BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (319 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_A7ZTR6 HTH-type transcriptional regulator yidZ n=122 Ta... 651 0.0 UniRef50_Q0SYQ0 Putative transcriptional regulator LYSR-type n=1... 379 e-104 UniRef50_C2LG43 LysR-family transcriptional regulator n=4 Tax=En... 336 8e-91 UniRef50_A0KKG7 HTH-type transcriptional regulator YidZ n=3 Tax=... 332 2e-89 UniRef50_A7N4D7 Putative uncharacterized protein n=1 Tax=Vibrio ... 277 4e-73 UniRef50_A5F4D9 Transcriptional regulator, LysR family n=68 Tax=... 171 4e-41 UniRef50_A4SSQ1 Transcriptional regulator, LysR family n=2 Tax=A... 162 2e-38 UniRef50_A3QJ07 Transcriptional regulator, LysR family n=25 Tax=... 161 3e-38 UniRef50_B7VQ45 Transcriptional regulator n=8 Tax=Vibrionales Re... 145 3e-33 UniRef50_A8GZD3 Transcriptional regulator, LysR family n=22 Tax=... 139 1e-31 UniRef50_A6VUW1 Transcriptional regulator, LysR family n=2 Tax=M... 129 1e-28 UniRef50_Q210Z5 Transcriptional regulator, LysR family n=2 Tax=A... 118 3e-25 UniRef50_A9FW21 Transcriptional regulator, LysR family n=2 Tax=M... 117 6e-25 UniRef50_C3KKF8 Putative transcriptional regulatory protein, Lys... 116 1e-24 UniRef50_A9G5G2 Nodulation protein D n=2 Tax=Proteobacteria RepI... 116 1e-24 UniRef50_A3Y7F5 Transcriptional regulator n=1 Tax=Marinomonas sp... 115 1e-24 UniRef50_Q1Z9L0 Putative transcriptional regulator, LysR family ... 110 7e-23 UniRef50_UPI0001B54141 LysR family transcriptional regulator n=1... 109 1e-22 UniRef50_A1WMY5 Transcriptional regulator, LysR family n=1 Tax=V... 109 1e-22 UniRef50_A9CLK9 Transcriptional regulator, LysR family n=2 Tax=A... 109 1e-22 UniRef50_A3YE73 Putative transcriptional regulator, LysR family ... 109 2e-22 UniRef50_Q473Q1 Transcriptional regulator, LysR family n=9 Tax=B... 108 3e-22 UniRef50_Q2S7V2 Transcriptional regulator n=1 Tax=Hahella chejue... 107 5e-22 UniRef50_A9GLW1 Transcriptional regulator, LysR family n=1 Tax=S... 107 7e-22 UniRef50_A9C385 Transcriptional regulator, LysR family n=2 Tax=c... 106 9e-22 UniRef50_B1LYW9 Transcriptional regulator, LysR family n=10 Tax=... 106 1e-21 UniRef50_Q7W2A6 Transcriptional regulator n=3 Tax=Bordetella Rep... 106 1e-21 UniRef50_C5CVL6 Transcriptional regulator, LysR family n=5 Tax=c... 104 4e-21 UniRef50_A4Z170 Putative transcriptional regulatory protein, Lys... 104 4e-21 UniRef50_Q30XG7 Conserved hypothetical transcriptional regulator... 103 7e-21 UniRef50_A6UK78 Transcriptional regulator, LysR family n=2 Tax=S... 103 8e-21 UniRef50_A4YPA1 Putative transcriptional regulator, LysR family ... 103 9e-21 UniRef50_A4XX96 Transcriptional regulator, LysR family n=3 Tax=P... 103 1e-20 UniRef50_A6X639 Transcriptional regulator, LysR family n=1 Tax=O... 102 2e-20 UniRef50_Q08NF6 Transcriptional Regulator, LysR family n=1 Tax=S... 102 2e-20 UniRef50_B9B1S8 Transcriptional regulator, LysR family n=1 Tax=B... 102 2e-20 UniRef50_A6VSJ2 Transcriptional regulator, LysR family n=28 Tax=... 101 3e-20 UniRef50_A5WDE8 Transcriptional regulator, LysR family n=1 Tax=P... 101 3e-20 UniRef50_A3RSL5 Transcriptional regulators, LysR family n=4 Tax=... 101 4e-20 UniRef50_Q393U0 Transcriptional regulator, LysR family n=6 Tax=B... 101 4e-20 UniRef50_A0LD88 Transcriptional regulator, LysR family n=1 Tax=M... 101 4e-20 UniRef50_Q4KHX1 Transcriptional regulator, LysR family n=1 Tax=P... 101 4e-20 UniRef50_Q12M05 Transcriptional regulator n=3 Tax=Gammaproteobac... 100 1e-19 UniRef50_A9BZQ9 Transcriptional regulator, LysR family n=1 Tax=D... 100 1e-19 UniRef50_B7CP85 Transcriptional regulator, LysR family protein n... 99 1e-19 UniRef50_C6BS61 Transcriptional regulator, LysR family n=1 Tax=D... 99 1e-19 UniRef50_Q13YH7 Transcriptional regulator, LysR family n=12 Tax=... 99 2e-19 UniRef50_Q7MCZ8 Transcriptional regulator n=13 Tax=Vibrionaceae ... 99 2e-19 UniRef50_A9GGP1 LysR-family transcriptional regulator n=1 Tax=So... 99 2e-19 UniRef50_P52698 HTH-type transcriptional regulator phcA n=16 Tax... 99 2e-19 UniRef50_A0LD87 Transcriptional regulator, LysR family n=1 Tax=M... 99 2e-19 UniRef50_B9Z7Z3 Transcriptional regulator, LysR family n=3 Tax=P... 99 3e-19 UniRef50_C7RKX8 Transcriptional regulator, LysR family n=20 Tax=... 98 4e-19 UniRef50_Q15UP0 Transcriptional regulator, LysR family n=4 Tax=A... 97 6e-19 UniRef50_A2SDX3 Transcriptional regulator, LysR family n=6 Tax=B... 97 7e-19 UniRef50_C6XIT5 Transcriptional regulator, LysR family n=1 Tax=H... 97 9e-19 UniRef50_B8CHD0 Regulatory protein, LysR:LysR, substrate-binding... 97 9e-19 UniRef50_D0XC19 Putative uncharacterized protein n=1 Tax=Vibrio ... 97 1e-18 UniRef50_Q13GK2 Transcriptional regulator, LysR family n=1 Tax=B... 96 1e-18 UniRef50_A6FYP7 Transcriptional regulator, LysR family protein n... 96 1e-18 UniRef50_Q7VQS7 LysR-family transcriptional regulator n=2 Tax=Ca... 96 1e-18 UniRef50_B6R1K2 Transcriptional regulator, LysR family n=1 Tax=P... 96 1e-18 UniRef50_B0BQD1 HTH-type transcriptional activator n=15 Tax=Prot... 96 1e-18 UniRef50_A9AQX4 Transcriptional regulator, LysR family n=20 Tax=... 96 2e-18 UniRef50_D2B6V0 LysR family transcriptional regulator n=5 Tax=Ac... 96 2e-18 UniRef50_A1WRT3 Transcriptional regulator, LysR family n=1 Tax=V... 96 2e-18 UniRef50_B7RV99 Transcriptional regulator, LysR family protein n... 96 2e-18 UniRef50_A0KFY0 Transcriptional regulator, LysR family n=2 Tax=A... 96 2e-18 UniRef50_A8FU12 Transcriptional regulator n=2 Tax=Gammaproteobac... 96 2e-18 UniRef50_Q12H69 Transcriptional regulator, LysR family n=14 Tax=... 95 3e-18 UniRef50_Q2S713 Transcriptional regulator n=1 Tax=Hahella chejue... 95 3e-18 UniRef50_A0NZC9 LysR family regulatory protein n=3 Tax=Rhodobact... 95 4e-18 UniRef50_B6JAE3 MexT protein n=1 Tax=Oligotropha carboxidovorans... 95 4e-18 UniRef50_Q89IY7 Transcriptional regulatory protein n=1 Tax=Brady... 95 4e-18 UniRef50_A8H9L3 Transcriptional regulator, LysR family n=5 Tax=S... 95 4e-18 UniRef50_B7RWY7 LysR substrate binding domain protein n=2 Tax=un... 94 5e-18 UniRef50_B1KAV0 Transcriptional regulator, LysR family n=5 Tax=B... 94 5e-18 UniRef50_C9PC13 Transcriptional regulator LysR family n=1 Tax=Vi... 94 5e-18 UniRef50_A5F3E5 Transcriptional regulator, LysR family n=29 Tax=... 94 5e-18 UniRef50_A9FB16 Transcriptional regulator, LysR family n=3 Tax=S... 94 5e-18 UniRef50_UPI0000383CFA COG0583: Transcriptional regulator n=1 Ta... 94 6e-18 UniRef50_A6T413 Transcriptional regulator, LysR family n=1 Tax=J... 94 6e-18 UniRef50_Q88I06 Nodulation protein d1 n=4 Tax=Gammaproteobacteri... 94 6e-18 UniRef50_C0ZNV8 Putative LysR family transcriptional regulator n... 94 6e-18 UniRef50_D0LKM3 Transcriptional regulator, LysR family n=1 Tax=H... 94 8e-18 UniRef50_B1K4K0 Transcriptional regulator, LysR family n=3 Tax=B... 94 9e-18 UniRef50_A1U8Q8 Transcriptional regulator, LysR family n=1 Tax=M... 93 1e-17 UniRef50_A6CYZ8 Hypothetical transcriptional regulator, LysR fam... 93 1e-17 UniRef50_A6GJJ5 Regulatory protein, LysR:LysR, substrate-binding... 93 1e-17 UniRef50_Q1GMN1 Transcriptional regulator, LysR family n=1 Tax=R... 93 1e-17 UniRef50_Q471I4 Regulatory protein, LysR:LysR, substrate-binding... 93 1e-17 UniRef50_B9Z480 Transcriptional regulator, LysR family n=1 Tax=L... 93 1e-17 UniRef50_Q2IYM8 Transcriptional regulator, LysR family n=2 Tax=R... 93 1e-17 UniRef50_B5ZKB2 Transcriptional regulator, LysR family n=2 Tax=G... 93 1e-17 UniRef50_B1MJW3 Putative transcriptional regulator, LysR family ... 92 2e-17 UniRef50_D0RY94 Transcriptional regulator n=4 Tax=Acinetobacter ... 92 2e-17 UniRef50_Q4KKE5 Transcriptional regulator, LysR family n=27 Tax=... 92 2e-17 UniRef50_A8GG55 Transcriptional regulator, LysR family n=1 Tax=S... 92 2e-17 UniRef50_A8IJ97 Putative transcriptional regulator n=1 Tax=Azorh... 92 2e-17 UniRef50_Q7MNI1 Transcriptional regulator n=5 Tax=Gammaproteobac... 92 2e-17 UniRef50_A6CVD4 Transcriptional regulator, LysR family protein n... 92 3e-17 UniRef50_Q2SHJ0 Transcriptional regulator n=1 Tax=Hahella chejue... 92 3e-17 UniRef50_B1J7P4 Transcriptional regulator, LysR family n=5 Tax=P... 91 4e-17 UniRef50_Q1LD16 Transcriptional regulator, LysR family n=8 Tax=P... 91 4e-17 UniRef50_B3QAJ4 Transcriptional regulator, LysR family n=4 Tax=A... 91 5e-17 UniRef50_A0R6U4 Transcriptional regulator, LysR family protein n... 91 5e-17 UniRef50_A5VCH0 Transcriptional regulator, LysR family n=1 Tax=S... 91 6e-17 UniRef50_A5V8P8 Transcriptional regulator, LysR family n=1 Tax=S... 91 6e-17 UniRef50_Q0BPL7 Transcriptional regulators, LysR family n=1 Tax=... 91 7e-17 UniRef50_B5F9Z3 Transcriptional regulator, LysR family n=3 Tax=V... 91 7e-17 UniRef50_Q2CCM2 Transcriptional regulator, LysR family protein n... 90 8e-17 UniRef50_A3YHF6 Transcriptional regulatory protein n=2 Tax=Gamma... 90 8e-17 UniRef50_P52679 PCP degradation transcriptional activation prote... 90 8e-17 UniRef50_D1TCI7 LysR family transcriptional regulator n=2 Tax=Bu... 90 9e-17 UniRef50_C9NXV6 Transcriptional regulator LysR family n=1 Tax=Vi... 90 1e-16 UniRef50_A5CSX6 Putative transcriptional regulator, LysR family ... 90 1e-16 UniRef50_B0C7Y6 Transcriptional regulator, LysR family n=1 Tax=A... 90 1e-16 UniRef50_Q0ARX0 Transcriptional regulator, LysR family n=1 Tax=M... 89 2e-16 UniRef50_D0XGK1 Putative uncharacterized protein n=1 Tax=Vibrio ... 89 2e-16 UniRef50_P10183 HTH-type transcriptional activator nahR n=67 Tax... 89 2e-16 UniRef50_B7VU21 Transcriptional regulators, LysR family n=1 Tax=... 89 2e-16 UniRef50_Q7MQI2 Transcriptional regulator n=36 Tax=Gammaproteoba... 89 3e-16 UniRef50_B2JFW9 Transcriptional regulator, LysR family n=39 Tax=... 89 3e-16 UniRef50_C6ARG9 Transcriptional regulator, LysR family n=7 Tax=P... 89 3e-16 UniRef50_A8KZI9 Transcriptional regulator, LysR family n=4 Tax=A... 88 3e-16 UniRef50_Q5QVJ9 Transcriptional regulator, LysR family n=1 Tax=I... 88 3e-16 UniRef50_Q0BYJ0 Transcriptional regulator, LysR family n=1 Tax=H... 88 4e-16 UniRef50_A1UYR8 Transcriptional regulator, LysR family n=32 Tax=... 88 4e-16 UniRef50_Q11CG0 Transcriptional regulator, LysR family n=1 Tax=C... 88 4e-16 UniRef50_B6RAE8 Transcriptional Regulator, LysR family n=1 Tax=P... 88 5e-16 UniRef50_D2YJX0 Transcriptional regulator, LysR family n=1 Tax=V... 87 5e-16 UniRef50_A6D744 Putative transcriptional regulator n=1 Tax=Vibri... 87 6e-16 UniRef50_A6AT33 Transcriptional regulator n=2 Tax=Vibrio harveyi... 87 7e-16 UniRef50_Q391B6 Transcriptional regulator, LysR family n=1 Tax=B... 87 8e-16 UniRef50_A6F7C1 Transcriptional regulator n=1 Tax=Moritella sp. ... 87 8e-16 UniRef50_A3Y808 Transcriptional regulator, LysR family protien n... 87 9e-16 UniRef50_C4UEX0 Lys-R type regulatory protein n=1 Tax=Yersinia r... 87 1e-15 UniRef50_C5CZY6 Transcriptional regulator, LysR family n=1 Tax=V... 87 1e-15 UniRef50_B8ERS8 Transcriptional regulator, LysR family n=1 Tax=M... 87 1e-15 UniRef50_Q7NT25 Probable transcription regulator protein n=1 Tax... 86 1e-15 UniRef50_B4ELV6 LysR family regulatory protein n=1 Tax=Burkholde... 86 1e-15 UniRef50_B6R352 Transcriptional regulator, LysR family n=1 Tax=P... 86 2e-15 UniRef50_B4X4B4 LysR substrate binding domain protein n=1 Tax=Al... 86 2e-15 UniRef50_A1U2R6 Transcriptional regulator, LysR family n=3 Tax=M... 86 2e-15 UniRef50_A0AZD8 Transcriptional regulator, LysR family n=17 Tax=... 86 2e-15 UniRef50_A0Z258 Transcriptional regulator, LysR family protein n... 86 2e-15 UniRef50_B7QWJ8 Transcriptional regulator, LysR family n=1 Tax=R... 86 2e-15 UniRef50_B4RWU1 Transcriptional regulator n=2 Tax=Alteromonas ma... 86 2e-15 UniRef50_C5AL93 Transcriptional regulator, LysR family protein n... 86 2e-15 UniRef50_B7WQP0 Transcriptional regulator, LysR family n=1 Tax=C... 86 2e-15 UniRef50_Q1YVH2 Transcriptional regulator, LysR family protein n... 85 3e-15 UniRef50_C5B758 Transcriptional regulator, LysR family, putative... 85 3e-15 UniRef50_B7VQV6 Transcriptional regulator n=10 Tax=Vibrionales R... 85 3e-15 UniRef50_B9Z947 Transcriptional regulator, LysR family n=1 Tax=L... 85 3e-15 UniRef50_A1R1P0 Putative transcriptional regulator, LysR family ... 85 4e-15 UniRef50_D0LUZ7 Transcriptional regulator, LysR family n=1 Tax=H... 85 4e-15 UniRef50_B7RZL5 Transcriptional regulator, LysR family protein n... 85 4e-15 UniRef50_Q7MC61 Transcriptional regulator n=9 Tax=Gammaproteobac... 84 4e-15 UniRef50_A0KG94 Transcriptional regulator, LysR family n=5 Tax=G... 84 5e-15 UniRef50_A9F0I7 Transcriptional regulator, LysR family n=20 Tax=... 84 6e-15 UniRef50_Q7WJY9 Probable LysR-family transcription regulator n=1... 84 6e-15 UniRef50_B0C5B7 Transcriptional regulator, LysR-family n=1 Tax=A... 84 6e-15 UniRef50_B0KG68 Transcriptional regulator, LysR family n=9 Tax=P... 84 7e-15 UniRef50_A6EYC4 LysR family regulatory protein n=1 Tax=Marinobac... 84 7e-15 UniRef50_B4E7M9 LysR family regulatory protein n=1 Tax=Burkholde... 84 8e-15 UniRef50_A5W6Q9 Transcriptional regulator, LysR family n=12 Tax=... 84 8e-15 UniRef50_Q46T42 Regulatory protein, LysR:LysR, substrate-binding... 84 8e-15 UniRef50_A0KIB7 Transcriptional regulator, LysR family n=2 Tax=A... 84 8e-15 UniRef50_A8H854 Transcriptional regulator, LysR family n=1 Tax=S... 84 9e-15 UniRef50_B3YF82 Transcriptional regulator, LysR family n=2 Tax=S... 84 1e-14 UniRef50_D0YJS8 Transcriptional regulator, LysR family n=2 Tax=K... 83 1e-14 UniRef50_A6FY23 Transcriptional regulator, LysR family protein n... 83 1e-14 UniRef50_Q1ZAU1 Transcriptional regulator, LysR family protein n... 83 1e-14 UniRef50_P55733 HTH-type transcriptional regulator syrM 2 n=13 T... 83 1e-14 UniRef50_A3Y6R5 Transcriptional regulator, LysR family protein n... 83 1e-14 UniRef50_A6EW06 Transcriptional regulator n=2 Tax=Marinobacter R... 83 1e-14 UniRef50_Q87I72 Putative transcriptional regulator, LysR family ... 83 2e-14 UniRef50_Q1XGL2 Transcriptional activator NahR n=3 Tax=root RepI... 83 2e-14 UniRef50_A3VAM0 Nodulation protein d1 n=1 Tax=Rhodobacterales ba... 82 2e-14 UniRef50_C9QF24 Transcriptional regulators LysR family n=1 Tax=V... 82 2e-14 UniRef50_A8GKS5 Transcriptional regulator, LysR family n=1 Tax=S... 82 2e-14 UniRef50_A1U1I0 Transcriptional regulator, LysR family n=67 Tax=... 82 2e-14 UniRef50_D0LQN8 Transcriptional regulator, LysR family n=1 Tax=H... 82 2e-14 UniRef50_A5VBV3 Transcriptional regulator, LysR family n=1 Tax=S... 82 2e-14 UniRef50_D1P3H6 Transcriptional regulator, LysR family n=1 Tax=P... 82 2e-14 UniRef50_Q2G901 Transcriptional regulator, LysR family n=2 Tax=A... 82 2e-14 UniRef50_Q2KYC5 LysR-family transcriptional regulator n=9 Tax=Bu... 82 2e-14 UniRef50_Q5LKP3 Transcriptional regulator, LysR family n=1 Tax=R... 82 2e-14 UniRef50_A1W256 Transcriptional regulator, LysR family n=2 Tax=C... 82 3e-14 UniRef50_D1SW87 Transcriptional regulator, LysR family n=1 Tax=A... 82 3e-14 UniRef50_B7VJR0 Transcriptional regulator n=7 Tax=Vibrionaceae R... 82 3e-14 UniRef50_Q15TE0 Transcriptional regulator, LysR family n=4 Tax=A... 82 3e-14 UniRef50_C8WFJ3 Transcriptional regulator, LysR family n=3 Tax=Z... 82 3e-14 UniRef50_A4SH82 Transcriptional regulator, LysR family n=2 Tax=A... 82 4e-14 UniRef50_Q38ZY8 Transcriptional regulator, LysR family n=1 Tax=B... 82 4e-14 UniRef50_Q2BJ61 Transcriptional regulator, LysR family protein n... 81 4e-14 UniRef50_Q3KA14 LysR family regulatory protein n=24 Tax=Bacteria... 81 4e-14 UniRef50_Q0SCY7 Transcriptional regulator, LysR family protein n... 81 5e-14 UniRef50_Q0VLU8 Transcriptional regulator, LysR family n=2 Tax=A... 81 6e-14 UniRef50_C6DDI5 Transcriptional regulator, LysR family n=4 Tax=E... 80 8e-14 UniRef50_B9QVA6 LysR substrate binding domain protein n=1 Tax=La... 80 8e-14 UniRef50_P30979 Uncharacterized HTH-type transcriptional regulat... 80 8e-14 UniRef50_A9AQZ4 Transcriptional regulator, LysR family n=24 Tax=... 80 8e-14 UniRef50_Q88LJ0 Transcriptional regulator, LysR family n=1 Tax=P... 80 9e-14 UniRef50_Q1M9F6 Putative LysR-family transcriptional regulator n... 80 9e-14 UniRef50_D2C014 Transcriptional regulator, LysR family n=1 Tax=D... 80 9e-14 UniRef50_A1U796 Transcriptional regulator, LysR family n=3 Tax=M... 80 9e-14 UniRef50_A6W2N0 Transcriptional regulator, LysR family n=1 Tax=M... 80 9e-14 UniRef50_Q8YZV2 Transcriptional regulator n=2 Tax=Nostocaceae Re... 80 1e-13 UniRef50_A4JED2 Transcriptional regulator, LysR family n=9 Tax=P... 80 1e-13 UniRef50_C3MFM7 Putative transcriptional regulator, LysR family ... 80 1e-13 UniRef50_B8IVY8 Transcriptional regulator, LysR family n=4 Tax=P... 80 1e-13 UniRef50_B8KV86 Putative transcriptional regulator, LysR family ... 79 1e-13 UniRef50_Q391Q9 Transcriptional regulator, LysR family n=1 Tax=B... 79 2e-13 UniRef50_Q7MG62 Transcriptional regulator n=6 Tax=Vibrionales Re... 79 2e-13 UniRef50_D0DE94 Transcriptional regulator, LysR family n=1 Tax=C... 79 2e-13 UniRef50_B0SY67 Transcriptional regulator, LysR family n=1 Tax=C... 79 2e-13 UniRef50_Q46YJ7 Transcriptional regulator, LysR family n=5 Tax=c... 79 2e-13 UniRef50_Q15Y73 Transcriptional regulator, LysR family n=1 Tax=P... 79 2e-13 UniRef50_Q8XRG7 Probable transcriptional regulator transcription... 79 2e-13 UniRef50_A9AMZ1 Transcriptional regulator, LysR family n=6 Tax=P... 79 2e-13 UniRef50_Q13QG3 Transcriptional regulator, LysR family n=9 Tax=P... 79 2e-13 UniRef50_Q486J0 Transcriptional regulator, LysR family n=4 Tax=G... 79 3e-13 UniRef50_C5CZA2 Transcriptional regulator, LysR family n=1 Tax=V... 79 3e-13 UniRef50_C5CV67 Transcriptional regulator, LysR family n=1 Tax=V... 79 3e-13 UniRef50_Q5P743 Transcriptional regulator, LysR family n=2 Tax=B... 79 3e-13 UniRef50_B7V4S2 Probable transcriptional regulator n=7 Tax=Pseud... 79 3e-13 UniRef50_C6B2W9 Transcriptional regulator, LysR family n=4 Tax=R... 79 3e-13 UniRef50_A9FJR3 Transcriptional regulator, LysR family n=2 Tax=S... 79 3e-13 UniRef50_B7X552 Transcriptional regulator, LysR family n=1 Tax=C... 78 3e-13 UniRef50_A6CYC8 Probable transcription regulator protein n=1 Tax... 78 3e-13 UniRef50_B9QU66 LysR substrate binding domain protein n=1 Tax=La... 78 4e-13 UniRef50_C9PE36 Probable transcription regulator protein n=2 Tax... 78 4e-13 UniRef50_A1K8D7 Transcriptional regulator, LysR family n=1 Tax=A... 78 4e-13 UniRef50_Q081K6 Transcriptional regulator, LysR family n=2 Tax=A... 78 4e-13 UniRef50_Q15XJ4 Transcriptional regulator, LysR family n=1 Tax=P... 78 4e-13 UniRef50_B5XYZ1 Transcriptional regulator, LysR family n=5 Tax=K... 78 4e-13 UniRef50_Q2BLC9 LysR family regulatory protein n=1 Tax=Neptuniib... 78 5e-13 UniRef50_Q1N663 Regulatory protein, LysR:LysR, substrate-binding... 78 5e-13 UniRef50_Q2P1D7 Transcriptional regulator n=5 Tax=Xanthomonas Re... 77 5e-13 UniRef50_B5ZWA1 Transcriptional regulator, LysR family n=4 Tax=R... 77 5e-13 UniRef50_C5A8T0 Transcriptional regulator, LysR family protein n... 77 6e-13 UniRef50_UPI0001BCC5DA LysR family transcriptional regulator n=1... 77 6e-13 UniRef50_Q5LN55 Transcriptional regulator, LysR family n=4 Tax=R... 77 7e-13 UniRef50_Q7MEK1 Transcriptional regulator n=15 Tax=Vibrionaceae ... 77 8e-13 UniRef50_A1UXD8 Transcriptional regulator, LysR family n=41 Tax=... 77 8e-13 UniRef50_A6V5Q0 MexT protein n=1 Tax=Pseudomonas aeruginosa PA7 ... 77 8e-13 UniRef50_B2JTT0 Transcriptional regulator, LysR family n=3 Tax=B... 77 1e-12 UniRef50_B9K0N9 Transcriptional regulator LysR family n=1 Tax=Ag... 77 1e-12 UniRef50_Q9FD34 PnbR n=2 Tax=Pseudomonas RepID=Q9FD34_PSEPU 77 1e-12 >UniRef50_A7ZTR6 HTH-type transcriptional regulator yidZ n=122 Tax=Gammaproteobacteria RepID=YIDZ_ECO24 Length = 319 Score = 651 bits (1679), Expect = 0.0, Method: Compositional matrix adjust. Identities = 316/319 (99%), Positives = 319/319 (100%) Query: 1 MKKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPL 60 MKKSITTLDLNLLLCLQLLMQERSVTKAAKR+NVTPSAVSKSLAKLRAWFDDPLFVNSPL Sbjct: 1 MKKSITTLDLNLLLCLQLLMQERSVTKAAKRMNVTPSAVSKSLAKLRAWFDDPLFVNSPL 60 Query: 61 GLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIY 120 GLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSK+IY Sbjct: 61 GLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKRIY 120 Query: 121 QRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 QRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP Sbjct: 121 QRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 Query: 181 CVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQ 240 CVWLRKDHPALH+TWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQ Sbjct: 181 CVWLRKDHPALHETWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQ 240 Query: 241 SLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 SLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH Sbjct: 241 SLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 Query: 301 NPKIVWLRETIKNLYASMA 319 NPKIVWLRETIKNLYASMA Sbjct: 301 NPKIVWLRETIKNLYASMA 319 >UniRef50_Q0SYQ0 Putative transcriptional regulator LYSR-type n=1 Tax=Shigella flexneri 5 str. 8401 RepID=Q0SYQ0_SHIF8 Length = 200 Score = 379 bits (973), Expect = e-104, Method: Compositional matrix adjust. Identities = 181/186 (97%), Positives = 184/186 (98%) Query: 32 INVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSMEQNLAEWMQMSNLLLDKPHH 91 +NVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPT LMVSMEQNLAEWMQMSNLLLDKPHH Sbjct: 1 MNVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTQLMVSMEQNLAEWMQMSNLLLDKPHH 60 Query: 92 QTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQATIKLRNWDYDSLDAITRGEVDIGFS 151 QTPRGLKFELAAESPLMMIMLNALSK+IYQRYPQATIKLRNWDYDSLDAITRGEVDIGFS Sbjct: 61 QTPRGLKFELAAESPLMMIMLNALSKRIYQRYPQATIKLRNWDYDSLDAITRGEVDIGFS 120 Query: 152 GRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPALHQTWNLDTFLRYPHISICWE 211 GRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPALH+TWNLDTFLRYPHISICWE Sbjct: 121 GRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPALHETWNLDTFLRYPHISICWE 180 Query: 212 QSDTWA 217 QSDTW Sbjct: 181 QSDTWV 186 >UniRef50_C2LG43 LysR-family transcriptional regulator n=4 Tax=Enterobacteriaceae RepID=C2LG43_PROMI Length = 323 Score = 336 bits (861), Expect = 8e-91, Method: Compositional matrix adjust. Identities = 157/310 (50%), Positives = 224/310 (72%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 K + +DLNLL+ Q+L+QERSVT AAK ++++PSAVSK+LAKLR WFDDPLF+ SP GL Sbjct: 4 KPLHRIDLNLLVIFQILLQERSVTLAAKWLSISPSAVSKALAKLRIWFDDPLFIRSPQGL 63 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQR 122 PTPL +S+E +L++++ +S+ + +K + + P GLKF L E+PL +ML +L +QI Sbjct: 64 IPTPLSLSIEDSLSDFINISHHIANKRNTEVPVGLKFNLVLETPLHQVMLPSLPQQILSH 123 Query: 123 YPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCV 182 YP++T++++NW+Y+SL I GEVDIG GRE + RS+ELL LP IDYE+LF D+P V Sbjct: 124 YPKSTLQIKNWEYNSLSNIIDGEVDIGLVGREYYSRSKELLELLPDVIDYEILFDDIPLV 183 Query: 183 WLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 +L K+HP + W+L+ FL + +S +++ WALDN+L+E+ + R IA++ FEQSL Sbjct: 184 YLHKNHPLMKMKWDLNNFLSFSQVSTEYDKQSHWALDNILKEMNKSRQIAITYTSFEQSL 243 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 FM +QPD+ L+ AP YC+YY + H +V LP+P +L +PF LLWHKRNSHN Sbjct: 244 FMISQPDHQLITCAPGYCRYYVKTHFPDIVTLPIPLPPVFLDQLHLPFVLLWHKRNSHNT 303 Query: 303 KIVWLRETIK 312 KI+WLR TI+ Sbjct: 304 KIIWLRNTIR 313 >UniRef50_A0KKG7 HTH-type transcriptional regulator YidZ n=3 Tax=Aeromonas RepID=A0KKG7_AERHH Length = 324 Score = 332 bits (850), Expect = 2e-89, Method: Compositional matrix adjust. Identities = 157/313 (50%), Positives = 215/313 (68%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 + + LDLNLL+ +LL+QERSVTKAAK++NVT VSK+LA+LR WFDDPLF+ + GL Sbjct: 2 RPLIDLDLNLLVVFRLLLQERSVTKAAKKLNVTAPTVSKALARLRDWFDDPLFLRTQRGL 61 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQR 122 PT L +++E+ L EW Q+S + + P G F L ESP + LN L IY+ Sbjct: 62 EPTNLSLTLEEELKEWFQLSGNIASLCGNAIPAGAAFRLVLESPFYISFLNDLPMVIYET 121 Query: 123 YPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCV 182 Y ++TI++ NWD+ SL+ I G+ D+GF RE+HP S ++ LP ID+EVLF D P V Sbjct: 122 YRKSTIRIMNWDHHSLNDIINGDADLGFCARETHPSSLARVNRLPYYIDHEVLFEDRPMV 181 Query: 183 WLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 +LRKDHP L +TWNLD FL YPH+S+ WE SD WALD++L + G R + + + FEQ+L Sbjct: 182 FLRKDHPLLARTWNLDNFLAYPHVSVVWEASDAWALDSLLDDEGLSRQVPIRVSSFEQAL 241 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 +AAQ D+ L+A P YC Y + H L++LPLP DE+ ++L++ F LLWHKRN+HN Sbjct: 242 HIAAQSDHELIAVVPSYCASYARQHHNNLISLPLPLDEALYRQLDIAFILLWHKRNNHNT 301 Query: 303 KIVWLRETIKNLY 315 K++WLR+ IK LY Sbjct: 302 KVLWLRDEIKRLY 314 >UniRef50_A7N4D7 Putative uncharacterized protein n=1 Tax=Vibrio harveyi ATCC BAA-1116 RepID=A7N4D7_VIBHB Length = 212 Score = 277 bits (708), Expect = 4e-73, Method: Compositional matrix adjust. Identities = 126/212 (59%), Positives = 167/212 (78%) Query: 108 MMIMLNALSKQIYQRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLP 167 M+ +L+ L I+QRYP A +K RNWDYDSLDAI RGE DIGF+GRES+PRS+E L LP Sbjct: 1 MLTILDELLIAIHQRYPDAKVKTRNWDYDSLDAIVRGEADIGFTGRESYPRSKESLDLLP 60 Query: 168 LAIDYEVLFSDVPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGR 227 +D+EVLFSD+P V+L K+HPAL Q WNL+TFL Y HI+I WE+S+TWALD VL ELG Sbjct: 61 YFLDFEVLFSDLPMVYLHKNHPALEQAWNLETFLSYQHINIVWEKSETWALDEVLSELGL 120 Query: 228 ERTIAMSLPEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLE 287 +R+I +++ FEQSLFMAAQP + +L TAP+Y + Y + LV LP+P +++QQ KL Sbjct: 121 QRSIGLTMSSFEQSLFMAAQPHHNMLTTAPQYGESYTKKLHPDLVCLPIPLEQTQQDKLL 180 Query: 288 VPFTLLWHKRNSHNPKIVWLRETIKNLYASMA 319 +PFT++WHKRN++NPK+VWLR TIK+L++S + Sbjct: 181 IPFTMIWHKRNAYNPKLVWLRNTIKSLFSSQS 212 >UniRef50_A5F4D9 Transcriptional regulator, LysR family n=68 Tax=Gammaproteobacteria RepID=A5F4D9_VIBC3 Length = 327 Score = 171 bits (432), Expect = 4e-41, Method: Compositional matrix adjust. Identities = 104/316 (32%), Positives = 172/316 (54%), Gaps = 17/316 (5%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 + + +DLNLL+CL++L++E SVT+AA R+ ++ SAVSKSLAKLR FDDPLFV + GL Sbjct: 18 EKLARIDLNLLVCLKVLIEELSVTRAAARLCLSQSAVSKSLAKLREQFDDPLFVRTSYGL 77 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQIY 120 + TP + ++ L + LL +P H +P+ +F++AA + +++ I+ Sbjct: 78 NATPKALFLKPKLDVLVNQLE-LLTQPAHFSPQSSEYRFQIAAVESVYPLIMPYFLPTIF 136 Query: 121 QRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 + P +I W + + GE+D G +G++ +L P I + ++ D Sbjct: 137 RHGPHLSISTHAWTEQTFRKLQVGELDFGLTGKDIDINDAKLTLLPPADICEQEIYRDNQ 196 Query: 181 CVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQ 240 +R+ HP L WNL ++L H+ + + +D W LD L +LG ER IA+++P+F Sbjct: 197 RCVVRRGHPVLQYDWNLSSYLNLRHVQVRCDGNDRWLLDYRLADLGYERDIAITVPDFNS 256 Query: 241 SLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVP---FTLLWHKR 297 + + D + TAP + ++ Q+ LV LPLP +E P +TL WH+ Sbjct: 257 AASLCTYTD--FIFTAPSHFTHWVA-KQMDLVELPLP--------MEFPPMAYTLFWHRE 305 Query: 298 NSHNPKIVWLRETIKN 313 ++P + WLRE I+ Sbjct: 306 RENDPALRWLRELIQT 321 >UniRef50_A4SSQ1 Transcriptional regulator, LysR family n=2 Tax=Aeromonas RepID=A4SSQ1_AERS4 Length = 322 Score = 162 bits (409), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 108/319 (33%), Positives = 174/319 (54%), Gaps = 14/319 (4%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 + + +DLNLL+ LQ+L++ER+ ++AA+R++++ SAVSK+L +LR FDDPLFV S GL Sbjct: 4 EQLGRIDLNLLIILQVLLEERNGSRAARRLHLSQSAVSKALGRLRETFDDPLFVRSAYGL 63 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQ---TPRGLKFELAAESPLMMIMLNALSKQI 119 PT + ++Q L + + L+ P T R +F +A+ + ++ Sbjct: 64 EPTARALVLQQQLQPILLSLDNLIQPPDFDPASTER--EFVIASMDSAFTLFAPLYLSEL 121 Query: 120 YQRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 ++ P ++ W +SL +++G+VDI F+ RE+ S L +LP AI +L D Sbjct: 122 KRQAPGIRLRYEEWTENSLTEMSQGQVDIAFTVRENCISSDFRLDTLPNAICQRLLAIDD 181 Query: 180 PCVWLRKDHPALHQ-TWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEF 238 ++ DHPALH+ W+L +L YPH+ E D W LD+ L + R I ++P F Sbjct: 182 LTCLVQHDHPALHEPEWDLARYLAYPHVQTYCEGRDRWMLDHKLAGMDLYRRIEATVPSF 241 Query: 239 EQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRN 298 E +L M D +++ + Y ++ Q++ PLV LPLP L L+WH+R+ Sbjct: 242 EAALRMGMHSD-MIVTLSRLYARHATQVY--PLVPLPLPIALDSISHL-----LIWHQRH 293 Query: 299 SHNPKIVWLRETIKNLYAS 317 +P WLRET+ L S Sbjct: 294 EEDPGHRWLRETLLALIMS 312 >UniRef50_A3QJ07 Transcriptional regulator, LysR family n=25 Tax=Alteromonadales RepID=A3QJ07_SHELP Length = 330 Score = 161 bits (407), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 98/313 (31%), Positives = 163/313 (52%), Gaps = 13/313 (4%) Query: 4 SITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLS 63 ++ +DLNLL+ LQ+L++ERSVT+AA R++++ SA+SKSL +LR DPLF+ + GL Sbjct: 5 NLARIDLNLLVMLQVLLEERSVTRAASRLHLSQSALSKSLNRLRDTLGDPLFIRTAHGLK 64 Query: 64 PTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGLK-FELAAESPLMMIMLNALSKQIYQR 122 PT + Q L + +Q L P + F A ++ + Sbjct: 65 PTAHAALLGQQLPDMLQGLYQLTQPPSFNPASSRRQFSFAMVESAYETLIPYFIGPLLNN 124 Query: 123 YPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCV 182 P + W SL ++ +G++D G +GR+ +P+S ++ LP I ++ LF+D Sbjct: 125 APNLRLDSYLWTEKSLSSLQKGQIDFGITGRDINPQSDLIIDRLPEGIAHQTLFTDHQVC 184 Query: 183 WLRKDHPAL----HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEF 238 +R+ HP L + W+LD +L H+ + E ++ WALD L + G+ R ++ ++P+F Sbjct: 185 LVRQGHPMLPAIRNHQWDLDIYLEMSHVQVRCEGNEWWALDYFLAKSGQRRHLSTTVPDF 244 Query: 239 EQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRN 298 + + A D L+ + + +L+ L LPLPFD + + LLWH+RN Sbjct: 245 YGAASVCAHSD-LIFTLPSSFAAHARKLYALE--ELPLPFDFH-----SLAYVLLWHERN 296 Query: 299 SHNPKIVWLRETI 311 P W+RETI Sbjct: 297 DDEPGHKWIRETI 309 >UniRef50_B7VQ45 Transcriptional regulator n=8 Tax=Vibrionales RepID=B7VQ45_VIBSL Length = 311 Score = 145 bits (365), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 106/320 (33%), Positives = 151/320 (47%), Gaps = 29/320 (9%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 KS+ D+NLLLCL +L++ERSV+K A+R+ ++ SAVSK L KLRA FDDPLF GL Sbjct: 5 KSLLKCDMNLLLCLHVLIEERSVSKTAERLFLSQSAVSKQLTKLRALFDDPLFERESKGL 64 Query: 63 SPTPLMVSMEQNLAE-WMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQ 121 PTP +++ + + +Q+ L + P P+ +E + ++ IY Sbjct: 65 FPTPKALALAPKIHQILLQIEKLTV--PEVFDPKD------SERTFTIDLVETAYTAIYP 116 Query: 122 RY--------PQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYE 173 + P TI W DS + + EVD G E R+ + +P +DY Sbjct: 117 HFMPTALADAPHITINSSTWSSDSFKRLLKREVDFGIGIFELDERASTHVQCIPDELDYV 176 Query: 174 VLFSDVPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAM 233 L D +R DHPAL + WNL TFL+Y HI + + W L VL E A Sbjct: 177 ELCLDYSVCLMRNDHPALQEEWNLGTFLKYRHIQLVTGGAGDWLLMEVLNSKQLEINKAA 236 Query: 234 SLPEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVP--FT 291 ++ + ++ + Q D LL P Y + + LV P+P D VP Sbjct: 237 NVSDITSAIKLCKQSD--LLMCYP-YNSVRDYIDSGELVMKPVPVD-------LVPGGLF 286 Query: 292 LLWHKRNSHNPKIVWLRETI 311 LLWHK P WLR+ I Sbjct: 287 LLWHKYFDSEPSHKWLRDLI 306 >UniRef50_A8GZD3 Transcriptional regulator, LysR family n=22 Tax=Gammaproteobacteria RepID=A8GZD3_SHEPA Length = 335 Score = 139 bits (350), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 107/318 (33%), Positives = 166/318 (52%), Gaps = 29/318 (9%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 + LD NLL L++L++E+SVT AA R++++ SAVSK L+KLR FDD LF + GL Sbjct: 26 VKQLDFNLLRVLEVLLEEQSVTSAATRLHLSQSAVSKQLSKLRETFDDQLFERTAYGLKA 85 Query: 65 TPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPL---MMIMLNALS----- 116 TP + + L E +Q + Q R FE AES M I+ A S Sbjct: 86 TPRALQLAPELREVLQKLD--------QFTRPSTFE-PAESQRRFRMHIVETAYSLTYPY 136 Query: 117 --KQIYQRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEV 174 ++ ++ PQ +I W + S++ + R E+D+G RE RS +++LP + Sbjct: 137 FMPKLLKQAPQVSINGHTWSHSSMEQLLRCEIDMGIICREWDKRSLLHMNNLPEELGAAE 196 Query: 175 LFSDVPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMS 234 L D P LR+DHPAL + WN+DTFL+Y H+ + + + W LD+VL+ +R +A++ Sbjct: 197 LIRDYPVCLLRRDHPALKEPWNIDTFLKYRHLQVAFGGLEHWLLDDVLRLDHLQRDVAVN 256 Query: 235 LPEFEQSLFMAAQPDNLLLATAPRYCQYYNQLH-QLPLVALPLPFDESQQKKLEVPFTLL 293 + +F ++ + D L+ APR +Y Q+ LV L +P + L+ Sbjct: 257 MTDFNCAMDLCENSD--LILCAPR--KYIQQMMVNYDLVCLDVPVHVEPG-----AYVLV 307 Query: 294 WHKRNSHNPKIVWLRETI 311 WHK + +P WLR I Sbjct: 308 WHKHFNLDPSHSWLRNLI 325 >UniRef50_A6VUW1 Transcriptional regulator, LysR family n=2 Tax=Marinomonas RepID=A6VUW1_MARMS Length = 321 Score = 129 bits (325), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 86/313 (27%), Positives = 157/313 (50%), Gaps = 19/313 (6%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 ++ +DLNLL Q+L++E +VTKAA R+NV+ AVS+SL++LR F+DPLF+ + GLS Sbjct: 21 LSDIDLNLLYVFQVLIEELNVTKAATRLNVSQPAVSRSLSRLRDVFNDPLFIRTSHGLSA 80 Query: 65 TPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGLK--FELAAESPLMMIMLNALSKQIYQR 122 T + LA+ ++ L+ +P TP+ K F L+ + +L + + Q+ Sbjct: 81 TAKTQDLAPLLADTLKGLESLI-QPSEFTPQSSKRRFILSTTDFGTLTVLPKILDKFRQK 139 Query: 123 YPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCV 182 P A + +++W+ D + + + +D+ + P P I L SD Sbjct: 140 APDAILDVKSWNEDMVAELDQTNIDVAVAVLSKEP---------PAGIRAMRLKSDRMVC 190 Query: 183 WLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 RK+HP + L+++L+ H+ + + + +A+D L+++G +R +++ LP F + Sbjct: 191 LARKNHPRIEGKLTLESYLQVSHVQVVLGRREYFAVDRELEKMGHKRHVSVHLPNFVPAA 250 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 + D LL T P+ +V LPF E ++++WH+R H+ Sbjct: 251 RVVMDSD--LLLTVPKLFAEDMAATVSEIVVHELPFASR-----EFDYSMIWHERFQHDA 303 Query: 303 KIVWLRETIKNLY 315 VW R ++ + Sbjct: 304 AHVWFRGLLRQAF 316 >UniRef50_Q210Z5 Transcriptional regulator, LysR family n=2 Tax=Alphaproteobacteria RepID=Q210Z5_RHOPB Length = 301 Score = 118 bits (295), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 76/309 (24%), Positives = 141/309 (45%), Gaps = 25/309 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 LDLNLL+ L L+ E SV AA R+N++P A+S+ LA++R +DP+ V + GL TP Sbjct: 10 LDLNLLVTLDALLSEGSVAGAANRMNLSPPAMSRQLARIRHLMNDPVLVRAGRGLVATPR 69 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRGLK--FELAAESPLMMIMLNALSKQIYQRYPQ 125 ++ + + +Q + L+ P ++ F + + + A+ + + Q+ P Sbjct: 70 AEAVRAQVRQLVQDAEGLVRGNADLDPATIERTFTIRSSDGFVGTFGAAIVELVVQQAPN 129 Query: 126 ATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 A ++ + +D++ G VD+ ++ + I + LF D +R Sbjct: 130 ARLRFVGEGNEDVDSLRDGRVDLDIG----------VIDGMGPEIRLQTLFRDRYIGVVR 179 Query: 186 KDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMA 245 DHP +T ++ F+ YPH+S+ +D L G RT+++++ L + Sbjct: 180 ADHPLAQETVTIENFVAYPHVSVSRRGRFEGPVDTALALQGMRRTVSVAVANVADGLSIV 239 Query: 246 AQPDNLLLATAPRYCQYYNQLH--QLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 ++ D+++L Y H +LP+V LP P ++ WH R + Sbjct: 240 SRSDHIVLLPGRIAAWYRRDFHGFELPVVTDELP-----------PISIAWHPRFEKDAA 288 Query: 304 IVWLRETIK 312 WLR ++ Sbjct: 289 HRWLRTCVR 297 >UniRef50_A9FW21 Transcriptional regulator, LysR family n=2 Tax=Myxococcales RepID=A9FW21_SORC5 Length = 333 Score = 117 bits (293), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 88/307 (28%), Positives = 139/307 (45%), Gaps = 18/307 (5%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 I +++LNLL L+ L+ E SV+ AA+R +V+ SA+S SLA+LR F DPL V GL+P Sbjct: 22 IRSINLNLLPALEALLVEGSVSGAARRAHVSQSAMSHSLARLRELFGDPLLVPLGRGLTP 81 Query: 65 TPLMVSMEQNLAEWMQMSNLLLDKPHHQTPR--GLKFELAAESPLMMIMLNALSKQIYQR 122 TP + + L + L P PR F +A + L + + + Sbjct: 82 TPRALQLRAALPAAFEHLRRALASPEPFDPRTSARTFRVATIDYFELTTLPDVLDHLGEH 141 Query: 123 YPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCV 182 P +++ + D A+ G++D+ G S P L P L+ D V Sbjct: 142 APFVRLEIERFSPDVTPALVLGDIDLALFG-ASQPVPAAGLRRAP-------LYQDPFAV 193 Query: 183 WLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 RK HPA+ + +LDT++ H+ + E A+D L LG+ R +A+ LP F S Sbjct: 194 MARKGHPAIKRRLDLDTYVALGHVLVSVEGHRGGAVDRALARLGKTRRVALRLPHF-MSA 252 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 +A + +LL Q +L L + A P +Q +W +R+ +P Sbjct: 253 PLAVRSSDLLCTIPSSVAQRARELFGLRVFAPPFELPAAQ-------VVAVWSQRHDDDP 305 Query: 303 KIVWLRE 309 W R+ Sbjct: 306 AQRWFRD 312 >UniRef50_C3KKF8 Putative transcriptional regulatory protein, LysR-family n=1 Tax=Rhizobium sp. NGR234 RepID=C3KKF8_RHISN Length = 304 Score = 116 bits (290), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 96/322 (29%), Positives = 151/322 (46%), Gaps = 37/322 (11%) Query: 4 SITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLS 63 +I ++DLNLL+ L+ E T+AA+RI +T AVS +L +LRA F DPLFV SP G+ Sbjct: 5 NIASIDLNLLVVFDALVAEGHATRAAERIGLTQPAVSHALNRLRALFGDPLFVRSPRGMV 64 Query: 64 PTPLMVSMEQNLAEWMQMSNLLLD-----KPHHQTPRGLKFELAAESPLMMIMLNALSKQ 118 TP + + ++ ++L +P T +F L ++L L+ + Sbjct: 65 ATPAALDAAPAIRSILEQVEVVLSGGPAFEPEEST---RQFVLGLSDYAAFVLLPRLTAR 121 Query: 119 IYQRYPQATIKLRNWDYD-SLDAITRGEVDI---GFSGRESHPRSRELLSSLPLAIDYEV 174 + + P ++ +RN + L + G V++ F G SH R ELL YE Sbjct: 122 LEREAPNISLVIRNTSHGVGLPMLEEGSVELIAGNFPGPPSHMRE-ELL--------YE- 171 Query: 175 LFSDVPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMS 234 D C R DHPAL +LD +L H+ + + +D VL E G +R +A++ Sbjct: 172 --EDFVCAG-RGDHPALAYPLDLDRYLSLRHLQVSTRGNPHGYVDAVLAERGLKRKVAVT 228 Query: 235 LPEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLL- 293 + F + F+ D L+AT PR + +LPL P D PF ++ Sbjct: 229 VGHFLMAPFLVDSSD--LVATEPRRL-FEPMPSRLPLRFFAPPIDLP-------PFRVVQ 278 Query: 294 -WHKRNSHNPKIVWLRETIKNL 314 WH R+ +P WLR ++ + Sbjct: 279 AWHARHEADPGHQWLRRVLREI 300 >UniRef50_A9G5G2 Nodulation protein D n=2 Tax=Proteobacteria RepID=A9G5G2_SORC5 Length = 366 Score = 116 bits (290), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 78/311 (25%), Positives = 147/311 (47%), Gaps = 18/311 (5%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 + ++DLNL+ L L+ ER +T+A KR+ +T SA S +L +LR F DPLFV + GL+P Sbjct: 63 VASVDLNLVRVLGALLDERHLTRAGKRLGLTQSATSHALGRLRRLFGDPLFVRTSRGLAP 122 Query: 65 TPLMVSMEQNLAEWMQMSNLLL--DKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQR 122 T + + + E M+ + ++P F +A ++ L ++ + Sbjct: 123 TARAEELAEPVREAMRALDRCFRAEEPFVAASAARSFSVATADYGSFVLAPKLLDRLGRE 182 Query: 123 YPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCV 182 P + LR D + + RG+ D+ + P R+ LP I +L+ + Sbjct: 183 APNVDLWLRALDASFEEQLARGDADVVVA-----PARRD---GLPAGIHSRLLYRERFAC 234 Query: 183 WLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 +RK HP + + +L ++ H+ I + +D L +LG+ R +A+++P F + Sbjct: 235 LVRKGHPLVKKGIDLASWTSMRHVFIAPRGTPGGVVDETLAQLGKRRRVALAVPHFLLAP 294 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 + A D L++ R + + ++ L +V P+ + EV + WH+R+ +P Sbjct: 295 HVVAGSD-LVVTVGARVAEAFAEILPLRVVDPPV-----KLPGFEV--RMYWHERHHRDP 346 Query: 303 KIVWLRETIKN 313 W R+ ++ Sbjct: 347 AQQWFRDAVRG 357 >UniRef50_A3Y7F5 Transcriptional regulator n=1 Tax=Marinomonas sp. MED121 RepID=A3Y7F5_9GAMM Length = 339 Score = 115 bits (289), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 87/308 (28%), Positives = 149/308 (48%), Gaps = 32/308 (10%) Query: 21 QERSVTKAAKRINVTPSAVSKSLAKLR----AWFDDPLFVNSPLGLSPTPLMVSMEQNLA 76 +E SV++AA ++N++ SA+SK L KLR + DPLF+ + GL T +MEQ L Sbjct: 33 EEGSVSRAAYQLNLSQSAISKQLTKLREQVGSALKDPLFIKAGTGLKATAKAQAMEQPLR 92 Query: 77 EWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQIYQRYPQATIKLRNWD 134 EW+++ ++ P+H P+ +F+++ +++ + + Q P+ + + Sbjct: 93 EWLRLYCQMM-VPNHFDPQQDEREFKISIAENAFPVVVPGFMQSLTQAAPKLKLNIAKTH 151 Query: 135 YDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDY--EV----LFSDVPCVWLRKDH 188 SL + + ++D+ R++ +L + P I++ EV LF D +RK+H Sbjct: 152 SKSLQLVEQSQLDLLIIARDT-----DLRAGFPWHINHLPEVPRVTLFEDENVCLVRKNH 206 Query: 189 PALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQP 248 P L WNL++FL I I E+ W LD VL G+E + +F + +A Sbjct: 207 PVLTHPWNLESFLSLSRIKISVEEQTRWLLDEVLLAQGKESPDMAVVADFHSAALLAQHS 266 Query: 249 DNLLLAT---APRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIV 305 D ++ T A + C+ Y L LP+PF K + +LW + NP + Sbjct: 267 DMSMICTSAFANQLCERYE------LKMLPMPFHLGPAK-----YFMLWPETQETNPAHI 315 Query: 306 WLRETIKN 313 WLRE I+ Sbjct: 316 WLREFIQK 323 >UniRef50_Q1Z9L0 Putative transcriptional regulator, LysR family protein n=1 Tax=Photobacterium profundum 3TCK RepID=Q1Z9L0_PHOPR Length = 320 Score = 110 bits (275), Expect = 7e-23, Method: Compositional matrix adjust. Identities = 86/304 (28%), Positives = 144/304 (47%), Gaps = 24/304 (7%) Query: 21 QERSVTKAAKRINVTPSAVSKSLAKLR----AWFDDPLFVNSPLGLSPTPLMVSMEQNLA 76 +E SV+ A R+N+T SAVSK L +LR +DPLFV + GL PT V +EQ L Sbjct: 19 EEGSVSSVATRLNLTQSAVSKQLTRLREQLGGELNDPLFVRTGRGLEPTAQAVKLEQPLR 78 Query: 77 EWMQMSNLLLDKPHHQTPRGLK--FELAAESPLMMIMLNALSKQIYQRYPQATIKLRNWD 134 W+Q S + P P K F+++ +++ L ++++ P I + + Sbjct: 79 HWLQSSQKMF-VPDTFIPAEDKREFQISICETSFSVVVPLLLPKLHRLAPGMKINIVSKS 137 Query: 135 YDSLDAITRGEVDIGFSGRESHPRSR--ELLSSLPLAIDYEVLFSDVPCVWLRKDHPALH 192 DSL + G++D+ +++ R++ ++ L ++E L+ D LR +HP L Sbjct: 138 ADSLQRLREGQLDLLVIAKDTDQRAQISSQVTELKRQSNHE-LYQDHHVCLLRSEHPILE 196 Query: 193 QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQPDNLL 252 + W FL+ P I + E++ W LD V+ E G +P+F + + D +L Sbjct: 197 KKWGNAAFLQVPQIRVLVEENKFWLLDQVVAESGHCLDSKTIVPDFNSAALLVQHTDMML 256 Query: 253 LAT---APRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWLRE 309 + T A + + Y+ L LPLPF+ V + +LW + H+ +WLR Sbjct: 257 VCTSIFARKLAKSYS------LQQLPLPFNLK-----PVSYRMLWPETLEHDAAHLWLRG 305 Query: 310 TIKN 313 I Sbjct: 306 IISG 309 >UniRef50_UPI0001B54141 LysR family transcriptional regulator n=1 Tax=Streptomyces sp. C RepID=UPI0001B54141 Length = 298 Score = 109 bits (273), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 89/313 (28%), Positives = 143/313 (45%), Gaps = 38/313 (12%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +DLNLL L L+QE SVT+AA+R+ +P+AVS++LA+LR DPL V + GL PTP Sbjct: 1 MDLNLLRVLDALLQENSVTRAAERLGTSPAAVSRTLARLRRTVGDPLLVRAGQGLVPTPR 60 Query: 68 MVSMEQNLAEWMQMSNLLL------DKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQ 121 V + + + ++ + +L D H Q F + A L++ + +L+++I+ Sbjct: 61 AVELREEVGALIRGCDNVLRPGAGFDAVHLQR----TFTVQATDLLLVGLAGSLTERIHA 116 Query: 122 RYPQATIKLRNWDYDSLDAITRGEVDI--GFSGR-ESHPRSRELLSSLPLAIDYEVLFSD 178 PQ + + + +G VD+ G G + R+R L + Sbjct: 117 EAPQVDVVFLPEAVEGGPGLRQGLVDVELGVLGHLDPEIRTRRL--------------TR 162 Query: 179 VPCVWL-RKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPE 237 +P V + R HP + F HI I +D+ L ELG R A+ +P Sbjct: 163 MPLVGIARTGHPLFDGRIDARRFAAADHIGISRLGKRLGPIDSALAELGLRRRTAVVVPS 222 Query: 238 FEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLE-VPFTLLWHK 296 ++ +A D + L+ A + + + L A P+P D LE + + WH Sbjct: 223 HTSAMMLARDTDLVALSLAD---WIPDTIAAMGLRAFPVPLD------LEPLDLGMAWHP 273 Query: 297 RNSHNPKIVWLRE 309 RNS +P W RE Sbjct: 274 RNSADPGHRWFRE 286 >UniRef50_A1WMY5 Transcriptional regulator, LysR family n=1 Tax=Verminephrobacter eiseniae EF01-2 RepID=A1WMY5_VEREI Length = 304 Score = 109 bits (272), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 83/316 (26%), Positives = 148/316 (46%), Gaps = 31/316 (9%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +DLNLL+ Q L++ER+V++AA+R+ ++ SAVS +L +LR F D L V P G+ PTP Sbjct: 6 IDLNLLVTFQALVEERNVSRAAERLALSQSAVSHALKRLRNTFQDELLVRGPRGMEPTPR 65 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRGL--KFELAAESPLMMIMLNALSKQIYQRYPQ 125 V++ + + +D+ P + L+ + ++ + + + P Sbjct: 66 AVTLAIAVKSGLATIETAVDEKRSFDPATCHSTYYLSVTEYVRPFIMAHMCAYVREAAPH 125 Query: 126 ATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEV--LFSDVPCVW 183 + + D + + + + G + L+ LP+ E LF D V Sbjct: 126 VRLVFESPDEHQVGSA------VAYEGLQIR------LADLPVNGPMESMRLFDDTFAVA 173 Query: 184 LRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 +R++HP Q L+ +L+ HI + S A+D L R + + +P + ++L Sbjct: 174 MRREHPFAEQELTLEKYLQLAHIKVTGVGSS--AIDRALTARSLVRDVVVKMPNWLEALE 231 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLP--LVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 + D L+ P ++ +L +LP + PLP L++P WH RNS + Sbjct: 232 VVECTD--LVVAMP---NHWTRLGRLPRCCITRPLPL------ALQMPIDAAWHPRNSSD 280 Query: 302 PKIVWLRETIKNLYAS 317 P VWLRET++ +A+ Sbjct: 281 PAHVWLRETVRQAFAA 296 >UniRef50_A9CLK9 Transcriptional regulator, LysR family n=2 Tax=Alphaproteobacteria RepID=A9CLK9_AGRT5 Length = 325 Score = 109 bits (272), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 89/309 (28%), Positives = 139/309 (44%), Gaps = 24/309 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +DLNLL+ L ER+VT+A RI T A+S +L++LR D LFV P GL PTP Sbjct: 13 IDLNLLVAFDALNSERNVTRAGSRIGRTQPAMSAALSRLRFLLRDELFVRGPNGLQPTPR 72 Query: 68 MVSMEQ--NLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQ 125 V + + +LA L + + F +A + ++L L + ++ P Sbjct: 73 AVELAEPISLALREIQRTLQFTQGFDPDKSTISFSIAVSAHAGSVILPRLLSLLEEKAPG 132 Query: 126 ATIKLRNWDY--DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVW 183 IK+R++ D++ + G VD+ G P SR L + LF + Sbjct: 133 IDIKVRDYSSRDDAVSLLDSGGVDLTV-GIPPTPTSRILSAR---------LFQERFVCI 182 Query: 184 LRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 LRKDHP L + ++ +TFL HI + + D L R A+++P + Sbjct: 183 LRKDHPILGRPFDPETFLSLTHILVAPDNEGLDVADAALASKNFRRRAAVTIPHMHVAPA 242 Query: 244 MAAQPDNLLLATAPRYCQYYNQL-HQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 + A D ++AT ++ +L + PLP + VPF L WH+RN +P Sbjct: 243 LVASSD--MVATVIESVVAHSGFAERLAVFDFPLPLN-------PVPFVLSWHRRNDGHP 293 Query: 303 KIVWLRETI 311 WLR + Sbjct: 294 AQQWLRNGL 302 >UniRef50_A3YE73 Putative transcriptional regulator, LysR family protein n=2 Tax=Gammaproteobacteria RepID=A3YE73_9GAMM Length = 323 Score = 109 bits (272), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 88/318 (27%), Positives = 153/318 (48%), Gaps = 27/318 (8%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 ++ +++NLL+ LQ L++ERS + AA +N++ S++SK+LA+LR F+DPLF P GL P Sbjct: 6 LSRVNINLLVTLQSLLKERSASAAASSMNLSQSSISKNLAQLRHLFNDPLFHRGPHGLIP 65 Query: 65 TPLMVSMEQNLA-EWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRY 123 T L + +E L + NL + K +L+ +L + Q+ Sbjct: 66 TQLSLEIEPKLNLALFALDNLFAPDEFNLKEHRAKLKLSMPESAFEFLLAPMMTQLITAA 125 Query: 124 PQATIKLRNWDYD--SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPC 181 P ++L W D SLD + +G +D P+ L ++ + L+ D Sbjct: 126 P--YVQLDTWFKDTLSLDHLGKGLLDFVIL-----PQDLGQTPKLGNHLNTQELYRDELI 178 Query: 182 VWLRKDHPALHQ---TWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEF 238 +RK HP L W+ +T+L+ HI + + D L + G ER IA+ +P+F Sbjct: 179 CLVRKGHPVLTADKPNWDQETYLKCRHIHVRDNELGAPVFDQTLAQRGLERDIAIQVPDF 238 Query: 239 EQSLFMAAQPDNLLLATA---PRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWH 295 + + D + +A C+ Y+ LV+LP+P L V ++L+WH Sbjct: 239 NSASAICQHSDLIFTTSAHWGEHICKKYD------LVSLPMPC-----ATLPVVYSLIWH 287 Query: 296 KRNSHNPKIVWLRETIKN 313 +R+ +P +W ++ + N Sbjct: 288 QRSESDPAHLWFKQALIN 305 >UniRef50_Q473Q1 Transcriptional regulator, LysR family n=9 Tax=Burkholderiaceae RepID=Q473Q1_RALEJ Length = 315 Score = 108 bits (270), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 81/319 (25%), Positives = 143/319 (44%), Gaps = 23/319 (7%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 ++ +DLNL + + E S+T AA+++N+T AVS +L +LR FDDPLF G++P Sbjct: 6 LSRIDLNLFVVFDAIYSEGSITAAARQLNLTQPAVSHALGRLRGLFDDPLFERRGQGMAP 65 Query: 65 TPLMVSMEQNLAEWMQ-MSNLLLDKPHHQ-TPRGLKFELAAESPLMMIMLNALSKQIYQR 122 TPL S+ + +Q + L D PH T +F + L +L L ++ Sbjct: 66 TPLARSLASEVRSALQSFARTLQDTPHFDPTNTVRRFTIGMRDALESTLLPPLMARVTSV 125 Query: 123 YPQATIKLRNWDYDSLDA-ITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPC 181 PQ I +D +++ + G +D ++L + AI + +D Sbjct: 126 APQVEIAAIRFDRREMESELLAGTIDAAI----------DILLPVSPAIHHAQFMADPMI 175 Query: 182 VWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQS 241 V R+DHP + + L+ +L H+ + + D L +G R + + + + Sbjct: 176 VLARRDHPLVKKELTLERYLAAEHVHVSSRRRGAGLEDQALHRMGLTRRVRLRCQHYAAA 235 Query: 242 LFMAAQPDNLLLATAP-RYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 + + D LLAT P RY + N+ + +++LP K + L WH + Sbjct: 236 CRVVSCTD--LLATLPLRYARIANEPYANRILSLPF-------KVPSLELHLYWHAGGEN 286 Query: 301 NPKIVWLRETIKNLYASMA 319 + WLRE + + +S+ Sbjct: 287 DGANRWLREQLMAVMSSLG 305 >UniRef50_Q2S7V2 Transcriptional regulator n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2S7V2_HAHCH Length = 310 Score = 107 bits (268), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 89/316 (28%), Positives = 138/316 (43%), Gaps = 23/316 (7%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 I+ +DLNL + + E +T+A++ +++T AVS +L +LR D LF+ S G++P Sbjct: 3 ISRIDLNLFVVFDAIYSEGGITRASEVLHLTQPAVSHALNRLRETLGDELFIRSSRGMTP 62 Query: 65 TPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGLK--FELAAESPLMMIMLNALSKQIYQR 122 TP + + + + L + P L+ F L +++L AL K Sbjct: 63 TPYAHQLIGTVRQALNQLQRGLHQGQEFAPAQLETSFRLCVRDLFDVLLLPALIKNCRAI 122 Query: 123 YPQATIK-LRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPC 181 P+ LR+ L + G +D+ SH S I +E LF D Sbjct: 123 APKVVFNCLRSPREQILHDLASGRIDLAADVLISHDDS----------ICHEKLFEDRLT 172 Query: 182 VWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQS 241 LR+DHPAL W+L LR+PH+ + + D L G +R + + P F + Sbjct: 173 CLLRRDHPALASEWSLAEMLRWPHVQVSSREHGPGYEDIQLSRHGLQRKLGLRTPNFYGA 232 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQ-LPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 AA D L+ AP Q +L Q +PL +P P + LE L WH+ Sbjct: 233 ALTAANSD--LILCAPE--QVARKLTQTIPLQVMPFPLTLN---PLET--YLYWHRSTDR 283 Query: 301 NPKIVWLRETIKNLYA 316 P +WLRE + A Sbjct: 284 EPAHIWLREQTQRALA 299 >UniRef50_A9GLW1 Transcriptional regulator, LysR family n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9GLW1_SORC5 Length = 315 Score = 107 bits (266), Expect = 7e-22, Method: Compositional matrix adjust. Identities = 81/312 (25%), Positives = 146/312 (46%), Gaps = 20/312 (6%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 + ++DLNLL+ L L+ E SVT+AA R+ ++ SA+S +L +LR DDP+ V +P G+ P Sbjct: 18 LASIDLNLLVVLDALLAEGSVTRAAARVGLSQSAMSHALGRLRVLIDDPVLVRTPRGMIP 77 Query: 65 TPLMVSMEQNLAEWM-QMSNLLLDKPHHQTPRGLK-FELAAESPLMMIMLNALSKQIYQR 122 TP + + E + ++ + P + + F +A + +I+L L +++ Sbjct: 78 TPRAQELIGPIREALAKIEATVARSPRFEPATARRSFTVATVDYVELILLPRLVQKLVSE 137 Query: 123 YPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCV 182 P + R +D + A+ G+VD+ LL +LP + L + Sbjct: 138 APFIDLVARPYDSEMWSAMETGKVDLAIG----------LLPALPAGFYRQRLIEERYMC 187 Query: 183 WLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 +R+ HPA+ L T+ PH I +D VL E G R +A+ +P F + Sbjct: 188 VVRRSHPAVRGKLTLKTYTSLPHALISPRGEGGGRVDEVLAERGLSRRVALQIPHFLVAA 247 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 + AQ D L+L R + + ++ +L ++ P+ + +WH+R++ +P Sbjct: 248 HIVAQTD-LVLTVPARIARVFAEMEELHVMKPPVELGGFSVDQ-------VWHERHAKDP 299 Query: 303 KIVWLRETIKNL 314 WLR + Sbjct: 300 AHTWLRGVFAEI 311 >UniRef50_A9C385 Transcriptional regulator, LysR family n=2 Tax=cellular organisms RepID=A9C385_DELAS Length = 332 Score = 106 bits (265), Expect = 9e-22, Method: Compositional matrix adjust. Identities = 91/314 (28%), Positives = 144/314 (45%), Gaps = 21/314 (6%) Query: 4 SITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLS 63 ++ ++DLNLL+ + L++ERSV KAA R+ +T SAVS +L +LR F+DPL + + G+S Sbjct: 16 NLRSIDLNLLVIFEALVEERSVGKAAARLGITSSAVSHALRRLRTQFNDPLLLRTAEGMS 75 Query: 64 PTPLMVSMEQNLAEWMQ--MSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQ 121 PTP V + ++ + S + + K F L + +++L L I+ Sbjct: 76 PTPEAVRLARSFRKAFSEIESAIEVSKGFDPATARRNFHLRLSDYVGVLLLPQLC--IHL 133 Query: 122 RYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPC 181 R I L +D R E + G R S R R +LS+ L D Sbjct: 134 RAVAPGISLSVQSFDGRQPSDRVEYE-GVEIRLSVSRGRSVLSA------SRRLLDDQWM 186 Query: 182 VWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQS 241 V +RKDHPA L+ +L H+ + S +D +L E G R + +P + Sbjct: 187 VLMRKDHPAAASPLTLEKYLEQGHLKVTGVGSSI--VDELLAERGLARRVMFQVPTWLGM 244 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 + + D L+A P + ++ L VA P+P E L + +WH RN H+ Sbjct: 245 VPVIESTD--LVAAMPAHW-MHSVLSGSNCVARPMPLPE-----LALSIDAVWHPRNDHD 296 Query: 302 PKIVWLRETIKNLY 315 W RE I ++ Sbjct: 297 AGHKWFRELIHQIF 310 >UniRef50_B1LYW9 Transcriptional regulator, LysR family n=10 Tax=Rhizobiales RepID=B1LYW9_METRJ Length = 333 Score = 106 bits (264), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 85/301 (28%), Positives = 137/301 (45%), Gaps = 31/301 (10%) Query: 22 ERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSMEQNLAEWMQM 81 ERSVT+AA R+ + SA+S SLA+LR FDD L +P G+ PTP + + + L ++ Sbjct: 46 ERSVTRAAARVGIGQSAMSSSLARLRRLFDDELLTRAPDGMRPTPRALRIAEPLRSTLRQ 105 Query: 82 SNLLLDKPHHQTPRGLK--FELAAESPLMMIMLNALSKQIYQRYPQATIKLRNWD----Y 135 L+ + P + F ++ + ++ L Q+ + P + LR+ D Sbjct: 106 VQALVHREEQFDPATVARTFTVSLPDSVEALLGPRLIAQLRRDAPGIRLLLRSVDRTRIL 165 Query: 136 DSLDAITRGEVDIG-FSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPALHQT 194 D LDA R ++ IG FS + H + R +L+ D V L Sbjct: 166 DELDA-DRVDLAIGLFSEGQLHHKQR-------------LLYRDSYVVLFNAALIGLEPP 211 Query: 195 WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMA-AQPDNLLL 253 LD +LR+PH+ ++ +D+ L +GR RT+A++ P F FM A P ++ Sbjct: 212 IGLDDYLRFPHVLTSLRETAHGVVDDALALIGRSRTLAVTTPRFLVVPFMVRAAP--VIA 269 Query: 254 ATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWLRETIKN 313 R + L + +P+P D +V ++LWH H+P WLRE + Sbjct: 270 TMHARLATSFASALALSVSPVPVPLD-------DVSVSMLWHASYDHDPAHRWLRELLVR 322 Query: 314 L 314 L Sbjct: 323 L 323 >UniRef50_Q7W2A6 Transcriptional regulator n=3 Tax=Bordetella RepID=Q7W2A6_BORPA Length = 313 Score = 106 bits (264), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 90/318 (28%), Positives = 150/318 (47%), Gaps = 36/318 (11%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 LDLNLL+ ++ E VT+AA+R+ ++ SAVSK LA+LR F DPLF+ + G+ PT Sbjct: 6 LDLNLLMIFDAILAEGHVTRAAERLAMSQSAVSKGLAQLRQAFGDPLFLRASRGVVPTHR 65 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQIYQRYPQ 125 + + + + + N L R F + A + ++L L +++ + P Sbjct: 66 ALEIADQVRQAIAALNSLAGPVTEFDARSAHAHFNIGATDYVSFVLLPGLMRRLQETAPH 125 Query: 126 ATIKLRNWDYDSL---DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCV 182 ++ L D +S+ + + G+VD+ S ++S+ I + LF D Sbjct: 126 VSLTLH--DMESMMPEEMLLAGKVDLVISS----------VASVNFPIYRQELFRDHYVC 173 Query: 183 WLRKDHPALHQTWNLDTFLRYPHISICWEQ-SDTWALDNVLQELGRERTIAMSLPEFEQS 241 R HPAL ++ F+ H+++ + + L + LQ LG R +A+ +P Sbjct: 174 LCRAGHPALADPVPIEQFVSSRHLAMPRQNGARERVLQDTLQRLGVTRDVAVQVPH---- 229 Query: 242 LFMAAQPDNL----LLAT-APRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHK 296 M A P L L+AT A R + + H L ++A PLP + P + LWH Sbjct: 230 --MLAIPATLTATDLVATMACRVAREFAARHPLQVLAHPLPLP-------DFPVSQLWHD 280 Query: 297 RNSHNPKIVWLRETIKNL 314 R +P WLR+T+ +L Sbjct: 281 RTRRSPSHQWLRDTVYDL 298 >UniRef50_C5CVL6 Transcriptional regulator, LysR family n=5 Tax=cellular organisms RepID=C5CVL6_VARPS Length = 327 Score = 104 bits (260), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 89/323 (27%), Positives = 142/323 (43%), Gaps = 37/323 (11%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +DL+L+ L ++ +RSV++AA R+ + AVS +L +LR DPL V S G+ PT Sbjct: 10 IDLHLIRVLHTVLTDRSVSRAAIRLGMYQPAVSAALKRLRELSGDPLLVRSGSGMVPTDA 69 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPR--GLKFELAAESPLMMIMLNALSKQIYQRYPQ 125 + M + A ++ + +L P+ F +AA + + L L + + P Sbjct: 70 GLRMIEPAASILRAAEMLFSDARGFEPQSAATTFRIAASDYMDPLFLPMLVAHVKREAPL 129 Query: 126 ATIKLRNW--DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVW 183 I++ D D + G+VD+ P + LF D Sbjct: 130 CQIEIHALTPDSDYHGHLALGQVDLVIGNWLKPPEDLHMAR----------LFGDEVVSL 179 Query: 184 LRKDHPALHQTWNLDTFLRYPHIS-ICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 + +DHPA+ + W+L+T+L HI+ +D +L ELGR+R I F Sbjct: 180 VNQDHPAVRRGWDLETWLAAEHIAPTPMHPGGRGIIDQMLDELGRQRNITARCAHFSLIP 239 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTL-------LWH 295 M A L+L T +YC+ + +LP+ K LE P L LWH Sbjct: 240 DMVAS-SLLVLTTGRQYCERFAA--RLPV------------KILECPVALPRLMYYQLWH 284 Query: 296 KRNSHNPKIVWLRETIKNLYASM 318 +R + WLRE IK++ AS+ Sbjct: 285 ERTHSSSSARWLRECIKDVAASL 307 >UniRef50_A4Z170 Putative transcriptional regulatory protein, LysR-family n=1 Tax=Bradyrhizobium sp. ORS278 RepID=A4Z170_BRASO Length = 313 Score = 104 bits (259), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 90/321 (28%), Positives = 143/321 (44%), Gaps = 39/321 (12%) Query: 4 SITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLS 63 S+ +DLNLL+ + L+ ER+VT+AA R+ + + SK+L +LR F DPLF+ +P G+ Sbjct: 8 SLAHVDLNLLVLFEALLSERNVTRAAVRVGLAQPSASKALDRLRHLFGDPLFLRAPGGMR 67 Query: 64 PTPLMVSMEQNLAEWMQMSNLLL--DKPHH-QTPRGLKFELAAESPLMMIMLNALSKQIY 120 PTP + + +A ++ L+ + P T RG LA ++L L Q+ Sbjct: 68 PTPRALELAPEIALVLERVRALVAAELPFDPATARG-SLRLAMSDAAEFVLLPGLVAQLA 126 Query: 121 QRYPQATIKLRNWDYDSLDA-ITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 P T++ R D D + A + G +D + LP LF + Sbjct: 127 GTAPGVTLQARPLDKDRVFAELDEGRLDAVVG----------VFRELPKRFRSAPLFEER 176 Query: 180 PCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSL---- 235 R DHP L L+T++ PH+ + A+D+ L+ +G R +A +L Sbjct: 177 FVCLARADHPRLATGLTLETYVELPHLLVTLRDDRKGAVDDALEAIGLHRRVAATLTRFL 236 Query: 236 ---PEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTL 292 P S +A P A+AP C +LH+ PL ALP ++Q L Sbjct: 237 ALPPVLAFSDAIATVPSRFAAASAP-NC----RLHEPPL-ALP---RWTEQ--------L 279 Query: 293 LWHKRNSHNPKIVWLRETIKN 313 +W P I W + I++ Sbjct: 280 VWRAGAEREPMIAWGLQLIRS 300 >UniRef50_Q30XG7 Conserved hypothetical transcriptional regulator, LysR family n=1 Tax=Desulfovibrio desulfuricans subsp. desulfuricans str. G20 RepID=Q30XG7_DESDG Length = 309 Score = 103 bits (257), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 88/318 (27%), Positives = 142/318 (44%), Gaps = 22/318 (6%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 I++++LNLL+ L+ L+ E +VT+AA+R+++T S +SK+LA+LR FDDPL V S L Sbjct: 3 ISSVNLNLLVALKALLDEGNVTRAAERLHITQSGMSKNLAQLRELFDDPLLVRSGNALVL 62 Query: 65 TPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGLK-FELAAESPLMMIMLNALSKQIYQRY 123 T +E L + + L + + F LA + +L I Sbjct: 63 TERARELEGPLEMVLGNVHALFEAQRFDPATCRRSFTLAVTDYVAQYILPDALGAILAAA 122 Query: 124 PQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVW 183 P I+ W+ DS+ A+ G++D+ E P S E L + D Sbjct: 123 PGIDIQAIGWEPDSMRALAEGKIDMATCLTEGVPASVEQLR----------VGEDRFACL 172 Query: 184 LRKDHP-ALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 +R HP A LD +++ H +I +D VL +LG R I + +P + ++ Sbjct: 173 MRAGHPLAAAGAMRLDRYVQADHAAITIGGDKVRIIDRVLGKLGHSRNIRLRVPFYASAV 232 Query: 243 FMAAQPDNLLL--ATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 + ++ D LL A R + L PLPF ++++WH R Sbjct: 233 EIVSRTDLLLTLPAHVARNVIQARNPSEPALAWAPLPFAVDS-----FEYSIIWHARFHG 287 Query: 301 NPKIVWLRETIKNLYASM 318 +P W+RE L+A M Sbjct: 288 DPGHRWVREM---LFAQM 302 >UniRef50_A6UK78 Transcriptional regulator, LysR family n=2 Tax=Sinorhizobium RepID=A6UK78_SINMW Length = 310 Score = 103 bits (257), Expect = 8e-21, Method: Compositional matrix adjust. Identities = 82/300 (27%), Positives = 131/300 (43%), Gaps = 36/300 (12%) Query: 21 QERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSMEQNLAEWMQ 80 +ERSVT+AA R+ ++ A S++LA+LR F D + V+ P G T M +L + Sbjct: 28 EERSVTRAATRLGMSQPAASRALARLRVLFSDAILVDGPGGYLLTARAEEMRPSLRNTLA 87 Query: 81 MSNLLLDKPHHQTPRGLKFE-LAAESPLMMIMLN--------ALSKQIYQRYPQATIKLR 131 N LLD G F+ + A + ++ML+ L + ++ P +++ Sbjct: 88 GVNELLD--------GRTFDPMRATGAVRLLMLDLEAAVLAPRLISSLAEQAPAVDLQVV 139 Query: 132 NWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPAL 191 + L+A+ VD ++ P I L+ D +R DHPA Sbjct: 140 SPGLRPLEALEADAVDAVIG----------VVDEAPAGIRKRKLYQDGFVTLMRADHPAA 189 Query: 192 HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQPDNL 251 Q L FL H+ + + +D +L LGR+R + + +P F ++ +AA+ D Sbjct: 190 GQKLTLQRFLELDHVVVSITGTGPAWVDEILARLGRQRRVKVRVPSFFAAVEIAARSD-- 247 Query: 252 LLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWLRETI 311 L+ T P + + V P P D V +L WH RN P+ VWLR TI Sbjct: 248 LVITLPSSLARTADMRR--FVMTPPPLDLGS-----VVMSLAWHGRNQDAPRHVWLRRTI 300 >UniRef50_A4YPA1 Putative transcriptional regulator, LysR family n=1 Tax=Bradyrhizobium sp. ORS278 RepID=A4YPA1_BRASO Length = 310 Score = 103 bits (257), Expect = 9e-21, Method: Compositional matrix adjust. Identities = 85/321 (26%), Positives = 140/321 (43%), Gaps = 31/321 (9%) Query: 2 KKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLG 61 + + +DLNLL+ + LMQ RSV++ A+R+ + + S +L +LRA DPLFV +P G Sbjct: 6 RADLRDVDLNLLVAFEALMQTRSVSRMAQRLRIGQPSASHALKRLRALLGDPLFVRTPAG 65 Query: 62 LSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGLK--FELAAESPLMMIMLNALSKQI 119 + PTP +++ + + + L PR + F + A + ++ + L + Sbjct: 66 MIPTPHALALAEPIRAILTSIERTLFARASFDPRAERRVFRIGAMDYVQAVIADPLLAVL 125 Query: 120 YQRYPQATIKLRNWDYDSLD-AITRGEVDIGFSG-----RESHPRSRELLSSLPLAIDYE 173 + P + L D D+ ++ RGE+D+ SH +ELL YE Sbjct: 126 QAQAPGCKLILTTTDCDTAGRSLARGEIDLAIGAFPQIKAGSH---QELLYRE----RYE 178 Query: 174 VLFSDVPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAM 233 +F C R W L PH+ + + LD+VL+ G +R +A+ Sbjct: 179 CVFDAKAC---RLGKRVTRAQW-----LALPHVIMSVHGDYSGPLDDVLKSSGEQREVAV 230 Query: 234 SLPEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLL 293 S P F F+ + L+ A R + + +L L PLPF T++ Sbjct: 231 STPNFLAIPFL-LRNKRLIAALPSRMARAF--CGRLGLSTCPLPFTAPT-----FDVTMI 282 Query: 294 WHKRNSHNPKIVWLRETIKNL 314 WH R P WLR+ I + Sbjct: 283 WHARTGDEPGAAWLRDQITAI 303 >UniRef50_A4XX96 Transcriptional regulator, LysR family n=3 Tax=Proteobacteria RepID=A4XX96_PSEMY Length = 312 Score = 103 bits (256), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 88/319 (27%), Positives = 148/319 (46%), Gaps = 30/319 (9%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPT-- 65 LDLNLL+ L+ L+ E++VT+AA R++++ AVS L++LR F+DPL + + G++PT Sbjct: 6 LDLNLLVTLEALLIEQNVTRAAARLHLSQPAVSAQLSRLRDVFNDPLLIPAQRGMTPTVK 65 Query: 66 --PLMVSMEQNLAEWMQMSNLLLD-KPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQR 122 L+V + Q L + L+ +P + L +A + ++ L + + Sbjct: 66 ALELLVPLRQALDQVRATVTTHLNFEPATAS---LTVSIACTDYVQAALIKHLVVAMRRE 122 Query: 123 YPQATIKLRNWDYDSLD-AITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPC 181 P I LR D L+ +TRGEVD+ ++ P A+ + L+ + Sbjct: 123 APGVRIALRILDVPQLELQMTRGEVDLAVIN----------MNGAPPALHAQHLYDESYV 172 Query: 182 VWLRKDHPALHQTWNLDTFLRYPHISICWEQSD-TWALDNVLQELGRERTIAMSLPEFEQ 240 + R+ HP+LH +D F + H+ + + ++DN L G R + +S F Sbjct: 173 LIGRRGHPSLHAGLTVDEFAQLEHVVVSLRGGGFSTSVDNALVARGLRRNVVLSASSFLP 232 Query: 241 SLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 + AQ D +A PR + QL VA PLP + + WH+R+ Sbjct: 233 VPELVAQSD--CVALVPRRL-VEGRDEQLLCVAPPLPVE-------GFAIGMFWHERSDG 282 Query: 301 NPKIVWLRETIKNLYASMA 319 + W+RE I + S A Sbjct: 283 HAGFRWVREFITLVADSRA 301 >UniRef50_A6X639 Transcriptional regulator, LysR family n=1 Tax=Ochrobactrum anthropi ATCC 49188 RepID=A6X639_OCHA4 Length = 324 Score = 102 bits (254), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 93/335 (27%), Positives = 141/335 (42%), Gaps = 45/335 (13%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 SI +DLNL+ LM+ER+VTKA +R+N+T SAVS +L KLR D LFV P G+ Sbjct: 2 SSIHNIDLNLIRVFNALMEERNVTKAGERLNLTQSAVSHALGKLRYILSDELFVRGPQGM 61 Query: 63 SPTPLMVSMEQNL-AEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQ 121 PTP + Q L + +S L + F +A + + A+ +++ + Sbjct: 62 HPTPRAEELSQPLRSALADISAALSPVQFDPATADMSFVVATSDFYIGTLFPAVMERLEK 121 Query: 122 RYPQATIKLRNW-DYDSLDAITRGEVD--IGFSGRESHPRSRELLSSLPLAIDYEVLFSD 178 P + LR + D + ++ + RG + +G GR RE L S Sbjct: 122 EAPGIRLWLRLFNDLNLVEELDRGTLHLVVGAFGRIPSRFRRETLVS------------- 168 Query: 179 VPCVWL-RKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPE 237 V VW+ RKDHPA ++T YPHI + + ++ G ER S P Sbjct: 169 VDNVWIMRKDHPASSGPLTIETLGHYPHIDVLLSGRAAMEAAGMQEQEGLERAFVTSNPP 228 Query: 238 FEQ----------------SLFMAAQP---DNLLLATAPR-YCQYYNQLHQLPLVALPLP 277 F + SL +A P ++A PR + Y + L L P P Sbjct: 229 FLEGLLREVGLSRRIGATVSLILAVPPLVAATNMIALLPRSVAETYKDTYGLVLHEAPYP 288 Query: 278 FDESQQKKLEVPFTLLWHKRNSHNPKIVWLRETIK 312 +Q +L H +P + WLR ++ Sbjct: 289 LPATQ-------INMLSHNTFGAHPAVAWLRSVLR 316 >UniRef50_Q08NF6 Transcriptional Regulator, LysR family n=1 Tax=Stigmatella aurantiaca DW4/3-1 RepID=Q08NF6_STIAU Length = 322 Score = 102 bits (254), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 77/316 (24%), Positives = 141/316 (44%), Gaps = 21/316 (6%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 ++++D NLL+ L L+QE V +A+KR+ ++PSA S +LA+LR D L V + L Sbjct: 15 LSSIDTNLLVVLDALLQEGHVGRASKRVALSPSATSHALARLRELLGDELLVRAGRQLVL 74 Query: 65 TPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGLK--FELAAESPLMMIMLNALSKQIYQR 122 TP +++ + + M+ +L P L+ F + + ++L L + + Sbjct: 75 TPRAIALAPQVRQLMEQMERILRPAESFHPAKLEHTFRVLTTDHIEFVLLRPLDRFLTDE 134 Query: 123 YPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCV 182 P+ + R D+++ + G D+ F + + LP I + LF D Sbjct: 135 APRVILHNRPMVPDAVEELRGGRADLAFG----------VFTDLPDDISSQELFKDRFVT 184 Query: 183 WLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 +R+ HP L + L F H+ + + T +D +L E +R + +L F + Sbjct: 185 LVREGHPVLARPLTLKRFAELDHVLVAPRGTATSRMDLLLAERNLKRRVVRTLGSFLSAP 244 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 F AQ D+ + +A R L L ++ P+ + E T +WH+R +P Sbjct: 245 FFVAQSDHAVTLSA-RIADALAPLLGLRVLEPPIAY--------EYTLTQIWHRRWDADP 295 Query: 303 KIVWLRETIKNLYASM 318 WLR+ + + + Sbjct: 296 AHAWLRQLTARVASGL 311 >UniRef50_B9B1S8 Transcriptional regulator, LysR family n=1 Tax=Burkholderia multivorans CGD1 RepID=B9B1S8_9BURK Length = 319 Score = 102 bits (254), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 87/315 (27%), Positives = 145/315 (46%), Gaps = 34/315 (10%) Query: 4 SITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLS 63 S+ LDLNLL Q +++ERS+TKA +R+ ++ AVS SL +LR FDDPLFV + G+ Sbjct: 16 SVDHLDLNLLRVFQAIVEERSLTKAGERLALSQPAVSYSLGRLRTLFDDPLFVRTRAGMQ 75 Query: 64 PTPLMVSMEQNLAEWMQMSNLLLDKPHHQTP--RGLKFELAAESPLMMIMLNALSKQIYQ 121 PTP+ + + + + + M + L P F L+ M L A+ + + + Sbjct: 76 PTPVALELAGIVGKALDMVRVALRYAERFDPATSTRTFRLSLSDAGEMAYLPAICRALRE 135 Query: 122 RYPQATIKLRNWDYDSL-DAITRGEVDIGFSGR-ESHPRSRELLSSLPLAIDYEVLFSDV 179 R P+ T+ ++ +++ +A+ +D E PR+R +++LF + Sbjct: 136 RAPRVTLSVQPMPVEAIEEALRASRLDFAIGNLPELMPRTR-----------HQLLFEET 184 Query: 180 -PCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEF 238 C+ R+ T L+ F+R H+++ + ALD+ L+ G R +A+ +P F Sbjct: 185 YVCMTGRRRGLPSGTTLTLEQFVRAAHVNVKSVEHSHHALDDALRAQGVGRNVALEVPHF 244 Query: 239 EQSLFMAAQPDNL----LLATAP-RYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLL 293 A P L L AT P R Q N+ + L A P T+ Sbjct: 245 ------VALPGVLQVTDLYATLPKRLAQILNRDNAFRLYA-------LPVPLPPAPVTMH 291 Query: 294 WHKRNSHNPKIVWLR 308 WH+ + I W+R Sbjct: 292 WHEHFHEDEGITWMR 306 >UniRef50_A6VSJ2 Transcriptional regulator, LysR family n=28 Tax=Proteobacteria RepID=A6VSJ2_MARMS Length = 328 Score = 101 bits (252), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 87/308 (28%), Positives = 145/308 (47%), Gaps = 23/308 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +DLNLL+ L L+ E+ V++AA+R++ + A+S +LA LRA F+DPL V L T Sbjct: 26 IDLNLLVTLHALLVEKHVSRAAQRLHKSQPAISHALANLRAIFNDPLLVRRTGKLELTSR 85 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRGLK-FELAAESPLMMIMLNALSKQIYQRYPQA 126 + L E + L+++P ++ + + F LA ++L L + + R P Sbjct: 86 ANELLPTLTEALHQLGALIEQPTFESTQAKRVFRLAMSDYGSRVVLPGLIQILRSRAPGI 145 Query: 127 TIKLRNWDYDS-LDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 +++ S L + GE+D+ F G + P S EL + + + C Sbjct: 146 DLQVIQGSRTSMLTGVYDGEIDMAF-GVFNSPLSDELHT-------HTLFIEHFICA--- 194 Query: 186 KDHPALHQTWNLDT--FLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 D L +T +L+ +L PHI + + +++ ++N L G R IAM+LP + + Sbjct: 195 ADKNTLPKTGSLEKTQWLSRPHILVAMQTNESNEIENALHREGVSRRIAMTLPHWGVASH 254 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 M A D L+L A R + + L L P P D + F+++WH R + Sbjct: 255 MVANTD-LILTAARRSFDLFLEDSPLQLFTPPYPIDPFK-------FSMVWHSRRESDAG 306 Query: 304 IVWLRETI 311 WLR TI Sbjct: 307 HNWLRHTI 314 >UniRef50_A5WDE8 Transcriptional regulator, LysR family n=1 Tax=Psychrobacter sp. PRwf-1 RepID=A5WDE8_PSYWF Length = 302 Score = 101 bits (252), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 84/315 (26%), Positives = 143/315 (45%), Gaps = 29/315 (9%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +D+ LLL Q + Q+ +++KAA+++++ A S L KLR FDDPLFV + PT Sbjct: 4 IDVRLLLLFQAIYQQNTISKAAQKLDIGQPAASLGLNKLRQHFDDPLFVRVGNQMQPTQT 63 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQIYQRYPQ 125 ++ + +Q + D HH P+ +F ++ MI++ L K + Q P Sbjct: 64 AQNLFPLVNNALQHIRAVNDYTHHFEPKNSSRRFHISMTDISHMIIVPKLIKYLKQHAPH 123 Query: 126 ATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + + + D+ ++ GE+D+ + L + F V +R Sbjct: 124 TKLDISAINSDTPSRMSSGEIDLAIG----------YIPHLEAGFFQQTFFEQHYSVVVR 173 Query: 186 KDHPALHQ-TWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 +DHP L Q T L+ + + H + + + L++ L+ +R IA++LP + + Sbjct: 174 QDHPRLTQNTLTLEAYQQEQHADVISSGTGHYLLEDHLRRRHIKRHIAITLPTYLGVGLI 233 Query: 245 AAQPDNLLLATAP----RYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 Q D L+AT P + N+LH LP LPL + Q K+ WH+R Sbjct: 234 IQQTD--LVATLPDKLAKLLLQENRLHTLP---LPLDIPKYQVKQ-------HWHERMHA 281 Query: 301 NPKIVWLRETIKNLY 315 NP WLR+ L+ Sbjct: 282 NPDNQWLRQVCYALF 296 >UniRef50_A3RSL5 Transcriptional regulators, LysR family n=4 Tax=Ralstonia solanacearum RepID=A3RSL5_RALSO Length = 304 Score = 101 bits (251), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 97/322 (30%), Positives = 138/322 (42%), Gaps = 44/322 (13%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTP- 66 LDLNLL Q + Q R+VT AAKR N+T A+S +LA+LR F DPLFV SP G+ PTP Sbjct: 6 LDLNLLGVFQAIYQTRNVTLAAKRHNITQPAMSNALARLREVFADPLFVPSPYGMRPTPY 65 Query: 67 ---LMVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRY 123 L V +++ L E Q L + K +F + + L AL +++ Sbjct: 66 AQQLAVPIDRALREVEQ--ALAMSKGFDPASSDREFRMHLTDFAQVAFLPALLERLRALA 123 Query: 124 PQATIKLRNWDYDS-LDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCV 182 P+ I++ ++ L A+ G +D F GR S + + LF D V Sbjct: 124 PRVVIRVEALAEETILPALDEGRLDFAF-GRMSKAAGQ--------GVGRYTLFKDRYAV 174 Query: 183 WLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEF---- 238 +R HP + F IC S A+++VL ++G IA+ LP F Sbjct: 175 LMRAGHPLAGHALSRKDFAAAGQALIC--TSGHRAIEDVLVKMGAH--IALRLPSFLVVS 230 Query: 239 ---EQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPL-VALPLPFDESQQKKLEVPFTLLW 294 E S M P L C H L VA+P FD S L W Sbjct: 231 RIVETSDLMVIVPARL-----AEQCAATGLFHTAALPVAMP-AFDVS----------LFW 274 Query: 295 HKRNSHNPKIVWLRETIKNLYA 316 + S +P W+R ++ L+ Sbjct: 275 SESRSADPAHAWMRGQLQQLFG 296 >UniRef50_Q393U0 Transcriptional regulator, LysR family n=6 Tax=Burkholderiales RepID=Q393U0_BURS3 Length = 310 Score = 101 bits (251), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 82/320 (25%), Positives = 144/320 (45%), Gaps = 36/320 (11%) Query: 4 SITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLS 63 ++ ++DLNLL+ L L+ E+ VT+AA ++ ++ SA+S +L +LR D L + + G+ Sbjct: 2 NLRSVDLNLLVALDALLTEKHVTRAATKVGLSQSAMSSALGRLRILMRDELLIRNATGME 61 Query: 64 PTPLMVSMEQNLAEWMQMSNLLLDKPHHQTP--RGLKFELAAESPLMMIMLNALSKQIYQ 121 PTP + +E+ L + + + LL+ P F L L +++ L Q+ Q Sbjct: 62 PTPRALELEEPLRQLLHQAERLLESDGAFDPATTAGHFRLRMSDVLEYLLMPPLLAQLEQ 121 Query: 122 RYPQATIKLRNWD-YDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 P T+ + + ++ A+ ++D+ S H + + ++PL D V Sbjct: 122 EAPGVTLDVVHLSPGQTVTALEADDIDVAVSMDLEHAGA---VQAMPLFDDRMV------ 172 Query: 181 CVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPE--- 237 CV R DHP + LD FL PH+ + +D +D L + R R + +++P Sbjct: 173 CVMAR-DHPCAAEALTLDLFLSLPHLKVSISSTDGRYVDAKLAGMRRARNVVLNVPHWLV 231 Query: 238 ----FEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLL 293 S +A L A R+ LV LPF+ + +++ Sbjct: 232 VPHLLRHSSMVAVMSARL----AERFAAD-------GLVLKALPFESAG-----FHWSMY 275 Query: 294 WHKRNSHNPKIVWLRETIKN 313 WH+R+ P WLRE I+ Sbjct: 276 WHRRHDSVPAQAWLREKIRE 295 >UniRef50_A0LD88 Transcriptional regulator, LysR family n=1 Tax=Magnetococcus sp. MC-1 RepID=A0LD88_MAGSM Length = 312 Score = 101 bits (251), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 74/321 (23%), Positives = 141/321 (43%), Gaps = 23/321 (7%) Query: 1 MKKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPL 60 +K+ + DLNLL+ LM ER VT+A +R+ +T +A+S +L +LR FDDPLF+ + Sbjct: 5 VKEGLNKFDLNLLVAFDALMSERGVTRAGRRLGITQAAMSNTLRRLRTAFDDPLFIKTGA 64 Query: 61 GLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNALSKQI 119 + PTP + + + ++ ++ LD F + + ++ AL + Sbjct: 65 RMEPTPRAMELSGMIEAALKQVHVALDNDSFDPANSHYVFRVGMVDYTVPLVFPALLDHL 124 Query: 120 YQRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRS--RELLSSLPLAIDYEVLFS 177 + P +++ N + + GEVD+ S + PR ++ +P Sbjct: 125 EKYAPNCILEVVNTGDFEGEMLESGEVDLVLSRLDQAPRGLKSRVVGEIPFV-------- 176 Query: 178 DVPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPE 237 C++ R HP + + L+ +L+ H+ +D L+ + +ER + + L Sbjct: 177 ---CIY-RPGHPLIKEPMTLEQYLQARHVHYYPPMVKEGLVDLGLKAINQERNVVVRLDS 232 Query: 238 FEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKR 297 F + A+ D L A + + + L PLPF+ + F ++WH R Sbjct: 233 FGMVPTLVAETD---LIAAVTHTSAHVIAPAMGLKVQPLPFEAPPLQ-----FVMVWHDR 284 Query: 298 NSHNPKIVWLRETIKNLYASM 318 + + W RE + ++ S+ Sbjct: 285 SEESAPHQWFREQVLHMLISL 305 >UniRef50_Q4KHX1 Transcriptional regulator, LysR family n=1 Tax=Pseudomonas fluorescens Pf-5 RepID=Q4KHX1_PSEF5 Length = 308 Score = 101 bits (251), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 88/318 (27%), Positives = 153/318 (48%), Gaps = 27/318 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +DLNLL+ L L+ E+ VT+ A R++++ A+S SL+KLR DDP+ + L + L Sbjct: 9 IDLNLLVVLDALLTEKHVTRTALRLHLSQPAISHSLSKLRGLLDDPILIRRGSELVLSSL 68 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRGLK--FELAAESPLMMIMLNALSKQIYQRYPQ 125 +++Q L E + L K P + F LA ++L L ++ + P Sbjct: 69 AQNIQQPLREILGQIETLFGKSIDFDPASSQRIFTLAMSDYGAALVLPNLMVRLRRDAPN 128 Query: 126 ATIKL-RNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV-PCVW 183 T+ + ++ + + +++G++D+ + +L I EVLF + C+ Sbjct: 129 TTLVVTQDTRHGMFEQVSQGKIDLALG----------VFPNLSGDISTEVLFEETFSCLL 178 Query: 184 LRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 R+ PA T +LD++L PHI + + S +D++L++ G +R IA+S+P + + Sbjct: 179 DRRTLPA-DGTLDLDSYLARPHILVSMDGSANGEVDSLLRDEGLQRRIAVSVPHWRTAPS 237 Query: 244 MAAQPDNLLLATAPRYCQ--YYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 M D L+L A R NQ L+ L P +++ WH+R + Sbjct: 238 MIHNTD-LILTVATRTLDEALLNQ----DLIQLRPPLPIPPFPFVQI-----WHQRFDNE 287 Query: 302 PKIVWLRETIKNLYASMA 319 P VWLRE +K + A A Sbjct: 288 PAHVWLREQVKQVVAHSA 305 >UniRef50_Q12M05 Transcriptional regulator n=3 Tax=Gammaproteobacteria RepID=Q12M05_SHEDO Length = 309 Score = 99.8 bits (247), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 78/317 (24%), Positives = 147/317 (46%), Gaps = 23/317 (7%) Query: 1 MKKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPL 60 M ++ LDLNLL+ +M+E+S++ AA+++ +T +VS ++A++R + DPLF+ Sbjct: 1 MSAGMSKLDLNLLVIFDAIMKEQSISAAAEQLAMTQPSVSNAVARMRHNWKDPLFIKQGR 60 Query: 61 GLSPTPLMVSMEQNLAEWM-QMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQI 119 G+ P+P +++ Q +A + Q+ + + K + F +A + AL + + Sbjct: 61 GIKPSPFALALWQQVASPLEQIRSAVSSKTFNAAHSERTFRIAITDGTSGLFWPALRRHL 120 Query: 120 YQRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRES-HPRSRELLSSLPLAIDYEVLFSD 178 + P+ + + D + EVD+ E+ HP ++LS + LF + Sbjct: 121 ERHAPKINLHAVPYKLDGEALLVNAEVDLVLDYYENRHP---QILS--------QHLFDN 169 Query: 179 VPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEF 238 + K H +T LD F H+ + + +D L +LG R IAM++ F Sbjct: 170 QFVCVMAKAHALSEKTLTLDDFAAAEHLLVSLSGDASGTVDRKLAQLGHSRRIAMTVNSF 229 Query: 239 EQSLFMAAQPDNLLLATAP-RYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKR 297 + + ++ L++T P + L +L + LP VP ++ WH R Sbjct: 230 ASAKTLI--EESRLISTLPYSIIASWQSLDKLTVKTLPFTVP-------SVPISMAWHSR 280 Query: 298 NSHNPKIVWLRETIKNL 314 N + + WLRE I ++ Sbjct: 281 NDASISLRWLREAIVDI 297 >UniRef50_A9BZQ9 Transcriptional regulator, LysR family n=1 Tax=Delftia acidovorans SPH-1 RepID=A9BZQ9_DELAS Length = 323 Score = 99.8 bits (247), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 81/315 (25%), Positives = 140/315 (44%), Gaps = 27/315 (8%) Query: 7 TLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTP 66 T DLNLL+ L L+ SVT+AA R++++ A+S +LA++R F DP+ V + L PTP Sbjct: 4 TYDLNLLIALDALLSTGSVTQAAGRMHLSTPAMSHTLARIREAFGDPILVRAGRSLVPTP 63 Query: 67 LMVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESP--LMMIMLNALSKQIYQRYP 124 +++ + + + + L D GL+ +P + ++ +LS+ + P Sbjct: 64 RALALAEPVRALLAQARALQDPVDAGGLAGLRRRFVVRAPEGIAVVFGASLSRALEAEMP 123 Query: 125 QATIKLRNWDYDSLDAITRGEVDIGFSG-RESHPRSRELLSSLPLAIDYEVLFSDVPCVW 183 A+++ + A+ G +D+ R P + L+ I + L V Sbjct: 124 LASLQFLPETHADPGALREGRIDLDVGSFRSMDPETESLV------ISEQTLVGVV---- 173 Query: 184 LRKDHPALH-----QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEF 238 R HP L Q + F H+ I ++ +D L+ LG +R +A+ +P Sbjct: 174 -RAGHPLLKSARKSQRPSAAQFAAARHVGITQRPGESSPVDAALEALGLQRQLALLVPSS 232 Query: 239 EQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRN 298 +L A++ D L+A P + L LV LP + Q P + WH R+ Sbjct: 233 FSALIAASRTD--LVACVPTRT-AHGMAASLGLVVFALPIEVQVQ-----PMRMAWHPRH 284 Query: 299 SHNPKIVWLRETIKN 313 +P WLR+ I+ Sbjct: 285 QADPAHQWLRDCIQR 299 >UniRef50_B7CP85 Transcriptional regulator, LysR family protein n=1 Tax=Burkholderia pseudomallei 576 RepID=B7CP85_BURPS Length = 305 Score = 99.4 bits (246), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 79/312 (25%), Positives = 136/312 (43%), Gaps = 22/312 (7%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 K I DLNLLL +L++ER V+KAA R +++ A+S+ L +LR F D L V + G Sbjct: 4 KHIRGADLNLLLAAFVLLEERQVSKAADRYHLSQPAMSRMLQRLRDTFGDELLVRTRGGF 63 Query: 63 SPTPLMVSMEQNLAEWM-QMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQ 121 PT + L E + ++ LL T F +A I+ L +++++ Sbjct: 64 EPTVRGRYILHELGELLPRLDALLRGGLFDPTEAEDTFRVACTDYATTILGPRLFERVFR 123 Query: 122 RYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPC 181 P ++ + W + +AI G +D+ E +P + E LF D Sbjct: 124 EAPNVSMDVVAWHDHAFEAIEHGRLDLVLWPNE-----------VPDTLYSETLFEDDFV 172 Query: 182 VWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQS 241 + DHP+ L +LR+PH + ++ L ++G R + + F + Sbjct: 173 CMMSSDHPSGDGPLVLRDYLRFPHAVVSVLGGKQTIVEQRLHDMGVRRAAGLRVSYFSGA 232 Query: 242 LFMAAQPDNLLLATAP-RYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 + A+ L+AT P R Y + +V P F ++ + ++WH R Sbjct: 233 ITAIAR--TALIATVPRRLAMLYRDRANIRIVEAPAMFG-------KLSYKMVWHPRADG 283 Query: 301 NPKIVWLRETIK 312 + + WLR+TI+ Sbjct: 284 DLALQWLRQTIR 295 >UniRef50_C6BS61 Transcriptional regulator, LysR family n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6BS61_DESAD Length = 310 Score = 99.4 bits (246), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 91/323 (28%), Positives = 149/323 (46%), Gaps = 27/323 (8%) Query: 2 KKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLG 61 K + + LDLNLL+ L + ERS+T A ++ +T SAVS +L+KLR FDD LFV Sbjct: 3 KTNSSNLDLNLLVILDTIFTERSLTLAGNKLFMTQSAVSHALSKLRHHFDDRLFVRRGNI 62 Query: 62 LSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGLK--FELAAESPLMMIMLNALSKQI 119 + PTPL ++ QN+A ++ N L P K F L L ++L + + I Sbjct: 63 MEPTPLCKTIHQNIAPSLKAINQSLADRGEFDPASSKRTFSLGLSDYLCKLLLPEILRLI 122 Query: 120 YQRYPQATIKLRNWDYDSLDAITR-GEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSD 178 R +I++ Y+ + + + G++D+ F G PR + + E LF D Sbjct: 123 DSRALGISIRIMQTTYEKREEMLQSGKLDV-FLG---CPR------NYGAGVLKEKLFED 172 Query: 179 VPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEF 238 +R DHP + N + ++ +S L++ L G +R I + L + Sbjct: 173 REVCVVRNDHPIKGEVMNEEEMAENEFAALSLSESGLGFLEDYLYRKGVQRKIKIVLQQ- 231 Query: 239 EQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPL---PFDESQQKKLEVPFTLLWH 295 E + + NL+ + A R + Y +L +V +PL F+ SQ WH Sbjct: 232 ETVIPSLVENSNLVGSIAQRLAEMYAAKGRLRIVHMPLENTEFEVSQH----------WH 281 Query: 296 KRNSHNPKIVWLRETIKNLYASM 318 N ++P W+R IK + A++ Sbjct: 282 SLNDNDPAQQWIRSVIKEVAATL 304 >UniRef50_Q13YH7 Transcriptional regulator, LysR family n=12 Tax=cellular organisms RepID=Q13YH7_BURXL Length = 317 Score = 99.0 bits (245), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 84/323 (26%), Positives = 146/323 (45%), Gaps = 38/323 (11%) Query: 4 SITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLS 63 S+ +DLNLL Q +++ERS+T+A +R+ ++ A+S SL +LR FDDPLF+ + G+ Sbjct: 14 SLDQVDLNLLRVFQAIVEERSLTRAGERLALSQPAISYSLGRLRTLFDDPLFIRTRAGMQ 73 Query: 64 PTPLMVSMEQNLAEWMQMSNLLLDKPHHQTP----RGLKFELAAESPLMMIMLNALSKQI 119 PTP+ + + +A + L H P R + L+ L L + + + Sbjct: 74 PTPIALELSAIVARALDTVREALRYAEHFDPAVSTRTFRVSLSDAGELA--YLPPICEAL 131 Query: 120 YQRYPQATIKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSD 178 +Q+ P+ +++ + + DA+ +D L +L ++ LF + Sbjct: 132 HQQAPRVRLRIEPLPVEEIEDALRASRLDFAIGN----------LPTLTARTRHQALFEE 181 Query: 179 V-PCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPE 237 C+ ++ + +L FL H+ I + ALD+ + G R IA+ LP Sbjct: 182 TYVCMTRKRRGLPRAKELSLKAFLDASHVQITSVEHSHRALDDEFRTQGVGRHIALELPH 241 Query: 238 FEQSLFMAAQPDNLLLATAP-RYCQYYN-----QLHQLPLVALPLPFDESQQKKLEVPFT 291 F + A D L AT P R Q +N Q+++LP V LP+ T Sbjct: 242 FVALPSVLAVTD--LFATLPRRLAQIFNRGGNFQIYELP-VTLPI-----------AAVT 287 Query: 292 LLWHKRNSHNPKIVWLRETIKNL 314 + WH+ + VWLR + ++ Sbjct: 288 MHWHEHFDQDEGNVWLRNLMADI 310 >UniRef50_Q7MCZ8 Transcriptional regulator n=13 Tax=Vibrionaceae RepID=Q7MCZ8_VIBVY Length = 313 Score = 98.6 bits (244), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 81/302 (26%), Positives = 141/302 (46%), Gaps = 26/302 (8%) Query: 21 QERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSMEQNLAEWMQ 80 +E V++AA R+++T SA+S+ LA+LR DPL V L TP ++ L + + Sbjct: 18 EECHVSRAADRLHITQSAMSRQLAQLRELCSDPLLVREGNRLVATPHAEALRPKLVQLLS 77 Query: 81 MSNLLLDKPHHQT--PRGLKFELAAESP--LMMIMLNALSKQIYQRYPQATIKLRNWDYD 136 L D HQ P+ + +L S + ++ LS+ + ++ P+ T+ R W Sbjct: 78 EFEHLFD---HQAFNPQDWQGQLVLSSSDYVAQFIVPTLSRVLIEQAPRLTLSYRLWQPQ 134 Query: 137 SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHP-ALHQTW 195 LD++ +D G + +L S P + Y + D +R+ HP + Sbjct: 135 YLDSL----LDTGIH------LASTMLPSPPKELSYTKIGEDYSVCVMRQGHPLSGKAAL 184 Query: 196 NLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQPDNLLLAT 255 +L+ LRY HI + A D+VL++LG+ R IA+ +P F ++ + Q D +++ Sbjct: 185 SLEDMLRYSHIKVTGGGDKDSATDSVLRKLGKTRHIALQVPFFSAAVNVLIQSDYMMV-- 242 Query: 256 APRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWLRETIKNLY 315 P + N P+ PLPFD + + L+WH + H+ W+RE + + Sbjct: 243 VPEHIA-VNLAKSQPICHYPLPFDTEIHQ-----YWLMWHPKYDHDSAHRWVREKVTRVM 296 Query: 316 AS 317 S Sbjct: 297 LS 298 >UniRef50_A9GGP1 LysR-family transcriptional regulator n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9GGP1_SORC5 Length = 312 Score = 98.6 bits (244), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 83/321 (25%), Positives = 146/321 (45%), Gaps = 35/321 (10%) Query: 4 SITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLF--VNSPLG 61 +++ +D+NL++ L L+QERSVT AA+R+ ++ A+S +L +LR F DPL V + Sbjct: 2 NLSAIDVNLVIALDALLQERSVTLAARRVGLSQPAMSHALTRLRELFSDPLLIRVGRQMA 61 Query: 62 LSP-----TPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALS 116 L+ TP + ++ +LA + D F +AA + ++++ L+ Sbjct: 62 LTSRAEAMTPQVTAIVHDLAGLFGETTPTFDPATSDR----AFRIAATEYVELVLMPRLN 117 Query: 117 KQIYQRYPQATIKLRNWDYDSLDAITRGEVD--IGFSGRESHPRSRELLSSLPLAIDYEV 174 + Q P+ + L D ++DA+ GE+D IG +E SLP + Sbjct: 118 AALAQGGPRLALHLLPLDGRAVDALRSGEIDLAIGVFPQE----------SLPPDLRRAP 167 Query: 175 LFSDVPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMS 234 LF D R HP +L T+ PH+ + + D+++ G R AM+ Sbjct: 168 LFDDRFAGLARMSHPTARGQVDLQTYAALPHVVVPRRGAHDGVADDLIAARGIARHEAMT 227 Query: 235 LPEFEQSLFM--AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTL 292 +P L + A +L+ A R + ++ L +PL LPF + +E+ + Sbjct: 228 VPHV---LLVPHAITASDLVATVATRLGRAFSSL--VPLRTFDLPF---ELPPIEI--AM 277 Query: 293 LWHKRNSHNPKIVWLRETIKN 313 W+ R +P WLR + + Sbjct: 278 AWNSRTERDPARAWLRGVVTD 298 >UniRef50_P52698 HTH-type transcriptional regulator phcA n=16 Tax=Burkholderiaceae RepID=PHCA_RALSO Length = 347 Score = 98.6 bits (244), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 90/333 (27%), Positives = 146/333 (43%), Gaps = 48/333 (14%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 + +D LL+ L+ +R+ T A+++++T AVS SL +LR FDDPLF+ P GL+P Sbjct: 1 MVNVDTKLLVIFVELLSKRNATYVAEKMHMTAPAVSHSLGRLREIFDDPLFIRVPHGLTP 60 Query: 65 TPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRY- 123 TP + + + E + + + ++ L A + L ++ R+ Sbjct: 61 TPKALELGPKVREMLDLWAAI-----NEGDIATFDPLEAAGTFNISFAGTLGDALFDRFL 115 Query: 124 -------PQATIKL---RNWDYDSLDAITRGEVDIGFSGRES-HPRSRELLSSLPLAIDY 172 P ++L +W+ D + A+ E+D+ FS + HP E Sbjct: 116 LRVKRLAPGLQVRLTESSSWEAD-VAAMRSNELDLAFSPFPTRHPEIVE----------- 163 Query: 173 EVLFSDVPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWA------LDNVLQELG 226 EV+ S V RKDHP L +LD +L HI I T A LD LQ+ G Sbjct: 164 EVVTSFNMWVCARKDHPVLKDHCSLDQYLECEHIFIAQGNPGTRAAPSLIPLDYALQQRG 223 Query: 227 RERTIAMSLPEFEQSLFMAAQPDNLLLATA---PRYCQYYNQLHQLPLVALPLPFDESQQ 283 +R M++ + +AAQ D + + C+ YN L A PLP + Sbjct: 224 LKRHSTMTVHAWRTQAEVAAQTDMIFTVNSLMKDLVCETYN------LNAFPLP----SE 273 Query: 284 KKLEVPFTLLWHKRNSHNPKIVWLRETIKNLYA 316 + + +LWH+ + +P +VW R K + A Sbjct: 274 LETVLGLNMLWHRSRNTHPMLVWARNLFKQVVA 306 >UniRef50_A0LD87 Transcriptional regulator, LysR family n=1 Tax=Magnetococcus sp. MC-1 RepID=A0LD87_MAGSM Length = 322 Score = 98.6 bits (244), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 89/328 (27%), Positives = 139/328 (42%), Gaps = 47/328 (14%) Query: 1 MKKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPL 60 MK ++ DLNLL+ LM ER VT+A + + +T +A+S +L +LR FDDPLFV + Sbjct: 6 MKHNLNKFDLNLLVAFDTLMTERGVTRAGRALGITQAAMSNTLRRLRELFDDPLFVKTGS 65 Query: 61 GLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAES-PLMMI------MLN 113 + PTP + + +A ++ L++ G +A+E+ L MI ++ Sbjct: 66 SMEPTPRAIELSTPVALALEEVRKALNQ------EGFDPMMASENFRLGMIDYASAMLMP 119 Query: 114 ALSKQIYQRYPQATIKLRNWDYDSLDA-ITRGEVDIGFSGRESHPRSRELLSSLPLAIDY 172 L + + Q P+A +++ + D A + RG VD+ FS +P + Sbjct: 120 GLVRHMSQVAPRAKMQVVDVGGDEEVANLERGAVDLVFS----------RFQWVPPKVCI 169 Query: 173 EVLFSDVPCVWLRKDHPALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTI 231 LFS +HP + + ++D FL H+ D +D L E+G +R I Sbjct: 170 NRLFSMEYVAVFCPNHPGVEGGSLSMDAFLASRHVHYYPRGMDNTVVDETLAEMGEKRNI 229 Query: 232 AMSLPEF-------EQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQK 284 L F S MA P+ A L L LPF K Sbjct: 230 IGKLASFGMLPAMLASSHVMAVMPEGAAKVVA----------RPLGLRVEKLPF-----K 274 Query: 285 KLEVPFTLLWHKRNSHNPKIVWLRETIK 312 + L WH R +P VW R+ +K Sbjct: 275 TPLLRMALAWHPRTDRDPSHVWFRQQVK 302 >UniRef50_B9Z7Z3 Transcriptional regulator, LysR family n=3 Tax=Proteobacteria RepID=B9Z7Z3_9NEIS Length = 324 Score = 98.6 bits (244), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 82/320 (25%), Positives = 140/320 (43%), Gaps = 31/320 (9%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 ++T D NLL+ L +L+ E SV +AA+R+ ++PSA+S++LA+LR DPL V + GL P Sbjct: 1 MSTPDFNLLVTLDVLLAEGSVARAARRLRLSPSAMSRALARLRETTGDPLLVRAGRGLVP 60 Query: 65 TPLMVSMEQNLAEWMQMSNLLLDKPHHQ---TPRGLKFELAAESPLMMIMLNALSKQIYQ 121 TP + + + +++ +Q + +L +P + T F L + +L ++ + Sbjct: 61 TPRALELREQVSQLVQDAAAVL-RPAEKLDLTQLVRTFTLRVGDGFVENFGPSLIARVGE 119 Query: 122 RYPQATIKLRNWDYDSLDAITRGEVDI--GFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 P ++ + G VD+ G G + P R LF D Sbjct: 120 AAPGVRLRFMPKSNKDTAPLRDGSVDLDTGVVGEGTGPEVR-----------VRALFQDR 168 Query: 180 PCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFE 239 +R+ HP + H+ + +D +D L+ +G ER I + F Sbjct: 169 FIGVVRQGHPLCQGEITPARYAAGRHVLVSRRGTDKGPVDETLRAIGLEREIMTIVGGFA 228 Query: 240 QSLFMAAQPDNLLLATAPR--YCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKR 297 +L +A D L+AT P + +H ALP P E+ +LLWH R Sbjct: 229 PALALARATD--LVATVPERHTGTLRDGMHSF---ALPFPAP-------EITVSLLWHPR 276 Query: 298 NSHNPKIVWLRETIKNLYAS 317 + WLR ++ + A+ Sbjct: 277 MDADLAHRWLRGCVREICAA 296 >UniRef50_C7RKX8 Transcriptional regulator, LysR family n=20 Tax=Proteobacteria RepID=C7RKX8_9PROT Length = 310 Score = 98.2 bits (243), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 86/326 (26%), Positives = 140/326 (42%), Gaps = 49/326 (15%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 ++T DLNLL+ L +L+ E SV +AA+R+ ++PSA+S++LA+LRA DPL V + GL P Sbjct: 1 MSTADLNLLVTLDVLLAEGSVARAAQRLRLSPSAMSRALARLRATTGDPLLVRAGRGLVP 60 Query: 65 TPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNA---------- 114 TP + + + + +Q + L +P K +L E + M L Sbjct: 61 TPRALELREQVGPLVQAAEAAL-RPVE------KLDL--ERLVRMYTLRTSEGFVENFGP 111 Query: 115 -LSKQIYQRYPQATIKLRNWDYDSLDAITRGEVDI--GFSGRESHPRSRELLSSLPLAID 171 L ++ ++ P + + + G VD+ G G+ + P R Sbjct: 112 DLIARVAEQAPGVRLCFVQKSNKNSAPLRDGSVDLETGVVGKATAPELR----------- 160 Query: 172 YEVLFSDVPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTI 231 + LF D +R HP + HI + D +D L+ LG ER I Sbjct: 161 VQALFRDRFIGVVRMGHPLSQGEMTPHRYATGKHILVSRRGFDRGMIDEALKPLGLERQI 220 Query: 232 AMSLPEFEQSLFMAAQPDNLLLATAPR--YCQYYNQLHQLPL-VALPLPFDESQQKKLEV 288 + F +L +A D L+A+ P + +H PL +A P E+ Sbjct: 221 VTIVSGFSTALVLARASD--LIASVPERHTAKLRAGMHSFPLPIATP-----------EI 267 Query: 289 PFTLLWHKRNSHNPKIVWLRETIKNL 314 +L WH R +P WLR ++ + Sbjct: 268 TVSLHWHPRMDADPAHRWLRGCVREV 293 >UniRef50_Q15UP0 Transcriptional regulator, LysR family n=4 Tax=Alteromonadales RepID=Q15UP0_PSEA6 Length = 305 Score = 97.4 bits (241), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 87/318 (27%), Positives = 142/318 (44%), Gaps = 32/318 (10%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +DLNL + S+TKAA + +T AVS SLA+LR +DPLFV + ++PTP Sbjct: 6 IDLNLFAVFDAIYTAGSLTKAADVLCITQPAVSNSLARLREMLNDPLFVRTGHSMTPTPA 65 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQIYQRYPQ 125 ++ E + + + + H P + + AA L ++ L+ Q+ P Sbjct: 66 AQNIIGPAREALGLLRKSVQESHTFDPATAEISYNFAARDLLEASIMPRLTAQLQNVAPN 125 Query: 126 ATIKLRNWDY---DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCV 182 I L N+D + + A+ G +D F S L +A D V+ + Sbjct: 126 --ITLTNYDISRSNIVSAMASGSLD--FYADASSAFVDPHLCKQKIAEDRFVVIA----- 176 Query: 183 WLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 R++HPAL Q NLDTFL+ HI+I ++ +D L +L +R + M F Sbjct: 177 --RRNHPALSQGLNLDTFLQLGHINISQRRTGAGPIDVALDKLNLKRRVVMRGQHFLTVP 234 Query: 243 FMAAQPDNLLLATAPRY-CQYYN-QLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 + + D L+A P + ++Y+ +++LP P V + L WH H Sbjct: 235 AVIVKTD--LIACVPYHLAKHYDCSIYELPFELAP------------VEYFLYWHVSADH 280 Query: 301 NPKIVWLRETIKNLYASM 318 + +WLRE I + + Sbjct: 281 DHAHMWLREQIAEVVTTF 298 >UniRef50_A2SDX3 Transcriptional regulator, LysR family n=6 Tax=Burkholderiales RepID=A2SDX3_METPP Length = 326 Score = 97.1 bits (240), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 88/322 (27%), Positives = 144/322 (44%), Gaps = 37/322 (11%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++L+L+ L ++ ERSV++AA R+ T AVS L +LRA DPL V S G++PT + Sbjct: 10 IELHLVRVLHTVITERSVSRAALRLRTTQPAVSAQLKRLRALVGDPLLVRSGTGMAPTAV 69 Query: 68 MVSMEQNLAEWMQMSN---------LLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQ 118 + + + AE ++ + L D H +T F +AA L L AL + Sbjct: 70 ALQLLEPAAELLRNAERLFGSRAEALAFDPAHSET----TFRVAASDYLDPQFLPALVTR 125 Query: 119 IYQRYPQATIKL--RNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLF 176 + P +++ + ++D + RGEVD+ G P P + L Sbjct: 126 LRAEAPGIRVEVLPLSAEFDYRKGLARGEVDL-VIGNWLRP---------PAELHLGRLL 175 Query: 177 SDVPCVWLRKDHPALH--QTWNLDTFLRYPHIS-ICWEQSDTWALDNVLQELGRERTIAM 233 SD + +DHPA+ ++W + +L HI+ +D L LG R I + Sbjct: 176 SDEIVCLVAEDHPAVKSPRSWTAERYLASEHIAPTPLHPGARGVIDEHLDALGLARDIVV 235 Query: 234 SLPEFEQSLFMAAQPDNLLLATAPRYC-QYYNQLHQLPLVALPLPFDESQQKKLEVPFTL 292 P F M A L+L T +C +Y QL L +V P+PF + + Sbjct: 236 RSPYFGLGPQMVAH-SRLVLTTGRLFCSRYVGQLPGLRIVRCPVPFP-------ALVYYQ 287 Query: 293 LWHKRNSHNPKIVWLRETIKNL 314 LWH+ + + WLR ++++ Sbjct: 288 LWHELSHQSAAGRWLRGVMRDV 309 >UniRef50_C6XIT5 Transcriptional regulator, LysR family n=1 Tax=Hirschia baltica ATCC 49814 RepID=C6XIT5_HIRBI Length = 318 Score = 96.7 bits (239), Expect = 9e-19, Method: Compositional matrix adjust. Identities = 80/317 (25%), Positives = 145/317 (45%), Gaps = 35/317 (11%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 DLNLL L +ER+VT+AA+R+NVT AVS +L++LR F D LF+ +P G+ PT Sbjct: 5 FDLNLLNTFDALWRERNVTRAARRLNVTQPAVSNALSRLRETFGDELFIRTPSGVDPTER 64 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTP--RGLKFELAAESPLMMIMLNALSKQIYQRYPQ 125 + ++ E ++ L P F + A ++L L + + ++ P+ Sbjct: 65 CSEIAIDVREALRHVERTLASHDSFDPTVSERTFRIGAMDYFDHVVLPPLMEDLRKKAPR 124 Query: 126 ATIKLR----NWDYDSLDAITRGEVD-IGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 +++ YD+LD+ G++D + FSG E P I++ + + Sbjct: 125 VDLRISPVKLGETYDALDS---GDLDFLFFSGTEP-----------PKRINFSPMLEEKF 170 Query: 181 CVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQ 240 + +R +HP + Q LD + HI +D++L E G R +A++ Sbjct: 171 VLIMRANHPKMCQEMTLDAYADLTHIVFSTRGDSHTRIDDLLAENGLRRRVALT-SSHHT 229 Query: 241 SLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVP---FTLLWHKR 297 S+ + +++ + R Y +H+ L+A+ Q +E P L W +R Sbjct: 230 SIAETVRDTDMVALSPSRLAHRY--VHRGGLIAV--------QPPVEFPHFHLRLYWSRR 279 Query: 298 NSHNPKIVWLRETIKNL 314 + +P +WLR + ++ Sbjct: 280 LNSDPGAMWLRNILGDV 296 >UniRef50_B8CHD0 Regulatory protein, LysR:LysR, substrate-binding n=74 Tax=Gammaproteobacteria RepID=B8CHD0_SHEPW Length = 336 Score = 96.7 bits (239), Expect = 9e-19, Method: Compositional matrix adjust. Identities = 82/316 (25%), Positives = 144/316 (45%), Gaps = 15/316 (4%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 ++ + + L+ L +++ +SVT +AKR+ ++PS+VSK+L++LR DD LF L Sbjct: 28 LSRISMKHLITLHVMLDTQSVTASAKRLCLSPSSVSKTLSQLRQSLDDDLFYRHGNKLVA 87 Query: 65 TPLMVSMEQNLAEWMQMSNLLLDKPHHQ-TPRGLKFELAAESPLMMIMLNALSKQIYQRY 123 TPL + N+ + + NLL+ + +F LA + L+ + Q+ Sbjct: 88 TPLARRLGPNVHQIIHDMNLLITQEEFSPAEYEGRFSLAMRESTFELFAAKLTANVLQQA 147 Query: 124 PQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVW 183 P + + D + I +G +D H RS+ +S L +E L D Sbjct: 148 PNIKLDVYAKDSIGFEGIVKGNLDFILL---PHDRSQPPISQPDLV--WETLIRDEMVCL 202 Query: 184 LRKDHP-ALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 + HP A+ + ++D +L Y HI I + + L++ R +S+ +F + Sbjct: 203 MNACHPLAVKRMISIDDYLNYSHIGISDNDLNRPFFELKLEQQALNRATPLSVADFGSAA 262 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 M + LL T R+ N L LV LPFD EV ++L+WHK++ ++P Sbjct: 263 LMCHHSE--LLFTCSRHWA-ENALQARGLVIKELPFDYG-----EVAYSLVWHKQSMNDP 314 Query: 303 KIVWLRETIKNLYASM 318 W +K + A + Sbjct: 315 AHRWFYGRLKKVTAEL 330 >UniRef50_D0XC19 Putative uncharacterized protein n=1 Tax=Vibrio harveyi 1DA3 RepID=D0XC19_VIBHA Length = 317 Score = 96.7 bits (239), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 68/206 (33%), Positives = 108/206 (52%), Gaps = 11/206 (5%) Query: 1 MKKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPL 60 MK + LDLNLL ++ QE+++ KA+ R+ VT A+SKSL KLR FDDPLFV P Sbjct: 1 MKDLYSNLDLNLLRTFLVIYQEQNLQKASNRLFVTAPALSKSLTKLRNHFDDPLFVKVPT 60 Query: 61 GLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELA-AESPLMMIMLNA-LSKQ 118 GLSPT + + + L+ + P L+ ++ A SP+++ L L + Sbjct: 61 GLSPTHFATELYGVIEPTFDKLSKKLNSLNQFDPAELEGKITIAISPVLLQALGKDLFSE 120 Query: 119 IYQRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSD 178 I ++ P + L W+ +SLD + G +G + R +++LS EV+ D Sbjct: 121 ISRQAPNVELHLPCWNNNSLDDLANGTCKVGINYELPFSR-KDILS--------EVVGQD 171 Query: 179 VPCVWLRKDHPALHQTWNLDTFLRYP 204 + +++RKDHP +T +L + YP Sbjct: 172 LFGIYVRKDHPLAAKTISLADTISYP 197 >UniRef50_Q13GK2 Transcriptional regulator, LysR family n=1 Tax=Burkholderia xenovorans LB400 RepID=Q13GK2_BURXL Length = 311 Score = 96.3 bits (238), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 88/318 (27%), Positives = 139/318 (43%), Gaps = 30/318 (9%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 + TLD+ LLL L++ERSV++AA + +T SAVS+ L +LR F DPLF+ + G+ P Sbjct: 7 VDTLDIKLLLVFDALLRERSVSRAADDVGLTQSAVSQKLGRLRDIFSDPLFIRTANGMEP 66 Query: 65 TPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGLK--FELAAESPLMMIMLNALSKQIYQR 122 TP + + LAE + L+ P + F +A + L + ++I + Sbjct: 67 TPHALVLSAQLAELLARWKSLVSSQQRFEPATAERNFRVALSDGMSYHCLPPVVRRIREI 126 Query: 123 YPQATIKLRNWD-YDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFS-DVP 180 P I + + I G D+ + P+ I LF + Sbjct: 127 APNLRITIVHVGPRGGQREIESGSADLALG----------VFQQPPIGISTCELFRYTLQ 176 Query: 181 CVWLRKDHPALHQ-TWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFE 239 CV K++P L Q T + D +L HI++ ++ +++ LG +R IA+ P F Sbjct: 177 CVA-DKNNPRLKQGTMSRDEYLEASHIAVGENNVPGTLVEVIVEALGLKRKIALVTPHFV 235 Query: 240 QSLFMAAQPDNLLLATAPRYCQ-YYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRN 298 + D L+ T P Q Y +QL +P P ES +WH R Sbjct: 236 SIPNLVLGTD--LIGTFPSSAQDAYPFSNQLCFFPIPFPISESIAMA-------MWHPRF 286 Query: 299 SHNPKIVWLRETIKNLYA 316 +P +WLR NL+A Sbjct: 287 DGDPGHMWLR----NLFA 300 >UniRef50_A6FYP7 Transcriptional regulator, LysR family protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6FYP7_9DELT Length = 312 Score = 96.3 bits (238), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 88/312 (28%), Positives = 135/312 (43%), Gaps = 18/312 (5%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 + LDLNLL+ +L +ERSVT+AA R+ VT SA+S +L +LR +D L V + G++ Sbjct: 9 LAQLDLNLLVAFDVLAEERSVTRAAARLGVTQSAMSHTLRRLRGVLEDELLVRTRGGMAL 68 Query: 65 TPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGLK--FELAAESPLMMIMLNALSKQIYQR 122 TP ++ + + L P P + F L ++ L L Sbjct: 69 TPRAAALVAPVRTGLTTLQRALADPEGFDPATSERHFRLTGPDLFELLYLPRLIAGFGAS 128 Query: 123 YPQATIKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPC 181 + ++ L + L D + GE+D+ + R R + L VL D Sbjct: 129 AGRLSVTLAHVAPRQLADQLETGELDLAITARMLDGREQPAQPGLM----RRVLLRDGWR 184 Query: 182 VWLRKDHPALHQTWNLD--TFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFE 239 ++R HPAL + L FL H+ + +D VL E +RT+A+ + F Sbjct: 185 CFVRAGHPALTKRGRLSLPRFLAASHVMVSPTGRGQGIVDVVLAEQDEQRTVAVRVSSFA 244 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 + +AA D L+ TAP + L VA PLP E + WH+R S Sbjct: 245 TAPVVAASSD--LILTAPASLEAVVGHLGLVCVAPPLPLPEHS-------VDMTWHQRLS 295 Query: 300 HNPKIVWLRETI 311 +P WLRE + Sbjct: 296 EDPGHQWLREQL 307 >UniRef50_Q7VQS7 LysR-family transcriptional regulator n=2 Tax=Candidatus Blochmannia RepID=Q7VQS7_BLOFL Length = 307 Score = 96.3 bits (238), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 77/297 (25%), Positives = 129/297 (43%), Gaps = 23/297 (7%) Query: 21 QERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSMEQNLAEWMQ 80 ++ SV AAK++NVT A+SKSL K+R F+D + V S L+PTP +++++N+ + + Sbjct: 17 EDNSVNLAAKKLNVTAPAISKSLNKIRILFNDQILVRSGTKLTPTPKAMALKENIKDLVN 76 Query: 81 MSNLLLDKPHHQTPR--GLKFELAAESPLMMIMLNALSKQIYQRYPQATIKLRN-WDYDS 137 L++ P+ F +A+ S + + L + I P I L N DYD Sbjct: 77 QIETLINSNIVFEPKYTNTSFTIASNSSIFFALNTILFRDIQSNTPNIFINLVNDSDYDD 136 Query: 138 LDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPALHQTWNL 197 D + +D+ + G + SL I ++ C+ R HP L + N+ Sbjct: 137 -DFLRNNTIDL-YVGE---------MRSLNPEITIRTIYMSKSCLICRNHHPILSKHKNM 185 Query: 198 DTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQPDNLLLATAP 257 D L+YP I E D + ER I P++ ++ + +LA P Sbjct: 186 DNLLKYPFIQTKHEY--LINTDETNKYFWSERNIVGITPDYITTINAVTHSN--ILAIIP 241 Query: 258 RYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWLRETIKNL 314 Y PL FD ++ ++ WH +N+ + WLR+ KN+ Sbjct: 242 NYILTLTHQLNTPLSNFNPDFDLGKKNIIQA-----WHSKNNQSASHKWLRDHTKNM 293 >UniRef50_B6R1K2 Transcriptional regulator, LysR family n=1 Tax=Pseudovibrio sp. JE062 RepID=B6R1K2_9RHOB Length = 293 Score = 96.3 bits (238), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 84/319 (26%), Positives = 146/319 (45%), Gaps = 37/319 (11%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +DLNLLL + + ER++T+A+KR+N+T AVS +L +LR F DPLF+ + G+ PT L Sbjct: 1 MDLNLLLVFEAVYSERNLTRASKRLNLTQPAVSNALRRLRDTFQDPLFIRTADGMVPTDL 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRGLK--FELAAESPLMMIMLNALSKQIYQRYPQ 125 + + + ++M + P GL F ++ M++L L K++ ++ P Sbjct: 61 AEQLAGRVLDALEMLRSFESRESFD-PAGLSRDFRISISDYNGMLVLPRLLKELAEQAPG 119 Query: 126 ATIKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 +I + + ++ G+VD+ + ++ + YE L+SD Sbjct: 120 VSITTSQIQRAHVSEHLSTGQVDLVLAPKQDVAN-----------LSYEPLYSDDYVGVA 168 Query: 185 RKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAM------SLPE- 237 + +L+ + + H+ E +D L +LG++R + + ++P Sbjct: 169 SAHYGPEGGQMSLEEYCQREHLLFSLEGYGRSTVDVALSKLGKKRKVVLRSSHVHTIPHV 228 Query: 238 FEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKR 297 E S F+A P + L + L + L + LPF + K EV L WH R Sbjct: 229 LEGSAFIATLPRLITL----------DYLKRFELTSFSLPF---ELKGHEV--GLHWHAR 273 Query: 298 NSHNPKIVWLRETIKNLYA 316 H+P WLR IK L+A Sbjct: 274 QHHDPAHEWLRGLIKELFA 292 >UniRef50_B0BQD1 HTH-type transcriptional activator n=15 Tax=Proteobacteria RepID=B0BQD1_ACTPJ Length = 299 Score = 96.3 bits (238), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 93/312 (29%), Positives = 143/312 (45%), Gaps = 30/312 (9%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 + I T+DLNLL L+QER+VTKAA+R++VT A+S L +LR F DPLFV G+ Sbjct: 2 RDIRTVDLNLLKAFDALLQERNVTKAAQRLSVTQPAMSAMLNRLRDSFGDPLFVRVQHGI 61 Query: 63 SPT----PLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQ 118 PT LM S++ LAE +M + P QT + ++A+ + + Sbjct: 62 EPTARALALMPSVKTVLAEVNRMLRPVEFDP--QTAE-MTIKIASTDYGLEAIGTPFLSH 118 Query: 119 IYQRYPQATIK-LRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFS 177 + Q P+ + L D D L + +DI + P L S PL ++ V Sbjct: 119 LKQLAPKIRVAFLPAQDVDLLAQFEQARIDIALVSTQHIPAD---LHSKPLLTEHYV--- 172 Query: 178 DVPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWAL-DNVLQELGRERTIAMSLP 236 CV +R DHP +Q NLD F + ++ + + D L +LG+ R +++S+ Sbjct: 173 ---CV-MRADHPMANQLLNLDNFCELDFAMMSYDGGQFYGVCDEALAKLGKTRRVSVSVN 228 Query: 237 EFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHK 296 F SL ++A P + H L+ LP E Q L+ + WH+ Sbjct: 229 HF--SLLPNILRTTDVVALIPSRLSH----HLTGLICKTLPL-EVQGFSLQ----MAWHE 277 Query: 297 RNSHNPKIVWLR 308 R +P W+R Sbjct: 278 RTHQDPAYQWIR 289 >UniRef50_A9AQX4 Transcriptional regulator, LysR family n=20 Tax=Proteobacteria RepID=A9AQX4_BURM1 Length = 315 Score = 95.9 bits (237), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 89/331 (26%), Positives = 147/331 (44%), Gaps = 51/331 (15%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 ++ +DLNL + + +R++T+AA+ +N+T AVS +LA++R +DPLFV++P G+ P Sbjct: 20 LSKIDLNLFVVFDAIYNKRNLTRAAELLNLTQPAVSNALARMRKTLNDPLFVSTPAGMMP 79 Query: 65 TPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSK------- 117 TP ++ + E +Q LLD H+ G F+ A+ + + ++ L++ Sbjct: 80 TPFAENIVGRVREALQ----LLDSSVHE---GDVFDPASSERVFRLSMSDLTEALLLPAL 132 Query: 118 -QIYQRYPQATIKLRNWDYDSLD---AITRGEVDIGFSGRESHPRSRELLSSLPLAIDYE 173 ++ QR + +R++ D + A+ G VDI PL D Sbjct: 133 GELLQRQAPG-MHVRSYTMDRREIATALANGTVDIAIDA--------------PLLGDPH 177 Query: 174 V----LFSDVPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRER 229 + L D +R HP T +D +L HI + + + +D L LG R Sbjct: 178 LHQAPLVRDRYACMIRDGHPFKGDTLTMDDYLAMGHIHVSSRRKGSGHVDAELTRLGLRR 237 Query: 230 TIAMSLPEFEQSLFMAAQPDNLLLATAP-RYCQYYNQLHQLPLVALPLPFDESQQKKLEV 288 I M + + + +A + D L TAP R Q Y P L LPF + LE Sbjct: 238 NIQMRVQHYMVAPLIAMRGD--LALTAPLRLLQRY------PARILELPF---EMPGLE- 285 Query: 289 PFTLLWHKRNSHNPKIVWLRETIKNLYASMA 319 + WH+ + WLRE + L M Sbjct: 286 -YFCYWHRSADQDQANRWLRERLAELMRDMG 315 >UniRef50_D2B6V0 LysR family transcriptional regulator n=5 Tax=Actinomycetales RepID=D2B6V0_STRRD Length = 313 Score = 95.9 bits (237), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 80/309 (25%), Positives = 133/309 (43%), Gaps = 20/309 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 LDLNLL+ L L++E SV AA R+N + A+S++L ++R +DP+ V + L PTP Sbjct: 2 LDLNLLVALDALLEEGSVAGAAARLNTSAPAMSRTLGRIRRQLNDPVLVRAGRHLVPTPR 61 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRGLK--FELAAESPLMMIMLNALSKQIYQRYPQ 125 + + + + ++ ++ LL P L F L A L+ + L + QR P Sbjct: 62 ALELHAAVRDLVRQASALLVPAGDPAPATLARTFNLQASDMLLSALAAPLVLAVGQRAPG 121 Query: 126 ATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 ++ + A+ G VD+ G H + PL V + R Sbjct: 122 VVLRFLPDTLEGTSALREGRVDLEI-GVIDHAAPETCVE--PLGTGRIVGMA-------R 171 Query: 186 KDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMA 245 +DHP + + L F H+ + +D++L G R A+++ +L +A Sbjct: 172 EDHPLVIKGVTLRRFADAKHVGVSRHGRLHGPIDDLLAARGLRRRTAVTVSSHSMALLLA 231 Query: 246 AQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIV 305 Q D + LA AP L L A +P + EV + WH RN + Sbjct: 232 RQSDLVCLAPAPADDDLPAALG---LRAFEIPLELP-----EVEVAMAWHPRNDADGGQR 283 Query: 306 WLRETIKNL 314 WLR+ ++ + Sbjct: 284 WLRDQVREV 292 >UniRef50_A1WRT3 Transcriptional regulator, LysR family n=1 Tax=Verminephrobacter eiseniae EF01-2 RepID=A1WRT3_VEREI Length = 315 Score = 95.9 bits (237), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 87/320 (27%), Positives = 144/320 (45%), Gaps = 42/320 (13%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 ++ +LNLL + + RSV+ AA+ +++T AV+ +L KLR FD+PLFV + G+ P Sbjct: 3 LSEFNLNLLTFFDAIYRHRSVSAAAQELDLTQPAVTAALNKLRVHFDNPLFVRTSNGMHP 62 Query: 65 TPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGLK--FELAAESPLMMIMLNALSKQIYQR 122 TP ++ +A + S LD+P P+ K F++ MM+ L + + + Q Sbjct: 63 TPWADALAPKIAHVLD-SVRRLDEPTPFQPQSAKNQFKIYVNDIGMMLALPKIVQLLNQD 121 Query: 123 YPQATIKLRNWDYDS-LDAITRGEVDIG---FSG-----RESHPRSRELLSSLPLAIDYE 173 P + + + D ++A+ GE+D+ F G R+ H R + + Sbjct: 122 APHTQLTVIDLRQDEVVNALDVGEIDLAIGYFVGVPNWARQQHLRDTSYVCA-------- 173 Query: 174 VLFSDVPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWA-LDNVLQELGRERTIA 232 +RKDHP++ T L +L H ++ W T+ LD L + G R IA Sbjct: 174 ----------MRKDHPSIGDTMTLTQYLNARH-AMYWTHGSTYGRLDEALAKRGFSRDIA 222 Query: 233 MSLPEFEQSLFMAAQPDNLLLATAPRYCQ-YYNQLHQLPLVALPLPFDESQQKKLEVPFT 291 + +P F+AA D + T P + L + LV +P+ Q K+ Sbjct: 223 VRIPRLGAIPFLAAFSD--FVVTIPEDLGLLFRDLIPIKLVPVPISLPSFQVKQ------ 274 Query: 292 LLWHKRNSHNPKIVWLRETI 311 WH+R + WLR I Sbjct: 275 -YWHERLHADSAHKWLRTLI 293 >UniRef50_B7RV99 Transcriptional regulator, LysR family protein n=1 Tax=marine gamma proteobacterium HTCC2148 RepID=B7RV99_9GAMM Length = 303 Score = 95.9 bits (237), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 81/312 (25%), Positives = 139/312 (44%), Gaps = 25/312 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +DLNL + L +ERSVT+ A+ +++T AVS +L++LR FDD LFV SP G+ PTP+ Sbjct: 6 VDLNLFVVFDALYRERSVTRVAQALHLTQPAVSNALSRLRQSFDDQLFVRSPRGMQPTPV 65 Query: 68 --MVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQ 125 +S++ A + L + + F L ++L L + Q P Sbjct: 66 AEAISVDVQKALGLLQKTTLSGQRFDPGSAEMTFRLGMSDVAQNMVLPGLHNALAQLAPG 125 Query: 126 ATIKLRNWDYDSLDA-ITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 TI+ D S A + G++D+ + + R L L L +L+ V + Sbjct: 126 VTIEAYYLDRASAVAQLKSGDLDLLLDAPQVNARE---LGQLHLG---SLLYR----VAM 175 Query: 185 RKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 K HP ++D +L H+ + +D L +G R + + + ++ + + Sbjct: 176 AKAHPLAQVDLDIDQYLAAKHVHVSARPRGRGQVDLALHAIGHRRKVVVRVQQYAVAAAI 235 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 AQ D LL TAP + +LH +V P + + L WH+ + +P Sbjct: 236 TAQSD--LLWTAPGSVIDHPELH---VVETPFQVE-------SLVLNLYWHRSAAEDPAN 283 Query: 305 VWLRETIKNLYA 316 W+R+ + +A Sbjct: 284 AWMRKMLAQQFA 295 >UniRef50_A0KFY0 Transcriptional regulator, LysR family n=2 Tax=Aeromonas RepID=A0KFY0_AERHH Length = 307 Score = 95.5 bits (236), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 87/319 (27%), Positives = 139/319 (43%), Gaps = 19/319 (5%) Query: 4 SITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLS 63 +++ L L+ L LL+ +SVT+ A+R+ TPS VSK+L +LR D L L Sbjct: 5 ALSRLGGRHLVTLHLLLDSQSVTRTAERLCTTPSTVSKTLNQLRDLLGDQLLYRQGNQLL 64 Query: 64 PTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFEL--AAESPLMMIMLNALSKQIYQ 121 TP + L + N L + P + +L A M+ + + Q+ + Sbjct: 65 LTPFAERLGPTLHRLLSELNGLTGQGGFD-PASWQGQLTFALRESGMVWPMGPILAQLMR 123 Query: 122 RYPQATIKLRNWDYDSLDAITRGEVD-IGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 P +RN D L A+ G++D + +S P R+ + +E L D Sbjct: 124 EVPGLVPDIRNKDEQGLAALAAGKLDFVILPHDQSQPLPRQQ------GLVWETLREDKL 177 Query: 181 CVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQ 240 LR DHPAL ++W+LD +L + HI+I ++ + L +L R IA LP+F Sbjct: 178 VCLLRADHPALARSWDLDAYLSWRHIAIRDQELANPFFEQSLAQLQVRRQIAAILPDFGS 237 Query: 241 SLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 + + Q D +L A + Q LV+ P+PFD V +L+W+ Sbjct: 238 AAALLRQSDLILTAIG----GWAEQAAPHALVSRPVPFDYG-----AVTHSLVWYGPAGE 288 Query: 301 NPKIVWLRETIKNLYASMA 319 P W R+ I L + Sbjct: 289 EPARRWFRQRILQLARELG 307 >UniRef50_A8FU12 Transcriptional regulator n=2 Tax=Gammaproteobacteria RepID=A8FU12_SHESH Length = 304 Score = 95.5 bits (236), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 85/326 (26%), Positives = 155/326 (47%), Gaps = 41/326 (12%) Query: 2 KKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLG 61 + ++ +DLNLL L+ L++ER V +AA+++NV+ SA+S +LA+LR FDD LF+ + G Sbjct: 3 ENNLAKVDLNLLKSLRALIEERHVGRAAQKMNVSQSAMSHTLARLRGVFDDSLFIRNAKG 62 Query: 62 LSPTPLMVSMEQNLAEWM-QMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIY 120 L PT + + L + ++ +LL K + F + ++ L+ K+I Sbjct: 63 LEPTARAIELSDKLRFILREIDSLLAPKTLELSHIHAHFRIQTHDFILASYLSKAFKRIN 122 Query: 121 QRYPQATIKLRNWDYDSLDAITRGEVD-IGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 P I ++ D + D + GE++ I +G ++ PR + + ++ Sbjct: 123 HEAPNILIDIKILDETAYDKLDDGELEMIIGAGLQAKPR----------FMQKRLTDENL 172 Query: 180 PCVWLRKDHPALHQTWNLDTFLRYPHI--SICWEQSDTWALDNVLQELGRER------TI 231 C+ L K +P L + W +T RYPHI S+ ++ D + L + + T+ Sbjct: 173 VCL-LDKGNPVL-KNWTPETIFRYPHIKSSLLDDRDDPVSKYGKAMGLPKRKIGFLAETL 230 Query: 232 AMSLPEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFT 291 LP S +A PD++ A + Q Y + + PLP P T Sbjct: 231 NFQLPLLSDSDLIAFLPDSI----AKKGSQVYGLV--VKECPFPLP-----------PLT 273 Query: 292 L--LWHKRNSHNPKIVWLRETIKNLY 315 + +WH+R+ ++ W+RE I++++ Sbjct: 274 IRAMWHERHQNDVVHQWIREKIEDVF 299 >UniRef50_Q12H69 Transcriptional regulator, LysR family n=14 Tax=Burkholderiales RepID=Q12H69_POLSJ Length = 342 Score = 95.1 bits (235), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 87/318 (27%), Positives = 141/318 (44%), Gaps = 30/318 (9%) Query: 7 TLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTP 66 TLDLNLL +M ERS+T+AA+ +++T AVS +L +LR D L S G++PTP Sbjct: 32 TLDLNLLRVFDEVMAERSLTRAARNLSLTQPAVSNALRRLRETLGDELVQRSGQGMAPTP 91 Query: 67 LMVSMEQNLAEWMQ--MSNLLLDK--PHHQTPRGLKFELAAESPLMMIMLNALSKQIYQR 122 ++ + E +Q +L+ D+ P T F LA ++ L + + Q Sbjct: 92 RARAIWPAVREALQRLQESLIPDEFVPGQAT---TTFVLAMADATAAELIPGLIETLEQE 148 Query: 123 YPQATIKL---------RNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYE 173 P ++++ R D + D + G + +H +S E P+ + Sbjct: 149 APGVSMRVIPLTTRDPRRLLDEQACD-LAVGYFPSVLADLTAHAQSGE-----PMPFQHR 202 Query: 174 VLFSDVPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAM 233 L+ +RK HP LD F H+ + + +D L LGRER + + Sbjct: 203 RLYDGEYVCVMRKGHPLASGPLTLDRFCAARHMLVSFSGRPYGFIDESLASLGRERQVVL 262 Query: 234 SLPEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLL 293 ++ +F + + A + LL PR+ + + LV PLPFD S V + Sbjct: 263 TVNQFFTAGRVVANSN--LLTVLPRHFVRVTGIAE-QLVLRPLPFDVS-----AVHVDAV 314 Query: 294 WHKRNSHNPKIVWLRETI 311 WH+R+ VWLRE + Sbjct: 315 WHRRSQQRGAHVWLREAV 332 >UniRef50_Q2S713 Transcriptional regulator n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2S713_HAHCH Length = 329 Score = 95.1 bits (235), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 79/321 (24%), Positives = 147/321 (45%), Gaps = 48/321 (14%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +DLNLL+ +M E S++ AA+R+++T AVS ++A++R ++DPLFV + G+ PT Sbjct: 4 IDLNLLVIFDAIMTESSISGAAERLSMTQPAVSNAVARMRQVWNDPLFVKNGRGIQPTTH 63 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRGL-------KFELAAESPLMMIMLNALSKQIY 120 +S+ W Q+S L+ P+ +F + ++ + + + Sbjct: 64 ALSL------WHQVSGPLIQLKDAVNPQDFDPSTTRRRFRVGMSDITTDLIWLPMRRMVE 117 Query: 121 QRYPQATIKLRNWDYDSLDAI-TRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLF-SD 178 P + + ++ ++I T GEVD+ ++ + + LF SD Sbjct: 118 TEAPNIDLHAVPANGNNSESILTNGEVDLIVG----------VMQEFRTSFRNDFLFESD 167 Query: 179 VPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEF 238 C +RKDHP + L+ +L+ H+ + T +D L + G R +AM++ F Sbjct: 168 YVCA-MRKDHPLAAEPLTLEKYLKADHLLVSLTGEATGFVDITLSQQGLSRRVAMTVNHF 226 Query: 239 -------EQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFT 291 E S ++ P N+++A + + + + PL P P + Sbjct: 227 ASVPALLEGSDLISIVP-NMVIAKGAKCGSLH--VTKPPLEIRP------------TPVS 271 Query: 292 LLWHKRNSHNPKIVWLRETIK 312 ++WH R+ +P ++WLRE IK Sbjct: 272 MIWHARHDRDPGVLWLREKIK 292 >UniRef50_A0NZC9 LysR family regulatory protein n=3 Tax=Rhodobacteraceae RepID=A0NZC9_9RHOB Length = 305 Score = 94.7 bits (234), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 77/315 (24%), Positives = 142/315 (45%), Gaps = 22/315 (6%) Query: 4 SITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLS 63 ++ + DLNLL+ + +MQ S++ AA I ++PSAVS +LA+LR +D LF + G+S Sbjct: 3 NLRSFDLNLLVIFRAIMQRGSISGAANEIGLSPSAVSHALARLRVMLNDELFFRTAEGVS 62 Query: 64 PTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGLK--FELAAESPLMMIMLNALSKQIYQ 121 PT + ++ + + + H P F + + +L L+K++ Sbjct: 63 PTERARELSVDIERGLSFISTAISLQHQFVPAETNRVFTMQVADYVAGFLLPRLAKRLQS 122 Query: 122 RYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPC 181 P TI + + R ++ + + P E++ S + L +D Sbjct: 123 EAPGITIDILPFSISPESVWDRVDMQVRLTPGRLQP---EMVRS-------QRLLADEIV 172 Query: 182 VWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQS 241 V +R+ HP + + + + PH+ + + T +++ L G +R +AM++ + + Sbjct: 173 VLMRRGHPRVDEPMTAELYAELPHVKLSQSATGTTVIEDALAARGLKRHMAMTVASWFEI 232 Query: 242 LFMAAQPDNLLLATAP-RYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 + A+ D L+A AP R +L +L + PLP DE + F L W R Sbjct: 233 PDIVARSD--LIAIAPQRLLSLDPRLGKLH--SAPLPLDE-----VVFSFDLCWDLRKER 283 Query: 301 NPKIVWLRETIKNLY 315 P WLR+ I ++ Sbjct: 284 EPGQKWLRQLIVEMF 298 >UniRef50_B6JAE3 MexT protein n=1 Tax=Oligotropha carboxidovorans OM5 RepID=B6JAE3_OLICO Length = 311 Score = 94.7 bits (234), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 76/317 (23%), Positives = 142/317 (44%), Gaps = 28/317 (8%) Query: 2 KKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLG 61 +K++ LDLNLL+ + RS T AA +++++ AVS +L++LR DPLFV Sbjct: 11 QKNLARLDLNLLVVFDAIASARSTTLAATQLSLSQPAVSHALSRLRRLIGDPLFVRGRGR 70 Query: 62 LSPTPLMVSMEQNLAEWMQMSNLLL-DKPHHQTPRGLKFELAAESPLMMIMLNALSKQIY 120 TP M + + + ++L + P F +AA M+ ++ L + ++ Sbjct: 71 FVLTPRAEGMVLQVRDILNAVGVVLANAPFDPAENERTFRIAASDYTMLTIMPTLVRTLH 130 Query: 121 QRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEV--LFSD 178 + P+A +++ + ++ + ++D F + P Y LF + Sbjct: 131 RASPRAKLEVFSVGSQTIAQLESNDLDCTFWALK------------PPGAPYVTMPLFRE 178 Query: 179 VPCVWLRKDH----PALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMS 234 +L + H PA LD ++ YPH+ + S+ +D L +GR+RTI ++ Sbjct: 179 SSKGFLDRRHPLAKPANRGRLTLDDYVGYPHVIAKFRDSNPSPVDVALAAVGRKRTIGLA 238 Query: 235 LPEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLW 294 F ++ A L+AT P + + L LP+ ++ ++L+W Sbjct: 239 SSSFIGNI--TALSGTNLIATLPSRLSSIAESYGLKSFDLPIRIEDYT-------YSLVW 289 Query: 295 HKRNSHNPKIVWLRETI 311 H+R +P +WLR+ I Sbjct: 290 HQRTDADPACIWLRKVI 306 >UniRef50_Q89IY7 Transcriptional regulatory protein n=1 Tax=Bradyrhizobium japonicum RepID=Q89IY7_BRAJA Length = 307 Score = 94.7 bits (234), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 92/324 (28%), Positives = 146/324 (45%), Gaps = 28/324 (8%) Query: 1 MKKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPL 60 M S LDLNLL + LM E SVT+AA + +T AVS +LA+LR DPLFV S Sbjct: 1 MFVSFRALDLNLLKVFEALMTEGSVTRAASALTMTQPAVSNALARLRDALGDPLFVRSGT 60 Query: 61 GLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNALSKQI 119 G+ PT V + + + E ++ LD+ R +F L+ + +++ L + Sbjct: 61 GIRPTQRAVVLWEPIGEALESVRGALDEQVFDPARAQTEFSLSMSDYVSSLVMPDLLGHL 120 Query: 120 YQRYPQATI-KLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFS- 177 + P+A + + N + D + VD S + + P AI L++ Sbjct: 121 GKVAPKARVHTVPNTILEIADQLEDNRVDCVMSVYVNEAQQ-------PAAIRSRSLWTV 173 Query: 178 DVPCVWLRKDHP-ALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLP 236 D C ++R+ HP A + + TFL H+ + + D L G R + ++ Sbjct: 174 DYAC-FMRRGHPLAGMKRLSTRTFLNAGHVDVSLAGKTMPSYDLFLASRGLSRNLVATVN 232 Query: 237 EFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLV-ALPLPFDESQQKKLEVP---FTL 292 + + + Q D L+A P +Q PL+ A+PLP L+ P +L Sbjct: 233 HYSAAYEVVRQSD--LIAVLP--SDLRSQSRHAPLLHAMPLP--------LQAPPRIVSL 280 Query: 293 LWHKRNSHNPKIVWLRETIKNLYA 316 WH+RN P WLRET+ ++A Sbjct: 281 FWHQRNDTVPAQRWLRETLVEMFA 304 >UniRef50_A8H9L3 Transcriptional regulator, LysR family n=5 Tax=Shewanella RepID=A8H9L3_SHEPA Length = 310 Score = 94.7 bits (234), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 89/308 (28%), Positives = 140/308 (45%), Gaps = 27/308 (8%) Query: 9 DLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLM 68 DL+LL+ LQ+L++ERSVT+AAKR++++ SA S+ LA+LR DDPLF L PT Sbjct: 10 DLSLLIALQILVEERSVTQAAKRLHLSQSATSRILARLRDMLDDPLFSRVGQQLVPTSFA 69 Query: 69 VSMEQNLAE-WMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQAT 127 + Q L + Q+ LL K +F +A M ++ + IY++ PQ Sbjct: 70 LECYQQLRQPTGQLIELLTPKAFVPQECQQQFSIAVTDYAMQALIPFILPIIYKKAPQIR 129 Query: 128 IKLRNWDYDSLDA---ITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 +++ L A + ++ + + ++ + L + V C+ L Sbjct: 130 LEIVPVQQKELQAQLSVKGADMAVCRAIGQTGNLQQTFLGKV-----------GVSCL-L 177 Query: 185 RKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 +HP + LD +L YPH +I LD+ + L RT + P + +L Sbjct: 178 SPNHPLANSDITLDDYLHYPHATIAISDGVKALLDDAI-SLYPARTELLRTPHLDTAL-- 234 Query: 245 AAQPDNLLLATAPR-YCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 A Q N L+ T P + Q H+L + PLPF K + + L WH R + Sbjct: 235 ALQSVNPLIITLPEGMAEIAAQRHKLKVK--PLPF-----KLQSLDYKLFWHSRCDQDKA 287 Query: 304 IVWLRETI 311 WLRE I Sbjct: 288 QKWLREEI 295 >UniRef50_B7RWY7 LysR substrate binding domain protein n=2 Tax=unclassified Gammaproteobacteria (miscellaneous) RepID=B7RWY7_9GAMM Length = 327 Score = 94.4 bits (233), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 84/316 (26%), Positives = 147/316 (46%), Gaps = 26/316 (8%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 K + +DLNLL+ LQ+L++ER+V++AA+R+ +T A+SK+L++LRA FDD LF S G+ Sbjct: 4 KELAKIDLNLLISLQVLLEERNVSRAAERLFITQPAMSKTLSRLRAVFDDALFTRSSHGM 63 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFE--LAAESPLMMIMLNALSKQIY 120 PTP + + L E + L+ K P + E LA + + +L L+K++ Sbjct: 64 QPTPRALELTDRLTEILSGIGQLVSKQAF-NPALIDTEITLALSEYIGVALLPTLAKRLQ 122 Query: 121 QRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESH--PRSRELLSSLPLAIDYEVLFSD 178 + P +++ + L+ + G++D R H P R ID L S Sbjct: 123 MQAPNLHLRIVTRVENQLEQLALGKLDFAVHIRHQHYSPDFR--------TID---LGSS 171 Query: 179 VPCVWLRKDHPALHQTWNLDTFLRYPHISICW---EQSDTWALDNVLQELGRERTIAMSL 235 P + +R++HP +L YP + + EQ A +++ LG ++ + Sbjct: 172 PPVLLIRENHPLQAGNISLADLANYPVVRLYVSDREQLQVKAGEDLFDGLGTNTRGSLEI 231 Query: 236 PEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWH 295 ++ + D +L P + + + ALP+P + V + L H Sbjct: 232 SHLMTAMEVLRNTDYYML--GPAFLTQNESISH-GITALPVP----RTGNSSVNYVLAAH 284 Query: 296 KRNSHNPKIVWLRETI 311 +R ++P WL E I Sbjct: 285 QRTENSPLHNWLWEEI 300 >UniRef50_B1KAV0 Transcriptional regulator, LysR family n=5 Tax=Burkholderia cepacia complex RepID=B1KAV0_BURCC Length = 345 Score = 94.4 bits (233), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 83/321 (25%), Positives = 136/321 (42%), Gaps = 36/321 (11%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 I +DLNLL L+++R VT+A I ++ A+S +L+KLR F+DPLFV + G+ P Sbjct: 3 IRQVDLNLLKVFDALLKKRHVTQAGVSIGLSQPAMSYALSKLRELFEDPLFVRTGRGMEP 62 Query: 65 TPLMVSMEQNLAEWMQMSNL-LLDKPHHQTPRGLK-FELAAESPLMMIMLNALSKQIYQR 122 TP ++ + +A + + +L P + + F L M+ L L + + Sbjct: 63 TPRAQALGEPVARLLDLVQTEILPMPEFRPAESSRNFVLCMSDIGEMVFLPRLESFLDKA 122 Query: 123 YPQATIKLRNWDYDSL-DAITRGEVDIG---FSGRESHPRSRELLSSLPLAIDYEVLFSD 178 P +IK L + + G+VD+ F G S ++ + L+ Sbjct: 123 APHVSIKTVALSMPELEEGLASGDVDLAIGYFPGLNSE------------SLKRKALYRH 170 Query: 179 VPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEF 238 R DHP + T +LD + H+ + E + L + LG + S P F Sbjct: 171 SYVCIARDDHPEIGDTLSLDQYRAAAHVMVHPEGREQDVLARTHERLGIRVNVRFSTPRF 230 Query: 239 EQSLFMAAQPDNLLLATAP-----RYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLL 293 F+ A D ++A P R+ ++ N + LPLPF + L Sbjct: 231 IGVPFVVAGSD--MIAAVPQAVGRRFAEFVN------VKLLPLPFPAPTYE-----LYLH 277 Query: 294 WHKRNSHNPKIVWLRETIKNL 314 WH R H P W+R+ + L Sbjct: 278 WHPRFHHEPANRWIRDAMSEL 298 >UniRef50_C9PC13 Transcriptional regulator LysR family n=1 Tax=Vibrio furnissii CIP 102972 RepID=C9PC13_VIBFU Length = 310 Score = 94.4 bits (233), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 79/319 (24%), Positives = 141/319 (44%), Gaps = 21/319 (6%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 K +DLNL+ + + +SV A R+N++ SA S SLA+LR+ +D LF+ + Sbjct: 2 KKFDNIDLNLMKVFYYVYETQSVQMTADRLNISQSACSHSLARLRSRLNDELFIRINGKM 61 Query: 63 SPTPLMVSMEQNLAEWMQM--SNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIY 120 PT + Q++ +++ S L P F ++ ++ L+ + Sbjct: 62 IPTNQAEQLAQSIQPALELLYSGLNTATPFDPAVGQHHFVISGYDFSAWCVMPTLTAYLA 121 Query: 121 QRYPQATIKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 + +P T++L D + + GE+D+ +S + +++ + Y Sbjct: 122 EHFPNITVRLVQSDKQIPTEHLESGEIDLSLGFDHEAEQSNHIGNAIWQSGQY------- 174 Query: 180 PCVWLRKDHPAL--HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPE 237 C+ + H AL + +LDTFL YPH+ + +D L +L ++R +A++LP Sbjct: 175 -CIAMDNQHDALMAGRPLDLDTFLAYPHVLVTPWNEPRGIVDATLGKLNKKRQVAVTLPS 233 Query: 238 FEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKR 297 + F+ + N LA Y + QL VA P+P + K L WHK Sbjct: 234 VLSAPFL-LKGTNYFLAAPESYLETLADTLQLAFVAPPIPIPQYHIK-------LYWHKV 285 Query: 298 NSHNPKIVWLRETIKNLYA 316 +PK+ WL + +L A Sbjct: 286 REKDPKVNWLIHRLCDLAA 304 >UniRef50_A5F3E5 Transcriptional regulator, LysR family n=29 Tax=Vibrio RepID=A5F3E5_VIBC3 Length = 308 Score = 94.4 bits (233), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 81/308 (26%), Positives = 143/308 (46%), Gaps = 17/308 (5%) Query: 9 DLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLM 68 DLNLL +M+ SV+KAA ++ +T +AVS++L++LR DPLF+ GL PT Sbjct: 8 DLNLLTVFDSVMKLGSVSKAADKLGMTSAAVSQNLSRLREQVGDPLFIRQGRGLQPTQYA 67 Query: 69 VSMEQNLAEWMQMSNLLLDKPHHQTPRGLK--FELAAESPLMMIMLNALSKQIYQRYPQA 126 ++M +++AE + L+ P K F + + +++L L ++I P Sbjct: 68 LNMHKHVAEGLSAIRFGLETDAGFDPATSKREFIIGGQGYFDLVVLPPLLQKISDIAPHI 127 Query: 127 TIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRK 186 T+ L++++ D T +V S RE+ L S P + +V + V+ K Sbjct: 128 TVNLKSYEDDHF---TPSQV---LSEREADLFLAALPISHPSIVTTQVAEEALVVVY-AK 180 Query: 187 DHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAA 246 +HP L T + + F H ++ + + +++ ++ R + E +L A Sbjct: 181 NHPRLGSTLSFEQFFAEKHTALTSRRFGNYLFSSLVDQVLPARRVHYQ-SESMLNLMATA 239 Query: 247 QPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVW 306 +LL T R + + +L L PLPF+ VP + WHK + ++W Sbjct: 240 SVTDLLCFTPKRLADMWAE--KLGLQIQPLPFEIR-----SVPTFMCWHKAKQQDKGLIW 292 Query: 307 LRETIKNL 314 LRE I+ + Sbjct: 293 LREQIEAI 300 >UniRef50_A9FB16 Transcriptional regulator, LysR family n=3 Tax=Sorangium cellulosum RepID=A9FB16_SORC5 Length = 349 Score = 94.4 bits (233), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 79/314 (25%), Positives = 138/314 (43%), Gaps = 24/314 (7%) Query: 7 TLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTP 66 ++D +L++ L L+QERSVT+AA+R+ VT ++S +L++LRA F DPL V ++ + Sbjct: 45 SVDTHLVVALHALLQERSVTRAARRVGVTQPSMSHALSRLRAHFGDPLLVQVGRQMTLSE 104 Query: 67 LMVSMEQNLAEWMQMSNLLLDKPHHQTPR--GLKFELAAESPLMMIMLNALSKQIYQRYP 124 + AE ++ + + PR F L A L +++L L++ + P Sbjct: 105 RARDLLPRAAEAVERLEQVFGQAERFDPRRSTRTFRLVATDNLELLVLPPLTRILAAEAP 164 Query: 125 QATIKLRNWDYDSLDAITRGEVD--IGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCV 182 ++ RN D + + RGE+D +G G +P L ++ Sbjct: 165 HVNLRCRNIPPDFAELLRRGELDAKLGRGG------------PVPDGCRSTQLAAEQLVC 212 Query: 183 WLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 +R+ HPA + + H+ I D +D L G R + +++ F + Sbjct: 213 LMRRGHPASRKALTAARYAACEHLMISPHGEDHNVIDQELAARGLRRRVTLTVSHFLVAP 272 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 F+ + D LLL + R + +L LV P P + TL+W +R+ + Sbjct: 273 FILSGSD-LLLTVSARVAVALAR--KLDLVVRPCPLEARGYT-----LTLVWPERSEGDE 324 Query: 303 KIVWLRETIKNLYA 316 WLR I+ A Sbjct: 325 GHSWLRAAIERAVA 338 >UniRef50_UPI0000383CFA COG0583: Transcriptional regulator n=1 Tax=Magnetospirillum magnetotacticum MS-1 RepID=UPI0000383CFA Length = 329 Score = 94.0 bits (232), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 96/329 (29%), Positives = 153/329 (46%), Gaps = 32/329 (9%) Query: 1 MKK-SITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSP 59 MKK + TLD+ + L +L+ E +V++AA+R+ VS +L +LR DPL V Sbjct: 1 MKKVAPATLDVRAMRTLLVLLTECNVSRAAERLGQAQPTVSLALKRLREMLGDPLLVRYG 60 Query: 60 LGLSPTP----LMVSMEQNLAEW-MQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNA 114 L PT L VS+E L+E +++ P H F LAA + L + L Sbjct: 61 GSLVPTERGLDLKVSLEAILSEIDARLTPHPTFDPAHSD---RTFRLAANNCLGSVFLPP 117 Query: 115 LSKQIYQRYPQATIKLRNWD--YDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDY 172 L + I + P T+++ D L + G +D G P S +S+L Sbjct: 118 LVRTIRRAAPGVTVEVGQTPPMEDLLRQMAEGAID-AVIGNWPQPPSHLRISTL------ 170 Query: 173 EVLFSDVPCVWLRKDHPALHQTWNLD--TFLRYPHISICWEQSDTWA-LDNVLQELGRER 229 L +D+ CV +R +H + +D FL H+S +++ + +D L ELG +R Sbjct: 171 --LSTDIVCV-MRPNHRLARREGRIDLADFLAEGHLSPTSDRNAQLSPIDGRLIELGLKR 227 Query: 230 TIAMSLPEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVP 289 IA+++PE+ +M AQ D LL T + + Q LV P ++ + Sbjct: 228 RIAVTVPEYAMVPYMLAQSD-LLFTTGRHFAEQIAQSFAFSLVDAP-------EELGRMS 279 Query: 290 FTLLWHKRNSHNPKIVWLRETIKNLYASM 318 F +LWH H+P WLR TI+++ A + Sbjct: 280 FYMLWHDCKHHSPAHAWLRRTIRSVAADI 308 >UniRef50_A6T413 Transcriptional regulator, LysR family n=1 Tax=Janthinobacterium sp. Marseille RepID=A6T413_JANMA Length = 302 Score = 94.0 bits (232), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 78/318 (24%), Positives = 144/318 (45%), Gaps = 25/318 (7%) Query: 4 SITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLS 63 +I ++DLNLL+ +++ER+VT AA R+ V+ A+S +LA+LR F+DPLFV + G+ Sbjct: 2 NIASVDLNLLVAFDAIVKERNVTSAAVRLGVSQPAMSNALARLRIIFNDPLFVRTSQGMQ 61 Query: 64 PTPLMVSMEQNLAEWMQM--SNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQ 121 PTP + + ++ ++ S L ++ F +++L L K I Sbjct: 62 PTPYAEQLIEPVSRACELITSALQINSVFDPATTTKTFSFYMTEIGEILLLPKLLKHIQV 121 Query: 122 RYPQATIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 P A +++R + + +A+ GE+D+ L L + L++D Sbjct: 122 AAPNACVRVRRIPEQGAKEAMANGEIDLAVG----------LFPYLKAGFYQQRLYTDKF 171 Query: 181 CVWLRKDHPALHQTWNLDTFLRYPHISICWEQSD-TWALDNVLQELGRERTIAMSLPEFE 239 +R+ HP +H + ++ PH+ + + A++ +L R I M+ F Sbjct: 172 ACIVRQGHPTVHDSLTPQQYVDTPHVIVMSANTGHDAAIEKILLTEHLRRKIVMTSQNFL 231 Query: 240 QSLFMAAQPDNLLLATAP-RYCQYYNQLHQ-LPLVALPLPFDESQQKKLEVPFTLLWHKR 297 + Q D +AT P R Q + ++ P+PF K+ WH+R Sbjct: 232 VLPMIIEQTDA--IATIPFRMAQKIASYSTGIKILESPIPFPNVDIKQ-------HWHER 282 Query: 298 NSHNPKIVWLRETIKNLY 315 ++P W+R+ + L+ Sbjct: 283 FHYDPANKWMRDLMVTLF 300 >UniRef50_Q88I06 Nodulation protein d1 n=4 Tax=Gammaproteobacteria RepID=Q88I06_PSEPK Length = 312 Score = 94.0 bits (232), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 79/314 (25%), Positives = 149/314 (47%), Gaps = 29/314 (9%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 LDLNLL+ L +L++E+++T+AA+R+++T SA S L +LR +F+D L V + PTP Sbjct: 6 LDLNLLVALDILLEEQNITRAAERLHMTQSATSGVLGRLRTFFEDELLVQVGRKMQPTPY 65 Query: 68 MVSMEQNLAE-WMQMSNLLLDKPHHQTPRGLK-FELAAESPLMMIMLNALSKQIYQRYPQ 125 + + + + E + + + KP + F L A L+ ++ + ++I+Q PQ Sbjct: 66 ALELAKPVREVLLTIRASITAKPVFDPAASKRHFRLVASDYLISVVFAQVIQKIHQEAPQ 125 Query: 126 ATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPC-VWL 184 T ++ S + + RGEVD+ R L+ P + +E D C VW Sbjct: 126 ITFEMIGPGDSSAELLMRGEVDMMIVP------ERYLIEGHPAQLLFE---EDHVCVVW- 175 Query: 185 RKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDN-VLQELGRERTIAMSLPEFE---Q 240 +D+P + + L+ +++ HIS+ + ++ ++++ + + G R + + +F Q Sbjct: 176 -RDNPEVGEHLTLEQYMQMGHISVGFGRNRHLSIEDWFMNQYGFNRRLEVITNDFNTLPQ 234 Query: 241 SLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 L + + A Y Y P V +P+ + +LWH+ Sbjct: 235 LLVGTVRVATMHRRLAELYAGYLPLRLLPPPVKIPVMRE-----------FMLWHRSMDG 283 Query: 301 NPKIVWLRETIKNL 314 +P WLRE I ++ Sbjct: 284 DPMHRWLRERISDV 297 >UniRef50_C0ZNV8 Putative LysR family transcriptional regulator n=1 Tax=Rhodococcus erythropolis PR4 RepID=C0ZNV8_RHOE4 Length = 298 Score = 94.0 bits (232), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 84/319 (26%), Positives = 137/319 (42%), Gaps = 43/319 (13%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +DLNLL L+ E SVT AA+R+N++ A S++L +LR DDP+FV + GL PTP Sbjct: 5 MDLNLLRVFDALVAEGSVTGAAERLNLSIPATSRALGRLRRAMDDPIFVRAGRGLVPTPF 64 Query: 68 MVSMEQNLAEWMQMS-NLLLDKPHHQTPRGLKFELAAESPLMMIMLN---------ALSK 117 + + ++ + LL+D+ + FE A +I +N AL + Sbjct: 65 ALRAAPQVRSLLEGAQGLLIDRKN--------FEPAELERTFVIRINEGTAASLTPALVR 116 Query: 118 QIYQRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFS 177 + P A I+ + +D++ G +D+ G + P S + E+L+ Sbjct: 117 RFAAEAPNAVIRCVGEGNEDVDSLRNGSIDLDI-GADPLPSSD---------VCSEILYR 166 Query: 178 DVPCVWLRKDHP-ALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLP 236 + + K P A L +PH+S +D+ L +G R + + Sbjct: 167 