLRGESLSPRLLAGLADHTFDLALLRPDPLGG---------DGLVVRTLRAEPLVAVV 171 Query: 185 RKDHPALH-QTWNLDTFLRYPHISIC--WEQSDTWALDNVLQELGRERTIAMSLPEFEQS 241 HP + +L + S + + G T + + E Sbjct: 172 PTGHPLAGQRRIDLAELAGESFVVHPSAHRSSIHERVLQACADAGFVPTSLLEVAETATM 231 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 + A L +A P + + L + L + + Sbjct: 232 VVFVAA--GLGVALVPE---------PVRSLGLEGVSYVGLTDPPTIDLALAGRRD-ESS 279 Query: 302 PKIVWLRETIKNLYASMA 319 P + + I+ + A Sbjct: 280 PAVRNVAVIIERIVTGAA 297 >UniRef50_Q2BMZ3 Putative transcriptional regulator, LysR family protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BMZ3_9GAMM Length = 303 Score = 217 bits (553), Expect = 5e-55, Method: Composition-based stats. Identities = 55/297 (18%), Positives = 109/297 (36%), Gaps = 18/297 (6%) Query: 21 QERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSMEQNLAEWMQ 80 +ER VT+AA+R+++T SA+S+ L++LR F DPL + + + + + Sbjct: 17 EERHVTRAAERLHLTQSALSRQLSQLREHFSDPLLIREGNEYLLSARAKQLLPKIQAILT 76 Query: 81 MSNLL-LDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQATIKLRNWDYDSLD 139 + L +F A + + + ++ P I W + L Sbjct: 77 EVDELSEGDSFDPLQCRRRFSFACTDHVAQFIFPEILGRLRDEAPGIDITFEMWRPEWLG 136 Query: 140 AITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPALHQTWNLDT 199 + + +DI ++LP + + D P + ++HP +++ Sbjct: 137 RLGQLPLDIA----------STTTANLPENVRSIHIGQDSPVCLMAENHPLAACELSIEK 186 Query: 200 FLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQPDNLLLATAPRY 259 L YP + + D L+ +G +R I +P F + L++ Sbjct: 187 MLEYPFLRLNSGGDKDSFFDKALESMGLQRRIQYEVPFFSAAFQALEGSSLLMI-LPHHI 245 Query: 260 CQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWLRETIKNLYA 316 + L + LPL + + WH+ + +P WLR+ I + Sbjct: 246 AMNALEHFPLAVAQLPLAEVPKN------QYHMCWHEVHDQDPAHSWLRQLIAEVLR 296 >UniRef50_D0IZT6 Transcriptional regulator, LysR family n=5 Tax=Comamonadaceae RepID=D0IZT6_COMTE Length = 316 Score = 217 bits (553), Expect = 6e-55, Method: Composition-based stats. Identities = 44/315 (13%), Positives = 98/315 (31%), Gaps = 26/315 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 + +LL +L +E +AA+R+ +T +S +L L L + TP Sbjct: 13 MKTHLLRYFVVLAEELHFGRAAQRLCITQPPLSMALKALEQDLGTVLMERDAKNVKLTPA 72 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHH-QTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + + + + ++ ++ + + P Sbjct: 73 GEAFLHEARKVLAQLQHAAEVVRGVAQGLQGRLDIGITGSMVYRQVPGFCRAFRAERPLV 132 Query: 127 TIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + L D L AI RG++D GF + + I + + L Sbjct: 133 ELCLHEMSTRDQLQAIARGQIDCGFL----------NIGTPQDDIRTLSIGEEAFVCCLP 182 Query: 186 KDHPALHQ-TWNLDTFLRYPHISICWE--QSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 DH + +L + + E ++ + LQ+ G + ++ + Sbjct: 183 SDHALARRAELDLRELAQDTFVMFAREVAPANYDNVIACLQQAGIHPHTRHAARQWLTVM 242 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 + + +A P Q + F + ++ P L W R + Sbjct: 243 ALVSAGQG--VALVPACMQTVGMNG--------VCFAALRGSRVTTPAVLAWRPRG-MSA 291 Query: 303 KIVWLRETIKNLYAS 317 + +++NL + Sbjct: 292 VLEAFVASVQNLVQA 306 >UniRef50_A4JSC2 Transcriptional regulator, LysR family n=4 Tax=Burkholderia RepID=A4JSC2_BURVG Length = 303 Score = 217 bits (553), Expect = 6e-55, Method: Composition-based stats. Identities = 45/318 (14%), Positives = 94/318 (29%), Gaps = 27/318 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++ L + + T+AA+ + + +S+ + KL LF+ P + T Sbjct: 1 MEFRQLRYFLAVAEYLHFTEAAEFLGIAQPPLSQQILKLEREIGTRLFIRHPRRVELTDA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQ-TPRGLKFELAAESPLMMI-MLNALSKQIYQRYPQ 125 + ++ + L L + + + L ++ + +L ++ + YP Sbjct: 61 GRLFRERAKHIVEEAELALAEAQNAGRGLSGRLVLGFAGSIVFHPFVASLMQRFRRDYPD 120 Query: 126 ATIKLRN-WDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 I +D + VD R + + L + L Sbjct: 121 VLIHCEESNSPALIDKVLEARVDAALVRLPLDCR----------GLAVQPLVEERFLAVL 170 Query: 185 RKDHPALHQTW-NLDTFLRYPHISICW--EQSDTWALDNVLQELGRERTIAMSLPEFEQS 241 H + L P + + A+ G T+ M P+ S Sbjct: 171 PSGHRHGAEPVLALHALSDDPLVLFPRAIGPALYDAIVGACWAAGFTPTVEMESPQIPAS 230 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 + + A + P + + + Q + L P L+ R + Sbjct: 231 VNLVAA--GFGVTLIPESVRQAPTDR--------VTYHGLQGEPLRSPIVLVHRPR-EKS 279 Query: 302 PKIVWLRETIKNLYASMA 319 P I L ++ L A Sbjct: 280 PVIQNLVRAVRTLARETA 297 >UniRef50_A5FXN6 Transcriptional regulator, LysR family n=6 Tax=Alphaproteobacteria RepID=A5FXN6_ACICJ Length = 306 Score = 217 bits (553), Expect = 6e-55, Method: Composition-based stats. Identities = 45/314 (14%), Positives = 94/314 (29%), Gaps = 26/314 (8%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 T ++L L + + S T+AA+R+ ++ +S+ + L L S + Sbjct: 1 MDRTGMELRHLRYFVAVAETLSFTEAARRLAISQPPLSQQIRDLELEIGTTLIARSSRNV 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQ-TPRGLKFELAAESPLMMIMLNALSKQIYQ 121 S TP + + + + D+ R ++ +++ L L Sbjct: 61 SLTPAGAAFLTRARQILAEAVRARDEARVIGAGRSGTLDIGMTGAVLLGGLGGLVAAFQI 120 Query: 122 RYPQATIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 P ++L + A+ G +D+ F + + E + + Sbjct: 121 FAPGVQVRLHEMPPGEQEAALGAGRLDLCFLRTPGADPA----------LRVEPAWHEGV 170 Query: 181 CVWLRKDHPAL-HQTWNLDTFLRYPHISICW-EQSDTWALDNVLQELGRERTIAMSLPEF 238 L +DHP + L P + + L E G I + E Sbjct: 171 SAVLPRDHPLAVRRRLALADLRDEPFVFFRRADSRFADHLWTCCIEAGFAPRIVQEVVEA 230 Query: 239 EQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRN 298 + + A D +A P + L F +L++ + Sbjct: 231 HAVMALVA--DGFGIALLPDSARRLAPSG--------LGFRPLAGNPARADVSLVYPR-- 278 Query: 299 SHNPKIVWLRETIK 312 H+ + + Sbjct: 279 EHSAVVGEFIGFAR 292 >UniRef50_B8FZV1 Transcriptional regulator, LysR family n=2 Tax=Desulfitobacterium hafniense RepID=B8FZV1_DESHD Length = 301 Score = 217 bits (553), Expect = 6e-55, Method: Composition-based stats. Identities = 49/319 (15%), Positives = 104/319 (32%), Gaps = 25/319 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +D + + + R+ ++A K + +T +S ++ L + LF S + PT Sbjct: 1 MDFRQIEAFVSVYRLRNFSRAGKALFLTQPTISSHISDLETELEVKLFDRSSREVMPTGA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKP-HHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 Q ++ + + H + E+AA + +L L + P Sbjct: 61 GDIFYQYAVNLLETRDCAISSLNQHNRQIEGRLEIAASTIPCQYLLPKLMIGFQKINPNI 120 Query: 127 TIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + D + + + +G G + +DYE+L D + Sbjct: 121 RFLIHQGDTNQVIKKVREKKYQVGIVGTRTDEDK----------LDYEILTKDRLVLIAA 170 Query: 186 KDHPALHQT--WNLDTFLRYPHISICWEQSDTWALDNVLQELGRER---TIAMSLPEFEQ 240 +D+ + +++ L+ I + L+E G + + + E Sbjct: 171 RDYIEAADSPCIAVESLLKKQFILRERGSGTRDTFETALKEKGIDPDTLKVVAEMNNTEA 230 Query: 241 SLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 + L +A L + +LE F L+ ++ Sbjct: 231 IKHAV--SEGLGVAVVSSLSV------GNELKSEAFQAFSIDGLELERSFYLVTYRNQPL 282 Query: 301 NPKIVWLRETIKNLYASMA 319 +P + RE I N Y++ A Sbjct: 283 SPSVAAFREFILNYYSNHA 301 >UniRef50_C6HUD2 Transcriptional regulator, LysR family n=1 Tax=Leptospirillum ferrodiazotrophum RepID=C6HUD2_9BACT Length = 295 Score = 217 bits (553), Expect = 6e-55, Method: Composition-based stats. Identities = 44/314 (14%), Positives = 91/314 (28%), Gaps = 29/314 (9%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 + + L L L + + T+ +++ +T SAVS +LA LF G+ T Sbjct: 1 MTIIQLRVLLALKELGNFTEVGEKLGITQSAVSHALASFEKEIGITLFNRDRKGVVLTEG 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + ++ E + + ++ + K + + ++ L + Q+YP Sbjct: 61 GQRIIDHVREIVGRVERIKEEASSLSGLKIGKISVGTLQSAAIRIIPGLMGVMRQKYPGI 120 Query: 127 TIKLRNWDYDSLD-AITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 I + + I VD+G ++ L +D + Sbjct: 121 EISVFEGTDQEVQDWIHSETVDLGILTAPC------------QNLETIPLLTDRMFGIVP 168 Query: 186 KDHPALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTI-AMSLPEFEQSLF 243 +DHP +T +LD P I + + + G + Sbjct: 169 EDHPLAGCKTLSLDQLSSEPIIRALGNCGM--IVASRFSQAGLSPGFKTIEARNISTISA 226 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 M + + +P+ L L K + +P Sbjct: 227 MVRSGAGSAI-----LAGLAVPRDTTGIRVIPIE------PPLFRQIVLAAPKLQALSPA 275 Query: 304 IVWLRETIKNLYAS 317 + + A Sbjct: 276 ARVFVDLTREWMAG 289 >UniRef50_B7WQP0 Transcriptional regulator, LysR family n=1 Tax=Comamonas testosteroni KF-1 RepID=B7WQP0_COMTE Length = 295 Score = 217 bits (553), Expect = 6e-55, Method: Composition-based stats. Identities = 67/310 (21%), Positives = 124/310 (40%), Gaps = 20/310 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +D+ LL + + RSV++A + + + ++VS +L +LR F+D LFV + G+ PTP Sbjct: 1 MDMKLLSVFDEIYKTRSVSRAGENLGLAQTSVSLALGRLRRAFNDQLFVRTSEGMLPTPR 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPR--GLKFELAAESPLMMIMLNALSKQIYQRYPQ 125 ++ L + +++ + P F LA + L AL ++ P+ Sbjct: 61 AAALVPQLRQALELLQSATRQQAEFDPASSSRAFRLAMTDISHLEFLPALMNKLGNIAPK 120 Query: 126 ATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 +++ D+ + G+ D+ L + LF D +R Sbjct: 121 VRVEVLRITADTARLLEAGDADLAIGYMP----------ELDAGFYQQKLFRDGFACVVR 170 Query: 186 KDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMA 245 + HP + + F H+ I + ++ L+ G +R +A+SLP + Sbjct: 171 RTHPRIDDNLTMTRFKTERHVIITAPGTGNEIVEQELKRQGAQRNVALSLPTLPGVGNLL 230 Query: 246 AQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIV 305 A D + R Q ++ Q+ +A P E WH+R +P Sbjct: 231 AHTDLIA-TVPHRIAQTLVKIAQVKAIASPYRLP-------EFAIKQHWHERYQQDPANR 282 Query: 306 WLRETIKNLY 315 WLR T+ L+ Sbjct: 283 WLRSTLAELF 292 >UniRef50_UPI00004DBCAD UPI00004DBCAD related cluster n=2 Tax=Xenopus (Silurana) tropicalis RepID=UPI00004DBCAD Length = 312 Score = 217 bits (553), Expect = 6e-55, Method: Composition-based stats. Identities = 52/310 (16%), Positives = 92/310 (29%), Gaps = 22/310 (7%) Query: 7 TLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTP 66 L L L + S +AA R+ + A+S+ + + LF +S T Sbjct: 2 DLSLQQLEAFVQVAAAGSFRQAALRLGQSQPALSRFIRQAEQTLGARLFDRDTRHVSITD 61 Query: 67 LMVSMEQNLAEWMQMSNLLLDKPHHQ-TPRGLKFELAAESPLMMIMLNALSKQIYQRYPQ 125 + ++ + L + +AA + +L + + Q Sbjct: 62 AGKELLPIAQRVLRDFDDALGDFGEFMAGHSGRIVVAALPSTSIALLPQALAAFSRTHSQ 121 Query: 126 ATIKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 T L + L + G D G S R + + Y LF D + Sbjct: 122 VTFALTEAPAEVLLALVEEGRADFGISVRPAPR----------QRLQYRHLFDDPFVLVC 171 Query: 185 RKDHPA-LHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 R+D P ++ F P I S D V + P Sbjct: 172 RRDDPLAARESVPWSAFSTRPCIVAGSRSSIRPVTDAVFLRQRMPVHPVLEYPSVASCGA 231 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 + A + + P + + LVALPL Q+ + P ++ S +P Sbjct: 232 LVAA--GVGITALPMLALELLNM--VELVALPL-----QRPLMSRPIGIVTRIGRSLSPV 282 Query: 304 IVWLRETIKN 313 ++ Sbjct: 283 SKAFMASLTQ 292 >UniRef50_C7RPQ0 Transcriptional regulator, LysR family n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RPQ0_9PROT Length = 303 Score = 217 bits (553), Expect = 6e-55, Method: Composition-based stats. Identities = 43/314 (13%), Positives = 94/314 (29%), Gaps = 22/314 (7%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 + + L + S +AA+++++T +A+S + +L LF + Sbjct: 1 MRNATIRQLQIFSVAASHLSFARAAEKLHLTHAAISLQIKQLEDVSGALLFERIGKRVFL 60 Query: 65 TPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELA-AESPLMMIMLNALSKQIYQRY 123 T + + + +Q + +A A + L + + Sbjct: 61 TEAGEILLDHTRQILQSLKEADEALLALKGLRGG-RIAVAVASTAEYFAPGLLAEFRKVQ 119 Query: 124 PQATIKLRNWDYDSLDAITRG-EVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCV 182 I+L + D++ + G EVD+ GR ++ P + Sbjct: 120 ADVRIRLLIDNRDTVTRLLVGNEVDLAIMGRPPAELDATAVAFAPH----------PLVI 169 Query: 183 WLRKDHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQS 241 HP Q ++ I A++ QE + I M + E Sbjct: 170 VASAAHPLAGQANVAVEDLAGETLIVRETGSGTRSAMEEFFQERSIKPRIGMEMGSNEAI 229 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 L ++ ++ L L A L + + + + ++ HK Sbjct: 230 KQAVVA--GLGISFISQH------TLGLELSAARLVILKVEGTPVIRRWHIVRHKNKHLT 281 Query: 302 PKIVWLRETIKNLY 315 P + + + Sbjct: 282 PALGAFWDFVLEFA 295 >UniRef50_A8S8P4 Putative uncharacterized protein n=2 Tax=Ruminococcaceae RepID=A8S8P4_9FIRM Length = 298 Score = 217 bits (553), Expect = 7e-55, Method: Composition-based stats. Identities = 48/304 (15%), Positives = 100/304 (32%), Gaps = 27/304 (8%) Query: 14 LCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSMEQ 73 + + S +KAA+ +N T S +S+ +A L LF G++ T + Sbjct: 9 EIFLKVCETGSFSKAAEALNYTQSGISQMMAGLEEELGVQLFARINRGVTLTDNGTRLLP 68 Query: 74 NLAEWMQMSNLLLDKPHHQTP-RGLKFELAAESPLMMIMLNALSKQIYQRYPQATIKLRN 132 + E L + K + + S + + + + + YP+ I++ + Sbjct: 69 YIRELANQKTRLRQAAFNINHKVEGKLRVGSISSITTLWMPEVVHYFKENYPKVKIEILD 128 Query: 133 WDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPAL 191 +YD + + I RG+VD GF + + L D C + HP Sbjct: 129 GNYDEIREWIIRGQVDCGFLSSIVAD-----------DLKFYPLRDDPLCAVFPEGHPLA 177 Query: 192 HQ-TWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQPDN 250 + + L +YP I + + +++ + + I S + + Sbjct: 178 ERSSVTLPQLFQYPLIIETPGCDND--IQHLMLKCPVKPNIFYSFRDDTLIMAFVRS--G 233 Query: 251 LLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWLRET 310 L + + + L + L + K S + L E Sbjct: 234 LGVTISQELVMQAFGCPGVVSRPL--------EPACCRTLGLAFSKTAS-SVVSQTLLEY 284 Query: 311 IKNL 314 +++ Sbjct: 285 LRST 288 >UniRef50_Q73ZG9 Putative uncharacterized protein n=2 Tax=Mycobacterium avium RepID=Q73ZG9_MYCPA Length = 305 Score = 216 bits (552), Expect = 7e-55, Method: Composition-based stats. Identities = 47/312 (15%), Positives = 95/312 (30%), Gaps = 26/312 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +DL+ L C + +E + T AA+RI++ S VS + L LF P + T Sbjct: 1 MDLHQLECFIAVAEEGTFTAAAQRIHLAQSGVSAHIKALEREIGQQLFERRPRTVRLTAA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTP-RGLKFELAAESPLMMI--MLNALSKQIYQRYP 124 ++ + T + + + + L L + +P Sbjct: 61 GNALLPYARAALDALAAGRASIDGLTGLLHGRLAIGTITSISPRSIDLPELLAAFHHEHP 120 Query: 125 QATIKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVW 183 + L L I+ G +D+ F+ + + L + Sbjct: 121 GVDLSLVEDTAAMLNRHISNGALDVAFTSLTDEAVA---------GVRMRELHREPVIAI 171 Query: 184 LRKDHPALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 P + L P I++ W L+ L+ G + IA + + + Sbjct: 172 FLPSDPLSPCRKLTLADVADRPLITLPEGSGLRWQLNRALRRAGVQAHIAFEAGDPDVLV 231 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 + A+ + L Q + ++ LP+ ++W + + +P Sbjct: 232 ALVAKGLGVGLVPQSALAQSDH------VIGLPVSDHPPG------RLGIIWPEGQAASP 279 Query: 303 KIVWLRETIKNL 314 E Sbjct: 280 AARAFVEHATTA 291 >UniRef50_A9AT14 LysR family transcriptional regulator n=11 Tax=Burkholderia cepacia complex RepID=A9AT14_BURM1 Length = 300 Score = 216 bits (552), Expect = 7e-55, Method: Composition-based stats. Identities = 40/308 (12%), Positives = 101/308 (32%), Gaps = 19/308 (6%) Query: 13 LLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSME 72 L + + + +AA+++++T +S+ + KL LF + ++ T + Sbjct: 8 LEAFVAVAELGTFHRAAEKLHLTQPGLSRRIQKLEQALGVELFQRTTRSVTLTGVGRQFL 67 Query: 73 QNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNALSKQIYQRYPQATIKLR 131 E + ++L + K +++ ++ +L + Q ++YP +++ Sbjct: 68 PMAREQIAQLGMMLSSIQEIAEKRYGKVRVSSIPTVVAQLLPKVLLQYAEKYPLIGVQIL 127 Query: 132 NWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPA 190 + ++D L + G + G S + +E LF D + + +D P Sbjct: 128 DGNHDFVLSQVRAGIAEFGVSLHPGD----------DEDLLFEPLFPDRYVLAVHRDDPL 177 Query: 191 LH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQPD 249 L + + + L+ ++ + + + A Sbjct: 178 AQADGVTLAELRHARLVIGGRDSGNRLLLEMLMGQEAVRLRWFYEVEHISCVAALVAA-- 235 Query: 250 NLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWLRE 309 + A PR + L + + + ++ H+ S + L Sbjct: 236 GVGCAILPRSAVDGVGM----LASPDVRAVPITSPVISRTVGIVRHRAVSMSSMASDLCA 291 Query: 310 TIKNLYAS 317 +K A Sbjct: 292 LVKAAAAR 299 >UniRef50_Q47P44 Putative LysR-family transcriptional regulator n=1 Tax=Thermobifida fusca YX RepID=Q47P44_THEFY Length = 301 Score = 216 bits (552), Expect = 7e-55, Method: Composition-based stats. Identities = 56/313 (17%), Positives = 102/313 (32%), Gaps = 19/313 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 LD N L L + + S+T AA+R++ TP A+S+ LAKL L G+ T Sbjct: 2 LDANRLRVLVEVARAGSITAAAERLSFTPPALSQQLAKLERELGCALLERGRNGVRLTEA 61 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHH-QTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + + L A + +L + + + +P Sbjct: 62 GRVLLDHGERVLGELREAERAVRATLGQHPSTLSLGAFASAGTTLLPSALAEFRRAHPHV 121 Query: 127 TIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + L + D +T G++D+ + + E L +D + L Sbjct: 122 RLALSDVEPPDGYGLVTSGDLDLLITHCYPGTELPSAT-----GLRRERLLTDPLMLVLP 176 Query: 186 KDHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 HPA+ + L I + AL+ E G E T+A ++E +L + Sbjct: 177 DGHPAIDKPRITLADLADEEWICGAPGIHNRIALETAAAEAGVEVTVAYETRDYEVTLAL 236 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 + P + HQ L L L++ R + Sbjct: 237 IRAGVGIG--LVPATILRTHPEHQWHAHQL-------SGTDLARTIFLVYRPR--LPEPV 285 Query: 305 VWLRETIKNLYAS 317 + T+++ Sbjct: 286 AAMAATLRDAARR 298 >UniRef50_P10183 HTH-type transcriptional activator nahR n=67 Tax=Bacteria RepID=NAHR_PSEPU Length = 300 Score = 216 bits (552), Expect = 8e-55, Method: Composition-based stats. Identities = 69/316 (21%), Positives = 118/316 (37%), Gaps = 21/316 (6%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 + LDLNLL+ L+ +R V+ A+ + +T AVS +L +LR DPLFV + G+ Sbjct: 1 MELRDLDLNLLVVFNQLLVDRRVSITAENLGLTQPAVSNALKRLRTSLQDPLFVRTHQGM 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQIY 120 PTP + + + M L P F LA + + L + Sbjct: 61 EPTPYAAHLAEPVTSAMHALRNALQHHESFDPLTSERTFTLAMTDIGEIYFMPRLMDVLA 120 Query: 121 QRYPQATIK-LRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 + P I +R+ + A+ G VD+ +L L + Sbjct: 121 HQAPNCVISTVRDSSMSLMQALQNGTVDLAVGLLP----------NLQTGFFQRRLLQNH 170 Query: 180 PCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFE 239 RKDHP + L+ F Y H+ + + +D + +G R I + +P F Sbjct: 171 YVCLCRKDHPVTREPLTLERFCSYGHVRVIAAGTGHGEVDTYMTRVGIRRDIRLEVPHFA 230 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 + + D L R + L + P+ E + WH + Sbjct: 231 AVGHILQRTDLLA-TVPIRLADCCVEPFGLSALPHPVVLPEIA-------INMFWHAKYH 282 Query: 300 HNPKIVWLRETIKNLY 315 + +WLR+ + +L+ Sbjct: 283 KDLANIWLRQLMFDLF 298 >UniRef50_A1UXD8 Transcriptional regulator, LysR family n=41 Tax=cellular organisms RepID=A1UXD8_BURMS Length = 355 Score = 216 bits (552), Expect = 8e-55, Method: Composition-based stats. Identities = 65/299 (21%), Positives = 124/299 (41%), Gaps = 20/299 (6%) Query: 15 CLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSMEQN 74 LMQE+++++AA R++++ AVS +L +LR +PLF + G++PT ++ + Sbjct: 59 VFDALMQEQNLSRAAIRLHMSQPAVSNALTRLRQQLGEPLFTRTARGMTPTAQARTLYEP 118 Query: 75 LAEWMQMSNLLLDKPHHQTPRGLK-FELAAESPLMMIMLNALSKQIYQRYPQATIKLRNW 133 + + + + + L P F+L+ ++L L I R P + +++ Sbjct: 119 VRQALYLLQIGLGPQADFEPDTHHLFKLSMNDYGQTVLLPDLLAHIKSRAPNVMLSVQSD 178 Query: 134 DYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPALH 192 D S+ +T G +D+ + YE L + V R HPA Sbjct: 179 DAGSIPAQLTTGTLDLAIDYLHFDNP----------ELCYEPLHEEHLVVIGRAGHPAFA 228 Query: 193 QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQPDNLL 252 L + H+SI L+ VL R + + +P + + A+ D L Sbjct: 229 GGLALRGYEESGHVSIQPRDRRGSPLEIVLGSARVRRVVHLQVPHYLTIPALVAKSDLLG 288 Query: 253 LATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWLRETI 311 R + + ++ L + LP+ + +L+WH++ P + WLRE + Sbjct: 289 -TIPRRLAERFADVYALQIAPLPIDI-------APIQVSLIWHRQQDAQPGLRWLREQV 339 >UniRef50_A0KIB7 Transcriptional regulator, LysR family n=2 Tax=Aeromonas RepID=A0KIB7_AERHH Length = 303 Score = 216 bits (552), Expect = 8e-55, Method: Composition-based stats. Identities = 68/307 (22%), Positives = 128/307 (41%), Gaps = 20/307 (6%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 ++ +DLNLL+ L+ L++ER+ TKAA+R+ ++ AVS++LA+LR +DDPL + +P G+ Sbjct: 1 MNLRGVDLNLLVVLKALLEERNTTKAAERLAMSQPAVSRALARLRLLYDDPLLIRTPQGM 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQIY 120 PT ++ L E + P P + A + + +M+ +L ++ Sbjct: 61 EPTARAEALLLPLREILHDIEQTFSPPEQLDPAQFEGVLRIGAHTYVEYVMMPSLLARLQ 120 Query: 121 QRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 Q+ P I + + D + G + + +P LF D Sbjct: 121 QQAPNLRIHMVPLNADYESQLDEGVISMVI----------SKQDEVPGRFRRIPLFEDKL 170 Query: 181 CVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQ 240 + HP Q +++F + H+ + S+ +D++L G R + + F Sbjct: 171 ICAAHRSHPLQGQVLCIESFAQAQHLLVAPRGSEGGIVDDLLAAHGMTRHTPLIVQSFLA 230 Query: 241 SLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 + F+ LLL + R + L L +L+ H+R+ + Sbjct: 231 APFILPCAP-LLLTSPARVLRPLMPLLDLVEYETRFALP-------TFEVSLIRHRRDDN 282 Query: 301 NPKIVWL 307 N + W Sbjct: 283 NAMLNWF 289 >UniRef50_B2I357 Transcriptional regulator n=14 Tax=Moraxellaceae RepID=B2I357_ACIBC Length = 286 Score = 216 bits (552), Expect = 8e-55, Method: Composition-based stats. Identities = 49/310 (15%), Positives = 109/310 (35%), Gaps = 28/310 (9%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L +M+ S++ AA ++ +T AV+K + L +F LF ++ G+ T Sbjct: 1 MNLAAFEAFVKVMETGSISVAADQLFITQPAVTKRIHSLEEYFGVKLFESAGRGVQATHA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKP-HHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 S+ + W+ + H QT + ++ + + L A K Q++PQ Sbjct: 61 AHSLLPKVKSWLNELRDIHHTLSHEQTQIQGRLKIGTSHHIGLHHLPAPLKHFVQQFPQV 120 Query: 127 TIKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 T+ + D + + + G++++ F ++Y +++D Sbjct: 121 TLDVHFVDSEQAHEQVLAGDLELAFLTLPPSG---------DERLNYITIWNDPLVFVAA 171 Query: 186 KDHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 HP + L + YP + + ++ G + I MS E + Sbjct: 172 PFHPLAQKKNLTLQDLIEYPSLLPAAQTYTAQITLAEFEKQGLKPKITMSNNPLESIRML 231 Query: 245 AAQPDNLLLATAP-RYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 L + P Q L + ++ ++WH + + Sbjct: 232 V--SIGLGWSVLPKTLLNQDMQQLDLNV-------------EMNRQLGMVWHPARTQSRA 276 Query: 304 IVWLRETIKN 313 + L + ++ Sbjct: 277 MQELIKMMQE 286 >UniRef50_B7RS92 Regulatory protein, LysR:LysR, substrate-binding n=1 Tax=Roseobacter sp. GAI101 RepID=B7RS92_9RHOB Length = 300 Score = 216 bits (552), Expect = 8e-55, Method: Composition-based stats. Identities = 49/313 (15%), Positives = 98/313 (31%), Gaps = 21/313 (6%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 + L + +L QERS AA ++ ++PSA+S+ + L A LF + Sbjct: 1 MKRSNPTLLDFQAVLILSQERSFRAAADQLGLSPSALSRQITSLEARLGSRLFDRDTRSV 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQIYQ 121 T + Q + + L + + +A + +L + + Sbjct: 61 EITVAGSAFAQIAERIINTAEDGLAEFGSYQSAQRGRLTIAGLPSITASLLPQILRNFTA 120 Query: 122 RYPQATIKLRN-WDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 +P+ +K+ + LDA+ G+ DIGF+ RS + +E L D Sbjct: 121 DHPEIDLKIIDALSGSVLDAVDSGQADIGFTAGTVTARS---------RLAFEPLMEDEF 171 Query: 181 CVWLRKDHPALHQTW-NLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFE 239 D P + + P I + S +D Q G + + Sbjct: 172 VALGMPDGPLAEDRAYGWEELVAMPFIVMETGTSVRELIDGTCQRFGHSLSPRFEVAHLA 231 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 + + + L + PR + + L+ + Sbjct: 232 TAGALVSA--GLGITVLPRLTLAILRSETFVIRD-------ISDFGTRRRIGLVRRSGRT 282 Query: 300 HNPKIVWLRETIK 312 +P + ++ Sbjct: 283 LSPTATAFLKYVR 295 >UniRef50_A8TZA8 Transcriptional regulator, LysR family protein n=1 Tax=alpha proteobacterium BAL199 RepID=A8TZA8_9PROT Length = 308 Score = 216 bits (552), Expect = 8e-55, Method: Composition-based stats. Identities = 51/315 (16%), Positives = 100/315 (31%), Gaps = 24/315 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +DL L Q +++ S ++AA+ + ++ AVS+ +A L A PLF+ S G++PT Sbjct: 1 MDLRALRYFQAVVEFGSYSRAAESLRISQPAVSRQVAHLEAELGRPLFMRSGHGVTPTEA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTP-RGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + ++ + + LA ++ L ++ P A Sbjct: 61 GRLLFERSQAILRQVENVTSEIQGADTDLAGTLTLAVPPGAGHFLMPELVRRFRADCPGA 120 Query: 127 TIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL- 184 +K+ + + RG VD+ + + L + + Sbjct: 121 FLKVVAGYSGYIHEWLIRGRVDVA----------CLHGALPQRGFEVIPLVDEEVFLVGQ 170 Query: 185 RKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 P P I S LD L LG ++M + + + Sbjct: 171 PNAAPFSRGYAQARDLSELPLILPGRPNSSRRLLDETLSTLGITPFVSMEIDDTSMVRSL 230 Query: 245 AAQPDNLLLATAPRYC-QYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 Q L + + Y +L V + P ++ +P Sbjct: 231 LKQ--GLGYSLLSQGAFVEYVARGELSAVPF--------RPGAYWPLAMMLSTTRQRSPL 280 Query: 304 IVWLRETIKNLYASM 318 + L TI+ + Sbjct: 281 VDLLIATIRATVGDL 295 >UniRef50_Q46SX0 Transcriptional regulator, LysR family n=4 Tax=Burkholderiales RepID=Q46SX0_RALEJ Length = 300 Score = 216 bits (552), Expect = 8e-55, Method: Composition-based stats. Identities = 42/314 (13%), Positives = 103/314 (32%), Gaps = 23/314 (7%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 S L L + ++ S AA+ ++++ A+S+ + KL L + + Sbjct: 1 MSRINFGLEDLQAFVAIAEKGSFRMAAEALHISQPALSRRIEKLEMTLGSRLLERTTRRV 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQIYQ 121 T + + + + + + + + +AA + L + Sbjct: 61 DMTHIGRQFLEEARAALDILDSAVLRLGDEVGLQRGLVTVAAIPSAALHFLPDAICRFGN 120 Query: 122 RYPQATIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 R+P +++ + + L ++ GE D G + I++ + ++ Sbjct: 121 RHPGVRVRVIDENANAVLASVLSGESDFGL----------NFMGGQEPNIEFRAIRAEPY 170 Query: 181 CVWLRKDHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFE 239 + LR+DHP + + +S+ + + ++N + L R TI Sbjct: 171 RLALRRDHPWAGRDCIAWEELAGQRMVSVSKQSGNRALIENAIAHLTRRPTIHYEANHVV 230 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 L + + + + + +L + LV + L+ + Sbjct: 231 GVLALVEAGLGMAVLPGMSLPRDHPRLCGIELVEPSVD----------RVLALIRRRDRP 280 Query: 300 HNPKIVWLRETIKN 313 P L E + + Sbjct: 281 LQPAAEALYEILTS 294 >UniRef50_C3K9K8 Cyn operon positive regulator n=1 Tax=Pseudomonas fluorescens SBW25 RepID=C3K9K8_PSEFS Length = 299 Score = 216 bits (552), Expect = 9e-55, Method: Composition-based stats. Identities = 40/312 (12%), Positives = 86/312 (27%), Gaps = 25/312 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L + ++ S TKAA+ ++V A+S ++++L LF + +S T Sbjct: 1 MNLKALEYCVEIARQGSFTKAAQALHVAQPALSMAVSRLEEELGVALFNRATRQISVTAE 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 ++ + T + + + + L Q RYP Sbjct: 61 GQLFLARAEACLEGLAGARRELQDLTQLHSGEIRVGVPPMYGIRHIPELLMQFRARYPGI 120 Query: 127 TIKLRNWDYDSLD-AITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + + D + + ++D+ + + +L SD + + Sbjct: 121 AMHVVEGSADDISNRLATRDIDVALL----------ESRRVDPDWESVLLGSDEMVLCMH 170 Query: 186 KDHPALHQ-TWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 HP + P + LD +IA+ + Sbjct: 171 AQHPLAAASSIPASRLQDEPMLVFDNTFLQRHLLDAFCSAARVRFSIALESNFVPLVITA 230 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 + + L + + + F L W + Sbjct: 231 TRSGMGIS-TLLRSVQEQEPGLAGVSF-----------EPAQFMHFNLCWRANEYLSQAN 278 Query: 305 VWLRETIKNLYA 316 ET K + Sbjct: 279 QRFIETAKAYFQ 290 >UniRef50_Q2BJH5 LysR-family transcriptional regulator n=1 Tax=Neptuniibacter caesariensis RepID=Q2BJH5_9GAMM Length = 312 Score = 216 bits (551), Expect = 9e-55, Method: Composition-based stats. Identities = 46/323 (14%), Positives = 108/323 (33%), Gaps = 28/323 (8%) Query: 1 MKKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPL 60 M +I+ + L + S T+AA+ +++T S ++ ++ +L L + Sbjct: 1 MTNNIS---IRHLRAFVEIASCGSFTRAAENLHLTQSTLTATIKQLEDQACLKLLDRTTR 57 Query: 61 GLSPTPLMVSMEQNLAEWMQMSNLLLDKPHH-QTPRGLKFELAAESPLMMIMLNALSKQI 119 + T + + + + + H T + + +AA ++ +L + K Sbjct: 58 RVLLTGEGETFLPVAEKLISDFDTAFNDLHATATQQQGQIGVAASPSMISRVLPPIIKAY 117 Query: 120 YQRYPQATIKLRNWDYDSLDA-ITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSD 178 + P+ I LR+ + ++ + EVD G G S+ + Y + D Sbjct: 118 HLDSPKIGIYLRDDNASGIEQRVLENEVDFGLGGNHSNQP----------ELSYTPVLKD 167 Query: 179 VPCVWLRKDHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTI---AMS 234 V + H + D P + + + L + +E + + + Sbjct: 168 RYGVVVPSGHHLAEKAIIRWDEISSLPQLHLTEDTGTRSQLRKLEKENDLDLQLQGAGIE 227 Query: 235 LPEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLW 294 + + L ++ P +L + L + L ++ Sbjct: 228 VSTPAGLAELIKT--GLGISLLPSLAASTRSFDELHFIPLD-------EPALFREICIIS 278 Query: 295 HKRNSHNPKIVWLRETIKNLYAS 317 K S +P L + I +++ Sbjct: 279 RKGRSLSPAAESLLQMINEHFSA 301 >UniRef50_A3VVC0 Hydrogen peroxide-inducible genes activator protein n=1 Tax=Parvularcula bermudensis HTCC2503 RepID=A3VVC0_9PROT Length = 306 Score = 216 bits (551), Expect = 9e-55, Method: Composition-based stats. Identities = 41/306 (13%), Positives = 88/306 (28%), Gaps = 20/306 (6%) Query: 6 TTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPT 65 + L L L + R+ KAA V+ ++S+ + L L S + T Sbjct: 3 DQISLRQLRYFTALSRCRNFRKAAAECGVSQPSLSQQIKNLEERLGQSLVERSSSAVILT 62 Query: 66 PLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQ 125 PL + E + L+ + P L + L +L + + +++ YP Sbjct: 63 PLGREVAAAAVELLDRV-RALEALADRGPLTGVLRLGVKPTLGPYLLPQVIRHLHKSYPD 121 Query: 126 ATIKLRN-WDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 + ++ + + G D+ + LF + + + Sbjct: 122 LGLVVQEALPLNLERELIEGGHDLALLQLPVSSP----------DLSTMRLFREPVFLAV 171 Query: 185 RKDHPALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 DHP +T+ +++ + + +E G + Sbjct: 172 AADHPLARKKTFGPPDLQGVDVLTLSPRHHLHDQVMRLCEESGARLRRDYEGTSLDALRQ 231 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 M L P + L + ++ + L W K + Sbjct: 232 M--AGMGLGATFLPALYVQSEIRRDADVRIL-----KPARRPMFRSIALAWRKGAGLDAA 284 Query: 304 IVWLRE 309 + + E Sbjct: 285 VNAIAE 290 >UniRef50_B1M8F7 Transcriptional regulator, LysR family n=4 Tax=Rhizobiales RepID=B1M8F7_METRJ Length = 304 Score = 216 bits (551), Expect = 9e-55, Method: Composition-based stats. Identities = 46/317 (14%), Positives = 96/317 (30%), Gaps = 26/317 (8%) Query: 6 TTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPT 65 ++L L + + S T AA+ + V+ +S+ + L LF S + T Sbjct: 3 RPMELRHLRYFAAVAEHLSFTAAAQSLGVSQPPLSQQIRDLEVEIGVNLFERSSRRVVLT 62 Query: 66 PLMVSMEQNLAEWMQMSNLLLDKPHHQT-PRGLKFELAAESPLMMIMLNALSKQIYQRYP 124 N + + +D+ + S ++ L + QR+ Sbjct: 63 AAGEDFLGNARAVLAQVSDAVDRARTIGTGAAGILNIGMTSSVLAGPAGCLIRAFEQRFR 122 Query: 125 QATIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVW 183 +++ D + A+ D+ F + + + + CV Sbjct: 123 AVDVRIHEMAPTDQIAALKANRTDLSFLRSPPE----------DPDLVAHMAWPERLCVA 172 Query: 184 LRKDHPA-LHQTWNLDTFLRYPHISIC-WEQSDTWALDNVLQELGRERTIAMSLPEFEQS 241 + ++H ++ +D F P IS+ + + + G +I+ + E Sbjct: 173 VPREHALAAGRSVAIDVFRSEPLISLGLESSRFAADIYHACIQRGFTPSISQQVNEASSL 232 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 + + A L A P + + + L L H R N Sbjct: 233 INLVAAGFGL--AIIPEFVGRA--------RHPDVVVLPIKPSFLSADVYALHHTRR--N 280 Query: 302 PKIVWLRETIKNLYASM 318 P I I+ + Sbjct: 281 PVIDNFLALIREEAPGL 297 >UniRef50_D1ULQ3 Transcriptional regulator, LysR family n=1 Tax=Burkholderia sp. CCGE1001 RepID=D1ULQ3_9BURK Length = 313 Score = 216 bits (551), Expect = 9e-55, Method: Composition-based stats. Identities = 41/328 (12%), Positives = 90/328 (27%), Gaps = 42/328 (12%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 + + L+ + + ++++AA ++++ AVS L L+ F +PL+ G+ TP Sbjct: 1 MTPDQLITFAAVAEHLNISRAALALHLSQPAVSGQLRLLQDEFGEPLYQRDGRGVRLTPA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + Q A + A + +L L ++RYP+ Sbjct: 61 GEQLAQYAARLRDTWRQAHAYRDALRGLEHGTLRIGATTTPASYLLPYLLADFHRRYPEV 120 Query: 127 TIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + + D + A+ G VDI LP D + Sbjct: 121 ALHTVDGNTTDIVGAL--GSVDIALIEGPVGTD-------LPPDTAVHAWREDEIVAIMP 171 Query: 186 KDHPA---------------------LHQTWNLDTFLRYPHISICWEQSDTWALDNVLQE 224 + H + +L P I ++ Sbjct: 172 RSHWLAGAGEVGAAGGGEGGEGRQGGQASSLDLAALGAEPLIVREAGSGVRQIVERAFAR 231 Query: 225 LGRERTIAMSLPEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQK 284 G +A+ + E + ++ L + +L + Sbjct: 232 AGLPMRVALEIAGVEGVKEAVRAGMGIGFV---SAMSMRHENGALRVFSL-------APQ 281 Query: 285 KLEVPFTLLWHKRNSHNPKIVWLRETIK 312 L +++ + + + Sbjct: 282 PLTRRLSIVVPHAGTPSRAVQQFLTMCL 309 >UniRef50_C0CQV4 Putative uncharacterized protein n=1 Tax=Blautia hydrogenotrophica DSM 10507 RepID=C0CQV4_9FIRM Length = 311 Score = 216 bits (551), Expect = 9e-55, Method: Composition-based stats. Identities = 39/312 (12%), Positives = 100/312 (32%), Gaps = 22/312 (7%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 + + + L + ++++AAK++ +T +VS+++ +L + LF L Sbjct: 1 MEVKLMTIRHLRIFLAVADSGTMSQAAKKLYITQPSVSQAVRELEEHYRVLLFERLSKKL 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQR 122 T + + + + L + + + A + L + ++ Sbjct: 61 YITEAGKTFYSYAKQVVFQFDQLEEHM--FRDLKERLRIGATVTVGSRALPEIVREFRLE 118 Query: 123 YPQATIKLRNWDYDSLDA-ITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPC 181 +PQ + + +++ + E+D+G + R + + D Sbjct: 119 HPQTDVYCYGGNTQTIEEKLLAMELDVGIIEGKVQSR----------DLVAIPMIDDYLV 168 Query: 182 VWLRKDHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQ 240 + KDHP + + + +N L++ G + Sbjct: 169 LVCGKDHPFMEREKLYPSDLKDQEFVMREKGSGTRALFENYLEKHGVRIKVVFEESSPAA 228 Query: 241 SLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 L L + + + + +L A ++++ F+ ++HK Sbjct: 229 ILRTVQINQCLAVLSV-GLIETEVKEGRLKAFA-------QEEQEWNRKFSFVYHKDKFL 280 Query: 301 NPKIVWLRETIK 312 I L +K Sbjct: 281 TVGIKELERIVK 292 >UniRef50_UPI0001A45942 HTH-type transcriptional regulator gltC n=1 Tax=Neisseria subflava NJ9703 RepID=UPI0001A45942 Length = 297 Score = 216 bits (551), Expect = 1e-54, Method: Composition-based stats. Identities = 48/316 (15%), Positives = 99/316 (31%), Gaps = 28/316 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNS----PLGLS 63 +D L C L++ +S + A +N+T VSK + L PL + Sbjct: 1 MDFKSLHCFAELIRLQSFSATASALNLTQPTVSKIIQSLEEELGVPLLCRENGRKKRQVQ 60 Query: 64 PTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQIYQR 122 PT + + ++ + +LLL + L + +L+ +Q+ Sbjct: 61 PTAIGEEVYRHALNLLHERDLLLARVDDYRHVKSGTLRLG-LALFGSDLLSHALFDFHQK 119 Query: 123 YPQATIKLRNWDYDSLDA-ITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPC 181 +P + +++ + E+D G +LL+ + D L Sbjct: 120 WPDIELSFLEQGSLAIEQSLRNNELDAG-----------QLLAPVHEDFDSITLCDYPLV 168 Query: 182 VWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQS 241 V + K+ A H L + P I S + + G + ++ Sbjct: 169 VLMPKN-RARHDALTLKSLQHEPFILFGAGFSLNETIQTACRNQGFTPNVVCRTGQWNLV 227 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 M A + +A P Y + + ++ T+ W K Sbjct: 228 ADMVAHN--MGIALLPEYYAR-------KINPDVFAAIPLVEPEIRWQLTMAWKKHQRPT 278 Query: 302 PKIVWLRETIKNLYAS 317 P + + ++ + Sbjct: 279 PALRAWLDVVREAFGR 294 >UniRef50_Q3JWC0 LysR family regulatory protein n=26 Tax=Burkholderia RepID=Q3JWC0_BURP1 Length = 322 Score = 216 bits (551), Expect = 1e-54, Method: Composition-based stats. Identities = 39/317 (12%), Positives = 91/317 (28%), Gaps = 27/317 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +DL L ++ +E KAA+R+++ +++ ++ L LF S + T Sbjct: 17 IDLRRLRYFIVVAEELHFGKAAQRLHLAQPPLTRHISALEGELGLRLFDRSTRSVKLTAE 76 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQT-PRGLKFELAAESPL-MMIMLNALSKQIYQRYPQ 125 + + + + + K L S + + L + + +P Sbjct: 77 GELFLPHARDVLDAVHRAEIASQRAALGKEGKVALGYTSSVPLCDAFGTLIRNFARSFPD 136 Query: 126 ATIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 + L +I G +DIG + + + ++ V + Sbjct: 137 IELSLVEASSAQQGRSIKEGLLDIGIG--------WKNSFEDYEGCRVKTIAAEPLVVAV 188 Query: 185 RKDHPALHQ-TWNLDTFLRYPHISICWEQSD---TWALDNVLQELGRERTIAMSLPEFEQ 240 ++ + + ++ + A D + G S + Sbjct: 189 SQERALASEASLAVEQLADETFVLFPPGYGSTLDRKAFD-LCATAGFTPRRGPSASQMTT 247 Query: 241 SLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 + + A +A P + + V L + + L+W + Sbjct: 248 MIALVAAGRG--VAIVPE-AVSTLRKPGVAYVPL-------TDESALIELVLMWRE-AGL 296 Query: 301 NPKIVWLRETIKNLYAS 317 + E K A Sbjct: 297 SLAARSFVEWHKAHVAQ 313 >UniRef50_B6B1G4 LysR family transcriptional regulatory protein n=1 Tax=Rhodobacterales bacterium HTCC2083 RepID=B6B1G4_9RHOB Length = 326 Score = 216 bits (551), Expect = 1e-54, Method: Composition-based stats. Identities = 46/317 (14%), Positives = 107/317 (33%), Gaps = 28/317 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +DL L + +E AA+R+ + +A+S + L + LF + +S T Sbjct: 1 MDLRQLRAFVAVAEELHFRTAAERLGMAQAAISTKIKDLESELGFKLFFRTTRHVSLTQA 60 Query: 68 MVSMEQNLAEWMQMSNLLL-DKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 +++ + + + R + + ++ L + + ++P Sbjct: 61 GAVFLESVRDTLNTLENGVAAASAAADNRLDRLRIGGIDGALIWYLPPILRDFTAKFPSV 120 Query: 127 TIKLRNWDY--DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 + + D +D++ +DI F ++ +E+L + V L Sbjct: 121 SPTMTESSSSEDQIDSLESHHIDIAFFRPP----------TMRPGFKFELLLQERIYVAL 170 Query: 185 RKDHPALHQ--TWNLDTFLRYPHISIC--WEQSDTWALDNVLQELGRERTIAMSLPEFEQ 240 ++H + ++ P IS + N + G I M + + Sbjct: 171 PRNHRLATRTGPVSIKELADDPVISYPIHARPHLNRLIVNGFAKAGVRPKIIMEVIDKFT 230 Query: 241 SLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 +L + A+ + +A P + +P ++ L + F + W + N Sbjct: 231 TLQLVAR--GIGVAFVPEWIGALYL--------PNMPLRPLAEEDLTLQFGVAWRE-NDR 279 Query: 301 NPKIVWLRETIKNLYAS 317 N + ++ AS Sbjct: 280 NETLREFLIPVREHAAS 296 >UniRef50_B9JE08 Transcriptional regulator protein n=11 Tax=Rhizobiales RepID=B9JE08_AGRRK Length = 312 Score = 216 bits (551), Expect = 1e-54, Method: Composition-based stats. Identities = 43/309 (13%), Positives = 87/309 (28%), Gaps = 20/309 (6%) Query: 11 NLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVS 70 LL + + +S T+AA+ +++ S+VS + L A LF S GL T + Sbjct: 4 RLLKTFLAVARSKSFTRAAEEVHLAQSSVSDQMQSLEAELGAALFTRSKQGLELTQAGET 63 Query: 71 MEQNLAEWMQMSNLLLDKPHHQTP-RGLKFELAAESPLMMIMLNALSKQIYQRYPQATIK 129 + E + +++ + A + + L A +P ++ Sbjct: 64 LVSYAEELLALADEARAAVAASAGHEAGSVTIGALETIAAVKLPAWLSAFQNDHPDIGLR 123 Query: 130 L-RNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDH 188 L D L + E+D+ F L + ++ + Sbjct: 124 LKVAGSGDLLRKLEASEIDLAFCFD---------QGRLDERFVSRAIATEPLILATSPAV 174 Query: 189 PALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGR-ERTIAMSLPEFEQSLFMAAQ 247 +L ++ + D E G A + + A Sbjct: 175 KFAAGKLDLAELAAMDFLTTEVGCAYRSMFDTAFAEAGIVAPKPAAEVGSIGAIARLVAA 234 Query: 248 PDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWL 307 + PR + V ++W +R P + +L Sbjct: 235 GAGIG--LVPRLAVAEALDRG------EISELPWPGPTQVVSLVMIWRRRRVQPPVLRFL 286 Query: 308 RETIKNLYA 316 + +A Sbjct: 287 LAAASDHFA 295 >UniRef50_A0R7B5 LysR-family protein transcriptional regulator n=4 Tax=Mycobacterium RepID=A0R7B5_MYCS2 Length = 310 Score = 216 bits (551), Expect = 1e-54, Method: Composition-based stats. Identities = 52/314 (16%), Positives = 102/314 (32%), Gaps = 27/314 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L + +E S T+AA+R++V SA+S S+AKL L + +S T Sbjct: 1 MELRQLEHFVAVAEELSFTRAAQRVHVVQSALSSSVAKLERELGVELLDRTRQQISLTAA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTP-RGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 ++ + +D + + + + ++ +P Sbjct: 61 GDRFRTYALGVLREARNAVDVVSEFRGELSGTVDFGSLISFGPMDVARALGDFHRAHPHV 120 Query: 127 TIKLR---NWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVW 183 ++LR + L + G +D+ + P ++ +LF + Sbjct: 121 RLRLRLSQSGASAYLSGLIEGSLDLALISVP---------NRFPPQLEMRLLFEEPMVFV 171 Query: 184 LRKDHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLP-EFEQS 241 R DHP + +LD + E D+ + G + +P F Sbjct: 172 CRPDHPVARRRRVSLDVLGTEDLVGFPPEFGLRRLTDDAFRAAGVQARTQYEVPAGFAAV 231 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 + A + L A P +L L V L + + L + Sbjct: 232 ADLVA--NGLGTALMP--ASEARRLGNLTAVTL--------ETAVIWQVYLASPPADRMT 279 Query: 302 PKIVWLRETIKNLY 315 P L +T+ + Sbjct: 280 PATARLADTLLDEA 293 >UniRef50_C7GB30 Transcriptional regulator n=1 Tax=Roseburia intestinalis L1-82 RepID=C7GB30_9FIRM Length = 316 Score = 215 bits (550), Expect = 1e-54, Method: Composition-based stats. Identities = 37/307 (12%), Positives = 90/307 (29%), Gaps = 21/307 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++ L + + +E S+TK A+++ +T AVS+++ +L + PT Sbjct: 1 MNNRQLTIFRTVCEEGSMTKTAEKLYMTQPAVSQTIKELEQESGVCFLERYNRKVVPTES 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQAT 127 + Q + + L + A + + ML + ++YP Sbjct: 61 GRLLYQYACHILGLYQDLEQHLKETEGVR-TIRIGANLSVGVKMLRGFIRAFEKKYPDIQ 119 Query: 128 IKL-RNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRK 186 +K+ + ++ + ++D+G E D + Sbjct: 120 VKVTVSGSVRLMELLKTHQIDLGLMEDLPGET----------DYIQEPFAKDRTLIVAAP 169 Query: 187 DHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMA 245 DHP + + + + + +L+ + + Sbjct: 170 DHPLAGKEHVRFEDLKKENFLLREKGAGVRDRFEAILRTKDCVIDPLWESRSTKVLVQAV 229 Query: 246 AQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIV 305 D ++ P L + + LE L++H N + Sbjct: 230 E--DGFGISVLPYCLIEEYLKEG------RLAEIKVEDLCLERNLNLVYHPHKVWNDPLR 281 Query: 306 WLRETIK 312 + ++ Sbjct: 282 DFMDIVR 288 >UniRef50_B5EJJ4 Transcriptional regulator, LysR family n=3 Tax=Acidithiobacillus RepID=B5EJJ4_ACIF5 Length = 300 Score = 215 bits (550), Expect = 1e-54, Method: Composition-based stats. Identities = 49/315 (15%), Positives = 99/315 (31%), Gaps = 26/315 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +DL L +L + + +AA R+++ ++S+S+ L PLF+ + +S T Sbjct: 1 MDLRHLRHFVVLAEALNFHRAATRLHLAQPSLSRSIRALEEEIGLPLFLRNQREVSLTAA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQT-PRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + + + + + + + +L L + Q + Q Sbjct: 61 GRVLLPEARQLLAQARRTEALLGDLQNGQAGTLRIGFLASTAIALLPGLLRGFRQHFSQV 120 Query: 127 TIKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 ++LR D L A+ ++DIGF + I +L + + L Sbjct: 121 HLELREMSSDAQLQALRDDQIDIGFIRD----------IGILPDIHQHLLQREALMLVLP 170 Query: 186 KDHPALHQT-WNLDTFLRYPHISICWE--QSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 +DHP ++ L I + E + + + I M L + Sbjct: 171 EDHPFAAESAIALHRLHHESLILLRREVAPASYDRILAQCHIHALKPHILMELADSNAVF 230 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWH-KRNSHN 301 L Q + L + +L W ++ N Sbjct: 231 SAVLAGLGLGFLF---SAFAEIQRPGIVFRPL-------ADVLGDSEVSLAWRGRQEDGN 280 Query: 302 PKIVWLRETIKNLYA 316 P ++ YA Sbjct: 281 PAARTFVTMVQQRYA 295 >UniRef50_A8FC55 LysR family transcriptional regulator n=2 Tax=Bacillus pumilus RepID=A8FC55_BACP2 Length = 298 Score = 215 bits (550), Expect = 1e-54, Method: Composition-based stats. Identities = 42/312 (13%), Positives = 96/312 (30%), Gaps = 21/312 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +D + + TKAA+++ ++ +S+ + L A PLF + T Sbjct: 1 MDTRHITYFMAVFDHLHFTKAAEQLGISQPTLSQQIRLLEAEVGMPLFDRIGKKVVATEA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHH-QTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + Q + +Q + + + LA + L L + YP+ Sbjct: 61 GSLLYQYGMKMLQAERDAKNAMKELLSEKRGNVRLAVLPSDLDFQLVPLFVEFKTLYPET 120 Query: 127 TIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRK 186 +K + + + +VD+G L + L S+ ++ Sbjct: 121 NLKAYS-TIFVREEVLSHKVDLGIG----------LRGPADKRLIQIPLGSEPYELFAHS 169 Query: 187 DHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMA 245 + ++ L+ + + +++V +E G E M + L + Sbjct: 170 ESELAQKSEVTLEELTEHALVMYPKGYLGRDLVEDVCKEQGVELDTVMEVGSASSLLQLV 229 Query: 246 AQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIV 305 + PR +V++P+ L ++ + Sbjct: 230 EA--GIGATIQPRGLLQQQATWP-NIVSIPIA-----DPAPVRHLELTYYTDRFVSKAQQ 281 Query: 306 WLRETIKNLYAS 317 L E + + + S Sbjct: 282 QLSEWLIDFFKS 293 >UniRef50_B0NK79 Putative uncharacterized protein n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0NK79_EUBSP Length = 297 Score = 215 bits (550), Expect = 1e-54, Method: Composition-based stats. Identities = 38/309 (12%), Positives = 94/309 (30%), Gaps = 19/309 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 + ++ L + + + +S + AAK++ + ++S+ + L LFV P ++ T Sbjct: 1 MQIHQLRYVLAVAENKSFSAAAKKLFLAQPSLSQQIINLEKELGIALFVRHPKSVTLTDA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNALSKQIYQRYPQA 126 ++ + + L D + + + L+ + ++ YP Sbjct: 61 GEQFLKSARRIVNEVDQLSDLMQKHSQLQNGTLRIGLLWVASYLNLSHILTDYHRIYPGI 120 Query: 127 TIKL-RNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + L + L + ++ F S E + + D + Sbjct: 121 SYSLTVDGSNTLLQMLDSRSINAAFVI------SSEAALQHKEDLFSHRIMDDRYVAIVS 174 Query: 186 KDHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 + +P + ++ I E + L+ V + I + + + + Sbjct: 175 RQNPLSARPFISMQDLQSENIIMPAKESAFRKELEQVFDQHYIAPRILCETSQSDIVMQL 234 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 A+Q + A + +V L + L + K P I Sbjct: 235 ASQNLAIGFA--SNSIAQALKTEDCRIVPL--------ENVLLRTIYYVTLKELLDYPAI 284 Query: 305 VWLRETIKN 313 + + Sbjct: 285 RSFTDFVIQ 293 >UniRef50_A3EQ05 Putative transcriptional regulator, LysR family n=2 Tax=Leptospirillum sp. Group II RepID=A3EQ05_9BACT Length = 303 Score = 215 bits (550), Expect = 1e-54, Method: Composition-based stats. Identities = 38/315 (12%), Positives = 91/315 (28%), Gaps = 23/315 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 + + L + + S T+A + + +T A+S + L PLF + T Sbjct: 1 MTHDQLRIFLKVAELGSFTQAGETLFLTQPAISLQVKTLEQHLGVPLFERKGRQVLLTEA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNALSKQIYQRYPQA 126 V + + M+ + + + + + + +L ++ + Q+ PQ Sbjct: 61 GVRLLPHARRIMEEIADARARVAELSSGALGNLRIGSSTTIGTAILPSILYEFSQKNPQI 120 Query: 127 TIKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 L + + + E+DIGF + + L D + Sbjct: 121 RTSLSILNSHRIVFDLKTSEIDIGFIEGDLTRTEA-------QGVRRSFLAQDRLVLVDS 173 Query: 186 KDHPA-LHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERT---IAMSLPEFEQS 241 ++ P +L+ R P I L++ L + G +++++ + Sbjct: 174 REKPFVSGDETSLEEIRRLPLILREAGSGTRQILEDSLLDRGFPIDLFTVSLTVGQTGVI 233 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 M +A L V + + ++ + Sbjct: 234 KKMV--GKGAGIAFMSVLAIEKEDQDLLRTVRV-------RDFSPIRDLWIVT-PGRRVS 283 Query: 302 PKIVWLRETIKNLYA 316 + + Sbjct: 284 SATRLFLDCVHESLD 298 >UniRef50_A5D1Z5 Transcriptional regulator n=1 Tax=Pelotomaculum thermopropionicum SI RepID=A5D1Z5_PELTS Length = 297 Score = 215 bits (550), Expect = 1e-54, Method: Composition-based stats. Identities = 39/318 (12%), Positives = 80/318 (25%), Gaps = 45/318 (14%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLA-----------KLRAWFDDPLFV 56 ++++ L + + + S T+AA+ + KL LF Sbjct: 1 MEMHQLEYVLAVAKYNSFTRAAEE-----------IKISQSSLSQQISKLENELGVSLFA 49 Query: 57 NSPLGLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQ-TPRGLKFELAAESPLMMIMLNAL 115 + + TP + + L + L L Sbjct: 50 RTTRSVQLTPAGAEFVAYAKRIISEAIEARRCIQEYVAVEKGHLNLGVIPIIGYYNLPNL 109 Query: 116 SKQIYQRYPQATIKLRNWD-YDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEV 174 + YP TI L + L + ++D + Y Sbjct: 110 LANFAKNYPGITISLLEEQCDELLRLLQASKIDAAIVQHVIPEMQ----------LQYYP 159 Query: 175 LFSDVPCVWLRKDHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAM 233 L +D V HP ++ ++ I N G E + + Sbjct: 160 LLTDQMVVVTYDRHPFSTRKSVDIRELKNERFIVTPPVSGHYHDFINACHLAGFEPKVLV 219 Query: 234 SLPEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLL 293 + L + + + + ++ L ++ L + L Sbjct: 220 TCSMVRTILGLVREE--VGITVLSSCVAALDKTPGLSIIPL--------TPPVNRKIVLA 269 Query: 294 WHKRNSHNPKIVWLRETI 311 K N +P + + I Sbjct: 270 VSKNNGLSPALKVFVKYI 287 >UniRef50_B8GM38 LysR family transcriptional regulator n=4 Tax=Proteobacteria RepID=B8GM38_THISH Length = 337 Score = 215 bits (550), Expect = 1e-54, Method: Composition-based stats. Identities = 49/306 (16%), Positives = 100/306 (32%), Gaps = 25/306 (8%) Query: 10 LNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMV 69 L L Q S+++AA+R+ V+ +VS + L + LF + T Sbjct: 14 LRQLRAFCQAAQTGSISRAAERLCVSQPSVSLLIKGLEQDLNVLLFERRGPRIELTAAGQ 73 Query: 70 SMEQNLAEWMQMSNLLLD--KPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQAT 127 + + ++ + L + +LAA ++ +L K+ +RYP Sbjct: 74 VLLETSLPLVEGMDHLPEVFAARLGEAGQGSLDLAAGESTILYLLPEYVKRFSERYPAVK 133 Query: 128 IKLRNWD-YDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRK 186 + L N D L + GEVD + +P + Y +F+ P + Sbjct: 134 LHLHNVTGRDGLKMLRAGEVDFAVGS----------MIDVPEDMHYHPIFTYEPMLITAL 183 Query: 187 DHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMA 245 +HP + +L+ I S +D V + G + + + +E Sbjct: 184 NHPLAKKKKVSLEDVSPCGLILPPRHLSTWSIVDLVFHQHGLDYHVVLEAGGWEVIKKFV 243 Query: 246 AQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIV 305 ++ ++ C + L + ++ K +P+ Sbjct: 244 E--LDMGVSIVTSICLTGEEK---------LAAIPLSDYFPRRTYGVVMRKGKFLSPQAC 292 Query: 306 WLRETI 311 E + Sbjct: 293 SFLELM 298 >UniRef50_C9PJ12 Putative transcriptional regulator protein n=1 Tax=Vibrio furnissii CIP 102972 RepID=C9PJ12_VIBFU Length = 308 Score = 215 bits (550), Expect = 1e-54, Method: Composition-based stats. Identities = 54/298 (18%), Positives = 94/298 (31%), Gaps = 25/298 (8%) Query: 8 LDL--NLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPT 65 +D+ L L +ER+ T AA ++++T SA+S+ + KL LF + T Sbjct: 1 MDISYRQLKAFIALAEERNFTYAADKVHITQSALSQMMKKLAQQLSCELFERKGRTIVLT 60 Query: 66 PLMVSMEQNLAEWMQMSNLLLDKPHHQT-PRGLKFELAAESPLMMIMLNALSKQIYQRYP 124 + Q + L+ + H + +++ L + + +RYP Sbjct: 61 EAGHHLYQEARFIVNRLEKLVQENHDRQHGYNKSLVVSSLYTLCASLAPKTLNDLKKRYP 120 Query: 125 QATIKLRNWD-YDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVW 183 T +L D ++ G DIG + +++++LF D C Sbjct: 121 DFTFRLIEERVDDITHSVLEGRADIGINTNP-----------NHPDLNFDLLFRDSLCFV 169 Query: 184 LRKDHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 R DHP Q + + +Y I + S D +G S L Sbjct: 170 CRADHPLAEQQDISWEQAHQYATIGVSPGNSLRTLADEAFSRVGLTYDPEFSASHTSTLL 229 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 M A L N + + Q L+ K Sbjct: 230 GMIAS--GLGSTILSSTIAGLNASDTIRFIP-------IVQPVQFRLVGLITRKDTQR 278 >UniRef50_Q15ZP2 Transcriptional regulator, LysR family n=2 Tax=Alteromonadales RepID=Q15ZP2_PSEA6 Length = 294 Score = 215 bits (550), Expect = 1e-54, Method: Composition-based stats. Identities = 44/312 (14%), Positives = 95/312 (30%), Gaps = 23/312 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLG--LSPT 65 ++L+ L + S ++AA+ + ++ AVSK+L +L L + G L+ T Sbjct: 1 MNLHALRVFHSVAHLGSFSQAAEALYISQPAVSKALKELEHQLGMQLIERAAKGKKLALT 60 Query: 66 PLMVSMEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQIYQRYP 124 S+ + + L+ +T + A + + L + Q+YP Sbjct: 61 QGGQSLFNHARSIFAIEQAALEDVRARTGLKQGTLVIGASTTIAGYWLAPYLARFNQQYP 120 Query: 125 QATIKLRNWDYDSLD-AITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVW 183 + ++++ + ++ A+ +D S+ I + D + Sbjct: 121 KIKVEVQVANTAQIEQALLACTIDFALVEG----------SASDPHISSQHWQDDPMSIV 170 Query: 184 LRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 + ++L E G +M L E Sbjct: 171 YSSSLKPADDKEKW--LSEQRWLLREPGSGTRQMSFSLLAEQGIAVNDSMQLGSNEAIAR 228 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 + +A P+ L L L + + K L P L ++ +P Sbjct: 229 GV--TQGMGVALLPQVVTE----DLLALKKLKV-ISTQKSKLLSRPLYQLEYRDRPSSPA 281 Query: 304 IVWLRETIKNLY 315 + + Sbjct: 282 ANAFAQILYQAV 293 >UniRef50_Q0S6C8 Transcriptional regulator, LysR family protein n=3 Tax=Rhodococcus RepID=Q0S6C8_RHOSR Length = 302 Score = 215 bits (550), Expect = 1e-54, Method: Composition-based stats. Identities = 41/314 (13%), Positives = 96/314 (30%), Gaps = 28/314 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +++ + + +E + +AA+ +++ AVS+ + +L LF + + T Sbjct: 1 MEIRWMKSFVAVAEELNYGRAAEVLHIAQPAVSQQVQQLEKRLGVKLFDRTTRSVRLTAA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 Q + + +D P + + L++L++ + +RYP Sbjct: 61 GERFLQPCKDALAGIVRAVDAAVIADPAVEGRVRVGFSGAYGQTELSSLARSVRRRYPLI 120 Query: 127 TIKLR--NWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 + L LD I G++D+G + + + L Sbjct: 121 DLVLEGATVSGQILDEIWEGQLDLGIVSDAV----------SHPHVLTRQISVEYLSALL 170 Query: 185 RKDHPAL-HQTWNLDTFLRYPHISICW--EQSDTWALDNVLQELGRERTIAMSLPEFEQS 241 DHP ++ +L ++ + L ++ G I + Sbjct: 171 PSDHPLAERKSIDLAELRDETFVANPAATGSTLRRDLLAACRDAGFTPNIVQETTDGIVL 230 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 + A + +A P + + + EV L W + Sbjct: 231 TALVAA--GVGVALVP---------GDVQTYPNRVVLVPLDAGRYEVRAALAW-SDRPVS 278 Query: 302 PKIVWLRETIKNLY 315 P + + + + Sbjct: 279 PVVQTVLDLAAEVL 292 >UniRef50_B1ZCQ9 Transcriptional regulator, LysR family n=3 Tax=Rhizobiales RepID=B1ZCQ9_METPB Length = 311 Score = 215 bits (549), Expect = 2e-54, Method: Composition-based stats. Identities = 37/318 (11%), Positives = 88/318 (27%), Gaps = 25/318 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L + +E T+AA+R+ + A+S+ + +L F LF G+ T Sbjct: 4 MELRHFRYALAVAEELHFTRAAQRLGIAQPALSQQIRQLEEEFGTQLFHRLTRGVELTEA 63 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQT-PRGLKFELAAESPLM-MIMLNALSKQIYQRYPQ 125 ++ + ++ + + +++ + YP+ Sbjct: 64 GRALLPYARAALAAADEGTAAVRRAAKGELGQLRIGFTGSASFNPVVSGTIGRFRDAYPE 123 Query: 126 ATIKLRN-WDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 + L+ L ++ G + + F + L + L Sbjct: 124 VELDLQEQVTSMLLRSLREGRIQLAFGRAADDET---------DGLRRIALPEESLWAAL 174 Query: 185 RKDHPALH-QTWNLDTFLRYPHISICWEQS--DTWALDNVLQELGRERTIAMSLPEFEQS 241 H +L + P I A+ G I P+ + Sbjct: 175 PAKHRLAGAGRIDLASLAADPFILYPRANGRLLYDAIVAACGRAGFSPRIVQEAPQMAST 234 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 + + A + +A P + A + + E +L+ Sbjct: 235 VNLVAA--GVGVALVPASMRLLQ--------APSVSYVELSTPGTVASLSLVQGPDLLMT 284 Query: 302 PKIVWLRETIKNLYASMA 319 + +++ A Sbjct: 285 ASVRNFIRCLEDAKRDHA 302 >UniRef50_Q5WBL7 LysR family transcriptional regulator n=3 Tax=Bacillus RepID=Q5WBL7_BACSK Length = 299 Score = 215 bits (549), Expect = 2e-54, Method: Composition-based stats. Identities = 42/312 (13%), Positives = 88/312 (28%), Gaps = 23/312 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L+ L +++ S+TKAA+ ++++ AVS L A + PL G+ PTP Sbjct: 1 MNLHGLRLFYTVVRTGSITKAAQALHISQPAVSSQLKAFEAELNIPLLQKDGRGIVPTPF 60 Query: 68 MVSMEQNLAEWMQ---MSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYP 124 + + +AA +L L+ +YP Sbjct: 61 GKQLADKAETLFSVETHIEAFAQQFRDV--GAGHIHVAATYLPANFLLPQLAGAFKAQYP 118 Query: 125 QATIKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVW 183 +++ + + + R + DI + ++ D Sbjct: 119 TIDLQIETVNSQQAFEKLARYKADIAI--------YAGTIDKCAKDFVWDEWLEDELWFV 170 Query: 184 LRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGR-ERTIAMSLPEFEQSL 242 H ++ +L + P + S L + Q TIA+ ++L Sbjct: 171 AAPSHRLANERVSLAEVVIEPFVMREEGSSTRAQLFTLCQANHLKPPTIALQFSGLNEAL 230 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 + + L + + + K+ N Sbjct: 231 SAVMA--GFGINFVSSLVAKEHIKRG------DLGRVYVEHVPIVNSIAICTRKQEQQNE 282 Query: 303 KIVWLRETIKNL 314 + K Sbjct: 283 LVQRFISHCKQT 294 >UniRef50_A1UYG7 Transcriptional regulator, LysR family n=45 Tax=Burkholderia RepID=A1UYG7_BURMS Length = 439 Score = 215 bits (549), Expect = 2e-54, Method: Composition-based stats. Identities = 66/315 (20%), Positives = 112/315 (35%), Gaps = 22/315 (6%) Query: 6 TTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPT 65 LDLNL L + + ++ AA+ +++T AV+ +L +LRA F DPLFV + PT Sbjct: 136 HRLDLNLFRVLDAVYVQGGISAAARALHLTQPAVTHALNRLRAHFGDPLFVRQGNKVVPT 195 Query: 66 PLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQIYQRY 123 + ++ ++ +P + F + L I L L + + + Sbjct: 196 ERTREVIADVQRHLKGLQDAARAQTRFSPGALDMSFVVGVRDVLESIALPQLVETLAREA 255 Query: 124 PQATIKLRNWD-YDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCV 182 P + R D + G +D+ R I E + D V Sbjct: 256 PGVRLVSRRVPVADIGRELGSGNLDLAIERRVPAGP----------RIVAEHVADDTLVV 305 Query: 183 WLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 +R+DH + H+++ LD +L GR R I + + + Sbjct: 306 AMRRDHALAGAPLRRADYFAAGHVTVSPLGEPHT-LDVLLGADGRFRRIQLVCQHYFAAC 364 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 + A D LLL Y +L L LPL P WH+ + Sbjct: 365 QIVASGD-LLLTLPRSYALRMTRLLPLAAQPLPLRL-------KPYPILAYWHESRELDR 416 Query: 303 KIVWLRETIKNLYAS 317 W R+ + + + Sbjct: 417 AHQWFRQRVIEVVRA 431 >UniRef50_A0LD87 Transcriptional regulator, LysR family n=1 Tax=Magnetococcus sp. MC-1 RepID=A0LD87_MAGSM Length = 322 Score = 215 bits (549), Expect = 2e-54, Method: Composition-based stats. Identities = 77/315 (24%), Positives = 129/315 (40%), Gaps = 21/315 (6%) Query: 1 MKKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPL 60 MK ++ DLNLL+ LM ER VT+A + + +T +A+S +L +LR FDDPLFV + Sbjct: 6 MKHNLNKFDLNLLVAFDTLMTERGVTRAGRALGITQAAMSNTLRRLRELFDDPLFVKTGS 65 Query: 61 GLSPTPLMVSMEQNLAEWMQMSNLLL-DKPHHQTPRGLKFELAAESPLMMIMLNALSKQI 119 + PTP + + +A ++ L + F L +++ L + + Sbjct: 66 SMEPTPRAIELSTPVALALEEVRKALNQEGFDPMMASENFRLGMIDYASAMLMPGLVRHM 125 Query: 120 YQRYPQATIKLRN-WDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSD 178 Q P+A +++ + + + + RG VD+ FS +P + LFS Sbjct: 126 SQVAPRAKMQVVDVGGDEEVANLERGAVDLVFSR----------FQWVPPKVCINRLFSM 175 Query: 179 VPCVWLRKDHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPE 237 +HP + + ++D FL H+ D +D L E+G +R I L Sbjct: 176 EYVAVFCPNHPGVEGGSLSMDAFLASRHVHYYPRGMDNTVVDETLAEMGEKRNIIGKLAS 235 Query: 238 FEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKR 297 F M A + + + + L + LP L WH R Sbjct: 236 FGMLPAMLASSHVMAV-MPEGAAKVVARPLGLRVEKLPFKTPLL-------RMALAWHPR 287 Query: 298 NSHNPKIVWLRETIK 312 +P VW R+ +K Sbjct: 288 TDRDPSHVWFRQQVK 302 >UniRef50_Q2G901 Transcriptional regulator, LysR family n=2 Tax=Alphaproteobacteria RepID=Q2G901_NOVAD Length = 302 Score = 215 bits (549), Expect = 2e-54, Method: Composition-based stats. Identities = 66/320 (20%), Positives = 129/320 (40%), Gaps = 21/320 (6%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 LDLNLL+ LM+ RSVT+AA+RI +T A S +L +LR +F D + V + Sbjct: 1 MRFKGLDLNLLVVFDALMETRSVTRAAERIGLTQPATSAALRRLRDYFRDEIVVAVGKRM 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTP--RGLKFELAAESPLMMIMLNALSKQIY 120 PTP ++ + + ++ + P P +F + +M+ +L L ++ Sbjct: 61 HPTPFAEALHPQIQQALRRVERAISMPTEFDPSTSTRRFRIIGSDYIMVAVLVPLIERFA 120 Query: 121 QRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 + P I++ + S+ + G D+ + EVLF + Sbjct: 121 RTAPGVRIEIIQPNEHSVAELEAGRADLLVTPEPFLASWHP----------SEVLFDEEQ 170 Query: 181 CVWLRKDHPALHQTWNLDTFLRYPHISICWE-QSDTWALDNVLQELGRERTIAMSLPEFE 239 V +P + D F H+++ + D+ L +GRER + +++ F Sbjct: 171 VVVGWAQNPIFARGVTADDFYAAGHVTVAFGANRTPAFADSALSRMGRERRVEVTVGSFA 230 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 + + L + R + + L +P F Q+ + +H+ + Sbjct: 231 SAPWFIEGTSRLAV-LHERLVRQIARRFNLAWARMPFDFPTMQEM-------MQFHEARA 282 Query: 300 HNPKIVWLRETIKNLYASMA 319 + + WLR+ ++ + + A Sbjct: 283 EDAGLAWLRQQMREVASENA 302 >UniRef50_D2SB86 Transcriptional regulator, LysR family n=3 Tax=Actinomycetales RepID=D2SB86_9ACTO Length = 312 Score = 215 bits (549), Expect = 2e-54, Method: Composition-based stats. Identities = 35/308 (11%), Positives = 89/308 (28%), Gaps = 26/308 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +++ L + Q R +AA+R+++ S +S+++ +L A LF + + TP Sbjct: 1 MEIRQLQYFVAVAQTRHFGRAAERLHMAQSPLSQAIRQLEAQLGATLFDRTTRRVELTPA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQ-TPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 ++ + + + R + A L L++ + P Sbjct: 61 GEALLLDAERILGSIEAAQTRVRLVGAGRTGLLRVGATGLAAYRQLPQLARIATRELPGL 120 Query: 127 TIKLRN--WDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 ++ A+ +D+ + ++ + V + Sbjct: 121 QLRFEPDLLTPAQEQALEEDRIDLAVLRPPLRRA----------GLASRLVARERLVVAV 170 Query: 185 RKDHPALHQ-TWNLDTFLRYPHISIC-WEQSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 + H L + + A+ G + + L Sbjct: 171 PQSHRLAGDEPVRLAELRDEDFVVYGVPDSVVDGAVTQACLSAGFLPRRVHAAAQTSILL 230 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 + A L +A P ++ + L+ + ++ + + W + + Sbjct: 231 TLVAA--GLGVAVLPEAALAL-RVQGVQLIPV--------ADEVSIDLAIAWRREDPSPA 279 Query: 303 KIVWLRET 310 LR Sbjct: 280 LARLLRAL 287 >UniRef50_B3PFN1 Transcriptional regulator, LysR family n=1 Tax=Cellvibrio japonicus Ueda107 RepID=B3PFN1_CELJU Length = 306 Score = 215 bits (549), Expect = 2e-54, Method: Composition-based stats. Identities = 48/309 (15%), Positives = 88/309 (28%), Gaps = 25/309 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +D L + S ++AA ++++T A+SK +A L PLF ++ T Sbjct: 1 MDTQQLQAFVAIANTGSFSQAANQLHLTQPAISKRIALLEEQVKAPLFDRIGRQIALTQA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTP-RGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + + K +A + + L +Q Q +P Sbjct: 61 GQILLPKAKLILAEVDAAAQAVADLQGTVSGKLSIATSHHIGLHYLPPYLQQFAQDFPLV 120 Query: 127 TIKLRNWDYDSLDA-ITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + + D + + +G D+ + I L+ D Sbjct: 121 KLDVHFLDSELAHQEVVQGRFDLALVTLALE---------PDIRIASHPLWMDELQFVAA 171 Query: 186 KDHPALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 HP H QT NL Y I T + + IAM + + Sbjct: 172 PSHPLAHMQTLNLAQLSHYDAIMPDPNTYTTRLITTLFDAEHLPLNIAMVTNHLDAIKML 231 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 L P+ L+ L Q + P + H++ S + Sbjct: 232 L--GIGLGWGVLPK-----------RLLDSSLSRLALSQAAIVRPLGAIHHRQRSLSNAA 278 Query: 305 VWLRETIKN 313 + Sbjct: 279 NQFLNLLHQ 287 >UniRef50_A4FJ36 LysR-family transcriptional regulator n=2 Tax=Actinomycetales RepID=A4FJ36_SACEN Length = 287 Score = 215 bits (549), Expect = 2e-54, Method: Composition-based stats. Identities = 47/307 (15%), Positives = 88/307 (28%), Gaps = 25/307 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L +++ S T AA+ ++V SA+S S+ KL PLF + + T Sbjct: 1 MELRQLEHFLAVVRSGSFTGAAREVHVVQSALSTSIRKLETELGAPLFERTTRRVLLTEA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 ++E + + + + L + L +R+P Sbjct: 61 GRALEPMAHRIVADVVAARGEVATVAGLSRGRVAIGTIQTLTEVDLPGELGTFQRRHPGV 120 Query: 127 TIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 I +R D + A+ GE+D+ L + + + Sbjct: 121 RIHVRQGLVPDLMAAVGNGELDLA---------YLAPEGPLAEELVSFAQWRQKLVLLGY 171 Query: 186 KDHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 H + L P + + + G R + + Sbjct: 172 PGHRLAQRRRVRLAELDGEPFVDFS-GSGLQDMIGRRFADAGVRRDRVCEATHVPLLVEL 230 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 A L ++ P + LP +Q L P L NP Sbjct: 231 VAA--GLGVSIVPEPVAARSG----------LPHARIEQPSLSRPIHLAGRGAEPVNPAA 278 Query: 305 VWLRETI 311 L + + Sbjct: 279 