BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (940 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_P0A196 UvrABC system protein A n=175 Tax=Bacteria RepID... 1882 0.0 UniRef50_Q8ZJ07 UvrABC system protein A n=84 Tax=Bacteria RepID=... 1764 0.0 UniRef50_P44410 UvrABC system protein A n=133 Tax=cellular organ... 1593 0.0 UniRef50_Q88QK7 UvrABC system protein A n=91 Tax=cellular organi... 1500 0.0 UniRef50_Q87BK9 UvrABC system protein A n=247 Tax=cellular organ... 1379 0.0 UniRef50_A5WGZ4 Excinuclease ABC subunit A n=24 Tax=Bacteria Rep... 1283 0.0 UniRef50_Q21RX9 Excinuclease ABC subunit A n=19 Tax=Bacteria Rep... 1238 0.0 UniRef50_O31151 UvrABC system protein A n=81 Tax=Bacteria RepID=... 1168 0.0 UniRef50_A8ID62 Excinuclease ABC A subunit n=66 Tax=Bacteria Rep... 1155 0.0 UniRef50_Q8ENJ6 UvrABC system protein A n=258 Tax=cellular organ... 1149 0.0 UniRef50_C9KNX7 Excinuclease ABC subunit A n=2 Tax=Bacteria RepI... 1137 0.0 UniRef50_Q2YPX5 UvrABC system protein A n=164 Tax=root RepID=UVR... 1132 0.0 UniRef50_Q5HHQ9 UvrABC system protein A n=172 Tax=cellular organ... 1126 0.0 UniRef50_Q8UF86 UvrABC system protein A n=78 Tax=cellular organi... 1114 0.0 UniRef50_O26543 UvrABC system protein A n=86 Tax=cellular organi... 1104 0.0 UniRef50_Q71WU0 UvrABC system protein A n=44 Tax=Bacteria RepID=... 1100 0.0 UniRef50_Q56242 UvrABC system protein A n=60 Tax=cellular organi... 1098 0.0 UniRef50_C7N595 Excinuclease ABC subunit A n=57 Tax=Bacteria Rep... 1076 0.0 UniRef50_D2RIL7 Excinuclease ABC, A subunit n=3 Tax=Bacteria Rep... 1072 0.0 UniRef50_Q46577 UvrABC system protein A n=5 Tax=Bacteria RepID=U... 1063 0.0 UniRef50_P63381 UvrABC system protein A n=53 Tax=Bacteria RepID=... 1055 0.0 UniRef50_A2C5J2 Excinuclease ABC, A subunit, ATP/GTP-binding sit... 1054 0.0 UniRef50_P63385 UvrABC system protein A n=172 Tax=cellular organ... 1053 0.0 UniRef50_A7NS89 Excinuclease ABC, A subunit n=3 Tax=Bacteria Rep... 1047 0.0 UniRef50_O66911 UvrABC system protein A n=11 Tax=cellular organi... 1038 0.0 UniRef50_D0MK77 Excinuclease ABC, A subunit n=2 Tax=Bacteroidete... 998 0.0 UniRef50_D2QY36 Excinuclease ABC, A subunit n=1 Tax=Pirellula st... 994 0.0 UniRef50_Q9WYV0 UvrABC system protein A n=8 Tax=Bacteria RepID=U... 985 0.0 UniRef50_A6DP81 Excinuclease ABC, A subunit n=3 Tax=Bacteria Rep... 969 0.0 UniRef50_P47660 UvrABC system protein A n=6 Tax=Bacteria RepID=U... 953 0.0 UniRef50_D0LQB5 Excinuclease ABC, A subunit n=1 Tax=Haliangium o... 938 0.0 UniRef50_C1ZII9 UvrA family protein n=39 Tax=Bacteria RepID=C1ZI... 938 0.0 UniRef50_Q2SR90 Excinuclease ABC, A subunit n=5 Tax=Bacteria Rep... 934 0.0 UniRef50_D1PT12 Excision endonuclease subunit UvrA n=3 Tax=Bacte... 923 0.0 UniRef50_Q2RZZ5 Excinuclease ABC, A subunit n=1 Tax=Salinibacter... 920 0.0 UniRef50_Q83NI8 Excinuclease ABC subunit A n=2 Tax=Tropheryma wh... 919 0.0 UniRef50_Q30YG3 Excinuclease ABC subunit A n=3 Tax=Bacteria RepI... 914 0.0 UniRef50_Q2NJE0 Excinuclease ABC subunit A n=3 Tax=Candidatus Ph... 909 0.0 UniRef50_Q1MP46 Excinuclease ABC, A subunit n=2 Tax=Bacteria Rep... 906 0.0 UniRef50_B6YRR0 Excinuclease ABC subunit A n=1 Tax=Candidatus Az... 900 0.0 UniRef50_C0QY85 Exinuclease ABC subunit A n=6 Tax=Bacteria RepID... 897 0.0 UniRef50_Q30RE0 Excinuclease ABC subunit A n=21 Tax=Campylobacte... 891 0.0 UniRef50_C2NRS3 Excinuclease ABC, A subunit n=2 Tax=Bacillus cer... 875 0.0 UniRef50_B6WY93 Putative uncharacterized protein n=1 Tax=Desulfo... 875 0.0 UniRef50_B8DJB0 Excinuclease ABC, A subunit n=2 Tax=Desulfovibri... 871 0.0 UniRef50_Q01SK3 Excinuclease ABC subunit A n=20 Tax=Bacteria Rep... 846 0.0 UniRef50_Q6SI25 Excinuclease ABC, A subunit n=1 Tax=uncultured m... 845 0.0 UniRef50_B5JM86 Excinuclease ABC, A subunit n=1 Tax=Verrucomicro... 844 0.0 UniRef50_Q027K1 Excinuclease ABC subunit A n=2 Tax=Bacteria RepI... 842 0.0 UniRef50_C0ABC8 Excinuclease ABC, A subunit n=1 Tax=Opitutaceae ... 842 0.0 UniRef50_B3DYB1 Excinuclease ABC subunit A, ATPase n=4 Tax=Bacte... 829 0.0 UniRef50_C1F8N8 Excinuclease ABC, A subunit n=1 Tax=Acidobacteri... 823 0.0 UniRef50_B8I0Z8 Excinuclease ABC, A subunit n=1 Tax=Clostridium ... 816 0.0 UniRef50_B3QT58 Excinuclease ABC, A subunit n=23 Tax=Bacteroidet... 815 0.0 UniRef50_Q1PVF8 Strongly similar to exinuclease ABC, protein A n... 810 0.0 UniRef50_Q2S5D7 Excinuclease ABC, A subunit n=3 Tax=Bacteria Rep... 796 0.0 UniRef50_C1A9P0 UvrABC system protein A n=1 Tax=Gemmatimonas aur... 793 0.0 UniRef50_B1ZMZ6 Excinuclease ABC, A subunit n=1 Tax=Opitutus ter... 793 0.0 UniRef50_A0LG77 UvrA family protein n=1 Tax=Syntrophobacter fuma... 758 0.0 UniRef50_Q3B5F8 Excinuclease ABC subunit A n=11 Tax=Chlorobiacea... 755 0.0 UniRef50_C9PZ01 Excision endonuclease subunit UvrA n=8 Tax=Bacte... 748 0.0 UniRef50_Q6MRC9 Excinuclease ABC subunit A n=1 Tax=Bdellovibrio ... 738 0.0 UniRef50_B2RMJ8 Excinuclease ABC A subunit n=30 Tax=Bacteria Rep... 728 0.0 UniRef50_A3ZSW8 Excinuclease ABC subunit A n=1 Tax=Blastopirellu... 728 0.0 UniRef50_C2M987 Excinuclease ABC subunit A n=1 Tax=Porphyromonas... 721 0.0 UniRef50_C6VXN3 Excinuclease ABC, A subunit n=3 Tax=Bacteroidete... 720 0.0 UniRef50_D2QFW0 Excinuclease ABC, A subunit n=2 Tax=Bacteroidete... 716 0.0 UniRef50_D2R1K2 Excinuclease ABC, A subunit n=1 Tax=Pirellula st... 689 0.0 UniRef50_B5YG61 Excinuclease ABC, A subunit n=1 Tax=Thermodesulf... 681 0.0 UniRef50_Q0A6L0 Excinuclease ABC, A subunit n=4 Tax=Bacteria Rep... 670 0.0 UniRef50_B2UPV5 Excinuclease ABC, A subunit n=5 Tax=Bacteria Rep... 664 0.0 UniRef50_Q6MBT0 Putative excinuclease ABC chain A n=1 Tax=Candid... 664 0.0 UniRef50_C7I293 Excinuclease ABC, A subunit n=1 Tax=Thiomonas in... 661 0.0 UniRef50_A4BKX6 Excinuclease ABC, A subunit n=4 Tax=Proteobacter... 655 0.0 UniRef50_B8GRH5 Excinuclease ABC, A subunit n=10 Tax=Bacteria Re... 644 0.0 UniRef50_C4RNF2 Excinuclease ABC, A subunit n=1 Tax=Micromonospo... 644 0.0 UniRef50_Q7URK7 Excinuclease ABC subunit A n=1 Tax=Rhodopirellul... 637 0.0 UniRef50_A1WZ98 UvrA family protein n=2 Tax=Proteobacteria RepID... 637 0.0 UniRef50_A9G6R8 Excinuclease ABC subunit A n=1 Tax=Sorangium cel... 632 e-179 UniRef50_B5JNR8 Excinuclease ABC, A subunit, putative n=1 Tax=Ve... 632 e-179 UniRef50_B9XQK9 Excinuclease ABC, A subunit n=3 Tax=Bacteria Rep... 631 e-179 UniRef50_Q21RT9 UvrA family protein n=4 Tax=Bacteria RepID=Q21RT... 626 e-177 UniRef50_Q0W0L7 Excinuclease ABC, ATPase subunit n=3 Tax=cellula... 626 e-177 UniRef50_Q124L1 UvrA family protein n=23 Tax=cellular organisms ... 624 e-177 UniRef50_B6W740 Putative uncharacterized protein n=1 Tax=Anaeroc... 623 e-176 UniRef50_B1XYK7 Excinuclease ABC, A subunit n=2 Tax=Burkholderia... 621 e-176 UniRef50_Q6MKF2 Excinuclease ABC subunit A n=1 Tax=Bdellovibrio ... 617 e-175 UniRef50_B3DZR5 Excinuclease ABC subunit A, ATPase n=1 Tax=Methy... 615 e-174 UniRef50_C0ADS9 Excinuclease ABC, A subunit n=1 Tax=Opitutaceae ... 612 e-173 UniRef50_B1ZV20 Excinuclease ABC, A subunit n=5 Tax=Bacteria Rep... 609 e-172 UniRef50_Q1D9R5 UvrABC system, A protein n=2 Tax=Cystobacterinea... 606 e-171 UniRef50_B5YKV1 Excinuclease ABC, A subunit n=1 Tax=Thermodesulf... 597 e-169 UniRef50_Q2T972 Excinuclease ABC, subunit A, form 2 n=56 Tax=Bac... 595 e-168 UniRef50_D0LX97 Excinuclease ABC, A subunit n=1 Tax=Haliangium o... 577 e-163 UniRef50_Q9Z985 UvrABC system protein A n=5 Tax=Chlamydophila Re... 570 e-160 UniRef50_A0LIN7 Excinuclease ABC subunit A n=1 Tax=Syntrophobact... 555 e-156 UniRef50_Q9PK60 UvrABC system protein A n=10 Tax=Chlamydia RepID... 554 e-156 UniRef50_Q18CU1 Putative DNA repair protein n=6 Tax=Clostridium ... 553 e-155 UniRef50_B4V5Y5 Excinuclease ABC subunit A n=1 Tax=Streptomyces ... 530 e-149 UniRef50_A1SWH0 Excinuclease ABC, A subunit n=15 Tax=Bacteria Re... 528 e-148 UniRef50_B6A038 Excinuclease ABC, A subunit n=8 Tax=Bacteria Rep... 528 e-148 UniRef50_Q7UK42 Excinuclease ABC subunit A n=1 Tax=Rhodopirellul... 525 e-147 UniRef50_A8MGE0 Excinuclease ABC, A subunit n=1 Tax=Alkaliphilus... 523 e-146 UniRef50_D1BHG7 Excinuclease ABC, A subunit n=1 Tax=Sanguibacter... 520 e-146 UniRef50_Q9RCZ2 Putative excinuclease ABC subunit A n=3 Tax=Stre... 513 e-143 UniRef50_B1L257 Excinuclease ABC, A subunit n=1 Tax=Clostridium ... 509 e-142 UniRef50_A6TUU6 ABC transporter related n=1 Tax=Alkaliphilus met... 508 e-142 UniRef50_C8VVR7 ABC transporter related n=1 Tax=Desulfotomaculum... 506 e-141 UniRef50_B8FST5 ABC transporter related n=5 Tax=Firmicutes RepID... 503 e-140 UniRef50_Q5WJS0 Excinuclease ABC subunit A n=38 Tax=cellular org... 501 e-140 UniRef50_C4ZKV2 Excinuclease ABC, A subunit n=1 Tax=Thauera sp. ... 497 e-138 UniRef50_D2AS77 Excinuclease ABC subunit A n=1 Tax=Streptosporan... 496 e-138 UniRef50_A9U6S5 Predicted protein (Fragment) n=6 Tax=cellular or... 495 e-138 UniRef50_A5LJ87 Excinuclease ABC subunit A n=13 Tax=Bacilli RepI... 494 e-138 UniRef50_C3RJK4 Excinuclease ABC subunit A n=2 Tax=Bacteria RepI... 491 e-137 UniRef50_B2T6A1 Excinuclease ABC, A subunit n=34 Tax=Bacteria Re... 486 e-135 UniRef50_C7FPB9 Excinuclease ATPase subunit n=1 Tax=uncultured b... 486 e-135 UniRef50_B2UL01 Excinuclease ABC, A subunit n=1 Tax=Akkermansia ... 484 e-135 UniRef50_A6BZF4 Excinuclease ABC subunit A n=1 Tax=Planctomyces ... 483 e-134 UniRef50_D2ATA6 Excinuclease ABC, A subunit n=4 Tax=Actinomyceta... 483 e-134 UniRef50_B1KRA3 ABC transporter related n=1 Tax=Shewanella woody... 471 e-131 UniRef50_A1TP16 Excinuclease ABC, A subunit n=4 Tax=Bacteria Rep... 462 e-128 UniRef50_D1JG21 Putative uncharacterized protein n=1 Tax=uncultu... 462 e-128 UniRef50_C9YE98 Putative uncharacterized protein n=1 Tax=Curviba... 456 e-126 UniRef50_C9XKB3 Putative antibiotic resistance ABC transporter, ... 455 e-126 UniRef50_A6CCN1 Excinuclease ABC subunit A n=1 Tax=Planctomyces ... 455 e-126 UniRef50_C6R915 UvrABC system protein A n=2 Tax=Corynebacterium ... 440 e-121 UniRef50_Q041B5 Excinuclease ATPase subunit n=53 Tax=Lactobacill... 436 e-120 UniRef50_C4DT53 Excinuclease ATPase subunit n=3 Tax=Bacteria Rep... 432 e-119 UniRef50_C3PKK6 Excinuclease ABC, subunit A n=10 Tax=Actinomycet... 431 e-119 UniRef50_B1KWH8 Excinuclease ABC, A subunit n=7 Tax=Clostridium ... 423 e-116 UniRef50_UPI00019058DE excinuclease ABC subunit A n=1 Tax=Rhizob... 422 e-116 UniRef50_C2HBQ4 Excinuclease subunit A n=4 Tax=Enterococcus faec... 414 e-113 UniRef50_C2ENC0 Excinuclease subunit A n=1 Tax=Lactobacillus ult... 411 e-113 UniRef50_B1VG20 Excinuclease ABC, subunit A n=2 Tax=Actinomyceta... 411 e-113 UniRef50_Q039P8 Excinuclease ATPase subunit n=56 Tax=Bacteria Re... 410 e-112 UniRef50_C1B8F2 UvrA-like protein n=57 Tax=Bacteria RepID=C1B8F2... 408 e-112 UniRef50_D1AQT8 ABC transporter related protein n=1 Tax=Sebaldel... 400 e-109 UniRef50_C0VYB5 Excinuclease subunit A n=1 Tax=Actinomyces coleo... 399 e-109 UniRef50_UPI00004C267E COG0178: Excinuclease ATPase subunit n=1 ... 397 e-108 UniRef50_C7NL29 Excinuclease ATPase subunit n=1 Tax=Kytococcus s... 395 e-108 UniRef50_C7PP78 ABC transporter related n=6 Tax=Bacteria RepID=C... 394 e-107 UniRef50_A1SIJ3 ABC transporter related n=10 Tax=Bacteria RepID=... 389 e-106 UniRef50_A6VRX7 ABC transporter related n=4 Tax=Bacteria RepID=A... 389 e-106 UniRef50_C5C6C3 ABC transporter related n=3 Tax=Actinomycetales ... 388 e-106 UniRef50_D2Q2S9 ABC transporter related protein n=6 Tax=Bacteria... 380 e-103 UniRef50_B8I5E2 ABC transporter related n=4 Tax=Clostridium RepI... 379 e-103 UniRef50_A6VPU1 ABC transporter related n=1 Tax=Actinobacillus s... 375 e-102 UniRef50_C8PNC0 UvrABC system protein A n=4 Tax=cellular organis... 366 3e-99 UniRef50_B9XUD5 Putative uncharacterized protein n=2 Tax=Helicob... 365 4e-99 UniRef50_C1ZJW2 Excinuclease ATPase subunit n=1 Tax=Planctomyces... 362 5e-98 UniRef50_Q49WT2 Excinuclease ATPase subunit n=16 Tax=Staphylococ... 359 3e-97 UniRef50_Q6A9D4 UvrA-like ABC transporter n=2 Tax=Propionibacter... 353 2e-95 UniRef50_B4CXL9 ABC transporter-related protein n=1 Tax=Chthonio... 352 3e-95 UniRef50_UPI0001BC2CF0 putative excinuclease ABC subunit A n=1 T... 342 3e-92 UniRef50_C8NMU6 Excinuclease ABC, A subunit n=91 Tax=Bacteria Re... 336 2e-90 UniRef50_B7GTR5 ABC transporter related n=26 Tax=Bacteria RepID=... 334 1e-89 UniRef50_A0M2R3 UvrABC system protein A-like n=1 Tax=Gramella fo... 326 3e-87 UniRef50_UPI0001B5406F UvrA-like protein n=1 Tax=Streptomyces sp... 323 2e-86 UniRef50_P52087 UvrABC system protein A (Fragment) n=44 Tax=Bact... 322 3e-86 UniRef50_C9RLN7 ABC transporter related protein n=1 Tax=Fibrobac... 306 3e-81 UniRef50_B3SEI3 Putative uncharacterized protein (Fragment) n=1 ... 297 1e-78 UniRef50_Q92AV6 Lin1813 protein n=1 Tax=Listeria innocua RepID=Q... 290 2e-76 UniRef50_Q4JUN2 Excinuclease ABC, subunit A n=2 Tax=Corynebacter... 284 1e-74 UniRef50_B6W739 Putative uncharacterized protein n=1 Tax=Anaeroc... 261 9e-68 UniRef50_C1ZCR5 Excinuclease ATPase subunit n=1 Tax=Planctomyces... 252 4e-65 UniRef50_UPI00019113E5 excinuclease ABC subunit A n=2 Tax=Salmon... 241 1e-61 UniRef50_C6CND4 ABC transporter related n=1 Tax=Dickeya zeae Ech... 208 7e-52 UniRef50_A2V167 ABC transporter related n=1 Tax=Shewanella putre... 197 1e-48 UniRef50_C9RP94 Excinuclease ATPase subunit-like protein n=1 Tax... 171 2e-40 UniRef50_A7BNZ1 Excinuclease ABC subunit A n=1 Tax=Beggiatoa sp.... 147 2e-33 UniRef50_A9VGN1 ABC transporter related n=62 Tax=Bacillaceae Rep... 124 3e-26 UniRef50_D1ZX13 C-terminus not complete (Fragment) n=1 Tax=Sorda... 123 3e-26 UniRef50_C3PL69 Putative ABC transport system n=1 Tax=Corynebact... 118 1e-24 UniRef50_UPI00016998C1 hypothetical protein Epers_17394 n=1 Tax=... 118 1e-24 UniRef50_D0VX13 Geobacillus stearothermophilus UvrA interaction ... 112 9e-23 UniRef50_A8PN67 Excinuclease ABC, A subunit, putative n=1 Tax=Br... 94 4e-17 UniRef50_B9Y318 Putative uncharacterized protein (Fragment) n=1 ... 88 1e-15 UniRef50_C0W4B4 Putative uncharacterized protein n=1 Tax=Actinom... 83 4e-14 UniRef50_C8VY85 Beta-lactamase n=3 Tax=Clostridiales RepID=C8VY8... 81 2e-13 UniRef50_UPI00017435C2 excinuclease ABC subunit A (UvrA) n=1 Tax... 73 5e-11 UniRef50_C0XR98 Possible excinuclease ABC, subunit A n=1 Tax=Cor... 72 7e-11 UniRef50_UPI00018540DA excinuclease ABC subunit A n=1 Tax=Helico... 67 2e-09 UniRef50_C2CQ71 Putative uncharacterized protein n=1 Tax=Coryneb... 67 3e-09 UniRef50_UPI00016931CA Excinuclease ATPase subunit n=1 Tax=Paeni... 65 1e-08 UniRef50_C8W1V3 ABC transporter related n=1 Tax=Desulfotomaculum... 63 5e-08 UniRef50_Q02DK9 Zinc import ATP-binding protein znuC n=178 Tax=P... 63 6e-08 UniRef50_Q28MT7 ABC transporter related n=1 Tax=Jannaschia sp. C... 63 7e-08 UniRef50_D0L9T7 ABC transporter related protein n=3 Tax=Coryneba... 62 1e-07 UniRef50_B8H6T0 ABC transporter related n=26 Tax=Actinobacteria ... 62 1e-07 UniRef50_A9BQS1 ABC transporter related n=8 Tax=Proteobacteria R... 62 1e-07 UniRef50_D2RY14 ABC transporter related protein n=2 Tax=Halobact... 62 1e-07 UniRef50_C6QB88 ABC transporter related protein n=9 Tax=Proteoba... 61 2e-07 UniRef50_UPI0001854C6C excinuclease ABC subunit A n=1 Tax=Helico... 61 2e-07 UniRef50_B4SQQ9 ABC transporter related n=7 Tax=Bacteria RepID=B... 61 2e-07 UniRef50_Q5YXV6 Putative ABC transporter ATP-binding protein n=1... 61 2e-07 UniRef50_Q4L6Q6 MreA protein n=7 Tax=Bacillales RepID=Q4L6Q6_STAHJ 61 2e-07 UniRef50_Q5WD41 Multidrug ABC transporter ATP-binding protein n=... 61 2e-07 UniRef50_A0JU30 ABC transporter related n=15 Tax=Actinobacteria ... 60 3e-07 UniRef50_D1XHZ3 ABC transporter related protein n=1 Tax=Streptom... 60 3e-07 UniRef50_B8FQG8 ABC transporter related n=17 Tax=Firmicutes RepI... 60 4e-07 UniRef50_D0LDS7 ABC transporter related protein n=6 Tax=Coryneba... 60 5e-07 UniRef50_A9KLL1 ABC transporter related n=1 Tax=Clostridium phyt... 60 5e-07 UniRef50_C5C220 ABC transporter related n=2 Tax=Actinobacteria (... 60 5e-07 UniRef50_A9NFI8 ABC-type transport system, ATP-binding component... 60 5e-07 UniRef50_Q7WNN2 Probable ATP-binding component of ABC transporte... 60 5e-07 UniRef50_B1ZTE6 ABC transporter related n=1 Tax=Opitutus terrae ... 60 6e-07 UniRef50_Q89VJ1 ABC transporter ATP-binding protein n=3 Tax=Brad... 60 6e-07 UniRef50_A0K1S0 ABC transporter related n=2 Tax=Arthrobacter Rep... 59 7e-07 UniRef50_A6NWF5 Putative uncharacterized protein n=1 Tax=Bactero... 59 7e-07 UniRef50_C5D6I7 ABC transporter related n=1 Tax=Geobacillus sp. ... 59 7e-07 UniRef50_Q9KD30 Manganese transport system ATP-binding protein m... 59 7e-07 UniRef50_D1AWW4 ABC transporter related protein n=9 Tax=Fusobact... 59 7e-07 UniRef50_B1L6P9 ABC-type cobalt transport system, ATPase compone... 59 8e-07 UniRef50_Q0BAD9 ABC transporter related n=3 Tax=Burkholderia Rep... 59 9e-07 UniRef50_C1A5G1 Putative ABC transporter ATP-binding protein n=1... 59 9e-07 UniRef50_C7QHV5 FHA modulated ABC efflux pump with fused ATPase ... 59 1e-06 UniRef50_Q89GD6 ABC transporter ATP-binding protein n=1 Tax=Brad... 59 1e-06 UniRef50_B1VA43 ABC-type Zn/Mn transport system, ATPase componen... 59 1e-06 UniRef50_Q56953 Chelated iron transport system membrane protein ... 59 1e-06 UniRef50_A0QSY1 ABC transporter, ATP-binding protein n=61 Tax=My... 59 1e-06 UniRef50_O26254 Methyl coenzyme M reductase system, component A2... 59 1e-06 UniRef50_C7NPH8 ABC transporter related n=1 Tax=Halorhabdus utah... 58 1e-06 UniRef50_Q88RL1 Zinc import ATP-binding protein znuC n=51 Tax=Ga... 58 1e-06 UniRef50_C3PKN6 Putative ABC transport system, ATP-binding prote... 58 1e-06 UniRef50_B5J4J2 ABC transporter, ATP-binding protein, putative n... 58 1e-06 UniRef50_A8L5Z0 FHA modulated ABC efflux pump with fused ATPase ... 58 1e-06 UniRef50_Q79ZU1 MWP018 protein n=32 Tax=Staphylococcus aureus Re... 58 2e-06 UniRef50_A8L9L7 ABC transporter related n=3 Tax=Actinomycetales ... 58 2e-06 UniRef50_D2NPP9 ABC-type hemin transport system, ATPase componen... 58 2e-06 UniRef50_D2Q323 ABC transporter related protein n=1 Tax=Kribbell... 58 2e-06 UniRef50_C7PWJ0 ABC transporter related n=1 Tax=Catenulispora ac... 58 2e-06 UniRef50_Q73JF3 ABC transporter, ATP-binding protein n=2 Tax=Bac... 58 2e-06 UniRef50_A8AVH3 ATP binding protein of ABC transporter n=2 Tax=S... 58 2e-06 UniRef50_B8DI09 Macrolide export ATP-binding/permease protein Ma... 58 2e-06 UniRef50_Q08JN4 AatC, ATP binding protein of ABC transporter n=6... 58 2e-06 UniRef50_C4G5D3 Putative uncharacterized protein n=1 Tax=Abiotro... 58 2e-06 UniRef50_A8L1Y4 FHA modulated ABC efflux pump with fused ATPase ... 58 2e-06 UniRef50_A7MK51 Putative uncharacterized protein n=1 Tax=Cronoba... 58 2e-06 UniRef50_Q8PY26 Putative ABC transporter ATP-binding protein MM_... 57 2e-06 UniRef50_UPI0000382FFE COG4559: ABC-type hemin transport system,... 57 3e-06 UniRef50_C0RL02 ABC transporter related protein n=27 Tax=Proteob... 57 3e-06 UniRef50_D2SCY4 ABC transporter related protein n=2 Tax=Actinomy... 57 3e-06 UniRef50_B8C0B8 ABC transporter n=1 Tax=Thalassiosira pseudonana... 57 3e-06 UniRef50_Q12UN3 ABC transporter ATPase subunit n=1 Tax=Methanoco... 57 3e-06 UniRef50_C0W300 ABC superfamily ATP binding cassette transporter... 57 3e-06 UniRef50_D1XB93 ABC transporter related protein n=6 Tax=Streptom... 57 3e-06 UniRef50_C4FAN6 Putative uncharacterized protein n=1 Tax=Collins... 57 3e-06 UniRef50_A9WBR9 ABC transporter related n=4 Tax=Chloroflexi (cla... 57 3e-06 UniRef50_C7Q6Y6 FHA modulated ABC efflux pump with fused ATPase ... 57 3e-06 >UniRef50_P0A196 UvrABC system protein A n=175 Tax=Bacteria RepID=UVRA_SALTI Length = 941 Score = 1882 bits (4875), Expect = 0.0, Method: Compositional matrix adjust. Identities = 920/940 (97%), Positives = 936/940 (99%) Query: 1 MDKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAY 60 MDKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAY Sbjct: 1 MDKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAY 60 Query: 61 ARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRC 120 ARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRC Sbjct: 61 ARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRC 120 Query: 121 PDHDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARID 180 PDHDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARID Sbjct: 121 PDHDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARID 180 Query: 181 GEVCDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVADMDDP 240 GEVCDLSDPPKLELQKKHTIEVV+DRFKVR+DL+QRLAESFETALELSGGTAVVADMDD Sbjct: 181 GEVCDLSDPPKLELQKKHTIEVVIDRFKVRNDLSQRLAESFETALELSGGTAVVADMDDE 240 Query: 241 KAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPEL 300 KAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNP+L Sbjct: 241 KAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPDL 300 Query: 301 SLAGGAIRGWDRRNFYYFQMLKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKENIEFKY 360 SLAGGAIRGWDRRNFYYFQMLKSLA+HYKFDV+APW SLSANVHKVVLYGSGKENIEFKY Sbjct: 301 SLAGGAIRGWDRRNFYYFQMLKSLAEHYKFDVDAPWASLSANVHKVVLYGSGKENIEFKY 360 Query: 361 MNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGTRLRREARH 420 MNDRGDTS+RRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGTRL REARH Sbjct: 361 MNDRGDTSVRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGTRLNREARH 420 Query: 421 VYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTL 480 V+VENTPLPAISDMSIGHAM+FF NLKL+GQRAKIAEK+LKEIGDRLKFLVNVGLNYLTL Sbjct: 421 VFVENTPLPAISDMSIGHAMDFFTNLKLSGQRAKIAEKVLKEIGDRLKFLVNVGLNYLTL 480 Query: 481 SRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNT 540 SRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLR+LGNT Sbjct: 481 SRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRNLGNT 540 Query: 541 VIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEV 600 VIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEV Sbjct: 541 VIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEV 600 Query: 601 PKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQR 660 PK+RVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQR Sbjct: 601 PKQRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQR 660 Query: 661 QLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPE 720 QLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPE Sbjct: 661 QLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPE 720 Query: 721 SRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKY 780 SR+RGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKY Sbjct: 721 SRSRGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKY 780 Query: 781 KGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKL 840 KGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKL Sbjct: 781 KGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKL 840 Query: 841 ARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADW 900 ARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLH+LRDQGNTIVVIEHNLDVIKTADW Sbjct: 841 ARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHQLRDQGNTIVVIEHNLDVIKTADW 900 Query: 901 IVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLKPML 940 IVDLGPEGGSGGGEILV+GTPETVAECEASHTARFLKPML Sbjct: 901 IVDLGPEGGSGGGEILVAGTPETVAECEASHTARFLKPML 940 >UniRef50_Q8ZJ07 UvrABC system protein A n=84 Tax=Bacteria RepID=UVRA_YERPE Length = 947 Score = 1764 bits (4570), Expect = 0.0, Method: Compositional matrix adjust. Identities = 854/940 (90%), Positives = 903/940 (96%) Query: 1 MDKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAY 60 MD IEVRGARTHNLKNINL+IPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAY Sbjct: 1 MDNIEVRGARTHNLKNINLIIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAY 60 Query: 61 ARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRC 120 ARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRC Sbjct: 61 ARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRC 120 Query: 121 PDHDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARID 180 PDHDVPLAAQTVSQMVDNV+SQPEG+RLMLLAP++K+RKGEHTK LENLA+QGYIRARID Sbjct: 121 PDHDVPLAAQTVSQMVDNVISQPEGRRLMLLAPVVKDRKGEHTKILENLAAQGYIRARID 180 Query: 181 GEVCDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVADMDDP 240 GEVCDLSDPPKLELQKKHTIEVVVDRFKVR+DL QRLAESFETAL LSGGTAVVADMDDP Sbjct: 181 GEVCDLSDPPKLELQKKHTIEVVVDRFKVREDLAQRLAESFETALALSGGTAVVADMDDP 240 Query: 241 KAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPEL 300 EELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQ+FDPDRV+QNPEL Sbjct: 241 HVEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQFFDPDRVLQNPEL 300 Query: 301 SLAGGAIRGWDRRNFYYFQMLKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKENIEFKY 360 SLAGGAIRGWDRRNFYYFQML+SLA+HYKFD+EAP+ SL + V + VLYGSGK+ IEFKY Sbjct: 301 SLAGGAIRGWDRRNFYYFQMLRSLAEHYKFDIEAPFNSLDSAVQQAVLYGSGKDTIEFKY 360 Query: 361 MNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGTRLRREARH 420 +NDRGDT++RRHPFEGVLHNMERRYKETESSAVREELAKFISNR CASC GTRLRREAR+ Sbjct: 361 INDRGDTTVRRHPFEGVLHNMERRYKETESSAVREELAKFISNRSCASCSGTRLRREARY 420 Query: 421 VYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTL 480 V+VENT LP IS++SIGHA+ FF N+KL+GQRA+IAEKILKEIGDRLKFLVNVGLNYL+L Sbjct: 421 VFVENTTLPEISELSIGHALSFFQNMKLSGQRAQIAEKILKEIGDRLKFLVNVGLNYLSL 480 Query: 481 SRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNT 540 SRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLL TLIHLR+LGNT Sbjct: 481 SRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLETLIHLRNLGNT 540 Query: 541 VIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEV 600 VIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEG ++ IMA P SLTGQ++SGKR I + Sbjct: 541 VIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGTVDDIMAAPASLTGQFLSGKRSIAI 600 Query: 601 PKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQR 660 P+KRV A+P KVLKL GA GNNLKDVTLTLPVGLF+CITGVSGSGKSTLINDTL+ IAQR Sbjct: 601 PEKRVSADPSKVLKLIGATGNNLKDVTLTLPVGLFSCITGVSGSGKSTLINDTLYSIAQR 660 Query: 661 QLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPE 720 QLNGATI EPAPYR+IQGLEHFDKVIDIDQSPIGRTPRSNPATYTG+FTP+RELFAGVPE Sbjct: 661 QLNGATITEPAPYREIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGIFTPIRELFAGVPE 720 Query: 721 SRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKY 780 SR RGYTPGRFSFNV+GGRCEACQGDGVIKVEMHFLPDIYVPCD CKGKRYNRETLE+KY Sbjct: 721 SRTRGYTPGRFSFNVKGGRCEACQGDGVIKVEMHFLPDIYVPCDHCKGKRYNRETLEVKY 780 Query: 781 KGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKL 840 KGK+IHEVL MTIEEAREFFDAVPALARKLQTL+DVGL+YI LGQSATTLSGGEAQRVKL Sbjct: 781 KGKSIHEVLAMTIEEAREFFDAVPALARKLQTLIDVGLSYICLGQSATTLSGGEAQRVKL 840 Query: 841 ARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADW 900 +RELSKRGTGQTLYILDEPTTGLHFADIQQLL VLH+LRDQGNTIVVIEHNLDVIKTADW Sbjct: 841 SRELSKRGTGQTLYILDEPTTGLHFADIQQLLAVLHQLRDQGNTIVVIEHNLDVIKTADW 900 Query: 901 IVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLKPML 940 IVDLGPEGGSGGGEILVSGTPETVAEC ASHTARFLKPML Sbjct: 901 IVDLGPEGGSGGGEILVSGTPETVAECAASHTARFLKPML 940 >UniRef50_P44410 UvrABC system protein A n=133 Tax=cellular organisms RepID=UVRA_HAEIN Length = 943 Score = 1593 bits (4124), Expect = 0.0, Method: Compositional matrix adjust. Identities = 765/940 (81%), Positives = 856/940 (91%) Query: 1 MDKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAY 60 M+ I++RGARTHNLKNINL IPR+KL+V+TGLSGSGKSSLAFDTLYAEGQRRYVESLSAY Sbjct: 1 MENIDIRGARTHNLKNINLTIPRNKLVVITGLSGSGKSSLAFDTLYAEGQRRYVESLSAY 60 Query: 61 ARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRC 120 ARQFLSLMEKPDVD IEGLSPAISIEQKSTSHNPRSTVGTITEI+DYLRLLFARVGEPRC Sbjct: 61 ARQFLSLMEKPDVDSIEGLSPAISIEQKSTSHNPRSTVGTITEIYDYLRLLFARVGEPRC 120 Query: 121 PDHDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARID 180 PDH+VPL AQT+SQMVD VLS PE ++MLLAP++K RKGEH K LEN+A+QGYIRARID Sbjct: 121 PDHNVPLTAQTISQMVDKVLSLPEDSKMMLLAPVVKNRKGEHVKILENIAAQGYIRARID 180 Query: 181 GEVCDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVADMDDP 240 GE+CDLSDPPKL LQKKHTIEVVVDRFKVR DL RLAESFETALELSGGTA+VA+MD+P Sbjct: 181 GEICDLSDPPKLALQKKHTIEVVVDRFKVRSDLATRLAESFETALELSGGTAIVAEMDNP 240 Query: 241 KAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPEL 300 KAEEL+FSANFACP CGYS+ ELEPRLFSFNNPAGACPTCDGLGVQQYFD DRV+QNP + Sbjct: 241 KAEELVFSANFACPHCGYSVPELEPRLFSFNNPAGACPTCDGLGVQQYFDEDRVVQNPTI 300 Query: 301 SLAGGAIRGWDRRNFYYFQMLKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKENIEFKY 360 SLAGGA++GWDRRNFYY+QML SLA HY FDVEAP+ SL + ++++GSGKE IEF+Y Sbjct: 301 SLAGGAVKGWDRRNFYYYQMLTSLAKHYHFDVEAPYESLPKKIQHIIMHGSGKEEIEFQY 360 Query: 361 MNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGTRLRREARH 420 MNDRGD IR+HPFEG+L+NM RRYKETES +VREELAK ISNRPC C G+RLR EAR+ Sbjct: 361 MNDRGDVVIRKHPFEGILNNMARRYKETESMSVREELAKNISNRPCIDCGGSRLRPEARN 420 Query: 421 VYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTL 480 VY+ T LP I++ SIG +EFF L L GQ+A+IAEKILKEI +RL+FLVNVGLNYL+L Sbjct: 421 VYIGRTNLPIIAEKSIGETLEFFTALSLTGQKAQIAEKILKEIRERLQFLVNVGLNYLSL 480 Query: 481 SRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNT 540 SRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLL TLIHLR+LGNT Sbjct: 481 SRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLNTLIHLRNLGNT 540 Query: 541 VIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEV 600 VIVVEHDEDAIRAADH+IDIGPGAGVHGG+V+A+G + IM P S+TG+++SG KIE+ Sbjct: 541 VIVVEHDEDAIRAADHIIDIGPGAGVHGGQVIAQGNADEIMLNPNSITGKFLSGADKIEI 600 Query: 601 PKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQR 660 PKKR + +K LKL GA GNNLK+V L +PVGLFTC+TGVSGSGKSTLINDTLFP+AQ Sbjct: 601 PKKRTALDKKKWLKLKGASGNNLKNVNLDIPVGLFTCVTGVSGSGKSTLINDTLFPLAQN 660 Query: 661 QLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPE 720 LN A + APY+ I+GLEHFDKVIDI+QSPIGRTPRSNPATYTG+FTP+RELFAGVPE Sbjct: 661 ALNRAEKTDYAPYQSIEGLEHFDKVIDINQSPIGRTPRSNPATYTGLFTPIRELFAGVPE 720 Query: 721 SRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKY 780 +RARGY PGRFSFNVRGGRCEACQGDGV+KVEMHFLPD+YVPCDQCKGKRYNRETLEI+Y Sbjct: 721 ARARGYNPGRFSFNVRGGRCEACQGDGVLKVEMHFLPDVYVPCDQCKGKRYNRETLEIRY 780 Query: 781 KGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKL 840 KGKTIH+VLDMT+EEAREFFDA+P +ARKLQTLMDVGL+YIRLGQS+TTLSGGEAQRVKL Sbjct: 781 KGKTIHQVLDMTVEEAREFFDAIPMIARKLQTLMDVGLSYIRLGQSSTTLSGGEAQRVKL 840 Query: 841 ARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADW 900 A ELSKR TG+TLYILDEPTTGLHFADI+QLL+VLH+LRDQGNTIVVIEHNLDVIKTADW Sbjct: 841 ATELSKRDTGKTLYILDEPTTGLHFADIKQLLEVLHRLRDQGNTIVVIEHNLDVIKTADW 900 Query: 901 IVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLKPML 940 IVDLGPEGGSGGG+I+ +GTPE VA+ +SHTARFLKP+L Sbjct: 901 IVDLGPEGGSGGGQIIATGTPEQVAKVTSSHTARFLKPIL 940 >UniRef50_Q88QK7 UvrABC system protein A n=91 Tax=cellular organisms RepID=UVRA_PSEPK Length = 944 Score = 1500 bits (3884), Expect = 0.0, Method: Compositional matrix adjust. Identities = 707/940 (75%), Positives = 826/940 (87%), Gaps = 1/940 (0%) Query: 1 MDKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAY 60 MDKI +RGARTHNLKNI+L +PRDKLIV+TGLSGSGKSSLAFDTLYAEGQRRYVESLSAY Sbjct: 1 MDKILIRGARTHNLKNIDLTLPRDKLIVITGLSGSGKSSLAFDTLYAEGQRRYVESLSAY 60 Query: 61 ARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRC 120 ARQFLS+MEKPDVD IEGLSPAISIEQKSTSHNPRSTVGTITEI+DYLRLL+ARVG PRC Sbjct: 61 ARQFLSMMEKPDVDTIEGLSPAISIEQKSTSHNPRSTVGTITEIYDYLRLLYARVGTPRC 120 Query: 121 PDHDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARID 180 PDHD+PL AQT+SQMVD VL +PEG +LMLLAP+++ERKGEH + L +QG++RAR++ Sbjct: 121 PDHDIPLEAQTISQMVDLVLERPEGSKLMLLAPVVRERKGEHLAVFDELRAQGFVRARVN 180 Query: 181 GEVCDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVADMDDP 240 G++ +L + PKL+ QKKH+I+VVVDRFKVR DL QRLAESFETAL+L+ G A+VA MDD Sbjct: 181 GKLYELDELPKLDKQKKHSIDVVVDRFKVRADLQQRLAESFETALKLADGIALVAPMDDE 240 Query: 241 KAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPEL 300 + EE +FSA FACP+CG+++ ELEP+LFSFNNPAGACPTCDGLGV+Q+FD R++ N EL Sbjct: 241 QGEETIFSARFACPVCGHAISELEPKLFSFNNPAGACPTCDGLGVKQFFDTKRLV-NTEL 299 Query: 301 SLAGGAIRGWDRRNFYYFQMLKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKENIEFKY 360 +LA GAIRGWDRRN YYFQML SLA HY F +E P+G LSA KV+L GSGK++++FKY Sbjct: 300 TLAEGAIRGWDRRNVYYFQMLGSLAAHYGFSLEEPFGELSAEHQKVILQGSGKQSVDFKY 359 Query: 361 MNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGTRLRREARH 420 +NDRGD R HPFEG++ N+ERRY+ETES+ VREELAKF+ +PC C GTRLRREARH Sbjct: 360 LNDRGDIVKRSHPFEGIVPNLERRYRETESATVREELAKFLGTQPCPDCRGTRLRREARH 419 Query: 421 VYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTL 480 V+V LPA++++ IG A +F L L G+R +IA KILKEI +RL+FLVNVGL+YLTL Sbjct: 420 VWVGEKTLPAVTNLPIGEASNYFGQLTLTGRRGEIAAKILKEICERLQFLVNVGLDYLTL 479 Query: 481 SRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNT 540 RSA+TLSGGEAQRIRLASQIGAGLVGVMY+LDEPSIGLHQRDN+RLL TL HLRDLGNT Sbjct: 480 DRSADTLSGGEAQRIRLASQIGAGLVGVMYILDEPSIGLHQRDNDRLLATLNHLRDLGNT 539 Query: 541 VIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEV 600 VIVVEHDEDAIR AD+V+DIGPGAGVHGG++VAEG + +M P+SLTG+Y+SG++KI V Sbjct: 540 VIVVEHDEDAIRLADYVVDIGPGAGVHGGQIVAEGSPQEVMDHPDSLTGKYLSGRKKIVV 599 Query: 601 PKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQR 660 P KR P N + LKL GARGNNL++V L +P+GL TC+TGVSGSGKSTLIN+TL+P+A Sbjct: 600 PAKRTPRNKKLQLKLKGARGNNLQNVDLEVPIGLLTCVTGVSGSGKSTLINNTLYPLAAT 659 Query: 661 QLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPE 720 LNGA+ E AP+ + GL+H DKV+DIDQSPIGRTPRSNPATYTG+FTP+RELF+GVPE Sbjct: 660 ALNGASSLEAAPHSSMDGLQHLDKVVDIDQSPIGRTPRSNPATYTGIFTPIRELFSGVPE 719 Query: 721 SRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKY 780 SR+RGY PGRFSFNV+GGRCEACQGDG+IKVEMHFLPDIYVPCD CK KRYNRETLEIKY Sbjct: 720 SRSRGYGPGRFSFNVKGGRCEACQGDGLIKVEMHFLPDIYVPCDVCKSKRYNRETLEIKY 779 Query: 781 KGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKL 840 KGK IHEVL+MTIE+AREFFDAVPALARKLQTLMDVGL+YI+LGQSATTLSGGEAQRVKL Sbjct: 780 KGKNIHEVLEMTIEDAREFFDAVPALARKLQTLMDVGLSYIKLGQSATTLSGGEAQRVKL 839 Query: 841 ARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADW 900 +RELSKR TG+TLYILDEPTTGLHFADIQQLLDVLH+LRD GNT+VVIEHNLDVIKTADW Sbjct: 840 SRELSKRDTGKTLYILDEPTTGLHFADIQQLLDVLHRLRDHGNTVVVIEHNLDVIKTADW 899 Query: 901 IVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLKPML 940 +VDLGPEGGS GG+I+ GTPE ++E + S+T +LKP+L Sbjct: 900 LVDLGPEGGSKGGQIIACGTPEELSEMKQSYTGHYLKPLL 939 >UniRef50_Q87BK9 UvrABC system protein A n=247 Tax=cellular organisms RepID=UVRA_XYLFT Length = 965 Score = 1379 bits (3568), Expect = 0.0, Method: Compositional matrix adjust. Identities = 662/938 (70%), Positives = 792/938 (84%), Gaps = 3/938 (0%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 63 I +RGARTHNLKN++L +PR+ LIV+TGLSGSGKSSLAFDT+YAEGQRRYVESLSAYARQ Sbjct: 5 IRIRGARTHNLKNLDLDLPRNTLIVITGLSGSGKSSLAFDTIYAEGQRRYVESLSAYARQ 64 Query: 64 FLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCPDH 123 FLS+MEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEI+DYLRLL+ARVG+PRCP+H Sbjct: 65 FLSVMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIYDYLRLLYARVGQPRCPEH 124 Query: 124 DVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARIDGEV 183 PL AQTVSQMVD+VL+ +R MLLAP+++ERKGEHT+ E L +QG++R R+DGE+ Sbjct: 125 HYPLEAQTVSQMVDHVLTLDPEQRYMLLAPVVRERKGEHTQVFEQLRAQGFVRVRVDGEL 184 Query: 184 CDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVADMDDPKAE 243 ++ P L L++KHTIE V+DRF+ R+D+ QRLAESFETAL+L G A V +D A Sbjct: 185 YEIDAVPTLTLRQKHTIEAVIDRFRPREDIKQRLAESFETALKLGNGMASVQTLDTTTAT 244 Query: 244 ELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPELSLA 303 LFS+ ++CP+C YS+ ELEPRLFSFN P GACP C+GLGV ++FDP +V+ +P+LSL+ Sbjct: 245 PHLFSSKYSCPVCDYSLPELEPRLFSFNAPMGACPACNGLGVTEFFDPAKVVIHPDLSLS 304 Query: 304 GGAIRGWDRRNFYYFQMLKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKENIEFKYMND 363 GA+RGWDRRN YYFQ++ SLA HY FD++A W SL + +L+GSG E I F Y+ + Sbjct: 305 AGAVRGWDRRNAYYFQLIASLAKHYTFDIDASWESLPEEIRHTILFGSGDEQINFTYLTE 364 Query: 364 RGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGTRLRREARHVYV 423 G + R+H FEG++ N+ERRY+ETES+AVREELAK++S R C C GTRL R AR+V+V Sbjct: 365 AGGRTKRKHRFEGIVPNLERRYRETESAAVREELAKYVSTRTCPECGGTRLNRAARNVFV 424 Query: 424 ENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTLSRS 483 + LP ++ + I A+EFF L+L+G R +IA KI+KEIG+RL FLV+VGL+YLTL R Sbjct: 425 ADRTLPELTVLPINDALEFFKTLRLSGWRGEIAIKIVKEIGERLGFLVDVGLDYLTLERK 484 Query: 484 AETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIV 543 A+TLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTL LRDLGNTVIV Sbjct: 485 ADTLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLTRLRDLGNTVIV 544 Query: 544 VEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEVPKK 603 VEHDEDAIR ADH++DIGPGAGVHGGE+ A+G LE IMA P SLTGQY+SG+R+IE+PK+ Sbjct: 545 VEHDEDAIRQADHILDIGPGAGVHGGEICAQGSLEQIMAAPRSLTGQYLSGRRRIEIPKQ 604 Query: 604 RVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLN 663 R P N K+L L GA GNNLK V L +P GLFTCITGVSGSGKSTLINDTLF +A ++N Sbjct: 605 RHPPNATKMLHLRGACGNNLKGVNLDIPEGLFTCITGVSGSGKSTLINDTLFTLAANEIN 664 Query: 664 GATIAEP-APYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESR 722 GA+ P APY + GLE FDKV+DIDQSPIGRTPRSNPATYTG+FTP+RELFA VPE+R Sbjct: 665 GAS--HPIAPYASVDGLELFDKVVDIDQSPIGRTPRSNPATYTGMFTPLRELFAQVPEAR 722 Query: 723 ARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKYKG 782 ARGY+PGRFSFNVRGGRCEAC+GDG+IKVEMHFLPD+YVPCD C GKRYNRETLEI+YKG Sbjct: 723 ARGYSPGRFSFNVRGGRCEACEGDGLIKVEMHFLPDVYVPCDICHGKRYNRETLEIRYKG 782 Query: 783 KTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLAR 842 I++VL+MT+E+A + F+AVPA+ARKL+TL+DVGL+Y++LGQSATTLSGGEAQRVKL++ Sbjct: 783 YNINDVLEMTVEDALKLFEAVPAIARKLETLVDVGLSYLKLGQSATTLSGGEAQRVKLSK 842 Query: 843 ELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADWIV 902 ELS+R TG TLYILDEPTTGLHF DI+ LL V+HKLRD GNT++VIEHNLDVIKTADW++ Sbjct: 843 ELSRRDTGHTLYILDEPTTGLHFYDIEALLAVMHKLRDAGNTVIVIEHNLDVIKTADWVI 902 Query: 903 DLGPEGGSGGGEILVSGTPETVAECEASHTARFLKPML 940 DLGPEGG GGEILV+GTPETVA SHT FL +L Sbjct: 903 DLGPEGGGRGGEILVAGTPETVAAHPHSHTGHFLAKLL 940 Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 39/118 (33%), Positives = 61/118 (51%), Gaps = 6/118 (5%) Query: 612 VLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAEPA 671 ++++ GAR +NLK++ L LP ITG+SGSGKS+L DT++ QR+ + A Sbjct: 4 LIRIRGARTHNLKNLDLDLPRNTLIVITGLSGSGKSSLAFDTIYAEGQRRYVESLSAYAR 63 Query: 672 PYR------DIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESRA 723 + D+ +E I I+Q PRS T T ++ +R L+A V + R Sbjct: 64 QFLSVMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIYDYLRLLYARVGQPRC 121 >UniRef50_A5WGZ4 Excinuclease ABC subunit A n=24 Tax=Bacteria RepID=A5WGZ4_PSYWF Length = 992 Score = 1283 bits (3319), Expect = 0.0, Method: Compositional matrix adjust. Identities = 631/985 (64%), Positives = 767/985 (77%), Gaps = 46/985 (4%) Query: 2 DKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYA 61 + I++RGARTHNLKNI++ IPRDK +V+TGLSGSGKSSLAFDTLYAEGQRRYVESLSAYA Sbjct: 4 EHIKIRGARTHNLKNIDIDIPRDKFVVITGLSGSGKSSLAFDTLYAEGQRRYVESLSAYA 63 Query: 62 RQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCP 121 RQFLS M+KP+VD IEGLSPAI+IEQKST+HNPRSTVGTITEI+DYLRLL+ARVG P CP Sbjct: 64 RQFLSQMDKPEVDSIEGLSPAIAIEQKSTNHNPRSTVGTITEIYDYLRLLYARVGTPFCP 123 Query: 122 DHDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARIDG 181 H++P+ AQT+++MVD++++ PE +LM+LAP+I++RKGEH LE L QG++R R+DG Sbjct: 124 VHNLPMVAQTITEMVDDIMALPEDTKLMILAPVIRDRKGEHVVLLEQLVGQGFVRVRVDG 183 Query: 182 EVCDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVADMD--- 238 V D+ + P LE KKHTIEVVVDRFKVR+DL R+AES ETAL L A++ MD Sbjct: 184 HVYDMDELPALEKNKKHTIEVVVDRFKVREDLGNRVAESLETALRLGSDLAILNYMDGNP 243 Query: 239 DPKA-----EELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDR 293 +P A ++ + SA +CPIC ++ ELEPRLFSFNNP GACP CDGLG +QYF ++ Sbjct: 244 NPDASNQDSDDQILSAKHSCPICDRAVSELEPRLFSFNNPYGACPACDGLGKRQYFSAEK 303 Query: 294 VIQNPELSLAGGAIRGWDRRNFYYFQMLKSLADHYKFDVEAPWGSLSANVHKVVLYGSGK 353 +I NPE SL GA+ GWD+R+ YYF +L ++A HY D++ PW + ++L GSGK Sbjct: 304 LITNPEKSLNQGAVNGWDKRHAYYFGLLNTVAKHYNIDMDIPWQEIDKEHRDIILNGSGK 363 Query: 354 ENIEFKYMNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGTR 413 E IEF + ++RG + + PFEGVL +ERRY +T+S+ VR+ELAK++++ C C+G R Sbjct: 364 EKIEFNFTDERGRKTKKTTPFEGVLPYLERRYAKTQSNFVRDELAKYLADTTCNVCDGAR 423 Query: 414 LRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNV 473 L AR+V V+ + I MSIG A +++ +L+++G + +I+EKI KEI +RL FLV+V Sbjct: 424 LNEIARNVRVDGQGIADIVQMSIGDAADYYKDLQMSGSKGEISEKIFKEINERLNFLVSV 483 Query: 474 GLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIH 533 GL+YL L+RSAETLSGGEAQRIRLASQIGAGL+GVMYVLDEPSIGLHQRDN+RLL TL Sbjct: 484 GLDYLNLARSAETLSGGEAQRIRLASQIGAGLMGVMYVLDEPSIGLHQRDNDRLLQTLTR 543 Query: 534 LRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMS 593 LRDLGNTV+VVEHDEDAIR ADHVIDIG GAGVHGG V+A+G ++ IM V ESLTGQY+S Sbjct: 544 LRDLGNTVLVVEHDEDAIRQADHVIDIGVGAGVHGGHVIAQGTMQEIMDVEESLTGQYLS 603 Query: 594 GKRKIEVPKKRVPAN-------PEKV-------------------------------LKL 615 GK++I +PK R A PEK ++L Sbjct: 604 GKKEIAIPKVRHKAKTIDLNNPPEKARIMPMGKAKAAAAAKEAKNKKPKAKNIVPMQIEL 663 Query: 616 TGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAEPAPYRD 675 GA GNNL+DV LT+P+G FTC+TGVSGSGKSTLIN TL P+A QLN A+ P Y Sbjct: 664 KGANGNNLQDVDLTIPIGTFTCVTGVSGSGKSTLINRTLMPLAATQLNNASTLIPDKYDS 723 Query: 676 IQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESRARGYTPGRFSFNV 735 I GLE+ DK++DIDQSPIGRTPRSNPATYTGVFTP+R+LF+ E++ARGY GRFSFNV Sbjct: 724 ITGLEYLDKMVDIDQSPIGRTPRSNPATYTGVFTPIRDLFSQTQEAKARGYKAGRFSFNV 783 Query: 736 RGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEE 795 +GGRCE CQGDG+IKVEMHFLPD+YVPCD C GKRYNRETLEI YKGK+I EVLDMT+E+ Sbjct: 784 KGGRCETCQGDGLIKVEMHFLPDMYVPCDICHGKRYNRETLEIHYKGKSIAEVLDMTVED 843 Query: 796 AREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYI 855 A EFF A+P + R+LQ LMDVGL+YIRLGQSA TLSGGEAQRVKLAREL+KR TGQTLYI Sbjct: 844 ATEFFSAIPPIHRRLQALMDVGLSYIRLGQSAPTLSGGEAQRVKLARELAKRDTGQTLYI 903 Query: 856 LDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEI 915 LDEPTTGLHF DI +LL++LH LRD+GNTIVVIEHNLDVIKTADWIVDLGPEGG GG I Sbjct: 904 LDEPTTGLHFHDIYKLLNILHTLRDKGNTIVVIEHNLDVIKTADWIVDLGPEGGKNGGMI 963 Query: 916 LVSGTPETVAECEASHTARFLKPML 940 + GTPE VA + S T +FLKPML Sbjct: 964 IAEGTPEEVANTKESFTGQFLKPML 988 >UniRef50_Q21RX9 Excinuclease ABC subunit A n=19 Tax=Bacteria RepID=Q21RX9_RHOFD Length = 1052 Score = 1238 bits (3203), Expect = 0.0, Method: Compositional matrix adjust. Identities = 621/1030 (60%), Positives = 766/1030 (74%), Gaps = 91/1030 (8%) Query: 1 MDKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAY 60 + I +RGARTHNLKNI+L IPR++L+V+TGLSGSGKSSLAFDTLYAEGQRRYVESLS Y Sbjct: 24 LQNISIRGARTHNLKNIDLDIPRNQLVVITGLSGSGKSSLAFDTLYAEGQRRYVESLSTY 83 Query: 61 ARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRC 120 ARQFL LM+KPDVD IEGLSPAISIEQK+TSHNPRSTVGT+TEIHDYLRLLFAR G P C Sbjct: 84 ARQFLQLMDKPDVDLIEGLSPAISIEQKATSHNPRSTVGTVTEIHDYLRLLFARAGTPFC 143 Query: 121 PDHDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARID 180 P+HD+PL +QTVSQMVD VL+ P RLM+LAP+ +E+KGE ++ +QGY+R R++ Sbjct: 144 PEHDLPLQSQTVSQMVDAVLALPLDTRLMILAPLAREKKGEFLDVFADMQAQGYVRFRVN 203 Query: 181 GEVCDLSDPPKLELQKKHTIEVVVDRFKVR------------------------------ 210 G+ + + P L+ +KH I+VV+DR KVR Sbjct: 204 GQAFEFDELPALKKTEKHDIDVVIDRIKVRHPPAQQASAEADSDAAPDPTPDASRSAAQA 263 Query: 211 --DDLTQRLAESFETALELSGGTAVVADMDDPKAE--------ELLFSANFACPICGYSM 260 ++L QRLAESFE AL L+GG A+ ++D E +F+A FACP+C YS+ Sbjct: 264 DFENLRQRLAESFEAALRLAGGRAIAVEIDSVSRNNDGGYRPIEHIFNAKFACPVCSYSI 323 Query: 261 RELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPELSLAGGAIRGWDRRNFYYFQM 320 ELEPRLFSFN+P GACP CDGLG +FDP RV+ P LSLAGGAI+GWDRRN YYF M Sbjct: 324 AELEPRLFSFNSPVGACPACDGLGANDFFDPARVVAFPSLSLAGGAIKGWDRRNAYYFAM 383 Query: 321 LKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKENIEFKYMNDRGDTS----IRRHPFEG 376 L+SLA HY+FD+E + SL V VL+GSG+E+I+F Y+ D G + ++HPFEG Sbjct: 384 LESLAAHYQFDIEQAFESLPPTVQHAVLFGSGEEDIKFSYVMDSGTQTGKKVSKKHPFEG 443 Query: 377 VLHNMERRYKETESSAVREELAKFISNRPCASCEGTRLRREARHVYV----ENTPLPAIS 432 ++ NM+RRY ET+S+ VRE+LA++ S +PC C G+RLRREARHV + + + +S Sbjct: 444 IIPNMQRRYAETDSAVVREDLARYRSTQPCPQCGGSRLRREARHVKIGEGEQARAIFELS 503 Query: 433 DMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEA 492 +++ + ++FN L + G + +IA K+++EIG RLKFL +VGLNYL+L RSAE+LSGGE+ Sbjct: 504 HLTLRESYQYFNTLSMHGAKGEIASKVVREIGLRLKFLNDVGLNYLSLDRSAESLSGGES 563 Query: 493 QRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIR 552 QRIRLASQIG+GL GVMYVLDEPSIGLHQRDN+RL+GTL HLRD+GN+V+VVEHDED +R Sbjct: 564 QRIRLASQIGSGLTGVMYVLDEPSIGLHQRDNDRLIGTLKHLRDIGNSVLVVEHDEDMMR 623 Query: 553 AADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEVPKKRVPANPE-- 610 AADH+ID+GPGAG+HGG V+A+G E + A ESLTGQY++ +I VP++R P P Sbjct: 624 AADHIIDMGPGAGLHGGRVMAQGTFEQVRANTESLTGQYLAHTLRIAVPRQRTPWLPTVQ 683 Query: 611 ------------------------------------KVLKLTGARGNNLKDVTLTLPVGL 634 + L++ GA G+NL+ V + PVGL Sbjct: 684 ARAAADKPKAHRFAPSPAALRRAEREALHLATQGKLQSLRVIGASGHNLQGVDVEFPVGL 743 Query: 635 FTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIG 694 FTC+TGVSGSGKSTL+NDTL+ R L A EPA + I+G+EHFDKVI +DQSPIG Sbjct: 744 FTCVTGVSGSGKSTLVNDTLYAAVARTLYRAH-EEPAGHEAIEGIEHFDKVISVDQSPIG 802 Query: 695 RTPRSNPATYTGVFTPVRELFAGVPESRARGYTPGRFSFNVR----GGRCEACQGDGVIK 750 RTPRSNPATYTG+FTP+REL A VP +R RGY PGRFSFNV GGRCEACQGDG++K Sbjct: 803 RTPRSNPATYTGLFTPIRELMAEVPMARERGYGPGRFSFNVSQSSGGGRCEACQGDGMVK 862 Query: 751 VEMHFLPDIYVPCDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKL 810 VEMHFLPD+YVPCD C G RYNRETLE+ YKGK I ++LD+T+E A EFF AVP +ARKL Sbjct: 863 VEMHFLPDVYVPCDVCVGHRYNRETLEVLYKGKNIAQILDLTVEVAHEFFKAVPTIARKL 922 Query: 811 QTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQ 870 +TL+DVGL+YIRLGQSATTLSGGEAQRVKLA ELSKR TG+TLYILDEPTTGLHFADI Sbjct: 923 RTLLDVGLSYIRLGQSATTLSGGEAQRVKLALELSKRDTGRTLYILDEPTTGLHFADIDL 982 Query: 871 LLDVLHKLRDQGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEAS 930 LL VLH+LRD GNTIVVIEHNLDVIKTADW++D+GPEGG+GGG+++ GTPE +A AS Sbjct: 983 LLKVLHQLRDAGNTIVVIEHNLDVIKTADWLIDMGPEGGAGGGQVVGIGTPEDLAANPAS 1042 Query: 931 HTARFLKPML 940 HT +LK +L Sbjct: 1043 HTGHYLKRLL 1052 >UniRef50_O31151 UvrABC system protein A n=81 Tax=Bacteria RepID=UVRA_ZYMMO Length = 946 Score = 1168 bits (3022), Expect = 0.0, Method: Compositional matrix adjust. Identities = 577/945 (61%), Positives = 732/945 (77%), Gaps = 8/945 (0%) Query: 1 MDKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAY 60 + I +RGAR HNLKN+++ IPR+KL+V+TGLSGSGKSSLAFDT+YAEGQRRYVESLSAY Sbjct: 2 LSTISIRGAREHNLKNVSIDIPRNKLVVMTGLSGSGKSSLAFDTIYAEGQRRYVESLSAY 61 Query: 61 ARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRC 120 ARQFL +M+KPDVDHIEGLSPAISIEQK+TS NPRSTV T+TEI+DY+RLL+ARVG P Sbjct: 62 ARQFLEMMQKPDVDHIEGLSPAISIEQKTTSKNPRSTVATVTEIYDYMRLLWARVGIPYS 121 Query: 121 PDHDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARID 180 P +P+ AQTVSQMVD V++ PEG RL LLAP+++ RKGE+ K + G+ R RID Sbjct: 122 PATGLPITAQTVSQMVDRVMALPEGSRLHLLAPVVRGRKGEYRKEMAEWQKAGFSRLRID 181 Query: 181 GEVCDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVADMDDP 240 GE + + PK++ ++KH IEVVVDR +++ L RLA+S ETAL+L+GG A+ D+ Sbjct: 182 GEYYLIEEAPKIDKKRKHDIEVVVDRLVIKEGLETRLAQSLETALKLAGGIAISEPADEG 241 Query: 241 KAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPEL 300 E +LFS +F+CP+ G+++ E+EPRLFSFN P GACP CDGLG + YFD ++ N L Sbjct: 242 SFEPMLFSEHFSCPVSGFTIPEIEPRLFSFNAPQGACPACDGLGEKPYFDVRLIVPNESL 301 Query: 301 SLAGGAIRGWDRR---NFYYFQMLKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKENIE 357 SLA GA+ W R + YY Q+L SLA +Y F +E PW L + V+LYGS E I Sbjct: 302 SLAKGALMPWARSTPPSPYYMQILSSLARYYDFSLETPWKKLPEKIQNVILYGSEGEVIP 361 Query: 358 FKYMNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGTRLRRE 417 ++ + + FEGV+ N+ERR T+S ++RE++ ++ S PC C G RLR E Sbjct: 362 LRFSEGNQIYEVEK-AFEGVIRNLERRLVTTDSESIREDIGRYQSAAPCEVCHGARLRPE 420 Query: 418 ARHVYVENTPLPAISDMSIGHAMEFFNNL--KLAGQRAKIAEKILKEIGDRLKFLVNVGL 475 A V +++ + ++ M++ A+EFF L KL + +IAE+ILKEI +RL FL NVGL Sbjct: 421 ALAVLIDHHNISDVTKMTVKPALEFFRQLPEKLTEAQNQIAERILKEIIERLGFLDNVGL 480 Query: 476 NYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLR 535 +YL+L RS+ TLSGGE+QRIRLASQIG+GL GV+YVLDEPSIGLHQRDN+RLL TL LR Sbjct: 481 DYLSLDRSSGTLSGGESQRIRLASQIGSGLSGVLYVLDEPSIGLHQRDNDRLLETLKRLR 540 Query: 536 DLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGK 595 DLGN+V+VVEHDEDAIR AD+V+D+GPGAGV GG+V+A G + I+ P+SLTG Y+SG+ Sbjct: 541 DLGNSVLVVEHDEDAIRLADYVVDMGPGAGVMGGKVIAAGSPQDIIDCPDSLTGAYLSGR 600 Query: 596 RKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLF 655 R+I VP KR N +K L + GA NNL++VT ++P+G FTC+TGVSGSGKS+LI DTL+ Sbjct: 601 REIAVPDKRRKGNGKK-LTIKGATANNLQNVTASIPLGTFTCVTGVSGSGKSSLILDTLY 659 Query: 656 PIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELF 715 A R+LNGA + Y+ I GLEH DKVIDIDQSPIGRTPRSNPATYTG FT +RE F Sbjct: 660 TAAARELNGARLIS-GDYKSISGLEHLDKVIDIDQSPIGRTPRSNPATYTGAFTAIREWF 718 Query: 716 AGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRET 775 A +PE++ARGY GRFSFNV+GGRCEACQGDGV K+EMHFLPD+YV CD C G RYNRET Sbjct: 719 AKLPEAQARGYKAGRFSFNVKGGRCEACQGDGVKKIEMHFLPDVYVTCDVCHGARYNRET 778 Query: 776 LEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEA 835 E+K+KG++I +VL+MT+++A EFF+AVP++ K+ L VGL YI++GQ ATTLSGGEA Sbjct: 779 QEVKFKGQSIADVLNMTVDQAAEFFEAVPSIRDKMAMLARVGLGYIKVGQQATTLSGGEA 838 Query: 836 QRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVI 895 QRVKLA+ELSKR TG+TLYILDEPTTGLHF D+++LL+VL+ L DQGN+IVVIEHNLDVI Sbjct: 839 QRVKLAKELSKRATGRTLYILDEPTTGLHFEDVRKLLEVLNALVDQGNSIVVIEHNLDVI 898 Query: 896 KTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLKPML 940 KTADW++DLGPEGG+GGG+I+ +GTPE VAE E S+T +LK ML Sbjct: 899 KTADWLIDLGPEGGTGGGQIIAAGTPEKVAETEGSYTGHYLKRML 943 >UniRef50_A8ID62 Excinuclease ABC A subunit n=66 Tax=Bacteria RepID=A8ID62_AZOC5 Length = 1084 Score = 1155 bits (2987), Expect = 0.0, Method: Compositional matrix adjust. Identities = 582/948 (61%), Positives = 734/948 (77%), Gaps = 18/948 (1%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 63 + VRGAR HNLKN++L IPRD L+V TGLSGSGKSSLAFDT+YAEGQRRYVESLSAYARQ Sbjct: 128 LSVRGAREHNLKNVDLDIPRDSLVVFTGLSGSGKSSLAFDTIYAEGQRRYVESLSAYARQ 187 Query: 64 FLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCPDH 123 FL +M+KPDVD I+GLSPAISIEQK+TS NPRSTVGT+TEI+DY+RLL+AR G P P Sbjct: 188 FLEMMQKPDVDQIDGLSPAISIEQKTTSKNPRSTVGTVTEIYDYMRLLWARAGVPYSPAT 247 Query: 124 DVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARIDGEV 183 +P+ +QTVSQMVD L PEG RL +LAP+++ RKGE+ K + +G+ R ++DG Sbjct: 248 GLPIESQTVSQMVDRTLDLPEGSRLYILAPVVRGRKGEYRKEMAEFLKKGFQRVKVDGAF 307 Query: 184 CDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVADMDDPKAE 243 ++++ P L+ + KH I+VVVDR VR D+ RLA+SFETAL L+ G AV+ D +A+ Sbjct: 308 HEIAEAPALDKKLKHDIDVVVDRVVVRADIAARLADSFETALGLADGIAVLEFADQKEAD 367 Query: 244 ----ELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPE 299 ++FS FACP+ G+++ E+EPRLFSFNNP GACP CDGLGV+Q DPD V+ + Sbjct: 368 GSPKRVIFSEKFACPVSGFTIPEIEPRLFSFNNPFGACPACDGLGVEQTIDPDLVVPDKS 427 Query: 300 LSLAGGAIRGWDRRNF-YYFQMLKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKENIEF 358 +L GAI W + YY Q L +LA HYKF + P+ L V+L+GSG+E I F Sbjct: 428 RTLKQGAIAPWAKSTSPYYGQTLDALAKHYKFKLTVPFAELPKKAQDVILFGSGEEEIAF 487 Query: 359 KYMNDRGDTSIR----RHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGTRL 414 Y D +R + FEG++ N++RR++ETES REE++K+ S PCA+C G RL Sbjct: 488 SY-----DDGLRAYETKKTFEGIVRNLDRRWRETESDWAREEISKYFSTVPCATCAGYRL 542 Query: 415 RREARHVYVENTPLPAISDMSIGHAMEFFNNL--KLAGQRAKIAEKILKEIGDRLKFLVN 472 + EA V + + + +MS+ A +F +L L+ ++ +IA +ILKEI +RL+FL++ Sbjct: 543 KPEALAVKIAGNHIGQVGEMSVRSASAWFEDLPGTLSDKQNEIAARILKEIRERLRFLMD 602 Query: 473 VGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLI 532 VGL YLTL RS+ TLSGGE+QRIRLASQIG+GL GV+YVLDEPSIGLHQRDN RLL TL Sbjct: 603 VGLEYLTLGRSSGTLSGGESQRIRLASQIGSGLSGVLYVLDEPSIGLHQRDNARLLETLK 662 Query: 533 HLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYM 592 LRDLGNTVIVVEHDEDAI AAD+V+D+GPGAG+HGG +VA+G + I+A P S+TG+Y+ Sbjct: 663 RLRDLGNTVIVVEHDEDAILAADYVVDVGPGAGIHGGRIVAQGTPQEILADPASITGKYL 722 Query: 593 SGKRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLIND 652 +G+ + +R P NP K LKL+GARGNNLK+VT +P+GLFT ITGVSG GKSTL+ D Sbjct: 723 TGELSVPPAPRRKP-NPRKTLKLSGARGNNLKNVTAEIPLGLFTSITGVSGGGKSTLLID 781 Query: 653 TLFPIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVR 712 TL+ R+LN A A PAP+ ++GLEH DKVIDIDQSPIGRTPRSNPATYTG FTP+R Sbjct: 782 TLYKAVARRLNNAHDA-PAPFDKLEGLEHLDKVIDIDQSPIGRTPRSNPATYTGAFTPIR 840 Query: 713 ELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYN 772 E F+G+PE++ARGY PGRFSFNV+GGRCEACQGDGVIK+EMHFLPD+YV CD CKGKRYN Sbjct: 841 EWFSGLPEAKARGYGPGRFSFNVKGGRCEACQGDGVIKIEMHFLPDVYVTCDVCKGKRYN 900 Query: 773 RETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSG 832 RETLE+ ++ K+I +VLDMT++E EFF AVP++ KL+TL VGL YI++GQ ATTLSG Sbjct: 901 RETLEVTFREKSIADVLDMTVDEGAEFFKAVPSVRDKLETLAQVGLGYIKVGQQATTLSG 960 Query: 833 GEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNL 892 GEAQRVKLA+ELSKR TG+TLYILDEPTTGLHF D+ +LL+VLH+L +QGNT+VVIEHNL Sbjct: 961 GEAQRVKLAKELSKRATGRTLYILDEPTTGLHFHDVAKLLEVLHELVEQGNTVVVIEHNL 1020 Query: 893 DVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLKPML 940 +VIKT+DW++DLGPEGG GGGEILV+G P+ VA+ + SHT FL +L Sbjct: 1021 EVIKTSDWVIDLGPEGGDGGGEILVAGPPDVVAKEKRSHTGTFLAEVL 1068 Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 59/193 (30%), Positives = 87/193 (45%), Gaps = 22/193 (11%) Query: 545 EHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGK----RKIEV 600 EH D V+ + P V+ P P S + + MS + R + Sbjct: 66 EHPRSVSCRTDAVLKLPPATAGRDPSVLCGPP-------PASPSSRLMSDRKPSSRAVTA 118 Query: 601 PKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQR 660 PK R A ++L + GAR +NLK+V L +P TG+SGSGKS+L DT++ QR Sbjct: 119 PKDRRDA---RLLSVRGAREHNLKNVDLDIPRDSLVVFTGLSGSGKSSLAFDTIYAEGQR 175 Query: 661 QLNGATIA------EPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVREL 714 + + A E D+ ++ I I+Q + PRS T T ++ +R L Sbjct: 176 RYVESLSAYARQFLEMMQKPDVDQIDGLSPAISIEQKTTSKNPRSTVGTVTEIYDYMRLL 235 Query: 715 F--AGVPESRARG 725 + AGVP S A G Sbjct: 236 WARAGVPYSPATG 248 >UniRef50_Q8ENJ6 UvrABC system protein A n=258 Tax=cellular organisms RepID=UVRA_OCEIH Length = 958 Score = 1149 bits (2972), Expect = 0.0, Method: Compositional matrix adjust. Identities = 558/941 (59%), Positives = 722/941 (76%), Gaps = 11/941 (1%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 63 I+++GARTHNLK+I++ IP++KL+V+TGLSGSGKSSLAFDT+YAEGQRRYVESLS+YARQ Sbjct: 6 IKIQGARTHNLKDIDIDIPKNKLVVLTGLSGSGKSSLAFDTIYAEGQRRYVESLSSYARQ 65 Query: 64 FLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCPDH 123 FL M+KPDVD IEGLSPAISI+QK+TS NPRSTVGT+TEI+DYLRLL+ARVG P CP+H Sbjct: 66 FLGQMDKPDVDVIEGLSPAISIDQKTTSKNPRSTVGTVTEIYDYLRLLYARVGRPTCPNH 125 Query: 124 DVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARIDGEV 183 + +++QTV QMVD +L PE +L +LAP++ RKGEH K LENL +GY+R R+D E+ Sbjct: 126 GIEISSQTVQQMVDRILEYPERTKLQILAPVVSGRKGEHVKILENLKQEGYVRIRVDNEM 185 Query: 184 CDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVADMDDPKAE 243 +++D +LE KKH+IEVV+DR V+D + RL++S ETAL+L G +V D E Sbjct: 186 REVTDDIQLEKNKKHSIEVVIDRIVVKDGVASRLSDSIETALKLGEGNIIV---DVIGEE 242 Query: 244 ELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPELSLA 303 EL FS N ACPICG+S+ ELEPRLFSFN+P GACP+CDGLG + D D VI + E +L Sbjct: 243 ELTFSENHACPICGFSIGELEPRLFSFNSPFGACPSCDGLGTKLEVDIDLVIPDWEKTLN 302 Query: 304 GGAIRGWDR-RNFYYFQMLKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKENIEFKYMN 362 AI W+ + YY Q+LKS+ +H+ D++ P + ++L GSGKE I+F+Y N Sbjct: 303 ENAIAPWEPISSQYYPQLLKSVCNHFGIDMDIPVKEIPQQQMDIILQGSGKEKIKFEYEN 362 Query: 363 DRGDTSIRRH--PFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGTRLRREARH 420 D G SIRR PFEGVL N+ RRY+ET S +RE L K+++ + C +C+G RL++EA Sbjct: 363 DFG--SIRRSEAPFEGVLKNVARRYRETSSDFIRETLEKYMAQKNCPTCKGHRLKKEALA 420 Query: 421 VYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTL 480 V + + ++D SI +++ F L L + +IA ILKEI +RL+FL NVGL+YLTL Sbjct: 421 VLINGKHISNVTDYSIVESIQLFQQLDLTEKEQQIARLILKEIDNRLEFLNNVGLDYLTL 480 Query: 481 SRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNT 540 SR+A TLSGGEAQRIRLA+QIG+ L GV+YVLDEPSIGLHQRDN+RL+ TL +RDL NT Sbjct: 481 SRTAGTLSGGEAQRIRLATQIGSALTGVLYVLDEPSIGLHQRDNDRLIDTLKRMRDLDNT 540 Query: 541 VIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEV 600 +IVVEHDED + AAD ++DIGPGAG HGGE+VA + +M +SLTG+Y+SGK I + Sbjct: 541 LIVVEHDEDTMLAADWLVDIGPGAGEHGGEIVASDTPQNVMKNEQSLTGKYLSGKEFIPL 600 Query: 601 PKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQR 660 P KR N K+ ++ GA NNLK+V+ +P+GL T +TGVSGSGKSTL+N+ ++ + Sbjct: 601 PTKRRKPNKRKI-EVMGASENNLKNVSAKIPIGLMTVVTGVSGSGKSTLVNEIVYKSLAK 659 Query: 661 QLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPE 720 L + +P ++ I+G+EH DKVIDIDQSPIGRTPRSNPATYTGVF +R++FA E Sbjct: 660 SLYKGKV-KPGKHKKIKGIEHIDKVIDIDQSPIGRTPRSNPATYTGVFDDIRDVFAQTNE 718 Query: 721 SRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKY 780 ++ RGY GRFSFNV+GGRCEAC+GDG++K+EMHFLPD+YVPC+ C G RYNRETLE+KY Sbjct: 719 AKVRGYKKGRFSFNVKGGRCEACRGDGILKIEMHFLPDVYVPCEVCHGARYNRETLEVKY 778 Query: 781 KGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKL 840 KGK I EVL++ IEEA EFF A+P + RKLQT+ DVGL YIRLGQ ATTLSGGEAQRVKL Sbjct: 779 KGKNISEVLELRIEEALEFFSAIPKIKRKLQTVYDVGLGYIRLGQPATTLSGGEAQRVKL 838 Query: 841 ARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADW 900 A EL KR TG++ YILDEPTTGLH DI++LL VL ++ D G+++++IEHNLDVIK+AD Sbjct: 839 ASELHKRSTGKSFYILDEPTTGLHVDDIRRLLSVLQRIADNGDSVLIIEHNLDVIKSADH 898 Query: 901 IVDLGPEGGSGGGEILVSGTPETVAECE-ASHTARFLKPML 940 I+DLGPEGG GG+I+ +GTPE +AE + S+T ++L P+L Sbjct: 899 IIDLGPEGGDRGGQIIATGTPEQIAEQQDVSYTGKYLSPVL 939 Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 38/114 (33%), Positives = 60/114 (52%), Gaps = 6/114 (5%) Query: 611 KVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAEP 670 K +K+ GAR +NLKD+ + +P +TG+SGSGKS+L DT++ QR+ + + Sbjct: 4 KSIKIQGARTHNLKDIDIDIPKNKLVVLTGLSGSGKSSLAFDTIYAEGQRRYVESLSSYA 63 Query: 671 APYR------DIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGV 718 + D+ +E I IDQ + PRS T T ++ +R L+A V Sbjct: 64 RQFLGQMDKPDVDVIEGLSPAISIDQKTTSKNPRSTVGTVTEIYDYLRLLYARV 117 Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 42/121 (34%), Positives = 60/121 (49%), Gaps = 15/121 (12%) Query: 3 KIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYAR 62 KIEV GA +NLKN++ IP + VVTG+SGSGKS+L + +Y + A+ Sbjct: 611 KIEVMGASENNLKNVSAKIPIGLMTVVTGVSGSGKSTLVNEIVY-----------KSLAK 659 Query: 63 QFLSLMEKP----DVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEP 118 KP + IE + I I+Q PRS T T + D +R +FA+ E Sbjct: 660 SLYKGKVKPGKHKKIKGIEHIDKVIDIDQSPIGRTPRSNPATYTGVFDDIRDVFAQTNEA 719 Query: 119 R 119 + Sbjct: 720 K 720 >UniRef50_C9KNX7 Excinuclease ABC subunit A n=2 Tax=Bacteria RepID=C9KNX7_9FIRM Length = 944 Score = 1137 bits (2940), Expect = 0.0, Method: Compositional matrix adjust. Identities = 560/942 (59%), Positives = 704/942 (74%), Gaps = 12/942 (1%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 63 I ++GAR HNLKNI++ IPRDKL+V+TGLSGSGKSSLAFDT+YAEGQRRYVESLS+YARQ Sbjct: 5 IRIKGARAHNLKNIDVNIPRDKLVVITGLSGSGKSSLAFDTIYAEGQRRYVESLSSYARQ 64 Query: 64 FLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCPDH 123 FL M+KPDVD I+GLSPAISI+QK+TSHNPRSTVGT+TEI+DYLRLLFAR G P CP Sbjct: 65 FLGQMDKPDVDQIDGLSPAISIDQKTTSHNPRSTVGTVTEIYDYLRLLFARAGHPHCPKC 124 Query: 124 DVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARIDGEV 183 P+ Q+V QM+D + PE +L+++A +++ +KGEH K L ++ +GY+R RIDGEV Sbjct: 125 GKPITQQSVDQMIDQIRELPERTKLLVMAQVVRGKKGEHKKVLAHIRHEGYVRVRIDGEV 184 Query: 184 CDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVADMDDPKAE 243 D+ + +LE KKHTIEVV+DR VR+ + RLA+S ETAL+L G A V +D E Sbjct: 185 MDIGEDIQLEKNKKHTIEVVIDRLVVREGMESRLADSLETALKLGEGVAYVQIVD---GE 241 Query: 244 ELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPELSLA 303 L+FS NFAC CG S+ E+ PR+FSFNNP GACP C GLG FD + V+ +P LS+ Sbjct: 242 LLMFSENFACVDCGISLPEITPRMFSFNNPYGACPVCMGLGSHMEFDEELVLPDPTLSVG 301 Query: 304 GGAIRGWDRRNFYYFQM--LKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKENIEFKYM 361 GG + N + + M +K++ + + +E PW + +V+LYGSG+E F+Y Sbjct: 302 GGVFAPLSK-NLHSYAMCVMKAILEKRGYSLETPWQEIDKKTQQVLLYGSGEERFTFRYT 360 Query: 362 NDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGTRLRREARHV 421 N G+ PFEGV+ + RRY ET+S +RE +++ PC +C G RL+ E V Sbjct: 361 NMFGEDKEYFVPFEGVMPLLARRYHETDSDEMRESYENYMTEIPCKACHGARLKPETLAV 420 Query: 422 YVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTLS 481 V + ++ M+I A FF +L L + KIA +ILKEI RL FL++VGL+YLTLS Sbjct: 421 TVGGKNIDEVTRMTIREADAFFTHLTLTPREMKIAAQILKEIHARLHFLLDVGLDYLTLS 480 Query: 482 RSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTV 541 RSA TLSGGEAQRIRLA+QIG+GL GV+YVLDEPSIGLHQRDN RLL TL HLRDLGNT+ Sbjct: 481 RSAGTLSGGEAQRIRLATQIGSGLQGVLYVLDEPSIGLHQRDNNRLLATLKHLRDLGNTL 540 Query: 542 IVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEVP 601 IVVEHDED + AADH+IDIGPGAG +GG VVAEG E I P+S+TG Y+S ++ I VP Sbjct: 541 IVVEHDEDTMYAADHIIDIGPGAGANGGRVVAEGTAEEIKKNPDSITGAYLSRRKFIPVP 600 Query: 602 KKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFP-IAQR 660 KR P N K +++ GA NNLKD+T+ P+G T +TGVSGSGKSTL+N+ L+ IA R Sbjct: 601 AKRRPGNG-KFIEVVGAAENNLKDLTVKFPLGTLTLVTGVSGSGKSTLVNEILYKGIASR 659 Query: 661 QLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPE 720 + +P ++ I+GLE+ DK+IDIDQ PIGRTPRSNPATYTGVF +RELF+ E Sbjct: 660 LYHAK--GKPGKHKKIKGLENIDKIIDIDQQPIGRTPRSNPATYTGVFDAIRELFSQTSE 717 Query: 721 SRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKY 780 +R RGY GRFSFNV+GGRCEAC+GDG++K+EMHFLPD+YVPC+ CKG RYNRETLE++Y Sbjct: 718 ARMRGYKAGRFSFNVKGGRCEACKGDGILKIEMHFLPDVYVPCEVCKGARYNRETLEVRY 777 Query: 781 KGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKL 840 KGK I EVLDMTI+EA EFF VP +ARKLQ + DVGL YI+LGQ ATTLSGGEAQRVKL Sbjct: 778 KGKNISEVLDMTIDEAVEFFANVPRIARKLQIIQDVGLGYIKLGQPATTLSGGEAQRVKL 837 Query: 841 ARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADW 900 A ELS+R TG+TLYILDEPTTGLH ADI +LLD+L +L G+T+VVIEHNLDVIKTAD+ Sbjct: 838 ATELSRRSTGKTLYILDEPTTGLHTADIHKLLDILQRLVAGGDTVVVIEHNLDVIKTADY 897 Query: 901 IVDLGPEGGSGGGEILVSGTPE--TVAECEASHTARFLKPML 940 I+DLGPEGG GG ++ +G PE + + AS+T +FL+P+L Sbjct: 898 IIDLGPEGGDKGGTVVATGRPEDIVIVKVPASYTGKFLRPLL 939 Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 37/113 (32%), Positives = 59/113 (52%), Gaps = 6/113 (5%) Query: 610 EKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAE 669 EK +++ GAR +NLK++ + +P ITG+SGSGKS+L DT++ QR+ + + Sbjct: 2 EKYIRIKGARAHNLKNIDVNIPRDKLVVITGLSGSGKSSLAFDTIYAEGQRRYVESLSSY 61 Query: 670 PAPYR------DIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFA 716 + D+ ++ I IDQ PRS T T ++ +R LFA Sbjct: 62 ARQFLGQMDKPDVDQIDGLSPAISIDQKTTSHNPRSTVGTVTEIYDYLRLLFA 114 >UniRef50_Q2YPX5 UvrABC system protein A n=164 Tax=root RepID=UVRA_BRUA2 Length = 974 Score = 1132 bits (2929), Expect = 0.0, Method: Compositional matrix adjust. Identities = 577/962 (59%), Positives = 729/962 (75%), Gaps = 31/962 (3%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 63 I +RGAR HNLKN++L +PRDKLIV+TGLSGSGKSSLAFDT+YAEGQRRYVESLSAYARQ Sbjct: 7 ISIRGAREHNLKNVDLDLPRDKLIVMTGLSGSGKSSLAFDTIYAEGQRRYVESLSAYARQ 66 Query: 64 FLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCPDH 123 FL +M+KPDVD I+GLSPAISIEQK+TS NPRSTVGT+TEI+DY+RLLFARVG P P Sbjct: 67 FLEMMQKPDVDQIDGLSPAISIEQKTTSRNPRSTVGTVTEIYDYMRLLFARVGIPYSPAT 126 Query: 124 DVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARIDGEV 183 +P+ +QTVSQMVD V++ EG RL +LAPI++ RKGE+ K L L +G+ R ++DG Sbjct: 127 GLPIESQTVSQMVDRVIALEEGTRLYILAPIVRGRKGEYRKELAELQKKGFQRVKVDGTF 186 Query: 184 CDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVADMDDP--- 240 +++D P L+ + KH I+VVVDR VR DL+ RLA+S ET L+L+ G A+ D P Sbjct: 187 YEIADVPPLDKKYKHDIDVVVDRVVVRPDLSTRLADSLETCLKLADGLAIAEFADKPLPV 246 Query: 241 ---------------KAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGV 285 E +LFS FACP+ G+++ E+EPRLFSFNNP GACPTCDGLG Sbjct: 247 GETAEGGSANKSANETHERILFSEKFACPVSGFTIPEIEPRLFSFNNPFGACPTCDGLGT 306 Query: 286 QQYFDPDRVIQNPELSLAGGAIRGWDRRNF-YYFQMLKSLADHYKFDVEAPWGSLSANVH 344 QQ DP+ +I + +L GA+ W R + YY Q L++L Y F V A W LS Sbjct: 307 QQAIDPNLIIPDESAALKDGAVAPWARSSSPYYNQTLEALGKAYGFKVSARWSELSEEAR 366 Query: 345 KVVLYGSGKENIEFKYMNDRGDTSIRRH----PFEGVLHNMERRYKETESSAVREELAKF 400 + +LYG+ I F Y D +R + PFEGV+ N+ERR+KET+S+ REE+ +F Sbjct: 367 QAILYGTKGREITFHY-----DDGLRSYQTTKPFEGVIPNLERRWKETDSAWSREEIERF 421 Query: 401 ISNRPCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNL--KLAGQRAKIAEK 458 +++ PC +C G RL+ EA V + + I++MSI A +F ++ ++ +IA + Sbjct: 422 MASTPCPACNGYRLKPEALSVKIGKKHIGEITEMSIRKADAWFRDIDGSFNEKQREIAAR 481 Query: 459 ILKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIG 518 ILK I +RL+FL NVGL+YLTL+R++ TLSGGE+QRIRLASQIG+GL GV+YVLDEPSIG Sbjct: 482 ILKAIRERLQFLNNVGLDYLTLARNSGTLSGGESQRIRLASQIGSGLTGVLYVLDEPSIG 541 Query: 519 LHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLE 578 LHQRDN RLL TL HLRDLGNTVIVVEHDEDAI AD+V+DIGP AGVHGG+V+A+G + Sbjct: 542 LHQRDNARLLDTLRHLRDLGNTVIVVEHDEDAILTADYVVDIGPAAGVHGGKVIAQGSPQ 601 Query: 579 AIMAVPESLTGQYMSGKRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCI 638 IMA SLTG+Y+SG ++ VP +R + K L++ GARGNNLK+V+ +P+G FT + Sbjct: 602 DIMANTNSLTGKYLSGAMEVAVPAERRKISKTKRLRVVGARGNNLKNVSADIPLGTFTAV 661 Query: 639 TGVSGSGKSTLINDTLFPIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPR 698 TGVSG GKST + +TLF A R++ G+ PA + I+GLE DKVIDIDQSPIGRTPR Sbjct: 662 TGVSGGGKSTFLIETLFKAASRRIMGSR-EHPAEHDRIEGLEFLDKVIDIDQSPIGRTPR 720 Query: 699 SNPATYTGVFTPVRELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPD 758 SNPATYTG FTP+R+ FAG+PE++ARGY PGRFSFNV+GGRCEACQGDGVIK+EMHFLPD Sbjct: 721 SNPATYTGAFTPIRDWFAGLPEAKARGYQPGRFSFNVKGGRCEACQGDGVIKIEMHFLPD 780 Query: 759 IYVPCDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGL 818 +YV CD C GKRYNRETL++ +KGK+I +VLDMT+EE EFF AVPA+ KL+TL+ VGL Sbjct: 781 VYVTCDVCHGKRYNRETLDVLFKGKSIADVLDMTVEEGAEFFSAVPAVRDKLETLVKVGL 840 Query: 819 TYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKL 878 YI++GQ ATTLSGGEAQRVKLA+ELS+R TG+TLYILDEPTTGLHF D+ +LL+VLH+L Sbjct: 841 GYIKVGQQATTLSGGEAQRVKLAKELSRRATGRTLYILDEPTTGLHFHDVAKLLEVLHEL 900 Query: 879 RDQGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLKP 938 +QGNT+VVIEHNL+VIKTADW++DLGPEGG GGGEI+ G PE + + + S+T +FLK Sbjct: 901 VEQGNTVVVIEHNLEVIKTADWVIDLGPEGGDGGGEIVAVGRPEDIVQEKRSYTGQFLKE 960 Query: 939 ML 940 +L Sbjct: 961 LL 962 Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 59/197 (29%), Positives = 90/197 (45%), Gaps = 23/197 (11%) Query: 610 EKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIA- 668 +K + + GAR +NLK+V L LP +TG+SGSGKS+L DT++ QR+ + A Sbjct: 4 QKFISIRGAREHNLKNVDLDLPRDKLIVMTGLSGSGKSSLAFDTIYAEGQRRYVESLSAY 63 Query: 669 -----EPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFA--GVPES 721 E D+ ++ I I+Q R PRS T T ++ +R LFA G+P S Sbjct: 64 ARQFLEMMQKPDVDQIDGLSPAISIEQKTTSRNPRSTVGTVTEIYDYMRLLFARVGIPYS 123 Query: 722 RARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKYK 781 A G + + D VI +E I P + + Y +E E++ K Sbjct: 124 PATGLPI--------ESQTVSQMVDRVIALEEGTRLYILAPIVRGRKGEYRKELAELQKK 175 Query: 782 G-------KTIHEVLDM 791 G T +E+ D+ Sbjct: 176 GFQRVKVDGTFYEIADV 192 Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 39/118 (33%), Positives = 56/118 (47%), Gaps = 7/118 (5%) Query: 3 KIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYAR 62 ++ V GAR +NLKN++ IP VTG+SG GKS+ +TL+ RR + S A Sbjct: 635 RLRVVGARGNNLKNVSADIPLGTFTAVTGVSGGGKSTFLIETLFKAASRRIMGSREHPA- 693 Query: 63 QFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRC 120 E ++ +E L I I+Q PRS T T +R FA + E + Sbjct: 694 ------EHDRIEGLEFLDKVIDIDQSPIGRTPRSNPATYTGAFTPIRDWFAGLPEAKA 745 >UniRef50_Q5HHQ9 UvrABC system protein A n=172 Tax=cellular organisms RepID=UVRA_STAAC Length = 948 Score = 1126 bits (2913), Expect = 0.0, Method: Compositional matrix adjust. Identities = 546/938 (58%), Positives = 722/938 (76%), Gaps = 6/938 (0%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 63 I V+GAR HNLK+I++ +P++KLIV+TGLSGSGKSSLAFDT+YAEGQRRYVESLSAYARQ Sbjct: 6 IVVKGARAHNLKDIDIELPKNKLIVMTGLSGSGKSSLAFDTIYAEGQRRYVESLSAYARQ 65 Query: 64 FLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCPDH 123 FL M+KPDVD IEGLSPAISI+QK+TS NPRSTV T+TEI+DY+RLL+ARVG+P CP+H Sbjct: 66 FLGQMDKPDVDTIEGLSPAISIDQKTTSKNPRSTVATVTEIYDYIRLLYARVGKPYCPNH 125 Query: 124 DVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARIDGEV 183 ++ + +QTV QMVD ++ ++ LLAP+I RKG H K +E++ +GY+R RIDGE+ Sbjct: 126 NIEIESQTVQQMVDRIMELEARTKIQLLAPVIAHRKGSHEKLIEDIGKKGYVRLRIDGEI 185 Query: 184 CDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVADMDDPKAE 243 D++D P L+ K HTIEVVVDR V+D + RLA+S ETALELS G V +D E Sbjct: 186 VDVNDVPTLDKNKNHTIEVVVDRLVVKDGIETRLADSIETALELSEGQLTVDVID---GE 242 Query: 244 ELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPELSLA 303 +L FS + ACPICG+S+ ELEPR+FSFN+P GACPTCDGLG + D D V+ + + +L Sbjct: 243 DLKFSESHACPICGFSIGELEPRMFSFNSPFGACPTCDGLGQKLTVDVDLVVPDKDKTLN 302 Query: 304 GGAIRGW-DRRNFYYFQMLKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKENIEFKYMN 362 GAI W + +Y +LK + + YK +++ P+ L+ ++LYGSG + IEF + Sbjct: 303 EGAIEPWIPTSSDFYPTLLKRVCEVYKINMDKPFKKLTERQRDILLYGSGDKEIEFTFTQ 362 Query: 363 DRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGTRLRREARHVY 422 +G T R FEGV+ N+ RR+ E+ S RE ++K+++ PC +C G RL REA VY Sbjct: 363 RQGGTRKRTMVFEGVVPNISRRFHESPSEYTREMMSKYMTELPCETCHGKRLSREALSVY 422 Query: 423 VENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTLSR 482 V + + + SI A+ ++ N+ L+ Q IA +ILKEI RL FL NVGL YLTL+R Sbjct: 423 VGGLNIGEVVEYSISQALNYYKNIDLSEQDQAIANQILKEIISRLTFLNNVGLEYLTLNR 482 Query: 483 SAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVI 542 ++ TLSGGEAQRIRLA+QIG+ L GV+YVLDEPSIGLHQRDN+RL+ TL +RDLGNT+I Sbjct: 483 ASGTLSGGEAQRIRLATQIGSRLTGVLYVLDEPSIGLHQRDNDRLINTLKEMRDLGNTLI 542 Query: 543 VVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEVPK 602 VVEHD+D +RAAD+++DIGPGAG HGG++V+ G + +M +SLTGQY+SGK++IEVP+ Sbjct: 543 VVEHDDDTMRAADYLVDIGPGAGEHGGQIVSSGTPQKVMKDKKSLTGQYLSGKKRIEVPE 602 Query: 603 KRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQL 662 R PA+ K+ + GAR NNLK V + +P+ + T +TGVSGSGKS+L+N+ L+ +++ Sbjct: 603 YRRPASDRKI-SIRGARSNNLKGVDVDIPLSIMTVVTGVSGSGKSSLVNEVLYKSLAQKI 661 Query: 663 NGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESR 722 N + + +P Y I+G++ DK+IDIDQSPIGRTPRSNPATYTGVF +R++FA E++ Sbjct: 662 NKSKV-KPGLYDKIEGIDQLDKIIDIDQSPIGRTPRSNPATYTGVFDDIRDVFAQTNEAK 720 Query: 723 ARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKYKG 782 RGY GRFSFNV+GGRCEAC+GDG+IK+EMHFLPD+YVPC+ C GKRYNRETLE+ YKG Sbjct: 721 IRGYQKGRFSFNVKGGRCEACKGDGIIKIEMHFLPDVYVPCEVCDGKRYNRETLEVTYKG 780 Query: 783 KTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLAR 842 K I ++L+MT+EEA +FF+ +P + RKLQTL+DVGL Y+ LGQ ATTLSGGEAQRVKLA Sbjct: 781 KNIADILEMTVEEATQFFENIPKIKRKLQTLVDVGLGYVTLGQQATTLSGGEAQRVKLAS 840 Query: 843 ELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADWIV 902 EL KR TG+++YILDEPTTGLH DI +LL VL++L + G+T+V+IEHNLDVIKTAD+I+ Sbjct: 841 ELHKRSTGKSIYILDEPTTGLHVDDISRLLKVLNRLVENGDTVVIIEHNLDVIKTADYII 900 Query: 903 DLGPEGGSGGGEILVSGTPETVAECEASHTARFLKPML 940 DLGPEGGSGGG I+ +GTPE +A+ ++S+T ++LK +L Sbjct: 901 DLGPEGGSGGGTIVATGTPEDIAQTKSSYTGKYLKEVL 938 Score = 69.3 bits (168), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 46/121 (38%), Positives = 65/121 (53%), Gaps = 15/121 (12%) Query: 3 KIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYAR 62 KI +RGAR++NLK +++ IP + VVTG+SGSGKSSL + LY + A+ Sbjct: 611 KISIRGARSNNLKGVDVDIPLSIMTVVTGVSGSGKSSLVNEVLY-----------KSLAQ 659 Query: 63 QFLSLMEKPDV-DHIEG---LSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEP 118 + KP + D IEG L I I+Q PRS T T + D +R +FA+ E Sbjct: 660 KINKSKVKPGLYDKIEGIDQLDKIIDIDQSPIGRTPRSNPATYTGVFDDIRDVFAQTNEA 719 Query: 119 R 119 + Sbjct: 720 K 720 Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 42/116 (36%), Positives = 61/116 (52%), Gaps = 8/116 (6%) Query: 609 PEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIA 668 P V+K GAR +NLKD+ + LP +TG+SGSGKS+L DT++ QR+ + A Sbjct: 4 PSIVVK--GARAHNLKDIDIELPKNKLIVMTGLSGSGKSSLAFDTIYAEGQRRYVESLSA 61 Query: 669 EPAPYR------DIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGV 718 + D+ +E I IDQ + PRS AT T ++ +R L+A V Sbjct: 62 YARQFLGQMDKPDVDTIEGLSPAISIDQKTTSKNPRSTVATVTEIYDYIRLLYARV 117 >UniRef50_Q8UF86 UvrABC system protein A n=78 Tax=cellular organisms RepID=UVRA_AGRT5 Length = 973 Score = 1114 bits (2882), Expect = 0.0, Method: Compositional matrix adjust. Identities = 565/962 (58%), Positives = 728/962 (75%), Gaps = 26/962 (2%) Query: 1 MDKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAY 60 + I +RGAR HNLK I+L +PR+KLIV+TGLSGSGKSSLAFDT+YAEGQRRYVESLSAY Sbjct: 4 LKTISIRGAREHNLKGIDLDLPRNKLIVMTGLSGSGKSSLAFDTIYAEGQRRYVESLSAY 63 Query: 61 ARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRC 120 ARQFL +M+KPDVD I+GLSPAISIEQK+TS NPRSTVGT+TEI+DY+RLLFARVG P Sbjct: 64 ARQFLEMMQKPDVDQIDGLSPAISIEQKTTSRNPRSTVGTVTEIYDYMRLLFARVGVPYS 123 Query: 121 PDHDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARID 180 P +P+ +QTVSQMVD +L+ EG RL +LAPI++ RKGE+ K L L +G+ R ++D Sbjct: 124 PATGLPIESQTVSQMVDRILAFEEGTRLYILAPIVRGRKGEYKKELAELMKKGFQRVKVD 183 Query: 181 GEVCDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVADMDDP 240 G+ +++D P L+ + KH I+VVVDR VR D+ RLA+S ET L+L+ G A+ D P Sbjct: 184 GQFYEIADVPALDKKYKHDIDVVVDRAVVRPDMAARLADSLETCLKLADGLAIAEFADKP 243 Query: 241 ------------------KAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDG 282 E +LFS FACP+ G+++ E+EPRLFSFNNP GACP+CDG Sbjct: 244 LPPEDTAAGGSANKSLNETHERVLFSEKFACPVSGFTIPEIEPRLFSFNNPFGACPSCDG 303 Query: 283 LGVQQYFDPDRVIQNPELSLAGGAIRGWDRRNF-YYFQMLKSLADHYKFDVEAPWGSLSA 341 LG QQ D + ++ P +L GAI W + + YY Q L++L + F + + W LS Sbjct: 304 LGSQQKVDENLIVPEPARTLRDGAIAPWAKSSSPYYNQTLEALGKAFGFKLSSKWTDLSK 363 Query: 342 NVHKVVLYGSGKENIEFKYMND-RGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKF 400 +L G+ + IEF Y + R +++ FEG++ N+ERR+KET+S+ REE+ ++ Sbjct: 364 EAQHAILQGT-DDKIEFNYQDGARSYKTVKN--FEGIVPNLERRWKETDSAWAREEIERY 420 Query: 401 ISNRPCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNL--KLAGQRAKIAEK 458 +S PC +C G RL+ EA V + + ++ MSI A ++F L L ++ +IA + Sbjct: 421 MSAAPCPACAGYRLKPEALAVKINKLHIGEVTQMSIRKARDWFEVLPENLNAKQNEIAVR 480 Query: 459 ILKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIG 518 ILKEI +RL+FL +VGL+YL+LSR++ TLSGGE+QRIRLASQIG+GL GV+YVLDEPSIG Sbjct: 481 ILKEIRERLRFLNDVGLDYLSLSRNSGTLSGGESQRIRLASQIGSGLTGVLYVLDEPSIG 540 Query: 519 LHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLE 578 LHQRDN RLL TL HLRD+GNTVIVVEHDEDAI AD+V+DIGP AG+HGG+V+AEG + Sbjct: 541 LHQRDNARLLETLKHLRDIGNTVIVVEHDEDAILTADYVVDIGPAAGIHGGQVIAEGTPQ 600 Query: 579 AIMAVPESLTGQYMSGKRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCI 638 +MA P+SLTG+Y+SG+ + VP +R + +K+ GARGNNL++VT +P+G+FT + Sbjct: 601 DVMANPKSLTGKYLSGELGVAVPAERRKPKKGREIKVFGARGNNLQNVTAAVPLGVFTAV 660 Query: 639 TGVSGSGKSTLINDTLFPIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPR 698 TGVSG GKST + +TL+ A R++ GA PA + I G E DKVIDIDQSPIGRTPR Sbjct: 661 TGVSGGGKSTFLIETLYKSAARRVMGAR-EIPAEHDRIDGFEFIDKVIDIDQSPIGRTPR 719 Query: 699 SNPATYTGVFTPVRELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPD 758 SNPATYTG FTP+R+ FAG+PE++ARGY PGRFSFNV+GGRCEACQGDGVIK+EMHFLPD Sbjct: 720 SNPATYTGAFTPIRDWFAGLPEAKARGYAPGRFSFNVKGGRCEACQGDGVIKIEMHFLPD 779 Query: 759 IYVPCDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGL 818 +YV CD C GKRYNRETL++ +KGK+I +VLDMT+EE EFF AVPA+ KLQ+L DVGL Sbjct: 780 VYVTCDVCHGKRYNRETLDVTFKGKSIADVLDMTVEEGVEFFAAVPAVRDKLQSLFDVGL 839 Query: 819 TYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKL 878 YI++GQ A TLSGGEAQRVKLA+ELSKR TG+TLYILDEPTTGLHF D+ +LL++LH L Sbjct: 840 GYIKVGQQANTLSGGEAQRVKLAKELSKRSTGRTLYILDEPTTGLHFHDVNKLLEMLHAL 899 Query: 879 RDQGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLKP 938 +QGN++VVIEHNL+VIKTADWI+D+GPEGG+GGGE++ +GTPE + + E S+T FLK Sbjct: 900 VEQGNSVVVIEHNLEVIKTADWIIDIGPEGGTGGGEVVATGTPEDIVKVERSYTGHFLKE 959 Query: 939 ML 940 +L Sbjct: 960 LL 961 >UniRef50_O26543 UvrABC system protein A n=86 Tax=cellular organisms RepID=UVRA_METTH Length = 962 Score = 1104 bits (2855), Expect = 0.0, Method: Compositional matrix adjust. Identities = 559/945 (59%), Positives = 716/945 (75%), Gaps = 14/945 (1%) Query: 3 KIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYAR 62 KI ++GAR HNL+N++L +PRDK IV+TG+SGSGKSSLAFDT+YAEGQRRYVESLSAYAR Sbjct: 10 KIVIKGAREHNLQNVDLELPRDKFIVITGISGSGKSSLAFDTIYAEGQRRYVESLSAYAR 69 Query: 63 QFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCPD 122 QFL M+KP++D+IEGLSPAISI+QK+T NPRSTVGTITEI+DYLRLLFAR+G+P C Sbjct: 70 QFLGQMKKPEMDYIEGLSPAISIDQKTTRVNPRSTVGTITEIYDYLRLLFARIGKPHCYL 129 Query: 123 HDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARIDGE 182 + QT +Q+VD ++ EG+R+++LAP++++RKGEH + E L QG++R R+DGE Sbjct: 130 CGREIEQQTSTQIVDRIMDDGEGERIIILAPVVRDRKGEHQRVFERLREQGFVRVRVDGE 189 Query: 183 VCDLSDPPKLELQKKHTIEVVVDRFKVR--DDLTQRLAESFETALELSGGTAVVADMDDP 240 + DL D L+ +KH+I+VVVDR VR + +RLA+S ETAL+L GT V P Sbjct: 190 IHDLEDEFDLDRNRKHSIDVVVDRLVVRRDTEFRKRLADSVETALQLGEGTVRVPSTMTP 249 Query: 241 KAEELLFSANFACP-ICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPE 299 EE ++S +FACP G + E+ PR+FSFN+P GACP C+GLG + DPD V+ PE Sbjct: 250 -GEERIYSEHFACPGTAGINFEEISPRMFSFNSPHGACPECNGLGSKLEIDPDLVVPYPE 308 Query: 300 LSLAGGAIRGWDR---RNFYYFQMLKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKENI 356 S+ GAI W + R+ YY QML+++A+HY F ++ P+ L + +LYG+ E I Sbjct: 309 RSINEGAIVPWSKSGKRDNYYHQMLRAVAEHYGFSLDTPFRDLDEEHRRAILYGT-DEKI 367 Query: 357 EFKYMNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGTRLRR 416 +F + + R FEGV+ MER Y ET+S+ +R + +F+SN C C G+RLR Sbjct: 368 QFVFQRKNRTYRVNRR-FEGVIPRMERIYMETKSNYMRTYIGRFMSNHACPVCGGSRLRP 426 Query: 417 EARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNVGLN 476 E+ V + + + +MSI A EFF++LKL + IA ++LKEI +RL+FL++VGL+ Sbjct: 427 ESLSVTINGRSIHDVVEMSIREAHEFFDSLKLTEREEYIAREVLKEIRERLRFLIDVGLD 486 Query: 477 YLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRD 536 YLTLSRS+ TLSGGEAQRIRLA+QIG+GLVGV+Y+LDEPSIGLHQRDN RL+ TL LRD Sbjct: 487 YLTLSRSSGTLSGGEAQRIRLATQIGSGLVGVLYILDEPSIGLHQRDNRRLIETLKRLRD 546 Query: 537 LGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKR 596 LGNT+IVVEHDE+ I +ADHV+DIGPGAG HGG VVAEG E IM P+SLTG Y+SG+ Sbjct: 547 LGNTLIVVEHDEETILSADHVVDIGPGAGEHGGCVVAEGTPEEIMEDPDSLTGAYLSGRE 606 Query: 597 KIEVPK-KRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLF 655 I +P+ +R P+ + L + GA NNL+++ + +P+GLFTC+TGVSGSGKSTL+ND L+ Sbjct: 607 TIPLPEVRRRPSG--RYLTVRGAAENNLREIDVRIPLGLFTCVTGVSGSGKSTLVNDILY 664 Query: 656 PIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELF 715 +LN + + DI+GL+H DKV+ IDQSPIGRTPRSNPATYTGVFT +RELF Sbjct: 665 RGVYERLNHKHM-NAGRHTDIEGLQHIDKVVMIDQSPIGRTPRSNPATYTGVFTHIRELF 723 Query: 716 AGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRET 775 A PE+R RGY PGRFSFNV+GGRCEAC GDG+IK+EMHFL D+YVPC+ C+G+RYN ET Sbjct: 724 AQTPEARKRGYRPGRFSFNVKGGRCEACGGDGIIKIEMHFLADVYVPCEVCRGRRYNEET 783 Query: 776 LEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEA 835 LEI+Y+G+ I EVLDMT+EEA EFF+ +P + RKLQTL DVGL YI+LGQ ATTLSGGEA Sbjct: 784 LEIRYRGRNIAEVLDMTVEEALEFFENIPQVRRKLQTLYDVGLGYIKLGQPATTLSGGEA 843 Query: 836 QRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVI 895 QRVKLA+ELS+R TG TLYILDEPTTGLHF DI++LL+VL +L D GNT VVIEHNLDVI Sbjct: 844 QRVKLAKELSRRSTGSTLYILDEPTTGLHFDDIKKLLNVLGRLVDAGNTAVVIEHNLDVI 903 Query: 896 KTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLKPML 940 K+AD I+DLGPEGG GG ++ GTPE VA +HT RFL+ +L Sbjct: 904 KSADHIIDLGPEGGERGGLVVAEGTPEEVA-ASGTHTGRFLREVL 947 >UniRef50_Q71WU0 UvrABC system protein A n=44 Tax=Bacteria RepID=UVRA_LISMF Length = 956 Score = 1100 bits (2845), Expect = 0.0, Method: Compositional matrix adjust. Identities = 550/941 (58%), Positives = 715/941 (75%), Gaps = 7/941 (0%) Query: 2 DKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYA 61 +KI ++GAR HNLKNI++ IPRDKL+V+TGLSGSGKSSLAFDT+YAEGQRRYVESLSAYA Sbjct: 4 EKIVIQGARAHNLKNIDVEIPRDKLVVMTGLSGSGKSSLAFDTIYAEGQRRYVESLSAYA 63 Query: 62 RQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCP 121 RQFL M+KPDVD IEGLSPAISI+QK+TS NPRSTVGT+TEIHDYLRLL+ARVG P CP Sbjct: 64 RQFLGQMDKPDVDLIEGLSPAISIDQKTTSRNPRSTVGTVTEIHDYLRLLYARVGHPVCP 123 Query: 122 DHDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARIDG 181 +H + + +QT+ QMVD VL PE R+ ++API+ +KG H KT+E + +GY+R R+DG Sbjct: 124 NHGIEITSQTIEQMVDRVLEYPEKTRIQIMAPIVSGKKGTHKKTIEEIKKEGYVRIRVDG 183 Query: 182 EVCDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVADMDDPK 241 E+ D++D ++E KKH+IE+++DR +++ + RL +S E AL L+ G AVV M D Sbjct: 184 EIYDINDEIEIEKNKKHSIEIIIDRIVIKEGINTRLYDSIEAALRLADGYAVVDIMGD-- 241 Query: 242 AEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPELS 301 +ELLFS ++ACP CG+S+ ELEPR+FSFN+P GACPTCDGLG + D D VI + LS Sbjct: 242 -KELLFSEHYACPYCGFSVGELEPRMFSFNSPFGACPTCDGLGTKLEVDVDTVIPDRSLS 300 Query: 302 LAGGAIRGWDR-RNFYYFQMLKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKENIEFKY 360 L GAI W + YY QML S + D++ P L+ ++L GS + F+Y Sbjct: 301 LNEGAIIPWRPISSQYYPQMLASACKEFGIDMDTPLEKLTKEELDIILNGSKDKEFYFEY 360 Query: 361 MNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGTRLRREARH 420 ND G T PFEG+L N+ERRY+ET S R+++A+++++ PC SC+G RL+ E Sbjct: 361 KNDFGMTRETWIPFEGILPNIERRYRETNSDFTRDQMAQYMTDLPCPSCKGYRLKEETLS 420 Query: 421 VYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTL 480 V V N + IS+ SI A++FF+ L+L+ + +IA I KE+ RL FL NVGL+YLT+ Sbjct: 421 VKVNNHHIGQISEFSINEALDFFDGLELSEKETQIAAPIFKEVRARLGFLKNVGLDYLTM 480 Query: 481 SRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNT 540 SR+A TLSGGEAQRIRLA+QIG+ L GV+Y+LDEPSIGLHQRDN+RL+ TL +RD+GNT Sbjct: 481 SRAAGTLSGGEAQRIRLATQIGSRLTGVLYILDEPSIGLHQRDNDRLISTLQSMRDIGNT 540 Query: 541 VIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEV 600 +IVVEHDED + AAD++IDIGPGAG HGG +VA G E + S+TG Y+SGK+ I V Sbjct: 541 LIVVEHDEDTMMAADYLIDIGPGAGEHGGRIVAAGTPEEVAKNKNSITGDYLSGKKFIPV 600 Query: 601 PKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQR 660 P KR N + L++ GA+ NNLK+V +P+ F+C+TGVSGSGKS+L+N+ L R Sbjct: 601 PAKRRKGNGLE-LEIIGAKANNLKNVNAKIPLATFSCVTGVSGSGKSSLVNEVLRKALAR 659 Query: 661 QLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPE 720 +LN A+P +++I+G+E+ +K+I+IDQSPIGRTPRSNPATYTG F +R+LFA E Sbjct: 660 KLN-RNHAKPGEHKEIKGIENLEKIINIDQSPIGRTPRSNPATYTGAFDDIRDLFASTNE 718 Query: 721 SRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKY 780 ++ RGY GRFSFNV+GGRCEAC+GDG+IK+EMHFLPD+YVPC+ C GKRYN ETL+I+Y Sbjct: 719 AKVRGYKKGRFSFNVKGGRCEACKGDGIIKIEMHFLPDVYVPCEVCHGKRYNGETLDIRY 778 Query: 781 KGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKL 840 KGK I EVL+MT+EE E+F P +ARKLQT++DVGL YIRLGQ ATTLSGGEAQRVKL Sbjct: 779 KGKNIAEVLEMTVEEGLEYFTNQPRIARKLQTIVDVGLGYIRLGQPATTLSGGEAQRVKL 838 Query: 841 ARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKL-RDQGNTIVVIEHNLDVIKTAD 899 A EL KR G++ YILDEPTTGLH DI +LL VL +L + G+T++VIEHNLDVIK AD Sbjct: 839 ASELHKRSNGKSFYILDEPTTGLHADDIGRLLKVLQRLVEENGDTVLVIEHNLDVIKQAD 898 Query: 900 WIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLKPML 940 +++DLGPEGG GGG+I+ +GTPE +A + S+T ++LKP+L Sbjct: 899 YLIDLGPEGGDGGGQIIATGTPEKIARSKKSYTGKYLKPIL 939 >UniRef50_Q56242 UvrABC system protein A n=60 Tax=cellular organisms RepID=UVRA_THET8 Length = 952 Score = 1098 bits (2839), Expect = 0.0, Method: Compositional matrix adjust. Identities = 553/945 (58%), Positives = 705/945 (74%), Gaps = 17/945 (1%) Query: 1 MDKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAY 60 MD+I +RGAR HNLKNI+L +PR K IV+TG+SGSGKS+LAFDT+YAEGQRRYVESLS+Y Sbjct: 1 MDRIVIRGAREHNLKNISLELPRGKFIVITGVSGSGKSTLAFDTIYAEGQRRYVESLSSY 60 Query: 61 ARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRC 120 ARQFL +M+KP+V+ IEGLSPAISI+QK+TSHNPRSTVGT+TEIHDYLRLLFARVG+ C Sbjct: 61 ARQFLGVMDKPEVESIEGLSPAISIDQKTTSHNPRSTVGTVTEIHDYLRLLFARVGQAFC 120 Query: 121 PDHDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARID 180 P+ P+ Q+ S++ D +L +P G R +L+AP+++ RKGE+ K + L +GY R R+D Sbjct: 121 PECGRPIEKQSASEITDRLLKRPPGTRAILMAPLVRGRKGEYRKLFQQLLKEGYARVRVD 180 Query: 181 GEVCDLSDPPKLELQK--KHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVADMD 238 G + L + L L+K KH I++V+DR ++++ R+AE+ E AL G V D Sbjct: 181 GVIYLLEEAQGLSLEKYEKHDIDLVIDRVVLKEEERPRIAEAVELALLRGEGLLRVLYPD 240 Query: 239 DPKAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNP 298 EE LFS FACP G + ELEPR+FSFN+P GACP C GLG +Q FDP+ V+ NP Sbjct: 241 --TGEEELFSEKFACPEHGSVLEELEPRIFSFNSPYGACPACSGLGYRQEFDPELVV-NP 297 Query: 299 ELSLAGGAIRGWDRRN----FYYFQMLKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKE 354 ELSLA GAI W R Y + L++LA+H FD++ P+ L + VLYG E Sbjct: 298 ELSLAEGAILPWSRGRDTGRSYLWDRLRALAEHLGFDLKTPFKDLPEEAKRAVLYGL-PE 356 Query: 355 NIEFKYMNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGTRL 414 E + +T +EGV+ +E+RY+E++S VRE L F+S RPC +C GTR Sbjct: 357 PFEVVFRRGGKETFRVEVRYEGVIPWLEKRYQESDSEGVREALEGFMSLRPCPACGGTRY 416 Query: 415 RREARHVYVENTPLPAISDMSIGHAMEFFNNLK--LAGQRAKIAEKILKEIGDRLKFLVN 472 +RE V V + +S + + A+ FF L+ L +A+IA IL+EI +RL FLV+ Sbjct: 417 KREVLSVKVAGRNIAEVSALPVREALAFFQGLEKTLPPFQAQIARPILREIVERLGFLVD 476 Query: 473 VGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLI 532 VGL+YLTL R+A TLSGGEAQRIRLA+Q+G+GL GV+YVLDEPSIGLH RDN+RL+ TL Sbjct: 477 VGLDYLTLDRAANTLSGGEAQRIRLATQVGSGLTGVLYVLDEPSIGLHPRDNQRLIRTLK 536 Query: 533 HLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYM 592 LRDLGNT+IVVEHDE+ +RAAD ++D+GPGAG+HGGEVVA+G LE I+ P+SLTG Y+ Sbjct: 537 RLRDLGNTLIVVEHDEETMRAADWIVDMGPGAGIHGGEVVAQGTLEDILKSPQSLTGAYL 596 Query: 593 SGKRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLIND 652 G+++I VPK+R N K L L GAR +NLK+VTL +P+G F ITG SGSGKSTL++D Sbjct: 597 RGEKRIPVPKERRKGN-GKWLVLKGARAHNLKNVTLRIPLGRFVAITGPSGSGKSTLVHD 655 Query: 653 TLFP-IAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPV 711 L+ +AQR + T P PY ++G+EH DKVI+IDQSPIGRTPRSNPATYTGVF + Sbjct: 656 VLYAALAQRLMRAKTT--PGPYEALEGVEHLDKVIEIDQSPIGRTPRSNPATYTGVFDEI 713 Query: 712 RELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRY 771 R+LFA PE+R RGY PGRFSFNV+GGRCEAC GDG +K+EM FLPD+YVPC+ CKGKRY Sbjct: 714 RDLFAKTPEARKRGYGPGRFSFNVKGGRCEACGGDGTVKIEMLFLPDLYVPCEVCKGKRY 773 Query: 772 NRETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLS 831 N+ETLE+K +GK+I +VLDMT+EEA +FF VP++ARKLQ ++DVGL Y++LGQ + TLS Sbjct: 774 NKETLEVKLRGKSIADVLDMTVEEALDFFQNVPSIARKLQLMVDVGLGYMKLGQPSPTLS 833 Query: 832 GGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHN 891 GGEAQR+KLA EL ++ TG+TLYILDEPTTGLHF D+ +LL VLH+L D GNT+VVIEHN Sbjct: 834 GGEAQRIKLATELGRKATGRTLYILDEPTTGLHFDDVAKLLSVLHRLVDAGNTVVVIEHN 893 Query: 892 LDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFL 936 LDV+KTADW++DLGPEGG GGEI+ GTPE VA S T FL Sbjct: 894 LDVVKTADWVIDLGPEGGDRGGEIVAEGTPEEVA-LTGSPTGAFL 937 Score = 153 bits (387), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 83/192 (43%), Positives = 115/192 (59%), Gaps = 17/192 (8%) Query: 762 PCDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFD-------------AVPAL-- 806 PC C G RY RE L +K G+ I EV + + EA FF A P L Sbjct: 407 PCPACGGTRYKREVLSVKVAGRNIAEVSALPVREALAFFQGLEKTLPPFQAQIARPILRE 466 Query: 807 -ARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHF 865 +L L+DVGL Y+ L ++A TLSGGEAQR++LA ++ TG LY+LDEP+ GLH Sbjct: 467 IVERLGFLVDVGLDYLTLDRAANTLSGGEAQRIRLATQVGSGLTG-VLYVLDEPSIGLHP 525 Query: 866 ADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVA 925 D Q+L+ L +LRD GNT++V+EH+ + ++ ADWIVD+GP G GGE++ GT E + Sbjct: 526 RDNQRLIRTLKRLRDLGNTLIVVEHDEETMRAADWIVDMGPGAGIHGGEVVAQGTLEDIL 585 Query: 926 ECEASHTARFLK 937 + S T +L+ Sbjct: 586 KSPQSLTGAYLR 597 >UniRef50_C7N595 Excinuclease ABC subunit A n=57 Tax=Bacteria RepID=C7N595_SLAHD Length = 960 Score = 1076 bits (2783), Expect = 0.0, Method: Compositional matrix adjust. Identities = 539/957 (56%), Positives = 690/957 (72%), Gaps = 22/957 (2%) Query: 2 DKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYA 61 + I +RGAR HNLKN+++ IPRDKL+V+TGLSGSGKSSLAFDT++AEGQRRYVESLS+YA Sbjct: 6 ENIVIRGAREHNLKNVDVDIPRDKLVVITGLSGSGKSSLAFDTIFAEGQRRYVESLSSYA 65 Query: 62 RQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCP 121 RQFL M+KPD+D I+GLSPA++I+QK+TS NPRSTVGT TEI+DYLRLL+AR+G P CP Sbjct: 66 RQFLGQMDKPDLDRIDGLSPAVAIDQKTTSRNPRSTVGTTTEIYDYLRLLYARIGIPHCP 125 Query: 122 DHDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARIDG 181 + + +T Q+ D VL EGKR+++LAP++ RKGEHTK E+L +G+ R RIDG Sbjct: 126 ECGREIRKRTTDQVADEVLELGEGKRVLILAPVVVGRKGEHTKVFEDLQKEGFSRVRIDG 185 Query: 182 EVCDLSDPP-KLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVADMDDP 240 EV L P KL+ + KHTI+VVVDR ++D R+AES ETA +L+ G VV +D+ Sbjct: 186 EVQRLDGTPIKLDKKFKHTIDVVVDRIVLKDSAIGRIAESIETATKLADGRVVVHVIDEE 245 Query: 241 ----------------KAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLG 284 A + +S ACP G+SM EL+PR FSFN P GACP C GLG Sbjct: 246 DAAADAQKSTPGFSTMSAADHFYSLALACPEHGHSMDELQPRDFSFNAPYGACPDCSGLG 305 Query: 285 VQQYFDPDRVIQNPELSLAGGAIRGWDRRNFYYFQMLKSLADHYKFDVEAPWGSLSANVH 344 ++ DP +I +P LSL+ GAI + N YY Q+L ++ H DV+ PW L Sbjct: 306 SREEVDPSLMIPDPSLSLSQGAIAPFVSGN-YYPQVLAAVCKHMGQDVDTPWEDLPKKTQ 364 Query: 345 KVVLYGSGKENIEFKYMNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNR 404 +L+G E + Y G + + G + + +RY++ +S A RE+ K+ + Sbjct: 365 NALLFGLKGEKVRVDYRTVDGRETYWFIDWTGAIDAVMQRYRDAQSDAQREKYGKYFATI 424 Query: 405 PCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIG 464 PCA+C G RL+ E V V + + +MS ++FFN + L+ + A IA I+KEI Sbjct: 425 PCATCGGKRLKPEILAVTVGGKSIDQVCEMSAVECLDFFNGIALSEREAVIATAIVKEIR 484 Query: 465 DRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDN 524 RL+FLV+VGL+YLTL R+ +LSGGEAQRIRLA+QIGAGL+GV+Y+LDEPSIGLHQRDN Sbjct: 485 ARLRFLVDVGLDYLTLERATASLSGGEAQRIRLATQIGAGLMGVLYILDEPSIGLHQRDN 544 Query: 525 ERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVP 584 ERL+ TL LRDLGNTVIVVEHDED IR+AD+VID+GPGAG GG +V+ G E + A Sbjct: 545 ERLIATLERLRDLGNTVIVVEHDEDTIRSADYVIDMGPGAGEKGGYLVSAGTPEEVAACE 604 Query: 585 ESLTGQYMSGKRKIEVPKKRVPANPEK-VLKLTGARGNNLKDVTLTLPVGLFTCITGVSG 643 +S+TG Y+ IEVPKKR NP++ +KL GA+ NNLK+VT+ + +G FT +TGVSG Sbjct: 605 KSITGAYLRRDSVIEVPKKR--RNPKRGSIKLAGAKENNLKNVTIDIEIGTFTVVTGVSG 662 Query: 644 SGKSTLINDTLFPIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPAT 703 SGKS+LI DTL P +LN A YR + G E DK+IDIDQSPIGRTPRSNPAT Sbjct: 663 SGKSSLITDTLAPALANRLNHAH-KRTGAYRKLSGYEELDKIIDIDQSPIGRTPRSNPAT 721 Query: 704 YTGVFTPVRELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPC 763 Y G++ +R LFA PE++ARGY PGRFSFNV GGRCEAC+GDG +K+EMHFLPD+YVPC Sbjct: 722 YIGLWDDIRALFASTPEAKARGYAPGRFSFNVSGGRCEACKGDGQLKIEMHFLPDVYVPC 781 Query: 764 DQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRL 823 + C GKRYNRETL++ Y+GK +++VLDMT++EA EFF +P L+RKLQTL DVGL YIRL Sbjct: 782 EVCGGKRYNRETLQVTYRGKNVYDVLDMTVDEALEFFKNIPGLSRKLQTLHDVGLGYIRL 841 Query: 824 GQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGN 883 GQ ATTLSGGEAQRVKLA EL +R +G+T+Y+LDEPTTGLH D++QLL+VL +L D GN Sbjct: 842 GQPATTLSGGEAQRVKLASELQRRQSGKTIYVLDEPTTGLHMEDVKQLLEVLQRLVDCGN 901 Query: 884 TIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLKPML 940 T++VIEHNLDVIK+AD ++DLGPEGG GG ++ GTPE VA E SHT RFL+ +L Sbjct: 902 TMLVIEHNLDVIKSADRVIDLGPEGGDRGGTVVAKGTPEKVANNENSHTGRFLRSVL 958 >UniRef50_D2RIL7 Excinuclease ABC, A subunit n=3 Tax=Bacteria RepID=D2RIL7_ACIFE Length = 939 Score = 1072 bits (2772), Expect = 0.0, Method: Compositional matrix adjust. Identities = 531/940 (56%), Positives = 681/940 (72%), Gaps = 6/940 (0%) Query: 2 DKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYA 61 D I ++GAR HNLKNI+L IPR+KL+V+TGLSGSGKSSLAFDT+YAEGQRRYVESLSAYA Sbjct: 4 DVIVIQGARQHNLKNISLNIPRNKLVVITGLSGSGKSSLAFDTIYAEGQRRYVESLSAYA 63 Query: 62 RQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCP 121 RQFL M+KPDVD+I GLSPAISI+QK+TS NPRSTVGT+TEI+DYLRLLFAR+G P CP Sbjct: 64 RQFLGQMDKPDVDYIGGLSPAISIDQKTTSRNPRSTVGTVTEIYDYLRLLFARIGIPHCP 123 Query: 122 DHDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARIDG 181 + Q+ Q+ D VL PEG + M+LAP+++ RKGEH LE + GY+R ++D Sbjct: 124 QCGKVIERQSPQQIADKVLELPEGTKFMILAPVVRGRKGEHKNILETVRRAGYVRVKVDD 183 Query: 182 EVCDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVADMDDPK 241 + L + +L+ +KKH+I VVVDR R L RL +S ETAL+L GT + ++ Sbjct: 184 HLYTLDEEIQLDKKKKHSISVVVDRLVARPGLGSRLTDSLETALKLGEGTVAIEEIG--- 240 Query: 242 AEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPELS 301 E ++S FAC CG S+ E+EPRLFSFN P GACP C GLG FDPD +I + Sbjct: 241 GETHVYSEKFACAECGISLPEIEPRLFSFNAPYGACPDCMGLGQHMEFDPDLIIPDKTRP 300 Query: 302 LAGGAIRGWDRR-NFYYFQMLKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKENIEFKY 360 GAI Y+ L ++ + ++ W L + +L G E F Y Sbjct: 301 FDQGAIAAVSSNVKSYFLCQLAAVLKSRGYSLQNCWKDLPRKFQQQLLEGIPDEIFTFSY 360 Query: 361 MNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGTRLRREARH 420 N G+ + PFEG++ ++RR KE S + R + F++ C++C G RLR E Sbjct: 361 QNLMGEINEHNTPFEGIIPVLKRRLKEAMSESQRLDYESFMTAIECSTCHGARLRPEVLG 420 Query: 421 VYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTL 480 + V+ + + M + + FFN L+L+ + A IA++ILKEI RL FL NVGL+YLTL Sbjct: 421 ITVDGKNIQQVCRMPVRECLAFFNGLQLSDRDAFIAKQILKEIRARLSFLNNVGLDYLTL 480 Query: 481 SRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNT 540 R+A TLSGGEAQRIRLA+QIG+GLVGV+Y+LDEPSIGLHQRDN++LL TL +LRD+GNT Sbjct: 481 DRAAATLSGGEAQRIRLATQIGSGLVGVLYILDEPSIGLHQRDNDKLLETLKNLRDMGNT 540 Query: 541 VIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEV 600 +IVVEHDED +RAAD +IDIGPGAG +GG VVA+G + I VPES+TGQY+SG++KI V Sbjct: 541 LIVVEHDEDTMRAADQIIDIGPGAGENGGYVVAQGTADEISQVPESITGQYLSGRKKIPV 600 Query: 601 PKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQR 660 P++R N K L + GAR NNLKD+ +++P+G T +TGVSGSGKSTLIND L+ + Sbjct: 601 PQERRKGNG-KQLTIKGARANNLKDIDVSIPLGTLTVVTGVSGSGKSTLINDILYKALAK 659 Query: 661 QLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPE 720 +L GA P + I G++H DKVI+IDQSPIGRTPRSNPATYTG F +R LF+ + Sbjct: 660 KLMGAR-ERPLAHDRINGIQHIDKVINIDQSPIGRTPRSNPATYTGTFDLIRTLFSTTND 718 Query: 721 SRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKY 780 ++ RGY PGRFSFNV+GGRCEAC GDG++K+EM+FLPD+YVPC+ CKG RYNR+TLE++Y Sbjct: 719 AKLRGYKPGRFSFNVKGGRCEACHGDGMLKIEMNFLPDVYVPCEVCKGTRYNRDTLEVRY 778 Query: 781 KGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKL 840 KGK I EVLDMT+ EA ++F + RKLQ L DVGL YIRLGQ+ATTLSGGEAQRVKL Sbjct: 779 KGKNIAEVLDMTVSEACQYFSNQQRILRKLQVLEDVGLGYIRLGQAATTLSGGEAQRVKL 838 Query: 841 ARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADW 900 A EL+K TG+TLYILDEPTTGLH AD+ +LL+VL +L D G+T+VVIEHNLDVIK+ADW Sbjct: 839 ATELAKVNTGRTLYILDEPTTGLHMADVHKLLEVLQRLVDAGSTVVVIEHNLDVIKSADW 898 Query: 901 IVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLKPML 940 ++DLGPEGG GG ++ +GTPE VA+ S+T +++K +L Sbjct: 899 LIDLGPEGGDRGGTVIATGTPEQVAQVPESYTGQYVKKVL 938 Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 42/118 (35%), Positives = 62/118 (52%), Gaps = 8/118 (6%) Query: 610 EKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAE 669 E V+ + GAR +NLK+++L +P ITG+SGSGKS+L DT++ QR+ + A Sbjct: 3 EDVIVIQGARQHNLKNISLNIPRNKLVVITGLSGSGKSSLAFDTIYAEGQRRYVESLSAY 62 Query: 670 PAPYR------DIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFA--GVP 719 + D+ + I IDQ R PRS T T ++ +R LFA G+P Sbjct: 63 ARQFLGQMDKPDVDYIGGLSPAISIDQKTTSRNPRSTVGTVTEIYDYLRLLFARIGIP 120 >UniRef50_Q46577 UvrABC system protein A n=5 Tax=Bacteria RepID=UVRA_DEIRA Length = 1016 Score = 1063 bits (2749), Expect = 0.0, Method: Compositional matrix adjust. Identities = 541/977 (55%), Positives = 693/977 (70%), Gaps = 45/977 (4%) Query: 2 DKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYA 61 DK+ VRGAR HNLK+I + +PRD+ +V+TG+SGSGKS+LAFDT+YAEGQRRYVESLSAYA Sbjct: 3 DKLIVRGAREHNLKDITVELPRDRFVVITGVSGSGKSTLAFDTIYAEGQRRYVESLSAYA 62 Query: 62 RQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCP 121 RQFL LMEKPDVD I GLSPAISI+QK+TSHNPRSTVGT+TEIHDYLRLL+ARVG P CP Sbjct: 63 RQFLGLMEKPDVDSITGLSPAISIDQKTTSHNPRSTVGTVTEIHDYLRLLYARVGTPYCP 122 Query: 122 DHDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARIDG 181 + Q+ S++ D +L+ KR +LLAP ++ RKGE+ K +L +GY R R+DG Sbjct: 123 ICGRKIEKQSPSEVTDRLLAGFPDKRAILLAPAVRGRKGEYKKLFADLRREGYARVRVDG 182 Query: 182 EVCDLSDPPKLELQK--KHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVADMD- 238 + +L + KL+L+K KH +++V+DR +R+ R+AES E + G V D Sbjct: 183 TLYELEEAEKLKLEKFEKHDVDIVIDRLTLRESDRSRIAESVELGIRRGEGLLRVLLPDA 242 Query: 239 --DPKAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQ 296 D A E L+S FACP G + ELEPR FSFN+P GAC C G+G +Q F P+R+I Sbjct: 243 GEDGGAHEELYSEKFACPEHGSVLEELEPRSFSFNSPYGACGDCAGIGAKQEFSPERII- 301 Query: 297 NPELSLAGGAIRGWDRRN----FYYFQMLKSLADHYKFDVEAPWGSLSANVHKVVLYGSG 352 + +LS+AGGAI W ++ YY+ LK+LA+H FD++ PW L A K VL+G G Sbjct: 302 DEKLSIAGGAIIPWTKKGADAGIYYWDKLKALAEHLDFDLKTPWKDLPAKAQKAVLHGPG 361 Query: 353 KENIEFKYMNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGT 412 E E Y +T FEGV+ N+ERRY +TES +RE L + + RPC +C GT Sbjct: 362 -EAFEVVYRRGGKETMRFMTEFEGVITNLERRYADTESEFMRERLEELMELRPCPTCGGT 420 Query: 413 RLRREARHVYVENTPLPAISDMSIGHAMEFFNNLK------------------------- 447 R + E V V + S MS+ A FF L+ Sbjct: 421 RYKPEILAVRVGGLNISQTSGMSVLDADAFFQQLQEGELDHAAIEPFLKRHTGGTAKAHG 480 Query: 448 -------LAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQ 500 L A +A IL+ I RLKFLV+VGL+YL+L R+A TLSGGEAQRIRLA+Q Sbjct: 481 PLHYEYDLGTFGAAVAAPILRAIRTRLKFLVDVGLDYLSLDRTANTLSGGEAQRIRLATQ 540 Query: 501 IGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDI 560 +G+GL GV+YVLDEPSIGLH +DN RL+GTL +LRDLGN+++VVEHDED + AD++ID+ Sbjct: 541 VGSGLTGVLYVLDEPSIGLHPKDNGRLIGTLKNLRDLGNSLLVVEHDEDTMLEADYLIDM 600 Query: 561 GPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEVPKKRVPANPEKVLKLTGARG 620 GPGAGVHGGEV+A G E + SLTG+Y+ G+ KIEVP +R P N K LK+ GAR Sbjct: 601 GPGAGVHGGEVIASGTPEQVKQDKNSLTGKYLRGEMKIEVPAERRPGNG-KFLKVFGARQ 659 Query: 621 NNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAEPAPYRDIQGLE 680 NNL+DV +++P+G T +TG SGSGKSTLI+D L R+LNGA P Y I+G+E Sbjct: 660 NNLQDVDVSIPLGTMTVVTGPSGSGKSTLIHDILHATLARELNGAKTT-PGLYDRIEGME 718 Query: 681 HFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESRARGYTPGRFSFNVRGGRC 740 DKVI+IDQSPIGRTPRSNPATYTGVFT +R+LF PE+R RGY GRFSFNV+GGRC Sbjct: 719 QLDKVIEIDQSPIGRTPRSNPATYTGVFTEIRDLFTRTPEARRRGYQAGRFSFNVKGGRC 778 Query: 741 EACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFF 800 E C+GDGV+K+EM+FLPDIYVPC+ C G RYNRETLE+KY KTI +VLD+T+E+A EFF Sbjct: 779 EHCKGDGVMKIEMNFLPDIYVPCEVCHGARYNRETLEVKYNHKTIADVLDLTVEDAHEFF 838 Query: 801 DAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPT 860 +A+P + RK+Q L+DVGL Y+++GQ +TTLSGGEAQR+KLA ELSKR TG+T+YILDEPT Sbjct: 839 EAIPTIERKMQLLLDVGLGYMKIGQPSTTLSGGEAQRIKLATELSKRATGRTIYILDEPT 898 Query: 861 TGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGT 920 TGLHF D+++L+DVL +L + GNT+V+IEHNLDV+K+AD+++DLGPEGG GG ++ GT Sbjct: 899 TGLHFEDVRKLMDVLQRLAEGGNTLVIIEHNLDVMKSADYLIDLGPEGGVRGGTVVAVGT 958 Query: 921 PETVAECEASHTARFLK 937 PE VA S+T +L+ Sbjct: 959 PEEVAAHPTSYTGEYLR 975 >UniRef50_P63381 UvrABC system protein A n=53 Tax=Bacteria RepID=UVRA_MYCBO Length = 972 Score = 1055 bits (2729), Expect = 0.0, Method: Compositional matrix adjust. Identities = 534/951 (56%), Positives = 690/951 (72%), Gaps = 20/951 (2%) Query: 2 DKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYA 61 D++ V+GAR HNL++++L +PRD LIV TGLSGSGKSSLAFDT++AEGQRRYVESLSAYA Sbjct: 3 DRLIVKGAREHNLRSVDLDLPRDALIVFTGLSGSGKSSLAFDTIFAEGQRRYVESLSAYA 62 Query: 62 RQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCP 121 RQFL M+KPDVD IEGLSPA+SI+QKST+ NPRSTVGTITE++DYLRLL+AR G P CP Sbjct: 63 RQFLGQMDKPDVDFIEGLSPAVSIDQKSTNRNPRSTVGTITEVYDYLRLLYARAGTPHCP 122 Query: 122 DHDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARIDG 181 +A QT Q+VD VL+ PEG R ++LAP+++ RKGE + L +QGY R R+DG Sbjct: 123 TCGERVARQTPQQIVDQVLAMPEGTRFLVLAPVVRTRKGEFADLFDKLNAQGYSRVRVDG 182 Query: 182 EVCDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVADMDD-- 239 V L+DPPKL+ Q+KH IEVVVDR V+ +RL +S ETAL L+ G V+ +D Sbjct: 183 VVHPLTDPPKLKKQEKHDIEVVVDRLTVKAAAKRRLTDSVETALNLADGIVVLEFVDHEL 242 Query: 240 --PKAEELLFSANFACPICGYSMR--ELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVI 295 P E+ FS ACP G+++ +LEPR FSFN+P GACP C GLG+++ DP+ V+ Sbjct: 243 GAPHREQR-FSEKLACP-NGHALAVDDLEPRSFSFNSPYGACPECSGLGIRKEVDPELVV 300 Query: 296 QNPELSLAGGAIRGWDRRNF--YYFQMLKSLADHYKFDVEAPWGSLSANVHKVVLYGSGK 353 +P+ +LA GA+ W + Y+ +M+ L + FDV+ PW L A K +L G+ Sbjct: 301 PDPDRTLAQGAVAPWSNGHTAEYFTRMMAGLGEALGFDVDTPWRKLPAKARKAILEGA-D 359 Query: 354 ENIEFKYMNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGTR 413 E + +Y N G T FEGVL ++R+ +TES ++E F+ + PC C GTR Sbjct: 360 EQVHVRYRNRYGRTRSYYADFEGVLAFLQRKMSQTESEQMKERYEGFMRDVPCPVCAGTR 419 Query: 414 LRREARHVYVEN--------TPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGD 465 L+ E V + + + ++SI +F N L L + IA ++LKEI Sbjct: 420 LKPEILAVTLAGESKGEHGAKSIAEVCELSIADCADFLNALTLGPREQAIAGQVLKEIRS 479 Query: 466 RLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNE 525 RL FL++VGL YL+LSR+A TLSGGEAQRIRLA+QIG+GLVGV+YVLDEPSIGLHQRDN Sbjct: 480 RLGFLLDVGLEYLSLSRAAATLSGGEAQRIRLATQIGSGLVGVLYVLDEPSIGLHQRDNR 539 Query: 526 RLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPE 585 RL+ TL LRDLGNT+IVVEHDED I AD ++DIGPGAG HGG +V GP + ++ + Sbjct: 540 RLIETLTRLRDLGNTLIVVEHDEDTIEHADWIVDIGPGAGEHGGRIVHSGPYDELLRNKD 599 Query: 586 SLTGQYMSGKRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSG 645 S+TG Y+SG+ IE+P R +P + L + GAR +NL+ + ++ P+G+ T +TGVSGSG Sbjct: 600 SITGAYLSGRESIEIPAIRRSVDPRRQLTVVGAREHNLRGIDVSFPLGVLTSVTGVSGSG 659 Query: 646 KSTLINDTLFPIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYT 705 KSTL+ND L + +LNGA P + + GL++ DK++ +DQSPIGRTPRSNPATYT Sbjct: 660 KSTLVNDILAAVLANRLNGARQV-PGRHTRVTGLDYLDKLVRVDQSPIGRTPRSNPATYT 718 Query: 706 GVFTPVRELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQ 765 GVF +R LFA E++ RGY