EGHVGLVSKSSPLARTAQPTLAQLCEHPHVSTSRRGRTHGPIDDALSAVGMRRRVIAVVA 226 Query: 237 EFEQSLFMAAQPDNLLLATAP-RYCQYYNQLHQLPLVALP--LPFDESQQKKLEVPFTLL 293 + MAA D L+A P R +Y+ + A+P LP Q+ Sbjct: 227 SPVAAALMAADSD--LVALVPERLARYFAARLDVAWFAVPTELPAVTIHQQ--------- 275 Query: 294 WHKRNSHNPKIVWLRETIK 312 WH R H+P WLRE ++ Sbjct: 276 WHGRLDHDPAHKWLREQVR 294 >UniRef50_D0LKM3 Transcriptional regulator, LysR family n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LKM3_HALO1 Length = 307 Score = 93.6 bits (231), Expect = 8e-18, Method: Compositional matrix adjust. Identities = 90/319 (28%), Positives = 145/319 (45%), Gaps = 38/319 (11%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 ++ ++LNLL+ L L+ ERSV++AA+R V+ A+S+SL +LRA FDD L L Sbjct: 6 LSEINLNLLVSLDALLTERSVSRAARRTGVSQPAMSQSLRQLRAIFDDALLARDRGVLVL 65 Query: 65 TP----LMVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIY 120 TP LMV + L ++ L +KP +F +A + +L L ++ Sbjct: 66 TPAAERLMVPLRHALVAVQRV--LDGEKPFDPGRAERRFTIAVGDFAAVTLLPPLLERAS 123 Query: 121 QRYPQATIKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDY--EVLFS 177 + P +R + L + + GE D+ + L + D+ ++L+ Sbjct: 124 REAPGIGFDVRPAEPTRLFERLATGEFDLVIGAK------------LDASGDFMRQLLYR 171 Query: 178 DVPCVWLRKDHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLP 236 D R+DHP L +L+ + PH+ I +D +L E G++R IA+ +P Sbjct: 172 DGFVCMARRDHPELSGDALDLERYAALPHVLISPTGEGPSVVDRLLAERGKQRRIALRIP 231 Query: 237 EFEQSLFMAAQPDNLLLATAPR-YCQYYNQLHQLPLVALPLPFDESQQKKLEVP-FTL-- 292 F + M + D L+ TAPR + H L L P LE+P F + Sbjct: 232 YFLAAPLMVVRSD--LVLTAPRSVAGAFASTHALALFEPP----------LELPSFGVYQ 279 Query: 293 LWHKRNSHNPKIVWLRETI 311 LWH+R + WLRE + Sbjct: 280 LWHQRYQSDDAHRWLRELV 298 >UniRef50_B1K4K0 Transcriptional regulator, LysR family n=3 Tax=Burkholderia cenocepacia RepID=B1K4K0_BURCC Length = 301 Score = 93.6 bits (231), Expect = 9e-18, Method: Compositional matrix adjust. Identities = 75/308 (24%), Positives = 138/308 (44%), Gaps = 27/308 (8%) Query: 9 DLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLM 68 DLNLL +L+ ERSV KAAKR++++ SA+S++L+++R F DP+ + + L PTP Sbjct: 10 DLNLLKAFSVLVAERSVVKAAKRLHLSESAMSRTLSRVRDAFGDPILIRAGRSLIPTPRA 69 Query: 69 VSMEQNLAEWMQMSNLLLDKPHHQTPRGL--KFELAAESPLMMIMLNALSKQIYQRYPQA 126 +S+ + + + M+ +L + P L F + L + P Sbjct: 70 LSLHPRVLDMLAMAQDILTRAELVDPASLTQTFTIRCNEGFATEFGAKLLDIVTTAAPGV 129 Query: 127 TIKLRNWDYDSLDAI--TRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 ++ D A+ + ++++G G+ S P R + L D + Sbjct: 130 HLRFAMQDEKDATALREDKADIEVGVLGK-SGPEIR-----------VQTLLRDRFVGVV 177 Query: 185 RKDHP-ALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 HP A H ++D + RYPH+S+ +D +L LG +R +A ++ F +L Sbjct: 178 AMSHPLAGHDPVSIDAYTRYPHVSVSRRGRRDGPIDALLSALGAKRRVATTVSSFPVALA 237 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 +A ++A P + Q + + LP+ + V +++WH + +P Sbjct: 238 LAQ--GGSIVANVP-FRQTASGRIGMHTFELPVQTE-------PVVVSMMWHPKVDPDPA 287 Query: 304 IVWLRETI 311 WLR+ + Sbjct: 288 HRWLRDCL 295 >UniRef50_A1U8Q8 Transcriptional regulator, LysR family n=1 Tax=Marinobacter aquaeolei VT8 RepID=A1U8Q8_MARAV Length = 312 Score = 93.2 bits (230), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 84/318 (26%), Positives = 142/318 (44%), Gaps = 40/318 (12%) Query: 9 DLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLM 68 DLNLL L E++VT+A +R++++ +VS +L +LR F DPLF+ + PT Sbjct: 6 DLNLLRTFHALYLEQNVTRAGERLHLSQPSVSAALGRLRELFKDPLFIRDRQRMRPTETA 65 Query: 69 VSMEQNLAEWMQMSNLLLDKPHHQTPRGLK--FELAAESPLMMIMLNALSKQIYQRYPQA 126 + + + + L+ +P + FE+AA +++L AL+ + ++ P Sbjct: 66 DHLFPVIEAALTDLDGLITSERDFSPATEQRHFEIAANDYFEVLILPALASVLREQAPGI 125 Query: 127 TIKLRNWDYDSLDA-ITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 T+++R D +A I G D+ F GR+ P ++ EV+ + C+ + Sbjct: 126 TLQVRRLSQDMSEAGIMSGTTDLAF-GRQVDPPDNLVVR--------EVILEGIECL-VG 175 Query: 186 KDHPALHQ-----TWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEF-- 238 +HP L + D F RY H+ I + L+ +R +A+++ F Sbjct: 176 NEHPLLERLKGNGQMTRDDFERYAHVLIQPHTRLKSGIFKQLESQNLKRKVALAVTYFMA 235 Query: 239 -----EQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLL 293 E S +A+ P L CQ++ + + VA P+ FD PF L Sbjct: 236 VPALLEGSSLIASLPTGL--------CQHFRRQFAVTPVAPPVAFD-------AFPFHLS 280 Query: 294 WHKRNSHNPKIVWLRETI 311 WH R +P WLRE I Sbjct: 281 WHHRYQKDPAHRWLREQI 298 >UniRef50_A6CYZ8 Hypothetical transcriptional regulator, LysR family protein n=1 Tax=Vibrio shilonii AK1 RepID=A6CYZ8_9VIBR Length = 304 Score = 93.2 bits (230), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 85/320 (26%), Positives = 145/320 (45%), Gaps = 38/320 (11%) Query: 9 DLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTP-- 66 +LNLL L++L+ E+ V++AA+R+N+T SAVS+ L++LR + DPL V + TP Sbjct: 6 NLNLLYTLEVLLAEKHVSRAAERLNLTQSAVSRQLSQLRDIYHDPLLVRNGNHYVLTPRA 65 Query: 67 --LMVSME---QNLAEWMQMSN---LLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQ 118 L +E QN+ + + ++ LL D+ F ++ + +L L + Sbjct: 66 ERLGAELEDLFQNITKVLGQADFDPLLFDQ---------TFTFSSSDYVAQYILPELVEL 116 Query: 119 IYQRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSD 178 + P R W+ D+L ++ E+D+ + +L PL + + + D Sbjct: 117 LSSLAPTMQFAYRLWEPDNLAKLS--EIDVQLAS--------TMLPEAPLGLSSQQIGED 166 Query: 179 VPCVWLRKDHP-ALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPE 237 +P + RK+HP + +T YPHI I LD ++ +R I +S P Sbjct: 167 IPVIVTRKNHPLSGTKTITEQELGAYPHIRISGGGDKDSFLDREMKARSLKRRILVSTPF 226 Query: 238 FEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKR 297 F + + Q D LL T P + N L + +PF K + L+WH + Sbjct: 227 FSSAFALLQQTDALL--TVPLHIA-VNLKKTQKLHVIDIPFTVPTYK-----YWLIWHPK 278 Query: 298 NSHNPKIVWLRETIKNLYAS 317 H P +W RE + ++ S Sbjct: 279 YDHEPAHIWTREHVLSIMRS 298 >UniRef50_A6GJJ5 Regulatory protein, LysR:LysR, substrate-binding n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GJJ5_9DELT Length = 304 Score = 93.2 bits (230), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 78/310 (25%), Positives = 146/310 (47%), Gaps = 31/310 (10%) Query: 18 LLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSMEQNLAE 77 +L++E +VT+AA+ + ++ A+S LA+LR FDDPL + S G+ PT + + + +A Sbjct: 1 MLVREGNVTRAARALGISQPAMSHRLARLRERFDDPLLLPSGAGMQPTARALQLVEPVAR 60 Query: 78 WMQMSNLLLDKPHHQTPR--GLKFELA-AESPLMMIMLNALSKQIYQRYPQATIKLRNWD 134 + + L PR +F +A A+ +++ ALS+ ++ P+ +++ Sbjct: 61 GLLEFDAALRSEARFDPRTSTRRFTIACADFGDFVVLPRALSR-LHAEAPEIEVRMCRPG 119 Query: 135 YDSLDAITRGEVDIGFSGRESHP----RSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPA 190 + + RG +D+ G P R R +L F+ +R DHPA Sbjct: 120 PELERGLERGLIDVAVLGNPCLPAANFRQRRVLDG---------RFATT----VRADHPA 166 Query: 191 LHQTWNLDTFLRYPHISIC-WEQSD-TWALDNVLQELGRERTIAMSLPEFEQSLFMAAQP 248 + +LDTF+ PH++I +SD +D+ L +G R +A+ +P + + +A++ Sbjct: 167 VGPRMDLDTFVALPHLAIAPSSESDFGGVIDDALARVGEARRVAVRVPSYSTAPLLASRS 226 Query: 249 DNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWLR 308 D +L A + + + L + PLP S + ++WH+R P WLR Sbjct: 227 DLVLTAPVGVILEAASFV-SLRVFDPPLPIPPSDVR-------MVWHERWQREPGHAWLR 278 Query: 309 ETIKNLYASM 318 T+ + + Sbjct: 279 TTLAEVMTGL 288 >UniRef50_Q1GMN1 Transcriptional regulator, LysR family n=1 Tax=Ruegeria sp. TM1040 RepID=Q1GMN1_SILST Length = 319 Score = 92.8 bits (229), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 81/325 (24%), Positives = 141/325 (43%), Gaps = 34/325 (10%) Query: 2 KKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLG 61 +K++ +DLNLL L ERSVTKAA + ++ AVS +L +LR DD LF+ S G Sbjct: 9 QKNLNAIDLNLLKVFSALAAERSVTKAANSVGLSQPAVSHALRRLRDLMDDELFIRSTDG 68 Query: 62 LSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGLK--FELAAESPLMMIMLNALSKQI 119 + PT + + ++M + P L+ + L +++ L+ ++ Sbjct: 69 MQPTERCRELAPAIDASLKMLQDAMTVKDDNDPANLRATYRLGMNDLFSTLLVPGLTARV 128 Query: 120 YQRYPQATIKL-------RNWDYDSLDAITRGEVDIGFSGRESHPR--SRELLSSLPLAI 170 ++ P +++ +N D D+ + RG +D+ P RELL + Sbjct: 129 AKQAPNVSLRFLHSMAINQNVD-DAYSDLERGRIDLTVIQDFDTPSRFDRELLGA----- 182 Query: 171 DYEVLFSDVPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERT 230 S+ CV R HP +++ + HI ++ +D L ++G R Sbjct: 183 ------SEFVCVA-RAGHPVFQPGLSMEQYTSLGHIMFTTLDAEYSRIDEALSKMGIRRR 235 Query: 231 IAMSLPEFEQSLFMAAQPDNLLLATAPRY-CQYYNQLHQLPLVALPLPFDESQQKKLEVP 289 I + +P + +L A D L+ T PR Q+ Q L + LPF+ +K +V Sbjct: 236 IELRVPHYSAALSATALTD--LVYTVPRILAQHAEQAFGLQVS--ELPFEAPVRKIFQV- 290 Query: 290 FTLLWHKRNSHNPKIVWLRETIKNL 314 WHK + + WLR + ++ Sbjct: 291 ----WHKTRTKDFGHQWLRNVVSDV 311 >UniRef50_Q471I4 Regulatory protein, LysR:LysR, substrate-binding n=1 Tax=Ralstonia eutropha JMP134 RepID=Q471I4_RALEJ Length = 323 Score = 92.8 bits (229), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 88/317 (27%), Positives = 136/317 (42%), Gaps = 29/317 (9%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 L LN LL L +L+ ERS+TKAA+ +N+T A+SK+LA+LR +F DPLFV L + PTP Sbjct: 12 LSLNQLLVLDVLLSERSLTKAARVLNLTQPALSKTLARLRQYFGDPLFVRVGLRMEPTPK 71 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRGLK--FELAAESPLMMIMLNALSKQIYQRYPQ 125 + + + +Q L PR + F ML L ++ + P Sbjct: 72 ALELADPVRGILQSVRALRSDHVGFDPRTSQRSFSFFLLDAGASQMLPPLLSRLAEEAPG 131 Query: 126 ATIKLRNWDYDSLDA-ITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 ++ N D LD + G VD+ S P L +I ++L+ + + Sbjct: 132 ILVQAVNADATHLDIWLENGLVDLAIG---SFP-------GLTQSIRRQLLWHETYGAVV 181 Query: 185 RKDHPALHQTWNLDTFLRYPH--ISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 RKDHP L Q +LD F+ H +S +++ ++ I +P F + Sbjct: 182 RKDHPRLAQLGDLDAFVAEKHVLVSAVGTGHQHLSIERAIEAAVPHTNIICRVPSFATAG 241 Query: 243 FMAAQPDN---LLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 +A D L L A C+ + +P + LP D +Q WH R Sbjct: 242 LIAKHSDAVAVLPLTLARALCKDLDLTVVMPPLTLP-GMDIAQH----------WHDRVH 290 Query: 300 HNPKIVWLRETIKNLYA 316 P W+R + L+A Sbjct: 291 REPGNQWIRALVHRLFA 307 >UniRef50_B9Z480 Transcriptional regulator, LysR family n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z480_9NEIS Length = 303 Score = 92.8 bits (229), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 79/316 (25%), Positives = 128/316 (40%), Gaps = 22/316 (6%) Query: 7 TLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTP 66 T D+ LL + + RSVT+AA + + AVS +LAKLR FDDPLFV G+ PTP Sbjct: 3 TADVRLLQVFDEIYKTRSVTRAADNLGLGQPAVSIALAKLREHFDDPLFVRIANGMEPTP 62 Query: 67 LMVSMEQNLAEWMQMSNLLLDKPHHQTPRGLK--FELAAESPLMMIMLNALSKQIYQRYP 124 + +E + + + +L+ P + F ++ +++L L Q+ + P Sbjct: 63 MARELEHAVRQALDALDLVFGHRIDFDPASSERTFCISMTDISQLVLLPKLWAQLRKTSP 122 Query: 125 QATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 I + ++ + GE D+ + L + LF Sbjct: 123 GVHIDIVPLSAETPRMLETGEADLALG----------FMPQLEAGFYQQSLFRQRYVCVA 172 Query: 185 RKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 DHP +H L F H + + LD + G R IA+ +P + F+ Sbjct: 173 STDHPRIHDELTLAQFETEEHAVVTSSGTGHLILDREIARQGITRHIALRVPNYLGIAFV 232 Query: 245 AAQPDNLLLATAP-RYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 Q D +L T P R Q + + +P + K+ WH+R H+P Sbjct: 233 VEQTD--MLVTIPERLAQVLEGRGRFRVFPVPFELPDYAVKQ-------HWHERYHHDPG 283 Query: 304 IVWLRETIKNLYASMA 319 WLR I +L ++ A Sbjct: 284 NRWLRRVISDLLSAPA 299 >UniRef50_Q2IYM8 Transcriptional regulator, LysR family n=2 Tax=Rhodopseudomonas palustris RepID=Q2IYM8_RHOP2 Length = 317 Score = 92.8 bits (229), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 73/314 (23%), Positives = 138/314 (43%), Gaps = 27/314 (8%) Query: 4 SITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLS 63 ++ +DLNLL+ + +++ AA+++ ++ AVS +L +LR FDDPLFV + G+ Sbjct: 5 NLRNVDLNLLIVFDAVYATGNISHAARQLALSQPAVSNALTRLREHFDDPLFVRAGRGVK 64 Query: 64 PTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGLK--FELAAESPLMMIMLNALSKQIYQ 121 PT M + + E +++ D K F + PL +++ + ++I Sbjct: 65 PTLRSQQMIEPVREALRLIRQQFDGDRSLDLGSYKRTFRIVIVDPLEAMLMPTMLREISA 124 Query: 122 RYPQATIKLR-NWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 PQ TI+ R W+ + DAI G +D+ + P++ V + P Sbjct: 125 HAPQVTIESRPPWNTNVADAIIAGTLDLA-------------CYTFPVSAPGLVFKTICP 171 Query: 181 C---VWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPE 237 C + R+ HP + T + +TFL +++ E +D + G R IA + + Sbjct: 172 CDHVIVARRGHPKIGATLDAETFLSLAQVALIPELRGHTNIDRDITTRGGNRRIAYMVNK 231 Query: 238 FEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKR 297 + D L+ R+ + L + P+P + ++WH++ Sbjct: 232 VWSMPGVVGSTD-LVTVMPRRFAELMAPKFGLQIFESPIPISPQD-------YHMIWHEK 283 Query: 298 NSHNPKIVWLRETI 311 N+ +P WLR+T+ Sbjct: 284 NTDDPGHKWLRDTM 297 >UniRef50_B5ZKB2 Transcriptional regulator, LysR family n=2 Tax=Gluconacetobacter diazotrophicus PAl 5 RepID=B5ZKB2_GLUDA Length = 317 Score = 92.8 bits (229), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 88/309 (28%), Positives = 141/309 (45%), Gaps = 25/309 (8%) Query: 9 DLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLM 68 DLNLL + +L++E SVT AA+R+ V+ + +S++L++LR F D + V S + PTP Sbjct: 9 DLNLLQAMNVLVEESSVTGAAERLQVSAATMSRTLSRLRETFHDAILVQSGRHMVPTPRA 68 Query: 69 VSMEQNLAEWMQMSNLLLDKPHHQTPRGL--KFELAAESPLMMIMLNALSKQIYQRYPQA 126 + M+ +++ + + L H GL F + A ++ AL + + P Sbjct: 69 LQMQPRVSQILSAISDLYRPRHALDFTGLTPTFRIRAADVVIGSYAEALLRALRADCPDT 128 Query: 127 T-IKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 T I + D D + +G +D+ + G + R + +L +E F V +R Sbjct: 129 TLIFTAESNSDDSDFLRQGGIDL-YIGATALLRPEIMRQTL-----FESRFRGV----VR 178 Query: 186 KDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVL-QELGRERTIAMSLPEFEQSLFM 244 HP L + Y HI++ +D VL + G ERT+A+ L F +L Sbjct: 179 AGHPILLGKITPQALVAYEHIAVSRRGRRRGPIDEVLADQYGLERTVALLLTSFYAALQG 238 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLL--WHKRNSHNP 302 +Q D L+ AP L +L L PLP D LE P T+ WH R+ + Sbjct: 239 LSQTD--LILPAPDILTDAAMLDRLGLYGFPLPLD------LE-PVTIFQAWHPRHDTDQ 289 Query: 303 KIVWLRETI 311 WLR T+ Sbjct: 290 VHQWLRRTV 298 >UniRef50_B1MJW3 Putative transcriptional regulator, LysR family n=1 Tax=Mycobacterium abscessus ATCC 19977 RepID=B1MJW3_MYCA9 Length = 295 Score = 92.4 bits (228), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 83/322 (25%), Positives = 136/322 (42%), Gaps = 40/322 (12%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +DLNLL L L+QE SVT AA+R+ +P AVS+SL +LR D L V + GL PTP Sbjct: 1 MDLNLLRVLDALLQENSVTAAAERLATSPPAVSRSLGRLRRITGDALLVRAGQGLVPTPR 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRGLK--FELAAESPLMMIMLNALSKQIYQRYPQ 125 V + L ++ ++ +L P L+ F + A + + L +++ P Sbjct: 61 AVQIRDELGGLLRRADQILRPGAEFDPGKLQRTFIVQAAELFLTALAVPLLERLRHDAPG 120 Query: 126 ATIKLRNWDYDSLDAITRGEVDIGFSGRESH--PRSRELLSSLPLAIDYEVLFSDVPCVW 183 + + A+ RG++DI G H P +R P+A+ +P V Sbjct: 121 VNVVFAPEAREDTGALRRGDIDIEL-GSLDHLDPETRH----TPVAM--------LPMVG 167 Query: 184 L-RKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 + +DHP + TF Y HIS+ +D L G R + + +P ++ Sbjct: 168 VAAQDHPLFEGPIDAGTFATYGHISVSRRGKLYGPIDEALARHGLRRRVPVVVPSHTSAM 227 Query: 243 FMAAQPDNLLLA------TAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHK 296 +A + L TA + ++ +LP VA+ + WH Sbjct: 228 LLARSSRLIALTVAGSVDTAGLGIRMFDIPLELPAVAV----------------GVAWHP 271 Query: 297 RNSHNPKIVWLRETIKNLYASM 318 RN+ + WLR + +A + Sbjct: 272 RNNDDAAHTWLRGLLIESFARL 293 >UniRef50_D0RY94 Transcriptional regulator n=4 Tax=Acinetobacter RepID=D0RY94_ACICA Length = 311 Score = 92.4 bits (228), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 80/310 (25%), Positives = 146/310 (47%), Gaps = 23/310 (7%) Query: 4 SITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLS 63 S+ +DLNL + +E+++T+A++++ ++ AVS +LA+LR F+DPLF+ G+ Sbjct: 10 SLARIDLNLFRVFVTIYKEKNLTRASEQLFLSQPAVSHALARLRDHFNDPLFIRDGHGVV 69 Query: 64 PTPLMVSMEQNLAEWMQMSNLLLDKPHHQTP-RGLK-FELAAESPLMMIMLNALSKQIYQ 121 P+PL + + + +Q+ + + + P R LK +A I L ++ + + Q Sbjct: 70 PSPLAKRLWPKIEQSLQLMHQAIQSTYDFVPARDLKHLTIAMNDEYEGIFLPSIIQHLTQ 129 Query: 122 RYPQATIKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 P + D +L ++ G++D ++ S+ +I YE D Sbjct: 130 FNPNLQLNSVRIDRKNLRHELSTGKIDFAI----------DVQHSVEDSIGYECCTKDQF 179 Query: 181 CVWLRKDHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFE 239 V RK HP L T + +L HI++ + D L + G +RTI+ ++E Sbjct: 180 VVISRKQHPLLSSTDLTKEIYLDAKHITVSSRPTGRVFEDFFLSKQGIKRTISFRCQQYE 239 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVAL-PLPFDESQQKKLEVPFTLLWHKRN 298 ++ + Q D+LL T P+ CQ P + + PLP D + + L W ++ Sbjct: 240 TAIRLITQTDHLL--TIPQ-CQIAYFKDNYPQIKVHPLPIDIAGYQ-----MNLYWDQQK 291 Query: 299 SHNPKIVWLR 308 SH +IVW + Sbjct: 292 SHEHQIVWCK 301 >UniRef50_Q4KKE5 Transcriptional regulator, LysR family n=27 Tax=Proteobacteria RepID=Q4KKE5_PSEF5 Length = 308 Score = 92.0 bits (227), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 78/312 (25%), Positives = 139/312 (44%), Gaps = 29/312 (9%) Query: 9 DLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLM 68 D+NLL+ L L+ E SV AA+R+N++P+A+S++L ++R DP+ V + GL PTP Sbjct: 5 DMNLLVALDALLDEGSVVGAARRMNLSPAAMSRTLTRIRDALGDPVLVRAGRGLVPTPKA 64 Query: 69 VSMEQNLAEWMQMSNLLLDKPHHQTPRGL--KFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + + + ++ + L+ L +F + A + + L + ++ P Sbjct: 65 LELRSQVRDVVEQAALVFRSADKVDLGSLQRRFNVRANDFFVGVYGGRLIDTLERQAPLC 124 Query: 127 TIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEV--LFSDVPCVWL 184 ++ +A+ G +D+ S ++ PL + +V LF+ + Sbjct: 125 ELRFVPEGDGDDEALREGRIDLRIS------------NTRPLTPEVKVQNLFTTAFVGLV 172 Query: 185 RKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 R+ HP L + + F +PHIS+ +D L E G ER + + P F ++FM Sbjct: 173 REGHPLLDEDITAERFAAFPHISMSRRGIARGPIDAALAEQGLERRVPLIAPSFHAAMFM 232 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVP---FTLLWHKRNSHN 301 PD+ L+ P+ L L + LP + +P T WH R + Sbjct: 233 L--PDSDLILPVPQETLLSVSRLGLRLRSFVLP--------ISLPTLVLTQAWHPRYDKD 282 Query: 302 PKIVWLRETIKN 313 P W RET++ Sbjct: 283 PAHKWFRETLRT 294 >UniRef50_A8GG55 Transcriptional regulator, LysR family n=1 Tax=Serratia proteamaculans 568 RepID=A8GG55_SERP5 Length = 310 Score = 92.0 bits (227), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 84/322 (26%), Positives = 145/322 (45%), Gaps = 31/322 (9%) Query: 4 SITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLS 63 +++ +DLNLL+ + L Q R+VT A +R+N +VS +LA+LR FDDPLFV S G+ Sbjct: 2 NLSNVDLNLLVVFEALYQTRNVTVAGQRLNRAQPSVSNALARLRTLFDDPLFVRSGGGML 61 Query: 64 PTP----LMVSMEQNLAEWMQMSNLLLDKPHHQTPRGL---KFELAAESPLMMIMLNALS 116 PT LM+ ++ L + Q L P P +F LAA + +L + Sbjct: 62 PTARAHQLMLQIQPVLEQIHQA----LTPPTRFDPATASQRRFRLAAGDYADITLLPTII 117 Query: 117 KQIYQRYPQATIKLRNWDYDS-LDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVL 175 ++ Q P I++ D + + + RGE+D+ G +P + + L Sbjct: 118 SRLRQAAPGIDIRVSRLDRRTVVQQLERGEIDVALGGH----------LEVPEGMLVQPL 167 Query: 176 FSDVPCVWLRKDHPAL-HQTWNLDTFLRYPHI--SICWEQSDTWALDNVLQELGRERTIA 232 F++ + HP + ++WNL ++ PH + + S +D L E+G ER +A Sbjct: 168 FNESFTCIASRHHPQIAAESWNLQQYIGLPHALYAPSDDGSARGIIDQRLTEMGLERRVA 227 Query: 233 MSLPEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTL 292 + + A D L+ A + + ++ LPLP S+ P Sbjct: 228 ATFSHIIALPAVVAGSD-LIATLATSVARQFADPSRIQF--LPLP---SELAMPAFPIEC 281 Query: 293 LWHKRNSHNPKIVWLRETIKNL 314 + ++ +P + WL +T+ L Sbjct: 282 VAGRQVKRDPALAWLCDTLSQL 303 >UniRef50_A8IJ97 Putative transcriptional regulator n=1 Tax=Azorhizobium caulinodans ORS 571 RepID=A8IJ97_AZOC5 Length = 324 Score = 92.0 bits (227), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 85/320 (26%), Positives = 132/320 (41%), Gaps = 27/320 (8%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 I D LLL + LM T AA+R+ +T S VS +L +LR DPLF P GL+P Sbjct: 8 IRRFDGALLLVFRELMATGQTTAAARRLGLTQSTVSHALRRLRDLTGDPLFQRRPDGLTP 67 Query: 65 TPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQIYQR 122 TP + + E +++S L +P P F +A + ++ L+ + Q Sbjct: 68 TPRAHELLPIVVEMLRLSQALKGEPGEFDPAASTRHFRIAGPDIVSTVLAGPLAHRFAQH 127 Query: 123 YPQATIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPC 181 P A + +L+A+ RGE+D+ H S+P L+ + Sbjct: 128 APNARLSFGFIVGAAALEALRRGEIDMAI----GH------FPSVPRGFAASTLWEEEFV 177 Query: 182 VWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQS 241 RK HP +L +L H+ + + T +D VLQ LG R + S P F S Sbjct: 178 AIARKGHPRF-PPLDLAGYLAADHVLVSFSGRFTGVVDRVLQPLGLARRVVASFPLF-LS 235 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 +F A + + A C+ + + L LP+P + VP + R + Sbjct: 236 VFDAVAQSDAVAAVPYSLCERHAE--TFGLARLPMP--------IAVPGFPIVSVRRAGV 285 Query: 302 P--KIVWLRETIKNLYASMA 319 P WL I+ + A A Sbjct: 286 PDGGYEWLEALIRRMVAEYA 305 >UniRef50_Q7MNI1 Transcriptional regulator n=5 Tax=Gammaproteobacteria RepID=Q7MNI1_VIBVY Length = 315 Score = 92.0 bits (227), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 87/315 (27%), Positives = 141/315 (44%), Gaps = 28/315 (8%) Query: 7 TLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTP 66 +LDLNLL +L QE+++ KA+KR+ V+ A+S++L KLR F D LFV P GL TP Sbjct: 8 SLDLNLLRTFMVLYQEKNMRKASKRLFVSQPAISQALQKLRHHFGDELFVKVPTGLEATP 67 Query: 67 LMVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELA-AESPLMMIMLNA-LSKQIYQRYP 124 ++ + + L++ + P L + A SP++M L L Q + P Sbjct: 68 FTETVLTAITPHLDGLASALNQTYEFNPIELSGHIKIALSPIVMASLTGTLFTQFLTQAP 127 Query: 125 QATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 TI+L W+ D+ I +G +D G + L ++P I + L + + Sbjct: 128 NCTIELVGWNKDTFTNIQQGTIDFGVN----------LEQNIPQNISCKKLVELTGKLIV 177 Query: 185 RKDHPALHQTWNLDTFLRYPHISIC---WEQSDTWALDNVLQELGRERTIAMSLPEFEQS 241 R+DHP QT YP SI W + T A ++++ G T+ E + Sbjct: 178 RRDHPIDKQTVTAKDLEPYPIASIITPGWNDNFTHAAQ-LMEKEGATPTVGFR-SEIILA 235 Query: 242 LFMAAQPDNLLLATAPRY--CQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 + Q N + + + QY N L L ++ PF + F+ +H RN Sbjct: 236 VIDIVQHTNYFMPHSNLFPLAQYPN-LRALNILVSGQPF-------MHGVFS-YYHSRNR 286 Query: 300 HNPKIVWLRETIKNL 314 +NP + W+ I + Sbjct: 287 NNPLMHWIHHEINTV 301 >UniRef50_A6CVD4 Transcriptional regulator, LysR family protein n=1 Tax=Vibrio shilonii AK1 RepID=A6CVD4_9VIBR Length = 325 Score = 92.0 bits (227), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 77/318 (24%), Positives = 144/318 (45%), Gaps = 21/318 (6%) Query: 2 KKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLG 61 K LDLNLL ++L +E+++ KAA+R+ V+ AVS+SL KLR FDDPLFV G Sbjct: 3 KDRFANLDLNLLRVFKVLYEEKNMRKAAERLYVSQPAVSQSLQKLRHQFDDPLFVKVKSG 62 Query: 62 LSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGL--KFELAAESPLMMIMLNALSKQI 119 L+PTP + +L + +++ P L +A S + + L + Sbjct: 63 LAPTPFSEQLSSSLLPLLYDIENVVNDSDVFDPAQLDQDITIALSSSFVFSISGELYRYF 122 Query: 120 YQRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 + P I + +W+ ++ AI +GE+ +G + EL S P ++ + Sbjct: 123 REHAPGLRIHIASWNDQTVTAIEKGEILLGINA--------ELTDSYPF-MEKRTIGEIN 173 Query: 180 PCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNV--LQELGRERTIAMSLPE 237 C+ +RK+HP + +++ +YP + + V + LG + S E Sbjct: 174 ACLLVRKEHPITKKKVTVESMSKYPLARLIVSNYSKYTSPTVEIFKRLGYPLEVGFS-SE 232 Query: 238 FEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKR 297 + +L Q ++ + T + +H P + + P + + + P +H R Sbjct: 233 YPVALIDVVQQSDMFMGTTNCF-----PIHNYPNLVMLSP--DQVLPEAQYPALSYFHSR 285 Query: 298 NSHNPKIVWLRETIKNLY 315 + ++ + WL E+I +++ Sbjct: 286 HQNSALVNWLNESIIHIF 303 >UniRef50_Q2SHJ0 Transcriptional regulator n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SHJ0_HAHCH Length = 291 Score = 91.7 bits (226), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 79/319 (24%), Positives = 146/319 (45%), Gaps = 34/319 (10%) Query: 4 SITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLS 63 ++ +DLNLL+ L L+ ER VT+AAKR++++ A S +L + R F DPL + + Sbjct: 2 NLRGVDLNLLVILDALLDERHVTRAAKRLHLSQPATSSALERCRHLFGDPLLIRGRGEMR 61 Query: 64 PTPLMVSMEQNLAEWMQMSNLLL---DKPHHQTPRGLKFELAAESPLMMIMLNALSKQIY 120 + S+ + + + + ++ D P + + ++ L A+ P+ +L L +++ Sbjct: 62 LSAKAESLREPIKALLTQAERVINQADTPLAELRQTIRI-LMADFPVSA-LLGPLHQRLI 119 Query: 121 QRYPQATIKLRNWD--YDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSD 178 P + ++ W +L+ + +GE D+ S + S + E+L+ D Sbjct: 120 TSAPNLDLIVQPWHGAKSALEQLAKGEADLAVSVFPNVGASFRCV---------ELLYED 170 Query: 179 VPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEF 238 CV +RKDHPA Q +NL +L YPH+ + +D LQ G R + + +P F Sbjct: 171 Y-CVLMRKDHPAA-QNFNLQQWLAYPHVLVSGRGDADSPVDQTLQARGLRRRVGLVVPYF 228 Query: 239 EQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRN 298 + + PD L+A P +C + + + P+P + P L WH R Sbjct: 229 QMA------PD--LIALLPTHCVPQDTT-KFTVFPPPIPVE-------GFPLHLAWHVRK 272 Query: 299 SHNPKIVWLRETIKNLYAS 317 + + + E I+ + Sbjct: 273 HGDQAVSHVVEVIREVTGG 291 >UniRef50_B1J7P4 Transcriptional regulator, LysR family n=5 Tax=Pseudomonas RepID=B1J7P4_PSEPW Length = 314 Score = 91.3 bits (225), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 82/318 (25%), Positives = 141/318 (44%), Gaps = 22/318 (6%) Query: 1 MKKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPL 60 M + +L L L L L+Q ++++ AA+R+ V+ SA+S+ LA LR FDDPL V Sbjct: 1 MNPTFASLSLAHLRTLDCLLQLKNLSHAAERLGVSQSALSRQLAHLREAFDDPLLVRQGR 60 Query: 61 GLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNALSKQI 119 G + ++ + L + ++ L R +F LAA + ML L + Sbjct: 61 GYVLSEYGQALVEPLRQVLEELQALRQPAAFDPARCERRFCLAASDYVAEHMLPLLVAAL 120 Query: 120 YQRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 Q P +I R W + GE+D+ + L P + +L D Sbjct: 121 EQEAPGVSIDYRTWQAGQYALLASGEIDLATT----------LFDESPANLHGRLLGEDR 170 Query: 180 PCVWLRKDHP-ALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEF 238 +R+DHP + + D +L + H+ I +D L+ G +R I++ +P F Sbjct: 171 AVCLMRRDHPLTACEVLSQDDYLAFKHVRISGGGDKDSFIDRHLRTQGLQRRISLEVPFF 230 Query: 239 EQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVA-LPLPFDESQQKKLEVPFTLLWHKR 297 ++ + ++ LAT P + QL +L +A PL F E Q+ + ++WH+R Sbjct: 231 SATVQVVG--NSQALATVPEHIA--RQLCRLHGLAWRPLGFVEHTQR-----YWVVWHQR 281 Query: 298 NSHNPKIVWLRETIKNLY 315 + + WLR + L+ Sbjct: 282 LQASAEHRWLRNRVFELW 299 >UniRef50_Q1LD16 Transcriptional regulator, LysR family n=8 Tax=Proteobacteria RepID=Q1LD16_RALME Length = 315 Score = 91.3 bits (225), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 96/337 (28%), Positives = 146/337 (43%), Gaps = 65/337 (19%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +DLNLL+ L L+ ER+VT A+R+ +T AVS LA+LR FDDPL + + G Sbjct: 15 VDLNLLVTLDALLDERNVTHTAERLGLTQPAVSAQLARLRRIFDDPLLIPADTGRG---- 70 Query: 68 MVSMEQNLA--EWMQMSNLLLDKPHHQTPR------GLKFELAAE----SPLMMIMLNAL 115 M++ + LA E + ++ L+ H+ P +F +AA S L M +L L Sbjct: 71 MIASARALALLEPLHVALKDLESVVHRRPEFDPFVDTRQFVIAASDNATSTLGMSLLERL 130 Query: 116 SKQIYQRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHP---RSRELLSSLPLAIDY 172 S A + R + + + GEVD+ P R+R+LL Sbjct: 131 SIVAGTGVRVAFVHGRQAEIAA--QLESGEVDLLIGSERMVPPTMRARKLL--------- 179 Query: 173 EVLFSDVPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWA-LDNVLQELGRERTI 231 + + RK HP + LD + + H+ + + +D LQ LGR R + Sbjct: 180 ----DETFVMAQRKSHPRGARRLTLDMYCKLRHVLVSTSGGSFFGFVDEQLQLLGRSRDV 235 Query: 232 AMSLPEF-------EQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQK 284 A+S+ F +S ++ P L A RY + + A LPFD Sbjct: 236 AVSVQAFTVVPDLLRRSDYVCTMPARL----AARYADWLD--------AFALPFD----- 278 Query: 285 KLEVP-FTL--LWHKRNSHNPKIVWLRETIKNLYASM 318 VP F+L WH RN +P I WLR T+ + + Sbjct: 279 ---VPGFSLSAAWHPRNHADPAIAWLRSTLAEVAGQL 312 >UniRef50_B3QAJ4 Transcriptional regulator, LysR family n=4 Tax=Alphaproteobacteria RepID=B3QAJ4_RHOPT Length = 316 Score = 91.3 bits (225), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 80/320 (25%), Positives = 147/320 (45%), Gaps = 30/320 (9%) Query: 4 SITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLS 63 ++ LDLNLL L+ L++ R+VT AA+ + ++ A+S++L++LR+ DPL V GL Sbjct: 5 NLAGLDLNLLPPLEALLRRRNVTHAAQDVGLSQPAMSRALSRLRSLLADPLLVRGHHGLV 64 Query: 64 PTPLMVSMEQNLAEWM-QMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQR 122 TP ++ L+ + + +L ++ +AA +++ L ++ + Sbjct: 65 LTPKAQALVPLLSVAVADLKDLFRERRFDPATEQRTIRIAASDNQTVLLAPPLMARLARE 124 Query: 123 YPQATIKLRNWDYDSLDAITRGEVDIGFSGRESH--PRSRELLSSLPLAIDYEVLFSDVP 180 P ++ + D + + G +D F+ + P + S+P+A D L Sbjct: 125 APGIDLRFELYRADLRERMESGALDFAFALATTDLPPGA----VSMPIADDRLALV---- 176 Query: 181 CVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQ 240 +R+ HP +TW + + H+ I LD +L R +A+ P F Sbjct: 177 ---MRRGHPKAKRTWRISDYADVDHVGIALLDDGRSELDGILAAARVSRRVALVTPHFTA 233 Query: 241 SLFMAAQPD---NLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLW-HK 296 +L A D + A A R+ ++ + + P PFD K+E+P TL+W H Sbjct: 234 ALATVAATDMVTTISRALARRFAGAFDLIVKQP------PFD-----KVELPMTLVWSHL 282 Query: 297 RNSHNPKIVWLRETIKNLYA 316 RN+ +P +VW RE ++ + Sbjct: 283 RNA-DPLLVWFRELLREIAG 301 >UniRef50_A0R6U4 Transcriptional regulator, LysR family protein n=1 Tax=Mycobacterium smegmatis str. MC2 155 RepID=A0R6U4_MYCS2 Length = 297 Score = 90.9 bits (224), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 90/320 (28%), Positives = 147/320 (45%), Gaps = 30/320 (9%) Query: 2 KKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLG 61 + I +DLNLL L L++ER V++AA R+ ++ A+S++L +LR FDD L V G Sbjct: 3 QTHIGGVDLNLLPALAALLEERQVSRAAARVGLSQPAMSRALQRLRRTFDDALLVAGRDG 62 Query: 62 LSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNA-LSKQIY 120 + TP ++ LA M ++L + + + A S + + A L++ I+ Sbjct: 63 YTLTPRAERLQARLAGLMPELDVLFGPENFEPGTATESYRLALSDYSVALFGADLARTIH 122 Query: 121 QRYPQATIKLRNWDYDSLDAITRGEVDIGFSGR--ESHPRSRELLSSLPLAIDYEVLFSD 178 QR P +++ + D ++ + G +D+ GR SH RE LF+D Sbjct: 123 QRSPGSSVVYQQLDDEAFAELNAGGIDLLVVGRPAASHLAHRE-------------LFTD 169 Query: 179 VPCVWLRKDHP-ALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPE 237 + +HP A L +L YPHI I EQ T +++ L R +A+S P Sbjct: 170 HFVCAVAHEHPLAARPQVTLQDYLAYPHIRIEIEQGTTHLIEDALPV---PRKVAVSTPF 226 Query: 238 FEQSLFMAAQPDNLLLATAP-RYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHK 296 + ++ M A D L+ T P R + ++ P F ++PF +WH Sbjct: 227 YTFAVDMLAGTD--LVVTFPARLVAKLANPSAVRILDAPKSFP-------QLPFYAVWHP 277 Query: 297 RNSHNPKIVWLRETIKNLYA 316 R H+ +WLR T+ L A Sbjct: 278 RLDHDASHLWLRSTLYELTA 297 >UniRef50_A5VCH0 Transcriptional regulator, LysR family n=1 Tax=Sphingomonas wittichii RW1 RepID=A5VCH0_SPHWW Length = 327 Score = 90.9 bits (224), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 94/336 (27%), Positives = 149/336 (44%), Gaps = 54/336 (16%) Query: 7 TLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTP 66 +LDLNLL L +E SVT AA + +TPSAVS SL +LR D LF+ G++PTP Sbjct: 8 SLDLNLLRVFDALTEEGSVTGAAGLLGLTPSAVSHSLNRLRHILKDDLFLRGAKGMNPTP 67 Query: 67 ----LMVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQR 122 L V + + L + Q N P +T R +F +A + +++ + + + Sbjct: 68 KALALAVPIRRALVDIQQALNGDSFVP-EKTDR--RFSIACGDYVTAVLMPEVIARFRKA 124 Query: 123 YPQATIKLR--NWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 P A ++++ LDA G +D+ G E P E L+S P LF+D Sbjct: 125 APLAELRIQPVGAVMKELDA---GRIDLAMGGFERIP---ERLASEP-------LFAD-D 170 Query: 181 CVW-LRKDHPALHQTWNLDTFLRYPHISICWEQSDTWA--------------------LD 219 VW +R D P ++ L+ PH++I +D LD Sbjct: 171 MVWVMRADSPFANRQPTLEGLAALPHLAIASPDNDRAVSGIVSDAGLERRVVRDDPRILD 230 Query: 220 NVLQELGRERTIAMSLPEFEQSLFMAAQPDNLLLATAPR-YCQYYNQLHQLPLVALPLPF 278 +E G RT+AM+ P ++ + A+ D L A PR + + ++L L P P Sbjct: 231 QYFEERGLRRTVAMTAPNPIVAMAIVAECD--LAAMMPRNLAEAFADRYKLALWKPPHPS 288 Query: 279 DESQQKKLEVPFTLLWHKRNSHNPKIVWLRETIKNL 314 Q + +WH+ + P + WLR I+++ Sbjct: 289 ALFQ-------ISTVWHRWHGDQPAVDWLRAMIRSV 317 >UniRef50_A5V8P8 Transcriptional regulator, LysR family n=1 Tax=Sphingomonas wittichii RW1 RepID=A5V8P8_SPHWW Length = 316 Score = 90.9 bits (224), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 86/323 (26%), Positives = 141/323 (43%), Gaps = 18/323 (5%) Query: 1 MKKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPL 60 M S+T DLNLL+ L L+ E+SVT+AA+R+ VT AVS SLA+LR F+DPL V Sbjct: 1 MALSLTQFDLNLLVVLDALLTEKSVTRAAERLFVTQPAVSGSLARLRDIFEDPLLVRVGR 60 Query: 61 GLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGLK--FELAAESPLMMIMLNALSKQ 118 + T ++ + E + M L P K F +A M +L + ++ Sbjct: 61 EMELTVRARALAGPVREALLMVKAALGSEESFDPAETKCEFRIAMTDYCSMTILPRIVRE 120 Query: 119 IYQRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSD 178 + R P + + S D + GE+D + E R+ + S P + F D Sbjct: 121 LSARAPGIELAVEGLVNKSFDRLETGEIDFLLTVVE---RTLLMHSRHPDMLRGADAFED 177 Query: 179 VPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGR-ERTIAMSLPE 237 + DHP + F YP+ ++ + + +T+ D E G +++ A+ P Sbjct: 178 CYTCVVAADHP-FDGALTPEDFRAYPNATVSFGE-NTFTTDRAAYEHGGLDQSPALIAPS 235 Query: 238 FEQSLFMAAQPDNLLLATAP-RYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHK 296 F LF L+ T P R + + + + L+ P+ ++ L WH Sbjct: 236 FSSLLFQLQ--GTTLIGTVPNRLAEMFAPMLGVRLLEPPIRLPTLTER-------LNWHV 286 Query: 297 RNSHNPKIVWLRETIKNLYASMA 319 R+ +P W+R I ++ SM Sbjct: 287 RSDADPGHSWMRNLILDVGRSMG 309 >UniRef50_Q0BPL7 Transcriptional regulators, LysR family n=1 Tax=Granulibacter bethesdensis CGDNIH1 RepID=Q0BPL7_GRABC Length = 308 Score = 90.5 bits (223), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 100/336 (29%), Positives = 143/336 (42%), Gaps = 51/336 (15%) Query: 1 MKKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPL 60 + ++++ LDLNLL + ERSVTKAA+ I V SA+S +LA+LR D LFV +P Sbjct: 4 VHRNLSRLDLNLLTAFDAIYTERSVTKAAECIGVGQSAMSHNLARLREALQDELFVRTPS 63 Query: 61 GLSPTPLMVSMEQNLAE--WMQMSNLLLDKPHHQTP----RGLKFELA--AESPLMMIML 112 G+ PTP ++ + W LL + TP R + LA ES LM +L Sbjct: 64 GMEPTPRARAIADTVRNLLWTVQDKLLTTRSF--TPATAERIWRIGLADNIESLLMPPLL 121 Query: 113 NALSKQIYQRYPQA--TIKLRNWDYDSLDAITRGEVDIGFS----GRESHPRSRELLSSL 166 + + K+ QA T LR L+A+ R E+D+G G H R Sbjct: 122 DMMLKEAPGMRIQAIFTDGLR-----VLEALDRDELDMGIGVFRHGGNVHKRRN------ 170 Query: 167 PLAIDYEVLFSDVPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELG 226 A D + D + L LD + PH+ + D+ L LG Sbjct: 171 -FAPDSYLCLYDPKQI-------TLEGPITLDQYASLPHVLVSLRGIFHGVADDALSLLG 222 Query: 227 RERTIAMSLPEFEQSLFM--AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQK 284 R RTI M+ P F ++ A L T R + L PLPF+ + Sbjct: 223 RTRTIVMTTPHFLSVPYVLRGAPVITTLPGTLARSAASAHG-----LCVSPLPFELA--- 274 Query: 285 KLEVPF--TLLWHKRNSHNPKIVWLRETIKNLYASM 318 PF ++LWH ++P WLR T+ +L M Sbjct: 275 ----PFRLSMLWHSSYDNDPAHRWLRNTVASLMDQM 306 >UniRef50_B5F9Z3 Transcriptional regulator, LysR family n=3 Tax=Vibrionales RepID=B5F9Z3_VIBFM Length = 309 Score = 90.5 bits (223), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 80/319 (25%), Positives = 140/319 (43%), Gaps = 25/319 (7%) Query: 2 KKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLG 61 K TLDLNLL +L QE ++ KA++R+ V+ A+S++L KLR F+D LF+ G Sbjct: 3 KDLFATLDLNLLRTFLILSQELNMRKASERLFVSQPAISQALQKLRNHFNDELFIKVRHG 62 Query: 62 LSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGLK--FELAAESPLMMIMLNALSKQI 119 L PTP + +N+ ++ + +L+ P L ++A ++ + AL I Sbjct: 63 LKPTPFAEELAENIQPYLDGLSSVLNASQEFKPENLNKTIKIALAPQVLTCLSGALFHDI 122 Query: 120 YQRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 ++ P ++L NW + D + +G++D+ + E +ELLS + L + Sbjct: 123 KEKAPNVDLQLVNWSESTFDDLAKGKLDLAIN-YEYDKVPKELLS--------KNLITIT 173 Query: 180 PCVWLRKDHPALHQTWNLDTFLRYPHISIC---WEQSDTWALDNVLQELGRERTIAMSLP 236 CV +R +HP F Y S+ W + + A VL + E I Sbjct: 174 GCVIVRINHPIEKTVATPYDFEGYELASLIIPGWNDNKSLA-SEVLTNMDIEHKIGFR-S 231 Query: 237 EFEQSLFMAAQPDNLLLATAPRY-CQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWH 295 E +L Q ++ + + Y+ L ++ L +P L P +H Sbjct: 232 ELPMALIDVIQHTDMYFPSTSLFPIHQYSSLRRIDLSLDDVP--------LNYPIYTYYH 283 Query: 296 KRNSHNPKIVWLRETIKNL 314 +R+ N W+ + I +L Sbjct: 284 QRHKKNALHAWINQLITDL 302 >UniRef50_Q2CCM2 Transcriptional regulator, LysR family protein n=1 Tax=Oceanicola granulosus HTCC2516 RepID=Q2CCM2_9RHOB Length = 313 Score = 90.1 bits (222), Expect = 8e-17, Method: Compositional matrix adjust. Identities = 93/323 (28%), Positives = 140/323 (43%), Gaps = 34/323 (10%) Query: 4 SITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLS 63 ++ DLNLL L L++ERS T+AA R+ ++ AVS +L +LRA D LF+ GL Sbjct: 2 NLAGFDLNLLKVLDALLRERSTTRAAARVGLSQPAVSAALGRLRAALGDELFLRRGQGLV 61 Query: 64 PTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGLK--FELAAESPLMMIMLNALSKQIYQ 121 T ++E L E + LL P P K F LA +++ L+ ++ Sbjct: 62 ATDFARALEAPLRETLDRLEDLLAAPQEFDPATAKRTFRLAGIDFFAEMLMPQLAARLAA 121 Query: 122 RYPQATIKLRNW---DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSD 178 P I+L N +Y++ + R E D+ P L+ P ++ +LF Sbjct: 122 AAPGVRIQLLNLVPREYEA--TLERYEADVAL-----FP-----LTGSPEWAEHRLLFRS 169 Query: 179 VPCVWL------RKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIA 232 P V R H A T LD F HI + + D+ L +GR+R + Sbjct: 170 -PFVLAAAAGNPRLAHLAEGDTVPLDLFCDLGHILFSLDGNLRAMGDDALAAVGRQRRVV 228 Query: 233 MSLPEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVP-FT 291 MS+ F L A + + L + ++ L ALP+P LE P Sbjct: 229 MSMASFPGILRAVAGSEAVSLVPVQLARKLQGEMG-LRCFALPMP--------LEPPVIG 279 Query: 292 LLWHKRNSHNPKIVWLRETIKNL 314 ++WH+R+S P WLRE I L Sbjct: 280 MMWHRRSSATPAHAWLREQIVEL 302 >UniRef50_A3YHF6 Transcriptional regulatory protein n=2 Tax=Gammaproteobacteria RepID=A3YHF6_9GAMM Length = 308 Score = 90.1 bits (222), Expect = 8e-17, Method: Compositional matrix adjust. Identities = 78/314 (24%), Positives = 140/314 (44%), Gaps = 27/314 (8%) Query: 9 DLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLM 68 DLNL++ +M+E+S+T AA + +T +VS +++++R + DPLFV G+ PTP Sbjct: 5 DLNLVVIFDAIMKEKSITSAADSLAMTQPSVSNAVSRMRHAWKDPLFVKEGRGIRPTPYA 64 Query: 69 VSMEQNLAEWMQMSNLLLDKPHHQTPRGLK--FELAAESPLMMIMLNALSKQIYQRYPQA 126 + + +AE + N + P + P K F + I+ L I Q P Sbjct: 65 TKLWKRVAEPLAQINHAI-APEYFDPLTSKASFRIGITDGSASIVWPELRHIIEQEAPNI 123 Query: 127 TIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRK 186 I + D + +VD+ F + + S E+ Y+ ++ + +R Sbjct: 124 NIYAVPYKVDGELLLNNADVDLVFDYYDGN--SDEIF--------YKSMYENQFVTVMRA 173 Query: 187 DHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAA 246 DH ++ L+ +++ H+ + +D+ L EL +R AM++ F ++ + Sbjct: 174 DHELANEELTLERYIKSEHLLVSLSGDVCGIVDDKLAELNAKRRTAMTVNSFASAINLIK 233 Query: 247 QPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVP---FTLLWHKRNSHNPK 303 Q L+ T P Y L LV P+P LE+P +L WH RN+H+ Sbjct: 234 Q--TRLIITMP-YPIIAEHLAAGDLVLKPVP--------LELPSIKISLAWHSRNNHSQA 282 Query: 304 IVWLRETIKNLYAS 317 + WL + + + S Sbjct: 283 LKWLIKVLDRIIDS 296 >UniRef50_P52679 PCP degradation transcriptional activation protein n=1 Tax=Sphingobium chlorophenolicum RepID=PCPR_SPHCR Length = 307 Score = 90.1 bits (222), Expect = 8e-17, Method: Compositional matrix adjust. Identities = 79/318 (24%), Positives = 134/318 (42%), Gaps = 31/318 (9%) Query: 6 TTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPT 65 + L L L+ L + S KAA +++ +S+ LA+LR FDDPLFV + G+ PT Sbjct: 4 SVLPLGHLMVFDALYRHGSAGKAAHALSMPQPTLSRWLAQLRTHFDDPLFVRTRSGMEPT 63 Query: 66 PLMVSMEQNLAEWMQM------SNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQI 119 PL ++AE + + S L D F +AA +ML L + Sbjct: 64 PLAARAAPHIAEMIAIYRQHVRSELRFDP----GTSNRNFRIAASDFGQALMLPRLYATL 119 Query: 120 YQRYPQATIKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSD 178 + PQ + N + L + + G +DI F G +L I + LF + Sbjct: 120 EETAPQVRVTGVNLRHGPLVEELESGSIDIAFGG----------FPTLSAGIKTQTLFRE 169 Query: 179 VPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTW--ALDNVLQELGRERTIAMSLP 236 +R+ HPAL +L+ F + HI + + + ++ L EL +I + Sbjct: 170 EYVCVMRQSHPALTHGLDLEAFRQCRHIIVTAHEFNHVHEQVEARLLELLPPESIRFTTE 229 Query: 237 EFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHK 296 F S +A + D ++L R +++ L + +P+ + K+ WH+ Sbjct: 230 NFLVSAVIAEETD-VILTIPSRLARWFANRGGLTIFPVPIELPSIEVKQ-------YWHE 281 Query: 297 RNSHNPKIVWLRETIKNL 314 R +P +WLR I + Sbjct: 282 RYDKDPGNIWLRRVIAKI 299 >UniRef50_D1TCI7 LysR family transcriptional regulator n=2 Tax=Burkholderia RepID=D1TCI7_9BURK Length = 329 Score = 90.1 bits (222), Expect = 9e-17, Method: Compositional matrix adjust. Identities = 81/317 (25%), Positives = 142/317 (44%), Gaps = 28/317 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 DLNLL+ + L++ERSVT+AA+R+ + AVS +L +LR F D LFV +P G++PTP Sbjct: 25 FDLNLLVTFRALLEERSVTRAAQRLLLGQPAVSGALKRLRETFGDELFVRTPQGMTPTPR 84 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRGLK--FELAAESPLMMIMLNALSKQIYQRYPQ 125 + + + + ++Q + L +P P + F + L ++++ + ++ P Sbjct: 85 ALELARQIEPFLQSLHQALTQPSVFDPASAQRVFRIGLSDSLELLLMPEIMARLAAAAPG 144 Query: 126 ATIKLRNWDYDSLDA-ITRGEVDIGFS-GRESHPRSRELLSSLPLAIDYEVLFSDVPCVW 183 + R+ D A + G +++ RE P R +PL V + V Sbjct: 145 VKLIARSTDSTRAAAMLDDGAIELAVGVFRECVPWQR----LMPLFSWRFVSVYNPQLVR 200 Query: 184 LRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 R+ H ++D FLR+ H+ + +D L+ G R + S F S F Sbjct: 201 TRRKH------LSMDEFLRHRHVLTSFSAELRGFIDERLELQGLNREVVFSSSNFATSPF 254 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVP---FTLLWHKRNSH 300 + + +AT P + + L L PLPF EVP +L+W + Sbjct: 255 IVQR--TAAIATVPEFIGRVWR-DTLGLALSPLPF--------EVPGYEVSLMWAAAHDQ 303 Query: 301 NPKIVWLRETIKNLYAS 317 +P + WL+ + + + Sbjct: 304 DPALAWLKREFADAFGT 320 >UniRef50_C9NXV6 Transcriptional regulator LysR family n=1 Tax=Vibrio coralliilyticus ATCC BAA-450 RepID=C9NXV6_9VIBR Length = 303 Score = 89.7 bits (221), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 77/319 (24%), Positives = 135/319 (42%), Gaps = 25/319 (7%) Query: 4 SITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLS 63 +I+ ++L+ L LQ++ + +++T+A +R +T SAVS +L KLR F+D L + + Sbjct: 3 NISDIELSQLRLLQIIFETKNLTQAGERAGLTQSAVSHTLKKLRHSFNDSLVIRQGNKMV 62 Query: 64 PTPLMVSMEQNLAEWMQ--MSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQ 121 TP S++ +L W+ N+L + F +A + I+ LS+ + Sbjct: 63 LTPRAESLQTSLGRWLNDFERNILFQEVFDPLTSDRTFYIATSDLVEHILAPHLSRHFGR 122 Query: 122 RYPQATIKLRNWDYDSLDA-ITRGEVDIGFSGRES-HPRSRELLSSLPLAIDYEVLFSDV 179 P I R + +L + I GEVD S +S HP + L+ D Sbjct: 123 IAPNIRIVFRKIEKRALASQIESGEVDFAISVIDSTHPN-----------LMVRTLYRDD 171 Query: 180 PCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFE 239 +R HP L+ F +YPH+ + +D+ L+ LG R + + F Sbjct: 172 FVSVVRAGHPLLNSKIKAKDFCQYPHVLASTGNDNRGMVDDALEGLGLSRVMQYKVANFS 231 Query: 240 QSLFMAAQPDNLLLATAPR-YCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRN 298 + ++ D +L TAPR + + P+ + K + WH +N Sbjct: 232 SAPYIVESSDAIL--TAPRTFVDLIAGKFNVSSFTPPVELESYAMK-------MYWHIKN 282 Query: 299 SHNPKIVWLRETIKNLYAS 317 + W RE I + A+ Sbjct: 283 KDDQANRWFREQIAEITAA 301 >UniRef50_A5CSX6 Putative transcriptional regulator, LysR family n=1 Tax=Clavibacter michiganensis subsp. michiganensis NCPPB 382 RepID=A5CSX6_CLAM3 Length = 306 Score = 89.7 bits (221), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 79/312 (25%), Positives = 129/312 (41%), Gaps = 31/312 (9%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 LDLNLL L L+ SVT+AA R+ ++P AVS++L +LR D + V + G+ PTP Sbjct: 4 LDLNLLRVLDALVATSSVTEAASRLALSPPAVSRALGRLRVSMGDEILVRAGRGMVPTPF 63 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRG--------LKFELAAESPLMMIMLNALSKQI 119 + + ++ LLD+ T G F + L+ ++ AL++++ Sbjct: 64 ALRVAASV-------RALLDEADGLTRAGDDDPSTWNRAFTIRMNESLIPVLAPALTERV 116 Query: 120 YQRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 P ++ + +A+ G +D+ R + P ++L++ PL D V Sbjct: 117 VAEAPGVLLRFVPQESKDAEALRDGTLDLDVGIRMASP--PDVLAA-PLVADRFVAVVGA 173 Query: 180 PCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFE 239 RK T LD +PH+S +D+ L+ GR R + P + Sbjct: 174 RTALGRK------TTLTLDDLAAHPHVSASRRGRARGPVDDALEATGRTRRVVAVAPTYA 227 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 + M ++ L P +PL A LPFD V WH+R Sbjct: 228 VAALMVVGSGSICL--LPELMTERLIDGGVPLRAHRLPFDLPG-----VQVDQRWHRRAD 280 Query: 300 HNPKIVWLRETI 311 +P WLR + Sbjct: 281 ADPASRWLRRAL 292 >UniRef50_B0C7Y6 Transcriptional regulator, LysR family n=1 Tax=Acaryochloris marina MBIC11017 RepID=B0C7Y6_ACAM1 Length = 305 Score = 89.7 bits (221), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 81/304 (26%), Positives = 144/304 (47%), Gaps = 22/304 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +DLNLL + +M E +V++AA+R+N+T AVS +L +LR +D LF+ P G+SPTP Sbjct: 5 IDLNLLHIFEAVMMELNVSRAAERLNMTQPAVSHALRRLRRITNDELFLKVPSGVSPTPK 64 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRGLK-FELAAESPLMMIMLNALSKQIYQRYPQA 126 + + + E + L L P + ++ F LA + + L L + P Sbjct: 65 ALELWGPIREGLVHIRLALSPPSFEPFSSMQTFTLAMADYSVALFLPKLLPILAHSAPNI 124 Query: 127 TIKLR-NWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 I++ N + ++ + + E+D+ R S++ L + E++ C+ +R Sbjct: 125 NIRIVPNTNINAAKLLEQSEIDLAM--------GRFYRSTVRLRVQ-EIIGDRYICI-MR 174 Query: 186 KDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMA 245 KDHP H+ L +++ H+ + T +D L+E+ R IA+++ +F + Sbjct: 175 KDHPLAHKRLTLKQYIKADHLLVTLTGEATGLVDKQLREMDLSRRIALTVNQFTLVPELI 234 Query: 246 AQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPF-TLLWHKRNSHNPKI 304 A D L+ A R + L + LPL K+ F ++WH+R+ +P Sbjct: 235 AGSD-LISAIPLRMVERNPFRTDLHITELPL--------KIAPAFLQMMWHERSQVDPAH 285 Query: 305 VWLR 308 WLR Sbjct: 286 EWLR 289 >UniRef50_Q0ARX0 Transcriptional regulator, LysR family n=1 Tax=Maricaulis maris MCS10 RepID=Q0ARX0_MARMM Length = 334 Score = 89.4 bits (220), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 76/311 (24%), Positives = 139/311 (44%), Gaps = 21/311 (6%) Query: 4 SITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLS 63 S+ +DLNLL+ L ER+VT+AA+R+NV+ VS +L++LR F D LF+ +P G+ Sbjct: 5 SLKHVDLNLLITFDALWHERNVTRAARRLNVSQPTVSNALSRLRLAFGDQLFLRAPRGIE 64 Query: 64 PTPLMVSMEQNLAEWMQMSNLLLDK-PHHQTPRGLK-FELAAESPLMMIMLNALSKQIYQ 121 PT + +++ E ++ LD P + + F + + +L L + + Sbjct: 65 PTERCSEIIKDVREALRHIEQALDSGPAFDAKQCRREFHIGCADYFDLFVLPDLLAYMAE 124 Query: 122 RYPQATIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 P ++LR+ D + +D + GE+D F P ++ P+ + V + Sbjct: 125 HAPMIDLRLRSVDIEEGMDLLDAGELD--FMMHMEFPAAKR-FGVRPVLHERHVFAT--- 178 Query: 181 CVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQ 240 R HP + + ++ TF H++ +D VL LG R +A++ Sbjct: 179 ----RAGHPLVREAPDIATFASLSHVNFSQRGDSESPVDEVLARLGYRRRVAITTQHMTT 234 Query: 241 SLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 + D L+A+ P + + P+PF Q +K P + W++R Sbjct: 235 VAHLVKTTD--LVASVPSRMA-ARMVEEGGFAVYPIPF---QIEK--APVAVYWNRRFEL 286 Query: 301 NPKIVWLRETI 311 + + W+R+ I Sbjct: 287 DGAMRWMRDAI 297 >UniRef50_D0XGK1 Putative uncharacterized protein n=1 Tax=Vibrio harveyi 1DA3 RepID=D0XGK1_VIBHA Length = 326 Score = 89.0 bits (219), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 81/318 (25%), Positives = 142/318 (44%), Gaps = 23/318 (7%) Query: 2 KKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLG 61 K + LDLNLL +L QER++ +AA+R+ V+ AVSK+L +LR F+D LFV + G Sbjct: 16 KDLFSNLDLNLLRTFIILHQERNMRRAAERLFVSQPAVSKALQRLRDHFEDELFVKTHHG 75 Query: 62 LSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGLK--FELAAESPLMMIMLNALSKQI 119 L T + +NLA + ++ L+ P + ++A ++ + + + I Sbjct: 76 LRATEYANDLAENLAPLLDEISITLNGSKAFNPLEMNGTIKIALAPFILSSYASEICQAI 135 Query: 120 YQRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 Q P I L NW ++D I + +V +G + +H +ELL+ + + D Sbjct: 136 RQAAPNVQIHLLNWSRSTMDEIIKDDVTLGVNYEINHA-PKELLTKM--------IVKDT 186 Query: 180 PCVWLRKDHP---ALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLP 236 C ++RKDHP Q + I+ W S +++ + +++ G E IA Sbjct: 187 FCAYVRKDHPFPGDRLQISDCRDLEFATVIAADWNSSVSFS-EKIMKIKGVEPKIAFRSE 245 Query: 237 EFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHK 296 + + A D + A+ +QL +L + E +E +H Sbjct: 246 LPSAIIDVVANSDMVFPASKTVNVDKISQLRRLDI--------EFDGIVIEPCLHAYYHH 297 Query: 297 RNSHNPKIVWLRETIKNL 314 +N N + WLR I ++ Sbjct: 298 KNRRNEMVHWLRSIITDV 315 >UniRef50_P10183 HTH-type transcriptional activator nahR n=67 Tax=Bacteria RepID=NAHR_PSEPU Length = 300 Score = 89.0 bits (219), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 82/319 (25%), Positives = 131/319 (41%), Gaps = 37/319 (11%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 LDLNLL+ L+ +R V+ A+ + +T AVS +L +LR DPLFV + G+ PTP Sbjct: 6 LDLNLLVVFNQLLVDRRVSITAENLGLTQPAVSNALKRLRTSLQDPLFVRTHQGMEPTPY 65 Query: 68 MVSMEQNLAEWMQ-MSNLLLDKPHHQTPRGL----KFELAAESPLMMIMLNALSKQIYQR 122 + + + M + N L HH++ L F LA + + L + + Sbjct: 66 AAHLAEPVTSAMHALRNAL---QHHESFDPLTSERTFTLAMTDIGEIYFMPRLMDVLAHQ 122 Query: 123 YPQATIK-LRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPC 181 P I +R+ + A+ G VD+ LL +L L + Sbjct: 123 APNCVISTVRDSSMSLMQALQNGTVDLAVG----------LLPNLQTGFFQRRLLQNHYV 172 Query: 182 VWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQS 241 RKDHP + L+ F Y H+ + + +D + +G R I + +P F Sbjct: 173 CLCRKDHPVTREPLTLERFCSYGHVRVIAAGTGHGEVDTYMTRVGIRRDIRLEVPHFAAV 232 Query: 242 LFMAAQPDNLLLATAP----RYCQYYNQLHQLPL-VALPLPFDESQQKKLEVPFTLLWHK 296 + + D LLAT P C L LP V LP E+ + WH Sbjct: 233 GHILQRTD--LLATVPIRLADCCVEPFGLSALPHPVVLP-----------EIAINMFWHA 279 Query: 297 RNSHNPKIVWLRETIKNLY 315 + + +WLR+ + +L+ Sbjct: 280 KYHKDLANIWLRQLMFDLF 298 >UniRef50_B7VU21 Transcriptional regulators, LysR family n=1 Tax=Vibrio splendidus LGP32 RepID=B7VU21_VIBSL Length = 309 Score = 88.6 bits (218), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 63/190 (33%), Positives = 98/190 (51%), Gaps = 11/190 (5%) Query: 2 KKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLG 61 K LDLNLL ++ QE+++ KA+ R++V+ A+SKSL +LR FDD LF+ P G Sbjct: 3 KDFYNNLDLNLLRTFLVIYQEKNLQKASTRLHVSAPALSKSLNRLRHHFDDQLFLKVPRG 62 Query: 62 LSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELA-AESPLMMIMLNA-LSKQI 119 LSPTP ++ Q +A N + P L +L A SP ++ + L +I Sbjct: 63 LSPTPFSDNLAQKIAPTFDTLNNNIKSLQEFAPSDLNGKLTIAISPFLLHAIGKDLFTEI 122 Query: 120 YQRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 +Q+ P + L NW SL+ I+ G +G + P SR+ ++ + + D Sbjct: 123 HQQAPNVELHLVNWSKSSLEDISIGTSKLGIN--YDLPLSRKDIAC-------QFITKDQ 173 Query: 180 PCVWLRKDHP 189 V++RKDHP Sbjct: 174 FRVYVRKDHP 183 >UniRef50_Q7MQI2 Transcriptional regulator n=36 Tax=Gammaproteobacteria RepID=Q7MQI2_VIBVY Length = 321 Score = 88.6 bits (218), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 91/321 (28%), Positives = 141/321 (43%), Gaps = 37/321 (11%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 + I DLNLL+ L++L++E SV+KAA R+N++ SA+S+ L +LR DPLF L Sbjct: 12 EEIYRRDLNLLVALRVLIEESSVSKAAVRLNLSQSAMSRVLGRLRDLLGDPLFTREGQHL 71 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLD----KPHHQTPRGLKFELAAESPLMMIMLNALSKQ 118 PT + +++ L E ++ LL PH T F +A M +L + Sbjct: 72 LPTEKALEIDRALGEPLESLRQLLSPSEFDPHLCTQ---TFTIATTDYAMQTILPFALPR 128 Query: 119 IYQRYPQATIKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFS 177 IYQ P + +D L D +T D+ R + P E L S EVL Sbjct: 129 IYQEAPNVSFHFLPLQHDRLADQLTYEGADLAIC-RPTGP--VEPLRS-------EVLGR 178 Query: 178 DVPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPE 237 L K HP + +L +L YPH I ++ L + +R + + Sbjct: 179 VGVLCLLSKQHPLAGKEMSLADYLYYPHAMIAISDGVKALIEQALVD-QPQRKMVLRAYH 237 Query: 238 FEQSLFMAAQPDNL-LLATAPRYCQY-YNQLHQLPLVALPL---PFDESQQKKLEVPFTL 292 E +L + D + L+ T P Y + + L + ALP PFD +++ Sbjct: 238 LEAALAIV---DTMPLIITVPADLAYLVAERYDLVVKALPFQFTPFD----------YSM 284 Query: 293 LWHKRNSHNPKIVWLRETIKN 313 +WH R H+P WLR ++ Sbjct: 285 IWHPRCEHSPAQEWLRSVVRE 305 >UniRef50_B2JFW9 Transcriptional regulator, LysR family n=39 Tax=Burkholderia RepID=B2JFW9_BURP8 Length = 342 Score = 88.6 bits (218), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 83/318 (26%), Positives = 132/318 (41%), Gaps = 35/318 (11%) Query: 2 KKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLG 61 + + +LD+ L+ L+ L+ ERSVT+ A R+N T A+S +L KLR +DP+ V G Sbjct: 3 EDTAASLDIWLVRVLRTLLVERSVTQTALRLNQTQPAISTALRKLRETLNDPILVRGKSG 62 Query: 62 LSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG--------LKFELAAESPLMMIMLN 113 + PT E + +L D TP G F +AA L + Sbjct: 63 MVPT------EYGESLLAAAQKVLRDVDFVATPHGDFDPARSRRTFRIAAPDYLNDFFMP 116 Query: 114 ALSKQIYQRYPQATIKLRNWD--YDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAID 171 + Q + P A +++ + +D A+ GE+D+ G P R + Sbjct: 117 TVIAQFRETAPHARLEIESLGPLFDHTCALDAGELDL-VIGNWPKPDLR---------FE 166 Query: 172 YEVLFSDVPCVWLRKDHPALHQTWNLDTFLRYPHISIC-WEQSDTWALDNVLQELGRERT 230 LFSD +R DHP D +L PH++ + + A+D R Sbjct: 167 RSDLFSDTVVCMMRADHPLAKAPLTRDAYLAAPHLAPAHYSGARGGAIDTGFARARASRR 226 Query: 231 IAMSLPEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPF 290 I +LP F + Q D L+ T R+ +Y + L +V +P+PF + + Sbjct: 227 IVATLPYFGLVPQVLLQSD-LIFTTTRRFALHYAAMLPLAVVDVPIPFPRIKCYQ----- 280 Query: 291 TLLWHKRNSHNPKIVWLR 308 +WH + I WLR Sbjct: 281 --MWHPQPDRPSDIAWLR 296 >UniRef50_C6ARG9 Transcriptional regulator, LysR family n=7 Tax=Proteobacteria RepID=C6ARG9_RHILS Length = 310 Score = 88.6 bits (218), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 79/309 (25%), Positives = 138/309 (44%), Gaps = 21/309 (6%) Query: 9 DLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLM 68 DLNLL LM+ER+VT+AA+++ +T AVS +L +LR DPLF+ G+ PT + Sbjct: 4 DLNLLPVFVALMEERNVTRAAEQLGMTQPAVSNALNRLRETLRDPLFIRERYGMKPTEMA 63 Query: 69 VSMEQNL-AEWMQMSNLLLDKPHHQTPRGLK-FELAAESPLMMIMLNALSKQIYQRYPQA 126 ++ + + +++L + R + F +A S + +++ + ++ + P Sbjct: 64 EALAPVIRGALASLDDVILGQQAFDPARATRQFTIAPNSYVEFVLMPVIVARLRECAPGI 123 Query: 127 TIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRK 186 ++L + D + GR P P + + L D +RK Sbjct: 124 RLRLTPFGNDLAETGAMSGATEMVLGRIVEP---------PDNMVVQHLMDDGLACVVRK 174 Query: 187 DHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAA 246 DHP + ++ + + + R H+++ L +LQ+ G R +++S+ F M A Sbjct: 175 DHPEIAESISEEQYQRMRHVNVLPPGRMRVGLFQMLQQAGLRRDVSVSVTHFLAVPEMVA 234 Query: 247 QPDNLLLATAPRYCQYYNQLHQLP-LVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIV 305 D AT PR + +L + P L LP P D + P L WH R ++P Sbjct: 235 VTD--YCATLPRLICH--RLARDPRLKVLPAPVDLGR-----FPVELAWHVRYRNDPAHR 285 Query: 306 WLRETIKNL 314 WLR I + Sbjct: 286 WLRSLISEV 294 >UniRef50_A8KZI9 Transcriptional regulator, LysR family n=4 Tax=Actinomycetales RepID=A8KZI9_FRASN Length = 310 Score = 88.2 bits (217), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 81/314 (25%), Positives = 138/314 (43%), Gaps = 22/314 (7%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 +S ++LDLNLL+ L L++ERSV AA+R+ +T SAVS++L +LR DDP+ V + + Sbjct: 5 QSTSSLDLNLLVALDALLEERSVNAAARRLRLTESAVSRALGRLRRAMDDPVLVRAGHRM 64 Query: 63 SPTPLMVSMEQNLAEWMQMSNLL---LDKPHHQTPRGLKFELAAESPLMMIMLNALSKQI 119 PTP ++++ + ++ ++ + + +P T F + A L + L ++ Sbjct: 65 VPTPRALAVQAEVHALVERAHAVFTPIREPDLAT-LARTFTILASDALTTAIGVDLLDRL 123 Query: 120 YQRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 + P ++ + D + G D+ ++ S+ P I EVL + Sbjct: 124 TRDAPGVRVRFLPEPSATDDPLRDGTADLEIG---------DIDSTSP-EIHIEVLGEEQ 173 Query: 180 PCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFE 239 +R HP + H++ LD VL G RT+A+S+P Sbjct: 174 ALAVVRAGHPLTRGRLTPERLAAARHVTASRRGRFAGPLDEVLAARGLRRTVAVSVPSHS 233 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 +L + A D + L A R + L L LVAL L D + WH R Sbjct: 234 AALLLVAGSDLVGLVPA-RLGR--GLLDSLGLVALDLGLDLPT-----LTIAQAWHPRYE 285 Query: 300 HNPKIVWLRETIKN 313 + WLR +++ Sbjct: 286 ADAPHRWLRGHVRD 299 >UniRef50_Q5QVJ9 Transcriptional regulator, LysR family n=1 Tax=Idiomarina loihiensis RepID=Q5QVJ9_IDILO Length = 331 Score = 88.2 bits (217), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 80/319 (25%), Positives = 149/319 (46%), Gaps = 33/319 (10%) Query: 4 SITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLS 63 ++ +LDLNLL+ L L++E+ VT+AA+R+ ++ A S +L + R FDDPL + Sbjct: 29 NLRSLDLNLLVILHALLEEQHVTRAARRLALSQPATSNALDRCRHIFDDPLLERVAGEMR 88 Query: 64 PTPLMVSMEQNLAEWMQMSNLLLDKPH---HQTPRGLKFELAAESPLMMIMLNALSKQIY 120 T S+++ L++ + +++ P Q + ++ + A+ P +++M + L+K + Sbjct: 89 LTAKAQSLKEPLSQALLAITAIVEIPKVELTQVRQTVRL-IMADQPGLIVMTHLLTK-LS 146 Query: 121 QRYPQATIKLRNW--DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSD 178 P+ + L W D+L + GE DI S +LP + + + Sbjct: 147 TSAPKVNLSLLPWRSSKDALHRLENGEADIAIST----------FPALPPKFYRQQIAYE 196 Query: 179 VPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEF 238 V +R HPA Q +N D +L +PHI + E + +++ VL + G+ R + +P F Sbjct: 197 SYVVAMRASHPAA-QKFNADEWLAWPHIVVSGEGNARGSVEEVLAQQGKVRHVGAVVPNF 255 Query: 239 EQSLFMAAQPDNLLLATAPRYCQYYNQLHQL--PLVALPLPFDESQQKKLEVPFTLLWHK 296 + D ++AT P C Q + P +A+P L WH Sbjct: 256 TMIDPLIKATD--MIATTPMNCLSDPQGLAIFEPPIAVP-----------GFSLHLAWHA 302 Query: 297 RNSHNPKIVWLRETIKNLY 315 R + + + ET+++L+ Sbjct: 303 RRDSDLVVKHVIETLQHLF 321 >UniRef50_Q0BYJ0 Transcriptional regulator, LysR family n=1 Tax=Hyphomonas neptunium ATCC 15444 RepID=Q0BYJ0_HYPNA Length = 297 Score = 88.2 bits (217), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 85/327 (25%), Positives = 154/327 (47%), Gaps = 43/327 (13%) Query: 4 SITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLS 63 ++ +LDLNLL L+ + ERS+T+A++ +++T AVS +L++LR F+DPLFV G+ Sbjct: 2 NLRSLDLNLLPVLEAIYAERSLTRASEVLHITQPAVSNALSRLRLHFEDPLFVREGRGVK 61 Query: 64 PTPLMVSMEQNLAEWM-QMSNLLLDKPHHQTPRGLK-FELAAESPLMMIMLNALSKQIYQ 121 PT + ++ + E + ++ N L + + R + F +++ I+ +++++ Sbjct: 62 PTAMTEALMPAIRESLDKLRNGLEPRSVFEPSRSTRVFNISSRDASAHILAPPIARRLEV 121 Query: 122 RYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYE-------- 173 + P I +W AI E+ SGR L LAID + Sbjct: 122 QAPGVRI---SWSQPQRSAIA-SELA---SGR------------LDLAIDVQDLRGADLE 162 Query: 174 -VLFSDVPCVW-LRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTI 231 VL S V L DHP ++ LD F HI++ + ++ + + LG T Sbjct: 163 RVLLSSTKYVCALASDHPLANEPLTLDKFFSMRHIAVSSRREGRSLIEEMARSLGHRITP 222 Query: 232 AMSLPEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFT 291 LP ++ +L + + +L LA AP+ + L + LPFD + Sbjct: 223 VHRLPHYQPALEV-VRCTHLALA-APQPVTEGSG-----LAVMKLPFDFPSPGSM----- 270 Query: 292 LLWHKRNSHNPKIVWLRETIKNLYASM 318 L WH+ + +P ++WLR I+++ ++ Sbjct: 271 LYWHREYAQDPALMWLRGLIRDVSVTL 297 >UniRef50_A1UYR8 Transcriptional regulator, LysR family n=32 Tax=Burkholderia RepID=A1UYR8_BURMS Length = 313 Score = 87.8 bits (216), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 81/319 (25%), Positives = 145/319 (45%), Gaps = 24/319 (7%) Query: 4 SITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLS 63 ++ ++DLNLL+ L L+ ER VT+A +RI +T AVS +L +LR F D + + +PLG+ Sbjct: 2 NLRSIDLNLLVILDALLAERQVTRAGQRIGLTQPAVSNALGRLRYVFKDEILMRTPLGME 61 Query: 64 PTPLMVSMEQNLAEWMQMSNLLLDKPHHQ---TPRGLKFELAAESPLMMIMLNALSKQIY 120 TP ++ + + +Q L P +Q +F L +++ L + I Sbjct: 62 LTPRAKALACPIRQILQQIEELF-VPENQFDSFTSDRRFTLRMSDLTELLLPPPLLRNIR 120 Query: 121 QRYPQATIKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 P + + + + D +++A+ G +D+ HP AI +VLF D Sbjct: 121 GTAPHIRMNVMHLNADKTVEALDSGRLDMAVCAGLDHPD----------AISSQVLFQDR 170 Query: 180 PCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFE 239 L + HP ++ L+ F +++ D+ +D +L ++ R IA ++P + Sbjct: 171 LVCVLSRRHPDANRPLTLERFAALDFLNVSINPVDSSLIDTMLADMRFTRRIAFNVPHW- 229 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 L + + D L LA ++ H L L L E V +TL WH+R Sbjct: 230 --LVVPSMLDALPLAV------IMSERHALSLGDSRLAIRELPLDLEPVTWTLYWHRRYD 281 Query: 300 HNPKIVWLRETIKNLYASM 318 ++ WLR I ++ ++ Sbjct: 282 NSVAHEWLRNCITDVVDAI 300 >UniRef50_Q11CG0 Transcriptional regulator, LysR family n=1 Tax=Chelativorans sp. BNC1 RepID=Q11CG0_MESSB Length = 304 Score = 87.8 bits (216), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 84/321 (26%), Positives = 144/321 (44%), Gaps = 32/321 (9%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +DL L +LM+ER+V++AA ++ + +S+ LAKLRA+FDDPL V S + PTP Sbjct: 6 IDLFTLRGFSILMEERNVSRAAFKLGLKQPTMSRMLAKLRAYFDDPLLVWSGGHMVPTPR 65 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPR--GLKFELAAESPLMMIMLNALSKQIYQRYPQ 125 + +E + + + L P P+ GL LAA + L + ++ R P Sbjct: 66 AILLESEIHQVLATMERLSSSPQEFDPKTSGLTIRLAATGYTENVFLARVMSEVAVRAPG 125 Query: 126 ATIKLRNWD--YDSLDAITRGEVD--IGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPC 181 +++R D +D+ A+ +GEVD +G++ ++ P+ + VLF+D Sbjct: 126 VQLEIRPPDRLHDT-SALEKGEVDFLVGWN-----------VTPAPV-LRSRVLFTDELV 172 Query: 182 VWLRKDHPALHQ-TWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQ 240 R HPAL + + ++ PH+ T L +L E +R + Q Sbjct: 173 CIARAGHPALEDGNLSYERYVALPHVQFDTPSKTTTEL--LLHERLAQRGDRPFVQFRVQ 230 Query: 241 SLFMAAQ---PDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKR 297 +L A+ +L+ + R+ Y Q +QL + LP+ Q + WH+R Sbjct: 231 NLLTVAEIVANSDLIATVSKRFVISYLQQYQLSIAELPVRLPVMQNRA-------WWHER 283 Query: 298 NSHNPKIVWLRETIKNLYASM 318 P W R + + +M Sbjct: 284 MHREPYSHWFRSLLAEIGKTM 304 >UniRef50_B6RAE8 Transcriptional Regulator, LysR family n=1 Tax=Pseudovibrio sp. JE062 RepID=B6RAE8_9RHOB Length = 307 Score = 87.8 bits (216), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 78/312 (25%), Positives = 141/312 (45%), Gaps = 19/312 (6%) Query: 4 SITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLS 63 ++ +DLNLL+ L+ L++ R V+ AA +++++ AVS++L +LR +DPL V Sbjct: 5 NLRGVDLNLLVILEKLLETRHVSLAATQLHMSQPAVSRALQRLRDLLNDPLLVRIAGDYE 64 Query: 64 PTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNA--LSKQIYQ 121 T +++ L + ++ KP P + + P + + L L K++ Q Sbjct: 65 LTERAAEIQRLLPSVLATIQDVIAKPEFD-PATAQETIRFSGPELEVNLYGPPLLKRMKQ 123 Query: 122 RYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPC 181 P ++L++ + + + GE SG+E + +L Y L S Sbjct: 124 EAPGMKLELKSNIRNQFEPLENGEAHFVLSGQEPSAATSQLHRISLGRFSYVCLMS---- 179 Query: 182 VWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQS 241 KDHP + +L+ +L HIS+ S +D L +GR+R +A+ + F + Sbjct: 180 ----KDHPLAGKPISLNDYLAQDHISVMITGSGQSIIDEKLAAMGRKRNVAVKIGSFFAA 235 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLP-FDESQQKKLEVPFTLLWHKRNSH 300 + Q D L L + + Y + +A P+P F + ++ F L WH+ H Sbjct: 236 MHFCGQTDLLFLVPSIFDKKIYEGHNT---IASPVPDFLKDHHQE----FFLYWHECYHH 288 Query: 301 NPKIVWLRETIK 312 +P I W R +K Sbjct: 289 DPMIQWTRTLMK 300 >UniRef50_D2YJX0 Transcriptional regulator, LysR family n=1 Tax=Vibrio mimicus VM573 RepID=D2YJX0_VIBMI Length = 314 Score = 87.4 bits (215), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 76/316 (24%), Positives = 140/316 (44%), Gaps = 29/316 (9%) Query: 9 DLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLM 68 DLNLL +M SV KAA ++N+T +AVS++L++LR +PLF+ GL PT Sbjct: 19 DLNLLTVFDAVMTLGSVNKAADKLNMTSAAVSQNLSRLRDQVGEPLFIRQGRGLQPTQYA 78 Query: 69 VSMEQNLAEWMQMSNLLLDKPHHQTP--RGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 ++M ++++ + L+ P +F + +++L L ++I + P Sbjct: 79 LNMHKHVSAGLSAIRFGLETNACFDPATSTREFVIGGHGYFDLVVLPQLLRKISEVAPHI 138 Query: 127 TIKLRNWDYDSL---DAITRGEVDIGFSGRESHPRSRELLSSLPL---AIDYEVLFSDVP 180 T+ L+ ++ D ++ E D+ L+SLP+ +I + + Sbjct: 139 TVNLKPYEDDHFTPSQVLSEREADL-------------FLASLPISHPSIITTQIAEEAL 185 Query: 181 CVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQ 240 V K+HP L +T F H ++ + + ++L + R + + Sbjct: 186 VVVYAKNHPRLGETLTFQQFFDEKHTALTSRRFGHYLFSSLLDQALPARKVHYQ-SDSML 244 Query: 241 SLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 +L A +LL T R + + +L L PLPF+ VP + WHK Sbjct: 245 NLMATASVTDLLCFTPKRLADMWAE--KLGLHIQPLPFEMR-----PVPTFMCWHKAKQQ 297 Query: 301 NPKIVWLRETIKNLYA 316 + ++WLRE I+ +++ Sbjct: 298 DKGLIWLREQIEEVFS 313 >UniRef50_A6D744 Putative transcriptional regulator n=1 Tax=Vibrio shilonii AK1 RepID=A6D744_9VIBR Length = 311 Score = 87.4 bits (215), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 84/313 (26%), Positives = 146/313 (46%), Gaps = 23/313 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 LDLNLL ++L+QER+ K A+R+ VT A+S++L KLR DD LFV GL PTP Sbjct: 11 LDLNLLKTFRVLLQERNARKTAERLFVTQPAISQALQKLRFHLDDELFVKVQGGLEPTPF 70 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELA-AESPLMMIML-NALSKQIYQRYPQ 125 + +E+ +A ++ L++ +P L+ + A +P+++ L +L ++ ++ P+ Sbjct: 71 ALQVEEKIAPYLDGLEASLEQLSDFSPSELEGTIKIALAPIVLSCLAGSLFTELRKQAPK 130 Query: 126 ATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 ++L +W + + + GEV IG L S+ I L V++R Sbjct: 131 LNLELVSWTQQTPEQLRSGEVFIGIHYD---------LDSISKEIARTKLADLEGQVYVR 181 Query: 186 KDHPALHQTWNLDTFLRY---PHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 +DHP + ++ IS W + ++A +L++LG E +A E ++ Sbjct: 182 QDHPLKGEVITAHDAAQFEIASLISPGWNDNFSFAA-QILEQLGYEPKVAFR-SEVLMAI 239 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 ++LL + H L AL D K +T L H +N H+P Sbjct: 240 IDVVSATDILLP----HSNLLPNRHSSGLRALRFELDGRTYTK--SLYTYL-HNKNRHSP 292 Query: 303 KIVWLRETIKNLY 315 K WL + ++ + Sbjct: 293 KAQWLEKILREKF 305 >UniRef50_A6AT33 Transcriptional regulator n=2 Tax=Vibrio harveyi RepID=A6AT33_VIBHA Length = 313 Score = 87.4 bits (215), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 82/320 (25%), Positives = 145/320 (45%), Gaps = 27/320 (8%) Query: 2 KKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLG 61 K + LDLNLL +L QER++ +AA R+ V+ AVSK+L +LR FDD LFV + G Sbjct: 3 KDLFSNLDLNLLRTFIILHQERNMRRAADRMFVSQPAVSKALQRLRDHFDDELFVKTHHG 62 Query: 62 LSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQ 121 L T + ++LA + ++ L+ P L+ + L +L++ + +I+Q Sbjct: 63 LRATEYANDLAESLAPLLDEISITLNGSKDFNP--LEMNGTVKIALAPFILSSYASEIFQ 120 Query: 122 RYPQAT----IKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFS 177 QA I L NW ++D I + EV +G + +H +ELL+ + + Sbjct: 121 AIRQAAPNVQIHLLNWSRSTMDEIIKDEVLLGVNYEINHS-PKELLT--------KEIVK 171 Query: 178 DVPCVWLRKDHPALHQTWNLDT--FLRYPH-ISICWEQSDTWALDNVLQELGRERTIAMS 234 D C ++RKDHP + L + I+ W + +++ + +++ G E IA Sbjct: 172 DAFCAYVRKDHPLQGDRLRVSDCQHLEFATVIAADWNSNISFS-EKIMKIKGVEPKIAFR 230 Query: 235 LPEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLW 294 + + A D + A+ ++L +L + E + +E + Sbjct: 231 SELPSAIIDVVANSDMVFPASKTVNVDKLHKLRRLDI--------ELEGMVIEPSLLAYY 282 Query: 295 HKRNSHNPKIVWLRETIKNL 314 H +N N + WLR + + Sbjct: 283 HHKNRRNDMVHWLRNIVTEI 302 >UniRef50_Q391B6 Transcriptional regulator, LysR family n=1 Tax=Burkholderia sp. 383 RepID=Q391B6_BURS3 Length = 300 Score = 87.0 bits (214), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 73/298 (24%), Positives = 127/298 (42%), Gaps = 26/298 (8%) Query: 20 MQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSMEQNLAEWM 79 + E SV+ AA+ ++++PSA+S++LA+++ D + V + G+ T +++ L + Sbjct: 16 IDEESVSGAARSLDLSPSAMSRTLARVQDAIGDKVLVRAGKGMVATETARRLKEPLDRIL 75 Query: 80 QMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQATIKLRNWDYDSLD 139 Q LLL H F ++A + + Q + +P A ++ ++ Sbjct: 76 QDVELLLGAQHRSIDAQRVFNISANDGFIDSFAVPIIAQAHDAWPHARLRFLPKHEKTVA 135 Query: 140 AITRGEVD--IGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPALHQTWNL 197 + GEVD IG G E+ P I LF D LRK H + L Sbjct: 136 RLRSGEVDIEIGVVG-ETGPE-----------IMIRKLFDDRMVGVLRKGHRLARRRMTL 183 Query: 198 DTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQPDNLLLATAP 257 D +L PHIS+ + +D+ L E GRER + +P F+ + +A + D + Sbjct: 184 DAYLSVPHISVSRKGRFHGPIDDALSEQGRERNVIAVVPNFKSGIELAQRSDWIAHVPEK 243 Query: 258 RYCQYYNQLHQLPL-VALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWLRETIKNL 314 Q + + L VA P + +++WH R + LR+ I N+ Sbjct: 244 HTAQARHDVVTFDLPVATP-----------ALAISIMWHPRFERDAVHAGLRDLIVNV 290 >UniRef50_A6F7C1 Transcriptional regulator n=1 Tax=Moritella sp. PE36 RepID=A6F7C1_9GAMM Length = 308 Score = 87.0 bits (214), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 85/302 (28%), Positives = 134/302 (44%), Gaps = 36/302 (11%) Query: 25 VTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSMEQNLAEWM-QMSN 83 VT AA+R +T SA+SK+LAKLR F DPL + T ++ LA+ + + Sbjct: 24 VTAAAQRQYITQSAMSKNLAKLREIFADPLLIKMDNKSQLTEKAKQLKPELAQILNNIDG 83 Query: 84 LLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQATIKLRNWDYDSLDAITR 143 LL+ +F +A+ + +L A +Y P + L WD +L A+ R Sbjct: 84 LLMTGGFDPLQSQREFTIASTDYVTDYILPAALAHLYLHAPNIKLNLTYWDKFTLAAMER 143 Query: 144 GEVDIGFS-GRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPALHQTWNLDTFLR 202 GE+D+G + R H LS LPL D V C+ +R+ HP ++ L + + Sbjct: 144 GEIDLGATIIRPEHKH----LSYLPLEKDNYV------CI-MRQGHPLENEVLTLANYTQ 192 Query: 203 YPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQPDNLLLATAPRYCQY 262 YPH I +D L G R +A+ +P + + + A+ D+LL T P Sbjct: 193 YPHSIITSGADKASDIDVALSAQGLFREVALRIPSYSSAFSILAKTDHLL--TIPNS--- 247 Query: 263 YNQLHQLPLVALPLPFDESQQKK---LEVPF---TLLWHKRNSHNPKIVWLRETIKNLYA 316 +A L E +K +++P ++WH R H+ WLR+ LYA Sbjct: 248 ---------IADKLIIGEQFIRKDLPIKLPILQAAIIWHPRFDHDLAHKWLRD---ELYA 295 Query: 317 SM 318 + Sbjct: 296 QL 297 >UniRef50_A3Y808 Transcriptional regulator, LysR family protien n=1 Tax=Marinomonas sp. MED121 RepID=A3Y808_9GAMM Length = 301 Score = 87.0 bits (214), Expect = 9e-16, Method: Compositional matrix adjust. Identities = 85/316 (26%), Positives = 140/316 (44%), Gaps = 31/316 (9%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +DLNLL+ L + +SV+ AA + ++ SA S +A+LR F+D LFV + PTP Sbjct: 6 IDLNLLILFDALYRHQSVSLAADEVCISQSAFSHGIARLRKRFNDELFVRVNNQMQPTPR 65 Query: 68 MVSMEQNLAEWMQ-MSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNALSKQIYQRYPQ 125 + Q+L + + + N + D H +F+++A +L L Q+ + P Sbjct: 66 AEEIAQHLHQALPFIHNAINDSDHFDASMDKTEFKISATDYTEFSLLPKLVGQVSHQAP- 124 Query: 126 ATIKLRNWDYDS---LDAITRGEVD--IGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 IKL + L + EVD +GFS SSL I++ SD Sbjct: 125 -NIKLTVIGAKAPQPLTHLENNEVDFALGFSHEIE-------ASSL---IEHHTWLSDSY 173 Query: 181 CVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQ 240 C RK+HPAL Q +LDTFL H+ + +D VL + +R +++ LP Sbjct: 174 CTVARKNHPALTQGLDLDTFLELKHVRVSPWGEKQGIVDQVLAQHKLKRHVSLQLPSVLV 233 Query: 241 SLFMAAQPDNLLLATAPRYC--QYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRN 298 + D L+ T PR Q Q+ ++ + P+ + + WHK N Sbjct: 234 APHSIIHSD--LILTMPRIVAEQVAKQV-EIEIFTPPISIPDYH-------LNIYWHKIN 283 Query: 299 SHNPKIVWLRETIKNL 314 + W+++ ++L Sbjct: 284 ADKASFKWMKQLFQSL 299 >UniRef50_C4UEX0 Lys-R type regulatory protein n=1 Tax=Yersinia ruckeri ATCC 29473 RepID=C4UEX0_YERRU Length = 299 Score = 86.7 bits (213), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 80/317 (25%), Positives = 138/317 (43%), Gaps = 33/317 (10%) Query: 4 SITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLS 63 S+ +DLNLL+ L +L+ ER V++AAKR+ ++ AVS +L +LR DD L V G Sbjct: 3 SLRAIDLNLLVILDVLLSERHVSRAAKRLYMSQPAVSHALNRLRYLLDDELLVRVAGGFQ 62 Query: 64 PTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGL-KFELAAESPLMMIMLNALSKQIYQR 122 T ++ + L E ++ ++ + + +F +A ++L L +++ Q+ Sbjct: 63 LTRRAAALIEPLKEVLEKVRYIIGTGNFEPALATQRFRIALSDYGAAMVLPGLLQRLRQQ 122 Query: 123 YPQATIKLRNWDYDS-LDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSD-VP 180 P + + + ++ + G++D+ + LP + LF + Sbjct: 123 APGIDLVVEQASREQMIEQVMAGQLDLALG----------VFPDLPADMTASRLFEEHFV 172 Query: 181 CVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQ 240 CV + + A + + LD +L PH+ + ++ L ELG R +A +P F Sbjct: 173 CVIDQANPLARKKYFTLDDYLVQPHLLVSMRGESVGEVETALAELGVRRRVAAIMPHF-- 230 Query: 241 SLFMAAQP---DNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVP---FTLLW 294 +A Q +LLL A R Q + L L LPF VP F +W Sbjct: 231 --LLAPQALAGTDLLLTVASRVVTI--QQESMNLQRLTLPF--------TVPNFDFVQIW 278 Query: 295 HKRNSHNPKIVWLRETI 311 H RN WLR+ + Sbjct: 279 HNRNHGKEDHRWLRQQV 295 >UniRef50_C5CZY6 Transcriptional regulator, LysR family n=1 Tax=Variovorax paradoxus S110 RepID=C5CZY6_VARPS Length = 325 Score = 86.7 bits (213), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 83/324 (25%), Positives = 147/324 (45%), Gaps = 22/324 (6%) Query: 1 MKKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPL 60 M +S +D++LL L L+ ERSV++AA R+N T A+S +L +LR F DP+ V Sbjct: 1 MTRSQDLVDIHLLRVLAALVAERSVSRAAVRMNQTQPAISAALRRLRDAFGDPILVRERG 60 Query: 61 GLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQ 118 G+ PT + + ++ E + + +L P P + F +A L + + + Sbjct: 61 GMVPTARALQLRESAREVLGEIDRMLAGPERFEPGASTMTFTIATPDYLAASFMAEVVAR 120 Query: 119 IYQRYPQATIKLR--NWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLF 176 PQA + + YD A+ +GE+DI G P R LS L I+ E++ Sbjct: 121 FRAEAPQARLLIHPLTPGYDYERALAQGELDI-VIGNWPLPPERMHLS---LLIEDELV- 175 Query: 177 SDVPCVWLRKDHPALHQTWNLDTFLRYPH-ISICWEQSDTWALDNVLQELGRERTIAMSL 235 C+ + A L +L H + + +S +D+ L L + R + + Sbjct: 176 ----CMMSPGNPLAAPGAMTLQRYLAAAHVVPTPFAKSHRAVVDSHLAGLRQTRDARVFV 231 Query: 236 PEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWH 295 P + + ++ A+ D L+ TA + + + + LP+V++ P + + F LWH Sbjct: 232 PYYAMAPYLVAESD-LVFTTARHFAEQFTR--SLPVVSVAAPEGFPRMR-----FYQLWH 283 Query: 296 KRNSHNPKIVWLRETIKNLYASMA 319 +R+ H WLR + + +A Sbjct: 284 ERSQHQGAHRWLRSLLSTVGGHLA 307 >UniRef50_B8ERS8 Transcriptional regulator, LysR family n=1 Tax=Methylocella silvestris BL2 RepID=B8ERS8_METSB Length = 323 Score = 86.7 bits (213), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 79/328 (24%), Positives = 142/328 (43%), Gaps = 47/328 (14%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 I T+DLNLL + +M+ RSV +A++ + VT SAVS +L++LR D LF++ G+ P Sbjct: 4 IRTIDLNLLRVFEAVMRHRSVIRASRELGVTASAVSHALSRLRQALGDELFISGEAGMEP 63 Query: 65 TPLMVSMEQNLAEWMQ-MSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRY 123 T + +E + + ++ + + + +P T F +AA + + +L L ++ + Sbjct: 64 TARALELEPAIRDGLERIDHAVGAQPFVPTDAFRTFRIAATDYVAVAILPQLVGRLAEVA 123 Query: 124 PQATIKLRNWDYDSLDAI---TRGEVD--IGFSGRESHPRSRELLSSLPLAIDYEVLFSD 178 PQ I LR + ++ D + G +D +G+ G LP + + + Sbjct: 124 PQ--IDLRIFPFNRTDVVRHLDEGRIDFVMGWFG------------DLPDRMRRATIVVE 169 Query: 179 VPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRER--------- 229 + +R HP + +PHI + ++ A+D + G R Sbjct: 170 KEAMVVRTGHPLTEGPLTKERLFSFPHIVVELIGTEEAAVDGFFDDRGVWRRVWIERLLI 229 Query: 230 ----------TIAMSLPEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFD 279 +A+S+P + M D ++AT P + Q LV L LP++ Sbjct: 230 EADADQGEVGRVAVSVPHYAAVPPMVRVSD--MVATLPSALA-RAAVEQGSLVMLDLPYE 286 Query: 280 ESQQKKLEVPFTLLWHKRNSHNPKIVWL 307 L VP ++WH+R + WL Sbjct: 287 -----PLAVPVEMVWHQRTERDEGSQWL 309 >UniRef50_Q7NT25 Probable transcription regulator protein n=1 Tax=Chromobacterium violaceum RepID=Q7NT25_CHRVO Length = 310 Score = 86.3 bits (212), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 83/315 (26%), Positives = 135/315 (42%), Gaps = 23/315 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 L+LNLL L+ L++ R++T++A R+ +T SA+S+ L +LRA F DPL + T Sbjct: 5 LNLNLLRSLEALLETRNLTRSAARLGLTQSAMSRHLVQLRAQFQDPLLLREGQRFVLTER 64 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQ-TPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + L ++ L P + +F A L ML + ++ + P Sbjct: 65 AEELRLGLKAVLEQVEQLYQPPQFDPSACEREFSFAGSDYLAEYMLPDILDRVLPQAPGM 124 Query: 127 TIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRK 186 +K W D ++ G D+ + +P I + L D P + Sbjct: 125 RLKFIPWQAGRFDLLSDGAADL----------ISTIADEVPDNIYGKSLGQDQPMCVMAD 174 Query: 187 DHPALHQTWNL--DTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 +HP LH L D +L +PH + +D L G R I ++ P F +L + Sbjct: 175 NHP-LHDKPALERDDYLAWPHARVSSASDKDGFVDIQLARNGLSRQIRIATPYFVSALSI 233 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 ++ + LL T P + Q Q P+ A PLPF + + + LLWH R +P Sbjct: 234 VSR--SQLLLTLPEHLAVRFQ-RQFPVRAKPLPFIDYTYR-----YWLLWHGRADKDPAH 285 Query: 305 VWLRETIKN-LYASM 318 W R + + LY S+ Sbjct: 286 RWFRGHVFDVLYHSI 300 >UniRef50_B4ELV6 LysR family regulatory protein n=1 Tax=Burkholderia cenocepacia J2315 RepID=B4ELV6_BURCJ Length = 306 Score = 86.3 bits (212), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 74/303 (24%), Positives = 129/303 (42%), Gaps = 25/303 (8%) Query: 22 ERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSMEQNLAEWMQM 81 ERSVT+A R+ +T A S++L +LR D + V +P GL TP S+ Q ++ + Sbjct: 23 ERSVTRAGMRLGLTQPAASRALGRLRTLLHDRVVVRTPKGLEFTPRAASLAQRVSRVLTE 82 Query: 82 SNLLLDKP--HHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQATIKLRNWDYDSLD 139 + ++ T RGL F +A+ + + ++ ++ ++ + P + + ++++ Sbjct: 83 AAGIVAPAVFDPATARGL-FSIASLDHMALTLIPDVNARLERSAPGLDLDVPPSRSNNVE 141 Query: 140 AITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPALHQTWNLDT 199 +T G I + +LP I L+ D +R HPAL Sbjct: 142 LVTDGTAGIALGVFDD--------DTLPAGIYRRKLYDDNLVCIVRNGHPALSARLTPKR 193 Query: 200 FLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQPDNLLLATAPRY 259 F H+ + +D L G R IAM LP F + + A+ D + L R Sbjct: 194 FAALSHVLVTIGGRGGELVDAALARQGLHRRIAMRLPHFLVAPMVVAKSD-MTLVLPQRL 252 Query: 260 CQYYNQLHQLPLVALPLPFDESQQKKLEVPF---TLLWHKRNSHNPKIVWLRETIKNLYA 316 ++ + LV LP +EVP +++WH+R +P WLR+ I + Sbjct: 253 ARHVALSMPVTLVKLP----------VEVPSFSPSMIWHERTHDDPAHGWLRQQIVEVAR 302 Query: 317 SMA 319 M Sbjct: 303 EMG 305 >UniRef50_B6R352 Transcriptional regulator, LysR family n=1 Tax=Pseudovibrio sp. JE062 RepID=B6R352_9RHOB Length = 303 Score = 85.9 bits (211), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 77/315 (24%), Positives = 137/315 (43%), Gaps = 29/315 (9%) Query: 2 KKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLG 61 K + +LD L+ L+L+ + SVT+AA+ + V S VS L ++R DPLFV + Sbjct: 3 KMNYLSLDGRALMMLKLIHETGSVTQAAQMMGVNQSTVSHGLERVRGLLGDPLFVKAGRN 62 Query: 62 LSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGL--KFELAAESPLMMIMLNALSKQI 119 + PT M ++ + E +Q + L+ +P P +F + +++ ++ +++ Sbjct: 63 VVPTERMDALMPMVEELLQ-TLALIGEPSSFDPSTATNRFVIDCRDEDHNLLIPSVIRRL 121 Query: 120 YQRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 + P T++ R + ++ GE D+ F+ P S E ++ + LF D Sbjct: 122 RKEAPNVTLRCRLSHRHEVASLVDGEADLLFTPLPP-PDSHEFVA--------QTLFDDE 172 Query: 180 PCVW---LRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLP 236 V+ + +D P L+ ++ PH ++ + +D L ELG +R S P Sbjct: 173 FVVFYDPITRDAPD-----TLEKYVAAPHANMLVTADEVTFIDRALAELGHKRQTVYSAP 227 Query: 237 EFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHK 296 F A P L+AT PR L P+P ++V +WH Sbjct: 228 SFNA--LAATLPGTDLIATMPRKLICGGIKSGLASCNCPVPV-------VDVGINAIWHI 278 Query: 297 RNSHNPKIVWLRETI 311 RN +P W R+ + Sbjct: 279 RNRTSPAHKWFRDLV 293 >UniRef50_B4X4B4 LysR substrate binding domain protein n=1 Tax=Alcanivorax sp. DG881 RepID=B4X4B4_9GAMM Length = 304 Score = 85.9 bits (211), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 74/319 (23%), Positives = 138/319 (43%), Gaps = 23/319 (7%) Query: 1 MKKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPL 60 MK ++ ++DLNLL +M+ +++AA+ + ++ A+S +L +LR F D LFV + Sbjct: 1 MKLNLRSIDLNLLPVFDAIMEAGQLSRAAESLGMSQPAISAALQRLRHTFGDTLFVRTHH 60 Query: 61 GLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGLK--FELAAESPLMMIMLNALSKQ 118 G++PTP + L + L+ + P + F + + M++L L Sbjct: 61 GMTPTPRARELHDQLGPQLVALRDTLNPENRFDPATSQRHFRILSVDYFEMVVLGPLLAT 120 Query: 119 IYQRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSD 178 + Q+ P +++ D D D + +G D+ S + + + VL + Sbjct: 121 LRQQAPHVVLEIIAADDDMPDELHKGRADL----------SVDAFVADDDRLQRNVLLEE 170 Query: 179 VPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEF 238 V R+ HP + + FL H+ + ++ LD +L G +R + +F Sbjct: 171 KLVVIARRSHPHIKGHCDKQQFLDAEHV-VLPNRNRQLPLDQILNAPGWQRRTGARVTQF 229 Query: 239 EQSLFMAAQPDNLLLATAP-RYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKR 297 L + D L+AT P R Q Y + QL ++ P+ VP ++W Sbjct: 230 ASMLAVCGGSD--LIATVPDRLAQQYAETMQLQVLPFPVALP-------PVPIYMIWSPT 280 Query: 298 NSHNPKIVWLRETIKNLYA 316 +P WLR+ +++ A Sbjct: 281 QQRDPAHRWLRQQLEHTIA 299 >UniRef50_A1U2R6 Transcriptional regulator, LysR family n=3 Tax=Marinobacter RepID=A1U2R6_MARAV Length = 300 Score = 85.5 bits (210), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 80/313 (25%), Positives = 130/313 (41%), Gaps = 30/313 (9%) Query: 9 DLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL- 67 DLNLL + +E S+T+AAK +++T A+S SLA+LR F+DPLF + PTPL Sbjct: 7 DLNLLHVFDTIYREGSLTRAAKALHLTQPAISHSLARLRDHFNDPLFTRQGNQMVPTPLA 66 Query: 68 ---MVSMEQNLAEWMQMSNLL--LDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQR 122 + SM L + N D + L ES + +++ L+ Sbjct: 67 RRFLESMRPGLNQIQSAVNQFHAFDPASQRKTYALGLRDVLESTFLPQLISKLAP----- 121 Query: 123 YPQATIK-LRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPC 181 YP ++ R D + G++D ++L + +E+L D Sbjct: 122 YPDMEVQSQRVARRDMETQLAAGKLDFAI----------DVLLPVSNQTSHELLRQDRLV 171 Query: 182 VWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQS 241 V RK HP + Q ++ ++L HI + D L G +RTI + + + Sbjct: 172 VLARKGHPVIAQGLDMASYLEARHILVSSRAEGPGIEDFELSRHGAQRTIRLRCQHYYAA 231 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 + D LLL Y + Q + ++A P+ + L WHK Sbjct: 232 CRVVESSD-LLLTMPETYARIIAQNTDIEVLAPPVEMP-------SIDVHLYWHKAYEQE 283 Query: 302 PKIVWLRETIKNL 314 P +VW R+ ++NL Sbjct: 284 PALVWFRDLLRNL 296 >UniRef50_A0AZD8 Transcriptional regulator, LysR family n=17 Tax=Proteobacteria RepID=A0AZD8_BURCH Length = 394 Score = 85.5 bits (210), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 80/315 (25%), Positives = 143/315 (45%), Gaps = 26/315 (8%) Query: 4 SITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLS 63 ++ LD L+ L +L+ ER+V++AA R+N++ A S +L +LR DPL V S G+ Sbjct: 20 ALDVLDARLMRILLVLLTERTVSRAAVRLNMSQPATSAALKRLRTLLGDPLLVRSRYGMV 79 Query: 64 PTPLMVSMEQNLAEWMQMSNLL-LDKPHHQTPRGLK-FELAAESPLMMIMLNALSKQIYQ 121 PT + + L +++ + + + +P ++ + + L ++ + L + Sbjct: 80 PTEFGARLIEPLRNALRVIDFIRIQQPTFDARTSVRTYRIGCPDYLNVLFVPKLVALFRE 139 Query: 122 RYPQATIKLR--NWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 R P A + +D A+ GE+D+ R RSR + LF D Sbjct: 140 RAPHAQLVFHPLGDGFDDERALADGELDVVIDNRPVR-RSR---------FRQDDLFDDR 189 Query: 180 PCVWLRKDHP-ALHQTWNLDTFLRYPHI--SICWEQSDTWALDNVLQELGRERTIAMSLP 236 +R HP A F P + + W ++ + A+D L+ +G +R I ++LP Sbjct: 190 VVCLMRATHPLARRDAMTAARFAAAPQLCPTPSWLEA-SGAIDRQLERVGLQRRIVVTLP 248 Query: 237 EFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHK 296 FE + + D L+L T R ++Y +L LPL A+ LP + ++ + + W++ Sbjct: 249 HFELAAHALVRTD-LILTTTYRLARHYAKL--LPLAAVALPVEPP-----DIAYRITWNE 300 Query: 297 RNSHNPKIVWLRETI 311 S WLR I Sbjct: 301 SGSCAEGGRWLRGLI 315 >UniRef50_A0Z258 Transcriptional regulator, LysR family protein n=1 Tax=marine gamma proteobacterium HTCC2080 RepID=A0Z258_9GAMM Length = 313 Score = 85.5 bits (210), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 90/316 (28%), Positives = 148/316 (46%), Gaps = 36/316 (11%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 K ++ +DLNLL+ LQ+L++E SV+ AA+R+++T A+SK+L +LR F+DPLFV S G+ Sbjct: 4 KKLSKVDLNLLVSLQILLEECSVSSAARRMSITQPAMSKTLGRLRDTFNDPLFVRSKRGI 63 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFE--LAAESPLMMIMLNALSKQIY 120 PTP S+ L + + LL+ +P K E +A + + +L L+ ++ Sbjct: 64 QPTPRAQSIAAELPALLAAAEALLEAGDF-SPSAFKGEITIAISEYVGLSLLPPLTARLQ 122 Query: 121 QRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 + P +++ LD + G +D + S E Y+ L Sbjct: 123 KIAPGLSLRTITRVEGQLDKLAAGGLDFAVQLTRTD-YSEEF--------RYQSLGGSPL 173 Query: 181 CVWLRKDHPALHQTWNLDTFLRYPHISI-CWEQSDT---WALDNVLQELGRERTIAMSLP 236 V++R HP + ++ YP IS+ ++ +T ALD LQ A S+ Sbjct: 174 AVFVRDGHPLASKPLTRESLTEYPAISLYVSDRGETELPLALDPRLQ--------AGSVA 225 Query: 237 EFEQSLFMAA-----QPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFT 291 E S + A + D L+ P Y NQ +VAL LP +++Q V + Sbjct: 226 MLETSHLLTALEILRETDFTLV--CPAYLA-RNQGATRDVVALALPPEDAQY----VDYA 278 Query: 292 LLWHKRNSHNPKIVWL 307 L+ H+R +P WL Sbjct: 279 LVAHRRTQASPAHQWL 294 >UniRef50_B7QWJ8 Transcriptional regulator, LysR family n=1 Tax=Ruegeria sp. R11 RepID=B7QWJ8_9RHOB Length = 320 Score = 85.5 bits (210), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 85/325 (26%), Positives = 136/325 (41%), Gaps = 38/325 (11%) Query: 4 SITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLS 63 + TLDLNLL L + E S KA +R+ ++ SAVS +L++LR +DPLFV L Sbjct: 2 NFATLDLNLLRVLDAVFAEGSTVKAGRRLGLSQSAVSGALSRLRHALNDPLFVRQGNQLV 61 Query: 64 PTPLMVSMEQNLAEWMQMSNLLLDKPHH---QTPRGLKFELAAESPLMMIMLNALSKQIY 120 T S+ +L + LL P H T GL F ++A +++ L + Sbjct: 62 ATEFAESLRHDLRAELDRLETLLSPPSHFDPATASGL-FRISAADFFCDMLMPRLGDLLS 120 Query: 121 QRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLA-----IDYEVL 175 ++ P +L LD + R V ES R + L+ LP + E L Sbjct: 121 RKAPGIRAQL-------LDLVPRHHV-------ESLERQQADLALLPDTDLPDWMMREPL 166 Query: 176 FSDVPCVWLRKDHPALH-----QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERT 230 F V R+ +PA + D F PH+ T D L ++GR R Sbjct: 167 FRSEYAVLARRGNPATKDLRHGERMPFDLFCSLPHVLFAPHGDLTAQSDEALAKVGRRRR 226 Query: 231 IAMSLPEFEQSLFMAAQPDNLLLATAP-RYCQYYNQLHQLPLVALPLPFDESQQKKLEVP 289 + M++P F + ++ D L+ P + + ++ L L P+ D Q Sbjct: 227 VVMTVPVFSGVCRVVSESD--LIGLLPLQLARKVQPVYGLDLFVPPIAIDPIQ------- 277 Query: 290 FTLLWHKRNSHNPKIVWLRETIKNL 314 +WH++ P W+R+ I ++ Sbjct: 278 LIGVWHRKADTAPMAAWMRQQIFDI 302 >UniRef50_B4RWU1 Transcriptional regulator n=2 Tax=Alteromonas macleodii RepID=B4RWU1_ALTMD Length = 347 Score = 85.5 bits (210), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 78/303 (25%), Positives = 134/303 (44%), Gaps = 32/303 (10%) Query: 14 LCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSMEQ 73 + +M E ++T+AA R+++T AVS +L+++R ++D LFV G+ PT S + Sbjct: 1 MIFDAIMTEGAITRAADRLSMTQPAVSNALSRMRTAWNDELFVKDGRGIQPT----SFAK 56 Query: 74 NLAEWMQMSNLLLD-----KPHHQTPRGLK--FELAAESPLMMIMLNALSKQIYQRYPQA 126 NL W Q+ L + P P K F +AA ++ ++ L K I P Sbjct: 57 NL--WSQIQGPLGELEVAVNPTDFNPASAKRTFRIAATDNIVSMVWGPLRKVIENEAPGI 114 Query: 127 TI-KLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 I + N+D ++ + E ++ FS + P S I E + V +R Sbjct: 115 NIHAIPNYDMETDKILKDAEAELTFS-KYQEPGS---------VIRAEHVLDPSWVVVMR 164 Query: 186 KDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMA 245 DHP +L+ F+ H+ + + D VL LG R +AMS+ +F Sbjct: 165 PDHPLAKSQLSLEDFVAADHLLVSVTGDVSGPTDQVLANLGLRRRVAMSVNQFHN----- 219 Query: 246 AQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIV 305 A P LL + C + + + + + L E+ + + P +++WHKR + + Sbjct: 220 ATP---LLKESNLICVAPSLVMEKEIFSGELAVFETPIEIVSSPLSVMWHKRQDQDAGLQ 276 Query: 306 WLR 308 WLR Sbjct: 277 WLR 279 >UniRef50_C5AL93 Transcriptional regulator, LysR family protein n=13 Tax=Burkholderia RepID=C5AL93_BURGB Length = 331 Score = 85.5 bits (210), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 79/322 (24%), Positives = 136/322 (42%), Gaps = 24/322 (7%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 +S+ +DLNLL +++E+S+TKA R+ ++ A+S SLA+LRA FDDPLFV + G+ Sbjct: 2 RSLDGVDLNLLQVFLAIVEEQSLTKAGARLALSQPAMSYSLARLRALFDDPLFVRTRHGM 61 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTP--RGLKFELAAESPLMMIMLNALSKQIY 120 PTP+ + +A + L P F L+ M L ++ +++ Sbjct: 62 QPTPISQELAVIVARALDTVREALRYAERFDPAVSTRAFRLSLSDAGEMAYLPSICEEVN 121 Query: 121 QRYPQATIKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSD- 178 + P + ++ + DA+ +D L L ++VLF + Sbjct: 122 RLAPNIKVVVQPLPVGEIEDALRARRLDFAIGN----------LPELTARTRHQVLFEEG 171 Query: 179 VPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEF 238 C+ R+ L F R H+ + + ALD+ L+ G R I + +P F Sbjct: 172 YVCMMRRRVGGPARPALTLAEFGRASHVLVRSIEHSHHALDDALRTQGVARNIGLEVPHF 231 Query: 239 EQSLFMAAQPDNLLLATAP-RYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKR 297 + A D +AT P R Q + + + LP+ V T+ WH+ Sbjct: 232 VALPRVLAVTD--FVATLPRRLAQIFAKDGAFDIFELPVAI-------APVGVTMHWHEH 282 Query: 298 NSHNPKIVWLRETIKNLYASMA 319 + I W+R+ + + A Sbjct: 283 FHEDEGIAWMRQLLGQIMRRFA 304 >UniRef50_B7WQP0 Transcriptional regulator, LysR family n=1 Tax=Comamonas testosteroni KF-1 RepID=B7WQP0_COMTE Length = 295 Score = 85.5 bits (210), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 72/311 (23%), Positives = 131/311 (42%), Gaps = 22/311 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +D+ LL + + RSV++A + + + ++VS +L +LR F+D LFV + G+ PTP Sbjct: 1 MDMKLLSVFDEIYKTRSVSRAGENLGLAQTSVSLALGRLRRAFNDQLFVRTSEGMLPTPR 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTP--RGLKFELAAESPLMMIMLNALSKQIYQRYPQ 125 ++ L + +++ + P F LA + L AL ++ P+ Sbjct: 61 AAALVPQLRQALELLQSATRQQAEFDPASSSRAFRLAMTDISHLEFLPALMNKLGNIAPK 120 Query: 126 ATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 +++ D+ + G+ D+ + L + LF D +R Sbjct: 121 VRVEVLRITADTARLLEAGDADLAIG----------YMPELDAGFYQQKLFRDGFACVVR 170 Query: 186 KDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMA 245 + HP + + F H+ I + ++ L+ G +R +A+SLP + Sbjct: 171 RTHPRIDDNLTMTRFKTERHVIITAPGTGNEIVEQELKRQGAQRNVALSLPTLPGVGNLL 230 Query: 246 AQPDNLLLATAP-RYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 A D L+AT P R Q ++ Q+ +A P E K+ WH+R +P Sbjct: 231 AHTD--LIATVPHRIAQTLVKIAQVKAIASPYRLPEFAIKQ-------HWHERYQQDPAN 281 Query: 305 VWLRETIKNLY 315 WLR T+ L+ Sbjct: 282 RWLRSTLAELF 292 >UniRef50_Q1YVH2 Transcriptional regulator, LysR family protein n=1 Tax=gamma proteobacterium HTCC2207 RepID=Q1YVH2_9GAMM Length = 324 Score = 85.1 bits (209), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 88/329 (26%), Positives = 151/329 (45%), Gaps = 33/329 (10%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 + ++ LDLNLL+ LQ L++E+SVT+AA+R+ +T A+S+ L +LR DDPLF + L Sbjct: 4 QKLSRLDLNLLVALQALLEEKSVTRAAQRLFITQPAMSRVLQRLRQQLDDPLFTRTGNIL 63 Query: 63 SPTPLMVSMEQNLAEWMQ-MSNLLLDKPHHQTPRGLKFELAAESP-LMMIMLNALSKQIY 120 PTP ++ L + + +++ D P E+ P + I L + + Sbjct: 64 IPTPKAQELQLRLPMLLDGILDMVTDGEFD--PATYVGEITIAIPEFIAISLASQLTALL 121 Query: 121 QRYPQATIKLRNWDYDSLDA-ITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 +Y I + + DS+ ++ G +D + RE+ + + + +FS Sbjct: 122 NKYAPGVILSISSETDSVAGELSDGVLDFAIDIK------REITAE--VTARHLSIFS-- 171 Query: 180 PCVWLRKDHP-ALHQTWNLDTFLRYPHISI-------CWEQSDTWALDNVLQELGRERTI 231 P +W+R+ HP A LD L+YP++ ++D D L++ GR R+ Sbjct: 172 PSIWMREGHPLAKKNRVTLDEILQYPYVQYYLLIAKRVSARTDAR-FDRALRKQGRSRSK 230 Query: 232 AMSLPEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALP--LPFDESQQKKLEVP 289 AM + ++ D L++ +A +L+++ P LP + + VP Sbjct: 231 AMVTNQLMTAIETICASDCLMV-SAKFGSGMERELYRIVTKTYPDDLPHEGT------VP 283 Query: 290 FTLLWHKRNSHNPKIVWLRETIKNLYASM 318 LL HKR +P WL E I L M Sbjct: 284 LVLLQHKRTLGSPIHQWLSEKIVELARDM 312 >UniRef50_C5B758 Transcriptional regulator, LysR family, putative n=2 Tax=Edwardsiella RepID=C5B758_EDWI9 Length = 333 Score = 85.1 bits (209), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 83/315 (26%), Positives = 136/315 (43%), Gaps = 35/315 (11%) Query: 6 TTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPT 65 +D LL + L + S+T+AA R+ ++ +A S++L+KLR F D LFV G+ T Sbjct: 7 VAVDSELLALFRALAETGSLTQAAGRVGLSQAAASRALSKLRTVFQDLLFVKGGYGMQAT 66 Query: 66 PLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFEL---AAESPLMMIMLNALSKQIYQR 122 P + + +Q + L P+ P+ L+ L A ++ + MI + + K ++Q+ Sbjct: 67 PRARELMPRVTAALQALD-HLTMPYEFDPQTLRRTLYLGAVDNGVWMI-FSRVVKSLFQQ 124 Query: 123 YPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCV 182 P A I++ D ++ G +D+ +P L +P LF Sbjct: 125 APNARIEILPIGDDLFSSLKFGRMDLAI-----YP-----LIDIPADFHEANLFKTTFSC 174 Query: 183 WLRKDHPALHQTW-----NLDTFLRYPHISICWEQSDTWA-LDNVLQELGRERTIAMSLP 236 +R+ HP Q L Y + + A + N + G++ IAMS+P Sbjct: 175 LVRQGHPLARQMQCGEAPTLAQINAYRRLQVSLHDGQPGAVVGNAVHRQGKDYDIAMSVP 234 Query: 237 EFEQSLFMAAQPDNLL---LATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLL 293 F + + AQ D +L + TA + Q N L LP P E+ L+ Sbjct: 235 YFLAAPMILAQTDFVLTLPIQTARHFSQMAN------LAILPYPDGETTFYT-----RLI 283 Query: 294 WHKRNSHNPKIVWLR 308 WH R H+P I WLR Sbjct: 284 WHHRVHHDPVIQWLR 298 >UniRef50_B7VQV6 Transcriptional regulator n=10 Tax=Vibrionales RepID=B7VQV6_VIBSL Length = 315 Score = 85.1 bits (209), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 77/307 (25%), Positives = 138/307 (44%), Gaps = 20/307 (6%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 + ++LNLL L +L++E V++ A+R+++T SAVS+ LA+LR DPL V L P Sbjct: 2 LGNINLNLLRSLHVLLEECHVSRTAQRLHITQSAVSRQLAQLRDLCGDPLLVRDGNKLVP 61 Query: 65 TP-LMVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRY 123 T ++ + + +LL DKP + LA+ + +L + ++ + Sbjct: 62 TNRALLLKGKLDDLLGEFDHLLDDKPFDPQDWQGELVLASSDYVAQYILPIIVSEVSKDA 121 Query: 124 PQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVW 183 P + R W + L+ + + + S P+ + +SS+ L D V C+ Sbjct: 122 PHINLAYRLWQPNFLETLNESGIHLASS---MFPKKPDHVSSIKLGEDKSV------CL- 171 Query: 184 LRKDHPALHQTW-NLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 +R HP Q+ + + + Y HI + D L++ G +R IA+ +P F + Sbjct: 172 MRASHPLAKQSAISSEDIVNYSHIKVTGGGDKDSYSDIALKKQGHKRRIALQVPFFSSAG 231 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 + Q D L++ P + YN L + LPF+ + L+WH + ++ Sbjct: 232 NVLMQDDYLMI--VPEHIA-YNLGRHLDVAYFSLPFETEMHT-----YWLMWHPKYDNDS 283 Query: 303 KIVWLRE 309 W RE Sbjct: 284 AHKWARE 290 >UniRef50_B9Z947 Transcriptional regulator, LysR family n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z947_9NEIS Length = 330 Score = 84.7 bits (208), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 83/318 (26%), Positives = 137/318 (43%), Gaps = 35/318 (11%) Query: 4 SITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLS 63 ++ LDLNLL+ LMQER V++AA R+ + A+S +LA+LR DDPLFV S + Sbjct: 10 ALRRLDLNLLVAFDALMQERHVSRAAARLFLGQPAMSHALARLRQLLDDPLFVRSGSRME 69 Query: 64 PTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGLK--FELAAESPLMMIMLNALSKQIYQ 121 PTP + + W++ + L + P F LAA + ++ AL + + Sbjct: 70 PTPRACELAPQVRAWLEQAQQFLFRADAFDPAAAHATFRLAAPDGMEALLYPALIATLRR 129 Query: 122 RYPQATIKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAI-----DYEVL 175 P ++ + + D L A+ EVD+ L+++ PLA+ + Sbjct: 130 DAPGVRLRSQLLETDQQLAALDHDEVDL-------------LITAAPLALRDWHSRLRLF 176 Query: 176 FSDVPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTI-AMS 234 SD V R+ P L + L H+ + + +D++ G ER + +S Sbjct: 177 KSDFISVHSRRQLP-LPEPATLADLASCDHVVSSYRGTAAGVVDHLFAAHGLERRVQVLS 235 Query: 235 LPEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLP-LVALPLPFDESQQKKLEVPFTLL 293 +A P L++ P Y P L PLP + + L+ Sbjct: 236 ASLLAIGHIVAQAP---LMSIQP--AIYRGLFSTTPELACAPLP------GEARITVGLV 284 Query: 294 WHKRNSHNPKIVWLRETI 311 WH+RN +P +LR+T+ Sbjct: 285 WHRRNDRHPLHRYLRDTV 302 >UniRef50_A1R1P0 Putative transcriptional regulator, LysR family n=1 Tax=Arthrobacter aurescens TC1 RepID=A1R1P0_ARTAT Length = 314 Score = 84.7 bits (208), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 75/322 (23%), Positives = 142/322 (44%), Gaps = 49/322 (15%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +DLNLL+ +LMQER VT+AA ++++T AVS +L +LR FDDPLF S G+ PT Sbjct: 12 IDLNLLVVFHVLMQERHVTRAAAKLHITQGAVSAALGRLRLLFDDPLFQKSRTGMVPTAK 71 Query: 68 MVSMEQNLAEWMQ-MSNLLL-DKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQ 125 +++ + + ++ +S+L+ D+ T F +A L + + + + + Sbjct: 72 ALALAPRIGQSLKTVSDLVFQDEQFEPTTSNRTFHIAMSDDLEAVFVPKIVTEAIR---- 127 Query: 126 ATIKLRNWDYDSLDAITRGEVDIGFSGRESH----------PRSRELLSS----LPLAID 171 NW ++ FS +++ PR ++ + +P A Sbjct: 128 -----SNW-------------NVKFSFHQTNSVLWQEALDDPRMDLVMCATPPQVPAAYH 169 Query: 172 YEVLFSDVPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTI 231 + VLF+ L + +L+ + H+ + ++ + +D +L+ G ER Sbjct: 170 HSVLFASSYTCLYDGQRMKLSEPLSLEDYAGSGHLRVSYDAQRGF-VDEILESQGYERKA 228 Query: 232 AMSLPEFEQSLFMAAQPDNLLLATAPRY-CQYYNQLHQLPLVALPLPFDESQQKKLEVPF 290 S+ F ++ + D L+AT P Y + ++ L + P+P Sbjct: 229 VASISHFAGAVAVLRAAD--LIATIPTYTAKAFSDAAGLTMSQPPVPMP-------RFTI 279 Query: 291 TLLWHKRNSHNPKIVWLRETIK 312 +L+W P+ VWLR+ ++ Sbjct: 280 SLIWEVPKETQPEHVWLRKMMQ 301 >UniRef50_D0LUZ7 Transcriptional regulator, LysR family n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LUZ7_HALO1 Length = 306 Score = 84.7 bits (208), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 69/309 (22%), Positives = 131/309 (42%), Gaps = 22/309 (7%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 I +D NLL+ L L++E SVT+AA R+ +T SA+S +L +LR DPL V + + Sbjct: 3 IYGIDANLLVSLDALLREASVTRAAHRVGITQSAMSHALGRLRDHLGDPLLVRAGRNMVL 62 Query: 65 TPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGLK--FELAAESPLMMIMLNALSKQIYQR 122 T S+ ++ ++ + + P L+ F L A +++ + + + Sbjct: 63 TAKAESLAPRVSVLVEEMSRVFAPDEEFEPAALRRGFALRATDHAQFVLMPEVDRLLRAE 122 Query: 123 YPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCV 182 P + + ++ + + + D+ HP I + L +D Sbjct: 123 APGVDLVVTALSGGAVAPLRQAQSDLTLGTFSDHPSD----------IHSQALLTDRFVC 172 Query: 183 WLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 +R DHPA+ + + + HI + Q +D VL ELG R I+ +P + Sbjct: 173 LVRGDHPAIARGLGVAQYAAMTHIHVGPAQ--LGVVDRVLGELGIARRISRVVPHVLVAP 230 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 + A D ++ + R Q ++ ++ P+P ++ WH+R+ +P Sbjct: 231 LLIADSDA-VVTMSERLAQRALPGAEVAMLEPPVPLPPCT-------LSMAWHERHDADP 282 Query: 303 KIVWLRETI 311 WLR+ + Sbjct: 283 AHRWLRDAV 291 >UniRef50_B7RZL5 Transcriptional regulator, LysR family protein n=1 Tax=marine gamma proteobacterium HTCC2148 RepID=B7RZL5_9GAMM Length = 316 Score = 84.7 bits (208), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 80/310 (25%), Positives = 144/310 (46%), Gaps = 33/310 (10%) Query: 14 LCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSMEQ 73 + LQ+L++ER+VT+AA+R++V+ A+SK+L KLR F+D LF + GL PTP + Sbjct: 1 MALQILLEERNVTRAAERLSVSQPALSKTLHKLRDSFEDELFTRTAHGLVPTPRAEELGA 60 Query: 74 NLAEWMQMSNLLLDKPHHQTPRGL-KFELAAESPLMMIMLNALSKQIYQRYPQATIKLRN 132 L ++ +L + L F+L L +L L ++ + P + Sbjct: 61 QLPALLESVERVLGESDFDPLTYLGSFKLLLPPILCEALLPGLVAELDKTAPGVQVITAE 120 Query: 133 WDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHP-AL 191 D + + +GE+D F+ + R+ I E + + P ++R HP + Sbjct: 121 ITPDYQELLKKGEID--FAAFVALDTERD--------IHAEPIATLAPRCYMRIGHPLGV 170 Query: 192 HQTWNLDTFLRYPHISI---CWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQP 248 + L FL + H+ + + +T +D+VL + G R IA+ +F ++ + A+ Sbjct: 171 KKEIELQEFLAHNHLRLYLPGLTRENTSMVDDVLGQYGVHRKIALETTQFASAVGVLART 230 Query: 249 DNLLLATAP-RYCQYYNQLHQLPLVALPLPFD---------ESQQKKLEVPFTLLWHKRN 298 D+LL+A A Y++L ++ LP + S + K+ +LL H R Sbjct: 231 DSLLVANAGFEASGLYSEL----IIGRELPAELQRMIRNTLSSNRGKM----SLLRHTRT 282 Query: 299 SHNPKIVWLR 308 S + W+R Sbjct: 283 SRSAPHQWMR 292 >UniRef50_Q7MC61 Transcriptional regulator n=9 Tax=Gammaproteobacteria RepID=Q7MC61_VIBVY Length = 313 Score = 84.3 bits (207), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 88/327 (26%), Positives = 154/327 (47%), Gaps = 37/327 (11%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 +S T+DLNLL ++M+ RSV +AA+ + +T AVS +L +LR + DPLF+ G+ Sbjct: 10 QSEMTMDLNLLKTFDVVMKTRSVNEAAETLGITAPAVSHALNRLRDQYQDPLFIRQGRGI 69 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLD--KPHHQ---TPRGLKFELAAESPLMMIMLNALSK 117 +PT + + + E + +LLL+ K Q F L++ + +++L L Sbjct: 70 TPTNFAIELHAEIQEPL---SLLLNGAKSRQQFNPDTSHRTFRLSSHKDIDLMLLPPLMD 126 Query: 118 QIYQRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRE---LLSSLPL---AID 171 + Q P +KL D + LD E D R++ R+R+ +L+++P Sbjct: 127 HLAQHAP--NVKL-CADVEHLD-----ERD-----RQADLRTRKVDMILATVPFDEHGYH 173 Query: 172 YEVLFSDVPCVWL-RKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERT 230 E+LF ++P V + R+DHP + T F H+ ++ + +D++ E +R Sbjct: 174 NELLF-ELPLVMVCRQDHPRIQNTITHQQFFAEQHLLWETKRQNQDIVDSLALEPQPQRN 232 Query: 231 IAMSLPEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPF 290 IA ++ MAAQ D + T + + HQL + +PLPF K ++P Sbjct: 233 IAYKTGSSCNAIMMAAQTD-WICVTGQWHADLMAKAHQLQV--MPLPF-----KLNKLPI 284 Query: 291 TLLWHKRNSHNPKIVWLRETIKNLYAS 317 + WH + WL+ + A+ Sbjct: 285 YMTWHHSQQQDSGHQWLKSALMQATAT 311 >UniRef50_A0KG94 Transcriptional regulator, LysR family n=5 Tax=Gammaproteobacteria RepID=A0KG94_AERHH Length = 318 Score = 84.3 bits (207), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 88/321 (27%), Positives = 155/321 (48%), Gaps = 49/321 (15%) Query: 19 LMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTP----LMVSMEQN 74 LM + SVT+AA+ + ++ A+S +L +LR +F DPL V +P G+ PTP L + ++Q Sbjct: 18 LMAQGSVTRAAETLFISQPAMSHALNRLRTFFGDPLLVRTPQGMLPTPRAQRLHLGVQQA 77 Query: 75 LAEW-MQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQATIKLRNW 133 L Q+S+ + +P Q+ R +F L + +++ L +++ + P TI++R Sbjct: 78 LRLLEQQLSDEEVFEP-SQSKR--RFVLCTTDYVECVLIPPLIQRLKRLAPAVTIEIRIL 134 Query: 134 DYDSL--DAITRGEVDI-----------GFSGRE---SHPRSRELLSSLPLAIDYEVLFS 177 D+L + GE+D+ G+ G+E + P + + + LP+A Sbjct: 135 -RDTLPEAELASGEIDLVLGFDEYMQVPGYLGKETWLTEPLAGLVRADLPMA-------- 185 Query: 178 DVPCVWLRKDHPA-LHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLP 236 P + D PA L + +L + PH+ + +LD L+ LG RTI+++ Sbjct: 186 -APALAESGDEPAILAERISLAQLIEMPHVFHSPLGTSEASLDRYLKTLGFSRTISVNSQ 244 Query: 237 EFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVP---FTLL 293 + + + +Q D+LL+ P H PL +LPLP D VP + Sbjct: 245 SYMSAAAIVSQSDHLLV--LPSMVAELLASH-WPLKSLPLPED--------VPDYHLNCV 293 Query: 294 WHKRNSHNPKIVWLRETIKNL 314 WH ++ P +VWL++ +K L Sbjct: 294 WHPVHAQQPALVWLKDLMKEL 314 >UniRef50_A9F0I7 Transcriptional regulator, LysR family n=20 Tax=Proteobacteria RepID=A9F0I7_SORC5 Length = 319 Score = 84.3 bits (207), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 79/304 (25%), Positives = 132/304 (43%), Gaps = 33/304 (10%) Query: 22 ERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSMEQNLAEWMQM 81 E SVT AA+R+ ++PSA+S++LA+LR DPL V + GL PTP + + + ++ +Q Sbjct: 18 EGSVTGAARRLRLSPSAMSRALARLRETLGDPLLVRAGRGLVPTPRALELRERVSHLVQG 77 Query: 82 SNLLLDKPHHQTPRGLK-----FELAAESPLMMIMLNALSKQIYQRYPQATIK-LRNWDY 135 + +L +P + LK F L + AL ++ + P ++ + D Sbjct: 78 AEAVL-RPAEELD--LKRLVRTFTLRTSEGFVESFGPALIERTGAQAPGVRLRFVAKPDK 134 Query: 136 DSLDAITRGEVDI--GFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPALHQ 193 DS T G VD+ G ++ P R + LF D +R DHP Sbjct: 135 DSAPLRT-GAVDLETGVVDEDTSPELR-----------TQALFRDRFIGVVRSDHPLGRA 182 Query: 194 TWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQPDNLLL 253 + H+ +D L LG R + + F ++ +A D L+ Sbjct: 183 KITPARYAAGRHVVFSRRGVAKGRIDESLAALGLAREVVTIVGGFATAIALARATD--LI 240 Query: 254 ATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWLRETIKN 313 AT P ++ + + L + LPF E+ +LLWH R +P WLR++++ Sbjct: 241 ATVP---DHHTRSLRDGLFSFALPFAAP-----EITVSLLWHPRLDADPAHRWLRDSVRE 292 Query: 314 LYAS 317 + A Sbjct: 293 VVAG 296 >UniRef50_Q7WJY9 Probable LysR-family transcription regulator n=1 Tax=Bordetella bronchiseptica RepID=Q7WJY9_BORBR Length = 329 Score = 84.0 bits (206), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 67/231 (29%), Positives = 115/231 (49%), Gaps = 17/231 (7%) Query: 4 SITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLS 63 ++ +D+ LL L +LM ERSV++ A R++V+ AVS +LA+LR FDDPL + S G+ Sbjct: 21 AMDNIDIKLLRTLLVLMSERSVSRTADRLDVSQPAVSHALARLRILFDDPLLLRSRAGMV 80 Query: 64 PTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGLK--FELAAESPLMMIMLNALSKQIYQ 121 PT +E + + + L +P P + F L+A +++ + + + Sbjct: 81 PTDRASEIEARVRRLLAEYDALAHRPQPFDPSVSERHFVLSAPEYAEHLLMPPIFRHLRA 140 Query: 122 RYPQATIKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 P +++R D + + + + GEVD+ + +S L S+ L D V +D Sbjct: 141 HAPNIRVEVRAPDPERAYELLESGEVDLRIAWLRKPAQS---LRSMQLFQDRIVCIAD-- 195 Query: 181 CVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWA---LDNVLQELGRE 228 +DHPAL T +L FLRYPH + W + +D ++ LG++ Sbjct: 196 -----RDHPALDGTLSLADFLRYPH-ARPWGMGRNMSGRVIDEAVELLGKK 240 >UniRef50_B0C5B7 Transcriptional regulator, LysR-family n=1 Tax=Acaryochloris marina MBIC11017 RepID=B0C5B7_ACAM1 Length = 300 Score = 84.0 bits (206), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 73/316 (23%), Positives = 133/316 (42%), Gaps = 46/316 (14%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTP- 66 DLNLL+ L +L++ERSV+K A+R+ ++ AVS +L +LR DP+ V L + PTP Sbjct: 6 FDLNLLVVLHILLKERSVSKTAERLQLSQPAVSAALNRLRTALKDPILVRDGLQMVPTPR 65 Query: 67 ----------LMVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALS 116 ++ ++EQ LA+ +P + F +A +++ L Sbjct: 66 AEQLVEPVQAIVSAIEQTLAD---------PQPFDYSSISRTFRIATNDYGAFVLVPFLM 116 Query: 117 KQIYQRYPQATIKLRNWDYDSLDAITRGEVDIGFSG----RESHPRSRELLSSLPLAIDY 172 ++ + P T ++ + D A+ GE+D+ + R R Sbjct: 117 NRMQKIAPHLTFEIWDIALDVETALREGEIDLVIADAWTLRNCKCR-------------- 162 Query: 173 EVLFSDVPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIA 232 + LFS+ +R++HP + +D +L+ H + T +D L + ++R + Sbjct: 163 KTLFSETFTCLVRQNHPRVDTQLTMDDYLQEKHALVSARGRVTGNVDIALSQQNKQRQVQ 222 Query: 233 MSLPEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTL 292 ++LP M A D +++ A R + + L P+ D + Sbjct: 223 ITLPHILAIPAMMAATD-MIVTVATRIANRFAVDYHLQTFPPPITLD-------GFDIAM 274 Query: 293 LWHKRNSHNPKIVWLR 308 W R ++ I WLR Sbjct: 275 AWPHRMDNDTAIRWLR 290 >UniRef50_B0KG68 Transcriptional regulator, LysR family n=9 Tax=Pseudomonas RepID=B0KG68_PSEPG Length = 324 Score = 84.0 bits (206), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 80/323 (24%), Positives = 147/323 (45%), Gaps = 30/323 (9%) Query: 2 KKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLG 61 + + D+NL++ + LMQER++T+AA+++ V VS +LA+LRA F+DPL V Sbjct: 18 RNELRKADINLMVVFEALMQERNLTRAAEKLFVAQPTVSAALARLRAMFNDPLLVRVGNR 77 Query: 62 LSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTP--RGLKFELAAESPLMMIMLNALSKQI 119 + P+ + + L + ++ L H P + F + + +L L + + Sbjct: 78 MEPSARAEEVIKYLTPALDAMSVALSLTHDFDPLTSKMTFRIGLSDDVESGLLPPLLRAL 137 Query: 120 YQRYPQATIKLRNWDYDSL-DAITRGEVDIGFSGRESHPRS--RELLSSLPLAIDYEVLF 176 P + +++ DY + D + G+V +G S + P + R++L ++ + Sbjct: 138 RVEAPNVVVVVQHVDYWRIPDLLAAGDVTVGISQTKGLPANAKRKVLRTMQGRV------ 191 Query: 177 SDVPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLP 236 +R D A T LD F PH+ + + +D+ L+E+GRER + +S+P Sbjct: 192 -------VRADKSATPLT--LDEFCARPHVQVSPTANTQGVVDDWLKEIGRERKVVLSVP 242 Query: 237 EFEQSLFMAAQPDNLLLATAPRY-CQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWH 295 +F + A D LLA P Y Q + L A LPF+ + + ++W Sbjct: 243 QFSSLPAILAGTD--LLACCPDYAAQGMERWGNLQ--AEQLPFETTA-----LELAMVWL 293 Query: 296 KRNSHNPKIVWLRETIKNLYASM 318 +P WLR +++ + Sbjct: 294 STTDSDPAERWLRSRLEHYMGGV 316 >UniRef50_A6EYC4 LysR family regulatory protein n=1 Tax=Marinobacter algicola DG893 RepID=A6EYC4_9ALTE Length = 300 Score = 84.0 bits (206), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 74/314 (23%), Positives = 138/314 (43%), Gaps = 23/314 (7%) Query: 1 MKKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPL 60 MK ++ ++DLNLL +M+ +++AA + ++ A+S +L +LR DPLFV + Sbjct: 1 MKLNLRSVDLNLLPVFDAIMEAGQLSRAADSLGMSQPAISAALQRLRHTLGDPLFVRTHQ 60 Query: 61 GLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQ 118 G+ PTP + ++L++ + LD + P +F + + M++L L + Sbjct: 61 GMVPTPRARELHRSLSQQLGAMRDTLDPANRFVPGTSQRRFRVLSNDYFEMVVLPTLLTR 120 Query: 119 IYQRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSD 178 + P +++ D + E D+ ++ + +VL ++ Sbjct: 121 LRSEAPNVVVEVALAGDDMPQRLYTAEADLAVDA----------FATENDRLRRQVLLAE 170 Query: 179 VPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEF 238 V RKDHP L + FL H+ + +++ LD +L E G +R + +F Sbjct: 171 RLAVVARKDHPDLWDDCSKQQFLDAEHV-VLPDRNRRLPLDQILNEPGWQRRTGARVTQF 229 Query: 239 EQSLFMAAQPDNLLLATAP-RYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKR 297 L ++ D ++AT P R Q Y + L LP P + +P LLW Sbjct: 230 ASMLATCSRSD--MIATVPERLAQQYAR--AFGLKTLPFPVEVP-----PLPVYLLWAPV 280 Query: 298 NSHNPKIVWLRETI 311 ++P +W R+ + Sbjct: 281 MDNDPAHIWFRQRL 294 >UniRef50_B4E7M9 LysR family regulatory protein n=1 Tax=Burkholderia cenocepacia J2315 RepID=B4E7M9_BURCJ Length = 299 Score = 83.6 bits (205), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 82/312 (26%), Positives = 138/312 (44%), Gaps = 32/312 (10%) Query: 9 DLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFV--NSPLGLSPTP 66 D+ LL+ L +L++E +VT+AA+R+ ++ A+S LA+LR DDPL V G+ TP Sbjct: 5 DMGLLVSLDVLLEEANVTRAARRLAISQPALSAQLARLRQVLDDPLLVPAERGRGMRLTP 64 Query: 67 LMVSMEQNLAEWMQMSNLLLDKPHHQTPRGLK--FELA----AESPLMMIMLNALSKQIY 120 ++ L E + L++ P+ P K F +A A + + ++ + KQ Y Sbjct: 65 RAAQLKSPLHELLTRLEDLVEAPYAFDPSTAKRDFTIALNDNAAMTIGLDLIECIRKQSY 124 Query: 121 QRYPQATIKL-RNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 A +++ R+ + LD RG +D+ R + +P + L D Sbjct: 125 AGIRLAMLQIPRD---EVLDLAARGRIDLVIGTR----------AFMPPGLRTHDLVYDR 171 Query: 180 PCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFE 239 V RK HP L+ + Y H+ + S +D+ L ELG R +S+ ++ Sbjct: 172 FQVAQRKGHPRGTAAMTLEQYCAYEHVLVSTNGSYHSGIDDFLAELGHYRHTTVSV-QYY 230 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 ++ + N L R+ ++ H + LP FD Q L+V WH R Sbjct: 231 TAVPPILERTNCLATLPERFLHRFD--HMIDRFDLPFAFDPFQ---LQVG----WHPRFD 281 Query: 300 HNPKIVWLRETI 311 + WLRE + Sbjct: 282 EDLGHQWLREQL 293 >UniRef50_A5W6Q9 Transcriptional regulator, LysR family n=12 Tax=Pseudomonas RepID=A5W6Q9_PSEP1 Length = 326 Score = 83.6 bits (205), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 96/332 (28%), Positives = 144/332 (43%), Gaps = 56/332 (16%) Query: 4 SITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLS 63 +I+ DLNLL +L++E++V++AA+R+ +T VS +LA+LR DPL V + Sbjct: 27 NISNFDLNLLRVFDMLLREQNVSRAAERLALTQPTVSNALARLRDQLGDPLLVRVGRRMR 86 Query: 64 PTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRY 123 PTP +++E + +Q L G FE + I L +Q+ Sbjct: 87 PTPRALALEGPIRAALQQIEQTLGT-------GDGFEPQRSHRQLRIALTDFVEQLCMPP 139 Query: 124 PQATIKLR--NWDYDSL--------DAITRGEVDIGFSGR--------ESHPRSRELLSS 165 A ++L N D + +A+ RG++D+ GR HP RE L Sbjct: 140 LLARLELLAPNVRIDVVHLAPNLPAEALDRGDLDLVL-GRFDEVPARFTRHPWRRETLQ- 197 Query: 166 LPLAIDYEVLFSDVPCVWLRKDHPAL--HQTWNLDTFLRYPHISICWEQSDTWALDNVLQ 223 + LR+ HP L Q +LD FL HI + Q+ +D L Sbjct: 198 ----------------IALRQQHPHLVPGQALDLDAFLGLRHIWVHGGQTRGM-VDQWLA 240 Query: 224 ELGRERTIAMSLPEFEQSLFMAAQPDNLLLATAPRYCQYYNQL-HQLPLVALPLPFDESQ 282 E G R IA + P + Q+ +AA D + PR Q Q H LPL LPF Sbjct: 241 EQGLTRQIAYTTPNYLQAAHLAAATD--MCVVLPR--QLAQQFAHLLPLAVYELPF---A 293 Query: 283 QKKLEVPFTLLWHKRNSHNPKIVWLRETIKNL 314 + E+ L H++ H+P + WL E I L Sbjct: 294 LEPFELEVVHLSHRQ--HDPALAWLVEQILTL 323 >UniRef50_Q46T42 Regulatory protein, LysR:LysR, substrate-binding n=2 Tax=Burkholderiaceae RepID=Q46T42_RALEJ Length = 330 Score = 83.6 bits (205), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 74/312 (23%), Positives = 134/312 (42%), Gaps = 22/312 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 D NLL +++ERSVT+AA ++ +T SA+S +L +LR +FDDPLFV + G++PT Sbjct: 6 FDYNLLTVFDAMLRERSVTRAAAQLGLTQSAMSHALNRLREFFDDPLFVKTAAGMTPTIK 65 Query: 68 MVSMEQNLAEWMQM--SNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQ 125 ++ + + + M + +L F L ++ L L K++ P Sbjct: 66 AEALSETVLDVMTAMRTRVLPQASFDPATMQRTFTLCMTDMGELVFLPPLMKRLRVVAPH 125 Query: 126 ATIKLRNWDYDSLDA-ITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 ++ ++ + G+ D+ ++ P S + + LF + Sbjct: 126 CKLRTLQVPVPQIEGLLASGDADLLLGSVQTAPES----------LFRQQLFMHGFVTIV 175 Query: 185 RKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEF-EQSLF 243 + + ++ F PH+++ + + D + G R I + P F L Sbjct: 176 STKNRQVRDALTIEQFESMPHVTVSLAGRTSPSYDAAFESHGLRRNIYLHTPHFLSIPLL 235 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 M QP+ L+AT P+ + N + +V + P L + WH R H+P Sbjct: 236 MEQQPE--LIATVPQ--ELANVFSRYGIVRVVKPPVVLPPYAL----SQYWHPRFHHDPA 287 Query: 304 IVWLRETIKNLY 315 IVWLR+ +K + Sbjct: 288 IVWLRQLVKQTF 299 >UniRef50_A0KIB7 Transcriptional regulator, LysR family n=2 Tax=Aeromonas RepID=A0KIB7_AERHH Length = 303 Score = 83.6 bits (205), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 78/312 (25%), Positives = 146/312 (46%), Gaps = 32/312 (10%) Query: 4 SITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLS 63 ++ +DLNLL+ L+ L++ER+ TKAA+R+ ++ AVS++LA+LR +DDPL + +P G+ Sbjct: 2 NLRGVDLNLLVVLKALLEERNTTKAAERLAMSQPAVSRALARLRLLYDDPLLIRTPQGME 61 Query: 64 PTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGLK--FELAAESPLMMIMLNALSKQIYQ 121 PT ++ L E + P P + + A + + +M+ +L ++ Q Sbjct: 62 PTARAEALLLPLREILHDIEQTFSPPEQLDPAQFEGVLRIGAHTYVEYVMMPSLLARLQQ 121 Query: 122 RYPQATIKLR--NWDYDSLDAITRGEVDIGFSGRESHP-RSRELLSSLPLAIDYEVLFSD 178 + P I + N DY+S + G + + S ++ P R R + LF D Sbjct: 122 QAPNLRIHMVPLNADYES--QLDEGVISMVISKQDEVPGRFRRI-----------PLFED 168 Query: 179 VPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEF 238 + HP Q +++F + H+ + S+ +D++L G R + + F Sbjct: 169 KLICAAHRSHPLQGQVLCIESFAQAQHLLVAPRGSEGGIVDDLLAAHGMTRHTPLIVQSF 228 Query: 239 EQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVP---FTLLWH 295 + F+ P LL T+P + L +PL+ L + + +P +L+ H Sbjct: 229 LAAPFIL--PCAPLLLTSP--ARVLRPL--MPLLDL-----VEYETRFALPTFEVSLIRH 277 Query: 296 KRNSHNPKIVWL 307 +R+ +N + W Sbjct: 278 RRDDNNAMLNWF 289 >UniRef50_A8H854 Transcriptional regulator, LysR family n=1 Tax=Shewanella pealeana ATCC 700345 RepID=A8H854_SHEPA Length = 303 Score = 83.6 bits (205), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 65/239 (27%), Positives = 114/239 (47%), Gaps = 23/239 (9%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 ++ LDLNLL ++L++ ++ KAA+ ++++ AVS++L +LR +F D LFV S GL P Sbjct: 1 MSQLDLNLLKVFRVLIEVKNTRKAAEILHLSQPAVSRALRRLRDYFGDELFVRSAHGLEP 60 Query: 65 TPLMVSMEQNLAEWMQMSNLLLDKPHHQTPR--GLKFELAAESPLMMIMLNALSKQIYQR 122 T + + L E M L+ P+ K +A + ++ L K + ++ Sbjct: 61 TSKALVIGSRLPEAMDQLFEALNVKEEFEPQFYSGKVTIAVNGFIAHWLVPPLIKALTEK 120 Query: 123 YPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAID----YEVLFSD 178 P I + NW+ + D I GE+ + ++ PL + E L SD Sbjct: 121 APNMEIYMANWEESTSDKIINGEIQLA-------------INYFPLELTKQLIQEKLGSD 167 Query: 179 VPCVWLRKDHPALHQTWNLDTFLRYP---HISICWEQSDTWALDNVLQELGRERTIAMS 234 V RKDHP + + F +YP HI W ++ + ++ L++LG + + +S Sbjct: 168 DFVVLCRKDHPFQKEVIGAEDFPKYPLASHIVPGWNETKNFTVE-ALKKLGYKPRVQLS 225 >UniRef50_B3YF82 Transcriptional regulator, LysR family n=2 Tax=Salmonella enterica subsp. enterica serovar Kentucky RepID=B3YF82_SALET Length = 306 Score = 83.6 bits (205), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 82/304 (26%), Positives = 142/304 (46%), Gaps = 34/304 (11%) Query: 18 LLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSMEQNLAE 77 +L+ ER+VT+ +R++++ SA S +L++LR +FDD L V + TP + + + + Sbjct: 16 VLLAERNVTRTGERVHLSQSATSGALSRLREFFDDQLLVQVGQRMELTPFAEMLVEEVHD 75 Query: 78 WMQMSNLLLDKPHHQTP----RGLKFELAAESPLMMIMLNALSKQIYQRYPQATIKLRNW 133 + ++DK P R + ++ S ++M NA++ I ++ P + + + Sbjct: 76 IISKCEAIVDKNQKFDPETSTRTFRLNISDASA-TVVMNNAITL-IQKQAPHVRLDISSI 133 Query: 134 DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSD--VPCVWLRKDHPAL 191 +D ++IG P + L+SS A E LF D V VW +P Sbjct: 134 ----IDGPISEYLNIGVIDLIVTPTN--LVSSQHPA---EYLFDDQYVCVVW--SGNPLC 182 Query: 192 HQTWNLDTFLRYPHISICWEQSDTWALDNV-LQELGRERTIAMSLPEFEQSLFMAAQPDN 250 NLD +L HI + + WALD V + + G +R I + +P F S+ M Sbjct: 183 QSGINLDNYLSSGHIVARFSKMIGWALDEVFISQSGYQRRIDIIVPSF--SMLMTQLIGT 240 Query: 251 LLLATA-PRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPF--TLLWHKRNSHNPKIVWL 307 L+AT R+ +YY++ LP+ P P + PF L WH+ + + I WL Sbjct: 241 NLIATVHERFARYYSKY--LPVEIFPCPI-------ISEPFDMKLQWHRHHDGDLGIQWL 291 Query: 308 RETI 311 R+ + Sbjct: 292 RQIL 295 >UniRef50_D0YJS8 Transcriptional regulator, LysR family n=2 Tax=Klebsiella RepID=D0YJS8_KLEVA Length = 319 Score = 83.2 bits (204), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 85/316 (26%), Positives = 142/316 (44%), Gaps = 29/316 (9%) Query: 1 MKKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPL 60 M + + +DLNLL + + + + AAK +N+TPSA+S+S+ KLRA F DPLF+ Sbjct: 22 MFRILRNIDLNLLTIFEAVYVHKGIVNAAKILNITPSAISQSINKLRALFPDPLFIRKGQ 81 Query: 61 GLSPTPLMVSMEQNLAEWMQMSNLLLD---KPHHQTPRGLKFELAAESPLMMIMLNALSK 117 G+ PT + Q ++ M+ LD PH Q +A + +++ ++ Sbjct: 82 GVMPTAYATHLHQYISRGMEAFLSALDIAGSPHQQR----VITIATTPGMGALLIPIVAS 137 Query: 118 QIYQRYPQATIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLF 176 + +PQ I L N D+ + + +VD+ ++H S + AI + VL+ Sbjct: 138 ALKPAFPQ--ILLHNIAITDAARQLDQRQVDLLI---DTHLHSGQ-------AISHHVLY 185 Query: 177 SDVPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLP 236 D ++ R +HPALH + +Y + E L LQE ER S Sbjct: 186 QDRVRMYCRAEHPALHGPQDEAHLAQYEFALLLPEGQRYPTLHRRLQEEMGERRCGFSTF 245 Query: 237 EFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQL-PLVALPLPFDESQQKKLEVPFTLLWH 295 M A+ D L L T + + + +L PL L F Q +K+ V L ++ Sbjct: 246 NLLTQAAMIAESDMLGLTTE----RLFAMVSRLWPLQT--LDFHSLQDEKINV--ALHYN 297 Query: 296 KRNSHNPKIVWLRETI 311 K++ P + + ET+ Sbjct: 298 KQSGKEPLLKEIIETV 313 >UniRef50_A6FY23 Transcriptional regulator, LysR family protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6FY23_9DELT Length = 339 Score = 83.2 bits (204), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 77/301 (25%), Positives = 131/301 (43%), Gaps = 31/301 (10%) Query: 21 QERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSMEQNLAEWMQ 80 Q SVT AA+R+ ++ AVS +LA+LR F DPL V + G+ TP + + + + Sbjct: 21 QTSSVTGAARRLGLSTPAVSHALARLRERFGDPLLVRAGRGMVLTPRAEQLRPRVRDALS 80 Query: 81 MSNLLLDKPHHQTPRGLK--FELAAESPLMMIMLNALSKQIYQRYPQATIKLRNWDYDSL 138 ++ L+ + P P ++ F L+ ++ + ++ P +++ D Sbjct: 81 LATLVFEDPGAFEPASMERSFTLSMTDYVLRVFGGPFEARVRAAAPGVDLRVIVNAVDDA 140 Query: 139 DAITRGEVD--IGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPALHQT-- 194 + + G+ D +G G +LP + + S+ +R+ HP L T Sbjct: 141 ERLRAGDTDLVVGIYG------------ALPPELRTRAIISERLVCVVREAHPVLAPTKR 188 Query: 195 -WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQPDNLLL 253 L F+ H+ I +D+ L ELG R +A ++P F+ +L M A D LL Sbjct: 189 RLTLRQFVTLEHVQIAPRGQPGGYVDDRLAELGHARRVARAVPFFQLALEMTASSDYLLT 248 Query: 254 ATAPRYCQYYNQLH-QLPLVALPLPFDESQQKKLEVPFTL--LWHKRNSHNPKIVWLRET 310 + + QL +L L L P + LE P+ L +WH R + WLRE Sbjct: 249 VSE----RIARQLGPELGLRVLEPP----SELGLE-PYALSMVWHPRFDADAGHRWLREQ 299 Query: 311 I 311 + Sbjct: 300 L 300 >UniRef50_Q1ZAU1 Transcriptional regulator, LysR family protein n=1 Tax=Photobacterium profundum 3TCK RepID=Q1ZAU1_PHOPR Length = 319 Score = 83.2 bits (204), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 78/316 (24%), Positives = 133/316 (42%), Gaps = 36/316 (11%) Query: 9 DLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLM 68 DLNLL+ L L++E+ V++ A +N++ + +S L KLR FDDPL + S G+ + L Sbjct: 13 DLNLLVFLAALLEEKHVSRTAVMLNISQATMSYHLQKLRKEFDDPLLIKSKNGMVLSNLG 72 Query: 69 VSMEQNLAE-WMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQAT 127 +++ L++ + Q+ + + + + + +L L QI P Sbjct: 73 AALQVPLSQLFNQLDSTVYKRTFLPADAEGTIRFCTQDASLKHLLIPLLSQISVAAPNLC 132 Query: 128 IKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKD 187 I+L W +D +A+ G++D+ F G L S P +I ++ V D Sbjct: 133 IELVEWPFDIFNALENGDIDVVFGG----------LGSAPPSIYGVKYYTSRLSVVTHVD 182 Query: 188 HPALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAA 246 HP + L+ +PH+ I +D ++ G R I + P + Sbjct: 183 HPFTRISSPKLEDVFSFPHVRIYPGAEGERLVDEAARKQGINRPITLKTPSY-------- 234 Query: 247 QPDNLLLATA--PRYCQYYNQLHQLPLVALPLPFDESQ------QKKLEVPFTLLWHKRN 298 N+ L T R+ +N+ LV + D S+ + EV L W+ R Sbjct: 235 ---NIALETIKLGRHIACFNR-----LVVSTMAQDSSELVITDVEGLPEVDIYLYWNARV 286 Query: 299 SHNPKIVWLRETIKNL 314 S P +W RE I L Sbjct: 287 SKEPMHIWFREQINML 302 >UniRef50_P55733 HTH-type transcriptional regulator syrM 2 n=13 Tax=Proteobacteria RepID=SYRM2_RHISN Length = 339 Score = 83.2 bits (204), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 77/308 (25%), Positives = 132/308 (42%), Gaps = 19/308 (6%) Query: 4 SITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLS 63 ++ ++DLNLL+ L+ L+Q R++T AA+ + + A+S++L++LR F+D L V GL Sbjct: 28 NLASVDLNLLVELEALLQYRNITHAAQHVGRSQPAMSRALSRLRDMFNDDLLVRGSSGLV 87 Query: 64 PTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRY 123 PTP + Q L + L+ K +A +++L L ++ +R Sbjct: 88 PTPQAEHLAQMLPSVLNAIRELVSCSSGLRDLRSKVTMAMPDHQSLVLLPYLLPRLGERV 147 Query: 124 PQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVW 183 P I +L + +GE+D + + P L++D Sbjct: 148 PHVDIVTEPLLDGALRRLEQGEIDFAIGQ----------IGAAPPGYLRRGLYADRFTCL 197 Query: 184 LRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 LR DHPAL Q W++ TF H SI + ++ L V L R + P ++ Sbjct: 198 LRHDHPALEQEWSVGTFAALRHASIASDSNE--GLGQVYDGLVR---FGLPGPIVVSNVL 252 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 AA +++A N++ LPL + + L+WH+R H+ + Sbjct: 253 TAA----VVVAMTDLVLMIPNRVATRVATMLPLAIVDPPVELKPYEVALIWHQRCHHDLE 308 Query: 304 IVWLRETI 311 LR I Sbjct: 309 HRVLRREI 316 >UniRef50_A3Y6R5 Transcriptional regulator, LysR family protein n=2 Tax=Gammaproteobacteria RepID=A3Y6R5_9GAMM Length = 312 Score = 83.2 bits (204), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 74/311 (23%), Positives = 137/311 (44%), Gaps = 31/311 (9%) Query: 12 LLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSM 71 LL L ++Q R++T +A +NVT SA+SK+L+++R F D + + T + Sbjct: 6 LLPALVSILQTRNLTASAAELNVTQSAMSKTLSQIREAFHDKILIREGNQFVLTQKGEQL 65 Query: 72 EQNLAEWMQMSNLLLDKPHHQTPRGL-----KFELAAESPLMMIMLNALSKQIYQRYPQA 126 + L + MQ LD + L +F +A+ + ++ +++ ++ P Sbjct: 66 KTQLPDLMQT----LDGLYAPNTMELELCQRRFSIASSDYVAQAVVPMITRVMHDEAPNV 121 Query: 127 TIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRK 186 +++ + W L + +D+ + E P + + D V LR+ Sbjct: 122 SLEFQAWQPSKLTELAETSIDLVTTIAEEVPEN----------LQGRWCAEDELVVMLRQ 171 Query: 187 DHPALH--QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 HP L+ Q ++LD + + HI I LD L GR+R + + +P ++ ++ + Sbjct: 172 GHPILNKAQAFSLDDYCQSKHILISGGGDKNSPLDQALLAEGRQRQVLIQVPFYQAAIEL 231 Query: 245 AAQPDNLLLATAPRYCQY-YNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 D LL T P + + Q H + L LP+ +Q + LLWH ++ H+P+ Sbjct: 232 VLNTDALL--TLPMHIAGDFAQRHDVTLRRLPISLVPNQ-------YYLLWHTKHHHDPE 282 Query: 304 IVWLRETIKNL 314 W RE L Sbjct: 283 HKWFRELCTGL 293 >UniRef50_A6EW06 Transcriptional regulator n=2 Tax=Marinobacter RepID=A6EW06_9ALTE Length = 315 Score = 82.8 bits (203), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 77/316 (24%), Positives = 133/316 (42%), Gaps = 28/316 (8%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 + T +L LL +M ERSVT+AA R+ +T AVS +++++R ++DPLFV + P Sbjct: 1 MKTQELQLLYIFDAIMTERSVTRAADRLAMTQPAVSNAISRMRQIWNDPLFVRKGRNIEP 60 Query: 65 TPLMVSMEQNLAEWM-QMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRY 123 T +S+ + + M ++N + F +A ++ ++ L + + Sbjct: 61 TSYALSLWDQVGDPMFALTNAVSATQFDPASARRTFRIAVTDVIVEMIWRQLIDLLEREA 120 Query: 124 PQATIKLRNWD-YDSLDAITRGEVDIGFSGRESHP---RSRELL-SSLPLAIDYEVLFSD 178 P + + S D + VD+ H RS LL S LA Sbjct: 121 PGVDVHAVPYTPEGSYDDLRSAHVDLAIGVLNQHDYSLRSTWLLDSGFVLA--------- 171 Query: 179 VPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEF 238 +R DHP + ++ FL H+ + ++D+ L + G+ R IA ++ F Sbjct: 172 -----MRADHPLAGRQITMEEFLEARHLLVTMSGDAHGSVDSYLDQKGQSRRIAATMNHF 226 Query: 239 EQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRN 298 S+ + NL+ A Q + L + LP D + L+WH R+ Sbjct: 227 A-SVPQVLRESNLIAAVPELISQDCGFVDGLWMGELPFDVDPTS-------LYLIWHARH 278 Query: 299 SHNPKIVWLRETIKNL 314 P I+W+R I+ L Sbjct: 279 DREPGIIWIRNHIERL 294 >UniRef50_Q87I72 Putative transcriptional regulator, LysR family n=7 Tax=Vibrio parahaemolyticus RepID=Q87I72_VIBPA Length = 332 Score = 82.8 bits (203), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 70/254 (27%), Positives = 123/254 (48%), Gaps = 35/254 (13%) Query: 2 KKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLG 61 KK + LDLNLL +++ +E+ AAKR+N+T AVS+++A+LR F+DPLFV + G Sbjct: 22 KKPLHNLDLNLLKIFRVVSEEKKTVAAAKRLNITQPAVSRAMARLREHFNDPLFVRTRYG 81 Query: 62 LSPTPLMVSMEQNLAEWM-QMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNA------ 114 L PT + +L + M +SNL+L+ +F + S + I +N Sbjct: 82 LKPTDKGQLLSDSLPKIMDDLSNLILELD--------EFSPESSSANIKIAINGFFGVSF 133 Query: 115 ---LSKQIYQRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAID 171 L ++ P TI+ +W +++ + GE+D+G ++P L+++P + Sbjct: 134 PAKLHLKLLDIAPNITIETESWSSNTISKLINGELDLGI----NYP-----LNNVPKELQ 184 Query: 172 YEVLFSDVPCVWLRKDHPALHQTWNLDTFLRYPHISIC---WEQSDT----WA-LDNVLQ 223 + L +D + R HP Q + + YP ++ W ++ T WA +N+ Sbjct: 185 TKHLATDEFQILARDAHPLSDQAIDCNDLSLYPIVTAIVPDWNENRTLIECWAERENIET 244 Query: 224 ELGRERTIAMSLPE 237 E + +SL E Sbjct: 245 ETAFRSSSILSLLE 258 >UniRef50_Q1XGL2 Transcriptional activator NahR n=3 Tax=root RepID=Q1XGL2_PSEPU Length = 374 Score = 82.8 bits (203), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 79/307 (25%), Positives = 122/307 (39%), Gaps = 37/307 (12%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 LDLNLL+ L+ +R V+ A+ + +T AVS +L +LR DPLFV + G+ PTP Sbjct: 6 LDLNLLVVFNQLLVDRRVSITAENLGLTQPAVSNALKRLRTSLQDPLFVRTHQGMEPTPY 65 Query: 68 MVSMEQNLAEWMQ-MSNLLLDKPHHQTPRGL----KFELAAESPLMMIMLNALSKQIYQR 122 + + + M + N L HH++ L F LA + + L + + Sbjct: 66 AAHLAEPVTSAMHALRNAL---QHHESFDPLTSERTFTLAMTDIGEIYFMPRLMDVLAHQ 122 Query: 123 YPQATIK-LRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPC 181 P I +R+ + A+ G VD+ LL +L L + Sbjct: 123 APNCVISTVRDSSMSLMQALQNGTVDLAVG----------LLPNLQTGFFQRRLLQNHYV 172 Query: 182 VWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQS 241 RKDHP + L+ F Y H+ + + +D + +G R I + +P F Sbjct: 173 CLCRKDHPVTREPLTLERFCSYGHVRVIAAGTGHGEVDTYMTRVGIRRDIRLEVPHFAAV 232 Query: 242 LFMAAQPDNLLLATAP----RYCQYYNQLHQLPL-VALPLPFDESQQKKLEVPFTLLWHK 296 + + D LLAT P C L LP V LP E+ + WH Sbjct: 233 GHILQRTD--LLATVPIRLADCCVEPFGLSALPHPVVLP-----------EIAINMFWHA 279 Query: 297 RNSHNPK 303 + P Sbjct: 280 KVPQGPS 286 >UniRef50_A3VAM0 Nodulation protein d1 n=1 Tax=Rhodobacterales bacterium HTCC2654 RepID=A3VAM0_9RHOB Length = 312 Score = 82.4 bits (202), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 84/335 (25%), Positives = 144/335 (42%), Gaps = 47/335 (14%) Query: 1 MKKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPL 60 M LDLNLL+ L +L++E++V++AA+++ ++ SA S +LA+LR +F+D L V Sbjct: 1 MDMRFKGLDLNLLVALDVLLREKNVSRAAEKLFLSQSATSGALARLREYFNDDLLVQVGR 60 Query: 61 GLSPTPLMVSMEQNL-AEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMI-MLNALSKQ 118 + TP ++ + + +Q+ ++ P ++ S + I +L ++ Sbjct: 61 QMVLTPRATALSGKVRSALVQIDGTIIQSPEFDPSTAVRILRIISSDFITISVLREAVRE 120 Query: 119 IYQRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDY--EVLF 176 I + P TI ++ + I RGEVD+ L+ L ++ D+ E F Sbjct: 121 IGKSAPGLTIDIQQPANKPHEKIERGEVDL------------LLMPELYISPDHPSEQFF 168 Query: 177 SDVPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQS----DTWALDNVLQELGRERTIA 232 +D V + T D F H ++ +E + W + N + GRER IA Sbjct: 169 TDDYVVIAWSGNTQFGDTITEDQFFAARHATVMFESHTPSYEAWFIQN---KDGRERDIA 225 Query: 233 MSLPEFEQSLFMAAQPDNLLL---ATAPRYCQYYNQLHQLPLVALPLPFD-----ESQQK 284 + + F FM D L L + A + + Q+PL L P D ES Q Sbjct: 226 IVVGSFSALPFMIEGTDYLALMHRSMADIFAR------QMPLRLLRCPIDIPPLVESIQ- 278 Query: 285 KLEVPFTLLWHKRNSHNPKIVWLRETIKNLYASMA 319 WH + + + W+RE I +A Sbjct: 279 ---------WHTYSDGDECLAWVREKIHEQARGLA 304 >UniRef50_C9QF24 Transcriptional regulators LysR family n=1 Tax=Vibrio orientalis CIP 102891 RepID=C9QF24_VIBOR Length = 305 Score = 82.4 bits (202), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 82/320 (25%), Positives = 145/320 (45%), Gaps = 25/320 (7%) Query: 1 MKKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPL 60 M K +DLN L +L QER++ AA+R+ + A+S+ L+KLR +FDD LFV P Sbjct: 1 MGKQNGQMDLNALRIFFVLYQERNMRLAAERLFSSQPAMSQHLSKLRTYFDDELFVKVPT 60 Query: 61 GLSPTPLMVSMEQNLAE-WMQMSNLLLDKPHHQTPRGLKFELA-AESPLMM-IMLNALSK 117 GL PT ++ Q+ E + Q+ N + P ++ + A SPL+ I+ + K Sbjct: 61 GLEPTSFADNLYQSSYELFTQLENSIATSQAFD-PSNIEHTVVLAVSPLLAPIIGHQFFK 119 Query: 118 QIYQRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFS 177 +I++ P+ I + W +LD + +V +G + +++S + VL Sbjct: 120 RIHELAPKLKILIHQWSKQTLDQLKSDQVQLGI--------NYQIVSEDKQIREKRVLQD 171 Query: 178 DVPCVWLRKDHPALHQTWNLDTFLRYPHISIC---WEQSDTWALDNVLQELGRERTIAMS 234 + C+ +RKDHP + ++ +YP +I W ++A + V G + + + Sbjct: 172 NFRCL-VRKDHPHISTIITMEQAAQYPFTTIIASDWNSQLSYA-EQVFAAKGFDVEV-LY 228 Query: 235 LPEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLW 294 EF S+ Q + + + Y ++ N P V + F E L+ Sbjct: 229 RSEFPASILDVVQNSDTIFPCSQLY-RFTN-----PEVFRSIEF-EGNPDVLKPSICFYH 281 Query: 295 HKRNSHNPKIVWLRETIKNL 314 H +N +P WL E + + Sbjct: 282 HYKNDKDPLTQWLIEVLTEV 301 >UniRef50_A8GKS5 Transcriptional regulator, LysR family n=1 Tax=Serratia proteamaculans 568 RepID=A8GKS5_SERP5 Length = 314 Score = 82.4 bits (202), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 84/329 (25%), Positives = 140/329 (42%), Gaps = 48/329 (14%) Query: 4 SITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLS 63 ++ +DLNLL+ + ++RSV A + + ++ AVS +LA+LR FDDP+FV + Sbjct: 2 NLKNVDLNLLVVFDAIFRQRSVGLAGQMLGISQPAVSHALARLRQLFDDPMFVRINNEMR 61 Query: 64 PT----PLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQI 119 PT LM S+E+ L+ M ++L P G F+ AA + + + + +Q Sbjct: 62 PTDRASELMPSVERVLS--MIRDDVL-------QPVG--FDPAANRRTLTLCMPDIGEQY 110 Query: 120 Y---------QRYPQATIKLRNWDYDSLD-AITRGEVDIGFSGRESHPRSRELLSSLPLA 169 + Q P + L+ A+ G VD+ L A Sbjct: 111 FLPPLINHLAQVAPGMAVVSHELAPAQLEEALESGRVDLAIG----------YFPDLRRA 160 Query: 170 IDYEV-LFSDVPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRE 228 + Y+ LF C +R+ HP + +T +L FL+ H++ + ++E G Sbjct: 161 VFYQQRLFYSGFCCAVRQGHPQIGKTLSLPQFLQAEHVTARLRIRSQEIAEQAMREQGIV 220 Query: 229 RTIAMSLPEFEQSLFMAAQPDNLLLAT--APRYCQYYNQLHQLPLVALPLPFDESQQKKL 286 R + + F + AQ D L T A + Q ++H P V P+P Sbjct: 221 RNVKLQTSHFLSLTQIIAQTDLLATVTYEAAQLLQAAGKVHIYP-VPFPIP--------- 270 Query: 287 EVPFTLLWHKRNSHNPKIVWLRETIKNLY 315 + P WH+R H+ WLR I+ L+ Sbjct: 271 QFPVMQYWHERAHHDRGNQWLRGEIRGLF 299 >UniRef50_A1U1I0 Transcriptional regulator, LysR family n=67 Tax=Proteobacteria RepID=A1U1I0_MARAV Length = 336 Score = 82.4 bits (202), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 83/329 (25%), Positives = 146/329 (44%), Gaps = 48/329 (14%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 I+ +DLNLL+ L +L++ER+VTKAA + +T A+S L +LR F DPL V + G++ Sbjct: 3 ISRVDLNLLVYLDVLLRERNVTKAANHLGITQPAMSNGLRRLRDLFGDPLLVRTSEGMTA 62 Query: 65 T-------PLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSK 117 T PL+ + ++ + +Q + R + + AES LM +L + Sbjct: 63 TERARELQPLVRGILSDIEQAVQEKTPFAAGESQRVFRIMASDY-AESCLMPRVL----R 117 Query: 118 QIYQRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFS 177 +I Q P T+ + S + +G +D+ + +P + + L++ Sbjct: 118 RIRQEAPHVTLDVLTPSDVSFLDVEQGRLDMAIN----------RFDKIPQSFHQKTLWT 167 Query: 178 DVPCVWLRKDHPALHQTWNLDTFLRYPHI---------SICWEQSDTWAL---DNVLQEL 225 + + +P L + + LDT+L HI + D L D L + Sbjct: 168 EYFACLMNARNPILKEPFTLDTYLDASHIWVSKTGFGVGVGVNPKDVQRLGWVDEALGRM 227 Query: 226 GRERTIAMSLPEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKK 285 GR+R I++ ++ ++ +A Q D L+AT P + + + +V +P PF Sbjct: 228 GRKRQISVFTRHYQVAMLLAEQHD--LIATLPSRAAWLQKDNPNLVVKVP-PF------- 277 Query: 286 LEVP---FTLLWHKRNSHNPKIVWLRETI 311 E+P + W HN WLR+ I Sbjct: 278 -EIPPFELKMAWSPLLQHNSDHQWLRKLI 305 >UniRef50_D0LQN8 Transcriptional regulator, LysR family n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LQN8_HALO1 Length = 302 Score = 82.4 bits (202), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 80/328 (24%), Positives = 149/328 (45%), Gaps = 44/328 (13%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 +++ +D+NLL+ L L+ RSVT+AA ++PSA+S+ L +LR F+D L V L Sbjct: 5 RNLHAVDMNLLVALDALLTTRSVTRAAGLAGLSPSAMSRVLGRLRDLFEDELLVRVGHEL 64 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTP--RGLKFELAAESPLMMIMLNALSKQIY 120 PT ++ L ++ + LL P G L E L ++L +L + Sbjct: 