RALLQHL 285 >UniRef50_A3IAK3 Transcriptional regulators, LysR family protein n=1 Tax=Bacillus sp. B14905 RepID=A3IAK3_9BACI Length = 304 Score = 215 bits (549), Expect = 2e-54, Method: Composition-based stats. Identities = 38/314 (12%), Positives = 101/314 (32%), Gaps = 26/314 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L + ++ + T+A + + +T S +S +++ L + L G+S T Sbjct: 12 VNLLQIEIFVKVVDMGNFTRAGEILAMTQSGISHNISSLESELGITLLNRGRNGISLTDS 71 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + +++ + + + + K + + S +L + + + Sbjct: 72 GERIIKHMRNILTEAESIKQETASILGIQNGKINIGSFSSFSSKLLPTIISRFRGEFKGI 131 Query: 127 TIKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 I + YD + + G+VDIGF+ + + + +D + L Sbjct: 132 EINFYDGSYDQITRWVEEGKVDIGFTSLSNPL----------DHLKTIPILNDRLVLTLP 181 Query: 186 KDHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 H + ++ I ++ L+E I ++ + + + M Sbjct: 182 IHHHLAINGQVKVEDLQGEAFIMPKLGCEV--SVMKFLKEQEVSPNIQFNVEDNQTIIAM 239 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 + L + P Y L + L + +++ + P + Sbjct: 240 VRE--GLGITIMPELALPY-NLQGTIVKPL--------LPEPSREISIITRSKKQSLPAV 288 Query: 305 VWLRETIKNLYASM 318 +T + + Sbjct: 289 KAFIKTTMDCVKDL 302 >UniRef50_Q01RY1 Transcriptional regulator, LysR family n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q01RY1_SOLUE Length = 307 Score = 215 bits (549), Expect = 2e-54, Method: Composition-based stats. Identities = 37/282 (13%), Positives = 82/282 (29%), Gaps = 19/282 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++ L +++ +E S T+AA+R+ +T AV+ + L LF + + TP Sbjct: 1 MEPIRLRVFRIVAEELSFTRAAERLFLTQPAVTMQVKNLEEELGLRLFDRTGQRIVLTPA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 ++ + + L A + + +L L+ + +P Sbjct: 61 GRILDDYTKRIAALCGDAERDLAVLKGETRGRLALGASTTIAQYLLPRLAGEFLAAFPAI 120 Query: 127 TIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + + D + A+ G + +G + + E D + Sbjct: 121 QFSIISGNTSDIVAALADGRIGLGLIEGPAGRS----------DVKCEPFVEDEIVLVTP 170 Query: 186 KDHPA-LHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRE---RTIAMSLPEFEQS 241 H + I ++ L+ + I + L E Sbjct: 171 PAHEFAAGGELDPAALKAASIILREHGSGTRQVVEEALKRARLDTRGLKITLELDSTESI 230 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQ 283 A + R+ L L +P+ ++ Sbjct: 231 KSAIAAGLGVG--FVSRWALGKEIALGL-LRTVPVKGLRIRR 269 >UniRef50_D1ABG1 Transcriptional regulator, MarR family n=2 Tax=Streptosporangineae RepID=D1ABG1_THECD Length = 327 Score = 215 bits (549), Expect = 2e-54, Method: Composition-based stats. Identities = 51/310 (16%), Positives = 101/310 (32%), Gaps = 19/310 (6%) Query: 13 LLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSME 72 L L + + S+T AA++++ TPSA+S+ LAKL PL V + G PT + Sbjct: 8 LRALVAVSRAGSITAAAEQMSFTPSALSQQLAKLEQEGGCPLLVRTASGAHPTEAGRVLL 67 Query: 73 QNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNALSKQIYQRYPQATIKLR 131 ++ + + R + + +L + P + L Sbjct: 68 RHAERVLGELRDAEEAVRTAAGRQPQHLSVGTFASAGKTLLPEALAAFRRVNPGVRLSLL 127 Query: 132 NW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPA 190 + D +T ++D+ + R + E+L +D V L +HP Sbjct: 128 DLEPPRGYDLVTSRDLDLLVTHRYPGGSLPAA-----PGLRRELLLTDPLLVVLPPEHPL 182 Query: 191 LHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQPD 249 + + IS + L+ V + G A ++E +L + A Sbjct: 183 ADRPAVSFADLADEEWISGEPGVHNRVCLETVAAQTGVPVRTAYETHDYEVTLALIAA-- 240 Query: 250 NLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWLRE 309 + +A P + L + L ++ +R L Sbjct: 241 GIGVALVPSTALRHTASPAFAARPL-------RGLSLAREIYIVHRRR--PPRLAADLLG 291 Query: 310 TIKNLYASMA 319 ++ ++ Sbjct: 292 ILQRFAGELS 301 >UniRef50_C2ANJ1 Transcriptional regulator, COG0583 n=1 Tax=Tsukamurella paurometabola DSM 20162 RepID=C2ANJ1_TSUPA Length = 309 Score = 215 bits (549), Expect = 2e-54, Method: Composition-based stats. Identities = 44/310 (14%), Positives = 88/310 (28%), Gaps = 23/310 (7%) Query: 13 LLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSME 72 L+ L + +T AA ++++ +S+SLA++ PLF L Sbjct: 15 LVRFITLAETAHMTDAAALLHISQPTLSRSLARMETDLGTPLFDRRHGRLVLNASGEIYL 74 Query: 73 QNLAEWMQMSNLLLDKPHHQT-PRGLKFELAAESPLMMIMLNALSKQIYQRYPQATIKLR 131 + + P LA + M+ L P+ T +L Sbjct: 75 DHARRAHAELEAARAQIADLKNPSQGTIRLAFLHSFGVAMVPQLVSAFRACEPRVTFELS 134 Query: 132 NWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPA 190 + ++ D + E D+ + + +++L + + HP Sbjct: 135 QFAAGTITDLVLADEADLAIVSPRPTTSA----------VAWQLLTVQRLALAVPSGHPL 184 Query: 191 L-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQPD 249 + +L I++ E L+ G IA E + A Sbjct: 185 ANRSSVHLSEASDADFITMHPEYGLRRILEERCAAAGFRPRIAFESSESFTVAGLVAA-- 242 Query: 250 NLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWLRE 309 L +A P + + PL+ L ++W + + R+ Sbjct: 243 GLGVALLP--------MDRNPLLPSGLTLVPMAGPAPTREVGIIWRPDVALPRAVRSFRD 294 Query: 310 TIKNLYASMA 319 Sbjct: 295 HAIEQSDRPG 304 >UniRef50_Q5LR91 Transcriptional regulator, LysR family n=3 Tax=Rhodobacterales RepID=Q5LR91_SILPO Length = 310 Score = 215 bits (549), Expect = 2e-54, Method: Composition-based stats. Identities = 41/314 (13%), Positives = 94/314 (29%), Gaps = 22/314 (7%) Query: 7 TLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTP 66 + L L L+ +AA+ + ++ ++S +A L L GL TP Sbjct: 4 DITLRQLSYFSTLVAAGQYRRAARSLGISQPSLSLQIAALEKAVGARLLERRRSGLILTP 63 Query: 67 LMVSMEQNLAEWMQMSNLLLDKPHHQ-TPRGLKFELAAESPLMMIMLNALSKQIYQRYPQ 125 + + +A ++ L L + + +L + +Q++++YP+ Sbjct: 64 EGRDVSEMVARILREVEALTLYASPMRDNMTGTLRLGSTPTIGPYLLPRVLRQLHRQYPR 123 Query: 126 ATIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 + +R+ D ++ + G D+ + I LF + + + Sbjct: 124 LKLAIRDGAPRDLVEDLAAGRYDLILTHLPVSR----------DDIRVAPLFREPLELAV 173 Query: 185 RKDHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 H T +S+ + + + + G + + Sbjct: 174 DPAHRLAGATQVRQADLAGETMLSLSSGYALHGQVQALCESAGARLSTEFEGTSLDALRQ 233 Query: 244 MAAQPDNLLLATAPRY-CQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 M + + P + +V PL + + L W + P Sbjct: 234 MV--SLGMGITLLPALYVASEVRTRGADVVTRPL------RPAIHRIVGLAWRTASGTPP 285 Query: 303 KIVWLRETIKNLYA 316 I E + + Sbjct: 286 AIERFTELTRQVIR 299 >UniRef50_A4F849 LysR-family transcriptional regulator n=7 Tax=Actinomycetales RepID=A4F849_SACEN Length = 301 Score = 215 bits (549), Expect = 2e-54, Method: Composition-based stats. Identities = 48/313 (15%), Positives = 94/313 (30%), Gaps = 23/313 (7%) Query: 7 TLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTP 66 +D L+ + +E S+T+AA+R+ V+ A++K + +L A LF S G++PT Sbjct: 2 DVDTRLVRYFAAVAEEGSLTRAAERLYVSQPALTKQIKQLEALLGVRLFTRSRTGMAPTE 61 Query: 67 LMVSMEQNLAEWMQMSNLLLDKPHH-QTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQ 125 + + + + L + + + + P Sbjct: 62 AGQVLAERAPALLATCDEALRDTKSAARRAARVLRIGFLASAANEPTQDIIARFGVVRPG 121 Query: 126 ATIKLRNWD-YDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 + +R + ++ GEVD + + EVL ++ CV L Sbjct: 122 WRVDMRQAAWSEPTAGLSEGEVDAALLRLPFPGQEA---------LRVEVLLTEPRCVAL 172 Query: 185 RKDHPAL-HQTWNLDTFLRYPHISICWEQS-DTWALDNVLQELGRERTIAMSLPEFEQSL 242 +HP P ++ E + GR I S + + L Sbjct: 173 PANHPLATRDAIPFRELWDEPFVAAPPETGAFRDYWLAADERDGRPPRIGASTDQPDDWL 232 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 A + +A AP + + + ++W NP Sbjct: 233 QAIA--NGYGVALAPESAARFYSRPGVVYRPV--------IGVSPSRVGIVWPPAADTNP 282 Query: 303 KIVWLRETIKNLY 315 + Sbjct: 283 VVQDFVACCLEAV 295 >UniRef50_B5G8L5 Transcriptional regulator n=3 Tax=Actinomycetales RepID=B5G8L5_9ACTO Length = 301 Score = 215 bits (549), Expect = 2e-54, Method: Composition-based stats. Identities = 42/314 (13%), Positives = 95/314 (30%), Gaps = 18/314 (5%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++ L L+ + S + AA+ + T AVS+ + L PL V + + T Sbjct: 2 IEARHLRVLRAVATTGSFSAAARTLGCTQPAVSQQMKALEGAAGTPLLVRTGREMRLTEA 61 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNALSKQIYQRYPQA 126 ++ ++ + + ++ + L + ++ + + + +P Sbjct: 62 GEALSRHASGILAGLTAAEEEVAAIAGLRAGRVRLVSFPSGSSSLVPSALAALRRDHPGT 121 Query: 127 TIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + L S++ + G+ DI + R + L D + Sbjct: 122 RVSLEEAEPPRSVELLREGDFDIALAFRYGTEADDSAREW--EGLVVRPLLRDRLVGLVP 179 Query: 186 KDHPALHQ--TWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 + H + + F R P I+ C L V E G I + ++ Sbjct: 180 EGHRLDGRAGPVGIAEFAREPWIAGCPRC--RTQLVKVCAEAGFTPRIDFATDDYPAVHA 237 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 + A L +A P + + + L + L + P Sbjct: 238 LVAA--GLGVAVLPALALESVRPEGVRTLTL--------TPSVRREIVALTLPDLATVPT 287 Query: 304 IVWLRETIKNLYAS 317 + + ++ Sbjct: 288 VAATLDRLERAARR 301 >UniRef50_A4EJ78 Transcriptional Regulator, LysR family protein n=1 Tax=Roseobacter sp. CCS2 RepID=A4EJ78_9RHOB Length = 294 Score = 215 bits (548), Expect = 2e-54, Method: Composition-based stats. Identities = 39/310 (12%), Positives = 87/310 (28%), Gaps = 28/310 (9%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 + L +L +E +AA+++++ A+S + L LF + + T Sbjct: 1 MTLRQFQIFTVLAEELHFGRAAEKLHLAQPALSNHIKALEYDLGVTLFHRTTRRVRLTAA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRGL--KFELAAESPLMMIMLNALSKQIYQRYPQ 125 + + + + +L +L ++ + P+ Sbjct: 61 GEAFLPEALATIAQAEAAVRITRAM-GETGADTLKLGGVDSATAGLLPSVIRSFRLARPE 119 Query: 126 ATIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 +K+ + + + +DI F + H + L S+ V L Sbjct: 120 VALKVFEMLSGPAFNMLESQALDIAFVRKPPHV----------DHLSSRHLMSEPVMVAL 169 Query: 185 RKDHPALHQ-TWNLDTFLRYPHISICWEQS--DTWALDNVLQELGRERTIAMSLPEFEQS 241 HP Q + + + + + L+ I E Sbjct: 170 PAQHPKARQHSISTADIREEQLVMSSRASRPILFDVIMDYLRNRDVTPNILQEATERHMI 229 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 + M A L ++ P++ + + +V LPL V +W Sbjct: 230 IAMVAS--GLGISLVPKWVSNFRRED---VVFLPLD-----DGGPAVEVHAVWRTGEQLQ 279 Query: 302 PKIVWLRETI 311 + Sbjct: 280 TVHD-FLSFL 288 >UniRef50_Q0JZR1 Transcriptional regulator, LysR-family n=8 Tax=Proteobacteria RepID=Q0JZR1_RALEH Length = 311 Score = 215 bits (548), Expect = 2e-54, Method: Composition-based stats. Identities = 52/313 (16%), Positives = 96/313 (30%), Gaps = 19/313 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 + L + + AA +V+ SA++ ++ L LF P G++ T Sbjct: 15 VTLRQFRYFVAAAETGQFSMAATAEHVSQSAITNAVLALEQRLAVRLFERRPHGVTLTAE 74 Query: 68 MVSMEQNLAEWMQMSNLLLDKPH-HQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 Q+ + + L +P LAA ++ L L + YP Sbjct: 75 GHLFFQHARQILDSVEDALREPRFQVHGLQGSVRLAASYTVLGYFLPGLLARFRTNYPDI 134 Query: 127 TIKLRNWD-YDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + L + D D A+ GE+++G + P L +W Sbjct: 135 ELDLLDMDRPDIERAVLAGEIELGI--------ALLSNLERPQRFQRHTLMRSRRQLWTS 186 Query: 186 KDHPALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 HP L + +L YP+I I +++ + + +A E + Sbjct: 187 SSHPLLAVERPSLRDIAAYPYILITVDEA-EESTLRYWRSHRLAPKVAFRTGSMEALRGL 245 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 A + L + A P+ ++ +LW Sbjct: 246 VAH--GFGVTVLSDMVYRPWSLEGKQIEARPIA-----NAVPDMEVGMLWQPGRKLGKPA 298 Query: 305 VWLRETIKNLYAS 317 LRE + + S Sbjct: 299 DALREFLIHACGS 311 >UniRef50_A2SDX3 Transcriptional regulator, LysR family n=6 Tax=Burkholderiales RepID=A2SDX3_METPP Length = 326 Score = 215 bits (548), Expect = 2e-54, Method: Composition-based stats. Identities = 79/324 (24%), Positives = 130/324 (40%), Gaps = 27/324 (8%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 ++L+L+ L ++ ERSV++AA R+ T AVS L +LRA DPL V S G++P Sbjct: 7 FDKIELHLVRVLHTVITERSVSRAALRLRTTQPAVSAQLKRLRALVGDPLLVRSGTGMAP 66 Query: 65 TPLMVSMEQNLAEWMQMSN-----LLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQI 119 T + + + + AE ++ + F +AA L L AL ++ Sbjct: 67 TAVALQLLEPAAELLRNAERLFGSRAEALAFDPAHSETTFRVAASDYLDPQFLPALVTRL 126 Query: 120 YQRYPQATIKLRNWDY--DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFS 177 P +++ D + RGEVD+ P + L S Sbjct: 127 RAEAPGIRVEVLPLSAEFDYRKGLARGEVDLVIG----------NWLRPPAELHLGRLLS 176 Query: 178 DVPCVWLRKDHPALH--QTWNLDTFLRYPHISICW-EQSDTWALDNVLQELGRERTIAMS 234 D + +DHPA+ ++W + +L HI+ +D L LG R I + Sbjct: 177 DEIVCLVAEDHPAVKSPRSWTAERYLASEHIAPTPLHPGARGVIDEHLDALGLARDIVVR 236 Query: 235 LPEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLW 294 P F M A +L +Y QL L +V P+PF + LW Sbjct: 237 SPYFGLGPQMVAHSRLVLTTGRLFCSRYVGQLPGLRIVRCPVPFPALV-------YYQLW 289 Query: 295 HKRNSHNPKIVWLRETIKNLYASM 318 H+ + + WLR ++++ + Sbjct: 290 HELSHQSAAGRWLRGVMRDVARGL 313 >UniRef50_C5ALH3 Transcriptional regulator, LysR family protein n=1 Tax=Burkholderia glumae BGR1 RepID=C5ALH3_BURGB Length = 302 Score = 215 bits (548), Expect = 2e-54, Method: Composition-based stats. Identities = 52/320 (16%), Positives = 103/320 (32%), Gaps = 30/320 (9%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L + +E + T+AA+R ++ SA+S S+ L L V + +S + Sbjct: 1 MELRQLRHFVAVAEEANFTRAAERCHIVQSALSTSIRLLEEELGARLLVRTTRRVSLSAA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTP-RGLKFELAAESPLMMIM-LNALSKQIYQRYPQ 125 + + + + + T R K + L + L AL + Y +P Sbjct: 61 GAVFLDSARRALDILDRAGLEVADITSVRRGKLSIGTVQSLPQFLELPALLSRFYHAHPG 120 Query: 126 ATIKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 ++L L + + E+D+ + + V+ D + Sbjct: 121 VEVRLVQGGAAELNEKVDARELDLAILP----------IEERNERLASHVIACDEMVLAC 170 Query: 185 RKDHPALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 R+DHP L + + Q +D E G +R +A + + + L Sbjct: 171 RRDHPLAASGQVPLSRLTKQAFVDFVPGQGTRRLVDRGFAEAGLQRRVAFEIGDLDTLLE 230 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRN----- 298 + Q L +A P + L +Q +L + Sbjct: 231 LVRQ--GLGVALLPE--------DIVVRRPDMLACVRLEQTQLCWELVVTHAASAAGDAP 280 Query: 299 -SHNPKIVWLRETIKNLYAS 317 +P V + + A Sbjct: 281 DPLDPAPVAFLDMLMAETAG 300 >UniRef50_A7HRT9 Transcriptional regulator, LysR family n=1 Tax=Parvibaculum lavamentivorans DS-1 RepID=A7HRT9_PARL1 Length = 315 Score = 215 bits (548), Expect = 2e-54, Method: Composition-based stats. Identities = 63/319 (19%), Positives = 121/319 (37%), Gaps = 22/319 (6%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 +I LDLNLLL + ERS++KAA ++ +T AVS +L +LR + D LF S G+ Sbjct: 1 MNIRELDLNLLLVFNAIYTERSISKAAVKLGITQPAVSNALRRLRNFTGDTLFYKSGSGV 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPR--GLKFELAAESPLMMIMLNALSKQIY 120 +PT ++ + + L P F + + ++ AL Sbjct: 61 APTRAAATLAIPIGHALDTVERGLSSVRSFDPATSRRTFRIGVNDIIHDALVPALVGYTR 120 Query: 121 QRYPQATIK-LRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 + P ++ ++ +L+ + GE+D+ ++ ++ ++ D Sbjct: 121 REAPNLILEFVQQVGDRALEMLKGGEIDMALLP----------NFAIDDSLVSTKVWDDS 170 Query: 180 PCVWLRKDHPALHQ-TWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEF 238 + + ++HP +D + Q +D+ + G ER A ++ + Sbjct: 171 FAIIVARNHPIAKSNRLTVDDIRELRFVVTTHVQRLRTFIDSAFRANGMERVTACAVADT 230 Query: 239 EQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRN 298 + A D L + YN L + LP + Q + + W K Sbjct: 231 HNIYPLVAVSD-LAACVGRFHADRYNTDGSLVMFDLPFELPKIQGR-------IAWAKEA 282 Query: 299 SHNPKIVWLRETIKNLYAS 317 + W+RE + + S Sbjct: 283 DEDEGHRWVRERVLEILHS 301 >UniRef50_B8IW67 Transcriptional regulator, LysR family n=1 Tax=Methylobacterium nodulans ORS 2060 RepID=B8IW67_METNO Length = 316 Score = 215 bits (548), Expect = 2e-54, Method: Composition-based stats. Identities = 39/316 (12%), Positives = 98/316 (31%), Gaps = 22/316 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +D L +++ S++KA++ + V A+S+ LAKL PL S G++PT Sbjct: 1 MDFRQLRYFAQIVESGSLSKASRNLYVAQPALSQQLAKLEDEVGKPLLHRSTRGVTPTEN 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 +++ + ++ + L ++ + + + ++ + L ++I +YP Sbjct: 61 GLALYHHARFMLRQLDQALSIARQESGQIEGMVSIGLPATTVLAIGTPLVRRIRTKYPGI 120 Query: 127 TIKLRN-WDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + + I ++D+ S + + VL + V L Sbjct: 121 MLNVVEGMSGHLTHMIRLCQLDLAILF----------NSDVASDLPSTVLLDEELFVILP 170 Query: 186 KDHPAL---HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 + P + + + P I + +E + + + Sbjct: 171 SNSPLVPHDRTSITIAEAAALPLILPTGTHGLRRRISAEFEERNLTAHVVAEIDSLSLVM 230 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 D + P + AL + ++ + +P Sbjct: 231 SCV--YDGIGATIKPISSLQLGGKRRKEWRALSISDARLSRRNYLYSINA-----DLLSP 283 Query: 303 KIVWLRETIKNLYASM 318 + ++ + Sbjct: 284 AASVVANEVRETARHL 299 >UniRef50_C6XSY8 LysR substrate-binding n=12 Tax=Bacteroidetes RepID=C6XSY8_PEDHD Length = 307 Score = 215 bits (548), Expect = 2e-54, Method: Composition-based stats. Identities = 49/319 (15%), Positives = 108/319 (33%), Gaps = 30/319 (9%) Query: 7 TLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTP 66 ++L L Q+L +E KAA+R+ ++ +S+ + ++ F+ LF S + T Sbjct: 4 QIELRHLKYFQVLAEELKFRKAAERLFISQPGLSRQIMQMEEIFNVALFDRSKKKVELTA 63 Query: 67 LMVSMEQNLAEWMQMSNLLLDKPHHQ-TPRGLKFELAAESPLMMIMLNALSKQIYQRYPQ 125 + ++ + + + + R + + + ++ L + + YP Sbjct: 64 AGLYLKDEVDFLFNHLETVKRQLDNIGQGRETELRIGFLGSAVQKIVPELVLGLNKEYPG 123 Query: 126 ATIKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 L ++ + + ++D+GF L LP I ++ + + L Sbjct: 124 IQTILDEMPNKMQIELLEKDKLDLGFVR----------LHRLPEGISRHLVQQETFSLVL 173 Query: 185 RKDHPALH---QTWNLDTFLRYPHISICWEQS--DTWALDNVLQELGRERTIAMSLPEFE 239 K HP + F P I E S + ++ ++ G + Sbjct: 174 PKQHPINEFNFKGI--AEFSNEPFIFFSSEDSPFYHDLITSICEDHGFRPKVFHRSVNAL 231 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 + + + LA P QY L + F E + + W N Sbjct: 232 TIFKLIEE--GMGLAIVPTSLQYGYN--------LNVRFIELKNIPQRTELYVAWKASN- 280 Query: 300 HNPKIVWLRETIKNLYASM 318 NP + + + ++ + Sbjct: 281 RNPALKNVIKLLRKSIPEL 299 >UniRef50_Q1QYT3 Transcriptional regulator, LysR family n=1 Tax=Chromohalobacter salexigens DSM 3043 RepID=Q1QYT3_CHRSD Length = 317 Score = 215 bits (548), Expect = 2e-54, Method: Composition-based stats. Identities = 48/315 (15%), Positives = 112/315 (35%), Gaps = 20/315 (6%) Query: 7 TLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTP 66 L L L L R++ +AA+R+ ++ A SK L +L LF P G++P Sbjct: 13 RLKLRHLQLFIALDDLRNLHRAAERLGMSQPAASKLLGELEGQLGLALFERHPRGITPNW 72 Query: 67 LMVSMEQNLAEWMQMSNLLLDKPHHQ-TPRGLKFELAAESPLMMIMLNALSKQIYQRYPQ 125 ++ ++ + + D+ + + + +L + +++++ P Sbjct: 73 YGETVIRHARGILSSLHQAGDELNALQAGSAGSVSVGTVMAPAVTLLTSAVERVHRDRPN 132 Query: 126 ATIKL-RNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 + + + ++ + + GE D + S + +E + + C Sbjct: 133 LKVSIDVDVSHELIPRLVEGEFDFAIARIPSTLPAG--------DFVFEEIGEEALCFVC 184 Query: 185 RKDHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRE-RTIAMSLPEFEQSL 242 R HP +T NL+ + YP + +D++ G + P+ +L Sbjct: 185 RAGHPLADRTSLNLEAMVEYPWVLQPPGALMRQRVDHLFLHHGVALPRQIIDTPDILVAL 244 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 M + D + + T + + + ++ P P+ L+ + +P Sbjct: 245 AMVDKSDTVTVTT-RQVAELLCDQPRFRILPFPEALSVQ-------PYGLVSLREQRLSP 296 Query: 303 KIVWLRETIKNLYAS 317 L +++L Sbjct: 297 GAAALMSALRDLIRE 311 >UniRef50_A4EQ42 Transcriptional regulator, LysR family protein n=1 Tax=Roseobacter sp. SK209-2-6 RepID=A4EQ42_9RHOB Length = 330 Score = 215 bits (548), Expect = 2e-54, Method: Composition-based stats. Identities = 40/318 (12%), Positives = 90/318 (28%), Gaps = 21/318 (6%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVN-SPLGLS 63 +T + L Q + ++ + AA+ V+ A+++++ KL LF G+ Sbjct: 26 MTRITLRQCAYFQAVARKGGIAAAAETAGVSQPAIAQAITKLEDLTGLVLFRRLHARGME 85 Query: 64 PTPLMVSMEQNLAEWMQMSNLLLDKPHHQT-PRGLKFELAAESPLMMIMLNALSKQIYQR 122 TP ++ + + +++ + R L L L + ++ Sbjct: 86 LTPQGREFLRHADQLLALADQMDMAVEDIAQQRRGTLRLGCFQSLAPFFLAQILTGYQRQ 145 Query: 123 YPQATIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPC 181 P + L + A+ E+D+ + L P Sbjct: 146 APDVVLNLSEMLQEELTTALQENELDLAILYDLGLDARL---------FNIHPLAEPQPY 196 Query: 182 VWLRKDHPALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQ 240 + + + HP ++ + QS + IA E Sbjct: 197 LIVPQGHPLAGQDRVSIRALDGEDFVLFDAPQS-REYFHAQFAHHEIKPRIAYRSASIET 255 Query: 241 SLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 A + L L+ +V + + P + + Sbjct: 256 VRSYVA--NGLGLSILSMRPVSDLTYEGKSVVPV-----ALTEGFGATPIVIATRAGVAE 308 Query: 301 NPKIVWLRETIKNLYASM 318 + + L + L+A + Sbjct: 309 DALLAPLIAFCQELFAEL 326 >UniRef50_A1ZLC1 Transcriptional Regulator, LysR family n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZLC1_9SPHI Length = 301 Score = 214 bits (547), Expect = 3e-54, Method: Composition-based stats. Identities = 48/316 (15%), Positives = 105/316 (33%), Gaps = 27/316 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L + +L E + ++AAK+++++ +S+ + L A LF + + T Sbjct: 1 MELKHVEYFFVLANELNFSQAAKKLHISQPPLSRHIKALEAELGTTLFYRNTQSVRLTKE 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQ-TPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + + K + ++ P M++ L L K Q +P Sbjct: 61 GELFYEEAKALLSQVKGAVSKLKTIVKSAPTQVQIGFVRPAMLLFLPGLLKTFRQSHPHI 120 Query: 127 TIKLRNWD-YDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 + + + ++ + ++D F +SL + Y +FS+ + + Sbjct: 121 QVNITEINYPETTKSMLLNNQLDAAF----------SHSASLCNDLVYHQVFSEQLKLVM 170 Query: 185 RKDHPALH-QTWNLDTFLRYPHISICW--EQSDTWALDNVLQELG-RERTIAMSLPEFEQ 240 +HP + Q +L I + + E G + M Sbjct: 171 LPNHPLANCQEISLGELKDEQFIFFPRKLSPTLYDLFISACFEQGNFHPNVWMEATPPLA 230 Query: 241 SLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 + + AQ + LA Q+ +V + ++ P L+W+ H Sbjct: 231 RVELVAQGMGVSLA-----AASLEQMFVGKVVFKNI----VSTPWVQFPIDLVWNPHFQH 281 Query: 301 NPKIVWLRETIKNLYA 316 I + K A Sbjct: 282 -QVIQVFVDFAKKYMA 296 >UniRef50_C8WE41 Transcriptional regulator, LysR family n=4 Tax=Zymomonas mobilis RepID=C8WE41_ZYMMN Length = 304 Score = 214 bits (547), Expect = 3e-54, Method: Composition-based stats. Identities = 45/322 (13%), Positives = 108/322 (33%), Gaps = 28/322 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +D+ L + + KAA+++ +T +S+S+ L LF+ + ++ TP Sbjct: 1 MDIRQLRHFLAVAENLHFGKAAEQLGITQPPLSQSIMALEKELGIALFIRNKRHVALTPF 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQ-TPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + + + L +L+ S +L L ++ YP Sbjct: 61 GEAWRDYVEAALNEVDALPQIAERLKEGSKGHLDLSFVSTADFNILPILVRRYRALYPDV 120 Query: 127 TIKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + L D + +T+G G LP ++ Y+ L S+ + Sbjct: 121 ELSLSEATSDLQISDLTKGLRHAGIIIPPRSSE-------LPSSLSYKKLVSEPLIAAVP 173 Query: 186 K------DHPALHQTWNLDTFLRYPHISICWE--QSDTWALDNVLQELGRERTIAMSLPE 237 +++ + ++ + P I + + + Q G IA + Sbjct: 174 ALWIKEQRLSLVNRKLSPNSVRQAPLIIFPRHFAPAFYDIVMDYYQACGGYPNIAQQAIQ 233 Query: 238 FEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKR 297 + + + A + +A PR ++ + + + E Q+ + + W K Sbjct: 234 MQTIISLVAAS--MGIAIVPRSLRHMARR--------DVRYIELQKPAALLETGIAWRKD 283 Query: 298 NSHNPKIVWLRETIKNLYASMA 319 P + + + +++ Sbjct: 284 -DQTPTLTRFLDVTHEMLDAIS 304 >UniRef50_Q0S956 Transcriptional regulator, LysR family protein n=3 Tax=Actinomycetales RepID=Q0S956_RHOSR Length = 299 Score = 214 bits (547), Expect = 3e-54, Method: Composition-based stats. Identities = 38/314 (12%), Positives = 93/314 (29%), Gaps = 24/314 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L + +E + T+AA+R++++ S +S + +L L S + T Sbjct: 1 MELRQLEYFVAVAEEANFTRAAERVHISQSGISAQIRQLEHDLGATLIDRSSRTATLTAA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + + ++ + + + + + L + +P Sbjct: 61 GEAALVHARAALASADAMRQAVDDVNQLIRGRLVVGMVTACTVKPLFDALSAFHVAHPGI 120 Query: 127 TIKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 I L D ++ + G +D+ G ++ P +D + S+ + Sbjct: 121 EITLTEDSSDRLVERVRAGAIDLALVG---------TATAPPDGLDAFPIISEGLVAAVP 171 Query: 186 KDHPALHQ-TWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 HP + L + + + D G IA+ + + Sbjct: 172 PGHPLAGRSRVTLAELGDHAIVCMPTGTGIRTVFDQACAAAGLRPDIALQASAPDAVADL 231 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 L +A + L + L+W ++ P + Sbjct: 232 --AIRGLGVAILSESMATDYRGR--------LTAVTLDDVDIPAVLALVW--KSLAGPAL 279 Query: 305 VWLRETIKNLYASM 318 L + + + Sbjct: 280 RELVLHTRRTFGEV 293 >UniRef50_UPI00017458E6 transcriptional regulator, LysR family protein n=1 Tax=Verrucomicrobium spinosum DSM 4136 RepID=UPI00017458E6 Length = 292 Score = 214 bits (547), Expect = 3e-54, Method: Composition-based stats. Identities = 38/310 (12%), Positives = 86/310 (27%), Gaps = 25/310 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +DL L +++ T A+ ++ +T ++S+ + +L L + T Sbjct: 1 MDLRSLGVFVEVVRRGGFTAASSKVALTQPSISRVIKQLEEDIGQVLITRQHRSIVLTDA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + ++ ++ L + L + + L K+ + YP Sbjct: 61 GKILFRHAQNLLRDHAALETELADLAGLKRGVLTLGIPPLSGTLFVP-LIKRYKKTYPDI 119 Query: 127 TIKLRN-WDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + L + A+ ++ +G D F D + Sbjct: 120 ELVLFEKGSKATERALLAADMQLGTLILPLDSALY----------DSVPFFHDRLALAAP 169 Query: 186 KD-HPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 + H A ++ L P I + + + N G IA S F + Sbjct: 170 RHSHWATRESVKLKELKDEPFIIFPEDFALNDTVRNACAAAGFTPEIAASSSHFSLIAGL 229 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 + +A P + + ++ + W + + Sbjct: 230 IDS--GVGIALLPMSVVRGTNA---------VAVIRLEDPDIQWNIAIAWCRDFYLSHAA 278 Query: 305 VWLRETIKNL 314 L +K Sbjct: 279 KALVNLVKAH 288 >UniRef50_C7QF45 Transcriptional regulator, LysR family n=1 Tax=Catenulispora acidiphila DSM 44928 RepID=C7QF45_CATAD Length = 307 Score = 214 bits (547), Expect = 3e-54, Method: Composition-based stats. Identities = 33/312 (10%), Positives = 84/312 (26%), Gaps = 22/312 (7%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 +T L+L+ L +++ + AA+++ ++ +VS + L L S + P Sbjct: 1 MTQLNLHRLSIFLTVVETGGFSAAAQKLYMSQPSVSNHVRNLEQSLQTTLIDRSGPRIRP 60 Query: 65 TPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNALSKQIYQRY 123 T + + ++ + + + E+ + + +L L + +R+ Sbjct: 61 TAEGEVLAEYARRIFLLTEEAVAAIREVSGVQSGRLEVGGTTTVGTYLLPRLLARFRERH 120 Query: 124 PQATIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCV 182 + + L + GE+ + + + E + + + Sbjct: 121 QNIECDIVVGNNGQILKRLLDGELGLAIVAGQPAAPQ----------LKTETVLDERLLL 170 Query: 183 WLRKDHPALHQT--WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQ 240 HP H T + + L + + E Sbjct: 171 VAAPGHPLTHPTPHITAPQLAGERFLLREPGSQTRDLQEAALINWDLDDMPKADMWGPET 230 Query: 241 SLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 A L ++ + L E P + + + Sbjct: 231 IKQSVAA--GLGISLISEHAIDTEVKDG------RLAVLEVDPPLRSRPVVIAYRRDRLL 282 Query: 301 NPKIVWLRETIK 312 +P + Sbjct: 283 SPAERAFVALAR 294 >UniRef50_C0ZAD7 Transcriptional regulator n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZAD7_BREBN Length = 289 Score = 214 bits (547), Expect = 3e-54, Method: Composition-based stats. Identities = 45/314 (14%), Positives = 93/314 (29%), Gaps = 28/314 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 + L + L + + T+A ++I ++ S VS ++ L LF + G+ T Sbjct: 1 MTLFQMEVLVAVTNAGNFTRAGEQIGLSQSGVSHTIGALEKELGISLFTRNRSGVKLTAA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQ-TPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + ++ +L+ +A+ + +L L K I YP Sbjct: 61 GEKIVTSARIILENVSLIKQVAAESGEHLEATLRIASFPSVTAQLLPKLLKSIESHYPHM 120 Query: 127 TIKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 KL Y + + I G VD+GF ++ +L +D + Sbjct: 121 QTKLYEGSYQEIKEWIRSGVVDVGFHVWP------------DDELEGILLTTDALHAVVP 168 Query: 186 KDHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 HP + L+ R + + + G T++ + + L M Sbjct: 169 AQHPLAKEPSLTLEQLARESFLMPMAGCHL--LIGAEFAKAGLTPTVSYEIADNTTILAM 226 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 + + P LP + L L + Sbjct: 227 VES--GVGVTIVPSLTLPTQ---------LPDVAVKEITPPLSRQIGLAVRSLREAPSAV 275 Query: 305 VWLRETIKNLYASM 318 + + ++ Sbjct: 276 QAFLREAERIAPTL 289 >UniRef50_Q123J4 Transcriptional regulator, LysR family n=1 Tax=Polaromonas sp. JS666 RepID=Q123J4_POLSJ Length = 303 Score = 214 bits (547), Expect = 3e-54, Method: Composition-based stats. Identities = 40/313 (12%), Positives = 94/313 (30%), Gaps = 22/313 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L+ + + ++ S T AA+ ++ + VS+ +++L LF SP L+PT Sbjct: 2 MNLSQVEAFRAVVLSGSTTAAARVLHTSQPNVSRLISQLEKAIGLLLFERSPGKLTPTEE 61 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTP-RGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 ++ + L + + +AA S + +L K+ Q +P+ Sbjct: 62 GLTFFTEVQRSFLGLERLDETADKIRRFGTGELRIAAVSTIAFGLLPRAIKRFAQDHPEV 121 Query: 127 TIKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 I + + + D+G + S VL+ + Sbjct: 122 GISIHMGHSSVISQWVDSHFCDLGIVSQLSRQDISTEPD---------VLYRIDGVCLMP 172 Query: 186 KDHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 ++H + IS ++D + + G +R I + + Sbjct: 173 ENHRLAEKKRLTPMDLEGETFISSAKPDELRKSVDRIFDQAGVKRIINIETSYSSIIWSL 232 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 + ++ + + L+ K N + Sbjct: 233 V--GLGMGISIVNPLAVQDYRSAPVVTRPFDPALPYEGI--------LIIPKGRPANRLV 282 Query: 305 VWLRETIKNLYAS 317 E ++ + Sbjct: 283 AKFSEVLRQIARE 295 >UniRef50_D1UNR7 Transcriptional regulator, LysR family n=1 Tax=Burkholderia sp. CCGE1001 RepID=D1UNR7_9BURK Length = 314 Score = 214 bits (547), Expect = 3e-54, Method: Composition-based stats. Identities = 44/306 (14%), Positives = 89/306 (29%), Gaps = 26/306 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 LDL + C E + +AA R+++T +S+ + L LF + T Sbjct: 2 LDLGQVRCFVAAATELNFRRAAARLHMTQPPLSRQIQLLEDNLGVKLFERVGRTVKLTTE 61 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQT-PRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + + ++ + + + L ++ L P+ Sbjct: 62 GRVFLADASRLLNLAEQAESTVRRASKGKTGRVRLGFTGAAGYELIPELLVAAADALPEV 121 Query: 127 TIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + L ++A +D+GF + +++ + + V L Sbjct: 122 DVVLLELVSAAQIEAFAANAIDLGFLRPLPSRQK----------LEFVRVDEEPLIVALP 171 Query: 186 KDHPA-LHQTWNLDTFLRYPHISICWEQS--DTWALDNVLQELGRERTIAMSLPEFEQSL 242 H L P I Q + +L G IA + + L Sbjct: 172 TRHALCAFAQLELKQLDGQPFIMPSPAQGKYFHDRIMGILAAEGVNLNIAQYIDQTPTIL 231 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 + L LA P Q ++ + + F L ++ W + P Sbjct: 232 SLVRA--GLGLAILPASAQRFHYDN--------VEFRLIAGNTLHAEMSMAWRADQDN-P 280 Query: 303 KIVWLR 308 + R Sbjct: 281 AVTAFR 286 >UniRef50_C5S6X6 Transcriptional regulator, LysR family n=1 Tax=Allochromatium vinosum DSM 180 RepID=C5S6X6_CHRVI Length = 322 Score = 214 bits (547), Expect = 3e-54, Method: Composition-based stats. Identities = 45/321 (14%), Positives = 93/321 (28%), Gaps = 25/321 (7%) Query: 1 MKKSIT---TLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVN 57 M+ ++L L + + + R +AA+R V+ +S + KL D +F Sbjct: 1 MRLDFRYHAHVNLRDLKYILAVAETRHFGRAAERCFVSQPTLSGQIKKLEDELDVIIFER 60 Query: 58 SPLGLSPTPLMVSMEQNLAEWMQMSNLLLDKPHH-QTPRGLKFELAAESPLMMIMLNALS 116 + + TP+ ++ + ++ + + Q P + A L ++ + Sbjct: 61 TNRSVEITPVGAAILAHARLALEQAEAIEQVARAHQDPMAGPLRIGAIPTLSPYLMPLIL 120 Query: 117 KQIYQRYPQATIKL-RNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVL 175 + Q YP+ + L L + R E+D D L Sbjct: 121 MPLKQTYPKLRLVLSEEITDLLLGRLARHEIDAALLATAVDE----------NDFDSLPL 170 Query: 176 FSDVPCVWLRKDHPA-LHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERT---I 231 F + + +HP H D + + + T + V R Sbjct: 171 FEEPFWLAHPVNHPLQTHPEITADDLEQIELLLLADGHCLTHQVMAVCHLSERSHRGEMA 230 Query: 232 AMSLPEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFT 291 + E + + P + LV L + Sbjct: 231 DLRASSLETLVQLVRA--GFGCTLIPALAVRTGETSDTGLVTRSLA----ALPDAYRRIS 284 Query: 292 LLWHKRNSHNPKIVWLRETIK 312 L++ K + E ++ Sbjct: 285 LVFRKSFPRRQALEAFAEVVR 305 >UniRef50_C4UEX0 Lys-R type regulatory protein n=1 Tax=Yersinia ruckeri ATCC 29473 RepID=C4UEX0_YERRU Length = 299 Score = 214 bits (547), Expect = 3e-54, Method: Composition-based stats. Identities = 73/316 (23%), Positives = 129/316 (40%), Gaps = 21/316 (6%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 S+ +DLNLL+ L +L+ ER V++AAKR+ ++ AVS +L +LR DD L V G Sbjct: 2 NSLRAIDLNLLVILDVLLSERHVSRAAKRLYMSQPAVSHALNRLRYLLDDELLVRVAGGF 61 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKP-HHQTPRGLKFELAAESPLMMIMLNALSKQIYQ 121 T ++ + L E ++ ++ +F +A ++L L +++ Q Sbjct: 62 QLTRRAAALIEPLKEVLEKVRYIIGTGNFEPALATQRFRIALSDYGAAMVLPGLLQRLRQ 121 Query: 122 RYPQATIKLRNWDYDS-LDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 + P + + + ++ + G++D+ LP + LF + Sbjct: 122 QAPGIDLVVEQASREQMIEQVMAGQLDLALGVFP----------DLPADMTASRLFEEHF 171 Query: 181 CVWLRKDHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFE 239 + + +P + + LD +L PH+ + ++ L ELG R +A +P F Sbjct: 172 VCVIDQANPLARKKYFTLDDYLVQPHLLVSMRGESVGEVETALAELGVRRRVAAIMPHFL 231 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 + A D LLL A R + L + LP F +WH RN Sbjct: 232 LAPQALAGTD-LLLTVASRVVTIQQESMNLQRLTLPFTVPN-------FDFVQIWHNRNH 283 Query: 300 HNPKIVWLRETIKNLY 315 WLR+ + Sbjct: 284 GKEDHRWLRQQVAESC 299 >UniRef50_UPI0001B565BC LysR family transcriptional regulator n=1 Tax=Streptomyces sp. AA4 RepID=UPI0001B565BC Length = 298 Score = 214 bits (546), Expect = 4e-54, Method: Composition-based stats. Identities = 39/311 (12%), Positives = 90/311 (28%), Gaps = 28/311 (9%) Query: 9 DLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLM 68 +L L + + S T+AA +++ ++S+ + L LF P G T + Sbjct: 4 ELRQLRYFVAVAETTSFTRAAAALHIAQQSLSQQITVLERQLGAQLFTRDPRGARLTAIG 63 Query: 69 VSMEQNLAEWMQMSNLLLDKP-HHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQAT 127 + ++ + LA + +L + + + + P+ T Sbjct: 64 ELFLPEARVVLARADTAVATVARAVRGEIGTLRLAFLASTANYLLPPVMRAVREHLPELT 123 Query: 128 IKLRNWD-YDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRK 186 + + ++ + G D GF+ L + L ++ C L Sbjct: 124 VTTAEVSIAELVEGVRDGRFDAGFTRPP-----------LVDDLATHTLLTEEVCAVLPT 172 Query: 187 DHPALHQT-WNLDTFLRYPHISICWEQ--SDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 H + L P + D G + + L Sbjct: 173 GHRLADRPALRLSDLADEPWVLTPRASWDPWHRKYDADFAAAGFTPEVVQRTATVQGLLG 232 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 + A + R + + L + +V +PL + + ++W Sbjct: 233 LVAAGVGVT-----RLARSAHSLRRTGVVFVPLEGESA-------HTVVVWRSAGPRPAA 280 Query: 304 IVWLRETIKNL 314 ++ + + Sbjct: 281 LLDVVTRLAET 291 >UniRef50_Q0RL92 Putative uncharacterized protein n=1 Tax=Frankia alni ACN14a RepID=Q0RL92_FRAAA Length = 313 Score = 214 bits (546), Expect = 4e-54, Method: Composition-based stats. Identities = 45/312 (14%), Positives = 97/312 (31%), Gaps = 22/312 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L+ L + ++ + ++AA+R+ + A+S+S+ +L LFV S + TP Sbjct: 8 VELHHLRHFVAVAEDLNFSRAARRLCIAQPALSQSIKRLEVSLGLELFVRSRTNVELTPA 67 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQT-PRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + L +P + +L A+ + + P Sbjct: 68 GHAFLVETKATLLQVERAELTARRVASGEQGSLRLGYVTPAVFEILPAIIRSFSRESPDV 127 Query: 127 TIKLRNWD-YDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + D +D + G++D+G LP + ++ + Sbjct: 128 EVIFEELPVEDQIDKLRGGDIDLGIIMGR---------RELPPEVHLHLIGHVDVAAAVP 178 Query: 186 KDHPALHQT-WNLDTFLRYPHISIC--WEQSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 P + L P I + + LG T+A +L Sbjct: 179 STWPLARREQIRLKDLRHQPLIMVPRERHPDIYDDFMAACRRLGFSPTVAHRTSNPMTTL 238 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 + A + + + V + +P +S + W R + P Sbjct: 239 SLVAGGMGIG------LVAGASTSFWVRDVTI-VPIVDSPGDPIARSMFAAWIPRAQN-P 290 Query: 303 KIVWLRETIKNL 314 + L ++ L Sbjct: 291 ALERLLSSVMAL 302 >UniRef50_C4K9T0 Transcriptional regulator, LysR family n=1 Tax=Thauera sp. MZ1T RepID=C4K9T0_THASP Length = 309 Score = 214 bits (546), Expect = 4e-54, Method: Composition-based stats. Identities = 42/273 (15%), Positives = 88/273 (32%), Gaps = 14/273 (5%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L + +E + T+AA R+++ +S + L LF P ++ + Sbjct: 2 MELRHLRYFIAVAEELNFTRAATRLHIGQPPLSMQIRDLEEEIGVRLFERGPRRVALSTA 61 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPL-MMIMLNALSKQIYQRYPQ 125 + + + + + + S L +L +R+PQ Sbjct: 62 GERFLLHARRILDGVEEAVAEARRAARGELGELRVGFTSSLPFTDLLPDALNAYRRRFPQ 121 Query: 126 ATIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 ++LR + A+ GE+D+GF ++ P I + + + + Sbjct: 122 VRLQLREMFTPEQFQALVSGELDVGFVRLQAGTP--------PAGIVLREVARNPLRLVV 173 Query: 185 RKDHPALHQT-WNLDTFLRYPHISICW--EQSDTWALDNVLQELGRERTIAMSLPEFEQS 241 H +L IS L + ++ G E I + E Sbjct: 174 NAAHRLAGAAQVHLAELAGEDFISFPADVGTDLPGVLRALCRQAGFEPRIVQTAREATTQ 233 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVAL 274 + + A + + AP ++ L L Sbjct: 234 IGLVAAGLGVAVLPAPLESVRIARVRYLALAEP 266 >UniRef50_A4Y0W1 Transcriptional regulator, LysR family n=13 Tax=Gammaproteobacteria RepID=A4Y0W1_PSEMY Length = 320 Score = 214 bits (546), Expect = 4e-54, Method: Composition-based stats. Identities = 48/316 (15%), Positives = 100/316 (31%), Gaps = 22/316 (6%) Query: 1 MKKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPL 60 M+K++ + L L + + + S ++AA + +T AVS + +L PLF Sbjct: 1 MRKTLLRMTLRQLQVFRAVCEHGSYSRAADEMALTQPAVSLQIRQLEELVGQPLFEYVGK 60 Query: 61 GLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTP-RGLKFELAAESPLMMIMLNALSKQI 119 L T ++ + ++ L + + L + L + Sbjct: 61 KLYLTEAAEALRRASSDIFGRLESLDMQLSDLQGSLQGQLNL-CVESSAKYFVPHLFAEF 119 Query: 120 YQRYPQATIKLRNWDYDS-LDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSD 178 + YP+ ++ L ++ + +T D+ + + +D+ ++ Sbjct: 120 RRHYPEVSLNLTVVNHALVVRRLTLSRDDLMIMSQVPQDMA----------LDFMPFLNN 169 Query: 179 VPCVWLRKDHPA-LHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPE 237 DHP QT L + + A + + + + Sbjct: 170 PIVAVAAPDHPLCSQQTLQLQDLTAHALLIRESGSGTRRACEEYCNQKRAHFAQTLEIGS 229 Query: 238 FEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKR 297 + A L LA PR+ H L L LP+ Q+ V + Sbjct: 230 LDAQRE--AAIAGLGLALLPRHAVRLELEHGL-LRELPVAELPLQRSWCVVNI-----RG 281 Query: 298 NSHNPKIVWLRETIKN 313 +P + I++ Sbjct: 282 RRLSPVAQAFVDFIRS 297 >UniRef50_A6WFB8 Transcriptional regulator, LysR family n=1 Tax=Kineococcus radiotolerans SRS30216 RepID=A6WFB8_KINRD Length = 307 Score = 214 bits (546), Expect = 4e-54, Method: Composition-based stats. Identities = 44/321 (13%), Positives = 91/321 (28%), Gaps = 29/321 (9%) Query: 7 TLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTP 66 ++L L +++ +++ AA+R+ S VS + L LFV + PT Sbjct: 4 RVELRQLEVFLAVVEAGTISAAARRLGTAQSVVSTVVRALEEDLGAGLFVRTSRRAVPTD 63 Query: 67 LMVSMEQNLAEWMQMSNLLLDKPHHQ-TPRGLKFELAAESPLMMIMLNALSKQIYQRYPQ 125 ++ + + + + + + L L ++ +P+ Sbjct: 64 AGRALVPEARRLLAGVSQARAAVRGAEEGPTGPVAVGVVTTMHPVDLPRLLQRFTAEHPR 123 Query: 126 ATIKLR---NWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCV 182 ++ +R + L A+ GE+D F P L L + Sbjct: 124 VSVSMRVFADGSRGLLRALVEGELDAAFLSWPFRPPGAVAL---------RPLVRAPLRL 174 Query: 183 WLRKDHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQS 241 L HP L I + +D V + G R + + +P+ Sbjct: 175 LLPAGHPLASPGPVELADLAGERWIDGPPGFGNRLQVDAVFERAGARRHVVLEVPDVSTF 234 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHK---RN 298 A L A P V ++ +L + Sbjct: 235 PRYVAA--GLGPAFVP----------GSVPVPPGCHEQAVTGEQPGWTLSLATARPSPER 282 Query: 299 SHNPKIVWLRETIKNLYASMA 319 + E ++ ++ Sbjct: 283 PARRAVTAFVEAVERDVRRVS 303 >UniRef50_D1TCI7 LysR family transcriptional regulator n=2 Tax=Burkholderia RepID=D1TCI7_9BURK Length = 329 Score = 214 bits (546), Expect = 4e-54, Method: Composition-based stats. Identities = 63/319 (19%), Positives = 123/319 (38%), Gaps = 22/319 (6%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 DLNLL+ + L++ERSVT+AA+R+ + AVS +L +LR F D LFV +P G+ Sbjct: 20 NDFRRFDLNLLVTFRALLEERSVTRAAQRLLLGQPAVSGALKRLRETFGDELFVRTPQGM 79 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDK--PHHQTPRGLKFELAAESPLMMIMLNALSKQIY 120 +PTP + + + + ++Q + L + F + L ++++ + ++ Sbjct: 80 TPTPRALELARQIEPFLQSLHQALTQPSVFDPASAQRVFRIGLSDSLELLLMPEIMARLA 139 Query: 121 QRYPQATIKLR-NWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 P + R + + G +++ + L+ LFS Sbjct: 140 AAAPGVKLIARSTDSTRAAAMLDDGAIELAVGVFRECVPWQRLM----------PLFSWR 189 Query: 180 PCVWLRKDHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEF 238 + ++D FLR+ H+ + +D L+ G R + S F Sbjct: 190 FVSVYNPQLVRTRRKHLSMDEFLRHRHVLTSFSAELRGFIDERLELQGLNREVVFSSSNF 249 Query: 239 EQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRN 298 S F+ + + + + L L LP +L+W + Sbjct: 250 ATSPFIVQRTAAIA-TVPEFIGRVWRDTLGLALSPLPFEVP-------GYEVSLMWAAAH 301 Query: 299 SHNPKIVWLRETIKNLYAS 317 +P + WL+ + + + Sbjct: 302 DQDPALAWLKREFADAFGT 320 >UniRef50_A6W0Q8 Transcriptional regulator, LysR family n=2 Tax=Marinomonas RepID=A6W0Q8_MARMS Length = 295 Score = 214 bits (546), Expect = 4e-54, Method: Composition-based stats. Identities = 41/307 (13%), Positives = 85/307 (27%), Gaps = 24/307 (7%) Query: 7 TLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTP 66 + L L + ++ SVT AA+ ++++ A S++L +L A PLF L TP Sbjct: 2 RITLRQLQIFEAVVHTGSVTAAAEMVSISQPAASQALRELEALLGRPLFRRHGKRLQITP 61 Query: 67 LMVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + + ++ LAA + +L +++P Sbjct: 62 QARHLLPQARAVLSQIEQIES-MGNEDELSGSLHLAASVSVGNYLLPKQMSLFKRQHPNI 120 Query: 127 TIKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 L + + + G+ ++GF + +V D V+ Sbjct: 121 RFNLDIGNTQSVIQQLLTGKAEVGFIEGYCQ----------HAELMTQVWLKDELVVFGS 170 Query: 186 KDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMA 245 + + + + + L+ + + +SL E Sbjct: 171 AEEER-PKNLSWEDLKEASWVMRESGSGTRNILEQATAAQIPQLNVVLSLAHMEAVKQAV 229 Query: 246 AQPDNLLLATAPRYCQYYNQLHQL-PLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 L R L L PL ++ K + Sbjct: 230 IHQMGLGC--LSRMAISQELNAGLIRLYQTPLEL--------NRNLLIVTPKNTALTQNA 279 Query: 305 VWLRETI 311 + Sbjct: 280 QRFIDLC 286 >UniRef50_B8HGN1 Transcriptional regulator, LysR family n=4 Tax=Micrococcineae RepID=B8HGN1_ARTCA Length = 312 Score = 213 bits (545), Expect = 4e-54, Method: Composition-based stats. Identities = 47/315 (14%), Positives = 96/315 (30%), Gaps = 19/315 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 D+ L L ++++ S+T AA + +PSAVS+ L KL PL G+ PT Sbjct: 10 FDMRRLAVLLEVVEQGSITAAADLMMYSPSAVSQQLRKLEQEVGQPLLTRRSRGVVPTEA 69 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + + ++ + L L + + +RYP Sbjct: 70 GQVLAGHARQILRQMKAAQSDLDQIAGLKRGALTVGTFPTLAGSFLPIVIRAFKKRYPAI 129 Query: 127 TIKLRNWD-YDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 ++ LR+ + + + G +I +F + + + Sbjct: 130 SLSLRSARFDELVADLQSG------VTGLCLLWDYPWNRFQNDSIRVTEVFRESTVILVA 183 Query: 186 KDHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 HP ++ I L + G E TI +++++ M Sbjct: 184 ASHPLAEQDQVGMEDLRNESWIVRAEAHPVVEVLQRSAHDAGFEPTIGFLANDYQEAQAM 243 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 + +A P+ + L + + L + + P Sbjct: 244 V--SVGMGVAMVPKTA--------VALQHPDVRVLSLGDEAPLRRVLLAQRQDKVYAPAE 293 Query: 305 VWLRETIKNLYASMA 319 V + T+ + A Sbjct: 294 VAFQTTLLEIARERA 308 >UniRef50_A9C1Z6 Transcriptional regulator, LysR family n=1 Tax=Delftia acidovorans SPH-1 RepID=A9C1Z6_DELAS Length = 295 Score = 213 bits (545), Expect = 4e-54, Method: Composition-based stats. Identities = 34/272 (12%), Positives = 81/272 (29%), Gaps = 17/272 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +DL L L + + +AA++++++ +S+S+ +L LF G + T Sbjct: 1 MDLRQLRHFVTLARTLNYRQAAEQLHMSQPPLSQSIRRLEDSLGVQLFQRDRRGTALTEA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHH-QTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 ++ ++ + + + + + + ++ L + YP Sbjct: 61 GLAALESAELALHHARQMQEVSRATAGGERGRLHIGFIGSATFSLIPRLVQAFRSEYPLI 120 Query: 127 TIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + L + + G+ D G + + + D L Sbjct: 121 DLVLTESTTREICAQVASGDFDAGLLRYPVTQAT---------DLSITPVEKDELVAVLP 171 Query: 186 KDHPALHQT-WNLDTFLRYPHISICWE--QSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 + +P L + L P I+ + Q G + + + + Sbjct: 172 EGNPLLQRPALRLRDLADQPFINYRPSEVPGLHALVVLACQNAGFMPQVKQHAVQAQTLV 231 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVAL 274 + L +A P + AL Sbjct: 232 SLV--GAGLGVALVPAVVAK-GSTPGVVFRAL 260 >UniRef50_C4DH98 Transcriptional regulator, COG0583 n=1 Tax=Stackebrandtia nassauensis DSM 44728 RepID=C4DH98_9ACTO Length = 310 Score = 213 bits (545), Expect = 4e-54, Method: Composition-based stats. Identities = 41/314 (13%), Positives = 85/314 (27%), Gaps = 20/314 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++ L + + + S T AAK + T SA+S+ +A L + D LF G+ T Sbjct: 1 METAWLEVFRAIARTGSFTAAAKDLGYTQSAISRHVAALESEMDAVLFHRLARGVRLTEP 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + + N + + + + + + ++ + +P Sbjct: 61 GRFLLGHAEAVLARLNEAKKDIGDVRRLAAGRVRVGSFATVGVTLVPQAIARFTAAHPDV 120 Query: 127 TI-KLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 T+ L + + R E+D+ + + L + V L Sbjct: 121 TVTHLDDLTRQLAPRVARDELDVAVLNGYPPQIAAL------PPLSLRKLCDEPMSVALP 174 Query: 186 KDHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 H + L I+ L + G IA E+ Sbjct: 175 AGHRLADRRRVRLTELADENWIAGNPTPE--DTLISAALRQGFAPRIAYVAREWTAKQGF 232 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 A L + P + + LV + P + Sbjct: 233 VAA--GLGVTLIPALAAA-SIRPDIALVPVD------SATTPVRGIYAATAPEIEPAPAV 283 Query: 305 VWLRETIKNLYASM 318 + + + Sbjct: 284 RAFVDVLCAQAERL 297 >UniRef50_D0LKM3 Transcriptional regulator, LysR family n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LKM3_HALO1 Length = 307 Score = 213 bits (545), Expect = 5e-54, Method: Composition-based stats. Identities = 77/314 (24%), Positives = 127/314 (40%), Gaps = 22/314 (7%) Query: 4 SITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLS 63 ++ ++LNLL+ L L+ ERSV++AA+R V+ A+S+SL +LRA FDD L L Sbjct: 5 RLSEINLNLLVSLDALLTERSVSRAARRTGVSQPAMSQSLRQLRAIFDDALLARDRGVLV 64 Query: 64 PTPLMVSMEQNLAEWMQMSNLLL--DKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQ 121 TP + L + +L +KP +F +A + +L L ++ + Sbjct: 65 LTPAAERLMVPLRHALVAVQRVLDGEKPFDPGRAERRFTIAVGDFAAVTLLPPLLERASR 124 Query: 122 RYPQATIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 P +R + + GE D+ + ++L+ D Sbjct: 125 EAPGIGFDVRPAEPTRLFERLATGEFDLVIGAKLDASG----------DFMRQLLYRDGF 174 Query: 181 CVWLRKDHP-ALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFE 239 R+DHP +L+ + PH+ I +D +L E G++R IA+ +P F Sbjct: 175 VCMARRDHPELSGDALDLERYAALPHVLISPTGEGPSVVDRLLAERGKQRRIALRIPYFL 234 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 + M + D +L A + H L L PL LWH+R Sbjct: 235 AAPLMVVRSDLVLTA-PRSVAGAFASTHALALFEPPLELPSFG-------VYQLWHQRYQ 286 Query: 300 HNPKIVWLRETIKN 313 + WLRE + Sbjct: 287 SDDAHRWLRELVAA 300 >UniRef50_B8J696 Transcriptional regulator, LysR family n=3 Tax=Anaeromyxobacter RepID=B8J696_ANAD2 Length = 296 Score = 213 bits (545), Expect = 5e-54, Method: Composition-based stats. Identities = 35/287 (12%), Positives = 91/287 (31%), Gaps = 18/287 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L + +E +AA R+ + +S+ + +L LF+ + + T Sbjct: 1 MELRHLRYFVAVAEELHFGRAAARLGIAQPPLSQQIRQLERELGVELFLRARRRVELTEP 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKP-HHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + +Q ++ + + + ++ + + R+P Sbjct: 61 GRVLLGHARAVLQRASQAAEDVRRAARGETGALSVGVVASATYGVVPRVFRTFRARHPDV 120 Query: 127 TIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + + + A+ G++D+G + + + E + + V L Sbjct: 121 ALGVAVMSTGAQVAALRAGQLDLGLARTPFGDET----------LVAETVLEEPVVVALP 170 Query: 186 KDHPALHQTWNLDTFLR-YPHISIC--WEQSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 HP + L P + + + +E G +A PE ++ Sbjct: 171 AGHPLSARRALRLAALAPEPFVLFPRDRRPGWYDFVLGLCREAGFRPRVAEDAPELATAM 230 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVP 289 + A + + P + + + + P ++ L P Sbjct: 231 ALVAA--GIGVTLVPASVKDL-RRSGVDYRPIAAPRARTRLVALRRP 274 >UniRef50_A6UBA0 Transcriptional regulator, LysR family n=7 Tax=cellular organisms RepID=A6UBA0_SINMW Length = 306 Score = 213 bits (545), Expect = 5e-54, Method: Composition-based stats. Identities = 51/313 (16%), Positives = 102/313 (32%), Gaps = 19/313 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +DL+ L L+ L +++ A+ + V+PSAVS+ +A L L G+ TP Sbjct: 1 MDLSRLRALRELSIRKTMAAVAEALYVSPSAVSQQIALLEQEVGIDLIERRGRGVELTPA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + + + +AA + ++ +++ +P+ Sbjct: 61 GKQLVERAERILIELESARADIAELKKVIAGELRVAAFPSVAGAVVAGAIHGLHRLHPRL 120 Query: 127 TIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 T++ +SL A+ + DI +L I+ L DV V + Sbjct: 121 TVQFDEMEPAESLAALRSWQTDIAII-----DDLNVPSGALDPNIETIPLMEDVFNVMVS 175 Query: 186 KDHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 + HP T L + + + QE G I FE ++ + Sbjct: 176 RTHPLAEQSTVMLHQLRNERWALDTASSTYNRMITDACQEAGFTPNIVARCKGFEVTIAL 235 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 Q ++ P Y L + + ++ +L + K +P + Sbjct: 236 IRQ--GYGISILPGLRASY---------DLEDVWVCKLEPEIRRKISLAFRKGEKRSPAV 284 Query: 305 VWLRETIKNLYAS 317 + S Sbjct: 285 QAFIAEVNERVGS 297 >UniRef50_A0KH33 Transcriptional regulator, LysR family n=2 Tax=Aeromonas RepID=A0KH33_AERHH Length = 313 Score = 213 bits (545), Expect = 5e-54, Method: Composition-based stats. Identities = 69/318 (21%), Positives = 131/318 (41%), Gaps = 23/318 (7%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 + +LNLL L++L++ R++++AA+ ++++ ++SK L +LR+ F D L V Sbjct: 1 MHKANLNLLPTLKVLLETRNISRAAELLHLSQPSISKQLGQLRSEFGDELLVREGQRWLL 60 Query: 65 TPLMVSMEQNLAEWMQMSNLLLDKP-HHQTPRGLKFELAAESPLMMIMLNALSKQIYQRY 123 TP ++ LA+ + L + P + F LA+ + +L + + + Sbjct: 61 TPRAEALAAQLADSLGALERLYEAPGFDPSRCERVFRLASSDYVAQHILPDICAALAREA 120 Query: 124 PQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVW 183 P A ++ WD L + + E+D+ + +P I D V Sbjct: 121 PLAALEYSLWDKRLLPQLWQSELDMV----------STITELVPDQIRGLHQGEDRLVVL 170 Query: 184 LRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 + HP ++ +LD +L +PH+ + ++ VL G R +P F+ ++ Sbjct: 171 MGSHHPLAGRSLSLDDYLAWPHLQVSGGGDKDSPVEQVLAPQGLSRRWFARVPFFQAAVE 230 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 + + D L L T + H L LP + LLWH+R+ +P Sbjct: 231 VLLRTDCL-LTTPAHIAWQLSCEHALHFCDLPFASRTQ-------QYHLLWHQRHHQDPA 282 Query: 304 IVWLRET----IKNLYAS 317 W RE ++ Sbjct: 283 HKWFRELAYPFLREHLQR 300 >UniRef50_Q8XRG7 Probable transcriptional regulator transcription regulator protein n=1 Tax=Ralstonia solanacearum RepID=Q8XRG7_RALSO Length = 308 Score = 213 bits (545), Expect = 5e-54, Method: Composition-based stats. Identities = 65/326 (19%), Positives = 122/326 (37%), Gaps = 27/326 (8%) Query: 1 MKKSIT------TLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPL 54 M+ LDLNLL + + + R++T +R+ ++ AVS+ LA+LR + D L Sbjct: 1 MRMRDDSGKSAPHLDLNLLELFESIWRTRNLTATGERLGLSQPAVSRGLARLRETYGDEL 60 Query: 55 FVNSPLGLSPTPLMVSMEQNLAEWMQMSNLLLD-KPHHQTPRGLKFELAAESPLMMIMLN 113 FV G+ PT ++ + ++ + + ++ +F +A L Sbjct: 61 FVRHRRGVEPTAFAQTLAEPVSAALAIVRRTIEKPTFSAAEDARRFRVALSDIGERYFLP 120 Query: 114 ALSKQIYQRYPQATIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDY 172 L+ + PQ +I + + L + GE+D+ L + Sbjct: 121 RLAAWLADHAPQVSIDTVSASREELLTGLASGEIDLAVGFLP----------GLGKQVHE 170 Query: 173 EVLFSDVPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDT-WALDNVLQELGRERTI 231 + LF + R+DHP + PH+ + A++ VL + Sbjct: 171 KRLFQEKFVYIARRDHPGIDGRLQASQLRALPHVVGSPHGTQHAAAVEKVLTGPRVRAVV 230 Query: 232 AMSLPEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFT 291 AM + F + A D + + ++ L L+A P+ F + Sbjct: 231 AMRVGSFLSIGPIVADSDLVAV-VPSNLAALVSEHVGLQLIAPPVRFP-------SFEVS 282 Query: 292 LLWHKRNSHNPKIVWLRETIKNLYAS 317 ++WH+R +P WLR L+ Sbjct: 283 MVWHRRFHGDPGGAWLRGVFSQLFGE 308 >UniRef50_B5ZQW7 Transcriptional regulator, LysR family n=18 Tax=Proteobacteria RepID=B5ZQW7_RHILW Length = 302 Score = 213 bits (545), Expect = 5e-54, Method: Composition-based stats. Identities = 49/310 (15%), Positives = 103/310 (33%), Gaps = 19/310 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 L + + ++ SVT+AA+ ++++ S+V+++L +L LF P GL+ T Sbjct: 3 FTLRQVQYFVAVAEQGSVTRAAQNLSISQSSVTEALKELETDLGVALFERHPRGLAITHN 62 Query: 68 MVSMEQNLAEWMQMSNLLLDK-PHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 ++ + + + Q+ + S + +L+ L + + P Sbjct: 63 GHQFLRHATKILASVSDARTSFAGQQSALSGTLNIGVTSLVAGYVLSDLLARYRRACPGI 122 Query: 127 TIKLRNWDYDSLDAIT-RGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + + L+ + GE+D+ +A+ E+L + +WL Sbjct: 123 EVSAIEDNGGYLEHLLVGGELDVAVM--------VISNLRDRMALQAEILETSPYRLWLP 174 Query: 186 KDHPA-LHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 HP ++ R P I + + +L LG +A E + Sbjct: 175 MGHPLVSADIISVADIAREPLIMLTVD-EIEENTGKLLSALGARPHVAFRTRSVEAVRSL 233 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 A +A P L + + V ++W K +S Sbjct: 234 VAT--GAGVALLPDLVYRPWSLEGDRI-----ESRDVSGSLPVVQVGMVWRKGSSLPQAA 286 Query: 305 VWLRETIKNL 314 ++L Sbjct: 287 RDFVGIAESL 296 >UniRef50_A4XX96 Transcriptional regulator, LysR family n=3 Tax=Proteobacteria RepID=A4XX96_PSEMY Length = 312 Score = 213 bits (545), Expect = 5e-54, Method: Composition-based stats. Identities = 83/321 (25%), Positives = 142/321 (44%), Gaps = 24/321 (7%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 LDLNLL+ L+ L+ E++VT+AA R++++ AVS L++LR F+DPL + + G+ Sbjct: 1 MDTRRLDLNLLVTLEALLIEQNVTRAAARLHLSQPAVSAQLSRLRDVFNDPLLIPAQRGM 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKP--HHQTPRGLKFELAAESPLMMIMLNALSKQIY 120 +PT + + L + + + L +A + ++ L + Sbjct: 61 TPTVKALELLVPLRQALDQVRATVTTHLNFEPATASLTVSIACTDYVQAALIKHLVVAMR 120 Query: 121 QRYPQATIKLRNWDYDSLD-AITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 + P I LR D L+ +TRGEVD+ ++ P A+ + L+ + Sbjct: 121 REAPGVRIALRILDVPQLELQMTRGEVDLAVI----------NMNGAPPALHAQHLYDES 170 Query: 180 PCVWLRKDHPALHQTWNLDTFLRYPHISIC-WEQSDTWALDNVLQELGRERTIAMSLPEF 238 + R+ HP+LH +D F + H+ + + ++DN L G R + +S F Sbjct: 171 YVLIGRRGHPSLHAGLTVDEFAQLEHVVVSLRGGGFSTSVDNALVARGLRRNVVLSASSF 230 Query: 239 EQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRN 298 + AQ D +A PR + QL VA PLP + + WH+R+ Sbjct: 231 LPVPELVAQSDC--VALVPRRLVE-GRDEQLLCVAPPLPVE-------GFAIGMFWHERS 280 Query: 299 SHNPKIVWLRETIKNLYASMA 319 + W+RE I + S A Sbjct: 281 DGHAGFRWVREFITLVADSRA 301 >UniRef50_Q12EW2 Transcriptional regulator, LysR family n=1 Tax=Polaromonas sp. JS666 RepID=Q12EW2_POLSJ Length = 309 Score = 213 bits (545), Expect = 5e-54, Method: Composition-based stats. Identities = 43/310 (13%), Positives = 92/310 (29%), Gaps = 22/310 (7%) Query: 7 TLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTP 66 + L + L+ + S T+AA+ +++T SA+S + + + LF + ++ T Sbjct: 2 NVTLRQIQAFVLVARLGSFTRAAQAMHLTQSALSLLVREFEGAIESRLFDRTTRAVTLTV 61 Query: 67 LMVSMEQNLAEWMQMSNLLLDKPHHQ-TPRGLKFELAAESPLMMIMLNALSKQIYQRYPQ 125 + + + + + +AA L L L + +YP Sbjct: 62 VGSDLFPRAERILADLESAISGVDKLMARERGRVVVAAPLLLSSTYLPPLLAAFFAKYPG 121 Query: 126 ATIKLRN-WDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 + L++ L + G D+G S + +LFS+ Sbjct: 122 IEVVLQDTLPSQVLPLVRGGAADVGIGTFASDEV----------DVRRTLLFSEAMVAAF 171 Query: 185 RKDHPALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 H Q + P +++ + G A + Sbjct: 172 PVGHAFSRLQKLTWADVAQEPVLALSRGSVFRDLTEAGFAAAGLILKPAREANYAGSLIG 231 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 M L +A P Y ++ + + ++ +L+ S +P Sbjct: 232 MVDA--GLGVAILPGYAVKLTDPARIGWHRV-------ENPLIDREVSLVQRAGVSLSPA 282 Query: 304 IVWLRETIKN 313 + I Sbjct: 283 AQGFVDFIVA 292 >UniRef50_A6TWD6 Transcriptional regulator, LysR family n=1 Tax=Alkaliphilus metalliredigens QYMF RepID=A6TWD6_ALKMQ Length = 305 Score = 213 bits (545), Expect = 5e-54, Method: Composition-based stats. Identities = 51/309 (16%), Positives = 113/309 (36%), Gaps = 24/309 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +D+ L + + + T+AAK + V SAVS+ +A L + LF + + T Sbjct: 1 MDIRQLRYFIAVAEHLNFTEAAKHLFVAQSAVSQQIADLENKIEVKLFDRNKRSVKLTHA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQT-PRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + + + + + K ++ L L + + Y Sbjct: 61 GGVLLKEAIDIVSRAEEAVIKTQEAELGIIGSLKIGFLGYTEKNFLPFLIRGFRRNYQNI 120 Query: 127 TIKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 ++L +++ +D+++ GE+DIGF+ ++ LF++ + + Sbjct: 121 DLQLDQYNHGILIDSLSTGELDIGFT--------LSFGLDNIGGLEKRSLFTEPISIVMH 172 Query: 186 KDHPALHQ-TWNLDTFLRYPHISICWEQSDTW--ALDNVLQELGRERTIAMSLPEFEQSL 242 DHP HQ + NL + I++ +S + G I L Sbjct: 173 CDHPLAHQSSINLGDLAQERFIALNRHESPQGFNQTLLICANKGFSPNIVSGPKLLHTVL 232 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 + + +A P+ +++ L F + + + ++ + W K ++ NP Sbjct: 233 LLVDAE--MGIAILPKSLEHHAS--------PSLRFIDIEGEAVQHELVVAW-KTSNQNP 281 Query: 303 KIVWLRETI 311 I + + Sbjct: 282 SIPLFLKEL 290 >UniRef50_C5CQD2 Transcriptional regulator, LysR family n=1 Tax=Variovorax paradoxus S110 RepID=C5CQD2_VARPS Length = 302 Score = 213 bits (545), Expect = 5e-54, Method: Composition-based stats. Identities = 43/315 (13%), Positives = 94/315 (29%), Gaps = 23/315 (7%) Query: 7 TLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTP 66 L L L + + S T AA+++++T SA+S + +L L + + Sbjct: 2 NLTLRQLRAFAAVAETGSFTAAAQQLHLTQSALSVLVRELEREMGVQLLDRHTRRVQLSE 61 Query: 67 LMVSMEQNLAEWMQMSNLLLDKPHHQ-TPRGLKFELAAESPLMMIMLNALSKQIYQRYPQ 125 ++ + + + LAA + ++ + + +P Sbjct: 62 AGREFLPSVHRLLGDLAGAVAGVTDLRDKKKGLLRLAAPQLMACTLMPRVIALYREAFPD 121 Query: 126 ATIKLRN-WDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 ++L + L +T G+V++ ++ A++ LF D + Sbjct: 122 VDVRLADTLPEHLLAGVTAGDVELAVG----------QDVAVDGAVERRTLFRDRHWLIC 171 Query: 185 RKDHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTI-AMSLPEFEQSL 242 H + Y I+ + + E + +L Sbjct: 172 PPGHAFAKRRKVRWHELGPYTFIAPTRDFRQRVLPELAPAERELMLRPGTQEVSYMTTAL 231 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 M A L + P Y + H L +V L + + R + +P Sbjct: 232 GMVASGLGLTVC--PTYSAPLVRAHGLQMVRL-------ESPDFHREVCIYSAARRTLSP 282 Query: 303 KIVWLRETIKNLYAS 317 E ++ + Sbjct: 283 AAASFVEILERHART 297 >UniRef50_Q1GQE8 Transcriptional regulator, LysR family n=1 Tax=Sphingopyxis alaskensis RepID=Q1GQE8_SPHAL Length = 301 Score = 213 bits (545), Expect = 5e-54, Method: Composition-based stats. Identities = 49/315 (15%), Positives = 95/315 (30%), Gaps = 24/315 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLG-LSPTP 66 ++L L + +M SVT+AA+ +N++ AVSK LA+L LF+ S L+ TP Sbjct: 1 MNLRHLEAFRAVMLSGSVTQAAQSLNLSQPAVSKMLAELEHQLGFQLFLRSRGSALTVTP 60 Query: 67 LMVSMEQNLAEWMQMSNLLLDKPHHQTP-RGLKFELAAESPLMMIMLNALSKQIYQRYPQ 125 + + L +AA L + L + + +P Sbjct: 61 EADAFFYEVERSFSGIAALKRVAEDIRNMATGTLRIAALPALAVSFLPRVIAAFRETHPG 120 Query: 126 ATIKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 T++L+ ++ + + DIG + I E L Sbjct: 121 VTVQLQTRSSSTVRQWMANQQFDIGLATPARELP----------GIRMERFLRCPGACVL 170 Query: 185 RKDHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 H P IS+ E +D + ++ G R + + Sbjct: 171 PAGHRLAVKDVIRPADLEGEPFISLALEDGVRHRIDRIFEDAGVHREMVIETQYAMTICA 230 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 + Q + + L + ++ + L K + Sbjct: 231 LVMQ--GVGCSILNPVTAADYAERGLTVRDF--------APEVHFEYMLFTPKLRPMSQV 280 Query: 304 IVWLRETIKNLYASM 318 +++ +M Sbjct: 281 AAAFIAVLESHRDAM 295 >UniRef50_C8XBJ1 Transcriptional regulator, LysR family n=1 Tax=Nakamurella multipartita DSM 44233 RepID=C8XBJ1_NAKMY Length = 303 Score = 213 bits (545), Expect = 5e-54, Method: Composition-based stats. Identities = 49/309 (15%), Positives = 95/309 (30%), Gaps = 21/309 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L + +E S T+AA+R VT +S + L + LF +P G+ T Sbjct: 1 MELRSLEYFVAVAEELSFTRAAQRCYVTQPTISAQVQALEREVGESLFDRTPRGIVLTDG 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTP-RGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 ++ + + + + + + L ++ QR+P Sbjct: 61 GRTLLPYARRCLAAVADAKAEFSARAGLLRGALHVGTGGGIEHTTVPTLLGRMRQRHPGI 120 Query: 127 TIKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 I + LD + +G ++ R + LP AI +F+D Sbjct: 121 DIHVTEATSAPLLDMVLQGRLNAAVIARPAE--------PLPAAITASAMFTDRLVAVFD 172 Query: 186 KDH-PALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 D P L P I+ L++V E+G T+ + L Sbjct: 173 PDAIPLPGDPVPLGALAGQPIITYPRTSGLRARLEDVATEIGVTLTVNYVANDVRLQLAF 232 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 A + + ++ L L S + L+W + + Sbjct: 233 AREGVGVAIS----------AGSDPALSDLAGLTRRSISPSIGFDKILIWRNDLTPCAPL 282 Query: 305 VWLRETIKN 313 + + Sbjct: 283 RAFLQLWRE 291 >UniRef50_A3VL76 Putative LysR-family transcriptional regulator n=1 Tax=Rhodobacterales bacterium HTCC2654 RepID=A3VL76_9RHOB Length = 302 Score = 213 bits (545), Expect = 5e-54, Method: Composition-based stats. Identities = 48/318 (15%), Positives = 99/318 (31%), Gaps = 22/318 (6%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 S++ L L L +Q + + ++ AA+ +N+T SA S + + LF + L Sbjct: 4 MSVSRLTLKQLRAIQQVYRTGQISAAAEALNITQSATSVLIRQAETVLGATLFERTTRSL 63 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQIYQ 121 +P+ S+ + + + L + + L A + +L ++ Sbjct: 64 APSAAGESVIGLVERILGDLSTLEETIRGLRDLERGRIRLTATPATGLTLLPETVRRFRA 123 Query: 122 RYPQATIKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 YP ++ L + D I D G + +D++ L SD Sbjct: 124 AYPAVSLILDDCAPDQFYSNIIEQRADFGIGTEPEDKSA----------LDWQSLNSDPL 173 Query: 181 CVWLRKDHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFE 239 C+ DHP + P I + ++ L +L + + Sbjct: 174 CIICAVDHPFAERDCVGWRELKDQPLILSRRDYGVRGMVETTLAKLNIRARVVAEVGFLG 233 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 + +M + A P + V L + L+ +R++ Sbjct: 234 SAAWM--SACGIGFAILPGRLARAQPAPGIRSVPL-------VDPVVARDAGLVKRRRHT 284 Query: 300 HNPKIVWLRETIKNLYAS 317 + E + Sbjct: 285 LSHSAERFIEMLAEDLQE 302 >UniRef50_A4T9R9 Transcriptional regulator, LysR family n=8 Tax=Corynebacterineae RepID=A4T9R9_MYCGI Length = 303 Score = 213 bits (545), Expect = 5e-54, Method: Composition-based stats. Identities = 49/311 (15%), Positives = 93/311 (29%), Gaps = 25/311 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L +++E T+AA R V AVS + +L PL + + T Sbjct: 1 MELRQLEYFVAIVEEGGFTRAASRERVAQPAVSAQIRRLERSVGQPLLTRTSREVRLTRA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTP-RGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 ++ + + + L + + L + + +P Sbjct: 61 GEALLPHARAALAAVRDGRAAVDDVAGLLRGSVAIGTV-TLHPMNVAHLIAEFHADHPDV 119 Query: 127 TIKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 I L D + + G +D+ ++ V+ + + Sbjct: 120 EITLGTATSDVLIAELGDGRLDLAIVSIAVDEDL--------PGLEVAVITDEAVEAAVA 171 Query: 186 KDHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 HP ++ +L+ R+P IS+ LD G IA + + Sbjct: 172 DGHPLAHRRSLSLEQLSRHPLISLPAGTGLRTRLDTACAAAGLRPRIAFEATSPAELAEL 231 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 A L +A P+ L AL L +L W ++ P Sbjct: 232 ARH--GLGVAILPQSMAR----GGSGLHALRLA------PELRGRLVWAWRADGAN-PAA 278 Query: 305 VWLRETIKNLY 315 L E + + Sbjct: 279 RVLGERARAMA 289 >UniRef50_Q7WJM8 Probable LysR-family transcriptional regulator n=2 Tax=Bordetella RepID=Q7WJM8_BORBR Length = 323 Score = 213 bits (545), Expect = 6e-54, Method: Composition-based stats. Identities = 48/300 (16%), Positives = 99/300 (33%), Gaps = 21/300 (7%) Query: 20 MQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSMEQNLAEWM 79 + ++T+ A ++ A+SK L L A LFV P G++PT ++ + + Sbjct: 41 CETGNLTEVANEYGISQPALSKWLKDLEADIGQRLFVREPRGVTPTACARELQAHARAII 100 Query: 80 QMSNLLLDKPHHQT-PRGLKFELAAESPLMMIMLNALSKQIYQRYPQATIKLRNWDYD-S 137 H + + ++L ++ YP + + D Sbjct: 101 GRLERARTAVDHIASGFAGHLSVGFSPVVGPVVLPESIRRFRAAYPDVLVSVIEASIDLL 160 Query: 138 LDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPAL-HQTWN 196 L + G+ DI E +P + E L+ + C+ + HP + + Sbjct: 161 LPGLRNGDFDIVVGRLEEVA--------MPEDVRCETLYDEPVCLVAGRAHPLAGRRRIS 212 Query: 197 LDTFLRYPHISICWEQSDTWALDNVLQELGRE-RTIAMSLPEFEQSLFMAAQPDNLLLAT 255 + YP IS L+ L G+ A+ + ++ + + D + Sbjct: 213 WEDAQAYPWISPQQGTPLRMRLEMELAVAGQPLPRHAVESTSVQTNVALLDRSDMIAP-M 271 Query: 256 APRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWLRETIKNLY 315 + R +++ + L ++ L L P +LW H ++ Sbjct: 272 SRRLAEHFQRQGVLRILPLTL--------GSGGPIGMLWRADGVHGTHTAHFIACLRQAV 323 >UniRef50_A6V1Z2 Transcriptional regulator, LysR family n=13 Tax=Proteobacteria RepID=A6V1Z2_PSEA7 Length = 300 Score = 213 bits (544), Expect = 6e-54, Method: Composition-based stats. Identities = 41/309 (13%), Positives = 96/309 (31%), Gaps = 23/309 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++ L ++++ S T+AA+ + + S +SK +A+L + + + T Sbjct: 1 MEFRQLRSFVEVVRQGSFTQAAQVRHASQSTISKQVAQLEQSLGVQVLERNGPHVRLTDA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + E +++ LL + + + L + + +RYP Sbjct: 61 GAVVFRRAEEMLRLRRDLLSELDDLSQLNRGELRLGLPLLGADALFAQRFAEYRRRYPNI 120 Query: 127 TIKLRNWDYDSLD-AITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + L +++ A+ GE+++ L+ DY+ ++ V L Sbjct: 121 AVHLVEGGSKTMEQAVLAGELELA-----------GSLTPADDGFDYQPFCNEPLDVLLP 169 Query: 186 KDHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 HP + L P + + L E G + + + Sbjct: 170 AGHPKASAASVALGELADSPFLLYQQSFTLNDRLLRACLEAGFSPREGGRSGQADFLGAL 229 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 A + PR + + V ++ L +W + + Sbjct: 230 VAANQG--VVLLPRVIAREIERPGVVRV-------LLREPDLRWDIAFIWRRGGYLSRAA 280 Query: 305 VWLRETIKN 313 E ++ Sbjct: 281 QAWLELLRE 289 >UniRef50_C1DSG7 Transcriptional regulator, LysR family n=1 Tax=Azotobacter vinelandii DJ RepID=C1DSG7_AZOVD Length = 299 Score = 213 bits (544), Expect = 6e-54, Method: Composition-based stats. Identities = 48/313 (15%), Positives = 92/313 (29%), Gaps = 28/313 (8%) Query: 1 MKKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPL 60 M I+ L L+ + S T+ +++++++ A+S S+ KL L + Sbjct: 1 MLMDIS---FRQLRAFILIAETSSFTRTSEQLHLSQPALSYSIRKLEDALGLRLLARNTR 57 Query: 61 GLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQI 119 + TP ++ + + H L A L + Sbjct: 58 SVELTPAGEHFLPQARRMLRDMDDAIRDAHEALNLIRGTIRLGALPTAAASFLPGVIAAF 117 Query: 120 YQRYPQATIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSD 178 + +P I LR+ + + GEVD G + L + V + Sbjct: 118 GRDHPGVKISLRDGRAGEVKAWVQNGEVDAGITSLPEDLSGLGFEPLLDDNLVLLV-RQE 176 Query: 179 VPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEF 238 A + T P+I++ + S D L+ LG A + Sbjct: 177 G----------ASKEPDTWKTL---PYIALTADTSIRPLADEALRHLGVTTQPAWEVAHM 223 Query: 239 EQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRN 298 + + + + + P C + L LP+ LL K Sbjct: 224 STAAALVRE--GIGFSLLPASCTTFL-HIGADLSVLPIEQPT------RRSLGLLQRKPI 274 Query: 299 SHNPKIVWLRETI 311 P + + Sbjct: 275 GQTPSMKAFLSHL 287 >UniRef50_A6VUW1 Transcriptional regulator, LysR family n=2 Tax=Marinomonas RepID=A6VUW1_MARMS Length = 321 Score = 213 bits (544), Expect = 6e-54, Method: Composition-based stats. Identities = 78/314 (24%), Positives = 151/314 (48%), Gaps = 19/314 (6%) Query: 4 SITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLS 63 ++ +DLNLL Q+L++E +VTKAA R+NV+ AVS+SL++LR F+DPLF+ + GLS Sbjct: 20 RLSDIDLNLLYVFQVLIEELNVTKAATRLNVSQPAVSRSLSRLRDVFNDPLFIRTSHGLS 79 Query: 64 PTPLMVSMEQNLAEWMQMSNLLLDKP-HHQTPRGLKFELAAESPLMMIMLNALSKQIYQR 122 T + LA+ ++ L+ +F L+ + +L + + Q+ Sbjct: 80 ATAKTQDLAPLLADTLKGLESLIQPSEFTPQSSKRRFILSTTDFGTLTVLPKILDKFRQK 139 Query: 123 YPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCV 182 P A + +++W+ D + + + +D+ + P I L SD Sbjct: 140 APDAILDVKSWNEDMVAELDQTNIDVAVAVL---------SKEPPAGIRAMRLKSDRMVC 190 Query: 183 WLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 RK+HP + L+++L+ H+ + + + +A+D L+++G +R +++ LP F + Sbjct: 191 LARKNHPRIEGKLTLESYLQVSHVQVVLGRREYFAVDRELEKMGHKRHVSVHLPNFVPAA 250 Query: 243 FMAAQPDNLLLATAPRYCQYYNQL-HQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 + D LLL + + ++ + LP E ++++WH+R H+ Sbjct: 251 RVVMDSD-LLLTVPKLFAEDMAATVSEIVVHELPFASR-------EFDYSMIWHERFQHD 302 Query: 302 PKIVWLRETIKNLY 315 VW R ++ + Sbjct: 303 AAHVWFRGLLRQAF 316 >UniRef50_A5G0H6 Transcriptional regulator, LysR family n=1 Tax=Acidiphilium cryptum JF-5 RepID=A5G0H6_ACICJ Length = 303 Score = 213 bits (544), Expect = 6e-54, Method: Composition-based stats. Identities = 43/296 (14%), Positives = 81/296 (27%), Gaps = 23/296 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 + L+ L + + VT+AA+ + +T SA S ++A L F LF G++ T Sbjct: 1 MTLDQLRIFIAVAEREHVTRAAEALGLTQSAASGAVAALEREFGTRLFHRVGRGIALTEA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + + + A + L Q YP Sbjct: 61 GRVFFTEARAILNRTEQAALTMREIAGLARGRLAIKASQTIANHFLPLRLVAFRQAYPGI 120 Query: 127 TIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + + + AI G+V++GF + + E + D + + Sbjct: 121 GLAVSIGNSAEVARAILEGDVELGFVEGPGDT-------LIQPRLAAEPIAQDRLVMVVA 173 Query: 186 KDHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGR---ERTIAMSLPEFEQS 241 HP + + L L LG +A+ LP Sbjct: 174 PGHPWAKRRALRPAELASGSWVLREDGSGTRAVLFEALAGLGIDHAAVDVAIELPANNSV 233 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKR 297 L +V +P+ + + H+ Sbjct: 234 LTAV--SGGAGATILSELVCADALAAG-KVVEVPVKLP-------RRTYFAVQHQD 279 >UniRef50_A4XEX1 Transcriptional regulator, LysR family n=2 Tax=Sphingomonadaceae RepID=A4XEX1_NOVAD Length = 299 Score = 213 bits (544), Expect = 6e-54, Method: Composition-based stats. Identities = 41/275 (14%), Positives = 88/275 (32%), Gaps = 15/275 (5%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +DL L L + + +AA+R++++ ++ ++ KL LF P G+ T Sbjct: 1 MDLRQLRYFSTLAETLNFHRAAERLHMSQPPLTVAIRKLEEDLGVALFERDPRGVRLTAA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHH-QTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + E + + + + + + + ++ + Q YPQ Sbjct: 61 GRAALDPAREALAAAERVREVVRQGAAGLRGRLSIGFIGSAIGELVPRIVSPFRQAYPQV 120 Query: 127 TIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + L + + + AI +D+G S ++ +V+ DV + Sbjct: 121 ELVLEEMNSVEIVRAIAARRLDLGLVRLPVLDSSP---------VEIDVIERDVLVAAIP 171 Query: 186 KDHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 ++ + L I A Q G +A + + L + Sbjct: 172 REDALARRREVALGDLSERSFILYSSVSVLHAATRLACQRAGFVPRVAQEATQVQTILSL 231 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFD 279 L +A P + + +V L P Sbjct: 232 VEA--GLGVALIPARSARFA-GAGVRIVPLAEPIP 263 >UniRef50_B4V0Q8 LysR-protein transcriptional regulator n=3 Tax=Actinomycetales RepID=B4V0Q8_9ACTO Length = 303 Score = 213 bits (544), Expect = 6e-54, Method: Composition-based stats. Identities = 44/320 (13%), Positives = 96/320 (30%), Gaps = 25/320 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L +++E T+AA R++++ +S + +L PL S ++ T + Sbjct: 1 MELRQLRYFVAVVEEGGFTRAAARLHLSQPGLSAQIGQLEKELGQPLLDRSNRSVTATEV 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTP-RGLKFELAAESPLMMIM--LNALSKQIYQRYP 124 ++ + ++ + T + L S + + + +P Sbjct: 61 GRAVLPYARAALAAADAVRQTVDEHTGLLRGRVTLGLVSGATSRAFDIASFLADFHGAHP 120 Query: 125 QATIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVW 183 I L A+ GE+DI G P I + + Sbjct: 121 ALEIALTEDTSARMQAALLSGEIDIALLGPTWEAP--------PPGISHRTVIDAPLVAA 172 Query: 184 LRKDHPAL----HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFE 239 + D P L + L I + AL+ + G +A + Sbjct: 173 VTSDDPLLAPADRSSVPLADLRGRALICLPRGTGVRAALERACAQAGFRPHVAFEAAAPD 232 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 +AA+ + + + L L + + + L W Sbjct: 233 VLARLAARGLGVAVLPL----GEEDPDFGGALRTLRI-----VEPGVRARIVLAWPATGP 283 Query: 300 HNPKIVWLRETIKNLYASMA 319 +P + ++ S++ Sbjct: 284 ASPAAQAFLDRLREALRSVS 303 >UniRef50_UPI00019F10A8 LysR family regulatory protein n=1 Tax=Citrobacter youngae ATCC 29220 RepID=UPI00019F10A8 Length = 304 Score = 213 bits (544), Expect = 6e-54, Method: Composition-based stats. Identities = 42/315 (13%), Positives = 95/315 (30%), Gaps = 19/315 (6%) Query: 7 TLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTP 66 L L L + ++KAA R +++ S+++ ++ L D LFV P G+ T Sbjct: 2 KFTLRQLEFYIALAETLQISKAAARCHISQSSMTIAMRNLEEALDVQLFVRYPKGVKLTA 61 Query: 67 LMVSMEQNLAEWMQMSNLLLDKPHHQTP-RGLKFELAAESPLMMIMLNALSKQIYQRYPQ 125 + + S +D H ++ + L ++ + I +R+P Sbjct: 62 EGERFLAHACNIINCSRSAVDALHDRSEILTGTVRIGIAETLSAYLIPDILNDIERRFPL 121 Query: 126 ATIKLRNWD-YDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 + + A+ +VD ++ E +W Sbjct: 122 LELVFHEATAPQLVQALREQKVDFCLL--------LTSNIGHDTDLEIETFIRSQRRLWT 173 Query: 185 RKDHPA-LHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 HP + L ++ P + + + + + Q+ G I FE Sbjct: 174 SIGHPLQSQSSIRLIDVVKLPFLLLETD-KYPDVIIDYWQQRGFTPNICFRSNSFEAIRS 232 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 + A+ + L L ++ + + V P+ Sbjct: 233 LVAKGRG--ITILSDLVYRPWSLDGLRVMHRTIDDFITWMDVGTVKIAA-----QPLTPE 285 Query: 304 IVWLRETIKNLYASM 318 + + + ++ + Sbjct: 286 AMKVIDFLRQAITRL 300 >UniRef50_B7K2F2 Transcriptional regulator, LysR family n=8 Tax=Cyanobacteria RepID=B7K2F2_CYAP8 Length = 324 Score = 213 bits (544), Expect = 6e-54, Method: Composition-based stats. Identities = 46/319 (14%), Positives = 92/319 (28%), Gaps = 22/319 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 + + L + + + +AA++ VT S +S+ + L LF + T Sbjct: 1 MRIEQLQAFLTIAETGNFGQAARQCGVTQSTISRQIQALEGTLGALLFHRTA-QAKLTIA 59 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRGL-KFELAAESPLMMIMLNALSKQIYQRYPQA 126 M + Q + + + +AA + L + +Q YP Sbjct: 60 GEKMLPRAKKICQEWETINQEIADLQGGKQPELCVAAIHSVCSHYLPPILQQFCHDYPHV 119 Query: 127 TIKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 +++ D +L + G VD+ + + E+L+S+ V + Sbjct: 120 QLRVTALGSDRALKVLRDGLVDVAIV-------MNNRFLTTSPEMVVEILYSENIEVLMA 172 Query: 186 KDHPALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 DHP YP + + L I M L + + Sbjct: 173 ADHPLTQFNEIPWSELAHYPQVVFKEGYGMQRLVQEWLTTQNISLKIVMELNTLDAFRGI 232 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQ-LPLVALP--------LPFDESQQKKLEVPFTLLWH 295 Q + ++A P + + L + L L L+ Sbjct: 233 VRQGE--IIALLPETALIEARQDRSLAVRPLAKITEDFLTHESPHKMITNLTREVVLVTT 290 Query: 296 KRNSHNPKIVWLRETIKNL 314 P I + ++ Sbjct: 291 SDRLTIPPINHFCQLVQQH 309 >UniRef50_A1W6X9 Transcriptional regulator, LysR family n=19 Tax=Burkholderiales RepID=A1W6X9_ACISJ Length = 310 Score = 213 bits (544), Expect = 6e-54, Method: Composition-based stats. Identities = 42/318 (13%), Positives = 86/318 (27%), Gaps = 32/318 (10%) Query: 7 TLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTP 66 + + L +R+ T+AA + +++ A S + L LF S +S T Sbjct: 2 NVSTRQIDAFLALAAQRNFTRAAAQCHLSQPAFSALIRALEDDLGLRLFDRSTRHVSLTA 61 Query: 67 LMVSMEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQIYQRYPQ 125 + + + L + +A L L + ++P Sbjct: 62 EGENFHASALRIRAEVDAALATLRDAALLRRGRVSVALLPSLAAGWLPGVLAGFRAQHPG 121 Query: 126 ATIKLRN-WDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 + + + ++ + G+ D + + + E D + Sbjct: 122 VELDIADVLSEPCIERVATGKADFALAAIRADTP----------ELQAEPFCEDGFHLVC 171 Query: 185 RKDHPALHQTWN---------LDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSL 235 R DHP Q +P I + S L+ M + Sbjct: 172 RADHPLARQPLPAGRRSAAAQWRALAEWPFIHLARHSSVRQYLEAAFHPH--AMRTLMEV 229 Query: 236 PEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWH 295 + + M L ++ P ++ Q L L L L L+ Sbjct: 230 EQLATVMGMVRA--GLGISVVPTLTLFHFQQEGLATRPLAL-------PGLTRQIYLVRR 280 Query: 296 KRNSHNPKIVWLRETIKN 313 + + L + Sbjct: 281 RDRGLSVAAQALYARVMQ 298 >UniRef50_Q13JN6 Transcriptional regulator, LysR family n=7 Tax=Burkholderiales RepID=Q13JN6_BURXL Length = 312 Score = 213 bits (544), Expect = 6e-54, Method: Composition-based stats. Identities = 46/308 (14%), Positives = 92/308 (29%), Gaps = 27/308 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +D+ L L + R +AA R+N++ +S+ LA L A L SP ++ T Sbjct: 26 IDIKPLRYFVTLAETRHFGRAAARLNLSQPPLSRQLAALEASVGVTLVERSPRSVTLTAA 85 Query: 68 MVSMEQNLAEWMQMSNLLLD-KPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + + K + ++ ++ +P+ Sbjct: 86 GERFYADAKAILTAVEQAVSNAQAAAQGEAGKLAIGFTMCAAYSVVPGYARVFGAAFPEV 145 Query: 127 TIKLRN-WDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + LR D + + G +D + + S+ CV L Sbjct: 146 ALNLREVVSNDLAEQVLAGHIDAAIMFPNVP----------DKGLATRTIVSEPLCVALS 195 Query: 186 KDHPALH-QTWNLDTFLRYPHISICWE--QSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 + HP + + P + E + + + G E I + + L Sbjct: 196 RSHPRARARRLKIAQLAGEPFVLASGEVAPTLRATILEHCRSGGFEPDIRFEVQLQQTVL 255 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 + + + +A P + QL + L + L W + NP Sbjct: 256 SLV--DEGVGVALVPASMRK-AQLAGVVFRPL--------VDAPLIEQVLAWSP-ANRNP 303 Query: 303 KIVWLRET 310 + E Sbjct: 304 CLARFLEL 311 >UniRef50_C7PZR8 Transcriptional regulator, LysR family n=1 Tax=Catenulispora acidiphila DSM 44928 RepID=C7PZR8_CATAD Length = 301 Score = 213 bits (544), Expect = 6e-54, Method: Composition-based stats. Identities = 46/317 (14%), Positives = 90/317 (28%), Gaps = 29/317 (9%) Query: 1 MKKSITTLD---LNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVN 57 M+ +D L L L R +T A + V+ +S++LA++ A LF Sbjct: 1 MRIDRRIVDAVLLRDLSWFVALADHRHMTDTAAILGVSQPTLSRALARVEAELGTRLFER 60 Query: 58 SPLGLSPTPLMVSMEQNLAEWMQMSNLLLDKP-HHQTPRGLKFELAAESPLMMIMLNALS 116 +P G++P P + + + L + P G LA + ++ L Sbjct: 61 APDGVAPNPNGDLVVAAARDLLARYEQLTTELSARLDPDGGVVRLAFLDSMGTSLVPQLL 120 Query: 117 KQIYQRYPQATIKL-RNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVL 175 + + P + L + + L + G ++ + + L Sbjct: 121 RAFHLHAPGVRVLLSQEPGHAILADLRTGAAELAVTFPRPAG-----------DFGWLPL 169 Query: 176 FSDVPCVWLRKDHPA-LHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMS 234 + + + H + L + +D +L E G I+ Sbjct: 170 HRERLVLAVPPTHRLHARKRVALSELADEELVMTPVGFGFRTLVDRLLAEAGVVPRISFE 229 Query: 235 LPEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLW 294 + + A L +A P + + L L W Sbjct: 230 SADLSTIEGLVAA--GLGVAVIPEQLVGPSGTVAIAL----------TTPAARRTVGLTW 277 Query: 295 HKRNSHNPKIVWLRETI 311 + P I Sbjct: 278 RTDQALAPAAARFLAFI 294 >UniRef50_B4WIK9 LysR substrate binding domain protein n=1 Tax=Synechococcus sp. PCC 7335 RepID=B4WIK9_9SYNE Length = 316 Score = 213 bits (544), Expect = 6e-54, Method: Composition-based stats. Identities = 52/315 (16%), Positives = 98/315 (31%), Gaps = 25/315 (7%) Query: 6 TTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPT 65 + L+ L L + + + ++AA + ++ SAVS ++A L + LF G T Sbjct: 7 NRVKLSQLQILVAVAEYGNFSEAALSLGISQSAVSHAIASLENYLGIVLFNRGRHGAILT 66 Query: 66 PLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNALSKQIYQRYP 124 P+ + + ++ +L + + +A+ + +L K +Q+ P Sbjct: 67 PVGDRILMHAKTITNSTDAILQEAAAAKGLEKGQVRIASFRSISTHILPKAIKTFHQKLP 126 Query: 125 QATIKLRNWDY--DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCV 182 TI L D A+ G DIG + + L D V Sbjct: 127 GITISLTEHDTNKAVEQALKEGRADIGIVLMPAGE-----------GLTAWELLQDEFVV 175 Query: 183 WLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 L D + P I + + + LG + + + Sbjct: 176 LLSPDTHLEGNSLTWRELSEQPLIMSPIDYPAMRPVYEHINALGYWLNVVNEVETDAAIV 235 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 + Q L P+ + + +LP P + P Sbjct: 236 NLVEQ--GLGGTILPKLAAE-PIPEAVQVFSLPEPL--------MRMIGVAIATETLQPP 284 Query: 303 KIVWLRETIKNLYAS 317 + L ET+K + S Sbjct: 285 PVYALLETLKEIATS 299 >UniRef50_C0WBX8 Transcriptional regulator n=3 Tax=Firmicutes RepID=C0WBX8_9FIRM Length = 293 Score = 213 bits (544), Expect = 6e-54, Method: Composition-based stats. Identities = 46/308 (14%), Positives = 92/308 (29%), Gaps = 27/308 (8%) Query: 14 LCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSMEQ 73 L+ +++ S TKAA + T S++S+ +A L L + S G++ T + Sbjct: 9 KALRTVLRLGSFTKAAHALGYTQSSISQMMASLEEELSFKLLIRSRNGITLTQEGQQLYP 68 Query: 74 NLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQIYQRYPQATIKLRN 132 L + + + +K + S + + L K RYP + Sbjct: 69 FLEQVLHSYEAMEEKAREIRGLETGVIRVGTISSITCRWMPPLIKGFKARYPNVKFTFQQ 128 Query: 133 WDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPAL 191 DY + + I G +D GF + + L + H Sbjct: 129 GDYRLIPEWIELGIIDFGFVS-----------PDSCPHLMTIPVKDGELLAVLPRRHRWA 177 Query: 192 H-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQPDN 250 + L+ L P I + Q+ G + +A L + + M Sbjct: 178 KEKAIPLEGLLSDPFILLEEGN--YSEPMEAFQKKGIKPHVAYRLHDDYAIMTMVEAGLG 235 Query: 251 LLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWLRET 310 + + + + +V +P+ L + + + Sbjct: 236 VSI-----LAKLMTDRNPYDIVTVPI------DPPLYRHLAICYKDWDLLPLASKHFITY 284 Query: 311 IKNLYASM 318 IK + Sbjct: 285 IKEKADEL 292 >UniRef50_B1ZJS2 Transcriptional regulator, LysR family n=8 Tax=Alphaproteobacteria RepID=B1ZJS2_METPB Length = 336 Score = 213 bits (544), Expect = 7e-54, Method: Composition-based stats. Identities = 44/320 (13%), Positives = 79/320 (24%), Gaps = 30/320 (9%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 +++ L L L + + E +AA+R NV+ +S + KL LF S + Sbjct: 1 MNLSGLSLRDLEYVVAVADEGHFGRAAERCNVSQPTLSVQVRKLENALGLTLFERSNRRV 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTP--RGLKFELAAESPLMMIMLNALSKQIY 120 T + + + + LL + LAA L + + + Sbjct: 61 LLTVAGQGIVRQARVVLGEAQRLLALAVEGRGSPLTGRLVLAAIQTLGPYYFPLVLRLLR 120 Query: 121 QRYPQATIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 Q +P T+ L + LD + G +D + LF + Sbjct: 121 QEFPLLTLALSEARTAEILDGLRDGRIDAALVSLPVAAS----------GLTVSPLFVEP 170 Query: 180 PCVWLRKDHPALHQTWNLDT-FLRYPHISICWEQSDTWALDNVL---QELGRERTIAMSL 235 + DH + + + GR Sbjct: 171 FRLACPADHAFAQGAPPRAENLNGPDLLLLDEGNCLRDQTIAACGTLRGAGRH------A 224 Query: 236 PEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWH 295 E M A P V + + L W Sbjct: 225 TSLETLRSMVAAGAGY--TLIPALAVPAGPDPSGLTV-----MRHFEGEGPGRTVALAWR 277 Query: 296 KRNSHNPKIVWLRETIKNLY 315 + + L + Sbjct: 278 SSDPRAAGLAHLAAFFRAHA 297 >UniRef50_Q1AVK2 Transcriptional regulator, LysR family n=1 Tax=Rubrobacter xylanophilus DSM 9941 RepID=Q1AVK2_RUBXD Length = 311 Score = 213 bits (544), Expect = 7e-54, Method: Composition-based stats. Identities = 50/311 (16%), Positives = 97/311 (31%), Gaps = 22/311 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 + L L ++E S++ AA+R+ + +VS+ LA+L PL V S G+ PT Sbjct: 1 MRLRFLEAFCAAVEEGSISGAARRMYLAQPSVSERLAELEREARVPLLVRSRRGVEPTEQ 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQT-PRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + + + + R + +AA S L + A + +R+P Sbjct: 61 GRLLYERARRVLDEVERVEEVLRSLRVRREARLYVAASSTLGEHLFPAWLRGFRERHPGV 120 Query: 127 TIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 ++ + + + + RG V G ++ L D V +R Sbjct: 121 IPEVFVGNTKEVVALVGRGTVAFGVIEGGEVRGP----------LESVPLLEDELVVVVR 170 Query: 186 KDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMA 245 HP + R P IS ++ + + G + M L Sbjct: 171 PGHPWARRGVRPQELSREPFISREKGSGTREVVERAISDRGLSLDVRMELGSTSAIKEAI 230 Query: 246 AQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIV 305 L + R ++ + FTL+ + N Sbjct: 231 EA--GLGFSLLSREAIRLELGAG--------HLAVARGFSVSRRFTLIRNPSAELNATEQ 280 Query: 306 WLRETIKNLYA 316 + + + Sbjct: 281 GFCDYLLGICR 291 >UniRef50_A1W2J2 Transcriptional regulator, LysR family n=25 Tax=cellular organisms RepID=A1W2J2_ACISJ Length = 306 Score = 213 bits (544), Expect = 7e-54, Method: Composition-based stats. Identities = 45/317 (14%), Positives = 112/317 (35%), Gaps = 25/317 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +DL + + +ER+ T+AA+R+++ +S+ + L PLF+ +P G+ T Sbjct: 1 MDLKDMRQFLAVAEERNFTRAAERLHMAQPPLSRQIKALEDEMGAPLFLRTPAGVELTEA 60 Query: 68 MVSMEQNLAEWMQMSN-LLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 ++ + + + + ++ ++ ++ + + + + P+ Sbjct: 61 GQALLDEVPNLLHLVQRAAERTRRAAQGLTGQLDVGIYGSGVLNVIPRVLSKFHAQRPEV 120 Query: 127 TIKLRNWD-YDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 I L N + L A+ + +GF+ + E + + V + Sbjct: 121 RIALHNLTKSEQLQALRERRISVGFNRLVPPEP----------DLVVESVLREPLLVAMH 170 Query: 186 KDHPALHQT-WNLDTFLRYPHISICWE--QSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 + HP + + P I E + ++ G + + + ++ Sbjct: 171 EAHPLAQRRQVGMADLDGLPMILYPNEAIHGLAQEVAEAFRQEGVRLAVEQDVEDVVTAV 230 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 + A L +AT R +L + V L + ++ + L+ + +P Sbjct: 231 ALVASGFGLTIAT--RSAASL-RLPGVVFVPL------RSRHLKDLELSCLYRRG-DPSP 280 Query: 303 KIVWLRETIKNLYASMA 319 + E ++ S A Sbjct: 281 VLAMFLEVVRAHGKSEA 297 >UniRef50_Q4K3G6 Transcriptional regulator, LysR family n=12 Tax=Pseudomonas RepID=Q4K3G6_PSEF5 Length = 315 Score = 213 bits (544), Expect = 7e-54, Method: Composition-based stats. Identities = 43/310 (13%), Positives = 92/310 (29%), Gaps = 22/310 (7%) Query: 7 TLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTP 66 L L L + RS ++AA +++T AVS + +L PLF L T Sbjct: 2 RLTLRQLQIFNEVCDLRSYSRAADEMSLTQPAVSLQIRQLEELIGQPLFDYVGKKLYMTE 61 Query: 67 LMVSMEQNLAEWMQMSNLLLDKPHHQTP-RGLKFELAAESPLMMIMLNALSKQIYQRYPQ 125 ++++ + L + + +LA + L +++P+ Sbjct: 62 AAEALQRASRDIFGRLENLDMQLSDMQGSLQGQLKLAV-ESSAKYFVPHLFAAFKRQHPE 120 Query: 126 ATIKLRNWD-YDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 ++L + + ++ D+ + +++ ++ Sbjct: 121 VHLQLTVVNRSQVIRRLSDNRDDLVIMSMVPQ----------DMELEFLPFLNNPIVAVA 170 Query: 185 RKDHPALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 +HP H L Y + A + +E T + + E Sbjct: 171 PPEHPLSHMGPLRLQDLEPYTLVLREQGSGTRLACEEYFKEKRVHFTQILEVSSAEAQRE 230 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 L +A R+ L+ LP+ + L+ K +P Sbjct: 231 CVRA--GLGVALLTRHALNLELATG-GLIELPVEELPLL-----RSWCLVQAKAKRLSPV 282 Query: 304 IVWLRETIKN 313 I++ Sbjct: 283 AHAFLGFIRS 292 >UniRef50_B1ZVT1 Transcriptional regulator, LysR family n=3 Tax=Verrucomicrobia RepID=B1ZVT1_OPITP Length = 321 Score = 213 bits (544), Expect = 7e-54, Method: Composition-based stats. Identities = 39/317 (12%), Positives = 97/317 (30%), Gaps = 21/317 (6%) Query: 6 TTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPT 65 LD LL L + +S T AAK + +T SAVS ++ L A L + + T Sbjct: 10 RPLDSRQLLAFAALARCQSFTLAAKELFLTQSAVSHAIKALEAEVGSRLVDRANRRVLLT 69 Query: 66 PLMVSMEQNLAEWMQMSNLLLDKPHHQTP-RGLKFELAAESPLMMIMLNALSKQIYQRYP 124 +++ + ++ + + + A + +L + ++ Q +P Sbjct: 70 QAGEQFLRHVEKILREMEAARAGLDALSRWGHGRLRVGASTTACQYLLPTVLREFKQSFP 129 Query: 125 QATIKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVW 183 ++ I + D+ ++ + +D+ + D+ LF D + Sbjct: 130 KSVITIEPGDHATQVELLQSNRIDLAIMLQPETRG----------EFDFVPLFQDELRLL 179 Query: 184 LRKDHPALHQ-TWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 H + Q + + + + ++ + L + Sbjct: 180 TSPVHAWVQQERTTPGSLAAETIVLYNKASYTFRLVTDYFRQERMTIGHFIELGSMDAIK 239 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 + + + AP + + L L +K+L + + + + Sbjct: 240 ELVKIGVGVGV-LAPWVARAELENGALVSFPL-------GRKRLRRTWGIAYLRGRRLPL 291 Query: 303 KIVWLRETIKNLYASMA 319 +++ Sbjct: 292 GEETFIGLCRSVTEHFG 308 >UniRef50_C7RKX8 Transcriptional regulator, LysR family n=20 Tax=Proteobacteria RepID=C7RKX8_9PROT Length = 310 Score = 213 bits (544), Expect = 7e-54, Method: Composition-based stats. Identities = 72/315 (22%), Positives = 126/315 (40%), Gaps = 21/315 (6%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 ++T DLNLL+ L +L+ E SV +AA+R+ ++PSA+S++LA+LRA DPL V + GL P Sbjct: 1 MSTADLNLLVTLDVLLAEGSVARAAQRLRLSPSAMSRALARLRATTGDPLLVRAGRGLVP 60 Query: 65 TPLMVSMEQNLAEWMQMSNLLLDKPH--HQTPRGLKFELAAESPLMMIMLNALSKQIYQR 122 TP + + + + +Q + L + L + L ++ ++ Sbjct: 61 TPRALELREQVGPLVQAAEAALRPVEKLDLERLVRMYTLRTSEGFVENFGPDLIARVAEQ 120 Query: 123 YPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCV 182 P + + + G VD+ + + + + + LF D Sbjct: 121 APGVRLCFVQKSNKNSAPLRDGSVDL---------ETGVVGKATAPELRVQALFRDRFIG 171 Query: 183 WLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 +R HP + HI + D +D L+ LG ER I + F +L Sbjct: 172 VVRMGHPLSQGEMTPHRYATGKHILVSRRGFDRGMIDEALKPLGLERQIVTIVSGFSTAL 231 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 +A D + + R+ + LP+ E +L WH R +P Sbjct: 232 VLARASDLIA-SVPERHTAKL--RAGMHSFPLPIATPEI-------TVSLHWHPRMDADP 281 Query: 303 KIVWLRETIKNLYAS 317 WLR ++ + Sbjct: 282 AHRWLRGCVREVCGE 296 >UniRef50_A1TIM2 Transcriptional regulator, LysR family n=2 Tax=Acidovorax RepID=A1TIM2_ACIAC Length = 308 Score = 213 bits (543), Expect = 8e-54, Method: Composition-based stats. Identities = 42/308 (13%), Positives = 92/308 (29%), Gaps = 23/308 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L + + +T++A + VT S +S L +L A PLF GL + Sbjct: 1 MELRQLRYFLSVAETEHLTQSADALFVTQSTLSHGLRQLEAELGLPLFDRLGRGLKLSQA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNALSKQIYQRYPQA 126 ++ + A +Q + + ++ YP Sbjct: 61 GMAFRSHAARALQELEAGRMALADMAGLQAGTLTVGVIPTFLTHLVPDAVAAFSADYPGV 120 Query: 127 TIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + +R+ + + G +D+G S +H I+ E LF + + + Sbjct: 121 QVVVRDLRGGPIEEQLIAGRLDVGISFHPAHR----------EEIEAEPLFEERLQLVVH 170 Query: 186 KDH-PALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 H A +T P + + +D + G + + + + L Sbjct: 171 AGHALARRRTLRTRELAGVPLALLPRSFATRRMIDAAFAQAGVVPVVRVEMESVDALLHA 230 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 +A + + A+ + +LW + S + Sbjct: 231 CRGGPLATIA-----AERAAGQAGPDMRAI-----TLTEPATVRRAGVLWRRGASRSAAA 280 Query: 305 VWLRETIK 312 ++ Sbjct: 281 REFVARLR 288 >UniRef50_B9QX96 LysR substrate binding domain protein n=1 Tax=Labrenzia alexandrii DFL-11 RepID=B9QX96_9RHOB Length = 311 Score = 213 bits (543), Expect = 8e-54, Method: Composition-based stats. Identities = 41/311 (13%), Positives = 87/311 (27%), Gaps = 20/311 (6%) Query: 11 NLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVS 70 L L +E KAAK+ +V+ +S L D L G+ T Sbjct: 8 RQLEYFIALAEEGHFGKAAKKCHVSQPTLSNQFKLLEDSVDTTLVERGTTGVRLTAAGER 67 Query: 71 MEQNLAEWMQMSNLLLDKPHHQTP-RGLKFELAAESPLMMIMLNALSKQIYQRYPQATIK 129 + +++ + + G L S + L + +YP+ + Sbjct: 68 LLPLARHALEVLDDFVTAAEAGRENLGGLIRLGVPSTFGPYFMPYLLPILKSKYPELELY 127 Query: 130 LRNWDYDSLD-AITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDH 188 +R L+ I G +D S + + L + + + + H Sbjct: 128 IREDRPVVLEQQILDGTLDCIISPDLAGS----------ERLQVLKLCQEELSLAVPRTH 177 Query: 189 PALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQ 247 P + +D +++ + ++ + G + + M Sbjct: 178 PLSGLEVIPVDMLQGERLLTLSQGFRLHDDVQSLARASGADFRQDYEGTSLDALRQMV-- 235 Query: 248 PDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWL 307 + L P Y + + + K + W + ++ + L Sbjct: 236 SIGMGLCLFP--AAYIASEFG---KEPDIVLKQVAEMKTRRTICIAWRRNSARHNHFQTL 290 Query: 308 RETIKNLYASM 318 E SM Sbjct: 291 YELSHEAIESM 301 >UniRef50_P94501 HTH-type transcriptional regulator gltR n=3 Tax=Bacillales RepID=GLTR_BACSU Length = 296 Score = 213 bits (543), Expect = 8e-54, Method: Composition-based stats. Identities = 42/310 (13%), Positives = 90/310 (29%), Gaps = 22/310 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +++ LL +E S++KAA +N S V+ + +L LF G++ TP Sbjct: 1 MNIQLLQVFLTTAREGSISKAALTLNYAQSNVTNKIQQLENDLQTKLFYRHSRGITLTPP 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQAT 127 + + + + + + + L L YP Sbjct: 61 GQILVSYSEKILHTIEEARAAMGESSAPSGPLRIGSMETTAAVWLPQLLAHYNNLYPNVD 120 Query: 128 IKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRK 186 + L + A+ E++ F + E + + + Sbjct: 121 LNLVTGPTEQQIQAVLHYELNGAFISGPIE----------HPDLVQEKVLDEEMVLVTSA 170 Query: 187 DHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAA 246 HP + ++ + S L+++LQE G M E + + Sbjct: 171 SHPVIS---SIQDVQTQTMLVFRKGCSYRAKLNHILQEEGLLPIKLMEFGILEAIIGCVS 227 Query: 247 QPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVW 306 L ++ PR ++ + K V + K P + Sbjct: 228 A--GLGISLLPRSIIASHEKEG------RIRSHTISDKYSFVSTMFIRRKDTLITPALSA 279 Query: 307 LRETIKNLYA 316 +++ + Sbjct: 280 FLTHMRDHFQ 289 >UniRef50_D1UHR2 Transcriptional regulator, LysR family n=1 Tax=Burkholderia sp. CCGE1001 RepID=D1UHR2_9BURK Length = 323 Score = 213 bits (543), Expect = 8e-54, Method: Composition-based stats. Identities = 45/318 (14%), Positives = 102/318 (32%), Gaps = 23/318 (7%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 I + L + + +MQ S T AA+ ++ + S VS+ + +L A LF S L Sbjct: 20 NEIDQMKLRQIEAFRAVMQAGSTTGAAEELHTSQSNVSRLITQLEADTRLVLFERSGGRL 79 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQIYQ 121 +P P ++ + + L + +A+ + M L + ++ Q Sbjct: 80 NPKPEAKALYREVERVFVGLKSLAYAADTIRNLGSGRLRIASIPGIGMSFLPRVVQRFRQ 139 Query: 122 RYPQATIKLRNWDYDSLD-AITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 P T+ + ++++ ++ D+G S + + ++ + Sbjct: 140 SRPDVTVSIHTNTSNTVEQWVSSQFCDVGIVAFVSAAATCQAIALPDAEV---------- 189 Query: 181 CVWLRKDHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFE 239 L K+H ++ +IS+ D V G ER +++ Sbjct: 190 VCLLPKNHRLAGKSKIKASDLRGEQYISLVHGDGSREETDRVFDREGVERNLSLEAQYSA 249 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 M L + A + ++ + P LL+ + Sbjct: 250 TCCEMVK--LGLGVTLAHPLVATDYVGQGIKVLPF--------SPSINYPNFLLYPPHGA 299 Query: 300 HNPKIVWLRETIKNLYAS 317 + +++ + Sbjct: 300 VSQLAEEFAALLRDQFER 317 >UniRef50_Q1IQA4 Transcriptional regulator, LysR family n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1IQA4_ACIBL Length = 300 Score = 213 bits (543), Expect = 9e-54, Method: Composition-based stats. Identities = 44/306 (14%), Positives = 94/306 (30%), Gaps = 22/306 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +D + L + + S ++AA++ T A+S + + L S +S T Sbjct: 1 MDFDQLETFLAVARLSSFSRAAEQRFRTQPAISAQIRAMEEEVGAKLLDRSGGRVSVTAA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + E ++ +L + +AA + +L + Q ++YP+ Sbjct: 61 GKHFLKYVEEALEARKNVLSALKEMDEVPRGEVVVAANEATCLHVLPEVFAQYKKQYPRV 120 Query: 127 TIKL-RNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + + R+ LDA+ VD G + + + + Sbjct: 121 GVNIRRSEHAKILDAVNFNAVDFGVVSLPV----------SDKRLSVVPIHREELVIMTP 170 Query: 186 KDHPALHQTWNL-DTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 HP + L +YP + +L++V +E E ++M L E Sbjct: 171 PGHPLSKRKSALIADAAQYPLLLPKLG-RTRDSLESVFEERHLEVNVSMELDSVELMKRF 229 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 A + + + A L + L++ K + Sbjct: 230 VAANLGIGFIAKSNIVED--------VKAGVLCEIAIADAHIRRELALVYRKDKVLSRAA 281 Query: 305 VWLRET 310 + Sbjct: 282 QAFIDI 287 >UniRef50_Q2LS85 Transcriptional regulator, LysR family n=1 Tax=Syntrophus aciditrophicus SB RepID=Q2LS85_SYNAS Length = 319 Score = 213 bits (543), Expect = 9e-54, Method: Composition-based stats. Identities = 45/317 (14%), Positives = 113/317 (35%), Gaps = 25/317 (7%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 + + L L L++ERS ++A++R+ +T +++K + + + L +G+S Sbjct: 12 FRNITIQQLETLVALVEERSFSRASRRVCLTQPSLTKHVKNMEEVLNVRLVNRERMGISL 71 Query: 65 TPLMVSMEQNLAEWMQMSNLL-LDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRY 123 TP + + + + Q G ++ A + +L + + + Sbjct: 72 TPEGKVLYDYARKLLHLREEAGERLVRTQDHTGGVIDMHASTIPATYILPYVLSDFRKIH 131 Query: 124 PQATIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCV 182 P + ++ +S+DAI + +IG G++ + ++ E L+ D + Sbjct: 132 PDIRVNVQMADSEESMDAILNQQSEIGIIGKKPLNQK----------LNVEPLWEDRLIL 181 Query: 183 WLRKDHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQEL----GRERTIAMSLPE 237 + + H + P + + + L++ IA+ L Sbjct: 182 AVPRGHRMAGRGMVTWAELAGEPFVVREKGSATREVFERYLRDALNWTLSRLHIAVELGS 241 Query: 238 FEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKR 297 E L ++ + L L L +P+ ++E F L++ ++ Sbjct: 242 SEAVKEAVIA--GLGISMISIHAVERELLSGL-LYEVPVE-----DCRIERSFYLIYRRQ 293 Query: 298 NSHNPKIVWLRETIKNL 314 + + +++ Sbjct: 294 LALMRHHQIFLDFVRSH 310 >UniRef50_Q1N663 Regulatory protein, LysR:LysR, substrate-binding n=1 Tax=Bermanella marisrubri RepID=Q1N663_9GAMM Length = 306 Score = 213 bits (543), Expect = 1e-53, Method: Composition-based stats. Identities = 69/313 (22%), Positives = 121/313 (38%), Gaps = 22/313 (7%) Query: 7 TLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTP 66 +DLNL + + E S+T+AA+R+N+T A+S +L++LR DDPLFV + PTP Sbjct: 2 KIDLNLFTVFEAIYLEGSLTRAAERLNLTQPAISHALSRLRERLDDPLFVRQGHKMRPTP 61 Query: 67 LMVSMEQNLAEWMQMSNLLLDKPHHQTPRGL--KFELAAESPLMMIMLNALSKQIYQRYP 124 L + ++ ++ N L + HH P + +A + +L + K + P Sbjct: 62 LAQKLIPDIQAALRQLNGALQQSHHFNPAEAEKTYRVAMRDVMEATLLPPVLKGLDNIAP 121 Query: 125 QATI-KLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVW 183 + + D + GE+D I + L +D V Sbjct: 122 NIQLASVHIERRDMESKLASGELDFVVDVLLPTSEQ----------IYKKKLLNDELVVI 171 Query: 184 LRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 L + + + +LR HI + S +D L G R +A+ + + Sbjct: 172 YNPALSQLPEGFTEEEYLRAKHILVSTRASGPSLVDYALSAEGLNRNVALRCQHYYAACQ 231 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQ-LPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 A + +LL RY Q L +LP + L WH+ + + Sbjct: 232 -VASDNGMLLTMPSRYASILLQHFPTLQRSSLPFK-------TSSIDVYLYWHESLNEDG 283 Query: 303 KIVWLRETIKNLY 315 W R+ ++ + Sbjct: 284 ANAWFRDMLQQVL 296 >UniRef50_B9ITM1 Transcriptional regulator, LysR family n=71 Tax=Bacillus RepID=B9ITM1_BACCQ Length = 297 Score = 212 bits (542), Expect = 1e-53, Method: Composition-based stats. Identities = 42/311 (13%), Positives = 92/311 (29%), Gaps = 20/311 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +++ L+ ++ + T+ AK++N S+V+ + L A PLF L T Sbjct: 1 MEIKQLITFKIAADTLNFTQTAKKLNFAQSSVTAQIKTLEAELGTPLFERLGKRLFLTEA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQAT 127 + + + +SN + A+ L ++ K+ ++PQ Sbjct: 61 GRKFQLYADKIIVLSNEAKTAVKDDEEIAGTLTIGAQESQCTYRLPSILKRFKAQFPQIK 120 Query: 128 IKLRNWDY--DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + + D+ + + G+VD+ F E + E L + V Sbjct: 121 LIFKPAHSNKDAKEQLMEGKVDLAFILDECKTEDA---------LHVEPLMKEELKVVAA 171 Query: 186 KDHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 H L QT ++ + S + + + + E Sbjct: 172 PGHHLLQQTSVSIKDLETETLLLTELGCSYRTLFEELFRIQDVYPANKIEFVSVEAIKQC 231 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 L +A P + + + + + WHK + Sbjct: 232 VIAD--LGIAVLPAIVVEKDIREGT------IKELHLENTINPIFTQIAWHKDKWMTVPL 283 Query: 305 VWLRETIKNLY 315 + + + Sbjct: 284 QQFIDVTREFF 294 >UniRef50_B5EHW2 Transcriptional regulator, LysR family n=5 Tax=Desulfuromonadales RepID=B5EHW2_GEOBB Length = 326 Score = 212 bits (542), Expect = 1e-53, Method: Composition-based stats. Identities = 42/315 (13%), Positives = 99/315 (31%), Gaps = 25/315 (7%) Query: 1 MKKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPL 60 M +DL L + + +A++ N++PSA+++++ ++ + PLF+ Sbjct: 13 MITRGQNMDLRELEVFLTVAETLHFGRASQACNLSPSALTRTIQRMEEQLEQPLFLRDNR 72 Query: 61 GLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIY 120 ++ +P ++ +Q + + A + +L L + Sbjct: 73 TVTLSPAGERLKSYARLCLQEWQSFRAAIKDEQSVAGTLSIYASITAVYSLLPELLESYR 132 Query: 121 QRYPQATIKLRNWDYDS-LDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 ++YP+ ++LR + + + GE+D+ + S +++ + + Sbjct: 133 EKYPEVQLELRTGAAEQAVTQVQNGEIDLAVAALPDRHSS---------NLEFLPIATIP 183 Query: 180 PCVWLRKDHPALHQTWNLD----TFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSL 235 + H + R P + S LD L+E I + Sbjct: 184 LIFIAPR-HAIAAD-VPQEGGELDLSRAPLVLPQTGLS-RRRLDQWLKEHRISPNITSEV 240 Query: 236 PEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWH 295 E + M + P+ + + E L Sbjct: 241 SGNEAIIAMVR--LGCGVGIVPQLVLERSPFRD------EVAVLEKAPSLKPYEVGLCCG 292 Query: 296 KRNSHNPKIVWLRET 310 +RN P + + Sbjct: 293 RRNLQRPSVKAFWQL 307 >UniRef50_A6NX65 Putative uncharacterized protein n=1 Tax=Bacteroides capillosus ATCC 29799 RepID=A6NX65_9BACE Length = 304 Score = 212 bits (542), Expect = 1e-53, Method: Composition-based stats. Identities = 34/308 (11%), Positives = 95/308 (30%), Gaps = 21/308 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 + + L + + R++++AA R+ V+ VS+++ +L + LF P L T Sbjct: 2 ITIRHLKIFLTVAETRNMSEAAARLYVSQPTVSQTIGELEKMYKARLFERYPKELFLTEA 61 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQAT 127 ++ ++ + L + + A + +L + ++ P Sbjct: 62 GRTLRAQALLAVEAFDRLDEVMKG-EGERPSLRIGATLTVGSTVLCPILDELRSVRPNVD 120 Query: 128 IKLRNWDYDSLD-AITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRK 186 + ++ + +++ + + E+D H I + SD + Sbjct: 121 LSVQVDNTRTIESKLLQNELDAAIVEGIIHRE----------EILSSPIISDCLILVCSP 170 Query: 187 DHPA-LHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMA 245 DHP ++ + P + ++ + I+ Sbjct: 171 DHPFAARKSVEPEELAAQPFVLREQGSGTRALFESFMARRRLPLNISWECSSTAAIKQAV 230 Query: 246 AQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIV 305 + L + +A ++ + + + F L +H+ + + Sbjct: 231 MRGYGLAVLSARLVSGELSRGELKRV--------NVEGCAWQRSFLLCYHRNKVISDTLR 282 Query: 306 WLRETIKN 313 + + Sbjct: 283 RFLDIAAS 290 >UniRef50_C9LQU8 Transcriptional regulator, LysR family n=2 Tax=Clostridiales RepID=C9LQU8_9FIRM Length = 304 Score = 212 bits (542), Expect = 1e-53, Method: Composition-based stats. Identities = 42/316 (13%), Positives = 95/316 (30%), Gaps = 26/316 (8%) Query: 7 TLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTP 66 L L L Q + + +T AA+ ++++ ++S ++ L PLF S + T Sbjct: 2 KLTLLALTYFQKTAELQHLTHAAEALHISQPSLSHTIKMLEQELGVPLFRRSGRNIVLTK 61 Query: 67 LMVSMEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNALSKQIYQRYPQ 125 + + M + + ++ +++ A + + +P Sbjct: 62 YGEILLSHTNRIMSELKHAQKELEDTKEAQDMTVTISIF--AASMIIPAFLTEFKKEHPH 119 Query: 126 ATIK-LRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 + ++ D ++ VD+ S + + L + + + Sbjct: 120 IRFEIIQQRDRQEINH--HSRVDLYLSSSINPIDTD----------HSITLLKEDILLAM 167 Query: 185 RKDHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 +P H + NL F + I++ + D + G + + Sbjct: 168 PDTNPLASHASVNLADFEKADFITLQQGVALRNITDFYCRAAGFTPHVILESDNPGTVRE 227 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 L ++ APR Y + LV + +L W + P Sbjct: 228 FIKA--GLGVSFAPRITWYGVGGDHVALVP-------IATPGCQRYISLSWDENTPLTPP 278 Query: 304 IVWLRETIKNLYASMA 319 L+ + A Sbjct: 279 AEELKNYFIKNFKRFA 294 >UniRef50_A9BWC5 Transcriptional regulator, LysR family n=6 Tax=Proteobacteria RepID=A9BWC5_DELAS Length = 319 Score = 212 bits (542), Expect = 1e-53, Method: Composition-based stats. Identities = 44/315 (13%), Positives = 96/315 (30%), Gaps = 27/315 (8%) Query: 9 DLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLM 68 +L L + +E +T+AA+R+ + +++ L L L P G+ PT Sbjct: 20 ELRQLRAFVAITEEGHITRAAERLGMQQPPLTRLLQGLEHELGVELVQRLPRGVRPTAAG 79 Query: 69 VSMEQNLAEWMQMSNLLLDKP-HHQTPRGLKFELAAESPLMMI-MLNALSKQIYQRYPQA 126 +++ + ++ ++L + + + S + + + + Q+ P Sbjct: 80 LALLEESKALLERCDVLAEVVRRAARGETGRLAVGFTSSAALHPFVPGVLRMFRQQVPGV 139 Query: 127 TIKLRN-WDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + L + +DA+ +D F H + + + + L Sbjct: 140 AVALEEAGTGELMDALLHERLDAAFVRSPLHGSQ---------GLQAVPILEEPMLLALP 190 Query: 186 KDHPAL---HQTWNLDTFLRYPHISICW--EQSDTWALDNVLQELGRERTIAMSLPEFEQ 240 H + L + Q A+ E G + P Sbjct: 191 AGHALARPLRRPVPLPQLASEDFVLYRRRVGQGLYDAILKACLEAGFSPRVVQEAPRMTA 250 Query: 241 SLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 +L + + L L+ P Q + + AL SQ L P L Sbjct: 251 TLSLVSA--GLGLSIVPASMQRL-RSDGIVYRAL------SQCPGLAAPLHLATRVG-DA 300 Query: 301 NPKIVWLRETIKNLY 315 + + ++ + Sbjct: 301 SAVLRRFQDLVATAA 315 >UniRef50_B9YDM1 Putative uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9YDM1_9FIRM Length = 297 Score = 212 bits (542), Expect = 1e-53, Method: Composition-based stats. Identities = 38/304 (12%), Positives = 89/304 (29%), Gaps = 25/304 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++LN L+ L Q + VT+A++++N+ ++SK++A L LF + T Sbjct: 1 MNLNQLIYFASLAQLQHVTRASEKLNIAQPSLSKAIANLEQELGVDLFEKQGRNVVLTRQ 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTP-RGLKFELAAESPLMMIMLNALSKQIYQ-RYPQ 125 + + ++ + ++ S L M+ L + Q Sbjct: 61 GKLYLDYVEKALESLEEGRSALQRMQTELDQRIDIGFVSSLQARMMPQLLADYRKTTGSQ 120 Query: 126 ATIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 L+ + G +D+ + +F V Sbjct: 121 TRFACYEGTTVTLLEQLEEGTLDLALGSEPQDSV----------RFGSDPVFRQELVVLT 170 Query: 185 RKDHPA-LHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 K + +L+ P I + ++ E G + +A E Sbjct: 171 PKTPRWQAVSSLSLEQIAAQPLILHTRNTGMRKIVLDLFDEAGLKPNVAEEATEESMIAS 230 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 + A + + + + + + K L++ + + +P Sbjct: 231 LVAMELGVAVVSLS-----------PAVQLPTVHIVKLDHPKNYRYIHLIYLRHHYLSPA 279 Query: 304 IVWL 307 + Sbjct: 280 VRHF 283 >UniRef50_Q0B7J0 Transcriptional regulator, LysR family n=1 Tax=Burkholderia ambifaria AMMD RepID=Q0B7J0_BURCM Length = 298 Score = 212 bits (542), Expect = 1e-53, Method: Composition-based stats. Identities = 40/313 (12%), Positives = 98/313 (31%), Gaps = 26/313 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L +L + + T+AAK+++V+ S +S ++ +L LF ++ Sbjct: 1 MELRHLRSFNVLAECANFTQAAKQLHVSQSTLSHTIKQLEDELKVELFDRVGKRVTLNRD 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHH-QTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 +A + + + + + + + S + +L + + P Sbjct: 61 GKQFLGTVARTLGELDSGIVSLRNCISELSGELRIGTTSTFNVRLLPGCVSEFLTQNPTV 120 Query: 127 TIKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + + S+ + + G++D+G S + +E LF++ ++ Sbjct: 121 HVTIAELPGKSIEERVRNGQLDVGICYTPSDTG----------GLWFEPLFNEELVIFAP 170 Query: 186 KDHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 +HP + + R P I E L+ + + + T + + Sbjct: 171 LNHPLAKRRRIRMVELHRQPLILPSAEVGARHILNACFRAVHAQPTPVAEINSIVPMFEL 230 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVAL-PLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 R + + A+ K LL + + Sbjct: 231 ------------SRSLRIPTIGSEFLSKAVSDFAVVRIVDPKPIRTPVLLQKQDGPQSAT 278 Query: 304 IVWLRETIKNLYA 316 + +K A Sbjct: 279 SKAFADILKRQCA 291 >UniRef50_D2B2W6 Transcriptional regulator, LysR family n=17 Tax=Bacteria RepID=D2B2W6_STRRD Length = 324 Score = 212 bits (542), Expect = 1e-53, Method: Composition-based stats. Identities = 63/310 (20%), Positives = 107/310 (34%), Gaps = 19/310 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 LDLN L L + SV AA + VTPSAVS+ LAKL L + G+ T Sbjct: 2 LDLNRLKALHAVSVYGSVGAAADALMVTPSAVSQQLAKLERETGATLLERNGRGVRLTDA 61 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + + + + + A +L + +R+P Sbjct: 62 AGLLADHAERILALVETAEADFEALRGEVVGRLSIGAFPTAARGLLPGALVHLRERHPDL 121 Query: 127 TIKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 ++L + + + + RGE+D+ + ++P + +LF D+ V L Sbjct: 122 RLQLIEREPERQVREVARGELDLAVIQDWVNRPM-----AIPDGLSRAMLFDDIADVILP 176 Query: 186 KDHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 + HP ++ L IS L L+ G E IA E+ L + Sbjct: 177 ESHPLAARSEIELAELSEDRWISSSPGTICHDWLVYTLRSAGLEPDIACMADEYPTQLAL 236 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 A A PR + + A+P+ + LW + P I Sbjct: 237 VAA--GQGCALIPRLGRDRVPSG---VRAIPI------LPRPIRKIYALWRSDAARRPAI 285 Query: 305 VWLRETIKNL 314 E ++ + Sbjct: 286 RAAVEALRTV 295 >UniRef50_UPI0001B4FA16 LysR family transcriptional regulator n=1 Tax=Streptomyces hygroscopicus ATCC 53653 RepID=UPI0001B4FA16 Length = 318 Score = 212 bits (542), Expect = 1e-53, Method: Composition-based stats. Identities = 44/294 (14%), Positives = 89/294 (30%), Gaps = 14/294 (4%) Query: 12 LLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSM 71 L + ++ S AA+R+ TPSAVS+ ++ + LF SP + PTP + + Sbjct: 7 QLQAICEVVAAGSFRSAAQRLGYTPSAVSQQISTIERALGVALFERSPRSVRPTPAGLQL 66 Query: 72 EQNLAEWMQMSNLLLDKPHH-QTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQATIKL 130 + + + D+ + L + ++ + + P+ ++ Sbjct: 67 ARRAGRLLADLSATEDEMRAYAAAERGRLRLGSFWSAGFRLVPTVLTGFLRDRPEVDVRY 126 Query: 131 RNWDYDS-LDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHP 189 D + A+ G +D+ S P +D+ ++ + V L HP Sbjct: 127 EEGDPQVTVPAVVEGRLDLAVIFEYGVVP-----HSWPDGLDHTLVREEPLYVLLPAGHP 181 Query: 190 ALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQP 248 + L IS + L ++ G + ++ + Q Sbjct: 182 LAGRRHIRLADLRDERWISYHEDTDAARCLRHICAAGGFLPEVLFRTNDYNLPYELVRQ- 240 Query: 249 DNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 L +A AP + + NP Sbjct: 241 -GLGVAIAPELAIMDTSASPDAS---GTHLVRLTDPAHTRRVY-ATRRTSDPNP 289 >UniRef50_Q1QUX6 Transcriptional regulator, LysR family n=1 Tax=Chromohalobacter salexigens DSM 3043 RepID=Q1QUX6_CHRSD Length = 313 Score = 212 bits (542), Expect = 1e-53, Method: Composition-based stats. Identities = 47/313 (15%), Positives = 106/313 (33%), Gaps = 22/313 (7%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSP-LGLS 63 + L L + + SVT+AA++++V+ ++S ++ ++ LFV GLS Sbjct: 1 MRQFTLKQLRYFVVAGELLSVTQAARKLHVSQPSISAAIQQIEDISGLQLFVRHHAQGLS 60 Query: 64 PTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQIYQR 122 TP + + ++ + L G + L A + L L ++ R Sbjct: 61 LTPSGKQLLSRTRQLLRDAEGLEKYALSLGEEIGGELRLVAFPTFAPVFLPQLLRRFADR 120 Query: 123 YPQATIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPC 181 +P ++ + D + + +G+ ++ F+ +P ID+ L+ P Sbjct: 121 HPSVSLYCDEMNQVDIVRGLGQGDYELAFTYDL----------EVPEDIDFTPLYRFPPY 170 Query: 182 VWLRKDHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQ 240 + DHP + +L+ + YP + + ++ G +A + Sbjct: 171 AVVAADHPLSERDSVSLEELVAYPMVLLD-WPLSREYFLSIFTHHGLSPIVAHRAKSMDM 229 Query: 241 SLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 + A L P L + L + + + + Sbjct: 230 MRGLVANGFGFSLFNTPLTALESLDGGGLKPLQL-------IDEARPLSMGIACLRGLRL 282 Query: 301 NPKIVWLRETIKN 313 +P + ++ Sbjct: 283 SPAAEAMHRLARD 295 >UniRef50_Q4KEU3 Transcriptional regulator, LysR family n=8 Tax=Pseudomonas RepID=Q4KEU3_PSEF5 Length = 305 Score = 212 bits (542), Expect = 1e-53, Method: Composition-based stats. Identities = 44/316 (13%), Positives = 92/316 (29%), Gaps = 25/316 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 LDL L + +E +AA R+++ +++ ++ L LF + ++ T Sbjct: 2 LDLRKLRYFLTVAEELHFGRAALRLHLAQPPLTRQISALETELGFRLFDRTSRTVTLTAQ 61 Query: 68 MVSMEQNLAEWMQMSNLL-LDKPHHQTPRGLKFELAAESPLMMI-MLNALSKQIYQRYPQ 125 ++ +L + + L S + + + + + QR+P Sbjct: 62 GRHFLPYARAVLEQVDLAQVMAGKLAAGCAGQLALGYASSIALSDLFSQAIQAFAQRFPD 121 Query: 126 ATIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 + L I G +DIG S + I L + + Sbjct: 122 VQLTLVEGASVSQWSQIVDGRIDIGMSRMQPPSEQS--------DIQSLSLGDEPLVAAI 173 Query: 185 RKDHPALHQT-WNLDTFLRYPHISICW--EQSDTWALDNVLQELGRERTIAMSLPEFEQS 241 D P Q L +P I A++ + + G S + Sbjct: 174 SSDSPLAAQAQVTLAELSEHPLILFPADYGSGLNEAIEQLYRRNGLPLRPGPSGRQITSI 233 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 + + A +A PR Q + + + +L K+ + Sbjct: 234 IALVAAGQG--IALVPRCTQTLAKKG--------VTYRPLADPSATAQLLVLTRKQG-RS 282 Query: 302 PKIVWLRETIKNLYAS 317 + + L + Sbjct: 283 QLVEAFMGVLDELLQA 298 >UniRef50_B1FZF1 Transcriptional regulator, LysR family n=1 Tax=Burkholderia graminis C4D1M RepID=B1FZF1_9BURK Length = 312 Score = 212 bits (542), Expect = 1e-53, Method: Composition-based stats. Identities = 42/306 (13%), Positives = 90/306 (29%), Gaps = 26/306 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 LDL + C E + +AA +++T +S+ + L LF + T Sbjct: 2 LDLGQVRCFVAAATELNFRRAAALLHMTQPPLSRQIQLLEDNLGVKLFERIGRTVKLTTE 61 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQT-PRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + ++ + + + L ++ L P+ Sbjct: 62 GRVFLADATRLLNLAEQAESTVRRASKGKTGRVRLGFTGAAGYELIPELLVAAADVLPEI 121 Query: 127 TIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + L ++A +D+GF + +++ ++ + V L Sbjct: 122 DVVLLELVSAAQIEAFAANAIDLGFLRPLQSRQK----------LEFLLVDEEPLIVALP 171 Query: 186 KDHPALH-QTWNLDTFLRYPHISICWEQS--DTWALDNVLQELGRERTIAMSLPEFEQSL 242 + H + L P I Q + +L G IA + + L Sbjct: 172 RRHALCQFERIELKQLDEQPFIMHSPAQGKYFHDRIMGMLAAEGVNLNIAQYIDQTPTIL 231 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 + L LA P Q ++ + + F + ++ W + P Sbjct: 232 SLVRA--GLGLAILPASAQRFHYDN--------VEFRHIAGNTIHAEMSMAWRADQDN-P 280 Query: 303 KIVWLR 308 + R Sbjct: 281 AVTAFR 286 >UniRef50_D2B6U1 DNA-binding transcriptional regulator CynR n=1 Tax=Streptosporangium roseum DSM 43021 RepID=D2B6U1_STRRD Length = 301 Score = 212 bits (542), Expect = 1e-53, Method: Composition-based stats. Identities = 33/285 (11%), Positives = 84/285 (29%), Gaps = 18/285 (6%) Query: 9 DLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLM 68 +L L L + + + T+AA+ + ++ +S+ + +L L S + T Sbjct: 4 ELRHLRYLIAVAEHGNFTRAAEDLRISQPTLSQQIKQLERAVGVQLLDRSGRSVRLTDAG 63 Query: 69 VSMEQNLAEWMQMSNLLLDKPHH-QTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQAT 127 + ++ + LAA ++ L +++ R+P T Sbjct: 64 EAYVHYARRALRDLSAAERAVFDVADLSRGSLRLAATPTFTAYLIGPLIAEMHARHPGIT 123 Query: 128 IKLRNWDYDSLD-AITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRK 186 + ++ D ++ + E+D+G + + H I LF + + + Sbjct: 124 LDVKEMTQDRIESGLLADELDLGIAFCDRHLP----------GIGGTALFMETLSLVVSA 173 Query: 187 DHPALH--QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 + + + E + +D + I + + + + Sbjct: 174 HDSDGEHLRPMPVRDLATRRLALLSGEFATRGHIDAYFRRQSVSPRIVVEANSIQALIEI 233 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVP 289 + + P + L + L L Sbjct: 234 VQRSS--VATVLPDAVTH--DHPGLSPIPLAPALPTRTVTLLRRE 274 >UniRef50_UPI0001B4E379 LysR family transcriptional regulator n=1 Tax=Streptomyces griseoflavus Tu4000 RepID=UPI0001B4E379 Length = 313 Score = 212 bits (542), Expect = 1e-53, Method: Composition-based stats. Identities = 39/307 (12%), Positives = 85/307 (27%), Gaps = 23/307 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +++ L ++ E T AA+ + SA+S S+ L LF + + T Sbjct: 1 MEIRQLRHFMAVVTEGGFTAAARSELIVQSALSTSIRNLERELGADLFDRTGRRVVLTEA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 ++ + + + + + L + L ++ + Sbjct: 61 GRALLPQARALLAGARSAREAVAAVAGLHTGRVAIGTIQTLTCVDLPGELAVFHREFSGV 120 Query: 127 TIKLRNWD-YDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + +R+ + A+ GE+D+ LP + + + + Sbjct: 121 QVSVRDATVDELTAALRAGELDLA--------YLAPDARELPEGLTVHATWHEELVLITA 172 Query: 186 KDHPALHQTWNL-DTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 HP L P + A+ + G R I + + + + Sbjct: 173 PGHPLAAAGRTLISDLAEEPFVDFRAGTGLETAVRRLAAHCGLRRRITCDVTQAGLLVEL 232 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 + +A PR L + + Q L NP Sbjct: 233 VRA--GIGVAFVPRPIGERAGLPCVTVR----------QPDPGRTVVLAGRGPRPRNPAA 280 Query: 305 VWLRETI 311 L + + Sbjct: 281 AALLDRL 287 >UniRef50_A3Y808 Transcriptional regulator, LysR family protien n=1 Tax=Marinomonas sp. MED121 RepID=A3Y808_9GAMM Length = 301 Score = 212 bits (542), Expect = 1e-53, Method: Composition-based stats. Identities = 70/315 (22%), Positives = 128/315 (40%), Gaps = 19/315 (6%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 + +DLNLL+ L + +SV+ AA + ++ SA S +A+LR F+D LFV + Sbjct: 1 MDLHQIDLNLLILFDALYRHQSVSLAADEVCISQSAFSHGIARLRKRFNDELFVRVNNQM 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPR--GLKFELAAESPLMMIMLNALSKQIY 120 PTP + Q+L + + + ++ H +F+++A +L L Q+ Sbjct: 61 QPTPRAEEIAQHLHQALPFIHNAINDSDHFDASMDKTEFKISATDYTEFSLLPKLVGQVS 120 Query: 121 QRYPQATIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 + P + + L + EVD S I++ SD Sbjct: 121 HQAPNIKLTVIGAKAPQPLTHLENNEVDFALGFSHEIEASSL--------IEHHTWLSDS 172 Query: 180 PCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFE 239 C RK+HPAL Q +LDTFL H+ + +D VL + +R +++ LP Sbjct: 173 YCTVARKNHPALTQGLDLDTFLELKHVRVSPWGEKQGIVDQVLAQHKLKRHVSLQLPSVL 232 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 + D + L + + ++ + P+ + + WHK N+ Sbjct: 233 VAPHSIIHSDLI-LTMPRIVAEQVAKQVEIEIFTPPISIPD-------YHLNIYWHKINA 284 Query: 300 HNPKIVWLRETIKNL 314 W+++ ++L Sbjct: 285 DKASFKWMKQLFQSL 299 >UniRef50_B1Y0L4 Transcriptional regulator, LysR family n=2 Tax=Burkholderiales RepID=B1Y0L4_LEPCP Length = 298 Score = 212 bits (542), Expect = 1e-53, Method: Composition-based stats. Identities = 39/310 (12%), Positives = 89/310 (28%), Gaps = 21/310 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +DL L + + + + +A +R++ T A++ S+ +L PLF + G+ T Sbjct: 1 MDLRDLRYFETIAELEHIGRATERLHRTQPALTSSVRRLEEAVGAPLFEKAGRGIRLTQA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQT-PRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + + + +L ++Q+ P+ Sbjct: 61 GKVLLKWAQRVRFDVEDARREIGDIDRGLSGHIRIGIVPTAAQFILPPAARQLMSVAPEV 120 Query: 127 TIKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 T++ D+L + GE+D+ + + L D V Sbjct: 121 TLRTVVGLIDTLKPLLHAGELDLMVATESPPEA----------GFTSQRLAEDPIVVAAS 170 Query: 186 KDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGR-ERTIAMSLPEFEQSLFM 244 HP L ++ + LD+ + + + Sbjct: 171 ATHPIFANPPTLRDLTKFRWVLQPPGAPTRDWLDHTFDRKRLPRPQVQVESTMLLMLPAL 230 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 A+ LL + + + L V L ++ + + + + P Sbjct: 231 IAET-GLLSFISRHHLGPFESRSPLKEVPL-------KETTMHRRLVVTYRETRYLLPAA 282 Query: 305 VWLRETIKNL 314 L + Sbjct: 283 RLLISFLGEA 292 >UniRef50_B2T7R4 Transcriptional regulator, LysR family n=5 Tax=Burkholderia RepID=B2T7R4_BURPP Length = 325 Score = 212 bits (541), Expect = 1e-53, Method: Composition-based stats. Identities = 55/317 (17%), Positives = 105/317 (33%), Gaps = 18/317 (5%) Query: 6 TTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPT 65 L LL L + +E +V +AA + +T A S+ L +L + LF +P G+ T Sbjct: 12 ARLKTRQLLLLAAMEEEGNVRRAADVLGMTQPAASRLLKELEDMLEVSLFDRTPHGMHAT 71 Query: 66 PLMVSMEQNLAEWMQMSNLLLDKPHHQT-PRGLKFELAAESPLMMIMLNALSKQIYQRYP 124 M ++ + + D+ + + + M+ + +RYP Sbjct: 72 LYGEVMIRHARMVLSNLSHAHDEISALRSGLAGQVRIGVIAAAAATMVPRAIASVKERYP 131 Query: 125 QATIKLRNWDYDS-LDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVW 183 Q I D L + GE+DI + + YE L + CV Sbjct: 132 QLQIWAEVETSDVMLPRLAEGELDIMIGRVLERQNQFKT------EVRYEPLADEPLCVV 185 Query: 184 LRKDHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGR-ERTIAMSLPEFEQS 241 R H ++T L + + D + ++G ++ F Sbjct: 186 ARPGHHLENETGLTLRGIVNASWVLHPPGSVLRHRFDLMFSQIGLNPPQNVVNTNNFLAI 245 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 + Q D L + + Y Q L + + LP F ++ + + + Sbjct: 246 SSLLLQSDMLAV-LPDEVARQYQQYGVLKRIPIDLPCRMD-------TFGIITRQSHLLS 297 Query: 302 PKIVWLRETIKNLYASM 318 P + E ++ + Sbjct: 298 PAASVVLEALREAAGEV 314 >UniRef50_Q2IYM8 Transcriptional regulator, LysR family n=2 Tax=Rhodopseudomonas palustris RepID=Q2IYM8_RHOP2 Length = 317 Score = 212 bits (541), Expect = 1e-53, Method: Composition-based stats. Identities = 67/316 (21%), Positives = 133/316 (42%), Gaps = 21/316 (6%) Query: 4 SITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLS 63 ++ +DLNLL+ + +++ AA+++ ++ AVS +L +LR FDDPLFV + G+ Sbjct: 5 NLRNVDLNLLIVFDAVYATGNISHAARQLALSQPAVSNALTRLREHFDDPLFVRAGRGVK 64 Query: 64 PTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQIYQ 121 PT M + + E +++ D F + PL +++ + ++I Sbjct: 65 PTLRSQQMIEPVREALRLIRQQFDGDRSLDLGSYKRTFRIVIVDPLEAMLMPTMLREISA 124 Query: 122 RYPQATIKLR-NWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 PQ TI+ R W+ + DAI G +D+ + ++ + Sbjct: 125 HAPQVTIESRPPWNTNVADAIIAGTLDLA----------CYTFPVSAPGLVFKTICPCDH 174 Query: 181 CVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQ 240 + R+ HP + T + +TFL +++ E +D + G R IA + + Sbjct: 175 VIVARRGHPKIGATLDAETFLSLAQVALIPELRGHTNIDRDITTRGGNRRIAYMVNKVWS 234 Query: 241 SLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 + D + + R+ + L + P+P + ++WH++N+ Sbjct: 235 MPGVVGSTDLVTV-MPRRFAELMAPKFGLQIFESPIPISPQ-------DYHMIWHEKNTD 286 Query: 301 NPKIVWLRETIKNLYA 316 +P WLR+T+ Sbjct: 287 DPGHKWLRDTMVKAMQ 302 >UniRef50_B8KV86 Putative transcriptional regulator, LysR family n=1 Tax=gamma proteobacterium NOR51-B RepID=B8KV86_9GAMM Length = 302 Score = 212 bits (541), Expect = 1e-53, Method: Composition-based stats. Identities = 60/317 (18%), Positives = 135/317 (42%), Gaps = 21/317 (6%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 ++ ++DLNLL ++ E ++T AA +I ++ A+S +L +LR DD LFV++ G+ Sbjct: 1 MNLRSVDLNLLTIFDAIVSEGNLTHAADKIGMSQPAISAALGRLRVTLDDELFVSTGRGV 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQIY 120 PT + +++ + ++ L P F +++ ++++ L + + Sbjct: 61 KPTQRALQLQEPVRRILEDVRAALTSTGEFDPESSDRVFTISSIDYGGIVVIPRLLRYLQ 120 Query: 121 QRYPQATIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 ++ + + ++ + R D+ + L + ++L ++ Sbjct: 121 KQQSPIIVNINPSQTGEAHRDVDRSSGDLTITSDP----------LLSPDHECKLLRREL 170 Query: 180 PCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFE 239 P RKDHP + + +++ F R H+ + + ALD L +LG R +P F Sbjct: 171 PYCLARKDHPDITGSLSVEQFQRNRHVLLYSNNTRGLALDAHLLQLGFNRECGARVPSFF 230 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 ++ D + + + + + L ++A P + ++WH+ + Sbjct: 231 NMPYIVGNTDMI-CTMPRQMAEDFARQFGLQVLAAPFD-------NWTASYFMVWHRSFN 282 Query: 300 HNPKIVWLRETIKNLYA 316 + WLR++I L + Sbjct: 283 GDSGHCWLRDSIFRLCS 299 >UniRef50_Q01QD7 Transcriptional regulator, LysR family n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q01QD7_SOLUE Length = 314 Score = 212 bits (541), Expect = 2e-53, Method: Composition-based stats. Identities = 39/317 (12%), Positives = 106/317 (33%), Gaps = 24/317 (7%) Query: 1 MKKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPL 60 M + I+ ++L+ L + + S +A +R++++P A+ + +L + L+ + Sbjct: 1 MPREIS-VELSHSRALVAVGELGSFNRAGERLHLSPPAIFAQIHQLEGEVGEKLYERTGR 59 Query: 61 GLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTP-RGLKFELAAESPLMMIMLNALSKQI 119 L+ TP + + + + + + + + L + + ++ L ++ Sbjct: 60 KLTLTPAGRLLIEYCRRLLVLHDEAVGAVRELSGVQRGSLHLGCGPHISVSIVPHLLRKF 119 Query: 120 YQRYPQATIKLRNWD-YDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSD 178 +P ++L + DA+ G+VD+ ++ + L+ Sbjct: 120 LSLHPNVEVRLITGNDASLFDALHGGKVDLILMNLPVE----------DTNLEQDPLWRY 169 Query: 179 VPCVWLRKDHPALHQTW-NLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPE 237 + + PA + + I A+ +G E + M + Sbjct: 170 ELVFVVPPNDPAADRKVISAPELATRRFILYQRTVVIETAIREFCVSVGFEPNVVMQNDQ 229 Query: 238 FEQSLFMAAQPDNLLLATAP-RYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHK 296 + + L ++ P + L ++ L ++L +L+ K Sbjct: 230 ADSIKELVK--LGLGISLLPLWSVSEEARRGSLCILRL-------ANRQLFSVTGVLYRK 280 Query: 297 RNSHNPKIVWLRETIKN 313 + L ++ Sbjct: 281 SAYLPTAVRALLGVAQD 297 >UniRef50_Q8TVB0 Transcriptional regulator of the LysR family n=1 Tax=Methanopyrus kandleri RepID=Q8TVB0_METKA Length = 304 Score = 212 bits (541), Expect = 2e-53, Method: Composition-based stats. Identities = 43/311 (13%), Positives = 104/311 (33%), Gaps = 25/311 (8%) Query: 14 LCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSMEQ 73 + +++++S +KAA+ + +T VS +A L +FD LFV +P G+ T + Sbjct: 10 RTFREVVRQKSFSKAAEALGITQGTVSNQIASLERFFDARLFVRTPEGVELTEEGEIALE 69 Query: 74 NLAEWMQMSNLLLDKPHHQT-PRGLKFELAAESPLMMIMLNALSKQIYQRYPQATIKLRN 132 + + DK + K ++ + +L K+ YP+ + +R Sbjct: 70 AIETVLDAVERAKDKIAAVSKEPSGKVRVSTSTVPGGYLLPGSVKEFRSEYPKVDVIIRV 129 Query: 133 -WDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPAL 191 ++ + + G+ D+ G + +++ + S+ V L DH Sbjct: 130 CDSREATEHVLSGDADVAIVGTD--------AFVTRKSVEVVPIASEELVVILPPDHELA 181 Query: 192 HQ-TWNLDTFLRYPHISICWEQSDTWALDNVLQELGR---ERTIAMSLPEFEQSLFMAAQ 247 ++D + P+++ ++ L+ G + I + E + +Q Sbjct: 182 DAMEVSIDDIVGEPYVNRESGSGTRREVEKYLKSHGLGFEDFKIVEEVGSTEAVITSVSQ 241 Query: 248 PDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP-KIVW 306 ++ + L ++ + F + Sbjct: 242 --GAGISIISERAAKRAESAGL--------IRIARLEDRPRRFFYALKSDKPLHASATEA 291 Query: 307 LRETIKNLYAS 317 E + + + Sbjct: 292 FWEFLLSEFRG 302 >UniRef50_A1BA87 Transcriptional regulator, LysR family n=1 Tax=Paracoccus denitrificans PD1222 RepID=A1BA87_PARDP Length = 300 Score = 212 bits (541), Expect = 2e-53, Method: Composition-based stats. Identities = 38/312 (12%), Positives = 96/312 (30%), Gaps = 25/312 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 + + L C +L +E + T+AA+R+N++ +S + L L + ++ T Sbjct: 1 MRMRQLRCFVVLAEELNFTRAARRLNMSQPPLSTQIQTLEREVGAELISRTSRKVALTRA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + L + E+ A ++ L+ L + +P+ Sbjct: 61 GELFLPRARNMLDQYERSLQEIREIQQGQDGLLEIGATGSILRGGLSELLAHFARLHPRI 120 Query: 127 TIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 T+++ + + D+ F+ + +E + + +R Sbjct: 121 TLRVHEQTPAAQITEVLSRRTDVSFNRSVPR----------DEELAHEYGWREEMVALVR 170 Query: 186 KDHPALHQT-WNLDTFLRYPHISICWEQS-DTWALDNVLQELGRERTIAMSLPEFEQSLF 243 DH +T ++D H+ + + S + + G ++ + + + Sbjct: 171 SDHRLAGRTCVSIDDLREDQHVVLRPDSSDFAAYVMACIVAAGYRPRVSQQVVDAQSIPS 230 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 + ++ P PL F + +++H P Sbjct: 231 LIVA--GFGVSIVPAGIARLTAG--------PLTFLPIRPNPPVSEVFIVYH-HRDPAPA 