PGRFSFNV+GGRCEAC GDG IK+EM+FLPD+YVPC+ Sbjct: 719 GVFDKIRTLFAATTEAKVRGYQPGRFSFNVKGGRCEACTGDGTIKIEMNFLPDVYVPCEV 778 Query: 766 CKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQ 825 C+G RYNRETLE+ YKGKT+ EVLDM+IEEA EFF+ + + R L+TL+DVGL Y+RLGQ Sbjct: 779 CQGARYNRETLEVHYKGKTVSEVLDMSIEEAAEFFEPIAGVHRYLRTLVDVGLGYVRLGQ 838 Query: 826 SATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTI 885 A TLSGGEAQRVKLA EL KR TG+T+YILDEPTTGLHF DI++LL+V++ L D+GNT+ Sbjct: 839 PAPTLSGGEAQRVKLASELQKRSTGRTVYILDEPTTGLHFDDIRKLLNVINGLVDKGNTV 898 Query: 886 VVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFL 936 +VIEHNLDVIKT+DWI+DLGPEGG+GGG ++ GTPE VA AS+T +FL Sbjct: 899 IVIEHNLDVIKTSDWIIDLGPEGGAGGGTVVAQGTPEDVAAVPASYTGKFL 949 Score = 131 bits (329), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 82/190 (43%), Positives = 114/190 (60%), Gaps = 15/190 (7%) Query: 405 PCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIG 464 PC C+G R RE V+ + + + DMSI A EFF +AG + Sbjct: 775 PCEVCQGARYNRETLEVHYKGKTVSEVLDMSIEEAAEFFE--PIAG------------VH 820 Query: 465 DRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVG-VMYVLDEPSIGLHQRD 523 L+ LV+VGL Y+ L + A TLSGGEAQR++LAS++ G +Y+LDEP+ GLH D Sbjct: 821 RYLRTLVDVGLGYVRLGQPAPTLSGGEAQRVKLASELQKRSTGRTVYILDEPTTGLHFDD 880 Query: 524 NERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAV 583 +LL + L D GNTVIV+EH+ D I+ +D +ID+GP G GG VVA+G E + AV Sbjct: 881 IRKLLNVINGLVDKGNTVIVIEHNLDVIKTSDWIIDLGPEGGAGGGTVVAQGTPEDVAAV 940 Query: 584 PESLTGQYMS 593 P S TG++++ Sbjct: 941 PASYTGKFLA 950 >UniRef50_A2C5J2 Excinuclease ABC, A subunit, ATP/GTP-binding site motif A (P-loop):ABC transporter n=8 Tax=cellular organisms RepID=A2C5J2_PROM1 Length = 980 Score = 1054 bits (2725), Expect = 0.0, Method: Compositional matrix adjust. Identities = 525/957 (54%), Positives = 691/957 (72%), Gaps = 21/957 (2%) Query: 2 DKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYA 61 D I +RGAR HNLKN++L IPR++L+V TG+SGSGKSSLAFDT++AEGQRRYVESLSAYA Sbjct: 21 DLITIRGARQHNLKNVDLSIPRNQLVVFTGVSGSGKSSLAFDTIFAEGQRRYVESLSAYA 80 Query: 62 RQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCP 121 RQFL ++KPDVD IEGLSPAISI+QKSTSHNPRSTVGT+TEI DY RLLF R GEP CP Sbjct: 81 RQFLGQVDKPDVDSIEGLSPAISIDQKSTSHNPRSTVGTVTEIQDYFRLLFGRAGEPHCP 140 Query: 122 DHDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARIDG 181 + P+ Q++ +MVD + + PEG R LLAP+++ +KG H+K L LA++G++R RI+ Sbjct: 141 ECSRPIKPQSIDEMVDQIKTLPEGSRYQLLAPVVRGKKGTHSKLLSGLAAEGFVRVRINK 200 Query: 182 EVCDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVV-----AD 236 EV +L+D +L+ + H+IEVVVDR R+ + +RL +S T L+ G A+V + Sbjct: 201 EVRELADNIELDKNQVHSIEVVVDRLIAREGIEERLTDSLSTTLKRGDGLAIVEVVPKKN 260 Query: 237 MDDPKA--EELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRV 294 + PK +E LFS NFACP+ G + EL PRLFSFN+P GACP C GLG + F +RV Sbjct: 261 EELPKGIEKERLFSENFACPVHGAVIEELSPRLFSFNSPYGACPDCHGLGHLKKFTCERV 320 Query: 295 IQNPELSLAGGAIRGWDRRNFYYFQMLKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKE 354 + +P L + D+ N YYF +L S+ + + F+++ PW L ++L GS KE Sbjct: 321 VPDPSLPVYAAVAPWSDKDNSYYFSLLFSVGEAFGFEIKTPWKDLKEEQKNILLNGS-KE 379 Query: 355 NIEFKYMNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGTRL 414 I K + S + PFEG+L +ER+ ++ AVR++L K++ PCASC G RL Sbjct: 380 PILIKVDSRYKQDSGFKRPFEGILPILERQLQDANGEAVRQKLEKYLELVPCASCHGKRL 439 Query: 415 RREARHVYVENTPLPAISDMSIGHAMEFF---------NNLK--LAGQRAKIAEKILKEI 463 R EA V + + ++ S+ +E NN K L+ ++ KI E +LKEI Sbjct: 440 RPEALAVKLGPFAITDLTSSSVSTTLENVEELMGIETTNNSKQLLSNKQKKIGELVLKEI 499 Query: 464 GDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRD 523 RL+FL++VGL+YLTL R A TLSGGEAQRIRLA+QIGAGL GV+YVLDEPSIGLHQRD Sbjct: 500 RLRLQFLLDVGLDYLTLDRPAMTLSGGEAQRIRLATQIGAGLTGVLYVLDEPSIGLHQRD 559 Query: 524 NERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAV 583 N+RLL TL LRDLGNT++VVEHDED IR+ADH++DIGPGAGVHGGE++A+G L+ ++ Sbjct: 560 NDRLLSTLKKLRDLGNTLVVVEHDEDTIRSADHLVDIGPGAGVHGGEIIAQGSLDNLLTA 619 Query: 584 PESLTGQYMSGKRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSG 643 +SLTG Y+SG+ I P R + K L+L NNLK+V++ P+G +TGVSG Sbjct: 620 KKSLTGAYLSGRSSIPTPTSRRDSVQRK-LRLIDCNKNNLKNVSVDFPLGRLVAVTGVSG 678 Query: 644 SGKSTLINDTLFPIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPAT 703 SGKSTLIN+ L P L G + P ++++G++ DKVI IDQSPIGRTPRSN AT Sbjct: 679 SGKSTLINELLHPALNHSL-GLKVPFPKGLKELKGIKSIDKVIVIDQSPIGRTPRSNTAT 737 Query: 704 YTGVFTPVRELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPC 763 YTG F P+R+LFA E++ARGY G+FSFNV+GGRCEAC+G GV +EM+FLPD+YV C Sbjct: 738 YTGAFDPIRQLFATSVEAKARGYQAGQFSFNVKGGRCEACRGQGVNVIEMNFLPDVYVQC 797 Query: 764 DQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRL 823 D CKG R+NRETL++KYK +I +VL+MT+E+A + F A+P A +L+TL+DVGL YI+L Sbjct: 798 DVCKGARFNRETLQVKYKNYSISDVLEMTVEQAVDVFSAIPQAADRLRTLLDVGLGYIKL 857 Query: 824 GQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGN 883 GQ A TLSGGEAQRVKLA ELS+R TG+TLY++DEPTTGL F D+ +L+DV+ +L D+GN Sbjct: 858 GQPAPTLSGGEAQRVKLATELSRRATGKTLYLIDEPTTGLSFYDVHKLMDVIQRLVDKGN 917 Query: 884 TIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLKPML 940 +I+VIEHNLDVI+ +DW++D+GPEGG+ GGEI+ GTPE VA + SHT +LK +L Sbjct: 918 SIIVIEHNLDVIRCSDWVIDMGPEGGNRGGEIIAMGTPEEVATNKNSHTGGYLKKVL 974 Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 43/121 (35%), Positives = 60/121 (49%), Gaps = 8/121 (6%) Query: 607 ANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGAT 666 ++ E ++ + GAR +NLK+V L++P TGVSGSGKS+L DT+F QR+ + Sbjct: 17 SSTEDLITIRGARQHNLKNVDLSIPRNQLVVFTGVSGSGKSSLAFDTIFAEGQRRYVESL 76 Query: 667 IAEPAPYR------DIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELF--AGV 718 A + D+ +E I IDQ PRS T T + R LF AG Sbjct: 77 SAYARQFLGQVDKPDVDSIEGLSPAISIDQKSTSHNPRSTVGTVTEIQDYFRLLFGRAGE 136 Query: 719 P 719 P Sbjct: 137 P 137 >UniRef50_P63385 UvrABC system protein A n=172 Tax=cellular organisms RepID=UVRA_STRR6 Length = 943 Score = 1053 bits (2724), Expect = 0.0, Method: Compositional matrix adjust. Identities = 541/943 (57%), Positives = 689/943 (73%), Gaps = 9/943 (0%) Query: 2 DKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYA 61 DKI + GAR HNLKNI++ IPRDKL+VVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYA Sbjct: 3 DKIVIHGARAHNLKNIDVEIPRDKLVVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYA 62 Query: 62 RQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCP 121 RQFL MEKPDVD I+GLSPAISI+QK+TS NPRSTVGT TEI+DYLRLL+ARVG P C Sbjct: 63 RQFLGNMEKPDVDAIDGLSPAISIDQKTTSKNPRSTVGTTTEINDYLRLLYARVGTPYCI 122 Query: 122 DHDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARIDG 181 + + A +V Q+VD VL PE +RL +LAP+I+++KG+H +E + GY+R R+DG Sbjct: 123 NGHGAINASSVEQIVDKVLELPERQRLQILAPVIRKKKGQHKSVIEKVQKDGYVRVRVDG 182 Query: 182 EVCDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVADMDDPK 241 EV D+++ P+L K+H I+VVVDR +++ + RL +S E AL ++ G ++ MDD Sbjct: 183 EVYDVTEVPELSKSKQHNIDVVVDRIVIKEGIRSRLFDSIEAALRIAEGYVIIDTMDD-- 240 Query: 242 AEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPELS 301 ELLFS ++ACP+CG+++ ELEPRLFSFN P G+C CDGLG++ D D V+ + + Sbjct: 241 -SELLFSEHYACPVCGFTVPELEPRLFSFNAPFGSCSECDGLGIKLEVDTDLVVPDASKT 299 Query: 302 LAGGAIRGWDR-RNFYYFQMLKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKENIEFKY 360 L GA+ W+ + YY ML+ + ++ P+ LS ++LYGS + F Y Sbjct: 300 LREGALAPWNPISSNYYPNMLEQAMKVFGVAMDKPFEDLSEEDKNLILYGSDGKEFHFHY 359 Query: 361 MNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGTRLRREARH 420 N+ G PFEGV++N++RRY ET S R ++ +++ C +C+G RL +A Sbjct: 360 ENEFGGVRDIDIPFEGVINNIKRRYHETNSDYTRTQMRLYMNELTCGTCQGYRLNDQALS 419 Query: 421 VYVENTPLP---AISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNVGLNY 477 V V P ISD+SI ++ + L L+ A IA ILKEI DRL FL NVGLNY Sbjct: 420 VRVGGQQGPHIGEISDLSIADHLDLVSQLTLSENEAIIARPILKEIKDRLTFLNNVGLNY 479 Query: 478 LTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDL 537 LTLSRSA TLSGGE+QRIRLA+QIG+ L GV+Y+LDEPSIGLHQRDN+RL+ +L +RDL Sbjct: 480 LTLSRSAGTLSGGESQRIRLATQIGSNLSGVLYILDEPSIGLHQRDNDRLIASLKKMRDL 539 Query: 538 GNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRK 597 GNT+IVVEHDED +R AD++ID+GPGAGV GGE+VA G + + +S+TGQY+SGKR Sbjct: 540 GNTLIVVEHDEDTMREADYLIDVGPGAGVFGGEIVAAGTPKQVARNSKSITGQYLSGKRV 599 Query: 598 IEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPI 657 I VP++R N + +++ GAR NNL++VT P+G F +TGVSGSGKSTLIN L Sbjct: 600 IPVPEERRVGNG-RFIEVIGARENNLQNVTARFPLGKFIAVTGVSGSGKSTLINSILKKA 658 Query: 658 AQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAG 717 ++LN + +P ++ I G+EH D++IDIDQSPIGRTPRSNPATYTGVF +R+LFA Sbjct: 659 IAQKLNRNS-DKPGKFKTITGIEHVDRLIDIDQSPIGRTPRSNPATYTGVFDDIRDLFAQ 717 Query: 718 VPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLE 777 E++ RGY GRFSFNV+GGRCEAC GDG+IK+EMHFLPD+YV C+ C G RYN ETLE Sbjct: 718 TNEAKIRGYKKGRFSFNVKGGRCEACSGDGIIKIEMHFLPDVYVACEVCHGTRYNSETLE 777 Query: 778 IKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQR 837 + YK K I +VLDMT+ +A EFF +P + RKLQT+ DVGL Y+ LGQ ATTLSGGEAQR Sbjct: 778 VHYKEKNISQVLDMTVNDAVEFFQHIPKIQRKLQTIKDVGLGYVTLGQPATTLSGGEAQR 837 Query: 838 VKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKT 897 +KLA EL KR TG++ YILDEPTTGLH DI +LL VL + D GNT++VIEHNLDVIKT Sbjct: 838 MKLASELHKRSTGKSFYILDEPTTGLHTEDIARLLKVLARFVDDGNTVLVIEHNLDVIKT 897 Query: 898 ADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLKPML 940 AD I+DLGPEGG GGG I+V+GTPE VA EAS+T +LK L Sbjct: 898 ADHIIDLGPEGGVGGGTIIVTGTPEEVAANEASYTGHYLKGKL 940 >UniRef50_A7NS89 Excinuclease ABC, A subunit n=3 Tax=Bacteria RepID=A7NS89_ROSCS Length = 1043 Score = 1047 bits (2707), Expect = 0.0, Method: Compositional matrix adjust. Identities = 547/1030 (53%), Positives = 699/1030 (67%), Gaps = 92/1030 (8%) Query: 2 DKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYA 61 D I ++GAR HNLK I+L IPRDKL+V+TG+SGSGKSSLAFDTLYAEGQRRYVESLSAYA Sbjct: 4 DAIVIKGAREHNLKGIDLEIPRDKLVVLTGVSGSGKSSLAFDTLYAEGQRRYVESLSAYA 63 Query: 62 RQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCP 121 RQFL MEKP VD IEGLSPAI+IEQKS S NPRSTVGT+TEI+DYLRLL+ARVG C Sbjct: 64 RQFLGQMEKPKVDAIEGLSPAIAIEQKSASKNPRSTVGTVTEIYDYLRLLYARVGTQHCH 123 Query: 122 DHDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARIDG 181 P+++Q+ QMV+ VL+ P G R M+LAP++ +RKGE+ ++G+ R R+DG Sbjct: 124 VCGRPVSSQSAEQMVNRVLTLPTGTRFMVLAPLVSQRKGEYKDVFAEARAEGFARVRVDG 183 Query: 182 EVCDLSDPPKLELQKKHTIEVVVDRF----------KVR-----------------DDLT 214 E+ DL+ KL + KHTIE+V+DR +VR D Sbjct: 184 EIFDLAGEIKLNKKVKHTIEIVIDRLAMPARDAARDQVRSSDAPIGRAQEGSQSEWDAFV 243 Query: 215 QRLAESFETALELSGGTAVVADMDDP-KAEELLFSANFACPICGYSMRELEPRLFSFNNP 273 RL +S E AL + G +++ + AEE L S C CG S EL P++FSFN+P Sbjct: 244 TRLTDSVEQALRVGEGQLIISIQNKTGAAEEWLMSEANTCTHCGISFPELSPQMFSFNSP 303 Query: 274 AGACPTCDGLGVQQYFDPDRVIQNPELSLAGGAIRGW----DRRNFYYFQMLKSLADHYK 329 GACP C GLGV+ DP ++ NP L+L GA+ W +R+ + ++ L ++A HY Sbjct: 304 QGACPECTGLGVRLEVDPLLLVPNPSLTLHEGAVTYWGELRKKRDSWGYRALLAIARHYG 363 Query: 330 FDVEAPWGSLSANVHKVVLYGSGKENIEFKYMNDRGDTSIR-RHPFEGVLHNMERRYKET 388 FD++ PW LS V++YGSGKE I F++ ++ GD+ +EG+ + RR+++T Sbjct: 364 FDLDTPWEQLSEQARHVIIYGSGKERIRFQWGDEGGDSRGEFTRTWEGLASEIRRRFQQT 423 Query: 389 ESSAVREELAKFISNRPCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLK- 447 S RE F+S +PC +C G RLR E+ V V + ++ M+I A+ + N L Sbjct: 424 GSDYTREYYQSFMSEQPCPACSGARLRPESLAVRVGGLSIRDVTRMTIAGALAWVNALSG 483 Query: 448 ----------LAGQ-----------------------RAKIAEKILKEIGDRLKFLVNVG 474 L GQ + I +LKEI +RL FL+NVG Sbjct: 484 ISGNIAHLADLEGQVMPGVVAGNGAAHHGAVTPLTDYQMAIVNDVLKEIRERLGFLLNVG 543 Query: 475 LNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHL 534 L+YLTL R A TLSGGEAQRIRLASQIG+GLVGV Y+LDEPSIGLHQRDN +LL TL+ L Sbjct: 544 LHYLTLERPAPTLSGGEAQRIRLASQIGSGLVGVTYILDEPSIGLHQRDNRKLLDTLLKL 603 Query: 535 RDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSG 594 RDLGNTV+VVEHD + ++AAD +ID GPGAGV GG+VVA GP + A PESLTG Y++G Sbjct: 604 RDLGNTVVVVEHDLETMQAADWIIDFGPGAGVKGGQVVAAGPPNVVAASPESLTGAYLAG 663 Query: 595 KRKIEVPKKRVPANPEKV------------------------LKLTGARGNNLKDVTLTL 630 + +I P++R A V L+L GA NNL+DVT+ Sbjct: 664 RLEIPTPQQRRTARVRPVANGLQDAPRRRRVDHQSDLAEGPWLELEGATMNNLRDVTVRF 723 Query: 631 PVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQ 690 P+G+F C+TGVSGSGKS+LI +TL+P +L+ A + +P P+R ++GLEH DKVIDIDQ Sbjct: 724 PLGVFMCVTGVSGSGKSSLITETLYPALANRLHRAQL-KPGPFRALRGLEHLDKVIDIDQ 782 Query: 691 SPIGRTPRSNPATYTGVFTPVRELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIK 750 PIGRTPRSNPATY +F +RELFA E++ RGY GRFSFN++GGRCEAC+G+G + Sbjct: 783 QPIGRTPRSNPATYVKLFDLIRELFASTNEAKLRGYNAGRFSFNLKGGRCEACEGNGEKR 842 Query: 751 VEMHFLPDIYVPCDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKL 810 ++M FL D++V CD CKGKRYNRETL++KYKGK+I +VLDM ++ A EFFD VP + R L Sbjct: 843 IDMQFLADVWVRCDVCKGKRYNRETLQVKYKGKSIADVLDMDVQTALEFFDNVPRIKRML 902 Query: 811 QTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQ 870 QTL DVGL YI+LGQSATTLSGGEAQRVKLA+EL++ TG+T+YILDEPTTGLHFAD+Q+ Sbjct: 903 QTLHDVGLDYIKLGQSATTLSGGEAQRVKLAKELARVATGRTMYILDEPTTGLHFADVQR 962 Query: 871 LLDVLHKLRDQGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEAS 930 LL VLH+L D GNT++VIEHNLDVIKTADWI+D+GPEGG GGG ++ GTPE VA EAS Sbjct: 963 LLTVLHRLVDAGNTVLVIEHNLDVIKTADWIIDMGPEGGDGGGTVVAVGTPEEVAMIEAS 1022 Query: 931 HTARFLKPML 940 HT RFL+ +L Sbjct: 1023 HTGRFLREIL 1032 >UniRef50_O66911 UvrABC system protein A n=11 Tax=cellular organisms RepID=UVRA_AQUAE Length = 926 Score = 1038 bits (2685), Expect = 0.0, Method: Compositional matrix adjust. Identities = 531/944 (56%), Positives = 691/944 (73%), Gaps = 29/944 (3%) Query: 1 MDKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAY 60 MD+I +RGAR HNLKNI++ IP++KL+V+TG SGSGKSSLAFDTLYAEGQRRYVESLSAY Sbjct: 1 MDRIVIRGARQHNLKNIDVEIPKNKLVVITGPSGSGKSSLAFDTLYAEGQRRYVESLSAY 60 Query: 61 ARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRC 120 ARQFL +MEKP+VD IEGLSPAI+I+QK+TS NPRSTVGT+TEI+DYLR+L+A VG+P C Sbjct: 61 ARQFLGVMEKPEVDSIEGLSPAIAIDQKTTSKNPRSTVGTVTEIYDYLRVLWANVGKPHC 120 Query: 121 PDHDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARID 180 P L+ + +++D ++ + +GKR+M+L+PI++ +KGE + L + GY R ++D Sbjct: 121 PHCGNLLSGLSAHEILDRIVEKYKGKRVMILSPIVRGKKGEFRELLRQIEKWGYSRVKVD 180 Query: 181 GEVCDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVADMDDP 240 GE+ + + P LE KKHTIE+V+DR V ++ RL E E ALE S G + +++ Sbjct: 181 GELRRVIEVPPLEKNKKHTIELVIDRLTVSEEERARLLEDVEKALEFSSGLVKIEEVESG 240 Query: 241 KAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPEL 300 K E LFS CP G+S+ EL RLFSFN+P GACP+C GLGV+ DP V+ +PE Sbjct: 241 KEE--LFSEKLVCPEHGFSIPELSARLFSFNSPYGACPSCKGLGVKWEIDPA-VLIDPE- 296 Query: 301 SLAGGAIRGWDRRNFYYFQM-LKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKENIEFK 359 A A++ + F Y + + ++ +D PW L +V VLYGS N Sbjct: 297 KPAVKAVKIVESGYFNYLRFPIANVIRKLGYDPRTPWKKLPESVRATVLYGSESLN---- 352 Query: 360 YMNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGTRLRREAR 419 FEG++ ++ERR+ E ES +REE+ +I +PC C+G RLR+EA Sbjct: 353 --------------FEGIIPHLERRFLEEESERIREEIEDYIVEKPCPECKGARLRKEAL 398 Query: 420 HVYVENTPLPAISDMSIGHAMEFFNNL--KLAGQRAKIAEKILKEIGDRLKFLVNVGLNY 477 V ++ + + +M +G A EFF L KL G+ IA+++LKEI +RL FLVNVGL+Y Sbjct: 399 AVLIDGKSIWDVVNMPVGKAKEFFEELYEKLEGKEKIIADRLLKEIIERLGFLVNVGLDY 458 Query: 478 LTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDL 537 L+LSRSA TLSGGE QRIRLA+Q+G+ L GV+YVLDEPSIGLH RD +L+ TL LRDL Sbjct: 459 LSLSRSATTLSGGEMQRIRLATQLGSKLTGVLYVLDEPSIGLHPRDTSKLINTLKGLRDL 518 Query: 538 GNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRK 597 GNTV+VVEHD + I +ADHVI++GPGAG HGG +VA+G +E I + P SLTG Y+SG+++ Sbjct: 519 GNTVVVVEHDPETIESADHVIELGPGAGKHGGYLVAQGTVEEIKSHPSSLTGAYLSGRKE 578 Query: 598 IEVPK-KRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFP 656 I VPK +R P+ K +++ A+ +NLK++ + +P+GLF CITGVSGSGKSTLI D L+ Sbjct: 579 IPVPKERRKPSG--KFIRIVRAKEHNLKNINVDIPLGLFVCITGVSGSGKSTLIYDILYK 636 Query: 657 IAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFA 716 A+ G T + I+GLE+ DKVI+IDQSPIGRTPRSNPATYT VF +R LFA Sbjct: 637 YAKNYFYG-THEQVGEVEKIEGLENIDKVINIDQSPIGRTPRSNPATYTKVFDLIRNLFA 695 Query: 717 GVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETL 776 PE++ARGY PGRFSFNV+GGRCEACQG+GVIKVEMHFLP +YV C+ CKGKRYNRETL Sbjct: 696 QTPEAKARGYKPGRFSFNVKGGRCEACQGEGVIKVEMHFLPPVYVTCEVCKGKRYNRETL 755 Query: 777 EIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQ 836 EI YKGK I +VL+MT++EA +FF+ PA+ RKLQ L DVGL YI+LGQ A TLSGGEAQ Sbjct: 756 EITYKGKNIADVLEMTVDEAYDFFENHPAIRRKLQILKDVGLGYIKLGQPAPTLSGGEAQ 815 Query: 837 RVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIK 896 R+KLARELSK+ TG+TLY+LDEPTTGLH D+++L+DVL +L D+GNT+VVIEHNLDVIK Sbjct: 816 RIKLARELSKKETGRTLYLLDEPTTGLHMDDVKKLIDVLQRLVDKGNTVVVIEHNLDVIK 875 Query: 897 TADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLKPML 940 ADWI+DLGPEGG GG+++ GTPE VA+ S+T ++L+ L Sbjct: 876 CADWIIDLGPEGGERGGQVVAVGTPEEVAQNPNSYTGKYLRKYL 919 Score = 136 bits (343), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 77/198 (38%), Positives = 110/198 (55%), Gaps = 15/198 (7%) Query: 406 CASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGD 465 C C+G R RE + + + + +M++ A +FF N I Sbjct: 742 CEVCKGKRYNRETLEITYKGKNIADVLEMTVDEAYDFFENHP--------------AIRR 787 Query: 466 RLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVG-VMYVLDEPSIGLHQRDN 524 +L+ L +VGL Y+ L + A TLSGGEAQRI+LA ++ G +Y+LDEP+ GLH D Sbjct: 788 KLQILKDVGLGYIKLGQPAPTLSGGEAQRIKLARELSKKETGRTLYLLDEPTTGLHMDDV 847 Query: 525 ERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVP 584 ++L+ L L D GNTV+V+EH+ D I+ AD +ID+GP G GG+VVA G E + P Sbjct: 848 KKLIDVLQRLVDKGNTVVVIEHNLDVIKCADWIIDLGPEGGERGGQVVAVGTPEEVAQNP 907 Query: 585 ESLTGQYMSGKRKIEVPK 602 S TG+Y+ K E K Sbjct: 908 NSYTGKYLRKYLKKETLK 925 >UniRef50_D0MK77 Excinuclease ABC, A subunit n=2 Tax=Bacteroidetes RepID=D0MK77_RHOM4 Length = 981 Score = 998 bits (2579), Expect = 0.0, Method: Compositional matrix adjust. Identities = 507/941 (53%), Positives = 667/941 (70%), Gaps = 10/941 (1%) Query: 2 DKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYA 61 D I +RGAR HNLKNI+L IPR++L+V+TGLSGSGKSSLAFDT+YAEGQRRY+ESLSAYA Sbjct: 3 DCIVIRGAREHNLKNIDLDIPRERLVVITGLSGSGKSSLAFDTIYAEGQRRYLESLSAYA 62 Query: 62 RQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCP 121 RQFL ++E+PDVD I+GLSP I+IEQK+ S NPRSTVGT+TE++D+LRLL+ARV Sbjct: 63 RQFLGMLERPDVDFIDGLSPVIAIEQKTVSQNPRSTVGTVTEVYDFLRLLYARVATAYSH 122 Query: 122 DHDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARIDG 181 P+ QT ++++++LS PEG RL++LAP+++ RKG + + E +A QG+ R R+DG Sbjct: 123 ISGKPMRRQTDDEIINHILSFPEGTRLLILAPVVRGRKGHYRELFEQIARQGFERVRVDG 182 Query: 182 EVCDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVADMD-DP 240 E+ +++ KL+ K H IEVVVDR VR D+ R+ +S + AL + GG + ++ D Sbjct: 183 ELREITPGMKLDRYKTHDIEVVVDRIVVRPDIRPRVHDSVQIALGMGGGVLIAHVLNPDG 242 Query: 241 KAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPEL 300 + +FS + CP G S + P FSFN+P GACP C+GLG + DPD VI +P Sbjct: 243 MGTDHVFSRHLYCPEDGVSYDDPSPNTFSFNSPYGACPACNGLGTRLEIDPDLVIPDPSK 302 Query: 301 SLAGGAIRGWDR-RNFYYFQMLKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKENIEFK 359 S+ G + R R+ + F L+++A Y FD + P G+L+ +V+L G+G E + Sbjct: 303 SINEGGLAPLGRPRDVWIFSQLRAVAAAYGFDFDTPLGALTEEQRRVLLEGAGDREFEIE 362 Query: 360 Y-MNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGTRLRREA 418 Y DR T RH F G+ + + S + R F+ C +C G RL+ E+ Sbjct: 363 YRFKDR--TLRYRHRFGGIYEYLHHLREHAGSVSQRRWAESFMREMTCQACGGARLKPES 420 Query: 419 RHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNVGLNYL 478 + + ++ M + F + L+ GQ+A IA ILKEI +RL FL+ VG+ YL Sbjct: 421 LAFRIGGKNIAELAHMDLVSLRRFLSELQFEGQKALIARPILKEILERLGFLIEVGVGYL 480 Query: 479 TLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLG 538 TL R A TLSGGE+QRIRLA+Q+G+ L GV+YVLDEPSIGLH RD+ RL+ L LRDLG Sbjct: 481 TLDRPARTLSGGESQRIRLAAQLGSQLTGVLYVLDEPSIGLHPRDHHRLIDALKLLRDLG 540 Query: 539 NTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPE--SLTGQYMSGKR 596 N+++VVEHD + I AAD+VID+GPGAG HGG VVA GP + + SLT Y+ G R Sbjct: 541 NSILVVEHDREMIEAADYVIDLGPGAGEHGGHVVAAGPPDRLEVRDGHVSLTAAYLKGAR 600 Query: 597 KIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFP 656 I VP++R N + L L GARG+NLK L LP+G F C+TGVSGSGKS+LIN TL+P Sbjct: 601 YIPVPRERRTGNGHR-LVLYGARGHNLKGDPLVLPLGTFICVTGVSGSGKSSLINQTLYP 659 Query: 657 IAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFA 716 I R + A + P PY I+GLEH DKVIDIDQ PIGRTPRSNPATYTG+F+ +R+LFA Sbjct: 660 ILARHFHNARLV-PLPYERIEGLEHLDKVIDIDQKPIGRTPRSNPATYTGLFSHIRDLFA 718 Query: 717 GVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETL 776 +PE++ RGY PGRFSFNV+GGRCE C+G GV+K+EM+FLPD++V C+ C+G+RYN ETL Sbjct: 719 RLPEAQLRGYKPGRFSFNVKGGRCETCKGAGVVKLEMNFLPDVHVTCETCRGRRYNAETL 778 Query: 777 EIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQ 836 E++Y+GK+I +VL+MT++EA FF+ +P +ARKL+TL VGL YIRLGQ ATTLSGGEAQ Sbjct: 779 EVRYRGKSIADVLEMTVDEALAFFENMPRIARKLRTLQAVGLGYIRLGQPATTLSGGEAQ 838 Query: 837 RVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIK 896 R+KLARELS+ GTG TLYILDEPTTGLHF DI+ LL VL L +GNT++VIEHNLDVIK Sbjct: 839 RIKLARELSRPGTGNTLYILDEPTTGLHFEDIRHLLAVLRALVRKGNTVLVIEHNLDVIK 898 Query: 897 TADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLK 937 AD +++LGPEGG GG IL +GTPE +A + +HT RFL+ Sbjct: 899 VADHVIELGPEGGDAGGHILFAGTPEELA-AQDTHTGRFLR 938 >UniRef50_D2QY36 Excinuclease ABC, A subunit n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2QY36_9PLAN Length = 2373 Score = 994 bits (2570), Expect = 0.0, Method: Compositional matrix adjust. Identities = 514/1000 (51%), Positives = 688/1000 (68%), Gaps = 66/1000 (6%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 63 I ++GAR HNL++++LV+PR++LI +TG+SGSGKSSLAFDTL+AEGQRRYVESLS+YARQ Sbjct: 6 IVIQGAREHNLRDVSLVLPRNQLICLTGVSGSGKSSLAFDTLFAEGQRRYVESLSSYARQ 65 Query: 64 FLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCPDH 123 FL M KPDVD I GLSP+ISI QKST +NPRSTVGTITEIHDYLR+L+AR+G+ CP Sbjct: 66 FLGQMPKPDVDFIGGLSPSISISQKSTGNNPRSTVGTITEIHDYLRVLYARIGQGFCPKC 125 Query: 124 DVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARIDGEV 183 + AQ+ Q++++++S G +L +LAP+I+++KGE+ E+L QG++RAR+DG V Sbjct: 126 GRAITAQSREQIIESIISLESGTKLQILAPLIRQQKGEYRDLFEDLLKQGFVRARVDGNV 185 Query: 184 CDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVADMDD---- 239 LSD L+ Q +H IEVV+DR +R D+ RLAE+ E AL++ G +VA +D Sbjct: 186 VQLSDKLSLDRQMRHDIEVVIDRLVMRSDIRPRLAEAVELALKMGQGNLIVAIENDSAVK 245 Query: 240 PKAE---------------------------------------ELLFSANFACPICGYSM 260 P AE +LL+S+++AC C S Sbjct: 246 PSAEFTEALRTAQSQETDSDSEESEEAETKTTKKRRGGSARPGDLLYSSSYACTPCKLSF 305 Query: 261 RELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPELSLAGGAIR---GWDRRNFYY 317 P+LFSFN+P G CP CDGLGV FDP ++ +P L+ GAI W + Sbjct: 306 EPPSPQLFSFNSPQGMCPQCDGLGVMYSFDPVLLVPSPNLNFKEGAIEPVGSWHDLGRWR 365 Query: 318 FQMLKSLADHYKFD--------VEAPWGSLSANVHKVVLYGSGKENIEFKYMNDRGDTSI 369 + + +AD + +E PW SL+A++ K+ L+G+G E+I + + + + + Sbjct: 366 RHIFQGVADTVERKRELDAGTMLETPWKSLAADLKKLWLWGTGDEHITYTWRGGK-EPMM 424 Query: 370 RRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGTRLRREARHVYVENTP-- 427 FEGV+ + +Y+ ++S + + L +++S C +C+G RL +ARHV + +T Sbjct: 425 YGGKFEGVIPELTAKYRGSKSKSQIKGLERYMSMVSCPACKGERLIEQARHVRLTSTAPG 484 Query: 428 -------LPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTL 480 LP +S++++ A +FF +L L + IA ++LKEI RL FL++VGL+YL+L Sbjct: 485 YVGKQLTLPEVSNLAVSEASKFFASLALDQTQTTIAAEVLKEIRTRLGFLIDVGLDYLSL 544 Query: 481 SRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNT 540 R+A TLSGGE+QRIRLA QIG+GLVGV+Y+LDEPSIGLH RDN+RLL TL LRD+GNT Sbjct: 545 DRTAPTLSGGESQRIRLAGQIGSGLVGVLYILDEPSIGLHPRDNDRLLSTLHRLRDMGNT 604 Query: 541 VIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEV 600 VIVVEHDED +RAAD +ID GPG GV GGEVV GP ++ SLTGQY+SG+++IEV Sbjct: 605 VIVVEHDEDTMRAADTIIDFGPGPGVRGGEVVVHGPPSEVIKNKRSLTGQYLSGEKQIEV 664 Query: 601 PKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQR 660 P KR A EK L+L G NNLK+VT +P+G C+TGVSGSGKS+L+ D L R Sbjct: 665 PAKR-RAVGEKALRLVGCTHNNLKNVTAEIPLGGLICVTGVSGSGKSSLVTDILVEALHR 723 Query: 661 QLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPE 720 LN P + I+GLEH DK+I IDQ+PIGRTPRSNP TY +F +R+LF +PE Sbjct: 724 DLNFGE-GNPGAHEKIEGLEHLDKLISIDQTPIGRTPRSNPGTYIKLFDDIRDLFTQLPE 782 Query: 721 SRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKY 780 ++ RGY PGRFSFNV GGRCEAC+G+G K+EM FL D++V C C+GKR+NRETL++K+ Sbjct: 783 AKRRGYKPGRFSFNVEGGRCEACEGNGSNKLEMDFLADVWVTCPVCEGKRFNRETLQVKF 842 Query: 781 KGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKL 840 K K+I +VL+M +++A E F+ VP + KLQTL DVGL YI++GQ++ TLSGGEAQR+KL Sbjct: 843 KDKSIADVLEMDVQQALELFENVPHVRHKLQTLHDVGLDYIKIGQASPTLSGGEAQRIKL 902 Query: 841 ARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADW 900 AREL K+ TG+TLY+LDEPTTGLHFADI LL VLH D GNT++V+EHNLDVIKTADW Sbjct: 903 ARELVKKSTGKTLYLLDEPTTGLHFADIHLLLGVLHNFADAGNTVLVVEHNLDVIKTADW 962 Query: 901 IVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLKPML 940 I+D+GPEGG+ GGEIL GTPE +A+ SHT R L +L Sbjct: 963 IIDMGPEGGAAGGEILAVGTPEEIAKNTRSHTGRALAKIL 1002 Score = 870 bits (2247), Expect = 0.0, Method: Compositional matrix adjust. Identities = 448/964 (46%), Positives = 629/964 (65%), Gaps = 49/964 (5%) Query: 3 KIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYAR 62 +I VRGAR HNLK +++ + RDK+ V G SGSGKSSLA DT+YAEGQRRYVESLSAYAR Sbjct: 1035 QITVRGARQHNLKGVDVTVERDKMTVFCGPSGSGKSSLAMDTIYAEGQRRYVESLSAYAR 1094 Query: 63 QFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCPD 122 QF++ M+KP V+HI+GLSPAI+IEQK+ H PRSTVGT+TE++DY R+L AR+G+ CP Sbjct: 1095 QFVAQMQKPLVEHIDGLSPAIAIEQKNLGHTPRSTVGTVTEVYDYFRILMARLGQAYCPA 1154 Query: 123 HDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARIDGE 182 D+P+ QT Q+VD++L++ EG +L L+API + + E+L S GY R R+DG Sbjct: 1155 CDIPVGTQTADQVVDSILTELEGAKLYLMAPIEIDAGQTYASLFEHLRSIGYSRVRVDGV 1214 Query: 183 VCDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVADMD---- 238 L P ++ ++KHT+EVV+DR V RLA S E AL L G VA +D Sbjct: 1215 TSSLDAAPTIDRRRKHTVEVVIDRVNVNPAQRSRLAGSIENALALGKGVLHVAKVDESIP 1274 Query: 239 DPKAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNP 298 +P+ E ++ S + AC C S L P FSFN+ G C C+GLG Q + V+ +P Sbjct: 1275 EPRWEVMVHSQHMACRKCNRSFEPLSPHSFSFNSTLGWCKACEGLGTQVGANLAAVVSDP 1334 Query: 299 ELSLAGGAIRGWDRRNF-YYFQMLKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKENIE 357 + +L G I W ML +LA ++ P+ L +++L+G+G+ + Sbjct: 1335 KRTLREGVIDVWPSLQLPLSSAMLDALARSTGLPLDKPFDQLGHRFKRLLLHGTGE---Q 1391 Query: 358 FKYMNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGTRLRRE 417 + + +G IR F+GV +E K S ++R +L ++ C++C G+RLR + Sbjct: 1392 WHEVAAKGLPKIRFQ-FKGVYPALEEASK--LSPSLRVKLESLVAEVECSTCGGSRLRDD 1448 Query: 418 ARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNVGLNY 477 + + + + +G + + L + KIA ++ +EI R++FLV+VGL+Y Sbjct: 1449 SSAARFRSRTIDEYCRLPLGTLLSEIQHWNLTDRERKIAGELTREIVGRVQFLVDVGLDY 1508 Query: 478 LTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDL 537 L+LSR A TLS GEAQRIRLASQ+G+GL GV+YVLDEP+IGLH RDN +LLG L LRDL Sbjct: 1509 LSLSRGAATLSNGEAQRIRLASQLGSGLCGVLYVLDEPTIGLHPRDNRKLLGALHKLRDL 1568 Query: 538 GNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRK 597 GNT++VVEHD + I DH++D GP AG GG+VVA+ + S+TG Y+SGK+ Sbjct: 1569 GNTLLVVEHDREVIEHCDHIVDFGPRAGKLGGQVVADATPAMLGKSKTSVTGPYLSGKKS 1628 Query: 598 IEVP----------------KKRVPANPEK---------------------VLKLTGARG 620 I +P KK P+ +K ++++ GAR Sbjct: 1629 IAIPRTRRISPLVVEPSRTKKKPAPSPLDKYEDRLKLAREASATKLLEGRPLIEVIGARH 1688 Query: 621 NNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAEPAPYRDIQGLE 680 NNL++V++ +P+G + +TG SGSGKSTLI + L+ R+L+ A++ P + +++GLE Sbjct: 1689 NNLRNVSIQIPLGTLSVVTGPSGSGKSTLIEEVLYASIARKLHRASLT-PGAHDEVRGLE 1747 Query: 681 HFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESRARGYTPGRFSFNVRGGRC 740 H +KVI +DQ P+G +P SNPATYTG F +R+LFA +PE++ RGY+ RFSFNV GGRC Sbjct: 1748 HINKVIRVDQQPLGNSPSSNPATYTGAFELIRQLFAQLPEAKLRGYSARRFSFNVPGGRC 1807 Query: 741 EACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFF 800 EAC+G+G ++EMHFL D++V C+ C+GKRYN ETL + + G++I EVLDMT EA + F Sbjct: 1808 EACEGNGQRRIEMHFLADVWVECETCRGKRYNAETLAVTFHGQSISEVLDMTCSEALQLF 1867 Query: 801 DAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPT 860 +P + R L+TL DVGL Y+ LGQ+A TLSGGEAQRVKLA ELS+ TG+TLY+LDEPT Sbjct: 1868 ANIPKIRRILETLCDVGLDYLTLGQAAPTLSGGEAQRVKLAAELSRPDTGRTLYLLDEPT 1927 Query: 861 TGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGT 920 TGLHF D+ +LL+VL +L D GNT+V+IEHNLD+IK+ADW++D+GP+ G GG+++ GT Sbjct: 1928 TGLHFDDLARLLEVLQRLVDLGNTVVLIEHNLDIIKSADWLIDMGPDAGENGGQVVACGT 1987 Query: 921 PETV 924 PE + Sbjct: 1988 PEMI 1991 Score = 149 bits (375), Expect = 6e-34, Method: Compositional matrix adjust. Identities = 118/336 (35%), Positives = 171/336 (50%), Gaps = 40/336 (11%) Query: 406 CASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGD 465 C CEG R RE V ++ + + +M + A+E F N+ + Sbjct: 825 CPVCEGKRFNRETLQVKFKDKSIADVLEMDVQQALELFENVP--------------HVRH 870 Query: 466 RLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVG-VMYVLDEPSIGLHQRDN 524 +L+ L +VGL+Y+ + +++ TLSGGEAQRI+LA ++ G +Y+LDEP+ GLH D Sbjct: 871 KLQTLHDVGLDYIKIGQASPTLSGGEAQRIKLARELVKKSTGKTLYLLDEPTTGLHFADI 930 Query: 525 ERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVP 584 LLG L + D GNTV+VVEH+ D I+ AD +ID+GP G GGE++A G E I Sbjct: 931 HLLLGVLHNFADAGNTVLVVEHNLDVIKTADWIIDMGPEGGAAGGEILAVGTPEEIAKNT 990 Query: 585 ESLTGQYMSGKRKIEVPK------------------KRVPANPEKVLKLTGARGNNLKDV 626 S TG+ ++ K + P K A K + + GAR +NLK V Sbjct: 991 RSHTGRALA-KILSQTPASLMAAATAARAARNGKAAKNGSALLAKQITVRGARQHNLKGV 1049 Query: 627 TLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAEPAPY-RDIQG--LEHFD 683 +T+ T G SGSGKS+L DT++ QR+ + A + +Q +EH D Sbjct: 1050 DVTVERDKMTVFCGPSGSGKSSLAMDTIYAEGQRRYVESLSAYARQFVAQMQKPLVEHID 1109 Query: 684 KV---IDIDQSPIGRTPRSNPATYTGVFTPVRELFA 716 + I I+Q +G TPRS T T V+ R L A Sbjct: 1110 GLSPAIAIEQKNLGHTPRSTVGTVTEVYDYFRILMA 1145 Score = 132 bits (332), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 75/178 (42%), Positives = 107/178 (60%), Gaps = 15/178 (8%) Query: 406 CASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGD 465 C +C G R E V + + DM+ A++ F N+ +I Sbjct: 1830 CETCRGKRYNAETLAVTFHGQSISEVLDMTCSEALQLFANIP--------------KIRR 1875 Query: 466 RLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVG-VMYVLDEPSIGLHQRDN 524 L+ L +VGL+YLTL ++A TLSGGEAQR++LA+++ G +Y+LDEP+ GLH D Sbjct: 1876 ILETLCDVGLDYLTLGQAAPTLSGGEAQRVKLAAELSRPDTGRTLYLLDEPTTGLHFDDL 1935 Query: 525 ERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMA 582 RLL L L DLGNTV+++EH+ D I++AD +ID+GP AG +GG+VVA G E I+A Sbjct: 1936 ARLLEVLQRLVDLGNTVVLIEHNLDIIKSADWLIDMGPDAGENGGQVVACGTPEMIVA 1993 Score = 131 bits (329), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 83/232 (35%), Positives = 124/232 (53%), Gaps = 17/232 (7%) Query: 720 ESRARGYTPGRFSFN-VRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEI 778 E A+G RF F V EA + ++V++ L V C C G R ++ Sbjct: 1394 EVAAKGLPKIRFQFKGVYPALEEASKLSPSLRVKLESLV-AEVECSTCGGSRLRDDSSAA 1452 Query: 779 KYKGKTIHEV--------------LDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLG 824 +++ +TI E ++T E + + + ++Q L+DVGL Y+ L Sbjct: 1453 RFRSRTIDEYCRLPLGTLLSEIQHWNLTDRERKIAGELTREIVGRVQFLVDVGLDYLSLS 1512 Query: 825 QSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNT 884 + A TLS GEAQR++LA +L G LY+LDEPT GLH D ++LL LHKLRD GNT Sbjct: 1513 RGAATLSNGEAQRIRLASQLGS-GLCGVLYVLDEPTIGLHPRDNRKLLGALHKLRDLGNT 1571 Query: 885 IVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFL 936 ++V+EH+ +VI+ D IVD GP G GG+++ TP + + + S T +L Sbjct: 1572 LLVVEHDREVIEHCDHIVDFGPRAGKLGGQVVADATPAMLGKSKTSVTGPYL 1623 Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 44/126 (34%), Positives = 60/126 (47%), Gaps = 10/126 (7%) Query: 609 PEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQL------ 662 P + + GAR +NL+DV+L LP C+TGVSGSGKS+L DTLF QR+ Sbjct: 2 PPTDIVIQGAREHNLRDVSLVLPRNQLICLTGVSGSGKSSLAFDTLFAEGQRRYVESLSS 61 Query: 663 NGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESR 722 P D+ + I I Q G PRS T T + +R L+A + Sbjct: 62 YARQFLGQMPKPDVDFIGGLSPSISISQKSTGNNPRSTVGTITEIHDYLRVLYARI---- 117 Query: 723 ARGYTP 728 +G+ P Sbjct: 118 GQGFCP 123 >UniRef50_Q9WYV0 UvrABC system protein A n=8 Tax=Bacteria RepID=UVRA_THEMA Length = 916 Score = 985 bits (2546), Expect = 0.0, Method: Compositional matrix adjust. Identities = 509/945 (53%), Positives = 667/945 (70%), Gaps = 34/945 (3%) Query: 1 MDKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAY 60 M++I V+GAR HNLKNI + IP+++L+V+TG+SGSGKSSLA DT+YAEGQRRY+ESLS Y Sbjct: 1 MNEIVVKGARVHNLKNITVRIPKNRLVVITGVSGSGKSSLAMDTIYAEGQRRYLESLSTY 60 Query: 61 ARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRC 120 ARQFL ++KPDVD IEGLSPAI+I+QK+ SHNPRSTVGT+TEI+DYLR+L+AR+G+ C Sbjct: 61 ARQFLGNLKKPDVDEIEGLSPAIAIDQKTVSHNPRSTVGTVTEIYDYLRVLYARIGKAHC 120 Query: 121 PDHDVPLAAQTVSQMVDNVL-SQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARI 179 P+ PL +++ +++ ++ S EG R+ +LAP+ E+KG K +E S+G+ R I Sbjct: 121 PECGRPLEKKSIDEILQDLFNSFKEGSRIYILAPVATEKKGTFKKEIEEFISKGFARIEI 180 Query: 180 DGEVCDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVADMDD 239 DGE+ L + P+L+ K+HT+++VVDR + R+ +S E A+ G + ++D Sbjct: 181 DGEIYRLEEVPELDKNKRHTVKLVVDRLILETRNEHRILDSLELAMREGKGFVEIRNVD- 239 Query: 240 PKAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPE 299 E +FS N CP+CG E+ P+LFSFN+P GACP C GLG DP VI + Sbjct: 240 -TGESKIFSENLMCPVCGIGFPEITPKLFSFNSPYGACPNCHGLGFTFEVDPSLVIDEEK 298 Query: 300 LSLAGGAI-RGWDRRNFYYFQMLKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKENIEF 358 L G I WDRR + + + P+ L +V + +LYG Sbjct: 299 SVLEGAIIPYRWDRR---LSRWVAREIEKRGVSPHLPFKDLPEDVKEFILYG-------- 347 Query: 359 KYMNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAK-FISNRPCASCEGTRLRRE 417 +DR FEGV+ ++R ++ETES ++E L K FI R C+ C G RL RE Sbjct: 348 ---DDR---------FEGVVPKVQRWHRETESPEMKEWLEKNFIVQRTCSVCGGRRLNRE 395 Query: 418 ARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNVGLNY 477 A V + + +++SI +EF NL L + +I ++LKEI RL+FLV+VGL Y Sbjct: 396 ALSVKINGLNIHEFTELSISEELEFLKNLNLTEREREIVGELLKEIEKRLEFLVDVGLEY 455 Query: 478 LTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDL 537 LTLSRSA TLSGGE+QRIRLA+QIG+GL GV+YVLDEP+IGLH RD ERL+ TL LRDL Sbjct: 456 LTLSRSATTLSGGESQRIRLATQIGSGLTGVIYVLDEPTIGLHPRDTERLIKTLKKLRDL 515 Query: 538 GNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPES-LTGQYMSGKR 596 GNTVIVVEHDE+ IR ADH+IDIGPG G +GG VV +G ++ ++ P+S LTG+Y+SGKR Sbjct: 516 GNTVIVVEHDEEVIRNADHIIDIGPGGGTNGGRVVFQGTVDELLKNPDSSLTGEYLSGKR 575 Query: 597 KIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFP 656 KI V K R P LK+ G R NNLK++ + +P+G+F C+TGVSGSGKS+L+ +TL+P Sbjct: 576 KITVNKTR--RLPYASLKIKGVRHNNLKNIDVEIPLGVFVCVTGVSGSGKSSLVMETLYP 633 Query: 657 IAQRQLNGATIAEPA-PYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELF 715 L+ + PA + I+G E+ DK+I IDQSPIGRTPRSNPATYT VF +R LF Sbjct: 634 ALMNLLHKTKL--PAGEFDSIEGHENIDKMIAIDQSPIGRTPRSNPATYTKVFDEIRSLF 691 Query: 716 AGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRET 775 A P ++ARGY RFSFN++GGRCEACQG G +K+EM FLPD+YV CD CKGKRYNRET Sbjct: 692 AMTPAAKARGYNKSRFSFNLKGGRCEACQGQGYVKIEMLFLPDVYVECDVCKGKRYNRET 751 Query: 776 LEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEA 835 LEI YKGK I ++LDMT++EA EFF +P++ R LQ L DVGL Y++LGQ ATTLSGGEA Sbjct: 752 LEITYKGKNISDILDMTVDEALEFFKNIPSIKRTLQVLHDVGLGYVKLGQPATTLSGGEA 811 Query: 836 QRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVI 895 QR+KLA EL KR TG+TLYILDEPT GLHF D+++L++VLH+L D+GNT++VIEHNLDVI Sbjct: 812 QRIKLASELRKRDTGRTLYILDEPTVGLHFEDVRKLVEVLHRLVDRGNTVIVIEHNLDVI 871 Query: 896 KTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLKPML 940 K AD I+DLGPEGG GG I+ +GTPE +A+ S+T RFLK +L Sbjct: 872 KNADHIIDLGPEGGKEGGYIVATGTPEEIAKNPHSYTGRFLKNVL 916 >UniRef50_A6DP81 Excinuclease ABC, A subunit n=3 Tax=Bacteria RepID=A6DP81_9BACT Length = 939 Score = 969 bits (2505), Expect = 0.0, Method: Compositional matrix adjust. Identities = 505/944 (53%), Positives = 655/944 (69%), Gaps = 10/944 (1%) Query: 1 MDKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAY 60 M+ I ++GAR HNLKN+++ IPR+KL+VVTGLSGSGKSSLAFDTLYAEGQRRYVESLS+Y Sbjct: 1 MEDIFIKGARHHNLKNVDVRIPRNKLVVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSSY 60 Query: 61 ARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRC 120 ARQF+ MEKP+V+ I GLSPAI+IEQ+ +PRS V T TEI+DYLRL++A VG+ C Sbjct: 61 ARQFMDQMEKPEVEQITGLSPAIAIEQRGGVGSPRSIVATSTEIYDYLRLMYAHVGKRHC 120 Query: 121 PDHDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARID 180 P + +Q+ +V S PE K++++L+P+++ RKGEH + E G+ R R+D Sbjct: 121 PQCGERVQSQSAEAIVRKAQSFPEEKKMLILSPLVEGRKGEHKEVFEKAVRDGFARVRVD 180 Query: 181 GEVCDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVV-ADMDD 239 GE+C L D P L+ KH +++VVDR K + RL +S ETAL GG+ + + + Sbjct: 181 GEMCRLEDVPNLDKNFKHNVDLVVDRIKTGSK-SSRLTDSVETALTYGGGSIIFQVENEQ 239 Query: 240 PKAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVI---Q 296 + +E S + AC C S EL+ R FSFN+P GAC C GLG Q D D ++ + Sbjct: 240 GEWDEHKLSEHLACDACNISFSELQARDFSFNSPYGACGECHGLGSVQTLDIDMIVPDKR 299 Query: 297 NPELSLAGGAIRGWDRRNFYYFQMLKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKENI 356 P +G R FYY +L+S+ Y F++ + LS V+LYG+GK I Sbjct: 300 KPVKDAFPFWKKGPRRLVFYYKNLLESVGKAYDFELTTRFEDLSEKQRDVLLYGTGKA-I 358 Query: 357 EFKYMNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGTRLRR 416 Y N G PFEGV N+ RR ET S RE++ + R C SC G RL+ Sbjct: 359 RMVYKN-AGRWYDVNKPFEGVARNITRRMNETGSDRQREKILSLMVRRECGSCHGDRLKP 417 Query: 417 EARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNVGLN 476 E+ V V++ P+ MSI A EF NL IA ++ +EI RL FL VGLN Sbjct: 418 ESLAVTVKDMPINHFLRMSIADAAEFIQNLDFNETEKVIAGEVSREIDSRLGFLNAVGLN 477 Query: 477 YLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRD 536 YL L+R + +LSGGEAQRIRLA+Q+GAGLVGV+Y+LDEPSIGLHQRDN+RLL TL HLR Sbjct: 478 YLNLNRESSSLSGGEAQRIRLATQLGAGLVGVLYILDEPSIGLHQRDNDRLLATLEHLRG 537 Query: 537 LGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKR 596 LGNTV+VVEHD D I AD++ID+GP AG GGE+V GP + IM ++LTGQYMSGK+ Sbjct: 538 LGNTVVVVEHDTDTILRADYLIDMGPMAGRLGGEIVFAGPPKEIMKA-DTLTGQYMSGKK 596 Query: 597 KIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFP 656 +I +P KR N K +K+ A NNL+ V +++P+G F C+TGVSGSGKSTL+++ L Sbjct: 597 EIAIPAKREKGNG-KSIKIKAAAENNLQKVNVSVPLGKFVCVTGVSGSGKSTLVHEILKK 655 Query: 657 IAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFA 716 + L G P R ++GLE DK I I QSPIG+TPRSNPATYTG F +R L+A Sbjct: 656 SINKHL-GIGRERPGKVRSVEGLEEIDKQIVITQSPIGKTPRSNPATYTGAFDQIRTLYA 714 Query: 717 GVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETL 776 P+++AR Y PGRFSFNV+GGRCE C+GDG K+EM+FLPD++V C+ C+G+RYN ETL Sbjct: 715 STPDAKARAYKPGRFSFNVKGGRCEECKGDGYRKIEMNFLPDVFVECEVCRGRRYNTETL 774 Query: 777 EIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQ 836 + YKG++I +VL+MTI+EA EFFD VP L + L TL +VGL Y+ +GQ+ATTLSGGEAQ Sbjct: 775 SVLYKGRSIADVLEMTIDEAYEFFDKVPKLKKILGTLEEVGLGYLHMGQAATTLSGGEAQ 834 Query: 837 RVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIK 896 RVKLA EL + G T+YILDEPTTGLH ADI +LL VLH+LRD GN+++VIEHNLDVIK Sbjct: 835 RVKLASELCRIPRGHTMYILDEPTTGLHIADIDRLLQVLHRLRDAGNSLIVIEHNLDVIK 894 Query: 897 TADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLKPML 940 TADWI+D+GPEGG+GGG+++VSGTPE VA+C AS T ++LKP+L Sbjct: 895 TADWIIDMGPEGGAGGGQVMVSGTPEKVAKCAASFTGQYLKPIL 938 >UniRef50_P47660 UvrABC system protein A n=6 Tax=Bacteria RepID=UVRA_MYCGE Length = 952 Score = 953 bits (2463), Expect = 0.0, Method: Compositional matrix adjust. Identities = 474/947 (50%), Positives = 657/947 (69%), Gaps = 16/947 (1%) Query: 2 DKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYA 61 D I V+GAR +NLKNIN+ IP+++ +V+TGLSGSGKSSLAF+T+YAEG+RRY+ESLS+YA Sbjct: 9 DFIRVKGARENNLKNINIDIPKNQFVVITGLSGSGKSSLAFNTIYAEGRRRYLESLSSYA 68 Query: 62 RQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCP 121 RQFL +KPDVD IEGLSPAISI+QK+TSHNPRST+GT+TEI+DYLRLL+AR+G P CP Sbjct: 69 RQFLGNSDKPDVDLIEGLSPAISIDQKTTSHNPRSTMGTVTEIYDYLRLLWARIGTPYCP 128 Query: 122 DHDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARIDG 181 + + QT++Q+ + + P ++ LLAP +K ++G T G++R +DG Sbjct: 129 NGHGSIQTQTINQIANQIFDLPNKSKVQLLAPTVKNQRGIFTNEFIKYKQLGFLRVLVDG 188 Query: 182 EVCDLSDPPKLELQKKHTIEVVVDRFKVRDD--LTQRLAESFETALELSGGTAVVADMDD 239 ++ L D KL+ KH I VV+DR + D R+ +S ET L+ G V D Sbjct: 189 QIYTLDDEIKLDKNTKHNISVVIDRIIINKDNQTYSRIVDSIETIDRLTNGKIEVLKED- 247 Query: 240 PKAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPE 299 L FS N C CG+S+ ELEPRLFSFN+P G+C C GLG D D++I + + Sbjct: 248 --GTILNFSKNHGCDKCGFSISELEPRLFSFNSPLGSCSYCKGLGFSYEPDVDKIIADSK 305 Query: 300 LSLAGGAIRGWDRRNFYY-----FQMLKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKE 354 LS+ GAI + +N + +Q SL +HYK ++ P L + ++L GS E Sbjct: 306 LSINQGAIDIF--KNIVHGTSLDWQRFLSLVNHYKIPLDKPIEQLDKSQLNLILEGS-DE 362 Query: 355 NIEFKYMNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGTRL 414 IE K +++ G +IR +EG+ + ++RR+ ET S RE + ++S C C G +L Sbjct: 363 PIEIKTISNSGAKNIRFEHYEGIANLIKRRHLETNSQVSREWYSAYMSEITCKKCHGKKL 422 Query: 415 RREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNVG 474 ++A V + + + +++SI +++F L+L ++ KI E LKEI +RL FL NVG Sbjct: 423 IKDALSVKLGGIDIISFTELSIDKSIDFLLKLELNDEQKKIGELALKEIINRLSFLKNVG 482 Query: 475 LNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHL 534 L+YL L+R A TLSGGEAQRIRLA+QIG+ L GV+YV+DEPSIGLHQ+DN RL+ T++ + Sbjct: 483 LDYLNLARRASTLSGGEAQRIRLATQIGSQLTGVLYVMDEPSIGLHQKDNMRLIKTMMVM 542 Query: 535 RDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSG 594 RDLGNT++VVEHD + + AAD++IDIGP AG GGE+VA G +M S+TGQY+SG Sbjct: 543 RDLGNTLLVVEHDSETMLAADYLIDIGPKAGNEGGELVACGTPLQVMENSNSITGQYLSG 602 Query: 595 KRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTL 654 K++I +PK R N + ++ + GA+ NNLK++ +T+P+ ITGVSGSGKS+LIN TL Sbjct: 603 KKQISIPKNRHSGNGKTII-IKGAKVNNLKNINVTIPLNKLVLITGVSGSGKSSLINQTL 661 Query: 655 FPIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVREL 714 P +R L + + Y++I G + DK+I + Q PIGRTPRSNPATY VF +R+L Sbjct: 662 VPALERILYRKGVKKDT-YKEIIGANNIDKIIVVSQDPIGRTPRSNPATYISVFDDIRDL 720 Query: 715 FAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRE 774 FA E++ARGYT RFSFNV GGRC+ C GDGVI++EMHFLPD+YV C+ C GK+YN + Sbjct: 721 FANTKEAKARGYTNSRFSFNVPGGRCDKCFGDGVIRIEMHFLPDVYVKCEVCNGKKYNSQ 780 Query: 775 TLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGE 834 TLEIKY GK+I +VL M+ +EA EFF A+P ++RKL+ L DVGL Y++LG + T LSGGE Sbjct: 781 TLEIKYLGKSIFDVLQMSCKEAYEFFKAIPNISRKLRLLCDVGLEYLQLGINVTFLSGGE 840 Query: 835 AQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDV 894 AQR+KL++ L K+ TG+TL++LDEP+TGLH DI +LL ++ ++ G+T+VVIEHNLD+ Sbjct: 841 AQRIKLSKFLQKKSTGKTLFVLDEPSTGLHLEDINKLLTIIQRIIKNGDTVVVIEHNLDI 900 Query: 895 IKTADWIVDLGPEGGSGGGEILVSGTPET-VAECEASHTARFLKPML 940 IK AD+I+DLGPEGG GG+I+ GTPE + + S+TA++L +L Sbjct: 901 IKVADYIIDLGPEGGDNGGQIVAQGTPEQLINQVNKSYTAQYLSKIL 947 >UniRef50_D0LQB5 Excinuclease ABC, A subunit n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LQB5_HALO1 Length = 996 Score = 938 bits (2424), Expect = 0.0, Method: Compositional matrix adjust. Identities = 506/999 (50%), Positives = 662/999 (66%), Gaps = 73/999 (7%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 63 + VRGAR HNL N+++ IPRD L+V+TG SGSGKSSLAFDT+YAEGQRRYVESLSA+ARQ Sbjct: 5 LSVRGARVHNLANVDIDIPRDALVVITGPSGSGKSSLAFDTIYAEGQRRYVESLSAHARQ 64 Query: 64 FLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCPDH 123 +L LM +P+ D IEGLSPAI+I Q S NPRS+VGT+TEI+DYLRLL+ARVG C Sbjct: 65 YLELMARPECDSIEGLSPAIAIAQHSAVRNPRSSVGTLTEIYDYLRLLYARVGTVHCYQC 124 Query: 124 DVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARIDGEV 183 +AA TVS++VD + G R +++AP+I+ G H L L GY RA +DG + Sbjct: 125 GRVIAANTVSEIVDRTMELGTGARFIVVAPVIRGVAGTHADALGALLQAGYPRAVVDGTL 184 Query: 184 CDLSDP-PKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVADMDDPKA 242 DL++ P+L+ HT+E+ VDR V+D +++RLA+S E AL L+ G + + A Sbjct: 185 LDLAEGIPELDEHAPHTVEIHVDRLIVKDGISRRLADSLELALGLADGQVWIHPV---GA 241 Query: 243 EELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPELSL 302 E +S FAC CG S ELEPR+FSFN+P GAC CDGLG DP RVI PELSL Sbjct: 242 EPERYSQRFACLACGISYPELEPRMFSFNSPHGACQRCDGLGELAALDPARVIPAPELSL 301 Query: 303 AGGAIRGWDRRNFYYFQMLKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKENIEFKYMN 362 + GAI R+ + + + +++ PW LSA H+ + G + + + Sbjct: 302 SAGAIAPLPPRS-ALGRRVAAACAARGIELDTPWRELSAE-HQAFVLGGADDTV----IG 355 Query: 363 DRGDTSI------------------RRHPFEGVLHNM----------------------- 381 D+S R PFEGVL + Sbjct: 356 QSSDSSTKTPAKTAKTKTTAKKAAARDRPFEGVLALLATELAEAEPREGDDPSDGERASK 415 Query: 382 -------ERRYKETESSAVREELAKFISNRPCASCEGTRLRREARHVYVENTPLPAISDM 434 +R K + ++ +EL + PC +CEGTRLR EARHV V LPA+ + Sbjct: 416 AKGKVTGKRPGKRSTAALSLDELRTCVRELPCPACEGTRLRVEARHVTVGGLALPAVCRL 475 Query: 435 SIGHAMEFFNNL-------KLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTLSRSAETL 487 + A+ FF L L+ QRA IAE++L+EI RL FL VGL YL+L+R A TL Sbjct: 476 PLDEALAFFTELGQSDGEHSLSPQRAAIAERLLREIAGRLGFLQRVGLGYLSLARRASTL 535 Query: 488 SGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHD 547 SGGE+QRIRLA+QIGA LVGV+YVLDEPS+GLH RD RL+ L+ LRDLGNTV+VVEHD Sbjct: 536 SGGESQRIRLATQIGASLVGVLYVLDEPSVGLHPRDTRRLIDALLRLRDLGNTVLVVEHD 595 Query: 548 EDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEVPKKRVPA 607 D +RAAD+++DIGPGAGVHGG VVA GP +MA P SLTGQY+SG R + VP +R Sbjct: 596 PDTMRAADYLVDIGPGAGVHGGRVVAHGPPAQVMADPASLTGQYLSGARALAVPPQR--R 653 Query: 608 NPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGAT- 666 L+L G R +NL+ V + +P+G C+TGVSGSGKS+LI TL P + +L G Sbjct: 654 GGAHALRLEGVRTHNLRGVDVAIPLGALVCVTGVSGSGKSSLITGTLLPALRARLTGGAR 713 Query: 667 -----IAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPES 721 + + + I+G++ D+V+ +DQ+PIGRTPRSNPATYTGVF +RE FA +PES Sbjct: 714 GASRGVLDDGDFDAIRGVDQVDRVLSVDQAPIGRTPRSNPATYTGVFALIRERFAALPES 773 Query: 722 RARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKYK 781 +ARGY GR+SFNV+GGRCEACQGDGV+++EM+FLPD+YV C+ C G R++RETL+++YK Sbjct: 774 KARGYKSGRYSFNVKGGRCEACQGDGVLRIEMNFLPDVYVTCESCGGTRFSRETLDVRYK 833 Query: 782 GKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLA 841 G I EVL + ++EA F+ AVP + +L+ L DVGL Y+ LGQ A TLSGGEAQR+KL+ Sbjct: 834 GLNIAEVLALRVDEALSFWQAVPQIRVRLEALRDVGLGYLTLGQPANTLSGGEAQRLKLS 893 Query: 842 RELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADWI 901 REL+K+ TG+T+YILDEPTTGLHF D+++LL VL L +QGNT++VIEH+LDVIKTAD + Sbjct: 894 RELAKKSTGRTIYILDEPTTGLHFEDVRRLLHVLELLVEQGNTVLVIEHDLDVIKTADHV 953 Query: 902 VDLGPEGGSGGGEILVSGTPETVAECEASHTARFLKPML 940 +D+GPEGG+ GG I+ +GTPE +A SHT R L P+L Sbjct: 954 IDVGPEGGAAGGAIVAAGTPEDIAAAADSHTGRLLAPLL 992 >UniRef50_C1ZII9 UvrA family protein n=39 Tax=Bacteria RepID=C1ZII9_PLALI Length = 2434 Score = 938 bits (2424), Expect = 0.0, Method: Compositional matrix adjust. Identities = 493/994 (49%), Positives = 662/994 (66%), Gaps = 61/994 (6%) Query: 3 KIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYAR 62 +I +RGAR HNL++++LV+P++KLIV+TG+SGSGKSSLAFDTLYAEGQRRY+ESLS YAR Sbjct: 5 EITIRGAREHNLRDVSLVLPKNKLIVMTGVSGSGKSSLAFDTLYAEGQRRYIESLSTYAR 64 Query: 63 QFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCPD 122 QFL M KPDVD I GL+P+ISI+QK+ NPRSTVGTITEI+DYLR+LFARVG+ C Sbjct: 65 QFLGSMPKPDVDSITGLAPSISIQQKTAGRNPRSTVGTITEIYDYLRVLFARVGQAECHQ 124 Query: 123 HDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARIDGE 182 P+ +Q+ +V+ +L P G + +LAP+I+ +KGE +L QGY+RAR+DG+ Sbjct: 125 CHRPITSQSPENIVEQILILPAGTKFQILAPLIQRQKGEFKDLFVDLLKQGYLRARVDGK 184 Query: 183 VCDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGG------------ 230 LS+ +L+ Q KHTI+VV+DR QR+AE+ E AL+L+ G Sbjct: 185 FISLSESLQLDKQMKHTIDVVIDRLVAGKSTRQRVAEAVENALKLANGQLIVLQDSPEEF 244 Query: 231 --TAVVADMDDPKAE---ELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGV 285 A+ ++ D P E E F+ +AC CG S P+LFSFN+P G C C+GLG+ Sbjct: 245 LSAAIQSEDDSPSQENPSEQFFATAYACTHCGISYDPPSPQLFSFNSPQGMCADCNGLGM 304 Query: 286 QQYFDPDRVIQNPELSLAGGAIR--------GWDRRNF---YYFQMLKSLADHYKFDVEA 334 + F DR+I + LS+ GA+ G RR+ + K+L+ ++ Sbjct: 305 RHDFLLDRLIPDESLSIQKGALALSGKLSKLGRWRRHLIDGVAAAIEKTLSLKPGEFLKT 364 Query: 335 PWGSLSANVHKVVLYGSGKENIEFKYMNDRGDTSIRRH--PFEGVLHNMERRYKETESSA 392 PW L + L G G +++ + + + G + +H + G + + Y++ ++ Sbjct: 365 PWNELPQGARDLFLDGLGNQHVTYSFKHSGG---VWKHGGKYTGYVRELLEEYRKAKNPM 421 Query: 393 VREELAKFISNRPCASCEGTRLRREARHVYVEN------TP------------------- 427 R +L K++ C++C G+RL +A + ++ + TP Sbjct: 422 RRRQLEKYMEVVGCSTCHGSRLNAQACNYFISSQALEMTTPAIARSGSSSAASQAKKQRL 481 Query: 428 -LPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTLSRSAET 486 LP + +S+G A EFF L L IAE++LKEI RL FL+ GL+YL L R+A T Sbjct: 482 SLPGVCHLSVGEAFEFFEQLDLDPTSQYIAEEVLKEIRGRLGFLLRCGLDYLALDRTAPT 541 Query: 487 LSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEH 546 LSGGE+QRIRLA QIG GLVGV+Y+LDEPSIGLH RDNE LLG+L LRD GNTVIVVEH Sbjct: 542 LSGGESQRIRLAGQIGCGLVGVVYILDEPSIGLHPRDNEMLLGSLQDLRDQGNTVIVVEH 601 Query: 547 DEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEVPKKRVP 606 D++ ++AADH+ID GPG GV GG+VV EG LEA++A ES TG Y+SG+++IE+ + R Sbjct: 602 DDETMKAADHIIDFGPGPGVRGGKVVHEGSLEALLANEESETGAYLSGRKQIEIRETRRS 661 Query: 607 ANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGAT 666 + + G +NL++V + P+G F C+TGVSGSGKS+LIND L+P+ R++N Sbjct: 662 GIGTSI-SIQGCTHHNLQNVDVEFPLGKFICVTGVSGSGKSSLINDILWPLLNREVNLGE 720 Query: 667 IAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESRARGY 726 A P ++ L DK IDIDQSPIGRTPRSNP TY +F +R+L+ +P+S+ RG+ Sbjct: 721 GA-PGAHQSFDNLALVDKAIDIDQSPIGRTPRSNPTTYVKLFDLIRDLYTQLPDSKTRGF 779 Query: 727 TPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKYKGKTIH 786 PGRFSFNV GGRCEAC+G G K+EM FL DI+V C C+G+R+N+ETLE+++KGK I Sbjct: 780 KPGRFSFNVPGGRCEACEGHGSNKLEMDFLADIWVTCPVCQGRRFNKETLEVRFKGKNIA 839 Query: 787 EVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSK 846 EVLDM ++ A E F+ +P + LQTL DVGL YI+LGQ + TLSGGEAQR+KLA+EL K Sbjct: 840 EVLDMDVQTALEHFENLPKIKNLLQTLHDVGLDYIKLGQPSPTLSGGEAQRIKLAKELGK 899 Query: 847 RGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADWIVDLGP 906 R TG+T+YILDEPTTGLHF DI LL VLH D GNT++V+EHNLDVIKTADW++DLGP Sbjct: 900 RSTGKTVYILDEPTTGLHFVDIAHLLRVLHGFVDAGNTVIVVEHNLDVIKTADWVIDLGP 959 Query: 907 EGGSGGGEILVSGTPETVAECEASHTARFLKPML 940 EGG GGG I+ GTPE VA+CEAS+T RFL +L Sbjct: 960 EGGKGGGRIIAQGTPEMVAQCEASYTGRFLARVL 993 Score = 871 bits (2250), Expect = 0.0, Method: Compositional matrix adjust. Identities = 465/981 (47%), Positives = 620/981 (63%), Gaps = 65/981 (6%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 63 I +RGA HNL+ I+L IPRD++ V G SGSGK+SLA DTLYAEGQRRYVESLS+YARQ Sbjct: 1071 IVIRGASQHNLQKISLDIPRDQMSVFCGPSGSGKTSLAMDTLYAEGQRRYVESLSSYARQ 1130 Query: 64 FLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCPDH 123 FL M KP V+HI GL P+I+IEQK+ H PRSTVGT TEI+DYLR+L+AR+G CPD Sbjct: 1131 FLGQMPKPKVEHIHGLQPSIAIEQKTVGHTPRSTVGTTTEIYDYLRVLYARLGTQHCPDC 1190 Query: 124 DVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARIDGEV 183 + + +QT ++D ++++PEG RL++LAP ++ K E L QG+ R R+DG Sbjct: 1191 RIAVESQTTDDVIDLLMAKPEGTRLLVLAPQEVPVGQQYAKVWERLKEQGFSRVRVDGTT 1250 Query: 184 CDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVADMDDPKAE 243 L + P+++ ++KH +E+V+DR + +RLA+S E A + G VA +DD K E Sbjct: 1251 YRLEEVPEIDRRRKHVVEIVIDRVTIASGSRRRLADSVEAAFDQGKGVIRVAFVDDDKPE 1310 Query: 244 ELL----FSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPE 299 FS AC CG S L P FSFN+P G C +C+GLG QQ + +I +P Sbjct: 1311 NSWKVQPFSLFRACSQCGRSFETLAPHNFSFNSPLGWCESCEGLGTQQGTNLAALIGDPT 1370 Query: 300 LSLAGGAIRGWD--RRNFYYFQMLKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKENIE 357 +L GAI W R++ F++L +L+ ++ P+ L ++VL+G+G++ Sbjct: 1371 RTLREGAISAWPDPRQSPAMFELLDALSRGVGLSLDTPFNQLEPAEQRLVLFGAGEQWFT 1430 Query: 358 FKYMND-------------------RGDTSIR-RHPFEGVLHNMERRYKETESSAVREEL 397 + D +++ R F+G+ +E + S + R+ L Sbjct: 1431 VYQVAQPAAAKKSSTKAAAKSKKSSTADQAVKYRFQFKGLYPALEEASRV--SYSFRQSL 1488 Query: 398 AKFISNRPCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAE 457 I PC+SC G+RLR +A V ++ L + ++ + A EF + L L + KIA Sbjct: 1489 FDLIGEVPCSSCSGSRLREDASAVRLQGKTLQQLCELPLNKAQEFLHGLTLNKTQQKIAG 1548 Query: 458 KILKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSI 517 +L+E RL FLV+VGL+YLTLSR+ TLSGGE+QRIRLA Q+G L GV+YVLDEP+I Sbjct: 1549 DLLEEGAGRLDFLVDVGLHYLTLSRTLPTLSGGESQRIRLAGQLGRALTGVLYVLDEPTI 1608 Query: 518 GLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPL 577 GLH DN RLL L LRDLGNTV++VEHD + + AAD + D GPG+G GG V AEG Sbjct: 1609 GLHPSDNGRLLQALKKLRDLGNTVVLVEHDREVLAAADRLYDFGPGSGRLGGLVTAEGTP 1668 Query: 578 EAIMAVPESLTGQYMSGKRKIEVP-KKRVPA----------------------------- 607 I +SLTG+++S K I VP ++RVPA Sbjct: 1669 HEIEHCDDSLTGRFLSLKEDILVPTERRVPARFGRSQAPVDRAKSGAATKGKAKAQVAAT 1728 Query: 608 ------NPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQ 661 P L+L GAR NNL++V L +P+G T ITGVSGSGKS+LI DTL R+ Sbjct: 1729 TKASASKPLFWLELIGARQNNLRNVDLRIPLGALTAITGVSGSGKSSLIADTLGKAIARK 1788 Query: 662 LNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPES 721 L+ ++ +P PY ++ GL++ K+I +DQ P+G TP SNPATYTGVF +RELFA +PES Sbjct: 1789 LHRSS-EQPGPYDELLGLDYLSKLIVVDQQPLGNTPASNPATYTGVFEHIRELFAHLPES 1847 Query: 722 RARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKYK 781 + RGY P RFSFN GGRCE C+G+G +EMHFLPD++V CD C G+RYN ETL +K++ Sbjct: 1848 KVRGYRPARFSFNRAGGRCETCEGNGQKLIEMHFLPDLWVECDTCHGRRYNPETLAVKFQ 1907 Query: 782 GKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLA 841 GK I +VL+M I EA + F++ P + L L +GL Y+ LGQ A TLSGGEAQRVKLA Sbjct: 1908 GKNIADVLEMPISEAVKLFESFPKIRGPLAVLDAIGLGYLTLGQPAPTLSGGEAQRVKLA 1967 Query: 842 RELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADWI 901 EL++ TG TLY+LDEPTTGLHF DI++LL +L L D GNT+VVIEHNLDVIKT DWI Sbjct: 1968 AELARPSTGSTLYLLDEPTTGLHFDDIRKLLKILQSLVDAGNTVVVIEHNLDVIKTCDWI 2027 Query: 902 VDLGPEGGSGGGEILVSGTPE 922 VDLGP GS GG I+ +GTPE Sbjct: 2028 VDLGPAAGSEGGYIVATGTPE 2048 Score = 147 bits (370), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 77/190 (40%), Positives = 113/190 (59%), Gaps = 15/190 (7%) Query: 761 VPCDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFF--------------DAVPAL 806 VPC C G R + ++ +GKT+ ++ ++ + +A+EF D + Sbjct: 1495 VPCSSCSGSRLREDASAVRLQGKTLQQLCELPLNKAQEFLHGLTLNKTQQKIAGDLLEEG 1554 Query: 807 ARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFA 866 A +L L+DVGL Y+ L ++ TLSGGE+QR++LA +L + TG LY+LDEPT GLH + Sbjct: 1555 AGRLDFLVDVGLHYLTLSRTLPTLSGGESQRIRLAGQLGRALTG-VLYVLDEPTIGLHPS 1613 Query: 867 DIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAE 926 D +LL L KLRD GNT+V++EH+ +V+ AD + D GP G GG + GTP + Sbjct: 1614 DNGRLLQALKKLRDLGNTVVLVEHDREVLAAADRLYDFGPGSGRLGGLVTAEGTPHEIEH 1673 Query: 927 CEASHTARFL 936 C+ S T RFL Sbjct: 1674 CDDSLTGRFL 1683 Score = 146 bits (368), Expect = 5e-33, Method: Compositional matrix adjust. Identities = 116/379 (30%), Positives = 173/379 (45%), Gaps = 82/379 (21%) Query: 406 CASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGD 465 C C+G R +E V + + + DM + A+E F NL +I + Sbjct: 816 CPVCQGRRFNKETLEVRFKGKNIAEVLDMDVQTALEHFENLP--------------KIKN 861 Query: 466 RLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVG-VMYVLDEPSIGLHQRDN 524 L+ L +VGL+Y+ L + + TLSGGEAQRI+LA ++G G +Y+LDEP+ GLH D Sbjct: 862 LLQTLHDVGLDYIKLGQPSPTLSGGEAQRIKLAKELGKRSTGKTVYILDEPTTGLHFVDI 921 Query: 525 ERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVP 584 LL L D GNTVIVVEH+ D I+ AD VID+GP G GG ++A+G E + Sbjct: 922 AHLLRVLHGFVDAGNTVIVVEHNLDVIKTADWVIDLGPEGGKGGGRIIAQGTPEMVAQCE 981 Query: 585 ESLTGQYMS---------------------------GKRK---------IEVPKKRV--- 605 S TG++++ G +K +E+P+K V Sbjct: 982 ASYTGRFLARVLEASGRSISQPVSLGSAATSTGKGQGTKKRRKSTADHVVEMPQKSVART 1041 Query: 606 ---------PANPEKVLKLT-------------GARGNNLKDVTLTLPVGLFTCITGVSG 643 P+ + L L GA +NL+ ++L +P + G SG Sbjct: 1042 FPPETKVASPSRWQAALPLKQQDREAQTNIVIRGASQHNLQKISLDIPRDQMSVFCGPSG 1101 Query: 644 SGKSTLINDTLFPIAQRQL------NGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTP 697 SGK++L DTL+ QR+ P ++ + I I+Q +G TP Sbjct: 1102 SGKTSLAMDTLYAEGQRRYVESLSSYARQFLGQMPKPKVEHIHGLQPSIAIEQKTVGHTP 1161 Query: 698 RSNPATYTGVFTPVRELFA 716 RS T T ++ +R L+A Sbjct: 1162 RSTVGTTTEIYDYLRVLYA 1180 Score = 120 bits (300), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 76/213 (35%), Positives = 111/213 (52%), Gaps = 26/213 (12%) Query: 406 CASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGD 465 C +C G R E V + + + +M I A++ F + +I Sbjct: 1889 CDTCHGRRYNPETLAVKFQGKNIADVLEMPISEAVKLFESFP--------------KIRG 1934 Query: 466 RLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVG-VMYVLDEPSIGLHQRDN 524 L L +GL YLTL + A TLSGGEAQR++LA+++ G +Y+LDEP+ GLH D Sbjct: 1935 PLAVLDAIGLGYLTLGQPAPTLSGGEAQRVKLAAELARPSTGSTLYLLDEPTTGLHFDDI 1994 Query: 525 ERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVP 584 +LL L L D GNTV+V+EH+ D I+ D ++D+GP AG GG +VA G P Sbjct: 1995 RKLLKILQSLVDAGNTVVVIEHNLDVIKTCDWIVDLGPAAGSEGGYIVATG-------TP 2047 Query: 585 ESLTGQYMSGKRKIEVPKKRVPANPEKVLKLTG 617 E L + G+ + P K+ NP++ + LT Sbjct: 2048 EDLV-RIAQGEVPDDDPSKK---NPQQHVSLTA 2076 >UniRef50_Q2SR90 Excinuclease ABC, A subunit n=5 Tax=Bacteria RepID=Q2SR90_MYCCT Length = 946 Score = 934 bits (2415), Expect = 0.0, Method: Compositional matrix adjust. Identities = 461/947 (48%), Positives = 663/947 (70%), Gaps = 15/947 (1%) Query: 2 DKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYA 61 DKI ++GAR HNLKNI+L +P++KLIV TGLSGSGKSSLAF T+Y EG+RRY+ESLSAYA Sbjct: 4 DKIIIKGAREHNLKNIDLELPKNKLIVFTGLSGSGKSSLAFSTIYQEGRRRYIESLSAYA 63 Query: 62 RQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCP 121 RQFL EKPDVD IEGLSPAISI+QK+TSHNPRSTVGT+TEI+DYLRLL+AR+G+P C Sbjct: 64 RQFLGGNEKPDVDSIEGLSPAISIDQKTTSHNPRSTVGTVTEIYDYLRLLYARIGQPYCI 123 Query: 122 DHDVPLAAQTVSQMVDNV-LSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARID 180 ++ + A ++ ++V+N+ S +G+++ +L+P+I+++KG H LE L + G+IR +D Sbjct: 124 NNHGQIKAVSIKEIVENIKQSTSDGEQIHILSPVIRDKKGTHIDILEKLRNDGFIRVIVD 183 Query: 181 GEVCDLSDPPKLELQKKHTIEVVVDR--FKVRDDLTQRLAESFETALELSGGTAVVADMD 238 ++ L D LE ++H I++VVDR + D++ R+ + E L+ S +A Sbjct: 184 DQLRMLDDQINLEKNQRHNIDIVVDRIIYHNNDEINSRIFTAVEMGLKYSNNLIKIA-FP 242 Query: 239 DPKAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNP 298 + +E LFS +F+C +C + + ELEPRLFSFN P GAC C+GLGV D + ++ + Sbjct: 243 NSNKQEKLFSTSFSCKVCDFVVPELEPRLFSFNAPLGACELCNGLGVSLEPDINLILPDL 302 Query: 299 ELSLAGGAIRGWDRRNFYY-----FQMLKSLADHYKFDVEAPWGSLSANVHKVVLYGSGK 353 +LS+ G + + +NF + +Q + L D+Y D+ P L+ ++L+GS + Sbjct: 303 KLSINQGGVVYY--KNFMHTKNIEWQKFRILCDYYYIDLNTPLKDLTQKQRDIILWGSDR 360 Query: 354 ENIEFKYMNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGTR 413 E I+ K + + + + EG ++RRY E++S R+ +KF+S++ C C+G+R Sbjct: 361 E-IDIKIVTENNNKYEKYDFIEGNAALIKRRYFESKSEEARKWYSKFMSSKICKQCKGSR 419 Query: 414 LRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNV 473 L A V + + ++MSI ++F N+ L +A IA+ +L EI R FL V Sbjct: 420 LNDIALSVKINEKSIFDYTNMSISEQLDFLLNIDLTPTQAMIAKLVLDEIISRTNFLNEV 479 Query: 474 GLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIH 533 GL YL LSR+A TLSGGE+QRIRLA QIG+ L G++YVLDEPSIGLHQ+DN++L+ TL H Sbjct: 480 GLGYLNLSRTATTLSGGESQRIRLAKQIGSQLTGILYVLDEPSIGLHQKDNDKLIKTLKH 539 Query: 534 LRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMS 593 LRDLGNT+IVVEHDED ++++D ++DIGP AG +GGE+ G + I+ +++TG+Y+S Sbjct: 540 LRDLGNTLIVVEHDEDTMKSSDWIVDIGPRAGEYGGEITFSGTYQDILK-SDTITGRYLS 598 Query: 594 GKRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDT 653 K I VPK R N +K+ ++ GA NNLK++ +T+P+ F ITGVSGSGKSTL+ D Sbjct: 599 RKEGIVVPKIRRGGNGKKI-EIIGASENNLKNINVTIPLNKFITITGVSGSGKSTLLEDI 657 Query: 654 LFPIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRE 713 ++ L+ + ++I+G+E+ +K I I Q PIG+TPRSNPATYT VF +R+ Sbjct: 658 VYKGIHNNLSKEYLP-IGKVKEIKGIENINKAIYISQEPIGKTPRSNPATYTSVFDDIRD 716 Query: 714 LFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNR 773 LF +PE++ RGY GRFSFNV GGRCE CQGDGVI + M F+P + V C+ C+GKRYN Sbjct: 717 LFTNLPEAKIRGYKKGRFSFNVHGGRCEHCQGDGVITISMQFMPSVEVVCEICEGKRYND 776 Query: 774 ETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGG 833 ETL +KYK K+I +VL+M++ EA FF+ +P + +KL+T+++VGL YI+LGQ+ATTLSGG Sbjct: 777 ETLTVKYKNKSIADVLNMSVSEAYVFFENIPQIKQKLETILEVGLGYIKLGQNATTLSGG 836 Query: 834 EAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLD 893 E+QR+KL+ L K+ TG T+++LDEPTTGLH D+++L+ VL+KL D GNT++ IEHNLD Sbjct: 837 ESQRIKLSTYLLKKQTGNTMFLLDEPTTGLHVDDVKRLIGVLNKLVDLGNTVLCIEHNLD 896 Query: 894 VIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLKPML 940 IK +D I+DLGP+GG GG+++V+GTPE + S+TA++LK + Sbjct: 897 FIKVSDHIIDLGPDGGEYGGQVVVTGTPEQIINHPTSYTAKYLKDYI 943 >UniRef50_D1PT12 Excision endonuclease subunit UvrA n=3 Tax=Bacteria RepID=D1PT12_9BACT Length = 1003 Score = 923 bits (2385), Expect = 0.0, Method: Compositional matrix adjust. Identities = 471/937 (50%), Positives = 662/937 (70%), Gaps = 12/937 (1%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 63 I+V GAR HNLK I++ IPR+ L V+TGLSGSGKSSLAFDT++AEGQRRY+E+ SAYAR Sbjct: 75 IDVLGARVHNLKGIDVSIPRNSLTVITGLSGSGKSSLAFDTIFAEGQRRYIETFSAYARN 134 Query: 64 FLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCPDH 123 FL ME+PDV+ I GLSP ISIEQK+T+ NPRSTVGT TEI+DYLRLL+AR G Sbjct: 135 FLGNMERPDVEKITGLSPVISIEQKTTNKNPRSTVGTTTEIYDYLRLLYARAGTAYSYMS 194 Query: 124 DVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARIDGEV 183 + T +++D +LS +G + +LAP++++RKG + + +++ +GY+ R+DGEV Sbjct: 195 GEKMVKYTEEKVIDMILSDYDGHAIYILAPLVRQRKGHYRELFDSMRRKGYLYIRVDGEV 254 Query: 184 CDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVADMDDPKAE 243 ++ K++ K H IEVV+D+ KV+ +RL S +TA++ G VVA MD Sbjct: 255 KEIVRGMKVDRYKNHNIEVVIDKLKVQGKDDERLKHSVQTAMK--QGDGVVAVMDKESGA 312 Query: 244 ELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPELSLA 303 FS P+ G S E P +FSFN+P GACP C GLG D +VI N +LS+ Sbjct: 313 VRNFSKRLMDPVTGLSYGEPAPNIFSFNSPEGACPHCKGLGYVSVIDMKKVIPNDKLSIR 372 Query: 304 GGAIRGWDR-RNFYYFQMLKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKE-NIEFKYM 361 GAI + +N F L+++ ++Y+ D++ P+ + + ++ G+ + I + + Sbjct: 373 EGAIAPLGKYKNQMIFWQLEAILNNYECDLKTPFKDIPQDAVDEIMNGTLETVRIPKEVV 432 Query: 362 NDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGTRLRREARHV 421 + D + F+GV+ + + +S+A ++ A+F+++ C C+G RL+RE+ Sbjct: 433 HTSSDYFV---TFDGVVKYLRTVMEADDSAASQKWAAQFLADAVCPECKGMRLKRESLSY 489 Query: 422 YVENTPLPAISDMSIGHAMEFFNNLK--LAGQRAKIAEKILKEIGDRLKFLVNVGLNYLT 479 + + + +S++ + E+ +++ L Q+ KIA +I+KE+ R+ FL+ VGL+YL Sbjct: 490 RIGDENISEVSNLDMTDLREWLAHVEEHLGKQQQKIAHEIVKELCTRVDFLLEVGLDYLA 549 Query: 480 LSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGN 539 L+R + TLSGGE+QRIRLA+QIG+ LV V+Y+LDEPSIGLHQRDN RL+ +L LRDLGN Sbjct: 550 LNRQSGTLSGGESQRIRLATQIGSQLVNVLYILDEPSIGLHQRDNHRLISSLKELRDLGN 609 Query: 540 TVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIE 599 TVIVVEHDED +RAAD +IDIGP AG GGEVV +G E ++ +++T QY++G+R+IE Sbjct: 610 TVIVVEHDEDMMRAADWIIDIGPRAGRKGGEVVFQGTPEEMLKT-QTITAQYLNGERQIE 668 Query: 600 VPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQ 659 +P+ R N K +++ GA GNNLK++ + P+G +TGVSGSGKSTL+N+TL PI Sbjct: 669 IPEHRRKGNG-KSIRIIGAHGNNLKNINVEFPLGKLIVVTGVSGSGKSTLVNETLQPILS 727 Query: 660 RQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVP 719 + ++ P PY +G+++ DKV+D+DQSPIGRTPRSNPATYTGVFT +R LF +P Sbjct: 728 QHFY-RSLKNPMPYEKAEGIDNIDKVVDVDQSPIGRTPRSNPATYTGVFTDIRNLFVNLP 786 Query: 720 ESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIK 779 E++ RGY PGRFSFNV+GGRCE C G+G +EM+FLP++ VPC+ C GKRYNRETLE++ Sbjct: 787 EAKIRGYKPGRFSFNVKGGRCETCGGNGYKTIEMNFLPNVMVPCEVCHGKRYNRETLEVR 846 Query: 780 YKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVK 839 +KGK+I +VLDMTI +A EFF+ VP + K++TL DVGL Y++LGQS+TTLSGGE+QRVK Sbjct: 847 FKGKSIADVLDMTINQAVEFFENVPTILPKIKTLQDVGLGYVKLGQSSTTLSGGESQRVK 906 Query: 840 LARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTAD 899 LA EL+KR TG+TLYILDEPTTGLHF DI+ L+DVL KL D+GNT+++IEHNLDVI+ AD Sbjct: 907 LATELAKRDTGKTLYILDEPTTGLHFEDIRILMDVLQKLVDRGNTVIIIEHNLDVIRLAD 966 Query: 900 WIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFL 936 I+D+GP GG GGGE+L +GTPE VA+ + T +++ Sbjct: 967 HIIDIGPLGGRGGGEVLTTGTPEEVAKSKKGFTPKYI 1003 >UniRef50_Q2RZZ5 Excinuclease ABC, A subunit n=1 Tax=Salinibacter ruber DSM 13855 RepID=Q2RZZ5_SALRD Length = 1016 Score = 920 bits (2378), Expect = 0.0, Method: Compositional matrix adjust. Identities = 480/985 (48%), Positives = 651/985 (66%), Gaps = 50/985 (5%) Query: 2 DKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYA 61 + I +RGAR +NL+ I+L IPR++L+VVTGLSGSGKSSLAFDT++AEGQRRY+ESLSAYA Sbjct: 3 EHITLRGARENNLQAIDLDIPRNRLVVVTGLSGSGKSSLAFDTIFAEGQRRYMESLSAYA 62 Query: 62 RQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCP 121 RQFL +ME+P++D+++GLSP ISIEQK+ S NPRSTVGT+TE++D+LRLL+AR Sbjct: 63 RQFLEMMERPEIDYVDGLSPVISIEQKTVSGNPRSTVGTVTEVYDFLRLLYARAATAYSH 122 Query: 122 DHDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARIDG 181 + + Q+ ++VD +L PEG RL +LAP+++ RKG + + E ++QG+ R R+DG Sbjct: 123 ETGNRMRQQSDDEIVDGILDFPEGTRLQILAPVVRGRKGHYRELFEQTSAQGFERFRVDG 182 Query: 182 EVCDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVADMDDPK 241 E+ + KLE H +EVV+DR ++D + R+++S ETALE+ GGT + +D P Sbjct: 183 EMRTYEEDMKLERYATHDVEVVIDRLAIKDGIRSRVSQSVETALEMGGGTLIADVVDGPD 242 Query: 242 AEEL---LFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNP 298 E LFS + P G S E P +FSFN P GACP C+GLG + P+ V+ +P Sbjct: 243 GVETGDHLFSRDLVDPETGLSYEEPSPNMFSFNTPYGACPECEGLGTAKQIAPELVVPHP 302 Query: 299 ELSLAGGAIRGW-DRRNFYYFQMLKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKENIE 357 E ++ GA+ + R+ + F L+++A+ Y FD + P +LS V+L G+G+E E Sbjct: 303 EKTINEGALAPLGEPRDIWIFNQLEAVAEAYDFDFDTPIEALSDEQLAVILEGAGEEQFE 362 Query: 358 FKYMNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGTRLRRE 417 +Y +G +H F+G+ ++ Y+ET SS R F+ C +C G RL+ E Sbjct: 363 IEY-GYKGREVQYKHRFDGLYDHIWHTYEETSSSKKRRRAESFMREMDCPACGGGRLKTE 421 Query: 418 ARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQR-AKIAEKILKEIGDRLKFLVNVGLN 476 + H + + ++ M + +F ++ +R +I E I+KE+ +RL FL+ VG+ Sbjct: 422 SLHYRIGGKSIADLAQMDLTRLRDFVEDVPFDTERQTRIGEPIVKEVRERLDFLIGVGVG 481 Query: 477 YLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRD 536 YLTL R A TLSGGE+QRIRLA+Q+G L GV+YVLDEP+IGLH RDN+RL+ +L LRD Sbjct: 482 YLTLDRPARTLSGGESQRIRLATQVGTQLTGVLYVLDEPTIGLHPRDNDRLIESLESLRD 541 Query: 537 LGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVP------------ 584 LGN+V+VVEHD D I AADHV+D+GPGAG+HGG V+ GP + P Sbjct: 542 LGNSVVVVEHDRDMIEAADHVVDLGPGAGIHGGHVITTGPPSVLTVDPVEQTNGTAANGA 601 Query: 585 -----------------------------ESLTGQYMSGKRKIEVPKKRVPANPEKVLKL 615 ES T Y+ G+R I +P +R E + L Sbjct: 602 AEHEIEDNGVARQQVAERAADYDSDHYDFESFTAAYLQGERVIPLPDERRDGTGESI-TL 660 Query: 616 TGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAEPAPYRD 675 GA G+NLK + +P+G C+TGVSGSGKSTL+N TLFPI R + A P PY Sbjct: 661 KGATGHNLKGEDVDVPLGTLICVTGVSGSGKSTLVNQTLFPILHRHHHNAKTV-PLPYDR 719 Query: 676 IQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESRARGYTPGRFSFNV 735 ++G++H DKVI+IDQ PIGRTPRSN ATYT + +R+LFA +PE+ RGYT RFSFN Sbjct: 720 VEGIDHVDKVIEIDQQPIGRTPRSNAATYTKLMDYLRDLFAQLPEAEIRGYTKSRFSFNT 779 Query: 736 RGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEE 795 GRC+ C G G + +EM+FLPD+ V CD C GKRY ETLE++YKGK I EVLDMT+ E Sbjct: 780 DPGRCDKCGGTGTVTLEMNFLPDVDVTCDACDGKRYGPETLEVEYKGKNIAEVLDMTVAE 839 Query: 796 AREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYI 855 A +FF+ P L R L+TL VGL Y+ LGQS+TTLSGGEAQRVKL++ELS+ GTG TLYI Sbjct: 840 AVDFFENQPRLVRTLKTLDAVGLGYLTLGQSSTTLSGGEAQRVKLSKELSRPGTGDTLYI 899 Query: 856 LDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEI 915 LDEPTTG+HF D++ LL+VLH L D+GNT++VIEHN+DVIK AD ++DLGPEGG GGEI Sbjct: 900 LDEPTTGMHFEDVRHLLNVLHGLVDEGNTVMVIEHNMDVIKQADHVIDLGPEGGREGGEI 959 Query: 916 LVSGTPETVAECEASHTARFLKPML 940 L G PE +AE + +HT+ +L+ L Sbjct: 960 LFEGRPEALAEAD-THTSAYLREEL 983 >UniRef50_Q83NI8 Excinuclease ABC subunit A n=2 Tax=Tropheryma whipplei RepID=Q83NI8_TROW8 Length = 948 Score = 919 bits (2375), Expect = 0.0, Method: Compositional matrix adjust. Identities = 467/966 (48%), Positives = 647/966 (66%), Gaps = 54/966 (5%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 63 + V+ AR HNLKN+N+ IPR+ + V TGLSGSGKSSLAFDT++AEGQRRY+ESLSAYARQ Sbjct: 8 LRVKNARVHNLKNLNVRIPRNSMTVFTGLSGSGKSSLAFDTIFAEGQRRYIESLSAYARQ 67 Query: 64 FLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCPDH 123 FL +++P+VD I+GLSP+++I+QK+TS NPRSTVGT+TEI DYLRLL+ARVG CP+ Sbjct: 68 FLERLDRPEVDSIDGLSPSVAIDQKTTSRNPRSTVGTVTEIFDYLRLLWARVGVLHCPEC 127 Query: 124 DVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARIDGEV 183 D+P+ QT+ Q+VD++ P G+R MLL+P+++++KGE L + G+ R +D E+ Sbjct: 128 DLPVQKQTIQQIVDSIAKIPHGERFMLLSPLVRQKKGEFVDLFSRLTTSGFSRVVVDEEI 187 Query: 184 CDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVADMDDPKAE 243 L++ PKL+ +HTI+VVVDR D++ RL +S ETA LS + ++ K + Sbjct: 188 YLLTEVPKLKKNSRHTIKVVVDRLVSEDNMLTRLTDSIETAFGLSN----ICEVQTFKGD 243 Query: 244 ELLFSANFACPICGY-SMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPELSL 302 FS N ACP + + ++EPR FSFN+P GACP CDG+G + + ++ + +LS+ Sbjct: 244 VFRFSINSACPNLHFLNFDKIEPRTFSFNSPVGACPDCDGIGTVRSVNMTTLVPDTQLSV 303 Query: 303 AGGAIRGWDRR--NFYYFQMLKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKENIEFKY 360 A+ D++ + + + + +LA + KF + PW L+ V +L+ F Sbjct: 304 EKIALDLIDKKIVSKNFMREMSALARNLKFTLNTPWSDLTDYVQNTILHAK-----NFLL 358 Query: 361 MNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGTRLRREARH 420 N R +R + G++ +ER E + L+ ++ N PC SC G RLR + Sbjct: 359 HNTR----VRY--YTGLVRKIERDVSENSGGS----LSGYLYNSPCRSCSGKRLRASSLC 408 Query: 421 VYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTL 480 V V N + + DM + + FF L + + KI+ IL+EI RL+FL+ +GL YLTL Sbjct: 409 VKVSNKNIIDVCDMPLDGILHFFKALDIPRKFEKISSPILREIISRLEFLIELGLGYLTL 468 Query: 481 SRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNT 540 SRS T+SGGE+QRIRLA+QIG+GL V+YVLDEPSIGLH+RDNE+L+ L++LR+ GNT Sbjct: 469 SRSITTISGGESQRIRLATQIGSGLTEVLYVLDEPSIGLHKRDNEKLIKLLLNLRNRGNT 528 Query: 541 VIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEV 600 +IVVEHDE+ IR++D ++DIGPGAG GG+VV GP+ + + SLTG+Y+SG+ + Sbjct: 529 LIVVEHDEETIRSSDWIVDIGPGAGRMGGQVVYSGPVGKMPS--RSLTGKYLSGELMVST 586 Query: 601 PKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQR 660 PKKR ++ + L+GA+ NNLK++T+ P+ F ITGVSGSGKSTL+N L Sbjct: 587 PKKRRVSSCG--ITLSGAKENNLKNITVFFPLKTFIVITGVSGSGKSTLVNSVLCKALSN 644 Query: 661 QLNGATIAEP--------------------------APYRDIQGLEHFDKVIDIDQSPIG 694 G T +E AP D G E+ KV+ IDQ PIG Sbjct: 645 ICKGNTPSENNCQDADCTDACTVRNGMQHNEQTVRLAPALD--GAENISKVVHIDQKPIG 702 Query: 695 RTPRSNPATYTGVFTPVRELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMH 754 RTPRSN ATYTGVF +R++F+ P +RARGY+PGRFSFN++GGRCE C+GDG IK+EM+ Sbjct: 703 RTPRSNLATYTGVFDKIRDIFSKTPTARARGYSPGRFSFNLKGGRCEKCKGDGCIKIEMN 762 Query: 755 FLPDIYVPCDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLM 814 FLPD+YV C+ C G RYNR+TL++ Y +IH+VL M + EA EFF A+P++ + L+ + Sbjct: 763 FLPDVYVDCEDCNGMRYNRDTLQVLYNNMSIHDVLTMPVCEAVEFFRAIPSIHQPLKLMD 822 Query: 815 DVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDV 874 ++GL Y+ LGQ A TLSGGEAQR+KLA +L KR LY+LDEPTTGLHF D++QLL++ Sbjct: 823 EIGLGYMTLGQPAPTLSGGEAQRIKLAAQLQKRTAQDVLYVLDEPTTGLHFHDVRQLLEI 882 Query: 875 LHKLRDQGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTAR 934 LH+L D GNT++VIEHNLDVIKTAD ++D+GPEGG+ GG ++ GTPE VA S T Sbjct: 883 LHRLVDNGNTVIVIEHNLDVIKTADHVIDMGPEGGNAGGSVVACGTPEEVALHPDSATGY 942 Query: 935 FLKPML 940 FLK L Sbjct: 943 FLKKCL 948 >UniRef50_Q30YG3 Excinuclease ABC subunit A n=3 Tax=Bacteria RepID=Q30YG3_DESDG Length = 926 Score = 914 bits (2361), Expect = 0.0, Method: Compositional matrix adjust. Identities = 473/937 (50%), Positives = 634/937 (67%), Gaps = 30/937 (3%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 63 I + GAR HNLKN+ L IPRD+L+VV G SGSGKS+LAFD +YAEGQRRYVESLSAYARQ Sbjct: 6 IHIEGARQHNLKNLTLDIPRDELVVVCGPSGSGKSTLAFDLVYAEGQRRYVESLSAYARQ 65 Query: 64 FLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCPDH 123 FL M+KPDVD IEGLSPAIS+EQ+STS NPRSTVGT+TE++D+LR+ +AR+G CP Sbjct: 66 FLPQMDKPDVDKIEGLSPAISLEQQSTSRNPRSTVGTVTEVYDFLRVFYARLGMMYCPKC 125 Query: 124 DVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARIDGEV 183 P+AA+ +++ ++LS +G + M++AP+++ +KG H L+ L +QG++R R++GEV Sbjct: 126 GKPIAARAADEIIADILSMEQGTKFMVMAPLVEHQKGTHADRLKRLKAQGFVRIRLNGEV 185 Query: 184 CDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVADMDDPKAE 243 L + P LE KKH+I++VVDR ++D + RLA+S E AL G +V+ P Sbjct: 186 MTLDEVPALEKNKKHSIDLVVDRLVLKDGIRGRLADSVELALRFGEGRLIVSI---PGGA 242 Query: 244 ELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPELSLA 303 E + S CP C S+ L P+LFSFN+P GACP C G+G YF+P+ + N LSL Sbjct: 243 EQVHSTESVCPTCKLSLPPLSPQLFSFNSPQGACPRCSGIGSIDYFEPNLLAPNKGLSLV 302 Query: 304 GGAIRGWDRRNFY--YFQMLKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKENIEFKYM 361 G + W + Y L++L F + P+ S + +G + Sbjct: 303 SGGLLPWKNPKVFERYKPALEALGKELGFAADTPFREYSEKAWNALFHGEKETG------ 356 Query: 362 NDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGTRLRREARHV 421 + GV+ +ER + S R+EL+++ + PC +C+G RL+ EA V Sbjct: 357 ------------WPGVVLLLERGMQL--GSQWRDELSRYRQSHPCPACDGARLKPEALAV 402 Query: 422 YVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTLS 481 V++ + +SI A+E+ +A IAE +LKE+ RL F+ NVGL+Y++L Sbjct: 403 RVDDLNISQFCSLSITRALEWLRGRDFRQSQAVIAEPLLKELTHRLGFMENVGLDYISLG 462 Query: 482 RSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTV 541 R+ TLSGGEAQRIRLASQ+G+GLVGV YVLDEPSIGLH +DNERL+ TL L+ GNTV Sbjct: 463 RNMSTLSGGEAQRIRLASQLGSGLVGVTYVLDEPSIGLHPKDNERLIRTLRSLQKRGNTV 522 Query: 542 IVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEVP 601 +VVEHDE I AD V+++GPG+G+ GGE+V G ++++++ +SLT +Y+ G+ I +P Sbjct: 523 LVVEHDEATILEADTVVELGPGSGMLGGEIVFNGSVKSLLSDSDSLTARYLRGEMTIPLP 582 Query: 602 KKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFP-IAQR 660 +KR + VL+ G NNL+D+ +P+G TC+TG SGSGKS+L+ D+L+ IA Sbjct: 583 EKRRQGSGSIVLR--GVTTNNLQDIDCEIPLGALTCVTGPSGSGKSSLVVDSLYKHIALH 640 Query: 661 QLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPE 720 Q + P R I GLE+ ++++ IDQ+PIGRTPRSNPATYT +F +R +FA P+ Sbjct: 641 Q--SIKVDSPGQIRGIDGLENIERLVAIDQTPIGRTPRSNPATYTKIFDEIRNIFAMTPD 698 Query: 721 SRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKY 780 +R RGY PGRFSFNVRGGRCEAC GDG I+VEMHFLPDIYV CD C GKRYN ETLE++Y Sbjct: 699 ARKRGYKPGRFSFNVRGGRCEACGGDGQIRVEMHFLPDIYVTCDVCGGKRYNHETLEVRY 758 Query: 781 KGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKL 840 KG I +VL MT+ +A+ FF+ PAL R+L L DVGL Y+RLGQ ATTLSGGEAQR+K+ Sbjct: 759 KGMNIADVLGMTVRQAKAFFENYPALERRLAVLEDVGLEYLRLGQPATTLSGGEAQRIKI 818 Query: 841 ARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADW 900 +REL KR TLYILDEPTTGLH ++ +L+ VLH+L D+G T+VVIEHN DVI AD Sbjct: 819 SRELGKRSLPGTLYILDEPTTGLHMHEVGKLIRVLHQLVDRGATVVVIEHNTDVIMAADT 878 Query: 901 IVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLK 937 ++DLGP GG GG I+ SGTPE + AS T FLK Sbjct: 879 VIDLGPGGGEYGGRIVSSGTPEEIMADPASVTGSFLK 915 >UniRef50_Q2NJE0 Excinuclease ABC subunit A n=3 Tax=Candidatus Phytoplasma RepID=Q2NJE0_AYWBP Length = 972 Score = 909 bits (2349), Expect = 0.0, Method: Compositional matrix adjust. Identities = 463/962 (48%), Positives = 637/962 (66%), Gaps = 27/962 (2%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 63 I+VRGAR +NLKNIN+ IP++KL+++TGLSGSGKSSLAFDTLY EG+RRYVESLSAYARQ Sbjct: 9 IKVRGARQNNLKNINIDIPKNKLVIITGLSGSGKSSLAFDTLYQEGKRRYVESLSAYARQ 68 Query: 64 FLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCPDH 123 FL EKP+VD IEGLSP+IS++QK+TS+NPRSTVGTITEI+DYLRL++A + P P+ Sbjct: 69 FLGSFEKPNVDSIEGLSPSISVDQKTTSNNPRSTVGTITEIYDYLRLIYANIAFPFHPEK 128 Query: 124 DVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARIDGEV 183 ++ L QT+ QM++ + +++LAPII+ +KG H KTLE LA G+ R I+ + Sbjct: 129 NIVLEKQTIEQMINKTNQTFPKQLVLILAPIIERKKGTHQKTLEALAKDGFNRVIINDII 188 Query: 184 CDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVADM------ 237 + D P L + H I VV+DRF+V D RL E+ E AL L+ G + D Sbjct: 189 YLMDDIPSLTKNQYHNIYVVIDRFEVNSDNQTRLFEALEQALNLAQGKVFIMDYKSKNSN 248 Query: 238 ----DDPKAEE---LLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFD 290 DD K ++ L + N+ + + E RLFSFN P GAC C G+G D Sbjct: 249 DSNKDDNKNKKCQILKLNCNYHLEGINFDIPLRESRLFSFNTPLGACQICKGIGKTAEID 308 Query: 291 PDRVIQNPELSLAGGAIRGWDRRNFYYF-----QMLKSLADHYKFDVEAPWGSLSANVHK 345 D ++ + E L AI + N Y Q LK++ +HY+ D+ P + Sbjct: 309 CDMIL-DYEKPLNKDAILIFKSNNEYNNFASKEQELKAVCNHYQIDMTVPLKKIDPQKLN 367 Query: 346 VVLYGSGKE-----NIEF-KYMNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAK 399 ++LYGS + + F ++ + +++ FEG+ ++RR++ET S +++ L+ Sbjct: 368 IILYGSPDQIPLTPPLCFSRFSKNTTTKTLKCDFFEGIASMLKRRFEETTSEWLKKWLSN 427 Query: 400 FISNRPCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKI 459 ++ + C C+G RL + A + N + I+D+SI + FF NL+L+ + KI Sbjct: 428 YMMEKKCKKCQGQRLNQGALLFKINNKNIYEITDLSIEQTLAFFQNLELSKKDTKIINLA 487 Query: 460 LKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGL 519 LKE+ +RL FL +GL YL+LSRS TLSGGE+QRIRLA+QIG+ L GV+YVLDEPSIGL Sbjct: 488 LKEVINRLTFLKEIGLGYLSLSRSVTTLSGGESQRIRLATQIGSQLSGVLYVLDEPSIGL 547 Query: 520 HQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEA 579 HQ+DN+ L+ +L +RDLGN++IVVEHD D + A+D++IDIGP AG+ GG+V A G + Sbjct: 548 HQKDNDLLIKSLKKMRDLGNSLIVVEHDHDTMLASDYLIDIGPQAGIFGGKVQAFGTPQE 607 Query: 580 IMAVPESLTGQYMSGKRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCIT 639 +M SLTG+Y+S K +I+VPK R N + +L +T A NNLK + + P+ +T Sbjct: 608 VMKNKNSLTGKYLSKKIQIKVPKIRRKGNKDHIL-VTKASKNNLKSINVCFPMQQLIVVT 666 Query: 640 GVSGSGKSTLINDTLFPIAQRQLNGATIAEPAPYRD-IQGLEHFDKVIDIDQSPIGRTPR 698 GVSGSGKSTL+ND L Q++ + + + + K+++I Q PIG+TPR Sbjct: 667 GVSGSGKSTLVNDVLLDCLQKKYSKKNKNQQKDFSHLVNDFNKVKKIVEISQDPIGKTPR 726 Query: 699 SNPATYTGVFTPVRELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPD 758 SNP TYTGVF +REL++ E++ +GY GRFSFNV+GGRCE C GDGV K+ MHFLPD Sbjct: 727 SNPLTYTGVFDEIRELYSKTKEAQMKGYQKGRFSFNVKGGRCEVCSGDGVKKISMHFLPD 786 Query: 759 IYVPCDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGL 818 +YV C+ CKG RY +ETL IKYK K I ++L M++EE FF P + +L+ L +VGL Sbjct: 787 VYVMCEACKGTRYQKETLSIKYKDKNIADILAMSVEEGVLFFQNHPKIKHQLEILQNVGL 846 Query: 819 TYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKL 878 YI+LGQS+ TLSGGEAQRVKLA EL K+ LYILDEPTTGLH D++QLL VLH++ Sbjct: 847 GYIKLGQSSPTLSGGEAQRVKLASELHKKVIPGALYILDEPTTGLHSEDVRQLLKVLHQM 906 Query: 879 RDQGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLKP 938 D+ TIVVIEHNLDVIK AD+I+DLGPEGG+ GG ++ +GTPE V++ E S+T ++LK Sbjct: 907 TDKKATIVVIEHNLDVIKNADYIIDLGPEGGACGGYVVATGTPEQVSQNEKSYTGKYLKK 966 Query: 939 ML 940 +L Sbjct: 967 IL 968 Score = 65.5 bits (158), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 41/118 (34%), Positives = 60/118 (50%), Gaps = 5/118 (4%) Query: 2 DKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYA 61 D I V A +NLK+IN+ P +LIVVTG+SGSGKS+L D L Q++Y + Sbjct: 638 DHILVTKASKNNLKSINVCFPMQQLIVVTGVSGSGKSTLVNDVLLDCLQKKYSKKNKNQQ 697 Query: 62 RQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPR 119 + F L V+ + + I Q PRS T T + D +R L+++ E + Sbjct: 698 KDFSHL-----VNDFNKVKKIVEISQDPIGKTPRSNPLTYTGVFDEIRELYSKTKEAQ 750 Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 36/117 (30%), Positives = 60/117 (51%), Gaps = 6/117 (5%) Query: 608 NPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATI 667 N + +K+ GAR NNLK++ + +P ITG+SGSGKS+L DTL+ +R+ + Sbjct: 4 NKNQFIKVRGARQNNLKNINIDIPKNKLVIITGLSGSGKSSLAFDTLYQEGKRRYVESLS 63 Query: 668 AEPAPYR------DIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGV 718 A + ++ +E I +DQ PRS T T ++ +R ++A + Sbjct: 64 AYARQFLGSFEKPNVDSIEGLSPSISVDQKTTSNNPRSTVGTITEIYDYLRLIYANI 120 >UniRef50_Q1MP46 Excinuclease ABC, A subunit n=2 Tax=Bacteria RepID=Q1MP46_LAWIP Length = 957 Score = 906 bits (2342), Expect = 0.0, Method: Compositional matrix adjust. Identities = 458/944 (48%), Positives = 634/944 (67%), Gaps = 13/944 (1%) Query: 1 MDK-IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSA 59 M+K I + GAR HNLKNI + IPR+KL+V+ G SGSGKS+LAFD +YAEGQRRY+ESLS Sbjct: 1 MNKCIHIEGARQHNLKNITIDIPREKLVVICGPSGSGKSTLAFDIVYAEGQRRYIESLST 60 Query: 60 YARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPR 119 YARQFL M+KPD+D IEGLSPAIS+EQ++T NPRSTVGT TEI+D+LR+ +AR+G+ Sbjct: 61 YARQFLPQMDKPDIDKIEGLSPAISLEQQTTGRNPRSTVGTTTEIYDFLRVFYARLGKMY 120 Query: 120 CPDHDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARI 179 C P+ A++V +++ ++L+ PEG +++LL+P+++ +KG H + L+ L + G++R RI Sbjct: 121 CTGCSKPIEARSVDEIIADILALPEGTKIILLSPLVELQKGTHIEKLKKLKADGFVRVRI 180 Query: 180 DGEVCDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVADM-- 237 DG + + + P L+ KKHTIE+VVDR +++D+ RLA+S E AL GG ++ ++ Sbjct: 181 DGILYTIDEAPSLDKNKKHTIELVVDRLIIKNDIRGRLADSVELALRYGGGHVIIHEISI 240 Query: 238 -DDPKAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQ 296 D+ K + + + C C S L P+ FSFN+P GACP C GLG +YF+P + Sbjct: 241 SDEKKGIDTIHATESVCTSCRISFPTLTPQFFSFNSPQGACPRCSGLGTIEYFEPLLIAP 300 Query: 297 NPELSLAGGAIRGWDRRNFY--YFQMLKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKE 354 N LSL AI W + Y LK L Y F++ P +A ++ YG Sbjct: 301 NRGLSLNTKAILPWANPKIFHRYESSLKELGRKYGFNLSTPLSEFNAEALDILFYGEQIN 360 Query: 355 NIEFKYMNDRGDT--SIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGT 412 + + + +I + G++ +E+ + + R+ L++++ N C C G Sbjct: 361 DTPSQLSKSKKTVQKTIDNQRWSGIIPILEQSLQYGD--MWRDILSRYLQNMDCPVCHGA 418 Query: 413 RLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDRLKFLVN 472 RLR EA V ++ + + + + + + + +G+ A IAE +LKE+ RLKF++N Sbjct: 419 RLRTEALAVQIQGVSIQELCTIPVSKTLNWLQQVIFSGRHAIIAEPLLKELIHRLKFMIN 478 Query: 473 VGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLI 532 VGL+YL+L R+ TLSGGEAQRIRLASQ+G+GLVGV YVLDEPSIGLH RDNERL+ TL Sbjct: 479 VGLDYLSLGRTMTTLSGGEAQRIRLASQLGSGLVGVTYVLDEPSIGLHPRDNERLVSTLR 538 Query: 533 HLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYM 592 L+ GNTV+VVEHDE IR +D +I++GPG+G+HGGE V +G ++ +LT +YM Sbjct: 539 SLQKRGNTVLVVEHDEATIRESDMIIELGPGSGLHGGEKVFQGSFRQLINESNTLTAKYM 598 Query: 593 SGKRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLIND 652 G I +P KR P+ L L G +NLK++T + P+G TC+TGVSGSGKS+L+ D Sbjct: 599 RGDLTIPIPDKR--RQPKNYLTLQGITTHNLKNITCSFPLGTLTCVTGVSGSGKSSLVVD 656 Query: 653 TLFPIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVR 712 TL+ +G + +P IQG+E ++ I IDQ+PIG+TPRSNPATYT +F +R Sbjct: 657 TLYKHLALA-HGIRVDQPGIIHGIQGIEKVERTISIDQTPIGKTPRSNPATYTKIFDEIR 715 Query: 713 ELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYN 772 +FA P+++ RGY PGRFSFNV GGRCE C+GDG ++VEMHFLPDIYV CD C GKRYN Sbjct: 716 NIFAMTPDAKKRGYQPGRFSFNVPGGRCETCKGDGQLRVEMHFLPDIYVTCDICNGKRYN 775 Query: 773 RETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSG 832 ETLE++Y+G I EVL + + EAR+FF P L RKL L +VGL Y++LGQ ATTLSG Sbjct: 776 HETLEVRYRGLNISEVLGLAVHEARKFFTNYPILERKLAILEEVGLDYLQLGQPATTLSG 835 Query: 833 GEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNL 892 GEAQR+K++REL KR TLYILDEPTTGLH ++ +L+ VL +L D+ T+VVIEHN Sbjct: 836 GEAQRIKISRELGKRSLPGTLYILDEPTTGLHMHEVGKLITVLQQLVDKKATVVVIEHNK 895 Query: 893 DVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFL 936 DVI +D+++DLGP GG GG I+ SGTPE + + S T +FL Sbjct: 896 DVILASDYVIDLGPGGGENGGHIVASGTPEEIMQDPQSITGKFL 939 Score = 117 bits (294), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 64/189 (33%), Positives = 107/189 (56%), Gaps = 15/189 (7%) Query: 763 CDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAV--------------PALAR 808 C C G R E L ++ +G +I E+ + + + + V L Sbjct: 412 CPVCHGARLRTEALAVQIQGVSIQELCTIPVSKTLNWLQQVIFSGRHAIIAEPLLKELIH 471 Query: 809 KLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADI 868 +L+ +++VGL Y+ LG++ TTLSGGEAQR++LA +L G T Y+LDEP+ GLH D Sbjct: 472 RLKFMINVGLDYLSLGRTMTTLSGGEAQRIRLASQLGSGLVGVT-YVLDEPSIGLHPRDN 530 Query: 869 QQLLDVLHKLRDQGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECE 928 ++L+ L L+ +GNT++V+EH+ I+ +D I++LGP G GGE + G+ + Sbjct: 531 ERLVSTLRSLQKRGNTVLVVEHDEATIRESDMIIELGPGSGLHGGEKVFQGSFRQLINES 590 Query: 929 ASHTARFLK 937 + TA++++ Sbjct: 591 NTLTAKYMR 599 >UniRef50_B6YRR0 Excinuclease ABC subunit A n=1 Tax=Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 RepID=B6YRR0_AZOPC Length = 943 Score = 900 bits (2325), Expect = 0.0, Method: Compositional matrix adjust. Identities = 447/937 (47%), Positives = 633/937 (67%), Gaps = 10/937 (1%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 63 I+++GAR HNLKNIN+ IPR+ V+TGLSGSGKSSLAFDTL+ EGQRRY+++ S YAR Sbjct: 10 IDIQGARVHNLKNINVTIPRNSFTVITGLSGSGKSSLAFDTLFVEGQRRYIDTFSVYARS 69 Query: 64 FLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCPDH 123 FL +E+PDVD I GLSP ISIEQK+T+ +PRSTVGT+TEI+DYLRLLFARVGE Sbjct: 70 FLHNVERPDVDRITGLSPVISIEQKTTNRSPRSTVGTMTEIYDYLRLLFARVGEAYSYIS 129 Query: 124 DVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARIDGEV 183 + T +++ ++S+ GK++ LL+PI+K RKG + + E A +G++ RIDG++ Sbjct: 130 GEKMVKYTEEHILELIISRYNGKKVYLLSPIVKNRKGHYRELFEQFAKRGFLNVRIDGKL 189 Query: 184 CDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVADMDDPKAE 243 ++ +L+ K H++EVV+D+ + D +R+ +S TA+ S G +V +++ Sbjct: 190 KEIIPALRLDRYKYHSVEVVIDKLLITDKDKKRIKKSVYTAMNYSDGLLMVLELESGNVS 249 Query: 244 ELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPELSLA 303 FS + CP G S + P FSFN+P GAC C G G D + ++ +PELS+ Sbjct: 250 --YFSRHLMCPSTGLSYNDPAPHNFSFNSPHGACSKCKGTGQINEIDKNLIMPHPELSIY 307 Query: 304 GGAIRGWDR-RNFYYFQMLKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKENIEFKYMN 362 G I + R F L+ Y D+ S ++ G E I Sbjct: 308 QGGIAPLGKYREILIFNQLEITLKKYGIDLHTSLKDFSEEAINDIMNGV-TEQISIHSDA 366 Query: 363 DRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGTRLRREARHVY 422 +++ FEG+ + + ++ S + + KFI+ C C G RL +EA H Sbjct: 367 AYSNSNHCLSSFEGIYKYILIQKEQGSSRSATQWATKFITTAICPECNGQRLNKEALHYR 426 Query: 423 VENTPLPAISDMSIGHAMEFFNN--LKLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTL 480 + + ++ + I + N L L + +IA +ILKEI R +FL+N+GLNYLTL Sbjct: 427 INGKNIADLTSLEIPELFNWINTTELCLNKYQKQIAIEILKEIRTRTQFLLNIGLNYLTL 486 Query: 481 SRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNT 540 +RS+ +LSGGE QRIRLA+QIG+ LV V+Y+LDEPSIGLHQRDN RL+G L LRD+GN+ Sbjct: 487 NRSSASLSGGEGQRIRLATQIGSQLVNVLYILDEPSIGLHQRDNIRLIGALKQLRDIGNS 546 Query: 541 VIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEV 600 VIVVEHD++ I AD+++++GP AG GGE+V G E ++ +LT Y+S K+ I + Sbjct: 547 VIVVEHDKEMIMNADYIVELGPKAGKLGGEIVFTGTPEELLK-KNTLTASYISEKKNILI 605 Query: 601 PKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQR 660 KKR N + + L GA GNNLK+V + P+G F CITGVSGSGKSTLIN+TL PI + Sbjct: 606 SKKR-KGNKKNIF-LKGASGNNLKNVDIIFPLGKFICITGVSGSGKSTLINETLQPIISQ 663 Query: 661 QLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPE 720 +L + + EP PY+ I+G+E+ DK++++DQSPIGRT RSNPATY G+F+ +R LF + E Sbjct: 664 KLYNS-LKEPLPYQSIEGIENLDKIVNVDQSPIGRTFRSNPATYIGIFSEIRNLFTELTE 722 Query: 721 SRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKY 780 S+ +GY PG FSFN++GGRCE C+G+G +EM+FLP++YVPC+QC+GKRYN+ L I Y Sbjct: 723 SKIKGYKPGHFSFNIKGGRCEVCKGNGYKTIEMNFLPNVYVPCEQCQGKRYNQAILGILY 782 Query: 781 KGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKL 840 KGK+I +VL+MTI +A EFF P++ K++ L +VGL YI LGQ +TTLSGGE+QR+KL Sbjct: 783 KGKSIADVLNMTINQAIEFFKYFPSINNKIKVLQEVGLGYICLGQPSTTLSGGESQRIKL 842 Query: 841 ARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADW 900 A ELSK+ TG+TLYILDEPTTGLHF DI+ LL+V+++L ++ NT+++IEHN++VIK+AD+ Sbjct: 843 ATELSKQDTGKTLYILDEPTTGLHFEDIRVLLEVINRLVNRKNTVIIIEHNMEVIKSADY 902 Query: 901 IVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLK 937 ++D+GPEGG GGEIL +GTPE + + + +T+ F + Sbjct: 903 VIDMGPEGGRDGGEILFAGTPEQLIQSKKGYTSHFFR 939 >UniRef50_C0QY85 Exinuclease ABC subunit A n=6 Tax=Bacteria RepID=C0QY85_BRAHW Length = 1938 Score = 897 bits (2317), Expect = 0.0, Method: Compositional matrix adjust. Identities = 464/979 (47%), Positives = 634/979 (64%), Gaps = 49/979 (5%) Query: 2 DKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYA 61 + IE+RGA+ HNLKN++L IP L +TG+SGSGKSSLAFDT++ EGQRRY+ESLSAYA Sbjct: 4 NSIEIRGAKEHNLKNVSLSIPHKTLTTLTGVSGSGKSSLAFDTIFKEGQRRYLESLSAYA 63 Query: 62 RQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCP 121 RQFL +M K DV+HIEGLSP ISI+QKS + NPRSTVGT+TEI+D+ RLLFAR+G P C Sbjct: 64 RQFLGVMAKADVEHIEGLSPTISIDQKSVNKNPRSTVGTVTEIYDFFRLLFARLGVPYCS 123 Query: 122 DHDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARIDG 181 ++ Q+ Q+ +VL + KR+++LAPI+++RKGE+ K +E + GY R RID Sbjct: 124 KCGHKISKQSEDQIAQSVLREFAEKRILVLAPIVRDRKGEYRKEIEEVKLAGYPRIRIDN 183 Query: 182 EV--CDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVADMDD 239 V D + P+L+ +KHT+E+V+DR KV D R+ + E A+ ++ G + + Sbjct: 184 IVYKFDEDEIPELKRYEKHTLEIVIDRIKVEDKYLSRITDDIERAIRITKGLVAFYE-EH 242 Query: 240 PKAEELL---------------------------------FSANFACPICGYSMRELEPR 266 K+EE+L ++ +C CG+S+ ++EP Sbjct: 243 EKSEEVLETQTPESTEEDTKTKKKKIKMSKQFEIDKYYKLYTTERSCANCGHSIADIEPN 302 Query: 267 LFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPELSLAGGAIRGW--DRRNF---YYFQML 321 LFSFNNP GAC C GLGV+ F ++++ L++ GA+ + D F Y L Sbjct: 303 LFSFNNPMGACTVCGGLGVEHVFTEKHILKDENLNIYEGALSCFVDDHIGFDMEYGTDEL 362 Query: 322 KSLADHYKFDVEAPWGSLSANVHKVVLYGSGKENIEFKYMNDRGDTSIRRHPFEGVLHNM 381 + +A YK D++ PW L+ K +LYG+ KE K R P G+L + Sbjct: 363 EVIAKTYKIDLKKPWKDLTKTEKKYLLYGTDKEVKWRKRFWYHSKLVEERVP--GILDRL 420 Query: 382 ERRYKETESSAVREELAKFISNRPCASCEGTRLRREARHVYVENTPLPAISDMSIGHAME 441 + Y+ ++S A F+ C C+G R+ +A V + S M+I + Sbjct: 421 KYDYETYKNSY----YANFMDEVQCPKCKGKRINEDALSVKFNGKTISDFSSMTIEDLYD 476 Query: 442 FFNNLKLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQI 501 +F LKL I I+KEI RL FLV VGL YLT+ RS+ TLSGGE+QRIRLASQI Sbjct: 477 YFTKLKLKPNEEVIGAPIVKEIIYRLTFLVKVGLTYLTIERSSPTLSGGESQRIRLASQI 536 Query: 502 GAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIG 561 G+GL GV+YVLDEPSIGLHQ DN++L+ +L LRD NTVIVVEHD++ + +D++IDIG Sbjct: 537 GSGLEGVLYVLDEPSIGLHQSDNKKLIESLKTLRDKNNTVIVVEHDKETMEESDYLIDIG 596 Query: 562 PGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEVPKKRVPANPEKVLKLTGARGN 621 P AGV+GGEVV G E + S T +Y+ G IE+PK+R N K LK+ GA Sbjct: 597 PNAGVNGGEVVGIGDYEEFIKSDRSYTAKYLRGDDDIEIPKQRREGNG-KFLKVIGANQF 655 Query: 622 NLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAEPAPYRDIQGLEH 681 NLK++ + P+G+F +TG+SGSGKSTL+ + L G T+ P + I+GLE+ Sbjct: 656 NLKNIDVQFPLGVFIVVTGLSGSGKSTLVENILMRALHNHFYGKTLT-PGSHERIEGLEN 714 Query: 682 FDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESRARGYTPGRFSFNVRGGRCE 741 DKVI++DQSPIGRTPRSNPATYT V +P+R+LFA ++ RGY GRFSFNV+ GRC Sbjct: 715 IDKVIEVDQSPIGRTPRSNPATYTKVLSPIRDLFAATKLAKMRGYDKGRFSFNVKTGRCP 774 Query: 742 ACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFD 801 C+G GVI++EM FL ++ VPC++C GKR+N ETL++KYK KTI++VL+M++ EA FFD Sbjct: 775 TCEGAGVIELEMQFLSNVLVPCEECGGKRFNAETLDVKYKDKTIYDVLEMSVSEAIAFFD 834 Query: 802 AVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTT 861 + ++ R L+ + D+GL YI+LGQ +TTLSGGEAQR+KLA EL K TG TLYILDEPTT Sbjct: 835 GITSITRILKIMEDIGLGYIKLGQPSTTLSGGEAQRIKLASELHKISTGNTLYILDEPTT 894 Query: 862 GLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTP 921 GLHF DI++LL L L ++GNT++V+EHNLDVIK AD I+D+GP G GG ++ G P Sbjct: 895 GLHFEDIKKLLKALDGLVEKGNTVLVVEHNLDVIKCADHIIDMGPLSGDKGGRVVAEGKP 954 Query: 922 ETVAECEASHTARFLKPML 940 E + + + S TA+ LK +L Sbjct: 955 EDIIKVKESLTAKELKEIL 973 Score = 694 bits (1792), Expect = 0.0, Method: Compositional matrix adjust. Identities = 390/970 (40%), Positives = 570/970 (58%), Gaps = 68/970 (7%) Query: 6 VRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQFL 65 ++GA HNLKNI+L +P++++ V+TG+SGSGK+SLAFDT++ EGQRR+VESLS YAR+FL Sbjct: 998 IKGANKHNLKNISLTLPKNQINVITGVSGSGKTSLAFDTIFKEGQRRFVESLSTYARRFL 1057 Query: 66 SLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCP---D 122 E +V+ IEGL+PAI+I+QK+ S NPRSTV T+TEI+DY RL+FAR+ +P CP D Sbjct: 1058 GRFEDANVEKIEGLAPAIAIDQKNVSRNPRSTVATVTEIYDYFRLIFARLAKPHCPHCND 1117 Query: 123 HDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEH-----------TKTLENLAS 171 D L A+T S + ++ + +L++++P+ K +E Sbjct: 1118 KDT-LKAETPSILATEIIDTMDLHKLVIISPLYHSSFNHRFTFDDNDAKDIKKIIEKTRE 1176 Query: 172 QGYIRARIDGE---VCDLSDPPKLELQKK--HTIEVVVDRFKVRDDLTQRLAESFETALE 226 GY+R +I+ + D+++ EL K+ +++ +V+DR V D R+A++ + A++ Sbjct: 1177 AGYVRMQINNNDYVIDDITEDDIKELSKEEIYSVGIVIDRIVVGKDKRARIADAIDRAMD 1236 Query: 227 LSGGTAVVADMDDPKAEELLFSANFACPICGYSMR-ELEPRLFSFNNPAGACPTCDGLGV 285 LS G A + +E + AC + G E+ PR FSFN+ G C C GLG Sbjct: 1237 LSNGIAHIKASHGIIIKESFHTKFPACLLHGILFDFEVTPRHFSFNSHWGYCEECKGLGS 1296 Query: 286 QQYFDPDRVIQNPELSLAGGAIRGWDRRNFYYFQMLKSLADHY--------------KFD 331 + F D I++ L GA+ + M + HY K D Sbjct: 1297 KPTFSIDLAIKDSTKPLFDGAL------DTAIHNMFSTPGKHYTDSLMRFLRRNGITKKD 1350 Query: 332 V-EAPWGSLSANVHKVVLYGSGKENIEFKYMNDRGDTSIRRHPFEGVLHNMERRYKETES 390 + + P+ L V +G GD S+ H+ E S Sbjct: 1351 LYDTPFNELDQKVIDTFFFG--------------GDYSVGN--IITAWHSNNDVTSEDYS 1394 Query: 391 SAVREELAKFISNRPCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLK--L 448 + L KF + C SC G RL R ++N + + M++ A+ F+ L L Sbjct: 1395 EWKDKSLGKFFIDEECDSCHGERLNEIIRSYTIQNKNISQVCAMTVEEAIHLFDELPNLL 1454 Query: 449 AGQRAKIAEKILKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGV 508 + + I+++ +KEI RL FL VGL YL LSR TLSGGEAQRIRLASQ+G+ L GV Sbjct: 1455 SERENTISKEAIKEIRTRLSFLDKVGLGYLFLSRKYATLSGGEAQRIRLASQLGSKLTGV 1514 Query: 509 MYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHG 568 +YVLDEP++GLH RD LL TL LRDL NT+++VEHD D ++AAD+++D+GP AG G Sbjct: 1515 LYVLDEPTVGLHPRDTNHLLDTLKELRDLKNTLVIVEHDRDTMKAADNIVDMGPYAGAFG 1574 Query: 569 GEVVAEGPLEAIMAVPESLTGQYMSGKRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTL 628 GEVV +G + I+ SLTG Y+S ++K+ K V + +KL NNLK++ + Sbjct: 1575 GEVVFQGKYDDILKDDNSLTGNYLSERKKV-FEKTAVRNEETECIKLKNVSTNNLKNIDV 1633 Query: 629 TLPVGLFTCITGVSGSGKSTLINDTLFP-IAQRQLNGATIAEPAPYRDIQGLEHFDKVID 687 +P+ +TGVSGSGKS+LI DTL+P + +R+LN + E I I Sbjct: 1634 DIPLKKIVVVTGVSGSGKSSLIIDTLYPALKKRRLNQYSKFESVEIPSI-----VSDTIL 1688 Query: 688 IDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDG 747 +DQ I + RS +Y+ VF +R +FA P ++A+ + PGRFS+N + GRC C+G G Sbjct: 1689 VDQISIVGSIRSTLVSYSKVFDKIRNIFAKTPTAKAKAFAPGRFSYNGKEGRCNICEGKG 1748 Query: 748 VIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALA 807 + K+ MHFL D+ + C+ C GKRYN ETL +++K I EVL++T++EA EFFD ++ Sbjct: 1749 IRKIAMHFLSDMEIVCEACGGKRYNDETLSVRFKSLNIAEVLELTVDEAIEFFDFDKSVT 1808 Query: 808 RKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKR-GTGQTLYILDEPTTGLHFA 866 + L + +VGL YI+L Q T SGGE QR+KLA EL+K+ G +YILDEPTTGLHF Sbjct: 1809 KTLSIMSEVGLGYIKLSQRLDTFSGGELQRLKLATELAKKQGDEHIVYILDEPTTGLHFD 1868 Query: 867 DIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAE 926 D+ +LL L+KL ++G+++++IEHN DVIK AD+I+DLG EGGS GGEI+ GT E + E Sbjct: 1869 DVNKLLIALNKLVEKGHSVIIIEHNPDVIKAADYIIDLGLEGGSNGGEIIAKGTVEEILE 1928 Query: 927 CEASHTARFL 936 + +T +++ Sbjct: 1929 MKKGYTWKYI 1938 Score = 204 bits (518), Expect = 2e-50, Method: Compositional matrix adjust. Identities = 133/346 (38%), Positives = 188/346 (54%), Gaps = 35/346 (10%) Query: 389 ESSAVREELAKFISNR--PCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNL 446 E + V E +F+SN PC C G R E V ++ + + +MS+ A+ FF+ + Sbjct: 777 EGAGVIELEMQFLSNVLVPCEECGGKRFNAETLDVKYKDKTIYDVLEMSVSEAIAFFDGI 836 Query: 447 KLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLV 506 I LK + ++GL Y+ L + + TLSGGEAQRI+LAS++ Sbjct: 837 T--------------SITRILKIMEDIGLGYIKLGQPSTTLSGGEAQRIKLASELHKIST 882 Query: 507 G-VMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAG 565 G +Y+LDEP+ GLH D ++LL L L + GNTV+VVEH+ D I+ ADH+ID+GP +G Sbjct: 883 GNTLYILDEPTTGLHFEDIKKLLKALDGLVEKGNTVLVVEHNLDVIKCADHIIDMGPLSG 942 Query: 566 VHGGEVVAEGPLEAIMAVPESLTGQYM------SGKRKIEVPKKRVPANPEKVLKLTGAR 619 GG VVAEG E I+ V ESLT + + S K+K + + L + GA Sbjct: 943 DKGGRVVAEGKPEDIIKVKESLTAKELKEILKPSKKKKENIKTEETKKEENTSLIIKGAN 1002 Query: 620 GNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQL--NGATIA-------EP 670 +NLK+++LTLP ITGVSGSGK++L DT+F QR+ + +T A E Sbjct: 1003 KHNLKNISLTLPKNQINVITGVSGSGKTSLAFDTIFKEGQRRFVESLSTYARRFLGRFED 1062 Query: 671 APYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFA 716 A I+GL I IDQ + R PRS AT T ++ R +FA Sbjct: 1063 ANVEKIEGLA---PAIAIDQKNVSRNPRSTVATVTEIYDYFRLIFA 1105 Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 41/111 (36%), Positives = 68/111 (61%), Gaps = 10/111 (9%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 63 I+++ T+NLKNI++ IP K++VVTG+SGSGKSSL DTLY ++R + S + Sbjct: 1618 IKLKNVSTNNLKNIDVDIPLKKIVVVTGVSGSGKSSLIIDTLYPALKKRRLNQYSKFES- 1676 Query: 64 FLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFAR 114 +E P + +S I ++Q S + RST+ + +++ D +R +FA+ Sbjct: 1677 ----VEIPSI-----VSDTILVDQISIVGSIRSTLVSYSKVFDKIRNIFAK 1718 >UniRef50_Q30RE0 Excinuclease ABC subunit A n=21 Tax=Campylobacterales RepID=Q30RE0_SULDN Length = 942 Score = 891 bits (2303), Expect = 0.0, Method: Compositional matrix adjust. Identities = 480/953 (50%), Positives = 642/953 (67%), Gaps = 33/953 (3%) Query: 2 DKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYA 61 D I++ GAR +NLKNI+L IP+++L+V TGLSGSGKS+LAFDTLYAEGQRRY+ESLS+YA Sbjct: 5 DVIKIVGARENNLKNISLEIPKNQLVVFTGLSGSGKSTLAFDTLYAEGQRRYMESLSSYA 64 Query: 62 RQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCP 121 RQFL + KPDVD IEGL+PAI+I+QK+TS NPRSTVGTITEI+DYLRLL+ARVG C Sbjct: 65 RQFLDRVGKPDVDKIEGLTPAIAIDQKTTSKNPRSTVGTITEIYDYLRLLYARVGIQHCH 124 Query: 122 DHDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARIDG 181 + ++ + S ++ V P+G +L+LLAPI+ E+KG + LE+L +GY+RA IDG Sbjct: 125 NCGKEISQMSASDIIGEVAKLPQGAKLVLLAPIVNEKKGTYADVLESLVHKGYVRAMIDG 184 Query: 182 EVCDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVADMDDPK 241 + L + +L KKHTI+VV+DR V + +R+A E AL+ S G + ++ + Sbjct: 185 VMVRLDEEIELSKTKKHTIKVVIDRVVVNEQNKERIAADVEKALKESYGELEIEILNHEE 244 Query: 242 A----EELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQN 297 + +S + AC C S LEP FSFN+P GAC CDGLG++ D D++I + Sbjct: 245 LGLGRSHMHYSEHNACFDCKVSFEPLEPLSFSFNSPKGACKECDGLGLRYALDQDKII-D 303 Query: 298 PELSLAGGAIR---GWDRRNFYYFQMLKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKE 354 +LS+ GAI+ G+++ YYF LK K D P+ L K +L+G G + Sbjct: 304 IDLSVEKGAIKIIYGFNKG--YYFTFLKGFCAQNKIDTTIPYSELEEYQKKAILHG-GID 360 Query: 355 NIEFKYMNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGTRL 414 F + +G R P G++ +K+ +ELA ++S + C+ C RL Sbjct: 361 EASFLW---KGHEVKRVWP--GIIKIAYDMFKD------EKELADYMSEKKCSVCSSHRL 409 Query: 415 RREARHVYVENTPLPAISDMSIGHAMEFF----NNLKLAGQRAKIAEKILKEIGDRLKFL 470 +RE+ V V + I DM I + E+F N Q A+++ IL EI +RL FL Sbjct: 410 KRESLSVRVAGKGIADILDMPISKSYEWFKEKSNFNYFTDQSAQVSAPILNEIRERLYFL 469 Query: 471 VNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGT 530 +VGL Y+TL R A T+SGGEAQRIR+ASQIG+GL GV+YVLDEPSIGLH+RD +L+ T Sbjct: 470 FDVGLGYITLGRDARTISGGEAQRIRIASQIGSGLTGVLYVLDEPSIGLHERDTLKLIRT 529 Query: 531 LIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQ 590 L L++ GN+VIVVEHD++ I AD ++DIG GAG GGEVV G L+ + ++LT Sbjct: 530 LRSLQEKGNSVIVVEHDKETIENADFIVDIGSGAGKFGGEVVFAGTLDKLKK-AKTLTAD 588 Query: 591 YMSGKRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLI 650 Y+ G++KIE +R +K +++ NN+ ++ + +P+ F CITGVSGSGKS+L+ Sbjct: 589 YLYGRKKIEYFYRRAQ---DKFIEIKNVTLNNINNLNVKIPLNNFVCITGVSGSGKSSLM 645 Query: 651 NDTLFPIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTP 710 TL P A+ LN A +I GLEH DKVI +DQSPIGRTPRSNPATYTG+ Sbjct: 646 LQTLLPTARELLNHARKVNKVAGVEINGLEHVDKVIYLDQSPIGRTPRSNPATYTGLMDE 705 Query: 711 VRELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKR 770 +R LF E++ RGYT RFSFNVRGGRCE CQG+G K+EMHFLPDI V CD C G R Sbjct: 706 IRNLFEQTKEAQIRGYTSSRFSFNVRGGRCEKCQGEGENKIEMHFLPDIMVKCDTCNGTR 765 Query: 771 YNRETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTL 830 YN++TLE+ YKGK I +VL+M++EEA EFF A+P L + L TL+DVGL YI LGQ+A TL Sbjct: 766 YNQQTLEVYYKGKNISDVLNMSVEEAYEFFKAIPKLNQILSTLVDVGLGYITLGQNAVTL 825 Query: 831 SGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEH 890 SGGEAQR+KL++ELS++ TG+TLYILDEPTTGLHFAD+ +L VLHK + GN++++IEH Sbjct: 826 SGGEAQRIKLSKELSRKDTGKTLYILDEPTTGLHFADVDRLTGVLHKFVELGNSVLIIEH 885 Query: 891 NLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECE---ASHTARFLKPML 940 NLD+IK AD+I+D+GPEGGSGGG I+ G PE VA+ S+T +L L Sbjct: 886 NLDMIKNADYIIDMGPEGGSGGGLIIAEGNPEEVAKNHKKSGSYTGEYLAKEL 938 >UniRef50_C2NRS3 Excinuclease ABC, A subunit n=2 Tax=Bacillus cereus group RepID=C2NRS3_BACCE Length = 1274 Score = 875 bits (2262), Expect = 0.0, Method: Compositional matrix adjust. Identities = 442/954 (46%), Positives = 626/954 (65%), Gaps = 18/954 (1%) Query: 1 MDKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAY 60 +DKI + GAR HNLKNINL IP+++L+V TG+SGSGKS+L FDT++AE QRR+V LS Y Sbjct: 320 LDKILIEGARHHNLKNINLSIPKNRLVVFTGVSGSGKSTLVFDTIFAEAQRRFVVGLSPY 379 Query: 61 ARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRC 120 R++L +E+P +D I GLSPAI+IEQKS S+NPRSTVGTITEI YLRLL++RVG P C Sbjct: 380 VRKYLDKVERPKLDSIYGLSPAIAIEQKSVSNNPRSTVGTITEISSYLRLLYSRVGIPEC 439 Query: 121 PDHDVPLAAQTVSQMVDNVLSQ-PEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARI 179 + QT + ++ S P + L APII + + N+ +GY + RI Sbjct: 440 IKCGTTIYPQTPRDIASSIYSYLPSNREFKLYAPIIIDSYVDSEYMFTNIRKEGYTQIRI 499 Query: 180 DGEVCDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALE-----LSGGTAVV 234 + E+ + D + K +I++V + F++ + L E F L L T Sbjct: 500 NQELKSIDDIEFINSDKAVSIDLVGETFRIPNKLEGFKKEEFINKLTNAIKVLQKVTKHT 559 Query: 235 ADMDDPKAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRV 294 +++ + +LF+ CP C EL + FSFN P G CP C+GLGV+Q DP+ + Sbjct: 560 LNIETEDNQIILFTTELLCPSCHSGFPELSSQHFSFNTPLGMCPDCNGLGVRQNIDPNLL 619 Query: 295 IQNPELSLAGGAIRGWDR-----RNFYYFQMLKSLADHYKFDVEAPWGSLSANVHKVVLY 349 ++NP LS+ GA+R + + + L + HY D+E PW L + H V+ Y Sbjct: 620 VENPNLSILDGALRWFGNLREGNKTTWPTGPLDVVYKHYNLDIETPWKDLPESFHNVIFY 679 Query: 350 GSGKENIEFKYMNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASC 409 GSGKE I KY + G + P +G++ + R Y ETES +++ ++ PC+SC Sbjct: 680 GSGKEKI--KYQSALGLKETLK-PVKGLIPEISRLYYETESEITKKKYGSYMKTAPCSSC 736 Query: 410 EGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNL--KLAGQRAKIAEKILKEIGDRL 467 +GTRL EAR V + + ++ + I A+++ ++ L +I E+++ E+ +RL Sbjct: 737 KGTRLCVEARSVRLGGKTISEVNALPINEALDWIKSVYENLDDTLMEIGEELIIEVYNRL 796 Query: 468 KFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERL 527 FL++VGL+YLT++R+A TLSGGE QR+RLASQ+ +G+VGV+YVLDEPS+GLH +D + L Sbjct: 797 SFLIDVGLHYLTINRTAPTLSGGEGQRVRLASQLSSGMVGVLYVLDEPSVGLHPKDIQSL 856 Query: 528 LGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESL 587 L TL+ LRD GN+VIVV+H+E+ +R AD +IDIGP AGV GGEV+++G +M SL Sbjct: 857 LKTLLKLRDQGNSVIVVDHEEEIMRNADWLIDIGPKAGVLGGEVMSQGDPGHVMNDSNSL 916 Query: 588 TGQYMSGKRKIEVPKKRVPAN-PEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGK 646 TG+Y+SG+ + P + P L L GA NNL +VT P+G FTC+TG+SGSGK Sbjct: 917 TGKYLSGELTVHAPSWHLKREAPTDWLTLKGASQNNLNNVTANFPLGRFTCVTGLSGSGK 976 Query: 647 STLINDTLFPIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTG 706 S+LI +TL P+ ++ LN + + +P Y +I G+E + VI++ Q+PIGRTPRSNPATYT Sbjct: 977 SSLIGETLEPLLEKILNNSDV-KPGVYEEIIGVEKLENVINVSQAPIGRTPRSNPATYTN 1035 Query: 707 VFTPVRELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQC 766 +F +R +F+ ++ + FSFN GRCE CQG G +KVEMHFL D+++ C++C Sbjct: 1036 LFNKIRRVFSNTKDAMDNWLSYDHFSFNSAKGRCENCQGQGQVKVEMHFLADVWITCNEC 1095 Query: 767 KGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQS 826 KGKR+ E L +K KGK I +VL+M + EA E+F + R LQT DVGL YI+LGQS Sbjct: 1096 KGKRFKPEVLAVKRKGKNISDVLNMDVNEAIEYFKEHKDIVRILQTFCDVGLDYIKLGQS 1155 Query: 827 ATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIV 886 ATTLSGGEAQRVKLARELSK+ G+ +YILDEPTTGLHF DIQ LL++LH+L D+G+T++ Sbjct: 1156 ATTLSGGEAQRVKLARELSKKTKGKMIYILDEPTTGLHFNDIQYLLNILHRLVDEGHTVI 1215 Query: 887 VIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLKPML 940 VIEH+LDVIKTADWI++LGPEGG GG+I+ +PE + + S+T + L+ ++ Sbjct: 1216 VIEHDLDVIKTADWIIELGPEGGKAGGDIIAQCSPEELIAVKESYTGQALRRLM 1269 Score = 135 bits (340), Expect = 7e-30, Method: Compositional matrix adjust. Identities = 77/196 (39%), Positives = 113/196 (57%), Gaps = 15/196 (7%) Query: 406 CASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGD 465 C C+G R + E V + + + +M + A+E+F K K+I Sbjct: 1092 CNECKGKRFKPEVLAVKRKGKNISDVLNMDVNEAIEYF--------------KEHKDIVR 1137 Query: 466 RLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVM-YVLDEPSIGLHQRDN 524 L+ +VGL+Y+ L +SA TLSGGEAQR++LA ++ G M Y+LDEP+ GLH D Sbjct: 1138 ILQTFCDVGLDYIKLGQSATTLSGGEAQRVKLARELSKKTKGKMIYILDEPTTGLHFNDI 1197 Query: 525 ERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVP 584 + LL L L D G+TVIV+EHD D I+ AD +I++GP G GG+++A+ E ++AV Sbjct: 1198 QYLLNILHRLVDEGHTVIVIEHDLDVIKTADWIIELGPEGGKAGGDIIAQCSPEELIAVK 1257 Query: 585 ESLTGQYMSGKRKIEV 600 ES TGQ + K+ V Sbjct: 1258 ESYTGQALRRLMKLNV 1273 >UniRef50_B6WY93 Putative uncharacterized protein n=1 Tax=Desulfovibrio piger ATCC 29098 RepID=B6WY93_9DELT Length = 976 Score = 875 bits (2261), Expect = 0.0, Method: Compositional matrix adjust. Identities = 466/967 (48%), Positives = 625/967 (64%), Gaps = 42/967 (4%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 63 I + AR HNLK+I+L IPRD+L+VV G SGSGKS+LAFD +YAEGQRRYVESLSAYARQ Sbjct: 6 IHIEKARQHNLKDISLDIPRDELVVVCGPSGSGKSTLAFDIVYAEGQRRYVESLSAYARQ 65 Query: 64 FLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCPDH 123 FL M+KPDV+ IEGLSPAIS+EQ+STS PRSTVGT+TEIHD+LR+ FAR+G CP Sbjct: 66 FLPQMDKPDVEKIEGLSPAISLEQQSTSRTPRSTVGTVTEIHDFLRVFFARLGRMYCPSC 125 Query: 124 DVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARIDGEV 183 P+ A++ +++ ++++ P+G + M++AP+++ +KG H + L ++G+ R R+DG Sbjct: 126 GRPIEARSADEIITDIMALPQGSKFMVMAPLVELQKGTHQDKFKKLRAEGFARVRVDGAF 185 Query: 184 CDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVADMDDPKAE 243 L D P L+ KKH+I++VVDR +D + RLA+S E AL G V D P+ E Sbjct: 186 HTLDDVPALDKNKKHSIDLVVDRLVNKDGIRGRLADSVELALRYGEGRLTVHLPDRPEGE 245 Query: 244 -ELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPELSL 302 +++ S CP C S+ P+LFSFN+P GACP C GLG YF+P + N LSL Sbjct: 246 RDIIHSTTSVCPHCHISLPAPSPQLFSFNSPQGACPRCVGLGTVDYFEPRLIAPNRGLSL 305 Query: 303 AGGAIRGWDRRNFY--YFQMLKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKE------ 354 GA+ W + Y L++L + + F + P S + YG ++ Sbjct: 306 NTGALLPWAESKHFQRYEPALRALGERHGFTLSTPLEDFSDAALACLFYGEDEKGRPAAH 365 Query: 355 -----------NIEFKYMND---------RGDTSIRRHPFEGVLHNMERRYKETESSAVR 394 N+ D + + + GV+ +E+ + E A R Sbjct: 366 SSGLRRNWMGGNVAMDATGDYQSELFAGRAAEVKVSEERWPGVIPLLEKGMQYGE--AWR 423 Query: 395 EELAKFISNRPCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAK 454 E LA+F + C C G RL+ EA V V++ + +S+ A+ + G+ A Sbjct: 424 EILARFRQSTDCPDCHGARLKPEALAVRVDDLNIAQFCSLSVERALRWLEERHFDGRHAL 483 Query: 455 IAEKILKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDE 514 +AE +LKE+ RL F+ NVGL YL+L R+ TLSGGEAQRIRLASQ+G+GLVGV YVLDE Sbjct: 484 VAEPLLKELTHRLSFMRNVGLEYLSLGRAMATLSGGEAQRIRLASQLGSGLVGVTYVLDE 543 Query: 515 PSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAE 574 PSIGLH RDNERLLGTL L+ GNTV+VVEHDE I AAD VI++GPG+G GGE++ + Sbjct: 544 PSIGLHPRDNERLLGTLRSLQRRGNTVLVVEHDEATICAADTVIELGPGSGSQGGEIMFQ 603 Query: 575 GPLEAIMAVPESLTGQYMSGKRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGL 634 G + ++ ++LT +Y+ G I +P +R P+ L L NNL+ + P+G+ Sbjct: 604 GSVPQLLRA-DTLTARYLRGDASISLPDER--REPQGWLTLHNVTTNNLRGIDCRFPLGV 660 Query: 635 FTCITGVSGSGKSTLINDTLF-----PIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDID 689 TC+TGVSGSGKS+L+ DTL+ + QR TIA + +G ++++ ID Sbjct: 661 LTCVTGVSGSGKSSLVVDTLYKHLAISLGQRVDQPGTIAGLSYS---EGARPIERIVAID 717 Query: 690 QSPIGRTPRSNPATYTGVFTPVRELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVI 749 Q+PIGRTPRSNPATYT VF +R +FA P++R RGY PGRFSFNVRGGRCEAC GDG I Sbjct: 718 QTPIGRTPRSNPATYTKVFDEIRNIFAMTPDARKRGYKPGRFSFNVRGGRCEACGGDGQI 777 Query: 750 KVEMHFLPDIYVPCDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARK 809 +VEMHFLPD+YV CD CKG+RYN ETLE++YKG I EVLD+ +++AR FF+ P L R+ Sbjct: 778 RVEMHFLPDVYVTCDVCKGRRYNHETLEVRYKGLNIAEVLDLPVQQARAFFENYPVLERR 837 Query: 810 LQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQ 869 L L +VGL Y+RLGQ ATTLSGGEAQR+K++REL KR TLYILDEPTTGLH ++ Sbjct: 838 LAVLEEVGLEYLRLGQPATTLSGGEAQRIKISRELGKRSLPGTLYILDEPTTGLHMHEVG 897 Query: 870 QLLDVLHKLRDQGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEA 929 +L+ VLH L D+G ++VVIEHN D+I AD ++D+GP GG GG ++ GTPE + Sbjct: 898 KLIKVLHALVDKGASVVVIEHNTDMILAADHVLDMGPGGGENGGLVVSQGTPEAIVADPN 957 Query: 930 SHTARFL 936 S T RFL Sbjct: 958 SVTGRFL 964 Score = 121 bits (303), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 77/199 (38%), Positives = 116/199 (58%), Gaps = 15/199 (7%) Query: 406 CASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGD 465 C C+G R E V + + + D+ + A FF N + + Sbjct: 791 CDVCKGRRYNHETLEVRYKGLNIAEVLDLPVQQARAFFENYPV--------------LER 836 Query: 466 RLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGA-GLVGVMYVLDEPSIGLHQRDN 524 RL L VGL YL L + A TLSGGEAQRI+++ ++G L G +Y+LDEP+ GLH + Sbjct: 837 RLAVLEEVGLEYLRLGQPATTLSGGEAQRIKISRELGKRSLPGTLYILDEPTTGLHMHEV 896 Query: 525 ERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVP 584 +L+ L L D G +V+V+EH+ D I AADHV+D+GPG G +GG VV++G EAI+A P Sbjct: 897 GKLIKVLHALVDKGASVVVIEHNTDMILAADHVLDMGPGGGENGGLVVSQGTPEAIVADP 956 Query: 585 ESLTGQYMSGKRKIEVPKK 603 S+TG+++ +R+ + ++ Sbjct: 957 NSVTGRFLMQERRDRLKRR 975 >UniRef50_B8DJB0 Excinuclease ABC, A subunit n=2 Tax=Desulfovibrio RepID=B8DJB0_DESVM Length = 1131 Score = 871 bits (2251), Expect = 0.0, Method: Compositional matrix adjust. Identities = 460/993 (46%), Positives = 640/993 (64%), Gaps = 68/993 (6%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 63 I + GAR HNLKN+ L IPRD+L+VV G SGSGKS+LAFD +YAEGQRRYVESLSAYARQ Sbjct: 6 IHIEGARQHNLKNVTLDIPRDELVVVCGPSGSGKSTLAFDIVYAEGQRRYVESLSAYARQ 65 Query: 64 FLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCPDH 123 FL M+KP+V+ IEGLSPAIS+EQ++ + NPRSTVGT+TE++D+LR+ +AR+G CP Sbjct: 66 FLPQMDKPEVEKIEGLSPAISLEQQTATRNPRSTVGTVTEVYDFLRVFWARLGRMYCPQC 125 Query: 124 DVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARIDGEV 183 +P+ A+ +++ ++L+ EG R ++LAP+++ +KG H + L ++G++R R++G + Sbjct: 126 GLPIEARAADEIIADILALGEGTRCIVLAPLVEYQKGTHIDRFKKLKAEGFVRVRVNGAI 185 Query: 184 CDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVV--------- 234 + + P L+ +KHTI++VVDR ++D + RLA+S E AL G VV Sbjct: 186 MGIDEVPALDKNRKHTIDLVVDRLVIKDGIRGRLADSVELALRYGDGRLVVHLPAEGTGG 245 Query: 235 -------ADMDDPKAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQ 287 +++ S CP+C S+ P+LFSFN+P GACP C GLG + Sbjct: 246 KDGKDAGDGKGGNAGRDIVHSTESVCPVCRISLPAPSPQLFSFNSPQGACPRCLGLGSVE 305 Query: 288 YFDPDRVIQNPELSLAGGAIRGWDRRNFY--YFQMLKSLADHYKFDVEAPWGSLSANVHK 345 YF+P V N LSL GA+ W + + L +L + F + P + SA+ Sbjct: 306 YFEPALVAPNRGLSLNTGALLPWKNTKLFERHRDALTALGKRWGFTLSTPLAAYSADALD 365 Query: 346 VVLYGSGKE----------NIEFKYM------------------NDRGDT---------- 367 + +G ++ N+ ++ +D G Sbjct: 366 ALFHGETEDGRPAGRGAGSNLRRNWLGGSVVVGGNGNGENAGNGHDHGPALPVTPAAANG 425 Query: 368 -SIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGTRLRREARHVYVENT 426 ++ + GV+ +E+ + + A RE L+++ + C C G RLR E+ V V++ Sbjct: 426 GAVTADRWPGVVSILEQGMQYGD--AWRELLSRYRQSMACPVCSGARLRPESLSVRVDSL 483 Query: 427 PLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTLSRSAET 486 + MS+ A+++ + G+ A +AE ++KE+ RL+F+VNVGL+Y+ L R+ T Sbjct: 484 NIHEFCSMSVARALDWLRERRFEGRHALVAEPLMKELHHRLEFMVNVGLDYIALGRNMAT 543 Query: 487 LSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEH 546 LSGGEAQRIRLASQ+G+GLVGV YVLDEPSIGLH RDNERL+ TL L+ GNTV+VVEH Sbjct: 544 LSGGEAQRIRLASQLGSGLVGVTYVLDEPSIGLHPRDNERLIKTLRSLQRRGNTVLVVEH 603 Query: 547 DEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEVPKKRVP 606 DE IR AD VI++GPG+G GGEVV GP++ +++ +SLT QY+ G + + + R Sbjct: 604 DEATIREADTVIELGPGSGALGGEVVFNGPVDTLLSSSQSLTAQYLRGD--MAIARPRAR 661 Query: 607 ANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLF---PIAQRQLN 663 P + L G NNL+ + +P+GL TC+TGVSGSGKS+L+ DTL+ +AQ Sbjct: 662 RAPRGWMTLHGVTTNNLQGIDCRVPLGLLTCVTGVSGSGKSSLVMDTLYKHLALAQ---- 717 Query: 664 GATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESRA 723 G + +P I+G E ++++ IDQ+PIGRTPRSNPATYT +F +R +FA P++R Sbjct: 718 GIRVDQPGTIEGIEGAETIERIVSIDQTPIGRTPRSNPATYTKIFDEIRGIFAMTPDARK 777 Query: 724 RGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKYKGK 783 RGY PGRFSFNVRGGRCEAC GDG I+VEMHFLPD+YV CD CKG+RYN ETLE++YKG Sbjct: 778 RGYKPGRFSFNVRGGRCEACGGDGQIRVEMHFLPDVYVTCDVCKGRRYNHETLEVRYKGL 837 Query: 784 TIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARE 843 I EVLD+T+ +AR+FF+ P L R+L L DVGL Y+RLGQ ATTLSGGEAQR+K++RE Sbjct: 838 NIAEVLDLTVRQARQFFENYPVLERRLGVLEDVGLEYLRLGQPATTLSGGEAQRIKISRE 897 Query: 844 LSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADWIVD 903 L KR T+YILDEPTTGLH ++ +L+ VL++L D+G T+ VIEHN DVI +D +VD Sbjct: 898 LGKRSLPGTMYILDEPTTGLHMHEVGKLITVLNQLVDRGATVTVIEHNTDVILASDHVVD 957 Query: 904 LGPEGGSGGGEILVSGTPETVAECEASHTARFL 936 LGP GG GG I+ +GTPE + + S T FL Sbjct: 958 LGPGGGENGGRIVSAGTPEEIMDDPHSVTGSFL 990 Score = 127 bits (320), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 70/189 (37%), Positives = 112/189 (59%), Gaps = 15/189 (7%) Query: 763 CDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREF-----FDAVPALA---------R 808 C C G R E+L ++ IHE M++ A ++ F+ AL Sbjct: 463 CPVCSGARLRPESLSVRVDSLNIHEFCSMSVARALDWLRERRFEGRHALVAEPLMKELHH 522 Query: 809 KLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADI 868 +L+ +++VGL YI LG++ TLSGGEAQR++LA +L G T Y+LDEP+ GLH D Sbjct: 523 RLEFMVNVGLDYIALGRNMATLSGGEAQRIRLASQLGSGLVGVT-YVLDEPSIGLHPRDN 581 Query: 869 QQLLDVLHKLRDQGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECE 928 ++L+ L L+ +GNT++V+EH+ I+ AD +++LGP G+ GGE++ +G +T+ Sbjct: 582 ERLIKTLRSLQRRGNTVLVVEHDEATIREADTVIELGPGSGALGGEVVFNGPVDTLLSSS 641 Query: 929 ASHTARFLK 937 S TA++L+ Sbjct: 642 QSLTAQYLR 650 Score = 123 bits (308), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 81/205 (39%), Positives = 114/205 (55%), Gaps = 18/205 (8%) Query: 406 CASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGD 465 C C+G R E V + + + D+++ A +FF N + + Sbjct: 817 CDVCKGRRYNHETLEVRYKGLNIAEVLDLTVRQARQFFENYPV--------------LER 862 Query: 466 RLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGA-GLVGVMYVLDEPSIGLHQRDN 524 RL L +VGL YL L + A TLSGGEAQRI+++ ++G L G MY+LDEP+ GLH + Sbjct: 863 RLGVLEDVGLEYLRLGQPATTLSGGEAQRIKISRELGKRSLPGTMYILDEPTTGLHMHEV 922 Query: 525 ERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVP 584 +L+ L L D G TV V+EH+ D I A+DHV+D+GPG G +GG +V+ G E IM P Sbjct: 923 GKLITVLNQLVDRGATVTVIEHNTDVILASDHVVDLGPGGGENGGRIVSAGTPEEIMDDP 982 Query: 585 ESLTGQYM---SGKRKIEVPKKRVP 606 S+TG ++ R VP RVP Sbjct: 983 HSVTGSFLVQEHATRHPGVPMPRVP 1007 >UniRef50_Q01SK3 Excinuclease ABC subunit A n=20 Tax=Bacteria RepID=Q01SK3_SOLUE Length = 929 Score = 846 bits (2185), Expect = 0.0, Method: Compositional matrix adjust. Identities = 467/964 (48%), Positives = 598/964 (62%), Gaps = 62/964 (6%) Query: 2 DKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYA 61 D I +RGAR HNLKNI+L IP ++L VVTG+SGSGKSSLAFDT+YAEGQRRYVESLSAYA Sbjct: 3 DYIAIRGARVHNLKNISLCIPHNQLTVVTGVSGSGKSSLAFDTIYAEGQRRYVESLSAYA 62 Query: 62 RQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCP 121 RQFL MEKPDVD I+G++PA++I QK+T+ NPRSTV T TE D+LRLL+ARVG+ CP Sbjct: 63 RQFLERMEKPDVDDIDGIAPAVAIRQKNTTRNPRSTVATSTECFDFLRLLYARVGQTFCP 122 Query: 122 DHDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKT------LENLASQGYI 175 + TV Q+ VL P+G R L P GEH T L L +G+ Sbjct: 123 TCGTRVIKDTVDQVAARVLQYPQGSRWYALFPC-----GEHASTDALRDHLFELRKKGFN 177 Query: 176 RARIDGEVCDLSDPPKL-ELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVV 234 R G + + S P L ++ + ++VDR + DL QRL +S E +G V Sbjct: 178 RLFQAGRLFEFSTPESLLDIDFTKPLFILVDRIAISPDLHQRLVDSIEICYREAGE---V 234 Query: 235 ADMDDPKAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRV 294 + E+L F+ F C C EP LFSFN+P GACP C G G FD +RV Sbjct: 235 IFENASTGEQLRFNERFQCKTCLMEFNPPEPILFSFNSPFGACPRCQGFGNTIDFDMNRV 294 Query: 295 IQNPELSLAGGAIRGWDRRNFYYFQMLKSLADH-YKFDVEAPWGSLSANVHKVVLYGSGK 353 I +P L+L GA+ W + Y L + H K P L+A Sbjct: 295 IPDPGLTLDEGAVDPWTKPK--YRSWLGNFKKHRAKVRTNVPVCDLTAA----------- 341 Query: 354 ENIEFKYMNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGTR 413 D D IRR F+ H ++YK VR L+++ C C G R Sbjct: 342 -------ERDTLDEFIRRF-FD---HLETKKYK----VHVRVFLSRYRGYALCPDCRGAR 386 Query: 414 LRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNV 473 LR+EA +V V L I M+I A EFF +L L+ + IAEKIL EI RLKFL +V Sbjct: 387 LRKEALYVRVAGRNLADIVRMNIAEAQEFFLSLSLSPEETAIAEKILVEIRQRLKFLNDV 446 Query: 474 GLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIH 533 GL YLTL R A TLSGGEAQRI+LA+ +G+ LVG YVLDEPSIGLH RD RL+ L Sbjct: 447 GLEYLTLDRLASTLSGGEAQRIQLATSLGSRLVGACYVLDEPSIGLHSRDTGRLIRILEE 506 Query: 534 LRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMS 593 LR LGNT++VVEHD + +R+ADH++D+GPGAG HGGE+V EG L ++ +SLT +Y+ Sbjct: 507 LRGLGNTIVVVEHDPNVMRSADHIVDLGPGAGEHGGEIVFEGNLPTLIQSGDSLTAKYLR 566 Query: 594 GKRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDT 653 G+ K+ P+ R +P + ++ GAR +NLK+V + +P+G+ +TGVSGSGKSTL++D Sbjct: 567 GELKVSAPRVRRTVDPRRTMRFNGARVHNLKNVDVEIPLGMMVVVTGVSGSGKSTLVHDV 626 Query: 654 LFPIAQ--------RQLNGATIAEP----AP-----YRDIQGLEHFDKVIDIDQSPIGRT 696 ++ + R GAT AEP AP R ++G E + IDQSPIGRT Sbjct: 627 IYRSLEALHKARDARDDGGAT-AEPELGDAPGPQLMCRKVEGAERISTTVMIDQSPIGRT 685 Query: 697 PRSNPATYTGVFTPVRELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFL 756 PRSNP TY F +R LFA ++ RGYT G FSFN+ GGRCE CQGDG + VEM FL Sbjct: 686 PRSNPVTYIKAFELIRALFASTRDAEKRGYTAGHFSFNIPGGRCETCQGDGTVTVEMQFL 745 Query: 757 PDIYVPCDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDV 816 D+ + C++CKG RY LEIKY G+ IHEVL +T+ EA +FF A P L ++L+ L DV Sbjct: 746 ADVELMCEECKGTRYKSGILEIKYNGRNIHEVLQLTVREAMDFFHAAPKLVQRLKVLDDV 805 Query: 817 GLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLH 876 GL Y+RLGQSATTLSGGEAQRVKLA LS TL+I DEPTTGLHF DI +LL Sbjct: 806 GLGYLRLGQSATTLSGGEAQRVKLAAHLSTASNAGTLFICDEPTTGLHFDDIAKLLAAFQ 865 Query: 877 KLRDQGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFL 936 +L + G ++V+IEHNLDVIK ADW++DLGPEGGS GG+I+ +G PE +A + S+T +L Sbjct: 866 RLIENGGSLVIIEHNLDVIKAADWVIDLGPEGGSRGGQIVATGPPEVIAVAKDSYTGHYL 925 Query: 937 KPML 940 + +L Sbjct: 926 REVL 929 >UniRef50_Q6SI25 Excinuclease ABC, A subunit n=1 Tax=uncultured marine bacterium 105 RepID=Q6SI25_9BACT Length = 985 Score = 845 bits (2183), Expect = 0.0, Method: Compositional matrix adjust. Identities = 452/981 (46%), Positives = 604/981 (61%), Gaps = 64/981 (6%) Query: 3 KIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYAR 62 +I ++GARTHNLK I+L + +++L+V+TG+SGSGKSSLAFDTLYAEGQRRYVESLSAYAR Sbjct: 11 QIIIQGARTHNLKGIDLTLSKNQLVVITGVSGSGKSSLAFDTLYAEGQRRYVESLSAYAR 70 Query: 63 QFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCPD 122 QFL MEKPDVD I+G+SPAI+I QK++ NPRSTVGT TEI+DYLRLLFAR G+ C Sbjct: 71 QFLERMEKPDVDRIDGISPAIAIRQKNSIRNPRSTVGTTTEINDYLRLLFARAGQTICRQ 130 Query: 123 HDVPLAAQT-------VSQMVDN-----------VLSQPEGKRLMLLAPIIKERKGEH-- 162 P+ +T ++Q+ D V E + L +++E E Sbjct: 131 CGRPVTRETAEVVAKKLTQLTDVTHLFVGFVMPLVTGAAEVDKKEELPALVEEETTEDGV 190 Query: 163 --------------------TKTLENLASQGYIRARIDGEVCDLSDPPKLELQKKHTIEV 202 T+E L +G+ R +DG D +EV Sbjct: 191 SKVGGSGNGTLESLQAVDLIQATIETLRRKGFGRLYVDGRAVAFKDVNVAAQVNGSILEV 250 Query: 203 VVDRFKVRDDLTQRLAESFETALELSGGTAVVADMDDPKAEELL--FSANFACPICGYSM 260 VVDR KV ++ RL +S E A GGTA V ++D + FS +F C C Sbjct: 251 VVDRIKVAPEMLTRLTDSIEIAYHEGGGTAFVIEVDQAGSGTTRHEFSEHFECRTCDLGY 310 Query: 261 RELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPELSLAGGAIRGWDRRNF-YYFQ 319 +PRLFSFNNP GACPTC G G D + V+ +P S+ AI W + ++ Sbjct: 311 EVPQPRLFSFNNPFGACPTCHGFGNIIELDMNLVVPDPSRSVQQDAIEPWSKPHYRKKLA 370 Query: 320 MLKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKENIEFKYMNDRGDTSIRRHPFEGVLH 379 LK A K ++ PW +S + ++ G G+ G IR G Sbjct: 371 DLKRAARVQKISLDVPWEEMSDQDRQFIIEGDGQ-----------GYDGIR-----GFFR 414 Query: 380 NMERRYKETESSAVREELAKFISNRPCASCEGTRLRREARHVYVENTPLPAISDMSIGHA 439 +ER+ + +R L+++ C C GTRLR EAR V V+ + I +++ Sbjct: 415 RLERKKYKVH---IRVFLSRYRGYLKCPDCAGTRLRPEARDVQVDGRTIDQICALTVSEG 471 Query: 440 MEFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLAS 499 FF+NL L + I E++L EI RL FL +VGL+YLTL R + TLSGGEAQRI LA+ Sbjct: 472 AVFFSNLALDDRENAIVERVLNEIQKRLTFLGDVGLDYLTLDRLSSTLSGGEAQRINLAT 531 Query: 500 QIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVID 559 +G+ LVG +YVLDEPSIGLH RDN+RL+ L LRD GNTV+VVEHD D IR ADHV+D Sbjct: 532 SLGSALVGTLYVLDEPSIGLHPRDNQRLIAILQRLRDQGNTVVVVEHDADMIRVADHVVD 591 Query: 560 IGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEVPKKRVPANPEKVLKLTGAR 619 +G GAG HGG VV GP E ++ SLT +Y+ + I +P+KR +K L++ GA Sbjct: 592 LGLGAGDHGGSVVFTGPFEELLVQKRSLTAKYLRDELAIPIPQKRRKLREQK-LRVFGAS 650 Query: 620 GNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAEPAPYRDIQGL 679 +NL+D+ + +P+ + TC+TGVSGSGKSTL++D L+ +R + G+ +R I+G Sbjct: 651 EHNLQDIDVEIPLNMLTCVTGVSGSGKSTLVHDVLYAGLKR-IKGSWDKPIGAHRAIEGA 709 Query: 680 EHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESRARGYTPGRFSFNVRGGR 739 E D V IDQ+PIGRTPRSNP TY F P+R L A +++A TP FSFNV GGR Sbjct: 710 ELLDDVALIDQAPIGRTPRSNPVTYLKAFDPIRALLASTKDAKALALTPSHFSFNVPGGR 769 Query: 740 CEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREF 799 C+ C+G GV++VEM FL D++VPCDQC G RY + LE+KY+G+ + ++L+MT+ E F Sbjct: 770 CDTCEGQGVVRVEMQFLADVFVPCDQCNGARYKPQVLEVKYRGRNVDQILNMTVREGLLF 829 Query: 800 FDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEP 859 F+ + R+LQ L ++GL Y+RLGQ ATTLSGGEAQR+K+A LS G+ +TLYILDEP Sbjct: 830 FNTSQKVLRRLQVLDEIGLGYLRLGQLATTLSGGEAQRIKIASRLSAHGSDRTLYILDEP 889 Query: 860 TTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSG 919 TTGLHF DI +LL KL G+T++VIEHNLDVIK ADWI+DLGPEGG GG+++ +G Sbjct: 890 TTGLHFDDIAKLLTAFRKLLQAGHTLLVIEHNLDVIKMADWIIDLGPEGGLAGGQVVAAG 949 Query: 920 TPETVAECEASHTARFLKPML 940 PE +A+ E SHT R+L+ +L Sbjct: 950 PPEALAKVEHSHTGRYLREVL 970 >UniRef50_B5JM86 Excinuclease ABC, A subunit n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JM86_9BACT Length = 949 Score = 844 bits (2180), Expect = 0.0, Method: Compositional matrix adjust. Identities = 454/944 (48%), Positives = 611/944 (64%), Gaps = 17/944 (1%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 63 I ++GAR HNLKNI L IPR+KL+V+TG+SGSGKSSLAFDTLYAEG R+YVESLS ARQ Sbjct: 11 IHIKGAREHNLKNIELRIPRNKLVVITGVSGSGKSSLAFDTLYAEGYRKYVESLSTQARQ 70 Query: 64 FLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCPDH 123 + +++PDVD I GLSP ++IEQ++++ +PRST+ T+TEI DY RLL+ GE RCP Sbjct: 71 VMDQLKRPDVDFIHGLSPVLAIEQRASNASPRSTIATVTEIADYARLLWVIRGEQRCPKD 130 Query: 124 DVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARIDGEV 183 + QT+ VD L PE R M+LAP ++ + + L L +G+ R RI GE+ Sbjct: 131 GGIIQRQTLDGAVDQALQLPERSRAMVLAPYMEAKPAVLREELPRLRQKGFQRVRIAGEI 190 Query: 184 CDLSDPPKLELQKKHT-IEVVVDRFKVRDDLTQRLAESFETALELSGGTAVV--ADMDDP 240 ++ DP + +++VVDR + D RLA+S E A A+V + D Sbjct: 191 VEVDDPEAATKGRSAVQMDIVVDRLVIGPDQRSRLADSLELAFSEGKDRALVLYQESRDA 250 Query: 241 KAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPEL 300 +EL S NF+C CG + PR FSFN G+CP C GLG + F + V+ +P Sbjct: 251 DWQELSLSRNFSCSDCGEVYEPVTPRHFSFNTAEGSCPECGGLGETRRFLDELVVPDPSK 310 Query: 301 SLAGGAIR----GWDRRNFYYFQMLKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKENI 356 S+ GA++ G + + +L+ LA+ FD PW L + +L+G Sbjct: 311 SVKKGALKPLRIGGKQLIIRHNALLRQLAEQLPFDPLTPWEDLPEETRQQILHGVPDREF 370 Query: 357 EFKYMNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGTRLRR 416 EFK R T PFEG++ + + +ET+S R L + + + C C G R Sbjct: 371 EFKLT--RRKTKPAPAPFEGIVPILMKAARETKSDGYRARLMTYQTEQDCPGCHGHRFSP 428 Query: 417 EARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNVGLN 476 + +V+V+ LP M I A F + L A ++++ I RL+FL VGL+ Sbjct: 429 RSANVFVDGVSLPEFLAMDIEKAYAFVSKLDRASSEVSTYGEVIEGIEFRLRFLKEVGLD 488 Query: 477 YLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRD 536 YLTL+R TLSGGE+QR+RLA+Q+G L+GV+YVLDEPSIGLH +DN +L+ TL LRD Sbjct: 489 YLTLNRGYGTLSGGESQRVRLATQLGMSLMGVVYVLDEPSIGLHAKDNLKLVQTLKELRD 548 Query: 537 LGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESL--TGQYMSG 594 +GN+VIVVEHDE+ +RAADH+I+IGPGAG+HGGEV+ EG + + P+ + TG Y+SG Sbjct: 549 VGNSVIVVEHDEEMMRAADHLIEIGPGAGLHGGEVLYEGDPKKCIGNPDRMQSTGAYLSG 608 Query: 595 KRKIEVPKKRVPAN--PEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLIND 652 K +V K VP EK +++ A +NLK+ T +PVGL TC+TGVSGSGKSTL+ND Sbjct: 609 K---QVLTKGVPTLELTEKWIEIKEASHHNLKNATARIPVGLLTCVTGVSGSGKSTLVND 665 Query: 653 TLFPIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVR 712 L A R+LN + P ++ I G E+F++V+ + Q PIG++PRSNPATYT +F +R Sbjct: 666 ILAKAAARKLNRSKDI-PGAHKGIDGFEYFERVVRVSQEPIGQSPRSNPATYTKLFDELR 724 Query: 713 ELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYN 772 L+ VP SR RGY GRFSFN+RGGRCE CQG G IK++M F+ D Y+ C C GKRYN Sbjct: 725 TLYTKVPLSRTRGYKAGRFSFNIRGGRCERCQGQGAIKLDMLFMSDAYIECPSCNGKRYN 784 Query: 773 RETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSG 832 RETLE KY G I E L+++++EA E F VP + KL TL VGL Y++LGQ+A TLSG Sbjct: 785 RETLEAKYGGINIAEALELSVDEACEKFKNVPRIIEKLNTLEQVGLGYLKLGQAANTLSG 844 Query: 833 GEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNL 892 GEAQR+KL+ ELSKR +G+ LYILDEPTTGLH+ADIQ+L D+L +LRDQGNT+VVIEH+L Sbjct: 845 GEAQRLKLSLELSKRNSGKNLYILDEPTTGLHWADIQRLSDLLFRLRDQGNTVVVIEHHL 904 Query: 893 DVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFL 936 D I ADW +DLGP GGS GGE++ SG+ + + +C S T L Sbjct: 905 DFIGLADWAIDLGPGGGSRGGEVVYSGSVDGMLKCRRSETGMAL 948 Score = 109 bits (273), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 77/189 (40%), Positives = 102/189 (53%), Gaps = 15/189 (7%) Query: 406 CASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGD 465 C SC G R RE + ++S+ A E F N+ +I EK Sbjct: 775 CPSCNGKRYNRETLEAKYGGINIAEALELSVDEACEKFKNV------PRIIEK------- 821 Query: 466 RLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGV-MYVLDEPSIGLHQRDN 524 L L VGL YL L ++A TLSGGEAQR++L+ ++ G +Y+LDEP+ GLH D Sbjct: 822 -LNTLEQVGLGYLKLGQAANTLSGGEAQRLKLSLELSKRNSGKNLYILDEPTTGLHWADI 880 Query: 525 ERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVP 584 +RL L LRD GNTV+V+EH D I AD ID+GPG G GGEVV G ++ ++ Sbjct: 881 QRLSDLLFRLRDQGNTVVVIEHHLDFIGLADWAIDLGPGGGSRGGEVVYSGSVDGMLKCR 940 Query: 585 ESLTGQYMS 593 S TG +S Sbjct: 941 RSETGMALS 949 >UniRef50_Q027K1 Excinuclease ABC subunit A n=2 Tax=Bacteria RepID=Q027K1_SOLUE Length = 960 Score = 842 bits (2176), Expect = 0.0, Method: Compositional matrix adjust. Identities = 449/958 (46%), Positives = 609/958 (63%), Gaps = 31/958 (3%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 63 I V+GAR HNLKN++L +PRD+LIVVTGLSGSGKSSLAFDT+YAEGQRRY+ESLS YA++ Sbjct: 12 IAVQGARVHNLKNVSLTLPRDRLIVVTGLSGSGKSSLAFDTIYAEGQRRYMESLSTYAKR 71 Query: 64 FLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCPDH 123 F++ + KPDVD + GLSP ISIEQK+ NPRSTVGT+T+I YL LLFA + EP CP Sbjct: 72 FVAQVAKPDVDFVFGLSPVISIEQKTIGSNPRSTVGTMTDIASYLNLLFATIAEPHCPRT 131 Query: 124 DVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARIDGEV 183 +A +T +Q+++ +L+ PEG + L AP+ E + +G + IDG Sbjct: 132 GERVANRTANQILEAILALPEGTEIELRAPVFPVYGEELEFVFTEVRKKGCRQLVIDGRR 191 Query: 184 CDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVADMDDP-KA 242 DL++ L+ + ++ VVDRF V + + L + G V + KA Sbjct: 192 VDLANELDLDETQVRDMDAVVDRFIVSAKHEKAIKAGIAATLLVGDGLMQVQILKGANKA 251 Query: 243 EELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPELSL 302 E F ++ +EP F FNNP AC TC GLG+ + P+ ++ +P+ S+ Sbjct: 252 EADRFYKGLCSATHHFTYGGIEPEFFMFNNPESACRTCGGLGIYKITHPELLVPDPKRSV 311 Query: 303 AGGAI---------RGWDRRNFYYFQMLKSLADHYKFDVEAPWGSLSANVHKVVLYGSGK 353 GG WD R Y SL+ F ++ PW L A+ +L G + Sbjct: 312 IGGCFVREAFKYNPDTWDGRVMY------SLSKALPFALDTPWEKLPASARHAILNGIDR 365 Query: 354 ENIEFKYMND----RGDTSIRRHPFEGVLHNMERRYKETE-----SSAVREELAKFISNR 404 + I D R D + F G+ +ER Y+ SS + + L K + R Sbjct: 366 K-IPVVMPPDGKVKREDWQGKEVGFGGIARRIERHYRRYRQRGEASSGMEQWLDKVMVER 424 Query: 405 PCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIG 464 C C+G RLR V + + ++ F LK AG+ ++ +EI Sbjct: 425 TCPDCKGARLRATRLLFTVAGKSIHEVGGLNFDELHGFLGELKPAGRGGDAGRQVAREIR 484 Query: 465 DRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDN 524 R++ L+ +GL+YL L+R + TLSGGEAQRIRL++QIG+GL+G++YVLDEPSIGLH +DN Sbjct: 485 GRVELLLGIGLDYLNLNRRSGTLSGGEAQRIRLSTQIGSGLMGMLYVLDEPSIGLHPKDN 544 Query: 525 ERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVP 584 +++ TL LRD+GNTVIVVEHDED IRAADH++++GPG GVHGG VV EG L +MA Sbjct: 545 VKMIATLESLRDIGNTVIVVEHDEDTIRAADHIVEMGPGPGVHGGRVVVEGTLSEVMACK 604 Query: 585 ESLTGQYMSGKRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGS 644 S TGQ++SGKR+I P R N K L + GAR NNLK V +T P+G ITG SGS Sbjct: 605 GSPTGQFLSGKRRIATPSARRAGNG-KTLIVRGARENNLKSVDVTFPLGTLVAITGASGS 663 Query: 645 GKSTLINDTLF-PIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPAT 703 GKSTLIN+ L+ + +R ++ T+ P + I+G EH KV++IDQSPIGR RSNPAT Sbjct: 664 GKSTLINEILYKALWKRLVDTRTL--PGDHDGIEGGEHVHKVVNIDQSPIGRNSRSNPAT 721 Query: 704 YTGVFTPVRELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPC 763 Y G + +R+LF P + RGY GRFSFNV+GGRCE CQG+GVI +++F+PD+ V C Sbjct: 722 YIGFYDTIRDLFTRTPVAMERGYKAGRFSFNVKGGRCEECQGEGVITTQLYFMPDVEVTC 781 Query: 764 DQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRL 823 CKG R+ ETLE +GKTI +VL+M +EE EFF PA+++K++ L D+GL Y+ L Sbjct: 782 AVCKGARFGAETLEATLRGKTITDVLNMPVEEGVEFFANEPAVSKKIEVLNDLGLGYLTL 841 Query: 824 GQSATTLSGGEAQRVKLARELSK-RGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQG 882 GQSATTLSGGEAQR+K+A ELSK + + T+YILDEPTTGLH AD+++LL+ L++L D G Sbjct: 842 GQSATTLSGGEAQRIKIATELSKLQRSKHTVYILDEPTTGLHLADVEKLLECLNRLVDAG 901 Query: 883 NTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLKPML 940 +T++ IEH+LDVIKTAD ++DLGPEGG GGE++ +GTPE +A C+ S+T RFLK L Sbjct: 902 HTVLAIEHHLDVIKTADHVIDLGPEGGHAGGEVVATGTPEKIAACKTSYTGRFLKAHL 959 Score = 131 bits (329), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 78/194 (40%), Positives = 109/194 (56%), Gaps = 16/194 (8%) Query: 406 CASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGD 465 CA C+G R E + + + +M + +EFF N +++KI Sbjct: 781 CAVCKGARFGAETLEATLRGKTITDVLNMPVEEGVEFFAN------EPAVSKKI------ 828 Query: 466 RLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVG--VMYVLDEPSIGLHQRD 523 + L ++GL YLTL +SA TLSGGEAQRI++A+++ +Y+LDEP+ GLH D Sbjct: 829 --EVLNDLGLGYLTLGQSATTLSGGEAQRIKIATELSKLQRSKHTVYILDEPTTGLHLAD 886 Query: 524 NERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAV 583 E+LL L L D G+TV+ +EH D I+ ADHVID+GP G GGEVVA G E I A Sbjct: 887 VEKLLECLNRLVDAGHTVLAIEHHLDVIKTADHVIDLGPEGGHAGGEVVATGTPEKIAAC 946 Query: 584 PESLTGQYMSGKRK 597 S TG+++ K Sbjct: 947 KTSYTGRFLKAHLK 960 >UniRef50_C0ABC8 Excinuclease ABC, A subunit n=1 Tax=Opitutaceae bacterium TAV2 RepID=C0ABC8_9BACT Length = 1013 Score = 842 bits (2174), Expect = 0.0, Method: Compositional matrix adjust. Identities = 466/1004 (46%), Positives = 624/1004 (62%), Gaps = 78/1004 (7%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 63 I ++GAR HNLKN+ L IPR +L+V+TG SGSGKSSLAFDTLYAEG R+Y+ESLS ARQ Sbjct: 8 IHIKGAREHNLKNLELRIPRGRLVVITGPSGSGKSSLAFDTLYAEGYRKYMESLSTQARQ 67 Query: 64 FLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCPDH 123 L +++PDVD I GLSP ++IEQ++ +PRST+ T+TEI DY RLL+A GE RCP Sbjct: 68 VLEQLKRPDVDFIHGLSPVLAIEQRTGGGSPRSTIATVTEIADYARLLWALHGEQRCPKD 127 Query: 124 DVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARIDGEV 183 + +++ V +L G+R+MLLAP IK R + L L +G++R RIDGE+ Sbjct: 128 GGRVVQRSLDDNVARILRDVPGQRIMLLAPAIKARPSVLREELPRLRQRGFLRVRIDGEI 187 Query: 184 CDLSDPPKLEL-QKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVV---ADMDD 239 L DP + ++ ++++VDR +D RLA+S E A ++ ++ D Sbjct: 188 KTLDDPRLIPTGTRELEVDLIVDRLVASEDQRSRLADSLELAFREGRDRVILLAQSNAAD 247 Query: 240 PKAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPE 299 P E L S + AC +CG +L PR FSFN+ GACPTC G+G + F P+ ++ +PE Sbjct: 248 PWTEHHL-SQSLACEVCGDVFEKLTPRHFSFNHSEGACPTCGGIGRKLRFVPEFIVPDPE 306 Query: 300 LSLAGGAIRGW--DRRNFY--YFQMLKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKEN 355 S+ GGAI+ W +N + +LK LA+ +D E PW L + +L+G+G+ Sbjct: 307 KSVRGGAIKPWRIGGKNLIIKHNALLKQLAEQLPYDPETPWKDLPESTRNTILHGAGERL 366 Query: 356 IEFKYMNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGTRLR 415 FK R R PF GV+ ++E ++ET+S R L ++ + C C G RL Sbjct: 367 FAFKLKRMR---EPRAMPFAGVIADLEESFRETDSDGFRARLMTYMISDECPECHGVRLN 423 Query: 416 RE-------------------------------ARHVYVEN-----------TPLPAIS- 432 A+ Y E+ TPLPA Sbjct: 424 ARSSAVTVARASRPHPSPSGAGETPAPRVGASLAKPAYAEDGIKWRARASQATPLPAGET 483 Query: 433 ----------------DMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNVGLN 476 D++ HA+ + L+ A +I+ I RL+FL+ GL Sbjct: 484 PAPLPPPLAITDFFRLDVAAAHALATELSATLSANEA--LREIVTGIEHRLRFLLETGLG 541 Query: 477 YLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRD 536 YLTL R +TLSGGEAQR+RLA+Q+G GL+GV+YVLDEPSIGLH DN +LL TL LRD Sbjct: 542 YLTLDRDYDTLSGGEAQRVRLATQLGMGLMGVIYVLDEPSIGLHPHDNRKLLDTLRELRD 601 Query: 537 LGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVP--ESLTGQYMSG 594 GNTV+VVEHDED +R AD +I++GP AG GG ++ +G A+ A P ++ TG Y++ Sbjct: 602 RGNTVVVVEHDEDTMRIADEIIELGPEAGTEGGRILFQGTPAALSAAPARQTRTGPYLA- 660 Query: 595 KRKIEVPKKRVPANPE-KVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDT 653 RKI + P+ L + AR NNL+ + P GL TC+TGVSGSGKSTL+ND Sbjct: 661 -RKISITNDAGNKPPDGAFLTVREARANNLRGIDARFPAGLLTCVTGVSGSGKSTLVNDI 719 Query: 654 LFPIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRE 713 L A R+LNGAT PAP+R I+ L+ F+K++ +DQSPIGR+PRSNPATYTG+ +R+ Sbjct: 720 LAAAAARKLNGATKIHPAPHRAIEHLDFFEKLVQVDQSPIGRSPRSNPATYTGLLDLLRD 779 Query: 714 LFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNR 773 LFA VP ++ RGY RFSFNVRGGRCE CQGDGVIK++M F+ D Y PC C+G+R+NR Sbjct: 780 LFAQVPLAKVRGYKASRFSFNVRGGRCERCQGDGVIKLDMQFMADAYAPCPSCEGRRFNR 839 Query: 774 ETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGG 833 ETLEI + G++I +VL MT+ +A + F +P + KL TL VGL Y+ LGQSATTLSGG Sbjct: 840 ETLEILFHGQSIADVLAMTVRDAIDLFRNIPRVMDKLATLDAVGLGYLTLGQSATTLSGG 899 Query: 834 EAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLD 893 EAQR+KL+ ELSKR G TLYILDEPTTGLH+ DIQ L+D+L KLRD GNT++VIEHNLD Sbjct: 900 EAQRLKLSLELSKRQQGATLYILDEPTTGLHWVDIQHLMDLLFKLRDAGNTLIVIEHNLD 959 Query: 894 VIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLK 937 VI ADW++DLGP GGS GGE++ +G + + S T + LK Sbjct: 960 VINIADWLIDLGPGGGSAGGELIYAGPRPGIEQEPRSLTGQALK 1003 >UniRef50_B3DYB1 Excinuclease ABC subunit A, ATPase n=4 Tax=Bacteria RepID=B3DYB1_METI4 Length = 947 Score = 829 bits (2142), Expect = 0.0, Method: Compositional matrix adjust. Identities = 445/948 (46%), Positives = 630/948 (66%), Gaps = 20/948 (2%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 63 I ++GA+ HNLKNI+L IP++ V+TG+SGSGKSSLAFDTL+AE QRRY+ESLS Y+RQ Sbjct: 6 ISIKGAKEHNLKNISLRIPKNSFTVITGVSGSGKSSLAFDTLHAEAQRRYMESLSVYSRQ 65 Query: 64 FLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCPDH 123 FL EKP +D +EG+ P+I+IEQK++ +PRSTV T+T I++YL+LLFA +GEP P Sbjct: 66 FLEQFEKPQLDALEGIIPSIAIEQKTSKGSPRSTVATLTNIYEYLKLLFAHLGEPHHPIT 125 Query: 124 DVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARIDGEV 183 L T+ +M +LS +MLLA ++K K + LE + +G++R RI G+V Sbjct: 126 GKKLKRYTIEEMATELLSLAPQSSVMLLASLVKNEKQKLNHLLEQVQKEGFLRVRIAGKV 185 Query: 184 CDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGT--AVVADMDDPK 241 ++ +L ++ ++E+V+DR ++ D+ RL +S E AL + G AVV + D K Sbjct: 186 MEIEQALELPSEEPPSVEIVIDRIRIEPDIKSRLYDSLELALRVGKGVVRAVVQEKDSGK 245 Query: 242 AEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPELS 301 EL+ S P GY +L P+ FS+N+P GACP C GLG + FDP ++ +P + Sbjct: 246 EVELVMSNLHYDPETGYLFEDLSPKHFSYNSPWGACPHCHGLGTELDFDPALIVPDPSVP 305 Query: 302 LAGGAIRGWDRRN----FYYFQMLKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKENIE 357 L W++ + L A Y + W S KV+LYGS NI+ Sbjct: 306 LGENPFAPWEKMGRGLKELLVEELLEQASFYGESFDKSWEDCSEEFKKVILYGSSASNIK 365 Query: 358 FKYMNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGTRLRRE 417 K +G P+EGV+ ++ R +KE+ S+ +R L +F+ PC C+G RL + Sbjct: 366 KK----KGSLP---KPYEGVIPSLRRMFKESSSALIRSRLKEFLFAVPCEVCQGQRLNPD 418 Query: 418 ARHVYVENTPLPAIS-----DMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDRLKFLVN 472 A V +E P ++ ++++ A+ + +L + K A +IL + RL+ LV Sbjct: 419 ALAVTIEIEGWPPMNIAQTMNLTVTEALGWTLSLLSRHKENKGATEILSGLVSRLENLVE 478 Query: 473 VGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLI 532 +GL YL L+R A TLSGGE+QR+RLASQ+ L G++YVLDEPSIGLH RD +L+ + Sbjct: 479 LGLGYLELNRQASTLSGGESQRVRLASQLSGELTGLLYVLDEPSIGLHPRDTAKLVKLIK 538 Query: 533 HLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYM 592 L+ LGNTVIVVEHDE IR AD ++++GPGAG GG VVA G +E ++ ESLTG Y+ Sbjct: 539 KLKQLGNTVIVVEHDEYTIREADTIVELGPGAGPKGGNVVAWGSIEEVLKTKESLTGAYL 598 Query: 593 SGKRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLIND 652 G+R I VP +R +K ++L G R +NLK++ + PVGL +C+TGVSGSGKSTL+ND Sbjct: 599 RGERSIPVPSRRRKPG-KKFIRLYGVREHNLKNIDVAFPVGLLSCVTGVSGSGKSTLVND 657 Query: 653 TLFPIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVR 712 L I +L + EP + I+GL +V+ +DQSPIGR+ RSNPA++ G +R Sbjct: 658 VLAKIFLNRLQDPRV-EPGAFDKIEGLSWIKRVVIVDQSPIGRSMRSNPASFIGALAHIR 716 Query: 713 ELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYN 772 ELFA +P+S+ G++ RFSFN+ GGRCE C+G+GVI++EM FLP +Y C+ C+GKR+N Sbjct: 717 ELFAKLPKSKVLGFSASRFSFNIPGGRCERCKGEGVIELEMAFLPPVYETCEACQGKRFN 776 Query: 773 RETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSG 832 RETLE+ Y+GK I ++L+MTIEE FF +P L KLQ + +VGL Y++LGQ A+TLSG Sbjct: 777 RETLEVTYRGKNIADILEMTIEEGSVFFKNIPPLFEKLQIMEEVGLGYLKLGQPASTLSG 836 Query: 833 GEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNL 892 GEAQR+KLA EL K G TLYILDEPTTGLHFADI+ LL++LH+L D+GNT++VIEHNL Sbjct: 837 GEAQRIKLATELLKGSEGNTLYILDEPTTGLHFADIELLLNLLHRLVDKGNTVIVIEHNL 896 Query: 893 DVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLKPML 940 +V+K+AD+++DLGPEGG+GGG+I+ +GTPE VA+ +AS T ++L+ +L Sbjct: 897 EVVKSADYVIDLGPEGGTGGGKIIAAGTPEEVAKTKASWTGQYLRSLL 944 >UniRef50_C1F8N8 Excinuclease ABC, A subunit n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F8N8_ACIC5 Length = 994 Score = 823 bits (2127), Expect = 0.0, Method: Compositional matrix adjust. Identities = 459/995 (46%), Positives = 605/995 (60%), Gaps = 76/995 (7%) Query: 2 DKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYA 61 D+I +RGARTHNLKNI+ IP +L VVTG+SGSGKSSLAFDT+YAEGQRRYVESLSAYA Sbjct: 3 DQIVIRGARTHNLKNIDCTIPHGQLTVVTGVSGSGKSSLAFDTVYAEGQRRYVESLSAYA 62 Query: 62 RQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCP 121 RQFL MEKPDVD I+GL+PA++I+QK+T+ NPRSTV T TEI+DYLRLL+AR G C Sbjct: 63 RQFLERMEKPDVDFIDGLAPAVAIKQKNTTRNPRSTVATATEIYDYLRLLYARCGTVHCI 122 Query: 122 DHDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHT------------------ 163 D + +V ++ VL+ EG RL L P+ ++ Sbjct: 123 VCDGIVKRDSVDEIAAAVLALGEGTRLYALFPVTPAQQAPEAGPESPAAEEAKPPKRPRK 182 Query: 164 -------------------KTLENLASQGYIRARIDGEVCDLSDPPKL-ELQKKHTIEVV 203 + L L +G+ R G + + S P L E+ + V+ Sbjct: 183 TAKKAAAAPAASTLTESLKERLAELRKRGFNRLYQGGNIYEFSTPESLLEIDFTLPVFVL 242 Query: 204 VDRFKVRDDLTQRLAESFETALELSGGT---AVVADMDDPKAEELLFSANFACPICGYSM 260 +DR V + R+ ++ E +G V + + P+ E L FS F C C Sbjct: 243 IDRLVVSPENRARIVDAAEIGYREAGEILYEIVPREGEKPERERLRFSGAFECKTCHRVY 302 Query: 261 RELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPELSLAGGAIRGWDRRNFY-YFQ 319 RE EPRLFSFNNP GACP C G G FD +I + +L GAI W+R + ++ Sbjct: 303 REPEPRLFSFNNPFGACPRCQGFGNTIDFDLALIIPDSAKTLTAGAIDPWNRPKYRPWYA 362 Query: 320 MLKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKENIEFKYMNDRGDTSIRRHPFEGVLH 379 ++ A ++ PW LS +L G G F GV Sbjct: 363 DMRRAAQAQGVPLDVPWRELSEEHQSFILNGQGS--------------------FAGVRG 402 Query: 380 NMERRYKETESSAVREELAKFISNRPCASCEGTRLRREARHVYVENTPLPAISDMSIGHA 439 E+ ++ VR L+K+ C C+G RLR EAR V + + S ++I +A Sbjct: 403 FFEQMERKKYKLHVRVMLSKYRGYAVCPECKGQRLRAEARAVRISGKNICEASALTIRNA 462 Query: 440 MEFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLAS 499 EFF L L + +IA IL E+ RL FL VGL+YLTL R A TLSGGEAQRI+LA+ Sbjct: 463 NEFFGALTLTAMQQEIAGSILDEVRQRLHFLDAVGLDYLTLDRLASTLSGGEAQRIQLAT 522 Query: 500 QIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVID 559 +G+ LVG +YVLDEPSIGLH RD +L+ L +LRDLGNT++VVEHD D IRAAD++ID Sbjct: 523 SLGSRLVGALYVLDEPSIGLHTRDTAKLIRILENLRDLGNTILVVEHDPDVIRAADYLID 582 Query: 560 IGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEVPKKRVPA---NPEKVLKLT 616 +GPGAG GG+++A G ++ + A SLTG+Y+SG I VP+ R N + L+L Sbjct: 583 LGPGAGEFGGKLLAAGTVQQVEANTSSLTGKYLSGTVTIPVPRFRREIDVDNKRQWLRLE 642 Query: 617 GARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAEPAP-YRD 675 GAR NNLK + + +P+ + TCITGVSGSGKSTL+++ L+ + L +P+ YR Sbjct: 643 GARANNLKGIDVQIPLQVLTCITGVSGSGKSTLVHEVLYKVLAYHLGKTETGDPSHLYRA 702 Query: 676 IQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESRARGYTPGRFSFNV 735 + G E + ++ +DQ+PIGRTPRSNP TY F +RELFA PE++ RGY+ G FSFNV Sbjct: 703 VHGAERLNDIVLVDQTPIGRTPRSNPVTYIKAFDAIRELFASQPEAQRRGYSAGYFSFNV 762 Query: 736 RGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEE 795 GGRC+ C+GDG + VEM FL D+ +PC++C G RY LEIKYKGK+IH+VL MT++E Sbjct: 763 PGGRCDVCEGDGTVTVEMQFLADVELPCEECSGSRYKASVLEIKYKGKSIHDVLGMTVKE 822 Query: 796 AREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLAREL----------S 845 A FF P + KL L ++GL Y+RLGQSATTLSGGEAQRVKLA L + Sbjct: 823 ALRFFAGHPKIVDKLAVLEEIGLGYLRLGQSATTLSGGEAQRVKLALHLASVRSSGSSEA 882 Query: 846 KRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADWIVDLG 905 ++ + LYILDEPTTGLHF D+ +LL KL D G ++VVIEHNLD+IK+ADWI+DLG Sbjct: 883 RKAANRILYILDEPTTGLHFEDVSKLLMAFKKLIDGGASLVVIEHNLDIIKSADWIIDLG 942 Query: 906 PEGGSGGGEILVSGTPETVAECEASHTARFLKPML 940 PEGG+GGG+I+ +GTPE + E SHT +L +L Sbjct: 943 PEGGTGGGQIVATGTPEEITRHELSHTGYWLARVL 977 >UniRef50_B8I0Z8 Excinuclease ABC, A subunit n=1 Tax=Clostridium cellulolyticum H10 RepID=B8I0Z8_CLOCE Length = 993 Score = 816 bits (2108), Expect = 0.0, Method: Compositional matrix adjust. Identities = 418/956 (43%), Positives = 614/956 (64%), Gaps = 32/956 (3%) Query: 3 KIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYAR 62 +I V GA HNLKNIN+ +P++KLIV TG+SGSGKS+L FDT+YAE QRR+V+ LS+ ++ Sbjct: 32 EIVVEGACHHNLKNINITLPKNKLIVFTGVSGSGKSTLVFDTIYAEAQRRFVDGLSSTSK 91 Query: 63 QFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCPD 122 + + KP VD I GLSPAI+I+QKS +NPRSTVGT+TEI DYLR+L+ ++G P C + Sbjct: 92 RHFEKVGKPSVDKIYGLSPAIAIQQKSLGNNPRSTVGTLTEISDYLRILYEKIGIPYCLN 151 Query: 123 HDVPLAAQTVSQMVDNVLSQ-PEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARIDG 181 P+ QT ++ +++ + G+ ++ AP++ ++ + ++ L G+ + R+D Sbjct: 152 CGTPIYKQTPREIAESICKKFSAGESFIIYAPLLTQKTNDINSSIRELFQGGFRKLRLDS 211 Query: 182 EVCDLSDPPKLELQKKHTIEVVVDRFKVRD--------DLTQRLAESFETALELSGGTAV 233 + D+++ ++ +I+V+ F + + + R+ L + GT Sbjct: 212 NIIDITEETRISQTGNLSIDVISKEFFLPNVLGKENNTEFIDRVTAEIRNLLLYTKGTLE 271 Query: 234 VADMDDPKAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDR 293 + + L +SA C C E+ + FS+N P G CP C GLGV+Q P Sbjct: 272 IVS---NSGKILYYSAEQICARCHTVFPEITIQHFSYNTPIGMCPDCRGLGVEQEISPLL 328 Query: 294 VIQNPELSLAGGAIRGWD-----RRNFYYFQMLKSLADHYKFDVEAPWGSLSANVHKVVL 348 +I + +S+ GA++ + +++ + L L +HY D+E PW L ++L Sbjct: 329 LIDDENVSILDGALKWFGNLRDGKKSTWPTGPLDILFEHYNLDIETPWSKLPEWFRNIIL 388 Query: 349 YGSGKENIEFKYMNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCAS 408 YGSG+E ++++ D +G++ + R Y +T+S R++ ++ ++PC + Sbjct: 389 YGSGEEKLKYRSAQGMKDN---YKAVKGLVPELTRLYYDTDSEHTRKKYGDYMVSKPCKA 445 Query: 409 CEGTRLRREARHVYVENTPLPAISDMSIGHAM----EFFNNLKLAGQRAKIAEKILKEIG 464 C+GTRL EAR + V N + ++ +SI AM E +N+L + ++++++L EI Sbjct: 446 CKGTRLCPEARSIKVGNLTISEVNALSIDDAMKWILEIYNSLD--NKTWELSKELLMEIY 503 Query: 465 DRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDN 524 +RL LV+VGLNYL+L+R+A TLSGGE QR+RLA Q+ +G+V V+YVLDEPS GLH +D Sbjct: 504 NRLSLLVDVGLNYLSLNRTAPTLSGGEGQRVRLACQLNSGIVDVLYVLDEPSTGLHPKDT 563 Query: 525 ERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVP 584 ++L+ T+ LRDLGNTV+VVEH++D ++ AD ++DIGP AG GG V+AEG + ++A Sbjct: 564 KKLIQTMQRLRDLGNTVLVVEHEQDIMKNADWLVDIGPKAGNGGGYVMAEGTPDVVLADN 623 Query: 585 ESLTGQYMSGKRKIEVPKKRVPA---NPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGV 641 SLT QY+ GK K+ + KRVP N K L L G + NNLK+VT +P+G TCITGV Sbjct: 624 NSLTAQYLCGKLKVGL--KRVPKDVRNQGKWLILKGVKYNNLKNVTARIPIGSLTCITGV 681 Query: 642 SGSGKSTLINDTLFPIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNP 701 SGSGKS+LI L P+ R++NG + Y + G E+ DK++++ QSPIGR P SNP Sbjct: 682 SGSGKSSLIGGVLEPLLNRRINGG-LDPVGKYESLTGDEYLDKLVNVSQSPIGRRPTSNP 740 Query: 702 ATYTGVFTPVRELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYV 761 ATYTG+F +R++FA ++ +G+ FSFN GRCE C+G G IK+EMHFLPD+++ Sbjct: 741 ATYTGLFDKIRKVFANTEYAKEKGFNSEYFSFNSNKGRCEICEGQGQIKIEMHFLPDVWI 800 Query: 762 PCDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYI 821 PC +C GKR+ + L+ K+K K I EVL+M +E+A FF + LQTL DVGL YI Sbjct: 801 PCTECGGKRFKADILKAKFKDKDISEVLEMDVEKALSFFIGYKDIVGILQTLKDVGLDYI 860 Query: 822 RLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQ 881 +LGQSATTLSGGEAQRVKLA+ELS + G +YILDEPTTGLHF DIQ LL V +L D Sbjct: 861 KLGQSATTLSGGEAQRVKLAKELSTKVKGSMIYILDEPTTGLHFNDIQHLLKVFQRLVDI 920 Query: 882 GNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLK 937 G+T+VVIEH+L++IK ADW++DLGPEGG+ GGEI+ GT E + S+T + LK Sbjct: 921 GHTLVVIEHDLNIIKMADWVIDLGPEGGADGGEIIAQGTVEDILNNPNSYTGQALK 976 Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 41/117 (35%), Positives = 60/117 (51%), Gaps = 8/117 (6%) Query: 611 KVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAEP 670 K + + GA +NLK++ +TLP TGVSGSGKSTL+ DT++ AQR+ + Sbjct: 31 KEIVVEGACHHNLKNINITLPKNKLIVFTGVSGSGKSTLVFDTIYAEAQRRFVDGLSSTS 90 Query: 671 APYRDIQGLEHFDKV------IDIDQSPIGRTPRSNPATYTGVFTPVRELF--AGVP 719 + + G DK+ I I Q +G PRS T T + +R L+ G+P Sbjct: 91 KRHFEKVGKPSVDKIYGLSPAIAIQQKSLGNNPRSTVGTLTEISDYLRILYEKIGIP 147 >UniRef50_B3QT58 Excinuclease ABC, A subunit n=23 Tax=Bacteroidetes/Chlorobi group RepID=B3QT58_CHLT3 Length = 980 Score = 815 bits (2104), Expect = 0.0, Method: Compositional matrix adjust. Identities = 449/951 (47%), Positives = 618/951 (64%), Gaps = 41/951 (4%) Query: 6 VRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQFL 65 ++GARTHNLKNI++ IPR+KL+V++G+SGSGKSSLAFDTLYAEG RRYVES+S+Y RQFL Sbjct: 54 IKGARTHNLKNIDVAIPRNKLVVISGVSGSGKSSLAFDTLYAEGHRRYVESMSSYIRQFL 113 Query: 66 SLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCPDHDV 125 + KPDVD I+G++PAI+IEQK+TS NPRSTVGT+TEI+DYLRLLFAR+G+ D + Sbjct: 114 ERIPKPDVDFIQGIAPAIAIEQKTTSKNPRSTVGTVTEIYDYLRLLFARIGKTYSKDTNE 173 Query: 126 PLAAQTVSQMVDNVLSQPEGKRLMLLAP-----IIKERKGEHTKTLENLASQGYIRARID 180 + T ++ V E + + P + K+++ + L+NL +G+ R Sbjct: 174 LVLKHTPEDVLFQVKLFEERTKFYIGFPFPHHKLAKKKERSFSDELQNLKQKGFTRIVKG 233 Query: 181 GEVCDLS---DPPKL-ELQKKHTIEVVV--DRFKVRDD--LTQRLAESFETALELSGGTA 232 + DLS D KL +L K E++V DR R+D L R+ E+ ET SGG A Sbjct: 234 ETIFDLSSEQDENKLTKLNKSEQSELLVLTDRLAYREDEELFHRVTEAVETCFRESGGYA 293 Query: 233 VVADMDDPKAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPD 292 V + + FS + G E P+LF+FN+P GACPTC G G D D Sbjct: 294 TVRVLG---GRDYQFSDKLE--LNGIEYEEPTPQLFAFNSPVGACPTCQGFGRIPGVDED 348 Query: 293 RVIQNPELSLAGGAIRGWDR-RNFYYFQMLKSLADHYKFDVEAPWGSLSANVHKVVLYGS 351 V+ N LS+ GAI W+ ++ + + L +A +K ++ P+GSLS N K++ G+ Sbjct: 349 AVVPNKALSIRDGAIACWNSDKHSRHLRDLIRVASEHKIPLDEPYGSLSENAKKIIWQGA 408 Query: 352 GKENIEFKYMNDRGDTSIRRHPFEGVLHNMER--RYKETESSAVREELAKFISNRPCASC 409 +N +F + +G +ER +YK R L+++ C C Sbjct: 409 --KNSDFLGV-------------KGFFKEIEREAQYK----MHYRVLLSRYRGYTVCPDC 449 Query: 410 EGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDRLKF 469 +GTRLR++A V V L I +M+IG A +FF N++++ +A IL+EI RL + Sbjct: 450 QGTRLRKDALQVRVAKMTLADIVEMTIGEAYQFFKNIEISRFDKAVASTILEEILRRLSY 509 Query: 470 LVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLG 529 LV VGL+YLTLSR ++TLSGGE+QRI LA+ +G+ LVG +Y+LDEPSIGLHQRD+ RL+ Sbjct: 510 LVEVGLDYLTLSRPSQTLSGGESQRINLATSLGSSLVGSLYILDEPSIGLHQRDSARLIR 569 Query: 530 TLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTG 589 L LRD+GNTVIVVEHD + I AAD ++D+GP AG HGGE++ G E I+ S+TG Sbjct: 570 ILRKLRDIGNTVIVVEHDREIIEAADIILDLGPKAGRHGGELIFHGTYEDILQSASSVTG 629 Query: 590 QYMSGKRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTL 649 +Y++GK I +P+KR + + +++ GA NNLK++ + P+G+ TC+TGVSGSGKSTL Sbjct: 630 KYLTGKNIIPLPEKRREPDFSRAIEVQGAMENNLKNLDVKFPLGVMTCVTGVSGSGKSTL 689 Query: 650 INDTLFPIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFT 709 + D L+ +Q G T + ++ + G E K+ +DQSPIGRT RSNPATY +F Sbjct: 690 VTDILYLGLLKQKVG-TAEKVGTHKALLGGEQISKIELVDQSPIGRTSRSNPATYLKIFD 748 Query: 710 PVRELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGK 769 +R +FA ++A+G+ PG FSFN+ GGRCE C G+GVI +EM FL DI C+ C G+ Sbjct: 749 EIRSIFAHTTYAKAKGWEPGYFSFNIPGGRCETCAGEGVIHIEMQFLADIETVCEDCHGR 808 Query: 770 RYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATT 829 RY ETL Y GK+I +VLDMT+ EA EFF AL+RKL L DVGL Y++LGQSA+T Sbjct: 809 RYKAETLSALYNGKSIADVLDMTVTEAIEFFQDHRALSRKLSILEDVGLGYLQLGQSAST 868 Query: 830 LSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIE 889 LSGGEAQR+KLA +S + L+I DEPTTGLHF DIQ+L+ ++L QGNT+++IE Sbjct: 869 LSGGEAQRLKLALHISSIESRNALFIFDEPTTGLHFDDIQKLIQCFNQLLAQGNTLIIIE 928 Query: 890 HNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLKPML 940 HNLDVIK ADWI+DLGP+ G+ GGEI+ +G PE++A EAS T ++LK L Sbjct: 929 HNLDVIKQADWIIDLGPDAGNRGGEIVAAGVPESIAAAEASFTGKYLKEYL 979 Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 36/110 (32%), Positives = 55/110 (50%), Gaps = 7/110 (6%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 63 IEV+GA +NLKN+++ P + VTG+SGSGKS+L D LY ++ V + Sbjct: 653 IEVQGAMENNLKNLDVKFPLGVMTCVTGVSGSGKSTLVTDILYLGLLKQKVGTAEKVGTH 712 Query: 64 FLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFA 113 +L+ + IE ++Q RS T +I D +R +FA Sbjct: 713 -KALLGGEQISKIE------LVDQSPIGRTSRSNPATYLKIFDEIRSIFA 755 >UniRef50_Q1PVF8 Strongly similar to exinuclease ABC, protein A n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1PVF8_9BACT Length = 941 Score = 810 bits (2093), Expect = 0.0, Method: Compositional matrix adjust. Identities = 419/955 (43%), Positives = 599/955 (62%), Gaps = 45/955 (4%) Query: 8 GARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQFLSL 67 G R HNLKNI++ IP +KL+V+TG+SGSGKSSLAFDTL+AEGQRRYVES SAYARQFL Sbjct: 9 GIRVHNLKNIDVEIPHNKLVVITGVSGSGKSSLAFDTLFAEGQRRYVESFSAYARQFLEK 68 Query: 68 MEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCPDHDVPL 127 M+KPDVDHIEG+ PAI+I+QK+ N RSTVGT TEI+DYLRLL+AR+G+ C + Sbjct: 69 MDKPDVDHIEGILPAIAIQQKNPVKNRRSTVGTATEINDYLRLLYARIGKTYCKSCKRQV 128 Query: 128 AAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARIDGEVCDLS 187 TVS +V+ +LS PEG + ++ P+ +K + + L +G +R D ++ D++ Sbjct: 129 RIDTVSHIVEFILSLPEGTKFLVTFPLNISQKISGEEQINLLKERGIVRILADNDIVDIT 188 Query: 188 DPPK-LELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVADMDD------- 239 + +++ T+ ++DR V+ + RL +S ET+ + G + +D Sbjct: 189 NEQNSFDIRAAKTVYGIIDRLVVKYTIKDRLIDSLETSYRMGSGHLSIFYTNDALSSEAI 248 Query: 240 -PKAEELL-----------FSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQ 287 P ++L+ +S F C C E P LFSFNNP GACP C G G Sbjct: 249 KPSTDDLVRIQDSPWVEMKYSKKFFCSYCAIEYPEPSPALFSFNNPIGACPKCQGFGHTI 308 Query: 288 YFDPDRVIQNPELSLAGGAIRGWDRRNFY-YFQMLKSLADHYKFDVEAPWGSLSANVHKV 346 D D VI + E SL GAI W+ + ++ L+S A Y ++ P+ L+ Sbjct: 309 DIDMDAVIPDKEKSLEQGAIVPWNTPAYRELYEELESAASKYDIPMDVPFRKLTKK---- 364 Query: 347 VLYGSGKENIEFKYMNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPC 406 + N+ F+ D + + EG R+YK VR L+K+ C Sbjct: 365 ------QLNLLFEGTKDFCGINEFFNWLEG------RKYK----IHVRVILSKYRGYNVC 408 Query: 407 ASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDR 466 +CEGTRL++EA + ++ + + M+I A FF L+L+ IA IL+EI R Sbjct: 409 RTCEGTRLKKEALTIVIQQRSIAEVCTMTIEQAHMFFQKLQLSDYERNIAHLILQEITKR 468 Query: 467 LKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNER 526 L +++ VGL YLTL R TLSGGEAQR+ L + +G+ LV +Y+LDEPS+GLH RD +R Sbjct: 469 LGYMIKVGLGYLTLDRMTRTLSGGEAQRVNLTTSLGSSLVNTLYILDEPSVGLHPRDTDR 528 Query: 527 LLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPES 586 L+ L LRD+GNTV+VVEHD + I+ +D +ID+GPGAG +GG +V G + A S Sbjct: 529 LIHILTRLRDIGNTVVVVEHDAEVIKNSDMIIDLGPGAGENGGRLVYHGTFAQLPANNCS 588 Query: 587 LTGQYMSGKRKIEVPK-KRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSG 645 LTGQY+ G++ I++P +R P+ VLK GA NNLK++ +T P+ + C+TGVSGSG Sbjct: 589 LTGQYLKGEKAIKIPSSRRKPSRKAIVLK--GASQNNLKNIDVTFPLNMLVCVTGVSGSG 646 Query: 646 KSTLINDTLFPIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYT 705 KSTL+ DTL+ +++L G + I+G + ++ +DQSPIGRTPRSNP TY Sbjct: 647 KSTLVQDTLYGALKKKL-GIYSGFVGKHTAIEGERFINDILLVDQSPIGRTPRSNPVTYI 705 Query: 706 GVFTPVRELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQ 765 +F +R+LFA E++AR T G FSFN+ GGRCE C+G G +KV+M FL DI+V C++ Sbjct: 706 KIFDEIRKLFAFTREAKARKLTIGSFSFNIAGGRCEFCEGAGYVKVDMQFLADIFVTCEK 765 Query: 766 CKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQ 825 C GKR+N++ LE+KYK K IHEVL +T++EA EFF + + L+ L + GL Y++LGQ Sbjct: 766 CGGKRFNKKVLEVKYKNKNIHEVLSITVDEAIEFFRESVNITKVLKCLQETGLGYLKLGQ 825 Query: 826 SATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTI 885 ATTLSGGEAQR+K++ +S+ L++ DEPT GLH DIQ+LL+ +L G+++ Sbjct: 826 PATTLSGGEAQRLKVSTYISQENMESMLFVFDEPTIGLHMDDIQKLLNCFQRLLQAGHSL 885 Query: 886 VVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLKPML 940 +V+EHNLD+IK++D+I+DLGPEGG+ GG ++ GTPE +++ + SHT +LKP Sbjct: 886 IVVEHNLDIIKSSDYIIDLGPEGGNEGGYVIGCGTPEKISKIKTSHTGAYLKPYF 940 Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 38/116 (32%), Positives = 64/116 (55%), Gaps = 7/116 (6%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 63 I ++GA +NLKNI++ P + L+ VTG+SGSGKS+L DTLY +++ + S + + Sbjct: 614 IVLKGASQNNLKNIDVTFPLNMLVCVTGVSGSGKSTLVQDTLYGALKKK-LGIYSGFVGK 672 Query: 64 FLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPR 119 ++ + ++ I + ++Q PRS T +I D +R LFA E + Sbjct: 673 HTAIEGERFINDI------LLVDQSPIGRTPRSNPVTYIKIFDEIRKLFAFTREAK 722 >UniRef50_Q2S5D7 Excinuclease ABC, A subunit n=3 Tax=Bacteria RepID=Q2S5D7_SALRD Length = 981 Score = 796 bits (2056), Expect = 0.0, Method: Compositional matrix adjust. Identities = 444/981 (45%), Positives = 605/981 (61%), Gaps = 68/981 (6%) Query: 2 DKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYA 61 D I +RGAR HNLK+I+L +PR++LIV TG SGSGKSSL FDT+YAEGQRRYVESLSAYA Sbjct: 27 DHIVIRGARQHNLKDIDLDLPRNELIVFTGPSGSGKSSLCFDTIYAEGQRRYVESLSAYA 86 Query: 62 RQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCP 121 RQFL M+KP+ D I GL+PAI+IEQK++ NPRSTV T TEI+D+LRLLFAR+G P Sbjct: 87 RQFLERMDKPEADLITGLAPAIAIEQKTSGKNPRSTVATQTEIYDHLRLLFARIGTTYSP 146 Query: 122 DHDVPLAAQTVSQMVDNVLSQPE-GKRLMLLAPIIKERKGEHTKTLENLASQGYIRA-RI 179 P++ T + D + + G R L API + L +L +G+ R R+ Sbjct: 147 VSGEPVSRDTPHDVADRLDDALDDGTRFYLCAPIPEHADMALRDQLTSLRERGFYRILRL 206 Query: 180 ----------DGEVCDLSD--PPKLELQKKHTIEVVVDRFKVRD---DLTQRLAESFETA 224 + E+ DL+ P + + + V++DR KV+ D R+AES E A Sbjct: 207 PTERQAEQGQEPEILDLNQEAPSSVNHYGRARLRVLIDRLKVKTGDADTRSRIAESVEQA 266 Query: 225 LELSGGTAVVA--------DMDDPKAEE-------LLFSANFACPICGYSMRELEPRLFS 269 + G V + P A + FSA+F G E P+LFS Sbjct: 267 FDEGDGYCTVIPAPRGGYDETAHPDASQHQGPIPLFEFSAHFERD--GMRFEEPTPQLFS 324 Query: 270 FNNPAGACPTCDGLGVQQYFDPDRVIQNPELSLAGGAI---RG--WDRRNFYYFQMLKSL 324 FN+P GACPTC G G D D ++ N +LS+ GA+ RG W + +F+ L ++ Sbjct: 325 FNSPVGACPTCQGFGRVPGLDEDLIVPNKQLSIRDGALAPFRGDKWGK----HFKDLIAV 380 Query: 325 ADHYKFDVEAPWGSLSANVHKVVLYGSGKENIEFKYMNDRGDTSIRRHPFEGVLHNMERR 384 A D++ P+ L+ ++V G D I H F L E Sbjct: 381 AADVGLDIDCPYHELADWEEEIVWEGK--------------DDYIGLHGFFEFLE--ENS 424 Query: 385 YKETESSAVREELAKFISNRPCASCEGTRLRREARHV-----YVENTPLPAISDMSIGHA 439 YK R A+F C C G RL +A +V VE + I M+ A Sbjct: 425 YKR----HYRIFRARFRGYSECPDCSGHRLCDDALYVKVGGDAVEQKHIGEICAMTTRAA 480 Query: 440 MEFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLAS 499 ++F L L ++A ++++E+ +R ++LV+VGL+YLTL R A+TLSGGE QRI L++ Sbjct: 481 RDYFEALALTDYEQEVAGRVMEELRERSRYLVDVGLDYLTLDRLAQTLSGGETQRINLST 540 Query: 500 QIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVID 559 +G+ LVG +YVLDEP++GLH RDNERL+ L LRDLGNTV+VVEHD + AAD ++D Sbjct: 541 SLGSSLVGSLYVLDEPTVGLHPRDNERLIDILQRLRDLGNTVLVVEHDPVTMEAADQLVD 600 Query: 560 IGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEVPKKRVPANPEKVLKLTGAR 619 +GP +G GGEVV +GP + I+ +SLTGQY+SG++++ VP +R PA+P+ L + AR Sbjct: 601 LGPASGAFGGEVVFQGPYDEILEAEDSLTGQYLSGRKEVPVPDERRPADPDDTLVIENAR 660 Query: 620 GNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAEPAPYRDIQGL 679 +NLK V + +P+G C+TGVSGSGKSTL N TLF R G+ + + I+G Sbjct: 661 QHNLKHVDVEIPLGQIVCVTGVSGSGKSTLTNQTLFEGLHRLKGGSGDGKVGAHDTIRGH 720 Query: 680 EHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESRARGYTPGRFSFNVRGGR 739 E+ D V +DQS IGR+PRSNPATYT F +R+LFA +S+ GY G FSFN +GGR Sbjct: 721 ENVDAVEMVDQSSIGRSPRSNPATYTNAFDGIRKLFAQARQSQVHGYDRGTFSFNTKGGR 780 Query: 740 CEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREF 799 CE C+G GV+KVEM FL D+Y+ C+ C G+RY +E L + Y GK I +VLDMT++EA +F Sbjct: 781 CEECEGQGVVKVEMQFLADLYLECEACNGQRYKKEVLNVTYNGKNIADVLDMTVDEAADF 840 Query: 800 FDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEP 859 F+ A+ KL+ L D+GL Y+ LGQ +TTLSGGEAQR+KLA LS R + +TLYI DEP Sbjct: 841 FEGERAIINKLEVLQDIGLGYLTLGQPSTTLSGGEAQRIKLASHLSGRASDRTLYIFDEP 900 Query: 860 TTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSG 919 TTGLHF DI++LL +L + +++++IEHNLDV+K AD ++DLGPEGG GG ++ +G Sbjct: 901 TTGLHFDDIRKLLGAFEQLVENSHSVLIIEHNLDVVKYADHVIDLGPEGGDAGGNVVATG 960 Query: 920 TPETVAECEASHTARFLKPML 940 TPE VA C+ SHT RFL+ +L Sbjct: 961 TPEEVAACDESHTGRFLRDVL 981 >UniRef50_C1A9P0 UvrABC system protein A n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A9P0_GEMAT Length = 958 Score = 793 bits (2049), Expect = 0.0, Method: Compositional matrix adjust. Identities = 452/970 (46%), Positives = 608/970 (62%), Gaps = 53/970 (5%) Query: 2 DKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYA 61 D I +RGAR HNLK +L IPR + VVTG+SGSGKSSLAFDTLYAEGQRRYVESLSAYA Sbjct: 3 DTIRIRGARQHNLKGFDLDIPRRAITVVTGVSGSGKSSLAFDTLYAEGQRRYVESLSAYA 62 Query: 62 RQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCP 121 RQFL MEKP VD IEG+SPA++IEQK+ + RSTVGT TEI+DYLRLL+ARVG CP Sbjct: 63 RQFLERMEKPAVDSIEGISPAVAIEQKNPTRTSRSTVGTATEIYDYLRLLWARVGRTYCP 122 Query: 122 DHDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARIDG 181 L TV + D VL+ PEG R ++ P+++ K H ENL ++G++R + Sbjct: 123 KCGRELRPDTVQSVTDAVLALPEGTRFLVACPLVRSSKVSHAVIAENLRARGFVRVAVPA 182 Query: 182 ----EVCDLSDPPK--LELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVA 235 EV L D + L L + + +VVDR +V R+A++ +TA G A + Sbjct: 183 THGVEVLHLDDVTEETLNLATRENVSIVVDRLRVEPSARGRIADAVQTAFTEGDGDARIL 242 Query: 236 DMD-----DPKAE-----------ELLFSANFACPICGYSMRELEPRLFSFNNPAGACPT 279 + + AE +L F+ F CP G P+LFSFNNP GACPT Sbjct: 243 LTEAIVPPESIAERVGAAPGNAVWQLAFTERFECPNDGTRAPSPTPQLFSFNNPRGACPT 302 Query: 280 CDGLGVQQYFDPDRVIQNPELSLAGGAIRGWDRRNF-YYFQMLKSLADHYKFDVEAPWGS 338 C+G G +D ++ +PE SL GAI W + +++ A + PW + Sbjct: 303 CNGFGATLDYDLALIVPHPERSLRDGAIDPWTAPRYEKQRRLVVDFARTLGVSADVPWST 362 Query: 339 LSANVHKVVLYGSGKENIEFKYMNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELA 398 L A + +L R T I PF L E++YK+ +R L Sbjct: 363 LPAEAQQKLL-----------RTTSRAYTGIL--PFLEALE--EKKYKQY----IRIFLR 403 Query: 399 KFISNRPCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEK 458 ++ S RPC C GT+L+ EA V V+ + ++ + + + L L+G A IA+ Sbjct: 404 QYQSARPCRDCGGTKLQPEALQVRVDGRTIAEVAQWPVRDLRTWIDALTLSGSDAVIADA 463 Query: 459 ILKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIG 518 +L+E R +FL +VGL YLTL R+ TLSGGEAQRI L++ +GA LV YVLDEPSIG Sbjct: 464 VLREARARTRFLTDVGLTYLTLDRATRTLSGGEAQRITLSNALGAALVDATYVLDEPSIG 523 Query: 519 LHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLE 578 LH RD +RLL L LRDLGNTV++VEHD +A+R AD+++++GP AG HGG+VV GP+ Sbjct: 524 LHSRDLDRLLSLLTRLRDLGNTVVMVEHDLEAMRIADYMVEMGPAAGEHGGQVVFAGPMA 583 Query: 579 AIMAVPESLTGQYMSGKRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCI 638 + P LTGQY++G R+IEVP KR P P + L+L GAR +N+ V L +P+G T + Sbjct: 584 DVEQSP--LTGQYLTGARRIEVPTKRRPVGP-RWLELKGARAHNVHGVDLRIPLGAMTVV 640 Query: 639 TGVSGSGKSTLINDTLFPIAQRQLNGATIAEP------APYRDIQGLEHFDKVIDIDQSP 692 TGVSGSGKST+++D LF + +L+G A+ Y + G EH D V+ +DQSP Sbjct: 641 TGVSGSGKSTMVHDVLFHALESRLHGEHSAKEHLGETVGGYTSLTGFEHLDDVVLVDQSP 700 Query: 693 IGRTPRSNPATYTGVFTPVRELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVE 752 IG++PRSNP TY F VR LFA P S+ +G+ G FSFNV GGRC+ C+G G I+VE Sbjct: 701 IGKSPRSNPVTYVKAFDEVRRLFAESPLSKTKGFAAGHFSFNVAGGRCDHCEGAGAIEVE 760 Query: 753 MHFLPDIYVPCDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQT 812 M F+ D++VPCD C GKR+ E LE++ +GK I +VL++T++EA FF LA+ L Sbjct: 761 MVFMADVFVPCDACGGKRFKPEVLEVRVRGKNIADVLELTVDEAIRFFPREDKLAQALWH 820 Query: 813 LMDVGLTYIRLGQSATTLSGGEAQRVKLARE--LSKRGTGQTLYILDEPTTGLHFADIQQ 870 + VGL Y+RLGQ ATTLSGGEAQR+K+ARE L+ RG + LY++DEPTTGLH DI++ Sbjct: 821 VQQVGLGYLRLGQPATTLSGGEAQRLKIARELALTARGAARKLYVMDEPTTGLHLEDIRR 880 Query: 871 LLDVLHKLRDQGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEAS 930 L V +L QG+T+++IEH+LDVIK ADWIVD+GP+GG GGG+++ G PE + + AS Sbjct: 881 LAQVFERLLSQGHTLLLIEHHLDVIKLADWIVDMGPDGGDGGGQVVAMGRPEEIVQVAAS 940 Query: 931 HTARFLKPML 940 HT R+L+ +L Sbjct: 941 HTGRWLRTVL 950 >UniRef50_B1ZMZ6 Excinuclease ABC, A subunit n=1 Tax=Opitutus terrae PB90-1 RepID=B1ZMZ6_OPITP Length = 999 Score = 793 bits (2047), Expect = 0.0, Method: Compositional matrix adjust. Identities = 449/988 (45%), Positives = 597/988 (60%), Gaps = 93/988 (9%) Query: 27 IVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQFLSLMEKPDVDHIEGLSPAISIE 86 +V+TG SGSGKSSLAFDTLYAEG R+Y+ESLS ARQ L + +PDVD I GLSP ++IE Sbjct: 1 MVITGPSGSGKSSLAFDTLYAEGYRKYMESLSTQARQVLEQLRRPDVDFIHGLSPVLAIE 60 Query: 87 QKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCPDHDVPLAAQTVSQMVDNVLSQPEGK 146 Q++ S PRST+ T TE+ DY +LL+A GE RCP + +++ V VL++ G+ Sbjct: 61 QRTGSGGPRSTIATATELADYAQLLWALCGEQRCPKDGGRVVQRSLDGNVQRVLTECAGE 120 Query: 147 RLMLLAPIIKERKGEHTKTLENLASQGYIRARIDGEVCDLSDP---PKLELQKKHTIEVV 203 R+MLLAP ++ + + L L +G+ R R+DGEV +L +P P K T+++V Sbjct: 121 RIMLLAPAMQAKASVLREELPRLRQRGFQRVRLDGEVRNLDEPKLIPANAGAKLITVDLV 180 Query: 204 VDRFKVRDDLTQRLAESFETAL-------------ELSGGTAVVADMDDP---------- 240 +DR D RLA+S E A + +G A VA + DP Sbjct: 181 IDRLVANADQRSRLADSLELAFREGKDRAIVLAQKQAAGRVASVAGVVDPGPGSASPATT 240 Query: 241 ------KAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRV 294 + E+ S + AC +CG L P+ FSFN+ GACPTC GLG + F P+ + Sbjct: 241 SASAPAEWREIPLSQSLACEVCGDVFERLTPKHFSFNHSEGACPTCGGLGRKMRFVPELI 300 Query: 295 IQNPELSLAGGAIRGW--DRRNFY--YFQMLKSLADHYKFDVEAPWGSLSANVHKVVLYG 350 + +PE S+ GAI+ W +N + +LK LA+ FD + PW SLS + VL+G Sbjct: 301 VPDPEKSVREGAIKPWRIGGKNLIIKHNALLKQLAEQLPFDPDVPWRSLSEETRRAVLHG 360 Query: 351 SGKENIEFKYMNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCE 410 +G+ FK R ++ PF GV+ ++E ++ T+S R L F+ C C Sbjct: 361 AGERQFAFKLRRMREPKTM---PFAGVIADLEESWRHTDSEGFRARLTTFMVAGECPECH 417 Query: 411 GTRLRREA-------------------------------RHVYVENTPL--PAISDMSIG 437 GTRL + R +PL P + + I Sbjct: 418 GTRLNARSGAVRLNLGSEPAPSGTGVPPVDSGSASDDHGRDARATTSPLSFPEFNALDIE 477 Query: 438 HAMEFFNNLKLAGQRAKIAEKILKEIGD-------------RLKFLVNVGLNYLTLSRSA 484 A EF L + + A + + GD RL FL GL YLTL R Sbjct: 478 AAHEFARRLDIEAAH-EFARRAVATYGDNDAVREVVTGIEQRLHFLAETGLGYLTLDRDY 536 Query: 485 ETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVV 544 TLSGGEAQR+RLA+Q+G GL+GV+YVLDEPSIGLH DN++LL TL+ LRD GNTVIVV Sbjct: 537 ATLSGGEAQRVRLATQLGMGLMGVIYVLDEPSIGLHPHDNQKLLDTLVALRDRGNTVIVV 596 Query: 545 EHDEDAIRAADHVIDIGPGAGVHGGEVVAEG-PLEAI-MAVPESLTGQYMSGKRKIEVPK 602 EHDE+ +R AD +I++GP AGV GG V+ +G P + + ++ S TG Y++ R + V K Sbjct: 597 EHDEETMRLADELIELGPEAGVEGGRVLFQGSPADCMKLSAKVSRTGPYLA--RTMGVTK 654 Query: 603 KRVPANPEKV-LKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQ 661 P+ L + AR NNL+ + PVGL TC+TGVSGSGKSTL+ND L A R+ Sbjct: 655 DAATKQPDGAWLTVREARENNLRGIDARFPVGLLTCVTGVSGSGKSTLVNDILAAAAARK 714 Query: 662 LNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPES 721 LNGA P +R I+ L+ F+K++ +DQ PIGR+PRSNPATY + +R+LFA +P + Sbjct: 715 LNGAKTL-PGKHRAIENLDFFEKLVRVDQEPIGRSPRSNPATYVDLLGLLRDLFAQMPLA 773 Query: 722 RARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKYK 781 + RGY RFSFNVRGGRCE CQGDGVIK++M FL D Y PC C G+R+NRETLE+ + Sbjct: 774 KIRGYKASRFSFNVRGGRCERCQGDGVIKLDMQFLADAYAPCPSCGGRRFNRETLEVLFH 833 Query: 782 GKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLA 841 GK+I +VLD+T+ EA F +P + KL TL VGL Y+ LGQSATTLSGGEAQR+KL+ Sbjct: 834 GKSIADVLDLTVREAMSLFRNIPRVMDKLTTLDAVGLGYLTLGQSATTLSGGEAQRIKLS 893 Query: 842 RELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADWI 901 ELSKR G TLYILDEPTTGLH+ DIQ+L+D+L KLRD GNT++VIEHNLDVI ADWI Sbjct: 894 LELSKRQQGHTLYILDEPTTGLHWVDIQKLMDLLFKLRDAGNTVIVIEHNLDVINLADWI 953 Query: 902 VDLGPEGGSGGGEILVSGTPETVAECEA 929 +DLGP GG GG+++ +G P T E +A Sbjct: 954 IDLGPGGGRAGGDVVFAG-PRTEIELKA 980 Score = 127 bits (318), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 81/189 (42%), Positives = 106/189 (56%), Gaps = 15/189 (7%) Query: 405 PCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIG 464 PC SC G R RE V + + D+++ AM F N+ + Sbjct: 814 PCPSCGGRRFNRETLEVLFHGKSIADVLDLTVREAMSLFRNIP--------------RVM 859 Query: 465 DRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVG-VMYVLDEPSIGLHQRD 523 D+L L VGL YLTL +SA TLSGGEAQRI+L+ ++ G +Y+LDEP+ GLH D Sbjct: 860 DKLTTLDAVGLGYLTLGQSATTLSGGEAQRIKLSLELSKRQQGHTLYILDEPTTGLHWVD 919 Query: 524 NERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAV 583 ++L+ L LRD GNTVIV+EH+ D I AD +ID+GPG G GG+VV GP I Sbjct: 920 IQKLMDLLFKLRDAGNTVIVIEHNLDVINLADWIIDLGPGGGRAGGDVVFAGPRTEIELK 979 Query: 584 PESLTGQYM 592 SLTG + Sbjct: 980 APSLTGAAL 988 Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 39/114 (34%), Positives = 58/114 (50%), Gaps = 11/114 (9%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRY--VESLSAYA 61 + VR AR +NL+ I+ P L VTG+SGSGKS+L D L A R+ ++L Sbjct: 666 LTVREARENNLRGIDARFPVGLLTCVTGVSGSGKSTLVNDILAAAAARKLNGAKTLPGKH 725 Query: 62 RQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARV 115 R +L D E L + ++Q+ +PRS T ++ LR LFA++ Sbjct: 726 RAIENL------DFFEKL---VRVDQEPIGRSPRSNPATYVDLLGLLRDLFAQM 770 >UniRef50_A0LG77 UvrA family protein n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LG77_SYNFM Length = 1895 Score = 758 bits (1957), Expect = 0.0, Method: Compositional matrix adjust. Identities = 404/944 (42%), Positives = 585/944 (61%), Gaps = 39/944 (4%) Query: 3 KIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYAR 62 +I +RGAR HNL+ + +PR+++IV+TGLSGSGKSSLAFD L+AEGQRRY+E LSAY R Sbjct: 957 EIVIRGAREHNLQVDEIRLPRNEMIVLTGLSGSGKSSLAFDVLFAEGQRRYLECLSAYVR 1016 Query: 63 QFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCPD 122 Q+ +MEKPDV+ I GL P I+IEQ+++ N RSTV TITEI+ +LRLL++++G CPD Sbjct: 1017 QYFKIMEKPDVEQILGLPPTIAIEQRTSRLNRRSTVATITEIYHFLRLLYSKLGRQHCPD 1076 Query: 123 HDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARIDGE 182 LA+ T Q++ V ++ +LLAP+++ RKG + L G+ + R+DG+ Sbjct: 1077 CGRELASLTYDQILSMVEAEARKGNNLLLAPLVRGRKGIYRDLFMRLRKMGFEKVRVDGQ 1136 Query: 183 VCDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVADMDDPKA 242 L P++ ++H IEV+V + LAE AL L GT + Sbjct: 1137 WMPLDPVPEIARHREHDIEVLVSAAGTKKGPRATLAERVRQALSLGAGT-----LHLEGN 1191 Query: 243 EELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPELSL 302 E ++S CP C + L+PRLFSFN+ GACP+C GLG + F +R++ P++ L Sbjct: 1192 ESRVYSQRLYCPACEKGLAPLDPRLFSFNSRHGACPSCTGLGTVRQFSVERLLGPPDMPL 1251 Query: 303 AGGAIRGWDRRNFYY-------FQMLKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKEN 355 G + G+ R + ++ + D D PW L + + +L+G G+ Sbjct: 1252 KDGLL-GFLRSQVWPKGLKTEGRKLERFWIDRLGIDPGRPWRELPEDAREAMLHGRGRGA 1310 Query: 356 IEFKYMNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGTRLR 415 G+L +ER KE +S+ L F + C C G RL Sbjct: 1311 -------------------PGLLAVLER-VKEEDSAW--SSLEPFHDDVVCPECGGRRLN 1348 Query: 416 REARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNVGL 475 R+AR V V+ + ++ ++I + + + + I I +E+ +R+ FL VGL Sbjct: 1349 RQARSVAVQGLGIGDLTSLAISDFLRKWKRFRFDPKDRPIVAPISREVAERVSFLQKVGL 1408 Query: 476 NYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLR 535 +YL L R+ +TLSGGE QRIRLA+Q+G+ L GV YVLDEP+IGLH DN RLL +L L+ Sbjct: 1409 DYLALDRAGDTLSGGETQRIRLAAQLGSNLRGVCYVLDEPTIGLHPVDNGRLLESLARLK 1468 Query: 536 DLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGK 595 + GNT++VVEHD D +R AD ++++GP AG GG + A+G EA+ +LTG + S Sbjct: 1469 EKGNTILVVEHDADTMRQADTLVELGPEAGRGGGRLTAQGSFEALCGDARTLTGAWFSRS 1528 Query: 596 -RKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTL 654 + + R L++ GA NLK + + +P+G T +TGVSG+GKSTL+++ + Sbjct: 1529 LDDLYLASDRKTPGESGWLEIKGASARNLKKIDVRVPLGALTVVTGVSGAGKSTLVHEVV 1588 Query: 655 FPIAQRQLNGA-TIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRE 713 + + +L G + PA + G + +V+++D +PIGRTPRS PATY G++ +R+ Sbjct: 1589 YRGLRERLGGRYKVRAPAELESMSGHDAVQRVLEVDHNPIGRTPRSTPATYVGIWDEIRK 1648 Query: 714 LFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNR 773 +FA +PESRARG+ PGRFS+NV+GGRCE+C+G G I+VEM FLPD+ VPC+ C G R+N Sbjct: 1649 IFAMLPESRARGFNPGRFSYNVKGGRCESCKGQGEIRVEMSFLPDVSVPCETCGGSRFNT 1708 Query: 774 ETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGG 833 ETL +YKGK+I +VL MTI+EA E FDA P +A+ L+ L D+GL Y+ +GQS+ TLSGG Sbjct: 1709 ETLAARYKGKSIADVLKMTIDEAAELFDAYPRVAKPLRVLTDLGLGYLAIGQSSPTLSGG 1768 Query: 834 EAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLD 893 EAQR+KLA EL T TLY+LDEPTTGLH AD+++L+DVL L G+T++VIEHN+D Sbjct: 1769 EAQRIKLASELGNNRT-HTLYVLDEPTTGLHRADVKKLVDVLRALSAHGHTVLVIEHNMD 1827 Query: 894 VIKTADWIVDLGPEGGSGGGEILVSGTP-ETVAECEASHTARFL 936 + AD+++D+GP G+ GG ++ G P E +A+ E S TAR L Sbjct: 1828 FVWAADYVIDIGPGSGAKGGRVVAKGAPAELLAQGERSATARAL 1871 Score = 612 bits (1579), Expect = e-173, Method: Compositional matrix adjust. Identities = 394/946 (41%), Positives = 555/946 (58%), Gaps = 38/946 (4%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 63 I +RG R HNLKNI+L +P +KLI V+GLSGSGKSSLA TLYAEGQRRYVE+ S YARQ Sbjct: 14 IRLRGVRQHNLKNIDLDLPLNKLIAVSGLSGSGKSSLALHTLYAEGQRRYVETFSPYARQ 73 Query: 64 FLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCPDH 123 FL M+ P+ D IEG+ P I+IE + + RSTVGTITEI+D+L+LL+AR+ CP+ Sbjct: 74 FLERMDPPEADLIEGIPPGIAIESGTAVRSSRSTVGTITEINDHLKLLYARLAVLHCPEC 133 Query: 124 DVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARIDGEV 183 D P+A T + ++ P+ R+++ P + + G+ ++L + G++R + G Sbjct: 134 DRPVARDTPESVYRSLQELPDRSRVLIAFPFLPDNSGDWVRSL---VASGFLRLYVGGRT 190 Query: 184 CDLSDPPKLELQ-KKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVADMDDPKA 242 +L + + + + VVVDR +R+A+S TA G A V + D Sbjct: 191 VELEEIGDAASEYGRGEVLVVVDRLSWGSAARERVADSLATAFHAGNGHAAVVVLPDTVK 250 Query: 243 EELLFSANFACPIC--GYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPEL 300 FS++ +C C G S P LFSFN+P GACP C G G D D VI + L Sbjct: 251 R---FSSDLSCADCNPGLSFSPPTPNLFSFNSPLGACPECRGFGRTIGVDLDLVIPDRRL 307 Query: 301 SLAGGAIRGWDRRNFYYFQMLKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKENIEFKY 360 +L GAI+ + +++ A V+ P+ L + ++ G+ Sbjct: 308 TLRRGAIKPFGTDRMETEDLMRFCAGE-GIPVDVPFEDLDEKDREKIINGT--------- 357 Query: 361 MNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGTRLRREARH 420 + G+ E +T VR L+++ + C SC GTR R E Sbjct: 358 -----------KDYYGIKGYFEWLEGKTYKMHVRVFLSRYRAYTRCRSCAGTRYRPETLL 406 Query: 421 VYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTL 480 + + A+S SI EFF+ R AE ++KE+ RL+FL VGL YL+L Sbjct: 407 YRLHGETIGALSAWSIEKCAEFFSGGWPELARDPAAELLVKEVRSRLEFLRAVGLEYLSL 466 Query: 481 SRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNT 540 R + TLSGGE QR+ L +G+ +V V+YVLDEPS+GLH RD +RL+G L L D+GNT Sbjct: 467 DRQSRTLSGGEVQRVHLTRALGSAMVNVLYVLDEPSVGLHARDQKRLMGQLRRLVDIGNT 526 Query: 541 VIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKI-- 598 V+VVEHD D IR D V+D+GP G GGE+V G E + SLTG Y+SG+ ++ Sbjct: 527 VVVVEHDPDMIRFCDLVVDMGPEGGEKGGEIVYRGTPEGMKREKRSLTGGYLSGRLEVGC 586 Query: 599 EVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIA 658 E+ ++R P N + L L GAR NNLK+VT+ P+G+ ++GVSGSGKSTL+ +L+ Sbjct: 587 ELRRRRRPEN-GRSLVLRGARENNLKNVTVEFPLGILVGVSGVSGSGKSTLVEKSLYYNW 645 Query: 659 QRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGV 718 R++ AT A P ++G E ++V+ +DQ IGRTPR+N TY+ P+R+L A Sbjct: 646 LRKMGRATEA-PGALDAMEGAEWIEEVVLVDQQAIGRTPRANLLTYSRAIDPIRKLLAQT 704 Query: 719 PESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEI 778 PE+ ARGY FSFNV GGRCE C+G+G +VEM FL D+ + C QC G R+ E LE+ Sbjct: 705 PEAVARGYPASHFSFNVPGGRCELCKGEGFERVEMQFLADVLIRCPQCNGLRFKDEILEV 764 Query: 779 KYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRV 838 + +G +I ++L+ T E + F L + LQ + D+GL Y+RLGQ +TLSGGEAQR+ Sbjct: 765 RARGLSIGDMLEATARELMDRFADHEPLVKALQPIQDIGLGYLRLGQPLSTLSGGEAQRL 824 Query: 839 KLARELS----KRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDV 894 KL L+ L+ILDEPTTGLH D+Q+L+ VL +L D G++++V+EHNLD Sbjct: 825 KLVHFLAAGRPSSNGRHRLFILDEPTTGLHPHDLQKLVVVLRRLVDLGHSVLVVEHNLDF 884 Query: 895 IKTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLKPML 940 +K+ DW++DLGP GG GGE++ +G PE VA S T RFL+ L Sbjct: 885 LKSCDWLIDLGPGGGEHGGEVVATGPPEAVAAHPESCTGRFLREKL 930 Score = 134 bits (337), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 114/333 (34%), Positives = 168/333 (50%), Gaps = 36/333 (10%) Query: 406 CASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGD 465 C C G R + E V +I DM A E + R E ++K Sbjct: 749 CPQCNGLRFKDEILEVRARGL---SIGDMLEATARELMD-------RFADHEPLVKA--- 795 Query: 466 RLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGV-----MYVLDEPSIGLH 520 L+ + ++GL YL L + TLSGGEAQR++L + AG +++LDEP+ GLH Sbjct: 796 -LQPIQDIGLGYLRLGQPLSTLSGGEAQRLKLVHFLAAGRPSSNGRHRLFILDEPTTGLH 854 Query: 521 QRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAI 580 D ++L+ L L DLG++V+VVEH+ D +++ D +ID+GPG G HGGEVVA GP EA+ Sbjct: 855 PHDLQKLVVVLRRLVDLGHSVLVVEHNLDFLKSCDWLIDLGPGGGEHGGEVVATGPPEAV 914 Query: 581 MAVPESLTGQYMS-------GKRKIEVP----KKRVPANPEKVLKLTGARGNNLKDVTLT 629 A PES TG+++ G R P + +P + + + GAR +NL+ + Sbjct: 915 AAHPESCTGRFLREKLEGALGARAEAAPFDPGEDGAAGSPSREIVIRGAREHNLQVDEIR 974 Query: 630 LPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAEPAPY------RDIQGLEHFD 683 LP +TG+SGSGKS+L D LF QR+ A Y D++ + Sbjct: 975 LPRNEMIVLTGLSGSGKSSLAFDVLFAEGQRRYLECLSAYVRQYFKIMEKPDVEQILGLP 1034 Query: 684 KVIDIDQSPIGRTPRSNPATYTGVFTPVRELFA 716 I I+Q RS AT T ++ +R L++ Sbjct: 1035 PTIAIEQRTSRLNRRSTVATITEIYHFLRLLYS 1067 >UniRef50_Q3B5F8 Excinuclease ABC subunit A n=11 Tax=Chlorobiaceae RepID=Q3B5F8_PELLD Length = 956 Score = 755 bits (1950), Expect = 0.0, Method: Compositional matrix adjust. Identities = 422/960 (43%), Positives = 587/960 (61%), Gaps = 55/960 (5%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 63 I ++G THNL+NI++ IPR++ +V+TG+SGSGKSSLAFDTLYAEG RRYVESLSAY RQ Sbjct: 19 IVLKGITTHNLQNISVRIPRNRFVVLTGVSGSGKSSLAFDTLYAEGHRRYVESLSAYVRQ 78 Query: 64 FLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCPDH 123 FL M +P+++ +EG++PAI+IEQ+S NPRSTVGT++EI+DYLRLL+AR+G+ D Sbjct: 79 FLERMPRPEIEVVEGIAPAIAIEQRSIPRNPRSTVGTVSEIYDYLRLLYARIGKIYSRDT 138 Query: 124 DVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEH-----TKTLENLASQGYIRAR 178 + + T +V EG + G H + + NL +G+ R Sbjct: 139 NELVLKHTPDDVVMQAGFFLEGTKFYAGFLFPSHEDGSHHLCTVDEEISNLLKKGFFRVV 198 Query: 179 IDGEVCDLSDP------PKLELQKKHTIEVVVDRFKVRDD--LTQRLAESFETALELSGG 230 V DL+ P + + + V+VDRF R D R+AE+ E+ SGG Sbjct: 199 SGDTVLDLNSPDDCRKVAMMSEAARRALLVLVDRFVTRHDKKFQSRVAEAAESCFSESGG 258 Query: 231 TAVVADMDDPKAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFD 290 AV+ + + FS + G +E P+LF+FN+P GAC TC G G D Sbjct: 259 HAVLQVVG---GKTYRFSDRLE--LNGIEYQEPSPQLFAFNSPIGACTTCQGFGRIAGID 313 Query: 291 PDRVIQNPELSLAGGAIRGWDRRNFYYFQMLKSLADHYKFDVE-----APWGSLSANVHK 345 V+ + L+LA GAI W+ ++ Y++++E AP + +V Sbjct: 314 EHAVVPDRSLTLAEGAIVCWN-------------SEKYRWNLEELLLAAPKAGIPVDVPY 360 Query: 346 VVLYGSGKENIEFKYMNDRGDTSIRRHPFEGVLHNMERRYKETESSA-----VREELAKF 400 L + KE I +K + G I PF + E E A R L+++ Sbjct: 361 EKLSHAEKERI-WKGVPGTGYRGI--WPF----------FAEIEKDAGYKMHFRVFLSRY 407 Query: 401 ISNRPCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKIL 460 C CEG+RL +AR V V + ++ M+I A FF NL+++ K+AE ++ Sbjct: 408 RGYAICPDCEGSRLNPDARLVRVSGRNITDVARMNIADAHAFFKNLEISPFDRKVAESVI 467 Query: 461 KEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLH 520 +EI RL +L++VGL+YLTL R TLSGGE QRI L++ +G+ LVG +Y+LDEPSIGLH Sbjct: 468 EEIEKRLGYLLDVGLDYLTLDRLTHTLSGGEFQRINLSTSLGSPLVGAIYILDEPSIGLH 527 Query: 521 QRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAI 580 Q D+ RL+ L LRDLGNTV+VVEHD + I AAD VID+GP AG GGEVV G +E + Sbjct: 528 QSDSARLITLLQKLRDLGNTVVVVEHDREIIEAADEVIDLGPQAGRLGGEVVFHGSVEEM 587 Query: 581 MAVPESLTGQYMSGKRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITG 640 S+T +Y+ +R I +P+ R + +++ GA NNLK++ + P+G+ TC+TG Sbjct: 588 KRSGTSMTAEYLQDRRSIPLPEVRRTPDFTACIEINGAMQNNLKNIDVRFPLGVMTCVTG 647 Query: 641 VSGSGKSTLINDTLFPIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSN 700 VSGSGKSTL+ND L R+ G E +R I G D+V +DQSPIG++ RSN Sbjct: 648 VSGSGKSTLVNDILNRGLMREKEGVK-DEVGTHRAITGGWQIDRVEHVDQSPIGKSSRSN 706 Query: 701 PATYTGVFTPVRELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIY 760 P TY +F +R +FA P++RARG+ G FSFN+ GGRCEAC G+G +K+EM FL DI Sbjct: 707 PVTYLKIFDDIRSVFAQTPDARARGWKAGYFSFNIPGGRCEACSGEGSVKIEMQFLADIE 766 Query: 761 VPCDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTY 820 C++C G RY +TLE+KY+G++I EVLDMT+EEA FF +++RKL L +VGL Y Sbjct: 767 AVCEECGGLRYKADTLEVKYRGRSIAEVLDMTVEEALVFFAREKSISRKLGVLDEVGLGY 826 Query: 821 IRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRD 880 IRLGQS++TLSGGEAQR+KLA +++ TL++ DEPTTGLHF DI++LL KL + Sbjct: 827 IRLGQSSSTLSGGEAQRLKLASFIARADVEHTLFLFDEPTTGLHFEDIRKLLGCFSKLLE 886 Query: 881 QGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLKPML 940 Q NT++VIEHN D+I ADW++DLGP G GG+++ GTPE +A E S T R L+P+ Sbjct: 887 QHNTLIVIEHNPDIISQADWVIDLGPGAGDRGGQVIGEGTPEDLAGMEQSLTGRHLQPLF 946 >UniRef50_C9PZ01 Excision endonuclease subunit UvrA n=8 Tax=Bacteroidetes RepID=C9PZ01_9BACT Length = 983 Score = 748 bits (1930), Expect = 0.0, Method: Compositional matrix adjust. Identities = 412/960 (42%), Positives = 585/960 (60%), Gaps = 43/960 (4%) Query: 1 MDK-IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSA 59 MDK IE++G R +NLKNI+L IPR+K I + G+SGSGKSSLAFDTLYAEGQRRYVESLS+ Sbjct: 45 MDKHIELKGVRVNNLKNISLNIPRNKFIAIAGVSGSGKSSLAFDTLYAEGQRRYVESLSS 104 Query: 60 YARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPR 119 YARQFL M KP+ D I+GL PAI+IEQK + NPRSTVGT TEI++Y+RLLFAR+G+ Sbjct: 105 YARQFLGNMSKPECDFIKGLPPAIAIEQKVNTRNPRSTVGTSTEIYEYMRLLFARIGKTF 164 Query: 120 CPDHDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARI 179 P + +V ++ G + ++LAPI K L +GY R Sbjct: 165 SPISGQEVKKHSVEDVIQCTKQYSNGTKFVVLAPIHVPEGRTFEKQLNMFVQEGYARLWH 224 Query: 180 DGEVCDLSD----PPKLELQKKHTIEVVVDRFKVRD--DLTQRLAESFETALELSGGTAV 233 G+ + D +L+ K +++DR V D + RL +S ETA+ G Sbjct: 225 KGDFVRIDDLTENAERLKDSKPDEYLLLIDRLAVDDTKEHISRLTDSVETAMYEGHGECR 284 Query: 234 VADMDDPKAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDR 293 + + P FS+ F G + E +F+FN+P GACP+C+G G + Sbjct: 285 LVFL--PSNITYEFSSRFETD--GMTFDEPSDNMFAFNSPLGACPSCEGFGKVIGIEESL 340 Query: 294 VIQNPELSLAGGAIRGW--DRRNFYYFQMLKSLADHYKFDVEAPWGSLSANVHKVVLYGS 351 VI N LS+ G ++ W D+ + + + A F + P+ LS ++ +G Sbjct: 341 VIPNSTLSVYDGCVQCWHGDKMGIWKEEFCRRAAKD-DFPIFKPYFELSRKEKDMLWHGL 399 Query: 352 GKE---NIEFKYMNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCAS 408 E +I + D +R + ++ M RY+ C Sbjct: 400 PSEKGRDISEQVSIDAFFQMVRENQYKIQYRVMLNRYR---------------GKTTCPE 444 Query: 409 CEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDRLK 468 C GTRL++EA V ++ + + +M IG +F+NL+L AKIA ++L EI +RL+ Sbjct: 445 CHGTRLKKEATWVKIDGMSIADLVEMPIGKLKTWFDNLQLNDYDAKIAARLLTEINNRLQ 504 Query: 469 FLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLL 528 FL++VGL+YLTL+R + TLSGGE+QRI+L + +G+ LVG +Y+LDEPSIGLH RD +RL+ Sbjct: 505 FLLDVGLHYLTLNRQSNTLSGGESQRIQLTTSLGSSLVGSLYILDEPSIGLHSRDTDRLI 564 Query: 529 GTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAV----- 583 L L +GNTVIVVEHDED +R ADH+ID+GP AG GGE+V GP I Sbjct: 565 KVLNDLVQIGNTVIVVEHDEDILRKADHLIDVGPDAGRLGGEIVFNGPASDIKKAALDRY 624 Query: 584 PESLTGQYMSGKRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSG 643 P S T Y++G KI+ P R N + ++L GAR NNLK + +T P+ + T ITGVSG Sbjct: 625 PSSHTVAYLTGADKIDTPISRRKWN--QSIQLKGARMNNLKGIDVTFPLNVLTVITGVSG 682 Query: 644 SGKSTLINDTLFPIAQRQLNGATIAEPAPYRDIQG-LEHFDKVIDIDQSPIGRTPRSNPA 702 SGKS+LI L P +R + G P + ++G L+ + +DQ+PIGR+ RSNPA Sbjct: 683 SGKSSLIKGILHPALKRSM-GDVADAPGEFIALEGDLKQVKHIEFVDQNPIGRSTRSNPA 741 Query: 703 TYTGVFTPVRELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVP 762 TY + P+R+LFA P ++ G++ FSFN GGRCE C G GVI VEM F+ D+ + Sbjct: 742 TYVKAYEPIRQLFANQPLAKQLGFSAQYFSFNAEGGRCEECNGAGVITVEMQFMADLVLE 801 Query: 763 CDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDA--VPALARKLQTLMDVGLTY 820 C+ C G+R+ ++ L+++Y+GK I+++LDMT+ EA EFF + ++ +LQ L DVGL Y Sbjct: 802 CETCHGQRFKQDVLDVRYEGKNINDILDMTVSEAIEFFTSHKQTSVVNRLQPLEDVGLGY 861 Query: 821 IRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRD 880 I+LGQ+++TLSGGE QRVKLA + + TL+I DEPTTGLHF DI++LL + L + Sbjct: 862 IKLGQNSSTLSGGENQRVKLAYFIGQEKAEPTLFIFDEPTTGLHFHDIKRLLRAMGALIE 921 Query: 881 QGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLKPML 940 +G++++VIEHN+DVIK AD ++DLGP+GG GG+++ +GTPE +A C+ S T ++LK L Sbjct: 922 RGHSVIVIEHNMDVIKCADHVIDLGPDGGDRGGKLVFAGTPEELANCKESITGKYLKAQL 981 >UniRef50_Q6MRC9 Excinuclease ABC subunit A n=1 Tax=Bdellovibrio bacteriovorus RepID=Q6MRC9_BDEBA Length = 982 Score = 738 bits (1906), Expect = 0.0, Method: Compositional matrix adjust. Identities = 408/995 (41%), Positives = 585/995 (58%), Gaps = 80/995 (8%) Query: 1 MDKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAY 60 M I + G + +NLKNI + IP + V+ G SGSGKSSLAF+TL+AEGQRR++ES+S Y Sbjct: 1 MKDIHLWGVKQNNLKNIEVKIPVGSMTVICGPSGSGKSSLAFETLFAEGQRRFIESMSNY 60 Query: 61 ARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRC 120 ARQFL+ KPD++ I + PAISIEQK+T + RSTVGT TEI DYLRLL+ ++G+ C Sbjct: 61 ARQFLNKAPKPDIEGINNIPPAISIEQKNTVKSSRSTVGTTTEIIDYLRLLYEKIGKSYC 120 Query: 121 PDHDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPI-----IKERKGEHTKTLENLASQGYI 175 P H P ++V++ D VL GKR LL I + E K H+ L++ + YI Sbjct: 121 PTHHCPTEKESVTEATDKVLKNFAGKRGYLLVEINSEGRVAEGKKLHSLLLQDGYLRIYI 180 Query: 176 RARID------------------------------------------GEVCDLSDPPKLE 193 + G V ++ + ++ Sbjct: 181 PKVTEVKKPAAKAAGKKTKASGKKASKKVETPEIVATHPGGLTNEEMGTVVEIGEAAAIK 240 Query: 194 LQ-KKHTIEVVVDRFKVRDDLTQRLAESFETALELS--GGTAVV---ADMDDPKAEELLF 247 K T +V+DR +D RLA+S A E S T ++ A + E L Sbjct: 241 KGLPKETFYLVIDRMSFNEDERGRLADSLTQAYEASIKYNTHLITRRATILSTDGERLQV 300 Query: 248 SANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPELSLAGGAI 307 S +CP+CGY+ L +LFSFN+P GACPTC G G D ++VI NP LSLA GA+ Sbjct: 301 SEEASCPVCGYTPPPLSSKLFSFNSPIGACPTCKGFGNILDIDEEKVIPNPNLSLAQGAL 360 Query: 308 RG-WDRRNFYYFQMLKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKENIEFKYMNDRGD 366 W + + L + K D PW L V+ G+ Sbjct: 361 SPFWMPSAAHEKKQLLAYCKKTKIDTHTPWKDLPKAERDVIWNGNKD------------- 407 Query: 367 TSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGTRLRREARHVYVENT 426 F GV E + VR +++F S C +C+G RLR EA HV + N+ Sbjct: 408 -------FFGVRGLFEYLDQIKYKMHVRVFISRFRSPFQCPTCKGARLRTEANHVLIANS 460 Query: 427 PLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTLSRSAET 486 + +S+++I FF L++ + ++A ++LK+I RL+FL+ VG++YL+L R T Sbjct: 461 NINDLSNLTIEDLNTFFQKLEVTPFQQEVAGEVLKQIRSRLEFLMRVGVHYLSLGRETRT 520 Query: 487 LSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEH 546 LSGGE QR+ LA+Q+G GL +YVLDEP++GLH RDN+RL+ L L+DLGNT+++VEH Sbjct: 521 LSGGEYQRLILANQLGMGLSQALYVLDEPTVGLHPRDNDRLISILKDLKDLGNTLVIVEH 580 Query: 547 DEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEVPKKRVP 606 D D I+A++H+I++GPG+G GGEVV G E +S T ++ + + + P Sbjct: 581 DHDVIKASEHIIEMGPGSGYLGGEVVYSGTTEKFYDYEKSNTVPFLKPSKNWQALRTIRP 640 Query: 607 A---NPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLN 663 N + ++L GA+G+NLK++ +T P+ +TGVSGSGKSTLI+ TL+P R L+ Sbjct: 641 VDVDNYKVKIELKGAKGHNLKNLDVTFPLNRLVTVTGVSGSGKSTLISKTLYPALARALD 700 Query: 664 GATIAEPAP-YRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESR 722 + PA Y + G+EH V+ IDQSPIG++ RS+P TY F +R + + PES+ Sbjct: 701 IEYM--PAQDYSGLDGVEHIKNVLLIDQSPIGKSARSSPITYLKAFDAIRMIMSTTPESQ 758 Query: 723 ARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKYKG 782 +RGYT G FS NV GGRC AC+G G +++M F+ ++ +PCD C GK+Y E LEI+YK Sbjct: 759 SRGYTAGTFSLNVDGGRCPACKGTGYEEIDMMFMDNVVIPCDVCDGKKYRPEILEIQYKN 818 Query: 783 KTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLAR 842 K IHE+L MT+ EA FF A P + + L L +VGL Y++LGQ A +LSGGE+QR+K+A+ Sbjct: 819 KNIHEILSMTVNEAMNFFVAHPNIRKPLSVLKEVGLDYLQLGQPANSLSGGESQRLKIAK 878 Query: 843 ELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADWIV 902 ELS+ TLYILDEPTTGLHF +++ L+ VL+KL + G ++VV+EHNLDVI+ +D+++ Sbjct: 879 ELSQVQQKSTLYILDEPTTGLHFREVELLMKVLNKLIETGGSVVVVEHNLDVIRGSDYVI 938 Query: 903 DLGPEGGSGGGEILVSGTPETVAECEASHTARFLK 937 DLGPE G GG I+ +GTP+ + + + S T ++LK Sbjct: 939 DLGPEAGKKGGNIVATGTPDDIMKVKKSLTGQYLK 973 Score = 145 bits (367), Expect = 6e-33, Method: Compositional matrix adjust. Identities = 99/300 (33%), Positives = 149/300 (49%), Gaps = 50/300 (16%) Query: 682 FDKVIDIDQSPIGRTPRSNPATYTGVFTPV---------RELFAGVPESRARGYTP---- 728 F ++DID+ + P N + G +P ++L A +++ +TP Sbjct: 336 FGNILDIDEEKV--IPNPNLSLAQGALSPFWMPSAAHEKKQLLAYCKKTKIDTHTPWKDL 393 Query: 729 -----------GRFSFNVRGGRCEACQGDGVIKVEMH---FLPDIYVP--CDQCKGKRYN 772 + F VRG Q IK +MH F+ P C CKG R Sbjct: 394 PKAERDVIWNGNKDFFGVRGLFEYLDQ----IKYKMHVRVFISRFRSPFQCPTCKGARLR 449 Query: 773 RETLEIKYKGKTIHEVLDMTIEEAREFF--------------DAVPALARKLQTLMDVGL 818 E + I+++ ++TIE+ FF + + + +L+ LM VG+ Sbjct: 450 TEANHVLIANSNINDLSNLTIEDLNTFFQKLEVTPFQQEVAGEVLKQIRSRLEFLMRVGV 509 Query: 819 TYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKL 878 Y+ LG+ TLSGGE QR+ LA +L G Q LY+LDEPT GLH D +L+ +L L Sbjct: 510 HYLSLGRETRTLSGGEYQRLILANQLG-MGLSQALYVLDEPTVGLHPRDNDRLISILKDL 568 Query: 879 RDQGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLKP 938 +D GNT+V++EH+ DVIK ++ I+++GP G GGE++ SGT E + E S+T FLKP Sbjct: 569 KDLGNTLVIVEHDHDVIKASEHIIEMGPGSGYLGGEVVYSGTTEKFYDYEKSNTVPFLKP 628 >UniRef50_B2RMJ8 Excinuclease ABC A subunit n=30 Tax=Bacteria RepID=B2RMJ8_PORG3 Length = 953 Score = 728 bits (1880), Expect = 0.0, Method: Compositional matrix adjust. Identities = 418/956 (43%), Positives = 578/956 (60%), Gaps = 43/956 (4%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 63 I ++GAR +NLKNI+L IPR KL+VVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ Sbjct: 16 IIIKGARVNNLKNISLTIPRGKLVVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 75 Query: 64 FLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCPDH 123 FL M KP+ D I G+ PAI+IEQ+ S NPRSTV T TEI++YLRLLFARVG P Sbjct: 76 FLGRMRKPECDLIAGVPPAIAIEQRVVSRNPRSTVATSTEIYEYLRLLFARVGRTISPRS 135 Query: 124 DVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARIDGEV 183 + TV+ +V V +P G +L LL + + + L+ QGY R + GE+ Sbjct: 136 GEEVKKHTVADLVAYVADRPIGSKLYLLVGLQAPQGRSLREHLQIQQQQGYTRIFVAGEM 195 Query: 184 CDLSDPPKLELQKKHTIE--VVVDRFKV---RDDLTQRLAESFETALELSGGTAVVADMD 238 + D E T +++DR + + D RLA+S ETA G A + ++ Sbjct: 196 KRIEDILSAETDFSDTASCFLLIDRLVIAEDKADYESRLADSAETAF-FEGNGACLLRIE 254 Query: 239 DPKA--EELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQ 296 P+ EE +FS F G + +E P +FSFNNP GACPTC+G G D D V+ Sbjct: 255 SPEGTVEERMFSNVFEAD--GRTFQEPSPEMFSFNNPIGACPTCEGFGKVMGIDEDLVVP 312 Query: 297 NPELSLAGGAIRGW-----DRRNFYYFQMLKSLADHYKFDVEAPWGSLSANVHKVVLYGS 351 N LS+ + W Y+ Q L F V P+ LS ++ G Sbjct: 313 NKSLSVYEECVACWIGAKSQMWKDYFIQKSVPLG----FPVHKPYKELSDTERDMLWRGV 368 Query: 352 GKENIEFKYMN-DRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCE 410 ++ + D + ++R +H ++ R + L F C C Sbjct: 369 PTGEPDYPSIGIDDYFSMLQRD-----MHKIQNRVR----------LTHFRGKATCPDCR 413 Query: 411 GTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDRLKFL 470 G RL+ +A V + + ++ +++ FF L+L+ I+ ++L+EIG RL FL Sbjct: 414 GMRLKPDALCVRIGGRNISELTALTVEETSAFFEGLQLSEDDLHISRRLLEEIGKRLSFL 473 Query: 471 VNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGT 530 + VGL YLTL R + TLSGGE+QRI LA+Q+G+ LVG +YVLDEPSIGLHQRD RL+G Sbjct: 474 LEVGLGYLTLDRLSNTLSGGESQRISLATQLGSSLVGSLYVLDEPSIGLHQRDTHRLIGV 533 Query: 531 LIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQ 590 L LRDLGNTV+VVEHDE+ IR+AD++IDIGP AG GGEVV G + I T Sbjct: 534 LKRLRDLGNTVVVVEHDEETIRSADYIIDIGPKAGRQGGEVVYAGEYDRIDKDTPGYTAA 593 Query: 591 YMSGKRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLI 650 Y++G+ KIE+P+ R P N +++ A +NLK V + P+ + T +TGVSGSGKSTL+ Sbjct: 594 YLTGREKIELPRLRRPWN--SYIEVREASKHNLKGVNVRFPLHVLTVVTGVSGSGKSTLV 651 Query: 651 NDTLFPIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTP 710 D + +R L G + A + ++ + +DQ+ GR+ RSNP TY G + Sbjct: 652 RDLFYEGVKRILEGGSTQGLACEGIVGDIKSVRDIQYVDQNNFGRSTRSNPVTYIGAYDD 711 Query: 711 VRELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKR 770 +R+L++ +P S+ GY P FSFN GGRCE C+G+G I VEM F+ DI + C++C GKR Sbjct: 712 IRKLYSALPLSKQMGYQPYFFSFNKEGGRCEVCKGEGSIVVEMQFMADIVLECEECHGKR 771 Query: 771 YNRETLEIKYKGKTIHEVLDMTIEEAREFFDAVP------ALARKLQTLMDVGLTYIRLG 824 + +E L+++Y G I+++L+MT+ +A EFF P + KL+ L +VGL Y++LG Sbjct: 772 FRKEILDVEYCGANIYDLLEMTVNQAVEFFTDHPKAGYTDKIVEKLECLREVGLGYLKLG 831 Query: 825 QSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNT 884 QS++TLSGGE QRVKLA L + TL+I DEPTTGLH DI+ LL L L D+G++ Sbjct: 832 QSSSTLSGGENQRVKLAAYLGQAKPAPTLFIFDEPTTGLHIHDIRTLLHALSALIDKGHS 891 Query: 885 IVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLKPML 940 +VV+EHN+++IK+AD I+DLGPEGG GG ++ +GTPE V C+ S+T ++LK +L Sbjct: 892 VVVVEHNMEMIKSADCIIDLGPEGGGAGGYLVATGTPEEVMRCDTSYTGKWLKEIL 947 Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 44/119 (36%), Positives = 65/119 (54%), Gaps = 6/119 (5%) Query: 606 PANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGA 665 P + E ++ + GAR NNLK+++LT+P G +TG+SGSGKS+L DTL+ QR+ + Sbjct: 9 PTSGEAIIIIKGARVNNLKNISLTIPRGKLVVVTGLSGSGKSSLAFDTLYAEGQRRYVES 68 Query: 666 TIAEPAPYRDIQGLEHFDKV------IDIDQSPIGRTPRSNPATYTGVFTPVRELFAGV 718 A + D + I I+Q + R PRS AT T ++ +R LFA V Sbjct: 69 LSAYARQFLGRMRKPECDLIAGVPPAIAIEQRVVSRNPRSTVATSTEIYEYLRLLFARV 127 >UniRef50_A3ZSW8 Excinuclease ABC subunit A n=1 Tax=Blastopirellula marina DSM 3645 RepID=A3ZSW8_9PLAN Length = 949 Score = 728 bits (1880), Expect = 0.0, Method: Compositional matrix adjust. Identities = 395/956 (41%), Positives = 571/956 (59%), Gaps = 43/956 (4%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 63 I++RG HNLK ++L + KLIV G+SGSGK+S+A DTLYAEGQRRY+ES SAY RQ Sbjct: 6 IQLRGVEVHNLKKVDLDLDHRKLIVFCGVSGSGKTSMALDTLYAEGQRRYIESFSAYTRQ 65 Query: 64 FLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCPDH 123 FL +EKP + I+G+ PA+++ + + S + RSTVGT TE DYLRLLFA+VGE CP Sbjct: 66 FLERLEKPAAESIDGIPPALAVTRGNDSRSNRSTVGTATETTDYLRLLFAKVGEIICPCC 125 Query: 124 DVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARIDGEV 183 + T ++ +L ++ML P+ +++ + + +L G++R + Sbjct: 126 GAKIQRDTPQEVAQRILEMNSPGKMMLTFPVAPDQEETWEQVVADLREDGFVRVISGQQT 185 Query: 184 CDLS-DPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETAL--------------ELS 228 +L+ D +L ++ + DR +RL ES ETA EL+ Sbjct: 186 LNLTTDSQQL---NGGAVQAIADRLSGEGLKAERLQESLETAFLHGEGVCQLLVESEELN 242 Query: 229 GGT--AVVADMDDPKAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQ 286 G ++ +D ++S C C E EPRLF+FN+P GAC C+G G Sbjct: 243 GAGDHGILQQIDGRSWRRHVYSNQLRCDTCNLEFIEPEPRLFNFNSPLGACQACEGFGNV 302 Query: 287 QYFDPDRVIQNPELSLAGGAIRGWDRRNFYY-FQMLKSLADHYKFDVEAPWGSLSANVHK 345 D D ++ + +LA GAI W+ +++ + L +LA Y P+ L+ + Sbjct: 303 IDMDMDLIVPDVSKTLADGAIAPWNTPAYHHELEELLALAKDYDLPTNVPFRELTEEHLR 362 Query: 346 VVLYGSGKENIEFKYMNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRP 405 ++ G + EF + +G +ERR + +R L+++ S R Sbjct: 363 LIREGVPER--EFGGL-------------KGFFQWLERRKYKMH---LRVFLSRWRSFRD 404 Query: 406 CASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGD 465 C SC G RLR E+ V + + +S M I + EFF +LK+ + +A ++L ++ D Sbjct: 405 CESCHGKRLRPESLAVRIGGKNIAEVSKMKIRDSYEFFKSLKVDPRHQAVARQVLSQLLD 464 Query: 466 RLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNE 525 RLK+L VGL YL L R+ TLSGGEAQR+ L S +G+ LV ++YV DEPS+GLH D E Sbjct: 465 RLKYLNVVGLGYLALDRTIRTLSGGEAQRVALTSTLGSSLVNMLYVFDEPSVGLHPADVE 524 Query: 526 RLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPE 585 RL G + L GNTV++VEH+E IR AD +I+ GPGAG GGE++ +G + ++ E Sbjct: 525 RLAGAIRDLNKRGNTVVLVEHEESMIRRADEIIEFGPGAGERGGEIIFQGTPQELLTSEE 584 Query: 586 SLTGQYMSGKRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSG 645 +LTG Y+ G+RK+ +KR +V ++ GARGNNLK++ + P+G+ +TGVSG+G Sbjct: 585 TLTGDYLMGRRKVIHLEKRRETTHGRV-RIKGARGNNLKNIEVEFPLGVLCVVTGVSGAG 643 Query: 646 KSTLINDTLFP-IAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATY 704 KSTL+++TL+P + +R+ A A D+ G D V+ +DQSPIGR+PRSNP TY Sbjct: 644 KSTLVDNTLYPALCRRKRKEAPKALDCD--DVFGDGQIDDVVLVDQSPIGRSPRSNPVTY 701 Query: 705 TGVFTPVRELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCD 764 F +R +FA ++R +T FSFNV GGRC+AC GDG I ++M FL D+Y+ C Sbjct: 702 IKAFDEIRSVFAATVQARTHNFTASHFSFNVNGGRCDACDGDGHIAIDMQFLADVYMKCP 761 Query: 765 QCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLG 824 +CKG+RY ++ LE+ Y+GK I EVL+MTI EA FF P + KLQ L+DVGL Y+RLG Sbjct: 762 ECKGRRYKKDVLEVLYRGKNIAEVLNMTIREAFVFFRGQPKVQSKLQRLIDVGLDYLRLG 821 Query: 825 QSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNT 884 Q A TLS GEAQR+KLA L+ G+TL++LDEPTTGLHFADI QLLD + L G++ Sbjct: 822 QPANTLSAGEAQRLKLAGYLASSKRGRTLFLLDEPTTGLHFADIAQLLDCFNSLLQVGHS 881 Query: 885 IVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLKPML 940 ++V+EHNL ++ AD+I+D+GP GG+++ +GTPE VA+ E S T R L L Sbjct: 882 LIVVEHNLHMMMAADYIIDMGPGAADEGGQVVATGTPEEVAQNENSRTGRALAEAL 937 Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 40/121 (33%), Positives = 63/121 (52%), Gaps = 15/121 (12%) Query: 3 KIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLY-AEGQRRYVESLSAYA 61 ++ ++GAR +NLKNI + P L VVTG+SG+GKS+L +TLY A +R+ E+ A Sbjct: 610 RVRIKGARGNNLKNIEVEFPLGVLCVVTGVSGAGKSTLVDNTLYPALCRRKRKEAPKAL- 668 Query: 62 RQFLSLMEKPDVDHIEG---LSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEP 118 D D + G + + ++Q +PRS T + D +R +FA + Sbjct: 669 ----------DCDDVFGDGQIDDVVLVDQSPIGRSPRSNPVTYIKAFDEIRSVFAATVQA 718 Query: 119 R 119 R Sbjct: 719 R 719 >UniRef50_C2M987 Excinuclease ABC subunit A n=1 Tax=Porphyromonas uenonis 60-3 RepID=C2M987_9PORP Length = 959 Score = 721 bits (1861), Expect = 0.0, Method: Compositional matrix adjust. Identities = 415/956 (43%), Positives = 565/956 (59%), Gaps = 37/956 (3%) Query: 1 MDKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAY 60 ++ I +RG R +NLK I+L IPR +L+V+TG+SGSGKSSLAFDTLYAEGQRRYV+SLS+Y Sbjct: 20 LNDIIIRGCRVNNLKGIDLDIPRGELVVITGVSGSGKSSLAFDTLYAEGQRRYVDSLSSY 79 Query: 61 ARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRC 120 ARQFL M+KP+ D I+ L PA++IEQ+ S NPRSTVGT +EI DYLR+L ARVG+ Sbjct: 80 ARQFLMRMKKPECDQIKNLPPAVAIEQRVVSRNPRSTVGTSSEIDDYLRVLMARVGKLYS 139 Query: 121 PDHDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARID 180 P + T + +V+ P +L +LA + + L L QGY R ID Sbjct: 140 PISGELVKRHTAADVVEAAHQIPTDSKLYILADLYPPEGRRLIEHLMLLQGQGYNRVLID 199 Query: 181 GEVCDLSDPPKLELQKKHTIEVVVDRFKVR---DDLTQRLAESFETALELSGGTAVVADM 237 V + D EL++ ++++VDR VR D RL +S E AL T + Sbjct: 200 DTVYRIEDVSNKELREAKQVQLIVDRLTVRTGDDSYESRLGDSVEIALYEGRETCALRWQ 259 Query: 238 DDPKAEELL----FSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDR 293 D A FSA F G + E P LF+FN+PAGAC C G G DP+R Sbjct: 260 DSEGAWSSEGRRNFSARFEAD--GRTFTEPTPDLFNFNSPAGACTVCGGFGSILGIDPER 317 Query: 294 VIQNPELSLAGGAIRGW-DRRNFYYFQMLKSLADHYKFDVEAPWGSLSANVHKVVLYGSG 352 VI + LSL G + W ++ + + A + F + P+ L+ ++ +G Sbjct: 318 VIPDDSLSLYEGCVDCWRGAKSSEWAKAFIHEAKRFDFPIHTPYAELTQEQRDLLWHGHE 377 Query: 353 KENIEFKYMNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGT 412 + G+ K+ R LA + C +C G Sbjct: 378 GGGWGKGTLY-------------GIDDYFAMLQKDIYKIQNRVRLAHYRGKSECYACHGG 424 Query: 413 RLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDRLKFLVN 472 RL+ +A I MSI A+ FF + AKIAE+ LKEI +RL+ L + Sbjct: 425 RLKEDALLFTYMGKNFHQIGQMSIREALTFFAQELEDPEEAKIAERPLKEIRNRLRTLDS 484 Query: 473 VGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLI 532 VGL YLTL R + TLSGGE+QRI LA+++G LVG MY+LDEPSIGLH RD +RL+ + Sbjct: 485 VGLGYLTLDRRSNTLSGGESQRINLATRLGNSLVGSMYILDEPSIGLHDRDTDRLISVIK 544 Query: 533 HLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYM 592 LRD GNTVIVVEHDE IRAAD++ID+G AG GGEV+ G I A T Y+ Sbjct: 545 ELRDQGNTVIVVEHDELTIRAADYLIDMGLDAGRLGGEVIYHGKPSDITAETPGYTAAYL 604 Query: 593 SGKRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLIND 652 +G+ +I VPK R P ++ L + NNLK + +P+ T +TGVSGSGKSTLI+D Sbjct: 605 TGREEILVPKHRRPV--QRKLTMHHVHKNNLKGFDVDIPLFNMTVVTGVSGSGKSTLISD 662 Query: 653 TLFPIAQRQLNGATIAEP--APYRDIQG-LEHFDKVIDIDQSPIGRTPRSNPATYTGVFT 709 L QR +N A P R + G ++ ++V+ +DQ+ +GR+ RSNP TY FT Sbjct: 663 LLVEELQRIIN----ARPRETQSRMLTGDVDLVEQVLYVDQNSVGRSTRSNPVTYIDAFT 718 Query: 710 PVRELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGK 769 P+REL+A P ++ GY P FSFN GGRCE C+GDGV++V M F+ DI + CD C+GK Sbjct: 719 PIRELYADQPLAKQMGYKPYFFSFNKEGGRCEVCKGDGVVEVPMQFMTDITLVCDACEGK 778 Query: 770 RYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAVPA-----LARKLQTLMDVGLTYIRLG 824 R+ + LE+ Y G I+++L+MT+++A EFF PA + R L+ L VGL Y++LG Sbjct: 779 RFQKNILEVTYHGVNIYDLLEMTVDQAIEFFTKYPADQTTSIIRLLEGLQRVGLGYLQLG 838 Query: 825 QSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNT 884 Q+++TLSGGE QR+KLA L + TL++ DEPTTGLHF DI LL L DQG++ Sbjct: 839 QNSSTLSGGENQRLKLAYYLGRDHEPHTLFVFDEPTTGLHFHDISTLLAAFRDLIDQGHS 898 Query: 885 IVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLKPML 940 +++IEHN++VIK+AD+I+DLGP+GG GG+++V+GTPE VA C S T +LK L Sbjct: 899 VLIIEHNMEVIKSADYIIDLGPDGGDKGGQLVVAGTPEEVAACPDSITGHYLKEKL 954 Score = 62.8 bits (151), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 60/232 (25%), Positives = 105/232 (45%), Gaps = 36/232 (15%) Query: 600 VPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQ 659 V K+ P N + + G R NNLK + L +P G ITGVSGSGKS+L DTL+ Q Sbjct: 13 VAMKKSPLND---IIIRGCRVNNLKGIDLDIPRGELVVITGVSGSGKSSLAFDTLYAEGQ 69 Query: 660 RQLNGATIAEPAPYR------DIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRE 713 R+ + + + + +++ + I+Q + R PRS T + + +R Sbjct: 70 RRYVDSLSSYARQFLMRMKKPECDQIKNLPPAVAIEQRVVSRNPRSTVGTSSEIDDYLRV 129 Query: 714 LFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVE--MHFLPDIYVPCDQ------ 765 L A V + Y+P R + + I + ++ L D+Y P + Sbjct: 130 LMARV----GKLYSPISGELVKRHTAADVVEAAHQIPTDSKLYILADLYPPEGRRLIEHL 185 Query: 766 --CKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMD 815 +G+ YNR ++ T++ + D++ +E RE A+++Q ++D Sbjct: 186 MLLQGQGYNRVLID-----DTVYRIEDVSNKELRE--------AKQVQLIVD 224 >UniRef50_C6VXN3 Excinuclease ABC, A subunit n=3 Tax=Bacteroidetes RepID=C6VXN3_DYAFD Length = 968 Score = 720 bits (1858), Expect = 0.0, Method: Compositional matrix adjust. Identities = 425/972 (43%), Positives = 593/972 (61%), Gaps = 67/972 (6%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 63 I ++GAR +NLKNI++ IPR+KL+V+TGLSGSGKSSLAFDTL+AEGQR YVESLS+YARQ Sbjct: 23 ILIKGARVNNLKNIDVAIPRNKLVVITGLSGSGKSSLAFDTLFAEGQRMYVESLSSYARQ 82 Query: 64 FLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCPDH 123 FL MEKP+V++I+G+SPAI+IEQK + NPRSTVGT TEI+DYL+LLFAR+G P Sbjct: 83 FLGRMEKPEVEYIKGISPAIAIEQKVNTRNPRSTVGTSTEIYDYLKLLFARIGHTYSPVS 142 Query: 124 DVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARIDGEV 183 + +V+ +V+ +L+ EG R+M+LAP++ + L L S+GY R ++ EV Sbjct: 143 GEIVRKDSVTDVVNYMLAHDEGTRVMILAPLLIRDGRSQIEELTILLSKGYNRIVLNDEV 202 Query: 184 CDLSD---PPKLELQKKHTIEVVVDRFKVR---DDLTQRLAESFETALELSGGTAVVADM 237 + D P Q + + +++DR +R +D RL++S +TA GT V + Sbjct: 203 VSIEDILENPDQFPQAGNRVFILIDRAAIRHDDEDTQYRLSDSVQTAFFEGEGTCTVHIV 262 Query: 238 DDPKAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQN 297 E+ +FS F + G + E LFSFNNP GAC C+G G DPD VI + Sbjct: 263 ---GGEKRVFSDKFE--LDGITFEEPTVNLFSFNNPFGACKRCEGFGKILGIDPDLVIPD 317 Query: 298 PELSLAGGAIRGW--DRRNFYYFQMLKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKEN 355 LS+ GAI W ++ + ++++ + F + P+ L+ V K +L+ + Sbjct: 318 KNLSVYDGAIAPWRTEKMGEWLVPLVRN-GVKFDFPIHRPYKDLTP-VQKELLWTGNQY- 374 Query: 356 IEFKYMNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGTRLR 415 F+G+ + +T R L++F C C G+RLR Sbjct: 375 ------------------FQGINDFVSELESQTHKIQYRVMLSRFRGRTTCPDCRGSRLR 416 Query: 416 REARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNVGL 475 ++A +V + + + M I FF L+L +IA ++L EI RL ++ VGL Sbjct: 417 KDASYVKIGGKSITDLVLMPIQDVSVFFKQLELGDHDRQIARRVLTEIESRLDYMNRVGL 476 Query: 476 NYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLR 535 YLTL+R TLSGGE QRI+LA+ +G+ LVG MY+LDEPSIGLH RD +RL+G L LR Sbjct: 477 GYLTLNRLTSTLSGGEFQRIKLATSLGSALVGSMYILDEPSIGLHPRDTQRLVGVLESLR 536 Query: 536 DLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVP----------- 584 DLGNTVIVVEH+E+ + AAD +IDIGP AG GG VV +G I + Sbjct: 537 DLGNTVIVVEHEEEVMHAADQIIDIGPEAGTGGGHVVFQGNQSDIEELKINGSGAGNSQE 596 Query: 585 ---------------ESLTGQYMSGKRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLT 629 S T ++ G I VP R L++ GAR NNLK++ + Sbjct: 597 GIGSQEVMSSGAGHMRSHTLDFLLGNDSIPVPSVR--RKSLHFLEIKGARENNLKELDVK 654 Query: 630 LPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAEPAPYRDIQG-LEHFDKVIDI 688 +P+ T +TGVSGSGKSTLI L+P R L G + + + G ++ + V I Sbjct: 655 IPLNNLTVVTGVSGSGKSTLIRKILYPALMR-LKGEFSEDVGRFDALTGSIDRIEAVEMI 713 Query: 689 DQSPIGRTPRSNPATYTGVFTPVRELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGV 748 DQ+PIG++ RSNP TY + +R++ + P S+ARGY P FSFNV GGRCE CQG+G Sbjct: 714 DQNPIGKSSRSNPVTYIKAYDYIRQMMSEQPLSKARGYKPSHFSFNVDGGRCEICQGEGE 773 Query: 749 IKVEMHFLPDIYVPCDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFF-DAVPALA 807 +KVEM F+ DIY+ C+ C GKR+ +E E++Y K I E+LDMT++EA +FF + P LA Sbjct: 774 VKVEMQFMADIYLTCEGCNGKRFKQEIQEVRYHDKDIAEILDMTVDEAIDFFRETEPKLA 833 Query: 808 RKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGT--GQTLYILDEPTTGLHF 865 KL L +VGL Y+ LGQS+ TLSGGEAQRVKLA L K + G+TL+I DEPTTGLHF Sbjct: 834 DKLLPLQEVGLGYVGLGQSSNTLSGGEAQRVKLASFLGKGSSNKGKTLFIFDEPTTGLHF 893 Query: 866 ADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVA 925 DI++LL ++ L +QG+++++IEHN++VIK+ADWI+DLGPEGG GG + +GTPE + Sbjct: 894 HDIKKLLKAINALVEQGDSVIIIEHNMEVIKSADWIIDLGPEGGENGGNLTFTGTPEEML 953 Query: 926 ECEASHTARFLK 937 + + ++TA FLK Sbjct: 954 KLDGNYTAEFLK 965 Score = 108 bits (269), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 66/193 (34%), Positives = 112/193 (58%), Gaps = 16/193 (8%) Query: 406 CASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGD 465 C C G R ++E + V + + I DM++ A++FF + K+A+K+L Sbjct: 788 CEGCNGKRFKQEIQEVRYHDKDIAEILDMTVDEAIDFFRETE-----PKLADKLLP---- 838 Query: 466 RLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVG---VMYVLDEPSIGLHQR 522 L VGL Y+ L +S+ TLSGGEAQR++LAS +G G +++ DEP+ GLH Sbjct: 839 ----LQEVGLGYVGLGQSSNTLSGGEAQRVKLASFLGKGSSNKGKTLFIFDEPTTGLHFH 894 Query: 523 DNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMA 582 D ++LL + L + G++VI++EH+ + I++AD +ID+GP G +GG + G E ++ Sbjct: 895 DIKKLLKAINALVEQGDSVIIIEHNMEVIKSADWIIDLGPEGGENGGNLTFTGTPEEMLK 954 Query: 583 VPESLTGQYMSGK 595 + + T +++ K Sbjct: 955 LDGNYTAEFLKEK 967 Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 39/127 (30%), Positives = 65/127 (51%), Gaps = 10/127 (7%) Query: 608 NPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATI 667 +P + + + GAR NNLK++ + +P ITG+SGSGKS+L DTLF QR + Sbjct: 18 DPRQYILIKGARVNNLKNIDVAIPRNKLVVITGLSGSGKSSLAFDTLFAEGQRMYVESLS 77 Query: 668 AEPAPYR------DIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPES 721 + + +++ ++ I I+Q R PRS T T ++ ++ LFA + + Sbjct: 78 SYARQFLGRMEKPEVEYIKGISPAIAIEQKVNTRNPRSTVGTSTEIYDYLKLLFARIGHT 137 Query: 722 RARGYTP 728 Y+P Sbjct: 138 ----YSP 140 >UniRef50_D2QFW0 Excinuclease ABC, A subunit n=2 Tax=Bacteroidetes RepID=D2QFW0_9SPHI Length = 997 Score = 716 bits (1849), Expect = 0.0, Method: Compositional matrix adjust. Identities = 433/1004 (43%), Positives = 591/1004 (58%), Gaps = 101/1004 (10%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 63 I ++GA+ HNLK I++ IPR+KL+V+TGLSGSGKSSLAFDTL+AEGQR YVESLS+YARQ Sbjct: 22 