65 LPTARAQQVQPRLRVLLRDTEQLLSPPATSASEFEGRLTVLLTEH-LAKLVLPSLLVCVR 123 Query: 121 QRYPQATIKLRNWDYDSLDAITRGE----VDIGFSGRESHPRSRELLSSLPLAIDYEVLF 176 + P+ + +R+ A+ +G+ VD+ + E P ++ LF Sbjct: 124 EEAPRLALDVRHPGPYPESALQQGDAVLWVDVTY---EPDP-----------SLQAVALF 169 Query: 177 SDVPCVWLRKDHPALHQTWNLDTFLRYPHISIC---WEQSDTWALDNVLQELGRERTIAM 233 ++ +R +HP + LD ++ YPH+S+ W +SD +D +L+ GR R +A+ Sbjct: 170 AEPYLSVVRCEHPLVGTPVGLDDWVAYPHVSVSVRGWGRSD---VDIMLERAGRTRHVAL 226 Query: 234 SLPEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQL--PLVALPLPFDESQQKKLEVPFT 291 ++ F + D + A + ++ H + P + LP P + Sbjct: 227 TVHAFALVADVVVCGDYVSTMPARLAQRLVDERHTVLTPPIELP-------------PLS 273 Query: 292 L--LWHKRNSHNPKIVWLRETIKNLYAS 317 + WH+R+ +P+ W+R+ + L+A Sbjct: 274 IYACWHRRSDTDPRAAWIRQKVLELFAG 301 >UniRef50_A5VBV3 Transcriptional regulator, LysR family n=1 Tax=Sphingomonas wittichii RW1 RepID=A5VBV3_SPHWW Length = 319 Score = 82.0 bits (201), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 81/315 (25%), Positives = 140/315 (44%), Gaps = 25/315 (7%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 ++ DLNLL L +L+ ER+VT+AA+R+ VT A S +L +LR FDD L L Sbjct: 3 LSHFDLNLLRALDILLTERNVTRAAERLCVTQQAASSALQRLRHHFDDELLTRVGRHLEL 62 Query: 65 TPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFE--LAAESPLMMIMLNALSKQIYQR 122 TPL S+ + E + LD H P +++ +A + ++L L + + Sbjct: 63 TPLARSLIMPVREALLTVQAALDARPHFDPATARYKCRIAMSDYCLHVILPHLLRYLTIT 122 Query: 123 YPQATIKLRNWDYDSLDAITRGEVDIGFSGRE-----SHPRSRELLSSLPLAIDYEVLFS 177 P + S D + GE+D + + +H SR + ++PL D V + Sbjct: 123 APNMQCAVETLGPASFDRLEMGELDFCLTAHDMRLYGTHRPSRH-IRTMPLFRDDFVCVA 181 Query: 178 DVPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPE 237 D H + +L T+ R H ++ + + +++ E IA+ +P Sbjct: 182 D-------PAHVDIADGMSLRTYRRARHNTVDFGEDLKTIVEDAWASSSTEFDIAVLVPN 234 Query: 238 FEQSLFMAAQPDNLLLATAPRYCQYYNQLH-QLPLVALPLPFDESQQKKLEVPFTLLWHK 296 F +FM P L+AT+ R + N L +L L P Q +++ L WH+ Sbjct: 235 FAAQIFML--PGTPLVATSQR--RLANTLAPRLGLAVAECPMKLPQLQEI-----LFWHE 285 Query: 297 RNSHNPKIVWLRETI 311 R+ +P +++R+ Sbjct: 286 RSEQDPARIFVRKAF 300 >UniRef50_D1P3H6 Transcriptional regulator, LysR family n=1 Tax=Providencia rustigianii DSM 4541 RepID=D1P3H6_9ENTR Length = 303 Score = 82.0 bits (201), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 81/312 (25%), Positives = 136/312 (43%), Gaps = 33/312 (10%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 IT +DL L + L++ER+VT+AA ++ +T AVS L+KLR F D LF+ S GL Sbjct: 2 NGITRIDLKQLRVFKALLKERNVTRAAAQMGLTQQAVSAQLSKLRDTFQDHLFLRSAQGL 61 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGL--KFELAAESPLMMIMLNALSKQIY 120 PTPL +E + + S L P P + F ++A + ++L L ++ Sbjct: 62 IPTPLAEQLEPRVNTVFE-SIAALSPPDRFDPAEVYTTFVISATDYAVAVILPRLMAKVR 120 Query: 121 QRYPQATIKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 + P + +R+++ D L +T G++D+ + + +P + LFS+ Sbjct: 121 TQAPGLKLIIRDFESDRLYPLLTSGDLDLALT----------FPAFVPDGCQTKWLFSEH 170 Query: 180 PCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSD-TWALDNVLQELGRERTIAMSLPEF 238 R D P +Q + + P I + +++ + D+ G R I MS+P F Sbjct: 171 HICVTRSDSPMQNQQFTISDIADLPQIIVSPTRANLIGSADDWFASKGYSRNIVMSVPSF 230 Query: 239 EQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVP-FTLL--WH 295 A AP + + LP LP P Q P F ++ WH Sbjct: 231 ---------------AAAPACIASTDCIAFLPSRILPNPLVRPIQLDDSPPSFDVIAAWH 275 Query: 296 KRNSHNPKIVWL 307 R++ +P W+ Sbjct: 276 LRSNQDPLHKWI 287 >UniRef50_Q2G901 Transcriptional regulator, LysR family n=2 Tax=Alphaproteobacteria RepID=Q2G901_NOVAD Length = 302 Score = 82.0 bits (201), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 72/325 (22%), Positives = 142/325 (43%), Gaps = 41/325 (12%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 LDLNLL+ LM+ RSVT+AA+RI +T A S +L +LR +F D + V + PTP Sbjct: 6 LDLNLLVVFDALMETRSVTRAAERIGLTQPATSAALRRLRDYFRDEIVVAVGKRMHPTPF 65 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTP--RGLKFELAAESPLMMIMLNALSKQIYQRYPQ 125 ++ + + ++ + P P +F + +M+ +L L ++ + P Sbjct: 66 AEALHPQIQQALRRVERAISMPTEFDPSTSTRRFRIIGSDYIMVAVLVPLIERFARTAPG 125 Query: 126 ATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDY---EVLFSDVPCV 182 I++ + S+ + G D+ L++ P + EVLF + V Sbjct: 126 VRIEIIQPNEHSVAELEAGRADL-------------LVTPEPFLASWHPSEVLFDEEQVV 172 Query: 183 WLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWAL-DNVLQELGRERTIAMSLPEF--- 238 +P + D F H+++ + + T A D+ L +GRER + +++ F Sbjct: 173 VGWAQNPIFARGVTADDFYAAGHVTVAFGANRTPAFADSALSRMGRERRVEVTVGSFASA 232 Query: 239 ----EQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLW 294 E + +A + L+ A R+ + + +PFD +++ + + Sbjct: 233 PWFIEGTSRLAVLHERLVRQIARRFNLAWAR----------MPFDFPTMQEM-----MQF 277 Query: 295 HKRNSHNPKIVWLRETIKNLYASMA 319 H+ + + + WLR+ ++ + + A Sbjct: 278 HEARAEDAGLAWLRQQMREVASENA 302 >UniRef50_Q2KYC5 LysR-family transcriptional regulator n=9 Tax=Burkholderiales RepID=Q2KYC5_BORA1 Length = 306 Score = 82.0 bits (201), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 85/334 (25%), Positives = 135/334 (40%), Gaps = 54/334 (16%) Query: 4 SITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLS 63 ++ LDLNLL+ Q L++ER+++ A+R++++ AVS +L +LR F D LFV + G+ Sbjct: 9 ALRKLDLNLLVVFQHLLEERNISAVARRLDLSQPAVSNALRRLRLAFGDELFVRTAQGML 68 Query: 64 PTPLMVSMEQNLAEWMQMSNLLLDKPHHQTP----RGLKFEL--AAESPLMMIMLNALSK 117 PTPL M ++E + + + L D P R L+ + A E M ++ ++ Sbjct: 69 PTPLAEGMGGQVSEALSLLSHLADAAQPFDPATSQRRLRIAMSDAGEIHFMPTLMELCAR 128 Query: 118 QIYQRYPQATI-KLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVL 175 + P I LR D LD G VD+ L I +L Sbjct: 129 HV----PGVRIDSLRCTDLQRELDT---GRVDLALGA----------FDGLGSGIVQRML 171 Query: 176 FSDVPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSL 235 F R HP + + F H+ + D ++ L+ G S+ Sbjct: 172 FRQGYATLFRAGHPRAYAGMSARAFRAEQHLVVSRAAPDGQ-INQALERAGVVLQEQFSV 230 Query: 236 PEF-------EQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEV 288 P F + +A P+ L + APR+ L L LP ++V Sbjct: 231 PHFAAVPYIVSTTDLLATVPEKLAASAAPRFG----------LQVLTLP--------IKV 272 Query: 289 PF---TLLWHKRNSHNPKIVWLRETIKNLYASMA 319 P L WH+R + WLR I + +A A Sbjct: 273 PLLQTNLYWHRRFQRDGANQWLRGLIIDTFADRA 306 >UniRef50_Q5LKP3 Transcriptional regulator, LysR family n=1 Tax=Ruegeria pomeroyi RepID=Q5LKP3_SILPO Length = 324 Score = 82.0 bits (201), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 78/311 (25%), Positives = 136/311 (43%), Gaps = 22/311 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 LDLNLL+ + + +++ AAKR+NV+ +S +LA+LR DPLF+ S G++PTP Sbjct: 6 LDLNLLVTFEAIYTAGNISHAAKRLNVSQPTISNALARLRDTVGDPLFIRSGRGVAPTPR 65 Query: 68 MVSMEQNLAEWMQM--SNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQ 125 M + + +QM S D+ + F + L I++ L + + Q Y Sbjct: 66 ATGMIGPVRDALQMIQSGFGDDERFDPSTTRRNFRIVVLDMLEPILMPPLVRAV-QDYRS 124 Query: 126 ATIK-LRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 T++ L D+ + + G +D+ + + P+ + I+ E + + + Sbjct: 125 VTLEMLPVMDFPIAEGLNDGSLDLALTTFD--PQHGD--------IECEQVGAAKIVIVA 174 Query: 185 RKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 RK HP + H+++ + +D VL+ +R I + F + Sbjct: 175 RKGHPRIKGEMTPALVSEIGHVALIPKIRALSRVDEVLRYAKIDRHIVYMVTRFWSFPHI 234 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 A D L+A P + L PL P+PF+ +Q ++W KR+ +P Sbjct: 235 LANSD--LIAMMPGDFAAHAALF-YPLDIFPVPFEFPEQH-----IYMIWKKRHGLDPGH 286 Query: 305 VWLRETIKNLY 315 WLRE I Y Sbjct: 287 TWLREKIVEAY 297 >UniRef50_A1W256 Transcriptional regulator, LysR family n=2 Tax=Comamonadaceae RepID=A1W256_ACISJ Length = 323 Score = 82.0 bits (201), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 83/313 (26%), Positives = 133/313 (42%), Gaps = 20/313 (6%) Query: 7 TLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTP 66 TLDLNLL +M ER++T+AA+++ +T AVS +L +LR D L G+ PTP Sbjct: 8 TLDLNLLRVFDEVMAERNLTRAAEKLAITQPAVSNALRRLREVLGDELVTRRGHGVEPTP 67 Query: 67 LMVSM----EQNLAEWMQ-MSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQ 121 +++ LA+ + +S D QT F LA ++ L + + + Sbjct: 68 RALALWPAVRHALAQLQETLSPGRFDPASAQT----TFVLAMADATGATLIPPLIEIVER 123 Query: 122 RYPQATIK---LRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSD 178 P +++ L D L ++ +G+ + S +A + L+ Sbjct: 124 EAPGVSLRVVPLTTRDPRRLLDEESADMAVGYFPAVLADLTARAQSDNVVAHESTRLYDS 183 Query: 179 VPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEF 238 +R DHP LD + H+ + + +D L LGRER I +++ +F Sbjct: 184 QYVCVMRADHPLAAVPMTLDLYCAARHLLVSFSGKPFGFIDGALAALGRERRIVLTVNQF 243 Query: 239 EQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRN 298 + + A D LL PR+ + LV PLP V LWH+R Sbjct: 244 FTAGRVVATTD--LLTVLPRHFVGVASVRD-ELVWRPLPMTLP-----PVHVDALWHRRR 295 Query: 299 SHNPKIVWLRETI 311 +H+P WLRE I Sbjct: 296 NHDPAHRWLREAI 308 >UniRef50_D1SW87 Transcriptional regulator, LysR family n=1 Tax=Acidovorax avenae subsp. avenae ATCC 19860 RepID=D1SW87_9BURK Length = 330 Score = 81.6 bits (200), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 86/336 (25%), Positives = 135/336 (40%), Gaps = 59/336 (17%) Query: 4 SITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLS 63 +I ++DLNL L Q + RSVT A +R+ +T SAVS +L ++R F+D LFV S G+ Sbjct: 2 NIHSIDLNLFLVFQAIFATRSVTLAGERLGMTQSAVSNALKRMRERFNDVLFVRSAEGMV 61 Query: 64 PTP----LMVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQI 119 PTP L+ +E+ LA + Q + +G FE L I +N + + + Sbjct: 62 PTPLAERLIGPVEEGLAAFSQAVD-----------QGRTFEAGTSGRLFRIAVNDIGQLV 110 Query: 120 Y-------QRYPQATIKLRNWDYDSLDAITR---GEVDIGFSGRESHPRSRELLSSLPLA 169 R I+ D +A R G++D+ E P+ Sbjct: 111 MMPRLLSLARGLAPGIRFETVDVPRAEARQRMLHGQIDVALGSWE------------PMG 158 Query: 170 IDY--EVLFSDVPCVWLRKDHP-ALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELG 226 + + LF + V + + P + LD +L HI+ + L L+ +G Sbjct: 159 PSFYQQRLFDETFVVLVARASPLGTRDSIALDDYLAAEHIAYRPRGTTDHQLQQALERVG 218 Query: 227 ---RERTIAMSLPEFEQSLFMAAQPDNLLLATAPRYCQYY----NQLHQLPLVALPLPFD 279 R R + + S +A L+L R Q + LH L PF+ Sbjct: 219 ALDRRRVVLTAAHSLGLSSIVATT--GLVLTAPQRLAQAMVASRSDLHILNAPFEVAPFE 276 Query: 280 ESQQKKLEVPFTLLWHKRNSHNPKIVWLRETIKNLY 315 SQQ WH+R + WLRE + L+ Sbjct: 277 ISQQ----------WHERFHQDSGNRWLRELMFGLF 302 >UniRef50_B7VJR0 Transcriptional regulator n=7 Tax=Vibrionaceae RepID=B7VJR0_VIBSL Length = 309 Score = 81.6 bits (200), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 88/324 (27%), Positives = 146/324 (45%), Gaps = 35/324 (10%) Query: 2 KKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLG 61 K ++LDLNLL ++ QE++ KAA+R+ V+ AVS++L KLR F+D LFV G Sbjct: 3 KDLFSSLDLNLLRTFLIVYQEKNTRKAAERLFVSQPAVSQALQKLRHHFNDDLFVKVHGG 62 Query: 62 LSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELA-AESPLMMIMLNA-LSKQI 119 L PT + + +M ++ ++ + P+ + + L A SP+++ L+ L K I Sbjct: 63 LQPTAFSEQLTNQIKPFMDGLSIAVNTSNTFDPKEIDYTLKIALSPVVLSCLSGSLFKDI 122 Query: 120 YQRYPQATIKLRNWDYDSLDAITRGEVDIGFS--GRESHPRSRELLSSLPLAIDYEVLFS 177 + P A +KL W S+ I + EV +G S G ++ S+E+ + L Sbjct: 123 KAQAPNAKLKLVPWSNSSVSDIQKDEVLMGVSYLGEKT---SKEVYT--------RQLIE 171 Query: 178 DVPCVWLRKDHPALHQTWNLDTFLRYPHISIC---WEQSDTWAL-DNVLQELGRERTIAM 233 +++RKDHP T + Y S+ W +D ++L +L +L E I Sbjct: 172 LTGRIFVRKDHPLKQDTVTPNDMAGYEIASLVTPGW--NDNFSLASQILTDLSIEHRIG- 228 Query: 234 SLPEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPL--PFDES-QQKKLEVPF 290 F L MA ++ Y + P+ P D S K L+ P Sbjct: 229 ----FRSELVMA------IIDVIQHTDMYMPHSNLFPVENYPTLRGIDVSVDGKTLKTPV 278 Query: 291 TLLWHKRNSHNPKIVWLRETIKNL 314 H +N ++P WL + I+ + Sbjct: 279 YSYIHIKNRNSPLTNWLSKLIEQV 302 >UniRef50_Q15TE0 Transcriptional regulator, LysR family n=4 Tax=Alteromonadales RepID=Q15TE0_PSEA6 Length = 307 Score = 81.6 bits (200), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 77/311 (24%), Positives = 139/311 (44%), Gaps = 26/311 (8%) Query: 6 TTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPT 65 + +DLNL L L + QE S+T A KR++++ AVS +L++LR + DPLFV + T Sbjct: 6 SKIDLNLFLILVAVYQEGSITGAGKRLHLSQPAVSHALSRLRDKYQDPLFVRHGRKMIAT 65 Query: 66 PL----MVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQ 121 L M + ++AE + + D HQ R +KF L I L+ + Sbjct: 66 QLCQTIMPRVLSSVAELESTLHDIGDFDVHQYQREMKFGF--RDILESIFFPELATDLMA 123 Query: 122 RYPQATIKLRNWDYDSLDAITRGE-VDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 P T+ R ++A + +DI ++L+ I + ++ + Sbjct: 124 NTPNITVHSRQVSRLDMEAALESQALDIVI----------DVLTPTSNDIHHTLICDEHF 173 Query: 181 CVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQ 240 + RK HP L +L +++ H + ++ S +D L + R A+ + Sbjct: 174 SLICRKGHPIL-SDMSLANYIKAEHALVTFKDSAVNTVDMALAKHAVARKFALKCEHYFA 232 Query: 241 SLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 + + ++ D +LL Y + Q Q+P+ +PLPF+ +P + WHK+ H Sbjct: 233 ATSVISRCD-MLLTMPNAYARLLKQ--QMPVEVVPLPFEVPI-----LPVHMYWHKQAEH 284 Query: 301 NPKIVWLRETI 311 +P W+R+ + Sbjct: 285 DPLNSWMRQKL 295 >UniRef50_C8WFJ3 Transcriptional regulator, LysR family n=3 Tax=Zymomonas mobilis RepID=C8WFJ3_ZYMMN Length = 316 Score = 81.6 bits (200), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 66/237 (27%), Positives = 112/237 (47%), Gaps = 14/237 (5%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 IT D NL++ L ERSVTKAA R++++ SAVS SL++LR D LF+ + G+ P Sbjct: 10 ITRFDFNLVITFLALWHERSVTKAAARLSLSQSAVSASLSRLRQAAGDLLFIRTRQGMEP 69 Query: 65 TPLMVSMEQNLAEWMQM-SNLLLDKPHHQTPRGLK-FELAAESPLMMIMLNALSKQIYQR 122 T + M ++L+E + N + + R + F + + + + +SKQI Sbjct: 70 TQRAIDMVESLSEGATLIYNAFISENEFDPARCNRHFSIGMSDDFQLALGSEISKQIQAI 129 Query: 123 YPQATIKLRNWD-YDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPC 181 P+A++ R + Y + + ++D+ S PR R L + Y L C Sbjct: 130 APEASVVYRQTNRYTAQQMLENNDIDLAIV-TASLPR-RGLWQQVIGEGGYACLCDAQSC 187 Query: 182 VWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEF 238 + ++P L+ +L PHI + + + +D +L +GR R I +L F Sbjct: 188 GF--SENP------TLEAYLSLPHILVSYSGREGL-VDEILSIMGRSRKIQTALTHF 235 >UniRef50_A4SH82 Transcriptional regulator, LysR family n=2 Tax=Aeromonas RepID=A4SH82_AERS4 Length = 324 Score = 81.6 bits (200), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 84/325 (25%), Positives = 145/325 (44%), Gaps = 37/325 (11%) Query: 1 MKKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPL 60 M+ ++ LDLNLL +LMQER+VT+AA+R++++ S VS +L +LR DDPLFV S Sbjct: 1 MELPLSRLDLNLLTVFDMLMQERNVTRAAERLHLSQSTVSHALGRLRQALDDPLFVMSRR 60 Query: 61 GLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGLK--FELAAESPLMMIMLNALSKQ 118 + PT ++ + + + M L + P + F +A + ++ AL +Q Sbjct: 61 EMMPTERAKTLAGPVRQALAMLEQGLRQAEGFDPASARRIFRIATPGSVEHGLVPALVEQ 120 Query: 119 IYQRYPQATIKLRNW-DYDSLDAITRGEVD--IGFS-GRESHPRSRELLSSLPLAIDYEV 174 ++++ P +++ D D + +GE+D IGF+ PR + E Sbjct: 121 LHRQAPHCRLEVCELADSDYERELEKGELDLVIGFADANHFSPR-----------LWREP 169 Query: 175 LFSDVPCVWLRKDHPALHQTWNLDTFLRYPHI-SICWEQSDTWALDNVLQELGRERTIAM 233 F++ P V L L + + PHI + W S +D L G ER + + Sbjct: 170 WFNN-PLVCLSPLGSELPEVLGPAELVSRPHIHTSSWGHSQAM-VDLWLARFGVERELGV 227 Query: 234 SLPEFEQSLFMAAQPDNLLLA---TAPRYCQYYN-QLHQLPLVALPLPFDESQQKKLEVP 289 LP F + A L++ +C+YY +LHQL ++ + Sbjct: 228 RLPSFMAVPPLMATGRYLVVVPEMIGRHFCRYYPLRLHQL-------------NPEIPIV 274 Query: 290 FTLLWHKRNSHNPKIVWLRETIKNL 314 + + H +H+ I W + + L Sbjct: 275 YLMAGHPLTAHDQAIGWFKGLLHRL 299 >UniRef50_Q38ZY8 Transcriptional regulator, LysR family n=1 Tax=Burkholderia sp. 383 RepID=Q38ZY8_BURS3 Length = 310 Score = 81.6 bits (200), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 80/315 (25%), Positives = 135/315 (42%), Gaps = 25/315 (7%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 + + D+NLL+ LMQERSVT+AA ++ + A+S SL+ LR D LF+ L P Sbjct: 9 LRSFDMNLLIAFDALMQERSVTRAAAKLRIQQPAMSHSLSTLRLLLRDELFIRVGRTLQP 68 Query: 65 TPLMVSMEQNL-AEWMQMSNLLLDKPHHQTPRGLK-FELAAESPLMMIMLNALSKQIYQR 122 TP +S++ + + +Q+ L + + F +A + + ++L + + Sbjct: 69 TPRALSLQHTVRSSLLQLQEALKTEESFDPSNARRDFRVAMTNGIESLLLPDMVARFRTD 128 Query: 123 YPQATIKLRNWD-YDSLDAITRGEVDIGFSGRES-HPRSRELLSSLPLAIDYEVLFSDVP 180 T+ R+ D D D + RGE+++ ES HP R LF++ Sbjct: 129 AQGMTLLARSVDPQDMPDMLDRGELNLAIGCYESTHPWIRR-----------HELFNETL 177 Query: 181 CVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQ 240 D + + T++ PH+ + + L++ L++ E I + P F Sbjct: 178 TCCFNPDLLPIKTPIDEQTYVETPHVVVSMRNTILGCLEDALRDARVELNIVSAGPNFLA 237 Query: 241 SLFMAAQPDNLLLATAP-RYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 L MAA D +L T P R Y L +P+ F + P ++WH R Sbjct: 238 VLMMAA--DTPVLTTLPSRIALRYADRFGLSTCPVPISFSAN-------PIAMVWHARED 288 Query: 300 HNPKIVWLRETIKNL 314 P WLR ++ L Sbjct: 289 REPGSEWLRRLVREL 303 >UniRef50_Q2BJ61 Transcriptional regulator, LysR family protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BJ61_9GAMM Length = 302 Score = 81.3 bits (199), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 77/326 (23%), Positives = 140/326 (42%), Gaps = 39/326 (11%) Query: 4 SITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLS 63 ++ ++DLNLL+ LQ L+ E+ V+KAA+R+N++ AVS++L +LR DP+ V + G Sbjct: 2 NLRSVDLNLLVVLQALIDEQHVSKAAERLNMSQPAVSRALQRLRTTLQDPILVRTGSGYD 61 Query: 64 PTPLMVSMEQNLAEWMQMSNLLLDKPHHQTP---------RGLKFELAAESPLMMIMLNA 114 + V + + L+ + ++ +P P GL EL P ++ ML Sbjct: 62 LSARAVVLREQLSHVLHEVQAIM-QPEQFDPMQAEGVLKLTGLDLELILLMPDVIRMLR- 119 Query: 115 LSKQIYQRYPQATIKLRNWDYDSLDAITRGEVDIGFSG---RESHPRSRELLSSLPLAID 171 ++ P +++ + + + RG+V +G + H + R + Sbjct: 120 ------EKAPNLRVEVVPQLPEHFELLERGDVHFTITGLFPQTHHDQYRRI--------- 164 Query: 172 YEVLFSDVPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTI 231 E+ + CV + +D+P +L + H + +D+ L E G +R + Sbjct: 165 -EIARTGHVCV-MDRDNPLAKGELSLQDYANASHGLVSITGKGPGMMDDALGEFGYKRKV 222 Query: 232 AMSLPEFEQSLFMAAQPDNLLLATAPRY-CQYYNQLHQLPLVALPLPFDESQQKKLEVPF 290 + L F Q D L+ T P+ + Q L L LP F EV Sbjct: 223 MLRLANFMSVAQFCQQSD--LIFTLPKIMATHLAQGTSLVLRPLPKEFALP-----EVVL 275 Query: 291 TLLWHKRNSHNPKIVWLRETIKNLYA 316 + WH R H+P W+R + +++ Sbjct: 276 YMYWHDRYHHDPMCSWVRAELAEIFS 301 >UniRef50_Q3KA14 LysR family regulatory protein n=24 Tax=Bacteria RepID=Q3KA14_PSEPF Length = 314 Score = 81.3 bits (199), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 79/326 (24%), Positives = 145/326 (44%), Gaps = 47/326 (14%) Query: 4 SITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLS 63 +++ +DLNL + + E ++T+A + + +T AVS +LA+LR F+DPLFV + G+ Sbjct: 2 NLSKVDLNLFIVFDAIYTEANLTRAGQIVGITQPAVSNALARLRETFNDPLFVRTAQGMV 61 Query: 64 PTPLMVSMEQNLAEWMQMSNLLLDKPHHQT-----PRGLK-FELAAESPLMMIMLNALSK 117 PTP M QN+ ++ + LL ++ + +K + ++ ++L L + Sbjct: 62 PTP----MAQNIIGPVRNALSLLRVSVQESRIFNPSQAVKTYRISMTDLTEAVILPPLFQ 117 Query: 118 QIYQRYPQATIK-LRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEV-- 174 ++ + P I+ + ++ + G +D PL D +V Sbjct: 118 RLRRLAPTVIIESFLSKRRETTKELAAGRLDFAVDA--------------PLNTDPQVRH 163 Query: 175 --LFSDVPCVWLRKDHP-ALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTI 231 L D +RK HP A + + LD +L HI I +S +D L ++G +R I Sbjct: 164 VKLMEDRYVCAMRKGHPLATKEKFTLDDYLSLTHIHISSRRSGLGHVDLALGKMGIQRKI 223 Query: 232 AMSLPEFEQSLFMAA---QPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEV 288 A+ Q MA+ Q ++++ R+ + ++ LH L +P E+ Sbjct: 224 ALR----SQHYLMASQVLQQTDMVMTVPERFARRHD-LHAFNLPVNDVPPVETH------ 272 Query: 289 PFTLLWHKRNSHNPKIVWLRETIKNL 314 L WH+ +P W+RE + L Sbjct: 273 ---LYWHESTDQDPANRWMREQMIEL 295 >UniRef50_Q0SCY7 Transcriptional regulator, LysR family protein n=3 Tax=Actinomycetales RepID=Q0SCY7_RHOSR Length = 331 Score = 81.3 bits (199), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 81/315 (25%), Positives = 138/315 (43%), Gaps = 24/315 (7%) Query: 4 SITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLS 63 + +DLNL+ LL + RSVT+ A+ + +T +VS SL +LR F+D LF+ S GL+ Sbjct: 27 GMADVDLNLIRTFVLLYETRSVTRTAELLFITQPSVSHSLRRLRRQFNDDLFIRSSDGLA 86 Query: 64 PTPLMVSMEQNLAEWMQMSNLLLDKPHH--QTPRGLKFELAAESPLMMIMLNALSKQIYQ 121 PT L SM L + +++ + + H F + A + +L + + Sbjct: 87 PTVLAASMYPQLHQALEVIDETVSGVGHFDAETSDRTFRICATDLGEISLLPGVLAALET 146 Query: 122 RYPQATIKLRNWDYDS-LDAITRGEVD-IGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 R P +++ D+ S + + +G D + + R P R + LF + Sbjct: 147 RAPGCAVQVTPLDFASAAEELRQGRADAVICTPRIDAPDLRR-----------DPLFREG 195 Query: 180 PCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFE 239 HP + LD FL HI + A D L +GR R IA+ +P F Sbjct: 196 YVGLCALGHPRIGVEPGLDDFLAERHIVVDAAAGHVDA-DQALARMGRRRDIAVRVPHFA 254 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 + AQ +L + + R + + + + ALP+ + +EV +L +R Sbjct: 255 VLPELVAQTRHLAVVPS-RVAELFTRSSPVRTFALPV-----EIPNVEV--SLFTVRRAL 306 Query: 300 HNPKIVWLRETIKNL 314 +P + WLRE I ++ Sbjct: 307 PSPGVDWLRELIADV 321 >UniRef50_Q0VLU8 Transcriptional regulator, LysR family n=2 Tax=Alcanivorax RepID=Q0VLU8_ALCBS Length = 310 Score = 80.9 bits (198), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 88/313 (28%), Positives = 133/313 (42%), Gaps = 29/313 (9%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 ++ DLNL + + E S+T+AAK +N+T AVS +LA+LRA +DPLFV + P Sbjct: 3 VSRFDLNLFVVFDAIYTEGSLTRAAKVLNLTQPAVSHALARLRARLNDPLFVRQGSRMVP 62 Query: 65 TP---LMVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQ 121 T MVS ++ Q L + + F L L +L AL Q Sbjct: 63 TARARAMVSPVRHALGGFQRC-LSEEGGFDASEAERTFVLGLRDGLEARLLPALMSQFMD 121 Query: 122 RYPQATIKLRNWDYDSLDAITR---GEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSD 178 P IKL++ T G +D+ +++ +LP AI+++V+ Sbjct: 122 EAP--GIKLQSLTVSRRQMATELASGRLDLAC----------DVMLALPEAIEHQVVLEG 169 Query: 179 VPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEF 238 V +R+ HP L Q +L +L H+ + + D L G R I + + Sbjct: 170 PLVVLMRESHP-LAQGMDLPDYLAAQHVLVSSRREGPGLEDFGLARQGYRRHIRLRCQHY 228 Query: 239 EQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRN 298 + +L Q D LL T P QL LV P P LE+ L WH+ Sbjct: 229 QAALSTVQQTD--LLLTMP--ASLAGQLSDQGLVWKPFP---GGLPGLEM--HLYWHRDQ 279 Query: 299 SHNPKIVWLRETI 311 S +P WLR+ + Sbjct: 280 SADPAHSWLRQRV 292 >UniRef50_C6DDI5 Transcriptional regulator, LysR family n=4 Tax=Enterobacteriaceae RepID=C6DDI5_PECCP Length = 310 Score = 80.5 bits (197), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 88/336 (26%), Positives = 142/336 (42%), Gaps = 55/336 (16%) Query: 1 MKKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPL 60 M+ +DLNLL+ +L +ERSV+ AA ++++ AVS +LA+LR FDDPLF+ + Sbjct: 1 MENDFRGVDLNLLVTFLVLYRERSVSVAADKLHLGQPAVSGALARLRTLFDDPLFIRTGQ 60 Query: 61 GLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTP----RGLKFELA--AESPLMMIMLNA 114 + PT + L+ + +L +P P R + + E LM ++L Sbjct: 61 VMRPTARADYLATQLSPAFEQLQSVLGEPESFDPLTDSRAITLGMTDWVEIWLMPLLL-- 118 Query: 115 LSKQIYQRYPQATIKLRNWD-YDSLDAITRGEVDIGFSGRESHP---RSRELLSSLPLAI 170 K++ P I L D + ++ + VD+ S + R LLS Sbjct: 119 --KRLKANAPHLRINLVATDPFLDVERLENDSVDLVISVASPQAGWLKQRALLS------ 170 Query: 171 DYEVLFSDVPCVWLRKDHP---ALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGR 227 S +W HP AL L+ + + H+ + + + +D++L++ G Sbjct: 171 ------SGFRALW----HPQQLALPSPVPLEVYSQQRHLLVTYRERAHGIVDDMLEKQGM 220 Query: 228 ERTIAMSLPEF-------EQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDE 280 RTI + P F + + +A P+ L A +CQ+Y L P+P D Sbjct: 221 TRTIYYTTPHFSALPGILQHTPSVATVPEKL----ATLWCQHYG------LNDSPVPLDL 270 Query: 281 SQQKKLEVPFTLLWHKRNSHNPKIVWLRETIKNLYA 316 + LWH R NP I WL E I A Sbjct: 271 PTYT-----LSALWHARQDSNPAIAWLYEQIAEAIA 301 >UniRef50_B9QVA6 LysR substrate binding domain protein n=1 Tax=Labrenzia alexandrii DFL-11 RepID=B9QVA6_9RHOB Length = 299 Score = 80.5 bits (197), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 81/306 (26%), Positives = 131/306 (42%), Gaps = 39/306 (12%) Query: 24 SVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSMEQNLAEWMQMSN 83 +V+ AAK+I +T A+S L +LR F+DPL V S L T +++ +L +Q N Sbjct: 22 NVSLAAKQIGITQPAMSAQLKRLRDLFNDPLLVPSGRRLVATTRARALQNDLRAHLQGLN 81 Query: 84 LLL------DKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQATIKLRNWD--- 134 L+ D +T F L + ++ + K + P A +D Sbjct: 82 ALVRDHTVFDPASSET----TFRLIGTDYVHAVLAAPVQKMLAAEAPGARAAFLAFDPKI 137 Query: 135 -YDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPALHQ 193 + SL+A T D+ + S P ++ + L D++V+ S K HP + Q Sbjct: 138 LWSSLEAET---ADLALATGMSLPEAKRQSA---LTEDFQVIMS--------KTHPLVGQ 183 Query: 194 TWNLDTFLRYPHISICWEQSD-TWALDNVLQELGRERTIAMSLPEFEQSLFMAAQPDNLL 252 L+ F +PHI + E A D VL+E G +R +A+SLP F + + + D L Sbjct: 184 PMTLEGFCAFPHILVSPEGGGFIGATDRVLKETGHKRRVAISLPSFLLAPALVSSSDALC 243 Query: 253 LATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWLRETIK 312 + + +LHQ + P PF LLWH R ++P W R ++ Sbjct: 244 MMPS-----RLAKLHQGNMACTPSPFPSP-----AFDVDLLWHPRRQNDPAHKWFRAQVR 293 Query: 313 NLYASM 318 L + Sbjct: 294 RLAQGL 299 >UniRef50_P30979 Uncharacterized HTH-type transcriptional regulator ybeF n=45 Tax=Enterobacteriaceae RepID=YBEF_ECOLI Length = 317 Score = 80.5 bits (197), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 74/315 (23%), Positives = 149/315 (47%), Gaps = 25/315 (7%) Query: 4 SITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLS 63 ++ +DLNLL + + + + AAK +N+TPSA+S+S+ KLR F DPLF+ G++ Sbjct: 25 TLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVT 84 Query: 64 PTPLMVSMEQNLAEWMQMSNLLLD-KPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQR 122 PT + + + +++ ++ LD + + R + +A + ++L + + I Sbjct: 85 PTAFAMHLHEYISQGLESILGALDIEGSYDKQRTIT--IATTPSVGALVLPVIYRAIKTH 142 Query: 123 YPQATIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPC 181 YPQ + LRN D+ + +++ + D+ R+ + + VLF+D Sbjct: 143 YPQ--LLLRNPPISDAENQLSQFQTDLIIDNMFCTNRT----------VQHHVLFTDNMV 190 Query: 182 VWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQS 241 + R+ +P L + +T H+ + E+ + L +QE+ +R I + Sbjct: 191 LICREGNPLLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTI 250 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQL-PLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 + A D +LA P ++YN + PL LP P +Q + F++ ++K + Sbjct: 251 AALVANSD--MLAIIP--SRFYNLFSRCWPLEKLPFPSLNEEQ----IDFSIHYNKFSLR 302 Query: 301 NPKIVWLRETIKNLY 315 +P + + + I+N + Sbjct: 303 DPILHGVIDVIRNAF 317 >UniRef50_A9AQZ4 Transcriptional regulator, LysR family n=24 Tax=Burkholderiaceae RepID=A9AQZ4_BURM1 Length = 327 Score = 80.5 bits (197), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 81/332 (24%), Positives = 134/332 (40%), Gaps = 52/332 (15%) Query: 4 SITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLS 63 ++ LDLNL+ L L R+V++A + + V+ VS +L +LRA+F DPLFV + G+ Sbjct: 19 AMDALDLNLIPYLVALDDTRNVSRAGELLGVSQPRVSTALGRLRAYFGDPLFVRTSRGME 78 Query: 64 PTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGL--KFELAAESPLMMIMLNALSKQIYQ 121 PTP +++ + + L PH P F +A ++ L L + Q Sbjct: 79 PTPRALALLPAARDALAQIERGLVAPHDFDPAASTHTFSIALSDVGEIVFLPKLLQAFAQ 138 Query: 122 RYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDY--------- 172 P A ++ + +D EV G S+ LA+ Y Sbjct: 139 CAPHANLRSVSLPHD--------EVGRGLEA-----------GSIDLAVGYFPDLDGNNF 179 Query: 173 --EVLFSDVPCVWLRKDHPALHQT--WNLDTFLRYPHISICWEQSDTWALDNVLQELGRE 228 + LF+ +R+ HP L Q + ++ FL H + E L+ L + + Sbjct: 180 FQQRLFTHRFVCLMRRGHP-LEQARPFTVEQFLESGHAVVRAEGRSQEVLEKYLAKQRMQ 238 Query: 229 RTIAMSLPEFEQSLFMAAQPDNLLLATAPRYCQY-YNQLHQL----PLVALPLPFDESQQ 283 R + P F F+ ++ D L+AT P Y Y H FD Q Sbjct: 239 RRAVLETPHFMSLPFILSRTD--LIATVPHAIGYAYAAEHAFIVPVEPPLPLPRFDLKQH 296 Query: 284 KKLEVPFTLLWHKRNSHNPKIVWLRETIKNLY 315 WH++ ++P+ WLR + +L+ Sbjct: 297 ----------WHRKFHNDPRTAWLRGVVASLF 318 >UniRef50_Q88LJ0 Transcriptional regulator, LysR family n=1 Tax=Pseudomonas putida KT2440 RepID=Q88LJ0_PSEPK Length = 320 Score = 80.1 bits (196), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 63/300 (21%), Positives = 143/300 (47%), Gaps = 33/300 (11%) Query: 21 QERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSMEQNLAEWMQ 80 +E++++ AA+R+ ++ S SL +LR +F+D LF+++ G+ PTP VS+ +++ ++ Sbjct: 19 REQNLSAAARRLGMSQPMASASLRRLREYFEDQLFLSTGRGMRPTPFTVSIAASVSGVLE 78 Query: 81 -MSNLLLDKPHHQTPRGLK-FELAAESPLMMIMLNALSKQIYQRYPQATIKLRNWDYDSL 138 + + +L KP Q + + F ++ +I + + +++ + P ++ + + L Sbjct: 79 RIKHEILAKPAFQPRQSDRLFTISTSDIGALIFVPPILRRLGEDAPNTDLRCVSLPHQQL 138 Query: 139 D-AITRGEVD--IGF----SGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPAL 191 + A+ +G VD +G+ G + + + LF +R++HP++ Sbjct: 139 EQALEQGSVDLAVGYFPDLQGEQ---------------VKTQALFEHNFTCIVRRNHPSI 183 Query: 192 HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQPDNL 251 T +L+ FL H+ + E + L+EL +R + + +P F + A + Sbjct: 184 GDTLSLEQFLAADHLVVNQEGRSQEIFEQRLRELKLQRRVHLEVPHFMSVPQLIASTN-- 241 Query: 252 LLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWLRETI 311 ++AT P + Q+ ++ P+ ++ + K L WH++ +P + W R + Sbjct: 242 MVATVPLSLGVWFASEQIKMLTPPIEVEKFELK-------LHWHRQMEDDPAVSWFRNAV 294 >UniRef50_Q1M9F6 Putative LysR-family transcriptional regulator n=1 Tax=Rhizobium leguminosarum bv. viciae 3841 RepID=Q1M9F6_RHIL3 Length = 317 Score = 80.1 bits (196), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 80/322 (24%), Positives = 143/322 (44%), Gaps = 37/322 (11%) Query: 4 SITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLS 63 S+ +DLNLL +LM+ERSVT+AA R+ T SA+S SL +LR F D LF + Sbjct: 5 SLNQIDLNLLRTFDVLMRERSVTRAADRLGRTQSAISHSLGRLRDVFKDDLFTREAGIME 64 Query: 64 PTPLMVSMEQNLAEWMQMSNLLLDKPHHQTP--RGLKFELAAESPLMMIMLNALSKQIYQ 121 PT + + +++ + + +D+ + P F + + L L + Sbjct: 65 PTARAKELAEVISQALHEIRVAVDRHLNFDPTTTSRNFRIGLSDYTAVTYLPELIENFSM 124 Query: 122 RYPQATIKLRNW-DYDSLDAITRGEVDIGFSGRESHPR-SRELLSSLPLAIDYEVLFSDV 179 P A++ + + + D+L ++ EV+ G +P+ E + L+ D V Sbjct: 125 LAPNASLNVVHAREPDALGSLKNREVECAVLG---NPKLDAEHFEVVELSRDRMVCAG-- 179 Query: 180 PCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEF- 238 W +PA+ +LD +L PH+ I + D LQ+LG R + ++P + Sbjct: 180 ---W--TGNPAM-ADMSLDRYLASPHLQISADGIAAGVADITLQKLGLHRKVVATIPHYL 233 Query: 239 ------EQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTL 292 + + ++A D +LLA ++ + +V PL +V +L Sbjct: 234 VAPWVIKGTELISAFGDGVLLA--------LSEESETAIVPPPLELP-------DVTISL 278 Query: 293 LWHKRNSHNPKIVWLRETIKNL 314 ++ + N +P VW R IK++ Sbjct: 279 IFDRSNELDPGHVWFRNLIKDV 300 >UniRef50_D2C014 Transcriptional regulator, LysR family n=1 Tax=Dickeya dadantii Ech586 RepID=D2C014_DICD5 Length = 303 Score = 80.1 bits (196), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 82/295 (27%), Positives = 132/295 (44%), Gaps = 33/295 (11%) Query: 23 RSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLS--PTPLMVSMEQNLAEWMQ 80 +++T AA R+ ++ A+S L++LRA F D LF+ SP G PTP S+ +A + Sbjct: 22 QNITHAAARLGISQPAMSARLSRLRATFGDQLFIPSPHGRGVLPTPRAESLRPQIASVLH 81 Query: 81 MSNLLLDKPHHQTPRGLKFELAA--ESPLMMIMLNALSKQIYQRYPQATIKLRNWDYDSL 138 + +L+ H + + A E+P +M+ + L Q + P I+LR +S Sbjct: 82 DISAMLEPIHFDAASSSRTFVIALHENPALMLGAD-LVNQFSEAAP--GIRLRFALPESA 138 Query: 139 ---DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPALHQTW 195 + + G++DI + G + A LF D RK HP Sbjct: 139 RLPEQLETGDIDI-YIGVNAGAHD---------AWIRRKLFDDEFATAQRKGHPRGSAPL 188 Query: 196 NLDTFLRYPHISICWEQSD-TWALDNVLQELGRERTIAMSLPEFEQSLFMAAQPDNLLLA 254 +L ++ PH+ + E T +D L LG +R++ MS + + + A D LL Sbjct: 189 DLKSYCALPHLVVSSEGDPFTGFVDQTLAGLGYQRSVVMSTQSYAMAPPIVAGTD--LLC 246 Query: 255 TAP-RYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWLR 308 T P R Q + Q L + PLP + ++ WH +NSH+P VWLR Sbjct: 247 TLPRRMLQRFTQ--TLDIFDPPLPLQ-------PIVISMYWHPKNSHDPANVWLR 292 >UniRef50_A1U796 Transcriptional regulator, LysR family n=3 Tax=Marinobacter RepID=A1U796_MARAV Length = 303 Score = 80.1 bits (196), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 88/321 (27%), Positives = 147/321 (45%), Gaps = 39/321 (12%) Query: 7 TLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTP 66 +LDL L ++ E SV++AA R+ VT SAVS +L +LR F DPLFV S G+ PT Sbjct: 8 SLDLRSLATFVAVLDEGSVSRAAVRLGVTQSAVSHTLERLRQAFGDPLFVKSGRGIVPTD 67 Query: 67 LMVSMEQNLAEWM-QMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQ 125 + ++ + + + L P F +AA ++L L + + Q+ P Sbjct: 68 YALRTGPHIRQLLDDLRTLPSGPPFEPASAEFTFTIAANDYQRDLLLPGLLRILRQQAPG 127 Query: 126 ATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 +++ + D + + D+ S P + +++ L D V+F D + Sbjct: 128 IRLQVIPSGIPNADMLRKEACDLIIS--PHAPETTDIMQR-GLMADRMVVFYDPN----Q 180 Query: 186 KDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRER----TIA--MSLPEFE 239 ++ P +L +L+ HI++ + + +N L G +R T+A LPEF Sbjct: 181 RNAPT-----DLAEYLKADHIALMFATGERPGFENTLHAKGLDRRNVVTVANFSGLPEFL 235 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTL--LWHKR 297 + M LATAP + QL + +PLPFD PFTL LWH+R Sbjct: 236 RGTDM--------LATAPE--RMSAQLMR-DFAWVPLPFDYK-------PFTLLMLWHRR 277 Query: 298 NSHNPKIVWLRETIKNLYASM 318 + ++P W+R + ++ A+M Sbjct: 278 HQNDPAHRWVRNQVNSVAATM 298 >UniRef50_A6W2N0 Transcriptional regulator, LysR family n=1 Tax=Marinomonas sp. MWYL1 RepID=A6W2N0_MARMS Length = 310 Score = 80.1 bits (196), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 78/320 (24%), Positives = 137/320 (42%), Gaps = 25/320 (7%) Query: 4 SITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLS 63 S+ LDL L L L++ER+V +AA R+ ++ SA+S+ L +LR FDDPLF+ + G+ Sbjct: 5 SLQHLDLKSLTGLLYLLEERNVGRAADRLYLSQSAMSRLLNRLRDAFDDPLFIRTSKGMV 64 Query: 64 PTPLMVSMEQNLAEWM-QMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQR 122 PT +++E L + Q++ L + F + + A+++Q Y+ Sbjct: 65 PTSKALALEAPLKLMLEQLAGLWTESEFQPQSSYRTFRMQTTHYQAQAYMPAIAEQFYRE 124 Query: 123 YPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSD-VPC 181 P A+++ SL +D+ LP + + +L + C Sbjct: 125 APFASLETSTLTETSLLNQAEHSLDLALCSD---------YIQLPNSFEKHLLGREKFRC 175 Query: 182 VWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQS 241 V A+ + LD +L Y H+ + S+ D +L E RER A P + Sbjct: 176 VMSANHALAMKDSITLDDYLAYSHVLVNLGGSNPVISDALLGERARERHFAFRTPYMLAA 235 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLL---WHKRN 298 L + +LL++ + + + Q Q LV LP D PF W K Sbjct: 236 LETVGR-TSLLMSNSGLLPERFQQ--QFGLVIKDLPMD--------FPFIHYYSSWPKSV 284 Query: 299 SHNPKIVWLRETIKNLYASM 318 ++P ++W R+ + + + Sbjct: 285 ENDPGVIWFRDICERVVKGL 304 >UniRef50_Q8YZV2 Transcriptional regulator n=2 Tax=Nostocaceae RepID=Q8YZV2_ANASP Length = 305 Score = 80.1 bits (196), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 75/314 (23%), Positives = 139/314 (44%), Gaps = 22/314 (7%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 ++++DLNLL+ ++L +ERSVT AA+R+ + A+S +LA+LR F D LF+ + P Sbjct: 6 LSSIDLNLLVTFEVLFEERSVTAAAQRLYLGQPAMSAALARLRILFQDELFIRIGREMQP 65 Query: 65 TPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGLK--FELAAESPLMMIMLNALSKQIYQR 122 T + + ++ +Q L+ P K F + + ++L L + Q Sbjct: 66 TAKALEISPGISVALQQIRQTLESSQTFDPTTSKHTFAIGSSDYTSYVVLPKLLEVCRQV 125 Query: 123 YPQATIKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPC 181 P +L ++ DS+ D + + E+ + ++ PR +PL +E F + C Sbjct: 126 APSIDFRLIGFEKDSVGDLLEQREIHVALGLFQNPPRQTR---QMPL---FEEHFVGL-C 178 Query: 182 VWLRKDHPALHQ-TWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQ 240 R+ HP + Q + +TF R P + D +D VL + +R + ++ P Sbjct: 179 ---RRGHPVVTQESMTPETFARLPQALFTLRRDDIGEIDKVLAQYNLQRRVVLTTPHL-L 234 Query: 241 SLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 L +L+ R + L + LP+ K ++LW K Sbjct: 235 ILPTVISSSDLVTVIPSRLLTPFAYKDTLEIFELPV-------KTEPWMISMLWSKLTDQ 287 Query: 301 NPKIVWLRETIKNL 314 + +WLR+ +K++ Sbjct: 288 DQASIWLRQMLKSV 301 >UniRef50_A4JED2 Transcriptional regulator, LysR family n=9 Tax=Proteobacteria RepID=A4JED2_BURVG Length = 308 Score = 80.1 bits (196), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 76/317 (23%), Positives = 136/317 (42%), Gaps = 28/317 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 LDLNLL+ L L+ E+++++AA++I+++ SA S +LA+LR +FDD L V + PTP Sbjct: 6 LDLNLLVALDALLSEQNISRAAEKIHLSQSATSNALARLREYFDDELLVQVGRKMEPTPR 65 Query: 68 MVSMEQNLAEWM-QMSNLLLDKPHHQTPRGLK-FELAAESPLMMIMLNALSKQIYQRYPQ 125 +++ + + + ++ + +P + + F L M ++ L + Y + P Sbjct: 66 AEALKDAVRDILVRVDATVTAQPEFVPAQACRLFRLFVSDYTMTTLIPHLFRLAYAQAPG 125 Query: 126 ATIKLRNWDYDSLDAITRGEVDIGFSGRE----SHPRSRELLSSLPLAIDYEVLFSDVPC 181 LR + RGE D+ +E HP EVL + C Sbjct: 126 IGFDLRPQVAYPHRVLERGEADLLIIPKEYCSTEHP--------------AEVLLEETFC 171 Query: 182 VWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQS 241 L + P + ++ HI + + T +Q LG R + E S Sbjct: 172 CVLWEHSPLAKGELTKERYMGAGHIVVQVGEGQTALEAWFMQRLGVVRRV-------EAS 224 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 + P +LL+ T R + +L + LPL + + ++ WHK + + Sbjct: 225 TYSFLSPAHLLVGT-NRIATMHRRLAEAAARDLPLVLRDVPLTVPTMEQSVQWHKHRTSD 283 Query: 302 PKIVWLRETIKNLYASM 318 ++WLR +K A+M Sbjct: 284 QGLMWLRALLKEAVAAM 300 >UniRef50_C3MFM7 Putative transcriptional regulator, LysR family n=1 Tax=Rhizobium sp. NGR234 RepID=C3MFM7_RHISN Length = 409 Score = 79.7 bits (195), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 80/313 (25%), Positives = 143/313 (45%), Gaps = 18/313 (5%) Query: 4 SITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLS 63 ++ DLNLL L++ERSVT+A +I ++ AVS +L +LR DD LF+ + Sbjct: 44 NLNAFDLNLLRVFDALIRERSVTRAGDQIGLSQPAVSSALRRLRDLLDDQLFIRRGNDMI 103 Query: 64 PTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGL--KFELAAESPLMMIMLNALSKQIYQ 121 PTP + + + + + L L K H P + +F L ++ ++ALS+ + Sbjct: 104 PTPRALELGSPVRDALGKIELALHKRRHFDPATIQRRFTLLGSDIFSVMAMSALSRCCAE 163 Query: 122 RYPQATIKLRNWDYDSLDAITRGE-VDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 P ++ L + + + + + + VDI + P + +SS+PL V+ + Sbjct: 164 EAPGISLHLVDSALGNAERLLQEDAVDIALETELNVP---DWVSSMPLLAAPYVVVASAR 220 Query: 181 CVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQ 240 + A + LD F R H++ +D L ++GR+R +A+++P Sbjct: 221 HPGITAAGVAAREAIPLDLFCRLHHVARSSAGVVNCVVDAELAKVGRKRHVALTMP---H 277 Query: 241 SLFMA-AQPDNLLLATAPR-YCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRN 298 +L +A A ++L LAT PR + + L + P+P + + WH R+ Sbjct: 278 TLGVAVATANSLHLATVPRQFAELMASHLGLKIYEAPVPLPATN-------INVFWHSRH 330 Query: 299 SHNPKIVWLRETI 311 +P WLR I Sbjct: 331 DGDPAHQWLRRQI 343 >UniRef50_B8IVY8 Transcriptional regulator, LysR family n=4 Tax=Proteobacteria RepID=B8IVY8_METNO Length = 341 Score = 79.7 bits (195), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 78/320 (24%), Positives = 128/320 (40%), Gaps = 27/320 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 LDLNL+ +M+ER V +A + + ++ SAVS L +LR D LFV + G+ PTP Sbjct: 15 LDLNLIRLFDAVMRERHVARAGQSLGLSQSAVSHGLRRLRTLIGDDLFVRTVQGMEPTPR 74 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQIYQRYPQ 125 ++M + + + + P P +F LAA + ++ AL + P Sbjct: 75 ALAMAVQVRDALTAIEGAI-GPQRFDPASSTRQFRLAATDHITAVVAPALMRTFETEAPL 133 Query: 126 ATIKLR-NWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 A+I +R D + G++DI + S +P + LF D + Sbjct: 134 ASILIRPATRIDLTMQVDLGQIDIVVG----------IFSQIPHRLHARTLFEDRDVLVT 183 Query: 185 RKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 DHP ++ T R P + + ++ D L E G R M + F Sbjct: 184 APDHPEAGGATDIRTLARDPLMVVTVGGTEDGLPDGRLSERGLTRQTEMFDRDALNRAFR 243 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVA-----LPLPFDESQQKKLEVP--------FT 291 AA L P + + L VA L F+ + ++ +P Sbjct: 244 AAGLVPRLSVLQPHFLAVPSLLADSRRVAIVPASLAHGFEAAGVARVSMPPWEPRTMAVQ 303 Query: 292 LLWHKRNSHNPKIVWLRETI 311 ++WH+R +P WLRE + Sbjct: 304 MVWHERWRQDPAHAWLREAL 323 >UniRef50_B8KV86 Putative transcriptional regulator, LysR family n=1 Tax=gamma proteobacterium NOR51-B RepID=B8KV86_9GAMM Length = 302 Score = 79.3 bits (194), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 78/315 (24%), Positives = 143/315 (45%), Gaps = 23/315 (7%) Query: 4 SITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLS 63 ++ ++DLNLL ++ E ++T AA +I ++ A+S +L +LR DD LFV++ G+ Sbjct: 2 NLRSVDLNLLTIFDAIVSEGNLTHAADKIGMSQPAISAALGRLRVTLDDELFVSTGRGVK 61 Query: 64 PTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRY 123 PT + +++ + +L D T G E ES + ++++ Sbjct: 62 PTQRALQLQE------PVRRILEDVRAALTSTG---EFDPESSDRVFTISSIDYGGIVVI 112 Query: 124 PQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSREL-LSSLP-LAIDYE--VLFSDV 179 P+ L+ + I + G + R+ S +L ++S P L+ D+E +L ++ Sbjct: 113 PRLLRYLQKQQSPIIVNINPSQT--GEAHRDVDRSSGDLTITSDPLLSPDHECKLLRREL 170 Query: 180 PCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFE 239 P RKDHP + + +++ F R H+ + + ALD L +LG R +P F Sbjct: 171 PYCLARKDHPDITGSLSVEQFQRNRHVLLYSNNTRGLALDAHLLQLGFNRECGARVPSFF 230 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 ++ D ++ T PR + Q L L PFD + ++WH+ + Sbjct: 231 NMPYIVGNTD--MICTMPRQ-MAEDFARQFGLQVLAAPFD-----NWTASYFMVWHRSFN 282 Query: 300 HNPKIVWLRETIKNL 314 + WLR++I L Sbjct: 283 GDSGHCWLRDSIFRL 297 >UniRef50_Q391Q9 Transcriptional regulator, LysR family n=1 Tax=Burkholderia sp. 383 RepID=Q391Q9_BURS3 Length = 322 Score = 79.3 bits (194), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 85/332 (25%), Positives = 144/332 (43%), Gaps = 47/332 (14%) Query: 1 MKKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPL 60 MK LDLNLL LM E +VT+AA+R+ ++ SAVS +L +LR D LF + Sbjct: 1 MKDVFRQLDLNLLRVFAALMAEGNVTRAAERLALSQSAVSNALRRLRESLGDVLFEKTVS 60 Query: 61 GLSPT-----------PLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMM 109 G+ PT P +++Q ++ D+ Q RG F +A + Sbjct: 61 GVRPTARARELWSAVQPHFDALKQAISP---------DQFDPQEHRG-TFTIAMSDYSVE 110 Query: 110 IMLNALSKQIYQRYPQATIKLRNWDYDSLDAI-TRGEVDIGFSG--RESHPRSRELLSSL 166 ++ L+ + + P I+L + L A+ RG VD+ G +S P S Sbjct: 111 RIMPRLAHFMGEHAPSMRIELTPFSVADLPAMFDRGGVDLAIGGYLNDSSPSS------- 163 Query: 167 PLAIDYEVLFSDVPCVW---LRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQ 223 + ++ P W +RKDHP L FL H+ + + D++L Sbjct: 164 --GVRTHEMW---PIHWSCLMRKDHPLAKGPLTLKRFLAARHLDVGFSGMRVPVYDSLLS 218 Query: 224 ELGRERTIAMSLPEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQ 283 G +R + ++L + +L + + D + P + +H+ LV+ P + Sbjct: 219 AHGLQRNLVLTLNAYSPALAIIRESD--FIGVLPTTLLDLS-IHEKELVSRQPPVRMPAR 275 Query: 284 KKLEVPFTLLWHKRNSHNPKIVWLRETIKNLY 315 P+ ++WH+R +P WLR+TI +L+ Sbjct: 276 -----PYCVIWHQRWDSHPAHRWLRQTIVSLF 302 >UniRef50_Q7MG62 Transcriptional regulator n=6 Tax=Vibrionales RepID=Q7MG62_VIBVY Length = 313 Score = 79.3 bits (194), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 77/315 (24%), Positives = 137/315 (43%), Gaps = 29/315 (9%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 + LDLNLL +L QER++ KAA+R+ ++ AVSKSL +LR F D LFV + GL Sbjct: 6 FSKLDLNLLRTFLILNQERNMRKAAERLFISQPAVSKSLQRLRDSFGDELFVKTYHGLKA 65 Query: 65 TPLMVSMEQNLA----EWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIML-NALSKQI 119 T + ++LA + M + N Q R L+ + SP ++ + L I Sbjct: 66 TEFAEQLAESLAPVMNDLMHVVNYSGGFDPSQIDRPLRIVV---SPFLLTGIAQRLFTLI 122 Query: 120 YQRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 P A I+ NW S++ I +V +G + + LP + + + D Sbjct: 123 RAEAPHAQIQFLNWGKSSVEDIVNDKVHLGLN---------YAIERLPKEVLHTTIAKDT 173 Query: 180 PCVWLRKDHPALHQTWNLDTFLRYPH---ISICWEQSDTWALDNVLQELGRERTIAMSLP 236 ++R DHP + ++ ++ I+ W + + A + +LQ G + + Sbjct: 174 FRAYVRDDHPYKQSSARVEDGHQFEFSTLIAADWNYTQSVA-EKLLQIYGHQAKVGFRSE 232 Query: 237 EFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHK 296 + + D L L + +Y N Q L ++ + F + L + +H+ Sbjct: 233 LPSAVIEVTKNSDMLFLGS-----RYLNLDGQSGLRSIDISFGPT---PLNTDINVYFHE 284 Query: 297 RNSHNPKIVWLRETI 311 + +P I+WL+ + Sbjct: 285 KYKASPTILWLKRKL 299 >UniRef50_D0DE94 Transcriptional regulator, LysR family n=1 Tax=Citreicella sp. SE45 RepID=D0DE94_9RHOB Length = 314 Score = 79.0 bits (193), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 81/305 (26%), Positives = 128/305 (41%), Gaps = 33/305 (10%) Query: 22 ERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSMEQNLAEWMQM 81 E SV AA+R+ ++ SA+S++LA+LR DPL V + G+ TP ++ + + Sbjct: 18 EGSVVDAARRLGLSASAMSRTLARLRDATGDPLLVRAGRGMVLTPHAEALRERVPHLAAE 77 Query: 82 SNLLLDKPHHQT--PRGLK--FELAAESPLMMIMLNALSKQIYQRYPQATIKLRNWDYDS 137 +L +P T P L+ F + A + L + + +R P I D Sbjct: 78 VEAVL-RPAETTLDPESLQRDFVIRANDGFIAAYGATLLRLVRERAPAVRILFVQKDASP 136 Query: 138 LDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPALHQTWNL 197 A+ G D+ +L + + L +D +R HP Q Sbjct: 137 ARALRDGLCDLELG----------ILRDTAPELKVQRLLTDHFVGVVRAGHPLAGQDITA 186 Query: 198 DTFLRYPHI-SICWEQSD-TWALDNVLQELGRERTIAMSLPEFEQSLFMAAQPDNLLLAT 255 F I SI + +D T +D L +G +R +P F +L MA Q D L+A Sbjct: 187 RDFAESDSIVSILHQPADFTHVVDRALAGIGLKRRRTFQVPSFLVALSMAQQSD--LVAV 244 Query: 256 APRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPF-------TLLWHKRNSHNPKIVWLR 308 P Q Y ++ + + AL LP E E+PF +L+WH R +P WLR Sbjct: 245 VP---QSYARMERRRMAALGLPGPEI----FELPFDTGEIVISLIWHPRMDSDPANRWLR 297 Query: 309 ETIKN 313 E ++ Sbjct: 298 ELVRE 302 >UniRef50_B0SY67 Transcriptional regulator, LysR family n=1 Tax=Caulobacter sp. K31 RepID=B0SY67_CAUSK Length = 322 Score = 79.0 bits (193), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 52/185 (28%), Positives = 85/185 (45%), Gaps = 13/185 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 LDLNLL L++E S T+A ++ +T SAVS +L +LR D LFV P GL TP Sbjct: 9 LDLNLLRVFDALLEEESATRAGSKLGLTQSAVSHALGRLRLSLGDELFVRGPAGLQATPR 68 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRGLK-FELAAESPLMMIMLNALSKQIYQRYPQA 126 V M + + +++ + PH + F + A + L +++ + ++I P Sbjct: 69 AVEMGRPIRAALKLMETAVTVPHFDPAADERVFHVGASAYLCSVLMPGVVRRIQTEAPGV 128 Query: 127 TIKLRNWDYDSLDAITRGEVDIGFSGRES-HPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 +++R + + + G +D+ G E PR Y LF + +R Sbjct: 129 KLRIRGVEGALAEDLDHGRLDLVIGGFEHVAPR-----------FAYTPLFKETGVWVIR 177 Query: 186 KDHPA 190 DHPA Sbjct: 178 ADHPA 182 >UniRef50_Q46YJ7 Transcriptional regulator, LysR family n=5 Tax=cellular organisms RepID=Q46YJ7_RALEJ Length = 394 Score = 79.0 bits (193), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 82/314 (26%), Positives = 135/314 (42%), Gaps = 27/314 (8%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPT-- 65 LD LL L L+ E+SVT+ A R+ + A+S +L +LR D + V G+ PT Sbjct: 86 LDTYLLRVLHTLLTEQSVTRTAVRLGQSQPAISNTLKRLREITGDAILVRGKSGMVPTER 145 Query: 66 --PLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRY 123 L+ EQ+LA +++ T R F L A L L + +++ + Sbjct: 146 GRELLELAEQSLAAMDRIARPPQQFDPATTTR--TFHLGAPDYLDAFFLPNIVERVRRLA 203 Query: 124 PQATIKLR--NWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPC 181 P A + + D L+ + +G++DI S P E L P LF D Sbjct: 204 PGAKLFVHPMTSSSDFLEDLEQGQLDIVIGNWLSPP---EHLHISP-------LFDDEVV 253 Query: 182 VWLRKDHPALHQTWNLDTFLRYPHISIC-WEQSDTWALDNVLQELGRERTIAMSLPEFEQ 240 L HP + L +L PH++ + +D L E G +R I ++LP F Sbjct: 254 CMLGAQHPLARKGLTLKHYLEMPHLAPAPYASMQRSMIDQALAEQGYKRNIQVTLPYFGL 313 Query: 241 SLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 ++ + D ++ T ++ +Y Q LP+ +P P + + F LWH+R Sbjct: 314 VPYVLMKTD-MVFTTGRQFAAHYAQY--LPIRMVPSPVTFPRMR-----FYQLWHERCHA 365 Query: 301 NPKIVWLRETIKNL 314 P ++W+R I + Sbjct: 366 APDVMWMRRMIAEV 379 >UniRef50_Q15Y73 Transcriptional regulator, LysR family n=1 Tax=Pseudoalteromonas atlantica T6c RepID=Q15Y73_PSEA6 Length = 302 Score = 79.0 bits (193), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 75/311 (24%), Positives = 127/311 (40%), Gaps = 45/311 (14%) Query: 19 LMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL----------- 67 L E+++T+ A +++TPSAVS S+ +LR DPLF S + PTP Sbjct: 21 LYVEQNMTRTADALHITPSAVSHSIKRLRECLGDPLFQRSNNRMLPTPACQRMAPLIIDN 80 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQAT 127 + + Q + W + L HH F + L +L AL++++ P+ T Sbjct: 81 LTRLRQIMQHWGEFQP--LTSEHH-------FRIGMHYALEPSILPALTERLALLAPKVT 131 Query: 128 IKLRNWDYDSLDA-ITRGEVDIGFSGRESHPRSRELLSSLPLA--IDYEVLFSDVPCVWL 184 D +L + G +D+ +LP+ + ++ L D CV + Sbjct: 132 FSSVRVDRITLTRDLGAGHIDLALD------------VALPIKSPVLHQKLIDDEFCVLV 179 Query: 185 RKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 RKDHP L D + HI + S D + Q+ G R + + + + M Sbjct: 180 RKDHP-LRDRLTKDAYFNAEHIGVSNRSSGASVEDLLFQQQGLSRKVVIRCQNYFSAKGM 238 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 A ++LL T PR + + + LV+LP+ ++ L WHK + + Sbjct: 239 VACSNHLL--TVPRRIAEHLKQDDVQLVSLPVNI-------ADISTHLYWHKNTEQDSAL 289 Query: 305 VWLRETIKNLY 315 WLR ++ Sbjct: 290 SWLRALFDGIF 300 >UniRef50_Q8XRG7 Probable transcriptional regulator transcription regulator protein n=1 Tax=Ralstonia solanacearum RepID=Q8XRG7_RALSO Length = 308 Score = 79.0 bits (193), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 75/318 (23%), Positives = 128/318 (40%), Gaps = 23/318 (7%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 KS LDLNLL + + + R++T +R+ ++ AVS+ LA+LR + D LFV G+ Sbjct: 9 KSAPHLDLNLLELFESIWRTRNLTATGERLGLSQPAVSRGLARLRETYGDELFVRHRRGV 68 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQIYQ 121 PT ++ + ++ + + ++KP +F +A L L+ + Sbjct: 69 EPTAFAQTLAEPVSAALAIVRRTIEKPTFSAAEDARRFRVALSDIGERYFLPRLAAWLAD 128 Query: 122 RYPQATIKLRNWDYDS-LDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 PQ +I + + L + GE+D+ L L + + LF + Sbjct: 129 HAPQVSIDTVSASREELLTGLASGEIDLAVG----------FLPGLGKQVHEKRLFQEKF 178 Query: 181 CVWLRKDHPALHQTWNLDTFLRYPHISICWEQSD-TWALDNVLQELGRERTIAMSLPEFE 239 R+DHP + PH+ + A++ VL +AM + F Sbjct: 179 VYIARRDHPGIDGRLQASQLRALPHVVGSPHGTQHAAAVEKVLTGPRVRAVVAMRVGSFL 238 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLH-QLPLVALPLPFDESQQKKLEVPFTLLWHKRN 298 + A D L+A P H L L+A P+ F EV +++WH+R Sbjct: 239 SIGPIVADSD--LVAVVPSNLAALVSEHVGLQLIAPPVRF-----PSFEV--SMVWHRRF 289 Query: 299 SHNPKIVWLRETIKNLYA 316 +P WLR L+ Sbjct: 290 HGDPGGAWLRGVFSQLFG 307 >UniRef50_A9AMZ1 Transcriptional regulator, LysR family n=6 Tax=Proteobacteria RepID=A9AMZ1_BURM1 Length = 353 Score = 79.0 bits (193), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 73/309 (23%), Positives = 133/309 (43%), Gaps = 35/309 (11%) Query: 22 ERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSMEQNLAEWMQM 81 ERSVT AA+R+N++ SA S++LA+LRA D L + + L TP + + + + Sbjct: 52 ERSVTGAARRLNLSVSATSRTLARLRALTGDRLLLQAGRTLVLTPYAEQLSRRIPALARE 111 Query: 82 SNLLLDKPHHQTPRGL---KFELAAESPLMMIMLNALSKQIYQRYPQATIKLR---NWDY 135 + +L + ++ +F L A + ++ AL+ ++ + P ++ +W+ Sbjct: 112 AESVLSRAAYRFDSATLAQRFTLCAGEGFVDLLGAALTNRVRRAAPGVQLRFVPKPDWN- 170 Query: 136 DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPALHQT- 194 A+ G VD+ ++ + I VLF+D R HP L Sbjct: 171 --AQALREGLVDLEIG----------VVKTAAPEIRTRVLFTDRYVGLCRIGHPLLAAGE 218 Query: 195 WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQPDNLLLA 254 ++ +L Y H++I +D L+ G R + + +P + ++ + D LLA Sbjct: 219 IDMQRWLAYDHVTISRTGEADNPIDARLESTGVPRNVPIVVPSYTGAMQLVRHSD--LLA 276 Query: 255 TAPRYCQY------YNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWLR 308 P C Y + + ALPLP + +WH R H+P WLR Sbjct: 277 IVPHSCLGNAFMPDYAAENGVQSFALPLPLPAFN-------ISAIWHPRLDHDPAHRWLR 329 Query: 309 ETIKNLYAS 317 + ++ + A+ Sbjct: 330 DEVRAVCAA 338 >UniRef50_Q13QG3 Transcriptional regulator, LysR family n=9 Tax=Proteobacteria RepID=Q13QG3_BURXL Length = 316 Score = 78.6 bits (192), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 80/318 (25%), Positives = 136/318 (42%), Gaps = 37/318 (11%) Query: 9 DLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLM 68 DLNLL + RS+T A +R+ +T AVS +L +LRA FDDPLFV +P G+ PT Sbjct: 10 DLNLLRVFLAISDLRSLTAAGERLGLTQPAVSHALRRLRALFDDPLFVRTPTGMVPTDAA 69 Query: 69 VSMEQNLAEWMQMSNLLLDKPHHQTP----RGLKFELAAES-----PLMMIMLNALSKQI 119 + + L + + N+ + + P R + ++ S P ++ ML+ ++ I Sbjct: 70 LRLHAPLTQAFGIINVAVQQIARFDPATAQRVFRVSMSDMSEFYFLPPLLSMLDRSARGI 129 Query: 120 YQRYPQATIKLRNWDYDSLDAITR-GEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSD 178 +++ N DS+ + R GE+D+ + L + LF D Sbjct: 130 -------RLEIANVSVDSVSSAMRSGEIDLALG----------YVPGLDTGCVSKTLFVD 172 Query: 179 VPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEF 238 +R HP Q + ++ + ++ L+EL R I + LP F Sbjct: 173 EHVCVVRAGHPLRKQKPTKEDLANLRYVYASTNATGHRMVEQWLEELNLRRDIVLRLPHF 232 Query: 239 EQSLFMAAQPDNLLLATAPR-YCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKR 297 + + D L PR Q +N+ + LPLPF +E+ + H + Sbjct: 233 VVAPEIVQHTD--LAMIFPRSIAQRFNRNKAFRI--LPLPF---ALPPIEI--QVHSHSQ 283 Query: 298 NSHNPKIVWLRETIKNLY 315 S +P I WL + I +++ Sbjct: 284 FSADPGIAWLLDAIYDMF 301 >UniRef50_Q486J0 Transcriptional regulator, LysR family n=4 Tax=Gammaproteobacteria RepID=Q486J0_COLP3 Length = 306 Score = 78.6 bits (192), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 84/322 (26%), Positives = 143/322 (44%), Gaps = 49/322 (15%) Query: 9 DLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLM 68 D +L+ +++E+S TKAAKR+ ++ SAVS+ + +L+A F D LF+ G+ PT Sbjct: 5 DYSLIPTFVAIVEEKSYTKAAKRLGISQSAVSQGVTRLQAVFKDTLFIRGSRGVEPTQFS 64 Query: 69 VSMEQNLAEWMQMSNLLLDKPHHQTPRGLK----FELAAESPLMMIMLNALSKQIYQRYP 124 + + LA ++ N+ P ++ +K F +++ S +L LS + Q P Sbjct: 65 LDIYPTLASSVE--NIAFMMPEYKKFSAVKCEKQFVISSLSVFGFTILPPLSALMSQHAP 122 Query: 125 QATIK---LRNWDYDSLDAITRGEVDIGFSGRES-HPRSRELLSSLPLAIDYEVLFSDVP 180 A++K L N D+ ++ + D+ + +P+ R +V+ D Sbjct: 123 LASVKIEPLNNHDFTNM--LRSQHFDLVIDAHSNQYPQLRS-----------KVIMEDTL 169 Query: 181 CVWLRKDHPALH-QTWNLDTFLRYPHISIC-WEQSDTWALDNVLQ--ELGRERTIAMS-- 234 CV R DHP L + ++D FL H++ +Q + L+ E+ +R IA Sbjct: 170 CVMCRIDHPRLSGDSISIDEFLAEKHVTHSQLDQKGGYLSGKGLKEDEILNQRKIAWQAA 229 Query: 235 -----LPEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVP 289 LP E ++A P L+ +Y Y QL QL L P + Sbjct: 230 SIMEMLPVIECCDYIALLPQRLV----DKYRHIY-QLKQLHSNFLLDP----------IK 274 Query: 290 FTLLWHKRNSHNPKIVWLRETI 311 + WH +++P WLRE I Sbjct: 275 VAMYWHSSRTNDPSHKWLREQI 296 >UniRef50_C5CZA2 Transcriptional regulator, LysR family n=1 Tax=Variovorax paradoxus S110 RepID=C5CZA2_VARPS Length = 317 Score = 78.6 bits (192), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 82/332 (24%), Positives = 135/332 (40%), Gaps = 51/332 (15%) Query: 4 SITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLS 63 +I ++DLNL L Q + RSVT A R+ +T SAVS +L ++R F+D LFV S G+ Sbjct: 2 NINSIDLNLFLVFQAIYATRSVTLAGDRLGMTQSAVSNALKRMRERFNDALFVRSADGMV 61 Query: 64 PTP----LMVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQI 119 PTP L+ +E+ +A +Q + +G FE S + I +N + + + Sbjct: 62 PTPVAERLIAPIEEGIACLVQAVD-----------QGRTFEPETSSRIFRIAVNDIGQLV 110 Query: 120 -------YQRYPQATIKLRNWDYDSLDAITR---GEVDIGFSGRESHPRSRELLSSLPLA 169 R ++ D +A R G++D+ E ++ + Sbjct: 111 MVPELISVARGIAPGVRFETVDVSVAEARQRMLHGQIDVALGSWE----------AMGPS 160 Query: 170 IDYEVLFSDVPCVWLRKDHP-ALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELG-- 226 + LF + V + K P + LD +L HI+ + + L L+ G Sbjct: 161 FYQQRLFDETFVVLMSKASPLGTRERIELDDYLAAEHIAYRPQGTTDSQLQQTLERAGAL 220 Query: 227 -RERTIAMSLPEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKK 285 R R + + + +A LL TAP + L ++ PF+ Sbjct: 221 DRRRVVLTAAHSLGLTSIVATSG---LLLTAPARLAKAMVASRADLHSVDAPFEVR---- 273 Query: 286 LEVPFTLL--WHKRNSHNPKIVWLRETIKNLY 315 PF + WH+R + WLRE I L+ Sbjct: 274 ---PFEIRQQWHERFHQDSGNRWLRELIFGLF 302 >UniRef50_C5CV67 Transcriptional regulator, LysR family n=1 Tax=Variovorax paradoxus S110 RepID=C5CV67_VARPS Length = 300 Score = 78.6 bits (192), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 83/314 (26%), Positives = 128/314 (40%), Gaps = 32/314 (10%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 ++ +DLNLL L LM+ER V++AA+R+++ AVS +LA+LR DPL V + P Sbjct: 6 LSRIDLNLLTVLAALMRERHVSRAAQRLHLGQPAVSHALARLRELTGDPLLVRQGRVMEP 65 Query: 65 TPLMVSMEQNLAEWMQMSNLLLD-----KPHHQTPRGLKFELAAESPLMMIMLNALSKQI 119 T +++ Q L ++ +P P F + L + ML L + + Sbjct: 66 TERALALMQGLGPALEQIEATFRAQADFEPARAAP---VFRIGLTDDLQIAMLPRLLRAL 122 Query: 120 YQRYPQATIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSD 178 P+A + Y ++ + G+V + L LP + + Sbjct: 123 SVEAPRARLVTLTVCYRNAARYLDEGQVSAVMT----------FLKDLPAGAKIRKVRT- 171 Query: 179 VPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEF 238 LR D A T LD + R H+ + + +D L ELGR+R +A S+P+F Sbjct: 172 ARFALLRADTAAARLT--LDDYCRRRHVLVTYAGDLCGTVDETLNELGRQREVAFSVPQF 229 Query: 239 EQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDE-SQQKKLEVPFTLLWHKR 297 A LLAT P + Q L LPF+ S Q KL W Sbjct: 230 GS--LPAVLAGTELLATVPEHVALALS-AQGGLRCEALPFESPSYQIKLA------WRAV 280 Query: 298 NSHNPKIVWLRETI 311 + WLR + Sbjct: 281 TDKDAAETWLRRAM 294 >UniRef50_Q5P743 Transcriptional regulator, LysR family n=2 Tax=Betaproteobacteria RepID=Q5P743_AZOSE Length = 301 Score = 78.6 bits (192), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 70/314 (22%), Positives = 125/314 (39%), Gaps = 22/314 (7%) Query: 7 TLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTP 66 TL++ L + + RSV++AA+ + + AVS +L KLR F DPLFV + G+ PTP Sbjct: 3 TLEIRQLSVFDEIYKTRSVSRAAENLGLGQPAVSIALGKLREHFGDPLFVRTSAGMEPTP 62 Query: 67 LMVSMEQNLAEWMQMSNLLLDKPHHQTPRGLK--FELAAESPLMMIMLNALSKQIYQRYP 124 L + + + + + P + F +A +++L L +++ P Sbjct: 63 LGEELAEPIRVAVAAVSAASGHRAEFDPTRARRTFRIAMTDISQLVLLPRLWERLRTVAP 122 Query: 125 QATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 I + N ++ + GEVD+ + L + LF Sbjct: 123 GIHIDIANLSANTAGMLESGEVDVALG----------FMPQLEAGFYQQALFRQHYVCMA 172 Query: 185 RKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 HP + + L F H + + +D + +R + + +P F ++ Sbjct: 173 SATHPRIRRGLTLAQFEAEEHAVVSTSGTGHLIIDREIARQDIKRRVVLRIPSFVGIAYV 232 Query: 245 AAQPDNLLLATAP-RYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 + LL T P R + +L + +P P E K+ WH R +++P Sbjct: 233 VER--TALLVTIPQRLGELLADEERLRVYPVPFPLPEYAVKQ-------HWHGRYNNDPG 283 Query: 304 IVWLRETIKNLYAS 317 WLR I+ L +S Sbjct: 284 NRWLRALIQELLSS 297 >UniRef50_B7V4S2 Probable transcriptional regulator n=7 Tax=Pseudomonas aeruginosa RepID=B7V4S2_PSEA8 Length = 304 Score = 78.6 bits (192), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 77/316 (24%), Positives = 132/316 (41%), Gaps = 32/316 (10%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 + +DLNLL+ L L+ ER V++AA+R+ ++ AVS +L +LR F DPL V + Sbjct: 7 LRRIDLNLLVVLDALLSERHVSRAAQRLAMSQPAVSHALGRLRELFGDPLLVRVKSRMQL 66 Query: 65 TPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGLK-FELAAESPLMMIMLNALSKQIYQRY 123 T L + + L + ++ P + R + F L ++L AL +Q Sbjct: 67 TSLALELAPKLQASLDQVRGVIGGPTFEPVRSRRHFRLGMSDYGAWVVLPALLRQQQALA 126 Query: 124 PQATIKL-RNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSD-VPC 181 P + + + ++ + G++D + LP + LF + C Sbjct: 127 PGVSFGIVQEPRLETARQVAEGQLDCALG----------VFPLLPEGVRARRLFEERFVC 176 Query: 182 VWLRK--DHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFE 239 V R D P +LD +L H+ + + + +D+ L++ G R +A++LP F Sbjct: 177 VCRRSLFDRP---DGLSLDRYLAARHVRVSLQDNPAEEVDSALEKRGLRRQVALTLPHFT 233 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLP---FDESQQKKLEVPFTLLWHK 296 + + A D L+L A R + +L L PL FD + +W Sbjct: 234 VAPALLAGTD-LVLTIAERTLERLRLPEELALCEPPLAIPRFD----------YVQIWRG 282 Query: 297 RNSHNPKIVWLRETIK 312 WLRE I+ Sbjct: 283 DAEREAAGAWLREQIQ 298 >UniRef50_C6B2W9 Transcriptional regulator, LysR family n=4 Tax=Rhizobiaceae RepID=C6B2W9_RHILS Length = 334 Score = 78.6 bits (192), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 71/294 (24%), Positives = 131/294 (44%), Gaps = 38/294 (12%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 ++ +DLNLL+ + +M+ER V ++ +R+N++PSA+S L +LR DPLF+ +P G+ P Sbjct: 7 LSRIDLNLLVLFETVMEERHVGRSGQRLNLSPSAISHGLGRLRMLLGDPLFLKTPKGVVP 66 Query: 65 TPLMVSMEQNLAEWMQMSNLLL------DKPHHQTPRGLKFELAAESPLMMIMLNALSKQ 118 T + +A+ + ++ D H Q +F + A + + L L Sbjct: 67 TDRAEELAAPIADILARVRSVVATAEPFDPAHSQR----RFTIGAPDGVSSVFLPPLLDL 122 Query: 119 IYQRYPQATIKLRN-------------WDYDSLDAITRGEVDIGFSGRESHPRSRELLSS 165 + + P I +R W D+L A+ ++DI + + Sbjct: 123 LAKFAPGIAISVRQLLPKQGEPSPDLAW-RDALAALEARDMDIAIIPQ----------AG 171 Query: 166 LPLAIDYEVLFSDVPCVWLRKDHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQE 224 P+ +L+ + + R+ HP L QT L T+ H+ + +DN+L Sbjct: 172 FPIRFASLLLYEEDFVIAARQCHPFLIDQT--LATYCAAQHLVVSHLGDTHGFVDNLLAS 229 Query: 225 LGRERTIAMSLPEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPF 278 G R +A+++P F +L + A+ D + A R+ + + + V PLP Sbjct: 230 HGCSRRVALTVPNFMLALAVLAETD-FISALPRRFVEMHAARFGVVSVNPPLPL 282 >UniRef50_A9FJR3 Transcriptional regulator, LysR family n=2 Tax=Sorangium cellulosum 'So ce 56' RepID=A9FJR3_SORC5 Length = 306 Score = 78.6 bits (192), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 73/328 (22%), Positives = 141/328 (42%), Gaps = 44/328 (13%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 + +DLNLL L ++ ER+VT+AA+R+ +T AVS +L +LR F+D L V ++P Sbjct: 9 LRAVDLNLLTVLDAVLTERNVTRAAERLGMTQPAVSSALNRLRLLFNDDLIVRRGKEMAP 68 Query: 65 TPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYP 124 TP +++ + + + + L F+ A + + + + R+ Sbjct: 69 TPRALALAGPIRKALDLIQASLAHTG-------AFDCTASRTFRLGITDIGEALLLPRFL 121 Query: 125 Q------ATIKL---RNWDYDSLDAITRGEVD-----IGFSGRESHPRSRELLSSLPLAI 170 Q A ++L R + + G+++ I G E R+R + Sbjct: 122 QWLEQLGARVRLDFCREPGTSLQNEMRLGKIELVLDHIAIPGEEFR-RTR--------VL 172 Query: 171 DYEVLFSDVPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERT 230 D E + +R+DHP + + LD ++ H+ I + T + + +GR R Sbjct: 173 DLEFV------TLVRQDHPTVGPSLTLDEYMALEHVIIEPREGQTNLAEQIQAAVGRARC 226 Query: 231 IAMSLPEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPF 290 + + +P + F+ +Q NL+ + + Q + +V+ PLP +P Sbjct: 227 VRVQVPRYLSMPFIVSQ-SNLVCTLPLPLARLFEQHFPVRVVSCPLPIQ-------PIPL 278 Query: 291 TLLWHKRNSHNPKIVWLRETIKNLYASM 318 ++WH +P WLR ++ L + + Sbjct: 279 FMMWHACQDGDPAHEWLRRSLIELCSRV 306 >UniRef50_B7X552 Transcriptional regulator, LysR family n=1 Tax=Comamonas testosteroni KF-1 RepID=B7X552_COMTE Length = 319 Score = 78.2 bits (191), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 78/334 (23%), Positives = 143/334 (42%), Gaps = 57/334 (17%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 ++++LL CL+ L+ E+SVT+AA R+ ++ +S +L +LR DPL V G+ TP Sbjct: 6 IEISLLFCLEALLAEKSVTRAANRLGMSQPGMSNALNRLRVLTRDPLLVRVGKGMELTPR 65 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELA-AESPLMMIMLNALSKQIYQRY--- 123 V + + + + + + P FE A AE L + M +A++ ++ R Sbjct: 66 AVELAGLVKSGLSVLDAIFSDPR-------PFEPARAEGVLTVAMSDAMALELGPRLTAR 118 Query: 124 -----PQATIKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFS 177 PQ ++++ D +L + G++D+G +S+P + L S Sbjct: 119 FDREAPQLCMQIQRLDQSNLFGLLAEGQLDLGIG----------YATSVPKQMYASDLLS 168 Query: 178 DVPCVWLRKDHPALHQTWNLDTFLRYPHI-------SICWEQS---DTWALDNVLQELG- 226 + HP + +L+ F+R H+ SI W +S D N+++ +G Sbjct: 169 QSLSAIRSRQHPRIAAQLSLEGFMRERHVLTAAPTRSISWAESSVADALKARNLVRSVGA 228 Query: 227 RERTIAMSLPEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLV--ALPLPFDESQQK 284 R +I ++ P S + P L +A LP+ ALP+P + Sbjct: 229 RVNSILLAPPIVASSSMLCTMPTWLARRSA----------ESLPITLHALPVPIATFKT- 277 Query: 285 KLEVPFTLLWHKRNSHNPKIVWLRETIKNLYASM 318 T++WH+R W R ++ + +M Sbjct: 278 ------TMVWHERTHRQELHHWARGVVREVVKAM 305 >UniRef50_A6CYC8 Probable transcription regulator protein n=1 Tax=Vibrio shilonii AK1 RepID=A6CYC8_9VIBR Length = 294 Score = 78.2 bits (191), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 81/309 (26%), Positives = 141/309 (45%), Gaps = 29/309 (9%) Query: 12 LLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSM 71 LL LQ L++ RS+T AA+R+ VT SA+S++L +LRA F DPL + T S+ Sbjct: 8 LLRPLQALLETRSLTDAAERLRVTQSAMSRNLTQLRAEFSDPLLIREGKTFVLTARGESL 67 Query: 72 EQNLAEWMQ-MSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQATIKL 130 ++ L + + L D + + +A S + ++ LS + + P A+ + Sbjct: 68 KRALPHVLSAIEGLYSDSSIEPSEIKRTYRIAYSSFSSLSLVKDLSLALMSQAPNASFSM 127 Query: 131 RNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR-KDHP 189 W + +D ++ +VDI + P R +P I Y +D V +R K+H Sbjct: 128 ELWQHRDIDELSTEDVDILIT-----PAHR-----IPDNI-YGKRIADNDYVVVRSKEHH 176 Query: 190 ALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQPD 249 QT L+ +L H+ + + ++ L +R +A++L ++L + + D Sbjct: 177 KSQQTLCLERYLESRHVLLHLVANIDLEVNEFFANLSVKRNVALTLSSAREALDVVRESD 236 Query: 250 NLLLATAPRYCQYYNQLHQLP----LVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIV 305 LL T P+Y + +LP PLPF + LLWH + ++ Sbjct: 237 --LLVTLPKYL-----VERLPDKSDFDIHPLPFSLPSHS-----YYLLWHAKWQNDVAHR 284 Query: 306 WLRETIKNL 314 WLR+T+ +L Sbjct: 285 WLRDTVFSL 293 >UniRef50_B9QU66 LysR substrate binding domain protein n=1 Tax=Labrenzia alexandrii DFL-11 RepID=B9QU66_9RHOB Length = 307 Score = 78.2 bits (191), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 72/299 (24%), Positives = 129/299 (43%), Gaps = 21/299 (7%) Query: 21 QERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSMEQNLAEWMQ 80 + R A + +T SA+S++L +LR F D LF+ P G+ PT ++++ +A ++ Sbjct: 27 KHRKAMDVAHELGLTQSAISQALKRLREVFGDELFLRRPHGMEPTATALALQAPIANAVE 86 Query: 81 MSNLLLDKPHHQTPRGL--KFELAAESPLMMIMLNALSKQIYQRYPQATIKLR-NWDYDS 137 L PR + LAA +++ AL+ ++ P + + ++ Sbjct: 87 TLRQALGVARAFDPRTATGQVRLAAMHAEQAVLIPALAARLRNTAPGLDLSVVPRGRREA 146 Query: 138 LDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPALHQTWNL 197 + ++ GEVD+ ++P EVL+ D V +L NL Sbjct: 147 MQSLQDGEVDLALG----------FFRNVPKTCRAEVLYEDTYLVAGSPQTLSLETPLNL 196 Query: 198 DTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQPDNLLLATAP 257 +T+ HI +D L++LGR+R + + LP F +L AA D L+ A Sbjct: 197 ETYCAMDHILTSPSAQLHGVVDTHLEKLGRQRRVVLGLPAFVPALAAAAASDALITLPA- 255 Query: 258 RYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWLRETIKNLYA 316 R + + + LV P D P +++WH+RN +P+ W+R + + A Sbjct: 256 RVAEAFAG--RFGLVTCRPPLDIP-----SFPVSVVWHRRNDSDPQTQWIRSQLNHCDA 307 >UniRef50_C9PE36 Probable transcription regulator protein n=2 Tax=Vibrio RepID=C9PE36_VIBFU Length = 311 Score = 78.2 bits (191), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 76/305 (24%), Positives = 134/305 (43%), Gaps = 25/305 (8%) Query: 9 DLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLM 68 + LL L L++ R++T AA+R+NVT A+SK+L +R F DP+ + + T Sbjct: 3 NYKLLPALMALLETRNLTDAARRLNVTQPAMSKALRLIRDEFQDPILIRDGQQFTLTQRG 62 Query: 69 VSMEQNL-AEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQAT 127 +++ L A Q+ L L + F LA S + M +L AL ++Y++ PQA Sbjct: 63 EQLKERLPALLFQLDQLYLPPQANIQHCDRSFRLAFNSFISMDILPALCAELYEKAPQAG 122 Query: 128 IKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKD 187 I+ W L + GE + G L ++P + + L SD + + Sbjct: 123 IQTSLWQNAPLSEL--GETNFDLLG--------TLAVTVPENLYGKRLASDHYVICCCQT 172 Query: 188 HPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQ 247 + +++ + HI + +T +DN+ ++ ++R I +LP +L Sbjct: 173 NEIATHGMSMEHYFSARHILVSDLHEETRQVDNLFRQHKKQRRIFATLPSLRLALETVIG 232 Query: 248 PDNLL---LATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 L+ L A +Y + Y PL L PF+ + + LLWH + ++ + Sbjct: 233 THCLVTVPLHIAAQYAKRY------PLAVLSAPFELATHN-----YYLLWHAKFQNDDEH 281 Query: 305 VWLRE 309 W RE Sbjct: 282 RWFRE 286 >UniRef50_A1K8D7 Transcriptional regulator, LysR family n=1 Tax=Azoarcus sp. BH72 RepID=A1K8D7_AZOSB Length = 298 Score = 78.2 bits (191), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 85/331 (25%), Positives = 143/331 (43%), Gaps = 58/331 (17%) Query: 4 SITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLS 63 +I ++DLNLL + + ER+V++AA R+ +T +VS L +LR F DPLFV + G+ Sbjct: 2 NIQSVDLNLLKIFEAVYLERNVSRAAVRLELTQPSVSHGLTRLRLLFGDPLFVRTRSGVE 61 Query: 64 PTPLMVSMEQNLAEWMQMSNLLLDKPHHQTP--RGLKFELAAESPLMMIMLNALSKQIYQ 121 PT + + + + +++ LD+ H P G F L +I L L + + + Sbjct: 62 PTVVADRIAGPVQQALRVLQTTLDEHAHFEPASSGRTFRLHMSDFGEVIFLPKLMRALLE 121 Query: 122 RYPQATIKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDY-EVLFSDV 179 R P I+ R L A+ G++D LAI Y VL Sbjct: 122 RAPGVRIETRQLGGVELAAALDSGQID--------------------LAIGYLPVLDQGF 161 Query: 180 PCVWLRKDHPALHQTWNL--------DTFLRYPHISICWEQSDTWALDNVLQELGRERTI 231 C L D A+ +L + F I++ T A +L+E G + Sbjct: 162 ECRHLLADEYAVIAPRHLIPSGGKGDNAFNGLDFIAVT-SHPQTLA---ILRECGLLDRV 217 Query: 232 AMSLPEF-------EQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQK 284 + +P F + F A P ++ A +PR +++ PL AL Q+ Sbjct: 218 KLWVPHFMVVPAILAERNFAAVAPREVVHAFSPR-----SRVRSFPLPAL--------QR 264 Query: 285 KLEVPFTLLWHKRNSHNPKIVWLRETIKNLY 315 ++V L W++R + +P W+RE + +L+ Sbjct: 265 GMDV--NLYWNRRYTGDPGHAWMRELVADLF 293 >UniRef50_Q081K6 Transcriptional regulator, LysR family n=2 Tax=Alteromonadales RepID=Q081K6_SHEFN Length = 326 Score = 78.2 bits (191), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 81/318 (25%), Positives = 134/318 (42%), Gaps = 28/318 (8%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 K+I LDLNLL + L E+++T A+K + +TPSAVS ++ +LR +DPLFV L + Sbjct: 23 KAIQQLDLNLLKIFEALYSEQNMTLASKSLFITPSAVSHAIKRLRLVLNDPLFVRQGLQM 82 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGLK--FELAAESPLMMIMLNALSKQIY 120 PT M L + +L + P + F++A L ++ L KQ+ Sbjct: 83 QPTAACQRMAPQLISALNRIRQVLQQCGEFDPLTTEQTFKIAIHEALESQIMPTLIKQVV 142 Query: 121 QRYPQATIKLRNWDYDSLD-AITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 + P A I + +++ + GEVD+ + + PLA ++ L SD Sbjct: 143 KLIPHAKIASMSLSRENIARQLANGEVDLAIDVARA--------VNAPLA--HKTLLSDP 192 Query: 180 PCVWLRKDHPALH----QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSL 235 CV + + A+H + H+++ D +LQ+ G R I Sbjct: 193 FCVLIDRRQHAMHLEPSTKLTPTDYANAEHVAVSSRPIGRVMEDILLQQQGVNRHIKYRC 252 Query: 236 PEFEQSL-FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLW 294 ++ + + P L+ T PR Q L +PF+ ++ L W Sbjct: 253 QSYQTAAKIVIGSP---LMLTLPR--SIAEQFIHPDLHVCTMPFELP-----DIDTHLYW 302 Query: 295 HKRNSHNPKIVWLRETIK 312 H +P VWLR I+ Sbjct: 303 HMNTETDPAFVWLRAQIE 320 >UniRef50_Q15XJ4 Transcriptional regulator, LysR family n=1 Tax=Pseudoalteromonas atlantica T6c RepID=Q15XJ4_PSEA6 Length = 299 Score = 77.8 bits (190), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 71/322 (22%), Positives = 154/322 (47%), Gaps = 39/322 (12%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 LDLNLL+ L L+ ER+VT+A +RI+++ S +S ++++LR +FDD LFV L PT L Sbjct: 6 LDLNLLVALDALIAERNVTRAGERIHLSQSGMSSAVSRLRQYFDDELFVQVGRELIPTSL 65 Query: 68 MVSMEQNLAEWM-QMSNLLLDKPHHQTPRGLK-FELAAESPLMMIMLNALSKQIYQRYPQ 125 ++ + + + +M N ++ +P + + +AA M+++ + ++ Q P Sbjct: 66 TETLAKPVRRILVEMENTIISRPKFDPASDERCYRIAASELTTMVLMPTVISRLAQDAP- 124 Query: 126 ATIKLRNWDYDSLDAITRGEVDIGFS----GRESHPRSRELLSSLPLAIDYEVLFSDVPC 181 I+L D + +G++D+ ++ HP E+ C Sbjct: 125 -NIRLNLSTIGETDLLDKGDIDLMIIPKQFTQDGHPFD-------------EIYQEGYKC 170 Query: 182 V-WLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDN-VLQELGRERTIAMSLPEFE 239 + W +++ ++ + + + H+ + + +++ A D+ + G R + E Sbjct: 171 ICW--QENTSIGEKITFEDYQSAGHVVVSYGKNNAPAFDSWFMSHYGISRRV-----EIM 223 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVP---FTLLWHK 296 S +A P +L++ T R +++L Q+ +LP+ Q +E+P ++ +H+ Sbjct: 224 TSNLLA--PPSLIIGTQ-RIATVHSRLAQIVSQSLPI---RVLQPPIEIPPLTQSMQYHR 277 Query: 297 RNSHNPKIVWLRETIKNLYASM 318 ++ + WLR+ I ++ ++ Sbjct: 278 NRENDVGLSWLRQLIIDVAKTI 299 >UniRef50_B5XYZ1 Transcriptional regulator, LysR family n=5 Tax=Klebsiella RepID=B5XYZ1_KLEP3 Length = 308 Score = 77.8 bits (190), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 77/311 (24%), Positives = 135/311 (43%), Gaps = 23/311 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 LD L L + +V+ AA +N++ S L KLR F DPLFV + PTP Sbjct: 5 LDFKSLRFFSALYRLGNVSPAADALNISQPTGSLLLKKLRDHFADPLFVRVGQRMMPTPR 64 Query: 68 MVSMEQNLAEWMQMS-NLLLDKPH---HQTPRGLKFELAAESPLMMIMLNALSKQIYQRY 123 ++ + +Q++ N L KP Q+ R + S + ++ L ++ Q Q Sbjct: 65 ADAIAPTVFTLLQLADNDLAVKPEFLPQQSQRNFTIGMTDISQMTLLPLLQIALQ-QQAA 123 Query: 124 PQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVW 183 T ++N D +L+A+ G+ D+ L+ LP ++ + LF Sbjct: 124 DGITFTIQNLDEQTLNALESGKCDLAIG----------YLTQLPDSVYQQHLFDQSYVCL 173 Query: 184 LRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 ++HP + + + + H++I E + +D L E R IA++LP F + Sbjct: 174 AAENHPRIRTQLRAEDWRQEKHLAIRVEGTAHGDMDKRLDEHSMPRRIALTLPSFLGTGE 233 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 + A+ D ++A P + + P + PLPF ++ + +WH+R +P Sbjct: 234 LVAESD--MIAVVPEQVARHIT-RRYPCRSWPLPFPLAR-----IAIRQVWHQRLHRDPG 285 Query: 304 IVWLRETIKNL 314 +WLR I L Sbjct: 286 HIWLRSLIAAL 296 >UniRef50_Q2BLC9 LysR family regulatory protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BLC9_9GAMM Length = 303 Score = 77.8 bits (190), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 81/323 (25%), Positives = 139/323 (43%), Gaps = 41/323 (12%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 ++ +DL LL+ LM+ERSVT+AA R++ + A+S++L +LR F D LF GLSP Sbjct: 6 LSKVDLRLLVAFNALMEERSVTRAADRLDSSQPAMSRNLRQLRDLFGDELFSRQSHGLSP 65 Query: 65 TPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGLK--FELAAESPLMMIMLNALSKQIYQR 122 +P + + L L P P L+ F ++ P+ ++ L + + + Sbjct: 66 SP-RAEQLHQQLQPLLDDILRLVSPVQLDPAKLERTFNISMIDPISQGLITPLLEYLAEH 124 Query: 123 YPQATIKLRNWDYDSLDAITRGEVD--IGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 P + +RN + S+D + G++D I F G E+ P I ++ +++P Sbjct: 125 APGVKLIVRNLESYSMDDLIAGQLDFIINF-GNEA-----------PANIHSRLIANELP 172 Query: 181 CVWLRKDHP-ALHQTWNLDTFLRYPHISICWEQSDTWALDN-------VLQELGRERTIA 232 L HP A + T+ R H+ L + + E T Sbjct: 173 VCMLSHTHPMADLPEMDQATYRRQRHVDFIVHGFSGHELPDWLFTDREIFLETNNMVTAL 232 Query: 233 MSLPEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTL 292 ++ + E + + L+ +PR ++L ++P + S Q EVP L Sbjct: 233 NAICDSEMVMIGGS----LISQRSPR----SDELTRIPFI--------SDQPIPEVPIRL 276 Query: 293 LWHKRNSHNPKIVWLRETIKNLY 315 LWH R + W+RE I N + Sbjct: 277 LWHSRYHDDAAHRWMREVIDNAF 299 >UniRef50_Q1N663 Regulatory protein, LysR:LysR, substrate-binding n=1 Tax=Bermanella marisrubri RepID=Q1N663_9GAMM Length = 306 Score = 77.8 bits (190), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 81/316 (25%), Positives = 139/316 (43%), Gaps = 32/316 (10%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +DLNL + + E S+T+AA+R+N+T A+S +L++LR DDPLFV + PTPL Sbjct: 3 IDLNLFTVFEAIYLEGSLTRAAERLNLTQPAISHALSRLRERLDDPLFVRQGHKMRPTPL 62 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRGLK--FELAAESPLMMIMLNALSKQIYQRYPQ 125 + ++ ++ N L + HH P + + +A + +L + K + P Sbjct: 63 AQKLIPDIQAALRQLNGALQQSHHFNPAEAEKTYRVAMRDVMEATLLPPVLKGLDNIAPN 122 Query: 126 ---ATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCV 182 A++ + D +S + GE+D F P S ++ L + V+++ Sbjct: 123 IQLASVHIERRDMES--KLASGELD--FVVDVLLPTSEQIYKKKLLNDELVVIYN----- 173 Query: 183 WLRKDHPALHQ---TWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFE 239 PAL Q + + +LR HI + S +D L G R +A+ + Sbjct: 174 ------PALSQLPEGFTEEEYLRAKHILVSTRASGPSLVDYALSAEGLNRNVALRCQHYY 227 Query: 240 QSLFMAAQPDNLLLATAP-RYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRN 298 + +A+ DN +L T P RY Q H L LPF S + L WH+ Sbjct: 228 AACQVAS--DNGMLLTMPSRYASILLQ-HFPTLQRSSLPFKTS-----SIDVYLYWHESL 279 Query: 299 SHNPKIVWLRETIKNL 314 + + W R+ ++ + Sbjct: 280 NEDGANAWFRDMLQQV 295 >UniRef50_Q2P1D7 Transcriptional regulator n=5 Tax=Xanthomonas RepID=Q2P1D7_XANOM Length = 326 Score = 77.4 bits (189), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 76/311 (24%), Positives = 138/311 (44%), Gaps = 24/311 (7%) Query: 9 DLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFV--NSPLGLSPTP 66 DL LL+ L L++ ++VT AA+R++++ A+S LA+LR F DPL + ++ G+ TP Sbjct: 7 DLPLLVSLDALLELKNVTHAAQRLHMSQPALSSQLARLRVLFKDPLLMPSDTGRGMVATP 66 Query: 67 LMVSMEQNLAEWM-QMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQI-YQRYP 124 + L E + ++S L D F +AA + + + L+ I Q Sbjct: 67 RADQLASPLREAIGKLSLLGKDSAFDPATSSASFRIAAAADAIGTLGAGLAGLIQAQGNR 126 Query: 125 QATIKLRNWDYDS-LDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVW 183 + ++ + D+ LDA GE+D+ + ++P A+ L + + Sbjct: 127 KMRLEFVHVSSDTRLDAFENGELDLLIDHAQ----------AVPDALRLRRLRDERYVLV 176 Query: 184 LRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 R+ HP + ++ R H+ + Q+ A+D L+ LG R IA+++ + + Sbjct: 177 QRRGHPRGTAALSAASYSRLAHVQVAHAQACNLAIDAQLRHLGHTRQIAVTVSQCATARD 236 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 + D ++AT P L LP P ++ + WH+RN + Sbjct: 237 IVLGTD--MVATMPATLAAERGHAPLDCFELPFPLP-------DMALAMAWHRRNDAHAA 287 Query: 304 IVWLRETIKNL 314 WLRE + +L Sbjct: 288 HRWLRERVLDL 298 >UniRef50_B5ZWA1 Transcriptional regulator, LysR family n=4 Tax=Rhizobium RepID=B5ZWA1_RHILW Length = 311 Score = 77.4 bits (189), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 76/319 (23%), Positives = 135/319 (42%), Gaps = 31/319 (9%) Query: 7 TLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTP 66 + DLNLL+ LM+ERSVTKAA R+ + A+S +L LR D LFV + PT Sbjct: 14 SFDLNLLVAFDALMKERSVTKAAVRLKIQQPAMSHNLGTLRTLLQDELFVRVGQVMQPTH 73 Query: 67 LMVSMEQNLAEWMQMSNLLLDKPHHQTPRGLK--FELAAESPLMMIMLNALSKQIYQRYP 124 + + + + + L + P P + F + S L ++++ L+ + + P Sbjct: 74 RALRFAEAVEHILSRTQLAIVTPATFEPGEAEQIFRIGFSSELEVLLVPRLAAMLNEMAP 133 Query: 125 QATIKLRNWDYDSLDAITRGEV-DIGFS----GRESHPRSRELLSSLPLAIDYEVLFSDV 179 + R + + + + V D+G G H RS LL L Y D+ Sbjct: 134 GIRVLARAVNPELVHKLLDDNVIDLGVGCYDDGNNRHRRS--LLFEQSLMCCYNPKLLDL 191 Query: 180 PCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFE 239 P +T + D ++ H + + + +D+ L+ + ++++ PEF Sbjct: 192 P------------ETLDRDAYIGLKHALVSQKDAIEGCIDDALKRINVRLDVSVAAPEFL 239 Query: 240 QSLFMAAQPDNLLLATAP-RYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRN 298 L A + L+AT P R + Y L L + +PL S P +++W Sbjct: 240 TVL--TAVLEAPLIATLPTRIVKRYAGLFGLAMAEVPLDLKVS-------PISMVWSAAG 290 Query: 299 SHNPKIVWLRETIKNLYAS 317 ++P W+R + L ++ Sbjct: 291 DNDPANRWMRSQVTQLVSA 309 >UniRef50_C5A8T0 Transcriptional regulator, LysR family protein n=2 Tax=Proteobacteria RepID=C5A8T0_BURGB Length = 313 Score = 77.4 bits (189), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 80/321 (24%), Positives = 126/321 (39%), Gaps = 26/321 (8%) Query: 4 SITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLS 63 +I +DLNLL ++L E ++AA R+++T SAVS +L +LRA + DPLFV + GL+ Sbjct: 5 NIADVDLNLLKVFEVLFDEGGASRAAIRLDLTQSAVSAALRRLRALYGDPLFVRTGRGLA 64 Query: 64 PTPLMVSMEQNLAEWMQMS--NLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQ 121 PT ++ + E + +L P + G +A + L + + Sbjct: 65 PTARARELKPLIGEALDRCRQSLAFGAPAPASFEGRAVSVAMSDDFEIAFGGRLIECAAR 124 Query: 122 RYPQATIKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 P + R + DA+ EVD+ + R L + L D Sbjct: 125 LAPGLRVIFRQTHSQIVGDALANREVDLAIAAGGFATRG---LGHMALGHGRYACLVDPA 181 Query: 181 CVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQ 240 R LD FL H+ + +D L E+GR RT+ S F Sbjct: 182 AAPGR-------LVLTLDDFLAREHV-LVSSGGVVGIVDEALAEIGRRRTVRASTTHFAA 233 Query: 241 SLF-MAAQPDNLLLATAPRY-CQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRN 298 F + P +AT P + + ++ L LVA PL P L W Sbjct: 234 LPFLLRGTP---AVATIPHHAAEALARMTGLGLVACPLAMP-------AYPVALGWRVST 283 Query: 299 SHNPKIVWLRETIKNLYASMA 319 + + LR+ I + +A A Sbjct: 284 LRDAAVAKLRQAIVDSFAGFA 304 >UniRef50_UPI0001BCC5DA LysR family transcriptional regulator n=1 Tax=Aeromicrobium marinum DSM 15272 RepID=UPI0001BCC5DA Length = 315 Score = 77.4 bits (189), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 77/304 (25%), Positives = 133/304 (43%), Gaps = 23/304 (7%) Query: 19 LMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSMEQNLAEW 78 LM E SVT+AA+R+++ A+S SLA+LR +FDDPL V L+PT + + + E Sbjct: 24 LMAESSVTRAAERMSIGQPAMSASLARLRKFFDDPLLVRQGRSLAPTNRALELVAPIREA 83 Query: 79 MQM--SNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQATIKLRNWDYD 136 + S + + T F + A ++++ L L + + P ++ D Sbjct: 84 LDGLESTIRAGREFDPTTSSRTFTVMASDYVLLMFLGPLLSDLRREAPHVRFEIFPVTRD 143 Query: 137 SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPALHQTWN 196 + ++ R ++D+ +P EL+ PL + +LF+D + +DHP + Sbjct: 144 AAPSVVRSQLDLLI-----YP--DELVEDEPL-VRSRMLFTDRLVCAVARDHPDVGDVMT 195 Query: 197 LDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEF-EQSLFMAAQPDNLLLAT 255 F P +S + T + D LQ++G ER +A+ F Q L + P ++A Sbjct: 196 EHQFRTLPSVSFSSSSTATIS-DMRLQQVGYERPLAIEAQSFVVQPLLL---PGTTMMAL 251 Query: 256 AP-RYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWLRETIKNL 314 P R +Y+ L L+ P+ ++ W R +P WLR + Sbjct: 252 LPERLARYFESRISLRLMEPPVELSPLREAA-------FWSARADADPAHRWLRRRMVEA 304 Query: 315 YASM 318 A M Sbjct: 305 AARM 308 >UniRef50_Q5LN55 Transcriptional regulator, LysR family n=4 Tax=Rhodobacterales RepID=Q5LN55_SILPO Length = 331 Score = 77.4 bits (189), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 87/332 (26%), Positives = 129/332 (38%), Gaps = 48/332 (14%) Query: 7 TLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTP 66 T DLNLL L L+ RS T+A +++ ++ AVS +L++LR DPLF+ L PT Sbjct: 5 TFDLNLLRVLDALLSTRSTTRAGQQLGMSQPAVSAALSRLRHALGDPLFIRQGRQLVPTD 64 Query: 67 LMVSMEQNLAEWMQMSNLLLDKPHHQTPRGL--KFELAAESPLMMIMLNALSKQIYQRYP 124 + L + + + LL P L+ +++ L++ + P Sbjct: 65 YAGGLHAPLRDLLGQTEALLAGQPDFDPGAATDSLTLSGSDFYAELLMPRLARHLSHVAP 124 Query: 125 QATIKLRNWDYDS-LDAITRGEVDIGFSGRESHP---RSRELLSSLPLAIDYEVLFSDVP 180 ++L + D+ + ++ + VD+ P R L SS LA+ Sbjct: 125 GMRVQLVDLVPDNYVQSVGQSAVDMAILPATPTPDWVEERRLHSSHFLAV---------- 174 Query: 181 CVWLRKDHP-------ALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAM 233 R DHP A LD F H E D L +GR R + M Sbjct: 175 ---ARADHPEIASAAIAPGAVLPLDLFCSLQHALFSPEGKLHGLGDAALARIGRARQVTM 231 Query: 234 SLPEF-------EQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKL 286 +LP F QS +A P L + APR L L P+P Sbjct: 232 TLPVFSGVLNAVSQSDLIALIPHQLAESVAPRLG--------LSLYHPPIPVG------- 276 Query: 287 EVPFTLLWHKRNSHNPKIVWLRETIKNLYASM 318 V ++WHKR S P WLR+ I L A + Sbjct: 277 PVEIMMVWHKRASTAPAHRWLRDQIAMLMAEL 308 >UniRef50_Q7MEK1 Transcriptional regulator n=15 Tax=Vibrionaceae RepID=Q7MEK1_VIBVY Length = 307 Score = 77.0 bits (188), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 83/327 (25%), Positives = 139/327 (42%), Gaps = 51/327 (15%) Query: 4 SITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLS 63 ++ DLNL+ + +E++++KAA R++++ AVSK+LA+LR +D+PLF SP G+ Sbjct: 6 AMKNTDLNLIPIFVAIFEEQNLSKAAARLDISQPAVSKALARLRDIYDEPLFHRSPSGVE 65 Query: 64 PT-------PLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALS 116 PT P M++ +N + S+ K ++ F +A S ++ L Sbjct: 66 PTSFAVDIYPAMLTAFKNFTSTLSASSEFEAKVSNRI-----FSIACVSVASYELMPQLL 120 Query: 117 KQIYQRYPQATIK---LRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYE 173 KQI Q P +++ L DY+S + R ++ I + PR L P Sbjct: 121 KQIRQHAPNISLEVHPLFTEDYESDLRLQRYDLIIDMA-----PRGWTTLKVEP------ 169 Query: 174 VLFSDVPCVWLRKDHPALHQTWNLDTFLRYPHISIC-WEQSDTWALDNVLQELGRERTIA 232 +FS+ V DHP + ++ FL H+ + W + + +L + R IA Sbjct: 170 -IFSERLMVVCCADHPRIADACSVAQFLAEEHVVVSRWHARKSLMSAEDIADLAK-RKIA 227 Query: 233 MS-------LPEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKK 285 LP S ++ P++ + A A Y + A+ LPFD Sbjct: 228 YRASGALEMLPVIHGSEYIGMLPESTINAFAGTY----------NIKAVSLPFDHDVYD- 276 Query: 286 LEVPFTLLWHKRNSHNPKIVWLRETIK 312 +WH S WLR +K Sbjct: 277 ----LCAIWHPSRSSESAHQWLRNQLK 299 >UniRef50_A1UXD8 Transcriptional regulator, LysR family n=41 Tax=cellular organisms RepID=A1UXD8_BURMS Length = 355 Score = 77.0 bits (188), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 75/302 (24%), Positives = 134/302 (44%), Gaps = 34/302 (11%) Query: 19 LMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSMEQNLAEW 78 LMQE+++++AA R++++ AVS +L +LR +PLF + G++PT ++ + + + Sbjct: 63 LMQEQNLSRAAIRLHMSQPAVSNALTRLRQQLGEPLFTRTARGMTPTAQARTLYEPVRQA 122 Query: 79 MQMSNLLLD-------KPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQATIKLR 131 + + + L HH F+L+ ++L L I R P + ++ Sbjct: 123 LYLLQIGLGPQADFEPDTHH------LFKLSMNDYGQTVLLPDLLAHIKSRAPNVMLSVQ 176 Query: 132 NWDYDSLDA-ITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPA 190 + D S+ A +T G +D+ H + EL YE L + V R HPA Sbjct: 177 SDDAGSIPAQLTTGTLDLAID--YLHFDNPELC--------YEPLHEEHLVVIGRAGHPA 226 Query: 191 LHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQPDN 250 L + H+SI L+ VL R + + +P + + A+ D Sbjct: 227 FAGGLALRGYEESGHVSIQPRDRRGSPLEIVLGSARVRRVVHLQVPHYLTIPALVAKSD- 285 Query: 251 LLLATAP-RYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWLRE 309 LL T P R + + ++ L + PLP D + + +L+WH++ P + WLRE Sbjct: 286 -LLGTIPRRLAERFADVYALQIA--PLPIDIA-----PIQVSLIWHRQQDAQPGLRWLRE 337 Query: 310 TI 311 + Sbjct: 338 QV 339 >UniRef50_A6V5Q0 MexT protein n=1 Tax=Pseudomonas aeruginosa PA7 RepID=A6V5Q0_PSEA7 Length = 308 Score = 77.0 bits (188), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 75/287 (26%), Positives = 128/287 (44%), Gaps = 32/287 (11%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 ++I +DLNLLL LM ERS T+AA ++VT AVS +L +LR F D LF+ S G+ Sbjct: 7 RNIARIDLNLLLTFHCLMSERSATRAAVVLHVTQGAVSAALRRLREHFGDELFIRSASGM 66 Query: 63 SPTPLMVSMEQNLAEWM-QMSNLLLDKPH---HQTPRGLKFELA--AESPLMMIMLNALS 116 PT + + +AE + +S +L +P H + L+ ES L ++NA + Sbjct: 67 QPTRKAMELAPRIAEALTSISGVLAAEPEFSPHDSSYVFNIALSDDIESYLAPCIVNAAA 126 Query: 117 KQ---IYQRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYE 173 + + + Q+ L W LD ++D+ S P+ + + Sbjct: 127 AEGLGVSFAFHQSNSSL--WKQSLLDP----DMDLVIC---SEPK------DFNTSYSSQ 171 Query: 174 VLFSDVPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAM 233 VLFS R LD + H+ I ++ + +D++ + G R + Sbjct: 172 VLFSSSYSCLFRPRGSMAGAAIGLDDYFAANHVRISYDGRRGF-IDDLFESAGYARRVTA 230 Query: 234 SLPEFEQSL--FMAAQPDNLLLATAPRY-CQYYNQLHQLPLVALPLP 277 S F +L M+ + ++AT P + + Y+++ L +PLP Sbjct: 231 SFTHFAGALSTLMSGE----VIATLPTFAAETYSRMMDLHCCPVPLP 273 >UniRef50_B2JTT0 Transcriptional regulator, LysR family n=3 Tax=Burkholderiaceae RepID=B2JTT0_BURP8 Length = 324 Score = 76.6 bits (187), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 79/334 (23%), Positives = 134/334 (40%), Gaps = 41/334 (12%) Query: 4 SITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLS 63 S +DLNLL + ++R++ A KR++++ SA+S +LA++R D LFV + G+ Sbjct: 2 SADRIDLNLLRVFDAIFEDRNLGLAGKRLHLSQSAISHALARMREVLGDDLFVRTGKGME 61 Query: 64 PTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPR--GLKFELAAESPLMMIMLNALSKQIYQ 121 PT + M + +Q L PR KF +AA + ++L LS++++ Sbjct: 62 PTMRALRMAAQVRGALQQIRAALGVDEFD-PRVAQRKFVVAANDYITSLLLGRLSQRLHA 120 Query: 122 RYPQATIKLR-NWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 P + +R + D I G +D+ + + +P + L+ Sbjct: 121 EAPLVDLVVRPSTRLDLAGQIDVGRIDMAIG----------IFADVPTRLRGTTLWEQTD 170 Query: 181 CVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQ 240 V L +DHP + D L +P I+I + A+ + E G R M F + Sbjct: 171 VVLLHRDHPIAGRAVTRDDMLAHPLIAISQGGEEEGAVGGFIVERGLARQSEM----FNR 226 Query: 241 SLFMAAQPDNLLLATAPRYCQYYNQLHQLP--------LVALPLPFDESQQKKLE----- 287 A D A PR LP L +P Q+ E Sbjct: 227 DALNRAFDDP---AETPRMRMSVAHSLALPALLRHSDMLALVPSSLGRELQRYGELKMCA 283 Query: 288 -------VPFTLLWHKRNSHNPKIVWLRETIKNL 314 V +WH+RN +P + WLR+ + ++ Sbjct: 284 TPYACPDVAVRAVWHERNDADPALQWLRQQLADV 317 >UniRef50_B9K0N9 Transcriptional regulator LysR family n=1 Tax=Agrobacterium vitis S4 RepID=B9K0N9_AGRVS Length = 333 Score = 76.6 bits (187), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 93/333 (27%), Positives = 148/333 (44%), Gaps = 42/333 (12%) Query: 2 KKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLG 61 +++ LD+ L+ L+LL+ E SV++ A + VS SL +LR F DPL V S Sbjct: 3 EQAYANLDIRLMRTLRLLLTECSVSRTADLLGQAQPTVSLSLKRLRDIFQDPLLVRSGSA 62 Query: 62 LSPTPLMVSMEQNLAEWMQMSNLL--LDKPHHQTPRGLK-------FELAAESPLMMIML 112 L PT E+ LA M+++L +D H +P F + A + L + + Sbjct: 63 LVPT------ERGLALRSAMNDILGRIDT-HLISPTAFDPAVSVRHFRIVASNCLGTVFM 115 Query: 113 NALSKQIYQRYPQATIK---LRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLA 169 L I P +I + + D D L ++ G +D G HP E L P+ Sbjct: 116 PQLIGAITDMAPGISIDASPMPSQD-DLLSGLSEGRID-AVIGNWPHP--PEHLRIAPM- 170 Query: 170 IDYEVLFSDVPCVWLRKDHPALHQTWN---LDTFLRYPHISICWEQSDTWA-LDNVLQEL 225 L +D+ C+ +R H + + LD +L H+S E+ ++ +D L++L Sbjct: 171 -----LKTDIVCM-VRSTHRFARRGRDRIRLDEYLEESHLSPTSERDAQFSPIDGRLRDL 224 Query: 226 GRERTIAMSLPEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKK 285 G +R I ++PE+ + ++ A+ D L+ T + + Q P L P + Q Sbjct: 225 GVKRHIRATVPEYSIAPYVLARSD-LVFTTGRHFAEQVAQ--TFPFAVLDAPVELGQMH- 280 Query: 286 LEVPFTLLWHKRNSHNPKIVWLRETIKNLYASM 318 F LWH R H P WLR IK+ A M Sbjct: 281 ----FYTLWHDRKHHAPDQAWLRRMIKHASAEM 309 >UniRef50_Q9FD34 PnbR n=2 Tax=Pseudomonas RepID=Q9FD34_PSEPU Length = 348 Score = 76.6 bits (187), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 85/338 (25%), Positives = 135/338 (39%), Gaps = 57/338 (16%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 LDLNL+ +M+ERSV +A++R++++ SAVS +L++LR +FV + G+SPT Sbjct: 26 LDLNLIRVFDAVMEERSVLRASQRLHLSQSAVSHALSRLREGLGQEIFVRTGKGMSPTSY 85 Query: 68 MVSMEQNL-AEWMQMSNLLLDKPHHQTPRGL--KFELAAESPLMMIMLNALSKQIYQRYP 124 + + L A + MS L +P+ + F +AA + +L L+ Q+ + P Sbjct: 86 ALEISGALHAALLSMSKALSQAATPFSPQSVCRSFVIAANDYVSATLLPQLNHQLSKVAP 145 Query: 125 QATIKLR-NWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVW 183 +++ D + I G +D+ S P E + P+ EV Sbjct: 146 GIDLQITPATRLDLAEQIDLGRIDVAIGTFRSVP---ERFRTKPVLFQDEVFICS----- 197 Query: 184 LRKDHPALHQTWNLDTFLRYP--HISICWEQS-------------------DTWALDNVL 222 HP L +RYP +S+ E D AL+ L Sbjct: 198 --GTHPISANKPQLQDLVRYPLAVVSLGGEGEGMLSGYILERGLARQAQMYDRTALEQAL 255 Query: 223 QELGRERTIAMSLPEF-------EQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALP 275 E G + LP F E S +A P L A L P Sbjct: 256 NEAGLSMRRQIVLPHFLALPMLLEGSELLAIVPQPLARTFA----------RTLGFKIKP 305 Query: 276 LPFDESQQKKLEVPFTLLWHKRNSHNPKIVWLRETIKN 313 LP+ ++Q+ L+WH N ++P +WL E I Sbjct: 306 LPYPAARQQ-----LDLIWHSSNDNDPAQLWLHEQISE 338 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_A7ZTR6 HTH-type transcriptional regulator yidZ n=122 Ta... 409 e-113 UniRef50_A0KKG7 HTH-type transcriptional regulator YidZ n=3 Tax=... 308 2e-82 UniRef50_C2LG43 LysR-family transcriptional regulator n=4 Tax=En... 300 5e-80 UniRef50_A9G5G2 Nodulation protein D n=2 Tax=Proteobacteria RepI... 282 1e-74 UniRef50_A3QJ07 Transcriptional regulator, LysR family n=25 Tax=... 279 1e-73 UniRef50_C3KKF8 Putative transcriptional regulatory protein, Lys... 279 1e-73 UniRef50_A6T413 Transcriptional regulator, LysR family n=1 Tax=J... 277 3e-73 UniRef50_B9Z480 Transcriptional regulator, LysR family n=1 Tax=L... 277 4e-73 UniRef50_A5F4D9 Transcriptional regulator, LysR family n=68 Tax=... 275 2e-72 UniRef50_Q2S713 Transcriptional regulator n=1 Tax=Hahella chejue... 270 3e-71 UniRef50_Q5P743 Transcriptional regulator, LysR family n=2 Tax=B... 269 1e-70 UniRef50_A6VUW1 Transcriptional regulator, LysR family n=2 Tax=M... 269 1e-70 UniRef50_A4SSQ1 Transcriptional regulator, LysR family n=2 Tax=A... 267 5e-70 UniRef50_Q12H69 Transcriptional regulator, LysR family n=14 Tax=... 266 8e-70 UniRef50_C6ARG9 Transcriptional regulator, LysR family n=7 Tax=P... 265 2e-69 UniRef50_B1KAV0 Transcriptional regulator, LysR family n=5 Tax=B... 265 2e-69 UniRef50_P10183 HTH-type transcriptional activator nahR n=67 Tax... 264 3e-69 UniRef50_Q3KA14 LysR family regulatory protein n=24 Tax=Bacteria... 264 4e-69 UniRef50_B0C5B7 Transcriptional regulator, LysR-family n=1 Tax=A... 264 4e-69 UniRef50_A1W256 Transcriptional regulator, LysR family n=2 Tax=C... 263 5e-69 UniRef50_C6XIT5 Transcriptional regulator, LysR family n=1 Tax=H... 263 6e-69 UniRef50_A9GLW1 Transcriptional regulator, LysR family n=1 Tax=S... 263 7e-69 UniRef50_Q473Q1 Transcriptional regulator, LysR family n=9 Tax=B... 262 8e-69 UniRef50_A0LD88 Transcriptional regulator, LysR family n=1 Tax=M... 262 9e-69 UniRef50_Q2S7V2 Transcriptional regulator n=1 Tax=Hahella chejue... 262 1e-68 UniRef50_A9FW21 Transcriptional regulator, LysR family n=2 Tax=M... 262 2e-68 UniRef50_Q30XG7 Conserved hypothetical transcriptional regulator... 260 5e-68 UniRef50_Q12M05 Transcriptional regulator n=3 Tax=Gammaproteobac... 260 5e-68 UniRef50_Q15UP0 Transcriptional regulator, LysR family n=4 Tax=A... 259 1e-67 UniRef50_A0LD87 Transcriptional regulator, LysR family n=1 Tax=M... 259 1e-67 UniRef50_B4X4B4 LysR substrate binding domain protein n=1 Tax=Al... 258 2e-67 UniRef50_B6R1K2 Transcriptional regulator, LysR family n=1 Tax=P... 258 2e-67 UniRef50_A1WRT3 Transcriptional regulator, LysR family n=1 Tax=V... 257 3e-67 UniRef50_A8GKS5 Transcriptional regulator, LysR family n=1 Tax=S... 257 4e-67 UniRef50_Q0BPL7 Transcriptional regulators, LysR family n=1 Tax=... 257 5e-67 UniRef50_A5V8P8 Transcriptional regulator, LysR family n=1 Tax=S... 257 5e-67 UniRef50_C9NXV6 Transcriptional regulator LysR family n=1 Tax=Vi... 255 1e-66 UniRef50_Q210Z5 Transcriptional regulator, LysR family n=2 Tax=A... 255 2e-66 UniRef50_D0LKM3 Transcriptional regulator, LysR family n=1 Tax=H... 255 2e-66 UniRef50_B7WQP0 Transcriptional regulator, LysR family n=1 Tax=C... 255 2e-66 UniRef50_B7VQ45 Transcriptional regulator n=8 Tax=Vibrionales Re... 255 2e-66 UniRef50_Q7W2A6 Transcriptional regulator n=3 Tax=Bordetella Rep... 254 3e-66 UniRef50_A1U1I0 Transcriptional regulator, LysR family n=67 Tax=... 254 4e-66 UniRef50_A4YPA1 Putative transcriptional regulator, LysR family ... 254 4e-66 UniRef50_A6EYC4 LysR family regulatory protein n=1 Tax=Marinobac... 254 4e-66 UniRef50_Q1GMN1 Transcriptional regulator, LysR family n=1 Tax=R... 254 4e-66 UniRef50_Q8YZV2 Transcriptional regulator n=2 Tax=Nostocaceae Re... 253 5e-66 UniRef50_A6VSJ2 Transcriptional regulator, LysR family n=28 Tax=... 253 6e-66 UniRef50_A9FB16 Transcriptional regulator, LysR family n=3 Tax=S... 253 8e-66 UniRef50_Q89IY7 Transcriptional regulatory protein n=1 Tax=Brady... 252 9e-66 UniRef50_C4UEX0 Lys-R type regulatory protein n=1 Tax=Yersinia r... 252 1e-65 UniRef50_Q13YH7 Transcriptional regulator, LysR family n=12 Tax=... 252 1e-65 UniRef50_Q2IYM8 Transcriptional regulator, LysR family n=2 Tax=R... 252 1e-65 UniRef50_B0C7Y6 Transcriptional regulator, LysR family n=1 Tax=A... 252 1e-65 UniRef50_B2JSH4 Transcriptional regulator, LysR family n=2 Tax=B... 252 2e-65 UniRef50_A8V9B9 LysR-like regulatory protein n=2 Tax=Betaproteob... 251 2e-65 UniRef50_B0BQD1 HTH-type transcriptional activator n=15 Tax=Prot... 251 2e-65 UniRef50_B9Z7Z3 Transcriptional regulator, LysR family n=3 Tax=P... 250 3e-65 UniRef50_D1RUJ7 Transcriptional regulatory protein n=1 Tax=Serra... 250 4e-65 UniRef50_A9AQZ4 Transcriptional regulator, LysR family n=24 Tax=... 250 5e-65 UniRef50_A6FYP7 Transcriptional regulator, LysR family protein n... 250 5e-65 UniRef50_Q08NF6 Transcriptional Regulator, LysR family n=1 Tax=S... 250 6e-65 UniRef50_B7CP85 Transcriptional regulator, LysR family protein n... 249 8e-65 UniRef50_Q4KHX1 Transcriptional regulator, LysR family n=1 Tax=P... 249 1e-64 UniRef50_C5CVL6 Transcriptional regulator, LysR family n=5 Tax=c... 249 1e-64 UniRef50_Q1XGL2 Transcriptional activator NahR n=3 Tax=root RepI... 249 1e-64 UniRef50_B6JAE3 MexT protein n=1 Tax=Oligotropha carboxidovorans... 249 1e-64 UniRef50_Q393U0 Transcriptional regulator, LysR family n=6 Tax=B... 249 1e-64 UniRef50_C7RKX8 Transcriptional regulator, LysR family n=20 Tax=... 249 1e-64 UniRef50_A3Y808 Transcriptional regulator, LysR family protien n... 248 2e-64 UniRef50_Q3JR86 LysR-family regultor n=70 Tax=Proteobacteria Rep... 248 2e-64 UniRef50_A9AQX4 Transcriptional regulator, LysR family n=20 Tax=... 248 2e-64 UniRef50_Q13GK2 Transcriptional regulator, LysR family n=1 Tax=B... 248 3e-64 UniRef50_A9CLK9 Transcriptional regulator, LysR family n=2 Tax=A... 247 3e-64 UniRef50_Q46YJ7 Transcriptional regulator, LysR family n=5 Tax=c... 247 3e-64 UniRef50_C9PC13 Transcriptional regulator LysR family n=1 Tax=Vi... 247 3e-64 UniRef50_B1J7P4 Transcriptional regulator, LysR family n=5 Tax=P... 247 5e-64 UniRef50_A1U8Q8 Transcriptional regulator, LysR family n=1 Tax=M... 247 5e-64 UniRef50_Q13QG3 Transcriptional regulator, LysR family n=9 Tax=P... 246 7e-64 UniRef50_A9C385 Transcriptional regulator, LysR family n=2 Tax=c... 246 7e-64 UniRef50_A4XX96 Transcriptional regulator, LysR family n=3 Tax=P... 245 1e-63 UniRef50_Q46T42 Regulatory protein, LysR:LysR, substrate-binding... 245 1e-63 UniRef50_C5AL93 Transcriptional regulator, LysR family protein n... 245 1e-63 UniRef50_A3YHF6 Transcriptional regulatory protein n=2 Tax=Gamma... 245 2e-63 UniRef50_Q1MWN1 LysR-type regulatory protein n=1 Tax=Sphingomona... 245 2e-63 UniRef50_B9B1S8 Transcriptional regulator, LysR family n=1 Tax=B... 244 3e-63 UniRef50_A5WDE8 Transcriptional regulator, LysR family n=1 Tax=P... 244 5e-63 UniRef50_D1TCI7 LysR family transcriptional regulator n=2 Tax=Bu... 244 5e-63 UniRef50_B6RAE8 Transcriptional Regulator, LysR family n=1 Tax=P... 243 5e-63 UniRef50_Q2BJ61 Transcriptional regulator, LysR family protein n... 243 5e-63 UniRef50_Q391Q9 Transcriptional regulator, LysR family n=1 Tax=B... 243 7e-63 UniRef50_A6EW06 Transcriptional regulator n=2 Tax=Marinobacter R... 243 8e-63 UniRef50_Q39AY8 Transcriptional regulator, LysR family n=1 Tax=B... 242 9e-63 UniRef50_B7VQV6 Transcriptional regulator n=10 Tax=Vibrionales R... 242 1e-62 UniRef50_Q2G901 Transcriptional regulator, LysR family n=2 Tax=A... 242 1e-62 UniRef50_Q88I06 Nodulation protein d1 n=4 Tax=Gammaproteobacteri... 242 1e-62 UniRef50_A8GZD3 Transcriptional regulator, LysR family n=22 Tax=... 242 2e-62 UniRef50_Q7NT25 Probable transcription regulator protein n=1 Tax... 242 2e-62 UniRef50_A1WMY5 Transcriptional regulator, LysR family n=1 Tax=V... 242 2e-62 UniRef50_Q0VLU8 Transcriptional regulator, LysR family n=2 Tax=A... 241 2e-62 UniRef50_A9GGP1 LysR-family transcriptional regulator n=1 Tax=So... 241 2e-62 UniRef50_D2B6V0 LysR family transcriptional regulator n=5 Tax=Ac... 241 2e-62 UniRef50_Q13JD9 Transcriptional regulator, LysR family n=1 Tax=B... 241 2e-62 UniRef50_B5XYZ1 Transcriptional regulator, LysR family n=5 Tax=K... 241 2e-62 UniRef50_A8GG55 Transcriptional regulator, LysR family n=1 Tax=S... 241 2e-62 UniRef50_A1VMI6 Transcriptional regulator, LysR family n=28 Tax=... 241 2e-62 UniRef50_Q7MCZ8 Transcriptional regulator n=13 Tax=Vibrionaceae ... 241 3e-62 UniRef50_A1UYR8 Transcriptional regulator, LysR family n=32 Tax=... 240 4e-62 UniRef50_A6FY23 Transcriptional regulator, LysR family protein n... 240 4e-62 UniRef50_B7V4S2 Probable transcriptional regulator n=7 Tax=Pseud... 240 5e-62 UniRef50_Q0ARX0 Transcriptional regulator, LysR family n=1 Tax=M... 240 7e-62 UniRef50_A0KH33 Transcriptional regulator, LysR family n=2 Tax=A... 240 7e-62 UniRef50_Q5LKP3 Transcriptional regulator, LysR family n=1 Tax=R... 239 7e-62 UniRef50_Q1N663 Regulatory protein, LysR:LysR, substrate-binding... 239 7e-62 UniRef50_B8KV86 Putative transcriptional regulator, LysR family ... 239 8e-62 UniRef50_C6BS61 Transcriptional regulator, LysR family n=1 Tax=D... 239 9e-62 UniRef50_D0RY94 Transcriptional regulator n=4 Tax=Acinetobacter ... 239 9e-62 UniRef50_B4ELV6 LysR family regulatory protein n=1 Tax=Burkholde... 239 2e-61 UniRef50_C5CZY6 Transcriptional regulator, LysR family n=1 Tax=V... 238 2e-61 UniRef50_Q687Z9 LysR-type activator n=1 Tax=Sphingopyxis macrogo... 238 2e-61 UniRef50_A6GJJ5 Regulatory protein, LysR:LysR, substrate-binding... 238 2e-61 UniRef50_B7RV99 Transcriptional regulator, LysR family protein n... 238 3e-61 UniRef50_A5W6Q9 Transcriptional regulator, LysR family n=12 Tax=... 237 3e-61 UniRef50_B7RYN1 Transcriptional regulator, LysR family protein n... 237 3e-61 UniRef50_D0LUZ7 Transcriptional regulator, LysR family n=1 Tax=H... 237 4e-61 UniRef50_A4GJC2 Transcriptional regulator LysR family protein n=... 237 4e-61 UniRef50_Q5LN55 Transcriptional regulator, LysR family n=4 Tax=R... 237 5e-61 UniRef50_A1U2R6 Transcriptional regulator, LysR family n=3 Tax=M... 237 6e-61 UniRef50_A6CYZ8 Hypothetical transcriptional regulator, LysR fam... 237 6e-61 UniRef50_B2JFW9 Transcriptional regulator, LysR family n=39 Tax=... 236 7e-61 UniRef50_Q8XRG7 Probable transcriptional regulator transcription... 236 8e-61 UniRef50_A2SDX3 Transcriptional regulator, LysR family n=6 Tax=B... 236 1e-60 UniRef50_D1P5Q9 Transcriptional regulator, LysR family n=1 Tax=P... 235 1e-60 UniRef50_Q7MFJ9 Transcriptional regulator n=28 Tax=Vibrio RepID=... 235 1e-60 UniRef50_A9FJR3 Transcriptional regulator, LysR family n=2 Tax=S... 235 1e-60 UniRef50_Q2KYC5 LysR-family transcriptional regulator n=9 Tax=Bu... 235 1e-60 UniRef50_B8ERS8 Transcriptional regulator, LysR family n=1 Tax=M... 235 1e-60 UniRef50_C6DDI5 Transcriptional regulator, LysR family n=4 Tax=E... 235 2e-60 UniRef50_D0FZR1 LysR-type transcriptional regulator n=2 Tax=Rhod... 235 2e-60 UniRef50_C0ZNV8 Putative LysR family transcriptional regulator n... 234 2e-60 UniRef50_A6X639 Transcriptional regulator, LysR family n=1 Tax=O... 234 2e-60 UniRef50_D1P3H6 Transcriptional regulator, LysR family n=1 Tax=P... 234 2e-60 UniRef50_A3VWI6 Transcriptional regulatory protein n=1 Tax=Roseo... 234 3e-60 UniRef50_D2C014 Transcriptional regulator, LysR family n=1 Tax=D... 233 5e-60 UniRef50_A1UXD8 Transcriptional regulator, LysR family n=41 Tax=... 233 6e-60 UniRef50_Q1M9F6 Putative LysR-family transcriptional regulator n... 233 6e-60 UniRef50_B1K4K0 Transcriptional regulator, LysR family n=3 Tax=B... 232 1e-59 UniRef50_B4RWU1 Transcriptional regulator n=2 Tax=Alteromonas ma... 232 1e-59 UniRef50_Q2SHJ0 Transcriptional regulator n=1 Tax=Hahella chejue... 232 1e-59 UniRef50_Q1LD16 Transcriptional regulator, LysR family n=8 Tax=P... 232 1e-59 UniRef50_C7RD08 Transcriptional regulator, LysR family n=1 Tax=K... 232 2e-59 UniRef50_C5CZA2 Transcriptional regulator, LysR family n=1 Tax=V... 232 2e-59 UniRef50_Q2CCM2 Transcriptional regulator, LysR family protein n... 232 2e-59 UniRef50_A1U796 Transcriptional regulator, LysR family n=3 Tax=M... 232 2e-59 UniRef50_A4Z170 Putative transcriptional regulatory protein, Lys... 231 2e-59 UniRef50_A3Y6R5 Transcriptional regulator, LysR family protein n... 231 2e-59 UniRef50_C4I668 Transcriptional regulator, LysR family n=80 Tax=... 231 2e-59 UniRef50_A0KIB7 Transcriptional regulator, LysR family n=2 Tax=A... 231 3e-59 UniRef50_D0RZK6 Transcriptional regulator n=1 Tax=Acinetobacter ... 231 3e-59 UniRef50_A7JRS0 Possible LysR family transcriptional regulator n... 231 3e-59 UniRef50_A8FYY5 Transcriptional regulator, LysR family n=2 Tax=S... 231 3e-59 UniRef50_D1SW87 Transcriptional regulator, LysR family n=1 Tax=A... 231 3e-59 UniRef50_P52679 PCP degradation transcriptional activation prote... 230 3e-59 UniRef50_B0C4T0 Transcriptional regulator, LysR family n=1 Tax=A... 230 4e-59 UniRef50_Q0SCY7 Transcriptional regulator, LysR family protein n... 230 4e-59 UniRef50_A3RSL5 Transcriptional regulators, LysR family n=4 Tax=... 230 4e-59 UniRef50_Q0JY95 Transcriptional regulator, LysR-family n=4 Tax=P... 230 4e-59 UniRef50_B1MJW3 Putative transcriptional regulator, LysR family ... 230 4e-59 UniRef50_A5VEA0 Transcriptional regulator, LysR family n=1 Tax=S... 230 5e-59 UniRef50_A4JED2 Transcriptional regulator, LysR family n=9 Tax=P... 230 5e-59 UniRef50_A9F0I7 Transcriptional regulator, LysR family n=20 Tax=... 230 5e-59 UniRef50_Q7D3I0 Transcriptional regulator, LysR family n=1 Tax=A... 230 6e-59 UniRef50_Q081Z6 Transcriptional regulator, LysR family n=1 Tax=S... 230 7e-59 UniRef50_Q0SYQ0 Putative transcriptional regulator LYSR-type n=1... 229 7e-59 UniRef50_B4E7M9 LysR family regulatory protein n=1 Tax=Burkholde... 229 8e-59 UniRef50_Q0BYJ0 Transcriptional regulator, LysR family n=1 Tax=H... 229 9e-59 UniRef50_Q15XJ4 Transcriptional regulator, LysR family n=1 Tax=P... 229 1e-58 UniRef50_A1R1P0 Putative transcriptional regulator, LysR family ... 229 2e-58 UniRef50_A0NZC9 LysR family regulatory protein n=3 Tax=Rhodobact... 228 2e-58 UniRef50_Q399F7 Transcriptional regulator, LysR family n=1 Tax=B... 228 2e-58 UniRef50_UPI0001B54141 LysR family transcriptional regulator n=1... 228 2e-58 UniRef50_UPI0000383CFA COG0583: Transcriptional regulator n=1 Ta... 228 2e-58 UniRef50_Q5QVJ9 Transcriptional regulator, LysR family n=1 Tax=I... 228 2e-58 UniRef50_Q88LJ0 Transcriptional regulator, LysR family n=1 Tax=P... 228 3e-58 UniRef50_B7QWJ8 Transcriptional regulator, LysR family n=1 Tax=R... 227 3e-58 UniRef50_B9JQ31 Transcriptional regulator n=1 Tax=Agrobacterium ... 227 4e-58 UniRef50_Q8KY13 LysR-type transcriptional activator n=1 Tax=Rhiz... 227 5e-58 UniRef50_Q9FD34 PnbR n=2 Tax=Pseudomonas RepID=Q9FD34_PSEPU 226 7e-58 UniRef50_A8KZI9 Transcriptional regulator, LysR family n=4 Tax=A... 226 7e-58 UniRef50_Q11CG0 Transcriptional regulator, LysR family n=1 Tax=C... 226 9e-58 UniRef50_A6UK78 Transcriptional regulator, LysR family n=2 Tax=S... 226 1e-57 UniRef50_Q5E7C7 Transcriptional regulator, LysR family n=5 Tax=V... 226 1e-57 UniRef50_A3VAM0 Nodulation protein d1 n=1 Tax=Rhodobacterales ba... 225 1e-57 UniRef50_A6F7C1 Transcriptional regulator n=1 Tax=Moritella sp. ... 225 1e-57 UniRef50_Q46MT9 Regulatory protein, LysR:LysR, substrate-binding... 225 1e-57 UniRef50_B5JUQ0 Transcriptional regulator, LysR family, putative... 225 1e-57 UniRef50_Q5ZSZ0 Transcriptional regulator, LysR family n=4 Tax=L... 225 2e-57 UniRef50_A6V8B0 Transcriptional regulator, LysR family n=10 Tax=... 225 2e-57 UniRef50_D2YJX0 Transcriptional regulator, LysR family n=1 Tax=V... 225 2e-57 UniRef50_Q7MC61 Transcriptional regulator n=9 Tax=Gammaproteobac... 225 2e-57 UniRef50_B2T3Y4 Transcriptional regulator, LysR family n=3 Tax=B... 225 2e-57 UniRef50_A9BZQ9 Transcriptional regulator, LysR family n=1 Tax=D... 225 2e-57 UniRef50_A6W2N0 Transcriptional regulator, LysR family n=1 Tax=M... 225 2e-57 UniRef50_Q7WJY9 Probable LysR-family transcription regulator n=1... 224 3e-57 UniRef50_Q1R0T8 Transcriptional regulator, LysR family n=9 Tax=G... 224 3e-57 UniRef50_Q0K3U9 Transcriptional regulator, LysR-family n=2 Tax=B... 224 3e-57 UniRef50_A7K354 LysR substrate binding domain protein n=17 Tax=G... 224 4e-57 UniRef50_Q7MQI2 Transcriptional regulator n=36 Tax=Gammaproteoba... 224 4e-57 UniRef50_Q471I4 Regulatory protein, LysR:LysR, substrate-binding... 224 4e-57 UniRef50_Q4KKE5 Transcriptional regulator, LysR family n=27 Tax=... 223 4e-57 UniRef50_A0K340 Transcriptional regulator, LysR family n=1 Tax=B... 223 4e-57 UniRef50_C6XR04 Transcriptional regulator, LysR family n=1 Tax=H... 223 5e-57 UniRef50_B1LYW9 Transcriptional regulator, LysR family n=10 Tax=... 223 7e-57 UniRef50_Q1Z9L0 Putative transcriptional regulator, LysR family ... 223 7e-57 UniRef50_A1K8D7 Transcriptional regulator, LysR family n=1 Tax=A... 222 1e-56 UniRef50_Q15TE0 Transcriptional regulator, LysR family n=4 Tax=A... 222 1e-56 UniRef50_B5ZKB2 Transcriptional regulator, LysR family n=2 Tax=G... 222 1e-56 UniRef50_C6B2W9 Transcriptional regulator, LysR family n=4 Tax=R... 222 2e-56 UniRef50_A4WEP5 Transcriptional regulator, LysR family n=1 Tax=E... 222 2e-56 UniRef50_B5ZKC3 Transcriptional regulator, LysR family n=7 Tax=P... 222 2e-56 UniRef50_B0KG68 Transcriptional regulator, LysR family n=9 Tax=P... 221 2e-56 UniRef50_A4SH82 Transcriptional regulator, LysR family n=2 Tax=A... 221 2e-56 UniRef50_A5VCH0 Transcriptional regulator, LysR family n=1 Tax=S... 221 2e-56 UniRef50_A8IJ97 Putative transcriptional regulator n=1 Tax=Azorh... 221 2e-56 UniRef50_Q2BMZ3 Putative transcriptional regulator, LysR family ... 221 2e-56 UniRef50_Q081K6 Transcriptional regulator, LysR family n=2 Tax=A... 221 2e-56 UniRef50_A5CSX6 Putative transcriptional regulator, LysR family ... 221 3e-56 UniRef50_A5F3E5 Transcriptional regulator, LysR family n=29 Tax=... 220 3e-56 UniRef50_A4XRF8 Transcriptional regulator, LysR family n=2 Tax=P... 220 4e-56 UniRef50_A1UYG7 Transcriptional regulator, LysR family n=45 Tax=... 220 4e-56 UniRef50_B6R352 Transcriptional regulator, LysR family n=1 Tax=P... 220 4e-56 UniRef50_A8FU12 Transcriptional regulator n=2 Tax=Gammaproteobac... 220 4e-56 UniRef50_A0KG94 Transcriptional regulator, LysR family n=5 Tax=G... 220 4e-56 UniRef50_A6V5Q0 MexT protein n=1 Tax=Pseudomonas aeruginosa PA7 ... 220 5e-56 UniRef50_C3MFM7 Putative transcriptional regulator, LysR family ... 220 7e-56 UniRef50_A3YI62 Transcriptional regulator, LysR family protein n... 219 8e-56 UniRef50_C5A8T0 Transcriptional regulator, LysR family protein n... 219 1e-55 UniRef50_B9Z947 Transcriptional regulator, LysR family n=1 Tax=L... 218 1e-55 UniRef50_Q15XK7 Transcriptional regulator, LysR family n=1 Tax=P... 218 1e-55 UniRef50_A6GE91 Probable transcription regulator protein n=1 Tax... 218 2e-55 UniRef50_Q9RBI3 SalR n=2 Tax=Acinetobacter RepID=Q9RBI3_ACIAD 218 2e-55 UniRef50_A5V6I2 Transcriptional regulator, LysR family n=1 Tax=S... 218 2e-55 UniRef50_A6ARN3 Transcriptional regulator, LysR family n=4 Tax=V... 218 3e-55 UniRef50_A4XED3 Transcriptional regulator, LysR family n=1 Tax=N... 217 3e-55 UniRef50_Q3S4D5 LysR-like regular protein n=1 Tax=Polaromonas na... 217 3e-55 UniRef50_D0XU87 Transcriptional regulator, LysR family n=1 Tax=C... 217 3e-55 UniRef50_B5ZWA1 Transcriptional regulator, LysR family n=4 Tax=R... 217 3e-55 UniRef50_B9J825 Nod transcriptional regulator protein n=1 Tax=Ag... 217 3e-55 UniRef50_A8TNA4 Transcriptional regulator MexT n=1 Tax=alpha pro... 217 4e-55 Sequences not found previously or not previously below threshold: UniRef50_C4KB22 Transcriptional regulator, LysR family n=37 Tax=... 235 1e-60 >UniRef50_A7ZTR6 HTH-type transcriptional regulator yidZ n=122 Tax=Gammaproteobacteria RepID=YIDZ_ECO24 Length = 319 Score = 409 bits (1052), Expect = e-113, Method: Composition-based stats. Identities = 316/319 (99%), Positives = 319/319 (100%) Query: 1 MKKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPL 60 MKKSITTLDLNLLLCLQLLMQERSVTKAAKR+NVTPSAVSKSLAKLRAWFDDPLFVNSPL Sbjct: 1 MKKSITTLDLNLLLCLQLLMQERSVTKAAKRMNVTPSAVSKSLAKLRAWFDDPLFVNSPL 60 Query: 61 GLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIY 120 GLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSK+IY Sbjct: 61 GLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKRIY 120 Query: 121 QRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 QRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP Sbjct: 121 QRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 Query: 181 CVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQ 240 CVWLRKDHPALH+TWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQ Sbjct: 181 CVWLRKDHPALHETWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQ 240 Query: 241 SLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 SLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH Sbjct: 241 SLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 Query: 301 NPKIVWLRETIKNLYASMA 319 NPKIVWLRETIKNLYASMA Sbjct: 301 NPKIVWLRETIKNLYASMA 319 >UniRef50_A0KKG7 HTH-type transcriptional regulator YidZ n=3 Tax=Aeromonas RepID=A0KKG7_AERHH Length = 324 Score = 308 bits (789), Expect = 2e-82, Method: Composition-based stats. Identities = 157/313 (50%), Positives = 215/313 (68%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 + + LDLNLL+ +LL+QERSVTKAAK++NVT VSK+LA+LR WFDDPLF+ + GL Sbjct: 2 RPLIDLDLNLLVVFRLLLQERSVTKAAKKLNVTAPTVSKALARLRDWFDDPLFLRTQRGL 61 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQR 122 PT L +++E+ L EW Q+S + + P G F L ESP + LN L IY+ Sbjct: 62 EPTNLSLTLEEELKEWFQLSGNIASLCGNAIPAGAAFRLVLESPFYISFLNDLPMVIYET 121 Query: 123 YPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCV 182 Y ++TI++ NWD+ SL+ I G+ D+GF RE+HP S ++ LP ID+EVLF D P V Sbjct: 122 YRKSTIRIMNWDHHSLNDIINGDADLGFCARETHPSSLARVNRLPYYIDHEVLFEDRPMV 181 Query: 183 WLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 +LRKDHP L +TWNLD FL YPH+S+ WE SD WALD++L + G R + + + FEQ+L Sbjct: 182 FLRKDHPLLARTWNLDNFLAYPHVSVVWEASDAWALDSLLDDEGLSRQVPIRVSSFEQAL 241 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 +AAQ D+ L+A P YC Y + H L++LPLP DE+ ++L++ F LLWHKRN+HN Sbjct: 242 HIAAQSDHELIAVVPSYCASYARQHHNNLISLPLPLDEALYRQLDIAFILLWHKRNNHNT 301 Query: 303 KIVWLRETIKNLY 315 K++WLR+ IK LY Sbjct: 302 KVLWLRDEIKRLY 314 >UniRef50_C2LG43 LysR-family transcriptional regulator n=4 Tax=Enterobacteriaceae RepID=C2LG43_PROMI Length = 323 Score = 300 bits (768), Expect = 5e-80, Method: Composition-based stats. Identities = 157/311 (50%), Positives = 224/311 (72%) Query: 2 KKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLG 61 K + +DLNLL+ Q+L+QERSVT AAK ++++PSAVSK+LAKLR WFDDPLF+ SP G Sbjct: 3 NKPLHRIDLNLLVIFQILLQERSVTLAAKWLSISPSAVSKALAKLRIWFDDPLFIRSPQG 62 Query: 62 LSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQ 121 L PTPL +S+E +L++++ +S+ + +K + + P GLKF L E+PL +ML +L +QI Sbjct: 63 LIPTPLSLSIEDSLSDFINISHHIANKRNTEVPVGLKFNLVLETPLHQVMLPSLPQQILS 122 Query: 122 RYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPC 181 YP++T++++NW+Y+SL I GEVDIG GRE + RS+ELL LP IDYE+LF D+P Sbjct: 123 HYPKSTLQIKNWEYNSLSNIIDGEVDIGLVGREYYSRSKELLELLPDVIDYEILFDDIPL 182 Query: 182 VWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQS 241 V+L K+HP + W+L+ FL + +S +++ WALDN+L+E+ + R IA++ FEQS Sbjct: 183 VYLHKNHPLMKMKWDLNNFLSFSQVSTEYDKQSHWALDNILKEMNKSRQIAITYTSFEQS 242 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 LFM +QPD+ L+ AP YC+YY + H +V LP+P +L +PF LLWHKRNSHN Sbjct: 243 LFMISQPDHQLITCAPGYCRYYVKTHFPDIVTLPIPLPPVFLDQLHLPFVLLWHKRNSHN 302 Query: 302 PKIVWLRETIK 312 KI+WLR TI+ Sbjct: 303 TKIIWLRNTIR 313 >UniRef50_A9G5G2 Nodulation protein D n=2 Tax=Proteobacteria RepID=A9G5G2_SORC5 Length = 366 Score = 282 bits (722), Expect = 1e-74, Method: Composition-based stats. Identities = 75/315 (23%), Positives = 142/315 (45%), Gaps = 18/315 (5%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 + ++DLNL+ L L+ ER +T+A KR+ +T SA S +L +LR F DPLFV + GL Sbjct: 61 HDVASVDLNLVRVLGALLDERHLTRAGKRLGLTQSATSHALGRLRRLFGDPLFVRTSRGL 120 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLL--DKPHHQTPRGLKFELAAESPLMMIMLNALSKQIY 120 +PT + + + E M+ + ++P F +A ++ L ++ Sbjct: 121 APTARAEELAEPVREAMRALDRCFRAEEPFVAASAARSFSVATADYGSFVLAPKLLDRLG 180 Query: 121 QRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 + P + LR D + + RG+ D+ + LP I +L+ + Sbjct: 181 REAPNVDLWLRALDASFEEQLARGDADVVVAPAR--------RDGLPAGIHSRLLYRERF 232 Query: 181 CVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQ 240 +RK HP + + +L ++ H+ I + +D L +LG+ R +A+++P F Sbjct: 233 ACLVRKGHPLVKKGIDLASWTSMRHVFIAPRGTPGGVVDETLAQLGKRRRVALAVPHFLL 292 Query: 241 SLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 + + A D L++ R + + ++ L +V P+ K + WH+R+ Sbjct: 293 APHVVAGSD-LVVTVGARVAEAFAEILPLRVVDPPV-------KLPGFEVRMYWHERHHR 344 Query: 301 NPKIVWLRETIKNLY 315 +P W R+ ++ Sbjct: 345 DPAQQWFRDAVRGAA 359 >UniRef50_A3QJ07 Transcriptional regulator, LysR family n=25 Tax=Alteromonadales RepID=A3QJ07_SHELP Length = 330 Score = 279 bits (713), Expect = 1e-73, Method: Composition-based stats. Identities = 98/314 (31%), Positives = 162/314 (51%), Gaps = 13/314 (4%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 ++ +DLNLL+ LQ+L++ERSVT+AA R++++ SA+SKSL +LR DPLF+ + GL Sbjct: 4 DNLARIDLNLLVMLQVLLEERSVTRAASRLHLSQSALSKSLNRLRDTLGDPLFIRTAHGL 63 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGLK-FELAAESPLMMIMLNALSKQIYQ 121 PT + Q L + +Q L P + F A ++ + Sbjct: 64 KPTAHAALLGQQLPDMLQGLYQLTQPPSFNPASSRRQFSFAMVESAYETLIPYFIGPLLN 123 Query: 122 RYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPC 181 P + W SL ++ +G++D G +GR+ +P+S ++ LP I ++ LF+D Sbjct: 124 NAPNLRLDSYLWTEKSLSSLQKGQIDFGITGRDINPQSDLIIDRLPEGIAHQTLFTDHQV 183 Query: 182 VWLRKDHPALHQ----TWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPE 237 +R+ HP L W+LD +L H+ + E ++ WALD L + G+ R ++ ++P+ Sbjct: 184 CLVRQGHPMLPAIRNHQWDLDIYLEMSHVQVRCEGNEWWALDYFLAKSGQRRHLSTTVPD 243 Query: 238 FEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKR 297 F + + A D L+ + + +L+ L LPLPFD + + LLWH+R Sbjct: 244 FYGAASVCAHSD-LIFTLPSSFAAHARKLYALE--ELPLPFDFH-----SLAYVLLWHER 295 Query: 298 NSHNPKIVWLRETI 311 N P W+RETI Sbjct: 296 NDDEPGHKWIRETI 309 >UniRef50_C3KKF8 Putative transcriptional regulatory protein, LysR-family n=1 Tax=Rhizobium sp. NGR234 RepID=C3KKF8_RHISN Length = 304 Score = 279 bits (713), Expect = 1e-73, Method: Composition-based stats. Identities = 87/318 (27%), Positives = 144/318 (45%), Gaps = 22/318 (6%) Query: 1 MKK-SITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSP 59 MK +I ++DLNLL+ L+ E T+AA+RI +T AVS +L +LRA F DPLFV SP Sbjct: 1 MKPVNIASIDLNLLVVFDALVAEGHATRAAERIGLTQPAVSHALNRLRALFGDPLFVRSP 60 Query: 60 LGLSPTPLMVSMEQNLAEWMQMSNLLLD--KPHHQTPRGLKFELAAESPLMMIMLNALSK 117 G+ TP + + ++ ++L +F L ++L L+ Sbjct: 61 RGMVATPAALDAAPAIRSILEQVEVVLSGGPAFEPEESTRQFVLGLSDYAAFVLLPRLTA 120 Query: 118 QIYQRYPQATIKLRNWDYDS-LDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLF 176 ++ + P ++ +RN + L + G V++ +G P P + E+L+ Sbjct: 121 RLEREAPNISLVIRNTSHGVGLPMLEEGSVEL-IAGNFPGP---------PSHMREELLY 170 Query: 177 SDVPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLP 236 + R DHPAL +LD +L H+ + + +D VL E G +R +A+++ Sbjct: 171 EEDFVCAGRGDHPALAYPLDLDRYLSLRHLQVSTRGNPHGYVDAVLAERGLKRKVAVTVG 230 Query: 237 EFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHK 296 F + F+ D L+AT PR +L + LPL F WH Sbjct: 231 HFLMAPFLVDSSD--LVATEPR------RLFEPMPSRLPLRFFAPPIDLPPFRVVQAWHA 282 Query: 297 RNSHNPKIVWLRETIKNL 314 R+ +P WLR ++ + Sbjct: 283 RHEADPGHQWLRRVLREI 300 >UniRef50_A6T413 Transcriptional regulator, LysR family n=1 Tax=Janthinobacterium sp. Marseille RepID=A6T413_JANMA Length = 302 Score = 277 bits (710), Expect = 3e-73, Method: Composition-based stats. Identities = 78/321 (24%), Positives = 139/321 (43%), Gaps = 25/321 (7%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 +I ++DLNLL+ +++ER+VT AA R+ V+ A+S +LA+LR F+DPLFV + G+ Sbjct: 1 MNIASVDLNLLVAFDAIVKERNVTSAAVRLGVSQPAMSNALARLRIIFNDPLFVRTSQGM 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGL--KFELAAESPLMMIMLNALSKQIY 120 PTP + + ++ ++ L P F +++L L K I Sbjct: 61 QPTPYAEQLIEPVSRACELITSALQINSVFDPATTTKTFSFYMTEIGEILLLPKLLKHIQ 120 Query: 121 QRYPQATIKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 P A +++R +A+ GE+D+ L L + L++D Sbjct: 121 VAAPNACVRVRRIPEQGAKEAMANGEIDLAVG----------LFPYLKAGFYQQRLYTDK 170 Query: 180 PCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDT-WALDNVLQELGRERTIAMSLPEF 238 +R+ HP +H + ++ PH+ + + A++ +L R I M+ F Sbjct: 171 FACIVRQGHPTVHDSLTPQQYVDTPHVIVMSANTGHDAAIEKILLTEHLRRKIVMTSQNF 230 Query: 239 EQSLFMAAQPDNLLLATAP-RYCQYYNQ-LHQLPLVALPLPFDESQQKKLEVPFTLLWHK 296 + Q D +AT P R Q + ++ P+PF V WH+ Sbjct: 231 LVLPMIIEQTDA--IATIPFRMAQKIASYSTGIKILESPIPFP-------NVDIKQHWHE 281 Query: 297 RNSHNPKIVWLRETIKNLYAS 317 R ++P W+R+ + L+ Sbjct: 282 RFHYDPANKWMRDLMVTLFRE 302 >UniRef50_B9Z480 Transcriptional regulator, LysR family n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z480_9NEIS Length = 303 Score = 277 bits (708), Expect = 4e-73, Method: Composition-based stats. Identities = 76/317 (23%), Positives = 125/317 (39%), Gaps = 20/317 (6%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 + T D+ LL + + RSVT+AA + + AVS +LAKLR FDDPLFV G+ P Sbjct: 1 MQTADVRLLQVFDEIYKTRSVTRAADNLGLGQPAVSIALAKLREHFDDPLFVRIANGMEP 60 Query: 65 TPLMVSMEQNLAEWMQMSNLLLDKPHHQTP--RGLKFELAAESPLMMIMLNALSKQIYQR 122 TP+ +E + + + +L+ P F ++ +++L L Q+ + Sbjct: 61 TPMARELEHAVRQALDALDLVFGHRIDFDPASSERTFCISMTDISQLVLLPKLWAQLRKT 120 Query: 123 YPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCV 182 P I + ++ + GE D+ + L + LF Sbjct: 121 SPGVHIDIVPLSAETPRMLETGEADLALG----------FMPQLEAGFYQQSLFRQRYVC 170 Query: 183 WLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 DHP +H L F H + + LD + G R IA+ +P + Sbjct: 171 VASTDHPRIHDELTLAQFETEEHAVVTSSGTGHLILDREIARQGITRHIALRVPNYLGIA 230 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 F+ Q D +L+ R Q + + +P + WH+R H+P Sbjct: 231 FVVEQTD-MLVTIPERLAQVLEGRGRFRVFPVPFELP-------DYAVKQHWHERYHHDP 282 Query: 303 KIVWLRETIKNLYASMA 319 WLR I +L ++ A Sbjct: 283 GNRWLRRVISDLLSAPA 299 >UniRef50_A5F4D9 Transcriptional regulator, LysR family n=68 Tax=Gammaproteobacteria RepID=A5F4D9_VIBC3 Length = 327 Score = 275 bits (703), Expect = 2e-72, Method: Composition-based stats. Identities = 100/311 (32%), Positives = 166/311 (53%), Gaps = 9/311 (2%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 + + +DLNLL+CL++L++E SVT+AA R+ ++ SAVSKSLAKLR FDDPLFV + GL Sbjct: 18 EKLARIDLNLLVCLKVLIEELSVTRAAARLCLSQSAVSKSLAKLREQFDDPLFVRTSYGL 77 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHH-QTPRGLKFELAAESPLMMIMLNALSKQIYQ 121 + TP + ++ L + LL H +F++AA + +++ I++ Sbjct: 78 NATPKALFLKPKLDVLVNQLELLTQPAHFSPQSSEYRFQIAAVESVYPLIMPYFLPTIFR 137 Query: 122 RYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPC 181 P +I W + + GE+D G +G++ +L P I + ++ D Sbjct: 138 HGPHLSISTHAWTEQTFRKLQVGELDFGLTGKDIDINDAKLTLLPPADICEQEIYRDNQR 197 Query: 182 VWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQS 241 +R+ HP L WNL ++L H+ + + +D W LD L +LG ER IA+++P+F + Sbjct: 198 CVVRRGHPVLQYDWNLSSYLNLRHVQVRCDGNDRWLLDYRLADLGYERDIAITVPDFNSA 257 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 + D + TAP + ++ Q+ LV LPLP + + +TL WH+ ++ Sbjct: 258 ASLCTYTD--FIFTAPSHFTHWVA-KQMDLVELPLPMEFP-----PMAYTLFWHREREND 309 Query: 302 PKIVWLRETIK 312 P + WLRE I+ Sbjct: 310 PALRWLRELIQ 320 >UniRef50_Q2S713 Transcriptional regulator n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2S713_HAHCH Length = 329 Score = 270 bits (692), Expect = 3e-71, Method: Composition-based stats. Identities = 69/311 (22%), Positives = 140/311 (45%), Gaps = 22/311 (7%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 + +DLNLL+ +M E S++ AA+R+++T AVS ++A++R ++DPLFV + G+ P Sbjct: 1 MRNIDLNLLVIFDAIMTESSISGAAERLSMTQPAVSNAVARMRQVWNDPLFVKNGRGIQP 60 Query: 65 TPLMVSMEQNLA-EWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRY 123 T +S+ ++ +Q+ + + + + +F + ++ + + + Sbjct: 61 TTHALSLWHQVSGPLIQLKDAVNPQDFDPSTTRRRFRVGMSDITTDLIWLPMRRMVETEA 120 Query: 124 PQATIKLRNWDYDSLDA-ITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCV 182 P + + ++ ++ +T GEVD+ ++ + + LF Sbjct: 121 PNIDLHAVPANGNNSESILTNGEVDLIVG----------VMQEFRTSFRNDFLFESDYVC 170 Query: 183 WLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 +RKDHP + L+ +L+ H+ + T +D L + G R +AM++ F Sbjct: 171 AMRKDHPLAAEPLTLEKYLKADHLLVSLTGEATGFVDITLSQQGLSRRVAMTVNHFASVP 230 Query: 243 FMAAQPDNLLLATAP-RYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 + D L++ P + L + PL P +++WH R+ + Sbjct: 231 ALLEGSD--LISIVPNMVIAKGAKCGSLHVTKPPLEI-------RPTPVSMIWHARHDRD 281 Query: 302 PKIVWLRETIK 312 P ++WLRE IK Sbjct: 282 PGVLWLREKIK 292 >UniRef50_Q5P743 Transcriptional regulator, LysR family n=2 Tax=Betaproteobacteria RepID=Q5P743_AZOSE Length = 301 Score = 269 bits (688), Expect = 1e-70, Method: Composition-based stats. Identities = 67/315 (21%), Positives = 122/315 (38%), Gaps = 20/315 (6%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 + TL++ L + + RSV++AA+ + + AVS +L KLR F DPLFV + G+ P Sbjct: 1 METLEIRQLSVFDEIYKTRSVSRAAENLGLGQPAVSIALGKLREHFGDPLFVRTSAGMEP 60 Query: 65 TPLMVSMEQNLAEWMQMSNLLLDKPHHQTP--RGLKFELAAESPLMMIMLNALSKQIYQR 122 TPL + + + + + P F +A +++L L +++ Sbjct: 61 TPLGEELAEPIRVAVAAVSAASGHRAEFDPTRARRTFRIAMTDISQLVLLPRLWERLRTV 120 Query: 123 YPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCV 182 P I + N ++ + GEVD+ + L + LF Sbjct: 121 APGIHIDIANLSANTAGMLESGEVDVALG----------FMPQLEAGFYQQALFRQHYVC 170 Query: 183 WLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 HP + + L F H + + +D + +R + + +P F Sbjct: 171 MASATHPRIRRGLTLAQFEAEEHAVVSTSGTGHLIIDREIARQDIKRRVVLRIPSFVGIA 230 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 ++ + LL+ R + +L + +P P E WH R +++P Sbjct: 231 YVVERT-ALLVTIPQRLGELLADEERLRVYPVPFPLP-------EYAVKQHWHGRYNNDP 282 Query: 303 KIVWLRETIKNLYAS 317 WLR I+ L +S Sbjct: 283 GNRWLRALIQELLSS 297 >UniRef50_A6VUW1 Transcriptional regulator, LysR family n=2 Tax=Marinomonas RepID=A6VUW1_MARMS Length = 321 Score = 269 bits (688), Expect = 1e-70, Method: Composition-based stats. Identities = 82/312 (26%), Positives = 152/312 (48%), Gaps = 17/312 (5%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 ++ +DLNLL Q+L++E +VTKAA R+NV+ AVS+SL++LR F+DPLF+ + GLS Sbjct: 21 LSDIDLNLLYVFQVLIEELNVTKAATRLNVSQPAVSRSLSRLRDVFNDPLFIRTSHGLSA 80 Query: 65 TPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNALSKQIYQRY 123 T + LA+ ++ L+ +F L+ + +L + + Q+ Sbjct: 81 TAKTQDLAPLLADTLKGLESLIQPSEFTPQSSKRRFILSTTDFGTLTVLPKILDKFRQKA 140 Query: 124 PQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVW 183 P A + +++W+ D + + + +D+ + P P I L SD Sbjct: 141 PDAILDVKSWNEDMVAELDQTNIDVAVAVLSKEP---------PAGIRAMRLKSDRMVCL 191 Query: 184 LRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 RK+HP + L+++L+ H+ + + + +A+D L+++G +R +++ LP F + Sbjct: 192 ARKNHPRIEGKLTLESYLQVSHVQVVLGRREYFAVDRELEKMGHKRHVSVHLPNFVPAAR 251 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 + D LL T P+ +V LPF E ++++WH+R H+ Sbjct: 252 VVMDSDLLL--TVPKLFAEDMAATVSEIVVHELPFASR-----EFDYSMIWHERFQHDAA 304 Query: 304 IVWLRETIKNLY 315 VW R ++ + Sbjct: 305 HVWFRGLLRQAF 316 >UniRef50_A4SSQ1 Transcriptional regulator, LysR family n=2 Tax=Aeromonas RepID=A4SSQ1_AERS4 Length = 322 Score = 267 bits (682), Expect = 5e-70, Method: Composition-based stats. Identities = 106/317 (33%), Positives = 172/317 (54%), Gaps = 10/317 (3%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 + + +DLNLL+ LQ+L++ER+ ++AA+R++++ SAVSK+L +LR FDDPLFV S GL Sbjct: 4 EQLGRIDLNLLIILQVLLEERNGSRAARRLHLSQSAVSKALGRLRETFDDPLFVRSAYGL 63 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNALSKQIYQ 121 PT + ++Q L + + L+ P +F +A+ + ++ + Sbjct: 64 EPTARALVLQQQLQPILLSLDNLIQPPDFDPASTEREFVIASMDSAFTLFAPLYLSELKR 123 Query: 122 RYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPC 181 + P ++ W +SL +++G+VDI F+ RE+ S L +LP AI +L D Sbjct: 124 QAPGIRLRYEEWTENSLTEMSQGQVDIAFTVRENCISSDFRLDTLPNAICQRLLAIDDLT 183 Query: 182 VWLRKDHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQ 240 ++ DHPALH+ W+L +L YPH+ E D W LD+ L + R I ++P FE Sbjct: 184 CLVQHDHPALHEPEWDLARYLAYPHVQTYCEGRDRWMLDHKLAGMDLYRRIEATVPSFEA 243 Query: 241 SLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 +L M D +++ + Y ++ Q++ PLV LPLP L L+WH+R+ Sbjct: 244 ALRMGMHSD-MIVTLSRLYARHATQVY--PLVPLPLPIALDSISHL-----LIWHQRHEE 295 Query: 301 NPKIVWLRETIKNLYAS 317 +P WLRET+ L S Sbjct: 296 DPGHRWLRETLLALIMS 312 >UniRef50_Q12H69 Transcriptional regulator, LysR family n=14 Tax=Burkholderiales RepID=Q12H69_POLSJ Length = 342 Score = 266 bits (680), Expect = 8e-70, Method: Composition-based stats. Identities = 81/316 (25%), Positives = 132/316 (41%), Gaps = 12/316 (3%) Query: 4 SITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLS 63 + TLDLNLL +M ERS+T+AA+ +++T AVS +L +LR D L S G++ Sbjct: 29 NFRTLDLNLLRVFDEVMAERSLTRAARNLSLTQPAVSNALRRLRETLGDELVQRSGQGMA 88 Query: 64 PTPLMVSMEQNLAEWMQMSNL-LLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQR 122 PTP ++ + E +Q L+ F LA ++ L + + Q Sbjct: 89 PTPRARAIWPAVREALQRLQESLIPDEFVPGQATTTFVLAMADATAAELIPGLIETLEQE 148 Query: 123 YPQATIKLRNW-DYDSLDAITRGEVDIGFSGRESHPR--SRELLSSLPLAIDYEVLFSDV 179 P ++++ D + D+ S + S P+ + L+ Sbjct: 149 APGVSMRVIPLTTRDPRRLLDEQACDLAVGYFPSVLADLTAHAQSGEPMPFQHRRLYDGE 208 Query: 180 PCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFE 239 +RK HP LD F H+ + + +D L LGRER + +++ +F Sbjct: 209 YVCVMRKGHPLASGPLTLDRFCAARHMLVSFSGRPYGFIDESLASLGRERQVVLTVNQFF 268 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 + + A + LL PR+ + + LV PLPFD S V +WH+R+ Sbjct: 269 TAGRVVANSN--LLTVLPRHFVRVTGIAE-QLVLRPLPFDVS-----AVHVDAVWHRRSQ 320 Query: 300 HNPKIVWLRETIKNLY 315 VWLRE + Sbjct: 321 QRGAHVWLREAVLRAA 336 >UniRef50_C6ARG9 Transcriptional regulator, LysR family n=7 Tax=Proteobacteria RepID=C6ARG9_RHILS Length = 310 Score = 265 bits (677), Expect = 2e-69, Method: Composition-based stats. Identities = 74/314 (23%), Positives = 135/314 (42%), Gaps = 21/314 (6%) Query: 9 DLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLM 68 DLNLL LM+ER+VT+AA+++ +T AVS +L +LR DPLF+ G+ PT + Sbjct: 4 DLNLLPVFVALMEERNVTRAAEQLGMTQPAVSNALNRLRETLRDPLFIRERYGMKPTEMA 63 Query: 69 VSMEQNLAEWMQMSNLLLDKPHHQTP--RGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 ++ + + + ++ P +F +A S + +++ + ++ + P Sbjct: 64 EALAPVIRGALASLDDVILGQQAFDPARATRQFTIAPNSYVEFVLMPVIVARLRECAPGI 123 Query: 127 TIKLRNWDYDSLD-AITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 ++L + D + G ++ + P + + L D +R Sbjct: 124 RLRLTPFGNDLAETGAMSGATEMVLGR----------IVEPPDNMVVQHLMDDGLACVVR 173 Query: 186 KDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMA 245 KDHP + ++ + + + R H+++ L +LQ+ G R +++S+ F M Sbjct: 174 KDHPEIAESISEEQYQRMRHVNVLPPGRMRVGLFQMLQQAGLRRDVSVSVTHFLAVPEMV 233 Query: 246 AQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIV 305 A D AT PR + L LP P D + P L WH R ++P Sbjct: 234 AVTDY--CATLPRLI-CHRLARDPRLKVLPAPVDLGR-----FPVELAWHVRYRNDPAHR 285 Query: 306 WLRETIKNLYASMA 319 WLR I + ++ Sbjct: 286 WLRSLISEVAKEVS 299 >UniRef50_B1KAV0 Transcriptional regulator, LysR family n=5 Tax=Burkholderia cepacia complex RepID=B1KAV0_BURCC Length = 345 Score = 265 bits (677), Expect = 2e-69, Method: Composition-based stats. Identities = 75/318 (23%), Positives = 127/318 (39%), Gaps = 20/318 (6%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 I +DLNLL L+++R VT+A I ++ A+S +L+KLR F+DPLFV + G+ Sbjct: 1 MDIRQVDLNLLKVFDALLKKRHVTQAGVSIGLSQPAMSYALSKLRELFEDPLFVRTGRGM 60 Query: 63 SPTPLMVSMEQNLAEWMQMS--NLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIY 120 PTP ++ + +A + + +L F L M+ L L + Sbjct: 61 EPTPRAQALGEPVARLLDLVQTEILPMPEFRPAESSRNFVLCMSDIGEMVFLPRLESFLD 120 Query: 121 QRYPQATIKLRNWDYDSLDA-ITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 + P +IK L+ + G+VD+ ++ + L+ Sbjct: 121 KAAPHVSIKTVALSMPELEEGLASGDVDLAIGYFPGLNSE---------SLKRKALYRHS 171 Query: 180 PCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFE 239 R DHP + T +LD + H+ + E + L + LG + S P F Sbjct: 172 YVCIARDDHPEIGDTLSLDQYRAAAHVMVHPEGREQDVLARTHERLGIRVNVRFSTPRFI 231 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 F+ A D ++ A + + + + L+ LP P + L WH R Sbjct: 232 GVPFVVAGSD-MIAAVPQAVGRRFAEFVNVKLLPLPFPAPTYE-------LYLHWHPRFH 283 Query: 300 HNPKIVWLRETIKNLYAS 317 H P W+R+ + L Sbjct: 284 HEPANRWIRDAMSELVKG 301 >UniRef50_P10183 HTH-type transcriptional activator nahR n=67 Tax=Bacteria RepID=NAHR_PSEPU Length = 300 Score = 264 bits (675), Expect = 3e-69, Method: Composition-based stats. Identities = 77/314 (24%), Positives = 125/314 (39%), Gaps = 21/314 (6%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 + LDLNLL+ L+ +R V+ A+ + +T AVS +L +LR DPLFV + G+ P Sbjct: 3 LRDLDLNLLVVFNQLLVDRRVSITAENLGLTQPAVSNALKRLRTSLQDPLFVRTHQGMEP 62 Query: 65 TPLMVSMEQNLAEWMQMSNLLLDKPHHQTP--RGLKFELAAESPLMMIMLNALSKQIYQR 122 TP + + + M