279 Query: 304 IVWLRETIKNLY 315 + I+ Sbjct: 280 LQLFLAEIRRSL 291 >UniRef50_Q13GF1 Transcriptional regulator, LysR family n=1 Tax=Burkholderia xenovorans LB400 RepID=Q13GF1_BURXL Length = 334 Score = 212 bits (541), Expect = 2e-53, Method: Composition-based stats. Identities = 55/311 (17%), Positives = 108/311 (34%), Gaps = 24/311 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 + LN+L + + SV KAA+ I++TPSAVS+ +A L PLF G+ TP Sbjct: 1 MQLNVLRYFLEVSRHGSVRKAAEHIHITPSAVSRHIAILEGMIGAPLFERRSRGMVLTPE 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + + +++ + A + +L + ++ Sbjct: 61 GEILFKYADRIIGNLDIVKCAVGEIRGMKKGILRIFAIEAVASSILYPAIRDFIVKHSGV 120 Query: 127 TIKLRNWDY---DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVW 183 TI++ D + A+ R E D+G R + + L F Sbjct: 121 TIQVDVVGRDNNDVVHALVRDEADLGIMFRLNRNAEIDYLDE----------FDMPFVAL 170 Query: 184 LRKDHPALHQ-TWNLDTFLRYPHI-SICWEQSDTWALDNVLQELGRERTIAMSLPEFEQS 241 HP + + ++ + + + D+V++ LG + +++ E + Sbjct: 171 AAPGHPLAARSSISVRDLAD-TLVGGLPPSSASRSITDDVMRSLGTQIRYTLTVNSMEMA 229 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 A + +A P C LVA+P + V T+ H+ + Sbjct: 230 KEFART--GVGIAILPSVCAQEECKTG-ALVAVPF----IEWGLQTVRATVCGHRGREPS 282 Query: 302 PKIVWLRETIK 312 + +K Sbjct: 283 AAAKAFLDILK 293 >UniRef50_Q7D0H0 Transcriptional regulator, LysR family n=12 Tax=Rhizobium/Agrobacterium group RepID=Q7D0H0_AGRT5 Length = 295 Score = 212 bits (541), Expect = 2e-53, Method: Composition-based stats. Identities = 47/310 (15%), Positives = 86/310 (27%), Gaps = 24/310 (7%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 + LDL + + S + AA + +T AVS + L L P Sbjct: 1 MIDLDLRQMRSFMDVADLGSFSAAADKAGLTQPAVSLHIRLLEKQLGVRLIERVGRRAQP 60 Query: 65 TPLMVSMEQNLAEWMQMSNLLLDKPH-HQTPRGLKFELAAESPLMMIMLNALSKQIYQRY 123 T + + ++ H++ + + + +L + +I Q Sbjct: 61 TAAGRDFLIHARRISEEVAHAIETVAPHRSGATGSLRIGTGATACIYLLPPVLGRIRQAM 120 Query: 124 PQATIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCV 182 P I ++ +D L + +D + RS +D + D Sbjct: 121 PGIDIVVQTGNTHDILRLLEANTIDAAVVALPASGRS----------LDIRDIHLDELVA 170 Query: 183 WLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 + T +T + + +D GR AM L E Sbjct: 171 VFPRGAVPARTTLTAETLSTRSLLLYE-GGNTRKLVDQWFSASGRTVQPAMELGSVEAIK 229 Query: 243 FMAAQPDNLLLATAPRYCQYYN-QLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 + L LA PR + L +L + LE L + Sbjct: 230 KL--AGAGLGLAVVPRMAVEHEGAASGLEWRSL--------EPPLERRIALAMRRDKHMT 279 Query: 302 PKIVWLRETI 311 + L + Sbjct: 280 APLRALAGAL 289 >UniRef50_C7JHS5 Transcriptional regulator LysR n=7 Tax=Acetobacter pasteurianus RepID=C7JHS5_ACEP3 Length = 302 Score = 211 bits (540), Expect = 2e-53, Method: Composition-based stats. Identities = 35/285 (12%), Positives = 76/285 (26%), Gaps = 18/285 (6%) Query: 10 LNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMV 69 L + C + +E +AA R+N+T +S+ + L L + + T Sbjct: 4 LTQVRCFVAVAEELHFGRAAARLNMTQPPLSRQIQLLEHSLGVELLERTSRVVRLTQAGS 63 Query: 70 SMEQNLAEWMQMSNLLLDKPHHQ-TPRGLKFELAAESPLMMIMLNALSKQIYQRYPQATI 128 + ++ + + + L L + YP + Sbjct: 64 VFLKEGRRLLRNAEDAALATRRAGRGALGQIAIGFTPGCSYDFLPRLIAALRHHYPDVEL 123 Query: 129 KLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKD 187 L D L A+ +D+GF I+ + + + +D Sbjct: 124 MLEEMITRDQLSALASRRIDVGFIRPHFDAP----------DIERRRIIKEPMLAAIPED 173 Query: 188 HPAL-HQTWNLDTFLRYPHISICW--EQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 HP I + +L G + + L + + + Sbjct: 174 HPLALLDVIMPSDLEGQEMIMYSVLGGGYFHDLVHRLLISSGIQPKLIHHLTQINAVMSL 233 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVP 289 + +A P+ ++ L D + + Sbjct: 234 VKT--GMGVALVPQSASRLGIS-RVVYRELGFVKDIFAELFMAFR 275 >UniRef50_A8LT79 Transcriptional regulator n=1 Tax=Dinoroseobacter shibae DFL 12 RepID=A8LT79_DINSH Length = 304 Score = 211 bits (540), Expect = 2e-53, Method: Composition-based stats. Identities = 46/309 (14%), Positives = 97/309 (31%), Gaps = 22/309 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L + L + +E S+T A++R+NV A+S+ L KL A PLF +P G+ PT Sbjct: 1 MELRQMQYLLAIYEEGSLTGASRRLNVVQPALSQQLQKLEAEIGQPLFTRAPKGMIPTQA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPH-HQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + ++ + + L+ P + S L ++ +YP Sbjct: 61 GIEAYEHFVRITRDLDTALNALSGDGGPVRGTVSIGVVSSAANNALGETLQKFTVKYPDV 120 Query: 127 TIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 ++K+ + D + +D+ + ++ + + C+ Sbjct: 121 SVKVTGGYTGELQDQLRMSRIDLAIINMPPLKQDPRIVD----------IVKEDFCLIAA 170 Query: 186 KDHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 D P + L+ + +D G + +M E + Sbjct: 171 PDTPITGKAGLRLEDIETMKLVIPSQRHGLRTIIDRAANGEGLALSPSMEFDEMKLIEDF 230 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 D + P L A P+ + + + + Sbjct: 231 VCATDY--VTILPPIAVNRALRSG-RLKAYPI------RPAISRRLVYQINPSRPLSAAA 281 Query: 305 VWLRETIKN 313 L + I+ Sbjct: 282 QILIDEIRE 290 >UniRef50_B9JKI4 Hydrogen peroxide sensing transcriptional regulator protein n=10 Tax=Alphaproteobacteria RepID=B9JKI4_AGRRK Length = 325 Score = 211 bits (540), Expect = 2e-53, Method: Composition-based stats. Identities = 36/320 (11%), Positives = 86/320 (26%), Gaps = 29/320 (9%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 +T L L + L ++ +AA ++ A+S + +L LF + Sbjct: 1 MTNLTLKQFRYFEALARQGHFGRAADVCAISQPALSMQIKELEETLGTELFERGARQVRL 60 Query: 65 TPLMVSMEQNLAEWMQMSNLLLDKPHH-QTPRGLKFELAAESPLMMIMLNALSKQIYQRY 123 T + + E ++ + L D Q + + + +L A+ + + + Sbjct: 61 TSFGEAFALRVREILRSVDELGDLARASQDRLVGRLRIGIIPTVAPYLLPAIIGNLTRMH 120 Query: 124 PQATIKLRN-WDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCV 182 I +R + + G +D S + LFS+ + Sbjct: 121 DGLEIHVRETLTSKLVQELAEGRLDTAIVALPVSEPS----------LTEVSLFSENFVL 170 Query: 183 WLRKDHPALHQTWN-LDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQS 241 + + + + + + M Sbjct: 171 VRPGEDE--GKPVPNREALREMRLLLLEEGHCFRDQALSFCNIQSALPRELMDGSSLSTL 228 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 + M + + + P + + + Q + ++W K N Sbjct: 229 VQMVSA--GIGVTLIPEMAV------GVETRSASVSVARFQNVQPSRTIGMIWRKTN--- 277 Query: 302 PKIVWLR---ETIKNLYASM 318 P E ++ +M Sbjct: 278 PLAKQFLQISEVVRQSADAM 297 >UniRef50_D1YDW7 LysR substrate binding domain protein n=3 Tax=Propionibacterium acnes RepID=D1YDW7_PROAC Length = 314 Score = 211 bits (540), Expect = 2e-53, Method: Composition-based stats. Identities = 38/311 (12%), Positives = 83/311 (26%), Gaps = 21/311 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L+ L L +E +AA V+ +S + +L L V + TP+ Sbjct: 1 MNLHDLRYFVALAEEHHFGRAAASCGVSQPTLSTQIHRLENELGVVLAVRVGRRIEITPV 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPH-HQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + Q + + +S+ + L+ + L +L + + Q P Sbjct: 61 GERIAQAARDMLVLSDDIRTMAREEADRMTLQLRVGVFPTLGPFVLPQVIARCDQHDPGV 120 Query: 127 TIKLRN-WDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 I + + L+AI G++D+ ++ +F + + Sbjct: 121 NIHIVEKRTAELLEAIRNGQLDVAAVAAPV----------SDDSLVTIPVFREEFLLVTG 170 Query: 186 KDHPALHQ--TWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 D + + I + + V ++ E Sbjct: 171 ADDELAREEGPIDPHDVPTEGLILMSEGHCLRDQVLEVCSPSHPLPPATLTAGSLETLRE 230 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 + PR +V + H P Sbjct: 231 LV--SVGAGRTLMPRSAISAPLHADPRIVVREFTHPR-----PHRDIVVAGRPATMHRPA 283 Query: 304 IVWLRETIKNL 314 + L ++ L Sbjct: 284 VQTLTTILRQL 294 >UniRef50_C0Z529 Transcriptional regulator n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0Z529_BREBN Length = 297 Score = 211 bits (540), Expect = 2e-53, Method: Composition-based stats. Identities = 45/315 (14%), Positives = 97/315 (30%), Gaps = 31/315 (9%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L+ L + SVT+AA ++++ AVS + KL D L + G+S T Sbjct: 1 MNLHALRIFVEVASRGSVTEAAFALSISQPAVSAQIRKLENDLDMTLLIPDGRGISLTYE 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQ-TPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + + + + + +++ ++ Q + Y Sbjct: 61 GRFLFEKARRIYDWEREIESQLTEIKQGKKGRLRISSTYLPSHYLVPQWLAQYKREYEGV 120 Query: 127 TIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 +++R + S++ + EVD+ +ES I L L Sbjct: 121 DVEIRTRNSMQSIELLLSCEVDVAIIIKESWDELP---------ITRIHLTDVSYWFILP 171 Query: 186 KDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGR-ERTIAMS----LPEFEQ 240 HP + ++ + P + S L + +E G + M + Sbjct: 172 AHHPLAGKEIRMEQLVEEPFLLREQGSSTRDWLFALCREHGVKRPQVGMQYHGLVESIHS 231 Query: 241 SLFMAAQPDNLLLATAPRYCQY-YNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKR-N 298 AP + ++ V +P +++ P + Sbjct: 232 VRA------GYGTMLAPALAVREMVERGEVGRVTVP-------GVEIKRPLYVCTRDDET 278 Query: 299 SHNPKIVWLRETIKN 313 P + E +K Sbjct: 279 DQRPVVAQFLEMVKR 293 >UniRef50_A9AUC8 Transcriptional regulator, LysR family n=2 Tax=Chloroflexi (class) RepID=A9AUC8_HERA2 Length = 300 Score = 211 bits (540), Expect = 2e-53, Method: Composition-based stats. Identities = 38/308 (12%), Positives = 85/308 (27%), Gaps = 21/308 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 LDL L Q R+ T+AA+++++T VS+ + L LF G+ T Sbjct: 2 LDLQKLRMFVAAAQSRNFTRAAEQLDLTQPTVSQQIQTLERELGVSLFERLSRGIELTAA 61 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTP-RGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 ++ + + + + + L + L L L ++ +P Sbjct: 62 GRALLPHAEQMIALERIAEQAVRAAAGQSERTLLLGVGNTLATYALPDLLQRFNWEHPAF 121 Query: 127 TIKL-RNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + + L + GE ++ G + + + V + Sbjct: 122 VVHIGTGNTEQLLAQVISGEFELALVGSPI----------VHTQLIIMPFLTTELVVIVS 171 Query: 186 KDHPALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 D P + N++ + + ++ +L + L E Sbjct: 172 PDDPWARLKQINIEALHGRRMLLREEGSALQASVSELLNAQQIRPKQPIVLGNLEAIKRS 231 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 L +A P L + ++ H+ Sbjct: 232 VE--VGLGIALVPAMAVRREVAAG------RLRQIHLANVPTRRVYNVVHHRDRHITNAA 283 Query: 305 VWLRETIK 312 + ++ Sbjct: 284 QLFLDLLR 291 >UniRef50_A7IQF8 Transcriptional regulator, LysR family n=12 Tax=Bacteria RepID=A7IQF8_XANP2 Length = 375 Score = 211 bits (540), Expect = 2e-53, Method: Composition-based stats. Identities = 37/303 (12%), Positives = 93/303 (30%), Gaps = 26/303 (8%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 K I +D L + +E + +AA R+N+ +S+ +A+L LF S + Sbjct: 56 KDIGGMDFKRLGYFLAVAEELNFGRAAARLNIAQPPLSRQIAQLEQDLGADLFDRSRSQI 115 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQ-TPRGLKFELAAESPLMMIMLNALSKQIYQ 121 T M + E + ++ + R + +A E +L + + Sbjct: 116 RLTQAGELMLERTREILALAERTEQEVRRVGEGRAGRLRIAFEGTATYGVLPKIIQAYRT 175 Query: 122 RYPQATIKLRNWD-YDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 +P + L + A+ + E+DI + + + E++ + Sbjct: 176 AHPDVELALCTMSHAELKRALIQREIDIAVARPKLD----------DAELKSEIIAQEEL 225 Query: 181 CVWLRKDHPALHQTWNLDTFLRYPHISIC--WEQSDTWALDNVLQELGRERTIAMSLPEF 238 + L L + + +V ++ G + ++ Sbjct: 226 ILALPDKGE--GSILRLSDLKAETFVLYPRQPRPGFCDLVLDVCRQEGFTPEDQVFTQDY 283 Query: 239 EQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRN 298 + ++ + ++ P ++ + F + +L + + N Sbjct: 284 QTAITLI--SIGTGISLVPASVAESSRAG--------VRFARYEGFNPGTELSLNYRRDN 333 Query: 299 SHN 301 Sbjct: 334 QMP 336 >UniRef50_A3NGA2 Transcriptional regulator n=70 Tax=Proteobacteria RepID=A3NGA2_BURP6 Length = 339 Score = 211 bits (540), Expect = 2e-53, Method: Composition-based stats. Identities = 46/310 (14%), Positives = 106/310 (34%), Gaps = 19/310 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 L L L + +++AA ++ ++ SAV+ ++ +L LFV + G++ T Sbjct: 38 LTLRQLKYFVATAELGQISQAAIQLTISQSAVTSAIRELEDSLGTQLFVRTASGVALTNT 97 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQAT 127 + + + P+ ++ LAA ++ L +++ +YP+ T Sbjct: 98 GRRFLNQAYTILSSVDEAMRIPNLESTLTGTLALAASYTVLGYFLPHHLMRLHTQYPRLT 157 Query: 128 IKLRNWDYDSLDA-ITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRK 186 I+L + +S++ + G D+ + + E + +W+ Sbjct: 158 IQLHELNRESIEEGLIAGRYDMAVL---------LTSNVSNPELVLEPVIHSARRLWVGA 208 Query: 187 DHPALHQ-TWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMA 245 HP L + + P + + +++ AL E + + E M Sbjct: 209 HHPLLRRESVTFADVAPEPFVMLTVDEAAYTAL-RYWNETPYRPNVILRTSSVEAVRSMV 267 Query: 246 AQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIV 305 A +A L + + + L W + +P + Sbjct: 268 ANGSG--VAILSDMVYRPWSLEGRRI-----ETVLLRDPVPPMSVGLAWRRNAEFSPAMH 320 Query: 306 WLRETIKNLY 315 +RE ++ + Sbjct: 321 AVREYFRHTF 330 >UniRef50_B1M0B1 Transcriptional regulator, LysR family n=24 Tax=Proteobacteria RepID=B1M0B1_METRJ Length = 308 Score = 211 bits (540), Expect = 2e-53, Method: Composition-based stats. Identities = 50/316 (15%), Positives = 97/316 (30%), Gaps = 22/316 (6%) Query: 7 TLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTP 66 L+L + ++Q S T+AA +N++ A++ + +L D L + ++PT Sbjct: 2 DLNLRQVRAFVSVVQAGSFTRAAALLNLSQPALTVQIRRLEETLDARLLDRTSRTVAPTR 61 Query: 67 LMVSMEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNALSKQIYQRYPQ 125 L + ++ + ++ R +A +L+ + +P Sbjct: 62 LGRDLLPVFQRVLRDLDAVVVDTRDLAARRHGVVRVATLPSFAASVLSDAIVRFRAEHPA 121 Query: 126 ATIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 T ++++ LD + E D+G G + +L D V Sbjct: 122 VTFRIKDVIAQRVLDLVRGEEADLGIVGGDVRDPEIGVLHRT----------RDALHVIY 171 Query: 185 RKDHPA-LHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 DHP + +P I + S +D GR +A ++ Sbjct: 172 PADHPIGALPRVTIAALAEHPLILMDPATSVRAVVDRAFIGSGRLPRVACEATYMMTAVS 231 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 M L L P + L A+ E P L+ + P Sbjct: 232 MVRA--GLGLTILPGAAREIRAEPLLRSRAID-------DPLFERPVCLIKKAGRTMPPA 282 Query: 304 IVWLRETIKNLYASMA 319 + + A Sbjct: 283 AEAFCRMVADRLADPG 298 >UniRef50_C6DI39 Transcriptional regulator, LysR family n=1 Tax=Pectobacterium carotovorum subsp. carotovorum PC1 RepID=C6DI39_PECCP Length = 308 Score = 211 bits (540), Expect = 2e-53, Method: Composition-based stats. Identities = 41/319 (12%), Positives = 95/319 (29%), Gaps = 30/319 (9%) Query: 5 ITTLDLN---LLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLG 61 ++ +D L + +E +AA R+ ++ +++ + L LF S G Sbjct: 1 MSKIDYRLIKQLYLFLAVAEEEHFGRAAARLGMSQPPLTEQIKILEQSLKLTLFERSRRG 60 Query: 62 LSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNALSKQIY 120 + +P ++ + ++ L + A + M ++ Sbjct: 61 TTLSPAGKAILPQVKRFVDHMASLEKMVKEVAQGKVGVIHIGAITSAMFDVVPEFLNYFK 120 Query: 121 QRYPQATIKLRN-WDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 YP T+ + +++ ++ G++D+ F E + L D+ Sbjct: 121 HHYPDVTVFVNEIDSAEAISSLLSGKLDMAFVRVEGDIGQT---------LKSIPLTEDL 171 Query: 180 PCVWLRKDHPAL-HQTWNLDTFLRYPHISICWE--QSDTWALDNVLQELGRERTIAMSLP 236 V L +HP + L + + L + +E G I + Sbjct: 172 LGVALPVEHPMSCNNEIRLGDLKDEAFVMSSRRVNPTYFDILTSACRENGFNPRILYEVR 231 Query: 237 EFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHK 296 + + L + + ++ V L+W+ Sbjct: 232 SVTAQIAYVSCGQGAALVPLSMS----------RFIPGNVRLIPLKESIKIVTAALVWNP 281 Query: 297 RNSHNPK---IVWLRETIK 312 N H + WL + + Sbjct: 282 GNGHPLVEYGVKWLTQYVA 300 >UniRef50_C5CMN8 Transcriptional regulator, LysR family n=1 Tax=Variovorax paradoxus S110 RepID=C5CMN8_VARPS Length = 302 Score = 211 bits (540), Expect = 2e-53, Method: Composition-based stats. Identities = 36/314 (11%), Positives = 92/314 (29%), Gaps = 23/314 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++ L ++ +E + +AA++++++ +S ++ L L S + TP Sbjct: 2 IEFRQLRQFVVVAEELNFGRAAEKLHMSQPPLSVAIRNLELQVGTLLIDRSRHHVRLTPA 61 Query: 68 MVSMEQNLAEWMQM-SNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 ++ + L+ + +L + K+ + YP Sbjct: 62 GKVFLKDAQRLLTQAHAATERARRAAQGAEGSLSLSFVPSAALDLLPDIFKRFQRDYPTV 121 Query: 127 TIKLR-NWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + + ++A+ R EVD+ + + L + + + Sbjct: 122 HLHVTAETTTRQVEALRRAEVDLALVVGPLQDV---------PDLAFVDLQAQGFVIAVP 172 Query: 186 KDHPAL-HQTWNLDTFLRYPHISICW--EQSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 + H ++ + I+ AL + + G + + + L Sbjct: 173 RSHALAKQRSVKIKALAAESFIAFPAAEGAGFVAALLSACKAAGFSPRVVQEASQMQAVL 232 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 + A L +A P + L + + + + + N + P Sbjct: 233 TLVAG--GLGIALVPASMRM------LAMKDVAFLDVAETRAPPTYQLAFAYSRTNDN-P 283 Query: 303 KIVWLRETIKNLYA 316 I A Sbjct: 284 VIHSFLAVAGKAVA 297 >UniRef50_Q0K3Z3 Transcriptional regulator, LysR-family n=1 Tax=Ralstonia eutropha H16 RepID=Q0K3Z3_RALEH Length = 297 Score = 211 bits (540), Expect = 2e-53, Method: Composition-based stats. Identities = 50/312 (16%), Positives = 106/312 (33%), Gaps = 21/312 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 + + L L L + R+V++ A R+N+T A+S+ LA+L + LF GL PT Sbjct: 1 MRIRQLHVLVALHETRNVSRTAARLNMTQPALSRWLAELESELGVALFERHSRGLVPTRF 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQT-PRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 ++ + + + + A + + +L + + +R+P A Sbjct: 61 CEALVVHARTILNEIERTQATIRVMAEGAAGQLAIGATPTVSVDLLPSAISRFRERFPDA 120 Query: 127 TIKLRNWD-YDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + L D L A+ G +D E + + ++L+ + V Sbjct: 121 HLTLAEGTVEDMLPALREGRLDFVMGRTEVQG--------IDGELRCDLLYPETIRVIAG 172 Query: 186 KDHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELG-RERTIAMSLPEFEQSLF 243 HP + Y + LD L G + + ++ Sbjct: 173 PTHPLARKRKVGWADTRAYTWVGPPVTSQIRRELDYELALAGEPAPCVRIESATLLANVS 232 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 + Q + L + + R ++++L Q+ ++ LP + +L + P Sbjct: 233 LLQQGELLAV-MSGRMAAFFSRLGQVAILRLPYRREGM--------VGVLRRRDTEQTPL 283 Query: 304 IVWLRETIKNLY 315 + + Sbjct: 284 RQAFMDALAASA 295 >UniRef50_Q2BJ61 Transcriptional regulator, LysR family protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BJ61_9GAMM Length = 302 Score = 211 bits (540), Expect = 2e-53, Method: Composition-based stats. Identities = 61/315 (19%), Positives = 126/315 (40%), Gaps = 15/315 (4%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 ++ ++DLNLL+ LQ L+ E+ V+KAA+R+N++ AVS++L +LR DP+ V + G Sbjct: 1 MNLRSVDLNLLVVLQALIDEQHVSKAAERLNMSQPAVSRALQRLRTTLQDPILVRTGSGY 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLD-KPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQ 121 + V + + L+ + ++ + +L +++++ + + + + Sbjct: 61 DLSARAVVLREQLSHVLHEVQAIMQPEQFDPMQAEGVLKLTGLDLELILLMPDVIRMLRE 120 Query: 122 RYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPC 181 + P +++ + + + RG+V +G + Sbjct: 121 KAPNLRVEVVPQLPEHFELLERGDVHFTITGLFPQT--------HHDQYRRIEIARTGHV 172 Query: 182 VWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQS 241 + +D+P +L + H + +D+ L E G +R + + L F Sbjct: 173 CVMDRDNPLAKGELSLQDYANASHGLVSITGKGPGMMDDALGEFGYKRKVMLRLANFMSV 232 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 Q D + + Q L L LP F EV + WH R H+ Sbjct: 233 AQFCQQSDLI-FTLPKIMATHLAQGTSLVLRPLPKEF-----ALPEVVLYMYWHDRYHHD 286 Query: 302 PKIVWLRETIKNLYA 316 P W+R + +++ Sbjct: 287 PMCSWVRAELAEIFS 301 >UniRef50_B5JHH8 LysR substrate binding domain protein n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JHH8_9BACT Length = 296 Score = 211 bits (540), Expect = 2e-53, Method: Composition-based stats. Identities = 42/314 (13%), Positives = 93/314 (29%), Gaps = 24/314 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L + + R+ T+AA+ NV+ A+S + KL A PLF ++ T Sbjct: 1 MELQQLRYFSSVAKLRNFTRAAEECNVSQPALSIQIKKLEAELGGPLFHRQGRTIALTQA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQR-YPQA 126 +E + M LD+ G + A + ++ + + P Sbjct: 61 GERLEGKAEALLLMHQSTLDELKDTVTEGGEAHFGATLTIAPYLIPYVVSHAGKEGMPA- 119 Query: 127 TIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 +++ L I G +D + +V+ + + +R Sbjct: 120 -FRMQENFTEGLLSGILDGSLDFAIMSTPVEVPK----------LLVKVIAREPFVLVMR 168 Query: 186 KDHPALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 DH + P + + + ++ + + L + Sbjct: 169 SDHRLARKRRILAADVRAEPFLPLSHIHCAGRQISEFYKQGPGRSKPVFESAQIDTILKL 228 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 AQ ++ P+ + L + + L +++ H + Sbjct: 229 VAQGQG--VSLLPKMAVMDSLESVLCYRVV-------EGNDLGRDISMVHHPDRYLSVAA 279 Query: 305 VWLRETIKNLYASM 318 L I+ Sbjct: 280 RGLMALIERSLNDF 293 >UniRef50_Q67TA2 LysR family transcriptional regulator n=1 Tax=Symbiobacterium thermophilum RepID=Q67TA2_SYMTH Length = 303 Score = 211 bits (540), Expect = 2e-53, Method: Composition-based stats. Identities = 57/310 (18%), Positives = 106/310 (34%), Gaps = 23/310 (7%) Query: 11 NLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVS 70 N L + + S+++AA ++++ AVS+ L L + LF + G+ TP + Sbjct: 3 NELDIFCAVAKHGSMSRAAAELHLSQPAVSQRLRALEEQYGLQLFRRTNRGVELTPAGET 62 Query: 71 MEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNALSKQIYQRYPQATIK 129 + + +Q+ L + + + A S + L Q+YP A I+ Sbjct: 63 LVRYAQRILQLERSLQAEMASLRAAEPKQVVIGATSAIGGYALPCTVYLFQQKYPDARIQ 122 Query: 130 LRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDH 188 L+ D + + G VD+ L+++LP V+ + + Sbjct: 123 LQIGKRCDVIQRLEDGLVDLALVEGP-------LVTALPDDWQVSVISEEELVLITPPTG 175 Query: 189 PALHQTW-NLDTFLRYPHISICWEQSDTWALDNVLQELGRERT---IAMSLPEFEQSLFM 244 P + D R P I A++ Q GR+ IA+ L + Sbjct: 176 PLAGKEAYTADDLTRLPLIIREPGSGTRMAVEEGWQAAGRDLRDLNIALELTGVDAIKTS 235 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQ-LPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 A +A R+C L + L +TL+ K+ Sbjct: 236 VAS--GHGVALVSRWCVRAEARMGHLRIAPL-------TDIAFTSRWTLIVPKQGMKGAM 286 Query: 304 IVWLRETIKN 313 L T+++ Sbjct: 287 ERALLRTLRS 296 >UniRef50_D2MBA7 Transcriptional regulator, LysR family n=1 Tax=Rhodopseudomonas palustris DX-1 RepID=D2MBA7_RHOPA Length = 304 Score = 211 bits (539), Expect = 2e-53, Method: Composition-based stats. Identities = 52/315 (16%), Positives = 109/315 (34%), Gaps = 20/315 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 + L + + S+ KAA R++V PSAVS+ +A+L D LF S +G+ TP Sbjct: 1 MRFLTLRYFNEVARLGSIRKAADRLHVAPSAVSRQIAQLEHELDAVLFERSKVGVQLTPA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + + + ++ + L L+ +L L + RYP Sbjct: 61 GEVLARQSNRIFRDLDRARNEIDDLRGLRRGEVSLFVIEGLVSGLLPDLLANFHHRYPAV 120 Query: 127 TIKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 T +++ D ++A+ E DIG + + E+++ + + Sbjct: 121 TFRIQTGSTDRIIEALLEDEADIGITFNATPRPEIEVIAEHV----------EPIACLVA 170 Query: 186 KDHPALHQ-TWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 H ++ + LD + + + R + ++ E + M Sbjct: 171 PTHEFANRVSLTLDDICTQTIALPEHSFGLRQVFERAIAKRQRTPQVLVTTNSLELTKRM 230 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 AA ++A P +LH L A+P+ + + H+ Sbjct: 231 AAT--GQVIAFMPALTV-ITELHSDALRAIPIADPAFAAARSSISI----HRDRPLPHAP 283 Query: 305 VWLRETIKNLYASMA 319 + + + ++ Sbjct: 284 QAFLKALADAIRGLS 298 >UniRef50_C6DDI5 Transcriptional regulator, LysR family n=4 Tax=Enterobacteriaceae RepID=C6DDI5_PECCP Length = 310 Score = 211 bits (539), Expect = 2e-53, Method: Composition-based stats. Identities = 72/320 (22%), Positives = 124/320 (38%), Gaps = 21/320 (6%) Query: 1 MKKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPL 60 M+ +DLNLL+ +L +ERSV+ AA ++++ AVS +LA+LR FDDPLF+ + Sbjct: 1 MENDFRGVDLNLLVTFLVLYRERSVSVAADKLHLGQPAVSGALARLRTLFDDPLFIRTGQ 60 Query: 61 GLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQ 118 + PT + L+ + +L +P P L + + ++ L K+ Sbjct: 61 VMRPTARADYLATQLSPAFEQLQSVLGEPESFDPLTDSRAITLGMTDWVEIWLMPLLLKR 120 Query: 119 IYQRYPQATIKLRNWDYDS-LDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFS 177 + P I L D ++ + VD+ S + L S Sbjct: 121 LKANAPHLRINLVATDPFLDVERLENDSVDLVISVASPQAG----------WLKQRALLS 170 Query: 178 DVPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPE 237 AL L+ + + H+ + + + +D++L++ G RTI + P Sbjct: 171 SGFRALWHPQQLALPSPVPLEVYSQQRHLLVTYRERAHGIVDDMLEKQGMTRTIYYTTPH 230 Query: 238 FEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKR 297 F + ++ + + Q + L +PL + LWH R Sbjct: 231 FSALPGILQHTPSVA-TVPEKLATLWCQHYGLNDSPVPLDLP-------TYTLSALWHAR 282 Query: 298 NSHNPKIVWLRETIKNLYAS 317 NP I WL E I A Sbjct: 283 QDSNPAIAWLYEQIAEAIAE 302 >UniRef50_C4ZIH4 Transcriptional regulator, LysR family n=1 Tax=Thauera sp. MZ1T RepID=C4ZIH4_THASP Length = 318 Score = 211 bits (539), Expect = 2e-53, Method: Composition-based stats. Identities = 40/313 (12%), Positives = 91/313 (29%), Gaps = 20/313 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 + +N L + + SV AA + V+ +AVS++L +L PLF G + Sbjct: 1 MKINQLRYFLAVADKGSVRAAATALGVSAAAVSQALRELETAMGTPLFTRESHGAVLSYA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + + + + + +L + + P Sbjct: 61 GRQFLIHARLILGQVSRAEAEIAQIRGATGGSLTIGVTPWVAQSILPHALARFHALRPDV 120 Query: 127 TIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRK 186 + + + G +D+ + + LF V R Sbjct: 121 HLDVTEAVGTVHPLLRDGTLDLVIAIPPPRQEASI--------FYTRELFRCDLAVVGRL 172 Query: 187 DHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRE--RTIAMSLPEFEQSLFM 244 HP T +L+ + + L N+L G ++ M Sbjct: 173 GHPFASAT-SLEELVDQDWVLTMLGAGQDEPLVNLLAPHGIAPPPHRVHYARSALVAISM 231 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 + L + P L + + ALP+ + E+ ++ + ++ + Sbjct: 232 LEVGNMLTICPWPLL---ETPLLRGRVQALPI-----RNPLPEMHTAIIVRRNDTLSAAG 283 Query: 305 VWLRETIKNLYAS 317 + ++ + Sbjct: 284 QLFIDCFEDATRT 296 >UniRef50_B5I0V5 LysR-family transcriptional regulator n=10 Tax=Actinomycetales RepID=B5I0V5_9ACTO Length = 300 Score = 211 bits (539), Expect = 2e-53, Method: Composition-based stats. Identities = 55/311 (17%), Positives = 107/311 (34%), Gaps = 19/311 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 L+L L L L + SV+ AA+ +++T SAVS+ ++KL L + G+ T Sbjct: 2 LNLERLRTLDALARHGSVSGAAEGLHITTSAVSQQMSKLEREVGQQLLAKNGRGVRLTDA 61 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + A + + Q + + LAA + + A + +P Sbjct: 62 GRLLADHAARILSQVEVAQSDLEAQRGQVVGELRLAAFPTAVRGLFPAAIAGLRSAHPAL 121 Query: 127 TIKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 I R + + ++ A+ RG+ D+ + +P + + D V + Sbjct: 122 RISSREMEPEAAVLAVIRGDYDLAVVLDWYNKPL-----PMPDGLVKASIVDDTADVAMP 176 Query: 186 KDHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 H +L+ F ++ + L + L+ G E +A E L + Sbjct: 177 ATHRHAHRDEVDLEDFADDDWVTWGEGEFCDEWLMHTLRSKGIEPRVAHRAEEHPTQLAL 236 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 L + APR + V + ++ + +W P I Sbjct: 237 V--GAGLGVCVAPRL-GRGPIPQGVRTVPV--------RQSVRRHIYAVWRADADRRPSI 285 Query: 305 VWLRETIKNLY 315 E +K+ Sbjct: 286 RAAVEALKSAA 296 >UniRef50_Q4ZWE4 Regulatory protein, LysR:LysR, substrate-binding n=38 Tax=Bacteria RepID=Q4ZWE4_PSEU2 Length = 347 Score = 211 bits (539), Expect = 2e-53, Method: Composition-based stats. Identities = 45/314 (14%), Positives = 93/314 (29%), Gaps = 21/314 (6%) Query: 7 TLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTP 66 L L L + Q S T AA ++++ SA S +L +L + D LF L Sbjct: 2 KLSLRQLQIFCAVAQHGSTTSAAISVSLSQSATSAALNELESALDTRLFDRVGKRLVLND 61 Query: 67 LMVSMEQNLAEWMQMSNLLLDK-PHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQ 125 ++ ++ + + + + + + +L + ++ Q P Sbjct: 62 NGHALLPQARRMLENAQQIEASFLPGHAGLKTRLRVGCSTTIGNYVLPLILGELRQSTPH 121 Query: 126 ATIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 + + + + E+D+G H + E D + Sbjct: 122 LRVDVDMANSMAIARRVADFEIDMGLIEGPCHLP----------ELSAEPWLIDELLIAA 171 Query: 185 RKDHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 + HP Q LD + ++ +L + + E Sbjct: 172 GQRHPLALKQQVTLDDLRTAEWLLREPGSGTREEVEQLLLRHLHDLAETRQIGSSEAIKH 231 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 AQ + ++ R+ ++ LV LP F L+ H+ +P Sbjct: 232 TLAQ--GIGISCLSRWVVRDLLASEV-LVELPHALPALT-----RRFFLIRHRDKYISPG 283 Query: 304 IVWLRETIKNLYAS 317 + E + Sbjct: 284 LERFWEKCSQFVSQ 297 >UniRef50_Q5R0U0 Transcriptional regulator, LysR family n=1 Tax=Idiomarina loihiensis RepID=Q5R0U0_IDILO Length = 305 Score = 211 bits (539), Expect = 2e-53, Method: Composition-based stats. Identities = 42/317 (13%), Positives = 90/317 (28%), Gaps = 28/317 (8%) Query: 1 MKKSIT-TLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSP 59 M S + L + + +E +AA+R+N++ ++ ++ KL L Sbjct: 1 MAISTRTRITLRAMEQFIAVAEELHFHRAAERLNMSQPPLTSAIRKLEDDIGVTLIERGK 60 Query: 60 LGLSPTPLMVSMEQNLAEWMQMSNLLLDKPHH-QTPRGLKFELAAESPLMMIMLNALSKQ 118 L TP + E ++ + ++ R L + L + + Sbjct: 61 RVLGLTPAGKNFIDEARETLRQAEQVVTATQDAAAGRTGLVRLGYVGSSLYGRLPDVIRD 120 Query: 119 IYQRYPQATIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFS 177 Q +P ++L+ + A+ +D+G I+ S Sbjct: 121 FRQSHPDVRLELKEATTAAQVAALRNNALDVGILIPPLVNA---------EDIEQIPFDS 171 Query: 178 DVPCVWLRKDHPALHQT-WNLDTFLRYPHISIC--WEQSDTWALDNVLQELGRERTIAMS 234 D C+ + K+HP ++ L P I + + + +G T+ Sbjct: 172 DRLCLAIPKEHPLNKRSNLTLTDLSEEPFILWPMVEGRGFHLQVIRLCANVGFVPTVTQE 231 Query: 235 LPEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLW 294 L + + + + + E TL Sbjct: 232 AHGMHAVLSL----------VSVGAGVSVVPQSMSGFRGDQISYHPLTGSEPEFDLTL-- 279 Query: 295 HKRNSHNPKIVWLRETI 311 +P +I Sbjct: 280 -SHRHLSPSAKAFVRSI 295 >UniRef50_A4SSQ1 Transcriptional regulator, LysR family n=2 Tax=Aeromonas RepID=A4SSQ1_AERS4 Length = 322 Score = 211 bits (539), Expect = 2e-53, Method: Composition-based stats. Identities = 101/314 (32%), Positives = 167/314 (53%), Gaps = 10/314 (3%) Query: 4 SITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLS 63 + +DLNLL+ LQ+L++ER+ ++AA+R++++ SAVSK+L +LR FDDPLFV S GL Sbjct: 5 QLGRIDLNLLIILQVLLEERNGSRAARRLHLSQSAVSKALGRLRETFDDPLFVRSAYGLE 64 Query: 64 PTPLMVSMEQNLAEWMQMSNLLLDKP-HHQTPRGLKFELAAESPLMMIMLNALSKQIYQR 122 PT + ++Q L + + L+ P +F +A+ + ++ ++ Sbjct: 65 PTARALVLQQQLQPILLSLDNLIQPPDFDPASTEREFVIASMDSAFTLFAPLYLSELKRQ 124 Query: 123 YPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCV 182 P ++ W +SL +++G+VDI F+ RE+ S L +LP AI +L D Sbjct: 125 APGIRLRYEEWTENSLTEMSQGQVDIAFTVRENCISSDFRLDTLPNAICQRLLAIDDLTC 184 Query: 183 WLRKDHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQS 241 ++ DHPALH+ W+L +L YPH+ E D W LD+ L + R I ++P FE + Sbjct: 185 LVQHDHPALHEPEWDLARYLAYPHVQTYCEGRDRWMLDHKLAGMDLYRRIEATVPSFEAA 244 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 L M D + + + Y ++ Q++ L + LP+ D L+WH+R+ + Sbjct: 245 LRMGMHSDMI-VTLSRLYARHATQVYPLVPLPLPIALDSISHL-------LIWHQRHEED 296 Query: 302 PKIVWLRETIKNLY 315 P WLRET+ L Sbjct: 297 PGHRWLRETLLALI 310 >UniRef50_C4I668 Transcriptional regulator, LysR family n=80 Tax=Proteobacteria RepID=C4I668_BURPS Length = 297 Score = 211 bits (539), Expect = 2e-53, Method: Composition-based stats. Identities = 68/305 (22%), Positives = 117/305 (38%), Gaps = 25/305 (8%) Query: 15 CLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSMEQN 74 L L+ E +VT+AA R+N++ +VS LAKLR F DPL + P G+ PT + + Sbjct: 14 TLDALLSEHNVTRAAARLNLSQPSVSIHLAKLRDIFGDPLLLPGPRGMRPTARADELREP 73 Query: 75 LAEWMQMSNLLLD--KPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQATIKLRN 132 L ++ + P + +AA ++ + P + + Sbjct: 74 LRRALETLGRAVSPGAPFDPAASAHTWRVAASDYSESTVVLPALNGLRAAAPGTRLAVVE 133 Query: 133 -WDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPAL 191 +G++D+ F + P + + LF++ + R HP L Sbjct: 134 TVPSRIAKQAEQGDIDLAF----------HITECAPGNLRHRALFTERYVLVGRAGHPRL 183 Query: 192 HQTWNLDTFLRYPHISICW-EQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQPDN 250 + L F + H+ + D L +LG R + +S+P F + A D Sbjct: 184 KRRPTLAQFCKLDHVIVSPDGGGFQGGTDQALAKLGLARRVVLSVPHFLFMMSAVANSD- 242 Query: 251 LLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWLRET 310 L+A P ++ L +V P+ +LWH+R+ +P WLRE Sbjct: 243 -LVAMMPSRLVRDSRA--LQVVEPPVDVP-------GFRMAMLWHERSHRDPAHQWLREH 292 Query: 311 IKNLY 315 I Sbjct: 293 IAASV 297 >UniRef50_A8PL83 Hydrogen peroxide-inducible genes activator (Morphology and auto-aggregation control protein) n=1 Tax=Rickettsiella grylli RepID=A8PL83_9COXI Length = 310 Score = 211 bits (539), Expect = 2e-53, Method: Composition-based stats. Identities = 44/297 (14%), Positives = 83/297 (27%), Gaps = 25/297 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++ L L L + R KAAK +V+ +S L KL LF + T Sbjct: 1 MNFRDLSYLLALAEYRHFGKAAKACSVSQPTLSIQLKKLEQTLGMKLFERGQKKVLMTTS 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPH-HQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + M + +Q + + P + L S L +L + I Q P+ Sbjct: 61 GLRMVEKAKHIVQAVDEFKRFAKLEKDPFLAELRLGVISSLCPYLLPYILPSIMQELPKI 120 Query: 127 TIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 T+ L + L + G++D + LF + + + Sbjct: 121 TLYLYEDKTENLLIQLKEGKLDAVVLALPIP----------HKGLYLRPLFKEPFFLIMP 170 Query: 186 KDHPA-LHQTWNLDTFLRYPHISICWEQSDTWALDNVLQ-ELGRERTIAMSLPEFEQSLF 243 + H + +L+ Y + + +V + E Sbjct: 171 RSHALYDAKKLDLNDLGHYNLLLLEEGHCFRDQALDVCHKRSNLKEKTNYRATSLETLRH 230 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 M + P + + E +LW K ++ Sbjct: 231 MV--GTGAGITLLPLLALETHPF---------IKNVPLASPVPERKIGMLWRKGSAL 276 >UniRef50_A6SXB4 Transcriptional regulator, LysR family n=1 Tax=Janthinobacterium sp. Marseille RepID=A6SXB4_JANMA Length = 302 Score = 211 bits (539), Expect = 2e-53, Method: Composition-based stats. Identities = 48/312 (15%), Positives = 91/312 (29%), Gaps = 22/312 (7%) Query: 7 TLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTP 66 + L L + + T AA+ + V+ S++S + L LF L T Sbjct: 2 NITLRQLRAFVTVAETGKFTLAAELLGVSQSSLSLLVRDLENLLGLRLFDRHTRRLELTD 61 Query: 67 LMVSMEQNLAEWMQMSNLLLDKPHH-QTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQ 125 + + + +++ + + +AA S ++ L K +RYP Sbjct: 62 AGHDLLPVAQKTLMDLLSVVENSRDLLALKKGRVTIAAGSLHAATVIPDLLKSFNRRYPG 121 Query: 126 ATIKLRNWDYDSLDAIT-RGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 + + + + + G VD+G S +V+ D V + Sbjct: 122 IRVIVEDVAERQVRELIVAGTVDVGIGMTLDGDNSML----------AQVIGRDKYAVLM 171 Query: 185 RKDHPALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 K+H + +T I + LD L +G T A + Sbjct: 172 HKEHQLMRKKTITWQDIAATQPILLKPPSLIRTYLDQHLARVGITLTPAYEVALPWTMTG 231 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 M + +A + L L +E +L +P Sbjct: 232 MVRA--GVGVAIVTTGVLPVAERMGLELR-------TISAPVIERELAVLTRAGYPLSPA 282 Query: 304 IVWLRETIKNLY 315 LR + Sbjct: 283 AQSLRTHLLEEL 294 >UniRef50_D0KZQ9 Transcriptional regulator, LysR family n=3 Tax=Proteobacteria RepID=D0KZQ9_HALNC Length = 300 Score = 211 bits (539), Expect = 3e-53, Method: Composition-based stats. Identities = 36/317 (11%), Positives = 101/317 (31%), Gaps = 22/317 (6%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 + L L L+ + + + S +KAA ++++ VS + ++ ++ PL + Sbjct: 1 MRRLTLRQLVVFEAVARHLSFSKAAIELHLSQPGVSMQVRQIESFVGLPLTEQVGKKIFL 60 Query: 65 TPLMVSMEQNLAEWMQMSNLLLDKPHHQTP-RGLKFELAAESPLMMIMLNALSKQIYQRY 123 T +++ L + + +A S + + + RY Sbjct: 61 TEAGRNVQHAAKNISAQLTDLGNALARLKGVEEGQLNIAVTSTV-NAVATEILAGFRSRY 119 Query: 124 PQATIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCV 182 P+ +I L + + L+ ++ +D+ G+ ++ + V Sbjct: 120 PKVSIHLEVSNRAEVLNLLSENRIDLAIMGQVPDGL----------GLEATQFMDNPLVV 169 Query: 183 WLRKDHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQS 241 DHP + +T + + A+ + +M + E Sbjct: 170 IAPIDHPWVGRTDIPIAELANESFLVREDGSGTQGAMVRFFSARELKIHQSMQMNSNEAI 229 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 L + + + + L +L ++++ + + + ++ + Sbjct: 230 KMAVQAGLGLGI-ISKQTLEMELMLERLAVLSV-------EGFPIMRHWFIVHRSDKLLS 281 Query: 302 PKIVWLRETIKNLYASM 318 P + + A++ Sbjct: 282 PVASAFKTYLLAESATL 298 >UniRef50_B3EBY3 Transcriptional regulator, LysR family n=3 Tax=Proteobacteria RepID=B3EBY3_GEOLS Length = 288 Score = 211 bits (539), Expect = 3e-53, Method: Composition-based stats. Identities = 39/256 (15%), Positives = 89/256 (34%), Gaps = 15/256 (5%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L+ L + S T+ A+R V+ A+S S++KL LF+ + + TP Sbjct: 1 MELHQLKQFVAAAESESFTRGAERAFVSQPALSASISKLEDEMGTQLFIRNKRSVVLTPA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQAT 127 + + + + H L + L + + L +Q + P+ Sbjct: 61 GRKLLKRAKLIIAECAQAKAELKH-HEVQRSLRLGVINTLAIGQVAKLIEQYRRENPEVL 119 Query: 128 IKLRNWDYDSLDAIT-RGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRK 186 + + + D ++ + +D + + EVLFS+ V L Sbjct: 120 LDVTDASQDQIEKLQKEARIDFALTRLVQGKEKKG---------RQEVLFSEPYVVALPL 170 Query: 187 DHPALHQ-TWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMA 245 H + + P I+ + +L+E G + + ++++ + Sbjct: 171 GHHLSGRKEVSFSELAEEPFIARTH-CESRALIGELLKEKGVRLNVVYKTNQDDRAISLV 229 Query: 246 AQPDNLLLATAPRYCQ 261 + +A P++ Sbjct: 230 E--VGVGIAIIPQHYA 243 >UniRef50_A6T102 Transcriptional regulator, LysR family n=1 Tax=Janthinobacterium sp. Marseille RepID=A6T102_JANMA Length = 305 Score = 211 bits (539), Expect = 3e-53, Method: Composition-based stats. Identities = 49/312 (15%), Positives = 99/312 (31%), Gaps = 22/312 (7%) Query: 7 TLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTP 66 L L L + + T AA+R+++T SA+S + +L + LF + T Sbjct: 2 NLTLRQLRAFVAVAELSQFTLAAERLHITQSALSMLIRELEKELELKLFDRHTRMVRLTE 61 Query: 67 LMVSMEQNLAEWMQMSNLLLDKPHHQTP-RGLKFELAAESPLMMIMLNALSKQIYQRYPQ 125 + + + + + + +A + L + +L ++ QR+P Sbjct: 62 HGEEFLLTARRVLSELEVAVMQSRESVNYKRGRVAVACSTVLAVTLLTPFMREFAQRHPG 121 Query: 126 ATIKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 + LR+ +S+ + G+VD + + I +FSD + + Sbjct: 122 IKLMLRDVAEESIKKRLLNGDVDFSVGTQLNPES----------EISELPIFSDHFVLLM 171 Query: 185 RKDHPALHQ-TWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 K HP Q L +YP I++ S L+ L+ L IA + Sbjct: 172 PKGHPLTKQTRIPLQAISQYPVIAMAPSSSIRAVLEAHLKRLDITLNIAYEASFPSTIIA 231 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 M + + + P + + + + S +P Sbjct: 232 MVR--NGMGITILPANAHQLTSTQGIVVR-------NFGKSNFTRTVCTFQLRNRSLSPA 282 Query: 304 IVWLRETIKNLY 315 + Sbjct: 283 AELFHTELLEYV 294 >UniRef50_C4WNV4 Probable cat1 operon transcriptional activator n=1 Tax=Ochrobactrum intermedium LMG 3301 RepID=C4WNV4_9RHIZ Length = 309 Score = 211 bits (539), Expect = 3e-53, Method: Composition-based stats. Identities = 38/309 (12%), Positives = 91/309 (29%), Gaps = 26/309 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L + + T AA+R+ ++ +S + L LF S ++ T Sbjct: 7 MELRHLRYFLAVADALNFTTAAQRLGISQPPLSHQIKLLEIELGVDLFERSSRRVTLTKA 66 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQ-TPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + ++ + + + +++ + +YP Sbjct: 67 GEVFRRRALSILEQVKMASEHARSIGQGNSGVLNIGLTGSILIGHFAHIMNTFCAQYPDV 126 Query: 127 TIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 ++ + + A+ G ++ + E+ + + V L Sbjct: 127 EVRTHEMSPGEQIIALKAGRTELSILRSPPE----------DSDLTLELAWPEKIVVVLS 176 Query: 186 KDHPAL-HQTWNLDTFLRYPHISIC-WEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 DH H++ L+ ++S+ + L N G +I + E L Sbjct: 177 ADHRLAHHESIRLEWLNNEKYVSLRLADSRFANYLLNACIANGFVPSITQQVVESYSLLS 236 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 + A +A AP ++ + + Q L + ++ NP Sbjct: 237 LVAA--GFGVALAPESVSQLSR--------PNVIYRTLQHPPLVADVYAVSL--STDNPV 284 Query: 304 IVWLRETIK 312 + Sbjct: 285 TQNFLNVLL 293 >UniRef50_B9QYV9 LysR substrate binding domain protein n=1 Tax=Labrenzia alexandrii DFL-11 RepID=B9QYV9_9RHOB Length = 303 Score = 211 bits (539), Expect = 3e-53, Method: Composition-based stats. Identities = 51/324 (15%), Positives = 105/324 (32%), Gaps = 31/324 (9%) Query: 1 MKKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPL 60 M+ + D L +M+ S AA++++++ SAV++ + KL LF + Sbjct: 1 MRINF---DFGDLEAFLAVMETASFHLAAEQLHLSQSAVTRRIQKLEQVLGSKLFERTTR 57 Query: 61 GLSPTPLMVSMEQNLAEWMQMSNLLLDKPHH----QTPRGL-KFELAAESP-LMMIMLNA 114 + PT ++ E + + + +A + + L Sbjct: 58 AVKPTLAAKRLQSRAEEMLDNAEETTLAMRDESVAFAHQKGAVVTIAMIPTLIAPLFLPG 117 Query: 115 LSKQIYQRYPQATIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYE 173 + Q A I+L + D +A++ GE D G + SL +E Sbjct: 118 -LSSMRQADETARIRLMDLSANDVAEAVSSGEADFGICS----------IGSLEANTHFE 166 Query: 174 VLFSDVPCVWLRKDHPA-LHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIA 232 F D + + +H + L I + +D+ + + Sbjct: 167 PWFDDEIVLAIPIEHQLAAQDNVSWPDLLNEDLILPARGTGNRLLIDDAMAKGRISAQWT 226 Query: 233 MSLPEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTL 292 + ++ M + +A PR L LP + + P L Sbjct: 227 YEVGRSTTAMEMV--SGGVGIALLPRSAATSTFAQGLRFKKLP-------KPVVTRPIGL 277 Query: 293 LWHKRNSHNPKIVWLRETIKNLYA 316 L S P + ++++++ A Sbjct: 278 LTRMGVSDTPVVSSVKDSLREYAA 301 >UniRef50_UPI000178953B transcriptional regulator, LysR family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI000178953B Length = 284 Score = 211 bits (538), Expect = 3e-53, Method: Composition-based stats. Identities = 43/304 (14%), Positives = 99/304 (32%), Gaps = 27/304 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++ L + + +E S+T+AA+R+ PS V+ + +L PLF+ S G+ T Sbjct: 1 MESGDLRIFRAVAEEGSITRAAQRLQYVPSNVTGRIRQLEDSLQTPLFIRSNRGMELTGA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQAT 127 + + + + + + + A L Y R+P+ + Sbjct: 61 GERLFGYTRQILNLLDEAEKSVQAEDTPRGPLRIGAIESTAAAYLPGRLADYYARHPEVS 120 Query: 128 IKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRK 186 + L + L + E+D F + + S +++ + Sbjct: 121 LSLTTGNSSVLMQQVLDRELDGAFVYGPLTHPMLKQIPS----------YNEELVLISEA 170 Query: 187 DHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAA 246 + + + P + + + ++ +L E G + + E L A Sbjct: 171 GAASQQEQL------QKPMLILSTGCTHRSRVERLLAEAGVQHPQIIEFGSLEAVLGGVA 224 Query: 247 QPDNLLLATAPRY-CQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIV 305 L +A PR + + + LP + + ++H+ + + Sbjct: 225 S--GLGVALLPRSNAVSLSNEKNIAAMTLPESYRDVV-------VYFIYHRDVPLSSALR 275 Query: 306 WLRE 309 E Sbjct: 276 AFLE 279 >UniRef50_Q7WMW6 Putative LysR-family transcriptional regulator n=3 Tax=Bordetella RepID=Q7WMW6_BORBR Length = 303 Score = 211 bits (538), Expect = 3e-53, Method: Composition-based stats. Identities = 46/279 (16%), Positives = 91/279 (32%), Gaps = 18/279 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +DL L +L + + +AA+R+++ +S ++ KL LF P LS T Sbjct: 1 MDLRQLQQFVVLSETLNFHRAAERLHMAQPPLSTAIRKLEDELGIVLFDRKPRSLSLTVA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQ-TPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 +M ++ + + L + + + + +L + RYP+ Sbjct: 61 GAAMLKHARRTLSNVDELQRCAREYVSGDQGRIVVGFSNTASNAVLPRILHSFQARYPRV 120 Query: 127 TIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + L + + + VD+ L L D + + Sbjct: 121 ELVLHESTTHELVSELAAHTVDVALLRTPLFDACDAELID---------LEQDHFILAVP 171 Query: 186 KDHPALHQTW-NLDTFLRYPHISICWE--QSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 DHP Q+ L I+ E + + E G + + + ++ Sbjct: 172 ADHPLAQQSCARLADLDGQRFIAFSREKVPAMHAIISLAFGEAGVTPKVVQQIVQVPTAI 231 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQ--LPLVALPLPFD 279 +A + +A P Y + LP+V LP Sbjct: 232 ALAES--GIGMALVPSAAARYLRTGARLLPVVDLPASLR 268 >UniRef50_C6XNZ9 Transcriptional regulator, LysR family n=1 Tax=Hirschia baltica ATCC 49814 RepID=C6XNZ9_HIRBI Length = 293 Score = 211 bits (538), Expect = 3e-53, Method: Composition-based stats. Identities = 46/299 (15%), Positives = 85/299 (28%), Gaps = 24/299 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 + + L C + +E + A+R+N+T VS+ + L PLF + + TP Sbjct: 2 FEFSQLRCFVAVAEEMHFGRGAERLNMTQPPVSRQVQVLERVLGTPLFDRTSRSVKLTPA 61 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQT-PRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 +++S ++ + L L + P Sbjct: 62 GKRFLVEAKHILRISQDAAAIAKRVASGEVGNLAISFTAASGYSYLPHLIDVCCSKLPST 121 Query: 127 TIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + LR D + A+ G+VDIG + + + + + Sbjct: 122 QLILREMITSDQIQALESGQVDIGLLRGRFNL----------KGYEKRRILREKLIAAIP 171 Query: 186 KDHPAL-HQTWNLDTFLRYPHISICW--EQSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 P +T L F I L+ + E + + L Sbjct: 172 ASDPKASKETLTLQDFHASNFIMYTPQRAGYFHDMLNKHFERANVEPIFTQYMSQIHTML 231 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 + L A P + + L LP V ++W K N + Sbjct: 232 SLVHAN--LGAAIVPE-AASVLKFSNVEYRPLELP------SHYPVELHIVWKKNNDNP 281 >UniRef50_A1U8Q8 Transcriptional regulator, LysR family n=1 Tax=Marinobacter aquaeolei VT8 RepID=A1U8Q8_MARAV Length = 312 Score = 211 bits (538), Expect = 3e-53, Method: Composition-based stats. Identities = 74/317 (23%), Positives = 130/317 (41%), Gaps = 26/317 (8%) Query: 7 TLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTP 66 DLNLL L E++VT+A +R++++ +VS +L +LR F DPLF+ + PT Sbjct: 4 NYDLNLLRTFHALYLEQNVTRAGERLHLSQPSVSAALGRLRELFKDPLFIRDRQRMRPTE 63 Query: 67 LMVSMEQNLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQIYQRYP 124 + + + + L+ +P FE+AA +++L AL+ + ++ P Sbjct: 64 TADHLFPVIEAALTDLDGLITSERDFSPATEQRHFEIAANDYFEVLILPALASVLREQAP 123 Query: 125 QATIKLRNWDYDSLDA-ITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVW 183 T+++R D +A I G D+ F + P + + + Sbjct: 124 GITLQVRRLSQDMSEAGIMSGTTDLAFGRQVDP----------PDNLVVREVILEGIECL 173 Query: 184 LRKDHPALHQ-----TWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEF 238 + +HP L + D F RY H+ I + L+ +R +A+++ F Sbjct: 174 VGNEHPLLERLKGNGQMTRDDFERYAHVLIQPHTRLKSGIFKQLESQNLKRKVALAVTYF 233 Query: 239 EQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRN 298 + + + CQ++ + + VA P+ FD PF L WH R Sbjct: 234 MAVPALLEGSSLIA-SLPTGLCQHFRRQFAVTPVAPPVAFDA-------FPFHLSWHHRY 285 Query: 299 SHNPKIVWLRETIKNLY 315 +P WLRE I Sbjct: 286 QKDPAHRWLREQIIACC 302 >UniRef50_Q4K4U2 Transcriptional regulator, LysR family n=17 Tax=Pseudomonadaceae RepID=Q4K4U2_PSEF5 Length = 309 Score = 211 bits (538), Expect = 3e-53, Method: Composition-based stats. Identities = 43/313 (13%), Positives = 101/313 (32%), Gaps = 22/313 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +D L + +E V +AA+R++++ A+S+ + +L D LF S L PT Sbjct: 1 MDFKQLRYFVAVYEEGHVGRAAERLSISQPALSQQIRQLEQNLDVSLFERSSKRLLPTLA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNALSKQIYQRYPQA 126 ++ + + + + + + + ++ + +++ + P Sbjct: 61 AHTLYNHALPLLDGLQQAREALRNFKGQALRTLAIGVLQTVHTSLVPQMLERVRKAQPHL 120 Query: 127 TIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 +++ + + G +DIG S + L+ D + + Sbjct: 121 VVQIYELTGLEIERRLLNGSLDIGISYLPPRQP----------GLHGVPLYEDELTLVIP 170 Query: 186 KDHPALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 + HP + ++ P + + E L LGR + L L Sbjct: 171 EQHPLREFKKVSMSQAAELPMLLLGEEFQIRQIWQAQLANLGRRPQVQAELNNMAGILDS 230 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 L P Q + +L L + ++ + L+ + Sbjct: 231 LPHTR--LATVLPGRSQQQHGNKELLWKPL-------SEPRVPLKVGLVCRDLQRQQGTL 281 Query: 305 VWLRETIKNLYAS 317 LR +++ + Sbjct: 282 ELLRSLLEDSMNA 294 >UniRef50_C9XXC7 HTH-type transcriptional regulator budR n=7 Tax=Enterobacteriaceae RepID=C9XXC7_CROTZ Length = 290 Score = 211 bits (538), Expect = 3e-53, Method: Composition-based stats. Identities = 50/309 (16%), Positives = 93/309 (30%), Gaps = 26/309 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L + Q R T+AA+ + ++ +S+ + +L PL G+ T Sbjct: 1 MELRYLRYFVAVAQTRHFTRAAELLGISQPPLSQQIQRLEREVGTPLLRRLTRGVELTEA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHH-QTPRGLKFELAAESPLMMI-MLNALSKQIYQRYPQ 125 + Q+ + + +S+ L+K + S + +L + RYP Sbjct: 61 GEAFYQDACQILALSDAALEKTRGIARGVNGTLSIGISSSNAFHPHIFSLLHEFQHRYPA 120 Query: 126 ATIKLRNWD-YDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 T+ + + + + G +D F L + + + L Sbjct: 121 ITLLQQEANMASLMHDLEEGLLDAAFVRLPCESSKAFNLRLIDI---------EPMVAAL 171 Query: 185 RKDHPALHQ-TWNLDTFLRYPHISICWE--QSDTWALDNVLQELGRERTIAMSLPEFEQS 241 + HP + L P I E + N G + + S Sbjct: 172 HRSHPLSGRDEVALSELAGTPLILFPHEVAPGLYELVFNACLRAGLTPADSQQASQLSSS 231 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 L M A P Q + F + L+ L W K + Sbjct: 232 LSMVAA--GFGFTLVPVSMQCIG--------HPEVTFHRLSDQTLKTDIALAWRK-FERS 280 Query: 302 PKIVWLRET 310 P + L E Sbjct: 281 PSVRRLVEM 289 >UniRef50_Q9FD34 PnbR n=2 Tax=Pseudomonas RepID=Q9FD34_PSEPU Length = 348 Score = 211 bits (538), Expect = 3e-53, Method: Composition-based stats. Identities = 70/341 (20%), Positives = 122/341 (35%), Gaps = 45/341 (13%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 LDLNL+ +M+ERSV +A++R++++ SAVS +L++LR +FV + G+SP Sbjct: 23 FDKLDLNLIRVFDAVMEERSVLRASQRLHLSQSAVSHALSRLREGLGQEIFVRTGKGMSP 82 Query: 65 TPLMVSMEQNLAEWMQMSNLLLDKP---HHQTPRGLKFELAAESPLMMIMLNALSKQIYQ 121 T + + L + + L + F +AA + +L L+ Q+ + Sbjct: 83 TSYALEISGALHAALLSMSKALSQAATPFSPQSVCRSFVIAANDYVSATLLPQLNHQLSK 142 Query: 122 RYPQATIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEV-LFSDV 179 P +++ D + I G +D+ S+P + LF D Sbjct: 143 VAPGIDLQITPATRLDLAEQIDLGRIDVAIG----------TFRSVPERFRTKPVLFQDE 192 Query: 180 PCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSD---------------------TWAL 218 HP L +RYP + AL Sbjct: 193 -VFICSGTHPISANKPQLQDLVRYPLAVVSLGGEGEGMLSGYILERGLARQAQMYDRTAL 251 Query: 219 DNVLQELGRERTIAMSLPEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPF 278 + L E G + LP F + + L + P + + + + LP Sbjct: 252 EQALNEAGLSMRRQIVLPHFLALPMLLEGSELLAIVPQP-LARTFARTLGFKIKPLP--- 307 Query: 279 DESQQKKLEVPFTLLWHKRNSHNPKIVWLRETIKNLYASMA 319 L+WH N ++P +WL E I ++ Sbjct: 308 ----YPAARQQLDLIWHSSNDNDPAQLWLHEQISEAANEIS 344 >UniRef50_D1BTU3 Transcriptional regulator, LysR family n=1 Tax=Xylanimonas cellulosilytica DSM 15894 RepID=D1BTU3_XYLCX Length = 303 Score = 211 bits (538), Expect = 3e-53, Method: Composition-based stats. Identities = 34/304 (11%), Positives = 85/304 (27%), Gaps = 25/304 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L + L + ++AA ++++T A+S+++ +L + L + ++ TP Sbjct: 1 MELRHIRYFAGLAETLHFSRAALQLHMTQPALSQAMRQLESEVGAKLLDRTTRQVTLTPA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHH-QTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + + + +L + K + P Sbjct: 61 GQRLAHDARRILAAVEESEAAVRRIAAGGADVLRVGLTHCAAPALLPRVVKTLRATLPGV 120 Query: 127 TIKLRN--WDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 +K+R + G +D+G + +++ + L Sbjct: 121 ALKVRPDLLSGQIATEVGDGRIDVGIVRGAVTAV----------GLASAPAYAEELLLAL 170 Query: 185 RKDHPALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 +DHP H T L + + + G + + + Sbjct: 171 PEDHPLAHAATVTLKDLRTEEFVLPGPGSPLDPVVRRMCAGAGFIPVESTTTDHASVAQA 230 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 + A L +A P + ++P + +W + Sbjct: 231 LVAA--GLGVAFLPAVLAT-ATHPGVTFRSVPGAEMT--------TLSFVWRAESPTTLV 279 Query: 304 IVWL 307 L Sbjct: 280 SAAL 283 >UniRef50_B2JFW9 Transcriptional regulator, LysR family n=39 Tax=Burkholderia RepID=B2JFW9_BURP8 Length = 342 Score = 211 bits (538), Expect = 3e-53, Method: Composition-based stats. Identities = 76/314 (24%), Positives = 125/314 (39%), Gaps = 23/314 (7%) Query: 6 TTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPT 65 +LD+ L+ L+ L+ ERSVT+ A R+N T A+S +L KLR +DP+ V G+ PT Sbjct: 7 ASLDIWLVRVLRTLLVERSVTQTALRLNQTQPAISTALRKLRETLNDPILVRGKSGMVPT 66 Query: 66 PLMVSMEQNLAEWMQMSNLLLDKPHHQTPR--GLKFELAAESPLMMIMLNALSKQIYQRY 123 S+ + ++ + + P F +AA L + + Q + Sbjct: 67 EYGESLLAAAQKVLRDVDFVATPHGDFDPARSRRTFRIAAPDYLNDFFMPTVIAQFRETA 126 Query: 124 PQATIKLRNWDY--DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPC 181 P A +++ + D A+ GE+D+ L + LFSD Sbjct: 127 PHARLEIESLGPLFDHTCALDAGELDLVIGNWPKP----------DLRFERSDLFSDTVV 176 Query: 182 VWLRKDHPALHQTWNLDTFLRYPHISICWEQSDT-WALDNVLQELGRERTIAMSLPEFEQ 240 +R DHP D +L PH++ A+D R I +LP F Sbjct: 177 CMMRADHPLAKAPLTRDAYLAAPHLAPAHYSGARGGAIDTGFARARASRRIVATLPYFGL 236 Query: 241 SLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 + Q D + T R+ +Y + L +V +P+PF + +WH + Sbjct: 237 VPQVLLQSDLI-FTTTRRFALHYAAMLPLAVVDVPIPFPRIKC-------YQMWHPQPDR 288 Query: 301 NPKIVWLRETIKNL 314 I WLR + + Sbjct: 289 PSDIAWLRGLMAQV 302 >UniRef50_C0D3N8 Putative uncharacterized protein n=2 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D3N8_9CLOT Length = 297 Score = 211 bits (538), Expect = 3e-53, Method: Composition-based stats. Identities = 38/311 (12%), Positives = 90/311 (28%), Gaps = 24/311 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +D + + + + +++T+AA++++V+ A+S ++K +F L+ T Sbjct: 1 MDSKQIQYILKVAECQNITRAAEQLHVSQPALSHFISKAEEELGAKIFNRGTTPLTLTQA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + M + L + + L +L + + YP Sbjct: 61 GEHYVKTARMMMALEENLKQEIDDLNNSRDGEIRLGLSDMRATSLLPFALPEFRRLYPNV 120 Query: 127 TIKLRNWDYDSLDA-ITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 TIK +++ + G VD+G + VL+ + + Sbjct: 121 TIKTVESGSRTVEDNVRNGVVDLGIIPLY----------DYGEDLCARVLYDEELLLVSS 170 Query: 186 KDHPALHQTWN----LDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQS 241 +D P ++ + + A+D V E G + M Sbjct: 171 EDLPCERGNVRPWVDIEEVTGRDFALLTGDNRLRRAVDAVFLEHGVKPRTVMESRNNMTV 230 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 + + LA P ++ + + + + Sbjct: 231 YML--ATSGMALAIVPETVVRMMNPVRI------PRIYSIGKSGFHWNIGAIRREDAVLS 282 Query: 302 PKIVWLRETIK 312 L ++ Sbjct: 283 GAQEQLIRLLR 293 >UniRef50_Q1XGL2 Transcriptional activator NahR n=3 Tax=root RepID=Q1XGL2_PSEPU Length = 374 Score = 211 bits (538), Expect = 3e-53, Method: Composition-based stats. Identities = 66/303 (21%), Positives = 109/303 (35%), Gaps = 21/303 (6%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 + LDLNLL+ L+ +R V+ A+ + +T AVS +L +LR DPLFV + G+ Sbjct: 1 MELRDLDLNLLVVFNQLLVDRRVSITAENLGLTQPAVSNALKRLRTSLQDPLFVRTHQGM 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQIY 120 PTP + + + M L P F LA + + L + Sbjct: 61 EPTPYAAHLAEPVTSAMHALRNALQHHESFDPLTSERTFTLAMTDIGEIYFMPRLMDVLA 120 Query: 121 QRYPQATIK-LRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 + P I +R+ + A+ G VD+ +L L + Sbjct: 121 HQAPNCVISTVRDSSMSLMQALQNGTVDLAVGLLP----------NLQTGFFQRRLLQNH 170 Query: 180 PCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFE 239 RKDHP + L+ F Y H+ + + +D + +G R I + +P F Sbjct: 171 YVCLCRKDHPVTREPLTLERFCSYGHVRVIAAGTGHGEVDTYMTRVGIRRDIRLEVPHFA 230 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 + + D L R + L + P+ E + WH + Sbjct: 231 AVGHILQRTDLLA-TVPIRLADCCVEPFGLSALPHPVVLPEIA-------INMFWHAKVP 282 Query: 300 HNP 302 P Sbjct: 283 QGP 285 >UniRef50_Q46P28 Transcriptional regulator, LysR family n=1 Tax=Ralstonia eutropha JMP134 RepID=Q46P28_RALEJ Length = 316 Score = 211 bits (538), Expect = 3e-53, Method: Composition-based stats. Identities = 44/315 (13%), Positives = 101/315 (32%), Gaps = 21/315 (6%) Query: 7 TLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTP 66 + L L + Q RS ++AA+R+ V A+S++++ L LF G+ +P Sbjct: 2 NITLRQLRYFVEIAQSRSFSRAAERLRVAQPALSQNISSLEDSLGAKLFERHARGVEISP 61 Query: 67 LMVSMEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQIYQRYPQ 125 + + + + ++ L D + L+ + ++ L + + YP Sbjct: 62 AGERLLTSAIDILARTDALKDDIDGRASLPTGSVRLSIAGSIAGAVIAPLLGAVAREYPG 121 Query: 126 ATIKLRN-WDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVW- 183 + +R ++S + G+ + S + L+ + ++ Sbjct: 122 IEVTVRESMSFESRALVESGQAHLALMPSPSEI----------QGMASIPLYEERFMLYG 171 Query: 184 LRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 R +T P + ++ +GR + L + + Sbjct: 172 TRAAMRRKPETMTFAEVAELPLAAPDGAHDLRKIIERAANAIGRSLDVRYELNSPQMLIA 231 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 +A D L P + A + + L L+W +P Sbjct: 232 LAR--DGLAYVVMPPSACLEA------VAAKSIVGRPVTEPDLTRIQALVWPGDRPLSPA 283 Query: 304 IVWLRETIKNLYASM 318 +R+ I ++ + Sbjct: 284 AAAIRDLIAHIVGDL 298 >UniRef50_B3PDU8 Transcriptional regulator, LysR family n=1 Tax=Cellvibrio japonicus Ueda107 RepID=B3PDU8_CELJU Length = 313 Score = 211 bits (538), Expect = 3e-53, Method: Composition-based stats. Identities = 46/308 (14%), Positives = 91/308 (29%), Gaps = 23/308 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 + L L + L E + + A R +V+ +S +L KL LF + + TP Sbjct: 1 MTLIELRYITTLADELHIGRTAARCHVSQPTLSIALRKLEEELGVVLFERTKTSIKLTPE 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHH-QTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + + + L + L +L L Q+ Q P+ Sbjct: 61 GAPIIAQARVVLASVADIKSLAEAGRDQLAAPLVLGTLTTLGPYLLPQLIAQLQQWAPEM 120 Query: 127 TIKLRNWDYDSLDA-ITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + ++ +SL + G VD + + LF + V + Sbjct: 121 PLYVQEDTAESLRRKLRDGVVDTVLIPLPFAMP----------EVVTQRLFDEPLVVLVP 170 Query: 186 KDHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 + HP + ++ + P + + + + S+ E + Sbjct: 171 RAHPLACKQIVDIPDIAQEPLLLMAEGHCLRDQALALCPWAALQPETV-SVNSLEMLRNL 229 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 A + ++ P + + A PL + L W I Sbjct: 230 VAA--GMGVSIVPASAAEVSLCRASRVAARPLAI-------GQRTLGLAWRSSFPRYRAI 280 Query: 305 VWLRETIK 312 LR I+ Sbjct: 281 DVLRRAIQ 288 >UniRef50_D0J3K7 Transcriptional regulator, LysR family n=3 Tax=Comamonadaceae RepID=D0J3K7_COMTE Length = 315 Score = 211 bits (538), Expect = 3e-53, Method: Composition-based stats. Identities = 43/273 (15%), Positives = 94/273 (34%), Gaps = 19/273 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L + ++ +V++AA+++ + +S+ L +L LF P G+ T Sbjct: 1 MELRHLRYFVAVAEQGNVSRAARKLFIAQPPLSQQLKQLEDEVGTQLFTRLPRGMQLTAA 60 Query: 68 MVSMEQNLAEWMQMSNLL-LDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 S+ ++ + + L + L M +L L + + + + Sbjct: 61 GESLLEDARVILARAEQAPLRARERERSSQTVLRLGLVPSAMQSLLPGLLRAVAKAGWEV 120 Query: 127 TIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 I+ R A+ +GE+++GF+ L+S+ D C+ + Sbjct: 121 QIEAREMISSQQQRALRQGELELGFARPGHREADELELASI----------DDPYCLAVP 170 Query: 186 KDHPALHQT--WNLDTFLRYPHISICW--EQSDTWALDNVLQELGRERTIAMSLPEFEQS 241 HP + +L + P + + + E G I + Sbjct: 171 SSHPLAGGSGMLDLQAAVHQPFVGFTRYQDTDYFDRTVALCAEAGFTPLIRHEAGQLVNV 230 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVAL 274 + A L +A P +++ Q+ L Sbjct: 231 PALVAC--GLGVAIVPASFAMFHR-EQIVFRPL 260 >UniRef50_C5B901 Transcriptional activator, LysR family n=74 Tax=Proteobacteria RepID=C5B901_EDWI9 Length = 360 Score = 211 bits (538), Expect = 3e-53, Method: Composition-based stats. Identities = 46/318 (14%), Positives = 101/318 (31%), Gaps = 23/318 (7%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 + + L + +M ++T+AA ++ + VS+ LA+ LF L P Sbjct: 50 MHRISLRQVAIFHAVMTSGNLTEAATQLRTSQPTVSRELARFEQLLALKLFDRVRGRLRP 109 Query: 65 TPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGL-KFELAAESPLMMIMLNALSKQIYQRY 123 T + + + + + D ++ +L + ++ + Y Sbjct: 110 TAQGLQLFEEVQRAYCGLERIEDAASQIRQFRRATLDIVCLPAFSQSLLPQVCRRFLECY 169 Query: 124 PQATIKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCV 182 P+ ++ + + L + ++ D+G + S P + L + Sbjct: 170 PEVSLTITPQESPLLEEWLSAQRYDLGLTEE----------CSTPPGCERHALATLNEVC 219 Query: 183 WLRKDHPALHQTW-NLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQS 241 + DHP LH F P+IS+ S LD + Q G R + Sbjct: 220 VMPADHPLLHHAILTPAHFAAQPYISLSAGDSYRHTLDALFQRAGVARRMVAETHSAAAV 279 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 + Q + L+ L + +L+ + + Sbjct: 280 CALVRQ--GIGLSIVNPLTALDFVGRGLAWRPFSVAVP--------FTVSLIRPRHRPGS 329 Query: 302 PKIVWLRETIKNLYASMA 319 + L +++ A++A Sbjct: 330 AVVDALIVSLQEELAAVA 347 >UniRef50_B9Z5T7 Transcriptional regulator, LysR family n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z5T7_9NEIS Length = 310 Score = 211 bits (538), Expect = 3e-53, Method: Composition-based stats. Identities = 50/309 (16%), Positives = 91/309 (29%), Gaps = 22/309 (7%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNS-PLG 61 K++ L L + V+ AA+ +V+ +VS ++A+L A LF G Sbjct: 14 KNMIDFSLRQLEYFVATAEHGGVSAAARARHVSQPSVSLAIAQLEAALGTALFRRQASRG 73 Query: 62 LSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQ 121 + TP + + + + L + L L L Sbjct: 74 VELTPAGLRVLGQARDILA-LAAGLGSGEEPGELRGQLSLICFQDLGPYFAPRLLAGFRA 132 Query: 122 RYPQATIKLRNWDYDSLD-AITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 R+PQ + L D ++ A+ G+ ++ + + + L P Sbjct: 133 RHPQVAVTLLEGDLATVQRALRAGKAELALTYEL----------ATDAQMACRTLAELAP 182 Query: 181 CVWLRKDHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFE 239 L DHP Q +L P + L ++ LG IA ++ FE Sbjct: 183 YALLPGDHPLAAQPAVSLAELAAQPLVL-EDIPHTRDYLLSLFWNLGLTPRIAQTVQSFE 241 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 + A + L+ L P+ + L Sbjct: 242 MQRGLVAHGAGVALSC-------TRPAGDLSYDGTPIACRPLRDDPPPQRVVLARPATAH 294 Query: 300 HNPKIVWLR 308 +P + Sbjct: 295 PSPVVDAFL 303 >UniRef50_B0C4T0 Transcriptional regulator, LysR family n=1 Tax=Acaryochloris marina MBIC11017 RepID=B0C4T0_ACAM1 Length = 307 Score = 211 bits (538), Expect = 3e-53, Method: Composition-based stats. Identities = 63/309 (20%), Positives = 128/309 (41%), Gaps = 24/309 (7%) Query: 15 CLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSP-LGLSPTPLMVSMEQ 73 +L+QE SVT+AA+++N++ SA+S +L +LRA DP+ + + + TP + + Sbjct: 18 AFDILVQEASVTQAAEKLNMSQSAMSHALKRLRAVLKDPILIRTSQRQMEVTPYALEISP 77 Query: 74 NLAEWMQMSNL--LLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQATIKLR 131 + + + L + F +A + + L +Q+ Q+ P I+++ Sbjct: 78 QVRQILAEIQETLLAKDVFNPATAQEDFRIATNDYVEATLSANLLQQLTQQAPGIQIRVK 137 Query: 132 NWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPA 190 + D L A+ +D+ R E L+ + L+ D P Sbjct: 138 GLNKDAVLAALDDNSIDLFIGAGLDLKRWH----------VQESLYQEEFVCVLQSDCPL 187 Query: 191 LHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQPDN 250 +L+ ++ HI + ++ D +L++ + R + S P F F+ A D Sbjct: 188 T--ELSLEQYVERTHILVSFQDDFRGIGDLILEQQQQSRQVVWSTPHFMVVPFLLANSDC 245 Query: 251 LLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWLRET 310 + L R + + L L+ P+ +++WH+R+++ P+ WLR+ Sbjct: 246 VAL-LPKRMAERCAKEMGLKLLPPPIDV-------TRFTVSMIWHQRHNNRPQHQWLRKQ 297 Query: 311 IKNLYASMA 319 +A Sbjct: 298 FLIAAKQLA 306 >UniRef50_A9GGP1 LysR-family transcriptional regulator n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9GGP1_SORC5 Length = 312 Score = 211 bits (538), Expect = 3e-53, Method: Composition-based stats. Identities = 70/316 (22%), Positives = 127/316 (40%), Gaps = 19/316 (6%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 +++ +D+NL++ L L+QERSVT AA+R+ ++ A+S +L +LR F DPL + + Sbjct: 1 MNLSAIDVNLVIALDALLQERSVTLAARRVGLSQPAMSHALTRLRELFSDPLLIRVGRQM 