IIIKGAKVHNLKGIDVAIPRNKLVVLTGLSGSGKSSLAFDTLFAEGQRMYVESLSSYARQ 81 Query: 64 FLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCPDH 123 FL MEKP+V++I+G+SPAI+IEQK ++ NPRSTVGT TEI+DYL+LLFAR G P Sbjct: 82 FLGRMEKPEVEYIKGVSPAIAIEQKVSTRNPRSTVGTSTEIYDYLKLLFARSGVTYSPIS 141 Query: 124 DVPLAAQTVSQMVDNVLSQPEG-----KRLMLLAPIIKERKGEHTKTLENLASQGYIRAR 178 + TV+ +V+ + G +R+M++AP+ L L +GY R Sbjct: 142 GHEVKKDTVTDVVNFMYGYEAGPGGAPQRVMIMAPLRIREGRTLAYELNILLQKGYTRIV 201 Query: 179 IDGEVCDLSDPPKLELQ----------------KKHTIEVVVDRFKV--------RDDLT 214 DG D + + LQ ++E++VDR V +D Sbjct: 202 ADGGQDDAASSARQVLQIEDILENEGNYASLFADHASLEILVDRGTVLYDANGNPDEDNQ 261 Query: 215 QRLAESFETALELSGGTAVVADMDDPKAEELLFSANFACPICGYSMRELEPRLFSFNNPA 274 R ++S +TA GT V D E +FS F + G + E LF+FNNP Sbjct: 262 YRFSDSVQTAFSEGEGTCRV---DVVGKESRVFSDKFE--LDGIAFEEPSVNLFTFNNPY 316 Query: 275 GACPTCDGLGVQQYFDPDRVIQNPELSLAGGAIRGWDRRNFYYFQMLKSLADH---YKFD 331 GAC CDG G DPD V+ + LS+ GAI W R + LK L + + F Sbjct: 317 GACRRCDGFGKVLGIDPDLVVPDKNLSVFEGAIAPW-RSEKMSEEFLKPLLKNGIRFDFP 375 Query: 332 VEAPWGSLSANVHKVVLYGSGKENIEFKYMNDRGDTSIRRHPFEGVLHNMERRYKETESS 391 + P+ L+ +++ G+ KY F+G+ N + E+++ Sbjct: 376 IHRPYKDLTPAEQELLWTGN-------KY-------------FDGI--NAFFAFVESQTF 413 Query: 392 AV--REELAKFISNRPCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLA 449 V R L+++ C C G+RLR++A +V V + + M + H FF +L+L Sbjct: 414 KVQYRVMLSRYRGKTTCPECRGSRLRKDAGYVKVGGKSITDLVLMPLTHVTAFFQDLELP 473 Query: 450 GQRAKIAEKILKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVM 509 + ++A +IL EI +RL F+ VGL YLTL+R TLSGGE QRI+LA+ +G+ LVG M Sbjct: 474 AHQQQVANRILIEIRNRLDFMERVGLGYLTLNRLTNTLSGGEYQRIKLATSLGSALVGSM 533 Query: 510 YVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGG 569 Y+LDEPSIGLH RD +RL+ L LRD+GNTVIVVEH+E+ +RAAD +IDIGP AG GG Sbjct: 534 YILDEPSIGLHPRDTQRLVSVLEALRDMGNTVIVVEHEEEVMRAADQLIDIGPDAGSLGG 593 Query: 570 EVVAEG-----------------------------PLEAIMA--VPESLTGQYMSGKRKI 598 ++ +G P +++A S T +++G+ + Sbjct: 594 HLMFQGTWGDIKELGARSEERGVADASGSLHASATPHSSLLAPHSSSSHTIDFLTGRETV 653 Query: 599 EVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIA 658 VP R A ++L GAR NNLKDV + P+ T +TGVSGSGKSTLI L+P Sbjct: 654 PVPTFRRKAT--NFIELKGARENNLKDVDVRFPLNTLTVVTGVSGSGKSTLIRKVLYPAL 711 Query: 659 QRQLNGATIAEPAPYRDIQG-LEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAG 717 RQ G E + + G LE V IDQ+PIG++ RSNP TY + +R++ A Sbjct: 712 MRQ-RGEGTEEAGRFDSLSGSLERISSVEMIDQNPIGKSSRSNPVTYIKAYDYLRQVMAD 770 Query: 718 VPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLE 777 P S++RGY P FSFNV GGRCE CQG+G +K+EM F+ DIY+ C+ C GKR+ +E LE Sbjct: 771 QPVSKSRGYKPSHFSFNVDGGRCEVCQGEGEVKIEMQFMADIYLKCEGCGGKRFKQEVLE 830 Query: 778 IKYKGKTIHEVLDMTIEEAREFFDAVP-ALARKLQTLMDVGLTYIRLGQSATTLSGGEAQ 836 + K I ++LDMT++EA FF V +A KLQ L DVGL YI LGQSA TLSGGEAQ Sbjct: 831 VTLHDKNISDILDMTVDEAIVFFRKVDNKMADKLQPLQDVGLGYIGLGQSANTLSGGEAQ 890 Query: 837 RVKLARELSKR--GTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDV 894 RVKLA L K G L+I DEPTTGLHF DI++LL ++ L DQG+++++IEHN++V Sbjct: 891 RVKLASFLGKGNPNKGSMLFIFDEPTTGLHFHDIRKLLAAINALVDQGDSVIIIEHNMEV 950 Query: 895 IKTADWIVDLGPEGGSGGGEILVSGTPETVAEC-EASHTARFLK 937 IK AD I+D+GPEGG GG I+ +GTPE + + + +HTAR+LK Sbjct: 951 IKNADHIIDIGPEGGETGGYIMFTGTPEEMVKLDDGNHTARYLK 994 Score = 55.8 bits (133), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 38/127 (29%), Positives = 65/127 (51%), Gaps = 8/127 (6%) Query: 608 NPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATI 667 +P++ + + GA+ +NLK + + +P +TG+SGSGKS+L DTLF QR + Sbjct: 17 DPKQFIIIKGAKVHNLKGIDVAIPRNKLVVLTGLSGSGKSSLAFDTLFAEGQRMYVESLS 76 Query: 668 AEPAPYR------DIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFA--GVP 719 + + +++ ++ I I+Q R PRS T T ++ ++ LFA GV Sbjct: 77 SYARQFLGRMEKPEVEYIKGVSPAIAIEQKVSTRNPRSTVGTSTEIYDYLKLLFARSGVT 136 Query: 720 ESRARGY 726 S G+ Sbjct: 137 YSPISGH 143 >UniRef50_D2R1K2 Excinuclease ABC, A subunit n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2R1K2_9PLAN Length = 966 Score = 689 bits (1777), Expect = 0.0, Method: Compositional matrix adjust. Identities = 391/958 (40%), Positives = 560/958 (58%), Gaps = 48/958 (5%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 63 IE+RG HNL+ ++L +P KL+V G+SGSGK+SLA DTLYAEGQRRY+ES S Y RQ Sbjct: 19 IELRGVEVHNLRMVDLDVPLGKLVVFCGVSGSGKTSLALDTLYAEGQRRYLESFSVYTRQ 78 Query: 64 FLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCPDH 123 FL +EKPDV+ I+ L AI++ + + RST+GT TE DYLRLL A+V E C Sbjct: 79 FLQKLEKPDVERIDNLPAAIAVSHDDAARSSRSTIGTATETLDYLRLLMAKVAELTCHGC 138 Query: 124 DVPLAAQTVSQMVDNVLSQPEGKRLML--LAPIIKERKGEHTKTLE-NLASQGYIRARID 180 + + S + V S +LML P+ +G +TL +L +G+ R + Sbjct: 139 GKSIRKASASTIAAEVQSLDPSTKLMLGFFEPV---PEGIALETLAASLRGRGFSRGVV- 194 Query: 181 GEVCDLSD--PPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAV----- 233 GE + D P ++ + V+VDR QRL +S ET+L GG V Sbjct: 195 GETSFMLDTIPSEMVSSSASELGVIVDRI-TPTVAQQRLLDSLETSLTSGGGACVLWRAV 253 Query: 234 ---------VADMDDPKAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLG 284 V +D + + L +S C C + P+LFSFN+P GAC C+G G Sbjct: 254 RDDETSTPDVVVIDGQRWQRLDYSQRLQCRACQIVYSDPTPQLFSFNSPLGACNVCEGFG 313 Query: 285 VQQYFDPDRVIQNPELSLAGGAIRGWDRRNFYY-FQMLKSLADHYKFDVEAPWGSLSANV 343 D ++ + S+ GAI W+ + + Q L +LA YK V+ P+ L+ Sbjct: 314 STIDLDDALIVPDRSKSIREGAIAPWNSPAYLHELQELLALAPDYKLPVDVPYSELTEKH 373 Query: 344 HKVVLYGSGKENIEFKYMNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISN 403 +++ G + + G +ERR + +R L+++ S+ Sbjct: 374 KQLIREGVPERDF---------------GGLRGFFAWLERRKYKMH---IRVFLSRWRSS 415 Query: 404 RPCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEI 463 + C +C G RL E+ + + I+ + I A E L L+ + K+A +L +I Sbjct: 416 KLCHACHGARLNAESLSWRIAGKNISEITALRIDEAAELLAALSLSATQKKLARVMLDQI 475 Query: 464 GDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRD 523 RL FL VGL YL L R+ TLSGGEAQR+ L S +G+ LV ++YVLDEPS+GLH D Sbjct: 476 QSRLAFLRQVGLGYLKLDRTLRTLSGGEAQRVALTSALGSSLVNMLYVLDEPSVGLHPSD 535 Query: 524 NERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAV 583 ERLL + LRD GNTV++VEH+E +R +D ++++GPGAG GG + G L+ ++A Sbjct: 536 VERLLVAVKGLRDRGNTVVLVEHEEQMLRESDWLVEVGPGAGDAGGNITFSGELDEMLA- 594 Query: 584 PESLTGQYMSGKRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSG 643 ++TG +++G+R + +P R A LKL+GARGNNLK++T+ P+G+ +TGVSG Sbjct: 595 GTTVTGDFLAGRRGVAIPAARRTAT-RGWLKLSGARGNNLKNLTVEFPLGVMCLVTGVSG 653 Query: 644 SGKSTLINDTLF-PIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPA 702 SGKSTL+ +TL+ + +R+ P Y D+ G D VI +DQSPIGR+ RSNP Sbjct: 654 SGKSTLVQETLYGALCKRKRKDCD--PPLDYDDVVGDGQIDDVILVDQSPIGRSGRSNPV 711 Query: 703 TYTGVFTPVRELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVP 762 TY F P+R +FA ++R YT G FSFNV GGRC+ACQG+G ++++M FL D+ Sbjct: 712 TYIKAFDPIRAVFAEQVDARTHNYTAGHFSFNVDGGRCDACQGEGFLRIDMQFLADVLRK 771 Query: 763 CDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIR 822 C C G RY +E L++KY+G++I EVL+MT EA FF P + KL+ L+DVGL Y+R Sbjct: 772 CPACGGSRYRKEILQVKYRGRSIAEVLEMTAREAFSFFRGQPKVQGKLKQLIDVGLDYLR 831 Query: 823 LGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQG 882 LGQ A+TLS GEAQR+KLA LS+ +TL+ILDEPTTGLHFAD+ +LLD L D G Sbjct: 832 LGQPASTLSSGEAQRLKLAAFLSEASRNRTLFILDEPTTGLHFADVVKLLDCFEALLDVG 891 Query: 883 NTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLKPML 940 ++++++EHNL +++ AD+++DLGP G GG ++ GTPE VA S T ++L L Sbjct: 892 HSLIIVEHNLQLMRAADYLIDLGPGAGDAGGTVIAQGTPEQVATSPLSLTGKYLAASL 949 Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 35/126 (27%), Positives = 58/126 (46%), Gaps = 6/126 (4%) Query: 606 PANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQ---- 661 P+ ++ ++L G +NL+ V L +P+G GVSGSGK++L DTL+ QR+ Sbjct: 12 PSTGDRSIELRGVEVHNLRMVDLDVPLGKLVVFCGVSGSGKTSLALDTLYAEGQRRYLES 71 Query: 662 --LNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVP 719 + + D++ +++ I + R+ RS T T +R L A V Sbjct: 72 FSVYTRQFLQKLEKPDVERIDNLPAAIAVSHDDAARSSRSTIGTATETLDYLRLLMAKVA 131 Query: 720 ESRARG 725 E G Sbjct: 132 ELTCHG 137 >UniRef50_B5YG61 Excinuclease ABC, A subunit n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YG61_THEYD Length = 915 Score = 681 bits (1758), Expect = 0.0, Method: Compositional matrix adjust. Identities = 376/949 (39%), Positives = 567/949 (59%), Gaps = 53/949 (5%) Query: 2 DKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYA 61 D + ++GAR +NLKNI+++IP +KL V+TG+SGSGKSSLAFDT+YAEGQ R++E +S+YA Sbjct: 8 DYLIIKGARQNNLKNIDVIIPHNKLTVITGISGSGKSSLAFDTIYAEGQWRFIECMSSYA 67 Query: 62 RQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCP 121 R F+ + +PDVD I+ L P I++EQ++ R+TVGT TEI+DYLR++F++V +P CP Sbjct: 68 RVFIEKLPRPDVDLIDNLRPTIALEQRNPIKGSRATVGTHTEIYDYLRIIFSKVAKPVCP 127 Query: 122 DHDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARIDG 181 + + + S++ +L + GKR ++ E ++ E L G+ R I Sbjct: 128 KCNEEIKSWNSSKLTQELLEKYAGKRAFIVF--------ETDESKEKLIQLGFSRVLI-- 177 Query: 182 EVCDLSDPPKLELQK--KHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVADMDD 239 + ++P EL K + V+VDR + + RL +S E A + G + ++D Sbjct: 178 --FENNNPIVKELTKSDEKLKMVIVDRLVLSN--ASRLNDSLEIAFRM--GQVKIYIVED 231 Query: 240 PKAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPE 299 A L F + CP CG E P LFSFN+P GACP C G G +D ++ + E Sbjct: 232 --ANLLHFFSEPICPYCGMKTSEPSPLLFSFNHPHGACPQCKGFGYLLKYDESIIVPDKE 289 Query: 300 LSLAGGAIRGWDRRNFYYF--QMLKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKENIE 357 LSLA GAI W++ ++ Q+LK A +V P+ LS ++ G+ Sbjct: 290 LSLAEGAIEIWEKPTLKWWKQQLLKG-AKLSGINVNIPYRMLSQEQKNLIFTGN------ 342 Query: 358 FKYMNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGTRLRRE 417 F GV +E K+ VR L++ C C+G RL+ Sbjct: 343 --------------QYFYGVNDFLEELEKKRYKVHVRVFLSRIRKPVVCPHCKGKRLKDT 388 Query: 418 ARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNVGLNY 477 A + + I+ MSI E+ +LKL+ + AKI+E+ L++I ++L+FL VGL+Y Sbjct: 389 ALMFKINGLDIGDINFMSISQLKEWIQSLKLSQEEAKISEEPLRQISEKLEFLERVGLSY 448 Query: 478 LTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDL 537 LTL R +TLSGGE QR+ +++Q+ L +YVLDEP++GLH +D +R++ L L + Sbjct: 449 LTLDRQIKTLSGGEYQRLNISNQLSNRLTATLYVLDEPTVGLHPKDTDRIIAVLKDLTEY 508 Query: 538 GNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRK 597 GNTV+VVEHD+D I+ AD +I++GPG G GGEVV G L+ + + +++T Y+ Sbjct: 509 GNTVVVVEHDKDVIKNADWLIELGPGGGSLGGEVVYSGELKKFLNL-DTVTANYLKKSEC 567 Query: 598 IEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPI 657 + + K + + L A G+NLK++T+ P+ T +TG+SGSGKS+L+ DT + Sbjct: 568 LAI--KNYKNLFKNFITLKNAHGHNLKNITVHFPMNALTVVTGISGSGKSSLVVDTFYKA 625 Query: 658 AQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAG 717 QL G + + DI+G+++ + IDQSPIGRTP+S P TY G++ +R++FA Sbjct: 626 VANQL-GIDTQKALAFEDIEGVKNIKAIKLIDQSPIGRTPKSMPVTYLGLYGKIRDIFAS 684 Query: 718 VPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLE 777 E++ RG++ G FS N G C C+G+G I+V+M F D+++PC+ C+GKR+ +E LE Sbjct: 685 QKEAKLRGFSSGAFSVNSPQGYCPQCKGEGYIRVQMFFFEDLFLPCEDCEGKRFRKEVLE 744 Query: 778 IKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQR 837 +KYK K IHEVL M+ +EA EFF L K+ + ++GL Y+RLGQ ATTLSGGEAQR Sbjct: 745 VKYKDKNIHEVLSMSFDEAYEFFYEDNILREKINLIRELGLGYLRLGQPATTLSGGEAQR 804 Query: 838 VKLARELSKRGTGQ------TLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHN 891 +K+ E+ TG+ +YILDEPT GLH+ DI++ L+++ +L D+ T+++IEHN Sbjct: 805 IKICEEILSSITGKKSTLKGVVYILDEPTVGLHYEDIKKFLNIVKRLLDKSATVIIIEHN 864 Query: 892 LDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLKPML 940 L VI A WI+DLGPEGG GG +L G + E S+TA++L+ L Sbjct: 865 LQVISEAQWIIDLGPEGGDKGGHLLYEGDLTEFLKLENSYTAKYLREYL 913 Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 35/115 (30%), Positives = 59/115 (51%), Gaps = 6/115 (5%) Query: 610 EKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQL------N 663 E L + GAR NNLK++ + +P T ITG+SGSGKS+L DT++ Q + Sbjct: 7 EDYLIIKGARQNNLKNIDVIIPHNKLTVITGISGSGKSSLAFDTIYAEGQWRFIECMSSY 66 Query: 664 GATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGV 718 E P D+ +++ I ++Q + R+ T+T ++ +R +F+ V Sbjct: 67 ARVFIEKLPRPDVDLIDNLRPTIALEQRNPIKGSRATVGTHTEIYDYLRIIFSKV 121 >UniRef50_Q0A6L0 Excinuclease ABC, A subunit n=4 Tax=Bacteria RepID=Q0A6L0_ALHEH Length = 2175 Score = 670 bits (1729), Expect = 0.0, Method: Compositional matrix adjust. Identities = 406/1018 (39%), Positives = 572/1018 (56%), Gaps = 91/1018 (8%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 63 I++ AR HNLK +++ IPR++L V+TGLSGSGKS++AFD L+ EGQRRY+ESL+AYARQ Sbjct: 1165 IDIHHAREHNLKGVDIRIPRNRLTVITGLSGSGKSTVAFDILFNEGQRRYLESLNAYARQ 1224 Query: 64 FLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCPDH 123 F+ +PDVD +EG+ P ++IEQ+++ +STV T+TE+H +LRLL+AR+G CP Sbjct: 1225 FVQPAARPDVDSVEGIPPTVAIEQRTSRGGRKSTVATLTELHHFLRLLYARLGTWHCPAC 1284 Query: 124 DVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARIDGEV 183 VP+ AQT + +L + G+ L LLAP++ RKG + + A +G +DGE Sbjct: 1285 QVPIQAQTPEAIHAQLLREHRGETLHLLAPMVSGRKGIYKELARWAAGKGVGHLYVDGEF 1344 Query: 184 CDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGT------------ 231 +D PKL+ ++H I++ V ++ + Q L ++ ALE G Sbjct: 1345 LPTADWPKLDRYREHDIDLPVAELRIEPENAQPLRQAIARALEQGKGVLRILTAERTLQT 1404 Query: 232 --------AVVADMDDPKAEELLF-SANFACPIC--------GYS---------MRELEP 265 + D+P + + S + CP C G+S RE E Sbjct: 1405 LSTERACPSCQRSFDEPDPRQFSYNSPHGWCPTCYGTGEVLEGFSDEDSGEERHWRETES 1464 Query: 266 RLFSFNNPAGACPTCDG--LGVQQYFDPDRVIQNPELS-LAGGAIRGWDRRNFYYFQMLK 322 + P CPTC+G L + + PELS L R W F + Sbjct: 1465 DDDALPAP---CPTCNGTRLNAEARAVTFQGRTLPELSALTVREARAW----FRVMRAHS 1517 Query: 323 SLADHYKFDVEAPWGSLSANVHKV-VLYGSGKENIEFKYMNDRGDTSIRRHPFE------ 375 + +V+ P + V G+ RG+ R P + Sbjct: 1518 PQPGPKEIEVDDPEAAERGGGRSTPVPSGARPAGGSGPKGGRRGEAETDRCPVDTDPAER 1577 Query: 376 ---GVLHNMERRYKET--ESSAVREELAKFISNRPCASCEGTRLRREARHV-YVENTPLP 429 G L +++ E +A + +S P + E R AR + + P+ Sbjct: 1578 AGHGWLAPALPAAQDSAAEQAATDRQARDGLSVGPASGTE-KRSSAPARSAPHPASNPVE 1636 Query: 430 AISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTLSRSAETLSG 489 + G + L L + A IA +L EI RL+FL +VGL YL+L R+A TLSG Sbjct: 1637 VAPPNAHGPGNDNAEPLALTDREATIARDVLPEIHHRLRFLEDVGLGYLSLDRAAPTLSG 1696 Query: 490 GEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDED 549 GEAQRIRLA+Q+G+ L GV YV+DEP+IGLH RDN LL L L GNT++VVEHDED Sbjct: 1697 GEAQRIRLAAQLGSNLQGVCYVMDEPTIGLHPRDNRLLLDVLARLEGKGNTIVVVEHDED 1756 Query: 550 AIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMS--------GKRKI--- 598 IR A+H+ID+GPGAG++GG VVA G +E ++ P S+TG+Y+ G+R+ Sbjct: 1757 TIRRAEHIIDLGPGAGINGGRVVAAGTVEQLLQHPRSITGRYLRHPLHHPLRGQRRTVSL 1816 Query: 599 ------EVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLIND 652 P+ PA VL L +NL+ L LP+G +TGVSGSGKS+LI Sbjct: 1817 ATTPAGSHPQPTTPAE-HDVLTLHAPTLHNLQGHDLHLPLGRLMVVTGVSGSGKSSLIRG 1875 Query: 653 TLFPIAQRQLNGATIAEPAPYRDIQGLEHF---DKVIDIDQSPIGRTPRSNPATYTGVFT 709 L P +R L+ P GL+ + D+V+++DQ+PIG+TPRS PATY G + Sbjct: 1876 VLKPALKRLLSRKRDQATPPLPHCAGLDGWQAVDRVLEVDQTPIGKTPRSCPATYIGFWD 1935 Query: 710 PVRELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGK 769 +R+L+AG E+ RGY PGRFSFN + GRC C G GV ++EM+FLPD+ VPC+ C G Sbjct: 1936 DIRKLYAGTQEASLRGYGPGRFSFNTKDGRCPDCDGQGVRRIEMNFLPDVTVPCETCHGL 1995 Query: 770 RYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATT 829 R+ RETL +++KG+ I +VL+M++EEA FF A P + L L VGL Y+ LGQ++ T Sbjct: 1996 RFTRETLAVEWKGRHIGDVLNMSVEEATAFFAAQPRIHHPLTLLEAVGLGYLTLGQASPT 2055 Query: 830 LSGGEAQRVKLARELSK-------RGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQG 882 LSGGEAQR+KL EL+K + T TLY+LDEPT GLH AD+++L+D L +L D G Sbjct: 2056 LSGGEAQRIKLVTELAKARPDLRAQRTPHTLYVLDEPTVGLHMADVERLIDALQRLVDAG 2115 Query: 883 NTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLKPML 940 +T+VVIEHNLD+I ADW+VD+GPEGG GG ++ +G PE VA ++ T RFL +L Sbjct: 2116 HTVVVIEHNLDLIAEADWVVDIGPEGGDAGGRVVAAGPPEAVA-AGSTATGRFLAEVL 2172 Score = 362 bits (929), Expect = 4e-98, Method: Compositional matrix adjust. Identities = 239/639 (37%), Positives = 335/639 (52%), Gaps = 65/639 (10%) Query: 2 DKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYA 61 D I VRGAR +NL+ +L IP +L+V+TG+SGSGKSSLAFDT+YAEGQRRYVE+ S YA Sbjct: 4 DCIRVRGARQNNLRGFDLDIPLGELVVITGVSGSGKSSLAFDTVYAEGQRRYVETFSPYA 63 Query: 62 RQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCP 121 RQFL M++P VD I+G+ PAI+I+Q + RSTVGT+TE++D+L+LLFAR + C Sbjct: 64 RQFLDRMDRPAVDRIDGVLPAIAIDQTNPVRTSRSTVGTMTELNDHLKLLFARTAQLYCG 123 Query: 122 DHDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARIDG 181 + T + +L+ G+R M+ A + +K E LA QGY RI G Sbjct: 124 GCGKRVQRDTAEGVAARLLAGHAGERAMVTARVAIPKKSSADTLRELLAGQGYT--RIHG 181 Query: 182 EVCDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVADMDDPK 241 E + H +EVV DR ++ D RL E+ E+ L+L G V +D+ + Sbjct: 182 E------------DRTH-LEVVTDRIRLVPDRRDRLVEALESGLKLGRGHIQVRLLDENR 228 Query: 242 --AEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPE 299 + L +SA+ C C + P LFSFN+P GAC TC G G D VI + Sbjct: 229 EPGKPLRYSADLHCADCDIHYDDPTPGLFSFNSPVGACETCRGFGRVMGIDYRLVIPDDA 288 Query: 300 LSLAGGAIRGWDR-RNFYYFQMLKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKENIEF 358 LSL GAI+ + R+ L A + P+ L + ++ G GK N Sbjct: 289 LSLEAGAIKPFQSGRSAECQDDLLFHARRRGVATDIPFRDLPEADRQWIIQGEGKFNGRK 348 Query: 359 KYMNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGTRLR--- 415 Y D G +ER+ + VR L+++ S PC C G RL+ Sbjct: 349 WYGVD------------GYFQYLERKSYKMH---VRVLLSRYRSYDPCPDCHGARLKPGA 393 Query: 416 ----------------REARH-VYVENTP------LPAIS-----DMSIGHAMEFFNNLK 447 R RH + P LP + + + FF ++ Sbjct: 394 LLWRIGNHEDSDAVIDRAERHRPHGATLPEHALHGLPGLHLHDVLTLPLDRCARFFQDIH 453 Query: 448 LAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVG 507 L + AE +L+ I +RL +L VGL YLTL R + TLSGGE QRI L + +G LV Sbjct: 454 LPAPLDEAAEILLEGIRNRLTYLNTVGLGYLTLDRQSRTLSGGEVQRINLTTALGTALVN 513 Query: 508 VMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVH 567 ++VLDEPSIGLH RD +R++ + LRD GN+++VVEHD ++AAD +IDIGPG G Sbjct: 514 TLFVLDEPSIGLHPRDIDRIVTVMHRLRDAGNSLLVVEHDPAVMQAADRLIDIGPGPGER 573 Query: 568 GGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEVPKKRVP 606 GG++ G ++ SLT Y++G+R++ VP P Sbjct: 574 GGQITFNGTPAELLRTENSLTADYLTGRRQV-VPTNARP 611 Score = 313 bits (803), Expect = 1e-83, Method: Compositional matrix adjust. Identities = 167/353 (47%), Positives = 227/353 (64%), Gaps = 24/353 (6%) Query: 605 VPANPEKVLKLTGARGNNLKDVTLTLPVG-LFTCITGVSGSGKSTLINDTLF-PIAQRQL 662 +P + KV + GA +NL+ +T+ +PV C+TGVSGSGKSTL+ D L +A+R+ Sbjct: 778 LPPDTPKV-TIQGATEHNLQHLTVEIPVHPALVCLTGVSGSGKSTLMRDILHNELARRK- 835 Query: 663 NGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESR 722 G P ++ + G EH D V+ +DQSPIG+T RSNPA+YTG F P+R+ +A P +R Sbjct: 836 -GHPGDPPGAFQTLTGDEHIDNVVLVDQSPIGKTTRSNPASYTGAFEPIRKAYAAEPLAR 894 Query: 723 ARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKY-- 780 R YTPG FSFN GRC C G+G VEM FL D+Y+ C C G RY E LEI+ Sbjct: 895 ERQYTPGVFSFNSGKGRCPTCGGNGFEHVEMQFLSDVYLRCPDCNGSRYRPEILEIQRLP 954 Query: 781 -----------KGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATT 829 + I E+LD+T+++A EFF PA+ R L+ L VGL Y++LGQ T Sbjct: 955 DPGADLGTAGDGPRHIAEILDLTVDQATEFFRTTPAVLRSLEPLQAVGLGYLKLGQPVPT 1014 Query: 830 LSGGEAQRVKLARELSK-----RGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNT 884 LSGGEAQR+KLA L+K + + L++ DEPTTGLHF D+ LL +L+D+G+ Sbjct: 1015 LSGGEAQRLKLAGHLAKTSGRRKQQQRLLFLFDEPTTGLHFHDVAVLLSAFRRLQDEGHA 1074 Query: 885 IVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETV-AECEASHTARFL 936 ++VIEHNLDV++ ADWI+DLGPEGG GG ++ +GTPE + A+ + SHT R L Sbjct: 1075 LLVIEHNLDVMRAADWIIDLGPEGGDRGGRLVCTGTPEQIMAQSDLSHTGRAL 1127 Score = 132 bits (332), Expect = 7e-29, Method: Compositional matrix adjust. Identities = 112/357 (31%), Positives = 166/357 (46%), Gaps = 63/357 (17%) Query: 406 CASCEGTRLRREARHVYVENTPLPA---------------ISDMSIGHAMEFFNNLKLAG 450 C C G+R R E + ++ P P I D+++ A EFF Sbjct: 935 CPDCNGSRYRPEI--LEIQRLPDPGADLGTAGDGPRHIAEILDLTVDQATEFF------- 985 Query: 451 QRAKIAEKILKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVG--- 507 + +L+ L+ L VGL YL L + TLSGGEAQR++LA + A G Sbjct: 986 ---RTTPAVLRS----LEPLQAVGLGYLKLGQPVPTLSGGEAQRLKLAGHL-AKTSGRRK 1037 Query: 508 ----VMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPG 563 ++++ DEP+ GLH D LL L+D G+ ++V+EH+ D +RAAD +ID+GP Sbjct: 1038 QQQRLLFLFDEPTTGLHFHDVAVLLSAFRRLQDEGHALLVIEHNLDVMRAADWIIDLGPE 1097 Query: 564 AGVHGGEVVAEGPLEAIMAVPE-SLTGQYMSG--------KRKIEVPKKRVPANP----- 609 G GG +V G E IMA + S TG+ ++ + E + P Sbjct: 1098 GGDRGGRLVCTGTPEQIMAQSDLSHTGRALAEYTGALERLRTTAEASEGAASGEPGPGMS 1157 Query: 610 ----EKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQ---- 661 + + + AR +NLK V + +P T ITG+SGSGKST+ D LF QR+ Sbjct: 1158 GRGTQHYIDIHHAREHNLKGVDIRIPRNRLTVITGLSGSGKSTVAFDILFNEGQRRYLES 1217 Query: 662 LNGAT--IAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFA 716 LN +PA D+ +E + I+Q +S AT T + +R L+A Sbjct: 1218 LNAYARQFVQPAARPDVDSVEGIPPTVAIEQRTSRGGRKSTVATLTELHHFLRLLYA 1274 Score = 114 bits (285), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 66/171 (38%), Positives = 100/171 (58%), Gaps = 19/171 (11%) Query: 782 GKTIHEVLDMTIEEAREFFDAV--PA------------LARKLQTLMDVGLTYIRLGQSA 827 G +H+VL + ++ FF + PA + +L L VGL Y+ L + + Sbjct: 431 GLHLHDVLTLPLDRCARFFQDIHLPAPLDEAAEILLEGIRNRLTYLNTVGLGYLTLDRQS 490 Query: 828 TTLSGGEAQRVKLARELSKRGTG--QTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTI 885 TLSGGE QR+ L L GT TL++LDEP+ GLH DI +++ V+H+LRD GN++ Sbjct: 491 RTLSGGEVQRINLTTAL---GTALVNTLFVLDEPSIGLHPRDIDRIVTVMHRLRDAGNSL 547 Query: 886 VVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFL 936 +V+EH+ V++ AD ++D+GP G GG+I +GTP + E S TA +L Sbjct: 548 LVVEHDPAVMQAADRLIDIGPGPGERGGQITFNGTPAELLRTENSLTADYL 598 Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 42/115 (36%), Positives = 60/115 (52%), Gaps = 14/115 (12%) Query: 612 VLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAEPA 671 +++ GAR NNL+ L +P+G ITGVSGSGKS+L DT++ QR+ + + Sbjct: 5 CIRVRGARQNNLRGFDLDIPLGELVVITGVSGSGKSSLAFDTVYAEGQRRY----VETFS 60 Query: 672 PYR-------DIQGLEHFDKV---IDIDQSPIGRTPRSNPATYTGVFTPVRELFA 716 PY D ++ D V I IDQ+ RT RS T T + ++ LFA Sbjct: 61 PYARQFLDRMDRPAVDRIDGVLPAIAIDQTNPVRTSRSTVGTMTELNDHLKLLFA 115 Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust. Identities = 34/107 (31%), Positives = 54/107 (50%), Gaps = 12/107 (11%) Query: 3 KIEVRGARTHNLKNINLVIP-RDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYA 61 K+ ++GA HNL+++ + IP L+ +TG+SGSGKS+L D L+ E RR Sbjct: 784 KVTIQGATEHNLQHLTVEIPVHPALVCLTGVSGSGKSTLMRDILHNELARRKGHPGDPPG 843 Query: 62 RQFLSLMEKPDVDHIEGLSPAISIEQ----KSTSHNPRSTVGTITEI 104 F +L +D++ + ++Q K+T NP S G I Sbjct: 844 -AFQTLTGDEHIDNV------VLVDQSPIGKTTRSNPASYTGAFEPI 883 Score = 44.7 bits (104), Expect = 0.019, Method: Compositional matrix adjust. Identities = 41/146 (28%), Positives = 59/146 (40%), Gaps = 32/146 (21%) Query: 2 DKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYA 61 D + + HNL+ +L +P +L+VVTG+SGSGKSSL L + ++ L + Sbjct: 1834 DVLTLHAPTLHNLQGHDLHLPLGRLMVVTGVSGSGKSSLIRGVL-----KPALKRLLSRK 1888 Query: 62 RQFLSLMEKPDVDHIEGLSP------AISIEQKSTSHNPRSTVGTITEIHDYLRLLFARV 115 R P + H GL + ++Q PRS T D +R L+A Sbjct: 1889 RD----QATPPLPHCAGLDGWQAVDRVLEVDQTPIGKTPRSCPATYIGFWDDIRKLYAGT 1944 Query: 116 GEP-----------------RCPDHD 124 E RCPD D Sbjct: 1945 QEASLRGYGPGRFSFNTKDGRCPDCD 1970 >UniRef50_B2UPV5 Excinuclease ABC, A subunit n=5 Tax=Bacteria RepID=B2UPV5_AKKM8 Length = 1840 Score = 664 bits (1714), Expect = 0.0, Method: Compositional matrix adjust. Identities = 396/957 (41%), Positives = 566/957 (59%), Gaps = 41/957 (4%) Query: 3 KIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYAR 62 +I +RGAR HNL+N+++ IP +L VVTG SGSGK+SLA TLYAEGQRRY+E+ S Y R Sbjct: 8 RIRIRGAREHNLQNVDVDIPLGRLTVVTGPSGSGKTSLAMHTLYAEGQRRYMETFSPYVR 67 Query: 63 QFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCPD 122 QF+ M+KPDVD +E + PAI++ Q+++ RSTVGT+T ++DY + +FAR+ P+ Sbjct: 68 QFMDRMDKPDVDAVENILPAIALHQRNSVRTSRSTVGTMTGLNDYWKFVFARLAVGIDPE 127 Query: 123 HDVPLAAQTVSQMVDNVLSQ-PEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARIDG 181 + +T + + + S+ P G +M+ + + + NL +QGY+RA G Sbjct: 128 TGREIKPETPGTIDEKLHSEFPAGTEVMVCLEVARPESVDLPSLKRNLVAQGYLRAFAHG 187 Query: 182 EVCDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTA-VVADMDDP 240 E+ L D L++ + VV DR ++ +D +R E+ ETA+ L GG A V+ +D Sbjct: 188 EILRLEDE-DWTLEEGEPLLVVQDRVRLSEDQRERRLEALETAMRLGGGVAHVIPRVDGV 246 Query: 241 KAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPEL 300 L F ++ + + E P LFSFN+P GACP C G G D +R I+ PEL Sbjct: 247 WLSALKFRGDW------HPLMEPRPGLFSFNSPLGACPECRGYGRVITIDYNRCIR-PEL 299 Query: 301 SLAGGAIRGWDRRNFYYFQMLKSLADHY-----KFDVEAPWGSLSANVHKVVLYGSGKEN 355 S+ GAI ++ + + + L + K ++ PW L +LYG G + Sbjct: 300 SVQDGAIHIFEGDGKVFSECKRDLMRGWRKNARKVRLDVPWKDLKQWERDWLLYGDGDDP 359 Query: 356 IEFKYMNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGTRLR 415 E M ++G + G +E R T VR L++F + + C SC G RLR Sbjct: 360 DE---MYEQG----LWYGIAGFFKYLESR---THKMHVRVYLSRFRTYQECPSCHGLRLR 409 Query: 416 REARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKI---AEKILKEIGDRLKFLVN 472 EA V +P +S M + + + + + RA + + E+ RL++L Sbjct: 410 PEALQFKVGGKSMPELSSMPMDELLVWVD--RYVTPRADEDPGLKHAVAELRSRLEYLNE 467 Query: 473 VGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLI 532 VGL YLT RS +LSGGE +R+ L + +GA L ++VLDEP++GLH RD RL+ + Sbjct: 468 VGLGYLTSDRSTRSLSGGEIERVSLTTCLGASLTDTLFVLDEPTVGLHPRDTSRLISAMN 527 Query: 533 HLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYM 592 L+ GNT++VVEH+E +RAAD ++D+GPG+G GG +V G I + ESLTG ++ Sbjct: 528 RLKKRGNTLVVVEHEEAVMRAADCLVDMGPGSGREGGRLVYSGMPARIGEIEESLTGAFL 587 Query: 593 SGKRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLIND 652 SG+R+I VPK+R P + L ++GA +NL+ + + +P+GLFTC+TGVSGSGKSTL +D Sbjct: 588 SGRRRIAVPKRR--RKPRQFLTVSGATRHNLRKLDVKVPLGLFTCLTGVSGSGKSTLAHD 645 Query: 653 TLFPIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVR 712 L+ A + EPA + I+G EH D+V+ +DQSPI RTPRS PA Y GVF +R Sbjct: 646 VLYLNALVEKGAVCEEEPARVKSIKGWEHLDEVVMVDQSPIVRTPRSTPAVYAGVFEEIR 705 Query: 713 ELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYN 772 LFA +RARG PG FSFN GRC C G G KVEM FL DI+V C C G RY Sbjct: 706 SLFAETETARARGMKPGFFSFNSGDGRCPRCMGMGSEKVEMQFLSDIFVQCPLCHGSRYG 765 Query: 773 RETLEIKYKGKTIHEVLDMTIEEAREFFDA-----VPALARKLQTLMDVGLTYIRLGQSA 827 E L + G+ I +VL MT+ A E F A +A KL L VGL ++ LGQ Sbjct: 766 SEVLSVYRDGRNIADVLGMTVAAALECFSAEKGAKASRIASKLGVLQRVGLGHLTLGQPL 825 Query: 828 TTLSGGEAQRVKLAR-ELSKRGTG---QTLYILDEPTTGLHFADIQQLLDVLHKLRDQGN 883 TLSGGE QR+KLA+ L + G+G + ILDEP TGLHFADI+ LL V +L +QG+ Sbjct: 826 NTLSGGENQRLKLAKILLDQIGSGANSSKMLILDEPGTGLHFADIEVLLAVFRELVEQGH 885 Query: 884 TIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLKPML 940 T++VIEHN + IK+AD+++DLGPEGG+GGG ++ +GTPE + +T ++L+ +L Sbjct: 886 TLLVIEHNPEFIKSADYVIDLGPEGGAGGGHVVATGTPEEIVAAGKGYTGKYLREVL 942 Score = 489 bits (1258), Expect = e-136, Method: Compositional matrix adjust. Identities = 255/550 (46%), Positives = 357/550 (64%), Gaps = 20/550 (3%) Query: 406 CASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGD 465 C +C G RL AR V ++ I+ + A E + + A IA ++ EI Sbjct: 1286 CPACRGVRLNEFARAVRLQGVTPGDIASLPAVAAAELVKGWQFEREEALIARDVVAEITQ 1345 Query: 466 RLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNE 525 RL FL VGL YL+L RSA TLSGGE QRIRLASQ+G+ L GV+YVLDEP+IGLH RDNE Sbjct: 1346 RLNFLQRVGLGYLSLDRSATTLSGGETQRIRLASQLGSHLRGVLYVLDEPTIGLHPRDNE 1405 Query: 526 RLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPE 585 LLGTL L+ GNT++VVEHDED +R ADH++D+GPGAG+HGG ++A+G E + A+P+ Sbjct: 1406 LLLGTLDELKRRGNTLLVVEHDEDTMRRADHIVDMGPGAGIHGGRIMAQGTFEELAAMPD 1465 Query: 586 SLTGQYMSGKRK--IEVPKKRVPANPEK--VLKLTGARGNNLKDVTLTLPVGLFTCITGV 641 S+TG + K + ++R+P+ ++ L++ G +NLK V + +P G T +TGV Sbjct: 1466 SVTGAALHHKPRHPYRGKRRRIPSQKDESAWLRVEGCCLHNLKGVNVAIPKGRLTVLTGV 1525 Query: 642 SGSGKSTLINDTLFPIAQRQLNGATIA--EPAPYRDIQGLEHFDKVIDIDQSPIGRTPRS 699 SG+GK++L+ T+ +A RQ G + + ++ G + V +DQ+PIG+TPRS Sbjct: 1526 SGAGKTSLMTGTIR-LAARQAIGDKLTREQRKLWKTSSGFDSIRMVYGVDQNPIGKTPRS 1584 Query: 700 NPATYTGVFTPVRELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDI 759 PATY G +R LFA ++R G+ GRFSFN G CE+C+G G+ K+EM FLP Sbjct: 1585 TPATYVGFLDDIRTLFAQTADARRLGFDRGRFSFNTGQGNCESCKGTGMQKLEMDFLPPC 1644 Query: 760 YVPCDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLT 819 YVPC+ C+GKRYN TL ++YKGKTI +VL M EA EFF++ P ++ L+ L + GL Sbjct: 1645 YVPCETCRGKRYNAATLTVRYKGKTIADVLQMDFAEAAEFFESQPRISDPLKLLSETGLG 1704 Query: 820 YIRLGQSATTLSGGEAQRVKLARELSK------------RGTGQTLYILDEPTTGLHFAD 867 Y+ LGQ++ TLSGGEAQR+KL EL K R LY+++EP+ GLH D Sbjct: 1705 YLTLGQASNTLSGGEAQRLKLVTELIKGRRVSRNALMKGRELPGDLYLIEEPSIGLHPRD 1764 Query: 868 IQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAEC 927 ++ L+DVLH+L DQGNT+VVIEHN +++ AD+++D+GP G GG I+ GTPE +A Sbjct: 1765 VRLLIDVLHRLADQGNTVVVIEHNTEIMAEADYVIDMGPGPGDAGGTIVAEGTPEQIA-G 1823 Query: 928 EASHTARFLK 937 + S TA +++ Sbjct: 1824 KKSPTAEYIR 1833 Score = 221 bits (562), Expect = 1e-55, Method: Compositional matrix adjust. Identities = 117/283 (41%), Positives = 172/283 (60%), Gaps = 4/283 (1%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 63 + +RGAR HNLKN++L +PR ++ V+TGLSGSGKSSLAFD +AEGQRR+++ +S YARQ Sbjct: 969 MALRGARHHNLKNVDLDVPRGEMTVLTGLSGSGKSSLAFDIFFAEGQRRFMDVMSPYARQ 1028 Query: 64 FLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCPDH 123 F +E PD+D + GL P ++IEQ + +STVGT+TEI ++RLL+A++G+ CP Sbjct: 1029 FTEQLESPDIDRLTGLPPTVAIEQNMSRGGTKSTVGTVTEIWQFMRLLYAKLGQAYCPQC 1088 Query: 124 DVPLAAQTVSQMVDNVLSQ-PEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARIDGE 182 VP+ ++ S++V+ V + + L LLAP+++ RKG + +GY +DG+ Sbjct: 1089 GVPVGKRSESEVVELVARELKKHGGLALLAPLVRGRKGHYADLARWAEGKGYEEMWVDGK 1148 Query: 183 VCDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVADMDDPKA 242 + LS L+ H +++VV R + ++LA + ALE+ G V + Sbjct: 1149 LVPLSGFQPLDRYSSHDLDLVVARPEASWP-PEKLAGAVHAALEMGEGFLQVLPPGSVRP 1207 Query: 243 EELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGV 285 E L AC CG S ELEP FSFN+P G CP C G G+ Sbjct: 1208 E--LMGTRLACASCGQSFPELEPYTFSFNSPRGWCPVCRGHGI 1248 Score = 150 bits (378), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 121/332 (36%), Positives = 171/332 (51%), Gaps = 30/332 (9%) Query: 406 CASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGD 465 C C G+R E VY + + + M++ A+E F+ K A + ++IA K Sbjct: 756 CPLCHGSRYGSEVLSVYRDGRNIADVLGMTVAAALECFSAEKGA-KASRIASK------- 807 Query: 466 RLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLAS----QIGAGL-VGVMYVLDEPSIGLH 520 L L VGL +LTL + TLSGGE QR++LA QIG+G M +LDEP GLH Sbjct: 808 -LGVLQRVGLGHLTLGQPLNTLSGGENQRLKLAKILLDQIGSGANSSKMLILDEPGTGLH 866 Query: 521 QRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAI 580 D E LL L + G+T++V+EH+ + I++AD+VID+GP G GG VVA G E I Sbjct: 867 FADIEVLLAVFRELVEQGHTLLVIEHNPEFIKSADYVIDLGPEGGAGGGHVVATGTPEEI 926 Query: 581 MAVPESLTGQYM----SGKRKIEVPK-KRVPAN-----PEKVLKLTGARGNNLKDVTLTL 630 +A + TG+Y+ G + P VP + PE V+ L GAR +NLK+V L + Sbjct: 927 VAAGKGYTGKYLREVLEGNPSVYDPADAAVPESADMDIPEGVMALRGARHHNLKNVDLDV 986 Query: 631 PVGLFTCITGVSGSGKSTLINDTLFPIAQRQL------NGATIAEPAPYRDIQGLEHFDK 684 P G T +TG+SGSGKS+L D F QR+ E DI L Sbjct: 987 PRGEMTVLTGLSGSGKSSLAFDIFFAEGQRRFMDVMSPYARQFTEQLESPDIDRLTGLPP 1046 Query: 685 VIDIDQSPIGRTPRSNPATYTGVFTPVRELFA 716 + I+Q+ +S T T ++ +R L+A Sbjct: 1047 TVAIEQNMSRGGTKSTVGTVTEIWQFMRLLYA 1078 Score = 128 bits (321), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 84/246 (34%), Positives = 121/246 (49%), Gaps = 38/246 (15%) Query: 728 PGRFSFNVRGGRCEACQGDGVI--------------KVEMHFLPDI---------YVPCD 764 P FSFN G C C+G G++ + E+ + ++ C Sbjct: 1228 PYTFSFNSPRGWCPVCRGHGIVGRGKVKEDQAQSLLEAELKYDRELARQADDDKGITTCP 1287 Query: 765 QCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFF--------------DAVPALARKL 810 C+G R N ++ +G T ++ + A E D V + ++L Sbjct: 1288 ACRGVRLNEFARAVRLQGVTPGDIASLPAVAAAELVKGWQFEREEALIARDVVAEITQRL 1347 Query: 811 QTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQ 870 L VGL Y+ L +SATTLSGGE QR++LA +L G LY+LDEPT GLH D + Sbjct: 1348 NFLQRVGLGYLSLDRSATTLSGGETQRIRLASQLGSHLRG-VLYVLDEPTIGLHPRDNEL 1406 Query: 871 LLDVLHKLRDQGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEAS 930 LL L +L+ +GNT++V+EH+ D ++ AD IVD+GP G GG I+ GT E +A S Sbjct: 1407 LLGTLDELKRRGNTLLVVEHDEDTMRRADHIVDMGPGAGIHGGRIMAQGTFEELAAMPDS 1466 Query: 931 HTARFL 936 T L Sbjct: 1467 VTGAAL 1472 Score = 125 bits (314), Expect = 8e-27, Method: Compositional matrix adjust. Identities = 77/201 (38%), Positives = 106/201 (52%), Gaps = 28/201 (13%) Query: 405 PCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIG 464 PC +C G R V + + + M A EFF + I Sbjct: 1647 PCETCRGKRYNAATLTVRYKGKTIADVLQMDFAEAAEFFES--------------QPRIS 1692 Query: 465 DRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQI-------------GAGLVGVMYV 511 D LK L GL YLTL +++ TLSGGEAQR++L +++ G L G +Y+ Sbjct: 1693 DPLKLLSETGLGYLTLGQASNTLSGGEAQRLKLVTELIKGRRVSRNALMKGRELPGDLYL 1752 Query: 512 LDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEV 571 ++EPSIGLH RD L+ L L D GNTV+V+EH+ + + AD+VID+GPG G GG + Sbjct: 1753 IEEPSIGLHPRDVRLLIDVLHRLADQGNTVVVIEHNTEIMAEADYVIDMGPGPGDAGGTI 1812 Query: 572 VAEGPLEAIMAVPESLTGQYM 592 VAEG E I A +S T +Y+ Sbjct: 1813 VAEGTPEQI-AGKKSPTAEYI 1832 Score = 59.3 bits (142), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 35/116 (30%), Positives = 56/116 (48%), Gaps = 5/116 (4%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 63 + V G HNLK +N+ IP+ +L V+TG+SG+GK+SL T+ ++ + L+ R+ Sbjct: 1497 LRVEGCCLHNLKGVNVAIPKGRLTVLTGVSGAGKTSLMTGTIRLAARQAIGDKLTREQRK 1556 Query: 64 FLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPR 119 D + ++Q PRST T D +R LFA+ + R Sbjct: 1557 LWKTSSGFD-----SIRMVYGVDQNPIGKTPRSTPATYVGFLDDIRTLFAQTADAR 1607 >UniRef50_Q6MBT0 Putative excinuclease ABC chain A n=1 Tax=Candidatus Protochlamydia amoebophila UWE25 RepID=Q6MBT0_PARUW Length = 937 Score = 664 bits (1712), Expect = 0.0, Method: Compositional matrix adjust. Identities = 362/925 (39%), Positives = 564/925 (60%), Gaps = 20/925 (2%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 63 I ++G + HNLKN+++ +P+ + V+TG+SGSGKSSLAFDTL+AEGQRRY+E LS AR Sbjct: 10 INLQGCKEHNLKNLSVQLPKHAITVITGVSGSGKSSLAFDTLFAEGQRRYLEYLSPQARP 69 Query: 64 FLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCPDH 123 ++ M KPDVD IEGLSP ++I Q TV T T+++D+L LL+A+VG+ P Sbjct: 70 WIKQMPKPDVDLIEGLSPTLAIGQHRQPLYFYGTVATYTDLYDFLSLLYAKVGDQYSPAT 129 Query: 124 DVPLAAQTVSQMVDNVLSQ-PEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARIDGE 182 L+ T +M+D +L G RL L+API ++ H + + L G+IR RI+ + Sbjct: 130 GKKLSRFTRQEMIDWILKNYSAGSRLQLIAPIKLVKENGH-QAITRLQQMGFIRMRINEQ 188 Query: 183 VCDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVADMDDPKA 242 +P + + +EVVVDR ++R+ + RLA S ETAL+LS G + + + Sbjct: 189 EWCGENPFPIN-KAISNLEVVVDRLEIREGIRDRLAPSVETALDLSQGILKIQEGKEGNT 247 Query: 243 EELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVI---QNPE 299 L + + CP G+S LE F+FN+P GAC C+GLG ++ +P +VI P Sbjct: 248 HYL--TEIYVCPETGFSFAPLEAGDFNFNSPKGACAACNGLGGREQVNPSQVIFDENEPL 305 Query: 300 LSLAGGAIRGWDRRNFYYFQ-MLKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKENIEF 358 L + ++ Y F+ +LK+L E +S + +L+G +E + Sbjct: 306 LDQIQVILDHLPKKAAYSFKSLLKALWKILNLSEENFIKDISQMILNKILFGHSQEIVFN 365 Query: 359 KYMNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGTRLRREA 418 +N+ + + ++G++ + + ++ EL+ FI + C+SC G RL+ E+ Sbjct: 366 VQINEESEQ--LKAKWKGLIPVLNEALEMKKNKGSLSELS-FIDWQTCSSCLGGRLKPES 422 Query: 419 RHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNVGLNYL 478 ++ + + +++ + G++ I ++IL I RL+FL VGL YL Sbjct: 423 LACLIQEKNIYQLCSLTVAECLIKIKAWLFTGKQEAIVKEILPHIQSRLEFLDQVGLGYL 482 Query: 479 TLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLG 538 TL+R +TLS GEA RI+LASQIGA L G++Y+LDEPS+GLH++D + L + L+ LG Sbjct: 483 TLTREGKTLSDGEAHRIQLASQIGAKLSGIIYILDEPSLGLHRQDIQHLHKVIHELKALG 542 Query: 539 NTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKI 598 NTV++VEH++ I+ AD+++++GPGAG GG++ +G + ++ SLTG+++SGK + Sbjct: 543 NTVVIVEHEKSLIQQADYILELGPGAGSLGGQICFQGTITDLLNDSNSLTGKWLSGKLSL 602 Query: 599 EVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIA 658 +P +R + L++ GA NNL D + +P+G F GVSGSGKSTL+ D I Sbjct: 603 PIPPRR--KIQQDWLEIRGATLNNLNDFSANIPLGCFVGFCGVSGSGKSTLVLD----II 656 Query: 659 QRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGV 718 +QL + P+ + + ++I ++ + RS PATY G+ TP+R+LFA Sbjct: 657 GQQLKNFLVRGIIPHF-LNKYQTIKRLISHEKQTDRLSARSIPATYIGIMTPLRQLFAET 715 Query: 719 PESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEI 778 ++ARGYT RFS N RGGRCEAC+G G I+V MH +PD ++PCD C+G RYN ETL+I Sbjct: 716 RLAKARGYTASRFSLNKRGGRCEACEGLGYIEVNMHLMPDFFMPCDICQGLRYNYETLQI 775 Query: 779 KYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRV 838 ++ K I ++L ++ E+ + F +P+LA L+ + ++GL Y++LGQ TLSGGE QR+ Sbjct: 776 TWENKNIADILRLSALESFQLFKHIPSLAPTLELMTELGLDYLQLGQPFNTLSGGEIQRL 835 Query: 839 KLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTA 898 KL +L+ + +TLYILDEP++GLH DI++L+ +LHKL ++G+T+ VIEH+LD++ A Sbjct: 836 KLIADLAGKTQEKTLYILDEPSSGLHLQDIEKLVKILHKLVEKGHTVFVIEHHLDILYQA 895 Query: 899 DWIVDLGPEGGSGGGEILVSGTPET 923 DW+++LGPEGG GG ++ G P T Sbjct: 896 DWLIELGPEGGPKGGRLIFEG-PST 919 Score = 120 bits (300), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 68/191 (35%), Positives = 105/191 (54%), Gaps = 15/191 (7%) Query: 760 YVPCDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDA--------------VPA 805 + C C G R E+L + K I+++ +T+ E A +P Sbjct: 407 WQTCSSCLGGRLKPESLACLIQEKNIYQLCSLTVAECLIKIKAWLFTGKQEAIVKEILPH 466 Query: 806 LARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHF 865 + +L+ L VGL Y+ L + TLS GEA R++LA ++ + +G +YILDEP+ GLH Sbjct: 467 IQSRLEFLDQVGLGYLTLTREGKTLSDGEAHRIQLASQIGAKLSG-IIYILDEPSLGLHR 525 Query: 866 ADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVA 925 DIQ L V+H+L+ GNT+V++EH +I+ AD+I++LGP GS GG+I GT + Sbjct: 526 QDIQHLHKVIHELKALGNTVVIVEHEKSLIQQADYILELGPGAGSLGGQICFQGTITDLL 585 Query: 926 ECEASHTARFL 936 S T ++L Sbjct: 586 NDSNSLTGKWL 596 Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 42/130 (32%), Positives = 62/130 (47%), Gaps = 8/130 (6%) Query: 611 KVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQL------NG 664 + + L G + +NLK++++ LP T ITGVSGSGKS+L DTLF QR+ Sbjct: 8 RFINLQGCKEHNLKNLSVQLPKHAITVITGVSGSGKSSLAFDTLFAEGQRRYLEYLSPQA 67 Query: 665 ATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPE--SR 722 + P D+ +E + I Q ATYT ++ + L+A V + S Sbjct: 68 RPWIKQMPKPDVDLIEGLSPTLAIGQHRQPLYFYGTVATYTDLYDFLSLLYAKVGDQYSP 127 Query: 723 ARGYTPGRFS 732 A G RF+ Sbjct: 128 ATGKKLSRFT 137 >UniRef50_C7I293 Excinuclease ABC, A subunit n=1 Tax=Thiomonas intermedia K12 RepID=C7I293_THIIN Length = 1979 Score = 661 bits (1705), Expect = 0.0, Method: Compositional matrix adjust. Identities = 398/1001 (39%), Positives = 559/1001 (55%), Gaps = 97/1001 (9%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 63 I + GAR +NLKN++L IP +++VVTG+SGSGKSSL FDT+YAEGQRRYVE+ S YARQ Sbjct: 19 IRIIGARQNNLKNLDLDIPLGRIVVVTGVSGSGKSSLVFDTVYAEGQRRYVETFSPYARQ 78 Query: 64 FLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCPDH 123 FL M++P VD IEG+ PAI+I+Q + RSTVGT+TE+ D+L+LLFAR C Sbjct: 79 FLDRMDRPQVDRIEGIPPAIAIDQTNPVRTSRSTVGTMTELADHLKLLFARAARLYCRGC 138 Query: 124 DVPLAAQTVSQMVDNVLSQ----PEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARI 179 + T +V++V + P+G R ++ + + + LA+QGY R I Sbjct: 139 GAEVRRDTAQSIVEDVQRRARLLPQGLRAAVVFAVAMPQGMSVEHITQQLAAQGYTR--I 196 Query: 180 DGEVCDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVV----- 234 GE D PK ++VV DR ++ D RL+E+ E AL L G V Sbjct: 197 LGE----RDTPK-----GRVLDVVQDRLRLPTDEPARLSEAVEAALRLGQGRMEVHELPR 247 Query: 235 -ADMDDPKAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDR 293 A+ + K +S++ C C R+ P LFSFN+P GAC TC G G D D Sbjct: 248 DAEAAESKGMVWRYSSDLHCADCDIHYRDPSPGLFSFNSPVGACETCRGFGRVIGVDLDL 307 Query: 294 VIQNPELSLAGGAIRGWDRRNFYYFQM-LKSLADHYKFDVEAPWGSLSANVHKVVLYGSG 352 VI + +L GA++ W ++F Q L+ A + ++ PW LS + V+ G Sbjct: 308 VIPDVRKTLRAGAVKPWQTQSFAECQTDLERYAAQAEIRLDVPWAELSESERTWVIEGD- 366 Query: 353 KENIEFKYMNDRGDTSIRRHPFEGVLHNMERRYKETESSA----VREELAKFISNRPCAS 408 + RG+ ++ + + R + ES A VR L+K+ S C + Sbjct: 367 --------PDWRGN-------WQKQFYGVRRYFDWLESRAYKMHVRVLLSKYRSYTACPT 411 Query: 409 CEGTRLRREA---------------RHVYVENTPLPA-----------------ISDMSI 436 C+G RL+ EA + Y P+ A ++ + I Sbjct: 412 CQGARLKTEALLWRIGSKFQADTALQGGYRRFRPVGAQWSDAVLGGLPGLNLHDVNSLPI 471 Query: 437 GHAMEFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIR 496 F +L L + +L I RL++L +VGL YLTL R + TLSGGE QRI Sbjct: 472 ERLQRLFADLALPDMAQAASSMLLDNIRSRLRYLRDVGLGYLTLDRQSRTLSGGEVQRIN 531 Query: 497 LASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADH 556 L + +G L ++VLDEPSIGLH RD +RL G L L++ GN++++VEHD +R AD Sbjct: 532 LTTALGTALTQTLFVLDEPSIGLHPRDLDRLGGVLHRLKEAGNSLLLVEHDPQLMRTADW 591 Query: 557 VIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIE--VPKKRVPANPEK--- 611 +++IGPG G GG +V +G L+ +LTG+Y+SG+ ++ +P++R P + Sbjct: 592 MLEIGPGPGERGGHLVFQGTLDQAQR-SNTLTGRYLSGELQVSDALPRRRTPRRDAQGGL 650 Query: 612 ---VLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIA 668 L L GAR +NLK +T+ +P+G T +TGVSG GKSTL+ D L+P R L G T Sbjct: 651 LAPRLILEGAREHNLKSLTVEIPLGFMTALTGVSGCGKSTLVGDVLYPALARAL-GKTAP 709 Query: 669 EPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESRARGYTP 728 P + + G + V+ +DQSPIG+T RSNP ++ G F +R LFA +P +R RGYT Sbjct: 710 VPGAFDRLLGADQVGDVVLVDQSPIGKTARSNPVSFVGAFDGIRALFAALPAARERGYTA 769 Query: 729 GRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKYKGKT---- 784 G FSFN GRC C G G VEM FL D+Y+ C C GKRY E LE++ + Sbjct: 770 GTFSFNSGEGRCPTCGGSGFEHVEMQFLSDVYLRCPDCDGKRYRAEVLEVQLPAQAGFAP 829 Query: 785 --IHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLAR 842 + +VLD+T+ EA + F + R LQ L+DVGL Y+RLGQ TLSGGEAQR+KLA Sbjct: 830 LNMAQVLDLTVAEALQRFRGQADITRTLQALVDVGLDYLRLGQPTPTLSGGEAQRLKLAG 889 Query: 843 ELSKRGTGQ-------TLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVI 895 L+ + TL++ DEPTTGLHF D+ +LL L KL D G+T++VIEHNLDVI Sbjct: 890 FLADAAKTRAGLARKGTLFLFDEPTTGLHFDDVAKLLRALRKLLDAGHTVLVIEHNLDVI 949 Query: 896 KTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFL 936 ++DW++DLGPEGG GG ++ +G P+ +A C S T + L Sbjct: 950 ASSDWVIDLGPEGGDAGGRLVFAGPPDELAACATSFTGQAL 990 Score = 621 bits (1601), Expect = e-176, Method: Compositional matrix adjust. Identities = 383/936 (40%), Positives = 538/936 (57%), Gaps = 65/936 (6%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 63 I +R AR HNL+ +++ IPR ++ V+TG+SGSGKS+LAFD L+ EGQRRY+ES++AYARQ Sbjct: 1089 IAIRQAREHNLRGVDVDIPRGEMTVITGVSGSGKSTLAFDVLFTEGQRRYLESINAYARQ 1148 Query: 64 FLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCPDH 123 F+ +PDV+ I G+ P ++IEQ+++ +STVGT+TE + +LRL++A+ G CPD Sbjct: 1149 FVQPAARPDVEAIVGIPPTVAIEQRTSRGGRKSTVGTLTEAYHFLRLIYAKCGTQYCPDC 1208 Query: 124 DVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARIDGEV 183 ++P+ Q+ + +L G+ + LLAP++ +RKG +T S GY R+DG Sbjct: 1209 NIPIEPQSPEAIAAQLLRDWRGQHIGLLAPLVVQRKGYYTDLAVWARSMGYTHLRVDGAF 1268 Query: 184 CDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVV-ADMDDPKA 242 P+L+ K+H+IE+ V VR D + L + AL L G +V A +D K Sbjct: 1269 VPTDPWPRLDRFKEHSIELPVGDVVVRADNEEALRDLLRRALALGKGVVLVLAPLDGLK- 1327 Query: 243 EELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPELSL 302 E + + P MR L L S ACP C G ++ DP + N Sbjct: 1328 -EAMEAGQPEPP-----MRSL---LLSTKR---ACPGC-GRSFRE-LDPRQFSYN----- 1368 Query: 303 AGGAIRGWDRRNFYYFQMLKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKENIEFKYMN 362 + GW F +++ D + EA W + A+ K G + + + Sbjct: 1369 ---SPTGWCPTCFGTGELIAGF-DAEQTGEEAAW--VEADGEKATPRGKPGRDRKAAPVA 1422 Query: 363 DRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGTRLRREARHVY 422 + G S C SC G RL R++ V Sbjct: 1423 EPGAPST------------------------------------CPSCHGARLNRDSLAVR 1446 Query: 423 VENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTLSR 482 + + + ++ I A +F L L + A+I L EI RL F+ VGL YL L R Sbjct: 1447 LRDQSIAQLAARDIDAAAAWFGALALTPREAEIVRDALSEIRSRLAFMQQVGLGYLGLDR 1506 Query: 483 SAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVI 542 A TLSGGEAQRIRLA+Q+G+ L GV YVLDEP+IGLH RDN LL L L+ GNT++ Sbjct: 1507 GAPTLSGGEAQRIRLAAQLGSNLRGVCYVLDEPTIGLHPRDNRILLDALALLKAKGNTLV 1566 Query: 543 VVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEVPK 602 VVEHDED +R ADH+IDIGPGAG GG+VVA G L +MA ++ T + + + Sbjct: 1567 VVEHDEDTMRRADHLIDIGPGAGRRGGQVVASGALAEVMAHADTATARSLRDPMPWPLQP 1626 Query: 603 KRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQL 662 + + + L L A +NL+ ++ P G T +TGVSGSGKSTL + L P ++L Sbjct: 1627 RPLTRADQPALHLHSAHLHNLQGLSAQFPRGRLTVVTGVSGSGKSTLAREVLVPALHQRL 1686 Query: 663 NGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESR 722 G E D+ G E ++V+++DQ+PIG+TPRS ATY G++ +R+LFA E+R Sbjct: 1687 AGHA-GEIDGAGDLTGWEGLERVLEVDQAPIGKTPRSCAATYLGLWDGIRQLFADTEEAR 1745 Query: 723 ARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKYKG 782 RGYT RFSFN GRC C+G G +KV M+FLPD+ VPC C G R+N ETL ++ +G Sbjct: 1746 IRGYTASRFSFNTGPGRCPTCEGQGAVKVAMNFLPDVTVPCTDCNGLRFNPETLAVRLRG 1805 Query: 783 KTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLAR 842 + EVL M ++EA EFF A + LQ L DVGL Y++LGQ + LSGGEAQR+KL Sbjct: 1806 RNAGEVLQMEVDEAVEFFAAHRKIHHALQLLQDVGLGYLQLGQPSPFLSGGEAQRIKLVT 1865 Query: 843 ELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADWIV 902 EL+ GT T+Y+LDEPT GLH D ++L+ VLH+L D G+T+VVIEH+LD++ ADW++ Sbjct: 1866 ELATAGTRPTVYVLDEPTVGLHKTDTEKLIRVLHRLTDSGHTVVVIEHDLDMMANADWLI 1925 Query: 903 DLGPEGGSGGGEILVSGTPETVAECEA-SHTARFLK 937 DLGPEGG GGG +++ G E +A HTA+ L+ Sbjct: 1926 DLGPEGGKGGGRLVMQGPTADFLEADAPGHTAKALR 1961 Score = 106 bits (265), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 76/202 (37%), Positives = 110/202 (54%), Gaps = 28/202 (13%) Query: 406 CASCEGTRLRREARHVYVEN----TPL--PAISDMSIGHAMEFFNNLKLAGQRAKIAEKI 459 C C+G R R E V + PL + D+++ A++ F GQ Sbjct: 804 CPDCDGKRYRAEVLEVQLPAQAGFAPLNMAQVLDLTVAEALQRFR-----GQ-------- 850 Query: 460 LKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLA------SQIGAGLV--GVMYV 511 +I L+ LV+VGL+YL L + TLSGGEAQR++LA ++ AGL G +++ Sbjct: 851 -ADITRTLQALVDVGLDYLRLGQPTPTLSGGEAQRLKLAGFLADAAKTRAGLARKGTLFL 909 Query: 512 LDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEV 571 DEP+ GLH D +LL L L D G+TV+V+EH+ D I ++D VID+GP G GG + Sbjct: 910 FDEPTTGLHFDDVAKLLRALRKLLDAGHTVLVIEHNLDVIASSDWVIDLGPEGGDAGGRL 969 Query: 572 VAEGPLEAIMAVPESLTGQYMS 593 V GP + + A S TGQ ++ Sbjct: 970 VFAGPPDELAACATSFTGQALA 991 Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust. Identities = 37/136 (27%), Positives = 57/136 (41%), Gaps = 24/136 (17%) Query: 3 KIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYAR 62 ++ + GAR HNLK++ + IP + +TG+SG GKS+L D LY R + + Sbjct: 654 RLILEGAREHNLKSLTVEIPLGFMTALTGVSGCGKSTLVGDVLY-PALARALGKTAPVPG 712 Query: 63 QFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARV------- 115 F L+ V + + ++Q RS + D +R LFA + Sbjct: 713 AFDRLLGADQVGDV------VLVDQSPIGKTARSNPVSFVGAFDGIRALFAALPAARERG 766 Query: 116 ----------GEPRCP 121 GE RCP Sbjct: 767 YTAGTFSFNSGEGRCP 782 >UniRef50_A4BKX6 Excinuclease ABC, A subunit n=4 Tax=Proteobacteria RepID=A4BKX6_9GAMM Length = 1868 Score = 655 bits (1689), Expect = 0.0, Method: Compositional matrix adjust. Identities = 397/987 (40%), Positives = 545/987 (55%), Gaps = 84/987 (8%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 63 I +RGAR +NL+N++L IP +L+V+TG+SGSGKSSLAFDT+YAEGQRRYVE+ S YARQ Sbjct: 10 ISIRGARQNNLRNLDLDIPLGELVVITGVSGSGKSSLAFDTVYAEGQRRYVETFSPYARQ 69 Query: 64 FLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCPDH 123 FL M+KP + I+G+ PAI+I+Q + + RSTVGT+TE++D+L+LLFAR C Sbjct: 70 FLDRMDKPAAERIDGIPPAIAIDQTNPVRSSRSTVGTMTELNDHLKLLFARAARLYCQRC 129 Query: 124 DVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARIDGEV 183 + T + + ++++ EG+R ++ + + L QGY R Sbjct: 130 GHRVVRDTADGIFEQLIARGEGQRAIITFAVEVPANFTPEEIRALLGRQGYTR------- 182 Query: 184 CDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVADMDDPKAE 243 L IEV DR ++ + R+ E+ E AL+ G V +D+ + Sbjct: 183 --------LHSTDNQRIEVSQDRLRLAANHRNRIVEALEAALKHGLGRTSVYPLDEHRQP 234 Query: 244 E--LLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPELS 301 + FS + C C + P FSFN+P GAC C G G D VI + LS Sbjct: 235 QAPWRFSTDLHCADCDLHYTDPHPSFFSFNSPIGACTVCRGFGRTLGIDYAAVIPDERLS 294 Query: 302 LAGGAIRGWDRRNFYYFQM-LKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKENIEFKY 360 LA GAIR W Q L A H + PW +L+ + + VL G Sbjct: 295 LAAGAIRPWRSGQSAECQRDLLRFARHRDLPTDTPWCNLTESDRRWVLDGE--------- 345 Query: 361 MNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGTRLRRE--- 417 GD + R + G +E + + VR L+K+ S C++C G RL+ + Sbjct: 346 ----GDGADRWYGVRGYFDWLESKSYKMH---VRVLLSKYRSYDLCSACHGARLKPQTLL 398 Query: 418 ---------------ARHVYVENTPLP----------AISD---MSIGHAMEFFNNLKLA 449 A Y LP +I D + + A+ FF L+L Sbjct: 399 WRLGRRKDADAVLDPAARFYPAGAALPRERLTKLPGLSIHDLMRLPLERAVHFFQLLQLP 458 Query: 450 GQRAKIAEKILKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVM 509 + AE +L+ I RL++L VGL YLTL R + TLSGGE QRI L + +G LV + Sbjct: 459 APMDEAAEVLLEGIRTRLRYLGEVGLGYLTLDRQSRTLSGGEVQRINLTTALGTSLVNTL 518 Query: 510 YVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGG 569 +VLDEPSIGLH RD +R++ + LRD GNT++VVEHD +RAAD ++D+GPG G GG Sbjct: 519 FVLDEPSIGLHPRDMQRIIEVMQRLRDAGNTLLVVEHDPQVMRAADRILDLGPGPGERGG 578 Query: 570 EVVAEGPLEAIMAVPESLTGQYMSGKRKI---EVPKKRVPANPEKVLKLTGARGNNLKDV 626 ++V GP ++ SLT Y+SG+R I E+ + R +P L++ GA +NLK++ Sbjct: 579 DIVFCGPPAELLQARGSLTADYLSGRRTIGSAEIERPR--GSPSLWLEIDGAAAHNLKNL 636 Query: 627 TLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAEPAPYRDIQGLEHFDKVI 686 + LP+ +TGVSGSGKSTL+ L+ A R+L G P + + G E D+V+ Sbjct: 637 DVRLPLQRLAVLTGVSGSGKSTLLQSVLYN-ALRKLQGRPAERPGQFTALHGHEQLDEVV 695 Query: 687 DIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESRARGYTPGRFSFNVRGGRCEACQGD 746 +DQSPIG+T RSNPA+Y G FT +R+ FA P +R RGY PG FSFN GRC +C G+ Sbjct: 696 LVDQSPIGKTTRSNPASYVGAFTAIRKAFAAEPLARERGYQPGTFSFNSGSGRCPSCGGN 755 Query: 747 GVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKYK--------GKTIHEVLDMTIEEARE 798 G VEM FL D+Y+ C C G+RY E LE+K K++ +VL MT+ +A Sbjct: 756 GFEHVEMQFLSDVYLRCPDCDGRRYRAEVLEVKLAPSADCRTTPKSVADVLAMTVTQASA 815 Query: 799 FFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQT-----L 853 FF P + L L VGL Y++LGQ TLSGGEAQR+KLA L+ Q L Sbjct: 816 FFADYPDIVAALTPLEAVGLGYLQLGQPVPTLSGGEAQRLKLAGHLTGAARRQAQHKRLL 875 Query: 854 YILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGG 913 ++ DEPTTGLHF DI LL +L G++++VIEHNLDVI ADWI+DLGPEGG GG Sbjct: 876 FLFDEPTTGLHFEDIATLLHAFERLLQAGHSLLVIEHNLDVIAAADWIIDLGPEGGERGG 935 Query: 914 EILVSGTPETVAECEASHTARFLKPML 940 EI+ SG+P V ASHT + L L Sbjct: 936 EIVCSGSPAQVMAVAASHTGQALAAYL 962 Score = 476 bits (1226), Expect = e-132, Method: Compositional matrix adjust. Identities = 272/548 (49%), Positives = 365/548 (66%), Gaps = 12/548 (2%) Query: 405 PCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIG 464 PC +C+G RL EA + + + + +S+ A F++L+L G+ A IA +L E+ Sbjct: 1298 PCPACQGRRLCPEALAIRFQGRNIADYTALSVEAAAHIFDSLELTGREAAIARDLLPELC 1357 Query: 465 DRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDN 524 RL FL VGL+YLTL R+A TLSGGEAQRIRLA+Q+G+ L G YVLDEP+IGLH RDN Sbjct: 1358 HRLAFLKEVGLSYLTLDRAAPTLSGGEAQRIRLAAQLGSSLHGACYVLDEPTIGLHPRDN 1417 Query: 525 ERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVP 584 LL +L LR GNT++VVEHDE+ IR A+HVID+GP AG GG VVA G + Sbjct: 1418 RMLLDSLRRLRAKGNTIVVVEHDEETIRCAEHVIDLGPAAGAAGGHVVATGTPLQLAQSA 1477 Query: 585 ESLTGQYMSGK-RKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSG 643 +SLTG+ ++ R + ++R P P++V++L GA +NL + ++LP+G ++GVSG Sbjct: 1478 DSLTGRLLAEPLRHPLLARRRRPQTPDRVIRLVGANRHNLHGIDVSLPLGRLVGVSGVSG 1537 Query: 644 SGKSTLINDTLFPIAQRQLNGATIAEPAPYRDIQ---GLEHFDKVIDIDQSPIGRTPRSN 700 SGKSTL+ L+ +R + AP RD + G E D+V+++DQSPIG+TPRS Sbjct: 1538 SGKSTLVRTVLYANLRRLVAAKRSRSRAPLRDCKDLIGWESIDRVLEVDQSPIGKTPRSC 1597 Query: 701 PATYTGVFTPVRELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIY 760 PATY G + VR LFA E+R RGY PGRFSFN + GRC AC+G G+ +V M FLPD+ Sbjct: 1598 PATYVGFWDDVRRLFAQTEEARVRGYGPGRFSFNTKDGRCPACEGQGLQRVAMSFLPDVT 1657 Query: 761 VPCDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTY 820 + CD C G R+ ETL ++Y+G++I VL +++ EA EFF + L+ L D GL Y Sbjct: 1658 LRCDLCNGLRFTPETLAVEYRGQSIGAVLQLSVAEAAEFFGVHRKIQHALRLLQDTGLGY 1717 Query: 821 IRLGQSATTLSGGEAQRVKLARELSKRGTGQ-------TLYILDEPTTGLHFADIQQLLD 873 + LGQ + TLSGGEAQR+KL EL+K G+ TLY+LDEPT GLH AD+++L+ Sbjct: 1718 LALGQPSPTLSGGEAQRLKLVTELAKARPGERRGRSPHTLYLLDEPTVGLHMADVEKLIR 1777 Query: 874 VLHKLRDQGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAEC-EASHT 932 VLH+L GNT+VVIEHNLD++ DW++DLGPEGG GGG I+ G PETVA+ E S+T Sbjct: 1778 VLHRLVAAGNTVVVIEHNLDMLAEVDWLIDLGPEGGQGGGRIVAEGAPETVAQVSEGSYT 1837 Query: 933 ARFLKPML 940 AR L L Sbjct: 1838 ARLLDEFL 1845 Score = 245 bits (626), Expect = 5e-63, Method: Compositional matrix adjust. Identities = 125/284 (44%), Positives = 183/284 (64%), Gaps = 3/284 (1%) Query: 2 DKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYA 61 + I + AR HNLKNI++ +PRD+L V+TG+SGSGKS+LAFD LY EGQRRY+ESL+AYA Sbjct: 991 ESIYIHHAREHNLKNIDVHVPRDRLTVITGISGSGKSTLAFDILYNEGQRRYLESLNAYA 1050 Query: 62 RQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCP 121 RQF+ +P+VD I G+ P ++IEQ+++ +STV T TE++ +LRLLF ++G CP Sbjct: 1051 RQFVQPAARPEVDAIFGIPPTVAIEQRTSRGGRKSTVATQTELYHFLRLLFVKLGVQHCP 1110 Query: 122 DHDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARIDG 181 D D+P+ AQTV +V +L G+ +LAP++ RKG +T+ + A +G+ + R+D Sbjct: 1111 DCDLPIEAQTVDAIVARLLRAHRGRPAHVLAPLVTARKGYYTELAKWAAGKGFTQLRVDR 1170 Query: 182 EVCDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVADMDDPK 241 + ++ P+L+ ++H I++ V + + RL + ALEL G V D K Sbjct: 1171 VLLPTANWPRLDRYREHDIDLPVAELMLEPENEARLRAQLQWALELGKGRVKV---DFGK 1227 Query: 242 AEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGV 285 E LFS ACP CG S +E +PR SFN+ G CP+C G+GV Sbjct: 1228 PGEALFSIQRACPNCGRSFQEADPRRLSFNSKHGWCPSCYGVGV 1271 Score = 146 bits (368), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 92/239 (38%), Positives = 135/239 (56%), Gaps = 34/239 (14%) Query: 728 PGRFSFNVRGGRCEACQGDGVIKV---------EMHFL-------PDIYVPCDQCKGKRY 771 P R SFN + G C +C G GV+ E+ +L P PC C+G+R Sbjct: 1251 PRRLSFNSKHGWCPSCYGVGVVLAGFDALQTGEEVEWLVAESDAEPH---PCPACQGRRL 1307 Query: 772 NRETLEIKYKGKTIHEVLDMTIEEAREFFDA--------------VPALARKLQTLMDVG 817 E L I+++G+ I + +++E A FD+ +P L +L L +VG Sbjct: 1308 CPEALAIRFQGRNIADYTALSVEAAAHIFDSLELTGREAAIARDLLPELCHRLAFLKEVG 1367 Query: 818 LTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHK 877 L+Y+ L ++A TLSGGEAQR++LA +L G Y+LDEPT GLH D + LLD L + Sbjct: 1368 LSYLTLDRAAPTLSGGEAQRIRLAAQLGSSLHG-ACYVLDEPTIGLHPRDNRMLLDSLRR 1426 Query: 878 LRDQGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFL 936 LR +GNTIVV+EH+ + I+ A+ ++DLGP G+ GG ++ +GTP +A+ S T R L Sbjct: 1427 LRAKGNTIVVVEHDEETIRCAEHVIDLGPAAGAAGGHVVATGTPLQLAQSADSLTGRLL 1485 Score = 121 bits (304), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 111/345 (32%), Positives = 163/345 (47%), Gaps = 50/345 (14%) Query: 406 CASCEGTRLRREARHVYV------ENTPLPAISD---MSIGHAMEFFNNLKLAGQRAKIA 456 C C+G R R E V + TP +++D M++ A FF + Sbjct: 772 CPDCDGRRYRAEVLEVKLAPSADCRTTP-KSVADVLAMTVTQASAFFADYP--------- 821 Query: 457 EKILKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIG------AGLVGVMY 510 +I L L VGL YL L + TLSGGEAQR++LA + A +++ Sbjct: 822 -----DIVAALTPLEAVGLGYLQLGQPVPTLSGGEAQRLKLAGHLTGAARRQAQHKRLLF 876 Query: 511 VLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGE 570 + DEP+ GLH D LL L G++++V+EH+ D I AAD +ID+GP G GGE Sbjct: 877 LFDEPTTGLHFEDIATLLHAFERLLQAGHSLLVIEHNLDVIAAADWIIDLGPEGGERGGE 936 Query: 571 VVAEGPLEAIMAVPESLTGQYMSGKRKIEV------------PKKRVPA--NPEKVLKLT 616 +V G +MAV S TGQ ++ K P VPA + + + + Sbjct: 937 IVCSGSPAQVMAVAASHTGQALAAYLKARATKPLSSNSATAEPGAAVPAAQHGAESIYIH 996 Query: 617 GARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQ----LNGAT--IAEP 670 AR +NLK++ + +P T ITG+SGSGKSTL D L+ QR+ LN +P Sbjct: 997 HAREHNLKNIDVHVPRDRLTVITGISGSGKSTLAFDILYNEGQRRYLESLNAYARQFVQP 1056 Query: 671 APYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELF 715 A ++ + + I+Q +S AT T ++ +R LF Sbjct: 1057 AARPEVDAIFGIPPTVAIEQRTSRGGRKSTVATQTELYHFLRLLF 1101 Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 42/118 (35%), Positives = 63/118 (53%), Gaps = 16/118 (13%) Query: 610 EKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAE 669 ++ + + GAR NNL+++ L +P+G ITGVSGSGKS+L DT++ QR+ + Sbjct: 7 KRCISIRGARQNNLRNLDLDIPLGELVVITGVSGSGKSSLAFDTVYAEGQRRY----VET 62 Query: 670 PAPYRDIQGLEHFDK-----------VIDIDQSPIGRTPRSNPATYTGVFTPVRELFA 716 +PY Q L+ DK I IDQ+ R+ RS T T + ++ LFA Sbjct: 63 FSPYAR-QFLDRMDKPAAERIDGIPPAIAIDQTNPVRSSRSTVGTMTELNDHLKLLFA 119 Score = 44.7 bits (104), Expect = 0.020, Method: Compositional matrix adjust. Identities = 40/116 (34%), Positives = 60/116 (51%), Gaps = 3/116 (2%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 63 I + GA HNL I++ +P +L+ V+G+SGSGKS+L LYA RR V + + +R Sbjct: 1507 IRLVGANRHNLHGIDVSLPLGRLVGVSGVSGSGKSTLVRTVLYAN-LRRLVAAKRSRSRA 1565 Query: 64 FLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPR 119 L + D+ E + + ++Q PRS T D +R LFA+ E R Sbjct: 1566 --PLRDCKDLIGWESIDRVLEVDQSPIGKTPRSCPATYVGFWDDVRRLFAQTEEAR 1619 >UniRef50_B8GRH5 Excinuclease ABC, A subunit n=10 Tax=Bacteria RepID=B8GRH5_THISH Length = 1889 Score = 644 bits (1661), Expect = 0.0, Method: Compositional matrix adjust. Identities = 411/1011 (40%), Positives = 560/1011 (55%), Gaps = 110/1011 (10%) Query: 2 DKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYA 61 D+I + GAR +NLK ++L +P ++LIVVTG+SGSGKSSLAFDT+YAEGQRRYVE+ S YA Sbjct: 4 DRIRIFGARQNNLKGLDLELPLNELIVVTGVSGSGKSSLAFDTVYAEGQRRYVETFSPYA 63 Query: 62 RQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCP 121 RQFL M+KP VD IEG+ PAI+I+Q + RSTVGT+TE++D+L+LL+AR C Sbjct: 64 RQFLDRMDKPAVDRIEGVLPAIAIDQTNPVRTSRSTVGTMTELNDHLKLLYARAAHLHCR 123 Query: 122 DHDVPLAAQTVSQMVDNVLSQP--EGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARI 179 + T + + L + +G R+M++ P+ + +L +QGY R Sbjct: 124 GCGTRVRCDTPEAIANEWLERAHRDGTRVMVVFPVPVPENFSLEEVKGHLKAQGY--ERF 181 Query: 180 DGEVCDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVADM-- 237 GE +EV+ DR +V RL E+ ETAL G V + Sbjct: 182 HGET-------------DQRLEVIQDRLRVEPGNRGRLVEALETALHHGQGRVRVYPLGE 228 Query: 238 DDPKAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQN 297 D + +SA+ C C E P FSFN+P GAC C G G D D VI + Sbjct: 229 DREALAPVDYSADLHCAACDLHYSETTPNHFSFNSPIGACEACRGFGRTMGIDLDLVIPD 288 Query: 298 PELSLAGGAIRGWDRRNFYYFQM-LKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKENI 356 +SL GA++ W +Y Q LK+ A ++ PW LS + V+ G G + Sbjct: 289 GRVSLGEGAVKPWQTDAYYECQAELKTFARKRGVPLDLPWDELSDDQKAWVIEGEGDFD- 347 Query: 357 EFKYMNDRGDTSIRRHPFEGVLHNMERRYKETESSA----VREELAKFISNRPCASCEGT 412 +G+ + + R + E+ + +R L+++ S PC +C+G Sbjct: 348 ------------------DGLWYGIRRFFDWLETKSYKMHIRVLLSRYRSYEPCKACQGA 389 Query: 413 RLRRE-------------------ARHV---------YVENTPLPAISDM---SIGHAME 441 RL+ + AR + +E P + D+ + Sbjct: 390 RLKPDSLLWRLGTQADADGVLEPGARFLPAGISWSRDLLETLPGLCLHDLMQVPLARCKA 449 Query: 442 FFNNLKLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQI 501 FF+ L L + + +L EI RL +L VGL YLTL R + TLSGGE QRI L + + Sbjct: 450 FFDQLHLPAPLDEATDLLLAEIRARLNYLCEVGLGYLTLDRQSRTLSGGEVQRINLTTAL 509 Query: 502 GAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIG 561 G LV ++VLDEPSIGLH RD +R++G L LRD GN+++VVEHD +RAAD ++D+G Sbjct: 510 GTSLVNTLFVLDEPSIGLHPRDMDRVVGVLRRLRDAGNSLLVVEHDPQVMRAADRILDMG 569 Query: 562 PGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEVPKKRVPANPEKV-LKLTGARG 620 PG G GGEVV G I+ +SLTGQY+SG++++ +P P + + V L+L GA Sbjct: 570 PGPGERGGEVVFFGTPAQILRSRQSLTGQYLSGRKQVALPSASRPPDGDTVWLELRGAAQ 629 Query: 621 NNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAEPAPYRDIQGLE 680 +NLK + P+G C+TGVSGSGKSTLI D L+P A +L G + + G E Sbjct: 630 HNLKGIDARFPLGRLVCVTGVSGSGKSTLIQDLLYP-ALAKLKGRPEYPAGAFGSLIGHE 688 Query: 681 HFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESRARGYTPGRFSFNVRGGRC 740 D V+ +DQSPIGRT RS PA+Y G F +R+LFA P ++ RGYT G FSFN GRC Sbjct: 689 SLDAVVMVDQSPIGRTARSCPASYVGAFDAIRKLFAEEPLAKERGYTAGTFSFNSGNGRC 748 Query: 741 EACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKYKGKTIHE-----VLDMTIEE 795 C G G VEM FL D+Y+ C +C G+RY E L++K G H VL MT+ E Sbjct: 749 PVCTGSGFEHVEMQFLSDVYLRCGECDGRRYRPEVLQVKALGAEGHAADLSGVLGMTVTE 808 Query: 796 AREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSK--------- 846 A FF VP + + L+ L VGL Y+RLGQ TLSGGEAQR+KLA L + Sbjct: 809 ALAFFAHVPEVQQSLEPLAAVGLEYLRLGQPVPTLSGGEAQRLKLAGHLVQHAGRNVGRA 868 Query: 847 -----------------RGTGQ---TLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIV 886 R TG+ TL++LDEPTTGLHF DI +LL L +L+ QG++++ Sbjct: 869 SARHAAASTGTASRAEARPTGERGGTLFLLDEPTTGLHFEDIARLLKALRRLQAQGHSLI 928 Query: 887 VIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLK 937 VIEHNLDVI+ ADW++DLGPEGG GGGEI+ GTP V + SHT L+ Sbjct: 929 VIEHNLDVIRAADWLIDLGPEGGDGGGEIVCEGTPAQVMKHPGSHTGAALR 979 Score = 517 bits (1331), Expect = e-145, Method: Compositional matrix adjust. Identities = 284/596 (47%), Positives = 378/596 (63%), Gaps = 41/596 (6%) Query: 385 YKETESSAVREELAKFISNRPCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFN 444 + E S E L S + C +C G RLR EA V + +S + + A +F Sbjct: 1289 FDEAHSGEEGEWLEAGESRQTCPACHGQRLRPEALAVRFRERSIGELSALPVKAARAWFE 1348 Query: 445 NLKLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAG 504 LK + + IA IL EI RL FL VGL YL+L R A TLSGGEAQRIRLA+Q+G Sbjct: 1349 KLKPKARESAIARDILPEIRGRLAFLEQVGLGYLSLDRGAPTLSGGEAQRIRLAAQLGTN 1408 Query: 505 LVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGA 564 L GV Y+LDEP+IGLH RDN LL TL L+ GNTV+VVEHDED IR+A+HVID+GPGA Sbjct: 1409 LQGVCYILDEPTIGLHPRDNRMLLDTLHRLQAKGNTVVVVEHDEDTIRSAEHVIDLGPGA 1468 Query: 565 GVHGGEVVAEGPLEAIMAVPESLTGQYMSGK-RKIEVPKKRVPANPEKVLKLTGARGNNL 623 G GG +VA+G ++ +M PESLTG++++ R V ++ A L + GA NNL Sbjct: 1469 GERGGRLVAQGSVKQVMKAPESLTGRFLAHPLRHPLVARRPTKAGQAPALSIEGACLNNL 1528 Query: 624 KDVTLTLPVGLFTCITGVSGSGKSTLINDTLF-PIAQRQLNGATIAEPAPYRDIQGLEHF 682 ++V +++P+ C+TGVSGSGKSTL+ + L+ +A+R D++G + Sbjct: 1529 RNVAVSIPLNRLVCVTGVSGSGKSTLVREVLYRNLAERVGKRGRKPALTGCADLEGWQDL 1588 Query: 683 DKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESRARGYTPGRFSFNVRGGRCEA 742 ++V+++DQ+PIGRTPRS PATY GVF +R+L+A PE+R RG+ RFSFN GGRC Sbjct: 1589 ERVLEVDQTPIGRTPRSCPATYVGVFDRIRKLYAETPEARLRGWNASRFSFNTPGGRCAV 1648 Query: 743 CQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDA 802 C+G GV ++EM FLPD+ VPC+ C G RY RETLE ++K ++I +VL+M+++EA FF A Sbjct: 1649 CEGQGVRRIEMSFLPDVVVPCEACGGGRYGRETLEARFKDRSIADVLNMSVDEAVPFFTA 1708 Query: 803 VPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRG-------------- 848 PA+ LQ L DVGL Y+RLGQ + TLSGGEAQR+KL ELS+ G Sbjct: 1709 HPAIHHALQLLQDVGLGYLRLGQPSPTLSGGEAQRMKLVTELSRSGKTFANTVGRASARQ 1768 Query: 849 -------------------TGQ-----TLYILDEPTTGLHFADIQQLLDVLHKLRDQGNT 884 +GQ +LYILDEPT GLH AD+++L+ VLH+L + G++ Sbjct: 1769 PEAWTGIASRAEARPTARPSGQARSRGSLYILDEPTVGLHMADVEKLIRVLHRLVEAGHS 1828 Query: 885 IVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLKPML 940 ++VIEHNLDVI ADWI+D+GPEGG GGG + GTPE++ SHT R L L Sbjct: 1829 VIVIEHNLDVIAEADWIIDMGPEGGDGGGRVAGQGTPESMVR-RKSHTGRMLGAFL 1883 Score = 231 bits (588), Expect = 1e-58, Method: Compositional matrix adjust. Identities = 116/283 (40%), Positives = 176/283 (62%), Gaps = 2/283 (0%) Query: 3 KIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYAR 62 +I + AR HNLK +++ +PRD+ V+TG+SGSGKS++AFD L+ EGQRRY+ESL+AYAR Sbjct: 1004 EIRISNAREHNLKGVDIQVPRDRFTVITGVSGSGKSTVAFDILFNEGQRRYLESLNAYAR 1063 Query: 63 QFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCPD 122 + +P+VD + G+ P ++IEQ+++ +STVGT+TE+H +LRLL+ ++G CPD Sbjct: 1064 SLVQPASRPEVDAVTGIPPTVAIEQRTSRGGHKSTVGTLTEVHHFLRLLYVKLGTQYCPD 1123 Query: 123 HDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARIDGE 182 DVP+ QT ++ +L Q + + + +LAP++ RKG +T ++G+ R+DGE Sbjct: 1124 CDVPIEPQTPEAILAALLKQWKSREVHVLAPLVSARKGYYTDLARWAHNRGFAHLRVDGE 1183 Query: 183 VCDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVADMDDPKA 242 + P+L+ ++H IE+ V KV L E+ L+L G VA + +A Sbjct: 1184 LIPTDPWPRLDRYREHDIELPVASLKVTPKAEAALREAIARGLDLGKGMIRVAPLSG-RA 1242 Query: 243 EELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGV 285 E+ L+S ACP C S +PRLFS+N G C TC G GV Sbjct: 1243 EK-LYSTERACPSCARSFDVPDPRLFSYNARHGWCRTCFGTGV 1284 Score = 151 bits (381), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 87/234 (37%), Positives = 128/234 (54%), Gaps = 26/234 (11%) Query: 728 PGRFSFNVRGGRCEACQGDGVI-----------KVEMHFLPDIYVPCDQCKGKRYNRETL 776 P FS+N R G C C G GV+ + E + C C G+R E L Sbjct: 1264 PRLFSYNARHGWCRTCFGTGVVLKGFDEAHSGEEGEWLEAGESRQTCPACHGQRLRPEAL 1323 Query: 777 EIKYKGKTIHEVLDMTIEEAREFF--------------DAVPALARKLQTLMDVGLTYIR 822 ++++ ++I E+ + ++ AR +F D +P + +L L VGL Y+ Sbjct: 1324 AVRFRERSIGELSALPVKAARAWFEKLKPKARESAIARDILPEIRGRLAFLEQVGLGYLS 1383 Query: 823 LGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQG 882 L + A TLSGGEAQR++LA +L G YILDEPT GLH D + LLD LH+L+ +G Sbjct: 1384 LDRGAPTLSGGEAQRIRLAAQLGTNLQG-VCYILDEPTIGLHPRDNRMLLDTLHRLQAKG 1442 Query: 883 NTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFL 936 NT+VV+EH+ D I++A+ ++DLGP G GG ++ G+ + V + S T RFL Sbjct: 1443 NTVVVVEHDEDTIRSAEHVIDLGPGAGERGGRLVAQGSVKQVMKAPESLTGRFL 1496 Score = 131 bits (329), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 111/357 (31%), Positives = 162/357 (45%), Gaps = 65/357 (18%) Query: 406 CASCEGTRLRREARHVYV-----ENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKIL 460 C C+G R R E V L + M++ A+ FF ++ Sbjct: 771 CGECDGRRYRPEVLQVKALGAEGHAADLSGVLGMTVTEALAFFAHVP------------- 817 Query: 461 KEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQI------GAGLV-------- 506 E+ L+ L VGL YL L + TLSGGEAQR++LA + G Sbjct: 818 -EVQQSLEPLAAVGLEYLRLGQPVPTLSGGEAQRLKLAGHLVQHAGRNVGRASARHAAAS 876 Query: 507 ----------------GVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDA 550 G +++LDEP+ GLH D RLL L L+ G+++IV+EH+ D Sbjct: 877 TGTASRAEARPTGERGGTLFLLDEPTTGLHFEDIARLLKALRRLQAQGHSLIVIEHNLDV 936 Query: 551 IRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEVPK------KR 604 IRAAD +ID+GP G GGE+V EG +M P S TG + + + + ++ Sbjct: 937 IRAADWLIDLGPEGGDGGGEIVCEGTPAQVMKHPGSHTGAALRAEAAGSIAESSAASYRK 996 Query: 605 VPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQ--- 661 ++++ AR +NLK V + +P FT ITGVSGSGKST+ D LF QR+ Sbjct: 997 AAKTVRAEIRISNAREHNLKGVDIQVPRDRFTVITGVSGSGKSTVAFDILFNEGQRRYLE 1056 Query: 662 -LN--GATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELF 715 LN ++ +PA ++ + + I+Q RT R + G T V Sbjct: 1057 SLNAYARSLVQPASRPEVDAVTGIPPTVAIEQ----RTSRGGHKSTVGTLTEVHHFL 1109 Score = 62.4 bits (150), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 37/116 (31%), Positives = 61/116 (52%), Gaps = 5/116 (4%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 63 + + GA +NL+N+ + IP ++L+ VTG+SGSGKS+L + LY R E + R+ Sbjct: 1518 LSIEGACLNNLRNVAVSIPLNRLVCVTGVSGSGKSTLVREVLY----RNLAERVGKRGRK 1573 Query: 64 FLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPR 119 +L D++ + L + ++Q PRS T + D +R L+A E R Sbjct: 1574 -PALTGCADLEGWQDLERVLEVDQTPIGRTPRSCPATYVGVFDRIRKLYAETPEAR 1628 >UniRef50_C4RNF2 Excinuclease ABC, A subunit n=1 Tax=Micromonospora sp. ATCC 39149 RepID=C4RNF2_9ACTO Length = 894 Score = 644 bits (1661), Expect = 0.0, Method: Compositional matrix adjust. Identities = 392/960 (40%), Positives = 541/960 (56%), Gaps = 104/960 (10%) Query: 2 DKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYA 61 ++I +RG R HNL+ L +PR L VVTG+SGSGKSSLAFDT+YAEG R+Y++SLSA+ Sbjct: 5 ERIVLRGVRQHNLRIGELSLPRGGLTVVTGVSGSGKSSLAFDTIYAEGYRQYLDSLSAHV 64 Query: 62 RQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGE---P 118 R+ L + KP VD + GLSP ++IEQ++ S NPRS VGTITEI D LRLLFAR G Sbjct: 65 RRRLPKVSKPTVDWVSGLSPTVAIEQRTISRNPRSNVGTITEISDRLRLLFARTGRHDCR 124 Query: 119 RCPDHDVPLAAQTVSQM---------VDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENL 169 +C PL V V ++P+G +L + E + L Sbjct: 125 KCGTEVTPLDTAAHLAALAEAATEGPVRLVATEPDGGETEVL-------RLEAAPDADTL 177 Query: 170 ASQGYIRARIDGEVCDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSG 229 A G + R EL+ + + V+ DR VR Sbjct: 178 ADAGLLVER--------------ELRAERRLTVLRDRTPVRH------------------ 205 Query: 230 GTAVVADMDDPKAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYF 289 +A + CP CG + F+ N+PAG C C GLG Sbjct: 206 -----------------LAAGWVCPYCGTEVHATSSDWFTPNSPAGMCDHCQGLGYTYRV 248 Query: 290 DPDRVIQNPELSLAGGAIRGW-DRR----NFYYFQMLKSLADHYKFDVEAPWGSLSANVH 344 D ++ + S+ GA+ + DRR ++ + L L ++ PW L V Sbjct: 249 DAALLVGDARESVRSGALTFYGDRRRGKKTWWPQRELPDLLAEAGASLDTPWEDLPTEVG 308 Query: 345 KVVLYGSGKENIEFKYMNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNR 404 +L GD + ++ER +K+ +S + F+ R Sbjct: 309 DRIL----------------GDLT----------EHIERLFKDADSPERKSFYQGFMVQR 342 Query: 405 PCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLK--LAGQ-RAKIAEKILK 461 C SC GTR EA V + + ++ ++I ++ ++ LAG+ A+++ ++L Sbjct: 343 QCGSCGGTRHAAEALAVRLAGRNIAEVNGLAISRLRDWVGEVRAELAGKFLAELSAELLD 402 Query: 462 EIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQ 521 ++ R++FL+ VGL+YL+L RSA TLS GE QR+RLA Q+G+GLVGV+YVLDEPSIGLH Sbjct: 403 QVDARVEFLLEVGLHYLSLDRSAPTLSAGEGQRLRLARQLGSGLVGVVYVLDEPSIGLHA 462 Query: 522 RDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIM 581 RDN RL+G L L + GNTV+VVEHD + + AAD+++D+GPGAG GG VVA GP ++ Sbjct: 463 RDNGRLIGMLRRLAEAGNTVLVVEHDRETMEAADYLVDMGPGAGTRGGLVVAAGPTAEVI 522 Query: 582 AVPESLTGQYMSGKRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGV 641 A S T Y+ +R + P+ ++ L+LTGAR NNL+ V LT+P+G+ TC+TGV Sbjct: 523 AHRTSATSAYLRNERTVVSPRPERRRPDDRRLELTGARLNNLRGVDLTIPIGVLTCVTGV 582 Query: 642 SGSGKSTLINDTLFPIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNP 701 SGSGKS+LI TL P + P+ ++G EH +V + Q IG + RS P Sbjct: 583 SGSGKSSLITRTLQPAVDTAVRWRR-TPVGPFDRLRGAEHVRRVTTVTQDSIGGSSRSTP 641 Query: 702 ATYTGVFTPVRELFAGVPESRARGYTPGRFSFNVR-GGRCEACQGDGVIKVEMHFLPDIY 760 ATY GVF +R+LFA E+ R Y+ FSFN GGRC+ C G GV++VEM FL D+ Sbjct: 642 ATYLGVFDEIRKLFARTDEAVRRRYSTAMFSFNTEAGGRCDRCAGKGVVRVEMLFLADVS 701 Query: 761 VPCDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTY 820 V C C G RY+ LEI ++G+TI E L + + EA E + VPA+A L+TL VGL Y Sbjct: 702 VRCPSCDGLRYSARVLEITHRGRTIAETLALEVGEAIELYADVPAIAYPLRTLSQVGLGY 761 Query: 821 IRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRD 880 +RLGQ TLSGGEAQR+KL+REL +R G TLY++DEPTTGLHF+D+Q LLDVLH L D Sbjct: 762 LRLGQDTGTLSGGEAQRLKLSRELLRRDEGGTLYLIDEPTTGLHFSDVQVLLDVLHDLVD 821 Query: 881 QGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLKPML 940 +GNT+VVIEH+++ +DWIVDLGP GG GG ++ +G PE +A S A +L L Sbjct: 822 RGNTVVVIEHSVEFAAASDWIVDLGPGGGEDGGRLVAAGPPELLATHPDSAIAPYLARQL 881 Score = 96.7 bits (239), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 72/208 (34%), Positives = 108/208 (51%), Gaps = 22/208 (10%) Query: 406 CASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGD 465 C SC+G R + + + +G A+E + ++ I Sbjct: 704 CPSCDGLRYSARVLEITHRGRTIAETLALEVGEAIELYADVP--------------AIAY 749 Query: 466 RLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQI---GAGLVGVMYVLDEPSIGLHQR 522 L+ L VGL YL L + TLSGGEAQR++L+ ++ G G +Y++DEP+ GLH Sbjct: 750 PLRTLSQVGLGYLRLGQDTGTLSGGEAQRLKLSRELLRRDEG--GTLYLIDEPTTGLHFS 807 Query: 523 DNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMA 582 D + LL L L D GNTV+V+EH + A+D ++D+GPG G GG +VA GP E + Sbjct: 808 DVQVLLDVLHDLVDRGNTVVVIEHSVEFAAASDWIVDLGPGGGEDGGRLVAAGPPELLAT 867 Query: 583 VPESLTGQYMSGKRKIEVPKKRVPANPE 610 P+S Y++ R++ + R P NPE Sbjct: 868 HPDSAIAPYLA--RQLALTAARRP-NPE 892 Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 43/115 (37%), Positives = 61/115 (53%), Gaps = 7/115 (6%) Query: 608 NPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATI 667 NPE+++ L G R +NL+ L+LP G T +TGVSGSGKS+L DT++ RQ + Sbjct: 3 NPERIV-LRGVRQHNLRIGELSLPRGGLTVVTGVSGSGKSSLAFDTIYAEGYRQYLDSLS 61 Query: 668 AE-----PAPYR-DIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFA 716 A P + + + + I+Q I R PRSN T T + +R LFA Sbjct: 62 AHVRRRLPKVSKPTVDWVSGLSPTVAIEQRTISRNPRSNVGTITEISDRLRLLFA 116 >UniRef50_Q7URK7 Excinuclease ABC subunit A n=1 Tax=Rhodopirellula baltica RepID=Q7URK7_RHOBA Length = 1031 Score = 637 bits (1644), Expect = 0.0, Method: Compositional matrix adjust. Identities = 386/1007 (38%), Positives = 564/1007 (56%), Gaps = 93/1007 (9%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 63 I VRG R HNL+++++ IPR +L+V+ GLSGSGK+SLA DTLYAEGQR Y+ES SAY RQ Sbjct: 48 ISVRGCRVHNLRDVDVDIPRGELVVICGLSGSGKTSLALDTLYAEGQRSYIESFSAYTRQ 107 Query: 64 FLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCPDH 123 +L+ ++KPD D I G+ PAI++ + S RSTV T TEI ++LRLLFAR E C Sbjct: 108 YLNQLDKPDCDSISGIPPAIAVTRASAVKTNRSTVATSTEIAEHLRLLFARASELVCYQC 167 Query: 124 DVPLAAQTVSQMVDNVLSQPEGK--RLMLLAPIIKERKGEHTKTLENLASQGYIRARIDG 181 P+ + Q V LS P K R ++ + + ++ L L +G++R + G Sbjct: 168 GQPVVIDS-PQSVAAQLSDPAAKVQRAIVGFELWLPDRKAASEILLGLQQEGFVRLILKG 226 Query: 182 EVCDLSDPPKLELQKK-----HTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVAD 236 E LSD + ++ K+ T VVVDR +++ R ES ETA+ G AVV Sbjct: 227 ETFQLSDEDRSKMAKRIGSKGVTATVVVDRLSSSSEMS-RWTESLETAMTEGNGRAVVLF 285 Query: 237 MDDPK------------AEELL---FSANFACPICGYSMRELEPRLFSFNNPAGACPTCD 281 D + E+L S C C + PR F+FN+P GACP C+ Sbjct: 286 QSDAEDRFKGLPTQSIDGREILQRVASDRQRCDHCDIEYPDPVPRAFNFNHPMGACPECE 345 Query: 282 GLGVQQYFDPDRVIQNPELSLAGGAIRGWDRRNFYY-FQMLKSLADHYKFDVEAPWGSLS 340 G G D DR++ + S+ GAI W+ ++ + + L +LAD Y V+ P+ SL Sbjct: 346 GFGDVIGIDMDRIVPDKSKSIREGAIAPWNAPSYQHELEELLALADDYDLPVDVPFSSLK 405 Query: 341 ANVHKVVLYGSGKENIEFKYMNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKF 400 K++ G +R F G+ ++ +R +++ Sbjct: 406 KKHLKLIHEG------------------VRERKFGGLNGFFAWLDRKKYKMHIRVFASRY 447 Query: 401 ISNRPCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNL-------------- 446 S R C +C G RL+ E+ V + + M +FF++ Sbjct: 448 RSYRTCPACGGDRLKPESLAYKVGGHNVSEMLAMRCDELDQFFSDWFGADAENATATDAT 507 Query: 447 --------KLAG-------------QRAKIAEKILKEIGDRLKFLVNVGLNYLTLSRSAE 485 +L G +R IA + +++I DRL++L VGL YL L+R+ Sbjct: 508 TEGEIVGERLVGYQTQAELLIADQQRRHTIASEPVRQIRDRLRYLDQVGLGYLQLNRTLR 567 Query: 486 TLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVE 545 TLSGGE QRI L +G+ LVG++YVLDEP+ GLH D E+L+ + LRD GNTV+ VE Sbjct: 568 TLSGGETQRIALTLALGSTLVGMLYVLDEPTAGLHPIDVEQLVDAITQLRDRGNTVVAVE 627 Query: 546 HDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRK----IEVP 601 H++ I+ AD VI+IGPGAGV GG V EG + ++ +SLTG+Y+ RK +++ Sbjct: 628 HNDTLIQLADRVIEIGPGAGVGGGLVTFEGTPKQLVKAKDSLTGRYLGKNRKRSIQLDLT 687 Query: 602 KKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQ 661 R P LKL+GA G+NL+D+ + P+G T +TG SGSGKS+LI+DTLF + Sbjct: 688 DGRAPTGS---LKLSGASGHNLRDIDVEFPLGCLTVVTGRSGSGKSSLIHDTLFGAVSTR 744 Query: 662 L--------NGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRE 713 L + +A P++ ++G D + +DQSPI R+PRS P T+ F P+R+ Sbjct: 745 LAERRGEVPSADIVANTLPFQSLRGENAIDDCLLVDQSPISRSPRSCPVTFAKAFDPIRQ 804 Query: 714 LFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNR 773 FA +++ R + PG FSFN G+C AC+G GV ++M FL D+ + C +C+G+RY Sbjct: 805 AFAETVDAKIRNFKPGHFSFNSSAGQCSACEGAGVQTIDMQFLADVSMRCGECRGRRYRD 864 Query: 774 ETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGG 833 E L+++Y+ TI +VL+MT+ EA EFF +P + KL+ L+DVGL Y+ LGQ ATTLS G Sbjct: 865 EVLQVRYRDCTIADVLEMTVREASEFFREMPKVQNKLKRLIDVGLDYVALGQPATTLSSG 924 Query: 834 EAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLD 893 EAQR+KLA L+ +TL+++DEPTTGLHF DI++LL L D+G+++VVIEH+ Sbjct: 925 EAQRLKLAAFLAGSSKRRTLFLMDEPTTGLHFDDIRRLLKCFDALIDEGHSLVVIEHHPM 984 Query: 894 VIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLKPML 940 ++ AD I+++GP GG+I+ SGT + VA S T + L+ ML Sbjct: 985 LMAAADQIIEVGPGAAENGGQIVASGTRDEVASVNDSLTGQILRQML 1031 >UniRef50_A1WZ98 UvrA family protein n=2 Tax=Proteobacteria RepID=A1WZ98_HALHL Length = 1896 Score = 637 bits (1643), Expect = 0.0, Method: Compositional matrix adjust. Identities = 412/1034 (39%), Positives = 559/1034 (54%), Gaps = 133/1034 (12%) Query: 2 DKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYA 61 + I +RGAR HNL+ ++L +P +LIVVTG+SGSGKSSLAFDT+YAEGQRRYVE+ SAYA Sbjct: 3 EPIRIRGARQHNLQGLDLDLPAGELIVVTGVSGSGKSSLAFDTVYAEGQRRYVETFSAYA 62 Query: 62 RQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCP 121 RQFL M++P V+ I+G+ PAI+I+Q + RSTVGT+TE+ D+L+LLFAR +P C Sbjct: 63 RQFLERMDRPHVERIDGVPPAIAIDQVNPVRTSRSTVGTMTELSDHLKLLFARAAQPYCS 122 Query: 122 DHDVPLAAQTVSQMVDNVLS------QPEGKRLMLLAPIIKERKGEHTKTLENLASQGYI 175 P+ T + + +L+ P G R+ + + + + + L+SQGY Sbjct: 123 GCGRPVRPDTPESVAEGLLAGEGAAPWPPGTRVAVTFFVAVPDGLDRDELRQMLSSQGYT 182 Query: 176 RARIDGEVCDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVA 235 R ++ +EVV DR ++ + RL E+ E AL+ G V Sbjct: 183 RI----------------YERPGGVEVVQDRLRLDAERRGRLIEAVEIALDKGRGRCQVW 226 Query: 236 DMD---DPKAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPD 292 + +P E +SA F C C LFSFN+P GAC TC G G DPD Sbjct: 227 ALGEDREPAGEPRRYSATFHCAGCDRDYPRPTAELFSFNSPVGACDTCRGFGRNMEIDPD 286 Query: 293 RVIQNPELSLAGGAIRGWDRRNFYYFQM-LKSLADHYKFDVEAPWGSLSANVHKVVLYGS 351 VI +P SLA GAI+ + Q L A V+ PW L A + V G Sbjct: 287 LVIPDPTRSLADGAIKPFRGGASVECQEDLLRAARRRGVAVDVPWQELDAADRQWVWDG- 345 Query: 352 GKENIEFKYMNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEG 411 DR S R + G +ER+ + VR +L+++ + R C C+G Sbjct: 346 ----------EDRWGRSGRWYGVRGYFDYLERKSYKMH---VRVQLSRYRTYRTCPDCQG 392 Query: 412 TRL-----------RREA------------RHVYVENTPLPAISDMSIGHAM-------- 440 RL R+EA RH+ +++ L A+ +++ H + Sbjct: 393 ARLVPEALDFRLGGRQEADAVLAPEQRFRPRHLELDDAALAALPGLTL-HDLATLPLERL 451 Query: 441 -EFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLAS 499 +FF+ L L + A +L EI R+ +L VGL YLTL R + TLSGGE QRI L + Sbjct: 452 QQFFDGLVLPPPLDEAAATVLDEIRSRVGYLNEVGLGYLTLDRQSRTLSGGEVQRINLTT 511 Query: 500 QIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVID 559 +G LV ++VLDEPSIGLH RD +RL+G L LRD GN+++VVEHD + AAD +ID Sbjct: 512 ALGTSLVNTLFVLDEPSIGLHPRDVDRLVGILQRLRDAGNSLLVVEHDPQVMAAADRIID 571 Query: 560 IGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIE-------------------- 599 +GPG G GG VV G + A +S T Y++G+R++ Sbjct: 572 MGPGPGERGGRVVFNGAPAELYAA-DSATADYLTGRRRVSRRDGCAPGAWGAGEELSEAR 630 Query: 600 ----------------VPKKRVPANPE---------KVLKLTGARGNNLKDVTLTLPVGL 634 +KR ++P L + GAR +NL+ + + +P+G Sbjct: 631 LAGRTRRDARSAGPDGAGEKRSASSPAPHQAAAADGPALTIRGARAHNLQGIDVAIPLGG 690 Query: 635 FTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIG 694 C+TGVSGSGKSTL D L+ RQ G + P + I G E V +DQSPIG Sbjct: 691 LVCLTGVSGSGKSTLAEDILYRGLLRQ-QGEAVEAPGEHDGIDGAEAITAVALVDQSPIG 749 Query: 695 RTPRSNPATYTGVFTPVRELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMH 754 ++ RS P +YTG P+R+ FA P +R RGYT G FSFN GRC C+G G VEM Sbjct: 750 KSARSCPVSYTGALDPIRKRFAAAPLARERGYTAGAFSFNAGNGRCPTCKGSGFEHVEMQ 809 Query: 755 FLPDIYVPCDQCKGKRYNRETLEIKYKG-----KTIHEVLDMTIEEAREFFDAVPALARK 809 FL D+Y+ C C G+R+ E LE++ +G +IHEVL MT +EA EFF + R+ Sbjct: 810 FLSDVYLACPDCDGRRFRAEVLEVQVEGPEGRRASIHEVLAMTADEAVEFFADSREVVRR 869 Query: 810 LQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQ-------TLYILDEPTTG 862 L+ L VGL Y+RLGQ TLSGGEAQR+KLA L++RG + TL I DEPTTG Sbjct: 870 LEPLRAVGLGYLRLGQPVPTLSGGEAQRLKLAGHLAERGKAKGGESGAGTLLIFDEPTTG 929 Query: 863 LHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPE 922 LHF+D Q LLD +L D G +++VIEHNLD+I ADWI+DLGPEGG GGG +L SGTP Sbjct: 930 LHFSDCQVLLDAFQRLVDAGYSLLVIEHNLDLIANADWILDLGPEGGEGGGRLLASGTPA 989 Query: 923 TVAECEASHTARFL 936 +A A+ T R L Sbjct: 990 QLA-AHATDTGRAL 1002 Score = 537 bits (1384), Expect = e-151, Method: Compositional matrix adjust. Identities = 279/551 (50%), Positives = 363/551 (65%), Gaps = 16/551 (2%) Query: 404 RPCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEI 463 R C +C+G RL AR V + ++ S+ + L L + A I ++ E+ Sbjct: 1340 RVCPACQGGRLNPVARAVRFHGRSITEVTATSVAELRPWLEGLSLDDREAAIGGDVIAEV 1399 Query: 464 GDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRD 523 RL FL VGL YLTL R+A TLSGGEAQRIRLA+ +GAGL GV YVLDEP+IGLH RD Sbjct: 1400 RARLAFLERVGLGYLTLDRAAPTLSGGEAQRIRLAASLGAGLQGVCYVLDEPTIGLHARD 1459 Query: 524 NERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAV 583 N LLG L L + GNTV+VVEHDE+ IRAA+H++D+GPGAG HGG VVAEG L A+ Sbjct: 1460 NAMLLGALRELAEAGNTVVVVEHDEETIRAAEHLVDLGPGAGRHGGRVVAEGDLAAVTGN 1519 Query: 584 PESLTGQYMSGKRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSG 643 +SLTG+ ++ + +R A P L +TGA +NL+ V + LP+G +TGVSG Sbjct: 1520 ADSLTGRVLAHPPRHPTRARRSEA-PAAQLTVTGAHRHNLQQVDVALPLGRLIGVTGVSG 1578 Query: 644 SGKSTLINDTLFPIAQRQLN---GATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSN 700 SGKS+L+ + + P + L GA + EP + + G EH +V+++DQ+PIGRTPRS Sbjct: 1579 SGKSSLVREVIEPSVRALLGRKRGAPVPEPVGCQAVAGTEHLRRVLEVDQTPIGRTPRSC 1638 Query: 701 PATYTGVFTPVRELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIY 760 PATY G++ P+R LFAG E+R RG+ RFSFN +GGRCEAC G GV VEM FLPD+ Sbjct: 1639 PATYVGIWDPIRRLFAGTEEARLRGWDAARFSFNTKGGRCEACSGQGVKTVEMSFLPDVK 1698 Query: 761 VPCDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTY 820 VPC+ C G R++ ET +++Y G +I +VL ++IEEA+ FF A P + L+ L DVGL Y Sbjct: 1699 VPCEVCGGTRFDEETRQVRYAGHSIDQVLALSIEEAQAFFSAHPRIHHVLRLLCDVGLGY 1758 Query: 821 IRLGQSATTLSGGEAQRVKLARELSK-----------RGTGQTLYILDEPTTGLHFADIQ 869 + LGQ + TLSGGEAQR+KL EL+K R TLY+LDEPT GLH AD+Q Sbjct: 1759 LSLGQPSPTLSGGEAQRLKLVTELAKARPVDGGPGRARQAAPTLYLLDEPTVGLHIADVQ 1818 Query: 870 QLLDVLHKLRDQGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEA 929 +L DV H L D G+T+VVIEHNLDVI AD ++DLGPEGG GG ++ SG PE VA + Sbjct: 1819 RLTDVFHALVDAGHTVVVIEHNLDVIAEADHVIDLGPEGGDAGGSVVGSGAPEAVAAMD- 1877 Query: 930 SHTARFLKPML 940 + T R L+ L Sbjct: 1878 TPTGRALQAFL 1888 Score = 228 bits (580), Expect = 1e-57, Method: Compositional matrix adjust. Identities = 128/289 (44%), Positives = 181/289 (62%), Gaps = 1/289 (0%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 63 IEV AR HNL+NI++ IPRD+L VVTG+SGSGKS+LAFD L+AEGQRRY+ESL+AYARQ Sbjct: 1042 IEVHQAREHNLRNIDVTIPRDRLTVVTGVSGSGKSTLAFDILFAEGQRRYLESLNAYARQ 1101 Query: 64 FLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCPDH 123 + +PDV + G+ PA++IEQ+++ RSTV T+TEI+ YLRLL+ R+G CP+ Sbjct: 1102 LVQPASRPDVGAVTGIPPAVAIEQRTSRGGYRSTVATLTEIYHYLRLLYLRLGVQYCPEC 1161 Query: 124 DVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARIDGEV 183 V + AQT + +L G+R++ AP++ RKG + + A +GY R+DGE+ Sbjct: 1162 QVAIEAQTPVGIAARLLRDYRGQRIVFYAPLVVARKGIYKELAAWAAGRGYEALRVDGEL 1221 Query: 184 CDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVADMDDPKAE 243 + P+L+ ++H I++ + +V+ D L E E AL+ GT +A D Sbjct: 1222 QPTAQWPRLDRYREHDIDLPLGSLEVQPDAEAALRERLEEALDHGDGTVRIAPQDGGVEA 1281 Query: 244 ELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPD 292 E ++S ACP CG E +PRLFSFN+ G C C G G+ DPD Sbjct: 1282 ERVWSTRRACPGCGQGFAEPDPRLFSFNSRHGWCSGCHGTGL-LVRDPD 1329 Score = 132 bits (332), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 83/231 (35%), Positives = 115/231 (49%), Gaps = 27/231 (11%) Query: 728 PGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVP--------CDQCKGKRYNRETLEIK 779 P FSFN R G C C G G++ + PD C C+G R N ++ Sbjct: 1303 PRLFSFNSRHGWCSGCHGTGLLVRD----PDEAEAAELEAARVCPACQGGRLNPVARAVR 1358 Query: 780 YKGKTIHEVLDMTIEEAREFF--------------DAVPALARKLQTLMDVGLTYIRLGQ 825 + G++I EV ++ E R + D + + +L L VGL Y+ L + Sbjct: 1359 FHGRSITEVTATSVAELRPWLEGLSLDDREAAIGGDVIAEVRARLAFLERVGLGYLTLDR 1418 Query: 826 SATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTI 885 +A TLSGGEAQR++LA L G Y+LDEPT GLH D LL L +L + GNT+ Sbjct: 1419 AAPTLSGGEAQRIRLAASLGA-GLQGVCYVLDEPTIGLHARDNAMLLGALRELAEAGNTV 1477 Query: 886 VVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFL 936 VV+EH+ + I+ A+ +VDLGP G GG ++ G V S T R L Sbjct: 1478 VVVEHDEETIRAAEHLVDLGPGAGRHGGRVVAEGDLAAVTGNADSLTGRVL 1528 Score = 117 bits (294), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 106/341 (31%), Positives = 159/341 (46%), Gaps = 53/341 (15%) Query: 406 CASCEGTRLRREARHVYVEN-----TPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKIL 460 C C+G R R E V VE + + M+ A+EFF + + Sbjct: 818 CPDCDGRRFRAEVLEVQVEGPEGRRASIHEVLAMTADEAVEFFADSR------------- 864 Query: 461 KEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQI--------GAGLVGVMYVL 512 E+ RL+ L VGL YL L + TLSGGEAQR++LA + G G + + Sbjct: 865 -EVVRRLEPLRAVGLGYLRLGQPVPTLSGGEAQRLKLAGHLAERGKAKGGESGAGTLLIF 923 Query: 513 DEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVV 572 DEP+ GLH D + LL L D G +++V+EH+ D I AD ++D+GP G GG ++ Sbjct: 924 DEPTTGLHFSDCQVLLDAFQRLVDAGYSLLVIEHNLDLIANADWILDLGPEGGEGGGRLL 983 Query: 573 AEGPLEAIMAVPESLTGQYM--------------SGKRKIEVPK-----KRVPANPEKVL 613 A G A +A + TG+ + +G ++ P A + Sbjct: 984 ASG-TPAQLAAHATDTGRALADDWASQAVAPDEGAGAAALQHPAVAEAAAPYTAPAPAAI 1042 Query: 614 KLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQ----LNGAT--I 667 ++ AR +NL+++ +T+P T +TGVSGSGKSTL D LF QR+ LN + Sbjct: 1043 EVHQAREHNLRNIDVTIPRDRLTVVTGVSGSGKSTLAFDILFAEGQRRYLESLNAYARQL 1102 Query: 668 AEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVF 708 +PA D+ + + I+Q RS AT T ++ Sbjct: 1103 VQPASRPDVGAVTGIPPAVAIEQRTSRGGYRSTVATLTEIY 1143 Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 36/117 (30%), Positives = 55/117 (47%), Gaps = 3/117 (2%) Query: 3 KIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYAR 62 ++ V GA HNL+ +++ +P +LI VTG+SGSGKSSL + + + A Sbjct: 1547 QLTVTGAHRHNLQQVDVALPLGRLIGVTGVSGSGKSSLVREVIEPSVRALLGRKRGAPVP 1606 Query: 63 QFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPR 119 + + +H L + ++Q PRS T I D +R LFA E R Sbjct: 1607 EPVGCQAVAGTEH---LRRVLEVDQTPIGRTPRSCPATYVGIWDPIRRLFAGTEEAR 1660 >UniRef50_A9G6R8 Excinuclease ABC subunit A n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9G6R8_SORC5 Length = 1781 Score = 632 bits (1630), Expect = e-179, Method: Compositional matrix adjust. Identities = 366/938 (39%), Positives = 521/938 (55%), Gaps = 48/938 (5%) Query: 1 MDKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAY 60 M I +RGARTHNL+ I+L +L+ + G+SG+GKSSLA DTLY+EGQRR+VES S Y Sbjct: 1 MHSICLRGARTHNLQGIDLDFRPGELVAIAGVSGAGKSSLALDTLYSEGQRRFVESFSPY 60 Query: 61 ARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRC 120 ARQFL +E+P + +E ++ +++++++ + RSTV T+ ++ Y LFAR P C Sbjct: 61 ARQFLERLERPPIGALEPVAAGVAVDRRAPVKSSRSTVATMADLEPYFCALFAREAVPVC 120 Query: 121 PDHDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARID 180 P + P A ++ D S EG ++ PI E+L + GY R + Sbjct: 121 PSCEAPAARTDPARAADLAASAHEGATALVTYPIAVAGTERFLDVRESLLAAGYRRLLVR 180 Query: 181 GEVCDLSD-PPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVV----- 234 GE D+ P + +EV+VDR +V +RL + E A + SGG A + Sbjct: 181 GEARDIDTVAPSEAMSGADKVEVIVDRVRVAPRERRRLGAAIEEAWKGSGGDASLHLQRK 240 Query: 235 ADMDDPKAE---ELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDP 291 AD + L ACP C + P LFS+ +P GACP+C G G D Sbjct: 241 ADEQGGQGAGPTRLRLVRGLACPSCARAFDPPRPGLFSYQSPTGACPSCRGFGRTLGIDY 300 Query: 292 DRVIQNPELSLAGGAIRGWD-RRNFYYFQMLKSLADHYKFDVEAPWGSLSANVHKVVLYG 350 D+VI +P S+AGGAIR W+ R + ++L++ + + PW LS +VL G Sbjct: 301 DKVIPDPSKSIAGGAIRPWNGRSTTWERKLLRAFCERNGIRTDKPWRDLSDAQRALVLEG 360 Query: 351 SGKENIEFKYMNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCE 410 G S + + GV T VR LA++ + C++C Sbjct: 361 EG---------------SWTQGKYPGVKAWFRWLETRTYKMHVRVLLARYRTYDVCSACN 405 Query: 411 GTRLRREARHVYVENTPLPAISDMSIGHAMEFFN-NLKLAGQRAKIA--EKILKEIGDRL 467 G RL E+ V D++ H +E + +L +R + E +E+ RL Sbjct: 406 GKRLAPESLLYRVGGL------DLAAWHELELRDARARLEAERPQTGQGEMARRELIARL 459 Query: 468 KFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERL 527 +L VGL YL+L+R A TLSGGEAQR+ L + +G L G ++VLDEP++GLH D L Sbjct: 460 GYLERVGLGYLSLARQARTLSGGEAQRVALTAALGTSLTGALFVLDEPTVGLHPTDIPPL 519 Query: 528 LGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESL 587 + + L D GN V+V+EH+ IRA+D V+++GPGAG GG V +G + + A Sbjct: 520 IAAMRELADRGNAVLVIEHEPLVIRASDRVVELGPGAGKQGGRVTFDGRPDGLAA----- 574 Query: 588 TGQYMSGKRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKS 647 G S + + P ++ + GAR NNL+DVT+ +P+G+ ITG SGSGKS Sbjct: 575 RGPLASARAERRAPSGKI--------AIHGARENNLRDVTVDVPLGVVVAITGPSGSGKS 626 Query: 648 TLINDTLFPIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGV 707 TL+ND L+ R + P YR I+G V +DQ+P+GRT R NPATYTG Sbjct: 627 TLVNDVLYRHIARARGYKDVEAPGLYRRIEGTADIRTVTLVDQAPLGRTSRGNPATYTGA 686 Query: 708 FTPVRELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCK 767 + +R LFA PE+ AR PG FSFNV GRCEAC G+G +EM FL D+ + C CK Sbjct: 687 WNRIRALFAEQPEASARDLGPGHFSFNVALGRCEACAGEGSETIEMQFLADVSLTCPTCK 746 Query: 768 GKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSA 827 GKR+ E LE+K G+++ +VLD++I+EA E F PA+ R L L +GL Y+ LGQ Sbjct: 747 GKRFRDEVLEVKLDGRSVADVLDLSIDEAFEVFVGQPAIRRALAPLKQLGLGYLTLGQPL 806 Query: 828 TTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVV 887 +TLSGGEAQR+K+AR L + G L++LDEP+ GLH ++ L L L +G +++V Sbjct: 807 STLSGGEAQRLKIARALGEPCAG-ALFLLDEPSAGLHPEEVTHLNAALSVLVAEGASVIV 865 Query: 888 IEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVA 925 ++H+LDVI ADW+VDLGP GS GG ++ GTPE VA Sbjct: 866 VDHDLDVIAAADWVVDLGPGAGSEGGSVVAEGTPEEVA 903 Score = 478 bits (1229), Expect = e-133, Method: Compositional matrix adjust. Identities = 264/537 (49%), Positives = 357/537 (66%), Gaps = 9/537 (1%) Query: 405 PCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIG 464 PC +C G+RL R V + S S+ A + L+ G RA IAE KE+ Sbjct: 1243 PCEACGGSRLAPIPRAVRLAGERYHQASGRSVAAAAAWARGLQFTGDRALIAEAPHKELC 1302 Query: 465 DRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDN 524 RL F+ VGL YLTL R A TLSGGE QR+RLA+Q+G+GL G +YVLDEP+IGLH RD Sbjct: 1303 RRLDFVCEVGLGYLTLDRRAATLSGGEMQRLRLAAQLGSGLTGALYVLDEPTIGLHPRDT 1362 Query: 525 ERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVP 584 +RLLG L L +G+TV++VEHD D IRAADH+ID+GP G GG +VA GP A++A P Sbjct: 1363 DRLLGNLRRLAGMGSTVLMVEHDADTIRAADHLIDLGPSGGRKGGRIVAAGPSRAVLANP 1422 Query: 585 ESLTGQYMSGKRKIEVPKKRVPANP--EKVLKLTGARGNNLKDVTLTLPVGLFTCITGVS 642 +S T + ++G+ + + PA P + ++L GAR +NL+ TL +P G T + GVS Sbjct: 1423 DSPTARALAGEDALLSAR---PARPPVREHIELLGARAHNLQGDTLRIPAGRMTVVAGVS 1479 Query: 643 GSGKSTLINDTLFPIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPA 702 GSGKSTLI L+P A+R L EP P++ ++ + + + +DQSPIGRTPRS PA Sbjct: 1480 GSGKSTLIQKVLYPAARRALE-LEAPEPGPHKALRLPKSILRAVAVDQSPIGRTPRSIPA 1538 Query: 703 TYTGVFTPVRELFAGVPESRARGYTPGRFSFN-VRGGRCEACQGDGVIKVEMHFLPDIYV 761 T+ GV+ VR+L+A P+++ RGY P RFSFN GGRC AC+G GVI EM FLPD+ Sbjct: 1539 TFLGVWDEVRKLYAACPDAQVRGYGPARFSFNTASGGRCPACEGQGVIAHEMSFLPDVTT 1598 Query: 762 PCDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYI 821 PC+ C G R+ TL+++Y G ++ E+LD+T EEA E F A P + L T+ D+G+ Y+ Sbjct: 1599 PCEACGGARFEPATLDVRYLGLSVGELLDLTAEEAVEVFAAHPKIRAPLSTMCDLGVGYL 1658 Query: 822 RLGQSATTLSGGEAQRVKLARELSKRGTGQ-TLYILDEPTTGLHFADIQQLLDVLHKLRD 880 +GQ + TLSGGEAQR+KLA EL+ + TLY+LDEPTTGLH AD+ +L+ VL +L + Sbjct: 1659 HIGQGSHTLSGGEAQRLKLAAELTAGARPKPTLYVLDEPTTGLHLADVTRLVRVLDRLVE 1718 Query: 881 QGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLK 937 +G+T+V+IEH+ VI AD +V+LGPEGG+GGG I+ GTP VA + + T LK Sbjct: 1719 RGDTLVIIEHHPAVIACADHVVELGPEGGAGGGRIVAEGTPREVAR-QPTATGEVLK 1774 Score = 240 bits (613), Expect = 2e-61, Method: Compositional matrix adjust. Identities = 126/296 (42%), Positives = 182/296 (61%), Gaps = 9/296 (3%) Query: 3 KIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYAR 62 +IEV GAR HNL ++ VIP +++V+TG SGSGKS+LAFD ++AEGQRR++E+L+ YAR Sbjct: 957 RIEVEGAREHNLAEVSTVIPHGEIVVITGPSGSGKSTLAFDVVFAEGQRRFLETLTPYAR 1016 Query: 63 QFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCPD 122 QFL + +PDVD + G+ P+I++EQ++T STV T+TEI YLRLL+A+VGE RCPD Sbjct: 1017 QFLPTLPRPDVDRVTGVPPSIALEQRTTRSGANSTVATVTEIAHYLRLLYAKVGEARCPD 1076 Query: 123 HDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARIDGE 182 DVP+ A++ + +++S G R LLAP + RKG + A G RA DGE Sbjct: 1077 CDVPIEARSPDDVYRSLVST-RGAR-TLLAPAVVARKGTYLDVFTAAARAGITRALADGE 1134 Query: 183 VCDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVADMDDPKA 242 C PP+L+ +++H+I++V+ ++ D L + L F+ AL G + + Sbjct: 1135 PCATDSPPRLDKRREHSIDLVMYEGRM-DGLDRAL---FDRALAFGRG---AIKLVGGRG 1187 Query: 243 EELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNP 298 E L S CP CG + EL+PR FSFN G C +C+G G + D +P Sbjct: 1188 GEQLLSTTRTCPRCGVGVPELDPRWFSFNTKQGRCASCEGTGASDFDDDALATPDP 1243 Score = 151 bits (382), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 120/346 (34%), Positives = 163/346 (47%), Gaps = 43/346 (12%) Query: 406 CASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGD 465 C +C+G R R E V ++ + + D+SI A E F GQ A I Sbjct: 742 CPTCKGKRFRDEVLEVKLDGRSVADVLDLSIDEAFEVF-----VGQPA---------IRR 787 Query: 466 RLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNE 525 L L +GL YLTL + TLSGGEAQR+++A +G G +++LDEPS GLH + Sbjct: 788 ALAPLKQLGLGYLTLGQPLSTLSGGEAQRLKIARALGEPCAGALFLLDEPSAGLHPEEVT 847 Query: 526 RLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAI----- 580 L L L G +VIVV+HD D I AAD V+D+GPGAG GG VVAEG E + Sbjct: 848 HLNAALSVLVAEGASVIVVDHDLDVIAAADWVVDLGPGAGSEGGSVVAEGTPEEVARTAT 907 Query: 581 ---MAVPESLTGQYMSGKRK----------IEVPKKRVPANPEKVL-----KLTGARGNN 622 +++ E + G R+ P KR A L ++ GAR +N Sbjct: 908 RTGVSLAEWFAQRGDGGARRPRRGSAAAPAAPKPGKRGGAAARASLDRGRIEVEGAREHN 967 Query: 623 LKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQL------NGATIAEPAPYRDI 676 L +V+ +P G ITG SGSGKSTL D +F QR+ P D+ Sbjct: 968 LAEVSTVIPHGEIVVITGPSGSGKSTLAFDVVFAEGQRRFLETLTPYARQFLPTLPRPDV 1027 Query: 677 QGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESR 722 + I ++Q S AT T + +R L+A V E+R Sbjct: 1028 DRVTGVPPSIALEQRTTRSGANSTVATVTEIAHYLRLLYAKVGEAR 1073 Score = 139 bits (351), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 89/236 (37%), Positives = 122/236 (51%), Gaps = 25/236 (10%) Query: 717 GVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFL--PDIYVPCDQCKGKRYNRE 774 GVPE P FSFN + GRC +C+G G + L PD PC+ C G R Sbjct: 1204 GVPE-----LDPRWFSFNTKQGRCASCEGTGASDFDDDALATPD---PCEACGGSRLAPI 1255 Query: 775 TLEIKYKGKTIHEVLDMTIEEA------------REFFDAVP--ALARKLQTLMDVGLTY 820 ++ G+ H+ ++ A R P L R+L + +VGL Y Sbjct: 1256 PRAVRLAGERYHQASGRSVAAAAAWARGLQFTGDRALIAEAPHKELCRRLDFVCEVGLGY 1315 Query: 821 IRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRD 880 + L + A TLSGGE QR++LA +L TG LY+LDEPT GLH D +LL L +L Sbjct: 1316 LTLDRRAATLSGGEMQRLRLAAQLGSGLTG-ALYVLDEPTIGLHPRDTDRLLGNLRRLAG 1374 Query: 881 QGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFL 936 G+T++++EH+ D I+ AD ++DLGP GG GG I+ +G V S TAR L Sbjct: 1375 MGSTVLMVEHDADTIRAADHLIDLGPSGGRKGGRIVAAGPSRAVLANPDSPTARAL 1430 Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 41/125 (32%), Positives = 61/125 (48%), Gaps = 14/125 (11%) Query: 2 DKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRY-VESLSAY 60 + IE+ GAR HNL+ L IP ++ VV G+SGSGKS+L LY +R +E+ Sbjct: 1448 EHIELLGARAHNLQGDTLRIPAGRMTVVAGVSGSGKSTLIQKVLYPAARRALELEAPEPG 1507 Query: 61 ARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRC 120 + L L + + A++++Q PRS T + D +R L+A C Sbjct: 1508 PHKALRLPKS--------ILRAVAVDQSPIGRTPRSIPATFLGVWDEVRKLYA-----AC 1554 Query: 121 PDHDV 125 PD V Sbjct: 1555 PDAQV 1559 >UniRef50_B5JNR8 Excinuclease ABC, A subunit, putative n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JNR8_9BACT Length = 1476 Score = 632 bits (1630), Expect = e-179, Method: Compositional matrix adjust. Identities = 384/1026 (37%), Positives = 562/1026 (54%), Gaps = 109/1026 (10%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 63 I +RG R +NLKNI++ IP K I VTGLSG+GKSSL FDTL+AEGQRRYVE+ SAY RQ Sbjct: 12 IRLRGVRQNNLKNIDVDIPLGKFIAVTGLSGAGKSSLVFDTLHAEGQRRYVETFSAYTRQ 71 Query: 64 FLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCPDH 123 FL L+EKPD+D E + P+I+IEQK+T RSTVGT+TE+ D+ ++ F+ V P Sbjct: 72 FLDLLEKPDLDSAENVRPSIAIEQKNTIKTSRSTVGTMTELTDFFKVWFSHVAALYDPVT 131 Query: 124 DVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARIDGEV 183 + + + L+ + + L + K K + L+N+ +QGY +R+ Sbjct: 132 NEQIHDDNPITIWQKSLATYSKQTVTLAFQVTKPEKLTWPEILKNIKAQGY--SRLYQTT 189 Query: 184 CDLSDPPKLE------------LQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGT 231 + P+L T+ VV DR ++ + R E+ ETALE G Sbjct: 190 PKSASAPQLHRIETISEDSCNSWADNTTLHVVQDRIQLFNTNRSRFLEAAETALEFGQGQ 249 Query: 232 AVVADMD-DPKAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFD 290 ++ D + D A S P G + R P LFSFN+P GACP C G G D Sbjct: 250 LLLLDKNGDTLARH---SRGLHSPTSGKTYRPASPPLFSFNSPIGACPKCRGFGRVIEID 306 Query: 291 PDRVIQNPELSLAGGAIRGWDRRNFYYFQM-LKSLADHYKFDVEAPWGSLSANVHKVVLY 349 I + S+A G I+ ++ + + + L K P+ L+ V+ Sbjct: 307 YRLAIPDTNKSIADGLIKPFEGQVYGESKNDLVRACKRLKIFTTKPFNKLTQRQQDNVIL 366 Query: 350 GSGKENIEFKYMNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASC 409 G ++ + ++ + +G +ER T VR L+++ + C C Sbjct: 367 GEPA----YRKLPPGSESDGLWYGVKGFFDWLER---NTYKMHVRIFLSRYRAYVKCPDC 419 Query: 410 EGTRLRREARHVYVENTPLPAISDMSIG---HAMEFFNNLKLAGQRAKIAEKILKEIGD- 465 +GTRL+ ++ + LP + + + H +E A Q K I ++ D Sbjct: 420 QGTRLQPDSLCWKWQGYRLPDLYQLPVDQLLHLIESSQPKTQAPQTQKARNPIREDSSDS 479 Query: 466 ---------------------------------RLKFLVNVGLNYLTLSRSAETLSGGEA 492 RL++L +VGL YLTL+RSA TLSGGE Sbjct: 480 WAKNPLPSGATLEEFRDETPNHQATIASDAILSRLRYLDHVGLGYLTLNRSARTLSGGEV 539 Query: 493 QRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIR 552 +R+ L S +GA LV ++VLDEPS+GLH RD +RL+ + L D GNTV++VEHD+ IR Sbjct: 540 ERVNLTSCLGASLVDTLFVLDEPSVGLHARDIDRLIHIVRTLTDAGNTVVLVEHDDAMIR 599 Query: 553 AADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEVP----------- 601 AADHVI+IGP G GG +V +G ++ +S+TGQY+SGK++I VP Sbjct: 600 AADHVIEIGPQPGAAGGHLVFQGTQAQLLKSRKSITGQYLSGKKQIPVPTQTRSVGSDLV 659 Query: 602 ----------KKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLIN 651 + R + E L +T A +N++D++L++P+ F C++GVSGSGKSTL+N Sbjct: 660 SRSTSTSSKARTRHSSKSEGGLHITSASKHNIQDLSLSIPLQRFVCLSGVSGSGKSTLLN 719 Query: 652 DTLFP--IAQRQLNGATIAE-PAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVF 708 L+ IAQR L IAE PA + F+++ +DQSP+ RTPRSNP + + Sbjct: 720 AVLYQNLIAQRGL----IAEDPASVASLTTDLPFEEITLVDQSPVSRTPRSNPVVFVEAW 775 Query: 709 TPVRELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKG 768 +R L+ +P+S GYT FSFN GRCE C+G G K+EM FL D+YVPC C G Sbjct: 776 DHIRTLYGKLPQSVENGYTASSFSFNAGDGRCEPCKGLGYEKIEMQFLSDVYVPCPHCDG 835 Query: 769 KRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSAT 828 KR+ E LEI ++G I ++LD+TI++ + F+A P + KL L +VGL Y++ GQ Sbjct: 836 KRFKSELLEITHEGYNISQLLDLTIDQLLKLFEAYPKIHSKLAALEEVGLGYLKSGQPLN 895 Query: 829 TLSGGEAQRVKLARELS----------------KRGTGQTLYILDEPTTGLHFADIQQLL 872 TLSGGE+QR+KL + LS + TG +L +LDEPTTGLH D+++LL Sbjct: 896 TLSGGESQRLKLVKYLSSSTRVNDSTHHSPLTTQNSTG-SLILLDEPTTGLHKHDVRRLL 954 Query: 873 DVLHKLRDQGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHT 932 VL K+ D G++++VIEHN+DV+K+ADW++++GPE G+ GG+++ GTPET A+ + T Sbjct: 955 TVLQKIVDSGHSLIVIEHNIDVLKSADWLIEMGPEAGAKGGQVVFQGTPETCAQT-TTET 1013 Query: 933 ARFLKP 938 A++L+P Sbjct: 1014 AKYLQP 1019 Score = 196 bits (498), Expect = 4e-48, Method: Compositional matrix adjust. Identities = 108/247 (43%), Positives = 153/247 (61%), Gaps = 13/247 (5%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 63 + V GAR HNLKNI + IP + VVTG SGSGKS+LAFD ++ EGQRR++ES+S YARQ Sbjct: 1068 LTVTGARHHNLKNITVSIPHYEFTVVTGASGSGKSTLAFDIVFGEGQRRFMESMSPYARQ 1127 Query: 64 FLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCPDH 123 F+ + +PD+D + G+ P ++IEQ+ T + +STV TITE+ YLRLL++R+G P PD Sbjct: 1128 FVEQLPRPDLDQLTGIQPTVAIEQRVTRGSRKSTVATITEVAQYLRLLYSRLGIPHNPDS 1187 Query: 124 DVPLAAQT---VSQMVDNVLSQPEGKR---LMLLAPIIKERKGEHTKTLENLASQGYIRA 177 PL +QT + + + +++ PE K+ L LLAP+I+ RKG H +A GY Sbjct: 1188 GAPLISQTETEIQKRLQKIITSPEAKKAKHLFLLAPLIRNRKGHHQPIANWIADHGYEMM 1247 Query: 178 RIDGEVCDLSDPPKLELQKKHTIEVVVDRFKV-----RDDLTQRLAESFETALELSGGTA 232 R+DG++ D KL+ K+H IEVV+ K R + Q + + AL GTA Sbjct: 1248 RVDGKLIFTDDFKKLDRYKEHNIEVVIADLKPLTGSGRSPIGQ-INRHLKEALHRGKGTA 1306 Query: 233 VVADMDD 239 +V DD Sbjct: 1307 LVV-FDD 1312 Score = 144 bits (364), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 110/375 (29%), Positives = 171/375 (45%), Gaps = 69/375 (18%) Query: 405 PCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIG 464 PC C+G R + E + E + + D++I ++ F + +I Sbjct: 829 PCPHCDGKRFKSELLEITHEGYNISQLLDLTIDQLLKLF--------------EAYPKIH 874 Query: 465 DRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGL----------------VGV 508 +L L VGL YL + TLSGGE+QR++L + + G Sbjct: 875 SKLAALEEVGLGYLKSGQPLNTLSGGESQRLKLVKYLSSSTRVNDSTHHSPLTTQNSTGS 934 Query: 509 MYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHG 568 + +LDEP+ GLH+ D RLL L + D G+++IV+EH+ D +++AD +I++GP AG G Sbjct: 935 LILLDEPTTGLHKHDVRRLLTVLQKIVDSGHSLIVIEHNIDVLKSADWLIEMGPEAGAKG 994 Query: 569 GEVVAEGPLEAIMAVPESLTGQYMS---------GKRKIEVPKKRV-------------P 606 G+VV +G E A + T +Y+ K E+P + P Sbjct: 995 GQVVFQGTPETC-AQTTTETAKYLQPEFDSRTQISNLKSEIPNPTLLAAEAKSSYNSNSP 1053 Query: 607 ANPEK--------VLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIA 658 P L +TGAR +NLK++T+++P FT +TG SGSGKSTL D +F Sbjct: 1054 LTPHSSPLDGQSSALTVTGARHHNLKNITVSIPHYEFTVVTGASGSGKSTLAFDIVFGEG 1113 Query: 659 QRQL------NGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVR 712 QR+ E P D+ L + I+Q + +S AT T V +R Sbjct: 1114 QRRFMESMSPYARQFVEQLPRPDLDQLTGIQPTVAIEQRVTRGSRKSTVATITEVAQYLR 1173 Query: 713 ELFA--GVPESRARG 725 L++ G+P + G Sbjct: 1174 LLYSRLGIPHNPDSG 1188 Score = 55.8 bits (133), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 37/118 (31%), Positives = 59/118 (50%), Gaps = 6/118 (5%) Query: 607 ANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGAT 666 +N ++L G R NNLK++ + +P+G F +TG+SG+GKS+L+ DTL QR+ Sbjct: 6 SNKPTAIRLRGVRQNNLKNIDVDIPLGKFIAVTGLSGAGKSSLVFDTLHAEGQRRYVETF 65 Query: 667 IAEPAPY------RDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGV 718 A + D+ E+ I I+Q +T RS T T + + F+ V Sbjct: 66 SAYTRQFLDLLEKPDLDSAENVRPSIAIEQKNTIKTSRSTVGTMTELTDFFKVWFSHV 123 >UniRef50_B9XQK9 Excinuclease ABC, A subunit n=3 Tax=Bacteria RepID=B9XQK9_9BACT Length = 1048 Score = 631 bits (1628), Expect = e-179, Method: Compositional matrix adjust. Identities = 407/1058 (38%), Positives = 552/1058 (52%), Gaps = 148/1058 (13%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 63 I +RG R +NLKN +L +P+++LIV+TGLSGSGKSSLAFDTL+AEGQRRY+E+ S