L P F LA + + L + + Sbjct: 63 TPYAAHLAEPVTSAMHALRNALQHHESFDPLTSERTFTLAMTDIGEIYFMPRLMDVLAHQ 122 Query: 123 YPQATIK-LRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPC 181 P I +R+ + A+ G VD+ LL +L L + Sbjct: 123 APNCVISTVRDSSMSLMQALQNGTVDLAVG----------LLPNLQTGFFQRRLLQNHYV 172 Query: 182 VWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQS 241 RKDHP + L+ F Y H+ + + +D + +G R I + +P F Sbjct: 173 CLCRKDHPVTREPLTLERFCSYGHVRVIAAGTGHGEVDTYMTRVGIRRDIRLEVPHFAAV 232 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 + + D LLAT P + L ALP P E+ + WH + + Sbjct: 233 GHILQRTD--LLATVPIRLADCC-VEPFGLSALPHPVVLP-----EIAINMFWHAKYHKD 284 Query: 302 PKIVWLRETIKNLY 315 +WLR+ + +L+ Sbjct: 285 LANIWLRQLMFDLF 298 >UniRef50_Q3KA14 LysR family regulatory protein n=24 Tax=Bacteria RepID=Q3KA14_PSEPF Length = 314 Score = 264 bits (674), Expect = 4e-69, Method: Composition-based stats. Identities = 68/320 (21%), Positives = 136/320 (42%), Gaps = 25/320 (7%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 +++ +DLNL + + E ++T+A + + +T AVS +LA+LR F+DPLFV + G+ Sbjct: 1 MNLSKVDLNLFIVFDAIYTEANLTRAGQIVGITQPAVSNALARLRETFNDPLFVRTAQGM 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGL--KFELAAESPLMMIMLNALSKQIY 120 PTP+ ++ + + + + + + P + ++ ++L L +++ Sbjct: 61 VPTPMAQNIIGPVRNALSLLRVSVQESRIFNPSQAVKTYRISMTDLTEAVILPPLFQRLR 120 Query: 121 QRYPQATIK-LRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 + P I+ + ++ + G +D + + + L D Sbjct: 121 RLAPTVIIESFLSKRRETTKELAAGRLDFAVDAPL----------NTDPQVRHVKLMEDR 170 Query: 180 PCVWLRKDHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEF 238 +RK HP + + LD +L HI I +S +D L ++G +R IA+ + Sbjct: 171 YVCAMRKGHPLATKEKFTLDDYLSLTHIHISSRRSGLGHVDLALGKMGIQRKIALRSQHY 230 Query: 239 EQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRN 298 + + Q D ++ T P + + + H L LP+ V L WH+ Sbjct: 231 LMASQVLQQTD--MVMTVP---ERFARRHDLHAFNLPV------NDVPPVETHLYWHEST 279 Query: 299 SHNPKIVWLRETIKNLYASM 318 +P W+RE + L + Sbjct: 280 DQDPANRWMREQMIELCQQV 299 >UniRef50_B0C5B7 Transcriptional regulator, LysR-family n=1 Tax=Acaryochloris marina MBIC11017 RepID=B0C5B7_ACAM1 Length = 300 Score = 264 bits (674), Expect = 4e-69, Method: Composition-based stats. Identities = 68/318 (21%), Positives = 131/318 (41%), Gaps = 20/318 (6%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 + DLNLL+ L +L++ERSV+K A+R+ ++ AVS +L +LR DP+ V L + Sbjct: 1 MDLRGFDLNLLVVLHILLKERSVSKTAERLQLSQPAVSAALNRLRTALKDPILVRDGLQM 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPR--GLKFELAAESPLMMIMLNALSKQIY 120 PTP + + + + L P F +A +++ L ++ Sbjct: 61 VPTPRAEQLVEPVQAIVSAIEQTLADPQPFDYSSISRTFRIATNDYGAFVLVPFLMNRMQ 120 Query: 121 QRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 + P T ++ + D A+ GE+D+ + + + + LFS+ Sbjct: 121 KIAPHLTFEIWDIALDVETALREGEIDLVIADAWTLRNCK----------CRKTLFSETF 170 Query: 181 CVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQ 240 +R++HP + +D +L+ H + T +D L + ++R + ++LP Sbjct: 171 TCLVRQNHPRVDTQLTMDDYLQEKHALVSARGRVTGNVDIALSQQNKQRQVQITLPHILA 230 Query: 241 SLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 M A D +++ A R + + L P+ D + W R + Sbjct: 231 IPAMMAATD-MIVTVATRIANRFAVDYHLQTFPPPITLD-------GFDIAMAWPHRMDN 282 Query: 301 NPKIVWLRETIKNLYASM 318 + I WLR + + + Sbjct: 283 DTAIRWLRNELVAIGVGL 300 >UniRef50_A1W256 Transcriptional regulator, LysR family n=2 Tax=Comamonadaceae RepID=A1W256_ACISJ Length = 323 Score = 263 bits (673), Expect = 5e-69, Method: Composition-based stats. Identities = 76/317 (23%), Positives = 126/317 (39%), Gaps = 12/317 (3%) Query: 4 SITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLS 63 + TLDLNLL +M ER++T+AA+++ +T AVS +L +LR D L G+ Sbjct: 5 NFRTLDLNLLRVFDEVMAERNLTRAAEKLAITQPAVSNALRRLREVLGDELVTRRGHGVE 64 Query: 64 PTPLMVSMEQNLAEWMQMSNLLLDK-PHHQTPRGLKFELAAESPLMMIMLNALSKQIYQR 122 PTP +++ + + L F LA ++ L + + + Sbjct: 65 PTPRALALWPAVRHALAQLQETLSPGRFDPASAQTTFVLAMADATGATLIPPLIEIVERE 124 Query: 123 YPQATIKLRNW-DYDSLDAITRGEVDIGFSGRESHPR--SRELLSSLPLAIDYEVLFSDV 179 P ++++ D + D+ + + S +A + L+ Sbjct: 125 APGVSLRVVPLTTRDPRRLLDEESADMAVGYFPAVLADLTARAQSDNVVAHESTRLYDSQ 184 Query: 180 PCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFE 239 +R DHP LD + H+ + + +D L LGRER I +++ +F Sbjct: 185 YVCVMRADHPLAAVPMTLDLYCAARHLLVSFSGKPFGFIDGALAALGRERRIVLTVNQFF 244 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 + + A D LL PR+ + LV PLP V LWH+R + Sbjct: 245 TAGRVVATTD--LLTVLPRHFVGVASVRD-ELVWRPLPMTLP-----PVHVDALWHRRRN 296 Query: 300 HNPKIVWLRETIKNLYA 316 H+P WLRE I Sbjct: 297 HDPAHRWLREAIARAAR 313 >UniRef50_C6XIT5 Transcriptional regulator, LysR family n=1 Tax=Hirschia baltica ATCC 49814 RepID=C6XIT5_HIRBI Length = 318 Score = 263 bits (672), Expect = 6e-69, Method: Composition-based stats. Identities = 74/314 (23%), Positives = 132/314 (42%), Gaps = 21/314 (6%) Query: 6 TTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPT 65 DLNLL L +ER+VT+AA+R+NVT AVS +L++LR F D LF+ +P G+ PT Sbjct: 3 KKFDLNLLNTFDALWRERNVTRAARRLNVTQPAVSNALSRLRETFGDELFIRTPSGVDPT 62 Query: 66 PLMVSMEQNLAEWMQMSNLLLDKPHHQTP--RGLKFELAAESPLMMIMLNALSKQIYQRY 123 + ++ E ++ L P F + A ++L L + + ++ Sbjct: 63 ERCSEIAIDVREALRHVERTLASHDSFDPTVSERTFRIGAMDYFDHVVLPPLMEDLRKKA 122 Query: 124 PQATIKLRNWD-YDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCV 182 P+ +++ ++ DA+ G++D F + P I++ + + + Sbjct: 123 PRVDLRISPVKLGETYDALDSGDLDFLFFSG----------TEPPKRINFSPMLEEKFVL 172 Query: 183 WLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 +R +HP + Q LD + HI +D++L E G R +A++ Sbjct: 173 IMRANHPKMCQEMTLDAYADLTHIVFSTRGDSHTRIDDLLAENGLRRRVALTSSHHTSIA 232 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 D + L+ R Y L V P+ F L W +R + +P Sbjct: 233 ETVRDTDMVALS-PSRLAHRYVHRGGLIAVQPPVEFP-------HFHLRLYWSRRLNSDP 284 Query: 303 KIVWLRETIKNLYA 316 +WLR + ++ Sbjct: 285 GAMWLRNILGDVCK 298 >UniRef50_A9GLW1 Transcriptional regulator, LysR family n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9GLW1_SORC5 Length = 315 Score = 263 bits (672), Expect = 7e-69, Method: Composition-based stats. Identities = 74/297 (24%), Positives = 130/297 (43%), Gaps = 20/297 (6%) Query: 22 ERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSMEQNLAEWMQM 81 E SVT+AA R+ ++ SA+S +L +LR DDP+ V +P G+ PTP + + E + Sbjct: 35 EGSVTRAAARVGLSQSAMSHALGRLRVLIDDPVLVRTPRGMIPTPRAQELIGPIREALAK 94 Query: 82 SNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQIYQRYPQATIKLRNWDYDSLD 139 + + P F +A + +I+L L +++ P + R +D + Sbjct: 95 IEATVARSPRFEPATARRSFTVATVDYVELILLPRLVQKLVSEAPFIDLVARPYDSEMWS 154 Query: 140 AITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPALHQTWNLDT 199 A+ G+VD+ LL +LP + L + +R+ HPA+ L T Sbjct: 155 AMETGKVDLAIG----------LLPALPAGFYRQRLIEERYMCVVRRSHPAVRGKLTLKT 204 Query: 200 FLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQPDNLLLATAPRY 259 + PH I +D VL E G R +A+ +P F + + AQ D L+L R Sbjct: 205 YTSLPHALISPRGEGGGRVDEVLAERGLSRRVALQIPHFLVAAHIVAQTD-LVLTVPARI 263 Query: 260 CQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWLRETIKNLYA 316 + + ++ +L ++ P+ +WH+R++ +P WLR + Sbjct: 264 ARVFAEMEELHVMKPPVEL-------GGFSVDQVWHERHAKDPAHTWLRGVFAEIAR 313 >UniRef50_Q473Q1 Transcriptional regulator, LysR family n=9 Tax=Burkholderiaceae RepID=Q473Q1_RALEJ Length = 315 Score = 262 bits (671), Expect = 8e-69, Method: Composition-based stats. Identities = 79/321 (24%), Positives = 139/321 (43%), Gaps = 23/321 (7%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 ++ +DLNL + + E S+T AA+++N+T AVS +L +LR FDDPLF G+ Sbjct: 4 MQLSRIDLNLFVVFDAIYSEGSITAAARQLNLTQPAVSHALGRLRGLFDDPLFERRGQGM 63 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQIY 120 +PTPL S+ + +Q L H P +F + L +L L ++ Sbjct: 64 APTPLARSLASEVRSALQSFARTLQDTPHFDPTNTVRRFTIGMRDALESTLLPPLMARVT 123 Query: 121 QRYPQATIKLRNWDYDSLD-AITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 PQ I +D ++ + G +D ++L + AI + +D Sbjct: 124 SVAPQVEIAAIRFDRREMESELLAGTIDAAI----------DILLPVSPAIHHAQFMADP 173 Query: 180 PCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFE 239 V R+DHP + + L+ +L H+ + + D L +G R + + + Sbjct: 174 MIVLARRDHPLVKKELTLERYLAAEHVHVSSRRRGAGLEDQALHRMGLTRRVRLRCQHYA 233 Query: 240 QSLFMAAQPDNLLLATAP-RYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRN 298 + + + D LLAT P RY + N+ + +++LP K + L WH Sbjct: 234 AACRVVSCTD--LLATLPLRYARIANEPYANRILSLPF-------KVPSLELHLYWHAGG 284 Query: 299 SHNPKIVWLRETIKNLYASMA 319 ++ WLRE + + +S+ Sbjct: 285 ENDGANRWLREQLMAVMSSLG 305 >UniRef50_A0LD88 Transcriptional regulator, LysR family n=1 Tax=Magnetococcus sp. MC-1 RepID=A0LD88_MAGSM Length = 312 Score = 262 bits (671), Expect = 9e-69, Method: Composition-based stats. Identities = 72/319 (22%), Positives = 137/319 (42%), Gaps = 19/319 (5%) Query: 1 MKKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPL 60 +K+ + DLNLL+ LM ER VT+A +R+ +T +A+S +L +LR FDDPLF+ + Sbjct: 5 VKEGLNKFDLNLLVAFDALMSERGVTRAGRRLGITQAAMSNTLRRLRTAFDDPLFIKTGA 64 Query: 61 GLSPTPLMVSMEQNLAEWMQMSNLLLD-KPHHQTPRGLKFELAAESPLMMIMLNALSKQI 119 + PTP + + + ++ ++ LD F + + ++ AL + Sbjct: 65 RMEPTPRAMELSGMIEAALKQVHVALDNDSFDPANSHYVFRVGMVDYTVPLVFPALLDHL 124 Query: 120 YQRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 + P +++ N + + GEVD+ S + PR + V+ Sbjct: 125 EKYAPNCILEVVNTGDFEGEMLESGEVDLVLSRLDQAPR----------GLKSRVVGEIP 174 Query: 180 PCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFE 239 R HP + + L+ +L+ H+ +D L+ + +ER + + L F Sbjct: 175 FVCIYRPGHPLIKEPMTLEQYLQARHVHYYPPMVKEGLVDLGLKAINQERNVVVRLDSFG 234 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 + A+ D + T + + + L PLPF+ + F ++WH R+ Sbjct: 235 MVPTLVAETDLIAAVT---HTSAHVIAPAMGLKVQPLPFEAPPLQ-----FVMVWHDRSE 286 Query: 300 HNPKIVWLRETIKNLYASM 318 + W RE + ++ S+ Sbjct: 287 ESAPHQWFREQVLHMLISL 305 >UniRef50_Q2S7V2 Transcriptional regulator n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2S7V2_HAHCH Length = 310 Score = 262 bits (671), Expect = 1e-68, Method: Composition-based stats. Identities = 83/318 (26%), Positives = 136/318 (42%), Gaps = 21/318 (6%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 I+ +DLNL + + E +T+A++ +++T AVS +L +LR D LF+ S G+ Sbjct: 1 MHISRIDLNLFVVFDAIYSEGGITRASEVLHLTQPAVSHALNRLRETLGDELFIRSSRGM 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGLK--FELAAESPLMMIMLNALSKQIY 120 +PTP + + + + L + P L+ F L +++L AL K Sbjct: 61 TPTPYAHQLIGTVRQALNQLQRGLHQGQEFAPAQLETSFRLCVRDLFDVLLLPALIKNCR 120 Query: 121 QRYPQATIK-LRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 P+ LR+ L + G +D+ ++L S +I +E LF D Sbjct: 121 AIAPKVVFNCLRSPREQILHDLASGRIDLA----------ADVLISHDDSICHEKLFEDR 170 Query: 180 PCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFE 239 LR+DHPAL W+L LR+PH+ + + D L G +R + + P F Sbjct: 171 LTCLLRRDHPALASEWSLAEMLRWPHVQVSSREHGPGYEDIQLSRHGLQRKLGLRTPNFY 230 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 + AA D +L A + + Q +PL +P P + L WH+ Sbjct: 231 GAALTAANSDLILCA-PEQVARKLTQ--TIPLQVMPFPL-----TLNPLETYLYWHRSTD 282 Query: 300 HNPKIVWLRETIKNLYAS 317 P +WLRE + A Sbjct: 283 REPAHIWLREQTQRALAQ 300 >UniRef50_A9FW21 Transcriptional regulator, LysR family n=2 Tax=Myxococcales RepID=A9FW21_SORC5 Length = 333 Score = 262 bits (669), Expect = 2e-68, Method: Composition-based stats. Identities = 84/312 (26%), Positives = 135/312 (43%), Gaps = 18/312 (5%) Query: 4 SITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLS 63 I +++LNLL L+ L+ E SV+ AA+R +V+ SA+S SLA+LR F DPL V GL+ Sbjct: 21 DIRSINLNLLPALEALLVEGSVSGAARRAHVSQSAMSHSLARLRELFGDPLLVPLGRGLT 80 Query: 64 PTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQIYQ 121 PTP + + L + L P PR F +A + L + + + Sbjct: 81 PTPRALQLRAALPAAFEHLRRALASPEPFDPRTSARTFRVATIDYFELTTLPDVLDHLGE 140 Query: 122 RYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPC 181 P +++ + D A+ G++D+ G + L L+ D Sbjct: 141 HAPFVRLEIERFSPDVTPALVLGDIDLALFGASQPVPAAGL--------RRAPLYQDPFA 192 Query: 182 VWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQS 241 V RK HPA+ + +LDT++ H+ + E A+D L LG+ R +A+ LP F + Sbjct: 193 VMARKGHPAIKRRLDLDTYVALGHVLVSVEGHRGGAVDRALARLGKTRRVALRLPHFMSA 252 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 D LL Q +L L + A P +Q +W +R+ + Sbjct: 253 PLAVRSSD-LLCTIPSSVAQRARELFGLRVFAPPFELPAAQ-------VVAVWSQRHDDD 304 Query: 302 PKIVWLRETIKN 313 P W R+ + Sbjct: 305 PAQRWFRDLFFS 316 >UniRef50_Q30XG7 Conserved hypothetical transcriptional regulator, LysR family n=1 Tax=Desulfovibrio desulfuricans subsp. desulfuricans str. G20 RepID=Q30XG7_DESDG Length = 309 Score = 260 bits (665), Expect = 5e-68, Method: Composition-based stats. Identities = 88/320 (27%), Positives = 142/320 (44%), Gaps = 22/320 (6%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 I++++LNLL+ L+ L+ E +VT+AA+R+++T S +SK+LA+LR FDDPL V S L Sbjct: 1 MDISSVNLNLLVALKALLDEGNVTRAAERLHITQSGMSKNLAQLRELFDDPLLVRSGNAL 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGLK-FELAAESPLMMIMLNALSKQIYQ 121 T +E L + + L + + F LA + +L I Sbjct: 61 VLTERARELEGPLEMVLGNVHALFEAQRFDPATCRRSFTLAVTDYVAQYILPDALGAILA 120 Query: 122 RYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPC 181 P I+ W+ DS+ A+ G++D+ E P S E L + D Sbjct: 121 AAPGIDIQAIGWEPDSMRALAEGKIDMATCLTEGVPASVEQLR----------VGEDRFA 170 Query: 182 VWLRKDHP-ALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQ 240 +R HP A LD +++ H +I +D VL +LG R I + +P + Sbjct: 171 CLMRAGHPLAAAGAMRLDRYVQADHAAITIGGDKVRIIDRVLGKLGHSRNIRLRVPFYAS 230 Query: 241 SLFMAAQPDNLLL--ATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRN 298 ++ + ++ D LL A R + L PLPF ++++WH R Sbjct: 231 AVEIVSRTDLLLTLPAHVARNVIQARNPSEPALAWAPLPFAVD-----SFEYSIIWHARF 285 Query: 299 SHNPKIVWLRETIKNLYASM 318 +P W+RE L+A M Sbjct: 286 HGDPGHRWVREM---LFAQM 302 >UniRef50_Q12M05 Transcriptional regulator n=3 Tax=Gammaproteobacteria RepID=Q12M05_SHEDO Length = 309 Score = 260 bits (664), Expect = 5e-68, Method: Composition-based stats. Identities = 76/319 (23%), Positives = 144/319 (45%), Gaps = 21/319 (6%) Query: 1 MKKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPL 60 M ++ LDLNLL+ +M+E+S++ AA+++ +T +VS ++A++R + DPLF+ Sbjct: 1 MSAGMSKLDLNLLVIFDAIMKEQSISAAAEQLAMTQPSVSNAVARMRHNWKDPLFIKQGR 60 Query: 61 GLSPTPLMVSMEQNLAEWMQMSNLLL-DKPHHQTPRGLKFELAAESPLMMIMLNALSKQI 119 G+ P+P +++ Q +A ++ + K + F +A + AL + + Sbjct: 61 GIKPSPFALALWQQVASPLEQIRSAVSSKTFNAAHSERTFRIAITDGTSGLFWPALRRHL 120 Query: 120 YQRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 + P+ + + D + EVD+ E+ R ++LS + LF + Sbjct: 121 ERHAPKINLHAVPYKLDGEALLVNAEVDLVLDYYEN--RHPQILS--------QHLFDNQ 170 Query: 180 PCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFE 239 + K H +T LD F H+ + + +D L +LG R IAM++ F Sbjct: 171 FVCVMAKAHALSEKTLTLDDFAAAEHLLVSLSGDASGTVDRKLAQLGHSRRIAMTVNSFA 230 Query: 240 QSLFMAAQPDNLLLATAP-RYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRN 298 + + + L++T P + L +L + LP VP ++ WH RN Sbjct: 231 SAKTLIEESR--LISTLPYSIIASWQSLDKLTVKTLPFTVP-------SVPISMAWHSRN 281 Query: 299 SHNPKIVWLRETIKNLYAS 317 + + WLRE I ++ + Sbjct: 282 DASISLRWLREAIVDIVKT 300 >UniRef50_Q15UP0 Transcriptional regulator, LysR family n=4 Tax=Alteromonadales RepID=Q15UP0_PSEA6 Length = 305 Score = 259 bits (662), Expect = 1e-67, Method: Composition-based stats. Identities = 79/319 (24%), Positives = 136/319 (42%), Gaps = 24/319 (7%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 ++ +DLNL + S+TKAA + +T AVS SLA+LR +DPLFV + + Sbjct: 1 MNLNRIDLNLFAVFDAIYTAGSLTKAADVLCITQPAVSNSLARLREMLNDPLFVRTGHSM 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFE--LAAESPLMMIMLNALSKQIY 120 +PTP ++ E + + + + H P + AA L ++ L+ Q+ Sbjct: 61 TPTPAAQNIIGPAREALGLLRKSVQESHTFDPATAEISYNFAARDLLEASIMPRLTAQLQ 120 Query: 121 QRYPQATIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 P T+ + + + A+ G +D + + + + + + D Sbjct: 121 NVAPNITLTNYDISRSNIVSAMASGSLDF---------YADASSAFVDPHLCKQKIAEDR 171 Query: 180 PCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFE 239 V R++HPAL Q NLDTFL+ HI+I ++ +D L +L +R + M F Sbjct: 172 FVVIARRNHPALSQGLNLDTFLQLGHINISQRRTGAGPIDVALDKLNLKRRVVMRGQHFL 231 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 + + D L+A P + + LPF+ + V + L WH Sbjct: 232 TVPAVIVKTD--LIACVPYHLAKH-----YDCSIYELPFELA-----PVEYFLYWHVSAD 279 Query: 300 HNPKIVWLRETIKNLYASM 318 H+ +WLRE I + + Sbjct: 280 HDHAHMWLREQIAEVVTTF 298 >UniRef50_A0LD87 Transcriptional regulator, LysR family n=1 Tax=Magnetococcus sp. MC-1 RepID=A0LD87_MAGSM Length = 322 Score = 259 bits (661), Expect = 1e-67, Method: Composition-based stats. Identities = 82/320 (25%), Positives = 133/320 (41%), Gaps = 21/320 (6%) Query: 1 MKKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPL 60 MK ++ DLNLL+ LM ER VT+A + + +T +A+S +L +LR FDDPLFV + Sbjct: 6 MKHNLNKFDLNLLVAFDTLMTERGVTRAGRALGITQAAMSNTLRRLRELFDDPLFVKTGS 65 Query: 61 GLSPTPLMVSMEQNLAEWMQMSNLLLDKP-HHQTPRGLKFELAAESPLMMIMLNALSKQI 119 + PTP + + +A ++ L++ F L +++ L + + Sbjct: 66 SMEPTPRAIELSTPVALALEEVRKALNQEGFDPMMASENFRLGMIDYASAMLMPGLVRHM 125 Query: 120 YQRYPQATIKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSD 178 Q P+A +++ + D + + RG VD+ FS +P + LFS Sbjct: 126 SQVAPRAKMQVVDVGGDEEVANLERGAVDLVFSR----------FQWVPPKVCINRLFSM 175 Query: 179 VPCVWLRKDHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPE 237 +HP + + ++D FL H+ D +D L E+G +R I L Sbjct: 176 EYVAVFCPNHPGVEGGSLSMDAFLASRHVHYYPRGMDNTVVDETLAEMGEKRNIIGKLAS 235 Query: 238 FEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKR 297 F M A ++A P L L LPF + L WH R Sbjct: 236 FGMLPAMLASSH--VMAVMPEGAAKVVA-RPLGLRVEKLPFKTPLLR-----MALAWHPR 287 Query: 298 NSHNPKIVWLRETIKNLYAS 317 +P VW R+ +K + Sbjct: 288 TDRDPSHVWFRQQVKFVLKE 307 >UniRef50_B4X4B4 LysR substrate binding domain protein n=1 Tax=Alcanivorax sp. DG881 RepID=B4X4B4_9GAMM Length = 304 Score = 258 bits (660), Expect = 2e-67, Method: Composition-based stats. Identities = 74/320 (23%), Positives = 137/320 (42%), Gaps = 23/320 (7%) Query: 1 MKKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPL 60 MK ++ ++DLNLL +M+ +++AA+ + ++ A+S +L +LR F D LFV + Sbjct: 1 MKLNLRSIDLNLLPVFDAIMEAGQLSRAAESLGMSQPAISAALQRLRHTFGDTLFVRTHH 60 Query: 61 GLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQ 118 G++PTP + L + L+ + P F + + M++L L Sbjct: 61 GMTPTPRARELHDQLGPQLVALRDTLNPENRFDPATSQRHFRILSVDYFEMVVLGPLLAT 120 Query: 119 IYQRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSD 178 + Q+ P +++ D D D + +G D+ S + + + VL + Sbjct: 121 LRQQAPHVVLEIIAADDDMPDELHKGRADL----------SVDAFVADDDRLQRNVLLEE 170 Query: 179 VPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEF 238 V R+ HP + + FL H+ + ++ LD +L G +R + +F Sbjct: 171 KLVVIARRSHPHIKGHCDKQQFLDAEHV-VLPNRNRQLPLDQILNAPGWQRRTGARVTQF 229 Query: 239 EQSLFMAAQPDNLLLATAP-RYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKR 297 L + D L+AT P R Q Y + QL ++ P+ VP ++W Sbjct: 230 ASMLAVCGGSD--LIATVPDRLAQQYAETMQLQVLPFPVALP-------PVPIYMIWSPT 280 Query: 298 NSHNPKIVWLRETIKNLYAS 317 +P WLR+ +++ A Sbjct: 281 QQRDPAHRWLRQQLEHTIAQ 300 >UniRef50_B6R1K2 Transcriptional regulator, LysR family n=1 Tax=Pseudovibrio sp. JE062 RepID=B6R1K2_9RHOB Length = 293 Score = 258 bits (660), Expect = 2e-67, Method: Composition-based stats. Identities = 77/312 (24%), Positives = 138/312 (44%), Gaps = 23/312 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +DLNLLL + + ER++T+A+KR+N+T AVS +L +LR F DPLF+ + G+ PT L Sbjct: 1 MDLNLLLVFEAVYSERNLTRASKRLNLTQPAVSNALRRLRDTFQDPLFIRTADGMVPTDL 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQIYQRYPQ 125 + + + ++M + P G F ++ M++L L K++ ++ P Sbjct: 61 AEQLAGRVLDALEMLRS-FESRESFDPAGLSRDFRISISDYNGMLVLPRLLKELAEQAPG 119 Query: 126 ATIKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 +I + + ++ G+VD+ + ++ + YE L+SD Sbjct: 120 VSITTSQIQRAHVSEHLSTGQVDLVLAPKQDV-----------ANLSYEPLYSDDYVGVA 168 Query: 185 RKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 + +L+ + + H+ E +D L +LG++R + + + Sbjct: 169 SAHYGPEGGQMSLEEYCQREHLLFSLEGYGRSTVDVALSKLGKKRKVVLRSSHVHTIPHV 228 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 +AT PR + L + L + LPF+ + L WH R H+P Sbjct: 229 LEGS--AFIATLPRLIT-LDYLKRFELTSFSLPFELKGHE-----VGLHWHARQHHDPAH 280 Query: 305 VWLRETIKNLYA 316 WLR IK L+A Sbjct: 281 EWLRGLIKELFA 292 >UniRef50_A1WRT3 Transcriptional regulator, LysR family n=1 Tax=Verminephrobacter eiseniae EF01-2 RepID=A1WRT3_VEREI Length = 315 Score = 257 bits (658), Expect = 3e-67, Method: Composition-based stats. Identities = 77/318 (24%), Positives = 133/318 (41%), Gaps = 20/318 (6%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 ++ +LNLL + + RSV+ AA+ +++T AV+ +L KLR FD+PLFV + G+ Sbjct: 1 MDLSEFNLNLLTFFDAIYRHRSVSAAAQELDLTQPAVTAALNKLRVHFDNPLFVRTSNGM 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDK-PHHQTPRGLKFELAAESPLMMIMLNALSKQIYQ 121 PTP ++ +A + L + P +F++ MM+ L + + + Q Sbjct: 61 HPTPWADALAPKIAHVLDSVRRLDEPTPFQPQSAKNQFKIYVNDIGMMLALPKIVQLLNQ 120 Query: 122 RYPQATIKLRNWDYDS-LDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 P + + + D ++A+ GE+D+ +P + L Sbjct: 121 DAPHTQLTVIDLRQDEVVNALDVGEIDLAIG----------YFVGVPNWARQQHLRDTSY 170 Query: 181 CVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQ 240 +RKDHP++ T L +L H S LD L + G R IA+ +P Sbjct: 171 VCAMRKDHPSIGDTMTLTQYLNARHAMYWTHGSTYGRLDEALAKRGFSRDIAVRIPRLGA 230 Query: 241 SLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 F+AA D ++ + L + LV +P+ Q K+ WH+R Sbjct: 231 IPFLAAFSDF-VVTIPEDLGLLFRDLIPIKLVPVPISLPSFQVKQ-------YWHERLHA 282 Query: 301 NPKIVWLRETIKNLYASM 318 + WLR I + + Sbjct: 283 DSAHKWLRTLILQIMKQL 300 >UniRef50_A8GKS5 Transcriptional regulator, LysR family n=1 Tax=Serratia proteamaculans 568 RepID=A8GKS5_SERP5 Length = 314 Score = 257 bits (657), Expect = 4e-67, Method: Composition-based stats. Identities = 71/318 (22%), Positives = 122/318 (38%), Gaps = 20/318 (6%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 ++ +DLNLL+ + ++RSV A + + ++ AVS +LA+LR FDDP+FV + Sbjct: 1 MNLKNVDLNLLVVFDAIFRQRSVGLAGQMLGISQPAVSHALARLRQLFDDPMFVRINNEM 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQIY 120 PT + ++ + M + +P P L L L + Sbjct: 61 RPTDRASELMPSVERVLSMIRDDVLQPVGFDPAANRRTLTLCMPDIGEQYFLPPLINHLA 120 Query: 121 QRYPQATIKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 Q P + L +A+ G VD+ R+ + LF Sbjct: 121 QVAPGMAVVSHELAPAQLEEALESGRVDLAIGYFPDLRRA---------VFYQQRLFYSG 171 Query: 180 PCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFE 239 C +R+ HP + +T +L FL+ H++ + ++E G R + + F Sbjct: 172 FCCAVRQGHPQIGKTLSLPQFLQAEHVTARLRIRSQEIAEQAMREQGIVRNVKLQTSHFL 231 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 + AQ D L T Q ++ + +P P + P WH+R Sbjct: 232 SLTQIIAQTDLLATVTY-EAAQLLQAAGKVHIYPVPFPIP-------QFPVMQYWHERAH 283 Query: 300 HNPKIVWLRETIKNLYAS 317 H+ WLR I+ L+ Sbjct: 284 HDRGNQWLRGEIRGLFQR 301 >UniRef50_Q0BPL7 Transcriptional regulators, LysR family n=1 Tax=Granulibacter bethesdensis CGDNIH1 RepID=Q0BPL7_GRABC Length = 308 Score = 257 bits (656), Expect = 5e-67, Method: Composition-based stats. Identities = 78/321 (24%), Positives = 128/321 (39%), Gaps = 21/321 (6%) Query: 1 MKKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPL 60 + ++++ LDLNLL + ERSVTKAA+ I V SA+S +LA+LR D LFV +P Sbjct: 4 VHRNLSRLDLNLLTAFDAIYTERSVTKAAECIGVGQSAMSHNLARLREALQDELFVRTPS 63 Query: 61 GLSPTPLMVSMEQNLAEWM--QMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQ 118 G+ PTP ++ + + LL + + + + +++ L Sbjct: 64 GMEPTPRARAIADTVRNLLWTVQDKLLTTRSFTPATAERIWRIGLADNIESLLMPPLLDM 123 Query: 119 IYQRYPQATIK-LRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFS 177 + + P I+ + L+A+ R E+D+G + + P Sbjct: 124 MLKEAPGMRIQAIFTDGLRVLEALDRDELDMGIGVFRHGGNVHKRRNFAP---------- 173 Query: 178 DVPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPE 237 D L LD + PH+ + D+ L LGR RTI M+ P Sbjct: 174 DSYLCLYDPKQITLEGPITLDQYASLPHVLVSLRGIFHGVADDALSLLGRTRTIVMTTPH 233 Query: 238 FEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKR 297 F ++ ++ T P L PLPF+ + ++LWH Sbjct: 234 FLSVPYVLRG--APVITTLPGTLARSAASAH-GLCVSPLPFELA-----PFRLSMLWHSS 285 Query: 298 NSHNPKIVWLRETIKNLYASM 318 ++P WLR T+ +L M Sbjct: 286 YDNDPAHRWLRNTVASLMDQM 306 >UniRef50_A5V8P8 Transcriptional regulator, LysR family n=1 Tax=Sphingomonas wittichii RW1 RepID=A5V8P8_SPHWW Length = 316 Score = 257 bits (656), Expect = 5e-67, Method: Composition-based stats. Identities = 86/323 (26%), Positives = 140/323 (43%), Gaps = 18/323 (5%) Query: 1 MKKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPL 60 M S+T DLNLL+ L L+ E+SVT+AA+R+ VT AVS SLA+LR F+DPL V Sbjct: 1 MALSLTQFDLNLLVVLDALLTEKSVTRAAERLFVTQPAVSGSLARLRDIFEDPLLVRVGR 60 Query: 61 GLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGLK--FELAAESPLMMIMLNALSKQ 118 + T ++ + E + M L P K F +A M +L + ++ Sbjct: 61 EMELTVRARALAGPVREALLMVKAALGSEESFDPAETKCEFRIAMTDYCSMTILPRIVRE 120 Query: 119 IYQRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSD 178 + R P + + S D + GE+D + E R+ + S P + F D Sbjct: 121 LSARAPGIELAVEGLVNKSFDRLETGEIDFLLTVVE---RTLLMHSRHPDMLRGADAFED 177 Query: 179 VPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQEL-GRERTIAMSLPE 237 + DHP + F YP+ ++ + +T+ D E G +++ A+ P Sbjct: 178 CYTCVVAADHP-FDGALTPEDFRAYPNATVSF-GENTFTTDRAAYEHGGLDQSPALIAPS 235 Query: 238 FEQSLFMAAQPDNLLLATAP-RYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHK 296 F LF L+ T P R + + + + L+ P+ ++ L WH Sbjct: 236 FSSLLFQLQGTT--LIGTVPNRLAEMFAPMLGVRLLEPPIRLPTLTER-------LNWHV 286 Query: 297 RNSHNPKIVWLRETIKNLYASMA 319 R+ +P W+R I ++ SM Sbjct: 287 RSDADPGHSWMRNLILDVGRSMG 309 >UniRef50_C9NXV6 Transcriptional regulator LysR family n=1 Tax=Vibrio coralliilyticus ATCC BAA-450 RepID=C9NXV6_9VIBR Length = 303 Score = 255 bits (653), Expect = 1e-66, Method: Composition-based stats. Identities = 75/318 (23%), Positives = 133/318 (41%), Gaps = 23/318 (7%) Query: 4 SITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLS 63 +I+ ++L+ L LQ++ + +++T+A +R +T SAVS +L KLR F+D L + + Sbjct: 3 NISDIELSQLRLLQIIFETKNLTQAGERAGLTQSAVSHTLKKLRHSFNDSLVIRQGNKMV 62 Query: 64 PTPLMVSMEQNLAEWMQMS--NLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQ 121 TP S++ +L W+ N+L + F +A + I+ LS+ + Sbjct: 63 LTPRAESLQTSLGRWLNDFERNILFQEVFDPLTSDRTFYIATSDLVEHILAPHLSRHFGR 122 Query: 122 RYPQATIKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 P I R + +L I GEVD S ++ S + L+ D Sbjct: 123 IAPNIRIVFRKIEKRALASQIESGEVDFAIS----------VIDSTHPNLMVRTLYRDDF 172 Query: 181 CVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQ 240 +R HP L+ F +YPH+ + +D+ L+ LG R + + F Sbjct: 173 VSVVRAGHPLLNSKIKAKDFCQYPHVLASTGNDNRGMVDDALEGLGLSRVMQYKVANFSS 232 Query: 241 SLFMAAQPDNLLLATAPR-YCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 + ++ D +L TAPR + + P+ + K + WH +N Sbjct: 233 APYIVESSDAIL--TAPRTFVDLIAGKFNVSSFTPPVELESYAMK-------MYWHIKNK 283 Query: 300 HNPKIVWLRETIKNLYAS 317 + W RE I + A+ Sbjct: 284 DDQANRWFREQIAEITAA 301 >UniRef50_Q210Z5 Transcriptional regulator, LysR family n=2 Tax=Alphaproteobacteria RepID=Q210Z5_RHOPB Length = 301 Score = 255 bits (652), Expect = 2e-66, Method: Composition-based stats. Identities = 72/308 (23%), Positives = 134/308 (43%), Gaps = 21/308 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 LDLNLL+ L L+ E SV AA R+N++P A+S+ LA++R +DP+ V + GL TP Sbjct: 10 LDLNLLVTLDALLSEGSVAGAANRMNLSPPAMSRQLARIRHLMNDPVLVRAGRGLVATPR 69 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQIYQRYPQ 125 ++ + + +Q + L+ P F + + + A+ + + Q+ P Sbjct: 70 AEAVRAQVRQLVQDAEGLVRGNADLDPATIERTFTIRSSDGFVGTFGAAIVELVVQQAPN 129 Query: 126 ATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 A ++ + +D++ G VD+ ++ + I + LF D +R Sbjct: 130 ARLRFVGEGNEDVDSLRDGRVDLDIG----------VIDGMGPEIRLQTLFRDRYIGVVR 179 Query: 186 KDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMA 245 DHP +T ++ F+ YPH+S+ +D L G RT+++++ L + Sbjct: 180 ADHPLAQETVTIENFVAYPHVSVSRRGRFEGPVDTALALQGMRRTVSVAVANVADGLSIV 239 Query: 246 AQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIV 305 ++ D+++L Y H F+ P ++ WH R + Sbjct: 240 SRSDHIVLLPGRIAAWYRRDFHG---------FELPVVTDELPPISIAWHPRFEKDAAHR 290 Query: 306 WLRETIKN 313 WLR ++ Sbjct: 291 WLRTCVRE 298 >UniRef50_D0LKM3 Transcriptional regulator, LysR family n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LKM3_HALO1 Length = 307 Score = 255 bits (651), Expect = 2e-66, Method: Composition-based stats. Identities = 80/312 (25%), Positives = 130/312 (41%), Gaps = 22/312 (7%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 ++ ++LNLL+ L L+ ERSV++AA+R V+ A+S+SL +LRA FDD L L Sbjct: 6 LSEINLNLLVSLDALLTERSVSRAARRTGVSQPAMSQSLRQLRAIFDDALLARDRGVLVL 65 Query: 65 TPLMVSMEQNLAEWMQMSNLLLD--KPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQR 122 TP + L + +LD KP +F +A + +L L ++ + Sbjct: 66 TPAAERLMVPLRHALVAVQRVLDGEKPFDPGRAERRFTIAVGDFAAVTLLPPLLERASRE 125 Query: 123 YPQATIKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPC 181 P +R + L + + GE D+ + ++L+ D Sbjct: 126 APGIGFDVRPAEPTRLFERLATGEFDLVIGAKL----------DASGDFMRQLLYRDGFV 175 Query: 182 VWLRKDHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQ 240 R+DHP L +L+ + PH+ I +D +L E G++R IA+ +P F Sbjct: 176 CMARRDHPELSGDALDLERYAALPHVLISPTGEGPSVVDRLLAERGKQRRIALRIPYFLA 235 Query: 241 SLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 + M + D L+L + H L L PL LWH+R Sbjct: 236 APLMVVRSD-LVLTAPRSVAGAFASTHALALFEPPLELP-------SFGVYQLWHQRYQS 287 Query: 301 NPKIVWLRETIK 312 + WLRE + Sbjct: 288 DDAHRWLRELVA 299 >UniRef50_B7WQP0 Transcriptional regulator, LysR family n=1 Tax=Comamonas testosteroni KF-1 RepID=B7WQP0_COMTE Length = 295 Score = 255 bits (651), Expect = 2e-66, Method: Composition-based stats. Identities = 71/311 (22%), Positives = 129/311 (41%), Gaps = 22/311 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +D+ LL + + RSV++A + + + ++VS +L +LR F+D LFV + G+ PTP Sbjct: 1 MDMKLLSVFDEIYKTRSVSRAGENLGLAQTSVSLALGRLRRAFNDQLFVRTSEGMLPTPR 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTP--RGLKFELAAESPLMMIMLNALSKQIYQRYPQ 125 ++ L + +++ + P F LA + L AL ++ P+ Sbjct: 61 AAALVPQLRQALELLQSATRQQAEFDPASSSRAFRLAMTDISHLEFLPALMNKLGNIAPK 120 Query: 126 ATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 +++ D+ + G+ D+ + L + LF D +R Sbjct: 121 VRVEVLRITADTARLLEAGDADLAIG----------YMPELDAGFYQQKLFRDGFACVVR 170 Query: 186 KDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMA 245 + HP + + F H+ I + ++ L+ G +R +A+SLP + Sbjct: 171 RTHPRIDDNLTMTRFKTERHVIITAPGTGNEIVEQELKRQGAQRNVALSLPTLPGVGNLL 230 Query: 246 AQPDNLLLATAP-RYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 A D L+AT P R Q ++ Q+ +A P E WH+R +P Sbjct: 231 AHTD--LIATVPHRIAQTLVKIAQVKAIASPYRLP-------EFAIKQHWHERYQQDPAN 281 Query: 305 VWLRETIKNLY 315 WLR T+ L+ Sbjct: 282 RWLRSTLAELF 292 >UniRef50_B7VQ45 Transcriptional regulator n=8 Tax=Vibrionales RepID=B7VQ45_VIBSL Length = 311 Score = 255 bits (651), Expect = 2e-66, Method: Composition-based stats. Identities = 98/312 (31%), Positives = 141/312 (45%), Gaps = 9/312 (2%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 KS+ D+NLLLCL +L++ERSV+K A+R+ ++ SAVSK L KLRA FDDPLF GL Sbjct: 5 KSLLKCDMNLLLCLHVLIEERSVSKTAERLFLSQSAVSKQLTKLRALFDDPLFERESKGL 64 Query: 63 SPTPLMVSMEQNLAE-WMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQ 121 PTP +++ + + +Q+ L + + F + + Sbjct: 65 FPTPKALALAPKIHQILLQIEKLTVPEVFDPKDSERTFTIDLVETAYTAIYPHFMPTALA 124 Query: 122 RYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPC 181 P TI W DS + + EVD G E R+ + +P +DY L D Sbjct: 125 DAPHITINSSTWSSDSFKRLLKREVDFGIGIFELDERASTHVQCIPDELDYVELCLDYSV 184 Query: 182 VWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQS 241 +R DHPAL + WNL TFL+Y HI + + W L VL E A ++ + + Sbjct: 185 CLMRNDHPALQEEWNLGTFLKYRHIQLVTGGAGDWLLMEVLNSKQLEINKAANVSDITSA 244 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 + + Q D L+ Y + + LV P+P D LLWHK Sbjct: 245 IKLCKQSDLLMCYP---YNSVRDYIDSGELVMKPVPVDLVPGG-----LFLLWHKYFDSE 296 Query: 302 PKIVWLRETIKN 313 P WLR+ I Sbjct: 297 PSHKWLRDLIIE 308 >UniRef50_Q7W2A6 Transcriptional regulator n=3 Tax=Bordetella RepID=Q7W2A6_BORPA Length = 313 Score = 254 bits (650), Expect = 3e-66, Method: Composition-based stats. Identities = 84/318 (26%), Positives = 143/318 (44%), Gaps = 22/318 (6%) Query: 6 TTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPT 65 LDLNLL+ ++ E VT+AA+R+ ++ SAVSK LA+LR F DPLF+ + G+ PT Sbjct: 4 KHLDLNLLMIFDAILAEGHVTRAAERLAMSQSAVSKGLAQLRQAFGDPLFLRASRGVVPT 63 Query: 66 PLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQIYQRY 123 + + + + + N L R F + A + ++L L +++ + Sbjct: 64 HRALEIADQVRQAIAALNSLAGPVTEFDARSAHAHFNIGATDYVSFVLLPGLMRRLQETA 123 Query: 124 PQATIKLRNWDYDS-LDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCV 182 P ++ L + + + + G+VD+ S ++S+ I + LF D Sbjct: 124 PHVSLTLHDMESMMPEEMLLAGKVDLVISS----------VASVNFPIYRQELFRDHYVC 173 Query: 183 WLRKDHPALHQTWNLDTFLRYPHISI-CWEQSDTWALDNVLQELGRERTIAMSLPEFEQS 241 R HPAL ++ F+ H+++ + L + LQ LG R +A+ +P Sbjct: 174 LCRAGHPALADPVPIEQFVSSRHLAMPRQNGARERVLQDTLQRLGVTRDVAVQVPHMLAI 233 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 D L+ A R + + H L ++A PLP + P + LWH R + Sbjct: 234 PATLTATD-LVATMACRVAREFAARHPLQVLAHPLPLP-------DFPVSQLWHDRTRRS 285 Query: 302 PKIVWLRETIKNLYASMA 319 P WLR+T+ +L A Sbjct: 286 PSHQWLRDTVYDLARVNA 303 >UniRef50_A1U1I0 Transcriptional regulator, LysR family n=67 Tax=Proteobacteria RepID=A1U1I0_MARAV Length = 336 Score = 254 bits (648), Expect = 4e-66, Method: Composition-based stats. Identities = 73/323 (22%), Positives = 137/323 (42%), Gaps = 32/323 (9%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 I+ +DLNLL+ L +L++ER+VTKAA + +T A+S L +LR F DPL V + G+ Sbjct: 1 MDISRVDLNLLVYLDVLLRERNVTKAANHLGITQPAMSNGLRRLRDLFGDPLLVRTSEGM 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDK--PHHQTPRGLKFELAAESPLMMIMLNALSKQIY 120 + T ++ + + + + P F + A ++ + ++I Sbjct: 61 TATERARELQPLVRGILSDIEQAVQEKTPFAAGESQRVFRIMASDYAESCLMPRVLRRIR 120 Query: 121 QRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 Q P T+ + S + +G +D+ + + P+S + L+++ Sbjct: 121 QEAPHVTLDVLTPSDVSFLDVEQGRLDMAINRFDKIPQS----------FHQKTLWTEYF 170 Query: 181 CVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWA------------LDNVLQELGRE 228 + +P L + + LDT+L HI + +D L +GR+ Sbjct: 171 ACLMNARNPILKEPFTLDTYLDASHIWVSKTGFGVGVGVNPKDVQRLGWVDEALGRMGRK 230 Query: 229 RTIAMSLPEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEV 288 R I++ ++ ++ +A Q D L+AT P + + + +V +P PF+ Sbjct: 231 RQISVFTRHYQVAMLLAEQHD--LIATLPSRAAWLQKDNPNLVVKVP-PFEIP-----PF 282 Query: 289 PFTLLWHKRNSHNPKIVWLRETI 311 + W HN WLR+ I Sbjct: 283 ELKMAWSPLLQHNSDHQWLRKLI 305 >UniRef50_A4YPA1 Putative transcriptional regulator, LysR family n=1 Tax=Bradyrhizobium sp. ORS278 RepID=A4YPA1_BRASO Length = 310 Score = 254 bits (648), Expect = 4e-66, Method: Composition-based stats. Identities = 77/320 (24%), Positives = 136/320 (42%), Gaps = 21/320 (6%) Query: 2 KKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLG 61 + + +DLNLL+ + LMQ RSV++ A+R+ + + S +L +LRA DPLFV +P G Sbjct: 6 RADLRDVDLNLLVAFEALMQTRSVSRMAQRLRIGQPSASHALKRLRALLGDPLFVRTPAG 65 Query: 62 LSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGLK--FELAAESPLMMIMLNALSKQI 119 + PTP +++ + + + L PR + F + A + ++ + L + Sbjct: 66 MIPTPHALALAEPIRAILTSIERTLFARASFDPRAERRVFRIGAMDYVQAVIADPLLAVL 125 Query: 120 YQRYPQATIKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSD 178 + P + L D D+ ++ RGE+D+ + E+L+ + Sbjct: 126 QAQAPGCKLILTTTDCDTAGRSLARGEIDLAIGA----------FPQIKAGSHQELLYRE 175 Query: 179 VPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEF 238 L + +L PH+ + + LD+VL+ G +R +A+S P F Sbjct: 176 RYECVFDAKACRLGKRVTRAQWLALPHVIMSVHGDYSGPLDDVLKSSGEQREVAVSTPNF 235 Query: 239 EQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRN 298 F+ L+ A R + + +L L PLPF T++WH R Sbjct: 236 LAIPFLLRNK-RLIAALPSRMARAF--CGRLGLSTCPLPFTAPT-----FDVTMIWHART 287 Query: 299 SHNPKIVWLRETIKNLYASM 318 P WLR+ I + + Sbjct: 288 GDEPGAAWLRDQITAICRRI 307 >UniRef50_A6EYC4 LysR family regulatory protein n=1 Tax=Marinobacter algicola DG893 RepID=A6EYC4_9ALTE Length = 300 Score = 254 bits (648), Expect = 4e-66, Method: Composition-based stats. Identities = 74/320 (23%), Positives = 140/320 (43%), Gaps = 23/320 (7%) Query: 1 MKKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPL 60 MK ++ ++DLNLL +M+ +++AA + ++ A+S +L +LR DPLFV + Sbjct: 1 MKLNLRSVDLNLLPVFDAIMEAGQLSRAADSLGMSQPAISAALQRLRHTLGDPLFVRTHQ 60 Query: 61 GLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTP--RGLKFELAAESPLMMIMLNALSKQ 118 G+ PTP + ++L++ + LD + P +F + + M++L L + Sbjct: 61 GMVPTPRARELHRSLSQQLGAMRDTLDPANRFVPGTSQRRFRVLSNDYFEMVVLPTLLTR 120 Query: 119 IYQRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSD 178 + P +++ D + E D+ ++ + +VL ++ Sbjct: 121 LRSEAPNVVVEVALAGDDMPQRLYTAEADLAVDA----------FATENDRLRRQVLLAE 170 Query: 179 VPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEF 238 V RKDHP L + FL H+ + +++ LD +L E G +R + +F Sbjct: 171 RLAVVARKDHPDLWDDCSKQQFLDAEHV-VLPDRNRRLPLDQILNEPGWQRRTGARVTQF 229 Query: 239 EQSLFMAAQPDNLLLATAP-RYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKR 297 L ++ D ++AT P R Q Y + L LP P + +P LLW Sbjct: 230 ASMLATCSRSD--MIATVPERLAQQYAR--AFGLKTLPFPVEVP-----PLPVYLLWAPV 280 Query: 298 NSHNPKIVWLRETIKNLYAS 317 ++P +W R+ + ++ Sbjct: 281 MDNDPAHIWFRQRLMESVST 300 >UniRef50_Q1GMN1 Transcriptional regulator, LysR family n=1 Tax=Ruegeria sp. TM1040 RepID=Q1GMN1_SILST Length = 319 Score = 254 bits (648), Expect = 4e-66, Method: Composition-based stats. Identities = 72/321 (22%), Positives = 132/321 (41%), Gaps = 26/321 (8%) Query: 2 KKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLG 61 +K++ +DLNLL L ERSVTKAA + ++ AVS +L +LR DD LF+ S G Sbjct: 9 QKNLNAIDLNLLKVFSALAAERSVTKAANSVGLSQPAVSHALRRLRDLMDDELFIRSTDG 68 Query: 62 LSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGLK--FELAAESPLMMIMLNALSKQI 119 + PT + + ++M + P L+ + L +++ L+ ++ Sbjct: 69 MQPTERCRELAPAIDASLKMLQDAMTVKDDNDPANLRATYRLGMNDLFSTLLVPGLTARV 128 Query: 120 YQRYPQATIKLRNW------DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYE 173 ++ P +++ + D+ + RG +D+ P D E Sbjct: 129 AKQAPNVSLRFLHSMAINQNVDDAYSDLERGRIDLTVIQDFDTPSR----------FDRE 178 Query: 174 VLFSDVPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAM 233 +L + R HP +++ + HI ++ +D L ++G R I + Sbjct: 179 LLGASEFVCVARAGHPVFQPGLSMEQYTSLGHIMFTTLDAEYSRIDEALSKMGIRRRIEL 238 Query: 234 SLPEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLL 293 +P + +L A D L+ T PR + + L LPF+ +K + Sbjct: 239 RVPHYSAALSATALTD--LVYTVPRILAQHAEQA-FGLQVSELPFEAPVRK-----IFQV 290 Query: 294 WHKRNSHNPKIVWLRETIKNL 314 WHK + + WLR + ++ Sbjct: 291 WHKTRTKDFGHQWLRNVVSDV 311 >UniRef50_Q8YZV2 Transcriptional regulator n=2 Tax=Nostocaceae RepID=Q8YZV2_ANASP Length = 305 Score = 253 bits (647), Expect = 5e-66, Method: Composition-based stats. Identities = 70/316 (22%), Positives = 134/316 (42%), Gaps = 22/316 (6%) Query: 4 SITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLS 63 ++++DLNLL+ ++L +ERSVT AA+R+ + A+S +LA+LR F D LF+ + Sbjct: 5 DLSSIDLNLLVTFEVLFEERSVTAAAQRLYLGQPAMSAALARLRILFQDELFIRIGREMQ 64 Query: 64 PTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGL--KFELAAESPLMMIMLNALSKQIYQ 121 PT + + ++ +Q L+ P F + + ++L L + Q Sbjct: 65 PTAKALEISPGISVALQQIRQTLESSQTFDPTTSKHTFAIGSSDYTSYVVLPKLLEVCRQ 124 Query: 122 RYPQATIKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 P +L ++ DS+ D + + E+ + ++ PR LF + Sbjct: 125 VAPSIDFRLIGFEKDSVGDLLEQREIHVALGLFQNPPRQT----------RQMPLFEEHF 174 Query: 181 CVWLRKDHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFE 239 R+ HP + ++ +TF R P + D +D VL + +R + ++ P Sbjct: 175 VGLCRRGHPVVTQESMTPETFARLPQALFTLRRDDIGEIDKVLAQYNLQRRVVLTTPHLL 234 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 + + D L+ R + L + LP+ K ++LW K Sbjct: 235 ILPTVISSSD-LVTVIPSRLLTPFAYKDTLEIFELPV-------KTEPWMISMLWSKLTD 286 Query: 300 HNPKIVWLRETIKNLY 315 + +WLR+ +K++ Sbjct: 287 QDQASIWLRQMLKSVC 302 >UniRef50_A6VSJ2 Transcriptional regulator, LysR family n=28 Tax=Proteobacteria RepID=A6VSJ2_MARMS Length = 328 Score = 253 bits (646), Expect = 6e-66, Method: Composition-based stats. Identities = 83/317 (26%), Positives = 136/317 (42%), Gaps = 19/317 (5%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 ++ +DLNLL+ L L+ E+ V++AA+R++ + A+S +LA LRA F+DPL V L Sbjct: 21 NNLRRIDLNLLVTLHALLVEKHVSRAAQRLHKSQPAISHALANLRAIFNDPLLVRRTGKL 80 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKP-HHQTPRGLKFELAAESPLMMIMLNALSKQIYQ 121 T + L E + L+++P T F LA ++L L + + Sbjct: 81 ELTSRANELLPTLTEALHQLGALIEQPTFESTQAKRVFRLAMSDYGSRVVLPGLIQILRS 140 Query: 122 RYPQATIKLRNWDYDS-LDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 R P +++ S L + GE+D+ F S L + LF + Sbjct: 141 RAPGIDLQVIQGSRTSMLTGVYDGEIDMAFGVFN---------SPLSDELHTHTLFIEHF 191 Query: 181 CVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQ 240 K+ + +L PHI + + +++ ++N L G R IAM+LP + Sbjct: 192 ICAADKNTLPKTGSLEKTQWLSRPHILVAMQTNESNEIENALHREGVSRRIAMTLPHWGV 251 Query: 241 SLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 + M A D L+L A R + + L L P P D F+++WH R Sbjct: 252 ASHMVANTD-LILTAARRSFDLFLEDSPLQLFTPPYPID-------PFKFSMVWHSRRES 303 Query: 301 NPKIVWLRETIKNLYAS 317 + WLR TI + Sbjct: 304 DAGHNWLRHTIIEMLRE 320 >UniRef50_A9FB16 Transcriptional regulator, LysR family n=3 Tax=Sorangium cellulosum RepID=A9FB16_SORC5 Length = 349 Score = 253 bits (646), Expect = 8e-66, Method: Composition-based stats. Identities = 77/314 (24%), Positives = 136/314 (43%), Gaps = 20/314 (6%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 + ++D +L++ L L+QERSVT+AA+R+ VT ++S +L++LRA F DPL V ++ Sbjct: 43 LPSVDTHLVVALHALLQERSVTRAARRVGVTQPSMSHALSRLRAHFGDPLLVQVGRQMTL 102 Query: 65 TPLMVSMEQNLAEWMQMSNLLLDKPHHQTPR--GLKFELAAESPLMMIMLNALSKQIYQR 122 + + AE ++ + + PR F L A L +++L L++ + Sbjct: 103 SERARDLLPRAAEAVERLEQVFGQAERFDPRRSTRTFRLVATDNLELLVLPPLTRILAAE 162 Query: 123 YPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCV 182 P ++ RN D + + RGE+D +P L ++ Sbjct: 163 APHVNLRCRNIPPDFAELLRRGELDAKLGRGGP----------VPDGCRSTQLAAEQLVC 212 Query: 183 WLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 +R+ HPA + + H+ I D +D L G R + +++ F + Sbjct: 213 LMRRGHPASRKALTAARYAACEHLMISPHGEDHNVIDQELAARGLRRRVTLTVSHFLVAP 272 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 F+ + D LLL + R + +L LV P P + TL+W +R+ + Sbjct: 273 FILSGSD-LLLTVSARVAVALAR--KLDLVVRPCPLEARG-----YTLTLVWPERSEGDE 324 Query: 303 KIVWLRETIKNLYA 316 WLR I+ A Sbjct: 325 GHSWLRAAIERAVA 338 >UniRef50_Q89IY7 Transcriptional regulatory protein n=1 Tax=Bradyrhizobium japonicum RepID=Q89IY7_BRAJA Length = 307 Score = 252 bits (645), Expect = 9e-66, Method: Composition-based stats. Identities = 84/320 (26%), Positives = 138/320 (43%), Gaps = 18/320 (5%) Query: 1 MKKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPL 60 M S LDLNLL + LM E SVT+AA + +T AVS +LA+LR DPLFV S Sbjct: 1 MFVSFRALDLNLLKVFEALMTEGSVTRAASALTMTQPAVSNALARLRDALGDPLFVRSGT 60 Query: 61 GLSPTPLMVSMEQNLAEWMQMSNLLLDKP-HHQTPRGLKFELAAESPLMMIMLNALSKQI 119 G+ PT V + + + E ++ LD+ +F L+ + +++ L + Sbjct: 61 GIRPTQRAVVLWEPIGEALESVRGALDEQVFDPARAQTEFSLSMSDYVSSLVMPDLLGHL 120 Query: 120 YQRYPQATIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSD 178 + P+A + + D + VD S + + P AI L++ Sbjct: 121 GKVAPKARVHTVPNTILEIADQLEDNRVDCVMSVYVNEAQQ-------PAAIRSRSLWTV 173 Query: 179 VPCVWLRKDHPALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPE 237 ++R+ HP + + TFL H+ + + D L G R + ++ Sbjct: 174 DYACFMRRGHPLAGMKRLSTRTFLNAGHVDVSLAGKTMPSYDLFLASRGLSRNLVATVNH 233 Query: 238 FEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKR 297 + + + Q D L+A P + ++ L L A+PLP + +L WH+R Sbjct: 234 YSAAYEVVRQSD--LIAVLPSDLRSQSRHAPL-LHAMPLPLQAPPRI-----VSLFWHQR 285 Query: 298 NSHNPKIVWLRETIKNLYAS 317 N P WLRET+ ++A Sbjct: 286 NDTVPAQRWLRETLVEMFAR 305 >UniRef50_C4UEX0 Lys-R type regulatory protein n=1 Tax=Yersinia ruckeri ATCC 29473 RepID=C4UEX0_YERRU Length = 299 Score = 252 bits (645), Expect = 1e-65, Method: Composition-based stats. Identities = 76/314 (24%), Positives = 134/314 (42%), Gaps = 21/314 (6%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 S+ +DLNLL+ L +L+ ER V++AAKR+ ++ AVS +L +LR DD L V G Sbjct: 2 NSLRAIDLNLLVILDVLLSERHVSRAAKRLYMSQPAVSHALNRLRYLLDDELLVRVAGGF 61 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTP-RGLKFELAAESPLMMIMLNALSKQIYQ 121 T ++ + L E ++ ++ + + +F +A ++L L +++ Q Sbjct: 62 QLTRRAAALIEPLKEVLEKVRYIIGTGNFEPALATQRFRIALSDYGAAMVLPGLLQRLRQ 121 Query: 122 RYPQATIKLRNWDYDS-LDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 + P + + + ++ + G++D+ + LP + LF + Sbjct: 122 QAPGIDLVVEQASREQMIEQVMAGQLDLALG----------VFPDLPADMTASRLFEEHF 171 Query: 181 CVWLRKDHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFE 239 + + +P + + LD +L PH+ + ++ L ELG R +A +P F Sbjct: 172 VCVIDQANPLARKKYFTLDDYLVQPHLLVSMRGESVGEVETALAELGVRRRVAAIMPHFL 231 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 + A D LLL A R Q + L L LPF F +WH RN Sbjct: 232 LAPQALAGTD-LLLTVASRVVTI--QQESMNLQRLTLPFTVPN-----FDFVQIWHNRNH 283 Query: 300 HNPKIVWLRETIKN 313 WLR+ + Sbjct: 284 GKEDHRWLRQQVAE 297 >UniRef50_Q13YH7 Transcriptional regulator, LysR family n=12 Tax=cellular organisms RepID=Q13YH7_BURXL Length = 317 Score = 252 bits (644), Expect = 1e-65, Method: Composition-based stats. Identities = 77/321 (23%), Positives = 137/321 (42%), Gaps = 24/321 (7%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 S+ +DLNLL Q +++ERS+T+A +R+ ++ A+S SL +LR FDDPLF+ + G+ Sbjct: 13 NSLDQVDLNLLRVFQAIVEERSLTRAGERLALSQPAISYSLGRLRTLFDDPLFIRTRAGM 72 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTP--RGLKFELAAESPLMMIMLNALSKQIY 120 PTP+ + + +A + L H P F ++ + L + + ++ Sbjct: 73 QPTPIALELSAIVARALDTVREALRYAEHFDPAVSTRTFRVSLSDAGELAYLPPICEALH 132 Query: 121 QRYPQATIKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 Q+ P+ +++ + + DA+ +D L +L ++ LF + Sbjct: 133 QQAPRVRLRIEPLPVEEIEDALRASRLDFAIGN----------LPTLTARTRHQALFEET 182 Query: 180 PCVWLRK--DHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPE 237 RK P + +L FL H+ I + ALD+ + G R IA+ LP Sbjct: 183 YVCMTRKRRGLPRAKE-LSLKAFLDASHVQITSVEHSHRALDDEFRTQGVGRHIALELPH 241 Query: 238 FEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKR 297 F + A D L R Q +N+ + LP+ + T+ WH+ Sbjct: 242 FVALPSVLAVTD-LFATLPRRLAQIFNRGGNFQIYELPVTLPIAA-------VTMHWHEH 293 Query: 298 NSHNPKIVWLRETIKNLYASM 318 + VWLR + ++ Sbjct: 294 FDQDEGNVWLRNLMADIVRHF 314 >UniRef50_Q2IYM8 Transcriptional regulator, LysR family n=2 Tax=Rhodopseudomonas palustris RepID=Q2IYM8_RHOP2 Length = 317 Score = 252 bits (644), Expect = 1e-65, Method: Composition-based stats. Identities = 69/315 (21%), Positives = 131/315 (41%), Gaps = 21/315 (6%) Query: 4 SITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLS 63 ++ +DLNLL+ + +++ AA+++ ++ AVS +L +LR FDDPLFV + G+ Sbjct: 5 NLRNVDLNLLIVFDAVYATGNISHAARQLALSQPAVSNALTRLREHFDDPLFVRAGRGVK 64 Query: 64 PTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQIYQ 121 PT M + + E +++ D F + PL +++ + ++I Sbjct: 65 PTLRSQQMIEPVREALRLIRQQFDGDRSLDLGSYKRTFRIVIVDPLEAMLMPTMLREISA 124 Query: 122 RYPQATIKLR-NWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 PQ TI+ R W+ + DAI G +D+ + P Sbjct: 125 HAPQVTIESRPPWNTNVADAIIAGTLDLACYTFPVSAPGLVFKTICPCDH---------- 174 Query: 181 CVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQ 240 + R+ HP + T + +TFL +++ E +D + G R IA + + Sbjct: 175 VIVARRGHPKIGATLDAETFLSLAQVALIPELRGHTNIDRDITTRGGNRRIAYMVNKVWS 234 Query: 241 SLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 + D L+ R+ + L + P+P + ++WH++N+ Sbjct: 235 MPGVVGSTD-LVTVMPRRFAELMAPKFGLQIFESPIPISPQ-------DYHMIWHEKNTD 286 Query: 301 NPKIVWLRETIKNLY 315 +P WLR+T+ Sbjct: 287 DPGHKWLRDTMVKAM 301 >UniRef50_B0C7Y6 Transcriptional regulator, LysR family n=1 Tax=Acaryochloris marina MBIC11017 RepID=B0C7Y6_ACAM1 Length = 305 Score = 252 bits (644), Expect = 1e-65, Method: Composition-based stats. Identities = 76/315 (24%), Positives = 138/315 (43%), Gaps = 20/315 (6%) Query: 6 TTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPT 65 +DLNLL + +M E +V++AA+R+N+T AVS +L +LR +D LF+ P G+SPT Sbjct: 3 NQIDLNLLHIFEAVMMELNVSRAAERLNMTQPAVSHALRRLRRITNDELFLKVPSGVSPT 62 Query: 66 PLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGL-KFELAAESPLMMIMLNALSKQIYQRYP 124 P + + + E + L L P + + F LA + + L L + P Sbjct: 63 PKALELWGPIREGLVHIRLALSPPSFEPFSSMQTFTLAMADYSVALFLPKLLPILAHSAP 122 Query: 125 QATIKLR-NWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVW 183 I++ N + ++ + + E+D+ + + + + D Sbjct: 123 NINIRIVPNTNINAAKLLEQSEIDLAMGR----------FYRSTVRLRVQEIIGDRYICI 172 Query: 184 LRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 +RKDHP H+ L +++ H+ + T +D L+E+ R IA+++ +F Sbjct: 173 MRKDHPLAHKRLTLKQYIKADHLLVTLTGEATGLVDKQLREMDLSRRIALTVNQFTLVPE 232 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 + A D L+ A R + L + LPL K ++WH+R+ +P Sbjct: 233 LIAGSD-LISAIPLRMVERNPFRTDLHITELPL-------KIAPAFLQMMWHERSQVDPA 284 Query: 304 IVWLRETIKNLYASM 318 WLR + + + Sbjct: 285 HEWLRSQLFEIVQDL 299 >UniRef50_B2JSH4 Transcriptional regulator, LysR family n=2 Tax=Burkholderiaceae RepID=B2JSH4_BURP8 Length = 309 Score = 252 bits (643), Expect = 2e-65, Method: Composition-based stats. Identities = 62/314 (19%), Positives = 116/314 (36%), Gaps = 20/314 (6%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 + DLNLL L + + KAA+ + ++ A S +L +LR D LFV + G+ P Sbjct: 8 MDNFDLNLLRIFDALWRHGHLGKAAEELTLSQPAASYALKRLREELGDVLFVKTGSGMQP 67 Query: 65 TPLMVSMEQNLAEWMQMSNLLLDKPHHQTP--RGLKFELAAESPLMMIMLNALSKQIYQR 122 TP + + + + + K + P F +A M+ L L +++ Sbjct: 68 TPRAILLAPVVQSVLADIRERVLKAPNFVPDKAQRTFTIALSDVGEMVSLPRLLQRVTSL 127 Query: 123 YPQATIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPC 181 P + ++ L ++ R EVD+ + L Sbjct: 128 APSVNVTTVSFAPKQLLSSLQRSEVDLAIGYFPDLDGVDVF---------QQHLVRHSFV 178 Query: 182 VWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQS 241 +R++HPA+ F PH + E ++ L+E G R + P F Sbjct: 179 CLVRQNHPAVQGRLTKKLFCELPHAVVQVEGRRQEIVEQFLKENGIRRREVLHTPHFLSI 238 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 A D L++ + + + ++ +L ++ P K WH+ + Sbjct: 239 PMTIAMTD-LVVTVSSDVGEIFARIAELEILDPP-------YKMPRFDVNQYWHRSQHDD 290 Query: 302 PKIVWLRETIKNLY 315 P W+R ++ L+ Sbjct: 291 PGNRWMRGLVRELF 304 >UniRef50_A8V9B9 LysR-like regulatory protein n=2 Tax=Betaproteobacteria RepID=A8V9B9_9BURK Length = 308 Score = 251 bits (642), Expect = 2e-65, Method: Composition-based stats. Identities = 65/311 (20%), Positives = 127/311 (40%), Gaps = 20/311 (6%) Query: 7 TLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTP 66 +D+ LL + SVT+AA+ + ++ +S +L+KLR + DPLFV + G+ TP Sbjct: 3 EIDVKLLNVFAETYRTSSVTQAAENLGLSQPTISFNLSKLRDHYKDPLFVRTSRGMEATP 62 Query: 67 LMVSMEQNLAEWMQMSNLL--LDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYP 124 + + + + + + + L + F +A +++L L ++ P Sbjct: 63 FAQELYEQVVDLLASFSNIARLQTSFDPSEAQRIFRIAMTDISQIVLLPTLLNKLRIVAP 122 Query: 125 QATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 +A +++ + ++ + GEV++ + L + LF V Sbjct: 123 RAQLRISHITTETPRMLESGEVELAVG----------FMPQLDAGFYQQKLFPQRFVVLA 172 Query: 185 RKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 H AL + +L+ +L H+++ + +D L+E R + + +P + + Sbjct: 173 ASRHVALGDSMSLEYYLSAGHVTVTPSGTGHSIIDRTLREQQLHRHVVLDVPNYLAIADI 232 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 AQ D LLAT P+ + P+PF+ Q WH R + Sbjct: 233 VAQTD--LLATVPQKLADL-MSSSVDARRYPVPFEIPQ-----YDVKQHWHARTHQDAGH 284 Query: 305 VWLRETIKNLY 315 WLR + L+ Sbjct: 285 RWLRALLAELF 295 >UniRef50_B0BQD1 HTH-type transcriptional activator n=15 Tax=Proteobacteria RepID=B0BQD1_ACTPJ Length = 299 Score = 251 bits (641), Expect = 2e-65, Method: Composition-based stats. Identities = 75/314 (23%), Positives = 132/314 (42%), Gaps = 24/314 (7%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 + I T+DLNLL L+QER+VTKAA+R++VT A+S L +LR F DPLFV G+ Sbjct: 2 RDIRTVDLNLLKAFDALLQERNVTKAAQRLSVTQPAMSAMLNRLRDSFGDPLFVRVQHGI 61 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDK-PHHQTPRGLKFELAAESPLMMIMLNALSKQIYQ 121 PT +++ ++ + N +L + ++A+ + + + Q Sbjct: 62 EPTARALALMPSVKTVLAEVNRMLRPVEFDPQTAEMTIKIASTDYGLEAIGTPFLSHLKQ 121 Query: 122 RYPQATIKLRN-WDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 P+ + D D L + +DI + +P + + L ++ Sbjct: 122 LAPKIRVAFLPAQDVDLLAQFEQARIDIALVSTQH----------IPADLHSKPLLTEHY 171 Query: 181 CVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWAL-DNVLQELGRERTIAMSLPEFE 239 +R DHP +Q NLD F + ++ + + D L +LG+ R +++S+ F Sbjct: 172 VCVMRADHPMANQLLNLDNFCELDFAMMSYDGGQFYGVCDEALAKLGKTRRVSVSVNHFS 231 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 + D ++A P ++ L L LPL + WH+R Sbjct: 232 LLPNILRTTD--VVALIPSRLSHH--LTGLICKTLPLEV-------QGFSLQMAWHERTH 280 Query: 300 HNPKIVWLRETIKN 313 +P W+R + Sbjct: 281 QDPAYQWIRNLLVE 294 >UniRef50_B9Z7Z3 Transcriptional regulator, LysR family n=3 Tax=Proteobacteria RepID=B9Z7Z3_9NEIS Length = 324 Score = 250 bits (640), Expect = 3e-65, Method: Composition-based stats. Identities = 79/317 (24%), Positives = 138/317 (43%), Gaps = 25/317 (7%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 ++T D NLL+ L +L+ E SV +AA+R+ ++PSA+S++LA+LR DPL V + GL P Sbjct: 1 MSTPDFNLLVTLDVLLAEGSVARAARRLRLSPSAMSRALARLRETTGDPLLVRAGRGLVP 60 Query: 65 TPLMVSMEQNLAEWMQMSNLLLDKPH--HQTPRGLKFELAAESPLMMIMLNALSKQIYQR 122 TP + + + +++ +Q + +L T F L + +L ++ + Sbjct: 61 TPRALELREQVSQLVQDAAAVLRPAEKLDLTQLVRTFTLRVGDGFVENFGPSLIARVGEA 120 Query: 123 YPQATIKLRNWDYDSLDAITRGEVDI--GFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 P ++ + G VD+ G G + P R LF D Sbjct: 121 APGVRLRFMPKSNKDTAPLRDGSVDLDTGVVGEGTGPEVR-----------VRALFQDRF 169 Query: 181 CVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQ 240 +R+ HP + H+ + +D +D L+ +G ER I + F Sbjct: 170 IGVVRQGHPLCQGEITPARYAAGRHVLVSRRGTDKGPVDETLRAIGLEREIMTIVGGFAP 229 Query: 241 SLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 +L +A D L+AT P + + + + + LPF E+ +LLWH R Sbjct: 230 ALALARATD--LVATVP---ERHTGTLRDGMHSFALPFPAP-----EITVSLLWHPRMDA 279 Query: 301 NPKIVWLRETIKNLYAS 317 + WLR ++ + A+ Sbjct: 280 DLAHRWLRGCVREICAA 296 >UniRef50_D1RUJ7 Transcriptional regulatory protein n=1 Tax=Serratia odorifera 4Rx13 RepID=D1RUJ7_SEROD Length = 313 Score = 250 bits (640), Expect = 4e-65, Method: Composition-based stats. Identities = 60/318 (18%), Positives = 128/318 (40%), Gaps = 19/318 (5%) Query: 1 MKKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPL 60 M+ L +N+L L ++ R+++ AA+++N + +S+ LA+LR F DPL V Sbjct: 1 MRTQFAALSINMLQVLHAVLTTRNLSHAAEKLNSSQPQLSRQLAQLREAFGDPLLVRHGR 60 Query: 61 GLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGLK-FELAAESPLMMIMLNALSKQI 119 +P + L + + L KP + + F A+ + ML L + Sbjct: 61 EYVLSPRGQEIILPLEKLINELKELSQKPEFEPLLCSRCFRFASSDYVAEHMLPQLVDYL 120 Query: 120 YQRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 P+ +++ W + + E+D+ ++ P + +L DV Sbjct: 121 QTVAPKVSVEYFTWKPNDYPLLANAELDLA----------TTMIKEAPSGLRGRILGEDV 170 Query: 180 PCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFE 239 P + H + + + H+ + +D L+E G R +A+++P F Sbjct: 171 PVCVMSARHVLAGKALEAKDYASWRHVRVSGGGDKDSFIDRELKEYGIYRQVALTVPFFS 230 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 ++ + + + LL T P++ + + + F + + + ++WH+R Sbjct: 231 AAMEVVSSSN--LLVTIPKHIAIM-MAGKYNVTWCSIDFVKESHR-----YWMIWHERTH 282 Query: 300 HNPKIVWLRETIKNLYAS 317 P+ W R ++ + A Sbjct: 283 MAPEHKWFRNVVREIVAG 300 >UniRef50_A9AQZ4 Transcriptional regulator, LysR family n=24 Tax=Burkholderiaceae RepID=A9AQZ4_BURM1 Length = 327 Score = 250 bits (639), Expect = 5e-65, Method: Composition-based stats. Identities = 72/317 (22%), Positives = 130/317 (41%), Gaps = 22/317 (6%) Query: 4 SITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLS 63 ++ LDLNL+ L L R+V++A + + V+ VS +L +LRA+F DPLFV + G+ Sbjct: 19 AMDALDLNLIPYLVALDDTRNVSRAGELLGVSQPRVSTALGRLRAYFGDPLFVRTSRGME 78 Query: 64 PTPLMVSMEQNLAEWMQMSNLLLDKPHHQTP--RGLKFELAAESPLMMIMLNALSKQIYQ 121 PTP +++ + + L PH P F +A ++ L L + Q Sbjct: 79 PTPRALALLPAARDALAQIERGLVAPHDFDPAASTHTFSIALSDVGEIVFLPKLLQAFAQ 138 Query: 122 RYPQATIKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 P A ++ + +D + + G +D+ + + LF+ Sbjct: 139 CAPHANLRSVSLPHDEVGRGLEAGSIDLAVGYFPDLDGN---------NFFQQRLFTHRF 189 Query: 181 CVWLRKDHPALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFE 239 +R+ HP + + ++ FL H + E L+ L + +R + P F Sbjct: 190 VCLMRRGHPLEQARPFTVEQFLESGHAVVRAEGRSQEVLEKYLAKQRMQRRAVLETPHFM 249 Query: 240 QSLFMAAQPDNLLLATAPRYCQY-YNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRN 298 F+ ++ D L+AT P Y Y H + E WH++ Sbjct: 250 SLPFILSRTD--LIATVPHAIGYAYAAEHAF------IVPVEPPLPLPRFDLKQHWHRKF 301 Query: 299 SHNPKIVWLRETIKNLY 315 ++P+ WLR + +L+ Sbjct: 302 HNDPRTAWLRGVVASLF 318 >UniRef50_A6FYP7 Transcriptional regulator, LysR family protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6FYP7_9DELT Length = 312 Score = 250 bits (638), Expect = 5e-65, Method: Composition-based stats. Identities = 88/314 (28%), Positives = 134/314 (42%), Gaps = 18/314 (5%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 + LDLNLL+ +L +ERSVT+AA R+ VT SA+S +L +LR +D L V + G+ Sbjct: 7 DELAQLDLNLLVAFDVLAEERSVTRAAARLGVTQSAMSHTLRRLRGVLEDELLVRTRGGM 66 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQIY 120 + TP ++ + + L P P F L ++ L L Sbjct: 67 ALTPRAAALVAPVRTGLTTLQRALADPEGFDPATSERHFRLTGPDLFELLYLPRLIAGFG 126 Query: 121 QRYPQATIKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 + ++ L + L D + GE+D+ + R R + L VL D Sbjct: 127 ASAGRLSVTLAHVAPRQLADQLETGELDLAITARMLDGREQPAQPGL----MRRVLLRDG 182 Query: 180 PCVWLRKDHPAL--HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPE 237 ++R HPAL +L FL H+ + +D VL E +RT+A+ + Sbjct: 183 WRCFVRAGHPALTKRGRLSLPRFLAASHVMVSPTGRGQGIVDVVLAEQDEQRTVAVRVSS 242 Query: 238 FEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKR 297 F + +AA D L+ TAP + L VA PLP E + WH+R Sbjct: 243 FATAPVVAASSD--LILTAPASLEAVVGHLGLVCVAPPLPLP-------EHSVDMTWHQR 293 Query: 298 NSHNPKIVWLRETI 311 S +P WLRE + Sbjct: 294 LSEDPGHQWLREQL 307 >UniRef50_Q08NF6 Transcriptional Regulator, LysR family n=1 Tax=Stigmatella aurantiaca DW4/3-1 RepID=Q08NF6_STIAU Length = 322 Score = 250 bits (638), Expect = 6e-65, Method: Composition-based stats. Identities = 76/317 (23%), Positives = 139/317 (43%), Gaps = 21/317 (6%) Query: 4 SITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLS 63 ++++D NLL+ L L+QE V +A+KR+ ++PSA S +LA+LR D L V + L Sbjct: 14 QLSSIDTNLLVVLDALLQEGHVGRASKRVALSPSATSHALARLRELLGDELLVRAGRQLV 73 Query: 64 PTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGL--KFELAAESPLMMIMLNALSKQIYQ 121 TP +++ + + M+ +L P L F + + ++L L + + Sbjct: 74 LTPRAIALAPQVRQLMEQMERILRPAESFHPAKLEHTFRVLTTDHIEFVLLRPLDRFLTD 133 Query: 122 RYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPC 181 P+ + R D+++ + G D+ F + + LP I + LF D Sbjct: 134 EAPRVILHNRPMVPDAVEELRGGRADLAFG----------VFTDLPDDISSQELFKDRFV 183 Query: 182 VWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQS 241 +R+ HP L + L F H+ + + T +D +L E +R + +L F + Sbjct: 184 TLVREGHPVLARPLTLKRFAELDHVLVAPRGTATSRMDLLLAERNLKRRVVRTLGSFLSA 243 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 F AQ D+ + + R L L ++ P+ + E T +WH+R + Sbjct: 244 PFFVAQSDH-AVTLSARIADALAPLLGLRVLEPPIAY--------EYTLTQIWHRRWDAD 294 Query: 302 PKIVWLRETIKNLYASM 318 P WLR+ + + + Sbjct: 295 PAHAWLRQLTARVASGL 311 >UniRef50_B7CP85 Transcriptional regulator, LysR family protein n=1 Tax=Burkholderia pseudomallei 576 RepID=B7CP85_BURPS Length = 305 Score = 249 bits (637), Expect = 8e-65, Method: Composition-based stats. Identities = 76/314 (24%), Positives = 132/314 (42%), Gaps = 20/314 (6%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 K I DLNLLL +L++ER V+KAA R +++ A+S+ L +LR F D L V + G Sbjct: 4 KHIRGADLNLLLAAFVLLEERQVSKAADRYHLSQPAMSRMLQRLRDTFGDELLVRTRGGF 63 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLL-DKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQ 121 PT + L E + + LL T F +A I+ L +++++ Sbjct: 64 EPTVRGRYILHELGELLPRLDALLRGGLFDPTEAEDTFRVACTDYATTILGPRLFERVFR 123 Query: 122 RYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPC 181 P ++ + W + +AI G +D+ E +P + E LF D Sbjct: 124 EAPNVSMDVVAWHDHAFEAIEHGRLDLVLWPNE-----------VPDTLYSETLFEDDFV 172 Query: 182 VWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQS 241 + DHP+ L +LR+PH + ++ L ++G R + + F + Sbjct: 173 CMMSSDHPSGDGPLVLRDYLRFPHAVVSVLGGKQTIVEQRLHDMGVRRAAGLRVSYFSGA 232 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 + A+ L+ R Y + +V P F ++ + ++WH R + Sbjct: 233 ITAIART-ALIATVPRRLAMLYRDRANIRIVEAPAMF-------GKLSYKMVWHPRADGD 284 Query: 302 PKIVWLRETIKNLY 315 + WLR+TI+ Sbjct: 285 LALQWLRQTIRAAA 298 >UniRef50_Q4KHX1 Transcriptional regulator, LysR family n=1 Tax=Pseudomonas fluorescens Pf-5 RepID=Q4KHX1_PSEF5 Length = 308 Score = 249 bits (636), Expect = 1e-64, Method: Composition-based stats. Identities = 80/318 (25%), Positives = 140/318 (44%), Gaps = 21/318 (6%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 + +DLNLL+ L L+ E+ VT+ A R++++ A+S SL+KLR DDP+ + L Sbjct: 6 LRNIDLNLLVVLDALLTEKHVTRTALRLHLSQPAISHSLSKLRGLLDDPILIRRGSELVL 65 Query: 65 TPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQIYQR 122 + L +++Q L E + L K P F LA ++L L ++ + Sbjct: 66 SSLAQNIQQPLREILGQIETLFGKSIDFDPASSQRIFTLAMSDYGAALVLPNLMVRLRRD 125 Query: 123 YPQATIKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPC 181 P T+ + + +++G++D+ + +L I EVLF + Sbjct: 126 APNTTLVVTQDTRHGMFEQVSQGKIDLALG----------VFPNLSGDISTEVLFEETFS 175 Query: 182 VWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQS 241 L + T +LD++L PHI + + S +D++L++ G +R IA+S+P + + Sbjct: 176 CLLDRRTLPADGTLDLDSYLARPHILVSMDGSANGEVDSLLRDEGLQRRIAVSVPHWRTA 235 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 M D +L + + L PF +WH+R + Sbjct: 236 PSMIHNTDLILTVATRTLDEALLNQDLIQLR--------PPLPIPPFPFVQIWHQRFDNE 287 Query: 302 PKIVWLRETIKNLYASMA 319 P VWLRE +K + A A Sbjct: 288 PAHVWLREQVKQVVAHSA 305 >UniRef50_C5CVL6 Transcriptional regulator, LysR family n=5 Tax=cellular organisms RepID=C5CVL6_VARPS Length = 327 Score = 249 bits (636), Expect = 1e-64, Method: Composition-based stats. Identities = 83/319 (26%), Positives = 139/319 (43%), Gaps = 23/319 (7%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 +DL+L+ L ++ +RSV++AA R+ + AVS +L +LR DPL V S G+ P Sbjct: 7 FDKIDLHLIRVLHTVLTDRSVSRAAIRLGMYQPAVSAALKRLRELSGDPLLVRSGSGMVP 66 Query: 65 TPLMVSMEQNLAEWMQMSNLLLDKPHHQTP--RGLKFELAAESPLMMIMLNALSKQIYQR 122 T + M + A ++ + +L P F +AA + + L L + + Sbjct: 67 TDAGLRMIEPAASILRAAEMLFSDARGFEPQSAATTFRIAASDYMDPLFLPMLVAHVKRE 126 Query: 123 YPQATIKLRNWDYDS--LDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 P I++ DS + G+VD+ P + LF D Sbjct: 127 APLCQIEIHALTPDSDYHGHLALGQVDLVIGNWLKPPEDLHMAR----------LFGDEV 176 Query: 181 CVWLRKDHPALHQTWNLDTFLRYPHISICW-EQSDTWALDNVLQELGRERTIAMSLPEFE 239 + +DHPA+ + W+L+T+L HI+ +D +L ELGR+R I F Sbjct: 177 VSLVNQDHPAVRRGWDLETWLAAEHIAPTPMHPGGRGIIDQMLDELGRQRNITARCAHFS 236 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 M A L+L T +YC+ + + ++ P+ + + LWH+R Sbjct: 237 LIPDMVASS-LLVLTTGRQYCERFAARLPVKILECPVALP-------RLMYYQLWHERTH 288 Query: 300 HNPKIVWLRETIKNLYASM 318 + WLRE IK++ AS+ Sbjct: 289 SSSSARWLRECIKDVAASL 307 >UniRef50_Q1XGL2 Transcriptional activator NahR n=3 Tax=root RepID=Q1XGL2_PSEPU Length = 374 Score = 249 bits (636), Expect = 1e-64, Method: Composition-based stats. Identities = 73/296 (24%), Positives = 115/296 (38%), Gaps = 21/296 (7%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 + LDLNLL+ L+ +R V+ A+ + +T AVS +L +LR DPLFV + G+ P Sbjct: 3 LRDLDLNLLVVFNQLLVDRRVSITAENLGLTQPAVSNALKRLRTSLQDPLFVRTHQGMEP 62 Query: 65 TPLMVSMEQNLAEWMQMSNLLLDKPHHQTP--RGLKFELAAESPLMMIMLNALSKQIYQR 122 TP + + + M L P F LA + + L + + Sbjct: 63 TPYAAHLAEPVTSAMHALRNALQHHESFDPLTSERTFTLAMTDIGEIYFMPRLMDVLAHQ 122 Query: 123 YPQATIK-LRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPC 181 P I +R+ + A+ G VD+ LL +L L + Sbjct: 123 APNCVISTVRDSSMSLMQALQNGTVDLAVG----------LLPNLQTGFFQRRLLQNHYV 172 Query: 182 VWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQS 241 RKDHP + L+ F Y H+ + + +D + +G R I + +P F Sbjct: 173 CLCRKDHPVTREPLTLERFCSYGHVRVIAAGTGHGEVDTYMTRVGIRRDIRLEVPHFAAV 232 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKR 297 + + D LLAT P + L ALP P E+ + WH + Sbjct: 233 GHILQRTD--LLATVPIRLADCC-VEPFGLSALPHPVVLP-----EIAINMFWHAK 280 >UniRef50_B6JAE3 MexT protein n=1 Tax=Oligotropha carboxidovorans OM5 RepID=B6JAE3_OLICO Length = 311 Score = 249 bits (636), Expect = 1e-64, Method: Composition-based stats. Identities = 73/320 (22%), Positives = 140/320 (43%), Gaps = 24/320 (7%) Query: 2 KKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLG 61 +K++ LDLNLL+ + RS T AA +++++ AVS +L++LR DPLFV Sbjct: 11 QKNLARLDLNLLVVFDAIASARSTTLAATQLSLSQPAVSHALSRLRRLIGDPLFVRGRGR 70 Query: 62 LSPTPLMVSMEQNLAEWMQMSNLLL-DKPHHQTPRGLKFELAAESPLMMIMLNALSKQIY 120 TP M + + + ++L + P F +AA M+ ++ L + ++ Sbjct: 71 FVLTPRAEGMVLQVRDILNAVGVVLANAPFDPAENERTFRIAASDYTMLTIMPTLVRTLH 130 Query: 121 QRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 + P+A +++ + ++ + ++D F + + LF + Sbjct: 131 RASPRAKLEVFSVGSQTIAQLESNDLDCTFWALKPPGAPYVTMP----------LFRESS 180 Query: 181 CVWLRKDHPALH----QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLP 236 +L + HP LD ++ YPH+ + S+ +D L +GR+RTI ++ Sbjct: 181 KGFLDRRHPLAKPANRGRLTLDDYVGYPHVIAKFRDSNPSPVDVALAAVGRKRTIGLASS 240 Query: 237 EFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHK 296 F + A L+AT P + + L LP+ + + ++L+WH+ Sbjct: 241 SFIG--NITALSGTNLIATLPSRLSSIAESYGLKSFDLPIRIE-------DYTYSLVWHQ 291 Query: 297 RNSHNPKIVWLRETIKNLYA 316 R +P +WLR+ I + Sbjct: 292 RTDADPACIWLRKVIAQTIS 311 >UniRef50_Q393U0 Transcriptional regulator, LysR family n=6 Tax=Burkholderiales RepID=Q393U0_BURS3 Length = 310 Score = 249 bits (636), Expect = 1e-64, Method: Composition-based stats. Identities = 76/319 (23%), Positives = 143/319 (44%), Gaps = 22/319 (6%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 ++ ++DLNLL+ L L+ E+ VT+AA ++ ++ SA+S +L +LR D L + + G+ Sbjct: 1 MNLRSVDLNLLVALDALLTEKHVTRAATKVGLSQSAMSSALGRLRILMRDELLIRNATGM 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGL--KFELAAESPLMMIMLNALSKQIY 120 PTP + +E+ L + + + LL+ P F L L +++ L Q+ Sbjct: 61 EPTPRALELEEPLRQLLHQAERLLESDGAFDPATTAGHFRLRMSDVLEYLLMPPLLAQLE 120 Query: 121 QRYPQATIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 Q P T+ + + ++ A+ ++D+ S H + + + LF D Sbjct: 121 QEAPGVTLDVVHLSPGQTVTALEADDIDVAVSMDLEHAGAVQAMP----------LFDDR 170 Query: 180 PCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFE 239 + +DHP + LD FL PH+ + +D +D L + R R + +++P + Sbjct: 171 MVCVMARDHPCAAEALTLDLFLSLPHLKVSISSTDGRYVDAKLAGMRRARNVVLNVPHWL 230 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 + + + +A R + + L L ALP + +++ WH+R+ Sbjct: 231 VVPHLLRHSSMVAVMSA-RLAERFAA-DGLVLKALPF-------ESAGFHWSMYWHRRHD 281 Query: 300 HNPKIVWLRETIKNLYASM 318 P WLRE I+ M Sbjct: 282 SVPAQAWLREKIREAAEPM 300 >UniRef50_C7RKX8 Transcriptional regulator, LysR family n=20 Tax=Proteobacteria RepID=C7RKX8_9PROT Length = 310 Score = 249 bits (635), Expect = 1e-64, Method: Composition-based stats. Identities = 79/317 (24%), Positives = 134/317 (42%), Gaps = 25/317 (7%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 ++T DLNLL+ L +L+ E SV +AA+R+ ++PSA+S++LA+LRA DPL V + GL P Sbjct: 1 MSTADLNLLVTLDVLLAEGSVARAAQRLRLSPSAMSRALARLRATTGDPLLVRAGRGLVP 60 Query: 65 TPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQIYQR 122 TP + + + + +Q + L + L + L ++ ++ Sbjct: 61 TPRALELREQVGPLVQAAEAALRPVEKLDLERLVRMYTLRTSEGFVENFGPDLIARVAEQ 120 Query: 123 YPQATIKLRNWDYDSLDAITRGEVDI--GFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 P + + + G VD+ G G+ + P R + LF D Sbjct: 121 APGVRLCFVQKSNKNSAPLRDGSVDLETGVVGKATAPELR-----------VQALFRDRF 169 Query: 181 CVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQ 240 +R HP + HI + D +D L+ LG ER I + F Sbjct: 170 IGVVRMGHPLSQGEMTPHRYATGKHILVSRRGFDRGMIDEALKPLGLERQIVTIVSGFST 229 Query: 241 SLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 +L +A D L+A+ P + + + + + PLP E+ +L WH R Sbjct: 230 ALVLARASD--LIASVP---ERHTAKLRAGMHSFPLPIATP-----EITVSLHWHPRMDA 279 Query: 301 NPKIVWLRETIKNLYAS 317 +P WLR ++ + Sbjct: 280 DPAHRWLRGCVREVCGE 296 >UniRef50_A3Y808 Transcriptional regulator, LysR family protien n=1 Tax=Marinomonas sp. MED121 RepID=A3Y808_9GAMM Length = 301 Score = 248 bits (634), Expect = 2e-64, Method: Composition-based stats. Identities = 72/316 (22%), Positives = 131/316 (41%), Gaps = 21/316 (6%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 + +DLNLL+ L + +SV+ AA + ++ SA S +A+LR F+D LFV + Sbjct: 1 MDLHQIDLNLLILFDALYRHQSVSLAADEVCISQSAFSHGIARLRKRFNDELFVRVNNQM 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPR--GLKFELAAESPLMMIMLNALSKQIY 120 PTP + Q+L + + + ++ H +F+++A +L L Q+ Sbjct: 61 QPTPRAEEIAQHLHQALPFIHNAINDSDHFDASMDKTEFKISATDYTEFSLLPKLVGQVS 120 Query: 121 QRYPQATIKLRNWD-YDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 + P + + L + EVD S + ++ SD Sbjct: 121 HQAPNIKLTVIGAKAPQPLTHLENNEVDFALGFSHEIEASSLI--------EHHTWLSDS 172 Query: 180 PCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFE 239 C RK+HPAL Q +LDTFL H+ + +D VL + +R +++ LP Sbjct: 173 YCTVARKNHPALTQGLDLDTFLELKHVRVSPWGEKQGIVDQVLAQHKLKRHVSLQLPSVL 232 Query: 240 QSLFMAAQPDNLLLATAPRY-CQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRN 298 + D L+ T PR + + ++ + P+ + + WHK N Sbjct: 233 VAPHSIIHSD--LILTMPRIVAEQVAKQVEIEIFTPPISIP-------DYHLNIYWHKIN 283 Query: 299 SHNPKIVWLRETIKNL 314 + W+++ ++L Sbjct: 284 ADKASFKWMKQLFQSL 299 >UniRef50_Q3JR86 LysR-family regultor n=70 Tax=Proteobacteria RepID=Q3JR86_BURP1 Length = 508 Score = 248 bits (633), Expect = 2e-64, Method: Composition-based stats. Identities = 74/324 (22%), Positives = 136/324 (41%), Gaps = 24/324 (7%) Query: 1 MKKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPL 60 M + +D LL L L+ ERSVT+AA ++N + A+S +L +LR DPL V Sbjct: 200 MSQQREAIDTYLLRVLHTLLMERSVTRAAVKLNQSQPAISAALRRLRDITGDPLLVRGKS 259 Query: 61 GLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQ 118 G+ PT + + + + ++ + + H+ P + + L ++ + + ++ Sbjct: 260 GMVPTEYGLRLLEPVQNALREIERIKFQQHNFDPATSIRCYRIGCPDYLNVLFVPTVVER 319 Query: 119 IYQRYPQATIKLRNWDY--DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLF 176 Q P AT++ + D A+ G++DI P L + LF Sbjct: 320 FRQAAPNATLEFHSLGPAFDYELALEDGKLDIVVGNWPEPPEQLHLSN----------LF 369 Query: 177 SDVPCVWLRKDHPALH-QTWNLDTFLRYPHISICW-EQSDTWALDNVLQELGRERTIAMS 234 D + HP LD +L PH++ A+D L +R + ++ Sbjct: 370 VDEIVCLMSNSHPFAKRGGLTLDQYLNAPHLAPTPYSVGQRGAIDVHLARERLKRHVVVT 429 Query: 235 LPEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLW 294 LP F + ++ + D L+ T + +Y + L +V PL F Q + LW Sbjct: 430 LPYFNLAPYVLVKSD-LIFTTTRLFADHYAKFLPLSVVPAPLDFPPMQ-------YYQLW 481 Query: 295 HKRNSHNPKIVWLRETIKNLYASM 318 H+R ++ ++ WLR + ++ Sbjct: 482 HERCHYSDEVRWLRGLVAEATRTL 505 >UniRef50_A9AQX4 Transcriptional regulator, LysR family n=20 Tax=Proteobacteria RepID=A9AQX4_BURM1 Length = 315 Score = 248 bits (633), Expect = 2e-64, Method: Composition-based stats. Identities = 76/318 (23%), Positives = 134/318 (42%), Gaps = 25/318 (7%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 ++ +DLNL + + +R++T+AA+ +N+T AVS +LA++R +DPLFV++P G+ P Sbjct: 20 LSKIDLNLFVVFDAIYNKRNLTRAAELLNLTQPAVSNALARMRKTLNDPLFVSTPAGMMP 79 Query: 65 TPLMVSMEQNLAEWMQMSNLLLDKPHHQTP--RGLKFELAAESPLMMIMLNALSKQIYQR 122 TP ++ + E +Q+ + + + P F L+ ++L AL + + ++ Sbjct: 80 TPFAENIVGRVREALQLLDSSVHEGDVFDPASSERVFRLSMSDLTEALLLPALGELLQRQ 139 Query: 123 YPQATIKLRNWDYDSLD-AITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPC 181 P ++ D + A+ G VDI + L D Sbjct: 140 APGMHVRSYTMDRREIATALANGTVDIAIDAPLLG----------DPHLHQAPLVRDRYA 189 Query: 182 VWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQS 241 +R HP T +D +L HI + + + +D L LG R I M + + + Sbjct: 190 CMIRDGHPFKGDTLTMDDYLAMGHIHVSSRRKGSGHVDAELTRLGLRRNIQMRVQHYMVA 249 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 +A + D L A L + P L LPF+ + + WH+ + Sbjct: 250 PLIAMRGDLALTAPLR-------LLQRYPARILELPFEMPG-----LEYFCYWHRSADQD 297 Query: 302 PKIVWLRETIKNLYASMA 319 WLRE + L M Sbjct: 298 QANRWLRERLAELMRDMG 315 >UniRef50_Q13GK2 Transcriptional regulator, LysR family n=1 Tax=Burkholderia xenovorans LB400 RepID=Q13GK2_BURXL Length = 311 Score = 248 bits (633), Expect = 3e-64, Method: Composition-based stats. Identities = 82/319 (25%), Positives = 135/319 (42%), Gaps = 24/319 (7%) Query: 1 MKKS--ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNS 58 M+++ + TLD+ LLL L++ERSV++AA + +T SAVS+ L +LR F DPLF+ + Sbjct: 1 MRRNPRVDTLDIKLLLVFDALLRERSVSRAADDVGLTQSAVSQKLGRLRDIFSDPLFIRT 60 Query: 59 PLGLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALS 116 G+ PTP + + LAE + L+ P F +A + L + Sbjct: 61 ANGMEPTPHALVLSAQLAELLARWKSLVSSQQRFEPATAERNFRVALSDGMSYHCLPPVV 120 Query: 117 KQIYQRYPQATIKLRNWDYDSLDA-ITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVL 175 ++I + P I + + I G D+ + P+ I L Sbjct: 121 RRIREIAPNLRITIVHVGPRGGQREIESGSADLALG----------VFQQPPIGISTCEL 170 Query: 176 FSDVPCVWLRKDHPALHQ-TWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMS 234 F K++P L Q T + D +L HI++ ++ +++ LG +R IA+ Sbjct: 171 FRYTLQCVADKNNPRLKQGTMSRDEYLEASHIAVGENNVPGTLVEVIVEALGLKRKIALV 230 Query: 235 LPEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLW 294 P F + D L+ T P Q L P+PF S+ + +W Sbjct: 231 TPHFVSIPNLVLGTD--LIGTFPSSAQD-AYPFSNQLCFFPIPFPISESIAMA-----MW 282 Query: 295 HKRNSHNPKIVWLRETIKN 313 H R +P +WLR + Sbjct: 283 HPRFDGDPGHMWLRNLFAD 301 >UniRef50_A9CLK9 Transcriptional regulator, LysR family n=2 Tax=Alphaproteobacteria RepID=A9CLK9_AGRT5 Length = 325 Score = 247 bits (632), Expect = 3e-64, Method: Composition-based stats. Identities = 85/317 (26%), Positives = 139/317 (43%), Gaps = 22/317 (6%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 ++ +DLNLL+ L ER+VT+A RI T A+S +L++LR D LFV P GL Sbjct: 8 MNLHGIDLNLLVAFDALNSERNVTRAGSRIGRTQPAMSAALSRLRFLLRDELFVRGPNGL 67 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTP--RGLKFELAAESPLMMIMLNALSKQIY 120 PTP V + + ++ ++ L P + F +A + ++L L + Sbjct: 68 QPTPRAVELAEPISLALREIQRTLQFTQGFDPDKSTISFSIAVSAHAGSVILPRLLSLLE 127 Query: 121 QRYPQATIKLRNWDY--DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSD 178 ++ P IK+R++ D++ + G VD+ P SR L + LF + Sbjct: 128 EKAPGIDIKVRDYSSRDDAVSLLDSGGVDLTVGI-PPTPTSRILSA---------RLFQE 177 Query: 179 VPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEF 238 LRKDHP L + ++ +TFL HI + + D L R A+++P Sbjct: 178 RFVCILRKDHPILGRPFDPETFLSLTHILVAPDNEGLDVADAALASKNFRRRAAVTIPHM 237 Query: 239 EQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRN 298 + + A D ++ + +L + PLP + VPF L WH+RN Sbjct: 238 HVAPALVASSD-MVATVIESVVAHSGFAERLAVFDFPLPLN-------PVPFVLSWHRRN 289 Query: 299 SHNPKIVWLRETIKNLY 315 +P WLR + + Sbjct: 290 DGHPAQQWLRNGLLAAF 306 >UniRef50_Q46YJ7 Transcriptional regulator, LysR family n=5 Tax=cellular organisms RepID=Q46YJ7_RALEJ Length = 394 Score = 247 bits (632), Expect = 3e-64, Method: Composition-based stats. Identities = 73/318 (22%), Positives = 128/318 (40%), Gaps = 23/318 (7%) Query: 6 TTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPT 65 LD LL L L+ E+SVT+ A R+ + A+S +L +LR D + V G+ PT Sbjct: 84 DHLDTYLLRVLHTLLTEQSVTRTAVRLGQSQPAISNTLKRLREITGDAILVRGKSGMVPT 143 Query: 66 PLMVSMEQNLAEWMQMSNLLLDKPHHQTPR--GLKFELAAESPLMMIMLNALSKQIYQRY 123 + + + + + + P P F L A L L + +++ + Sbjct: 144 ERGRELLELAEQSLAAMDRIARPPQQFDPATTTRTFHLGAPDYLDAFFLPNIVERVRRLA 203 Query: 124 PQATIKLRNW--DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPC 181 P A + + D L+ + +G++DI S P + LF D Sbjct: 204 PGAKLFVHPMTSSSDFLEDLEQGQLDIVIGNWLSPPEHLHISP----------LFDDEVV 253 Query: 182 VWLRKDHPALHQTWNLDTFLRYPHISICW-EQSDTWALDNVLQELGRERTIAMSLPEFEQ 240 L HP + L +L PH++ +D L E G +R I ++LP F Sbjct: 254 CMLGAQHPLARKGLTLKHYLEMPHLAPAPYASMQRSMIDQALAEQGYKRNIQVTLPYFGL 313 Query: 241 SLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 ++ + D ++ T ++ +Y Q + +V P+ F + F LWH+R Sbjct: 314 VPYVLMKTD-MVFTTGRQFAAHYAQYLPIRMVPSPVTFPRMR-------FYQLWHERCHA 365 Query: 301 NPKIVWLRETIKNLYASM 318 P ++W+R I + + Sbjct: 366 APDVMWMRRMIAEVATDL 383 >UniRef50_C9PC13 Transcriptional regulator LysR family n=1 Tax=Vibrio furnissii CIP 102972 RepID=C9PC13_VIBFU Length = 310 Score = 247 bits (632), Expect = 3e-64, Method: Composition-based stats. Identities = 79/321 (24%), Positives = 140/321 (43%), Gaps = 22/321 (6%) Query: 1 MKKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPL 60 MKK +DLNL+ + + +SV A R+N++ SA S SLA+LR+ +D LF+ Sbjct: 1 MKK-FDNIDLNLMKVFYYVYETQSVQMTADRLNISQSACSHSLARLRSRLNDELFIRING 59 Query: 61 GLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPR--GLKFELAAESPLMMIMLNALSKQ 118 + PT + Q++ +++ L+ P F ++ ++ L+ Sbjct: 60 KMIPTNQAEQLAQSIQPALELLYSGLNTATPFDPAVGQHHFVISGYDFSAWCVMPTLTAY 119 Query: 119 IYQRYPQATIKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFS 177 + + +P T++L D + + GE+D+ +S + +++ S Sbjct: 120 LAEHFPNITVRLVQSDKQIPTEHLESGEIDLSLGFDHEAEQSNHIGNAI--------WQS 171 Query: 178 DVPCVWLRKDHPAL--HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSL 235 C+ + H AL + +LDTFL YPH+ + +D L +L ++R +A++L Sbjct: 172 GQYCIAMDNQHDALMAGRPLDLDTFLAYPHVLVTPWNEPRGIVDATLGKLNKKRQVAVTL 231 Query: 236 PEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWH 295 P + F+ N LA Y + QL VA P+P + L WH Sbjct: 232 PSVLSAPFLLKGT-NYFLAAPESYLETLADTLQLAFVAPPIPIP-------QYHIKLYWH 283 Query: 296 KRNSHNPKIVWLRETIKNLYA 316 K +PK+ WL + +L A Sbjct: 284 KVREKDPKVNWLIHRLCDLAA 304 >UniRef50_B1J7P4 Transcriptional regulator, LysR family n=5 Tax=Pseudomonas RepID=B1J7P4_PSEPW Length = 314 Score = 247 bits (630), Expect = 5e-64, Method: Composition-based stats. Identities = 78/319 (24%), Positives = 133/319 (41%), Gaps = 20/319 (6%) Query: 1 MKKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPL 60 M + +L L L L L+Q ++++ AA+R+ V+ SA+S+ LA LR FDDPL V Sbjct: 1 MNPTFASLSLAHLRTLDCLLQLKNLSHAAERLGVSQSALSRQLAHLREAFDDPLLVRQGR 60 Query: 61 GLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQI 119 G + ++ + L + ++ L R +F LAA + ML L + Sbjct: 61 GYVLSEYGQALVEPLRQVLEELQALRQPAAFDPARCERRFCLAASDYVAEHMLPLLVAAL 120 Query: 120 YQRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 Q P +I R W + GE+D+ L P + +L D Sbjct: 121 EQEAPGVSIDYRTWQAGQYALLASGEIDLA----------TTLFDESPANLHGRLLGEDR 170 Query: 180 PCVWLRKDHPALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEF 238 +R+DHP + + D +L + H+ I +D L+ G +R I++ +P F Sbjct: 171 AVCLMRRDHPLTACEVLSQDDYLAFKHVRISGGGDKDSFIDRHLRTQGLQRRISLEVPFF 230 Query: 239 EQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRN 298 ++ + L + +LH L PL F E Q+ + ++WH+R Sbjct: 231 SATVQVVGNS-QALATVPEHIARQLCRLHG--LAWRPLGFVEHTQR-----YWVVWHQRL 282 Query: 299 SHNPKIVWLRETIKNLYAS 317 + + WLR + L+ Sbjct: 283 QASAEHRWLRNRVFELWRQ 301 >UniRef50_A1U8Q8 Transcriptional regulator, LysR family n=1 Tax=Marinobacter aquaeolei VT8 RepID=A1U8Q8_MARAV Length = 312 Score = 247 bits (630), Expect = 5e-64, Method: Composition-based stats. Identities = 80/314 (25%), Positives = 136/314 (43%), Gaps = 28/314 (8%) Query: 7 TLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTP 66 DLNLL L E++VT+A +R++++ +VS +L +LR F DPLF+ + PT Sbjct: 4 NYDLNLLRTFHALYLEQNVTRAGERLHLSQPSVSAALGRLRELFKDPLFIRDRQRMRPTE 63 Query: 67 LMVSMEQNLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQIYQRYP 124 + + + + L+ +P FE+AA +++L AL+ + ++ P Sbjct: 64 TADHLFPVIEAALTDLDGLITSERDFSPATEQRHFEIAANDYFEVLILPALASVLREQAP 123 Query: 125 QATIKLRNWDYDSLDA-ITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVW 183 T+++R D +A I G D+ F + P + + EV+ + C Sbjct: 124 GITLQVRRLSQDMSEAGIMSGTTDLAFGRQVDPPDNLVV---------REVILEGIEC-L 173 Query: 184 LRKDHPALH-----QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEF 238 + +HP L D F RY H+ I + L+ +R +A+++ F Sbjct: 174 VGNEHPLLERLKGNGQMTRDDFERYAHVLIQPHTRLKSGIFKQLESQNLKRKVALAVTYF 233 Query: 239 EQSLFMAAQPDNLLLATAPR-YCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKR 297 + L+A+ P CQ++ + + VA P+ FD PF L WH R Sbjct: 234 MAVPALLEGSS--LIASLPTGLCQHFRRQFAVTPVAPPVAFDA-------FPFHLSWHHR 284 Query: 298 NSHNPKIVWLRETI 311 +P WLRE I Sbjct: 285 YQKDPAHRWLREQI 298 >UniRef50_Q13QG3 Transcriptional regulator, LysR family n=9 Tax=Proteobacteria RepID=Q13QG3_BURXL Length = 316 Score = 246 bits (629), Expect = 7e-64, Method: Composition-based stats. Identities = 70/310 (22%), Positives = 124/310 (40%), Gaps = 21/310 (6%) Query: 9 DLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLM 68 DLNLL + RS+T A +R+ +T AVS +L +LRA FDDPLFV +P G+ PT Sbjct: 10 DLNLLRVFLAISDLRSLTAAGERLGLTQPAVSHALRRLRALFDDPLFVRTPTGMVPTDAA 69 Query: 69 VSMEQNLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + L + + N+ + + P F ++ L L + + Sbjct: 70 LRLHAPLTQAFGIINVAVQQIARFDPATAQRVFRVSMSDMSEFYFLPPLLSMLDRSARGI 129 Query: 127 TIKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 +++ N DS+ A+ GE+D+ + L + LF D +R Sbjct: 130 RLEIANVSVDSVSSAMRSGEIDLALG----------YVPGLDTGCVSKTLFVDEHVCVVR 179 Query: 186 KDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMA 245 HP Q + ++ + ++ L+EL R I + LP F + + Sbjct: 180 AGHPLRKQKPTKEDLANLRYVYASTNATGHRMVEQWLEELNLRRDIVLRLPHFVVAPEIV 239 Query: 246 AQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIV 305 D ++ Q +N+ ++ LP + + H + S +P I Sbjct: 240 QHTDLAMI-FPRSIAQRFNRNKAFRILPLPFALP-------PIEIQVHSHSQFSADPGIA 291 Query: 306 WLRETIKNLY 315 WL + I +++ Sbjct: 292 WLLDAIYDMF 301 >UniRef50_A9C385 Transcriptional regulator, LysR family n=2 Tax=cellular organisms RepID=A9C385_DELAS Length = 332 Score = 246 bits (629), Expect = 7e-64, Method: Composition-based stats. Identities = 85/316 (26%), Positives = 144/316 (45%), Gaps = 21/316 (6%) Query: 4 SITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLS 63 ++ ++DLNLL+ + L++ERSV KAA R+ +T SAVS +L +LR F+DPL + + G+S Sbjct: 16 NLRSIDLNLLVIFEALVEERSVGKAAARLGITSSAVSHALRRLRTQFNDPLLLRTAEGMS 75 Query: 64 PTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGLK--FELAAESPLMMIMLNALSKQIYQ 121 PTP V + ++ + ++ P + F L + +++L L + Sbjct: 76 PTPEAVRLARSFRKAFSEIESAIEVSKGFDPATARRNFHLRLSDYVGVLLLPQLCIHLRA 135 Query: 122 RYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPC 181 P ++ ++++D E G R S R R +LS+ L D Sbjct: 136 VAPGISLSVQSFDGRQPSDRVEYE---GVEIRLSVSRGRSVLSA------SRRLLDDQWM 186 Query: 182 VWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQS 241 V +RKDHPA L+ +L H+ + + +D +L E G R + +P + Sbjct: 187 VLMRKDHPAAASPLTLEKYLEQGHLKVT--GVGSSIVDELLAERGLARRVMFQVPTWLGM 244 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 + + D L+A P + ++ L VA P+P E L + +WH RN H+ Sbjct: 245 VPVIESTD--LVAAMPAHW-MHSVLSGSNCVARPMPLPE-----LALSIDAVWHPRNDHD 296 Query: 302 PKIVWLRETIKNLYAS 317 W RE I ++ Sbjct: 297 AGHKWFRELIHQIFQE 312 >UniRef50_A4XX96 Transcriptional regulator, LysR family n=3 Tax=Proteobacteria RepID=A4XX96_PSEMY Length = 312 Score = 245 bits (627), Expect = 1e-63, Method: Composition-based stats. Identities = 84/318 (26%), Positives = 144/318 (45%), Gaps = 24/318 (7%) Query: 6 TTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPT 65 LDLNLL+ L+ L+ E++VT+AA R++++ AVS L++LR F+DPL + + G++PT Sbjct: 4 RRLDLNLLVTLEALLIEQNVTRAAARLHLSQPAVSAQLSRLRDVFNDPLLIPAQRGMTPT 63 Query: 66 PLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQIYQRY 123 + + L + + + + P L +A + ++ L + + Sbjct: 64 VKALELLVPLRQALDQVRATVTTHLNFEPATASLTVSIACTDYVQAALIKHLVVAMRREA 123 Query: 124 PQATIKLRNWDYDSLD-AITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCV 182 P I LR D L+ +TRGEVD+ ++ P A+ + L+ + + Sbjct: 124 PGVRIALRILDVPQLELQMTRGEVDLAVIN----------MNGAPPALHAQHLYDESYVL 173 Query: 183 WLRKDHPALHQTWNLDTFLRYPHISICWEQSD-TWALDNVLQELGRERTIAMSLPEFEQS 241 R+ HP+LH +D F + H+ + + ++DN L G R + +S F Sbjct: 174 IGRRGHPSLHAGLTVDEFAQLEHVVVSLRGGGFSTSVDNALVARGLRRNVVLSASSFLPV 233 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 + AQ D +A PR + QL VA PLP + + WH+R+ + Sbjct: 234 PELVAQSD--CVALVPRRL-VEGRDEQLLCVAPPLPVE-------GFAIGMFWHERSDGH 283 Query: 302 PKIVWLRETIKNLYASMA 319 W+RE I + S A Sbjct: 284 AGFRWVREFITLVADSRA 301 >UniRef50_Q46T42 Regulatory protein, LysR:LysR, substrate-binding n=2 Tax=Burkholderiaceae RepID=Q46T42_RALEJ Length = 330 Score = 245 bits (627), Expect = 1e-63, Method: Composition-based stats. Identities = 65/315 (20%), Positives = 124/315 (39%), Gaps = 20/315 (6%) Query: 6 TTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPT 65 D NLL +++ERSVT+AA ++ +T SA+S +L +LR +FDDPLFV + G++PT Sbjct: 4 DAFDYNLLTVFDAMLRERSVTRAAAQLGLTQSAMSHALNRLREFFDDPLFVKTAAGMTPT 63 Query: 66 PLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQIYQRY 123 ++ + + + M + P F L ++ L L K++ Sbjct: 64 IKAEALSETVLDVMTAMRTRVLPQASFDPATMQRTFTLCMTDMGELVFLPPLMKRLRVVA 123 Query: 124 PQATIKLRNWDYDSLD-AITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCV 182 P ++ ++ + G+ D+ ++ P S + LF Sbjct: 124 PHCKLRTLQVPVPQIEGLLASGDADLLLGSVQTAPESL----------FRQQLFMHGFVT 173 Query: 183 WLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 + + + ++ F PH+++ + + D + G R I + P F Sbjct: 174 IVSTKNRQVRDALTIEQFESMPHVTVSLAGRTSPSYDAAFESHGLRRNIYLHTPHFLSIP 233 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 + Q L+ +++ + +V + + WH R H+P Sbjct: 234 LLMEQQPELIATVPQELANVFSRYGIVRVV-------KPPVVLPPYALSQYWHPRFHHDP 286 Query: 303 KIVWLRETIKNLYAS 317 IVWLR+ +K + Sbjct: 287 AIVWLRQLVKQTFDR 301 >UniRef50_C5AL93 Transcriptional regulator, LysR family protein n=13 Tax=Burkholderia RepID=C5AL93_BURGB Length = 331 Score = 245 bits (627), Expect = 1e-63, Method: Composition-based stats. Identities = 80/323 (24%), Positives = 137/323 (42%), Gaps = 26/323 (8%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 +S+ +DLNLL +++E+S+TKA R+ ++ A+S SLA+LRA FDDPLFV + G+ Sbjct: 2 RSLDGVDLNLLQVFLAIVEEQSLTKAGARLALSQPAMSYSLARLRALFDDPLFVRTRHGM 61 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTP--RGLKFELAAESPLMMIMLNALSKQIY 120 PTP+ + +A + L P F L+ M L ++ +++ Sbjct: 62 QPTPISQELAVIVARALDTVREALRYAERFDPAVSTRAFRLSLSDAGEMAYLPSICEEVN 121 Query: 121 QRYPQATIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 + P + ++ + DA+ +D L L ++VLF + Sbjct: 122 RLAPNIKVVVQPLPVGEIEDALRARRLDFAIGN----------LPELTARTRHQVLFEEG 171 Query: 180 PCVWLRK--DHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPE 237 +R+ PA L F R H+ + + ALD+ L+ G R I + +P Sbjct: 172 YVCMMRRRVGGPA-RPALTLAEFGRASHVLVRSIEHSHHALDDALRTQGVARNIGLEVPH 230 Query: 238 FEQSLFMAAQPDNLLLATAP-RYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHK 296 F + A D +AT P R Q + + + LP+ V T+ WH+ Sbjct: 231 FVALPRVLAVTD--FVATLPRRLAQIFAKDGAFDIFELPVAI-------APVGVTMHWHE 281 Query: 297 RNSHNPKIVWLRETIKNLYASMA 319 + I W+R+ + + A Sbjct: 282 HFHEDEGIAWMRQLLGQIMRRFA 304 >UniRef50_A3YHF6 Transcriptional regulatory protein n=2 Tax=Gammaproteobacteria RepID=A3YHF6_9GAMM Length = 308 Score = 245 bits (626), Expect = 2e-63, Method: Composition-based stats. Identities = 68/314 (21%), Positives = 132/314 (42%), Gaps = 19/314 (6%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 + DLNL++ +M+E+S+T AA + +T +VS +++++R + DPLFV G+ P Sbjct: 1 MAKTDLNLVVIFDAIMKEKSITSAADSLAMTQPSVSNAVSRMRHAWKDPLFVKEGRGIRP 60 Query: 65 TPLMVSMEQNLAEWMQMSNLLLDKP-HHQTPRGLKFELAAESPLMMIMLNALSKQIYQRY 123 TP + + +AE + N + F + I+ L I Q Sbjct: 61 TPYATKLWKRVAEPLAQINHAIAPEYFDPLTSKASFRIGITDGSASIVWPELRHIIEQEA 120 Query: 124 PQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVW 183 P I + D + +VD+ F + + I Y+ ++ + Sbjct: 121 PNINIYAVPYKVDGELLLNNADVDLVFDYYDGN----------SDEIFYKSMYENQFVTV 170 Query: 184 LRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 +R DH ++ L+ +++ H+ + +D+ L EL +R AM++ F ++ Sbjct: 171 MRADHELANEELTLERYIKSEHLLVSLSGDVCGIVDDKLAELNAKRRTAMTVNSFASAIN 230 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 + Q ++ P ++ LV P+P + K +L WH RN+H+ Sbjct: 231 LIKQTRLIITMPYPIIAEHLAAG---DLVLKPVPLELPSIK-----ISLAWHSRNNHSQA 282 Query: 304 IVWLRETIKNLYAS 317 + WL + + + S Sbjct: 283 LKWLIKVLDRIIDS 296 >UniRef50_Q1MWN1 LysR-type regulatory protein n=1 Tax=Sphingomonas sp. A4 RepID=Q1MWN1_9SPHN Length = 302 Score = 245 bits (626), Expect = 2e-63, Method: Composition-based stats. Identities = 73/317 (23%), Positives = 125/317 (39%), Gaps = 21/317 (6%) Query: 4 SITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLS 63 I +DLNLL + + Q R V +AA+ + ++ AVS +L KLR +D LFV + G+ Sbjct: 3 KIRDVDLNLLRVFECVFQTRKVVEAAEILGISQPAVSNALKKLRELLNDELFVRTRSGMI 62 Query: 64 PTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQIYQ 121 PT + + + ++ ++ + ++ PR F +A M L I Sbjct: 63 PTQYAMQLAEPISYALKTLEIAIEASESFDPRRDKRHFVIATSDLGDMYFGPKLISHIRD 122 Query: 122 RYPQATIKLR-NWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 TI+ N +++ GEVDI R + + LF Sbjct: 123 ISQDITIEFVGNSRPHIFESLENGEVDILLGFRPDLITNMFVFR----------LFYQGW 172 Query: 181 CVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQ 240 + RKDHP + L I + E S + +++ L ++G +R I + F Sbjct: 173 RILARKDHPIFSSKAPREDLLACRWIGVRSEGSGSASVNAELLKVGMDRNIVVWTSNFGT 232 Query: 241 SLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 + A D L A P L ++P P D + + +WH + + Sbjct: 233 LAPLLAVGD--LAACVPEIYTTVID-EAFGLKSMPFPVDLPKH-----SISSVWHSKAHN 284 Query: 301 NPKIVWLRETIKNLYAS 317 +P WLR+ + L+ Sbjct: 285 DPANQWLRQQVSILFKE 301 >UniRef50_B9B1S8 Transcriptional regulator, LysR family n=1 Tax=Burkholderia multivorans CGD1 RepID=B9B1S8_9BURK Length = 319 Score = 244 bits (623), Expect = 3e-63, Method: Composition-based stats. Identities = 81/317 (25%), Positives = 140/317 (44%), Gaps = 24/317 (7%) Query: 4 SITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLS 63 S+ LDLNLL Q +++ERS+TKA +R+ ++ AVS SL +LR FDDPLFV + G+ Sbjct: 16 SVDHLDLNLLRVFQAIVEERSLTKAGERLALSQPAVSYSLGRLRTLFDDPLFVRTRAGMQ 75 Query: 64 PTPLMVSMEQNLAEWMQMSNLLLDKPHHQTP--RGLKFELAAESPLMMIMLNALSKQIYQ 121 PTP+ + + + + + M + L P F L+ M L A+ + + + Sbjct: 76 PTPVALELAGIVGKALDMVRVALRYAERFDPATSTRTFRLSLSDAGEMAYLPAICRALRE 135 Query: 122 RYPQATIKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 R P+ T+ ++ +++ +A+ +D L L +++LF + Sbjct: 136 RAPRVTLSVQPMPVEAIEEALRASRLDFAIGN----------LPELMPRTRHQLLFEETY 185 Query: 181 CVWL-RKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFE 239 R+ T L+ F+R H+++ + ALD+ L+ G R +A+ +P F Sbjct: 186 VCMTGRRRGLPSGTTLTLEQFVRAAHVNVKSVEHSHHALDDALRAQGVGRNVALEVPHFV 245 Query: 240 QSLFMAAQPDNLLLATAP-RYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRN 298 + D L AT P R Q N+ + L P T+ WH+ Sbjct: 246 ALPGVLQVTD--LYATLPKRLAQILNRDNAFRLY-------ALPVPLPPAPVTMHWHEHF 296 Query: 299 SHNPKIVWLRETIKNLY 315 + I W+R + + Sbjct: 297 HEDEGITWMRALLAEIV 313 >UniRef50_A5WDE8 Transcriptional regulator, LysR family n=1 Tax=Psychrobacter sp. PRwf-1 RepID=A5WDE8_PSYWF Length = 302 Score = 244 bits (622), Expect = 5e-63, Method: Composition-based stats. Identities = 81/312 (25%), Positives = 138/312 (44%), Gaps = 21/312 (6%) Query: 7 TLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTP 66 +D+ LLL Q + Q+ +++KAA+++++ A S L KLR FDDPLFV + PT Sbjct: 3 DIDVRLLLLFQAIYQQNTISKAAQKLDIGQPAASLGLNKLRQHFDDPLFVRVGNQMQPTQ 62 Query: 67 LMVSMEQNLAEWMQMSNLLLDKPHHQTP--RGLKFELAAESPLMMIMLNALSKQIYQRYP 124 ++ + +Q + D HH P +F ++ MI++ L K + Q P Sbjct: 63 TAQNLFPLVNNALQHIRAVNDYTHHFEPKNSSRRFHISMTDISHMIIVPKLIKYLKQHAP 122 Query: 125 QATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 + + + D+ ++ GE+D+ + L + F V + Sbjct: 123 HTKLDISAINSDTPSRMSSGEIDLAIG----------YIPHLEAGFFQQTFFEQHYSVVV 172 Query: 185 RKDHPALHQ-TWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 R+DHP L Q T L+ + + H + + + L++ L+ +R IA++LP + Sbjct: 173 RQDHPRLTQNTLTLEAYQQEQHADVISSGTGHYLLEDHLRRRHIKRHIAITLPTYLGVGL 232 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 + Q D L+AT P L + L LPLP D + + WH+R NP Sbjct: 233 IIQQTD--LVATLPDKLAKL-LLQENRLHTLPLPLDIPKYQ-----VKQHWHERMHANPD 284 Query: 304 IVWLRETIKNLY 315 WLR+ L+ Sbjct: 285 NQWLRQVCYALF 296 >UniRef50_D1TCI7 LysR family transcriptional regulator n=2 Tax=Burkholderia RepID=D1TCI7_9BURK Length = 329 Score = 244 bits (622), Expect = 5e-63, Method: Composition-based stats. Identities = 73/319 (22%), Positives = 137/319 (42%), Gaps = 20/319 (6%) Query: 2 KKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLG 61 + DLNLL+ + L++ERSVT+AA+R+ + AVS +L +LR F D LFV +P G Sbjct: 19 ENDFRRFDLNLLVTFRALLEERSVTRAAQRLLLGQPAVSGALKRLRETFGDELFVRTPQG 78 Query: 62 LSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQI 119 ++PTP + + + + ++Q + L +P P F + L ++++ + ++ Sbjct: 79 MTPTPRALELARQIEPFLQSLHQALTQPSVFDPASAQRVFRIGLSDSLELLLMPEIMARL 138 Query: 120 YQRYPQATIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSD 178 P + R+ D + + G +++ +PL V + Sbjct: 139 AAAAPGVKLIARSTDSTRAAAMLDDGAIELAVGVFR---ECVPWQRLMPLFSWRFVSVYN 195 Query: 179 VPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEF 238 V R+ H ++D FLR+ H+ + +D L+ G R + S F Sbjct: 196 PQLVRTRRKH------LSMDEFLRHRHVLTSFSAELRGFIDERLELQGLNREVVFSSSNF 249 Query: 239 EQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRN 298 S F+ + +AT P + + L L PLPF+ + +L+W + Sbjct: 250 ATSPFIVQRT--AAIATVPEFIGRVWR-DTLGLALSPLPFEVPGYE-----VSLMWAAAH 301 Query: 299 SHNPKIVWLRETIKNLYAS 317 +P + WL+ + + + Sbjct: 302 DQDPALAWLKREFADAFGT 320 >UniRef50_B6RAE8 Transcriptional Regulator, LysR family n=1 Tax=Pseudovibrio sp. JE062 RepID=B6RAE8_9RHOB Length = 307 Score = 243 bits (621), Expect = 5e-63, Method: Composition-based stats. Identities = 74/315 (23%), Positives = 136/315 (43%), Gaps = 16/315 (5%) Query: 1 MKK-SITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSP 59 M++ ++ +DLNLL+ L+ L++ R V+ AA +++++ AVS++L +LR +DPL V Sbjct: 1 MRQVNLRGVDLNLLVILEKLLETRHVSLAATQLHMSQPAVSRALQRLRDLLNDPLLVRIA 60 Query: 60 LGLSPTPLMVSMEQNLAEWMQMSNLLLDKP-HHQTPRGLKFELAAESPLMMIMLNALSKQ 118 T +++ L + ++ KP + + + L K+ Sbjct: 61 GDYELTERAAEIQRLLPSVLATIQDVIAKPEFDPATAQETIRFSGPELEVNLYGPPLLKR 120 Query: 119 IYQRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSD 178 + Q P ++L++ + + + GE SG+E + +L L Sbjct: 121 MKQEAPGMKLELKSNIRNQFEPLENGEAHFVLSGQEPSAATSQL--------HRISLGRF 172 Query: 179 VPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEF 238 + KDHP + +L+ +L HIS+ S +D L +GR+R +A+ + F Sbjct: 173 SYVCLMSKDHPLAGKPISLNDYLAQDHISVMITGSGQSIIDEKLAAMGRKRNVAVKIGSF 232 Query: 239 EQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRN 298 ++ Q D L L + + Y + + A P+P K F L WH+ Sbjct: 233 FAAMHFCGQTDLLFLVPSIFDKKIYEGHNTI---ASPVP---DFLKDHHQEFFLYWHECY 286 Query: 299 SHNPKIVWLRETIKN 313 H+P I W R +K Sbjct: 287 HHDPMIQWTRTLMKE 301 >UniRef50_Q2BJ61 Transcriptional regulator, LysR family protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BJ61_9GAMM Length = 302 Score = 243 bits (621), Expect = 5e-63, Method: Composition-based stats. Identities = 66/317 (20%), Positives = 133/317 (41%), Gaps = 19/317 (5%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 ++ ++DLNLL+ LQ L+ E+ V+KAA+R+N++ AVS++L +LR DP+ V + G Sbjct: 1 MNLRSVDLNLLVVLQALIDEQHVSKAAERLNMSQPAVSRALQRLRTTLQDPILVRTGSGY 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAE--SPLMMIMLNALSKQIY 120 + V + + L+ + ++ +P P + L +++++ + + + Sbjct: 61 DLSARAVVLREQLSHVLHEVQAIM-QPEQFDPMQAEGVLKLTGLDLELILLMPDVIRMLR 119 Query: 121 QRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 ++ P +++ + + + RG+V +G + + Sbjct: 120 EKAPNLRVEVVPQLPEHFELLERGDVHFTITGLFP--------QTHHDQYRRIEIARTGH 171 Query: 181 CVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQ 240 + +D+P +L + H + +D+ L E G +R + + L F Sbjct: 172 VCVMDRDNPLAKGELSLQDYANASHGLVSITGKGPGMMDDALGEFGYKRKVMLRLANFMS 231 Query: 241 SLFMAAQPDNLLLATAPR-YCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 Q D L+ T P+ + Q L L LP F EV + WH R Sbjct: 232 VAQFCQQSD--LIFTLPKIMATHLAQGTSLVLRPLPKEFALP-----EVVLYMYWHDRYH 284 Query: 300 HNPKIVWLRETIKNLYA 316 H+P W+R + +++ Sbjct: 285 HDPMCSWVRAELAEIFS 301 >UniRef50_Q391Q9 Transcriptional regulator, LysR family n=1 Tax=Burkholderia sp. 383 RepID=Q391Q9_BURS3 Length = 322 Score = 243 bits (620), Expect = 7e-63, Method: Composition-based stats. Identities = 76/321 (23%), Positives = 130/321 (40%), Gaps = 17/321 (5%) Query: 1 MKKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPL 60 MK LDLNLL LM E +VT+AA+R+ ++ SAVS +L +LR D LF + Sbjct: 1 MKDVFRQLDLNLLRVFAALMAEGNVTRAAERLALSQSAVSNALRRLRESLGDVLFEKTVS 60 Query: 61 GLSPTPLMVSMEQNLAEWMQMSNLLLDK-PHHQTPRGLKFELAAESPLMMIMLNALSKQI 119 G+ PT + + + F +A + ++ L+ + Sbjct: 61 GVRPTARARELWSAVQPHFDALKQAISPDQFDPQEHRGTFTIAMSDYSVERIMPRLAHFM 120 Query: 120 YQRYPQATIKLRNWDYDSLDAI-TRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSD 178 + P I+L + L A+ RG VD+ G + SS + ++ Sbjct: 121 GEHAPSMRIELTPFSVADLPAMFDRGGVDLAIGGYLND-------SSPSSGVRTHEMWPI 173 Query: 179 VPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEF 238 +RKDHP L FL H+ + + D++L G +R + ++L + Sbjct: 174 HWSCLMRKDHPLAKGPLTLKRFLAARHLDVGFSGMRVPVYDSLLSAHGLQRNLVLTLNAY 233 Query: 239 EQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRN 298 +L + + D + P L L + L + + P+ ++WH+R Sbjct: 234 SPALAIIRESD--FIGVLP------TTLLDLSIHEKELVSRQPPVRMPARPYCVIWHQRW 285 Query: 299 SHNPKIVWLRETIKNLYASMA 319 +P WLR+TI +L+ A Sbjct: 286 DSHPAHRWLRQTIVSLFTRPA 306 >UniRef50_A6EW06 Transcriptional regulator n=2 Tax=Marinobacter RepID=A6EW06_9ALTE Length = 315 Score = 243 bits (620), Expect = 8e-63, Method: Composition-based stats. Identities = 70/310 (22%), Positives = 126/310 (40%), Gaps = 20/310 (6%) Query: 10 LNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMV 69 L LL +M ERSVT+AA R+ +T AVS +++++R ++DPLFV + PT + Sbjct: 6 LQLLYIFDAIMTERSVTRAADRLAMTQPAVSNAISRMRQIWNDPLFVRKGRNIEPTSYAL 65 Query: 70 SMEQNLAEWM-QMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQATI 128 S+ + + M ++N + F +A ++ ++ L + + P + Sbjct: 66 SLWDQVGDPMFALTNAVSATQFDPASARRTFRIAVTDVIVEMIWRQLIDLLEREAPGVDV 125 Query: 129 KLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKD 187 + + S D + VD+ H S L + +R D Sbjct: 126 HAVPYTPEGSYDDLRSAHVDLAIGVLNQHDYSL----------RSTWLLDSGFVLAMRAD 175 Query: 188 HPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQ 247 HP + ++ FL H+ + ++D+ L + G+ R IA ++ F + + Sbjct: 176 HPLAGRQITMEEFLEARHLLVTMSGDAHGSVDSYLDQKGQSRRIAATMNHFASVPQVLRE 235 Query: 248 PDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWL 307 NL+ A Q + L + LP D L+WH R+ P I+W+ Sbjct: 236 S-NLIAAVPELISQDCGFVDGLWMGELPFDVD-------PTSLYLIWHARHDREPGIIWI 287 Query: 308 RETIKNLYAS 317 R I+ L + Sbjct: 288 RNHIERLLQA 297 >UniRef50_Q39AY8 Transcriptional regulator, LysR family n=1 Tax=Burkholderia sp. 383 RepID=Q39AY8_BURS3 Length = 331 Score = 242 bits (619), Expect = 9e-63, Method: Composition-based stats. Identities = 70/322 (21%), Positives = 121/322 (37%), Gaps = 25/322 (7%) Query: 4 SITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLS 63 + +DLNLLL +L + RS T+AA +++T +VS +L +LR FDD LFV + G+ Sbjct: 22 DLRNIDLNLLLVFDVLYRTRSTTRAADALHLTQPSVSNALKRLRTLFDDALFVKTADGMQ 81 Query: 64 PTPLMVSMEQNLAEWMQMSNLLLDKPHHQTP--RGLKFELAAESPLMMIMLNALSKQIYQ 121 PTP ++ + E + L P F L I + L + + Sbjct: 82 PTPRADAIAARVDEGLASLRTALQAGRAFDPATSTRTFRLYTSDLGQAIFMPPLVAHLRR 141 Query: 122 RYPQATIKLRNWDYDSLDAITR-GEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 P I + D+ + + G++D+ + + L + LF + Sbjct: 142 VAPGIRIVTADPPLDAAQQMMKLGQIDLALG----------MFTGLHADFHQQRLFHETY 191 Query: 181 CVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQEL----GRERTIAMSLP 236 +R DHP + T + F H+S + L L G R + + L Sbjct: 192 VALVRNDHPMIGATLTAEQFFAADHVSYTPTAGSHAHFEAALYALSPHAGSTRHVVLQLA 251 Query: 237 EFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHK 296 + + D L+ R + +L + V+LP WH+ Sbjct: 252 HSFGLERIVSSSD-LIACIPSRLARELARLQDVRAVSLPF-------DTAPADIAQFWHE 303 Query: 297 RNSHNPKIVWLRETIKNLYASM 318 R + WLR + +L+ + Sbjct: 304 RYQRDEGHQWLRTLVYDLFHDL 325 >UniRef50_B7VQV6 Transcriptional regulator n=10 Tax=Vibrionales RepID=B7VQV6_VIBSL Length = 315 Score = 242 bits (619), Expect = 1e-62, Method: Composition-based stats. Identities = 73/307 (23%), Positives = 132/307 (42%), Gaps = 20/307 (6%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 + ++LNLL L +L++E V++ A+R+++T SAVS+ LA+LR DPL V L P Sbjct: 2 LGNINLNLLRSLHVLLEECHVSRTAQRLHITQSAVSRQLAQLRDLCGDPLLVRDGNKLVP 61 Query: 65 TPLMVSMEQNLAEWMQMSNLLL-DKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRY 123 T + ++ L + + + LL DKP + LA+ + +L + ++ + Sbjct: 62 TNRALLLKGKLDDLLGEFDHLLDDKPFDPQDWQGELVLASSDYVAQYILPIIVSEVSKDA 121 Query: 124 PQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVW 183 P + R W + L+ + + + + P + L D Sbjct: 122 PHINLAYRLWQPNFLETLNESGIHLA----------SSMFPKKPDHVSSIKLGEDKSVCL 171 Query: 184 LRKDHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 +R HP Q+ + + + Y HI + D L++ G +R IA+ +P F + Sbjct: 172 MRASHPLAKQSAISSEDIVNYSHIKVTGGGDKDSYSDIALKKQGHKRRIALQVPFFSSAG 231 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 + Q D L++ P + YN L + LPF+ + L+WH + ++ Sbjct: 232 NVLMQDDYLMI--VPEHIA-YNLGRHLDVAYFSLPFETEMH-----TYWLMWHPKYDNDS 283 Query: 303 KIVWLRE 309 W RE Sbjct: 284 AHKWARE 290 >UniRef50_Q2G901 Transcriptional regulator, LysR family n=2 Tax=Alphaproteobacteria RepID=Q2G901_NOVAD Length = 302 Score = 242 bits (618), Expect = 1e-62, Method: Composition-based stats. Identities = 69/318 (21%), Positives = 133/318 (41%), Gaps = 21/318 (6%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 LDLNLL+ LM+ RSVT+AA+RI +T A S +L +LR +F D + V + P Sbjct: 3 FKGLDLNLLVVFDALMETRSVTRAAERIGLTQPATSAALRRLRDYFRDEIVVAVGKRMHP 62 Query: 65 TPLMVSMEQNLAEWMQMSNLLLDKPHHQTP--RGLKFELAAESPLMMIMLNALSKQIYQR 122 TP ++ + + ++ + P P +F + +M+ +L L ++ + Sbjct: 63 TPFAEALHPQIQQALRRVERAISMPTEFDPSTSTRRFRIIGSDYIMVAVLVPLIERFART 122 Query: 123 YPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCV 182 P I++ + S+ + G D+ + L EVLF + V Sbjct: 123 APGVRIEIIQPNEHSVAELEAGRADLLVTPEPF----------LASWHPSEVLFDEEQVV 172 Query: 183 WLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWAL-DNVLQELGRERTIAMSLPEFEQS 241 +P + D F H+++ + + T A D+ L +GRER + +++ F + Sbjct: 173 VGWAQNPIFARGVTADDFYAAGHVTVAFGANRTPAFADSALSRMGRERRVEVTVGSFASA 232 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 + L + R + + L +P F Q+ + +H+ + + Sbjct: 233 PWFIEGTSRLAVLH-ERLVRQIARRFNLAWARMPFDFPTMQEM-------MQFHEARAED 284 Query: 302 PKIVWLRETIKNLYASMA 319 + WLR+ ++ + + A Sbjct: 285 AGLAWLRQQMREVASENA 302 >UniRef50_Q88I06 Nodulation protein d1 n=4 Tax=Gammaproteobacteria RepID=Q88I06_PSEPK Length = 312 Score = 242 bits (618), Expect = 1e-62, Method: Composition-based stats. Identities = 72/314 (22%), Positives = 143/314 (45%), Gaps = 21/314 (6%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 LDLNLL+ L +L++E+++T+AA+R+++T SA S L +LR +F+D L V + P Sbjct: 3 FHHLDLNLLVALDILLEEQNITRAAERLHMTQSATSGVLGRLRTFFEDELLVQVGRKMQP 62 Query: 65 TPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQIYQR 122 TP + + + + E + + P F L A L+ ++ + ++I+Q Sbjct: 63 TPYALELAKPVREVLLTIRASITAKPVFDPAASKRHFRLVASDYLISVVFAQVIQKIHQE 122 Query: 123 YPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCV 182 PQ T ++ S + + RGEVD+ R L+ P ++LF + Sbjct: 123 APQITFEMIGPGDSSAELLMRGEVDMMIVPE------RYLIEGHPA----QLLFEEDHVC 172 Query: 183 WLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVL-QELGRERTIAMSLPEFEQS 241 + +D+P + + L+ +++ HIS+ + ++ ++++ + G R + + +F Sbjct: 173 VVWRDNPEVGEHLTLEQYMQMGHISVGFGRNRHLSIEDWFMNQYGFNRRLEVITNDFNTL 232 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 + + R + Y L L+ P+ ++ +LWH+ + Sbjct: 233 PQLLVGT-VRVATMHRRLAELYAGYLPLRLLPPPVKIPVMRE-------FMLWHRSMDGD 284 Query: 302 PKIVWLRETIKNLY 315 P WLRE I ++ Sbjct: 285 PMHRWLRERISDVI 298 >UniRef50_A8GZD3 Transcriptional regulator, LysR family n=22 Tax=Gammaproteobacteria RepID=A8GZD3_SHEPA Length = 335 Score = 242 bits (617), Expect = 2e-62, Method: Composition-based stats. Identities = 93/313 (29%), Positives = 159/313 (50%), Gaps = 9/313 (2%) Query: 2 KKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLG 61 + + LD NLL L++L++E+SVT AA R++++ SAVSK L+KLR FDD LF + G Sbjct: 23 RPIVKQLDFNLLRVLEVLLEEQSVTSAATRLHLSQSAVSKQLSKLRETFDDQLFERTAYG 82 Query: 62 LSPTPLMVSMEQNLAEWMQMSNLLLDKP-HHQTPRGLKFELAAESPLMMIMLNALSKQIY 120 L TP + + L E +Q + +F + + ++ Sbjct: 83 LKATPRALQLAPELREVLQKLDQFTRPSTFEPAESQRRFRMHIVETAYSLTYPYFMPKLL 142 Query: 121 QRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 ++ PQ +I W + S++ + R E+D+G RE RS +++LP + L D P Sbjct: 143 KQAPQVSINGHTWSHSSMEQLLRCEIDMGIICREWDKRSLLHMNNLPEELGAAELIRDYP 202 Query: 181 CVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQ 240 LR+DHPAL + WN+DTFL+Y H+ + + + W LD+VL+ +R +A+++ +F Sbjct: 203 VCLLRRDHPALKEPWNIDTFLKYRHLQVAFGGLEHWLLDDVLRLDHLQRDVAVNMTDFNC 262 Query: 241 SLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 ++ + D +L A +Y Q + L + +P+ + + L+WHK + Sbjct: 263 AMDLCENSDLILCA-PRKYIQQMMVNYDLVCLDVPVHVEPGA-------YVLVWHKHFNL 314 Query: 301 NPKIVWLRETIKN 313 +P WLR I + Sbjct: 315 DPSHSWLRNLIID 327 >UniRef50_Q7NT25 Probable transcription regulator protein n=1 Tax=Chromobacterium violaceum RepID=Q7NT25_CHRVO Length = 310 Score = 242 bits (617), Expect = 2e-62, Method: Composition-based stats. Identities = 77/309 (24%), Positives = 129/309 (41%), Gaps = 20/309 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 L+LNLL L+ L++ R++T++A R+ +T SA+S+ L +LRA F DPL + T Sbjct: 5 LNLNLLRSLEALLETRNLTRSAARLGLTQSAMSRHLVQLRAQFQDPLLLREGQRFVLTER 64 Query: 68 MVSMEQNLAEWMQMSNLLLDKP-HHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + L ++ L P + +F A L ML + ++ + P Sbjct: 65 AEELRLGLKAVLEQVEQLYQPPQFDPSACEREFSFAGSDYLAEYMLPDILDRVLPQAPGM 124 Query: 127 TIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRK 186 +K W D ++ G D+ + +P I + L D P + Sbjct: 125 RLKFIPWQAGRFDLLSDGAADL----------ISTIADEVPDNIYGKSLGQDQPMCVMAD 174 Query: 187 DHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMA 245 +HP + D +L +PH + +D L G R I ++ P F +L + Sbjct: 175 NHPLHDKPALERDDYLAWPHARVSSASDKDGFVDIQLARNGLSRQIRIATPYFVSALSIV 234 Query: 246 AQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIV 305 ++ LL T P + Q Q P+ A PLPF + + + LLWH R +P Sbjct: 235 SRS--QLLLTLPEHLAVRFQ-RQFPVRAKPLPFIDYTYR-----YWLLWHGRADKDPAHR 286 Query: 306 WLRETIKNL 314 W R + ++ Sbjct: 287 WFRGHVFDV 295 >UniRef50_A1WMY5 Transcriptional regulator, LysR family n=1 Tax=Verminephrobacter eiseniae EF01-2 RepID=A1WMY5_VEREI Length = 304 Score = 242 bits (617), Expect = 2e-62, Method: Composition-based stats. Identities = 78/315 (24%), Positives = 144/315 (45%), Gaps = 23/315 (7%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 + +DLNLL+ Q L++ER+V++AA+R+ ++ SAVS +L +LR F D L V P G+ P Sbjct: 3 LRQIDLNLLVTFQALVEERNVSRAAERLALSQSAVSHALKRLRNTFQDELLVRGPRGMEP 62 Query: 65 TPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQIYQR 122 TP V++ + + +D+ P + L+ + ++ + + + Sbjct: 63 TPRAVTLAIAVKSGLATIETAVDEKRSFDPATCHSTYYLSVTEYVRPFIMAHMCAYVREA 122 Query: 123 YPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCV 182 P + + D + + + R +L + P ++ LF D V Sbjct: 123 APHVRLVFESPDEHQVGS--------AVAYEGLQIRLADLPVNGP--MESMRLFDDTFAV 172 Query: 183 WLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 +R++HP Q L+ +L+ HI + + A+D L R + + +P + ++L Sbjct: 173 AMRREHPFAEQELTLEKYLQLAHIKVT--GVGSSAIDRALTARSLVRDVVVKMPNWLEAL 230 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 + D L+ P + +L + + PLP L++P WH RNS +P Sbjct: 231 EVVECTD--LVVAMPNHWTRLGRLPRC-CITRPLPL------ALQMPIDAAWHPRNSSDP 281 Query: 303 KIVWLRETIKNLYAS 317 VWLRET++ +A+ Sbjct: 282 AHVWLRETVRQAFAA 296 >UniRef50_Q0VLU8 Transcriptional regulator, LysR family n=2 Tax=Alcanivorax RepID=Q0VLU8_ALCBS Length = 310 Score = 241 bits (616), Expect = 2e-62, Method: Composition-based stats. Identities = 77/312 (24%), Positives = 124/312 (39%), Gaps = 23/312 (7%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 ++ DLNL + + E S+T+AAK +N+T AVS +LA+LRA +DPLFV + Sbjct: 1 MHVSRFDLNLFVVFDAIYTEGSLTRAAKVLNLTQPAVSHALARLRARLNDPLFVRQGSRM 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPR--GLKFELAAESPLMMIMLNALSKQIY 120 PT +M + + L + F L L +L AL Q Sbjct: 61 VPTARARAMVSPVRHALGGFQRCLSEEGGFDASEAERTFVLGLRDGLEARLLPALMSQFM 120 Query: 121 QRYPQATIKLRNWDYDSLD-AITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 P ++ + + G +D+ +++ +LP AI+++V+ Sbjct: 121 DEAPGIKLQSLTVSRRQMATELASGRLDLA----------CDVMLALPEAIEHQVVLEGP 170 Query: 180 PCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFE 239 V +R+ HP +L +L H+ + + D L G R I + ++ Sbjct: 171 LVVLMRESHPLAQG-MDLPDYLAAQHVLVSSRREGPGLEDFGLARQGYRRHIRLRCQHYQ 229 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 +L Q D LL T P QL LV P P + L WH+ S Sbjct: 230 AALSTVQQTDLLL--TMP--ASLAGQLSDQGLVWKPFP-----GGLPGLEMHLYWHRDQS 280 Query: 300 HNPKIVWLRETI 311 +P WLR+ + Sbjct: 281 ADPAHSWLRQRV 292 >UniRef50_A9GGP1 LysR-family transcriptional regulator n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9GGP1_SORC5 Length = 312 Score = 241 bits (616), Expect = 2e-62, Method: Composition-based stats. Identities = 72/316 (22%), Positives = 129/316 (40%), Gaps = 19/316 (6%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 +++ +D+NL++ L L+QERSVT AA+R+ ++ A+S +L +LR F DPL + + Sbjct: 1 MNLSAIDVNLVIALDALLQERSVTLAARRVGLSQPAMSHALTRLRELFSDPLLIRVGRQM 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLD---KPHHQTPRGLKFELAAESPLMMIMLNALSKQI 119 + T +M + + L F +AA + ++++ L+ + Sbjct: 61 ALTSRAEAMTPQVTAIVHDLAGLFGETTPTFDPATSDRAFRIAATEYVELVLMPRLNAAL 120 Query: 120 YQRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 Q P+ + L D ++DA+ GE+D+ SLP + LF D Sbjct: 121 AQGGPRLALHLLPLDGRAVDALRSGEIDLAIGVFPQE--------SLPPDLRRAPLFDDR 172 Query: 180 PCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFE 239 R HP +L T+ PH+ + + D+++ G R AM++P Sbjct: 173 FAGLARMSHPTARGQVDLQTYAALPHVVVPRRGAHDGVADDLIAARGIARHEAMTVPHVL 232 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 D L+ A R + ++ L L LP + + W+ R Sbjct: 233 LVPHAITASD-LVATVATRLGRAFSSLVPLRTFDLPFELP-------PIEIAMAWNSRTE 284 Query: 300 HNPKIVWLRETIKNLY 315 +P WLR + + Sbjct: 285 RDPARAWLRGVVTDTA 300 >UniRef50_D2B6V0 LysR family transcriptional regulator n=5 Tax=Actinomycetales RepID=D2B6V0_STRRD Length = 313 Score = 241 bits (616), Expect = 2e-62, Method: Composition-based stats. Identities = 76/312 (24%), Positives = 131/312 (41%), Gaps = 20/312 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 LDLNLL+ L L++E SV AA R+N + A+S++L ++R +DP+ V + L PTP Sbjct: 2 LDLNLLVALDALLEEGSVAGAAARLNTSAPAMSRTLGRIRRQLNDPVLVRAGRHLVPTPR 61 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQIYQRYPQ 125 + + + + ++ ++ LL P F L A L+ + L + QR P Sbjct: 62 ALELHAAVRDLVRQASALLVPAGDPAPATLARTFNLQASDMLLSALAAPLVLAVGQRAPG 121 Query: 126 ATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 ++ + A+ G VD+ ++ E L + R Sbjct: 122 VVLRFLPDTLEGTSALREGRVDLEIG----------VIDHAAPETCVEPLGTGRIVGMAR 171 Query: 186 KDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMA 245 +DHP + + L F H+ + +D++L G R A+++ +L +A Sbjct: 172 EDHPLVIKGVTLRRFADAKHVGVSRHGRLHGPIDDLLAARGLRRRTAVTVSSHSMALLLA 231 Query: 246 AQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIV 305 Q D + LA AP + L L A +P + EV + WH RN + Sbjct: 232 RQSDLVCLAPAP---ADDDLPAALGLRAFEIPLELP-----EVEVAMAWHPRNDADGGQR 283 Query: 306 WLRETIKNLYAS 317 WLR+ ++ + Sbjct: 284 WLRDQVREVLRG 295 >UniRef50_Q13JD9 Transcriptional regulator, LysR family n=1 Tax=Burkholderia xenovorans LB400 RepID=Q13JD9_BURXL Length = 305 Score = 241 bits (616), Expect = 2e-62, Method: Composition-based stats. Identities = 65/308 (21%), Positives = 123/308 (39%), Gaps = 22/308 (7%) Query: 9 DLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLM 68 DLNL+ + + SV+ AA+R+N+T VS +L++LR DPLF + G++PT Sbjct: 12 DLNLIRAFVAIYETGSVSAAARRLNLTQPTVSYALSRLRTLLHDPLFSRTREGMAPTFNA 71 Query: 69 VSMEQNLAEWMQMSNLLLDKPHHQTPRGLK--FELAAESPLMMIMLNALSKQIYQRYPQA 126 + + + + + + F +A + L + +++ + P Sbjct: 72 SQLYETFRQALDRIEGAIAATRYFDAATSTRCFRIALSDLGELYFLPRMVERLQRTAPGV 131 Query: 127 TIKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 +++ D + + + + G++D L + LFS+ + Sbjct: 132 ELEVVQLDVERTAEWLNTGQIDAAVGN----------LHLVGGKARRRYLFSETYSCLVS 181 Query: 186 KDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMA 245 HP + T +L ++R H+ + S +++V+ +G R IA+ +P F + + Sbjct: 182 HRHPWIGTTLSLGDYVRAKHV-VGASSSGHRLVEDVMTGMGLSRKIALRVPHFTNVVDVV 240 Query: 246 AQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIV 305 A D L+L R Y + + LP+P D L W R + Sbjct: 241 AGSD-LVLTLPARVANVYQSTGTVRALPLPVPVD-------PFDVNLYWQDRATDLSAQK 292 Query: 306 WLRETIKN 313 WL E I Sbjct: 293 WLCEIIAE 300 >UniRef50_B5XYZ1 Transcriptional regulator, LysR family n=5 Tax=Klebsiella RepID=B5XYZ1_KLEP3 Length = 308 Score = 241 bits (616), Expect = 2e-62, Method: Composition-based stats. Identities = 73/312 (23%), Positives = 130/312 (41%), Gaps = 21/312 (6%) Query: 7 TLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTP 66 LD L L + +V+ AA +N++ S L KLR F DPLFV + PTP Sbjct: 4 ELDFKSLRFFSALYRLGNVSPAADALNISQPTGSLLLKKLRDHFADPLFVRVGQRMMPTP 63 Query: 67 LMVSMEQNLAEWMQMS--NLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYP 124 ++ + +Q++ +L + F + M +L L + Q+ Sbjct: 64 RADAIAPTVFTLLQLADNDLAVKPEFLPQQSQRNFTIGMTDISQMTLLPLLQIALQQQAA 123 Query: 125 -QATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVW 183 T ++N D +L+A+ G+ D+ L+ LP ++ + LF Sbjct: 124 DGITFTIQNLDEQTLNALESGKCDLAIG----------YLTQLPDSVYQQHLFDQSYVCL 173 Query: 184 LRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 ++HP + + + + H++I E + +D L E R IA++LP F + Sbjct: 174 AAENHPRIRTQLRAEDWRQEKHLAIRVEGTAHGDMDKRLDEHSMPRRIALTLPSFLGTGE 233 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 + A+ D ++A P + + P + PLPF ++ + +WH+R +P Sbjct: 234 LVAESD--MIAVVPEQVARH-ITRRYPCRSWPLPFPLAR-----IAIRQVWHQRLHRDPG 285 Query: 304 IVWLRETIKNLY 315 +WLR I L Sbjct: 286 HIWLRSLIAALA 297 >UniRef50_A8GG55 Transcriptional regulator, LysR family n=1 Tax=Serratia proteamaculans 568 RepID=A8GG55_SERP5 Length = 310 Score = 241 bits (616), Expect = 2e-62, Method: Composition-based stats. Identities = 78/319 (24%), Positives = 139/319 (43%), Gaps = 23/319 (7%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 +++ +DLNLL+ + L Q R+VT A +R+N +VS +LA+LR FDDPLFV S G+ Sbjct: 1 MNLSNVDLNLLVVFEALYQTRNVTVAGQRLNRAQPSVSNALARLRTLFDDPLFVRSGGGM 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG---LKFELAAESPLMMIMLNALSKQI 119 PT + + ++ + L P P +F LAA + +L + ++ Sbjct: 61 LPTARAHQLMLQIQPVLEQIHQALTPPTRFDPATASQRRFRLAAGDYADITLLPTIISRL 120 Query: 120 YQRYPQATIKLRNWDYDS-LDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSD 178 Q P I++ D + + + RGE+D+ G +P + + LF++ Sbjct: 121 RQAAPGIDIRVSRLDRRTVVQQLERGEIDVALGGHL----------EVPEGMLVQPLFNE 170 Query: 179 VPCVWLRKDHP-ALHQTWNLDTFLRYPHIS--ICWEQSDTWALDNVLQELGRERTIAMSL 235 + HP ++WNL ++ PH + S +D L E+G ER +A + Sbjct: 171 SFTCIASRHHPQIAAESWNLQQYIGLPHALYAPSDDGSARGIIDQRLTEMGLERRVAATF 230 Query: 236 PEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWH 295 + A D L+ A + + ++ + LP S+ P + Sbjct: 231 SHIIALPAVVAGSD-LIATLATSVARQFADPSRIQFLPLP-----SELAMPAFPIECVAG 284 Query: 296 KRNSHNPKIVWLRETIKNL 314 ++ +P + WL +T+ L Sbjct: 285 RQVKRDPALAWLCDTLSQL 303 >UniRef50_A1VMI6 Transcriptional regulator, LysR family n=28 Tax=Bacteria RepID=A1VMI6_POLNA Length = 333 Score = 241 bits (615), Expect = 2e-62, Method: Composition-based stats. Identities = 72/298 (24%), Positives = 113/298 (37%), Gaps = 21/298 (7%) Query: 20 MQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSMEQNLAEWM 79 RSVT+AA+++ + VS LA+LR DPLFV +P G+ PTP ++ + E + Sbjct: 53 YNTRSVTRAAEQLGQSQPTVSIWLARLRRQLGDPLFVRTPEGMLPTPRTDALIATVREVL 112 Query: 80 QMSNLLLDKPHHQTPRGLK--FELAAESPLMMIMLNALSKQIYQRYPQATIKLRNWDYDS 137 + L + P + F + + +L L + PQ ++ D Sbjct: 113 EGLRRLSESESRFDPATAQRGFRIFMTDASHITLLPRLFSHVRALAPQVRLEAATIDARM 172 Query: 138 LDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPALHQTWNL 197 A+ GE D+ L+ L + LF HP + + + L Sbjct: 173 APALQSGEGDLALG----------LVPGLEAGFYQQTLFGQDWICLCNARHPRIGEMFTL 222 Query: 198 DTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQPDNLLLATAP 257 + HI I + LD L+ G R + + LP F + + D L+AT P Sbjct: 223 QDYAAEAHIGI-VSGTGYQLLDGALKSQGIARRVLLELPGFLGLAAILSTSD--LVATLP 279 Query: 258 RYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWLRETIKNLY 315 R+ + L LP PF+ WH R H+ WLR L+ Sbjct: 280 RHIGE-TLANAAGLRVLPCPFEIPG-----FTVKQYWHARYHHDAGNRWLRGVCAELF 331 >UniRef50_Q7MCZ8 Transcriptional regulator n=13 Tax=Vibrionaceae RepID=Q7MCZ8_VIBVY Length = 313 Score = 241 bits (615), Expect = 3e-62, Method: Composition-based stats. Identities = 74/297 (24%), Positives = 136/297 (45%), Gaps = 20/297 (6%) Query: 21 QERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSMEQNLAEWMQ 80 +E V++AA R+++T SA+S+ LA+LR DPL V L TP ++ L + + Sbjct: 18 EECHVSRAADRLHITQSAMSRQLAQLRELCSDPLLVREGNRLVATPHAEALRPKLVQLLS 77 Query: 81 MSNLLLD-KPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQATIKLRNWDYDSLD 139 L D + + + L++ + ++ LS+ + ++ P+ T+ R W LD Sbjct: 78 EFEHLFDHQAFNPQDWQGQLVLSSSDYVAQFIVPTLSRVLIEQAPRLTLSYRLWQPQYLD 137 Query: 140 AITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPALHQ-TWNLD 198 ++ + + +L S P + Y + D +R+ HP + +L+ Sbjct: 138 SLLDTGIHLA----------STMLPSPPKELSYTKIGEDYSVCVMRQGHPLSGKAALSLE 187 Query: 199 TFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQPDNLLLATAPR 258 LRY HI + A D+VL++LG+ R IA+ +P F ++ + Q D +++ P Sbjct: 188 DMLRYSHIKVTGGGDKDSATDSVLRKLGKTRHIALQVPFFSAAVNVLIQSDYMMV--VPE 245 Query: 259 YCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWLRETIKNLY 315 + N P+ PLPFD + + L+WH + H+ W+RE + + Sbjct: 246 HIAV-NLAKSQPICHYPLPFDTEIHQ-----YWLMWHPKYDHDSAHRWVREKVTRVM 296 >UniRef50_A1UYR8 Transcriptional regulator, LysR family n=32 Tax=Burkholderia RepID=A1UYR8_BURMS Length = 313 Score = 240 bits (614), Expect = 4e-62, Method: Composition-based stats. Identities = 79/319 (24%), Positives = 141/319 (44%), Gaps = 22/319 (6%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 ++ ++DLNLL+ L L+ ER VT+A +RI +T AVS +L +LR F D + + +PLG+ Sbjct: 1 MNLRSIDLNLLVILDALLAERQVTRAGQRIGLTQPAVSNALGRLRYVFKDEILMRTPLGM 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQT--PRGLKFELAAESPLMMIMLNALSKQIY 120 TP ++ + + +Q L + +F L +++ L + I Sbjct: 61 ELTPRAKALACPIRQILQQIEELFVPENQFDSFTSDRRFTLRMSDLTELLLPPPLLRNIR 120 Query: 121 QRYPQATIKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 P + + + + D +++A+ G +D+ H P AI +VLF D Sbjct: 121 GTAPHIRMNVMHLNADKTVEALDSGRLDMAVCAGLDH----------PDAISSQVLFQDR 170 Query: 180 PCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFE 239 L + HP ++ L+ F +++ D+ +D +L ++ R IA ++P + Sbjct: 171 LVCVLSRRHPDANRPLTLERFAALDFLNVSINPVDSSLIDTMLADMRFTRRIAFNVPHWL 230 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 M D L LA ++ H L L L E V +TL WH+R Sbjct: 231 VVPSML---DALPLAV------IMSERHALSLGDSRLAIRELPLDLEPVTWTLYWHRRYD 281 Query: 300 HNPKIVWLRETIKNLYASM 318 ++ WLR I ++ ++ Sbjct: 282 NSVAHEWLRNCITDVVDAI 300 >UniRef50_A6FY23 Transcriptional regulator, LysR family protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6FY23_9DELT Length = 339 Score = 240 bits (614), Expect = 4e-62, Method: Composition-based stats. Identities = 68/303 (22%), Positives = 126/303 (41%), Gaps = 21/303 (6%) Query: 21 QERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSMEQNLAEWMQ 80 Q SVT AA+R+ ++ AVS +LA+LR F DPL V + G+ TP + + + + Sbjct: 21 QTSSVTGAARRLGLSTPAVSHALARLRERFGDPLLVRAGRGMVLTPRAEQLRPRVRDALS 80 Query: 81 MSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQIYQRYPQATIKLRNWDYDSL 138 ++ L+ + P P F L+ ++ + ++ P +++ D Sbjct: 81 LATLVFEDPGAFEPASMERSFTLSMTDYVLRVFGGPFEARVRAAAPGVDLRVIVNAVDDA 140 Query: 139 DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPAL---HQTW 195 + + G+ D+ + +LP + + S+ +R+ HP L + Sbjct: 141 ERLRAGDTDLVVG----------IYGALPPELRTRAIISERLVCVVREAHPVLAPTKRRL 190 Query: 196 NLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQPDNLLLAT 255 L F+ H+ I +D+ L ELG R +A ++P F+ +L M A D LL Sbjct: 191 TLRQFVTLEHVQIAPRGQPGGYVDDRLAELGHARRVARAVPFFQLALEMTASSDYLL-TV 249 Query: 256 APRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWLRETIKNLY 315 + R + L ++ P S+ +++WH R + WLRE + Sbjct: 250 SERIARQLGPELGLRVLEPP-----SELGLEPYALSMVWHPRFDADAGHRWLREQLVEST 304 Query: 316 ASM 318 ++ Sbjct: 305 QAL 307 >UniRef50_B7V4S2 Probable transcriptional regulator n=7 Tax=Pseudomonas aeruginosa RepID=B7V4S2_PSEA8 Length = 304 Score = 240 bits (613), Expect = 5e-62, Method: Composition-based stats. Identities = 71/316 (22%), Positives = 127/316 (40%), Gaps = 20/316 (6%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 + +DLNLL+ L L+ ER V++AA+R+ ++ AVS +L +LR F DPL V + Sbjct: 5 HDLRRIDLNLLVVLDALLSERHVSRAAQRLAMSQPAVSHALGRLRELFGDPLLVRVKSRM 64 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGLK-FELAAESPLMMIMLNALSKQIYQ 121 T L + + L + ++ P + R + F L ++L AL +Q Sbjct: 65 QLTSLALELAPKLQASLDQVRGVIGGPTFEPVRSRRHFRLGMSDYGAWVVLPALLRQQQA 124 Query: 122 RYPQATI-KLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 P + ++ ++ + G++D + LP + LF + Sbjct: 125 LAPGVSFGIVQEPRLETARQVAEGQLDCALG----------VFPLLPEGVRARRLFEERF 174 Query: 181 CVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQ 240 R+ +LD +L H+ + + + +D+ L++ G R +A++LP F Sbjct: 175 VCVCRRSLFDRPDGLSLDRYLAARHVRVSLQDNPAEEVDSALEKRGLRRQVALTLPHFTV 234 Query: 241 SLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 + + A D L+L A R + +L L PL + +W Sbjct: 235 APALLAGTD-LVLTIAERTLERLRLPEELALCEPPLAIP-------RFDYVQIWRGDAER 286 Query: 301 NPKIVWLRETIKNLYA 316 WLRE I+ Sbjct: 287 EAAGAWLREQIQAAAR 302 >UniRef50_Q0ARX0 Transcriptional regulator, LysR family n=1 Tax=Maricaulis maris MCS10 RepID=Q0ARX0_MARMM Length = 334 Score = 240 bits (612), Expect = 7e-62, Method: Composition-based stats. Identities = 66/314 (21%), Positives = 129/314 (41%), Gaps = 21/314 (6%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 S+ +DLNLL+ L ER+VT+AA+R+NV+ VS +L++LR F D LF+ +P G+ Sbjct: 4 MSLKHVDLNLLITFDALWHERNVTRAARRLNVSQPTVSNALSRLRLAFGDQLFLRAPRGI 63 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQIY 120 PT + +++ E ++ LD + +F + + +L L + Sbjct: 64 EPTERCSEIIKDVREALRHIEQALDSGPAFDAKQCRREFHIGCADYFDLFVLPDLLAYMA 123 Query: 121 QRYPQATIKLRNWD-YDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 + P ++LR+ D + +D + GE+D + + + Sbjct: 124 EHAPMIDLRLRSVDIEEGMDLLDAGELDFMMHMEFPAAKR----------FGVRPVLHER 173 Query: 180 PCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFE 239 R HP + + ++ TF H++ +D VL LG R +A++ Sbjct: 174 HVFATRAGHPLVREAPDIATFASLSHVNFSQRGDSESPVDEVLARLGYRRRVAITTQHMT 233 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 + D L+ + R + + +P +++ P + W++R Sbjct: 234 TVAHLVKTTD-LVASVPSRMAARMVEEGGFAVYPIPFQIEKA-------PVAVYWNRRFE 285 Query: 300 HNPKIVWLRETIKN 313 + + W+R+ I Sbjct: 286 LDGAMRWMRDAIIE 299 >UniRef50_A0KH33 Transcriptional regulator, LysR family n=2 Tax=Aeromonas RepID=A0KH33_AERHH Length = 313 Score = 240 bits (612), Expect = 7e-62, Method: Composition-based stats. Identities = 72/307 (23%), Positives = 130/307 (42%), Gaps = 19/307 (6%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 + +LNLL L++L++ R++++AA+ ++++ ++SK L +LR+ F D L V Sbjct: 1 MHKANLNLLPTLKVLLETRNISRAAELLHLSQPSISKQLGQLRSEFGDELLVREGQRWLL 60 Query: 65 TPLMVSMEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQIYQRY 123 TP ++ LA+ + L + P R F LA+ + +L + + + Sbjct: 61 TPRAEALAAQLADSLGALERLYEAPGFDPSRCERVFRLASSDYVAQHILPDICAALAREA 120 Query: 124 PQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVW 183 P A ++ WD L + + E+D+ + E P L D V Sbjct: 121 PLAALEYSLWDKRLLPQLWQSELDMVSTITELVPDQIRGLHQ----------GEDRLVVL 170 Query: 184 LRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 + HP ++ +LD +L +PH+ + ++ VL G R +P F+ ++ Sbjct: 171 MGSHHPLAGRSLSLDDYLAWPHLQVSGGGDKDSPVEQVLAPQGLSRRWFARVPFFQAAVE 230 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 + + D LL T + H L LP Q + LLWH+R+ +P Sbjct: 231 VLLRTDCLL-TTPAHIAWQLSCEHALHFCDLPFASRTQQ-------YHLLWHQRHHQDPA 282 Query: 304 IVWLRET 310 W RE Sbjct: 283 HKWFREL 289 >UniRef50_Q5LKP3 Transcriptional regulator, LysR family n=1 Tax=Ruegeria pomeroyi RepID=Q5LKP3_SILPO Length = 324 Score = 239 bits (611), Expect = 7e-62, Method: Composition-based stats. Identities = 75/318 (23%), Positives = 131/318 (41%), Gaps = 22/318 (6%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 + LDLNLL+ + + +++ AAKR+NV+ +S +LA+LR DPLF+ S G+ Sbjct: 1 MDLRKLDLNLLVTFEAIYTAGNISHAAKRLNVSQPTISNALARLRDTVGDPLFIRSGRGV 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGLK--FELAAESPLMMIMLNALSKQIY 120 +PTP M + + +QM P + F + L I++ L + + Sbjct: 61 APTPRATGMIGPVRDALQMIQSGFGDDERFDPSTTRRNFRIVVLDMLEPILMPPLVRAV- 119 Query: 121 QRYPQATIKLRN-WDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 Q Y T+++ D+ + + G +D+ + + E E + + Sbjct: 120 QDYRSVTLEMLPVMDFPIAEGLNDGSLDLALTTFDPQHGDIEC----------EQVGAAK 169 Query: 180 PCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFE 239 + RK HP + H+++ + +D VL+ +R I + F Sbjct: 170 IVIVARKGHPRIKGEMTPALVSEIGHVALIPKIRALSRVDEVLRYAKIDRHIVYMVTRFW 229 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 + A D L+A P + L PL P+PF+ +Q ++W KR+ Sbjct: 230 SFPHILANSD--LIAMMPGDFAAHAALF-YPLDIFPVPFEFPEQH-----IYMIWKKRHG 281 Query: 300 HNPKIVWLRETIKNLYAS 317 +P WLRE I Y Sbjct: 282 LDPGHTWLREKIVEAYRE 299 >UniRef50_Q1N663 Regulatory protein, LysR:LysR, substrate-binding n=1 Tax=Bermanella marisrubri RepID=Q1N663_9GAMM Length = 306 Score = 239 bits (611), Expect = 7e-62, Method: Composition-based stats. Identities = 72/311 (23%), Positives = 129/311 (41%), Gaps = 20/311 (6%) Query: 7 TLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTP 66 +DLNL + + E S+T+AA+R+N+T A+S +L++LR DDPLFV + PTP Sbjct: 2 KIDLNLFTVFEAIYLEGSLTRAAERLNLTQPAISHALSRLRERLDDPLFVRQGHKMRPTP 61 Query: 67 LMVSMEQNLAEWMQMSNLLLDKPHHQTPRGL--KFELAAESPLMMIMLNALSKQIYQRYP 124 L + ++ ++ N L + HH P + +A + +L + K + P Sbjct: 62 LAQKLIPDIQAALRQLNGALQQSHHFNPAEAEKTYRVAMRDVMEATLLPPVLKGLDNIAP 121 Query: 125 QATIKLRNWDYDSLDA-ITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVW 183 + + + +++ + GE+D ++L I + L +D V Sbjct: 122 NIQLASVHIERRDMESKLASGELDFVV----------DVLLPTSEQIYKKKLLNDELVVI 171 Query: 184 LRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 L + + + +LR HI + S +D L G R +A+ + + Sbjct: 172 YNPALSQLPEGFTEEEYLRAKHILVSTRASGPSLVDYALSAEGLNRNVALRCQHYYAACQ 231 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 +A DN +L T P H L LPF K + L WH+ + + Sbjct: 232 VA--SDNGMLLTMPSRYASILLQHFPTLQRSSLPF-----KTSSIDVYLYWHESLNEDGA 284 Query: 304 IVWLRETIKNL 314 W R+ ++ + Sbjct: 285 NAWFRDMLQQV 295 >UniRef50_B8KV86 Putative transcriptional regulator, LysR family n=1 Tax=gamma proteobacterium NOR51-B RepID=B8KV86_9GAMM Length = 302 Score = 239 bits (611), Expect = 8e-62, Method: Composition-based stats. Identities = 63/318 (19%), Positives = 138/318 (43%), Gaps = 23/318 (7%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 ++ ++DLNLL ++ E ++T AA +I ++ A+S +L +LR DD LFV++ G+ Sbjct: 1 MNLRSVDLNLLTIFDAIVSEGNLTHAADKIGMSQPAISAALGRLRVTLDDELFVSTGRGV 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTP--RGLKFELAAESPLMMIMLNALSKQIY 120 PT + +++ + ++ L P F +++ ++++ L + + Sbjct: 61 KPTQRALQLQEPVRRILEDVRAALTSTGEFDPESSDRVFTISSIDYGGIVVIPRLLRYLQ 120 Query: 121 QRYPQATIKLRN-WDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 ++ + + ++ + R D+ + L + ++L ++ Sbjct: 121 KQQSPIIVNINPSQTGEAHRDVDRSSGDLTITSDPL----------LSPDHECKLLRREL 170 Query: 180 PCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFE 239 P RKDHP + + +++ F R H+ + + ALD L +LG R +P F Sbjct: 171 PYCLARKDHPDITGSLSVEQFQRNRHVLLYSNNTRGLALDAHLLQLGFNRECGARVPSFF 230 Query: 240 QSLFMAAQPDNLLLATAPR-YCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRN 298 ++ D ++ T PR + + + L ++A P + ++WH+ Sbjct: 231 NMPYIVGNTD--MICTMPRQMAEDFARQFGLQVLAAPF-------DNWTASYFMVWHRSF 281 Query: 299 SHNPKIVWLRETIKNLYA 316 + + WLR++I L + Sbjct: 282 NGDSGHCWLRDSIFRLCS 299 >UniRef50_C6BS61 Transcriptional regulator, LysR family n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6BS61_DESAD Length = 310 Score = 239 bits (611), Expect = 9e-62, Method: Composition-based stats. Identities = 83/320 (25%), Positives = 140/320 (43%), Gaps = 21/320 (6%) Query: 2 KKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLG 61 K + + LDLNLL+ L + ERS+T A ++ +T SAVS +L+KLR FDD LFV Sbjct: 3 KTNSSNLDLNLLVILDTIFTERSLTLAGNKLFMTQSAVSHALSKLRHHFDDRLFVRRGNI 62 Query: 62 LSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQI 119 + PTPL ++ QN+A ++ N L P F L L ++L + + I Sbjct: 63 MEPTPLCKTIHQNIAPSLKAINQSLADRGEFDPASSKRTFSLGLSDYLCKLLLPEILRLI 122 Query: 120 YQRYPQATIKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSD 178 R +I++ Y+ + + G++D+ + + E LF D Sbjct: 123 DSRALGISIRIMQTTYEKREEMLQSGKLDVFLGCP----------RNYGAGVLKEKLFED 172 Query: 179 VPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEF 238 +R DHP + N + ++ +S L++ L G +R I + L + Sbjct: 173 REVCVVRNDHPIKGEVMNEEEMAENEFAALSLSESGLGFLEDYLYRKGVQRKIKIVLQQE 232 Query: 239 EQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRN 298 + NL+ + A R + Y +L +V +PL + E + WH N Sbjct: 233 TVIPSLVENS-NLVGSIAQRLAEMYAAKGRLRIVHMPL-------ENTEFEVSQHWHSLN 284 Query: 299 SHNPKIVWLRETIKNLYASM 318 ++P W+R IK + A++ Sbjct: 285 DNDPAQQWIRSVIKEVAATL 304 >UniRef50_D0RY94 Transcriptional regulator n=4 Tax=Acinetobacter RepID=D0RY94_ACICA Length = 311 Score = 239 bits (611), Expect = 9e-62, Method: Composition-based stats. Identities = 75/322 (23%), Positives = 145/322 (45%), Gaps = 24/322 (7%) Query: 1 MKKS---ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVN 57 M + + +DLNL + +E+++T+A++++ ++ AVS +LA+LR F+DPLF+ Sbjct: 4 MNNNVASLARIDLNLFRVFVTIYKEKNLTRASEQLFLSQPAVSHALARLRDHFNDPLFIR 63 Query: 58 SPLGLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNAL 115 G+ P+PL + + + +Q+ + + + P +A I L ++ Sbjct: 64 DGHGVVPSPLAKRLWPKIEQSLQLMHQAIQSTYDFVPARDLKHLTIAMNDEYEGIFLPSI 123 Query: 116 SKQIYQRYPQATIKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEV 174 + + Q P + D +L ++ G++D ++ S+ +I YE Sbjct: 