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDK---PHHQTPRGLKFELAAESPLMMIMLNALSKQI 119 + T +M + + L + F +AA + ++++ L+ + Sbjct: 61 ALTSRAEAMTPQVTAIVHDLAGLFGETTPTFDPATSDRAFRIAATEYVELVLMPRLNAAL 120 Query: 120 YQRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 Q P+ + L D ++DA+ GE+D+ LP + LF D Sbjct: 121 AQGGPRLALHLLPLDGRAVDALRSGEIDLAIGVFPQES--------LPPDLRRAPLFDDR 172 Query: 180 PCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFE 239 R HP +L T+ PH+ + + D+++ G R AM++P Sbjct: 173 FAGLARMSHPTARGQVDLQTYAALPHVVVPRRGAHDGVADDLIAARGIARHEAMTVPHVL 232 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 D + A R + ++ L L LP + W+ R Sbjct: 233 LVPHAITASDLVA-TVATRLGRAFSSLVPLRTFDLPFELPPI-------EIAMAWNSRTE 284 Query: 300 HNPKIVWLRETIKNLY 315 +P WLR + + Sbjct: 285 RDPARAWLRGVVTDTA 300 >UniRef50_A7IIH2 Transcriptional regulator, LysR family n=1 Tax=Xanthobacter autotrophicus Py2 RepID=A7IIH2_XANP2 Length = 320 Score = 211 bits (538), Expect = 4e-53, Method: Composition-based stats. Identities = 49/314 (15%), Positives = 99/314 (31%), Gaps = 22/314 (7%) Query: 7 TLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSP-LGLSPT 65 + L L + +VT+AA+++NV+ ++S ++A+ A LFV G+S T Sbjct: 2 NVSLRALRYVVAAADCGNVTEAARQLNVSQPSISAAIAQTEADLKLQLFVRHHARGISLT 61 Query: 66 PLMVSMEQNLAEWMQMSNLLLDKPHHQ-TPRGLKFELAAESPLMMIMLNALSKQIYQRYP 124 + + + L + + AL + + P Sbjct: 62 SAGQRYVNEARHLLAHARDFAQTAEALGDSLRGEIALGCFLTIAPRFMPALLARFAEVQP 121 Query: 125 QATIKLRNWD-YDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVW 183 T+KL D + LD + G ++I S ++P + E+L P + Sbjct: 122 GITVKLEEGDQREILDGLLSGRLEIAVSYGY----------AVPEELSGELLIDLPPLLV 171 Query: 184 LRKDHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 + DHP ++ +L P + ++ G IA +E Sbjct: 172 VAADHPLAGKSVVSLQDVADEPFLLYDLPH-TRDYFFSLFDAAGITPRIAYRSRSYELIR 230 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 + Q + + PL K + + +R P Sbjct: 231 GLVGQKRGY--TLHNASPRTTMAYDGSRVAVRPLKERLPPVKVMRLTL-----RRQPMRP 283 Query: 303 KIVWLRETIKNLYA 316 + + + ++ Sbjct: 284 AVEVFARFLSDAFS 297 >UniRef50_P52661 HTH-type transcriptional regulator gbpR n=1 Tax=Azospirillum brasilense RepID=GBPR_AZOBR Length = 342 Score = 210 bits (537), Expect = 4e-53, Method: Composition-based stats. Identities = 47/303 (15%), Positives = 95/303 (31%), Gaps = 21/303 (6%) Query: 6 TTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPT 65 L L L L + R++ +AA + ++ A SK L L LF G+ P Sbjct: 14 ARLKLRHLQLFVALDEHRNLHRAAASLTMSQPAASKLLGDLEESLGVTLFERHGRGVEPN 73 Query: 66 PLMVSMEQNLAEWMQMSNLLLDKPHH-QTPRGLKFELAAESPLMMIMLNALSKQIYQRYP 124 M ++ + ++ + + + ++ + + + +P Sbjct: 74 WYGGLMIRHARTILSGLQEAGEELNDLLAGHSGSVSIGTVMAPAVELVVPVITTLTRDHP 133 Query: 125 QATIKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVW 183 I + D L + + +G +D H + DY+ + S+ C Sbjct: 134 DLKIAVAVETSDVLAERVRQGVMDFAIGRLPDHVDASC--------FDYQEISSEELCFV 185 Query: 184 LRKDHPALH--QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGR-ERTIAMSLPEFEQ 240 R HP L + + I ++ + + G + Sbjct: 186 CRDGHPLLRLGRPLTAADLVDATWILQPLGSLLRSRVEALFRAEGVPPPRKVIESASPVI 245 Query: 241 SLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 SL M A+ D++ + A Q ++ +V F P+ + W K Sbjct: 246 SLAMVAENDSVTV-FARALAQVFSPTGSCTIVPFHKRFSVE-------PYGIFWLKDRPL 297 Query: 301 NPK 303 +P Sbjct: 298 SPG 300 >UniRef50_B7RV59 LysR substrate binding domain protein n=1 Tax=marine gamma proteobacterium HTCC2148 RepID=B7RV59_9GAMM Length = 292 Score = 210 bits (537), Expect = 4e-53, Method: Composition-based stats. Identities = 36/303 (11%), Positives = 90/303 (29%), Gaps = 33/303 (10%) Query: 13 LLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSME 72 + ++ + S +AA ++ + AV+ S+ +L ++ LF + ++PT Sbjct: 1 MRAFVVVARHGSFNRAADELSRSQPAVTLSIKQLESYVGLKLFERTTRKVTPTTAGEKFI 60 Query: 73 QNLAEWMQMSNLLLDKPHH-QTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQATIKLR 131 ++ ++ + R ++ + +L + + +++P +I + Sbjct: 61 PVAERLLREFDMAIYDVTATADCRSGHVSMSVLPSVATRILPDVISEFTEKFPDISIHVS 120 Query: 132 NWDYDSLDA-ITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPA 190 +++ + + R EVD G +++ L D + KDHP Sbjct: 121 DYNAQGVQRSVERNEVDFGIGSLWHPNSK----------LEFRPLMEDRFELVCHKDHPL 170 Query: 191 L--HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQP 248 + +S L L+ M Sbjct: 171 AAEGAPVTWEQLKGLSFLSTG--------LTQALKMQRYIGNPKFEFTTTNTLFAMLKAN 222 Query: 249 DNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWLR 308 + + P L +LP ++ + + +P + Sbjct: 223 --VGVTVLPTLAMPQED----DLRSLP-----MVDPVETREICVILRQDWTLSPAANAMM 271 Query: 309 ETI 311 E + Sbjct: 272 EVL 274 >UniRef50_Q1D8H0 Transcriptional regulator, LysR family n=2 Tax=Cystobacterineae RepID=Q1D8H0_MYXXD Length = 294 Score = 210 bits (537), Expect = 4e-53, Method: Composition-based stats. Identities = 37/308 (12%), Positives = 83/308 (26%), Gaps = 25/308 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L + +AA+R++V+ +S+ + +L PLF + G+ T Sbjct: 1 MELRHLRYFSAVADTLHFGRAARRVHVSQPTLSQQIRQLEEELGAPLFERARSGVRLTQA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + ++ + + + ++L + +R+ Sbjct: 61 GELFRTYASRALEDVDAGRVAVGALRGLTTGALRVGYPPSMRGVVLP-ALAAVLRRHSGL 119 Query: 127 TIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + + G +D+G + ++ E +F + + Sbjct: 120 VLSAEEAVVRRVERRLADGRLDVGLGYAPARSP----------DLEAEPVFDSKLALVVA 169 Query: 186 KDHPALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 K HP +T + P + +D + +A+ L Sbjct: 170 KGHPLAKLETVGAKPLAQEPFALLSRGLRVRARVDAWFAAIRIAPHVALESNAVATVLAT 229 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 L + P L + L LLW K P Sbjct: 230 VRA--GLAVTVLPEP--QLADAAGLAVKRLSPAPRAELA-------ALLWRKGAPRTPAA 278 Query: 305 VWLRETIK 312 ++ Sbjct: 279 ELFAAEVR 286 >UniRef50_B7VQV6 Transcriptional regulator n=10 Tax=Vibrionales RepID=B7VQV6_VIBSL Length = 315 Score = 210 bits (537), Expect = 4e-53, Method: Composition-based stats. Identities = 67/307 (21%), Positives = 127/307 (41%), Gaps = 20/307 (6%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 + ++LNLL L +L++E V++ A+R+++T SAVS+ LA+LR DPL V L P Sbjct: 2 LGNINLNLLRSLHVLLEECHVSRTAQRLHITQSAVSRQLAQLRDLCGDPLLVRDGNKLVP 61 Query: 65 TPLMVSMEQNLAEWMQMSNLLLDK-PHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRY 123 T + ++ L + + + LLD P + LA+ + +L + ++ + Sbjct: 62 TNRALLLKGKLDDLLGEFDHLLDDKPFDPQDWQGELVLASSDYVAQYILPIIVSEVSKDA 121 Query: 124 PQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVW 183 P + R W + L+ + + + + P + L D Sbjct: 122 PHINLAYRLWQPNFLETLNESGIHLA----------SSMFPKKPDHVSSIKLGEDKSVCL 171 Query: 184 LRKDHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 +R HP Q+ + + + Y HI + D L++ G +R IA+ +P F + Sbjct: 172 MRASHPLAKQSAISSEDIVNYSHIKVTGGGDKDSYSDIALKKQGHKRRIALQVPFFSSAG 231 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 + Q D L++ + + +LP + + L+WH + ++ Sbjct: 232 NVLMQDDYLMI-VPEHIAYNLGRHLDVAYFSLPFETEMH-------TYWLMWHPKYDNDS 283 Query: 303 KIVWLRE 309 W RE Sbjct: 284 AHKWARE 290 >UniRef50_Q6FDZ3 Putative transcriptional regulator n=1 Tax=Acinetobacter sp. ADP1 RepID=Q6FDZ3_ACIAD Length = 307 Score = 210 bits (537), Expect = 4e-53, Method: Composition-based stats. Identities = 45/313 (14%), Positives = 109/313 (34%), Gaps = 26/313 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +D++ L +++E ++++AA R+++ +++ + L + L P G+ T Sbjct: 2 IDIHKLNAFVAVVEESNISRAANRLHMQQPPLTRLIQSLEQDLNTTLLKRLPRGVEVTEA 61 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQT-PRGLKFELAAESPLMMI-MLNALSKQIYQRYPQ 125 + Q + ++ + + + + + + + + L L + +++P Sbjct: 62 GKVLYQEAVTILAHASSIPQRVQNIAQGKEGQINIGFTHSIGLHPFLPTLLRHFREKFPA 121 Query: 126 ATIKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 +I L +L DA+ ++DI F + + A+ + ++ V L Sbjct: 122 VSIHLEEDSSSALTDAVINEKLDIVFLRKPAPK---------HTAVQTMHVLNETLIVAL 172 Query: 185 RKDHPAL--HQTWNLDTFLRYPHISICW--EQSDTWALDNVLQELGRERTIAMSLPEFEQ 240 +HP +L Y + Q + + G I P Sbjct: 173 PSNHPLAMQQGAIHLPDLEPYEFVLYRRLAGQDLFDNILANCYQAGFSPNIVQEAPRLTS 232 Query: 241 SLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 SL + A + L+ P Q + ++ PL + P ++ + Sbjct: 233 SLNLIAA--GIGLSIVPASIQDFWNK---QIIYRPLEAKKPCIA----PIYAIYSA-KDN 282 Query: 301 NPKIVWLRETIKN 313 N ++ +K Sbjct: 283 NIRVAHFLNLLKA 295 >UniRef50_C3JX55 HTH-type transcriptional regulator CynR n=2 Tax=Rhodococcus erythropolis RepID=C3JX55_RHOER Length = 291 Score = 210 bits (537), Expect = 4e-53, Method: Composition-based stats. Identities = 39/312 (12%), Positives = 97/312 (31%), Gaps = 23/312 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L + + ++R ++AA R++V+ SA+S + L LF + + T Sbjct: 1 MELRHIRYALAVAEDRHFSRAASRLHVSQSALSAQIRDLEKELGVELFNRNSRNVGLTAA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQAT 127 E + + L+ ++ ++ + + + + + +R+P Sbjct: 61 GEVFVARSREVLGAVSRLVSDVSARSNEQVRLTVGTITSAGRVDVGRALADLTRRHPAIN 120 Query: 128 IKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRK 186 I R + + + + + G +D+G G LP + L+S+ ++ Sbjct: 121 ITARPYGSEVVIEGVRSGAIDVGIVGL--------AAGRLPKSFAAAPLWSEPTAAFVAP 172 Query: 187 DHPALHQ-TWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMA 245 DHP + L+ + + D E R + + + Sbjct: 173 DHPFAQASSIRLEDLRDHTLVDFASGSEARVQTDQAFAESQVPRGKTLEANSVDLICSLT 232 Query: 246 AQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIV 305 A + L + L + + + + + Sbjct: 233 ANGLGVGLLPQSMSALHSE----LACIPI--------TDAPHRIVHAIT-EPTHSSALAR 279 Query: 306 WLRETIKNLYAS 317 E + +A+ Sbjct: 280 EFVELLAAQFAT 291 >UniRef50_UPI0001693B14 transcriptional regulator, LysR family protein n=1 Tax=Xanthomonas oryzae pv. oryzicola BLS256 RepID=UPI0001693B14 Length = 299 Score = 210 bits (537), Expect = 4e-53, Method: Composition-based stats. Identities = 48/317 (15%), Positives = 99/317 (31%), Gaps = 21/317 (6%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 L L L S T+AA+++ V+ ++S+ + L A PLF + Sbjct: 1 MPRPKTTLRQLSYFVALADTGSFTRAAEQMGVSQPSLSQQIRALEAIIGAPLFERGAQAI 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLD-KPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQ 121 TPL + + L + + L L ++ +L ++++ Sbjct: 61 -LTPLGRDLLDRARSILLDVTDLEEVRATAADTLVGTIRLGVSPTLGAYLMPSLVARLHR 119 Query: 122 RYPQATIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 +P + +R ++ G D+ + R + E LF ++ Sbjct: 120 AHPALRVHVREGLPTALAAGLSSGLHDLVLAQLPVPGR----------GLHSERLFRELL 169 Query: 181 CVWLRKDHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFE 239 V + DHP + L +++ E + + E+G + Sbjct: 170 HVTMAADHPLRTKACITLADLRGANLLTLMPEYRLAEQVAAIALEVGANVLRDYEGTSLD 229 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 M + LA P + +V P+ + + LLW + Sbjct: 230 AIRQM--AGMGMGLALLPDLYVHQEIREGDDVVVRPV-----KGGRYYREIGLLWREGAG 282 Query: 300 HNPKIVWLRETIKNLYA 316 P + ++ + A Sbjct: 283 RAPAFGLIANLLRAVAA 299 >UniRef50_Q1LFI3 Transcriptional regulator, LysR family n=1 Tax=Cupriavidus metallidurans CH34 RepID=Q1LFI3_RALME Length = 311 Score = 210 bits (537), Expect = 5e-53, Method: Composition-based stats. Identities = 52/314 (16%), Positives = 113/314 (35%), Gaps = 22/314 (7%) Query: 7 TLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTP 66 L +++ + RS + A++ I++T SAVSK ++ A LF S ++PT Sbjct: 14 NFTLREFRVFRVVYELRSFSGASQTIHMTQSAVSKVCQEMEAKVGQRLFERSTRKVTPTQ 73 Query: 67 LMVSMEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNALSKQIYQRYPQ 125 L + ++ E + + + +A+ + + +L ++ +P Sbjct: 74 LAHQLYGHVCEVLGTMDAAERSMQSLLNLEAGEVSVASSPMMCVGLLRGAVSAFHEAHPA 133 Query: 126 ATIKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 I + D +++ + G+ D G + + E L+++ V Sbjct: 134 IRIGMHELSTDETIEYVVNGKADFGLVS----------MEEAHPKLSIEHLYNESMFVIC 183 Query: 185 RKDHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 DH + + + YP IS+ S +D V + ++ + ++ Sbjct: 184 AGDHELARKRKVSWELLADYPQISLHSTFSTRRTIDRVFASRHLAYSTSVEVGTVLSAIS 243 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 A L + P Y + + L ALP +E P +L+ + Sbjct: 244 FAKA--RLGVTVLPGYVREFVSELGLVARALPCE-------GVEHPISLITRWNARLSTP 294 Query: 304 IVWLRETIKNLYAS 317 L ++++ A+ Sbjct: 295 AECLLDSVRKRLAA 308 >UniRef50_B5XR29 Transcriptional regulator, LysR family n=2 Tax=Klebsiella RepID=B5XR29_KLEP3 Length = 306 Score = 210 bits (537), Expect = 5e-53, Method: Composition-based stats. Identities = 46/311 (14%), Positives = 105/311 (33%), Gaps = 27/311 (8%) Query: 9 DLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLM 68 LN L+ + + ++ KAA ++N++ +S+ +A+L LF + G+S T Sbjct: 4 TLNQLINFCTVAETGNIGKAASQLNISQPPLSRQIAQLETILGAKLFNRAAKGVSLTLAG 63 Query: 69 VSMEQNLAEWMQMSNLLLDKPHHQT-PRGLKFELAAESPLMMIMLNALSKQIYQRYPQAT 127 + + M + + +L A ++ ++ Q Sbjct: 64 EQFLLDCRAMLAMLEQACNNVRAIASGQKGVLKLGATMYASYSVVPHVAMQHRNTCSDVE 123 Query: 128 IKLRN-WDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRK 186 + + D A+ G +D S E+ I VL + L Sbjct: 124 LHFQERVPSDLHAALQDGRLDAAISFSETATP----------GIHSLVLLREPLIAALPA 173 Query: 187 DHPALH-QTWNLDTFLRYPHISICWEQS--DTWALDNVLQELGRERTIAMSLPEFEQSLF 243 +HP + + + L++ P I++ E + ++ + + G I + + + Sbjct: 174 NHPQVQHEHFRLESLCDDPFITVPRESAPMLYDSILHQCLKAGFSPQIGLEASVQQTVMN 233 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 A + +A P + +V L + L+W +N++ P Sbjct: 234 FVAH--GVGVALIPASMENAQLRG---VVYRKLENPNMVENM------LMWSAKNTN-PA 281 Query: 304 IVWLRETIKNL 314 + +++ Sbjct: 282 LPGFVNLCRSI 292 >UniRef50_A8II36 Putative transcriptional regulator n=1 Tax=Azorhizobium caulinodans ORS 571 RepID=A8II36_AZOC5 Length = 305 Score = 210 bits (536), Expect = 5e-53, Method: Composition-based stats. Identities = 38/314 (12%), Positives = 99/314 (31%), Gaps = 22/314 (7%) Query: 7 TLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTP 66 +D L + + S +AA +N++ +A+S + KL L + S ++ TP Sbjct: 2 RIDFLGLQAFIAIAERGSFLRAAAHLNLSQTALSHRMKKLEDDLGVRLLIRSTRVVTLTP 61 Query: 67 LMVSMEQNLAEWMQMSNLLLDKPHHQT-PRGLKFELAAESPLMMIMLNALSKQIYQRYPQ 125 ++ + + ++ + + + L + L + +P Sbjct: 62 DGEALLPKAKQALAGLAAEVEALREKALGQETRVALGCLPTIATSHLPHVLLDFEAAHPG 121 Query: 126 ATIKLRNWDYDSLDAI-TRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 +K+ + + + G G ++++ ++ L + + Sbjct: 122 VAVKIYDNSASEIAGLVRSGAAAFGIG----------IVTAAMWDLEMTPLRKEPFLLLC 171 Query: 185 RKDHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 + H + + P I I + + +D+ L + + ++ Sbjct: 172 PQSHAFADKRAVSWGELEGVPLIRISPQAGNRALIDDALGSRREALNWRYEVQHVQTAVS 231 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 M + L P++ + + L LV L + + + + +P Sbjct: 232 MVQA--GIGLTIVPKFAMERSAIPGLRLVTL-------RNPSITRTLVVFTKRGVPLSPV 282 Query: 304 IVWLRETIKNLYAS 317 L E ++ A Sbjct: 283 ARDLLELVRARIAG 296 >UniRef50_A3VWI6 Transcriptional regulatory protein n=1 Tax=Roseovarius sp. 217 RepID=A3VWI6_9RHOB Length = 314 Score = 210 bits (536), Expect = 5e-53, Method: Composition-based stats. Identities = 65/311 (20%), Positives = 130/311 (41%), Gaps = 21/311 (6%) Query: 9 DLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLM 68 DLNLL ++M ER++T+AA R+N+T +VS ++ +LR D LF+ G+ PT Sbjct: 8 DLNLLRIFHVVMLERNMTRAAARLNMTQPSVSNAIQRLREVLADDLFIKVSGGVVPTAKA 67 Query: 69 VSMEQNLAEWMQMSNLLLD-KPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQAT 127 ++ + +Q +D + + F +A + ++ ++ ++ P + Sbjct: 68 EAIWPTIRNSIQSLIQTIDPERFEPSVATDSFRIAMSDFVATQLILPVAGPLFNAAPHVS 127 Query: 128 IKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRK 186 + L D + + G+ D+ ++ I +L + +RK Sbjct: 128 LVLCQNSVDNIVPGLIDGQFDMA----------AGVIPYKEARIRSILLKTLTYVCAMRK 177 Query: 187 DHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAA 246 DHP + F+ H+ + + +D L + G R IA+++ + + + + Sbjct: 178 DHPLAKEPLTFADFMAARHLQVSL-SGRSGFIDRYLTDRGMFRDIALTIRHYTLAPEILS 236 Query: 247 QPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVW 306 D + + + +Q L A P+P E +LLWH+RN P W Sbjct: 237 STDLIAI-LPSEVISHSHQYDLLKTTAPPIPVYED-------SISLLWHERNDAMPAHRW 288 Query: 307 LRETIKNLYAS 317 +RE + ++ + Sbjct: 289 MRERLIDIVKA 299 >UniRef50_B8IWD6 Transcriptional regulator, LysR family n=1 Tax=Methylobacterium nodulans ORS 2060 RepID=B8IWD6_METNO Length = 304 Score = 210 bits (536), Expect = 5e-53, Method: Composition-based stats. Identities = 48/318 (15%), Positives = 103/318 (32%), Gaps = 20/318 (6%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 + L LL L L + RS+ KAA +N+T +K L L LF G+ P Sbjct: 2 LRRLKSRQLLLLIALSEARSLRKAAAALNMTQPTATKLLQNLENNVGLALFERGRRGMQP 61 Query: 65 TPLMVSMEQNLAEWMQMSNLLLDKPHHQ-TPRGLKFELAAESPLMMIMLNALSKQIYQRY 123 T + ++ + N + + + + A + ++L ++ Q++ Sbjct: 62 TIYGEVIIRHARLVLADLNRTRLELQSLSSGGTGRIRIGAVISAIPVLLARAVARLKQQH 121 Query: 124 PQATIKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCV 182 ++ + D + A+ +GE+D+ + +YE L + + Sbjct: 122 SGLSVTIDVGTSDALVPALAKGELDVLLARPLVLADR--------PEFNYEELTEEPIQI 173 Query: 183 WLRKDHPALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGR-ERTIAMSLPEFEQ 240 R H + L + L+ + ++G E + Sbjct: 174 VARAGHALAASERLRLGDLAGSAWTLLPPGTPMRKVLEPIFAQIGPGEPRNVVETSSIMT 233 Query: 241 SLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 + + + + L + P +N H L L LP+ + ++ + Sbjct: 234 MIALLQESEMLAV--MPADVTNFNTRHGL-LCRLPISLPPIMG-----SYGIVTRRDRPL 285 Query: 301 NPKIVWLRETIKNLYASM 318 +P + +K Sbjct: 286 SPSTTTFLQHLKATMQRF 303 >UniRef50_A9ANF4 LysR family transcriptional regulator n=8 Tax=Proteobacteria RepID=A9ANF4_BURM1 Length = 296 Score = 210 bits (536), Expect = 5e-53, Method: Composition-based stats. Identities = 45/314 (14%), Positives = 97/314 (30%), Gaps = 25/314 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +D+ +L +L E +AA R++++ +S+ + L LFV S + T Sbjct: 1 MDMRVLRYFAVLADELHFGRAAARLHISQPPLSQQIRLLEEQLGTALFVRSQHRVELTEA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPH-HQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 ++++ + + + +D + + S M+ + + +R+P Sbjct: 61 GKTLKEQVPLIVAQFDRAIDLTRCAGRGEKGRVAVGIISSAMVAPIPRALRVFAERHPHV 120 Query: 127 TIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 L +DA+ +D+ F + I EV+ + L Sbjct: 121 QWSLHEMTPAAQIDALKEKRLDVCFFRLFQDDPA----------IRSEVVVRETAVAALP 170 Query: 186 KDHPAL-HQTWNLDTFLRYPHISIC-WEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 DH L +S L + I + E L Sbjct: 171 LDHRLASRDAIALGELANEHFVSFGLRHSQLARFLQQCCVDARFTPRIEHEVVEVHTLLS 230 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 + + L +A P + + + F +LEV + + Sbjct: 231 LVRE--GLGVALLPASARQISTGG--------VSFVPLLAPELEVSLQARYRAD-DTSAV 279 Query: 304 IVWLRETIKNLYAS 317 + +T++ + A Sbjct: 280 LGAFLDTVREVAAE 293 >UniRef50_C6XPR6 Transcriptional regulator, LysR family n=1 Tax=Hirschia baltica ATCC 49814 RepID=C6XPR6_HIRBI Length = 302 Score = 210 bits (536), Expect = 6e-53, Method: Composition-based stats. Identities = 40/301 (13%), Positives = 95/301 (31%), Gaps = 22/301 (7%) Query: 6 TTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPT 65 ++L L + + ++AA+ NV+ +S + KL +F + + PT Sbjct: 3 RVMNLRDLEYVVAVANLTHFSRAAEYCNVSQPTLSLQIKKLEDELGVAIFERTNKQVFPT 62 Query: 66 PLMVSMEQNLAEWMQMSNLLLDKPH-HQTPRGLKFELAAESPLMMIMLNALSKQIYQRYP 124 + + Q+ + + + + + Q P F L A L + +L + + P Sbjct: 63 EAGLKIVQHARKILADTAQIKEIAKTAQDPFSGTFRLGAFPTLASYLFPSLVPILSKIMP 122 Query: 125 QATIKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVW 183 + + L D+L + + +G++D F + +F+D + Sbjct: 123 LSRLVLLEEKSDTLKEMLKQGQIDATFLALPFEE----------DGFFVQHVFNDPFLIA 172 Query: 184 LRKDHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 + + H ++ + L + + ++ Q +G E Sbjct: 173 VAQSHKLANRKSIDKSALLSERLLLLEEGHCLRDQALDLCQIMGSTNEPDFRATSLETLR 232 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 M + P N+ + + ++ L+ K + P Sbjct: 233 QMVRANSG--ITIMPEIAINENKPDGISYIPF-------AEQVPFRSIVLVCRKSCARKP 283 Query: 303 K 303 Sbjct: 284 V 284 >UniRef50_P52670 HTH-type transcriptional regulator ilvR n=98 Tax=Bacteria RepID=ILVR_CAUCR Length = 296 Score = 210 bits (536), Expect = 6e-53, Method: Composition-based stats. Identities = 49/310 (15%), Positives = 101/310 (32%), Gaps = 24/310 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +D+ + + +AA+R+ +T +S+S+ L PLF + + T L Sbjct: 1 MDIRQFRHFAAVAETLHFGRAAERLGITQPPLSQSIQALEKALGAPLFARTKRHVELTAL 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQ-TPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 ++ E + + L D + L+ S +L L ++ + +P Sbjct: 61 GRQWLPHVLEALAAVDALPDTARRLRDGQTGYLSLSFVSTADYSVLPDLVRRYAEAFPGV 120 Query: 127 TIKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 I+L D + AI GE G + SLP A+ Y L S+ Sbjct: 121 EIQLVEATSDVQVPAIQAGERHAGIIIPPPN-------RSLPAALAYRRLVSEPLVAVTP 173 Query: 186 KDHPALHQTWNLDTFLRYPHISICWE--QSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 + +L P + + + + G+ I + + + Sbjct: 174 EAW-GAEGPLDLAALADVPLVLFPRTVAPAFHDLVTGYVAARGQPVRIVQEAIQMQTIIS 232 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 + + L +A AP + + + + + L + L+W + P Sbjct: 233 LVSA--GLGMALAPASLRKLAR---VGVRYVDLVDPPI------LETGLVWRRD-EAAPT 280 Query: 304 IVWLRETIKN 313 + L + Sbjct: 281 LQGLLRLVTE 290 >UniRef50_B7CP85 Transcriptional regulator, LysR family protein n=1 Tax=Burkholderia pseudomallei 576 RepID=B7CP85_BURPS Length = 305 Score = 210 bits (535), Expect = 7e-53, Method: Composition-based stats. Identities = 73/320 (22%), Positives = 131/320 (40%), Gaps = 21/320 (6%) Query: 1 MKK-SITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSP 59 M I DLNLLL +L++ER V+KAA R +++ A+S+ L +LR F D L V + Sbjct: 1 MHMKHIRGADLNLLLAAFVLLEERQVSKAADRYHLSQPAMSRMLQRLRDTFGDELLVRTR 60 Query: 60 LGLSPTPLMVSMEQNLAEWMQMSNLLLD-KPHHQTPRGLKFELAAESPLMMIMLNALSKQ 118 G PT + L E + + LL T F +A I+ L ++ Sbjct: 61 GGFEPTVRGRYILHELGELLPRLDALLRGGLFDPTEAEDTFRVACTDYATTILGPRLFER 120 Query: 119 IYQRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSD 178 +++ P ++ + W + +AI G +D+ + +P + E LF D Sbjct: 121 VFREAPNVSMDVVAWHDHAFEAIEHGRLDLVL-----------WPNEVPDTLYSETLFED 169 Query: 179 VPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEF 238 + DHP+ L +LR+PH + ++ L ++G R + + F Sbjct: 170 DFVCMMSSDHPSGDGPLVLRDYLRFPHAVVSVLGGKQTIVEQRLHDMGVRRAAGLRVSYF 229 Query: 239 EQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRN 298 ++ A+ + R Y + +V P ++ + ++WH R Sbjct: 230 SGAITAIARTALIA-TVPRRLAMLYRDRANIRIVEAP-------AMFGKLSYKMVWHPRA 281 Query: 299 SHNPKIVWLRETIKNLYASM 318 + + WLR+TI+ + Sbjct: 282 DGDLALQWLRQTIRAAANDI 301 >UniRef50_B0TM59 Transcriptional regulator, LysR family n=2 Tax=Shewanella RepID=B0TM59_SHEHH Length = 308 Score = 210 bits (535), Expect = 7e-53, Method: Composition-based stats. Identities = 38/317 (11%), Positives = 98/317 (30%), Gaps = 23/317 (7%) Query: 6 TTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPT 65 + + + + + M +VT AA+ + ++ AVS+ L++L PLF+ + L T Sbjct: 5 SKIKIRQIEAFRCFMLSGTVTGAAELLYISQPAVSRLLSELEYRVGFPLFIRTHNKLEAT 64 Query: 66 PLMVSMEQNLAEWMQMSNLLLDKPHHQTP-RGLKFELAAESPLMMIMLNALSKQIYQRYP 124 P +++ N L + + + + +P Sbjct: 65 PEAKLFYKDVNRVFVGMNSLTSSADAIARNNQGRLRIGVMPICSNSFMPDVIAAFLSLHP 124 Query: 125 QATIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVW 183 +I+L + L+ + +DI + L V Sbjct: 125 NVSIELESASRIQLLEMVRSHRIDIAITTNVEADE---------DEFSCRFLRRHRAVVL 175 Query: 184 LRKDHPALHQ-TWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 L + HP + + + +++ + +++ + +R I + E Sbjct: 176 LHEGHPLAQKSSLSPIDLKHERFMTLAYGSPFRTRVEDAFLKQSVKRNIILEAREQSTLF 235 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 + + + +A + + +V+ P E + ++ K Sbjct: 236 QLVRK--GVGIAILDPFVLHSGADG---IVSRPFE------PVTEWEYHVVQAKGIQTPR 284 Query: 303 KIVWLRETIKNLYASMA 319 + + + + S + Sbjct: 285 MVNAFLDILFEYFESPS 301 >UniRef50_Q13AV2 LysR, substrate-binding n=2 Tax=Alphaproteobacteria RepID=Q13AV2_RHOPS Length = 319 Score = 210 bits (535), Expect = 7e-53, Method: Composition-based stats. Identities = 47/318 (14%), Positives = 92/318 (28%), Gaps = 22/318 (6%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 + L L L + + + R T+AA+ +++T AVS L +L LF + Sbjct: 2 MARMHLTLQQLRLFEAVSRHRHFTRAAEELHLTQPAVSIQLRRLEENVGAKLFEHIGKRF 61 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQ-TPRGLKFELAAESPLMMIMLNALSKQIYQ 121 TP M+ + + +L L+ + L L Sbjct: 62 FLTPAGHEMQAACNDILGRLQVLEQSLDSLDDTLKGPLRLSVVTST-KYFLPHLLGSFIV 120 Query: 122 RYPQATIKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 +P +L + + ++ + D G+ + ++ + ++ Sbjct: 121 DHPAVLPRLIVTNRERVIERLVENLDDFVIMGQAPDDLA----------VEAHPFYENLI 170 Query: 181 CVWLRKDHPALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFE 239 V HP ++ R + A D L E T M L E Sbjct: 171 VVAAHTQHPLSAVRSIPPLQIARERWLVREAGSGTRSAFDRYLIENDLAITPYMELGSTE 230 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 L ++ P + L + Q L + +W K + Sbjct: 231 AIKQGVMA--GLGVSVLPISSMQLELTNGC------LAVLDVQGFPLCRRWNAVWLKGKT 282 Query: 300 HNPKIVWLRETIKNLYAS 317 +P + + +S Sbjct: 283 LSPVARAFVDFLLAGASS 300 >UniRef50_Q07RX2 Transcriptional regulator, LysR family n=14 Tax=Bradyrhizobiaceae RepID=Q07RX2_RHOP5 Length = 322 Score = 210 bits (535), Expect = 7e-53, Method: Composition-based stats. Identities = 40/314 (12%), Positives = 93/314 (29%), Gaps = 22/314 (7%) Query: 1 MKKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPL 60 M K T+ + L L L S+T AA ++++T AV+ L L+ PL + Sbjct: 1 MAKQFRTVSIRQLRALAALSANGSITAAANKLHLTQPAVTLQLRNLQDIAGLPLIQRTSD 60 Query: 61 GLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNALSKQI 119 G+ T + + + + A S + Sbjct: 61 GMLLTDAGREVLALSERIEAAIAACETSLDMIAGKTAGRISIGAVST-AKYFVPFAISAF 119 Query: 120 YQRYPQATIKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSD 178 + +P+ I+L + + +A+ E+DI GR + + + ++ Sbjct: 120 QKLHPKVDIRLSIGNRQEIGNALRNYELDIAIMGRPP----------VDMEMAVHLIGDH 169 Query: 179 VPCVWLRKDHPALHQ-TWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPE 237 + H + + ++ ++ + + G +I M + Sbjct: 170 PHVIIAPTAHRLARKLRLPVTELAGETFLTREPGSGTRSLMEQLFESAGIRPSIGMEMSS 229 Query: 238 FEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKR 297 E + +A ++ + L + LP + ++ Sbjct: 230 NETIKQAVIAGLGIAFISAHTVATELDERRLVILDVVGLPVI--------RQWFVVSRTD 281 Query: 298 NSHNPKIVWLRETI 311 P + + + Sbjct: 282 KVLLPPAQAMLDFL 295 >UniRef50_A9IN12 Transcriptional regulator, LysR-family n=1 Tax=Bordetella petrii DSM 12804 RepID=A9IN12_BORPD Length = 337 Score = 210 bits (535), Expect = 7e-53, Method: Composition-based stats. Identities = 37/313 (11%), Positives = 94/313 (30%), Gaps = 20/313 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +D L ++ S+T AA+ +++ SA+S+ + L L S G+ TP Sbjct: 25 MDSRQLRYFVKTLEVGSLTHAAQALHIAQSALSRHMRNLEDELGVRLLTRSKQGVEATPQ 84 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + ++ ++ + + L + + I++ L + + Q P+ Sbjct: 85 GALLLEHGRNILRQFEQARQEIMSLGAEPFGEVVLGIPATVSPILIRPLLEAVGQAMPKV 144 Query: 127 TIKLRN-WDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 +++ L+ + G +DI ++ V+ + + Sbjct: 145 ALRIIEGMSGHLLEWLHSGRLDIAVLFDVMPKA----------GLNTSVIGQEPIYLVGA 194 Query: 186 KDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMA 245 L YP I+ + + + + I + + F + + + Sbjct: 195 AGKFKADAEVPLRELGNYPLITPGAKHGISMLIRQAAARENVDLQIRVEVDAFAEMIDLV 254 Query: 246 AQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIV 305 Q L R + + + + K +P Sbjct: 255 RQ--GLGYTMLARMGFHRELKAG------KVSLAHIVDPPILRTLVIATPKARPQSPATQ 306 Query: 306 WLRETIKNLYASM 318 ++ ++ L + Sbjct: 307 FVIDSTIRLLQAF 319 >UniRef50_A0JW61 Transcriptional regulator, LysR family n=1 Tax=Arthrobacter sp. FB24 RepID=A0JW61_ARTS2 Length = 295 Score = 210 bits (535), Expect = 7e-53, Method: Composition-based stats. Identities = 66/314 (21%), Positives = 113/314 (35%), Gaps = 23/314 (7%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 + LDLNL+ + + RS+T+ A + +T +VS +L++LR DPLF G++P Sbjct: 1 MADLDLNLVKTFVSIYETRSLTQTAAEMCITQPSVSHALSRLRRQLGDPLFTRGAGGMTP 60 Query: 65 TPLMVSMEQNLAEWMQMSNLLLDKPHHQTP--RGLKFELAAESPLMMIMLNALSKQIYQR 122 T + V + + +L +D P F L M L AL K++ Sbjct: 61 TRVAVELFSTFKASLNAIDLAIDGTRDFDPTTSSRTFRLCLSDLGEMAFLPALMKRLLDS 120 Query: 123 YPQATIKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPC 181 PQ +++ D + + + G VD + I V+ + Sbjct: 121 APQIVLEVVPMQIDKVSEWLAHGAVDAAIASVPIGGA-----------IRSRVIDQEHYV 169 Query: 182 VWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQS 241 L L + L F H+ I + + + LG ER IA+ L F Sbjct: 170 CVLPDGAGGLAEKMTLSQFTGMRHVVIDP-SAGHHLAEAEIAALGIERNIALRLHHFSVL 228 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 + NL R + + + L + LP +L W+ + Sbjct: 229 P-LVLAGQNLAAIVPSRVARMFTEQAPLTIRELPFNVP-------SFDVSLYWNGTAPRS 280 Query: 302 PKIVWLRETIKNLY 315 + W ET+ + Sbjct: 281 RALRWFHETVADSL 294 >UniRef50_D2PY57 Transcriptional regulator, LysR family n=3 Tax=Actinomycetales RepID=D2PY57_9ACTO Length = 293 Score = 210 bits (535), Expect = 8e-53, Method: Composition-based stats. Identities = 42/307 (13%), Positives = 93/307 (30%), Gaps = 22/307 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L + +++ T+AA+ ++++ S +S S+ L LFV + + T Sbjct: 1 MELRHLEHFVAVAEQKHFTRAAEAMSISQSGLSASIRALERELHASLFVRNTRSVELTEA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTP-RGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 ++ + + D + E L ++ + AL + YP Sbjct: 61 GRALLCEGRRTLAAAEAAKDAVAAVQGLLRGHLNVGLEQCLGVVDVPALLAKFRSAYPGV 120 Query: 127 TIKLRN-WDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 I++R LD + G +D+ F +D L ++ + Sbjct: 121 EIEVRQGGSTPMLDELASGRLDVAFVA---------TAGDPVDGLDLRPLSTESMVLVCA 171 Query: 186 KDHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 DH + + +L+ + D G + + + + L + Sbjct: 172 HDHRLANASQVSLNDLAGESFVDFDRTWGARAISDQAFAAAGVAHPVTIEVNDVHTLLAL 231 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 A L +A P + V L ++ + + Sbjct: 232 VAHD--LGVALVPERIA--AKRGDHRTVPL------IPGSASAWQVSVAVPTTPAASLTA 281 Query: 305 VWLRETI 311 L + Sbjct: 282 NALIGML 288 >UniRef50_A2SKW7 Transcriptional regulator, LysR family n=24 Tax=Burkholderiales RepID=A2SKW7_METPP Length = 342 Score = 210 bits (535), Expect = 8e-53, Method: Composition-based stats. Identities = 40/315 (12%), Positives = 86/315 (27%), Gaps = 22/315 (6%) Query: 1 MKKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPL 60 M + L + + SV++AA +++T AVS L L PL S Sbjct: 1 MSNPLRNATFRQLAAFNAVARLGSVSRAADEMHLTQPAVSIQLGILEDAAGTPLLRRSAR 60 Query: 61 GLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQI 119 G+ T + + + + D + A +L L + Sbjct: 61 GVKLTEAGELLAGYASRILDLWGEAGDAMAAHCGDIAGLLRIGAV-TTAEYLLPPLLLEF 119 Query: 120 YQRYPQATIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSD 178 + +PQ +KL+ + D ++ + ++D+ GR + Sbjct: 120 VREHPQVKVKLQIGNRADVVNQLAGQDIDLAIMGRPPAELKTISAA----------FAKH 169 Query: 179 VPCVWLRKDHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPE 237 HP + L + + ++ + ++ G TI + Sbjct: 170 PMAFVAAPSHPLMTTPKPGLAALNQANLLVRERGSGTRTTVEQLFKDAGVSLTIGSEMSS 229 Query: 238 FEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKR 297 E M A + + L +E + ++ Sbjct: 230 NEAIKQMCAAGFGVAFLSLHSCVLELETGM--------LAILPMPDCPIERDWHVMHLAG 281 Query: 298 NSHNPKIVWLRETIK 312 + ++ Sbjct: 282 RPVPAAAAAFEQFLR 296 >UniRef50_Q7WGP5 LysR-family transcriptional regulator n=2 Tax=Bordetella RepID=Q7WGP5_BORBR Length = 303 Score = 210 bits (535), Expect = 8e-53, Method: Composition-based stats. Identities = 50/321 (15%), Positives = 100/321 (31%), Gaps = 25/321 (7%) Query: 1 MKKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPL 60 M + +++L L ++ E ++ +AA+++++ A+S S+A+L + LFV Sbjct: 1 MADFVASMNLKSLRHFCVVATELNLRRAAEQLHIAQPALSVSIAQLESRLGARLFVRGRR 60 Query: 61 GLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQT-PRGLKFELAAESPLMMIMLNALSKQI 119 G++ T + + ++ + L LA +L Q+ Sbjct: 61 GVTLTEAGALLLPEAMQILRHAERLPFLARDAASGDVGTLRLAFVGSAPYRLLPQALPQL 120 Query: 120 YQRYPQATIKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSD 178 + +P ++L D ++ + D+G ++ E++ D Sbjct: 121 QRAHPGVHVELYEATTDRIVEGLHNRTFDLGIVRYPLDA---------FPGLELELVDED 171 Query: 179 VPCVWLRKDHPA-LHQTWNLDTFLRYPHISICWEQS--DTWALDNVLQELGRERTIA-MS 234 CV L DH +L P + E S + Q G IA Sbjct: 172 GFCVALPHDHALVAAGEISLRDLADEPLLLPPREHSPPLRALMLEGFQAQGIMPRIANHM 231 Query: 235 LPEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLW 294 + L + +A P+ + PL + LL Sbjct: 232 ATQTATVLALVE--MGAGIALVPQSIV---GRVGYRVAFRPLAPGSRFRTG----LALLS 282 Query: 295 HKRNSHNPKIVWLRETIKNLY 315 + R I+ Sbjct: 283 SPDHHTT-LADHFRRAIRQRM 302 >UniRef50_C7RRH9 Transcriptional regulator, LysR family n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RRH9_9PROT Length = 309 Score = 210 bits (535), Expect = 8e-53, Method: Composition-based stats. Identities = 43/312 (13%), Positives = 88/312 (28%), Gaps = 21/312 (6%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 + L + + S TKAA+ +++T AVS + ++ PLF + Sbjct: 1 MPRRRITFRQLDTFAAVARHGSFTKAAEALHLTQPAVSLQVRQIVDSVGLPLFAQEGREV 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQIYQ 121 + T M + + + + +A S L + + Sbjct: 61 ALTQAGEEMLNTVRLLDDVWSRFESVIDDLKGLQRGRLRVALVST-ARYFLPRMLGNFCR 119 Query: 122 RYPQATIKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 R+P+ I + D D + + + D+ + + Sbjct: 120 RFPEIDIAMEITDRDRLVARMRGNQDDLYIMLYPPEEL----------EVVSYPFLDNEL 169 Query: 181 CVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQ 240 V H A Q+ L I +D LQ +G + + ++L E Sbjct: 170 VVIAALGHWAAGQSLELAALAGERFILREVGSGSRRTIDTHLQAIGLKLDVKLTLNSNEA 229 Query: 241 SLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 + A + A R+ + L + L P+ + K Sbjct: 230 ICDLVAS--GMGPAVLSRHALPADPASGG------LCILDINGFPLRKPWRAVHLKSKIL 281 Query: 301 NPKIVWLRETIK 312 + + + Sbjct: 282 SLPARAFLDHLL 293 >UniRef50_Q2T257 Transcriptional regulator, LysR family n=16 Tax=Proteobacteria RepID=Q2T257_BURTA Length = 323 Score = 210 bits (535), Expect = 8e-53, Method: Composition-based stats. Identities = 38/315 (12%), Positives = 93/315 (29%), Gaps = 25/315 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +L+ L C + +E +AA+R+++T +S+ + L L + + T Sbjct: 27 FELSQLRCFVAVAEELHFGRAAERLHMTQPPLSRQVRLLEHQIGTELLERTSRSVKLTAA 86 Query: 68 MVSMEQNLAEWMQMSNL-LLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + A +++++ T + + + +L +L + P Sbjct: 87 GRGFLPDAARILRLADEAAATARRIATGAAGTLAIGFTASVGYGLLPSLVSAVRAASPDV 146 Query: 127 TIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + L+ L+A+ +D+G + + + L Sbjct: 147 RLTLKEMVSGAQLEALDARLIDVGLLRPPVE----------HGELASLPCMREALVLALP 196 Query: 186 KDHPAL-HQTWNLDTFLRYPHISICWEQS--DTWALDNVLQELGRERTIAMSLPEFEQSL 242 + L P + ++ + +L+ I + + L Sbjct: 197 AASADAWPKRPTLRDCEGKPLLMYSPYEARYFHQLVSGLLERTDVLPDIVEYVSQIHSML 256 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 + + A P + + V TL + K N + P Sbjct: 257 ALVRA--GIGAALIPA-AASMLHFEGVVYRPV------RTMPAKPVELTLAYRKDNDN-P 306 Query: 303 KIVWLRETIKNLYAS 317 L++ ++ A+ Sbjct: 307 VFAALKDVLRKSLAA 321 >UniRef50_Q5NRI0 Transcriptional regulator, LysR family n=1 Tax=Zymomonas mobilis RepID=Q5NRI0_ZYMMO Length = 303 Score = 209 bits (534), Expect = 8e-53, Method: Composition-based stats. Identities = 43/311 (13%), Positives = 89/311 (28%), Gaps = 27/311 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 + L + + + +T A++ ++++ SAVS ++A L +D LF G+S + Sbjct: 1 MTFEQLRIFISVAERQHMTAASQDLHLSQSAVSSAIAALENRYDVKLFHRIGRGISLSEA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + ++ + L A + L L +RYP Sbjct: 61 GRLFLEEARSILRSAEAAEVMLKEIGGLKRGVLRLVASQTIASYWLPPLLLDFQKRYPLL 120 Query: 127 TIKLRNWDYDSLD-AITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + + + + + +G VD+GF E + + D + Sbjct: 121 DLDVAIANSEQTALQVEQGRVDLGFVEGEVDHPL----------LAQWPIGQDYLLLV-- 168 Query: 186 KDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRER---TIAMSLPEFEQSL 242 + P + + D + D L+ G + + LP E Sbjct: 169 RSTPFPEKDIDADYLRSARWVVREKGSGTRSTFDQFLRLYGVDPDSLDTVLVLPSNEAVR 228 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 + + + + PF L HK + Sbjct: 229 TAVEA--GAGITALSSFVVTPALKAGV--------LHAADLDLKPRPFFALRHKERYRSK 278 Query: 303 KIVWLRETIKN 313 L + I+ Sbjct: 279 ASDALLDLIRE 289 >UniRef50_Q13R07 Transcriptional regulator, LysR family n=1 Tax=Burkholderia xenovorans LB400 RepID=Q13R07_BURXL Length = 314 Score = 209 bits (534), Expect = 9e-53, Method: Composition-based stats. Identities = 49/319 (15%), Positives = 99/319 (31%), Gaps = 26/319 (8%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 + + L L C + S T AA R+ T S+++ ++ + LF + + Sbjct: 1 MRKISLRHLRCFAAVADTGSFTLAAARLYQTQSSLTATIQQFEEEVGLKLFDRTTRRVVM 60 Query: 65 TPLMVSMEQNLAEWMQMSNLLLDKPHHQT-PRGLKFELAAESPLMMIMLNALSKQIYQRY 123 T + +Q + + + +A+ ++ +L + Y Sbjct: 61 TEDAARFKPIADRVLQDFDTAIGDLKAISLSHRGHVRIASVPSMIEHVLAPALASFRRAY 120 Query: 124 PQATIKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCV 182 P TI + + D A+ GE D G + R ++ + Y + D V Sbjct: 121 PDITISVSDGSADKVERAVLAGEADFGMASRLNNFP----------DLTYLPILGDRFGV 170 Query: 183 WLRKDHPAL--HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAM--SLPEF 238 DHP Q + HI++ + LD+ LG + ++ Sbjct: 171 LYPDDHPLAKIRQPLRWADLSEFEHIALANDTGIGAFLDSH-PALGFHQKASLHDRASST 229 Query: 239 EQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRN 298 M ++ P + L + L + + L+ + Sbjct: 230 NSLFAML--NLGGRISVLPELSVLASPLKKFTFREL-------SEPVITREVCLITRQLR 280 Query: 299 SHNPKIVWLRETIKNLYAS 317 S +P L + + A Sbjct: 281 SFSPNTQRLVDALMENIAE 299 >UniRef50_C6QC52 Transcriptional regulator, LysR family n=1 Tax=Hyphomicrobium denitrificans ATCC 51888 RepID=C6QC52_9RHIZ Length = 295 Score = 209 bits (534), Expect = 9e-53, Method: Composition-based stats. Identities = 39/309 (12%), Positives = 93/309 (30%), Gaps = 24/309 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 + + L + + T+AA + ++ A+S+ + L A LF S + PT Sbjct: 1 MLIRQAHYLLAVADHGNFTRAASALRISQPALSQRILDLEAQLGAQLFDRSGRTVKPTDE 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTP-RGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + +++ ++ +A ++ L ++ Y+R+P+ Sbjct: 61 GRTYIEHVRRALREIQAGERAMQDIAGALSGTLRVAFLPLFTTHLVGPLMQEFYKRHPRV 120 Query: 127 TIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 ++ + + A+ +D+G + + I+ E + D C+ + Sbjct: 121 SVTIDILAQAELEAALVEDSIDVGLAFSDVDS----------DEIEVERIQDDELCLVVG 170 Query: 186 KDHPA-LHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 K HP + + +D + IA+ + + + Sbjct: 171 KRHPMYCMDKVRVPQLKHADLALLSQAFITRAPIDRYFRTNKVRPRIAIEANSADSIIAI 230 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 + + L +PLV ++L K + Sbjct: 231 VR-GAPIATVMPSATARQLPGLKAIPLVP----------SAGIWTLSVLQRKDAYRSAAS 279 Query: 305 VWLRETIKN 313 L +K Sbjct: 280 KALITIVKQ 288 >UniRef50_B2T4S2 Transcriptional regulator, LysR family n=18 Tax=Proteobacteria RepID=B2T4S2_BURPP Length = 329 Score = 209 bits (534), Expect = 1e-52, Method: Composition-based stats. Identities = 47/315 (14%), Positives = 92/315 (29%), Gaps = 21/315 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +DL + L ++ SVT+AAKR+N+ A+S +AKL LF + G++PT Sbjct: 1 MDLRQIQYFIALFEDGSVTRAAKRLNIVQPALSMQIAKLEDELHQQLFERNAHGMAPTAA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTP-RGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 M + M+ + + + + + +L + RYP Sbjct: 61 GRLMYRLFLPIMRDLAHARQQLVQRDEVVTGHVSIGLIASVTESVLADALSRFNARYPHV 120 Query: 127 TIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + + + +D + G++D + S +D + L + + Sbjct: 121 EVTVADGYSATFIDWVAGGQLDAALINKPRARLS----------LDAQPLLDEEMVLVTS 170 Query: 186 KDH-PALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 +H P L L + LD Q + + + Sbjct: 171 AEHGPELPHAIELAQLPELELVLPTKRHGLRGVLDTAAQHEDVLLAPRFEIDVLSTIVKL 230 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 PR L ++ + H R + Sbjct: 231 VETTHF--ATILPRIAVQRAVHLG------SLRAYPILAPRIVRHIVCVSHPRRPLSAAA 282 Query: 305 VWLRETIKNLYASMA 319 L I + ++ Sbjct: 283 DALVSIIADELRKVS 297 >UniRef50_P52595 HTH-type transcriptional regulator cbbR n=2 Tax=Rhodospirillum rubrum RepID=CBBR_RHORU Length = 298 Score = 209 bits (534), Expect = 1e-52, Method: Composition-based stats. Identities = 35/310 (11%), Positives = 82/310 (26%), Gaps = 23/310 (7%) Query: 10 LNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMV 69 L + + + S + AA+ + +T AVS + ++ A PLF L T Sbjct: 9 LRQMQIFDAVARHLSFSNAARELGLTQPAVSLQIKQIEALAGLPLFEQMGRVLLLTQAGT 68 Query: 70 SMEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNALSKQIYQRYPQATI 128 + ++ + + + S L YP + Sbjct: 69 ILLGHVRTILAAVTDADKAMDALKGKRAGALRIGVVST-AKYFAPRLLSVFTAGYPGVEL 127 Query: 129 KLRNWDYDS-LDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKD 187 L + + L I +D+ GR + L + + D Sbjct: 128 GLTVANREQILGMIQENALDLFIMGRPPTEPA-----------VRAELAPNPMVMVAASD 176 Query: 188 HPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQ 247 H + + + ++ ++ + G + + E Sbjct: 177 H-LVRRKLTFHDLSGETFLMREPGSGTRILMEKLMTDHGVLPHRMIEMSSNETIKQAVMA 235 Query: 248 PDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWL 307 + ++ R LV L + ++ + ++ + P + Sbjct: 236 --GMGISLLSRNTMSLELSVG-RLVILDVE-----GLPIQRDWYVVIREGKHLAPVAEAM 287 Query: 308 RETIKNLYAS 317 +K + Sbjct: 288 VAFLKAAART 297 >UniRef50_C5AIL5 Transcriptional regulator, LysR family protein n=1 Tax=Burkholderia glumae BGR1 RepID=C5AIL5_BURGB Length = 309 Score = 209 bits (534), Expect = 1e-52, Method: Composition-based stats. Identities = 44/317 (13%), Positives = 89/317 (28%), Gaps = 30/317 (9%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L + +E T+AA+R+ + +S+ + L LFV P G++ TP Sbjct: 1 MELRHLRYFLAVAEEGQFTRAAERLAMQQPPLSQQIRLLEEEIGFDLFVRLPRGVALTPA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIML-NALSKQIYQRYPQ 125 + QN + + + S L + P Sbjct: 61 GRAFAQNAGLVLDTLQQGVAHARRIARGELGAIAVGLTSSAGFHPLTTDAIRAFRAANPG 120 Query: 126 ATIKLRNWD-YDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 I L + + ++ ++ G++ + F + P + +E + + L Sbjct: 121 IEIALSERNAAELIEGLSHGQLQVAFLRKPVDA---------PSGVAFEQMLDEPMVAVL 171 Query: 185 RKDHPA------LHQTWNLDTFLRYPHISICWEQ--SDTWALDNVLQELGRERTIAMSLP 236 H L I + L + G +A +P Sbjct: 172 PVGHRLLAAIGDAPPAIPLKALEPEAFILVRRPGAPGMYADLLAACRRHGFVPQVAHEVP 231 Query: 237 EFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHK 296 + M A L + P + Y+ + + L P L + Sbjct: 232 RMLTGIHMVAA--GLGVTLVPASMRRYDNRSTVFC-------PLTADAGLSAPLHLAYPA 282 Query: 297 RNSHNPKIVWLRETIKN 313 +P + Sbjct: 283 E-LRDPAAARFVAFVLA 298 >UniRef50_UPI0001B57BFC transcriptional regulator n=1 Tax=Streptomyces sp. C RepID=UPI0001B57BFC Length = 321 Score = 209 bits (534), Expect = 1e-52, Method: Composition-based stats. Identities = 38/311 (12%), Positives = 94/311 (30%), Gaps = 24/311 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +DL L Q + + + +++AA+ + V +VS++++++ + LF + Sbjct: 27 MDLLALRYFQAVARHQHISRAAQELRVAQPSVSRTISRIESELGVHLFDRQGRRIRLNDR 86 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHH-QTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + + + + + + +AAE+ L L + + P Sbjct: 87 GAAFLRRVDKALAELEDGRREMADAAAGGPGRVAVAAETLLQ---LAGVLAAFRAQRPGV 143 Query: 127 TIKLRNWDYDSLDA-ITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 ++L + + + GEVD + + + L + + + Sbjct: 144 KVRLFQASLEGMRRHVVSGEVDFALAS----------QTLSGPGLASVELSREEVFLAVP 193 Query: 186 KDHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 H + + +S LD + G + E + M Sbjct: 194 LGHRLAGREDVAVVELAAEEFVSTRTGHWQRALLDRLFAREGLCPQVVCEGDEAAATPEM 253 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 L + P + P+ + + TL+W + +P Sbjct: 254 V--GAGLGVGLMPAVARRAIGEDG------PVAWARLGSTESRRTLTLVWRQGAYLSPAA 305 Query: 305 VWLRETIKNLY 315 + R + Sbjct: 306 LDFRRLTRERL 316 >UniRef50_A8GZD3 Transcriptional regulator, LysR family n=22 Tax=Gammaproteobacteria RepID=A8GZD3_SHEPA Length = 335 Score = 209 bits (534), Expect = 1e-52, Method: Composition-based stats. Identities = 85/295 (28%), Positives = 145/295 (49%), Gaps = 9/295 (3%) Query: 23 RSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSMEQNLAEWMQMS 82 +SVT AA R++++ SAVSK L+KLR FDD LF + GL TP + + L E +Q Sbjct: 44 QSVTSAATRLHLSQSAVSKQLSKLRETFDDQLFERTAYGLKATPRALQLAPELREVLQKL 103 Query: 83 NLLLDK-PHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQATIKLRNWDYDSLDAI 141 + +F + + ++ ++ PQ +I W + S++ + Sbjct: 104 DQFTRPSTFEPAESQRRFRMHIVETAYSLTYPYFMPKLLKQAPQVSINGHTWSHSSMEQL 163 Query: 142 TRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPALHQTWNLDTFL 201 R E+D+G RE RS +++LP + L D P LR+DHPAL + WN+DTFL Sbjct: 164 LRCEIDMGIICREWDKRSLLHMNNLPEELGAAELIRDYPVCLLRRDHPALKEPWNIDTFL 223 Query: 202 RYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQPDNLLLATAPRYCQ 261 +Y H+ + + + W LD+VL+ +R +A+++ +F ++ + D +L A +Y Q Sbjct: 224 KYRHLQVAFGGLEHWLLDDVLRLDHLQRDVAVNMTDFNCAMDLCENSDLILCA-PRKYIQ 282 Query: 262 YYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWLRETIKNLYA 316 + L + +P+ + + L+WHK + +P WLR I + Sbjct: 283 QMMVNYDLVCLDVPVHVEPGA-------YVLVWHKHFNLDPSHSWLRNLIIDGVR 330 >UniRef50_C9YDU9 HTH-type transcriptional activator cmpR n=1 Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9YDU9_9BURK Length = 309 Score = 209 bits (534), Expect = 1e-52, Method: Composition-based stats. Identities = 39/314 (12%), Positives = 85/314 (27%), Gaps = 22/314 (7%) Query: 7 TLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTP 66 + L L ++ S+T A++ ++VT VS L ++ PL+ + L T Sbjct: 14 NVTFKQLRTFLALAEQESITAASRALHVTQPTVSMQLKEITDSVGMPLYEVTGKKLQLTE 73 Query: 67 LMVSMEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNALSKQIYQRYPQ 125 +E + +L + + LA S L + +P+ Sbjct: 74 AGRDLEATARAMLHEWDLFEQGIAAKRGLTAGRLRLAVVST-AKYFTPRLLGDFCRMHPE 132 Query: 126 ATIKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 I L + D + + D+ + + ++ + Sbjct: 133 VEISLEVLNRDGVVQRLRENVDDLYIMSKPP----------ADIDAVAHAFLANPLVLIA 182 Query: 185 RKDHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 HP + L+ + D I + + E Sbjct: 183 PLAHPMALTKNIALEDLQAERFVLREKGSGTRLNTDAHFASHHFIPRIRLEMGSNEALKQ 242 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 A L L+ R+ + L E + + + + + +P Sbjct: 243 AVAG--GLGLSVVSRHAL------GPDIAGQGLAVLEVKGFPIVSNWYTVHLQGKRPSPL 294 Query: 304 IVWLRETIKNLYAS 317 ++ A+ Sbjct: 295 AEAFMGYLERFAAA 308 >UniRef50_A4BDL0 Transcriptional regulator n=2 Tax=Gammaproteobacteria RepID=A4BDL0_9GAMM Length = 323 Score = 209 bits (534), Expect = 1e-52, Method: Composition-based stats. Identities = 47/325 (14%), Positives = 100/325 (30%), Gaps = 28/325 (8%) Query: 3 KSITTL-DLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLG 61 +I L L L L + S++ AA+ +N++ +S L KL + D L+ Sbjct: 18 MNINRLGTLRQLEILVEVYHRGSISAAAETLNLSQPTLSMQLKKLASQNDIILYNQVGKR 77 Query: 62 LSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQIY 120 L T M + ++ L + +LA + L Sbjct: 78 LVFTEAGEVMVTSAKAILRELTALNSQLSELHGLTRGTLKLAVVTS-AKYFTPHLLGPFC 136 Query: 121 QRYPQATIKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 +RYP ++L+ + + + + + + E D R + LP Sbjct: 137 ERYPGIDVQLKIGNREQVIERLAQAEDDFYVFSHNPDMRHISAIEFLPN----------P 186 Query: 180 PCVWLRKDHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEF 238 + DHP + L+ L P + A+D L E + M++ Sbjct: 187 LVPIVANDHPLAKRKNLQLNDLLDEPFLMRETGSGTRRAIDRFLAEQNVSLNVRMTIESN 246 Query: 239 EQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRN 298 E + + + + + + + + ++ +W Sbjct: 247 EAIKHCVMSHLGM--SILSAHALSFGGDEGIVRLEV-------AGFPIVSQWSFVWPNEK 297 Query: 299 SHNPKIVWLRETI----KNLYASMA 319 + +P + + + +MA Sbjct: 298 TLSPVADVFLQYLQTEGRQTLDAMA 322 >UniRef50_A5VCH0 Transcriptional regulator, LysR family n=1 Tax=Sphingomonas wittichii RW1 RepID=A5VCH0_SPHWW Length = 327 Score = 209 bits (534), Expect = 1e-52, Method: Composition-based stats. Identities = 73/335 (21%), Positives = 133/335 (39%), Gaps = 40/335 (11%) Query: 4 SITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLS 63 +LDLNLL L +E SVT AA + +TPSAVS SL +LR D LF+ G++ Sbjct: 5 HFRSLDLNLLRVFDALTEEGSVTGAAGLLGLTPSAVSHSLNRLRHILKDDLFLRGAKGMN 64 Query: 64 PTPLMVSMEQNLAEWMQMSNLLLD-KPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQR 122 PTP +++ + + L+ +F +A + +++ + + + Sbjct: 65 PTPKALALAVPIRRALVDIQQALNGDSFVPEKTDRRFSIACGDYVTAVLMPEVIARFRKA 124 Query: 123 YPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCV 182 P A ++++ + + G +D+ G +P + E LF+D Sbjct: 125 APLAELRIQPVGA-VMKELDAGRIDLAMGG----------FERIPERLASEPLFADDMVW 173 Query: 183 WLRKDHPALHQTWNLDTFLRYPHISICWEQSDT--------------------WALDNVL 222 +R D P ++ L+ PH++I +D LD Sbjct: 174 VMRADSPFANRQPTLEGLAALPHLAIASPDNDRAVSGIVSDAGLERRVVRDDPRILDQYF 233 Query: 223 QELGRERTIAMSLPEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQ 282 +E G RT+AM+ P ++ + A+ D L + + ++L L P Sbjct: 234 EERGLRRTVAMTAPNPIVAMAIVAECD-LAAMMPRNLAEAFADRYKLALWKPP------- 285 Query: 283 QKKLEVPFTLLWHKRNSHNPKIVWLRETIKNLYAS 317 + +WH+ + P + WLR I+++ Sbjct: 286 HPSALFQISTVWHRWHGDQPAVDWLRAMIRSVAEE 320 >UniRef50_C4STU7 Transcriptional regulator n=2 Tax=Enterobacteriaceae RepID=C4STU7_YERFR Length = 304 Score = 209 bits (534), Expect = 1e-52, Method: Composition-based stats. Identities = 41/312 (13%), Positives = 95/312 (30%), Gaps = 22/312 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +DL + +E S +AA+R++++ +S+ + +L LF+ S G++ T Sbjct: 5 IDLRQFRYFVAVSEELSFRRAAERLHISQPPLSRQIHQLEELLGVQLFLRSQSGVTLTAA 64 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQ-TPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + + + P KF + + ++ + +Q+ Q +P Sbjct: 65 GAAFLPEAKLALLQAEKAITAARAAQDPEYRKFVIGYTTVFDRSVIPDVEQQLGQTFPDW 124 Query: 127 TIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + + L I G +D+ F G + + E ++ + L Sbjct: 125 QLVTKGKTSLPLLRDIKNGVMDVAFIGL--------NTAIAGDGLAIESIYQEPFIAALP 176 Query: 186 KDHPAL-HQTWNLDTFLRYPHISICWE--QSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 H + L P +G + + L Sbjct: 177 AHHHLANKRKLGLSDLKDQPIFWFKRRLNPGFYDYCQAFFDRVGFTFQVVPEPVDHHILL 236 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 + A+ + P + + + AL F + + N +P Sbjct: 237 GLIAEGQGIG--LIPSSLKKV-KREGVVFRALNHEFAALSMG-----IGIAYLSDNQ-SP 287 Query: 303 KIVWLRETIKNL 314 + E ++ + Sbjct: 288 VLRSFLEQVRQI 299 >UniRef50_A9ILQ9 Transcriptional regulator, LysR-family n=22 Tax=cellular organisms RepID=A9ILQ9_BORPD Length = 316 Score = 209 bits (533), Expect = 1e-52, Method: Composition-based stats. Identities = 42/310 (13%), Positives = 93/310 (30%), Gaps = 21/310 (6%) Query: 7 TLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTP 66 DL L + + S+T+ A++ +++ A S + L F L + G++ TP Sbjct: 4 HFDLTDLQLIVHIGDWHSLTRGAEKTHLSLPAASTRIKNLEEHFGTQLLYRTSQGVTLTP 63 Query: 67 LMVSMEQNLAEWMQMSNLLLDKPHHQ-TPRGLKFELAAESPLMMIMLNALSKQIYQRYPQ 125 ++ ++ M+ L + A + M + A+ + +P Sbjct: 64 SGEALTRHARTVMRQVEQLRGDMQEFARGVKGHVRVLANTTAMTEFMPAVLGRFLAAHPD 123 Query: 126 ATIKLRN-WDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 ++LR Y + A+ G D+G + + + D + Sbjct: 124 VNVELRERLSYLIVRAVAEGSADLGIVAG----------CTADQGLQFIPYRKDRLVMVA 173 Query: 185 RKDHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 HP + L ++ + + L LGR + + FE Sbjct: 174 AASHPLAREPAVAFADTLGNDYVGLSEWSAIHPFLVQAAAALGRTFKFRIEVGNFEAVCR 233 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 M + + + + + +V L + R++ Sbjct: 234 MIETGVGIGV-IPESVALRFARALNIAIVPL-------TDDWALRELQICVRDRDALPAF 285 Query: 304 IVWLRETIKN 313 L + + Sbjct: 286 ARELVDMLVA 295 >UniRef50_C6D8F3 Transcriptional regulator, LysR family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D8F3_PAESJ Length = 292 Score = 209 bits (533), Expect = 1e-52, Method: Composition-based stats. Identities = 45/309 (14%), Positives = 100/309 (32%), Gaps = 24/309 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L + + +T+AA+ +++T A+S S+ KL A PLF L Sbjct: 1 MELTQLEYFLRVARTEHLTRAAESLSITQPALSHSILKLEAELGVPLFERKGRSLKINRY 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQT-PRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + +++ +Q + + P LA + L + ++ L ++ P Sbjct: 61 GMMFSKHVERILQEVERGKKEIEEHSNPESGVIHLAYLNILGVDLIPKLIREYQLINPAI 120 Query: 127 TIKLRNWD-YDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 T +L D L+ + G D+ + + + ++ + S + + Sbjct: 121 TFELSQGDKGAILNQVEEGHADLMVTSEQPVNDTY----------EWVPMLSLPLYLVVS 170 Query: 186 KDHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 K+H ++ +L P + + S +L + + + Sbjct: 171 KEHRLADQESIHLGEITGEPFVGLKHNCSLKNSLLARVHHSNFTLASTYDAEDLQTVAGF 230 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 A L ++ PR + + + ++ L K +P Sbjct: 231 VAA--GLGISVLPRTAGLNLEG---------IKWIPIAEEGWRWEVGLHLKKERFLSPAT 279 Query: 305 VWLRETIKN 313 IK Sbjct: 280 ARFVRFIKE 288 >UniRef50_A1K5Q5 Transcriptional regulator, LysR family n=4 Tax=Betaproteobacteria RepID=A1K5Q5_AZOSB Length = 295 Score = 209 bits (533), Expect = 1e-52, Method: Composition-based stats. Identities = 42/308 (13%), Positives = 93/308 (30%), Gaps = 25/308 (8%) Query: 13 LLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSME 72 + + + + T+AA+R+++ +S + L LF S + T Sbjct: 1 MRYFVAVAETLNFTRAAERLHIGQPPLSMQIRDLETEVGARLFERSRRKVELTDAGERFL 60 Query: 73 QNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMI-MLNALSKQIYQRYPQATIKL 130 + + + ++ + + S L +L QR+P +++ Sbjct: 61 AHARAILARTEEAAEEARRAAAGEIGELRVGITSSLPYTAILPDALAAFRQRHPALRLQI 120 Query: 131 RNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHP 189 + DA+ + +D+G + + P I + D V + +HP Sbjct: 121 HEMFTAEQFDALAQDRLDVGLVRFD--------ATLAPPHIRVREIGRDALRVVVHAEHP 172 Query: 190 ALHQ-TWNLDTFLRYPHISIC--WEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAA 246 + + + IS LD + + G E + E + + A Sbjct: 173 LAAKASVSFAELRDADFISFPADAGTELPAILDRLCRGAGFEPRVVQLAREATTQIGLVA 232 Query: 247 QPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVW 306 + L AP C + LP+ + + P + H + Sbjct: 233 AGLGIALLPAPLECVRMP-----RVRYLPV-----KDAGADFPLAVACHAHRTR-AVTDR 281 Query: 307 LRETIKNL 314 + + Sbjct: 282 FLAVLDEV 289 >UniRef50_Q2JIR1 Transcriptional regulator, LysR family n=2 Tax=Synechococcus RepID=Q2JIR1_SYNJB Length = 293 Score = 209 bits (533), Expect = 1e-52, Method: Composition-based stats. Identities = 54/307 (17%), Positives = 116/307 (37%), Gaps = 24/307 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++++ L L +++ + + AA +++++ SAVS+++A L L V G TP+ Sbjct: 1 MNISQLQTLVAVVERGNFSDAALQLHISQSAVSRAIASLEEELGVTLLVRGRFGARLTPV 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + +++ + +Q+ + + + + +AA +L + + Q++PQ Sbjct: 61 GERLLRHVRKMLQLREQMDYEANLEKGLRGGNVRVAAFRSAATHLLPPVIARFRQQFPQI 120 Query: 127 TIKLRNWDYDSLDA-ITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 T+ L D +++ + G+VDIG + + D V + Sbjct: 121 TLTLTEEDPATVEHLLRSGQVDIGLLPLP----------RAGEDLQTWEIARDEFIVLVP 170 Query: 186 KDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMA 245 L +T + R+ +I + + A+ N + + +A + E + M Sbjct: 171 LSFGPLPETLTWEDLSRFSYILYNYAECT-TAVRNHWEAAHQTLKVAYLVKEDSTIVNMV 229 Query: 246 AQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIV 305 AQ L A PR + + LP+P E H P + Sbjct: 230 AQ--GLGAAILPRLAA-IPIPEGIQIRRLPIPL--------ERVIGAAVLASALHPPAVF 278 Query: 306 WLRETIK 312 E ++ Sbjct: 279 AFLEALR 285 >UniRef50_A9F0H5 Transcriptional regulator, LysR family n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9F0H5_SORC5 Length = 318 Score = 209 bits (533), Expect = 1e-52, Method: Composition-based stats. Identities = 38/317 (11%), Positives = 102/317 (32%), Gaps = 26/317 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L + +E + +AA++++V+ S +S+ + +L+ LF S G+ TP Sbjct: 1 MELRHLRYFIAIAEEENFRRAAEKLHVSQSPLSRQMQQLQEEIGAELFAPSGRGVKLTPA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAA-ESPLMMIMLNALSKQIYQRYPQ 125 + + + + + + L+ + + ++ P+ Sbjct: 61 GRLLLDRAKTILSDVDAAAKEARETAEGQIGTVTIGFESGSAYVGPLSTILTRFREQAPR 120 Query: 126 ATIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 ++L DA+ G++ +G+ S + VL + + Sbjct: 121 VNVELVPMSSAQQWDALRAGQISLGYGNYVPDDSS----------LQSVVLARHRLGIIV 170 Query: 185 RKDHPALHQT-WNLDTFLRYPHISICWEQSDT--WALDNVLQELGRERTIAMSLPEFEQS 241 + HP ++ + P + + + + ++ G +A + + E Sbjct: 171 PEQHPLATKSMIKVKDLANEPMLMDPRKSNPRLYDDIIAAVRARGVTLNVASEILDGEAL 230 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 L + A L + + + S + W + Sbjct: 231 LTLVASGFGLTFG-----AEPAAPFLAVGTA---IWKPVSDLGLEMRNIAM-WRPDAQ-S 280 Query: 302 PKIVWLRETIKNLYASM 318 + L + ++ A++ Sbjct: 281 VLLRPLVDLVREFGAAL 297 >UniRef50_Q1QXA1 Transcriptional regulator, LysR family n=1 Tax=Chromohalobacter salexigens DSM 3043 RepID=Q1QXA1_CHRSD Length = 324 Score = 209 bits (533), Expect = 1e-52, Method: Composition-based stats. Identities = 49/317 (15%), Positives = 101/317 (31%), Gaps = 22/317 (6%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 + L L Q + +++S ++AA+++ +T AVS + +L + PLF + L Sbjct: 7 LNRLTFRQLQVFQAVHRQQSYSRAAEQLGLTQPAVSAQIRQLEQALEQPLFKYAGKTLHV 66 Query: 65 TPLMVSMEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQIYQRY 123 P ++ ++ + L + + LAA S ++ + + RY Sbjct: 67 LPAADALAASVQSIFGQVSSLQMELSELAGTIRGELNLAAVST-AQYVVPHILARFRARY 125 Query: 124 PQATIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCV 182 P+ ++LR + +L+ + D+ G + + + + Sbjct: 126 PEVQVRLRVCNRGQALERLAERRDDLVIMGMVPE----------DANLAFMPILDNEMIP 175 Query: 183 WLRKDHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQS 241 + HP L L+ F RY + A ++ + + L E Sbjct: 176 VVWPGHPLLTADAPTLEDFTRYYVLMREPGSGTRTAFEDFVARERVSLRHTLELGTNEAI 235 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 +L +A PR L L L + + K Sbjct: 236 KQGVMA--HLGVAVLPRLAVQLELASGL------LASPTLPGFPLRRSWCTVHPKDRYPT 287 Query: 302 PKIVWLRETIKNLYASM 318 P ++ L + Sbjct: 288 PVTELFLRFVRELLPEL 304 >UniRef50_A4A3P1 Transcriptional regulator, LysR family protein n=5 Tax=Proteobacteria RepID=A4A3P1_9GAMM Length = 301 Score = 209 bits (533), Expect = 1e-52, Method: Composition-based stats. Identities = 46/298 (15%), Positives = 88/298 (29%), Gaps = 20/298 (6%) Query: 6 TTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPT 65 + L L +++ +AAK +V+ S +S + +L L + L T Sbjct: 3 RHPTIKQLRYLCSVVEHGHFGRAAKACHVSQSTLSAGILELEEVLGASLLERNNRSLVLT 62 Query: 66 PLMVSMEQNLAEWMQMSNLLLDK-PHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYP 124 L + + + L+ P + L + +L L K + +P Sbjct: 63 GLGEEVVERARGLLLDVEDLVALCQASAEPLSGRLRLGVIPTIAPFLLPGLLKSLRSDHP 122 Query: 125 QATIKLRN-WDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVW 183 + T +R +DA+ RGE L ++ LF D + Sbjct: 123 EFTPFIREDLTEPLVDALHRGE----------LDLLLLALPVQADGVESMHLFDDPFFLA 172 Query: 184 LRKDHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 DHP ++ + + + + GRE T+ + Sbjct: 173 SPVDHPLAAKSDLDTGDLQGQELLLLEDGHCLRDHALEACKLRGREYTVPYQATSLTTVV 232 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 M A + + P L + P ++ L+W K+ Sbjct: 233 QMVAS--GIGVTLVPGMAVTAGALATADVTVTPFA-----DPSVKRDIGLMWRKKTPR 283 >UniRef50_B8DKE3 Transcriptional regulator, LysR family n=1 Tax=Desulfovibrio vulgaris str. 