YARQ Sbjct: 12 IRLRGVRHNNLKNFDLDLPQNQLIVITGLSGSGKSSLAFDTLFAEGQRRYIETFSPYARQ 71 Query: 64 FLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCPDH 123 F M+KP VD IEG+ PAI+IEQ+++ RSTVGT+TE+ DY++LL+ V + C Sbjct: 72 FFDRMDKPQVDSIEGIPPAIAIEQRNSVKTTRSTVGTMTELCDYMKLLWPHVSQLYCRQC 131 Query: 124 DVPLAAQTVSQMVDNVLSQPEGKR---------LMLLAPIIKERKGEHTKTLENLASQGY 174 P+ + Q + LS + R L+ A I E K ++L ++ QGY Sbjct: 132 HQPVR-KDPPQRIWETLSAEQKTRDNGAKVDEVLVTFALPISE-KLSLDESLALISKQGY 189 Query: 175 IRARIDGEVCDLSDPPKLELQ-KKHTIEVVVDRFKVRDDLTQRLAESFETALELSGG--- 230 R ++ +V L + L + K T+ V+ DR K+ + R E+ E A G Sbjct: 190 QRLLVNNKVVRLEEATDLLRRVKPETVTVIQDRVKIARENRARFVEACEQAYHFGKGKLS 249 Query: 231 ----TAVVADMDDPKAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQ 286 TA D FS C C +E LFSFN+P GACPTC G G Sbjct: 250 LHYVTAESTDTQHAIRHIRPFSNKLHCATCDIDYKESSTALFSFNHPIGACPTCRGFGRT 309 Query: 287 QYFDPDRVIQNPELSLAGGAIRGWDRRNFYYFQMLKSLADHYKF------DVEAPWGSLS 340 D D + + +LA GA++ W Q +S AD KF + + L Sbjct: 310 ITIDYDLALPDKTKTLAEGAVKPWQTG-----QGAESQADLMKFCRTRRVPTDVRFKDLP 364 Query: 341 ANVHKVVLYGSGKENIEFKYMNDRGDTSIRRHPFEGVLHNMERRYKETESSA----VREE 396 A V+ G D G S+ H + + ++ ++ ES A VR Sbjct: 365 AGFQDWVINGD----------KDYGKDSM--HEWPRAWYGIKGYFRWLESKAYKMHVRVL 412 Query: 397 LAKFISNRPCASCEGTRLRREARHVYVE------NTPLPAISDMSIGHAMEFFNNLKLAG 450 L+++ S C C G R + E V+ N P S S+ +F+ L L Sbjct: 413 LSRYRSYVLCPDCHGQRFQAETLLYKVQSKFSPRNAPSNGSSQTSLITLSDFYR-LPLRD 471 Query: 451 QRAKIAEK--------------ILKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIR 496 A I E I E+ RL +L NVGL YLTL R +LSGGE +R+ Sbjct: 472 ALAFIEELSTRHNVKPSSPLGLIFNEVRARLGYLNNVGLGYLTLDRPTRSLSGGETERVN 531 Query: 497 LASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADH 556 L + +G LV ++VLDEPS+GLH RD RL+ L LR+ GNTV+VVEH+ +RAAD Sbjct: 532 LTTCLGTRLVNTLFVLDEPSVGLHPRDTGRLVNILEQLRNAGNTVVVVEHEASVMRAADQ 591 Query: 557 VIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEVPKKR------------ 604 +IDIGPG G GG+VV +G I+ P SLTGQY+SG R I +P++R Sbjct: 592 IIDIGPGHGATGGQVVFQGSYTDILKSPVSLTGQYLSGTRDIPLPQRRHVRLETKGAKPT 651 Query: 605 ------VPANPEKV--LKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLIND---- 652 A P K L L A +NL+D+T+ +P+ F CITGVSGSGK+TL + Sbjct: 652 RNGRGQAAAEPAKTSFLTLAHAIQHNLQDLTVRIPLERFVCITGVSGSGKTTLAREVLLP 711 Query: 653 ---------------------TLFPIAQRQL-NGATIAEPAPYRDIQGLEHFDKVIDIDQ 690 T QL NG T + G E +V+ +DQ Sbjct: 712 LLSSSLNEPESSPSESEDNEETEHATRNTQLGNGHTPT-------LTGSESLGRVVLVDQ 764 Query: 691 SPIGRTPRSNPATYTGVFTPVRELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIK 750 S +G+TPRSNPA Y G F +R++FA +R RG FSFN G+CE C+G G K Sbjct: 765 SILGKTPRSNPAVYIGAFDDIRDVFAQSELARQRGLNSSAFSFNSGQGQCERCRGAGFEK 824 Query: 751 VEMHFLPDIYVPCDQCKGKRYNRETLEIKY----------------KGKTIHEVLDMTIE 794 +EM FL D+++ C +C G+RY LEIK + +I ++LD T++ Sbjct: 825 IEMQFLSDVFIKCPECNGRRYRPHILEIKVQPPLVSSNAANADSRSREMSIADLLDATVD 884 Query: 795 EAREFFD------AVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLAREL---- 844 EA +F A A+ L+ L DVGL Y+R+GQ TLSGGE+QR+KL R L Sbjct: 885 EAVDFLSQFLDSKAASRAAQSLKLLQDVGLGYLRVGQPINTLSGGESQRLKLVRHLAEFS 944 Query: 845 --SKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADWIV 902 S T TL++ DEPTTGLHF D++ LL V +L D +++V+IEHNLDVIK+ADW++ Sbjct: 945 HSSAGDTKPTLFLFDEPTTGLHFDDVRVLLKVFQRLVDARHSVVIIEHNLDVIKSADWVI 1004 Query: 903 DLGPEGGSGGGEILVSGTPETVAECEASHTARFLKPML 940 DLGP+ G GGEI+ GTPE VA C SHT + LK L Sbjct: 1005 DLGPDAGDRGGEIVAEGTPEEVAACAKSHTGQALKAEL 1042 Score = 106 bits (264), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 70/219 (31%), Positives = 104/219 (47%), Gaps = 31/219 (14%) Query: 406 CASCEGTRLRREARHVYVE----------------NTPLPAISDMSIGHAMEFFNNLKLA 449 C C G R R + V+ + + D ++ A++F + Sbjct: 837 CPECNGRRYRPHILEIKVQPPLVSSNAANADSRSREMSIADLLDATVDEAVDFLSQF--- 893 Query: 450 GQRAKIAEKILKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLA------SQIGA 503 + K LK L +VGL YL + + TLSGGE+QR++L S A Sbjct: 894 -----LDSKAASRAAQSLKLLQDVGLGYLRVGQPINTLSGGESQRLKLVRHLAEFSHSSA 948 Query: 504 GLVG-VMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGP 562 G +++ DEP+ GLH D LL L D ++V+++EH+ D I++AD VID+GP Sbjct: 949 GDTKPTLFLFDEPTTGLHFDDVRVLLKVFQRLVDARHSVVIIEHNLDVIKSADWVIDLGP 1008 Query: 563 GAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEVP 601 AG GGE+VAEG E + A +S TGQ + + E P Sbjct: 1009 DAGDRGGEIVAEGTPEEVAACAKSHTGQALKAELAGEHP 1047 Score = 55.8 bits (133), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 42/123 (34%), Positives = 58/123 (47%), Gaps = 14/123 (11%) Query: 612 VLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAEPA 671 V++L G R NNLK+ L LP ITG+SGSGKS+L DTLF QR+ I + Sbjct: 11 VIRLRGVRHNNLKNFDLDLPQNQLIVITGLSGSGKSSLAFDTLFAEGQRRY----IETFS 66 Query: 672 PYR----------DIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPES 721 PY + +E I I+Q +T RS T T + ++ L+ V + Sbjct: 67 PYARQFFDRMDKPQVDSIEGIPPAIAIEQRNSVKTTRSTVGTMTELCDYMKLLWPHVSQL 126 Query: 722 RAR 724 R Sbjct: 127 YCR 129 >UniRef50_Q21RT9 UvrA family protein n=4 Tax=Bacteria RepID=Q21RT9_RHOFD Length = 2098 Score = 626 bits (1615), Expect = e-177, Method: Compositional matrix adjust. Identities = 400/1056 (37%), Positives = 563/1056 (53%), Gaps = 147/1056 (13%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 63 I +RGAR HNLKN++L I +L VVTG SGSGKSSL FDTL+AEGQRRYVE+ SAYARQ Sbjct: 6 IRIRGARQHNLKNLDLDIRTGELTVVTGPSGSGKSSLVFDTLFAEGQRRYVETFSAYARQ 65 Query: 64 FLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGE------ 117 FL M+KP VD +EG+ PAI+I+Q + + RSTVGT+TE++D+L+LLFAR G Sbjct: 66 FLDRMDKPAVDKVEGVPPAIAIDQTNPVRSSRSTVGTMTELNDHLKLLFARAGALFDRVT 125 Query: 118 PRCPDHDVPLAAQTV-SQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIR 176 + HD P +T+ +Q+++ S RL + P+ + + L+ G+ + Sbjct: 126 AQPVRHDSP---ETIYAQLLER--SAQANTRLAITFPVELPASATPEEVAQWLSVSGFTK 180 Query: 177 ARIDGEVCDLSDPPKLELQK-----------KHTIEVVVDRFKVRDDLTQRLAESFETAL 225 + + ++ ++ P + +K + ++VV DRF++ R+ E+ E AL Sbjct: 181 VQAERDL-EVEASPAVGHKKPGKAAPEPASRRKVLDVVADRFRLAHAERARVLEAIEVAL 239 Query: 226 ELSGGTAVVADMDDPKAEELL-----------------FSANFACPICGYSMRELEPRLF 268 + G V +++P+A ++ FS CP + +F Sbjct: 240 KHGSGRINVYVLNEPQAPDIQGSLATDSIVNSVPEIWRFSTGLHCPESNLRYTDPIASMF 299 Query: 269 SFNNPAGACPTCDGLGVQQYFDPDRVIQNPELSLAGGAIRGWDRRNFYYFQM-LKSLADH 327 SFN+ GAC C G G D VI N +L+L GAI+ + Q L A+ Sbjct: 300 SFNSAVGACDACRGFGRVIGVDYGLVIPNDKLTLRAGAIKPMQTPAWQEAQDDLMRHAEG 359 Query: 328 YKFDVEAPWGSLSANVHKVVLYGSGKENIEFKYMNDRGDTSIRRHPFEGVLHNMERRYKE 387 + PW L+ V+ GS N ++ +H F G+ E Y E Sbjct: 360 AGIPRDTPWYKLTPEQQHWVIDGSPNWNGKWN-----------QHWF-GIRRFFE--YLE 405 Query: 388 TESSA--VREELAKFISNRPCASCEGTR------LRREARHVYVENTPLPAISDMSIG-- 437 T+S +R L+K+ S PC +C G R L R + PA M G Sbjct: 406 TKSYKMHIRVLLSKYRSYTPCPTCGGARLKTESLLWRMGSKADADKVLDPAKRFMPAGVK 465 Query: 438 -----------------------HAMEFFNNLK------------LAGQ----------- 451 FF++++ AG+ Sbjct: 466 WSREQLEALPGLCLHDLMLLPLDRVRRFFDSMQARLGVSERAAPETAGEPGLSVAVVTSE 525 Query: 452 -RAKIAEKILKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMY 510 AK + + +EI RLK+L VG+ YLTL R + TLSGGE QRI L + +G LV ++ Sbjct: 526 ADAKTLKLLFEEISTRLKYLCEVGIGYLTLDRQSRTLSGGEVQRINLTTALGTSLVNTLF 585 Query: 511 VLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGE 570 VLDEPSIGLH RD R++ + LRD GNT++VVEHD + AAD +ID+GPG G GG+ Sbjct: 586 VLDEPSIGLHPRDMHRIIVAMQRLRDAGNTLVVVEHDPAVMLAADRMIDMGPGPGERGGQ 645 Query: 571 VVAEGPLEAIMAVPESLTGQYMSGKRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTL 630 +V +G A + ++LTG Y+ G++++ + +R+ A L L GAR +NLK+V + Sbjct: 646 IVFDGS-TADLRHADTLTGAYLGGRKQVGLGFQRLVAANTPRLILEGAREHNLKNVGVEF 704 Query: 631 PVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQ 690 P+ CITGVSGSGKSTLI D L P +R G P + + G E V+ +DQ Sbjct: 705 PLQRLVCITGVSGSGKSTLIQDILAPALKRHF-GKPSEAPGAFERLLGAEQLSDVVFVDQ 763 Query: 691 SPIGRTPRSNPATYTGVFTPVRELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIK 750 SPIG+T RSNP +Y G + +RE+FA P SR RGYT +FSFN GRC C G G Sbjct: 764 SPIGKTARSNPVSYVGAWDAIREIFANAPLSRQRGYTASKFSFNNGDGRCATCGGSGFEH 823 Query: 751 VEMHFLPDIYVPCDQCKGKRYNRETLE--------IKYKGK-------TIHEVLDMTIEE 795 VEM FL D+Y+ C C GKRY E LE IK G + +VL++T+ E Sbjct: 824 VEMQFLSDVYLRCPDCDGKRYRPEILEITIERPLRIKSAGPAPSVRHINVADVLNLTVSE 883 Query: 796 AREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLA-------------- 841 A F+ + R LQ ++DVGL Y++LGQ TLSGGEAQR+KLA Sbjct: 884 AAMLFEHDREVIRGLQPIIDVGLEYVKLGQPVPTLSGGEAQRLKLAGFLADAAKSASASR 943 Query: 842 RELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADWI 901 + +++RG TL++ DEPTTGLHF DI +L+ L KL D G++++VIEHNLDVI+ +DW+ Sbjct: 944 QAIARRG---TLFMFDEPTTGLHFDDIAKLMRALRKLLDVGHSLIVIEHNLDVIRASDWL 1000 Query: 902 VDLGPEGGSGGGEILVSGTPETVAECEASHTARFLK 937 +DLGPEGG GGE++ GTP+ V + ASHT + L+ Sbjct: 1001 IDLGPEGGDAGGEVVAFGTPDDVRQHPASHTGKALR 1036 Score = 320 bits (820), Expect = 2e-85, Method: Compositional matrix adjust. Identities = 162/336 (48%), Positives = 220/336 (65%), Gaps = 21/336 (6%) Query: 610 EKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFP-----IAQRQLNG 664 ++ L +T A +NL+ VT +P+ ITGVSGSGKSTL D L + +R Sbjct: 1746 QRWLTVTNATMHNLQHVTAQVPLSRLVAITGVSGSGKSTLARDVLLANVHTAVQKRSTKA 1805 Query: 665 ATIAEPAPYR-------DIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAG 717 A A + + G E D+V+++DQ+PIG+TPRS PATY G + +R+LFA Sbjct: 1806 GRDALDAGEQISWTGCTSVTGFESVDRVLEVDQTPIGKTPRSCPATYIGFWDIIRKLFAD 1865 Query: 718 VPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLE 777 E++ARGY RFSFN GRC C+G G+ + M FLPD+ V C+ CKG R+N ETL Sbjct: 1866 TLEAKARGYAANRFSFNTGEGRCAGCEGQGIRTIAMSFLPDVKVLCETCKGARFNPETLA 1925 Query: 778 IKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQR 837 + ++GK I +VL M ++EA +FF A+P ++ LQ L DVGL Y+ LGQ + TLSGGEAQR Sbjct: 1926 VTWRGKNIGDVLQMEVDEAVQFFAAMPNISHPLQLLKDVGLGYLTLGQPSPTLSGGEAQR 1985 Query: 838 VKLARELSK-------RG--TGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVI 888 +KL ELSK RG TLY+LDEPT GLH AD+++L+ VLH+L D G+++VVI Sbjct: 1986 LKLVTELSKVRDDITRRGQKAPHTLYVLDEPTVGLHMADVEKLIKVLHRLVDGGHSVVVI 2045 Query: 889 EHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETV 924 EH+LDVI ADW++DLGP+GG+ GG ++ + TPE V Sbjct: 2046 EHDLDVIAEADWVIDLGPDGGNAGGRVVAATTPEGV 2081 Score = 207 bits (528), Expect = 1e-51, Method: Compositional matrix adjust. Identities = 117/315 (37%), Positives = 179/315 (56%), Gaps = 20/315 (6%) Query: 2 DKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYA 61 + I++ AR HNLK++++ IPR K VVTG+SGSGKS+LAFD L+ EGQRRY+ESL+AYA Sbjct: 1093 NAIQIINAREHNLKSLSVNIPRGKFTVVTGVSGSGKSTLAFDILFNEGQRRYLESLNAYA 1152 Query: 62 RQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCP 121 R + +P+VD + G+ P ++IEQ+ + +STVGT TE+ +LRLLF ++G C Sbjct: 1153 RSIVQPAGRPEVDAVYGIPPTVAIEQRLSRGGRKSTVGTTTEVWHFLRLLFVKLGTQHCI 1212 Query: 122 DHDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARIDG 181 P+A QT + ++ G+ + LL+P++ RKG +T+ + +G+ R+DG Sbjct: 1213 HDGTPVAPQTPDSIAAQLMKNFRGQHIGLLSPLVMNRKGVYTELADWARPRGFTHLRVDG 1272 Query: 182 EVCDLSDPPKLELQKKHTIEVVVDRFKVR-DDLTQRLAESFETALELSGGTAVVADMDDP 240 + P+++ K+HTIE+ V V + A + + G V++++ Sbjct: 1273 NFLPTTAFPRIDRFKEHTIELPVASLDVLPEQEAALRAALAQALMHGKGVVHVLSNLSGL 1332 Query: 241 KAEEL------------LFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGV--- 285 +A L FS ACP+C S EL+PRLFS+N+ G CP C G GV Sbjct: 1333 RAAMLAGTPTAQIGTLQAFSTLRACPVCSTSYAELDPRLFSYNSKHGWCPDCVGTGVRLT 1392 Query: 286 ---QQYFDPDRVIQN 297 ++ FD D V+ N Sbjct: 1393 KEQRKVFD-DSVVDN 1406 Score = 186 bits (471), Expect = 5e-45, Method: Compositional matrix adjust. Identities = 101/209 (48%), Positives = 131/209 (62%), Gaps = 22/209 (10%) Query: 406 CASCEGTRLRREARHV------------------YVENTPLPAISDMSIGHAMEFFNNLK 447 C +C+GTRL AR V +E + ++ +S+ ++ L+ Sbjct: 1428 CPACQGTRLNATARAVKFGLQLASPATASIRARQAIEGVAITELARLSVTDLRQWVETLQ 1487 Query: 448 LAGQRAK----IAEKILKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGA 503 G+ ++ IA ++ EI RL+FL VGL YLTL R A TLSGGEAQRIRLA+Q+G+ Sbjct: 1488 TQGRMSQRETDIARDLVPEIKGRLEFLEQVGLGYLTLDRGAPTLSGGEAQRIRLAAQLGS 1547 Query: 504 GLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPG 563 L GV YVLDEP+IGLH RDN+ LLG L L D GNT++VVEHDED IR ADH+IDIGP Sbjct: 1548 NLQGVCYVLDEPTIGLHPRDNQILLGALQSLSDQGNTLVVVEHDEDTIRYADHIIDIGPS 1607 Query: 564 AGVHGGEVVAEGPLEAIMAVPESLTGQYM 592 AG GG++VAEG + I ES TG+Y+ Sbjct: 1608 AGKRGGQLVAEGSVADIQGAAESQTGRYL 1636 Score = 139 bits (351), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 113/374 (30%), Positives = 176/374 (47%), Gaps = 70/374 (18%) Query: 406 CASCEGTRLRREARHVYVENT-------PLPAISDMSIGHAMEFFNNLKLAGQRAKIAEK 458 C C+G R R E + +E P P++ +++ + L L A + + Sbjct: 836 CPDCDGKRYRPEILEITIERPLRIKSAGPAPSVRHINVA------DVLNLTVSEAAMLFE 889 Query: 459 ILKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLV------------ 506 +E+ L+ +++VGL Y+ L + TLSGGEAQR++LA + Sbjct: 890 HDREVIRGLQPIIDVGLEYVKLGQPVPTLSGGEAQRLKLAGFLADAAKSASASRQAIARR 949 Query: 507 GVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGV 566 G +++ DEP+ GLH D +L+ L L D+G+++IV+EH+ D IRA+D +ID+GP G Sbjct: 950 GTLFMFDEPTTGLHFDDIAKLMRALRKLLDVGHSLIVIEHNLDVIRASDWLIDLGPEGGD 1009 Query: 567 HGGEVVAEGPLEAIMAVPESLTGQYM----------SGKRKIEVP--------------- 601 GGEVVA G + + P S TG+ + G + P Sbjct: 1010 AGGEVVAFGTPDDVRQHPASHTGKALRDYATAMGGVHGVNEFTAPYLVHATAAGVTPGAS 1069 Query: 602 ---KKRVP-ANP----------EKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKS 647 +P A P E +++ AR +NLK +++ +P G FT +TGVSGSGKS Sbjct: 1070 DAGSTSLPGATPAAADHGVHAAENAIQIINAREHNLKSLSVNIPRGKFTVVTGVSGSGKS 1129 Query: 648 TLINDTLFPIAQRQ----LNGA--TIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNP 701 TL D LF QR+ LN +I +PA ++ + + I+Q +S Sbjct: 1130 TLAFDILFNEGQRRYLESLNAYARSIVQPAGRPEVDAVYGIPPTVAIEQRLSRGGRKSTV 1189 Query: 702 ATYTGVFTPVRELF 715 T T V+ +R LF Sbjct: 1190 GTTTEVWHFLRLLF 1203 Score = 129 bits (324), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 87/269 (32%), Positives = 122/269 (45%), Gaps = 61/269 (22%) Query: 728 PGRFSFNVRGGRCEACQGDGV--IKVEMHFLPDIYVP----------------------C 763 P FS+N + G C C G GV K + D V C Sbjct: 1369 PRLFSYNSKHGWCPDCVGTGVRLTKEQRKVFDDSVVDNDNKGREQTFAEPEVEDLVDAVC 1428 Query: 764 DQCKGKRYNRETLEIKY------------------KGKTIHEVLDMTIEEAREFF----- 800 C+G R N +K+ +G I E+ +++ + R++ Sbjct: 1429 PACQGTRLNATARAVKFGLQLASPATASIRARQAIEGVAITELARLSVTDLRQWVETLQT 1488 Query: 801 -------------DAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKR 847 D VP + +L+ L VGL Y+ L + A TLSGGEAQR++LA +L Sbjct: 1489 QGRMSQRETDIARDLVPEIKGRLEFLEQVGLGYLTLDRGAPTLSGGEAQRIRLAAQLGSN 1548 Query: 848 GTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADWIVDLGPE 907 G Y+LDEPT GLH D Q LL L L DQGNT+VV+EH+ D I+ AD I+D+GP Sbjct: 1549 LQG-VCYVLDEPTIGLHPRDNQILLGALQSLSDQGNTLVVVEHDEDTIRYADHIIDIGPS 1607 Query: 908 GGSGGGEILVSGTPETVAECEASHTARFL 936 G GG+++ G+ + S T R+L Sbjct: 1608 AGKRGGQLVAEGSVADIQGAAESQTGRYL 1636 Score = 115 bits (287), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 73/214 (34%), Positives = 106/214 (49%), Gaps = 26/214 (12%) Query: 382 ERRYKETESSAVREELAKFISNRP--CASCEGTRLRREARHVYVENTPLPAISDMSIGHA 439 E R E +R F+ + C +C+G R E V + + M + A Sbjct: 1885 EGRCAGCEGQGIRTIAMSFLPDVKVLCETCKGARFNPETLAVTWRGKNIGDVLQMEVDEA 1944 Query: 440 MEFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLAS 499 ++FF + I L+ L +VGL YLTL + + TLSGGEAQR++L + Sbjct: 1945 VQFF--------------AAMPNISHPLQLLKDVGLGYLTLGQPSPTLSGGEAQRLKLVT 1990 Query: 500 QI----------GAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDED 549 ++ G +YVLDEP++GLH D E+L+ L L D G++V+V+EHD D Sbjct: 1991 ELSKVRDDITRRGQKAPHTLYVLDEPTVGLHMADVEKLIKVLHRLVDGGHSVVVIEHDLD 2050 Query: 550 AIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAV 583 I AD VID+GP G GG VVA E ++ + Sbjct: 2051 VIAEADWVIDLGPDGGNAGGRVVAATTPEGVVTL 2084 Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 42/114 (36%), Positives = 61/114 (53%), Gaps = 6/114 (5%) Query: 609 PEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIA 668 P+ ++++ GAR +NLK++ L + G T +TG SGSGKS+L+ DTLF QR+ A Sbjct: 2 PQGIIRIRGARQHNLKNLDLDIRTGELTVVTGPSGSGKSSLVFDTLFAEGQRRYVETFSA 61 Query: 669 EPAPYRDIQGLEHFDKV------IDIDQSPIGRTPRSNPATYTGVFTPVRELFA 716 + D DKV I IDQ+ R+ RS T T + ++ LFA Sbjct: 62 YARQFLDRMDKPAVDKVEGVPPAIAIDQTNPVRSSRSTVGTMTELNDHLKLLFA 115 Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 35/116 (30%), Positives = 53/116 (45%), Gaps = 6/116 (5%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 63 + V A HNL+++ +P +L+ +TG+SGSGKS+LA D L A + + R Sbjct: 1749 LTVTNATMHNLQHVTAQVPLSRLVAITGVSGSGKSTLARDVLLANVHTAVQKRSTKAGRD 1808 Query: 64 FLSLMEK------PDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFA 113 L E+ V E + + ++Q PRS T D +R LFA Sbjct: 1809 ALDAGEQISWTGCTSVTGFESVDRVLEVDQTPIGKTPRSCPATYIGFWDIIRKLFA 1864 Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 40/115 (34%), Positives = 59/115 (51%), Gaps = 15/115 (13%) Query: 3 KIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYAR 62 ++ + GAR HNLKN+ + P +L+ +TG+SGSGKS+L D L A +R+ S Sbjct: 686 RLILEGAREHNLKNVGVEFPLQRLVCITGVSGSGKSTLIQDIL-APALKRHFGKPSEAPG 744 Query: 63 QFLSLMEKPDVDHIEGLSPAISIEQ----KSTSHNPRSTVGTITEIHDYLRLLFA 113 F L+ E LS + ++Q K+ NP S VG D +R +FA Sbjct: 745 AFERLLGA------EQLSDVVFVDQSPIGKTARSNPVSYVGA----WDAIREIFA 789 >UniRef50_Q0W0L7 Excinuclease ABC, ATPase subunit n=3 Tax=cellular organisms RepID=Q0W0L7_UNCMA Length = 843 Score = 626 bits (1614), Expect = e-177, Method: Compositional matrix adjust. Identities = 339/711 (47%), Positives = 460/711 (64%), Gaps = 14/711 (1%) Query: 236 DMDDPKAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVI 295 D D A+E F CP CG + EL FSFN P GAC TC GL V + R+I Sbjct: 138 DESDESADE-----TFPCPGCGRELPELSMAHFSFNKPEGACTTCTGLSVVRQAIVSRLI 192 Query: 296 QNPELSLAGGAIRGW-DRRNFYYFQMLKSLADHY--KFDVEAPWGSLSANVHKVVLYGSG 352 + S+ A+ GW D N Q+L++ +Y FD+ P + ++LYG+ Sbjct: 193 -DENRSIPENAVYGWTDFHNNRNGQILQAAGRYYGFTFDITKPVKDYTPVERDLLLYGTD 251 Query: 353 KENIEFKYMNDRGDTSIRRHPFEGVLHNMERRYKETES-SAVREELAKFISNRPCASCEG 411 + + + ++ + FEGV+ + RRY E S +A RE+L + + C CEG Sbjct: 252 SPQFKRHFPGIKPPSTSAKGRFEGVITTLMRRYDEHASDAAYREKLDDLFTTQTCTDCEG 311 Query: 412 TRLRREARHVYVENTPLPAISDMSIGHAMEFFNNL--KLAGQRAKIAEKILKEIGDRLKF 469 TRLR E+R V V + A+S +S+ + +L +L Q A IL ++ +R++ Sbjct: 312 TRLRPESRAVTVAGLSIDAVSRLSLKDLDAWLQSLPQQLTDQEMLFARPILDDLQERIRR 371 Query: 470 LVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLG 529 L+ VG+ YLTL RS T+S GEA+R+RLA+ +G+GL G++YVLDEP+IGLHQRD RL+ Sbjct: 372 LIEVGVGYLTLERSTPTISAGEARRLRLAALLGSGLTGMLYVLDEPTIGLHQRDTGRLIS 431 Query: 530 TLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTG 589 L LRDLGNTV+VVEHD + I+AAD++IDIGPGAG +GG++VA G + SLTG Sbjct: 432 VLRRLRDLGNTVLVVEHDLELIKAADYLIDIGPGAGKYGGQIVAAGTPAEVAQTEGSLTG 491 Query: 590 QYMSGKRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTL 649 +++G + VP+ R + L + GAR NL ++T+ +P+GL +TGVSGSGKS+L Sbjct: 492 AFIAGTMTVPVPETRRKRG-QSALMIKGARHFNLNNLTIEIPLGLLVAVTGVSGSGKSSL 550 Query: 650 INDTLFPIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFT 709 I L A ++LNG T +P + I G E+ DKVI IDQS I R PRSN ATY+ FT Sbjct: 551 IFKILATAAHQRLNG-TSEKPGDHDSITGWEYIDKVITIDQSQILRIPRSNAATYSDAFT 609 Query: 710 PVRELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGK 769 P+RE FA P+ + T +FSFNV GGRCE CQG G + V+MHFLP++ V C C+G+ Sbjct: 610 PIREAFAATPDGKKNKATARQFSFNVPGGRCERCQGAGTLAVKMHFLPEVEVRCPACRGR 669 Query: 770 RYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATT 829 R+ RETL IKY+G I +VL+MT+EEA E F VPA+A +LQ + DVGL Y++LGQ ATT Sbjct: 670 RFKRETLAIKYRGYDISQVLEMTVEEALELFSDVPAIASRLQFMSDVGLGYLKLGQPATT 729 Query: 830 LSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIE 889 LSGGEAQR+KLAREL + TG+TLY+LDEPTTGLH AD +LL VL +L D GN+++VIE Sbjct: 730 LSGGEAQRLKLARELGRSSTGRTLYLLDEPTTGLHPADTARLLQVLQRLVDAGNSLIVIE 789 Query: 890 HNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLKPML 940 HNLD++K ADW++DLGPEGG+ GG ++ GTP VAE E S+T ++LK L Sbjct: 790 HNLDLVKAADWVIDLGPEGGAEGGRLVAEGTPGEVAEVEESYTGQYLKTRL 840 Score = 137 bits (346), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 67/120 (55%), Positives = 89/120 (74%), Gaps = 8/120 (6%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLS--AYA 61 IE+R AR HNLKN+NL IP++K++V+TGLSGSGKS++A D L EGQR+Y+ESL + Sbjct: 5 IEIRNARLHNLKNVNLDIPKNKIVVITGLSGSGKSTIAMDILLKEGQRQYMESLGMITFG 64 Query: 62 RQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCP 121 R +P VD I GLSP IS++Q +H+PRSTVGT+T+I YLR+L+AR+G CP Sbjct: 65 RT------RPPVDSIVGLSPTISVDQYLLNHSPRSTVGTVTDIFTYLRVLYARIGHRNCP 118 Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 59/184 (32%), Positives = 77/184 (41%), Gaps = 48/184 (26%) Query: 612 VLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQ----LNGATI 667 +++ AR +NLK+V L +P ITG+SGSGKST+ D L QRQ L T Sbjct: 4 TIEIRNARLHNLKNVNLDIPKNKIVVITGLSGSGKSTIAMDILLKEGQRQYMESLGMITF 63 Query: 668 AEPAPYRD-IQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFA---------- 716 P D I GL I +DQ + +PRS T T +FT +R L+A Sbjct: 64 GRTRPPVDSIVGLS---PTISVDQYLLNHSPRSTVGTVTDIFTYLRVLYARIGHRNCPHC 120 Query: 717 --GVP----ESRARGY-------------TPG-----------RFSFNVRGGRCEACQGD 746 VP ES+A + PG FSFN G C C G Sbjct: 121 GMEVPPMGFESQAYDWQDESDESADETFPCPGCGRELPELSMAHFSFNKPEGACTTCTGL 180 Query: 747 GVIK 750 V++ Sbjct: 181 SVVR 184 Score = 55.8 bits (133), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 40/112 (35%), Positives = 53/112 (47%), Gaps = 15/112 (13%) Query: 6 VRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQFL 65 ++GAR NL N+ + IP L+ VTG+SGSGKSSL F L +R Sbjct: 516 IKGARHFNLNNLTIEIPLGLLVAVTGVSGSGKSSLIFKILATAAHQR-----------LN 564 Query: 66 SLMEKP-DVDHIEG---LSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFA 113 EKP D D I G + I+I+Q PRS T ++ +R FA Sbjct: 565 GTSEKPGDHDSITGWEYIDKVITIDQSQILRIPRSNAATYSDAFTPIREAFA 616 >UniRef50_Q124L1 UvrA family protein n=23 Tax=cellular organisms RepID=Q124L1_POLSJ Length = 2024 Score = 624 bits (1610), Expect = e-177, Method: Compositional matrix adjust. Identities = 408/1046 (39%), Positives = 562/1046 (53%), Gaps = 137/1046 (13%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 63 I +RGAR HNLKN++L I +L VVTG SGSGKSSL FDTL+AEGQRRYVE+ SAYARQ Sbjct: 16 IRIRGARQHNLKNLDLDIRTGELTVVTGPSGSGKSSLVFDTLFAEGQRRYVETFSAYARQ 75 Query: 64 FLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGE------ 117 FL M+KP VD +EG+ PAI+I+Q + + RSTVGT+TE++D+L+LL+AR + Sbjct: 76 FLDRMDKPAVDKVEGVPPAIAIDQSNPVRSSRSTVGTMTELNDHLKLLYARSAQLFDKQT 135 Query: 118 PRCPDHDVP------LAAQTVSQMVDNVLSQPE------------------------GKR 147 + HD P L A+T + + + P G R Sbjct: 136 AQLVRHDSPESIYAGLMARTAAVEQAQLSAAPPQRELAPLHDERGSATPEAREATSVGVR 195 Query: 148 LMLLAPIIKERKGEHTKTLENLASQGYIRARIDGEVCDLSDPPKLELQKKHTIEVVVDRF 207 L++ P+ + + L++ G+ R + ++ + P KL ++VV DRF Sbjct: 196 LVMTFPVELPGNTSAEEVTQWLSASGFTRVHAERQISTPAGPHKL-------LDVVADRF 248 Query: 208 KVRDDLTQRLAESFETALELSGGTAVVADMDDPKA-------EELL-FSANFACPICGYS 259 +++ R E+ E AL+ GG V M A EE+ FS CP Sbjct: 249 RIQTTEKVRAIEAIEMALKRGGGRLNVYVMGAGPASPSSATPEEMWRFSTGLHCPDSDTR 308 Query: 260 MRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPELSLAGGAIRGWDRRNFYYFQ 319 + P LFSFN+ GAC TC G G D VI N +L+L GAI+ + Q Sbjct: 309 YTDPTPSLFSFNSAMGACETCRGFGRVIGVDYGLVIPNDKLTLRAGAIKVMQTPAWQEAQ 368 Query: 320 M-LKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKENIEFKYMNDRGDTSIRRHPFEGVL 378 L A+ + PW L+ V+ GS N ++ +H F Sbjct: 369 DDLMRHAETAGIPRDTPWYKLTPEQQAWVINGSPSWNGKWN-----------QHWF---- 413 Query: 379 HNMERRYKETESSA----VREELAKFISNRPCASCEGTRLRREA---------------- 418 ++R + ES A +R L+K+ S C +C G RL+ E+ Sbjct: 414 -GIKRFFAYLESKAYKMHIRVLLSKYRSYTQCETCGGARLKLESLLWRLGSKEAADAVLP 472 Query: 419 ------------RHVYVENTPLPAISDM---SIGHAMEFFNNLKLAGQRAKIAEKILK-- 461 +E P + D+ I +FF +L LA + +K LK Sbjct: 473 PGQRFMPVGVQWSRQQLEALPGLCLHDLMRLPIDRLQKFFASLSLAAEGDDAEQKALKLL 532 Query: 462 --EIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGL 519 EI R+K+L +VG+ YLTL R + TLSGGE QRI L + +G LV ++VLDEPSIGL Sbjct: 533 FEEIQTRVKYLCDVGIGYLTLDRQSRTLSGGEVQRINLTTALGTSLVNTLFVLDEPSIGL 592 Query: 520 HQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEA 579 H RD R+ + LRD GNT++VVEHD + AAD +ID+GPG G GG++V +G E Sbjct: 593 HPRDMNRITQAMHRLRDAGNTLVVVEHDPAVMLAADRMIDMGPGPGEKGGQIVFDGTPED 652 Query: 580 IMAVPESLTGQYMSGKRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCIT 639 + ++LTG Y+ ++++ + KR ++ L L GAR +NLK++T+ P+ C+T Sbjct: 653 LRHA-DTLTGAYLGSRKRVGLGLKRAVSDNTPRLILEGARDHNLKNLTVEFPLQRLVCVT 711 Query: 640 GVSGSGKSTLINDTLFPIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRS 699 GVSGSGKSTL+ D L P RQ AT P + + G +H V+ +DQSPIG+T RS Sbjct: 712 GVSGSGKSTLMQDILAPALLRQFGKAT-ETPGLHDRLMGADHLTDVVFVDQSPIGKTARS 770 Query: 700 NPATYTGVFTPVRELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDI 759 NPA+Y G + VRELFA P +R R YT +FSFN GRC C G G VEM FL D+ Sbjct: 771 NPASYVGAWDAVRELFAQSPLARQRSYTATKFSFNNGDGRCPTCGGSGFEHVEMQFLSDV 830 Query: 760 YVPCDQCKGKRYNRETLEIKYKGKTI----------HEVLDMTIEEAREFFDAVPALARK 809 Y+ C C GKRY E LE+ + K I +VL++T+ EA + F + R Sbjct: 831 YLRCPDCDGKRYRPEILEVTIERKAIGQLKPVLMNVSDVLELTVSEAVQLFAQDREVLRA 890 Query: 810 LQTLMDVGLTYIRLGQSATTLSGGEAQRVKLA-------RELSKRGTGQ----------- 851 LQ ++DVGL Y++LGQ TLSGGEAQR+KLA R SK + Sbjct: 891 LQPIVDVGLEYVKLGQPVPTLSGGEAQRLKLAGFLAEASRTASKSSASKQALALKHPGRG 950 Query: 852 TLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADWIVDLGPEGGSG 911 TL++ DEPTTGLHF DI +L+ L KL D G++++VIEHNLDVI++ADW++DLGPEGG G Sbjct: 951 TLFLFDEPTTGLHFDDIAKLMRALRKLMDAGHSLIVIEHNLDVIRSADWLIDLGPEGGEG 1010 Query: 912 GGEILVSGTPETVAECEASHTARFLK 937 GG ++ GTPE V + SHTA+ L+ Sbjct: 1011 GGLLVAQGTPEEVRQHPTSHTAKALR 1036 Score = 353 bits (906), Expect = 2e-95, Method: Compositional matrix adjust. Identities = 229/591 (38%), Positives = 320/591 (54%), Gaps = 71/591 (12%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 63 I++ A+ +NLK++++ IPR K VVTG+SGSGKS+LAFD L+ EGQRRY+ESL+AYAR Sbjct: 1066 IQIVNAKENNLKSLSVDIPRGKFNVVTGVSGSGKSTLAFDILFNEGQRRYLESLNAYARS 1125 Query: 64 FLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCPDH 123 + +P+VD + G+ P ++IEQ+ + +STVGT TE+ +LRLL+ ++G C Sbjct: 1126 IVQPAGRPEVDAVYGIPPTVAIEQRLSRGGRKSTVGTTTEVWHFLRLLYVKLGVQHCTKD 1185 Query: 124 DVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARIDGEV 183 + Q+ + +L G+ + LLAP++ RKG +T+ + +GY RIDGE Sbjct: 1186 GAAVMPQSPESIAAQLLKTYRGQHIGLLAPLVIARKGVYTELADWARPRGYTHLRIDGEF 1245 Query: 184 CDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTA-VVADMDDPKA 242 + P+++ K+HT+E+ V V + L + TALE G V+A +D + Sbjct: 1246 LPTTGFPRIDRFKEHTVELPVADIHVTPENEAALRVALATALEHGKGVVHVLAPLDGLRG 1305 Query: 243 EELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPELSL 302 + G S + L RL +F+ ACP C PEL Sbjct: 1306 AMM----------AGASTKGLG-RLEAFSTKR-ACPVCS-------------TSYPEL-- 1338 Query: 303 AGGAIRGWDRRNFYYFQMLKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKENIEFKYMN 362 D R F Y D V+ LS KV Sbjct: 1339 --------DPRLFSYNSKHGWCPDCVGTGVK-----LSKEQRKVF--------------- 1370 Query: 363 DRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGTRLRREARHVY 422 D S+R +G E+ + E E V + C +CEGTRL ++AR V Sbjct: 1371 ---DDSVRDDDNKG----REQTFGEPEVDDV--------VDAACPTCEGTRLNKQARAVK 1415 Query: 423 VENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTLSR 482 + I+ +S+ + L LAG+ A IA ++ EI RL+FL +VGL YLTL R Sbjct: 1416 FAGVGIADIAGLSVTDVRRWVEKLALAGREAGIARDLVPEIKSRLEFLEDVGLGYLTLDR 1475 Query: 483 SAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVI 542 A TLSGGEAQRIRLA+Q+G+ L GV YVLDEP+IGLH RDN+ LL L L D GNT++ Sbjct: 1476 GAPTLSGGEAQRIRLAAQLGSNLQGVCYVLDEPTIGLHPRDNQILLSALGKLSDRGNTLV 1535 Query: 543 VVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMS 593 VVEHDED IR AD++IDIGPGAG GG++VA+G + AVPESLTG+Y++ Sbjct: 1536 VVEHDEDTIRRADNIIDIGPGAGKRGGQLVAQGTAAQLSAVPESLTGRYLA 1586 Score = 314 bits (805), Expect = 1e-83, Method: Compositional matrix adjust. Identities = 163/349 (46%), Positives = 224/349 (64%), Gaps = 22/349 (6%) Query: 613 LKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFP-----IAQRQLNGATI 667 L + A +NLK V++ +P+ +TGVSGSGKSTL D L + R Sbjct: 1674 LTVVNAGLHNLKSVSVDVPLYRLVAVTGVSGSGKSTLARDVLLTNVHAGVMLRSTKAGRD 1733 Query: 668 AEP-------APYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPE 720 A+ A I+G D+V+++DQ+PIG+TPRS PATY G + +R+LFA E Sbjct: 1734 ADDKGKTPDWAGCERIEGYAAVDRVLEVDQTPIGKTPRSCPATYIGFWDTIRKLFADTLE 1793 Query: 721 SRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKY 780 +RARGY GRFSFN GRC C+G GV + M FLPD+ V C+ C G R+N ET + + Sbjct: 1794 ARARGYGAGRFSFNTGEGRCPTCEGAGVRTIGMSFLPDVKVLCETCHGARFNPETQAVTW 1853 Query: 781 KGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKL 840 +GK+I +VL M ++EA FF ++P++A LQ L DVGL Y+ LGQ + TLSGGEAQR+KL Sbjct: 1854 RGKSIGDVLKMEVDEAVAFFASMPSIAHPLQLLKDVGLGYLTLGQPSPTLSGGEAQRIKL 1913 Query: 841 ARELSK-------RG--TGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHN 891 ELSK RG TLY+LDEPT GLH AD+++L+ VLH+L + G+++VVIEH+ Sbjct: 1914 VTELSKVRDDITRRGQKAPHTLYVLDEPTVGLHMADVEKLIHVLHRLVNGGHSVVVIEHD 1973 Query: 892 LDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLKPML 940 LDV+ ADW++DLGP+GG GG+++ S PE V + +HT L+ +L Sbjct: 1974 LDVVAEADWVIDLGPDGGDAGGQVVASAPPEAVVKL-GTHTGNALQSVL 2021 Score = 144 bits (363), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 87/247 (35%), Positives = 125/247 (50%), Gaps = 39/247 (15%) Query: 728 PGRFSFNVRGGRCEACQGDGV--IKVEMHFLPD----------------------IYVPC 763 P FS+N + G C C G GV K + D + C Sbjct: 1340 PRLFSYNSKHGWCPDCVGTGVKLSKEQRKVFDDSVRDDDNKGREQTFGEPEVDDVVDAAC 1399 Query: 764 DQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFF--------------DAVPALARK 809 C+G R N++ +K+ G I ++ +++ + R + D VP + + Sbjct: 1400 PTCEGTRLNKQARAVKFAGVGIADIAGLSVTDVRRWVEKLALAGREAGIARDLVPEIKSR 1459 Query: 810 LQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQ 869 L+ L DVGL Y+ L + A TLSGGEAQR++LA +L G Y+LDEPT GLH D Q Sbjct: 1460 LEFLEDVGLGYLTLDRGAPTLSGGEAQRIRLAAQLGSNLQG-VCYVLDEPTIGLHPRDNQ 1518 Query: 870 QLLDVLHKLRDQGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEA 929 LL L KL D+GNT+VV+EH+ D I+ AD I+D+GP G GG+++ GT ++ Sbjct: 1519 ILLSALGKLSDRGNTLVVVEHDEDTIRRADNIIDIGPGAGKRGGQLVAQGTAAQLSAVPE 1578 Query: 930 SHTARFL 936 S T R+L Sbjct: 1579 SLTGRYL 1585 Score = 124 bits (312), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 111/349 (31%), Positives = 172/349 (49%), Gaps = 47/349 (13%) Query: 406 CASCEGTRLRREARHVYVENTPL----PAISDMSIGHAMEFFNNLKLAGQRAKIAEKILK 461 C C+G R R E V +E + P + ++S + ++L Q + Sbjct: 834 CPDCDGKRYRPEILEVTIERKAIGQLKPVLMNVSDVLELTVSEAVQLFAQD--------R 885 Query: 462 EIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLA---------------SQIGAGLV 506 E+ L+ +V+VGL Y+ L + TLSGGEAQR++LA S+ L Sbjct: 886 EVLRALQPIVDVGLEYVKLGQPVPTLSGGEAQRLKLAGFLAEASRTASKSSASKQALALK 945 Query: 507 ----GVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGP 562 G +++ DEP+ GLH D +L+ L L D G+++IV+EH+ D IR+AD +ID+GP Sbjct: 946 HPGRGTLFLFDEPTTGLHFDDIAKLMRALRKLMDAGHSLIVIEHNLDVIRSADWLIDLGP 1005 Query: 563 GAGVHGGEVVAEGPLEAIMAVPESLTG----QYMSGKRKI----EVPKKRVPANP--EKV 612 G GG +VA+G E + P S T +Y ++ EV K P + Sbjct: 1006 EGGEGGGLLVAQGTPEEVRQHPTSHTAKALREYELAMGQVHGVEEVRPKAWTTRPAFSNL 1065 Query: 613 LKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQ----LNGA--T 666 +++ A+ NNLK +++ +P G F +TGVSGSGKSTL D LF QR+ LN + Sbjct: 1066 IQIVNAKENNLKSLSVDIPRGKFNVVTGVSGSGKSTLAFDILFNEGQRRYLESLNAYARS 1125 Query: 667 IAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELF 715 I +PA ++ + + I+Q +S T T V+ +R L+ Sbjct: 1126 IVQPAGRPEVDAVYGIPPTVAIEQRLSRGGRKSTVGTTTEVWHFLRLLY 1174 Score = 121 bits (304), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 75/212 (35%), Positives = 109/212 (51%), Gaps = 26/212 (12%) Query: 382 ERRYKETESSAVREELAKFISNRP--CASCEGTRLRREARHVYVENTPLPAISDMSIGHA 439 E R E + VR F+ + C +C G R E + V + + M + A Sbjct: 1810 EGRCPTCEGAGVRTIGMSFLPDVKVLCETCHGARFNPETQAVTWRGKSIGDVLKMEVDEA 1869 Query: 440 MEFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLAS 499 + FF ++ I L+ L +VGL YLTL + + TLSGGEAQRI+L + Sbjct: 1870 VAFFASMP--------------SIAHPLQLLKDVGLGYLTLGQPSPTLSGGEAQRIKLVT 1915 Query: 500 QI----------GAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDED 549 ++ G +YVLDEP++GLH D E+L+ L L + G++V+V+EHD D Sbjct: 1916 ELSKVRDDITRRGQKAPHTLYVLDEPTVGLHMADVEKLIHVLHRLVNGGHSVVVIEHDLD 1975 Query: 550 AIRAADHVIDIGPGAGVHGGEVVAEGPLEAIM 581 + AD VID+GP G GG+VVA P EA++ Sbjct: 1976 VVAEADWVIDLGPDGGDAGGQVVASAPPEAVV 2007 Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 43/120 (35%), Positives = 63/120 (52%), Gaps = 6/120 (5%) Query: 603 KRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQL 662 ++ PA + +++ GAR +NLK++ L + G T +TG SGSGKS+L+ DTLF QR+ Sbjct: 6 RKDPAMSQGTIRIRGARQHNLKNLDLDIRTGELTVVTGPSGSGKSSLVFDTLFAEGQRRY 65 Query: 663 NGATIAEPAPYRDIQGLEHFDKV------IDIDQSPIGRTPRSNPATYTGVFTPVRELFA 716 A + D DKV I IDQS R+ RS T T + ++ L+A Sbjct: 66 VETFSAYARQFLDRMDKPAVDKVEGVPPAIAIDQSNPVRSSRSTVGTMTELNDHLKLLYA 125 Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 39/116 (33%), Positives = 57/116 (49%), Gaps = 15/116 (12%) Query: 3 KIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYAR 62 ++ + GAR HNLKN+ + P +L+ VTG+SGSGKS+L D L A R Sbjct: 684 RLILEGARDHNLKNLTVEFPLQRLVCVTGVSGSGKSTLMQDILA-----------PALLR 732 Query: 63 QFLSLMEKPDV-DHIEG---LSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFAR 114 QF E P + D + G L+ + ++Q RS + D +R LFA+ Sbjct: 733 QFGKATETPGLHDRLMGADHLTDVVFVDQSPIGKTARSNPASYVGAWDAVRELFAQ 788 Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 64/254 (25%), Positives = 100/254 (39%), Gaps = 41/254 (16%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 63 + V A HNLK++++ +P +L+ VTG+SGSGKS+LA D L + + R Sbjct: 1674 LTVVNAGLHNLKSVSVDVPLYRLVAVTGVSGSGKSTLARDVLLTNVHAGVMLRSTKAGRD 1733 Query: 64 FLSLMEKPD---VDHIEGLSP---AISIEQKSTSHNPRSTVGTITEIHDYLRLLFA---- 113 + PD + IEG + + ++Q PRS T D +R LFA Sbjct: 1734 ADDKGKTPDWAGCERIEGYAAVDRVLEVDQTPIGKTPRSCPATYIGFWDTIRKLFADTLE 1793 Query: 114 -------------RVGEPRCPD--------------HDVPLAAQTVSQMVDNVLSQPEGK 146 GE RCP DV + +T N +Q Sbjct: 1794 ARARGYGAGRFSFNTGEGRCPTCEGAGVRTIGMSFLPDVKVLCETCHGARFNPETQAVTW 1853 Query: 147 RLMLLAPIIKERKGEHTKTLENLASQGY---IRARIDGEVCDLSDP-PKLELQKKHTIEV 202 R + ++K E ++ S + + + L P P L + I++ Sbjct: 1854 RGKSIGDVLKMEVDEAVAFFASMPSIAHPLQLLKDVGLGYLTLGQPSPTLSGGEAQRIKL 1913 Query: 203 VVDRFKVRDDLTQR 216 V + KVRDD+T+R Sbjct: 1914 VTELSKVRDDITRR 1927 >UniRef50_B6W740 Putative uncharacterized protein n=1 Tax=Anaerococcus hydrogenalis DSM 7454 RepID=B6W740_9FIRM Length = 610 Score = 623 bits (1606), Expect = e-176, Method: Compositional matrix adjust. Identities = 305/604 (50%), Positives = 423/604 (70%), Gaps = 6/604 (0%) Query: 2 DKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYA 61 +KI ++GART+NLKN++L +PRDK+IV TGLSGSGKS+LAFDT+YAEGQRRYVESLS+YA Sbjct: 4 NKIVIKGARTNNLKNVDLTLPRDKMIVFTGLSGSGKSTLAFDTIYAEGQRRYVESLSSYA 63 Query: 62 RQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCP 121 RQFL ++K DVD IEGLSP+ISI+QK+T+ NPRSTV T+TEI+DY RLLFAR+G+ CP Sbjct: 64 RQFLGNLDKADVDAIEGLSPSISIDQKTTNRNPRSTVATVTEIYDYYRLLFARIGDAYCP 123 Query: 122 DHDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARIDG 181 + AQ++ QMVD +L R+ +LAP+++ +KG+H K L+N+ GY+R IDG Sbjct: 124 VCGKKIEAQSIDQMVDRILKLENKTRIQILAPVVRAQKGQHKKKLQNIQKMGYVRVMIDG 183 Query: 182 EVCDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVADMDDPK 241 E D+ + +L KKH I ++VDR +++ + RLA+S ETALEL+ G + +D Sbjct: 184 ERYDIEEEIELSKTKKHDISIIVDRIVIKEGINSRLADSLETALELTDGLVQINVID--- 240 Query: 242 AEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPELS 301 E+ + S+ ACP S+ E+ P +FSFN P G CP C+GLG DPD VI + LS Sbjct: 241 GEDFILSSKLACPDGHVSLPEITPNMFSFNAPQGMCPECNGLGFHLQIDPDLVIPDKNLS 300 Query: 302 LAGGAIRGW--DRRNFYYFQMLKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKENIEFK 359 + GAI + + YY +M+K++A ++KF ++ P + + +LYG+ KE + F Sbjct: 301 INEGAIDPYATSGKGTYYNEMIKAIAKNHKFSLDEPIKNAPKKMIDEILYGTKKE-VSFT 359 Query: 360 YMNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGTRLRREAR 419 + + FEG + N+ RY+ T S A ++ + F+S C SC G RL+ E Sbjct: 360 FDSHFSGRKNYTGHFEGAIKNLSDRYERTNSDAQKKRMRGFMSEEECKSCHGHRLKDEIL 419 Query: 420 HVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLT 479 + V+ + I++MS+ +EFF+NLKL+ + KIAE I+KEI R+KFL +VGL YL+ Sbjct: 420 AIKVDGKSISEIANMSVDKTIEFFDNLKLSPMKEKIAELIIKEIKARVKFLQDVGLGYLS 479 Query: 480 LSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGN 539 LSRSA TLSGGE+QRIRLA+QIG+GLVGV YVLDEPSIGLHQRDN++L+ +L +L D+GN Sbjct: 480 LSRSASTLSGGESQRIRLATQIGSGLVGVCYVLDEPSIGLHQRDNDKLIKSLRNLTDIGN 539 Query: 540 TVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIE 599 T+I+VEHDED ++AAD+++DIGP AGVHGGE+VA+G L I +S+TG Y+SGK K + Sbjct: 540 TLIIVEHDEDTMKAADYLVDIGPKAGVHGGEIVAKGSLSDIKNCKKSITGAYLSGKEKFQ 599 Query: 600 VPKK 603 KK Sbjct: 600 YQKK 603 Score = 147 bits (370), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 73/188 (38%), Positives = 112/188 (59%), Gaps = 15/188 (7%) Query: 763 CDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFD--------------AVPALAR 808 C C G R E L IK GK+I E+ +M++++ EFFD + + Sbjct: 406 CKSCHGHRLKDEILAIKVDGKSISEIANMSVDKTIEFFDNLKLSPMKEKIAELIIKEIKA 465 Query: 809 KLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADI 868 +++ L DVGL Y+ L +SA+TLSGGE+QR++LA ++ G Y+LDEP+ GLH D Sbjct: 466 RVKFLQDVGLGYLSLSRSASTLSGGESQRIRLATQIGSGLVG-VCYVLDEPSIGLHQRDN 524 Query: 869 QQLLDVLHKLRDQGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECE 928 +L+ L L D GNT++++EH+ D +K AD++VD+GP+ G GGEI+ G+ + C+ Sbjct: 525 DKLIKSLRNLTDIGNTLIIVEHDEDTMKAADYLVDIGPKAGVHGGEIVAKGSLSDIKNCK 584 Query: 929 ASHTARFL 936 S T +L Sbjct: 585 KSITGAYL 592 Score = 72.8 bits (177), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 57/183 (31%), Positives = 85/183 (46%), Gaps = 20/183 (10%) Query: 610 EKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAE 669 E + + GAR NNLK+V LTLP TG+SGSGKSTL DT++ QR+ + + Sbjct: 3 ENKIVIKGARTNNLKNVDLTLPRDKMIVFTGLSGSGKSTLAFDTIYAEGQRRYVESLSSY 62 Query: 670 PAPY------RDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESRA 723 + D+ +E I IDQ R PRS AT T ++ R LFA + ++ Sbjct: 63 ARQFLGNLDKADVDAIEGLSPSISIDQKTTNRNPRSTVATVTEIYDYYRLLFARIGDA-- 120 Query: 724 RGYTPGRFSFNVRGGRCEACQGDG----VIKVEMHFLPDIYVPCDQCKGKRYNRETLEIK 779 Y P V G + EA D ++K+E I P + + ++ ++ I+ Sbjct: 121 --YCP------VCGKKIEAQSIDQMVDRILKLENKTRIQILAPVVRAQKGQHKKKLQNIQ 172 Query: 780 YKG 782 G Sbjct: 173 KMG 175 >UniRef50_B1XYK7 Excinuclease ABC, A subunit n=2 Tax=Burkholderiales Genera incertae sedis RepID=B1XYK7_LEPCP Length = 1935 Score = 621 bits (1602), Expect = e-176, Method: Compositional matrix adjust. Identities = 392/995 (39%), Positives = 545/995 (54%), Gaps = 91/995 (9%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 63 I +RGAR HNLKN++L I +L VVTG SGSGKSSL FDTLYAEGQRRYVE+ SAYARQ Sbjct: 17 IRIRGARQHNLKNLDLDIRTGELTVVTGPSGSGKSSLVFDTLYAEGQRRYVETFSAYARQ 76 Query: 64 FLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCPDH 123 FL M++P VD +EG+ PAI+I+Q + RSTVGT+TE++D+L+LLFAR + D Sbjct: 77 FLDRMDRPAVDSVEGVPPAIAIDQTNPVRTSRSTVGTMTELNDHLKLLFARAAQLFDQDT 136 Query: 124 DVPLAAQTVSQMVDNVLSQPEGK---RLMLLAPIIKERKGEHTKTLENLASQGYIRARID 180 P+ + ++ ++ E RL++ P+ + + L++ GY R + Sbjct: 137 AQPVREDDPDTIWADLKARSEAAGDPRLVITFPVELPAGTTPAEIEQWLSASGYTRVHAE 196 Query: 181 GEVCDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVADMDDP 240 EV + P K+ ++VV DRF+ R+ E+ ETAL+ G V D Sbjct: 197 REVATPTGPRKV-------LDVVADRFRFSGAEKIRVNEALETALKRGGRCNVYVVPTDG 249 Query: 241 KAEELL-FSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPE 299 E++ +S CP +P +FSFN+ GAC TC G G D VI +P Sbjct: 250 GDEQVWRYSQGLHCPESDRRYSHPQPAMFSFNSAFGACETCRGFGRVIGVDFGLVIPDPR 309 Query: 300 LSLAGGAIRGWDRRNFYYFQ--MLKSLADHYKFDVEAPWGSLSANVHKVVLYGS----GK 353 +L GGAI+ + Q ++K D ++ W LS + V+ GS GK Sbjct: 310 KTLRGGAIKPLTTPAWKECQDDLIKYAGD-AGIPRDSAWAQLSESQKSWVIDGSPNWTGK 368 Query: 354 ENIEFKYMNDRGDTSIRRHPFEGVLHNMERRYKETESSA----VREELAKFISNRPCASC 409 N ++ + ++R ++ ES A +R L+K+ S PC C Sbjct: 369 WNQQW--------------------YGIKRFFEYLESKAYKMHIRVLLSKYRSYTPCGDC 408 Query: 410 EGTRLRREA----------------------------RHVYVENTPLPAISDM---SIGH 438 G RL+ E+ +E P ++ D+ I Sbjct: 409 GGARLKTESLLWRLGEKQQADLGLPPAKRFMPVGVKWSRAQLEALPGLSLHDLMLLPIDR 468 Query: 439 AMEFFNNLKLAGQ-RAKIAEKILKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRL 497 FF+ L L Q + +L EI RLK+L +VGL YL+L R + TLSGGE QRI L Sbjct: 469 MRVFFDKLDLPSQMLDDALQLLLDEIRTRLKYLCDVGLGYLSLDRQSRTLSGGEVQRINL 528 Query: 498 ASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHV 557 + +G LV ++VLDEPSIGLH RD R+ ++ LRD GNT++VVEHD + AAD V Sbjct: 529 TTALGTSLVNTLFVLDEPSIGLHPRDMHRINEAMLRLRDAGNTLVVVEHDPAVMLAADRV 588 Query: 558 IDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEVPKKRVPANPEKVLKLTG 617 ID+GPG G GG +V +G E + A E+LTG Y+ +R I + R + L + G Sbjct: 589 IDLGPGPGTQGGRIVFDGTPEDLKAA-ETLTGAYLGARRSIGLGLMRPVLDSTPRLIIEG 647 Query: 618 ARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAEPAPYRDIQ 677 R +NLK++++ P+ C+TGVSGSGKSTL+ D L+P R A+ P + + Sbjct: 648 VREHNLKNISVEFPLQRLVCVTGVSGSGKSTLMQDVLYPALARHFGQAS-ESPGEHDRLL 706 Query: 678 GLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESRARGYTPGRFSFNVRG 737 G + + +DQSPIG+T RSNPA+Y G F VR++FA +P ++ R YT G FSFN Sbjct: 707 GADWISDAVFVDQSPIGKTARSNPASYVGAFDTVRDIFAALPAAQQRNYTAGMFSFNAGD 766 Query: 738 GRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKY----KGKTIHEVLDMTI 793 GRC C G G VEM FL D+Y+ C C G RY E E+K K +I +VL++T+ Sbjct: 767 GRCPTCGGSGFEHVEMQFLSDVYLRCPDCDGTRYRPELREVKVERLGKSLSISDVLELTV 826 Query: 794 EEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLA---RELSKRGTG 850 +A F + R LQ L DVGL Y++LGQ TLSGGEAQR+KLA E +K G+ Sbjct: 827 ADAVRLFADDREVVRALQPLADVGLDYVKLGQPVPTLSGGEAQRLKLAGFLAEAAKSGSA 886 Query: 851 Q--------TLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADWIV 902 TL++ DEPTTGLHF DI +L+ KL + G++++VIEHNLDV++ +DWIV Sbjct: 887 SKQKLARKGTLFLFDEPTTGLHFDDIAKLMRAFRKLLEAGHSLLVIEHNLDVVRASDWIV 946 Query: 903 DLGPEGGSGGGEILVSGTPETVAECEASHTARFLK 937 DLGPEGG GGE++ GTP + SHT + L+ Sbjct: 947 DLGPEGGEAGGELVAEGTPADLRAHPTSHTGQSLR 981 Score = 478 bits (1230), Expect = e-133, Method: Compositional matrix adjust. Identities = 276/562 (49%), Positives = 371/562 (66%), Gaps = 23/562 (4%) Query: 401 ISNRPCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKIL 460 + + PC +C G RL ++ V + A++ +S+ A + KL G+ IA ++ Sbjct: 1373 LVDAPCGTCHGARLNPVSQAVRFRGESIAALAALSVNDAARWVARQKLDGREGAIARDVV 1432 Query: 461 KEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLH 520 EI RL FL VGL YLTL R+A TLSGGEAQRIRLA+Q+G+ L GV YVLDEP+IGLH Sbjct: 1433 SEIRSRLSFLDEVGLGYLTLDRAAPTLSGGEAQRIRLAAQLGSNLQGVCYVLDEPTIGLH 1492 Query: 521 QRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAI 580 RDN+ LL L L GNT++VVEHDED IR ADH+IDIGPGAG GG ++AEG + Sbjct: 1493 PRDNQVLLNALHKLGASGNTLVVVEHDEDTIRRADHIIDIGPGAGRRGGRIMAEGTAAEL 1552 Query: 581 MAVPESLTGQYMSGKRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITG 640 M P+S+TG++++ K + +R L L GA+ +NL+DV + +P+ +TG Sbjct: 1553 MLHPDSITGRFLNAPLKHPLKARRPVDAQTPGLTLRGAKLHNLRDVDVEVPLARLVAVTG 1612 Query: 641 VSGSGKSTLINDTLFPIAQRQLNGATIAEPAPYR-------DIQGLEHFDKVIDIDQSPI 693 VSGSGKSTL D L Q +N + A R ++G + D+V+++DQ+PI Sbjct: 1613 VSGSGKSTLARDVLLANVQAIVNHKLAGKNAGARPAWTGCTGLEGWSNVDRVLEVDQTPI 1672 Query: 694 GRTPRSNPATYTGVFTPVRELFAGVPESRARGYTPGRFSFNV------RGGRCEACQGDG 747 G+TPRS PATY G + +R+LF E++ARGY GRFSFN+ GGRC C+G G Sbjct: 1673 GKTPRSCPATYIGFWDTIRKLFTETLEAKARGYAAGRFSFNIGGKSAGGGGRCPGCEGQG 1732 Query: 748 VIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALA 807 + +EM FLPD+ VPCD C G R+N ETL + ++GK+I EVL M ++EA +FF ++P++A Sbjct: 1733 MRTIEMAFLPDVKVPCDLCHGARFNPETLAVTWRGKSIGEVLQMEVDEAVDFFASMPSIA 1792 Query: 808 RKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSK-------RG--TGQTLYILDE 858 LQ L DVGL Y+ LGQ + TLSGGEAQR+KL ELSK RG TLY+LDE Sbjct: 1793 HPLQLLKDVGLGYLTLGQPSPTLSGGEAQRIKLVTELSKVRDDVTRRGQKAPHTLYVLDE 1852 Query: 859 PTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVS 918 PT GLH AD+++L+ VLH+L D G++++VIEH+LDVI ADW++DLGPEGGSGGG+++V Sbjct: 1853 PTVGLHMADVEKLIKVLHRLVDGGHSVIVIEHDLDVIAEADWVIDLGPEGGSGGGQVVVC 1912 Query: 919 GTPETVAECEASHTARFLKPML 940 GTPE V + SHT LK +L Sbjct: 1913 GTPEAVVKSR-SHTGVALKAVL 1933 Score = 204 bits (518), Expect = 2e-50, Method: Compositional matrix adjust. Identities = 124/317 (39%), Positives = 174/317 (54%), Gaps = 35/317 (11%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 63 I++ AR HNLK +++ IPR K VVTG+SGSGKS+LAFD L+ EGQRRY+ESL+AYAR Sbjct: 1023 IQIVNAREHNLKGLSVNIPRGKFSVVTGVSGSGKSTLAFDILFNEGQRRYLESLNAYARS 1082 Query: 64 FLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGE---PRC 120 + +P+VD + G+ P ++IEQ+ + +STV T TE+ +LRLL+ ++G P+C Sbjct: 1083 IVQPAGRPEVDAVYGIPPTVAIEQRLSRGGRKSTVATTTEVWHFLRLLYVKLGTLYCPKC 1142 Query: 121 ---------------PDHDVPLAAQTVSQMVDNVLSQPE-----GKRLMLLAPIIKERKG 160 PD V + QT Q+ +L PE G+ + LLAP++ RKG Sbjct: 1143 SDFHAPHGDVAPGQDPDGWVAVRPQTPEQIAAQMLRAPEAGGYRGQHIGLLAPLVVNRKG 1202 Query: 161 EHTKTLENLASQGYIRARIDGEVCDLSDPPKLELQKKHTIEVVVDRFKVRDD----LTQR 216 +T + +GY R+DGE PK++ K+HTIE+ V V D L + Sbjct: 1203 VYTDLAKWAKGKGYTHLRVDGEFLPTDKWPKIDRYKEHTIELPVADLIVEVDNEPLLKAK 1262 Query: 217 LAESFETA-------LELSG-GTAVVADMDDPKAEELLFSANFACPICGYSMRELEPRLF 268 LAE+ E L G TA+ A +FS ACP CG S EL+PR+F Sbjct: 1263 LAEALEHGKGVLHLLTPLKGLKTAMAAGESGRIGRTQVFSIKRACPQCGTSYPELDPRMF 1322 Query: 269 SFNNPAGACPTCDGLGV 285 S+N+ G C C G G+ Sbjct: 1323 SYNSKHGWCVDCVGTGL 1339 Score = 135 bits (339), Expect = 9e-30, Method: Compositional matrix adjust. Identities = 112/351 (31%), Positives = 177/351 (50%), Gaps = 52/351 (14%) Query: 406 CASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGD 465 C C+GTR R E R V VE +G ++ + L+L A +E+ Sbjct: 792 CPDCDGTRYRPELREVKVER----------LGKSLSISDVLELTVADAVRLFADDREVVR 841 Query: 466 RLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLA------------SQIGAGLVGVMYVLD 513 L+ L +VGL+Y+ L + TLSGGEAQR++LA S+ G +++ D Sbjct: 842 ALQPLADVGLDYVKLGQPVPTLSGGEAQRLKLAGFLAEAAKSGSASKQKLARKGTLFLFD 901 Query: 514 EPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVA 573 EP+ GLH D +L+ L + G++++V+EH+ D +RA+D ++D+GP G GGE+VA Sbjct: 902 EPTTGLHFDDIAKLMRAFRKLLEAGHSLLVIEHNLDVVRASDWIVDLGPEGGEAGGELVA 961 Query: 574 EGPLEAIMAVPESLTGQ-----------------------YMSGKRKIEVPKKRVPANPE 610 EG + A P S TGQ ++ R+ E K+ V + Sbjct: 962 EGTPADLRAHPTSHTGQSLREYDLSLGTGGIAVEEGRPLQWVVKARRDEA-KRAVGNIAD 1020 Query: 611 KVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQ----LNGA- 665 +++++ AR +NLK +++ +P G F+ +TGVSGSGKSTL D LF QR+ LN Sbjct: 1021 EMIQIVNAREHNLKGLSVNIPRGKFSVVTGVSGSGKSTLAFDILFNEGQRRYLESLNAYA 1080 Query: 666 -TIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELF 715 +I +PA ++ + + I+Q +S AT T V+ +R L+ Sbjct: 1081 RSIVQPAGRPEVDAVYGIPPTVAIEQRLSRGGRKSTVATTTEVWHFLRLLY 1131 Score = 62.8 bits (151), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 47/140 (33%), Positives = 65/140 (46%), Gaps = 32/140 (22%) Query: 3 KIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYAR 62 ++ + G R HNLKNI++ P +L+ VTG+SGSGKS+L D LY A AR Sbjct: 642 RLIIEGVREHNLKNISVEFPLQRLVCVTGVSGSGKSTLMQDVLY-----------PALAR 690 Query: 63 QFLSLMEKP-DVDHIEG---LSPAISIEQ----KSTSHNPRSTVGTITEIHDYLRLLFA- 113 F E P + D + G +S A+ ++Q K+ NP S VG + D L A Sbjct: 691 HFGQASESPGEHDRLLGADWISDAVFVDQSPIGKTARSNPASYVGAFDTVRDIFAALPAA 750 Query: 114 ------------RVGEPRCP 121 G+ RCP Sbjct: 751 QQRNYTAGMFSFNAGDGRCP 770 Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 42/126 (33%), Positives = 64/126 (50%), Gaps = 9/126 (7%) Query: 600 VPKKRVPANPEK---VLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFP 656 +P + P K ++++ GAR +NLK++ L + G T +TG SGSGKS+L+ DTL+ Sbjct: 1 MPGQNAPPTSVKRTGLIRIRGARQHNLKNLDLDIRTGELTVVTGPSGSGKSSLVFDTLYA 60 Query: 657 IAQRQLNGATIAEPAPYRD------IQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTP 710 QR+ A + D + +E I IDQ+ RT RS T T + Sbjct: 61 EGQRRYVETFSAYARQFLDRMDRPAVDSVEGVPPAIAIDQTNPVRTSRSTVGTMTELNDH 120 Query: 711 VRELFA 716 ++ LFA Sbjct: 121 LKLLFA 126 Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 40/124 (32%), Positives = 62/124 (50%), Gaps = 13/124 (10%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLS---AY 60 + +RGA+ HNL+++++ +P +L+ VTG+SGSGKS+LA D L A Q L+ A Sbjct: 1585 LTLRGAKLHNLRDVDVEVPLARLVAVTGVSGSGKSTLARDVLLANVQAIVNHKLAGKNAG 1644 Query: 61 ARQFLS----LMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVG 116 AR + L +VD + + ++Q PRS T D +R LF Sbjct: 1645 ARPAWTGCTGLEGWSNVDRV------LEVDQTPIGKTPRSCPATYIGFWDTIRKLFTETL 1698 Query: 117 EPRC 120 E + Sbjct: 1699 EAKA 1702 >UniRef50_Q6MKF2 Excinuclease ABC subunit A n=1 Tax=Bdellovibrio bacteriovorus RepID=Q6MKF2_BDEBA Length = 866 Score = 617 bits (1591), Expect = e-175, Method: Compositional matrix adjust. Identities = 303/535 (56%), Positives = 412/535 (77%), Gaps = 2/535 (0%) Query: 406 CASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGD 465 C C G RL+ EA ++ + + +SD+ ++ L+ + IAEKI+K+I Sbjct: 333 CPDCHGARLKNEALNIRLGGKTIAELSDLGALELRDWVAKLQWKAKDQLIAEKIVKQILA 392 Query: 466 RLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNE 525 RL +L+ VG YL+LSR + TLSGGEAQRIRLA+Q+G+ L+G +YV+DEPSIGLH RD+ Sbjct: 393 RLDYLIRVGTGYLSLSRPSRTLSGGEAQRIRLATQVGSSLIGCLYVMDEPSIGLHPRDHH 452 Query: 526 RLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPE 585 RLL + L++ GNT+++VEHDED IR AD V+D+GP AGV GGE++A+G + + A P Sbjct: 453 RLLDIIGELKERGNTILLVEHDEDTIRYADFVVDLGPRAGVLGGEMMAQGTPDELAANPN 512 Query: 586 SLTGQYMSGKRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSG 645 SLTG+Y++G+ +I +PK+R N + V +LTGA GNNL++V L +P+G FT +TGVSGSG Sbjct: 513 SLTGKYLNGEMRIPIPKERRKGNGQFV-RLTGATGNNLQNVDLEIPLGTFTTVTGVSGSG 571 Query: 646 KSTLINDTLFPIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYT 705 KSTLI DTL+ I + A +A+P+PY+ I+GL+ DKVIDI+Q PIGRTPRS PATY Sbjct: 572 KSTLIIDTLYKILAQHFYKA-LAQPSPYKKIEGLDKIDKVIDINQRPIGRTPRSTPATYV 630 Query: 706 GVFTPVRELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQ 765 G+F +R+LFA +P+S+ RGY PGRFSFNV+GGRCE C G G I++EMHFL D++V CD Sbjct: 631 GLFPMIRDLFANLPDSKLRGYEPGRFSFNVKGGRCETCMGHGQIRMEMHFLSDVFVTCDT 690 Query: 766 CKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQ 825 C G+RYNRETL IKYK K+I +VL+M++ EA EFF + RKL+TL VGL Y+ LGQ Sbjct: 691 CLGRRYNRETLNIKYKSKSIADVLEMSVGEALEFFRNHTQIYRKLETLHRVGLDYMTLGQ 750 Query: 826 SATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTI 885 S+TTLSGGEAQRVKL++ELS+RGTG+TLYILDEPTTGLHF D+++L++++ +L DQGNT+ Sbjct: 751 SSTTLSGGEAQRVKLSKELSRRGTGKTLYILDEPTTGLHFDDVRKLVELIQELADQGNTV 810 Query: 886 VVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLKPML 940 +VIEHN++V+K++D ++DLGP+GG GGG+I+ +GTPE VA+ AS T +FLKP+L Sbjct: 811 LVIEHNMEVVKSSDHVIDLGPDGGKGGGQIVAAGTPEKVAKVAASETGKFLKPLL 865 Score = 331 bits (849), Expect = 7e-89, Method: Compositional matrix adjust. Identities = 155/283 (54%), Positives = 208/283 (73%), Gaps = 3/283 (1%) Query: 2 DKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYA 61 D I V+GA+ HNLKN+++ IPR+K+ V TGLSGSGKSSLAFDT+YAEGQRRYVESLSAYA Sbjct: 6 DGIVVKGAKEHNLKNVSVTIPRNKITVFTGLSGSGKSSLAFDTVYAEGQRRYVESLSAYA 65 Query: 62 RQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCP 121 R FL ++KP+VD I GLSPAI+I+QKS S NPRSTVGT+TEI+DYLRLLFA++G P CP Sbjct: 66 RNFLEQLKKPEVDSITGLSPAIAIDQKSVSTNPRSTVGTVTEIYDYLRLLFAKLGIPECP 125 Query: 122 DHDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARIDG 181 H +P+++QT Q+++ V + G + +LAP+ +KGE + A +G+++A++DG Sbjct: 126 THHIPVSSQTPQQIIEEVFKKGVGTKFFVLAPMASGKKGEFLAEFQRWAKKGFVKAKVDG 185 Query: 182 EVCDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVADMDDPK 241 ++ +L KL K H I++VVD+ ++D L RL+ES TAL ++ G ++ +D Sbjct: 186 KMIELDKATKLAKTKTHDIDLVVDQLILKDTLKLRLSESINTALSMANGRVIIETLD--- 242 Query: 242 AEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLG 284 E +S + ACP CGYS E+EPRLFSFNNP GACPTC GLG Sbjct: 243 GERTSYSLHSACPECGYSFPEIEPRLFSFNNPRGACPTCHGLG 285 Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 41/122 (33%), Positives = 65/122 (53%), Gaps = 8/122 (6%) Query: 607 ANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGAT 666 ++ E + + GA+ +NLK+V++T+P T TG+SGSGKS+L DT++ QR+ + Sbjct: 2 SHAEDGIVVKGAKEHNLKNVSVTIPRNKITVFTGLSGSGKSSLAFDTVYAEGQRRYVESL 61 Query: 667 IA------EPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFA--GV 718 A E ++ + I IDQ + PRS T T ++ +R LFA G+ Sbjct: 62 SAYARNFLEQLKKPEVDSITGLSPAIAIDQKSVSTNPRSTVGTVTEIYDYLRLLFAKLGI 121 Query: 719 PE 720 PE Sbjct: 122 PE 123 Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 41/116 (35%), Positives = 56/116 (48%), Gaps = 15/116 (12%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 63 + + GA +NL+N++L IP VTG+SGSGKS+L DTLY A+ Sbjct: 539 VRLTGATGNNLQNVDLEIPLGTFTTVTGVSGSGKSTLIIDTLY-----------KILAQH 587 Query: 64 FLSLMEKPD-VDHIEGL---SPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARV 115 F + +P IEGL I I Q+ PRST T + +R LFA + Sbjct: 588 FYKALAQPSPYKKIEGLDKIDKVIDINQRPIGRTPRSTPATYVGLFPMIRDLFANL 643 >UniRef50_B3DZR5 Excinuclease ABC subunit A, ATPase n=1 Tax=Methylacidiphilum infernorum V4 RepID=B3DZR5_METI4 Length = 1840 Score = 615 bits (1587), Expect = e-174, Method: Compositional matrix adjust. Identities = 385/986 (39%), Positives = 561/986 (56%), Gaps = 69/986 (6%) Query: 1 MDKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAY 60 M+ I +R HNLKNI+L IP L V+TGLSGSGKSSLAFDTL+AEGQ RY+E+ Y Sbjct: 1 MESIRLRKISVHNLKNIDLDIPHSTLTVITGLSGSGKSSLAFDTLFAEGQSRYIETYPPY 60 Query: 61 ARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRC 120 RQFL +EKP + IEG+ PAI++EQ T+ N RSTV T+T I DYL+LL+ARV P C Sbjct: 61 IRQFLLRVEKPKAESIEGILPAIAVEQDRTTANSRSTVATMTGIADYLKLLYARVSIPIC 120 Query: 121 PDHDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHT---KTLENLASQGYIRA 177 P P+ T +++ + S K ++ P+ R HT + + L SQGY + Sbjct: 121 PRCRQPVKKSTPKGILELLFSAYLHKSFLIGYPV---RFAPHTSFKEACQMLLSQGYSKI 177 Query: 178 RIDGEVCDLSDPPKLELQKK-HTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVAD 236 +D + + + L L I V+ KV + RL ES E + +L G ++ Sbjct: 178 WLDNRIVRIDEEFALPLPPDFQEILVIHSLEKVEYERESRLLESLEESFKL--GRGIIHT 235 Query: 237 MDDPKAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQ 296 + P+ + L FS CP + + P LFSFNNP GACP+C G G D D+VI Sbjct: 236 LFLPENQVLSFSNQLVCPQDKIAFEDPFPALFSFNNPKGACPSCHGFGRIISIDYDKVIP 295 Query: 297 NPELSLAGGAIRGWDRRNFYYFQMLKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKENI 356 LS+ GGAIR + +F ++Q+ L K +P +SA ++ Sbjct: 296 EKNLSVEGGAIRPFQSAHFAHWQIF--LERMLKKRRISPSKKISAY-----------DSR 342 Query: 357 EFKYM------NDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCE 410 E++Y+ + DT I + + G+ K+T + +R L+++ C C+ Sbjct: 343 EWEYLLKGEDPSADPDTLIEQDLWCGLEGFFSILEKKTYQTHIRVFLSRYRLYTLCPDCQ 402 Query: 411 GTRLRREA--RHVYVENTPLPAISDM---SIGHAMEFFNNLKLAGQRAKIAEKILKEIGD 465 G+R ++ ++ TPL +I + I + + L + Q K KI +EI Sbjct: 403 GSRFNKKTLDYKIFFGQTPL-SIGEFLHSPISELIPIVDKLDVP-QSDKATLKIKEEIAS 460 Query: 466 RLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNE 525 RL +L ++GL YLTL R + TLSGGE +R L +G L ++VLDEP+IGLH +D+ Sbjct: 461 RLGYLDHIGLGYLTLDRPSRTLSGGETRRANLTICLGNKLTHTLFVLDEPTIGLHPKDSS 520 Query: 526 RLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPE 585 RL+ + LRD GNTV+VVEHDE I+ AD+++++GPG G GGEVV G LE ++ + Sbjct: 521 RLVELIKKLRDQGNTVVVVEHDETVIKNADYIVELGPGTGEEGGEVVYAGNLEGLLLKED 580 Query: 586 SLTGQYMSGKRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSG 645 SLTG Y+SG++ + +P+KR K L++ A +NL + + +P+GLF +TGVSG G Sbjct: 581 SLTGAYLSGRKTLPLPQKRREPRQGK-LEIRKAHVHNLHGLDVDIPLGLFVTVTGVSGCG 639 Query: 646 KSTLINDT----LFPIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNP 701 KS+L++D L+ I ++LN + + G E +VI+IDQ+PI +TPRSN Sbjct: 640 KSSLVHDIIAHGLYRI--KELNPPQGTFFSGRAHLNGWEKIGEVIEIDQTPIFKTPRSNI 697 Query: 702 ATYTGVFTPVRELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYV 761 A Y G++ VR+LFA E++++G G FS N GRC C G G K+EM FL D++V Sbjct: 698 ALYLGIWQYVRKLFASTDEAQSQGIGEGSFSMNSGDGRCPRCLGLGYEKIEMQFLSDVFV 757 Query: 762 PCDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFF-----DAVPA------LARKL 810 PC C+GKR+ L I+Y+GK+I ++ +MT++EA FF +A P + +L Sbjct: 758 PCSVCEGKRFQPPILAIRYRGKSIDQIFEMTVKEASLFFCPKQDNADPQSVLCKRIVDRL 817 Query: 811 QTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTG----------------QTLY 854 L +VGL Y+RLG LSGGE+QR+K+ L ++ G Q + Sbjct: 818 GMLSEVGLDYLRLGHPLNQLSGGESQRLKILAILGEKHFGSPADPSPGKMKPGKDRQRII 877 Query: 855 ILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGE 914 ILDEPTTGLH D+++L+ +L KL + GN+++V+EHNLDVI ++DW++DLGP GG GG+ Sbjct: 878 ILDEPTTGLHMDDVKRLIGLLQKLVELGNSLIVVEHNLDVILSSDWVIDLGPLGGKQGGK 937 Query: 915 ILVSGTPETVAECEASHTARFLKPML 940 I+ G PET+A S T FL L Sbjct: 938 IIAQGPPETIAATAGSFTGFFLNEKL 963 Score = 461 bits (1186), Expect = e-128, Method: Compositional matrix adjust. Identities = 240/561 (42%), Positives = 349/561 (62%), Gaps = 34/561 (6%) Query: 406 CASCEGTRLRREARHVYVENTPLPA---------ISDMSIGHAMEFFNNLK-LAGQRAKI 455 C C+G R+ AR V + P P + + I +++F +++ + Q+ I Sbjct: 1277 CPDCQGKRINLGARSV---SLPWPLKGSKPTIDLLCSLPISLLLDYFKSIEPSSSQQKAI 1333 Query: 456 AEKILKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEP 515 EKI+ I RLKF+ +GL+YL+L R A++LS GE QR+ L SQ+G+ L GV+Y+LDEP Sbjct: 1334 VEKIVPAIIKRLKFIEEMGLHYLSLDREAQSLSAGELQRLYLCSQLGSNLQGVLYILDEP 1393 Query: 516 SIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEG 575 +IGLH +N++LL L L+ GNT+++VEHD +A++ AD ++D+GPGAGV GGE++ EG Sbjct: 1394 TIGLHPTENQKLLDCLEELKSKGNTLLIVEHDTEAMKRADKIVDLGPGAGVDGGEIIFEG 1453 Query: 576 PLEAIMAVPESLTGQYMSGKRKIEVPKK----RVPANPEKVLKLTGARGNNLKDVTLTLP 631 ++ S T +Y+ R + P K R LK+ G R +NLKD+ + +P Sbjct: 1454 NYSQLLLCKNSTTARYLC--RPMHHPLKGSDRRSCKEHPSWLKILGIRVHNLKDLDIEIP 1511 Query: 632 VGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIA-EPAPYRDIQGLEHFDKVIDIDQ 690 +G F I GVSGSGKSTL+ + +F ++ LN + + + + G E V +DQ Sbjct: 1512 LGRFVVICGVSGSGKSTLLREVIFAAVKKLLNKSPKKIQKECWSKVIGAEALGDVCFVDQ 1571 Query: 691 SPIGRTPRSNPATYTGVFTPVRELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIK 750 +PIG+ PRS P TY G+F +RELFA P SR RGYT RFS+N + GRC C+G+G I Sbjct: 1572 TPIGKNPRSTPLTYLGLFDRIRELFAQTPLSRQRGYTKSRFSYNSKEGRCPDCEGNGTIP 1631 Query: 751 VEMHFLPDIYVPCDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKL 810 V M LP ++PC+ C+GKRYN +TLE++YK K+IH++L MT EA FF + L + Sbjct: 1632 VSMPLLPLFFLPCESCEGKRYNPQTLEVRYKEKSIHDILCMTAAEACSFFSPIEKLHKPF 1691 Query: 811 QTLMDVGLTYIRLGQSATTLSGGEAQRVKLAREL--------------SKRGTGQTLYIL 856 L D+GL+Y+RLGQ TLSGGEAQR+KLA++L + LY+L Sbjct: 1692 SILCDIGLSYLRLGQPTPTLSGGEAQRIKLAKDLIAMEQKVIQKEFHWGPSRQSKILYLL 1751 Query: 857 DEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEIL 916 +EPT GLH ADI++ L + +L + G+T+VVIEH+ +VI AD++++LGP G GG+I+ Sbjct: 1752 EEPTIGLHLADIEKFLHLCQRLVELGHTVVVIEHHPEVIAEADYVIELGPGAGEKGGKII 1811 Query: 917 VSGTPETVAECEASHTARFLK 937 G PE++A+ S TA FLK Sbjct: 1812 GQGPPESLAKAANSPTAPFLK 1832 Score = 220 bits (561), Expect = 2e-55, Method: Compositional matrix adjust. Identities = 124/283 (43%), Positives = 180/283 (63%), Gaps = 6/283 (2%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 63 + +RGAR HNLK+I+L I +K V+TG+SGSGKS+LAFD L+AE +RR+++SLS Y RQ Sbjct: 986 LSIRGARHHNLKSISLEIDLEKTTVLTGISGSGKSTLAFDVLFAESRRRFLDSLSGYGRQ 1045 Query: 64 FLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCPDH 123 F+ +EKP VD IEGL P+I+IEQ+ST +STVGT++EIH +LRLLFA+ G P PD Sbjct: 1046 FIQSLEKPQVDDIEGLPPSIAIEQRSTIPGSKSTVGTLSEIHPFLRLLFAKTGIPFDPDT 1105 Query: 124 DVPLAAQTVSQMVDNV--LSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARIDG 181 Q+ +++ +V L P+ ++L +LAP++++RKG ++ + +GY RIDG Sbjct: 1106 LEEAIQQSPEEILSSVRSLLMPD-RKLRILAPLVRDRKGLYSSLAKWAQKKGYPGFRIDG 1164 Query: 182 EVCDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVADMDDPK 241 + P+L K HTI++ + + L + LA++ TAL L G V D+ + Sbjct: 1165 CWYEPGSFPRLSRFKNHTIDLWLGTVTAQSSL-EELAKNVSTALGL--GKESVIFFDETQ 1221 Query: 242 AEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLG 284 + L+S F CP G S L+PRLFSF++P G C C G G Sbjct: 1222 NRDYLYSTKFHCPRSGKSFDALDPRLFSFHSPLGWCCRCLGNG 1264 Score = 166 bits (420), Expect = 4e-39, Method: Compositional matrix adjust. Identities = 114/346 (32%), Positives = 172/346 (49%), Gaps = 34/346 (9%) Query: 405 PCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIG 464 PC+ CEG R + + + I +M++ A FF + A + K I Sbjct: 758 PCSVCEGKRFQPPILAIRYRGKSIDQIFEMTVKEASLFFCPKQ---DNADPQSVLCKRIV 814 Query: 465 DRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGV---------------- 508 DRL L VGL+YL L LSGGE+QR+++ + +G G Sbjct: 815 DRLGMLSEVGLDYLRLGHPLNQLSGGESQRLKILAILGEKHFGSPADPSPGKMKPGKDRQ 874 Query: 509 -MYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVH 567 + +LDEP+ GLH D +RL+G L L +LGN++IVVEH+ D I ++D VID+GP G Sbjct: 875 RIIILDEPTTGLHMDDVKRLIGLLQKLVELGNSLIVVEHNLDVILSSDWVIDLGPLGGKQ 934 Query: 568 GGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEVP------KKRVPANPEKVLKLTGARGN 621 GG+++A+GP E I A S TG +++ K K + P P ++ L + GAR + Sbjct: 935 GGKIIAQGPPETIAATAGSFTGFFLNEKLKAKSPFLPSSSFYFTPPAKKQTLSIRGARHH 994 Query: 622 NLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQL------NGATIAEPAPYRD 675 NLK ++L + + T +TG+SGSGKSTL D LF ++R+ G + Sbjct: 995 NLKSISLEIDLEKTTVLTGISGSGKSTLAFDVLFAESRRRFLDSLSGYGRQFIQSLEKPQ 1054 Query: 676 IQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFA--GVP 719 + +E I I+Q +S T + + +R LFA G+P Sbjct: 1055 VDDIEGLPPSIAIEQRSTIPGSKSTVGTLSEIHPFLRLLFAKTGIP 1100 Score = 136 bits (342), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 89/234 (38%), Positives = 128/234 (54%), Gaps = 26/234 (11%) Query: 728 PGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYN----RETLEIKYKGK 783 P FSF+ G C C G+G I+ E P I C C+GKR N +L KG Sbjct: 1245 PRLFSFHSPLGWCCRCLGNGKIE-ESEDQPPIL--CPDCQGKRINLGARSVSLPWPLKGS 1301 Query: 784 --TIHEVLDMTIEEAREFFDA---------------VPALARKLQTLMDVGLTYIRLGQS 826 TI + + I ++F + VPA+ ++L+ + ++GL Y+ L + Sbjct: 1302 KPTIDLLCSLPISLLLDYFKSIEPSSSQQKAIVEKIVPAIIKRLKFIEEMGLHYLSLDRE 1361 Query: 827 ATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIV 886 A +LS GE QR+ L +L G LYILDEPT GLH + Q+LLD L +L+ +GNT++ Sbjct: 1362 AQSLSAGELQRLYLCSQLGSNLQG-VLYILDEPTIGLHPTENQKLLDCLEELKSKGNTLL 1420 Query: 887 VIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFL-KPM 939 ++EH+ + +K AD IVDLGP G GGEI+ G + C+ S TAR+L +PM Sbjct: 1421 IVEHDTEAMKRADKIVDLGPGAGVDGGEIIFEGNYSQLLLCKNSTTARYLCRPM 1474 Score = 120 bits (302), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 72/205 (35%), Positives = 107/205 (52%), Gaps = 29/205 (14%) Query: 405 PCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIG 464 PC SCEG R + V + + I M+ A FF+ + EK+ K Sbjct: 1643 PCESCEGKRYNPQTLEVRYKEKSIHDILCMTAAEACSFFSPI----------EKLHKP-- 1690 Query: 465 DRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAG---------------LVGVM 509 L ++GL+YL L + TLSGGEAQRI+LA + A ++ Sbjct: 1691 --FSILCDIGLSYLRLGQPTPTLSGGEAQRIKLAKDLIAMEQKVIQKEFHWGPSRQSKIL 1748 Query: 510 YVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGG 569 Y+L+EP+IGLH D E+ L L +LG+TV+V+EH + I AD+VI++GPGAG GG Sbjct: 1749 YLLEEPTIGLHLADIEKFLHLCQRLVELGHTVVVIEHHPEVIAEADYVIELGPGAGEKGG 1808 Query: 570 EVVAEGPLEAIMAVPESLTGQYMSG 594 +++ +GP E++ S T ++ G Sbjct: 1809 KIIGQGPPESLAKAANSPTAPFLKG 1833 Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 40/136 (29%), Positives = 65/136 (47%), Gaps = 22/136 (16%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 63 +++ G R HNLK++++ IP + +V+ G+SGSGKS+L + ++A ++ +S ++ Sbjct: 1493 LKILGIRVHNLKDLDIEIPLGRFVVICGVSGSGKSTLLREVIFAAVKKLLNKSPKKIQKE 1552 Query: 64 FLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARV-------- 115 S V E L ++Q NPRST T + D +R LFA+ Sbjct: 1553 CWS-----KVIGAEALGDVCFVDQTPIGKNPRSTPLTYLGLFDRIRELFAQTPLSRQRGY 1607 Query: 116 ---------GEPRCPD 122 E RCPD Sbjct: 1608 TKSRFSYNSKEGRCPD 1623 >UniRef50_C0ADS9 Excinuclease ABC, A subunit n=1 Tax=Opitutaceae bacterium TAV2 RepID=C0ADS9_9BACT Length = 1647 Score = 612 bits (1578), Expect = e-173, Method: Compositional matrix adjust. Identities = 381/1015 (37%), Positives = 556/1015 (54%), Gaps = 95/1015 (9%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 63 I +RG R +NLKN +L IP + VVTG+SG+GKSSL FDTL+AEGQRRYVE+ SAY RQ Sbjct: 25 IRLRGVRQNNLKNFDLDIPLGRYTVVTGVSGAGKSSLVFDTLHAEGQRRYVETFSAYTRQ 84 Query: 64 FLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLF---ARVGEPRC 120 FL L++KP VD IE + P+I+IEQ +T RSTVGT+TE+ D+ ++ F AR +P Sbjct: 85 FLELLDKPQVDSIENIRPSIAIEQTNTVKTSRSTVGTMTELTDFFKVWFSHTARCYDPET 144 Query: 121 PDHDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIR---- 176 + QT+ Q + L++ + + K T+ L+NL +QGY R Sbjct: 145 GEQVEDDNPQTIWQKTRAAHAD---ATLVIAFRVTRPEKLSWTEILQNLQAQGYTRVLIS 201 Query: 177 ------------ARIDGEVCDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETA 224 A + D P L Q + V DR + D R E+ ETA Sbjct: 202 TPSGAGVPPATSAAVTAARIDALQPSTL--QPSTFLHVAQDRLAITDAHRSRFLEAVETA 259 Query: 225 LELSGGTA-VVADMDDPKAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGL 283 L G + A+ E +S P G + R P +FSFN+P GACP C G Sbjct: 260 LHFGQGQVHLFAENSGTFHEVGHYSRGLHSPKTGRTFRAATPAMFSFNSPLGACPACRGF 319 Query: 284 GVQQYFDPDRVIQNPELSLAGGAIRGWDRRNFYYFQM-LKSLADHYKFDVEAPWGSLSAN 342 G D I + LS+ GAI+ + + + + L A +K P+ L+ Sbjct: 320 GRVIEIDYRLAIPDQTLSIEDGAIKPFVGQVYSMSREDLIRAARRHKIPTRIPYAQLTEK 379 Query: 343 VHKVVLYGSGKENIEFKYMNDRG-----DTSIRRHPFEGVLHNMERRYKETESSAVREEL 397 + ++ G E++ RG DT + +G + +E T VR L Sbjct: 380 QREFIMLGEP----EYRARKARGEEIDYDTDDLWYGLKGFFNWLE---STTYKMHVRVFL 432 Query: 398 AKFISNRPCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQR----- 452 +++ + C++C G RL+ EA + LP + + + + + A R Sbjct: 433 SRYRAYNLCSACHGARLQPEALCWRWQGRTLPELYQLPVSELLAQLTQGREASPRPPSHV 492 Query: 453 --------------AKIAEKIL-------------KEIGDRLKFLVNVGLNYLTLSRSAE 485 + E L + I RL++L VGL YLTL R+++ Sbjct: 493 VDGNDSRQSLERSSGGLGEASLPGQPSAAPAALALESILSRLRYLRQVGLGYLTLDRTSK 552 Query: 486 TLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVE 545 TLSGGE +R+ L S +G LV ++VLDEPS+GLH RD +RL+ + L D GNTV+VVE Sbjct: 553 TLSGGEVERVNLTSCLGTSLVDTLFVLDEPSVGLHPRDIDRLIAIIRTLTDAGNTVVVVE 612 Query: 546 HDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEVPKKRV 605 HDE IRAADHVI+IGP G GG VV +G +E ++A ++LTG+Y+S + +IE P R Sbjct: 613 HDESMIRAADHVIEIGPEPGARGGHVVFQGSVEKLLA-SDALTGRYLSNRLRIETPTTRR 671 Query: 606 P--ANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFP--IAQRQ 661 P + P L +TG +NL+D+T+ LP+ ++GVSGSGKSTL+++ + +A+R Sbjct: 672 PCASPPPPFLTITGVTKHNLRDLTVKLPLRRLVALSGVSGSGKSTLLDNVIHQGLLAKRH 731 Query: 662 LNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPES 721 +PA + G + +++ +DQSP+ RTPRSN A YT + +R+L+A P + Sbjct: 732 ---QLTEDPAAIATLTGDDAIGEIVLVDQSPLSRTPRSNAALYTDAWELIRDLYAREPTA 788 Query: 722 RARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKYK 781 +A GYT FSFN GRCE CQG G +VEM FL D++VPC C+G+R+ E L I+++ Sbjct: 789 QAAGYTSSSFSFNAGDGRCEHCQGLGFERVEMQFLSDVFVPCPICEGRRFKPEVLAIRWR 848 Query: 782 GKTIHEVLDMTIEEAREFFDAVPA-----------LARKLQTLMDVGLTYIRLGQSATTL 830 G ++ ++L+ +++A F A A + +LQ L DVGL Y+ LGQ TL Sbjct: 849 GHSVADLLNTPVDDALALFAAAAADDAPNAKTHEKIHARLQPLADVGLGYLTLGQPLNTL 908 Query: 831 SGGEAQRVKLAREL-SKRGTGQT----LYILDEPTTGLHFADIQQLLDVLHKLRDQGNTI 885 SGGE+QR+KL R L + G QT L +LDEPTTGLH D+++L+ VL +L D G+++ Sbjct: 909 SGGESQRLKLVRHLGNASGAAQTPTGALLLLDEPTTGLHRHDVKRLVGVLQRLVDAGHSV 968 Query: 886 VVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLKPML 940 +VIEHNLDV+K+ADW++++GPE GS GG I+ G PE +A+ + + TA +L+ L Sbjct: 969 IVIEHNLDVLKSADWLIEIGPEAGSDGGRIVAEGPPERIAQTDTA-TATYLRAAL 1022 Score = 192 bits (488), Expect = 6e-47, Method: Compositional matrix adjust. Identities = 118/304 (38%), Positives = 166/304 (54%), Gaps = 27/304 (8%) Query: 8 GARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQFLSL 67 GAR +NLKN+ L IP +L VVTG+SGSGKS+LAFD ++AEGQRR++ES+S YARQF+ Sbjct: 1056 GARENNLKNLTLTIPHRQLSVVTGVSGSGKSTLAFDIVFAEGQRRFMESMSPYARQFVEQ 1115 Query: 68 MEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCPDHD--- 124 + +P +D + G+ P ++IEQ+ T + +STV TITE+ YLRLL+AR+G PD D Sbjct: 1116 LPRPAIDRLTGIPPTVAIEQRITRGSRKSTVATITEVAQYLRLLYARLGIQHHPDTDRPV 1175 Query: 125 VPLAAQTVSQMVDNVLSQPEGKR---LMLLAPIIKERKGEHTKTLENLASQGYIRARIDG 181 PL+ + +++ + L+ P +R L L AP+++ RKG H + Q Y R DG Sbjct: 1176 QPLSPGQLKKLLADTLATPAARRAKHLYLCAPLVRGRKGHHQPIATWIGKQNYELMRADG 1235 Query: 182 EVCDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAES----------------FETAL 225 + KL+ K+H IE VV K+ + S AL Sbjct: 1236 RILLTDTFQKLDRYKEHDIEAVVADLKLATLANPKNQNSKSQNKNLPPAAAASAALTRAL 1295 Query: 226 ELSGGT---AVVADMDDPKAEELL--FSANFACPICGYSMRELEPRLFSFNNPAGACPTC 280 EL G+ A+ A ++L FS G S EL+P+ FS N+P G CP C Sbjct: 1296 ELGKGSCFLAIPATSSATGGSKILSWFSTTRTDIETGESFPELDPKHFSHNSPRGWCPAC 1355 Query: 281 DGLG 284 G G Sbjct: 1356 RGHG 1359 Score = 184 bits (467), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 102/216 (47%), Positives = 133/216 (61%), Gaps = 27/216 (12%) Query: 405 PCASCEGTRLRREARHVYVENTPLPA-ISDMSIGHAM----------------------- 440 PC +C G RL R AR V + T A I +G +M Sbjct: 1402 PCPACHGDRLNRIARAVKLHFTTAAAGIPTFDVGRSMLNVRRSAHRAALSLPQLLRATPA 1461 Query: 441 ---EFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRL 497 + LKL + +I + I+ +I +RL+FL +VGL YLTL R TLSGGEAQRIRL Sbjct: 1462 QLLKNLTQLKLDERGRRITQDIVPQIEERLRFLDHVGLGYLTLDRPTGTLSGGEAQRIRL 1521 Query: 498 ASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHV 557 ASQ+G L GV+YVLDEPSIGLH RDN+RL+ TL +LRD GNT++VVEHD++ + ADH+ Sbjct: 1522 ASQLGTNLAGVLYVLDEPSIGLHARDNDRLIETLKNLRDKGNTLLVVEHDDELMDHADHI 1581 Query: 558 IDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMS 593 ID+GP AG+HGGE++AEG I SLTG +++ Sbjct: 1582 IDLGPAAGIHGGELLAEGTPADIKKNARSLTGLFLA 1617 Score = 165 bits (417), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 126/353 (35%), Positives = 178/353 (50%), Gaps = 47/353 (13%) Query: 399 KFISNR--PCASCEGTRLRREARHVYVE--------NTPLPAISDMSIGHAMEFFNNLKL 448 +F+S+ PC CEG R + E + NTP+ + A + N Sbjct: 821 QFLSDVFVPCPICEGRRFKPEVLAIRWRGHSVADLLNTPVDDALALFAAAAADDAPN--- 877 Query: 449 AGQRAKIAEKILKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGL--- 505 AK EKI RL+ L +VGL YLTL + TLSGGE+QR++L +G Sbjct: 878 ----AKTHEKIHA----RLQPLADVGLGYLTLGQPLNTLSGGESQRLKLVRHLGNASGAA 929 Query: 506 ---VGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGP 562 G + +LDEP+ GLH+ D +RL+G L L D G++VIV+EH+ D +++AD +I+IGP Sbjct: 930 QTPTGALLLLDEPTTGLHRHDVKRLVGVLQRLVDAGHSVIVIEHNLDVLKSADWLIEIGP 989 Query: 563 GAGVHGGEVVAEGPLEAIMAVPESLTGQYMSG--KRKIEVPKKRVPANPEK--------- 611 AG GG +VAEGP E I A ++ T Y+ + + V + P + K Sbjct: 990 EAGSDGGRIVAEGPPERI-AQTDTATATYLRAALEEAVNVARASRPHDDAKRRPPPPPPP 1048 Query: 612 --VLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGAT--- 666 L L GAR NNLK++TLT+P + +TGVSGSGKSTL D +F QR+ + Sbjct: 1049 PAALTLIGARENNLKNLTLTIPHRQLSVVTGVSGSGKSTLAFDIVFAEGQRRFMESMSPY 1108 Query: 667 ---IAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFA 716 E P I L + I+Q + +S AT T V +R L+A Sbjct: 1109 ARQFVEQLPRPAIDRLTGIPPTVAIEQRITRGSRKSTVATITEVAQYLRLLYA 1161 Score = 121 bits (304), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 88/278 (31%), Positives = 120/278 (43%), Gaps = 70/278 (25%) Query: 728 PGRFSFNVRGGRCEACQGDGVIKVEM----------------------------HFLPDI 759 P FS N G C AC+G G I M L D Sbjct: 1340 PKHFSHNSPRGWCPACRGHGRIYPWMLTAETADDDDRNSNDPAAQLRALGLETDDELTDE 1399 Query: 760 YVPCDQCKGKRYNRETLEIKYKGKT----------------------------------- 784 PC C G R NR +K T Sbjct: 1400 GTPCPACHGDRLNRIARAVKLHFTTAAAGIPTFDVGRSMLNVRRSAHRAALSLPQLLRAT 1459 Query: 785 ----IHEVLDMTIEEA--REFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRV 838 + + + ++E R D VP + +L+ L VGL Y+ L + TLSGGEAQR+ Sbjct: 1460 PAQLLKNLTQLKLDERGRRITQDIVPQIEERLRFLDHVGLGYLTLDRPTGTLSGGEAQRI 1519 Query: 839 KLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTA 898 +LA +L G LY+LDEP+ GLH D +L++ L LRD+GNT++V+EH+ +++ A Sbjct: 1520 RLASQLGTNLAG-VLYVLDEPSIGLHARDNDRLIETLKNLRDKGNTLLVVEHDDELMDHA 1578 Query: 899 DWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFL 936 D I+DLGP G GGE+L GTP + + S T FL Sbjct: 1579 DHIIDLGPAAGIHGGELLAEGTPADIKKNARSLTGLFL 1616 >UniRef50_B1ZV20 Excinuclease ABC, A subunit n=5 Tax=Bacteria RepID=B1ZV20_OPITP Length = 1995 Score = 609 bits (1570), Expect = e-172, Method: Compositional matrix adjust. Identities = 373/1004 (37%), Positives = 535/1004 (53%), Gaps = 88/1004 (8%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 63 I +RG R +NLK +L +P + I VTGLSG+GKSSL FDTL+AEGQRRYVE+ SAY RQ Sbjct: 15 IRLRGVRQNNLKGFDLDVPLGRYIAVTGLSGAGKSSLVFDTLHAEGQRRYVETFSAYTRQ 74 Query: 64 FLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCPDH 123 FL L+ KP VD IE + P+I+IEQ +T RSTVGT+TE+ D+ ++ F+ V E P+ Sbjct: 75 FLDLLNKPKVDSIENIRPSIAIEQTNTVKTSRSTVGTMTELTDFFKVWFSHVAECFDPET 134 Query: 124 DVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARIDGEV 183 + + + + +++ + K + L+NL +Q Y+R + Sbjct: 135 GEKVEDDNPQSIWAKTSAAHPNRAVIVAFKVTKPANLTWPEILQNLKAQSYVRVLLAAAA 194 Query: 184 CDLSDPPKL------------------ELQKKHTIEVVVDRFKVRDDLTQRLAESFETAL 225 +PP+L +L + VV DR + R E+ ETAL Sbjct: 195 AATRNPPQLHRLEDLLSASSDPATIHPQLSGASELFVVQDRITIAAAEKPRFLEAVETAL 254 Query: 226 ELSGGTAVVADMDDPKAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGV 285 G + D AE FS P G + R P LFSFN+P GACP C G G Sbjct: 255 HFGQGQVHLFAADG-FAELGHFSRGLHSPKTGRTFRAATPALFSFNSPLGACPHCRGFGR 313 Query: 286 QQYFDPDRVIQNPELSLAGGAIRGWD-------RRNFYYFQMLKSLADHYKFDVEAPWGS 338 D + + LS+ G I+ W+ +++ Y F K + P+ S Sbjct: 314 VIEIDYRLAVPDQSLSIDQGVIKCWESEIYGESKKDLYVFTKKK------RIPTNVPFAS 367 Query: 339 LSANVHKVVLYGSGKENIEFKYMNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELA 398 L+ V+ G E Y + G T + + GV K T VR LA Sbjct: 368 LTPEQRDYVING------EPGYGEENGKTWPQY--WYGVKGFFRWLEKNTYKMHVRVFLA 419 Query: 399 KFISNRPCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEK 458 ++ + PC +C G RL+ EA + LP + + + + +LA + A+ Sbjct: 420 RYRAYNPCPACGGQRLQPEALCWKWQGRTLPDLYQLPVSDLLA-----QLASKAARHGHD 474 Query: 459 ILKE------------IGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLV 506 ++ I RL++L VGL YLTL R + TLSGGE +R+ L S +G LV Sbjct: 475 TARKSDSRSETLAYDSIVTRLRYLEQVGLGYLTLDRQSRTLSGGEVERVNLTSCLGTSLV 534 Query: 507 GVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGV 566 ++VLDEPS+GLH RD +RL+ + L + GNTV+VVEHDE IRAADHVI++GP G Sbjct: 535 DTLFVLDEPSVGLHPRDIDRLIAIIRTLTNAGNTVVVVEHDEAMIRAADHVIEVGPEPGG 594 Query: 567 HGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEVPKKRVP-------ANPE--------- 610 GG +V EG + ++ ES+TG Y SG+ IE P +R P + P+ Sbjct: 595 RGGHIVFEGTVSEMLRSRESVTGAYFSGRETIETPARRRPVSLGARASRPQSANAAAPSS 654 Query: 611 --KVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFP--IAQRQLNGAT 666 + L T +NL +T LP+G F C++GVSGSGKSTL+++ ++ + QR Sbjct: 655 SPQWLTFTDVSKHNLAHLTFRLPLGRFVCLSGVSGSGKSTLLDNVIYQGLLTQRLQLAED 714 Query: 667 IAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESRARGY 726 AE F +++ +DQSP+ +TPRSNPA Y+ + +REL+A P ++ G+ Sbjct: 715 PAEIKAITPAPDTAPFGELVLVDQSPLSKTPRSNPALYSEAWELIRELYARTPAAQEAGF 774 Query: 727 TPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKYKGKTIH 786 FSFN GRCE CQG G +VEM FL D++VPC C G+R+ E L I++ G+++ Sbjct: 775 NSSSFSFNSGEGRCEHCQGLGYERVEMQFLSDVFVPCPICDGRRFKPEVLAIQWNGRSVA 834 Query: 787 EVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSK 846 ++L +I +A F P + R+L L VGL Y+ LGQ TLSGGE+QR+KL R L Sbjct: 835 DLLATSINDALPLFTEHPEIHRRLAALETVGLGYLTLGQPLNTLSGGESQRLKLVRYLGD 894 Query: 847 R----------GTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIK 896 + L +LDEPTTGLH D+++LL VLH L D+G+++VVIEHNLDV+K Sbjct: 895 YTAQEVGSPYPNSAGALLLLDEPTTGLHRHDVKRLLSVLHALVDRGHSVVVIEHNLDVLK 954 Query: 897 TADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLKPML 940 +ADW++++GP+ G+ GG I+ GTPE VA + T+ FL+ L Sbjct: 955 SADWLIEIGPDAGANGGRIVAEGTPEDVAAANTA-TSPFLRAAL 997 Score = 483 bits (1242), Expect = e-134, Method: Compositional matrix adjust. Identities = 273/623 (43%), Positives = 371/623 (59%), Gaps = 86/623 (13%) Query: 402 SNRPCASCEGTRLRREARHVYVE----------------------NTP-----LPAISDM 434 + +PC C G RL R AR V + + P LP + Sbjct: 1367 AGQPCPECHGARLNRIARAVKLHFKAPGRRGRRAPARASQPSALNSQPTYALSLPELLTS 1426 Query: 435 SIGHAMEFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQR 494 + H + L L + I + I+ +I +RL+FL +VGL YL+L R ETLSGGEAQR Sbjct: 1427 TPAHLLAHLRELDLDARGRLITQDIIPQIEERLRFLDHVGLGYLSLERPTETLSGGEAQR 1486 Query: 495 IRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAA 554 IRLA+Q+G+ L GV+YVLDEPSIGLH RDN+RL+ TL LR+ GNT++VVEHD++ + A Sbjct: 1487 IRLAAQLGSNLSGVLYVLDEPSIGLHARDNDRLIETLQSLREKGNTLLVVEHDDELMERA 1546 Query: 555 DHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEVPKK----------- 603 D +ID+GP AGVHGGE++A G I +SLTG ++ K+ I P + Sbjct: 1547 DRIIDLGPAAGVHGGELLANGTPAEIKRSAKSLTGLFL--KKGIAHPLRGEYRPAMWHGR 1604 Query: 604 ------RVPAN-------PEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLI 650 R A P++ L+L GA NLK L LP+G + G SG+GKSTL Sbjct: 1605 LARVATRAKAKLTGGTPVPQQWLELRGALFRNLKGFDLRLPLGRLIMVAGPSGAGKSTLF 1664 Query: 651 NDTL-----FPIAQRQ--LNG----------------ATIAEPAPYRDIQGLEHFDKVID 687 D L F I +++ L G +T++ P+ +++G F +VI+ Sbjct: 1665 RDVLDPAVSFAIKEQKASLTGREFVKATGFVVADSHLSTLSTQLPFAELRGANGFKRVIE 1724 Query: 688 IDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDG 747 +DQSPIG+TPRS PATY G+F +R+ FA +PE++ RGYT RFSFN GGRC C+G G Sbjct: 1725 VDQSPIGKTPRSTPATYLGIFDLIRQFFASLPEAKIRGYTASRFSFNTTGGRCPTCEGAG 1784 Query: 748 VIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALA 807 IK+EM F+PD Y+PCD C G RY E +I +KGK+I EVL +T EEA +FFD LA Sbjct: 1785 RIKLEMAFMPDTYLPCDDCHGLRYGPELADITWKGKSIGEVLQLTFEEAAQFFDFHSQLA 1844 Query: 808 RKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELS-------KRGTGQ---TLYILD 857 + Q ++D GL Y+ LGQS+ TLSGGEAQR+KL ELS +R G+ LY+L+ Sbjct: 1845 QVCQLMVDCGLGYLTLGQSSPTLSGGEAQRLKLVTELSAGLASYRERSRGERPRNLYLLE 1904 Query: 858 EPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILV 917 EPT GLH +D ++L+ VLH L DQG+T++VIEH+LD++ AD+IV+LGP GG GGE+L Sbjct: 1905 EPTIGLHLSDCEKLIRVLHSLVDQGHTVIVIEHHLDLLAEADYIVELGPVGGPDGGELLY 1964 Query: 918 SGTPETVAECEASHTARFLKPML 940 G + + S TA +L+ L Sbjct: 1965 QGELAGLLKVRGSPTAPYLRAKL 1987 Score = 204 bits (520), Expect = 9e-51, Method: Compositional matrix adjust. Identities = 125/299 (41%), Positives = 178/299 (59%), Gaps = 22/299 (7%) Query: 5 EVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQF 64 E+ GAR +NLKN+++ IP +L VVTG+SGSGKS+LAFD ++AEGQRR++ES+S YARQF Sbjct: 1037 EIEGARENNLKNLSVAIPHRQLSVVTGVSGSGKSTLAFDIVFAEGQRRFMESMSPYARQF 1096 Query: 65 LSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCPDHD 124 + + +P VD + G+ P ++IEQ+ T + +STV TITE+ YLRLL+AR+G P+ D Sbjct: 1097 VEQLPRPAVDRLTGIPPTVAIEQRVTRGSRKSTVATITEVAQYLRLLYARLGIQHHPETD 1156 Query: 125 V---PLAAQTVSQMVDNVLSQ-PEGKR---LMLLAPIIKERKGEHTKTLENLASQGYIRA 177 PL+ + ++ VLS+ P+ ++ L L AP+I+ RKG H +A+QGY Sbjct: 1157 QPVEPLSPAQLKSLLSRVLSENPKARKARHLYLCAPLIRGRKGHHQPIATWIANQGYELM 1216 Query: 178 RIDGEVCDLSDPPKLELQKKHTIEVVV---------DRFKVRDDLTQRLAES--FETALE 226 R DG++ + KL+ ++H IEVVV R K + +Q A S AL Sbjct: 1217 RADGQLTRVDAFQKLDRYREHDIEVVVADLKTGSPASRAKSKSSGSQLSAPSSRLSEALR 1276 Query: 227 LSGGTAVVADMDDPKAEEL-LFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLG 284 L G+ + + E L FS G S EL+P+ FSFN+P G CPTC G G Sbjct: 1277 LGKGSCFLL---TERGEILSWFSTTRTDIHTGESFPELDPKHFSFNSPRGWCPTCRGHG 1332 Score = 148 bits (374), Expect = 8e-34, Method: Compositional matrix adjust. Identities = 115/359 (32%), Positives = 173/359 (48%), Gaps = 56/359 (15%) Query: 399 KFISNR--PCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIA 456 +F+S+ PC C+G R + E + + + SI A+ F Sbjct: 802 QFLSDVFVPCPICDGRRFKPEVLAIQWNGRSVADLLATSINDALPLFTEHP--------- 852 Query: 457 EKILKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRL--------ASQIGA---GL 505 EI RL L VGL YLTL + TLSGGE+QR++L A ++G+ Sbjct: 853 -----EIHRRLAALETVGLGYLTLGQPLNTLSGGESQRLKLVRYLGDYTAQEVGSPYPNS 907 Query: 506 VGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAG 565 G + +LDEP+ GLH+ D +RLL L L D G++V+V+EH+ D +++AD +I+IGP AG Sbjct: 908 AGALLLLDEPTTGLHRHDVKRLLSVLHALVDRGHSVVVIEHNLDVLKSADWLIEIGPDAG 967 Query: 566 VHGGEVVAEGPLEAIMAVPESLTGQYM-------SGKRKIEV---------------PKK 603 +GG +VAEG E + A + T ++ SG R E+ P Sbjct: 968 ANGGRIVAEGTPEDVAAA-NTATSPFLRAALEAESGGRTPELKAAESAARNGASALQPST 1026 Query: 604 RVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLN 663 + L++ GAR NNLK++++ +P + +TGVSGSGKSTL D +F QR+ Sbjct: 1027 SNLNSISSSLEIEGARENNLKNLSVAIPHRQLSVVTGVSGSGKSTLAFDIVFAEGQRRFM 1086 Query: 664 GAT------IAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFA 716 + E P + L + I+Q + +S AT T V +R L+A Sbjct: 1087 ESMSPYARQFVEQLPRPAVDRLTGIPPTVAIEQRVTRGSRKSTVATITEVAQYLRLLYA 1145 Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 41/133 (30%), Positives = 62/133 (46%), Gaps = 17/133 (12%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTL-----YAEGQ-------R 51 +E+RGA NLK +L +P +LI+V G SG+GKS+L D L +A + R Sbjct: 1627 LELRGALFRNLKGFDLRLPLGRLIMVAGPSGAGKSTLFRDVLDPAVSFAIKEQKASLTGR 1686 Query: 52 RYVESLS-AYARQFLSLMEK----PDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHD 106 +V++ A LS + ++ G I ++Q PRST T I D Sbjct: 1687 EFVKATGFVVADSHLSTLSTQLPFAELRGANGFKRVIEVDQSPIGKTPRSTPATYLGIFD 1746 Query: 107 YLRLLFARVGEPR 119 +R FA + E + Sbjct: 1747 LIRQFFASLPEAK 1759 >UniRef50_Q1D9R5 UvrABC system, A protein n=2 Tax=Cystobacterineae RepID=Q1D9R5_MYXXD Length = 1767 Score = 606 bits (1562), Expect = e-171, Method: Compositional matrix adjust. Identities = 353/941 (37%), Positives = 520/941 (55%), Gaps = 31/941 (3%) Query: 1 MDKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAY 60 M K + GARTHNLK++++ + + + VTG+SG+GKSSLA DTLYAEGQRR+VES S Y Sbjct: 1 MHKTHLVGARTHNLKDLSVDLSEGEFVCVTGVSGAGKSSLALDTLYAEGQRRFVESFSPY 60 Query: 61 ARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRC 120 ARQFL +E+P +D +E ++ +++++++ + RSTV T+ ++ YL LF R P C Sbjct: 61 ARQFLERLERPPMDALEPVAAGVAVDRRAPVKSSRSTVATLADVEPYLSALFTREAVPVC 120 Query: 121 PDHDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARID 180 V + + + +L P+ L GY R + Sbjct: 121 GTCGVEAVRTDARVAAAAAIREHTDAQAILTFPLRIPDTAAFLDARARLLKDGYHRLMVQ 180 Query: 181 GEVCDL-SDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTA--VVADM 237 GEV +L S P VVVDR K+ + R+ ++ E A + G A V Sbjct: 181 GEVKELESLRPAEATDPAGIARVVVDRVKLTNAQLSRVTQALEDAWNRADGEAHLFVPGQ 240 Query: 238 DDPKAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQN 297 P+ CP C P LFS+ +P GAC C G G D +VI N Sbjct: 241 SVPQR----LRRGLVCPKCAREFEAARPGLFSYQSPVGACAACRGFGRTIGIDWGKVIPN 296 Query: 298 PELSLAGGAIRGWDRRNFYYFQ-MLKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKENI 356 PELSL+ GAIR W ++ + + ML+ + PWG L+ + VL G G Sbjct: 297 PELSLSEGAIRPWSGQSTTWERGMLQRWCKARGIPWDKPWGLLTPEQRESVLEGEGD--- 353 Query: 357 EFKYMNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGTRLRR 416 Y R +R ME R T VR LA++ + C SC G RL Sbjct: 354 ---YDEGRAYPGVR-----AWFRWMEGR---TYKMHVRVLLARYRAYTLCESCGGGRLNA 402 Query: 417 EARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNVGLN 476 +AR V LP+ + + A+ + L+ + ++A + E+ RL++L VGL Sbjct: 403 QARAYRVGGLDLPSWHHLELTDALARLDALRTITGQGELARR---ELAGRLRYLQRVGLG 459 Query: 477 YLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRD 536 YLTL R A TLSGGEAQR+ L + +G L G ++VLDEP++GLH D L + L + Sbjct: 460 YLTLDRPARTLSGGEAQRVSLTAALGTSLTGALFVLDEPTVGLHPGDVPPLTEAIAELAE 519 Query: 537 LGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKR 596 GN +V+EHD IR+A V+++GPGAG GG +V +G EA+ + TG+ ++G Sbjct: 520 RGNIALVIEHDPLVIRSAHRVLELGPGAGKQGGRLVFDGTPEALAKKQDLPTGRLLAGVD 579 Query: 597 KIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFP 656 EVP R P L + GAR +NLKD+T+ +P+G+ +TG SGSGKSTL+++ L+ Sbjct: 580 --EVP--RTPRTRTGALVIRGAREHNLKDLTVEVPLGVLCAVTGPSGSGKSTLMDEVLYR 635 Query: 657 IAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFA 716 R+L + P ++G+E + +DQSP+GRT R N ATYT + +RE FA Sbjct: 636 HLARRLGVKDVEAPGAVDAVEGMEAVKAITLVDQSPLGRTSRGNAATYTKAWDRLRERFA 695 Query: 717 GVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETL 776 P++ RG T FSFNV GRCEAC G+G VEM FL D+ + C C+G+R+ E L Sbjct: 696 SEPDAEVRGLTAAHFSFNVDKGRCEACSGEGYETVEMQFLADVALLCAVCRGRRFKEEVL 755 Query: 777 EIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQ 836 ++++G ++ +VL+MT++E + F AL R L + +GL Y+ LGQ +TLSGGEAQ Sbjct: 756 AVRHQGFSVAQVLEMTVDEVLQHFGGDTALKRTLGPVARLGLGYLPLGQPLSTLSGGEAQ 815 Query: 837 RVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIK 896 R+KLAR L+ G TL+++DEP+ GLH D++ ++ L+ L D G +++V++H++ V+K Sbjct: 816 RLKLARALANEAQG-TLFLIDEPSAGLHAEDVRHVITALNALVDFGASVLVVDHDVAVMK 874 Query: 897 TADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLK 937 +DW++DLGP GG GG ++ GTPE VA + + TA+ L+ Sbjct: 875 ASDWVIDLGPVGGRDGGRLVAEGTPEDVARGKGA-TAQALR 914 Score = 484 bits (1245), Expect = e-135, Method: Compositional matrix adjust. Identities = 256/538 (47%), Positives = 357/538 (66%), Gaps = 8/538 (1%) Query: 405 PCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIG 464 PC +C G+RL R V +E + S+ + K G RA + E +E+ Sbjct: 1222 PCRTCGGSRLAPVPRGVRLEGARYHEVVQQSVASTLTRVRGWKFKGDRALLGEPSRQELL 1281 Query: 465 DRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDN 524 R++FL VGL YL+L R+A TLSGGE QR+RL++Q+GAGL G MYVLDEP+IGLH RD Sbjct: 1282 RRMEFLERVGLGYLSLDRNAATLSGGEMQRLRLSAQLGAGLTGAMYVLDEPTIGLHPRDT 1341 Query: 525 ERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVP 584 RLL L L G+TV+VVEHD D IRAADH++D+GP G GG ++AEGP + ++ Sbjct: 1342 HRLLDNLRALVATGSTVLVVEHDSDTIRAADHLLDLGPTGGRGGGHILAEGPPDVVLE-S 1400 Query: 585 ESLTGQYMSGKRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGS 644 +S T + + + ++ P R A ++ ++L GAR NNLK V L LPVG ++GVSGS Sbjct: 1401 DSPTARALK-ESQVRPPSGRGEA--KQWIELKGARANNLKRVDLRLPVGRLNVVSGVSGS 1457 Query: 645 GKSTLINDTLFPIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATY 704 GKSTLI L+P + +L+ T A+P P+ + G E +V+ +DQSPIGRTPRS PAT+ Sbjct: 1458 GKSTLIRQVLYPALREKLDRVT-AKPGPFTSLHGAEAVKRVLSVDQSPIGRTPRSVPATF 1516 Query: 705 TGVFTPVRELFAGVPESRARGYTPGRFSFN-VRGGRCEACQGDGVIKVEMHFLPDIYVPC 763 G++ +R +FA PE++ +G+TP RFSFN GGRC AC G G I EM FLPD+ PC Sbjct: 1517 LGIWDELRRVFAATPEAKIKGFTPTRFSFNSASGGRCTACDGQGAISHEMSFLPDVVTPC 1576 Query: 764 DQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRL 823 + C G R++ TLE++Y G TI +VL ++ +EA++ F A+P +A L+ L D+G+ Y++L Sbjct: 1577 EACNGARFDAATLEVRYHGLTIGDVLRLSADEAKDVFKALPRVAAPLECLADLGVGYLQL 1636 Query: 824 GQSATTLSGGEAQRVKLARELSKRGTGQ-TLYILDEPTTGLHFADIQQLLDVLHKLRDQG 882 GQ + TLSGGEAQR+KLA EL+ + TLY+LDEPTTGLH D+++L+ + +L D+G Sbjct: 1637 GQGSNTLSGGEAQRLKLAAELTASARHEPTLYVLDEPTTGLHLGDVEKLITFMGRLVDRG 1696 Query: 883 NTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLKPML 940 +T+VVIEH+ VI AD +V+LGP+GG GG I+ GTP VA+ + + T R LK + Sbjct: 1697 DTLVVIEHHPSVIGAADHVVELGPDGGEAGGHIVAEGTPREVAK-QKTPTGRVLKSLF 1753 Score = 228 bits (580), Expect = 1e-57, Method: Compositional matrix adjust. Identities = 122/284 (42%), Positives = 171/284 (60%), Gaps = 12/284 (4%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 63 IEV AR HNL +++ IP K+ VVTG SGSGKSSL FD ++AEGQRR++E+LS YARQ Sbjct: 937 IEVEHAREHNLHDVSCRIPLGKMTVVTGPSGSGKSSLVFDVVFAEGQRRFLETLSPYARQ 996 Query: 64 FLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCPDH 123 FL M +PDV+ I L P++++EQ+++ STV T+TE+ YLRLLFA++GEP CPD Sbjct: 997 FLPSMPRPDVERISSLPPSVALEQRTSRAGATSTVATVTEVAHYLRLLFAKLGEPHCPDD 1056 Query: 124 DVPLAAQTVSQMVDNVLS-QPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARIDGE 182 D P+ + + + + + EG LLAP ++ RKG + A G RA +DG+ Sbjct: 1057 DSPITSLAPDVLFAQLTAMKGEG---TLLAPAVRSRKGTYLDIFAAAARAGISRAIVDGK 1113 Query: 183 VCDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVADMDDPKA 242 + DPP+L ++H I++V+ K L++ + FE AL G V D Sbjct: 1114 LASTDDPPRLAKTREHDIDLVMYEGK----LSKLERDVFEKALGWGQGAVKV----DAGK 1165 Query: 243 EELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQ 286 E L S CP CG ++ EL+PR FSFN G C +C+G G+Q Sbjct: 1166 GETLLSTERTCPKCGTAVPELDPRWFSFNTKQGRCESCEGTGIQ 1209 Score = 148 bits (373), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 106/324 (32%), Positives = 160/324 (49%), Gaps = 24/324 (7%) Query: 406 CASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGD 465 CA C G R + E V + + + +M++ ++ F + LK Sbjct: 742 CAVCRGRRFKEEVLAVRHQGFSVAQVLEMTVDEVLQHFGG-----------DTALKRT-- 788 Query: 466 RLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNE 525 L + +GL YL L + TLSGGEAQR++LA + G ++++DEPS GLH D Sbjct: 789 -LGPVARLGLGYLPLGQPLSTLSGGEAQRLKLARALANEAQGTLFLIDEPSAGLHAEDVR 847 Query: 526 RLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPE 585 ++ L L D G +V+VV+HD ++A+D VID+GP G GG +VAEG E + A + Sbjct: 848 HVITALNALVDFGASVLVVDHDVAVMKASDWVIDLGPVGGRDGGRLVAEGTPEDV-ARGK 906 Query: 586 SLTGQYMSGKRKI--EVPKKRVPANPE-KVLKLTGARGNNLKDVTLTLPVGLFTCITGVS 642 T Q + G+RK K R P E +++ AR +NL DV+ +P+G T +TG S Sbjct: 907 GATAQALRGERKPLGRAVKLRKPGKGEVPAIEVEHAREHNLHDVSCRIPLGKMTVVTGPS 966 Query: 643 GSGKSTLINDTLFPIAQRQL------NGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRT 696 GSGKS+L+ D +F QR+ P D++ + + ++Q Sbjct: 967 GSGKSSLVFDVVFAEGQRRFLETLSPYARQFLPSMPRPDVERISSLPPSVALEQRTSRAG 1026 Query: 697 PRSNPATYTGVFTPVRELFAGVPE 720 S AT T V +R LFA + E Sbjct: 1027 ATSTVATVTEVAHYLRLLFAKLGE 1050 Score = 129 bits (323), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 91/224 (40%), Positives = 124/224 (55%), Gaps = 16/224 (7%) Query: 728 PGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKYKGKTIHE 787 P FSFN + GRCE+C+G G+ PC C G R ++ +G HE Sbjct: 1188 PRWFSFNTKQGRCESCEGTGIQGGAEAMAEGEVAPCRTCGGSRLAPVPRGVRLEGARYHE 1247 Query: 788 VLDM----TIEEAREF-FDAVPA---------LARKLQTLMDVGLTYIRLGQSATTLSGG 833 V+ T+ R + F A L R+++ L VGL Y+ L ++A TLSGG Sbjct: 1248 VVQQSVASTLTRVRGWKFKGDRALLGEPSRQELLRRMEFLERVGLGYLSLDRNAATLSGG 1307 Query: 834 EAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLD 893 E QR++L+ +L TG +Y+LDEPT GLH D +LLD L L G+T++V+EH+ D Sbjct: 1308 EMQRLRLSAQLGAGLTG-AMYVLDEPTIGLHPRDTHRLLDNLRALVATGSTVLVVEHDSD 1366 Query: 894 VIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLK 937 I+ AD ++DLGP GG GGG IL G P+ V E + S TAR LK Sbjct: 1367 TIRAADHLLDLGPTGGRGGGHILAEGPPDVVLESD-SPTARALK 1409 Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 42/116 (36%), Positives = 62/116 (53%), Gaps = 7/116 (6%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 63 IE++GAR +NLK ++L +P +L VV+G+SGSGKS+L LY R ++ ++A Sbjct: 1426 IELKGARANNLKRVDLRLPVGRLNVVSGVSGSGKSTLIRQVLYP-ALREKLDRVTAKPGP 1484 Query: 64 FLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPR 119 F SL V + +S++Q PRS T I D LR +FA E + Sbjct: 1485 FTSLHGAEAVKRV------LSVDQSPIGRTPRSVPATFLGIWDELRRVFAATPEAK 1534 >UniRef50_B5YKV1 Excinuclease ABC, A subunit n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YKV1_THEYD Length = 833 Score = 597 bits (1539), Expect = e-169, Method: Compositional matrix adjust. Identities = 296/536 (55%), Positives = 391/536 (72%), Gaps = 3/536 (0%) Query: 405 PCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIG 464 PC CEGTRLR E+ + + + +S SI F LK + A IAE+ILKEI Sbjct: 299 PCKLCEGTRLREESLAIKINGKNIAELSTFSIDELKNFLYGLKFSSYNAPIAERILKEIF 358 Query: 465 DRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDN 524 ++ FL +G+ YL+L+R + +LSGGEAQRIRLA+Q+G+ L GV+YVLDEPSIGLH RD Sbjct: 359 IKIDFLQKIGVGYLSLNRPSFSLSGGEAQRIRLATQLGSHLSGVLYVLDEPSIGLHPRDC 418 Query: 525 ERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVP 584 +L+ ++ L GNT+IVVEHDE I AD V+++GPG G GG + P + ++ Sbjct: 419 LKLIESMKELSIRGNTLIVVEHDESTIMNADLVVELGPGGGRDGGYLTGVYPPDKLLKSR 478 Query: 585 ESLTGQYMSGKRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGS 644 S+T QY++G KI +P++R +K +K+ GA+ NLK++ + +P+G+F C+TGV+GS Sbjct: 479 NSITAQYLTGSSKISIPEER--RKSQKFIKIIGAQAYNLKNINVEIPLGVFVCVTGVAGS 536 Query: 645 GKSTLINDTLFPIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATY 704 GKSTLI + L+ ++L A + P Y+ I+G+E DKV+ +DQSPIGRT RS PATY Sbjct: 537 GKSTLIFEILYKALVKKLYNANVY-PGNYKAIEGIEQIDKVVCVDQSPIGRTSRSTPATY 595 Query: 705 TGVFTPVRELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCD 764 T V T +RELF+ +P++R RGY+ RFSFN+ GGRCE+CQGDG+ K++MH LPD+YV CD Sbjct: 596 TQVMTEIRELFSLLPDARVRGYSKSRFSFNLLGGRCESCQGDGIKKIKMHLLPDVYVVCD 655 Query: 765 QCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLG 824 CKGKRYN ETL+IKYKGK I EVL MT+ EA EFF AVP L +KLQ + D+GL YI LG Sbjct: 656 NCKGKRYNEETLQIKYKGKNISEVLQMTVSEALEFFSAVPKLNQKLQIMEDIGLGYITLG 715 Query: 825 QSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNT 884 Q ATTLSGGEAQRVKLA+ELSK+ TG+TLYILDEPTTGLH DI++LL++L +L D GNT Sbjct: 716 QPATTLSGGEAQRVKLAKELSKKPTGKTLYILDEPTTGLHMVDIERLLNILQRLVDMGNT 775 Query: 885 IVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLKPML 940 ++VIEH+L++IK AD+I+DLGPEGGS GG ++ GTPE VA S+T +FLK L Sbjct: 776 VIVIEHDLEIIKCADYIIDLGPEGGSSGGYLIAKGTPEEVALNPNSYTGKFLKEKL 831 Score = 290 bits (743), Expect = 1e-76, Method: Compositional matrix adjust. Identities = 136/281 (48%), Positives = 203/281 (72%), Gaps = 3/281 (1%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 63 I ++ AR HNLKNI+L++PR+K+IV+TG SGSGKSSLA DT++AE RRY++SL R Sbjct: 5 IVIKKARQHNLKNIDLILPRNKIIVITGPSGSGKSSLAMDTIFAEAHRRYLQSLPIELRT 64 Query: 64 FLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCPDH 123 ++KPDVD IEGLSP IS++QK+ S +PRSTVGTITEI+DYLRLL+A++G P CP Sbjct: 65 IFDQLQKPDVDFIEGLSPGISVDQKTISKSPRSTVGTITEIYDYLRLLYAKIGIPYCPRC 124 Query: 124 DVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARIDGEV 183 L +Q +++M+D +LS EG ++ +LAP++ E+KGEH + + ++G+IRARIDG + Sbjct: 125 GRRLISQDINKMLDFILSLTEGTKIQILAPVVIEKKGEHKEIFDRAKAEGFIRARIDGNI 184 Query: 184 CDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVADMDDPKAE 243 +L+ L+ +HTIE++VDR V++ ++ + E A++ + T VV +++ + Sbjct: 185 VELTQEFSLKKHVRHTIELIVDRIIVKEKYKNQIKRALELAMKYT-QTVVVNIVNENR-- 241 Query: 244 ELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLG 284 +++FS+ ACP CG S+ +++PRLFSFN+ GACP C GLG Sbjct: 242 DIIFSSVLACPNCGISLPDIDPRLFSFNSKYGACPRCKGLG 282 Score = 122 bits (305), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 81/225 (36%), Positives = 124/225 (55%), Gaps = 17/225 (7%) Query: 728 PGRFSFNVRGGRCEACQGDGVIKVEMHFLPDI--YVPCDQCKGKRYNRETLEIKYKGKTI 785 P FSFN + G C C+G G +E D+ +PC C+G R E+L IK GK I Sbjct: 263 PRLFSFNSKYGACPRCKGLGYENIEEEEEIDVLSLIPCKLCEGTRLREESLAIKINGKNI 322 Query: 786 HEVLDMTIEEAREFFDAV-------PALAR-------KLQTLMDVGLTYIRLGQSATTLS 831 E+ +I+E + F + P R K+ L +G+ Y+ L + + +LS Sbjct: 323 AELSTFSIDELKNFLYGLKFSSYNAPIAERILKEIFIKIDFLQKIGVGYLSLNRPSFSLS 382 Query: 832 GGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHN 891 GGEAQR++LA +L +G LY+LDEP+ GLH D +L++ + +L +GNT++V+EH+ Sbjct: 383 GGEAQRIRLATQLGSHLSG-VLYVLDEPSIGLHPRDCLKLIESMKELSIRGNTLIVVEHD 441 Query: 892 LDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFL 936 I AD +V+LGP GG GG + P+ + + S TA++L Sbjct: 442 ESTIMNADLVVELGPGGGRDGGYLTGVYPPDKLLKSRNSITAQYL 486 Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 41/110 (37%), Positives = 59/110 (53%), Gaps = 8/110 (7%) Query: 618 ARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQ------LNGATIAEPA 671 AR +NLK++ L LP ITG SGSGKS+L DT+F A R+ + TI + Sbjct: 10 ARQHNLKNIDLILPRNKIIVITGPSGSGKSSLAMDTIFAEAHRRYLQSLPIELRTIFDQL 69 Query: 672 PYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFA--GVP 719 D+ +E I +DQ I ++PRS T T ++ +R L+A G+P Sbjct: 70 QKPDVDFIEGLSPGISVDQKTISKSPRSTVGTITEIYDYLRLLYAKIGIP 119 Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 36/116 (31%), Positives = 64/116 (55%), Gaps = 7/116 (6%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 63 I++ GA+ +NLKNIN+ IP + VTG++GSGKS+L F+ LY ++ + + Y Sbjct: 505 IKIIGAQAYNLKNINVEIPLGVFVCVTGVAGSGKSTLIFEILYKALVKKLYNA-NVYPGN 563 Query: 64 FLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPR 119 + + ++ IE + + ++Q RST T T++ +R LF+ + + R Sbjct: 564 YKA------IEGIEQIDKVVCVDQSPIGRTSRSTPATYTQVMTEIRELFSLLPDAR 613 >UniRef50_Q2T972 Excinuclease ABC, subunit A, form 2 n=56 Tax=Bacteria RepID=Q2T972_BURTA Length = 2021 Score = 595 bits (1535), Expect = e-168, Method: Compositional matrix adjust. Identities = 384/1010 (38%), Positives = 554/1010 (54%), Gaps = 109/1010 (10%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 63 I +RGAR HNLK+I+L + ++ VVTG SGSGKSSL FDTLYAEGQRRYVE+ SAYARQ Sbjct: 57 IRIRGARQHNLKHIDLDLRTGEMTVVTGPSGSGKSSLVFDTLYAEGQRRYVETFSAYARQ 116 Query: 64 FLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGE------ 117 FL M++P V+ ++G+ PAI+I+Q + + RSTVGT+TE++D+L+LL+AR E Sbjct: 117 FLDRMDRPQVERVDGVPPAIAIDQTNPVRSSRSTVGTMTELNDHLKLLYARAAELFDRRT 176 Query: 118 PRCPDHDVP--LAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYI 175 R HD P + A +++ ++ R+ + + + + L++ GY Sbjct: 177 ARLVRHDTPETIYADLLAR------TKEHDPRIAITFAVELPETATDDEVEQWLSASGYT 230 Query: 176 RARIDGEVCDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGG----- 230 R + EV + P K+ ++VV DRF++ R E+ E +L+ GG Sbjct: 231 RVQARREVASPTGPRKV-------LDVVADRFRLHQVDKARAIEAIEASLKRGGGRVNVY 283 Query: 231 --TAVVADMDDPKAEELLFSANFACPICGYSMRELEPR--LFSFNNPAGACPTCDGLGVQ 286 V + +D A+ ++ + +R +P+ LFSFN+ GAC C G G Sbjct: 284 VLAQVPENANDAAAQSQVWRYSTGLHDPDSDLRYADPQAALFSFNSAYGACEACRGFGRV 343 Query: 287 QYFDPDRVIQNPELSLAGGAIRGWDRRNFYYFQ-MLKSLADHYKFDVEAPWGSLSANVHK 345 D VI + +L GGAI+ + Q L A + PW L+ + Sbjct: 344 IGVDLGLVIPDARKTLRGGAIKPMQTPAWKECQDDLMRYAAKANIRRDTPWAELTPDEQD 403 Query: 346 VVLYGSGKENIEFKYMNDRGDTSIRRHPFEGVLHNMERRYKETESSA----VREELAKFI 401 V+ GS N +++ + ++R + ES A +R L+K+ Sbjct: 404 WVINGSPDWNGKWQSQ----------------WYGVKRFFGYLESKAYKMHIRVLLSKYR 447 Query: 402 SNRPCASCEGTRLRREA-----------------------RHVYVENTPLPAISDMSIGH 438 S PCA C G RL+ E+ R V L A+ +++ Sbjct: 448 SYTPCAVCGGARLKTESLLWRLGTKANADAVLASADRFMPRGVEWTRAQLEALPGLTVHD 507 Query: 439 AM--------EFFNNLKL-AGQRAKIAEKILKEIGDRLKFLVNVGLNYLTLSRSAETLSG 489 M FF+++ L + + +L E+ RLK+L +VGL YLTL R + TLSG Sbjct: 508 LMLLPIERIRRFFDDVSLPSALLDDALKLLLAEVRTRLKYLCDVGLGYLTLDRQSRTLSG 567 Query: 490 GEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDED 549 GE QRI L + +G L ++VLDEPSIGLH RD R++ + LRD GNT++VVEHD Sbjct: 568 GEVQRINLTTALGTSLTKTLFVLDEPSIGLHPRDLNRIVEAMQRLRDAGNTLVVVEHDPS 627 Query: 550 AIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKI----EVPKKRV 605 + AAD +ID+GPG G GG +V +G I + +LTG+Y+ G++++ ++ V Sbjct: 628 VMLAADRLIDMGPGPGERGGTIVYDGTPGDIRSA-HTLTGEYLGGRKQVAHASHWVRRPV 686 Query: 606 PANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGA 665 A +++ L GA +NL+DVT+ +P+ C+TGVSGSGKSTL+ D L+P R A Sbjct: 687 DARTPRIV-LEGASEHNLRDVTVEIPLQRLVCVTGVSGSGKSTLLQDVLYPAMARHFGKA 745 Query: 666 TIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESRARG 725 T P +R + G E V+ +DQSPIG+T RSNPA+Y G F +R+LFA P + RG Sbjct: 746 T-ESPGAHRGLMGAEQVGDVVFVDQSPIGKTTRSNPASYVGAFDEIRKLFAKAPLALQRG 804 Query: 726 YTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKY----K 781 Y G FSFN GRC C G G +EM FL D+Y+ C C G+RY E L+++ + Sbjct: 805 YGAGTFSFNSGDGRCPTCGGSGFEHIEMQFLSDVYLRCPDCDGRRYRAEILDVRIERGGR 864 Query: 782 GKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLA 841 ++ +VL++T+ EA F A + R LQ ++DVGL Y++LGQ TLSGGEAQR+KLA Sbjct: 865 ALSVADVLELTVSEAAACFAADAEVLRVLQPIVDVGLEYVKLGQPVPTLSGGEAQRLKLA 924 Query: 842 ---RELSKRGTGQ------------TLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIV 886 E +K G G+ L++ DEPTTGLHF DI +L+ KL G++++ Sbjct: 925 GFLAESAKAGNGRRVVTQEARVARARLFMFDEPTTGLHFDDIAKLMRAFGKLLAAGHSLI 984 Query: 887 VIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFL 936 VIEHNLDVI+ ADW++DLGPEGG GGG +L +GTP+ V C SHT L Sbjct: 985 VIEHNLDVIRAADWLIDLGPEGGDGGGLVLCAGTPDDVKACAGSHTGAAL 1034 Score = 518 bits (1335), Expect = e-145, Method: Compositional matrix adjust. Identities = 286/606 (47%), Positives = 378/606 (62%), Gaps = 60/606 (9%) Query: 395 EELAKFISNRPCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAK 454 E+ + + + PC C GTRL AR V + + ++ ++ + + L+LAG+ A+ Sbjct: 1397 EQEPEGVGDEPCPDCGGTRLNPSARAVTFDRHSIVDVAQWTVSDTRRWIDGLRLAGRDAQ 1456 Query: 455 IAEKILKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDE 514 IA I+ EIG RL FL VGL YL+L R+A +LSGGEAQRIRLA+Q+G+ L GV YVLDE Sbjct: 1457 IARDIVGEIGSRLAFLEEVGLGYLSLDRAAPSLSGGEAQRIRLAAQLGSNLQGVCYVLDE 1516 Query: 515 PSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAE 574 P+IGLH RDN+ LL L L D GNT++VVEHDED IR ADH+IDIGPGAG GG +VA+ Sbjct: 1517 PTIGLHPRDNQILLDALRKLGDKGNTLVVVEHDEDTIRRADHIIDIGPGAGKRGGALVAQ 1576 Query: 575 GPLEAIMAVPESLTGQYMSG--------KRKIEVPKKRV-PANPEKVLKLTGARGNNLKD 625 G + + A P S+TG+ ++ +R + P KR PA P+ L + GA +NL+ Sbjct: 1577 GGVADLSAQPASVTGRLLAQPMTHPLQPRRSVNPPGKRNGPAVPQTWLTVHGALLHNLRG 1636 Query: 626 VTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAEPAPYR----------- 674 VT+ +P+ +TGVSGSGKSTL D L + + ++ PA R Sbjct: 1637 VTVGIPLARLVAVTGVSGSGKSTLARDVLMTNLLDAVGRSVLSSPATRRARKAAQQQAPQ 1696 Query: 675 -------------------------------DIQGLEHFDKVIDIDQSPIGRTPRSNPAT 703 I G E D+V+++DQ+PIG+TPRS PAT Sbjct: 1697 AAQVTKGRASVLARSAPRPALNVTHAWQGCESISGWEQIDRVLEVDQTPIGKTPRSCPAT 1756 Query: 704 YTGVFTPVRELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPC 763 Y GV+ +R LFA E+RARGYT RFSFN GRC AC+G GV + M FLPD+ VPC Sbjct: 1757 YIGVWDTIRRLFADTLEARARGYTASRFSFNTGEGRCPACEGQGVRTIGMSFLPDVKVPC 1816 Query: 764 DQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRL 823 D C G+R+N ETL + ++G+ I +VL M I+EA EFF + +A LQ + DVGL Y+ L Sbjct: 1817 DVCHGQRFNPETLAVTWRGRNIGDVLTMEIDEAVEFFAPISNIAHPLQLMKDVGLGYLTL 1876 Query: 824 GQSATTLSGGEAQRVKLARELSK-------RG--TGQTLYILDEPTTGLHFADIQQLLDV 874 GQ + TLSGGEAQR+KL ELSK RG TLY+LDEPT GLH AD+ +L+ V Sbjct: 1877 GQPSPTLSGGEAQRIKLVTELSKVRDDITRRGQKAPHTLYVLDEPTVGLHMADVAKLIRV 1936 Query: 875 LHKLRDQGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTAR 934 LH+L D G+++VVIEH+LDVI ADWI+DLGPEGG+GGG I+ + PE + + ASHT R Sbjct: 1937 LHRLVDAGHSVVVIEHDLDVIAEADWIIDLGPEGGAGGGAIVAAAPPEALVKAGASHTGR 1996 Query: 935 FLKPML 940 L+P+L Sbjct: 1997 ALEPVL 2002 Score = 209 bits (533), Expect = 3e-52, Method: Compositional matrix adjust. Identities = 113/297 (38%), Positives = 172/297 (57%), Gaps = 13/297 (4%) Query: 2 DKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYA 61 D + + AR HNLK++++ IP K VVTG+SGSGKS+LAFD L+ EGQRRY+ESL+AYA Sbjct: 1071 DVVRIVNAREHNLKSLDVDIPHGKFNVVTGVSGSGKSTLAFDILFHEGQRRYLESLNAYA 1130 Query: 62 RQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCP 121 R + +P+VD + G+ P ++IEQ+ + +STV T +E+ +LRLL+ ++G C Sbjct: 1131 RSIVQPAGRPEVDAVYGIPPTVAIEQRLSRGGRKSTVATTSEVWHFLRLLYVKLGLQHCI 1190 Query: 122 DHDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARIDG 181 P+ +QTV +V +L G+ + LLAP++ RKG +T + ++G R+DG Sbjct: 1191 HDGAPVTSQTVESIVAQLLRDHRGEHVGLLAPLVVNRKGVYTDLAKWAKARGNTHLRVDG 1250 Query: 182 EVCDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGT---------- 231 E + PKL+ ++HTIE+ V V + L + + LEL G Sbjct: 1251 EFVTVDPWPKLDRFREHTIELPVADLVVSPENEAGLRQRLDETLELGKGVMHLLAPLDGL 1310 Query: 232 --AVVADMDDPKAEEL-LFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGV 285 A+ + + E+ + S ACP+CG S EL+PR+FS+N+ G C TC G G+ Sbjct: 1311 SHAMANRLSTARVGEIKVLSVKRACPVCGTSYPELDPRMFSYNSKHGWCATCVGTGL 1367 Score = 118 bits (295), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 104/352 (29%), Positives = 158/352 (44%), Gaps = 54/352 (15%) Query: 406 CASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGD 465 C C+G R R E V +E G A+ + L+L A E+ Sbjct: 842 CPDCDGRRYRAEILDVRIERG----------GRALSVADVLELTVSEAAACFAADAEVLR 891 Query: 466 RLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLA------SQIGAGLVGV----------M 509 L+ +V+VGL Y+ L + TLSGGEAQR++LA ++ G G V + Sbjct: 892 VLQPIVDVGLEYVKLGQPVPTLSGGEAQRLKLAGFLAESAKAGNGRRVVTQEARVARARL 951 Query: 510 YVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVI----------- 558 ++ DEP+ GLH D +L+ L G+++IV+EH+ D IRAAD +I Sbjct: 952 FMFDEPTTGLHFDDIAKLMRAFGKLLAAGHSLIVIEHNLDVIRAADWLIDLGPEGGDGGG 1011 Query: 559 ---------DIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEVPKKRVPANP 609 D+ AG H G + + M L Q + + + R Sbjct: 1012 LVLCAGTPDDVKACAGSHTGAALLH--YDRAMGAEAELAEQGAPLQAVLSAARARRAIEG 1069 Query: 610 EKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQ----LN-- 663 E V+++ AR +NLK + + +P G F +TGVSGSGKSTL D LF QR+ LN Sbjct: 1070 EDVVRIVNAREHNLKSLDVDIPHGKFNVVTGVSGSGKSTLAFDILFHEGQRRYLESLNAY 1129 Query: 664 GATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELF 715 +I +PA ++ + + I+Q +S AT + V+ +R L+ Sbjct: 1130 ARSIVQPAGRPEVDAVYGIPPTVAIEQRLSRGGRKSTVATTSEVWHFLRLLY 1181 Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 43/120 (35%), Positives = 59/120 (49%), Gaps = 23/120 (19%) Query: 3 KIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYAR 62 +I + GA HNL+++ + IP +L+ VTG+SGSGKS+L D LY A AR Sbjct: 692 RIVLEGASEHNLRDVTVEIPLQRLVCVTGVSGSGKSTLLQDVLY-----------PAMAR 740 Query: 63 QFLSLMEKPDVDH----IEGLSPAISIEQ----KSTSHNPRSTVGTITEIHDYLRLLFAR 114 F E P E + + ++Q K+T NP S VG EI R LFA+ Sbjct: 741 HFGKATESPGAHRGLMGAEQVGDVVFVDQSPIGKTTRSNPASYVGAFDEI----RKLFAK 796 Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 38/116 (32%), Positives = 60/116 (51%), Gaps = 6/116 (5%) Query: 611 KVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAEP 670 ++++ GAR +NLK + L L G T +TG SGSGKS+L+ DTL+ QR+ A Sbjct: 55 NLIRIRGARQHNLKHIDLDLRTGEMTVVTGPSGSGKSSLVFDTLYAEGQRRYVETFSAYA 114 Query: 671 APYRD------IQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPE 720 + D ++ ++ I IDQ+ R+ RS T T + ++ L+A E Sbjct: 115 RQFLDRMDRPQVERVDGVPPAIAIDQTNPVRSSRSTVGTMTELNDHLKLLYARAAE 170 Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust. Identities = 72/296 (24%), Positives = 106/296 (35%), Gaps = 95/296 (32%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLY-----AEGQRRYVESLS 58 + V GA HNL+ + + IP +L+ VTG+SGSGKS+LA D L A G+ + Sbjct: 1624 LTVHGALLHNLRGVTVGIPLARLVAVTGVSGSGKSTLARDVLMTNLLDAVGRSVLSSPAT 1683 Query: 59 AYARQFL---------------SLMEKP------DVDH----------IEGLSPAISIEQ 87 AR+ S++ + +V H E + + ++Q Sbjct: 1684 RRARKAAQQQAPQAAQVTKGRASVLARSAPRPALNVTHAWQGCESISGWEQIDRVLEVDQ 1743 Query: 88 KSTSHNPRSTVGTITEIHDYLRLLFA-----------------RVGEPRC---------- 120 PRS T + D +R LFA GE RC Sbjct: 1744 TPIGKTPRSCPATYIGVWDTIRRLFADTLEARARGYTASRFSFNTGEGRCPACEGQGVRT 1803 Query: 121 ------PDHDVP-------------LAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGE 161 PD VP LA + + +VL+ + + API Sbjct: 1804 IGMSFLPDVKVPCDVCHGQRFNPETLAVTWRGRNIGDVLTMEIDEAVEFFAPI---SNIA 1860 Query: 162 HTKTLENLASQGYIRARIDGEVCDLSDP-PKLELQKKHTIEVVVDRFKVRDDLTQR 216 H L GY+ L P P L + I++V + KVRDD+T+R Sbjct: 1861 HPLQLMKDVGLGYL---------TLGQPSPTLSGGEAQRIKLVTELSKVRDDITRR 1907 >UniRef50_D0LX97 Excinuclease ABC, A subunit n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LX97_HALO1 Length = 1847 Score = 577 bits (1487), Expect = e-163, Method: Compositional matrix adjust. Identities = 363/970 (37%), Positives = 511/970 (52%), Gaps = 58/970 (5%) Query: 1 MDKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAY 60 M IE+RGAR +NL +++L + L+ VTG SG+GKSSLAF TLYAEGQRRYVES SAY Sbjct: 1 MRPIELRGARQNNLCSVDLTLEPGTLVAVTGPSGAGKSSLAFGTLYAEGQRRYVESFSAY 60 Query: 61 ARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRC 120 ARQFL + +P+VD ++ + A+++++ + RSTVGT+TE+ DY + L+A C Sbjct: 61 ARQFLERLARPEVDALDPVPAAVAVDRSAPVRTSRSTVGTMTELCDYAKSLWAHSARLCC 120 Query: 121 PDHDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARID 180 P + ++V+ G R+ + + + L +QGY R Sbjct: 121 PGCGAEVQPDEPGAAAESVIEAHSGARVAVSFAVRASSADALALARDELRAQGYGRVLAG 180 Query: 181 GEVCDLSDPPKLELQKKH----------TIEVVVDRFKVRDDLTQRLAESFETALELSGG 230 G + L + L + V+ DR +RL+ES A+ GG Sbjct: 181 GALAKLDELDDDALAAAAAEDNAHHGGGALAVIADRSTATARNRRRLSESLAAAMHRGGG 240 Query: 231 TAVVA--DMDDPKAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQY 288 A V D + L FS C C R P LFSFN+P GACP+C G G Sbjct: 241 RARVHVFDAEGGLGVTLRFSDRLHCADCERDFRPATPGLFSFNSPIGACPSCRGFGRVIG 300 Query: 289 FDPDRVIQNPELSLAGGAIRGWDRRNFYYFQMLKSLADHYKFDVEAPWGSLSANVHKVVL 348 D +V+ +P LSL+ GAIR W + + + + + LA H K PW SA V ++ Sbjct: 301 IDVRKVLPDPSLSLSAGAIRPWRGKKYAWER--RELARHAK-RAGIPW---SAPVSEL-- 352 Query: 349 YGSGKENIEFKYMNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCAS 408 + ++ + + G+ +T VR LA++ + C + Sbjct: 353 -----SAEQLAWLVEGEPGGYEGGGWWGLRGWFSWLESKTYKLHVRVLLARYRAYDECPA 407 Query: 409 CEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAG------------------ 450 C G RLR EA V + +S+ A +F + Sbjct: 408 CAGARLRPEALWWRVRGLDMAGFLALSVADARQFLLDFDRDDDGDGHGDGAAAGSARARG 467 Query: 451 ------QRAKIAEKILKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAG 504 +R A + E RL L +VGL YLTL R++ TLSGGE QR+ L +GA Sbjct: 468 ARGDGRERDDAAALLRAECLRRLSTLADVGLAYLTLDRASRTLSGGETQRVALTGALGAS 527 Query: 505 LVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGA 564 L G + V+DEPS+GLH D RL + L NTV+VVEHD I+ AD V+++GPGA Sbjct: 528 LAGALIVMDEPSVGLHPHDVGRLAEVVQRLAAADNTVLVVEHDWALIQRADRVVELGPGA 587 Query: 565 GVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEVPKKRVPANPEKVLKLTGARGNNLK 624 G GG VV +G E +++ + + + V ++ P ++L A G+NL+ Sbjct: 588 GREGGRVVFDGAPEELLSSDTATGRAHRGARAAALVRRE-----PSAWIELRAATGHNLR 642 Query: 625 DVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAEPA-PYRDIQGLEHFD 683 V + +P GL TC+TGVSGSGKS+LI TL P L G + EPA P+ + G + Sbjct: 643 GVDVAIPRGLLTCVTGVSGSGKSSLILGTLAPAVIAALGG-EVEEPALPHAALAGADALA 701 Query: 684 KVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESRARGYTPGRFSFNVRGGRCEAC 743 + +DQSP+GRT R NPATY + +R A + ARG + G FSFNV GGRCE+C Sbjct: 702 DAVVVDQSPLGRTARGNPATYVKAWDWIRGALAKTEMAAARGLSAGAFSFNVPGGRCESC 761 Query: 744 QGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAV 803 +G+G VEM FL D+ C C GKR+ LE++Y+GK + ++L+M+++EA F + Sbjct: 762 KGEGAETVEMQFLADVSFSCPDCGGKRFVGPVLEVRYQGKNVVDILEMSVDEALACFSSR 821 Query: 804 PALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGL 863 L R+LQ ++DVGL Y+RLGQ TLSGGEAQR+KLA L++ G L ILDEPT GL Sbjct: 822 -TLTRRLQPVVDVGLGYLRLGQPLNTLSGGEAQRLKLAEALARTKAG-GLVILDEPTAGL 879 Query: 864 HFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPET 923 H D+ L L L +G+T+VV+EH++ + ADWIVDLGP G+ GG I+ SGTPE Sbjct: 880 HAQDVVPLRRSLEALVARGDTVVVVEHDMALAAHADWIVDLGPGAGAHGGTIVASGTPEQ 939 Query: 924 VAECEASHTA 933 VA + S TA Sbjct: 940 VAAAQGSSTA 949 Score = 468 bits (1203), Expect = e-130, Method: Compositional matrix adjust. Identities = 265/544 (48%), Positives = 354/544 (65%), Gaps = 17/544 (3%) Query: 406 CASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGD 465 C C GTRL AR V V + + S+ A +++L G+ A IA L E Sbjct: 1303 CPDCAGTRLSPLARAVTVAGWSIAELFGRSVLEAGRALADMQLDGRDATIAAVPLAEARA 1362 Query: 466 RLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNE 525 RL FL +VG+ YL L R A TLSGGE QR+RLA+Q+G+GL G++YVLDEP+IGLH RD Sbjct: 1363 RLSFLASVGVGYLELDRPAATLSGGETQRVRLAAQLGSGLTGILYVLDEPTIGLHPRDTG 1422 Query: 526 RLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPE 585 LL + L + GN+++VVEHD D IRAAD ++DIGPG G HGG ++A G ++A Sbjct: 1423 VLLDAMRALVERGNSLVVVEHDPDTIRAADFLVDIGPGGGHHGGRLLACGAAAEVLAEDR 1482 Query: 586 SLTGQYMSGKRKIEVP-KKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGS 644 + T + +R VP ++RVP + + L+L GAR +NL+D+ L LP+G +TGVSGS Sbjct: 1483 APTAAAL--RRPPPVPAQRRVPDDAAQ-LELRGARRHNLRDLDLRLPLGCLVAVTGVSGS 1539 Query: 645 GKSTLINDTLFPIAQRQLNGATIAEPA--------PYRDIQGLEHFDKVIDIDQSPIGRT 696 GKSTLI + L + G +A PA YR+++G E + ++IDQSPIGRT Sbjct: 1540 GKSTLIREVLL-----EAVGDALARPARTPPRSQRAYRELRGAEALRRAVEIDQSPIGRT 1594 Query: 697 PRSNPATYTGVFTPVRELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFL 756 RS PATY GV+ +R L A PE+RARGY RFSFN GRC C+G G +K EM FL Sbjct: 1595 SRSVPATYVGVWNHIRALLANTPEARARGYGAARFSFNTAEGRCPTCEGQGRLKAEMAFL 1654 Query: 757 PDIYVPCDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDV 816 PD+ + C+ C G R++ +TL+I ++G+ E+L + I EA E F +V +AR L L ++ Sbjct: 1655 PDVEMDCEACAGMRFDPDTLDITWRGRNAGEILALEIGEAAEVFASVSKVARPLALLDEL 1714 Query: 817 GLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLH 876 GL Y++LGQ ++TLSGGEAQR+KL EL R G TLY++DEPTTGLH D+ +LL +L Sbjct: 1715 GLGYLKLGQPSSTLSGGEAQRLKLVSELGARSPGGTLYVMDEPTTGLHRDDVVRLLALLD 1774 Query: 877 KLRDQGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFL 936 +L ++G+T+VVIEH+ DV+ ADWIVDLGPEGG+ GG +LVSG PE VA C SHT L Sbjct: 1775 RLVERGDTVVVIEHHTDVMLAADWIVDLGPEGGAEGGRVLVSGPPEDVAACAESHTGAVL 1834 Query: 937 KPML 940 L Sbjct: 1835 AAEL 1838 Score = 220 bits (560), Expect = 2e-55, Method: Compositional matrix adjust. Identities = 122/290 (42%), Positives = 176/290 (60%), Gaps = 15/290 (5%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 63 IE+ GAR HNL++++L +PR++L+VVTG SGSGKS+LAFD LYAEGQRRY+E+LS YARQ Sbjct: 999 IEILGAREHNLRDLSLRLPREQLVVVTGPSGSGKSTLAFDVLYAEGQRRYLETLSPYARQ 1058 Query: 64 FLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCPDH 123 ++ + +P VD + G+ P++++EQ+ STV TITE+ YLR+++AR G CPD Sbjct: 1059 YMPQLPRPAVDRVLGVPPSVALEQRVHRGGAGSTVATITEVAHYLRVMYARAGLLHCPDC 1118 Query: 124 DVPLA--AQTVSQMVDNVLSQPEGKR------LMLLAPIIKERKGEHTKTLENLASQGYI 175 +V +A A + L++P+G +++AP+++ RKG H + L G Sbjct: 1119 EVAIAPRAPELLARDLAALARPDGDGDGDGDAWLVMAPVVRGRKGLHRELLARAREDGIE 1178 Query: 176 RARIDGEVCDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVA 235 RARIDG L KL+ ++H +E+V+ D + + A LSGG+ V Sbjct: 1179 RARIDGAFTALRAGMKLDRYREHDVELVIAELPAED---AAMPAALGRAAALSGGSVRVR 1235 Query: 236 DMDDPKAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGV 285 +ELL S ACP CG EL+PR+FSF+ GACP C+G GV Sbjct: 1236 RGQ----QELLLSTQRACPSCGTGFPELDPRMFSFHTRQGACPACEGRGV 1281 Score = 137 bits (346), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 97/283 (34%), Positives = 139/283 (49%), Gaps = 43/283 (15%) Query: 406 CASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGD 465 C C G R V + + I +MS+ A+ F++ + + Sbjct: 781 CPDCGGKRFVGPVLEVRYQGKNVVDILEMSVDEALACFSS---------------RTLTR 825 Query: 466 RLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNE 525 RL+ +V+VGL YL L + TLSGGEAQR++LA + G + +LDEP+ GLH +D Sbjct: 826 RLQPVVDVGLGYLRLGQPLNTLSGGEAQRLKLAEALARTKAGGLVILDEPTAGLHAQDVV 885 Query: 526 RLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPE 585 L +L L G+TV+VVEHD AD ++D+GPGAG HGG +VA G E + A Sbjct: 886 PLRRSLEALVARGDTVVVVEHDMALAAHADWIVDLGPGAGAHGGTIVASGTPEQVAAAQG 945 Query: 586 SLTGQYM-----------------SGKRKIEVPKKRVPANPEKV----------LKLTGA 618 S T ++ +G+ V R A P V +++ GA Sbjct: 946 SSTAPHLAAALAAHSSSTRTKSSPAGRASASVGASRA-AQPGPVWQRAPIAGADIEILGA 1004 Query: 619 RGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQ 661 R +NL+D++L LP +TG SGSGKSTL D L+ QR+ Sbjct: 1005 REHNLRDLSLRLPREQLVVVTGPSGSGKSTLAFDVLYAEGQRR 1047 Score = 120 bits (302), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 93/236 (39%), Positives = 123/236 (52%), Gaps = 29/236 (12%) Query: 728 PGRFSFNVRGGRCEACQGDGVI----------KVEMHFLPDIYVPCDQCKGKRYNRETLE 777 P FSF+ R G C AC+G GVI + P C C G R + Sbjct: 1261 PRMFSFHTRQGACPACEGRGVIEPATRRKRGKRAAAEAPPKT---CPDCAGTRLSPLARA 1317 Query: 778 IKYKGKTIHEVLDMTIEEA-REFFD-----------AVP-ALAR-KLQTLMDVGLTYIRL 823 + G +I E+ ++ EA R D AVP A AR +L L VG+ Y+ L Sbjct: 1318 VTVAGWSIAELFGRSVLEAGRALADMQLDGRDATIAAVPLAEARARLSFLASVGVGYLEL 1377 Query: 824 GQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGN 883 + A TLSGGE QRV+LA +L TG LY+LDEPT GLH D LLD + L ++GN Sbjct: 1378 DRPAATLSGGETQRVRLAAQLGSGLTG-ILYVLDEPTIGLHPRDTGVLLDAMRALVERGN 1436 Query: 884 TIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSG-TPETVAECEASHTARFLKP 938 ++VV+EH+ D I+ AD++VD+GP GG GG +L G E +AE A A +P Sbjct: 1437 SLVVVEHDPDTIRAADFLVDIGPGGGHHGGRLLACGAAAEVLAEDRAPTAAALRRP 1492 Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust. Identities = 40/124 (32%), Positives = 60/124 (48%), Gaps = 17/124 (13%) Query: 3 KIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTL-------YAEGQRRYVE 55 ++E+RGAR HNL++++L +P L+ VTG+SGSGKS+L + L A R Sbjct: 1507 QLELRGARRHNLRDLDLRLPLGCLVAVTGVSGSGKSTLIREVLLEAVGDALARPARTPPR 1566 Query: 56 SLSAYARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARV 115 S AY ++ E L A+ I+Q RS T + +++R L A Sbjct: 1567 SQRAYR----------ELRGAEALRRAVEIDQSPIGRTSRSVPATYVGVWNHIRALLANT 1616 Query: 116 GEPR 119 E R Sbjct: 1617 PEAR 1620 >UniRef50_Q9Z985 UvrABC system protein A n=5 Tax=Chlamydophila RepID=UVRA_CHLPN Length = 1826 Score = 570 bits (1468), Expect = e-160, Method: Compositional matrix adjust. Identities = 344/949 (36%), Positives = 528/949 (55%), Gaps = 49/949 (5%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 63 + V G + NLKN+++ ++++++TG+SGSGKSS+AFDTLYA G++RY+ +L + Sbjct: 6 VYVSGIKVRNLKNVSIHFNSEEIVLLTGVSGSGKSSIAFDTLYAAGRKRYISTLPTFFAT 65 Query: 64 FLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCPDH 123 ++ + P V+ I GLSP I+I+Q SH +TVG+ TE+ +L LLF G+ R P Sbjct: 66 TITTLPNPKVEEIHGLSPTIAIKQNHFSHYSHATVGSTTELFSHLALLFTLEGQARDPKT 125 Query: 124 DVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARIDGEV 183 L + +++ ++ EG ++ +LAP++++ + A QG+ + R +G + Sbjct: 126 KEVLDLYSKEKVLSTIMELSEGVQISILAPLLRK----DIAAIHEYAQQGFTKVRCNGTI 181 Query: 184 CDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALEL-SGGTAVVADMDDPKA 242 + + + ++++V+D ++ RL S TALE G +V++D Sbjct: 182 HPIYSFLTSGIPEDCSVDIVIDTLIKSENNIARLKVSLFTALEFGEGHCSVLSD------ 235 Query: 243 EELL-FSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFD-PDRVIQNPEL 300 EEL+ FS Y+ L +LFS + C C G G+ D P + +N + Sbjct: 236 EELMTFSTKQQIDDVTYT--PLTQQLFSPHALESRCSLCQGSGIFISIDNPLLIDENLSI 293 Query: 301 SLAGGAIRGWDRRNFYYFQMLKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKENIEFKY 360 + G + ++ Y + ++LAD F++E PW LS + + L G + + Sbjct: 294 KENCCSFAG-NCSSYLYHTIYQALADALNFNLETPWKDLSPEIQNIFLRGKNNLVLPVRL 352 Query: 361 MNDR-GDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGTRLRREAR 419 + G ++ + GVL+++ + + T + L+K +S C+ C+GT L A Sbjct: 353 FDQTLGKKNLTYKVWRGVLNDIGDKVRYTTKPS--RYLSKGMSAHSCSLCKGTGLGDYAS 410 Query: 420 HVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLT 479 E MS+ + FF+ +K + ++IL+ + RL FL+++GL YLT Sbjct: 411 VATWEGKTFTEFQQMSLNNWHVFFSKVK---SPSLSIQEILQGLKQRLSFLIDLGLGYLT 467 Query: 480 LSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGN 539 +R+ TLSGGE +R +A +G L G+ Y+LDEPSIGLH +D E+L+G + LRD GN Sbjct: 468 PNRALATLSGGEQERTAIAKHLGGELFGITYILDEPSIGLHPQDTEKLIGVIKKLRDQGN 527 Query: 540 TVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIE 599 TVI+VEH+E I AD +IDIGPGAG+ GGEV+ G E + SLT +Y+ + I Sbjct: 528 TVILVEHEERMISLADRIIDIGPGAGIFGGEVLFNGKPEDFLMNSSSLTAKYLRQELTIP 587 Query: 600 VPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQ 659 +P+ R P L LT A +NLK++++ LP+ +TGVSGSGKS+LIN+TL P + Sbjct: 588 IPESR--EAPTSWLLLTEATIHNLKNLSIRLPLARLIGVTGVSGSGKSSLINNTLVPAIE 645 Query: 660 ---RQLNGATIAEPAPYRDIQGLEHFD-----KVIDIDQSPIGRTPRSNPATYTGVFTPV 711 +Q N + HF+ ++I I + GR+ RS P TY F + Sbjct: 646 SFLKQENPKNL-------------HFEWGCIGRLIHITRDLPGRSQRSIPLTYIKAFDDI 692 Query: 712 RELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRY 771 RELFA P S +G T FSFN G C CQG G + + D +PC +C+GKRY Sbjct: 693 RELFASQPRSLRQGLTKAHFSFNQPQGACIQCQGLGTMTISDD---DTPIPCSECQGKRY 749 Query: 772 NRETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLS 831 + E LEI Y+GK I ++LDMT EA +FF + P + K+ L + L Y+ LG+ +TLS Sbjct: 750 HSEVLEILYEGKNIADILDMTAYEAEKFFISHPKIHEKIHALCSLRLDYLPLGRPLSTLS 809 Query: 832 GGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHN 891 GGE QR+KLA EL QTLY+LDEPTTGLH DIQ L++VL L G+T++VIEHN Sbjct: 810 GGEIQRLKLAHELLFASPKQTLYVLDEPTTGLHTHDIQALIEVLLSLTYLGHTVLVIEHN 869 Query: 892 LDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLKPML 940 + V+K D++++LGPEGG GG +L S TP+ + + TA+ L P + Sbjct: 870 MHVVKVCDYVLELGPEGGDLGGYLLASCTPKDLIQLNTP-TAKALAPYI 917 Score = 322 bits (826), Expect = 4e-86, Method: Compositional matrix adjust. Identities = 263/946 (27%), Positives = 438/946 (46%), Gaps = 78/946 (8%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 63 I ++ A +NLK+I+L +PR+ LI + G SGK SL FD LYA G Y E Y RQ Sbjct: 939 ILIKDAYQNNLKHIDLALPRNSLIAIAGPGASGKHSLVFDILYASGNIAYAELFPPYIRQ 998 Query: 64 -FLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCPD 122 L P V ++GLSP IS+ + S+S+ T+ + + + L LFA +GEP P Sbjct: 999 GLLKETPLPSVGEVKGLSPVISVRKCSSSNRSYHTIASALGLSNGLEKLFAILGEPFSPL 1058 Query: 123 HDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARIDGE 182 + L+ T ++D++L + + + +PI + L+ +G+I+ +G Sbjct: 1059 TEEKLSKTTPQTIIDSLLKSYKDDYVTITSPI--PLGSDLEIFLQEKQKEGFIKLYSEGN 1116 Query: 183 VCDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVADMDDPKA 242 + DL + L L + +V+ KV + L + A LS + + K Sbjct: 1117 LYDLDERLPLNLIEP---AIVIQHTKVSPKNSSSLLSAISVAFSLSSEIWIY--ISQKKQ 1171 Query: 243 EELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPELSL 302 +L +S + G E+ +L S ++P G C TC G G I L Sbjct: 1172 RKLSYSLGWKDKK-GRLYPEITHQLLSSDHPEGRCLTCGGRGE---------ILKISLEE 1221 Query: 303 AGGAIRGWDRRNFYYFQMLKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKENIEFKYMN 362 I + F+ KS Y V+ +A+ +L + KE + F Sbjct: 1222 HKEKIAHYTPLEFFSLFFPKS----YMKPVQKLLKDENASQPLKLL--TTKEFLNFC--- 1272 Query: 363 DRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGTRLRREARHVY 422 RG + P L ME+ E++S ++ LA C +C+G+ L A +V Sbjct: 1273 -RGSSEF---PGMNALL-MEQLDTESDSPLIKPLLAL----TSCPACKGSGLNDYANYVR 1323 Query: 423 VENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTLSR 482 + NT L I F N + R+ I++++ +RL F+ VGL+Y+TL + Sbjct: 1324 INNTSLLDIYQEDATFLESFLNTIGTDDTRS-----IIQDLMNRLTFISKVGLSYITLGQ 1378 Query: 483 SAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVI 542 +TLS GE R+ LA +I L ++Y+ +EP GLH +D ++ L L NTVI Sbjct: 1379 RQDTLSDGENYRLHLAKKISINLTNIVYLFEEPLSGLHPQDLPTIVQLLKELVANNNTVI 1438 Query: 543 VVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEVPK 602 + I ADH I +GPG+G GG ++ +S T S VP+ Sbjct: 1439 ATDRSCSLIPHADHAIFLGPGSGPQGGFLM------------DSDTEVCPSVDLHANVPQ 1486 Query: 603 KRV-PANPEKVLKLTGARGNN-----------LKDVTLTLPVGLFTCITGVSGSGKSTLI 650 V P P + K RG++ ++++ ++ P+ I GVSGSGK++L+ Sbjct: 1487 TEVCPKAPLSISKANHTRGSDRTLKVNLSIHHIQNLKVSAPLHALVAIGGVSGSGKTSLL 1546 Query: 651 NDTLFPIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTP 710 L G + A +G F ++ ID PI + RS+ +TY + Sbjct: 1547 -----------LEG--FKKQAELLIAKGTTTFSDLVVIDSHPIASSQRSDISTYFDIAPS 1593 Query: 711 VRELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKR 770 +R +A + +++A + FS N + G+C CQG G ++ F PC C G R Sbjct: 1594 LRAFYASLTQAKALNISSTMFSTNTKQGQCSDCQGLGYQWIDRAFYALEKRPCPTCSGFR 1653 Query: 771 YNRETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTL 830 E+ Y+GK E+L IE F + + + L+ L+D+GL Y+ +GQ ++L Sbjct: 1654 IQPLAQEVLYEGKHFGELLHTPIETVALRFPFIKKIQKPLKALLDIGLGYLPIGQKLSSL 1713 Query: 831 SGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEH 890 S E +K A L + TL+++DE + L Q L + L L + G++++ I+H Sbjct: 1714 SVSEKTALKTAYFLYQTPETPTLFLIDELFSSLDPIKKQHLPEKLRSLINSGHSVIYIDH 1773 Query: 891 NLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFL 936 ++ ++K+AD+++++GP G GG++L SG+P+ + + S +++ Sbjct: 1774 DVKLLKSADYLIEIGPGSGKQGGKLLFSGSPKDIYASKDSLLKKYI 1819 Score = 133 bits (335), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 89/256 (34%), Positives = 133/256 (51%), Gaps = 19/256 (7%) Query: 405 PCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIG 464 PC+ C+G R E + E + I DM+ A +FF + KI EKI Sbjct: 740 PCSECQGKRYHSEVLEILYEGKNIADILDMTAYEAEKFFIS------HPKIHEKI----- 788 Query: 465 DRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQI-GAGLVGVMYVLDEPSIGLHQRD 523 L ++ L+YL L R TLSGGE QR++LA ++ A +YVLDEP+ GLH D Sbjct: 789 ---HALCSLRLDYLPLGRPLSTLSGGEIQRLKLAHELLFASPKQTLYVLDEPTTGLHTHD 845 Query: 524 NERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAE-GPLEAI-M 581 + L+ L+ L LG+TV+V+EH+ ++ D+V+++GP G GG ++A P + I + Sbjct: 846 IQALIEVLLSLTYLGHTVLVIEHNMHVVKVCDYVLELGPEGGDLGGYLLASCTPKDLIQL 905 Query: 582 AVPES-LTGQYMSGKRKIEVPKKRVPANPEKV-LKLTGARGNNLKDVTLTLPVGLFTCIT 639 P + Y+ G I V K P++P+ + + A NNLK + L LP I Sbjct: 906 NTPTAKALAPYIEGSLDIPVVKSEPPSSPKSCDILIKDAYQNNLKHIDLALPRNSLIAIA 965 Query: 640 GVSGSGKSTLINDTLF 655 G SGK +L+ D L+ Sbjct: 966 GPGASGKHSLVFDILY 981 >UniRef50_A0LIN7 Excinuclease ABC subunit A n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LIN7_SYNFM Length = 874 Score = 555 bits (1430), Expect = e-156, Method: Compositional matrix adjust. Identities = 282/535 (52%), Positives = 386/535 (72%), Gaps = 2/535 (0%) Query: 406 CASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGD 465 C SC G+RL AR ++ + + + +++ +L L+ +A IA++ L+EI Sbjct: 328 CPSCGGSRLNGSARSFFLGGLGIHEACGLQLQAVLDWLADLNLSSSQALIADRPLREIIG 387 Query: 466 RLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNE 525 RL L+ +GL YLTL R+A+TLSGGEAQRIRLA Q+ + L GV+YVLDEPSIGLH RD+ Sbjct: 388 RLNHLLELGLAYLTLDRAADTLSGGEAQRIRLAHQLSSSLSGVLYVLDEPSIGLHPRDHR 447 Query: 526 RLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPE 585 +LL L LRD GN+VIVVEHD I ADHV+D+GPGAG GGEVV G ++ P+ Sbjct: 448 KLLDILFRLRDAGNSVIVVEHDRQTILEADHVVDMGPGAGAGGGEVVFSGTAAQMLEHPD 507 Query: 586 SLTGQYMSGKRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSG 645 SLTG+Y+SG++ I +P +R P L+L GARG+NLK++ + P+G C+TGVSGSG Sbjct: 508 SLTGKYLSGRKVISIPPRRKPFA-RGTLQLRGARGHNLKNIDVDFPLGCLICVTGVSGSG 566 Query: 646 KSTLINDTLFPIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYT 705 KSTL+ TL+ R+L+G+ + AP+ + E K++ IDQSP+G+TPRS PATY+ Sbjct: 567 KSTLVLHTLYRALARRLHGSR-SPVAPFDTLGNAEAVGKILLIDQSPLGKTPRSTPATYS 625 Query: 706 GVFTPVRELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQ 765 G+F +R++F+ VPE+RARGY P RFSFN +GGRCEAC+G+G+ ++EM+FLPD+YV C Sbjct: 626 GLFDHIRQVFSQVPEARARGYRPARFSFNAKGGRCEACKGEGLQRIEMYFLPDVYVTCPV 685 Query: 766 CKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQ 825 C G RY +TL+I +KG +I VLDMT+ EA F+ A+ KL TL++VGL Y+RLGQ Sbjct: 686 CGGTRYGNDTLDILFKGHSIASVLDMTVHEAVVLFENFTAIRAKLDTLIEVGLGYLRLGQ 745 Query: 826 SATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTI 885 A TLSGGEAQRVKLA EL +G G+ LYILDEPTTGLHF DI++LL VL +L D G+T+ Sbjct: 746 PANTLSGGEAQRVKLAAELGVKGIGRALYILDEPTTGLHFEDIERLLHVLQRLVDLGHTV 805 Query: 886 VVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLKPML 940 ++IEH+ DV+KTAD+++DLGPEGG GG ++ +G+PE ++ E+S T R+L+ +L Sbjct: 806 ILIEHHPDVVKTADYVIDLGPEGGEQGGYLIGAGSPEELSTVESSFTGRYLREVL 860 Score = 265 bits (678), Expect = 5e-69, Method: Compositional matrix adjust. Identities = 140/293 (47%), Positives = 186/293 (63%), Gaps = 4/293 (1%) Query: 1 MDKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAY 60 MD+I ++GAR HNLKNI+L +PR++ +V+TG+SGSGKSSLAFDTL++EG+RRYVESLS + Sbjct: 4 MDQIVIKGARGHNLKNIDLELPRNRFVVITGVSGSGKSSLAFDTLFSEGRRRYVESLSTH 63 Query: 61 ARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRC 120 ARQ L + P VD I GLSPAI+IEQK NPRSTVGT+TEI+DYLRLL+AR+ C Sbjct: 64 ARQMLQRLSAPPVDEIRGLSPAIAIEQKGLPRNPRSTVGTLTEINDYLRLLYARLSIAHC 123 Query: 121 PDHDVPLAAQTVSQMVDNVLSQ-PEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARI 179 P P+ A TV QMV VL+ P G RL+++AP+ K L+ L G+ R R+ Sbjct: 124 PSCGHPVRAHTVPQMVQEVLAAWPSGSRLLIVAPLEPVPAKHLPKVLQKLTRDGFARIRM 183 Query: 180 DGEVCDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVADMDD 239 D V +L P L + + +EVVVDR + + +RL +SFE A + G ++ Sbjct: 184 DDVVFELDPLPLLPRRAEFRLEVVVDRIVLDESRARRLTDSFEVAAGIGRGMTGAVRLE- 242 Query: 240 PKAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPD 292 E+ FS C CGY + P LFSF++P G CP C GLG + P+ Sbjct: 243 --GGEMRFSEAHRCVACGYDVPRPTPSLFSFHHPLGTCPECRGLGFLDHTVPE 293 Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 47/116 (40%), Positives = 66/116 (56%), Gaps = 7/116 (6%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 63 +++RGAR HNLKNI++ P LI VTG+SGSGKS+L TLY RR S S A Sbjct: 534 LQLRGARGHNLKNIDVDFPLGCLICVTGVSGSGKSTLVLHTLYRALARRLHGSRSPVA-P 592 Query: 64 FLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPR 119 F +L + E + + I+Q PRST T + + D++R +F++V E R Sbjct: 593 FDTL------GNAEAVGKILLIDQSPLGKTPRSTPATYSGLFDHIRQVFSQVPEAR 642 Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 45/118 (38%), Positives = 63/118 (53%), Gaps = 14/118 (11%) Query: 609 PEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGAT-- 666 P + + GARG+NLK++ L LP F ITGVSGSGKS+L DTLF +R+ + Sbjct: 3 PMDQIVIKGARGHNLKNIDLELPRNRFVVITGVSGSGKSSLAFDTLFSEGRRRYVESLST 62 Query: 667 --------IAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFA 716 ++ P P +I+GL I I+Q + R PRS T T + +R L+A Sbjct: 63 HARQMLQRLSAP-PVDEIRGLS---PAIAIEQKGLPRNPRSTVGTLTEINDYLRLLYA 116 >UniRef50_Q9PK60 UvrABC system protein A n=10 Tax=Chlamydia RepID=UVRA_CHLMU Length = 1787 Score = 554 bits (1428), Expect = e-156, Method: Compositional matrix adjust. Identities = 339/939 (36%), Positives = 512/939 (54%), Gaps = 30/939 (3%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 63 + + G NLKN+ + ++++ TG+SGSGKSSLAF+T+YA G++RY+ +L ++ Sbjct: 5 VRLSGITVRNLKNVTVEFCPREIVLFTGVSGSGKSSLAFNTIYAAGRKRYITTLPSFFAT 64 Query: 64 FLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCPDH 123 + + P V +EGLSP ++++Q + + +TVG+ TEI+ YL LLF+ G+ P Sbjct: 65 RIHSLPDPAVKKVEGLSPTVAVKQNFFAQHVHATVGSTTEINSYLALLFSLDGQAYDPIT 124 Query: 124 DVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARIDGEV 183 PL + +++ + + P+G +L LLAP+ G+ + E L QG+ + IDGE+ Sbjct: 125 LRPLTLYSKEKILAEIAAIPDGTQLTLLAPL---PAGDILRVRECL-RQGFTKILIDGEI 180 Query: 184 CDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVADMDDPKAE 243 + L ++++D T RL S T L++ G + D+ K Sbjct: 181 SPIHK--FLATGVPVPSQLIIDTLIKNASNTPRLKVSLFTTLDIGHGECCL-HFDNQKR- 236 Query: 244 ELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGV-QQYFDPDRVIQNPELSL 302 +FS P + L P LFS ++ CP C G G+ DP + QN + Sbjct: 237 --VFSTQTTLPETQNTYTPLSPDLFSSHSHKDRCPQCHGSGIFVSINDPSIIQQNLSIEK 294 Query: 303 AGGAIRGWDRRNFYYFQMLKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKENIEFKYMN 362 G Y + +SLAD+ F + PW LS + + LYG ++ K + Sbjct: 295 NCCPFAG-SCSILLYKTIYQSLADNLGFSLSTPWQDLSPEIQHIFLYGKEGLSLPVKLFD 353 Query: 363 DR-GDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGTRLRREARHV 421 G T+ ++GVL+ + + + + L K S C C+ T L A Sbjct: 354 GTLGKTTQTHKQWKGVLNEIGEKIRFANKPS--RYLPKGTSYTECPRCQKTGLSDYANAA 411 Query: 422 YVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTLS 481 + MS+ F N L + E++++ + RL L+++GL YL+ Sbjct: 412 KWHGKSFADLQQMSLQELFIFLNQLP---PKDPAIEEVIQGLKARLAMLIDLGLPYLSPE 468 Query: 482 RSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTV 541 RS TLSGGE +R LA +GA L+GV YVLDEPSIGLH +D +L+ + LRD GNT+ Sbjct: 469 RSVNTLSGGEQERTALAKHLGAELMGVTYVLDEPSIGLHPQDTYKLMDVIKKLRDQGNTI 528 Query: 542 IVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEVP 601 ++VEHDE I AD VID+GPGAG+ GGEVV G + +A SLT QY+ +++I +P Sbjct: 529 LLVEHDEQMISLADRVIDVGPGAGIFGGEVVFNGTPKEFLANSHSLTAQYLRQEQQIPIP 588 Query: 602 KKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQ 661 KR + L+ A +NLK++T+++P+G T +TGVSGSGKS+LINDTL P + Sbjct: 589 AKR--QTSLGSITLSRANKHNLKNLTVSIPLGQLTVVTGVSGSGKSSLINDTLVPCVEEF 646 Query: 662 LNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPES 721 + + P +QG +++ I++ GR+ RS TY F +R+LFA P Sbjct: 647 IEQGS----CPNLAVQG--KLSRLVHINRDLPGRSQRSISLTYIKAFDELRQLFAEQPRC 700 Query: 722 RARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKYK 781 + G T FSFN G C C G G I + + C C GKR+ + LEI+YK Sbjct: 701 KPLGLTKSHFSFNTPLGACSECGGLGSITAMDN---QDSITCPSCSGKRFLPQVLEIRYK 757 Query: 782 GKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLA 841 KTI ++L+MT EA FF P++ K+Q L +GL Y+ LG+ +LSGGE QR+KLA Sbjct: 758 NKTIADILEMTAYEAESFFLDQPSIHNKIQALCTLGLQYLPLGRPLYSLSGGEIQRLKLA 817 Query: 842 RELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADWI 901 ELS TLY+LDEPTTGLH D++QL+ VL L DQG+++V+IEHN+ V+K AD++ Sbjct: 818 CELSNPVKHPTLYVLDEPTTGLHTHDVKQLIHVLQSLTDQGHSVVIIEHNMHVVKIADYV 877 Query: 902 VDLGPEGGSGGGEILVSGTPETVAECEASHTARFLKPML 940 ++LGPEGG+ GG ++ S +PE + + + T+ L+P L Sbjct: 878 LELGPEGGNKGGCLIASCSPEELIH-KHTPTSLALRPFL 915 Score = 190 bits (482), Expect = 3e-46, Method: Compositional matrix adjust. Identities = 141/520 (27%), Positives = 244/520 (46%), Gaps = 38/520 (7%) Query: 400 FISNRPCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKI 459 IS PC C+G + + L I + +F +L G+ + I Sbjct: 1294 LISETPCNQCQGNGTYTYEHCTRIHDISLSDIYQSDVPFLKKFLLSL---GKDLPLVSDI 1350 Query: 460 LKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGL 519 + +L+ L VGL+ + L + +LS GE ++ LA +GL V+Y+L++P G+ Sbjct: 1351 FQ----KLELLERVGLSQVILGQEQSSLSDGERYQLLLAKAFSSGLTDVIYLLEDPLAGI 1406 Query: 520 HQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEA 579 H +D LL + L NTV+V + + + ADHVI +GP G +GG ++ Sbjct: 1407 HPKDAPSLLSVIKDLVANHNTVVVTDREGSLSKHADHVIHLGPEPGPNGGYLLETSAFRD 1466 Query: 580 IMAVPESLTGQYMSGKRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCIT 639 + + +S Y+S ++PK V LT A ++ L++P+ + I+ Sbjct: 1467 LQPISQS---TYISD----QIPKLSVSV-------LTSA----IQIDNLSIPLRSLSTIS 1508 Query: 640 GVSGSGKSTLINDTLFPIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRS 699 GVSGSGK+TL+ + ++ +G + E P F ++I +D P + RS Sbjct: 1509 GVSGSGKTTLLLEGIYK------SGCAMLEKDP-------SLFSEIIFLDSHPQPASSRS 1555 Query: 700 NPATYTGVFTPVRELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDI 759 + +TY + +R F+ + +++A + FS N + G+C C G G ++ F Sbjct: 1556 DISTYFDIAPSLRNFFSSLTQAKALNISASMFSPNTKQGQCSDCWGLGYQLIDRAFYAME 1615 Query: 760 YVPCDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLT 819 C C G R E+ Y+GK ++L ++ E + F + + + LQTL+ GL Sbjct: 1616 KRSCPTCGGFRVQPLVQEVVYEGKHFGQLLQSSLNEVAKDFSFLKKVQKPLQTLIANGLG 1675 Query: 820 YIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLR 879 Y+ LGQ+ ++LS E +K+ + L TL++LD T L LL L L Sbjct: 1676 YLPLGQNMSSLSLSEKIAIKITKYLFLPPKHPTLFLLDGVATSLDNQQKYTLLSQLKTLV 1735 Query: 880 DQGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSG 919 G+T+V+IE++ + AD+++ +G + I+ SG Sbjct: 1736 SLGHTVVIIENHPAFSQYADFLIQMGHKTDKTSSRIIFSG 1775 Score = 125 bits (313), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 79/256 (30%), Positives = 135/256 (52%), Gaps = 23/256 (8%) Query: 406 CASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGD 465 C SC G R + + +N + I +M+ A FF + I + Sbjct: 739 CPSCSGKRFLPQVLEIRYKNKTIADILEMTAYEAESFFLDQP--------------SIHN 784 Query: 466 RLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVG-VMYVLDEPSIGLHQRDN 524 +++ L +GL YL L R +LSGGE QR++LA ++ + +YVLDEP+ GLH D Sbjct: 785 KIQALCTLGLQYLPLGRPLYSLSGGEIQRLKLACELSNPVKHPTLYVLDEPTTGLHTHDV 844 Query: 525 ERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMA-- 582 ++L+ L L D G++V+++EH+ ++ AD+V+++GP G GG ++A E ++ Sbjct: 845 KQLIHVLQSLTDQGHSVVIIEHNMHVVKIADYVLELGPEGGNKGGCLIASCSPEELIHKH 904 Query: 583 VPESLTGQYMSGKRKIEVPK----KRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCI 638 P SL + + + E+P ++ P P ++ +T A +NLK + +++P T + Sbjct: 905 TPTSLALRPFLSQHQ-ELPHLPDLRQQPPIPAAII-ITNAHHHNLKHIDVSIPRYALTTV 962 Query: 639 TGVSGSGKSTLINDTL 654 TG S SGK +L+ D L Sbjct: 963 TGPSASGKHSLVFDVL 978 Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 54/121 (44%), Positives = 71/121 (58%), Gaps = 6/121 (4%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 63 I + A HNLK+I++ IPR L VTG S SGK SL FD L+A G Y E Y RQ Sbjct: 937 IIITNAHHHNLKHIDVSIPRYALTTVTGPSASGKHSLVFDVLHAAGNISYAELFPPYIRQ 996 Query: 64 FLSLMEK---PDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRC 120 +L++K P VD + GLSP I+IE K+++ N +V + EI D L LF ++G P Sbjct: 997 --ALIKKTPLPSVDKVIGLSPVIAIE-KNSAKNSSHSVASALEISDMLEELFTQIGRPYS 1053 Query: 121 P 121 P Sbjct: 1054 P 1054 Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 42/120 (35%), Positives = 57/120 (47%), Gaps = 14/120 (11%) Query: 1 MDKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAY 60 + I + A HNLKN+ + IP +L VVTG+SGSGKSSL DTL Sbjct: 595 LGSITLSRANKHNLKNLTVSIPLGQLTVVTGVSGSGKSSLINDTLV------------PC 642 Query: 61 ARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRC 120 +F+ P++ LS + I + + RS T + D LR LFA +PRC Sbjct: 643 VEEFIEQGSCPNLAVQGKLSRLVHINRDLPGRSQRSISLTYIKAFDELRQLFAE--QPRC 700 >UniRef50_Q18CU1 Putative DNA repair protein n=6 Tax=Clostridium difficile RepID=Q18CU1_CLOD6 Length = 1142 Score = 553 bits (1425), Expect = e-155, Method: Compositional matrix adjust. Identities = 276/692 (39%), Positives = 422/692 (60%), Gaps = 15/692 (2%) Query: 253 CPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPELSLAGGA------ 306 CP C ++ F+ N+ GAC C+GLG +P ++++P +S+ GA Sbjct: 458 CPHCQTIFSKINTSTFNANSHTGACHDCNGLGFTYQVNPQLIVKDPTISILDGATYYFGK 517 Query: 307 IRGWDRRNFYYFQMLKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKENIEFKYMNDRGD 366 +RG + L ++A D++ PW L + +LYG+ + EF + + + Sbjct: 518 LRGKKPNGNWMVGELYAIAKDKNIDLDIPWNELPRDFIDAILYGTDDKIYEFSFESKGRE 577 Query: 367 TSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGTRLRREARHVYVENT 426 + IRR P G +++++R ++E SS+ L ++++ PC +C G L EAR ++ Sbjct: 578 SKIRR-PASGAINHIQRLFRE--SSSENNTLHQYMNKIPCNTCGGELLCIEARFTTIKGY 634 Query: 427 PLPAISDMSIGHAMEFFNNL--KLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTLSRSA 484 P ++ M+I + L +L + IL E+ R+ +L+ VGL+Y++ R+A Sbjct: 635 RFPELTKMTIEQLWNWLCELPNQLQKNELSLVNDILTELKIRVSYLLKVGLSYISTDRTA 694 Query: 485 ETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVV 544 TLSGGE QR+RL+SQ+G+ LVG+ Y+LDEPSIGLH RD+ ++ + LRD GNTVIVV Sbjct: 695 PTLSGGELQRVRLSSQLGSELVGLTYILDEPSIGLHPRDHNLIIKMIEELRDKGNTVIVV 754 Query: 545 EHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEVPKKR 604 EHD+D I +AD++ID+GP AG GG ++AEG + I+ P S+TG+Y+S K K Sbjct: 755 EHDKDTILSADYIIDVGPSAGTKGGFIIAEGTTQEIIKNPNSITGKYLSTYNKTGSQNKT 814 Query: 605 VPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNG 664 +P+ K L L G NNLK++ + +P+ ITGVSGSGKS+L+ +L P + +L Sbjct: 815 IPS---KWLSLKGCHANNLKNIDVEIPLNCMCSITGVSGSGKSSLVFHSLLPALEEKLKQ 871 Query: 665 ATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESRAR 724 +I + Y + G + D I +DQ+PIG++ RS PATY +F +R LFA P+++ + Sbjct: 872 KSIPDKN-YTEFTGFDAIDDFILMDQTPIGKSSRSTPATYINIFDEIRSLFAETPQAKQK 930 Query: 725 GYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKYKGKT 784 FSFN + G+C CQG G K+ + ++ D +V C +C+GKRY +E L I+YKGKT Sbjct: 931 LLDESYFSFNSKKGQCPNCQGLGKTKIILQYMADQWVTCSECQGKRYQKEILSIQYKGKT 990 Query: 785 IHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLAREL 844 I ++LDM + EA+ FF + RKL L +VGL Y++LGQ+ LSGGE+QR+KLA+EL Sbjct: 991 IADILDMEVAEAKTFFSDCSDIYRKLSLLDEVGLGYLKLGQNTLGLSGGESQRIKLAKEL 1050 Query: 845 SKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADWIVDL 904 + + LYILDEPTTGLHF DI+ LL KL ++ +++++IEHN +VI+ +DWI+D+ Sbjct: 1051 GTKTKKRMLYILDEPTTGLHFKDIENLLITFRKLVNEQHSLLIIEHNTEVIRASDWIIDI 1110 Query: 905 GPEGGSGGGEILVSGTPETVAECEASHTARFL 936 GP+ G GGEI+ SGTP+ + S T F+ Sbjct: 1111 GPDSGINGGEIVASGTPDEIKINPNSITGHFI 1142 Score = 144 bits (363), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 66/128 (51%), Positives = 95/128 (74%), Gaps = 1/128 (0%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 63 I ++G R +NLK++ + IP++++ V+TG+SGSGKSSLAFDT+Y EG+RRY E+LS A+ Sbjct: 326 IYLKGGRQNNLKDVEVTIPKNQITVITGVSGSGKSSLAFDTIYEEGKRRYFENLSNGAK- 384 Query: 64 FLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCPDH 123 ++KP+ D ++GL+P I+IEQK S NPRSTVGT+T I DYLR+LF +G+ CP Sbjct: 385 LSEQLQKPEFDLLQGLTPTIAIEQKKGSQNPRSTVGTLTSIWDYLRMLFVSIGKSYCPYC 444 Query: 124 DVPLAAQT 131 +PL + Sbjct: 445 KIPLEKKN 452 Score = 76.3 bits (186), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 52/162 (32%), Positives = 72/162 (44%), Gaps = 29/162 (17%) Query: 615 LTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQL-----NGATIAE 669 L G R NNLKDV +T+P T ITGVSGSGKS+L DT++ +R+ NGA ++E Sbjct: 328 LKGGRQNNLKDVEVTIPKNQITVITGVSGSGKSSLAFDTIYEEGKRRYFENLSNGAKLSE 387 Query: 670 PAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPES-------- 721 + L+ I I+Q + PRS T T ++ +R LF + +S Sbjct: 388 QLQKPEFDLLQGLTPTIAIEQKKGSQNPRSTVGTLTSIWDYLRMLFVSIGKSYCPYCKIP 447 Query: 722 -----RARGYTP-----------GRFSFNVRGGRCEACQGDG 747 + Y P F+ N G C C G G Sbjct: 448 LEKKNNTKNYCPHCQTIFSKINTSTFNANSHTGACHDCNGLG 489 Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 36/121 (29%), Positives = 58/121 (47%), Gaps = 17/121 (14%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 63 + ++G +NLKNI++ IP + + +TG+SGSGKSSL F +L + + Sbjct: 820 LSLKGCHANNLKNIDVEIPLNCMCSITGVSGSGKSSLVFHSLLPALEEK----------- 868 Query: 64 FLSLMEKPDVDHIE-----GLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEP 118 L PD ++ E + I ++Q + RST T I D +R LFA + Sbjct: 869 -LKQKSIPDKNYTEFTGFDAIDDFILMDQTPIGKSSRSTPATYINIFDEIRSLFAETPQA 927 Query: 119 R 119 + Sbjct: 928 K 928 >UniRef50_B4V5Y5 Excinuclease ABC subunit A n=1 Tax=Streptomyces sp. Mg1 RepID=B4V5Y5_9ACTO Length = 791 Score = 530 bits (1366), Expect = e-149, Method: Compositional matrix adjust. Identities = 303/703 (43%), Positives = 426/703 (60%), Gaps = 35/703 (4%) Query: 245 LLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPELSLAG 304 +L+S A P L+ FS N AGACP+C G+G D ++ +P+LS+ Sbjct: 115 MLYSRAGAYPA---GAERLDSDAFSPNTAAGACPSCHGIGRIHRTDEQLLVPDPDLSIRQ 171 Query: 305 GAIRGWDRRNFYYFQMLKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKENIEFKYMNDR 364 GAI W + + L+ + + DV+APW L A + +L+ + + + R Sbjct: 172 GAIAAWP--GAWQGKNLRDILEALGHDVDAPWRELPARDREWILFTEEQPVVTVHPV--R 227 Query: 365 GDTSIRRHPFEGVLHNMERR----YKETESSAVREELAKFISNRPCASCEGTRLRREARH 420 I+R P++G + R + +++S+++R KF+++ PC CEG RLR EA Sbjct: 228 EAERIQR-PYQGTYMSAHRHVMRTFADSKSASLRARAEKFLTDSPCPVCEGRRLRPEALA 286 Query: 421 VYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTL 480 V + ++ + + + G+ A++ + L+ R+ + +GL YL+L Sbjct: 287 VTFAGRTIAELAAVPLTELDGVLASAPPGGEAARVLAEDLRA---RIAPVTELGLGYLSL 343 Query: 481 SRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNT 540 R+A +LS GE QR+RLA+Q+ +GL GV+YVLDEPS GLH D E LL L L+ GNT Sbjct: 344 DRTAPSLSAGELQRLRLATQLKSGLFGVVYVLDEPSAGLHPADTEALLTVLDRLKAAGNT 403 Query: 541 VIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEV 600 V VVEHD D +R AD ++D+GP AG HGG V+ GP + V ES T +++ +E Sbjct: 404 VFVVEHDLDVVRHADWLVDVGPLAGEHGGRVLHSGPPAGLADVAESATARHLFAS--LES 461 Query: 601 PKKRVPANPEK-VLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLF-PIA 658 P++ P + ++L+G +NL+ VT P+G+FT +TGVSGSGKSTL+ L +A Sbjct: 462 PERPRPVREARGAVRLSGVDRHNLRGVTAEFPLGVFTAVTGVSGSGKSTLVGQALAGEVA 521 Query: 659 QRQLNGATIAEPA-PYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAG 717 R +AEP P R +++++DQ PIGRTPRSN ATYTG+F VR LF Sbjct: 522 GR------LAEPGFPVR---------RLVEVDQRPIGRTPRSNLATYTGLFDVVRRLFTA 566 Query: 718 VPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLE 777 E+RARG+ GRFSFNV GGRCE CQG+G + VE+ FLP Y PC QC G RYN ETL+ Sbjct: 567 SDEARARGWKAGRFSFNVPGGRCETCQGEGFVSVELLFLPSTYAPCPQCGGARYNAETLQ 626 Query: 778 IKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQR 837 ++Y+G +I EVL +T+E A FF VPA AR L+ L D+GL Y+RLGQ AT LSGGEAQR Sbjct: 627 VRYEGLSIAEVLSLTVEAAAVFFAQVPAAARSLRALEDIGLGYLRLGQPATELSGGEAQR 686 Query: 838 VKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKT 897 +KLA EL + TLY+LDEPTTGLH AD++ LL LH L + G+++VV+EH++DV+ Sbjct: 687 IKLATELQRLRRDHTLYLLDEPTTGLHPADVRVLLRQLHGLVEAGHSVVVVEHDMDVVAG 746 Query: 898 ADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLKPML 940 ADW++DLGP GG+ GG ++ SGTP VA S TA +L L Sbjct: 747 ADWVIDLGPGGGAEGGRVVASGTPSEVARTPGSRTAGYLARAL 789 Score = 132 bits (333), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 61/113 (53%), Positives = 85/113 (75%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 63 + VRGAR HNL+ +++ IPRD L V TG+SGSGKSSLAF TLYAE QRRY ES++ YAR+ Sbjct: 9 VRVRGAREHNLRGVDVDIPRDALTVFTGVSGSGKSSLAFGTLYAEAQRRYFESVAPYARR 68 Query: 64 FLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVG 116 + + P VD + GL PA+S+EQ+ ++ RS+VGT+T + + LR+L++R G Sbjct: 69 LIHQIGAPKVDSVTGLPPAVSLEQRRSTPGSRSSVGTVTLLSNSLRMLYSRAG 121 Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 62/216 (28%), Positives = 93/216 (43%), Gaps = 33/216 (15%) Query: 613 LKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAEPAP 672 +++ GAR +NL+ V + +P T TGVSGSGKS+L TL+ AQR+ AP Sbjct: 9 VRVRGAREHNLRGVDVDIPRDALTVFTGVSGSGKSSLAFGTLYAEAQRRY----FESVAP 64 Query: 673 Y--RDIQ--GLEHFDKV------IDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESR 722 Y R I G D V + ++Q RS+ T T + +R L+ SR Sbjct: 65 YARRLIHQIGAPKVDSVTGLPPAVSLEQRRSTPGSRSSVGTVTLLSNSLRMLY-----SR 119 Query: 723 ARGYTPG-------RFSFNVRGGRCEACQGDGVIKV--EMHFLPDIYVPCDQCKGKRYNR 773 A Y G FS N G C +C G G I E +PD + Q + Sbjct: 120 AGAYPAGAERLDSDAFSPNTAAGACPSCHGIGRIHRTDEQLLVPDPDLSIRQGAIAAWPG 179 Query: 774 ETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARK 809 ++GK + ++L+ + + +PA R+ Sbjct: 180 -----AWQGKNLRDILEALGHDVDAPWRELPARDRE 210 Score = 45.1 bits (105), Expect = 0.014, Method: Compositional matrix adjust. Identities = 32/117 (27%), Positives = 45/117 (38%), Gaps = 19/117 (16%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 63 + + G HNL+ + P VTG+SGSGKS+L L E R E R Sbjct: 475 VRLSGVDRHNLRGVTAEFPLGVFTAVTGVSGSGKSTLVGQALAGEVAGRLAEPGFPVRR- 533 Query: 64 FLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRC 120 + ++Q+ PRS + T T + D +R LF E R Sbjct: 534 ------------------LVEVDQRPIGRTPRSNLATYTGLFDVVRRLFTASDEARA 572 >UniRef50_A1SWH0 Excinuclease ABC, A subunit n=15 Tax=Bacteria RepID=A1SWH0_PSYIN Length = 851 Score = 528 bits (1361), Expect = e-148, Method: Compositional matrix adjust. Identities = 297/705 (42%), Positives = 418/705 (59%), Gaps = 47/705 (6%) Query: 263 LEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPELSLAGGAIRGWDRRNFYYFQMLK 322 LE FS N GACPTC GLG ++ +P LS++ GAI W + + L+ Sbjct: 157 LESDSFSPNTAMGACPTCQGLGTAHTVTEASLVLDPSLSISEGAITAWP--GAWQGKNLR 214 Query: 323 SLADHYKFDVEAPWGSLSANVHKVVLYGSGKENIEFKYMNDRGDTSIRRHPFEG------ 376 + +DV+ W LS +L+ + +E + +R P++G Sbjct: 215 DILSVLGYDVDTAWNQLSRTDRDWILFTEEQPVVEIMPVRER------PRPYKGKFWSAK 268 Query: 377 --VLHNMERRYKETESSAVREELAKFISNRPCASCEGTRLRREARHVYVENTPLPAISDM 434 V+H + +++S++VR+ + K++ + PC C G+ LR EA V + ++ + Sbjct: 269 SYVMHTL----ADSKSASVRKRVLKYVKSGPCLICAGSGLRSEALAVTFNGHTIADLNAL 324 Query: 435 SIGHAMEFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQR 494 + F+ L +A ++ I ++ RL L+++GL YL+L R+ TLS GE QR Sbjct: 325 PLTELRHAFDYLGVAN---TASDTITSDLTRRLDVLLDLGLGYLSLGRATPTLSPGEMQR 381 Query: 495 IRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAA 554 +R+A+Q+ AGL GV+YVLDEPS GLH D E LL L L+ GN+V VVEH+ D +R A Sbjct: 382 LRIATQLRAGLFGVIYVLDEPSAGLHPADAEPLLAVLEELKSSGNSVFVVEHNMDVVRRA 441 Query: 555 DHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEVPKKRVPANPEKVLK 614 D VID+GP AG HGG+V+ GP + VP S+T +++ + +P R +P L Sbjct: 442 DWVIDVGPLAGEHGGKVLYSGPTAGLADVPASITREFLFANER-PIPATRALRDPIGWLG 500 Query: 615 LTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLF------------PIAQRQL 662 LTG +NL+ + P+G+ T +TGVSGSGKSTL++ L PIA Sbjct: 501 LTGITRHNLRGIDAEFPLGVLTAVTGVSGSGKSTLVSQVLAEAVGLHLHPDEDPIAGTAS 560 Query: 663 NGATI------AEPAPY-----RDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPV 711 G+ +EP P + I G E ++++ +DQ PIGRTPRSN ATYTG+F V Sbjct: 561 TGSATGEKDDQSEPKPVEITTVKAITGAEPINRLVRVDQKPIGRTPRSNLATYTGLFDAV 620 Query: 712 RELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRY 771 R FA +PE+R+R ++P RFSFNV GGRCE C G+G + V + FLP Y PC C G RY Sbjct: 621 RTTFAAIPEARSRKFSPSRFSFNVPGGRCETCLGEGFVAVGLLFLPGSYSPCPDCGGSRY 680 Query: 772 NRETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLS 831 N ETLE+ Y+ K I EVL++T++ A F VP+ R L+TL +VGL Y+RLGQ AT LS Sbjct: 681 NPETLEVTYRNKNIAEVLELTVDAAVVFLADVPSALRSLETLSEVGLGYLRLGQPATELS 740 Query: 832 GGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHN 891 GGEAQR+KLA EL + G TLY+LDEPTTGLH AD+ LL L++L D GNT++V+EH+ Sbjct: 741 GGEAQRIKLATELQRARRGHTLYVLDEPTTGLHPADVLLLLTQLNRLVDAGNTVIVVEHD 800 Query: 892 LDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFL 936 +DV+ ADW++D+GP GG GG I+ +GTP TVA AS TA +L Sbjct: 801 MDVVSAADWVIDIGPAGGDKGGHIVAAGTPHTVAVHPASRTAPYL 845 Score = 123 bits (308), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 54/113 (47%), Positives = 85/113 (75%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 63 + VRGAR +NL+N+++ +PRD ++ TG+SGSGKSSLAF T++AE QRR+ ES++ YAR+ Sbjct: 36 VRVRGARENNLQNVDVDLPRDAIVAFTGVSGSGKSSLAFGTIFAEAQRRFFESVAPYARR 95 Query: 64 FLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVG 116 + P VD I GL PA++++Q+ + + RS+VGT+T + + LR+L++R G Sbjct: 96 LIQQGHTPRVDEITGLPPAVALQQRRGTPSSRSSVGTVTTLSNSLRMLYSRTG 148 Score = 120 bits (300), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 78/193 (40%), Positives = 102/193 (52%), Gaps = 15/193 (7%) Query: 402 SNRPCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILK 461 S PC C G+R E V N + + ++++ A+ F ++ A + Sbjct: 668 SYSPCPDCGGSRYNPETLEVTYRNKNIAEVLELTVDAAVVFLADVPSALRS--------- 718 Query: 462 EIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVG-VMYVLDEPSIGLH 520 L+ L VGL YL L + A LSGGEAQRI+LA+++ G +YVLDEP+ GLH Sbjct: 719 -----LETLSEVGLGYLRLGQPATELSGGEAQRIKLATELQRARRGHTLYVLDEPTTGLH 773 Query: 521 QRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAI 580 D LL L L D GNTVIVVEHD D + AAD VIDIGP G GG +VA G + Sbjct: 774 PADVLLLLTQLNRLVDAGNTVIVVEHDMDVVSAADWVIDIGPAGGDKGGHIVAAGTPHTV 833 Query: 581 MAVPESLTGQYMS 593 P S T Y++ Sbjct: 834 AVHPASRTAPYLA 846 Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 50/152 (32%), Positives = 70/152 (46%), Gaps = 26/152 (17%) Query: 613 LKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAEPAP 672 +++ GAR NNL++V + LP TGVSGSGKS+L T+F AQR+ AP Sbjct: 36 VRVRGARENNLQNVDVDLPRDAIVAFTGVSGSGKSSLAFGTIFAEAQRRF----FESVAP 91 Query: 673 Y-RDIQGLEHFDKVIDIDQSPIG-------RTP--RSNPATYTGVFTPVRELFA------ 716 Y R + H +V +I P TP RS+ T T + +R L++ Sbjct: 92 YARRLIQQGHTPRVDEITGLPPAVALQQRRGTPSSRSSVGTVTTLSNSLRMLYSRTGLYP 151 Query: 717 -GVPESRARGYTPGRFSFNVRGGRCEACQGDG 747 G P + ++P N G C CQG G Sbjct: 152 DGAPRLESDSFSP-----NTAMGACPTCQGLG 178 Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust. Identities = 41/130 (31%), Positives = 58/130 (44%), Gaps = 19/130 (14%) Query: 8 GARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYV----ESLSAYARQ 63 G HNL+ I+ P L VTG+SGSGKS+L L AE ++ + ++ A Sbjct: 503 GITRHNLRGIDAEFPLGVLTAVTGVSGSGKSTLVSQVL-AEAVGLHLHPDEDPIAGTAST 561 Query: 64 FLSLMEKPD-----------VDHIEGLSPA---ISIEQKSTSHNPRSTVGTITEIHDYLR 109 + EK D V I G P + ++QK PRS + T T + D +R Sbjct: 562 GSATGEKDDQSEPKPVEITTVKAITGAEPINRLVRVDQKPIGRTPRSNLATYTGLFDAVR 621 Query: 110 LLFARVGEPR 119 FA + E R Sbjct: 622 TTFAAIPEAR 631 >UniRef50_B6A038 Excinuclease ABC, A subunit n=8 Tax=Bacteria RepID=B6A038_RHILW Length = 861 Score = 528 bits (1359), Expect = e-148, Method: Compositional matrix adjust. Identities = 284/715 (39%), Positives = 417/715 (58%), Gaps = 44/715 (6%) Query: 263 LEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPELSLAGGAIRGWDRRNFYYFQMLK 322 LE FS N P GACP C GLG ++ +P L++ A+ W + Q L+ Sbjct: 141 LEAEAFSPNTPEGACPQCHGLGRVHEVTETSMVPDPSLTIRERAVAAWPLA--WGGQNLR 198 Query: 323 SLADHYKFDVEAPWGSLSANVHKVVLYGS---------GKENIEFKYMNDRGDTSIRRHP 373 + DV+ PW L + +L+ G + + + R D Sbjct: 199 DILITLGIDVDKPWRELPEKTRQWILFTDEQPVVPVYPGLSHDQVQRAIKRKDEPSYMGT 258 Query: 374 FEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGTRLRREARHVYVENT------- 426 F ++ + T+S+ +++ A+++ + C CEG RLR+E+ V E Sbjct: 259 FSSARRHVTHSFATTQSAMMKKRAARYMISSACPLCEGKRLRKESLSVTFEGLDYAEINR 318 Query: 427 -PLPAISDMSIGHAMEFFNNLKLA----GQRAKIAEKILKEIGDRLKFLVNVGLNYLTLS 481 P+ A D+ +A LK ++A + ++I ++ RL L+++GL YLTL Sbjct: 319 LPMAAFKDIFSPYANVDAGKLKTMRKEHPEKAMVVQRIAADLCRRLSVLLDLGLGYLTLE 378 Query: 482 RSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTV 541 RS TLS GE QR+RLA+Q+ + L GV+YV+DEPS GLH D E LL L L+ +GN++ Sbjct: 379 RSTPTLSPGELQRLRLATQVVSNLFGVVYVMDEPSAGLHPADTEALLRALDGLKSVGNSL 438 Query: 542 IVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYM-SGKRKIEV 600 VVEH+ D +R AD V+D+GP AG GGEV+ GP E + V S T +++ +G +K Sbjct: 439 FVVEHELDVVRHADWVVDVGPAAGELGGEVLYSGPPEGLRKVERSETARHLFAGAQKFSA 498 Query: 601 PKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQR 660 ++ P+ L+L+G NNL+DV P+G+ T +TG+SGSGKS+L++ L + Sbjct: 499 TRR----APDGWLRLSGITRNNLQDVDCAFPLGVMTTVTGISGSGKSSLVSQVLVELVGE 554 Query: 661 QLNGATI----------AEPAPYRDIQG-----LEHFDKVIDIDQSPIGRTPRSNPATYT 705 L GA++ E P +QG L+ ++I++DQ PIGRTPRSN ATYT Sbjct: 555 AL-GASVRVENDAEGEALEAGPSLPMQGRIEVGLDRIRRLIEVDQKPIGRTPRSNLATYT 613 Query: 706 GVFTPVRELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQ 765 G+F VR LFA E++ R Y GRFSFNV GRC C+G+G + VE+ FLP +Y PC Sbjct: 614 GLFDHVRSLFAATAEAKKRRYDAGRFSFNVAKGRCPRCEGEGFVMVELLFLPSVYAPCPT 673 Query: 766 CKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQ 825 C G RYN ETL+I+Y+GKTI +VL +T+ EA +FFD P++ + L+ L +VGL+Y+RLGQ Sbjct: 674 CHGTRYNPETLKIRYRGKTISQVLSLTVAEAWDFFDNAPSVQKSLEVLTEVGLSYLRLGQ 733 Query: 826 SATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTI 885 AT SGGEAQR+KLA EL + G LY+LDEPTTGLH +D+++L+ L+ L + GNT+ Sbjct: 734 PATEFSGGEAQRIKLATELQRAQKGGALYVLDEPTTGLHPSDVERLVAQLNALVENGNTV 793 Query: 886 VVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLKPML 940 +V++H++ + +DW++D+GP G GG I+ SGTPE +A S TA +LK + Sbjct: 794 IVVDHDMTLAAASDWVIDIGPGAGDAGGRIVASGTPEHIAFARNSRTAPYLKRLF 848 Score = 146 bits (368), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 67/113 (59%), Positives = 89/113 (78%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 63 + VRGAR HNLKN+++ IPRD L+V TG+SGSGKSSLAF TLYAE QRRY+ES+S YAR+ Sbjct: 20 VRVRGAREHNLKNVDVDIPRDALVVFTGVSGSGKSSLAFSTLYAEAQRRYLESVSPYARR 79 Query: 64 FLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVG 116 + M PDVD IEGL PA++++Q+ S RS+VG++T I + LR+L++R G Sbjct: 80 LFTQMSVPDVDQIEGLPPAVALQQQRGSPTTRSSVGSVTTISNLLRMLYSRTG 132 Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 51/170 (30%), Positives = 76/170 (44%), Gaps = 28/170 (16%) Query: 608 NPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATI 667 PE V+++ GAR +NLK+V + +P TGVSGSGKS+L TL+ AQR+ + Sbjct: 15 KPEGVVRVRGAREHNLKNVDVDIPRDALVVFTGVSGSGKSSLAFSTLYAEAQRRY----L 70 Query: 668 AEPAPYR----------DIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELF-- 715 +PY D+ +E + + Q T RS+ + T + +R L+ Sbjct: 71 ESVSPYARRLFTQMSVPDVDQIEGLPPAVALQQQRGSPTTRSSVGSVTTISNLLRMLYSR 130 Query: 716 -----AGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIK--VEMHFLPD 758 AG P A ++P N G C C G G + E +PD Sbjct: 131 TGTYPAGQPHLEAEAFSP-----NTPEGACPQCHGLGRVHEVTETSMVPD 175 Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust. Identities = 40/137 (29%), Positives = 61/137 (44%), Gaps = 24/137 (17%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLY----------------A 47 + + G +NL++++ P + VTG+SGSGKSSL L A Sbjct: 507 LRLSGITRNNLQDVDCAFPLGVMTTVTGISGSGKSSLVSQVLVELVGEALGASVRVENDA 566 Query: 48 EGQRRYVESLSAYARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDY 107 EG E+L A + + +D I L I ++QK PRS + T T + D+ Sbjct: 567 EG-----EALEAGPSLPMQGRIEVGLDRIRRL---IEVDQKPIGRTPRSNLATYTGLFDH 618 Query: 108 LRLLFARVGEPRCPDHD 124 +R LFA E + +D Sbjct: 619 VRSLFAATAEAKKRRYD 635 >UniRef50_Q7UK42 Excinuclease ABC subunit A n=1 Tax=Rhodopirellula baltica RepID=Q7UK42_RHOBA Length = 839 Score = 525 bits (1351), Expect = e-147, Method: Compositional matrix adjust. Identities = 275/548 (50%), Positives = 382/548 (69%), Gaps = 6/548 (1%) Query: 392 AVREELAKFISNRPCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLK--LA 449 AVR + + ++ C++CEG RL+ E+ V + + + A+ M + A + N+ L Sbjct: 294 AVRGDKSHMVT---CSTCEGGRLKAESLAVTIHDVSIDAMCRMPLPDAQSWMENVAKPLD 350 Query: 450 GQRAKIAEKILKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVM 509 + K+A I E+ R+ FL VG++YLTL RSAETLSGGE QR+RLA+ IG+GLVGV Sbjct: 351 ALQQKVAAPIQSEVVRRIDFLRRVGVDYLTLDRSAETLSGGEMQRVRLATSIGSGLVGVC 410 Query: 510 YVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGG 569 YVLDEPSIGLH D+ RLL + L+ GNT+++VEHDED I+AADHVIDIGPGAG HGG Sbjct: 411 YVLDEPSIGLHPADHHRLLAAIKELQTAGNTIVIVEHDEDTIQAADHVIDIGPGAGRHGG 470 Query: 570 EVVAEGPLEAIMAVPESLTGQYMSGKRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLT 629 +V++G + S TG Y+SG+ KI + + R L LTGA NNL++VT Sbjct: 471 RLVSQGTAAEVADDESSPTGAYLSGRSKIGLDRPRRTPRKSHQLTLTGATLNNLQNVTAK 530 Query: 630 LPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDID 689 +P+G ++GVSGSGKS+LI DTL+P +L +P P++ + G +H DK++ ID Sbjct: 531 IPLGCLVGVSGVSGSGKSSLIVDTLYPALAAKLE-LVADQPGPHKRLTGAQHIDKLVPID 589 Query: 690 QSPIGRTPRSNPATYTGVFTPVRELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVI 749 Q+PIGRT RS PATY GV P+R+++A E++ G+ RFSFN GRC+ C+G+G Sbjct: 590 QTPIGRTTRSCPATYAGVMDPIRQVYASTREAKTLGFAANRFSFNSPAGRCDVCKGNGFE 649 Query: 750 KVEMHFLPDIYVPCDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARK 809 ++EM+FL D+ + C +C GKR+NR+TL++++KG TI +VL MTI+ A+EFF+ VP + Sbjct: 650 RIEMNFLSDLLIECSRCGGKRFNRQTLQVRFKGATIADVLGMTIDAAQEFFENVPKVHHL 709 Query: 810 LQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQ 869 L +L+DVGL Y+ LGQS+TTLSGGEAQR+KLA EL++ TG+T Y+LDEPTTGLHFAD+Q Sbjct: 710 LASLVDVGLGYVTLGQSSTTLSGGEAQRIKLATELARPATGKTFYVLDEPTTGLHFADVQ 769 Query: 870 QLLDVLHKLRDQGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEA 929 +LL VL +L + GNT++VIEH D++ DW++DLGP GGS GG ++ G PET+A C Sbjct: 770 RLLVVLDRLVEAGNTVLVIEHQSDLLAACDWLLDLGPGGGSQGGHLIAEGPPETIAACPK 829 Query: 930 SHTARFLK 937 S T +FL+ Sbjct: 830 SATGKFLR 837 Score = 290 bits (743), Expect = 1e-76, Method: Compositional matrix adjust. Identities = 149/282 (52%), Positives = 201/282 (71%), Gaps = 1/282 (0%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 63 I +RGAR HNL+N+++ IPRD + V++G+SGSGKSSLAFDTL+AEGQR+Y++SLS YARQ Sbjct: 10 IRIRGARVHNLRNLDVDIPRDAITVISGVSGSGKSSLAFDTLFAEGQRQYIDSLSTYARQ 69 Query: 64 FLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCPDH 123 +L + +PDVD I+GL+P +SI+QKS SH+ RSTV TITEI+DYLRLL+ARVG P C Sbjct: 70 YLDAIPRPDVDWIDGLAPTLSIDQKSGSHSARSTVATITEIYDYLRLLYARVGVPHCVAC 129 Query: 124 DVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARIDGEV 183 ++ QT ++V + + P+ +L L++P+++ RKG H LE +A G +RAR+DGE+ Sbjct: 130 GSTISTQTPDRIVATLATLPDRTKLTLMSPMVRGRKGAHADVLEQIAGHGLVRARVDGEM 189 Query: 184 CDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGG-TAVVADMDDPKA 242 L D P L ++K HTIE +VDR ++D + RL ES AL L+GG + + D D + Sbjct: 190 YLLEDVPPLAVRKNHTIEAIVDRLIIKDGVDARLDESTRLALRLAGGMCSALIDRGDGEP 249 Query: 243 EELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLG 284 E LFS + C CG S ELEPR FSFN+P GACP C GLG Sbjct: 250 ETKLFSTSMTCLECGESFEELEPRTFSFNSPYGACPACQGLG 291 Score = 137 bits (346), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 83/226 (36%), Positives = 120/226 (53%), Gaps = 19/226 (8%) Query: 728 PGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKYKGKTIHE 787 P FSFN G C ACQG G KV + V C C+G R E+L + +I Sbjct: 272 PRTFSFNSPYGACPACQGLG--KVAVRGDKSHMVTCSTCEGGRLKAESLAVTIHDVSIDA 329 Query: 788 VLDMTIEEAREFFDAVPA----------------LARKLQTLMDVGLTYIRLGQSATTLS 831 + M + +A+ + + V + R++ L VG+ Y+ L +SA TLS Sbjct: 330 MCRMPLPDAQSWMENVAKPLDALQQKVAAPIQSEVVRRIDFLRRVGVDYLTLDRSAETLS 389 Query: 832 GGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHN 891 GGE QRV+LA + G Y+LDEP+ GLH AD +LL + +L+ GNTIV++EH+ Sbjct: 390 GGEMQRVRLATSIGS-GLVGVCYVLDEPSIGLHPADHHRLLAAIKELQTAGNTIVIVEHD 448 Query: 892 LDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLK 937 D I+ AD ++D+GP G GG ++ GT VA+ E+S T +L Sbjct: 449 EDTIQAADHVIDIGPGAGRHGGRLVSQGTAAEVADDESSPTGAYLS 494 Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust. Identities = 45/131 (34%), Positives = 72/131 (54%), Gaps = 8/131 (6%) Query: 605 VPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQL-- 662 + + + ++++ GAR +NL+++ + +P T I+GVSGSGKS+L DTLF QRQ Sbjct: 2 ISPSTDNLIRIRGARVHNLRNLDVDIPRDAITVISGVSGSGKSSLAFDTLFAEGQRQYID 61 Query: 663 NGATIA----EPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFA-- 716 + +T A + P D+ ++ + IDQ + RS AT T ++ +R L+A Sbjct: 62 SLSTYARQYLDAIPRPDVDWIDGLAPTLSIDQKSGSHSARSTVATITEIYDYLRLLYARV 121 Query: 717 GVPESRARGYT 727 GVP A G T Sbjct: 122 GVPHCVACGST 132 >UniRef50_A8MGE0 Excinuclease ABC, A subunit n=1 Tax=Alkaliphilus oremlandii OhILAs RepID=A8MGE0_ALKOO Length = 799 Score = 523 bits (1347), Expect = e-146, Method: Compositional matrix adjust. Identities = 271/676 (40%), Positives = 424/676 (62%), Gaps = 12/676 (1%) Query: 268 FSFNNPAGACPTCDGLGVQQYFDPDRVIQNPELSLAGGAIRGWDR-RNFYYFQMLKSLAD 326 FS+NNP C C G G + D D++I N +L GAI W++ + +Y ++L+ + Sbjct: 129 FSYNNPKVWCEMCRGTGEKYVLDYDKIIDNKNRTLKEGAISYWNQGSDNFYDKLLEKVCM 188 Query: 327 HYKFDVEAPWGSLSANVHKVVLYGSGKENIEFKYMNDRGDTSIRRHPFEGVLHNMERRYK 386 HY D+ P LS + + +L G + +Y N + + + F+GV+ + + + Sbjct: 189 HYDIDMNTPIKDLSDDKLEFLLNGKSDSKFKVRYKNYKKNYRTKEVEFKGVIRELNEKLE 248 Query: 387 ETESSAVREELAKFISNRPCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNL 446 + ++ + + + K+I C C G RL+ E V + + ++ ++ ++ NL Sbjct: 249 DIDTPSTLKSIHKYIKKDKCDGCNGDRLKDEMLEVKINGENISSLESKTVTDLKQWLVNL 308 Query: 447 KLAGQRA--KIAEKILKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAG 504 KI I +E+ R+ L + L YL+L+RS +LSGGE+QRIRLA+Q+ Sbjct: 309 IQITDNTCKKIIYDICEEVIKRITNLEKLQLGYLSLNRSIPSLSGGESQRIRLANQLACN 368 Query: 505 LVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGA 564 L ++YVLDEP++GLH D E + L L+ +GNT+++VEH+ D + +AD++ID+GPG Sbjct: 369 LSSLLYVLDEPTMGLHSNDIENIEIILKDLKQMGNTILLVEHNLDIMLSADYLIDMGPGG 428 Query: 565 GVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEVPKKRVPANPEKVLKLTGARGNNLK 624 G++GGE+V +G + I ESLTG+Y+SG+ KI +P ++ +N ++K A+ NN+K Sbjct: 429 GIYGGEIVGKGSPDEIKNHDESLTGKYLSGELKINIPHRKRDSNASILVK--KAKYNNIK 486 Query: 625 DVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAEPAPYRDIQGLEHFDK 684 +P+ +TGVSG+GKSTL ++ L P R+ N +I G+++ +K Sbjct: 487 GEDFFIPLNNLVVVTGVSGAGKSTLTDNILEPSLTRKKN-------INCEEIIGIQNINK 539 Query: 685 VIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESRARGYTPGRFSFNVRGGRCEACQ 744 VI +DQ+PIGR+P+SN AT+TG+F +R+L++ +R R Y+ FSFN GGRCE+C+ Sbjct: 540 VIKVDQTPIGRSPKSNVATFTGMFDFIRDLYSKTELARKRKYSKSEFSFNTPGGRCESCK 599 Query: 745 GDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAVP 804 GDG +K++M F+ D YV CD+CKGKRY ++ LEI Y GK I +VL+MT+ EA EFF Sbjct: 600 GDGQVKIDMSFMADTYVVCDECKGKRYEKKILEINYNGKNISDVLNMTVLEAHEFFIENK 659 Query: 805 ALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLH 864 +++ L+ L+DVGL YI+LGQ ATT+SGGEAQR+KLA+ LS LYILDEPT GLH Sbjct: 660 SISSILKCLIDVGLEYIKLGQPATTISGGEAQRIKLAKYLSNDSATGNLYILDEPTVGLH 719 Query: 865 FADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETV 924 DI +L+ +L+++ D+GN+IVV+EHN+++IK AD+I+D+GP GG GG+I+ GTPE + Sbjct: 720 LHDINKLIALLNEIVDRGNSIVVVEHNMELIKCADYIIDIGPVGGPNGGKIIDCGTPEHI 779 Query: 925 AECEASHTARFLKPML 940 A + + L+ ++ Sbjct: 780 AANNKASVSNKLRKII 795 Score = 130 bits (327), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 65/116 (56%), Positives = 85/116 (73%) Query: 1 MDKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAY 60 MD I++ AR +NLK+I + IP +K+ VVTG+SGSGKSSL FDT+YAE +R ++ES+S Sbjct: 1 MDNIKIIRARENNLKDIEVEIPVNKITVVTGVSGSGKSSLVFDTIYAESERMFLESISIN 60 Query: 61 ARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVG 116 S + KPDV I L PAI+I QK T+ NPRS VGT+T+I +LRLLF+RVG Sbjct: 61 LESITSKLPKPDVYKISNLLPAIAISQKKTNRNPRSYVGTVTDISRFLRLLFSRVG 116 Score = 90.5 bits (223), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 53/142 (37%), Positives = 76/142 (53%), Gaps = 7/142 (4%) Query: 613 LKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQR------QLNGAT 666 +K+ AR NNLKD+ + +PV T +TGVSGSGKS+L+ DT++ ++R +N + Sbjct: 4 IKIIRARENNLKDIEVEIPVNKITVVTGVSGSGKSSLVFDTIYAESERMFLESISINLES 63 Query: 667 IAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGV-PESRARG 725 I P D+ + + I I Q R PRS T T + +R LF+ V R + Sbjct: 64 ITSKLPKPDVYKISNLLPAIAISQKKTNRNPRSYVGTVTDISRFLRLLFSRVGVGKRNKF 123 Query: 726 YTPGRFSFNVRGGRCEACQGDG 747 YT G FS+N CE C+G G Sbjct: 124 YTEGDFSYNNPKVWCEMCRGTG 145 Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 31/111 (27%), Positives = 59/111 (53%), Gaps = 13/111 (11%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 63 I V+ A+ +N+K + IP + L+VVTG+SG+GKS+L + L R+ Sbjct: 475 ILVKKAKYNNIKGEDFFIPLNNLVVVTGVSGAGKSTLTDNILEPSLTRK----------- 523 Query: 64 FLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFAR 114 + ++ I+ ++ I ++Q +P+S V T T + D++R L+++ Sbjct: 524 --KNINCEEIIGIQNINKVIKVDQTPIGRSPKSNVATFTGMFDFIRDLYSK 572 >UniRef50_D1BHG7 Excinuclease ABC, A subunit n=1 Tax=Sanguibacter keddieii DSM 10542 RepID=D1BHG7_SANKS Length = 863 Score = 520 bits (1340), Expect = e-146, Method: Compositional matrix adjust. Identities = 298/750 (39%), Positives = 421/750 (56%), Gaps = 67/750 (8%) Query: 245 LLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPELSLAG 304 +LFS P GY+ R L+ FS N AGACP C G+GV + D ++ +P LS+ Sbjct: 119 MLFSRAGTFP-EGYATR-LDSDAFSPNTVAGACPECHGVGVARTVTEDTLVADPSLSIRD 176 Query: 305 GAIRGWDRRNFYYFQMLKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKENIEFKYMNDR 364 GAI W + + L+ + +DV+ PW L +L+ + ++ DR Sbjct: 177 GAITAWP--GAWQGKNLRDIVIALGYDVDRPWRDLPREDRDWLLFTDEQPVVQITPQRDR 234 Query: 365 GDTSIRRHPFEGVLHNMERR----YKETESSAVREELAKFISNRPCASCEGTRLRREARH 420 P+ G + ++ ++ S +R ++ +F+ + PC C GT LR+EA Sbjct: 235 -----VAKPYNGRFWSAQKYVLHILADSSSQTMRAKVLQFVRSGPCPVCGGTGLRQEALA 289 Query: 421 VYVENTPLPAISDMSIGHAMEFFNNL------------KLAGQRAKIAEKILKEIGDRLK 468 V + ++ + + E +G+ +A I ++ R+ Sbjct: 290 VTFAGRTIAEMNALPLTELAEVIRPTTQLTDAAPALPTNRSGEHTDVAVAITTDLLARIG 349 Query: 469 FLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLL 528 L ++GL YL L R TLS GE QR+RLA+Q+ +GL GV+YVLDEPS GLH D E L+ Sbjct: 350 VLTDLGLGYLGLGRVTTTLSPGEMQRLRLATQLRSGLFGVVYVLDEPSAGLHPADAEPLM 409 Query: 529 GTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLT 588 L L++ GN+V +VEH+ D +R AD V+D+GP AG GGEV+ G + + V +S+T Sbjct: 410 EVLEQLKESGNSVFIVEHNMDLVRKADWVVDVGPAAGTGGGEVLYSGAVAGLADVEQSVT 469 Query: 589 GQYM---SGKRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSG 645 ++ G +E P + P+ L + G +NL + ++P+G+ +TGVSGSG Sbjct: 470 RPFLFPEQGDGAVERPVR----EPKGWLTVEGVTVHNLDGLDASVPLGMLVAVTGVSGSG 525 Query: 646 KSTLINDTLFPIAQRQLNGATI-----------------------------------AEP 670 KSTL++ L + + LNG + A+ Sbjct: 526 KSTLVSRVLRDVVRDHLNGDGLPGGSVAVDEDVDGAEGTAEESEEAGLSEAVLPDARADV 585 Query: 671 APYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESRARGYTPGR 730 RD QGLEH D+++ +DQ PIGRTPRSN ATYTG+F VR FA +R RGYT GR Sbjct: 586 LTVRDAQGLEHVDRLVQVDQKPIGRTPRSNLATYTGLFDAVRSAFAATDLARERGYTAGR 645 Query: 731 FSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKYKGKTIHEVLD 790 FSFNV GGRCE C G+G + VE+ FLP Y C +C G RYN ETLE+ Y G++I +VL Sbjct: 646 FSFNVAGGRCETCLGEGFVSVELLFLPGSYGKCPECHGARYNDETLEVTYDGRSIADVLA 705 Query: 791 MTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTG 850 +T+E+A E +PA AR L+TL+DVGL Y+RLGQ AT LSGGEAQR+KLA EL + G Sbjct: 706 LTVEDAAEALSGIPAAARSLRTLLDVGLGYLRLGQPATELSGGEAQRIKLATELQRVRRG 765 Query: 851 QTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADWIVDLGPEGGS 910 TLY+LDEPTTGLH AD++ LL L L D G+++V++EH++DV+ +ADW+VDLGP GG Sbjct: 766 HTLYLLDEPTTGLHPADVRLLLGQLESLVDSGDSVVIVEHDMDVVASADWVVDLGPSGGD 825 Query: 911 GGGEILVSGTPETVAECEASHTARFLKPML 940 GG ++ SGTP VA S TA +L L Sbjct: 826 AGGRVVASGTPVDVAAEAGSRTAPYLATAL 855 Score = 120 bits (300), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 52/113 (46%), Positives = 84/113 (74%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 63 + VRGA +NL+++++ +PRD ++ TG+SGSGKSSLAF T++ E QRRY+ES++ YAR+ Sbjct: 13 VRVRGANENNLRDVDVDVPRDAIVAFTGVSGSGKSSLAFGTIFTEAQRRYLESVAPYARR 72 Query: 64 FLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVG 116 + P V+ I GL PA++++Q+ + + RS+VGT+T + + LR+LF+R G Sbjct: 73 LIQQGHDPHVESITGLPPAVALQQRRGAPSSRSSVGTVTTLSNSLRMLFSRAG 125 Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 50/158 (31%), Positives = 71/158 (44%), Gaps = 17/158 (10%) Query: 606 PANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGA 665 P P+ +++ GA NNL+DV + +P TGVSGSGKS+L T+F AQR+ Sbjct: 6 PTTPDAFVRVRGANENNLRDVDVDVPRDAIVAFTGVSGSGKSSLAFGTIFTEAQRRY--- 62 Query: 666 TIAEPAPYR----------DIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELF 715 + APY ++ + + + Q + RS+ T T + +R LF Sbjct: 63 -LESVAPYARRLIQQGHDPHVESITGLPPAVALQQRRGAPSSRSSVGTVTTLSNSLRMLF 121 Query: 716 --AGV-PESRARGYTPGRFSFNVRGGRCEACQGDGVIK 750 AG PE A FS N G C C G GV + Sbjct: 122 SRAGTFPEGYATRLDSDAFSPNTVAGACPECHGVGVAR 159 >UniRef50_Q9RCZ2 Putative excinuclease ABC subunit A n=3 Tax=Streptomyces RepID=Q9RCZ2_STRCO Length = 781 Score = 513 bits (1320), Expect = e-143, Method: Compositional matrix adjust. Identities = 292/682 (42%), Positives = 411/682 (60%), Gaps = 40/682 (5%) Query: 263 LEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPELSLAGGAIRGWDRRNFYYFQMLK 322 L+ FS N AGACP C GLG + ++ +P LS+ GAI W + + L+ Sbjct: 130 LDSDAFSPNTAAGACPECHGLGRVHRTTEELLVPDPSLSIRDGAIAAWP--GAWQGKNLR 187 Query: 323 SLADHYKFDVEAPWGSLSANVHKVVLYGSGKENIEFKYMNDRGDTSIRRHPFEGVLHNME 382 + D +DV+ PW L A + +L+ + + + + G I+R P++G + Sbjct: 188 DVLDALGYDVDRPWRELPAEAREWILFTDEQPVVTVHPVREAG--RIQR-PYQGTYMSAR 244 Query: 383 R----RYKETESSAVREELAKFISNRPCASCEGTRLRREARHVYVENTPLPAISDMSIGH 438 R + +++S+ +R + +F+++ PC C G RLR EA V V + ++ + + Sbjct: 245 RYVLKTFADSKSATLRAKAERFLNSAPCPVCGGGRLRAEALAVTVGGRTVAELAALPLA- 303 Query: 439 AMEFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLA 498 E L G+ AK+ + +++ R+ +V +GL YL+L R TLS GE QR+RLA Sbjct: 304 --ELPRLLPTEGEAAKV---LAEDLISRIAPVVELGLGYLSLDRPTPTLSAGELQRLRLA 358 Query: 499 SQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVI 558 +Q+ +GL GV+YVLDEPS GLH D E LL L L+ GN+V VVEH +R AD ++ Sbjct: 359 TQLRSGLFGVVYVLDEPSAGLHPADTEALLTVLERLKAAGNSVFVVEHHLGVMRGADWIV 418 Query: 559 DIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEVPKKRVPANPEKVLKLTGA 618 D+GP AG HGG V+ GP++ + V ES T +++ + V + R P + +T Sbjct: 419 DVGPLAGEHGGRVLYSGPVDGLARVAESATARHLFDRSPAPVREVRTPRGAVTIGPVTR- 477 Query: 619 RGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAEPAPYRDIQG 678 +NL+ VT+ +P+G+ T +TGVSGSGKSTL+ + I E D+ G Sbjct: 478 --HNLRGVTVRVPLGVLTAVTGVSGSGKSTLVGE--------------ITE-----DLPG 516 Query: 679 LEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESRARGYTPGRFSFNVRGG 738 + D+++ +DQ PIGRTPRSN ATYTG+F VR++FA +R RG+ GRFSFNV GG Sbjct: 517 V---DRLVSVDQRPIGRTPRSNLATYTGLFDVVRKVFAATDRARERGFGVGRFSFNVPGG 573 Query: 739 RCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEARE 798 RCE CQG+G + VE+ FLP Y PC C G RYN ETLE+ Y+G+ I EVLD+T+E A + Sbjct: 574 RCETCQGEGFVSVELLFLPSTYAPCPDCGGARYNPETLEVAYRGRNIAEVLDLTVEGAAQ 633 Query: 799 FFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDE 858 FF PA+AR L L+DVGL Y+RLGQ AT LSGGEAQR+KLA EL + G TLY+LDE Sbjct: 634 FFTDTPAVARSLAALLDVGLGYLRLGQPATELSGGEAQRIKLASELQRGRRGHTLYLLDE 693 Query: 859 PTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVS 918 PTTGLH AD++ L+ LH L D G+T+VV+EH++ V+ AD ++DLGP GG GG I+ Sbjct: 694 PTTGLHPADVEVLMRQLHGLVDAGHTVVVVEHDMSVVAGADHVIDLGPGGGDAGGRIVAE 753 Query: 919 GTPETVAECEASHTARFLKPML 940 GTP VA S TA +L L Sbjct: 754 GTPARVAGAAGSATAPYLARAL 775 Score = 126 bits (316), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 59/113 (52%), Positives = 82/113 (72%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 63 + VR AR HNLK +++ +PRD L V TG+SGSGKSSLAF T+YAE QRRY ES++ YAR+ Sbjct: 9 VRVRDAREHNLKGVDVDVPRDVLAVFTGVSGSGKSSLAFGTVYAEAQRRYFESVAPYARR 68 Query: 64 FLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVG 116 + + P V I GL PA+S++Q+ + RS+VGT+T + + LR+LF+R G Sbjct: 69 LIHQIGAPKVGGITGLPPAVSLQQRRATPTSRSSVGTVTNLSNSLRMLFSRAG 121 Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 60/220 (27%), Positives = 90/220 (40%), Gaps = 29/220 (13%) Query: 613 LKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAEPAP 672 +++ AR +NLK V + +P + TGVSGSGKS+L T++ AQR+ AP Sbjct: 9 VRVRDAREHNLKGVDVDVPRDVLAVFTGVSGSGKSSLAFGTVYAEAQRRY----FESVAP 64 Query: 673 YR----------DIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESR 722 Y + G+ + + Q T RS+ T T + +R LF SR Sbjct: 65 YARRLIHQIGAPKVGGITGLPPAVSLQQRRATPTSRSSVGTVTNLSNSLRMLF-----SR 119 Query: 723 ARGYTPG-------RFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRET 775 A Y PG FS N G C C G G + ++ VP + Sbjct: 120 AGTYPPGAERLDSDAFSPNTAAGACPECHGLGRVHRTTE---ELLVPDPSLSIRDGAIAA 176 Query: 776 LEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMD 815 ++GK + +VLD + + +PA AR+ D Sbjct: 177 WPGAWQGKNLRDVLDALGYDVDRPWRELPAEAREWILFTD 216 Score = 45.8 bits (107), Expect = 0.008, Method: Compositional matrix adjust. Identities = 31/102 (30%), Positives = 47/102 (46%), Gaps = 28/102 (27%) Query: 12 HNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQFLSLMEKP 71 HNL+ + + +P L VTG+SGSGKS+L + E L P Sbjct: 478 HNLRGVTVRVPLGVLTAVTGVSGSGKSTLVGEI---------TEDL-------------P 515 Query: 72 DVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFA 113 VD + +S++Q+ PRS + T T + D +R +FA Sbjct: 516 GVDRL------VSVDQRPIGRTPRSNLATYTGLFDVVRKVFA 551 >UniRef50_B1L257 Excinuclease ABC, A subunit n=1 Tax=Clostridium botulinum A3 str. Loch Maree RepID=B1L257_CLOBM Length = 830 Score = 509 bits (1310), Expect = e-142, Method: Compositional matrix adjust. Identities = 286/714 (40%), Positives = 418/714 (58%), Gaps = 29/714 (4%) Query: 239 DPKAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNP 298 D E L A +CP C ++L FSFN P GACPTC+G+G+ D ++I + Sbjct: 129 DLDGESELDEATISCPHCQTKHQKLNMGHFSFNKPQGACPTCNGVGIVTTLDLSQLI-DE 187 Query: 299 ELSLAGGAIRGW--DRRNFYYFQMLKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKENI 356 +L++ GGA+ W +Y L+ A HY F + N + +++ G ++ Sbjct: 188 KLTIEGGAVSLWLDPVIRTHYANTLRKCAAHYGFIFDPTKAIKDYNELERIVFYDGVDSE 247 Query: 357 EFK-YMNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELA-----KFISNRPCASCE 410 FK Y D+ + +G M +E + +VR+E+ + I C C Sbjct: 248 AFKKYFPDK---KAPKRVNDGYFRGMRNFMQEKAAESVRKEIKNSKIERCIRKTDCPDCH 304 Query: 411 GTRLRREARHVYVENTPLPAISDMSI----GHAMEFFNNLKLAGQRAKIAEKILKEIGDR 466 G RL R V ++ + +S ++ G NL Q +A ++ +I R Sbjct: 305 GARLGAVGRTVTLDGLTIIEMSAFTMEQLYGKIKTLSENLSEIAQ--IVASAVMGDILKR 362 Query: 467 LKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNER 526 K ++ +GL YL++ R TLSGGEAQRIRLA+ + +GL GV+Y+LDEP+ GLH RD + Sbjct: 363 TKGIIKIGLGYLSIDRLLGTLSGGEAQRIRLANVMDSGLTGVLYILDEPTTGLHPRDTQL 422 Query: 527 LLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPES 586 LL L LRDLGNTV+V+EHD D + D++ID GPGAG GG++VA G I+ S Sbjct: 423 LLQALNRLRDLGNTVLVIEHDMDFVAHCDYIIDFGPGAGSGGGQIVATGTPREIVKNKAS 482 Query: 587 LTGQYMSGKRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGK 646 TG+Y++ + +PK+ N + + A +NL+++++ +P+G TGVSGSGK Sbjct: 483 ATGKYLNRANTLALPKE---INTNHCIVVRKAHAHNLQNISVEIPLGQLVSFTGVSGSGK 539 Query: 647 STLINDTLFPIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTG 706 S+L+ DT+ ++ + A I+G EH ++I +DQSPIGR RSN ATYT Sbjct: 540 SSLVFDTIVKFSE--------SGSAECDSIRGFEHVKEIITLDQSPIGRQSRSNIATYTD 591 Query: 707 VFTPVRELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQC 766 ++TP+RELFA +P+++ P FSFNV+GGRCE CQG GVI + M FL D+ VPC C Sbjct: 592 LYTPIRELFAALPQAKKLRLKPSDFSFNVKGGRCEKCQGLGVIPLNMQFLDDVEVPCPVC 651 Query: 767 KGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQS 826 GKR+ ++ L + YK I ++L+ T+ E FF +A +LQTL DVGL Y++LGQS Sbjct: 652 IGKRFKKKVLSVTYKDNNISDILEATVSENLTFFADNKEIAGRLQTLCDVGLDYLKLGQS 711 Query: 827 ATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIV 886 TLSGGE QR+KL++E+ K G TLY+LDEPTTGLH DI +LL +L L + N++ Sbjct: 712 TITLSGGECQRIKLSKEMGKSNQGHTLYLLDEPTTGLHPLDIDRLLKLLRSLIARNNSVF 771 Query: 887 VIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLKPML 940 VIEH L+VI +D+I+D+GPEGG GG ++ GTP+ +AE + S T ++LK + Sbjct: 772 VIEHALEVISQSDYIIDIGPEGGISGGRLVAHGTPQQIAENKNSLTGKYLKEFI 825 Score = 125 bits (314), Expect = 8e-27, Method: Compositional matrix adjust. Identities = 65/132 (49%), Positives = 90/132 (68%), Gaps = 12/132 (9%) Query: 2 DKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYA 61 D IE++GA+ HNLKNI++ +P+ KLI +TG+SGSGKS+ A D L E +R+Y+ES+ Sbjct: 3 DYIEIKGAKEHNLKNISVSLPKYKLIALTGISGSGKSTFAMDILQKECRRQYMESMGLVT 62 Query: 62 RQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRC- 120 + KP VD I GLSP+I+I Q+ S+NPRSTVGT TEI YLR+L+A++G C Sbjct: 63 DG----LNKPLVDSITGLSPSIAIRQRVLSNNPRSTVGTYTEILTYLRILYAKLGVRSCT 118 Query: 121 -------PDHDV 125 PD+D+ Sbjct: 119 NCGKKIPPDYDL 130 Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 41/116 (35%), Positives = 63/116 (54%), Gaps = 14/116 (12%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 63 I VR A HNL+NI++ IP +L+ TG+SGSGKSSL FDT+ ++ ES SA Sbjct: 506 IVVRKAHAHNLQNISVEIPLGQLVSFTGVSGSGKSSLVFDTIV-----KFSESGSA---- 556 Query: 64 FLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPR 119 E + E + I+++Q RS + T T+++ +R LFA + + + Sbjct: 557 -----ECDSIRGFEHVKEIITLDQSPIGRQSRSNIATYTDLYTPIRELFAALPQAK 607 Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 50/175 (28%), Positives = 75/175 (42%), Gaps = 41/175 (23%) Query: 613 LKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQ----LNGATIA 668 +++ GA+ +NLK+++++LP +TG+SGSGKST D L +RQ + T Sbjct: 5 IEIKGAKEHNLKNISVSLPKYKLIALTGISGSGKSTFAMDILQKECRRQYMESMGLVTDG 64 Query: 669 EPAPYRD-IQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFA----------- 716 P D I GL I I Q + PRS TYT + T +R L+A Sbjct: 65 LNKPLVDSITGLS---PSIAIRQRVLSNNPRSTVGTYTEILTYLRILYAKLGVRSCTNCG 121 Query: 717 -GVP---------------------ESRARGYTPGRFSFNVRGGRCEACQGDGVI 749 +P +++ + G FSFN G C C G G++ Sbjct: 122 KKIPPDYDLDGESELDEATISCPHCQTKHQKLNMGHFSFNKPQGACPTCNGVGIV 176 >UniRef50_A6TUU6 ABC transporter related n=1 Tax=Alkaliphilus metalliredigens QYMF RepID=A6TUU6_ALKMQ Length = 842 Score = 508 bits (1309), Expect = e-142, Method: Compositional matrix adjust. Identities = 263/693 (37%), Positives = 421/693 (60%), Gaps = 17/693 (2%) Query: 240 PKAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPE 299 P +++ +N C CG + + P++FS+N+P CP C GLGV+ D ++++++PE Sbjct: 145 PWCHQVVDDSN-VCKDCGAILFDRTPQVFSYNHPDYMCPLCKGLGVEMRIDEEKIVEHPE 203 Query: 300 LSLAGGA------IRGWDRR---NFYYFQMLKSLADHYKFDVEAPWGSLSANVHKVVLYG 350 SL GA +R ++ N+ ++L +LAD D+E P+ L + YG Sbjct: 204 KSLLDGASSLYGDLRKHRKKPNANWMRGEIL-ALADDMNVDLELPFYRLPKEFKQQFFYG 262 Query: 351 SGKENIEFKYMNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCE 410 S + Y N +G + + R P EG ++ ++R +T+++ +++ +F+S + C+ C+ Sbjct: 263 SNGREVSLAYENSKGRSGVIRRPVEGAINLIQRLAHDTKATRSTDQVHQFMSKKTCSCCQ 322 Query: 411 GTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNL--KLAGQRAKIAEKILKEIGDRLK 468 G RL E R V ++ P + +SI ++ + + +L ++ I ++ RLK Sbjct: 323 GERLLEEGRLVNIQGYRYPEVVSLSIDKLRKWCHRIYEQLIKEQQDKTRMIFIKLNQRLK 382 Query: 469 FLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLL 528 + +VGL Y+TL+RS +LSGGEAQR++LA+Q G GL ++Y++DEPS GLH +D L+ Sbjct: 383 KIQSVGLGYITLNRSVPSLSGGEAQRLKLATQFGTGLSNILYIMDEPSKGLHPKDYRFLM 442 Query: 529 GTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAI--MAVPES 586 ++ L+ GNTVI+VEH + + AD + +GP AG +GGE+V + I + + Sbjct: 443 DAIVDLKKYGNTVILVEHKKSFLTIADMHLHMGPKAGRYGGELVFVHHRKEIENQLISQD 502 Query: 587 LTGQYMSGKRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGK 646 + + + K V A + ++L G NNLK++ + +P+G+ T + GVSGSGK Sbjct: 503 CSDDFDTIKVIDSVSLDNNKAIKDTYIQLKGVTTNNLKNIDVAIPIGMMTAVIGVSGSGK 562 Query: 647 STLINDTLFPIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTG 706 STLI+ TL+P L G T+ E ++ + G+E F+ V ++Q IG RSNP TYTG Sbjct: 563 STLISKTLYPYIMSSL-GRTVEEKGTFQKVIGIESFEDVCYVNQKAIGSNSRSNPGTYTG 621 Query: 707 VFTPVRELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQC 766 VF +R+ +A +++ + + FSFN + G+C C G G + V MH++ ++YVPC++C Sbjct: 622 VFDLIRQCYADTQQAKKKNLSKEYFSFNSKKGQCPECSGLGEVAVNMHYMDNLYVPCNKC 681 Query: 767 KGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQS 826 GKRY++E L+I K +I ++LD+ I + E F + R+L L VGL Y++LGQS Sbjct: 682 HGKRYSKEVLKITRKDCSIGDILDIEIHDLLEVFQEEKEIVRQLSMLNKVGLGYLKLGQS 741 Query: 827 ATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIV 886 A+TLSGGEAQR+KLA+EL+K LYILDEPTTGLH D+++++DVL +L+++G TI+ Sbjct: 742 ASTLSGGEAQRIKLAKELNKNECKNILYILDEPTTGLHEEDVEKVIDVLKELKEKGATII 801 Query: 887 VIEHNLDVIKTADWIVDLGPEGGSGGGEILVSG 919 +IEHNL +IK D+IV+LGP GG GG IL +G Sbjct: 802 IIEHNLKMIKKCDYIVELGP-GGVQGGHILQAG 833 Score = 115 bits (287), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 55/119 (46%), Positives = 84/119 (70%), Gaps = 1/119 (0%) Query: 3 KIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYAR 62 +I V AR HNLKN+++ I ++ +I++TG+SGSGKSSLAFDT++ E Q+++++ L + Sbjct: 28 EIHVHNARIHNLKNVSVSILKNSIILITGVSGSGKSSLAFDTIFTESQKQFMD-LVLSNQ 86 Query: 63 QFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCP 121 + VD I GL P+I+IEQ++ NPRSTVG++T+I D +LLFA +G+ CP Sbjct: 87 MLNNTFSDVYVDKITGLQPSIAIEQRNLGVNPRSTVGSVTKIADVFKLLFATIGKRVCP 145 Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 39/116 (33%), Positives = 58/116 (50%), Gaps = 7/116 (6%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 63 I+++G T+NLKNI++ IP + V G+SGSGKS+L TLY Y+ +S+ R Sbjct: 529 IQLKGVTTNNLKNIDVAIPIGMMTAVIGVSGSGKSTLISKTLYP-----YI--MSSLGRT 581 Query: 64 FLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPR 119 V IE + QK+ N RS GT T + D +R +A + + Sbjct: 582 VEEKGTFQKVIGIESFEDVCYVNQKAIGSNSRSNPGTYTGVFDLIRQCYADTQQAK 637 Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 46/160 (28%), Positives = 71/160 (44%), Gaps = 33/160 (20%) Query: 618 ARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAEPA---PYR 674 AR +NLK+V++++ ITGVSGSGKS+L DT+F +Q+Q ++ + Sbjct: 34 ARIHNLKNVSVSILKNSIILITGVSGSGKSSLAFDTIFTESQKQFMDLVLSNQMLNNTFS 93 Query: 675 DIQGLEHFDKV------IDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESRA----- 723 D+ + DK+ I I+Q +G PRS + T + + LFA + + Sbjct: 94 DV----YVDKITGLQPSIAIEQRNLGVNPRSTVGSVTKIADVFKLLFATIGKRVCPWCHQ 149 Query: 724 ---------------RGYTPGRFSFNVRGGRCEACQGDGV 748 TP FS+N C C+G GV Sbjct: 150 VVDDSNVCKDCGAILFDRTPQVFSYNHPDYMCPLCKGLGV 189 >UniRef50_C8VVR7 ABC transporter related n=1 Tax=Desulfotomaculum acetoxidans DSM 771 RepID=C8VVR7_DESAS Length = 823 Score = 506 bits (1302), Expect = e-141, Method: Compositional matrix adjust. Identities = 279/697 (40%), Positives = 409/697 (58%), Gaps = 21/697 (3%) Query: 247 FSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPELSLAGGA 306 F C CGY M +L FS N GAC TC+GLG + + V N LSL GA Sbjct: 137 FKVFMYCSQCGYRMEKLTRTYFSCNTREGACTTCEGLGKVLDINKENV-ANESLSLEDGA 195 Query: 307 IRGWDRR-NFYYFQMLKSLADHYK--FDVEAPWGSLSANVHKVVLY-GSGKENIEFKYMN 362 I W+++ Y L + HY F+ P S N+ K +LY G E ++ + Sbjct: 196 IDFWEQKYKEYQISSLYNAFRHYGIPFNDNTPVADFS-NIQKAILYQGVESEEVKKAFSG 254 Query: 363 DRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGTRLRREARHVY 422 ++ FEGV + RR + A ++L + + C C G RL +R V Sbjct: 255 ILPPKTVAGGRFEGVFPTLWRRMSDKGGEA--KQLNDYFNYDICPDCRGERLGALSRSVT 312 Query: 423 VENTPLPAISDMSIGHAMEFFNNLK--LAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTL 480 VE+T LP +S +S+ + L+ L Q K+ E L ++ +++ ++NVGL YL+L Sbjct: 313 VESTRLPELSLLSLEELYTWIQKLEDSLTDQNYKLVEPYLMDLKTKIQRILNVGLGYLSL 372 Query: 481 SRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNT 540 R TLSGGE QR++LA+ + + L G++Y++DEP+IGLH +D E ++ L LRDLGNT Sbjct: 373 DRQTITLSGGELQRVKLAATLDSDLTGIIYIMDEPTIGLHPKDTEGMITILKKLRDLGNT 432 Query: 541 VIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEV 600 VIV+EHD D ++AAD+++DIGPG+G HGGE++ G L+ + S+TG Y+ RK + Sbjct: 433 VIVIEHDPDIMQAADYIVDIGPGSGKHGGEIIGTGTLDELKEQEASVTGTYL---RKEKQ 489 Query: 601 PKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQR 660 +K +K+ A NLK++ ++ P+G +TGVSGSGKSTL+ + L + Sbjct: 490 DRKEFRKGTGNAIKVENANLYNLKNIGVSFPIGCLNTVTGVSGSGKSTLVFEVLAEARNK 549 Query: 661 QLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPE 720 + + I G+E FD+++ I+QS I + RSN ATY+ V+T VR++F + E Sbjct: 550 KQTSRNV--------ISGMEQFDQIVTIEQSAITKMKRSNIATYSEVYTEVRKIFGSLKE 601 Query: 721 SRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKY 780 ++ RG + FSFN GGRCE C+G G + M F DI V C C GK+++ + L +KY Sbjct: 602 AKDRGLSAKHFSFNTPGGRCENCEGLGYVTSNMLFFKDIEVTCPVCGGKQFSDDVLSVKY 661 Query: 781 KGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKL 840 K +I ++L M++EEA F P + R L+ L DVGL Y+ LGQS TTLSGGE QR+KL Sbjct: 662 KDCSIKDILQMSVEEAFSMFHNHPKIERILKLLEDVGLGYLELGQSLTTLSGGEGQRLKL 721 Query: 841 ARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADW 900 A+EL +LY++DEPTTGLH D++ L +L+++ D GNT++V+EHN VIK +DW Sbjct: 722 AKELINNNGKHSLYLMDEPTTGLHPIDVENFLTLLNRMVDSGNTVIVVEHNQQVIKASDW 781 Query: 901 IVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLK 937 I DLGPEGG GG+++ +GTP + + TA FL+ Sbjct: 782 ITDLGPEGGINGGKLVFAGTPSEMLINGETITAEFLR 818 Score = 122 bits (306), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 62/137 (45%), Positives = 92/137 (67%), Gaps = 6/137 (4%) Query: 1 MDKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAY 60 M I VRGAR NLK+I+L IPR+KLIV TGLSGSGK++LA D ++ E QR+Y+E++ Sbjct: 1 MSNIIVRGAREGNLKDISLEIPREKLIVFTGLSGSGKTTLAIDVIFQECQRQYLEAMG-- 58 Query: 61 ARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRC 120 L + KP +D I +SPA+ I Q ++ NPRSTVGT+T+I+ LR+++ ++G C Sbjct: 59 ----LQGINKPKIDFIHNVSPAVIITQNESNKNPRSTVGTLTDIYTDLRMVYEKLGVRVC 114 Query: 121 PDHDVPLAAQTVSQMVD 137 P + ++A + V+ Sbjct: 115 PKCNKVISAAECKEEVE 131 Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 39/118 (33%), Positives = 63/118 (53%), Gaps = 14/118 (11%) Query: 2 DKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYA 61 + I+V A +NLKNI + P L VTG+SGSGKS+L F+ L AE + + + Sbjct: 500 NAIKVENANLYNLKNIGVSFPIGCLNTVTGVSGSGKSTLVFEVL-AEARNK-----KQTS 553 Query: 62 RQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPR 119 R +S ME+ D ++IEQ + + RS + T +E++ +R +F + E + Sbjct: 554 RNVISGMEQFD--------QIVTIEQSAITKMKRSNIATYSEVYTEVRKIFGSLKEAK 603 Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 46/169 (27%), Positives = 67/169 (39%), Gaps = 36/169 (21%) Query: 617 GARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAEPAPYRDI 676 GAR NLKD++L +P TG+SGSGK+TL D +F QRQ A + I Sbjct: 8 GAREGNLKDISLEIPREKLIVFTGLSGSGKTTLAIDVIFQECQRQYLEAMGLQGINKPKI 67 Query: 677 QGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGV-----PES---------- 721 + + + I Q+ + PRS T T ++T +R ++ + P+ Sbjct: 68 DFIHNVSPAVIITQNESNKNPRSTVGTLTDIYTDLRMVYEKLGVRVCPKCNKVISAAECK 127 Query: 722 ---------------------RARGYTPGRFSFNVRGGRCEACQGDGVI 749 R T FS N R G C C+G G + Sbjct: 128 EEVEKTDEDFKVFMYCSQCGYRMEKLTRTYFSCNTREGACTTCEGLGKV 176 >UniRef50_B8FST5 ABC transporter related n=5 Tax=Firmicutes RepID=B8FST5_DESHD Length = 820 Score = 503 bits (1294), Expect = e-140, Method: Compositional matrix adjust. Identities = 271/696 (38%), Positives = 409/696 (58%), Gaps = 18/696 (2%) Query: 247 FSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPELSLAGGA 306 F C CG+ M +L FS+N GACPTC GLG + D V+ N +LSL GA Sbjct: 137 FKVYMYCNHCGHKMDKLTRTYFSYNTREGACPTCQGLGKILQVNKDNVV-NEKLSLEAGA 195 Query: 307 IRGWDRR-NFYYFQMLKSLADHYKFDVE--APWGSLSANVHKVVL-YGSGKENIEFKYMN 362 + W+++ Y +L + HY +E P + NV K +L YG + ++ + + Sbjct: 196 VDFWEQKYKDYQISVLYNAFQHYGVPIEPDTPVREFT-NVQKAILFYGVDSDQVKEFFPD 254 Query: 363 DRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGTRLRREARHVY 422 + ++ FEG+ + RR E S L+ + + + C C G RL +R V Sbjct: 255 IQAPKTVGGGRFEGIYPVLWRRI--AEKSGDPRGLSAYFAEQICPDCAGERLNGLSRSVT 312 Query: 423 VENTPLPAISDMSIGHAMEFFNNLK--LAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTL 480 V T LP ++ +S+ ++ L+ + G + L ++ +++ ++ VGL YL+L Sbjct: 313 VLGTRLPELASLSLEELQDWLIKLEDSVTGTHQDLVASYLNDLKTKIRRIIKVGLGYLSL 372 Query: 481 SRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNT 540 R TLSGGEAQRI+LA+ + + L G++Y++DEP+IGLH +D + ++ L LRDLGNT Sbjct: 373 DRQTMTLSGGEAQRIKLAATLDSTLTGIIYIMDEPTIGLHPQDTQGIIQILKELRDLGNT 432 Query: 541 VIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEV 600 VIV+EHD D + AAD ++DIGPGAG GGE+V +G ++ + S+TG Y++ R + Sbjct: 433 VIVIEHDMDVMSAADFIVDIGPGAGKLGGEIVGQGSIDELKEQGRSVTGLYLN--RPVRE 490 Query: 601 PKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQR 660 + E +++ NLK++ + PVG +TGVSGSGKSTL+ + L R Sbjct: 491 ARSYRKGTGE-FIEVQHGDLYNLKNINVRFPVGCLISVTGVSGSGKSTLVFEVLAKGKYR 549 Query: 661 QLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPE 720 + +P + G E F+++I ++QSP+ R RSN ATY+GV+T +R++F + E Sbjct: 550 -----SQGDPMKRNHVAGTELFEQIITVEQSPVTRMKRSNVATYSGVYTEIRKIFGNLSE 604 Query: 721 SRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKY 780 +R +G TP FSFN RGGRCE C+G G + M F D+ V C C G ++ E L +KY Sbjct: 605 ARRKGITPRHFSFNSRGGRCENCEGLGYVVSNMLFFEDLEVSCPVCHGDQFQDEVLSVKY 664 Query: 781 KGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKL 840 +G +I +VL M++EEA F P + + L+ L +VGL Y+ LGQ+ TTLSGGE QR+KL Sbjct: 665 QGHSIKDVLGMSVEEALAVFALHPRITKVLELLEEVGLGYLELGQTLTTLSGGEGQRLKL 724 Query: 841 ARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADW 900 A+EL LY++DEPTTGLH D++ L +L+++ D G+T++V+EHN V++ +DW Sbjct: 725 AKELIGNEGKTNLYLIDEPTTGLHPLDVENFLALLNRMVDAGSTVIVVEHNQQVMQASDW 784 Query: 901 IVDLGPEGGSGGGEILVSGTPETVAECEASHTARFL 936 I+DLGPEGG GG ++ GTPE + S T RFL Sbjct: 785 IIDLGPEGGHKGGRVMAVGTPEQIKSEPDSVTGRFL 820 Score = 111 bits (277), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 53/121 (43%), Positives = 78/121 (64%), Gaps = 6/121 (4%) Query: 1 MDKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAY 60 M I + G R NLK+I+L +PR+KL++ TGLSGSGK++LA D LY E QR+Y+E++ Sbjct: 1 MADIFLHGVREGNLKDISLTLPRNKLVIFTGLSGSGKTTLAIDVLYQECQRQYLEAIGYQ 60 Query: 61 ARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRC 120 + KP +D + SPA+ I Q NPRSTVGT+T I+ LR+++ ++ + C Sbjct: 61 G------IHKPKLDELRNASPAVRITQNEYRKNPRSTVGTVTNIYTELRMIYEKLSQRTC 114 Query: 121 P 121 P Sbjct: 115 P 115 Score = 65.5 bits (158), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 48/171 (28%), Positives = 68/171 (39%), Gaps = 36/171 (21%) Query: 615 LTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAEPAPYR 674 L G R NLKD++LTLP TG+SGSGK+TL D L+ QRQ A + Sbjct: 6 LHGVREGNLKDISLTLPRNKLVIFTGLSGSGKTTLAIDVLYQECQRQYLEAIGYQGIHKP 65 Query: 675 DIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPE-------------- 720 + L + + I Q+ + PRS T T ++T +R ++ + + Sbjct: 66 KLDELRNASPAVRITQNEYRKNPRSTVGTVTNIYTELRMIYEKLSQRTCPHCHRDIRADQ 125 Query: 721 ----------------------SRARGYTPGRFSFNVRGGRCEACQGDGVI 749 + T FS+N R G C CQG G I Sbjct: 126 CQEELEKREDEFKVYMYCNHCGHKMDKLTRTYFSYNTREGACPTCQGLGKI 176 Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 41/116 (35%), Positives = 60/116 (51%), Gaps = 11/116 (9%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 63 IEV+ +NLKNIN+ P LI VTG+SGSGKS+L F+ L A+G+ R Sbjct: 502 IEVQHGDLYNLKNINVRFPVGCLISVTGVSGSGKSTLVFEVL-AKGKYRSQG-------- 552 Query: 64 FLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPR 119 M++ V E I++EQ + RS V T + ++ +R +F + E R Sbjct: 553 --DPMKRNHVAGTELFEQIITVEQSPVTRMKRSNVATYSGVYTEIRKIFGNLSEAR 606 >UniRef50_Q5WJS0 Excinuclease ABC subunit A n=38 Tax=cellular organisms RepID=Q5WJS0_BACSK Length = 751 Score = 501 bits (1291), Expect = e-140, Method: Compositional matrix adjust. Identities = 279/684 (40%), Positives = 398/684 (58%), Gaps = 71/684 (10%) Query: 264 EPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPELSLAGGAIR-------GWDRRNFY 316 E +FSFN+P G CP C+G+G + D D+ + + SL GAI+ GWD Sbjct: 127 ESNMFSFNDPQGMCPECNGIGRKLNVDMDKAVDLSK-SLNEGAIKLPDYKVDGWD----- 180 Query: 317 YFQMLKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKENIEFKYMNDRGDTSIRRHPFEG 376 + FD + S + +LY K+ ++ + + ++ EG Sbjct: 181 ----WSLVVQAGPFDPDKKLSHYSDEELEKLLYSKAKK-VKMDFAGKATNVTV-----EG 230 Query: 377 VLHNMERRY----KETESSAVREELAKFISNRPCASCEGTRLRREARHVYVENTPLPAIS 432 V+ +Y +T+S ++ +A FI+ C++C G+RL + A + + +S Sbjct: 231 VIEKFTNKYIKQDLKTKSERTQKAVAPFITEGTCSTCHGSRLSQAALSCKMNGFNIAEMS 290 Query: 433 DMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEA 492 M +G + + + +A +A I+K + +RL+ LV++GL+YLTL R +TLSGGE+ Sbjct: 291 SMEVGQLIRIIHEVDIA-----VAAPIVKSLSERLQHLVDIGLDYLTLDRETDTLSGGES 345 Query: 493 QRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIR 552 QR+++ + LV V Y+ DEPS+GLH RD RL L LRD GNTVIVVEHD D I+ Sbjct: 346 QRVKMVKHLSGSLVDVTYIFDEPSVGLHPRDVHRLNELLQKLRDKGNTVIVVEHDPDVIK 405 Query: 553 AADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEVPKKRVPANPEKV 612 ADH++D+GP AG HGG +V EG + ++ +LTG +M KR +E+ K P Sbjct: 406 VADHIVDVGPHAGSHGGTIVYEGSFQGLLE-SGTLTGTHM--KRPLEL--KHDTRQPSGK 460 Query: 613 LKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAEPAP 672 L + A +NL+DV +T+P G+ T +TGV+GSGKSTLIND Q GA + Sbjct: 461 LSIKNATLHNLQDVNVTIPTGVLTVVTGVAGSGKSTLINDVFLS----QNPGAIV----- 511 Query: 673 YRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESRARGYTPGRFS 732 IDQS +G + RSNPATYTG+ VR+ FA A G FS Sbjct: 512 ---------------IDQSAVGVSTRSNPATYTGIMDDVRKAFAS-----ANKVNKGLFS 551 Query: 733 FNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKYKGKTIHEVLDMT 792 FN +G CE CQG GV+ ++ FL + +PC+ C+G+R+ E L K GK+I EVL+MT Sbjct: 552 FNSKGA-CENCQGLGVVYTDLAFLESVKLPCEVCRGRRFKEEVLAYKLNGKSIAEVLEMT 610 Query: 793 IEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQT 852 +E A EFF+ + RKLQ + DVGL YI LGQ +TLSGGE QR+KLA EL K+G+ Sbjct: 611 VERALEFFEQ-KEIVRKLQAMSDVGLDYITLGQPLSTLSGGECQRIKLASELHKQGS--- 666 Query: 853 LYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADWIVDLGPEGGSGG 912 +Y++DEPTTGLH +DI LL ++++L D GNT++VIEHNLDVI ADWI+D+GP+GGS G Sbjct: 667 IYVMDEPTTGLHMSDIGLLLTIMNRLVDAGNTVIVIEHNLDVISQADWIIDMGPDGGSNG 726 Query: 913 GEILVSGTPETVAECEASHTARFL 936 GE++ GTP + E S T ++L Sbjct: 727 GEVVFEGTPSQIIHAEQSITGKYL 750 Score = 139 bits (351), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 76/189 (40%), Positives = 109/189 (57%), Gaps = 17/189 (8%) Query: 405 PCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIG 464 PC C G R + E + + + +M++ A+EFF KEI Sbjct: 580 PCEVCRGRRFKEEVLAYKLNGKSIAEVLEMTVERALEFFEQ---------------KEIV 624 Query: 465 DRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDN 524 +L+ + +VGL+Y+TL + TLSGGE QRI+LAS++ G +YV+DEP+ GLH D Sbjct: 625 RKLQAMSDVGLDYITLGQPLSTLSGGECQRIKLASELHKQ--GSIYVMDEPTTGLHMSDI 682 Query: 525 ERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVP 584 LL + L D GNTVIV+EH+ D I AD +ID+GP G +GGEVV EG I+ Sbjct: 683 GLLLTIMNRLVDAGNTVIVIEHNLDVISQADWIIDMGPDGGSNGGEVVFEGTPSQIIHAE 742 Query: 585 ESLTGQYMS 593 +S+TG+Y++ Sbjct: 743 QSITGKYLA 751 Score = 113 bits (283), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 56/115 (48%), Positives = 78/115 (67%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 63 I + GAR +NL+N++L IP+ K+ + TG+SGSGKSS+ FDT+ AE R E+ S + R Sbjct: 9 IVISGARENNLQNVSLRIPKRKITIFTGVSGSGKSSIVFDTIAAESTRLLNENFSMFVRS 68 Query: 64 FLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEP 118 FL + +PD D IE LS A+ ++QK ST+GTIT+I LRLLF+R G+P Sbjct: 69 FLPRVPQPDTDAIENLSMAVIVDQKRLGGGSHSTMGTITDISPILRLLFSRAGQP 123 Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 50/149 (33%), Positives = 72/149 (48%), Gaps = 13/149 (8%) Query: 607 ANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGA- 665 +N E ++ ++GAR NNL++V+L +P T TGVSGSGKS+++ DT+ + R LN Sbjct: 4 SNREYIV-ISGARENNLQNVSLRIPKRKITIFTGVSGSGKSSIVFDTIAAESTRLLNENF 62 Query: 666 -----TIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELF--AGV 718 + P D +E+ + +DQ +G S T T + +R LF AG Sbjct: 63 SMFVRSFLPRVPQPDTDAIENLSMAVIVDQKRLGGGSHSTMGTITDISPILRLLFSRAGQ 122 Query: 719 PESRARGYTPGRFSFNVRGGRCEACQGDG 747 P FSFN G C C G G Sbjct: 123 PYVGESNM----FSFNDPQGMCPECNGIG 147 Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust. Identities = 37/111 (33%), Positives = 52/111 (46%), Gaps = 30/111 (27%) Query: 3 KIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYAR 62 K+ ++ A HNL+++N+ IP L VVTG++GSGKS+L D Sbjct: 460 KLSIKNATLHNLQDVNVTIPTGVLTVVTGVAGSGKSTLINDV------------------ 501 Query: 63 QFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFA 113 FLS + P AI I+Q + + RS T T I D +R FA Sbjct: 502 -FLS--QNPG---------AIVIDQSAVGVSTRSNPATYTGIMDDVRKAFA 540 >UniRef50_C4ZKV2 Excinuclease ABC, A subunit n=1 Tax=Thauera sp. MZ1T RepID=C4ZKV2_THASP Length = 2017 Score = 497 bits (1279), Expect = e-138, Method: Compositional matrix adjust. Identities = 271/572 (47%), Positives = 359/572 (62%), Gaps = 31/572 (5%) Query: 400 FISNRPCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKI 459 +S+ PC +C+G RL AR V + L ++ + A FF +L L + IA + Sbjct: 1440 IVSDEPCPACDGARLNPVARAVRFRDLGLHQLAAQPVDRAAGFFADLALNERETDIARDL 1499 Query: 460 LKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGL 519 + EI RL FL +VGL YL L R+A TLSGGEAQRIRLA+Q+G+ L GV Y+LDEP+IGL Sbjct: 1500 VSEIRGRLAFLQHVGLGYLALDRAAPTLSGGEAQRIRLAAQLGSNLRGVCYILDEPTIGL 1559 Query: 520 HQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEA 579 H RDN LL TL LRD GNT++VVEHDED IR ADHVID+GPGAGV GG VVAEG + Sbjct: 1560 HPRDNRLLLDTLEALRDRGNTLLVVEHDEDTIRRADHVIDLGPGAGVRGGRVVAEGTIAD 1619 Query: 580 IMAVPESLTGQYMSGKRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCIT 639 ++A PES TG+ + + +R A +++ GA +NL+D+ + +P+ T +T Sbjct: 1620 LLAAPESATGECFRHPLQHPLRPRRAVALENPAIRIEGANLHNLRDIDVRIPLARLTVVT 1679 Query: 640 GVSGSGKSTLINDTLF---------PIAQR-----QLNGATIAEP-APYRDIQGLEHFDK 684 GVSGSGKS+L D + P A R Q + +P + G + Sbjct: 1680 GVSGSGKSSLARDVIHANLRARLGDPEATRARRRGQAQPEAVDQPLVGCAAMPGWHQVGR 1739 Query: 685 VIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESRARGYTPGRFSFNVRGGRCEACQ 744 V+++DQ+PIG+TPRS PATY G + +R+LFA ++R RG+ RFSFN GRC C Sbjct: 1740 VLEVDQTPIGKTPRSCPATYVGFWDAIRKLFADTFDARTRGWNASRFSFNTGAGRCPVCD 1799 Query: 745 GDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAVP 804 G G VEM FLPD+ PC+ C G R+N ETL +++K +T+ EVL M ++EA +FF A P Sbjct: 1800 GAGQTTVEMSFLPDVKTPCEACGGARFNPETLSVRWKDRTVAEVLAMPVDEAVDFFSAHP 1859 Query: 805 ALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSK--------RGTG------ 850 A+A LQ L DVGL Y+ LGQ + TLSGGEAQR+KL EL+K TG Sbjct: 1860 AIAHPLQLLQDVGLGYLTLGQPSPTLSGGEAQRIKLVTELAKVRRRPGDAEDTGGVPLPA 1919 Query: 851 --QTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADWIVDLGPEG 908 +LY+LDEPT GLH AD+ +L+ VLH+L D G+T++VIEH+LDV+ ADW++DLGPEG Sbjct: 1920 DKHSLYVLDEPTVGLHMADVDKLIRVLHRLTDAGHTVLVIEHDLDVMAEADWLIDLGPEG 1979 Query: 909 GSGGGEILVSGTPETVAECEASHTARFLKPML 940 G GGG ++ G PE SHT R L+ L Sbjct: 1980 GEGGGRVVAEGPPEVAMATPESHTGRHLREFL 2011 Score = 475 bits (1223), Expect = e-132, Method: Compositional matrix adjust. Identities = 243/517 (47%), Positives = 326/517 (63%), Gaps = 28/517 (5%) Query: 446 LKLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGL 505 L L G + E +L EI RL +L +VGL YLTL R + TLSGGE QRI L + +G L Sbjct: 546 LALPGVADEATELVLGEIRSRLTYLADVGLGYLTLDRQSRTLSGGEVQRINLTTALGTSL 605 Query: 506 VGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAG 565 V ++VLDEPSIGLH RD R+LG + LRD GNT++VVEHD + AAD +++IGPG G Sbjct: 606 VNTLFVLDEPSIGLHPRDIGRILGVMTRLRDAGNTLVVVEHDPQVMVAADELLEIGPGPG 665 Query: 566 VHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEVPKKRVP---ANPEKVLKLTGARGNN 622 GG++VA G I A P+S+TG +++G ++I+V + P A P LKL GAR +N Sbjct: 666 ERGGDIVARGTPAEIAANPDSVTGPWLAGTKRIDVDRPPRPVDAATPR--LKLVGARQHN 723 Query: 623 LKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAEPAPYRDIQGLEHF 682 L+D+T+ P+ TC+TGVSGSGKSTLI D LFP + G P + ++ +++ Sbjct: 724 LRDLTVGFPLRRLTCLTGVSGSGKSTLIQDVLFPALAKHF-GEAAESPGVFDRLENVDNL 782 Query: 683 DKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESRARGYTPGRFSFNVRGGRCEA 742 V+ +DQSPIG++ RSNP +Y G + P+R LFA +PE++ RGYTPG FSFN GRC Sbjct: 783 RGVVMVDQSPIGKSSRSNPVSYVGAWDPIRALFAALPEAKQRGYTPGTFSFNAGHGRCPT 842 Query: 743 CQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDA 802 C G G VEM FL D+++ C C GKRY E LE+++ G ++ +VL++T+ EA + F Sbjct: 843 CTGSGFEHVEMQFLSDVWLRCPDCDGKRYRPEVLELQWNGLSVADVLELTVHEALDVFRE 902 Query: 803 VPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQT---------- 852 P + L L DVGL Y+RLGQ TLSGGEAQR+KLA L++ + Sbjct: 903 HPKVLAALAPLADVGLDYLRLGQPVPTLSGGEAQRLKLAGHLAEAAQKKPVRKASVVDKF 962 Query: 853 ------------LYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADW 900 L++ DEPTTGLHF D+ +LL KL G++++VIEHNLDVI +DW Sbjct: 963 GDKAGDKTEPGLLFLFDEPTTGLHFEDVAKLLGAFDKLLQAGHSLIVIEHNLDVIAASDW 1022 Query: 901 IVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLK 937 I+DLGPEGG GG I+V G PE V +SHT L+ Sbjct: 1023 IIDLGPEGGEDGGAIVVEGPPEAVRAHASSHTGAALR 1059 Score = 241 bits (614), Expect = 1e-61, Method: Compositional matrix adjust. Identities = 123/292 (42%), Positives = 181/292 (61%), Gaps = 3/292 (1%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 63 IE+R AR HNLKN++L IPRD+ V+TGLSGSGKS+LAFD ++ EGQRRY+ESL+AYARQ Sbjct: 1138 IEIRHAREHNLKNVSLQIPRDQFTVITGLSGSGKSTLAFDIVFGEGQRRYLESLNAYARQ 1197 Query: 64 FLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCPDH 123 F+ +PDVD + G+ P ++IEQ+++ +STV T+TEIH +LRL++ ++G CPD Sbjct: 1198 FVQPASRPDVDGLFGIPPTVAIEQRTSRGGRKSTVATLTEIHPFLRLMYVKLGTQFCPDC 1257 Query: 124 DVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARIDGEV 183 +VP+ Q+ +V + + G + +LAP++ RKG +T + +G+ + R+DGE Sbjct: 1258 NVPVTPQSFEAIVAQLQRELRGASVEVLAPLVVNRKGLYTDLAKWARGKGHAQLRVDGEY 1317 Query: 184 CDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVADMDDPKAE 243 + P+L+ K+H IE+ V+ + L E ALE+ G V ++ A Sbjct: 1318 LPTAKWPRLDRYKEHNIELPTGMVVVQPESEATLREFVRQALEIGKGVIKVLEIGKLGAV 1377 Query: 244 ELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQ---QYFDPD 292 + FS ACP CG E +PRLFS+N G CP C G G++ + DPD Sbjct: 1378 PITFSTLRACPSCGTGFPEPDPRLFSYNAKHGWCPKCYGTGLKTAARIEDPD 1429 Score = 229 bits (585), Expect = 3e-58, Method: Compositional matrix adjust. Identities = 153/433 (35%), Positives = 228/433 (52%), Gaps = 35/433 (8%) Query: 2 DKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYA 61 D I +RGAR +NL+N++L +P ++L VVTG+SGSGKSSL FDTLYAEGQRRYVE+ S YA Sbjct: 19 DAIRIRGARQNNLRNLSLDLPLNRLTVVTGVSGSGKSSLVFDTLYAEGQRRYVETFSPYA 78 Query: 62 RQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCP 121 RQFL M+KP VD IEG+ PAI+I+Q + RSTVGT+TE+ D+ +LL+AR C Sbjct: 79 RQFLDRMDKPQVDRIEGVPPAIAIDQTNPVRTSRSTVGTMTELADHFKLLYARAAHLHCR 138 Query: 122 DHDVPL---AAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGY--IR 176 P+ +A +++ + + RL++ P+ + LA+QGY I+ Sbjct: 139 CCGKPVRRDSAVSIAADLRARAAAAGDPRLVVCFPVTVPSSFSEEEVTGLLAAQGYTRIQ 198 Query: 177 ARIDGEVCDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGG-TAVVA 235 R+ G + + + ++VV DRF+ + RLAE+ E AL+ G AV A Sbjct: 199 ERLAG----------VGAEGQDVLQVVQDRFRASNAEDSRLAEALEAALQRGHGRLAVYA 248 Query: 236 DMDDPKAEE---------LLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQ 286 + +AE+ +S+ C C E P LFSFN+P GAC TC G G Sbjct: 249 SGEGVRAEKSAGTPGEAVWRYSSGLHCADCDIHYSEATPGLFSFNSPIGACETCRGFGRV 308 Query: 287 QYFDPDRVIQNPELSLAGGAIRGWDRRNFYYFQM-LKSLADHYKFDVEAPWGSLSANVHK 345 D V+ + +LA GAI+ W ++ Q L+ +A Y ++ P L + Sbjct: 309 IGVDFGLVVPDESKTLAEGAIKPWQTESYRECQQDLEKMAKKYGVAMDIPVRDLPPEHRQ 368 Query: 346 VVLYGSGKENIEFKYMNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRP 405 + G + K+ N D+S R+ + GV H + + +R L+++ S Sbjct: 369 WLFEG------DPKWKN--WDSSWPRY-WYGVRHFFDWLETKAYKMHIRVLLSRYRSYTE 419 Query: 406 CASCEGTRLRREA 418 C +C G RL+ +A Sbjct: 420 CPACHGARLKPDA 432 Score = 137 bits (346), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 85/239 (35%), Positives = 121/239 (50%), Gaps = 28/239 (11%) Query: 728 PGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIY------------VPCDQCKGKRYNRET 775 P FS+N + G C C G G+ PD PC C G R N Sbjct: 1399 PRLFSYNAKHGWCPKCYGTGLKTAARIEDPDALDLGDAEEVIVSDEPCPACDGARLNPVA 1458 Query: 776 LEIKYKGKTIHEVLDMTIEEAREFF--------------DAVPALARKLQTLMDVGLTYI 821 ++++ +H++ ++ A FF D V + +L L VGL Y+ Sbjct: 1459 RAVRFRDLGLHQLAAQPVDRAAGFFADLALNERETDIARDLVSEIRGRLAFLQHVGLGYL 1518 Query: 822 RLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQ 881 L ++A TLSGGEAQR++LA +L G YILDEPT GLH D + LLD L LRD+ Sbjct: 1519 ALDRAAPTLSGGEAQRIRLAAQLGSNLRG-VCYILDEPTIGLHPRDNRLLLDTLEALRDR 1577 Query: 882 GNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGT-PETVAECEASHTARFLKPM 939 GNT++V+EH+ D I+ AD ++DLGP G GG ++ GT + +A E++ F P+ Sbjct: 1578 GNTLLVVEHDEDTIRRADHVIDLGPGAGVRGGRVVAEGTIADLLAAPESATGECFRHPL 1636 Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 103/398 (25%), Positives = 155/398 (38%), Gaps = 102/398 (25%) Query: 406 CASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGD 465 C C+G R R E + + + ++++ A++ F K+L Sbjct: 863 CPDCDGKRYRPEVLELQWNGLSVADVLELTVHEALDVFRE----------HPKVLAA--- 909 Query: 466 RLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIG----------AGLV--------- 506 L L +VGL+YL L + TLSGGEAQR++LA + A +V Sbjct: 910 -LAPLADVGLDYLRLGQPVPTLSGGEAQRLKLAGHLAEAAQKKPVRKASVVDKFGDKAGD 968 Query: 507 ----GVMYVLDEPSIGLHQRDNERLLGTLIHLR-----------------------DLG- 538 G++++ DEP+ GLH D +LLG L DLG Sbjct: 969 KTEPGLLFLFDEPTTGLHFEDVAKLLGAFDKLLQAGHSLIVIEHNLDVIAASDWIIDLGP 1028 Query: 539 -----NTVIVVEHDEDAIRA----------ADHVIDIG------------------PGAG 565 IVVE +A+RA D+ + PG+ Sbjct: 1029 EGGEDGGAIVVEGPPEAVRAHASSHTGAALRDYAEALARTRAGNRGLSPVSADAEAPGSR 1088 Query: 566 VHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEVPKKRVPANP--EKVLKLTGARGNNL 623 G G A+ +G R + + RV P +++ AR +NL Sbjct: 1089 RSGASRDHGGSGRAVATESAIAACAAPTGDRSLVAAEPRVEYRPVAAPAIEIRHAREHNL 1148 Query: 624 KDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQ----LNGAT--IAEPAPYRDIQ 677 K+V+L +P FT ITG+SGSGKSTL D +F QR+ LN +PA D+ Sbjct: 1149 KNVSLQIPRDQFTVITGLSGSGKSTLAFDIVFGEGQRRYLESLNAYARQFVQPASRPDVD 1208 Query: 678 GLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELF 715 GL + I+Q +S AT T + +R ++ Sbjct: 1209 GLFGIPPTVAIEQRTSRGGRKSTVATLTEIHPFLRLMY 1246 Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 