124 IQHLTQFNPNLQLNSVRIDRKNLRHELSTGKIDFAI----------DVQHSVEDSIGYEC 173 Query: 175 LFSDVPCVWLRKDHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAM 233 D V RK HP L T + +L HI++ + D L + G +RTI+ Sbjct: 174 CTKDQFVVISRKQHPLLSSTDLTKEIYLDAKHITVSSRPTGRVFEDFFLSKQGIKRTISF 233 Query: 234 SLPEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLL 293 ++E ++ + Q D+LL T P+ Y + + + PLP D + + L Sbjct: 234 RCQQYETAIRLITQTDHLL--TIPQCQIAYFKDNYPQIKVHPLPIDIAGYQ-----MNLY 286 Query: 294 WHKRNSHNPKIVWLRETIKNLY 315 W ++ SH +IVW + + + Sbjct: 287 WDQQKSHEHQIVWCKAQLLQIM 308 >UniRef50_B4ELV6 LysR family regulatory protein n=1 Tax=Burkholderia cenocepacia J2315 RepID=B4ELV6_BURCJ Length = 306 Score = 239 bits (609), Expect = 2e-61, Method: Composition-based stats. Identities = 69/300 (23%), Positives = 125/300 (41%), Gaps = 19/300 (6%) Query: 22 ERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSMEQNLAEWMQM 81 ERSVT+A R+ +T A S++L +LR D + V +P GL TP S+ Q ++ + Sbjct: 23 ERSVTRAGMRLGLTQPAASRALGRLRTLLHDRVVVRTPKGLEFTPRAASLAQRVSRVLTE 82 Query: 82 SNLLLDKPHHQTPRGLK--FELAAESPLMMIMLNALSKQIYQRYPQATIKLRNWDYDSLD 139 + ++ P P + F +A+ + + ++ ++ ++ + P + + ++++ Sbjct: 83 AAGIV-APAVFDPATARGLFSIASLDHMALTLIPDVNARLERSAPGLDLDVPPSRSNNVE 141 Query: 140 AITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPALHQTWNLDT 199 +T G I + +LP I L+ D +R HPAL Sbjct: 142 LVTDGTAGIALGVFDDD--------TLPAGIYRRKLYDDNLVCIVRNGHPALSARLTPKR 193 Query: 200 FLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQPDNLLLATAPRY 259 F H+ + +D L G R IAM LP F + + A+ D L+ R Sbjct: 194 FAALSHVLVTIGGRGGELVDAALARQGLHRRIAMRLPHFLVAPMVVAKSDMTLV-LPQRL 252 Query: 260 CQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWLRETIKNLYASMA 319 ++ + LV LP+ +++WH+R +P WLR+ I + M Sbjct: 253 ARHVALSMPVTLVKLPVEVPSFSP-------SMIWHERTHDDPAHGWLRQQIVEVAREMG 305 >UniRef50_C5CZY6 Transcriptional regulator, LysR family n=1 Tax=Variovorax paradoxus S110 RepID=C5CZY6_VARPS Length = 325 Score = 238 bits (608), Expect = 2e-61, Method: Composition-based stats. Identities = 78/325 (24%), Positives = 136/325 (41%), Gaps = 24/325 (7%) Query: 1 MKKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPL 60 M +S +D++LL L L+ ERSV++AA R+N T A+S +L +LR F DP+ V Sbjct: 1 MTRSQDLVDIHLLRVLAALVAERSVSRAAVRMNQTQPAISAALRRLRDAFGDPILVRERG 60 Query: 61 GLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTP--RGLKFELAAESPLMMIMLNALSKQ 118 G+ PT + + ++ E + + +L P P + F +A L + + + Sbjct: 61 GMVPTARALQLRESAREVLGEIDRMLAGPERFEPGASTMTFTIATPDYLAASFMAEVVAR 120 Query: 119 IYQRYPQATIKLRNW--DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLF 176 PQA + + YD A+ +GE+DI P L +L Sbjct: 121 FRAEAPQARLLIHPLTPGYDYERALAQGELDIVIGNWPLPPERMHL----------SLLI 170 Query: 177 SDVPCVWLRKDHPALH-QTWNLDTFLRYPHISICW-EQSDTWALDNVLQELGRERTIAMS 234 D + +P L +L H+ +S +D+ L L + R + Sbjct: 171 EDELVCMMSPGNPLAAPGAMTLQRYLAAAHVVPTPFAKSHRAVVDSHLAGLRQTRDARVF 230 Query: 235 LPEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLW 294 +P + + ++ A+ D L+ TA + + + + + VA P F + F LW Sbjct: 231 VPYYAMAPYLVAESD-LVFTTARHFAEQFTRSLPVVSVAAPEGFPRMR-------FYQLW 282 Query: 295 HKRNSHNPKIVWLRETIKNLYASMA 319 H+R+ H WLR + + +A Sbjct: 283 HERSQHQGAHRWLRSLLSTVGGHLA 307 >UniRef50_Q687Z9 LysR-type activator n=1 Tax=Sphingopyxis macrogoltabida RepID=Q687Z9_9SPHN Length = 318 Score = 238 bits (608), Expect = 2e-61, Method: Composition-based stats. Identities = 63/307 (20%), Positives = 123/307 (40%), Gaps = 22/307 (7%) Query: 14 LCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSMEQ 73 +M +R V+ AA+ + +T VS +L +LR DD LF +P G+ PT + + + Sbjct: 26 RIFHRMMVDRKVSAAAEALGITQPGVSNALKRLRDITDDELFTRAPGGMEPTAFAIQIAE 85 Query: 74 NLAEWMQMSNLLLDKPHHQTPRGLK--FELAAESPLMMIMLNALSKQIYQRYPQATI-KL 130 ++ + M + +P P + F L +L + + + P + + Sbjct: 86 PISYALAMVDAAFTQPTDFKPASDRRLFRLGLTDIGEAYLLPKILARTAEIAPHVSFTTI 145 Query: 131 RNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPA 190 R + + + G +D+ ++ ++ + L + + +RKDHP Sbjct: 146 RPPKSEIREEMEVGSLDLAI----------DVFPNMKGNFVHRRLLKEKHVICMRKDHPL 195 Query: 191 L-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQPD 249 W + ++ H+ + + + +D +L G R I + LP F + + Sbjct: 196 ANKAEWTMADYIAQEHVVVIAQGTGHGDIDALLARKGISRNIRLMLPHFLSLGPVMHATN 255 Query: 250 NLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWLRE 309 L+AT P + L++LP P V + WH+R +P VWLR Sbjct: 256 --LVATLPEDAALLLE-EPYELISLPFP-----GILPIVHVDVFWHRRLHRDPANVWLRN 307 Query: 310 TIKNLYA 316 + L++ Sbjct: 308 LVYELFS 314 >UniRef50_A6GJJ5 Regulatory protein, LysR:LysR, substrate-binding n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GJJ5_9DELT Length = 304 Score = 238 bits (607), Expect = 2e-61, Method: Composition-based stats. Identities = 70/304 (23%), Positives = 133/304 (43%), Gaps = 21/304 (6%) Query: 19 LMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSMEQNLAEW 78 L++E +VT+AA+ + ++ A+S LA+LR FDDPL + S G+ PT + + + +A Sbjct: 2 LVREGNVTRAARALGISQPAMSHRLARLRERFDDPLLLPSGAGMQPTARALQLVEPVARG 61 Query: 79 MQMSNLLLDKPHHQTPR--GLKFELAAESPLMMIMLNALSKQIYQRYPQATIKLRNWDYD 136 + + L PR +F +A ++L +++ P+ +++ + Sbjct: 62 LLEFDAALRSEARFDPRTSTRRFTIACADFGDFVVLPRALSRLHAEAPEIEVRMCRPGPE 121 Query: 137 SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPALHQTWN 196 + RG +D+ G P + + +R DHPA+ + Sbjct: 122 LERGLERGLIDVAVLGNPCLPAA---------NFRQRRVLDGRFATTVRADHPAVGPRMD 172 Query: 197 LDTFLRYPHISI--CWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQPDNLLLA 254 LDTF+ PH++I E +D+ L +G R +A+ +P + + +A++ D +L A Sbjct: 173 LDTFVALPHLAIAPSSESDFGGVIDDALARVGEARRVAVRVPSYSTAPLLASRSDLVLTA 232 Query: 255 TAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWLRETIKNL 314 + + + L + PLP S ++WH+R P WLR T+ + Sbjct: 233 PVGVILEAASFV-SLRVFDPPLPIPPS-------DVRMVWHERWQREPGHAWLRTTLAEV 284 Query: 315 YASM 318 + Sbjct: 285 MTGL 288 >UniRef50_B7RV99 Transcriptional regulator, LysR family protein n=1 Tax=marine gamma proteobacterium HTCC2148 RepID=B7RV99_9GAMM Length = 303 Score = 238 bits (607), Expect = 3e-61, Method: Composition-based stats. Identities = 75/316 (23%), Positives = 137/316 (43%), Gaps = 25/316 (7%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 + +DLNL + L +ERSVT+ A+ +++T AVS +L++LR FDD LFV SP G+ P Sbjct: 3 LDKVDLNLFVVFDALYRERSVTRVAQALHLTQPAVSNALSRLRQSFDDQLFVRSPRGMQP 62 Query: 65 TPLMVSMEQNLAEWMQMSNLLLDKPHHQTP--RGLKFELAAESPLMMIMLNALSKQIYQR 122 TP+ ++ ++ + + + P + F L ++L L + Q Sbjct: 63 TPVAEAISVDVQKALGLLQKTTLSGQRFDPGSAEMTFRLGMSDVAQNMVLPGLHNALAQL 122 Query: 123 YPQATIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPC 181 P TI+ D ++ + G++D+ + + R L L S + Sbjct: 123 APGVTIEAYYLDRASAVAQLKSGDLDLLLDAPQVNARELGQL----------HLGSLLYR 172 Query: 182 VWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQS 241 V + K HP ++D +L H+ + +D L +G R + + + ++ + Sbjct: 173 VAMAKAHPLAQVDLDIDQYLAAKHVHVSARPRGRGQVDLALHAIGHRRKVVVRVQQYAVA 232 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 + AQ D LL TAP + +LH E+ + + L WH+ + + Sbjct: 233 AAITAQSD--LLWTAPGSVIDHPELH----------VVETPFQVESLVLNLYWHRSAAED 280 Query: 302 PKIVWLRETIKNLYAS 317 P W+R+ + +A Sbjct: 281 PANAWMRKMLAQQFAE 296 >UniRef50_A5W6Q9 Transcriptional regulator, LysR family n=12 Tax=Pseudomonas RepID=A5W6Q9_PSEP1 Length = 326 Score = 237 bits (606), Expect = 3e-61, Method: Composition-based stats. Identities = 75/317 (23%), Positives = 134/317 (42%), Gaps = 24/317 (7%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 +I+ DLNLL +L++E++V++AA+R+ +T VS +LA+LR DPL V + Sbjct: 26 MNISNFDLNLLRVFDMLLREQNVSRAAERLALTQPTVSNALARLRDQLGDPLLVRVGRRM 85 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQIY 120 PTP +++E + +Q L P+ + +A + + + L ++ Sbjct: 86 RPTPRALALEGPIRAALQQIEQTLGTGDGFEPQRSHRQLRIALTDFVEQLCMPPLLARLE 145 Query: 121 QRYPQATIKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 P I + + + +A+ RG++D+ +P + Sbjct: 146 LLAPNVRIDVVHLAPNLPAEALDRGDLDLVLGR----------FDEVPARFTRHPWRRET 195 Query: 180 PCVWLRKDHPAL--HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPE 237 + LR+ HP L Q +LD FL HI + +D L E G R IA + P Sbjct: 196 LQIALRQQHPHLVPGQALDLDAFLGLRHIWVH-GGQTRGMVDQWLAEQGLTRQIAYTTPN 254 Query: 238 FEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKR 297 + Q+ +AA D + + + Q + L L + LP + + + + + Sbjct: 255 YLQAAHLAAATD-MCVVLPRQLAQQFAHLLPLAVYELPFALEPFELEVVHL-------SH 306 Query: 298 NSHNPKIVWLRETIKNL 314 H+P + WL E I L Sbjct: 307 RQHDPALAWLVEQILTL 323 >UniRef50_B7RYN1 Transcriptional regulator, LysR family protein n=1 Tax=marine gamma proteobacterium HTCC2148 RepID=B7RYN1_9GAMM Length = 303 Score = 237 bits (606), Expect = 3e-61, Method: Composition-based stats. Identities = 71/320 (22%), Positives = 138/320 (43%), Gaps = 25/320 (7%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 ++ ++DLNLL ++ E SVT+AA++I ++ A+S +L + R D LF + GL Sbjct: 1 MNLRSVDLNLLTVFDAVITEGSVTRAAEKIGMSQPAMSIALTRFRHIAKDELFERTGRGL 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQT--PRGLKFELAAESPLMMIMLNALSKQIY 120 PTP + + + + + L+ F + ++ML L +++ Sbjct: 61 RPTPRALELAAPIRRALDIVTDALEHGTDFDMSRSDRSFSVVLSGIGEIVMLPTLMRRLE 120 Query: 121 QRYPQATIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 + I R+ D L + G VD+ ++ I + + Sbjct: 121 STGSRININTRHVAHGDMLKEMHFGNVDL----------YMWIVPIESSEIICTQIGNTS 170 Query: 180 PCVWLRKDHPALHQTWNLDTFLRYPHISICWEQS-DTWALDNVLQELGRERTIAMSLPEF 238 +R DHP + + +++ F H++ + +D L LG +R +MS+ + Sbjct: 171 EVCLVRADHPYVGDSLSVNEFAALRHVTFHMPGTYGPSIIDRELWRLGLKREHSMSVHSY 230 Query: 239 EQSLFMAAQPDNLLLATAPRYC-QYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKR 297 + + +Q D ++ T PR +++ ++H L +V PL +LE P +LW K Sbjct: 231 FDAPRVLSQTD--MVCTMPRVLGRHFARVHGLKMVRSPL--------QLEFPVFMLWPKA 280 Query: 298 NSHNPKIVWLRETIKNLYAS 317 + WLRET+ +++ Sbjct: 281 AEKDKGHQWLRETLIDIFKQ 300 >UniRef50_D0LUZ7 Transcriptional regulator, LysR family n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LUZ7_HALO1 Length = 306 Score = 237 bits (605), Expect = 4e-61, Method: Composition-based stats. Identities = 69/316 (21%), Positives = 133/316 (42%), Gaps = 22/316 (6%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 I +D NLL+ L L++E SVT+AA R+ +T SA+S +L +LR DPL V + + Sbjct: 3 IYGIDANLLVSLDALLREASVTRAAHRVGITQSAMSHALGRLRDHLGDPLLVRAGRNMVL 62 Query: 65 TPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGLK--FELAAESPLMMIMLNALSKQIYQR 122 T S+ ++ ++ + + P L+ F L A +++ + + + Sbjct: 63 TAKAESLAPRVSVLVEEMSRVFAPDEEFEPAALRRGFALRATDHAQFVLMPEVDRLLRAE 122 Query: 123 YPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCV 182 P + + ++ + + + D+ HP I + L +D Sbjct: 123 APGVDLVVTALSGGAVAPLRQAQSDLTLGTFSDHPSD----------IHSQALLTDRFVC 172 Query: 183 WLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 +R DHPA+ + + + HI + Q +D VL ELG R I+ +P + Sbjct: 173 LVRGDHPAIARGLGVAQYAAMTHIHVGPAQ--LGVVDRVLGELGIARRISRVVPHVLVAP 230 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 + A D ++ + R Q ++ ++ P+P ++ WH+R+ +P Sbjct: 231 LLIADSDA-VVTMSERLAQRALPGAEVAMLEPPVPLP-------PCTLSMAWHERHDADP 282 Query: 303 KIVWLRETIKNLYASM 318 WLR+ + + + Sbjct: 283 AHRWLRDAVLRAASHL 298 >UniRef50_A4GJC2 Transcriptional regulator LysR family protein n=1 Tax=uncultured marine bacterium EB0_49D07 RepID=A4GJC2_9BACT Length = 303 Score = 237 bits (605), Expect = 4e-61, Method: Composition-based stats. Identities = 70/323 (21%), Positives = 136/323 (42%), Gaps = 28/323 (8%) Query: 1 MKKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPL 60 MK I++ DLNL + + + E S+TKAA+ + +T AVS +L++LR FDD LFV + Sbjct: 1 MK--ISSFDLNLFVIMNSIYTEGSLTKAAEVVGITQPAVSNALSRLREKFDDELFVRTGS 58 Query: 61 GLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTP--RGLKFELAAESPLMMIMLNALSKQ 118 G+ PT ++ Q++ +Q+ +++P P F ++ +L L + Sbjct: 59 GMVPTQKTENIIQDIQNALQLMQKSVNEPDEFNPKTSERTFRISLGDINEGRILAILMSK 118 Query: 119 IYQRYPQATIKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFS 177 I + P I+ D + A+ E+ + + + +FS Sbjct: 119 IGKSAPHVKIESYYSARDQVPHALATNELSFAVDPFIPNSKDTNSM----------KVFS 168 Query: 178 DVPCVWLRKDHPALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLP 236 D V R +H + NL+ L+ +I+I + ++ +Q++ + +A+ Sbjct: 169 DKFVVAHRANHDVSKIENLNLEEMLKLKYINISNRKRGASVVEMEMQKMQLQPEMALRAQ 228 Query: 237 EFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHK 296 + + + D LL + + + H L V LP +Q L+WH Sbjct: 229 HYLVTPEIVRSSDLCLLC-----AETFAKKHGLSYVELPFKVPALEQ-------YLIWHN 276 Query: 297 RNSHNPKIVWLRETIKNLYASMA 319 + ++ +W+R I + + Sbjct: 277 SDDNDGSHIWMRNLIAESFKEVG 299 >UniRef50_Q5LN55 Transcriptional regulator, LysR family n=4 Tax=Rhodobacterales RepID=Q5LN55_SILPO Length = 331 Score = 237 bits (604), Expect = 5e-61, Method: Composition-based stats. Identities = 80/327 (24%), Positives = 127/327 (38%), Gaps = 30/327 (9%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 + T DLNLL L L+ RS T+A +++ ++ AVS +L++LR DPLF+ L Sbjct: 1 MNFRTFDLNLLRVLDALLSTRSTTRAGQQLGMSQPAVSAALSRLRHALGDPLFIRQGRQL 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTP--RGLKFELAAESPLMMIMLNALSKQIY 120 PT + L + + + LL P L+ +++ L++ + Sbjct: 61 VPTDYAGGLHAPLRDLLGQTEALLAGQPDFDPGAATDSLTLSGSDFYAELLMPRLARHLS 120 Query: 121 QRYPQATIKLRNWDYDS-LDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 P ++L + D+ + ++ + VD+ + P ++ L S Sbjct: 121 HVAPGMRVQLVDLVPDNYVQSVGQSAVDMAILPA----------TPTPDWVEERRLHSSH 170 Query: 180 PCVWLRKDHPAL-------HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIA 232 R DHP + LD F H E D L +GR R + Sbjct: 171 FLAVARADHPEIASAAIAPGAVLPLDLFCSLQHALFSPEGKLHGLGDAALARIGRARQVT 230 Query: 233 MSLPEFEQSLFMAAQPDNLLLATAPR-YCQYYNQLHQLPLVALPLPFDESQQKKLEVPFT 291 M+LP F L +Q D L+A P + L L P+P V Sbjct: 231 MTLPVFSGVLNAVSQSD--LIALIPHQLAESVAPRLGLSLYHPPIPV-------GPVEIM 281 Query: 292 LLWHKRNSHNPKIVWLRETIKNLYASM 318 ++WHKR S P WLR+ I L A + Sbjct: 282 MVWHKRASTAPAHRWLRDQIAMLMAEL 308 >UniRef50_A1U2R6 Transcriptional regulator, LysR family n=3 Tax=Marinobacter RepID=A1U2R6_MARAV Length = 300 Score = 237 bits (604), Expect = 6e-61, Method: Composition-based stats. Identities = 75/315 (23%), Positives = 132/315 (41%), Gaps = 22/315 (6%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 ++ DLNLL + +E S+T+AAK +++T A+S SLA+LR F+DPLF + Sbjct: 1 MALNRPDLNLLHVFDTIYREGSLTRAAKALHLTQPAISHSLARLRDHFNDPLFTRQGNQM 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFE--LAAESPLMMIMLNALSKQIY 120 PTPL +++ + +++ H P + L L L L ++ Sbjct: 61 VPTPLARRFLESMRPGLNQIQSAVNQFHAFDPASQRKTYALGLRDVLESTFLPQLISKLA 120 Query: 121 QRYPQATIKLRNWDYDSLD-AITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 YP ++ + ++ + G++D ++L + +E+L D Sbjct: 121 P-YPDMEVQSQRVARRDMETQLAAGKLDFAI----------DVLLPVSNQTSHELLRQDR 169 Query: 180 PCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFE 239 V RK HP + Q ++ ++L HI + D L G +RTI + + Sbjct: 170 LVVLARKGHPVIAQGLDMASYLEARHILVSSRAEGPGIEDFELSRHGAQRTIRLRCQHYY 229 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 + + D LLL Y + Q + ++A P+ + L WHK Sbjct: 230 AACRVVESSD-LLLTMPETYARIIAQNTDIEVLAPPVEMP-------SIDVHLYWHKAYE 281 Query: 300 HNPKIVWLRETIKNL 314 P +VW R+ ++NL Sbjct: 282 QEPALVWFRDLLRNL 296 >UniRef50_A6CYZ8 Hypothetical transcriptional regulator, LysR family protein n=1 Tax=Vibrio shilonii AK1 RepID=A6CYZ8_9VIBR Length = 304 Score = 237 bits (604), Expect = 6e-61, Method: Composition-based stats. Identities = 82/312 (26%), Positives = 138/312 (44%), Gaps = 22/312 (7%) Query: 9 DLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLM 68 +LNLL L++L+ E+ V++AA+R+N+T SAVS+ L++LR + DPL V + TP Sbjct: 6 NLNLLYTLEVLLAEKHVSRAAERLNLTQSAVSRQLSQLRDIYHDPLLVRNGNHYVLTPRA 65 Query: 69 VSMEQNLAEWMQMSNLLLDKPHHQTPR--GLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + L + Q +L + P F ++ + +L L + + P Sbjct: 66 ERLGAELEDLFQNITKVLGQA-DFDPLLFDQTFTFSSSDYVAQYILPELVELLSSLAPTM 124 Query: 127 TIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRK 186 R W+ D+L ++ E+D+ + +L PL + + + D+P + RK Sbjct: 125 QFAYRLWEPDNLAKLS--EIDVQLAST--------MLPEAPLGLSSQQIGEDIPVIVTRK 174 Query: 187 DHPALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMA 245 +HP +T YPHI I LD ++ +R I +S P F + + Sbjct: 175 NHPLSGTKTITEQELGAYPHIRISGGGDKDSFLDREMKARSLKRRILVSTPFFSSAFALL 234 Query: 246 AQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIV 305 Q D LL T P + N L + +PF K + L+WH + H P + Sbjct: 235 QQTDALL--TVPLHIAV-NLKKTQKLHVIDIPFTVPTYK-----YWLIWHPKYDHEPAHI 286 Query: 306 WLRETIKNLYAS 317 W RE + ++ S Sbjct: 287 WTREHVLSIMRS 298 >UniRef50_B2JFW9 Transcriptional regulator, LysR family n=39 Tax=Burkholderia RepID=B2JFW9_BURP8 Length = 342 Score = 236 bits (603), Expect = 7e-61, Method: Composition-based stats. Identities = 77/318 (24%), Positives = 130/318 (40%), Gaps = 23/318 (7%) Query: 2 KKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLG 61 + + +LD+ L+ L+ L+ ERSVT+ A R+N T A+S +L KLR +DP+ V G Sbjct: 3 EDTAASLDIWLVRVLRTLLVERSVTQTALRLNQTQPAISTALRKLRETLNDPILVRGKSG 62 Query: 62 LSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTP--RGLKFELAAESPLMMIMLNALSKQI 119 + PT S+ + ++ + + P F +AA L + + Q Sbjct: 63 MVPTEYGESLLAAAQKVLRDVDFVATPHGDFDPARSRRTFRIAAPDYLNDFFMPTVIAQF 122 Query: 120 YQRYPQATIKLRNWDY--DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFS 177 + P A +++ + D A+ GE+D+ L + LFS Sbjct: 123 RETAPHARLEIESLGPLFDHTCALDAGELDLVIGNWPKP----------DLRFERSDLFS 172 Query: 178 DVPCVWLRKDHPALHQTWNLDTFLRYPHIS-ICWEQSDTWALDNVLQELGRERTIAMSLP 236 D +R DHP D +L PH++ + + A+D R I +LP Sbjct: 173 DTVVCMMRADHPLAKAPLTRDAYLAAPHLAPAHYSGARGGAIDTGFARARASRRIVATLP 232 Query: 237 EFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHK 296 F + Q D L+ T R+ +Y + L +V +P+PF + +WH Sbjct: 233 YFGLVPQVLLQSD-LIFTTTRRFALHYAAMLPLAVVDVPIPFPRIKC-------YQMWHP 284 Query: 297 RNSHNPKIVWLRETIKNL 314 + I WLR + + Sbjct: 285 QPDRPSDIAWLRGLMAQV 302 >UniRef50_Q8XRG7 Probable transcriptional regulator transcription regulator protein n=1 Tax=Ralstonia solanacearum RepID=Q8XRG7_RALSO Length = 308 Score = 236 bits (603), Expect = 8e-61, Method: Composition-based stats. Identities = 72/319 (22%), Positives = 127/319 (39%), Gaps = 23/319 (7%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 KS LDLNLL + + + R++T +R+ ++ AVS+ LA+LR + D LFV G+ Sbjct: 9 KSAPHLDLNLLELFESIWRTRNLTATGERLGLSQPAVSRGLARLRETYGDELFVRHRRGV 68 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKP-HHQTPRGLKFELAAESPLMMIMLNALSKQIYQ 121 PT ++ + ++ + + ++KP +F +A L L+ + Sbjct: 69 EPTAFAQTLAEPVSAALAIVRRTIEKPTFSAAEDARRFRVALSDIGERYFLPRLAAWLAD 128 Query: 122 RYPQATIKLRNWDYDS-LDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 PQ +I + + L + GE+D+ L L + + LF + Sbjct: 129 HAPQVSIDTVSASREELLTGLASGEIDLAVG----------FLPGLGKQVHEKRLFQEKF 178 Query: 181 CVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDT-WALDNVLQELGRERTIAMSLPEFE 239 R+DHP + PH+ + A++ VL +AM + F Sbjct: 179 VYIARRDHPGIDGRLQASQLRALPHVVGSPHGTQHAAAVEKVLTGPRVRAVVAMRVGSFL 238 Query: 240 QSLFMAAQPDNLLLATAPR-YCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRN 298 + A D L+A P ++ L L+A P+ F +++WH+R Sbjct: 239 SIGPIVADSD--LVAVVPSNLAALVSEHVGLQLIAPPVRFP-------SFEVSMVWHRRF 289 Query: 299 SHNPKIVWLRETIKNLYAS 317 +P WLR L+ Sbjct: 290 HGDPGGAWLRGVFSQLFGE 308 >UniRef50_A2SDX3 Transcriptional regulator, LysR family n=6 Tax=Burkholderiales RepID=A2SDX3_METPP Length = 326 Score = 236 bits (602), Expect = 1e-60, Method: Composition-based stats. Identities = 84/325 (25%), Positives = 134/325 (41%), Gaps = 29/325 (8%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 ++L+L+ L ++ ERSV++AA R+ T AVS L +LRA DPL V S G++P Sbjct: 7 FDKIELHLVRVLHTVITERSVSRAALRLRTTQPAVSAQLKRLRALVGDPLLVRSGTGMAP 66 Query: 65 TPLMVSMEQNLAEWMQMSNLLLDK-----PHHQTPRGLKFELAAESPLMMIMLNALSKQI 119 T + + + + AE ++ + L F +AA L L AL ++ Sbjct: 67 TAVALQLLEPAAELLRNAERLFGSRAEALAFDPAHSETTFRVAASDYLDPQFLPALVTRL 126 Query: 120 YQRYPQATIKLRNWD--YDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFS 177 P +++ +D + RGEVD+ P L L S Sbjct: 127 RAEAPGIRVEVLPLSAEFDYRKGLARGEVDLVIGNWLRPPAELHLGR----------LLS 176 Query: 178 DVPCVWLRKDHPALHQT--WNLDTFLRYPHISICW-EQSDTWALDNVLQELGRERTIAMS 234 D + +DHPA+ W + +L HI+ +D L LG R I + Sbjct: 177 DEIVCLVAEDHPAVKSPRSWTAERYLASEHIAPTPLHPGARGVIDEHLDALGLARDIVVR 236 Query: 235 LPEFEQSLFMAAQPDNLLLATAPRYCQYY-NQLHQLPLVALPLPFDESQQKKLEVPFTLL 293 P F M A L+L T +C Y QL L +V P+PF + + L Sbjct: 237 SPYFGLGPQMVAHS-RLVLTTGRLFCSRYVGQLPGLRIVRCPVPFPA-------LVYYQL 288 Query: 294 WHKRNSHNPKIVWLRETIKNLYASM 318 WH+ + + WLR ++++ + Sbjct: 289 WHELSHQSAAGRWLRGVMRDVARGL 313 >UniRef50_D1P5Q9 Transcriptional regulator, LysR family n=1 Tax=Providencia rustigianii DSM 4541 RepID=D1P5Q9_9ENTR Length = 305 Score = 235 bits (601), Expect = 1e-60, Method: Composition-based stats. Identities = 71/319 (22%), Positives = 143/319 (44%), Gaps = 22/319 (6%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 ++ LDLN L+ L +L++ER V++AA+ + + AVS +L +LR F DPL V Sbjct: 2 NNLRKLDLNQLVTLSVLLRERHVSRAAEALYKSQPAVSHALNQLRELFQDPLLVRRDGQY 61 Query: 63 SPTPLMVSMEQNLAEWM-QMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQ 121 T S+ L E + Q+ +L+ K + F +A ++ L + + Sbjct: 62 QLTSKAESLCIPLNEALNQLDDLIAQKQFNPLSCQRHFNIAMSDYGAALIAVKLVPYLRK 121 Query: 122 RYPQATIKLRNWDYDSLD-AITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 P +K+ + + + + G +D+ F + ++L ++ +++F+D Sbjct: 122 YAPDIDLKIWHCSREEMQNKLHEGSLDLAFG----------VFNTLDYSLRNQIVFTDKF 171 Query: 181 CVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQ 240 + +L ++ YPHI + + D +D+ LQ + ++R IA+++P ++ Sbjct: 172 VSIVDPQ-VCSQGKMDLIDWVSYPHILVSMKPFDANEIDHQLQLINQQRRIAVTVPYWQI 230 Query: 241 SLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 + + + L+ T + + + L PLP ++ F ++WH+R+ Sbjct: 231 APQLLMGTN--LILTLAQKAIPLSMSDKFTLFTPPLPLP-------DLVFQMIWHQRSDT 281 Query: 301 NPKIVWLRETIKNLYASMA 319 + + WLRETI L Sbjct: 282 DKAVYWLRETIVELLNEEG 300 >UniRef50_Q7MFJ9 Transcriptional regulator n=28 Tax=Vibrio RepID=Q7MFJ9_VIBVY Length = 314 Score = 235 bits (601), Expect = 1e-60, Method: Composition-based stats. Identities = 72/316 (22%), Positives = 134/316 (42%), Gaps = 20/316 (6%) Query: 4 SITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLS 63 ++ ++DLNLL L+ L+ + +++AA+ +N++ AVS++L +LR F DPL V Sbjct: 7 NLRSIDLNLLTILEKLLIHKHISQAAQALNMSQPAVSRALMRLREQFGDPLLVKVNREYR 66 Query: 64 PTPLMVSMEQNLAEWMQMS-NLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQR 122 T + + L + +L+D F + A MM+++ L + QR Sbjct: 67 LTAKGEYLRRELESSLNTIRQMLVDDAFDPLQYAGVFTIGALDFEMMMIVPKLLARFQQR 126 Query: 123 YPQATIKLRNWD-YDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPC 181 P+ +++ ++ Y L D+ + P + + LF+D Sbjct: 127 APKLKLQIVPYNAYMPLHDYLEKVADLLLYSTDDS----------PTNVFKQRLFNDNYA 176 Query: 182 VWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQS 241 V + ++H +Q L+ + R H+ + +D+ L+ ++R + SLP F Sbjct: 177 VVMCQNHVLANQPMTLERYCRSRHVIVSGNGLGKTDIDHELKRRNQQREVVASLPHFSMV 236 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 + D L+AT PR + H+ + LPF + WH + N Sbjct: 237 PELLINTD--LIATLPRRLVSH-LSHRYEITVAELPF-----YTADFQVEQFWHLIHHSN 288 Query: 302 PKIVWLRETIKNLYAS 317 P W+R+ IKN+ Sbjct: 289 PAHQWVRQEIKNMVDE 304 >UniRef50_C4KB22 Transcriptional regulator, LysR family n=37 Tax=Betaproteobacteria RepID=C4KB22_THASP Length = 333 Score = 235 bits (601), Expect = 1e-60, Method: Composition-based stats. Identities = 63/318 (19%), Positives = 119/318 (37%), Gaps = 19/318 (5%) Query: 2 KKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLG 61 + S+ DLNLL L + + SV++AA+ + ++ VS +L +LR +PLF+ + G Sbjct: 21 RMSLRDFDLNLLRVLLAVYEAGSVSRAAEHLGLSQPTVSSALGRLRRALGEPLFIKTASG 80 Query: 62 LSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGLK--FELAAESPLMMIMLNALSKQI 119 ++PT ++ + + P + +A ++ L + + Sbjct: 81 VTPTARTHALASSARAMLARLETDFFVADRFDPAKYEGNLTVALSDVGELVFLPRILDSV 140 Query: 120 YQRYPQATIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSD 178 + P A + + + A+ GEVD+ + E L Sbjct: 141 RRLAPLAMLDSVTLAPGELMRAMEDGEVDLAIGYYPDLDAA---------GFYREKLLDH 191 Query: 179 VPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEF 238 LR DHP + +L+ FL H ++ + + L+ L +R I + P F Sbjct: 192 RFVCLLRADHPVQDRQLSLERFLSLEHAAVRAKGRSQEIFEKYLERLRIQRRIVLRTPHF 251 Query: 239 EQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRN 298 + + D L+ T P +Y + P + WH+ Sbjct: 252 MSLPGIIGRSD--LVVTLPHAIGHYFTRVGEKVRMAEPPLAIPH-----IELYQHWHRGF 304 Query: 299 SHNPKIVWLRETIKNLYA 316 H+P+ WLR + L++ Sbjct: 305 HHDPRNRWLRTLVAGLFS 322 >UniRef50_A9FJR3 Transcriptional regulator, LysR family n=2 Tax=Sorangium cellulosum 'So ce 56' RepID=A9FJR3_SORC5 Length = 306 Score = 235 bits (601), Expect = 1e-60, Method: Composition-based stats. Identities = 64/316 (20%), Positives = 132/316 (41%), Gaps = 20/316 (6%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 + +DLNLL L ++ ER+VT+AA+R+ +T AVS +L +LR F+D L V ++P Sbjct: 9 LRAVDLNLLTVLDAVLTERNVTRAAERLGMTQPAVSSALNRLRLLFNDDLIVRRGKEMAP 68 Query: 65 TPLMVSMEQNLAEWMQMSNLLLDKPHHQT-PRGLKFELAAESPLMMIMLNALSKQIYQRY 123 TP +++ + + + + L F L ++L + + Q Sbjct: 69 TPRALALAGPIRKALDLIQASLAHTGAFDCTASRTFRLGITDIGEALLLPRFLQWLEQLG 128 Query: 124 PQATIKLRNWDYDSLD-AITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCV 182 + + SL + G++++ + ++ + Sbjct: 129 ARVRLDFCREPGTSLQNEMRLGKIELVL----------DHIAIPGEEFRRTRVLDLEFVT 178 Query: 183 WLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 +R+DHP + + LD ++ H+ I + T + + +GR R + + +P + Sbjct: 179 LVRQDHPTVGPSLTLDEYMALEHVIIEPREGQTNLAEQIQAAVGRARCVRVQVPRYLSMP 238 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 F+ +Q + + P + + Q + +V+ PLP +P ++WH +P Sbjct: 239 FIVSQSNLVCTLPLP-LARLFEQHFPVRVVSCPLPI-------QPIPLFMMWHACQDGDP 290 Query: 303 KIVWLRETIKNLYASM 318 WLR ++ L + + Sbjct: 291 AHEWLRRSLIELCSRV 306 >UniRef50_Q2KYC5 LysR-family transcriptional regulator n=9 Tax=Burkholderiales RepID=Q2KYC5_BORA1 Length = 306 Score = 235 bits (601), Expect = 1e-60, Method: Composition-based stats. Identities = 72/319 (22%), Positives = 123/319 (38%), Gaps = 22/319 (6%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 ++ LDLNLL+ Q L++ER+++ A+R++++ AVS +L +LR F D LFV + G+ Sbjct: 8 DALRKLDLNLLVVFQHLLEERNISAVARRLDLSQPAVSNALRRLRLAFGDELFVRTAQGM 67 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQIY 120 PTPL M ++E + + + L D P + +A + + L + Sbjct: 68 LPTPLAEGMGGQVSEALSLLSHLADAAQPFDPATSQRRLRIAMSDAGEIHFMPTLMELCA 127 Query: 121 QRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 + P I D + G VD+ L I +LF Sbjct: 128 RHVPGVRIDSLRCT-DLQRELDTGRVDLALGA----------FDGLGSGIVQRMLFRQGY 176 Query: 181 CVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQ 240 R HP + + F H+ + + ++ L+ G S+P F Sbjct: 177 ATLFRAGHPRAYAGMSARAFRAEQHLVVS-RAAPDGQINQALERAGVVLQEQFSVPHFAA 235 Query: 241 SLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 ++ + D LL + L ++ LP+ Q L WH+R Sbjct: 236 VPYIVSTTD-LLATVPEKLAASAAPRFGLQVLTLPIKVPLLQT-------NLYWHRRFQR 287 Query: 301 NPKIVWLRETIKNLYASMA 319 + WLR I + +A A Sbjct: 288 DGANQWLRGLIIDTFADRA 306 >UniRef50_B8ERS8 Transcriptional regulator, LysR family n=1 Tax=Methylocella silvestris BL2 RepID=B8ERS8_METSB Length = 323 Score = 235 bits (600), Expect = 1e-60, Method: Composition-based stats. Identities = 74/333 (22%), Positives = 139/333 (41%), Gaps = 39/333 (11%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 I T+DLNLL + +M+ RSV +A++ + VT SAVS +L++LR D LF++ G+ P Sbjct: 4 IRTIDLNLLRVFEAVMRHRSVIRASRELGVTASAVSHALSRLRQALGDELFISGEAGMEP 63 Query: 65 TPLMVSMEQNLAEWMQMSNLLLD-KPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRY 123 T + +E + + ++ + + +P T F +AA + + +L L ++ + Sbjct: 64 TARALELEPAIRDGLERIDHAVGAQPFVPTDAFRTFRIAATDYVAVAILPQLVGRLAEVA 123 Query: 124 PQATIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCV 182 PQ +++ ++ D + + G +D LP + + + + Sbjct: 124 PQIDLRIFPFNRTDVVRHLDEGRIDFVMG----------WFGDLPDRMRRATIVVEKEAM 173 Query: 183 WLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRER------------- 229 +R HP + +PHI + ++ A+D + G R Sbjct: 174 VVRTGHPLTEGPLTKERLFSFPHIVVELIGTEEAAVDGFFDDRGVWRRVWIERLLIEADA 233 Query: 230 ------TIAMSLPEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQ 283 +A+S+P + M D ++AT P + Q LV L LP++ Sbjct: 234 DQGEVGRVAVSVPHYAAVPPMVRVSD--MVATLPSALARAA-VEQGSLVMLDLPYE---- 286 Query: 284 KKLEVPFTLLWHKRNSHNPKIVWLRETIKNLYA 316 L VP ++WH+R + WL + + Sbjct: 287 -PLAVPVEMVWHQRTERDEGSQWLLGELISAVK 318 >UniRef50_C6DDI5 Transcriptional regulator, LysR family n=4 Tax=Enterobacteriaceae RepID=C6DDI5_PECCP Length = 310 Score = 235 bits (600), Expect = 2e-60, Method: Composition-based stats. Identities = 76/320 (23%), Positives = 125/320 (39%), Gaps = 21/320 (6%) Query: 1 MKKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPL 60 M+ +DLNLL+ +L +ERSV+ AA ++++ AVS +LA+LR FDDPLF+ + Sbjct: 1 MENDFRGVDLNLLVTFLVLYRERSVSVAADKLHLGQPAVSGALARLRTLFDDPLFIRTGQ 60 Query: 61 GLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQ 118 + PT + L+ + +L +P P L + + ++ L K+ Sbjct: 61 VMRPTARADYLATQLSPAFEQLQSVLGEPESFDPLTDSRAITLGMTDWVEIWLMPLLLKR 120 Query: 119 IYQRYPQATIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFS 177 + P I L D ++ + VD+ S + L S Sbjct: 121 LKANAPHLRINLVATDPFLDVERLENDSVDLVISVASPQAGWLK----------QRALLS 170 Query: 178 DVPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPE 237 AL L+ + + H+ + + + +D++L++ G RTI + P Sbjct: 171 SGFRALWHPQQLALPSPVPLEVYSQQRHLLVTYRERAHGIVDDMLEKQGMTRTIYYTTPH 230 Query: 238 FEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKR 297 F + + +AT P H L P+P D + LWH R Sbjct: 231 FSALPGILQHTPS--VATVPEKLATLWCQH-YGLNDSPVPLDLPT-----YTLSALWHAR 282 Query: 298 NSHNPKIVWLRETIKNLYAS 317 NP I WL E I A Sbjct: 283 QDSNPAIAWLYEQIAEAIAE 302 >UniRef50_D0FZR1 LysR-type transcriptional regulator n=2 Tax=Rhodococcus RepID=D0FZR1_9NOCA Length = 311 Score = 235 bits (599), Expect = 2e-60, Method: Composition-based stats. Identities = 81/321 (25%), Positives = 135/321 (42%), Gaps = 23/321 (7%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 K + ++DLNLL+ L L+ RSVT+AA+R+N++ SA+S SL++LR FDDPL V + L Sbjct: 2 KDLRSVDLNLLVDLDALLSMRSVTEAARRLNLSQSAMSGSLSRLRRLFDDPLMVRNGRVL 61 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPR--GLKFELAAESPLMMIMLNALSKQIY 120 TP ++ + E + + + + PR F ++A ++L L + + Sbjct: 62 VLTPRAEALIPPVKEILHQIDGVFAESDDFDPRTTTRSFSISASDYATAVVLAPLLRGLA 121 Query: 121 QRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 P T+ + D + D+ RE++ PL LFSD Sbjct: 122 DDAPNVTVNVLPRSPDVPAVLRLDSADLVI-------EPREMMGDSPLPGVS--LFSDRW 172 Query: 181 CVWL--RKDHPALHQTWNLDTFLRYPHISICWEQSDT-WALDNVLQELGRERTIAMSLPE 237 L PA+ D +L+ PH+ Q D L LG R I +++ Sbjct: 173 VCMLDGSMHEPAVLARLERDHYLQLPHLVYSIGQDRQLNYADRHLASLGVRRRIELTVES 232 Query: 238 FEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKR 297 F + + L++ L L LV P+P + + W+ R Sbjct: 233 FLMAPLLIRGTS--LVSLVLERAASMLPLDGLRLVDPPIPVP-------GITDAMYWNPR 283 Query: 298 NSHNPKIVWLRETIKNLYASM 318 +S +P WLR+ + + A + Sbjct: 284 HSEDPGHRWLRQRLADTAARL 304 >UniRef50_C0ZNV8 Putative LysR family transcriptional regulator n=1 Tax=Rhodococcus erythropolis PR4 RepID=C0ZNV8_RHOE4 Length = 298 Score = 234 bits (598), Expect = 2e-60, Method: Composition-based stats. Identities = 74/311 (23%), Positives = 123/311 (39%), Gaps = 23/311 (7%) Query: 7 TLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTP 66 +DLNLL L+ E SVT AA+R+N++ A S++L +LR DDP+FV + GL PTP Sbjct: 4 DMDLNLLRVFDALVAEGSVTGAAERLNLSIPATSRALGRLRRAMDDPIFVRAGRGLVPTP 63 Query: 67 LMVSMEQNLAEWMQMSNLLLDKPHHQTPR--GLKFELAAESPLMMIMLNALSKQIYQRYP 124 + + ++ + LL + P F + + AL ++ P Sbjct: 64 FALRAAPQVRSLLEGAQGLLIDRKNFEPAELERTFVIRINEGTAASLTPALVRRFAAEAP 123 Query: 125 QATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 A I+ + +D++ G +D+ + E+L+ + + Sbjct: 124 NAVIRCVGEGNEDVDSLRNGSIDLDIGADPLPSSD----------VCSEILYREGHVGLV 173 Query: 185 RKDHPALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 K P L +PH+S +D+ L +G R + + + Sbjct: 174 SKSSPLARTAQPTLAQLCEHPHVSTSRRGRTHGPIDDALSAVGMRRRVIAVVASPVAAAL 233 Query: 244 MAAQPDNLLLATAP-RYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 MAA D L+A P R +Y+ + A+P V WH R H+P Sbjct: 234 MAADSD--LVALVPERLARYFAARLDVAWFAVPTELPA-------VTIHQQWHGRLDHDP 284 Query: 303 KIVWLRETIKN 313 WLRE ++ Sbjct: 285 AHKWLREQVRE 295 >UniRef50_A6X639 Transcriptional regulator, LysR family n=1 Tax=Ochrobactrum anthropi ATCC 49188 RepID=A6X639_OCHA4 Length = 324 Score = 234 bits (598), Expect = 2e-60, Method: Composition-based stats. Identities = 83/336 (24%), Positives = 136/336 (40%), Gaps = 43/336 (12%) Query: 4 SITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLS 63 SI +DLNL+ LM+ER+VTKA +R+N+T SAVS +L KLR D LFV P G+ Sbjct: 3 SIHNIDLNLIRVFNALMEERNVTKAGERLNLTQSAVSHALGKLRYILSDELFVRGPQGMH 62 Query: 64 PTPLMVSMEQNLAEWMQMSNLLLDK-PHHQTPRGLKFELAAESPLMMIMLNALSKQIYQR 122 PTP + Q L + + L + F +A + + A+ +++ + Sbjct: 63 PTPRAEELSQPLRSALADISAALSPVQFDPATADMSFVVATSDFYIGTLFPAVMERLEKE 122 Query: 123 YPQATIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPC 181 P + LR + D + ++ + RG + + +P E L S Sbjct: 123 APGIRLWLRLFNDLNLVEELDRGTLHLVVGA----------FGRIPSRFRRETLVSVDNV 172 Query: 182 VWLRKDHPALHQTWNLDTFLRYPHISICWEQS---------------------DTWALDN 220 +RKDHPA ++T YPHI + + L+ Sbjct: 173 WIMRKDHPASSGPLTIETLGHYPHIDVLLSGRAAMEAAGMQEQEGLERAFVTSNPPFLEG 232 Query: 221 VLQELGRERTIAMSLPEFEQSLFMAAQPDNLLLATAPR-YCQYYNQLHQLPLVALPLPFD 279 +L+E+G R I ++ + A + ++A PR + Y + L L P P Sbjct: 233 LLREVGLSRRIGATVSLILAVPPLVAATN--MIALLPRSVAETYKDTYGLVLHEAPYPLP 290 Query: 280 ESQQKKLEVPFTLLWHKRNSHNPKIVWLRETIKNLY 315 +Q +L H +P + WLR ++ Sbjct: 291 ATQ-------INMLSHNTFGAHPAVAWLRSVLREAI 319 >UniRef50_D1P3H6 Transcriptional regulator, LysR family n=1 Tax=Providencia rustigianii DSM 4541 RepID=D1P3H6_9ENTR Length = 303 Score = 234 bits (598), Expect = 2e-60, Method: Composition-based stats. Identities = 77/317 (24%), Positives = 132/317 (41%), Gaps = 27/317 (8%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 IT +DL L + L++ER+VT+AA ++ +T AVS L+KLR F D LF+ S GL Sbjct: 2 NGITRIDLKQLRVFKALLKERNVTRAAAQMGLTQQAVSAQLSKLRDTFQDHLFLRSAQGL 61 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQIY 120 PTPL +E + + L P P F ++A + ++L L ++ Sbjct: 62 IPTPLAEQLEPRVNTVFESI-AALSPPDRFDPAEVYTTFVISATDYAVAVILPRLMAKVR 120 Query: 121 QRYPQATIKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 + P + +R+++ D L +T G++D+ + + +P + LFS+ Sbjct: 121 TQAPGLKLIIRDFESDRLYPLLTSGDLDLALT----------FPAFVPDGCQTKWLFSEH 170 Query: 180 PCVWLRKDHPALHQTWNLDTFLRYPHISICW-EQSDTWALDNVLQELGRERTIAMSLPEF 238 R D P +Q + + P I + + + D+ G R I MS+P F Sbjct: 171 HICVTRSDSPMQNQQFTISDIADLPQIIVSPTRANLIGSADDWFASKGYSRNIVMSVPSF 230 Query: 239 EQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRN 298 + A D +A P + + L P FD WH R+ Sbjct: 231 AAAPACIASTD--CIAFLPSRILPNPLVRPIQLDDSPPSFD----------VIAAWHLRS 278 Query: 299 SHNPKIVWLRETIKNLY 315 + +P W+ ++ + Sbjct: 279 NQDPLHKWILSLLQQEF 295 >UniRef50_A3VWI6 Transcriptional regulatory protein n=1 Tax=Roseovarius sp. 217 RepID=A3VWI6_9RHOB Length = 314 Score = 234 bits (598), Expect = 3e-60, Method: Composition-based stats. Identities = 68/312 (21%), Positives = 132/312 (42%), Gaps = 23/312 (7%) Query: 9 DLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLM 68 DLNLL ++M ER++T+AA R+N+T +VS ++ +LR D LF+ G+ PT Sbjct: 8 DLNLLRIFHVVMLERNMTRAAARLNMTQPSVSNAIQRLREVLADDLFIKVSGGVVPTAKA 67 Query: 69 VSMEQNLAEWMQMSNLLLDKP-HHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQAT 127 ++ + +Q +D + F +A + ++ ++ ++ P + Sbjct: 68 EAIWPTIRNSIQSLIQTIDPERFEPSVATDSFRIAMSDFVATQLILPVAGPLFNAAPHVS 127 Query: 128 IKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRK 186 + L D++ + G+ D+ ++ I +L + +RK Sbjct: 128 LVLCQNSVDNIVPGLIDGQFDMAAG----------VIPYKEARIRSILLKTLTYVCAMRK 177 Query: 187 DHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAA 246 DHP + F+ H+ + + +D L + G R IA+++ + + + + Sbjct: 178 DHPLAKEPLTFADFMAARHLQVSLSGR-SGFIDRYLTDRGMFRDIALTIRHYTLAPEILS 236 Query: 247 QPDNLLLATAPR-YCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIV 305 D L+A P + +Q L A P+P E +LLWH+RN P Sbjct: 237 STD--LIAILPSEVISHSHQYDLLKTTAPPIPV-------YEDSISLLWHERNDAMPAHR 287 Query: 306 WLRETIKNLYAS 317 W+RE + ++ + Sbjct: 288 WMRERLIDIVKA 299 >UniRef50_D2C014 Transcriptional regulator, LysR family n=1 Tax=Dickeya dadantii Ech586 RepID=D2C014_DICD5 Length = 303 Score = 233 bits (595), Expect = 5e-60, Method: Composition-based stats. Identities = 73/294 (24%), Positives = 123/294 (41%), Gaps = 25/294 (8%) Query: 23 RSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNS--PLGLSPTPLMVSMEQNLAEWMQ 80 +++T AA R+ ++ A+S L++LRA F D LF+ S G+ PTP S+ +A + Sbjct: 22 QNITHAAARLGISQPAMSARLSRLRATFGDQLFIPSPHGRGVLPTPRAESLRPQIASVLH 81 Query: 81 MSNLLLDKPHHQTP-RGLKFELAAESPLMMIMLNALSKQIYQRYPQATIKLRNWDYDSL- 138 + +L+ H F +A +++ L Q + P ++ + L Sbjct: 82 DISAMLEPIHFDAASSSRTFVIALHENPALMLGADLVNQFSEAAPGIRLRFALPESARLP 141 Query: 139 DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPALHQTWNLD 198 + + G++DI + A LF D RK HP +L Sbjct: 142 EQLETGDIDIYIGVN----------AGAHDAWIRRKLFDDEFATAQRKGHPRGSAPLDLK 191 Query: 199 TFLRYPHISICWEQS-DTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQPDNLLLATAP 257 ++ PH+ + E T +D L LG +R++ MS + + + A D LL Sbjct: 192 SYCALPHLVVSSEGDPFTGFVDQTLAGLGYQRSVVMSTQSYAMAPPIVAGTD-LLCTLPR 250 Query: 258 RYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWLRETI 311 R Q + Q L + PLP + ++ WH +NSH+P VWLR + Sbjct: 251 RMLQRFTQ--TLDIFDPPLPL-------QPIVISMYWHPKNSHDPANVWLRAQL 295 >UniRef50_A1UXD8 Transcriptional regulator, LysR family n=41 Tax=cellular organisms RepID=A1UXD8_BURMS Length = 355 Score = 233 bits (595), Expect = 6e-60, Method: Composition-based stats. Identities = 67/299 (22%), Positives = 127/299 (42%), Gaps = 20/299 (6%) Query: 15 CLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSMEQN 74 LMQE+++++AA R++++ AVS +L +LR +PLF + G++PT ++ + Sbjct: 59 VFDALMQEQNLSRAAIRLHMSQPAVSNALTRLRQQLGEPLFTRTARGMTPTAQARTLYEP 118 Query: 75 LAEWMQMSNLLLDKPHHQTPRGLK-FELAAESPLMMIMLNALSKQIYQRYPQATIKLRNW 133 + + + + + L P F+L+ ++L L I R P + +++ Sbjct: 119 VRQALYLLQIGLGPQADFEPDTHHLFKLSMNDYGQTVLLPDLLAHIKSRAPNVMLSVQSD 178 Query: 134 DYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPALH 192 D S+ +T G +D+ + L + YE L + V R HPA Sbjct: 179 DAGSIPAQLTTGTLDLAI----------DYLHFDNPELCYEPLHEEHLVVIGRAGHPAFA 228 Query: 193 QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQPDNLL 252 L + H+SI L+ VL R + + +P + + A+ D LL Sbjct: 229 GGLALRGYEESGHVSIQPRDRRGSPLEIVLGSARVRRVVHLQVPHYLTIPALVAKSD-LL 287 Query: 253 LATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWLRETI 311 R + + ++ L + LP+ + +L+WH++ P + WLRE + Sbjct: 288 GTIPRRLAERFADVYALQIAPLPI-------DIAPIQVSLIWHRQQDAQPGLRWLREQV 339 >UniRef50_Q1M9F6 Putative LysR-family transcriptional regulator n=1 Tax=Rhizobium leguminosarum bv. viciae 3841 RepID=Q1M9F6_RHIL3 Length = 317 Score = 233 bits (595), Expect = 6e-60, Method: Composition-based stats. Identities = 73/316 (23%), Positives = 134/316 (42%), Gaps = 21/316 (6%) Query: 2 KKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLG 61 + S+ +DLNLL +LM+ERSVT+AA R+ T SA+S SL +LR F D LF Sbjct: 3 EFSLNQIDLNLLRTFDVLMRERSVTRAADRLGRTQSAISHSLGRLRDVFKDDLFTREAGI 62 Query: 62 LSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQI 119 + PT + + +++ + + +D+ + P F + + L L + Sbjct: 63 MEPTARAKELAEVISQALHEIRVAVDRHLNFDPTTTSRNFRIGLSDYTAVTYLPELIENF 122 Query: 120 YQRYPQATIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSD 178 P A++ + + + D+L ++ EV+ G + L D Sbjct: 123 SMLAPNASLNVVHAREPDALGSLKNREVECAVLGNPKLDAEH---------FEVVELSRD 173 Query: 179 VPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEF 238 +PA+ +LD +L PH+ I + D LQ+LG R + ++P + Sbjct: 174 RMVCAGWTGNPAMAD-MSLDRYLASPHLQISADGIAAGVADITLQKLGLHRKVVATIPHY 232 Query: 239 EQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRN 298 + ++ + L+ A ++ + +V PL +V +L++ + N Sbjct: 233 LVAPWVIKGTE-LISAFGDGVLLALSEESETAIVPPPLELP-------DVTISLIFDRSN 284 Query: 299 SHNPKIVWLRETIKNL 314 +P VW R IK++ Sbjct: 285 ELDPGHVWFRNLIKDV 300 >UniRef50_B1K4K0 Transcriptional regulator, LysR family n=3 Tax=Burkholderia cenocepacia RepID=B1K4K0_BURCC Length = 301 Score = 232 bits (592), Expect = 1e-59, Method: Composition-based stats. Identities = 76/320 (23%), Positives = 137/320 (42%), Gaps = 24/320 (7%) Query: 1 MKKSI-TTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSP 59 MK+ + DLNLL +L+ ERSV KAAKR++++ SA+S++L+++R F DP+ + + Sbjct: 1 MKRQTWMSADLNLLKAFSVLVAERSVVKAAKRLHLSESAMSRTLSRVRDAFGDPILIRAG 60 Query: 60 LGLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGL--KFELAAESPLMMIMLNALSK 117 L PTP +S+ + + + M+ +L + P L F + L Sbjct: 61 RSLIPTPRALSLHPRVLDMLAMAQDILTRAELVDPASLTQTFTIRCNEGFATEFGAKLLD 120 Query: 118 QIYQRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFS 177 + P ++ D A+ + DI +L I + L Sbjct: 121 IVTTAAPGVHLRFAMQDEKDATALREDKADIEVG----------VLGKSGPEIRVQTLLR 170 Query: 178 DVPCVWLRKDHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLP 236 D + HP H ++D + RYPH+S+ +D +L LG +R +A ++ Sbjct: 171 DRFVGVVAMSHPLAGHDPVSIDAYTRYPHVSVSRRGRRDGPIDALLSALGAKRRVATTVS 230 Query: 237 EFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHK 296 F +L +A ++A P + Q + + LP+ + V +++WH Sbjct: 231 SFPVALALAQGGS--IVANVP-FRQTASGRIGMHTFELPV-------QTEPVVVSMMWHP 280 Query: 297 RNSHNPKIVWLRETIKNLYA 316 + +P WLR+ + A Sbjct: 281 KVDPDPAHRWLRDCLLQTCA 300 >UniRef50_B4RWU1 Transcriptional regulator n=2 Tax=Alteromonas macleodii RepID=B4RWU1_ALTMD Length = 347 Score = 232 bits (592), Expect = 1e-59, Method: Composition-based stats. Identities = 65/306 (21%), Positives = 129/306 (42%), Gaps = 20/306 (6%) Query: 14 LCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSMEQ 73 + +M E ++T+AA R+++T AVS +L+++R ++D LFV G+ PT ++ Sbjct: 1 MIFDAIMTEGAITRAADRLSMTQPAVSNALSRMRTAWNDELFVKDGRGIQPTSFAKNLWS 60 Query: 74 NLAEWMQMSNLLLDK-PHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQATIK-LR 131 + + + ++ + F +AA ++ ++ L K I P I + Sbjct: 61 QIQGPLGELEVAVNPTDFNPASAKRTFRIAATDNIVSMVWGPLRKVIENEAPGINIHAIP 120 Query: 132 NWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPAL 191 N+D ++ + E ++ FS + I E + V +R DHP Sbjct: 121 NYDMETDKILKDAEAELTFSKYQEPGS----------VIRAEHVLDPSWVVVMRPDHPLA 170 Query: 192 HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQPDNL 251 +L+ F+ H+ + + D VL LG R +AMS+ +F + + + + Sbjct: 171 KSQLSLEDFVAADHLLVSVTGDVSGPTDQVLANLGLRRRVAMSVNQFHNATPLLKESN-- 228 Query: 252 LLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWLRETI 311 L+ AP + + + L E+ + + P +++WHKR + + WLR + Sbjct: 229 LICVAPSLVM------EKEIFSGELAVFETPIEIVSSPLSVMWHKRQDQDAGLQWLRGLV 282 Query: 312 KNLYAS 317 Sbjct: 283 VKFIRE 288 >UniRef50_Q2SHJ0 Transcriptional regulator n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SHJ0_HAHCH Length = 291 Score = 232 bits (592), Expect = 1e-59, Method: Composition-based stats. Identities = 69/318 (21%), Positives = 134/318 (42%), Gaps = 30/318 (9%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 ++ +DLNLL+ L L+ ER VT+AAKR++++ A S +L + R F DPL + + Sbjct: 1 MNLRGVDLNLLVILDALLDERHVTRAAKRLHLSQPATSSALERCRHLFGDPLLIRGRGEM 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGL-KFELAAESPLMMIMLNALSKQIYQ 121 + S+ + + + + ++++ + + +L L +++ Sbjct: 61 RLSAKAESLREPIKALLTQAERVINQADTPLAELRQTIRILMADFPVSALLGPLHQRLIT 120 Query: 122 RYPQATIKLRNWD--YDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 P + ++ W +L+ + +GE D+ S + ++ + L + Sbjct: 121 SAPNLDLIVQPWHGAKSALEQLAKGEADLAVS----------VFPNVGASFRCVELLYED 170 Query: 180 PCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFE 239 CV +RKDHPA Q +NL +L YPH+ + +D LQ G R + + +P F+ Sbjct: 171 YCVLMRKDHPAA-QNFNLQQWLAYPHVLVSGRGDADSPVDQTLQARGLRRRVGLVVPYFQ 229 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 + L+A P +C + + P+P + P L WH R Sbjct: 230 MAPD--------LIALLPTHC-VPQDTTKFTVFPPPIPVE-------GFPLHLAWHVRKH 273 Query: 300 HNPKIVWLRETIKNLYAS 317 + + + E I+ + Sbjct: 274 GDQAVSHVVEVIREVTGG 291 >UniRef50_Q1LD16 Transcriptional regulator, LysR family n=8 Tax=Proteobacteria RepID=Q1LD16_RALME Length = 315 Score = 232 bits (591), Expect = 1e-59, Method: Composition-based stats. Identities = 76/322 (23%), Positives = 130/322 (40%), Gaps = 27/322 (8%) Query: 4 SITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVN--SPLG 61 +DLNLL+ L L+ ER+VT A+R+ +T AVS LA+LR FDDPL + + G Sbjct: 11 DFKGVDLNLLVTLDALLDERNVTHTAERLGLTQPAVSAQLARLRRIFDDPLLIPADTGRG 70 Query: 62 LSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTP--RGLKFELAAESPLMMIMLNALSKQI 119 + + +++ + L ++ ++ + P +F +AA + +L +++ Sbjct: 71 MIASARALALLEPLHVALKDLESVVHRRPEFDPFVDTRQFVIAASDNATSTLGMSLLERL 130 Query: 120 YQRY-PQATIKLRN-WDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFS 177 + + + + GEVD+ +P + L Sbjct: 131 SIVAGTGVRVAFVHGRQAEIAAQLESGEVDLLIGSE----------RMVPPTMRARKLLD 180 Query: 178 DVPCVWLRKDHPALHQTWNLDTFLRYPHISIC-WEQSDTWALDNVLQELGRERTIAMSLP 236 + + RK HP + LD + + H+ + S +D LQ LGR R +A+S+ Sbjct: 181 ETFVMAQRKSHPRGARRLTLDMYCKLRHVLVSTSGGSFFGFVDEQLQLLGRSRDVAVSVQ 240 Query: 237 EFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHK 296 F + + D + R Y L A LPFD + WH Sbjct: 241 AFTVVPDLLRRSDY-VCTMPARLAARYADW----LDAFALPFDVPG-----FSLSAAWHP 290 Query: 297 RNSHNPKIVWLRETIKNLYASM 318 RN +P I WLR T+ + + Sbjct: 291 RNHADPAIAWLRSTLAEVAGQL 312 >UniRef50_C7RD08 Transcriptional regulator, LysR family n=1 Tax=Kangiella koreensis DSM 16069 RepID=C7RD08_KANKD Length = 319 Score = 232 bits (591), Expect = 2e-59, Method: Composition-based stats. Identities = 64/316 (20%), Positives = 135/316 (42%), Gaps = 20/316 (6%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 ++I +LD+NLL+ L +L++E+ ++ AA R++++ AVS+SL +LR +DPL + G Sbjct: 6 ENIRSLDMNLLVLLDVLLEEKHISNAADRLHMSQPAVSRSLQRLRDMLNDPLLIRVGNGY 65 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGLK--FELAAESPLMMIMLNALSKQIY 120 T + ++ L W+ + + +P P K + + M + + L + + Sbjct: 66 QLTDKALELQPKLKSWLADF-MCMMQPEKFEPAKAKGEISIMSMDLEMSLFMPNLWQDLQ 124 Query: 121 QRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 + P ++ N D + + +G++D S + S + + L Sbjct: 125 VQAPNVALRSFNIRPDGISLLEQGDIDFLVSEEDKSLESTK--------YHHYHLIQHEF 176 Query: 181 CVWLRKDHPALHQ-TWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFE 239 + + K H Q +D +L+ H + +D L++ G R IA+ +P F Sbjct: 177 VLVMSKQHRLAKQKAIGMDEYLKQRHGLVTVTGKGKPFIDRTLEKQGLSRNIALYVPTFH 236 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 +L + ++ D L+ + + + + + + +PL + L WH+R Sbjct: 237 LALDICSRTD-LMFSMPRLVAEKEGERYGVVMKEMPLKLPL-------LDIYLYWHERQH 288 Query: 300 HNPKIVWLRETIKNLY 315 W R ++ + Sbjct: 289 QTALHKWFRTLMRESF 304 >UniRef50_C5CZA2 Transcriptional regulator, LysR family n=1 Tax=Variovorax paradoxus S110 RepID=C5CZA2_VARPS Length = 317 Score = 232 bits (591), Expect = 2e-59, Method: Composition-based stats. Identities = 72/319 (22%), Positives = 120/319 (37%), Gaps = 23/319 (7%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 +I ++DLNL L Q + RSVT A R+ +T SAVS +L ++R F+D LFV S G+ Sbjct: 1 MNINSIDLNLFLVFQAIYATRSVTLAGDRLGMTQSAVSNALKRMRERFNDALFVRSADGM 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTP--RGLKFELAAESPLMMIMLNALSKQIY 120 PTP+ + + E + +D+ P F +A ++M+ L Sbjct: 61 VPTPVAERLIAPIEEGIACLVQAVDQGRTFEPETSSRIFRIAVNDIGQLVMVPELISVAR 120 Query: 121 QRYPQATIKLRNWD-YDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 P + + ++ + G++D+ E+ + + + LF + Sbjct: 121 GIAPGVRFETVDVSVAEARQRMLHGQIDVALGSWEA----------MGPSFYQQRLFDET 170 Query: 180 PCVWLRKDHPA-LHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGR--ERTIAMSLP 236 V + K P + LD +L HI+ + + L L+ G R + ++ Sbjct: 171 FVVLMSKASPLGTRERIELDDYLAAEHIAYRPQGTTDSQLQQTLERAGALDRRRVVLTAA 230 Query: 237 EFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHK 296 + A LL A A L V P WH+ Sbjct: 231 HSLGLTSIVATSGLLLTAPARLAKAMVASRADLHSVDAPFEV-------RPFEIRQQWHE 283 Query: 297 RNSHNPKIVWLRETIKNLY 315 R + WLRE I L+ Sbjct: 284 RFHQDSGNRWLRELIFGLF 302 >UniRef50_Q2CCM2 Transcriptional regulator, LysR family protein n=1 Tax=Oceanicola granulosus HTCC2516 RepID=Q2CCM2_9RHOB Length = 313 Score = 232 bits (591), Expect = 2e-59, Method: Composition-based stats. Identities = 85/324 (26%), Positives = 133/324 (41%), Gaps = 26/324 (8%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 ++ DLNLL L L++ERS T+AA R+ ++ AVS +L +LRA D LF+ GL Sbjct: 1 MNLAGFDLNLLKVLDALLRERSTTRAAARVGLSQPAVSAALGRLRAALGDELFLRRGQGL 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQIY 120 T ++E L E + LL P P F LA +++ L+ ++ Sbjct: 61 VATDFARALEAPLRETLDRLEDLLAAPQEFDPATAKRTFRLAGIDFFAEMLMPQLAARLA 120 Query: 121 QRYPQATIKLRNWDYDSLDA-ITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 P I+L N +A + R E D+ L+ P ++ +LF Sbjct: 121 AAAPGVRIQLLNLVPREYEATLERYEADVALFP----------LTGSPEWAEHRLLFRSP 170 Query: 180 PCVWLRKDHPAL-----HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMS 234 + +P L T LD F HI + + D+ L +GR+R + MS Sbjct: 171 FVLAAAAGNPRLAHLAEGDTVPLDLFCDLGHILFSLDGNLRAMGDDALAAVGRQRRVVMS 230 Query: 235 LPEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLW 294 + F L A + + L + + L ALP+P + ++W Sbjct: 231 MASFPGILRAVAGSEAVSLVPV-QLARKLQGEMGLRCFALPMPLEPPV-------IGMMW 282 Query: 295 HKRNSHNPKIVWLRETIKNLYASM 318 H+R+S P WLRE I L + Sbjct: 283 HRRSSATPAHAWLREQIVELMTPL 306 >UniRef50_A1U796 Transcriptional regulator, LysR family n=3 Tax=Marinobacter RepID=A1U796_MARAV Length = 303 Score = 232 bits (591), Expect = 2e-59, Method: Composition-based stats. Identities = 74/320 (23%), Positives = 133/320 (41%), Gaps = 24/320 (7%) Query: 1 MKK-SITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSP 59 MK + +LDL L ++ E SV++AA R+ VT SAVS +L +LR F DPLFV S Sbjct: 1 MKPVDMLSLDLRSLATFVAVLDEGSVSRAAVRLGVTQSAVSHTLERLRQAFGDPLFVKSG 60 Query: 60 LGLSPTPLMVSMEQNLAEWMQMSNLL-LDKPHHQTPRGLKFELAAESPLMMIMLNALSKQ 118 G+ PT + ++ + + L P F +AA ++L L + Sbjct: 61 RGIVPTDYALRTGPHIRQLLDDLRTLPSGPPFEPASAEFTFTIAANDYQRDLLLPGLLRI 120 Query: 119 IYQRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSD 178 + Q+ P +++ + D + + D+ S P + +++ L +D Sbjct: 121 LRQQAPGIRLQVIPSGIPNADMLRKEACDLIISPH--APETTDIM--------QRGLMAD 170 Query: 179 VPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEF 238 V+ + + +L +L+ HI++ + + +N L G +R +++ F Sbjct: 171 RMVVFYDPN--QRNAPTDLAEYLKADHIALMFATGERPGFENTLHAKGLDRRNVVTVANF 228 Query: 239 EQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRN 298 D L A Q +PLPFD +LWH+R+ Sbjct: 229 SGLPEFLRGTDMLATAPERMSAQLMRDFA-----WVPLPFD-----YKPFTLLMLWHRRH 278 Query: 299 SHNPKIVWLRETIKNLYASM 318 ++P W+R + ++ A+M Sbjct: 279 QNDPAHRWVRNQVNSVAATM 298 >UniRef50_A4Z170 Putative transcriptional regulatory protein, LysR-family n=1 Tax=Bradyrhizobium sp. ORS278 RepID=A4Z170_BRASO Length = 313 Score = 231 bits (590), Expect = 2e-59, Method: Composition-based stats. Identities = 79/313 (25%), Positives = 131/313 (41%), Gaps = 23/313 (7%) Query: 4 SITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLS 63 S+ +DLNLL+ + L+ ER+VT+AA R+ + + SK+L +LR F DPLF+ +P G+ Sbjct: 8 SLAHVDLNLLVLFEALLSERNVTRAAVRVGLAQPSASKALDRLRHLFGDPLFLRAPGGMR 67 Query: 64 PTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGLK--FELAAESPLMMIMLNALSKQIYQ 121 PTP + + +A ++ L+ P + LA ++L L Q+ Sbjct: 68 PTPRALELAPEIALVLERVRALVAAELPFDPATARGSLRLAMSDAAEFVLLPGLVAQLAG 127 Query: 122 RYPQATIKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 P T++ R D D + + G +D + LP LF + Sbjct: 128 TAPGVTLQARPLDKDRVFAELDEGRLDAVVG----------VFRELPKRFRSAPLFEERF 177 Query: 181 CVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQ 240 R DHP L L+T++ PH+ + A+D+ L+ +G R +A +L F Sbjct: 178 VCLARADHPRLATGLTLETYVELPHLLVTLRDDRKGAVDDALEAIGLHRRVAATLTRFLA 237 Query: 241 SLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 + A D +AT P + L PL ++ L+W Sbjct: 238 LPPVLAFSDA--IATVPSRFAAASAP-NCRLHEPPLALPRWTEQ-------LVWRAGAER 287 Query: 301 NPKIVWLRETIKN 313 P I W + I++ Sbjct: 288 EPMIAWGLQLIRS 300 >UniRef50_A3Y6R5 Transcriptional regulator, LysR family protein n=2 Tax=Gammaproteobacteria RepID=A3Y6R5_9GAMM Length = 312 Score = 231 bits (590), Expect = 2e-59, Method: Composition-based stats. Identities = 69/309 (22%), Positives = 131/309 (42%), Gaps = 21/309 (6%) Query: 9 DLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLM 68 + LL L ++Q R++T +A +NVT SA+SK+L+++R F D + + T Sbjct: 3 NYKLLPALVSILQTRNLTASAAELNVTQSAMSKTLSQIREAFHDKILIREGNQFVLTQKG 62 Query: 69 VSMEQNLAEWMQMSNLLLDKPH-HQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQAT 127 ++ L + MQ + L +F +A+ + ++ +++ ++ P + Sbjct: 63 EQLKTQLPDLMQTLDGLYAPNTMELELCQRRFSIASSDYVAQAVVPMITRVMHDEAPNVS 122 Query: 128 IKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKD 187 ++ + W L + +D+ + +P + D V LR+ Sbjct: 123 LEFQAWQPSKLTELAETSIDLV----------TTIAEEVPENLQGRWCAEDELVVMLRQG 172 Query: 188 HPAL--HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMA 245 HP L Q ++LD + + HI I LD L GR+R + + +P ++ ++ + Sbjct: 173 HPILNKAQAFSLDDYCQSKHILISGGGDKNSPLDQALLAEGRQRQVLIQVPFYQAAIELV 232 Query: 246 AQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIV 305 D LL + Q H + L LP+ +Q + LLWH ++ H+P+ Sbjct: 233 LNTDALLTLPM-HIAGDFAQRHDVTLRRLPISLVPNQ-------YYLLWHTKHHHDPEHK 284 Query: 306 WLRETIKNL 314 W RE L Sbjct: 285 WFRELCTGL 293 >UniRef50_C4I668 Transcriptional regulator, LysR family n=80 Tax=Proteobacteria RepID=C4I668_BURPS Length = 297 Score = 231 bits (590), Expect = 2e-59, Method: Composition-based stats. Identities = 69/302 (22%), Positives = 117/302 (38%), Gaps = 25/302 (8%) Query: 15 CLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSMEQN 74 L L+ E +VT+AA R+N++ +VS LAKLR F DPL + P G+ PT + + Sbjct: 14 TLDALLSEHNVTRAAARLNLSQPSVSIHLAKLRDIFGDPLLLPGPRGMRPTARADELREP 73 Query: 75 LAEWMQMSNLLLDK--PHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQATIKLR- 131 L ++ + P + +AA ++ + P + + Sbjct: 74 LRRALETLGRAVSPGAPFDPAASAHTWRVAASDYSESTVVLPALNGLRAAAPGTRLAVVE 133 Query: 132 NWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPAL 191 +G++D+ F E P + + LF++ + R HP L Sbjct: 134 TVPSRIAKQAEQGDIDLAFHITECA----------PGNLRHRALFTERYVLVGRAGHPRL 183 Query: 192 HQTWNLDTFLRYPHISICWEQSD-TWALDNVLQELGRERTIAMSLPEFEQSLFMAAQPDN 250 + L F + H+ + + D L +LG R + +S+P F + A D Sbjct: 184 KRRPTLAQFCKLDHVIVSPDGGGFQGGTDQALAKLGLARRVVLSVPHFLFMMSAVANSD- 242 Query: 251 LLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWLRET 310 L+A P + L +V P+ +LWH+R+ +P WLRE Sbjct: 243 -LVAMMPS--RLVRDSRALQVVEPPVDVP-------GFRMAMLWHERSHRDPAHQWLREH 292 Query: 311 IK 312 I Sbjct: 293 IA 294 >UniRef50_A0KIB7 Transcriptional regulator, LysR family n=2 Tax=Aeromonas RepID=A0KIB7_AERHH Length = 303 Score = 231 bits (590), Expect = 3e-59, Method: Composition-based stats. Identities = 69/307 (22%), Positives = 136/307 (44%), Gaps = 20/307 (6%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 ++ +DLNLL+ L+ L++ER+ TKAA+R+ ++ AVS++LA+LR +DDPL + +P G+ Sbjct: 1 MNLRGVDLNLLVVLKALLEERNTTKAAERLAMSQPAVSRALARLRLLYDDPLLIRTPQGM 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGLK--FELAAESPLMMIMLNALSKQIY 120 PT ++ L E + P P + + A + + +M+ +L ++ Sbjct: 61 EPTARAEALLLPLREILHDIEQTFSPPEQLDPAQFEGVLRIGAHTYVEYVMMPSLLARLQ 120 Query: 121 QRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 Q+ P I + + D + G + + S ++ +P LF D Sbjct: 121 QQAPNLRIHMVPLNADYESQLDEGVISMVISKQD----------EVPGRFRRIPLFEDKL 170 Query: 181 CVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQ 240 + HP Q +++F + H+ + S+ +D++L G R + + F Sbjct: 171 ICAAHRSHPLQGQVLCIESFAQAQHLLVAPRGSEGGIVDDLLAAHGMTRHTPLIVQSFLA 230 Query: 241 SLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 + F+ L AP ++ + + L L E++ +L+ H+R+ + Sbjct: 231 APFI--------LPCAPLLLTSPARVLRPLMPLLDLVEYETRFALPTFEVSLIRHRRDDN 282 Query: 301 NPKIVWL 307 N + W Sbjct: 283 NAMLNWF 289 >UniRef50_D0RZK6 Transcriptional regulator n=1 Tax=Acinetobacter calcoaceticus RUH2202 RepID=D0RZK6_ACICA Length = 303 Score = 231 bits (589), Expect = 3e-59, Method: Composition-based stats. Identities = 73/318 (22%), Positives = 133/318 (41%), Gaps = 21/318 (6%) Query: 1 MKKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPL 60 M DLNLLL L Q ++V KAA+ + ++PSA S +L +LR DPLFV Sbjct: 4 MHGLPHGFDLNLLLVFNALYQHKNVAKAAETLFISPSAFSHALNRLRDTLQDPLFVRMNG 63 Query: 61 GLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQT--PRGLKFELAAESPLMMIMLNALSKQ 118 + PT + +++ + + L K +F +AA ++ L K Sbjct: 64 EMKPTKKSEEIAPSISNCLSTLSQNLFKNSDFDYATSDYEFVIAATEYTAFSVMPLLVKH 123 Query: 119 IYQRYPQATIKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFS 177 + P IK+ + + S+D + G++D EL P ++ F+ Sbjct: 124 LRTIAPNIKIKIISENKQCSIDELMLGKIDFVIGYS-------ELSEGSPNHLEVFQCFA 176 Query: 178 DVPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPE 237 D V K+ ++Q+ NL++F+ HI + +D L+++G R I + +P Sbjct: 177 DRYVVIAPKN---IYQSMNLESFISAQHIRVSSWNEHYGVIDQSLKKMGIRRQICVEVPH 233 Query: 238 FEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKR 297 + +M Q L++ + + H++ + LP E Q V ++ Sbjct: 234 VMLAPYM-MQSAELIVTLPLKAVDAIKKNHEIDIFELPFSVPEYQVNVYSV-------EK 285 Query: 298 NSHNPKIVWLRETIKNLY 315 + +WL + I +L+ Sbjct: 286 SKLKACQIWLVDEILSLF 303 >UniRef50_A7JRS0 Possible LysR family transcriptional regulator n=3 Tax=Mannheimia haemolytica RepID=A7JRS0_PASHA Length = 302 Score = 231 bits (589), Expect = 3e-59, Method: Composition-based stats. Identities = 68/316 (21%), Positives = 127/316 (40%), Gaps = 24/316 (7%) Query: 4 SITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLS 63 I TLD NLL +L+ E +V++AA+R+++T A+S L +LR F+DPLFV G+ Sbjct: 3 DIRTLDFNLLKAFVVLLDECNVSRAAQRLSITQPAMSGILNRLRESFNDPLFVRVQHGMQ 62 Query: 64 PTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQIYQR 122 PT + + Q +Q + +L P + + +AA + I+ L ++ + Sbjct: 63 PTDRALQLGQTARNILQDISSMLQPPILEPEHLNMTLRIAAMDYVQQIIALPLILRLRRL 122 Query: 123 YPQATIKLRNWDYDSLDAI-TRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPC 181 P + L ++ + + ++D+ R+ L VL+ + Sbjct: 123 APNVKVALLPVQGQNIKTLFEQKKIDLALVSRQH----------LSTDTLKTVLYEERYV 172 Query: 182 VWLRKDHPALHQTWNLDTFLRYPHISICWEQSD-TWALDNVLQELGRERTIAMSLPEFEQ 240 + K HP +LD F P + + + + A D LQ++G +R + +S+ Sbjct: 173 CAMSKTHPMAQTPLSLDQFCNLPFAMLSYNGGEFSGATDLALQKIGLQRKVMVSVNHISL 232 Query: 241 SLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 + D L+A P + + + WH+R Sbjct: 233 LPQLLQGSD--LVAVLPERLAK---------TLPNVYLQPPPIEVEGFTMMMAWHERTEQ 281 Query: 301 NPKIVWLRETIKNLYA 316 + WLRE ++ + Sbjct: 282 DTAHRWLREVLQGVVK 297 >UniRef50_A8FYY5 Transcriptional regulator, LysR family n=2 Tax=Shewanella RepID=A8FYY5_SHESH Length = 331 Score = 231 bits (589), Expect = 3e-59, Method: Composition-based stats. Identities = 79/320 (24%), Positives = 131/320 (40%), Gaps = 22/320 (6%) Query: 1 MKKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPL 60 M + LDLNLL L R+V+ AA+ +N++ SA S +LA+LR DD LF+ S Sbjct: 30 MHNRLHRLDLNLLKLFSALYVHRNVSVAAESMNLSQSAFSHALARLRVQLDDELFIRSRA 89 Query: 61 GLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGLK--FELAAESPLMMIMLNALSKQ 118 + PT S+ + +AE + H P + F A ++M+ L Sbjct: 90 QMIPTRYADSIHEPVAEVLSTLGSCFAPQTHFIPHESRHEFNFAVTDFTALLMMPRLMAH 149 Query: 119 IYQRYPQATIKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFS 177 + + P I L + L A GE+D L++ + + Sbjct: 150 LERHAPLVRINLTSRSEKLPLAAFEAGELDFALGYSHFDEVQTPLIN-------QWIWWE 202 Query: 178 DVPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPE 237 D C + +L TFL HI + +D L + G +R IA+ LP Sbjct: 203 DCYCTIASDK----LERMDLKTFLSRRHILVSPWGEKIGVVDEQLSKQGLQRDIALQLPN 258 Query: 238 FEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKR 297 + F+ A + LL T P++ Q LP+ +P D + + K Sbjct: 259 VMNAPFVVAGSELLL--TLPKFAAQALQ-GALPVKRFDVPVDMPTYQLKLFTY-----KP 310 Query: 298 NSHNPKIVWLRETIKNLYAS 317 + + P+ +W+RE +++L+ S Sbjct: 311 SENTPENLWMREQLQSLFKS 330 >UniRef50_D1SW87 Transcriptional regulator, LysR family n=1 Tax=Acidovorax avenae subsp. avenae ATCC 19860 RepID=D1SW87_9BURK Length = 330 Score = 231 bits (589), Expect = 3e-59, Method: Composition-based stats. Identities = 72/319 (22%), Positives = 128/319 (40%), Gaps = 23/319 (7%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 +I ++DLNL L Q + RSVT A +R+ +T SAVS +L ++R F+D LFV S G+ Sbjct: 1 MNIHSIDLNLFLVFQAIFATRSVTLAGERLGMTQSAVSNALKRMRERFNDVLFVRSAEGM 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTP--RGLKFELAAESPLMMIMLNALSKQIY 120 PTPL + + E + + +D+ G F +A ++M+ L Sbjct: 61 VPTPLAERLIGPVEEGLAAFSQAVDQGRTFEAGTSGRLFRIAVNDIGQLVMMPRLLSLAR 120 Query: 121 QRYPQATIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 P + + ++ + G++D+ E + + + LF + Sbjct: 121 GLAPGIRFETVDVPRAEARQRMLHGQIDVALGSWEP----------MGPSFYQQRLFDET 170 Query: 180 PCVWLRKDHPA-LHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGR--ERTIAMSLP 236 V + + P + LD +L HI+ + L L+ +G R + ++ Sbjct: 171 FVVLVARASPLGTRDSIALDDYLAAEHIAYRPRGTTDHQLQQALERVGALDRRRVVLTAA 230 Query: 237 EFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHK 296 + A L+ TAP+ + L L PF+ + + WH+ Sbjct: 231 HSLGLSSIVATTG--LVLTAPQRLAQAMVASRSDLHILNAPFEVA-----PFEISQQWHE 283 Query: 297 RNSHNPKIVWLRETIKNLY 315 R + WLRE + L+ Sbjct: 284 RFHQDSGNRWLRELMFGLF 302 >UniRef50_P52679 PCP degradation transcriptional activation protein n=1 Tax=Sphingobium chlorophenolicum RepID=PCPR_SPHCR Length = 307 Score = 230 bits (588), Expect = 3e-59, Method: Composition-based stats. Identities = 76/317 (23%), Positives = 132/317 (41%), Gaps = 23/317 (7%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 + + L L L+ L + S KAA +++ +S+ LA+LR FDDPLFV + G+ Sbjct: 1 MNDSVLPLGHLMVFDALYRHGSAGKAAHALSMPQPTLSRWLAQLRTHFDDPLFVRTRSGM 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTP--RGLKFELAAESPLMMIMLNALSKQIY 120 PTPL ++AE + + + P F +AA +ML L + Sbjct: 61 EPTPLAARAAPHIAEMIAIYRQHVRSELRFDPGTSNRNFRIAASDFGQALMLPRLYATLE 120 Query: 121 QRYPQATIKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 + PQ + N + L + + G +DI F G +L I + LF + Sbjct: 121 ETAPQVRVTGVNLRHGPLVEELESGSIDIAFGG----------FPTLSAGIKTQTLFREE 170 Query: 180 PCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTW--ALDNVLQELGRERTIAMSLPE 237 +R+ HPAL +L+ F + HI + + + ++ L EL +I + Sbjct: 171 YVCVMRQSHPALTHGLDLEAFRQCRHIIVTAHEFNHVHEQVEARLLELLPPESIRFTTEN 230 Query: 238 FEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKR 297 F S +A + D ++L R +++ L + +P+ + WH+R Sbjct: 231 FLVSAVIAEETD-VILTIPSRLARWFANRGGLTIFPVPIELP-------SIEVKQYWHER 282 Query: 298 NSHNPKIVWLRETIKNL 314 +P +WLR I + Sbjct: 283 YDKDPGNIWLRRVIAKI 299 >UniRef50_B0C4T0 Transcriptional regulator, LysR family n=1 Tax=Acaryochloris marina MBIC11017 RepID=B0C4T0_ACAM1 Length = 307 Score = 230 bits (588), Expect = 4e-59, Method: Composition-based stats. Identities = 67/309 (21%), Positives = 133/309 (43%), Gaps = 24/309 (7%) Query: 15 CLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSP-LGLSPTPLMVSMEQ 73 +L+QE SVT+AA+++N++ SA+S +L +LRA DP+ + + + TP + + Sbjct: 18 AFDILVQEASVTQAAEKLNMSQSAMSHALKRLRAVLKDPILIRTSQRQMEVTPYALEISP 77 Query: 74 NLAEWMQMSNLLLDKPHHQTPRGLK--FELAAESPLMMIMLNALSKQIYQRYPQATIKLR 131 + + + L P + F +A + + L +Q+ Q+ P I+++ Sbjct: 78 QVRQILAEIQETLLAKDVFNPATAQEDFRIATNDYVEATLSANLLQQLTQQAPGIQIRVK 137 Query: 132 NWDYDS-LDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPA 190 + D+ L A+ +D+ R E L+ + L+ D P Sbjct: 138 GLNKDAVLAALDDNSIDLFIGAGLDLKR----------WHVQESLYQEEFVCVLQSDCPL 187 Query: 191 LHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQPDN 250 +L+ ++ HI + ++ D +L++ + R + S P F F+ A D Sbjct: 188 T--ELSLEQYVERTHILVSFQDDFRGIGDLILEQQQQSRQVVWSTPHFMVVPFLLANSDC 245 Query: 251 LLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWLRET 310 + L R + + L L LP P D ++ +++WH+R+++ P+ WLR+ Sbjct: 246 VAL-LPKRMAERCAKEMGLKL--LPPPIDVTR-----FTVSMIWHQRHNNRPQHQWLRKQ 297 Query: 311 IKNLYASMA 319 +A Sbjct: 298 FLIAAKQLA 306 >UniRef50_Q0SCY7 Transcriptional regulator, LysR family protein n=3 Tax=Actinomycetales RepID=Q0SCY7_RHOSR Length = 331 Score = 230 bits (588), Expect = 4e-59, Method: Composition-based stats. Identities = 75/318 (23%), Positives = 131/318 (41%), Gaps = 22/318 (6%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 + +DLNL+ LL + RSVT+ A+ + +T +VS SL +LR F+D LF+ S GL+P Sbjct: 28 MADVDLNLIRTFVLLYETRSVTRTAELLFITQPSVSHSLRRLRRQFNDDLFIRSSDGLAP 87 Query: 65 TPLMVSMEQNLAEWMQMSNLLLDKPHHQTP--RGLKFELAAESPLMMIMLNALSKQIYQR 122 T L SM L + +++ + + H F + A + +L + + R Sbjct: 88 TVLAASMYPQLHQALEVIDETVSGVGHFDAETSDRTFRICATDLGEISLLPGVLAALETR 147 Query: 123 YPQATIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPC 181 P +++ D+ + + + +G D + + LF + Sbjct: 148 APGCAVQVTPLDFASAAEELRQGRADAVICTPRIDA----------PDLRRDPLFREGYV 197 Query: 182 VWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQS 241 HP + LD FL HI + + D L +GR R IA+ +P F Sbjct: 198 GLCALGHPRIGVEPGLDDFLAERHIVVD-AAAGHVDADQALARMGRRRDIAVRVPHFAVL 256 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 + AQ +L + R + + + + ALP+ + V +R + Sbjct: 257 PELVAQTRHLAVV-PSRVAELFTRSSPVRTFALPVEIPNVEVSLFTV-------RRALPS 308 Query: 302 PKIVWLRETIKNLYASMA 319 P + WLRE I ++ + A Sbjct: 309 PGVDWLRELIADVLQAPA 326 >UniRef50_A3RSL5 Transcriptional regulators, LysR family n=4 Tax=Ralstonia solanacearum RepID=A3RSL5_RALSO Length = 304 Score = 230 bits (588), Expect = 4e-59, Method: Composition-based stats. Identities = 80/315 (25%), Positives = 128/315 (40%), Gaps = 24/315 (7%) Query: 6 TTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPT 65 LDLNLL Q + Q R+VT AAKR N+T A+S +LA+LR F DPLFV SP G+ PT Sbjct: 4 KRLDLNLLGVFQAIYQTRNVTLAAKRHNITQPAMSNALARLREVFADPLFVPSPYGMRPT 63 Query: 66 PLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQIYQRY 123 P + + ++ L P +F + + L AL +++ Sbjct: 64 PYAQQLAVPIDRALREVEQALAMSKGFDPASSDREFRMHLTDFAQVAFLPALLERLRALA 123 Query: 124 PQATIKLRNWDYDS-LDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCV 182 P+ I++ ++ L A+ G +D F + + + LF D V Sbjct: 124 PRVVIRVEALAEETILPALDEGRLDFAFG---------RMSKAAGQGVGRYTLFKDRYAV 174 Query: 183 WLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 +R HP + F IC A+++VL ++G IA+ LP F Sbjct: 175 LMRAGHPLAGHALSRKDFAAAGQALICTSG--HRAIEDVLVKMGA--HIALRLPSFLVVS 230 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 + D +++ A R + ALP+ +L W + S +P Sbjct: 231 RIVETSDLMVIVPA-RLAEQCAATGLFHTAALPVAMPA-------FDVSLFWSESRSADP 282 Query: 303 KIVWLRETIKNLYAS 317 W+R ++ L+ Sbjct: 283 AHAWMRGQLQQLFGQ 297 >UniRef50_Q0JY95 Transcriptional regulator, LysR-family n=4 Tax=Proteobacteria RepID=Q0JY95_RALEH Length = 318 Score = 230 bits (588), Expect = 4e-59, Method: Composition-based stats. Identities = 73/313 (23%), Positives = 123/313 (39%), Gaps = 19/313 (6%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 +I + DLNLL +L QE + ++AA R+ ++ A+S L +LR DPLFV +P GL Sbjct: 1 MNIGSKDLNLLYVFHVLYQEGNASRAAARMALSQPALSHKLNRLRDELGDPLFVRAPRGL 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKP--HHQTPRGLKFELAAESPLMMIMLNALSKQIY 120 +PTP ++ + + + D H R + + ++L AL ++ Sbjct: 61 TPTPRAHALAPQVQRLVGDLDAFYDACAGHDYLARSEHLHIYTTDYMEQLLLPALLPRLR 120 Query: 121 QRYPQATIKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 + P + N + + + +G D+ +G +LP + L S+ Sbjct: 121 SQAPGVVLVTHNTRGELPREELEKGTCDLAIAG---------FYENLPDTFHQQRLCSED 171 Query: 180 PCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFE 239 V + +P + +LD FL H+ +D L G +R + L F Sbjct: 172 FVVLASRANPRIADGLDLDAFLACEHLLTTLTGDLNGVVDRALARQGHKRRVVAGLSSFL 231 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 + + LL R LV LP+PF V +WH R Sbjct: 232 APSRLVRGTELLLTCL--RSVAEEAVARDPDLVLLPVPFALPH-----VDMMQIWHARTD 284 Query: 300 HNPKIVWLRETIK 312 + WLR+ I+ Sbjct: 285 ADRLRRWLRQQIQ 297 >UniRef50_B1MJW3 Putative transcriptional regulator, LysR family n=1 Tax=Mycobacterium abscessus ATCC 19977 RepID=B1MJW3_MYCA9 Length = 295 Score = 230 bits (587), Expect = 4e-59, Method: Composition-based stats. Identities = 74/313 (23%), Positives = 121/313 (38%), Gaps = 22/313 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +DLNLL L L+QE SVT AA+R+ +P AVS+SL +LR D L V + GL PTP Sbjct: 1 MDLNLLRVLDALLQENSVTAAAERLATSPPAVSRSLGRLRRITGDALLVRAGQGLVPTPR 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPR--GLKFELAAESPLMMIMLNALSKQIYQRYPQ 125 V + L ++ ++ +L P F + A + + L +++ P Sbjct: 61 AVQIRDELGGLLRRADQILRPGAEFDPGKLQRTFIVQAAELFLTALAVPLLERLRHDAPG 120 Query: 126 ATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + + A+ RG++DI L L + + Sbjct: 121 VNVVFAPEAREDTGALRRGDIDIELGS----------LDHLDPETRHTPVAMLPMVGVAA 170 Query: 186 KDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMA 245 +DHP + TF Y HIS+ +D L G R + + +P ++ +A Sbjct: 171 QDHPLFEGPIDAGTFATYGHISVSRRGKLYGPIDEALARHGLRRRVPVVVPSHTSAMLLA 230 Query: 246 AQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIV 305 + L A L + +P + V + WH RN+ + Sbjct: 231 RSSRLIALTVAGSV-----DTAGLGIRMFDIPLELP-----AVAVGVAWHPRNNDDAAHT 280 Query: 306 WLRETIKNLYASM 318 WLR + +A + Sbjct: 281 WLRGLLIESFARL 293 >UniRef50_A5VEA0 Transcriptional regulator, LysR family n=1 Tax=Sphingomonas wittichii RW1 RepID=A5VEA0_SPHWW Length = 309 Score = 230 bits (587), Expect = 5e-59, Method: Composition-based stats. Identities = 66/318 (20%), Positives = 130/318 (40%), Gaps = 13/318 (4%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 + LDLNLL+ L L E++VT+AA+RIN++ +S +L KLR F DPL + Sbjct: 1 MHLRGLDLNLLIALDALFTEKNVTRAAERINISQPGMSAALQKLRWHFSDPLLERVGRRM 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGLK--FELAAESPLMMIMLNALSKQIY 120 T ++ + E + L DKP P + F + A + I+ L +I Sbjct: 61 ELTVRGRALADPVREILIKVRDLTDKPEEFDPATARRVFRIGATTFCSDILAAPLLCRIE 120 Query: 121 QRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 + P +++ + D++ + G++D + L S ++D F+D Sbjct: 121 RIAPNISVQFEDLATDTVHRLVDGQLDFAITISARILSDEVNLDSSLSSLDL---FTDAF 177 Query: 181 CVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQ 240 + + + + D P+I + + + ++ ++ I LP F+ Sbjct: 178 VLVTSRQNSRVGDAVTFDQLCELPYIETRFGNVIAGISEQMWRQQPKQPQIRAWLPNFQL 237 Query: 241 SLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 +L + D ++A P + + + + LP+P + ++ L WH+RN Sbjct: 238 TLDTVSHTD--MVAIVPLHLAQLHG-DRYNVRTLPVPVEMPTIEE-----RLFWHQRNDQ 289 Query: 301 NPKIVWLRETIKNLYASM 318 + W + ++ Sbjct: 290 DAGHSWFKGLLQETVQGF 307 >UniRef50_A4JED2 Transcriptional regulator, LysR family n=9 Tax=Proteobacteria RepID=A4JED2_BURVG Length = 308 Score = 230 bits (587), Expect = 5e-59, Method: Composition-based stats. Identities = 71/316 (22%), Positives = 126/316 (39%), Gaps = 20/316 (6%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 LDLNLL+ L L+ E+++++AA++I+++ SA S +LA+LR +FDD L V + P Sbjct: 3 FNKLDLNLLVALDALLSEQNISRAAEKIHLSQSATSNALARLREYFDDELLVQVGRKMEP 62 Query: 65 TPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQIYQR 122 TP +++ + + + + + P F L M ++ L + Y + Sbjct: 63 TPRAEALKDAVRDILVRVDATVTAQPEFVPAQACRLFRLFVSDYTMTTLIPHLFRLAYAQ 122 Query: 123 YPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCV 182 P LR + RGE D+ +E EVL + C Sbjct: 123 APGIGFDLRPQVAYPHRVLERGEADLLIIPKEYC----------STEHPAEVLLEETFCC 172 Query: 183 WLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 L + P + ++ HI + + T +Q LG R + S F Sbjct: 173 VLWEHSPLAKGELTKERYMGAGHIVVQVGEGQTALEAWFMQRLGVVRRVEASTYSFLSPA 232 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 + + + R + + L L +PL +Q ++ WHK + + Sbjct: 233 HLLVGTNR-IATMHRRLAEAAARDLPLVLRDVPLTVPTMEQ-------SVQWHKHRTSDQ 284 Query: 303 KIVWLRETIKNLYASM 318 ++WLR +K A+M Sbjct: 285 GLMWLRALLKEAVAAM 300 >UniRef50_A9F0I7 Transcriptional regulator, LysR family n=20 Tax=Proteobacteria RepID=A9F0I7_SORC5 Length = 319 Score = 230 bits (587), Expect = 5e-59, Method: Composition-based stats. Identities = 72/300 (24%), Positives = 124/300 (41%), Gaps = 25/300 (8%) Query: 22 ERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSMEQNLAEWMQM 81 E SVT AA+R+ ++PSA+S++LA+LR DPL V + GL PTP + + + ++ +Q Sbjct: 18 EGSVTGAARRLRLSPSAMSRALARLRETLGDPLLVRAGRGLVPTPRALELRERVSHLVQG 77 Query: 82 SNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQIYQRYPQATIKLRNWDYDSLD 139 + +L + F L + AL ++ + P ++ Sbjct: 78 AEAVLRPAEELDLKRLVRTFTLRTSEGFVESFGPALIERTGAQAPGVRLRFVAKPDKDSA 137 Query: 140 AITRGEVDI--GFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPALHQTWNL 197 + G VD+ G ++ P R + LF D +R DHP Sbjct: 138 PLRTGAVDLETGVVDEDTSPELRT-----------QALFRDRFIGVVRSDHPLGRAKITP 186 Query: 198 DTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQPDNLLLATAP 257 + H+ +D L LG R + + F ++ +A D L+AT P Sbjct: 187 ARYAAGRHVVFSRRGVAKGRIDESLAALGLAREVVTIVGGFATAIALARATD--LIATVP 244 Query: 258 RYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWLRETIKNLYAS 317 ++ + + L + LPF E+ +LLWH R +P WLR++++ + A Sbjct: 245 ---DHHTRSLRDGLFSFALPFAAP-----EITVSLLWHPRLDADPAHRWLRDSVREVVAG 296 >UniRef50_Q7D3I0 Transcriptional regulator, LysR family n=1 Tax=Agrobacterium tumefaciens str. C58 RepID=Q7D3I0_AGRT5 Length = 316 Score = 230 bits (586), Expect = 6e-59, Method: Composition-based stats. Identities = 57/328 (17%), Positives = 131/328 (39%), Gaps = 33/328 (10%) Query: 2 KKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLG 61 + + ++DLNLL + L+ + ++T A + I ++ A+S +L ++RA D LF + G Sbjct: 3 RFQLGSVDLNLLKVIYALVVKGNMTAAGEYIGLSQPAMSHALKRVRAITGDELFKKTSRG 62 Query: 62 LSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQI 119 T + + ++ + ++ + P F + ++++ L +++ Sbjct: 63 FVMTRFCTEIFPAVRRIIEDTETVMLQRLAFDPATSHRAFRIGMNDYFSVVLMPRLVERV 122 Query: 120 YQRYPQATIKLRNWDYDSL-----------DAITRGEVDIGFSGRESHPRSRELLSSLPL 168 +++ + + + + G +D+ E + P Sbjct: 123 RSEAEHCVLEVIHMPRTGISHNRDFMPVVQEHLNEGTIDVAVMTAE----------NFPA 172 Query: 169 AIDYEVLFSDVPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRE 228 LF++ + ++PA + LD L H+ + S +D L +G E Sbjct: 173 RYRCASLFTERRVCIMSANNPAAKEPLTLDALLSLGHVKVTSSPSRRGWIDERLDAMGLE 232 Query: 229 RTIAMSLPEFEQSLFMAAQPDNLLLATAP-RYCQYYNQLHQLPLVALPLPFDESQQKKLE 287 R + +P F ++ + ++ D L+A P + + + H+L L+ P ++ Sbjct: 233 RRVVAVVPHFSAAVAIVSRSD--LVAMMPESVAKLFERSHELLLLESPFEEEKQST---- 286 Query: 288 VPFTLLWHKRNSHNPKIVWLRETIKNLY 315 +++W +P +WLRE I + Sbjct: 287 ---SMIWLAEKERDPASLWLREQISACF 311 >UniRef50_Q081Z6 Transcriptional regulator, LysR family n=1 Tax=Shewanella frigidimarina NCIMB 400 RepID=Q081Z6_SHEFN Length = 303 Score = 230 bits (586), Expect = 7e-59, Method: Composition-based stats. Identities = 69/309 (22%), Positives = 126/309 (40%), Gaps = 22/309 (7%) Query: 7 TLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTP 66 +DLNL + + E ++TKAA +N++ AVS SL KLR FDD LF+ + PTP Sbjct: 2 KIDLNLFVVFDAIYCEGNITKAASVLNLSQPAVSHSLGKLRTHFDDALFIRQGNEMRPTP 61 Query: 67 LMVSMEQNLAEWMQMSNLLLDKPHHQTPRGLK--FELAAESPLMMIMLNALSKQIYQRYP 124 + ++ ++ E + + L + P + F L+ L L L + + P Sbjct: 62 VAKNVIDDVREALHQLQVCLVQSRQFEPLTSRKSFSLSLHGSLEPYYLPILQQSLSLESP 121 Query: 125 QATIKL--RNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCV 182 + R + + + G++D+ + L + I + L D V Sbjct: 122 SINLSSNKRVRRTELENKLASGDIDLAI----------DTLIPVSNNIMHTQLELDQLVV 171 Query: 183 WLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 RK+HPA++ +L T+L+ H+ + + D L +G R I++ + Sbjct: 172 VARKNHPAMNPDLDLATYLKLDHVLVSSRSTGPSLEDFELSRIGLHRKISLRCQHALSAC 231 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 + D +LL Y+++ + + +P+ ++ L WH P Sbjct: 232 RVILNND-MLLTLPKTAAAMYSKMLDIDIHPMPVELP-------DIGVHLYWHVNVDKEP 283 Query: 303 KIVWLRETI 311 WLR + Sbjct: 284 ANKWLRNKM 292 >UniRef50_Q0SYQ0 Putative transcriptional regulator LYSR-type n=1 Tax=Shigella flexneri 5 str. 8401 RepID=Q0SYQ0_SHIF8 Length = 200 Score = 229 bits (585), Expect = 7e-59, Method: Composition-based stats. Identities = 181/186 (97%), Positives = 184/186 (98%) Query: 32 INVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSMEQNLAEWMQMSNLLLDKPHH 91 +NVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPT LMVSMEQNLAEWMQMSNLLLDKPHH Sbjct: 1 MNVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTQLMVSMEQNLAEWMQMSNLLLDKPHH 60 Query: 92 QTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQATIKLRNWDYDSLDAITRGEVDIGFS 151 QTPRGLKFELAAESPLMMIMLNALSK+IYQRYPQATIKLRNWDYDSLDAITRGEVDIGFS Sbjct: 61 QTPRGLKFELAAESPLMMIMLNALSKRIYQRYPQATIKLRNWDYDSLDAITRGEVDIGFS 120 Query: 152 GRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPALHQTWNLDTFLRYPHISICWE 211 GRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPALH+TWNLDTFLRYPHISICWE Sbjct: 121 GRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPALHETWNLDTFLRYPHISICWE 180 Query: 212 QSDTWA 217 QSDTW Sbjct: 181 QSDTWV 186 >UniRef50_B4E7M9 LysR family regulatory protein n=1 Tax=Burkholderia cenocepacia J2315 RepID=B4E7M9_BURCJ Length = 299 Score = 229 bits (585), Expect = 8e-59, Method: Composition-based stats. Identities = 79/320 (24%), Positives = 132/320 (41%), Gaps = 30/320 (9%) Query: 1 MKKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVN--S 58 MKK D+ LL+ L +L++E +VT+AA+R+ ++ A+S LA+LR DDPL V Sbjct: 1 MKKH----DMGLLVSLDVLLEEANVTRAARRLAISQPALSAQLARLRQVLDDPLLVPAER 56 Query: 59 PLGLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALS 116 G+ TP ++ L E + L++ P+ P F +A M + L Sbjct: 57 GRGMRLTPRAAQLKSPLHELLTRLEDLVEAPYAFDPSTAKRDFTIALNDNAAMTIGLDLI 116 Query: 117 KQIYQR-YPQATIKLRNWDYDSLDAIT-RGEVDIGFSGRESHPRSRELLSSLPLAIDYEV 174 + I ++ Y + + D + + RG +D+ R + +P + Sbjct: 117 ECIRKQSYAGIRLAMLQIPRDEVLDLAARGRIDLVIGTR----------AFMPPGLRTHD 166 Query: 175 LFSDVPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMS 234 L D V RK HP L+ + Y H+ + S +D+ L ELG R +S Sbjct: 167 LVYDRFQVAQRKGHPRGTAAMTLEQYCAYEHVLVSTNGSYHSGIDDFLAELGHYRHTTVS 226 Query: 235 LPEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLW 294 + + + + N L R+ ++ H + LP FD Q + W Sbjct: 227 VQYYTAVPPILERT-NCLATLPERFLHRFD--HMIDRFDLPFAFDPFQLQVG-------W 276 Query: 295 HKRNSHNPKIVWLRETIKNL 314 H R + WLRE + + Sbjct: 277 HPRFDEDLGHQWLREQLIAV 296 >UniRef50_Q0BYJ0 Transcriptional regulator, LysR family n=1 Tax=Hyphomonas neptunium ATCC 15444 RepID=Q0BYJ0_HYPNA Length = 297 Score = 229 bits (585), Expect = 9e-59, Method: Composition-based stats. Identities = 71/319 (22%), Positives = 136/319 (42%), Gaps = 25/319 (7%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 ++ +LDLNLL L+ + ERS+T+A++ +++T AVS +L++LR F+DPLFV G+ Sbjct: 1 MNLRSLDLNLLPVLEAIYAERSLTRASEVLHITQPAVSNALSRLRLHFEDPLFVREGRGV 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTP--RGLKFELAAESPLMMIMLNALSKQIY 120 PT + ++ + E + L+ P F +++ I+ +++++ Sbjct: 61 KPTAMTEALMPAIRESLDKLRNGLEPRSVFEPSRSTRVFNISSRDASAHILAPPIARRLE 120 Query: 121 QRYPQATIK-LRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 + P I + + G +D+ ++ E +L S Sbjct: 121 VQAPGVRISWSQPQRSAIASELASGRLDLAIDVQDLRGADLE----------RVLLSSTK 170 Query: 180 PCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFE 239 L DHP ++ LD F HI++ + ++ + + LG T LP ++ Sbjct: 171 YVCALASDHPLANEPLTLDKFFSMRHIAVSSRREGRSLIEEMARSLGHRITPVHRLPHYQ 230 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 +L + L A P L + LPFD + L WH+ + Sbjct: 231 PALEVVRCTHLALAAPQP-------VTEGSGLAVMKLPFDFPSPGSM-----LYWHREYA 278 Query: 300 HNPKIVWLRETIKNLYASM 318 +P ++WLR I+++ ++ Sbjct: 279 QDPALMWLRGLIRDVSVTL 297 >UniRef50_Q15XJ4 Transcriptional regulator, LysR family n=1 Tax=Pseudoalteromonas atlantica T6c RepID=Q15XJ4_PSEA6 Length = 299 Score = 229 bits (584), Expect = 1e-58, Method: Composition-based stats. Identities = 54/317 (17%), Positives = 134/317 (42%), Gaps = 23/317 (7%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 LDLNLL+ L L+ ER+VT+A +RI+++ S +S ++++LR +FDD LFV L P Sbjct: 3 FKGLDLNLLVALDALIAERNVTRAGERIHLSQSGMSSAVSRLRQYFDDELFVQVGRELIP 62 Query: 65 TPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQIYQR 122 T L ++ + + + + P + +AA M+++ + ++ Q Sbjct: 63 TSLTETLAKPVRRILVEMENTIISRPKFDPASDERCYRIAASELTTMVLMPTVISRLAQD 122 Query: 123 YPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCV 182 P + L D + +G++D+ ++ ++ ++ + Sbjct: 123 APNIRLNLSTIGE--TDLLDKGDIDLMIIPKQFTQ----------DGHPFDEIYQEGYKC 170 Query: 183 WLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQEL-GRERTIAMSLPEFEQS 241 +++ ++ + + + H+ + + +++ A D+ G R + + Sbjct: 171 ICWQENTSIGEKITFEDYQSAGHVVVSYGKNNAPAFDSWFMSHYGISRRVEIMTSNLLAP 230 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 + R +++L Q+ +LP+ + + + ++ +H+ ++ Sbjct: 231 PSLIIGT--------QRIATVHSRLAQIVSQSLPIRVLQPPIEIPPLTQSMQYHRNREND 282 Query: 302 PKIVWLRETIKNLYASM 318 + WLR+ I ++ ++ Sbjct: 283 VGLSWLRQLIIDVAKTI 299 >UniRef50_A1R1P0 Putative transcriptional regulator, LysR family n=1 Tax=Arthrobacter aurescens TC1 RepID=A1R1P0_ARTAT Length = 314 Score = 229 bits (583), Expect = 2e-58, Method: Composition-based stats. Identities = 70/315 (22%), Positives = 136/315 (43%), Gaps = 23/315 (7%) Query: 2 KKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLG 61 + ++ +DLNLL+ +LMQER VT+AA ++++T AVS +L +LR FDDPLF S G Sbjct: 6 ETNLRKIDLNLLVVFHVLMQERHVTRAAAKLHITQGAVSAALGRLRLLFDDPLFQKSRTG 65 Query: 62 LSPTPLMVSMEQNLAEWMQMSNLLL--DKPHHQTPRGLKFELAAESPLMMIMLNALSKQI 119 + PT +++ + + ++ + L+ D+ T F +A L + + + + Sbjct: 66 MVPTAKALALAPRIGQSLKTVSDLVFQDEQFEPTTSNRTFHIAMSDDLEAVFVPKIVTEA 125 Query: 120 YQRYPQATIKLRNWDYDS-LDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSD 178 + + +A+ +D+ +P A + VLF+ Sbjct: 126 IRSNWNVKFSFHQTNSVLWQEALDDPRMDLVMCATP---------PQVPAAYHHSVLFAS 176 Query: 179 VPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEF 238 L + +L+ + H+ + ++ + +D +L+ G ER S+ F Sbjct: 177 SYTCLYDGQRMKLSEPLSLEDYAGSGHLRVSYD-AQRGFVDEILESQGYERKAVASISHF 235 Query: 239 EQSLFMAAQPDNLLLATAPRY-CQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKR 297 ++ + D L+AT P Y + ++ L + P+P +L+W Sbjct: 236 AGAVAVLRAAD--LIATIPTYTAKAFSDAAGLTMSQPPVPMP-------RFTISLIWEVP 286 Query: 298 NSHNPKIVWLRETIK 312 P+ VWLR+ ++ Sbjct: 287 KETQPEHVWLRKMMQ 301 >UniRef50_A0NZC9 LysR family regulatory protein n=3 Tax=Rhodobacteraceae RepID=A0NZC9_9RHOB Length = 305 Score = 228 bits (582), Expect = 2e-58, Method: Composition-based stats. Identities = 73/314 (23%), Positives = 137/314 (43%), Gaps = 20/314 (6%) Query: 4 SITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLS 63 ++ + DLNLL+ + +MQ S++ AA I ++PSAVS +LA+LR +D LF + G+S Sbjct: 3 NLRSFDLNLLVIFRAIMQRGSISGAANEIGLSPSAVSHALARLRVMLNDELFFRTAEGVS 62 Query: 64 PTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQIYQ 121 PT + ++ + + + H P F + + +L L+K++ Sbjct: 63 PTERARELSVDIERGLSFISTAISLQHQFVPAETNRVFTMQVADYVAGFLLPRLAKRLQS 122 Query: 122 RYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPC 181 P TI + + R ++ + + P + + L +D Sbjct: 123 EAPGITIDILPFSISPESVWDRVDMQVRLTPG----------RLQPEMVRSQRLLADEIV 172 Query: 182 VWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQS 241 V +R+ HP + + + + PH+ + + T +++ L G +R +AM++ + + Sbjct: 173 VLMRRGHPRVDEPMTAELYAELPHVKLSQSATGTTVIEDALAARGLKRHMAMTVASWFEI 232 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 + A+ D L+A AP+ + L + PLP DE + F L W R Sbjct: 233 PDIVARSD--LIAIAPQRLLSLDPRLG-KLHSAPLPLDE-----VVFSFDLCWDLRKERE 284 Query: 302 PKIVWLRETIKNLY 315 P WLR+ I ++ Sbjct: 285 PGQKWLRQLIVEMF 298 >UniRef50_Q399F7 Transcriptional regulator, LysR family n=1 Tax=Burkholderia sp. 383 RepID=Q399F7_BURS3 Length = 313 Score = 228 bits (582), Expect = 2e-58, Method: Composition-based stats. Identities = 66/317 (20%), Positives = 122/317 (38%), Gaps = 24/317 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +D +LL L L+ E SV++ A+ + + +S +L +LRA DPL V S + PT Sbjct: 6 IDAHLLKILHTLITESSVSRTAELLGQSQPTISVALRRLRAITGDPLLVRSGSRMVPTSH 65 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQIYQRYPQ 125 +++ + L + + +L+ P F + + L + L A+ P Sbjct: 66 AMTLVEPLDQALAGIAAVLNPASTFDPATTHRTFRIGSPDYLDVFFLPAIVDAFKHEAPG 125 Query: 126 ATIKLRNW---DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCV 182 A I+ ++ D A+ G +D+ + P+ L + L D Sbjct: 126 ARIEFQHLMTVDGGYEHALESGSLDLAVGNWSTPPQQLHL----------QPLCRDDLVC 175 Query: 183 WLRKDHPALHQTWNLDTFLRYPHISICWEQ-SDTWALDNVLQELGRERTIAMSLPEFEQS 241 +R DH D + H+ + + +D L G R + ++P F + Sbjct: 176 VMRDDHRIRRGQLTADVYREADHLGVTTHHATGLGTIDRELARGGLSRNVTTTMPYFGMA 235 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 ++ + NLL T ++ L LPL + + + + LWH R + Sbjct: 236 PYVLMRS-NLLFTTTRTLATHFCSL-------LPLRIEPIPCEPQALTYYQLWHDRTHRS 287 Query: 302 PKIVWLRETIKNLYASM 318 VWLR + + + Sbjct: 288 AAAVWLRRLVSGVAKKL 304 >UniRef50_UPI0001B54141 LysR family transcriptional regulator n=1 Tax=Streptomyces sp. C RepID=UPI0001B54141 Length = 298 Score = 228 bits (582), Expect = 2e-58, Method: Composition-based stats. Identities = 81/310 (26%), Positives = 132/310 (42%), Gaps = 20/310 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +DLNLL L L+QE SVT+AA+R+ +P+AVS++LA+LR DPL V + GL PTP Sbjct: 1 MDLNLLRVLDALLQENSVTRAAERLGTSPAAVSRTLARLRRTVGDPLLVRAGQGLVPTPR 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTP--RGLKFELAAESPLMMIMLNALSKQIYQRYPQ 125 V + + + ++ + +L F + A L++ + +L+++I+ PQ Sbjct: 61 AVELREEVGALIRGCDNVLRPGAGFDAVHLQRTFTVQATDLLLVGLAGSLTERIHAEAPQ 120 Query: 126 ATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + + + +G VD+ +L L I L R Sbjct: 121 VDVVFLPEAVEGGPGLRQGLVDVELG----------VLGHLDPEIRTRRLTRMPLVGIAR 170 Query: 186 KDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMA 245 HP + F HI I +D+ L ELG R A+ +P ++ +A Sbjct: 171 TGHPLFDGRIDARRFAAADHIGISRLGKRLGPIDSALAELGLRRRTAVVVPSHTSAMMLA 230 Query: 246 AQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIV 305 D + L+ A + + + L A P+P D + + WH RNS +P Sbjct: 231 RDTDLVALSLADWI---PDTIAAMGLRAFPVPLDLE-----PLDLGMAWHPRNSADPGHR 282 Query: 306 WLRETIKNLY 315 W RE + Sbjct: 283 WFREHLAAAV 292 >UniRef50_UPI0000383CFA COG0583: Transcriptional regulator n=1 Tax=Magnetospirillum magnetotacticum MS-1 RepID=UPI0000383CFA Length = 329 Score = 228 bits (581), Expect = 2e-58, Method: Composition-based stats. Identities = 85/326 (26%), Positives = 139/326 (42%), Gaps = 26/326 (7%) Query: 1 MKK-SITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSP 59 MKK + TLD+ + L +L+ E +V++AA+R+ VS +L +LR DPL V Sbjct: 1 MKKVAPATLDVRAMRTLLVLLTECNVSRAAERLGQAQPTVSLALKRLREMLGDPLLVRYG 60 Query: 60 LGLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTP--RGLKFELAAESPLMMIMLNALSK 117 L PT + ++ +L + + L P F LAA + L + L L + Sbjct: 61 GSLVPTERGLDLKVSLEAILSEIDARLTPHPTFDPAHSDRTFRLAANNCLGSVFLPPLVR 120 Query: 118 QIYQRYPQATIKL--RNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVL 175 I + P T+++ D L + G +D P + + L Sbjct: 121 TIRRAAPGVTVEVGQTPPMEDLLRQMAEGAIDAVIGNWPQPPSHLRIST----------L 170 Query: 176 FSDVPCVWLRKDHPALH--QTWNLDTFLRYPHISICWEQSDT-WALDNVLQELGRERTIA 232 S +R +H +L FL H+S +++ +D L ELG +R IA Sbjct: 171 LSTDIVCVMRPNHRLARREGRIDLADFLAEGHLSPTSDRNAQLSPIDGRLIELGLKRRIA 230 Query: 233 MSLPEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTL 292 +++PE+ +M AQ D LL T + + Q LV P ++ + F + Sbjct: 231 VTVPEYAMVPYMLAQSD-LLFTTGRHFAEQIAQSFAFSLVDAP-------EELGRMSFYM 282 Query: 293 LWHKRNSHNPKIVWLRETIKNLYASM 318 LWH H+P WLR TI+++ A + Sbjct: 283 LWHDCKHHSPAHAWLRRTIRSVAADI 308 >UniRef50_Q5QVJ9 Transcriptional regulator, LysR family n=1 Tax=Idiomarina loihiensis RepID=Q5QVJ9_IDILO Length = 331 Score = 228 bits (581), Expect = 2e-58, Method: Composition-based stats. Identities = 75/315 (23%), Positives = 140/315 (44%), Gaps = 25/315 (7%) Query: 4 SITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLS 63 ++ +LDLNLL+ L L++E+ VT+AA+R+ ++ A S +L + R FDDPL + Sbjct: 29 NLRSLDLNLLVILHALLEEQHVTRAARRLALSQPATSNALDRCRHIFDDPLLERVAGEMR 88 Query: 64 PTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGL-KFELAAESPLMMIMLNALSKQIYQR 122 T S+++ L++ + +++ P + + L +I++ L ++ Sbjct: 89 LTAKAQSLKEPLSQALLAITAIVEIPKVELTQVRQTVRLIMADQPGLIVMTHLLTKLSTS 148 Query: 123 YPQATIKLRNW--DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 P+ + L W D+L + GE DI S +LP + + + Sbjct: 149 APKVNLSLLPWRSSKDALHRLENGEADIAIST----------FPALPPKFYRQQIAYESY 198 Query: 181 CVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQ 240 V +R HPA Q +N D +L +PHI + E + +++ VL + G+ R + +P F Sbjct: 199 VVAMRASHPAA-QKFNADEWLAWPHIVVSGEGNARGSVEEVLAQQGKVRHVGAVVPNFTM 257 Query: 241 SLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 + D ++AT P C + L + P+ L WH R Sbjct: 258 IDPLIKATD--MIATTPMNC--LSDPQGLAIFEPPIAVP-------GFSLHLAWHARRDS 306 Query: 301 NPKIVWLRETIKNLY 315 + + + ET+++L+ Sbjct: 307 DLVVKHVIETLQHLF 321 >UniRef50_Q88LJ0 Transcriptional regulator, LysR family n=1 Tax=Pseudomonas putida KT2440 RepID=Q88LJ0_PSEPK Length = 320 Score = 228 bits (581), Expect = 3e-58, Method: Composition-based stats. Identities = 58/297 (19%), Positives = 133/297 (44%), Gaps = 21/297 (7%) Query: 20 MQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSMEQNLAEWM 79 +E++++ AA+R+ ++ S SL +LR +F+D LF+++ G+ PTP VS+ +++ + Sbjct: 18 YREQNLSAAARRLGMSQPMASASLRRLREYFEDQLFLSTGRGMRPTPFTVSIAASVSGVL 77 Query: 80 QMS--NLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQATIKLRNWDYDS 137 + +L F ++ +I + + +++ + P ++ + + Sbjct: 78 ERIKHEILAKPAFQPRQSDRLFTISTSDIGALIFVPPILRRLGEDAPNTDLRCVSLPHQQ 137 Query: 138 LD-AITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPALHQTWN 196 L+ A+ +G VD+ + + + LF +R++HP++ T + Sbjct: 138 LEQALEQGSVDLAVGYFPDLQGEQ---------VKTQALFEHNFTCIVRRNHPSIGDTLS 188 Query: 197 LDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQPDNLLLATA 256 L+ FL H+ + E + L+EL +R + + +P F + A + ++AT Sbjct: 189 LEQFLAADHLVVNQEGRSQEIFEQRLRELKLQRRVHLEVPHFMSVPQLIASTN--MVATV 246 Query: 257 PRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWLRETIKN 313 P + Q+ ++ P+ ++ + K L WH++ +P + W R + Sbjct: 247 PLSLGVWFASEQIKMLTPPIEVEKFELK-------LHWHRQMEDDPAVSWFRNAVFE 296 >UniRef50_B7QWJ8 Transcriptional regulator, LysR family n=1 Tax=Ruegeria sp. R11 RepID=B7QWJ8_9RHOB Length = 320 Score = 227 bits (580), Expect = 3e-58, Method: Composition-based stats. Identities = 77/325 (23%), Positives = 134/325 (41%), Gaps = 28/325 (8%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 + TLDLNLL L + E S KA +R+ ++ SAVS +L++LR +DPLFV L Sbjct: 1 MNFATLDLNLLRVLDAVFAEGSTVKAGRRLGLSQSAVSGALSRLRHALNDPLFVRQGNQL 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGLK--FELAAESPLMMIMLNALSKQIY 120 T S+ +L + LL P H P F ++A +++ L + Sbjct: 61 VATEFAESLRHDLRAELDRLETLLSPPSHFDPATASGLFRISAADFFCDMLMPRLGDLLS 120 Query: 121 QRYPQATIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 ++ P +L + ++++ R + D+ + LP + E LF Sbjct: 121 RKAPGIRAQLLDLVPRHHVESLERQQADLALLPD----------TDLPDWMMREPLFRSE 170 Query: 180 PCVWLRKDHPAL-----HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMS 234 V R+ +PA + D F PH+ T D L ++GR R + M+ Sbjct: 171 YAVLARRGNPATKDLRHGERMPFDLFCSLPHVLFAPHGDLTAQSDEALAKVGRRRRVVMT 230 Query: 235 LPEFEQSLFMAAQPDNLLLATAP-RYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLL 293 +P F + ++ D L+ P + + ++ L L P+ D Q + Sbjct: 231 VPVFSGVCRVVSESD--LIGLLPLQLARKVQPVYGLDLFVPPIAIDPIQLIG-------V 281 Query: 294 WHKRNSHNPKIVWLRETIKNLYASM 318 WH++ P W+R+ I ++ + Sbjct: 282 WHRKADTAPMAAWMRQQIFDILRPL 306 >UniRef50_B9JQ31 Transcriptional regulator n=1 Tax=Agrobacterium radiobacter K84 RepID=B9JQ31_AGRRK Length = 296 Score = 227 bits (579), Expect = 4e-58, Method: Composition-based stats. Identities = 69/314 (21%), Positives = 127/314 (40%), Gaps = 24/314 (7%) Query: 9 DLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLM 68 DLNL+ + + SV+ AA ++N+T +VS +L++LR DD LF + G+ PT + Sbjct: 3 DLNLIRAFIAIYETESVSGAAVKLNLTQPSVSHALSRLRDMLDDTLFTRTRDGMKPTFVA 62 Query: 69 VSMEQNLAEWMQMSNLLLDKPHHQTPRGLK--FELAAESPLMMIMLNALSKQIYQRYPQA 126 M + + P+ F+LA M L + ++ Q P+ Sbjct: 63 ERMYGIFRSALSEIETAIASRWSFDPKSSNQVFKLAFSDLGEMTFLPHILPRLSQEAPKV 122 Query: 127 TIKLRNWDYDSLDA-ITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 I++ + + LD G++D +S + E +F + + Sbjct: 123 GIEVVELEVEKLDDWFATGKIDAAIFNS----------TSAKVQSRSEPIFQERYVCLVS 172 Query: 186 KDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMA 245 HP + +L+ +L HI + S +++ ++ +G R +++ LP F + Sbjct: 173 ARHPRIRDQVSLEQYLSEGHIVVSSH-SGHRQVEDQIRAIGAARQVSLRLPHFTGLHDIV 231 Query: 246 AQPDNLLLATAP-RYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 A+ + LLAT P R + + +PLP E L W + + Sbjct: 232 AKTE--LLATLPSRTAHMFASSGMVKYCTIPLPIP-------EFEVRLHWRETDGEIEAQ 282 Query: 305 VWLRETIKNLYASM 318 WLRE +K+ + Sbjct: 283 AWLREILKSCLQGL 296 >UniRef50_Q8KY13 LysR-type transcriptional activator n=1 Tax=Rhizobium sp. TAL1145 RepID=Q8KY13_9RHIZ Length = 320 Score = 227 bits (578), Expect = 5e-58, Method: Composition-based stats. Identities = 65/317 (20%), Positives = 133/317 (41%), Gaps = 21/317 (6%) Query: 4 SITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLS 63 ++ +DLNLL LLMQERSVTKAA R T SA+S SL +LR F D LFV ++ Sbjct: 6 TLNQIDLNLLRVFDLLMQERSVTKAADRAGRTQSAISHSLNRLREIFGDELFVKRAGSMN 65 Query: 64 PTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQIYQ 121 PT + + + + ++ + + P +F + + L L ++ Sbjct: 66 PTAQARELATVITQALSDIEGVVSQRINFKPSESHRQFRIGVTDYTSALYLPTLLEEFNS 125 Query: 122 RYPQATIKLRN-WDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 + P A +++ + Y++ + ++ ++D G S + + VL Sbjct: 126 KAPNARLRIVPVYLYEAAELLSDPDLDCVLIGNPIIRESHIVET---------VLARHEM 176 Query: 181 CVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQ 240 + + ++ +L PH+ I + ++ D L +G R +A ++P + Sbjct: 177 LCAAWSGNAVIKD-LTMEKYLAMPHLQISPDGDESGVSDKALATIGLSRRVAATIPYYMV 235 Query: 241 SLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 + + ++ A A ++ ++ + PL +V +L++ + Sbjct: 236 APKVLRGT-QMIAAFADGMLSLIDESSEILVTRPPLALP-------DVRVSLIYVRTKQT 287 Query: 301 NPKIVWLRETIKNLYAS 317 + +WLR I+++ + Sbjct: 288 DAGHIWLRSCIRSIVTA 304 >UniRef50_Q9FD34 PnbR n=2 Tax=Pseudomonas RepID=Q9FD34_PSEPU Length = 348 Score = 226 bits (577), Expect = 7e-58, Method: Composition-based stats. Identities = 74/341 (21%), Positives = 125/341 (36%), Gaps = 43/341 (12%) Query: 4 SITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLS 63 + LDLNL+ +M+ERSV +A++R++++ SAVS +L++LR +FV + G+S Sbjct: 22 AFDKLDLNLIRVFDAVMEERSVLRASQRLHLSQSAVSHALSRLREGLGQEIFVRTGKGMS 81 Query: 64 PTPLMVSMEQNLAEWMQMSNLLLDK---PHHQTPRGLKFELAAESPLMMIMLNALSKQIY 120 PT + + L + + L + P F +AA + +L L+ Q+ Sbjct: 82 PTSYALEISGALHAALLSMSKALSQAATPFSPQSVCRSFVIAANDYVSATLLPQLNHQLS 141 Query: 121 QRYPQATIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 + P +++ D + I G +D+ S P VLF D Sbjct: 142 KVAPGIDLQITPATRLDLAEQIDLGRIDVAIGTFRSVPERFRTKP---------VLFQDE 192 Query: 180 PCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTW---------------------AL 218 HP L +RYP + AL Sbjct: 193 -VFICSGTHPISANKPQLQDLVRYPLAVVSLGGEGEGMLSGYILERGLARQAQMYDRTAL 251 Query: 219 DNVLQELGRERTIAMSLPEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPF 278 + L E G + LP F + + L + P + + + + LP P Sbjct: 252 EQALNEAGLSMRRQIVLPHFLALPMLLEGSELLAIVPQP-LARTFARTLGFKIKPLPYPA 310 Query: 279 DESQQKKLEVPFTLLWHKRNSHNPKIVWLRETIKNLYASMA 319 Q L+WH N ++P +WL E I ++ Sbjct: 311 ARQQ-------LDLIWHSSNDNDPAQLWLHEQISEAANEIS 344 >UniRef50_A8KZI9 Transcriptional regulator, LysR family n=4 Tax=Actinomycetales RepID=A8KZI9_FRASN Length = 310 Score = 226 bits (577), Expect = 7e-58, Method: Composition-based stats. Identities = 77/313 (24%), Positives = 129/313 (41%), Gaps = 20/313 (6%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 +S ++LDLNLL+ L L++ERSV AA+R+ +T SAVS++L +LR DDP+ V + + Sbjct: 5 QSTSSLDLNLLVALDALLEERSVNAAARRLRLTESAVSRALGRLRRAMDDPVLVRAGHRM 64 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQIY 120 PTP ++++ + ++ ++ + F + A L + L ++ Sbjct: 65 VPTPRALAVQAEVHALVERAHAVFTPIREPDLATLARTFTILASDALTTAIGVDLLDRLT 124 Query: 121 QRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 + P ++ + D + G D+ + S I EVL + Sbjct: 125 RDAPGVRVRFLPEPSATDDPLRDGTADLEIGD----------IDSTSPEIHIEVLGEEQA 174 Query: 181 CVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQ 240 +R HP + H++ LD VL G RT+A+S+P Sbjct: 175 LAVVRAGHPLTRGRLTPERLAAARHVTASRRGRFAGPLDEVLAARGLRRTVAVSVPSHSA 234 Query: 241 SLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 +L + A D L+ P L L LVAL L D + WH R Sbjct: 235 ALLLVAGSD--LVGLVPARLGR-GLLDSLGLVALDLGLDLPT-----LTIAQAWHPRYEA 286 Query: 301 NPKIVWLRETIKN 313 + WLR +++ Sbjct: 287 DAPHRWLRGHVRD 299 >UniRef50_Q11CG0 Transcriptional regulator, LysR family n=1 Tax=Chelativorans sp. BNC1 RepID=Q11CG0_MESSB Length = 304 Score = 226 bits (576), Expect = 9e-58, Method: Composition-based stats. Identities = 79/318 (24%), Positives = 129/318 (40%), Gaps = 24/318 (7%) Query: 7 TLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTP 66 +DL L +LM+ER+V++AA ++ + +S+ LAKLRA+FDDPL V S + PTP Sbjct: 5 KIDLFTLRGFSILMEERNVSRAAFKLGLKQPTMSRMLAKLRAYFDDPLLVWSGGHMVPTP 64 Query: 67 LMVSMEQNLAEWMQMSNLLLDKPHHQTP--RGLKFELAAESPLMMIMLNALSKQIYQRYP 124 + +E + + + L P P GL LAA + L + ++ R P Sbjct: 65 RAILLESEIHQVLATMERLSSSPQEFDPKTSGLTIRLAATGYTENVFLARVMSEVAVRAP 124 Query: 125 QATIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVW 183 +++R D A+ +GEVD + + VLF+D Sbjct: 125 GVQLEIRPPDRLHDTSALEKGEVDFLVGWNVTPA----------PVLRSRVLFTDELVCI 174 Query: 184 LRKDHPALHQT-WNLDTFLRYPHISICWEQSDTW--ALDNVLQELGRERTIAMSLPEFEQ 240 R HPAL + + ++ PH+ T L L + G + + Sbjct: 175 ARAGHPALEDGNLSYERYVALPHVQFDTPSKTTTELLLHERLAQRGDRPFVQFRVQNLLT 234 Query: 241 SLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 + A D L+ + R+ Y Q +QL + LP+ Q + WH+R Sbjct: 235 VAEIVANSD-LIATVSKRFVISYLQQYQLSIAELPVRLPVMQNRAW-------WHERMHR 286 Query: 301 NPKIVWLRETIKNLYASM 318 P W R + + +M Sbjct: 287 EPYSHWFRSLLAEIGKTM 304 >UniRef50_A6UK78 Transcriptional regulator, LysR family n=2 Tax=Sinorhizobium RepID=A6UK78_SINMW Length = 310 Score = 226 bits (576), Expect = 1e-57, Method: Composition-based stats. Identities = 76/300 (25%), Positives = 125/300 (41%), Gaps = 20/300 (6%) Query: 21 QERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSMEQNLAEWMQ 80 +ERSVT+AA R+ ++ A S++LA+LR F D + V+ P G T M +L + Sbjct: 28 EERSVTRAATRLGMSQPAASRALARLRVLFSDAILVDGPGGYLLTARAEEMRPSLRNTLA 87 Query: 81 MSNLLLD-KPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQATIKLRNWDYDSLD 139 N LLD + L ++ L + ++ P +++ + L+ Sbjct: 88 GVNELLDGRTFDPMRATGAVRLLMLDLEAAVLAPRLISSLAEQAPAVDLQVVSPGLRPLE 147 Query: 140 AITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPALHQTWNLDT 199 A+ VD ++ P I L+ D +R DHPA Q L Sbjct: 148 ALEADAVDAVIG----------VVDEAPAGIRKRKLYQDGFVTLMRADHPAAGQKLTLQR 197 Query: 200 FLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQPDNLLLATAPRY 259 FL H+ + + +D +L LGR+R + + +P F ++ +AA+ D L+ T P Sbjct: 198 FLELDHVVVSITGTGPAWVDEILARLGRQRRVKVRVPSFFAAVEIAARSD--LVITLPSS 255 Query: 260 CQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWLRETIKNLYASMA 319 + + + PL V +L WH RN P+ VWLR TI + + Sbjct: 256 LARTADMRRFVMTPPPL-------DLGSVVMSLAWHGRNQDAPRHVWLRRTIVTAVSDIG 308 >UniRef50_Q5E7C7 Transcriptional regulator, LysR family n=5 Tax=Vibrionaceae RepID=Q5E7C7_VIBF1 Length = 330 Score = 226 bits (576), Expect = 1e-57, Method: Composition-based stats. Identities = 67/320 (20%), Positives = 125/320 (39%), Gaps = 22/320 (6%) Query: 4 SITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLS 63 + +DLNLL+ LM+ +SV+ AA ++ V SA+S SL++LR DPLF + Sbjct: 25 NWKAVDLNLLVAFSTLMETKSVSLAANKLFVGQSAMSHSLSRLRELLHDPLFERQGHQMI 84 Query: 64 PTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGL--KFELAAESPLMMIMLNALSKQIYQ 121 PT + + + + +Q + + K F++ ++ + I+Q Sbjct: 85 PTAKAIQLYPLVNKVLQTISGDILKVDTFEASEFTGTFKIGMTDYAELLFAADIFDAIHQ 144 Query: 122 RYPQATIKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 P A + D + D +D+ + + Y+ L+++ Sbjct: 145 LAPNAQLCFTTVDKANYQDRFDSEPLDLVIGSMKPELK----------EFQYQTLYTEKH 194 Query: 181 CVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQ 240 LD ++ PH + + + +D L+ LG R+++++ F Sbjct: 195 VCMWDGQRHLFSSPITLDDYISLPHALVSPDGALKTGVDKELKALGVGRSVSVASKHFLT 254 Query: 241 SLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 + + D L+ P + QL L + L E E L+W RN Sbjct: 255 IRHLMKKRD--LICVVPEL------MAQLDLFSEKLVHSEPPINVGEFDIQLIWQTRNKE 306 Query: 301 NPKIVWLRE-TIKNLYASMA 319 N + WL+E I+ + S+A Sbjct: 307 NKRYQWLKELLIQTIEKSVA 326 >UniRef50_A3VAM0 Nodulation protein d1 n=1 Tax=Rhodobacterales bacterium HTCC2654 RepID=A3VAM0_9RHOB Length = 312 Score = 225 bits (575), Expect = 1e-57, Method: Composition-based stats. Identities = 70/322 (21%), Positives = 129/322 (40%), Gaps = 21/322 (6%) Query: 1 MKKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPL 60 M LDLNLL+ L +L++E++V++AA+++ ++ SA S +LA+LR +F+D L V Sbjct: 1 MDMRFKGLDLNLLVALDVLLREKNVSRAAEKLFLSQSATSGALARLREYFNDDLLVQVGR 60 Query: 61 GLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQ 118 + TP ++ + + + + + P + + + + +L ++ Sbjct: 61 QMVLTPRATALSGKVRSALVQIDGTIIQSPEFDPSTAVRILRIISSDFITISVLREAVRE 120 Query: 119 IYQRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSD 178 I + P TI ++ + I RGEVD+ + E F+D Sbjct: 121 IGKSAPGLTIDIQQPANKPHEKIERGEVDLLLMPELY----------ISPDHPSEQFFTD 170 Query: 179 VPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQ-ELGRERTIAMSLPE 237 V + T D F H ++ +E +Q + GRER IA+ + Sbjct: 171 DYVVIAWSGNTQFGDTITEDQFFAARHATVMFESHTPSYEAWFIQNKDGRERDIAIVVGS 230 Query: 238 FEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKR 297 F FM D L L + + L L+ P+ + ++ WH Sbjct: 231 FSALPFMIEGTDYLAL-MHRSMADIFARQMPLRLLRCPIDIPPLVE-------SIQWHTY 282 Query: 298 NSHNPKIVWLRETIKNLYASMA 319 + + + W+RE I +A Sbjct: 283 SDGDECLAWVREKIHEQARGLA 304 >UniRef50_A6F7C1 Transcriptional regulator n=1 Tax=Moritella sp. PE36 RepID=A6F7C1_9GAMM Length = 308 Score = 225 bits (575), Expect = 1e-57, Method: Composition-based stats. Identities = 75/295 (25%), Positives = 121/295 (41%), Gaps = 22/295 (7%) Query: 25 VTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSMEQNLAEWMQMSN- 83 VT AA+R +T SA+SK+LAKLR F DPL + T ++ LA+ + + Sbjct: 24 VTAAAQRQYITQSAMSKNLAKLREIFADPLLIKMDNKSQLTEKAKQLKPELAQILNNIDG 83 Query: 84 LLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQATIKLRNWDYDSLDAITR 143 LL+ +F +A+ + +L A +Y P + L WD +L A+ R Sbjct: 84 LLMTGGFDPLQSQREFTIASTDYVTDYILPAALAHLYLHAPNIKLNLTYWDKFTLAAMER 143 Query: 144 GEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPALHQTWNLDTFLRY 203 GE+D+G ++ + Y L D +R+ HP ++ L + +Y Sbjct: 144 GEIDLG----------ATIIRPEHKHLSYLPLEKDNYVCIMRQGHPLENEVLTLANYTQY 193 Query: 204 PHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQPDNLLLATAPRYCQYY 263 PH I +D L G R +A+ +P + + + A+ D+LL Sbjct: 194 PHSIITSGADKASDIDVALSAQGLFREVALRIPSYSSAFSILAKTDHLL-TIPNSIADKL 252 Query: 264 NQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWLRETIKNLYASM 318 Q LP+ Q ++WH R H+ WLR+ LYA + Sbjct: 253 IIGEQFIRKDLPIKLPILQA-------AIIWHPRFDHDLAHKWLRD---ELYAQL 297 >UniRef50_Q46MT9 Regulatory protein, LysR:LysR, substrate-binding n=1 Tax=Ralstonia eutropha JMP134 RepID=Q46MT9_RALEJ Length = 334 Score = 225 bits (574), Expect = 1e-57, Method: Composition-based stats. Identities = 71/318 (22%), Positives = 123/318 (38%), Gaps = 23/318 (7%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 LDLN L+ L L+ RSV KAA+R+ ++ A S SLA+LR +F+D L V Sbjct: 3 FNKLDLNQLVVLDALLSTRSVGKAAERLFLSQPATSCSLARLREYFEDDLLVAVGKTQVL 62 Query: 65 TPLMVSMEQNLAEWMQMSNLLLDKPHHQTP--RGLKFELAAESPLMMIMLNALSKQIYQR 122 TPL + + + + + + + P +F + + ++ + L+ + ++ + Sbjct: 63 TPLALGLRKPVRDVLLQIQTITRARPSFDPATSTRRFIIESSDYVISVFLSQVIRRAAEA 122 Query: 123 YPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCV 182 P LR + + + GE ++ + + + E LF D Sbjct: 123 APLMQFDLRAISPQTPEHLESGEAELLIAPEFA----------MVPGHPSEPLFEDTFSC 172 Query: 183 WLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRE-RTIAMSLPEFEQS 241 + D ++T+ HI + W D+ L G+ R + P F Sbjct: 173 LVSADSTVGQDGLTVETYFDAAHIGVEWGGGRRVTFDSRLIATGKRTRRQDVIAPSFTLV 232 Query: 242 LFMAAQPDNLLLATAP-RYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 + + D +AT P R + Q L V P+ + L W K Sbjct: 233 PALLSGTDR--IATLPTRLAEQMAQRFGLRRVTCPIDLPAFSE-------HLQWQKYQES 283 Query: 301 NPKIVWLRETIKNLYASM 318 +P IVWLRE ++ M Sbjct: 284 DPAIVWLRELLRETAREM 301 >UniRef50_B5JUQ0 Transcriptional regulator, LysR family, putative n=1 Tax=gamma proteobacterium HTCC5015 RepID=B5JUQ0_9GAMM Length = 300 Score = 225 bits (574), Expect = 1e-57, Method: Composition-based stats. Identities = 64/318 (20%), Positives = 124/318 (38%), Gaps = 23/318 (7%) Query: 1 MKKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPL 60 MK ++ ++DLNL + +M++ S+ AA + ++ A S +L +LR D LFV + Sbjct: 1 MKLNLRSVDLNLFPVFEAIMEQGSLNMAACHLGMSQPAASAALKRLRLTIKDELFVRTRR 60 Query: 61 GLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTP--RGLKFELAAESPLMMIMLNALSKQ 118 GL PT + + + ++ +++ + P F++A M+ + L Sbjct: 61 GLEPTARALELYPVVHHLLESLRGEMERANQFDPLFCERIFKVAGGDYFDMVFMGRLMNM 120 Query: 119 IYQRYPQATIK-LRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFS 177 + + P+ ++ + + +SL+ I RG++D+ + L LF Sbjct: 121 LRESAPKVQVESVIHGFQESLNLIQRGKLDLCLHYDKEIAHELPTL----------KLFE 170 Query: 178 DVPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPE 237 + V + DHP + +L ++ H+ + + LD +L R + + Sbjct: 171 ESMSVLMAADHPYADKQLSLSDYIALEHVVLPKLSGNANQLDVILGGFNENRCVRARVSS 230 Query: 238 FEQSLFMAAQPDNLLLATAP-RYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHK 296 + Q L+ T P R LV P P + +P L W Sbjct: 231 VSSMVMAIKQS--YLIGTIPTRMASIL--CEGYDLVFKPFPKEAP-----PIPIYLSWAP 281 Query: 297 RNSHNPKIVWLRETIKNL 314 + + W R I +L Sbjct: 282 FSDKDSVHRWFRNMIASL 299 >UniRef50_Q5ZSZ0 Transcriptional regulator, LysR family n=4 Tax=Legionella RepID=Q5ZSZ0_LEGPH Length = 305 Score = 225 bits (574), Expect = 2e-57, Method: Composition-based stats. Identities = 62/318 (19%), Positives = 135/318 (42%), Gaps = 24/318 (7%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVN-SPLGLS 63 + L+LNLL L L+ R +T A+K++ ++ S++S L +LR F D L V + Sbjct: 1 MDKLNLNLLRALYALLTCRHLTLASKKMGISQSSMSIYLKQLREHFHDDLLVRGQGNIMQ 60 Query: 64 PTPLMVSMEQNLAEWMQMSNLLLDKPHHQTP--RGLKFELAAESPLMMIMLNALSKQIYQ 121 TPL S+ + + + L + P F + + +++ +L K++ Q Sbjct: 61 LTPLANSLIGKARQALSLIETLFNTIETFNPLISERSFSIGMTDLMSILLTPSLIKRLEQ 120 Query: 122 RYPQATIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 P + +++ Y ++++ G++D+ + +P + + LF D Sbjct: 121 EAPGVKLNIKHPSYLNTVEVFESGDIDLMIG----------MFERVPEGLKQQKLFQDEA 170 Query: 181 CVWLRKDHPALH-QTWNLDTFLRYPHISICWEQSDTW-ALDNVLQELGRERTIAMSLPEF 238 + +HP + ++ +YP I ++ + D L++LG ++ +++SL + Sbjct: 171 VIVGGNNHPGIQKGKICIEELFKYPLIQFSLRETPFYNYFDRYLRQLGHDKRVSISLGQ- 229 Query: 239 EQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRN 298 + + L + + + + L L + ++P D WH+++ Sbjct: 230 GIMPLLVLTDSHYLTLSIRKVAEKLSHLIPLSIASVPFEVDSFNC-------YQYWHQKD 282 Query: 299 SHNPKIVWLRETIKNLYA 316 +P WLRE I ++ Sbjct: 283 DADPGHRWLREMILSIAK 300 >UniRef50_A6V8B0 Transcriptional regulator, LysR family n=10 Tax=Proteobacteria RepID=A6V8B0_PSEA7 Length = 310 Score = 225 bits (574), Expect = 2e-57, Method: Composition-based stats. Identities = 72/313 (23%), Positives = 126/313 (40%), Gaps = 24/313 (7%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 ++ LDLNL +++ +ER++T+AA ++++ SAVS +LA+LR DPLFV G++P Sbjct: 10 LSRLDLNLFRVFEVVYRERNLTRAAALLHLSQSAVSHALARLREQLGDPLFVRQGRGVAP 69 Query: 65 TPLMVSMEQNLAEWMQMSNLLLDKPHHQTPR--GLKFELAAESPLMMIMLNALSKQIYQR 122 TPL + + + + + + PR F L L ++L + Q Sbjct: 70 TPLAERLAPGIRDALAGLQRSVARCQSFDPRHDARTFLLNMPEQLEPLVLPDFLGHLRQV 129 Query: 123 YPQATIKLRNWDYDSLD-AITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPC 181 PQ ++ + + L + G +D E+ A+ + L D Sbjct: 130 APQVEVRCSSLHWAELKTELEAGRIDAAV----------EVARPTDAALRRQPLLEDRLW 179 Query: 182 VWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQS 241 V P + + +L H+++ + D L +LG R + + + Sbjct: 180 VMAG---PEFAGELSAERYLAAAHVAVTSRRRGICIEDLALGQLGLTRKVRQRCQHYLSA 236 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 + AQ LL T RY + N+ L+ +PL V L W ++ Sbjct: 237 ALLVAQGGYLLTLT-RRYAELLNRGLGNRLLPMPLALPA-------VALNLYWSRQADAE 288 Query: 302 PKIVWLRETIKNL 314 P WLR + L Sbjct: 289 PGGRWLRGELMEL 301 >UniRef50_D2YJX0 Transcriptional regulator, LysR family n=1 Tax=Vibrio mimicus VM573 RepID=D2YJX0_VIBMI Length = 314 Score = 225 bits (574), Expect = 2e-57, Method: Composition-based stats. Identities = 73/318 (22%), Positives = 136/318 (42%), Gaps = 23/318 (7%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 + DLNLL +M SV KAA ++N+T +AVS++L++LR +PLF+ GL P Sbjct: 15 LRDYDLNLLTVFDAVMTLGSVNKAADKLNMTSAAVSQNLSRLRDQVGEPLFIRQGRGLQP 74 Query: 65 TPLMVSMEQNLAEWMQMSNLLLDKPHHQTP--RGLKFELAAESPLMMIMLNALSKQIYQR 122 T ++M ++++ + L+ P +F + +++L L ++I + Sbjct: 75 TQYALNMHKHVSAGLSAIRFGLETNACFDPATSTREFVIGGHGYFDLVVLPQLLRKISEV 134 Query: 123 YPQATIKLRNWDYDSL---DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 P T+ L+ ++ D ++ E D+ + L +I + + Sbjct: 135 APHITVNLKPYEDDHFTPSQVLSEREADLFLAS----------LPISHPSIITTQIAEEA 184 Query: 180 PCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFE 239 V K+HP L +T F H ++ + + ++L + R + Sbjct: 185 LVVVYAKNHPRLGETLTFQQFFDEKHTALTSRRFGHYLFSSLLDQALPARKVHYQSDSML 244 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 + A+ D LL T R + + +L L PLPF+ VP + WHK Sbjct: 245 NLMATASVTD-LLCFTPKRLADMWAE--KLGLHIQPLPFE-----MRPVPTFMCWHKAKQ 296 Query: 300 HNPKIVWLRETIKNLYAS 317 + ++WLRE I+ +++ Sbjct: 297 QDKGLIWLREQIEEVFSQ 314 >UniRef50_Q7MC61 Transcriptional regulator n=9 Tax=Gammaproteobacteria RepID=Q7MC61_VIBVY Length = 313 Score = 225 bits (574), Expect = 2e-57, Method: Composition-based stats. Identities = 72/317 (22%), Positives = 134/317 (42%), Gaps = 23/317 (7%) Query: 7 TLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTP 66 T+DLNLL ++M+ RSV +AA+ + +T AVS +L +LR + DPLF+ G++PT Sbjct: 14 TMDLNLLKTFDVVMKTRSVNEAAETLGITAPAVSHALNRLRDQYQDPLFIRQGRGITPTN 73 Query: 67 LMVSMEQNLAEWMQMS--NLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYP 124 + + + E + + + + F L++ + +++L L + Q P Sbjct: 74 FAIELHAEIQEPLSLLLNGAKSRQQFNPDTSHRTFRLSSHKDIDLMLLPPLMDHLAQHAP 133 Query: 125 QATI--KLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPC 181 + + + D D + +VD+ + E+LF Sbjct: 134 NVKLCADVEHLDERDRQADLRTRKVDMILATVPFDEH----------GYHNELLFELPLV 183 Query: 182 VWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQS 241 + R+DHP + T F H+ ++ + +D++ E +R IA + Sbjct: 184 MVCRQDHPRIQNTITHQQFFAEQHLLWETKRQNQDIVDSLALEPQPQRNIAYKTGSSCNA 243 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 + MAAQ D + + T + + HQL + +PLPF K ++P + WH + Sbjct: 244 IMMAAQTDWICV-TGQWHADLMAKAHQLQV--MPLPF-----KLNKLPIYMTWHHSQQQD 295 Query: 302 PKIVWLRETIKNLYASM 318 WL+ + A+ Sbjct: 296 SGHQWLKSALMQATATF 312 >UniRef50_B2T3Y4 Transcriptional regulator, LysR family n=3 Tax=Burkholderiales RepID=B2T3Y4_BURPP Length = 321 Score = 225 bits (573), Expect = 2e-57, Method: Composition-based stats. Identities = 70/313 (22%), Positives = 123/313 (39%), Gaps = 23/313 (7%) Query: 9 DLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLM 68 DLNLL L L+ E++VT+AA+ ++++ SA+S++L +LRA DPL V + + TP Sbjct: 24 DLNLLFALDALLTEKNVTRAARSLHLSASAMSRTLTRLRAATGDPLLVRAGRNMVLTPHA 83 Query: 69 VSMEQNLAEWMQMSNLLL---DKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQ 125 + + + + LLL + + A + L ++ P Sbjct: 84 EEIREQTHNIVLEARLLLCPSSAAADFSTLSRTLRIRANEAFVEAFGAPLIAEVTAVAPL 143 Query: 126 ATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + + S + + G D+ +L + I LF D +R Sbjct: 144 VRLHFSSKAEKSAEYLRNGSADLEIG----------VLEEMGPEIRVRALFRDRYVGVVR 193 Query: 186 KDHPA-LHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 K HP Q + + + H+ + ALD + G ERT +P F +L + Sbjct: 194 KGHPLETEQDVTIARYAAFGHVVAPHGRQIIDALDAAIALQGLERTTVAVVPSFPAALAV 253 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 A D L+A P Q L LP+ + + + +WH R ++P Sbjct: 254 AQASD--LVALLPASFANAQQSESLHSFELPVATE-------GLTISQMWHPRLENDPVH 304 Query: 305 VWLRETIKNLYAS 317 W R+ + ++ Sbjct: 305 RWFRQLVLDVCRR 317 >UniRef50_A9BZQ9 Transcriptional regulator, LysR family n=1 Tax=Delftia acidovorans SPH-1 RepID=A9BZQ9_DELAS Length = 323 Score = 225 bits (573), Expect = 2e-57, Method: Composition-based stats. Identities = 76/312 (24%), Positives = 136/312 (43%), Gaps = 25/312 (8%) Query: 9 DLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLM 68 DLNLL+ L L+ SVT+AA R++++ A+S +LA++R F DP+ V + L PTP Sbjct: 6 DLNLLIALDALLSTGSVTQAAGRMHLSTPAMSHTLARIREAFGDPILVRAGRSLVPTPRA 65 Query: 69 VSMEQNLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQIYQRYPQA 126 +++ + + + + L D G +F + A + ++ +LS+ + P A Sbjct: 66 LALAEPVRALLAQARALQDPVDAGGLAGLRRRFVVRAPEGIAVVFGASLSRALEAEMPLA 125 Query: 127 TIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRK 186 +++ + A+ G +D+ S+ + V+ +R Sbjct: 126 SLQFLPETHADPGALREGRIDLDVGS----------FRSMDPETESLVISEQTLVGVVRA 175 Query: 187 DHPALH-----QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQS 241 HP L Q + F H+ I ++ +D L+ LG +R +A+ +P + Sbjct: 176 GHPLLKSARKSQRPSAAQFAAARHVGITQRPGESSPVDAALEALGLQRQLALLVPSSFSA 235 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 L A++ D L+A P + L LV LP + Q P + WH R+ + Sbjct: 236 LIAASRTD--LVACVPTR-TAHGMAASLGLVVFALPIEVQVQ-----PMRMAWHPRHQAD 287 Query: 302 PKIVWLRETIKN 313 P WLR+ I+ Sbjct: 288 PAHQWLRDCIQR 299 >UniRef50_A6W2N0 Transcriptional regulator, LysR family n=1 Tax=Marinomonas sp. MWYL1 RepID=A6W2N0_MARMS Length = 310 Score = 225 bits (573), Expect = 2e-57, Method: Composition-based stats. Identities = 73/317 (23%), Positives = 137/317 (43%), Gaps = 19/317 (5%) Query: 4 SITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLS 63 S+ LDL L L L++ER+V +AA R+ ++ SA+S+ L +LR FDDPLF+ + G+ Sbjct: 5 SLQHLDLKSLTGLLYLLEERNVGRAADRLYLSQSAMSRLLNRLRDAFDDPLFIRTSKGMV 64 Query: 64 PTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNALSKQIYQR 122 PT +++E L ++ L + Q F + + A+++Q Y+ Sbjct: 65 PTSKALALEAPLKLMLEQLAGLWTESEFQPQSSYRTFRMQTTHYQAQAYMPAIAEQFYRE 124 Query: 123 YPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCV 182 P A+++ SL +D+ LP + + +L + Sbjct: 125 APFASLETSTLTETSLLNQAEHSLDLALCSD---------YIQLPNSFEKHLLGREKFRC 175 Query: 183 WLRKDH-PALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQS 241 + +H A+ + LD +L Y H+ + S+ D +L E RER A P + Sbjct: 176 VMSANHALAMKDSITLDDYLAYSHVLVNLGGSNPVISDALLGERARERHFAFRTPYMLAA 235 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 L + +LL++ + + + Q L + LP+ F + + W K ++ Sbjct: 236 LETVGRT-SLLMSNSGLLPERFQQQFGLVIKDLPMDFPF-------IHYYSSWPKSVEND 287 Query: 302 PKIVWLRETIKNLYASM 318 P ++W R+ + + + Sbjct: 288 PGVIWFRDICERVVKGL 304 >UniRef50_Q7WJY9 Probable LysR-family transcription regulator n=1 Tax=Bordetella bronchiseptica RepID=Q7WJY9_BORBR Length = 329 Score = 224 bits (571), Expect = 3e-57, Method: Composition-based stats. Identities = 76/320 (23%), Positives = 134/320 (41%), Gaps = 23/320 (7%) Query: 4 SITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLS 63 ++ +D+ LL L +LM ERSV++ A R++V+ AVS +LA+LR FDDPL + S G+ Sbjct: 21 AMDNIDIKLLRTLLVLMSERSVSRTADRLDVSQPAVSHALARLRILFDDPLLLRSRAGMV 80 Query: 64 PTPLMVSMEQNLAEWMQMSNLLLDKPHHQTP--RGLKFELAAESPLMMIMLNALSKQIYQ 121 PT +E + + + L +P P F L+A +++ + + + Sbjct: 81 PTDRASEIEARVRRLLAEYDALAHRPQPFDPSVSERHFVLSAPEYAEHLLMPPIFRHLRA 140 Query: 122 RYPQATIKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 P +++R D + + + + GEVD+ + L ++ LF D Sbjct: 141 HAPNIRVEVRAPDPERAYELLESGEVDLRIA----------WLRKPAQSLRSMQLFQDRI 190 Query: 181 CVWLRKDHPALHQTWNLDTFLRYPHISI--CWEQSDTWALDNVLQELGRERTIAMSLPEF 238 +DHPAL T +L FLRYPH +D ++ LG++ + F Sbjct: 191 VCIADRDHPALDGTLSLADFLRYPHARPWGMGRNMSGRVIDEAVELLGKKLAPPFLVQNF 250 Query: 239 EQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRN 298 + D L + + Q P+ L +P + + + WH+R+ Sbjct: 251 LTIPYTITGSDLLAVLPLVLARAFAAQQ---PIQILEVPLRLPRMR-----YGAYWHERS 302 Query: 299 SHNPKIVWLRETIKNLYASM 318 + WLR + + Sbjct: 303 HKDVGHKWLRSVVLQAAQGL 322 >UniRef50_Q1R0T8 Transcriptional regulator, LysR family n=9 Tax=Gammaproteobacteria RepID=Q1R0T8_CHRSD Length = 308 Score = 224 bits (571), Expect = 3e-57, Method: Composition-based stats. Identities = 68/316 (21%), Positives = 124/316 (39%), Gaps = 22/316 (6%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 + +DLNL+ L + SVT AA ++NVT +VS SL++LR FDDPLF + G++P Sbjct: 1 MRPIDLNLVRTFVTLYESGSVTLAAHKLNVTQPSVSYSLSRLRELFDDPLFSRTRDGMAP 60 Query: 65 TPLMVSMEQNLAEWMQMSNLLLDKPHHQTP--RGLKFELAAESPLMMIMLNALSKQIYQR 122 T + + + + + L H P +F LA +L + + + Sbjct: 61 TFCAMRLYTSFRQALTQIEQTLSDAQHFDPEQSQRRFRLALTDLGETTLLAPILRHMRDL 120 Query: 123 YPQATIKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPC 181 P +++ + D + VD R+ S + + Sbjct: 121 APGVELEVVPLEIDKVVSWFDNKSVDAVICSRDIQAPSLG----------RRPIIEERYV 170 Query: 182 VWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQS 241 L + HP + QT +++ F R H+ + + +++VL+E R +++ +P F Sbjct: 171 GLLGRRHPRIGQTLSMEAFSREDHVQVSPT-TGHGLVEDVLKERDITRKVSVVVPHFSAL 229 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 + + +LL + + Q L V LP V L W ++ + Sbjct: 230 PRLL-ESTSLLAILPEQIAGLFTQQADLKQVELPFDIP-------PVEVALYWSRQVDDS 281 Query: 302 PKIVWLRETIKNLYAS 317 W R T+ + Sbjct: 282 AAQEWFRRTLIEATSR 297 >UniRef50_Q0K3U9 Transcriptional regulator, LysR-family n=2 Tax=Betaproteobacteria RepID=Q0K3U9_RALEH Length = 311 Score = 224 bits (571), Expect = 3e-57, Method: Composition-based stats. Identities = 67/319 (21%), Positives = 121/319 (37%), Gaps = 27/319 (8%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 +DLNL++ L +L++ERSV++AA R+++ AVS +LA+LR FDDPL V + G+ P Sbjct: 8 FRGVDLNLMVTLTVLLRERSVSRAAARLHLGQPAVSGALARLREMFDDPLLVRTAHGMEP 67 Query: 65 TPLMVSMEQNLAEWMQMSNLLLDKPHHQTP--RGLKFELAAESPLMMIMLNALSKQIYQR 122 T + +E+ L + L + P F + + + + + + Sbjct: 68 TERALELERRLLPALGEIEAALLQRRDFDPLTSDRTFVVGMPDWVELWLAPRILPSLSTC 127 Query: 123 YPQATIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPC 181 P + + D + + R E+D+G R + Sbjct: 128 APGVRLAIVPTDPFRGTEMLERNEMDLGIGPFAKGAAWR----------RERAWQTMGFR 177 Query: 182 VWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQS 241 Q +L +LR+PH+ + + + D L G+ R + S F Sbjct: 178 CVYGAAPLDACQILSLQDYLRFPHVLVSYRGAFDSTADTWLATQGQARDVRYSSARFASV 237 Query: 242 LFMAAQPDNLLLATAPR-YCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 + LAT P + L + P+P + T +W + Sbjct: 238 PAILKGT--AALATVPAVLADQWCATEGLRQLPCPVPMP-------DFTVTAVWSAARDN 288 Query: 301 NPKIVWLRETIKNLYASMA 319 + ++WL N +A +A Sbjct: 289 DAGLMWL----ANTFAGLA 303 >UniRef50_A7K354 LysR substrate binding domain protein n=17 Tax=Gammaproteobacteria RepID=A7K354_VIBSE Length = 314 Score = 224 bits (571), Expect = 4e-57, Method: Composition-based stats. Identities = 70/315 (22%), Positives = 117/315 (37%), Gaps = 21/315 (6%) Query: 6 TTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPT 65 +DLNLL+ L + RSV+ AA++ V+ SA+S SL++LR FDDPLF + PT Sbjct: 16 RNIDLNLLVTFSYLYRYRSVSVAAEKSYVSQSAMSHSLSRLRLLFDDPLFERKGHKMEPT 75 Query: 66 PLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKF--ELAAESPLMMIMLNALSKQIYQRY 123 + + + L P + I L +I QR Sbjct: 76 EHAHHIAPTVHHLLDSIAKDLLTKSAFQPENYAGICRIGLTDYAEFIFAPRLYDEIRQRA 135 Query: 124 PQATIKLRNWDYDSLDAITRGE-VDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCV 182 P+A I N + + A+T E +D+ + E L L+++ Sbjct: 136 PEAQISFINVNRSNYVALTEHEKLDVIIGSMPVLDDNFESLY----------LYTEKHVC 185 Query: 183 WLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 K +L+ F + + S +D L E G R + ++ F Sbjct: 186 MCDKQVLKGETQLSLEAFANIEQALVSPDGSLKTQVDQKLAEHGLSRKVTVASRNFLTIR 245 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 + + D L+A P L+ + P + + +LWH ++ Sbjct: 246 HLLKKRD--LIAIVPEKMALAEGFSD-DLITVNPPIAVA-----DFDIAMLWHSSRNNED 297 Query: 303 KIVWLRETIKNLYAS 317 K +WLRE + + S Sbjct: 298 KGIWLRELVSSTITS 312 >UniRef50_Q7MQI2 Transcriptional regulator n=36 Tax=Gammaproteobacteria RepID=Q7MQI2_VIBVY Length = 321 Score = 224 bits (571), Expect = 4e-57, Method: Composition-based stats. Identities = 81/313 (25%), Positives = 131/313 (41%), Gaps = 23/313 (7%) Query: 9 DLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLM 68 DLNLL+ L++L++E SV+KAA R+N++ SA+S+ L +LR DPLF L PT Sbjct: 18 DLNLLVALRVLIEESSVSKAAVRLNLSQSAMSRVLGRLRDLLGDPLFTREGQHLLPTEKA 77 Query: 69 VSMEQNLAEWMQMSNLLLDKPHHQTPR--GLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + +++ L E ++ LL P P F +A M +L +IYQ P Sbjct: 78 LEIDRALGEPLESLRQLL-SPSEFDPHLCTQTFTIATTDYAMQTILPFALPRIYQEAPNV 136 Query: 127 TIKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + +D L D +T D+ R PL EVL L Sbjct: 137 SFHFLPLQHDRLADQLTYEGADLAIC--------RPTGPVEPL--RSEVLGRVGVLCLLS 186 Query: 186 KDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMA 245 K HP + +L +L YPH I ++ L + +R + + E +L + Sbjct: 187 KQHPLAGKEMSLADYLYYPHAMIAISDGVKALIEQALVDQ-PQRKMVLRAYHLEAALAIV 245 Query: 246 AQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIV 305 L++ + + L + ALP F ++++WH R H+P Sbjct: 246 -DTMPLIITVPADLAYLVAERYDLVVKALPFQF-------TPFDYSMIWHPRCEHSPAQE 297 Query: 306 WLRETIKNLYASM 318 WLR ++ + + Sbjct: 298 WLRSVVREECSRL 310 >UniRef50_Q471I4 Regulatory protein, LysR:LysR, substrate-binding n=1 Tax=Ralstonia eutropha JMP134 RepID=Q471I4_RALEJ Length = 323 Score = 224 bits (571), Expect = 4e-57, Method: Composition-based stats. Identities = 80/317 (25%), Positives = 130/317 (41%), Gaps = 23/317 (7%) Query: 6 TTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPT 65 L LN LL L +L+ ERS+TKAA+ +N+T A+SK+LA+LR +F DPLFV L + PT Sbjct: 10 DELSLNQLLVLDVLLSERSLTKAARVLNLTQPALSKTLARLRQYFGDPLFVRVGLRMEPT 69 Query: 66 PLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQIYQRY 123 P + + + +Q L PR F ML L ++ + Sbjct: 70 PKALELADPVRGILQSVRALRSDHVGFDPRTSQRSFSFFLLDAGASQMLPPLLSRLAEEA 129 Query: 124 PQATIKLRNWDYDSLD-AITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCV 182 P ++ N D LD + G VD+ L +I ++L+ + Sbjct: 130 PGILVQAVNADATHLDIWLENGLVDLAIGS----------FPGLTQSIRRQLLWHETYGA 179 Query: 183 WLRKDHPALHQTWNLDTFLRYPHISICWEQSD--TWALDNVLQELGRERTIAMSLPEFEQ 240 +RKDHP L Q +LD F+ H+ + + +++ ++ I +P F Sbjct: 180 VVRKDHPRLAQLGDLDAFVAEKHVLVSAVGTGHQHLSIERAIEAAVPHTNIICRVPSFAT 239 Query: 241 SLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 + +A D + + + + L +V PL + WH R Sbjct: 240 AGLIAKHSDAVAVLPL-TLARALCKDLDLTVVMPPLTLP-------GMDIAQHWHDRVHR 291 Query: 301 NPKIVWLRETIKNLYAS 317 P W+R + L+A Sbjct: 292 EPGNQWIRALVHRLFAR 308 >UniRef50_Q4KKE5 Transcriptional regulator, LysR family n=27 Tax=Proteobacteria RepID=Q4KKE5_PSEF5 Length = 308 Score = 223 bits (570), Expect = 4e-57, Method: Composition-based stats. Identities = 74/306 (24%), Positives = 132/306 (43%), Gaps = 19/306 (6%) Query: 9 DLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLM 68 D+NLL+ L L+ E SV AA+R+N++P+A+S++L ++R DP+ V + GL PTP Sbjct: 5 DMNLLVALDALLDEGSVVGAARRMNLSPAAMSRTLTRIRDALGDPVLVRAGRGLVPTPKA 64 Query: 69 VSMEQNLAEWMQMSNLLLDKPHHQT--PRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + + + ++ + L+ +F + A + + L + ++ P Sbjct: 65 LELRSQVRDVVEQAALVFRSADKVDLGSLQRRFNVRANDFFVGVYGGRLIDTLERQAPLC 124 Query: 127 TIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRK 186 ++ +A+ G +D+ S L + + LF+ +R+ Sbjct: 125 ELRFVPEGDGDDEALREGRIDLRISNT----------RPLTPEVKVQNLFTTAFVGLVRE 174 Query: 187 DHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAA 246 HP L + + F +PHIS+ +D L E G ER + + P F ++FM Sbjct: 175 GHPLLDEDITAERFAAFPHISMSRRGIARGPIDAALAEQGLERRVPLIAPSFHAAMFML- 233 Query: 247 QPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVW 306 PD+ L+ P+ L L + LP + T WH R +P W Sbjct: 234 -PDSDLILPVPQETLLSVSRLGLRLRSFVLPISLPT-----LVLTQAWHPRYDKDPAHKW 287 Query: 307 LRETIK 312 RET++ Sbjct: 288 FRETLR 293 >UniRef50_A0K340 Transcriptional regulator, LysR family n=1 Tax=Burkholderia cenocepacia HI2424 RepID=A0K340_BURCH Length = 303 Score = 223 bits (570), Expect = 4e-57, Method: Composition-based stats. Identities = 71/318 (22%), Positives = 133/318 (41%), Gaps = 22/318 (6%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 LDLNLL+ L L+ +R +T+AA+R+N++ SA+S LAKLR +FDD L V L Sbjct: 3 FNRLDLNLLVTLDALLDDRRITRAAERLNLSQSAISGMLAKLREYFDDELLVPVGRNLEL 62 Query: 65 TPLMVSMEQNLAEWMQMSNLL--LDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQR 122 TPL + Q + + + + +D F++A ++ ++++ L I Sbjct: 63 TPLARELVQPVRDLLLQVQTIVAIDPAFEPANARRHFKIATSDYVINVLMHRLIPVIEPL 122 Query: 123 YPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCV 182 P T++L + D+ + + RGE D ++ LF D Sbjct: 123 APYLTLELMPQE-DAPERLRRGEYDFLIIPEPFKADDHPAIA----------LFDDSYVG 171 Query: 183 WLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALD-NVLQELGRERTIAMSLPEFEQS 241 + + A+ + ++ + + H++ + D ++ G R + ++ +F Sbjct: 172 VVWNGNRAVGASIDVARYEQLDHVATLLGWPRLPSYDSRYVEAQGIRRRVRVTTSDFTSM 231 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 + ++ R + L LV L P + ++ L WH+ + Sbjct: 232 APVLIGT-QMIATMHRRLATELTRRMPLRLVELEFPIPQMRE-------FLQWHEYREKD 283 Query: 302 PKIVWLRETIKNLYASMA 319 P WLRE I ++ A +A Sbjct: 284 PCHRWLREQIISVAAGLA 301 >UniRef50_C6XR04 Transcriptional regulator, LysR family n=1 Tax=Hirschia baltica ATCC 49814 RepID=C6XR04_HIRBI Length = 302 Score = 223 bits (570), Expect = 5e-57, Method: Composition-based stats. Identities = 73/310 (23%), Positives = 127/310 (40%), Gaps = 24/310 (7%) Query: 6 TTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPT 65 LDLNLL + + +E+++T+AA ++++PSAVS +L +LRA +DPLFV + PT Sbjct: 9 DRLDLNLLKVFEAVYREQNLTRAANLLSLSPSAVSHALRRLRAHLNDPLFVKEGRIMRPT 68 Query: 66 PLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGLK--FELAAESPLMMIMLNALSKQIYQRY 123 P+ M +L + + LL P K F + + ++ ++I Q Sbjct: 69 PVCARMAPDLLDEIDRLRALLQSWGKFDPAQSKIVFTIGMPDAMEIVFFPEFVEKIRQLA 128 Query: 124 PQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVW 183 P I +D + + A G + + P S++L + L +D C Sbjct: 129 PNVRIISARYDRNEMVASLSGHT-LDICVDIALPTSKQL--------RHHPLTADDWC-I 178 Query: 184 LRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 + K H +L HI++ T D+ L++ G R + + + +L Sbjct: 179 VSKTHTIQ----TAADYLAQEHIAVSARTVGTVLEDSALEQRGIFRDVRVRCQNYLSALA 234 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 + + D +L R Q Q L + +P + L WH N + Sbjct: 235 IVERSDRIL-TMPKRLAQSMIQSRPLKIQDVPFSMP-------PIELNLYWHSDNEADSA 286 Query: 304 IVWLRETIKN 313 WLRE + + Sbjct: 287 NKWLREIVID 296 >UniRef50_B1LYW9 Transcriptional regulator, LysR family n=10 Tax=Rhizobiales RepID=B1LYW9_METRJ Length = 333 Score = 223 bits (569), Expect = 7e-57, Method: Composition-based stats. Identities = 86/315 (27%), Positives = 141/315 (44%), Gaps = 21/315 (6%) Query: 4 SITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLS 63 ++ +DLNLL+ L L+ ERSVT+AA R+ + SA+S SLA+LR FDD L +P G+ Sbjct: 28 DLSRIDLNLLVALDALLDERSVTRAAARVGIGQSAMSSSLARLRRLFDDELLTRAPDGMR 87 Query: 64 PTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQIYQ 121 PTP + + + L ++ L+ + P F ++ + ++ L Q+ + Sbjct: 88 PTPRALRIAEPLRSTLRQVQALVHREEQFDPATVARTFTVSLPDSVEALLGPRLIAQLRR 147 Query: 122 RYPQATIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 P + LR+ D LD + VD+ L S L +L+ D Sbjct: 148 DAPGIRLLLRSVDRTRILDELDADRVDLAIG----------LFSEGQLHHKQRLLYRDSY 197 Query: 181 CVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQ 240 V L LD +LR+PH+ ++ +D+ L +GR RT+A++ P F Sbjct: 198 VVLFNAALIGLEPPIGLDDYLRFPHVLTSLRETAHGVVDDALALIGRSRTLAVTTPRFLV 257 Query: 241 SLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 FM + ++ R + L + +P+P D +V ++LWH H Sbjct: 258 VPFMV-RAAPVIATMHARLATSFASALALSVSPVPVPLD-------DVSVSMLWHASYDH 309 Query: 301 NPKIVWLRETIKNLY 315 +P WLRE + L Sbjct: 310 DPAHRWLRELLVRLA 324 >UniRef50_Q1Z9L0 Putative transcriptional regulator, LysR family protein n=1 Tax=Photobacterium profundum 3TCK RepID=Q1Z9L0_PHOPR Length = 320 Score = 223 bits (568), Expect = 7e-57, Method: Composition-based stats. Identities = 90/323 (27%), Positives = 150/323 (46%), Gaps = 16/323 (4%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFD----DPLFVNS 58 +I +DLNLL + LL++E SV+ A R+N+T SAVSK L +LR DPLFV + Sbjct: 1 MNINHIDLNLLRLMLLLLEEGSVSSVATRLNLTQSAVSKQLTRLREQLGGELNDPLFVRT 60 Query: 59 PLGLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALS 116 GL PT V +EQ L W+Q S + P P +F+++ +++ L Sbjct: 61 GRGLEPTAQAVKLEQPLRHWLQSSQKMFV-PDTFIPAEDKREFQISICETSFSVVVPLLL 119 Query: 117 KQIYQRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDY-EVL 175 ++++ P I + + DSL + G++D+ +++ R++ L L Sbjct: 120 PKLHRLAPGMKINIVSKSADSLQRLREGQLDLLVIAKDTDQRAQISSQVTELKRQSNHEL 179 Query: 176 FSDVPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSL 235 + D LR +HP L + W FL+ P I + E++ W LD V+ E G + Sbjct: 180 YQDHHVCLLRSEHPILEKKWGNAAFLQVPQIRVLVEENKFWLLDQVVAESGHCLDSKTIV 239 Query: 236 PEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWH 295 P+F + + D +L+ T+ + + + + L LPLPF V + +LW Sbjct: 240 PDFNSAALLVQHTDMMLVCTS-IFARKLAKSYSLQ--QLPLPF-----NLKPVSYRMLWP 291 Query: 296 KRNSHNPKIVWLRETIKNLYASM 318 + H+ +WLR I + Sbjct: 292 ETLEHDAAHLWLRGIISGCCQEL 314 >UniRef50_A1K8D7 Transcriptional regulator, LysR family n=1 Tax=Azoarcus sp. BH72 RepID=A1K8D7_AZOSB Length = 298 Score = 222 bits (567), Expect = 1e-56, Method: Composition-based stats. Identities = 73/318 (22%), Positives = 133/318 (41%), Gaps = 26/318 (8%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 +I ++DLNLL + + ER+V++AA R+ +T +VS L +LR F DPLFV + G+ Sbjct: 1 MNIQSVDLNLLKIFEAVYLERNVSRAAVRLELTQPSVSHGLTRLRLLFGDPLFVRTRSGV 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTP--RGLKFELAAESPLMMIMLNALSKQIY 120 PT + + + + +++ LD+ H P G F L +I L L + + Sbjct: 61 EPTVVADRIAGPVQQALRVLQTTLDEHAHFEPASSGRTFRLHMSDFGEVIFLPKLMRALL 120 Query: 121 QRYPQATIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 +R P I+ R + A+ G++D+ L L + L +D Sbjct: 121 ERAPGVRIETRQLGGVELAAALDSGQIDLAIG----------YLPVLDQGFECRHLLADE 170 Query: 180 PCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFE 239 V + H + F I++ +L+E G + + +P F Sbjct: 171 YAVIAPR-HLIPSGGKGDNAFNGLDFIAVTSHPQTL----AILRECGLLDRVKLWVPHFM 225 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 + A+ + A APR + + + + PLP + + L W++R + Sbjct: 226 VVPAILAERN--FAAVAPREV-VHAFSPRSRVRSFPLP-----ALQRGMDVNLYWNRRYT 277 Query: 300 HNPKIVWLRETIKNLYAS 317 +P W+RE + +L+ Sbjct: 278 GDPGHAWMRELVADLFDR 295 >UniRef50_Q15TE0 Transcriptional regulator, LysR family n=4 Tax=Alteromonadales RepID=Q15TE0_PSEA6 Length = 307 Score = 222 bits (567), Expect = 1e-56, Method: Composition-based stats. Identities = 71/321 (22%), Positives = 133/321 (41%), Gaps = 22/321 (6%) Query: 1 MKKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPL 60 M + +DLNL L L + QE S+T A KR++++ AVS +L++LR + DPLFV Sbjct: 