'Miyazaki F' RepID=B8DKE3_DESVM Length = 307 Score = 209 bits (533), Expect = 1e-52, Method: Composition-based stats. Identities = 48/318 (15%), Positives = 85/318 (26%), Gaps = 21/318 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +D+ L + S KAA+ ++ PS V+ + L PLF + + T Sbjct: 1 MDIRHLKTFLAVAAGLSFRKAAESLHYAPSTVTAQIRALEEDLGAPLFERTGRRVLLTDH 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQAT 127 + +M++ H + + L M+ L ++ R+P Sbjct: 61 GRRLLPRARRIAEMADDARRAVTH-DADSGELSVRMSQSLGMLCLPEALRRFRVRFPATR 119 Query: 128 IKLRNWDYDSLDA-ITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRK 186 + + L A + GEVD+ +D E L + Sbjct: 120 VHVATASRHGLAADLRHGEVDLALL---------LGRPFAADGVDMETLRHEPLACIAAP 170 Query: 187 DHPALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMA 245 P P + S A++ L + + Sbjct: 171 GSPLAGHGRVTPADLAGQPLVLTRHVWSLRPAIEQTLAAAHVQPGSVLECSSIVIVKRCV 230 Query: 246 AQPDNLLLATAPRYCQYYNQLHQ-------LPLVALPLPFDESQQKKLEVPFTLLWHKRN 298 A L +A P LV P L VP L R Sbjct: 231 AA--GLGVAVVPLCAVRDEVDRGELRALDAAALVDAPRTDAPGIHTPLSVPVLLALPARR 288 Query: 299 SHNPKIVWLRETIKNLYA 316 + +++L+ Sbjct: 289 QVPAAAAFFAGILRDLFR 306 >UniRef50_B1KCH9 Transcriptional regulator, LysR family n=2 Tax=Burkholderia RepID=B1KCH9_BURCC Length = 299 Score = 209 bits (533), Expect = 1e-52, Method: Composition-based stats. Identities = 40/312 (12%), Positives = 100/312 (32%), Gaps = 22/312 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L + + + +AA R+ + +S+S+ +L L +P G+S TP Sbjct: 1 MELRHLRHFVAVAETQHFGRAAARLGMAQPPLSQSIMRLEEQLGIQLLERTPRGVSLTPA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQAT 127 ++ + + L + +A + ++ + + +++P Sbjct: 61 GAALLAEAKPLIAQAELAERRVRQAADELASLSVAFVPMCALRIMPLAIQALRRQWPGVD 120 Query: 128 IKLRNWDYDS-LDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRK 186 ++L + ++ G +D+G + S ++ V+ + Sbjct: 121 VRLIERGSALTVASVKNGSIDLGVVVTSAADVS---------GLESVVIERLRIVAAVPA 171 Query: 187 DHP-ALHQTWNLDTFLRYPHISICW--EQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 P A ++ + RYP I Q A + +E G + L Sbjct: 172 KWPVAAQRSIRIADLARYPLIIFPQQMSQPLFAAFEAARREEGLSPRVTQQARHPYTMLN 231 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 + A + L + + + +P E+ +L+W Sbjct: 232 LVAHELGVGLMLDSARYLPVEGVAYVDIEDVP--------ASSEMEVSLVW-ADRPQKSW 282 Query: 304 IVWLRETIKNLY 315 + + ++ + Sbjct: 283 HRSMLDIMREIA 294 >UniRef50_B9NTV8 Transcriptional regulator, LysR family n=1 Tax=Rhodobacteraceae bacterium KLH11 RepID=B9NTV8_9RHOB Length = 306 Score = 208 bits (532), Expect = 1e-52, Method: Composition-based stats. Identities = 38/308 (12%), Positives = 83/308 (26%), Gaps = 20/308 (6%) Query: 9 DLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLM 68 + + +++ A +NV+ S V+ ++ L PLF G++ T Sbjct: 4 SFKQIRYFIAVANAGQISRGAMDLNVSQSVVTTAIKSLEEIVGTPLFERHANGVTLTYEG 63 Query: 69 VSMEQNLAEWMQMSNLLLDKPHHQTP-RGLKFELAAESPLMMIMLNALSKQIYQRYPQAT 127 + ++ + P LA + L + +P T Sbjct: 64 DQFLGHARHIVESVEEAVRIPRKARQNISGTINLAVTYTVAGYFLPKPLAGFQRAFPGVT 123 Query: 128 IKLRNWDYDSLDA-ITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRK 186 + L D +++ + D+ I + VL +W+ Sbjct: 124 LNLFEADRATIEESLVTKGCDLAVM--------LTSNIVNHEDISHTVLLRSPRRLWVGA 175 Query: 187 DHP-ALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMA 245 HP +T L P+I + +++ AL + E M Sbjct: 176 HHPFLQQKTVGLKEISEAPYIMLTVDEASNTAL-KYWSNSQYQPNTVFRTSSVEAVRSMV 234 Query: 246 AQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS-HNPKI 304 A + + ++ L + + + L W Sbjct: 235 A--NGMGVSVLSDMVYRPWSLEGRRV-----EIVDVLDPIPTMDVGLAWPASTPERTDAA 287 Query: 305 VWLRETIK 312 + ++ Sbjct: 288 NAFIDFMR 295 >UniRef50_B0PHZ7 Putative uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PHZ7_9FIRM Length = 309 Score = 208 bits (532), Expect = 1e-52, Method: Composition-based stats. Identities = 50/310 (16%), Positives = 89/310 (28%), Gaps = 26/310 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +D L ++ S +KA R+ +T +S + L L V + + P+ Sbjct: 1 MDFKQLEAFAAVVNLGSFSKAGDRLFLTQPTISAHIRALERELGVQLIVRTTKEVYPSRE 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTP-RGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 ++M + + P +AA + +L + YP A Sbjct: 61 GKRFYAYAQNILRMRDDAIAAMTEAVPVVRGVITVAASTIPAQYILPDAMAAFCKSYPHA 120 Query: 127 TIKLRNWDYDSLDAI-TRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + D ++ + GE DIG +G + D V Sbjct: 121 VFRHICCDSAGVERLVADGEADIGMTGALMSGSRC----------SWHDFAGDELVVVTP 170 Query: 186 KD---HPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGR---ERTIAMSLPEFE 239 L + + LR P I A + L G + + L + E Sbjct: 171 NTPQYSVFLKEGIPPEVLLREPFIQREAGSGTRRAYERFLAAAGINTEQMRVVAELEDPE 230 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 A+ L ++ R L L+ALPL +E + K Sbjct: 231 SVKRSVAR--GLGISILSRRAIEEFCSFGL-LLALPL-----TTGVIERRLYIGCRKGAR 282 Query: 300 HNPKIVWLRE 309 + + Sbjct: 283 LSSVARTFLD 292 >UniRef50_C0ZNV8 Putative LysR family transcriptional regulator n=1 Tax=Rhodococcus erythropolis PR4 RepID=C0ZNV8_RHOE4 Length = 298 Score = 208 bits (532), Expect = 1e-52, Method: Composition-based stats. Identities = 72/317 (22%), Positives = 120/317 (37%), Gaps = 24/317 (7%) Query: 1 MKKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPL 60 M +DLNLL L+ E SVT AA+R+N++ A S++L +LR DDP+FV + Sbjct: 1 MAMD---MDLNLLRVFDALVAEGSVTGAAERLNLSIPATSRALGRLRRAMDDPIFVRAGR 57 Query: 61 GLSPTPLMVSMEQNLAEWMQMSNLLLDKP--HHQTPRGLKFELAAESPLMMIMLNALSKQ 118 GL PTP + + ++ + LL F + + AL ++ Sbjct: 58 GLVPTPFALRAAPQVRSLLEGAQGLLIDRKNFEPAELERTFVIRINEGTAASLTPALVRR 117 Query: 119 IYQRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSD 178 P A I+ + +D++ G +D+ + E+L+ + Sbjct: 118 FAAEAPNAVIRCVGEGNEDVDSLRNGSIDLDIGADPLPSS----------DVCSEILYRE 167 Query: 179 VPCVWLRKDHPALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPE 237 + K P L +PH+S +D+ L +G R + + Sbjct: 168 GHVGLVSKSSPLARTAQPTLAQLCEHPHVSTSRRGRTHGPIDDALSAVGMRRRVIAVVAS 227 Query: 238 FEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKR 297 + MAA D + L R +Y+ + A+P V WH R Sbjct: 228 PVAAALMAADSDLVAL-VPERLARYFAARLDVAWFAVPTELPA-------VTIHQQWHGR 279 Query: 298 NSHNPKIVWLRETIKNL 314 H+P WLRE ++ Sbjct: 280 LDHDPAHKWLREQVREA 296 >UniRef50_A9AQX4 Transcriptional regulator, LysR family n=20 Tax=Proteobacteria RepID=A9AQX4_BURM1 Length = 315 Score = 208 bits (532), Expect = 2e-52, Method: Composition-based stats. Identities = 72/321 (22%), Positives = 130/321 (40%), Gaps = 25/321 (7%) Query: 2 KKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLG 61 ++ +DLNL + + +R++T+AA+ +N+T AVS +LA++R +DPLFV++P G Sbjct: 17 AMRLSKIDLNLFVVFDAIYNKRNLTRAAELLNLTQPAVSNALARMRKTLNDPLFVSTPAG 76 Query: 62 LSPTPLMVSMEQNLAEWMQMSNLLLDK--PHHQTPRGLKFELAAESPLMMIMLNALSKQI 119 + PTP ++ + E +Q+ + + + F L+ ++L AL + + Sbjct: 77 MMPTPFAENIVGRVREALQLLDSSVHEGDVFDPASSERVFRLSMSDLTEALLLPALGELL 136 Query: 120 YQRYPQATIKLRNWD-YDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSD 178 ++ P ++ D + A+ G VDI + L D Sbjct: 137 QRQAPGMHVRSYTMDRREIATALANGTVDIAIDAPLLG----------DPHLHQAPLVRD 186 Query: 179 VPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEF 238 +R HP T +D +L HI + + + +D L LG R I M + + Sbjct: 187 RYACMIRDGHPFKGDTLTMDDYLAMGHIHVSSRRKGSGHVDAELTRLGLRRNIQMRVQHY 246 Query: 239 EQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRN 298 + +A + D L A Q + ++ LP + WH+ Sbjct: 247 MVAPLIAMRGDLALTAPL-----RLLQRYPARILELPFEMPGL-------EYFCYWHRSA 294 Query: 299 SHNPKIVWLRETIKNLYASMA 319 + WLRE + L M Sbjct: 295 DQDQANRWLRERLAELMRDMG 315 >UniRef50_UPI0001C30F5F transcriptional regulator, LysR family n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C30F5F Length = 296 Score = 208 bits (532), Expect = 2e-52, Method: Composition-based stats. Identities = 50/313 (15%), Positives = 92/313 (29%), Gaps = 21/313 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++ L L L ER T+AA R +V A+S+ L KL PL + ++ T Sbjct: 1 MEFRQLRYLVALADERHFTRAAARSHVAQPALSQQLRKLEDELGLPLVDRTTRRVALTEA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTP-RGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + + + + + + + L L + R+P Sbjct: 61 GELLVARARRVLAELDAAGAELQQVSGLLAGRVTIGLTQTPGPLDLLPLLADFHARFPAV 120 Query: 127 TIKLRN-WDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + +R + E+D+ + + L + L Sbjct: 121 ELAVREDLSTTLAAQLRADELDVALLS--------TVARGDLEGLGVRPLAHERLVAALP 172 Query: 186 KDHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 H + L ++ + A+ G IA E ++ + Sbjct: 173 PAHRLAGRRRVALADLRDERFVAFTPGATIREAVAAAALAAGFAPRIAFETREVARTRAI 232 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 A L +A PR Q+ + L + L L W + H+P Sbjct: 233 VAA--GLGVAVLPRS-DALAPGPQVAVAEL-------VRPALTHRIALAWREGRHHSPAA 282 Query: 305 VWLRETIKNLYAS 317 L E + YA Sbjct: 283 RALLEQARTTYAR 295 >UniRef50_Q28KZ9 Transcriptional regulator, LysR family n=8 Tax=Proteobacteria RepID=Q28KZ9_JANSC Length = 312 Score = 208 bits (532), Expect = 2e-52, Method: Composition-based stats. Identities = 39/321 (12%), Positives = 92/321 (28%), Gaps = 19/321 (5%) Query: 1 MKKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPL 60 M + L L L L R +AA+ ++ ++S + L L Sbjct: 1 MHNTTLPFTLRQLRYLAALEDMRHFREAAEACGISQPSLSVQIKSLEDALGLTLVERGRG 60 Query: 61 GLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQT-PRGLKFELAAESPLMMIMLNALSKQI 119 + T + + E + +LD G + + L ++ + + Sbjct: 61 PVRLTHAGREVSRRAREILDAGQGILDLSATLQSGLGGTLRMGTSTTLGPYLMPHVVGDL 120 Query: 120 YQRYPQATIKLRN-WDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSD 178 ++ +P + +R + + + G D+ + + LF + Sbjct: 121 HRSHPDLRLYIRENAPRNLVRELNDGTHDLILTQLPVQGA----------RLTSTRLFRE 170 Query: 179 VPCVWLRKDHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPE 237 + + DH + + +S+ + ++ + E G + + Sbjct: 171 PLGLAMPVDHALSEASNIDGPDLEGQSILSLSPAYALHDQINALCVETGAQMSRDYEGTS 230 Query: 238 FEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKR 297 + M A ++ L P A + + +K L+W Sbjct: 231 LDALRQMVA--LDMGLTFLPALYVRSEIEG----RAQDVVVRPFRGRKFFRSIGLVWRSS 284 Query: 298 NSHNPKIVWLRETIKNLYASM 318 + P L I++ Sbjct: 285 SGAAPAFERLAGAIRDTARRF 305 >UniRef50_C7N070 Transcriptional regulator n=1 Tax=Saccharomonospora viridis DSM 43017 RepID=C7N070_SACVD Length = 302 Score = 208 bits (532), Expect = 2e-52, Method: Composition-based stats. Identities = 40/310 (12%), Positives = 86/310 (27%), Gaps = 25/310 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++ L + S T AA ++V+ ++S ++ L PLF G++ TP Sbjct: 1 MERKQLEYFLAIAAHGSFTSAAGSLHVSQPSLSYAIRGLEKEIGAPLFRRLGRGVALTPA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTP-RGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 ++ + +Q + T + ++ + L + L L +R+P Sbjct: 61 GEALLPSARRVIQAFARFHTEAQRITQVVSGRLDIMTVTTLAVDPLAPLVGAFRERHPGV 120 Query: 127 TIKLR--NWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 + + + A+ GE ++G + + L L Sbjct: 121 ELSIVDPENAAAVVSAVRNGECELGLTEHGIAAE----------GMVVLDLPEQELYAVL 170 Query: 185 RKDHPA-LHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 ++ + A+DNVL G +A+ + + Sbjct: 171 PPRTELKPPGPITARQLAALDIVTTPPGTTTRSAVDNVLASAGATTRVAVEVTHRAAIVP 230 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 + P + L L++ +P Sbjct: 231 LVLA--GAGATLLPSRLARDAASRGAVIAPL--------NPPATRHGVLVFLP-TQLSPA 279 Query: 304 IVWLRETIKN 313 E +K Sbjct: 280 AQAFVELVKE 289 >UniRef50_C9KN75 Transcriptional regulator, LysR family n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KN75_9FIRM Length = 283 Score = 208 bits (532), Expect = 2e-52, Method: Composition-based stats. Identities = 44/297 (14%), Positives = 89/297 (29%), Gaps = 25/297 (8%) Query: 19 LMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSMEQNLAEW 78 + + S T+AA+R+ V+ AV+ ++ L LF S ++ T ++ + Sbjct: 2 VREAGSFTRAAERLYVSQPAVTNAVRSLEEELGIQLFDRSQKLVTLTAEGRIFASHVEKI 61 Query: 79 MQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNALSKQIYQRYPQATIKLR-NWDYD 136 M +++ H L M + ++ + +P I LR Sbjct: 62 MHGITTTVEEIHALKNLTSGVLTLGLTPLGAMRAIVHQLREYHLAFPDIQIALREEDTSR 121 Query: 137 SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPALHQ-TW 195 A+ ++D+ + LS P + + + HP + T Sbjct: 122 LQQALLEDKLDLAILPAPKDNPALSSLSFTP----------EELVICCSRSHPLHRRNTL 171 Query: 196 NLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQPDNLLLAT 255 L I + + L + +E G IA + + A ++ Sbjct: 172 ELKELSAEQLILLKKDCLYRQELIDAFEETGSLPRIAFESQSVQTIKGLVAA--GCGVSI 229 Query: 256 APRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWLRETIK 312 P L ++PL L + + W + + K Sbjct: 230 LPESLVE----DDTALASIPLE------PPLRLTNRIFWKTNHHLSHAAEAFLNLFK 276 >UniRef50_C0D9J1 Putative uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D9J1_9CLOT Length = 299 Score = 208 bits (532), Expect = 2e-52, Method: Composition-based stats. Identities = 43/312 (13%), Positives = 98/312 (31%), Gaps = 19/312 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +++ ++ + + ++ +KAA+++ + SAV+ + +L LF + T Sbjct: 1 MEIRNIITFVRIAELQNFSKAARQLGYSQSAVTMQIKQLEEELHAQLFDRIGKHIRLTQA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQAT 127 + + E + + + L++ +L + + YP+ Sbjct: 61 GQRLLPHALEILDGVRRAQSITREPEEVSGRLRIGTAESLLINVLPPVIIEFSCLYPRVE 120 Query: 128 IKLRNWD-YDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRK 186 + + D + R E+D+ + ++ P I + Sbjct: 121 VSTQTASVADLFAMVQRNEIDL--------LYFLDRKTNFPEWIKVAE-RPEPAAFVASA 171 Query: 187 DHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMA 245 Q +L+ L P + S +A++ VL E G E + + M Sbjct: 172 QSRLAGQRQISLERLLEEPFLLTEKGISYRYAMEQVLAESGMEIHPFLETGNTDIITKML 231 Query: 246 AQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIV 305 + ++ P + L L E L++HK P++ Sbjct: 232 LENRG--ISFLPEFVVRDYIQDG-RLAVLDTVCPEICMWSQ-----LVYHKNKYLTPQME 283 Query: 306 WLRETIKNLYAS 317 E + S Sbjct: 284 RFTELMVRQIGS 295 >UniRef50_Q4ZT12 Regulatory protein, LysR:LysR, substrate-binding n=3 Tax=Pseudomonas RepID=Q4ZT12_PSEU2 Length = 313 Score = 208 bits (532), Expect = 2e-52, Method: Composition-based stats. Identities = 52/321 (16%), Positives = 111/321 (34%), Gaps = 29/321 (9%) Query: 2 KKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLG 61 K + + + + Q S +KAA +N++PSA++ + +L W L SP Sbjct: 14 KNKMKN-SIQHIRAFLSVAQTGSFSKAAATLNLSPSALTVQIQQLEDWLGVALLERSPRH 72 Query: 62 LSPTPLMVSMEQNLAEWMQMSNLLLDKPHH-QTPRGLKFELAAESPLMMIMLNALSKQIY 120 + T + + + + + ++ R +AA L +L + K Sbjct: 73 VCLTGAGQNALLPMEKLLLDLDNIVSAARDIAASRRGLITIAALPSLCSGVLPTVLKTFR 132 Query: 121 QRYPQATIKLRNWDYDSLD-AITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 +R+P ++LR+ +D + EVD G + + +++ + D Sbjct: 133 ERFPGVEVRLRDVVAQRIDTLVMEREVDFGLG----------VQARPTHGLEFNAILEDR 182 Query: 180 PCVWLRKDHPALHQ-TWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEF 238 C++ +DHP + L+ +P + E S ++ V + + + Sbjct: 183 LCLFAPEDHPLAKRCAVRLNEIAVFPIVLTGRESSVRDLVERVFADEQLPLSAGLEANYM 242 Query: 239 EQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRN 298 L + Q + P + L +P+ + L+ Sbjct: 243 STVLALVRQ--GQGITLLPESA----DDGRGDLSKVPVDHP-----GVVRQIGLITRSEQ 291 Query: 299 SHNPKIVWLRETIKNLYASMA 319 + LRE K+ ++A Sbjct: 292 TRG----RLRERAKSYAKALA 308 >UniRef50_Q1DCG4 Transcriptional regulator, LysR family n=2 Tax=Cystobacterineae RepID=Q1DCG4_MYXXD Length = 302 Score = 208 bits (532), Expect = 2e-52, Method: Composition-based stats. Identities = 59/310 (19%), Positives = 105/310 (33%), Gaps = 21/310 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 + L L +++ S ++AA+ +VT SAVS+ + L ++ L S ++PTP Sbjct: 1 MQLESLKMFCDVVETGSFSRAAQLNHVTQSAVSQQIRALENRYEQKLLSRSARQVTPTPA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + E + + + Q ++ + + LN++ KQ+ + +P+ Sbjct: 61 GERLFRGCKEILARFAEVEQEIREQATEVAGTTTVSTIYSVGLHELNSVQKQLLKSHPKV 120 Query: 127 TIKL-RNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 ++L + D + G +IG +D D V Sbjct: 121 NMRLNYRRNDQVYDDVILGAAEIGIVAYPQPRA----------GVDILPFRDDKLSVVCA 170 Query: 186 KDHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 DHP Q +L P I+ E ALD + +E + M + E Sbjct: 171 PDHPFATKQKVSLTALSGVPFIAFDREAPTRKALDRLFREKSIDINPVMEMDNVETIKRA 230 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 L +A P LVA P + + P LL K + Sbjct: 231 VE--MGLGVAILPMSTAQGEVKGG-SLVAKPFA-----EGPVSRPIGLLIRKGKYLDRAS 282 Query: 305 VWLRETIKNL 314 + E K Sbjct: 283 AAVLEAFKAA 292 >UniRef50_C5AL93 Transcriptional regulator, LysR family protein n=13 Tax=Burkholderia RepID=C5AL93_BURGB Length = 331 Score = 208 bits (532), Expect = 2e-52, Method: Composition-based stats. Identities = 73/322 (22%), Positives = 130/322 (40%), Gaps = 24/322 (7%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 +S+ +DLNLL +++E+S+TKA R+ ++ A+S SLA+LRA FDDPLFV + G+ Sbjct: 2 RSLDGVDLNLLQVFLAIVEEQSLTKAGARLALSQPAMSYSLARLRALFDDPLFVRTRHGM 61 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPR--GLKFELAAESPLMMIMLNALSKQIY 120 PTP+ + +A + L P F L+ M L ++ +++ Sbjct: 62 QPTPISQELAVIVARALDTVREALRYAERFDPAVSTRAFRLSLSDAGEMAYLPSICEEVN 121 Query: 121 QRYPQATIKLRNWD-YDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 + P + ++ + DA+ +D ++VLF + Sbjct: 122 RLAPNIKVVVQPLPVGEIEDALRARRLDFAIGNLPELTART----------RHQVLFEEG 171 Query: 180 PCVWLRK--DHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPE 237 +R+ P L F R H+ + + ALD+ L+ G R I + +P Sbjct: 172 YVCMMRRRVGGP-ARPALTLAEFGRASHVLVRSIEHSHHALDDALRTQGVARNIGLEVPH 230 Query: 238 FEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKR 297 F + A D + R Q + + + LP+ T+ WH+ Sbjct: 231 FVALPRVLAVTDFVA-TLPRRLAQIFAKDGAFDIFELPVAIAPVG-------VTMHWHEH 282 Query: 298 NSHNPKIVWLRETIKNLYASMA 319 + I W+R+ + + A Sbjct: 283 FHEDEGIAWMRQLLGQIMRRFA 304 >UniRef50_C4DN91 Transcriptional regulator, COG0583 n=2 Tax=Actinomycetales RepID=C4DN91_9ACTO Length = 311 Score = 208 bits (532), Expect = 2e-52, Method: Composition-based stats. Identities = 39/314 (12%), Positives = 91/314 (28%), Gaps = 27/314 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L Q + + ++++AA+R+ + ++S+++A+L + PLF +S Sbjct: 1 MELLALRYFQTVARTENISRAAERLRIAQPSLSRTIARLESELKVPLFDRRGRNISLNRF 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIML--NALSKQIYQRYPQ 125 V+ + + + + + + +L + YP Sbjct: 61 GVAFLHRVDKALAELDDARRELTESAGLER----GGFAIASETLLTVTDTMSEFLTEYPD 116 Query: 126 ATIKLRNWDYDSLDAIT-RGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 ++L D + + +VD+ + + + + + + Sbjct: 117 VEVRLYQATGDEMRQLLQSRQVDMCLAS----------QQLTDPSFTGVEVIREEVLLAV 166 Query: 185 RKDHPALHQ-TWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 H +Q L P I+ LD + + G I E Sbjct: 167 PPHHRLANQTRVTLADIADEPFITTRPGYWLRTLLDRLFADAGLRPVIRCEGDEPGVIQT 226 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 M L + P +Y + + + L L W+ + Sbjct: 227 MI--STGLGIGLNPSQARYSDIRTDVAWLHLD-------APDCHRVLRLYWNTDAFVSQA 277 Query: 304 IVWLRETIKNLYAS 317 R+ Sbjct: 278 ARRFRDFTIERLRQ 291 >UniRef50_A4SH82 Transcriptional regulator, LysR family n=2 Tax=Aeromonas RepID=A4SH82_AERS4 Length = 324 Score = 208 bits (532), Expect = 2e-52, Method: Composition-based stats. Identities = 69/318 (21%), Positives = 129/318 (40%), Gaps = 21/318 (6%) Query: 1 MKKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPL 60 M+ ++ LDLNLL +LMQER+VT+AA+R++++ S VS +L +LR DDPLFV S Sbjct: 1 MELPLSRLDLNLLTVFDMLMQERNVTRAAERLHLSQSTVSHALGRLRQALDDPLFVMSRR 60 Query: 61 GLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTP--RGLKFELAAESPLMMIMLNALSKQ 118 + PT ++ + + + M L + P F +A + ++ AL +Q Sbjct: 61 EMMPTERAKTLAGPVRQALAMLEQGLRQAEGFDPASARRIFRIATPGSVEHGLVPALVEQ 120 Query: 119 IYQRYPQATIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFS 177 ++++ P +++ D D + +GE+D+ +++ + E F+ Sbjct: 121 LHRQAPHCRLEVCELADSDYERELEKGELDLVIGFADANH--------FSPRLWREPWFN 172 Query: 178 DVPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPE 237 + + + PHI +D L G ER + + LP Sbjct: 173 NPLVCLSPLGSEL-PEVLGPAELVSRPHIHTSSWGHSQAMVDLWLARFGVERELGVRLPS 231 Query: 238 FEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKR 297 F + A L + +++ + + L L L + + H Sbjct: 232 FMAVPPLMATGRYL-VVVPEMIGRHFCRYYPLRLHQLNPEIPIV--------YLMAGHPL 282 Query: 298 NSHNPKIVWLRETIKNLY 315 +H+ I W + + L Sbjct: 283 TAHDQAIGWFKGLLHRLA 300 >UniRef50_Q2SKI3 Transcriptional regulator n=3 Tax=Oceanospirillales RepID=Q2SKI3_HAHCH Length = 296 Score = 208 bits (531), Expect = 2e-52, Method: Composition-based stats. Identities = 61/319 (19%), Positives = 122/319 (38%), Gaps = 28/319 (8%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 I L+++ L L L + ++T AA+ ++++ A+S+ L KLR D LFV + G++P Sbjct: 2 IEKLEIHHLRTLDALYRFGNITAAAESLDLSQQAISQQLKKLRGILSDQLFVRTGHGVAP 61 Query: 65 TPLMVSMEQNLAEWMQMSNLL-LDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRY 123 TP +E ++ + + + L + ++A +++ L ++ + Sbjct: 62 TPYAKQIEPHIQRVLAHLHAIPLPEAFSLAKMERTLVISATDYTQKVIVTGLVAELRKAA 121 Query: 124 PQATIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCV 182 P+ + + N + +GE+D+ F+ +P + E LF++ Sbjct: 122 PRVKVVVANIESASLTRKMRQGEIDLAFTSH----------GYVPEGLLSEPLFTERYLC 171 Query: 183 WLRKDHPALHQ-TWNLDTFLRYPHISICWE-QSDTWALDNVLQELGRERTIAMSLPEFEQ 240 D Q +LD + I + D ++ G R + +S P F Sbjct: 172 V-SADAGLAGQGEISLDQLVARDFIVTSPGVGGFAGSADAWFEQQGLRRNVTISAPSFHI 230 Query: 241 SLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 + D +A P L ++PL P +H Sbjct: 231 AQEYLKATDM--VAFVPSRLLPCEGLFEIPLKKYP----------PGYEVVAAYHPSAKD 278 Query: 301 NPKIVWLRETIKNLYASMA 319 +P I+W + ++ AS+A Sbjct: 279 DPLIMWALKAVQQ-CASLA 296 >UniRef50_UPI0000383CFA COG0583: Transcriptional regulator n=1 Tax=Magnetospirillum magnetotacticum MS-1 RepID=UPI0000383CFA Length = 329 Score = 208 bits (531), Expect = 2e-52, Method: Composition-based stats. Identities = 80/321 (24%), Positives = 129/321 (40%), Gaps = 25/321 (7%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 TLD+ + L +L+ E +V++AA+R+ VS +L +LR DPL V L P Sbjct: 6 PATLDVRAMRTLLVLLTECNVSRAAERLGQAQPTVSLALKRLREMLGDPLLVRYGGSLVP 65 Query: 65 TPLMVSMEQNLAEWMQMSNL--LLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQR 122 T + ++ +L + + F LAA + L + L L + I + Sbjct: 66 TERGLDLKVSLEAILSEIDARLTPHPTFDPAHSDRTFRLAANNCLGSVFLPPLVRTIRRA 125 Query: 123 YPQATIKL--RNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 P T+++ D L + G +D P + L S Sbjct: 126 APGVTVEVGQTPPMEDLLRQMAEGAIDAVIGNWPQP----------PSHLRISTLLSTDI 175 Query: 181 CVWLRKDHPALHQ--TWNLDTFLRYPHISI-CWEQSDTWALDNVLQELGRERTIAMSLPE 237 +R +H + +L FL H+S + +D L ELG +R IA+++PE Sbjct: 176 VCVMRPNHRLARREGRIDLADFLAEGHLSPTSDRNAQLSPIDGRLIELGLKRRIAVTVPE 235 Query: 238 FEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKR 297 + +M AQ D LL T + + Q LV P + F +LWH Sbjct: 236 YAMVPYMLAQSD-LLFTTGRHFAEQIAQSFAFSLVDAPEEL-------GRMSFYMLWHDC 287 Query: 298 NSHNPKIVWLRETIKNLYASM 318 H+P WLR TI+++ A + Sbjct: 288 KHHSPAHAWLRRTIRSVAADI 308 >UniRef50_A8L1J4 Transcriptional regulator, LysR family n=2 Tax=Bacteria RepID=A8L1J4_FRASN Length = 320 Score = 208 bits (531), Expect = 2e-52, Method: Composition-based stats. Identities = 43/310 (13%), Positives = 87/310 (28%), Gaps = 20/310 (6%) Query: 9 DLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLM 68 L L L + R +AA ++V+ +S ++A L L + + TP+ Sbjct: 7 TLAQLRALVGVADHRHFGRAATSLHVSQPTLSSAVAALERTLGIQLVERTTRSVLLTPVG 66 Query: 69 VSMEQNLAEWMQMSNLLLD-KPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQAT 127 + Q + + + + P L + +L L + R P+A Sbjct: 67 EEIVQRARGVLGAVDDIAQLAVRARAPLSGDIRLGVIPTVAPYLLPQLLPSLRARRPEAR 126 Query: 128 IKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRK 186 ++LR L+ + G +D+ + + L+ + + Sbjct: 127 LRLREAQTSALLEELRGGSLDLALLALPTDEP----------GVAELPLYDEDFVLVTPV 176 Query: 187 DHPALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMA 245 DHP + + + + +V +E G A+ + M Sbjct: 177 DHPMAGSAALPVSSLCGRDLLLLEDGHCFRAQALDVCREAGARERSALRAASLSTIVQMV 236 Query: 246 AQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIV 305 A L L P L + L + ++ Sbjct: 237 AG--GLGLTLIPAAAVGVEVGEG-----RGLATATFRNPAPRRRIGLAYRTTSARVADWT 289 Query: 306 WLRETIKNLY 315 L I+ Sbjct: 290 LLAAEIREAL 299 >UniRef50_Q1LGF7 Transcriptional regulator, LysR family n=5 Tax=Burkholderiales RepID=Q1LGF7_RALME Length = 300 Score = 208 bits (531), Expect = 2e-52, Method: Composition-based stats. Identities = 49/315 (15%), Positives = 95/315 (30%), Gaps = 22/315 (6%) Query: 7 TLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTP 66 DL L + + ++T+AA+R ++ A S + +L F L + G+ TP Sbjct: 2 HYDLTDLRLFLNVGETENITRAAERSFLSLPAASARIKQLEEAFQTQLLIRQVKGVRLTP 61 Query: 67 LMVSMEQNLAEWMQMSNLLLDKPHHQT-PRGLKFELAAESPLMMIMLNALSKQIYQRYPQ 125 ++ ++ E + L + L A + L + P Sbjct: 62 AGDALLRHAREVFRELECLHSDLRPYAKGVKGRVRLLANTTATNSFLAHALSRFLSENPD 121 Query: 126 ATIKLRN-WDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 I+L D + AI G D+G E +D L SD V Sbjct: 122 VDIELEEHLSADIVSAIGTGAADLGIVAGEVATA----------DLDTMQLCSDELIVIA 171 Query: 185 RKDHPA-LHQTWNLDTFLR-YPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 +HP +T L + + + LD + +G+ ++ + + F+ Sbjct: 172 PVNHPLPAFKTLRFAELLDSCRFVGLNQSSAIQSFLDRIASGMGKRISLRIQVGSFDAVC 231 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 M + + + Y L + L + L+ Sbjct: 232 RMVEAGAGIAI-VPNSCARRYASRKVLRFIRL-------EDDWARRELQLVRRPGRELPQ 283 Query: 303 KIVWLRETIKNLYAS 317 L + + + Sbjct: 284 FAETLIQYLVDAARE 298 >UniRef50_B5XYZ1 Transcriptional regulator, LysR family n=5 Tax=Klebsiella RepID=B5XYZ1_KLEP3 Length = 308 Score = 208 bits (531), Expect = 2e-52, Method: Composition-based stats. Identities = 68/312 (21%), Positives = 124/312 (39%), Gaps = 21/312 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 LD L L + +V+ AA +N++ S L KLR F DPLFV + PTP Sbjct: 5 LDFKSLRFFSALYRLGNVSPAADALNISQPTGSLLLKKLRDHFADPLFVRVGQRMMPTPR 64 Query: 68 MVSMEQNLAEWMQMSNL--LLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYP- 124 ++ + +Q+++ + F + M +L L + Q+ Sbjct: 65 ADAIAPTVFTLLQLADNDLAVKPEFLPQQSQRNFTIGMTDISQMTLLPLLQIALQQQAAD 124 Query: 125 QATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 T ++N D +L+A+ G+ D+ L+ LP ++ + LF Sbjct: 125 GITFTIQNLDEQTLNALESGKCDLAIGY----------LTQLPDSVYQQHLFDQSYVCLA 174 Query: 185 RKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 ++HP + + + + H++I E + +D L E R IA++LP F + + Sbjct: 175 AENHPRIRTQLRAEDWRQEKHLAIRVEGTAHGDMDKRLDEHSMPRRIALTLPSFLGTGEL 234 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 A+ D + + + ++ + + LP P +WH+R +P Sbjct: 235 VAESDMIAV-VPEQVARHITRRYPCRSWPLPFPLARIA-------IRQVWHQRLHRDPGH 286 Query: 305 VWLRETIKNLYA 316 +WLR I L Sbjct: 287 IWLRSLIAALAD 298 >UniRef50_A1WN33 Transcriptional regulator, LysR family n=1 Tax=Verminephrobacter eiseniae EF01-2 RepID=A1WN33_VEREI Length = 311 Score = 208 bits (531), Expect = 2e-52, Method: Composition-based stats. Identities = 44/304 (14%), Positives = 105/304 (34%), Gaps = 19/304 (6%) Query: 7 TLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTP 66 ++ + L + + S++ A + ++++ +A+++++ +L A LF G++ T Sbjct: 2 SISIRTLQYFNAVAETGSISAAMQTLDISQAAITEAIQRLEAHLGSMLFRRHARGMALTH 61 Query: 67 LMVSMEQNLAEWMQMSNLLLDKPH-HQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQ 125 ++ + + + + + A SPLM L L ++ + +P+ Sbjct: 62 AGHEFLRHSHLILNAVSSAENALAVRPDAMTGELSIGAVSPLMGYYLPGLLERFRRSFPR 121 Query: 126 ATIKLRNWDYDSLDAIT-RGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 T+++ +++ + GE+D+ + A L +WL Sbjct: 122 VTVRIIEESGSTIEHLIVNGEIDVALT--------LTSHLENHHAFHTLQLVRSPWHLWL 173 Query: 185 RKDHPALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 H + + L I + ++ + D L+E I E Sbjct: 174 PTGHRLVGAKPVTLRELHNEAVIVLRNDELERTTGDLWLRES-VRPRIVAKTRSVEAVRS 232 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 + A + + P L L+A PL + + + L+W + + Sbjct: 233 LVATGNG--ICVLPEVLFRQWSSEGLRLIAQPL-----RNEPATLELGLIWRRGAKVSAA 285 Query: 304 IVWL 307 I Sbjct: 286 ISAF 289 >UniRef50_Q7NSX8 Probable transcriptional regulator, LysR family n=1 Tax=Chromobacterium violaceum RepID=Q7NSX8_CHRVO Length = 310 Score = 208 bits (531), Expect = 2e-52, Method: Composition-based stats. Identities = 48/311 (15%), Positives = 97/311 (31%), Gaps = 26/311 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNS--PLGLSPT 65 ++L L + + S KAA RI++T A+SK++ +L D L V S S T Sbjct: 1 MNLRNLRYFVAVARHGSFQKAAPRIHLTQPALSKAIQQLEEELDATLLVRSRPGNPASLT 60 Query: 66 PLMVSMEQNLAEWMQMSNLLLDKPHHQ-TPRGLKFELAAESPLMMIMLNALSKQIYQRYP 124 P + + + + +LD + L + + L + RYP Sbjct: 61 PAGELVLRRAERLLSENAAMLDDLARLKRQPQGELRLGLPPLAGIPQVARLLQTFRARYP 120 Query: 125 QATIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVW 183 ++L + +A+ RG++++ + +D ++ Sbjct: 121 LVQLRLFERGGCEQEEAVLRGDIEVAICLQPQR-----------PELDSLLICEHPLRFA 169 Query: 184 LRKDHPALHQ-TWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 L HP + + P I + + Q+ G L Sbjct: 170 LPLSHPLAGRASLKPAEVADLPWIRLEGASQVNRMAADAWQQAGLVPETYADSGHLGLCL 229 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 + A LL+ P + + L +L+W + + + Sbjct: 230 SLVAAGCGLLILPEPWLPPHSAD----------IALVPCDDPALSWRLSLIWRRGAALSE 279 Query: 303 KIVWLRETIKN 313 R+ + + Sbjct: 280 PAERWRQLLVD 290 >UniRef50_Q0KB06 Transcriptional regulator, LysR-family n=8 Tax=Proteobacteria RepID=Q0KB06_RALEH Length = 308 Score = 208 bits (531), Expect = 2e-52, Method: Composition-based stats. Identities = 52/313 (16%), Positives = 101/313 (32%), Gaps = 25/313 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 LD+ L + ++ V +AA+R++++ S +S+ +A+L LF S + T Sbjct: 2 LDIRQLHYFVAVAEDEHVGRAAERLHISQSPLSRQIAQLEEKLGLVLFERSQQRIRLTRD 61 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQ-TPRGLKFELAAESPLMMI-MLNALSKQIYQRYPQ 125 + ++ +N L + M +L +++ P Sbjct: 62 GRTFLAETRAFLTHANRLESLARRLGRGDEGGLCIGYLEYAMHSGVLPNALRELRDSRPA 121 Query: 126 ATIKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 I L N D L+ + + +DI E ++ + +D + L Sbjct: 122 VHIALYNQQSDVQLEGLRQRSLDIALV--------CEPPPPDDPDLEAAQVLNDPMLLAL 173 Query: 185 RKDHPALH-QTWNLDTFLRYPHI-SICWEQSDT-WALDNVLQELGRERTIAMSLPEFEQS 241 + HP + + D I + E + G TI M E + Sbjct: 174 PEGHPLAKAEQLSPDDLAAQKWIGVMHQETALRHDTFIAACARAGFTPTITMEATEPLAA 233 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 L + A L + T + ++ + E P WHK + Sbjct: 234 LGLVAA--GLGVTTIQQSLRHQA--------PPGVVLHELSWFSYRTPLWAAWHK-VNLR 282 Query: 302 PKIVWLRETIKNL 314 P + R+T+ Sbjct: 283 PLVEIFRKTLLQT 295 >UniRef50_Q15TE0 Transcriptional regulator, LysR family n=4 Tax=Alteromonadales RepID=Q15TE0_PSEA6 Length = 307 Score = 208 bits (531), Expect = 2e-52, Method: Composition-based stats. Identities = 68/321 (21%), Positives = 126/321 (39%), Gaps = 22/321 (6%) Query: 1 MKKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPL 60 M + +DLNL L L + QE S+T A KR++++ AVS +L++LR + DPLFV Sbjct: 1 MNMLHSKIDLNLFLILVAVYQEGSITGAGKRLHLSQPAVSHALSRLRDKYQDPLFVRHGR 60 Query: 61 GLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQT--PRGLKFELAAESPLMMIMLNALSKQ 118 + T L ++ + + L + + L I L+ Sbjct: 61 KMIATQLCQTIMPRVLSSVAELESTLHDIGDFDVHQYQREMKFGFRDILESIFFPELATD 120 Query: 119 IYQRYPQATIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFS 177 + P T+ R D A+ +DI ++L+ I + ++ Sbjct: 121 LMANTPNITVHSRQVSRLDMEAALESQALDIVI----------DVLTPTSNDIHHTLICD 170 Query: 178 DVPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPE 237 + + RK HP L +L +++ H + ++ S +D L + R A+ Sbjct: 171 EHFSLICRKGHPILSD-MSLANYIKAEHALVTFKDSAVNTVDMALAKHAVARKFALKCEH 229 Query: 238 FEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKR 297 + + + ++ D L L Y + Q + +V LP P + WHK+ Sbjct: 230 YFAATSVISRCDML-LTMPNAYARLLKQQMPVEVVPLPFEVPIL-------PVHMYWHKQ 281 Query: 298 NSHNPKIVWLRETIKNLYASM 318 H+P W+R+ + + + Sbjct: 282 AEHDPLNSWMRQKLLAIAKRV 302 >UniRef50_D2LJB2 Transcriptional regulator, LysR family n=1 Tax=Rhodomicrobium vannielii ATCC 17100 RepID=D2LJB2_RHOVA Length = 311 Score = 208 bits (531), Expect = 2e-52, Method: Composition-based stats. Identities = 51/317 (16%), Positives = 103/317 (32%), Gaps = 22/317 (6%) Query: 7 TLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSP-LGLSPT 65 + L LL + +VT+AA+++ V+ +VS ++A+L +FV G++ T Sbjct: 2 NISLRLLRYVTAAADSGNVTEAARKLQVSQPSVSAAIAELEQMLGIAIFVRHHAKGVTLT 61 Query: 66 PLMVSMEQNLAEWMQMSNLLLDKPHHQ-TPRGLKFELAAESPLMMIMLNALSKQIYQRYP 124 P + ++ ++ + + L + A+ +RYP Sbjct: 62 PAGQKLIAEARLLLKHADEFSKSAESLGDTERGEVTVGCFPTLAACYMPAIMTDFSKRYP 121 Query: 125 QATIKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVW 183 ++L D + L + G V++GF+ ++P +D VL V Sbjct: 122 LIQLRLAEGDQERLLADVVNGRVELGFTFNY----------AVPSTLDTTVLMKLPFVVC 171 Query: 184 LRKDHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 L DH +L P I +Q + V +G + + FE Sbjct: 172 LPPDHRLAKAPDVSLHDLKDDPMIFFG-DQLIAGYIMRVFDAVGVSPIVRQRIATFEVMR 230 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 + A+ + A ++ + + + + S P Sbjct: 231 GLVARGHGYSVHVATPSSSTSYDGGKVVVKP-------IRDIVPKAEIACVALGAQSMRP 283 Query: 303 KIVWLRETIKNLYASMA 319 + E + A Sbjct: 284 AVRLFAEFLAASLGQPA 300 >UniRef50_B2IHZ5 Transcriptional regulator, LysR family n=2 Tax=Beijerinckiaceae RepID=B2IHZ5_BEII9 Length = 320 Score = 208 bits (531), Expect = 2e-52, Method: Composition-based stats. Identities = 41/309 (13%), Positives = 91/309 (29%), Gaps = 21/309 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L + + +AA+ +++ +S + KL +F + T Sbjct: 17 MNLRDLQYIIAVANFGHFGRAAQACHISQPTLSGQILKLEDELGVRIFERVGKSVCTTAA 76 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHH-QTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + + S LL + P L L ++ + + ++ P Sbjct: 77 GEEILVHARRAVAASEDLLRCARASRDPMAGALRLGVIPTLGPYLMPFVLPRARRQLPAT 136 Query: 127 TIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + L ++ + G++D + + E+LF + + + Sbjct: 137 PLMLVEDFTDRLIEPVLSGKLDAAIIASDPEKPV----------LTSELLFEEPFFLIVP 186 Query: 186 KDHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIA-MSLPEFEQSLF 243 +DH ++ + + + ++ + ++A M L Sbjct: 187 RDHALAERESVAAGEIDPQSLLLLADGHCLRDQAIELCRQAQPDDSLADMRATSLPTLLH 246 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 MAA + P L+A PL L+ N Sbjct: 247 MAAA--GYGITLMPALALLDKHSLPHSLIAKPL-----TGPHTARSVRLVSRSSNPRRKA 299 Query: 304 IVWLRETIK 312 I L + IK Sbjct: 300 IDALAKLIK 308 >UniRef50_Q2CCM2 Transcriptional regulator, LysR family protein n=1 Tax=Oceanicola granulosus HTCC2516 RepID=Q2CCM2_9RHOB Length = 313 Score = 208 bits (531), Expect = 2e-52, Method: Composition-based stats. Identities = 85/321 (26%), Positives = 132/321 (41%), Gaps = 26/321 (8%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 ++ DLNLL L L++ERS T+AA R+ ++ AVS +L +LRA D LF+ GL Sbjct: 1 MNLAGFDLNLLKVLDALLRERSTTRAAARVGLSQPAVSAALGRLRAALGDELFLRRGQGL 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQIY 120 T ++E L E + LL P P F LA +++ L+ ++ Sbjct: 61 VATDFARALEAPLRETLDRLEDLLAAPQEFDPATAKRTFRLAGIDFFAEMLMPQLAARLA 120 Query: 121 QRYPQATIKLRNWDYDSLDA-ITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 P I+L N +A + R E D+ L+ P ++ +LF Sbjct: 121 AAAPGVRIQLLNLVPREYEATLERYEADVAL----------FPLTGSPEWAEHRLLFRSP 170 Query: 180 PCVWLRKDHPAL-----HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMS 234 + +P L T LD F HI + + D+ L +GR+R + MS Sbjct: 171 FVLAAAAGNPRLAHLAEGDTVPLDLFCDLGHILFSLDGNLRAMGDDALAAVGRQRRVVMS 230 Query: 235 LPEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLW 294 + F L A + + L + + L ALP+P + ++W Sbjct: 231 MASFPGILRAVAGSEAVSLVPV-QLARKLQGEMGLRCFALPMPLEPPV-------IGMMW 282 Query: 295 HKRNSHNPKIVWLRETIKNLY 315 H+R+S P WLRE I L Sbjct: 283 HRRSSATPAHAWLREQIVELM 303 >UniRef50_Q0RY04 Transcriptional regulator, LysR family protein n=5 Tax=Rhodococcus RepID=Q0RY04_RHOSR Length = 305 Score = 208 bits (531), Expect = 2e-52, Method: Composition-based stats. Identities = 61/310 (19%), Positives = 107/310 (34%), Gaps = 20/310 (6%) Query: 13 LLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSME 72 + L + ++ SV AA+ + VTPS VS+ LAKL L V G+ T + Sbjct: 7 IRALCAVAEQGSVAAAARSLYVTPSGVSQQLAKLEKEVGVALLVQVGRGVQLTQAGRLLA 66 Query: 73 QNLAEWMQMSNLLLDKPHHQTP-RGLKFELAAESPLMMIMLNALSKQIYQRYPQATIKLR 131 Q + + + + + + + S +++ ++ Q +P + Sbjct: 67 QRGQDIISLLAQAESEVASLDSDVAGELRIGSFSSASRVVVPRAIARMRQLHPGLEVSFV 126 Query: 132 NW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPA 190 D L A+ E+D+ + LP + + DV V L DH Sbjct: 127 AGDTDDLLPAVVGRELDLAVV-----DSWVTMPLHLPEDVICTPIHQDVADVALPADHRL 181 Query: 191 -LHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQPD 249 + LD P + +S L L+ G E I +PEF L A Sbjct: 182 AAAEQIELDEVADMPWTTWRKGESFHTWLVQTLRMRGVEPEIRYEVPEFAAQLEFVAH-- 239 Query: 250 NLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWLRE 309 L A PR + +VA+ L + K N P + + Sbjct: 240 GLAAALIPRLA-RIWVPDDVAIVAV--------HPVLRREIFAVRRKDNDR-PTVRAGID 289 Query: 310 TIKNLYASMA 319 + ++A+++ Sbjct: 290 ALSEVFAAIS 299 >UniRef50_Q0BYJ0 Transcriptional regulator, LysR family n=1 Tax=Hyphomonas neptunium ATCC 15444 RepID=Q0BYJ0_HYPNA Length = 297 Score = 208 bits (531), Expect = 2e-52, Method: Composition-based stats. Identities = 68/315 (21%), Positives = 135/315 (42%), Gaps = 25/315 (7%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 ++ +LDLNLL L+ + ERS+T+A++ +++T AVS +L++LR F+DPLFV G+ Sbjct: 1 MNLRSLDLNLLPVLEAIYAERSLTRASEVLHITQPAVSNALSRLRLHFEDPLFVREGRGV 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDK--PHHQTPRGLKFELAAESPLMMIMLNALSKQIY 120 PT + ++ + E + L+ + F +++ I+ +++++ Sbjct: 61 KPTAMTEALMPAIRESLDKLRNGLEPRSVFEPSRSTRVFNISSRDASAHILAPPIARRLE 120 Query: 121 QRYPQATIK-LRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 + P I + + G +D+ ++ ++ +L S Sbjct: 121 VQAPGVRISWSQPQRSAIASELASGRLDLAI----------DVQDLRGADLERVLLSSTK 170 Query: 180 PCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFE 239 L DHP ++ LD F HI++ + ++ + + LG T LP ++ Sbjct: 171 YVCALASDHPLANEPLTLDKFFSMRHIAVSSRREGRSLIEEMARSLGHRITPVHRLPHYQ 230 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 +L + L A P + L ++ LP F L WH+ + Sbjct: 231 PALEVVRCTHLALAAPQP-----VTEGSGLAVMKLPFDFPSPGSM-------LYWHREYA 278 Query: 300 HNPKIVWLRETIKNL 314 +P ++WLR I+++ Sbjct: 279 QDPALMWLRGLIRDV 293 >UniRef50_Q01QC4 Transcriptional regulator, LysR family n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q01QC4_SOLUE Length = 310 Score = 208 bits (531), Expect = 2e-52, Method: Composition-based stats. Identities = 41/312 (13%), Positives = 99/312 (31%), Gaps = 20/312 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +D + L +++ +S +KAA+ T A+S + +L LF +S T Sbjct: 1 MDFDQLHTFLEIVRLKSFSKAAQTCYRTQPAISAQVRQLEQELRADLFERFGSRISLTTA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTP-RGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + + + + D + +AA + +L + + ++P Sbjct: 61 GKIFSEYAEQMLDLRRRVQDAIAELETNPRGELVIAANEATCIYVLPKVFSEYRSQFPAV 120 Query: 127 TIK-LRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 ++ LR++ ++A+ D G + + ++ D + Sbjct: 121 QLQVLRSYGSRVVEAVMENSADFGLTQLPVEE----------KRLQVVNVYRDEIRLIAP 170 Query: 186 KDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMA 245 HP + + + + L+ L+ + E I+M L E Sbjct: 171 ARHPLASRPVVTAQEVAEHFLVLPKYGKTRTRLNEWLEAVEDEVRISMELDSTEMMKHFV 230 Query: 246 AQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIV 305 L ++ L A+PL + + L++ K + + + Sbjct: 231 IA--GLGVSFMAASNCREEIAAG-KLRAVPL-----GPEPMMRRLGLIYRKDKALSKAAL 282 Query: 306 WLRETIKNLYAS 317 + + + Sbjct: 283 GFIQVVLDNVGE 294 >UniRef50_B0T555 Transcriptional regulator, LysR family n=8 Tax=Alphaproteobacteria RepID=B0T555_CAUSK Length = 317 Score = 208 bits (531), Expect = 2e-52, Method: Composition-based stats. Identities = 45/324 (13%), Positives = 98/324 (30%), Gaps = 33/324 (10%) Query: 9 DLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLM 68 L L L+LL + S ++AA+ +VT +S + +L P+ + G+ T Sbjct: 4 TLRQLQYLKLLSEHGSFSRAAEACHVTQPTLSAGIQELEKILAAPVVDRARSGVILTAAG 63 Query: 69 VSMEQNLAEWMQMSNLLLDKPHHQ-TPRGLKFELAAESPLMMIMLNALSKQIYQRYPQAT 127 + + + L+ P +F L + +L + ++P+ Sbjct: 64 QEAVRRAEAILAQAEDLVQAARGAGQPLAGRFRLGVIPTVAPYLLPRALPALRDQFPKLK 123 Query: 128 IKLRN-WDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRK 186 + LR + + A+ G +D +D+ + D Sbjct: 124 LYLREDLTHRLIAALKSGALDAALIALPYDMT----------GLDWAHVEDDELLAAAPA 173 Query: 187 DHPALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTI--------AMSLPE 237 +H + D+ I + D+ L G E + + Sbjct: 174 NHRMADFDRVDPDSLRGDDMILLEDGHCLR---DHALAACGLEPPRGAGMGDEESFAATS 230 Query: 238 FEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKR 297 + M L ++ P P+ + + W Sbjct: 231 LPTLVQMI--GSGLGVSFLPSMAVAAGLAENA-----PVTIRPLKSDHSSREIVVAWRAG 283 Query: 298 NSHNPKIVWLRETIKNL--YASMA 319 +S + L +T+++L A+++ Sbjct: 284 SSRAAEGRLLAQTLRDLPPAAALS 307 >UniRef50_C0CW60 Putative uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0CW60_9CLOT Length = 306 Score = 208 bits (531), Expect = 2e-52, Method: Composition-based stats. Identities = 42/313 (13%), Positives = 106/313 (33%), Gaps = 32/313 (10%) Query: 7 TLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTP 66 ++ L + + +E+S ++AA+++ ++ ++S+ + F + + ++ T Sbjct: 2 QINPKTLRYILAIAEEKSFSRAAEKLFISQPSLSQHIRNAEKEMGVQFFNRTVIPITLTY 61 Query: 67 LMVSMEQNLAEWMQMSNLLLDKPHH-QTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQ 125 + +++Q+ + L + + + + + ++ L Q YP Sbjct: 62 AGERLVTAARDFLQLEDRLTRELNDIIDSQSGRLIIGTTLTRGTYIIPHLFPAFKQEYPN 121 Query: 126 ATIKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 + +R D +D + +G +D F + V+ D + Sbjct: 122 VELVIREGTNDYLIDLVLKGNIDFAFV------------GESHPDLVSVVMRDDRLLLAA 169 Query: 185 RKDHPALH-------QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPE 237 A +T +L F + P I + EQ+ + +L + G + +A Sbjct: 170 PIGCAAAQTYIAKGKRTVDLCDFAQEPFILLHTEQALRINSNKILTDYGLDPLVAYKTRS 229 Query: 238 FEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKR 297 FE + MA L ++ + F + + P L++ K Sbjct: 230 FETAFRMAEA--GLGCTFVISSKHRASER---------IAFFDFDRGVYSYPLLLVYRKN 278 Query: 298 NSHNPKIVWLRET 310 + + + Sbjct: 279 MYLSKAMKRFLDL 291 >UniRef50_Q2RXK6 Transcriptional regulator, LysR family n=2 Tax=Alphaproteobacteria RepID=Q2RXK6_RHORT Length = 320 Score = 208 bits (531), Expect = 2e-52, Method: Composition-based stats. Identities = 42/307 (13%), Positives = 84/307 (27%), Gaps = 21/307 (6%) Query: 9 DLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFV-NSPLGLSPTPL 67 L L L + + R +AA+ VT S +S + +L L S + TPL Sbjct: 6 TLRQLRYLVTVSETRHFGRAAEICAVTQSTLSAGVQELEGLLGTRLIERRSRRQVVFTPL 65 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQT-PRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + + + L+D + P L + +L L + + Y Sbjct: 66 GEEIVERARAVLADAEALVDAAQAGSLPLVGDLHLGVIPTIGPYVLPRLVPALREAYGGL 125 Query: 127 TIKLR-NWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + LR + L + G +D + L ++ + + Sbjct: 126 RLFLREEQSANLLSLLNAGRIDAALMALP----------YAVGDLPRVELATEEVVLAMP 175 Query: 186 KDHPALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 ++HP ++ + + A + M Sbjct: 176 ENHPLAAFDDIAVEKLESETMLMLEDGHCLREHAMEACHLTRSRGNEAFQATSLSTLVQM 235 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 A + + P +V P+ + LLW + + Sbjct: 236 VAG--GVGVTLMPSIAVPVEARPGSGVVVRPI-----TGARAARTLALLWRPASPRSRDY 288 Query: 305 VWLRETI 311 L + I Sbjct: 289 RLLADAI 295 >UniRef50_A3K4Q2 Probable LysR-family transcriptional regulator n=1 Tax=Sagittula stellata E-37 RepID=A3K4Q2_9RHOB Length = 292 Score = 208 bits (531), Expect = 2e-52, Method: Composition-based stats. Identities = 47/311 (15%), Positives = 103/311 (33%), Gaps = 26/311 (8%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 + +L L + + S+T A++ + V+ A+S SL + PLF + P Sbjct: 1 MQSLSTRHLRVILAIADAGSITAASQDLGVSQPALSASLRQAEEIVGLPLFDRTARRARP 60 Query: 65 TPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNALSKQIYQRY 123 T ++ + + D+ + +A+ + ++ ++ Y Sbjct: 61 TAAGETLIPEARRILSDVDRATDRLRDLAAGRIGQLSIASLPSAVTEIVAPALRRFVSAY 120 Query: 124 PQATIKLRN-WDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCV 182 P + +R+ + + AI GEVD+GF R + +V+ +D Sbjct: 121 PGIRVAVRDALNAEVSRAIRSGEVDLGFGVAGEEER----------DLSADVVRTDSFIA 170 Query: 183 WLRKDHPA-LHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQS 241 L H +T + F + + ++ L G A+ + Sbjct: 171 VLPAGHRLCAQETVSWSDFAAETLVEGAAGSNTRASVRRHLGVEGAG--SAIECSFVPTT 228 Query: 242 LFMAAQPDNLLLATAPRYCQY-YNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 + + + L ++ + + ++ L L +E P ++L Sbjct: 229 IGLVR--NGLGVSVLSELACRPFARDERITLRPL--------LPVVERPISILRRGDRPV 278 Query: 301 NPKIVWLRETI 311 +P E I Sbjct: 279 SPAARLFLEFI 289 >UniRef50_B7RV99 Transcriptional regulator, LysR family protein n=1 Tax=marine gamma proteobacterium HTCC2148 RepID=B7RV99_9GAMM Length = 303 Score = 208 bits (531), Expect = 2e-52, Method: Composition-based stats. Identities = 71/318 (22%), Positives = 131/318 (41%), Gaps = 25/318 (7%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 + +DLNL + L +ERSVT+ A+ +++T AVS +L++LR FDD LFV SP G+ Sbjct: 1 MRLDKVDLNLFVVFDALYRERSVTRVAQALHLTQPAVSNALSRLRQSFDDQLFVRSPRGM 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGL--KFELAAESPLMMIMLNALSKQIY 120 PTP+ ++ ++ + + + P F L ++L L + Sbjct: 61 QPTPVAEAISVDVQKALGLLQKTTLSGQRFDPGSAEMTFRLGMSDVAQNMVLPGLHNALA 120 Query: 121 QRYPQATIKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 Q P TI+ D ++ + G++D+ + + R + L S + Sbjct: 121 QLAPGVTIEAYYLDRASAVAQLKSGDLDLLLDAPQVNAR----------ELGQLHLGSLL 170 Query: 180 PCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFE 239 V + K HP ++D +L H+ + +D L +G R + + + ++ Sbjct: 171 YRVAMAKAHPLAQVDLDIDQYLAAKHVHVSARPRGRGQVDLALHAIGHRRKVVVRVQQYA 230 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 + + AQ D L A +L +V P + L WH+ + Sbjct: 231 VAAAITAQSDLLWTAPGSVI-----DHPELHVVETPFQVESLV-------LNLYWHRSAA 278 Query: 300 HNPKIVWLRETIKNLYAS 317 +P W+R+ + +A Sbjct: 279 EDPANAWMRKMLAQQFAE 296 >UniRef50_Q7MFJ9 Transcriptional regulator n=28 Tax=Vibrio RepID=Q7MFJ9_VIBVY Length = 314 Score = 208 bits (531), Expect = 2e-52, Method: Composition-based stats. Identities = 65/316 (20%), Positives = 128/316 (40%), Gaps = 20/316 (6%) Query: 4 SITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLS 63 ++ ++DLNLL L+ L+ + +++AA+ +N++ AVS++L +LR F DPL V Sbjct: 7 NLRSIDLNLLTILEKLLIHKHISQAAQALNMSQPAVSRALMRLREQFGDPLLVKVNREYR 66 Query: 64 PTPLMVSMEQNLAEWMQMSNL-LLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQR 122 T + + L + L+D F + A MM+++ L + QR Sbjct: 67 LTAKGEYLRRELESSLNTIRQMLVDDAFDPLQYAGVFTIGALDFEMMMIVPKLLARFQQR 126 Query: 123 YPQATIKLRNWDYDS-LDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPC 181 P+ +++ ++ L D+ P + + LF+D Sbjct: 127 APKLKLQIVPYNAYMPLHDYLEKVADLLL----------YSTDDSPTNVFKQRLFNDNYA 176 Query: 182 VWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQS 241 V + ++H +Q L+ + R H+ + +D+ L+ ++R + SLP F Sbjct: 177 VVMCQNHVLANQPMTLERYCRSRHVIVSGNGLGKTDIDHELKRRNQQREVVASLPHFSMV 236 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 + D + R + + +++ + LP + WH + N Sbjct: 237 PELLINTDLIA-TLPRRLVSHLSHRYEITVAELPF-------YTADFQVEQFWHLIHHSN 288 Query: 302 PKIVWLRETIKNLYAS 317 P W+R+ IKN+ Sbjct: 289 PAHQWVRQEIKNMVDE 304 >UniRef50_B1ZUZ0 Transcriptional regulator, LysR family n=2 Tax=Opitutaceae RepID=B1ZUZ0_OPITP Length = 299 Score = 208 bits (530), Expect = 3e-52, Method: Composition-based stats. Identities = 42/311 (13%), Positives = 93/311 (29%), Gaps = 25/311 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +L L+ + + ++ KAA+ + V A+S+++A+L A L + G+ TP Sbjct: 9 FELRHLIYFREVARQLHFRKAAETLAVAQPALSRAIAQLEAALRADLLNRTRRGVEVTPA 68 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + + ++ + + H + +A M +L + +Q Q++P Sbjct: 69 GQLLLERIEPILRGLAAIPAELHALSSGQVGHISIAFTGLAMATVLPGILRQFSQQFPGV 128 Query: 127 TIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 ++L L A+ GE+ GF ++ + L + + L Sbjct: 129 RVELNESPTSTQLAALQAGELSCGFFHPDAPTP----------GLRTHELLRERNGILLP 178 Query: 186 KDHPALHQT-WNLDTFLRYPHISICWEQ--SDTWALDNVLQELGRERTIAMSLPEFEQSL 242 H + L P + + + G I + + Sbjct: 179 PAHRLARKAKLELRDLADTPFVLFPRSHNPGFYDRILAACRAAGITPRIVDEVWPRANGI 238 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 + T + + F E L W +P Sbjct: 239 GLVRAGLGATFMTPSEA----------RHLPGDVAFRTLSGPAPESRLVLGWRTSPEPDP 288 Query: 303 KIVWLRETIKN 313 + + + Sbjct: 289 ALAAFLKVARA 299 >UniRef50_A9ILM0 Transcriptional regulator, LysR-family n=1 Tax=Bordetella petrii DSM 12804 RepID=A9ILM0_BORPD Length = 313 Score = 208 bits (530), Expect = 3e-52, Method: Composition-based stats. Identities = 37/315 (11%), Positives = 88/315 (27%), Gaps = 20/315 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L + + + ++AA R++++ +S+ + L LF + G++ T Sbjct: 1 MELRQLELFIGIAESGAYSRAAMRLSISQPVLSRQIKALEDELGVALFHRTGRGVTLTEA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 +EQ ++ + + + + ++ +L + + YP Sbjct: 61 GALLEQYARGLVETARSAAAAVKAIGGAPSGPVVVGMPASISTVLSVSLIEAFRRAYPGM 120 Query: 127 TIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 ++K L+ + G DI A+ E L +D + Sbjct: 121 SLKFMEGYSGHVLEWLAAGRTDIAVLYDAPRLSI--------PALPTEALLTDELFLLGP 172 Query: 186 KDHPA--LHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 PA R P I +D L +G + M + L Sbjct: 173 ASDPAGVGRGPVPAARLSRIPMILPSRPHGIRVLVDESLDSIGLAPNVEMEIDAMHSMLR 232 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 + + + Q + + + + Sbjct: 233 LVESGLGYAVLSYSCVAAQIAQRR--------MRIWRIVHPTITRTLVIATSTQRPSTHA 284 Query: 304 IVWLRETIKNLYASM 318 + L ++ + Sbjct: 285 VRALGTLLRRQIQDL 299 >UniRef50_C5CZG1 Transcriptional regulator, LysR family n=1 Tax=Variovorax paradoxus S110 RepID=C5CZG1_VARPS Length = 294 Score = 208 bits (530), Expect = 3e-52, Method: Composition-based stats. Identities = 42/309 (13%), Positives = 103/309 (33%), Gaps = 26/309 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +++ L CL + +E +AA+R+N++ VS ++ ++ LF + ++ T Sbjct: 1 MEIRHLRCLIAVAEELHFGRAAQRLNLSQPPVSLAIKEMEEELGVTLFERTSRRIAITRA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHH-QTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 ++ + + L + + S L + +Q +A Sbjct: 61 GDEALRDARAVLLGMDTLRRRAQEAAAGLMGSISIGFISLPAYSFLPRVLRQFSDENERA 120 Query: 127 TIKLRNWDYDS-LDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 I L D + + G +D+G + S S+P ++ ++ D + + Sbjct: 121 EIALWEGTTDQIIGDVESGRLDVGLVLQPS---------SMPASLGSRLVQKDALILAMP 171 Query: 186 KDHPALH-QTWNLDTFLRYPHISICWEQS--DTWALDNVLQELGRERTIAMSLPEFEQSL 242 + HP + + L+ F + A+ G + + + Sbjct: 172 EAHPLVRPGSIALEKFSGERFLGFERHFGPQVFDAIVATCMRRGFSPRL-FPARQMHTIV 230 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 + L +A P + ++ + + + +K + +W K +P Sbjct: 231 SLV--SGGLGVALVPACVKALHREG--------VAYRSLKGEKTYIDTLAVWRK-ADDSP 279 Query: 303 KIVWLRETI 311 + L + Sbjct: 280 LVRALLALL 288 >UniRef50_Q7NE88 LysR family transcriptional regulatory protein n=1 Tax=Gloeobacter violaceus RepID=Q7NE88_GLOVI Length = 298 Score = 208 bits (530), Expect = 3e-52, Method: Composition-based stats. Identities = 45/318 (14%), Positives = 95/318 (29%), Gaps = 27/318 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 + L L + + T+AA+ +++T AVS ++A L + PLF + Sbjct: 1 MTLEQLRIFIAVAEHLHFTRAAQTLHLTQPAVSAAIASLEGEYAVPLFHRVGRHVELAEA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + + M+ + +AA + L + +Q YP Sbjct: 61 GRLLLEQARKIMKQVEYTQRVLQELKGLERGELFIAASQTIANYWLPIRLHRFHQVYPGI 120 Query: 127 TIKL-RNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 ++L + + + G D+G + + E + D + + Sbjct: 121 QVRLTIDSSPNITRQVLEGSADLGLVEG---------KTEPNAQLTDEEIAGDHLVLIVG 171 Query: 186 KDHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERT---IAMSLPEFEQS 241 + HP + + ++ L+ G + IA+ LP E Sbjct: 172 RSHPWWEKEHITFADLTEVQWVVRETGSGTRVLFEDELELEGIDPHKLPIALELPSGEMI 231 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPL-PFDESQQKKLEVPFTLLWHKRNSH 300 L + L + +L PF LL H++ Sbjct: 232 KA-----------AVEAGAGVAVISELLVTREVKLGTLRTPEGVRLRRPFRLLMHRQRHP 280 Query: 301 NPKIVWLRETIKNLYASM 318 + L ++ + + Sbjct: 281 TKASLALVHSLSEVTQVL 298 >UniRef50_C7QGK1 Transcriptional regulator, LysR family n=1 Tax=Catenulispora acidiphila DSM 44928 RepID=C7QGK1_CATAD Length = 298 Score = 208 bits (530), Expect = 3e-52, Method: Composition-based stats. Identities = 41/284 (14%), Positives = 88/284 (30%), Gaps = 9/284 (3%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +D+ L L+ L +V+ AA+ + +TPSAVS+ LA L L + T Sbjct: 2 IDVRQLRTLRALADHGTVSAAAEALYLTPSAVSQQLAVLSKSTGCELLERRGRNVVLTEA 61 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQAT 127 + + + +P + +A +M ++ K + + + + Sbjct: 62 ARVLVGHADAVFAQLERAQSELRAISPAPMTVRIAGFPTAVMAVIAPAMKALREAHEEWR 121 Query: 128 IKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRK 186 ++ + +S+ + G VD+ + I L +V + Sbjct: 122 FEIADTESEESVAHLIDGTVDVAVVMAAPNRPLLG-----DPRIRILPLLEEVYVAAVPA 176 Query: 187 DHPA-LHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMA 245 H + L + P + S + + + G + +F +L + Sbjct: 177 GHRLAAAERIGLADLVEEPFVLAAEGLSCHDQVTAICADAGFQPRGRYRATDFSAALALI 236 Query: 246 AQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVP 289 A + + P + LV L + Sbjct: 237 A--NGFGVTLLPTLGVPPLMPEGVVLVPLKEDWPRRVSLIAVRT 278 >UniRef50_UPI0001788193 transcriptional regulator, LysR family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001788193 Length = 295 Score = 208 bits (530), Expect = 3e-52, Method: Composition-based stats. Identities = 47/304 (15%), Positives = 90/304 (29%), Gaps = 25/304 (8%) Query: 14 LCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSMEQ 73 + S+++AA +++T AVS ++ L PLF + G+ T + + Sbjct: 10 RVFYWTARLGSLSRAADHLHITQPAVSHTVKHLEETIGGPLFFRTTKGVKLTSEGDVLFR 69 Query: 74 NLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQIYQRYPQATIKLRN 132 + + + + + + A L L + + YP I++ N Sbjct: 70 YIEQAFGLIEIGEKAIADMHNLHSGEINIGASDTLCKYYLLPHLEYFHAAYPDIRIRITN 129 Query: 133 -WDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCV----WLRKD 187 ++L + G++D G + + + S P D R Sbjct: 130 RTTPETLSLLKEGKIDFGIVHLPASDKQIDFRPSSP--------IHDCLVAGRSYAERAG 181 Query: 188 HPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQ 247 P +L YP + + S +D + G + L E + A Sbjct: 182 LP---NPLSLHDIGNYPLLMLETGGSTRMYVDQYAELQGVKLKPEFELGSIELLVQFARS 238 Query: 248 PDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWL 307 L Y + Q QL V L P E + + + Sbjct: 239 GFGLAFVI-RDYAKDEMQTGQLIEVPLDPPIP-------ERSIGIATLRGIPLSAAAKSF 290 Query: 308 RETI 311 + Sbjct: 291 LALL 294 >UniRef50_Q210Z5 Transcriptional regulator, LysR family n=2 Tax=Alphaproteobacteria RepID=Q210Z5_RHOPB Length = 301 Score = 208 bits (530), Expect = 3e-52, Method: Composition-based stats. Identities = 72/317 (22%), Positives = 138/317 (43%), Gaps = 23/317 (7%) Query: 1 MKKSITT--LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNS 58 M +S + LDLNLL+ L L+ E SV AA R+N++P A+S+ LA++R +DP+ V + Sbjct: 1 MTRSPSRQPLDLNLLVTLDALLSEGSVAGAANRMNLSPPAMSRQLARIRHLMNDPVLVRA 60 Query: 59 PLGLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALS 116 GL TP ++ + + +Q + L+ P F + + + A+ Sbjct: 61 GRGLVATPRAEAVRAQVRQLVQDAEGLVRGNADLDPATIERTFTIRSSDGFVGTFGAAIV 120 Query: 117 KQIYQRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLF 176 + + Q+ P A ++ + +D++ G VD+ ++ + I + LF Sbjct: 121 ELVVQQAPNARLRFVGEGNEDVDSLRDGRVDLDIG----------VIDGMGPEIRLQTLF 170 Query: 177 SDVPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLP 236 D +R DHP +T ++ F+ YPH+S+ +D L G RT+++++ Sbjct: 171 RDRYIGVVRADHPLAQETVTIENFVAYPHVSVSRRGRFEGPVDTALALQGMRRTVSVAVA 230 Query: 237 EFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHK 296 L + ++ D++ + R +Y + + P ++ WH Sbjct: 231 NVADGLSIVSRSDHI-VLLPGRIAAWYRRDFHG------FELPVVTDELP--PISIAWHP 281 Query: 297 RNSHNPKIVWLRETIKN 313 R + WLR ++ Sbjct: 282 RFEKDAAHRWLRTCVRE 298 >UniRef50_C9KL67 Transcriptional regulator, LysR family n=2 Tax=Veillonellaceae RepID=C9KL67_9FIRM Length = 302 Score = 208 bits (530), Expect = 3e-52, Method: Composition-based stats. Identities = 42/312 (13%), Positives = 107/312 (34%), Gaps = 26/312 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +++ + +++E +++ AA+R+++ A+S+ + +L + LF + T Sbjct: 1 MEIKDMRSFYAIVEEGNISHAAQRLDIAQPALSRQMKRLESSLGVQLFERGSRRIRLTDA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQ-TPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + + M + + + + +L + ++L L + ++RYPQ Sbjct: 61 GRVLYSRVEHILGMVDGTVREITEIGSGVAGSIQLGTITTSGALLLPELITEFHRRYPQV 120 Query: 127 TIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 T ++ L+ + ++I + + + + VL ++ V + Sbjct: 121 TYQIWEAEGARILELLDNRVIEIAITRTQVDSKVY----------ESIVLPNEPLVVVMN 170 Query: 186 KDH--PALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 KD A + ++ P I QS ++LG E I Sbjct: 171 KDQIIGASDKEVRMEELRDTPIIIPLRWQSL---FVANCRKLGFEPHIVCVSDSI--VQD 225 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 + ++ A P + L L ++ + W K + + Sbjct: 226 LLLVKMDMGAAILPVSSRTLLTDGNLYYKKL-------VAPEMSTHTVVAWLKNRTLSSS 278 Query: 304 IVWLRETIKNLY 315 L + + ++ Sbjct: 279 SEHLIKLFREMF 290 >UniRef50_Q15VE5 Transcriptional regulator, LysR family n=1 Tax=Pseudoalteromonas atlantica T6c RepID=Q15VE5_PSEA6 Length = 297 Score = 208 bits (530), Expect = 3e-52, Method: Composition-based stats. Identities = 44/315 (13%), Positives = 101/315 (32%), Gaps = 23/315 (7%) Query: 7 TLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTP 66 + L + Q + +AA+++ ++ A+S ++ K+ LF + + +P Sbjct: 2 NVSYRQLQAFIQVAQSATFAEAAQKMFLSQPALSSAIKKMEEQVGGGLFSRTTRKVQLSP 61 Query: 67 LMVSMEQNLAEWMQMSNLLLDKPHH-QTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQ 125 M + K +AA + L A+ ++P Sbjct: 62 EGQDFLPVAIRLMNDWQDAFGDLQQVFSMGRGKLSIAAMPSFAVGHLPAILGAFQSQFPN 121 Query: 126 ATIKLRN-WDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 + + + ++A++ V +GF+ + + +F+D L Sbjct: 122 VKVAVADIVMEQVINAVSEERVALGFTFETEQL----------DGLLFHPMFTDEFIAVL 171 Query: 185 RKDHPALHQ-TWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 K HP Q + + + P I++ + +DN + L + + + Sbjct: 172 PKLHPLSQQSSVTWNALAQSPFIAMNRGSAIRRWVDNHYEALELKVNMVAEASQLATLGQ 231 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 L ++ P CQ Q L + + +L ++ + + + Sbjct: 232 FVEH--GLGVSIVPGLCQQQMQRLGLRCLP-------IEGDRLSKRVGMIKKVQGNMSVS 282 Query: 304 IVWLRE-TIKNLYAS 317 L + IK A Sbjct: 283 AQALWDWVIKQSLAE 297 >UniRef50_Q7NT25 Probable transcription regulator protein n=1 Tax=Chromobacterium violaceum RepID=Q7NT25_CHRVO Length = 310 Score = 208 bits (530), Expect = 3e-52, Method: Composition-based stats. Identities = 70/310 (22%), Positives = 121/310 (39%), Gaps = 20/310 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 L+LNLL L+ L++ R++T++A R+ +T SA+S+ L +LRA F DPL + T Sbjct: 5 LNLNLLRSLEALLETRNLTRSAARLGLTQSAMSRHLVQLRAQFQDPLLLREGQRFVLTER 64 Query: 68 MVSMEQNLAEWMQMSNLLLDKP-HHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + L ++ L P + +F A L ML + ++ + P Sbjct: 65 AEELRLGLKAVLEQVEQLYQPPQFDPSACEREFSFAGSDYLAEYMLPDILDRVLPQAPGM 124 Query: 127 TIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRK 186 +K W D ++ G D+ + +P I + L D P + Sbjct: 125 RLKFIPWQAGRFDLLSDGAADL----------ISTIADEVPDNIYGKSLGQDQPMCVMAD 174 Query: 187 DHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMA 245 +HP + D +L +PH + +D L G R I ++ P F +L + Sbjct: 175 NHPLHDKPALERDDYLAWPHARVSSASDKDGFVDIQLARNGLSRQIRIATPYFVSALSIV 234 Query: 246 AQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIV 305 ++ LLL + + + LP + LLWH R +P Sbjct: 235 SRSQ-LLLTLPEHLAVRFQRQFPVRAKPLPF-------IDYTYRYWLLWHGRADKDPAHR 286 Query: 306 WLRETIKNLY 315 W R + ++ Sbjct: 287 WFRGHVFDVL 296 >UniRef50_C4XLK5 LysR family transcriptional regulator n=2 Tax=Desulfovibrio RepID=C4XLK5_DESMR Length = 299 Score = 208 bits (530), Expect = 3e-52, Method: Composition-based stats. Identities = 32/321 (9%), Positives = 80/321 (24%), Gaps = 39/321 (12%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 + +D+ L + + RS ++A + + ++ +S ++ L + LF + P Sbjct: 1 MVKMDVRRLQAFAKVYELRSFSRAGEELLLSQPTISAHISALEEELETQLFDRLGRTVLP 60 Query: 65 TPLMVSMEQNLAEWMQMSNLLLDKPHHQ-TPRGLKFELAAESPLMMIMLNALSKQIYQRY 123 T + + + + + + ++ L + Y Sbjct: 61 TQAGDVLYRYCTTIFTQLDHAKADIMALSARVAGELVIGGSTIPAHYIIPRLVARYVDAY 120 Query: 124 PQATIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCV 182 P+ + + + + G V +G G + + D V Sbjct: 121 PEVRVDMTGGDTSEIAQKVADGTVHVGIVGAPAPYP----------ELVSLPYLDDALVV 170 Query: 183 WLRKDHPALHQTWNLDT---------FLRYPHISICWEQSDTWALDNVLQELGRERT--- 230 + +L P I L+ + G + Sbjct: 171 VAPA-------SLSLPDMTESGWQDRLAGLPWIMREQGSGTRQTLEASFAKGGMDIRNIS 223 Query: 231 IAMSLPEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPF 290 + + L L +A + E + F Sbjct: 224 PVLVVHSSLAVLECVEA--GLGVAAVSTLAAKTYLERGT------VAGLEVPHLDMRRSF 275 Query: 291 TLLWHKRNSHNPKIVWLRETI 311 ++ H + P + + Sbjct: 276 YVIHHGKRYLFPALRAFLKIC 296 >UniRef50_Q4KFG8 Transcriptional regulator, LysR family n=2 Tax=Pseudomonas fluorescens RepID=Q4KFG8_PSEF5 Length = 288 Score = 207 bits (529), Expect = 3e-52, Method: Composition-based stats. Identities = 43/312 (13%), Positives = 97/312 (31%), Gaps = 26/312 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L ++ + + S+ +AA++++ PS ++ L +L LF GL +P Sbjct: 1 MELTQLKMVKAVARTGSIARAAEQLHCVPSNITNRLKQLEGELGTELFTRVGRGLRISPA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQAT 127 + + + +Q L + L L Q ++RYP+ + Sbjct: 61 GEIFLGYSERILALVDEAKRAVDNQAEPSGLLRLGSIESCAGGRLPPLLAQYHKRYPKVS 120 Query: 128 IKLRNWD-YDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRK 186 ++L + + +D + SLP + VL+ + + Sbjct: 121 VELVTGTWSQLFEELLHQRIDGALVA----------IDSLPAKLQQTVLYHEPLVLISSG 170 Query: 187 DHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAA 246 + + + + AL+N L G I + + Sbjct: 171 NSAPIR---SASDLQHHNLFMWPPGCPYRRALENWLGRHGLNLPITGYA-SWGTIIGCV- 225 Query: 247 QPDNLLLATAPR-YCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIV 305 ++ P + Y+Q L + + +WHK H+ Sbjct: 226 -SVGAGVSLIPEGVLERYSQSANLSVQRFDDLLPVDNRF--------VWHKDVQHHGARD 276 Query: 306 WLRETIKNLYAS 317 + ++ + Sbjct: 277 AFAQLLREQLGA 288 >UniRef50_A6FYP7 Transcriptional regulator, LysR family protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6FYP7_9DELT Length = 312 Score = 207 bits (529), Expect = 3e-52, Method: Composition-based stats. Identities = 85/317 (26%), Positives = 131/317 (41%), Gaps = 18/317 (5%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 + LDLNLL+ +L +ERSVT+AA R+ VT SA+S +L +LR +D L V + G++ Sbjct: 9 LAQLDLNLLVAFDVLAEERSVTRAAARLGVTQSAMSHTLRRLRGVLEDELLVRTRGGMAL 68 Query: 65 TPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQIYQR 122 TP ++ + + L P P F L ++ L L Sbjct: 69 TPRAAALVAPVRTGLTTLQRALADPEGFDPATSERHFRLTGPDLFELLYLPRLIAGFGAS 128 Query: 123 YPQATIKL-RNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPC 181 + ++ L D + GE+D+ + R R + + VL D Sbjct: 129 AGRLSVTLAHVAPRQLADQLETGELDLAITARMLDGREQPAQP----GLMRRVLLRDGWR 184 Query: 182 VWLRKDHPAL--HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFE 239 ++R HPAL +L FL H+ + +D VL E +RT+A+ + F Sbjct: 185 CFVRAGHPALTKRGRLSLPRFLAASHVMVSPTGRGQGIVDVVLAEQDEQRTVAVRVSSFA 244 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 + +AA D +L A P + L VA PLP E + WH+R S Sbjct: 245 TAPVVAASSDLILTA--PASLEAVVGHLGLVCVAPPLPLPEH-------SVDMTWHQRLS 295 Query: 300 HNPKIVWLRETIKNLYA 316 +P WLRE + Sbjct: 296 EDPGHQWLREQLVAATR 312 >UniRef50_D2AWV2 LysR family transcriptional regulator n=3 Tax=Actinomycetales RepID=D2AWV2_STRRD Length = 295 Score = 207 bits (529), Expect = 3e-52, Method: Composition-based stats. Identities = 47/314 (14%), Positives = 87/314 (27%), Gaps = 24/314 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 D+ L L + + S T AA R+N T SAVS+ +A L PLF G+ TP Sbjct: 2 FDIEALRLLDAVARAGSFTGAAARLNYTQSAVSRRIASLEQQAGGPLFDRLARGVRLTPA 61 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 ++ Q+ + D+ + + A + + ++ + + +P+ Sbjct: 62 GETLHQHARVVLNRLARAADELAGIHGGYSGRLRVGAFATANVALVPGALRAFRREFPEV 121 Query: 127 TIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + L + GE+D+ ++ L D V L Sbjct: 122 GLAPVEGPSGGLLRRMREGELDVAVVSDYPSGLPY------DDEVEIIPLVEDELLVALP 175 Query: 186 KDHPALHQ-TWNLDTFLRYPHI-SICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 DH + + +L I + ++ L+ G + + E+ Sbjct: 176 GDHRLAGRESVDLRELREETWIEAPPPGRTTR--LEEACARAGFAPRATVRIAEWTGKFG 233 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 A L + P L P Sbjct: 234 FVAA--GLGITLVPAIAAPAVPPE--------LVLRSLGDLAPHRTVYAA-LPGAPL-PA 281 Query: 304 IVWLRETIKNLYAS 317 L + Sbjct: 282 ARTLVRLLSEAAGQ 295 >UniRef50_A1VMI6 Transcriptional regulator, LysR family n=28 Tax=Bacteria RepID=A1VMI6_POLNA Length = 333 Score = 207 bits (529), Expect = 3e-52, Method: Composition-based stats. Identities = 64/296 (21%), Positives = 104/296 (35%), Gaps = 21/296 (7%) Query: 22 ERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSMEQNLAEWMQM 81 RSVT+AA+++ + VS LA+LR DPLFV +P G+ PTP ++ + E ++ Sbjct: 55 TRSVTRAAEQLGQSQPTVSIWLARLRRQLGDPLFVRTPEGMLPTPRTDALIATVREVLEG 114 Query: 82 SNLLLDKPHHQTPRGLK--FELAAESPLMMIMLNALSKQIYQRYPQATIKLRNWDYDSLD 139 L + P + F + + +L L + PQ ++ D Sbjct: 115 LRRLSESESRFDPATAQRGFRIFMTDASHITLLPRLFSHVRALAPQVRLEAATIDARMAP 174 Query: 140 AITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPALHQTWNLDT 199 A+ GE D+ L+ L + LF HP + + + L Sbjct: 175 ALQSGEGDLALG----------LVPGLEAGFYQQTLFGQDWICLCNARHPRIGEMFTLQD 224 Query: 200 FLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQPDNLLLATAPRY 259 + HI I LD L+ G R + + LP F + + D + Sbjct: 225 YAAEAHIGIVSGTGY-QLLDGALKSQGIARRVLLELPGFLGLAAILSTSDLVA-TLPRHI 282 Query: 260 CQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWLRETIKNLY 315 + L ++ P WH R H+ WLR L+ Sbjct: 283 GETLANAAGLRVLPCPFEIP-------GFTVKQYWHARYHHDAGNRWLRGVCAELF 331 >UniRef50_C1F703 Transcriptional regulator, LysR family n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F703_ACIC5 Length = 306 Score = 207 bits (529), Expect = 4e-52, Method: Composition-based stats. Identities = 41/315 (13%), Positives = 93/315 (29%), Gaps = 22/315 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +DL L +++ER ++AA R++ T AVS+++ KL + LF + + T Sbjct: 1 MDLWQLETFLAVVEERGFSRAATRLHRTQPAVSQTIRKLEEELGEQLFERTSREGTLTSA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + +++ + +AA + +L + + + PQ Sbjct: 61 GELLRSYAERLLRLRAEAQIAIEELQSLERGRLVIAANEYTCLYLLP-VLDEFRRVCPQI 119 Query: 127 TIKL-RNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + + R+ + + V+ G ++SD + Sbjct: 120 GVTVQRSLASRIPEHLLERSVEFGIITFRPDRAQ----------FQATAVYSDGAAFVMS 169 Query: 186 KDHPALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 +HP + ++ + V I + LP E Sbjct: 170 PEHPLARLSEVPIRELGAENFVAHNVASPLRQRIIEVFAVHQTPLNIGVELPSLEAVKRY 229 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 +A P L+ +P+P + + L+ + + Sbjct: 230 V--GLGNGVALVPTLTVEPELRRG-ELIHVPIP-----EIAITRTLWLVQRRGVRISHAG 281 Query: 305 VWLRETIKNLYASMA 319 ++ + A Sbjct: 282 AAFLRVVERIAAERG 296 >UniRef50_A1UYR8 Transcriptional regulator, LysR family n=32 Tax=Burkholderia RepID=A1UYR8_BURMS Length = 313 Score = 207 bits (529), Expect = 4e-52, Method: Composition-based stats. Identities = 76/319 (23%), Positives = 142/319 (44%), Gaps = 22/319 (6%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 ++ ++DLNLL+ L L+ ER VT+A +RI +T AVS +L +LR F D + + +PLG+ Sbjct: 1 MNLRSIDLNLLVILDALLAERQVTRAGQRIGLTQPAVSNALGRLRYVFKDEILMRTPLGM 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQIY 120 TP ++ + + +Q L + +F L +++ L + I Sbjct: 61 ELTPRAKALACPIRQILQQIEELFVPENQFDSFTSDRRFTLRMSDLTELLLPPPLLRNIR 120 Query: 121 QRYPQATIKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 P + + + + D +++A+ G +D+ H P AI +VLF D Sbjct: 121 GTAPHIRMNVMHLNADKTVEALDSGRLDMAVCAGLDH----------PDAISSQVLFQDR 170 Query: 180 PCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFE 239 L + HP ++ L+ F +++ D+ +D +L ++ R IA ++P + Sbjct: 171 LVCVLSRRHPDANRPLTLERFAALDFLNVSINPVDSSLIDTMLADMRFTRRIAFNVPHWL 230 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 M L + + R+ +L + LPL + V +TL WH+R Sbjct: 231 VVPSMLDALP-LAVIMSERHALSLGDS-RLAIRELPLDLE-------PVTWTLYWHRRYD 281 Query: 300 HNPKIVWLRETIKNLYASM 318 ++ WLR I ++ ++ Sbjct: 282 NSVAHEWLRNCITDVVDAI 300 >UniRef50_A9BXG3 Transcriptional regulator, LysR family n=218 Tax=cellular organisms RepID=A9BXG3_DELAS Length = 354 Score = 207 bits (529), Expect = 4e-52, Method: Composition-based stats. Identities = 40/272 (14%), Positives = 89/272 (32%), Gaps = 17/272 (6%) Query: 8 LDLNLLLCLQLLMQER-SVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLS-PT 65 ++ L ++ ++ S+T+ A ++ + VS+ + +L +F+ + L+ T Sbjct: 43 MNFQQLRYVRETVRRGYSLTEVAHTLHTSQPGVSRQIRELEEELGVEIFIRAGKRLTGLT 102 Query: 66 PLMVSMEQNLAEWMQMSNLLLDKPHHQ-TPRGLKFELAAESPLMMIMLNALSKQIYQRYP 124 P ++ + M ++ L + +AA L + + QRYP Sbjct: 103 PPGEALLPIVERLMLEADNLRRVGADFSASEQGRLSIAATHSQARYALPHVVRDFRQRYP 162 Query: 125 QATIKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVW 183 Q + L + + + GE DIG + + + V Sbjct: 163 QVRLHLHQGSPEQVAQMLRSGEADIGVATEALAG---------YEGLVALPCYRWTHGVV 213 Query: 184 LRKDHPAL--HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQS 241 + HP L Q L+ R+P I+ + +D G E + ++ + + Sbjct: 214 VPPGHPLLQSQQALTLEALSRFPIITYEQGYTGRAHIDEAFAREGLEPDVVLTAMDADVI 273 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVA 273 + + + L + Sbjct: 274 KTYVELDMGVGI--VASVALDAERDQGLRTLD 303 >UniRef50_Q5LN55 Transcriptional regulator, LysR family n=4 Tax=Rhodobacterales RepID=Q5LN55_SILPO Length = 331 Score = 207 bits (529), Expect = 4e-52, Method: Composition-based stats. Identities = 79/326 (24%), Positives = 125/326 (38%), Gaps = 28/326 (8%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 + T DLNLL L L+ RS T+A +++ ++ AVS +L++LR DPLF+ L Sbjct: 1 MNFRTFDLNLLRVLDALLSTRSTTRAGQQLGMSQPAVSAALSRLRHALGDPLFIRQGRQL 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGLK--FELAAESPLMMIMLNALSKQIY 120 PT + L + + + LL P L+ +++ L++ + Sbjct: 61 VPTDYAGGLHAPLRDLLGQTEALLAGQPDFDPGAATDSLTLSGSDFYAELLMPRLARHLS 120 Query: 121 QRYPQATIKLRNWDYDS-LDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 P ++L + D+ + ++ + VD+ P ++ L S Sbjct: 121 HVAPGMRVQLVDLVPDNYVQSVGQSAVDMAILPATP----------TPDWVEERRLHSSH 170 Query: 180 PCVWLRKDHP-------ALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIA 232 R DHP A LD F H E D L +GR R + Sbjct: 171 FLAVARADHPEIASAAIAPGAVLPLDLFCSLQHALFSPEGKLHGLGDAALARIGRARQVT 230 Query: 233 MSLPEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTL 292 M+LP F L +Q D + L + + L L P+P V + Sbjct: 231 MTLPVFSGVLNAVSQSDLIAL-IPHQLAESVAPRLGLSLYHPPIPV-------GPVEIMM 282 Query: 293 LWHKRNSHNPKIVWLRETIKNLYASM 318 +WHKR S P WLR+ I L A + Sbjct: 283 VWHKRASTAPAHRWLRDQIAMLMAEL 308 >UniRef50_Q7WNN7 Probable LysR-family transcriptional regulator n=2 Tax=Bordetella RepID=Q7WNN7_BORBR Length = 306 Score = 207 bits (529), Expect = 4e-52, Method: Composition-based stats. Identities = 48/313 (15%), Positives = 107/313 (34%), Gaps = 21/313 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +++ L + +M+ S+T AA+ I+ T +S+ ++ L A D LF+ L T Sbjct: 1 MNVRALEAFRAVMRTGSMTGAARIIHTTQPNISRLVSMLEAELDLKLFIREGNKLHVTDE 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + + + L D G + +A L L + QR+P+ Sbjct: 61 GAAFFKEVEQHYAGLRALKDAARTIKQLGGGRLHIAVAPALSHGFLASAVTAFTQRHPRV 120 Query: 127 TIKLRNWDYDSLDAITRGEV-DIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 T+ +R + ++ + ++ D+G + + ++ E + S L Sbjct: 121 TLSIRTCNSYMVEQLVNSQLCDLGLAAF--------IGHVTEPGLEAERIASIRGVCLLP 172 Query: 186 KDHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 + H + P +SI + +D++ ++ R I + + Sbjct: 173 QAHRLASRDVIHARDLEGEPFVSIARQNGSREHVDSLFEKAKVTRKIEVEAENASTICHL 232 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 AQ L ++ + H L + + + P TLL + + Sbjct: 233 VAQ--GLGVSVLNAVIAEDFRCHGLVVREF--------RPAIHFPITLLRSSHRPRSLLV 282 Query: 305 VWLRETIKNLYAS 317 + + + Sbjct: 283 AAFIDCLGAVLNE 295 >UniRef50_P23841 HTH-type transcriptional regulator xapR n=60 Tax=Enterobacteriaceae RepID=XAPR_ECOLI Length = 294 Score = 207 bits (529), Expect = 4e-52, Method: Composition-based stats. Identities = 46/308 (14%), Positives = 103/308 (33%), Gaps = 24/308 (7%) Query: 9 DLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLM 68 DL LL + +E +AA R+N++ +S + +L LF+ + T Sbjct: 8 DLKLLRYFLAVAEELHFGRAAARLNMSQPPLSIHIKELENQLGTQLFIRHSRSVVLTHAG 67 Query: 69 VSMEQNLAEWMQMSNLLLDKPHHQ-TPRGLKFELAAESPLMMIMLNALSKQIYQRYPQAT 127 + + + +N +L + + EL M + + ++ + P Sbjct: 68 KILMEESRRLLVNANNVLARIEQIGRGEAGRIELGVVGTAMWGRMRPVMRRFLRENPNVD 127 Query: 128 IKLRN-WDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRK 186 + R + + R E+D G + + P L V + + Sbjct: 128 VLFREKMPAMQMALLERRELDAGI---------WRMATEPPTGFTSLRLHESAFLVAMPE 178 Query: 187 DHPALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMA 245 +H T L+ +++ +D L V Q++G + + E + L M Sbjct: 179 EHHLSSFSTVPLEALRDEYFVTMPPVYTDWDFLQRVCQQVGFSPVVIREVNEPQTVLAMV 238 Query: 246 AQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIV 305 + + Y Q++ ++ PL +++ +++ + P +V Sbjct: 239 --SMGIGITL---IADSYAQMNWPGVIFRPLK------QRIPADLYIVY-ETQQVTPAMV 286 Query: 306 WLRETIKN 313 L + Sbjct: 287 KLLAALTQ 294 >UniRef50_Q160L3 Transcriptional regulator, LysR family, putative n=4 Tax=Rhodobacteraceae RepID=Q160L3_ROSDO Length = 311 Score = 207 bits (529), Expect = 4e-52, Method: Composition-based stats. Identities = 52/312 (16%), Positives = 100/312 (32%), Gaps = 22/312 (7%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVN-SPLGLS 63 + L L + + S+ AA ++NV+ ++S ++ +L F PLFV GLS Sbjct: 1 MLRFTLRQLEYFVAVGEMGSIALAADKVNVSSPSISAAINQLEKEFGLPLFVRQHAQGLS 60 Query: 64 PTPLMVSMEQNLAEWMQMSNLLLDKPHHQTP-RGLKFELAAESPLMMIMLNALSKQIYQR 122 PT M + +Q + L+D + + +++ AL +R Sbjct: 61 PTLAGREMLKQAKLVLQNAEGLIDLAADISGNVQGPLSIGGLLTFAQVVVPALRASFERR 120 Query: 123 YPQATIKLRNWD-YDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPC 181 YP + D + R E+D+ + LP + ++ + + P Sbjct: 121 YPDVRVTQHELDQAQIFSMLRRSEIDVALTYDL----------DLPSDLKFQPIATLPPY 170 Query: 182 VWLRKDHPALHQ-TWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQ 240 L DHP + ++ L +P + + S + + G + IA + Sbjct: 171 AILCDDHPLAGRARVSVADLLEFPMVLLDLPFSS-EYFLSFFEATGLKPQIAERTRDMAV 229 Query: 241 SLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 + A + L + L + + L + Sbjct: 230 MRSLVANGFGFSIVNVRPLNDRSPDGKPLRFIPL-------EGDTRPMQLGFLTSSQAES 282 Query: 301 NPKIVWLRETIK 312 I E K Sbjct: 283 VNVIRTFIEHCK 294 >UniRef50_C6B5D0 Transcriptional regulator, LysR family n=1 Tax=Rhizobium leguminosarum bv. trifolii WSM1325 RepID=C6B5D0_RHILS Length = 307 Score = 207 bits (529), Expect = 4e-52, Method: Composition-based stats. Identities = 40/317 (12%), Positives = 96/317 (30%), Gaps = 27/317 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L + +E S+++AA R+N+ + + + L LF P + Sbjct: 1 MELRHLRYFVAVAEEGSISRAAARLNIQQPPLGQQIRDLEYELGLSLFDRHPKKIVLNAA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQ-TPRGLKFELAAESPLMMIML-NALSKQIYQRYPQ 125 + + ++ + ++ + + S + +L L +Q YP Sbjct: 61 GAVFLADARDILKRAGQAVENVRRYHKGEAGQLSVGFTSSASLHVLAPKLLQQFRLSYPL 120 Query: 126 ATIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 I + Y+ + A+ G +D + ++ + VL + V + Sbjct: 121 VKIAVEESETYELILALQEGRIDAALL---------HIDANRFPDLASTVLSEEDMIVAI 171 Query: 185 RKDHPALHQ---TWNLDTFLRYPHISICW--EQSDTWALDNVLQELGRERTIAMSLPEFE 239 HP + L + + L G I + Sbjct: 172 PLGHPLADERLGPITLKMLEGQDVVVYRRPDGPGIFERILQSLDRAGVTPAIVDEVYRIV 231 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 ++ + A + P Q + + AL + + +P + + + Sbjct: 232 AAINLVAGGRG--VTIVPTSMQVLHP-EAIAYRAL------APGQLSPLPLCIAYRRDLK 282 Query: 300 HNPKIVWLRETIKNLYA 316 + + K++ A Sbjct: 283 LS-IVRNFVALTKDIAA 298 >UniRef50_C9CTJ4 LysR substrate binding domain protein n=1 Tax=Silicibacter sp. TrichCH4B RepID=C9CTJ4_9RHOB Length = 301 Score = 207 bits (529), Expect = 4e-52, Method: Composition-based stats. Identities = 39/295 (13%), Positives = 95/295 (32%), Gaps = 25/295 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 + L +L QE +AA+R+N++ +S SL +L L S + T Sbjct: 3 VTFRQLQHFLVLSQELHFGRAAQRLNISQPPLSASLKQLEETLGFQLMDRSNRSVRLTAA 62 Query: 68 MVSMEQNLAEWMQMSNLLLDKP-HHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 ++ A + + ++ ++ L ++ + YP Sbjct: 63 GAVFSEHAARILGQLDAARALAEQQAKGAAGTLTVSFVPSMLFRNLPHALRKFEESYPST 122 Query: 127 TIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + L ++A+ +GE D+GF LP + + ++ + Sbjct: 123 GLDLHEMNTTRQIEALQQGEADVGFIHAVP----------LPPELVSHRIETERLVCCVP 172 Query: 186 KDHPALHQ-TWNLDTFLRYPHISICWEQS--DTWALDNVLQELGRERTIAMSLPEFEQSL 242 + H + ++ + E + + +L+ E + + + Sbjct: 173 RRHRLAGRSRISISEMAGEKVLVFAREFAAHYHDRIVALLRAADVEPYTPYRVQHWFTVV 232 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKR 297 + AQ + ++ P + + + E ++ E ++W+K Sbjct: 233 ALIAQ--GMGISLVPYSLSRSSMA--------DVTYIEIEEAHAEHEVHMIWNKD 277 >UniRef50_C3JI38 Transcriptional regulator, LysR family n=4 Tax=Rhodococcus RepID=C3JI38_RHOER Length = 308 Score = 207 bits (528), Expect = 4e-52, Method: Composition-based stats. Identities = 50/308 (16%), Positives = 99/308 (32%), Gaps = 22/308 (7%) Query: 9 DLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPL-GLSPTPL 67 + L + + +++ AA+R++++PSA+S +L +L L V G+ T Sbjct: 11 TMRQLAAFVAVAETGTISAAAERLHLSPSALSAALTELERALKVQLCVRRRSFGIQLTRT 70 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 ++ +Q + L + L +L ++ + P A Sbjct: 71 GEAVLVRARALLQQAGELESDALGTGGSVSGPIAIGCYPALGPTVLPSMIAGFTRENPDA 130 Query: 127 TIKLRNWDYDSLD-AITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 ++ R + L + GE+D+ + L + L P + L Sbjct: 131 QVEFREDTQNRLQTHLENGELDLAIAYDL----------DLSPQLRTVPLAIREPLIVLG 180 Query: 186 KDHPALH--QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 +HP + +L +P + + S ALD V + G +A FE + Sbjct: 181 AEHPLARSERPIHLPDLAEHPMVLLDAPPSTKHALD-VCRAGGFAPKVAYRTANFETARA 239 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 L + + L +V + V L WH+ + Sbjct: 240 FV--GRGLGWTLLLQRPKIDVTYEGLEVVVKTIASPA----VPSVHVVLAWHQNTRLSRV 293 Query: 304 IVWLRETI 311 E + Sbjct: 294 ARAFIEFV 301 >UniRef50_C8X447 Transcriptional regulator, LysR family n=1 Tax=Desulfohalobium retbaense DSM 5692 RepID=C8X447_DESRD Length = 304 Score = 207 bits (528), Expect = 4e-52, Method: Composition-based stats. Identities = 54/311 (17%), Positives = 102/311 (32%), Gaps = 22/311 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +D L + ERS +KAA+ + +T VS +++L + LF P + PT Sbjct: 3 MDSRRLEVFSFVYSERSFSKAAQALCLTQPTVSAHISELEQYLGTRLFDRLPRKIVPTAA 62 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 ++ + + R + L + +L L + QRYP+ Sbjct: 63 ARTLYTYTQQIQGLLKEAEASVWALENRIVGQLLLGGSTIPAEYLLPDLLGRFVQRYPEV 122 Query: 127 TIKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + L+ D ++ +A+ GE++ G G + + + R Sbjct: 123 RLDLQVGDSRTITEAVRTGELEAGVVGGRYSESELAYSPYIKDEL---------LVLAGR 173 Query: 186 KDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERT---IAMSLPEFEQSL 242 A ++D R P + AL + L+ G + L L Sbjct: 174 HTDVAKSGPLSMDQLSRLPWVLREPGSGTRRALRHALKRSGLRLEDLSVRAVLGSTGALL 233 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 + + + R LV +P+P + E F L+ H+ S +P Sbjct: 234 RAVRG--GVGVTVSSRLAAAGMLDRG-ELVHMPVP-----EFVSERDFELVVHRGRSQSP 285 Query: 303 KIVWLRETIKN 313 + + Sbjct: 286 ILQRFIACVAR 296 >UniRef50_D1BHN9 Transcriptional regulator n=2 Tax=Micrococcineae RepID=D1BHN9_SANKS Length = 290 Score = 207 bits (528), Expect = 5e-52, Method: Composition-based stats. Identities = 39/312 (12%), Positives = 84/312 (26%), Gaps = 30/312 (9%) Query: 8 LDL--NLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPT 65 +DL L + +AA+ + V A+S+ + +L LFV + ++ T Sbjct: 1 MDLEPRALRSFLAVADVLHFGRAAETMRVAQPALSQQIRRLERDLGVELFVRTSRSVALT 60 Query: 66 PLMVSMEQNLAEWMQMSN-LLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYP 124 P + + + + ++ S + + L +Q +P Sbjct: 61 PAGRVLRDRARALLAQGEKDAEEVVRVARGEQGRLDVGFVSSALPLGPVRLVQQFRDEHP 120 Query: 125 QATIKLRN-WDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVW 183 + L W L+ + RG++D+ + S+ Sbjct: 121 LVQVHLTEGWTAHLLERLLRGDLDLAIVRDPDPM----------DGVRLTPFHSERYVAA 170 Query: 184 LRKDHPALHQ-TWNLDTFLRYPHISICWEQSDTWALDNVL--QELGRERTIAMSLPEFEQ 240 + H + + P + N+ G + + Sbjct: 171 VPSGHRLAGRSSVRGPELAGDPFVFFPPGAGALATARNLAPVVAGGVVPEVVQEASSWTT 230 Query: 241 SLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 L + A + +A P + + P TL W R Sbjct: 231 LLHLVAAGIGVTVAPVSALLGA------------PDEVVTLELEGDHEPSTLAWASRADD 278 Query: 301 N-PKIVWLRETI 311 P + + + Sbjct: 279 TRPVLRRFMDAV 290 >UniRef50_B7V4S2 Probable transcriptional regulator n=7 Tax=Pseudomonas aeruginosa RepID=B7V4S2_PSEA8 Length = 304 Score = 207 bits (528), Expect = 5e-52, Method: Composition-based stats. Identities = 68/316 (21%), Positives = 120/316 (37%), Gaps = 20/316 (6%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 + +DLNLL+ L L+ ER V++AA+R+ ++ AVS +L +LR F DPL V + Sbjct: 5 HDLRRIDLNLLVVLDALLSERHVSRAAQRLAMSQPAVSHALGRLRELFGDPLLVRVKSRM 64 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLL-DKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQ 121 T L + + L + ++ F L ++L AL +Q Sbjct: 65 QLTSLALELAPKLQASLDQVRGVIGGPTFEPVRSRRHFRLGMSDYGAWVVLPALLRQQQA 124 Query: 122 RYPQATIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 P + + ++ + G++D LP + LF + Sbjct: 125 LAPGVSFGIVQEPRLETARQVAEGQLDCALGVFP----------LLPEGVRARRLFEERF 174 Query: 181 CVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQ 240 R+ +LD +L H+ + + + +D+ L++ G R +A++LP F Sbjct: 175 VCVCRRSLFDRPDGLSLDRYLAARHVRVSLQDNPAEEVDSALEKRGLRRQVALTLPHFTV 234 Query: 241 SLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 + + A D + L A R + +L L PL + +W Sbjct: 235 APALLAGTDLV-LTIAERTLERLRLPEELALCEPPLAIP-------RFDYVQIWRGDAER 286 Query: 301 NPKIVWLRETIKNLYA 316 WLRE I+ Sbjct: 287 EAAGAWLREQIQAAAR 302 >UniRef50_A4F8I8 LysR-family transcriptional regulator n=2 Tax=Pseudonocardiaceae RepID=A4F8I8_SACEN Length = 308 Score = 207 bits (528), Expect = 5e-52, Method: Composition-based stats. Identities = 42/301 (13%), Positives = 88/301 (29%), Gaps = 24/301 (7%) Query: 13 LLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSME 72 L L+ + E +T+AA+++ + S++LA+L P+ G+ T + Sbjct: 22 LALLRAVASEGHLTRAAEQLGIPQPTASRTLARLSDEIGAPVIAPHGRGIRLTRTGRLLA 81 Query: 73 QNLAEWMQMSNLL-LDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQATIKLR 131 + ++ + +P + L + + ++ AL + +PQ L Sbjct: 82 SAATDALRSLEAGCREVVEEISPERGQVVLGFQHTMGGTLVPALIRGFRADHPQVRFGLA 141 Query: 132 NWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPA 190 D L + G +D A+++ L ++ L H Sbjct: 142 QGARVDMLAGMLDGRIDFCLISPPPD---------PDPALEWVPLRAEPLLAVLHTGHRL 192 Query: 191 LHQ-TWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQPD 249 + L + + G +A E + + + A Sbjct: 193 AGRAALALSELADDDFVVTRHGYGLRQIFTELSDRAGFAPRVAFESEEVDTARGLVAA-- 250 Query: 250 NLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWLRE 309 L +A P A+P + L W + P + R+ Sbjct: 251 GLGVALLPPAVPE----------AVPGTVEIPLDPAEHRTICLTWPAHRALPPAVRAFRD 300 Query: 310 T 310 Sbjct: 301 F 301 >UniRef50_A9IDE3 LysR-family transcriptional regulator n=1 Tax=Bordetella petrii DSM 12804 RepID=A9IDE3_BORPD Length = 307 Score = 207 bits (528), Expect = 5e-52, Method: Composition-based stats. Identities = 35/316 (11%), Positives = 92/316 (29%), Gaps = 27/316 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +DL L + +E +AA R+ ++ +S+ + L + L + +S T Sbjct: 2 IDLKRLRYFVAVAEEAHFGRAANRLGISQPPLSEHIQALETSLNAKLLFRTTRSVSLTVE 61 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNALSKQIYQRYPQA 126 ++ ++ + ++ + + + L L L + + R+P Sbjct: 62 GEALLKHARAILHDTDRCQEIVNASRQQNIESLTLGILHAHTYTFLPGLLRSYFARHPAY 121 Query: 127 TIKLRN-WDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + L + + + G +DIG ++ + LFS+ V + Sbjct: 122 RVHLVEYSTTEQVGKLLEGVIDIGLVREPI----------YHPSLRTQRLFSERYAVAVP 171 Query: 186 KDHPALH-QTWNLDTFLRYPHISICWEQSDT---WALDNVLQELGRERTIAMSLPEFEQS 241 +T ++ I + + + + + Sbjct: 172 DTWDIARKKTLSVRDLGGRSIIGYPSHDHRRSTQSLFRDFFHQYAVNPSDRFEVKTMHAA 231 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 L + A + + + ++ E+ L W + + Sbjct: 232 LALVAAGCGFAPVPRSQMVLQLAG----------VAYRPFREPSPELSVGLAWREDK-AS 280 Query: 302 PKIVWLRETIKNLYAS 317 P + + + +A Sbjct: 281 PLVAEFVQLCQTHFAQ 296 >UniRef50_Q46N28 Transcriptional regulator, LysR family n=4 Tax=Burkholderiaceae RepID=Q46N28_RALEJ Length = 302 Score = 207 bits (528), Expect = 5e-52, Method: Composition-based stats. Identities = 45/318 (14%), Positives = 92/318 (28%), Gaps = 31/318 (9%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L + + S+ AA+ I+VT A+S+ + + LF +P GL T Sbjct: 1 MELRHLRYFIAVAEHESIRLAAEHIHVTQPAISRQIHDMEEELGFALFSRTPRGLKLTTA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQ-TPRGLKFELAAESPLMM-IMLNALSKQIYQRYPQ 125 + ++ + L + + ++ P Sbjct: 61 GKAYLRDARAALDRLEAAARAAQRISAGVQGYLRLGFVENSGWDGAVPHVFRRFQAEVPG 120 Query: 126 ATIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 I+L LDA+ G +D GF + L ++ L ++ + + Sbjct: 121 VRIELVPMNTPQQLDALREGSLDGGFIYQYGP---------LEPSLATVPLATNNVVLAV 171 Query: 185 R-----KDHPALHQT-WNLDTFLRYPHISICWE--QSDTWALDNVLQELGRERTIAMSLP 236 H + Q L +P I L Q LG + + Sbjct: 172 PHAWTLPAHDSSRQPTVALRDIAGWPFIIFPRAVYPLYYDRLIGACQSLGVTLDVVQEVS 231 Query: 237 EFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHK 296 L + + + + F + +P + H Sbjct: 232 TEAAVLSLVCAGVGAAIVNSANLGRPPALAR----------FASLSDLSIPMPLVFVHHA 281 Query: 297 RNSHNPKIVWLRETIKNL 314 + +P + ET+ ++ Sbjct: 282 DTT-DPALERFVETVASV 298 >UniRef50_B4EAA1 LysR family regulatory protein n=5 Tax=Burkholderiaceae RepID=B4EAA1_BURCJ Length = 303 Score = 207 bits (528), Expect = 5e-52, Method: Composition-based stats. Identities = 35/314 (11%), Positives = 93/314 (29%), Gaps = 20/314 (6%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 + T + L + + ++K+A +V+ S+++ +L L L + P G+ Sbjct: 1 MN-THITLRQIEYFVSVADTGQISKSANLCSVSQSSMTIALKNLEEAVGVTLLLRHPKGV 59 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPH-HQTPRGLKFELAAESPLMMIMLNALSKQIYQ 121 TP +++ + + + + ++ AL I + Sbjct: 60 RLTPAGERFLRHVQHATTSIDRAVAAAQEEPEQISGHVRIGMTETISAYLMPALMSAISR 119 Query: 122 RYPQATIKLRNWDYDSLD-AITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 R+ + + + ++++ + +DI ++ + YE + Sbjct: 120 RFGNLGVSIVESEREAIETMLVDDRLDIALL--------LVSNTAEVADLKYETILRSPR 171 Query: 181 CVWLRKDHPALHQ-TWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFE 239 +W HP L+ R ++ + ++ + G + M E Sbjct: 172 RLWTHPAHPLQDAHRVTLEDVARENYLLLDMDEHLRT-VGKYWGSYGIAPNVWMQSKSIE 230 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 + A + L + L + +W + + Sbjct: 231 AVRSLVA--LGHGVTILSDLVYRPWSLEGNRISRRNLSV-----TVPTMDVGAVWRRGGA 283 Query: 300 HNPKIVWLRETIKN 313 + L E ++ Sbjct: 284 TSTPCRALLELFRS 297 >UniRef50_C9KKN0 Transcriptional regulatory protein, LYSR family n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KKN0_9FIRM Length = 313 Score = 207 bits (528), Expect = 5e-52, Method: Composition-based stats. Identities = 49/336 (14%), Positives = 105/336 (31%), Gaps = 51/336 (15%) Query: 1 MKKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPL 60 M + + + +++S +KAA+ + +T A+S +++KL A PLF S Sbjct: 5 MHMQ------QDMRYVYEIYRQKSFSKAAQALFITQPALSIAISKLEASLGMPLFDRSTR 58 Query: 61 GLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNALSKQI 119 +S TP Q + + + L + + + + +L + + Sbjct: 59 PISLTPAGRIYLQTIEKTRALEQDLRHQLDDIRALRTGTITIGSSHFINACILPEILTRF 118 Query: 120 YQRYPQATIKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSD 178 +++PQ + L ++ + + E+D+ F ++ +F+D Sbjct: 119 NRKFPQVKLNLLEGSSHAMARMLEQREIDLTF----------SCDEAVIQDFTSTPVFTD 168 Query: 179 VPCVWLRKDHP---------------ALHQ-------TWNLDTFLRYPHISICWEQSDTW 216 + + +D P + + NL F P I + + Sbjct: 169 TILLAVPQDAPCPAHRAQYSLTAADILARRHLAPDCPSVNLRDFAAEPFILLRSGNNLHD 228 Query: 217 ALDNVLQELGRERTIAMSLPEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPL 276 + +E G E TI + L + + +A L Sbjct: 229 RAMHFFREAGIEPTIKIELSQMATASRLAEA--GFAATFLSDRLVTSESH---------L 277 Query: 277 PFDESQQKKLEVPFTLLWHKRNSHNPKIVWLRETIK 312 F + F L + + E +K Sbjct: 278 HFYRLSHPESHRIFHALTSPKRYLPAAVKAFIECLK 313 >UniRef50_A3KIZ0 Putative LysR-family transcriptional regulatory protein n=3 Tax=Streptomyces RepID=A3KIZ0_STRAM Length = 312 Score = 207 bits (528), Expect = 5e-52, Method: Composition-based stats. Identities = 68/317 (21%), Positives = 115/317 (36%), Gaps = 23/317 (7%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 + T DLNL LL + SVT A+ ++VT VS SL KLR F D LF + GL+P Sbjct: 1 MGTFDLNLARVFVLLYETGSVTATAETLHVTQPTVSYSLGKLRRHFGDELFRRNGRGLTP 60 Query: 65 TPLMVSMEQNLAEWMQMSNLLLD--KPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQR 122 T + + L + + + +F +A +L L +R Sbjct: 61 TAGARRLYEPLQRALAEIDGTVRQGDAFDAGTMSGRFTIALSDLGEATLLPRLLAAARER 120 Query: 123 YPQATIKLRNWD-YDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPC 181 P + +R +D D+ + RG++D+ F LF + Sbjct: 121 APGVSFTVRPFDVEDAESQLRRGDLDV-FVATPVITSHLT---------VRIPLFRERYV 170 Query: 182 VWLRKDHPALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQ 240 + + DHP + L H ++ + S A VL G +A+ F Sbjct: 171 LMVAADHPRVRGDEVTLAGLAAEHHATV-FGPSGHVAPRAVLAAHGLLERVAVDATRFSM 229 Query: 241 SLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 ++ Q D + + + + H++ LV LP + L +S Sbjct: 230 LPYLLEQTDLVAI-VPEYVGEVFTASHRVRLVRLPFE-------TQPIEIALYARHESSR 281 Query: 301 NPKIVWLRETIKNLYAS 317 +P WL + + + Sbjct: 282 SPAQRWLVQFMAEVLGE 298 >UniRef50_B8H865 Transcriptional regulator, LysR family n=1 Tax=Arthrobacter chlorophenolicus A6 RepID=B8H865_ARTCA Length = 306 Score = 206 bits (527), Expect = 6e-52, Method: Composition-based stats. Identities = 47/321 (14%), Positives = 97/321 (30%), Gaps = 27/321 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 L L + +E AA+R+N+T +S+ + L + LF + + T Sbjct: 2 FSLPQLEAFVAVAEELHFGAAAERLNMTQPPLSRQIQMLEKKLNTTLFSRTSRKVELTAA 61 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQ-TPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 ++ + + M + + + + L + ++ + P Sbjct: 62 GATLLPRARQILDMCIKTDMDVRRVSSGQAGTITVGYTAIAGQSALPMMLRKAAEGMPGV 121 Query: 127 TIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + LR D +D + +G VDIG + + L D V + Sbjct: 122 SFVLRELVSTDQMDGLVKGSVDIGLLRPIVARP----------GVVFRPLMQDRLVVAVP 171 Query: 186 KDHPAL-------HQTWNLDTFLRYPHISIC--WEQSDTWALDNVLQELGRERTIAMSLP 236 + P L Q L + R P + + + + G I Sbjct: 172 EGSPVLGNTRIPDGQPLPLGSLDRRPLLMYSTKEARYFHDLVLRLFASAGAHANITQYAS 231 Query: 237 EFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHK 296 + L L + P + + + Q+ V L W++ Sbjct: 232 QVPALLAFVQA--GLGVTLVPASAMAFAPPG---VEFHEIDGRHGMQELNRVDLELAWNE 286 Query: 297 RNSHNPKIVWLRETIKNLYAS 317 + NP ++ L + I ++ Sbjct: 287 E-TANPAVLRLLDLIGESVSA 306 >UniRef50_C8PZE4 Ben operon transcriptional regulator BenM n=1 Tax=Enhydrobacter aerosaccus SK60 RepID=C8PZE4_9GAMM Length = 317 Score = 206 bits (527), Expect = 6e-52, Method: Composition-based stats. Identities = 34/270 (12%), Positives = 83/270 (30%), Gaps = 29/270 (10%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +D++ L ++ + S ++AAK + ++ ++S+ + +L + L ++ T Sbjct: 1 MDISQLTYFVVVAKAGSFSQAAKTLAISQPSLSRHVQQLESELGVELLDRYHRPMTLTAA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRGL--KFELAAESPLMMIMLNALSKQIYQRYPQ 125 + + + + + ++ +L + + QR+P Sbjct: 61 GHFFLAQIEPILLQLEQASELTQRFAQPHRSNHLTIGFVASVLYGLLPEIISTVKQRHPN 120 Query: 126 ATIKLRN-WDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 IKL + A+ G++D+GF + + L + V L Sbjct: 121 LDIKLVEINSEQQMSALKSGDIDVGFGRFRHNDNF----------VQQIFLRHERFVVAL 170 Query: 185 RKDHPALHQT----WNLDTFLRYPHISICWE----------QSDTWALDNVLQELGRERT 230 HP + L I +T L + Sbjct: 171 PMAHPLASRPDDIGIAFKELLEDTLILYHRTPLPLLQNPLLNGETDQLMYLFARHQLSPH 230 Query: 231 IAMSLPEFEQSLFMAAQPDNLLLATAPRYC 260 + + + + +L + A + + P Sbjct: 231 LTTKVRDIQIALGLVAAGEG--ITLVPDSL 258 >UniRef50_C2AM94 Transcriptional regulator, COG0583 n=1 Tax=Tsukamurella paurometabola DSM 20162 RepID=C2AM94_TSUPA Length = 299 Score = 206 bits (527), Expect = 6e-52, Method: Composition-based stats. Identities = 44/313 (14%), Positives = 93/313 (29%), Gaps = 25/313 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L + + + T+AA+R +V SA+S +A L LF + + T Sbjct: 1 MELQQLRYVIATAETLNFTRAAERCHVVQSALSHQIAALERELGARLFDRTNRAVRLTAA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHH-QTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + + D+ + + + + ++ + YP A Sbjct: 61 GEAFLPQARAALAATERAADEVASTLGSVRGTVTVGMIPTFTVFDVVDVLRRYRRAYPDA 120 Query: 127 TIKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 +++R+ + LD + RG +D+ F G + + L + + Sbjct: 121 AVRVRSGASEILLDEVRRGTLDLAFLGVPEGFST--------AGVIARELRFERLVLVAS 172 Query: 186 KDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMA 245 + + L P + + D G R++ + E L + Sbjct: 173 QARGLVG-PLALADLADEPFVDYPAGGAGRAETDLAFAAAGVHRSVPFEVDRSETMLALI 231 Query: 246 AQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIV 305 A + A L V L L+ K +P Sbjct: 232 AAGLCVGTAAL----GTVPDGAGLATVDL--------LDGPTRTQYLVHSK--LLSPAAR 277 Query: 306 WLRETIKNLYASM 318 L + + + Sbjct: 278 ALLSIVDRTLSEV 290 >UniRef50_B3E2N5 Transcriptional regulator, LysR family n=1 Tax=Geobacter lovleyi SZ RepID=B3E2N5_GEOLS Length = 294 Score = 206 bits (527), Expect = 6e-52, Method: Composition-based stats. Identities = 36/311 (11%), Positives = 91/311 (29%), Gaps = 24/311 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 + L L + RS +K + +++ S S+ + L + LF S ++ T + Sbjct: 1 MTLKQLEVFLAVADTRSFSKGGEAVSLAQSTASQHIRALEDELNVRLFDRSASQVALTEV 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + A + + ++ + A + ++ + +P Sbjct: 61 GRLFYDHAAGICRHCSEAVEAVRRFQGLEQATLRVGASTIPAAFLIPDMLGHFSTAWPGV 120 Query: 127 TIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 ++L+ ++ + + V++ G +I+ + + ++ + R Sbjct: 121 RLELQQGDTHEVIRLLQDERVELAVVGGHID----------DDSINMQEVMTERIVLVAR 170 Query: 186 KDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRER---TIAMSLPEFEQSL 242 + + + P + A+D+ LQ+ G + + L E Sbjct: 171 PGLSPVG-ILEYNQLAQLPLVIREAGSGTRTAVDSALQKNGIDPRRLRVVAQLGSSEAVR 229 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 A + L + F L W + S +P Sbjct: 230 RAVLS--GAGAAFVSTLAVGHELADGT------LIELTVSGLTINRSFYLAWRRGKSLSP 281 Query: 303 KIVWLRETIKN 313 + +K Sbjct: 282 AALEFMAMVKR 292 >UniRef50_Q2JPG1 Transcriptional regulator, LysR family n=2 Tax=Synechococcus RepID=Q2JPG1_SYNJB Length = 321 Score = 206 bits (527), Expect = 6e-52, Method: Composition-based stats. Identities = 48/313 (15%), Positives = 94/313 (30%), Gaps = 19/313 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 + L LL +++ S AA+ +T SA+S+ + L PL ++ T Sbjct: 1 MRLELLQAFLNVVETGSFLAAARLSGLTQSAISRQIQALEEAVGAPLLHR-KSPVALTVA 59 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHH-QTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + Q + + + +A L+ L + +Q + YP+ Sbjct: 60 GERLLPHARRICQEWQRAQESIREWLQGQQTELCIAGIHSLIAHQLPPVLQQFCREYPEV 119 Query: 127 TIKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 +++ D +L + G VD+ L + + E L+S+ V + Sbjct: 120 QLRVTALGSDRALKVLRDGLVDVALVMENP-------LMTRGAELVVEPLYSEPIQVLMP 172 Query: 186 KDHPALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 HP + YP + + + L G A+ L + + Sbjct: 173 ATHPLSRYERIPWKVLAEYPQAVFKDGYAMRSLVGSHLARQGLPLKAALELNTLDAFRGV 232 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 Q L+A P L ++ L ++ P I Sbjct: 233 VRQ--GQLIALLPESALVDC------CADPDLQVRPTEPPLLRRQVVMVTTSDRYRIPPI 284 Query: 305 VWLRETIKNLYAS 317 + L Sbjct: 285 RRFLQLAAQLIRQ 297 >UniRef50_B1LW43 Transcriptional regulator, LysR family n=1 Tax=Methylobacterium radiotolerans JCM 2831 RepID=B1LW43_METRJ Length = 300 Score = 206 bits (527), Expect = 6e-52, Method: Composition-based stats. Identities = 36/306 (11%), Positives = 85/306 (27%), Gaps = 22/306 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 DL + +E +AA R+N+T S +S+ + L L + + TP Sbjct: 2 FDLGHARSFVAVAEEMHFGRAATRLNLTQSPLSRQIQMLEQTLGVTLLERTTRAVRLTPA 61 Query: 68 MVSMEQNLAEWMQMSNL-LLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + + L+ + L + + + P+ Sbjct: 62 GRTFLAEAYRVLAAAENAARITRRAARGESGVLRLSFTAASAYRTLPQVVAHVRRTLPEV 121 Query: 127 TIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + L + + A+ D+ + + I L + + + Sbjct: 122 DLVLEEMVSDEQILALGENRTDLAILRPAPVLQDPKSA------IATAPLARERLLLAVP 175 Query: 186 KDHPA-LHQTWNLDTFLRYPHISICWEQSDT--WALDNVLQELGRERTIAMSLPEFEQSL 242 + H + L ++ LD + + G + I + + L Sbjct: 176 RGHRLAAARAPTLRDLDGEAFVTWSPRGGRYFIDLLDRLFEAGGVQPRIVQRVNQVHAML 235 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN- 301 + + +A P + + + P+ + L W N++ Sbjct: 236 ALV--GAGIGVALVPGSARGNSMAD---IRLRPIALPAATGP----ELWLAWRSDNANPC 286 Query: 302 -PKIVW 306 P + Sbjct: 287 LPSVRA 292 >UniRef50_B9Z7Z3 Transcriptional regulator, LysR family n=3 Tax=Proteobacteria RepID=B9Z7Z3_9NEIS Length = 324 Score = 206 bits (527), Expect = 6e-52, Method: Composition-based stats. Identities = 73/315 (23%), Positives = 130/315 (41%), Gaps = 21/315 (6%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 ++T D NLL+ L +L+ E SV +AA+R+ ++PSA+S++LA+LR DPL V + GL P Sbjct: 1 MSTPDFNLLVTLDVLLAEGSVARAARRLRLSPSAMSRALARLRETTGDPLLVRAGRGLVP 60 Query: 65 TPLMVSMEQNLAEWMQMSNLLLDKPH--HQTPRGLKFELAAESPLMMIMLNALSKQIYQR 122 TP + + + +++ +Q + +L T F L + +L ++ + Sbjct: 61 TPRALELREQVSQLVQDAAAVLRPAEKLDLTQLVRTFTLRVGDGFVENFGPSLIARVGEA 120 Query: 123 YPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCV 182 P ++ + G VD+ + + + LF D Sbjct: 121 APGVRLRFMPKSNKDTAPLRDGSVDL---------DTGVVGEGTGPEVRVRALFQDRFIG 171 Query: 183 WLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 +R+ HP + H+ + +D +D L+ +G ER I + F +L Sbjct: 172 VVRQGHPLCQGEITPARYAAGRHVLVSRRGTDKGPVDETLRAIGLEREIMTIVGGFAPAL 231 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 +A D + R+ + ALP P E +LLWH R + Sbjct: 232 ALARATDLVA-TVPERHTGTL--RDGMHSFALPFPAPEI-------TVSLLWHPRMDADL 281 Query: 303 KIVWLRETIKNLYAS 317 WLR ++ + A+ Sbjct: 282 AHRWLRGCVREICAA 296 >UniRef50_A0B0U5 Transcriptional regulator, LysR family n=18 Tax=Proteobacteria RepID=A0B0U5_BURCH Length = 302 Score = 206 bits (527), Expect = 6e-52, Method: Composition-based stats. Identities = 44/315 (13%), Positives = 94/315 (29%), Gaps = 26/315 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L+ L C + +E +AA+R+ +T +S+ + L L S +S T Sbjct: 2 IELHQLRCFVAVAEELHFGRAARRLFMTQPPLSRQIQLLEHALGIALLERSSRQVSLTAA 61 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQT-PRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 ++ ++ S + L + M+ L P Sbjct: 62 GERFLRDARHILEFSARAEQAAQRVAHGGAGRITLGFTAVSAYRMIPVLLAHAAHALPDV 121 Query: 127 TIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 ++LR +DA+ +D GF + + + ++Y ++ + V + Sbjct: 122 DVELREMVSTVQIDALASRMLDAGFVRQRAARQP----------LEYRLVQREPMLVAVA 171 Query: 186 KDHPALH-QTWNLDTFLRYPHISICWEQS--DTWALDNVLQELGRERTIAMSLPEFEQSL 242 + P + D R P I+ + + + GR + + L Sbjct: 172 EGAPLAAYEQIGPDELDRQPFIAYSPNEGKYFHDMISGMFAGAGRLPNYLHYVGQTHTIL 231 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 + L A P + + + F L W N + P Sbjct: 232 GLVRA--GLGAALVPASARELHVDG--------VVFRPLAGVNAAAELYLAWRADNDN-P 280 Query: 303 KIVWLRETIKNLYAS 317 + ++ Sbjct: 281 ALPVFNAMVERFLTE 295 >UniRef50_B5I3M3 Transcriptional regulator n=1 Tax=Streptomyces sviceus ATCC 29083 RepID=B5I3M3_9ACTO Length = 306 Score = 206 bits (527), Expect = 6e-52, Method: Composition-based stats. Identities = 48/316 (15%), Positives = 96/316 (30%), Gaps = 26/316 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +DL L + ++ AA+R+ +T A+S+ ++KL L + +S T Sbjct: 1 MDLRRLRYFLAVAEDLHFGHAAERLGITQPALSQQVSKLEMELGATLIERTSRTVSLTEA 60 Query: 68 MVSMEQNLAEWMQMSNLLL-DKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + L + + G + +L ++I P Sbjct: 61 GRDVLGPLRRCVAAYEEARVVARRAPSSGGGVLRIGFPRGESSTVLTPFLRRIAHGAPGI 120 Query: 127 TIKLRNWD-YDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 ++L + A+ GE+D+GF L + V+ D V + Sbjct: 121 RMELTDVPCERQAVAVREGELDVGFMHLPI----------LEPNLTPLVIRRDRLVVVMP 170 Query: 186 KDHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQEL-GRERTIAMSLPEFEQSLF 243 +HP ++ + P I + L G I + E ++ Sbjct: 171 GNHPCAKDRFVDIRSLEEEPFIGVRLRCPAYTDALGTLARHGGFRPRIEIETNGIEATVS 230 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 M A D L +A P + + + + H+ +P Sbjct: 231 MVA--DRLGVAIVPGAGVQ---------RHPGVAIRDISPAPHRLDLAFVLHQD-QRSPV 278 Query: 304 IVWLRETIKNLYASMA 319 + +R ++ A Sbjct: 279 LRTMRRVVQEASREKA 294 >UniRef50_C3PKA0 Transcriptional regulator, LysR family n=1 Tax=Corynebacterium aurimucosum ATCC 700975 RepID=C3PKA0_CORA7 Length = 298 Score = 206 bits (527), Expect = 6e-52, Method: Composition-based stats. Identities = 47/313 (15%), Positives = 94/313 (30%), Gaps = 26/313 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L + + + V AA + ++ SA+++ + ++ LF S L Sbjct: 1 MNLEDVRGVVAVADHGLVGAAADSLGLSQSALTRRVQRIETAVGASLFERSGRRLRLNAR 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQ-TPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + + D P L L M+ L K R+P Sbjct: 61 GRAFVDHARRMLLSEAAARDAVSRLMDPERGTVRLDFMHSLGTWMVPELLKAYRARHPHV 120 Query: 127 TIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 I+L + +D + GE D+ G + + L + + Sbjct: 121 DIRLHQGAARELVDRVAAGESDLALVGPRPISPGP---------LGWHQLKLQRLGLAVP 171 Query: 186 KDHPALHQ-TWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 + H A + + ++ F P I + LD++ E G + E + Sbjct: 172 EGHWAAGRNSVRMEDFRDEPFIGMLPGYGTRMLLDSLASEAGFSPRLVFESMELTTVAGL 231 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 A L A P L L + + L+W + + P + Sbjct: 232 VAA--GLGSALLP------LDDPYLKARNL-----IPIEPEAYRELGLVWREGDDAPP-V 277 Query: 305 VWLRETIKNLYAS 317 ++ + A Sbjct: 278 EHFKDFVVARTAE 290 >UniRef50_Q20XM0 Transcriptional regulator, LysR family n=1 Tax=Rhodopseudomonas palustris BisB18 RepID=Q20XM0_RHOPB Length = 325 Score = 206 bits (527), Expect = 6e-52, Method: Composition-based stats. Identities = 43/316 (13%), Positives = 91/316 (28%), Gaps = 27/316 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 + + + + ++ KAA+R+ +T A++ ++ L PL T Sbjct: 1 MKIRQIRAFLAVAEDLHFRKAAERLGLTQPALTLAIQALEEEIGVPLLQRDRHDTKLTFA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQ-TPRGLKFELAAESPL-MMIMLNALSKQIYQRYPQ 125 ++ E + + ++ ++ S + L + + +PQ Sbjct: 61 GEVFRGDITEMLASAEQAAERVRRASAGMFNYLKIGFISTATTARFMPRLISEFRRIHPQ 120 Query: 126 ATIKLR-NWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 + L+ + + D L I +D+ F P ++ ++ + + L Sbjct: 121 VELGLQNHVNVDLLAMIESAALDVAFIRLPL---------VTPHRVEIASVYKERHVLLL 171 Query: 185 RKDHPALHQT-WNLDTFLRYPHISICWE--QSDTWALDNVLQELGRERTIAMSLPEFEQS 241 DHP Q + P I + L G TIA + E Sbjct: 172 PADHPLTQQPSLRVRDLQNAPFIMYSRRNAPGYHDLIMRTLNSNGINPTIAQEVGEMYTL 231 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 + + A + +A L + L L + K +S Sbjct: 232 VALVAAGIGIAVAPIS---ARNYNLPGVVLRE--------ASWLPAAEIGLAFRKDDSR- 279 Query: 302 PKIVWLRETIKNLYAS 317 P + Sbjct: 280 PASRLFIDLALRTRRE 295 >UniRef50_A0JQW9 Transcriptional regulator, LysR family n=2 Tax=Arthrobacter RepID=A0JQW9_ARTS2 Length = 294 Score = 206 bits (527), Expect = 6e-52, Method: Composition-based stats. Identities = 43/306 (14%), Positives = 90/306 (29%), Gaps = 27/306 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 + L + +E +AA+R+N+T +S+ + KL L + T Sbjct: 2 FTFDQLAGFIAVAEELHFGRAAERLNMTQPPLSRQIQKLEKTVGAELLERDNRKVRLTAA 61 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQT-PRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + M ++N + + + +L L ++I P Sbjct: 62 GTAFLEEARRLMALANRAPLTAQRIASGSSGLIRIGFTAASGLSILGPLLEKISAGLPGV 121 Query: 127 TIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 I L + + + GE+DIG + + D +L + + Sbjct: 122 DIDLHELVTGEQIAGLQSGELDIGLARPPINGDF----------FDSYLLQRETMVLAAP 171 Query: 186 KDHPA--LHQTWNLDTFLRYPHISICWE--QSDTWALDNVLQELGRERTIAMSLPEFEQS 241 HP L++ D P I +LQ + ++ + Sbjct: 172 SGHPLTELNRHVREDDLKDVPLIMHSPGEASYFYDLAVRMLQIQHA--NVVHTVSQILTM 229 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 + + A +A PR + + L V +W++ ++ Sbjct: 230 VSLVAARRG--VALVPRSTSLLGIQ-GVDFLPLE------GSAHYPVELHAVWNRNITNP 280 Query: 302 PKIVWL 307 L Sbjct: 281 ALSQTL 286 >UniRef50_A0KG94 Transcriptional regulator, LysR family n=5 Tax=Gammaproteobacteria RepID=A0KG94_AERHH Length = 318 Score = 206 bits (527), Expect = 7e-52, Method: Composition-based stats. Identities = 65/318 (20%), Positives = 132/318 (41%), Gaps = 33/318 (10%) Query: 15 CLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSMEQN 74 LM + SVT+AA+ + ++ A+S +L +LR +F DPL V +P G+ PTP + Sbjct: 14 AFDALMAQGSVTRAAETLFISQPAMSHALNRLRTFFGDPLLVRTPQGMLPTPRAQRLHLG 73 Query: 75 LAEWMQMSNLLL--DKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQATIKLRN 132 + + +++ L ++ + +F L + +++ L +++ + P TI++R Sbjct: 74 VQQALRLLEQQLSDEEVFEPSQSKRRFVLCTTDYVECVLIPPLIQRLKRLAPAVTIEIRI 133 Query: 133 WDYDSLDA-ITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPAL 191 +A + GE+D+ +P + E ++ +R D P Sbjct: 134 LRDTLPEAELASGEIDLVLGFD--------EYMQVPGYLGKETWLTEPLAGLVRADLPMA 185 Query: 192 --------------HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPE 237 + +L + PH+ + +LD L+ LG RTI+++ Sbjct: 186 APALAESGDEPAILAERISLAQLIEMPHVFHSPLGTSEASLDRYLKTLGFSRTISVNSQS 245 Query: 238 FEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKR 297 + + + +Q D+LL+ + L + LP + +WH Sbjct: 246 YMSAAAIVSQSDHLLV-LPSMVAELLASHWPLKSLPLPEDVPD-------YHLNCVWHPV 297 Query: 298 NSHNPKIVWLRETIKNLY 315 ++ P +VWL++ +K L Sbjct: 298 HAQQPALVWLKDLMKELV 315 >UniRef50_D2BW38 Transcriptional regulator, LysR family n=19 Tax=Proteobacteria RepID=D2BW38_DICD5 Length = 315 Score = 206 bits (527), Expect = 7e-52, Method: Composition-based stats. Identities = 53/313 (16%), Positives = 97/313 (30%), Gaps = 21/313 (6%) Query: 4 SITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLS 63 + T DL L + + S+TK A ++T SA+SK +A+L D LF+ P GL+ Sbjct: 3 NPTHFDLQSLRLFLQVARIGSLTKTAAHFHMTLSALSKRMAELERTVDCVLFIRMPRGLA 62 Query: 64 PTPLMVSMEQNLAEWMQMSNLLLDKPHHQT-PRGLKFELAAESPLMMIMLNALSKQIYQR 122 T + + + + + + + + A + ++ L QR Sbjct: 63 LTAAGKELVHHARQVVNSVDRMAGEMQDYAVGVRGHVHIWANTSAIIEFLPQELADFLQR 122 Query: 123 YPQATIKLRN-WDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPC 181 +P I L + A+ G+ DIG ++ D Sbjct: 123 HPLVRINLEEKLSETVVTALLTGQADIGIFADNVPSP----------GVEKMPYREDQLV 172 Query: 182 VWLRKDHPALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQ 240 V + HP + L Y + + S L + +E G + + + F+ Sbjct: 173 VLVSPQHPLAGCRDIPFADTLPYDFVGLNDGSSLLKLLQDTAEEYGNLLRLRIQVSSFDA 232 Query: 241 SLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 M L ++ P L + L L Sbjct: 233 VCRMIEA--GLGISILPEGAVRPEILG------VGLHAIRLTDDWATRKLWLGIKSGAIL 284 Query: 301 NPKIVWLRETIKN 313 P+ L ++ Sbjct: 285 QPEAANLLAHLRQ 297 >UniRef50_C5CPN7 Transcriptional regulator, LysR family n=1 Tax=Variovorax paradoxus S110 RepID=C5CPN7_VARPS Length = 299 Score = 206 bits (527), Expect = 7e-52, Method: Composition-based stats. Identities = 47/312 (15%), Positives = 100/312 (32%), Gaps = 20/312 (6%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 + + LL L L R + +AA+ +N++ A +K L +L + LF G+ P Sbjct: 1 MLHVRPRQLLLLARLDTHRHLGRAAEAMNISQPAATKLLQQLEDSLGERLFERLARGMEP 60 Query: 65 TPLMVSMEQNLAEWMQMSNLLLDKPHHQT-PRGLKFELAAESPLMMIMLNALSKQIYQRY 123 TP + + + ++ + + + +L + ++R+ Sbjct: 61 TPYGEILIRYARRVLSDFGSAREEMLALRSGLSGSLRVGSVPGAVPELLAPALVEYHRRH 120 Query: 124 PQATIKLRNWDYDSLDA-ITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCV 182 PQ + + D + A + +G+VD+ + L + V Sbjct: 121 PQVAVSVVVETSDVMQAQLEQGDVDLVLGRLTDSHDEAKY--------ASVPLLGESQVV 172 Query: 183 WLRKDHP-ALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTI-AMSLPEFEQ 240 +R HP T L + + + ++E G + + + Sbjct: 173 VVRAAHPVFERATVTLAEMANWSWVLQPPGSPQRGRFEAAMREAGIQARLDIIETASPIA 232 Query: 241 SLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 + D + +Y +L L V + LP P L+ + + Sbjct: 233 ITALLENSDMAAV-MPASQASHYARLGVLRTVPVELPVRVP-------PICLVTRQDRAL 284 Query: 301 NPKIVWLRETIK 312 +P R + Sbjct: 285 SPAAAQFRRQLL 296 >UniRef50_B7V886 Probable transcriptional regulator n=7 Tax=Pseudomonas RepID=B7V886_PSEA8 Length = 304 Score = 206 bits (527), Expect = 7e-52, Method: Composition-based stats. Identities = 51/305 (16%), Positives = 100/305 (32%), Gaps = 21/305 (6%) Query: 17 QLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSMEQNLA 76 LM+ +++ A+ + T +SK L +L PLF GL PTP +++ + Sbjct: 16 VSLMETGNLSGTARAAHTTQPGLSKWLKELEEDVGAPLFERHARGLRPTPYGMTLFNHAQ 75 Query: 77 EWMQMSNLLLDKPHHQTPRGL-KFELAAESPLMMIMLNALSKQIYQRYPQATIKLRNWDY 135 + + L ++ + RYP A ++L Sbjct: 76 RVLTEMERARQNLEAMRSGSGSRVLLGTSPASAPSLVPRALRAFLGRYPGAQVELLEGTM 135 Query: 136 D-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPALH-Q 193 + L+ + + ++D+ +++ + EVL+S+ V R HP Sbjct: 136 NGLLERLEKRQLDVVVGRLDNYAPRAS--------LRCEVLYSEAIVVMARPGHPLAQAA 187 Query: 194 TWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTI-AMSLPEFEQSLFMAAQPDNLL 252 + + RY I LD L + GR+ + ++ + D L Sbjct: 188 ALDWEDVRRYDWIVWPPGSPIRSKLDMALTQGGRQPPAYRLESSSMLANIELLRGSDMLS 247 Query: 253 LATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWLRETIK 312 + + L L LVA L + + + W + L ++ Sbjct: 248 I----GSARVVEHLAGLGLVAR-LALEIPGEGA----VGMCWRDEPHRDRASEDLLACLR 298 Query: 313 NLYAS 317 A+ Sbjct: 299 EGAAA 303 >UniRef50_A0AXF9 Transcriptional regulator, LysR family n=9 Tax=Burkholderia cepacia complex RepID=A0AXF9_BURCH Length = 329 Score = 206 bits (527), Expect = 7e-52, Method: Composition-based stats. Identities = 48/319 (15%), Positives = 99/319 (31%), Gaps = 18/319 (5%) Query: 4 SITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLS 63 + + L L + + R++ AA+ + VT AVS + +L PL V S G++ Sbjct: 21 DRSPMKLKQLDAFLAVAEHRTIRGAARALGVTQPAVSGIVRELEHELGVPLVVRSVKGIA 80 Query: 64 PTPLMVSMEQNLAEWMQMSNLLLDKPHHQT-PRGLKFELAAESPLMMIMLNALSKQIYQR 122 T + ++ D+ +A + + +L + Sbjct: 81 LTDYGSAFAIRARLIVEEIQRTRDEIEQLRLGTTGSVSIAVSPTVALTILPRAFAAFTRD 140 Query: 123 YPQATIKLRN-WDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPC 181 P AT+ + + L + G +D + P LF Sbjct: 141 LPGATLNVDDALTATDLARLRDGSLDFIVTH------QLSNALPDPDEFASIPLFRTAFA 194 Query: 182 VWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRE-RTIAMSLPEFEQ 240 V R H +L + + + + ++ G + + P F Sbjct: 195 VVARSRHRLARAR-SLRELVDAHWCVPRYGEGGDDLIRSIFMPFGLDVPKRVVHCPSFAA 253 Query: 241 SLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 +L + +Q D L + A + Q + + L P ++ + Sbjct: 254 TLGLVSQTDALGV-FARPLAEVERQSRGIVALNLAEPMPAL-------TVAIVMRRHALL 305 Query: 301 NPKIVWLRETIKNLYASMA 319 P + E +K A+++ Sbjct: 306 TPAALHFIECLKGASATVS 324 >UniRef50_A9FZI9 Transcriptional regulator, LysR family n=6 Tax=Bacteria RepID=A9FZI9_SORC5 Length = 362 Score = 206 bits (526), Expect = 7e-52, Method: Composition-based stats. Identities = 41/309 (13%), Positives = 100/309 (32%), Gaps = 25/309 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L + + +AA++++V+ S +S+ +A+L LFV S G+ + Sbjct: 48 MELRHLRYFIAVAEAEHFGRAAEQLHVSQSPLSRQIAQLEEEIGVELFVPSGRGVKLSAA 107 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLM-MIMLNALSKQIYQRYPQ 125 S + + + L ++ + + L ++L + + R+P+ Sbjct: 108 GRSFLEGARATLARAALAVEDARATAQGRIGTVVVGFDGALADTLLLPEIVQTFRARHPR 167 Query: 126 ATIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 ++LR + + A+ G++ +G+ + VL+ + V + Sbjct: 168 VEVRLRPLPSEEQVAALRDGKISVGYGYHSPEDNPL---------FRFRVLYRERVGVVM 218 Query: 185 RKDHPAL-HQTWNLDTFLRYPHISICW--EQSDTWALDNVLQELGRERTIAMSLPEFEQS 241 K H +T + + + + + + +A + Sbjct: 219 AKSHRLASRRTLRVADLKQERFLWPPRKEGPRLQDDIIAAFRAHDQPLELAHEEASSDVI 278 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 L + A + L L + L + +W + + Sbjct: 279 LMLVASGEGLSLFPESAASTLLAGAVFKRVRDLDVVILGRS----------VWRATDDED 328 Query: 302 PKIVWLRET 310 P + L E Sbjct: 329 PLVRSLLEI 337 >UniRef50_A3X6E2 Transcriptional regulatory protein n=1 Tax=Roseobacter sp. MED193 RepID=A3X6E2_9RHOB Length = 303 Score = 206 bits (526), Expect = 7e-52, Method: Composition-based stats. Identities = 59/321 (18%), Positives = 114/321 (35%), Gaps = 24/321 (7%) Query: 1 MKKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPL 60 M LD L L+L+ S ++AA+ + VT S +S ++ +LR F DPLFV Sbjct: 1 MNPDPFALDFASLRTLRLVYAHGSFSRAAETLGVTQSTISYTMTRLREVFSDPLFVRQGT 60 Query: 61 GLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELA--AESPLMMIMLNALSKQ 118 G+ PT + + E + L + P E+ + +L +++ Sbjct: 61 GMVPTERCGEIVSQVGELIDRFETLTAQ-REFDPAEASVEIGLSCNFYERVTILPHVTRI 119 Query: 119 IYQRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSD 178 + + P +K+ + + R E DI L + Sbjct: 120 LRREAPGIKLKVISSSAQGKQQLLRSESDILIGPIRID----------DSGYYRRSLLRE 169 Query: 179 VPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEF 238 + + +P + +++ F++ P + I + V++ G M +P Sbjct: 170 EYTCVMDRSNPLAEGSLSVEDFVKAPQVVINYGGGFRSRFLVVMEAAGHVPNTVMEVPSP 229 Query: 239 EQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRN 298 + AQ D + +Q+ +V++P PF E+ L W R Sbjct: 230 ANLPDLLAQTDMIATVP-----FRISQMFDDRVVSVPCPFP------AELSIDLYWTART 278 Query: 299 SHNPKIVWLRETIKNLYASMA 319 + W+R I + ++ Sbjct: 279 HVSAPHKWVRSKIAEAASRLS 299 >UniRef50_Q8YZV2 Transcriptional regulator n=2 Tax=Nostocaceae RepID=Q8YZV2_ANASP Length = 305 Score = 206 bits (526), Expect = 7e-52, Method: Composition-based stats. Identities = 68/319 (21%), Positives = 134/319 (42%), Gaps = 22/319 (6%) Query: 4 SITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLS 63 ++++DLNLL+ ++L +ERSVT AA+R+ + A+S +LA+LR F D LF+ + Sbjct: 5 DLSSIDLNLLVTFEVLFEERSVTAAAQRLYLGQPAMSAALARLRILFQDELFIRIGREMQ 64 Query: 64 PTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQIYQ 121 PT + + ++ +Q L+ P F + + ++L L + Q Sbjct: 65 PTAKALEISPGISVALQQIRQTLESSQTFDPTTSKHTFAIGSSDYTSYVVLPKLLEVCRQ 124 Query: 122 RYPQATIKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 P +L ++ DS+ D + + E+ + L + P LF + Sbjct: 125 VAPSIDFRLIGFEKDSVGDLLEQREIHVALG----------LFQNPPRQTRQMPLFEEHF 174 Query: 181 CVWLRKDHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFE 239 R+ HP + ++ +TF R P + D +D VL + +R + ++ P Sbjct: 175 VGLCRRGHPVVTQESMTPETFARLPQALFTLRRDDIGEIDKVLAQYNLQRRVVLTTPHLL 234 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 + + D + + R + L + LP+ + ++LW K Sbjct: 235 ILPTVISSSDLVTV-IPSRLLTPFAYKDTLEIFELPVKTEPWM-------ISMLWSKLTD 286 Query: 300 HNPKIVWLRETIKNLYASM 318 + +WLR+ +K++ + Sbjct: 287 QDQASIWLRQMLKSVCEGI 305 >UniRef50_B1MAP8 Putative transcription regulator, LysR family n=2 Tax=Corynebacterineae RepID=B1MAP8_MYCA9 Length = 289 Score = 206 bits (526), Expect = 7e-52, Method: Composition-based stats. Identities = 42/310 (13%), Positives = 89/310 (28%), Gaps = 23/310 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++++ L L + S TKAA ++V VS + L LF S + T Sbjct: 1 MEIHQLRYLLAVADTSSFTKAAAALHVAQPGVSAQIRLLERELGQDLFDRSGRQVRLTDA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 ++ + + + + + L++L ++ +P Sbjct: 61 GKAVIPYARAALAAVDGVREAADEIGGLIRGHIAFGTVTSHGAD-LSSLLSAFHRDHPAI 119 Query: 127 TIKLRNWD-YDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 +I L + + + G +D + + L + + +D Sbjct: 120 SITLTEAGCEELVAGLREGRLDGAIVALGAQRLAGLGLQVIDDQPLVAAVAADDLL---- 175 Query: 186 KDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMA 245 A +T L + I + L++ + LG +A + + Sbjct: 176 ----ATRRTITLQRLCEHTLICLPTGSGVRSILESECRSLGLSPNVAFEASSPRALVSLV 231 Query: 246 AQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIV 305 Q + + AP Y + + L + L L W P Sbjct: 232 EQGLGIAVVPAP-YVRNRAGVLALDIRP-----------ALRGRLALAWRLDGPVGPAAR 279 Query: 306 WLRETIKNLY 315 E + + Sbjct: 280 AFLERARAVL 289 >UniRef50_A6UB72 Transcriptional regulator, LysR family n=1 Tax=Sinorhizobium medicae WSM419 RepID=A6UB72_SINMW Length = 326 Score = 206 bits (526), Expect = 7e-52, Method: Composition-based stats. Identities = 48/320 (15%), Positives = 115/320 (35%), Gaps = 23/320 (7%) Query: 8 LDL-NL---LLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLS 63 +DL L ++ +E +VT AA+++ ++ A+++S+ +L LF G++ Sbjct: 15 MDLFRHVGLLRSFLMVAREGNVTAAAEKLGISQPALTRSIRRLEDETGFRLFDRHTRGVT 74 Query: 64 PTPLMVSMEQNLAEWMQMSNLLLDKPHHQT-PRGLKFELAAESPLMMIMLNALSKQIYQR 122 PT ++ ++ + + ++ +L +++ Sbjct: 75 PTIYGKALLRHAQLIDTECRFASSELEALRSGHRGQIKIGGGPFWGAALLPRAVARLHSL 134 Query: 123 YPQATIKLRNWDYDSLD-AITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPC 181 P+ + L+ + L + GE+D+ S LS P + + + Sbjct: 135 LPKLQVNLQIGVNNVLHPKLLDGELDLVVSAAPRD------LSQFPEHFRFTRITTIRSQ 188 Query: 182 VWLRKDHP-ALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGR-ERTIAMSLPEFE 239 +++R+ HP + + YP I + + +L++LG IA+ Sbjct: 189 MFVREGHPILAQERIRYEDLANYPWIMYQQDPEIIERVATLLKDLGVNPPRIAIKASSLM 248 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 L + D L AP + + + +P+ ++ P + +H+ Sbjct: 249 AVLELLRSGDFLACLAAPILGV----VQDVGIRPVPID-----REIWSFPAGITYHRAIE 299 Query: 300 HNPKIVWLRETIKNLYASMA 319 + LR+ + + + Sbjct: 300 QSTPFELLRQMLTDEVTKLG 319 >UniRef50_A7ZNW2 Transcriptional regulator, LysR family n=40 Tax=Enterobacteriaceae RepID=A7ZNW2_ECO24 Length = 318 Score = 206 bits (526), Expect = 8e-52, Method: Composition-based stats. Identities = 48/319 (15%), Positives = 102/319 (31%), Gaps = 24/319 (7%) Query: 1 MKKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPL 60 M L L+ L L L ++ ++T A+ +++T A+SK L+ L LF Sbjct: 17 MANWAQKLKLHHLQMLVALGEQGNLTHVARMMHITQPALSKWLSHLEDEIGLTLFERHSK 76 Query: 61 GLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQT--PRGLKFELAAESPLMMIMLNALSKQ 118 GL PT + Q+ + + ++ + ++ Sbjct: 77 GLRPTEGGKLLLQHAQRLINDMERSQHELARFKQGGLVGSLKIGCSP-VATDCVSQAILH 135 Query: 119 IYQRYPQATIKLRN--WDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLF 176 + + P + + L + G VD+ ++Y VL+ Sbjct: 136 LLKEMPTLHLNIEEKVMTP-LLQDLLAGSVDVVVGRIGGRALQLP--------LNYRVLY 186 Query: 177 SDVPCVWLRKDHPALHQTW-NLDTFLRYPHISICWEQSDTWALDNVLQELGRE-RTIAMS 234 ++ C R +HP + + + I ++DN L + G + Sbjct: 187 TEPVCFVARPEHPLAKYAILSWNDLANWRWIVWPTGTPIRISIDNALVDHGVMLPENTIE 246 Query: 235 LPEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLW 294 S + D + + + R Q Y QL ++ LP + + + + W Sbjct: 247 SASMNVSTNLLQSSDMISILSL-RLAQRYASQGQLVILNLP-------KIEQKGSVGVFW 298 Query: 295 HKRNSHNPKIVWLRETIKN 313 + + + ++ Sbjct: 299 RNNETPSYALSQFLHFLQQ 317 >UniRef50_Q390Q2 Transcriptional regulator, LysR family n=6 Tax=Bacteria RepID=Q390Q2_BURS3 Length = 294 Score = 206 bits (526), Expect = 8e-52, Method: Composition-based stats. Identities = 41/285 (14%), Positives = 85/285 (29%), Gaps = 15/285 (5%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +DL L + +E +AA+R+++ A+S + L LF S ++ T Sbjct: 1 MDLRHLRYFLAVAEEGHFGRAAERLHIVQPALSMQIRALEDELGTALFERSTRKVALTDA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKP-HHQTPRGLKFELAAES-PLMMIMLNALSKQIYQRYPQ 125 + ++ + + + L+ + +P+ Sbjct: 61 GRLLVTEARHTLEQAERAKAVVQRAARGETGVVRIGFVGNAVATGRLSDDLIAFHAAWPE 120 Query: 126 ATIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 T+ L +AI G +DIG ++ + + + V + Sbjct: 121 VTLDLHEMAPAAQQEAILAGRLDIG--------YCPAFGTAFDPKLAVRTVGNWAWDVMM 172 Query: 185 RKDHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 H ++ ++ P I + D L + Q LG+ IA + L Sbjct: 173 SDRHALAKQRSVSVAALADEPFIFYAADGDDEGQLAILRQVLGKAPRIAHKVSSTLSVLA 232 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEV 288 + L +A P + L S+ + Sbjct: 233 L--TGAGLGVALVPSPLSRIA-APNIVYRKLAGGVPGSELVAISR 274 >UniRef50_A4SYM5 Transcriptional regulator n=1 Tax=Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 RepID=A4SYM5_POLSQ Length = 311 Score = 206 bits (526), Expect = 8e-52, Method: Composition-based stats. Identities = 50/312 (16%), Positives = 95/312 (30%), Gaps = 20/312 (6%) Query: 9 DLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLM 68 L L L L +E + T+AA+ V S +S L +L L +S TP Sbjct: 6 SLKQLTYLVALAKELNFTRAAESCFVGQSTLSAGLKELEDGLGIHLVERDRQNVSITPAG 65 Query: 69 VSMEQNLAEWMQMSNLLLD-KPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQAT 127 + + + S L++ P L + +L + ++ +R+P Sbjct: 66 QEVLERAKTILAASQDLVEYAGASGKPMTATIRLGVIPTIAPFLLPIVLPEVRKRFPDLK 125 Query: 128 IKLRN-WDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRK 186 I LR + L + ++D + E LF D + R Sbjct: 126 ITLREDLTANLLSRMAEHKLDFALIALPYDTS----------GLLVEELFDDDFWLVARA 175 Query: 187 DHP-ALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMA 245 P + L + + + ++ + M L M Sbjct: 176 GDPALKGKEVTLPAKMAERLLLLEEGHCLREHSLQACKKADIRKAEGMEATSLLTLLQMV 235 Query: 246 AQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIV 305 L +A P + L+ LVA + L+ +H + + Sbjct: 236 ES--GLGIALLPEMAVKSSLLNSTELVA-----KALASPAPKRVIALVARASTAHAQEFI 288 Query: 306 WLRETIKNLYAS 317 L + I+ +++ Sbjct: 289 ALSKCIRERFSA 300 >UniRef50_Q7MCZ8 Transcriptional regulator n=13 Tax=Vibrionaceae RepID=Q7MCZ8_VIBVY Length = 313 Score = 206 bits (526), Expect = 8e-52, Method: Composition-based stats. Identities = 68/297 (22%), Positives = 130/297 (43%), Gaps = 20/297 (6%) Query: 21 QERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSMEQNLAEWMQ 80 +E V++AA R+++T SA+S+ LA+LR DPL V L TP ++ L + + Sbjct: 18 EECHVSRAADRLHITQSAMSRQLAQLRELCSDPLLVREGNRLVATPHAEALRPKLVQLLS 77 Query: 81 MSNLLLD-KPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQATIKLRNWDYDSLD 139 L D + + + L++ + ++ LS+ + ++ P+ T+ R W LD Sbjct: 78 EFEHLFDHQAFNPQDWQGQLVLSSSDYVAQFIVPTLSRVLIEQAPRLTLSYRLWQPQYLD 137 Query: 140 AITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPALHQ-TWNLD 198 ++ + + +L S P + Y + D +R+ HP + +L+ Sbjct: 138 SLLDTGIHLA----------STMLPSPPKELSYTKIGEDYSVCVMRQGHPLSGKAALSLE 187 Query: 199 TFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQPDNLLLATAPR 258 LRY HI + A D+VL++LG+ R IA+ +P F ++ + Q D +++ Sbjct: 188 DMLRYSHIKVTGGGDKDSATDSVLRKLGKTRHIALQVPFFSAAVNVLIQSDYMMV-VPEH 246 Query: 259 YCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWLRETIKNLY 315 + + LP + + L+WH + H+ W+RE + + Sbjct: 247 IAVNLAKSQPICHYPLPFDTEIH-------QYWLMWHPKYDHDSAHRWVREKVTRVM 296 >UniRef50_B0TI97 Transcriptional regulator, lysr family n=2 Tax=Clostridiales RepID=B0TI97_HELMI Length = 321 Score = 206 bits (526), Expect = 8e-52, Method: Composition-based stats. Identities = 46/309 (14%), Positives = 94/309 (30%), Gaps = 23/309 (7%) Query: 12 LLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSM 71 L + ++ + S++ AA+ +++T SAVS+ + L A F LF L T ++ Sbjct: 5 QLAIFKTVVDKGSISLAAQELHMTQSAVSQQILNLEAHFSVKLFDRLHRRLLITTAGKTL 64 Query: 72 EQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQIYQRYPQATIKL 130 E Q+ + T + A + +L L Q +P+ +I + Sbjct: 65 YPFAVELEQLYGRARNAMQELTQDISGLLRIGASMTIGEYLLPKLLVLFRQTHPRVSIAM 124 Query: 131 -RNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHP 189 + + G++D+GF + D + D Sbjct: 125 DVSNSDHITAMVATGQLDLGFIESPDQLPGV---------LTAFPCGGDQLVIVGPADTA 175 Query: 190 ALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRER---TIAMSLPEFEQSLFMAA 246 +L ++ + + LQ G + + M L + Sbjct: 176 DSA-PLSLAELFQHHWVLREPLSGTRRFFEQFLQSRGAQPADLQVVMELGSTQAIKEAVK 234 Query: 247 QPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVW 306 L + R+ Q L + ++ FTL +H+ + Sbjct: 235 A--GLGFSVLSRFAVTEEVAQQ------SLAIIPLAEGPIDRTFTLFYHREKFTTLAVDS 286 Query: 307 LRETIKNLY 315 + I + Sbjct: 287 FLDFILHQV 295 >UniRef50_A7HFD0 Transcriptional regulator, LysR family n=1 Tax=Anaeromyxobacter sp. Fw109-5 RepID=A7HFD0_ANADF Length = 297 Score = 206 bits (526), Expect = 8e-52, Method: Composition-based stats. Identities = 41/303 (13%), Positives = 91/303 (30%), Gaps = 25/303 (8%) Query: 15 CLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSMEQN 74 +++ T+AA I V A+S ++ L A L ++ TP + + Sbjct: 10 YFVEIVRRGGFTRAADAIRVAQPALSSAIRNLEAELGVRLLNRGGRQVTLTPDGRAFLAH 69 Query: 75 LAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQIYQRYPQATIKLRNW 133 E + L + + + +A + L + R+P+ + + Sbjct: 70 AEEILSRVRGLELEMQERQGLVRGELVVALPAMLATYAFPGVLSAFRVRHPRLRLAVETG 129 Query: 134 DYDSLD-AITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPAL- 191 +++ I G VD+G R+ + + Y L D + + HP Sbjct: 130 GARTIEHRIAAGAVDVGIVARD----------GVREDLVYRRLLRDEVVACVARGHPLAG 179 Query: 192 HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQPDNL 251 ++ +++ + P + + ++ G + IA+ L A Sbjct: 180 RRSLSVEQLAKEPLLLFGPGFFQRDLVLAAIEARGLKAQIALESDLVPLLLD--AASRGG 237 Query: 252 LLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWLRETI 311 + T R P S + + + + W + E + Sbjct: 238 GITTVLRMAAESE----------PRVIPLSLRPAVFIEAGIAWKAGAYLSRAARAFVEFV 287 Query: 312 KNL 314 Sbjct: 288 LEA 290 >UniRef50_C1B6M2 Putative LysR family transcriptional regulator n=1 Tax=Rhodococcus opacus B4 RepID=C1B6M2_RHOOB Length = 303 Score = 206 bits (526), Expect = 9e-52, Method: Composition-based stats. Identities = 42/314 (13%), Positives = 93/314 (29%), Gaps = 23/314 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +++ L L + SVT+AA+ +++ AV++ +A L LF S G+ T + Sbjct: 1 MEIRQLKALVAVADTGSVTRAAQVLHLVQPAVTRHIATLEDELGTQLFERSRAGMLLTEV 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + ++ + + + ++ LS I ++P Sbjct: 61 GEQVLERARRALREIERAKEVASTSDHSVSGHVSVGLLPSVARVIGPRLSDAIVSQHPGL 120 Query: 127 TIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 ++L + G VD + + + + + Sbjct: 121 QLQLTVGYAGHLAKWLEGGAVDFAILFDQPMSSA----------FSMDPVAIEDLWAIAP 170 Query: 186 KDH-PALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 L+ L P I +D LG ++ + + + Sbjct: 171 PGSLEDTGAPIPLEHVLSQPMIIPNPPHGLRTLIDVAAARLGITPSVTLETNDATLQRAL 230 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 A D L + P H ++A+P L TL+ + + Sbjct: 231 VA--DKLGWSMLPASMAT-AGAHGDEVIAVP------TTPSLTRTLTLVRPRGR-MSAAE 280 Query: 305 VWLRETIKNLYASM 318 + + + +M Sbjct: 281 AVVHNALLDAVTAM 294 >UniRef50_Q39MH6 Transcriptional regulator, LysR family n=3 Tax=Burkholderiales RepID=Q39MH6_BURS3 Length = 309 Score = 206 bits (526), Expect = 9e-52, Method: Composition-based stats. Identities = 43/313 (13%), Positives = 89/313 (28%), Gaps = 21/313 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +DL L + + +VT+A+ +N+ AVS+ L L LF S G+ TP Sbjct: 1 MDLKQLRAFVTVAETGNVTRASSLLNLVQPAVSRQLRLLEEDMGTELFDRSRHGMQLTPS 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPH-HQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 +M + + + + P + + ++ L+ ++ +RYP Sbjct: 