45/122 (36%), Positives = 66/122 (54%), Gaps = 16/122 (13%) Query: 606 PANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGA 665 PA+ +++ GAR NNL++++L LP+ T +TGVSGSGKS+L+ DTL+ QR+ Sbjct: 14 PASISDAIRIRGARQNNLRNLSLDLPLNRLTVVTGVSGSGKSSLVFDTLYAEGQRRY--- 70 Query: 666 TIAEPAPYRDIQGLEHFDK-----------VIDIDQSPIGRTPRSNPATYTGVFTPVREL 714 + +PY Q L+ DK I IDQ+ RT RS T T + + L Sbjct: 71 -VETFSPYAR-QFLDRMDKPQVDRIEGVPPAIAIDQTNPVRTSRSTVGTMTELADHFKLL 128 Query: 715 FA 716 +A Sbjct: 129 YA 130 Score = 59.7 bits (143), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 39/119 (32%), Positives = 59/119 (49%), Gaps = 9/119 (7%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 63 I + GA HNL++I++ IP +L VVTG+SGSGKSSLA D ++A + R + + AR+ Sbjct: 1653 IRIEGANLHNLRDIDVRIPLARLTVVTGVSGSGKSSLARDVIHANLRARLGDPEATRARR 1712 Query: 64 FLSLMEKPDVDHIEGLSP---------AISIEQKSTSHNPRSTVGTITEIHDYLRLLFA 113 + + G + + ++Q PRS T D +R LFA Sbjct: 1713 RGQAQPEAVDQPLVGCAAMPGWHQVGRVLEVDQTPIGKTPRSCPATYVGFWDAIRKLFA 1771 Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 40/125 (32%), Positives = 65/125 (52%), Gaps = 23/125 (18%) Query: 3 KIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYAR 62 ++++ GAR HNL+++ + P +L +TG+SGSGKS+L D L+ A A+ Sbjct: 713 RLKLVGARQHNLRDLTVGFPLRRLTCLTGVSGSGKSTLIQDVLF-----------PALAK 761 Query: 63 QFLSLMEKPDV----DHIEGLSPAISIEQ----KSTSHNPRSTVGTITEIHDYLRLLFAR 114 F E P V ++++ L + ++Q KS+ NP S VG D +R LFA Sbjct: 762 HFGEAAESPGVFDRLENVDNLRGVVMVDQSPIGKSSRSNPVSYVGA----WDPIRALFAA 817 Query: 115 VGEPR 119 + E + Sbjct: 818 LPEAK 822 >UniRef50_D2AS77 Excinuclease ABC subunit A n=1 Tax=Streptosporangium roseum DSM 43021 RepID=D2AS77_STRRD Length = 880 Score = 496 bits (1277), Expect = e-138, Method: Compositional matrix adjust. Identities = 295/747 (39%), Positives = 406/747 (54%), Gaps = 65/747 (8%) Query: 245 LLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPELSLAG 304 +LFS A P L+ FS N P GACP C GLG + ++ +P LS+ Sbjct: 127 MLFSRAGAYPP---GAEHLDSDSFSPNTPIGACPHCHGLGRVHTVSEESLVPDPGLSIRE 183 Query: 305 GAIRGWDRRNFYYFQMLKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKENIEFKYMNDR 364 GA+ W + + + + DV+ PW L A + +L + + + D Sbjct: 184 GAVAAWP--GAWQGKNYRDILVELGVDVDRPWSELPAEQREWILMTDEQPVVTVHPVRDA 241 Query: 365 GDTSIRRHPFEGVLHNMER----RYKETESSAVREELAKFISNRPCASCEGTRLRREARH 420 G + ++G + R Y T+S+++R A+F+ + PC CEG RLR EA Sbjct: 242 GKVA---RDYQGTFSSARRYVLHTYATTKSASLRARAARFLLSSPCPVCEGRRLRPEALA 298 Query: 421 VYVENTPLPAISDMSIGHAMEFFNNLKLAGQ---------RAKIAEKILKEIGDRLKFLV 471 V + ++ + + E + AG RA+ A + + +R++ + Sbjct: 299 VRFAGRDITEMAALPLTELAEVLSGATRAGDLDAAGPPDARAEAAAALAGNLLERIRTMA 358 Query: 472 NVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTL 531 +GL YL+ RS TLS GE QR+RLA+Q+ +GL GV+YVLDEPS GLH D E LL + Sbjct: 359 ELGLGYLSTDRSTATLSSGELQRLRLATQLRSGLFGVLYVLDEPSAGLHPSDTEALLEAM 418 Query: 532 IHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQY 591 LR GN++ VVEH+ D +R AD ++D+GPGAG HGG V+ G + + V S T +Y Sbjct: 419 RRLRGAGNSLFVVEHNLDVMRQADWIVDVGPGAGEHGGRVLYSGEVAGLARVAGSATRRY 478 Query: 592 MSGKRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLIN 651 + + + R P L+L G +NL+D+ + P+G FT +TGVSGSGKSTL++ Sbjct: 479 LF--EQADRTGDRDARRPSGWLELRGITRHNLRDLDVRFPLGTFTAVTGVSGSGKSTLVS 536 Query: 652 DTLFPIAQRQL------------------------------------------NGATIAE 669 L + L +G+T E Sbjct: 537 QVLTGVVAEHLGADADDPGQLGAREGEDTGAGHEGGGGRAGPDGSTTFPGPGPDGSTPEE 596 Query: 670 PAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESRARGYTPG 729 + GLE +++ +DQ PIGRTPRSN ATYTG+F VR LFA PE+R GY G Sbjct: 597 VVTHVAATGLEPIRRLVRVDQRPIGRTPRSNLATYTGLFDAVRRLFAATPEARRHGYDAG 656 Query: 730 RFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKYKGKTIHEVL 789 RFSFNV GGRCE CQG G I +EM FLP PC C G RYN ETL + G++I +VL Sbjct: 657 RFSFNVPGGRCENCQGQGSIFIEMLFLPGATAPCPVCHGARYNPETLRVTVAGRSIADVL 716 Query: 790 DMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGT 849 DMT+E+AR+F VP R L+ L +VGL Y+RLGQ ATTLSGGEAQRVKLA EL + Sbjct: 717 DMTVEQARDFLREVPGAVRSLEVLSEVGLGYLRLGQPATTLSGGEAQRVKLASELQRVRR 776 Query: 850 GQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADWIVDLGPEGG 909 G TLY+LDEPT+GLH AD+ L+ L L GNT+V++EH++DV+ DW++DLGP GG Sbjct: 777 GHTLYVLDEPTSGLHPADVDLLVAQLRGLVAAGNTVVLVEHDMDVVAGTDWVIDLGPGGG 836 Query: 910 SGGGEILVSGTPETVAECEASHTARFL 936 GG ++ +G P VA S TA +L Sbjct: 837 EAGGRVVAAGPPHVVAGARDSATAPYL 863 Score = 123 bits (308), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 56/113 (49%), Positives = 83/113 (73%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 63 I VR AR HNL+++++ PRD++++ TG+SGSGKSSLAF T+YAE QRRY+ES++ YAR+ Sbjct: 21 IRVRDAREHNLRHVDVEAPRDRIVLFTGVSGSGKSSLAFGTVYAEAQRRYLESVTPYARR 80 Query: 64 FLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVG 116 + + P V I GL PA+++ Q + RS+VGT+T + + LR+LF+R G Sbjct: 81 LIEQVGAPKVGDITGLPPAVALRQARGGGSARSSVGTVTHLSNVLRMLFSRAG 133 Score = 107 bits (266), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 75/190 (39%), Positives = 100/190 (52%), Gaps = 15/190 (7%) Query: 405 PCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIG 464 PC C G R E V V + + DM++ A +F + A + Sbjct: 689 PCPVCHGARYNPETLRVTVAGRSIADVLDMTVEQARDFLREVPGAVRS------------ 736 Query: 465 DRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVG-VMYVLDEPSIGLHQRD 523 L+ L VGL YL L + A TLSGGEAQR++LAS++ G +YVLDEP+ GLH D Sbjct: 737 --LEVLSEVGLGYLRLGQPATTLSGGEAQRVKLASELQRVRRGHTLYVLDEPTSGLHPAD 794 Query: 524 NERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAV 583 + L+ L L GNTV++VEHD D + D VID+GPG G GG VVA GP + Sbjct: 795 VDLLVAQLRGLVAAGNTVVLVEHDMDVVAGTDWVIDLGPGGGEAGGRVVAAGPPHVVAGA 854 Query: 584 PESLTGQYMS 593 +S T Y++ Sbjct: 855 RDSATAPYLA 864 Score = 52.8 bits (125), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 52/171 (30%), Positives = 74/171 (43%), Gaps = 34/171 (19%) Query: 610 EKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAE 669 + ++++ AR +NL+ V + P TGVSGSGKS+L T++ AQR+ + Sbjct: 18 DPMIRVRDAREHNLRHVDVEAPRDRIVLFTGVSGSGKSSLAFGTVYAEAQRRY----LES 73 Query: 670 PAPYR-------------DIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFA 716 PY DI GL + + Q+ G + RS+ T T + +R LF Sbjct: 74 VTPYARRLIEQVGAPKVGDITGLP---PAVALRQARGGGSARSSVGTVTHLSNVLRMLF- 129 Query: 717 GVPESRARGYTPG-------RFSFNVRGGRCEACQGDGVIKV--EMHFLPD 758 SRA Y PG FS N G C C G G + E +PD Sbjct: 130 ----SRAGAYPPGAEHLDSDSFSPNTPIGACPHCHGLGRVHTVSEESLVPD 176 >UniRef50_A9U6S5 Predicted protein (Fragment) n=6 Tax=cellular organisms RepID=A9U6S5_PHYPA Length = 804 Score = 495 bits (1274), Expect = e-138, Method: Compositional matrix adjust. Identities = 243/455 (53%), Positives = 324/455 (71%), Gaps = 4/455 (0%) Query: 272 NPAGACPTCDGLGVQQYFDPDRVIQNPELSLAGGAIRGWD-RRNFYYFQMLKSLADHYKF 330 +P GACP CDGLGV+ DP+ +I + E S+ GA W + YY Q LKS+ +HY Sbjct: 352 DPFGACPECDGLGVKMIVDPELLIPDREKSIDDGAFLAWTGSTSNYYPQFLKSVCEHYNI 411 Query: 331 DVEAPWGSLSANVHKVVLYGSGKENIEFKYMNDRGDTSIRRHPFEGVLHNMERRYKETES 390 P L +LYG+G + + F+Y ND G FEGV+ N+ERRY+ET S Sbjct: 412 PQNVPVSQLKEEDMNKLLYGTGNQKVRFRYENDFGQRKEAFVVFEGVIPNLERRYRETAS 471 Query: 391 SAVREELAKFISNRPCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAG 450 +RE + F+S +PC C+G RL++E V V + + ++ +SIG AM+ F+ L+L+ Sbjct: 472 EGIREFIENFMSAKPCEVCKGHRLKKEVLAVTVNDYNMAHVTSLSIGEAMKLFDQLELSE 531 Query: 451 QRAKIAEKILKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMY 510 + IA ILKEI RL FLVNVGL+YLTLSR+A TLSGGEAQRIRLA+QIG+ L+GV+Y Sbjct: 532 KERSIANLILKEINARLGFLVNVGLDYLTLSRAAGTLSGGEAQRIRLATQIGSSLMGVLY 591 Query: 511 VLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGE 570 +LDEPSIGLHQRDN+RL+ TL H+RD+GNT+IVVEHDED + AAD++IDIGPGAG+HGG Sbjct: 592 ILDEPSIGLHQRDNDRLISTLEHMRDIGNTLIVVEHDEDTMMAADYIIDIGPGAGIHGGR 651 Query: 571 VVAEGPLEAIMAVPESLTGQYMSGKRKIEV-PKKRVPANPEKVLKLTGARGNNLKDVTLT 629 V+A+G E IM P SLTGQY+SG++ I V ++R P N + L++ GA+ NNLK++ Sbjct: 652 VIAQGTPEEIMKDPNSLTGQYLSGRKFIPVNTERRKPDN--RWLEIRGAKENNLKNINAK 709 Query: 630 LPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDID 689 +PVG+FT +TGVSGSGKSTL+N+ L+ R+LN A P +++I+GLEH +KVIDID Sbjct: 710 IPVGVFTAVTGVSGSGKSTLVNEILYKTLARELNKAVKVRPGQHKEIRGLEHLEKVIDID 769 Query: 690 QSPIGRTPRSNPATYTGVFTPVRELFAGVPESRAR 724 QSPIGRTPRSNPATYTGVF +R+++A E++ R Sbjct: 770 QSPIGRTPRSNPATYTGVFDDIRDIYAQTNEAKIR 804 Score = 137 bits (344), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 72/189 (38%), Positives = 109/189 (57%), Gaps = 15/189 (7%) Query: 762 PCDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAV--------------PALA 807 PC+ CKG R +E L + + V ++I EA + FD + + Sbjct: 486 PCEVCKGHRLKKEVLAVTVNDYNMAHVTSLSIGEAMKLFDQLELSEKERSIANLILKEIN 545 Query: 808 RKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFAD 867 +L L++VGL Y+ L ++A TLSGGEAQR++LA ++ G LYILDEP+ GLH D Sbjct: 546 ARLGFLVNVGLDYLTLSRAAGTLSGGEAQRIRLATQIGSSLMG-VLYILDEPSIGLHQRD 604 Query: 868 IQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAEC 927 +L+ L +RD GNT++V+EH+ D + AD+I+D+GP G GG ++ GTPE + + Sbjct: 605 NDRLISTLEHMRDIGNTLIVVEHDEDTMMAADYIIDIGPGAGIHGGRVIAQGTPEEIMKD 664 Query: 928 EASHTARFL 936 S T ++L Sbjct: 665 PNSLTGQYL 673 Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 40/116 (34%), Positives = 60/116 (51%), Gaps = 6/116 (5%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 63 +E+RGA+ +NLKNIN IP VTG+SGSGKS+L + LY R +++ Q Sbjct: 693 LEIRGAKENNLKNINAKIPVGVFTAVTGVSGSGKSTLVNEILYKTLARELNKAVKVRPGQ 752 Query: 64 FLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPR 119 ++ +E L I I+Q PRS T T + D +R ++A+ E + Sbjct: 753 ------HKEIRGLEHLEKVIDIDQSPIGRTPRSNPATYTGVFDDIRDIYAQTNEAK 802 >UniRef50_A5LJ87 Excinuclease ABC subunit A n=13 Tax=Bacilli RepID=A5LJ87_STRPN Length = 525 Score = 494 bits (1271), Expect = e-138, Method: Compositional matrix adjust. Identities = 254/495 (51%), Positives = 336/495 (67%), Gaps = 7/495 (1%) Query: 2 DKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYA 61 DKI + GAR HNLKNI++ IPRDKL+VVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYA Sbjct: 3 DKIVIHGARAHNLKNIDVEIPRDKLVVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYA 62 Query: 62 RQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCP 121 RQFL MEKPDVD I+GLSPAISI+QK+TS NPRSTVGT TEI+DYLRLL+ARVG P C Sbjct: 63 RQFLGNMEKPDVDAIDGLSPAISIDQKTTSKNPRSTVGTTTEINDYLRLLYARVGTPYCI 122 Query: 122 DHDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARIDG 181 + + A +V Q+VD VL PE +RL +LAP+I+++KG+H +E + GY+R R+DG Sbjct: 123 NGHGAINASSVEQIVDKVLELPERQRLQILAPVIRKKKGQHKSVIEKVQKDGYVRVRVDG 182 Query: 182 EVCDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVADMDDPK 241 EV D+++ P+L K+H I+VVVDR +++ + RL +S E AL ++ G ++ MDD Sbjct: 183 EVYDVTEVPELSKSKQHNIDVVVDRIVIKEGIRSRLFDSIEAALRIAEGYVIIDTMDD-- 240 Query: 242 AEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPELS 301 ELLFS ++ACP+CG+++ ELEPRLFSFN P G+C CDGLG++ D D V+ + + Sbjct: 241 -SELLFSEHYACPVCGFTVPELEPRLFSFNAPFGSCSECDGLGIKLEVDTDLVVPDASKT 299 Query: 302 LAGGAIRGWDR-RNFYYFQMLKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKENIEFKY 360 L GA+ W+ + YY ML+ + ++ P+ LS ++LYGS + F Y Sbjct: 300 LREGALAPWNPISSNYYPNMLEQAMKVFGVAMDKPFEDLSEEDKNLILYGSDGKEFHFHY 359 Query: 361 MNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGTRLRREARH 420 N+ G PFEGV++N++RRY ET S R ++ +++ C +C+G RL +A Sbjct: 360 ENEFGGVRDIDIPFEGVINNIKRRYHETNSDYTRTQMRLYMNELTCGTCQGYRLNDQALS 419 Query: 421 VYVENTPLP---AISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNVGLNY 477 V V P ISD+SI ++ + L L+ A IA ILKEI DRL FL NVGLNY Sbjct: 420 VRVGGQQGPHIGEISDLSIADHLDLVSQLTLSENEAIIARPILKEIKDRLTFLNNVGLNY 479 Query: 478 LTLSRSAETLSGGEA 492 LTLSRSA T G++ Sbjct: 480 LTLSRSAGTFQVGKS 494 Score = 59.7 bits (143), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 36/110 (32%), Positives = 56/110 (50%), Gaps = 6/110 (5%) Query: 615 LTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAEPAPYR 674 + GAR +NLK++ + +P +TG+SGSGKS+L DTL+ QR+ + A + Sbjct: 7 IHGARAHNLKNIDVEIPRDKLVVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQFL 66 Query: 675 ------DIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGV 718 D+ ++ I IDQ + PRS T T + +R L+A V Sbjct: 67 GNMEKPDVDAIDGLSPAISIDQKTTSKNPRSTVGTTTEINDYLRLLYARV 116 >UniRef50_C3RJK4 Excinuclease ABC subunit A n=2 Tax=Bacteria RepID=C3RJK4_9MOLU Length = 798 Score = 491 bits (1265), Expect = e-137, Method: Compositional matrix adjust. Identities = 265/693 (38%), Positives = 397/693 (57%), Gaps = 34/693 (4%) Query: 247 FSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPELSLAGGA 306 F+ C C Y M +L FSFN+ GACPTC GLG + D+V++ P LSL GA Sbjct: 137 FTVYMYCNYCHYKMEKLTRSHFSFNSEKGACPTCFGLGKTLILNLDKVLE-PNLSLREGA 195 Query: 307 IRGWDRR-NFYYFQMLKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKENIEFKYMNDRG 365 + W R Y + L+ + V + N + V+ G E+ +FK + + Sbjct: 196 VAFWHHRYKEYQIEQLEKVYRELGLSVTPETKVIDFNQQQRVILLYGTESKQFKELFGK- 254 Query: 366 DTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGTRLRREARHVYVEN 425 I+ FEG++ N+ RR +E ++ + +E++ + + C C G +L +R + V Sbjct: 255 ---IKISKFEGIITNLWRRVEEKKNQS--KEISSYFDEQVCPDCHGEKLNSLSRQITVNK 309 Query: 426 TPLPAISDMSIGHAMEFFNNLK--LAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTLSRS 483 T + A + M + + + L+ ++G + + ++ + ++ +++ ++NVGL YL L R Sbjct: 310 TVITATTKMPLTELLHWLEQLEATVSGPQKEAVQQYIIDLKTKIQRIINVGLGYLHLDRQ 369 Query: 484 AETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIV 543 TLSGGE QRI+LA+ + + L G++Y+ DEP++GLH +D ++ L LRD NTVIV Sbjct: 370 TMTLSGGEKQRIKLAAALQSQLTGIIYIFDEPTMGLHPKDTAGIINVLKELRDQENTVIV 429 Query: 544 VEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEVPKK 603 +EHD D I+AAD++ID+GPGAG HGG+++A G + P S+TGQY K+K K Sbjct: 430 IEHDLDVIKAADYLIDLGPGAGKHGGQILALGTYHELQNNPSSITGQYFVNKKKC----K 485 Query: 604 RVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLN 663 RV + ++ A +NLK++ +T V +TGVSGSGKSTL+ F + +Q Sbjct: 486 RVYRTSNRYFEVKNAHVHNLKNIDVTFLVDCLNVVTGVSGSGKSTLV----FAVLAKQ-- 539 Query: 664 GATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESRA 723 YR +FD +I + Q I T RSN ATYTG++ +R+LF + ++ Sbjct: 540 --------HYR------YFDDIIAVRQESITTTRRSNIATYTGIYDEIRKLFGSLEATKE 585 Query: 724 RGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKYKGK 783 G+T FSFN +GGRCE C+G G + M F D+ V C C+GKR+ E L +KY Sbjct: 586 MGFTAKHFSFNSQGGRCENCEGLGTVTSNMLFFKDVEVVCPVCQGKRFIPEILALKYHEH 645 Query: 784 TIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARE 843 +I +VL ++++E FF P + + L+ L DVGL Y+ LGQ TTLSGGE QR+KLA Sbjct: 646 SIDDVLHLSVDEGVGFFSDCPKIIKTLKMLQDVGLGYLELGQVLTTLSGGEKQRLKLATT 705 Query: 844 LSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADWIVD 903 L LY++DEPT GLH DI+ LL +L ++ D GNT+V++EHN +I ADWIVD Sbjct: 706 LLTNINKHNLYLIDEPTIGLHPLDIEHLLLLLDRIVDSGNTVVIVEHNQQIINAADWIVD 765 Query: 904 LGPEGGSGGGEILVSGTPETVAECEASHTARFL 936 LGP GG+ GG ++ +GTP + E S FL Sbjct: 766 LGPAGGNDGGYVIAAGTPNDIKGNENSIIGEFL 798 Score = 116 bits (290), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 55/121 (45%), Positives = 85/121 (70%), Gaps = 6/121 (4%) Query: 1 MDKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAY 60 M I ++ A NLKN++L IPR+KL+V+TGLSGSGKS+LA D LY E QR+Y+E++S Sbjct: 1 MKDIIIKNAYHGNLKNLDLTIPRNKLVVITGLSGSGKSTLAIDVLYQECQRQYLEAISFQ 60 Query: 61 ARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRC 120 + KP V+ I +SPA+ I Q ++NPRS++GT+T+I+ +R+++ ++G +C Sbjct: 61 G------INKPGVEVIRNVSPAVVITQDEKNNNPRSSLGTVTDIYTDIRMIYEKLGVRKC 114 Query: 121 P 121 P Sbjct: 115 P 115 Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 39/112 (34%), Positives = 55/112 (49%), Gaps = 26/112 (23%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 63 EV+ A HNLKNI++ D L VVTG+SGSGKS+L F L A+ RY + + Sbjct: 495 FEVKNAHVHNLKNIDVTFLVDCLNVVTGVSGSGKSTLVFAVL-AKQHYRYFDDI------ 547 Query: 64 FLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARV 115 I++ Q+S + RS + T T I+D +R LF + Sbjct: 548 -------------------IAVRQESITTTRRSNIATYTGIYDEIRKLFGSL 580 Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 34/105 (32%), Positives = 53/105 (50%) Query: 611 KVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAEP 670 K + + A NLK++ LT+P ITG+SGSGKSTL D L+ QRQ A + Sbjct: 2 KDIIIKNAYHGNLKNLDLTIPRNKLVVITGLSGSGKSTLAIDVLYQECQRQYLEAISFQG 61 Query: 671 APYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELF 715 ++ + + + I Q PRS+ T T ++T +R ++ Sbjct: 62 INKPGVEVIRNVSPAVVITQDEKNNNPRSSLGTVTDIYTDIRMIY 106 >UniRef50_B2T6A1 Excinuclease ABC, A subunit n=34 Tax=Bacteria RepID=B2T6A1_BURPP Length = 950 Score = 486 bits (1252), Expect = e-135, Method: Compositional matrix adjust. Identities = 280/749 (37%), Positives = 396/749 (52%), Gaps = 81/749 (10%) Query: 268 FSFNNPAGACPTCDGLGVQQYFDPDRVIQNPELSLAGGAIRGWDRRNFYYFQMLKSLADH 327 FS N GACPTC GLG ++ + L++ AI W ++ Q L+ + Sbjct: 205 FSPNTVQGACPTCHGLGRVYEVTEKSMVPDDSLTIRERAIAAWP--PAWHGQNLRDILVT 262 Query: 328 YKFDVEAPWGSLSANVHKVVLYGSGKENI---------EFKYMNDRGDTSIRRHPFEGVL 378 +DV+ PW L +L+ + + E + R D + F G Sbjct: 263 LGYDVDKPWRDLPKKDRDWILFTDEQPTVPVYAGLTPKETRAALRRKDEPSYQGTFTGAR 322 Query: 379 HNMERRYKETESSAVREELAKFISNRPCASCEGTRLRREARHVYVE--------NTPLPA 430 + + T+S+ +++ +++F+ C +C G RL++EA V PL Sbjct: 323 RYVLHTFANTQSALMKKRVSRFMIGSVCPTCHGKRLKKEALSVKFAGLDIGEFAQLPLAR 382 Query: 431 ISDM------------SIGH---------------------------------AMEFFNN 445 +++M +GH A + Sbjct: 383 LAEMLAPIARGEWPEPDVGHSGKDPGKGSVLSKNAMRDAVDKRVAAGGSAHKAAPDVRRT 442 Query: 446 LKLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGL 505 L+ ++ A++I E+ +RL LV++GL YL L RS TLS GE QR+RLA+Q+ + L Sbjct: 443 PNLSEEKRVAAQRIAAELLERLTTLVDLGLGYLALERSTPTLSSGELQRLRLATQLSSQL 502 Query: 506 VGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAG 565 GV+YVLDEPS GLH D E L L L+ GN++ VVEHD +R AD ++D+GP AG Sbjct: 503 FGVVYVLDEPSAGLHPADGEALFSALQSLKAAGNSLFVVEHDLQMMRRADWLVDVGPAAG 562 Query: 566 VHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEVPKKRVPANPEKVLKLTGARGNNLKD 625 GG VV GP + V S T +++ P R P L+L G NNL Sbjct: 563 EAGGHVVYSGPPAGLAKVEASHTRRHLFAP---PAPVARATREPAGWLRLAGITRNNLHG 619 Query: 626 VTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNG--------------ATIAEPA 671 + P+G T +TGVSGSGKS+L++ L + L AT + P Sbjct: 620 LDAAFPLGCLTAVTGVSGSGKSSLVSQALPELVASHLGRVFENPDDDEQDPLLATASAPT 679 Query: 672 PYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESRARGYTPGRF 731 R +G++ +++ +DQ PIGRTPRSN ATYTG+F VR+LFA P +R R Y GRF Sbjct: 680 SGRIAEGMDALRRLVRVDQKPIGRTPRSNLATYTGLFDHVRKLFADTPLARKRRYGAGRF 739 Query: 732 SFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKYKGKTIHEVLDM 791 SFNV GRC C+G+G + VE+ FLP +Y PC C G RYN +TLE+ ++ K I EVL + Sbjct: 740 SFNVAQGRCPTCEGEGFVSVELLFLPSVYAPCSTCHGTRYNTQTLEVTWRDKNIAEVLGL 799 Query: 792 TIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQ 851 T++ A +FF ++ R L+ L D+GL Y+RLGQ AT LSGGEAQR+KLA EL + G Sbjct: 800 TVDAACDFFADEASVMRALKVLRDIGLGYLRLGQPATELSGGEAQRIKLATELQRAQRGD 859 Query: 852 TLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADWIVDLGPEGGSG 911 TLYILDEPTTGLH AD+ +L+ L L D GNT+VV+EH++ V +DW+VD+GP G Sbjct: 860 TLYILDEPTTGLHPADVDRLMVQLQGLVDAGNTVVVVEHDMRVASQSDWVVDVGPGAGDA 919 Query: 912 GGEILVSGTPETVAECEASHTARFLKPML 940 GG+I+ SGTP + + S TA +L+ L Sbjct: 920 GGKIVASGTPAEILRVKESRTAEYLRQHL 948 Score = 136 bits (343), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 64/120 (53%), Positives = 92/120 (76%), Gaps = 2/120 (1%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 63 + VRGAR HNLKNI++ IPRD L+V TG+SGSGKSSLAF TLYAE QRRY ES++ YAR+ Sbjct: 79 VRVRGAREHNLKNIDVQIPRDALVVFTGVSGSGKSSLAFGTLYAEAQRRYFESVAPYARR 138 Query: 64 FLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGE--PRCP 121 + + P+VD IEGL PA++++Q+ + + RS+VG++T + +R+L++R G+ P+ P Sbjct: 139 LIEQVGVPEVDAIEGLPPAVALQQQRGTPSARSSVGSVTTLSSLVRMLYSRTGDYPPKQP 198 Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 48/165 (29%), Positives = 73/165 (44%), Gaps = 28/165 (16%) Query: 613 LKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAEPAP 672 +++ GAR +NLK++ + +P TGVSGSGKS+L TL+ AQR+ AP Sbjct: 79 VRVRGAREHNLKNIDVQIPRDALVVFTGVSGSGKSSLAFGTLYAEAQRRY----FESVAP 134 Query: 673 YR----------DIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESR 722 Y ++ +E + + Q + RS+ + T + + VR L+ SR Sbjct: 135 YARRLIEQVGVPEVDAIEGLPPAVALQQQRGTPSARSSVGSVTTLSSLVRMLY-----SR 189 Query: 723 ARGYTPGR-------FSFNVRGGRCEACQGDGVIK--VEMHFLPD 758 Y P + FS N G C C G G + E +PD Sbjct: 190 TGDYPPKQPMLFAEDFSPNTVQGACPTCHGLGRVYEVTEKSMVPD 234 Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust. Identities = 41/133 (30%), Positives = 58/133 (43%), Gaps = 18/133 (13%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSL---AFDTLYAEGQRRYVESLSAY 60 + + G +NL ++ P L VTG+SGSGKSSL A L A R E+ Sbjct: 607 LRLAGITRNNLHGLDAAFPLGCLTAVTGVSGSGKSSLVSQALPELVASHLGRVFENPDDD 666 Query: 61 ARQ-FLSLMEKPDVDHI----EGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARV 115 + L+ P I + L + ++QK PRS + T T + D++R LFA Sbjct: 667 EQDPLLATASAPTSGRIAEGMDALRRLVRVDQKPIGRTPRSNLATYTGLFDHVRKLFA-- 724 Query: 116 GEPRCPDHDVPLA 128 D PLA Sbjct: 725 --------DTPLA 729 >UniRef50_C7FPB9 Excinuclease ATPase subunit n=1 Tax=uncultured bacterium HF186_75m_14K15 RepID=C7FPB9_9BACT Length = 798 Score = 486 bits (1251), Expect = e-135, Method: Compositional matrix adjust. Identities = 258/534 (48%), Positives = 350/534 (65%), Gaps = 11/534 (2%) Query: 405 PCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIG 464 PC +C+G RL R V LP M+ +E + L+L + A +AE + I Sbjct: 267 PCPACDGERLGPLGRRVRFGGRRLPEYLKMTPPELIEALSGLELDARGALVAEGPVTAII 326 Query: 465 DRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDN 524 +R +FLV+VGL+YL+L RS +LSGGEAQRIRLA+Q+GA L GV+YVLDEP+IGLH D Sbjct: 327 ERARFLVDVGLDYLSLDRSVRSLSGGEAQRIRLAAQLGAHLSGVLYVLDEPTIGLHPTDT 386 Query: 525 ERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVP 584 E LL L L+ GN V++VEHDE +R AD ++DIGPGAG GGE++ PL+ + P Sbjct: 387 EVLLKALDRLQGRGNGVLMVEHDEATLRTADVLVDIGPGAGSEGGELLVAAPLDEALRHP 446 Query: 585 ESLTGQYMSGKRK--IEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVS 642 SLTG + +R E P+ P + ++LTG NL V LTLP G + +TGVS Sbjct: 447 RSLTGACLRRERPPVAEAPR---PLDDVTFIRLTGVTHRNLSGVDLTLPRGRLSVVTGVS 503 Query: 643 GSGKSTLINDTLFPIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPA 702 GSGKS+L++D L + + + +GL+ +VI +D PIG+ PRS PA Sbjct: 504 GSGKSSLVHDVLAKAIEPHRGAGS------WEHAEGLDGLTRVIRVDDKPIGKNPRSIPA 557 Query: 703 TYTGVFTPVRELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVP 762 TY GV+ +R+LFA +P +R RG++P RFSFNV+GGRCEAC G G +K+EM FLPD Y P Sbjct: 558 TYIGVWDAIRKLFARLPNARLRGFSPSRFSFNVKGGRCEACAGQGQVKLEMSFLPDAYSP 617 Query: 763 CDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIR 822 CD C GKR+N +TL++ Y G +IH+VL+M + +A F+ VP + R L+ L DVGL Y++ Sbjct: 618 CDTCGGKRFNTQTLQVTYDGHSIHDVLEMPVRDALALFERVPKIQRALKLLEDVGLGYLK 677 Query: 823 LGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQG 882 LGQ +TTLSGGEAQR+KL L R TL +LDEP+ GLH AD+ +LL V+H+L D G Sbjct: 678 LGQPSTTLSGGEAQRIKLVSHLIGRKRPDTLIVLDEPSIGLHMADVPKLLAVVHRLVDAG 737 Query: 883 NTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFL 936 T+VVIEHN+DV++ ADW++DLGP GG GG ++ G E +A+ S T ++L Sbjct: 738 TTVVVIEHNVDVVREADWVIDLGPGGGPEGGRVMYQGPFEGLADAPDSRTGQWL 791 Score = 139 bits (351), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 92/259 (35%), Positives = 138/259 (53%), Gaps = 17/259 (6%) Query: 32 LSGSGKSSLAFDTLYAEGQRRYVESLSAYARQFLSLMEKPDVDHIEGLSPAISIEQKSTS 91 +SGSGKS+LAFD ++AEGQRR+++ +S YARQ+++ + +PD I G+ P ++IEQ++T Sbjct: 1 MSGSGKSTLAFDIVFAEGQRRFLDCVSPYARQYITQLGRPDAARIAGIPPTVAIEQRTTR 60 Query: 92 HNPRSTVGTITEIHDYLRLLFARVGEPRCPDHDVPLAAQTVSQMVDNVL----SQPEGKR 147 RS V TEI +LRLLFAR+G + LAA + L + PE + Sbjct: 61 GGARSVVANATEISAFLRLLFARLGVDQ-------LAASRRRSPEELALYLEEAYPE-RE 112 Query: 148 LMLLAPIIKERKGEHTKTLENLASQGYIRARIDGEVCDLSDPPKLELQKKHTIEVVVDRF 207 L + AP I RKG H A G+ +DG + + P+L + H+I+++ R Sbjct: 113 LAICAPAISARKGFHKPVFRRAAMMGHTEILVDGVIMPPAPTPRLRRSRLHSIDMIFGR- 171 Query: 208 KVRDDLTQRLAESFETALELSGGTAVVADMDDPKAEELLFSANFACPICGYSMR-ELEPR 266 + DD +R + E A + GG V + E+L P+ + R + +PR Sbjct: 172 TMSDD-RERAEDMIERASAMGGGRVRVL-LGQGSVPEVLGPFEV-VPLESHVRRQQFDPR 228 Query: 267 LFSFNNPAGACPTCDGLGV 285 FS + GACPTC G GV Sbjct: 229 AFSPHTTLGACPTCGGAGV 247 Score = 127 bits (318), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 81/218 (37%), Positives = 119/218 (54%), Gaps = 23/218 (10%) Query: 722 RARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDI-------YVPCDQCKGKRYNRE 774 R + + P FS + G C C G GV++ E D YVPC C G+R Sbjct: 221 RRQQFDPRAFSPHTTLGACPTCGGAGVLE-EALLASDKGKDTERRYVPCPACDGERLGPL 279 Query: 775 TLEIKYKGKTIHEVLDMTIEEAREFFDA--------------VPALARKLQTLMDVGLTY 820 +++ G+ + E L MT E E V A+ + + L+DVGL Y Sbjct: 280 GRRVRFGGRRLPEYLKMTPPELIEALSGLELDARGALVAEGPVTAIIERARFLVDVGLDY 339 Query: 821 IRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRD 880 + L +S +LSGGEAQR++LA +L +G LY+LDEPT GLH D + LL L +L+ Sbjct: 340 LSLDRSVRSLSGGEAQRIRLAAQLGAHLSG-VLYVLDEPTIGLHPTDTEVLLKALDRLQG 398 Query: 881 QGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVS 918 +GN ++++EH+ ++TAD +VD+GP GS GGE+LV+ Sbjct: 399 RGNGVLMVEHDEATLRTADVLVDIGPGAGSEGGELLVA 436 Score = 119 bits (298), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 79/190 (41%), Positives = 106/190 (55%), Gaps = 15/190 (7%) Query: 405 PCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIG 464 PC +C G R + V + + + +M + A+ F + QRA Sbjct: 617 PCDTCGGKRFNTQTLQVTYDGHSIHDVLEMPVRDALALFERVPKI-QRA----------- 664 Query: 465 DRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQ-IGAGLVGVMYVLDEPSIGLHQRD 523 LK L +VGL YL L + + TLSGGEAQRI+L S IG + VLDEPSIGLH D Sbjct: 665 --LKLLEDVGLGYLKLGQPSTTLSGGEAQRIKLVSHLIGRKRPDTLIVLDEPSIGLHMAD 722 Query: 524 NERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAV 583 +LL + L D G TV+V+EH+ D +R AD VID+GPG G GG V+ +GP E + Sbjct: 723 VPKLLAVVHRLVDAGTTVVVIEHNVDVVREADWVIDLGPGGGPEGGRVMYQGPFEGLADA 782 Query: 584 PESLTGQYMS 593 P+S TGQ++S Sbjct: 783 PDSRTGQWLS 792 Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 39/116 (33%), Positives = 56/116 (48%), Gaps = 12/116 (10%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 63 I + G NL ++L +PR +L VVTG+SGSGKSSL D L + +A Sbjct: 474 IRLTGVTHRNLSGVDLTLPRGRLSVVTGVSGSGKSSLVHDVLAKAIEPHRGAGSWEHA-- 531 Query: 64 FLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPR 119 + ++GL+ I ++ K NPRS T + D +R LFAR+ R Sbjct: 532 ----------EGLDGLTRVIRVDDKPIGKNPRSIPATYIGVWDAIRKLFARLPNAR 577 >UniRef50_B2UL01 Excinuclease ABC, A subunit n=1 Tax=Akkermansia muciniphila ATCC BAA-835 RepID=B2UL01_AKKM8 Length = 833 Score = 484 bits (1247), Expect = e-135, Method: Compositional matrix adjust. Identities = 262/553 (47%), Positives = 365/553 (66%), Gaps = 29/553 (5%) Query: 403 NRPCASCEGTRLRREARHVYV----------ENTPLPAISDMSIGHAMEFFNNLKLAGQR 452 N PC +C G RL A V + E T LP + DM+ LK Sbjct: 292 NGPCRACGGQRLSPLALAVTMPAPDRAYNLAELTALP-LEDMA-----GELERLKTPPSL 345 Query: 453 AKIAEKILKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVL 512 A +++EI R++FL +GL+YL+L R A TLSGGE QR RLASQ+G GL GV+Y+L Sbjct: 346 AAALTPLMEEINKRVRFLNELGLSYLSLDRQANTLSGGELQRARLASQLGGGLSGVLYIL 405 Query: 513 DEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVV 572 DEP+ GLH D +RLL L LR+ GNTV+VVEHDE + AADH++D+GPG+G +GG ++ Sbjct: 406 DEPTAGLHPADTDRLLRALRTLRNQGNTVLVVEHDEQILTAADHLVDMGPGSGTNGGRIL 465 Query: 573 AEGPLEAIMAVPESLTGQYMSGKRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPV 632 A+G L I+ S TG+++SGKR + ++ P L LTGA +NL +VTL +PV Sbjct: 466 AQGSLAEILGNSGSPTGEWLSGKRNMPASGRKT--APAGRLVLTGADKHNLNNVTLNIPV 523 Query: 633 GLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSP 692 G TCI+G SGSGKSTL+ D L P ++ L+G + R +QG EHF++++ IDQSP Sbjct: 524 GTLTCISGPSGSGKSTLVRDCLIPAVRQDLSG----KKGIPRRVQGTEHFNRLVVIDQSP 579 Query: 693 IGRTPRSNPATYTGVFTPVRELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVE 752 IG+TPRS PAT TG+ +R L+A +P S+ RGYT RFS N+RGGRCE CQG G+I+V+ Sbjct: 580 IGKTPRSTPATATGLLQVLRPLYAQLPLSKQRGYTAARFSPNIRGGRCERCQGTGMIEVD 639 Query: 753 MHFLPDIYVPCDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQT 812 M+FL ++ +PCD C+G+ YNRETLE+ +KGK+I + L +T++EA EFF ++P A L++ Sbjct: 640 MNFLGNVAMPCDACQGQCYNRETLEVTWKGKSIAQALALTVDEAAEFFSSLPRAAAILKS 699 Query: 813 LMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQ-------TLYILDEPTTGLHF 865 + DVGL Y+ L + A TLSGGE+QR+K+A EL+K + L+ILDEPT+GLHF Sbjct: 700 MQDVGLGYLNLNRRADTLSGGESQRIKIAAELAKAPAWKLEEDGKRALFILDEPTSGLHF 759 Query: 866 ADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVA 925 ++ LL L +LRD G+TI+ +EH+ D++ AD++VD+GP G GG I+ G+P VA Sbjct: 760 NEVALLLAALFRLRDAGHTILCVEHHKDLLNAADYLVDMGPGAGRHGGNIVAEGSPADVA 819 Query: 926 ECEASHTARFLKP 938 + T+ +L P Sbjct: 820 SNPEAPTSPWLVP 832 Score = 206 bits (525), Expect = 3e-51, Method: Compositional matrix adjust. Identities = 122/307 (39%), Positives = 182/307 (59%), Gaps = 16/307 (5%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 63 I +RGAR HNL+N+NL +P +KLIV G SGSGKSSLAFDTL++E +RR+++ LSA +RQ Sbjct: 5 ISIRGARQHNLRNLNLDLPSNKLIVFCGPSGSGKSSLAFDTLFSESRRRFLDCLSARSRQ 64 Query: 64 FLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCPDH 123 + EKP+VD I GL PA+ +EQ + + R+ +G+ITEI DYLR+L+A G P P+ Sbjct: 65 GMDQPEKPEVDSITGLPPALCLEQSARQQSSRTLLGSITEILDYLRILYAAAGTPHDPET 124 Query: 124 DVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARIDGEV 183 L ++ ++ + ++S PE RL+L AP + TL + QG++R +GE+ Sbjct: 125 GKELERKSPDRITEELVSLPEHTRLILTAPAENLLAQDPAATLADFQRQGFLRVYWNGEM 184 Query: 184 CDLSD-----PPKLELQKKHTIEVVVDRFKVR-DDLTQRLAESFETALELSGGTAVVADM 237 D+ + PP + +V+DR VR ++ R+A+S +TAL ++ V A + Sbjct: 185 RDIEEISSPVPPPPD------AALVIDRLIVRGENTASRIADSLQTALRIN-PDEVRAII 237 Query: 238 DDPKAEELL--FSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGV-QQYFDPDRV 294 P E + F + P G+ + +L PR FSFN+P GACP+C G G+ +Q P R Sbjct: 238 TIPGEEASIRAFHTRYRNPETGFLLPQLTPRHFSFNSPLGACPSCRGTGLNEQENGPCRA 297 Query: 295 IQNPELS 301 LS Sbjct: 298 CGGQRLS 304 Score = 124 bits (311), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 84/229 (36%), Positives = 119/229 (51%), Gaps = 26/229 (11%) Query: 727 TPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKY----KG 782 TP FSFN G C +C+G G+ + E PC C G+R + L + + Sbjct: 266 TPRHFSFNSPLGACPSCRGTGLNEQENG-------PCRACGGQRLSPLALAVTMPAPDRA 318 Query: 783 KTIHEVLDMTIEEAR---EFFDAVPALARKLQTLM-----------DVGLTYIRLGQSAT 828 + E+ + +E+ E P+LA L LM ++GL+Y+ L + A Sbjct: 319 YNLAELTALPLEDMAGELERLKTPPSLAAALTPLMEEINKRVRFLNELGLSYLSLDRQAN 378 Query: 829 TLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVI 888 TLSGGE QR +LA +L G LYILDEPT GLH AD +LL L LR+QGNT++V+ Sbjct: 379 TLSGGELQRARLASQLGG-GLSGVLYILDEPTAGLHPADTDRLLRALRTLRNQGNTVLVV 437 Query: 889 EHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLK 937 EH+ ++ AD +VD+GP G+ GG IL G+ + S T +L Sbjct: 438 EHDEQILTAADHLVDMGPGSGTNGGRILAQGSLAEILGNSGSPTGEWLS 486 Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 36/113 (31%), Positives = 53/113 (46%), Gaps = 10/113 (8%) Query: 3 KIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYAR 62 ++ + GA HNL N+ L IP L ++G SGSGKS+L D L R+ + R Sbjct: 503 RLVLTGADKHNLNNVTLNIPVGTLTCISGPSGSGKSTLVRDCLIP-AVRQDLSGKKGIPR 561 Query: 63 QFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARV 115 + V E + + I+Q PRST T T + LR L+A++ Sbjct: 562 R---------VQGTEHFNRLVVIDQSPIGKTPRSTPATATGLLQVLRPLYAQL 605 Score = 42.4 bits (98), Expect = 0.078, Method: Compositional matrix adjust. Identities = 26/72 (36%), Positives = 39/72 (54%), Gaps = 5/72 (6%) Query: 613 LKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAEPAP 672 + + GAR +NL+++ L LP G SGSGKS+L DTLF ++R+ A Sbjct: 5 ISIRGARQHNLRNLNLDLPSNKLIVFCGPSGSGKSSLAFDTLFSESRRRFLDCLSA---- 60 Query: 673 YRDIQGLEHFDK 684 R QG++ +K Sbjct: 61 -RSRQGMDQPEK 71 >UniRef50_A6BZF4 Excinuclease ABC subunit A n=1 Tax=Planctomyces maris DSM 8797 RepID=A6BZF4_9PLAN Length = 847 Score = 483 bits (1243), Expect = e-134, Method: Compositional matrix adjust. Identities = 238/548 (43%), Positives = 354/548 (64%), Gaps = 13/548 (2%) Query: 402 SNRPCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLK------LAGQRAKI 455 S + C C+G R+ + R + + + + + + + + K ++ Q I Sbjct: 298 SGQICPDCQGARISQYGRSILLNQQSIDQVVQFTAPEIINWLDQWKAGEAQGMSLQDQVI 357 Query: 456 AEKILKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEP 515 A++I I RL++L +GL Y+ LSR ++TLSGGE QR RL + +GAG G Y+LDEP Sbjct: 358 ADQIEPSIRKRLEYLTEIGLGYIQLSRPSKTLSGGELQRARLTACLGAGTTGACYILDEP 417 Query: 516 SIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEG 575 + GLH + ++LL L L+ GNT+IVVEHD D I+AAD+++DIGP AG GG++V G Sbjct: 418 TAGLHANETQKLLRILQRLKQAGNTIIVVEHDHDVIKAADYLVDIGPQAGAEGGKLVFSG 477 Query: 576 PLEAIMAVPESLTGQYMSGKRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLF 635 +A + PES+T Q ++ + + R + E+ ++LTGAR NNLK++++ +P+ Sbjct: 478 DYDAFIQHPESMTAQGLTARFQNSPQAHRSKTSHEQFVQLTGARTNNLKEISVKVPLQQL 537 Query: 636 TCITGVSGSGKSTLINDTLFPIAQRQLNGATIAEPAP---YRDIQGLEHFDKVIDIDQSP 692 C+TGVSGSGKS+LI +TL P + +LN P P Y +QG+E+ ++ IDQS Sbjct: 538 VCVTGVSGSGKSSLIMETLVPAIKSELN----RRPNPALQYDSLQGVEYLQQIKIIDQSA 593 Query: 693 IGRTPRSNPATYTGVFTPVRELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVE 752 +G+ RSNPATY G++ VR+LF+ +R RGYT RFSFN GRC AC+G GV +++ Sbjct: 594 LGKNGRSNPATYCGIWDEVRKLFSKTKTARLRGYTARRFSFNSAEGRCGACRGTGVKRID 653 Query: 753 MHFLPDIYVPCDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQT 812 + FLP +++PC++C KR+NR TL + Y+GKT+ +VL+M+I EA EFF+++P + R LQ Sbjct: 654 LKFLPPVFLPCEKCHSKRFNRGTLSVTYRGKTVSDVLEMSIAEAGEFFESIPRIKRILQV 713 Query: 813 LMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLL 872 L+D+GL Y+ LGQ A LSGGEAQR++LA EL G TL++LDEPT GLH DI+ LL Sbjct: 714 LLDLGLGYLALGQPANLLSGGEAQRLRLASELFAPLNGMTLFVLDEPTRGLHSHDIECLL 773 Query: 873 DVLHKLRDQGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHT 932 L++L D GN+++VIEH+ V+ A+W++DLGPE G+ GG ++ G P +A T Sbjct: 774 QTLNRLIDAGNSVLVIEHHPQVMCAAEWLIDLGPEAGNAGGYLIDEGPPALIAANRRGAT 833 Query: 933 ARFLKPML 940 R L ++ Sbjct: 834 GRMLYELI 841 Score = 256 bits (655), Expect = 2e-66, Method: Compositional matrix adjust. Identities = 126/282 (44%), Positives = 183/282 (64%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 63 I +RGAR HNLKNI++ +P +++ +VTG+SGSGKSSL FDTL+ EGQRR++E+LS+ RQ Sbjct: 9 IRIRGARCHNLKNIDVDLPHNQISIVTGVSGSGKSSLVFDTLHQEGQRRFLENLSSGTRQ 68 Query: 64 FLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCPDH 123 S + VD I GL P I +Q + RST+ T+TE++D RLL+A++G C + Sbjct: 69 LFSQAQPVAVDQILGLPPTICFDQTQRVQSKRSTLATLTELYDLFRLLYAKLGIVHCVNC 128 Query: 124 DVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARIDGEV 183 L QT Q+VD VL+ + K++M+LAP++ RKG H+ L +A +G++RARIDG V Sbjct: 129 GRALHQQTPEQIVDLVLALEDRKKVMILAPVVSARKGNHSALLNQVAREGFVRARIDGAV 188 Query: 184 CDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVADMDDPKAE 243 D++ P +L H IE+V+DR V++ + RL ES + AL+ GGT +++ + Sbjct: 189 IDITQPHELPEDVPHDIEIVIDRIIVKEGIQSRLKESVDLALKQGGGTCLISHQIESGWS 248 Query: 244 ELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGV 285 + S AC C S + EP FSFN+P GACPTC+GLG+ Sbjct: 249 DRYVSTRLACGECNLSFPDPEPVTFSFNSPHGACPTCEGLGI 290 Score = 140 bits (354), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 83/229 (36%), Positives = 124/229 (54%), Gaps = 24/229 (10%) Query: 728 PGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKYKGKTIHE 787 P FSFN G C C+G G+I+ I C C+G R ++ I ++I + Sbjct: 270 PVTFSFNSPHGACPTCEGLGIIEPSESESGQI---CPDCQGARISQYGRSILLNQQSIDQ 326 Query: 788 VLDMTIEEAREFFDAV--------------------PALARKLQTLMDVGLTYIRLGQSA 827 V+ T E + D P++ ++L+ L ++GL YI+L + + Sbjct: 327 VVQFTAPEIINWLDQWKAGEAQGMSLQDQVIADQIEPSIRKRLEYLTEIGLGYIQLSRPS 386 Query: 828 TTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVV 887 TLSGGE QR +L L GT YILDEPT GLH + Q+LL +L +L+ GNTI+V Sbjct: 387 KTLSGGELQRARLTACLGA-GTTGACYILDEPTAGLHANETQKLLRILQRLKQAGNTIIV 445 Query: 888 IEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFL 936 +EH+ DVIK AD++VD+GP+ G+ GG+++ SG + + S TA+ L Sbjct: 446 VEHDHDVIKAADYLVDIGPQAGAEGGKLVFSGDYDAFIQHPESMTAQGL 494 Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 40/120 (33%), Positives = 64/120 (53%), Gaps = 15/120 (12%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLY----AEGQRRYVESLSA 59 +++ GART+NLK I++ +P +L+ VTG+SGSGKSSL +TL +E RR +L Sbjct: 515 VQLTGARTNNLKEISVKVPLQQLVCVTGVSGSGKSSLIMETLVPAIKSELNRRPNPALQY 574 Query: 60 YARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPR 119 + Q + +++ + I+Q + N RS T I D +R LF++ R Sbjct: 575 DSLQGVEYLQQIKI-----------IDQSALGKNGRSNPATYCGIWDEVRKLFSKTKTAR 623 Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 41/115 (35%), Positives = 63/115 (54%), Gaps = 12/115 (10%) Query: 611 KVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQ----LNGAT 666 +++++ GAR +NLK++ + LP + +TGVSGSGKS+L+ DTL QR+ L+ T Sbjct: 7 QMIRIRGARCHNLKNIDVDLPHNQISIVTGVSGSGKSSLVFDTLHQEGQRRFLENLSSGT 66 Query: 667 -----IAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFA 716 A+P I GL I DQ+ ++ RS AT T ++ R L+A Sbjct: 67 RQLFSQAQPVAVDQILGLP---PTICFDQTQRVQSKRSTLATLTELYDLFRLLYA 118 >UniRef50_D2ATA6 Excinuclease ABC, A subunit n=4 Tax=Actinomycetales RepID=D2ATA6_STRRD Length = 824 Score = 483 bits (1242), Expect = e-134, Method: Compositional matrix adjust. Identities = 275/690 (39%), Positives = 387/690 (56%), Gaps = 13/690 (1%) Query: 260 MRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPELSLAGGAIRGWDRRNFYYFQ 319 +R L F + G C C G GV+ DR++ P+L L GA +DR N F Sbjct: 137 LRGLTSAYFDRYSMEGRCKACGGRGVEVRPAEDRIVTRPDLPLLAGAGTWFDRANSGEFW 196 Query: 320 MLKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKENIEFKYMNDR----GDTSIRRH-PF 374 L +LA+ Y D+ PW L + VL+G+G I +K + D ++ R P Sbjct: 197 ALPALAERYGADLALPWRELPEEFRRAVLHGTGDGPITYKITTKQRKAGADVTVERSVPL 256 Query: 375 EGVLHNMERRYKETESSAVREELAKFISNRPCASCEGTRLRREARHVYVENTPLPAISDM 434 G + + R + + A RE A+F+ C C GT V + P + + Sbjct: 257 RGAVSEVSRLHDAAGTDAAREHYARFMRRTGCPRCGGTGFGEVGLTVRLAGLAYPEVIRL 316 Query: 435 SIGHAMEFFNNLK--LAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEA 492 + + + ++ L + K+A IL + R++ +V +GL +L ++RSA ++SGGE Sbjct: 317 PVEDLRGWVDTIEPTLTPTQRKVAGDILPGLARRVRLMVELGLGHLQITRSAPSMSGGEL 376 Query: 493 QRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIR 552 QR R+ +Q+ L G+++VLDEP GLH D L L LRD GNTV++VEHD + I Sbjct: 377 QRARITAQLNTDLTGIVFVLDEPGAGLHPADKHPLREILHDLRDAGNTVLLVEHDPELIA 436 Query: 553 AADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEVPKKRVPANPEKV 612 AD V+D+GPGAG GG +VA P + S+TG Y+ G+ +R Sbjct: 437 LADWVVDLGPGAGREGGRLVASAPPWELSRDGRSITGAYLGGRGPRVRRTRRSDPATTPR 496 Query: 613 LKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAEPAP 672 L L G + +N++ + +P+ TCITGVSGSGKS+L+++ L L G P Sbjct: 497 LGLIGVQAHNVRLDRVDIPLHALTCITGVSGSGKSSLLHEALGASLDAVLRGE---RPRA 553 Query: 673 YRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESRARGYTPGRFS 732 I+G D V +DQ+PIGRTPRS+PATYT F +R L+A P +R+RG G FS Sbjct: 554 VARIEGAGLLDWVTVVDQNPIGRTPRSSPATYTKAFDTIRRLYASTPAARSRGLGAGAFS 613 Query: 733 FNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKYKGKTIHEVLDMT 792 FN RGGRCEAC G G +V+MHF+PD++V CD C+G+R+ E L + Y+GK + EVLDMT Sbjct: 614 FNSRGGRCEACAGYGRRQVDMHFMPDMWVGCDVCEGRRFTPELLAVTYRGKAVDEVLDMT 673 Query: 793 IEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLAREL--SKRGTG 850 ++EA EFF LA L+ GL Y+RLGQSAT LSGGEAQR+KLA + G Sbjct: 674 VDEAAEFFGERADLAATLRAAQQAGLGYLRLGQSATELSGGEAQRLKLANAIMLGGGSRG 733 Query: 851 QTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADWIVDLGPEGGS 910 + L ILDEP TGLH +D+Q+++D L GN++V+ EH+L V ADWIVD+GP G Sbjct: 734 RGLVILDEPVTGLHPSDVQRVVDAFDTLLACGNSVVIAEHDLHVAACADWIVDMGPGAGD 793 Query: 911 GGGEILVSGTPETVAECEASHTARFLKPML 940 GG I+ G P T+A TA +L+P+L Sbjct: 794 RGGRIVNEGPPATIAAGPGV-TAGYLRPLL 822 Score = 127 bits (318), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 55/114 (48%), Positives = 85/114 (74%) Query: 2 DKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYA 61 D I V GARTHNL+N+++ P+++++ TG+SGSGK+SLA DT++AE Q RY+ +S + Sbjct: 11 DVITVVGARTHNLRNVSVTFPKNRIVAFTGVSGSGKTSLAIDTVHAEAQLRYLNGVSPFF 70 Query: 62 RQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARV 115 RQF+S +P VD I GL ++++Q+ + NPRST+G++T + D+L LLFAR+ Sbjct: 71 RQFISPRNRPQVDRISGLGATLAVDQRRLNRNPRSTLGSVTGVDDFLGLLFARM 124 Score = 73.6 bits (179), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 54/151 (35%), Positives = 75/151 (49%), Gaps = 14/151 (9%) Query: 612 VLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQ-RQLNGAT---- 666 V+ + GAR +NL++V++T P TGVSGSGK++L DT+ AQ R LNG + Sbjct: 12 VITVVGARTHNLRNVSVTFPKNRIVAFTGVSGSGKTSLAIDTVHAEAQLRYLNGVSPFFR 71 Query: 667 -IAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGV----PES 721 P + + + +DQ + R PRS + TGV + LFA + PE+ Sbjct: 72 QFISPRNRPQVDRISGLGATLAVDQRRLNRNPRSTLGSVTGVDDFLGLLFARMPALGPEA 131 Query: 722 RA----RGYTPGRFSFNVRGGRCEACQGDGV 748 R RG T F GRC+AC G GV Sbjct: 132 REFPELRGLTSAYFDRYSMEGRCKACGGRGV 162 Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust. Identities = 39/110 (35%), Positives = 53/110 (48%), Gaps = 17/110 (15%) Query: 8 GARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQFLSL 67 G + HN++ + IP L +TG+SGSGKSSL + L A SL A R Sbjct: 501 GVQAHNVRLDRVDIPLHALTCITGVSGSGKSSLLHEALGA--------SLDAVLRG---- 548 Query: 68 MEKP-DVDHIEG---LSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFA 113 E+P V IEG L ++Q PRS+ T T+ D +R L+A Sbjct: 549 -ERPRAVARIEGAGLLDWVTVVDQNPIGRTPRSSPATYTKAFDTIRRLYA 597 >UniRef50_B1KRA3 ABC transporter related n=1 Tax=Shewanella woodyi ATCC 51908 RepID=B1KRA3_SHEWM Length = 818 Score = 471 bits (1211), Expect = e-131, Method: Compositional matrix adjust. Identities = 273/701 (38%), Positives = 397/701 (56%), Gaps = 28/701 (3%) Query: 247 FSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPELSLAGGA 306 ++ C CG L + FS N G C C+GLG F D +I + SL Sbjct: 128 LNSELFCDDCGLYGETLSAKQFSPNRKEGKCLQCNGLGKLASFSVDLIIPDKTKSLN--- 184 Query: 307 IRGWDRRNFYYFQM------LKSLADHYKFDVEAPWGSLSANVHKVVLYGSGK-ENIEF- 358 WD F + +++ D++ P+ SLS + LYG+ K I+ Sbjct: 185 -WIWDNAEPNTFSLPNLRKAFEAMCADEGIDIDCPYSSLSDEAKQRALYGTDKGYTIKVG 243 Query: 359 KYMNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGTRLRREA 418 K ND F G++ E YK+T S ++ ++I + C C+G RLR E+ Sbjct: 244 KVTNDI--------VFTGIIGYQEYSYKKTTSVTRQKAFERYIGEQHCPGCDGARLRPES 295 Query: 419 RHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNVGLNYL 478 V V M+IG + +++ G ++ I ++ +VNVGL YL Sbjct: 296 LAVKVVGKNFNDCQCMAIGDMTYWLSSMIQDGTLPVGVHELANAIINQGHNIVNVGLGYL 355 Query: 479 TLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLG 538 L+R + +LSGGE QRI LA + + L GVMYVLDEP+IGLH+ D +LL ++ LRDLG Sbjct: 356 CLNRESASLSGGELQRILLAQHVASDLSGVMYVLDEPTIGLHEEDTLKLLDSMRQLRDLG 415 Query: 539 NTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKI 598 N+++V+EHDE IRAAD +I+IGPGAG GGEV+ +G E ++ S T ++ + K+ Sbjct: 416 NSLVVIEHDETIIRAADWIIEIGPGAGSKGGEVIFQGSYEELIDCQASATAKFFRSRDKL 475 Query: 599 EVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIA 658 +P E + NNLK T++ PV TC+TGVSGSGKS+L++ +++ A Sbjct: 476 ---SSHIPPMKE-WFTINDLHRNNLKIDTVSFPVNALTCVTGVSGSGKSSLVS-SIYDEA 530 Query: 659 QRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGV 718 QR L GA ++QG+E F+ +I ++Q PIGR+ RS ATY G+ +R++FA Sbjct: 531 QR-LIGARAKRKELQSNLQGVEVFNDIIYVEQKPIGRSSRSTIATYLGISDDIRDMFAES 589 Query: 719 PESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEI 778 ++ A GY FS NV GGRCEAC+G G I+++M + V C++C GK++ + L+I Sbjct: 590 NDAIAAGYERKHFSSNVAGGRCEACKGQGYIELDMSIFKNEEVLCEECDGKKFQPQILDI 649 Query: 779 KYKGKTIHEVLDMTIEEAREFF--DAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQ 836 K K I++VL+MT++E F DA P++ R L L + GL Y+ LG + TTLSGGEAQ Sbjct: 650 KVHNKNIYDVLNMTVDELVLHFSVDAYPSIHRALSCLAEFGLGYLVLGSATTTLSGGEAQ 709 Query: 837 RVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIK 896 R+ LA +L K +L+I DEPT GLHF+DI+ LL + +L G+T+++IEHNLDVI Sbjct: 710 RLNLATKLLKTKLQSSLFIFDEPTRGLHFSDIRYLLALFDRLLSDGHTVLLIEHNLDVIC 769 Query: 897 TADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLK 937 + WIVD+GPEGG GGEI+ G +T+ S TA +K Sbjct: 770 QSHWIVDVGPEGGDKGGEIVFEGGIDTMLCSSDSLTAIHVK 810 Score = 102 bits (255), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 52/119 (43%), Positives = 78/119 (65%), Gaps = 3/119 (2%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 63 I ++G THNLK+I++ IP++K++VVTG+SGSGKSSL DTL+ + Y+ +LS ++ Sbjct: 6 ITMQGVNTHNLKDIDISIPKNKMVVVTGVSGSGKSSLIIDTLFEYSKSLYIGALS--SKS 63 Query: 64 FLSLMEKPDVDHIEGLSPAISIEQKSTS-HNPRSTVGTITEIHDYLRLLFARVGEPRCP 121 F V+ + G P ++++Q NPRST+GT+T I +RLLFA G+P CP Sbjct: 64 FDMGEGSYQVERVSGTQPPVALKQSVKRLANPRSTIGTVTGIDGLIRLLFAHAGKPSCP 122 Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 51/178 (28%), Positives = 78/178 (43%), Gaps = 34/178 (19%) Query: 613 LKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAEPAP 672 + + G +NLKD+ +++P +TGVSGSGKS+LI DTLF ++ GA ++ Sbjct: 6 ITMQGVNTHNLKDIDISIPKNKMVVVTGVSGSGKSSLIIDTLFEYSKSLYIGALSSK--S 63 Query: 673 YRDIQGLEHFDKVIDIDQSPIG--------RTPRSNPATYTGVFTPVRELF--AGVPESR 722 + +G ++V Q P+ PRS T TG+ +R LF AG P Sbjct: 64 FDMGEGSYQVERVSGT-QPPVALKQSVKRLANPRSTIGTVTGIDGLIRLLFAHAGKPSCP 122 Query: 723 A------------------RGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVP 762 A + +FS N + G+C C G G + F D+ +P Sbjct: 123 ACFQELNSELFCDDCGLYGETLSAKQFSPNRKEGKCLQCNGLGKLA---SFSVDLIIP 177 Score = 49.3 bits (116), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 36/102 (35%), Positives = 55/102 (53%), Gaps = 8/102 (7%) Query: 12 HNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQFLSLMEKP 71 +NLK + P + L VTG+SGSGKSSL ++Y E QR + A A++ + Sbjct: 494 NNLKIDTVSFPVNALTCVTGVSGSGKSSLV-SSIYDEAQRL----IGARAKR---KELQS 545 Query: 72 DVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFA 113 ++ +E + I +EQK + RST+ T I D +R +FA Sbjct: 546 NLQGVEVFNDIIYVEQKPIGRSSRSTIATYLGISDDIRDMFA 587 >UniRef50_A1TP16 Excinuclease ABC, A subunit n=4 Tax=Bacteria RepID=A1TP16_ACIAC Length = 944 Score = 462 bits (1188), Expect = e-128, Method: Compositional matrix adjust. Identities = 292/772 (37%), Positives = 402/772 (52%), Gaps = 115/772 (14%) Query: 268 FSFNNPAGACPTCDGLGVQQYFDPDRVIQNPELSLAGGAIRGWDRRNFYYFQMLKSLADH 327 FS N P GACP C G+G ++ + L++ A+ W + Q L+ + Sbjct: 175 FSPNTPEGACPHCHGMGRVYEVTERSLVPDDRLTIRERAVAAWP--TAWGGQNLRDILVM 232 Query: 328 YKFDVEAPWGSLSANVHKVVLYGSGKENIEF-------------------KYMNDRGDTS 368 DV+ PW L +L+ + + YM +S Sbjct: 233 LGHDVDVPWRDLPRKTRDWILFTDEQPVVPVYAGLDRKAAQAARKAGTPPSYMGTF--SS 290 Query: 369 IRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGTRLRREARHVYVENTPL 428 RRH VLH+ + ++S+ +RE A F+ PC +C G RL+ EA V + Sbjct: 291 ARRH----VLHS----FAHSQSARMRERAAAFLVGSPCPACGGKRLKPEALSVTFAGHDI 342 Query: 429 PAISDMSIGHAMEFF---------NNLKLAG-------------QRAKIA---------- 456 + + +G ++L+ +G RA IA Sbjct: 343 AELGRLPLGELARLLQPVAEGRLGDSLRPSGGPRAPVARPGADSHRAHIARRVAAGGSAH 402 Query: 457 --------------EKIL------KEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIR 496 EK+L +EIG R+ L +GL+YLTL RS +LS GE QR+R Sbjct: 403 AAAPDVRRTPDLSEEKVLAAQRLAQEIGARIAALSQLGLHYLTLDRSTPSLSSGELQRLR 462 Query: 497 LASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADH 556 LA+Q+G+ L GV+YVLDEPS GLH D E L L L+ GN++ VVEHD +RAAD Sbjct: 463 LATQLGSQLFGVVYVLDEPSAGLHPADGEALRAALHRLKRAGNSLFVVEHDLATMRAADW 522 Query: 557 VIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEVPKKRVPANPEKVLKLT 616 ++D+GPGAG+HGGEV+ GP + + AV S T +Y+ R P +R P L+L Sbjct: 523 LVDVGPGAGMHGGEVLYSGPPDGLAAVQPSRTRRYLFPGRDGPAPVQRTPREAAGWLRLE 582 Query: 617 GARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLF---------PIAQRQLNGATI 667 G +NLK V PVG T +TGVSGSGKS+L++ L P+A + + ++ Sbjct: 583 GIGRHNLKGVDAAFPVGCLTAVTGVSGSGKSSLVSRALVELVAQALGSPLADAREDEESV 642 Query: 668 AEPAP-----------------------YRDIQGLEHFDKVIDIDQSPIGRTPRSNPATY 704 + +P I L +++ +DQ PIGRTPRSN ATY Sbjct: 643 PDGSPGGPPHAAPQDDDPGAADDPGGATSGRIAELAGIRRLVRVDQKPIGRTPRSNLATY 702 Query: 705 TGVFTPVRELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCD 764 TG+F VR+LFA P +R R Y PGRFSFNV GRC C+G+G + VE+ FLP +Y PC Sbjct: 703 TGLFDGVRKLFAATPAARRRRYGPGRFSFNVAAGRCPTCEGEGSVSVELLFLPSVYAPCP 762 Query: 765 QCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLG 824 C G RYN TLE+++ G I +VL +T++ A E F A+ R L L ++GL Y+RLG Sbjct: 763 DCHGARYNPATLEVRWNGLDIADVLRLTVDAACEAFAREAAVLRPLALLREIGLGYLRLG 822 Query: 825 QSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNT 884 Q AT LSGGEAQR+KLA EL + G TLY+LDEPTTGLH AD+ +LL L L GNT Sbjct: 823 QPATELSGGEAQRIKLATELQRPQRGDTLYVLDEPTTGLHPADVDRLLVQLDGLAAAGNT 882 Query: 885 IVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFL 936 +VV+EH++ V+ DW++D+GP G GG I+ +GTP VA S TA +L Sbjct: 883 VVVVEHDMRVVAACDWVIDMGPGAGGDGGRIVAAGTPSEVARQAGSRTAPYL 934 Score = 135 bits (340), Expect = 7e-30, Method: Compositional matrix adjust. Identities = 62/114 (54%), Positives = 87/114 (76%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 63 + VRGAR HNL+N+++ IPRD L+V TG+SGSGKSSLAF TLYAE QRRY+ES++ YAR+ Sbjct: 49 VRVRGAREHNLRNVDVDIPRDALVVFTGVSGSGKSSLAFGTLYAEAQRRYLESVAPYARR 108 Query: 64 FLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGE 117 + P+VD I+GL PA++++Q+ + RS+VG+ T I LRLL++R G+ Sbjct: 109 LIDQAGTPEVDAIDGLPPAVALQQQRGTPTARSSVGSATTISSLLRLLYSRAGQ 162 Score = 118 bits (295), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 57/130 (43%), Positives = 86/130 (66%), Gaps = 1/130 (0%) Query: 809 KLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADI 868 ++ L +GL Y+ L +S +LS GE QR++LA +L + G +Y+LDEP+ GLH AD Sbjct: 432 RIAALSQLGLHYLTLDRSTPSLSSGELQRLRLATQLGSQLFG-VVYVLDEPSAGLHPADG 490 Query: 869 QQLLDVLHKLRDQGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECE 928 + L LH+L+ GN++ V+EH+L ++ ADW+VD+GP G GGE+L SG P+ +A + Sbjct: 491 EALRAALHRLKRAGNSLFVVEHDLATMRAADWLVDVGPGAGMHGGEVLYSGPPDGLAAVQ 550 Query: 929 ASHTARFLKP 938 S T R+L P Sbjct: 551 PSRTRRYLFP 560 Score = 92.0 bits (227), Expect = 9e-17, Method: Compositional matrix adjust. Identities = 72/190 (37%), Positives = 95/190 (50%), Gaps = 15/190 (7%) Query: 405 PCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIG 464 PC C G R V + + +++ A E F +L+ Sbjct: 760 PCPDCHGARYNPATLEVRWNGLDIADVLRLTVDAACEAFAR----------EAAVLRP-- 807 Query: 465 DRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVG-VMYVLDEPSIGLHQRD 523 L L +GL YL L + A LSGGEAQRI+LA+++ G +YVLDEP+ GLH D Sbjct: 808 --LALLREIGLGYLRLGQPATELSGGEAQRIKLATELQRPQRGDTLYVLDEPTTGLHPAD 865 Query: 524 NERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAV 583 +RLL L L GNTV+VVEHD + A D VID+GPGAG GG +VA G + Sbjct: 866 VDRLLVQLDGLAAAGNTVVVVEHDMRVVAACDWVIDMGPGAGGDGGRIVAAGTPSEVARQ 925 Query: 584 PESLTGQYMS 593 S T Y++ Sbjct: 926 AGSRTAPYLA 935 Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 55/198 (27%), Positives = 87/198 (43%), Gaps = 33/198 (16%) Query: 613 LKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAEPAP 672 +++ GAR +NL++V + +P TGVSGSGKS+L TL+ AQR+ + AP Sbjct: 49 VRVRGAREHNLRNVDVDIPRDALVVFTGVSGSGKSSLAFGTLYAEAQRRY----LESVAP 104 Query: 673 YR----------DIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESR 722 Y ++ ++ + + Q T RS+ + T + + +R L+ SR Sbjct: 105 YARRLIDQAGTPEVDAIDGLPPAVALQQQRGTPTARSSVGSATTISSLLRLLY-----SR 159 Query: 723 ARGYTPGR--------FSFNVRGGRCEACQGDG-VIKVEMHFLPDIYVPCDQCKGKRYNR 773 A G P R FS N G C C G G V +V L VP D+ + Sbjct: 160 A-GQYPARQPMLYAEDFSPNTPEGACPHCHGMGRVYEVTERSL----VPDDRLTIRERAV 214 Query: 774 ETLEIKYKGKTIHEVLDM 791 + G+ + ++L M Sbjct: 215 AAWPTAWGGQNLRDILVM 232 >UniRef50_D1JG21 Putative uncharacterized protein n=1 Tax=uncultured archaeon RepID=D1JG21_9ARCH Length = 799 Score = 462 bits (1188), Expect = e-128, Method: Compositional matrix adjust. Identities = 269/688 (39%), Positives = 405/688 (58%), Gaps = 22/688 (3%) Query: 263 LEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPELSL-----AGGAIRGWDRRNFYY 317 LE + F+FN+P G CP C G G Q F +++ P +L G A G +NF Sbjct: 119 LEFKHFTFNDPNGWCPNCKGQGYIQEFHEKKLVPEPTKNLLQICEEGSAAFG-SMKNF-- 175 Query: 318 FQMLKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKENIEFKYMNDRGDTSIRRHPFEGV 377 K LA+ FDV P+ L + + LYGS E ++ K+ ++R + + FEG+ Sbjct: 176 ---TKGLAESMNFDVNTPYNKLPQKIRDIFLYGS-DEKMKIKWRSERFE-GVFDTKFEGI 230 Query: 378 LHNMERRYKETESSAVREELAK-FISNRPCASCEGTRLRREARHVYVENTPLPAISDMSI 436 + + R +T S+ ++ K F++ C SC G R++ + + + + +++M + Sbjct: 231 IPYLWRVLAKTTSAYRINKIEKNFMTKVTCPSCYGYRIKEQVTNATINGKHIGELANMPM 290 Query: 437 GHAMEFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIR 496 +EF L + + I EI RL+ G++YL+L+RS TLSGGE QR+ Sbjct: 291 DELIEFLKRLADTHVKTVQGKAIKDEIIKRLEKSRLAGISYLSLNRSMTTLSGGEVQRLN 350 Query: 497 LASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADH 556 L + GL ++++LDEPS G+H+ + L+ L + +LGN+VI+VEHD I +D Sbjct: 351 LMIHLNTGLNSLVFILDEPSTGMHEIEKNNLMTLLKEINNLGNSVIIVEHDRSIISKSDQ 410 Query: 557 VIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEVP---KKRVPANPEKVL 613 +ID+GPG G GGE+V +G ++ I +S+TG+++SG+ KI ++R K L Sbjct: 411 IIDLGPGPGRLGGEIVFQGTVDEIKKDKKSITGKFLSGELKISKKNSGQRRRITKSAKFL 470 Query: 614 KLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAEPAPY 673 + NNLK++ + +P+GL I GVSGSGKS+LI+DTL P+ + + E Sbjct: 471 VMKNVTTNNLKNLEVKIPLGLMVGIAGVSGSGKSSLISDTLVPLLKEHFSKRDNEEEFIQ 530 Query: 674 RD-----IQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESRARGYTP 728 D + G E+ I I QSPIGR S P +Y G++ +R+LFA ++ R Y+ Sbjct: 531 IDEIKGKLSGWENISDCIVITQSPIGRVKTSTPVSYIGIWDNIRKLFAKQELAKQRKYSS 590 Query: 729 GRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKYKGKTIHEV 788 G FSFN G C C+G G I +++ I +PC++C G RY E L+++YKGK HE+ Sbjct: 591 GHFSFNSDKGGCPNCKGAGSIDLQISPFTKIDIPCEECNGTRYTPEILDVEYKGKNTHEI 650 Query: 789 LDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRG 848 L++T+ E+ + F P + + L+ L ++G+ YI LGQ ATTLSGGEAQR+KLA+EL K Sbjct: 651 LNLTVSESLDIFKDEPTILKHLKILDEIGMGYITLGQPATTLSGGEAQRIKLAKELGKSR 710 Query: 849 TGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADWIVDLGPEG 908 +TLY+LDEPT GLH DIQ++L++L KL DQGNT+++IEHN+D++ AD++V+LGPEG Sbjct: 711 RSKTLYVLDEPTFGLHDNDIQKMLNILDKLVDQGNTVLIIEHNIDILSYADYLVELGPEG 770 Query: 909 GSGGGEILVSGTPETVAECEASHTARFL 936 G GGEI+ GTPE V E S TA FL Sbjct: 771 GPKGGEIIAMGTPEEVKMNEQSKTAPFL 798 Score = 113 bits (283), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 59/114 (51%), Positives = 82/114 (71%), Gaps = 5/114 (4%) Query: 1 MDKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAY 60 M+ IEV GAR HNLKNI + IP++K++ +TG+SGSGKSSLAFD L+ EG+RRY++S+ Sbjct: 1 MNNIEVVGARIHNLKNITVKIPKNKIVTITGVSGSGKSSLAFDLLFEEGRRRYLQSI--- 57 Query: 61 ARQFLSLMEKPDVDHIEGLSPAISIEQKSTSH-NPRSTVGTITEIHDYLRLLFA 113 + EKP D + GLSP +++EQ++ + NPRSTVGT T I+ LR L+ Sbjct: 58 GFPYYIEKEKP-FDLLNGLSPTVAVEQRTALYVNPRSTVGTKTMIYSLLRQLYT 110 Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 69/190 (36%), Positives = 106/190 (55%), Gaps = 15/190 (7%) Query: 405 PCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIG 464 PC C GTR E V + I ++++ +++ F K ILK Sbjct: 624 PCEECNGTRYTPEILDVEYKGKNTHEILNLTVSESLDIF----------KDEPTILK--- 670 Query: 465 DRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVG-VMYVLDEPSIGLHQRD 523 LK L +G+ Y+TL + A TLSGGEAQRI+LA ++G +YVLDEP+ GLH D Sbjct: 671 -HLKILDEIGMGYITLGQPATTLSGGEAQRIKLAKELGKSRRSKTLYVLDEPTFGLHDND 729 Query: 524 NERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAV 583 +++L L L D GNTV+++EH+ D + AD+++++GP G GGE++A G E + Sbjct: 730 IQKMLNILDKLVDQGNTVLIIEHNIDILSYADYLVELGPEGGPKGGEIIAMGTPEEVKMN 789 Query: 584 PESLTGQYMS 593 +S T +++ Sbjct: 790 EQSKTAPFLA 799 Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 47/148 (31%), Positives = 79/148 (53%), Gaps = 11/148 (7%) Query: 613 LKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGAT-----I 667 +++ GAR +NLK++T+ +P ITGVSGSGKS+L D LF +R+ + I Sbjct: 4 IEVVGARIHNLKNITVKIPKNKIVTITGVSGSGKSSLAFDLLFEEGRRRYLQSIGFPYYI 63 Query: 668 AEPAPYRDIQGLEHFDKVIDIDQ-SPIGRTPRSNPATYTGVFTPVRELFAGVPESRARGY 726 + P+ + GL + ++Q + + PRS T T +++ +R+L+ + ++A Sbjct: 64 EKEKPFDLLNGL---SPTVAVEQRTALYVNPRSTVGTKTMIYSLLRQLYT-LESTKAGSL 119 Query: 727 TPGRFSFNVRGGRCEACQGDGVIKVEMH 754 F+FN G C C+G G I+ E H Sbjct: 120 EFKHFTFNDPNGWCPNCKGQGYIQ-EFH 146 Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust. Identities = 36/110 (32%), Positives = 55/110 (50%), Gaps = 3/110 (2%) Query: 6 VRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQFL 65 ++ T+NLKN+ + IP ++ + G+SGSGKSSL DTL + + S +F+ Sbjct: 472 MKNVTTNNLKNLEVKIPLGLMVGIAGVSGSGKSSLISDTLVPLLKEHF--SKRDNEEEFI 529 Query: 66 SLME-KPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFAR 114 + E K + E +S I I Q ST + I D +R LFA+ Sbjct: 530 QIDEIKGKLSGWENISDCIVITQSPIGRVKTSTPVSYIGIWDNIRKLFAK 579 >UniRef50_C9YE98 Putative uncharacterized protein n=1 Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9YE98_9BURK Length = 1850 Score = 456 bits (1173), Expect = e-126, Method: Compositional matrix adjust. Identities = 329/960 (34%), Positives = 477/960 (49%), Gaps = 149/960 (15%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 63 I +RGAR HNLKN++L I +L VVTG SGSGKSSL FDTLYAEGQRRYVE+ SAYARQ Sbjct: 89 IRIRGARQHNLKNLDLDIRTGELTVVTGPSGSGKSSLVFDTLYAEGQRRYVETFSAYARQ 148 Query: 64 FLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCPDH 123 FL M+KP VD +EG+ PAI+I+Q + + RSTVGT+TE++D+L+LLF+R G D Sbjct: 149 FLDRMDKPAVDKVEGVPPAIAIDQTNPVRSSRSTVGTMTELNDHLKLLFSRAGSLFDKDT 208 Query: 124 DVPLAAQTVSQMVDNVLSQPEGK---RLMLLAPIIKERKGEHTKTLENLASQGYIRARID 180 +P+ T + +L + + RL+L P+ + + L++ G+ R + + Sbjct: 209 ALPVQHDTPETIYTTLLQRAAAEGNPRLVLTFPVELPGNATPDEVTQWLSASGFTRVQAE 268 Query: 181 GEVCDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGG-------TAV 233 EV ++ K+ ++VV DRF++ R+ E+ ET+L+ G Sbjct: 269 REVSTVNGVRKV-------LDVVADRFRIDGVEKARVLEAIETSLKRGSGRLNAYVLKES 321 Query: 234 VADMDDPKA----------EELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGL 283 +A +D +A E FS CP + +FSFN+ GAC C G Sbjct: 322 IAPVDSTRAAPEIIANAAPEIWRFSTGLHCPQSDIRYTDPIASMFSFNSAVGACDACRGF 381 Query: 284 GVQQYFDPDRVIQNPELSLAGGAIRGWDRRNFYYFQ-MLKSLADHYKFDVEAPWGSLSAN 342 G D VI N +L+L GA++ + Q L A+ + PW L+A Sbjct: 382 GRVVGVDYGLVIPNDKLTLRAGAVKPMQTPAWQECQDDLMRHAEASGIPRDTPWYKLTAE 441 Query: 343 VHKVVLYGSGKENIEFKYMNDRGDTSIRRHPFEGVLHNMERRYKETESSA----VREELA 398 VL GS N ++ +H F ++R ++ E+ A +R L+ Sbjct: 442 QKHWVLKGSPNWNGKWN-----------QHWF-----GVDRFFEYLETKAYKMHIRVLLS 485 Query: 399 KFISNRPCASCEGTRLRREA--------RHVYVENTP------------------LPAIS 432 K+ S C +C G+RL+ E+ Y+ P LP +S Sbjct: 486 KYRSYTTCPTCNGSRLKTESLLWRIGTKDQAYMALDPAKRFMPKGVKWSREQLEALPGLS 545 Query: 433 -----DMSIGHAMEFFNNLK-------------LAG---QRAKIAEKILKEIGDRLKFLV 471 M + FF+ L+ LAG R ++ D Sbjct: 546 LHDLMLMPLDRLKRFFDALQADLGIFGGAEPGVLAGASSTRFASSKSAPSSTPDSASRSE 605 Query: 472 NVGLNYLTLSRSAETLSGGEAQRIR------LASQIGAGL-----VGVMYV-LDEPSIGL 519 +V N ++ + S +T+S A L ++G L VG+ Y+ LD S L Sbjct: 606 DVAPNTVSAATSEKTVSAPTASEAEHKTLKLLFEEVGTRLKYLCDVGIGYLTLDRQSRTL 665 Query: 520 HQRDNERL-----LGTL--------------IHLRDLGNTVI-------------VVEHD 547 + +R+ LGT +H RD+ ++ VVEHD Sbjct: 666 SGGEVQRINLTTALGTSLVNTLFVLDEPSIGLHPRDMNRIIVAMQRLRDAGNTLVVVEHD 725 Query: 548 EDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEVPKKRV-- 605 + AAD +ID+GPG G GG++V +G EA+ +++TG Y+ G++++ + KR+ Sbjct: 726 PAVMLAADRMIDMGPGPGEKGGQIVFDGTTEALKGA-DTMTGAYLGGRKQVGMGFKRMVA 784 Query: 606 PANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGA 665 P NP +L+ G +NLK+V++ +P+ C+TGVSGSGKSTLI D L P R A Sbjct: 785 PNNPRLILE--GVTEHNLKNVSVEIPLQRLVCVTGVSGSGKSTLIQDVLAPALLRHFGKA 842 Query: 666 TIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESRARG 725 T P + + G E ++ +DQSPIG+T RSNP +Y G + +RELFAG SR R Sbjct: 843 T-ETPGAHTSLLGAEQLSDMVFVDQSPIGKTARSNPVSYVGAWDAIRELFAGAALSRERS 901 Query: 726 YTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKYKGKTI 785 YT +FSFN GRC C G G VEM FL D+Y+ C C GKRY E LE+ + K Sbjct: 902 YTAAKFSFNSGDGRCPTCGGSGFEHVEMQFLSDVYLRCPDCDGKRYRPEILEVTIERKGR 961 Query: 786 H----EVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLA 841 H +VL++T+ EA + F A + R LQ ++DVGL Y++LGQ TLSGGEAQR+KLA Sbjct: 962 HVNVADVLELTVSEAADLFSADREVIRVLQPIVDVGLEYVKLGQPVPTLSGGEAQRLKLA 1021 Score = 197 bits (500), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 100/196 (51%), Positives = 132/196 (67%), Gaps = 4/196 (2%) Query: 401 ISNRPCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAG----QRAKIA 456 + ++ C +C GTRL AR+V + I+ +S+ ++ L++AG + I+ Sbjct: 1463 LHDKACPTCSGTRLNATARNVKFAGVGITDIARLSVTDVRQWVQTLQVAGGMTTREGDIS 1522 Query: 457 EKILKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPS 516 ++ EI RL+FL VGL YLTL R A TLSGGEAQRIRLA+Q+G+ L GV YVLDEP+ Sbjct: 1523 RDLVPEIRSRLEFLEEVGLGYLTLDRGAPTLSGGEAQRIRLAAQLGSNLQGVCYVLDEPT 1582 Query: 517 IGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGP 576 IGLH RDN+ LLG L L D GNT++VVEHDED IR ADH+IDIGP AG GG +VA+G Sbjct: 1583 IGLHARDNKILLGALQSLSDKGNTLVVVEHDEDTIRHADHIIDIGPSAGKRGGRLVAQGS 1642 Query: 577 LEAIMAVPESLTGQYM 592 + + PES TG+Y+ Sbjct: 1643 IADVQNAPESQTGRYL 1658 Score = 136 bits (343), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 87/251 (34%), Positives = 124/251 (49%), Gaps = 43/251 (17%) Query: 728 PGRFSFNVRGGRCEACQGDGVI------KV-------------EMHF----LPDIY-VPC 763 P FS+N + G C C G GV KV E F + D++ C Sbjct: 1409 PRLFSYNSKHGWCPDCVGTGVALTKEQRKVFDDSVKDDDNKGREQTFAEADIEDLHDKAC 1468 Query: 764 DQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFF------------------DAVPA 805 C G R N +K+ G I ++ +++ + R++ D VP Sbjct: 1469 PTCSGTRLNATARNVKFAGVGITDIARLSVTDVRQWVQTLQVAGGMTTREGDISRDLVPE 1528 Query: 806 LARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHF 865 + +L+ L +VGL Y+ L + A TLSGGEAQR++LA +L G Y+LDEPT GLH Sbjct: 1529 IRSRLEFLEEVGLGYLTLDRGAPTLSGGEAQRIRLAAQLGSNLQG-VCYVLDEPTIGLHA 1587 Query: 866 ADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVA 925 D + LL L L D+GNT+VV+EH+ D I+ AD I+D+GP G GG ++ G+ V Sbjct: 1588 RDNKILLGALQSLSDKGNTLVVVEHDEDTIRHADHIIDIGPSAGKRGGRLVAQGSIADVQ 1647 Query: 926 ECEASHTARFL 936 S T R+L Sbjct: 1648 NAPESQTGRYL 1658 Score = 103 bits (256), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 56/141 (39%), Positives = 85/141 (60%), Gaps = 15/141 (10%) Query: 786 HEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELS 845 H+ L + EE + +L+ L DVG+ Y+ L + + TLSGGE QR+ L L Sbjct: 631 HKTLKLLFEE----------VGTRLKYLCDVGIGYLTLDRQSRTLSGGEVQRINLTTAL- 679 Query: 846 KRGTG--QTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADWIVD 903 GT TL++LDEP+ GLH D+ +++ + +LRD GNT+VV+EH+ V+ AD ++D Sbjct: 680 --GTSLVNTLFVLDEPSIGLHPRDMNRIIVAMQRLRDAGNTLVVVEHDPAVMLAADRMID 737 Query: 904 LGPEGGSGGGEILVSGTPETV 924 +GP G GG+I+ GT E + Sbjct: 738 MGPGPGEKGGQIVFDGTTEAL 758 Score = 85.5 bits (210), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 55/183 (30%), Positives = 86/183 (46%), Gaps = 21/183 (11%) Query: 120 CPDHDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARI 179 C + Q+ + +L G+ + LLAP+++ RKG +T+ + +G+ R+ Sbjct: 1251 CYKDGAAVEPQSADSIAAQLLKNYRGQHIGLLAPLVQGRKGVYTELADWARPKGFTHLRV 1310 Query: 180 DGEVCDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALE--LSGGTAVVADM 237 DG S P+++ K+H IE+ V D+T + TAL L+ G VV + Sbjct: 1311 DGNFLPTSGFPRIDRFKEHNIELPVASL----DVTPANESALRTALADALTHGKGVVYVL 1366 Query: 238 DDPKA---------------EELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDG 282 D + + +FS ACP+C S EL+PRLFS+N+ G CP C G Sbjct: 1367 SDIGSLREVMAAGESAAGVGKVQVFSTKRACPVCATSYAELDPRLFSYNSKHGWCPDCVG 1426 Query: 283 LGV 285 GV Sbjct: 1427 TGV 1429 Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 41/122 (33%), Positives = 62/122 (50%), Gaps = 6/122 (4%) Query: 601 PKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQR 660 P +R + +++ GAR +NLK++ L + G T +TG SGSGKS+L+ DTL+ QR Sbjct: 77 PPQRAFTMTQGTIRIRGARQHNLKNLDLDIRTGELTVVTGPSGSGKSSLVFDTLYAEGQR 136 Query: 661 QLNGATIAEPAPYRDIQGLEHFDKV------IDIDQSPIGRTPRSNPATYTGVFTPVREL 714 + A + D DKV I IDQ+ R+ RS T T + ++ L Sbjct: 137 RYVETFSAYARQFLDRMDKPAVDKVEGVPPAIAIDQTNPVRSSRSTVGTMTELNDHLKLL 196 Query: 715 FA 716 F+ Sbjct: 197 FS 198 Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 41/119 (34%), Positives = 56/119 (47%), Gaps = 23/119 (19%) Query: 3 KIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYAR 62 ++ + G HNLKN+++ IP +L+ VTG+SGSGKS+L D L A R Sbjct: 789 RLILEGVTEHNLKNVSVEIPLQRLVCVTGVSGSGKSTLIQDVL-----------APALLR 837 Query: 63 QFLSLMEKPDVDH----IEGLSPAISIEQ----KSTSHNPRSTVGTITEIHDYLRLLFA 113 F E P E LS + ++Q K+ NP S VG D +R LFA Sbjct: 838 HFGKATETPGAHTSLLGAEQLSDMVFVDQSPIGKTARSNPVSYVGA----WDAIRELFA 892 >UniRef50_C9XKB3 Putative antibiotic resistance ABC transporter, ATP-binding protein n=4 Tax=Clostridium difficile RepID=C9XKB3_CLODC Length = 747 Score = 455 bits (1171), Expect = e-126, Method: Compositional matrix adjust. Identities = 263/675 (38%), Positives = 389/675 (57%), Gaps = 63/675 (9%) Query: 268 FSFNNPAGACPTCDGLGVQQYFDPDRVIQNPELSLAGGAIR-GWDRRNFYYFQMLKSLAD 326 FSFN+P G C C G+G + + + +I NPE S G I + N +Y+ K A+ Sbjct: 126 FSFNDPNGMCKNCSGIGRVKVINIESII-NPENSWNTGCINDSLFKPNSWYW---KQYAE 181 Query: 327 HYKFDVEAPWGSLSANVHKVVLYGSGKENIEFKYMNDRGDTSIRRHPFEGVLHNMERRYK 386 FD++ P S + ++LYGS +N + K N + EG+ + + Y Sbjct: 182 SGLFDLDKPIKDYSFEEYNLLLYGS--KNKDGKQENPK---------IEGIFNKYNQTYL 230 Query: 387 ETE----SSAVREELAKFISNRPCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEF 442 + S +E+ + I+++ C C G RL +E + + + + +M + + Sbjct: 231 NRDISNMSKHTKEKSERLITDKECPVCHGKRLNKETLNCNILGYSIADMCNMELTDLYDL 290 Query: 443 FNNLKLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIG 502 L++ +R E ++K + D LK ++++GL YL L+R + +LSGGEAQR++L +G Sbjct: 291 L--LQIKDKRT---ETVIKTLTDGLKRMIDIGLPYLHLNRESSSLSGGEAQRLKLVRYMG 345 Query: 503 AGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGP 562 + L G+ Y+ DEPS G+H RD R+ L LRD GNTV+VVEHD+D I AD VIDIGP Sbjct: 346 SSLTGMTYIFDEPSAGMHPRDVHRMNQLLKKLRDRGNTVLVVEHDKDVISIADEVIDIGP 405 Query: 563 GAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEVPKKRVPANPEKVLKLTGARGNN 622 AG GG VV +G + ++ + +LT M+ + +P K +P+ L + A NN Sbjct: 406 SAGTQGGHVVFQGSYDKLL-LANTLTSNAMN----LSLPIKTDSRHPKGTLPIRDACINN 460 Query: 623 LKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAEPAPYRDIQGLEHF 682 LK + + LPVG+ T +TGV+GSGKSTLI+ AQ+ + Sbjct: 461 LKHIDVDLPVGIMTVVTGVAGSGKSTLISRVF---AQK--------------------YE 497 Query: 683 DKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESRARGYTPGRFSFNVRGGRCEA 742 VI IDQSP+ T RS PAT+ G F +R++FA + G FSFN +G C Sbjct: 498 KDVIKIDQSPVTATNRSMPATFLGFFDEIRKVFA-----KENNVEEGLFSFNSKGA-CPV 551 Query: 743 CQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDA 802 C G GV+ E+ F+ I C+ CKG RY+ E L YKGK I +VL MT++E+ EFF Sbjct: 552 CDGKGVLVTELVFMDPIINTCEACKGTRYSEEVLSKLYKGKCIVDVLSMTVDESLEFFTE 611 Query: 803 VPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTG 862 L + LQT+ DVGL Y+ LGQ +TLSGGE QR+KLA+ L+K+G T+YILDEPTTG Sbjct: 612 -KKLCKILQTMKDVGLPYMTLGQPLSTLSGGERQRIKLAKNLNKKG---TIYILDEPTTG 667 Query: 863 LHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPE 922 LH +DI++L+ + + D+GNT+++IEHNLDV+K ADW++D+GP+GG GG+++ GTP Sbjct: 668 LHGSDIEKLMLIFEHIVDKGNTVIIIEHNLDVLKQADWVIDIGPDGGKNGGQVVFEGTPL 727 Query: 923 TVAECEASHTARFLK 937 + E + T+ FL+ Sbjct: 728 EMFERGCTITSDFLR 742 Score = 116 bits (291), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 55/118 (46%), Positives = 83/118 (70%) Query: 1 MDKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAY 60 M I ++G +NLKNI+ IP++K++V TG+SGSGKSS+ FDT+ AE QR+ E+ S++ Sbjct: 1 MSNIIIKGLTQNNLKNISFKIPKNKIVVFTGVSGSGKSSIVFDTIAAESQRQMNETYSSF 60 Query: 61 ARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEP 118 R L KP V+ I+ L+ ++ ++Q N RSTVGTI++++ LRLLF+R+GEP Sbjct: 61 IRNRLPKYRKPQVELIDNLTASVIVDQTPLGGNARSTVGTISDLYSSLRLLFSRIGEP 118 Score = 79.7 bits (195), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 48/143 (33%), Positives = 78/143 (54%), Gaps = 8/143 (5%) Query: 615 LTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLN---GATIAEPA 671 + G NNLK+++ +P TGVSGSGKS+++ DT+ +QRQ+N + I Sbjct: 6 IKGLTQNNLKNISFKIPKNKIVVFTGVSGSGKSSIVFDTIAAESQRQMNETYSSFIRNRL 65 Query: 672 P-YR--DIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESRARGYTP 728 P YR ++ +++ + +DQ+P+G RS T + +++ +R LF+ + E T Sbjct: 66 PKYRKPQVELIDNLTASVIVDQTPLGGNARSTVGTISDLYSSLRLLFSRIGEPYIG--TT 123 Query: 729 GRFSFNVRGGRCEACQGDGVIKV 751 FSFN G C+ C G G +KV Sbjct: 124 SYFSFNDPNGMCKNCSGIGRVKV 146 >UniRef50_A6CCN1 Excinuclease ABC subunit A n=1 Tax=Planctomyces maris DSM 8797 RepID=A6CCN1_9PLAN Length = 873 Score = 455 bits (1170), Expect = e-126, Method: Compositional matrix adjust. Identities = 245/542 (45%), Positives = 339/542 (62%), Gaps = 9/542 (1%) Query: 402 SNRPCASCEGTRLRREARHVYVENTPLPAISDM---SIGHAMEFFNNLKLAGQRAKIAEK 458 S C C+G+RL A V V + + + IG +E F+ L K Sbjct: 331 SAETCPHCQGSRLNASALAVRVNGSNIDQLGQQPIQQIGAWLEQFSE-GLTATETKPLAP 389 Query: 459 ILKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIG 518 +L+EI +RL L +GL YLTL+R+ TLS GE QR L S + + LV +YVLDEPS G Sbjct: 390 LLREIRERLSLLNELGLGYLTLNRTRSTLSSGEIQRTALTSLLSSNLVNTLYVLDEPSSG 449 Query: 519 LHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLE 578 LH D+ R+L L LR L NT+++VEHD IRAA++VI++GP AG GGEV+ GPLE Sbjct: 450 LHPADSHRVLTVLQKLRQLNNTLLIVEHDAAFIRAAEYVIELGPAAGRAGGEVIFSGPLE 509 Query: 579 AIMAVPESLTGQYMSGKRKIEVPKKRVPANP-EKVLKLTGARGNNLKDVTLTLPVGLFTC 637 A++A S T ++++ + K VP P + + LT A NNL+++T+ P+ + Sbjct: 510 ALLASNSSPTSRFLNTAENRAL--KSVPDQPTSEWITLTDASRNNLQNITVKFPLRQLSV 567 Query: 638 ITGVSGSGKSTLINDTLFPIAQRQLNGATIAEPAP-YRDIQGLEHFDKVIDIDQSPIGRT 696 +TG+SGSGKS+LI TLFP+ +L+ + A + + G E D+VI +D S G+ Sbjct: 568 VTGISGSGKSSLIEQTLFPLLAAELSETGTSPLADGCQSLSGAEQIDEVILLDHSFTGQN 627 Query: 697 PRSNPATYTGVFTPVRELFAGVPESRARGYTPGRFSFNVR-GGRCEACQGDGVIKVEMHF 755 PRS PATY +F +R +FA P++R R +PG FSFN + GGRC C+G G I++++ F Sbjct: 628 PRSIPATYLNLFDDIRSIFAQTPDARLRNLSPGHFSFNSKSGGRCPVCKGTGKIEIDLQF 687 Query: 756 LPDIYVPCDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMD 815 L DI + C +C GKRY RE LEIKY+ I EVL +T++EA FF PAL +KL+ L D Sbjct: 688 LADISMDCQECHGKRYQRELLEIKYRKLNIAEVLKLTVDEAFPFFRGQPALQKKLKQLKD 747 Query: 816 VGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVL 875 VGL Y+ LGQ TLSGGE QR+KLA L+ +TL++++EPT GLH DIQ +L+ Sbjct: 748 VGLGYLPLGQPLPTLSGGECQRLKLAAYLNTSSRNKTLFLMNEPTRGLHPLDIQSVLNCF 807 Query: 876 HKLRDQGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARF 935 H L G++I++IEHNLD+I+ AD I+DLGPEGG+ GG I+V+GTP VA S+T Sbjct: 808 HYLLTAGHSIILIEHNLDLIRAADHIIDLGPEGGAEGGRIVVTGTPAEVAAHPTSYTGMA 867 Query: 936 LK 937 L Sbjct: 868 LN 869 Score = 196 bits (499), Expect = 3e-48, Method: Compositional matrix adjust. Identities = 117/307 (38%), Positives = 168/307 (54%), Gaps = 28/307 (9%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 63 I+VRG R HNLK+I+L IP ++LI V G+SGSGK+SLAFDTLYAEGQRRY+E+LS ARQ Sbjct: 18 IQVRGVRVHNLKSIDLDIPLNQLIAVCGVSGSGKTSLAFDTLYAEGQRRYLETLSPSARQ 77 Query: 64 FLSLMEKPDVDHIEGLSPAISIEQKS-----TSHNPRSTVGTITEIHDYLRLLFARVGEP 118 +L+ + KPD D I + PAI++ Q + TS +T G + I YLRLLF+ G+ Sbjct: 78 YLNQLPKPDADQITQIPPAIALRQNTSQRHFTSRGLETTAGIESGIQHYLRLLFSASGQI 137 Query: 119 RCPDHDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHT--KTLENLASQGYIR 176 CPD ++P++ Q+ ++ + + P R + P+ E EH+ + ++ L QG R Sbjct: 138 FCPDCEIPISPQSPETVLAFIKTLPTDLRFQICYPVTTE---EHSSPEIMQELKQQGLNR 194 Query: 177 ARIDGEVCDLSDPPKLELQK----KHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTA 232 ++ E LSD L + H I VV+DR R R+ ES E A S G Sbjct: 195 VILNHEEYQLSDDLTEPLSQFDTNTHEILVVLDRLSTRSFDDSRILESLEFAFNESAGKV 254 Query: 233 VVADMDDPKAE--------------ELLFSANFACPICGYSMRELEPRLFSFNNPAGACP 278 + M+ + FSA+ +CP C + EP+LF+F +P+G C Sbjct: 255 TLLVMEPLSGQTTGIPFQIGQRQSFRFDFSADMSCPQCQREFAQPEPQLFNFFSPSGVCT 314 Query: 279 TCDGLGV 285 C G G+ Sbjct: 315 NCGGSGL 321 Score = 132 bits (331), Expect = 9e-29, Method: Compositional matrix adjust. Identities = 76/226 (33%), Positives = 118/226 (52%), Gaps = 18/226 (7%) Query: 728 PGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKYKGKTIHE 787 P F+F G C C G G+I +E C C+G R N L ++ G I + Sbjct: 301 PQLFNFFSPSGVCTNCGGSGLISIESSGGRSAET-CPHCQGSRLNASALAVRVNGSNIDQ 359 Query: 788 VLDMTIEEA----REFFDAVPA------------LARKLQTLMDVGLTYIRLGQSATTLS 831 + I++ +F + + A + +L L ++GL Y+ L ++ +TLS Sbjct: 360 LGQQPIQQIGAWLEQFSEGLTATETKPLAPLLREIRERLSLLNELGLGYLTLNRTRSTLS 419 Query: 832 GGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHN 891 GE QR L LS TLY+LDEP++GLH AD ++L VL KLR NT++++EH+ Sbjct: 420 SGEIQRTALTSLLSSNLVN-TLYVLDEPSSGLHPADSHRVLTVLQKLRQLNNTLLIVEHD 478 Query: 892 LDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLK 937 I+ A+++++LGP G GGE++ SG E + +S T+RFL Sbjct: 479 AAFIRAAEYVIELGPAAGRAGGEVIFSGPLEALLASNSSPTSRFLN 524 Score = 115 bits (287), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 65/191 (34%), Positives = 101/191 (52%), Gaps = 15/191 (7%) Query: 406 CASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGD 465 C C G R +RE + + + +++ A FF GQ A + Sbjct: 695 CQECHGKRYQRELLEIKYRKLNIAEVLKLTVDEAFPFFR-----GQPA---------LQK 740 Query: 466 RLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVG-VMYVLDEPSIGLHQRDN 524 +LK L +VGL YL L + TLSGGE QR++LA+ + +++++EP+ GLH D Sbjct: 741 KLKQLKDVGLGYLPLGQPLPTLSGGECQRLKLAAYLNTSSRNKTLFLMNEPTRGLHPLDI 800 Query: 525 ERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVP 584 + +L +L G+++I++EH+ D IRAADH+ID+GP G GG +V G + A P Sbjct: 801 QSVLNCFHYLLTAGHSIILIEHNLDLIRAADHIIDLGPEGGAEGGRIVVTGTPAEVAAHP 860 Query: 585 ESLTGQYMSGK 595 S TG ++ K Sbjct: 861 TSYTGMALNAK 871 Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 40/117 (34%), Positives = 57/117 (48%), Gaps = 7/117 (5%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVES-LSAYAR 62 I + A +NL+NI + P +L VVTG+SGSGKSSL TL+ E+ S A Sbjct: 543 ITLTDASRNNLQNITVKFPLRQLSVVTGISGSGKSSLIEQTLFPLLAAELSETGTSPLAD 602 Query: 63 QFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPR 119 SL +D + I ++ T NPRS T + D +R +FA+ + R Sbjct: 603 GCQSLSGAEQIDEV------ILLDHSFTGQNPRSIPATYLNLFDDIRSIFAQTPDAR 653 Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust. Identities = 22/62 (35%), Positives = 38/62 (61%) Query: 600 VPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQ 659 +P + +P ++++ G R +NLK + L +P+ + GVSGSGK++L DTL+ Q Sbjct: 5 LPDETAFQHPSSMIQVRGVRVHNLKSIDLDIPLNQLIAVCGVSGSGKTSLAFDTLYAEGQ 64 Query: 660 RQ 661 R+ Sbjct: 65 RR 66 >UniRef50_C6R915 UvrABC system protein A n=2 Tax=Corynebacterium RepID=C6R915_9CORY Length = 806 Score = 440 bits (1132), Expect = e-121, Method: Compositional matrix adjust. Identities = 261/686 (38%), Positives = 386/686 (56%), Gaps = 33/686 (4%) Query: 268 FSFNNPAGACPTCDGLGVQQYFDPDRVIQNPELSLAGGAIRGWDR----RNFYYFQMLKS 323 FS N P G CP C G GV D ++ +P LS+ GAI+ W +NF+ M Sbjct: 133 FSPNTPEGMCPQCHGTGVVHEPTEDSMVPDPTLSIEEGAIQAWPGAWAGKNFHDILM--- 189 Query: 324 LADHYKFDVEAPWGSLSANVHKVVLYGSGKENIEFKYMNDRGDTSIRRHPFEGVLHN--- 380 + +D+++PW L +L+ + + K + RG I+R+ +EG + Sbjct: 190 ---NLGYDLDSPWQELPQEDRDWILFTEERPVVTVKPL--RGKDQIQRN-YEGTWRSVAS 243 Query: 381 -MERRYKETESSAVREELAKFISNRPCASCEGTRLRREARHVYVENTPLPAISDMSIGHA 439 + + ET+S +R+ ++ +R C +C G RL A V P+ + + + Sbjct: 244 YLNKTLAETQSDTLRKRTLSYMESRECETCGGRRLNPAALKVTYAGMPIDELGALPLDRV 303 Query: 440 MEFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLAS 499 E + K + + +L++I L + +GL +L+L R ++LSGGE QRIRLA+ Sbjct: 304 HEVLS--KQNPEENSAEDLLLRQILPALTSALELGLAHLSLDRPTQSLSGGEMQRIRLAA 361 Query: 500 QIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVID 559 Q+ +GL GV YVLDEPS GLH + + ++ GN+V++VEHD D + AD ++D Sbjct: 362 QLRSGLFGVAYVLDEPSAGLHPDERDAVMDMCRRFIAAGNSVLLVEHDMDLVAQADWLVD 421 Query: 560 IGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEVPKKRVPANPEKVLKLTGAR 619 +GP AG GG VV GP+E A ++ T ++ R + + P P L L G Sbjct: 422 VGPLAGERGGNVVYSGPVEDYDA--DTPTANALA-HRTLTLSDD--PRTPSSHLALRGIN 476 Query: 620 GNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAEPAPYR--DIQ 677 ++ ++ + +G FT + GVSGSGKSTL++ L + ++ + E + ++ Sbjct: 477 ARSIDNLDVDFGLGQFTAVAGVSGSGKSTLVSTVLAGLLRQSATAVSDEEETEDKGWSVE 536 Query: 678 GLEHFDKV---IDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESRARGYTPGRFSFN 734 E FD+V + I Q PIGRTPRS ATYTG+F VR+LFA E++ R +T RFS+N Sbjct: 537 STEGFDRVKRVVQITQKPIGRTPRSTLATYTGLFDNVRKLFASTDEAKQRKWTVSRFSYN 596 Query: 735 VRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKYKGKTIHEVLDMTIE 794 V+ G+C C G G I+VE+ FLP Y C +C G R+N ETLE+ ++G+TI ++L++T++ Sbjct: 597 VKQGQCPTCGGAGKIEVELVFLPGSYTTCPECGGARFNDETLEVTWQGRTIADILELTVD 656 Query: 795 EAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGT---GQ 851 EA E F + R + TL VGL Y+RLGQ A LSGGEAQR+KLA EL + G Sbjct: 657 EAAEVFAEEEKIYRAIATLQAVGLGYLRLGQGAPELSGGEAQRIKLATELQRSRNSRRGH 716 Query: 852 TLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADWIVDLGPEGGSG 911 T+Y+LDEPTTGLH ADI L LHKL D G+T++V+EH+L V+ AD I+++GP G Sbjct: 717 TVYLLDEPTTGLHPADIDLLNTELHKLADAGHTVIVVEHDLSVMANADRIIEMGPGAGED 776 Query: 912 GGEILVSGTPETVAECEASHTARFLK 937 GG I+ TP VA E + T R L Sbjct: 777 GGRIIADATPAQVA-AEDTATGRALS 801 Score = 127 bits (319), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 56/117 (47%), Positives = 87/117 (74%) Query: 1 MDKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAY 60 M I+VR A HNL+N+++ +PR KL+ VTG+SGSGKSSLAF T++ EGQRRY+ES++ + Sbjct: 7 MSTIKVRDAHLHNLRNVDVDMPRGKLVAVTGVSGSGKSSLAFGTIHGEGQRRYLESVAPF 66 Query: 61 ARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGE 117 AR+ +S P V +EGL P ++++Q ++ RSTVGT++ + + +RLL++R G+ Sbjct: 67 ARRLISSAVDPQVSQVEGLPPTVALQQSTSGGGARSTVGTVSALSNSVRLLYSRAGD 123 Score = 58.9 bits (141), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 49/191 (25%), Positives = 82/191 (42%), Gaps = 22/191 (11%) Query: 611 KVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAEP 670 +K+ A +NL++V + +P G +TGVSGSGKS+L T+ QR+ + Sbjct: 8 STIKVRDAHLHNLRNVDVDMPRGKLVAVTGVSGSGKSSLAFGTIHGEGQRRY----LESV 63 Query: 671 APYR----------DIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPE 720 AP+ + +E + + QS G RS T + + VR L++ + Sbjct: 64 APFARRLISSAVDPQVSQVEGLPPTVALQQSTSGGGARSTVGTVSALSNSVRLLYSRAGD 123 Query: 721 SRARGYTPGRFSFNVRGGRCEACQGDGVIK--VEMHFLPDIYVPCDQCKGKRYNRETLEI 778 + G FS N G C C G GV+ E +PD + ++ + + Sbjct: 124 N-PEGLYSDSFSPNTPEGMCPQCHGTGVVHEPTEDSMVPDPTLSIEEGAIQAWPG----- 177 Query: 779 KYKGKTIHEVL 789 + GK H++L Sbjct: 178 AWAGKNFHDIL 188 Score = 44.3 bits (103), Expect = 0.022, Method: Compositional matrix adjust. Identities = 35/119 (29%), Positives = 58/119 (48%), Gaps = 7/119 (5%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 63 + +RG ++ N+++ + V G+SGSGKS+L L G R +S +A + + Sbjct: 470 LALRGINARSIDNLDVDFGLGQFTAVAGVSGSGKSTLVSTVL--AGLLR--QSATAVSDE 525 Query: 64 FLSLMEKPDVDHIEG---LSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPR 119 + + V+ EG + + I QK PRST+ T T + D +R LFA E + Sbjct: 526 EETEDKGWSVESTEGFDRVKRVVQITQKPIGRTPRSTLATYTGLFDNVRKLFASTDEAK 584 >UniRef50_Q041B5 Excinuclease ATPase subunit n=53 Tax=Lactobacillaceae RepID=Q041B5_LACGA Length = 846 Score = 436 bits (1122), Expect = e-120, Method: Compositional matrix adjust. Identities = 250/698 (35%), Positives = 390/698 (55%), Gaps = 32/698 (4%) Query: 251 FACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPELSLAGGAIRGW 310 C +CG F+FN+ GAC C G G + D ++I +P LS+ GA+ W Sbjct: 160 LTCLVCGVKFYAPSAEQFAFNSD-GACEECGGTGKVRQLDDSKLIADPRLSIKDGAVASW 218 Query: 311 DR--RNFYYFQMLKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKENIEFKY-MNDRGDT 367 RNF + ++A+H ++ P+ L+ VL G K KY M+ T Sbjct: 219 SLPGRNF-----MPNVAEHAGVRIDIPYKDLTDKEKDFVLNGPEK-----KYKMDFLSGT 268 Query: 368 SIRRHPFEGVLHNME----RRYKETESSAVREELAKFISNRPCASCEGTRLRREARHVYV 423 H F + N R K ++S ++ +++F S + C C G+RL+ E V Sbjct: 269 GRVFHNFNALYENAHQAVLRSAKTSKSERAQKRISEFFSYQICPVCHGSRLKPELLKQLV 328 Query: 424 ENTPLPAISDMSIGHAMEF----FNNLKLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLT 479 + + +++M +G + + F +L + Q K+A + E D L+ L+++GL+YLT Sbjct: 329 GSLNINEVAEMPLGDLIAWKDQVFKSLPVDMQ--KMANALFTEFVDNLQPLLDLGLDYLT 386 Query: 480 LSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGN 539 ++R+ TLS GE QRI+LA + GV+Y+LDEPSIGLH + + L+ L L GN Sbjct: 387 MARNGNTLSTGELQRIQLARTLRTETTGVLYILDEPSIGLHPANVDGLIKVLHKLVAQGN 446 Query: 540 TVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIE 599 +++VV+H+ D I+AAD +I+IGPG+G GGE++ +G ++ I +SL Y+ G + Sbjct: 447 SLVVVDHNVDIIKAADEIIEIGPGSGEQGGEILDQGSVDQIKKDKQSLIRPYLDGTAALM 506 Query: 600 VPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQ 659 K+ N K+ NL+DV +PV T +TG SG+GK++LI D+L P Q Sbjct: 507 ARKRAEKINSVKI-SFDVDHYFNLQDVHAAIPVNQLTAVTGFSGAGKTSLILDSLVPAIQ 565 Query: 660 RQLNGATIAEPAPYRDIQGLEH-FDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGV 718 Q G T+ + ++ E ++V+ +D SPIG++ RS ATYT + +R+LFA Sbjct: 566 AQAKGETLP-----KQVKNFESPINQVVSVDASPIGKSTRSTVATYTSIMDNLRKLFARQ 620 Query: 719 PESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEI 778 ++ + YTP FS+N + G C C G G++ +++ FLPD+ C C+G RYN E ++ Sbjct: 621 SLAKEKHYTPTYFSYNNKQGACPTCGGTGIVTLDIQFLPDMQQTCPTCEGNRYNHEVQKV 680 Query: 779 KYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRV 838 K+ +I ++L++ I EA F P + R L L +VGL Y+ LG+S TLSGGEAQR+ Sbjct: 681 KWNSYSIVDILNLDINEALPVFKKEPKIERDLLLLKEVGLDYLHLGESTPTLSGGEAQRL 740 Query: 839 KLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTA 898 KL LS + TL++ DEPT GLH D++ L+ V+ KL DQG TI+ I H+L++I A Sbjct: 741 KLVTHLSHK-QNDTLFVFDEPTIGLHPLDVKVLVQVIQKLLDQGATIITITHDLNMIVNA 799 Query: 899 DWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFL 936 D I+DLGP GG GG+++ +G + + + S T +L Sbjct: 800 DNILDLGPRGGKNGGKVVAAGQTQDLIDHPVSLTTEYL 837 Score = 117 bits (293), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 67/188 (35%), Positives = 102/188 (54%), Gaps = 14/188 (7%) Query: 406 CASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGD 465 C +CEG R E + V + + I ++ I A+ F + KI +L Sbjct: 665 CPTCEGNRYNHEVQKVKWNSYSIVDILNLDINEALPVFK------KEPKIERDLL----- 713 Query: 466 RLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNE 525 L VGL+YL L S TLSGGEAQR++L + + ++V DEP+IGLH D + Sbjct: 714 ---LLKEVGLDYLHLGESTPTLSGGEAQRLKLVTHLSHKQNDTLFVFDEPTIGLHPLDVK 770 Query: 526 RLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPE 585 L+ + L D G T+I + HD + I AD+++D+GP G +GG+VVA G + ++ P Sbjct: 771 VLVQVIQKLLDQGATIITITHDLNMIVNADNILDLGPRGGKNGGKVVAAGQTQDLIDHPV 830 Query: 586 SLTGQYMS 593 SLT +Y++ Sbjct: 831 SLTTEYLA 838 Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 56/120 (46%), Positives = 85/120 (70%) Query: 3 KIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYAR 62 +IEVRG R HNLKNI++ IP K + ++GLSGSGKSSLA LY EG RRY+++LS Y R Sbjct: 17 QIEVRGGRVHNLKNIDVNIPLHKFVAISGLSGSGKSSLAMGILYEEGSRRYLDALSTYMR 76 Query: 63 QFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCPD 122 + + + +V ++ + A+++ Q+ T + R+TVGT++E + LRL+F+R+G P CP+ Sbjct: 77 RRIKQGNQANVISVKHIPSALALRQRPTIPSERATVGTMSETFNILRLIFSRLGSPVCPN 136 Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 37/103 (35%), Positives = 55/103 (53%), Gaps = 12/103 (11%) Query: 13 NLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYV-ESLSAYARQFLSLMEKP 71 NL++++ IP ++L VTG SG+GK+SL D+L Q + E+L + F E P Sbjct: 528 NLQDVHAAIPVNQLTAVTGFSGAGKTSLILDSLVPAIQAQAKGETLPKQVKNF----ESP 583 Query: 72 DVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFAR 114 ++ +S++ + RSTV T T I D LR LFAR Sbjct: 584 -------INQVVSVDASPIGKSTRSTVATYTSIMDNLRKLFAR 619 >UniRef50_C4DT53 Excinuclease ATPase subunit n=3 Tax=Bacteria RepID=C4DT53_9ACTO Length = 780 Score = 432 bits (1112), Expect = e-119, Method: Compositional matrix adjust. Identities = 260/697 (37%), Positives = 373/697 (53%), Gaps = 76/697 (10%) Query: 267 LFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPELSLAGGAIRGWDRRNFYYFQMLKSLAD 326 +FSFN+PAG C C GLG D D + + SL GA+ D + +F + S + Sbjct: 129 VFSFNDPAGMCERCQGLGRVVTVDMDEFVDMSK-SLNEGALLHPDFKVGKWFWNMYSASG 187 Query: 327 HYKFDVEAPWGSLSANVHKVVLYGSGKENIEFKYMNDRGDTSIRRHPFEGVLHNMER--- 383 FD++ P ++ +G+ + I F + + +EG + R Sbjct: 188 F--FDMDKPLAEYGKEELDILFHGTDAK-IPFAW-----EGGTINSKYEGAVEKFTRLIM 239 Query: 384 -RYKETESSAVREELAKFISNRPCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEF 442 + E S R +F + C +CEG RL + R + + ++ M I + Sbjct: 240 SKSAEEMSDRNRAIFERFTTTGVCDACEGLRLNEKVRSCKLAGLHIAEMASMEITDLVRV 299 Query: 443 FNNLKLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIG 502 L+G ++++L + +RL L+ +GL YL+L R+ +LSGGE+QRI+ + Sbjct: 300 -----LSGVDGGSSQRVLDSLLERLDHLITIGLGYLSLHRATGSLSGGESQRIKTVRNLN 354 Query: 503 AGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGP 562 + L +MY+ DEPSIGLH RD R+ L+ LRD GNTV+VVEHD D I ADHVID+GP Sbjct: 355 SSLTEMMYIFDEPSIGLHARDVHRMNELLVKLRDKGNTVLVVEHDPDVIAVADHVIDVGP 414 Query: 563 GAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEVPKKRVPANPEKVLKLTGARGNN 622 GAG HGG +V EGP+ A + ++ TG + +R+ + + AN + + +N Sbjct: 415 GAGTHGGTIVYEGPV-AGLKEADTPTGAQL--RRRSGLKDETRAANGK--YPVADVNSHN 469 Query: 623 LKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAEPAPYRDIQGLEHF 682 + V++ P G+ T +TGV+GSGKSTL+ + L +H Sbjct: 470 VSGVSVDFPAGVLTVVTGVAGSGKSTLVTEGLLT-----------------------QHP 506 Query: 683 DKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESRARGYTPGRFSFNVRGGRCEA 742 D ++ IDQ+ + RSN ATYTG+ +R+LFA V G P FSFN G C Sbjct: 507 DAIV-IDQTAVAANRRSNTATYTGLADGIRKLFANV-----NGVKPSLFSFNSDGA-CPD 559 Query: 743 CQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDA 802 CQG GVI ++ F+ + PC+ C+GKR+ E L +GK I +VL++T EEA EFF Sbjct: 560 CQGHGVIYTDLAFMDGVKTPCETCEGKRFKSEVLAHTVRGKNISDVLNLTAEEAAEFFTE 619 Query: 803 VPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKR------------GTG 850 L L+ L DVGL Y+ LGQ TLSGGE QR+KLA ELS G+G Sbjct: 620 -KKLRTVLRALNDVGLDYLTLGQPLNTLSGGECQRIKLATELSSMYSQASPAPTGSIGSG 678 Query: 851 ----------QTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADW 900 LY++DEPTTGLH +DI++LL + L D GNT+++IEHN+DVIK ADW Sbjct: 679 ARASSFSARLNRLYVMDEPTTGLHMSDIEKLLGLFDHLVDSGNTVIIIEHNMDVIKHADW 738 Query: 901 IVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLK 937 I+DLGP+GGS GG ++ GTP + + SHT FL+ Sbjct: 739 IIDLGPDGGSSGGRVMFEGTPRQLLDTRGSHTGDFLR 775 Score = 127 bits (320), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 63/116 (54%), Positives = 84/116 (72%) Query: 3 KIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYAR 62 I++ GAR +NLKNI++ IP+ ++ V TG+SGSGKSS+ FDT+ AE QR+ E+ SA+ R Sbjct: 7 SIDITGARENNLKNIDITIPKHRITVFTGVSGSGKSSIVFDTVAAEAQRQINETHSAFVR 66 Query: 63 QFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEP 118 FL +PD D IE LS AI I+Q+ N RSTVGTIT+I+ LRLL++RVG P Sbjct: 67 GFLPKYGQPDADAIENLSAAIIIDQQRLGGNSRSTVGTITDIYTLLRLLYSRVGSP 122 Score = 90.1 bits (222), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 59/154 (38%), Positives = 82/154 (53%), Gaps = 9/154 (5%) Query: 613 LKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAEPAP 672 + +TGAR NNLK++ +T+P T TGVSGSGKS+++ DT+ AQRQ+N A Sbjct: 8 IDITGARENNLKNIDITIPKHRITVFTGVSGSGKSSIVFDTVAAEAQRQINETHSAFVRG 67 Query: 673 YR------DIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESRARGY 726 + D +E+ I IDQ +G RS T T ++T +R L++ V G Sbjct: 68 FLPKYGQPDADAIENLSAAIIIDQQRLGGNSRSTVGTITDIYTLLRLLYSRVGSPNIGGA 127 Query: 727 TPGRFSFNVRGGRCEACQGDG-VIKVEMHFLPDI 759 FSFN G CE CQG G V+ V+M D+ Sbjct: 128 YV--FSFNDPAGMCERCQGLGRVVTVDMDEFVDM 159 Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust. Identities = 44/160 (27%), Positives = 59/160 (36%), Gaps = 44/160 (27%) Query: 3 KIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYAR 62 K V +HN+ +++ P L VVTG++GSGKS+L + L Sbjct: 459 KYPVADVNSHNVSGVSVDFPAGVLTVVTGVAGSGKSTLVTEGL----------------- 501 Query: 63 QFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGE----- 117 L + PD AI I+Q + + N RS T T + D +R LFA V Sbjct: 502 ----LTQHPD---------AIVIDQTAVAANRRSNTATYTGLADGIRKLFANVNGVKPSL 548 Query: 118 ---------PRCPDHDVPLAAQTVSQMVDNVLSQPEGKRL 148 P C H V V EGKR Sbjct: 549 FSFNSDGACPDCQGHGVIYTDLAFMDGVKTPCETCEGKRF 588 >UniRef50_C3PKK6 Excinuclease ABC, subunit A n=10 Tax=Actinomycetales RepID=C3PKK6_CORA7 Length = 793 Score = 431 bits (1107), Expect = e-119, Method: Compositional matrix adjust. Identities = 266/695 (38%), Positives = 381/695 (54%), Gaps = 43/695 (6%) Query: 256 CGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPELSLAGGAIRGWDR--- 312 CG + L FS N P G CP C G GV ++ +P LS+ GAI W Sbjct: 124 CGDNPEGLYSDSFSPNTPEGMCPECQGTGVVHEPTEASMVPDPSLSIEEGAIAAWPGAWA 183 Query: 313 -RNFYYFQMLKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKENIEFKYMNDRGDTSIRR 371 +NF+ +L+ L +D+++PW L + +L+ + + K RG I+R Sbjct: 184 GKNFH--DILQELG----YDLDSPWEDLPKKDREWILFTEERPVVTVK--PRRGADQIQR 235 Query: 372 HPFEGVLHN----MERRYKETESSAVREELAKFISNRPCASCEGTRLRREARHVYVENTP 427 + +EG + + + Y ET+S +R + F+ R C +C+G RL +A V P Sbjct: 236 N-YEGTWRSVASYLTKTYAETKSDTLRARVLSFMETRRCDTCQGRRLTAKALKVTYAGLP 294 Query: 428 LPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTLSRSAETL 487 + + + + A E N + Q + +LK + + + +GL +L+L R +TL Sbjct: 295 IDEFNALPLSEAYELLNGQ--SPQPNDAEDLLLKALLPAFESALELGLGHLSLDRPTDTL 352 Query: 488 SGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHD 547 SGGE QR+RLA+Q+ +GL GV YVLDEPS GLH + +L GN+V++VEHD Sbjct: 353 SGGEVQRLRLAAQLRSGLYGVTYVLDEPSAGLHPVERGAVLDVCRRFIAEGNSVLLVEHD 412 Query: 548 EDAIRAADHVIDIGPGAGVHGGEVVAEGPL-EAIMAVPESLTGQYMSGKRKIEVPKKRV- 605 + ++ AD ++D+GP AG GG+VV GP+ + I A + T + R PK Sbjct: 413 MELVKQADWLVDVGPLAGERGGQVVYSGPVADYIEAADSADTPTARALARPRPTPKADAR 472 Query: 606 PANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGA 665 PA+ E L+ + + DV L G FT ITG+SGSGKSTL+ L G Sbjct: 473 PAHGEIPLRQVHSHTIDGLDVDFGL--GQFTAITGLSGSGKSTLLA-----ALHDMLTGP 525 Query: 666 TIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESRARG 725 E +V+ I Q PIGRTPRS ATYT +F VR+LFA PE++ + Sbjct: 526 VCPE-----------QVKRVVSITQKPIGRTPRSTVATYTNLFDNVRKLFAATPEAKKKK 574 Query: 726 YTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKYKGKTI 785 +T RFS+NV+ +C C G G I+VE+ FLP Y C C+G+RYN +TL I+++G+TI Sbjct: 575 WTVSRFSYNVKQSQCHTCGGAGQIEVELVFLPGSYTQCPDCQGQRYNDDTLSIRWQGRTI 634 Query: 786 HEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELS 845 ++LD+T+EEA E F + LQTL VGL Y+RLGQ A LSGGEAQR+KLA EL Sbjct: 635 ADILDLTVEEALEVFADEAPILHALQTLEAVGLGYLRLGQGAPELSGGEAQRIKLATELQ 694 Query: 846 KRGT---GQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADWIV 902 + G T+Y+LDEPT GLH ADI L+ LH L D +++VV +H+ +I AD ++ Sbjct: 695 RSRNSRRGHTVYLLDEPTVGLHPADIDLLITELHSLVDASHSVVVADHDRHLIAGADRVI 754 Query: 903 DLGPEGGSGGGEILVSGTPETVAECEASHTARFLK 937 ++GP G GG+I+ GTP VA E + T R L Sbjct: 755 EMGPGSGVEGGQIVADGTPAQVAAGE-TPTGRVLS 788 Score = 116 bits (291), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 55/114 (48%), Positives = 87/114 (76%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 63 I VR A HNL+N+++ +PR +L+ VTG+SGSGKSSLAF T++ EGQRRY+ES++ +AR+ Sbjct: 13 ISVRDAHLHNLRNVDVDLPRGQLVAVTGVSGSGKSSLAFGTIHGEGQRRYLESVAPFARR 72 Query: 64 FLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGE 117 ++ P V IEGL P ++++Q +++ + RSTVGTI+ + + +RLL++R G+ Sbjct: 73 LIASAVDPQVGRIEGLPPTVALQQSASASSARSTVGTISAMSNSVRLLYSRCGD 126 Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 50/183 (27%), Positives = 80/183 (43%), Gaps = 26/183 (14%) Query: 621 NNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLF------------PIAQRQLNGATIA 668 +NL++V + LP G +TGVSGSGKS+L T+ P A+R + A+ Sbjct: 21 HNLRNVDVDLPRGQLVAVTGVSGSGKSSLAFGTIHGEGQRRYLESVAPFARRLI--ASAV 78 Query: 669 EPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESRARGYTP 728 +P R +E + + QS + RS T + + VR L++ ++ G Sbjct: 79 DPQVGR----IEGLPPTVALQQSASASSARSTVGTISAMSNSVRLLYSRCGDN-PEGLYS 133 Query: 729 GRFSFNVRGGRCEACQGDGVIK--VEMHFLPDIYVPCDQCKGKRYNRETLEIKYKGKTIH 786 FS N G C CQG GV+ E +PD + ++ + + GK H Sbjct: 134 DSFSPNTPEGMCPECQGTGVVHEPTEASMVPDPSLSIEEGAIAAWPG-----AWAGKNFH 188 Query: 787 EVL 789 ++L Sbjct: 189 DIL 191 >UniRef50_B1KWH8 Excinuclease ABC, A subunit n=7 Tax=Clostridium RepID=B1KWH8_CLOBM Length = 790 Score = 423 bits (1088), Expect = e-116, Method: Compositional matrix adjust. Identities = 245/698 (35%), Positives = 387/698 (55%), Gaps = 58/698 (8%) Query: 262 ELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPELSLAG-----GAIRGWDRRNFY 316 +L+ FS+ +P G C C G G + D+VI N E+++ GA G Sbjct: 128 KLDSSYFSYTSPNGMCMKCGGRGKYFNVNIDKVIPNNEITMQQVFKNIGATSG------- 180 Query: 317 YFQMLKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKENIEFKYMNDRGDTSIRRHPFEG 376 Y +L+ Y + P+ L ++ ++YG N ++ + E Sbjct: 181 YMNLLQRKYHEYFY---TPFNQLPYDIKDELIYGIPTNN-----------SNNLSYCVER 226 Query: 377 VLHNMERRYKETESSAVREELAKFISNRPCASCEGTRLRREARHVYVENTPLPAISDMSI 436 VLHN RY + E+ L C SC G R+ EAR V++ + + + +M++ Sbjct: 227 VLHN---RYLQGEN------LKGIYEMETCESCHGFRVGEEARSVFLNHRHIGEVGNMTL 277 Query: 437 GHAMEFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIR 496 ++ L K K+ I ++ L+ V L +LTL R +LSGGE QRI Sbjct: 278 SQVNDYLQELLPQNTLTKFGVKMTNTILKKINALIRVRLGHLTLYREMPSLSGGELQRIF 337 Query: 497 LASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADH 556 L S + +G+ ++Y+ DEP+ GLH+ + + +L +++ L+ GNTVI+VEHD+ I+ A+H Sbjct: 338 LNSHLDSGMDSLIYIFDEPTSGLHEFEKQEILQSILKLKKSGNTVIIVEHDKSTIKLAEH 397 Query: 557 VIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEV-PKKRVPANPEKVLKL 615 +ID+GP AG++GG++V +G E ++ S+TG+Y+SG+ V +K + + + Sbjct: 398 IIDVGPKAGIYGGDIVYQGSFEGLLNAKHSITGKYLSGRTPFPVRQRKNLSKTNTNHITI 457 Query: 616 TGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQL--NGATIAEPAPY 673 A+ NNLKD+T+++P+ I GVSGSGKS+LI+ TL P+ + N I Y Sbjct: 458 HNAKTNNLKDLTVSIPLNQLVGIAGVSGSGKSSLISKTLLPLLKNSFYRNTQRIQFDEDY 517 Query: 674 RD-----------IQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESR 722 + I G+E+ ++I Q+PIGR S P +Y ++ +R LF+ P++ Sbjct: 518 DENISLFRPIVNQIDGMENIQGYVEISQAPIGRKMNSTPISYLELWDKIRTLFSQQPKAM 577 Query: 723 ARGYTPGRFSFNVRGGRCEACQGDGV----IKVEMHFLPDIYVPCDQCKGKRYNRETLEI 778 + G FSFN +G C+ C+G G+ I ++HF C +C GKR+N +TL I Sbjct: 578 QNNLSAGHFSFNSKGA-CQICKGSGLETISIGNDIHFDK----SCHECNGKRFNHDTLSI 632 Query: 779 KYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRV 838 K+KGK I++VL+M+I EA FF+ + L+ L +G+ YI+LGQ TLSGGEAQR+ Sbjct: 633 KFKGKDIYDVLEMSIIEAITFFEDTKLSFKPLKVLEQIGMGYIKLGQPIPTLSGGEAQRI 692 Query: 839 KLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTA 898 KLA+E+ K+ G LYILDEP+TGL D +L+ +L +L GN+++VIEH+LD++ + Sbjct: 693 KLAKEIGKQKKGNILYILDEPSTGLSQYDTAKLITLLDELIIDGNSVIVIEHDLDILSSC 752 Query: 899 DWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFL 936 DWI++LG GG GG +L GTP+ + E + S T R+L Sbjct: 753 DWIIELGKGGGIEGGNLLAEGTPQQLKENKDSLTGRYL 790 Score = 105 bits (261), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 58/119 (48%), Positives = 81/119 (68%), Gaps = 8/119 (6%) Query: 1 MDKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAY 60 M KI+++ A HNLKNI++ IP+DKLIVVTG+SGSGKSSL FD ++ EG+++Y++SL Sbjct: 1 MKKIKIKNAHMHNLKNIDITIPKDKLIVVTGVSGSGKSSLIFDLIFEEGRKQYLQSLG-- 58 Query: 61 ARQFLSL-MEKPDVDHIEGLSPAISIEQKSTSH-NPRSTVGTITEIHDYLRLLFARVGE 117 +SL + D I GLSP I+++Q N RSTVG+ T I + L LLF+ G+ Sbjct: 59 ----MSLEFDDNKFDSITGLSPTIAVKQSLVRQTNSRSTVGSKTGILNMLALLFSNDGK 113 Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 45/152 (29%), Positives = 70/152 (46%), Gaps = 18/152 (11%) Query: 611 KVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQ----LNGAT 666 K +K+ A +NLK++ +T+P +TGVSGSGKS+LI D +F ++Q L + Sbjct: 2 KKIKIKNAHMHNLKNIDITIPKDKLIVVTGVSGSGKSSLIFDLIFEEGRKQYLQSLGMSL 61 Query: 667 IAEPAPYRDIQGLEHFDKVIDIDQSPIGRT-PRSNPATYTGVFTPVRELFA--GVPESRA 723 + + I GL I + QS + +T RS + TG+ + LF+ G + Sbjct: 62 EFDDNKFDSITGLS---PTIAVKQSLVRQTNSRSTVGSKTGILNMLALLFSNDGKMVNEE 118 Query: 724 RGYTPG--------RFSFNVRGGRCEACQGDG 747 + G FS+ G C C G G Sbjct: 119 TNFNIGDDEKLDSSYFSYTSPNGMCMKCGGRG 150 Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 40/140 (28%), Positives = 70/140 (50%), Gaps = 27/140 (19%) Query: 2 DKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTL--------YAEGQR-- 51 + I + A+T+NLK++ + IP ++L+ + G+SGSGKSSL TL Y QR Sbjct: 453 NHITIHNAKTNNLKDLTVSIPLNQLVGIAGVSGSGKSSLISKTLLPLLKNSFYRNTQRIQ 512 Query: 52 ---RYVESLSAYARQFLSLMEKPDVDHIEGLSPA---ISIEQKSTSHNPRSTVGTITEIH 105 Y E++S + +P V+ I+G+ + I Q ST + E+ Sbjct: 513 FDEDYDENISLF---------RPIVNQIDGMENIQGYVEISQAPIGRKMNSTPISYLELW 563 Query: 106 DYLRLLFARVGEPRCPDHDV 125 D +R LF++ +P+ +++ Sbjct: 564 DKIRTLFSQ--QPKAMQNNL 581 >UniRef50_UPI00019058DE excinuclease ABC subunit A n=1 Tax=Rhizobium etli Kim 5 RepID=UPI00019058DE Length = 501 Score = 422 bits (1085), Expect = e-116, Method: Compositional matrix adjust. Identities = 237/502 (47%), Positives = 321/502 (63%), Gaps = 26/502 (5%) Query: 1 MDKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAY 60 + I +RGAR HNLK+I+L +PR+KLIV+TGLSGSGKSSLAFDT+YAEGQRRYVESLSAY Sbjct: 4 LKTISIRGAREHNLKSIDLDLPRNKLIVMTGLSGSGKSSLAFDTIYAEGQRRYVESLSAY 63 Query: 61 ARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRC 120 ARQFL +M+KPDVD I+ LSP + P VGT ++ Y L R P Sbjct: 64 ARQFLEMMQKPDVDQIDRLSPGHFDRAEDHLAKPALDVGTSRDLRLYAPALCPR-RRPYS 122 Query: 121 PDHDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARID 180 P +P+ +QTVSQMVD +L+ EG RL +LAP+++ RKGE+ K L L +G+ R ++D Sbjct: 123 PATGLPIESQTVSQMVDRILAFGEGTRLYILAPLVRGRKGEYKKELAELMKKGFQRVKVD 182 Query: 181 GEVCDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVADMDDP 240 G+ ++++ P L+ + KH I+VVVDR VR D++ RLA+S ET L+L+ G AV D P Sbjct: 183 GQFYEIAEAPVLDKKYKHDIDVVVDRIVVRSDVSARLADSLETCLKLADGLAVAEFADKP 242 Query: 241 ------------------KAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDG 282 E +LFS FACP+ G+++ E+EPRLFSFNNP GACPTCDG Sbjct: 243 LPPEETSAGGSANKSLNETHERVLFSEKFACPVSGFTIPEIEPRLFSFNNPFGACPTCDG 302 Query: 283 LGVQQYFDPDRVIQNPELSLAGGAIRGWDRRNF-YYFQMLKSLADHYKFDVEAPWGSLSA 341 LG QQ DPD ++ PE +L GAI W + YY Q L++L HY F + W LSA Sbjct: 303 LGAQQKIDPDLIVPEPERTLRDGAIAPWAKSTSPYYNQTLEALGKHYGFKLGTRWNDLSA 362 Query: 342 NVHKVVLYGSGKENIEFKYMNDRGDTSIRRHP-FEGVLHNMERRYKETESSAVREELAKF 400 V+L G+ + IEF Y + G S H FEG++ N+ERR+KET+S+ RE++ +F Sbjct: 363 EAKDVILNGT-DDKIEFHYAD--GARSFTTHKNFEGIITNLERRWKETDSAWAREDIERF 419 Query: 401 ISNRPCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNL--KLAGQRAKIAEK 458 +S PC +C G RL+ EA V + + +++MSI A ++F L ++ +IA + Sbjct: 420 MSAAPCPACNGYRLKPEALAVKINRLHIGEVTEMSIRVARDWFETLPASFNAKQNEIAVR 479 Query: 459 ILKEIGDRLKFLVNVGLNYLTL 480 ILKEI DRL+FL +VGL YL+L Sbjct: 480 ILKEIRDRLRFLNDVGLEYLSL 501 Score = 49.7 bits (117), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 36/121 (29%), Positives = 57/121 (47%), Gaps = 3/121 (2%) Query: 611 KVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAEP 670 K + + GAR +NLK + L LP +TG+SGSGKS+L DT++ QR+ + A Sbjct: 5 KTISIRGAREHNLKSIDLDLPRNKLIVMTGLSGSGKSSLAFDTIYAEGQRRYVESLSAYA 64 Query: 671 APYRDIQGLEHFDKVIDIDQSPIGRTPR--SNPATYTGVFTPVRELFAGVPESRARGYTP 728 + ++ D++ + R + PA G +R L+A R R Y+P Sbjct: 65 RQFLEMMQKPDVDQIDRLSPGHFDRAEDHLAKPALDVGTSRDLR-LYAPALCPRRRPYSP 123 Query: 729 G 729 Sbjct: 124 A 124 Score = 43.9 bits (102), Expect = 0.034, Method: Compositional matrix adjust. Identities = 26/79 (32%), Positives = 37/79 (46%), Gaps = 16/79 (20%) Query: 761 VPCDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAVPA--------------- 805 PC C G R E L +K I EV +M+I AR++F+ +PA Sbjct: 423 APCPACNGYRLKPEALAVKINRLHIGEVTEMSIRVARDWFETLPASFNAKQNEIAVRILK 482 Query: 806 -LARKLQTLMDVGLTYIRL 823 + +L+ L DVGL Y+ L Sbjct: 483 EIRDRLRFLNDVGLEYLSL 501 >UniRef50_C2HBQ4 Excinuclease subunit A n=4 Tax=Enterococcus faecium RepID=C2HBQ4_ENTFC Length = 743 Score = 414 bits (1063), Expect = e-113, Method: Compositional matrix adjust. Identities = 261/684 (38%), Positives = 377/684 (55%), Gaps = 72/684 (10%) Query: 245 LLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPELSLAG 304 +LFS FA P GY+ +SFN+P G CP C G+G + D + + SL Sbjct: 111 ILFS-RFAEPPLGYA------NAYSFNDPQGMCPVCQGIGKTITLNIDAAV-DVTRSLNE 162 Query: 305 GAIRGWDRRNF----YYFQMLKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKENIEFKY 360 GAI NF +Y++M A+ FD P ++ + +LYG E I Sbjct: 163 GAIL---LPNFTVGTWYWKMY---AETGLFDPNKPISEYTSEEYDRLLYGKA-ERINIPS 215 Query: 361 MNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREE---LAKFISNRPCASCEGTRLRRE 417 D T +EG++ R TE ++ L + C C+G R E Sbjct: 216 AGDMNVT------YEGIVTRFMRTNVHTEKETTKKTAKVLETYTKMDTCPECQGKRFSHE 269 Query: 418 ARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNVGLNY 477 + + + ++ + ++ L + IA I R++ L+++GL Y Sbjct: 270 VLNSKINGYNIYDLTAKELSSLLQILETLDNKERHPLIAS-----IKKRIQDLIDIGLGY 324 Query: 478 LTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDL 537 +TL+R +LSGGE+QR+++ Q+ + L +MY+ DEPS GLH RD L L +RD Sbjct: 325 MTLTRETSSLSGGESQRVKMVKQLASSLTNMMYIFDEPSTGLHPRDVHLLNDLLKKIRDE 384 Query: 538 GNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRK 597 GNTV+VVEHD D I+ ADH++D+GP AG HGGE++ G + ++ +LTG Y+ + Sbjct: 385 GNTVLVVEHDPDVIKVADHIVDVGPYAGSHGGEIMYTGDYDGLLD-SGTLTGNYLRHQLP 443 Query: 598 IEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPI 657 I KK V E + + +NLK++ L +P G+FT ++GV+GSGKSTL+N Sbjct: 444 I---KKEVRTFSETFISRQSSL-HNLKNIRLEIPKGVFTVVSGVAGSGKSTLVNQVF--- 496 Query: 658 AQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAG 717 L+ F + + IDQ+PI RSNPAT++G+ +R+ F Sbjct: 497 ---------------------LKDFPESLLIDQNPIHTNKRSNPATFSGIMNNIRKAFGK 535 Query: 718 VPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLE 777 + A G FS+N +G C C G GVI++ + F+ + V C C GKRY+ L+ Sbjct: 536 ENQVDA-----GYFSYNSKGA-CPECNGMGVIELNLSFMDESEVVCSNCHGKRYDPAVLD 589 Query: 778 IKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQR 837 +Y+GK I EV+DMTIEEA EFFD + RKL+ L +VG+ Y+ LGQ TLSGGEAQR Sbjct: 590 YRYRGKNIVEVMDMTIEEALEFFDE-KEIQRKLENLEEVGIGYLTLGQPMDTLSGGEAQR 648 Query: 838 VKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKT 897 +KLA EL G +YILDEPTTGLH +D++ ++ +++ L D+GNT++VIEHNLDVI++ Sbjct: 649 LKLANELKTNG---QIYILDEPTTGLHMSDVENVIRIINNLVDKGNTVIVIEHNLDVIRS 705 Query: 898 ADWIVDLGPEGGSGGGEILVSGTP 921 ADWI+DLGPEGGSGGG IL G P Sbjct: 706 ADWIIDLGPEGGSGGGNILYEGIP 729 Score = 115 bits (289), Expect = 7e-24, Method: Compositional matrix adjust. Identities = 56/115 (48%), Positives = 79/115 (68%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 63 IE+ AR +NLKNI+L IP++K+ + TG+SGSGKSS+ FDT+ E R+ E+ +++AR Sbjct: 5 IELIHARENNLKNIDLRIPKNKITIFTGVSGSGKSSIVFDTIAQEAGRQLNETFNSFARN 64 Query: 64 FLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEP 118 FL +PD+D I+ LS A+ I QK N RST+GT T+I R+LF+R EP Sbjct: 65 FLPKYSRPDIDEIKHLSTAVLINQKKLGGNARSTLGTATDIQALFRILFSRFAEP 119 Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 