1 MNMLHSKIDLNLFLILVAVYQEGSITGAGKRLHLSQPAVSHALSRLRDKYQDPLFVRHGR 60 Query: 61 GLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQT--PRGLKFELAAESPLMMIMLNALSKQ 118 + T L ++ + + L + + L I L+ Sbjct: 61 KMIATQLCQTIMPRVLSSVAELESTLHDIGDFDVHQYQREMKFGFRDILESIFFPELATD 120 Query: 119 IYQRYPQATIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFS 177 + P T+ R D A+ +DI ++L+ I + ++ Sbjct: 121 LMANTPNITVHSRQVSRLDMEAALESQALDIVI----------DVLTPTSNDIHHTLICD 170 Query: 178 DVPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPE 237 + + RK HP L +L +++ H + ++ S +D L + R A+ Sbjct: 171 EHFSLICRKGHPILSD-MSLANYIKAEHALVTFKDSAVNTVDMALAKHAVARKFALKCEH 229 Query: 238 FEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKR 297 + + + ++ D +LL Y + Q Q+P+ +PLPF+ +P + WHK+ Sbjct: 230 YFAATSVISRCD-MLLTMPNAYARLLKQ--QMPVEVVPLPFEVPI-----LPVHMYWHKQ 281 Query: 298 NSHNPKIVWLRETIKNLYASM 318 H+P W+R+ + + + Sbjct: 282 AEHDPLNSWMRQKLLAIAKRV 302 >UniRef50_B5ZKB2 Transcriptional regulator, LysR family n=2 Tax=Gluconacetobacter diazotrophicus PAl 5 RepID=B5ZKB2_GLUDA Length = 317 Score = 222 bits (567), Expect = 1e-56, Method: Composition-based stats. Identities = 83/323 (25%), Positives = 135/323 (41%), Gaps = 21/323 (6%) Query: 1 MKKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPL 60 M DLNLL + +L++E SVT AA+R+ V+ + +S++L++LR F D + V S Sbjct: 1 MAHVAHGYDLNLLQAMNVLVEESSVTGAAERLQVSAATMSRTLSRLRETFHDAILVQSGR 60 Query: 61 GLSPTPLMVSMEQNLAEWMQMSNLLLDKPH--HQTPRGLKFELAAESPLMMIMLNALSKQ 118 + PTP + M+ +++ + + L H T F + A ++ AL + Sbjct: 61 HMVPTPRALQMQPRVSQILSAISDLYRPRHALDFTGLTPTFRIRAADVVIGSYAEALLRA 120 Query: 119 IYQRYPQATIKLR-NWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFS 177 + P T+ + D D + +G +D+ + L I + LF Sbjct: 121 LRADCPDTTLIFTAESNSDDSDFLRQGGIDLYIGAT----------ALLRPEIMRQTLFE 170 Query: 178 DVPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQEL-GRERTIAMSLP 236 +R HP L + Y HI++ +D VL + G ERT+A+ L Sbjct: 171 SRFRGVVRAGHPILLGKITPQALVAYEHIAVSRRGRRRGPIDEVLADQYGLERTVALLLT 230 Query: 237 EFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHK 296 F +L +Q D L+ AP L +L L PLP D V WH Sbjct: 231 SFYAALQGLSQTD--LILPAPDILTDAAMLDRLGLYGFPLPLDLE-----PVTIFQAWHP 283 Query: 297 RNSHNPKIVWLRETIKNLYASMA 319 R+ + WLR T+ + + A Sbjct: 284 RHDTDQVHQWLRRTVLRVMSPRA 306 >UniRef50_C6B2W9 Transcriptional regulator, LysR family n=4 Tax=Rhizobiaceae RepID=C6B2W9_RHILS Length = 334 Score = 222 bits (565), Expect = 2e-56, Method: Composition-based stats. Identities = 68/323 (21%), Positives = 133/323 (41%), Gaps = 33/323 (10%) Query: 4 SITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLS 63 ++ +DLNLL+ + +M+ER V ++ +R+N++PSA+S L +LR DPLF+ +P G+ Sbjct: 6 DLSRIDLNLLVLFETVMEERHVGRSGQRLNLSPSAISHGLGRLRMLLGDPLFLKTPKGVV 65 Query: 64 PTPLMVSMEQNLAEWMQMSNLLLDKPHHQTP--RGLKFELAAESPLMMIMLNALSKQIYQ 121 PT + +A+ + ++ P +F + A + + L L + + Sbjct: 66 PTDRAEELAAPIADILARVRSVVATAEPFDPAHSQRRFTIGAPDGVSSVFLPPLLDLLAK 125 Query: 122 RYPQATIKLRNWDY------------DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLA 169 P I +R D+L A+ ++DI + + P+ Sbjct: 126 FAPGIAISVRQLLPKQGEPSPDLAWRDALAALEARDMDIAIIPQ----------AGFPIR 175 Query: 170 IDYEVLFSDVPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRER 229 +L+ + + R+ HP L L T+ H+ + +DN+L G R Sbjct: 176 FASLLLYEEDFVIAARQCHPFLIDQ-TLATYCAAQHLVVSHLGDTHGFVDNLLASHGCSR 234 Query: 230 TIAMSLPEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVP 289 +A+++P F +L + A+ D + A R+ + + + V PLP Sbjct: 235 RVALTVPNFMLALAVLAETDF-ISALPRRFVEMHAARFGVVSVNPPLPLGRFAINATAPK 293 Query: 290 FTLLWHKRNSHNPKIVWLRETIK 312 + + + WL ++ Sbjct: 294 AAI-------RDEGVAWLVRLLQ 309 >UniRef50_A4WEP5 Transcriptional regulator, LysR family n=1 Tax=Enterobacter sp. 638 RepID=A4WEP5_ENT38 Length = 308 Score = 222 bits (565), Expect = 2e-56, Method: Composition-based stats. Identities = 67/301 (22%), Positives = 128/301 (42%), Gaps = 21/301 (6%) Query: 21 QERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSMEQNLAEWMQ 80 +E SV++AA+++++ AVS +LA+LR F+DPLFV + G+ PTP ++ L M+ Sbjct: 25 REGSVSRAAEKLHLGQPAVSNALARLREMFNDPLFVRTAGGMIPTPRAEALIAELGPLME 84 Query: 81 MSNLLLDKPHHQTPRGLK--FELAAESPLMMIMLNALSKQIYQRYPQATIKLRNWDY-DS 137 +L +P TP F L + ++ L + + P T+++ D Sbjct: 85 QMQHVLFQPASFTPASASHVFRLGMSDWVESWLMPELQAYVIREAPGITLQVSASDPFRD 144 Query: 138 LDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPALHQTWNL 197 + + E+D+ S +S + E + S + +L + Sbjct: 145 GKQVLQREIDLAISVGQSTAATL----------RRENIRSLNFSTLWHPEQLSLAAPLTV 194 Query: 198 DTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQPDNLLLATAP 257 ++ + H+ + + S A+D+ L G+ R + P F + + LAT P Sbjct: 195 KNYVEHDHVLVSYRGSAWSAIDDQLALQGQSRKVRYVTPHFSSLPPLLKR--IPALATVP 252 Query: 258 RYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWLRETIKNLYAS 317 + L P+P E+P +LLWHK++ ++ + WLR + + + Sbjct: 253 SGLAA-AWVTHYGLRCSPVPIQTP-----EIPLSLLWHKKSDNDMPLNWLRGVLGRVIKA 306 Query: 318 M 318 + Sbjct: 307 L 307 >UniRef50_B5ZKC3 Transcriptional regulator, LysR family n=7 Tax=Proteobacteria RepID=B5ZKC3_GLUDA Length = 323 Score = 222 bits (565), Expect = 2e-56, Method: Composition-based stats. Identities = 67/299 (22%), Positives = 114/299 (38%), Gaps = 22/299 (7%) Query: 21 QERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSMEQNLAEWMQ 80 E SV +AA R+N++ A+S+ L +R DP+FV + L PTP +M + E + Sbjct: 28 TEGSVARAAARMNLSTPAMSRILGHIRDLTGDPIFVRAGRSLVPTPRAEAMRLPVRELVA 87 Query: 81 MSNLLLDKPH--HQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQATIKLRNWDYDSL 138 + +L F L A + L+ + P+ ++ +S+ Sbjct: 88 RARSILGNAGDLDLDRLDRTFTLRATDSFIGSFGPRLAGHLTTLAPKVRLRFVPQRDESV 147 Query: 139 DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPALHQTWNLD 198 D + G+VD+ +S I + + SD +R HP Sbjct: 148 DDLREGQVDLDIGA----------ISHTGPEIMTQTILSDRFVGVVRPGHPLSSGRITSA 197 Query: 199 TFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQPDNLLLATAPR 258 F R HIS +D L L R + +P F +L A Q + L+A P Sbjct: 198 RFSRQRHISASRRGRMHGPVDQALGSLNLSRNVVTIVPTFSDALLFARQSE--LVAVVP- 254 Query: 259 YCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWLRETIKNLYAS 317 ++ + +V+ PLP + + + WH R + WLR ++ + A Sbjct: 255 --DRLTEVARQDMVSFPLPVETGL-----LIISQAWHPRFQADATHQWLRACVREICAE 306 >UniRef50_B0KG68 Transcriptional regulator, LysR family n=9 Tax=Pseudomonas RepID=B0KG68_PSEPG Length = 324 Score = 221 bits (564), Expect = 2e-56, Method: Composition-based stats. Identities = 80/322 (24%), Positives = 143/322 (44%), Gaps = 25/322 (7%) Query: 1 MKKS-ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSP 59 M ++ + D+NL++ + LMQER++T+AA+++ V VS +LA+LRA F+DPL V Sbjct: 16 MNRNELRKADINLMVVFEALMQERNLTRAAEKLFVAQPTVSAALARLRAMFNDPLLVRVG 75 Query: 60 LGLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTP--RGLKFELAAESPLMMIMLNALSK 117 + P+ + + L + ++ L H P + F + + +L L + Sbjct: 76 NRMEPSARAEEVIKYLTPALDAMSVALSLTHDFDPLTSKMTFRIGLSDDVESGLLPPLLR 135 Query: 118 QIYQRYPQATIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLF 176 + P + +++ DY D + G+V +G S + LP +VL Sbjct: 136 ALRVEAPNVVVVVQHVDYWRIPDLLAAGDVTVGISQTK----------GLPANAKRKVLR 185 Query: 177 SDVPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLP 236 + V +R D LD F PH+ + + +D+ L+E+GRER + +S+P Sbjct: 186 TMQGRV-VRAD--KSATPLTLDEFCARPHVQVSPTANTQGVVDDWLKEIGRERKVVLSVP 242 Query: 237 EFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHK 296 +F + A D LLA P Y + L A LPF+ + + ++W Sbjct: 243 QFSSLPAILAGTD--LLACCPDYAAQGMERWG-NLQAEQLPFETT-----ALELAMVWLS 294 Query: 297 RNSHNPKIVWLRETIKNLYASM 318 +P WLR +++ + Sbjct: 295 TTDSDPAERWLRSRLEHYMGGV 316 >UniRef50_A4SH82 Transcriptional regulator, LysR family n=2 Tax=Aeromonas RepID=A4SH82_AERS4 Length = 324 Score = 221 bits (564), Expect = 2e-56, Method: Composition-based stats. Identities = 72/318 (22%), Positives = 135/318 (42%), Gaps = 21/318 (6%) Query: 1 MKKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPL 60 M+ ++ LDLNLL +LMQER+VT+AA+R++++ S VS +L +LR DDPLFV S Sbjct: 1 MELPLSRLDLNLLTVFDMLMQERNVTRAAERLHLSQSTVSHALGRLRQALDDPLFVMSRR 60 Query: 61 GLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGLK--FELAAESPLMMIMLNALSKQ 118 + PT ++ + + + M L + P + F +A + ++ AL +Q Sbjct: 61 EMMPTERAKTLAGPVRQALAMLEQGLRQAEGFDPASARRIFRIATPGSVEHGLVPALVEQ 120 Query: 119 IYQRYPQATIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFS 177 ++++ P +++ D D + +GE+D+ +++ S L E F+ Sbjct: 121 LHRQAPHCRLEVCELADSDYERELEKGELDLVIGFADANHFSPRL--------WREPWFN 172 Query: 178 DVPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPE 237 + L + + PHI +D L G ER + + LP Sbjct: 173 NPLVCLSPLGS-ELPEVLGPAELVSRPHIHTSSWGHSQAMVDLWLARFGVERELGVRLPS 231 Query: 238 FEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKR 297 F + A L+ +++ + + L L L ++ + + + H Sbjct: 232 FMAVPPLMA-TGRYLVVVPEMIGRHFCRYYPLRLHQL--------NPEIPIVYLMAGHPL 282 Query: 298 NSHNPKIVWLRETIKNLY 315 +H+ I W + + L Sbjct: 283 TAHDQAIGWFKGLLHRLA 300 >UniRef50_A5VCH0 Transcriptional regulator, LysR family n=1 Tax=Sphingomonas wittichii RW1 RepID=A5VCH0_SPHWW Length = 327 Score = 221 bits (564), Expect = 2e-56, Method: Composition-based stats. Identities = 78/333 (23%), Positives = 137/333 (41%), Gaps = 42/333 (12%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 +LDLNLL L +E SVT AA + +TPSAVS SL +LR D LF+ G++P Sbjct: 6 FRSLDLNLLRVFDALTEEGSVTGAAGLLGLTPSAVSHSLNRLRHILKDDLFLRGAKGMNP 65 Query: 65 TPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG-LKFELAAESPLMMIMLNALSKQIYQRY 123 TP +++ + + L+ + +F +A + +++ + + + Sbjct: 66 TPKALALAVPIRRALVDIQQALNGDSFVPEKTDRRFSIACGDYVTAVLMPEVIARFRKAA 125 Query: 124 PQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVW 183 P A ++++ + + G +D+ G E P E LF+D Sbjct: 126 PLAELRIQPVGA-VMKELDAGRIDLAMGGFERIPERLA----------SEPLFADDMVWV 174 Query: 184 LRKDHPALHQTWNLDTFLRYPHISICWEQSDT--------------------WALDNVLQ 223 +R D P ++ L+ PH++I +D LD + Sbjct: 175 MRADSPFANRQPTLEGLAALPHLAIASPDNDRAVSGIVSDAGLERRVVRDDPRILDQYFE 234 Query: 224 ELGRERTIAMSLPEFEQSLFMAAQPDNLLLATAPR-YCQYYNQLHQLPLVALPLPFDESQ 282 E G RT+AM+ P ++ + A+ D L A PR + + ++L L P P Sbjct: 235 ERGLRRTVAMTAPNPIVAMAIVAECD--LAAMMPRNLAEAFADRYKLALWKPPHP----- 287 Query: 283 QKKLEVPFTLLWHKRNSHNPKIVWLRETIKNLY 315 + +WH+ + P + WLR I+++ Sbjct: 288 --SALFQISTVWHRWHGDQPAVDWLRAMIRSVA 318 >UniRef50_A8IJ97 Putative transcriptional regulator n=1 Tax=Azorhizobium caulinodans ORS 571 RepID=A8IJ97_AZOC5 Length = 324 Score = 221 bits (564), Expect = 2e-56, Method: Composition-based stats. Identities = 82/322 (25%), Positives = 127/322 (39%), Gaps = 27/322 (8%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 I D LLL + LM T AA+R+ +T S VS +L +LR DPLF P GL Sbjct: 6 NHIRRFDGALLLVFRELMATGQTTAAARRLGLTQSTVSHALRRLRDLTGDPLFQRRPDGL 65 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTP--RGLKFELAAESPLMMIMLNALSKQIY 120 +PTP + + E +++S L +P P F +A + ++ L+ + Sbjct: 66 TPTPRAHELLPIVVEMLRLSQALKGEPGEFDPAASTRHFRIAGPDIVSTVLAGPLAHRFA 125 Query: 121 QRYPQATIKL-RNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 Q P A + +L+A+ RGE+D+ S+P L+ + Sbjct: 126 QHAPNARLSFGFIVGAAALEALRRGEIDMAIG----------HFPSVPRGFAASTLWEEE 175 Query: 180 PCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFE 239 RK HP +L +L H+ + + T +D VLQ LG R + S P F Sbjct: 176 FVAIARKGHPRFP-PLDLAGYLAADHVLVSFSGRFTGVVDRVLQPLGLARRVVASFPLFL 234 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 AQ D + A C+ + + L LP+P + V R + Sbjct: 235 SVFDAVAQSDA-VAAVPYSLCERHAE--TFGLARLPMPIAVPGFPIVSV--------RRA 283 Query: 300 H--NPKIVWLRETIKNLYASMA 319 + WL I+ + A A Sbjct: 284 GVPDGGYEWLEALIRRMVAEYA 305 >UniRef50_Q2BMZ3 Putative transcriptional regulator, LysR family protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BMZ3_9GAMM Length = 303 Score = 221 bits (564), Expect = 2e-56, Method: Composition-based stats. Identities = 59/300 (19%), Positives = 118/300 (39%), Gaps = 18/300 (6%) Query: 18 LLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSMEQNLAE 77 ++++ER VT+AA+R+++T SA+S+ L++LR F DPL + + + + Sbjct: 14 VMLEERHVTRAAERLHLTQSALSRQLSQLREHFSDPLLIREGNEYLLSARAKQLLPKIQA 73 Query: 78 WMQMSNLLLD-KPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQATIKLRNWDYD 136 + + L + +F A + + + ++ P I W + Sbjct: 74 ILTEVDELSEGDSFDPLQCRRRFSFACTDHVAQFIFPEILGRLRDEAPGIDITFEMWRPE 133 Query: 137 SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPALHQTWN 196 L + + +DI ++LP + + D P + ++HP + Sbjct: 134 WLGRLGQLPLDIA----------STTTANLPENVRSIHIGQDSPVCLMAENHPLAACELS 183 Query: 197 LDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQPDNLLLATA 256 ++ L YP + + D L+ +G +R I +P F + L++ Sbjct: 184 IEKMLEYPFLRLNSGGDKDSFFDKALESMGLQRRIQYEVPFFSAAFQALEGSSLLMI--L 241 Query: 257 PRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWLRETIKNLYA 316 P + N L PL LP E + + + + WH+ + +P WLR+ I + Sbjct: 242 PHHIAM-NALEHFPLAVAQLPLAEVPKNQ----YHMCWHEVHDQDPAHSWLRQLIAEVLR 296 >UniRef50_Q081K6 Transcriptional regulator, LysR family n=2 Tax=Alteromonadales RepID=Q081K6_SHEFN Length = 326 Score = 221 bits (564), Expect = 2e-56, Method: Composition-based stats. Identities = 76/317 (23%), Positives = 130/317 (41%), Gaps = 26/317 (8%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 K+I LDLNLL + L E+++T A+K + +TPSAVS ++ +LR +DPLFV L + Sbjct: 23 KAIQQLDLNLLKIFEALYSEQNMTLASKSLFITPSAVSHAIKRLRLVLNDPLFVRQGLQM 82 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTP--RGLKFELAAESPLMMIMLNALSKQIY 120 PT M L + +L + P F++A L ++ L KQ+ Sbjct: 83 QPTAACQRMAPQLISALNRIRQVLQQCGEFDPLTTEQTFKIAIHEALESQIMPTLIKQVV 142 Query: 121 QRYPQATIKLRNWDYDSLD-AITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 + P A I + +++ + GEVD+ ++ ++ + ++ L SD Sbjct: 143 KLIPHAKIASMSLSRENIARQLANGEVDLAI----------DVARAVNAPLAHKTLLSDP 192 Query: 180 PCVWLRKD----HPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSL 235 CV + + H + H+++ D +LQ+ G R I Sbjct: 193 FCVLIDRRQHAMHLEPSTKLTPTDYANAEHVAVSSRPIGRVMEDILLQQQGVNRHIKYRC 252 Query: 236 PEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWH 295 ++ + + L+ T PR Q L +PF+ ++ L WH Sbjct: 253 QSYQTAAKIVIGS--PLMLTLPRSIA--EQFIHPDLHVCTMPFELP-----DIDTHLYWH 303 Query: 296 KRNSHNPKIVWLRETIK 312 +P VWLR I+ Sbjct: 304 MNTETDPAFVWLRAQIE 320 >UniRef50_A5CSX6 Putative transcriptional regulator, LysR family n=1 Tax=Clavibacter michiganensis subsp. michiganensis NCPPB 382 RepID=A5CSX6_CLAM3 Length = 306 Score = 221 bits (563), Expect = 3e-56, Method: Composition-based stats. Identities = 70/309 (22%), Positives = 122/309 (39%), Gaps = 19/309 (6%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 + LDLNLL L L+ SVT+AA R+ ++P AVS++L +LR D + V + G+ P Sbjct: 1 MAQLDLNLLRVLDALVATSSVTEAASRLALSPPAVSRALGRLRVSMGDEILVRAGRGMVP 60 Query: 65 TPLMVSMEQNLAEWMQMSNLLLDK-PHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRY 123 TP + + ++ + ++ L + F + L+ ++ AL++++ Sbjct: 61 TPFALRVAASVRALLDEADGLTRAGDDDPSTWNRAFTIRMNESLIPVLAPALTERVVAEA 120 Query: 124 PQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPC-V 182 P ++ + +A+ G +D+ R + P L +D V Sbjct: 121 PGVLLRFVPQESKDAEALRDGTLDLDVGIRMASPPDVLAAP----------LVADRFVAV 170 Query: 183 WLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 + T LD +PH+S +D+ L+ GR R + P + + Sbjct: 171 VGARTALGRKTTLTLDDLAAHPHVSASRRGRARGPVDDALEATGRTRRVVAVAPTYAVAA 230 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 M + + P +PL A LPFD V WH+R +P Sbjct: 231 LMVVGSGS--ICLLPELMTERLIDGGVPLRAHRLPFDLPG-----VQVDQRWHRRADADP 283 Query: 303 KIVWLRETI 311 WLR + Sbjct: 284 ASRWLRRAL 292 >UniRef50_A5F3E5 Transcriptional regulator, LysR family n=29 Tax=Vibrio RepID=A5F3E5_VIBC3 Length = 308 Score = 220 bits (562), Expect = 3e-56, Method: Composition-based stats. Identities = 71/315 (22%), Positives = 135/315 (42%), Gaps = 23/315 (7%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 + DLNLL +M+ SV+KAA ++ +T +AVS++L++LR DPLF+ GL P Sbjct: 4 LRDYDLNLLTVFDSVMKLGSVSKAADKLGMTSAAVSQNLSRLREQVGDPLFIRQGRGLQP 63 Query: 65 TPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQIYQR 122 T ++M +++AE + L+ P +F + + +++L L ++I Sbjct: 64 TQYALNMHKHVAEGLSAIRFGLETDAGFDPATSKREFIIGGQGYFDLVVLPPLLQKISDI 123 Query: 123 YPQATIKLRNWDYDSL---DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 P T+ L++++ D ++ E D+ + L +I + + Sbjct: 124 APHITVNLKSYEDDHFTPSQVLSEREADLFLAA----------LPISHPSIVTTQVAEEA 173 Query: 180 PCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFE 239 V K+HP L T + + F H ++ + + +++ ++ R + Sbjct: 174 LVVVYAKNHPRLGSTLSFEQFFAEKHTALTSRRFGNYLFSSLVDQVLPARRVHYQSESML 233 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 + A+ D LL T R + + L + LP VP + WHK Sbjct: 234 NLMATASVTD-LLCFTPKRLADMWAEKLGLQIQPLPFEI-------RSVPTFMCWHKAKQ 285 Query: 300 HNPKIVWLRETIKNL 314 + ++WLRE I+ + Sbjct: 286 QDKGLIWLREQIEAI 300 >UniRef50_A4XRF8 Transcriptional regulator, LysR family n=2 Tax=Pseudomonas RepID=A4XRF8_PSEMY Length = 320 Score = 220 bits (562), Expect = 4e-56, Method: Composition-based stats. Identities = 71/320 (22%), Positives = 127/320 (39%), Gaps = 26/320 (8%) Query: 2 KKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLG 61 + + D+NLL+ + +M E++V++ +++ + AVS +L +LR FDDPLF+ + Sbjct: 4 RNDLRRADINLLVVFETMMHEQNVSRVGEKLFLGQPAVSAALGRLRHLFDDPLFIRTGRV 63 Query: 62 LSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTP--RGLKFELAAESPLMMIMLNALSKQI 119 + PT + NL + L K P F + + +L L + + Sbjct: 64 MEPTSRAQEIFSNLTPALDSIAAALGKCQTFDPTTSEATFHIGLSDDVEYALLPTLLRHL 123 Query: 120 YQRYPQATIKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSD 178 P + +R D L + GE+ +G S LP + L S Sbjct: 124 RVDAPNIRLVVRRADQWQLPQLLASGEISLGISHAL----------QLPANARSKHLRSI 173 Query: 179 VPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEF 238 P + LR D + L+ F R PH + + D L LGR+R + +++P+F Sbjct: 174 RP-MLLRAD--SQAGALTLEEFCRRPHAVVSSMGNVIENADRALHSLGRQRKVVLAVPQF 230 Query: 239 EQSLFMAAQPDNLLLATAPRY-CQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKR 297 + ++A P Y Q + L A+P+ + + +++W Sbjct: 231 SALPMLLEGSS--MIAIVPEYVAQAMSGSGGLRAEAVPVVLPQQE-------LSMVWRGA 281 Query: 298 NSHNPKIVWLRETIKNLYAS 317 +P WLR L + Sbjct: 282 AHSDPGERWLRSRCSALLGA 301 >UniRef50_A1UYG7 Transcriptional regulator, LysR family n=45 Tax=Burkholderia RepID=A1UYG7_BURMS Length = 439 Score = 220 bits (562), Expect = 4e-56, Method: Composition-based stats. Identities = 70/315 (22%), Positives = 116/315 (36%), Gaps = 22/315 (6%) Query: 6 TTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPT 65 LDLNL L + + ++ AA+ +++T AV+ +L +LRA F DPLFV + PT Sbjct: 136 HRLDLNLFRVLDAVYVQGGISAAARALHLTQPAVTHALNRLRAHFGDPLFVRQGNKVVPT 195 Query: 66 PLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGL--KFELAAESPLMMIMLNALSKQIYQRY 123 + ++ ++ +P L F + L I L L + + + Sbjct: 196 ERTREVIADVQRHLKGLQDAARAQTRFSPGALDMSFVVGVRDVLESIALPQLVETLAREA 255 Query: 124 PQATIKLRNWD-YDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCV 182 P + R D + G +D+ R I E + D V Sbjct: 256 PGVRLVSRRVPVADIGRELGSGNLDLAIERRVPAG----------PRIVAEHVADDTLVV 305 Query: 183 WLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 +R+DH + H+++ LD +L GR R I + + + Sbjct: 306 AMRRDHALAGAPLRRADYFAAGHVTVSPLGEPHT-LDVLLGADGRFRRIQLVCQHYFAAC 364 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 + A D LLL Y +L LPL A PLP + P WH+ + Sbjct: 365 QIVASGD-LLLTLPRSYALRMTRL--LPLAAQPLPL-----RLKPYPILAYWHESRELDR 416 Query: 303 KIVWLRETIKNLYAS 317 W R+ + + + Sbjct: 417 AHQWFRQRVIEVVRA 431 >UniRef50_B6R352 Transcriptional regulator, LysR family n=1 Tax=Pseudovibrio sp. JE062 RepID=B6R352_9RHOB Length = 303 Score = 220 bits (562), Expect = 4e-56, Method: Composition-based stats. Identities = 75/314 (23%), Positives = 133/314 (42%), Gaps = 23/314 (7%) Query: 2 KKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLG 61 K + +LD L+ L+L+ + SVT+AA+ + V S VS L ++R DPLFV + Sbjct: 3 KMNYLSLDGRALMMLKLIHETGSVTQAAQMMGVNQSTVSHGLERVRGLLGDPLFVKAGRN 62 Query: 62 LSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGL--KFELAAESPLMMIMLNALSKQI 119 + PT M ++ + E +Q L+ +P P +F + +++ ++ +++ Sbjct: 63 VVPTERMDALMPMVEELLQTL-ALIGEPSSFDPSTATNRFVIDCRDEDHNLLIPSVIRRL 121 Query: 120 YQRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 + P T++ R + ++ GE D+ F+ P S E ++ + LF D Sbjct: 122 RKEAPNVTLRCRLSHRHEVASLVDGEADLLFTPLPP-PDSHEFVA--------QTLFDDE 172 Query: 180 PCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFE 239 V+ D L+ ++ PH ++ + +D L ELG +R S P F Sbjct: 173 FVVFY--DPITRDAPDTLEKYVAAPHANMLVTADEVTFIDRALAELGHKRQTVYSAPSFN 230 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 D L+AT PR L P+P ++V +WH RN Sbjct: 231 ALAATLPGTD--LIATMPRKLICGGIKSGLASCNCPVPV-------VDVGINAIWHIRNR 281 Query: 300 HNPKIVWLRETIKN 313 +P W R+ + + Sbjct: 282 TSPAHKWFRDLVVS 295 >UniRef50_A8FU12 Transcriptional regulator n=2 Tax=Gammaproteobacteria RepID=A8FU12_SHESH Length = 304 Score = 220 bits (562), Expect = 4e-56, Method: Composition-based stats. Identities = 74/317 (23%), Positives = 136/317 (42%), Gaps = 23/317 (7%) Query: 2 KKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLG 61 + ++ +DLNLL L+ L++ER V +AA+++NV+ SA+S +LA+LR FDD LF+ + G Sbjct: 3 ENNLAKVDLNLLKSLRALIEERHVGRAAQKMNVSQSAMSHTLARLRGVFDDSLFIRNAKG 62 Query: 62 LSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPR-GLKFELAAESPLMMIMLNALSKQIY 120 L PT + + L ++ + LL + F + ++ L+ K+I Sbjct: 63 LEPTARAIELSDKLRFILREIDSLLAPKTLELSHIHAHFRIQTHDFILASYLSKAFKRIN 122 Query: 121 QRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 P I ++ D + D + GE+++ + L + Sbjct: 123 HEAPNILIDIKILDETAYDKLDDGELEMIIGAGLQAK----------PRFMQKRLTDENL 172 Query: 181 CVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGR-ERTIAMSLPEFE 239 L K +P L W +T RYPHI + + +G +R I Sbjct: 173 VCLLDKGNPVLKN-WTPETIFRYPHIKSSLLDDRDDPVSKYGKAMGLPKRKIGFLAETLN 231 Query: 240 QSLFMAAQPDNLLLATAP-RYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRN 298 L + D+ L+A P + +Q++ L + P P + +WH+R+ Sbjct: 232 FQLPLL--SDSDLIAFLPDSIAKKGSQVYGLVVKECPFPLP-------PLTIRAMWHERH 282 Query: 299 SHNPKIVWLRETIKNLY 315 ++ W+RE I++++ Sbjct: 283 QNDVVHQWIREKIEDVF 299 >UniRef50_A0KG94 Transcriptional regulator, LysR family n=5 Tax=Gammaproteobacteria RepID=A0KG94_AERHH Length = 318 Score = 220 bits (562), Expect = 4e-56, Method: Composition-based stats. Identities = 74/318 (23%), Positives = 137/318 (43%), Gaps = 33/318 (10%) Query: 15 CLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSMEQN 74 LM + SVT+AA+ + ++ A+S +L +LR +F DPL V +P G+ PTP + Sbjct: 14 AFDALMAQGSVTRAAETLFISQPAMSHALNRLRTFFGDPLLVRTPQGMLPTPRAQRLHLG 73 Query: 75 LAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQIYQRYPQATIKLRN 132 + + +++ L P +F L + +++ L +++ + P TI++R Sbjct: 74 VQQALRLLEQQLSDEEVFEPSQSKRRFVLCTTDYVECVLIPPLIQRLKRLAPAVTIEIRI 133 Query: 133 WDYDSLDA-ITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHP-- 189 +A + GE+D+ E +P + E ++ +R D P Sbjct: 134 LRDTLPEAELASGEIDLVLGFDEYM--------QVPGYLGKETWLTEPLAGLVRADLPMA 185 Query: 190 ------------ALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPE 237 L + +L + PH+ + +LD L+ LG RTI+++ Sbjct: 186 APALAESGDEPAILAERISLAQLIEMPHVFHSPLGTSEASLDRYLKTLGFSRTISVNSQS 245 Query: 238 FEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKR 297 + + + +Q D+LL+ P H PL +LPLP D + +WH Sbjct: 246 YMSAAAIVSQSDHLLV--LPSMVAELLASH-WPLKSLPLPEDVP-----DYHLNCVWHPV 297 Query: 298 NSHNPKIVWLRETIKNLY 315 ++ P +VWL++ +K L Sbjct: 298 HAQQPALVWLKDLMKELV 315 >UniRef50_A6V5Q0 MexT protein n=1 Tax=Pseudomonas aeruginosa PA7 RepID=A6V5Q0_PSEA7 Length = 308 Score = 220 bits (561), Expect = 5e-56, Method: Composition-based stats. Identities = 67/325 (20%), Positives = 124/325 (38%), Gaps = 31/325 (9%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 ++I +DLNLLL LM ERS T+AA ++VT AVS +L +LR F D LF+ S G+ Sbjct: 7 RNIARIDLNLLLTFHCLMSERSATRAAVVLHVTQGAVSAALRRLREHFGDELFIRSASGM 66 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGLK--FELAAESPLMMIMLNALSKQIY 120 PT + + +AE + + +L +P F +A + + + Sbjct: 67 QPTRKAMELAPRIAEALTSISGVLAAEPEFSPHDSSYVFNIALSDDIESYLAPCIVNAAA 126 Query: 121 QRYPQATIKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 + + ++ ++D+ + +VLFS Sbjct: 127 AEGLGVSFAFHQSNSSLWKQSLLDPDMDLVICSEPK---------DFNTSYSSQVLFSSS 177 Query: 180 PCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFE 239 R LD + H+ I ++ +D++ + G R + S F Sbjct: 178 YSCLFRPRGSMAGAAIGLDDYFAANHVRISYDGR-RGFIDDLFESAGYARRVTASFTHFA 236 Query: 240 QSLFMAAQPDNLLLATAPRY-CQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLW---- 294 +L + ++AT P + + Y+++ L +PLP + ++W Sbjct: 237 GALSTLMSGE--VIATLPTFAAETYSRMMDLHCCPVPLPVPSFRC-------FMVWDVAK 287 Query: 295 HKRNSHNPKIVWLRETIKNLYASMA 319 H + H+ WLR + + + Sbjct: 288 HNKTHHD----WLRRFVGEIAQRLG 308 >UniRef50_C3MFM7 Putative transcriptional regulator, LysR family n=1 Tax=Rhizobium sp. NGR234 RepID=C3MFM7_RHISN Length = 409 Score = 220 bits (560), Expect = 7e-56, Method: Composition-based stats. Identities = 80/322 (24%), Positives = 139/322 (43%), Gaps = 30/322 (9%) Query: 4 SITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLS 63 ++ DLNLL L++ERSVT+A +I ++ AVS +L +LR DD LF+ + Sbjct: 44 NLNAFDLNLLRVFDALIRERSVTRAGDQIGLSQPAVSSALRRLRDLLDDQLFIRRGNDMI 103 Query: 64 PTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQIYQ 121 PTP + + + + + L L K H P +F L ++ ++ALS+ + Sbjct: 104 PTPRALELGSPVRDALGKIELALHKRRHFDPATIQRRFTLLGSDIFSVMAMSALSRCCAE 163 Query: 122 RYPQATIKLRNWDYDSLDAITRGE-VDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 P ++ L + + + + + + VDI + P + +SS+P L + Sbjct: 164 EAPGISLHLVDSALGNAERLLQEDAVDIALETELNVP---DWVSSMP-------LLAAPY 213 Query: 181 CVWLRKDHP-------ALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAM 233 V HP A + LD F R H++ +D L ++GR+R +A+ Sbjct: 214 VVVASARHPGITAAGVAAREAIPLDLFCRLHHVARSSAGVVNCVVDAELAKVGRKRHVAL 273 Query: 234 SLPEFEQSLFMAAQPDNLLLATAPR-YCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTL 292 ++P A ++L LAT PR + + L + P+P + + Sbjct: 274 TMPH--TLGVAVATANSLHLATVPRQFAELMASHLGLKIYEAPVPLPATN-------INV 324 Query: 293 LWHKRNSHNPKIVWLRETIKNL 314 WH R+ +P WLR I + Sbjct: 325 FWHSRHDGDPAHQWLRRQIVRV 346 >UniRef50_A3YI62 Transcriptional regulator, LysR family protein n=2 Tax=Oceanospirillaceae RepID=A3YI62_9GAMM Length = 305 Score = 219 bits (559), Expect = 8e-56, Method: Composition-based stats. Identities = 59/318 (18%), Positives = 127/318 (39%), Gaps = 20/318 (6%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 + DLNLL+ + L+ E V++AA+++ ++ SA+S +L +LR DDPL V + GL+P Sbjct: 4 LRQFDLNLLIIFEALISECHVSRAAEKVFLSQSAMSHALNRLRTQLDDPLLVKTENGLTP 63 Query: 65 TPLMVSMEQNLAEWMQMSNLLLDKPHHQTP--RGLKFELAAESPLMMIMLNALSKQIYQR 122 TP ++M ++ + + + + F +A+ ++ Q+ Sbjct: 64 TPRALAMLPDVRQALNLVERTISPAESFQASLSDRTFRIASTDYFETVVFPEWFSQLQLS 123 Query: 123 YPQATIKLRNWDYDS-LDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPC 181 P +++ +S L + +GE+D+ + LP + + ++ Sbjct: 124 APNVRVEIDLISEESALLRLEKGEIDLIVGMDKE--------QKLPSHLIVQDWLTEKQV 175 Query: 182 VWLRKDHPALHQTWNLDTFLRYPHIS-ICWEQSDTWALDNVLQELGRERTIAMSLPEFEQ 240 + + +L+ +L PHI E +D L R S + Sbjct: 176 CLASIQNQNARGSLSLEAYLALPHIRFFDLEGKTDSNVDRWLASQTLARNHIASTTNYMA 235 Query: 241 SLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 + + A + ++ + + Q+ + +V P + TL+ H + Sbjct: 236 AARIVANTEA-IITLPYHMAKLFTQMMPVSIVTPPDGLPA-------IDMTLVQHPLYAK 287 Query: 301 NPKIVWLRETIKNLYASM 318 + I+WL++ + S+ Sbjct: 288 DSGIIWLKQVLCEHVKSL 305 >UniRef50_C5A8T0 Transcriptional regulator, LysR family protein n=2 Tax=Proteobacteria RepID=C5A8T0_BURGB Length = 313 Score = 219 bits (558), Expect = 1e-55, Method: Composition-based stats. Identities = 76/321 (23%), Positives = 123/321 (38%), Gaps = 24/321 (7%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 +I +DLNLL ++L E ++AA R+++T SAVS +L +LRA + DPLFV + GL Sbjct: 4 MNIADVDLNLLKVFEVLFDEGGASRAAIRLDLTQSAVSAALRRLRALYGDPLFVRTGRGL 63 Query: 63 SPTPLMVSMEQNLAEWMQMSN--LLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIY 120 +PT ++ + E + L P + G +A + L + Sbjct: 64 APTARARELKPLIGEALDRCRQSLAFGAPAPASFEGRAVSVAMSDDFEIAFGGRLIECAA 123 Query: 121 QRYPQATIKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 + P + R + DA+ EVD+ + R + + L Sbjct: 124 RLAPGLRVIFRQTHSQIVGDALANREVDLAIAAGGFATR----------GLGHMALGHGR 173 Query: 180 PCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFE 239 + LD FL H+ + +D L E+GR RT+ S F Sbjct: 174 YACLVDPAAAPGRLVLTLDDFLAREHVLVSSGG-VVGIVDEALAEIGRRRTVRASTTHFA 232 Query: 240 QSLFMAAQPDNLLLATAPRY-CQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRN 298 F+ +AT P + + ++ L LVA PL P L W Sbjct: 233 ALPFLLRGT--PAVATIPHHAAEALARMTGLGLVACPLAMPA-------YPVALGWRVST 283 Query: 299 SHNPKIVWLRETIKNLYASMA 319 + + LR+ I + +A A Sbjct: 284 LRDAAVAKLRQAIVDSFAGFA 304 >UniRef50_B9Z947 Transcriptional regulator, LysR family n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z947_9NEIS Length = 330 Score = 218 bits (557), Expect = 1e-55, Method: Composition-based stats. Identities = 74/318 (23%), Positives = 125/318 (39%), Gaps = 21/318 (6%) Query: 2 KKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLG 61 ++ LDLNLL+ LMQER V++AA R+ + A+S +LA+LR DDPLFV S Sbjct: 8 HDALRRLDLNLLVAFDALMQERHVSRAAARLFLGQPAMSHALARLRQLLDDPLFVRSGSR 67 Query: 62 LSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQI 119 + PTP + + W++ + L + P F LAA + ++ AL + Sbjct: 68 MEPTPRACELAPQVRAWLEQAQQFLFRADAFDPAAAHATFRLAAPDGMEALLYPALIATL 127 Query: 120 YQRYPQATIKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSD 178 + P ++ + + D L A+ EVD+ + R LF Sbjct: 128 RRDAPGVRLRSQLLETDQQLAALDHDEVDLLITAAPLALRDW---------HSRLRLFKS 178 Query: 179 VPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEF 238 + L + L H+ + + +D++ G ER + + Sbjct: 179 DFISVHSRRQLPLPEPATLADLASCDHVVSSYRGTAAGVVDHLFAAHGLERRVQVLSASL 238 Query: 239 EQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRN 298 + AQ L++ P + L PLP + + L+WH+RN Sbjct: 239 LAIGHIVAQ--APLMSIQPAIYRGL-FSTTPELACAPLP------GEARITVGLVWHRRN 289 Query: 299 SHNPKIVWLRETIKNLYA 316 +P +LR+T+ Sbjct: 290 DRHPLHRYLRDTVIAAMR 307 >UniRef50_Q15XK7 Transcriptional regulator, LysR family n=1 Tax=Pseudoalteromonas atlantica T6c RepID=Q15XK7_PSEA6 Length = 302 Score = 218 bits (557), Expect = 1e-55, Method: Composition-based stats. Identities = 64/315 (20%), Positives = 139/315 (44%), Gaps = 21/315 (6%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 LDLNLL+ L +L++E+++T++A+R++++ SA S L++LRA+F+D L V + P Sbjct: 3 FEQLDLNLLVALDILIEEQNITRSAERLHLSQSATSGILSRLRAFFEDDLLVQIGKKMQP 62 Query: 65 TPLMVSMEQNLAEWMQMSNLLL--DKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQR 122 TP + ++ +A + + K ++ F++ A ++ ++L+ + ++ + Sbjct: 63 TPFALELQGPVAGVLATVRGSIIGKKANNPEHSERHFKIIASDYVIQVLLSHVVAEVAKL 122 Query: 123 YPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCV 182 P+ T + ++ +++G D+ + + S L SD Sbjct: 123 APKVTFEFLTPFAHEMNILSKGGADMMVAPEAIILSNYSSAS----------LISDELVC 172 Query: 183 WLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVL-QELGRERTIAMSLPEFEQS 241 ++ + + F H+S+ + + +++ L L R IA+ +F Sbjct: 173 IADINNTEVGDELTFEQFNAMGHVSVGFARVSLLSIEQWLINTLETNRKIAVITSDFSTM 232 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 ++ + +A PR+ + + + + LPF K+ +L+WH ++ Sbjct: 233 VYALLNTNR--IAILPRHFVDMHIQRE-AVKTVKLPFSPPNLKE-----SLMWHPTLDND 284 Query: 302 PKIVWLRETIKNLYA 316 P WLRE I Sbjct: 285 PMHRWLREKIIECAG 299 >UniRef50_A6GE91 Probable transcription regulator protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GE91_9DELT Length = 305 Score = 218 bits (557), Expect = 2e-55, Method: Composition-based stats. Identities = 69/318 (21%), Positives = 125/318 (39%), Gaps = 23/318 (7%) Query: 4 SITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLS 63 I LDLNLL L+ L+ RSV++AA+ I V+ A+S +L +LRA D L + + Sbjct: 3 DIDALDLNLLKSLRALLDTRSVSRAAEAIGVSQPAMSAALRRLRAALGDELLLRQGHQMI 62 Query: 64 PTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQIYQ 121 PT S+ + L + + + L + + ++ ++ L + + Sbjct: 63 PTAYAESLVEPLTDALGQLEVALFQRAGFDASSWATTLFILTTDDVIEVLGGPLHDALAE 122 Query: 122 RYPQATIKLRNWDYDSLD-AITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 P T+ R D + RG+ + + + P + L+ D Sbjct: 123 LAPGVTLAFRTLTSDYGKGQLQRGDAHLAITVDWTA----------PPELKRVRLYDDRF 172 Query: 181 CVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQ 240 +R DH + + F R H+ + +D+ L + G R I +P F Sbjct: 173 VSLVRADHRFARRRPSRAAFARAEHLLVAPLGGTWGPVDDALADDGLGRAIRAVVPTFSS 232 Query: 241 SLFMAAQPDNLLLATAPR-YCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 + + + L+ T PR + + +H L L P+ + + L WH R Sbjct: 233 APGYLVRSE--LVCTLPRHFARAVAGVHGLKLFETPVAL-------APLRYDLFWHPRFD 283 Query: 300 HNPKIVWLRETIKNLYAS 317 +P VWLR ++ + + Sbjct: 284 RDPGHVWLRGLLREVADA 301 >UniRef50_Q9RBI3 SalR n=2 Tax=Acinetobacter RepID=Q9RBI3_ACIAD Length = 296 Score = 218 bits (556), Expect = 2e-55, Method: Composition-based stats. Identities = 64/314 (20%), Positives = 138/314 (43%), Gaps = 21/314 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +DL+L+ + + ++++KAA+ +N++ +V+ +L +LR ++PLF + G+ T L Sbjct: 1 MDLSLIRIFICVYENKNISKAAEILNLSQPSVTYNLNRLRKHLNNPLFERTQYGVEATKL 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTP--RGLKFELAAESPLMMIMLNALSKQIYQRYPQ 125 + E + + +D+ + P F + + +L L + + P+ Sbjct: 61 SHELYPVFKESILKIEIAVDEALNFNPLTSNKTFRIGLSDIGEICLLPTLIEYLRAHAPK 120 Query: 126 ATIKLRNWDYDSLDA-ITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 I++ D ++ + G +D+ +H + L +YE LF + + Sbjct: 121 IKIEVEEIKIDQVEKWLIEGFIDVAV-FNSTHLEFKHL--------EYETLFLERYVALV 171 Query: 185 RKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 +HP + T + D +L H++I + +D+VL+ +G +R IA+ +P F + Sbjct: 172 NMNHPRIRSTLSFDAYLNESHVAIKSS-TGHTQVDHVLKLMGHQRKIALEVPHFGVLQGV 230 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 + D L++ R Q Y + ++ LP + E L W + + Sbjct: 231 LDKTD-LMVTLPSRAAQQYLNQSHVRVLELPF-------QMSEFYVGLHWFAQTNEPLAR 282 Query: 305 VWLRETIKNLYASM 318 +WL +T K + + + Sbjct: 283 IWLIQTCKKVISVL 296 >UniRef50_A5V6I2 Transcriptional regulator, LysR family n=1 Tax=Sphingomonas wittichii RW1 RepID=A5V6I2_SPHWW Length = 301 Score = 218 bits (555), Expect = 2e-55, Method: Composition-based stats. Identities = 67/317 (21%), Positives = 127/317 (40%), Gaps = 21/317 (6%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 LDLNLL+ L + RSV+ AA+ ++++ SA+S +LA+LRA+FDD L V L Sbjct: 3 FQGLDLNLLVAFDTLAEHRSVSLAAEAMHLSQSAMSAALARLRAYFDDELLVPRGRTLVL 62 Query: 65 TPLMVSMEQNLAEWMQMSNLLLDKPHHQTP--RGLKFELAAESPLMMIMLNALSKQIYQR 122 TP + + + + + + P P +F + A + ++L ++ Sbjct: 63 TPRAEQLAPEVRDTLLRIHATIAHPAAFDPIETKREFTIVASDYVQAVLLEPFMRKAAHH 122 Query: 123 YPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCV 182 P ++ +D RG +D+ S + + LF D + Sbjct: 123 APGMRFRILPISQQGIDEFKRGVIDLIIVAD----------SVILPEHPSQKLFEDEAKL 172 Query: 183 WLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWAL-DNVLQELGRERTIAMSLPEFEQS 241 DHP + +++ F H++ +L D +L E R I + +P F Sbjct: 173 ICSADHPTIGDEISMEQFGTVGHVTTSLHHHRPGSLFDLMLLERSIARRIEIQVPAFSMM 232 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 + + + A R Y ++ + L++LP ++ + WH + Sbjct: 233 AGAVVGTERVAILHA-RLATSYARILPIKLLSLPFALPPIRE-------VIQWHALRQRD 284 Query: 302 PKIVWLRETIKNLYASM 318 + WL E + + A++ Sbjct: 285 RGLQWLLEALTSEAAAL 301 >UniRef50_A6ARN3 Transcriptional regulator, LysR family n=4 Tax=Vibrio RepID=A6ARN3_VIBHA Length = 305 Score = 218 bits (555), Expect = 3e-55, Method: Composition-based stats. Identities = 70/323 (21%), Positives = 121/323 (37%), Gaps = 25/323 (7%) Query: 1 MKKSI--TTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNS 58 MK I +DLNLL+ L + RSV+ AA++ V+ SA+S SL++LR FDDPLF Sbjct: 1 MKDDIQWRNIDLNLLVTFSYLYRYRSVSLAAEKSFVSQSAMSHSLSRLRVLFDDPLFERK 60 Query: 59 PLGLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKF--ELAAESPLMMIMLNALS 116 ++PT + + + L P + I L Sbjct: 61 GHKMAPTEHAHYIAPTVHHLLDSIAKDLLTKSAFLPENYAGVCRIGLTDYAEFIFAPLLY 120 Query: 117 KQIYQRYPQATIKLRNWDYDSLDAI-TRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVL 175 +I +R P+A I N + + AI ++D+ + L + + L Sbjct: 121 DEIRKRAPEAQISFINVNRSNYVAITEHDKLDVIIGS----------MPVLDDNFESQYL 170 Query: 176 FSDVPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSL 235 +++ K ++ F + + S + +D L E G R + ++ Sbjct: 171 YTEKHVCLCDKRVLKGETQLSIHAFANIEQALVSPDGSLSTQVDKKLAEHGLSRKVTVAS 230 Query: 236 PEFEQSLFMAAQPDNLLLATAP-RYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLW 294 F + Q + L+A P + Q L V P+ + +LW Sbjct: 231 RNFLTIRNLLKQRE--LVAIVPEKMAQAEGFSDDLVSVQPPIAV-------ADFDIAMLW 281 Query: 295 HKRNSHNPKIVWLRETIKNLYAS 317 H ++ K +WLR+ + L Sbjct: 282 HTSRNNEDKGIWLRQLVAELITG 304 >UniRef50_A4XED3 Transcriptional regulator, LysR family n=1 Tax=Novosphingobium aromaticivorans DSM 12444 RepID=A4XED3_NOVAD Length = 333 Score = 217 bits (554), Expect = 3e-55, Method: Composition-based stats. Identities = 59/316 (18%), Positives = 124/316 (39%), Gaps = 22/316 (6%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 LDLNLL+ L L+ ERSV+ AA R+ ++ SA S +L +LR +F D L V + Sbjct: 3 FGRLDLNLLVALDALLTERSVSLAADRLCLSQSATSSALGRLREYFGDELLVVKGRNMIL 62 Query: 65 TPLMVSMEQNLAEWMQMSNL--LLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQR 122 T + + + ++ + P + A ++L + + Sbjct: 63 TARAEELIEPVRAVLEQIRTTVAVAPPFDPATTDRVIRIMASDYSTEVLLTDALATMERC 122 Query: 123 YPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCV 182 P +++ ++AI RG +D+ + + + ++LF D V Sbjct: 123 APSMRFEIQPMHDAPIEAIERGYIDLLLTIDYA----------ISSDHPSQILFEDDYVV 172 Query: 183 WLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVL-QELGRERTIAMSLPEFEQS 241 D+PA+ + + H+S + ++ A ++ + ++R + + P F Sbjct: 173 VGAADNPAMAEPMTRQLYFELGHVSARFGKARVPAFEDWFVRRQKQQRRVEVVAPSFLSL 232 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 + R + ++ ++ + +PL E + L W+ N+++ Sbjct: 233 PGLVVGT--------RRIATMHRRMAEIVVRNMPLVIREIPFDIPPIREALQWNIANNND 284 Query: 302 PKIVWLRETIKNLYAS 317 + W+ E + L A+ Sbjct: 285 RALRWVVEQL-ELAAT 299 >UniRef50_Q3S4D5 LysR-like regular protein n=1 Tax=Polaromonas naphthalenivorans CJ2 RepID=Q3S4D5_POLNA Length = 301 Score = 217 bits (554), Expect = 3e-55, Method: Composition-based stats. Identities = 56/247 (22%), Positives = 97/247 (39%), Gaps = 13/247 (5%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 + +DLNLL+ L+ +RSV+ +A+++ +T AVS +L +LRA D LF+ + G+ Sbjct: 1 MDLREIDLNLLVVFNQLLLDRSVSTSAEKLGLTQPAVSNALKRLRAVLKDELFLRTSRGM 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTP--RGLKFELAAESPLMMIMLNALSKQIY 120 PTP + + + + + + P F LA M + L + Sbjct: 61 EPTPYALHLAEPVIYALNALQTAFTTRNSFDPLASTRTFNLAMTDIGEMYFVPPLMNALS 120 Query: 121 QRYPQATIKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 + P I + +L + + G VD+ LL +L LF Sbjct: 121 EAAPHVRISTVRPNAGNLKEDMESGTVDLALG----------LLPNLQTGFFQRRLFLHK 170 Query: 180 PCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFE 239 RK HP L F H+ I + +D +L G +R + + +P F Sbjct: 171 YVCMFRKGHPLAKSPMTLKQFTELDHVGILAANTGHGEVDGLLDRAGIKRKMRLVVPHFI 230 Query: 240 QSLFMAA 246 + + Sbjct: 231 AVGHITS 237 >UniRef50_D0XU87 Transcriptional regulator, LysR family n=1 Tax=Caulobacter segnis ATCC 21756 RepID=D0XU87_9CAUL Length = 305 Score = 217 bits (554), Expect = 3e-55, Method: Composition-based stats. Identities = 71/303 (23%), Positives = 126/303 (41%), Gaps = 25/303 (8%) Query: 21 QERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFV--NSPLGLSPTPLMVSMEQNLAEW 78 Q+R++T AA R+ ++ A+S L +LRA D LFV S G+ PTP ++ +A+ Sbjct: 20 QDRNITHAAGRLGISQPALSARLTRLRALLGDRLFVPAPSGRGVVPTPRAEALTPLIADV 79 Query: 79 MQMSNLLLDK-PHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQATIKLRNWDYDS 137 ++ +++ T F LA + +++ L++++ P ++L D Sbjct: 80 LRGIAAVMEPGTFDPTSSNRVFTLALQENPAIMLGPGLARRVRAAAPGLRLRLAVPDRKQ 139 Query: 138 LDA-ITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPALHQTWN 196 + A + G+VDI G + LF D RKDHP + Sbjct: 140 IPALLESGDVDIFVGGA----------TDADNGWIGRSLFDDDFATAQRKDHPRGTGPMD 189 Query: 197 LDTFLRYPHISICWEQS-DTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQPDNLLLAT 255 L+ F + H+ + +D L+ +GR R +AMS+ + + + A D LL Sbjct: 190 LEAFCDHAHLLVSSAGDPFAGVIDKALEAIGRRRFVAMSVQSYAVAPTIIAGSD-LLCTL 248 Query: 256 APRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWLRETIKNLY 315 R + ++ L L P+ V + WH R+ + WLRE + Sbjct: 249 PTRMLRRFD--AALDLFTPPVSL-------KAVAISAYWHPRHQEDLGHRWLREQLFAAA 299 Query: 316 ASM 318 ++ Sbjct: 300 GAV 302 >UniRef50_B5ZWA1 Transcriptional regulator, LysR family n=4 Tax=Rhizobium RepID=B5ZWA1_RHILW Length = 311 Score = 217 bits (554), Expect = 3e-55, Method: Composition-based stats. Identities = 67/320 (20%), Positives = 130/320 (40%), Gaps = 23/320 (7%) Query: 2 KKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLG 61 ++ + DLNLL+ LM+ERSVTKAA R+ + A+S +L LR D LFV Sbjct: 9 HFNLWSFDLNLLVAFDALMKERSVTKAAVRLKIQQPAMSHNLGTLRTLLQDELFVRVGQV 68 Query: 62 LSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGLK--FELAAESPLMMIMLNALSKQI 119 + PT + + + + + L + P P + F + S L ++++ L+ + Sbjct: 69 MQPTHRALRFAEAVEHILSRTQLAIVTPATFEPGEAEQIFRIGFSSELEVLLVPRLAAML 128 Query: 120 YQRYPQATIKLRNWDYDSLD-AITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSD 178 + P + R + + + + +D+G + +LF Sbjct: 129 NEMAPGIRVLARAVNPELVHKLLDDNVIDLGVGCYDDGNNR----------HRRSLLFEQ 178 Query: 179 VPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEF 238 L +T + D ++ H + + + +D+ L+ + ++++ PEF Sbjct: 179 SLMCCYNPKLLDLPETLDRDAYIGLKHALVSQKDAIEGCIDDALKRINVRLDVSVAAPEF 238 Query: 239 EQSLFMAAQPDNLLLATAP-RYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKR 297 L + L+AT P R + Y L L + +PL S P +++W Sbjct: 239 LTVLTAVLE--APLIATLPTRIVKRYAGLFGLAMAEVPLDLKVS-------PISMVWSAA 289 Query: 298 NSHNPKIVWLRETIKNLYAS 317 ++P W+R + L ++ Sbjct: 290 GDNDPANRWMRSQVTQLVSA 309 >UniRef50_B9J825 Nod transcriptional regulator protein n=1 Tax=Agrobacterium radiobacter K84 RepID=B9J825_AGRRK Length = 333 Score = 217 bits (554), Expect = 3e-55, Method: Composition-based stats. Identities = 71/317 (22%), Positives = 126/317 (39%), Gaps = 23/317 (7%) Query: 4 SITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLS 63 ++ +DLNLLL +LMQER+V++AA+R+ + +S +L +LR DD LFV GL Sbjct: 8 ALRKIDLNLLLAFSVLMQERNVSRAAERLLLGQPGLSAALRRLRETLDDELFVRVGRGLQ 67 Query: 64 PTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGL--KFELAAESPLMMIMLNALSKQIYQ 121 PT +S+ + + + + P P +F + L L+ ++ Sbjct: 68 PTARALSIAPAIEDALSGIERAIRPPAAFDPSSWQGEFRVGMCDNLESDFFGPLAARLRG 127 Query: 122 RYPQATIKLRNWD-YDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYE-VLFSDV 179 P A + +D ++ + G D S + P + LF+ Sbjct: 128 LAPNARLTGVAFDKREAGRLLDEGAYDFSISVHDE-----------PASWHIRAPLFNQA 176 Query: 180 PCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFE 239 H L L+ F + HI++ E + +D L +G R + ++P + Sbjct: 177 SACIYDPRHIRLDAPLGLEDFAKADHITVSLEGNTLTNVDLALARVGYHRQVVATVPRY- 235 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 +L MA + + + QLH L + PL P T+L+ + + Sbjct: 236 SALPMALRAMPAIATIPESIARCMAQLHNLTVSQPPLDLPAD-------PVTMLYRRVDQ 288 Query: 300 HNPKIVWLRETIKNLYA 316 + + VW R + A Sbjct: 289 ADSRAVWFRRLFVEVVA 305 >UniRef50_A8TNA4 Transcriptional regulator MexT n=1 Tax=alpha proteobacterium BAL199 RepID=A8TNA4_9PROT Length = 299 Score = 217 bits (554), Expect = 4e-55, Method: Composition-based stats. Identities = 73/315 (23%), Positives = 123/315 (39%), Gaps = 24/315 (7%) Query: 7 TLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTP 66 LDLNLL L+M+ERS+T+AA+R++V AVS +LA+LR+ D LFV S + PT Sbjct: 2 NLDLNLLRVFALVMRERSLTRAARRLSVGQPAVSHALARLRSELGDALFVRSGRRMEPTE 61 Query: 67 LMVSMEQNLAEWMQMSNLLLDKPHHQTP--RGLKFELAAESPLMMIMLNALSKQIYQRYP 124 S +A ++ + L P F + L M L +R P Sbjct: 62 WAKSFYAEIAPALERIDASLMSSRAFDPGSTDRTFRIGMSDDLQMAFLPQFLAAFTERMP 121 Query: 125 QATIKLRNWDYDS-LDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVW 183 A + ++ +Y + + + R +V + L +LP A + + Sbjct: 122 NARLVVQQTNYTTAAEMLDRRDVSLVVG----------YLDTLPAAAKTRTISRVSYRMI 171 Query: 184 LRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 + + + L + H + + +D LQ+ G R I +SL F + Sbjct: 172 MDSRN---AEVTTLADYCAGKHALVTFAGDLIGYVDETLQQRGVARDIRLSLSNFAVVPY 228 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 L+ T P+Y ++ LV LPF+ E ++ W +P Sbjct: 229 ALRGTGYLV--TIPQYLAAV-LANETGLVMAQLPFESP-----EFDVSMAWSPTVDSDPG 280 Query: 304 IVWLRETIKNLYASM 318 +R+ I + Sbjct: 281 ERIIRDLIVDTVGGF 295 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_A7ZTR6 HTH-type transcriptional regulator yidZ n=122 Ta... 316 4e-85 UniRef50_B9Z480 Transcriptional regulator, LysR family n=1 Tax=L... 316 9e-85 UniRef50_A6T413 Transcriptional regulator, LysR family n=1 Tax=J... 313 5e-84 UniRef50_A9G5G2 Nodulation protein D n=2 Tax=Proteobacteria RepI... 311 3e-83 UniRef50_C3KKF8 Putative transcriptional regulatory protein, Lys... 308 2e-82 UniRef50_Q2S713 Transcriptional regulator n=1 Tax=Hahella chejue... 304 3e-81 UniRef50_B0C5B7 Transcriptional regulator, LysR-family n=1 Tax=A... 303 4e-81 UniRef50_Q3KA14 LysR family regulatory protein n=24 Tax=Bacteria... 302 1e-80 UniRef50_Q5P743 Transcriptional regulator, LysR family n=2 Tax=B... 301 2e-80 UniRef50_B1KAV0 Transcriptional regulator, LysR family n=5 Tax=B... 301 2e-80 UniRef50_C6XIT5 Transcriptional regulator, LysR family n=1 Tax=H... 300 3e-80 UniRef50_A1W256 Transcriptional regulator, LysR family n=2 Tax=C... 300 6e-80 UniRef50_P10183 HTH-type transcriptional activator nahR n=67 Tax... 297 4e-79 UniRef50_Q2S7V2 Transcriptional regulator n=1 Tax=Hahella chejue... 295 1e-78 UniRef50_Q12H69 Transcriptional regulator, LysR family n=14 Tax=... 295 1e-78 UniRef50_A9GLW1 Transcriptional regulator, LysR family n=1 Tax=S... 294 2e-78 UniRef50_Q473Q1 Transcriptional regulator, LysR family n=9 Tax=B... 294 3e-78 UniRef50_C6ARG9 Transcriptional regulator, LysR family n=7 Tax=P... 293 6e-78 UniRef50_Q15UP0 Transcriptional regulator, LysR family n=4 Tax=A... 293 8e-78 UniRef50_A0LD88 Transcriptional regulator, LysR family n=1 Tax=M... 292 9e-78 UniRef50_B4X4B4 LysR substrate binding domain protein n=1 Tax=Al... 292 1e-77 UniRef50_A8GKS5 Transcriptional regulator, LysR family n=1 Tax=S... 292 1e-77 UniRef50_Q12M05 Transcriptional regulator n=3 Tax=Gammaproteobac... 291 2e-77 UniRef50_A1U1I0 Transcriptional regulator, LysR family n=67 Tax=... 289 9e-77 UniRef50_A3QJ07 Transcriptional regulator, LysR family n=25 Tax=... 289 9e-77 UniRef50_A0LD87 Transcriptional regulator, LysR family n=1 Tax=M... 289 1e-76 UniRef50_A9FW21 Transcriptional regulator, LysR family n=2 Tax=M... 288 2e-76 UniRef50_A6VUW1 Transcriptional regulator, LysR family n=2 Tax=M... 287 3e-76 UniRef50_A9AQZ4 Transcriptional regulator, LysR family n=24 Tax=... 286 5e-76 UniRef50_A5F4D9 Transcriptional regulator, LysR family n=68 Tax=... 286 9e-76 UniRef50_Q0BPL7 Transcriptional regulators, LysR family n=1 Tax=... 286 9e-76 UniRef50_A5V8P8 Transcriptional regulator, LysR family n=1 Tax=S... 286 1e-75 UniRef50_A9FB16 Transcriptional regulator, LysR family n=3 Tax=S... 286 1e-75 UniRef50_B6R1K2 Transcriptional regulator, LysR family n=1 Tax=P... 285 1e-75 UniRef50_Q30XG7 Conserved hypothetical transcriptional regulator... 285 1e-75 UniRef50_A4YPA1 Putative transcriptional regulator, LysR family ... 285 1e-75 UniRef50_Q7W2A6 Transcriptional regulator n=3 Tax=Bordetella Rep... 285 2e-75 UniRef50_B0BQD1 HTH-type transcriptional activator n=15 Tax=Prot... 284 2e-75 UniRef50_Q13YH7 Transcriptional regulator, LysR family n=12 Tax=... 284 2e-75 UniRef50_A1WRT3 Transcriptional regulator, LysR family n=1 Tax=V... 284 2e-75 UniRef50_Q2IYM8 Transcriptional regulator, LysR family n=2 Tax=R... 284 3e-75 UniRef50_B2JSH4 Transcriptional regulator, LysR family n=2 Tax=B... 284 3e-75 UniRef50_D0LKM3 Transcriptional regulator, LysR family n=1 Tax=H... 284 3e-75 UniRef50_Q08NF6 Transcriptional Regulator, LysR family n=1 Tax=S... 284 4e-75 UniRef50_A3Y808 Transcriptional regulator, LysR family protien n... 283 4e-75 UniRef50_B7WQP0 Transcriptional regulator, LysR family n=1 Tax=C... 283 5e-75 UniRef50_C9NXV6 Transcriptional regulator LysR family n=1 Tax=Vi... 283 5e-75 UniRef50_Q8YZV2 Transcriptional regulator n=2 Tax=Nostocaceae Re... 283 6e-75 UniRef50_Q13QG3 Transcriptional regulator, LysR family n=9 Tax=P... 283 6e-75 UniRef50_A6EYC4 LysR family regulatory protein n=1 Tax=Marinobac... 283 8e-75 UniRef50_Q1XGL2 Transcriptional activator NahR n=3 Tax=root RepI... 282 1e-74 UniRef50_C4UEX0 Lys-R type regulatory protein n=1 Tax=Yersinia r... 282 1e-74 UniRef50_Q1GMN1 Transcriptional regulator, LysR family n=1 Tax=R... 281 2e-74 UniRef50_B0C7Y6 Transcriptional regulator, LysR family n=1 Tax=A... 281 2e-74 UniRef50_Q2G901 Transcriptional regulator, LysR family n=2 Tax=A... 281 3e-74 UniRef50_Q89IY7 Transcriptional regulatory protein n=1 Tax=Brady... 281 3e-74 UniRef50_A9CLK9 Transcriptional regulator, LysR family n=2 Tax=A... 280 5e-74 UniRef50_A0KKG7 HTH-type transcriptional regulator YidZ n=3 Tax=... 279 6e-74 UniRef50_Q39AY8 Transcriptional regulator, LysR family n=1 Tax=B... 279 6e-74 UniRef50_Q393U0 Transcriptional regulator, LysR family n=6 Tax=B... 278 1e-73 UniRef50_A8GG55 Transcriptional regulator, LysR family n=1 Tax=S... 278 2e-73 UniRef50_A6FYP7 Transcriptional regulator, LysR family protein n... 278 2e-73 UniRef50_A5W6Q9 Transcriptional regulator, LysR family n=12 Tax=... 278 2e-73 UniRef50_Q46YJ7 Transcriptional regulator, LysR family n=5 Tax=c... 278 3e-73 UniRef50_Q3JR86 LysR-family regultor n=70 Tax=Proteobacteria Rep... 277 3e-73 UniRef50_Q88I06 Nodulation protein d1 n=4 Tax=Gammaproteobacteri... 277 4e-73 UniRef50_C4KB22 Transcriptional regulator, LysR family n=37 Tax=... 277 5e-73 UniRef50_A8V9B9 LysR-like regulatory protein n=2 Tax=Betaproteob... 276 5e-73 UniRef50_C5AL93 Transcriptional regulator, LysR family protein n... 276 8e-73 UniRef50_B8KV86 Putative transcriptional regulator, LysR family ... 276 1e-72 UniRef50_D1TCI7 LysR family transcriptional regulator n=2 Tax=Bu... 275 1e-72 UniRef50_Q0VLU8 Transcriptional regulator, LysR family n=2 Tax=A... 275 1e-72 UniRef50_A4SSQ1 Transcriptional regulator, LysR family n=2 Tax=A... 275 1e-72 UniRef50_C6DDI5 Transcriptional regulator, LysR family n=4 Tax=E... 275 1e-72 UniRef50_Q391Q9 Transcriptional regulator, LysR family n=1 Tax=B... 275 2e-72 UniRef50_A9GGP1 LysR-family transcriptional regulator n=1 Tax=So... 275 2e-72 UniRef50_Q2BJ61 Transcriptional regulator, LysR family protein n... 275 2e-72 UniRef50_A6VSJ2 Transcriptional regulator, LysR family n=28 Tax=... 274 2e-72 UniRef50_B9Z7Z3 Transcriptional regulator, LysR family n=3 Tax=P... 274 2e-72 UniRef50_Q4KHX1 Transcriptional regulator, LysR family n=1 Tax=P... 274 2e-72 UniRef50_B7CP85 Transcriptional regulator, LysR family protein n... 274 2e-72 UniRef50_C7RKX8 Transcriptional regulator, LysR family n=20 Tax=... 274 3e-72 UniRef50_A4XX96 Transcriptional regulator, LysR family n=3 Tax=P... 274 3e-72 UniRef50_Q0ARX0 Transcriptional regulator, LysR family n=1 Tax=M... 274 3e-72 UniRef50_A6EW06 Transcriptional regulator n=2 Tax=Marinobacter R... 274 3e-72 UniRef50_A9AQX4 Transcriptional regulator, LysR family n=20 Tax=... 274 3e-72 UniRef50_B6JAE3 MexT protein n=1 Tax=Oligotropha carboxidovorans... 274 4e-72 UniRef50_Q46T42 Regulatory protein, LysR:LysR, substrate-binding... 273 5e-72 UniRef50_C5CVL6 Transcriptional regulator, LysR family n=5 Tax=c... 273 6e-72 UniRef50_B7V4S2 Probable transcriptional regulator n=7 Tax=Pseud... 273 7e-72 UniRef50_B7VQ45 Transcriptional regulator n=8 Tax=Vibrionales Re... 273 7e-72 UniRef50_D1RUJ7 Transcriptional regulatory protein n=1 Tax=Serra... 273 8e-72 UniRef50_B1J7P4 Transcriptional regulator, LysR family n=5 Tax=P... 273 8e-72 UniRef50_Q5LKP3 Transcriptional regulator, LysR family n=1 Tax=R... 272 9e-72 UniRef50_Q210Z5 Transcriptional regulator, LysR family n=2 Tax=A... 272 1e-71 UniRef50_Q1MWN1 LysR-type regulatory protein n=1 Tax=Sphingomona... 272 1e-71 UniRef50_A3VAM0 Nodulation protein d1 n=1 Tax=Rhodobacterales ba... 272 1e-71 UniRef50_Q13GK2 Transcriptional regulator, LysR family n=1 Tax=B... 272 2e-71 UniRef50_Q13JD9 Transcriptional regulator, LysR family n=1 Tax=B... 272 2e-71 UniRef50_A1U2R6 Transcriptional regulator, LysR family n=3 Tax=M... 271 2e-71 UniRef50_B7RYN1 Transcriptional regulator, LysR family protein n... 271 2e-71 UniRef50_C9PC13 Transcriptional regulator LysR family n=1 Tax=Vi... 271 2e-71 UniRef50_Q1N663 Regulatory protein, LysR:LysR, substrate-binding... 271 3e-71 UniRef50_A1VMI6 Transcriptional regulator, LysR family n=28 Tax=... 271 3e-71 UniRef50_A1U8Q8 Transcriptional regulator, LysR family n=1 Tax=M... 270 4e-71 UniRef50_A3YHF6 Transcriptional regulatory protein n=2 Tax=Gamma... 270 4e-71 UniRef50_Q15XJ4 Transcriptional regulator, LysR family n=1 Tax=P... 270 5e-71 UniRef50_A9FJR3 Transcriptional regulator, LysR family n=2 Tax=S... 269 7e-71 UniRef50_A9C385 Transcriptional regulator, LysR family n=2 Tax=c... 269 7e-71 UniRef50_B6RAE8 Transcriptional Regulator, LysR family n=1 Tax=P... 269 8e-71 UniRef50_A4GJC2 Transcriptional regulator LysR family protein n=... 269 8e-71 UniRef50_B9B1S8 Transcriptional regulator, LysR family n=1 Tax=B... 269 9e-71 UniRef50_A5WDE8 Transcriptional regulator, LysR family n=1 Tax=P... 269 1e-70 UniRef50_D0LUZ7 Transcriptional regulator, LysR family n=1 Tax=H... 268 2e-70 UniRef50_Q1LD16 Transcriptional regulator, LysR family n=8 Tax=P... 268 2e-70 UniRef50_D0FZR1 LysR-type transcriptional regulator n=2 Tax=Rhod... 268 2e-70 UniRef50_C2LG43 LysR-family transcriptional regulator n=4 Tax=En... 268 3e-70 UniRef50_D0RY94 Transcriptional regulator n=4 Tax=Acinetobacter ... 268 3e-70 UniRef50_Q5LN55 Transcriptional regulator, LysR family n=4 Tax=R... 267 3e-70 UniRef50_A4JED2 Transcriptional regulator, LysR family n=9 Tax=P... 267 4e-70 UniRef50_Q687Z9 LysR-type activator n=1 Tax=Sphingopyxis macrogo... 266 5e-70 UniRef50_A6FY23 Transcriptional regulator, LysR family protein n... 266 6e-70 UniRef50_Q1R0T8 Transcriptional regulator, LysR family n=9 Tax=G... 266 6e-70 UniRef50_B0C4T0 Transcriptional regulator, LysR family n=1 Tax=A... 266 7e-70 UniRef50_A1UYR8 Transcriptional regulator, LysR family n=32 Tax=... 266 7e-70 UniRef50_Q2KYC5 LysR-family transcriptional regulator n=9 Tax=Bu... 266 7e-70 UniRef50_C5CZA2 Transcriptional regulator, LysR family n=1 Tax=V... 266 7e-70 UniRef50_Q7NT25 Probable transcription regulator protein n=1 Tax... 266 1e-69 UniRef50_A1WMY5 Transcriptional regulator, LysR family n=1 Tax=V... 266 1e-69 UniRef50_Q0SCY7 Transcriptional regulator, LysR family protein n... 266 1e-69 UniRef50_C5CZY6 Transcriptional regulator, LysR family n=1 Tax=V... 265 1e-69 UniRef50_A0KH33 Transcriptional regulator, LysR family n=2 Tax=A... 265 1e-69 UniRef50_D1P5Q9 Transcriptional regulator, LysR family n=1 Tax=P... 265 1e-69 UniRef50_A5VEA0 Transcriptional regulator, LysR family n=1 Tax=S... 265 2e-69 UniRef50_A6X639 Transcriptional regulator, LysR family n=1 Tax=O... 264 2e-69 UniRef50_B7RV99 Transcriptional regulator, LysR family protein n... 264 2e-69 UniRef50_Q0K3U9 Transcriptional regulator, LysR-family n=2 Tax=B... 264 3e-69 UniRef50_Q8XRG7 Probable transcriptional regulator transcription... 264 4e-69 UniRef50_A0KIB7 Transcriptional regulator, LysR family n=2 Tax=A... 263 4e-69 UniRef50_A2SDX3 Transcriptional regulator, LysR family n=6 Tax=B... 263 5e-69 UniRef50_Q7MFJ9 Transcriptional regulator n=28 Tax=Vibrio RepID=... 263 6e-69 UniRef50_C6BS61 Transcriptional regulator, LysR family n=1 Tax=D... 263 6e-69 UniRef50_Q1M9F6 Putative LysR-family transcriptional regulator n... 263 6e-69 UniRef50_B5XYZ1 Transcriptional regulator, LysR family n=5 Tax=K... 263 7e-69 UniRef50_Q0BYJ0 Transcriptional regulator, LysR family n=1 Tax=H... 263 9e-69 UniRef50_D1SW87 Transcriptional regulator, LysR family n=1 Tax=A... 262 1e-68 UniRef50_D2B6V0 LysR family transcriptional regulator n=5 Tax=Ac... 262 1e-68 UniRef50_Q9FD34 PnbR n=2 Tax=Pseudomonas RepID=Q9FD34_PSEPU 262 1e-68 UniRef50_B2JFW9 Transcriptional regulator, LysR family n=39 Tax=... 261 2e-68 UniRef50_A4Z170 Putative transcriptional regulatory protein, Lys... 261 2e-68 UniRef50_C0ZNV8 Putative LysR family transcriptional regulator n... 261 2e-68 UniRef50_A0K340 Transcriptional regulator, LysR family n=1 Tax=B... 261 2e-68 UniRef50_C4I668 Transcriptional regulator, LysR family n=80 Tax=... 261 2e-68 UniRef50_A3YI62 Transcriptional regulator, LysR family protein n... 261 2e-68 UniRef50_A6GJJ5 Regulatory protein, LysR:LysR, substrate-binding... 261 2e-68 UniRef50_Q2CCM2 Transcriptional regulator, LysR family protein n... 261 2e-68 UniRef50_A1UXD8 Transcriptional regulator, LysR family n=41 Tax=... 261 3e-68 UniRef50_A6CYZ8 Hypothetical transcriptional regulator, LysR fam... 260 4e-68 UniRef50_B9JQ31 Transcriptional regulator n=1 Tax=Agrobacterium ... 260 4e-68 UniRef50_A3VWI6 Transcriptional regulatory protein n=1 Tax=Roseo... 259 6e-68 UniRef50_D2C014 Transcriptional regulator, LysR family n=1 Tax=D... 259 7e-68 UniRef50_Q7WJY9 Probable LysR-family transcription regulator n=1... 259 1e-67 UniRef50_B4ELV6 LysR family regulatory protein n=1 Tax=Burkholde... 259 1e-67 UniRef50_A7JRS0 Possible LysR family transcriptional regulator n... 259 1e-67 UniRef50_Q081Z6 Transcriptional regulator, LysR family n=1 Tax=S... 258 1e-67 UniRef50_B7VQV6 Transcriptional regulator n=10 Tax=Vibrionales R... 258 1e-67 UniRef50_Q15TE0 Transcriptional regulator, LysR family n=4 Tax=A... 258 2e-67 UniRef50_UPI0000383CFA COG0583: Transcriptional regulator n=1 Ta... 258 2e-67 UniRef50_A3RSL5 Transcriptional regulators, LysR family n=4 Tax=... 258 2e-67 UniRef50_Q46MT9 Regulatory protein, LysR:LysR, substrate-binding... 258 2e-67 UniRef50_B7QWJ8 Transcriptional regulator, LysR family n=1 Tax=R... 258 2e-67 UniRef50_C7RD08 Transcriptional regulator, LysR family n=1 Tax=K... 258 2e-67 UniRef50_Q5E7C7 Transcriptional regulator, LysR family n=5 Tax=V... 258 2e-67 UniRef50_A1U796 Transcriptional regulator, LysR family n=3 Tax=M... 258 2e-67 UniRef50_D2YJX0 Transcriptional regulator, LysR family n=1 Tax=V... 258 3e-67 UniRef50_A4SH82 Transcriptional regulator, LysR family n=2 Tax=A... 258 3e-67 UniRef50_D1P3H6 Transcriptional regulator, LysR family n=1 Tax=P... 258 3e-67 UniRef50_A8GZD3 Transcriptional regulator, LysR family n=22 Tax=... 257 3e-67 UniRef50_B4RWU1 Transcriptional regulator n=2 Tax=Alteromonas ma... 257 3e-67 UniRef50_Q88LJ0 Transcriptional regulator, LysR family n=1 Tax=P... 257 4e-67 UniRef50_Q399F7 Transcriptional regulator, LysR family n=1 Tax=B... 257 4e-67 UniRef50_P52679 PCP degradation transcriptional activation prote... 257 4e-67 UniRef50_Q7D3I0 Transcriptional regulator, LysR family n=1 Tax=A... 257 5e-67 UniRef50_B4E7M9 LysR family regulatory protein n=1 Tax=Burkholde... 257 5e-67 UniRef50_A1R1P0 Putative transcriptional regulator, LysR family ... 256 5e-67 UniRef50_C6XR04 Transcriptional regulator, LysR family n=1 Tax=H... 256 7e-67 UniRef50_A7K354 LysR substrate binding domain protein n=17 Tax=G... 255 1e-66 UniRef50_Q2SHJ0 Transcriptional regulator n=1 Tax=Hahella chejue... 255 1e-66 UniRef50_B8ERS8 Transcriptional regulator, LysR family n=1 Tax=M... 255 2e-66 UniRef50_Q7MC61 Transcriptional regulator n=9 Tax=Gammaproteobac... 255 2e-66 UniRef50_B1MJW3 Putative transcriptional regulator, LysR family ... 254 2e-66 UniRef50_D0RZK6 Transcriptional regulator n=1 Tax=Acinetobacter ... 254 2e-66 UniRef50_B9J825 Nod transcriptional regulator protein n=1 Tax=Ag... 254 2e-66 UniRef50_B1K4K0 Transcriptional regulator, LysR family n=3 Tax=B... 254 2e-66 UniRef50_Q7MQI2 Transcriptional regulator n=36 Tax=Gammaproteoba... 254 3e-66 UniRef50_B9Z947 Transcriptional regulator, LysR family n=1 Tax=L... 254 3e-66 UniRef50_B5ZVD7 Transcriptional regulator, LysR family n=4 Tax=R... 254 3e-66 UniRef50_A5VBV3 Transcriptional regulator, LysR family n=1 Tax=S... 254 3e-66 UniRef50_A0NZC9 LysR family regulatory protein n=3 Tax=Rhodobact... 254 4e-66 UniRef50_A5F3E5 Transcriptional regulator, LysR family n=29 Tax=... 254 4e-66 UniRef50_B9K150 Transcriptional regulator LysR family n=1 Tax=Ag... 254 4e-66 UniRef50_B5JUQ0 Transcriptional regulator, LysR family, putative... 253 5e-66 UniRef50_B7VJC4 Putative LysR-like regular protein n=4 Tax=Vibri... 253 5e-66 UniRef50_A6W028 Transcriptional regulator, LysR family n=1 Tax=M... 253 5e-66 UniRef50_A1UYG7 Transcriptional regulator, LysR family n=45 Tax=... 253 5e-66 UniRef50_UPI0001B54141 LysR family transcriptional regulator n=1... 253 6e-66 UniRef50_B2T3Y4 Transcriptional regulator, LysR family n=3 Tax=B... 253 7e-66 UniRef50_Q7MCZ8 Transcriptional regulator n=13 Tax=Vibrionaceae ... 253 7e-66 UniRef50_Q5ZSZ0 Transcriptional regulator, LysR family n=4 Tax=L... 253 8e-66 UniRef50_Q471I4 Regulatory protein, LysR:LysR, substrate-binding... 253 9e-66 UniRef50_A5VCH0 Transcriptional regulator, LysR family n=1 Tax=S... 253 9e-66 UniRef50_Q2BMZ3 Putative transcriptional regulator, LysR family ... 253 9e-66 UniRef50_A9F0I7 Transcriptional regulator, LysR family n=20 Tax=... 252 1e-65 UniRef50_Q8KY13 LysR-type transcriptional activator n=1 Tax=Rhiz... 252 1e-65 UniRef50_Q5QVJ9 Transcriptional regulator, LysR family n=1 Tax=I... 252 1e-65 UniRef50_P55359 Nodulation protein D 1 n=250 Tax=Proteobacteria ... 252 1e-65 UniRef50_A5V6I2 Transcriptional regulator, LysR family n=1 Tax=S... 252 1e-65 UniRef50_A4XED3 Transcriptional regulator, LysR family n=1 Tax=N... 251 2e-65 UniRef50_Q0JY95 Transcriptional regulator, LysR-family n=4 Tax=P... 251 2e-65 UniRef50_C6B2W9 Transcriptional regulator, LysR family n=4 Tax=R... 251 3e-65 UniRef50_A6ARN3 Transcriptional regulator, LysR family n=4 Tax=V... 251 3e-65 UniRef50_A8KZI9 Transcriptional regulator, LysR family n=4 Tax=A... 251 3e-65 UniRef50_A3X6E2 Transcriptional regulatory protein n=1 Tax=Roseo... 251 4e-65 UniRef50_A0KG94 Transcriptional regulator, LysR family n=5 Tax=G... 250 5e-65 UniRef50_B7X2W7 Transcriptional regulator, LysR family n=1 Tax=C... 250 5e-65 UniRef50_A1K8D7 Transcriptional regulator, LysR family n=1 Tax=A... 250 5e-65 UniRef50_Q11CG0 Transcriptional regulator, LysR family n=1 Tax=C... 250 6e-65 UniRef50_A4WEP5 Transcriptional regulator, LysR family n=1 Tax=E... 249 7e-65 UniRef50_Q081K6 Transcriptional regulator, LysR family n=2 Tax=A... 249 8e-65 UniRef50_A3Y6R5 Transcriptional regulator, LysR family protein n... 249 8e-65 UniRef50_A8FU12 Transcriptional regulator n=2 Tax=Gammaproteobac... 249 9e-65 UniRef50_A8FYY5 Transcriptional regulator, LysR family n=2 Tax=S... 249 1e-64 UniRef50_A6V5Q0 MexT protein n=1 Tax=Pseudomonas aeruginosa PA7 ... 249 1e-64 UniRef50_D0J6E9 Transcriptional regulator, LysR family n=2 Tax=C... 248 1e-64 UniRef50_Q0BCW3 Transcriptional regulator, LysR family n=30 Tax=... 248 2e-64 UniRef50_Q3S4D5 LysR-like regular protein n=1 Tax=Polaromonas na... 248 2e-64 UniRef50_A6V8B0 Transcriptional regulator, LysR family n=10 Tax=... 248 2e-64 UniRef50_A6F7C1 Transcriptional regulator n=1 Tax=Moritella sp. ... 248 2e-64 UniRef50_B5ZKB2 Transcriptional regulator, LysR family n=2 Tax=G... 248 3e-64 UniRef50_A9R140 Substrate-binding transcriptional regulator, Lys... 248 3e-64 UniRef50_Q15XK7 Transcriptional regulator, LysR family n=1 Tax=P... 247 3e-64 UniRef50_A6UK78 Transcriptional regulator, LysR family n=2 Tax=S... 247 4e-64 UniRef50_A8TNA4 Transcriptional regulator MexT n=1 Tax=alpha pro... 247 4e-64 UniRef50_A6W2N0 Transcriptional regulator, LysR family n=1 Tax=M... 247 4e-64 UniRef50_Q5E2I6 DNA-binding transcriptional activator n=65 Tax=G... 247 5e-64 UniRef50_A8IJ97 Putative transcriptional regulator n=1 Tax=Azorh... 247 5e-64 UniRef50_B1LYW9 Transcriptional regulator, LysR family n=10 Tax=... 247 5e-64 UniRef50_Q1GFT2 Transcriptional regulator, LysR family n=1 Tax=R... 246 9e-64 UniRef50_C5CV67 Transcriptional regulator, LysR family n=1 Tax=V... 246 9e-64 UniRef50_A8H854 Transcriptional regulator, LysR family n=1 Tax=S... 246 9e-64 Sequences not found previously or not previously below threshold: >UniRef50_A7ZTR6 HTH-type transcriptional regulator yidZ n=122 Tax=Gammaproteobacteria RepID=YIDZ_ECO24 Length = 319 Score = 316 bits (812), Expect = 4e-85, Method: Composition-based stats. Identities = 316/319 (99%), Positives = 319/319 (100%) Query: 1 MKKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPL 60 MKKSITTLDLNLLLCLQLLMQERSVTKAAKR+NVTPSAVSKSLAKLRAWFDDPLFVNSPL Sbjct: 1 MKKSITTLDLNLLLCLQLLMQERSVTKAAKRMNVTPSAVSKSLAKLRAWFDDPLFVNSPL 60 Query: 61 GLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIY 120 GLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSK+IY Sbjct: 61 GLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKRIY 120 Query: 121 QRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 QRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP Sbjct: 121 QRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 Query: 181 CVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQ 240 CVWLRKDHPALH+TWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQ Sbjct: 181 CVWLRKDHPALHETWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQ 240 Query: 241 SLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 SLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH Sbjct: 241 SLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 Query: 301 NPKIVWLRETIKNLYASMA 319 NPKIVWLRETIKNLYASMA Sbjct: 301 NPKIVWLRETIKNLYASMA 319 >UniRef50_B9Z480 Transcriptional regulator, LysR family n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z480_9NEIS Length = 303 Score = 316 bits (810), Expect = 9e-85, Method: Composition-based stats. Identities = 76/317 (23%), Positives = 125/317 (39%), Gaps = 20/317 (6%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 + T D+ LL + + RSVT+AA + + AVS +LAKLR FDDPLFV G+ P Sbjct: 1 MQTADVRLLQVFDEIYKTRSVTRAADNLGLGQPAVSIALAKLREHFDDPLFVRIANGMEP 60 Query: 65 TPLMVSMEQNLAEWMQMSNLLLDKPHHQTPR--GLKFELAAESPLMMIMLNALSKQIYQR 122 TP+ +E + + + +L+ P F ++ +++L L Q+ + Sbjct: 61 TPMARELEHAVRQALDALDLVFGHRIDFDPASSERTFCISMTDISQLVLLPKLWAQLRKT 120 Query: 123 YPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCV 182 P I + ++ + GE D+ + L + LF Sbjct: 121 SPGVHIDIVPLSAETPRMLETGEADLALGF----------MPQLEAGFYQQSLFRQRYVC 170 Query: 183 WLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 DHP +H L F H + + LD + G R IA+ +P + Sbjct: 171 VASTDHPRIHDELTLAQFETEEHAVVTSSGTGHLILDREIARQGITRHIALRVPNYLGIA 230 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 F+ Q D +L+ R Q + + +P + WH+R H+P Sbjct: 231 FVVEQTD-MLVTIPERLAQVLEGRGRFRVFPVPFELP-------DYAVKQHWHERYHHDP 282 Query: 303 KIVWLRETIKNLYASMA 319 WLR I +L ++ A Sbjct: 283 GNRWLRRVISDLLSAPA 299 >UniRef50_A6T413 Transcriptional regulator, LysR family n=1 Tax=Janthinobacterium sp. Marseille RepID=A6T413_JANMA Length = 302 Score = 313 bits (803), Expect = 5e-84, Method: Composition-based stats. Identities = 75/320 (23%), Positives = 136/320 (42%), Gaps = 23/320 (7%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 +I ++DLNLL+ +++ER+VT AA R+ V+ A+S +LA+LR F+DPLFV + G+ Sbjct: 1 MNIASVDLNLLVAFDAIVKERNVTSAAVRLGVSQPAMSNALARLRIIFNDPLFVRTSQGM 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGL--KFELAAESPLMMIMLNALSKQIY 120 PTP + + ++ ++ L P F +++L L K I Sbjct: 61 QPTPYAEQLIEPVSRACELITSALQINSVFDPATTTKTFSFYMTEIGEILLLPKLLKHIQ 120 Query: 121 QRYPQATIKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 P A +++R +A+ GE+D+ L L + L++D Sbjct: 121 VAAPNACVRVRRIPEQGAKEAMANGEIDLAVG----------LFPYLKAGFYQQRLYTDK 170 Query: 180 PCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDT-WALDNVLQELGRERTIAMSLPEF 238 +R+ HP +H + ++ PH+ + + A++ +L R I M+ F Sbjct: 171 FACIVRQGHPTVHDSLTPQQYVDTPHVIVMSANTGHDAAIEKILLTEHLRRKIVMTSQNF 230 Query: 239 EQSLFMAAQPDNLLLATAPRYCQYYNQ-LHQLPLVALPLPFDESQQKKLEVPFTLLWHKR 297 + Q D + R Q + ++ P+PF V WH+R Sbjct: 231 LVLPMIIEQTDAIA-TIPFRMAQKIASYSTGIKILESPIPFP-------NVDIKQHWHER 282 Query: 298 NSHNPKIVWLRETIKNLYAS 317 ++P W+R+ + L+ Sbjct: 283 FHYDPANKWMRDLMVTLFRE 302 >UniRef50_A9G5G2 Nodulation protein D n=2 Tax=Proteobacteria RepID=A9G5G2_SORC5 Length = 366 Score = 311 bits (797), Expect = 3e-83, Method: Composition-based stats. Identities = 73/315 (23%), Positives = 138/315 (43%), Gaps = 18/315 (5%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 + ++DLNL+ L L+ ER +T+A KR+ +T SA S +L +LR F DPLFV + GL Sbjct: 61 HDVASVDLNLVRVLGALLDERHLTRAGKRLGLTQSATSHALGRLRRLFGDPLFVRTSRGL 120 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQ--TPRGLKFELAAESPLMMIMLNALSKQIY 120 +PT + + + E M+ + F +A ++ L ++ Sbjct: 121 APTARAEELAEPVREAMRALDRCFRAEEPFVAASAARSFSVATADYGSFVLAPKLLDRLG 180 Query: 121 QRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 + P + LR D + + RG+ D+ + LP I +L+ + Sbjct: 181 REAPNVDLWLRALDASFEEQLARGDADVVVAPARRD--------GLPAGIHSRLLYRERF 232 Query: 181 CVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQ 240 +RK HP + + +L ++ H+ I + +D L +LG+ R +A+++P F Sbjct: 233 ACLVRKGHPLVKKGIDLASWTSMRHVFIAPRGTPGGVVDETLAQLGKRRRVALAVPHFLL 292 Query: 241 SLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 + + A D L++ R + + ++ L +V P+ + WH+R+ Sbjct: 293 APHVVAGSD-LVVTVGARVAEAFAEILPLRVVDPPVKLP-------GFEVRMYWHERHHR 344 Query: 301 NPKIVWLRETIKNLY 315 +P W R+ ++ Sbjct: 345 DPAQQWFRDAVRGAA 359 >UniRef50_C3KKF8 Putative transcriptional regulatory protein, LysR-family n=1 Tax=Rhizobium sp. NGR234 RepID=C3KKF8_RHISN Length = 304 Score = 308 bits (789), Expect = 2e-82, Method: Composition-based stats. Identities = 80/321 (24%), Positives = 136/321 (42%), Gaps = 22/321 (6%) Query: 1 MKK-SITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSP 59 MK +I ++DLNLL+ L+ E T+AA+RI +T AVS +L +LRA F DPLFV SP Sbjct: 1 MKPVNIASIDLNLLVVFDALVAEGHATRAAERIGLTQPAVSHALNRLRALFGDPLFVRSP 60 Query: 60 LGLSPTPLMVSMEQNLAEWMQMSNLLLD--KPHHQTPRGLKFELAAESPLMMIMLNALSK 117 G+ TP + + ++ ++L +F L ++L L+ Sbjct: 61 RGMVATPAALDAAPAIRSILEQVEVVLSGGPAFEPEESTRQFVLGLSDYAAFVLLPRLTA 120 Query: 118 QIYQRYPQATIKLRNWDYDS-LDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLF 176 ++ + P ++ +RN + L + G V++ P + E+L+ Sbjct: 121 RLEREAPNISLVIRNTSHGVGLPMLEEGSVELIAGN----------FPGPPSHMREELLY 170 Query: 177 SDVPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLP 236 + R DHPAL +LD +L H+ + + +D VL E G +R +A+++ Sbjct: 171 EEDFVCAGRGDHPALAYPLDLDRYLSLRHLQVSTRGNPHGYVDAVLAERGLKRKVAVTVG 230 Query: 237 EFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHK 296 F + F+ D L+ R + L A P+ WH Sbjct: 231 HFLMAPFLVDSSD-LVATEPRRLFEPMPSRLPLRFFAPPIDLP-------PFRVVQAWHA 282 Query: 297 RNSHNPKIVWLRETIKNLYAS 317 R+ +P WLR ++ + Sbjct: 283 RHEADPGHQWLRRVLREISQR 303 >UniRef50_Q2S713 Transcriptional regulator n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2S713_HAHCH Length = 329 Score = 304 bits (780), Expect = 3e-81, Method: Composition-based stats. Identities = 67/311 (21%), Positives = 135/311 (43%), Gaps = 22/311 (7%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 + +DLNLL+ +M E S++ AA+R+++T AVS ++A++R ++DPLFV + G+ P Sbjct: 1 MRNIDLNLLVIFDAIMTESSISGAAERLSMTQPAVSNAVARMRQVWNDPLFVKNGRGIQP 60 Query: 65 TPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQIYQR 122 T +S+ ++ + ++ P +F + ++ + + + Sbjct: 61 TTHALSLWHQVSGPLIQLKDAVNPQ-DFDPSTTRRRFRVGMSDITTDLIWLPMRRMVETE 119 Query: 123 YPQATIKLRNWDYDSLDA-ITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPC 181 P + + ++ ++ +T GEVD+ ++ + + LF Sbjct: 120 APNIDLHAVPANGNNSESILTNGEVDLIVG----------VMQEFRTSFRNDFLFESDYV 169 Query: 182 VWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQS 241 +RKDHP + L+ +L+ H+ + T +D L + G R +AM++ F Sbjct: 170 CAMRKDHPLAAEPLTLEKYLKADHLLVSLTGEATGFVDITLSQQGLSRRVAMTVNHFASV 229 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 + D + + + L + PL P +++WH R+ + Sbjct: 230 PALLEGSDLISIV-PNMVIAKGAKCGSLHVTKPPLEI-------RPTPVSMIWHARHDRD 281 Query: 302 PKIVWLRETIK 312 P ++WLRE IK Sbjct: 282 PGVLWLREKIK 292 >UniRef50_B0C5B7 Transcriptional regulator, LysR-family n=1 Tax=Acaryochloris marina MBIC11017 RepID=B0C5B7_ACAM1 Length = 300 Score = 303 bits (778), Expect = 4e-81, Method: Composition-based stats. Identities = 68/314 (21%), Positives = 130/314 (41%), Gaps = 20/314 (6%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 + DLNLL+ L +L++ERSV+K A+R+ ++ AVS +L +LR DP+ V L + Sbjct: 1 MDLRGFDLNLLVVLHILLKERSVSKTAERLQLSQPAVSAALNRLRTALKDPILVRDGLQM 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPR--GLKFELAAESPLMMIMLNALSKQIY 120 PTP + + + + L P F +A +++ L ++ Sbjct: 61 VPTPRAEQLVEPVQAIVSAIEQTLADPQPFDYSSISRTFRIATNDYGAFVLVPFLMNRMQ 120 Query: 121 QRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 + P T ++ + D A+ GE+D+ + + + + LFS+ Sbjct: 121 KIAPHLTFEIWDIALDVETALREGEIDLVIADAWTLRNCK----------CRKTLFSETF 170 Query: 181 CVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQ 240 +R++HP + +D +L+ H + T +D L + ++R + ++LP Sbjct: 171 TCLVRQNHPRVDTQLTMDDYLQEKHALVSARGRVTGNVDIALSQQNKQRQVQITLPHILA 230 Query: 241 SLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 M A D +++ A R + + L P+ D + W R + Sbjct: 231 IPAMMAATD-MIVTVATRIANRFAVDYHLQTFPPPITLD-------GFDIAMAWPHRMDN 282 Query: 301 NPKIVWLRETIKNL 314 + I WLR + + Sbjct: 283 DTAIRWLRNELVAI 296 >UniRef50_Q3KA14 LysR family regulatory protein n=24 Tax=Bacteria RepID=Q3KA14_PSEPF Length = 314 Score = 302 bits (775), Expect = 1e-80, Method: Composition-based stats. Identities = 66/320 (20%), Positives = 134/320 (41%), Gaps = 25/320 (7%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 +++ +DLNL + + E ++T+A + + +T AVS +LA+LR F+DPLFV + G+ Sbjct: 1 MNLSKVDLNLFIVFDAIYTEANLTRAGQIVGITQPAVSNALARLRETFNDPLFVRTAQGM 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGL--KFELAAESPLMMIMLNALSKQIY 120 PTP+ ++ + + + + + + P + ++ ++L L +++ Sbjct: 61 VPTPMAQNIIGPVRNALSLLRVSVQESRIFNPSQAVKTYRISMTDLTEAVILPPLFQRLR 120 Query: 121 QRYPQATIK-LRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 + P I+ + ++ + G +D + + + L D Sbjct: 121 RLAPTVIIESFLSKRRETTKELAAGRLDFAVDAPL----------NTDPQVRHVKLMEDR 170 Query: 180 PCVWLRKDHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEF 238 +RK HP + + LD +L HI I +S +D L ++G +R IA+ + Sbjct: 171 YVCAMRKGHPLATKEKFTLDDYLSLTHIHISSRRSGLGHVDLALGKMGIQRKIALRSQHY 230 Query: 239 EQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRN 298 + + Q D ++ + + + H L LP+ V L WH+ Sbjct: 231 LMASQVLQQTDMVMTVP-----ERFARRHDLHAFNLPV------NDVPPVETHLYWHEST 279 Query: 299 SHNPKIVWLRETIKNLYASM 318 +P W+RE + L + Sbjct: 280 DQDPANRWMREQMIELCQQV 299 >UniRef50_Q5P743 Transcriptional regulator, LysR family n=2 Tax=Betaproteobacteria RepID=Q5P743_AZOSE Length = 301 Score = 301 bits (772), Expect = 2e-80, Method: Composition-based stats. Identities = 67/315 (21%), Positives = 122/315 (38%), Gaps = 20/315 (6%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 + TL++ L + + RSV++AA+ + + AVS +L KLR F DPLFV + G+ P Sbjct: 1 METLEIRQLSVFDEIYKTRSVSRAAENLGLGQPAVSIALGKLREHFGDPLFVRTSAGMEP 60 Query: 65 TPLMVSMEQNLAEWMQMSNLLLDKPHHQTP--RGLKFELAAESPLMMIMLNALSKQIYQR 122 TPL + + + + + P F +A +++L L +++ Sbjct: 61 TPLGEELAEPIRVAVAAVSAASGHRAEFDPTRARRTFRIAMTDISQLVLLPRLWERLRTV 120 Query: 123 YPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCV 182 P I + N ++ + GEVD+ + L + LF Sbjct: 121 APGIHIDIANLSANTAGMLESGEVDVALGF----------MPQLEAGFYQQALFRQHYVC 170 Query: 183 WLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 HP + + L F H + + +D + +R + + +P F Sbjct: 171 MASATHPRIRRGLTLAQFEAEEHAVVSTSGTGHLIIDREIARQDIKRRVVLRIPSFVGIA 230 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 ++ + LL+ R + +L + +P P E WH R +++P Sbjct: 231 YVVERT-ALLVTIPQRLGELLADEERLRVYPVPFPLP-------EYAVKQHWHGRYNNDP 282 Query: 303 KIVWLRETIKNLYAS 317 WLR I+ L +S Sbjct: 283 GNRWLRALIQELLSS 297 >UniRef50_B1KAV0 Transcriptional regulator, LysR family n=5 Tax=Burkholderia cepacia complex RepID=B1KAV0_BURCC Length = 345 Score = 301 bits (772), Expect = 2e-80, Method: Composition-based stats. Identities = 74/318 (23%), Positives = 125/318 (39%), Gaps = 20/318 (6%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 I +DLNLL L+++R VT+A I ++ A+S +L+KLR F+DPLFV + G+ Sbjct: 1 MDIRQVDLNLLKVFDALLKKRHVTQAGVSIGLSQPAMSYALSKLRELFEDPLFVRTGRGM 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQIY 120 PTP ++ + +A + + + P F L M+ L L + Sbjct: 61 EPTPRAQALGEPVARLLDLVQTEILPMPEFRPAESSRNFVLCMSDIGEMVFLPRLESFLD 120 Query: 121 QRYPQATIKLRNWD-YDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 + P +IK + + + G+VD+ ++ + L+ Sbjct: 121 KAAPHVSIKTVALSMPELEEGLASGDVDLAIGYFPGLNSE---------SLKRKALYRHS 171 Query: 180 PCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFE 239 R DHP + T +LD + H+ + E + L + LG + S P F Sbjct: 172 YVCIARDDHPEIGDTLSLDQYRAAAHVMVHPEGREQDVLARTHERLGIRVNVRFSTPRFI 231 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 F+ A D + A + + + + L+ LP P L WH R Sbjct: 232 GVPFVVAGSDMIA-AVPQAVGRRFAEFVNVKLLPLPFPAPT-------YELYLHWHPRFH 283 Query: 300 HNPKIVWLRETIKNLYAS 317 H P W+R+ + L Sbjct: 284 HEPANRWIRDAMSELVKG 301 >UniRef50_C6XIT5 Transcriptional regulator, LysR family n=1 Tax=Hirschia baltica ATCC 49814 RepID=C6XIT5_HIRBI Length = 318 Score = 300 bits (770), Expect = 3e-80, Method: Composition-based stats. Identities = 74/314 (23%), Positives = 132/314 (42%), Gaps = 21/314 (6%) Query: 6 TTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPT 65 DLNLL L +ER+VT+AA+R+NVT AVS +L++LR F D LF+ +P G+ PT Sbjct: 3 KKFDLNLLNTFDALWRERNVTRAARRLNVTQPAVSNALSRLRETFGDELFIRTPSGVDPT 62 Query: 66 PLMVSMEQNLAEWMQMSNLLLDKPHHQTP--RGLKFELAAESPLMMIMLNALSKQIYQRY 123 + ++ E ++ L P F + A ++L L + + ++ Sbjct: 63 ERCSEIAIDVREALRHVERTLASHDSFDPTVSERTFRIGAMDYFDHVVLPPLMEDLRKKA 122 Query: 124 PQATIKLRNWD-YDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCV 182 P+ +++ ++ DA+ G++D F + P I++ + + + Sbjct: 123 PRVDLRISPVKLGETYDALDSGDLDFLFFSG----------TEPPKRINFSPMLEEKFVL 172 Query: 183 WLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 +R +HP + Q LD + HI +D++L E G R +A++ Sbjct: 173 IMRANHPKMCQEMTLDAYADLTHIVFSTRGDSHTRIDDLLAENGLRRRVALTSSHHTSIA 232 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 D + L+ R Y L V P+ F L W +R + +P Sbjct: 233 ETVRDTDMVALS-PSRLAHRYVHRGGLIAVQPPVEFP-------HFHLRLYWSRRLNSDP 284 Query: 303 KIVWLRETIKNLYA 316 +WLR + ++ Sbjct: 285 GAMWLRNILGDVCK 298 >UniRef50_A1W256 Transcriptional regulator, LysR family n=2 Tax=Comamonadaceae RepID=A1W256_ACISJ Length = 323 Score = 300 bits (768), Expect = 6e-80, Method: Composition-based stats. Identities = 71/317 (22%), Positives = 123/317 (38%), Gaps = 12/317 (3%) Query: 4 SITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLS 63 + TLDLNLL +M ER++T+AA+++ +T AVS +L +LR D L G+ Sbjct: 5 NFRTLDLNLLRVFDEVMAERNLTRAAEKLAITQPAVSNALRRLREVLGDELVTRRGHGVE 64 Query: 64 PTPLMVSMEQNLAEWMQMSNLLLDK-PHHQTPRGLKFELAAESPLMMIMLNALSKQIYQR 122 PTP +++ + + L F LA ++ L + + + Sbjct: 65 PTPRALALWPAVRHALAQLQETLSPGRFDPASAQTTFVLAMADATGATLIPPLIEIVERE 124 Query: 123 YPQATIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYE--VLFSDV 179 P ++++ D + D+ + + + +E L+ Sbjct: 125 APGVSLRVVPLTTRDPRRLLDEESADMAVGYFPAVLADLTARAQSDNVVAHESTRLYDSQ 184 Query: 180 PCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFE 239 +R DHP LD + H+ + + +D L LGRER I +++ +F Sbjct: 185 YVCVMRADHPLAAVPMTLDLYCAARHLLVSFSGKPFGFIDGALAALGRERRIVLTVNQFF 244 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 + + A D LL + + +L LP+ V LWH+R + Sbjct: 245 TAGRVVATTD-LLTVLPRHFVGVASVRDELVWRPLPMTLP-------PVHVDALWHRRRN 296 Query: 300 HNPKIVWLRETIKNLYA 316 H+P WLRE I Sbjct: 297 HDPAHRWLREAIARAAR 313 >UniRef50_P10183 HTH-type transcriptional activator nahR n=67 Tax=Bacteria RepID=NAHR_PSEPU Length = 300 Score = 297 bits (761), Expect = 4e-79, Method: Composition-based stats. Identities = 72/316 (22%), Positives = 122/316 (38%), Gaps = 21/316 (6%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 + LDLNLL+ L+ +R V+ A+ + +T AVS +L +LR DPLFV + G+ Sbjct: 1 MELRDLDLNLLVVFNQLLVDRRVSITAENLGLTQPAVSNALKRLRTSLQDPLFVRTHQGM 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTP--RGLKFELAAESPLMMIMLNALSKQIY 120 PTP + + + M L P F LA + + L + Sbjct: 61 EPTPYAAHLAEPVTSAMHALRNALQHHESFDPLTSERTFTLAMTDIGEIYFMPRLMDVLA 120 Query: 121 QRYPQATIK-LRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 + P I +R+ + A+ G VD+ LL +L L + Sbjct: 121 HQAPNCVISTVRDSSMSLMQALQNGTVDLAVG----------LLPNLQTGFFQRRLLQNH 170 Query: 180 PCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFE 239 RKDHP + L+ F Y H+ + + +D + +G R I + +P F Sbjct: 171 YVCLCRKDHPVTREPLTLERFCSYGHVRVIAAGTGHGEVDTYMTRVGIRRDIRLEVPHFA 230 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 + + D LL R + L + P+ E+ + WH + Sbjct: 231 AVGHILQRTD-LLATVPIRLADCCVEPFGLSALPHPVVLP-------EIAINMFWHAKYH 282 Query: 300 HNPKIVWLRETIKNLY 315 + +WLR+ + +L+ Sbjct: 283 KDLANIWLRQLMFDLF 298 >UniRef50_Q2S7V2 Transcriptional regulator n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2S7V2_HAHCH Length = 310 Score = 295 bits (757), Expect = 1e-78, Method: Composition-based stats. Identities = 82/318 (25%), Positives = 135/318 (42%), Gaps = 21/318 (6%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 I+ +DLNL + + E +T+A++ +++T AVS +L +LR D LF+ S G+ Sbjct: 1 MHISRIDLNLFVVFDAIYSEGGITRASEVLHLTQPAVSHALNRLRETLGDELFIRSSRGM 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGLK--FELAAESPLMMIMLNALSKQIY 120 +PTP + + + + L + P L+ F L +++L AL K Sbjct: 61 TPTPYAHQLIGTVRQALNQLQRGLHQGQEFAPAQLETSFRLCVRDLFDVLLLPALIKNCR 120 Query: 121 QRYPQATIK-LRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 P+ LR+ L + G +D+ ++L S +I +E LF D Sbjct: 121 AIAPKVVFNCLRSPREQILHDLASGRIDLA----------ADVLISHDDSICHEKLFEDR 170 Query: 180 PCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFE 239 LR+DHPAL W+L LR+PH+ + + D L G +R + + P F Sbjct: 171 LTCLLRRDHPALASEWSLAEMLRWPHVQVSSREHGPGYEDIQLSRHGLQRKLGLRTPNFY 230 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 + AA D +L A + + Q L ++ PL + L WH+ Sbjct: 231 GAALTAANSDLILCA-PEQVARKLTQTIPLQVMPFPLTL-------NPLETYLYWHRSTD 282 Query: 300 HNPKIVWLRETIKNLYAS 317 P +WLRE + A Sbjct: 283 REPAHIWLREQTQRALAQ 300 >UniRef50_Q12H69 Transcriptional regulator, LysR family n=14 Tax=Burkholderiales RepID=Q12H69_POLSJ Length = 342 Score = 295 bits (756), Expect = 1e-78, Method: Composition-based stats. Identities = 76/317 (23%), Positives = 125/317 (39%), Gaps = 12/317 (3%) Query: 4 SITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLS 63 + TLDLNLL +M ERS+T+AA+ +++T AVS +L +LR D L S G++ Sbjct: 29 NFRTLDLNLLRVFDEVMAERSLTRAARNLSLTQPAVSNALRRLRETLGDELVQRSGQGMA 88 Query: 64 PTPLMVSMEQNLAEWMQMS-NLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQR 122 PTP ++ + E +Q L+ F LA ++ L + + Q Sbjct: 89 PTPRARAIWPAVREALQRLQESLIPDEFVPGQATTTFVLAMADATAAELIPGLIETLEQE 148 Query: 123 YPQATIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSR--ELLSSLPLAIDYEVLFSDV 179 P ++++ D + D+ S S P+ + L+ Sbjct: 149 APGVSMRVIPLTTRDPRRLLDEQACDLAVGYFPSVLADLTAHAQSGEPMPFQHRRLYDGE 208 Query: 180 PCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFE 239 +RK HP LD F H+ + + +D L LGRER + +++ +F Sbjct: 209 YVCVMRKGHPLASGPLTLDRFCAARHMLVSFSGRPYGFIDESLASLGRERQVVLTVNQFF 268 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 + + A + LL + + QL L LP V +WH+R+ Sbjct: 269 TAGRVVANSN-LLTVLPRHFVRVTGIAEQLVLRPLPFDVSA-------VHVDAVWHRRSQ 320 Query: 300 HNPKIVWLRETIKNLYA 316 VWLRE + Sbjct: 321 QRGAHVWLREAVLRAAD 337 >UniRef50_A9GLW1 Transcriptional regulator, LysR family n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9GLW1_SORC5 Length = 315 Score = 294 bits (755), Expect = 2e-78, Method: Composition-based stats. Identities = 74/297 (24%), Positives = 130/297 (43%), Gaps = 20/297 (6%) Query: 22 ERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSMEQNLAEWMQM 81 E SVT+AA R+ ++ SA+S +L +LR DDP+ V +P G+ PTP + + E + Sbjct: 35 EGSVTRAAARVGLSQSAMSHALGRLRVLIDDPVLVRTPRGMIPTPRAQELIGPIREALAK 94 Query: 82 SNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQIYQRYPQATIKLRNWDYDSLD 139 + + P F +A + +I+L L +++ P + R +D + Sbjct: 95 IEATVARSPRFEPATARRSFTVATVDYVELILLPRLVQKLVSEAPFIDLVARPYDSEMWS 154 Query: 140 AITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPALHQTWNLDT 199 A+ G+VD+ LL +LP + L + +R+ HPA+ L T Sbjct: 155 AMETGKVDLAIG----------LLPALPAGFYRQRLIEERYMCVVRRSHPAVRGKLTLKT 204 Query: 200 FLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQPDNLLLATAPRY 259 + PH I +D VL E G R +A+ +P F + + AQ D L+L R Sbjct: 205 YTSLPHALISPRGEGGGRVDEVLAERGLSRRVALQIPHFLVAAHIVAQTD-LVLTVPARI 263 Query: 260 CQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWLRETIKNLYA 316 + + ++ +L ++ P+ +WH+R++ +P WLR + Sbjct: 264 ARVFAEMEELHVMKPPVEL-------GGFSVDQVWHERHAKDPAHTWLRGVFAEIAR 313 >UniRef50_Q473Q1 Transcriptional regulator, LysR family n=9 Tax=Burkholderiaceae RepID=Q473Q1_RALEJ Length = 315 Score = 294 bits (753), Expect = 3e-78, Method: Composition-based stats. Identities = 75/321 (23%), Positives = 135/321 (42%), Gaps = 21/321 (6%) Query: 2 KKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLG 61 ++ +DLNL + + E S+T AA+++N+T AVS +L +LR FDDPLF G Sbjct: 3 AMQLSRIDLNLFVVFDAIYSEGSITAAARQLNLTQPAVSHALGRLRGLFDDPLFERRGQG 62 Query: 62 LSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQI 119 ++PTPL S+ + +Q L H P +F + L +L L ++ Sbjct: 63 MAPTPLARSLASEVRSALQSFARTLQDTPHFDPTNTVRRFTIGMRDALESTLLPPLMARV 122 Query: 120 YQRYPQATIKLRNWDYDSLD-AITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSD 178 PQ I +D ++ + G +D ++L + AI + +D Sbjct: 123 TSVAPQVEIAAIRFDRREMESELLAGTIDAAI----------DILLPVSPAIHHAQFMAD 172 Query: 179 VPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEF 238 V R+DHP + + L+ +L H+ + + D L +G R + + + Sbjct: 173 PMIVLARRDHPLVKKELTLERYLAAEHVHVSSRRRGAGLEDQALHRMGLTRRVRLRCQHY 232 Query: 239 EQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRN 298 + + + D LL RY + N+ + +++LP + L WH Sbjct: 233 AAACRVVSCTD-LLATLPLRYARIANEPYANRILSLPFKVP-------SLELHLYWHAGG 284 Query: 299 SHNPKIVWLRETIKNLYASMA 319 ++ WLRE + + +S+ Sbjct: 285 ENDGANRWLREQLMAVMSSLG 305 >UniRef50_C6ARG9 Transcriptional regulator, LysR family n=7 Tax=Proteobacteria RepID=C6ARG9_RHILS Length = 310 Score = 293 bits (751), Expect = 6e-78, Method: Composition-based stats. Identities = 68/316 (21%), Positives = 132/316 (41%), Gaps = 21/316 (6%) Query: 7 TLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTP 66 DLNLL LM+ER+VT+AA+++ +T AVS +L +LR DPLF+ G+ PT Sbjct: 2 KYDLNLLPVFVALMEERNVTRAAEQLGMTQPAVSNALNRLRETLRDPLFIRERYGMKPTE 61 Query: 67 LMVSMEQNLAEWMQMSNLLLDKPHHQTP--RGLKFELAAESPLMMIMLNALSKQIYQRYP 124 + ++ + + + ++ P +F +A S + +++ + ++ + P Sbjct: 62 MAEALAPVIRGALASLDDVILGQQAFDPARATRQFTIAPNSYVEFVLMPVIVARLRECAP 121 Query: 125 QATIKLRNWDYDSLD-AITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVW 183 ++L + D + G ++ + P + + L D Sbjct: 122 GIRLRLTPFGNDLAETGAMSGATEMVLGR----------IVEPPDNMVVQHLMDDGLACV 171 Query: 184 LRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 +RKDHP + ++ + + + R H+++ L +LQ+ G R +++S+ F Sbjct: 172 VRKDHPEIAESISEEQYQRMRHVNVLPPGRMRVGLFQMLQQAGLRRDVSVSVTHFLAVPE 231 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 M A D C + +L ++ P+ P L WH R ++P Sbjct: 232 MVAVTDY-CATLPRLICHRLARDPRLKVLPAPVDL-------GRFPVELAWHVRYRNDPA 283 Query: 304 IVWLRETIKNLYASMA 319 WLR I + ++ Sbjct: 284 HRWLRSLISEVAKEVS 299 >UniRef50_Q15UP0 Transcriptional regulator, LysR family n=4 Tax=Alteromonadales RepID=Q15UP0_PSEA6 Length = 305 Score = 293 bits (750), Expect = 8e-78, Method: Composition-based stats. Identities = 78/319 (24%), Positives = 135/319 (42%), Gaps = 24/319 (7%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 ++ +DLNL + S+TKAA + +T AVS SLA+LR +DPLFV + + Sbjct: 1 MNLNRIDLNLFAVFDAIYTAGSLTKAADVLCITQPAVSNSLARLREMLNDPLFVRTGHSM 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFE--LAAESPLMMIMLNALSKQIY 120 +PTP ++ E + + + + H P + AA L ++ L+ Q+ Sbjct: 61 TPTPAAQNIIGPAREALGLLRKSVQESHTFDPATAEISYNFAARDLLEASIMPRLTAQLQ 120 Query: 121 QRYPQATIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 P T+ + + + A+ G +D + + + + + + D Sbjct: 121 NVAPNITLTNYDISRSNIVSAMASGSLDF---------YADASSAFVDPHLCKQKIAEDR 171 Query: 180 PCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFE 239 V R++HPAL Q NLDTFL+ HI+I ++ +D L +L +R + M F Sbjct: 172 FVVIARRNHPALSQGLNLDTFLQLGHINISQRRTGAGPIDVALDKLNLKRRVVMRGQHFL 231 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 + + D L+A P + + + + LP V + L WH Sbjct: 232 TVPAVIVKTD--LIACVPY---HLAKHYDCSIYELPFEL-------APVEYFLYWHVSAD 279 Query: 300 HNPKIVWLRETIKNLYASM 318 H+ +WLRE I + + Sbjct: 280 HDHAHMWLREQIAEVVTTF 298 >UniRef50_A0LD88 Transcriptional regulator, LysR family n=1 Tax=Magnetococcus sp. MC-1 RepID=A0LD88_MAGSM Length = 312 Score = 292 bits (749), Expect = 9e-78, Method: Composition-based stats. Identities = 69/315 (21%), Positives = 128/315 (40%), Gaps = 19/315 (6%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 + DLNLL+ LM ER VT+A +R+ +T +A+S +L +LR FDDPLF+ + + P Sbjct: 9 LNKFDLNLLVAFDALMSERGVTRAGRRLGITQAAMSNTLRRLRTAFDDPLFIKTGARMEP 68 Query: 65 TPLMVSMEQNLAEWMQMSNLLLD-KPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRY 123 TP + + + ++ ++ LD F + + ++ AL + + Sbjct: 69 TPRAMELSGMIEAALKQVHVALDNDSFDPANSHYVFRVGMVDYTVPLVFPALLDHLEKYA 128 Query: 124 PQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVW 183 P +++ N + + GEVD+ S L P + V+ Sbjct: 129 PNCILEVVNTGDFEGEMLESGEVDLVLSR----------LDQAPRGLKSRVVGEIPFVCI 178 Query: 184 LRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 R HP + + L+ +L+ H+ +D L+ + +ER + + L F Sbjct: 179 YRPGHPLIKEPMTLEQYLQARHVHYYPPMVKEGLVDLGLKAINQERNVVVRLDSFGMVPT 238 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 + A+ D + T L + LP + F ++WH R+ + Sbjct: 239 LVAETDLIAAVTHTS-AHVIAPAMGLKVQPLPFEAP-------PLQFVMVWHDRSEESAP 290 Query: 304 IVWLRETIKNLYASM 318 W RE + ++ S+ Sbjct: 291 HQWFREQVLHMLISL 305 >UniRef50_B4X4B4 LysR substrate binding domain protein n=1 Tax=Alcanivorax sp. DG881 RepID=B4X4B4_9GAMM Length = 304 Score = 292 bits (749), Expect = 1e-77, Method: Composition-based stats. Identities = 74/320 (23%), Positives = 137/320 (42%), Gaps = 23/320 (7%) Query: 1 MKKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPL 60 MK ++ ++DLNLL +M+ +++AA+ + ++ A+S +L +LR F D LFV + Sbjct: 1 MKLNLRSIDLNLLPVFDAIMEAGQLSRAAESLGMSQPAISAALQRLRHTFGDTLFVRTHH 60 Query: 61 GLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQ 118 G++PTP + L + L+ + P F + + M++L L Sbjct: 61 GMTPTPRARELHDQLGPQLVALRDTLNPENRFDPATSQRHFRILSVDYFEMVVLGPLLAT 120 Query: 119 IYQRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSD 178 + Q+ P +++ D D D + +G D+ S + + + VL + Sbjct: 121 LRQQAPHVVLEIIAADDDMPDELHKGRADL----------SVDAFVADDDRLQRNVLLEE 170 Query: 179 VPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEF 238 V R+ HP + + FL H+ + ++ LD +L G +R + +F Sbjct: 171 KLVVIARRSHPHIKGHCDKQQFLDAEHVVL-PNRNRQLPLDQILNAPGWQRRTGARVTQF 229 Query: 239 EQSLFMAAQPDNLLLATAP-RYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKR 297 L + D L+AT P R Q Y + QL ++ P+ VP ++W Sbjct: 230 ASMLAVCGGSD--LIATVPDRLAQQYAETMQLQVLPFPVALP-------PVPIYMIWSPT 280 Query: 298 NSHNPKIVWLRETIKNLYAS 317 +P WLR+ +++ A Sbjct: 281 QQRDPAHRWLRQQLEHTIAQ 300 >UniRef50_A8GKS5 Transcriptional regulator, LysR family n=1 Tax=Serratia proteamaculans 568 RepID=A8GKS5_SERP5 Length = 314 Score = 292 bits (748), Expect = 1e-77, Method: Composition-based stats. Identities = 70/318 (22%), Positives = 121/318 (38%), Gaps = 20/318 (6%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 ++ +DLNLL+ + ++RSV A + + ++ AVS +LA+LR FDDP+FV + Sbjct: 1 MNLKNVDLNLLVVFDAIFRQRSVGLAGQMLGISQPAVSHALARLRQLFDDPMFVRINNEM 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPR--GLKFELAAESPLMMIMLNALSKQIY 120 PT + ++ + M + +P P L L L + Sbjct: 61 RPTDRASELMPSVERVLSMIRDDVLQPVGFDPAANRRTLTLCMPDIGEQYFLPPLINHLA 120 Query: 121 QRYPQATIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 Q P + +A+ G VD+ R+ + LF Sbjct: 121 QVAPGMAVVSHELAPAQLEEALESGRVDLAIGYFPDLRRAV---------FYQQRLFYSG 171 Query: 180 PCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFE 239 C +R+ HP + +T +L FL+ H++ + ++E G R + + F Sbjct: 172 FCCAVRQGHPQIGKTLSLPQFLQAEHVTARLRIRSQEIAEQAMREQGIVRNVKLQTSHFL 231 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 + AQ D L T Q ++ + +P P + P WH+R Sbjct: 232 SLTQIIAQTDLLATVTYEA-AQLLQAAGKVHIYPVPFPIP-------QFPVMQYWHERAH 283 Query: 300 HNPKIVWLRETIKNLYAS 317 H+ WLR I+ L+ Sbjct: 284 HDRGNQWLRGEIRGLFQR 301 >UniRef50_Q12M05 Transcriptional regulator n=3 Tax=Gammaproteobacteria RepID=Q12M05_SHEDO Length = 309 Score = 291 bits (747), Expect = 2e-77, Method: Composition-based stats. Identities = 71/318 (22%), Positives = 136/318 (42%), Gaps = 19/318 (5%) Query: 1 MKKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPL 60 M ++ LDLNLL+ +M+E+S++ AA+++ +T +VS ++A++R + DPLF+ Sbjct: 1 MSAGMSKLDLNLLVIFDAIMKEQSISAAAEQLAMTQPSVSNAVARMRHNWKDPLFIKQGR 60 Query: 61 GLSPTPLMVSMEQNLAEWMQMSNLLLDK-PHHQTPRGLKFELAAESPLMMIMLNALSKQI 119 G+ P+P +++ Q +A ++ + + F +A + AL + + Sbjct: 61 GIKPSPFALALWQQVASPLEQIRSAVSSKTFNAAHSERTFRIAITDGTSGLFWPALRRHL 120 Query: 120 YQRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 + P+ + + D + EVD+ E + I + LF + Sbjct: 121 ERHAPKINLHAVPYKLDGEALLVNAEVDLVLDYYE----------NRHPQILSQHLFDNQ 170 Query: 180 PCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFE 239 + K H +T LD F H+ + + +D L +LG R IAM++ F Sbjct: 171 FVCVMAKAHALSEKTLTLDDFAAAEHLLVSLSGDASGTVDRKLAQLGHSRRIAMTVNSFA 230 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 + + + L+ + L +L + LP VP ++ WH RN Sbjct: 231 SAKTLIEES-RLISTLPYSIIASWQSLDKLTVKTLPFTVP-------SVPISMAWHSRND 282 Query: 300 HNPKIVWLRETIKNLYAS 317 + + WLRE I ++ + Sbjct: 283 ASISLRWLREAIVDIVKT 300 >UniRef50_A1U1I0 Transcriptional regulator, LysR family n=67 Tax=Proteobacteria RepID=A1U1I0_MARAV Length = 336 Score = 289 bits (741), Expect = 9e-77, Method: Composition-based stats. Identities = 69/324 (21%), Positives = 131/324 (40%), Gaps = 34/324 (10%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 I+ +DLNLL+ L +L++ER+VTKAA + +T A+S L +LR F DPL V + G+ Sbjct: 1 MDISRVDLNLLVYLDVLLRERNVTKAANHLGITQPAMSNGLRRLRDLFGDPLLVRTSEGM 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTP--RGLKFELAAESPLMMIMLNALSKQIY 120 + T ++ + + + + F + A ++ + ++I Sbjct: 61 TATERARELQPLVRGILSDIEQAVQEKTPFAAGESQRVFRIMASDYAESCLMPRVLRRIR 120 Query: 121 QRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 Q P T+ + S + +G +D+ + +P + + L+++ Sbjct: 121 QEAPHVTLDVLTPSDVSFLDVEQGRLDMAINR----------FDKIPQSFHQKTLWTEYF 170 Query: 181 CVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWA------------LDNVLQELGRE 228 + +P L + + LDT+L HI + +D L +GR+ Sbjct: 171 ACLMNARNPILKEPFTLDTYLDASHIWVSKTGFGVGVGVNPKDVQRLGWVDEALGRMGRK 230 Query: 229 RTIAMSLPEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQ-LPLVALPLPFDESQQKKLE 287 R I++ ++ ++ +A Q D L+AT P + + + L + P Sbjct: 231 RQISVFTRHYQVAMLLAEQHD--LIATLPSRAAWLQKDNPNLVVKVPPFEIP-------P 281 Query: 288 VPFTLLWHKRNSHNPKIVWLRETI 311 + W HN WLR+ I Sbjct: 282 FELKMAWSPLLQHNSDHQWLRKLI 305 >UniRef50_A3QJ07 Transcriptional regulator, LysR family n=25 Tax=Alteromonadales RepID=A3QJ07_SHELP Length = 330 Score = 289 bits (741), Expect = 9e-77, Method: Composition-based stats. Identities = 99/320 (30%), Positives = 164/320 (51%), Gaps = 13/320 (4%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 ++ +DLNLL+ LQ+L++ERSVT+AA R++++ SA+SKSL +LR DPLF+ + GL Sbjct: 4 DNLARIDLNLLVMLQVLLEERSVTRAASRLHLSQSALSKSLNRLRDTLGDPLFIRTAHGL 63 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKP-HHQTPRGLKFELAAESPLMMIMLNALSKQIYQ 121 PT + Q L + +Q L P + +F A ++ + Sbjct: 64 KPTAHAALLGQQLPDMLQGLYQLTQPPSFNPASSRRQFSFAMVESAYETLIPYFIGPLLN 123 Query: 122 RYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPC 181 P + W SL ++ +G++D G +GR+ +P+S ++ LP I ++ LF+D Sbjct: 124 NAPNLRLDSYLWTEKSLSSLQKGQIDFGITGRDINPQSDLIIDRLPEGIAHQTLFTDHQV 183 Query: 182 VWLRKDHPALHQ----TWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPE 237 +R+ HP L W+LD +L H+ + E ++ WALD L + G+ R ++ ++P+ Sbjct: 184 CLVRQGHPMLPAIRNHQWDLDIYLEMSHVQVRCEGNEWWALDYFLAKSGQRRHLSTTVPD 243 Query: 238 FEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKR 297 F + + A D L+ + + +L+ L LPLPFD + + LLWH+R Sbjct: 244 FYGAASVCAHSD-LIFTLPSSFAAHARKLYALE--ELPLPFDFH-----SLAYVLLWHER 295 Query: 298 NSHNPKIVWLRETIKNLYAS 317 N P W+RETI A Sbjct: 296 NDDEPGHKWIRETICKRVAQ 315 >UniRef50_A0LD87 Transcriptional regulator, LysR family n=1 Tax=Magnetococcus sp. MC-1 RepID=A0LD87_MAGSM Length = 322 Score = 289 bits (740), Expect = 1e-76, Method: Composition-based stats. Identities = 80/321 (24%), Positives = 135/321 (42%), Gaps = 23/321 (7%) Query: 1 MKKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPL 60 MK ++ DLNLL+ LM ER VT+A + + +T +A+S +L +LR FDDPLFV + Sbjct: 6 MKHNLNKFDLNLLVAFDTLMTERGVTRAGRALGITQAAMSNTLRRLRELFDDPLFVKTGS 65 Query: 61 GLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTP--RGLKFELAAESPLMMIMLNALSKQ 118 + PTP + + +A ++ L++ P F L +++ L + Sbjct: 66 SMEPTPRAIELSTPVALALEEVRKALNQ-EGFDPMMASENFRLGMIDYASAMLMPGLVRH 124 Query: 119 IYQRYPQATIKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFS 177 + Q P+A +++ + D + + RG VD+ FS +P + LFS Sbjct: 125 MSQVAPRAKMQVVDVGGDEEVANLERGAVDLVFSR----------FQWVPPKVCINRLFS 174 Query: 178 DVPCVWLRKDHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLP 236 +HP + + ++D FL H+ D +D L E+G +R I L Sbjct: 175 MEYVAVFCPNHPGVEGGSLSMDAFLASRHVHYYPRGMDNTVVDETLAEMGEKRNIIGKLA 234 Query: 237 EFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHK 296 F M A +++ + + L + LP K + L WH Sbjct: 235 SFGMLPAMLASS-HVMAVMPEGAAKVVARPLGLRVEKLPF-------KTPLLRMALAWHP 286 Query: 297 RNSHNPKIVWLRETIKNLYAS 317 R +P VW R+ +K + Sbjct: 287 RTDRDPSHVWFRQQVKFVLKE 307 >UniRef50_A9FW21 Transcriptional regulator, LysR family n=2 Tax=Myxococcales RepID=A9FW21_SORC5 Length = 333 Score = 288 bits (738), Expect = 2e-76, Method: Composition-based stats. Identities = 83/312 (26%), Positives = 135/312 (43%), Gaps = 18/312 (5%) Query: 4 SITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLS 63 I +++LNLL L+ L+ E SV+ AA+R +V+ SA+S SLA+LR F DPL V GL+ Sbjct: 21 DIRSINLNLLPALEALLVEGSVSGAARRAHVSQSAMSHSLARLRELFGDPLLVPLGRGLT 80 Query: 64 PTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQIYQ 121 PTP + + L + L P PR F +A + L + + + Sbjct: 81 PTPRALQLRAALPAAFEHLRRALASPEPFDPRTSARTFRVATIDYFELTTLPDVLDHLGE 140 Query: 122 RYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPC 181 P +++ + D A+ G++D+ G + + L+ D Sbjct: 141 HAPFVRLEIERFSPDVTPALVLGDIDLALFGASQPVPA--------AGLRRAPLYQDPFA 192 Query: 182 VWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQS 241 V RK HPA+ + +LDT++ H+ + E A+D L LG+ R +A+ LP F + Sbjct: 193 VMARKGHPAIKRRLDLDTYVALGHVLVSVEGHRGGAVDRALARLGKTRRVALRLPHFMSA 252 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 D LL Q +L L + A P +Q +W +R+ + Sbjct: 253 PLAVRSSD-LLCTIPSSVAQRARELFGLRVFAPPFELPAAQ-------VVAVWSQRHDDD 304 Query: 302 PKIVWLRETIKN 313 P W R+ + Sbjct: 305 PAQRWFRDLFFS 316 >UniRef50_A6VUW1 Transcriptional regulator, LysR family n=2 Tax=Marinomonas RepID=A6VUW1_MARMS Length = 321 Score = 287 bits (736), Expect = 3e-76, Method: Composition-based stats. Identities = 79/313 (25%), Positives = 152/313 (48%), Gaps = 19/313 (6%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 ++ +DLNLL Q+L++E +VTKAA R+NV+ AVS+SL++LR F+DPLF+ + GLS Sbjct: 21 LSDIDLNLLYVFQVLIEELNVTKAATRLNVSQPAVSRSLSRLRDVFNDPLFIRTSHGLSA 80 Query: 65 TPLMVSMEQNLAEWMQMSNLLLDKP-HHQTPRGLKFELAAESPLMMIMLNALSKQIYQRY 123 T + LA+ ++ L+ +F L+ + +L + + Q+ Sbjct: 81 TAKTQDLAPLLADTLKGLESLIQPSEFTPQSSKRRFILSTTDFGTLTVLPKILDKFRQKA 140 Query: 124 PQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVW 183 P A + +++W+ D + + + +D+ + P P I L SD Sbjct: 141 PDAILDVKSWNEDMVAELDQTNIDVAVAVLSKEP---------PAGIRAMRLKSDRMVCL 191 Query: 184 LRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 RK+HP + L+++L+ H+ + + + +A+D L+++G +R +++ LP F + Sbjct: 192 ARKNHPRIEGKLTLESYLQVSHVQVVLGRREYFAVDRELEKMGHKRHVSVHLPNFVPAAR 251 Query: 244 MAAQPDNLLLATAPRYCQYYNQL-HQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 + D LLL + + ++ + LP E ++++WH+R H+ Sbjct: 252 VVMDSD-LLLTVPKLFAEDMAATVSEIVVHELPFA-------SREFDYSMIWHERFQHDA 303 Query: 303 KIVWLRETIKNLY 315 VW R ++ + Sbjct: 304 AHVWFRGLLRQAF 316 >UniRef50_A9AQZ4 Transcriptional regulator, LysR family n=24 Tax=Burkholderiaceae RepID=A9AQZ4_BURM1 Length = 327 Score = 286 bits (734), Expect = 5e-76, Method: Composition-based stats. Identities = 71/316 (22%), Positives = 127/316 (40%), Gaps = 22/316 (6%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 + LDLNL+ L L R+V++A + + V+ VS +L +LRA+F DPLFV + G+ P Sbjct: 20 MDALDLNLIPYLVALDDTRNVSRAGELLGVSQPRVSTALGRLRAYFGDPLFVRTSRGMEP 79 Query: 65 TPLMVSMEQNLAEWMQMSNLLLDKPHHQTPR--GLKFELAAESPLMMIMLNALSKQIYQR 122 TP +++ + + L PH P F +A ++ L L + Q Sbjct: 80 TPRALALLPAARDALAQIERGLVAPHDFDPAASTHTFSIALSDVGEIVFLPKLLQAFAQC 139 Query: 123 YPQATIKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPC 181 P A ++ + +D + + G +D+ + LF+ Sbjct: 140 APHANLRSVSLPHDEVGRGLEAGSIDLAVGYFPDLD---------GNNFFQQRLFTHRFV 190 Query: 182 VWLRKDHPA-LHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQ 240 +R+ HP + + ++ FL H + E L+ L + +R + P F Sbjct: 191 CLMRRGHPLEQARPFTVEQFLESGHAVVRAEGRSQEVLEKYLAKQRMQRRAVLETPHFMS 250 Query: 241 SLFMAAQPDNLLLATAPRYCQ-YYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 F+ ++ D L+AT P Y H + E WH++ Sbjct: 251 LPFILSRTD--LIATVPHAIGYAYAAEHAF------IVPVEPPLPLPRFDLKQHWHRKFH 302 Query: 300 HNPKIVWLRETIKNLY 315 ++P+ WLR + +L+ Sbjct: 303 NDPRTAWLRGVVASLF 318 >UniRef50_A5F4D9 Transcriptional regulator, LysR family n=68 Tax=Gammaproteobacteria RepID=A5F4D9_VIBC3 Length = 327 Score = 286 bits (732), Expect = 9e-76, Method: Composition-based stats. Identities = 99/309 (32%), Positives = 164/309 (53%), Gaps = 9/309 (2%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 + +DLNLL+CL++L++E SVT+AA R+ ++ SAVSKSLAKLR FDDPLFV + GL+ Sbjct: 20 LARIDLNLLVCLKVLIEELSVTRAAARLCLSQSAVSKSLAKLREQFDDPLFVRTSYGLNA 79 Query: 65 TPLMVSMEQNLAEWMQMSNLLLDKP-HHQTPRGLKFELAAESPLMMIMLNALSKQIYQRY 123 TP + ++ L + LL +F++AA + +++ I++ Sbjct: 80 TPKALFLKPKLDVLVNQLELLTQPAHFSPQSSEYRFQIAAVESVYPLIMPYFLPTIFRHG 139 Query: 124 PQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVW 183 P +I W + + GE+D G +G++ +L P I + ++ D Sbjct: 140 PHLSISTHAWTEQTFRKLQVGELDFGLTGKDIDINDAKLTLLPPADICEQEIYRDNQRCV 199 Query: 184 LRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 +R+ HP L WNL ++L H+ + + +D W LD L +LG ER IA+++P+F + Sbjct: 200 VRRGHPVLQYDWNLSSYLNLRHVQVRCDGNDRWLLDYRLADLGYERDIAITVPDFNSAAS 259 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 + D + TAP + ++ Q+ LV LPLP + + +TL WH+ ++P Sbjct: 260 LCTYTDFIF--TAPSHFTHWVAK-QMDLVELPLPMEFP-----PMAYTLFWHRERENDPA 311 Query: 304 IVWLRETIK 312 + WLRE I+ Sbjct: 312 LRWLRELIQ 320 >UniRef50_Q0BPL7 Transcriptional regulators, LysR family n=1 Tax=Granulibacter bethesdensis CGDNIH1 RepID=Q0BPL7_GRABC Length = 308 Score = 286 bits (732), Expect = 9e-76, Method: Composition-based stats. Identities = 76/321 (23%), Positives = 125/321 (38%), Gaps = 23/321 (7%) Query: 2 KKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLG 61 ++++ LDLNLL + ERSVTKAA+ I V SA+S +LA+LR D LFV +P G Sbjct: 5 HRNLSRLDLNLLTAFDAIYTERSVTKAAECIGVGQSAMSHNLARLREALQDELFVRTPSG 64 Query: 62 LSPTPLMVSMEQNLAEWMQMSNL--LLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQI 119 + PTP ++ + + L + + + + +++ L + Sbjct: 65 MEPTPRARAIADTVRNLLWTVQDKLLTTRSFTPATAERIWRIGLADNIESLLMPPLLDMM 124 Query: 120 YQRYPQATIK-LRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSD 178 + P I+ + L+A+ R E+D+G + + P D Sbjct: 125 LKEAPGMRIQAIFTDGLRVLEALDRDELDMGIGVFRHGGNVHKRRNFAP----------D 174 Query: 179 VPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEF 238 L LD + PH+ + D+ L LGR RTI M+ P F Sbjct: 175 SYLCLYDPKQITLEGPITLDQYASLPHVLVSLRGIFHGVADDALSLLGRTRTIVMTTPHF 234 Query: 239 EQSLFMAAQPDNLLLATAP-RYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKR 297 ++ ++ T P + H L + LP ++LWH Sbjct: 235 LSVPYVLRG--APVITTLPGTLARSAASAHGLCVSPLPFEL-------APFRLSMLWHSS 285 Query: 298 NSHNPKIVWLRETIKNLYASM 318 ++P WLR T+ +L M Sbjct: 286 YDNDPAHRWLRNTVASLMDQM 306 >UniRef50_A5V8P8 Transcriptional regulator, LysR family n=1 Tax=Sphingomonas wittichii RW1 RepID=A5V8P8_SPHWW Length = 316 Score = 286 bits (732), Expect = 1e-75, Method: Composition-based stats. Identities = 80/321 (24%), Positives = 136/321 (42%), Gaps = 14/321 (4%) Query: 1 MKKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPL 60 M S+T DLNLL+ L L+ E+SVT+AA+R+ VT AVS SLA+LR F+DPL V Sbjct: 1 MALSLTQFDLNLLVVLDALLTEKSVTRAAERLFVTQPAVSGSLARLRDIFEDPLLVRVGR 60 Query: 61 GLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGL--KFELAAESPLMMIMLNALSKQ 118 + T ++ + E + M L P +F +A M +L + ++ Sbjct: 61 EMELTVRARALAGPVREALLMVKAALGSEESFDPAETKCEFRIAMTDYCSMTILPRIVRE 120 Query: 119 IYQRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSD 178 + R P + + S D + GE+D + E R+ + S P + F D Sbjct: 121 LSARAPGIELAVEGLVNKSFDRLETGEIDFLLTVVE---RTLLMHSRHPDMLRGADAFED 177 Query: 179 VPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEF 238 + DHP + F YP+ ++ + ++ + G +++ A+ P F Sbjct: 178 CYTCVVAADHPF-DGALTPEDFRAYPNATVSFGENTFTTDRAAYEHGGLDQSPALIAPSF 236 Query: 239 EQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRN 298 LF L+ R + + + + L+ P+ ++ L WH R+ Sbjct: 237 SSLLFQLQGT-TLIGTVPNRLAEMFAPMLGVRLLEPPIRLPTLTER-------LNWHVRS 288 Query: 299 SHNPKIVWLRETIKNLYASMA 319 +P W+R I ++ SM Sbjct: 289 DADPGHSWMRNLILDVGRSMG 309 >UniRef50_A9FB16 Transcriptional regulator, LysR family n=3 Tax=Sorangium cellulosum RepID=A9FB16_SORC5 Length = 349 Score = 286 bits (732), Expect = 1e-75, Method: Composition-based stats. Identities = 74/316 (23%), Positives = 132/316 (41%), Gaps = 20/316 (6%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 + ++D +L++ L L+QERSVT+AA+R+ VT ++S +L++LRA F DPL V + Sbjct: 41 MRLPSVDTHLVVALHALLQERSVTRAARRVGVTQPSMSHALSRLRAHFGDPLLVQVGRQM 100 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTP--RGLKFELAAESPLMMIMLNALSKQIY 120 + + + AE ++ + + P F L A L +++L L++ + Sbjct: 101 TLSERARDLLPRAAEAVERLEQVFGQAERFDPRRSTRTFRLVATDNLELLVLPPLTRILA 160 Query: 121 QRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 P ++ RN D + + RGE+D +P L ++ Sbjct: 161 AEAPHVNLRCRNIPPDFAELLRRGELDAKLGRGGP----------VPDGCRSTQLAAEQL 210 Query: 181 CVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQ 240 +R+ HPA + + H+ I D +D L G R + +++ F Sbjct: 211 VCLMRRGHPASRKALTAARYAACEHLMISPHGEDHNVIDQELAARGLRRRVTLTVSHFLV 270 Query: 241 SLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 + F+ + D LLL + R + L + PL TL+W +R+ Sbjct: 271 APFILSGSD-LLLTVSARVAVALARKLDLVVRPCPLE-------ARGYTLTLVWPERSEG 322 Query: 301 NPKIVWLRETIKNLYA 316 + WLR I+ A Sbjct: 323 DEGHSWLRAAIERAVA 338 >UniRef50_B6R1K2 Transcriptional regulator, LysR family n=1 Tax=Pseudovibrio sp. JE062 RepID=B6R1K2_9RHOB Length = 293 Score = 285 bits (731), Expect = 1e-75, Method: Composition-based stats. Identities = 75/313 (23%), Positives = 134/313 (42%), Gaps = 25/313 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +DLNLLL + + ER++T+A+KR+N+T AVS +L +LR F DPLF+ + G+ PT L Sbjct: 1 MDLNLLLVFEAVYSERNLTRASKRLNLTQPAVSNALRRLRDTFQDPLFIRTADGMVPTDL 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPR--GLKFELAAESPLMMIMLNALSKQIYQRYPQ 125 + + + ++M + P F ++ M++L L K++ ++ P Sbjct: 61 AEQLAGRVLDALEMLRS-FESRESFDPAGLSRDFRISISDYNGMLVLPRLLKELAEQAPG 119 Query: 126 ATIKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 +I + + ++ G+VD+ + ++ + YE L+SD Sbjct: 120 VSITTSQIQRAHVSEHLSTGQVDLVLAPKQDV-----------ANLSYEPLYSDDYVGVA 168 Query: 185 RKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 + +L+ + + H+ E +D L +LG++R + + + Sbjct: 169 SAHYGPEGGQMSLEEYCQREHLLFSLEGYGRSTVDVALSKLGKKRKVVLRSSHVHTIPHV 228 Query: 245 AAQPDNLLLATAPRYCQY-YNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 +AT PR Y + +L +LP L WH R H+P Sbjct: 229 LEGS--AFIATLPRLITLDYLKRFELTSFSLPFEL-------KGHEVGLHWHARQHHDPA 279 Query: 304 IVWLRETIKNLYA 316 WLR IK L+A Sbjct: 280 HEWLRGLIKELFA 292 >UniRef50_Q30XG7 Conserved hypothetical transcriptional regulator, LysR family n=1 Tax=Desulfovibrio desulfuricans subsp. desulfuricans str. G20 RepID=Q30XG7_DESDG Length = 309 Score = 285 bits (731), Expect = 1e-75, Method: Composition-based stats. Identities = 82/319 (25%), Positives = 140/319 (43%), Gaps = 19/319 (5%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 I++++LNLL+ L+ L+ E +VT+AA+R+++T S +SK+LA+LR FDDPL V S L Sbjct: 1 MDISSVNLNLLVALKALLDEGNVTRAAERLHITQSGMSKNLAQLRELFDDPLLVRSGNAL 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLD-KPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQ 121 T +E L + + L + + F LA + +L I Sbjct: 61 VLTERARELEGPLEMVLGNVHALFEAQRFDPATCRRSFTLAVTDYVAQYILPDALGAILA 120 Query: 122 RYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPC 181 P I+ W+ DS+ A+ G++D+ L +P +++ + D Sbjct: 121 AAPGIDIQAIGWEPDSMRALAEGKIDMA----------TCLTEGVPASVEQLRVGEDRFA 170 Query: 182 VWLRKDHPA-LHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQ 240 +R HP LD +++ H +I +D VL +LG R I + +P + Sbjct: 171 CLMRAGHPLAAAGAMRLDRYVQADHAAITIGGDKVRIIDRVLGKLGHSRNIRLRVPFYAS 230 Query: 241 SLFMAAQPDNLLL--ATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRN 298 ++ + ++ D LL A R + L PLPF ++++WH R Sbjct: 231 AVEIVSRTDLLLTLPAHVARNVIQARNPSEPALAWAPLPFAVD-----SFEYSIIWHARF 285 Query: 299 SHNPKIVWLRETIKNLYAS 317 +P W+RE + S Sbjct: 286 HGDPGHRWVREMLFAQMQS 304 >UniRef50_A4YPA1 Putative transcriptional regulator, LysR family n=1 Tax=Bradyrhizobium sp. ORS278 RepID=A4YPA1_BRASO Length = 310 Score = 285 bits (731), Expect = 1e-75, Method: Composition-based stats. Identities = 74/318 (23%), Positives = 130/318 (40%), Gaps = 21/318 (6%) Query: 4 SITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLS 63 + +DLNLL+ + LMQ RSV++ A+R+ + + S +L +LRA DPLFV +P G+ Sbjct: 8 DLRDVDLNLLVAFEALMQTRSVSRMAQRLRIGQPSASHALKRLRALLGDPLFVRTPAGMI 67 Query: 64 PTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPR--GLKFELAAESPLMMIMLNALSKQIYQ 121 PTP +++ + + + L PR F + A + ++ + L + Sbjct: 68 PTPHALALAEPIRAILTSIERTLFARASFDPRAERRVFRIGAMDYVQAVIADPLLAVLQA 127 Query: 122 RYPQATIKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 + P + L D D+ ++ RGE+D+ + E+L+ + Sbjct: 128 QAPGCKLILTTTDCDTAGRSLARGEIDLAIGA----------FPQIKAGSHQELLYRERY 177 Query: 181 CVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQ 240 L + +L PH+ + + LD+VL+ G +R +A+S P F Sbjct: 178 ECVFDAKACRLGKRVTRAQWLALPHVIMSVHGDYSGPLDDVLKSSGEQREVAVSTPNFLA 237 Query: 241 SLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 F+ L+ A R + + L LP T++WH R Sbjct: 238 IPFLLRN-KRLIAALPSRMARAFCGRLGLSTCPLPFTAPT-------FDVTMIWHARTGD 289 Query: 301 NPKIVWLRETIKNLYASM 318 P WLR+ I + + Sbjct: 290 EPGAAWLRDQITAICRRI 307 >UniRef50_Q7W2A6 Transcriptional regulator n=3 Tax=Bordetella RepID=Q7W2A6_BORPA Length = 313 Score = 285 bits (730), Expect = 2e-75, Method: Composition-based stats. Identities = 83/315 (26%), Positives = 139/315 (44%), Gaps = 22/315 (6%) Query: 6 TTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPT 65 LDLNLL+ ++ E VT+AA+R+ ++ SAVSK LA+LR F DPLF+ + G+ PT Sbjct: 4 KHLDLNLLMIFDAILAEGHVTRAAERLAMSQSAVSKGLAQLRQAFGDPLFLRASRGVVPT 63 Query: 66 PLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQIYQRY 123 + + + + + N L R F + A + ++L L +++ + Sbjct: 64 HRALEIADQVRQAIAALNSLAGPVTEFDARSAHAHFNIGATDYVSFVLLPGLMRRLQETA 123 Query: 124 PQATIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCV 182 P ++ L + + + + G+VD+ S ++S+ I + LF D Sbjct: 124 PHVSLTLHDMESMMPEEMLLAGKVDLVISS----------VASVNFPIYRQELFRDHYVC 173 Query: 183 WLRKDHPALHQTWNLDTFLRYPH-ISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQS 241 R HPAL ++ F+ H + L + LQ LG R +A+ +P Sbjct: 174 LCRAGHPALADPVPIEQFVSSRHLAMPRQNGARERVLQDTLQRLGVTRDVAVQVPHMLAI 233 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 D L+ A R + + H L ++A PLP + P + LWH R + Sbjct: 234 PATLTATD-LVATMACRVAREFAARHPLQVLAHPLPLP-------DFPVSQLWHDRTRRS 285 Query: 302 PKIVWLRETIKNLYA 316 P WLR+T+ +L Sbjct: 286 PSHQWLRDTVYDLAR 300 >UniRef50_B0BQD1 HTH-type transcriptional activator n=15 Tax=Proteobacteria RepID=B0BQD1_ACTPJ Length = 299 Score = 284 bits (729), Expect = 2e-75, Method: Composition-based stats. Identities = 75/314 (23%), Positives = 132/314 (42%), Gaps = 24/314 (7%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 + I T+DLNLL L+QER+VTKAA+R++VT A+S L +LR F DPLFV G+ Sbjct: 2 RDIRTVDLNLLKAFDALLQERNVTKAAQRLSVTQPAMSAMLNRLRDSFGDPLFVRVQHGI 61 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDK-PHHQTPRGLKFELAAESPLMMIMLNALSKQIYQ 121 PT +++ ++ + N +L + ++A+ + + + Q Sbjct: 62 EPTARALALMPSVKTVLAEVNRMLRPVEFDPQTAEMTIKIASTDYGLEAIGTPFLSHLKQ 121 Query: 122 RYPQATIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 P+ + D D L + +DI + +P + + L ++ Sbjct: 122 LAPKIRVAFLPAQDVDLLAQFEQARIDIALVSTQH----------IPADLHSKPLLTEHY 171 Query: 181 CVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWAL-DNVLQELGRERTIAMSLPEFE 239 +R DHP +Q NLD F + ++ + + D L +LG+ R +++S+ F Sbjct: 172 VCVMRADHPMANQLLNLDNFCELDFAMMSYDGGQFYGVCDEALAKLGKTRRVSVSVNHFS 231 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 + D ++A P ++ L L LPL + WH+R Sbjct: 232 LLPNILRTTD--VVALIPSRLSHH--LTGLICKTLPLEV-------QGFSLQMAWHERTH 280 Query: 300 HNPKIVWLRETIKN 313 +P W+R + Sbjct: 281 QDPAYQWIRNLLVE 294 >UniRef50_Q13YH7 Transcriptional regulator, LysR family n=12 Tax=cellular organisms RepID=Q13YH7_BURXL Length = 317 Score = 284 bits (729), Expect = 2e-75, Method: Composition-based stats. Identities = 77/321 (23%), Positives = 136/321 (42%), Gaps = 24/321 (7%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 S+ +DLNLL Q +++ERS+T+A +R+ ++ A+S SL +LR FDDPLF+ + G+ Sbjct: 13 NSLDQVDLNLLRVFQAIVEERSLTRAGERLALSQPAISYSLGRLRTLFDDPLFIRTRAGM 72 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPR--GLKFELAAESPLMMIMLNALSKQIY 120 PTP+ + + +A + L H P F ++ + L + + ++ Sbjct: 73 QPTPIALELSAIVARALDTVREALRYAEHFDPAVSTRTFRVSLSDAGELAYLPPICEALH 132 Query: 121 QRYPQATIKLRNWD-YDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 Q+ P+ +++ + DA+ +D L +L ++ LF + Sbjct: 133 QQAPRVRLRIEPLPVEEIEDALRASRLDFAIGN----------LPTLTARTRHQALFEET 182 Query: 180 PCVWLRK--DHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPE 237 RK P + +L FL H+ I + ALD+ + G R IA+ LP Sbjct: 183 YVCMTRKRRGLPRAKE-LSLKAFLDASHVQITSVEHSHRALDDEFRTQGVGRHIALELPH 241 Query: 238 FEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKR 297 F + A D L R Q +N+ + LP+ + T+ WH+ Sbjct: 242 FVALPSVLAVTD-LFATLPRRLAQIFNRGGNFQIYELPVTLPIA-------AVTMHWHEH 293 Query: 298 NSHNPKIVWLRETIKNLYASM 318 + VWLR + ++ Sbjct: 294 FDQDEGNVWLRNLMADIVRHF 314 >UniRef50_A1WRT3 Transcriptional regulator, LysR family n=1 Tax=Verminephrobacter eiseniae EF01-2 RepID=A1WRT3_VEREI Length = 315 Score = 284 bits (729), Expect = 2e-75, Method: Composition-based stats. Identities = 75/318 (23%), Positives = 130/318 (40%), Gaps = 20/318 (6%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 ++ +LNLL + + RSV+ AA+ +++T AV+ +L KLR FD+PLFV + G+ Sbjct: 1 MDLSEFNLNLLTFFDAIYRHRSVSAAAQELDLTQPAVTAALNKLRVHFDNPLFVRTSNGM 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDK-PHHQTPRGLKFELAAESPLMMIMLNALSKQIYQ 121 PTP ++ +A + L + P +F++ MM+ L + + + Q Sbjct: 61 HPTPWADALAPKIAHVLDSVRRLDEPTPFQPQSAKNQFKIYVNDIGMMLALPKIVQLLNQ 120 Query: 122 RYPQATIKLRNWDYDS-LDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 P + + + D ++A+ GE+D+ +P + L Sbjct: 121 DAPHTQLTVIDLRQDEVVNALDVGEIDLAIGY----------FVGVPNWARQQHLRDTSY 170 Query: 181 CVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQ 240 +RKDHP++ T L +L H S LD L + G R IA+ +P Sbjct: 171 VCAMRKDHPSIGDTMTLTQYLNARHAMYWTHGSTYGRLDEALAKRGFSRDIAVRIPRLGA 230 Query: 241 SLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 F+AA D + + + L + LV +P+ WH+R Sbjct: 231 IPFLAAFSDFV-VTIPEDLGLLFRDLIPIKLVPVPISLP-------SFQVKQYWHERLHA 282 Query: 301 NPKIVWLRETIKNLYASM 318 + WLR I + + Sbjct: 283 DSAHKWLRTLILQIMKQL 300 >UniRef50_Q2IYM8 Transcriptional regulator, LysR family n=2 Tax=Rhodopseudomonas palustris RepID=Q2IYM8_RHOP2 Length = 317 Score = 284 bits (728), Expect = 3e-75, Method: Composition-based stats. Identities = 69/316 (21%), Positives = 131/316 (41%), Gaps = 21/316 (6%) Query: 4 SITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLS 63 ++ +DLNLL+ + +++ AA+++ ++ AVS +L +LR FDDPLFV + G+ Sbjct: 5 NLRNVDLNLLIVFDAVYATGNISHAARQLALSQPAVSNALTRLREHFDDPLFVRAGRGVK 64 Query: 64 PTPLMVSMEQNLAEWMQMSNLLLDKPHHQT--PRGLKFELAAESPLMMIMLNALSKQIYQ 121 PT M + + E +++ D F + PL +++ + ++I Sbjct: 65 PTLRSQQMIEPVREALRLIRQQFDGDRSLDLGSYKRTFRIVIVDPLEAMLMPTMLREISA 124 Query: 122 RYPQATIKLR-NWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 PQ TI+ R W+ + DAI G +D+ + P Sbjct: 125 HAPQVTIESRPPWNTNVADAIIAGTLDLACYTFPVSAPGLVFKTICPCDH---------- 174 Query: 181 CVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQ 240 + R+ HP + T + +TFL +++ E +D + G R IA + + Sbjct: 175 VIVARRGHPKIGATLDAETFLSLAQVALIPELRGHTNIDRDITTRGGNRRIAYMVNKVWS 234 Query: 241 SLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 + D L+ R+ + L + P+P + ++WH++N+ Sbjct: 235 MPGVVGSTD-LVTVMPRRFAELMAPKFGLQIFESPIPI-------SPQDYHMIWHEKNTD 286 Query: 301 NPKIVWLRETIKNLYA 316 +P WLR+T+ Sbjct: 287 DPGHKWLRDTMVKAMQ 302 >UniRef50_B2JSH4 Transcriptional regulator, LysR family n=2 Tax=Burkholderiaceae RepID=B2JSH4_BURP8 Length = 309 Score = 284 bits (727), Expect = 3e-75, Method: Composition-based stats. Identities = 60/315 (19%), Positives = 114/315 (36%), Gaps = 20/315 (6%) Query: 4 SITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLS 63 + DLNLL L + + KAA+ + ++ A S +L +LR D LFV + G+ Sbjct: 7 HMDNFDLNLLRIFDALWRHGHLGKAAEELTLSQPAASYALKRLREELGDVLFVKTGSGMQ 66 Query: 64 PTPLMVSMEQNLAEWMQMSNLLL--DKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQ 121 PTP + + + + + F +A M+ L L +++ Sbjct: 67 PTPRAILLAPVVQSVLADIRERVLKAPNFVPDKAQRTFTIALSDVGEMVSLPRLLQRVTS 126 Query: 122 RYPQATIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 P + ++ L ++ R EVD+ + + L Sbjct: 127 LAPSVNVTTVSFAPKQLLSSLQRSEVDLAIGYFPDLDGV---------DVFQQHLVRHSF 177 Query: 181 CVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQ 240 +R++HPA+ F PH + E ++ L+E G R + P F Sbjct: 178 VCLVRQNHPAVQGRLTKKLFCELPHAVVQVEGRRQEIVEQFLKENGIRRREVLHTPHFLS 237 Query: 241 SLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 A D L++ + + + ++ +L ++ P K WH+ Sbjct: 238 IPMTIAMTD-LVVTVSSDVGEIFARIAELEILDPP-------YKMPRFDVNQYWHRSQHD 289 Query: 301 NPKIVWLRETIKNLY 315 +P W+R ++ L+ Sbjct: 290 DPGNRWMRGLVRELF 304 >UniRef50_D0LKM3 Transcriptional regulator, LysR family n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LKM3_HALO1 Length = 307 Score = 284 bits (727), Expect = 3e-75, Method: Composition-based stats. Identities = 77/312 (24%), Positives = 127/312 (40%), Gaps = 22/312 (7%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 ++ ++LNLL+ L L+ ERSV++AA+R V+ A+S+SL +LRA FDD L L Sbjct: 6 LSEINLNLLVSLDALLTERSVSRAARRTGVSQPAMSQSLRQLRAIFDDALLARDRGVLVL 65 Query: 65 TPLMVSMEQNLAEWMQMSNLLLDKPHHQTP--RGLKFELAAESPLMMIMLNALSKQIYQR 122 TP + L + +LD P +F +A + +L L ++ + Sbjct: 66 TPAAERLMVPLRHALVAVQRVLDGEKPFDPGRAERRFTIAVGDFAAVTLLPPLLERASRE 125 Query: 123 YPQATIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPC 181 P +R + + + GE D+ + ++L+ D Sbjct: 126 APGIGFDVRPAEPTRLFERLATGEFDLVIGAKL----------DASGDFMRQLLYRDGFV 175 Query: 182 VWLRKDHP-ALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQ 240 R+DHP +L+ + PH+ I +D +L E G++R IA+ +P F Sbjct: 176 CMARRDHPELSGDALDLERYAALPHVLISPTGEGPSVVDRLLAERGKQRRIALRIPYFLA 235 Query: 241 SLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 + M + D +L A + H L L PL LWH+R Sbjct: 236 APLMVVRSDLVLTA-PRSVAGAFASTHALALFEPPLELP-------SFGVYQLWHQRYQS 287 Query: 301 NPKIVWLRETIK 312 + WLRE + Sbjct: 288 DDAHRWLRELVA 299 >UniRef50_Q08NF6 Transcriptional Regulator, LysR family n=1 Tax=Stigmatella aurantiaca DW4/3-1 RepID=Q08NF6_STIAU Length = 322 Score = 284 bits (727), Expect = 4e-75, Method: Composition-based stats. Identities = 74/317 (23%), Positives = 138/317 (43%), Gaps = 21/317 (6%) Query: 4 SITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLS 63 ++++D NLL+ L L+QE V +A+KR+ ++PSA S +LA+LR D L V + L Sbjct: 14 QLSSIDTNLLVVLDALLQEGHVGRASKRVALSPSATSHALARLRELLGDELLVRAGRQLV 73 Query: 64 PTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPR--GLKFELAAESPLMMIMLNALSKQIYQ 121 TP +++ + + M+ +L P F + + ++L L + + Sbjct: 74 LTPRAIALAPQVRQLMEQMERILRPAESFHPAKLEHTFRVLTTDHIEFVLLRPLDRFLTD 133 Query: 122 RYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPC 181 P+ + R D+++ + G D+ F + + LP I + LF D Sbjct: 134 EAPRVILHNRPMVPDAVEELRGGRADLAFG----------VFTDLPDDISSQELFKDRFV 183 Query: 182 VWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQS 241 +R+ HP L + L F H+ + + T +D +L E +R + +L F + Sbjct: 184 TLVREGHPVLARPLTLKRFAELDHVLVAPRGTATSRMDLLLAERNLKRRVVRTLGSFLSA 243 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 F AQ D+ + + R L L ++ P+ ++ T +WH+R + Sbjct: 244 PFFVAQSDH-AVTLSARIADALAPLLGLRVLEPPIAYE--------YTLTQIWHRRWDAD 294 Query: 302 PKIVWLRETIKNLYASM 318 P WLR+ + + + Sbjct: 295 PAHAWLRQLTARVASGL 311 >UniRef50_A3Y808 Transcriptional regulator, LysR family protien n=1 Tax=Marinomonas sp. MED121 RepID=A3Y808_9GAMM Length = 301 Score = 283 bits (726), Expect = 4e-75, Method: Composition-based stats. Identities = 71/315 (22%), Positives = 129/315 (40%), Gaps = 19/315 (6%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 + +DLNLL+ L + +SV+ AA + ++ SA S +A+LR F+D LFV + Sbjct: 1 MDLHQIDLNLLILFDALYRHQSVSLAADEVCISQSAFSHGIARLRKRFNDELFVRVNNQM 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPR--GLKFELAAESPLMMIMLNALSKQIY 120 PTP + Q+L + + + ++ H +F+++A +L L Q+ Sbjct: 61 QPTPRAEEIAQHLHQALPFIHNAINDSDHFDASMDKTEFKISATDYTEFSLLPKLVGQVS 120 Query: 121 QRYPQATIKLR-NWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 + P + + L + EVD S I++ SD Sbjct: 121 HQAPNIKLTVIGAKAPQPLTHLENNEVDFALGFSHEIEASSL--------IEHHTWLSDS 172 Query: 180 PCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFE 239 C RK+HPAL Q +LDTFL H+ + +D VL + +R +++ LP Sbjct: 173 YCTVARKNHPALTQGLDLDTFLELKHVRVSPWGEKQGIVDQVLAQHKLKRHVSLQLPSVL 232 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 + D L+L + + ++ + P+ + + WHK N+ Sbjct: 233 VAPHSIIHSD-LILTMPRIVAEQVAKQVEIEIFTPPISIP-------DYHLNIYWHKINA 284 Query: 300 HNPKIVWLRETIKNL 314 W+++ ++L Sbjct: 285 DKASFKWMKQLFQSL 299 >UniRef50_B7WQP0 Transcriptional regulator, LysR family n=1 Tax=Comamonas testosteroni KF-1 RepID=B7WQP0_COMTE Length = 295 Score = 283 bits (726), Expect = 5e-75, Method: Composition-based stats. Identities = 68/310 (21%), Positives = 126/310 (40%), Gaps = 20/310 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +D+ LL + + RSV++A + + + ++VS +L +LR F+D LFV + G+ PTP Sbjct: 1 MDMKLLSVFDEIYKTRSVSRAGENLGLAQTSVSLALGRLRRAFNDQLFVRTSEGMLPTPR 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPR--GLKFELAAESPLMMIMLNALSKQIYQRYPQ 125 ++ L + +++ + P F LA + L AL ++ P+ Sbjct: 61 AAALVPQLRQALELLQSATRQQAEFDPASSSRAFRLAMTDISHLEFLPALMNKLGNIAPK 120 Query: 126 ATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 +++ D+ + G+ D+ + L + LF D +R Sbjct: 121 VRVEVLRITADTARLLEAGDADLAIGY----------MPELDAGFYQQKLFRDGFACVVR 170 Query: 186 KDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMA 245 + HP + + F H+ I + ++ L+ G +R +A+SLP + Sbjct: 171 RTHPRIDDNLTMTRFKTERHVIITAPGTGNEIVEQELKRQGAQRNVALSLPTLPGVGNLL 230 Query: 246 AQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIV 305 A D L+ R Q ++ Q+ +A P E WH+R +P Sbjct: 231 AHTD-LIATVPHRIAQTLVKIAQVKAIASPYRLP-------EFAIKQHWHERYQQDPANR 282 Query: 306 WLRETIKNLY 315 WLR T+ L+ Sbjct: 283 WLRSTLAELF 292 >UniRef50_C9NXV6 Transcriptional regulator LysR family n=1 Tax=Vibrio coralliilyticus ATCC BAA-450 RepID=C9NXV6_9VIBR Length = 303 Score = 283 bits (726), Expect = 5e-75, Method: Composition-based stats. Identities = 70/317 (22%), Positives = 127/317 (40%), Gaps = 21/317 (6%) Query: 4 SITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLS 63 +I+ ++L+ L LQ++ + +++T+A +R +T SAVS +L KLR F+D L + + Sbjct: 3 NISDIELSQLRLLQIIFETKNLTQAGERAGLTQSAVSHTLKKLRHSFNDSLVIRQGNKMV 62 Query: 64 PTPLMVSMEQNLAEWMQMSNL--LLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQ 121 TP S++ +L W+ L + F +A + I+ LS+ + Sbjct: 63 LTPRAESLQTSLGRWLNDFERNILFQEVFDPLTSDRTFYIATSDLVEHILAPHLSRHFGR 122 Query: 122 RYPQATIKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 P I R + +L I GEVD S ++ S + L+ D Sbjct: 123 IAPNIRIVFRKIEKRALASQIESGEVDFAIS----------VIDSTHPNLMVRTLYRDDF 172 Query: 181 CVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQ 240 +R HP L+ F +YPH+ + +D+ L+ LG R + + F Sbjct: 173 VSVVRAGHPLLNSKIKAKDFCQYPHVLASTGNDNRGMVDDALEGLGLSRVMQYKVANFSS 232 Query: 241 SLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 + ++ D +L A + + P+ + + WH +N Sbjct: 233 APYIVESSDAILTA-PRTFVDLIAGKFNVSSFTPPVELE-------SYAMKMYWHIKNKD 284 Query: 301 NPKIVWLRETIKNLYAS 317 + W RE I + A+ Sbjct: 285 DQANRWFREQIAEITAA 301 >UniRef50_Q8YZV2 Transcriptional regulator n=2 Tax=Nostocaceae RepID=Q8YZV2_ANASP Length = 305 Score = 283 bits (725), Expect = 6e-75, Method: Composition-based stats. Identities = 70/319 (21%), Positives = 134/319 (42%), Gaps = 22/319 (6%) Query: 4 SITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLS 63 ++++DLNLL+ ++L +ERSVT AA+R+ + A+S +LA+LR F D LF+ + Sbjct: 5 DLSSIDLNLLVTFEVLFEERSVTAAAQRLYLGQPAMSAALARLRILFQDELFIRIGREMQ 64 Query: 64 PTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQIYQ 121 PT + + ++ +Q L+ P F + + ++L L + Q Sbjct: 65 PTAKALEISPGISVALQQIRQTLESSQTFDPTTSKHTFAIGSSDYTSYVVLPKLLEVCRQ 124 Query: 122 RYPQATIKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 P +L ++ DS+ D + + E+ + L + P LF + Sbjct: 125 VAPSIDFRLIGFEKDSVGDLLEQREIHVALG----------LFQNPPRQTRQMPLFEEHF 174 Query: 181 CVWLRKDHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFE 239 R+ HP + ++ +TF R P + D +D VL + +R + ++ P Sbjct: 175 VGLCRRGHPVVTQESMTPETFARLPQALFTLRRDDIGEIDKVLAQYNLQRRVVLTTPHLL 234 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 + + D L+ R + L + LP+ K ++LW K Sbjct: 235 ILPTVISSSD-LVTVIPSRLLTPFAYKDTLEIFELPV-------KTEPWMISMLWSKLTD 286 Query: 300 HNPKIVWLRETIKNLYASM 318 + +WLR+ +K++ + Sbjct: 287 QDQASIWLRQMLKSVCEGI 305 >UniRef50_Q13QG3 Transcriptional regulator, LysR family n=9 Tax=Proteobacteria RepID=Q13QG3_BURXL Length = 316 Score = 283 bits (725), Expect = 6e-75, Method: Composition-based stats. Identities = 71/314 (22%), Positives = 125/314 (39%), Gaps = 21/314 (6%) Query: 9 DLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLM 68 DLNLL + RS+T A +R+ +T AVS +L +LRA FDDPLFV +P G+ PT Sbjct: 10 DLNLLRVFLAISDLRSLTAAGERLGLTQPAVSHALRRLRALFDDPLFVRTPTGMVPTDAA 69 Query: 69 VSMEQNLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + + L + + N+ + + P F ++ L L + + Sbjct: 70 LRLHAPLTQAFGIINVAVQQIARFDPATAQRVFRVSMSDMSEFYFLPPLLSMLDRSARGI 129 Query: 127 TIKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 +++ N DS+ A+ GE+D+ + L + LF D +R Sbjct: 130 RLEIANVSVDSVSSAMRSGEIDLALGY----------VPGLDTGCVSKTLFVDEHVCVVR 179 Query: 186 KDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMA 245 HP Q + ++ + ++ L+EL R I + LP F + + Sbjct: 180 AGHPLRKQKPTKEDLANLRYVYASTNATGHRMVEQWLEELNLRRDIVLRLPHFVVAPEIV 239 Query: 246 AQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIV 305 D ++ Q +N+ ++ LP + + H + S +P I Sbjct: 240 QHTDLAMI-FPRSIAQRFNRNKAFRILPLPFALP-------PIEIQVHSHSQFSADPGIA 291 Query: 306 WLRETIKNLYASMA 319 WL + I +++ A Sbjct: 292 WLLDAIYDMFHQPA 305 >UniRef50_A6EYC4 LysR family regulatory protein n=1 Tax=Marinobacter algicola DG893 RepID=A6EYC4_9ALTE Length = 300 Score = 283 bits (724), Expect = 8e-75, Method: Composition-based stats. Identities = 69/319 (21%), Positives = 136/319 (42%), Gaps = 21/319 (6%) Query: 1 MKKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPL 60 MK ++ ++DLNLL +M+ +++AA + ++ A+S +L +LR DPLFV + Sbjct: 1 MKLNLRSVDLNLLPVFDAIMEAGQLSRAADSLGMSQPAISAALQRLRHTLGDPLFVRTHQ 60 Query: 61 GLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTP--RGLKFELAAESPLMMIMLNALSKQ 118 G+ PTP + ++L++ + LD + P +F + + M++L L + Sbjct: 61 GMVPTPRARELHRSLSQQLGAMRDTLDPANRFVPGTSQRRFRVLSNDYFEMVVLPTLLTR 120 Query: 119 IYQRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSD 178 + P +++ D + E D+ + ++ + +VL ++ Sbjct: 121 LRSEAPNVVVEVALAGDDMPQRLYTAEADLAV----------DAFATENDRLRRQVLLAE 170 Query: 179 VPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEF 238 V RKDHP L + FL H+ + +++ LD +L E G +R + +F Sbjct: 171 RLAVVARKDHPDLWDDCSKQQFLDAEHVVL-PDRNRRLPLDQILNEPGWQRRTGARVTQF 229 Query: 239 EQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRN 298 L ++ D + R Q Y + L + P+ +P LLW Sbjct: 230 ASMLATCSRSDMIA-TVPERLAQQYARAFGLKTLPFPVEVP-------PLPVYLLWAPVM 281 Query: 299 SHNPKIVWLRETIKNLYAS 317 ++P +W R+ + ++ Sbjct: 282 DNDPAHIWFRQRLMESVST 300 >UniRef50_Q1XGL2 Transcriptional activator NahR n=3 Tax=root RepID=Q1XGL2_PSEPU Length = 374 Score = 282 bits (723), Expect = 1e-74, Method: Composition-based stats. Identities = 68/298 (22%), Positives = 112/298 (37%), Gaps = 21/298 (7%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 + LDLNLL+ L+ +R V+ A+ + +T AVS +L +LR DPLFV + G+ Sbjct: 1 MELRDLDLNLLVVFNQLLVDRRVSITAENLGLTQPAVSNALKRLRTSLQDPLFVRTHQGM 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTP--RGLKFELAAESPLMMIMLNALSKQIY 120 PTP + + + M L P F LA + + L + Sbjct: 61 EPTPYAAHLAEPVTSAMHALRNALQHHESFDPLTSERTFTLAMTDIGEIYFMPRLMDVLA 120 Query: 121 QRYPQATIK-LRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 + P I +R+ + A+ G VD+ LL +L L + Sbjct: 121 HQAPNCVISTVRDSSMSLMQALQNGTVDLAVG----------LLPNLQTGFFQRRLLQNH 