61 GKTMLEYARRILNEVARAKAEIQPTEGPVAGIVSIGLLASTSDLLATRLAGEVARRYPHI 120 Query: 127 TIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 ++L D + G+VD + + + + L + Sbjct: 121 RLRLTIGYAGHLQDWLEAGDVDAALLYGQKETPA----------LHVKALIDESLWAVAA 170 Query: 186 KDHPALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 + L+ R P I Q A+++ E G + + Sbjct: 171 PSAGLSRKRPLPLERVAREPFILPSAPQGLRAAIEHAAAEAGVTLQVFAETNALSVQKEL 230 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 AQ P + L + L + Sbjct: 231 VAQ--GHGWTILPAVGVTQEVERGI------LTAAPLASPGVRRTIVLAAPSSRQATAPV 282 Query: 305 VWLRETIKNLYAS 317 + + + + Sbjct: 283 RCVVAVLLDCVKA 295 >UniRef50_B1J4U2 Transcriptional regulator, LysR family n=2 Tax=Pseudomonas putida RepID=B1J4U2_PSEPW Length = 311 Score = 206 bits (526), Expect = 9e-52, Method: Composition-based stats. Identities = 40/315 (12%), Positives = 93/315 (29%), Gaps = 21/315 (6%) Query: 7 TLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTP 66 +DL L C + + T+AA +N++ S VS+ + +L L + + G++ TP Sbjct: 9 RVDLKQLECFVRVAEFGGFTRAAATLNLSQSVVSRQVRQLELELGQHLLLRNGRGVTLTP 68 Query: 67 LMVSMEQNLAEWMQMSNLLLDKPHHQ-TPRGLKFELAAESPLMMIMLNALSKQIYQRYPQ 125 + ++ ++ + + Q K + + + + +P Sbjct: 69 AGTRLFEHGQGILRQVQVAREDLQEQRDSLTGKVVIGLPPSIARRHTVGIVTAFQKAFPG 128 Query: 126 ATIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 ++ ++ + + + G +D + + +E L S+ + Sbjct: 129 CSLGIKEGLSHSMREWLLLGRLDFALLYNPAQNAQ----------LHFEPLQSEPLWLIG 178 Query: 185 RKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 L T YP I S +++ E + M + + + Sbjct: 179 AAGACLAP-AVPLATLGDYPLIIPSQPHSLRRLIESEAARHHVELNVHMEIDGIPSLIDL 237 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 A A R + V L L + + + + Sbjct: 238 VAA--GAGFAVLSRMALSGS------YVPLGLQSAPIVEPTINTHLFVATTNQRPLTRLA 289 Query: 305 VWLRETIKNLYASMA 319 +K+ A Sbjct: 290 SMTLAVVKHQMRDQA 304 >UniRef50_A0PUR0 Transcriptional regulatory protein (LysR family) n=2 Tax=Mycobacterium RepID=A0PUR0_MYCUA Length = 300 Score = 206 bits (525), Expect = 9e-52, Method: Composition-based stats. Identities = 47/306 (15%), Positives = 93/306 (30%), Gaps = 23/306 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L Q + + ++ A++++ V+ SAVS+++ L A LF Sbjct: 1 MELYQLRYFQAVAECGTLRGASEQLLVSQSAVSRAITLLEAEIGVQLFTRRGRTNELNRY 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNALSKQIYQRYPQA 126 ++ + + +D L L M + L + + R+PQA Sbjct: 61 GQALLVGSRLAQRSVSSAIDNVRELAGVSGGTVALGFLHSLGMQTVPHLIRLHHSRFPQA 120 Query: 127 TIKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 +L L + G D+ S + I ++ LF+ + Sbjct: 121 RFELHQRSGQGVLSDLVSGVTDVSLSFPAAFEGYG--------EIAWQTLFTQQLYAVVS 172 Query: 186 KDHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 DHP + YP + + + + +D G + T A + + Sbjct: 173 TDHPLAGRRLIRFPELAAYPFVVLDRDHTLRRIVDAACARHGIDPTPAFEGTDVGTLRGL 232 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 + + P+ + +L P + W Sbjct: 233 IGANLGVGV--LPQATARPAD----------IIEIAIDDAQLVRPIAIGWIADRCLPSSA 280 Query: 305 VWLRET 310 V RET Sbjct: 281 VAFRET 286 >UniRef50_A5WE98 Transcriptional regulator, LysR family n=2 Tax=Psychrobacter RepID=A5WE98_PSYWF Length = 321 Score = 206 bits (525), Expect = 9e-52, Method: Composition-based stats. Identities = 49/307 (15%), Positives = 99/307 (32%), Gaps = 23/307 (7%) Query: 7 TLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTP 66 + L L + + S T+A+ ++++T SAVS + +L + LF + LS + Sbjct: 2 NITLRQLNAFIHVAETGSFTRASDKMHLTQSAVSGLIKELENTLNVVLFDRTTRQLSLSV 61 Query: 67 LMVSMEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQIYQRYPQ 125 + + + L ++ T LA + A+ Q + YP+ Sbjct: 62 VGHHLLPQARRVLNELTLFENEASSLTSLAQGTVRLAVSQFAASS-MPAVIAQFAKLYPE 120 Query: 126 ATIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 + L + D L I EVD+G + + ++L+ C+ L Sbjct: 121 IKVSLLDCSAEDVLQHIENIEVDLGVGVELNTD-------QNDENLSADLLYELPFCIVL 173 Query: 185 RKDHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRER-TIAMSLPEFEQSL 242 + HP + D L P I++ + + + + A + +L Sbjct: 174 PQAHPLACEPVVKWDDLLGLPLITLN-GPFIDHVTLELSEPMALQIKNAAYKVNFMSTAL 232 Query: 243 FMAAQPDNLLLATA--PRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 M Q + L P + + + L + F + + Sbjct: 233 EMTRQGFGVTLCLPYMPEVIDWISANN--------LVLKCLAEPVKLRKFYIYQRSSRAL 284 Query: 301 NPKIVWL 307 +P Sbjct: 285 SPASKTF 291 >UniRef50_A3U1I2 Regulatory protein, LysR:LysR, substrate-binding n=1 Tax=Oceanicola batsensis HTCC2597 RepID=A3U1I2_9RHOB Length = 313 Score = 206 bits (525), Expect = 1e-51, Method: Composition-based stats. Identities = 48/318 (15%), Positives = 93/318 (29%), Gaps = 27/318 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +DL L L+ + S++KAA V A+S + KL A F PLFV + G+ PT Sbjct: 1 MDLKQLSYFMLIHEHGSISKAASAAGVVQPALSSQIRKLEAEFGVPLFVRTHRGVVPTSA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQ---TPRGLKFELAAESPLMMIMLNALSKQIYQRYP 124 + Q A G + ++ L + + L +P Sbjct: 61 GDRIYQLAASITANIADAKQDLSALVEADQVGGRIKVGFPPSLARGIFSPLMTSFTNDFP 120 Query: 125 QATIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVW 183 + + + + G +D + +++D + Sbjct: 121 NVKVTMMEAFSGTLTEWVIDGRIDFAIGAVPLDVA----------GLRQRKIYTDNIVLI 170 Query: 184 LRKDHPALHQTW---NLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQ 240 P + LD I S + L+E + + Sbjct: 171 --SGQPIAGKQLEPCRLDNIPGLKLILPSEAHSFGAVVRKYLEEGRIVADSTVEVDGASG 228 Query: 241 SLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 + +A D L +C + L + + P+ E + LL+ ++ Sbjct: 229 GIALARSTDWAGLCP---FCAVHGDLRRNQIYVNPIAAPELK-----WDLYLLYDEKRPL 280 Query: 301 NPKIVWLRETIKNLYASM 318 ++ A + Sbjct: 281 TAAAHRFIAMVERELAEL 298 >UniRef50_Q01Z84 Transcriptional regulator, LysR family n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q01Z84_SOLUE Length = 297 Score = 206 bits (525), Expect = 1e-51, Method: Composition-based stats. Identities = 45/317 (14%), Positives = 103/317 (32%), Gaps = 27/317 (8%) Query: 1 MKKSIT-TLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSP 59 M+ + ++L+ L + E+S ++AA+++ T AVS +L +L + L S Sbjct: 1 MESRLAFNMELHSLQVFHAVATEKSFSRAAEKLLRTQPAVSLALQRLEQELGEKLIDRSG 60 Query: 60 LGLSPTPLMVSMEQNLAE---WMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALS 116 L T ++ + + K + A + +L Sbjct: 61 KDLILTDAGRTVLDYARRFQSLQLEMENSIAELRD--NSAGKLTIGANESTTLYLL-KHI 117 Query: 117 KQIYQRYPQATIKL-RNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVL 175 ++ + YP+ +++ R+ + + G +++G + I +V+ Sbjct: 118 EKYRELYPKVKVQVRRSLSSMLPNELLDGNLELGVISYDP----------ADERIKSKVI 167 Query: 176 FSDVPCVWLRKDHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMS 234 F+D + H +T + I+ + Q + + Sbjct: 168 FTDALAFVVSPKHRLANRKTVPITELGSENFIAHNVLSPYRAVVIREFQTHKVPLHMDVE 227 Query: 235 LPEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLW 294 +P E + L +A PR C ++ L ++ +E L++ Sbjct: 228 MPTIETIRKLVQSN--LGVAFLPRMCVEQEIEQKM------LCEVRVKEMHVERKIRLIY 279 Query: 295 HKRNSHNPKIVWLRETI 311 R + E + Sbjct: 280 PTRRGLSHAAKAFLEVV 296 >UniRef50_A6E621 Transcriptional regulator, LysR family protein n=1 Tax=Roseovarius sp. TM1035 RepID=A6E621_9RHOB Length = 295 Score = 206 bits (525), Expect = 1e-51, Method: Composition-based stats. Identities = 47/312 (15%), Positives = 98/312 (31%), Gaps = 30/312 (9%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 + L L + E ++T+AA+ + ++ SAVS +++ L D LF G++ TP Sbjct: 1 MTLEQLRIFVAVATELNMTRAAEVLRLSQSAVSAAISALERRHDVQLFDRVGRGIALTPA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + S + +L A + L + P Sbjct: 61 GAVFLTEAKDILNRSQQAERVLEDLSTLRRGSIQLVASQTVGNYWLPRQLMSFHSSNPDI 120 Query: 127 TIKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + + + D +D IT G+ ++GF ++ + +D + Sbjct: 121 DLSVEITNSDRVMDWITSGKAELGFIESPVTM----------DGLEATHVGTDQMVLIGS 170 Query: 186 KDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRER---TIAMSLPEFEQSL 242 ++ + + + P + L L IA+ LP E Sbjct: 171 RE---IGLQIDRAMLMSLPWVIREEGSGTRAMLLEFLSHYRLTLSDIRIALVLPSNEAIA 227 Query: 243 FMAAQPDNLLLATAPRYCQYY-NQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 D L +A R + Q ++ + P + + T++ + + Sbjct: 228 SAV--SDGLGVALMSRLAAGFLGQSSEIAIRPSP---------QPDRALTMVLSTQRHRS 276 Query: 302 PKIVWLRETIKN 313 + IK Sbjct: 277 SAVQAFVRQIKA 288 >UniRef50_Q5SM20 Transcriptional regulator, LysR family n=4 Tax=Thermaceae RepID=Q5SM20_THET8 Length = 317 Score = 206 bits (525), Expect = 1e-51, Method: Composition-based stats. Identities = 52/319 (16%), Positives = 98/319 (30%), Gaps = 35/319 (10%) Query: 7 TLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTP 66 L L+ L L L +E S T+AA+R+ +T A+S + KL LF + T Sbjct: 2 KLTLDQLRYLVALAEEGSFTRAAERVYLTQPALSVQIRKLEEALGTRLFDR--RKGTLTE 59 Query: 67 LMVSMEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQIYQRYPQ 125 ++ L + F L L +L L ++ RYP+ Sbjct: 60 AGRVAVAQARRVLEEVERLRLLVQGEEACFQGPFRLGVIPTLAPYLLPRLLPELKARYPR 119 Query: 126 ATIKLR-NWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 ++ +R + + G +D G G + E LF++ ++ Sbjct: 120 LSLSVREELTPGIVRGLEEGSLDAGLVG----------TEERHPGLGAEPLFAEAFWAYV 169 Query: 185 RKDHPALHQ------TWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEF 238 HP + L+ + + +V + R++ + Sbjct: 170 APGHPLFEREAVHPLEIPLED----TWVLAE-GHCFRDQVLSVCRPSLGGRSVEFQSGDL 224 Query: 239 EQSLFMAAQPDNLLLATAPRYCQ-YYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKR 297 E + + L P + + L L LL+ + Sbjct: 225 ETLVRLVDAVGGL--TLLPEVALWTLSPAQRTRLRPL-------SPPGAGRTVYLLFREG 275 Query: 298 NSHNPKIVWLRETIKNLYA 316 + P + L E + +A Sbjct: 276 SLKAPLLRALAEEARRAFA 294 >UniRef50_Q03CT2 Fhu operon transcription regulator n=4 Tax=Lactobacillus casei group RepID=Q03CT2_LACC3 Length = 292 Score = 206 bits (525), Expect = 1e-51, Method: Composition-based stats. Identities = 43/306 (14%), Positives = 81/306 (26%), Gaps = 26/306 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L + + + +T AAK++++ +S L L LF G+ T Sbjct: 1 MNLKQITYFLAVAEAGQMTAAAKQLHMAQPPLSYQLKALEDELGVRLFERGSRGVRLTGS 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + ++ + L S ++ + +RYPQ Sbjct: 61 GQQFMTYAQQIVETVAAAENAARRSGEGEIGTLALGLTSSAGDVLPKQKLQAFNRRYPQV 120 Query: 127 TIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 L + LD + R +D+ + + L SD Sbjct: 121 EFALYEDNTYGILDKLRRNILDLAIVRTPFN----------DDGLASCRLSSDHMIAVAA 170 Query: 186 KDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMA 245 P T + + P I + E G IA+ + +L Sbjct: 171 ASQPL-PATLTIPDLKQQPLIVYRR---FSSLFKTTFAEYGITPIIAVLCDDARTALHW- 225 Query: 246 AQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIV 305 + +A P + TL+W HNP + Sbjct: 226 -AQMGMGVALVPATMAALASQQS--------HLAVIDYEPWVTHMTLVWQPEALHNPLVA 276 Query: 306 WLRETI 311 + Sbjct: 277 RFVGQL 282 >UniRef50_B0CAU2 Transcriptional regulator, LysR family n=1 Tax=Acaryochloris marina MBIC11017 RepID=B0CAU2_ACAM1 Length = 291 Score = 206 bits (525), Expect = 1e-51, Method: Composition-based stats. Identities = 44/290 (15%), Positives = 93/290 (32%), Gaps = 27/290 (9%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +DL + + + + ++AA+R+ ++ ++S + KL LF T Sbjct: 1 MDLYQVRYFLTIAETGTFSRAAERLYLSQPSLSAGIKKLEQELGVALFERGGRRTVLTAA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQAT 127 + ++ M L + ++ S L + L L Q Y T Sbjct: 61 GQAFKERATVIMAQYQAALHELKGFN-DRPTLKVGVLSTLRVSELADLVHSFQQHYSHVT 119 Query: 128 IKLRNWDYDSLDA-ITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRK 186 ++L + D+L +T+GE+D+ + ++ +LF+ + + Sbjct: 120 LELYDHPADALQDKLTQGEIDVAITVLGPQDDAQ----------TSTLLFAQPLLLAVPA 169 Query: 187 DHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMA 245 HP +T L P+I +L+ + E + + Sbjct: 170 RHPLAQRTSVRLAELDGQPYIDR-VNCEFFKQECQLLEAKKICPQVVYRASHEEWVISLV 228 Query: 246 AQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWH 295 L L+ P + +V LP+ + + W Sbjct: 229 KA--GLGLSVMPFW------RGLTDIVYLPV-----VDIDFQRRVGIKWR 265 >UniRef50_B6JJW7 Transcriptional regulator, LysR family n=25 Tax=Bacteria RepID=B6JJW7_OLICO Length = 438 Score = 206 bits (525), Expect = 1e-51, Method: Composition-based stats. Identities = 41/317 (12%), Positives = 96/317 (30%), Gaps = 26/317 (8%) Query: 6 TTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPT 65 + + L L+ + + + AA + V+ S++S+ + L F PLF G+ T Sbjct: 139 SRITLTALIQTLAVAEYLNFRHAANALGVSQSSISERIKALEDTFGIPLFERHARGVKLT 198 Query: 66 PLMVSMEQNLAEWMQMSNLLLDKPH-HQTPRGLKFELAAESPLMMIMLNALSKQIYQRYP 124 + +A + + + + + + + L + Q + +YP Sbjct: 199 DAGRCFVERVAISVAQLDHAVKTIGMMARGDRGRLRIGVHALIPGSFLTEVIGQYHAQYP 258 Query: 125 QATIKLRNWD-YDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVW 183 +++ + + + G +D+ F + ++++ V Sbjct: 259 DVDVEIAEGTASEVVSQLRAGRLDVAFVAGTPEYP----------DLHSTCIWTEPLVVA 308 Query: 184 LRKDHPALHQ-TWNLDTFLRYPHISICWEQS--DTWALDNVLQELGRERTIAMSLPEFEQ 240 L +HP + + + + L +I E Sbjct: 309 LPANHPLVDRNGITWADLAGEAFLVRYGGTGPQVHDHILLRLAGRWLSPSILRLAVERGS 368 Query: 241 SLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 L M AQ + +A + + F + VPF+ +W N Sbjct: 369 LLSMIAQGYGVTIA----------GSAHTLIRPPGVVFLPFLDEPEPVPFSGVWSPHN-R 417 Query: 301 NPKIVWLRETIKNLYAS 317 + + L + + Sbjct: 418 SAVLRNLLDLANQMSRG 434 >UniRef50_Q88I06 Nodulation protein d1 n=4 Tax=Gammaproteobacteria RepID=Q88I06_PSEPK Length = 312 Score = 206 bits (525), Expect = 1e-51, Method: Composition-based stats. Identities = 69/317 (21%), Positives = 139/317 (43%), Gaps = 21/317 (6%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 LDLNLL+ L +L++E+++T+AA+R+++T SA S L +LR +F+D L V + Sbjct: 1 MRFHHLDLNLLVALDILLEEQNITRAAERLHMTQSATSGVLGRLRTFFEDELLVQVGRKM 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDK--PHHQTPRGLKFELAAESPLMMIMLNALSKQIY 120 PTP + + + + E + + F L A L+ ++ + ++I+ Sbjct: 61 QPTPYALELAKPVREVLLTIRASITAKPVFDPAASKRHFRLVASDYLISVVFAQVIQKIH 120 Query: 121 QRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 Q PQ T ++ S + + RGEVD+ L ++LF + Sbjct: 121 QEAPQITFEMIGPGDSSAELLMRGEVDMMIVPE----------RYLIEGHPAQLLFEEDH 170 Query: 181 CVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVL-QELGRERTIAMSLPEFE 239 + +D+P + + L+ +++ HIS+ + ++ ++++ + G R + + +F Sbjct: 171 VCVVWRDNPEVGEHLTLEQYMQMGHISVGFGRNRHLSIEDWFMNQYGFNRRLEVITNDFN 230 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 + + R + Y L L+ P+ ++ +LWH+ Sbjct: 231 TLPQLLVGTVRVA-TMHRRLAELYAGYLPLRLLPPPVKIPVMRE-------FMLWHRSMD 282 Query: 300 HNPKIVWLRETIKNLYA 316 +P WLRE I ++ Sbjct: 283 GDPMHRWLRERISDVIQ 299 >UniRef50_C8X6Z0 Transcriptional regulator, LysR family n=1 Tax=Nakamurella multipartita DSM 44233 RepID=C8X6Z0_NAKMY Length = 289 Score = 206 bits (525), Expect = 1e-51, Method: Composition-based stats. Identities = 50/307 (16%), Positives = 97/307 (31%), Gaps = 25/307 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L+ L ++ E S + AA+ + ++ S VS + KL L SP ++ TP Sbjct: 1 MELHQLRYFLAVVDEGSFSAAAQAVRISQSGVSTQIQKLERELGVSLIDRSPRRVTLTPA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 ++ + + + H + + L L ++ R+P Sbjct: 61 GRALLPAIRSVLTAVAQVSATAHDLRGLVVGSLRIGTVTGLAWPRLVDALAALHTRHPGV 120 Query: 127 TIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 ++L + D + + G +DI +G P + ++ D + Sbjct: 121 DLRLHEGNSDDLVAGVRDGRLDIAVAG---------WAGEPPPGLPSRIVIDDALVAIVA 171 Query: 186 KDHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 H + I++ ALD VL G + + Sbjct: 172 PGHRWADRAAVDPGELGVVDLIALPAGTGARTALDAVLARAGAAADPRWEVSAPATVRML 231 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 AA+ + + +A +VALP+ F LLW R Sbjct: 232 AARDLGVGVLSATTCA------GWDDVVALPID-----DPLARSRFGLLWSAR--PGRAA 278 Query: 305 VWLRETI 311 L + + Sbjct: 279 RALLQQL 285 >UniRef50_A4FC54 Positive Regulator of yybF (LysR family) n=2 Tax=Actinomycetales RepID=A4FC54_SACEN Length = 284 Score = 206 bits (525), Expect = 1e-51, Method: Composition-based stats. Identities = 41/298 (13%), Positives = 87/298 (29%), Gaps = 23/298 (7%) Query: 20 MQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSMEQNLAEWM 79 + VT+ A+R++VT +S+++ +L F LF L + + A + Sbjct: 2 AETEQVTRTAERLHVTQPTLSRAVNRLEKHFGTRLFDRVGKRLRLNRYGEVVRAHAARVL 61 Query: 80 QMSNLLLDKPHH-QTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQATIKLRNWDYD-S 137 + + P+ L + ++ L ++ Q+ P A L D Sbjct: 62 GEIDAAEQRVGAMLDPQRGVVSLGFVTSYGAWLVPQLVQEYRQQAPSAQFMLEGGPADAV 121 Query: 138 LDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPAL-HQTWN 196 LD + VD F E I + + + + + ++HP + Sbjct: 122 LDMLRHESVDAAFCSPEPR----------DEDIHWHPIAEEPLRLVVNENHPLATAKRIE 171 Query: 197 LDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQPDNLLLATA 256 L +++ E D + + G +A+ E + +A Sbjct: 172 LADASGETFVALRPEFGLRQITDVLCNKAGFTPAVALEATEIPTLWGLV--GAGAGVAVL 229 Query: 257 PRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWLRETIKNL 314 P + L + +P + E + + Sbjct: 230 PAATRGPLTRGTKQL--------SIKDAGAVRTAGFATLATRKVSPPVARFVEFVHSH 279 >UniRef50_Q1J2L5 Transcriptional regulator, LysR family n=2 Tax=Deinococci RepID=Q1J2L5_DEIGD Length = 299 Score = 206 bits (525), Expect = 1e-51, Method: Composition-based stats. Identities = 48/307 (15%), Positives = 85/307 (27%), Gaps = 20/307 (6%) Query: 12 LLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSM 71 LL + + S++ AA+ + +T AVS L L +PLF G+ T + Sbjct: 6 HLLTFARVARLGSLSAAAEELYLTQPAVSHQLKLLTHAVGEPLFRRHRTGVHLTAAGEGL 65 Query: 72 EQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQIYQRYPQATIKL 130 + + +AA S + +L + + +YP+ T ++ Sbjct: 66 LPHAQALARALEGAQHYVQELRGLERGVLSVAASSTIAAALLPRVLTAFHSQYPEVTFQV 125 Query: 131 RNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHP 189 R + LDA+ G+V++ L + D + + HP Sbjct: 126 RQGNTREVLDALQSGQVELALIEGPP--------GPLGPHLQARAFGEDELILVIAPTHP 177 Query: 190 ALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQPD 249 L P + + L G + + LP E Sbjct: 178 LAQA--GLQGVATLPLVWREHGSGTREVAEQALAGAGLQTRTVLELPGTEAVKEAVMG-- 233 Query: 250 NLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWLRE 309 L A P + L L E L P + + Sbjct: 234 GLGAAFLPERRVHREVQAGL------LTRLELTLPGLRRPLIQVTPPPEQLSQAARTFLN 287 Query: 310 TIKNLYA 316 + Sbjct: 288 LLHRQTR 294 >UniRef50_P03030 Transcriptional activator protein lysR n=101 Tax=Proteobacteria RepID=LYSR_ECOLI Length = 311 Score = 206 bits (525), Expect = 1e-51, Method: Composition-based stats. Identities = 43/312 (13%), Positives = 93/312 (29%), Gaps = 23/312 (7%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 + ++L + +M S+T+AA ++ + VS+ LA+ LF L P Sbjct: 1 MAAVNLRHIEIFHAVMTAGSLTEAAHLLHTSQPTVSRELARFEKVIGLKLFERVRGRLHP 60 Query: 65 TPLMVSMEQNLAEWMQMSNLLLDKPHHQTP-RGLKFELAAESPLMMIMLNALSKQIYQRY 123 T + + + + + ++ R + +A L L + RY Sbjct: 61 TVQGLRLFEEVQRSWYGLDRIVSAAESLREFRQGELSIACLPVFSQSFLPQLLQPFLARY 120 Query: 124 PQATIKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCV 182 P ++ + + L + ++ D+G + P + L S Sbjct: 121 PDVSLNIVPQESPLLEEWLSAQRHDLGLT----------ETLHTPAGTERTELLSLDEVC 170 Query: 183 WLRKDHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQS 241 L HP + D F +IS+ S LD + E +R + + Sbjct: 171 VLPPGHPLAVKKVLTPDDFQGENYISLSRTDSYRQLLDQLFTEHQVKRRMIVETHSAASV 230 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 M + ++ L + + +L+ + Sbjct: 231 CAMVRA--GVGISVVNPLTALDYAASGLVVRRFSIAVP--------FTVSLIRPLHRPSS 280 Query: 302 PKIVWLRETIKN 313 + ++ Sbjct: 281 ALVQAFSGHLQA 292 >UniRef50_Q46U73 Regulatory protein, LysR:LysR, substrate-binding n=8 Tax=Burkholderiales RepID=Q46U73_RALEJ Length = 313 Score = 205 bits (524), Expect = 1e-51, Method: Composition-based stats. Identities = 45/322 (13%), Positives = 95/322 (29%), Gaps = 26/322 (8%) Query: 1 MKKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPL 60 MK +++ + + +L + + +AA +++++ SA+S + ++ LF + Sbjct: 1 MKINLS---MRDIETTLVLARTLNFRQAASQLHLSQSALSTQILRIEESLGVRLFDRTTR 57 Query: 61 GLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQI 119 + T Q A +D + +AA L ML + Sbjct: 58 TVRLTAAGAVFMQQAALLQAAFRGAIDAVTGIASAERGQVAVAALPSLAARMLPRVLMAY 117 Query: 120 YQRYPQATIKLRN-WDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSD 178 ++ P+ +K+ + + D + GEVD + + + YE L SD Sbjct: 118 HRARPEVALKVFDTLSGPAFDMVRAGEVDFALTAADPQQA----------DLHYEPLLSD 167 Query: 179 VPCVWLRKDHPALH--QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLP 236 + + H PH+S+ S + + Sbjct: 168 RFVLLIPAAHAMARGSGPLRWADTASAPHVSMTNPSSVRQYTEWAFLQNRIRFQPVFEAE 227 Query: 237 EFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHK 296 M +A P + + E L+ + Sbjct: 228 HLATIAAMVEC--GFGVAALPEIAA-------GTVRQPGIVERLLTAPVTERSIGLVTPR 278 Query: 297 RNSHNPKIVWLRETIKNLYASM 318 S +P L + ++ A Sbjct: 279 NRSLSPAAAELADAVRVHLAQF 300 >UniRef50_B9KWM6 LysR family transcriptional regulatory protein n=2 Tax=Rhodobacteraceae RepID=B9KWM6_RHOSK Length = 300 Score = 205 bits (524), Expect = 1e-51, Method: Composition-based stats. Identities = 47/313 (15%), Positives = 96/313 (30%), Gaps = 26/313 (8%) Query: 11 NLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVS 70 + +E + +AA+R+N++ A+ + + L A PL P G+S T + Sbjct: 5 RHFRYFLAVAEELNFHRAAERLNLSQPALWRQIRDLEAEMGTPLLEREPRGISLTRAGAA 64 Query: 71 MEQNLAEWMQMSNLLLDKPHHQ-TPRGLKFELAAESPLMMIM-LNALSKQIYQRYPQATI 128 ++ + ++ + + + + + +P+ ++ Sbjct: 65 FLEDCRDILERVENARLRARRIVQGELGTLHIGFNEIAGRRPEMPRFLQAFRRAFPEVSL 124 Query: 129 KLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKD 187 +L +DA+ G +D GF R RS + D + L +D Sbjct: 125 QLHFLMSQLQVDALRGGSLDAGFLLRPRGERS---------DFQTLRIGEDDYALALPRD 175 Query: 188 HPALHQT-WNLDTFLRYPHISICWEQS--DTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 HP + L I + L L++ G IA + + Sbjct: 176 HPLTRREGIRLTDLSDQALILPNPRNNAVIYDRLMTRLRDAGVSARIAQFADNENTIMNL 235 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 L + + L L + V L+W + NP + Sbjct: 236 VDAGMGLAFLNLSF---RPPEASGVVLRPL-------ADLTMPVDLELVWR-GANANPAL 284 Query: 305 VWLRETIKNLYAS 317 L E ++ + Sbjct: 285 AHLVELVRTQAEA 297 >UniRef50_C9XVD4 Nitrogen assimilation regulatory protein nac n=1 Tax=Cronobacter turicensis RepID=C9XVD4_CROTZ Length = 348 Score = 205 bits (524), Expect = 1e-51, Method: Composition-based stats. Identities = 40/316 (12%), Positives = 99/316 (31%), Gaps = 23/316 (7%) Query: 7 TLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTP 66 ++L L ++ S+T+AA+ +++ A+S+ +A L D L + + G++PT Sbjct: 43 KMNLRRLKYFVKIVDIGSLTQAAEVLHIAQPALSQQVATLEGEMDQQLLIRTKRGVTPTE 102 Query: 67 LMVSMEQNLAEWMQMSNLLLDKPHHQ-TPRGLKFELA-AESPLMMIMLNALSKQIYQRYP 124 + + ++ ++ + + A + L + + P Sbjct: 103 AGKILYAHARTILRQCEQAQLAVNNVGQTLQGQVSVGLAPGTAASSVTMPLLQAVRAELP 162 Query: 125 QATIKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVW 183 + L +L D + G++D+ + + + L + + Sbjct: 163 DVLVYLHEDSGAALNDKLLSGQLDMAVLYDRAPVA----------GLTSQPLIKEDLFLV 212 Query: 184 LRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 +D P Q+ +L + + + +D I + Sbjct: 213 GTRDCP--GQSVDLTSVAQMNLFLPRDYSAVRKRVDEAFSLRRLTAKIIGEIESVSTLSA 270 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 A + + P +A + +P +L R P+ Sbjct: 271 AIAS--GMGVTVLPESAARSLASSTNGWLAR------ITSPSMTLPLSLNVSSRAPLTPQ 322 Query: 304 IVWLRETIKNLYASMA 319 +++ + +L A A Sbjct: 323 AQAVKDILLSLVARPA 338 >UniRef50_A5G2J6 Transcriptional regulator, LysR family n=1 Tax=Acidiphilium cryptum JF-5 RepID=A5G2J6_ACICJ Length = 299 Score = 205 bits (524), Expect = 1e-51, Method: Composition-based stats. Identities = 41/307 (13%), Positives = 92/307 (29%), Gaps = 27/307 (8%) Query: 9 DLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLM 68 D+ L L + +AA+R+N+T +S+ + L L + T Sbjct: 3 DIRQLRYFIALAETLHFGRAAERLNLTQPPLSRQIMALEKDLGVRLVDRHSRHVRLTQAG 62 Query: 69 VSMEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNALSKQIYQRYPQAT 127 + E + + + + L ++ L++++ P Sbjct: 63 LRFVAEAREIVTLFDRACRNARRAASGEIGELSLGFMMHAAQTIVPKLARRVMTDLPGVE 122 Query: 128 IKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRK 186 ++LR + + + G++D+G R ++ ++ + CV L+ Sbjct: 123 LRLREVMPNILVSDLMAGQLDLGVMFPPPPVR----------GLEVRPVYRERLCVVLQA 172 Query: 187 DHPALHQT-WNLDTFLRYPHISICWEQ--SDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 H ++ D + P I E + ++ G TI + + Sbjct: 173 GHELAARSLICRDDLVNLPLILTPAETAPALRNVIEEYCHAGGFRPTIRVETQLQTTIVS 232 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 +AA+ P + L ++ + L W + NP Sbjct: 233 LAAEGIGAG--LVPVSVSRLAPS-GVQFCEL--------EEAPTIDHVLAWCA-ANMNPS 280 Query: 304 IVWLRET 310 + Sbjct: 281 LKLFLAM 287 >UniRef50_A9H8E1 Putative transcriptional Regulator, LysR family n=1 Tax=Gluconacetobacter diazotrophicus PAl 5 RepID=A9H8E1_GLUDA Length = 310 Score = 205 bits (524), Expect = 1e-51, Method: Composition-based stats. Identities = 43/307 (14%), Positives = 92/307 (29%), Gaps = 28/307 (9%) Query: 12 LLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVN-SPLGLSPTPLMVS 70 L L L + R +AA +VT S +S + L D L + TP+ Sbjct: 9 QLRYLITLAELRHFGRAALACSVTQSTLSAGILALERQLDVQLLDRNVGKRVVFTPIGDE 68 Query: 71 MEQNLAEWMQMSNLLLDKPHH-QTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQATIK 129 + ++ + D + P + + ++ L ++ +++PQ + Sbjct: 69 VAARARFALETLQAVQDVADASRAPMTGLLRIGVIPTIGPFIMPGLVSRLRRQFPQIRLS 128 Query: 130 L-RNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDH 188 + + + +D + G +D+ + L+ D + L DH Sbjct: 129 VNEDLTGNVMDKLALGRLDLVLLAMPCPCEGT----------ETLPLWRDEFMLLLPADH 178 Query: 189 PALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELG--RER--TIAMSLPEFEQSLF 243 + ++ + + ++ ++ + + Sbjct: 179 ALAALDSIPVERIAGERMVLLEDGHCLREQTLSLCRQERGWSTPDGDEEFVVTSLYTLVD 238 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 M A+ L +A PR L LPL + L W R +P+ Sbjct: 239 MVAE--GLGIALLPRLAVESGI-----LRDLPLVVRPVTGCQAWRTIGLAWRPR---SPR 288 Query: 304 IVWLRET 310 R+ Sbjct: 289 AADFRQL 295 >UniRef50_C0GDQ1 Transcriptional regulator, LysR family n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GDQ1_9FIRM Length = 301 Score = 205 bits (524), Expect = 1e-51, Method: Composition-based stats. Identities = 46/313 (14%), Positives = 95/313 (30%), Gaps = 26/313 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++ L + ERS ++AA+++ ++ VS + L LF L T Sbjct: 1 MEFYQLEAFVSVAAERSFSRAAEQLYLSQPTVSAHIKSLEKELGTSLFDRGKTELKLTGA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTP-RGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + E + + +D + +AA S +L + + + Sbjct: 61 GSVLYRFAREMLALRLSAVDSIRDSSEIGEEALTVAASSVPCQYLLPRAIAAFKELHNRV 120 Query: 127 TIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 IKL + ++ + + V +G G +++ L D V + Sbjct: 121 NIKLTQKNSKETCEDVFNYHVPVGVVGE----------KIKRPHLEFAPLLEDELVVAVP 170 Query: 186 -KDH---PALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSL--PEFE 239 K H ++ +L+ + + ++ L + + E Sbjct: 171 HKQHYSELLAKESVSLNDLSGHKMLLREPGSGTRSHFESELVKANASTEMFQVTIFDNQE 230 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 Q L L RY + L L+ F L+ H + Sbjct: 231 TIKQAVRQ--GLGLTVISRYVVSDYLQFGI------LATRSITDLNLKRSFYLVSHSKRI 282 Query: 300 HNPKIVWLRETIK 312 +P L + +K Sbjct: 283 LSPASKALLDHLK 295 >UniRef50_A8GI04 Transcriptional regulator, LysR family n=2 Tax=Serratia RepID=A8GI04_SERP5 Length = 307 Score = 205 bits (524), Expect = 1e-51, Method: Composition-based stats. Identities = 44/313 (14%), Positives = 95/313 (30%), Gaps = 27/313 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 + L + + + S++ AA+ + V+ S+++ ++ +L LF G++ T Sbjct: 2 MTLRQIRHFIAVAETGSISAAAQAVFVSQSSLTLAIQQLETDIGVRLFDRHAKGMNLTHQ 61 Query: 68 MVSMEQNLAEWMQMSNLLLDKPH-HQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + + K + S + L L K+ YP Sbjct: 62 GHQFLRQSYLILATVDNAKRSLQLGTESLTGKLTIGVTSLVAGYFLVELLKRFKSAYPNV 121 Query: 127 TIKLRNWDYDSLDAIT-RGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPC---- 181 TI++ + ++ + GE+DIG A+ EVL Sbjct: 122 TIQMIEDERPYIEHLLVSGEIDIGVLIL--------SNIEDRDALQTEVLMHSPYRLWLP 173 Query: 182 -VWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQ 240 + DH ++ L + P I + + + G + IAM E Sbjct: 174 PLHPLLDH----ESIGLADVAKLPLIQLNAD-EMDVHARRIWARAGVKPEIAMKTGSTEA 228 Query: 241 SLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 + A + ++ P L + + + L W + ++ Sbjct: 229 VRSLVAA--GMGVSILPDMAYRAWSLEGNMI-----EARKLVDLLEPLDIGLAWRRGSAR 281 Query: 301 NPKIVWLRETIKN 313 + + Sbjct: 282 PELVTPFLTIARE 294 >UniRef50_Q46S80 Transcriptional regulator, LysR family n=4 Tax=Cupriavidus RepID=Q46S80_RALEJ Length = 310 Score = 205 bits (524), Expect = 2e-51, Method: Composition-based stats. Identities = 51/309 (16%), Positives = 97/309 (31%), Gaps = 23/309 (7%) Query: 7 TLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTP 66 + L L + + +S T+AA + +T SAVS+S+ +L D LF + + T Sbjct: 2 NISLPQLKAFAAVARHKSFTRAAAELGLTQSAVSRSVRELEEEIDQRLFDRTTRQVELTD 61 Query: 67 LMVSMEQNLAEWMQMSNLLLDKPH-HQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQ 125 + Q + ++ L + P ++A + L + + A + +P Sbjct: 62 AGQHLSQRICHLIEEVEQTLRESQGAARPSQGMVQIATDPVLSSMSVPAWLAGCRKAWPA 121 Query: 126 ATIKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 I L++ + L ++ GEVD G + + E L D L Sbjct: 122 IAIHLKDRSQESVLQSVRSGEVDFGIATDP----------QSSDDLYCEPLCVDPYHAVL 171 Query: 185 RKDHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 HP ++ + ++ L L F Sbjct: 172 PAQHPLASRDAIAWGDLSNANVFTLDQQCGVQPVVEKALSHHHVRAGSLQLLGHFAAVFG 231 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 M A L + P Q + L + ++ L+ K S P Sbjct: 232 MVA--LGLGIGVVPSRAQAGGLHPAAVMRPL--------RPQVTSTVMLVRRKSRSLKPN 281 Query: 304 IVWLRETIK 312 + + ++ Sbjct: 282 AAAIWDALR 290 >UniRef50_UPI0001B4C1F4 LysR family transcriptional regulator n=1 Tax=Streptomyces hygroscopicus ATCC 53653 RepID=UPI0001B4C1F4 Length = 297 Score = 205 bits (524), Expect = 2e-51, Method: Composition-based stats. Identities = 47/313 (15%), Positives = 89/313 (28%), Gaps = 25/313 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L + + S T+AA+ ++ S+V+ + L LF ++ T Sbjct: 1 MELKHLTTFLAVARHMSFTRAAQDLDYVQSSVTAHIKALEQDLGAALFERLGRRITLTHA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPH----HQTPRGLKFELAAESPLMMIMLNALSKQIYQRY 123 + + + + +AA L +L + + + + Sbjct: 61 GRELLPHARQLAHQAEQARQAVEGASGDPRTIRGTLRIAAPESLCAHLLPPVLRALMDHF 120 Query: 124 PQATIKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCV 182 P + + L ++ G +D GF E E+L + + Sbjct: 121 PHLRVVFGPAGRNTLLTSLNEGTLDAGFLLEEKITAPMA---------TTELLAQEPLRL 171 Query: 183 WLRKDHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQS 241 HP LH+ + + I + +D L T M E Sbjct: 172 IAHPGHPLLHRRHVDTADLADETLLLIEPGCAQRDVMDRELGRAAIHPT-TMEFVSVEAL 230 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 AA L +A P + LP L HK + Sbjct: 231 KRCAAA--GLGVALLPAAAVTDELARG-EVAPLPWTSKPVLG------IHYLRHKDRLPS 281 Query: 302 PKIVWLRETIKNL 314 I L + ++ Sbjct: 282 TVITTLADLARHH 294 >UniRef50_C5CZY6 Transcriptional regulator, LysR family n=1 Tax=Variovorax paradoxus S110 RepID=C5CZY6_VARPS Length = 325 Score = 205 bits (524), Expect = 2e-51, Method: Composition-based stats. Identities = 72/325 (22%), Positives = 133/325 (40%), Gaps = 24/325 (7%) Query: 1 MKKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPL 60 M +S +D++LL L L+ ERSV++AA R+N T A+S +L +LR F DP+ V Sbjct: 1 MTRSQDLVDIHLLRVLAALVAERSVSRAAVRMNQTQPAISAALRRLRDAFGDPILVRERG 60 Query: 61 GLSPTPLMVSMEQNLAEWMQMSNLLLD--KPHHQTPRGLKFELAAESPLMMIMLNALSKQ 118 G+ PT + + ++ E + + +L + + F +A L + + + Sbjct: 61 GMVPTARALQLRESAREVLGEIDRMLAGPERFEPGASTMTFTIATPDYLAASFMAEVVAR 120 Query: 119 IYQRYPQATIKLRNWDY--DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLF 176 PQA + + D A+ +GE+DI P + +L Sbjct: 121 FRAEAPQARLLIHPLTPGYDYERALAQGELDIVIGNWPLP----------PERMHLSLLI 170 Query: 177 SDVPCVWLRKDHPALH-QTWNLDTFLRYPHISICW-EQSDTWALDNVLQELGRERTIAMS 234 D + +P L +L H+ +S +D+ L L + R + Sbjct: 171 EDELVCMMSPGNPLAAPGAMTLQRYLAAAHVVPTPFAKSHRAVVDSHLAGLRQTRDARVF 230 Query: 235 LPEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLW 294 +P + + ++ A+ D + TA + + + + + VA P + + F LW Sbjct: 231 VPYYAMAPYLVAESDLV-FTTARHFAEQFTRSLPVVSVAAP-------EGFPRMRFYQLW 282 Query: 295 HKRNSHNPKIVWLRETIKNLYASMA 319 H+R+ H WLR + + +A Sbjct: 283 HERSQHQGAHRWLRSLLSTVGGHLA 307 >UniRef50_UPI0001745C10 putative transcriptional regulator,lysR family protein n=1 Tax=Verrucomicrobium spinosum DSM 4136 RepID=UPI0001745C10 Length = 303 Score = 205 bits (523), Expect = 2e-51, Method: Composition-based stats. Identities = 48/314 (15%), Positives = 101/314 (32%), Gaps = 28/314 (8%) Query: 9 DLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLM 68 L L C + +E S T+AA+R+++ +S+ + L PLF S G++ T Sbjct: 4 SLRELECFVAVAEELSFTRAARRLHLAQPPLSRHIRVLEEKIGAPLFERSQKGVALTAAG 63 Query: 69 VSMEQNLAEWM-QMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQAT 127 ++ + Q+ + L S ++ L ++ QR+PQ Sbjct: 64 AVFQEETRGILPQLLRAGEAVRRQLQGETARLRLGFVSAVLSEKLVETFRRFRQRHPQVQ 123 Query: 128 IKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRK 186 + L + + + +G +D GF G + R PL + + + ++ Sbjct: 124 VMLHDMPPAEQWLGMIQGTLDGGFVGLMPDEKDR------PLGMQHVPWREEPLVAFVPS 177 Query: 187 DHPA-------LHQTWNLDTFLRYPHISICWEQS--DTWALDNVLQELGRERTIAMSLPE 237 H + ++ F R P +++ E + L + G I + P Sbjct: 178 GHRLGAGGSNSSRKPVSIKEFAREPFVAVSSEAAPVFATLLRELCSAAGFRPRIVLESPR 237 Query: 238 FEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKR 297 + +A P + + ++ + Sbjct: 238 AQAVAV--MVAAGSGVAFLPESLAHVLGGSVEVVR---------LKEAPVITHVFAHPAG 286 Query: 298 NSHNPKIVWLRETI 311 S +P + E + Sbjct: 287 GSTSPAMKAFLELL 300 >UniRef50_A8HSB3 Regulatory protein n=1 Tax=Azorhizobium caulinodans ORS 571 RepID=A8HSB3_AZOC5 Length = 298 Score = 205 bits (523), Expect = 2e-51, Method: Composition-based stats. Identities = 39/307 (12%), Positives = 79/307 (25%), Gaps = 20/307 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 L L + L + +AA+ VT A+S + + A L + TP+ Sbjct: 2 LSTRQLRYFEALSRHLHFGRAAEECAVTQPALSMQIRDMEADLGVDLVERGRGSVRLTPM 61 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTP-RGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 E + L Q + L + +L L + Q YP+ Sbjct: 62 GEETAVRAREILASLTDLERSIRAQGSLLEGRLRLGVIPSVAPYLLPRLLPAVGQAYPRV 121 Query: 127 TIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + LR + + G +D+ A++ LF D + L Sbjct: 122 ELALRETQTEQLVAELLNGSLDLLILSLPVE----------HPALETRALFDDAFLLALP 171 Query: 186 KDHPALHQTW-NLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 + D + + V + + R + + Sbjct: 172 EGAELPEGDLATPDHLAPDDLLLLEDGHCFRDQALQVCGAMDQRRLRRFGATSLSTLVQL 231 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 A + + P + + P + ++W + + I Sbjct: 232 VA--NGQGVTLLPEMLVACEGGQIPRVRLVRFP-----EPAPRRSIGMVWRRSSPFVRDI 284 Query: 305 VWLRETI 311 + Sbjct: 285 AAFARLV 291 >UniRef50_B5JUQ0 Transcriptional regulator, LysR family, putative n=1 Tax=gamma proteobacterium HTCC5015 RepID=B5JUQ0_9GAMM Length = 300 Score = 205 bits (523), Expect = 2e-51, Method: Composition-based stats. Identities = 58/317 (18%), Positives = 119/317 (37%), Gaps = 21/317 (6%) Query: 1 MKKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPL 60 MK ++ ++DLNL + +M++ S+ AA + ++ A S +L +LR D LFV + Sbjct: 1 MKLNLRSVDLNLFPVFEAIMEQGSLNMAACHLGMSQPAASAALKRLRLTIKDELFVRTRR 60 Query: 61 GLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPR--GLKFELAAESPLMMIMLNALSKQ 118 GL PT + + + ++ +++ + P F++A M+ + L Sbjct: 61 GLEPTARALELYPVVHHLLESLRGEMERANQFDPLFCERIFKVAGGDYFDMVFMGRLMNM 120 Query: 119 IYQRYPQATIK-LRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFS 177 + + P+ ++ + + +SL+ I RG++D+ + + LF Sbjct: 121 LRESAPKVQVESVIHGFQESLNLIQRGKLDLCLHYD----------KEIAHELPTLKLFE 170 Query: 178 DVPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPE 237 + V + DHP + +L ++ H+ + + LD +L R + + Sbjct: 171 ESMSVLMAADHPYADKQLSLSDYIALEHVVLPKLSGNANQLDVILGGFNENRCVRARVSS 230 Query: 238 FEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKR 297 + Q + R + + L P P L W Sbjct: 231 VSSMVMAIKQSYLIG-TIPTRMASILCEGYDLVFKPFPKEAPPI-------PIYLSWAPF 282 Query: 298 NSHNPKIVWLRETIKNL 314 + + W R I +L Sbjct: 283 SDKDSVHRWFRNMIASL 299 >UniRef50_Q2W289 Transcriptional regulator n=2 Tax=Magnetospirillum RepID=Q2W289_MAGSA Length = 324 Score = 205 bits (523), Expect = 2e-51, Method: Composition-based stats. Identities = 48/315 (15%), Positives = 106/315 (33%), Gaps = 22/315 (6%) Query: 6 TTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPT 65 T+D+ L +++ S+TKAA+ ++V A+S L +L F PL + G+ PT Sbjct: 19 RTMDIRQLRYFLGIVEHGSLTKAAEALHVAQPALSLHLKRLEEEFGCPLVHRTARGVVPT 78 Query: 66 PLMVSMEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQIYQRYP 124 + + ++ L D+ + + L ++ L+ + + +P Sbjct: 79 ESGLRLAVRAGVLVERMANLKDEIRGLEAAPAGPAVIGIPTSLGPMLTVPLALAVRRLHP 138 Query: 125 QATIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVW 183 +++ L+ + G VD+ H P + + + + Sbjct: 139 SIHLRVVEGLSGHMLEWVLSGSVDMALVFGSEH----------PAGLATRFIARERLALV 188 Query: 184 LRKDHPAL--HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQS 241 KD P L + +L L P I ++ + LG E ++ + + +Q Sbjct: 189 GPKDDPLLNGRRDMDLAHVLALPLILPGRPHGVRAEVERAGRALGTEPSVVIEIDALDQI 248 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 + A + + RY ++ + L + ++E +L + Sbjct: 249 KALVAAGAGYTV-LSERYARFGAEAANLDALP-------IVGPEIERTISLAHALGRPLS 300 Query: 302 PKIVWLRETIKNLYA 316 + Sbjct: 301 LAARAVHAIAVEHLD 315 >UniRef50_Q478C5 Transcriptional regulator, LysR family n=2 Tax=Betaproteobacteria RepID=Q478C5_DECAR Length = 327 Score = 205 bits (523), Expect = 2e-51, Method: Composition-based stats. Identities = 45/294 (15%), Positives = 88/294 (29%), Gaps = 24/294 (8%) Query: 7 TLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTP 66 DL L + + S+T+AA+++++ PS+ S L +L A PLF GL+PTP Sbjct: 29 RYDLPDLRLVAAIADSGSLTRAAEQVHLAPSSASHRLTQLEAALGIPLFARHARGLTPTP 88 Query: 67 LMVSMEQNLAEWMQMSNLLLDKPHHQT-PRGLKFELAAESPLMMIMLNALSKQIYQRYPQ 125 S+ ++ + + + + A + + L + +P Sbjct: 89 AGESLLRHARQVFAQLEQMHADLAPYASGLHSQVTVFANTNAINCFLPEDLGDFLREHPH 148 Query: 126 ATIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 + L + A+ G+V+IG E ++ D + + Sbjct: 149 IRVSLEEQPSPAIIQAVAAGQVEIGVVASEGGLA----------GVETRPYRQDRLVLIV 198 Query: 185 RKDHPALHQ-TWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 H + L P + + + + N LG + + + F Sbjct: 199 APGHALAEKCELAFADVLAEPFVCLHAGSAIHTFMMNHAARLGGRLDVRIQVRSFNAVCR 258 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKR 297 M A + + + E L R Sbjct: 259 MVAAGVGIGMVPRSSIGAADA-----------VKTIEITDSWAPRDLQLCIRSR 301 >UniRef50_C1D4D4 Transcriptional regulator, LysR family n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1D4D4_LARHH Length = 304 Score = 205 bits (523), Expect = 2e-51, Method: Composition-based stats. Identities = 44/306 (14%), Positives = 95/306 (31%), Gaps = 23/306 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +DL L +++ S T+AA+++ VT +SK + L +PL V + PT Sbjct: 3 MDLRALRYFVAVVRLASFTRAAEQLFVTQPTISKMIRSLEDSLGEPLLVRDGRQIRPTAA 62 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + ++ ++ ++ L + + L + +++ L R+P Sbjct: 63 GSIVLEHAERMLREASHLHEDLAGLRGLTHGQLCLGIPPMVGPLVVP-LLASFRARHPGI 121 Query: 127 TIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + A++RGEVD+ S ++ + L Sbjct: 122 RPRFTESGGLALEAAVSRGEVDLAISVLPV----------SDDSLAVAPMADYPLWAVLP 171 Query: 186 KDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMA 245 P + L P + + T + ++ G +A ++ + Sbjct: 172 GGSPPVPSPLPLAALHDQPFVLYEDDFVLTGRILAACRQRGFVPAVAGQSRHWDFIGELV 231 Query: 246 AQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIV 305 A +A P ++ V L + L +W + + Sbjct: 232 AAGTG--VALLPSPVASRLDPARVRCVELD-------EPDLRWRLGWVWRE-ALLDHASR 281 Query: 306 WLRETI 311 E + Sbjct: 282 AWLEHV 287 >UniRef50_D1PWM9 HTH_1 family transcriptional regulator n=4 Tax=Prevotella RepID=D1PWM9_9BACT Length = 306 Score = 205 bits (523), Expect = 2e-51, Method: Composition-based stats. Identities = 44/314 (14%), Positives = 105/314 (33%), Gaps = 25/314 (7%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 ++ T++L + L + + ++A+K + +T S +S+ + +L FD LF + G+ Sbjct: 1 MTVVTMELRQIRYFLKLAELLNFSEASKALFITQSTLSQQIRQLEQEFDTVLFDRNSHGV 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTP-RGLKFELAAESPLMMIMLNALSKQIYQ 121 S T + + + + ++ + K + + +L + + Sbjct: 61 SLTEAGMQLRRYARCVVNEADACVQKMEDLKNMLAGELNIGVTFSFSP-LLTETVLEFMK 119 Query: 122 RYPQATIKLRNWD-YDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 RYP + + + +D + + EVD + + + + I+ VLF + Sbjct: 120 RYPNVRLNVYYKTMGELMDMLQQREVDFVLAFKP---------TVMNDKIESHVLFGNRL 170 Query: 181 CVWLRKDHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFE 239 V + HP ++ D + Y D + G + + L + Sbjct: 171 SVVVSDTHPLAKRKSITTDDLMMYDLALPARGLQARNTFDETIGMAG-HPKVRIELNDVS 229 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 L + Q + + + + LVA+P+ + + K + Sbjct: 230 ILLKLVRQSKLITV------LAEASIHDEDGLVAIPIQIANDGMEGCIHQLRQAYVKNS- 282 Query: 300 HNPKIVWLRETIKN 313 + Sbjct: 283 ----AREFYRLLSQ 292 >UniRef50_Q213Z8 Transcriptional regulator, LysR family n=2 Tax=Rhodopseudomonas palustris RepID=Q213Z8_RHOPB Length = 297 Score = 205 bits (523), Expect = 2e-51, Method: Composition-based stats. Identities = 45/312 (14%), Positives = 101/312 (32%), Gaps = 23/312 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +DL+ + L + +E +AA R+N+ +S+S+ +L LF + + TP Sbjct: 3 IDLHHMRHLVAVAEELHFGRAAARLNMAQPPLSQSIKRLELALGFALFSRTQRRVELTPA 62 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMI-MLNALSKQIYQRYPQA 126 +Q ++ + L + + +L + R+P Sbjct: 63 GQVFLAEARRTLQQADETVRLARRAAAENLAELAVTFTSAALYRVLPTALRAHRDRFPSV 122 Query: 127 TIKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 I+L D + + G VD+GF ++ EV+ D + + Sbjct: 123 EIRLDERPTDAQIAGLQDGSVDVGFVTPPL---------KAFSGLELEVISRDRFALAVP 173 Query: 186 KDHPALHQ-TWNLDTFLRYPHISIC--WEQSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 P + L + + L + ++ G + + Sbjct: 174 ISSPFAQRDAVALHELATEAFVLFPYVQGPALHGRLMSACRQAGFLPRVRQEARQMHTIF 233 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 + A + ++ P ++ + +VAL L ++ W + + P Sbjct: 234 SLVAAE--MGVSLVPEGA-RSMRVEGVTMVAL-----SDFPVDLTWDLSIAWKPKGAGRP 285 Query: 303 KIVWLRETIKNL 314 + E +++L Sbjct: 286 -LRAFIEIVRSL 296 >UniRef50_B4ELV6 LysR family regulatory protein n=1 Tax=Burkholderia cenocepacia J2315 RepID=B4ELV6_BURCJ Length = 306 Score = 205 bits (523), Expect = 2e-51, Method: Composition-based stats. Identities = 67/299 (22%), Positives = 121/299 (40%), Gaps = 17/299 (5%) Query: 22 ERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSMEQNLAEWMQM 81 ERSVT+A R+ +T A S++L +LR D + V +P GL TP S+ Q ++ + Sbjct: 23 ERSVTRAGMRLGLTQPAASRALGRLRTLLHDRVVVRTPKGLEFTPRAASLAQRVSRVLTE 82 Query: 82 SNLLLD-KPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQATIKLRNWDYDSLDA 140 + ++ F +A+ + + ++ ++ ++ + P + + ++++ Sbjct: 83 AAGIVAPAVFDPATARGLFSIASLDHMALTLIPDVNARLERSAPGLDLDVPPSRSNNVEL 142 Query: 141 ITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPALHQTWNLDTF 200 +T G I + LP I L+ D +R HPAL F Sbjct: 143 VTDGTAGIALGVFDDDT--------LPAGIYRRKLYDDNLVCIVRNGHPALSARLTPKRF 194 Query: 201 LRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQPDNLLLATAPRYC 260 H+ + +D L G R IAM LP F + + A+ D + L R Sbjct: 195 AALSHVLVTIGGRGGELVDAALARQGLHRRIAMRLPHFLVAPMVVAKSD-MTLVLPQRLA 253 Query: 261 QYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWLRETIKNLYASMA 319 ++ + LV LP+ +++WH+R +P WLR+ I + M Sbjct: 254 RHVALSMPVTLVKLPVEVPSFSP-------SMIWHERTHDDPAHGWLRQQIVEVAREMG 305 >UniRef50_Q5FRB3 Oxidative stress regulatory protein OxyR n=2 Tax=Acetobacteraceae RepID=Q5FRB3_GLUOX Length = 309 Score = 205 bits (523), Expect = 2e-51, Method: Composition-based stats. Identities = 46/316 (14%), Positives = 100/316 (31%), Gaps = 27/316 (8%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 ++ L L + + + R+ ++AA+R V+ + +S+ + KL D LF S ++P Sbjct: 6 LSGLSLRDIEYVVAVDDLRNFSRAAERCGVSQAGLSEQVRKLEQLLDVTLFERSRRHVAP 65 Query: 65 TPLMVSMEQNLAEWMQMSNLLLDKPHHQ-TPRGLKFELAAESPLMMIMLNALSKQIYQRY 123 TP + E + + LL+ Q P L L + L ++ + Y Sbjct: 66 TPDGERLLALGREVLAAARNLLEVARAQTGPMEGPLRLGVIPTLGPYYIPGLLPRLREHY 125 Query: 124 PQATIKLRN-WDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCV 182 P ++LR + A+ E+D+ + + ++ LF + Sbjct: 126 PSLNLRLRENMTDALVHALRNSELDVALMALPAPSDA----------LECAPLFEEAFLA 175 Query: 183 WLRKDHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVL---QELGRERTIAMSLPEF 238 H H+ +L R + + ++ G +R Sbjct: 176 VFPSTHELAHKPKLSLSQLGRPDLLLLEDGHCLRDQALSICPTVPRQGEQRL----ASSL 231 Query: 239 EQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRN 298 E +M + + P+ + + + L W + Sbjct: 232 EMLWYMIGAGEG--FSLIPQIALRNRAD-----FEDLITVRSLPEPEARRTIGLTWRASD 284 Query: 299 SHNPKIVWLRETIKNL 314 P ++++ Sbjct: 285 PRAPVFREFAAYLRSI 300 >UniRef50_A6GLG8 Transcriptional regulator, LysR family protein n=1 Tax=Limnobacter sp. MED105 RepID=A6GLG8_9BURK Length = 292 Score = 205 bits (523), Expect = 2e-51, Method: Composition-based stats. Identities = 40/306 (13%), Positives = 91/306 (29%), Gaps = 24/306 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L+LL ++E S TKAA ++ ++ AVSK++ +L + D L P Sbjct: 1 MNLHLLRIFVCAVEENSFTKAADQLGISQPAVSKAVRELESQLDTLLLERQGKYFKPNEA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + M + + + A + + L K+ ++P Sbjct: 61 GQVLYDYGKSLFAMEREASEVLRAFKNLERGRLIVGASTTVASYWLAPYLKKFSDKHPGV 120 Query: 127 TIKLRNWDYDSLDA-ITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 I++ + +S+ + +VD+ E + I+ + ++ Sbjct: 121 DIQVVGANTESVAQLLLDCKVDVALVEGEVN----------DERIETRLWRTEEMVAIAP 170 Query: 186 KDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMA 245 + + I + +L +G + + + E + Sbjct: 171 S----FESSIRKRELEQQVWILREQGSGSRNVAEQLLLNMGIQAQRTLEMNSNEAIIQAV 226 Query: 246 AQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIV 305 A + + QL L + K+E P L + + Sbjct: 227 AAGCGVGIVP------KITARDQLALRR--VKRFALGSGKMERPLFRLRLPHRPLSNAAL 278 Query: 306 WLRETI 311 + Sbjct: 279 AFEALL 284 >UniRef50_Q13GK2 Transcriptional regulator, LysR family n=1 Tax=Burkholderia xenovorans LB400 RepID=Q13GK2_BURXL Length = 311 Score = 205 bits (523), Expect = 2e-51, Method: Composition-based stats. Identities = 76/322 (23%), Positives = 128/322 (39%), Gaps = 26/322 (8%) Query: 1 MKKSIT--TLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNS 58 M+++ TLD+ LLL L++ERSV++AA + +T SAVS+ L +LR F DPLF+ + Sbjct: 1 MRRNPRVDTLDIKLLLVFDALLRERSVSRAADDVGLTQSAVSQKLGRLRDIFSDPLFIRT 60 Query: 59 PLGLSPTPLMVSMEQNLAEWMQMSNLLL--DKPHHQTPRGLKFELAAESPLMMIMLNALS 116 G+ PTP + + LAE + L+ + F +A + L + Sbjct: 61 ANGMEPTPHALVLSAQLAELLARWKSLVSSQQRFEPATAERNFRVALSDGMSYHCLPPVV 120 Query: 117 KQIYQRYPQATIKLRNWDYDSLDA-ITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVL 175 ++I + P I + + I G D+ + P+ I L Sbjct: 121 RRIREIAPNLRITIVHVGPRGGQREIESGSADLALG----------VFQQPPIGISTCEL 170 Query: 176 FSDVPCVWLRKDHP-ALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMS 234 F K++P T + D +L HI++ ++ +++ LG +R IA+ Sbjct: 171 FRYTLQCVADKNNPRLKQGTMSRDEYLEASHIAVGENNVPGTLVEVIVEALGLKRKIALV 230 Query: 235 LPEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLL- 293 P F + D + Y +QL +P P E + Sbjct: 231 TPHFVSIPNLVLGTDLIG-TFPSSAQDAYPFSNQLCFFPIPFPISE--------SIAMAM 281 Query: 294 WHKRNSHNPKIVWLRETIKNLY 315 WH R +P +WLR + Sbjct: 282 WHPRFDGDPGHMWLRNLFADTL 303 >UniRef50_Q4KHX1 Transcriptional regulator, LysR family n=1 Tax=Pseudomonas fluorescens Pf-5 RepID=Q4KHX1_PSEF5 Length = 308 Score = 205 bits (523), Expect = 2e-51, Method: Composition-based stats. Identities = 79/318 (24%), Positives = 138/318 (43%), Gaps = 21/318 (6%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 + +DLNLL+ L L+ E+ VT+ A R++++ A+S SL+KLR DDP+ + L Sbjct: 6 LRNIDLNLLVVLDALLTEKHVTRTALRLHLSQPAISHSLSKLRGLLDDPILIRRGSELVL 65 Query: 65 TPLMVSMEQNLAEWMQMSNLLLDKP--HHQTPRGLKFELAAESPLMMIMLNALSKQIYQR 122 + L +++Q L E + L K F LA ++L L ++ + Sbjct: 66 SSLAQNIQQPLREILGQIETLFGKSIDFDPASSQRIFTLAMSDYGAALVLPNLMVRLRRD 125 Query: 123 YPQATIKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPC 181 P T+ + + +++G++D+ +L I EVLF + Sbjct: 126 APNTTLVVTQDTRHGMFEQVSQGKIDLALGVFP----------NLSGDISTEVLFEETFS 175 Query: 182 VWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQS 241 L + T +LD++L PHI + + S +D++L++ G +R IA+S+P + + Sbjct: 176 CLLDRRTLPADGTLDLDSYLARPHILVSMDGSANGEVDSLLRDEGLQRRIAVSVPHWRTA 235 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 M D +L + + L PF +WH+R + Sbjct: 236 PSMIHNTDLILTVATRTLDEALLNQDLIQLR--------PPLPIPPFPFVQIWHQRFDNE 287 Query: 302 PKIVWLRETIKNLYASMA 319 P VWLRE +K + A A Sbjct: 288 PAHVWLREQVKQVVAHSA 305 >UniRef50_A0QQC7 Transcriptional regulator, LysR family protein n=1 Tax=Mycobacterium smegmatis str. MC2 155 RepID=A0QQC7_MYCS2 Length = 317 Score = 205 bits (522), Expect = 2e-51, Method: Composition-based stats. Identities = 44/315 (13%), Positives = 89/315 (28%), Gaps = 21/315 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +DL L L ++ SVTKAA+ ++V AVS+ + L LF S G+ T Sbjct: 1 MDLKGLNALLVVADAGSVTKAARILHVEQPAVSRQIKLLETELGVALFERSRRGMVLTDA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPH-HQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + + + + + + ++ L + +RYP Sbjct: 61 GRILVERARRVVDELEKAEAELRAEVSGVRGIVSVGILDSVTDLVAEELVSDVRRRYPNV 120 Query: 127 TIKLRNWDYDSLD-AITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 +++ L + GE+D+ + + + + S+ Sbjct: 121 RLRVFTAFAGQLRSWLYDGELDVALLFGVTDQTA----------LKTLPVASEKLWAVAP 170 Query: 186 KDHPALHQ-TWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 K+ D R+P I + +D G + I++ + Sbjct: 171 KEAALQPDIPVGFDEIARHPLIVPVRGNALRSLVDEAAARAGVDIDISVETNASRVQKNL 230 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 A A P C + L + N + Sbjct: 231 VAA--GHGWAVLPAICLSDEMTSG------KFSLAPLAEAMAMRELVLATPRTNRSTGAV 282 Query: 305 VWLRETIKNLYASMA 319 + + + A Sbjct: 283 RAVAGALLRILHGAA 297 >UniRef50_Q47Q09 Putative LysR-family transcriptional regulator n=1 Tax=Thermobifida fusca YX RepID=Q47Q09_THEFY Length = 308 Score = 205 bits (522), Expect = 2e-51, Method: Composition-based stats. Identities = 42/311 (13%), Positives = 94/311 (30%), Gaps = 19/311 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +D+ L L+ + +V A+ + VTPSAVS+ LA L + PL S T Sbjct: 2 IDVRRLQVLRAFAEHHTVAATAEALGVTPSAVSQQLAALAKETEVPLVERSNRRFVLTGA 61 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + + A + + ++ ++ +P Sbjct: 62 GRVLLERAQVIFAELERAQADLARYAEGSLGSVRVGAFATGISNLVAPAVARLRHTHPGW 121 Query: 127 TIKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + + + S + + GE+DI + H + + + + V L Sbjct: 122 DFSVIQAEPEHSTELLCTGEIDIAVTMSSPHLPATG-----SPGFQFHPVMVEPLDVVLP 176 Query: 186 KDHPALHQ-TWNLD-TFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 +HP + +L I + + G + +F + Sbjct: 177 YEHPLATKMELDLATDLNDADWIMSAPGTVWFDTVAAACHQAGFHPRSTHVVTDFSAAFA 236 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 + A L ++ PR + + + + + + + + P Sbjct: 237 LVAA--GLGVSMVPRLAWHGIAIAHMVVRPV--------RNGPRRHVLAVTRSGANPEPL 286 Query: 304 IVWLRETIKNL 314 + +RE + Sbjct: 287 LTAMREAAHRI 297 >UniRef50_A4AGD2 Putative LysR-family transcriptional regulator n=1 Tax=marine actinobacterium PHSC20C1 RepID=A4AGD2_9ACTN Length = 324 Score = 205 bits (522), Expect = 2e-51, Method: Composition-based stats. Identities = 49/319 (15%), Positives = 102/319 (31%), Gaps = 18/319 (5%) Query: 1 MKKSITT-LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSP 59 M S+ T DL L ++ + +++ AA+ + + A+S+ L + ++ L V S Sbjct: 1 MIMSMDTTPDLLTLRIVRAISDHGTISGAARALGYSQPALSQHLTRTQSRLGLALVVRSG 60 Query: 60 LGLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQ 118 G+ T ++ + + + + +AA + ++ L +Q Sbjct: 61 RGVRLTEAGRALASHAVTVINAVDAASAELAELAGLSSGTVRIAAFPTVSSTVIPRLIRQ 120 Query: 119 IYQRYPQATIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFS 177 + Q++P T+K +L + G D+ + R+ L LF+ Sbjct: 121 LRQQHPNLTVKYVEAEPPQALQLLRDGTADVAITFSYPGDRADPHL-LRDGGHTTVPLFT 179 Query: 178 DVPCVWLRKDHPAL-HQTWNLDTFLRYPHISICWEQSD-TWALDNVLQELGRERTIAMSL 235 + + L HP + +L I + L + G I + Sbjct: 180 EPVVLALPDSHPLASADSVSLADLADDAWI---AGCALCRGHLLALCSVEGFAPAIGLET 236 Query: 236 PEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWH 295 L L +A P+ + + + P Q E + Sbjct: 237 DNALAVLSFV--SRGLGVALLPQLALASLTVPEGVSIHSP-------QPASERTIQYVIQ 287 Query: 296 KRNSHNPKIVWLRETIKNL 314 + P + T+ L Sbjct: 288 PGATRIPSVATTIATLTAL 306 >UniRef50_C4KR89 Transcriptional regulator, LysR family n=67 Tax=Proteobacteria RepID=C4KR89_BURPS Length = 338 Score = 205 bits (522), Expect = 2e-51, Method: Composition-based stats. Identities = 40/296 (13%), Positives = 82/296 (27%), Gaps = 22/296 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 DL L + S+ +AA ++VT A+S+ L +L PLF G+ T + Sbjct: 37 FDLRQLRAFTTIAASGSLGRAADALHVTQPALSRILKRLEEQIGAPLFERHSKGVQLTAI 96 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNALSKQIYQRYPQA 126 ++ + + ++ ++ A + ++L ++ R+P Sbjct: 97 GEALLPHATLLQHEAEHAREEIDALRGLAKGTIKVGAVGSIASLVLPVALGRVLDRWPNL 156 Query: 127 TIKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + + +D +DA+ E+DI S R ++ V Sbjct: 157 RVVIVEGVWDRLVDALLTHEIDIALSTRVPDTDEVVAIAECRWDDVSH--------VVAA 208 Query: 186 KDHPA---LHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRE-RTIAMSLPEFEQS 241 DHP L + + G IA+ Sbjct: 209 PDHPLRAAARAPLTLADTRAARWAIPPRGTAPFEQMRAAFDAHGLAPPDIAVETRSVTAL 268 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKR 297 + A + + + A + + T + Sbjct: 269 KSLVAHAG-----FLSWMAEPMYRAER---RARTIDTLAVEGVAATRTLTAFRRRH 316 >UniRef50_A5V773 Transcriptional regulator, LysR family n=2 Tax=Alphaproteobacteria RepID=A5V773_SPHWW Length = 351 Score = 205 bits (522), Expect = 2e-51, Method: Composition-based stats. Identities = 48/317 (15%), Positives = 104/317 (32%), Gaps = 20/317 (6%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 ++ L + L + + S+ AA + +T A++K+L + A LF + G+ P Sbjct: 1 MSRLTMRHLRIVLAITDGGSLVAAAHTLCMTQPAITKALQETEALLQIELFSRTNRGVVP 60 Query: 65 TPLMVSMEQNLAEWMQMSNLLLDKPHHQ-TPRGLKFELAAESPLMMIMLNALSKQIYQRY 123 TP +++ + ++ H G + + +L + + Sbjct: 61 TPAGLALAAHARLITAQIGHAAEEIHDLRDGMGGRIAVGTLLSASADLLPRAIAMLRRDR 120 Query: 124 PQATIKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCV 182 P+ + + D L + G++D+ + + EVL +DV CV Sbjct: 121 PKLVVTIVEGTNDRLLPDLRLGKLDMVVGRLPEYHEL--------QGLHQEVLLTDVSCV 172 Query: 183 WLRKDHPALHQ-TWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTI-AMSLPEFEQ 240 +R HP + + L + I E + +D ++ G E A+ Sbjct: 173 IVRPGHPLVGRDPLRLADLAGWDWILPRLETTLRRHIDQAFRDEGVEPPPHAVESVSQLT 232 Query: 241 SLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 + + D L + + + L ++ L L P + Sbjct: 233 NRSLVMDADYLGI-LPWQLAHREARAGHLVILPLLLRPTIG-------PVGISTRAECRL 284 Query: 301 NPKIVWLRETIKNLYAS 317 + L +++ Sbjct: 285 SSAAEMLIAAMRDFARQ 301 >UniRef50_C5D1A4 Transcriptional regulator, LysR family n=1 Tax=Variovorax paradoxus S110 RepID=C5D1A4_VARPS Length = 299 Score = 205 bits (522), Expect = 2e-51, Method: Composition-based stats. Identities = 33/313 (10%), Positives = 84/313 (26%), Gaps = 22/313 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +DL L +++ + + +A++R++ T A++ + +L LF + G+ T Sbjct: 1 MDLRDLQYFEVIAELEHMGRASERLHRTQPALTSCVKRLEEACGAALFERTGRGIRLTAA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQ-TPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 ++ + + + +L ++++ P Sbjct: 61 GKALLKWAQRTRFDVESARREIGDIGRGLAGNIRIGIVPTAAQFLLPPAARELMGEAPGI 120 Query: 127 TIKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 T++ D L + GE+D+ + ++L D V Sbjct: 121 TLRTTVALGDILTPLLRSGEIDLMVGTE----------GTQEPGFTSKLLAEDPIVVAAT 170 Query: 186 KDHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGR-ERTIAMSLPEFEQSLF 243 H + L Y + LD + + Sbjct: 171 SSHEIFKKAKPTLKDLAGYRWVLQPPGAPTRDWLDQTFDRSHLPRPQVQVESTMLLMLPS 230 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 + + L + R L + + + + + + + +P Sbjct: 231 LIDETGLL--SFISRLHLQ-EGRSGAALREVKV-----RGVTMRRRMVVTYRESGYLSPA 282 Query: 304 IVWLRETIKNLYA 316 L + Sbjct: 283 AQRLVVLLARHGR 295 >UniRef50_UPI0001B5701E putative LysR family transcriptional regulator n=1 Tax=Streptomyces sp. AA4 RepID=UPI0001B5701E Length = 294 Score = 205 bits (522), Expect = 2e-51, Method: Composition-based stats. Identities = 42/321 (13%), Positives = 82/321 (25%), Gaps = 42/321 (13%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L L + +E + AA ++V +S + L PLF + TP Sbjct: 1 MELRHLRYFVAVAEEGGFSAAAGTLHVVQPTLSMQIRDLEHELGGPLFDRTGRRPRLTPA 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPH-HQTPRGLKFELAAESPLMM-IMLNALSKQIYQRYPQ 125 + + + + D + ++ +L L + ++ P Sbjct: 61 GEAFLGEARQVLAQAERARDTARSALRGETGSVRIGVAGAVVFGGLLAGLIRDFHEARPL 120 Query: 126 ATIKLRNWDYDSLD-AITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 I+LR AI GE+D+GFS + + S V L Sbjct: 121 VRIELREAGPRVQRTAILDGELDVGFSALP--------APADEPRLASVPASSVSFLVAL 172 Query: 185 RKDHPALHQT-WNLDTFLRYPHI--------SICWEQSDTWALDNVLQELGRERTIAMSL 235 H + ++ + G + Sbjct: 173 PAGHRLARRRTLTVEQLAGEELVEYLTGDGDLAPPGSPGR----------GEDPA-RFRA 221 Query: 236 PEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWH 295 L + A L + P + + + F LL H Sbjct: 222 DSTLSVLALVAAKVGLAV--VPAGVDRAA--------VPEVVYRPLAEPGPTTDFHLL-H 270 Query: 296 KRNSHNPKIVWLRETIKNLYA 316 + P + + + Sbjct: 271 RSAESAPAVAAFIQACRASAQ 291 >UniRef50_Q12BL7 Transcriptional regulator, LysR family n=1 Tax=Polaromonas sp. JS666 RepID=Q12BL7_POLSJ Length = 329 Score = 205 bits (522), Expect = 2e-51, Method: Composition-based stats. Identities = 35/312 (11%), Positives = 86/312 (27%), Gaps = 23/312 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +DL L + + S +KAA + ++ A+S+ +A L L + G PT Sbjct: 28 IDLRRLEYFVAVAEAGSFSKAAAALVMSQPALSQQVALLEQEIGQRLLNRTGRGAEPTDA 87 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 +++ + +++ + + + + M L ++ +P A Sbjct: 88 GLALLTHARAIFELAERARADMQERKLIPSGRITIGLPPRVAHAMTADLVERFRAEFPDA 147 Query: 127 TIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 I + + + G +D+ ++ E + + + Sbjct: 148 AISVEEGLSIRLREWLVAGRLDVAVLFDPPASPL----------LNIETIVREPLVLMAS 197 Query: 186 KDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMA 245 P + L + S L++ ++ G + + + L + Sbjct: 198 T--PLPPR-IRLAEVAALSLVLPSKPNSLRQLLESEVKPRGYLLKVVAEVDSIKTVLSLV 254 Query: 246 AQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIV 305 A+ + P P + + K Sbjct: 255 AR--GVAATVLPASAIREWTHDT------PPFMAAIHAPVIRNRLCVAVPKARPATRLSR 306 Query: 306 WLRETIKNLYAS 317 +L + L Sbjct: 307 FLVSLTRELCEQ 318 >UniRef50_Q0FTS9 Transcriptional regulatory protein n=1 Tax=Roseovarius sp. HTCC2601 RepID=Q0FTS9_9RHOB Length = 308 Score = 205 bits (522), Expect = 2e-51, Method: Composition-based stats. Identities = 43/315 (13%), Positives = 103/315 (32%), Gaps = 22/315 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +D L +++ S+T AA+R+N+ A+S+ + L L G+ PT Sbjct: 1 MDFRQLRNFIQVVELNSITAAAERLNIAQPALSRQVKALEEELSVSLLRRHGRGVMPTEE 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPH-HQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + + ++ L H P L + I+ L ++ Q YP+ Sbjct: 61 GIRLARRAKAILEEMEDLAGDISGHSAPLSGTVTLGLPPTVSEILATHLIERTMQDYPEV 120 Query: 127 TIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 +++ + D + RG++D+G + +I + + + + Sbjct: 121 KLRIISGFSGHVQDWLLRGKIDLGVAYE----------GQKSPSIKAQPIIMEQLFLIQS 170 Query: 186 KDHPALHQ--TWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 + + L P I E ++ + E + + + + L Sbjct: 171 ANTEGARDGVPIHARDALEQPLILPNPEHGLRGRVEAIAHEDRIDLNVVLEIDILPTMLA 230 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 + L P ++ L+A P+ ++ ++ L+ + Sbjct: 231 FVER--GLGATILPLVSVIHHVREG-RLIARPI-----VRRTIDRTLVLMTPLNRPGSRL 282 Query: 304 IVWLRETIKNLYASM 318 + + + +M Sbjct: 283 TSSFADFLTSEVHAM 297 >UniRef50_B4BMT1 Transcriptional regulator, LysR family n=2 Tax=Geobacillus RepID=B4BMT1_9BACI Length = 302 Score = 205 bits (522), Expect = 2e-51, Method: Composition-based stats. Identities = 41/309 (13%), Positives = 88/309 (28%), Gaps = 25/309 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +DL + Q +++ RS +AA+ +N S V+ + L L T Sbjct: 1 MDLRTIKTFQTVVKHRSFQRAAEELNYAQSTVTTHIKNLETELGVTLIQR-GKSFQLTEA 59 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHH-QTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + A ++ + L + P L A + +++P Sbjct: 60 GKLLSEKGAFLLKSFDYLQKTLKECIDGERGIVRIGVMEPTASYRLPAWLRAFRKQHPNI 119 Query: 127 TIKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 ++ +D + RG++D +E LFS+ + Sbjct: 120 LFNIQIHSNQMLVDMVERGDIDAALCATPDTMTGA----------SFEPLFSEEVVLLTP 169 Query: 186 KDHPALHQTW-NLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 HP ++ +L P + L+ L ELG + + Sbjct: 170 SSHPLAQRSVIHLRDLAHEPLLVTNAACPFRRHLEKRLVELGIQPLYQTEISNMLALKHY 229 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLW-HKRNSHNPK 303 L +A P+ + ++ + +L + +P Sbjct: 230 VQAS--LGIAVVPKITVTPPPDGTV--------IQPIADFRVGLTVGMLRLLASETVHPA 279 Query: 304 IVWLRETIK 312 + + Sbjct: 280 TETWIDFLL 288 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.313 0.206 0.622 Lambda K H 0.267 0.0631 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 3,303,694,864 Number of Sequences: 3077464 Number of extensions: 252852965 Number of successful extensions: 950852 Number of sequences better than 1.0e-01: 1000 Number of HSP's better than 0.1 without gapping: 23517 Number of HSP's successfully gapped in prelim test: 3283 Number of HSP's that attempted gapping in prelim test: 858373 Number of HSP's gapped (non-prelim): 31205 length of query: 319 length of database: 1,040,396,356 effective HSP length: 128 effective length of query: 191 effective length of database: 646,480,964 effective search space: 123477864124 effective search space used: 123477864124 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (20.8 bits) S2: 94 (40.2 bits)