170 Query: 180 PCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFE 239 RKDHP + L+ F Y H+ + + +D + +G R I + +P F Sbjct: 171 YVCLCRKDHPVTREPLTLERFCSYGHVRVIAAGTGHGEVDTYMTRVGIRRDIRLEVPHFA 230 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKR 297 + + D LL R + L + P+ E+ + WH + Sbjct: 231 AVGHILQRTD-LLATVPIRLADCCVEPFGLSALPHPVVLP-------EIAINMFWHAK 280 >UniRef50_C4UEX0 Lys-R type regulatory protein n=1 Tax=Yersinia ruckeri ATCC 29473 RepID=C4UEX0_YERRU Length = 299 Score = 282 bits (723), Expect = 1e-74, Method: Composition-based stats. Identities = 73/316 (23%), Positives = 130/316 (41%), Gaps = 21/316 (6%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 S+ +DLNLL+ L +L+ ER V++AAKR+ ++ AVS +L +LR DD L V G Sbjct: 2 NSLRAIDLNLLVILDVLLSERHVSRAAKRLYMSQPAVSHALNRLRYLLDDELLVRVAGGF 61 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLD-KPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQ 121 T ++ + L E ++ ++ +F +A ++L L +++ Q Sbjct: 62 QLTRRAAALIEPLKEVLEKVRYIIGTGNFEPALATQRFRIALSDYGAAMVLPGLLQRLRQ 121 Query: 122 RYPQATIKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 + P + + + + + + G++D+ + LP + LF + Sbjct: 122 QAPGIDLVVEQASREQMIEQVMAGQLDLALG----------VFPDLPADMTASRLFEEHF 171 Query: 181 CVWLRKDHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFE 239 + + +P + + LD +L PH+ + ++ L ELG R +A +P F Sbjct: 172 VCVIDQANPLARKKYFTLDDYLVQPHLLVSMRGESVGEVETALAELGVRRRVAAIMPHFL 231 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 + A D LLL A R + L + LP F +WH RN Sbjct: 232 LAPQALAGTD-LLLTVASRVVTIQQESMNLQRLTLPFTVP-------NFDFVQIWHNRNH 283 Query: 300 HNPKIVWLRETIKNLY 315 WLR+ + Sbjct: 284 GKEDHRWLRQQVAESC 299 >UniRef50_Q1GMN1 Transcriptional regulator, LysR family n=1 Tax=Ruegeria sp. TM1040 RepID=Q1GMN1_SILST Length = 319 Score = 281 bits (721), Expect = 2e-74, Method: Composition-based stats. Identities = 71/324 (21%), Positives = 128/324 (39%), Gaps = 29/324 (8%) Query: 1 MK-KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSP 59 M K++ +DLNLL L ERSVTKAA + ++ AVS +L +LR DD LF+ S Sbjct: 7 MHQKNLNAIDLNLLKVFSALAAERSVTKAANSVGLSQPAVSHALRRLRDLMDDELFIRST 66 Query: 60 LGLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPR--GLKFELAAESPLMMIMLNALSK 117 G+ PT + + ++M + P + L +++ L+ Sbjct: 67 DGMQPTERCRELAPAIDASLKMLQDAMTVKDDNDPANLRATYRLGMNDLFSTLLVPGLTA 126 Query: 118 QIYQRYPQATIKLRNW------DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAID 171 ++ ++ P +++ + D+ + RG +D+ P D Sbjct: 127 RVAKQAPNVSLRFLHSMAINQNVDDAYSDLERGRIDLTVIQDF----------DTPSRFD 176 Query: 172 YEVLFSDVPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTI 231 E+L + R HP +++ + HI ++ +D L ++G R I Sbjct: 177 RELLGASEFVCVARAGHPVFQPGLSMEQYTSLGHIMFTTLDAEYSRIDEALSKMGIRRRI 236 Query: 232 AMSLPEFEQSLFMAAQPDNLLLATAPRYCQYYN-QLHQLPLVALPLPFDESQQKKLEVPF 290 + +P + +L A D L+ T PR + Q L + LP + Sbjct: 237 ELRVPHYSAALSATALTD--LVYTVPRILAQHAEQAFGLQVSELPFEAPVRK-------I 287 Query: 291 TLLWHKRNSHNPKIVWLRETIKNL 314 +WHK + + WLR + ++ Sbjct: 288 FQVWHKTRTKDFGHQWLRNVVSDV 311 >UniRef50_B0C7Y6 Transcriptional regulator, LysR family n=1 Tax=Acaryochloris marina MBIC11017 RepID=B0C7Y6_ACAM1 Length = 305 Score = 281 bits (720), Expect = 2e-74, Method: Composition-based stats. Identities = 75/315 (23%), Positives = 134/315 (42%), Gaps = 20/315 (6%) Query: 6 TTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPT 65 +DLNLL + +M E +V++AA+R+N+T AVS +L +LR +D LF+ P G+SPT Sbjct: 3 NQIDLNLLHIFEAVMMELNVSRAAERLNMTQPAVSHALRRLRRITNDELFLKVPSGVSPT 62 Query: 66 PLMVSMEQNLAEWMQMSNLLLDKP-HHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYP 124 P + + + E + L L P F LA + + L L + P Sbjct: 63 PKALELWGPIREGLVHIRLALSPPSFEPFSSMQTFTLAMADYSVALFLPKLLPILAHSAP 122 Query: 125 QATIKLRN-WDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVW 183 I++ + ++ + + E+D+ + + + D Sbjct: 123 NINIRIVPNTNINAAKLLEQSEIDLAMGRFYRSTVR----------LRVQEIIGDRYICI 172 Query: 184 LRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 +RKDHP H+ L +++ H+ + T +D L+E+ R IA+++ +F Sbjct: 173 MRKDHPLAHKRLTLKQYIKADHLLVTLTGEATGLVDKQLREMDLSRRIALTVNQFTLVPE 232 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 + A D L+ A R + L + LPL K ++WH+R+ +P Sbjct: 233 LIAGSD-LISAIPLRMVERNPFRTDLHITELPL-------KIAPAFLQMMWHERSQVDPA 284 Query: 304 IVWLRETIKNLYASM 318 WLR + + + Sbjct: 285 HEWLRSQLFEIVQDL 299 >UniRef50_Q2G901 Transcriptional regulator, LysR family n=2 Tax=Alphaproteobacteria RepID=Q2G901_NOVAD Length = 302 Score = 281 bits (719), Expect = 3e-74, Method: Composition-based stats. Identities = 68/320 (21%), Positives = 132/320 (41%), Gaps = 21/320 (6%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 LDLNLL+ LM+ RSVT+AA+RI +T A S +L +LR +F D + V + Sbjct: 1 MRFKGLDLNLLVVFDALMETRSVTRAAERIGLTQPATSAALRRLRDYFRDEIVVAVGKRM 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTP--RGLKFELAAESPLMMIMLNALSKQIY 120 PTP ++ + + ++ + P P +F + +M+ +L L ++ Sbjct: 61 HPTPFAEALHPQIQQALRRVERAISMPTEFDPSTSTRRFRIIGSDYIMVAVLVPLIERFA 120 Query: 121 QRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 + P I++ + S+ + G D+ + EVLF + Sbjct: 121 RTAPGVRIEIIQPNEHSVAELEAGRADLLVTPEPFLAS----------WHPSEVLFDEEQ 170 Query: 181 CVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWAL-DNVLQELGRERTIAMSLPEFE 239 V +P + D F H+++ + + T A D+ L +GRER + +++ F Sbjct: 171 VVVGWAQNPIFARGVTADDFYAAGHVTVAFGANRTPAFADSALSRMGRERRVEVTVGSFA 230 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 + + L + R + + L +P F Q+ + +H+ + Sbjct: 231 SAPWFIEGTSRLAV-LHERLVRQIARRFNLAWARMPFDFPTMQEM-------MQFHEARA 282 Query: 300 HNPKIVWLRETIKNLYASMA 319 + + WLR+ ++ + + A Sbjct: 283 EDAGLAWLRQQMREVASENA 302 >UniRef50_Q89IY7 Transcriptional regulatory protein n=1 Tax=Bradyrhizobium japonicum RepID=Q89IY7_BRAJA Length = 307 Score = 281 bits (719), Expect = 3e-74, Method: Composition-based stats. Identities = 84/320 (26%), Positives = 138/320 (43%), Gaps = 18/320 (5%) Query: 1 MKKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPL 60 M S LDLNLL + LM E SVT+AA + +T AVS +LA+LR DPLFV S Sbjct: 1 MFVSFRALDLNLLKVFEALMTEGSVTRAASALTMTQPAVSNALARLRDALGDPLFVRSGT 60 Query: 61 GLSPTPLMVSMEQNLAEWMQMSNLLLDKP-HHQTPRGLKFELAAESPLMMIMLNALSKQI 119 G+ PT V + + + E ++ LD+ +F L+ + +++ L + Sbjct: 61 GIRPTQRAVVLWEPIGEALESVRGALDEQVFDPARAQTEFSLSMSDYVSSLVMPDLLGHL 120 Query: 120 YQRYPQATIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSD 178 + P+A + + D + VD S + + P AI L++ Sbjct: 121 GKVAPKARVHTVPNTILEIADQLEDNRVDCVMSVYVNEAQQ-------PAAIRSRSLWTV 173 Query: 179 VPCVWLRKDHPALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPE 237 ++R+ HP + + TFL H+ + + D L G R + ++ Sbjct: 174 DYACFMRRGHPLAGMKRLSTRTFLNAGHVDVSLAGKTMPSYDLFLASRGLSRNLVATVNH 233 Query: 238 FEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKR 297 + + + Q D L+A P + ++ L L A+PLP + +L WH+R Sbjct: 234 YSAAYEVVRQSD--LIAVLPSDLRSQSRHAPL-LHAMPLPLQAPPRI-----VSLFWHQR 285 Query: 298 NSHNPKIVWLRETIKNLYAS 317 N P WLRET+ ++A Sbjct: 286 NDTVPAQRWLRETLVEMFAR 305 >UniRef50_A9CLK9 Transcriptional regulator, LysR family n=2 Tax=Alphaproteobacteria RepID=A9CLK9_AGRT5 Length = 325 Score = 280 bits (717), Expect = 5e-74, Method: Composition-based stats. Identities = 82/317 (25%), Positives = 133/317 (41%), Gaps = 22/317 (6%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 ++ +DLNLL+ L ER+VT+A RI T A+S +L++LR D LFV P GL Sbjct: 8 MNLHGIDLNLLVAFDALNSERNVTRAGSRIGRTQPAMSAALSRLRFLLRDELFVRGPNGL 67 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGLK--FELAAESPLMMIMLNALSKQIY 120 PTP V + + ++ ++ L P F +A + ++L L + Sbjct: 68 QPTPRAVELAEPISLALREIQRTLQFTQGFDPDKSTISFSIAVSAHAGSVILPRLLSLLE 127 Query: 121 QRYPQATIKLRNWDY--DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSD 178 ++ P IK+R++ D++ + G VD+ + I LF + Sbjct: 128 EKAPGIDIKVRDYSSRDDAVSLLDSGGVDLTVGIPPTPTSR----------ILSARLFQE 177 Query: 179 VPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEF 238 LRKDHP L + ++ +TFL HI + + D L R A+++P Sbjct: 178 RFVCILRKDHPILGRPFDPETFLSLTHILVAPDNEGLDVADAALASKNFRRRAAVTIPHM 237 Query: 239 EQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRN 298 + + A D + + +L + PLP VPF L WH+RN Sbjct: 238 HVAPALVASSDMVA-TVIESVVAHSGFAERLAVFDFPLPL-------NPVPFVLSWHRRN 289 Query: 299 SHNPKIVWLRETIKNLY 315 +P WLR + + Sbjct: 290 DGHPAQQWLRNGLLAAF 306 >UniRef50_A0KKG7 HTH-type transcriptional regulator YidZ n=3 Tax=Aeromonas RepID=A0KKG7_AERHH Length = 324 Score = 279 bits (716), Expect = 6e-74, Method: Composition-based stats. Identities = 156/312 (50%), Positives = 214/312 (68%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 + + LDLNLL+ +LL+QERSVTKAAK++NVT VSK+LA+LR WFDDPLF+ + GL Sbjct: 2 RPLIDLDLNLLVVFRLLLQERSVTKAAKKLNVTAPTVSKALARLRDWFDDPLFLRTQRGL 61 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQR 122 PT L +++E+ L EW Q+S + + P G F L ESP + LN L IY+ Sbjct: 62 EPTNLSLTLEEELKEWFQLSGNIASLCGNAIPAGAAFRLVLESPFYISFLNDLPMVIYET 121 Query: 123 YPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCV 182 Y ++TI++ NWD+ SL+ I G+ D+GF RE+HP S ++ LP ID+EVLF D P V Sbjct: 122 YRKSTIRIMNWDHHSLNDIINGDADLGFCARETHPSSLARVNRLPYYIDHEVLFEDRPMV 181 Query: 183 WLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 +LRKDHP L +TWNLD FL YPH+S+ WE SD WALD++L + G R + + + FEQ+L Sbjct: 182 FLRKDHPLLARTWNLDNFLAYPHVSVVWEASDAWALDSLLDDEGLSRQVPIRVSSFEQAL 241 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 +AAQ D+ L+A P YC Y + H L++LPLP DE+ ++L++ F LLWHKRN+HN Sbjct: 242 HIAAQSDHELIAVVPSYCASYARQHHNNLISLPLPLDEALYRQLDIAFILLWHKRNNHNT 301 Query: 303 KIVWLRETIKNL 314 K++WLR+ IK L Sbjct: 302 KVLWLRDEIKRL 313 >UniRef50_Q39AY8 Transcriptional regulator, LysR family n=1 Tax=Burkholderia sp. 383 RepID=Q39AY8_BURS3 Length = 331 Score = 279 bits (716), Expect = 6e-74, Method: Composition-based stats. Identities = 70/322 (21%), Positives = 121/322 (37%), Gaps = 25/322 (7%) Query: 4 SITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLS 63 + +DLNLLL +L + RS T+AA +++T +VS +L +LR FDD LFV + G+ Sbjct: 22 DLRNIDLNLLLVFDVLYRTRSTTRAADALHLTQPSVSNALKRLRTLFDDALFVKTADGMQ 81 Query: 64 PTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPR--GLKFELAAESPLMMIMLNALSKQIYQ 121 PTP ++ + E + L P F L I + L + + Sbjct: 82 PTPRADAIAARVDEGLASLRTALQAGRAFDPATSTRTFRLYTSDLGQAIFMPPLVAHLRR 141 Query: 122 RYPQATIKLRNWDYDSLDAITR-GEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 P I + D+ + + G++D+ + + L + LF + Sbjct: 142 VAPGIRIVTADPPLDAAQQMMKLGQIDLALG----------MFTGLHADFHQQRLFHETY 191 Query: 181 CVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQEL----GRERTIAMSLP 236 +R DHP + T + F H+S + L L G R + + L Sbjct: 192 VALVRNDHPMIGATLTAEQFFAADHVSYTPTAGSHAHFEAALYALSPHAGSTRHVVLQLA 251 Query: 237 EFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHK 296 + + D L+ R + +L + V+LP WH+ Sbjct: 252 HSFGLERIVSSSD-LIACIPSRLARELARLQDVRAVSLPF-------DTAPADIAQFWHE 303 Query: 297 RNSHNPKIVWLRETIKNLYASM 318 R + WLR + +L+ + Sbjct: 304 RYQRDEGHQWLRTLVYDLFHDL 325 >UniRef50_Q393U0 Transcriptional regulator, LysR family n=6 Tax=Burkholderiales RepID=Q393U0_BURS3 Length = 310 Score = 278 bits (713), Expect = 1e-73, Method: Composition-based stats. Identities = 75/319 (23%), Positives = 141/319 (44%), Gaps = 22/319 (6%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 ++ ++DLNLL+ L L+ E+ VT+AA ++ ++ SA+S +L +LR D L + + G+ Sbjct: 1 MNLRSVDLNLLVALDALLTEKHVTRAATKVGLSQSAMSSALGRLRILMRDELLIRNATGM 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQIY 120 PTP + +E+ L + + + LL+ P F L L +++ L Q+ Sbjct: 61 EPTPRALELEEPLRQLLHQAERLLESDGAFDPATTAGHFRLRMSDVLEYLLMPPLLAQLE 120 Query: 121 QRYPQATIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 Q P T+ + + ++ A+ ++D+ S H + + + LF D Sbjct: 121 QEAPGVTLDVVHLSPGQTVTALEADDIDVAVSMDLEHAGAVQAMP----------LFDDR 170 Query: 180 PCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFE 239 + +DHP + LD FL PH+ + +D +D L + R R + +++P + Sbjct: 171 MVCVMARDHPCAAEALTLDLFLSLPHLKVSISSTDGRYVDAKLAGMRRARNVVLNVPHWL 230 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 + + + + R + + L L ALP +++ WH+R+ Sbjct: 231 VVPHLLRHSSMVAV-MSARLAERFA-ADGLVLKALPFE-------SAGFHWSMYWHRRHD 281 Query: 300 HNPKIVWLRETIKNLYASM 318 P WLRE I+ M Sbjct: 282 SVPAQAWLREKIREAAEPM 300 >UniRef50_A8GG55 Transcriptional regulator, LysR family n=1 Tax=Serratia proteamaculans 568 RepID=A8GG55_SERP5 Length = 310 Score = 278 bits (713), Expect = 2e-73, Method: Composition-based stats. Identities = 77/319 (24%), Positives = 134/319 (42%), Gaps = 23/319 (7%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 +++ +DLNLL+ + L Q R+VT A +R+N +VS +LA+LR FDDPLFV S G+ Sbjct: 1 MNLSNVDLNLLVVFEALYQTRNVTVAGQRLNRAQPSVSNALARLRTLFDDPLFVRSGGGM 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG---LKFELAAESPLMMIMLNALSKQI 119 PT + + ++ + L P P +F LAA + +L + ++ Sbjct: 61 LPTARAHQLMLQIQPVLEQIHQALTPPTRFDPATASQRRFRLAAGDYADITLLPTIISRL 120 Query: 120 YQRYPQATIKLRNWDYDS-LDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSD 178 Q P I++ D + + + RGE+D+ G +P + + LF++ Sbjct: 121 RQAAPGIDIRVSRLDRRTVVQQLERGEIDVALGGHL----------EVPEGMLVQPLFNE 170 Query: 179 VPCVWLRKDHP-ALHQTWNLDTFLRYPHISICWE--QSDTWALDNVLQELGRERTIAMSL 235 + HP ++WNL ++ PH S +D L E+G ER +A + Sbjct: 171 SFTCIASRHHPQIAAESWNLQQYIGLPHALYAPSDDGSARGIIDQRLTEMGLERRVAATF 230 Query: 236 PEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWH 295 + A D L+ A + + ++ + LP V + Sbjct: 231 SHIIALPAVVAGSD-LIATLATSVARQFADPSRIQFLPLPSELAMPAFPIECVAGRQV-- 287 Query: 296 KRNSHNPKIVWLRETIKNL 314 +P + WL +T+ L Sbjct: 288 ---KRDPALAWLCDTLSQL 303 >UniRef50_A6FYP7 Transcriptional regulator, LysR family protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6FYP7_9DELT Length = 312 Score = 278 bits (712), Expect = 2e-73, Method: Composition-based stats. Identities = 87/317 (27%), Positives = 134/317 (42%), Gaps = 18/317 (5%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 + LDLNLL+ +L +ERSVT+AA R+ VT SA+S +L +LR +D L V + G++ Sbjct: 9 LAQLDLNLLVAFDVLAEERSVTRAAARLGVTQSAMSHTLRRLRGVLEDELLVRTRGGMAL 68 Query: 65 TPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQIYQR 122 TP ++ + + L P P F L ++ L L Sbjct: 69 TPRAAALVAPVRTGLTTLQRALADPEGFDPATSERHFRLTGPDLFELLYLPRLIAGFGAS 128 Query: 123 YPQATIKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPC 181 + ++ L + L D + GE+D+ + R R + + VL D Sbjct: 129 AGRLSVTLAHVAPRQLADQLETGELDLAITARMLDGREQPAQ----PGLMRRVLLRDGWR 184 Query: 182 VWLRKDHPAL--HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFE 239 ++R HPAL +L FL H+ + +D VL E +RT+A+ + F Sbjct: 185 CFVRAGHPALTKRGRLSLPRFLAASHVMVSPTGRGQGIVDVVLAEQDEQRTVAVRVSSFA 244 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 + +AA D L+ TAP + L VA PLP E + WH+R S Sbjct: 245 TAPVVAASSD--LILTAPASLEAVVGHLGLVCVAPPLPLPEH-------SVDMTWHQRLS 295 Query: 300 HNPKIVWLRETIKNLYA 316 +P WLRE + Sbjct: 296 EDPGHQWLREQLVAATR 312 >UniRef50_A5W6Q9 Transcriptional regulator, LysR family n=12 Tax=Pseudomonas RepID=A5W6Q9_PSEP1 Length = 326 Score = 278 bits (712), Expect = 2e-73, Method: Composition-based stats. Identities = 75/317 (23%), Positives = 133/317 (41%), Gaps = 24/317 (7%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 +I+ DLNLL +L++E++V++AA+R+ +T VS +LA+LR DPL V + Sbjct: 26 MNISNFDLNLLRVFDMLLREQNVSRAAERLALTQPTVSNALARLRDQLGDPLLVRVGRRM 85 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTP--RGLKFELAAESPLMMIMLNALSKQIY 120 PTP +++E + +Q L P + +A + + + L ++ Sbjct: 86 RPTPRALALEGPIRAALQQIEQTLGTGDGFEPQRSHRQLRIALTDFVEQLCMPPLLARLE 145 Query: 121 QRYPQATIKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 P I + + + +A+ RG++D+ +P + Sbjct: 146 LLAPNVRIDVVHLAPNLPAEALDRGDLDLVLGR----------FDEVPARFTRHPWRRET 195 Query: 180 PCVWLRKDHPAL--HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPE 237 + LR+ HP L Q +LD FL HI + +D L E G R IA + P Sbjct: 196 LQIALRQQHPHLVPGQALDLDAFLGLRHIWVH-GGQTRGMVDQWLAEQGLTRQIAYTTPN 254 Query: 238 FEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKR 297 + Q+ +AA D + + + Q + L L + LP + + + + + Sbjct: 255 YLQAAHLAAATD-MCVVLPRQLAQQFAHLLPLAVYELPFALEPFELEVVHLS-------H 306 Query: 298 NSHNPKIVWLRETIKNL 314 H+P + WL E I L Sbjct: 307 RQHDPALAWLVEQILTL 323 >UniRef50_Q46YJ7 Transcriptional regulator, LysR family n=5 Tax=cellular organisms RepID=Q46YJ7_RALEJ Length = 394 Score = 278 bits (711), Expect = 3e-73, Method: Composition-based stats. Identities = 73/318 (22%), Positives = 127/318 (39%), Gaps = 23/318 (7%) Query: 6 TTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPT 65 LD LL L L+ E+SVT+ A R+ + A+S +L +LR D + V G+ PT Sbjct: 84 DHLDTYLLRVLHTLLTEQSVTRTAVRLGQSQPAISNTLKRLREITGDAILVRGKSGMVPT 143 Query: 66 PLMVSMEQNLAEWMQMSNLLLDKPHHQTPR--GLKFELAAESPLMMIMLNALSKQIYQRY 123 + + + + + + P P F L A L L + +++ + Sbjct: 144 ERGRELLELAEQSLAAMDRIARPPQQFDPATTTRTFHLGAPDYLDAFFLPNIVERVRRLA 203 Query: 124 PQATIKLRNW--DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPC 181 P A + + D L+ + +G++DI S P + LF D Sbjct: 204 PGAKLFVHPMTSSSDFLEDLEQGQLDIVIGNWLSP----------PEHLHISPLFDDEVV 253 Query: 182 VWLRKDHPALHQTWNLDTFLRYPHISICW-EQSDTWALDNVLQELGRERTIAMSLPEFEQ 240 L HP + L +L PH++ +D L E G +R I ++LP F Sbjct: 254 CMLGAQHPLARKGLTLKHYLEMPHLAPAPYASMQRSMIDQALAEQGYKRNIQVTLPYFGL 313 Query: 241 SLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 ++ + D + T ++ +Y Q + +V P+ F + F LWH+R Sbjct: 314 VPYVLMKTDMVF-TTGRQFAAHYAQYLPIRMVPSPVTFPRMR-------FYQLWHERCHA 365 Query: 301 NPKIVWLRETIKNLYASM 318 P ++W+R I + + Sbjct: 366 APDVMWMRRMIAEVATDL 383 >UniRef50_Q3JR86 LysR-family regultor n=70 Tax=Proteobacteria RepID=Q3JR86_BURP1 Length = 508 Score = 277 bits (710), Expect = 3e-73, Method: Composition-based stats. Identities = 72/324 (22%), Positives = 135/324 (41%), Gaps = 24/324 (7%) Query: 1 MKKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPL 60 M + +D LL L L+ ERSVT+AA ++N + A+S +L +LR DPL V Sbjct: 200 MSQQREAIDTYLLRVLHTLLMERSVTRAAVKLNQSQPAISAALRRLRDITGDPLLVRGKS 259 Query: 61 GLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQ 118 G+ PT + + + + ++ + + H+ P + + L ++ + + ++ Sbjct: 260 GMVPTEYGLRLLEPVQNALREIERIKFQQHNFDPATSIRCYRIGCPDYLNVLFVPTVVER 319 Query: 119 IYQRYPQATIKLRNWDY--DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLF 176 Q P AT++ + D A+ G++DI P L + LF Sbjct: 320 FRQAAPNATLEFHSLGPAFDYELALEDGKLDIVVGNWPEPPEQLHLSN----------LF 369 Query: 177 SDVPCVWLRKDHPALH-QTWNLDTFLRYPHISICW-EQSDTWALDNVLQELGRERTIAMS 234 D + HP LD +L PH++ A+D L +R + ++ Sbjct: 370 VDEIVCLMSNSHPFAKRGGLTLDQYLNAPHLAPTPYSVGQRGAIDVHLARERLKRHVVVT 429 Query: 235 LPEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLW 294 LP F + ++ + D + T + +Y + L +V PL F + + LW Sbjct: 430 LPYFNLAPYVLVKSDLIFTTT-RLFADHYAKFLPLSVVPAPLDFP-------PMQYYQLW 481 Query: 295 HKRNSHNPKIVWLRETIKNLYASM 318 H+R ++ ++ WLR + ++ Sbjct: 482 HERCHYSDEVRWLRGLVAEATRTL 505 >UniRef50_Q88I06 Nodulation protein d1 n=4 Tax=Gammaproteobacteria RepID=Q88I06_PSEPK Length = 312 Score = 277 bits (709), Expect = 4e-73, Method: Composition-based stats. Identities = 70/317 (22%), Positives = 140/317 (44%), Gaps = 21/317 (6%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 LDLNLL+ L +L++E+++T+AA+R+++T SA S L +LR +F+D L V + Sbjct: 1 MRFHHLDLNLLVALDILLEEQNITRAAERLHMTQSATSGVLGRLRTFFEDELLVQVGRKM 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPR--GLKFELAAESPLMMIMLNALSKQIY 120 PTP + + + + E + + P F L A L+ ++ + ++I+ Sbjct: 61 QPTPYALELAKPVREVLLTIRASITAKPVFDPAASKRHFRLVASDYLISVVFAQVIQKIH 120 Query: 121 QRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 Q PQ T ++ S + + RGEVD+ L ++LF + Sbjct: 121 QEAPQITFEMIGPGDSSAELLMRGEVDMMIVPE----------RYLIEGHPAQLLFEEDH 170 Query: 181 CVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVL-QELGRERTIAMSLPEFE 239 + +D+P + + L+ +++ HIS+ + ++ ++++ + G R + + +F Sbjct: 171 VCVVWRDNPEVGEHLTLEQYMQMGHISVGFGRNRHLSIEDWFMNQYGFNRRLEVITNDFN 230 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 + + R + Y L L+ P+ ++ +LWH+ Sbjct: 231 TLPQLLVGT-VRVATMHRRLAELYAGYLPLRLLPPPVKIPVMRE-------FMLWHRSMD 282 Query: 300 HNPKIVWLRETIKNLYA 316 +P WLRE I ++ Sbjct: 283 GDPMHRWLRERISDVIQ 299 >UniRef50_C4KB22 Transcriptional regulator, LysR family n=37 Tax=Betaproteobacteria RepID=C4KB22_THASP Length = 333 Score = 277 bits (709), Expect = 5e-73, Method: Composition-based stats. Identities = 63/318 (19%), Positives = 117/318 (36%), Gaps = 19/318 (5%) Query: 2 KKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLG 61 + S+ DLNLL L + + SV++AA+ + ++ VS +L +LR +PLF+ + G Sbjct: 21 RMSLRDFDLNLLRVLLAVYEAGSVSRAAEHLGLSQPTVSSALGRLRRALGEPLFIKTASG 80 Query: 62 LSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPR--GLKFELAAESPLMMIMLNALSKQI 119 ++PT ++ + + P +A ++ L + + Sbjct: 81 VTPTARTHALASSARAMLARLETDFFVADRFDPAKYEGNLTVALSDVGELVFLPRILDSV 140 Query: 120 YQRYPQATIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSD 178 + P A + + + A+ GEVD+ E L Sbjct: 141 RRLAPLAMLDSVTLAPGELMRAMEDGEVDLAIGYYPDLDA---------AGFYREKLLDH 191 Query: 179 VPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEF 238 LR DHP + +L+ FL H ++ + + L+ L +R I + P F Sbjct: 192 RFVCLLRADHPVQDRQLSLERFLSLEHAAVRAKGRSQEIFEKYLERLRIQRRIVLRTPHF 251 Query: 239 EQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRN 298 + + D L+ T P +Y + P + WH+ Sbjct: 252 MSLPGIIGRSD--LVVTLPHAIGHYFTRVGEKVRMAEPPLAIP-----HIELYQHWHRGF 304 Query: 299 SHNPKIVWLRETIKNLYA 316 H+P+ WLR + L++ Sbjct: 305 HHDPRNRWLRTLVAGLFS 322 >UniRef50_A8V9B9 LysR-like regulatory protein n=2 Tax=Betaproteobacteria RepID=A8V9B9_9BURK Length = 308 Score = 276 bits (708), Expect = 5e-73, Method: Composition-based stats. Identities = 59/310 (19%), Positives = 120/310 (38%), Gaps = 20/310 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +D+ LL + SVT+AA+ + ++ +S +L+KLR + DPLFV + G+ TP Sbjct: 4 IDVKLLNVFAETYRTSSVTQAAENLGLSQPTISFNLSKLRDHYKDPLFVRTSRGMEATPF 63 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTP--RGLKFELAAESPLMMIMLNALSKQIYQRYPQ 125 + + + + + + + P F +A +++L L ++ P+ Sbjct: 64 AQELYEQVVDLLASFSNIARLQTSFDPSEAQRIFRIAMTDISQIVLLPTLLNKLRIVAPR 123 Query: 126 ATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 A +++ + ++ + GEV++ + L + LF V Sbjct: 124 AQLRISHITTETPRMLESGEVELAVGF----------MPQLDAGFYQQKLFPQRFVVLAA 173 Query: 186 KDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMA 245 H AL + +L+ +L H+++ + +D L+E R + + +P + + Sbjct: 174 SRHVALGDSMSLEYYLSAGHVTVTPSGTGHSIIDRTLREQQLHRHVVLDVPNYLAIADIV 233 Query: 246 AQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIV 305 AQ D LL + + +P + WH R + Sbjct: 234 AQTD-LLATVPQKLADLMSSSVDARRYPVPFEIP-------QYDVKQHWHARTHQDAGHR 285 Query: 306 WLRETIKNLY 315 WLR + L+ Sbjct: 286 WLRALLAELF 295 >UniRef50_C5AL93 Transcriptional regulator, LysR family protein n=13 Tax=Burkholderia RepID=C5AL93_BURGB Length = 331 Score = 276 bits (707), Expect = 8e-73, Method: Composition-based stats. Identities = 76/322 (23%), Positives = 133/322 (41%), Gaps = 24/322 (7%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 +S+ +DLNLL +++E+S+TKA R+ ++ A+S SLA+LRA FDDPLFV + G+ Sbjct: 2 RSLDGVDLNLLQVFLAIVEEQSLTKAGARLALSQPAMSYSLARLRALFDDPLFVRTRHGM 61 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPR--GLKFELAAESPLMMIMLNALSKQIY 120 PTP+ + +A + L P F L+ M L ++ +++ Sbjct: 62 QPTPISQELAVIVARALDTVREALRYAERFDPAVSTRAFRLSLSDAGEMAYLPSICEEVN 121 Query: 121 QRYPQATIKLRNWD-YDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 + P + ++ + DA+ +D L L ++VLF + Sbjct: 122 RLAPNIKVVVQPLPVGEIEDALRARRLDFAIGN----------LPELTARTRHQVLFEEG 171 Query: 180 PCVWLRK--DHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPE 237 +R+ P L F R H+ + + ALD+ L+ G R I + +P Sbjct: 172 YVCMMRRRVGGP-ARPALTLAEFGRASHVLVRSIEHSHHALDDALRTQGVARNIGLEVPH 230 Query: 238 FEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKR 297 F + A D + R Q + + + LP+ V T+ WH+ Sbjct: 231 FVALPRVLAVTDFVA-TLPRRLAQIFAKDGAFDIFELPVAI-------APVGVTMHWHEH 282 Query: 298 NSHNPKIVWLRETIKNLYASMA 319 + I W+R+ + + A Sbjct: 283 FHEDEGIAWMRQLLGQIMRRFA 304 >UniRef50_B8KV86 Putative transcriptional regulator, LysR family n=1 Tax=gamma proteobacterium NOR51-B RepID=B8KV86_9GAMM Length = 302 Score = 276 bits (706), Expect = 1e-72, Method: Composition-based stats. Identities = 60/317 (18%), Positives = 135/317 (42%), Gaps = 21/317 (6%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 ++ ++DLNLL ++ E ++T AA +I ++ A+S +L +LR DD LFV++ G+ Sbjct: 1 MNLRSVDLNLLTIFDAIVSEGNLTHAADKIGMSQPAISAALGRLRVTLDDELFVSTGRGV 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTP--RGLKFELAAESPLMMIMLNALSKQIY 120 PT + +++ + ++ L P F +++ ++++ L + + Sbjct: 61 KPTQRALQLQEPVRRILEDVRAALTSTGEFDPESSDRVFTISSIDYGGIVVIPRLLRYLQ 120 Query: 121 QRYPQATIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 ++ + + ++ + R D+ + L + ++L ++ Sbjct: 121 KQQSPIIVNINPSQTGEAHRDVDRSSGDLTITSDPL----------LSPDHECKLLRREL 170 Query: 180 PCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFE 239 P RKDHP + + +++ F R H+ + + ALD L +LG R +P F Sbjct: 171 PYCLARKDHPDITGSLSVEQFQRNRHVLLYSNNTRGLALDAHLLQLGFNRECGARVPSFF 230 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 ++ D + + + + + L ++A P + ++WH+ + Sbjct: 231 NMPYIVGNTDMIC-TMPRQMAEDFARQFGLQVLAAPF-------DNWTASYFMVWHRSFN 282 Query: 300 HNPKIVWLRETIKNLYA 316 + WLR++I L + Sbjct: 283 GDSGHCWLRDSIFRLCS 299 >UniRef50_D1TCI7 LysR family transcriptional regulator n=2 Tax=Burkholderia RepID=D1TCI7_9BURK Length = 329 Score = 275 bits (705), Expect = 1e-72, Method: Composition-based stats. Identities = 68/321 (21%), Positives = 130/321 (40%), Gaps = 24/321 (7%) Query: 2 KKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLG 61 + DLNLL+ + L++ERSVT+AA+R+ + AVS +L +LR F D LFV +P G Sbjct: 19 ENDFRRFDLNLLVTFRALLEERSVTRAAQRLLLGQPAVSGALKRLRETFGDELFVRTPQG 78 Query: 62 LSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTP--RGLKFELAAESPLMMIMLNALSKQI 119 ++PTP + + + + ++Q + L +P P F + L ++++ + ++ Sbjct: 79 MTPTPRALELARQIEPFLQSLHQALTQPSVFDPASAQRVFRIGLSDSLELLLMPEIMARL 138 Query: 120 YQRYPQATIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSD 178 P + R+ D + + G +++ + LFS Sbjct: 139 AAAAPGVKLIARSTDSTRAAAMLDDGAIELAVG----------VFRECVPWQRLMPLFSW 188 Query: 179 VPCVWLRKDHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPE 237 + ++D FLR+ H+ + +D L+ G R + S Sbjct: 189 RFVSVYNPQLVRTRRKHLSMDEFLRHRHVLTSFSAELRGFIDERLELQGLNREVVFSSSN 248 Query: 238 FEQSLFMAAQPDNLLLATAPRYC-QYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHK 296 F S F+ + +AT P + + + L L LP +L+W Sbjct: 249 FATSPFIVQRT--AAIATVPEFIGRVWRDTLGLALSPLPFEVP-------GYEVSLMWAA 299 Query: 297 RNSHNPKIVWLRETIKNLYAS 317 + +P + WL+ + + + Sbjct: 300 AHDQDPALAWLKREFADAFGT 320 >UniRef50_Q0VLU8 Transcriptional regulator, LysR family n=2 Tax=Alcanivorax RepID=Q0VLU8_ALCBS Length = 310 Score = 275 bits (705), Expect = 1e-72, Method: Composition-based stats. Identities = 74/313 (23%), Positives = 122/313 (38%), Gaps = 23/313 (7%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 ++ DLNL + + E S+T+AAK +N+T AVS +LA+LRA +DPLFV + Sbjct: 1 MHVSRFDLNLFVVFDAIYTEGSLTRAAKVLNLTQPAVSHALARLRARLNDPLFVRQGSRM 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTP--RGLKFELAAESPLMMIMLNALSKQIY 120 PT +M + + L + F L L +L AL Q Sbjct: 61 VPTARARAMVSPVRHALGGFQRCLSEEGGFDASEAERTFVLGLRDGLEARLLPALMSQFM 120 Query: 121 QRYPQATIKLRNWDYDSLD-AITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 P ++ + + G +D+ +++ +LP AI+++V+ Sbjct: 121 DEAPGIKLQSLTVSRRQMATELASGRLDLA----------CDVMLALPEAIEHQVVLEGP 170 Query: 180 PCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFE 239 V +R+ HP +L +L H+ + + D L G R I + ++ Sbjct: 171 LVVLMRESHPLAQG-MDLPDYLAAQHVLVSSRREGPGLEDFGLARQGYRRHIRLRCQHYQ 229 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 +L Q D LLL + LV P P + L WH+ S Sbjct: 230 AALSTVQQTD-LLLTMPASLAGQLSDQ---GLVWKPFP-----GGLPGLEMHLYWHRDQS 280 Query: 300 HNPKIVWLRETIK 312 +P WLR+ + Sbjct: 281 ADPAHSWLRQRVL 293 >UniRef50_A4SSQ1 Transcriptional regulator, LysR family n=2 Tax=Aeromonas RepID=A4SSQ1_AERS4 Length = 322 Score = 275 bits (704), Expect = 1e-72, Method: Composition-based stats. Identities = 101/314 (32%), Positives = 169/314 (53%), Gaps = 10/314 (3%) Query: 4 SITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLS 63 + +DLNLL+ LQ+L++ER+ ++AA+R++++ SAVSK+L +LR FDDPLFV S GL Sbjct: 5 QLGRIDLNLLIILQVLLEERNGSRAARRLHLSQSAVSKALGRLRETFDDPLFVRSAYGLE 64 Query: 64 PTPLMVSMEQNLAEWMQMSNLLLDKP-HHQTPRGLKFELAAESPLMMIMLNALSKQIYQR 122 PT + ++Q L + + L+ P +F +A+ + ++ ++ Sbjct: 65 PTARALVLQQQLQPILLSLDNLIQPPDFDPASTEREFVIASMDSAFTLFAPLYLSELKRQ 124 Query: 123 YPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCV 182 P ++ W +SL +++G+VDI F+ RE+ S L +LP AI +L D Sbjct: 125 APGIRLRYEEWTENSLTEMSQGQVDIAFTVRENCISSDFRLDTLPNAICQRLLAIDDLTC 184 Query: 183 WLRKDHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQS 241 ++ DHPALH+ W+L +L YPH+ E D W LD+ L + R I ++P FE + Sbjct: 185 LVQHDHPALHEPEWDLARYLAYPHVQTYCEGRDRWMLDHKLAGMDLYRRIEATVPSFEAA 244 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 L M D +++ + Y ++ Q++ L + LP+ D + L+WH+R+ + Sbjct: 245 LRMGMHSD-MIVTLSRLYARHATQVYPLVPLPLPIALD-------SISHLLIWHQRHEED 296 Query: 302 PKIVWLRETIKNLY 315 P WLRET+ L Sbjct: 297 PGHRWLRETLLALI 310 >UniRef50_C6DDI5 Transcriptional regulator, LysR family n=4 Tax=Enterobacteriaceae RepID=C6DDI5_PECCP Length = 310 Score = 275 bits (704), Expect = 1e-72, Method: Composition-based stats. Identities = 73/320 (22%), Positives = 125/320 (39%), Gaps = 21/320 (6%) Query: 1 MKKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPL 60 M+ +DLNLL+ +L +ERSV+ AA ++++ AVS +LA+LR FDDPLF+ + Sbjct: 1 MENDFRGVDLNLLVTFLVLYRERSVSVAADKLHLGQPAVSGALARLRTLFDDPLFIRTGQ 60 Query: 61 GLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQ 118 + PT + L+ + +L +P P L + + ++ L K+ Sbjct: 61 VMRPTARADYLATQLSPAFEQLQSVLGEPESFDPLTDSRAITLGMTDWVEIWLMPLLLKR 120 Query: 119 IYQRYPQATIKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFS 177 + P I L D ++ + VD+ S + L S Sbjct: 121 LKANAPHLRINLVATDPFLDVERLENDSVDLVISVASPQAG----------WLKQRALLS 170 Query: 178 DVPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPE 237 AL L+ + + H+ + + + +D++L++ G RTI + P Sbjct: 171 SGFRALWHPQQLALPSPVPLEVYSQQRHLLVTYRERAHGIVDDMLEKQGMTRTIYYTTPH 230 Query: 238 FEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKR 297 F + ++ + + Q + L P+P D + LWH R Sbjct: 231 FSALPGILQHTPSVA-TVPEKLATLWCQHYGLN--DSPVPLDLPT-----YTLSALWHAR 282 Query: 298 NSHNPKIVWLRETIKNLYAS 317 NP I WL E I A Sbjct: 283 QDSNPAIAWLYEQIAEAIAE 302 >UniRef50_Q391Q9 Transcriptional regulator, LysR family n=1 Tax=Burkholderia sp. 383 RepID=Q391Q9_BURS3 Length = 322 Score = 275 bits (704), Expect = 2e-72, Method: Composition-based stats. Identities = 72/321 (22%), Positives = 126/321 (39%), Gaps = 17/321 (5%) Query: 1 MKKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPL 60 MK LDLNLL LM E +VT+AA+R+ ++ SAVS +L +LR D LF + Sbjct: 1 MKDVFRQLDLNLLRVFAALMAEGNVTRAAERLALSQSAVSNALRRLRESLGDVLFEKTVS 60 Query: 61 GLSPTPLMVSMEQNLAEWMQMSNLLLDK-PHHQTPRGLKFELAAESPLMMIMLNALSKQI 119 G+ PT + + + F +A + ++ L+ + Sbjct: 61 GVRPTARARELWSAVQPHFDALKQAISPDQFDPQEHRGTFTIAMSDYSVERIMPRLAHFM 120 Query: 120 YQRYPQATIKLRNWD-YDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSD 178 + P I+L + D RG VD+ G + + ++ Sbjct: 121 GEHAPSMRIELTPFSVADLPAMFDRGGVDLAIGGYLNDSSP-------SSGVRTHEMWPI 173 Query: 179 VPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEF 238 +RKDHP L FL H+ + + D++L G +R + ++L + Sbjct: 174 HWSCLMRKDHPLAKGPLTLKRFLAARHLDVGFSGMRVPVYDSLLSAHGLQRNLVLTLNAY 233 Query: 239 EQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRN 298 +L + + D + + L L + L + + P+ ++WH+R Sbjct: 234 SPALAIIRESDFIGVLP--------TTLLDLSIHEKELVSRQPPVRMPARPYCVIWHQRW 285 Query: 299 SHNPKIVWLRETIKNLYASMA 319 +P WLR+TI +L+ A Sbjct: 286 DSHPAHRWLRQTIVSLFTRPA 306 >UniRef50_A9GGP1 LysR-family transcriptional regulator n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9GGP1_SORC5 Length = 312 Score = 275 bits (704), Expect = 2e-72, Method: Composition-based stats. Identities = 72/316 (22%), Positives = 129/316 (40%), Gaps = 19/316 (6%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 +++ +D+NL++ L L+QERSVT AA+R+ ++ A+S +L +LR F DPL + + Sbjct: 1 MNLSAIDVNLVIALDALLQERSVTLAARRVGLSQPAMSHALTRLRELFSDPLLIRVGRQM 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLD---KPHHQTPRGLKFELAAESPLMMIMLNALSKQI 119 + T +M + + L F +AA + ++++ L+ + Sbjct: 61 ALTSRAEAMTPQVTAIVHDLAGLFGETTPTFDPATSDRAFRIAATEYVELVLMPRLNAAL 120 Query: 120 YQRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 Q P+ + L D ++DA+ GE+D+ SLP + LF D Sbjct: 121 AQGGPRLALHLLPLDGRAVDALRSGEIDLAIGVFPQE--------SLPPDLRRAPLFDDR 172 Query: 180 PCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFE 239 R HP +L T+ PH+ + + D+++ G R AM++P Sbjct: 173 FAGLARMSHPTARGQVDLQTYAALPHVVVPRRGAHDGVADDLIAARGIARHEAMTVPHVL 232 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 D L+ A R + ++ L L LP + + W+ R Sbjct: 233 LVPHAITASD-LVATVATRLGRAFSSLVPLRTFDLPFELP-------PIEIAMAWNSRTE 284 Query: 300 HNPKIVWLRETIKNLY 315 +P WLR + + Sbjct: 285 RDPARAWLRGVVTDTA 300 >UniRef50_Q2BJ61 Transcriptional regulator, LysR family protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BJ61_9GAMM Length = 302 Score = 275 bits (704), Expect = 2e-72, Method: Composition-based stats. Identities = 62/315 (19%), Positives = 126/315 (40%), Gaps = 15/315 (4%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 ++ ++DLNLL+ LQ L+ E+ V+KAA+R+N++ AVS++L +LR DP+ V + G Sbjct: 1 MNLRSVDLNLLVVLQALIDEQHVSKAAERLNMSQPAVSRALQRLRTTLQDPILVRTGSGY 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDK-PHHQTPRGLKFELAAESPLMMIMLNALSKQIYQ 121 + V + + L+ + ++ +L +++++ + + + + Sbjct: 61 DLSARAVVLREQLSHVLHEVQAIMQPEQFDPMQAEGVLKLTGLDLELILLMPDVIRMLRE 120 Query: 122 RYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPC 181 + P +++ + + + RG+V +G + Sbjct: 121 KAPNLRVEVVPQLPEHFELLERGDVHFTITGLFPQTH--------HDQYRRIEIARTGHV 172 Query: 182 VWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQS 241 + +D+P +L + H + +D+ L E G +R + + L F Sbjct: 173 CVMDRDNPLAKGELSLQDYANASHGLVSITGKGPGMMDDALGEFGYKRKVMLRLANFMSV 232 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 Q D L+ + Q L L LP F EV + WH R H+ Sbjct: 233 AQFCQQSD-LIFTLPKIMATHLAQGTSLVLRPLPKEFALP-----EVVLYMYWHDRYHHD 286 Query: 302 PKIVWLRETIKNLYA 316 P W+R + +++ Sbjct: 287 PMCSWVRAELAEIFS 301 >UniRef50_A6VSJ2 Transcriptional regulator, LysR family n=28 Tax=Proteobacteria RepID=A6VSJ2_MARMS Length = 328 Score = 274 bits (703), Expect = 2e-72, Method: Composition-based stats. Identities = 82/317 (25%), Positives = 135/317 (42%), Gaps = 19/317 (5%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 ++ +DLNLL+ L L+ E+ V++AA+R++ + A+S +LA LRA F+DPL V L Sbjct: 21 NNLRRIDLNLLVTLHALLVEKHVSRAAQRLHKSQPAISHALANLRAIFNDPLLVRRTGKL 80 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKP-HHQTPRGLKFELAAESPLMMIMLNALSKQIYQ 121 T + L E + L+++P T F LA ++L L + + Sbjct: 81 ELTSRANELLPTLTEALHQLGALIEQPTFESTQAKRVFRLAMSDYGSRVVLPGLIQILRS 140 Query: 122 RYPQATIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 R P +++ L + GE+D+ F S L + LF + Sbjct: 141 RAPGIDLQVIQGSRTSMLTGVYDGEIDMAFGVFN---------SPLSDELHTHTLFIEHF 191 Query: 181 CVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQ 240 K+ + +L PHI + + +++ ++N L G R IAM+LP + Sbjct: 192 ICAADKNTLPKTGSLEKTQWLSRPHILVAMQTNESNEIENALHREGVSRRIAMTLPHWGV 251 Query: 241 SLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 + M A D +L A A R + + L L P P D F+++WH R Sbjct: 252 ASHMVANTDLILTA-ARRSFDLFLEDSPLQLFTPPYPID-------PFKFSMVWHSRRES 303 Query: 301 NPKIVWLRETIKNLYAS 317 + WLR TI + Sbjct: 304 DAGHNWLRHTIIEMLRE 320 >UniRef50_B9Z7Z3 Transcriptional regulator, LysR family n=3 Tax=Proteobacteria RepID=B9Z7Z3_9NEIS Length = 324 Score = 274 bits (703), Expect = 2e-72, Method: Composition-based stats. Identities = 74/315 (23%), Positives = 135/315 (42%), Gaps = 21/315 (6%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 ++T D NLL+ L +L+ E SV +AA+R+ ++PSA+S++LA+LR DPL V + GL P Sbjct: 1 MSTPDFNLLVTLDVLLAEGSVARAARRLRLSPSAMSRALARLRETTGDPLLVRAGRGLVP 60 Query: 65 TPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQIYQR 122 TP + + + +++ +Q + +L F L + +L ++ + Sbjct: 61 TPRALELREQVSQLVQDAAAVLRPAEKLDLTQLVRTFTLRVGDGFVENFGPSLIARVGEA 120 Query: 123 YPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCV 182 P ++ + G VD+ + + + LF D Sbjct: 121 APGVRLRFMPKSNKDTAPLRDGSVDL---------DTGVVGEGTGPEVRVRALFQDRFIG 171 Query: 183 WLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 +R+ HP + H+ + +D +D L+ +G ER I + F +L Sbjct: 172 VVRQGHPLCQGEITPARYAAGRHVLVSRRGTDKGPVDETLRAIGLEREIMTIVGGFAPAL 231 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 +A D L+AT P + + + + + LPF E+ +LLWH R + Sbjct: 232 ALARATD--LVATVP---ERHTGTLRDGMHSFALPFPAP-----EITVSLLWHPRMDADL 281 Query: 303 KIVWLRETIKNLYAS 317 WLR ++ + A+ Sbjct: 282 AHRWLRGCVREICAA 296 >UniRef50_Q4KHX1 Transcriptional regulator, LysR family n=1 Tax=Pseudomonas fluorescens Pf-5 RepID=Q4KHX1_PSEF5 Length = 308 Score = 274 bits (703), Expect = 2e-72, Method: Composition-based stats. Identities = 80/318 (25%), Positives = 140/318 (44%), Gaps = 21/318 (6%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 + +DLNLL+ L L+ E+ VT+ A R++++ A+S SL+KLR DDP+ + L Sbjct: 6 LRNIDLNLLVVLDALLTEKHVTRTALRLHLSQPAISHSLSKLRGLLDDPILIRRGSELVL 65 Query: 65 TPLMVSMEQNLAEWMQMSNLLLDKPHHQTPR--GLKFELAAESPLMMIMLNALSKQIYQR 122 + L +++Q L E + L K P F LA ++L L ++ + Sbjct: 66 SSLAQNIQQPLREILGQIETLFGKSIDFDPASSQRIFTLAMSDYGAALVLPNLMVRLRRD 125 Query: 123 YPQATIKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPC 181 P T+ + + +++G++D+ + +L I EVLF + Sbjct: 126 APNTTLVVTQDTRHGMFEQVSQGKIDLALG----------VFPNLSGDISTEVLFEETFS 175 Query: 182 VWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQS 241 L + T +LD++L PHI + + S +D++L++ G +R IA+S+P + + Sbjct: 176 CLLDRRTLPADGTLDLDSYLARPHILVSMDGSANGEVDSLLRDEGLQRRIAVSVPHWRTA 235 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 M D +L + + L PF +WH+R + Sbjct: 236 PSMIHNTDLILTVATRTLDEALLNQDLIQLR--------PPLPIPPFPFVQIWHQRFDNE 287 Query: 302 PKIVWLRETIKNLYASMA 319 P VWLRE +K + A A Sbjct: 288 PAHVWLREQVKQVVAHSA 305 >UniRef50_B7CP85 Transcriptional regulator, LysR family protein n=1 Tax=Burkholderia pseudomallei 576 RepID=B7CP85_BURPS Length = 305 Score = 274 bits (702), Expect = 2e-72, Method: Composition-based stats. Identities = 76/320 (23%), Positives = 133/320 (41%), Gaps = 21/320 (6%) Query: 1 MKK-SITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSP 59 M I DLNLLL +L++ER V+KAA R +++ A+S+ L +LR F D L V + Sbjct: 1 MHMKHIRGADLNLLLAAFVLLEERQVSKAADRYHLSQPAMSRMLQRLRDTFGDELLVRTR 60 Query: 60 LGLSPTPLMVSMEQNLAEWMQMSNLLLDKP-HHQTPRGLKFELAAESPLMMIMLNALSKQ 118 G PT + L E + + LL T F +A I+ L ++ Sbjct: 61 GGFEPTVRGRYILHELGELLPRLDALLRGGLFDPTEAEDTFRVACTDYATTILGPRLFER 120 Query: 119 IYQRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSD 178 +++ P ++ + W + +AI G +D+ E +P + E LF D Sbjct: 121 VFREAPNVSMDVVAWHDHAFEAIEHGRLDLVLWPNE-----------VPDTLYSETLFED 169 Query: 179 VPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEF 238 + DHP+ L +LR+PH + ++ L ++G R + + F Sbjct: 170 DFVCMMSSDHPSGDGPLVLRDYLRFPHAVVSVLGGKQTIVEQRLHDMGVRRAAGLRVSYF 229 Query: 239 EQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRN 298 ++ A+ L+ R Y + +V P F ++ + ++WH R Sbjct: 230 SGAITAIART-ALIATVPRRLAMLYRDRANIRIVEAPAMF-------GKLSYKMVWHPRA 281 Query: 299 SHNPKIVWLRETIKNLYASM 318 + + WLR+TI+ + Sbjct: 282 DGDLALQWLRQTIRAAANDI 301 >UniRef50_C7RKX8 Transcriptional regulator, LysR family n=20 Tax=Proteobacteria RepID=C7RKX8_9PROT Length = 310 Score = 274 bits (702), Expect = 3e-72, Method: Composition-based stats. Identities = 75/315 (23%), Positives = 132/315 (41%), Gaps = 21/315 (6%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 ++T DLNLL+ L +L+ E SV +AA+R+ ++PSA+S++LA+LRA DPL V + GL P Sbjct: 1 MSTADLNLLVTLDVLLAEGSVARAAQRLRLSPSAMSRALARLRATTGDPLLVRAGRGLVP 60 Query: 65 TPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQIYQR 122 TP + + + + +Q + L + L + L ++ ++ Sbjct: 61 TPRALELREQVGPLVQAAEAALRPVEKLDLERLVRMYTLRTSEGFVENFGPDLIARVAEQ 120 Query: 123 YPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCV 182 P + + + G VD+ + + + + + LF D Sbjct: 121 APGVRLCFVQKSNKNSAPLRDGSVDL---------ETGVVGKATAPELRVQALFRDRFIG 171 Query: 183 WLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 +R HP + HI + D +D L+ LG ER I + F +L Sbjct: 172 VVRMGHPLSQGEMTPHRYATGKHILVSRRGFDRGMIDEALKPLGLERQIVTIVSGFSTAL 231 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 +A D L+A+ P + + + + + PLP E+ +L WH R +P Sbjct: 232 VLARASD--LIASVP---ERHTAKLRAGMHSFPLPIATP-----EITVSLHWHPRMDADP 281 Query: 303 KIVWLRETIKNLYAS 317 WLR ++ + Sbjct: 282 AHRWLRGCVREVCGE 296 >UniRef50_A4XX96 Transcriptional regulator, LysR family n=3 Tax=Proteobacteria RepID=A4XX96_PSEMY Length = 312 Score = 274 bits (702), Expect = 3e-72, Method: Composition-based stats. Identities = 83/321 (25%), Positives = 141/321 (43%), Gaps = 24/321 (7%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 LDLNLL+ L+ L+ E++VT+AA R++++ AVS L++LR F+DPL + + G+ Sbjct: 1 MDTRRLDLNLLVTLEALLIEQNVTRAAARLHLSQPAVSAQLSRLRDVFNDPLLIPAQRGM 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGL--KFELAAESPLMMIMLNALSKQIY 120 +PT + + L + + + + P +A + ++ L + Sbjct: 61 TPTVKALELLVPLRQALDQVRATVTTHLNFEPATASLTVSIACTDYVQAALIKHLVVAMR 120 Query: 121 QRYPQATIKLRNWDYDSLD-AITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 + P I LR D L+ +TRGEVD+ ++ P A+ + L+ + Sbjct: 121 REAPGVRIALRILDVPQLELQMTRGEVDLAVIN----------MNGAPPALHAQHLYDES 170 Query: 180 PCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWA-LDNVLQELGRERTIAMSLPEF 238 + R+ HP+LH +D F + H+ + +DN L G R + +S F Sbjct: 171 YVLIGRRGHPSLHAGLTVDEFAQLEHVVVSLRGGGFSTSVDNALVARGLRRNVVLSASSF 230 Query: 239 EQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRN 298 + AQ D +A PR + QL VA PLP + + WH+R+ Sbjct: 231 LPVPELVAQSDC--VALVPRRLVE-GRDEQLLCVAPPLPVE-------GFAIGMFWHERS 280 Query: 299 SHNPKIVWLRETIKNLYASMA 319 + W+RE I + S A Sbjct: 281 DGHAGFRWVREFITLVADSRA 301 >UniRef50_Q0ARX0 Transcriptional regulator, LysR family n=1 Tax=Maricaulis maris MCS10 RepID=Q0ARX0_MARMM Length = 334 Score = 274 bits (702), Expect = 3e-72, Method: Composition-based stats. Identities = 66/316 (20%), Positives = 128/316 (40%), Gaps = 21/316 (6%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 S+ +DLNLL+ L ER+VT+AA+R+NV+ VS +L++LR F D LF+ +P G+ Sbjct: 4 MSLKHVDLNLLITFDALWHERNVTRAARRLNVSQPTVSNALSRLRLAFGDQLFLRAPRGI 63 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQIY 120 PT + +++ E ++ LD + +F + + +L L + Sbjct: 64 EPTERCSEIIKDVREALRHIEQALDSGPAFDAKQCRREFHIGCADYFDLFVLPDLLAYMA 123 Query: 121 QRYPQATIKLRNWD-YDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 + P ++LR+ D + +D + GE+D + + Sbjct: 124 EHAPMIDLRLRSVDIEEGMDLLDAGELDFMMHMEFPAA----------KRFGVRPVLHER 173 Query: 180 PCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFE 239 R HP + + ++ TF H++ +D VL LG R +A++ Sbjct: 174 HVFATRAGHPLVREAPDIATFASLSHVNFSQRGDSESPVDEVLARLGYRRRVAITTQHMT 233 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 + D L+ + R + + +P +++ P + W++R Sbjct: 234 TVAHLVKTTD-LVASVPSRMAARMVEEGGFAVYPIPFQIEKA-------PVAVYWNRRFE 285 Query: 300 HNPKIVWLRETIKNLY 315 + + W+R+ I Sbjct: 286 LDGAMRWMRDAIIEFC 301 >UniRef50_A6EW06 Transcriptional regulator n=2 Tax=Marinobacter RepID=A6EW06_9ALTE Length = 315 Score = 274 bits (702), Expect = 3e-72, Method: Composition-based stats. Identities = 67/310 (21%), Positives = 126/310 (40%), Gaps = 20/310 (6%) Query: 10 LNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMV 69 L LL +M ERSVT+AA R+ +T AVS +++++R ++DPLFV + PT + Sbjct: 6 LQLLYIFDAIMTERSVTRAADRLAMTQPAVSNAISRMRQIWNDPLFVRKGRNIEPTSYAL 65 Query: 70 SMEQNLAEWMQMSNLLLDK-PHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQATI 128 S+ + + M + F +A ++ ++ L + + P + Sbjct: 66 SLWDQVGDPMFALTNAVSATQFDPASARRTFRIAVTDVIVEMIWRQLIDLLEREAPGVDV 125 Query: 129 KLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKD 187 + + S D + VD+ +L+ ++ L + +R D Sbjct: 126 HAVPYTPEGSYDDLRSAHVDLAIG----------VLNQHDYSLRSTWLLDSGFVLAMRAD 175 Query: 188 HPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQ 247 HP + ++ FL H+ + ++D+ L + G+ R IA ++ F + + Sbjct: 176 HPLAGRQITMEEFLEARHLLVTMSGDAHGSVDSYLDQKGQSRRIAATMNHFASVPQVLRE 235 Query: 248 PDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWL 307 + L+ A Q + L + LP D L+WH R+ P I+W+ Sbjct: 236 SN-LIAAVPELISQDCGFVDGLWMGELPFDVD-------PTSLYLIWHARHDREPGIIWI 287 Query: 308 RETIKNLYAS 317 R I+ L + Sbjct: 288 RNHIERLLQA 297 >UniRef50_A9AQX4 Transcriptional regulator, LysR family n=20 Tax=Proteobacteria RepID=A9AQX4_BURM1 Length = 315 Score = 274 bits (701), Expect = 3e-72, Method: Composition-based stats. Identities = 73/321 (22%), Positives = 132/321 (41%), Gaps = 25/321 (7%) Query: 2 KKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLG 61 ++ +DLNL + + +R++T+AA+ +N+T AVS +LA++R +DPLFV++P G Sbjct: 17 AMRLSKIDLNLFVVFDAIYNKRNLTRAAELLNLTQPAVSNALARMRKTLNDPLFVSTPAG 76 Query: 62 LSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPR--GLKFELAAESPLMMIMLNALSKQI 119 + PTP ++ + E +Q+ + + + P F L+ ++L AL + + Sbjct: 77 MMPTPFAENIVGRVREALQLLDSSVHEGDVFDPASSERVFRLSMSDLTEALLLPALGELL 136 Query: 120 YQRYPQATIKLRNWDYDSLD-AITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSD 178 ++ P ++ D + A+ G VDI + L D Sbjct: 137 QRQAPGMHVRSYTMDRREIATALANGTVDIAIDAPLLG----------DPHLHQAPLVRD 186 Query: 179 VPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEF 238 +R HP T +D +L HI + + + +D L LG R I M + + Sbjct: 187 RYACMIRDGHPFKGDTLTMDDYLAMGHIHVSSRRKGSGHVDAELTRLGLRRNIQMRVQHY 246 Query: 239 EQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRN 298 + +A + D L A Q + ++ LP + + WH+ Sbjct: 247 MVAPLIAMRGDLALTAPLRLL-----QRYPARILELPFEMP-------GLEYFCYWHRSA 294 Query: 299 SHNPKIVWLRETIKNLYASMA 319 + WLRE + L M Sbjct: 295 DQDQANRWLRERLAELMRDMG 315 >UniRef50_B6JAE3 MexT protein n=1 Tax=Oligotropha carboxidovorans OM5 RepID=B6JAE3_OLICO Length = 311 Score = 274 bits (701), Expect = 4e-72, Method: Composition-based stats. Identities = 73/322 (22%), Positives = 141/322 (43%), Gaps = 25/322 (7%) Query: 1 MK-KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSP 59 M K++ LDLNLL+ + RS T AA +++++ AVS +L++LR DPLFV Sbjct: 9 MHQKNLARLDLNLLVVFDAIASARSTTLAATQLSLSQPAVSHALSRLRRLIGDPLFVRGR 68 Query: 60 LGLSPTPLMVSMEQNLAEWMQMSNLLL-DKPHHQTPRGLKFELAAESPLMMIMLNALSKQ 118 TP M + + + ++L + P F +AA M+ ++ L + Sbjct: 69 GRFVLTPRAEGMVLQVRDILNAVGVVLANAPFDPAENERTFRIAASDYTMLTIMPTLVRT 128 Query: 119 IYQRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSD 178 +++ P+A +++ + ++ + ++D + L LF + Sbjct: 129 LHRASPRAKLEVFSVGSQTIAQLESNDLD----------CTFWALKPPGAPYVTMPLFRE 178 Query: 179 VPCVWLRKDHPALH----QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMS 234 +L + HP LD ++ YPH+ + S+ +D L +GR+RTI ++ Sbjct: 179 SSKGFLDRRHPLAKPANRGRLTLDDYVGYPHVIAKFRDSNPSPVDVALAAVGRKRTIGLA 238 Query: 235 LPEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLW 294 F ++ + + L+AT P + + L LP+ + + ++L+W Sbjct: 239 SSSFIGNITALSGTN--LIATLPSRLSSIAESYGLKSFDLPIRIE-------DYTYSLVW 289 Query: 295 HKRNSHNPKIVWLRETIKNLYA 316 H+R +P +WLR+ I + Sbjct: 290 HQRTDADPACIWLRKVIAQTIS 311 >UniRef50_Q46T42 Regulatory protein, LysR:LysR, substrate-binding n=2 Tax=Burkholderiaceae RepID=Q46T42_RALEJ Length = 330 Score = 273 bits (700), Expect = 5e-72, Method: Composition-based stats. Identities = 67/318 (21%), Positives = 126/318 (39%), Gaps = 20/318 (6%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 D NLL +++ERSVT+AA ++ +T SA+S +L +LR +FDDPLFV + G+ Sbjct: 1 MHTDAFDYNLLTVFDAMLRERSVTRAAAQLGLTQSAMSHALNRLREFFDDPLFVKTAAGM 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQIY 120 +PT ++ + + + M + P F L ++ L L K++ Sbjct: 61 TPTIKAEALSETVLDVMTAMRTRVLPQASFDPATMQRTFTLCMTDMGELVFLPPLMKRLR 120 Query: 121 QRYPQATIKLRNWDYDSLD-AITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 P ++ ++ + G+ D+ + + P ++ + LF Sbjct: 121 VVAPHCKLRTLQVPVPQIEGLLASGDADLLLGS----------VQTAPESLFRQQLFMHG 170 Query: 180 PCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFE 239 + + + ++ F PH+++ + + D + G R I + P F Sbjct: 171 FVTIVSTKNRQVRDALTIEQFESMPHVTVSLAGRTSPSYDAAFESHGLRRNIYLHTPHFL 230 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 + Q L+AT P+ + + V + + WH R Sbjct: 231 SIPLLMEQ-QPELIATVPQELANVFSRYGIVRVV------KPPVVLPPYALSQYWHPRFH 283 Query: 300 HNPKIVWLRETIKNLYAS 317 H+P IVWLR+ +K + Sbjct: 284 HDPAIVWLRQLVKQTFDR 301 >UniRef50_C5CVL6 Transcriptional regulator, LysR family n=5 Tax=cellular organisms RepID=C5CVL6_VARPS Length = 327 Score = 273 bits (699), Expect = 6e-72, Method: Composition-based stats. Identities = 84/325 (25%), Positives = 140/325 (43%), Gaps = 25/325 (7%) Query: 1 MKKS--ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNS 58 M+ +DL+L+ L ++ +RSV++AA R+ + AVS +L +LR DPL V S Sbjct: 1 MRDQALFDKIDLHLIRVLHTVLTDRSVSRAAIRLGMYQPAVSAALKRLRELSGDPLLVRS 60 Query: 59 PLGLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTP--RGLKFELAAESPLMMIMLNALS 116 G+ PT + M + A ++ + +L P F +AA + + L L Sbjct: 61 GSGMVPTDAGLRMIEPAASILRAAEMLFSDARGFEPQSAATTFRIAASDYMDPLFLPMLV 120 Query: 117 KQIYQRYPQATIKLRNWDYDS--LDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEV 174 + + P I++ DS + G+VD+ P + Sbjct: 121 AHVKREAPLCQIEIHALTPDSDYHGHLALGQVDLVIGNWLKP----------PEDLHMAR 170 Query: 175 LFSDVPCVWLRKDHPALHQTWNLDTFLRYPHISICW-EQSDTWALDNVLQELGRERTIAM 233 LF D + +DHPA+ + W+L+T+L HI+ +D +L ELGR+R I Sbjct: 171 LFGDEVVSLVNQDHPAVRRGWDLETWLAAEHIAPTPMHPGGRGIIDQMLDELGRQRNITA 230 Query: 234 SLPEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLL 293 F M A L+L T +YC+ + + ++ P+ + L Sbjct: 231 RCAHFSLIPDMVASS-LLVLTTGRQYCERFAARLPVKILECPVALPRLM-------YYQL 282 Query: 294 WHKRNSHNPKIVWLRETIKNLYASM 318 WH+R + WLRE IK++ AS+ Sbjct: 283 WHERTHSSSSARWLRECIKDVAASL 307 >UniRef50_B7V4S2 Probable transcriptional regulator n=7 Tax=Pseudomonas aeruginosa RepID=B7V4S2_PSEA8 Length = 304 Score = 273 bits (699), Expect = 7e-72, Method: Composition-based stats. Identities = 69/318 (21%), Positives = 123/318 (38%), Gaps = 20/318 (6%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 + +DLNLL+ L L+ ER V++AA+R+ ++ AVS +L +LR F DPL V + Sbjct: 5 HDLRRIDLNLLVVLDALLSERHVSRAAQRLAMSQPAVSHALGRLRELFGDPLLVRVKSRM 64 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLL-DKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQ 121 T L + + L + ++ F L ++L AL +Q Sbjct: 65 QLTSLALELAPKLQASLDQVRGVIGGPTFEPVRSRRHFRLGMSDYGAWVVLPALLRQQQA 124 Query: 122 RYPQATIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 P + + ++ + G++D + LP + LF + Sbjct: 125 LAPGVSFGIVQEPRLETARQVAEGQLDCALG----------VFPLLPEGVRARRLFEERF 174 Query: 181 CVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQ 240 R+ +LD +L H+ + + + +D+ L++ G R +A++LP F Sbjct: 175 VCVCRRSLFDRPDGLSLDRYLAARHVRVSLQDNPAEEVDSALEKRGLRRQVALTLPHFTV 234 Query: 241 SLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 + + A D L+L A R + +L L PL + +W Sbjct: 235 APALLAGTD-LVLTIAERTLERLRLPEELALCEPPLAIP-------RFDYVQIWRGDAER 286 Query: 301 NPKIVWLRETIKNLYASM 318 WLRE I+ + Sbjct: 287 EAAGAWLREQIQAAARKI 304 >UniRef50_B7VQ45 Transcriptional regulator n=8 Tax=Vibrionales RepID=B7VQ45_VIBSL Length = 311 Score = 273 bits (699), Expect = 7e-72, Method: Composition-based stats. Identities = 94/312 (30%), Positives = 139/312 (44%), Gaps = 9/312 (2%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 KS+ D+NLLLCL +L++ERSV+K A+R+ ++ SAVSK L KLRA FDDPLF GL Sbjct: 5 KSLLKCDMNLLLCLHVLIEERSVSKTAERLFLSQSAVSKQLTKLRALFDDPLFERESKGL 64 Query: 63 SPTPLMVSMEQNLAEWMQMSNLL-LDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQ 121 PTP +++ + + + L + + F + + Sbjct: 65 FPTPKALALAPKIHQILLQIEKLTVPEVFDPKDSERTFTIDLVETAYTAIYPHFMPTALA 124 Query: 122 RYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPC 181 P TI W DS + + EVD G E R+ + +P +DY L D Sbjct: 125 DAPHITINSSTWSSDSFKRLLKREVDFGIGIFELDERASTHVQCIPDELDYVELCLDYSV 184 Query: 182 VWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQS 241 +R DHPAL + WNL TFL+Y HI + + W L VL E A ++ + + Sbjct: 185 CLMRNDHPALQEEWNLGTFLKYRHIQLVTGGAGDWLLMEVLNSKQLEINKAANVSDITSA 244 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 + + Q D L+ + Y +L + +P+ + LLWHK Sbjct: 245 IKLCKQSDLLM-CYPYNSVRDYIDSGELVMKPVPVDL-------VPGGLFLLWHKYFDSE 296 Query: 302 PKIVWLRETIKN 313 P WLR+ I Sbjct: 297 PSHKWLRDLIIE 308 >UniRef50_D1RUJ7 Transcriptional regulatory protein n=1 Tax=Serratia odorifera 4Rx13 RepID=D1RUJ7_SEROD Length = 313 Score = 273 bits (698), Expect = 8e-72, Method: Composition-based stats. Identities = 55/318 (17%), Positives = 121/318 (38%), Gaps = 19/318 (5%) Query: 1 MKKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPL 60 M+ L +N+L L ++ R+++ AA+++N + +S+ LA+LR F DPL V Sbjct: 1 MRTQFAALSINMLQVLHAVLTTRNLSHAAEKLNSSQPQLSRQLAQLREAFGDPLLVRHGR 60 Query: 61 GLSPTPLMVSMEQNLAEWMQMSNLLLD-KPHHQTPRGLKFELAAESPLMMIMLNALSKQI 119 +P + L + + L F A+ + ML L + Sbjct: 61 EYVLSPRGQEIILPLEKLINELKELSQKPEFEPLLCSRCFRFASSDYVAEHMLPQLVDYL 120 Query: 120 YQRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 P+ +++ W + + E+D+ ++ P + +L DV Sbjct: 121 QTVAPKVSVEYFTWKPNDYPLLANAELDLA----------TTMIKEAPSGLRGRILGEDV 170 Query: 180 PCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFE 239 P + H + + + H+ + +D L+E G R +A+++P F Sbjct: 171 PVCVMSARHVLAGKALEAKDYASWRHVRVSGGGDKDSFIDRELKEYGIYRQVALTVPFFS 230 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 ++ + + + LL+ + + ++ + + + ++WH+R Sbjct: 231 AAMEVVSSSN-LLVTIPKHIAIMMAGKYNVTWCSIDFVKESHR-------YWMIWHERTH 282 Query: 300 HNPKIVWLRETIKNLYAS 317 P+ W R ++ + A Sbjct: 283 MAPEHKWFRNVVREIVAG 300 >UniRef50_B1J7P4 Transcriptional regulator, LysR family n=5 Tax=Pseudomonas RepID=B1J7P4_PSEPW Length = 314 Score = 273 bits (698), Expect = 8e-72, Method: Composition-based stats. Identities = 79/320 (24%), Positives = 135/320 (42%), Gaps = 22/320 (6%) Query: 1 MKKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPL 60 M + +L L L L L+Q ++++ AA+R+ V+ SA+S+ LA LR FDDPL V Sbjct: 1 MNPTFASLSLAHLRTLDCLLQLKNLSHAAERLGVSQSALSRQLAHLREAFDDPLLVRQGR 60 Query: 61 GLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPR--GLKFELAAESPLMMIMLNALSKQ 118 G + ++ + L + ++ L +P P +F LAA + ML L Sbjct: 61 GYVLSEYGQALVEPLRQVLEELQ-ALRQPAAFDPARCERRFCLAASDYVAEHMLPLLVAA 119 Query: 119 IYQRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSD 178 + Q P +I R W + GE+D+ L P + +L D Sbjct: 120 LEQEAPGVSIDYRTWQAGQYALLASGEIDLA----------TTLFDESPANLHGRLLGED 169 Query: 179 VPCVWLRKDHPALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPE 237 +R+DHP + + D +L + H+ I +D L+ G +R I++ +P Sbjct: 170 RAVCLMRRDHPLTACEVLSQDDYLAFKHVRISGGGDKDSFIDRHLRTQGLQRRISLEVPF 229 Query: 238 FEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKR 297 F ++ + L + +LH L PL F E Q+ + ++WH+R Sbjct: 230 FSATVQVVGNS-QALATVPEHIARQLCRLHGLA--WRPLGFVEHTQR-----YWVVWHQR 281 Query: 298 NSHNPKIVWLRETIKNLYAS 317 + + WLR + L+ Sbjct: 282 LQASAEHRWLRNRVFELWRQ 301 >UniRef50_Q5LKP3 Transcriptional regulator, LysR family n=1 Tax=Ruegeria pomeroyi RepID=Q5LKP3_SILPO Length = 324 Score = 272 bits (697), Expect = 9e-72, Method: Composition-based stats. Identities = 72/319 (22%), Positives = 129/319 (40%), Gaps = 24/319 (7%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 + LDLNLL+ + + +++ AAKR+NV+ +S +LA+LR DPLF+ S G+ Sbjct: 1 MDLRKLDLNLLVTFEAIYTAGNISHAAKRLNVSQPTISNALARLRDTVGDPLFIRSGRGV 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQIY 120 +PTP M + + +QM P F + L I++ L + + Sbjct: 61 APTPRATGMIGPVRDALQMIQSGFGDDERFDPSTTRRNFRIVVLDMLEPILMPPLVRAV- 119 Query: 121 QRYPQATIKLRN-WDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 Q Y T+++ D+ + + G +D+ + + I+ E + + Sbjct: 120 QDYRSVTLEMLPVMDFPIAEGLNDGSLDLALTTFDPQ----------HGDIECEQVGAAK 169 Query: 180 PCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFE 239 + RK HP + H+++ + +D VL+ +R I + F Sbjct: 170 IVIVARKGHPRIKGEMTPALVSEIGHVALIPKIRALSRVDEVLRYAKIDRHIVYMVTRFW 229 Query: 240 QSLFMAAQPDNLLLATAP-RYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRN 298 + A D L+A P + + + L + +P F E ++W KR+ Sbjct: 230 SFPHILANSD--LIAMMPGDFAAHAALFYPLDIFPVPFEFPEQ-------HIYMIWKKRH 280 Query: 299 SHNPKIVWLRETIKNLYAS 317 +P WLRE I Y Sbjct: 281 GLDPGHTWLREKIVEAYRE 299 >UniRef50_Q210Z5 Transcriptional regulator, LysR family n=2 Tax=Alphaproteobacteria RepID=Q210Z5_RHOPB Length = 301 Score = 272 bits (696), Expect = 1e-71, Method: Composition-based stats. Identities = 72/308 (23%), Positives = 134/308 (43%), Gaps = 21/308 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 LDLNLL+ L L+ E SV AA R+N++P A+S+ LA++R +DP+ V + GL TP Sbjct: 10 LDLNLLVTLDALLSEGSVAGAANRMNLSPPAMSRQLARIRHLMNDPVLVRAGRGLVATPR 69 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQIYQRYPQ 125 ++ + + +Q + L+ P F + + + A+ + + Q+ P Sbjct: 70 AEAVRAQVRQLVQDAEGLVRGNADLDPATIERTFTIRSSDGFVGTFGAAIVELVVQQAPN 129 Query: 126 ATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 A ++ + +D++ G VD+ ++ + I + LF D +R Sbjct: 130 ARLRFVGEGNEDVDSLRDGRVDLDIG----------VIDGMGPEIRLQTLFRDRYIGVVR 179 Query: 186 KDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMA 245 DHP +T ++ F+ YPH+S+ +D L G RT+++++ L + Sbjct: 180 ADHPLAQETVTIENFVAYPHVSVSRRGRFEGPVDTALALQGMRRTVSVAVANVADGLSIV 239 Query: 246 AQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIV 305 ++ D+++L Y H F+ P ++ WH R + Sbjct: 240 SRSDHIVLLPGRIAAWYRRDFHG---------FELPVVTDELPPISIAWHPRFEKDAAHR 290 Query: 306 WLRETIKN 313 WLR ++ Sbjct: 291 WLRTCVRE 298 >UniRef50_Q1MWN1 LysR-type regulatory protein n=1 Tax=Sphingomonas sp. A4 RepID=Q1MWN1_9SPHN Length = 302 Score = 272 bits (696), Expect = 1e-71, Method: Composition-based stats. Identities = 73/316 (23%), Positives = 125/316 (39%), Gaps = 21/316 (6%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 I +DLNLL + + Q R V +AA+ + ++ AVS +L KLR +D LFV + G+ P Sbjct: 4 IRDVDLNLLRVFECVFQTRKVVEAAEILGISQPAVSNALKKLRELLNDELFVRTRSGMIP 63 Query: 65 TPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQIYQR 122 T + + + ++ ++ + ++ PR F +A M L I Sbjct: 64 TQYAMQLAEPISYALKTLEIAIEASESFDPRRDKRHFVIATSDLGDMYFGPKLISHIRDI 123 Query: 123 YPQATIKLR-NWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPC 181 TI+ N +++ GEVDI R + + LF Sbjct: 124 SQDITIEFVGNSRPHIFESLENGEVDILLGFRPDLITNMFVF----------RLFYQGWR 173 Query: 182 VWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQS 241 + RKDHP + L I + E S + +++ L ++G +R I + F Sbjct: 174 ILARKDHPIFSSKAPREDLLACRWIGVRSEGSGSASVNAELLKVGMDRNIVVWTSNFGTL 233 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 + A D L A P L ++P P D + + +WH + ++ Sbjct: 234 APLLAVGD--LAACVPEIYTTVID-EAFGLKSMPFPVDLPKH-----SISSVWHSKAHND 285 Query: 302 PKIVWLRETIKNLYAS 317 P WLR+ + L+ Sbjct: 286 PANQWLRQQVSILFKE 301 >UniRef50_A3VAM0 Nodulation protein d1 n=1 Tax=Rhodobacterales bacterium HTCC2654 RepID=A3VAM0_9RHOB Length = 312 Score = 272 bits (696), Expect = 1e-71, Method: Composition-based stats. Identities = 70/322 (21%), Positives = 129/322 (40%), Gaps = 21/322 (6%) Query: 1 MKKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPL 60 M LDLNLL+ L +L++E++V++AA+++ ++ SA S +LA+LR +F+D L V Sbjct: 1 MDMRFKGLDLNLLVALDVLLREKNVSRAAEKLFLSQSATSGALARLREYFNDDLLVQVGR 60 Query: 61 GLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQ 118 + TP ++ + + + + + P + + + + +L ++ Sbjct: 61 QMVLTPRATALSGKVRSALVQIDGTIIQSPEFDPSTAVRILRIISSDFITISVLREAVRE 120 Query: 119 IYQRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSD 178 I + P TI ++ + I RGEVD+ + E F+D Sbjct: 121 IGKSAPGLTIDIQQPANKPHEKIERGEVDLLLMPELY----------ISPDHPSEQFFTD 170 Query: 179 VPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQ-ELGRERTIAMSLPE 237 V + T D F H ++ +E +Q + GRER IA+ + Sbjct: 171 DYVVIAWSGNTQFGDTITEDQFFAARHATVMFESHTPSYEAWFIQNKDGRERDIAIVVGS 230 Query: 238 FEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKR 297 F FM D L L + + L L+ P+ + ++ WH Sbjct: 231 FSALPFMIEGTDYLAL-MHRSMADIFARQMPLRLLRCPIDIP-------PLVESIQWHTY 282 Query: 298 NSHNPKIVWLRETIKNLYASMA 319 + + + W+RE I +A Sbjct: 283 SDGDECLAWVREKIHEQARGLA 304 >UniRef50_Q13GK2 Transcriptional regulator, LysR family n=1 Tax=Burkholderia xenovorans LB400 RepID=Q13GK2_BURXL Length = 311 Score = 272 bits (696), Expect = 2e-71, Method: Composition-based stats. Identities = 81/321 (25%), Positives = 133/321 (41%), Gaps = 24/321 (7%) Query: 1 MKKSIT--TLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNS 58 M+++ TLD+ LLL L++ERSV++AA + +T SAVS+ L +LR F DPLF+ + Sbjct: 1 MRRNPRVDTLDIKLLLVFDALLRERSVSRAADDVGLTQSAVSQKLGRLRDIFSDPLFIRT 60 Query: 59 PLGLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALS 116 G+ PTP + + LAE + L+ P F +A + L + Sbjct: 61 ANGMEPTPHALVLSAQLAELLARWKSLVSSQQRFEPATAERNFRVALSDGMSYHCLPPVV 120 Query: 117 KQIYQRYPQATIKLRNWDYDSLDA-ITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVL 175 ++I + P I + + I G D+ + P+ I L Sbjct: 121 RRIREIAPNLRITIVHVGPRGGQREIESGSADLALG----------VFQQPPIGISTCEL 170 Query: 176 FSDVPCVWLRKDHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMS 234 F K++P L T + D +L HI++ ++ +++ LG +R IA+ Sbjct: 171 FRYTLQCVADKNNPRLKQGTMSRDEYLEASHIAVGENNVPGTLVEVIVEALGLKRKIALV 230 Query: 235 LPEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLW 294 P F + D L+ T P Q L P+PF S+ + +W Sbjct: 231 TPHFVSIPNLVLGTD--LIGTFPSSAQD-AYPFSNQLCFFPIPFPISESIAM-----AMW 282 Query: 295 HKRNSHNPKIVWLRETIKNLY 315 H R +P +WLR + Sbjct: 283 HPRFDGDPGHMWLRNLFADTL 303 >UniRef50_Q13JD9 Transcriptional regulator, LysR family n=1 Tax=Burkholderia xenovorans LB400 RepID=Q13JD9_BURXL Length = 305 Score = 272 bits (696), Expect = 2e-71, Method: Composition-based stats. Identities = 65/316 (20%), Positives = 123/316 (38%), Gaps = 22/316 (6%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 + DLNL+ + + SV+ AA+R+N+T VS +L++LR DPLF + G+ Sbjct: 6 MQTASTDLNLIRAFVAIYETGSVSAAARRLNLTQPTVSYALSRLRTLLHDPLFSRTREGM 65 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQT--PRGLKFELAAESPLMMIMLNALSKQIY 120 +PT + + + + + + F +A + L + +++ Sbjct: 66 APTFNASQLYETFRQALDRIEGAIAATRYFDAATSTRCFRIALSDLGELYFLPRMVERLQ 125 Query: 121 QRYPQATIKLRNWD-YDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 + P +++ D + + + G++D L + LFS+ Sbjct: 126 RTAPGVELEVVQLDVERTAEWLNTGQIDAAVGN----------LHLVGGKARRRYLFSET 175 Query: 180 PCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFE 239 + HP + T +L ++R H+ + S +++V+ +G R IA+ +P F Sbjct: 176 YSCLVSHRHPWIGTTLSLGDYVRAKHV-VGASSSGHRLVEDVMTGMGLSRKIALRVPHFT 234 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 + + A D L+L R Y + + LP+P D L W R + Sbjct: 235 NVVDVVAGSD-LVLTLPARVANVYQSTGTVRALPLPVPVD-------PFDVNLYWQDRAT 286 Query: 300 HNPKIVWLRETIKNLY 315 WL E I Sbjct: 287 DLSAQKWLCEIIAETL 302 >UniRef50_A1U2R6 Transcriptional regulator, LysR family n=3 Tax=Marinobacter RepID=A1U2R6_MARAV Length = 300 Score = 271 bits (694), Expect = 2e-71, Method: Composition-based stats. Identities = 75/315 (23%), Positives = 132/315 (41%), Gaps = 22/315 (6%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 ++ DLNLL + +E S+T+AAK +++T A+S SLA+LR F+DPLF + Sbjct: 1 MALNRPDLNLLHVFDTIYREGSLTRAAKALHLTQPAISHSLARLRDHFNDPLFTRQGNQM 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFE--LAAESPLMMIMLNALSKQIY 120 PTPL +++ + +++ H P + L L L L ++ Sbjct: 61 VPTPLARRFLESMRPGLNQIQSAVNQFHAFDPASQRKTYALGLRDVLESTFLPQLISKLA 120 Query: 121 QRYPQATIKLRNWDYDSLD-AITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 YP ++ + ++ + G++D ++L + +E+L D Sbjct: 121 P-YPDMEVQSQRVARRDMETQLAAGKLDFAI----------DVLLPVSNQTSHELLRQDR 169 Query: 180 PCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFE 239 V RK HP + Q ++ ++L HI + D L G +RTI + + Sbjct: 170 LVVLARKGHPVIAQGLDMASYLEARHILVSSRAEGPGIEDFELSRHGAQRTIRLRCQHYY 229 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 + + D LLL Y + Q + ++A P+ + L WHK Sbjct: 230 AACRVVESSD-LLLTMPETYARIIAQNTDIEVLAPPVEMP-------SIDVHLYWHKAYE 281 Query: 300 HNPKIVWLRETIKNL 314 P +VW R+ ++NL Sbjct: 282 QEPALVWFRDLLRNL 296 >UniRef50_B7RYN1 Transcriptional regulator, LysR family protein n=1 Tax=marine gamma proteobacterium HTCC2148 RepID=B7RYN1_9GAMM Length = 303 Score = 271 bits (694), Expect = 2e-71, Method: Composition-based stats. Identities = 69/320 (21%), Positives = 136/320 (42%), Gaps = 25/320 (7%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 ++ ++DLNLL ++ E SVT+AA++I ++ A+S +L + R D LF + GL Sbjct: 1 MNLRSVDLNLLTVFDAVITEGSVTRAAEKIGMSQPAMSIALTRFRHIAKDELFERTGRGL 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQT--PRGLKFELAAESPLMMIMLNALSKQIY 120 PTP + + + + + L+ F + ++ML L +++ Sbjct: 61 RPTPRALELAAPIRRALDIVTDALEHGTDFDMSRSDRSFSVVLSGIGEIVMLPTLMRRLE 120 Query: 121 QRYPQATIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 + I R+ D L + G VD+ ++ I + + Sbjct: 121 STGSRININTRHVAHGDMLKEMHFGNVDL----------YMWIVPIESSEIICTQIGNTS 170 Query: 180 PCVWLRKDHPALHQTWNLDTFLRYPHISICWEQS-DTWALDNVLQELGRERTIAMSLPEF 238 +R DHP + + +++ F H++ + +D L LG +R +MS+ + Sbjct: 171 EVCLVRADHPYVGDSLSVNEFAALRHVTFHMPGTYGPSIIDRELWRLGLKREHSMSVHSY 230 Query: 239 EQSLFMAAQPDNLLLATAPRYC-QYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKR 297 + + +Q D ++ T PR +++ ++H L +V PL + P +LW K Sbjct: 231 FDAPRVLSQTD--MVCTMPRVLGRHFARVHGLKMVRSPLQLE--------FPVFMLWPKA 280 Query: 298 NSHNPKIVWLRETIKNLYAS 317 + WLRET+ +++ Sbjct: 281 AEKDKGHQWLRETLIDIFKQ 300 >UniRef50_C9PC13 Transcriptional regulator LysR family n=1 Tax=Vibrio furnissii CIP 102972 RepID=C9PC13_VIBFU Length = 310 Score = 271 bits (694), Expect = 2e-71, Method: Composition-based stats. Identities = 76/321 (23%), Positives = 138/321 (42%), Gaps = 22/321 (6%) Query: 1 MKKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPL 60 MKK +DLNL+ + + +SV A R+N++ SA S SLA+LR+ +D LF+ Sbjct: 1 MKK-FDNIDLNLMKVFYYVYETQSVQMTADRLNISQSACSHSLARLRSRLNDELFIRING 59 Query: 61 GLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPR--GLKFELAAESPLMMIMLNALSKQ 118 + PT + Q++ +++ L+ P F ++ ++ L+ Sbjct: 60 KMIPTNQAEQLAQSIQPALELLYSGLNTATPFDPAVGQHHFVISGYDFSAWCVMPTLTAY 119 Query: 119 IYQRYPQATIKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFS 177 + + +P T++L D + + GE+D+ +S + +++ S Sbjct: 120 LAEHFPNITVRLVQSDKQIPTEHLESGEIDLSLGFDHEAEQSNHIGNAI--------WQS 171 Query: 178 DVPCVWLRKDH--PALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSL 235 C+ + H + +LDTFL YPH+ + +D L +L ++R +A++L Sbjct: 172 GQYCIAMDNQHDALMAGRPLDLDTFLAYPHVLVTPWNEPRGIVDATLGKLNKKRQVAVTL 231 Query: 236 PEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWH 295 P + F+ + L A Y + QL VA P+P + L WH Sbjct: 232 PSVLSAPFLLKGTNYFLAA-PESYLETLADTLQLAFVAPPIPIP-------QYHIKLYWH 283 Query: 296 KRNSHNPKIVWLRETIKNLYA 316 K +PK+ WL + +L A Sbjct: 284 KVREKDPKVNWLIHRLCDLAA 304 >UniRef50_Q1N663 Regulatory protein, LysR:LysR, substrate-binding n=1 Tax=Bermanella marisrubri RepID=Q1N663_9GAMM Length = 306 Score = 271 bits (693), Expect = 3e-71, Method: Composition-based stats. Identities = 72/312 (23%), Positives = 129/312 (41%), Gaps = 20/312 (6%) Query: 7 TLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTP 66 +DLNL + + E S+T+AA+R+N+T A+S +L++LR DDPLFV + PTP Sbjct: 2 KIDLNLFTVFEAIYLEGSLTRAAERLNLTQPAISHALSRLRERLDDPLFVRQGHKMRPTP 61 Query: 67 LMVSMEQNLAEWMQMSNLLLDKPHHQTPRGL--KFELAAESPLMMIMLNALSKQIYQRYP 124 L + ++ ++ N L + HH P + +A + +L + K + P Sbjct: 62 LAQKLIPDIQAALRQLNGALQQSHHFNPAEAEKTYRVAMRDVMEATLLPPVLKGLDNIAP 121 Query: 125 QATIKLRNWDYDSLDA-ITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVW 183 + + + +++ + GE+D ++L I + L +D V Sbjct: 122 NIQLASVHIERRDMESKLASGELDFVV----------DVLLPTSEQIYKKKLLNDELVVI 171 Query: 184 LRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 L + + + +LR HI + S +D L G R +A+ + + Sbjct: 172 YNPALSQLPEGFTEEEYLRAKHILVSTRASGPSLVDYALSAEGLNRNVALRCQHYYAACQ 231 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 +A DN +L T P H L LPF K + L WH+ + + Sbjct: 232 VA--SDNGMLLTMPSRYASILLQHFPTLQRSSLPF-----KTSSIDVYLYWHESLNEDGA 284 Query: 304 IVWLRETIKNLY 315 W R+ ++ + Sbjct: 285 NAWFRDMLQQVL 296 >UniRef50_A1VMI6 Transcriptional regulator, LysR family n=28 Tax=Bacteria RepID=A1VMI6_POLNA Length = 333 Score = 271 bits (693), Expect = 3e-71, Method: Composition-based stats. Identities = 69/299 (23%), Positives = 110/299 (36%), Gaps = 23/299 (7%) Query: 20 MQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSMEQNLAEWM 79 RSVT+AA+++ + VS LA+LR DPLFV +P G+ PTP ++ + E + Sbjct: 53 YNTRSVTRAAEQLGQSQPTVSIWLARLRRQLGDPLFVRTPEGMLPTPRTDALIATVREVL 112 Query: 80 QMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQIYQRYPQATIKLRNWDYDS 137 + L + P F + + +L L + PQ ++ D Sbjct: 113 EGLRRLSESESRFDPATAQRGFRIFMTDASHITLLPRLFSHVRALAPQVRLEAATIDARM 172 Query: 138 LDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPALHQTWNL 197 A+ GE D+ L+ L + LF HP + + + L Sbjct: 173 APALQSGEGDLALG----------LVPGLEAGFYQQTLFGQDWICLCNARHPRIGEMFTL 222 Query: 198 DTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQPDNLLLATAP 257 + HI I + LD L+ G R + + LP F + + D L+AT P Sbjct: 223 QDYAAEAHIGI-VSGTGYQLLDGALKSQGIARRVLLELPGFLGLAAILSTSD--LVATLP 279 Query: 258 RYC-QYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWLRETIKNLY 315 R+ + L ++ P WH R H+ WLR L+ Sbjct: 280 RHIGETLANAAGLRVLPCPFEIP-------GFTVKQYWHARYHHDAGNRWLRGVCAELF 331 >UniRef50_A1U8Q8 Transcriptional regulator, LysR family n=1 Tax=Marinobacter aquaeolei VT8 RepID=A1U8Q8_MARAV Length = 312 Score = 270 bits (692), Expect = 4e-71, Method: Composition-based stats. Identities = 78/323 (24%), Positives = 136/323 (42%), Gaps = 29/323 (8%) Query: 1 MKKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPL 60 MK + DLNLL L E++VT+A +R++++ +VS +L +LR F DPLF+ Sbjct: 1 MKLNY---DLNLLRTFHALYLEQNVTRAGERLHLSQPSVSAALGRLRELFKDPLFIRDRQ 57 Query: 61 GLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQ 118 + PT + + + + L+ +P FE+AA +++L AL+ Sbjct: 58 RMRPTETADHLFPVIEAALTDLDGLITSERDFSPATEQRHFEIAANDYFEVLILPALASV 117 Query: 119 IYQRYPQATIKLRNWDYDSLDA-ITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFS 177 + ++ P T+++R D +A I G D+ F + P + + + I+ Sbjct: 118 LREQAPGITLQVRRLSQDMSEAGIMSGTTDLAFGRQVDPPDNLVVREVILEGIE------ 171 Query: 178 DVPCVWLRKDHPALH-----QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIA 232 + +HP L D F RY H+ I + L+ +R +A Sbjct: 172 ----CLVGNEHPLLERLKGNGQMTRDDFERYAHVLIQPHTRLKSGIFKQLESQNLKRKVA 227 Query: 233 MSLPEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTL 292 +++ F + +L+ + CQ++ + + VA P+ FD PF L Sbjct: 228 LAVTYFMAVPALLEGS-SLIASLPTGLCQHFRRQFAVTPVAPPVAFDA-------FPFHL 279 Query: 293 LWHKRNSHNPKIVWLRETIKNLY 315 WH R +P WLRE I Sbjct: 280 SWHHRYQKDPAHRWLREQIIACC 302 >UniRef50_A3YHF6 Transcriptional regulatory protein n=2 Tax=Gammaproteobacteria RepID=A3YHF6_9GAMM Length = 308 Score = 270 bits (692), Expect = 4e-71, Method: Composition-based stats. Identities = 67/314 (21%), Positives = 132/314 (42%), Gaps = 19/314 (6%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 + DLNL++ +M+E+S+T AA + +T +VS +++++R + DPLFV G+ P Sbjct: 1 MAKTDLNLVVIFDAIMKEKSITSAADSLAMTQPSVSNAVSRMRHAWKDPLFVKEGRGIRP 60 Query: 65 TPLMVSMEQNLAEWMQMSNLLLDKP-HHQTPRGLKFELAAESPLMMIMLNALSKQIYQRY 123 TP + + +AE + N + F + I+ L I Q Sbjct: 61 TPYATKLWKRVAEPLAQINHAIAPEYFDPLTSKASFRIGITDGSASIVWPELRHIIEQEA 120 Query: 124 PQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVW 183 P I + D + +VD+ F + + I Y+ ++ + Sbjct: 121 PNINIYAVPYKVDGELLLNNADVDLVFDYYDGN----------SDEIFYKSMYENQFVTV 170 Query: 184 LRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 +R DH ++ L+ +++ H+ + +D+ L EL +R AM++ F ++ Sbjct: 171 MRADHELANEELTLERYIKSEHLLVSLSGDVCGIVDDKLAELNAKRRTAMTVNSFASAIN 230 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 + Q ++ P ++ LV P+P + + +L WH RN+H+ Sbjct: 231 LIKQTRLIITMPYPIIAEHLAAG---DLVLKPVPLELP-----SIKISLAWHSRNNHSQA 282 Query: 304 IVWLRETIKNLYAS 317 + WL + + + S Sbjct: 283 LKWLIKVLDRIIDS 296 >UniRef50_Q15XJ4 Transcriptional regulator, LysR family n=1 Tax=Pseudoalteromonas atlantica T6c RepID=Q15XJ4_PSEA6 Length = 299 Score = 270 bits (691), Expect = 5e-71, Method: Composition-based stats. Identities = 53/319 (16%), Positives = 131/319 (41%), Gaps = 23/319 (7%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 LDLNLL+ L L+ ER+VT+A +RI+++ S +S ++++LR +FDD LFV L Sbjct: 1 MRFKGLDLNLLVALDALIAERNVTRAGERIHLSQSGMSSAVSRLRQYFDDELFVQVGREL 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPR--GLKFELAAESPLMMIMLNALSKQIY 120 PT L ++ + + + + P + +AA M+++ + ++ Sbjct: 61 IPTSLTETLAKPVRRILVEMENTIISRPKFDPASDERCYRIAASELTTMVLMPTVISRLA 120 Query: 121 QRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 Q P + L D + +G++D+ ++ ++ ++ + Sbjct: 121 QDAPNIRLNLSTIGET--DLLDKGDIDLMIIPKQFTQ----------DGHPFDEIYQEGY 168 Query: 181 CVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQEL-GRERTIAMSLPEFE 239 +++ ++ + + + H+ + + +++ A D+ G R + + Sbjct: 169 KCICWQENTSIGEKITFEDYQSAGHVVVSYGKNNAPAFDSWFMSHYGISRRVEIMTSNLL 228 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 + + R Q +Q + ++ P+ + ++ +H+ Sbjct: 229 APPSLIIGTQRIA-TVHSRLAQIVSQSLPIRVLQPPIEIP-------PLTQSMQYHRNRE 280 Query: 300 HNPKIVWLRETIKNLYASM 318 ++ + WLR+ I ++ ++ Sbjct: 281 NDVGLSWLRQLIIDVAKTI 299 >UniRef50_A9FJR3 Transcriptional regulator, LysR family n=2 Tax=Sorangium cellulosum 'So ce 56' RepID=A9FJR3_SORC5 Length = 306 Score = 269 bits (690), Expect = 7e-71, Method: Composition-based stats. Identities = 64/316 (20%), Positives = 132/316 (41%), Gaps = 20/316 (6%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 + +DLNLL L ++ ER+VT+AA+R+ +T AVS +L +LR F+D L V ++P Sbjct: 9 LRAVDLNLLTVLDAVLTERNVTRAAERLGMTQPAVSSALNRLRLLFNDDLIVRRGKEMAP 68 Query: 65 TPLMVSMEQNLAEWMQMSNLLLDKPHHQT-PRGLKFELAAESPLMMIMLNALSKQIYQRY 123 TP +++ + + + + L F L ++L + + Q Sbjct: 69 TPRALALAGPIRKALDLIQASLAHTGAFDCTASRTFRLGITDIGEALLLPRFLQWLEQLG 128 Query: 124 PQATIKLRNWDYDSLD-AITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCV 182 + + SL + G++++ + ++ + Sbjct: 129 ARVRLDFCREPGTSLQNEMRLGKIELVL----------DHIAIPGEEFRRTRVLDLEFVT 178 Query: 183 WLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 +R+DHP + + LD ++ H+ I + T + + +GR R + + +P + Sbjct: 179 LVRQDHPTVGPSLTLDEYMALEHVIIEPREGQTNLAEQIQAAVGRARCVRVQVPRYLSMP 238 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 F+ +Q + + P + + Q + +V+ PLP +P ++WH +P Sbjct: 239 FIVSQSNLVCTLPLP-LARLFEQHFPVRVVSCPLPI-------QPIPLFMMWHACQDGDP 290 Query: 303 KIVWLRETIKNLYASM 318 WLR ++ L + + Sbjct: 291 AHEWLRRSLIELCSRV 306 >UniRef50_A9C385 Transcriptional regulator, LysR family n=2 Tax=cellular organisms RepID=A9C385_DELAS Length = 332 Score = 269 bits (690), Expect = 7e-71, Method: Composition-based stats. Identities = 85/316 (26%), Positives = 143/316 (45%), Gaps = 21/316 (6%) Query: 4 SITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLS 63 ++ ++DLNLL+ + L++ERSV KAA R+ +T SAVS +L +LR F+DPL + + G+S Sbjct: 16 NLRSIDLNLLVIFEALVEERSVGKAAARLGITSSAVSHALRRLRTQFNDPLLLRTAEGMS 75 Query: 64 PTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQIYQ 121 PTP V + ++ + ++ P F L + +++L L + Sbjct: 76 PTPEAVRLARSFRKAFSEIESAIEVSKGFDPATARRNFHLRLSDYVGVLLLPQLCIHLRA 135 Query: 122 RYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPC 181 P ++ ++++D E G R S R R +LS+ L D Sbjct: 136 VAPGISLSVQSFDGRQPSDRVEYE---GVEIRLSVSRGRSVLSA------SRRLLDDQWM 186 Query: 182 VWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQS 241 V +RKDHPA L+ +L H+ + + +D +L E G R + +P + Sbjct: 187 VLMRKDHPAAASPLTLEKYLEQGHLKVT--GVGSSIVDELLAERGLARRVMFQVPTWLGM 244 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 + + D L+A P + ++ L VA P+P E L + +WH RN H+ Sbjct: 245 VPVIESTD--LVAAMPAHW-MHSVLSGSNCVARPMPLPE-----LALSIDAVWHPRNDHD 296 Query: 302 PKIVWLRETIKNLYAS 317 W RE I ++ Sbjct: 297 AGHKWFRELIHQIFQE 312 >UniRef50_B6RAE8 Transcriptional Regulator, LysR family n=1 Tax=Pseudovibrio sp. JE062 RepID=B6RAE8_9RHOB Length = 307 Score = 269 bits (690), Expect = 8e-71, Method: Composition-based stats. Identities = 71/319 (22%), Positives = 131/319 (41%), Gaps = 16/319 (5%) Query: 1 MKK-SITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSP 59 M++ ++ +DLNLL+ L+ L++ R V+ AA +++++ AVS++L +LR +DPL V Sbjct: 1 MRQVNLRGVDLNLLVILEKLLETRHVSLAATQLHMSQPAVSRALQRLRDLLNDPLLVRIA 60 Query: 60 LGLSPTPLMVSMEQNLAEWMQMSNLLLD-KPHHQTPRGLKFELAAESPLMMIMLNALSKQ 118 T +++ L + ++ + + + L K+ Sbjct: 61 GDYELTERAAEIQRLLPSVLATIQDVIAKPEFDPATAQETIRFSGPELEVNLYGPPLLKR 120 Query: 119 IYQRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSD 178 + Q P ++L++ + + + GE SG+E + + + L Sbjct: 121 MKQEAPGMKLELKSNIRNQFEPLENGEAHFVLSGQEPSAATSQ--------LHRISLGRF 172 Query: 179 VPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEF 238 + KDHP + +L+ +L HIS+ S +D L +GR+R +A+ + F Sbjct: 173 SYVCLMSKDHPLAGKPISLNDYLAQDHISVMITGSGQSIIDEKLAAMGRKRNVAVKIGSF 232 Query: 239 EQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRN 298 ++ Q D L L P +A P+P K F L WH+ Sbjct: 233 FAAMHFCGQTDLLFL--VPSIFDK-KIYEGHNTIASPVP---DFLKDHHQEFFLYWHECY 286 Query: 299 SHNPKIVWLRETIKNLYAS 317 H+P I W R +K Sbjct: 287 HHDPMIQWTRTLMKETTRQ 305 >UniRef50_A4GJC2 Transcriptional regulator LysR family protein n=1 Tax=uncultured marine bacterium EB0_49D07 RepID=A4GJC2_9BACT Length = 303 Score = 269 bits (689), Expect = 8e-71, Method: Composition-based stats. Identities = 68/321 (21%), Positives = 133/321 (41%), Gaps = 26/321 (8%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 I++ DLNL + + + E S+TKAA+ + +T AVS +L++LR FDD LFV + G+ Sbjct: 1 MKISSFDLNLFVIMNSIYTEGSLTKAAEVVGITQPAVSNALSRLREKFDDELFVRTGSGM 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTP--RGLKFELAAESPLMMIMLNALSKQIY 120 PT ++ Q++ +Q+ +++P P F ++ +L L +I Sbjct: 61 VPTQKTENIIQDIQNALQLMQKSVNEPDEFNPKTSERTFRISLGDINEGRILAILMSKIG 120 Query: 121 QRYPQATIKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 + P I+ D + A+ E+ + + +FSD Sbjct: 121 KSAPHVKIESYYSARDQVPHALATNELSFAVDPFIPNSKDTN----------SMKVFSDK 170 Query: 180 PCVWLRKDHPALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEF 238 V R +H + NL+ L+ +I+I + ++ +Q++ + +A+ + Sbjct: 171 FVVAHRANHDVSKIENLNLEEMLKLKYINISNRKRGASVVEMEMQKMQLQPEMALRAQHY 230 Query: 239 EQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRN 298 + + D LL + + + H L V LP +Q L+WH + Sbjct: 231 LVTPEIVRSSDLCLLC-----AETFAKKHGLSYVELPFKVPALEQ-------YLIWHNSD 278 Query: 299 SHNPKIVWLRETIKNLYASMA 319 ++ +W+R I + + Sbjct: 279 DNDGSHIWMRNLIAESFKEVG 299 >UniRef50_B9B1S8 Transcriptional regulator, LysR family n=1 Tax=Burkholderia multivorans CGD1 RepID=B9B1S8_9BURK Length = 319 Score = 269 bits (689), Expect = 9e-71, Method: Composition-based stats. Identities = 76/317 (23%), Positives = 134/317 (42%), Gaps = 22/317 (6%) Query: 6 TTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPT 65 LDLNLL Q +++ERS+TKA +R+ ++ AVS SL +LR FDDPLFV + G+ PT Sbjct: 18 DHLDLNLLRVFQAIVEERSLTKAGERLALSQPAVSYSLGRLRTLFDDPLFVRTRAGMQPT 77 Query: 66 PLMVSMEQNLAEWMQMSNLLLDKPHHQTPR--GLKFELAAESPLMMIMLNALSKQIYQRY 123 P+ + + + + + M + L P F L+ M L A+ + + +R Sbjct: 78 PVALELAGIVGKALDMVRVALRYAERFDPATSTRTFRLSLSDAGEMAYLPAICRALRERA 137 Query: 124 PQATIKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCV 182 P+ T+ ++ +++ +A+ +D L L +++LF + Sbjct: 138 PRVTLSVQPMPVEAIEEALRASRLDFAIGN----------LPELMPRTRHQLLFEETYVC 187 Query: 183 WL-RKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQS 241 R+ T L+ F+R H+++ + ALD+ L+ G R +A+ +P F Sbjct: 188 MTGRRRGLPSGTTLTLEQFVRAAHVNVKSVEHSHHALDDALRAQGVGRNVALEVPHFVAL 247 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 + D R Q N+ + L P T+ WH+ + Sbjct: 248 PGVLQVTDLYA-TLPKRLAQILNRDNAFRLY-------ALPVPLPPAPVTMHWHEHFHED 299 Query: 302 PKIVWLRETIKNLYASM 318 I W+R + + Sbjct: 300 EGITWMRALLAEIVERF 316 >UniRef50_A5WDE8 Transcriptional regulator, LysR family n=1 Tax=Psychrobacter sp. PRwf-1 RepID=A5WDE8_PSYWF Length = 302 Score = 269 bits (688), Expect = 1e-70, Method: Composition-based stats. Identities = 80/314 (25%), Positives = 137/314 (43%), Gaps = 21/314 (6%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 + +D+ LLL Q + Q+ +++KAA+++++ A S L KLR FDDPLFV + P Sbjct: 1 MFDIDVRLLLLFQAIYQQNTISKAAQKLDIGQPAASLGLNKLRQHFDDPLFVRVGNQMQP 60 Query: 65 TPLMVSMEQNLAEWMQMSNLLLDKPHHQTP--RGLKFELAAESPLMMIMLNALSKQIYQR 122 T ++ + +Q + D HH P +F ++ MI++ L K + Q Sbjct: 61 TQTAQNLFPLVNNALQHIRAVNDYTHHFEPKNSSRRFHISMTDISHMIIVPKLIKYLKQH 120 Query: 123 YPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCV 182 P + + + D+ ++ GE+D+ + L + F V Sbjct: 121 APHTKLDISAINSDTPSRMSSGEIDLAIGY----------IPHLEAGFFQQTFFEQHYSV 170 Query: 183 WLRKDHPALHQ-TWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQS 241 +R+DHP L Q T L+ + + H + + + L++ L+ +R IA++LP + Sbjct: 171 VVRQDHPRLTQNTLTLEAYQQEQHADVISSGTGHYLLEDHLRRRHIKRHIAITLPTYLGV 230 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 + Q D L+AT P L LPLP D + + WH+R N Sbjct: 231 GLIIQQTD--LVATLPDKLAKLLLQEN-RLHTLPLPLDIPKYQ-----VKQHWHERMHAN 282 Query: 302 PKIVWLRETIKNLY 315 P WLR+ L+ Sbjct: 283 PDNQWLRQVCYALF 296 >UniRef50_D0LUZ7 Transcriptional regulator, LysR family n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LUZ7_HALO1 Length = 306 Score = 268 bits (687), Expect = 2e-70, Method: Composition-based stats. Identities = 67/318 (21%), Positives = 131/318 (41%), Gaps = 22/318 (6%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 I +D NLL+ L L++E SVT+AA R+ +T SA+S +L +LR DPL V + + Sbjct: 1 MYIYGIDANLLVSLDALLREASVTRAAHRVGITQSAMSHALGRLRDHLGDPLLVRAGRNM 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPR--GLKFELAAESPLMMIMLNALSKQIY 120 T S+ ++ ++ + + P F L A +++ + + + Sbjct: 61 VLTAKAESLAPRVSVLVEEMSRVFAPDEEFEPAALRRGFALRATDHAQFVLMPEVDRLLR 120 Query: 121 QRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 P + + ++ + + + D+ S P I + L +D Sbjct: 121 AEAPGVDLVVTALSGGAVAPLRQAQSDLTLGT----------FSDHPSDIHSQALLTDRF 170 Query: 181 CVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQ 240 +R DHPA+ + + + HI + + +D VL ELG R I+ +P Sbjct: 171 VCLVRGDHPAIARGLGVAQYAAMTHIHV--GPAQLGVVDRVLGELGIARRISRVVPHVLV 228 Query: 241 SLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 + + A D + + + R Q ++ ++ P+P ++ WH+R+ Sbjct: 229 APLLIADSDAV-VTMSERLAQRALPGAEVAMLEPPVPLP-------PCTLSMAWHERHDA 280 Query: 301 NPKIVWLRETIKNLYASM 318 +P WLR+ + + + Sbjct: 281 DPAHRWLRDAVLRAASHL 298 >UniRef50_Q1LD16 Transcriptional regulator, LysR family n=8 Tax=Proteobacteria RepID=Q1LD16_RALME Length = 315 Score = 268 bits (685), Expect = 2e-70, Method: Composition-based stats. Identities = 74/322 (22%), Positives = 128/322 (39%), Gaps = 27/322 (8%) Query: 4 SITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVN--SPLG 61 +DLNLL+ L L+ ER+VT A+R+ +T AVS LA+LR FDDPL + + G Sbjct: 11 DFKGVDLNLLVTLDALLDERNVTHTAERLGLTQPAVSAQLARLRRIFDDPLLIPADTGRG 70 Query: 62 LSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTP--RGLKFELAAESPLMMIMLNALSKQI 119 + + +++ + L ++ ++ + P +F +AA + +L +++ Sbjct: 71 MIASARALALLEPLHVALKDLESVVHRRPEFDPFVDTRQFVIAASDNATSTLGMSLLERL 130 Query: 120 YQRY-PQATIKLRN-WDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFS 177 + + + + GEVD+ +P + L Sbjct: 131 SIVAGTGVRVAFVHGRQAEIAAQLESGEVDLLIGSE----------RMVPPTMRARKLLD 180 Query: 178 DVPCVWLRKDHPALHQTWNLDTFLRYPHISIC-WEQSDTWALDNVLQELGRERTIAMSLP 236 + + RK HP + LD + + H+ + S +D LQ LGR R +A+S+ Sbjct: 181 ETFVMAQRKSHPRGARRLTLDMYCKLRHVLVSTSGGSFFGFVDEQLQLLGRSRDVAVSVQ 240 Query: 237 EFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHK 296 F + + D + R Y L ALP + WH Sbjct: 241 AFTVVPDLLRRSDYVC-TMPARLAARYADW--LDAFALPFDVP-------GFSLSAAWHP 290 Query: 297 RNSHNPKIVWLRETIKNLYASM 318 RN +P I WLR T+ + + Sbjct: 291 RNHADPAIAWLRSTLAEVAGQL 312 >UniRef50_D0FZR1 LysR-type transcriptional regulator n=2 Tax=Rhodococcus RepID=D0FZR1_9NOCA Length = 311 Score = 268 bits (685), Expect = 2e-70, Method: Composition-based stats. Identities = 81/321 (25%), Positives = 134/321 (41%), Gaps = 23/321 (7%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 K + ++DLNLL+ L L+ RSVT+AA+R+N++ SA+S SL++LR FDDPL V + L Sbjct: 2 KDLRSVDLNLLVDLDALLSMRSVTEAARRLNLSQSAMSGSLSRLRRLFDDPLMVRNGRVL 61 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPR--GLKFELAAESPLMMIMLNALSKQIY 120 TP ++ + E + + + + PR F ++A ++L L + + Sbjct: 62 VLTPRAEALIPPVKEILHQIDGVFAESDDFDPRTTTRSFSISASDYATAVVLAPLLRGLA 121 Query: 121 QRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 P T+ + D + D+ RE S + LFSD Sbjct: 122 DDAPNVTVNVLPRSPDVPAVLRLDSADLVIEPREMMGDSP---------LPGVSLFSDRW 172 Query: 181 CVWLRKD-H-PALHQTWNLDTFLRYPHISICWEQSDT-WALDNVLQELGRERTIAMSLPE 237 L H PA+ D +L+ PH+ Q D L LG R I +++ Sbjct: 173 VCMLDGSMHEPAVLARLERDHYLQLPHLVYSIGQDRQLNYADRHLASLGVRRRIELTVES 232 Query: 238 FEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKR 297 F + + L++ L L LV P+P + + W+ R Sbjct: 233 FLMAPLLIRGTS--LVSLVLERAASMLPLDGLRLVDPPIPVP-------GITDAMYWNPR 283 Query: 298 NSHNPKIVWLRETIKNLYASM 318 +S +P WLR+ + + A + Sbjct: 284 HSEDPGHRWLRQRLADTAARL 304 >UniRef50_C2LG43 LysR-family transcriptional regulator n=4 Tax=Enterobacteriaceae RepID=C2LG43_PROMI Length = 323 Score = 268 bits (685), Expect = 3e-70, Method: Composition-based stats. Identities = 157/316 (49%), Positives = 224/316 (70%) Query: 2 KKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLG 61 K + +DLNLL+ Q+L+QERSVT AAK ++++PSAVSK+LAKLR WFDDPLF+ SP G Sbjct: 3 NKPLHRIDLNLLVIFQILLQERSVTLAAKWLSISPSAVSKALAKLRIWFDDPLFIRSPQG 62 Query: 62 LSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQ 121 L PTPL +S+E +L++++ +S+ + +K + + P GLKF L E+PL +ML +L +QI Sbjct: 63 LIPTPLSLSIEDSLSDFINISHHIANKRNTEVPVGLKFNLVLETPLHQVMLPSLPQQILS 122 Query: 122 RYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPC 181 YP++T++++NW+Y+SL I GEVDIG GRE + RS+ELL LP IDYE+LF D+P Sbjct: 123 HYPKSTLQIKNWEYNSLSNIIDGEVDIGLVGREYYSRSKELLELLPDVIDYEILFDDIPL 182 Query: 182 VWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQS 241 V+L K+HP + W+L+ FL + +S +++ WALDN+L+E+ + R IA++ FEQS Sbjct: 183 VYLHKNHPLMKMKWDLNNFLSFSQVSTEYDKQSHWALDNILKEMNKSRQIAITYTSFEQS 242 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 LFM +QPD+ L+ AP YC+YY + H +V LP+P +L +PF LLWHKRNSHN Sbjct: 243 LFMISQPDHQLITCAPGYCRYYVKTHFPDIVTLPIPLPPVFLDQLHLPFVLLWHKRNSHN 302 Query: 302 PKIVWLRETIKNLYAS 317 KI+WLR TI+ Sbjct: 303 TKIIWLRNTIRKSINQ 318 >UniRef50_D0RY94 Transcriptional regulator n=4 Tax=Acinetobacter RepID=D0RY94_ACICA Length = 311 Score = 268 bits (685), Expect = 3e-70, Method: Composition-based stats. Identities = 75/325 (23%), Positives = 147/325 (45%), Gaps = 24/325 (7%) Query: 1 MKKS---ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVN 57 M + + +DLNL + +E+++T+A++++ ++ AVS +LA+LR F+DPLF+ Sbjct: 4 MNNNVASLARIDLNLFRVFVTIYKEKNLTRASEQLFLSQPAVSHALARLRDHFNDPLFIR 63 Query: 58 SPLGLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNAL 115 G+ P+PL + + + +Q+ + + + P +A I L ++ Sbjct: 64 DGHGVVPSPLAKRLWPKIEQSLQLMHQAIQSTYDFVPARDLKHLTIAMNDEYEGIFLPSI 123 Query: 116 SKQIYQRYPQATIKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEV 174 + + Q P + D +L ++ G++D ++ S+ +I YE Sbjct: 124 IQHLTQFNPNLQLNSVRIDRKNLRHELSTGKIDFAI----------DVQHSVEDSIGYEC 173 Query: 175 LFSDVPCVWLRKDHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAM 233 D V RK HP L T + +L HI++ + D L + G +RTI+ Sbjct: 174 CTKDQFVVISRKQHPLLSSTDLTKEIYLDAKHITVSSRPTGRVFEDFFLSKQGIKRTISF 233 Query: 234 SLPEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLL 293 ++E ++ + Q D+LL T P+ Y + + + PLP D + + L Sbjct: 234 RCQQYETAIRLITQTDHLL--TIPQCQIAYFKDNYPQIKVHPLPIDIAGYQ-----MNLY 286 Query: 294 WHKRNSHNPKIVWLRETIKNLYASM 318 W ++ SH +IVW + + + ++ Sbjct: 287 WDQQKSHEHQIVWCKAQLLQIMNNL 311 >UniRef50_Q5LN55 Transcriptional regulator, LysR family n=4 Tax=Rhodobacterales RepID=Q5LN55_SILPO Length = 331 Score = 267 bits (684), Expect = 3e-70, Method: Composition-based stats. Identities = 78/326 (23%), Positives = 126/326 (38%), Gaps = 28/326 (8%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 + T DLNLL L L+ RS T+A +++ ++ AVS +L++LR DPLF+ L Sbjct: 1 MNFRTFDLNLLRVLDALLSTRSTTRAGQQLGMSQPAVSAALSRLRHALGDPLFIRQGRQL 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTP--RGLKFELAAESPLMMIMLNALSKQIY 120 PT + L + + + LL P L+ +++ L++ + Sbjct: 61 VPTDYAGGLHAPLRDLLGQTEALLAGQPDFDPGAATDSLTLSGSDFYAELLMPRLARHLS 120 Query: 121 QRYPQATIKLRNWDYDS-LDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 P ++L + D+ + ++ + VD+ + P ++ L S Sbjct: 121 HVAPGMRVQLVDLVPDNYVQSVGQSAVDMAILPA----------TPTPDWVEERRLHSSH 170 Query: 180 PCVWLRKDHPALHQT-------WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIA 232 R DHP + LD F H E D L +GR R + Sbjct: 171 FLAVARADHPEIASAAIAPGAVLPLDLFCSLQHALFSPEGKLHGLGDAALARIGRARQVT 230 Query: 233 MSLPEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTL 292 M+LP F L +Q D + L + + L L P+P V + Sbjct: 231 MTLPVFSGVLNAVSQSDLIAL-IPHQLAESVAPRLGLSLYHPPIPV-------GPVEIMM 282 Query: 293 LWHKRNSHNPKIVWLRETIKNLYASM 318 +WHKR S P WLR+ I L A + Sbjct: 283 VWHKRASTAPAHRWLRDQIAMLMAEL 308 >UniRef50_A4JED2 Transcriptional regulator, LysR family n=9 Tax=Proteobacteria RepID=A4JED2_BURVG Length = 308 Score = 267 bits (683), Expect = 4e-70, Method: Composition-based stats. Identities = 71/318 (22%), Positives = 126/318 (39%), Gaps = 20/318 (6%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 LDLNLL+ L L+ E+++++AA++I+++ SA S +LA+LR +FDD L V + Sbjct: 1 MRFNKLDLNLLVALDALLSEQNISRAAEKIHLSQSATSNALARLREYFDDELLVQVGRKM 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQIY 120 PTP +++ + + + + + P F L M ++ L + Y Sbjct: 61 EPTPRAEALKDAVRDILVRVDATVTAQPEFVPAQACRLFRLFVSDYTMTTLIPHLFRLAY 120 Query: 121 QRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 + P LR + RGE D+ +E EVL + Sbjct: 121 AQAPGIGFDLRPQVAYPHRVLERGEADLLIIPKEYC----------STEHPAEVLLEETF 170 Query: 181 CVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQ 240 C L + P + ++ HI + + T +Q LG R + S F Sbjct: 171 CCVLWEHSPLAKGELTKERYMGAGHIVVQVGEGQTALEAWFMQRLGVVRRVEASTYSFLS 230 Query: 241 SLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 + + + R + + L L +PL +Q ++ WHK + Sbjct: 231 PAHLLVGTNRIA-TMHRRLAEAAARDLPLVLRDVPLTVPTMEQ-------SVQWHKHRTS 282 Query: 301 NPKIVWLRETIKNLYASM 318 + ++WLR +K A+M Sbjct: 283 DQGLMWLRALLKEAVAAM 300 >UniRef50_Q687Z9 LysR-type activator n=1 Tax=Sphingopyxis macrogoltabida RepID=Q687Z9_9SPHN Length = 318 Score = 266 bits (682), Expect = 5e-70, Method: Composition-based stats. Identities = 63/307 (20%), Positives = 122/307 (39%), Gaps = 22/307 (7%) Query: 14 LCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSMEQ 73 +M +R V+ AA+ + +T VS +L +LR DD LF +P G+ PT + + + Sbjct: 26 RIFHRMMVDRKVSAAAEALGITQPGVSNALKRLRDITDDELFTRAPGGMEPTAFAIQIAE 85 Query: 74 NLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQIYQRYPQATI-KL 130 ++ + M + +P P F L +L + + + P + + Sbjct: 86 PISYALAMVDAAFTQPTDFKPASDRRLFRLGLTDIGEAYLLPKILARTAEIAPHVSFTTI 145 Query: 131 RNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPA 190 R + + + G +D+ ++ ++ + L + + +RKDHP Sbjct: 146 RPPKSEIREEMEVGSLDLAI----------DVFPNMKGNFVHRRLLKEKHVICMRKDHPL 195 Query: 191 L-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQPD 249 W + ++ H+ + + + +D +L G R I + LP F + + Sbjct: 196 ANKAEWTMADYIAQEHVVVIAQGTGHGDIDALLARKGISRNIRLMLPHFLSLGPVMHATN 255 Query: 250 NLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWLRE 309 L+AT P + L++LP P V + WH+R +P VWLR Sbjct: 256 --LVATLPEDAALLLE-EPYELISLPFP-----GILPIVHVDVFWHRRLHRDPANVWLRN 307 Query: 310 TIKNLYA 316 + L++ Sbjct: 308 LVYELFS 314 >UniRef50_A6FY23 Transcriptional regulator, LysR family protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6FY23_9DELT Length = 339 Score = 266 bits (682), Expect = 6e-70, Method: Composition-based stats. Identities = 67/303 (22%), Positives = 124/303 (40%), Gaps = 21/303 (6%) Query: 21 QERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSMEQNLAEWMQ 80 Q SVT AA+R+ ++ AVS +LA+LR F DPL V + G+ TP + + + + Sbjct: 21 QTSSVTGAARRLGLSTPAVSHALARLRERFGDPLLVRAGRGMVLTPRAEQLRPRVRDALS 80 Query: 81 MSNLLLDKPHHQTPR--GLKFELAAESPLMMIMLNALSKQIYQRYPQATIKLRNWDYDSL 138 ++ L+ + P P F L+ ++ + ++ P +++ D Sbjct: 81 LATLVFEDPGAFEPASMERSFTLSMTDYVLRVFGGPFEARVRAAAPGVDLRVIVNAVDDA 140 Query: 139 DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPAL---HQTW 195 + + G+ D+ + +LP + + S+ +R+ HP L + Sbjct: 141 ERLRAGDTDLVVG----------IYGALPPELRTRAIISERLVCVVREAHPVLAPTKRRL 190 Query: 196 NLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQPDNLLLAT 255 L F+ H+ I +D+ L ELG R +A ++P F+ +L M A D LL Sbjct: 191 TLRQFVTLEHVQIAPRGQPGGYVDDRLAELGHARRVARAVPFFQLALEMTASSDYLL-TV 249 Query: 256 APRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWLRETIKNLY 315 + R + L ++ P +++WH R + WLRE + Sbjct: 250 SERIARQLGPELGLRVLEPPSEL-----GLEPYALSMVWHPRFDADAGHRWLREQLVEST 304 Query: 316 ASM 318 ++ Sbjct: 305 QAL 307 >UniRef50_Q1R0T8 Transcriptional regulator, LysR family n=9 Tax=Gammaproteobacteria RepID=Q1R0T8_CHRSD Length = 308 Score = 266 bits (682), Expect = 6e-70, Method: Composition-based stats. Identities = 66/316 (20%), Positives = 123/316 (38%), Gaps = 22/316 (6%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 + +DLNL+ L + SVT AA ++NVT +VS SL++LR FDDPLF + G++P Sbjct: 1 MRPIDLNLVRTFVTLYESGSVTLAAHKLNVTQPSVSYSLSRLRELFDDPLFSRTRDGMAP 60 Query: 65 TPLMVSMEQNLAEWMQMSNLLLDKPHHQTP--RGLKFELAAESPLMMIMLNALSKQIYQR 122 T + + + + + L H P +F LA +L + + + Sbjct: 61 TFCAMRLYTSFRQALTQIEQTLSDAQHFDPEQSQRRFRLALTDLGETTLLAPILRHMRDL 120 Query: 123 YPQATIKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPC 181 P +++ + D + VD R+ ++ + + Sbjct: 121 APGVELEVVPLEIDKVVSWFDNKSVDAVICSRDIQA----------PSLGRRPIIEERYV 170 Query: 182 VWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQS 241 L + HP + QT +++ F R H+ + + +++VL+E R +++ +P F Sbjct: 171 GLLGRRHPRIGQTLSMEAFSREDHVQVSPT-TGHGLVEDVLKERDITRKVSVVVPHFSAL 229 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 + L + + + Q L V LP V L W ++ + Sbjct: 230 PRLLESTSLLAI-LPEQIAGLFTQQADLKQVELPFDIP-------PVEVALYWSRQVDDS 281 Query: 302 PKIVWLRETIKNLYAS 317 W R T+ + Sbjct: 282 AAQEWFRRTLIEATSR 297 >UniRef50_B0C4T0 Transcriptional regulator, LysR family n=1 Tax=Acaryochloris marina MBIC11017 RepID=B0C4T0_ACAM1 Length = 307 Score = 266 bits (681), Expect = 7e-70, Method: Composition-based stats. Identities = 64/309 (20%), Positives = 130/309 (42%), Gaps = 24/309 (7%) Query: 15 CLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSP-LGLSPTPLMVSMEQ 73 +L+QE SVT+AA+++N++ SA+S +L +LRA DP+ + + + TP + + Sbjct: 18 AFDILVQEASVTQAAEKLNMSQSAMSHALKRLRAVLKDPILIRTSQRQMEVTPYALEISP 77 Query: 74 NLAEWMQMSNLLLDKPHHQTPRGLK--FELAAESPLMMIMLNALSKQIYQRYPQATIKLR 131 + + + L P + F +A + + L +Q+ Q+ P I+++ Sbjct: 78 QVRQILAEIQETLLAKDVFNPATAQEDFRIATNDYVEATLSANLLQQLTQQAPGIQIRVK 137 Query: 132 NWDYDS-LDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPA 190 + D+ L A+ +D+ R E L+ + L+ D P Sbjct: 138 GLNKDAVLAALDDNSIDLFIGAGLDLKR----------WHVQESLYQEEFVCVLQSDCPL 187 Query: 191 LHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQPDN 250 +L+ ++ HI + ++ D +L++ + R + S P F F+ A D Sbjct: 188 --TELSLEQYVERTHILVSFQDDFRGIGDLILEQQQQSRQVVWSTPHFMVVPFLLANSDC 245 Query: 251 LLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWLRET 310 + L R + + L L+ P+ +++WH+R+++ P+ WLR+ Sbjct: 246 VAL-LPKRMAERCAKEMGLKLLPPPI-------DVTRFTVSMIWHQRHNNRPQHQWLRKQ 297 Query: 311 IKNLYASMA 319 +A Sbjct: 298 FLIAAKQLA 306 >UniRef50_A1UYR8 Transcriptional regulator, LysR family n=32 Tax=Burkholderia RepID=A1UYR8_BURMS Length = 313 Score = 266 bits (681), Expect = 7e-70, Method: Composition-based stats. Identities = 75/319 (23%), Positives = 138/319 (43%), Gaps = 22/319 (6%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 ++ ++DLNLL+ L L+ ER VT+A +RI +T AVS +L +LR F D + + +PLG+ Sbjct: 1 MNLRSIDLNLLVILDALLAERQVTRAGQRIGLTQPAVSNALGRLRYVFKDEILMRTPLGM 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQT--PRGLKFELAAESPLMMIMLNALSKQIY 120 TP ++ + + +Q L + +F L +++ L + I Sbjct: 61 ELTPRAKALACPIRQILQQIEELFVPENQFDSFTSDRRFTLRMSDLTELLLPPPLLRNIR 120 Query: 121 QRYPQATIKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 P + + + + D +++A+ G +D+ H P AI +VLF D Sbjct: 121 GTAPHIRMNVMHLNADKTVEALDSGRLDMAVCAGLDH----------PDAISSQVLFQDR 170 Query: 180 PCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFE 239 L + HP ++ L+ F +++ D+ +D +L ++ R IA ++P + Sbjct: 171 LVCVLSRRHPDANRPLTLERFAALDFLNVSINPVDSSLIDTMLADMRFTRRIAFNVPHWL 230 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 M L +L + LPL + V +TL WH+R Sbjct: 231 VVPSMLDA--LPLAVIMSERHALSLGDSRLAIRELPLDLE-------PVTWTLYWHRRYD 281 Query: 300 HNPKIVWLRETIKNLYASM 318 ++ WLR I ++ ++ Sbjct: 282 NSVAHEWLRNCITDVVDAI 300 >UniRef50_Q2KYC5 LysR-family transcriptional regulator n=9 Tax=Burkholderiales RepID=Q2KYC5_BORA1 Length = 306 Score = 266 bits (681), Expect = 7e-70, Method: Composition-based stats. Identities = 72/319 (22%), Positives = 123/319 (38%), Gaps = 22/319 (6%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 ++ LDLNLL+ Q L++ER+++ A+R++++ AVS +L +LR F D LFV + G+ Sbjct: 8 DALRKLDLNLLVVFQHLLEERNISAVARRLDLSQPAVSNALRRLRLAFGDELFVRTAQGM 67 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQIY 120 PTPL M ++E + + + L D P + +A + + L + Sbjct: 68 LPTPLAEGMGGQVSEALSLLSHLADAAQPFDPATSQRRLRIAMSDAGEIHFMPTLMELCA 127 Query: 121 QRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 + P I D + G VD+ L I +LF Sbjct: 128 RHVPGVRIDSLRCT-DLQRELDTGRVDLALGA----------FDGLGSGIVQRMLFRQGY 176 Query: 181 CVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQ 240 R HP + + F H+ + + ++ L+ G S+P F Sbjct: 177 ATLFRAGHPRAYAGMSARAFRAEQHLVVS-RAAPDGQINQALERAGVVLQEQFSVPHFAA 235 Query: 241 SLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 ++ + D LL + L ++ LP+ Q L WH+R Sbjct: 236 VPYIVSTTD-LLATVPEKLAASAAPRFGLQVLTLPIKVPLLQTN-------LYWHRRFQR 287 Query: 301 NPKIVWLRETIKNLYASMA 319 + WLR I + +A A Sbjct: 288 DGANQWLRGLIIDTFADRA 306 >UniRef50_C5CZA2 Transcriptional regulator, LysR family n=1 Tax=Variovorax paradoxus S110 RepID=C5CZA2_VARPS Length = 317 Score = 266 bits (681), Expect = 7e-70, Method: Composition-based stats. Identities = 72/321 (22%), Positives = 120/321 (37%), Gaps = 23/321 (7%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 +I ++DLNL L Q + RSVT A R+ +T SAVS +L ++R F+D LFV S G+ Sbjct: 1 MNINSIDLNLFLVFQAIYATRSVTLAGDRLGMTQSAVSNALKRMRERFNDALFVRSADGM 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTP--RGLKFELAAESPLMMIMLNALSKQIY 120 PTP+ + + E + +D+ P F +A ++M+ L Sbjct: 61 VPTPVAERLIAPIEEGIACLVQAVDQGRTFEPETSSRIFRIAVNDIGQLVMVPELISVAR 120 Query: 121 QRYPQATIKLRNWD-YDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 P + + ++ + G++D+ E ++ + + LF + Sbjct: 121 GIAPGVRFETVDVSVAEARQRMLHGQIDVALGSWE----------AMGPSFYQQRLFDET 170 Query: 180 PCVWLRKDHPA-LHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGR--ERTIAMSLP 236 V + K P + LD +L HI+ + + L L+ G R + ++ Sbjct: 171 FVVLMSKASPLGTRERIELDDYLAAEHIAYRPQGTTDSQLQQTLERAGALDRRRVVLTAA 230 Query: 237 EFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHK 296 + A LL A A L V P WH+ Sbjct: 231 HSLGLTSIVATSGLLLTAPARLAKAMVASRADLHSVDAPFEV-------RPFEIRQQWHE 283 Query: 297 RNSHNPKIVWLRETIKNLYAS 317 R + WLRE I L+ Sbjct: 284 RFHQDSGNRWLRELIFGLFHE 304 >UniRef50_Q7NT25 Probable transcription regulator protein n=1 Tax=Chromobacterium violaceum RepID=Q7NT25_CHRVO Length = 310 Score = 266 bits (680), Expect = 1e-69, Method: Composition-based stats. Identities = 70/310 (22%), Positives = 121/310 (39%), Gaps = 20/310 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 L+LNLL L+ L++ R++T++A R+ +T SA+S+ L +LRA F DPL + T Sbjct: 5 LNLNLLRSLEALLETRNLTRSAARLGLTQSAMSRHLVQLRAQFQDPLLLREGQRFVLTER 64 Query: 68 MVSMEQNLAEWMQMSNLLLDKP-HHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + L ++ L P + +F A L ML + ++ + P Sbjct: 65 AEELRLGLKAVLEQVEQLYQPPQFDPSACEREFSFAGSDYLAEYMLPDILDRVLPQAPGM 124 Query: 127 TIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRK 186 +K W D ++ G D+ + +P I + L D P + Sbjct: 125 RLKFIPWQAGRFDLLSDGAADLI----------STIADEVPDNIYGKSLGQDQPMCVMAD 174 Query: 187 DHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMA 245 +HP + D +L +PH + +D L G R I ++ P F +L + Sbjct: 175 NHPLHDKPALERDDYLAWPHARVSSASDKDGFVDIQLARNGLSRQIRIATPYFVSALSIV 234 Query: 246 AQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIV 305 ++ LLL + + + LP + LLWH R +P Sbjct: 235 SRS-QLLLTLPEHLAVRFQRQFPVRAKPLPF-------IDYTYRYWLLWHGRADKDPAHR 286 Query: 306 WLRETIKNLY 315 W R + ++ Sbjct: 287 WFRGHVFDVL 296 >UniRef50_A1WMY5 Transcriptional regulator, LysR family n=1 Tax=Verminephrobacter eiseniae EF01-2 RepID=A1WMY5_VEREI Length = 304 Score = 266 bits (680), Expect = 1e-69, Method: Composition-based stats. Identities = 77/317 (24%), Positives = 143/317 (45%), Gaps = 23/317 (7%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 + +DLNLL+ Q L++ER+V++AA+R+ ++ SAVS +L +LR F D L V P G+ Sbjct: 1 MGLRQIDLNLLVTFQALVEERNVSRAAERLALSQSAVSHALKRLRNTFQDELLVRGPRGM 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQIY 120 PTP V++ + + +D+ P + L+ + ++ + + Sbjct: 61 EPTPRAVTLAIAVKSGLATIETAVDEKRSFDPATCHSTYYLSVTEYVRPFIMAHMCAYVR 120 Query: 121 QRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 + P + + D + + + R +L + P ++ LF D Sbjct: 121 EAAPHVRLVFESPDEHQVGS--------AVAYEGLQIRLADLPVNGP--MESMRLFDDTF 170 Query: 181 CVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQ 240 V +R++HP Q L+ +L+ HI + + A+D L R + + +P + + Sbjct: 171 AVAMRREHPFAEQELTLEKYLQLAHIKVT--GVGSSAIDRALTARSLVRDVVVKMPNWLE 228 Query: 241 SLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 +L + D L+ P + +L + + PLP ++P WH RNS Sbjct: 229 ALEVVECTD--LVVAMPNHWTRLGRLPRC-CITRPLPLAL------QMPIDAAWHPRNSS 279 Query: 301 NPKIVWLRETIKNLYAS 317 +P VWLRET++ +A+ Sbjct: 280 DPAHVWLRETVRQAFAA 296 >UniRef50_Q0SCY7 Transcriptional regulator, LysR family protein n=3 Tax=Actinomycetales RepID=Q0SCY7_RHOSR Length = 331 Score = 266 bits (680), Expect = 1e-69, Method: Composition-based stats. Identities = 76/318 (23%), Positives = 131/318 (41%), Gaps = 22/318 (6%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 + +DLNL+ LL + RSVT+ A+ + +T +VS SL +LR F+D LF+ S GL+P Sbjct: 28 MADVDLNLIRTFVLLYETRSVTRTAELLFITQPSVSHSLRRLRRQFNDDLFIRSSDGLAP 87 Query: 65 TPLMVSMEQNLAEWMQMSNLLLDKPHHQT--PRGLKFELAAESPLMMIMLNALSKQIYQR 122 T L SM L + +++ + + H F + A + +L + + R Sbjct: 88 TVLAASMYPQLHQALEVIDETVSGVGHFDAETSDRTFRICATDLGEISLLPGVLAALETR 147 Query: 123 YPQATIKLRNWD-YDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPC 181 P +++ D + + + +G D + + LF + Sbjct: 148 APGCAVQVTPLDFASAAEELRQGRADAVICTPRIDA----------PDLRRDPLFREGYV 197 Query: 182 VWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQS 241 HP + LD FL HI + + D L +GR R IA+ +P F Sbjct: 198 GLCALGHPRIGVEPGLDDFLAERHIVVDA-AAGHVDADQALARMGRRRDIAVRVPHFAVL 256 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 + AQ +L + R + + + + ALP+ V +L +R + Sbjct: 257 PELVAQTRHLAVV-PSRVAELFTRSSPVRTFALPVEIP-------NVEVSLFTVRRALPS 308 Query: 302 PKIVWLRETIKNLYASMA 319 P + WLRE I ++ + A Sbjct: 309 PGVDWLRELIADVLQAPA 326 >UniRef50_C5CZY6 Transcriptional regulator, LysR family n=1 Tax=Variovorax paradoxus S110 RepID=C5CZY6_VARPS Length = 325 Score = 265 bits (679), Expect = 1e-69, Method: Composition-based stats. Identities = 76/325 (23%), Positives = 135/325 (41%), Gaps = 24/325 (7%) Query: 1 MKKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPL 60 M +S +D++LL L L+ ERSV++AA R+N T A+S +L +LR F DP+ V Sbjct: 1 MTRSQDLVDIHLLRVLAALVAERSVSRAAVRMNQTQPAISAALRRLRDAFGDPILVRERG 60 Query: 61 GLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTP--RGLKFELAAESPLMMIMLNALSKQ 118 G+ PT + + ++ E + + +L P P + F +A L + + + Sbjct: 61 GMVPTARALQLRESAREVLGEIDRMLAGPERFEPGASTMTFTIATPDYLAASFMAEVVAR 120 Query: 119 IYQRYPQATIKLRNWDY--DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLF 176 PQA + + D A+ +GE+DI P + +L Sbjct: 121 FRAEAPQARLLIHPLTPGYDYERALAQGELDIVIGNWPLP----------PERMHLSLLI 170 Query: 177 SDVPCVWLRKDHPALH-QTWNLDTFLRYPHISICW-EQSDTWALDNVLQELGRERTIAMS 234 D + +P L +L H+ +S +D+ L L + R + Sbjct: 171 EDELVCMMSPGNPLAAPGAMTLQRYLAAAHVVPTPFAKSHRAVVDSHLAGLRQTRDARVF 230 Query: 235 LPEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLW 294 +P + + ++ A+ D L+ TA + + + + + VA P F + F LW Sbjct: 231 VPYYAMAPYLVAESD-LVFTTARHFAEQFTRSLPVVSVAAPEGFPRMR-------FYQLW 282 Query: 295 HKRNSHNPKIVWLRETIKNLYASMA 319 H+R+ H WLR + + +A Sbjct: 283 HERSQHQGAHRWLRSLLSTVGGHLA 307 >UniRef50_A0KH33 Transcriptional regulator, LysR family n=2 Tax=Aeromonas RepID=A0KH33_AERHH Length = 313 Score = 265 bits (679), Expect = 1e-69, Method: Composition-based stats. Identities = 70/307 (22%), Positives = 130/307 (42%), Gaps = 19/307 (6%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 + +LNLL L++L++ R++++AA+ ++++ ++SK L +LR+ F D L V Sbjct: 1 MHKANLNLLPTLKVLLETRNISRAAELLHLSQPSISKQLGQLRSEFGDELLVREGQRWLL 60 Query: 65 TPLMVSMEQNLAEWMQMSNLLLDKP-HHQTPRGLKFELAAESPLMMIMLNALSKQIYQRY 123 TP ++ LA+ + L + P + F LA+ + +L + + + Sbjct: 61 TPRAEALAAQLADSLGALERLYEAPGFDPSRCERVFRLASSDYVAQHILPDICAALAREA 120 Query: 124 PQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVW 183 P A ++ WD L + + E+D+ + +P I D V Sbjct: 121 PLAALEYSLWDKRLLPQLWQSELDMV----------STITELVPDQIRGLHQGEDRLVVL 170 Query: 184 LRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 + HP ++ +LD +L +PH+ + ++ VL G R +P F+ ++ Sbjct: 171 MGSHHPLAGRSLSLDDYLAWPHLQVSGGGDKDSPVEQVLAPQGLSRRWFARVPFFQAAVE 230 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 + + D LL T + H L LP Q + LLWH+R+ +P Sbjct: 231 VLLRTDCLL-TTPAHIAWQLSCEHALHFCDLPFASRTQQ-------YHLLWHQRHHQDPA 282 Query: 304 IVWLRET 310 W RE Sbjct: 283 HKWFREL 289 >UniRef50_D1P5Q9 Transcriptional regulator, LysR family n=1 Tax=Providencia rustigianii DSM 4541 RepID=D1P5Q9_9ENTR Length = 305 Score = 265 bits (679), Expect = 1e-69, Method: Composition-based stats. Identities = 69/319 (21%), Positives = 141/319 (44%), Gaps = 22/319 (6%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 ++ LDLN L+ L +L++ER V++AA+ + + AVS +L +LR F DPL V Sbjct: 2 NNLRKLDLNQLVTLSVLLRERHVSRAAEALYKSQPAVSHALNQLRELFQDPLLVRRDGQY 61 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDK-PHHQTPRGLKFELAAESPLMMIMLNALSKQIYQ 121 T S+ L E + + L+ + + F +A ++ L + + Sbjct: 62 QLTSKAESLCIPLNEALNQLDDLIAQKQFNPLSCQRHFNIAMSDYGAALIAVKLVPYLRK 121 Query: 122 RYPQATIKLRNWDYDSLD-AITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 P +K+ + + + + G +D+ F + ++L ++ +++F+D Sbjct: 122 YAPDIDLKIWHCSREEMQNKLHEGSLDLAFG----------VFNTLDYSLRNQIVFTDKF 171 Query: 181 CVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQ 240 + +L ++ YPHI + + D +D+ LQ + ++R IA+++P ++ Sbjct: 172 VSIVDPQ-VCSQGKMDLIDWVSYPHILVSMKPFDANEIDHQLQLINQQRRIAVTVPYWQI 230 Query: 241 SLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 + + + L+ T + + + L PLP ++ F ++WH+R+ Sbjct: 231 APQLLMGTN--LILTLAQKAIPLSMSDKFTLFTPPLPLP-------DLVFQMIWHQRSDT 281 Query: 301 NPKIVWLRETIKNLYASMA 319 + + WLRETI L Sbjct: 282 DKAVYWLRETIVELLNEEG 300 >UniRef50_A5VEA0 Transcriptional regulator, LysR family n=1 Tax=Sphingomonas wittichii RW1 RepID=A5VEA0_SPHWW Length = 309 Score = 265 bits (678), Expect = 2e-69, Method: Composition-based stats. Identities = 63/318 (19%), Positives = 125/318 (39%), Gaps = 13/318 (4%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 + LDLNLL+ L L E++VT+AA+RIN++ +S +L KLR F DPL + Sbjct: 1 MHLRGLDLNLLIALDALFTEKNVTRAAERINISQPGMSAALQKLRWHFSDPLLERVGRRM 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQIY 120 T ++ + E + L DKP P F + A + I+ L +I Sbjct: 61 ELTVRGRALADPVREILIKVRDLTDKPEEFDPATARRVFRIGATTFCSDILAAPLLCRIE 120 Query: 121 QRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 + P +++ + D++ + G++D + L S ++D F+D Sbjct: 121 RIAPNISVQFEDLATDTVHRLVDGQLDFAITISARILSDEVNLDSSLSSLDL---FTDAF 177 Query: 181 CVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQ 240 + + + + D P+I + + + ++ ++ I LP F+ Sbjct: 178 VLVTSRQNSRVGDAVTFDQLCELPYIETRFGNVIAGISEQMWRQQPKQPQIRAWLPNFQL 237 Query: 241 SLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 +L + D + + Q + + + + +P+ + L WH+RN Sbjct: 238 TLDTVSHTDMVAIVPL-HLAQLHGDRYNVRTLPVPVEMPT-------IEERLFWHQRNDQ 289 Query: 301 NPKIVWLRETIKNLYASM 318 + W + ++ Sbjct: 290 DAGHSWFKGLLQETVQGF 307 >UniRef50_A6X639 Transcriptional regulator, LysR family n=1 Tax=Ochrobactrum anthropi ATCC 49188 RepID=A6X639_OCHA4 Length = 324 Score = 264 bits (677), Expect = 2e-69, Method: Composition-based stats. Identities = 80/335 (23%), Positives = 133/335 (39%), Gaps = 41/335 (12%) Query: 4 SITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLS 63 SI +DLNL+ LM+ER+VTKA +R+N+T SAVS +L KLR D LFV P G+ Sbjct: 3 SIHNIDLNLIRVFNALMEERNVTKAGERLNLTQSAVSHALGKLRYILSDELFVRGPQGMH 62 Query: 64 PTPLMVSMEQNLAEWMQMSNLLLDK-PHHQTPRGLKFELAAESPLMMIMLNALSKQIYQR 122 PTP + Q L + + L + F +A + + A+ +++ + Sbjct: 63 PTPRAEELSQPLRSALADISAALSPVQFDPATADMSFVVATSDFYIGTLFPAVMERLEKE 122 Query: 123 YPQATIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPC 181 P + LR ++ + ++ + RG + + +P E L S Sbjct: 123 APGIRLWLRLFNDLNLVEELDRGTLHLVVGA----------FGRIPSRFRRETLVSVDNV 172 Query: 182 VWLRKDHPALHQTWNLDTFLRYPHISICWEQS---------------------DTWALDN 220 +RKDHPA ++T YPHI + + L+ Sbjct: 173 WIMRKDHPASSGPLTIETLGHYPHIDVLLSGRAAMEAAGMQEQEGLERAFVTSNPPFLEG 232 Query: 221 VLQELGRERTIAMSLPEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDE 280 +L+E+G R I ++ + A + + L + Y + L L P P Sbjct: 233 LLREVGLSRRIGATVSLILAVPPLVAATNMIAL-LPRSVAETYKDTYGLVLHEAPYPLPA 291 Query: 281 SQQKKLEVPFTLLWHKRNSHNPKIVWLRETIKNLY 315 +Q +L H +P + WLR ++ Sbjct: 292 TQ-------INMLSHNTFGAHPAVAWLRSVLREAI 319 >UniRef50_B7RV99 Transcriptional regulator, LysR family protein n=1 Tax=marine gamma proteobacterium HTCC2148 RepID=B7RV99_9GAMM Length = 303 Score = 264 bits (677), Expect = 2e-69, Method: Composition-based stats. Identities = 72/318 (22%), Positives = 133/318 (41%), Gaps = 25/318 (7%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 + +DLNL + L +ERSVT+ A+ +++T AVS +L++LR FDD LFV SP G+ Sbjct: 1 MRLDKVDLNLFVVFDALYRERSVTRVAQALHLTQPAVSNALSRLRQSFDDQLFVRSPRGM 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTP--RGLKFELAAESPLMMIMLNALSKQIY 120 PTP+ ++ ++ + + + P + F L ++L L + Sbjct: 61 QPTPVAEAISVDVQKALGLLQKTTLSGQRFDPGSAEMTFRLGMSDVAQNMVLPGLHNALA 120 Query: 121 QRYPQATIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 Q P TI+ D ++ + G++D+ + + R L L S + Sbjct: 121 QLAPGVTIEAYYLDRASAVAQLKSGDLDLLLDAPQVNARELGQL----------HLGSLL 170 Query: 180 PCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFE 239 V + K HP ++D +L H+ + +D L +G R + + + ++ Sbjct: 171 YRVAMAKAHPLAQVDLDIDQYLAAKHVHVSARPRGRGQVDLALHAIGHRRKVVVRVQQYA 230 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 + + AQ D L A +L +V P + + L WH+ + Sbjct: 231 VAAAITAQSDLLWTAPGSVI-----DHPELHVVETPFQVE-------SLVLNLYWHRSAA 278 Query: 300 HNPKIVWLRETIKNLYAS 317 +P W+R+ + +A Sbjct: 279 EDPANAWMRKMLAQQFAE 296 >UniRef50_Q0K3U9 Transcriptional regulator, LysR-family n=2 Tax=Betaproteobacteria RepID=Q0K3U9_RALEH Length = 311 Score = 264 bits (676), Expect = 3e-69, Method: Composition-based stats. Identities = 64/319 (20%), Positives = 118/319 (36%), Gaps = 25/319 (7%) Query: 4 SITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLS 63 +DLNL++ L +L++ERSV++AA R+++ AVS +LA+LR FDDPL V + G+ Sbjct: 7 HFRGVDLNLMVTLTVLLRERSVSRAAARLHLGQPAVSGALARLREMFDDPLLVRTAHGME 66 Query: 64 PTPLMVSMEQNLAEWMQMSNLLLDKPHHQTP--RGLKFELAAESPLMMIMLNALSKQIYQ 121 PT + +E+ L + L + P F + + + + + + Sbjct: 67 PTERALELERRLLPALGEIEAALLQRRDFDPLTSDRTFVVGMPDWVELWLAPRILPSLST 126 Query: 122 RYPQATIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 P + + D + + R E+D+G R + Sbjct: 127 CAPGVRLAIVPTDPFRGTEMLERNEMDLGIGPFAKGAAWR----------RERAWQTMGF 176 Query: 181 CVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQ 240 Q +L +LR+PH+ + + + D L G+ R + S F Sbjct: 177 RCVYGAAPLDACQILSLQDYLRFPHVLVSYRGAFDSTADTWLATQGQARDVRYSSARFAS 236 Query: 241 SLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 + L + L + P+P + T +W + Sbjct: 237 VPAILKGT-AALATVPAVLADQWCATEGLRQLPCPVPMP-------DFTVTAVWSAARDN 288 Query: 301 NPKIVWLRETIKNLYASMA 319 + ++WL N +A +A Sbjct: 289 DAGLMWL----ANTFAGLA 303 >UniRef50_Q8XRG7 Probable transcriptional regulator transcription regulator protein n=1 Tax=Ralstonia solanacearum RepID=Q8XRG7_RALSO Length = 308 Score = 264 bits (675), Expect = 4e-69, Method: Composition-based stats. Identities = 68/315 (21%), Positives = 123/315 (39%), Gaps = 23/315 (7%) Query: 7 TLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTP 66 LDLNLL + + + R++T +R+ ++ AVS+ LA+LR + D LFV G+ PT Sbjct: 13 HLDLNLLELFESIWRTRNLTATGERLGLSQPAVSRGLARLRETYGDELFVRHRRGVEPTA 72 Query: 67 LMVSMEQNLAEWMQMSNLLLD-KPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQ 125 ++ + ++ + + ++ +F +A L L+ + PQ Sbjct: 73 FAQTLAEPVSAALAIVRRTIEKPTFSAAEDARRFRVALSDIGERYFLPRLAAWLADHAPQ 132 Query: 126 ATIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 +I + + L + GE+D+ L L + + LF + Sbjct: 133 VSIDTVSASREELLTGLASGEIDLAVGF----------LPGLGKQVHEKRLFQEKFVYIA 182 Query: 185 RKDHPALHQTWNLDTFLRYPHISICWEQSDT-WALDNVLQELGRERTIAMSLPEFEQSLF 243 R+DHP + PH+ + A++ VL +AM + F Sbjct: 183 RRDHPGIDGRLQASQLRALPHVVGSPHGTQHAAAVEKVLTGPRVRAVVAMRVGSFLSIGP 242 Query: 244 MAAQPDNLLLATAPR-YCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 + A D L+A P ++ L L+A P+ F +++WH+R +P Sbjct: 243 IVADSD--LVAVVPSNLAALVSEHVGLQLIAPPVRFP-------SFEVSMVWHRRFHGDP 293 Query: 303 KIVWLRETIKNLYAS 317 WLR L+ Sbjct: 294 GGAWLRGVFSQLFGE 308 >UniRef50_A0KIB7 Transcriptional regulator, LysR family n=2 Tax=Aeromonas RepID=A0KIB7_AERHH Length = 303 Score = 263 bits (674), Expect = 4e-69, Method: Composition-based stats. Identities = 69/307 (22%), Positives = 131/307 (42%), Gaps = 20/307 (6%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 ++ +DLNLL+ L+ L++ER+ TKAA+R+ ++ AVS++LA+LR +DDPL + +P G+ Sbjct: 1 MNLRGVDLNLLVVLKALLEERNTTKAAERLAMSQPAVSRALARLRLLYDDPLLIRTPQGM 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQIY 120 PT ++ L E + P P + A + + +M+ +L ++ Sbjct: 61 EPTARAEALLLPLREILHDIEQTFSPPEQLDPAQFEGVLRIGAHTYVEYVMMPSLLARLQ 120 Query: 121 QRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 Q+ P I + + D + G + + S ++ +P LF D Sbjct: 121 QQAPNLRIHMVPLNADYESQLDEGVISMVISKQD----------EVPGRFRRIPLFEDKL 170 Query: 181 CVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQ 240 + HP Q +++F + H+ + S+ +D++L G R + + F Sbjct: 171 ICAAHRSHPLQGQVLCIESFAQAQHLLVAPRGSEGGIVDDLLAAHGMTRHTPLIVQSFLA 230 Query: 241 SLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 + F+ LLL + R + L L +L+ H+R+ + Sbjct: 231 APFILPCA-PLLLTSPARVLRPLMPLLDLVEYETRFALPT-------FEVSLIRHRRDDN 282 Query: 301 NPKIVWL 307 N + W Sbjct: 283 NAMLNWF 289 >UniRef50_A2SDX3 Transcriptional regulator, LysR family n=6 Tax=Burkholderiales RepID=A2SDX3_METPP Length = 326 Score = 263 bits (674), Expect = 5e-69, Method: Composition-based stats. Identities = 83/325 (25%), Positives = 133/325 (40%), Gaps = 29/325 (8%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 ++L+L+ L ++ ERSV++AA R+ T AVS L +LRA DPL V S G++P Sbjct: 7 FDKIELHLVRVLHTVITERSVSRAALRLRTTQPAVSAQLKRLRALVGDPLLVRSGTGMAP 66 Query: 65 TPLMVSMEQNLAEWMQMSNLLLDK-----PHHQTPRGLKFELAAESPLMMIMLNALSKQI 119 T + + + + AE ++ + L F +AA L L AL ++ Sbjct: 67 TAVALQLLEPAAELLRNAERLFGSRAEALAFDPAHSETTFRVAASDYLDPQFLPALVTRL 126 Query: 120 YQRYPQATIKLRNWDY--DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFS 177 P +++ D + RGEVD+ P + L S Sbjct: 127 RAEAPGIRVEVLPLSAEFDYRKGLARGEVDLVIGNWLRP----------PAELHLGRLLS 176 Query: 178 DVPCVWLRKDHPALHQT--WNLDTFLRYPHISICW-EQSDTWALDNVLQELGRERTIAMS 234 D + +DHPA+ W + +L HI+ +D L LG R I + Sbjct: 177 DEIVCLVAEDHPAVKSPRSWTAERYLASEHIAPTPLHPGARGVIDEHLDALGLARDIVVR 236 Query: 235 LPEFEQSLFMAAQPDNLLLATAPRYCQYY-NQLHQLPLVALPLPFDESQQKKLEVPFTLL 293 P F M A L+L T +C Y QL L +V P+PF + + L Sbjct: 237 SPYFGLGPQMVAHS-RLVLTTGRLFCSRYVGQLPGLRIVRCPVPFPA-------LVYYQL 288 Query: 294 WHKRNSHNPKIVWLRETIKNLYASM 318 WH+ + + WLR ++++ + Sbjct: 289 WHELSHQSAAGRWLRGVMRDVARGL 313 >UniRef50_Q7MFJ9 Transcriptional regulator n=28 Tax=Vibrio RepID=Q7MFJ9_VIBVY Length = 314 Score = 263 bits (673), Expect = 6e-69, Method: Composition-based stats. Identities = 66/316 (20%), Positives = 130/316 (41%), Gaps = 20/316 (6%) Query: 4 SITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLS 63 ++ ++DLNLL L+ L+ + +++AA+ +N++ AVS++L +LR F DPL V Sbjct: 7 NLRSIDLNLLTILEKLLIHKHISQAAQALNMSQPAVSRALMRLREQFGDPLLVKVNREYR 66 Query: 64 PTPLMVSMEQNLAEWMQMSNL-LLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQR 122 T + + L + L+D F + A MM+++ L + QR Sbjct: 67 LTAKGEYLRRELESSLNTIRQMLVDDAFDPLQYAGVFTIGALDFEMMMIVPKLLARFQQR 126 Query: 123 YPQATIKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPC 181 P+ +++ ++ L D+ + P + + LF+D Sbjct: 127 APKLKLQIVPYNAYMPLHDYLEKVADLLLYSTD----------DSPTNVFKQRLFNDNYA 176 Query: 182 VWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQS 241 V + ++H +Q L+ + R H+ + +D+ L+ ++R + SLP F Sbjct: 177 VVMCQNHVLANQPMTLERYCRSRHVIVSGNGLGKTDIDHELKRRNQQREVVASLPHFSMV 236 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 + D L+ R + + +++ + LP + WH + N Sbjct: 237 PELLINTD-LIATLPRRLVSHLSHRYEITVAELPF-------YTADFQVEQFWHLIHHSN 288 Query: 302 PKIVWLRETIKNLYAS 317 P W+R+ IKN+ Sbjct: 289 PAHQWVRQEIKNMVDE 304 >UniRef50_C6BS61 Transcriptional regulator, LysR family n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6BS61_DESAD Length = 310 Score = 263 bits (673), Expect = 6e-69, Method: Composition-based stats. Identities = 81/320 (25%), Positives = 138/320 (43%), Gaps = 21/320 (6%) Query: 2 KKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLG 61 K + + LDLNLL+ L + ERS+T A ++ +T SAVS +L+KLR FDD LFV Sbjct: 3 KTNSSNLDLNLLVILDTIFTERSLTLAGNKLFMTQSAVSHALSKLRHHFDDRLFVRRGNI 62 Query: 62 LSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQI 119 + PTPL ++ QN+A ++ N L P F L L ++L + + I Sbjct: 63 MEPTPLCKTIHQNIAPSLKAINQSLADRGEFDPASSKRTFSLGLSDYLCKLLLPEILRLI 122 Query: 120 YQRYPQATIKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSD 178 R +I++ Y+ + + G++D+ + + E LF D Sbjct: 123 DSRALGISIRIMQTTYEKREEMLQSGKLDVFLG----------CPRNYGAGVLKEKLFED 172 Query: 179 VPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEF 238 +R DHP + N + ++ +S L++ L G +R I + L + Sbjct: 173 REVCVVRNDHPIKGEVMNEEEMAENEFAALSLSESGLGFLEDYLYRKGVQRKIKIVLQQE 232 Query: 239 EQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRN 298 + + + + A R + Y +L +V +PL E + WH N Sbjct: 233 TVIPSLVENSNLVG-SIAQRLAEMYAAKGRLRIVHMPLE-------NTEFEVSQHWHSLN 284 Query: 299 SHNPKIVWLRETIKNLYASM 318 ++P W+R IK + A++ Sbjct: 285 DNDPAQQWIRSVIKEVAATL 304 >UniRef50_Q1M9F6 Putative LysR-family transcriptional regulator n=1 Tax=Rhizobium leguminosarum bv. viciae 3841 RepID=Q1M9F6_RHIL3 Length = 317 Score = 263 bits (673), Expect = 6e-69, Method: Composition-based stats. Identities = 73/319 (22%), Positives = 134/319 (42%), Gaps = 21/319 (6%) Query: 2 KKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLG 61 + S+ +DLNLL +LM+ERSVT+AA R+ T SA+S SL +LR F D LF Sbjct: 3 EFSLNQIDLNLLRTFDVLMRERSVTRAADRLGRTQSAISHSLGRLRDVFKDDLFTREAGI 62 Query: 62 LSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQI 119 + PT + + +++ + + +D+ + P F + + L L + Sbjct: 63 MEPTARAKELAEVISQALHEIRVAVDRHLNFDPTTTSRNFRIGLSDYTAVTYLPELIENF 122 Query: 120 YQRYPQATIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSD 178 P A++ + + + D+L ++ EV+ G + L D Sbjct: 123 SMLAPNASLNVVHAREPDALGSLKNREVECAVLGNPKLDAE---------HFEVVELSRD 173 Query: 179 VPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEF 238 +PA+ +LD +L PH+ I + D LQ+LG R + ++P + Sbjct: 174 RMVCAGWTGNPAMAD-MSLDRYLASPHLQISADGIAAGVADITLQKLGLHRKVVATIPHY 232 Query: 239 EQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRN 298 + ++ + L+ A ++ + +V PL +V +L++ + N Sbjct: 233 LVAPWVIKGTE-LISAFGDGVLLALSEESETAIVPPPLELP-------DVTISLIFDRSN 284 Query: 299 SHNPKIVWLRETIKNLYAS 317 +P VW R IK++ Sbjct: 285 ELDPGHVWFRNLIKDVSDR 303 >UniRef50_B5XYZ1 Transcriptional regulator, LysR family n=5 Tax=Klebsiella RepID=B5XYZ1_KLEP3 Length = 308 Score = 263 bits (672), Expect = 7e-69, Method: Composition-based stats. Identities = 68/312 (21%), Positives = 125/312 (40%), Gaps = 21/312 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 LD L L + +V+ AA +N++ S L KLR F DPLFV + PTP Sbjct: 5 LDFKSLRFFSALYRLGNVSPAADALNISQPTGSLLLKKLRDHFADPLFVRVGQRMMPTPR 64 Query: 68 MVSMEQNLAEWMQMSNL--LLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYP- 124 ++ + +Q+++ + F + M +L L + Q+ Sbjct: 65 ADAIAPTVFTLLQLADNDLAVKPEFLPQQSQRNFTIGMTDISQMTLLPLLQIALQQQAAD 124 Query: 125 QATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 T ++N D +L+A+ G+ D+ L+ LP ++ + LF Sbjct: 125 GITFTIQNLDEQTLNALESGKCDLAIGY----------LTQLPDSVYQQHLFDQSYVCLA 174 Query: 185 RKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 ++HP + + + + H++I E + +D L E R IA++LP F + + Sbjct: 175 AENHPRIRTQLRAEDWRQEKHLAIRVEGTAHGDMDKRLDEHSMPRRIALTLPSFLGTGEL 234 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 A+ D + + + ++ + + LP P + +WH+R +P Sbjct: 235 VAESDMIAVV-PEQVARHITRRYPCRSWPLPFPL-------ARIAIRQVWHQRLHRDPGH 286 Query: 305 VWLRETIKNLYA 316 +WLR I L Sbjct: 287 IWLRSLIAALAD 298 >UniRef50_Q0BYJ0 Transcriptional regulator, LysR family n=1 Tax=Hyphomonas neptunium ATCC 15444 RepID=Q0BYJ0_HYPNA Length = 297 Score = 263 bits (672), Expect = 9e-69, Method: Composition-based stats. Identities = 69/315 (21%), Positives = 135/315 (42%), Gaps = 25/315 (7%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 ++ +LDLNLL L+ + ERS+T+A++ +++T AVS +L++LR F+DPLFV G+ Sbjct: 1 MNLRSLDLNLLPVLEAIYAERSLTRASEVLHITQPAVSNALSRLRLHFEDPLFVREGRGV 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTP--RGLKFELAAESPLMMIMLNALSKQIY 120 PT + ++ + E + L+ P F +++ I+ +++++ Sbjct: 61 KPTAMTEALMPAIRESLDKLRNGLEPRSVFEPSRSTRVFNISSRDASAHILAPPIARRLE 120 Query: 121 QRYPQATIK-LRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 + P I + + G +D+ ++ ++ +L S Sbjct: 121 VQAPGVRISWSQPQRSAIASELASGRLDLAIDVQDLRG----------ADLERVLLSSTK 170 Query: 180 PCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFE 239 L DHP ++ LD F HI++ + ++ + + LG T LP ++ Sbjct: 171 YVCALASDHPLANEPLTLDKFFSMRHIAVSSRREGRSLIEEMARSLGHRITPVHRLPHYQ 230 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 +L + L A P + L ++ LP F L WH+ + Sbjct: 231 PALEVVRCTHLALAAPQP-----VTEGSGLAVMKLPFDFPSPGSM-------LYWHREYA 278 Query: 300 HNPKIVWLRETIKNL 314 +P ++WLR I+++ Sbjct: 279 QDPALMWLRGLIRDV 293 >UniRef50_D1SW87 Transcriptional regulator, LysR family n=1 Tax=Acidovorax avenae subsp. avenae ATCC 19860 RepID=D1SW87_9BURK Length = 330 Score = 262 bits (671), Expect = 1e-68, Method: Composition-based stats. Identities = 68/321 (21%), Positives = 122/321 (38%), Gaps = 23/321 (7%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 +I ++DLNL L Q + RSVT A +R+ +T SAVS +L ++R F+D LFV S G+ Sbjct: 1 MNIHSIDLNLFLVFQAIFATRSVTLAGERLGMTQSAVSNALKRMRERFNDVLFVRSAEGM 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQT--PRGLKFELAAESPLMMIMLNALSKQIY 120 PTPL + + E + + +D+ G F +A ++M+ L Sbjct: 61 VPTPLAERLIGPVEEGLAAFSQAVDQGRTFEAGTSGRLFRIAVNDIGQLVMMPRLLSLAR 120 Query: 121 QRYPQATIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 P + + ++ + G++D+ E + + + LF + Sbjct: 121 GLAPGIRFETVDVPRAEARQRMLHGQIDVALGSWEP----------MGPSFYQQRLFDET 170 Query: 180 PCVWLRKDHPA-LHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGR--ERTIAMSLP 236 V + + P + LD +L HI+ + L L+ +G R + ++ Sbjct: 171 FVVLVARASPLGTRDSIALDDYLAAEHIAYRPRGTTDHQLQQALERVGALDRRRVVLTAA 230 Query: 237 EFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHK 296 + A +L A L ++ P + WH+ Sbjct: 231 HSLGLSSIVATTGLVLTAPQRLAQAMVASRSDLHILNAPFEV-------APFEISQQWHE 283 Query: 297 RNSHNPKIVWLRETIKNLYAS 317 R + WLRE + L+ Sbjct: 284 RFHQDSGNRWLRELMFGLFHE 304 >UniRef50_D2B6V0 LysR family transcriptional regulator n=5 Tax=Actinomycetales RepID=D2B6V0_STRRD Length = 313 Score = 262 bits (671), Expect = 1e-68, Method: Composition-based stats. Identities = 75/312 (24%), Positives = 128/312 (41%), Gaps = 20/312 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 LDLNLL+ L L++E SV AA R+N + A+S++L ++R +DP+ V + L PTP Sbjct: 2 LDLNLLVALDALLEEGSVAGAAARLNTSAPAMSRTLGRIRRQLNDPVLVRAGRHLVPTPR 61 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQIYQRYPQ 125 + + + + ++ ++ LL P F L A L+ + L + QR P Sbjct: 62 ALELHAAVRDLVRQASALLVPAGDPAPATLARTFNLQASDMLLSALAAPLVLAVGQRAPG 121 Query: 126 ATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 ++ + A+ G VD+ ++ E L + R Sbjct: 122 VVLRFLPDTLEGTSALREGRVDLEIG----------VIDHAAPETCVEPLGTGRIVGMAR 171 Query: 186 KDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMA 245 +DHP + + L F H+ + +D++L G R A+++ +L +A Sbjct: 172 EDHPLVIKGVTLRRFADAKHVGVSRHGRLHGPIDDLLAARGLRRRTAVTVSSHSMALLLA 231 Query: 246 AQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIV 305 Q D + LA AP L +PL EV + WH RN + Sbjct: 232 RQSDLVCLAPAPAD-DDLPAALGLRAFEIPLELP-------EVEVAMAWHPRNDADGGQR 283 Query: 306 WLRETIKNLYAS 317 WLR+ ++ + Sbjct: 284 WLRDQVREVLRG 295 >UniRef50_Q9FD34 PnbR n=2 Tax=Pseudomonas RepID=Q9FD34_PSEPU Length = 348 Score = 262 bits (670), Expect = 1e-68, Method: Composition-based stats. Identities = 74/340 (21%), Positives = 124/340 (36%), Gaps = 43/340 (12%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 LDLNL+ +M+ERSV +A++R++++ SAVS +L++LR +FV + G+SP Sbjct: 23 FDKLDLNLIRVFDAVMEERSVLRASQRLHLSQSAVSHALSRLREGLGQEIFVRTGKGMSP 82 Query: 65 TPLMVSMEQNLAEWMQMSNLLLDK---PHHQTPRGLKFELAAESPLMMIMLNALSKQIYQ 121 T + + L + + L + P F +AA + +L L+ Q+ + Sbjct: 83 TSYALEISGALHAALLSMSKALSQAATPFSPQSVCRSFVIAANDYVSATLLPQLNHQLSK 142 Query: 122 RYPQATIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 P +++ D + I G +D+ S P VLF D Sbjct: 143 VAPGIDLQITPATRLDLAEQIDLGRIDVAIGTFRSVPERFRTKP---------VLFQDE- 192 Query: 181 CVWLRKDHPALHQTWNLDTFLRYPHISICWEQSD---------------------TWALD 219 HP L +RYP + AL+ Sbjct: 193 VFICSGTHPISANKPQLQDLVRYPLAVVSLGGEGEGMLSGYILERGLARQAQMYDRTALE 252 Query: 220 NVLQELGRERTIAMSLPEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFD 279 L E G + LP F + + L + P + + + + LP P Sbjct: 253 QALNEAGLSMRRQIVLPHFLALPMLLEGSELLAIVPQP-LARTFARTLGFKIKPLPYPAA 311 Query: 280 ESQQKKLEVPFTLLWHKRNSHNPKIVWLRETIKNLYASMA 319 Q L+WH N ++P +WL E I ++ Sbjct: 312 RQQ-------LDLIWHSSNDNDPAQLWLHEQISEAANEIS 344 >UniRef50_B2JFW9 Transcriptional regulator, LysR family n=39 Tax=Burkholderia RepID=B2JFW9_BURP8 Length = 342 Score = 261 bits (669), Expect = 2e-68, Method: Composition-based stats. Identities = 76/314 (24%), Positives = 127/314 (40%), Gaps = 23/314 (7%) Query: 6 TTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPT 65 +LD+ L+ L+ L+ ERSVT+ A R+N T A+S +L KLR +DP+ V G+ PT Sbjct: 7 ASLDIWLVRVLRTLLVERSVTQTALRLNQTQPAISTALRKLRETLNDPILVRGKSGMVPT 66 Query: 66 PLMVSMEQNLAEWMQMSNLLLDKPHHQTPR--GLKFELAAESPLMMIMLNALSKQIYQRY 123 S+ + ++ + + P F +AA L + + Q + Sbjct: 67 EYGESLLAAAQKVLRDVDFVATPHGDFDPARSRRTFRIAAPDYLNDFFMPTVIAQFRETA 126 Query: 124 PQATIKLRNWDY--DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPC 181 P A +++ + D A+ GE+D+ L + LFSD Sbjct: 127 PHARLEIESLGPLFDHTCALDAGELDLVIGNWPKP----------DLRFERSDLFSDTVV 176 Query: 182 VWLRKDHPALHQTWNLDTFLRYPHISI-CWEQSDTWALDNVLQELGRERTIAMSLPEFEQ 240 +R DHP D +L PH++ + + A+D R I +LP F Sbjct: 177 CMMRADHPLAKAPLTRDAYLAAPHLAPAHYSGARGGAIDTGFARARASRRIVATLPYFGL 236 Query: 241 SLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 + Q D + T R+ +Y + L +V +P+PF + +WH + Sbjct: 237 VPQVLLQSDLIFTTT-RRFALHYAAMLPLAVVDVPIPFPRIKC-------YQMWHPQPDR 288 Query: 301 NPKIVWLRETIKNL 314 I WLR + + Sbjct: 289 PSDIAWLRGLMAQV 302 >UniRef50_A4Z170 Putative transcriptional regulatory protein, LysR-family n=1 Tax=Bradyrhizobium sp. ORS278 RepID=A4Z170_BRASO Length = 313 Score = 261 bits (669), Expect = 2e-68, Method: Composition-based stats. Identities = 80/321 (24%), Positives = 130/321 (40%), Gaps = 27/321 (8%) Query: 1 MKKS----ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFV 56 MK + +DLNLL+ + L+ ER+VT+AA R+ + + SK+L +LR F DPLF+ Sbjct: 1 MKNDQMPSLAHVDLNLLVLFEALLSERNVTRAAVRVGLAQPSASKALDRLRHLFGDPLFL 60 Query: 57 NSPLGLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGLK--FELAAESPLMMIMLNA 114 +P G+ PTP + + +A ++ L+ P + LA ++L Sbjct: 61 RAPGGMRPTPRALELAPEIALVLERVRALVAAELPFDPATARGSLRLAMSDAAEFVLLPG 120 Query: 115 LSKQIYQRYPQATIKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYE 173 L Q+ P T++ R D D + G +D + LP Sbjct: 121 LVAQLAGTAPGVTLQARPLDKDRVFAELDEGRLDAVVG----------VFRELPKRFRSA 170 Query: 174 VLFSDVPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAM 233 LF + R DHP L L+T++ PH+ + A+D+ L+ +G R +A Sbjct: 171 PLFEERFVCLARADHPRLATGLTLETYVELPHLLVTLRDDRKGAVDDALEAIGLHRRVAA 230 Query: 234 SLPEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLL 293 +L F + A D +AT P L PL ++ L+ Sbjct: 231 TLTRFLALPPVLAFSD--AIATVPSRFAA-ASAPNCRLHEPPLALPRWTEQ-------LV 280 Query: 294 WHKRNSHNPKIVWLRETIKNL 314 W P I W + I++ Sbjct: 281 WRAGAEREPMIAWGLQLIRSA 301 >UniRef50_C0ZNV8 Putative LysR family transcriptional regulator n=1 Tax=Rhodococcus erythropolis PR4 RepID=C0ZNV8_RHOE4 Length = 298 Score = 261 bits (669), Expect = 2e-68, Method: Composition-based stats. Identities = 73/317 (23%), Positives = 122/317 (38%), Gaps = 24/317 (7%) Query: 1 MKKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPL 60 M + DLNLL L+ E SVT AA+R+N++ A S++L +LR DDP+FV + Sbjct: 1 MAMDM---DLNLLRVFDALVAEGSVTGAAERLNLSIPATSRALGRLRRAMDDPIFVRAGR 57 Query: 61 GLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPR--GLKFELAAESPLMMIMLNALSKQ 118 GL PTP + + ++ + LL + P F + + AL ++ Sbjct: 58 GLVPTPFALRAAPQVRSLLEGAQGLLIDRKNFEPAELERTFVIRINEGTAASLTPALVRR 117 Query: 119 IYQRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSD 178 P A I+ + +D++ G +D+ + E+L+ + Sbjct: 118 FAAEAPNAVIRCVGEGNEDVDSLRNGSIDLDIGADPLPSS----------DVCSEILYRE 167 Query: 179 VPCVWLRKDHPALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPE 237 + K P L +PH+S +D+ L +G R + + Sbjct: 168 GHVGLVSKSSPLARTAQPTLAQLCEHPHVSTSRRGRTHGPIDDALSAVGMRRRVIAVVAS 227 Query: 238 FEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKR 297 + MAA D + L R +Y+ + A+P V WH R Sbjct: 228 PVAAALMAADSDLVALV-PERLARYFAARLDVAWFAVPTELPA-------VTIHQQWHGR 279 Query: 298 NSHNPKIVWLRETIKNL 314 H+P WLRE ++ Sbjct: 280 LDHDPAHKWLREQVREA 296 >UniRef50_A0K340 Transcriptional regulator, LysR family n=1 Tax=Burkholderia cenocepacia HI2424 RepID=A0K340_BURCH Length = 303 Score = 261 bits (669), Expect = 2e-68, Method: Composition-based stats. Identities = 71/320 (22%), Positives = 131/320 (40%), Gaps = 22/320 (6%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 LDLNLL+ L L+ +R +T+AA+R+N++ SA+S LAKLR +FDD L V L Sbjct: 1 MRFNRLDLNLLVTLDALLDDRRITRAAERLNLSQSAISGMLAKLREYFDDELLVPVGRNL 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNL--LLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIY 120 TPL + Q + + + +D F++A ++ ++++ L I Sbjct: 61 ELTPLARELVQPVRDLLLQVQTIVAIDPAFEPANARRHFKIATSDYVINVLMHRLIPVIE 120 Query: 121 QRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 P T++L D+ + + RGE D ++ LF D Sbjct: 121 PLAPYLTLELMP-QEDAPERLRRGEYDFLIIPEPFKADDHPAIA----------LFDDSY 169 Query: 181 CVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALD-NVLQELGRERTIAMSLPEFE 239 + + A+ + ++ + + H++ + D ++ G R + ++ +F Sbjct: 170 VGVVWNGNRAVGASIDVARYEQLDHVATLLGWPRLPSYDSRYVEAQGIRRRVRVTTSDFT 229 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 + ++ R + L LV L P + ++ L WH+ Sbjct: 230 SMAPVLIGT-QMIATMHRRLATELTRRMPLRLVELEFPIPQMRE-------FLQWHEYRE 281 Query: 300 HNPKIVWLRETIKNLYASMA 319 +P WLRE I ++ A +A Sbjct: 282 KDPCHRWLREQIISVAAGLA 301 >UniRef50_C4I668 Transcriptional regulator, LysR family n=80 Tax=Proteobacteria RepID=C4I668_BURPS Length = 297 Score = 261 bits (669), Expect = 2e-68, Method: Composition-based stats. Identities = 69/305 (22%), Positives = 116/305 (38%), Gaps = 25/305 (8%) Query: 15 CLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSMEQN 74 L L+ E +VT+AA R+N++ +VS LAKLR F DPL + P G+ PT + + Sbjct: 14 TLDALLSEHNVTRAAARLNLSQPSVSIHLAKLRDIFGDPLLLPGPRGMRPTARADELREP 73 Query: 75 LAEWMQMSNLLLDKPHHQTPR--GLKFELAAESPLMMIMLNALSKQIYQRYPQATIKLR- 131 L ++ + P + +AA ++ + P + + Sbjct: 74 LRRALETLGRAVSPGAPFDPAASAHTWRVAASDYSESTVVLPALNGLRAAAPGTRLAVVE 133 Query: 132 NWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPAL 191 +G++D+ F E P + + LF++ + R HP L Sbjct: 134 TVPSRIAKQAEQGDIDLAFHITE----------CAPGNLRHRALFTERYVLVGRAGHPRL 183 Query: 192 HQTWNLDTFLRYPHISICWEQSD-TWALDNVLQELGRERTIAMSLPEFEQSLFMAAQPDN 250 + L F + H+ + + D L +LG R + +S+P F + A D Sbjct: 184 KRRPTLAQFCKLDHVIVSPDGGGFQGGTDQALAKLGLARRVVLSVPHFLFMMSAVANSD- 242 Query: 251 LLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWLRET 310 L+A P L +V P+ +LWH+R+ +P WLRE Sbjct: 243 -LVAMMPSRLVR--DSRALQVVEPPVDVP-------GFRMAMLWHERSHRDPAHQWLREH 292 Query: 311 IKNLY 315 I Sbjct: 293 IAASV 297 >UniRef50_A3YI62 Transcriptional regulator, LysR family protein n=2 Tax=Oceanospirillaceae RepID=A3YI62_9GAMM Length = 305 Score = 261 bits (668), Expect = 2e-68, Method: Composition-based stats. Identities = 59/318 (18%), Positives = 127/318 (39%), Gaps = 20/318 (6%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 + DLNLL+ + L+ E V++AA+++ ++ SA+S +L +LR DDPL V + GL+P Sbjct: 4 LRQFDLNLLIIFEALISECHVSRAAEKVFLSQSAMSHALNRLRTQLDDPLLVKTENGLTP 63 Query: 65 TPLMVSMEQNLAEWMQMSNLLLDKPHHQTP--RGLKFELAAESPLMMIMLNALSKQIYQR 122 TP ++M ++ + + + + F +A+ ++ Q+ Sbjct: 64 TPRALAMLPDVRQALNLVERTISPAESFQASLSDRTFRIASTDYFETVVFPEWFSQLQLS 123 Query: 123 YPQATIKLRNWDYDS-LDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPC 181 P +++ +S L + +GE+D+ + LP + + ++ Sbjct: 124 APNVRVEIDLISEESALLRLEKGEIDLIVGMDKE--------QKLPSHLIVQDWLTEKQV 175 Query: 182 VWLRKDHPALHQTWNLDTFLRYPHIS-ICWEQSDTWALDNVLQELGRERTIAMSLPEFEQ 240 + + +L+ +L PHI E +D L R S + Sbjct: 176 CLASIQNQNARGSLSLEAYLALPHIRFFDLEGKTDSNVDRWLASQTLARNHIASTTNYMA 235 Query: 241 SLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 + + A + + + + + Q+ + +V P + TL+ H + Sbjct: 236 AARIVANTEAI-ITLPYHMAKLFTQMMPVSIVTPPDGLPA-------IDMTLVQHPLYAK 287 Query: 301 NPKIVWLRETIKNLYASM 318 + I+WL++ + S+ Sbjct: 288 DSGIIWLKQVLCEHVKSL 305 >UniRef50_A6GJJ5 Regulatory protein, LysR:LysR, substrate-binding n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GJJ5_9DELT Length = 304 Score = 261 bits (668), Expect = 2e-68, Method: Composition-based stats. Identities = 68/304 (22%), Positives = 127/304 (41%), Gaps = 21/304 (6%) Query: 19 LMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSMEQNLAEW 78 L++E +VT+AA+ + ++ A+S LA+LR FDDPL + S G+ PT + + + +A Sbjct: 2 LVREGNVTRAARALGISQPAMSHRLARLRERFDDPLLLPSGAGMQPTARALQLVEPVARG 61 Query: 79 MQMSNLLLDKPHHQTP--RGLKFELAAESPLMMIMLNALSKQIYQRYPQATIKLRNWDYD 136 + + L P +F +A ++L +++ P+ +++ + Sbjct: 62 LLEFDAALRSEARFDPRTSTRRFTIACADFGDFVVLPRALSRLHAEAPEIEVRMCRPGPE 121 Query: 137 SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPALHQTWN 196 + RG +D+ G P + +R DHPA+ + Sbjct: 122 LERGLERGLIDVAVLGNPCLPA---------ANFRQRRVLDGRFATTVRADHPAVGPRMD 172 Query: 197 LDTFLRYPH--ISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQPDNLLLA 254 LDTF+ PH I+ E +D+ L +G R +A+ +P + + +A++ D +L A Sbjct: 173 LDTFVALPHLAIAPSSESDFGGVIDDALARVGEARRVAVRVPSYSTAPLLASRSDLVLTA 232 Query: 255 TAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWLRETIKNL 314 + L + PLP ++WH+R P WLR T+ + Sbjct: 233 PVGVILEA-ASFVSLRVFDPPLPIP-------PSDVRMVWHERWQREPGHAWLRTTLAEV 284 Query: 315 YASM 318 + Sbjct: 285 MTGL 288 >UniRef50_Q2CCM2 Transcriptional regulator, LysR family protein n=1 Tax=Oceanicola granulosus HTCC2516 RepID=Q2CCM2_9RHOB Length = 313 Score = 261 bits (668), Expect = 2e-68, Method: Composition-based stats. Identities = 85/324 (26%), Positives = 133/324 (41%), Gaps = 26/324 (8%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 ++ DLNLL L L++ERS T+AA R+ ++ AVS +L +LRA D LF+ GL Sbjct: 1 MNLAGFDLNLLKVLDALLRERSTTRAAARVGLSQPAVSAALGRLRAALGDELFLRRGQGL 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQIY 120 T ++E L E + LL P P F LA +++ L+ ++ Sbjct: 61 VATDFARALEAPLRETLDRLEDLLAAPQEFDPATAKRTFRLAGIDFFAEMLMPQLAARLA 120 Query: 121 QRYPQATIKLRNWDYDSLDA-ITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 P I+L N +A + R E D+ L+ P ++ +LF Sbjct: 121 AAAPGVRIQLLNLVPREYEATLERYEADVALFP----------LTGSPEWAEHRLLFRSP 170 Query: 180 PCVWLRKDHPAL-----HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMS 234 + +P L T LD F HI + + D+ L +GR+R + MS Sbjct: 171 FVLAAAAGNPRLAHLAEGDTVPLDLFCDLGHILFSLDGNLRAMGDDALAAVGRQRRVVMS 230 Query: 235 LPEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLW 294 + F L A + + L + + L ALP+P + ++W Sbjct: 231 MASFPGILRAVAGSEAVSLVPV-QLARKLQGEMGLRCFALPMPLEPPV-------IGMMW 282 Query: 295 HKRNSHNPKIVWLRETIKNLYASM 318 H+R+S P WLRE I L + Sbjct: 283 HRRSSATPAHAWLREQIVELMTPL 306 >UniRef50_A1UXD8 Transcriptional regulator, LysR family n=41 Tax=cellular organisms RepID=A1UXD8_BURMS Length = 355 Score = 261 bits (667), Expect = 3e-68, Method: Composition-based stats. Identities = 66/300 (22%), Positives = 125/300 (41%), Gaps = 20/300 (6%) Query: 15 CLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSMEQN 74 LMQE+++++AA R++++ AVS +L +LR +PLF + G++PT ++ + Sbjct: 59 VFDALMQEQNLSRAAIRLHMSQPAVSNALTRLRQQLGEPLFTRTARGMTPTAQARTLYEP 118 Query: 75 LAEWMQMSNLLLDKPHHQTPRGLK-FELAAESPLMMIMLNALSKQIYQRYPQATIKLRNW 133 + + + + + L P F+L+ ++L L I R P + +++ Sbjct: 119 VRQALYLLQIGLGPQADFEPDTHHLFKLSMNDYGQTVLLPDLLAHIKSRAPNVMLSVQSD 178 Query: 134 DYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPALH 192 D S+ +T G +D+ L + YE L + V R HPA Sbjct: 179 DAGSIPAQLTTGTLDLAIDY----------LHFDNPELCYEPLHEEHLVVIGRAGHPAFA 228 Query: 193 QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQPDNLL 252 L + H+SI L+ VL R + + +P + + A+ D L Sbjct: 229 GGLALRGYEESGHVSIQPRDRRGSPLEIVLGSARVRRVVHLQVPHYLTIPALVAKSDLLG 288 Query: 253 LATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWLRETIK 312 R + + ++ L + LP+ + +L+WH++ P + WLRE + Sbjct: 289 -TIPRRLAERFADVYALQIAPLPIDI-------APIQVSLIWHRQQDAQPGLRWLREQVV 340 >UniRef50_A6CYZ8 Hypothetical transcriptional regulator, LysR family protein n=1 Tax=Vibrio shilonii AK1 RepID=A6CYZ8_9VIBR Length = 304 Score = 260 bits (666), Expect = 4e-68, Method: Composition-based stats. Identities = 77/312 (24%), Positives = 135/312 (43%), Gaps = 22/312 (7%) Query: 9 DLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLM 68 +LNLL L++L+ E+ V++AA+R+N+T SAVS+ L++LR + DPL V + TP Sbjct: 6 NLNLLYTLEVLLAEKHVSRAAERLNLTQSAVSRQLSQLRDIYHDPLLVRNGNHYVLTPRA 65 Query: 69 VSMEQNLAEWMQMSNLLLDKPHHQTPR--GLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + L + Q +L + P F ++ + +L L + + P Sbjct: 66 ERLGAELEDLFQNITKVLGQA-DFDPLLFDQTFTFSSSDYVAQYILPELVELLSSLAPTM 124 Query: 127 TIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRK 186 R W+ D+L ++ E+D+ + +L PL + + + D+P + RK Sbjct: 125 QFAYRLWEPDNLAKLS--EIDV--------QLASTMLPEAPLGLSSQQIGEDIPVIVTRK 174 Query: 187 DHPALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMA 245 +HP +T YPHI I LD ++ +R I +S P F + + Sbjct: 175 NHPLSGTKTITEQELGAYPHIRISGGGDKDSFLDREMKARSLKRRILVSTPFFSSAFALL 234 Query: 246 AQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIV 305 Q D LL + +L ++ +P + L+WH + H P + Sbjct: 235 QQTDALLTVPL-HIAVNLKKTQKLHVIDIPFTVPT-------YKYWLIWHPKYDHEPAHI 286 Query: 306 WLRETIKNLYAS 317 W RE + ++ S Sbjct: 287 WTREHVLSIMRS 298 >UniRef50_B9JQ31 Transcriptional regulator n=1 Tax=Agrobacterium radiobacter K84 RepID=B9JQ31_AGRRK Length = 296 Score = 260 bits (666), Expect = 4e-68, Method: Composition-based stats. Identities = 66/313 (21%), Positives = 121/313 (38%), Gaps = 22/313 (7%) Query: 9 DLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLM 68 DLNL+ + + SV+ AA ++N+T +VS +L++LR DD LF + G+ PT + Sbjct: 3 DLNLIRAFIAIYETESVSGAAVKLNLTQPSVSHALSRLRDMLDDTLFTRTRDGMKPTFVA 62 Query: 69 VSMEQNLAEWMQMSNLLLDKPHHQTP--RGLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 M + + P F+LA M L + ++ Q P+ Sbjct: 63 ERMYGIFRSALSEIETAIASRWSFDPKSSNQVFKLAFSDLGEMTFLPHILPRLSQEAPKV 122 Query: 127 TIKLRNWDYDSLDA-ITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 I++ + + LD G++D S E +F + + Sbjct: 123 GIEVVELEVEKLDDWFATGKIDAAIFNSTSAKVQS----------RSEPIFQERYVCLVS 172 Query: 186 KDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMA 245 HP + +L+ +L HI + S +++ ++ +G R +++ LP F + Sbjct: 173 ARHPRIRDQVSLEQYLSEGHIVVSSH-SGHRQVEDQIRAIGAARQVSLRLPHFTGLHDIV 231 Query: 246 AQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIV 305 A+ + LL R + + +PLP E L W + + Sbjct: 232 AKTE-LLATLPSRTAHMFASSGMVKYCTIPLPIP-------EFEVRLHWRETDGEIEAQA 283 Query: 306 WLRETIKNLYASM 318 WLRE +K+ + Sbjct: 284 WLREILKSCLQGL 296 >UniRef50_A3VWI6 Transcriptional regulatory protein n=1 Tax=Roseovarius sp. 217 RepID=A3VWI6_9RHOB Length = 314 Score = 259 bits (664), Expect = 6e-68, Method: Composition-based stats. Identities = 67/312 (21%), Positives = 130/312 (41%), Gaps = 23/312 (7%) Query: 9 DLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLM 68 DLNLL ++M ER++T+AA R+N+T +VS ++ +LR D LF+ G+ PT Sbjct: 8 DLNLLRIFHVVMLERNMTRAAARLNMTQPSVSNAIQRLREVLADDLFIKVSGGVVPTAKA 67 Query: 69 VSMEQNLAEWMQMSNLLLDK-PHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQAT 127 ++ + +Q +D + F +A + ++ ++ ++ P + Sbjct: 68 EAIWPTIRNSIQSLIQTIDPERFEPSVATDSFRIAMSDFVATQLILPVAGPLFNAAPHVS 127 Query: 128 IKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRK 186 + L D + + G+ D+ ++ I +L + +RK Sbjct: 128 LVLCQNSVDNIVPGLIDGQFDMA----------AGVIPYKEARIRSILLKTLTYVCAMRK 177 Query: 187 DHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAA 246 DHP + F+ H+ + +D L + G R IA+++ + + + + Sbjct: 178 DHPLAKEPLTFADFMAARHLQVSLSGRS-GFIDRYLTDRGMFRDIALTIRHYTLAPEILS 236 Query: 247 QPDNLLLATAPRYCQYYNQLHQ-LPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIV 305 D L+A P ++ + L A P+P E +LLWH+RN P Sbjct: 237 STD--LIAILPSEVISHSHQYDLLKTTAPPIPVYED-------SISLLWHERNDAMPAHR 287 Query: 306 WLRETIKNLYAS 317 W+RE + ++ + Sbjct: 288 WMRERLIDIVKA 299 >UniRef50_D2C014 Transcriptional regulator, LysR family n=1 Tax=Dickeya dadantii Ech586 RepID=D2C014_DICD5 Length = 303 Score = 259 bits (664), Expect = 7e-68, Method: Composition-based stats. Identities = 71/298 (23%), Positives = 120/298 (40%), Gaps = 25/298 (8%) Query: 23 RSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNS--PLGLSPTPLMVSMEQNLAEWMQ 80 +++T AA R+ ++ A+S L++LRA F D LF+ S G+ PTP S+ +A + Sbjct: 22 QNITHAAARLGISQPAMSARLSRLRATFGDQLFIPSPHGRGVLPTPRAESLRPQIASVLH 81 Query: 81 MSNLLLDK-PHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQATIKL-RNWDYDSL 138 + +L+ F +A +++ L Q + P ++ Sbjct: 82 DISAMLEPIHFDAASSSRTFVIALHENPALMLGADLVNQFSEAAPGIRLRFALPESARLP 141 Query: 139 DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPALHQTWNLD 198 + + G++DI + A LF D RK HP +L Sbjct: 142 EQLETGDIDIYIGVN----------AGAHDAWIRRKLFDDEFATAQRKGHPRGSAPLDLK 191 Query: 199 TFLRYPHISICWEQS-DTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQPDNLLLATAP 257 ++ PH+ + E T +D L LG +R++ MS + + + A D LL Sbjct: 192 SYCALPHLVVSSEGDPFTGFVDQTLAGLGYQRSVVMSTQSYAMAPPIVAGTD-LLCTLPR 250 Query: 258 RYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWLRETIKNLY 315 R Q + Q L + PLP + ++ WH +NSH+P VWLR + Sbjct: 251 RMLQRFTQT--LDIFDPPLPL-------QPIVISMYWHPKNSHDPANVWLRAQLLCAA 299 >UniRef50_Q7WJY9 Probable LysR-family transcription regulator n=1 Tax=Bordetella bronchiseptica RepID=Q7WJY9_BORBR Length = 329 Score = 259 bits (663), Expect = 1e-67, Method: Composition-based stats. Identities = 74/319 (23%), Positives = 133/319 (41%), Gaps = 23/319 (7%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 + +D+ LL L +LM ERSV++ A R++V+ AVS +LA+LR FDDPL + S G+ P Sbjct: 22 MDNIDIKLLRTLLVLMSERSVSRTADRLDVSQPAVSHALARLRILFDDPLLLRSRAGMVP 81 Query: 65 TPLMVSMEQNLAEWMQMSNLLLDKPHHQTP--RGLKFELAAESPLMMIMLNALSKQIYQR 122 T +E + + + L +P P F L+A +++ + + + Sbjct: 82 TDRASEIEARVRRLLAEYDALAHRPQPFDPSVSERHFVLSAPEYAEHLLMPPIFRHLRAH 141 Query: 123 YPQATIKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPC 181 P +++R D + + + + GEVD+ + L ++ LF D Sbjct: 142 APNIRVEVRAPDPERAYELLESGEVDLRIA----------WLRKPAQSLRSMQLFQDRIV 191 Query: 182 VWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTW--ALDNVLQELGRERTIAMSLPEFE 239 +DHPAL T +L FLRYPH + +D ++ LG++ + F Sbjct: 192 CIADRDHPALDGTLSLADFLRYPHARPWGMGRNMSGRVIDEAVELLGKKLAPPFLVQNFL 251 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 + D L + + + ++ +PL + + WH+R+ Sbjct: 252 TIPYTITGSDLLA-VLPLVLARAFAAQQPIQILEVPLRLPRMR-------YGAYWHERSH 303 Query: 300 HNPKIVWLRETIKNLYASM 318 + WLR + + Sbjct: 304 KDVGHKWLRSVVLQAAQGL 322 >UniRef50_B4ELV6 LysR family regulatory protein n=1 Tax=Burkholderia cenocepacia J2315 RepID=B4ELV6_BURCJ Length = 306 Score = 259 bits (662), Expect = 1e-67, Method: Composition-based stats. Identities = 67/299 (22%), Positives = 122/299 (40%), Gaps = 17/299 (5%) Query: 22 ERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSMEQNLAEWMQM 81 ERSVT+A R+ +T A S++L +LR D + V +P GL TP S+ Q ++ + Sbjct: 23 ERSVTRAGMRLGLTQPAASRALGRLRTLLHDRVVVRTPKGLEFTPRAASLAQRVSRVLTE 82 Query: 82 SNLLLDKP-HHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQATIKLRNWDYDSLDA 140 + ++ F +A+ + + ++ ++ ++ + P + + ++++ Sbjct: 83 AAGIVAPAVFDPATARGLFSIASLDHMALTLIPDVNARLERSAPGLDLDVPPSRSNNVEL 142 Query: 141 ITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPALHQTWNLDTF 200 +T G I + +LP I L+ D +R HPAL F Sbjct: 143 VTDGTAGIALGVFDDD--------TLPAGIYRRKLYDDNLVCIVRNGHPALSARLTPKRF 194 Query: 201 LRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQPDNLLLATAPRYC 260 H+ + +D L G R IAM LP F + + A+ D L+ R Sbjct: 195 AALSHVLVTIGGRGGELVDAALARQGLHRRIAMRLPHFLVAPMVVAKSDMTLV-LPQRLA 253 Query: 261 QYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWLRETIKNLYASMA 319 ++ + LV LP+ +++WH+R +P WLR+ I + M Sbjct: 254 RHVALSMPVTLVKLPVEVP-------SFSPSMIWHERTHDDPAHGWLRQQIVEVAREMG 305 >UniRef50_A7JRS0 Possible LysR family transcriptional regulator n=3 Tax=Mannheimia haemolytica RepID=A7JRS0_PASHA Length = 302 Score = 259 bits (662), Expect = 1e-67, Method: Composition-based stats. Identities = 71/316 (22%), Positives = 129/316 (40%), Gaps = 24/316 (7%) Query: 4 SITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLS 63 I TLD NLL +L+ E +V++AA+R+++T A+S L +LR F+DPLFV G+ Sbjct: 3 DIRTLDFNLLKAFVVLLDECNVSRAAQRLSITQPAMSGILNRLRESFNDPLFVRVQHGMQ 62 Query: 64 PTPLMVSMEQNLAEWMQMSNLLLDKP-HHQTPRGLKFELAAESPLMMIMLNALSKQIYQR 122 PT + + Q +Q + +L P + +AA + I+ L ++ + Sbjct: 63 PTDRALQLGQTARNILQDISSMLQPPILEPEHLNMTLRIAAMDYVQQIIALPLILRLRRL 122 Query: 123 YPQATIKLRNWDYDSLDAI-TRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPC 181 P + L ++ + + ++D+ R+ L VL+ + Sbjct: 123 APNVKVALLPVQGQNIKTLFEQKKIDLALVSRQH----------LSTDTLKTVLYEERYV 172 Query: 182 VWLRKDHPALHQTWNLDTFLRYPHISICW-EQSDTWALDNVLQELGRERTIAMSLPEFEQ 240 + K HP +LD F P + + + A D LQ++G +R + +S+ Sbjct: 173 CAMSKTHPMAQTPLSLDQFCNLPFAMLSYNGGEFSGATDLALQKIGLQRKVMVSVNHISL 232 Query: 241 SLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 + D L+A P L + L P+ + + WH+R Sbjct: 233 LPQLLQGSD--LVAVLPERLAK--TLPNVYLQPPPIEVE-------GFTMMMAWHERTEQ 281 Query: 301 NPKIVWLRETIKNLYA 316 + WLRE ++ + Sbjct: 282 DTAHRWLREVLQGVVK 297 >UniRef50_Q081Z6 Transcriptional regulator, LysR family n=1 Tax=Shewanella frigidimarina NCIMB 400 RepID=Q081Z6_SHEFN Length = 303 Score = 258 bits (661), Expect = 1e-67, Method: Composition-based stats. Identities = 69/315 (21%), Positives = 124/315 (39%), Gaps = 22/315 (6%) Query: 7 TLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTP 66 +DLNL + + E ++TKAA +N++ AVS SL KLR FDD LF+ + PTP Sbjct: 2 KIDLNLFVVFDAIYCEGNITKAASVLNLSQPAVSHSLGKLRTHFDDALFIRQGNEMRPTP 61 Query: 67 LMVSMEQNLAEWMQMSNLLLDKPHHQTPRGLK--FELAAESPLMMIMLNALSKQIYQRYP 124 + ++ ++ E + + L + P + F L+ L L L + + P Sbjct: 62 VAKNVIDDVREALHQLQVCLVQSRQFEPLTSRKSFSLSLHGSLEPYYLPILQQSLSLESP 121 Query: 125 QATIKL--RNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCV 182 + R + + + G++D+ L + I + L D V Sbjct: 122 SINLSSNKRVRRTELENKLASGDIDLAIDT----------LIPVSNNIMHTQLELDQLVV 171 Query: 183 WLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 RK+HPA++ +L T+L+ H+ + + D L +G R I++ + Sbjct: 172 VARKNHPAMNPDLDLATYLKLDHVLVSSRSTGPSLEDFELSRIGLHRKISLRCQHALSAC 231 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 + D LL Y+++ + + +P+ ++ L WH P Sbjct: 232 RVILNNDMLL-TLPKTAAAMYSKMLDIDIHPMPVELP-------DIGVHLYWHVNVDKEP 283 Query: 303 KIVWLRETIKNLYAS 317 WLR + Sbjct: 284 ANKWLRNKMIIAATE 298 >UniRef50_B7VQV6 Transcriptional regulator n=10 Tax=Vibrionales RepID=B7VQV6_VIBSL Length = 315 Score = 258 bits (661), Expect = 1e-67, Method: Composition-based stats. Identities = 67/308 (21%), Positives = 127/308 (41%), Gaps = 20/308 (6%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 + ++LNLL L +L++E V++ A+R+++T SAVS+ LA+LR DPL V L P Sbjct: 2 LGNINLNLLRSLHVLLEECHVSRTAQRLHITQSAVSRQLAQLRDLCGDPLLVRDGNKLVP 61 Query: 65 TPLMVSMEQNLAEWMQMSNLLLDK-PHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRY 123 T + ++ L + + + LLD P + LA+ + +L + ++ + Sbjct: 62 TNRALLLKGKLDDLLGEFDHLLDDKPFDPQDWQGELVLASSDYVAQYILPIIVSEVSKDA 121 Query: 124 PQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVW 183 P + R W + L+ + + + + P + L D Sbjct: 122 PHINLAYRLWQPNFLETLNESGIHLA----------SSMFPKKPDHVSSIKLGEDKSVCL 171 Query: 184 LRKDHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 +R HP Q+ + + + Y HI + D L++ G +R IA+ +P F + Sbjct: 172 MRASHPLAKQSAISSEDIVNYSHIKVTGGGDKDSYSDIALKKQGHKRRIALQVPFFSSAG 231 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 + Q D L++ + + +LP + + L+WH + ++ Sbjct: 232 NVLMQDDYLMIV-PEHIAYNLGRHLDVAYFSLPFETEMH-------TYWLMWHPKYDNDS 283 Query: 303 KIVWLRET 310 W RE Sbjct: 284 AHKWAREK 291 >UniRef50_Q15TE0 Transcriptional regulator, LysR family n=4 Tax=Alteromonadales RepID=Q15TE0_PSEA6 Length = 307 Score = 258 bits (661), Expect = 2e-67, Method: Composition-based stats. Identities = 68/321 (21%), Positives = 127/321 (39%), Gaps = 22/321 (6%) Query: 1 MKKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPL 60 M + +DLNL L L + QE S+T A KR++++ AVS +L++LR + DPLFV Sbjct: 1 MNMLHSKIDLNLFLILVAVYQEGSITGAGKRLHLSQPAVSHALSRLRDKYQDPLFVRHGR 60 Query: 61 GLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQT--PRGLKFELAAESPLMMIMLNALSKQ 118 + T L ++ + + L + + L I L+ Sbjct: 61 KMIATQLCQTIMPRVLSSVAELESTLHDIGDFDVHQYQREMKFGFRDILESIFFPELATD 120 Query: 119 IYQRYPQATIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFS 177 + P T+ R D A+ +DI ++L+ I + ++ Sbjct: 121 LMANTPNITVHSRQVSRLDMEAALESQALDIVI----------DVLTPTSNDIHHTLICD 170 Query: 178 DVPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPE 237 + + RK HP L +L +++ H + ++ S +D L + R A+ Sbjct: 171 EHFSLICRKGHPILSD-MSLANYIKAEHALVTFKDSAVNTVDMALAKHAVARKFALKCEH 229 Query: 238 FEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKR 297 + + + ++ D LL Y + Q + +V LP +P + WHK+ Sbjct: 230 YFAATSVISRCDMLL-TMPNAYARLLKQQMPVEVVPLPFEVPI-------LPVHMYWHKQ 281 Query: 298 NSHNPKIVWLRETIKNLYASM 318 H+P W+R+ + + + Sbjct: 282 AEHDPLNSWMRQKLLAIAKRV 302 >UniRef50_UPI0000383CFA COG0583: Transcriptional regulator n=1 Tax=Magnetospirillum magnetotacticum MS-1 RepID=UPI0000383CFA Length = 329 Score = 258 bits (660), Expect = 2e-67, Method: Composition-based stats. Identities = 82/320 (25%), Positives = 134/320 (41%), Gaps = 25/320 (7%) Query: 6 TTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPT 65 TLD+ + L +L+ E +V++AA+R+ VS +L +LR DPL V L PT Sbjct: 7 ATLDVRAMRTLLVLLTECNVSRAAERLGQAQPTVSLALKRLREMLGDPLLVRYGGSLVPT 66 Query: 66 PLMVSMEQNLAEWMQMSNLLLDKPHHQTPR--GLKFELAAESPLMMIMLNALSKQIYQRY 123 + ++ +L + + L P F LAA + L + L L + I + Sbjct: 67 ERGLDLKVSLEAILSEIDARLTPHPTFDPAHSDRTFRLAANNCLGSVFLPPLVRTIRRAA 126 Query: 124 PQATIKL--RNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPC 181 P T+++ D L + G +D P + L S Sbjct: 127 PGVTVEVGQTPPMEDLLRQMAEGAIDAVIGNWPQP----------PSHLRISTLLSTDIV 176 Query: 182 VWLRKDHPALH--QTWNLDTFLRYPHISICWEQSDT-WALDNVLQELGRERTIAMSLPEF 238 +R +H +L FL H+S +++ +D L ELG +R IA+++PE+ Sbjct: 177 CVMRPNHRLARREGRIDLADFLAEGHLSPTSDRNAQLSPIDGRLIELGLKRRIAVTVPEY 236 Query: 239 EQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRN 298 +M AQ D LL T + + Q LV P ++ + F +LWH Sbjct: 237 AMVPYMLAQSD-LLFTTGRHFAEQIAQSFAFSLVDAP-------EELGRMSFYMLWHDCK 288 Query: 299 SHNPKIVWLRETIKNLYASM 318 H+P WLR TI+++ A + Sbjct: 289 HHSPAHAWLRRTIRSVAADI 308 >UniRef50_A3RSL5 Transcriptional regulators, LysR family n=4 Tax=Ralstonia solanacearum RepID=A3RSL5_RALSO Length = 304 Score = 258 bits (660), Expect = 2e-67, Method: Composition-based stats. Identities = 80/315 (25%), Positives = 127/315 (40%), Gaps = 24/315 (7%) Query: 6 TTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPT 65 LDLNLL Q + Q R+VT AAKR N+T A+S +LA+LR F DPLFV SP G+ PT Sbjct: 4 KRLDLNLLGVFQAIYQTRNVTLAAKRHNITQPAMSNALARLREVFADPLFVPSPYGMRPT 63 Query: 66 PLMVSMEQNLAEWMQMSNLLLDKPHHQTPR--GLKFELAAESPLMMIMLNALSKQIYQRY 123 P + + ++ L P +F + + L AL +++ Sbjct: 64 PYAQQLAVPIDRALREVEQALAMSKGFDPASSDREFRMHLTDFAQVAFLPALLERLRALA 123 Query: 124 PQATIKLRNWDYDS-LDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCV 182 P+ I++ ++ L A+ G +D F + + + LF D V Sbjct: 124 PRVVIRVEALAEETILPALDEGRLDFAFG---------RMSKAAGQGVGRYTLFKDRYAV 174 Query: 183 WLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 +R HP + F IC A+++VL ++G IA+ LP F Sbjct: 175 LMRAGHPLAGHALSRKDFAAAGQALICTSG--HRAIEDVLVKMGA--HIALRLPSFLVVS 230 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 + D L++ R + ALP+ +L W + S +P Sbjct: 231 RIVETSD-LMVIVPARLAEQCAATGLFHTAALPVAMPA-------FDVSLFWSESRSADP 282 Query: 303 KIVWLRETIKNLYAS 317 W+R ++ L+ Sbjct: 283 AHAWMRGQLQQLFGQ 297 >UniRef50_Q46MT9 Regulatory protein, LysR:LysR, substrate-binding n=1 Tax=Ralstonia eutropha JMP134 RepID=Q46MT9_RALEJ Length = 334 Score = 258 bits (660), Expect = 2e-67, Method: Composition-based stats. Identities = 68/319 (21%), Positives = 119/319 (37%), Gaps = 21/319 (6%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 LDLN L+ L L+ RSV KAA+R+ ++ A S SLA+LR +F+D L V Sbjct: 1 MRFNKLDLNQLVVLDALLSTRSVGKAAERLFLSQPATSCSLARLREYFEDDLLVAVGKTQ 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPR--GLKFELAAESPLMMIMLNALSKQIY 120 TPL + + + + + + + P +F + + ++ + L+ + ++ Sbjct: 61 VLTPLALGLRKPVRDVLLQIQTITRARPSFDPATSTRRFIIESSDYVISVFLSQVIRRAA 120 Query: 121 QRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 + P LR + + + GE ++ + ++ E LF D Sbjct: 121 EAAPLMQFDLRAISPQTPEHLESGEAELLIAPEF----------AMVPGHPSEPLFEDTF 170 Query: 181 CVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRE-RTIAMSLPEFE 239 + D ++T+ HI + W D+ L G+ R + P F Sbjct: 171 SCLVSADSTVGQDGLTVETYFDAAHIGVEWGGGRRVTFDSRLIATGKRTRRQDVIAPSFT 230 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 + + D + R + Q L V P+ L W K Sbjct: 231 LVPALLSGTDRIA-TLPTRLAEQMAQRFGLRRVTCPIDLPA-------FSEHLQWQKYQE 282 Query: 300 HNPKIVWLRETIKNLYASM 318 +P IVWLRE ++ M Sbjct: 283 SDPAIVWLRELLRETAREM 301 >UniRef50_B7QWJ8 Transcriptional regulator, LysR family n=1 Tax=Ruegeria sp. R11 RepID=B7QWJ8_9RHOB Length = 320 Score = 258 bits (660), Expect = 2e-67, Method: Composition-based stats. Identities = 76/324 (23%), Positives = 133/324 (41%), Gaps = 26/324 (8%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 + TLDLNLL L + E S KA +R+ ++ SAVS +L++LR +DPLFV L Sbjct: 1 MNFATLDLNLLRVLDAVFAEGSTVKAGRRLGLSQSAVSGALSRLRHALNDPLFVRQGNQL 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGLK--FELAAESPLMMIMLNALSKQIY 120 T S+ +L + LL P H P F ++A +++ L + Sbjct: 61 VATEFAESLRHDLRAELDRLETLLSPPSHFDPATASGLFRISAADFFCDMLMPRLGDLLS 120 Query: 121 QRYPQATIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 ++ P +L + ++++ R + D+ + LP + E LF Sbjct: 121 RKAPGIRAQLLDLVPRHHVESLERQQADLALLPD----------TDLPDWMMREPLFRSE 170 Query: 180 PCVWLRKDHPAL-----HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMS 234 V R+ +PA + D F PH+ T D L ++GR R + M+ Sbjct: 171 YAVLARRGNPATKDLRHGERMPFDLFCSLPHVLFAPHGDLTAQSDEALAKVGRRRRVVMT 230 Query: 235 LPEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLW 294 +P F + ++ D + L + + ++ L L P+ D Q +W Sbjct: 231 VPVFSGVCRVVSESDLIGLLPL-QLARKVQPVYGLDLFVPPIAIDPIQLIG-------VW 282 Query: 295 HKRNSHNPKIVWLRETIKNLYASM 318 H++ P W+R+ I ++ + Sbjct: 283 HRKADTAPMAAWMRQQIFDILRPL 306 >UniRef50_C7RD08 Transcriptional regulator, LysR family n=1 Tax=Kangiella koreensis DSM 16069 RepID=C7RD08_KANKD Length = 319 Score = 258 bits (660), Expect = 2e-67, Method: Composition-based stats. Identities = 61/314 (19%), Positives = 131/314 (41%), Gaps = 18/314 (5%) Query: 4 SITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLS 63 +I +LD+NLL+ L +L++E+ ++ AA R++++ AVS+SL +LR +DPL + G Sbjct: 7 NIRSLDMNLLVLLDVLLEEKHISNAADRLHMSQPAVSRSLQRLRDMLNDPLLIRVGNGYQ 66 Query: 64 PTPLMVSMEQNLAEWMQMSNLLLDKP-HHQTPRGLKFELAAESPLMMIMLNALSKQIYQR 122 T + ++ L W+ ++ + + + M + + L + + + Sbjct: 67 LTDKALELQPKLKSWLADFMCMMQPEKFEPAKAKGEISIMSMDLEMSLFMPNLWQDLQVQ 126 Query: 123 YPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCV 182 P ++ N D + + +G++D S + S + + L + Sbjct: 127 APNVALRSFNIRPDGISLLEQGDIDFLVSEEDKSLESTK--------YHHYHLIQHEFVL 178 Query: 183 WLRKDHPALHQ-TWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQS 241 + K H Q +D +L+ H + +D L++ G R IA+ +P F + Sbjct: 179 VMSKQHRLAKQKAIGMDEYLKQRHGLVTVTGKGKPFIDRTLEKQGLSRNIALYVPTFHLA 238 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 L + ++ D L+ + + + + + + +PL + L WH+R Sbjct: 239 LDICSRTD-LMFSMPRLVAEKEGERYGVVMKEMPLKLPL-------LDIYLYWHERQHQT 290 Query: 302 PKIVWLRETIKNLY 315 W R ++ + Sbjct: 291 ALHKWFRTLMRESF 304 >UniRef50_Q5E7C7 Transcriptional regulator, LysR family n=5 Tax=Vibrionaceae RepID=Q5E7C7_VIBF1 Length = 330 Score = 258 bits (659), Expect = 2e-67, Method: Composition-based stats. Identities = 62/315 (19%), Positives = 116/315 (36%), Gaps = 21/315 (6%) Query: 4 SITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLS 63 + +DLNLL+ LM+ +SV+ AA ++ V SA+S SL++LR DPLF + Sbjct: 25 NWKAVDLNLLVAFSTLMETKSVSLAANKLFVGQSAMSHSLSRLRELLHDPLFERQGHQMI 84 Query: 64 PTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPR--GLKFELAAESPLMMIMLNALSKQIYQ 121 PT + + + + +Q + + K F++ ++ + I+Q Sbjct: 85 PTAKAIQLYPLVNKVLQTISGDILKVDTFEASEFTGTFKIGMTDYAELLFAADIFDAIHQ 144 Query: 122 RYPQATIKLRNWDYDSLDA-ITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 P A + D + +D+ + Y+ L+++ Sbjct: 145 LAPNAQLCFTTVDKANYQDRFDSEPLDLVIGSMKPEL----------KEFQYQTLYTEKH 194 Query: 181 CVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQ 240 LD ++ PH + + + +D L+ LG R+++++ F Sbjct: 195 VCMWDGQRHLFSSPITLDDYISLPHALVSPDGALKTGVDKELKALGVGRSVSVASKHFLT 254 Query: 241 SLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 + + D L+ P L L + L E E L+W RN Sbjct: 255 IRHLMKKRD--LICVVPELMAQ------LDLFSEKLVHSEPPINVGEFDIQLIWQTRNKE 306 Query: 301 NPKIVWLRETIKNLY 315 N + WL+E + Sbjct: 307 NKRYQWLKELLIQTI 321 >UniRef50_A1U796 Transcriptional regulator, LysR family n=3 Tax=Marinobacter RepID=A1U796_MARAV Length = 303 Score = 258 bits (659), Expect = 2e-67, Method: Composition-based stats. Identities = 74/320 (23%), Positives = 129/320 (40%), Gaps = 24/320 (7%) Query: 1 MKK-SITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSP 59 MK + +LDL L ++ E SV++AA R+ VT SAVS +L +LR F DPLFV S Sbjct: 1 MKPVDMLSLDLRSLATFVAVLDEGSVSRAAVRLGVTQSAVSHTLERLRQAFGDPLFVKSG 60 Query: 60 LGLSPTPLMVSMEQNLAEWMQMSNLL-LDKPHHQTPRGLKFELAAESPLMMIMLNALSKQ 118 G+ PT + ++ + + L P F +AA ++L L + Sbjct: 61 RGIVPTDYALRTGPHIRQLLDDLRTLPSGPPFEPASAEFTFTIAANDYQRDLLLPGLLRI 120 Query: 119 IYQRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSD 178 + Q+ P +++ + D + + D+ S I L +D Sbjct: 121 LRQQAPGIRLQVIPSGIPNADMLRKEACDLIISPHAPET----------TDIMQRGLMAD 170 Query: 179 VPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEF 238 V+ + + +L +L+ HI++ + + +N L G +R +++ F Sbjct: 171 RMVVFYDPNQ--RNAPTDLAEYLKADHIALMFATGERPGFENTLHAKGLDRRNVVTVANF 228 Query: 239 EQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRN 298 D L A Q +PLPFD +LWH+R+ Sbjct: 229 SGLPEFLRGTDMLATAPERMSAQLMR-----DFAWVPLPFD-----YKPFTLLMLWHRRH 278 Query: 299 SHNPKIVWLRETIKNLYASM 318 ++P W+R + ++ A+M Sbjct: 279 QNDPAHRWVRNQVNSVAATM 298 >UniRef50_D2YJX0 Transcriptional regulator, LysR family n=1 Tax=Vibrio mimicus VM573 RepID=D2YJX0_VIBMI Length = 314 Score = 258 bits (659), Expect = 3e-67, Method: Composition-based stats. Identities = 70/318 (22%), Positives = 132/318 (41%), Gaps = 23/318 (7%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 + DLNLL +M SV KAA ++N+T +AVS++L++LR +PLF+ GL P Sbjct: 15 LRDYDLNLLTVFDAVMTLGSVNKAADKLNMTSAAVSQNLSRLRDQVGEPLFIRQGRGLQP 74 Query: 65 TPLMVSMEQNLAEWMQMSNLLLDKPHHQTPR--GLKFELAAESPLMMIMLNALSKQIYQR 122 T ++M ++++ + L+ P +F + +++L L ++I + Sbjct: 75 TQYALNMHKHVSAGLSAIRFGLETNACFDPATSTREFVIGGHGYFDLVVLPQLLRKISEV 134 Query: 123 YPQATIKLRNWDYDSL---DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 P T+ L+ ++ D ++ E D+ + L +I + + Sbjct: 135 APHITVNLKPYEDDHFTPSQVLSEREADLFLAS----------LPISHPSIITTQIAEEA 184 Query: 180 PCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFE 239 V K+HP L +T F H ++ + + ++L + R + Sbjct: 185 LVVVYAKNHPRLGETLTFQQFFDEKHTALTSRRFGHYLFSSLLDQALPARKVHYQSDSML 244 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 + A+ D LL T R + + L + LP VP + WHK Sbjct: 245 NLMATASVTD-LLCFTPKRLADMWAEKLGLHIQPLPFEM-------RPVPTFMCWHKAKQ 296 Query: 300 HNPKIVWLRETIKNLYAS 317 + ++WLRE I+ +++ Sbjct: 297 QDKGLIWLREQIEEVFSQ 314 >UniRef50_A4SH82 Transcriptional regulator, LysR family n=2 Tax=Aeromonas RepID=A4SH82_AERS4 Length = 324 Score = 258 bits (659), Expect = 3e-67, Method: Composition-based stats. Identities = 70/318 (22%), Positives = 132/318 (41%), Gaps = 21/318 (6%) Query: 1 MKKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPL 60 M+ ++ LDLNLL +LMQER+VT+AA+R++++ S VS +L +LR DDPLFV S Sbjct: 1 MELPLSRLDLNLLTVFDMLMQERNVTRAAERLHLSQSTVSHALGRLRQALDDPLFVMSRR 60 Query: 61 GLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGLK--FELAAESPLMMIMLNALSKQ 118 + PT ++ + + + M L + P + F +A + ++ AL +Q Sbjct: 61 EMMPTERAKTLAGPVRQALAMLEQGLRQAEGFDPASARRIFRIATPGSVEHGLVPALVEQ 120 Query: 119 IYQRYPQATIKLRNW-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFS 177 ++++ P +++ D D + +GE+D+ +++ + E F+ Sbjct: 121 LHRQAPHCRLEVCELADSDYERELEKGELDLVIGFADAN--------HFSPRLWREPWFN 172 Query: 178 DVPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPE 237 + L + + PHI +D L G ER + + LP Sbjct: 173 NPLVCLSPLGS-ELPEVLGPAELVSRPHIHTSSWGHSQAMVDLWLARFGVERELGVRLPS 231 Query: 238 FEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKR 297 F + A L+ +++ + + L L L + + + H Sbjct: 232 FMAVPPLMA-TGRYLVVVPEMIGRHFCRYYPLRLHQLNPEIP--------IVYLMAGHPL 282 Query: 298 NSHNPKIVWLRETIKNLY 315 +H+ I W + + L Sbjct: 283 TAHDQAIGWFKGLLHRLA 300 >UniRef50_D1P3H6 Transcriptional regulator, LysR family n=1 Tax=Providencia rustigianii DSM 4541 RepID=D1P3H6_9ENTR Length = 303 Score = 258 bits (659), Expect = 3e-67, Method: Composition-based stats. Identities = 75/315 (23%), Positives = 132/315 (41%), Gaps = 27/315 (8%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 IT +DL L + L++ER+VT+AA ++ +T AVS L+KLR F D LF+ S GL P Sbjct: 4 ITRIDLKQLRVFKALLKERNVTRAAAQMGLTQQAVSAQLSKLRDTFQDHLFLRSAQGLIP 63 Query: 65 TPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQIYQR 122 TPL +E + + L P P F ++A + ++L L ++ + Sbjct: 64 TPLAEQLEPRVNTVFESI-AALSPPDRFDPAEVYTTFVISATDYAVAVILPRLMAKVRTQ 122 Query: 123 YPQATIKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPC 181 P + +R+++ D L +T G++D+ + + +P + LFS+ Sbjct: 123 APGLKLIIRDFESDRLYPLLTSGDLDLALTFP----------AFVPDGCQTKWLFSEHHI 172 Query: 182 VWLRKDHPALHQTWNLDTFLRYPHISICWEQSDT-WALDNVLQELGRERTIAMSLPEFEQ 240 R D P +Q + + P I + +++ + D+ G R I MS+P F Sbjct: 173 CVTRSDSPMQNQQFTISDIADLPQIIVSPTRANLIGSADDWFASKGYSRNIVMSVPSFAA 232 Query: 241 SLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 + A D +A P + + L P WH R++ Sbjct: 233 APACIASTDC--IAFLPSRILPNPLVRPIQLDDSP----------PSFDVIAAWHLRSNQ 280 Query: 301 NPKIVWLRETIKNLY 315 +P W+ ++ + Sbjct: 281 DPLHKWILSLLQQEF 295 >UniRef50_A8GZD3 Transcriptional regulator, LysR family n=22 Tax=Gammaproteobacteria RepID=A8GZD3_SHEPA Length = 335 Score = 257 bits (658), Expect = 3e-67, Method: Composition-based stats. Identities = 85/295 (28%), Positives = 145/295 (49%), Gaps = 9/295 (3%) Query: 23 RSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSMEQNLAEWMQMS 82 +SVT AA R++++ SAVSK L+KLR FDD LF + GL TP + + L E +Q Sbjct: 44 QSVTSAATRLHLSQSAVSKQLSKLRETFDDQLFERTAYGLKATPRALQLAPELREVLQKL 103 Query: 83 NLLLDKP-HHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQATIKLRNWDYDSLDAI 141 + +F + + ++ ++ PQ +I W + S++ + Sbjct: 104 DQFTRPSTFEPAESQRRFRMHIVETAYSLTYPYFMPKLLKQAPQVSINGHTWSHSSMEQL 163 Query: 142 TRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPALHQTWNLDTFL 201 R E+D+G RE RS +++LP + L D P LR+DHPAL + WN+DTFL Sbjct: 164 LRCEIDMGIICREWDKRSLLHMNNLPEELGAAELIRDYPVCLLRRDHPALKEPWNIDTFL 223 Query: 202 RYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQPDNLLLATAPRYCQ 261 +Y H+ + + + W LD+VL+ +R +A+++ +F ++ + D +L A +Y Q Sbjct: 224 KYRHLQVAFGGLEHWLLDDVLRLDHLQRDVAVNMTDFNCAMDLCENSDLILCA-PRKYIQ 282 Query: 262 YYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWLRETIKNLYA 316 + L + +P+ + + L+WHK + +P WLR I + Sbjct: 283 QMMVNYDLVCLDVPVHVE-------PGAYVLVWHKHFNLDPSHSWLRNLIIDGVR 330 >UniRef50_B4RWU1 Transcriptional regulator n=2 Tax=Alteromonas macleodii RepID=B4RWU1_ALTMD Length = 347 Score = 257 bits (658), Expect = 3e-67, Method: Composition-based stats. Identities = 65/306 (21%), Positives = 125/306 (40%), Gaps = 22/306 (7%) Query: 15 CLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSMEQN 74 +M E ++T+AA R+++T AVS +L+++R ++D LFV G+ PT ++ Sbjct: 2 IFDAIMTEGAITRAADRLSMTQPAVSNALSRMRTAWNDELFVKDGRGIQPTSFAKNLWSQ 61 Query: 75 LAEWMQMSNLLLDKP-HHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQATIKLRN- 132 + + + ++ + F +AA ++ ++ L K I P I Sbjct: 62 IQGPLGELEVAVNPTDFNPASAKRTFRIAATDNIVSMVWGPLRKVIENEAPGINIHAIPN 121 Query: 133 WDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPALH 192 +D ++ + E ++ FS + I E + V +R DHP Sbjct: 122 YDMETDKILKDAEAELTFSKYQEPGSV----------IRAEHVLDPSWVVVMRPDHPLAK 171 Query: 193 QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQPDNLL 252 +L+ F+ H+ + + D VL LG R +AMS+ +F + + + + L Sbjct: 172 SQLSLEDFVAADHLLVSVTGDVSGPTDQVLANLGLRRRVAMSVNQFHNATPLLKESN--L 229 Query: 253 LATAPRYC-QYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWLRETI 311 + AP + +L + P+ S P +++WHKR + + WLR + Sbjct: 230 ICVAPSLVMEKEIFSGELAVFETPIEIVSS-------PLSVMWHKRQDQDAGLQWLRGLV 282 Query: 312 KNLYAS 317 Sbjct: 283 VKFIRE 288 >UniRef50_Q88LJ0 Transcriptional regulator, LysR family n=1 Tax=Pseudomonas putida KT2440 RepID=Q88LJ0_PSEPK Length = 320 Score = 257 bits (658), Expect = 4e-67, Method: Composition-based stats. Identities = 56/297 (18%), Positives = 130/297 (43%), Gaps = 21/297 (7%) Query: 20 MQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSMEQNLAEWM 79 +E++++ AA+R+ ++ S SL +LR +F+D LF+++ G+ PTP VS+ +++ + Sbjct: 18 YREQNLSAAARRLGMSQPMASASLRRLREYFEDQLFLSTGRGMRPTPFTVSIAASVSGVL 77 Query: 80 QMS--NLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQATIKLRNWDYDS 137 + +L F ++ +I + + +++ + P ++ + + Sbjct: 78 ERIKHEILAKPAFQPRQSDRLFTISTSDIGALIFVPPILRRLGEDAPNTDLRCVSLPHQQ 137 Query: 138 LDA-ITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPALHQTWN 196 L+ + +G VD+ + + + LF +R++HP++ T + Sbjct: 138 LEQALEQGSVDLAVGYFPDLQGEQ---------VKTQALFEHNFTCIVRRNHPSIGDTLS 188 Query: 197 LDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQPDNLLLATA 256 L+ FL H+ + E + L+EL +R + + +P F + A + ++AT Sbjct: 189 LEQFLAADHLVVNQEGRSQEIFEQRLRELKLQRRVHLEVPHFMSVPQLIASTN--MVATV 246 Query: 257 PRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWLRETIKN 313 P + Q+ ++ P+ ++ L WH++ +P + W R + Sbjct: 247 PLSLGVWFASEQIKMLTPPIEVEK-------FELKLHWHRQMEDDPAVSWFRNAVFE 296 >UniRef50_Q399F7 Transcriptional regulator, LysR family n=1 Tax=Burkholderia sp. 383 RepID=Q399F7_BURS3 Length = 313 Score = 257 bits (658), Expect = 4e-67, Method: Composition-based stats. Identities = 65/317 (20%), Positives = 122/317 (38%), Gaps = 24/317 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +D +LL L L+ E SV++ A+ + + +S +L +LRA DPL V S + PT Sbjct: 6 IDAHLLKILHTLITESSVSRTAELLGQSQPTISVALRRLRAITGDPLLVRSGSRMVPTSH 65 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQIYQRYPQ 125 +++ + L + + +L+ P F + + L + L A+ P Sbjct: 66 AMTLVEPLDQALAGIAAVLNPASTFDPATTHRTFRIGSPDYLDVFFLPAIVDAFKHEAPG 125 Query: 126 ATIKLRNW---DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCV 182 A I+ ++ D A+ G +D+ S+ P + + L D Sbjct: 126 ARIEFQHLMTVDGGYEHALESGSLDLAVGNW----------STPPQQLHLQPLCRDDLVC 175 Query: 183 WLRKDHPALHQTWNLDTFLRYPHISI-CWEQSDTWALDNVLQELGRERTIAMSLPEFEQS 241 +R DH D + H+ + + +D L G R + ++P F + Sbjct: 176 VMRDDHRIRRGQLTADVYREADHLGVTTHHATGLGTIDRELARGGLSRNVTTTMPYFGMA 235 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 ++ + + LL T ++ L LPL + + + + LWH R + Sbjct: 236 PYVLMRSN-LLFTTTRTLATHFCSL-------LPLRIEPIPCEPQALTYYQLWHDRTHRS 287 Query: 302 PKIVWLRETIKNLYASM 318 VWLR + + + Sbjct: 288 AAAVWLRRLVSGVAKKL 304 >UniRef50_P52679 PCP degradation transcriptional activation protein n=1 Tax=Sphingobium chlorophenolicum RepID=PCPR_SPHCR Length = 307 Score = 257 bits (658), Expect = 4e-67, Method: Composition-based stats. Identities = 76/317 (23%), Positives = 129/317 (40%), Gaps = 23/317 (7%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 + + L L L+ L + S KAA +++ +S+ LA+LR FDDPLFV + G+ Sbjct: 1 MNDSVLPLGHLMVFDALYRHGSAGKAAHALSMPQPTLSRWLAQLRTHFDDPLFVRTRSGM 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTP--RGLKFELAAESPLMMIMLNALSKQIY 120 PTPL ++AE + + + P F +AA +ML L + Sbjct: 61 EPTPLAARAAPHIAEMIAIYRQHVRSELRFDPGTSNRNFRIAASDFGQALMLPRLYATLE 120 Query: 121 QRYPQATIKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 + PQ + N + L + + G +DI F G +L I + LF + Sbjct: 121 ETAPQVRVTGVNLRHGPLVEELESGSIDIAFGG----------FPTLSAGIKTQTLFREE 170 Query: 180 PCVWLRKDHPALHQTWNLDTFLRYPHISICWE--QSDTWALDNVLQELGRERTIAMSLPE 237 +R+ HPAL +L+ F + HI + ++ L EL +I + Sbjct: 171 YVCVMRQSHPALTHGLDLEAFRQCRHIIVTAHEFNHVHEQVEARLLELLPPESIRFTTEN 230 Query: 238 FEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKR 297 F S +A + D +L R +++ L + +P+ + WH+R Sbjct: 231 FLVSAVIAEETDVIL-TIPSRLARWFANRGGLTIFPVPIELP-------SIEVKQYWHER 282 Query: 298 NSHNPKIVWLRETIKNL 314 +P +WLR I + Sbjct: 283 YDKDPGNIWLRRVIAKI 299 >UniRef50_Q7D3I0 Transcriptional regulator, LysR family n=1 Tax=Agrobacterium tumefaciens str. C58 RepID=Q7D3I0_AGRT5 Length = 316 Score = 257 bits (657), Expect = 5e-67, Method: Composition-based stats. Identities = 57/328 (17%), Positives = 131/328 (39%), Gaps = 33/328 (10%) Query: 2 KKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLG 61 + + ++DLNLL + L+ + ++T A + I ++ A+S +L ++RA D LF + G Sbjct: 3 RFQLGSVDLNLLKVIYALVVKGNMTAAGEYIGLSQPAMSHALKRVRAITGDELFKKTSRG 62 Query: 62 LSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQI 119 T + + ++ + ++ + P F + ++++ L +++ Sbjct: 63 FVMTRFCTEIFPAVRRIIEDTETVMLQRLAFDPATSHRAFRIGMNDYFSVVLMPRLVERV 122 Query: 120 YQRYPQATIKLRNWDYDSL-----------DAITRGEVDIGFSGRESHPRSRELLSSLPL 168 +++ + + + + G +D+ E + P Sbjct: 123 RSEAEHCVLEVIHMPRTGISHNRDFMPVVQEHLNEGTIDVAVMTAE----------NFPA 172 Query: 169 AIDYEVLFSDVPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRE 228 LF++ + ++PA + LD L H+ + S +D L +G E Sbjct: 173 RYRCASLFTERRVCIMSANNPAAKEPLTLDALLSLGHVKVTSSPSRRGWIDERLDAMGLE 232 Query: 229 RTIAMSLPEFEQSLFMAAQPDNLLLATAP-RYCQYYNQLHQLPLVALPLPFDESQQKKLE 287 R + +P F ++ + ++ D L+A P + + + H+L L+ P ++ Sbjct: 233 RRVVAVVPHFSAAVAIVSRSD--LVAMMPESVAKLFERSHELLLLESPFEEEKQST---- 286 Query: 288 VPFTLLWHKRNSHNPKIVWLRETIKNLY 315 +++W +P +WLRE I + Sbjct: 287 ---SMIWLAEKERDPASLWLREQISACF 311 >UniRef50_B4E7M9 LysR family regulatory protein n=1 Tax=Burkholderia cenocepacia J2315 RepID=B4E7M9_BURCJ Length = 299 Score = 257 bits (657), Expect = 5e-67, Method: Composition-based stats. Identities = 75/316 (23%), Positives = 131/316 (41%), Gaps = 26/316 (8%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNS--PLGL 62 + D+ LL+ L +L++E +VT+AA+R+ ++ A+S LA+LR DDPL V + G+ Sbjct: 1 MKKHDMGLLVSLDVLLEEANVTRAARRLAISQPALSAQLARLRQVLDDPLLVPAERGRGM 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQIY 120 TP ++ L E + L++ P+ P F +A M + L + I Sbjct: 61 RLTPRAAQLKSPLHELLTRLEDLVEAPYAFDPSTAKRDFTIALNDNAAMTIGLDLIECIR 120 Query: 121 QR-YPQATIKLRNWDYDSLDAIT-RGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSD 178 ++ Y + + D + + RG +D+ R + +P + L D Sbjct: 121 KQSYAGIRLAMLQIPRDEVLDLAARGRIDLVIGTR----------AFMPPGLRTHDLVYD 170 Query: 179 VPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEF 238 V RK HP L+ + Y H+ + S +D+ L ELG R +S+ + Sbjct: 171 RFQVAQRKGHPRGTAAMTLEQYCAYEHVLVSTNGSYHSGIDDFLAELGHYRHTTVSVQYY 230 Query: 239 EQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRN 298 + + + L R+ ++ H + LP FD Q + WH R Sbjct: 231 TAVPPILERTNCLA-TLPERFLHRFD--HMIDRFDLPFAFDPFQLQVG-------WHPRF 280 Query: 299 SHNPKIVWLRETIKNL 314 + WLRE + + Sbjct: 281 DEDLGHQWLREQLIAV 296 >UniRef50_A1R1P0 Putative transcriptional regulator, LysR family n=1 Tax=Arthrobacter aurescens TC1 RepID=A1R1P0_ARTAT Length = 314 Score = 256 bits (656), Expect = 5e-67, Method: Composition-based stats. Identities = 69/318 (21%), Positives = 135/318 (42%), Gaps = 23/318 (7%) Query: 2 KKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLG 61 + ++ +DLNLL+ +LMQER VT+AA ++++T AVS +L +LR FDDPLF S G Sbjct: 6 ETNLRKIDLNLLVVFHVLMQERHVTRAAAKLHITQGAVSAALGRLRLLFDDPLFQKSRTG 65 Query: 62 LSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQI 119 + PT +++ + + ++ + L+ + P F +A L + + + + Sbjct: 66 MVPTAKALALAPRIGQSLKTVSDLVFQDEQFEPTTSNRTFHIAMSDDLEAVFVPKIVTEA 125 Query: 120 YQRYPQATIKLRNWDYDS-LDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSD 178 + + +A+ +D+ +P A + VLF+ Sbjct: 126 IRSNWNVKFSFHQTNSVLWQEALDDPRMDLVMCATP---------PQVPAAYHHSVLFAS 176 Query: 179 VPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEF 238 L + +L+ + H+ + ++ + +D +L+ G ER S+ F Sbjct: 177 SYTCLYDGQRMKLSEPLSLEDYAGSGHLRVSYD-AQRGFVDEILESQGYERKAVASISHF 235 Query: 239 EQSLFMAAQPDNLLLATAPRY-CQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKR 297 ++ + D L+AT P Y + ++ L + P+P +L+W Sbjct: 236 AGAVAVLRAAD--LIATIPTYTAKAFSDAAGLTMSQPPVPMP-------RFTISLIWEVP 286 Query: 298 NSHNPKIVWLRETIKNLY 315 P+ VWLR+ ++ Sbjct: 287 KETQPEHVWLRKMMQACA 304 >UniRef50_C6XR04 Transcriptional regulator, LysR family n=1 Tax=Hirschia baltica ATCC 49814 RepID=C6XR04_HIRBI Length = 302 Score = 256 bits (656), Expect = 7e-67, Method: Composition-based stats. Identities = 69/312 (22%), Positives = 124/312 (39%), Gaps = 26/312 (8%) Query: 6 TTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPT 65 LDLNLL + + +E+++T+AA ++++PSAVS +L +LRA +DPLFV + PT Sbjct: 9 DRLDLNLLKVFEAVYREQNLTRAANLLSLSPSAVSHALRRLRAHLNDPLFVKEGRIMRPT 68 Query: 66 PLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGLK--FELAAESPLMMIMLNALSKQIYQRY 123 P+ M +L + + LL P K F + + ++ ++I Q Sbjct: 69 PVCARMAPDLLDEIDRLRALLQSWGKFDPAQSKIVFTIGMPDAMEIVFFPEFVEKIRQLA 128 Query: 124 PQATIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCV 182 P I +D + + +++ +DI + + L +D Sbjct: 129 PNVRIISARYDRNEMVASLSGHTLDICVDIALPT----------SKQLRHHPLTADDW-C 177 Query: 183 WLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 + K H +L HI++ T D+ L++ G R + + + +L Sbjct: 178 IVSKTHTIQ----TAADYLAQEHIAVSARTVGTVLEDSALEQRGIFRDVRVRCQNYLSAL 233 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 + + D +L R Q Q L + +P + L WH N + Sbjct: 234 AIVERSDRIL-TMPKRLAQSMIQSRPLKIQDVPFSMP-------PIELNLYWHSDNEADS 285 Query: 303 KIVWLRETIKNL 314 WLRE + + Sbjct: 286 ANKWLREIVIDT 297 >UniRef50_A7K354 LysR substrate binding domain protein n=17 Tax=Gammaproteobacteria RepID=A7K354_VIBSE Length = 314 Score = 255 bits (653), Expect = 1e-66, Method: Composition-based stats. Identities = 65/317 (20%), Positives = 114/317 (35%), Gaps = 21/317 (6%) Query: 4 SITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLS 63 +DLNLL+ L + RSV+ AA++ V+ SA+S SL++LR FDDPLF + Sbjct: 14 QWRNIDLNLLVTFSYLYRYRSVSVAAEKSYVSQSAMSHSLSRLRLLFDDPLFERKGHKME 73 Query: 64 PTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKF--ELAAESPLMMIMLNALSKQIYQ 121 PT + + + L P + I L +I Q Sbjct: 74 PTEHAHHIAPTVHHLLDSIAKDLLTKSAFQPENYAGICRIGLTDYAEFIFAPRLYDEIRQ 133 Query: 122 RYPQATIKLRNWDYDSLDAI-TRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 R P+A I N + + A+ ++D+ + L + L+++ Sbjct: 134 RAPEAQISFINVNRSNYVALTEHEKLDVIIGS----------MPVLDDNFESLYLYTEKH 183 Query: 181 CVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQ 240 K +L+ F + + S +D L E G R + ++ F Sbjct: 184 VCMCDKQVLKGETQLSLEAFANIEQALVSPDGSLKTQVDQKLAEHGLSRKVTVASRNFLT 243 Query: 241 SLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 + + D + + + L V P+ + +LWH ++ Sbjct: 244 IRHLLKKRDLIAIV-PEKMALAEGFSDDLITVNPPIAV-------ADFDIAMLWHSSRNN 295 Query: 301 NPKIVWLRETIKNLYAS 317 K +WLRE + + S Sbjct: 296 EDKGIWLRELVSSTITS 312 >UniRef50_Q2SHJ0 Transcriptional regulator n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SHJ0_HAHCH Length = 291 Score = 255 bits (653), Expect = 1e-66, Method: Composition-based stats. Identities = 69/315 (21%), Positives = 134/315 (42%), Gaps = 30/315 (9%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 ++ +DLNLL+ L L+ ER VT+AAKR++++ A S +L + R F DPL + + Sbjct: 1 MNLRGVDLNLLVILDALLDERHVTRAAKRLHLSQPATSSALERCRHLFGDPLLIRGRGEM 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQ-TPRGLKFELAAESPLMMIMLNALSKQIYQ 121 + S+ + + + + ++++ + + +L L +++ Sbjct: 61 RLSAKAESLREPIKALLTQAERVINQADTPLAELRQTIRILMADFPVSALLGPLHQRLIT 120 Query: 122 RYPQATIKLRNWD--YDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 P + ++ W +L+ + +GE D+ S + ++ + L + Sbjct: 121 SAPNLDLIVQPWHGAKSALEQLAKGEADLAVS----------VFPNVGASFRCVELLYED 170 Query: 180 PCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFE 239 CV +RKDHPA Q +NL +L YPH+ + +D LQ G R + + +P F+ Sbjct: 171 YCVLMRKDHPAA-QNFNLQQWLAYPHVLVSGRGDADSPVDQTLQARGLRRRVGLVVPYFQ 229 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 + L+A P +C + + P+P + P L WH R Sbjct: 230 MAPD--------LIALLPTHC-VPQDTTKFTVFPPPIPVE-------GFPLHLAWHVRKH 273 Query: 300 HNPKIVWLRETIKNL 314 + + + E I+ + Sbjct: 274 GDQAVSHVVEVIREV 288 >UniRef50_B8ERS8 Transcriptional regulator, LysR family n=1 Tax=Methylocella silvestris BL2 RepID=B8ERS8_METSB Length = 323 Score = 255 bits (652), Expect = 2e-66, Method: Composition-based stats. Identities = 73/333 (21%), Positives = 137/333 (41%), Gaps = 39/333 (11%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 I T+DLNLL + +M+ RSV +A++ + VT SAVS +L++LR D LF++ G+ P Sbjct: 4 IRTIDLNLLRVFEAVMRHRSVIRASRELGVTASAVSHALSRLRQALGDELFISGEAGMEP 63 Query: 65 TPLMVSMEQNLAEWMQMSNLLLD-KPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRY 123 T + +E + + ++ + + +P T F +AA + + +L L ++ + Sbjct: 64 TARALELEPAIRDGLERIDHAVGAQPFVPTDAFRTFRIAATDYVAVAILPQLVGRLAEVA 123 Query: 124 PQATIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCV 182 PQ +++ ++ D + + G +D LP + + + + Sbjct: 124 PQIDLRIFPFNRTDVVRHLDEGRIDFVMG----------WFGDLPDRMRRATIVVEKEAM 173 Query: 183 WLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRER------------- 229 +R HP + +PHI + ++ A+D + G R Sbjct: 174 VVRTGHPLTEGPLTKERLFSFPHIVVELIGTEEAAVDGFFDDRGVWRRVWIERLLIEADA 233 Query: 230 ------TIAMSLPEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQ 283 +A+S+P + M D ++AT P LV L LP++ Sbjct: 234 DQGEVGRVAVSVPHYAAVPPMVRVSD--MVATLPSALARAAVEQG-SLVMLDLPYEP--- 287 Query: 284 KKLEVPFTLLWHKRNSHNPKIVWLRETIKNLYA 316 L VP ++WH+R + WL + + Sbjct: 288 --LAVPVEMVWHQRTERDEGSQWLLGELISAVK 318 >UniRef50_Q7MC61 Transcriptional regulator n=9 Tax=Gammaproteobacteria RepID=Q7MC61_VIBVY Length = 313 Score = 255 bits (652), Expect = 2e-66, Method: Composition-based stats. Identities = 67/316 (21%), Positives = 129/316 (40%), Gaps = 23/316 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +DLNLL ++M+ RSV +AA+ + +T AVS +L +LR + DPLF+ G++PT Sbjct: 15 MDLNLLKTFDVVMKTRSVNEAAETLGITAPAVSHALNRLRDQYQDPLFIRQGRGITPTNF 74 Query: 68 MVSMEQNLAEWMQMSNLLL--DKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQ 125 + + + E + + + + F L++ + +++L L + Q P Sbjct: 75 AIELHAEIQEPLSLLLNGAKSRQQFNPDTSHRTFRLSSHKDIDLMLLPPLMDHLAQHAPN 134 Query: 126 ATI--KLRNWDYDSLD-AITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCV 182 + + + D + +VD+ + E+LF + Sbjct: 135 VKLCADVEHLDERDRQADLRTRKVDMILATVPFDEH----------GYHNELLFELPLVM 184 Query: 183 WLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSL 242 R+DHP + T F H+ ++ + +D++ E +R IA ++ Sbjct: 185 VCRQDHPRIQNTITHQQFFAEQHLLWETKRQNQDIVDSLALEPQPQRNIAYKTGSSCNAI 244 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 MAAQ D + + T + + HQL ++ LP ++P + WH + Sbjct: 245 MMAAQTDWICV-TGQWHADLMAKAHQLQVMPLPFKL-------NKLPIYMTWHHSQQQDS 296 Query: 303 KIVWLRETIKNLYASM 318 WL+ + A+ Sbjct: 297 GHQWLKSALMQATATF 312 >UniRef50_B1MJW3 Putative transcriptional regulator, LysR family n=1 Tax=Mycobacterium abscessus ATCC 19977 RepID=B1MJW3_MYCA9 Length = 295 Score = 254 bits (651), Expect = 2e-66, Method: Composition-based stats. Identities = 74/313 (23%), Positives = 121/313 (38%), Gaps = 22/313 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +DLNLL L L+QE SVT AA+R+ +P AVS+SL +LR D L V + GL PTP Sbjct: 1 MDLNLLRVLDALLQENSVTAAAERLATSPPAVSRSLGRLRRITGDALLVRAGQGLVPTPR 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTP--RGLKFELAAESPLMMIMLNALSKQIYQRYPQ 125 V + L ++ ++ +L P F + A + + L +++ P Sbjct: 61 AVQIRDELGGLLRRADQILRPGAEFDPGKLQRTFIVQAAELFLTALAVPLLERLRHDAPG 120 Query: 126 ATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + + A+ RG++DI L L + + Sbjct: 121 VNVVFAPEAREDTGALRRGDIDIELGS----------LDHLDPETRHTPVAMLPMVGVAA 170 Query: 186 KDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMA 245 +DHP + TF Y HIS+ +D L G R + + +P ++ +A Sbjct: 171 QDHPLFEGPIDAGTFATYGHISVSRRGKLYGPIDEALARHGLRRRVPVVVPSHTSAMLLA 230 Query: 246 AQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIV 305 + L A L + +P + V + WH RN+ + Sbjct: 231 RSSRLIALTVAGSV-----DTAGLGIRMFDIPLELP-----AVAVGVAWHPRNNDDAAHT 280 Query: 306 WLRETIKNLYASM 318 WLR + +A + Sbjct: 281 WLRGLLIESFARL 293 >UniRef50_D0RZK6 Transcriptional regulator n=1 Tax=Acinetobacter calcoaceticus RUH2202 RepID=D0RZK6_ACICA Length = 303 Score = 254 bits (651), Expect = 2e-66, Method: Composition-based stats. Identities = 73/318 (22%), Positives = 133/318 (41%), Gaps = 21/318 (6%) Query: 1 MKKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPL 60 M DLNLLL L Q ++V KAA+ + ++PSA S +L +LR DPLFV Sbjct: 4 MHGLPHGFDLNLLLVFNALYQHKNVAKAAETLFISPSAFSHALNRLRDTLQDPLFVRMNG 63 Query: 61 GLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQT--PRGLKFELAAESPLMMIMLNALSKQ 118 + PT + +++ + + L K +F +AA ++ L K Sbjct: 64 EMKPTKKSEEIAPSISNCLSTLSQNLFKNSDFDYATSDYEFVIAATEYTAFSVMPLLVKH 123 Query: 119 IYQRYPQATIKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFS 177 + P IK+ + + S+D + G++D E S P ++ F+ Sbjct: 124 LRTIAPNIKIKIISENKQCSIDELMLGKIDFVIGYSELSEGS-------PNHLEVFQCFA 176 Query: 178 DVPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPE 237 D V K+ ++Q+ NL++F+ HI + +D L+++G R I + +P Sbjct: 177 DRYVVIAPKN---IYQSMNLESFISAQHIRVSSWNEHYGVIDQSLKKMGIRRQICVEVPH 233 Query: 238 FEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKR 297 + +M Q L++ + + H++ + LP E Q V ++ Sbjct: 234 VMLAPYMM-QSAELIVTLPLKAVDAIKKNHEIDIFELPFSVPEYQVNVYSV-------EK 285 Query: 298 NSHNPKIVWLRETIKNLY 315 + +WL + I +L+ Sbjct: 286 SKLKACQIWLVDEILSLF 303 >UniRef50_B9J825 Nod transcriptional regulator protein n=1 Tax=Agrobacterium radiobacter K84 RepID=B9J825_AGRRK Length = 333 Score = 254 bits (651), Expect = 2e-66, Method: Composition-based stats. Identities = 71/322 (22%), Positives = 122/322 (37%), Gaps = 25/322 (7%) Query: 1 MKKS--ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNS 58 M + +DLNLLL +LMQER+V++AA+R+ + +S +L +LR DD LFV Sbjct: 3 MMNDAALRKIDLNLLLAFSVLMQERNVSRAAERLLLGQPGLSAALRRLRETLDDELFVRV 62 Query: 59 PLGLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPR--GLKFELAAESPLMMIMLNALS 116 GL PT +S+ + + + + P P +F + L L+ Sbjct: 63 GRGLQPTARALSIAPAIEDALSGIERAIRPPAAFDPSSWQGEFRVGMCDNLESDFFGPLA 122 Query: 117 KQIYQRYPQATIKLRNWD-YDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVL 175 ++ P A + +D ++ + G D S + L Sbjct: 123 ARLRGLAPNARLTGVAFDKREAGRLLDEGAYDFSISVHDEPAS----------WHIRAPL 172 Query: 176 FSDVPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSL 235 F+ H L L+ F + HI++ E + +D L +G R + ++ Sbjct: 173 FNQASACIYDPRHIRLDAPLGLEDFAKADHITVSLEGNTLTNVDLALARVGYHRQVVATV 232 Query: 236 PEFEQSLFMAAQPDNLLLATAP-RYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLW 294 P + +AT P + QLH L + PL P T+L+ Sbjct: 233 PRYSALPMALRA--MPAIATIPESIARCMAQLHNLTVSQPPLDLPAD-------PVTMLY 283 Query: 295 HKRNSHNPKIVWLRETIKNLYA 316 + + + + VW R + A Sbjct: 284 RRVDQADSRAVWFRRLFVEVVA 305 >UniRef50_B1K4K0 Transcriptional regulator, LysR family n=3 Tax=Burkholderia cenocepacia RepID=B1K4K0_BURCC Length = 301 Score = 254 bits (651), Expect = 2e-66, Method: Composition-based stats. Identities = 72/311 (23%), Positives = 130/311 (41%), Gaps = 23/311 (7%) Query: 9 DLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLM 68 DLNLL +L+ ERSV KAAKR++++ SA+S++L+++R F DP+ + + L PTP Sbjct: 10 DLNLLKAFSVLVAERSVVKAAKRLHLSESAMSRTLSRVRDAFGDPILIRAGRSLIPTPRA 69 Query: 69 VSMEQNLAEWMQMSNLLLDKPHHQTPR--GLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 +S+ + + + M+ +L + P F + L + P Sbjct: 70 LSLHPRVLDMLAMAQDILTRAELVDPASLTQTFTIRCNEGFATEFGAKLLDIVTTAAPGV 129 Query: 127 TIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRK 186 ++ D A+ + DI +L I + L D + Sbjct: 130 HLRFAMQDEKDATALREDKADIEVG----------VLGKSGPEIRVQTLLRDRFVGVVAM 179 Query: 187 DHPALH-QTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMA 245 HP ++D + RYPH+S+ +D +L LG +R +A ++ F +L +A Sbjct: 180 SHPLAGHDPVSIDAYTRYPHVSVSRRGRRDGPIDALLSALGAKRRVATTVSSFPVALALA 239 Query: 246 AQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIV 305 ++A P Q + + LP+ + V +++WH + +P Sbjct: 240 QG--GSIVANVPFR-QTASGRIGMHTFELPV-------QTEPVVVSMMWHPKVDPDPAHR 289 Query: 306 WLRETIKNLYA 316 WLR+ + A Sbjct: 290 WLRDCLLQTCA 300 >UniRef50_Q7MQI2 Transcriptional regulator n=36 Tax=Gammaproteobacteria RepID=Q7MQI2_VIBVY Length = 321 Score = 254 bits (651), Expect = 3e-66, Method: Composition-based stats. Identities = 77/313 (24%), Positives = 128/313 (40%), Gaps = 23/313 (7%) Query: 9 DLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLM 68 DLNLL+ L++L++E SV+KAA R+N++ SA+S+ L +LR DPLF L PT Sbjct: 18 DLNLLVALRVLIEESSVSKAAVRLNLSQSAMSRVLGRLRDLLGDPLFTREGQHLLPTEKA 77 Query: 69 VSMEQNLAEWMQMSNLLLDKPHHQTPR--GLKFELAAESPLMMIMLNALSKQIYQRYPQA 126 + +++ L E ++ LL P F +A M +L +IYQ P Sbjct: 78 LEIDRALGEPLESLRQLLSPS-EFDPHLCTQTFTIATTDYAMQTILPFALPRIYQEAPNV 136 Query: 127 TIKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + +D L D +T D+ + EVL L Sbjct: 137 SFHFLPLQHDRLADQLTYEGADLAICRPTGPVEP----------LRSEVLGRVGVLCLLS 186 Query: 186 KDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMA 245 K HP + +L +L YPH I ++ L + +R + + E +L + Sbjct: 187 KQHPLAGKEMSLADYLYYPHAMIAISDGVKALIEQALVDQ-PQRKMVLRAYHLEAALAIV 245 Query: 246 AQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIV 305 L++ + + L + ALP F ++++WH R H+P Sbjct: 246 -DTMPLIITVPADLAYLVAERYDLVVKALPFQF-------TPFDYSMIWHPRCEHSPAQE 297 Query: 306 WLRETIKNLYASM 318 WLR ++ + + Sbjct: 298 WLRSVVREECSRL 310 >UniRef50_B9Z947 Transcriptional regulator, LysR family n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z947_9NEIS Length = 330 Score = 254 bits (650), Expect = 3e-66, Method: Composition-based stats. Identities = 73/319 (22%), Positives = 127/319 (39%), Gaps = 23/319 (7%) Query: 2 KKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLG 61 ++ LDLNLL+ LMQER V++AA R+ + A+S +LA+LR DDPLFV S Sbjct: 8 HDALRRLDLNLLVAFDALMQERHVSRAAARLFLGQPAMSHALARLRQLLDDPLFVRSGSR 67 Query: 62 LSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQI 119 + PTP + + W++ + L + P F LAA + ++ AL + Sbjct: 68 MEPTPRACELAPQVRAWLEQAQQFLFRADAFDPAAAHATFRLAAPDGMEALLYPALIATL 127 Query: 120 YQRYPQATIKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSD 178 + P ++ + + D L A+ EVD+ + R LF Sbjct: 128 RRDAPGVRLRSQLLETDQQLAALDHDEVDLLITAAPLALR---------DWHSRLRLFKS 178 Query: 179 VPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEF 238 + L + L H+ + + +D++ G ER + + Sbjct: 179 DFISVHSRRQLPLPEPATLADLASCDHVVSSYRGTAAGVVDHLFAAHGLERRVQVLSASL 238 Query: 239 EQSLFMAAQPDNLLLATAPRYCQ-YYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKR 297 + AQ L++ P + ++ +L LP + + L+WH+R Sbjct: 239 LAIGHIVAQ--APLMSIQPAIYRGLFSTTPELACAPLP--------GEARITVGLVWHRR 288 Query: 298 NSHNPKIVWLRETIKNLYA 316 N +P +LR+T+ Sbjct: 289 NDRHPLHRYLRDTVIAAMR 307 >UniRef50_B5ZVD7 Transcriptional regulator, LysR family n=4 Tax=Rhizobium RepID=B5ZVD7_RHILW Length = 321 Score = 254 bits (650), Expect = 3e-66, Method: Composition-based stats. Identities = 68/324 (20%), Positives = 123/324 (37%), Gaps = 26/324 (8%) Query: 1 MKKS---ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVN 57 M + + +DLNLLL +LMQER+V++AA R+ + +S +L +LR DD LFV Sbjct: 1 MMMNDATLRKIDLNLLLAFSVLMQERNVSRAADRLLLGQPGLSAALRRLRETLDDELFVR 60 Query: 58 SPLGLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPR--GLKFELAAESPLMMIMLNAL 115 GL PTP +S+ + + + + P +F + L L Sbjct: 61 VGRGLQPTPRALSIAPAIEDALSGIERAIRPQADFDPASWQGEFRIGMCDNLESAFFGPL 120 Query: 116 SKQIYQRYPQATIK-LRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEV 174 ++ Q P A + + + D+ + G D S + Sbjct: 121 VARLLQLSPGARLIGIASEKRDAARRLDEGVFDFSVSVHDEPAS----------WHIRAP 170 Query: 175 LFSDVPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMS 234 LF+ + L +L+ F H+++ +E + + ++D L G R + + Sbjct: 171 LFNQASICIYDEAQLKLKAPLSLEDFANVAHVTVSFEGNASTSIDTALSRTGHVRRVVAT 230 Query: 235 LPEFEQSLFMAAQPDNLLLATAP-RYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLL 293 +P F ++ P + QLH L + A PL P T+L Sbjct: 231 VPRFSALPTALRA--MPAISVVPESIGRCMAQLHGLTICAPPLSLPAD-------PVTML 281 Query: 294 WHKRNSHNPKIVWLRETIKNLYAS 317 + + + + + W R ++ Sbjct: 282 YRRVDQADGRARWFRRLFLDVADE 305 >UniRef50_A5VBV3 Transcriptional regulator, LysR family n=1 Tax=Sphingomonas wittichii RW1 RepID=A5VBV3_SPHWW Length = 319 Score = 254 bits (649), Expect = 3e-66, Method: Composition-based stats. Identities = 71/319 (22%), Positives = 125/319 (39%), Gaps = 13/319 (4%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 ++ DLNLL L +L+ ER+VT+AA+R+ VT A S +L +LR FDD L L Sbjct: 1 MQLSHFDLNLLRALDILLTERNVTRAAERLCVTQQAASSALQRLRHHFDDELLTRVGRHL 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKF--ELAAESPLMMIMLNALSKQIY 120 TPL S+ + E + LD H P ++ +A + ++L L + + Sbjct: 61 ELTPLARSLIMPVREALLTVQAALDARPHFDPATARYKCRIAMSDYCLHVILPHLLRYLT 120 Query: 121 QRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 P + S D + GE+D + + I LF D Sbjct: 121 ITAPNMQCAVETLGPASFDRLEMGELDFCLTAHDMRLYGTH---RPSRHIRTMPLFRDDF 177 Query: 181 CVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQ 240 H + +L T+ R H ++ + + +++ E IA+ +P F Sbjct: 178 VCVADPAHVDIADGMSLRTYRRARHNTVDFGEDLKTIVEDAWASSSTEFDIAVLVPNFAA 237 Query: 241 SLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 +FM L+ + R L + P+ + Q+ L WH+R+ Sbjct: 238 QIFMLPGT-PLVATSQRRLANTLAPRLGLAVAECPMKLPQLQEI-------LFWHERSEQ 289 Query: 301 NPKIVWLRETIKNLYASMA 319 +P +++R+ + + Sbjct: 290 DPARIFVRKAFGLMVDQLG 308 >UniRef50_A0NZC9 LysR family regulatory protein n=3 Tax=Rhodobacteraceae RepID=A0NZC9_9RHOB Length = 305 Score = 254 bits (649), Expect = 4e-66, Method: Composition-based stats. Identities = 74/317 (23%), Positives = 135/317 (42%), Gaps = 20/317 (6%) Query: 4 SITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLS 63 ++ + DLNLL+ + +MQ S++ AA I ++PSAVS +LA+LR +D LF + G+S Sbjct: 3 NLRSFDLNLLVIFRAIMQRGSISGAANEIGLSPSAVSHALARLRVMLNDELFFRTAEGVS 62 Query: 64 PTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQIYQ 121 PT + ++ + + + H P F + + +L L+K++ Sbjct: 63 PTERARELSVDIERGLSFISTAISLQHQFVPAETNRVFTMQVADYVAGFLLPRLAKRLQS 122 Query: 122 RYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPC 181 P TI + + VD+ P + + L +D Sbjct: 123 EAPGITIDILPFSISPESVWD--RVDM--------QVRLTPGRLQPEMVRSQRLLADEIV 172 Query: 182 VWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQS 241 V +R+ HP + + + + PH+ + + T +++ L G +R +AM++ + + Sbjct: 173 VLMRRGHPRVDEPMTAELYAELPHVKLSQSATGTTVIEDALAARGLKRHMAMTVASWFEI 232 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 + A+ D L+A AP+ + L + PLP DE F L W R Sbjct: 233 PDIVARSD--LIAIAPQRLLSLDPRLG-KLHSAPLPLDEVV-----FSFDLCWDLRKERE 284 Query: 302 PKIVWLRETIKNLYASM 318 P WLR+ I ++ + Sbjct: 285 PGQKWLRQLIVEMFEEV 301 >UniRef50_A5F3E5 Transcriptional regulator, LysR family n=29 Tax=Vibrio RepID=A5F3E5_VIBC3 Length = 308 Score = 254 bits (649), Expect = 4e-66, Method: Composition-based stats. Identities = 72/320 (22%), Positives = 136/320 (42%), Gaps = 24/320 (7%) Query: 1 MKKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPL 60 M + DLNLL +M+ SV+KAA ++ +T +AVS++L++LR DPLF+ Sbjct: 1 MIM-LRDYDLNLLTVFDSVMKLGSVSKAADKLGMTSAAVSQNLSRLREQVGDPLFIRQGR 59 Query: 61 GLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQ 118 GL PT ++M +++AE + L+ P +F + + +++L L ++ Sbjct: 60 GLQPTQYALNMHKHVAEGLSAIRFGLETDAGFDPATSKREFIIGGQGYFDLVVLPPLLQK 119 Query: 119 IYQRYPQATIKLRNWDYDSL---DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVL 175 I P T+ L++++ D ++ E D+ + L +I + Sbjct: 120 ISDIAPHITVNLKSYEDDHFTPSQVLSEREADLFLAA----------LPISHPSIVTTQV 169 Query: 176 FSDVPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSL 235 + V K+HP L T + + F H ++ + + +++ ++ R + Sbjct: 170 AEEALVVVYAKNHPRLGSTLSFEQFFAEKHTALTSRRFGNYLFSSLVDQVLPARRVHYQS 229 Query: 236 PEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWH 295 + A+ D LL T R + + L + LP VP + WH Sbjct: 230 ESMLNLMATASVTD-LLCFTPKRLADMWAEKLGLQIQPLPFEI-------RSVPTFMCWH 281 Query: 296 KRNSHNPKIVWLRETIKNLY 315 K + ++WLRE I+ + Sbjct: 282 KAKQQDKGLIWLREQIEAIL 301 >UniRef50_B9K150 Transcriptional regulator LysR family n=1 Tax=Agrobacterium vitis S4 RepID=B9K150_AGRVS Length = 318 Score = 254 bits (649), Expect = 4e-66, Method: Composition-based stats. Identities = 59/318 (18%), Positives = 108/318 (33%), Gaps = 20/318 (6%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 LDLNLL+ L L++ R+V++AA+ + +T SA+S +L +LR +FDDPL + + Sbjct: 1 MRFKNLDLNLLVALDTLIRVRNVSRAAEEMFITQSAMSNALGRLRDYFDDPLLIQVGRSM 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTP--RGLKFELAAESPLMMIMLNALSKQIY 120 +PL S+E L + + + P L + ++ +Q+ Sbjct: 61 ELSPLAASLELPLRDIIVRIEAAVVSTPSFIPHESTRSINLIVSDYTLNTIMPPFLRQVT 120 Query: 121 QRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 P I + + RGE D+ + + E D Sbjct: 121 ALAPGVQIHFQPQQNYPHLLLERGEADLLVAPSDFC----------STNHPSEPFLEDQI 170 Query: 181 CVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQ 240 C + + P FL H+ + LG + + S F Sbjct: 171 CCVVDVNGPLAEGPMTEKDFLEAGHVVMQPPNGGETFAQRACDRLGLKIKVEASTFSFSS 230 Query: 241 SLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 F+ + + + L + ++ + L WH + Sbjct: 231 LPFLIRGSKRIAMV-QRSLAECMLNLGGIRIMD-------PPFPLPPLLQCLQWHSYRTR 282 Query: 301 NPKIVWLRETIKNLYASM 318 +P +VW R + A + Sbjct: 283 DPALVWFRSQMHEAAARV 300 >UniRef50_B5JUQ0 Transcriptional regulator, LysR family, putative n=1 Tax=gamma proteobacterium HTCC5015 RepID=B5JUQ0_9GAMM Length = 300 Score = 253 bits (648), Expect = 5e-66, Method: Composition-based stats. Identities = 60/317 (18%), Positives = 123/317 (38%), Gaps = 21/317 (6%) Query: 1 MKKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPL 60 MK ++ ++DLNL + +M++ S+ AA + ++ A S +L +LR D LFV + Sbjct: 1 MKLNLRSVDLNLFPVFEAIMEQGSLNMAACHLGMSQPAASAALKRLRLTIKDELFVRTRR 60 Query: 61 GLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTP--RGLKFELAAESPLMMIMLNALSKQ 118 GL PT + + + ++ +++ + P F++A M+ + L Sbjct: 61 GLEPTARALELYPVVHHLLESLRGEMERANQFDPLFCERIFKVAGGDYFDMVFMGRLMNM 120 Query: 119 IYQRYPQATIK-LRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFS 177 + + P+ ++ + + +SL+ I RG++D+ + L LF Sbjct: 121 LRESAPKVQVESVIHGFQESLNLIQRGKLDLCLHYDKEIAHELPTL----------KLFE 170 Query: 178 DVPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPE 237 + V + DHP + +L ++ H+ + + LD +L R + + Sbjct: 171 ESMSVLMAADHPYADKQLSLSDYIALEHVVLPKLSGNANQLDVILGGFNENRCVRARVSS 230 Query: 238 FEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKR 297 + Q L+ R + + L P ++ +P L W Sbjct: 231 VSSMVMAIKQS-YLIGTIPTRMASILCEGYDLVFKPFP-------KEAPPIPIYLSWAPF 282 Query: 298 NSHNPKIVWLRETIKNL 314 + + W R I +L Sbjct: 283 SDKDSVHRWFRNMIASL 299 >UniRef50_B7VJC4 Putative LysR-like regular protein n=4 Tax=Vibrionales RepID=B7VJC4_VIBSL Length = 308 Score = 253 bits (648), Expect = 5e-66, Method: Composition-based stats. Identities = 68/318 (21%), Positives = 120/318 (37%), Gaps = 20/318 (6%) Query: 4 SITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLS 63 + +DLNLL+ LQ L + SV+KAA+R V+ SA+S SL +LR FDDPLF + Sbjct: 5 NWKGIDLNLLIALQALYKTNSVSKAAERCYVSQSAMSHSLQRLRKLFDDPLFERVGSKME 64 Query: 64 PTPLMVSMEQNLAEWMQMSNL--LLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQ 121 T + + + + LL K +++ + AL I Q Sbjct: 65 ATDRAIELSSTVEALLNTIQSEVLLSKSFDAATYKGTWKIGLTDYAEQMFAPALFDLIKQ 124 Query: 122 RYPQATIKLRNWDYDSLDAI-TRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 P + + L N + + + ++D+ + L+++ Sbjct: 125 SSPNSQVVLFNVNRSNYQQVFEDAKLDMAIGS----------FGEVSKQYRTTHLYTEQH 174 Query: 181 CVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQ 240 K ++ +L+ F+ H + S +D L ELG R +A+ F Sbjct: 175 VCLFDKSVVSIEGPISLEQFVAVEHALVSPAGSLKTGVDKRLAELGFSRKVAICSSNFLT 234 Query: 241 SLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 + + LL P+ + Q +VA+ P D + L++ K Sbjct: 235 VKRLIRGRE--LLCIVPKLVARNDIQDQDTVVAVEPPIDVP-----DFDIQLIYRKTKHL 287 Query: 301 NPKIVWLRETIKNLYASM 318 + K LR+ +S+ Sbjct: 288 DDKNKLLRKLFTQAVSSV 305 >UniRef50_A6W028 Transcriptional regulator, LysR family n=1 Tax=Marinomonas sp. MWYL1 RepID=A6W028_MARMS Length = 309 Score = 253 bits (648), Expect = 5e-66, Method: Composition-based stats. Identities = 55/317 (17%), Positives = 125/317 (39%), Gaps = 22/317 (6%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 LDLNLL+ L L+ E+S+TK A+++N++PSA+S SL++LR +F+D L + Sbjct: 1 MRFKKLDLNLLVALDTLLTEQSITKGAEKLNMSPSALSNSLSRLRDYFEDDLLTQIGRRM 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNL--LLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIY 120 TPL +++ ++ + L+ F + +++ + + Sbjct: 61 VITPLGENLKVSVRNALNNIESTILVQPSFEPQTTDRIFSIFCSDYTQTVLVPHALEIVG 120 Query: 121 QRYPQATIKLR-NWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 ++ A +L + + + +G+ D+ + + ++L+ + Sbjct: 121 KQKSTARFQLLAQVANNPHEQLEQGKADLLIIPSDF----------MSTEHPCDILYEEE 170 Query: 180 PCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVL-QELGRERTIAMSLPEF 238 + K + + H+ + E + + Q+ G +R + + F Sbjct: 171 FVCVVWKHSKIASGELTAEKYAAAGHVLMRPEATKKDFFGTLFTQKYGIKRHVIATTFSF 230 Query: 239 EQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRN 298 + +N+ R ++ L ++ LP +Q + WH+ Sbjct: 231 ASLPALVIGSENIA-TIHARLATKMAKVWPLKILPLPFDIPPMKQ-------CVQWHQYR 282 Query: 299 SHNPKIVWLRETIKNLY 315 +++ ++WLR T+K Sbjct: 283 NNDEGLIWLRNTLKEAA 299 >UniRef50_A1UYG7 Transcriptional regulator, LysR family n=45 Tax=Burkholderia RepID=A1UYG7_BURMS Length = 439 Score = 253 bits (648), Expect = 5e-66, Method: Composition-based stats. Identities = 67/320 (20%), Positives = 114/320 (35%), Gaps = 23/320 (7%) Query: 1 MKKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPL 60 M+ LDLNL L + + ++ AA+ +++T AV+ +L +LRA F DPLFV Sbjct: 132 MQPD-HRLDLNLFRVLDAVYVQGGISAAARALHLTQPAVTHALNRLRAHFGDPLFVRQGN 190 Query: 61 GLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTP--RGLKFELAAESPLMMIMLNALSKQ 118 + PT + ++ ++ +P + F + L I L L + Sbjct: 191 KVVPTERTREVIADVQRHLKGLQDAARAQTRFSPGALDMSFVVGVRDVLESIALPQLVET 250 Query: 119 IYQRYPQATIKLRNWD-YDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFS 177 + + P + R D + G +D+ E I E + Sbjct: 251 LAREAPGVRLVSRRVPVADIGRELGSGNLDLAI----------ERRVPAGPRIVAEHVAD 300 Query: 178 DVPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPE 237 D V +R+DH + H+++ LD +L GR R I + Sbjct: 301 DTLVVAMRRDHALAGAPLRRADYFAAGHVTVSPLGEPHT-LDVLLGADGRFRRIQLVCQH 359 Query: 238 FEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKR 297 + + + A D LLL Y +L L LPL P WH+ Sbjct: 360 YFAACQIVASGD-LLLTLPRSYALRMTRLLPLAAQPLPLRL-------KPYPILAYWHES 411 Query: 298 NSHNPKIVWLRETIKNLYAS 317 + W R+ + + + Sbjct: 412 RELDRAHQWFRQRVIEVVRA 431 >UniRef50_UPI0001B54141 LysR family transcriptional regulator n=1 Tax=Streptomyces sp. C RepID=UPI0001B54141 Length = 298 Score = 253 bits (647), Expect = 6e-66, Method: Composition-based stats. Identities = 81/310 (26%), Positives = 130/310 (41%), Gaps = 20/310 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +DLNLL L L+QE SVT+AA+R+ +P+AVS++LA+LR DPL V + GL PTP Sbjct: 1 MDLNLLRVLDALLQENSVTRAAERLGTSPAAVSRTLARLRRTVGDPLLVRAGQGLVPTPR 60 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTP--RGLKFELAAESPLMMIMLNALSKQIYQRYPQ 125 V + + + ++ + +L F + A L++ + +L+++I+ PQ Sbjct: 61 AVELREEVGALIRGCDNVLRPGAGFDAVHLQRTFTVQATDLLLVGLAGSLTERIHAEAPQ 120 Query: 126 ATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + + + +G VD+ +L L I L R Sbjct: 121 VDVVFLPEAVEGGPGLRQGLVDVELG----------VLGHLDPEIRTRRLTRMPLVGIAR 170 Query: 186 KDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMA 245 HP + F HI I +D+ L ELG R A+ +P ++ +A Sbjct: 171 TGHPLFDGRIDARRFAAADHIGISRLGKRLGPIDSALAELGLRRRTAVVVPSHTSAMMLA 230 Query: 246 AQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIV 305 D + L+ A + L A P+P D + + WH RNS +P Sbjct: 231 RDTDLVALSLADWIPDTIAAM---GLRAFPVPLDL-----EPLDLGMAWHPRNSADPGHR 282 Query: 306 WLRETIKNLY 315 W RE + Sbjct: 283 WFREHLAAAV 292 >UniRef50_B2T3Y4 Transcriptional regulator, LysR family n=3 Tax=Burkholderiales RepID=B2T3Y4_BURPP Length = 321 Score = 253 bits (647), Expect = 7e-66, Method: Composition-based stats. Identities = 69/313 (22%), Positives = 122/313 (38%), Gaps = 23/313 (7%) Query: 9 DLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLM 68 DLNLL L L+ E++VT+AA+ ++++ SA+S++L +LRA DPL V + + TP Sbjct: 24 DLNLLFALDALLTEKNVTRAARSLHLSASAMSRTLTRLRAATGDPLLVRAGRNMVLTPHA 83 Query: 69 VSMEQNLAEWMQMSNLLL---DKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQ 125 + + + + LLL + + A + L ++ P Sbjct: 84 EEIREQTHNIVLEARLLLCPSSAAADFSTLSRTLRIRANEAFVEAFGAPLIAEVTAVAPL 143 Query: 126 ATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLR 185 + + S + + G D+ +L + I LF D +R Sbjct: 144 VRLHFSSKAEKSAEYLRNGSADLEIG----------VLEEMGPEIRVRALFRDRYVGVVR 193 Query: 186 KDHPALHQT-WNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 K HP + + + + H+ + ALD + G ERT +P F +L + Sbjct: 194 KGHPLETEQDVTIARYAAFGHVVAPHGRQIIDALDAAIALQGLERTTVAVVPSFPAALAV 253 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 A D L+A P Q L LP+ + + +WH R ++P Sbjct: 254 AQASD--LVALLPASFANAQQSESLHSFELPVA-------TEGLTISQMWHPRLENDPVH 304 Query: 305 VWLRETIKNLYAS 317 W R+ + ++ Sbjct: 305 RWFRQLVLDVCRR 317 >UniRef50_Q7MCZ8 Transcriptional regulator n=13 Tax=Vibrionaceae RepID=Q7MCZ8_VIBVY Length = 313 Score = 253 bits (647), Expect = 7e-66, Method: Composition-based stats. Identities = 71/297 (23%), Positives = 133/297 (44%), Gaps = 20/297 (6%) Query: 21 QERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSMEQNLAEWMQ 80 +E V++AA R+++T SA+S+ LA+LR DPL V L TP ++ L + + Sbjct: 18 EECHVSRAADRLHITQSAMSRQLAQLRELCSDPLLVREGNRLVATPHAEALRPKLVQLLS 77 Query: 81 MSNLLLD-KPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQATIKLRNWDYDSLD 139 L D + + + L++ + ++ LS+ + ++ P+ T+ R W LD Sbjct: 78 EFEHLFDHQAFNPQDWQGQLVLSSSDYVAQFIVPTLSRVLIEQAPRLTLSYRLWQPQYLD 137 Query: 140 AITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPALHQ-TWNLD 198 ++ + + +L S P + Y + D +R+ HP + +L+ Sbjct: 138 SLLDTGIHLA----------STMLPSPPKELSYTKIGEDYSVCVMRQGHPLSGKAALSLE 187 Query: 199 TFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQPDNLLLATAPR 258 LRY HI + A D+VL++LG+ R IA+ +P F ++ + Q D +++ Sbjct: 188 DMLRYSHIKVTGGGDKDSATDSVLRKLGKTRHIALQVPFFSAAVNVLIQSDYMMVV-PEH 246 Query: 259 YCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWLRETIKNLY 315 + + PLPFD + + L+WH + H+ W+RE + + Sbjct: 247 IAVNLAKSQP--ICHYPLPFDTEIHQ-----YWLMWHPKYDHDSAHRWVREKVTRVM 296 >UniRef50_Q5ZSZ0 Transcriptional regulator, LysR family n=4 Tax=Legionella RepID=Q5ZSZ0_LEGPH Length = 305 Score = 253 bits (646), Expect = 8e-66, Method: Composition-based stats. Identities = 63/319 (19%), Positives = 136/319 (42%), Gaps = 26/319 (8%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVN-SPLGLS 63 + L+LNLL L L+ R +T A+K++ ++ S++S L +LR F D L V + Sbjct: 1 MDKLNLNLLRALYALLTCRHLTLASKKMGISQSSMSIYLKQLREHFHDDLLVRGQGNIMQ 60 Query: 64 PTPLMVSMEQNLAEWMQMSNLLLDKPHHQTP--RGLKFELAAESPLMMIMLNALSKQIYQ 121 TPL S+ + + + L + P F + + +++ +L K++ Q Sbjct: 61 LTPLANSLIGKARQALSLIETLFNTIETFNPLISERSFSIGMTDLMSILLTPSLIKRLEQ 120 Query: 122 RYPQATIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 P + +++ Y ++++ G++D+ + +P + + LF D Sbjct: 121 EAPGVKLNIKHPSYLNTVEVFESGDIDLMIG----------MFERVPEGLKQQKLFQDEA 170 Query: 181 CVWLRKDHPAL-HQTWNLDTFLRYPHISICWEQS-DTWALDNVLQELGRERTIAMSLPEF 238 + +HP + ++ +YP I ++ D L++LG ++ +++SL + Sbjct: 171 VIVGGNNHPGIQKGKICIEELFKYPLIQFSLRETPFYNYFDRYLRQLGHDKRVSISLGQ- 229 Query: 239 EQSLFMAAQPD-NLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKR 297 + + D + L + + + + L L + ++P D WH++ Sbjct: 230 -GIMPLLVLTDSHYLTLSIRKVAEKLSHLIPLSIASVPFEVD-------SFNCYQYWHQK 281 Query: 298 NSHNPKIVWLRETIKNLYA 316 + +P WLRE I ++ Sbjct: 282 DDADPGHRWLREMILSIAK 300 >UniRef50_Q471I4 Regulatory protein, LysR:LysR, substrate-binding n=1 Tax=Ralstonia eutropha JMP134 RepID=Q471I4_RALEJ Length = 323 Score = 253 bits (646), Expect = 9e-66, Method: Composition-based stats. Identities = 79/315 (25%), Positives = 128/315 (40%), Gaps = 23/315 (7%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 L LN LL L +L+ ERS+TKAA+ +N+T A+SK+LA+LR +F DPLFV L + PTP Sbjct: 12 LSLNQLLVLDVLLSERSLTKAARVLNLTQPALSKTLARLRQYFGDPLFVRVGLRMEPTPK 71 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTP--RGLKFELAAESPLMMIMLNALSKQIYQRYPQ 125 + + + +Q L P F ML L ++ + P Sbjct: 72 ALELADPVRGILQSVRALRSDHVGFDPRTSQRSFSFFLLDAGASQMLPPLLSRLAEEAPG 131 Query: 126 ATIKLRNWDYDSLD-AITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 ++ N D LD + G VD+ L +I ++L+ + + Sbjct: 132 ILVQAVNADATHLDIWLENGLVDLAIGS----------FPGLTQSIRRQLLWHETYGAVV 181 Query: 185 RKDHPALHQTWNLDTFLRYPHISICWEQSDTWA--LDNVLQELGRERTIAMSLPEFEQSL 242 RKDHP L Q +LD F+ H+ + + ++ ++ I +P F + Sbjct: 182 RKDHPRLAQLGDLDAFVAEKHVLVSAVGTGHQHLSIERAIEAAVPHTNIICRVPSFATAG 241 Query: 243 FMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNP 302 +A D + + + + L +V PL + WH R P Sbjct: 242 LIAKHSDAVAVLPL-TLARALCKDLDLTVVMPPLTLP-------GMDIAQHWHDRVHREP 293 Query: 303 KIVWLRETIKNLYAS 317 W+R + L+A Sbjct: 294 GNQWIRALVHRLFAR 308 >UniRef50_A5VCH0 Transcriptional regulator, LysR family n=1 Tax=Sphingomonas wittichii RW1 RepID=A5VCH0_SPHWW Length = 327 Score = 253 bits (646), Expect = 9e-66, Method: Composition-based stats. Identities = 77/336 (22%), Positives = 137/336 (40%), Gaps = 42/336 (12%) Query: 4 SITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLS 63 +LDLNLL L +E SVT AA + +TPSAVS SL +LR D LF+ G++ Sbjct: 5 HFRSLDLNLLRVFDALTEEGSVTGAAGLLGLTPSAVSHSLNRLRHILKDDLFLRGAKGMN 64 Query: 64 PTPLMVSMEQNLAEWMQMSNLLLD-KPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQR 122 PTP +++ + + L+ +F +A + +++ + + + Sbjct: 65 PTPKALALAVPIRRALVDIQQALNGDSFVPEKTDRRFSIACGDYVTAVLMPEVIARFRKA 124 Query: 123 YPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCV 182 P A ++++ + + G +D+ G +P + E LF+D Sbjct: 125 APLAELRIQPVGA-VMKELDAGRIDLAMGG----------FERIPERLASEPLFADDMVW 173 Query: 183 WLRKDHPALHQTWNLDTFLRYPHISICWEQSDT--------------------WALDNVL 222 +R D P ++ L+ PH++I +D LD Sbjct: 174 VMRADSPFANRQPTLEGLAALPHLAIASPDNDRAVSGIVSDAGLERRVVRDDPRILDQYF 233 Query: 223 QELGRERTIAMSLPEFEQSLFMAAQPDNLLLATAPR-YCQYYNQLHQLPLVALPLPFDES 281 +E G RT+AM+ P ++ + A+ D L A PR + + ++L L P P Sbjct: 234 EERGLRRTVAMTAPNPIVAMAIVAECD--LAAMMPRNLAEAFADRYKLALWKPPHP---- 287 Query: 282 QQKKLEVPFTLLWHKRNSHNPKIVWLRETIKNLYAS 317 + +WH+ + P + WLR I+++ Sbjct: 288 ---SALFQISTVWHRWHGDQPAVDWLRAMIRSVAEE 320 >UniRef50_Q2BMZ3 Putative transcriptional regulator, LysR family protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BMZ3_9GAMM Length = 303 Score = 253 bits (646), Expect = 9e-66, Method: Composition-based stats. Identities = 55/300 (18%), Positives = 115/300 (38%), Gaps = 18/300 (6%) Query: 18 LLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSMEQNLAE 77 ++++ER VT+AA+R+++T SA+S+ L++LR F DPL + + + + Sbjct: 14 VMLEERHVTRAAERLHLTQSALSRQLSQLREHFSDPLLIREGNEYLLSARAKQLLPKIQA 73 Query: 78 WMQMSNLLLD-KPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQATIKLRNWDYD 136 + + L + +F A + + + ++ P I W + Sbjct: 74 ILTEVDELSEGDSFDPLQCRRRFSFACTDHVAQFIFPEILGRLRDEAPGIDITFEMWRPE 133 Query: 137 SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPALHQTWN 196 L + + +DI ++LP + + D P + ++HP + Sbjct: 134 WLGRLGQLPLDIA----------STTTANLPENVRSIHIGQDSPVCLMAENHPLAACELS 183 Query: 197 LDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQPDNLLLATA 256 ++ L YP + + D L+ +G +R I +P F + L++ Sbjct: 184 IEKMLEYPFLRLNSGGDKDSFFDKALESMGLQRRIQYEVPFFSAAFQALEGSSLLMI-LP 242 Query: 257 PRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWLRETIKNLYA 316 + L + LPL + + + + WH+ + +P WLR+ I + Sbjct: 243 HHIAMNALEHFPLAVAQLPLA------EVPKNQYHMCWHEVHDQDPAHSWLRQLIAEVLR 296 >UniRef50_A9F0I7 Transcriptional regulator, LysR family n=20 Tax=Proteobacteria RepID=A9F0I7_SORC5 Length = 319 Score = 252 bits (645), Expect = 1e-65, Method: Composition-based stats. Identities = 69/298 (23%), Positives = 122/298 (40%), Gaps = 21/298 (7%) Query: 22 ERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSMEQNLAEWMQM 81 E SVT AA+R+ ++PSA+S++LA+LR DPL V + GL PTP + + + ++ +Q Sbjct: 18 EGSVTGAARRLRLSPSAMSRALARLRETLGDPLLVRAGRGLVPTPRALELRERVSHLVQG 77 Query: 82 SNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQIYQRYPQATIKLRNWDYDSLD 139 + +L + F L + AL ++ + P ++ Sbjct: 78 AEAVLRPAEELDLKRLVRTFTLRTSEGFVESFGPALIERTGAQAPGVRLRFVAKPDKDSA 137 Query: 140 AITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPALHQTWNLDT 199 + G VD+ + + + + LF D +R DHP Sbjct: 138 PLRTGAVDL---------ETGVVDEDTSPELRTQALFRDRFIGVVRSDHPLGRAKITPAR 188 Query: 200 FLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQPDNLLLATAPRY 259 + H+ +D L LG R + + F ++ +A D L+AT P Sbjct: 189 YAAGRHVVFSRRGVAKGRIDESLAALGLAREVVTIVGGFATAIALARATD--LIATVP-- 244 Query: 260 CQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWLRETIKNLYAS 317 ++ + + L + LPF E+ +LLWH R +P WLR++++ + A Sbjct: 245 -DHHTRSLRDGLFSFALPFAAP-----EITVSLLWHPRLDADPAHRWLRDSVREVVAG 296 >UniRef50_Q8KY13 LysR-type transcriptional activator n=1 Tax=Rhizobium sp. TAL1145 RepID=Q8KY13_9RHIZ Length = 320 Score = 252 bits (645), Expect = 1e-65, Method: Composition-based stats. Identities = 66/314 (21%), Positives = 129/314 (41%), Gaps = 21/314 (6%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 + +DLNLL LLMQERSVTKAA R T SA+S SL +LR F D LFV ++P Sbjct: 7 LNQIDLNLLRVFDLLMQERSVTKAADRAGRTQSAISHSLNRLREIFGDELFVKRAGSMNP 66 Query: 65 TPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQIYQR 122 T + + + + ++ + + P +F + + L L ++ + Sbjct: 67 TAQARELATVITQALSDIEGVVSQRINFKPSESHRQFRIGVTDYTSALYLPTLLEEFNSK 126 Query: 123 YPQATIKLRNWD-YDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPC 181 P A +++ Y++ + ++ ++D G S I VL Sbjct: 127 APNARLRIVPVYLYEAAELLSDPDLDCVLIGNPIIRES---------HIVETVLARHEML 177 Query: 182 VWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQS 241 + + ++ +L PH+ I + ++ D L +G R +A ++P + + Sbjct: 178 CAAWSGNAVIKD-LTMEKYLAMPHLQISPDGDESGVSDKALATIGLSRRVAATIPYYMVA 236 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 + ++ A A ++ ++ + PL +V +L++ + + Sbjct: 237 PKVLRGT-QMIAAFADGMLSLIDESSEILVTRPPLALP-------DVRVSLIYVRTKQTD 288 Query: 302 PKIVWLRETIKNLY 315 +WLR I+++ Sbjct: 289 AGHIWLRSCIRSIV 302 >UniRef50_Q5QVJ9 Transcriptional regulator, LysR family n=1 Tax=Idiomarina loihiensis RepID=Q5QVJ9_IDILO Length = 331 Score = 252 bits (645), Expect = 1e-65, Method: Composition-based stats. Identities = 70/319 (21%), Positives = 135/319 (42%), Gaps = 25/319 (7%) Query: 4 SITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLS 63 ++ +LDLNLL+ L L++E+ VT+AA+R+ ++ A S +L + R FDDPL + Sbjct: 29 NLRSLDLNLLVILHALLEEQHVTRAARRLALSQPATSNALDRCRHIFDDPLLERVAGEMR 88 Query: 64 PTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGL-KFELAAESPLMMIMLNALSKQIYQR 122 T S+++ L++ + +++ P + + L +I++ L ++ Sbjct: 89 LTAKAQSLKEPLSQALLAITAIVEIPKVELTQVRQTVRLIMADQPGLIVMTHLLTKLSTS 148 Query: 123 YPQATIKLRNW--DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 P+ + L W D+L + GE DI S +LP + + + Sbjct: 149 APKVNLSLLPWRSSKDALHRLENGEADIAIST----------FPALPPKFYRQQIAYESY 198 Query: 181 CVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQ 240 V +R HPA + +N D +L +PHI + E + +++ VL + G+ R + +P F Sbjct: 199 VVAMRASHPAAQK-FNADEWLAWPHIVVSGEGNARGSVEEVLAQQGKVRHVGAVVPNFTM 257 Query: 241 SLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH 300 + D + + L + P+ L WH R Sbjct: 258 IDPLIKATDMIATTPM----NCLSDPQGLAIFEPPIAVP-------GFSLHLAWHARRDS 306 Query: 301 NPKIVWLRETIKNLYASMA 319 + + + ET+++L+ Sbjct: 307 DLVVKHVIETLQHLFQKEG 325 >UniRef50_P55359 Nodulation protein D 1 n=250 Tax=Proteobacteria RepID=NODD1_RHISN Length = 322 Score = 252 bits (645), Expect = 1e-65, Method: Composition-based stats. Identities = 65/319 (20%), Positives = 129/319 (40%), Gaps = 21/319 (6%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 LDLNLL+ L LM ER +T AA+ IN++ A+S ++ +LR +F D LF + L Sbjct: 1 MRFKGLDLNLLVALDALMTERKLTAAARSINLSQPAMSAAITRLRTYFRDELFTMNGREL 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDK--PHHQTPRGLKFELAAESPLMMIMLNALSKQIY 120 PTP ++ + E + +L + P + F + + ++ L + ++ Sbjct: 61 VPTPRAEALAPAVREALLHIHLSIISWDPFNPAQSDRSFRIILSDFMTLMFLERVVVRVA 120 Query: 121 QRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 + P + +L + + + + RG+VD + LF + Sbjct: 121 REAPAVSFELLPFSDEPDELLRRGDVDFLILPEMFMSHT----------HPRAKLFDERF 170 Query: 181 CVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQ 240 + L ++D ++ H++ + + + +L+E G R + +++P F Sbjct: 171 VCVSCPTNQKLPPQLSIDNYVSMGHVAAQFGKQRPSVEEWLLREHGLRRRVEVAVPGFTM 230 Query: 241 SLFMAAQPDNLLLATAP-RYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 + D +AT P R ++ + L + LP P + W +S Sbjct: 231 IPSFLSGTDR--IATLPLRLAMHFAKAIPLRITELPQPI------FPAFTEAVQWPAPHS 282 Query: 300 HNPKIVWLRETIKNLYASM 318 +P +W+RE + + Sbjct: 283 SDPASLWMREIFLQEASRV 301 >UniRef50_A5V6I2 Transcriptional regulator, LysR family n=1 Tax=Sphingomonas wittichii RW1 RepID=A5V6I2_SPHWW Length = 301 Score = 252 bits (645), Expect = 1e-65, Method: Composition-based stats. Identities = 66/319 (20%), Positives = 124/319 (38%), Gaps = 21/319 (6%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 LDLNLL+ L + RSV+ AA+ ++++ SA+S +LA+LRA+FDD L V L Sbjct: 1 MRFQGLDLNLLVAFDTLAEHRSVSLAAEAMHLSQSAMSAALARLRAYFDDELLVPRGRTL 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTP--RGLKFELAAESPLMMIMLNALSKQIY 120 TP + + + + + + P P +F + A + ++L ++ Sbjct: 61 VLTPRAEQLAPEVRDTLLRIHATIAHPAAFDPIETKREFTIVASDYVQAVLLEPFMRKAA 120 Query: 121 QRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 P ++ +D RG +D+ S + + LF D Sbjct: 121 HHAPGMRFRILPISQQGIDEFKRGVIDLIIVAD----------SVILPEHPSQKLFEDEA 170 Query: 181 CVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTW-ALDNVLQELGRERTIAMSLPEFE 239 + DHP + +++ F H++ D +L E R I + +P F Sbjct: 171 KLICSADHPTIGDEISMEQFGTVGHVTTSLHHHRPGSLFDLMLLERSIARRIEIQVPAFS 230 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 + + + A R Y ++ + L++LP + + WH Sbjct: 231 MMAGAVVGTERVAILHA-RLATSYARILPIKLLSLPFALP-------PIREVIQWHALRQ 282 Query: 300 HNPKIVWLRETIKNLYASM 318 + + WL E + + A++ Sbjct: 283 RDRGLQWLLEALTSEAAAL 301 >UniRef50_A4XED3 Transcriptional regulator, LysR family n=1 Tax=Novosphingobium aromaticivorans DSM 12444 RepID=A4XED3_NOVAD Length = 333 Score = 251 bits (643), Expect = 2e-65, Method: Composition-based stats. Identities = 59/318 (18%), Positives = 124/318 (38%), Gaps = 22/318 (6%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 LDLNLL+ L L+ ERSV+ AA R+ ++ SA S +L +LR +F D L V + Sbjct: 1 MRFGRLDLNLLVALDALLTERSVSLAADRLCLSQSATSSALGRLREYFGDELLVVKGRNM 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNL--LLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIY 120 T + + + ++ + P + A ++L + Sbjct: 61 ILTARAEELIEPVRAVLEQIRTTVAVAPPFDPATTDRVIRIMASDYSTEVLLTDALATME 120 Query: 121 QRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 + P +++ ++AI RG +D+ + ++ ++LF D Sbjct: 121 RCAPSMRFEIQPMHDAPIEAIERGYIDLLLTIDY----------AISSDHPSQILFEDDY 170 Query: 181 CVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVL-QELGRERTIAMSLPEFE 239 V D+PA+ + + H+S + ++ A ++ + ++R + + P F Sbjct: 171 VVVGAADNPAMAEPMTRQLYFELGHVSARFGKARVPAFEDWFVRRQKQQRRVEVVAPSFL 230 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 + R + ++ ++ + +PL E + L W+ N+ Sbjct: 231 SLPGLVVGT--------RRIATMHRRMAEIVVRNMPLVIREIPFDIPPIREALQWNIANN 282 Query: 300 HNPKIVWLRETIKNLYAS 317 ++ + W+ E + L A+ Sbjct: 283 NDRALRWVVEQL-ELAAT 299 >UniRef50_Q0JY95 Transcriptional regulator, LysR-family n=4 Tax=Proteobacteria RepID=Q0JY95_RALEH Length = 318 Score = 251 bits (643), Expect = 2e-65, Method: Composition-based stats. Identities = 73/313 (23%), Positives = 123/313 (39%), Gaps = 19/313 (6%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 +I + DLNLL +L QE + ++AA R+ ++ A+S L +LR DPLFV +P GL Sbjct: 1 MNIGSKDLNLLYVFHVLYQEGNASRAAARMALSQPALSHKLNRLRDELGDPLFVRAPRGL 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLD--KPHHQTPRGLKFELAAESPLMMIMLNALSKQIY 120 +PTP ++ + + + D H R + + ++L AL ++ Sbjct: 61 TPTPRAHALAPQVQRLVGDLDAFYDACAGHDYLARSEHLHIYTTDYMEQLLLPALLPRLR 120 Query: 121 QRYPQATIKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 + P + N + + + +G D+ +G +LP + L S+ Sbjct: 121 SQAPGVVLVTHNTRGELPREELEKGTCDLAIAGF---------YENLPDTFHQQRLCSED 171 Query: 180 PCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFE 239 V + +P + +LD FL H+ +D L G +R + L F Sbjct: 172 FVVLASRANPRIADGLDLDAFLACEHLLTTLTGDLNGVVDRALARQGHKRRVVAGLSSFL 231 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 + + LL R LV LP+PF V +WH R Sbjct: 232 APSRLVRGTELLLTCL--RSVAEEAVARDPDLVLLPVPFALP-----HVDMMQIWHARTD 284 Query: 300 HNPKIVWLRETIK 312 + WLR+ I+ Sbjct: 285 ADRLRRWLRQQIQ 297 >UniRef50_C6B2W9 Transcriptional regulator, LysR family n=4 Tax=Rhizobiaceae RepID=C6B2W9_RHILS Length = 334 Score = 251 bits (642), Expect = 3e-65, Method: Composition-based stats. Identities = 69/329 (20%), Positives = 133/329 (40%), Gaps = 33/329 (10%) Query: 2 KKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLG 61 ++ +DLNLL+ + +M+ER V ++ +R+N++PSA+S L +LR DPLF+ +P G Sbjct: 4 HIDLSRIDLNLLVLFETVMEERHVGRSGQRLNLSPSAISHGLGRLRMLLGDPLFLKTPKG 63 Query: 62 LSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPR--GLKFELAAESPLMMIMLNALSKQI 119 + PT + +A+ + ++ P +F + A + + L L + Sbjct: 64 VVPTDRAEELAAPIADILARVRSVVATAEPFDPAHSQRRFTIGAPDGVSSVFLPPLLDLL 123 Query: 120 YQRYPQATIKLRNWDY------------DSLDAITRGEVDIGFSGRESHPRSRELLSSLP 167 + P I +R D+L A+ ++DI + + P Sbjct: 124 AKFAPGIAISVRQLLPKQGEPSPDLAWRDALAALEARDMDIAIIPQ----------AGFP 173 Query: 168 LAIDYEVLFSDVPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGR 227 + +L+ + + R+ HP L L T+ H+ + +DN+L G Sbjct: 174 IRFASLLLYEEDFVIAARQCHPFLIDQ-TLATYCAAQHLVVSHLGDTHGFVDNLLASHGC 232 Query: 228 ERTIAMSLPEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLE 287 R +A+++P F +L + A+ D + A R+ + + + V PLP Sbjct: 233 SRRVALTVPNFMLALAVLAETDFIS-ALPRRFVEMHAARFGVVSVNPPLPL-------GR 284 Query: 288 VPFTLLWHKRNSHNPKIVWLRETIKNLYA 316 K + + WL ++ Sbjct: 285 FAINATAPKAAIRDEGVAWLVRLLQASMD 313 >UniRef50_A6ARN3 Transcriptional regulator, LysR family n=4 Tax=Vibrio RepID=A6ARN3_VIBHA Length = 305 Score = 251 bits (641), Expect = 3e-65, Method: Composition-based stats. Identities = 67/322 (20%), Positives = 119/322 (36%), Gaps = 23/322 (7%) Query: 1 MKKSI--TTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNS 58 MK I +DLNLL+ L + RSV+ AA++ V+ SA+S SL++LR FDDPLF Sbjct: 1 MKDDIQWRNIDLNLLVTFSYLYRYRSVSLAAEKSFVSQSAMSHSLSRLRVLFDDPLFERK 60 Query: 59 PLGLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALS 116 ++PT + + + L P + I L Sbjct: 61 GHKMAPTEHAHYIAPTVHHLLDSIAKDLLTKSAFLPENYAGVCRIGLTDYAEFIFAPLLY 120 Query: 117 KQIYQRYPQATIKLRNWDYDSLDAI-TRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVL 175 +I +R P+A I N + + AI ++D+ + L + + L Sbjct: 121 DEIRKRAPEAQISFINVNRSNYVAITEHDKLDVIIGS----------MPVLDDNFESQYL 170 Query: 176 FSDVPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSL 235 +++ K ++ F + + S + +D L E G R + ++ Sbjct: 171 YTEKHVCLCDKRVLKGETQLSIHAFANIEQALVSPDGSLSTQVDKKLAEHGLSRKVTVAS 230 Query: 236 PEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWH 295 F + Q + + + + Q L V P+ + +LWH Sbjct: 231 RNFLTIRNLLKQRELVAIV-PEKMAQAEGFSDDLVSVQPPIAV-------ADFDIAMLWH 282 Query: 296 KRNSHNPKIVWLRETIKNLYAS 317 ++ K +WLR+ + L Sbjct: 283 TSRNNEDKGIWLRQLVAELITG 304 >UniRef50_A8KZI9 Transcriptional regulator, LysR family n=4 Tax=Actinomycetales RepID=A8KZI9_FRASN Length = 310 Score = 251 bits (641), Expect = 3e-65, Method: Composition-based stats. Identities = 76/313 (24%), Positives = 127/313 (40%), Gaps = 20/313 (6%) Query: 6 TTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPT 65 ++LDLNLL+ L L++ERSV AA+R+ +T SAVS++L +LR DDP+ V + + PT Sbjct: 8 SSLDLNLLVALDALLEERSVNAAARRLRLTESAVSRALGRLRRAMDDPVLVRAGHRMVPT 67 Query: 66 PLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQIYQRY 123 P ++++ + ++ ++ + F + A L + L ++ + Sbjct: 68 PRALAVQAEVHALVERAHAVFTPIREPDLATLARTFTILASDALTTAIGVDLLDRLTRDA 127 Query: 124 PQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVW 183 P ++ + D + G D+ + S I EVL + Sbjct: 128 PGVRVRFLPEPSATDDPLRDGTADLEIG----------DIDSTSPEIHIEVLGEEQALAV 177 Query: 184 LRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 +R HP + H++ LD VL G RT+A+S+P +L Sbjct: 178 VRAGHPLTRGRLTPERLAAARHVTASRRGRFAGPLDEVLAARGLRRTVAVSVPSHSAALL 237 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 + A D L+ P L L LVAL L D + WH R + Sbjct: 238 LVAGSD--LVGLVPARLGR-GLLDSLGLVALDLGLDLPT-----LTIAQAWHPRYEADAP 289 Query: 304 IVWLRETIKNLYA 316 WLR +++ Sbjct: 290 HRWLRGHVRDTIR 302 >UniRef50_A3X6E2 Transcriptional regulatory protein n=1 Tax=Roseobacter sp. MED193 RepID=A3X6E2_9RHOB Length = 303 Score = 251 bits (641), Expect = 4e-65, Method: Composition-based stats. Identities = 61/321 (19%), Positives = 115/321 (35%), Gaps = 24/321 (7%) Query: 1 MKKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPL 60 M LD L L+L+ S ++AA+ + VT S +S ++ +LR F DPLFV Sbjct: 1 MNPDPFALDFASLRTLRLVYAHGSFSRAAETLGVTQSTISYTMTRLREVFSDPLFVRQGT 60 Query: 61 GLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAES--PLMMIMLNALSKQ 118 G+ PT + + E + L P E+ + +L +++ Sbjct: 61 GMVPTERCGEIVSQVGELIDRFE-TLTAQREFDPAEASVEIGLSCNFYERVTILPHVTRI 119 Query: 119 IYQRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSD 178 + + P +K+ + + R E DI + L + Sbjct: 120 LRREAPGIKLKVISSSAQGKQQLLRSESDILIGP----------IRIDDSGYYRRSLLRE 169 Query: 179 VPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEF 238 + + +P + +++ F++ P + I + V++ G M +P Sbjct: 170 EYTCVMDRSNPLAEGSLSVEDFVKAPQVVINYGGGFRSRFLVVMEAAGHVPNTVMEVPSP 229 Query: 239 EQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRN 298 + AQ D ++AT P +V++P PF E+ L W R Sbjct: 230 ANLPDLLAQTD--MIATVPFRISQM---FDDRVVSVPCPFPA------ELSIDLYWTART 278 Query: 299 SHNPKIVWLRETIKNLYASMA 319 + W+R I + ++ Sbjct: 279 HVSAPHKWVRSKIAEAASRLS 299 >UniRef50_A0KG94 Transcriptional regulator, LysR family n=5 Tax=Gammaproteobacteria RepID=A0KG94_AERHH Length = 318 Score = 250 bits (640), Expect = 5e-65, Method: Composition-based stats. Identities = 68/318 (21%), Positives = 133/318 (41%), Gaps = 33/318 (10%) Query: 15 CLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSMEQN 74 LM + SVT+AA+ + ++ A+S +L +LR +F DPL V +P G+ PTP + Sbjct: 14 AFDALMAQGSVTRAAETLFISQPAMSHALNRLRTFFGDPLLVRTPQGMLPTPRAQRLHLG 73 Query: 75 LAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQIYQRYPQATIKLRN 132 + + +++ L P +F L + +++ L +++ + P TI++R Sbjct: 74 VQQALRLLEQQLSDEEVFEPSQSKRRFVLCTTDYVECVLIPPLIQRLKRLAPAVTIEIRI 133 Query: 133 WDYDSLDA-ITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHP-- 189 +A + GE+D+ E +P + E ++ +R D P Sbjct: 134 LRDTLPEAELASGEIDLVLGFDEYMQ--------VPGYLGKETWLTEPLAGLVRADLPMA 185 Query: 190 ------------ALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPE 237 L + +L + PH+ + +LD L+ LG RTI+++ Sbjct: 186 APALAESGDEPAILAERISLAQLIEMPHVFHSPLGTSEASLDRYLKTLGFSRTISVNSQS 245 Query: 238 FEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKR 297 + + + +Q D+LL+ + L + LP + + +WH Sbjct: 246 YMSAAAIVSQSDHLLV-LPSMVAELLASHWPLKSLPLP-------EDVPDYHLNCVWHPV 297 Query: 298 NSHNPKIVWLRETIKNLY 315 ++ P +VWL++ +K L Sbjct: 298 HAQQPALVWLKDLMKELV 315 >UniRef50_B7X2W7 Transcriptional regulator, LysR family n=1 Tax=Comamonas testosteroni KF-1 RepID=B7X2W7_COMTE Length = 302 Score = 250 bits (640), Expect = 5e-65, Method: Composition-based stats. Identities = 54/299 (18%), Positives = 110/299 (36%), Gaps = 22/299 (7%) Query: 22 ERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSMEQNLAEWMQM 81 ER++++A +R++++ A+S +LA+LR +F D L + + TP + + + + E + Sbjct: 20 ERNISRAGERLHLSQPAMSNALARLRNFFGDELLASQGRQMVLTPRALGLIEPVREVLMR 79 Query: 82 SNLLLDKPHHQTP--RGLKFELAAESPLMMIMLNALSKQIYQRYPQATIKLRNWDYDSLD 139 + + P P F L + + L + +YQ+ ++LR+ + + Sbjct: 80 IDSTITTPPLFDPTESTRTFVLLLSDFTTAVFIPPLLEALYQQARGIGLELRSLNDKPAE 139 Query: 140 AITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPALHQTWNLDT 199 + +G+ D+ + LF + +H + + + Sbjct: 140 QLEQGDADLLIIPEQFAAV----------DHPRAPLFEEQYLCVTWANHSRIREELTFND 189 Query: 200 FLRYPHISICW-EQSDTWALDNV-LQELGRERTIAMSLPEFEQSLFMAAQPDNLLLATAP 257 +L H+ + A D L G R + +S P M D + Sbjct: 190 YLECGHVVANYATGQQRAAFDGWFLDRFGINRKVEVSAPSMAALPQMVVGTDRIA-TVHR 248 Query: 258 RYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWLRETIKNLYA 316 R ++ + L PL Q TL WH+ +P + W+RE + Sbjct: 249 RLALQAEKVLPIKLWPPPLEVPMLVQ-------TLQWHRHRDADPALQWMRELAFRVGR 300 >UniRef50_A1K8D7 Transcriptional regulator, LysR family n=1 Tax=Azoarcus sp. BH72 RepID=A1K8D7_AZOSB Length = 298 Score = 250 bits (639), Expect = 5e-65, Method: Composition-based stats. Identities = 68/318 (21%), Positives = 128/318 (40%), Gaps = 26/318 (8%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 +I ++DLNLL + + ER+V++AA R+ +T +VS L +LR F DPLFV + G+ Sbjct: 1 MNIQSVDLNLLKIFEAVYLERNVSRAAVRLELTQPSVSHGLTRLRLLFGDPLFVRTRSGV 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQIY 120 PT + + + + +++ LD+ H P F L +I L L + + Sbjct: 61 EPTVVADRIAGPVQQALRVLQTTLDEHAHFEPASSGRTFRLHMSDFGEVIFLPKLMRALL 120 Query: 121 QRYPQATIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 +R P I+ R + A+ G++D+ L L + L +D Sbjct: 121 ERAPGVRIETRQLGGVELAAALDSGQIDLAIGY----------LPVLDQGFECRHLLADE 170 Query: 180 PCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFE 239 V + H + F I++ L+E G + + +P F Sbjct: 171 YAVIAPR-HLIPSGGKGDNAFNGLDFIAVTSHPQTLAI----LRECGLLDRVKLWVPHFM 225 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 + A+ + +A ++ ++ LP + + L W++R + Sbjct: 226 VVPAILAERNFAAVA-PREVVHAFSPRSRVRSFPLP-------ALQRGMDVNLYWNRRYT 277 Query: 300 HNPKIVWLRETIKNLYAS 317 +P W+RE + +L+ Sbjct: 278 GDPGHAWMRELVADLFDR 295 >UniRef50_Q11CG0 Transcriptional regulator, LysR family n=1 Tax=Chelativorans sp. BNC1 RepID=Q11CG0_MESSB Length = 304 Score = 250 bits (639), Expect = 6e-65, Method: Composition-based stats. Identities = 77/322 (23%), Positives = 128/322 (39%), Gaps = 24/322 (7%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 +DL L +LM+ER+V++AA ++ + +S+ LAKLRA+FDDPL V S + Sbjct: 1 MDRWKIDLFTLRGFSILMEERNVSRAAFKLGLKQPTMSRMLAKLRAYFDDPLLVWSGGHM 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGL--KFELAAESPLMMIMLNALSKQIY 120 PTP + +E + + + L P P+ LAA + L + ++ Sbjct: 61 VPTPRAILLESEIHQVLATMERLSSSPQEFDPKTSGLTIRLAATGYTENVFLARVMSEVA 120 Query: 121 QRYPQATIKLRNWDY-DSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 R P +++R D A+ +GEVD + + VLF+D Sbjct: 121 VRAPGVQLEIRPPDRLHDTSALEKGEVDFLVGWNVTPA----------PVLRSRVLFTDE 170 Query: 180 PCVWLRKDHPALHQT-WNLDTFLRYPHISICWEQSDTW--ALDNVLQELGRERTIAMSLP 236 R HPAL + + ++ PH+ T L L + G + + Sbjct: 171 LVCIARAGHPALEDGNLSYERYVALPHVQFDTPSKTTTELLLHERLAQRGDRPFVQFRVQ 230 Query: 237 EFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHK 296 + A D L+ + R+ Y Q +QL + LP+ Q + WH+ Sbjct: 231 NLLTVAEIVANSD-LIATVSKRFVISYLQQYQLSIAELPVRLPVMQNR-------AWWHE 282 Query: 297 RNSHNPKIVWLRETIKNLYASM 318 R P W R + + +M Sbjct: 283 RMHREPYSHWFRSLLAEIGKTM 304 >UniRef50_A4WEP5 Transcriptional regulator, LysR family n=1 Tax=Enterobacter sp. 638 RepID=A4WEP5_ENT38 Length = 308 Score = 249 bits (638), Expect = 7e-65, Method: Composition-based stats. Identities = 66/302 (21%), Positives = 131/302 (43%), Gaps = 23/302 (7%) Query: 21 QERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSMEQNLAEWMQ 80 +E SV++AA+++++ AVS +LA+LR F+DPLFV + G+ PTP ++ L M+ Sbjct: 25 REGSVSRAAEKLHLGQPAVSNALARLREMFNDPLFVRTAGGMIPTPRAEALIAELGPLME 84 Query: 81 MSNLLLDKPHHQTPRGLK--FELAAESPLMMIMLNALSKQIYQRYPQATIKLRNWDY-DS 137 +L +P TP F L + ++ L + + P T+++ D Sbjct: 85 QMQHVLFQPASFTPASASHVFRLGMSDWVESWLMPELQAYVIREAPGITLQVSASDPFRD 144 Query: 138 LDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPALHQTWNL 197 + + E+D+ S +S + + E + S + +L + Sbjct: 145 GKQVLQREIDLAISVGQSTAAT----------LRRENIRSLNFSTLWHPEQLSLAAPLTV 194 Query: 198 DTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQPDNLLLATAP 257 ++ + H+ + + S A+D+ L G+ R + P F + + LAT P Sbjct: 195 KNYVEHDHVLVSYRGSAWSAIDDQLALQGQSRKVRYVTPHFSSLPPLLKR--IPALATVP 252 Query: 258 R-YCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWLRETIKNLYA 316 + + L +P+ + E+P +LLWHK++ ++ + WLR + + Sbjct: 253 SGLAAAWVTHYGLRCSPVPI-------QTPEIPLSLLWHKKSDNDMPLNWLRGVLGRVIK 305 Query: 317 SM 318 ++ Sbjct: 306 AL 307 >UniRef50_Q081K6 Transcriptional regulator, LysR family n=2 Tax=Alteromonadales RepID=Q081K6_SHEFN Length = 326 Score = 249 bits (638), Expect = 8e-65, Method: Composition-based stats. Identities = 72/316 (22%), Positives = 127/316 (40%), Gaps = 26/316 (8%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 K+I LDLNLL + L E+++T A+K + +TPSAVS ++ +LR +DPLFV L + Sbjct: 23 KAIQQLDLNLLKIFEALYSEQNMTLASKSLFITPSAVSHAIKRLRLVLNDPLFVRQGLQM 82 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGL--KFELAAESPLMMIMLNALSKQIY 120 PT M L + +L + P F++A L ++ L KQ+ Sbjct: 83 QPTAACQRMAPQLISALNRIRQVLQQCGEFDPLTTEQTFKIAIHEALESQIMPTLIKQVV 142 Query: 121 QRYPQATIKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 + P A I + +++ + GEVD+ ++ ++ + ++ L SD Sbjct: 143 KLIPHAKIASMSLSRENIARQLANGEVDLAI----------DVARAVNAPLAHKTLLSDP 192 Query: 180 PCVWLRKD----HPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSL 235 CV + + H + H+++ D +LQ+ G R I Sbjct: 193 FCVLIDRRQHAMHLEPSTKLTPTDYANAEHVAVSSRPIGRVMEDILLQQQGVNRHIKYRC 252 Query: 236 PEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWH 295 ++ + + L+L + + L + +P ++ L WH Sbjct: 253 QSYQTAAKIVIGS-PLMLTLPRSIAEQF-IHPDLHVCTMPFELP-------DIDTHLYWH 303 Query: 296 KRNSHNPKIVWLRETI 311 +P VWLR I Sbjct: 304 MNTETDPAFVWLRAQI 319 >UniRef50_A3Y6R5 Transcriptional regulator, LysR family protein n=2 Tax=Gammaproteobacteria RepID=A3Y6R5_9GAMM Length = 312 Score = 249 bits (638), Expect = 8e-65, Method: Composition-based stats. Identities = 69/311 (22%), Positives = 131/311 (42%), Gaps = 21/311 (6%) Query: 9 DLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLM 68 + LL L ++Q R++T +A +NVT SA+SK+L+++R F D + + T Sbjct: 3 NYKLLPALVSILQTRNLTASAAELNVTQSAMSKTLSQIREAFHDKILIREGNQFVLTQKG 62 Query: 69 VSMEQNLAEWMQMSNLLLDKPH-HQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQAT 127 ++ L + MQ + L +F +A+ + ++ +++ ++ P + Sbjct: 63 EQLKTQLPDLMQTLDGLYAPNTMELELCQRRFSIASSDYVAQAVVPMITRVMHDEAPNVS 122 Query: 128 IKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKD 187 ++ + W L + +D+ + +P + D V LR+ Sbjct: 123 LEFQAWQPSKLTELAETSIDLV----------TTIAEEVPENLQGRWCAEDELVVMLRQG 172 Query: 188 HPAL--HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMA 245 HP L Q ++LD + + HI I LD L GR+R + + +P ++ ++ + Sbjct: 173 HPILNKAQAFSLDDYCQSKHILISGGGDKNSPLDQALLAEGRQRQVLIQVPFYQAAIELV 232 Query: 246 AQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIV 305 D LL + Q H + L LP+ +Q + LLWH ++ H+P+ Sbjct: 233 LNTDALLTLPM-HIAGDFAQRHDVTLRRLPISLVPNQ-------YYLLWHTKHHHDPEHK 284 Query: 306 WLRETIKNLYA 316 W RE L Sbjct: 285 WFRELCTGLLQ 295 >UniRef50_A8FU12 Transcriptional regulator n=2 Tax=Gammaproteobacteria RepID=A8FU12_SHESH Length = 304 Score = 249 bits (637), Expect = 9e-65, Method: Composition-based stats. Identities = 74/317 (23%), Positives = 136/317 (42%), Gaps = 23/317 (7%) Query: 2 KKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLG 61 + ++ +DLNLL L+ L++ER V +AA+++NV+ SA+S +LA+LR FDD LF+ + G Sbjct: 3 ENNLAKVDLNLLKSLRALIEERHVGRAAQKMNVSQSAMSHTLARLRGVFDDSLFIRNAKG 62 Query: 62 LSPTPLMVSMEQNLAEWMQMSNLLLDKPH-HQTPRGLKFELAAESPLMMIMLNALSKQIY 120 L PT + + L ++ + LL + F + ++ L+ K+I Sbjct: 63 LEPTARAIELSDKLRFILREIDSLLAPKTLELSHIHAHFRIQTHDFILASYLSKAFKRIN 122 Query: 121 QRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 P I ++ D + D + GE+++ + L + Sbjct: 123 HEAPNILIDIKILDETAYDKLDDGELEMIIGAGLQAK----------PRFMQKRLTDENL 172 Query: 181 CVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGR-ERTIAMSLPEFE 239 L K +P L W +T RYPHI + + +G +R I Sbjct: 173 VCLLDKGNPVLK-NWTPETIFRYPHIKSSLLDDRDDPVSKYGKAMGLPKRKIGFLAETLN 231 Query: 240 QSLFMAAQPDNLLLATAP-RYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRN 298 L + + D L+A P + +Q++ L + P P + +WH+R+ Sbjct: 232 FQLPLLSDSD--LIAFLPDSIAKKGSQVYGLVVKECPFPLP-------PLTIRAMWHERH 282 Query: 299 SHNPKIVWLRETIKNLY 315 ++ W+RE I++++ Sbjct: 283 QNDVVHQWIREKIEDVF 299 >UniRef50_A8FYY5 Transcriptional regulator, LysR family n=2 Tax=Shewanella RepID=A8FYY5_SHESH Length = 331 Score = 249 bits (636), Expect = 1e-64, Method: Composition-based stats. Identities = 79/320 (24%), Positives = 130/320 (40%), Gaps = 22/320 (6%) Query: 1 MKKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPL 60 M + LDLNLL L R+V+ AA+ +N++ SA S +LA+LR DD LF+ S Sbjct: 30 MHNRLHRLDLNLLKLFSALYVHRNVSVAAESMNLSQSAFSHALARLRVQLDDELFIRSRA 89 Query: 61 GLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGLK--FELAAESPLMMIMLNALSKQ 118 + PT S+ + +AE + H P + F A ++M+ L Sbjct: 90 QMIPTRYADSIHEPVAEVLSTLGSCFAPQTHFIPHESRHEFNFAVTDFTALLMMPRLMAH 149 Query: 119 IYQRYPQATIKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFS 177 + + P I L + L A GE+D L I+ + + Sbjct: 150 LERHAPLVRINLTSRSEKLPLAAFEAGELDFALGYSHFDEVQTPL-------INQWIWWE 202 Query: 178 DVPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPE 237 D C + +L TFL HI + +D L + G +R IA+ LP Sbjct: 203 DCYCTIASDK----LERMDLKTFLSRRHILVSPWGEKIGVVDEQLSKQGLQRDIALQLPN 258 Query: 238 FEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKR 297 + F+ A + LL T P++ LP+ +P D + + K Sbjct: 259 VMNAPFVVAGSELLL--TLPKFAAQ-ALQGALPVKRFDVPVDMPTYQLKLFTY-----KP 310 Query: 298 NSHNPKIVWLRETIKNLYAS 317 + + P+ +W+RE +++L+ S Sbjct: 311 SENTPENLWMREQLQSLFKS 330 >UniRef50_A6V5Q0 MexT protein n=1 Tax=Pseudomonas aeruginosa PA7 RepID=A6V5Q0_PSEA7 Length = 308 Score = 249 bits (636), Expect = 1e-64, Method: Composition-based stats. Identities = 67/325 (20%), Positives = 123/325 (37%), Gaps = 31/325 (9%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 ++I +DLNLLL LM ERS T+AA ++VT AVS +L +LR F D LF+ S G+ Sbjct: 7 RNIARIDLNLLLTFHCLMSERSATRAAVVLHVTQGAVSAALRRLREHFGDELFIRSASGM 66 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTP--RGLKFELAAESPLMMIMLNALSKQIY 120 PT + + +AE + + +L +P F +A + + + Sbjct: 67 QPTRKAMELAPRIAEALTSISGVLAAEPEFSPHDSSYVFNIALSDDIESYLAPCIVNAAA 126 Query: 121 QRYPQATIKLRNWDYDSLDA-ITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 + + + ++D+ + + +VLFS Sbjct: 127 AEGLGVSFAFHQSNSSLWKQSLLDPDMDLVICSEPKDFNT---------SYSSQVLFSSS 177 Query: 180 PCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFE 239 R LD + H+ I ++ +D++ + G R + S F Sbjct: 178 YSCLFRPRGSMAGAAIGLDDYFAANHVRISYDGR-RGFIDDLFESAGYARRVTASFTHFA 236 Query: 240 QSLFMAAQPDNLLLATAPRYCQ-YYNQLHQLPLVALPLPFDESQQKKLEVPFTLLW---- 294 +L + ++AT P + Y+++ L +PLP + ++W Sbjct: 237 GALSTLMSGE--VIATLPTFAAETYSRMMDLHCCPVPLPVPSFRC-------FMVWDVAK 287 Query: 295 HKRNSHNPKIVWLRETIKNLYASMA 319 H + H+ WLR + + + Sbjct: 288 HNKTHHD----WLRRFVGEIAQRLG 308 >UniRef50_D0J6E9 Transcriptional regulator, LysR family n=2 Tax=Comamonas testosteroni CNB-2 RepID=D0J6E9_COMTE Length = 317 Score = 248 bits (635), Expect = 1e-64, Method: Composition-based stats. Identities = 61/304 (20%), Positives = 114/304 (37%), Gaps = 18/304 (5%) Query: 15 CLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSMEQN 74 L + RSV AA + ++PSA S +LA+LR D LF S + PTP M + Sbjct: 25 VFDALFRHRSVVAAADELAISPSACSHALARLREGLGDELFFRSGSSMQPTPRATEMAEG 84 Query: 75 LAEWMQMSNLLLDKPHHQTP--RGLKFELAAESPLMMIMLNALSKQIYQRYPQATIKLRN 132 + + + L P P F AA ++ AL +I P +++ + Sbjct: 85 ITLALHTLSDQLGDPAAFAPGSSTQSFTFAATDFTTFALMPALISRIEHEAPHVRLRVVH 144 Query: 133 W-DYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPAL 191 D+ + + + ++E + L +D V R+ HP + Sbjct: 145 SRHRDAYSDLVQEGAHFVMGFSDEFSPAQEGVEVLQG-------HTDAYVVVARRGHPRI 197 Query: 192 HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQPDNL 251 + ++ +L H+ + Q + +D+ L + G R IA+ LP + F+ A D L Sbjct: 198 GKRLSMAQYLAERHVVVKPWQEEKGVIDSALSKGGWTREIAIELPSVMAAPFIVANSD-L 256 Query: 252 LLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWLRETI 311 L+ + + P + + R+ +P W+R + Sbjct: 257 LITLPRMAALQLEASAAIAIFKAPFEVP-------SYTLNVYFQHRHLSSPWHRWMRARL 309 Query: 312 KNLY 315 +++ Sbjct: 310 ESIL 313 >UniRef50_Q0BCW3 Transcriptional regulator, LysR family n=30 Tax=Proteobacteria RepID=Q0BCW3_BURCM Length = 342 Score = 248 bits (635), Expect = 2e-64, Method: Composition-based stats. Identities = 65/303 (21%), Positives = 110/303 (36%), Gaps = 18/303 (5%) Query: 15 CLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSMEQN 74 L + RSV AA + ++PSA+S +LA+LR D LFV + PT + Sbjct: 50 AFDALYRHRSVAAAAHELAMSPSALSHALARLRDAIGDALFVRLGNEMQPTVRADDIATW 109 Query: 75 LAEWMQMSNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQIYQRYPQATIKLRN 132 + + + L + P F AA +L AL +I + P+ I++ + Sbjct: 110 AGDALDTMSKGLARARRFDPAQSDRTFVFAASDYTAFAVLPALLARIERVAPRLRIRVVH 169 Query: 133 WDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPAL 191 + S+D + G +D E + FSD V HP + Sbjct: 170 SERKISIDELAAGRIDFALGYHEESTADSPGIEDFD-------WFSDDYVVIASAAHPDI 222 Query: 192 HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQPDNL 251 + LD +L H+ + +D VL LG R +A+ LP + F A+ L Sbjct: 223 RRRLTLDQYLAARHVVVTPWNESRGVVDYVLDRLGLARQVAVRLPSVLAAPFAIAES-TL 281 Query: 252 LLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWLRETI 311 L+ R Q + + P + H +++ W+R + Sbjct: 282 LMTVPNRAAQALRHAAPIRIFPAPFEIP-------RYTVKVYSHAKHARTDAHRWIRAQL 334 Query: 312 KNL 314 + Sbjct: 335 LDA 337 >UniRef50_Q3S4D5 LysR-like regular protein n=1 Tax=Polaromonas naphthalenivorans CJ2 RepID=Q3S4D5_POLNA Length = 301 Score = 248 bits (635), Expect = 2e-64, Method: Composition-based stats. Identities = 59/291 (20%), Positives = 107/291 (36%), Gaps = 18/291 (6%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 + +DLNLL+ L+ +RSV+ +A+++ +T AVS +L +LRA D LF+ + G+ Sbjct: 1 MDLREIDLNLLVVFNQLLLDRSVSTSAEKLGLTQPAVSNALKRLRAVLKDELFLRTSRGM 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTP--RGLKFELAAESPLMMIMLNALSKQIY 120 PTP + + + + + + P F LA M + L + Sbjct: 61 EPTPYALHLAEPVIYALNALQTAFTTRNSFDPLASTRTFNLAMTDIGEMYFVPPLMNALS 120 Query: 121 QRYPQATIKLRNWDYDSL-DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 + P I + +L + + G VD+ LL +L LF Sbjct: 121 EAAPHVRISTVRPNAGNLKEDMESGTVDLALG----------LLPNLQTGFFQRRLFLHK 170 Query: 180 PCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFE 239 RK HP L F H+ I + +D +L G +R + + +P F Sbjct: 171 YVCMFRKGHPLAKSPMTLKQFTELDHVGILAANTGHGEVDGLLDRAGIKRKMRLVVPHFI 230 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPF 290 + D + + + + + + +P + P Sbjct: 231 AVGHI--TSDYR---SHRHFAGTVCRAMRSAIWSCYVPPSGPPARHSNQPL 276 >UniRef50_A6V8B0 Transcriptional regulator, LysR family n=10 Tax=Proteobacteria RepID=A6V8B0_PSEA7 Length = 310 Score = 248 bits (634), Expect = 2e-64, Method: Composition-based stats. Identities = 72/313 (23%), Positives = 126/313 (40%), Gaps = 24/313 (7%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 ++ LDLNL +++ +ER++T+AA ++++ SAVS +LA+LR DPLFV G++P Sbjct: 10 LSRLDLNLFRVFEVVYRERNLTRAAALLHLSQSAVSHALARLREQLGDPLFVRQGRGVAP 69 Query: 65 TPLMVSMEQNLAEWMQMSNLLLDKPHHQTPR--GLKFELAAESPLMMIMLNALSKQIYQR 122 TPL + + + + + + PR F L L ++L + Q Sbjct: 70 TPLAERLAPGIRDALAGLQRSVARCQSFDPRHDARTFLLNMPEQLEPLVLPDFLGHLRQV 129 Query: 123 YPQATIKLRNWDYDSLD-AITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPC 181 PQ ++ + + L + G +D E+ A+ + L D Sbjct: 130 APQVEVRCSSLHWAELKTELEAGRIDAAV----------EVARPTDAALRRQPLLEDRLW 179 Query: 182 VWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQS 241 V P + + +L H+++ + D L +LG R + + + Sbjct: 180 VMAG---PEFAGELSAERYLAAAHVAVTSRRRGICIEDLALGQLGLTRKVRQRCQHYLSA 236 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 + AQ LL T RY + N+ L+ +PL V L W ++ Sbjct: 237 ALLVAQGGYLLTLT-RRYAELLNRGLGNRLLPMPLALPA-------VALNLYWSRQADAE 288 Query: 302 PKIVWLRETIKNL 314 P WLR + L Sbjct: 289 PGGRWLRGELMEL 301 >UniRef50_A6F7C1 Transcriptional regulator n=1 Tax=Moritella sp. PE36 RepID=A6F7C1_9GAMM Length = 308 Score = 248 bits (633), Expect = 2e-64, Method: Composition-based stats. Identities = 72/288 (25%), Positives = 117/288 (40%), Gaps = 19/288 (6%) Query: 25 VTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSMEQNLAEWMQMSNL 84 VT AA+R +T SA+SK+LAKLR F DPL + T ++ LA+ + + Sbjct: 24 VTAAAQRQYITQSAMSKNLAKLREIFADPLLIKMDNKSQLTEKAKQLKPELAQILNNIDG 83 Query: 85 LL-DKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQATIKLRNWDYDSLDAITR 143 LL +F +A+ + +L A +Y P + L WD +L A+ R Sbjct: 84 LLMTGGFDPLQSQREFTIASTDYVTDYILPAALAHLYLHAPNIKLNLTYWDKFTLAAMER 143 Query: 144 GEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPALHQTWNLDTFLRY 203 GE+D+G ++ + Y L D +R+ HP ++ L + +Y Sbjct: 144 GEIDLG----------ATIIRPEHKHLSYLPLEKDNYVCIMRQGHPLENEVLTLANYTQY 193 Query: 204 PHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQPDNLLLATAPRYCQYY 263 PH I +D L G R +A+ +P + + + A+ D+LL Sbjct: 194 PHSIITSGADKASDIDVALSAQGLFREVALRIPSYSSAFSILAKTDHLL-TIPNSIADKL 252 Query: 264 NQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWLRETI 311 Q LP+ Q ++WH R H+ WLR+ + Sbjct: 253 IIGEQFIRKDLPIKLPILQA-------AIIWHPRFDHDLAHKWLRDEL 293 >UniRef50_B5ZKB2 Transcriptional regulator, LysR family n=2 Tax=Gluconacetobacter diazotrophicus PAl 5 RepID=B5ZKB2_GLUDA Length = 317 Score = 248 bits (633), Expect = 3e-64, Method: Composition-based stats. Identities = 83/323 (25%), Positives = 135/323 (41%), Gaps = 21/323 (6%) Query: 1 MKKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPL 60 M DLNLL + +L++E SVT AA+R+ V+ + +S++L++LR F D + V S Sbjct: 1 MAHVAHGYDLNLLQAMNVLVEESSVTGAAERLQVSAATMSRTLSRLRETFHDAILVQSGR 60 Query: 61 GLSPTPLMVSMEQNLAEWMQMSNLLLDKPH--HQTPRGLKFELAAESPLMMIMLNALSKQ 118 + PTP + M+ +++ + + L H T F + A ++ AL + Sbjct: 61 HMVPTPRALQMQPRVSQILSAISDLYRPRHALDFTGLTPTFRIRAADVVIGSYAEALLRA 120 Query: 119 IYQRYPQATIKLR-NWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFS 177 + P T+ + D D + +G +D+ + L I + LF Sbjct: 121 LRADCPDTTLIFTAESNSDDSDFLRQGGIDLYIGAT----------ALLRPEIMRQTLFE 170 Query: 178 DVPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQEL-GRERTIAMSLP 236 +R HP L + Y HI++ +D VL + G ERT+A+ L Sbjct: 171 SRFRGVVRAGHPILLGKITPQALVAYEHIAVSRRGRRRGPIDEVLADQYGLERTVALLLT 230 Query: 237 EFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHK 296 F +L +Q D L+ AP L +L L PLP D V WH Sbjct: 231 SFYAALQGLSQTD--LILPAPDILTDAAMLDRLGLYGFPLPLDL-----EPVTIFQAWHP 283 Query: 297 RNSHNPKIVWLRETIKNLYASMA 319 R+ + WLR T+ + + A Sbjct: 284 RHDTDQVHQWLRRTVLRVMSPRA 306 >UniRef50_A9R140 Substrate-binding transcriptional regulator, LysR family n=34 Tax=Enterobacteriaceae RepID=A9R140_YERPG Length = 322 Score = 248 bits (633), Expect = 3e-64, Method: Composition-based stats. Identities = 58/312 (18%), Positives = 123/312 (39%), Gaps = 21/312 (6%) Query: 4 SITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLS 63 + ++DLNLL +MQ ++VT+AA+ + ++ AVS ++A+L+ F+D LFV G+ Sbjct: 25 HLRSVDLNLLTVFDAVMQMQNVTRAAQSLGMSQPAVSNAVARLKVMFNDELFVRYGRGIQ 84 Query: 64 PTPLMVSMEQNLAEWMQMSNLLL-DKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQR 122 PT + + + +Q+ L F L+ SPL + + + +++ Q Sbjct: 85 PTARARQLFGPVRQALQLVQNELPGAGFEAKNSERLFNLSICSPLDVRLAAQIVQRVKQS 144 Query: 123 YPQATIKLRN-WDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPC 181 P + +++ + + + E + E LF D Sbjct: 145 APNVQLVIKSYLNDNIEHQLRYQETEFVIGYTEFDR----------PDFHRIPLFKDELV 194 Query: 182 VWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQS 241 + + KDHP ++ + + L H + ++ + ++IA + Sbjct: 195 LAVSKDHPRINDSITENQLLSESHAVVSLDKKG-SFSEPYYDSTTSTQSIAYESTDMNSV 253 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 L + +Q + +A + Y++ L L++LP + L WH+ + Sbjct: 254 LNIVSQTYFVAIA-PRWLVKTYSEALNLKLISLP-------WENTSRACYLTWHESTDRD 305 Query: 302 PKIVWLRETIKN 313 W++ + Sbjct: 306 KGHQWMKALLGQ 317 >UniRef50_Q15XK7 Transcriptional regulator, LysR family n=1 Tax=Pseudoalteromonas atlantica T6c RepID=Q15XK7_PSEA6 Length = 302 Score = 247 bits (632), Expect = 3e-64, Method: Composition-based stats. Identities = 60/316 (18%), Positives = 134/316 (42%), Gaps = 21/316 (6%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 LDLNLL+ L +L++E+++T++A+R++++ SA S L++LRA+F+D L V + Sbjct: 1 MRFEQLDLNLLVALDILIEEQNITRSAERLHLSQSATSGILSRLRAFFEDDLLVQIGKKM 60 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLL--DKPHHQTPRGLKFELAAESPLMMIMLNALSKQIY 120 PTP + ++ +A + + K ++ F++ A ++ ++L+ + ++ Sbjct: 61 QPTPFALELQGPVAGVLATVRGSIIGKKANNPEHSERHFKIIASDYVIQVLLSHVVAEVA 120 Query: 121 QRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP 180 + P+ T + ++ +++G D+ + L SD Sbjct: 121 KLAPKVTFEFLTPFAHEMNILSKGGADMMVAPEAIILS----------NYSSASLISDEL 170 Query: 181 CVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVL-QELGRERTIAMSLPEFE 239 ++ + + F H+S+ + + +++ L L R IA+ +F Sbjct: 171 VCIADINNTEVGDELTFEQFNAMGHVSVGFARVSLLSIEQWLINTLETNRKIAVITSDFS 230 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 ++ + + + + + Q + V LP ++ +L+WH Sbjct: 231 TMVYALLNTNRIAI-LPRHFVDMHIQREAVKTVKLPFSPPNLKE-------SLMWHPTLD 282 Query: 300 HNPKIVWLRETIKNLY 315 ++P WLRE I Sbjct: 283 NDPMHRWLREKIIECA 298 >UniRef50_A6UK78 Transcriptional regulator, LysR family n=2 Tax=Sinorhizobium RepID=A6UK78_SINMW Length = 310 Score = 247 bits (632), Expect = 4e-64, Method: Composition-based stats. Identities = 76/300 (25%), Positives = 124/300 (41%), Gaps = 20/300 (6%) Query: 21 QERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSMEQNLAEWMQ 80 +ERSVT+AA R+ ++ A S++LA+LR F D + V+ P G T M +L + Sbjct: 28 EERSVTRAATRLGMSQPAASRALARLRVLFSDAILVDGPGGYLLTARAEEMRPSLRNTLA 87 Query: 81 MSNLLLDKP-HHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQATIKLRNWDYDSLD 139 N LLD L ++ L + ++ P +++ + L+ Sbjct: 88 GVNELLDGRTFDPMRATGAVRLLMLDLEAAVLAPRLISSLAEQAPAVDLQVVSPGLRPLE 147 Query: 140 AITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPALHQTWNLDT 199 A+ VD ++ P I L+ D +R DHPA Q L Sbjct: 148 ALEADAVDAVIG----------VVDEAPAGIRKRKLYQDGFVTLMRADHPAAGQKLTLQR 197 Query: 200 FLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQPDNLLLATAPRY 259 FL H+ + + +D +L LGR+R + + +P F ++ +AA+ D L+ T P Sbjct: 198 FLELDHVVVSITGTGPAWVDEILARLGRQRRVKVRVPSFFAAVEIAARSD--LVITLPSS 255 Query: 260 CQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWLRETIKNLYASMA 319 + + + PL V +L WH RN P+ VWLR TI + + Sbjct: 256 LARTADMRRFVMTPPPLDL-------GSVVMSLAWHGRNQDAPRHVWLRRTIVTAVSDIG 308 >UniRef50_A8TNA4 Transcriptional regulator MexT n=1 Tax=alpha proteobacterium BAL199 RepID=A8TNA4_9PROT Length = 299 Score = 247 bits (632), Expect = 4e-64, Method: Composition-based stats. Identities = 68/315 (21%), Positives = 115/315 (36%), Gaps = 24/315 (7%) Query: 7 TLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTP 66 LDLNLL L+M+ERS+T+AA+R++V AVS +LA+LR+ D LFV S + PT Sbjct: 2 NLDLNLLRVFALVMRERSLTRAARRLSVGQPAVSHALARLRSELGDALFVRSGRRMEPTE 61 Query: 67 LMVSMEQNLAEWMQMSNLLLDKPHHQTP--RGLKFELAAESPLMMIMLNALSKQIYQRYP 124 S +A ++ + L P F + L M L +R P Sbjct: 62 WAKSFYAEIAPALERIDASLMSSRAFDPGSTDRTFRIGMSDDLQMAFLPQFLAAFTERMP 121 Query: 125 QATIKLRNWDYDS-LDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVW 183 A + ++ +Y + + + R +V + L +LP A + + Sbjct: 122 NARLVVQQTNYTTAAEMLDRRDVSLVVGY----------LDTLPAAAKTRTISRVSYRMI 171 Query: 184 LRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLF 243 + + + L + H + + +D LQ+ G R I +SL F + Sbjct: 172 MDSRN---AEVTTLADYCAGKHALVTFAGDLIGYVDETLQQRGVARDIRLSLSNFAVVPY 228 Query: 244 MAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPK 303 L+ L + LP E ++ W +P Sbjct: 229 ALRGTGY-LVTIPQYLAAVLANETGLVMAQLPFESP-------EFDVSMAWSPTVDSDPG 280 Query: 304 IVWLRETIKNLYASM 318 +R+ I + Sbjct: 281 ERIIRDLIVDTVGGF 295 >UniRef50_A6W2N0 Transcriptional regulator, LysR family n=1 Tax=Marinomonas sp. MWYL1 RepID=A6W2N0_MARMS Length = 310 Score = 247 bits (631), Expect = 4e-64, Method: Composition-based stats. Identities = 71/317 (22%), Positives = 134/317 (42%), Gaps = 19/317 (5%) Query: 4 SITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLS 63 S+ LDL L L L++ER+V +AA R+ ++ SA+S+ L +LR FDDPLF+ + G+ Sbjct: 5 SLQHLDLKSLTGLLYLLEERNVGRAADRLYLSQSAMSRLLNRLRDAFDDPLFIRTSKGMV 64 Query: 64 PTPLMVSMEQNLAEWMQMSNLL-LDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQR 122 PT +++E L ++ L + F + + A+++Q Y+ Sbjct: 65 PTSKALALEAPLKLMLEQLAGLWTESEFQPQSSYRTFRMQTTHYQAQAYMPAIAEQFYRE 124 Query: 123 YPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCV 182 P A+++ SL +D+ LP + + +L + Sbjct: 125 APFASLETSTLTETSLLNQAEHSLDLALCSDYI---------QLPNSFEKHLLGREKFRC 175 Query: 183 WLRKDHPAL-HQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQS 241 + +H + LD +L Y H+ + S+ D +L E RER A P + Sbjct: 176 VMSANHALAMKDSITLDDYLAYSHVLVNLGGSNPVISDALLGERARERHFAFRTPYMLAA 235 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 L + +LL++ + + + Q L + LP+ F + + W K ++ Sbjct: 236 LETVGRT-SLLMSNSGLLPERFQQQFGLVIKDLPMDFPF-------IHYYSSWPKSVEND 287 Query: 302 PKIVWLRETIKNLYASM 318 P ++W R+ + + + Sbjct: 288 PGVIWFRDICERVVKGL 304 >UniRef50_Q5E2I6 DNA-binding transcriptional activator n=65 Tax=Gammaproteobacteria RepID=Q5E2I6_VIBF1 Length = 323 Score = 247 bits (631), Expect = 5e-64, Method: Composition-based stats. Identities = 62/318 (19%), Positives = 123/318 (38%), Gaps = 22/318 (6%) Query: 2 KKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLG 61 ++ + +DLNLL +MQE+++T+AA+ + ++ AVS ++++L+ F+D LF+ G Sbjct: 15 EQILRGVDLNLLTVFDAVMQEQNITRAAQNLGMSQPAVSNAVSRLKLMFNDELFIRHGRG 74 Query: 62 LSPTPLMVSMEQNLAEWMQMS-NLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIY 120 + PT + + + +Q+ N L +F+L+ SP + + K I Sbjct: 75 IQPTQRARQLFAPMRQALQLVKNELPSSTFSPETSMRQFKLSICSPSDIRFAPRIMKDIQ 134 Query: 121 QRYPQATIKLR-NWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 + P ++KL + D + EVD + LF+D Sbjct: 135 NKAPHISLKLSGEHEPDIAQKLRYQEVDFVIDY----------VRFDEPGFMSTELFTDE 184 Query: 180 PCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFE 239 V +HP L N + H + D++ + E+ A Sbjct: 185 LVVVASVNHPRLQNGINKEQLASEKHAVPARIANTKGFADHLYVDSLYEQ--AYKGASIS 242 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 L++ +Q + + +A QL ++ LP+ + L WH Sbjct: 243 NILYVVSQSELITVA-PKWLVNSMPNRDQLMVLPLPIE-------SKGISGYLSWHDSYQ 294 Query: 300 HNPKIVWLRETIKNLYAS 317 + +W+R+ + + Sbjct: 295 KDKGHIWMRDQLMLICGE 312 >UniRef50_A8IJ97 Putative transcriptional regulator n=1 Tax=Azorhizobium caulinodans ORS 571 RepID=A8IJ97_AZOC5 Length = 324 Score = 247 bits (631), Expect = 5e-64, Method: Composition-based stats. Identities = 78/320 (24%), Positives = 124/320 (38%), Gaps = 23/320 (7%) Query: 3 KSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGL 62 I D LLL + LM T AA+R+ +T S VS +L +LR DPLF P GL Sbjct: 6 NHIRRFDGALLLVFRELMATGQTTAAARRLGLTQSTVSHALRRLRDLTGDPLFQRRPDGL 65 Query: 63 SPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPR--GLKFELAAESPLMMIMLNALSKQIY 120 +PTP + + E +++S L +P P F +A + ++ L+ + Sbjct: 66 TPTPRAHELLPIVVEMLRLSQALKGEPGEFDPAASTRHFRIAGPDIVSTVLAGPLAHRFA 125 Query: 121 QRYPQATIKL-RNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDV 179 Q P A + +L+A+ RGE+D+ S+P L+ + Sbjct: 126 QHAPNARLSFGFIVGAAALEALRRGEIDMAIG----------HFPSVPRGFAASTLWEEE 175 Query: 180 PCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFE 239 RK HP +L +L H+ + + T +D VLQ LG R + S P F Sbjct: 176 FVAIARKGHPRF-PPLDLAGYLAADHVLVSFSGRFTGVVDRVLQPLGLARRVVASFPLFL 234 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 AQ D + A C+ + + L + +P+ + Sbjct: 235 SVFDAVAQSDAVA-AVPYSLCERHAETFGLARLPMPIAVPGFPIVSVRRAGV-------- 285 Query: 300 HNPKIVWLRETIKNLYASMA 319 + WL I+ + A A Sbjct: 286 PDGGYEWLEALIRRMVAEYA 305 >UniRef50_B1LYW9 Transcriptional regulator, LysR family n=10 Tax=Rhizobiales RepID=B1LYW9_METRJ Length = 333 Score = 247 bits (631), Expect = 5e-64, Method: Composition-based stats. Identities = 79/299 (26%), Positives = 128/299 (42%), Gaps = 21/299 (7%) Query: 22 ERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSMEQNLAEWMQM 81 ERSVT+AA R+ + SA+S SLA+LR FDD L +P G+ PTP + + + L ++ Sbjct: 46 ERSVTRAAARVGIGQSAMSSSLARLRRLFDDELLTRAPDGMRPTPRALRIAEPLRSTLRQ 105 Query: 82 SNLLLDKPHHQTPRG--LKFELAAESPLMMIMLNALSKQIYQRYPQATIKLRNWDY-DSL 138 L+ + P F ++ + ++ L Q+ + P + LR+ D L Sbjct: 106 VQALVHREEQFDPATVARTFTVSLPDSVEALLGPRLIAQLRRDAPGIRLLLRSVDRTRIL 165 Query: 139 DAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPALHQTWNLD 198 D + VD+ L S L +L+ D V L LD Sbjct: 166 DELDADRVDLAIG----------LFSEGQLHHKQRLLYRDSYVVLFNAALIGLEPPIGLD 215 Query: 199 TFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQPDNLLLATAPR 258 +LR+PH+ ++ +D+ L +GR RT+A++ P F FM ++ R Sbjct: 216 DYLRFPHVLTSLRETAHGVVDDALALIGRSRTLAVTTPRFLVVPFMVRAA-PVIATMHAR 274 Query: 259 YCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWLRETIKNLYAS 317 + L + +P+P D +V ++LWH H+P WLRE + L Sbjct: 275 LATSFASALALSVSPVPVPLD-------DVSVSMLWHASYDHDPAHRWLRELLVRLAHE 326 >UniRef50_Q1GFT2 Transcriptional regulator, LysR family n=1 Tax=Ruegeria sp. TM1040 RepID=Q1GFT2_SILST Length = 299 Score = 246 bits (629), Expect = 9e-64, Method: Composition-based stats. Identities = 64/313 (20%), Positives = 121/313 (38%), Gaps = 21/313 (6%) Query: 8 LDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPL 67 +D++LL +M+ER+VT AA+R+ + S VS +LA+LR D LF+ + G+ PT Sbjct: 3 VDISLLRVFHAVMEERNVTAAARRLGQSQSTVSAALARLRDALGDELFLRARYGVEPTEK 62 Query: 68 MVSMEQNLAEWMQMSNLLLDKPHHQTP--RGLKFELAAESPLMMIMLNALSKQIYQRYPQ 125 + + ++A + P +F L +++ L++ Q P+ Sbjct: 63 ALQIAPDIAAGLDRLEQAFRAAEPFDPIRSTRRFRLLLGPYAEVVLAPDLAEAFAQHAPK 122 Query: 126 ATIKLRNWDYD-SLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWL 184 A ++L D + D+ P + LFSD + Sbjct: 123 AQLELAPIGPDLDPRKLAAQSFDLAIGRFAPP----------PDDLVVSDLFSDGFRCIV 172 Query: 185 RKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFM 244 + +LD + PH+ + + + G +R A+++ F + Sbjct: 173 APAALPEGASLDLDLYETLPHVIVAPPGRWRTGVHKLTAASGLQRNTAVAVSHFLTAAPT 232 Query: 245 AAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKI 304 A+ + + R + L VA+P + P + WH +P+ Sbjct: 233 VARINGIA-TVPARIAAMVAAPYGLRNVAVP-------RDLGTFPTQIAWHPHQRRDPRH 284 Query: 305 VWLRETIKNLYAS 317 VWLR+ + +L A+ Sbjct: 285 VWLRDLLLSLTAT 297 >UniRef50_C5CV67 Transcriptional regulator, LysR family n=1 Tax=Variovorax paradoxus S110 RepID=C5CV67_VARPS Length = 300 Score = 246 bits (628), Expect = 9e-64, Method: Composition-based stats. Identities = 72/314 (22%), Positives = 117/314 (37%), Gaps = 24/314 (7%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 ++ +DLNLL L LM+ER V++AA+R+++ AVS +LA+LR DPL V + P Sbjct: 6 LSRIDLNLLTVLAALMRERHVSRAAQRLHLGQPAVSHALARLRELTGDPLLVRQGRVMEP 65 Query: 65 TPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGL--KFELAAESPLMMIMLNALSKQIYQR 122 T +++ Q L ++ P F + L + ML L + + Sbjct: 66 TERALALMQGLGPALEQIEATFRAQADFEPARAAPVFRIGLTDDLQIAMLPRLLRALSVE 125 Query: 123 YPQATIKLRNWDYDSLDA-ITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPC 181 P+A + Y + + G+V L LP + + Sbjct: 126 APRARLVTLTVCYRNAARYLDEGQV----------SAVMTFLKDLPAGAKIRKVRTARFA 175 Query: 182 VWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQS 241 + R D LD + R H+ + + +D L ELGR+R +A S+P+F Sbjct: 176 LL-RAD--TAAARLTLDDYCRRRHVLVTYAGDLCGTVDETLNELGRQREVAFSVPQFGSL 232 Query: 242 LFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHN 301 + A + LL + L ALP L W + Sbjct: 233 PAVLAGTE-LLATVPEHVALALSAQGGLRCEALPFESP-------SYQIKLAWRAVTDKD 284 Query: 302 PKIVWLRETIKNLY 315 WLR + + Sbjct: 285 AAETWLRRAMLRAF 298 >UniRef50_A8H854 Transcriptional regulator, LysR family n=1 Tax=Shewanella pealeana ATCC 700345 RepID=A8H854_SHEPA Length = 303 Score = 246 bits (628), Expect = 9e-64, Method: Composition-based stats. Identities = 75/318 (23%), Positives = 141/318 (44%), Gaps = 23/318 (7%) Query: 5 ITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSP 64 ++ LDLNLL ++L++ ++ KAA+ ++++ AVS++L +LR +F D LFV S GL P Sbjct: 1 MSQLDLNLLKVFRVLIEVKNTRKAAEILHLSQPAVSRALRRLRDYFGDELFVRSAHGLEP 60 Query: 65 TPLMVSMEQNLAEWMQMSNLLLDKPHHQTPR--GLKFELAAESPLMMIMLNALSKQIYQR 122 T + + L E M L+ P+ K +A + ++ L K + ++ Sbjct: 61 TSKALVIGSRLPEAMDQLFEALNVKEEFEPQFYSGKVTIAVNGFIAHWLVPPLIKALTEK 120 Query: 123 YPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCV 182 P I + NW+ + D I GE+ + + L + E L SD V Sbjct: 121 APNMEIYMANWEESTSDKIINGEIQLAINYFPL---------ELTKQLIQEKLGSDDFVV 171 Query: 183 WLRKDHPALHQTWNLDTFLRYP---HISICWEQSDTWALDNVLQELGRERTIAMSLPEFE 239 RKDHP + + F +YP HI W ++ + ++ L++LG + + +S + Sbjct: 172 LCRKDHPFQKEVIGAEDFPKYPLASHIVPGWNETKNFTVE-ALKKLGYKPRVQLSSSKMN 230 Query: 240 QSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNS 299 L D LL + + + + ++ + ++ F L++ ++ Sbjct: 231 IILSSLELTDMLLPC-SKLLAKTLSD--RFRIIDIDPELEQPSS-----DFALIYANKSR 282 Query: 300 HNPKIVWLRETIKNLYAS 317 NP WL++ + + S Sbjct: 283 RNPLDEWLQQCVIDCVNS 300 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.316 0.182 0.586 Lambda K H 0.267 0.0557 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 2,362,209,087 Number of Sequences: 3077464 Number of extensions: 130802567 Number of successful extensions: 405816 Number of sequences better than 1.0e-01: 250 Number of HSP's better than 0.1 without gapping: 15873 Number of HSP's successfully gapped in prelim test: 1063 Number of HSP's that attempted gapping in prelim test: 367853 Number of HSP's gapped (non-prelim): 17717 length of query: 319 length of database: 1,040,396,356 effective HSP length: 128 effective length of query: 191 effective length of database: 646,480,964 effective search space: 123477864124 effective search space used: 123477864124 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.2 bits) S2: 94 (40.4 bits)