54/141 (38%), Positives = 71/141 (50%), Gaps = 8/141 (5%) Query: 613 LKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNG-----ATI 667 ++L AR NNLK++ L +P T TGVSGSGKS+++ DT+ A RQLN A Sbjct: 5 IELIHARENNLKNIDLRIPKNKITIFTGVSGSGKSSIVFDTIAQEAGRQLNETFNSFARN 64 Query: 668 AEPAPYR-DIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESRARGY 726 P R DI ++H + I+Q +G RS T T + R LF+ E GY Sbjct: 65 FLPKYSRPDIDEIKHLSTAVLINQKKLGGNARSTLGTATDIQALFRILFSRFAEP-PLGY 123 Query: 727 TPGRFSFNVRGGRCEACQGDG 747 +SFN G C CQG G Sbjct: 124 ANA-YSFNDPQGMCPVCQGIG 143 >UniRef50_C2ENC0 Excinuclease subunit A n=1 Tax=Lactobacillus ultunensis DSM 16047 RepID=C2ENC0_9LACO Length = 755 Score = 411 bits (1057), Expect = e-113, Method: Compositional matrix adjust. Identities = 251/703 (35%), Positives = 389/703 (55%), Gaps = 74/703 (10%) Query: 246 LFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPELSLAGG 305 L + P G SM +S N+PAG CPTC GLG Q D D + + S+ G Sbjct: 112 LLYSRVGQPSAGGSMS------YSPNHPAGMCPTCTGLGKIQELDEDSLF-DVNKSINEG 164 Query: 306 AI------RGWDRRNFYYFQMLKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKE-NIEF 358 AI GW +++ Y + + + D S +++ YG +E IE Sbjct: 165 AILFEPFSSGW--QSYLY-------STNPQLDPNKKLKDFSEKEWQILKYGDNQEVKIEI 215 Query: 359 KYMNDRGDTSIRRHPFEGVLHNMERRYKETESSAV----REELAKFISNRPCASCEGTRL 414 + N G + R +EGV+ +R Y + + S + R ++ ++ PC++C GT L Sbjct: 216 R-SNKTG--RVDRVDYEGVIPRFKRLYLKRDISKLSKKSRTQVLSHVTTVPCSACAGTGL 272 Query: 415 RREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNVG 474 A + + ++ +S+ + + + K+ RAK + ++I + ++ ++++G Sbjct: 273 NPRALASKINGLNIVDMTALSVDELLPYLD--KIDDPRAK---SLSRQIANTIQHMIDIG 327 Query: 475 LNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHL 534 + YL+L R TLSGGE QR+++ +G+ L V Y+LDEP+ GLH D +++ L++L Sbjct: 328 VGYLSLDRKTNTLSGGEMQRLKIVRNLGSSLNNVTYILDEPTTGLHPADIDKIGKMLLNL 387 Query: 535 RDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSG 594 RD N V+VVEH I AD V+++GP AG GG++V +G L + ++LTG + Sbjct: 388 RDAHNNVLVVEHSRQIINLADEVVEMGPQAGSAGGQIVYQGDLTGLKKA-DTLTGHDLV- 445 Query: 595 KRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTL 654 +KIE+ K+ P + A +NLK V + +P + T +TGV+GSGKS+LI Sbjct: 446 -QKIELNKE--PRKWSDSFHIRDAHCHNLKHVDVDIPKNVLTAVTGVAGSGKSSLIR--- 499 Query: 655 FPIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVREL 714 Y I+ +H + ++ IDQ PIG + RS PATYTGV +R++ Sbjct: 500 ------------------YDFIK--QHPEAIV-IDQKPIGTSIRSTPATYTGVMDEIRKI 538 Query: 715 FAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRE 774 F +A P FSFN +G C C+G GVIK +M F + V C++C+G RY+++ Sbjct: 539 FG-----KANNVAPSWFSFNSKGA-CPICKGRGVIKYDMAFADAVEVICEECQGHRYSQK 592 Query: 775 TLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGE 834 L KY+GK I EV++ TI +A FFD + LQ L+DVGL Y+ LGQ +TLSGGE Sbjct: 593 ALSYKYQGKNIEEVMNFTISDAINFFDN-QKITNALQKLIDVGLGYLTLGQPTSTLSGGE 651 Query: 835 AQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDV 894 QR+K+A EL+K+G +Y++DEP GLH +I+ L +L KL + GNT+++IEH L++ Sbjct: 652 IQRIKIAAELNKKGN---IYVMDEPAAGLHSENIKTLNKLLQKLVNNGNTVIIIEHRLEL 708 Query: 895 IKTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLK 937 I ADWI+D+GPEGGS GG++ +GTP+ + S T +LK Sbjct: 709 ISKADWIIDIGPEGGSKGGKVCFTGTPQELCHDTNSKTGIYLK 751 Score = 121 bits (303), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 58/117 (49%), Positives = 85/117 (72%) Query: 2 DKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYA 61 DKIE+ A +NLK+I+L IP++KL+V G+SGSGKSSL FDT+ E R + S S Y Sbjct: 4 DKIEIIKANENNLKDISLSIPKNKLVVFAGVSGSGKSSLVFDTIATESSREWQNSYSLYL 63 Query: 62 RQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEP 118 R + ++PDV+ I+ L+PAI ++Q+++S + RSTVGTI ++ LRLL++RVG+P Sbjct: 64 RNKMPHYQRPDVESIKNLTPAIVVKQQASSGSSRSTVGTIVDVAPLLRLLYSRVGQP 120 Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 41/144 (28%), Positives = 69/144 (47%), Gaps = 8/144 (5%) Query: 613 LKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGA---TIAE 669 +++ A NNLKD++L++P GVSGSGKS+L+ DT+ + R+ + + Sbjct: 6 IEIIKANENNLKDISLSIPKNKLVVFAGVSGSGKSSLVFDTIATESSREWQNSYSLYLRN 65 Query: 670 PAPYR---DIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESRARGY 726 P+ D++ +++ I + Q + RS T V +R L++ V + A G Sbjct: 66 KMPHYQRPDVESIKNLTPAIVVKQQASSGSSRSTVGTIVDVAPLLRLLYSRVGQPSAGGS 125 Query: 727 TPGRFSFNVRGGRCEACQGDGVIK 750 +S N G C C G G I+ Sbjct: 126 M--SYSPNHPAGMCPTCTGLGKIQ 147 Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 37/113 (32%), Positives = 53/113 (46%), Gaps = 30/113 (26%) Query: 2 DKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYA 61 D +R A HNLK++++ IP++ L VTG++GSGKSSL RY Sbjct: 459 DSFHIRDAHCHNLKHVDVDIPKNVLTAVTGVAGSGKSSLI----------RY-------- 500 Query: 62 RQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFAR 114 D I+ AI I+QK + RST T T + D +R +F + Sbjct: 501 ------------DFIKQHPEAIVIDQKPIGTSIRSTPATYTGVMDEIRKIFGK 541 >UniRef50_B1VG20 Excinuclease ABC, subunit A n=2 Tax=Actinomycetales RepID=B1VG20_CORU7 Length = 863 Score = 411 bits (1057), Expect = e-113, Method: Compositional matrix adjust. Identities = 251/720 (34%), Positives = 378/720 (52%), Gaps = 45/720 (6%) Query: 245 LLFSANFACPICGYSMRE------LEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNP 298 LLFS + + P MRE L+ FS N AG CP C G G + ++ +P Sbjct: 129 LLFSRSGSYP---NGMRERLEYGRLDSDAFSPNTTAGMCPECQGTGTVHRPTEESMVPDP 185 Query: 299 ELSLAGGAIRGWDRRNFYYFQMLKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKENIEF 358 LS+ GAI W + + + + + ++ PW + +L+ + + Sbjct: 186 SLSIWDGAIAAWP--GAWLGKNFRDILGTLGYPLDIPWRDIPQTDRDWILFTDEQPVVTV 243 Query: 359 KYMNDRGDTS-IRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGTRLRRE 417 + D + + + V + ETES R + F+ + C +C+G + + Sbjct: 244 HPVRDENAVNGSYKGKWRSVATYLTDTLAETESDKNRRRVLSFMHSSTCPTCQGRGFQPD 303 Query: 418 ARHVYVENTPLPAISDMSIGHAMEFFNN--LKLAG-------QRAKIAEKILKEIGDRLK 468 V + +D+++ + LAG + + E +L ++ ++ Sbjct: 304 TLQVTYAGYAIDEFNDLALKDVLAVLEERLQYLAGIAKQQWTEHDEAEELLLDQVLPTVR 363 Query: 469 FLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLL 528 + +GL +L+LSR A +LS GE QR+RLASQ+ + L G YVLDEPS GLH + + + Sbjct: 364 AAIKLGLGHLSLSRPARSLSAGEHQRLRLASQLNSSLFGTTYVLDEPSAGLHVVERKAVS 423 Query: 529 GTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLT 588 L GN+V++VEHD + D ++DIGP AG GG++V GP + A E L Sbjct: 424 ELLQRFITAGNSVLLVEHDMSLVAGCDWIVDIGPRAGERGGQLVFSGPTDQFRATAEQL- 482 Query: 589 GQYMSGKRKIEVPK-KRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKS 647 G + + P+ PA + + L+G + P+G T +TGVSGSGKS Sbjct: 483 GSPTAAALTEDFPELAASPAGTGQSIHLSGIHARAFDGADVDFPLGALTAVTGVSGSGKS 542 Query: 648 TLINDTLFPIAQR---QLNGAT-IAEPAPYRDIQ---------------GLEHFDKVIDI 688 TL+ L + R Q+ GA +++ P ++ G++ +++ I Sbjct: 543 TLVIGVLADVVSRSAKQVIGADEVSDEDPDAELTAGSGANGDFRVESATGVDKIRRLVHI 602 Query: 689 DQSPIGRTPRSNPATYTGVFTPVRELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGV 748 Q PIGRT RS ATYTG+F VR LFA PE++ RG + FS+N GRC C G G Sbjct: 603 TQKPIGRTVRSTVATYTGLFDHVRRLFAATPEAKQRGMSVSDFSYNTTKGRCPECDGAGS 662 Query: 749 IKVEMHFLPDIYVPCDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALAR 808 I+VE+ FLP Y C C GKRY E LEI++ G++I ++L +T++EA E F P + R Sbjct: 663 IEVELVFLPGTYTTCPACHGKRYKPEILEIEWNGRSIADILALTVDEALEVFAEEPRILR 722 Query: 809 KLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTG--QTLYILDEPTTGLHFA 866 ++ L +GL Y+RLGQ + LSGGEAQR+KLA E+ +RG+G +LY+LDEPTTGLH A Sbjct: 723 SVEFLHALGLGYLRLGQGSPELSGGEAQRIKLASEM-QRGSGHKHSLYLLDEPTTGLHPA 781 Query: 867 DIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAE 926 D+ LL L +L D G T+VV+EH+L V+ AD ++D+GP G GG+IL +GTP VA+ Sbjct: 782 DVDLLLAQLRRLVDDGATVVVVEHDLRVVAQADHVIDVGPGAGDEGGQILATGTPAAVAQ 841 Score = 118 bits (296), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 56/113 (49%), Positives = 81/113 (71%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 63 I VR A HNLK+I++ +PRD L+ VTG+SGSGKSSLAF T++ E QRRY+ES+S +AR+ Sbjct: 23 IRVRDAHLHNLKHIDVDLPRDTLVAVTGVSGSGKSSLAFGTIHGEAQRRYLESVSPFARR 82 Query: 64 FLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVG 116 + P V + GL P ++++Q +T RS+VGTI+ + + +RLLF+R G Sbjct: 83 LIGGAVNPRVGSVTGLPPTVALQQSTTLGGARSSVGTISNMSNSIRLLFSRSG 135 Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 51/181 (28%), Positives = 74/181 (40%), Gaps = 35/181 (19%) Query: 606 PANPEK-----VLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQR 660 P PE+ ++++ A +NLK + + LP +TGVSGSGKS+L T+ AQR Sbjct: 11 PHTPERAGHDPMIRVRDAHLHNLKHIDVDLPRDTLVAVTGVSGSGKSSLAFGTIHGEAQR 70 Query: 661 QLNGATIAEPAPYRDIQG--------LEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVR 712 + + P R I G + + + QS RS+ T + + +R Sbjct: 71 RYLESV--SPFARRLIGGAVNPRVGSVTGLPPTVALQQSTTLGGARSSVGTISNMSNSIR 128 Query: 713 ELFAGVPESRARGYTPG-------------RFSFNVRGGRCEACQGDGVIK--VEMHFLP 757 LF SR+ Y G FS N G C CQG G + E +P Sbjct: 129 LLF-----SRSGSYPNGMRERLEYGRLDSDAFSPNTTAGMCPECQGTGTVHRPTEESMVP 183 Query: 758 D 758 D Sbjct: 184 D 184 >UniRef50_Q039P8 Excinuclease ATPase subunit n=56 Tax=Bacteria RepID=Q039P8_LACC3 Length = 760 Score = 410 bits (1054), Expect = e-112, Method: Compositional matrix adjust. Identities = 244/701 (34%), Positives = 375/701 (53%), Gaps = 75/701 (10%) Query: 245 LLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLG------VQQYFDPDRVIQNP 298 LLFS P GYS FSFN P G C TC GLG V++ DP++ + Sbjct: 113 LLFS-RAGKPFIGYS------DTFSFNLPQGMCKTCQGLGYVDDIDVKKLIDPNKSLNQG 165 Query: 299 ELSLAGGAIRGWDRRNFYYFQMLKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKENIEF 358 ++ W + + Y + FD + G + +LY Sbjct: 166 AITFVSFGPDTWRWKRYAYSGL---------FDNDKRLGDYTKQEMDTLLYAP------- 209 Query: 359 KYMNDRGDTSIRRHP-FEGVLHNMERRY-KETESSAVREELAKFISNRPCASCEGTRLRR 416 + D T + +EGV+ + R + E+ + LA+ ++ PC +C GTRLR Sbjct: 210 QQTLDHAPTKWPKTALYEGVVPRIRRSIIGKKEAEHHKTALAEIVTRMPCPTCHGTRLRP 269 Query: 417 EARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNVGLN 476 E + T + + M + F N G + + + +++E+ ++ L+++GL Sbjct: 270 EVLTCLINQTNIAQVLQMDLVKVRHFLN-----GIQEPLVQDVIRELLRKIDSLIDIGLG 324 Query: 477 YLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRD 536 YL+L R ETLSGGE QRI++A + + LV ++Y+LDEPS+GLH D E + ++ L++ Sbjct: 325 YLSLDRPTETLSGGETQRIKIAKFLTSALVDMVYILDEPSVGLHPHDIELIKRAILRLKE 384 Query: 537 LGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKR 596 GNT+++VEH+ I D+++++GPGAG GG + G +A++ ++LTG+ + Sbjct: 385 KGNTILIVEHNPALIAIGDNIVEVGPGAGTTGGHITFTGTYQALLD-SDTLTGKLLKQPL 443 Query: 597 KIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFP 656 P+ PA + L +NLKDV++ +P+G+ T I+GV+GSGKSTL++ Sbjct: 444 TFRQPR---PAT--STISLQHIHRHNLKDVSVAVPLGIETVISGVAGSGKSTLVS----- 493 Query: 657 IAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFA 716 + QL APY ID+ Q+ IG RS PATY + P+R++FA Sbjct: 494 ALRDQLT-------APY------------IDLAQADIGANIRSAPATYLSILDPIRKVFA 534 Query: 717 GVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETL 776 A FS+N RG C C+G GV M F+ + C+QC G+RYN + L Sbjct: 535 D-----ANHVASSWFSYNGRGA-CPRCKGKGVTITNMAFMDPVVQTCEQCHGRRYNDQAL 588 Query: 777 EIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQ 836 Y K I +VL M I +A+ FF VPA+A L+ + VGL Y+ LGQ TTLSGGE Q Sbjct: 589 SYTYHDKNISDVLRMPITKAQNFFTDVPAIAAPLRNMARVGLDYLTLGQPLTTLSGGEKQ 648 Query: 837 RVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIK 896 R+KLA EL++ G TLY+LDEPT GLH D+++L+ + +L GN+++++EHNL+VI Sbjct: 649 RLKLAVELNRTG---TLYLLDEPTAGLHLQDVKKLIQLFDELVADGNSLIIVEHNLEVIS 705 Query: 897 TADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLK 937 ADW++D+GP+ G GG++ +GTPE + S T + +K Sbjct: 706 QADWLIDMGPDAGIYGGQVRYTGTPENSMTVKQSRTGQAMK 746 Score = 106 bits (265), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 54/115 (46%), Positives = 75/115 (65%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 63 IEV A +NL+++N+ IP+D + V G SGSGKSSL FDT+ AE +R E+ ++ +Q Sbjct: 7 IEVHDANQNNLQHVNVKIPKDAISVFVGRSGSGKSSLVFDTIAAESRRELNETFPSFTQQ 66 Query: 64 FLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEP 118 +L +PDV I+ L AI +EQK N RST+ T T I+ LRLLF+R G+P Sbjct: 67 YLPKYGQPDVGQIDHLPVAIVVEQKRIGKNARSTLATYTGIYSLLRLLFSRAGKP 121 Score = 79.0 bits (193), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 51/140 (36%), Positives = 76/140 (54%), Gaps = 12/140 (8%) Query: 618 ARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAEPAPYR--- 674 A NNL+ V + +P + G SGSGKS+L+ DT+ ++R+LN + Y Sbjct: 12 ANQNNLQHVNVKIPKDAISVFVGRSGSGKSSLVFDTIAAESRRELNETFPSFTQQYLPKY 71 Query: 675 ---DIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELF--AGVPESRARGYTPG 729 D+ ++H I ++Q IG+ RS ATYTG+++ +R LF AG P GY+ Sbjct: 72 GQPDVGQIDHLPVAIVVEQKRIGKNARSTLATYTGIYSLLRLLFSRAGKP---FIGYS-D 127 Query: 730 RFSFNVRGGRCEACQGDGVI 749 FSFN+ G C+ CQG G + Sbjct: 128 TFSFNLPQGMCKTCQGLGYV 147 >UniRef50_C1B8F2 UvrA-like protein n=57 Tax=Bacteria RepID=C1B8F2_RHOOB Length = 806 Score = 408 bits (1049), Expect = e-112, Method: Compositional matrix adjust. Identities = 250/682 (36%), Positives = 364/682 (53%), Gaps = 77/682 (11%) Query: 269 SFNNPAGACPTCDGLG------VQQYFDPDRVIQNPELSLAGGAIRGWDRRNFYYFQMLK 322 SF+ G CP C+G G + +D + + L++ G ++ GW R + Sbjct: 182 SFSLTGGMCPRCEGRGSVTDFDLTALYDDSKSLNEGALTIPGYSMEGWYGRIYRGCGF-- 239 Query: 323 SLADHYKFDVEAPWGSLSANVHKVVLYGSGKENIEFKYMNDRGDTSIRRHPFEGVLHNME 382 FD + P + + +LY KE + K FEG++ ++ Sbjct: 240 -------FDPDKPIAKFTKKQLQDLLY---KEPTKIKVEG-------VNITFEGLIPKIQ 282 Query: 383 RRYKETESSAVREELAKF----ISNRPCASCEGTRLRREARHVYVENTPLPAISDMSIGH 438 + + + A++ + F I+ C CEGTRL AR ++ + + M I Sbjct: 283 KSFLAKDVDAMQPHIRAFVERAITFATCPDCEGTRLSEGARSSKIKGKNIADVCSMQISD 342 Query: 439 AMEFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLA 498 ++ LK +A +L + L +GL YL+L R + TLSGGEAQR ++ Sbjct: 343 LADWVRGLK----EPSVA-PLLTGLQHLLDSFTEIGLGYLSLDRPSGTLSGGEAQRTKMI 397 Query: 499 SQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVI 558 +G+ L V YV DEP+IGLH D +R+ G L+ LRD GNTV+VVEH +AI ADHV+ Sbjct: 398 RHLGSSLTDVTYVFDEPTIGLHPHDIQRMNGLLLQLRDKGNTVLVVEHKPEAIAIADHVV 457 Query: 559 DIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEVPKKRVPANPEKVLKLTGA 618 D+GP AG GGEVV EG +E + A ++LTG+++ + ++ + L++ GA Sbjct: 458 DLGPRAGTEGGEVVFEGTVEGLRA-SDTLTGRHLDDRATLKSSVR----ESSGALEVRGA 512 Query: 619 RGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAEPAPYRDIQG 678 +NL V + +P+G+ +TGV+GSGKS+LI+ + +A R Sbjct: 513 DTHNLCGVDVDIPLGMLVVVTGVAGSGKSSLIHGS---VADR------------------ 551 Query: 679 LEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESRARGYTPGRFSFNVRGG 738 D V+ IDQ I + RSNPATYTG+ P+R+ FA +A G P FS N G Sbjct: 552 ----DGVVAIDQGAIKGSRRSNPATYTGLLEPIRKAFA-----KANGVKPALFSSNSEGA 602 Query: 739 RCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEARE 798 C C G GVI ++ + + PC++C+GKR+ E LE K G+ I EVL M + EA E Sbjct: 603 -CPTCNGAGVIYTDLGVMATVESPCEECEGKRFQAEVLEFKLGGRNIAEVLAMPVAEAEE 661 Query: 799 FFDA----VPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLY 854 FF A +PA + LQ L DVGL Y+ LGQ TTLSGGE QR+KLA ++ +G +Y Sbjct: 662 FFGAGEARIPAAHKILQRLADVGLGYLSLGQPLTTLSGGERQRLKLATAMADKGE---IY 718 Query: 855 ILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGE 914 +LDEPTTGLH AD++QLL +L +L D G +++VIEH+ V+ ADWI+DLGP G GG Sbjct: 719 VLDEPTTGLHLADVEQLLGLLDRLVDSGKSVIVIEHHQAVMAHADWIIDLGPGAGHDGGR 778 Query: 915 ILVSGTPETVAECEASHTARFL 936 I+ G PE + ++ T L Sbjct: 779 IVFEGRPEDLVADASTLTGEHL 800 Score = 130 bits (326), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 79/190 (41%), Positives = 110/190 (57%), Gaps = 14/190 (7%) Query: 405 PCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQ-RAKIAEKILKEI 463 PC CEG R + E + + + M + A EFF AG+ R A KIL+ + Sbjct: 625 PCEECEGKRFQAEVLEFKLGGRNIAEVLAMPVAEAEEFFG----AGEARIPAAHKILQRL 680 Query: 464 GDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRD 523 D VGL YL+L + TLSGGE QR++LA+ + G +YVLDEP+ GLH D Sbjct: 681 AD-------VGLGYLSLGQPLTTLSGGERQRLKLATAMADK--GEIYVLDEPTTGLHLAD 731 Query: 524 NERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAV 583 E+LLG L L D G +VIV+EH + + AD +ID+GPGAG GG +V EG E ++A Sbjct: 732 VEQLLGLLDRLVDSGKSVIVIEHHQAVMAHADWIIDLGPGAGHDGGRIVFEGRPEDLVAD 791 Query: 584 PESLTGQYMS 593 +LTG++++ Sbjct: 792 ASTLTGEHLA 801 Score = 120 bits (300), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 58/117 (49%), Positives = 85/117 (72%) Query: 2 DKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYA 61 D I V GAR +NLK+I++ +P+ +L V TG+SGSGKSSL F T+ AE QR E+ SA+ Sbjct: 31 DLIRVHGARENNLKDISVELPKRRLTVFTGVSGSGKSSLVFATIAAESQRMINETYSAFV 90 Query: 62 RQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEP 118 + F+ + +PDVD ++GL+ AI ++Q+ NPRSTVGT T+ + LR+LF+R+G+P Sbjct: 91 QGFMPTLARPDVDVLDGLTTAIIVDQERMGSNPRSTVGTATDANAMLRILFSRLGKP 147 Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 55/177 (31%), Positives = 81/177 (45%), Gaps = 38/177 (21%) Query: 607 ANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGA- 665 A+ ++++ GAR NNLKD+++ LP T TGVSGSGKS+L+ T+ +QR +N Sbjct: 27 ADSHDLIRVHGARENNLKDISVELPKRRLTVFTGVSGSGKSSLVFATIAAESQRMINETY 86 Query: 666 ---------TIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFA 716 T+A P D+ L+ I +DQ +G PRS T T +R LF+ Sbjct: 87 SAFVQGFMPTLARP----DVDVLDGLTTAIIVDQERMGSNPRSTVGTATDANAMLRILFS 142 Query: 717 -------GVPES-----------------RARGYTPGRFSFNVRGGRCEACQGDGVI 749 G P++ R R SF++ GG C C+G G + Sbjct: 143 RLGKPHIGSPQAFSFNVASISGAGAVTIERGGQQIKERRSFSLTGGMCPRCEGRGSV 199 Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust. Identities = 23/37 (62%), Positives = 30/37 (81%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSL 40 +EVRGA THNL +++ IP L+VVTG++GSGKSSL Sbjct: 507 LEVRGADTHNLCGVDVDIPLGMLVVVTGVAGSGKSSL 543 >UniRef50_D1AQT8 ABC transporter related protein n=1 Tax=Sebaldella termitidis ATCC 33386 RepID=D1AQT8_SEBTE Length = 752 Score = 400 bits (1028), Expect = e-109, Method: Compositional matrix adjust. Identities = 248/715 (34%), Positives = 387/715 (54%), Gaps = 67/715 (9%) Query: 232 AVVADMDDPKAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDP 291 + V + D A L + A P GYSM +SFN+P G CP C GLGV + + Sbjct: 96 STVGTITDIYASLRLLFSRIAKPFIGYSMN------YSFNSPEGMCPKCKGLGVIKEINI 149 Query: 292 DRVIQNPELSLAGGAIRGWDRRNFYYFQM----LKSLADHYKFDVEAPWGSLSANVHKVV 347 +I N E SL GA++ F FQ L + FD + ++N ++ Sbjct: 150 KSLI-NFEKSLNSGAVQ------FPTFQSGGWRLTRYTESGNFDNDKKIKEYTSNELSML 202 Query: 348 LYGSGKENIEFKYMNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCA 407 LY +G K + R + G++ + + + ET+++ +++L + + R C Sbjct: 203 LYNTGSSP---KSPTKNWHKTAR---YVGLIPRITKAFIETDNTKYKKDLERILEIRICT 256 Query: 408 SCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDRL 467 C GTR+ ++ R + N + +S+ F + +K E IL ++ +L Sbjct: 257 ECSGTRVNKKVRSAKILNNSISDCVSLSLDELRIFLDKIK-----EPEVEIILMDLKTKL 311 Query: 468 KFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERL 527 + L ++GL+YLTL+R+ TLSGGE+QRI++A + + L ++Y+ DE S GLH D + Sbjct: 312 ESLQSLGLSYLTLNRATTTLSGGESQRIKIAKHLNSSLSDILYIFDELSTGLHPEDLTGI 371 Query: 528 LGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESL 587 + L L+ GNT+I+V+HD D I+ ADH+I++G GAGV+GG V +G E ++A ++L Sbjct: 372 IKILYKLKQKGNTIILVDHDPDIIKIADHIINLGEGAGVNGGCVTYQGTYEGLLA-SDTL 430 Query: 588 TGQYMSGKRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKS 647 T + ++ + K+ N ++ +L NN+K++++ +P FT +TGV+GSGKS Sbjct: 431 TSKALNTSHLLNNKKR----NFQEFYELQNVSLNNIKNISIKIPKNAFTVVTGVAGSGKS 486 Query: 648 TLINDTLFPIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGV 707 +LI LF F + +DQSP+ + RSN +Y GV Sbjct: 487 SLIRH-LFK-----------------------NKFSDAMILDQSPVHSSSRSNILSYLGV 522 Query: 708 FTPVRELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCK 767 F ++ LF+ V FS+N +G C C+G G IK+++ FL D C+ C+ Sbjct: 523 FDTIKTLFSKVSSKNI-----SHFSYNGKGA-CPVCKGKGYIKLDLAFLGDTKQLCEGCR 576 Query: 768 GKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAVPA--LARKLQTLMDVGLTYIRLGQ 825 GKR+N ETL YK K I +VL++T++EA FFD + L+R L L L Y++LGQ Sbjct: 577 GKRFNNETLSYYYKNKNIDDVLNLTVKEAESFFDDTNSEKLSRMLSCLTMANLDYLKLGQ 636 Query: 826 SATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTI 885 S T SGGE QR+K+A+ L ++ + L ILDEP+TGLH +D+Q LL++ L GNT+ Sbjct: 637 SLDTFSGGELQRLKIAKTLFEKNS--KLLILDEPSTGLHESDVQNLLELFFVLVKNGNTL 694 Query: 886 VVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLKPML 940 +V+EHNL +I A+WI+DLG GG GG+I+ G P + + S TA+ LK L Sbjct: 695 IVLEHNLSIISQAEWIIDLGLYGGVLGGKIIFQGYPGDIIDHPVSLTAKHLKKFL 749 Score = 129 bits (324), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 64/118 (54%), Positives = 85/118 (72%) Query: 1 MDKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAY 60 MD I++ ART+NLKNI+L IP+ K+IVVTG+SGSGKSSL FDT+ ++ QR E+ S+Y Sbjct: 1 MDNIQIINARTNNLKNISLEIPKRKIIVVTGISGSGKSSLVFDTIASQSQRLLSETFSSY 60 Query: 61 ARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEP 118 +Q L E+P VD I L +I I Q + N RSTVGTIT+I+ LRLLF+R+ +P Sbjct: 61 IQQLLPHYEQPKVDRISNLPVSIIINQNKITGNARSTVGTITDIYASLRLLFSRIAKP 118 Score = 90.5 bits (223), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 63/194 (32%), Positives = 102/194 (52%), Gaps = 13/194 (6%) Query: 406 CASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGD 465 C C G R E Y +N + + ++++ A FF++ +EK+ + Sbjct: 572 CEGCRGKRFNNETLSYYYKNKNIDDVLNLTVKEAESFFDDTN--------SEKLSR---- 619 Query: 466 RLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNE 525 L L L+YL L +S +T SGGE QR+++A + ++ +LDEPS GLH+ D + Sbjct: 620 MLSCLTMANLDYLKLGQSLDTFSGGELQRLKIAKTLFEKNSKLL-ILDEPSTGLHESDVQ 678 Query: 526 RLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPE 585 LL L GNT+IV+EH+ I A+ +ID+G GV GG+++ +G I+ P Sbjct: 679 NLLELFFVLVKNGNTLIVLEHNLSIISQAEWIIDLGLYGGVLGGKIIFQGYPGDIIDHPV 738 Query: 586 SLTGQYMSGKRKIE 599 SLT +++ KI+ Sbjct: 739 SLTAKHLKKFLKIK 752 Score = 76.3 bits (186), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 48/144 (33%), Positives = 80/144 (55%), Gaps = 8/144 (5%) Query: 613 LKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLN---GATIAE 669 +++ AR NNLK+++L +P +TG+SGSGKS+L+ DT+ +QR L+ + I + Sbjct: 4 IQIINARTNNLKNISLEIPKRKIIVVTGISGSGKSSLVFDTIASQSQRLLSETFSSYIQQ 63 Query: 670 PAPYRD---IQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESRARGY 726 P+ + + + + I I+Q+ I RS T T ++ +R LF+ + + GY Sbjct: 64 LLPHYEQPKVDRISNLPVSIIINQNKITGNARSTVGTITDIYASLRLLFSRIAKPFI-GY 122 Query: 727 TPGRFSFNVRGGRCEACQGDGVIK 750 + +SFN G C C+G GVIK Sbjct: 123 SMN-YSFNSPEGMCPKCKGLGVIK 145 >UniRef50_C0VYB5 Excinuclease subunit A n=1 Tax=Actinomyces coleocanis DSM 15436 RepID=C0VYB5_9ACTO Length = 833 Score = 399 bits (1026), Expect = e-109, Method: Compositional matrix adjust. Identities = 260/699 (37%), Positives = 379/699 (54%), Gaps = 97/699 (13%) Query: 264 EPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPELSLAGGAIR-------GWDRRNFY 316 E R + N G C C+GLGV D +V N ELSL GAI GW R + Sbjct: 167 EKRTYEVN--GGMCADCEGLGVVNDIDLTKVF-NVELSLNDGAITVPGYTADGWAVRLYS 223 Query: 317 YFQMLKSLADHYKFDVEAPWGSLSANVHKVVLYGSG-KENIEFKYMNDRGDTSIRRHPFE 375 A + F + P + +A + LYG K IE M +E Sbjct: 224 --------ASGF-FPADQPIKTFTAEQLQTFLYGEPVKVKIESINMT-----------YE 263 Query: 376 GVLHNMERRYKETESSAVREELAKFISNR----PCASCEGTRLRREARHVYVENTPLPAI 431 G++ +++ + ++ + KF+ PC +CEGTRL AR V V + Sbjct: 264 GLIPKLQKSMFSKDIEGLQPHIRKFVETAVTFAPCPACEGTRLNPAARAVTVAGLNIAQA 323 Query: 432 SDMSIGHAMEFFNNLKLAGQRAKIAEK---------ILKEIGDRLKFLVNVGLNYLTLSR 482 + I + + L LAG+ A A + +L + ++L V +GL YL+L+R Sbjct: 324 HVLEITDLLAWVQQL-LAGEIALAAAEAPLISEGGLLLTNLAEQLSSFVEIGLGYLSLAR 382 Query: 483 SAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVI 542 SA +LSGGEAQR+++ + + L + YV DEP+ GLH D ER+ L+ LRD GNTV+ Sbjct: 383 SASSLSGGEAQRVKMIRHLRSALTDMTYVFDEPTAGLHPHDIERMKRVLLQLRDAGNTVL 442 Query: 543 VVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMS----GKRKI 598 V+EH + I ADH+ID+GPGAG HGGE++ G ++AV ++ T S RK Sbjct: 443 VIEHRPEVIEIADHIIDMGPGAGKHGGEIMFAGTFSELLAVSDAKTSLGTSLPNGNPRKA 502 Query: 599 EVPKKRVPAN----PEKV----------LKLTGARGNNLKDVTLTLPVGLFTCITGVSGS 644 + + V + P +V ++L G NNL+ + + +P+G+ T +TGV+GS Sbjct: 503 DSAQTSVTSQVLSLPLQVKTSARTFSEKIELRGVTANNLRGIDVDVPLGVLTAVTGVAGS 562 Query: 645 GKSTLINDTLFPIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATY 704 GKSTLI GA ++ A +I I +DQ I + RSNPATY Sbjct: 563 GKSTLI-------------GALVSSGAAPSEI---------IMVDQGAIKGSRRSNPATY 600 Query: 705 TGVFTPVRELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCD 764 TGVF P+R+ FA +A G P FS N G CE C+G GVI ++ F+ + C+ Sbjct: 601 TGVFDPIRKAFA-----KASGQKPALFSANSEGA-CETCKGAGVIYTDLGFMQTVENHCE 654 Query: 765 QCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAV---PALARKLQTLMDVGLTYI 821 C G+R++ L+ +GK+I +VL+M +EA EFF PA+++ LQ L+DVGL Y+ Sbjct: 655 SCDGRRFDESVLQYHLEGKSIADVLEMPAQEALEFFTKEAKNPAVSKVLQRLVDVGLEYL 714 Query: 822 RLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQ 881 LGQS TTLSGGE QR+KLA +++ +G +Y+LDEP+TGLH AD ++LL +L +L D Sbjct: 715 SLGQSLTTLSGGERQRLKLASQMADKG---GIYVLDEPSTGLHLADTRKLLALLDQLVDS 771 Query: 882 GNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGT 920 G T++V+EHNL V+ ADW++DLGP G GG+++ +GT Sbjct: 772 GKTVIVVEHNLHVVAHADWVIDLGPGAGHEGGQVVYAGT 810 Score = 128 bits (322), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 79/191 (41%), Positives = 104/191 (54%), Gaps = 17/191 (8%) Query: 406 CASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGD 465 C SC+G R ++E + + +M A+EFF E + Sbjct: 653 CESCDGRRFDESVLQYHLEGKSIADVLEMPAQEALEFFTK-----------EAKNPAVSK 701 Query: 466 RLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNE 525 L+ LV+VGL YL+L +S TLSGGE QR++LASQ+ G +YVLDEPS GLH D Sbjct: 702 VLQRLVDVGLEYLSLGQSLTTLSGGERQRLKLASQMADK--GGIYVLDEPSTGLHLADTR 759 Query: 526 RLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMA--- 582 +LL L L D G TVIVVEH+ + AD VID+GPGAG GG+VV G + + A Sbjct: 760 KLLALLDQLVDSGKTVIVVEHNLHVVAHADWVIDLGPGAGHEGGQVVYAGTVSQMHADKN 819 Query: 583 -VPESLTGQYM 592 +S T QY+ Sbjct: 820 LADQSKTAQYI 830 Score = 112 bits (281), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 55/115 (47%), Positives = 78/115 (67%) Query: 2 DKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYA 61 D I V GA+ +NLKN+ + IP+ KL V TG+SGSGKSSL FDT+ E QR E+ A+ Sbjct: 9 DFIHVIGAQENNLKNLEVQIPKRKLTVFTGVSGSGKSSLVFDTIATESQRLINETYPAFI 68 Query: 62 RQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVG 116 + F+ + +P VD + GL+PAI + Q+ N RSTVGT+T++ LRL++A+ G Sbjct: 69 QGFMGNLNRPHVDDLRGLTPAIVVSQEKLGANARSTVGTVTDVSTLLRLIWAKFG 123 Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 53/177 (29%), Positives = 77/177 (43%), Gaps = 40/177 (22%) Query: 613 LKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAEPAP 672 + + GA+ NNLK++ + +P T TGVSGSGKS+L+ DT+ +QR +N A Sbjct: 11 IHVIGAQENNLKNLEVQIPKRKLTVFTGVSGSGKSSLVFDTIATESQRLINETYPAFIQG 70 Query: 673 YRDIQGLEHFDKV------IDIDQSPIGRTPRSNPATYTGVFTPVRELFA--GV---PES 721 + H D + I + Q +G RS T T V T +R ++A GV + Sbjct: 71 FMGNLNRPHVDDLRGLTPAIVVSQEKLGANARSTVGTVTDVSTLLRLIWAKFGVVAENNT 130 Query: 722 RARGY---TPGRFSFN--------------------------VRGGRCEACQGDGVI 749 + R +P FSFN V GG C C+G GV+ Sbjct: 131 KVRALKMSSPNAFSFNVPNVKASGAIKVEKGKDTKTEKRTYEVNGGMCADCEGLGVV 187 >UniRef50_UPI00004C267E COG0178: Excinuclease ATPase subunit n=1 Tax=Streptococcus pyogenes M49 591 RepID=UPI00004C267E Length = 435 Score = 397 bits (1020), Expect = e-108, Method: Compositional matrix adjust. Identities = 211/437 (48%), Positives = 289/437 (66%), Gaps = 8/437 (1%) Query: 219 ESFETALELSGGTAVVADMDDPKAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACP 278 +S E AL L G ++ MD ELLFS +++CP+CG+++ ELEPRLFSFN P G+CP Sbjct: 1 DSVEAALRLGDGYLMIDTMD---GNELLFSEHYSCPVCGFTVPELEPRLFSFNAPFGSCP 57 Query: 279 TCDGLGVQQYFDPDRVIQNPELSLAGGAIRGWDR-RNFYYFQMLKSLADHYKFDVEAPWG 337 TCDGLG++ D D V+ +P SL GA+ W+ + YY ML+ + D++ P+ Sbjct: 58 TCDGLGIKLEVDLDLVVPDPSKSLKEGALAPWNPISSNYYPTMLEQAMASFGVDMDTPFE 117 Query: 338 SLSANVHKVVLYGSGKENIEFKYMNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREEL 397 +L+ +VLYGSG F Y+ND G PFEGV+ N+ RRY ET S R + Sbjct: 118 ALTEEERDLVLYGSGDREFHFHYVNDFGGERNIDIPFEGVVTNVNRRYHETNSDYTRNVM 177 Query: 398 AKFISNRPCASCEGTRLRREARHVYV---ENTPLPAISDMSIGHAMEFFNNLKLAGQRAK 454 +++ CA+C G RL +A V+V E + IS++SI ++ L+L + Sbjct: 178 RGYMNELTCATCHGYRLNDQALCVHVGGEEGPHIGQISELSIADHLQLLEELELTENEST 237 Query: 455 IAEKILKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDE 514 IA+ I+KEI DRL FL NVGLNYLTLSR+A TLSGGE+QRIRLA+QIG+ L GV+Y+LDE Sbjct: 238 IAKPIVKEIHDRLTFLNNVGLNYLTLSRAAGTLSGGESQRIRLATQIGSNLSGVLYILDE 297 Query: 515 PSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAE 574 PSIGLHQRDN+RL+ +L +RDLGNT+IVVEHDED + AD +ID+GPGAG GGE++A Sbjct: 298 PSIGLHQRDNDRLIESLKKMRDLGNTLIVVEHDEDTMMQADWLIDVGPGAGEFGGEIIAS 357 Query: 575 GPLEAIMAVPESLTGQYMSGKRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGL 634 G + + +S+TGQY+SGK+ I VP +R N + +++ GA NNL+ + + P+G Sbjct: 358 GTPKQVAKNKKSITGQYLSGKKFIPVPLERRSGN-GRFIEIKGASQNNLQSLDVRFPLGK 416 Query: 635 FTCITGVSGSGKSTLIN 651 F +TGVSGSGKS L+N Sbjct: 417 FIAVTGVSGSGKSALVN 433 Score = 130 bits (328), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 72/192 (37%), Positives = 114/192 (59%), Gaps = 18/192 (9%) Query: 763 CDQCKGKRYNRETLEIKYKGKT---IHEVLDMTIEEAREFFDA--------------VPA 805 C C G R N + L + G+ I ++ +++I + + + V Sbjct: 186 CATCHGYRLNDQALCVHVGGEEGPHIGQISELSIADHLQLLEELELTENESTIAKPIVKE 245 Query: 806 LARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHF 865 + +L L +VGL Y+ L ++A TLSGGE+QR++LA ++ +G LYILDEP+ GLH Sbjct: 246 IHDRLTFLNNVGLNYLTLSRAAGTLSGGESQRIRLATQIGSNLSG-VLYILDEPSIGLHQ 304 Query: 866 ADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVA 925 D +L++ L K+RD GNT++V+EH+ D + ADW++D+GP G GGEI+ SGTP+ VA Sbjct: 305 RDNDRLIESLKKMRDLGNTLIVVEHDEDTMMQADWLIDVGPGAGEFGGEIIASGTPKQVA 364 Query: 926 ECEASHTARFLK 937 + + S T ++L Sbjct: 365 KNKKSITGQYLS 376 Score = 43.1 bits (100), Expect = 0.054, Method: Compositional matrix adjust. Identities = 19/37 (51%), Positives = 29/37 (78%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSL 40 IE++GA +NL+++++ P K I VTG+SGSGKS+L Sbjct: 395 IEIKGASQNNLQSLDVRFPLGKFIAVTGVSGSGKSAL 431 >UniRef50_C7NL29 Excinuclease ATPase subunit n=1 Tax=Kytococcus sedentarius DSM 20547 RepID=C7NL29_KYTSD Length = 875 Score = 395 bits (1016), Expect = e-108, Method: Compositional matrix adjust. Identities = 258/716 (36%), Positives = 369/716 (51%), Gaps = 79/716 (11%) Query: 262 ELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPELSLAGGAIRGWDRRNFYYFQML 321 L+ FS N GACP C GLGV ++ +P+LS+A GAI W + + Sbjct: 144 HLDSDAFSVNTAVGACPECSGLGVVHEPTEASMVPDPDLSIAEGAIAAWP--GAWQGKNY 201 Query: 322 KSLADHYKFDVEAPWGSLSANVHKVVLYGSGKENIEFKYMNDRGDTSIRRHPFEGVLHNM 381 + + +D+ + W L A + +L+ + ++ + +R I+R P+ G + Sbjct: 202 RDITATLGYDITSSWRDLPAADRQWILFTDDQPVVQV--VPERDPERIQR-PYSGTFSSA 258 Query: 382 ERRY-----KETESSAVREELAKFISNRPCASCEGTRLRREARHVYVENTPLPAISDMSI 436 RRY ET+S+ +F+ PC +C+G LR +A V + LP + + + Sbjct: 259 -RRYLMRTLSETKSATQWARALRFVETTPCPACDGHGLRADALAVTWQGRSLPDAAALPL 317 Query: 437 GHAMEFFNNLKLA------GQRAKIAEKILKEIGDRLKFLVNVGLNYLTLSRSAETLSGG 490 + + A R +L ++ RL L+ +GL +L+L R + T+S G Sbjct: 318 AELADLARRRRHALPDEGGSAREGAERLLLGDLLARLDVLLELGLGHLSLGRRSTTVSPG 377 Query: 491 EAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDA 550 E QR+RLA+ + GL GV+YVLDEPS GLH RD E LL L L D GNTV+VVEHD Sbjct: 378 EMQRLRLATLLHTGLFGVVYVLDEPSAGLHPRDTEALLRVLRRLVDAGNTVLVVEHDMAV 437 Query: 551 IRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMS---------------GK 595 + A D V+D+GPGAG GG V+ GP++ + V ES+TG+Y++ G Sbjct: 438 VAACDWVVDVGPGAGEGGGRVLHSGPVDELAGVAESVTGRYLAQPIHPAEVLGADATGGS 497 Query: 596 RKIEVPKKRVPANP-------EKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKST 648 P + A P L +G R + ++ V LTLP+G + +TGVSGSGKS+ Sbjct: 498 TSAGTPGDDLAAEPLPAPRTGSGQLVASGLRRHTVRGVDLTLPLGAVSVVTGVSGSGKSS 557 Query: 649 LINDTLFPIAQRQLNGATIAE--------------------------------------- 669 L++ +A +T A Sbjct: 558 LLDALADVVAMHAQEVSTEAAEEHGEPGTQDVGHPGEGHPGEDAAGAALTASGTGTGQGT 617 Query: 670 -PAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESRARGYTP 728 PAP R + ++++ I Q PIGR+PRS ATYTG +R LFA +++ RGY Sbjct: 618 PPAPARVVLTGGRVERLVRITQKPIGRSPRSTLATYTGAMDRIRSLFAATDDAQERGYGA 677 Query: 729 GRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKYKGKTIHEV 788 GRFSFN GRC C+G G + VE+ F+P Y C +C G RY+ ETL++ ++G I EV Sbjct: 678 GRFSFNTTPGRCPTCEGQGSVSVELLFMPGTYSTCPECHGARYDAETLQVHWEGHRIDEV 737 Query: 789 LDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRG 848 L T+ EARE F P LAR L D+GL Y+ LG AT LSGGEAQR+KLA EL + Sbjct: 738 LGWTVAEARERFAEHPQLARTFGALADLGLDYLTLGHPATDLSGGEAQRIKLATELRVQR 797 Query: 849 TGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADWIVDL 904 TLY+ DEPTTGLH AD+ +LL LH L +T+V+ EH+ + TAD +V++ Sbjct: 798 RTPTLYLFDEPTTGLHPADVHRLLRQLHGLAGASHTVVLAEHDAVAVATADHVVEM 853 Score = 110 bits (276), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 56/116 (48%), Positives = 84/116 (72%), Gaps = 2/116 (1%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 63 I V GAR HNL+++ + IPRD+L+ VTG+SGSGKSSLAF T++AE QRRY E+++ +AR+ Sbjct: 22 ITVTGARLHNLRDVTVSIPRDRLVAVTGVSGSGKSSLAFGTVHAEAQRRYFETVAPFARR 81 Query: 64 FLSLMEKPDVDHIEGLSPAISIEQKS--TSHNPRSTVGTITEIHDYLRLLFARVGE 117 + P V I GL PA+++ Q++ + + RSTVGT+T + LR++F+R G+ Sbjct: 82 LIHAAVDPQVRSITGLPPAVALGQQATTSGTSSRSTVGTVTHTGNTLRMVFSRCGD 137 Score = 95.5 bits (236), Expect = 8e-18, Method: Compositional matrix adjust. Identities = 69/196 (35%), Positives = 108/196 (55%), Gaps = 21/196 (10%) Query: 761 VPCDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEA----REFFDAVP---ALARK---- 809 PC C G + L + ++G+++ + + + E R A+P AR+ Sbjct: 285 TPCPACDGHGLRADALAVTWQGRSLPDAAALPLAELADLARRRRHALPDEGGSAREGAER 344 Query: 810 ---------LQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPT 860 L L+++GL ++ LG+ +TT+S GE QR++LA L G +Y+LDEP+ Sbjct: 345 LLLGDLLARLDVLLELGLGHLSLGRRSTTVSPGEMQRLRLA-TLLHTGLFGVVYVLDEPS 403 Query: 861 TGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGT 920 GLH D + LL VL +L D GNT++V+EH++ V+ DW+VD+GP G GGG +L SG Sbjct: 404 AGLHPRDTEALLRVLRRLVDAGNTVLVVEHDMAVVAACDWVVDVGPGAGEGGGRVLHSGP 463 Query: 921 PETVAECEASHTARFL 936 + +A S T R+L Sbjct: 464 VDELAGVAESVTGRYL 479 Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 59/208 (28%), Positives = 85/208 (40%), Gaps = 43/208 (20%) Query: 605 VPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLI------------ND 652 +PA+ + + +TGAR +NL+DVT+++P +TGVSGSGKS+L + Sbjct: 14 LPASSDGHITVTGARLHNLRDVTVSIPRDRLVAVTGVSGSGKSSLAFGTVHAEAQRRYFE 73 Query: 653 TLFPIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNP--ATYTGVFTP 710 T+ P A+R ++ A + R I GL + + Q S T T Sbjct: 74 TVAPFARRLIHAAVDPQ---VRSITGLP---PAVALGQQATTSGTSSRSTVGTVTHTGNT 127 Query: 711 VRELFAGVPESRARGYTPG-------RFSFNVRGGRCEACQGDGVIK--VEMHFLPD--- 758 +R +F SR Y G FS N G C C G GV+ E +PD Sbjct: 128 LRMVF-----SRCGDYPTGAAHLDSDAFSVNTAVGACPECSGLGVVHEPTEASMVPDPDL 182 Query: 759 ------IYVPCDQCKGKRYNRETLEIKY 780 I +GK Y T + Y Sbjct: 183 SIAEGAIAAWPGAWQGKNYRDITATLGY 210 >UniRef50_C7PP78 ABC transporter related n=6 Tax=Bacteria RepID=C7PP78_CHIPD Length = 754 Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust. Identities = 253/727 (34%), Positives = 380/727 (52%), Gaps = 84/727 (11%) Query: 229 GGTA--VVADMDDPKAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQ 286 GG A V D A L + P GYS +FSFN+P G CPTC+GLG Sbjct: 95 GGNARSTVGTATDIYASLRLLFSRMGNPFVGYS------SIFSFNHPQGMCPTCEGLGFI 148 Query: 287 QYFDPDRVI-------QNPEL--SLAGGAIRGWDRRNFYYFQMLKSLADHYKFDVEAPWG 337 + D ++ + P L + G R + YF K L D+ K + Sbjct: 149 STINTDALLDKDKSLNEGPILFPTFQPGGYRWIRYAHSGYFDRDKKLRDYSK---KELEL 205 Query: 338 SLSANVHKVVLYGSGKENIEFKYMNDRGDTSI-RRHPFEGVLHNMERRYKETESSA---V 393 L A HK D S + + G+L ++ + + ES Sbjct: 206 LLYAEEHK----------------PPHPDKSWGKTMQYIGLLPRIKNDFLKKESKEHHLR 249 Query: 394 REELAKFISNRPCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRA 453 ++EL K I+ C C+G RL + ++ + S M +G + F + L + Sbjct: 250 KKELQKIINTVSCPDCKGKRLNKTVLSCKIKGMDIADCSAMPVGELLAFIHTLS-----S 304 Query: 454 KIAEKILKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLD 513 K I E+ +L+ +V +GL YLTL R+ +TLSGGE+QRI++ +G + ++Y+ D Sbjct: 305 KSFSAIRYELQKKLENVVTIGLQYLTLDRTTDTLSGGESQRIKMVRHLGNSIEDLLYIFD 364 Query: 514 EPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVA 573 EPSIGLH +D + + + +++ GN+V++VEHD D I+ ADHVID+GP +GVHGGE++ Sbjct: 365 EPSIGLHAKDLDNISKIIRKIKEKGNSVLIVEHDPDIIKIADHVIDVGPLSGVHGGEIIY 424 Query: 574 EGPLEAIMAVPESLTGQYMSGKRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVG 633 EG + ++A + TG+Y S KR + P + +++ A NLK++T+ +P Sbjct: 425 EGSFKGLLA-SKGKTGKYFSQKRTY----RDNPRTAQTSIRIENASLFNLKNITVDIPRN 479 Query: 634 LFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPI 693 + T +TGV+GSGKSTLI L P+ +V I+QSPI Sbjct: 480 VLTVVTGVAGSGKSTLIGKVL-PL-----------------------QLPEVKIINQSPI 515 Query: 694 GRTPRSNPATYTGVFTPVRELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEM 753 + RS TY + +R LFA + R ++ G C C+G GV K+++ Sbjct: 516 TGSQRSTLLTYLDLSDKLRRLFASANKVSDRLFSTNSL------GACPDCKGLGVEKIDL 569 Query: 754 HFLPDIYVPCDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTL 813 F+ DI PCD C G ++ + L+ K+ K I EVL++T+EEA FF+ + + L Sbjct: 570 AFMDDIEQPCDVCHGTGFDPKVLKYKFLHKNIAEVLNLTVEEAMTFFEQYDFVTH-FELL 628 Query: 814 MDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLD 873 + +GL Y++LGQ +T SGGE QR+KL+ EL++ + +LDEP+TGLH AD QLL Sbjct: 629 IALGLGYLKLGQRLSTFSGGERQRLKLSAELAE---ANKILVLDEPSTGLHPADTGQLLQ 685 Query: 874 VLHKLRDQGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTA 933 VL +L +QGNT++VIEHNLDVI ADWI+D+GP G GGE++ G + E + S TA Sbjct: 686 VLDRLVEQGNTVIVIEHNLDVIAQADWILDIGPGAGKYGGELVFQGNVRQLLENKVSETA 745 Query: 934 RFLKPML 940 ++LK L Sbjct: 746 KYLKQHL 752 Score = 117 bits (293), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 61/115 (53%), Positives = 82/115 (71%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 63 I+V GAR +NLKNI+L IP+ +++V TG+SGSGKSSL F+T+ AE QR+ E+ ++ R Sbjct: 8 IKVSGARQNNLKNISLEIPKGRIVVFTGVSGSGKSSLVFETIGAEAQRQVNETQHSFTRN 67 Query: 64 FLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEP 118 LS + PDVD IE L+ + I QK N RSTVGT T+I+ LRLLF+R+G P Sbjct: 68 RLSHLGIPDVDKIEHLNVPVIISQKRIGGNARSTVGTATDIYASLRLLFSRMGNP 122 Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 53/145 (36%), Positives = 79/145 (54%), Gaps = 8/145 (5%) Query: 611 KVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIA-- 668 +++K++GAR NNLK+++L +P G TGVSGSGKS+L+ +T+ AQRQ+N + Sbjct: 6 RMIKVSGARQNNLKNISLEIPKGRIVVFTGVSGSGKSSLVFETIGAEAQRQVNETQHSFT 65 Query: 669 ----EPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESRAR 724 D+ +EH + + I Q IG RS T T ++ +R LF+ + Sbjct: 66 RNRLSHLGIPDVDKIEHLNVPVIISQKRIGGNARSTVGTATDIYASLRLLFSRMGNPFV- 124 Query: 725 GYTPGRFSFNVRGGRCEACQGDGVI 749 GY+ FSFN G C C+G G I Sbjct: 125 GYS-SIFSFNHPQGMCPTCEGLGFI 148 Score = 44.7 bits (104), Expect = 0.020, Method: Compositional matrix adjust. Identities = 36/110 (32%), Positives = 50/110 (45%), Gaps = 30/110 (27%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 63 I + A NLKNI + IPR+ L VVTG++GSGKS+L L Sbjct: 459 IRIENASLFNLKNITVDIPRNVLTVVTGVAGSGKSTLIGKVLP----------------- 501 Query: 64 FLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFA 113 ++ P+V I Q + + RST+ T ++ D LR LFA Sbjct: 502 ----LQLPEVK---------IINQSPITGSQRSTLLTYLDLSDKLRRLFA 538 >UniRef50_A1SIJ3 ABC transporter related n=10 Tax=Bacteria RepID=A1SIJ3_NOCSJ Length = 836 Score = 389 bits (998), Expect = e-106, Method: Compositional matrix adjust. Identities = 244/702 (34%), Positives = 384/702 (54%), Gaps = 29/702 (4%) Query: 250 NFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPELSLAGGAIRG 309 + CP CG F+FN+ GACP C G G + D ++ + S+A GA+ Sbjct: 145 DLVCPECGAQFSPPGAESFAFNS-GGACPVCQGTGTVRDVDDAALVPDESRSIADGAVAP 203 Query: 310 WDRRNFYYFQMLKSLADHYKFDVEAPWGSLSANVHKVVLYGSG-KENIEFKYMNDRGDTS 368 W + ++ + P+ L+ ++VL G K++I N + Sbjct: 204 W---GMFGLTVMPQVVAELGVRTGVPYADLTDAEREIVLDGPQVKKHIRVPSRNGK---- 256 Query: 369 IRRHPFEGVLHNMERRYKETESSAVREE----LAKFISNRPCASCEGTRLRREARHVYVE 424 + N +E ++A E+ +A+FI+ C +C GTRL EAR V Sbjct: 257 --LFDLDFTYRNARLAVREAMNNATSEKGLARVARFITAHTCHACGGTRLSEEARGTQVA 314 Query: 425 NTPLPAISDMSIGHAMEFFNNLK--LAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTLSR 482 L + +++ A+ + ++ L +A ++ + + L +GL YL+L R Sbjct: 315 GIDLAEATALTLDEAVAWVPSVTDTLPADMHPMARMLIIQFEAMARRLTELGLGYLSLDR 374 Query: 483 SAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVI 542 + TLS GE QR++LA + GV+YVLDEPSIGLH + E L+ + L D GN+V+ Sbjct: 375 TGSTLSTGERQRVQLARAVRNDTTGVLYVLDEPSIGLHPANVEGLVAVMRDLLDNGNSVV 434 Query: 543 VVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEVPK 602 VV+HD +R AD +I++GPG+G GG V+ +G + + A P SL G +++G + V + Sbjct: 435 VVDHDVQVLREADWMIELGPGSGADGGTVLTQGTIAQVAADPSSLIGPFLTGGVDV-VRR 493 Query: 603 KRVPANPEK---VLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQ 659 R P + V++L +R + ++ + +T+P G T +TG+SGSGK+TL+ D+L P + Sbjct: 494 LRTPLETSEDRGVIRLVTSRLHTVQALDVTIPQGRLTAVTGMSGSGKTTLVLDSLVPALR 553 Query: 660 RQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVP 719 + + + D G+ D V D SPIG RS ATY+G+ +R +A Sbjct: 554 ATADNTPLPDHVVSVDTAGVSRVDVV---DASPIGVNVRSTVATYSGILDELRRAYAASD 610 Query: 720 ESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRY----NRET 775 ++ RG T FS+N RC C+G G + +++ FLPD+ +PC C G RY N Sbjct: 611 AAKDRGLTAADFSYNTGSLRCPRCEGTGQVVLDVQFLPDVDIPCPDCGGARYSPSSNDIL 670 Query: 776 LEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEA 835 L+ + +++ +L +T+ +A E D +P + RKLQTL+D+GL Y+ LG+ LSGGEA Sbjct: 671 LDTEDGTQSLPGLLALTVRQAHEVLDGLPKVRRKLQTLIDLGLGYLTLGEGTPALSGGEA 730 Query: 836 QRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVI 895 QR+KLA EL + +G TL++LDEP+ GLH D Q L+ VL +L +G TIV++EH+L++I Sbjct: 731 QRLKLASELGRDQSG-TLFVLDEPSVGLHPLDTQVLIGVLDRLLAKGATIVLVEHDLELI 789 Query: 896 KTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLK 937 AD ++D+GP GG+ GG I+ SGTPE +A S T R+L+ Sbjct: 790 ANADHVIDMGPGGGTAGGRIIASGTPEHIAASTDSITGRYLR 831 Score = 119 bits (297), Expect = 8e-25, Method: Compositional matrix adjust. Identities = 62/144 (43%), Positives = 92/144 (63%), Gaps = 4/144 (2%) Query: 2 DKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYA 61 + I+VRGAR HNLK++++ +P D L+ + G+SGSGKSSLA LYAEG RRYVE+LS Y Sbjct: 10 NGIQVRGARVHNLKDVSVDVPLDGLVAIAGVSGSGKSSLAMGVLYAEGSRRYVEALSTYT 69 Query: 62 RQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCP 121 R+ ++ + VD + + A+++ Q+ RST GT TE+ + LR++F+R+G CP Sbjct: 70 RRRMAHATRAQVDEVRHVPAALALRQRPAVPGVRSTFGTSTELLNVLRVMFSRLGAHLCP 129 Query: 122 D-HDVPLAAQTVSQMVDNVLSQPE 144 + H + A T+ D L PE Sbjct: 130 NGHRL---APTIDVAADKDLVCPE 150 Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 48/177 (27%), Positives = 75/177 (42%), Gaps = 46/177 (25%) Query: 613 LKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFP------------IAQR 660 +++ GAR +NLKDV++ +P+ I GVSGSGKS+L L+ +R Sbjct: 12 IQVRGARVHNLKDVSVDVPLDGLVAIAGVSGSGKSSLAMGVLYAEGSRRYVEALSTYTRR 71 Query: 661 QLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGV-- 718 ++ AT A+ + + H + + Q P RS T T + +R +F+ + Sbjct: 72 RMAHATRAQ------VDEVRHVPAALALRQRPAVPGVRSTFGTSTELLNVLRVMFSRLGA 125 Query: 719 -----------------------PESRARGYTPG--RFSFNVRGGRCEACQGDGVIK 750 PE A+ PG F+FN GG C CQG G ++ Sbjct: 126 HLCPNGHRLAPTIDVAADKDLVCPECGAQFSPPGAESFAFN-SGGACPVCQGTGTVR 181 Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 37/115 (32%), Positives = 57/115 (49%), Gaps = 19/115 (16%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 63 I + +R H ++ +++ IP+ +L VTG+SGSGK++L D+L V +L A A Sbjct: 507 IRLVTSRLHTVQALDVTIPQGRLTAVTGMSGSGKTTLVLDSL--------VPALRATADN 558 Query: 64 FLSLMEKPDVDHI-----EGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFA 113 P DH+ G+S ++ N RSTV T + I D LR +A Sbjct: 559 ------TPLPDHVVSVDTAGVSRVDVVDASPIGVNVRSTVATYSGILDELRRAYA 607 >UniRef50_A6VRX7 ABC transporter related n=4 Tax=Bacteria RepID=A6VRX7_MARMS Length = 761 Score = 389 bits (998), Expect = e-106, Method: Compositional matrix adjust. Identities = 252/702 (35%), Positives = 368/702 (52%), Gaps = 67/702 (9%) Query: 245 LLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPELSLAG 304 LLFS P GYS +FSFN+P G CPTC GLG+ FD D V+ + SL Sbjct: 117 LLFS-RLGEPFVGYS------NVFSFNHPQGMCPTCQGLGMVDEFDLD-VMFDRSKSLNQ 168 Query: 305 GAIR--GWDRRNFYYFQMLKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKENIEFKYMN 362 GAIR + R F + K A FD + P +A+ + +LY +++ Sbjct: 169 GAIRFPTFARGTFRW----KRYAYSGLFDCDKPLADYTADEWQTLLYA---DDLAVSNPL 221 Query: 363 DRGDTSIRRHPFEGVLHNMERRYKETESS----AVREELAKFISNRPCASCEGTRLRREA 418 +S R F+GV+ R Y + E S A RE LA I+ + C +C G RL Sbjct: 222 PGWPSSAR---FQGVVPRFRRAYLDHEPSRLTKAEREGLAHVITRQRCQACGGARLNPTI 278 Query: 419 RHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNVGLNYL 478 ++ + ++ I + F + ++ +L I +RL+ + +GL+YL Sbjct: 279 LSCKIKGKSIADCGNLEISDLLLFIRTID-----SEAIATVLTAIIERLEQMRAIGLDYL 333 Query: 479 TLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLG 538 +L R +LSGGE+QR+++ +G+ L + Y+ DEPS+GLH D +L L LRD G Sbjct: 334 SLGRETASLSGGESQRVKMVRHLGSSLADIAYIFDEPSVGLHPSDVHQLNTLLRSLRDKG 393 Query: 539 NTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKI 598 NTV+VVEHD D I ADHV+D+GPGAG GG VV +G + ++LTG+Y+ Sbjct: 394 NTVLVVEHDPDVIAIADHVVDMGPGAGKDGGHVVYQGDYAGLRQA-DTLTGRYLLRA--- 449 Query: 599 EVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIA 658 P R P + + L +NL+DV +++P G+ T +TGV+GSGKSTL+N L Sbjct: 450 -TPMIREPRSATGQIALQHLSLHNLQDVNVSIPTGVLTVVTGVAGSGKSTLVNRLL---- 504 Query: 659 QRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGV 718 L H I IDQ +G T RS+ ++YTGV +R F Sbjct: 505 --------------------LRHCPDAILIDQKSLGGTRRSSVSSYTGVLDEIRSGF--- 541 Query: 719 PESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEI 778 ++A G FS N +G C AC+G G+I ++ F+ + PCD C +N I Sbjct: 542 --TKASGQPASLFSNNAQGA-CPACKGLGLIHTDLAFMDSVETPCDACSATGFNEAARAI 598 Query: 779 KYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRV 838 + G I +VL ++E+A F A + L L +VGL Y+ LGQ TLSGGE QR+ Sbjct: 599 TWMGCNIAQVLAFSVEQALRHFQAYQEIVEPLHRLSNVGLGYLSLGQRLNTLSGGERQRL 658 Query: 839 KLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTA 898 KLA L++ G +LY+ DEPT+GLH +D+ +LL +L L +G T++V+EHNLDV+ A Sbjct: 659 KLACRLAEEG---SLYVFDEPTSGLHMSDVDRLLTILDDLTQRGATVIVVEHNLDVMAHA 715 Query: 899 DWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLKPML 940 DW++++GP G GG+++ G P + S T FL+ L Sbjct: 716 DWLIEMGPGAGKKGGKVIFEGLPTAMISASKSVTGPFLRHHL 757 Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 55/115 (47%), Positives = 77/115 (66%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 63 +E+ GAR +NL+++ + +P+ + V TG+SGSGKSSL FDT+ AE QR+ ES SA+ R Sbjct: 11 MEIIGARNNNLRSVTVKVPKHCITVFTGVSGSGKSSLVFDTIAAESQRQLNESHSAFIRH 70 Query: 64 FLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEP 118 L +P D + L +I ++QK N RSTVGT T+I LRLLF+R+GEP Sbjct: 71 RLPHYGQPQADALCNLPASIVVDQKPLGGNARSTVGTATDIQPLLRLLFSRLGEP 125 Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 57/148 (38%), Positives = 80/148 (54%), Gaps = 8/148 (5%) Query: 608 NPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLN---G 664 +P + +++ GAR NNL+ VT+ +P T TGVSGSGKS+L+ DT+ +QRQLN Sbjct: 6 SPYQDMEIIGARNNNLRSVTVKVPKHCITVFTGVSGSGKSSLVFDTIAAESQRQLNESHS 65 Query: 665 ATIAEPAPYR---DIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPES 721 A I P+ L + I +DQ P+G RS T T + +R LF+ + E Sbjct: 66 AFIRHRLPHYGQPQADALCNLPASIVVDQKPLGGNARSTVGTATDIQPLLRLLFSRLGEP 125 Query: 722 RARGYTPGRFSFNVRGGRCEACQGDGVI 749 GY+ FSFN G C CQG G++ Sbjct: 126 FV-GYS-NVFSFNHPQGMCPTCQGLGMV 151 >UniRef50_C5C6C3 ABC transporter related n=3 Tax=Actinomycetales RepID=C5C6C3_BEUC1 Length = 798 Score = 388 bits (997), Expect = e-106, Method: Compositional matrix adjust. Identities = 289/864 (33%), Positives = 420/864 (48%), Gaps = 119/864 (13%) Query: 103 EIHDYLRLLFARVGEPRCPDHDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEH 162 + HD++R+ AR R D ++P TV V GK ++ A I E + Sbjct: 18 DAHDFIRVRGARENNLRDVDVEIPKRRLTVFTGVSG-----SGKSSLVFATIAAESRRLI 72 Query: 163 TKTLENLASQGYIRA--RIDGEVCD------LSDPPKLELQKKHTIEVVVDRFKVRDDLT 214 +T QG++ + R D +V + L D ++ + T+ V D + +L Sbjct: 73 DETYSTFV-QGFMPSLPRPDVDVLEGITTAILVDQERMGANVRSTVGTVTDANAMLRNLF 131 Query: 215 QRLAESF---ETALELSGGTAVVADMDDPKAEELLFSANFACPICGYSMRELEPRLFSFN 271 R+ + + TA + T+ + +FS G + E+E ++ Sbjct: 132 SRIGDPYVGPPTAFSFNIPTSTASG---------VFST-------GKAGGEVEKKVVRNQ 175 Query: 272 -NPAGACPTCDGLGVQQYFDPDRVIQNPELSLAGGAI-------RGWDRRNFYYFQMLKS 323 G CP C+G G D VI + SL GAI GW M+K Sbjct: 176 VYLGGMCPECEGRGTVSDLDLS-VIVDESKSLHEGAILVPGYKADGW---------MVKG 225 Query: 324 LADHYKFDVEAPWGSLSANVHKVVLYGSGKENIEFKYMNDRGDTSIRRHPFEGVL----H 379 ++ D + P + LY +E + K + ++G++ Sbjct: 226 FSETGLLDGDKPIRDYTDTERHDFLY---REKGKLKALG-------MNMTYQGLIPKLQE 275 Query: 380 NMERRYKETESSAVR---EELAKFISNRPCASCEGTRLRREARHVYVENTPLPAISDMSI 436 +M R E+ +R E A F++ C +CEGTRL AR V + + M I Sbjct: 276 SMFSRAPESLQPHIRAFVERAAVFVA---CPACEGTRLNDSARSAKVNGASIADVCRMQI 332 Query: 437 GHAMEFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIR 496 A E+ + G I L + D+ V +GL YL+L R+A TLSGGEAQR + Sbjct: 333 SDAAEWARGVDDPGVAPLIGS--LLHLFDKF---VEIGLGYLSLDRAAGTLSGGEAQRTK 387 Query: 497 LASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADH 556 + +G+ L V YV DEP+IGLH D ER+ L+ LRD GNTV+VVEH + I DH Sbjct: 388 MIRHLGSALTDVTYVFDEPTIGLHPHDIERMNRLLLDLRDKGNTVLVVEHKPETIAVGDH 447 Query: 557 VIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEVPKKRVPANPEKVLKLT 616 VID+GPGAG GG V EG +E + + ++LTG+++ + + K P L++ Sbjct: 448 VIDLGPGAGTDGGTVCFEGTVEGLRS-SDTLTGRHLDDRTHV----KDSVRTPSGALEIR 502 Query: 617 GARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAEPAPYRDI 676 GA NNL V + +P G+ T +TGV+GSGKS+LI+ L A R Sbjct: 503 GASQNNLTGVDVDVPTGVLTVVTGVAGSGKSSLIHGNL---AGR---------------- 543 Query: 677 QGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESRARGYTPGRFSFNVR 736 D V+ +DQ I + RSNPATYTG+ P+R+ FA +A P FS N Sbjct: 544 ------DGVVVVDQGAIKGSRRSNPATYTGLLEPIRKAFA-----KANDVKPALFSSNSE 592 Query: 737 GGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEA 796 G C C+G+G I E+ F+ + PC+ C GKR+ LE G I EVLD+++ +A Sbjct: 593 GA-CPTCKGNGRIYTELGFMETVETPCEDCGGKRFMASVLEYTLGGLNIAEVLDLSVAQA 651 Query: 797 REFF----DAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQT 852 FF +PA + L L DVGL YI+LGQ TLSGGE QR+KLA E+ + G+ Sbjct: 652 HAFFREGEAKIPAAHKILARLEDVGLGYIKLGQPLNTLSGGERQRLKLAMEMGESGS--- 708 Query: 853 LYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADWIVDLGPEGGSGG 912 +Y+LDEPTTGLH AD++ LL +L +L D G ++VVIEH+ V+ ADWI+DLGP G G Sbjct: 709 VYVLDEPTTGLHLADVENLLALLDRLVDGGKSVVVIEHHQAVMAHADWIIDLGPGAGHDG 768 Query: 913 GEILVSGTPETVAECEASHTARFL 936 G ++ G P + ++ T L Sbjct: 769 GRVVFEGAPADLVAARSTLTGEHL 792 Score = 120 bits (301), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 75/191 (39%), Positives = 103/191 (53%), Gaps = 16/191 (8%) Query: 405 PCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKI--AEKILKE 462 PC C G R + + + D+S+ A FF AKI A KIL Sbjct: 617 PCEDCGGKRFMASVLEYTLGGLNIAEVLDLSVAQAHAFFRE-----GEAKIPAAHKILAR 671 Query: 463 IGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQR 522 + D VGL Y+ L + TLSGGE QR++LA ++G G +YVLDEP+ GLH Sbjct: 672 LED-------VGLGYIKLGQPLNTLSGGERQRLKLAMEMGES--GSVYVLDEPTTGLHLA 722 Query: 523 DNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMA 582 D E LL L L D G +V+V+EH + + AD +ID+GPGAG GG VV EG ++A Sbjct: 723 DVENLLALLDRLVDGGKSVVVIEHHQAVMAHADWIIDLGPGAGHDGGRVVFEGAPADLVA 782 Query: 583 VPESLTGQYMS 593 +LTG++++ Sbjct: 783 ARSTLTGEHLA 793 Score = 114 bits (284), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 55/117 (47%), Positives = 84/117 (71%) Query: 2 DKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYA 61 D I VRGAR +NL+++++ IP+ +L V TG+SGSGKSSL F T+ AE +R E+ S + Sbjct: 21 DFIRVRGARENNLRDVDVEIPKRRLTVFTGVSGSGKSSLVFATIAAESRRLIDETYSTFV 80 Query: 62 RQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEP 118 + F+ + +PDVD +EG++ AI ++Q+ N RSTVGT+T+ + LR LF+R+G+P Sbjct: 81 QGFMPSLPRPDVDVLEGITTAILVDQERMGANVRSTVGTVTDANAMLRNLFSRIGDP 137 Score = 62.4 bits (150), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 52/178 (29%), Positives = 78/178 (43%), Gaps = 36/178 (20%) Query: 607 ANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLN--- 663 A+ +++ GAR NNL+DV + +P T TGVSGSGKS+L+ T+ ++R ++ Sbjct: 17 ADAHDFIRVRGARENNLRDVDVEIPKRRLTVFTGVSGSGKSSLVFATIAAESRRLIDETY 76 Query: 664 -----GATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFA-- 716 G + P P D+ LE I +DQ +G RS T T +R LF+ Sbjct: 77 STFVQGFMPSLPRP--DVDVLEGITTAILVDQERMGANVRSTVGTVTDANAMLRNLFSRI 134 Query: 717 -------------GVPESRARG-YTPGRFSFNVR----------GGRCEACQGDGVIK 750 +P S A G ++ G+ V GG C C+G G + Sbjct: 135 GDPYVGPPTAFSFNIPTSTASGVFSTGKAGGEVEKKVVRNQVYLGGMCPECEGRGTVS 192 Score = 42.4 bits (98), Expect = 0.086, Method: Compositional matrix adjust. Identities = 20/42 (47%), Positives = 29/42 (69%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTL 45 +E+RGA +NL +++ +P L VVTG++GSGKSSL L Sbjct: 499 LEIRGASQNNLTGVDVDVPTGVLTVVTGVAGSGKSSLIHGNL 540 >UniRef50_D2Q2S9 ABC transporter related protein n=6 Tax=Bacteria RepID=D2Q2S9_9ACTO Length = 753 Score = 380 bits (975), Expect = e-103, Method: Compositional matrix adjust. Identities = 250/682 (36%), Positives = 351/682 (51%), Gaps = 72/682 (10%) Query: 245 LLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPELSLAG 304 LLFS + P G S FSFN+PAG CP C GLG DR + + SLA Sbjct: 111 LLFSRT-STPYVGESGH------FSFNDPAGMCPACAGLGEVVVSAVDRFL-DLNKSLAA 162 Query: 305 GAIR--GWDRRNFYYFQMLKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKENIEFKYMN 362 GAI G+ ++Y Q AD FD++ P S +LYG G+ + Sbjct: 163 GAILLPGFGHGGYWYNQY----ADIGSFDLDTPLREWSPTERDALLYG-GEAAAKLGTKP 217 Query: 363 DRGDTSIRRHPFEGVLHNMERRYKETE---SSAVREELAKFISNRPCASCEGTRLRREAR 419 R +EGV+ ER Y T S ++ + +F + C C G RL AR Sbjct: 218 PR--------DYEGVVERFERIYLHTSGDLSERKQDVIRRFTRSTTCPDCHGDRLTEAAR 269 Query: 420 HVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLT 479 V + ++ + I + +++ + RL+ ++ +GL YL Sbjct: 270 TATVLGRTIGELARLEITDLAALVTKVD-----DPAVAPVVRALTARLEAMITIGLGYLH 324 Query: 480 LSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGN 539 L R+ +LSGGE+QRI+ +G+ L ++YV DEP++GLH D + L LRD GN Sbjct: 325 LGRATTSLSGGESQRIKTVKHLGSSLTEMLYVFDEPTVGLHPHDTPAMTALLEQLRDKGN 384 Query: 540 TVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIE 599 +V+VVEHD D + AD +I++GPGAG GG +V +G ++ + TG+ + +R Sbjct: 385 SVLVVEHDPDVMAVADQIIEVGPGAGDDGGRLVFQGGFGELLEA-GTPTGRALRRRR--- 440 Query: 600 VPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQ 659 P VP + + A NNL+ VT+ LP G+ T +TGV+GSGKS+L + Sbjct: 441 -PITPVPRTGHGSITIADATRNNLRHVTVDLPAGVLTVLTGVAGSGKSSLAAEL------ 493 Query: 660 RQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVP 719 +E V+ IDQ + RS P T+TG+ VR FA Sbjct: 494 -------------------VEQHAAVV-IDQKAVTTNRRSTPITWTGIAPAVRRTFA--- 530 Query: 720 ESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIK 779 + G + FS N G C C+G GVI ++ F+ C+ C G+RY E L + Sbjct: 531 --QRNGVSAALFSANSEGA-CPTCKGLGVIHTDLAFMDGQETVCESCDGRRYTAEVLAYQ 587 Query: 780 YKGKTIHEVLDMTIEEA-REFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRV 838 G +I ++ D+T++EA R F D A+ + L + DVGL Y+RLGQ TTLSGGE QR+ Sbjct: 588 VAGLSIADIDDLTVDEAVRRFPDR--AVVKALGAIADVGLGYLRLGQPLTTLSGGECQRL 645 Query: 839 KLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTA 898 K+AREL TLY+LDEPTTGLH DI LL +L +L D+G+T+VVIEHNLDVI+ A Sbjct: 646 KIARELHD-ADKPTLYVLDEPTTGLHLNDIDTLLGILDQLVDRGHTVVVIEHNLDVIRQA 704 Query: 899 DWIVDLGPEGGSGGGEILVSGT 920 DW+VDLGP G GG +L GT Sbjct: 705 DWVVDLGPGPGQHGGRVLYEGT 726 Score = 120 bits (300), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 68/176 (38%), Positives = 98/176 (55%), Gaps = 15/176 (8%) Query: 406 CASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGD 465 C SC+G R E V + I D+++ A+ F + ++K +G Sbjct: 571 CESCDGRRYTAEVLAYQVAGLSIADIDDLTVDEAVRRFPD-----------RAVVKALG- 618 Query: 466 RLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNE 525 + +VGL YL L + TLSGGE QR+++A ++ +YVLDEP+ GLH D + Sbjct: 619 ---AIADVGLGYLRLGQPLTTLSGGECQRLKIARELHDADKPTLYVLDEPTTGLHLNDID 675 Query: 526 RLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIM 581 LLG L L D G+TV+V+EH+ D IR AD V+D+GPG G HGG V+ EG + +M Sbjct: 676 TLLGILDQLVDRGHTVVVIEHNLDVIRQADWVVDLGPGPGQHGGRVLYEGTVRDLM 731 Score = 115 bits (289), Expect = 7e-24, Method: Compositional matrix adjust. Identities = 57/115 (49%), Positives = 77/115 (66%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 63 I +R ART+NL ++ IPR++L+V G+SGSGKSSL FDT+ AE + E+ +AR Sbjct: 5 IRIREARTNNLAGLSADIPRNQLVVFAGISGSGKSSLVFDTVAAEAGHQLNETFPPFARN 64 Query: 64 FLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEP 118 L +PDV+ I+GLSP + I+Q+ N RSTVGTIT+ YLRLLF+R P Sbjct: 65 RLPRWSRPDVEEIDGLSPVVVIDQRRLGGNARSTVGTITDTWTYLRLLFSRTSTP 119 Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 53/154 (34%), Positives = 73/154 (47%), Gaps = 20/154 (12%) Query: 611 KVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAEP 670 K +++ AR NNL ++ +P G+SGSGKS+L+ DT+ A QLN T Sbjct: 3 KHIRIREARTNNLAGLSADIPRNQLVVFAGISGSGKSSLVFDTVAAEAGHQLN-ETFPPF 61 Query: 671 APYR-------DIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESRA 723 A R D++ ++ V+ IDQ +G RS T T +T +R LF + Sbjct: 62 ARNRLPRWSRPDVEEIDGLSPVVVIDQRRLGGNARSTVGTITDTWTYLRLLF-------S 114 Query: 724 RGYTP-----GRFSFNVRGGRCEACQGDGVIKVE 752 R TP G FSFN G C AC G G + V Sbjct: 115 RTSTPYVGESGHFSFNDPAGMCPACAGLGEVVVS 148 >UniRef50_B8I5E2 ABC transporter related n=4 Tax=Clostridium RepID=B8I5E2_CLOCE Length = 783 Score = 379 bits (973), Expect = e-103, Method: Compositional matrix adjust. Identities = 245/690 (35%), Positives = 368/690 (53%), Gaps = 47/690 (6%) Query: 263 LEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPELSLA----GGAIRGWDRRNFYYF 318 L +F N+P G C C G G + D D++ + L + G RG ++ Sbjct: 126 LSMEMFQKNSPKGMCVKCLGSGTVKKVDEDKLFGDLSLKVEDVCLGLGKRGSTKK----- 180 Query: 319 QMLKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKENIEFKYMNDRGDTSIRRH-PFEGV 377 ML S ++ + SL+ + YG D G +S P+ + Sbjct: 181 -MLDSFYKYHNISPDQKLSSLTDEQLFCLKYG------------DSGKSSFMGFIPW--I 225 Query: 378 LHNMERRYKETESSAVREELAKFISNRPCASCEGTRLRREARHVYVENTPLPAISDMSIG 437 H + + A +++ C C GT L A + + + ++ I Sbjct: 226 FHVTNGAFSTNSRLSHLLTEAGYMTKPSCPKCGGTGLGVHASSTTIGGKTISELENIYIK 285 Query: 438 HAMEFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRL 497 +F N L +R+ + L EI +L +V+VGL++L+LSR TLSGGE QR+ L Sbjct: 286 DLFDFLNTTPL--KRSPL----LNEILTKLSCMVDVGLHHLSLSRPVPTLSGGEIQRLFL 339 Query: 498 ASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHV 557 AS I A + +++V DEP+IGLH+ + E+L+ + +L + GNTVI VEHDE+ +R AD++ Sbjct: 340 ASYIIAEMDSIIFVFDEPTIGLHEVEKEKLISIIRNLVNRGNTVIAVEHDENFMRCADYI 399 Query: 558 IDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEVPKKRVPANPEKVLKLTG 617 ID+GP AG++GGE + +G E + S T Y+ + + N +K+LK+ Sbjct: 400 IDLGPFAGINGGERIFQGSFEEFLQCKHSNTAPYLKNNDILNMKSTYRTVNSDKILKVEN 459 Query: 618 ARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAE-------- 669 A +NLK+VT+ +P+GL + GVSGSGKS+LI+DTL P + LN + + Sbjct: 460 ANIHNLKNVTVDIPLGLMVGVAGVSGSGKSSLISDTLVPKLKILLNNKFVGDQNEDNEGI 519 Query: 670 PAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESRARGYTPG 729 P I G E K + IDQ PIGR+ S PATYTGVF +R LFA + G + G Sbjct: 520 PEDNSVISGWERIKKCLVIDQKPIGRSRTSCPATYTGVFDRIRALFA-----KESGSSAG 574 Query: 730 RFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKYKGKTIHEVL 789 F+ N GG C+ C+GDG + + F I C+ C G + E LE+ GK I EVL Sbjct: 575 LFTVNSEGG-CKVCKGDGEVHYHVGFGNFIDTECEACSGTGFIPEALEVTLNGKNIKEVL 633 Query: 790 DMTIEEAREFFDAV-PALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSK-R 847 T++EA FF + + L TL VG+ YI LGQ T+SGGE+QR+KLA+ELSK + Sbjct: 634 SFTVDEAVLFFKGRDKQIDKILATLQRVGMGYITLGQKTPTISGGESQRIKLAKELSKGQ 693 Query: 848 GTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADWIVDLGPE 907 +YILDEPTTGL F D +L+ ++ +L +GNT++V EH+ ++ D+I ++GP Sbjct: 694 AAKDAVYILDEPTTGLSFHDSVRLMKLMEELVTKGNTVIVTEHDPYILSNCDYIFEMGPG 753 Query: 908 GGSGGGEILVSGTPETVAECEASHTARFLK 937 GGS GG+++ +G+P + + S R+LK Sbjct: 754 GGSDGGKLIAAGSPVDLKNNQNSIIGRYLK 783 Score = 117 bits (292), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 66/131 (50%), Positives = 87/131 (66%), Gaps = 6/131 (4%) Query: 2 DKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYA 61 D IE++ AR HNLK I++ IP++KL V+TG+SGSGKSSLAFDTLY EG+RRY L Sbjct: 3 DFIEIKNARIHNLKGIDVKIPKNKLTVITGVSGSGKSSLAFDTLYEEGKRRY---LMFSG 59 Query: 62 RQFLSLMEKPDVDHIEGLSPAISIEQKSTSH-NPRSTVGTITEIHDYLRLLFARVGEPRC 120 QF+ + P D I GLSP +++EQ+ NPRSTVGT T+I + L +LFA G Sbjct: 60 TQFM-IDSTPTFDSISGLSPTVAVEQRIIRQSNPRSTVGTRTKIGNILAMLFAAYGTRDS 118 Query: 121 P-DHDVPLAAQ 130 D +PL+ + Sbjct: 119 KYDDGLPLSME 129 Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 48/150 (32%), Positives = 70/150 (46%), Gaps = 16/150 (10%) Query: 613 LKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQ---LNGA--TI 667 +++ AR +NLK + + +P T ITGVSGSGKS+L DTL+ +R+ +G I Sbjct: 5 IEIKNARIHNLKGIDVKIPKNKLTVITGVSGSGKSSLAFDTLYEEGKRRYLMFSGTQFMI 64 Query: 668 AEPAPYRDIQGLEHFDKVIDIDQSPIGRT-PRSNPATYTGVFTPVRELFAGVPESRARGY 726 + I GL + ++Q I ++ PRS T T + + LFA +R Y Sbjct: 65 DSTPTFDSISGLS---PTVAVEQRIIRQSNPRSTVGTRTKIGNILAMLFAAYG-TRDSKY 120 Query: 727 TPG------RFSFNVRGGRCEACQGDGVIK 750 G F N G C C G G +K Sbjct: 121 DDGLPLSMEMFQKNSPKGMCVKCLGSGTVK 150 Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust. Identities = 38/118 (32%), Positives = 58/118 (49%), Gaps = 7/118 (5%) Query: 2 DKI-EVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQ----RRYVES 56 DKI +V A HNLKN+ + IP ++ V G+SGSGKSSL DTL + + ++V Sbjct: 452 DKILKVENANIHNLKNVTVDIPLGLMVGVAGVSGSGKSSLISDTLVPKLKILLNNKFVGD 511 Query: 57 LSAYARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFAR 114 + + + E + + I+QK + S T T + D +R LFA+ Sbjct: 512 QNEDNEGIPE--DNSVISGWERIKKCLVIDQKPIGRSRTSCPATYTGVFDRIRALFAK 567 >UniRef50_A6VPU1 ABC transporter related n=1 Tax=Actinobacillus succinogenes 130Z RepID=A6VPU1_ACTSZ Length = 754 Score = 375 bits (964), Expect = e-102, Method: Compositional matrix adjust. Identities = 244/707 (34%), Positives = 374/707 (52%), Gaps = 84/707 (11%) Query: 245 LLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPELSLAG 304 L+FS P G SM +S N+P G CP C GLG Q D R+ + SL+ Sbjct: 112 LMFS-RIGEPSAGGSMA------YSPNHPLGMCPHCTGLGEQLVLDESRLF-DVNKSLSE 163 Query: 305 GAI------RGWDRRNFYYFQMLKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKE-NIE 357 GAI GW Y +Q L+ K S +++ GS + IE Sbjct: 164 GAILFSQFSAGWQT---YLYQANPLLSADKKLR------DFSDKEWEILKNGSEQPIKIE 214 Query: 358 FKYMNDRGDTSIRRHPFEGVLHNMERRYKETESS----AVREELAKFISNRPCASCEGTR 413 + N+ G + + +EGVL R Y + S ++++E+A + C C+G+ Sbjct: 215 IRS-NNTG--RVDKVDYEGVLPRFRRLYLSRDISKLKQSLQDEIASLVHQGECPHCQGSG 271 Query: 414 LRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDR----LKF 469 L +A + + ++ G +L G+ +I + K + ++ L Sbjct: 272 LNEKALASKINGNNILHFQSLTAG---------ELLGELQRITHPVGKSLAEQMCGTLGK 322 Query: 470 LVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLG 529 + +G+NYL+++R +TLSG E QR+++ + L + Y+ DEP+ GLH D +++ Sbjct: 323 MAEIGINYLSMNRPTDTLSGEELQRLKMVRHLDGSLNNITYIFDEPTAGLHPADAQKIGR 382 Query: 530 TLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTG 589 L LRD N V+VVEH+ I AD ++++G AG GG++V +G + + E+LT Sbjct: 383 ILQQLRDRHNNVLVVEHNRQMIELADEIVELGERAGSQGGKIVYQGDIHKLRQA-ETLTA 441 Query: 590 QYMSGKRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTL 649 + + K ++ + P + L + +NLK+V+ +P G+ T I+GV+GSGKS+L Sbjct: 442 KMLMEKVRLNL----APLAWTESFALENIKLHNLKNVSTVIPKGVLTAISGVAGSGKSSL 497 Query: 650 INDTLFPIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFT 709 + + + + IDQ PIG + RS PATYTGV Sbjct: 498 AQAFV-------------------------RRYSEAVFIDQKPIGTSVRSTPATYTGVMD 532 Query: 710 PVRELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGK 769 +R+LFA +A G FSFN +GG C C+G G I +M F + V C++C G+ Sbjct: 533 DIRKLFA-----KANGTDASMFSFNAKGG-CPVCKGTGQISYDMAFAEPVVVQCEECGGR 586 Query: 770 RYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATT 829 RY+R L Y+GK I +VL +TIE+A EFFD P + + LQ+L+DVGL Y+ LGQ +T Sbjct: 587 RYSRTALSFHYQGKNIEDVLALTIEQAAEFFDN-PKICKALQSLLDVGLGYLTLGQPTST 645 Query: 830 LSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIE 889 LSGGE QRVKLA EL + G +Y+LDEP+TGLH D QLL +L +L GNT++++E Sbjct: 646 LSGGEVQRVKLAAELQQSGK---IYVLDEPSTGLHQNDAMQLLSLLRQLVKNGNTVIIVE 702 Query: 890 HNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFL 936 H L++I ADW++D+G GGS GG+++ +GT + C+ S TA+FL Sbjct: 703 HRLELIAAADWVIDMGEGGGSAGGKVMFAGTVAELLNCKRSKTAKFL 749 Score = 114 bits (284), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 55/117 (47%), Positives = 77/117 (65%) Query: 2 DKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYA 61 D+I++ A +NLK+I L +P+ KL+V G+SGSGKSSL FDTL E R++ Y Sbjct: 4 DQIQIIDAHENNLKHIKLTLPKGKLVVFVGVSGSGKSSLVFDTLAVESYRQWQAGYPLYL 63 Query: 62 RQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEP 118 R + E+P + I GL+PA+ +EQK+ N RSTVGT +I LRL+F+R+GEP Sbjct: 64 RNKMPHYERPKIGAIYGLTPAVVVEQKTAGANARSTVGTAVDIAPLLRLMFSRIGEP 120 Score = 111 bits (278), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 74/188 (39%), Positives = 104/188 (55%), Gaps = 17/188 (9%) Query: 406 CASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGD 465 C C G R R A + + + + ++I A EFF+N K I Sbjct: 580 CEECGGRRYSRTALSFHYQGKNIEDVLALTIEQAAEFFDNPK---------------ICK 624 Query: 466 RLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNE 525 L+ L++VGL YLTL + TLSGGE QR++LA+++ G +YVLDEPS GLHQ D Sbjct: 625 ALQSLLDVGLGYLTLGQPTSTLSGGEVQRVKLAAELQQS--GKIYVLDEPSTGLHQNDAM 682 Query: 526 RLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPE 585 +LL L L GNTVI+VEH + I AAD VID+G G G GG+V+ G + ++ Sbjct: 683 QLLSLLRQLVKNGNTVIIVEHRLELIAAADWVIDMGEGGGSAGGKVMFAGTVAELLNCKR 742 Query: 586 SLTGQYMS 593 S T ++++ Sbjct: 743 SKTAKFLA 750 Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 44/146 (30%), Positives = 67/146 (45%), Gaps = 9/146 (6%) Query: 608 NPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGA-- 665 +P+++ ++ A NNLK + LTLP G GVSGSGKS+L+ DTL + RQ Sbjct: 2 HPDQI-QIIDAHENNLKHIKLTLPKGKLVVFVGVSGSGKSSLVFDTLAVESYRQWQAGYP 60 Query: 666 -TIAEPAPYRD---IQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPES 721 + P+ + I + + ++Q G RS T + +R +F+ + E Sbjct: 61 LYLRNKMPHYERPKIGAIYGLTPAVVVEQKTAGANARSTVGTAVDIAPLLRLMFSRIGEP 120 Query: 722 RARGYTPGRFSFNVRGGRCEACQGDG 747 A G +S N G C C G G Sbjct: 121 SAGGSMA--YSPNHPLGMCPHCTGLG 144 Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 35/105 (33%), Positives = 52/105 (49%), Gaps = 31/105 (29%) Query: 10 RTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQFLSLME 69 + HNLKN++ VIP+ L ++G++GSGKSSLA A+ R++ Sbjct: 467 KLHNLKNVSTVIPKGVLTAISGVAGSGKSSLA----------------QAFVRRY----- 505 Query: 70 KPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFAR 114 S A+ I+QK + RST T T + D +R LFA+ Sbjct: 506 ----------SEAVFIDQKPIGTSVRSTPATYTGVMDDIRKLFAK 540 >UniRef50_C8PNC0 UvrABC system protein A n=4 Tax=cellular organisms RepID=C8PNC0_9SPIO Length = 860 Score = 366 bits (939), Expect = 3e-99, Method: Compositional matrix adjust. Identities = 254/773 (32%), Positives = 402/773 (52%), Gaps = 43/773 (5%) Query: 189 PPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVADMD-DPKAEELLF 247 P L L ++ I V F +L L F G+ V + P + + Sbjct: 109 PAALALHQRPGIPGVRSTFGTASELLNSLRLMFSRL-----GSHVCPNWHRTPASMAVAL 163 Query: 248 SANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPELSLAGGAI 307 CP+CG S +FN+ GACP C G G+ + D ++ + LS+ GA+ Sbjct: 164 MQPIVCPVCGESFYGPGAEAMAFNSD-GACPVCSGTGMVREVDDSTLVPDESLSIEDGAV 222 Query: 308 RGWDRRNFYYFQMLKSLADHYKFDVEAPWGSLSANVHKVVLYGS-GKENIEFKYMNDR-- 364 W + F M K++A+ ++ P+ L+ +V G K+ I + N + Sbjct: 223 LPW--KLFGLIAMPKTVAE-LGVRIDVPFSELTEEERHIVFAGEETKKMIVWHSKNGKVF 279 Query: 365 --GDTSIRRH-PFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGTRLRREARHV 421 T H E LHN+E S +++ KF+ PC C+GTRL + R Sbjct: 280 ELNCTYYNAHRAAENALHNVE-------SEKGLDKIRKFLREAPCPECKGTRLSKAVRAT 332 Query: 422 YVENTPLPAISDMSIGHAMEFFNNL--KLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLT 479 + L + +++ +++ +++ L+ + +A I+ + D + L ++GL YL+ Sbjct: 333 TLAGKNLAEATALTLDELLQWVDSVPATLSPEMRPMALSIIGSLADNARRLKDLGLGYLS 392 Query: 480 LSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGN 539 L R++ TLS GE QR++LA + +GV+YVLDEPSIGLH + + L+ + L GN Sbjct: 393 LDRASSTLSTGERQRVQLARAVRNETLGVLYVLDEPSIGLHPSNIDGLMEVVNSLIADGN 452 Query: 540 TVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKI- 598 +V++V+HD ++ AD++I++GP AG GG V+A+G +E I P S +++ + Sbjct: 453 SVVLVDHDVHVLKRADYIIEMGPLAGNEGGTVIAQGSVEEIAQNPASKIAGFITETETVL 512 Query: 599 ---EVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLF 655 KK + AN + L + + + + + +P G T +TGVSGSGK+TL+ + L Sbjct: 513 TRKRAAKKDLFAN--GTIHLETEQIHTVHALKVDIPKGRLTAVTGVSGSGKTTLVLENLI 570 Query: 656 PIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELF 715 P Q G + P+ E +V ID +PIG RS ATY+G+ +R+LF Sbjct: 571 PALQAAAGGNKV---PPHVSKISAEGITRVNLIDAAPIGINVRSTIATYSGISDDLRKLF 627 Query: 716 AGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRET 775 AG ++ + T FS+N RC C G G I +++ FLPD+ + C C G R+ +E Sbjct: 628 AGTKAAKEKKLTASEFSYNTGTLRCPTCDGTGQISLDVQFLPDVTITCPDCGGSRFGKEA 687 Query: 776 LEIKYKGK------TIHEVLDMTIEEAREFFDA--VPALARKLQTLMDVGLTYIRLGQSA 827 I + K ++ E++ MT+ +A F A V +A L L ++GL Y+ LG+ Sbjct: 688 ESILWTPKKSEQSYSLPELMRMTVRKALPVFSASGVHKIAENLSVLQNLGLGYLTLGEDT 747 Query: 828 TTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVV 887 LSGGEAQR+KLA E+ K +++ DEPT GLH D+Q LL V H+L + G T+VV Sbjct: 748 PALSGGEAQRLKLAAEMGKT-QNDAVFVFDEPTIGLHPLDVQVLLGVFHRLVEAGATVVV 806 Query: 888 IEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLKPML 940 IEH+LDVI +D+I+D+GP GG+ GG+I+ GTPE + + AS T R+L +L Sbjct: 807 IEHDLDVIANSDYIIDMGPGGGAAGGKIVAYGTPEEITQNPASITGRYLAEVL 859 Score = 120 bits (302), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 59/132 (44%), Positives = 88/132 (66%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 63 I ++GAR HNLKNI++ IP + L+ + G+SGSGKSSLA TLYAEG RRY+E+LS Y R+ Sbjct: 33 ISIKGARVHNLKNIDVDIPLEMLVAIAGVSGSGKSSLALGTLYAEGSRRYLEALSTYTRR 92 Query: 64 FLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCPDH 123 ++ + D+D I + A+++ Q+ RST GT +E+ + LRL+F+R+G CP+ Sbjct: 93 RITQSGRADIDEIHHIPAALALHQRPGIPGVRSTFGTASELLNSLRLMFSRLGSHVCPNW 152 Query: 124 DVPLAAQTVSQM 135 A+ V+ M Sbjct: 153 HRTPASMAVALM 164 Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust. Identities = 44/171 (25%), Positives = 70/171 (40%), Gaps = 34/171 (19%) Query: 613 LKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIA---- 668 + + GAR +NLK++ + +P+ + I GVSGSGKS+L TL+ R+ A Sbjct: 33 ISIKGARVHNLKNIDVDIPLEMLVAIAGVSGSGKSSLALGTLYAEGSRRYLEALSTYTRR 92 Query: 669 --EPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGV-------- 718 + DI + H + + Q P RS T + + +R +F+ + Sbjct: 93 RITQSGRADIDEIHHIPAALALHQRPGIPGVRSTFGTASELLNSLRLMFSRLGSHVCPNW 152 Query: 719 ---PESRARG--------------YTPG--RFSFNVRGGRCEACQGDGVIK 750 P S A Y PG +FN G C C G G+++ Sbjct: 153 HRTPASMAVALMQPIVCPVCGESFYGPGAEAMAFNSDGA-CPVCSGTGMVR 202 Score = 44.7 bits (104), Expect = 0.020, Method: Compositional matrix adjust. Identities = 36/112 (32%), Positives = 54/112 (48%), Gaps = 13/112 (11%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 63 I + + H + + + IP+ +L VTG+SGSGK++L + L + +L A A Sbjct: 528 IHLETEQIHTVHALKVDIPKGRLTAVTGVSGSGKTTLVLENL--------IPALQAAAG- 578 Query: 64 FLSLMEKPDVDHI--EGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFA 113 P V I EG++ I+ N RST+ T + I D LR LFA Sbjct: 579 --GNKVPPHVSKISAEGITRVNLIDAAPIGINVRSTIATYSGISDDLRKLFA 628 >UniRef50_B9XUD5 Putative uncharacterized protein n=2 Tax=Helicobacter pylori RepID=B9XUD5_HELPY Length = 467 Score = 365 bits (937), Expect = 4e-99, Method: Compositional matrix adjust. Identities = 208/482 (43%), Positives = 293/482 (60%), Gaps = 23/482 (4%) Query: 1 MDKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAY 60 MDKI ++GAR +NLKNI L IP+++ +V TGLSGSGKS+LAFDTLYAEGQRRY+ESLS+Y Sbjct: 1 MDKIIIQGARENNLKNIFLEIPKNQFVVFTGLSGSGKSTLAFDTLYAEGQRRYLESLSSY 60 Query: 61 ARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRC 120 ARQFL + KP+VD IEGL+PAI+I+QK+TS NPRSTVGTITEI+DYLRLLFAR+GE C Sbjct: 61 ARQFLDKVGKPNVDKIEGLTPAIAIDQKTTSKNPRSTVGTITEIYDYLRLLFARIGEQFC 120 Query: 121 PDHDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARID 180 P P+++ S ++ + E ++++LAPIIK++KG LE+L +GY+RA +D Sbjct: 121 PTCLEPISSMNASDIISQICHLEENSKIIILAPIIKDKKGSFNDKLESLRLKGYVRAFVD 180 Query: 181 GEVCDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVADM-DD 239 G + L + L KKHTIE VVDR + + + R+A + E AL+ S G V + D+ Sbjct: 181 GVMVRLDEEIHLHKTKKHTIEAVVDRVVINSENSSRIASTIEKALKESYGELEVEILQDN 240 Query: 240 PKAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPE 299 + +S + AC C S ELEP FSFN+P GAC +C GLG + D +++ +P Sbjct: 241 APSIRKHYSEHKACFKCKMSFEELEPLSFSFNSPKGACESCLGLGTKFSLDISKIL-DPN 299 Query: 300 LSLAGGAIR---GWDRRNFYYFQMLKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKENI 356 L GAI+ G++R YY QM + ++ D + L+ +LYG+G E I Sbjct: 300 TPLNQGAIKVIFGYNRS--YYAQMFEGFCEYNGIDTALCFNELNKEQQDALLYGNGTE-I 356 Query: 357 EFKYMNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGTRLRR 416 F + N S + P++G++ +KE +++L+ ++S + C+SCEG RL+ Sbjct: 357 SFHFKN-----SPLKRPWKGIIQIAYDMFKE------QKDLSDYMSEKTCSSCEGHRLKA 405 Query: 417 EARHVYVENTPLPAISDMSIGHAMEFFNN----LKLAGQRAKIAEKILKEIGDRLKFLVN 472 + V V + I FFN+ L Q KIAE ILKEI +R+ F Sbjct: 406 SSLSVQVAGLKMADFLTKPIEEVYHFFNDPTHFSYLNEQEKKIAEPILKEILERVFFYTM 465 Query: 473 VG 474 G Sbjct: 466 WG 467 Score = 72.4 bits (176), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 43/112 (38%), Positives = 60/112 (53%), Gaps = 6/112 (5%) Query: 615 LTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAEPAPYR 674 + GAR NNLK++ L +P F TG+SGSGKSTL DTL+ QR+ + + + Sbjct: 6 IQGARENNLKNIFLEIPKNQFVVFTGLSGSGKSTLAFDTLYAEGQRRYLESLSSYARQFL 65 Query: 675 DIQGLEHFDKV------IDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPE 720 D G + DK+ I IDQ + PRS T T ++ +R LFA + E Sbjct: 66 DKVGKPNVDKIEGLTPAIAIDQKTTSKNPRSTVGTITEIYDYLRLLFARIGE 117 >UniRef50_C1ZJW2 Excinuclease ATPase subunit n=1 Tax=Planctomyces limnophilus DSM 3776 RepID=C1ZJW2_PLALI Length = 898 Score = 362 bits (928), Expect = 5e-98, Method: Compositional matrix adjust. Identities = 222/595 (37%), Positives = 331/595 (55%), Gaps = 39/595 (6%) Query: 382 ERRYKETESSAVREELAKFISNRPCASCEGTRLRREARHVYVENTPLPAISDMSIGHAME 441 +R+ K + + +A+ +S+ CA C+G+RL ARH + E LP +++ A++ Sbjct: 299 KRQQKSASKAQSQRAVAQVVSSEKCAECQGSRLGEVARHTFWEKRILPDWLKLNVDDALK 358 Query: 442 FFNNLKLAGQRAKIAEK-----------ILKEIGDRLKFLVNVGLNYLTLSRSAETLSGG 490 ++ A Q+ + E+ ++ EI RL L +GL YLTL RSA+TLSGG Sbjct: 359 AMRQIETAWQQEALPERRSTHQGLLRQNLIPEIIRRLDGLQRLGLGYLTLDRSAQTLSGG 418 Query: 491 EAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDA 550 E R RLA+ I + G +VLDEPS GLH+ D R+ L LRD+GNTV+VVEH+ D Sbjct: 419 ELTRSRLATLIASQRKGYCFVLDEPSSGLHRADLYRVKNALNALRDVGNTVVVVEHEVDL 478 Query: 551 IRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKI----EVPKKRV- 605 ++ AD ++++GPGAG GG++V G A PES+ G ++ G R++ + P R Sbjct: 479 LQGADWLVELGPGAGHLGGKLVTAGTPRATAEAPESVIGPWLKGCRQLIRATDSPDDRQH 538 Query: 606 ------PANPEKVL---------KLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLI 650 A PE ++ + R N+ L L +G C TGVSGSGK+T + Sbjct: 539 DQSSINKALPESIILGSCDAGFITIPPIRVRNVHVPALKLGMGQVVCFTGVSGSGKTTWL 598 Query: 651 NDTLFPIAQRQLNG-------ATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPAT 703 + + P Q+ LN T+A + +V+ I QSP+GR +S P T Sbjct: 599 MEGILPALQQALNARHQRPGSKTLASGDRSLMATIPDELIEVVTIGQSPVGRGWKSFPMT 658 Query: 704 YTGVFTPVRELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPC 763 G++ VR+++A +++ RG+TP RFS RC C G G + +E FLPD C Sbjct: 659 VAGLWDLVRKIYAATKDAKLRGFTPARFSPWHPEARCPVCLGQGEVTLEADFLPDWKTTC 718 Query: 764 DQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRL 823 + C G R+N TL I+++GK++ +VL M EA EFF LAR L ++GL Y++L Sbjct: 719 ETCAGDRFNPATLAIRFRGKSLGDVLRMEFSEAAEFFANFERLARPLHLFCELGLGYLKL 778 Query: 824 GQSATTLSGGEAQRVKLARELSKRG-TGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQG 882 GQ T+S GEAQR++LA L++ GQ + LDEPTTGLH AD++ LL V +L G Sbjct: 779 GQPMRTVSTGEAQRIRLASYLARPDFQGQRCFALDEPTTGLHPADVKALLKVFDRLVAAG 838 Query: 883 NTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLK 937 + ++V+EH+LDVI+ A I+DLGP G GG+++ G + + AS T + L+ Sbjct: 839 HLLLVVEHHLDVIRAAHQILDLGPGAGQQGGQLVAWGNQHDLRQNPASLTGQALR 893 Score = 206 bits (523), Expect = 5e-51, Method: Compositional matrix adjust. Identities = 116/283 (40%), Positives = 167/283 (59%), Gaps = 4/283 (1%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 63 I +RGARTHNL+N+ L +P KL+ VTG+SGSGK+SLA DTL+ EGQRRY+E+L+ R+ Sbjct: 10 IRIRGARTHNLQNLTLDLPLGKLVGVTGISGSGKTSLALDTLFVEGQRRYLETLNPQIRR 69 Query: 64 FLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCPDH 123 L DVD I+GL P I ++ ++ S PR+T+ T+TEIHD LR+++ R G CP Sbjct: 70 QLRRQSWADVDEIQGLPPTICLDSRTLSVGPRATLATLTEIHDLLRVVYFRAGVLHCPSC 129 Query: 124 DVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARIDGEV 183 + T +++D++++ PE +L LLA + + L +A G++RARI+G++ Sbjct: 130 QSIVEQSTHDEILDDLVALPERTKLQLLAKVDDDPGISPQDRLRQIAQSGFVRARINGKL 189 Query: 184 CDLSDPPKL-ELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVADMDDPKA 242 D SD L E + IE VVDR ++D + RLAES + AL L G +V P Sbjct: 190 IDTSDVFVLPEDAPRPVIEAVVDRVIIKDGIRSRLAESLDVALRLGHGCCLVTIDGAPDR 249 Query: 243 EELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGV 285 ++ C C S + + R FS + AGACP C LGV Sbjct: 250 H---YATIRFCGPCHRSFADPQLRTFSHFSAAGACPACLALGV 289 Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 42/120 (35%), Positives = 65/120 (54%), Gaps = 20/120 (16%) Query: 613 LKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLF------------PIAQR 660 +++ GAR +NL+++TL LP+G +TG+SGSGK++L DTLF P +R Sbjct: 10 IRIRGARTHNLQNLTLDLPLGKLVGVTGISGSGKTSLALDTLFVEGQRRYLETLNPQIRR 69 Query: 661 QLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELF--AGV 718 QL + A+ +IQGL I +D + PR+ AT T + +R ++ AGV Sbjct: 70 QLRRQSWAD---VDEIQGLP---PTICLDSRTLSVGPRATLATLTEIHDLLRVVYFRAGV 123 >UniRef50_Q49WT2 Excinuclease ATPase subunit n=16 Tax=Staphylococcaceae RepID=Q49WT2_STAS1 Length = 753 Score = 359 bits (922), Expect = 3e-97, Method: Compositional matrix adjust. Identities = 234/713 (32%), Positives = 357/713 (50%), Gaps = 68/713 (9%) Query: 232 AVVADMDDPKAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDP 291 + V + D A L + P GYS FSFN+P G C TC+GLG + + Sbjct: 96 STVGTVSDIYASVRLLWSRIGEPFVGYS------DAFSFNSPNGMCETCEGLGYIEDINL 149 Query: 292 DRVIQNPELSLAGGAIRGWDRRNFYYFQMLKSLADHYK----FDVEAPWGSLSANVHKVV 347 + ++ + SL GAI NF F K Y+ FD + + + + Sbjct: 150 NELL-DWNKSLNEGAI------NFPSFGPDKERGKAYRDSGLFDNDKKLKAYTKEELDLF 202 Query: 348 LYGSGKENIEFKYMNDRGDTSIRRHPFEGVLHNMERRY---KETESSAVREELAKFISNR 404 LY +E I+ K + S + + G++ R + KE + L + N+ Sbjct: 203 LY---QEPIKLKKPPEEWRKSAK---YVGLIPRFRRIFLGDKEFNKKRYAKHLKNVVENK 256 Query: 405 PCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIG 464 C +C G RL + + + + M++ + F N L A+ I++ + Sbjct: 257 VCPTCNGQRLNSKILSCKIMGKNISDFTQMTVKENLAFLNKL-----NNSTAQFIIEPLR 311 Query: 465 DRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDN 524 +L+ L +GL+YLTL R +LSGGEAQR++L + + L ++Y++DEPS+GLH D Sbjct: 312 KQLEALDYIGLSYLTLDRVTTSLSGGEAQRLKLIRHLNSSLSDLVYIIDEPSVGLHPEDI 371 Query: 525 ERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVP 584 ++ L L+ GNTV++VEHD D I+ AD++ID+GP +G GGE+ +G + +++ Sbjct: 372 AKINEILKSLKHKGNTVLIVEHDPDVIKEADYIIDMGPSSGAQGGEITFKGTYKKLLSSD 431 Query: 585 ESLTGQYMSGKRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGS 644 S TG+ + K + K + L NNL +VT+ +P + T +TGV+GS Sbjct: 432 TS-TGEALRIKHHL----KNEIREAKSFYHLGPVTQNNLNNVTVDIPKHVLTVLTGVAGS 486 Query: 645 GKSTLINDTLFPIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATY 704 GKS+L+ G D + +DQ I + RSN TY Sbjct: 487 GKSSLVK-------------------------AGFAKNDNAVFMDQKAIQGSDRSNLLTY 521 Query: 705 TGVFTPVRELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCD 764 GVF VR F S+ G FS+N +G C C G G I+ E+ F+ + C+ Sbjct: 522 LGVFDRVRNFF-----SKETGLNKSMFSYNSKGA-CPNCGGKGYIETELAFMGEFSQTCE 575 Query: 765 QCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLG 824 C GKRY E L G +I + L++T++E FFD + KLQ + GL Y+ LG Sbjct: 576 VCHGKRYKPEVLNATIDGYSIADFLELTVDEGIRFFDKENEIQSKLQAISKTGLNYVTLG 635 Query: 825 QSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNT 884 Q +TLSGGE QRVKL + L+ T +++I DEPTTGLH ADI L++ + L +Q NT Sbjct: 636 QPLSTLSGGEIQRVKLGQYLNDDVT-DSIFIFDEPTTGLHEADIPILINCFNDLIEQNNT 694 Query: 885 IVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLK 937 +++IEHNL ++ ADWI+D+GP G GG+I SG P + + T++ LK Sbjct: 695 VILIEHNLSIMCDADWIIDVGPGPGLDGGKIQFSGYPINFVKENKTLTSKHLK 747 Score = 108 bits (269), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 56/118 (47%), Positives = 81/118 (68%) Query: 1 MDKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAY 60 M+ I + GA +NLKNIN+ IP+ + V TG SGSGKSSL F T+ AE ++ ES S+Y Sbjct: 1 MNDITIIGASQNNLKNINITIPKHLVTVFTGRSGSGKSSLVFRTIAAESEQLLNESYSSY 60 Query: 61 ARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEP 118 + L+ KP V+ I+ L A++I QK + N RSTVGT+++I+ +RLL++R+GEP Sbjct: 61 IQFHLNKQPKPKVNAIKNLPVAMTISQKRFNGNSRSTVGTVSDIYASVRLLWSRIGEP 118 Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 46/146 (31%), Positives = 75/146 (51%), Gaps = 12/146 (8%) Query: 613 LKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIA---- 668 + + GA NNLK++ +T+P L T TG SGSGKS+L+ T+ +++ LN + + Sbjct: 4 ITIIGASQNNLKNINITIPKHLVTVFTGRSGSGKSSLVFRTIAAESEQLLNESYSSYIQF 63 Query: 669 ----EPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESRAR 724 +P P + +++ + I Q RS T + ++ VR L++ + E Sbjct: 64 HLNKQPKP--KVNAIKNLPVAMTISQKRFNGNSRSTVGTVSDIYASVRLLWSRIGEPFV- 120 Query: 725 GYTPGRFSFNVRGGRCEACQGDGVIK 750 GY+ FSFN G CE C+G G I+ Sbjct: 121 GYSDA-FSFNSPNGMCETCEGLGYIE 145 >UniRef50_Q6A9D4 UvrA-like ABC transporter n=2 Tax=Propionibacterium acnes RepID=Q6A9D4_PROAC Length = 779 Score = 353 bits (906), Expect = 2e-95, Method: Compositional matrix adjust. Identities = 242/709 (34%), Positives = 373/709 (52%), Gaps = 76/709 (10%) Query: 245 LLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPELSLAG 304 LLFS + P GYS +S N+P G C C GLG D +I P+ SL Sbjct: 122 LLFSRS-GSPSAGYSPS------YSPNDPRGMCMDCSGLGYVDDIDLQELIA-PDRSLNE 173 Query: 305 GAIRGWDRRNFYYFQ----MLKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKENIEFKY 360 GA+R F F+ K L FD + PW L K++L+G G Sbjct: 174 GAVR------FPSFEPGTYRWKRLVCSGLFDPDVPWKELPEASRKLLLHGQG-------V 220 Query: 361 MNDRGDTSIRRHP-FEGVLHNMERRYKETESSAVREE----LAKFISNRPCASCEGTRLR 415 +R T +H F+G++ ++ Y E ++ E+ L + + C C G R+ Sbjct: 221 RLERPLTGYPKHGIFDGIIPRLKASYLEKANAKTTEKEDAALRRIVKRVVCPHCHGQRIN 280 Query: 416 REARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNVGL 475 AR +E + S +SI + F + +I E + + RL + ++GL Sbjct: 281 EAARASRIEGLNIAEASHLSIDECIAFIKTIT-----DEITEAPRQAVLARLNNMRDIGL 335 Query: 476 NYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLR 535 YL+L R +TLSGGEAQR+RL S + A + +V+DEPS GLH D ERLL +L LR Sbjct: 336 GYLSLDRPTDTLSGGEAQRLRLVSLLDAPITDATFVMDEPSSGLHPADIERLLRSLRKLR 395 Query: 536 DLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGK 595 D GNTVI+VEH+ + A DHV+++GPGAG GG V+ EG ++ ++ TG+ + + Sbjct: 396 DSGNTVIIVEHNLQVLAACDHVVELGPGAGDDGGRVLFEGSPRSLTR-SDTPTGKAL--R 452 Query: 596 RKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLF 655 I++ ++ PA V+++T AR NNL DV+++ PVG T ++GV+GSGKS+L Sbjct: 453 AGIQLNRRSRPAT--DVIEVTHARCNNLGDVSVSFPVGALTVVSGVAGSGKSSL------ 504 Query: 656 PIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELF 715 + +A+ P +V IDQ P+ + RS+ T G+ +P+RE F Sbjct: 505 --------ASALAQQHP-----------EVTIIDQLPLAASSRSSILTALGLESPIREAF 545 Query: 716 AGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRET 775 S+ G T FS N +G C C+G G V+M F+ D+ PC++C G+++N T Sbjct: 546 -----SKISGLTTSWFSANEKGA-CPLCKGRGTTHVDMAFMDDVQTPCERCGGRKFNETT 599 Query: 776 LEIKYK----GKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLS 831 + ++ TI +VLD + + E + + + L VGL Y+ LG++ TLS Sbjct: 600 MAVRLPMGSLNPTIADVLDSGLNQVSELYATQDDVLTVISLLQQVGLGYLTLGRTLNTLS 659 Query: 832 GGEAQRVKLARELSK-RGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEH 890 GGE QR+KL + L + R +++ +LDE TTGLH D++QL+ L +L ++G T + I+H Sbjct: 660 GGELQRIKLVQFLKEHREEQESVLVLDEITTGLHPKDVEQLIQFLRRLSERGATAIAIDH 719 Query: 891 NLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLKPM 939 N +I AD+ +DLGP + GG ++ SGT + +A+C S T ++L + Sbjct: 720 NPGLISQADYNIDLGPGAEAAGGTVVFSGTAQGLADCPESTTGKWLHKL 768 Score = 87.0 bits (214), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 49/117 (41%), Positives = 74/117 (63%), Gaps = 3/117 (2%) Query: 3 KIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESL-SAYA 61 I++ GA+THNL+++ + IP+ L+ V G+SGSGK+SL + A G ++ V SL A+ Sbjct: 16 SIQIHGAKTHNLRDVTVCIPKHALVGVAGVSGSGKTSLV--STLAVGAQQAVSSLFPAFV 73 Query: 62 RQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEP 118 + L+ +E VD ++GL+ + QK S N RS+V T + I YLRLLF+R G P Sbjct: 74 QARLNTLEPGLVDGLQGLTFTAIVGQKKFSRNARSSVSTASGIAPYLRLLFSRSGSP 130 Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 49/150 (32%), Positives = 77/150 (51%), Gaps = 23/150 (15%) Query: 613 LKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLIN----------DTLFP-IAQRQ 661 +++ GA+ +NL+DVT+ +P + GVSGSGK++L++ +LFP Q + Sbjct: 17 IQIHGAKTHNLRDVTVCIPKHALVGVAGVSGSGKTSLVSTLAVGAQQAVSSLFPAFVQAR 76 Query: 662 LNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELF--AGVP 719 LN EP +QGL F + + Q R RS+ +T +G+ +R LF +G P Sbjct: 77 LN---TLEPGLVDGLQGLT-FTAI--VGQKKFSRNARSSVSTASGIAPYLRLLFSRSGSP 130 Query: 720 ESRARGYTPGRFSFNVRGGRCEACQGDGVI 749 + GY+P +S N G C C G G + Sbjct: 131 SA---GYSPS-YSPNDPRGMCMDCSGLGYV 156 >UniRef50_B4CXL9 ABC transporter-related protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CXL9_9BACT Length = 755 Score = 352 bits (904), Expect = 3e-95, Method: Compositional matrix adjust. Identities = 232/699 (33%), Positives = 358/699 (51%), Gaps = 71/699 (10%) Query: 245 LLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPELSLAG 304 LLF A A P+ L+ FSFN+P GACP C GLG DP+R+ + SL Sbjct: 115 LLF-ARAAVPV-------LDASAFSFNSPEGACPACRGLGQILTPDPERLFDLSK-SLGE 165 Query: 305 GAIR--GWDRRNFYYFQMLKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKENIEFKYMN 362 GAIR W + Y+ ++K A + F+++AP G +++ + E + Sbjct: 166 GAIRHRAW-KVGGRYWNIIK--ATEF-FEMDAPLGQWPKEKLDHLMHAAPAE------VA 215 Query: 363 DRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGTRLRREARHVY 422 +R ++R FEGV+ + R + + A+F + + CA+C GTRL++ A Sbjct: 216 NRVPGFVQRFTFEGVVERLRERLADDRGLDSADYDAQFFTTQWCATCGGTRLQQRALACR 275 Query: 423 VENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTLSR 482 + + + +++ F +L+++ ++ + L+ L V L+YLTL R Sbjct: 276 LNGLNIADAAGLAVPELKNFVRSLEMS-----TLATVVDSLSRILENLEMVELSYLTLDR 330 Query: 483 SAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVI 542 T+SGGE QRI++A ++G+ L+G++Y+LDEPS GLH ++ E + + L++ GNT++ Sbjct: 331 PITTVSGGEMQRIKIARELGSRLMGILYILDEPSRGLHAKNVEAVNSIITKLKERGNTIL 390 Query: 543 VVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEVPK 602 VEH+ + AD+++++GPGAG GG++ G P R + K Sbjct: 391 SVEHNRAVVELADNIVELGPGAGSRGGQITETG-------TPADFKNSSGPTGRLLSAAK 443 Query: 603 KRVPANPEKVLK----LTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIA 658 + + P K + R NNLK L +P TC+ GVSG+GKS+L+ + Sbjct: 444 QHISPPPPKAFTEWHFFSDLRRNNLKIEKLKIPRAALTCLVGVSGAGKSSLLEEM----- 498 Query: 659 QRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGV 718 + +PA R + Q IG + RSN TY F +R LFA Sbjct: 499 -------QLRDPASVR-------------VAQRQIGASVRSNVCTYLNFFDEIRNLFAKK 538 Query: 719 PESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEI 778 + A F+FN G C C G G I +++HFL PC C GKRY E L Sbjct: 539 ANASA-----SLFAFNSDGA-CPECGGRGSITLDLHFLGSAMAPCRTCNGKRYRAEVLGY 592 Query: 779 KYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRV 838 ++ + I EVL++ +EEA FF + L+ L+ GL YIRLGQS T SGGE QRV Sbjct: 593 TWQDRNISEVLELPVEEAATFFREGKKIRSALELLLGCGLGYIRLGQSLDTFSGGELQRV 652 Query: 839 KLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTA 898 KL L+ LY+LDEP+ GLH DI++++ +L L +G T+V EH+LD++ A Sbjct: 653 KLIYGLND---PTALYLLDEPSRGLHPDDIERIVSLLRTLTARGKTVVASEHSLDLVARA 709 Query: 899 DWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLK 937 DW+V+LGP + GG+++ +GT + S TA++LK Sbjct: 710 DWVVELGPGAANAGGKVIAAGTVREIIRATTSITAQYLK 748 Score = 115 bits (289), Expect = 7e-24, Method: Compositional matrix adjust. Identities = 57/117 (48%), Positives = 76/117 (64%) Query: 2 DKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYA 61 D++ V G R HNLK++++ IP + V TG+SG GKSSL FD +YA + ++SLS YA Sbjct: 7 DQLSVTGVRLHNLKSVSVSIPHFRHTVCTGVSGCGKSSLVFDCIYALCEYELLQSLSTYA 66 Query: 62 RQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEP 118 R + L PDV+H GL P + I+Q NPRST+GT TE + +LRLLFAR P Sbjct: 67 RGAIPLPVVPDVEHASGLLPPVVIDQADLGRNPRSTIGTSTEAYTFLRLLFARAAVP 123 Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 56/145 (38%), Positives = 80/145 (55%), Gaps = 13/145 (8%) Query: 613 LKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQL--NGATIAEP 670 L +TG R +NLK V++++P T TGVSG GKS+L+ D ++ + + +L + +T A Sbjct: 9 LSVTGVRLHNLKSVSVSIPHFRHTVCTGVSGCGKSSLVFDCIYALCEYELLQSLSTYARG 68 Query: 671 A-PYRDIQGLEHFDKVID---IDQSPIGRTPRSNPATYTGVFTPVRELF--AGVPESRAR 724 A P + +EH ++ IDQ+ +GR PRS T T +T +R LF A VP A Sbjct: 69 AIPLPVVPDVEHASGLLPPVVIDQADLGRNPRSTIGTSTEAYTFLRLLFARAAVPVLDAS 128 Query: 725 GYTPGRFSFNVRGGRCEACQGDGVI 749 FSFN G C AC+G G I Sbjct: 129 A-----FSFNSPEGACPACRGLGQI 148 >UniRef50_UPI0001BC2CF0 putative excinuclease ABC subunit A n=1 Tax=Brevibacterium linens BL2 RepID=UPI0001BC2CF0 Length = 849 Score = 342 bits (878), Expect = 3e-92, Method: Compositional matrix adjust. Identities = 246/723 (34%), Positives = 369/723 (51%), Gaps = 80/723 (11%) Query: 268 FSFNNPAGACPTCDGLGVQQYFDPDRVIQNPELSLAGGAIR----GWDRRNFYYFQMLKS 323 FS N GACPTC G D D + + L++ GAI GW RNF K Sbjct: 133 FSPNTVEGACPTCAAKGRIHEIDLDAAVPDDSLTIREGAIAAWPGGWLGRNF------KH 186 Query: 324 LADHYKFDVEAPWGSLSANVHKVVLYGSGKENIEFKYMNDRGDTSIRRHPFEGVLHNMER 383 L + D++ W +L A +L ++ + E +L ++ R Sbjct: 187 LVETMGIDIDVAWKTLPAETRTWLLTTEDTPSVTVEP--------------EKILDHVAR 232 Query: 384 RYK---------------ETESSAVREELAKFISNRPCASCEGTRLRREARHVYVENTPL 428 Y T S+ +RE +F+SN C C G+R+ A V + + Sbjct: 233 EYTGKFRSARRYLLDTMVTTSSATIRERTEEFLSNDLCPDCHGSRINPAALAVTIGGANI 292 Query: 429 PAISDMSIGHAMEFFN-------------NLKLAGQRAKIAEKILKEIGDRLKFLVNVGL 475 + D S+ N + + + + A +L E+ R + +G+ Sbjct: 293 AEVGDHSLTDLAVTINAAIAADLERGPSESKRFSAATDEAAHVLLDELDKRTDVIERLGV 352 Query: 476 NYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLR 535 YL RSA TLS GE QR+RLA+ + +GL G++YV DE S GLH +D + L + LR Sbjct: 353 GYLPPKRSAATLSPGELQRLRLAAHLHSGLHGMVYVFDELSTGLHPKDTDHLFTHIEALR 412 Query: 536 DLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGK 595 D GNTVI+VEHD + +R D VI++GPG G GG+++ GP V E+L G+ + Sbjct: 413 DAGNTVILVEHDMEIVRRCDWVIELGPGGGARGGQLMFSGP------VAEALDGESSTAV 466 Query: 596 R-KIEVPKK--RVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLIND 652 R + E P + R P E + T NNL+ + L+ P+G T +TGVSG+GKS+++ Sbjct: 467 RLRNEAPSEPWRAPQEFEDWARCTSLSANNLRGLALSFPIGGLTTLTGVSGAGKSSVLR- 525 Query: 653 TLFPIAQRQLNGATIAEPAPYR-----------------DIQGLEHFDKVIDIDQSPIGR 695 ++ +A+ E P D GLE FD+V+ DQS IGR Sbjct: 526 SVATLARSAGASPFDGEEEPSTISRRSGSGGEGGDLAEADAAGLEVFDRVVSFDQSTIGR 585 Query: 696 TPRSNPATYTGVFTPVRELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHF 755 +PRS TY G+F +R LFA +R+RG+T +FSFN GRC C+G G+I +++ Sbjct: 586 SPRSVIGTYLGIFDKIRSLFAKTDLARSRGFTASQFSFNTARGRCPRCEGLGIITIDLVH 645 Query: 756 LPDIYVPCDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMD 815 LP C +C+G+R+ ETLE+ + TI +VLD++I+ A F L + L Sbjct: 646 LPASSGTCPECEGRRFIEETLEVTVEELTIADVLDLSIDAAATVFAERLGLVAHFEVLQR 705 Query: 816 VGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQ-TLYILDEPTTGLHFADIQQLLDV 874 VGL + LGQS+ TLSGGEAQR++LA + R + +L+ILDEP GLH +D + L + Sbjct: 706 VGLGGLLLGQSSATLSGGEAQRLRLAAVMRARKRRERSLFILDEPANGLHPSDARVLGQL 765 Query: 875 LHKLRDQGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTAR 934 ++ D+G+TI++ +HN+++ +DW++D+GP G GG+I+ +GTP VA TA Sbjct: 766 FRQIVDEGDTILIADHNMELAAGSDWLIDMGPGPGPDGGQIVAAGTPLQVATAGVGATAE 825 Query: 935 FLK 937 L Sbjct: 826 VLS 828 Score = 117 bits (294), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 55/116 (47%), Positives = 82/116 (70%) Query: 2 DKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYA 61 ++I + GAR HNL ++ +P +LI + G+SGSGKSSLAFDT+YAE QRRY+ES+S + Sbjct: 5 EQIGIVGAREHNLSGFSVSLPHRQLIGICGVSGSGKSSLAFDTIYAEAQRRYLESVSPFT 64 Query: 62 RQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGE 117 R L + P VD I GL AI+++Q ++ S+VGT++++ D LR+LF+R G+ Sbjct: 65 RHLLGAVSAPQVDRITGLPAAIAVKQLVSTPPENSSVGTLSQVSDLLRVLFSRFGD 120 Score = 45.4 bits (106), Expect = 0.011, Method: Compositional matrix adjust. Identities = 49/152 (32%), Positives = 67/152 (44%), Gaps = 22/152 (14%) Query: 613 LKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQ----------- 661 + + GAR +NL +++LP I GVSGSGKS+L DT++ AQR+ Sbjct: 7 IGIVGAREHNLSGFSVSLPHRQLIGICGVSGSGKSSLAFDTIYAEAQRRYLESVSPFTRH 66 Query: 662 LNGATIAEPAPYRD-IQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFA---G 717 L GA AP D I GL V + +P S+ T + V +R LF+ Sbjct: 67 LLGAV---SAPQVDRITGLPAAIAVKQLVSTP---PENSSVGTLSQVSDLLRVLFSRFGD 120 Query: 718 VPESRARGYTPGRFSFNVRGGRCEACQGDGVI 749 P ++ R FS N G C C G I Sbjct: 121 YPANQGR-LLASAFSPNTVEGACPTCAAKGRI 151 >UniRef50_C8NMU6 Excinuclease ABC, A subunit n=91 Tax=Bacteria RepID=C8NMU6_COREF Length = 779 Score = 336 bits (862), Expect = 2e-90, Method: Compositional matrix adjust. Identities = 229/667 (34%), Positives = 348/667 (52%), Gaps = 80/667 (11%) Query: 270 FNNPAGACPTCDGLGVQQYFDPDRVIQNPELSLAGGA-------IRGWDRRNFYYFQMLK 322 F G CP C+G+G D +++ + LSL GA + W R + Sbjct: 157 FTRTGGMCPRCEGMGRVSEIDRAQLV-DESLSLNDGALLIPGYKVGSWSMRGY------- 208 Query: 323 SLADHYKFDVEAPWGSLSANVHKVVLYGSGKENIEFKYMNDRGDTSIRRHPFEGVLHNME 382 A+ + + P + + + LY I+F +N +EG++ + Sbjct: 209 --AESGLYPADIPVAEFT-DEQRHALYHQEPMKIKFNGINVT---------YEGLIPKIT 256 Query: 383 RRYKETESSAVREELAKFISNR----PCASCEGTRLRREARHVYVENTPLPAISDMSIGH 438 + + S +++ + +F+ C C GTRL R A + + + M + Sbjct: 257 KSMLSKDRSGMQKHIGEFVDRAVTFIACPDCGGTRLARHALESRINGKNIADLCSMEVRD 316 Query: 439 AMEFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLA 498 + + G A+ +++ + L+ V +GL YL L R TLSGGEAQR R+ Sbjct: 317 LARWID-----GVDARSVAPLMRGLSQTLENFVAIGLGYLQLDRPVATLSGGEAQRTRMV 371 Query: 499 SQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVI 558 +G+ L V YV DEP+ GLH D ERL L+ LRD GNTV+VVEH + I ADHV+ Sbjct: 372 RHLGSPLTDVTYVFDEPTAGLHAHDIERLNRLLLDLRDKGNTVLVVEHKPETIAIADHVV 431 Query: 559 DIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEVPKKRVPANPEKVLKLTGA 618 D+GPGAG GGE+ EG + + A +++TG++ + +++ + + L + GA Sbjct: 432 DLGPGAGGAGGEIQFEGTVAELEA-SDTVTGRHFHDRAELKTSARSAAGH----LPIRGA 486 Query: 619 RGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAEPAPYRDIQG 678 NNL+DV + +P+G+ T I+GV+GSGKS+L++ A RD Sbjct: 487 NRNNLRDVDVDIPLGVLTVISGVAGSGKSSLVH-------------------AIPRD--- 524 Query: 679 LEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESRARGYTPGRFSFNVRGG 738 + ++ +DQ+ I + RSNPATYTG+ +R+ FA + G P FS N GG Sbjct: 525 ----ESLVSVDQTSIQGSTRSNPATYTGMLDSIRKAFA-----KVNGVKPALFSAN-SGG 574 Query: 739 RCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEARE 798 C C G GV+ V++ + + PC+ C+G+R++ L+ G+ I EVL M EA E Sbjct: 575 ACPNCHGTGVVTVDLGMVAGVSSPCEVCEGRRFDEAVLDHHLGGRNIAEVLAMPAVEALE 634 Query: 799 FFDA----VPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLY 854 FF A +PA L+ L+ VGL Y+ LGQ +TLSGGE QR+KL L+ + T + Sbjct: 635 FFSAPESKMPAAVTILRRLVAVGLGYLTLGQPLSTLSGGERQRLKLGTHLADKAT---TF 691 Query: 855 ILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGE 914 ILDEPTTGLH AD++ LL + L D G T++V+EH+L V+ AD I+++GP GS GG+ Sbjct: 692 ILDEPTTGLHLADVRTLLSLFDSLVDAGKTVIVVEHHLAVLAHADHIIEVGPGAGSDGGQ 751 Query: 915 ILVSGTP 921 I+ GTP Sbjct: 752 IVFEGTP 758 Score = 122 bits (306), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 61/117 (52%), Positives = 82/117 (70%) Query: 2 DKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYA 61 D I V GA +NLKNI+L IP+ ++ V TG+SGSGKSSL F T+ AE QR E+ SA+ Sbjct: 8 DMIRVHGAHENNLKNISLAIPKRRVTVFTGVSGSGKSSLVFGTIAAESQRLINETYSAFV 67 Query: 62 RQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEP 118 + F+ + +PDVD +EGL+ AI + Q+S NPRSTVGT T+ LR+LF+R+ EP Sbjct: 68 QGFMPVAARPDVDLLEGLTTAIVVGQESMGANPRSTVGTATDATAMLRILFSRLAEP 124 Score = 73.6 bits (179), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 56/170 (32%), Positives = 78/170 (45%), Gaps = 31/170 (18%) Query: 607 ANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGAT 666 A+ ++++ GA NNLK+++L +P T TGVSGSGKS+L+ T+ +QR +N Sbjct: 4 ADSHDMIRVHGAHENNLKNISLAIPKRRVTVFTGVSGSGKSSLVFGTIAAESQRLINETY 63 Query: 667 IA-----EPAPYR-DIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPE 720 A P R D+ LE I + Q +G PRS T T +R LF+ + E Sbjct: 64 SAFVQGFMPVAARPDVDLLEGLTTAIVVGQESMGANPRSTVGTATDATAMLRILFSRLAE 123 Query: 721 SRARGYTPGRFSFNV-----------------------RGGRCEACQGDG 747 A G PG +SFNV GG C C+G G Sbjct: 124 PAAGG--PGAYSFNVPSISASGGVSRAGGKREKVEFTRTGGMCPRCEGMG 171 >UniRef50_B7GTR5 ABC transporter related n=26 Tax=Bacteria RepID=B7GTR5_BIFLI Length = 862 Score = 334 bits (856), Expect = 1e-89, Method: Compositional matrix adjust. Identities = 227/726 (31%), Positives = 362/726 (49%), Gaps = 49/726 (6%) Query: 251 FACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPELSLAGGAIRGW 310 C CG +FN+ AGACPTC G G+ + + ++ + + GA+ W Sbjct: 145 ITCVSCGKEFHAPGAESLAFNS-AGACPTCSGNGIVREVNRAALVPDESKRIDDGAVLPW 203 Query: 311 DRRNFYYFQMLKSLADHYKFDVEAPWGSLSANVHKVVLYGSG-KENIEFKYMNDRGDTSI 369 + ++K + P+ L+ +V G K++I +K + Sbjct: 204 ---GSLMWDLMKQVCGAMGVRTNVPFSELTPEERDIVFNGPAVKKHILYKPKKGDDFAEL 260 Query: 370 RRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGTRLRREARHVYVENTPLP 429 F V + +E + + + +A+F+ PCA C GTRL AR +V L Sbjct: 261 DFTYFNAV-YTVENALAKAKDEKGLKRVARFLKEGPCADCSGTRLSAVARAPHVRGLNLA 319 Query: 430 AISDMSIGHAMEFFNNL--KLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTLSRSAETL 487 M++ A ++ + L +A I + D + L+++GL YL L R+ TL Sbjct: 320 EAGAMTLDAAADWVRGVPESLRPDMRPMATNICESFLDVARRLLDLGLGYLALDRAGATL 379 Query: 488 SGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHD 547 S GE QR++LA + GV+YVLDEPSIGLH + + LLG + L GN+V+VV+HD Sbjct: 380 STGERQRVQLARAVRNRTTGVLYVLDEPSIGLHPSNVDGLLGVMYDLVADGNSVVVVDHD 439 Query: 548 EDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEVPKKRVPA 607 ++A DH+I++G AG GG V+ +G + + A P S ++S + + ++ + Sbjct: 440 VRVLKACDHLIEMGLVAGAEGGHVIVQGTVGEVAANPSSRIAPFLSDQVSARIRERVAES 499 Query: 608 NPEKV--LKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGA 665 + +++T ++ + +K + + +P G +TGVSGSGK+T++ ++L P + Q G Sbjct: 500 QVFSLGHIRMTTSQLHTVKPLDVDIPRGRLVAVTGVSGSGKTTVVLESLIPALKAQAAGE 559 Query: 666 TIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESRARG 725 + E +G+ + ID +PIG RS ATY + +R FA +++A G Sbjct: 560 RLPEHVLELKAEGINRANL---IDATPIGANVRSTVATYADIHDELRRAFARADDAKAGG 616 Query: 726 YTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKYKGK-- 783 + G FS+N RC C G G I +++ FLPD+ + C C G RY E I+ K Sbjct: 617 WKAGDFSYNTGRLRCPTCDGTGSISLDVQFLPDVTIECPDCGGSRYASEADAIRRAVKAA 676 Query: 784 ---------------------------------TIHEVLDMTIEEAREFFDAVPALARKL 810 ++ +++ M++++A + + +L Sbjct: 677 KGKAAKMKVPDKRKAAKEKLSEATGQGGGNISLSLPQLMAMSVDQALAVTSDLKKVHARL 736 Query: 811 QTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQ 870 TL D+GL Y+ LG+ LSGGEAQR+KLA E+ K +++ DEPT GLH D++ Sbjct: 737 TTLHDLGLGYLTLGEPTPALSGGEAQRLKLASEMGK-AQSDAVFVFDEPTIGLHPFDVRV 795 Query: 871 LLDVLHKLRDQGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEAS 930 LL V +L G T+VVIEH+LDVI ADWI+D+GP GG GG I+ +GTPE +A S Sbjct: 796 LLGVFDRLVASGATVVVIEHDLDVIANADWIIDMGPGGGESGGRIVATGTPEQIAANPNS 855 Query: 931 HTARFL 936 T R+L Sbjct: 856 ITGRYL 861 Score = 119 bits (298), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 61/117 (52%), Positives = 81/117 (69%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 63 IEVRGAR HNLKNI++ IP +L+ V G+SGSGKSSLA LYAEG RRY+E+LS Y R+ Sbjct: 10 IEVRGARVHNLKNIDIDIPLCELVGVAGVSGSGKSSLALGVLYAEGSRRYLEALSTYTRR 69 Query: 64 FLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRC 120 L+ + VD + + A+++ Q+ T RST GT+TE+ + LRLLF+RV C Sbjct: 70 RLTQASRAQVDEVLHVPAALALHQRPTVPGIRSTFGTMTELLNSLRLLFSRVASHVC 126 Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 40/127 (31%), Positives = 64/127 (50%), Gaps = 25/127 (19%) Query: 1 MDKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLY------AEGQR--R 52 + I + ++ H +K +++ IPR +L+ VTG+SGSGK+++ ++L A G+R Sbjct: 504 LGHIRMTTSQLHTVKPLDVDIPRGRLVAVTGVSGSGKTTVVLESLIPALKAQAAGERLPE 563 Query: 53 YVESLSAYARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLF 112 +V L A EG++ A I+ N RSTV T +IHD LR F Sbjct: 564 HVLELKA-----------------EGINRANLIDATPIGANVRSTVATYADIHDELRRAF 606 Query: 113 ARVGEPR 119 AR + + Sbjct: 607 ARADDAK 613 >UniRef50_A0M2R3 UvrABC system protein A-like n=1 Tax=Gramella forsetii KT0803 RepID=A0M2R3_GRAFK Length = 1495 Score = 326 bits (835), Expect = 3e-87, Method: Compositional matrix adjust. Identities = 210/671 (31%), Positives = 343/671 (51%), Gaps = 63/671 (9%) Query: 247 FSANFACPICGYSMRE-LEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPELSLAGG 305 SA F Y+ +E + LFSFN+P G C C G+G +Y D ++++ + +L G Sbjct: 101 LSAVFRVLFARYAGKETMSKSLFSFNHPKGVCERCRGIGEAEYIDLNKLVGDENKTLREG 160 Query: 306 AI-----RGWDRRNFYYFQMLKSLADHYKFDVEAPWGSLSANVHKVVLYGS-------GK 353 A+ G+ + L + + F+V+ PW LS +V+L GS GK Sbjct: 161 AVTTTLPNGYIVYSQITVDELNKVCKAHGFNVDIPWKQLSEEQKEVILNGSERIKVFYGK 220 Query: 354 ENIEFKYMNDRGDTSIRRHPF-EGVLHNMERRYKETESSAVREELAKFISNRPCASCEGT 412 +IE + R F +G+L M + + + KF+S+ C C+G Sbjct: 221 HSIESRLRWKGFKAKPREEGFYKGILPIMSNILRLDRNPNI----LKFVSSSICPDCKGA 276 Query: 413 RLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDRLKFLVN 472 R++ E + ++S+ + L + +KI ++ D L+ Sbjct: 277 RIKPEHLKFKWKGLNFQEWMELSLKDLYDLLKRQNLVAGEQVLVDKICDQLFD----LIR 332 Query: 473 VGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLI 532 +G+ +L+ + +S G+AQRI+L Q+ + L G++YV DEPSIGL + + L L Sbjct: 333 LGMEEYSLNTPSTDISSGDAQRIKLIRQVNSSLQGILYVFDEPSIGLSEDYQDYLRHILN 392 Query: 533 HLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYM 592 L GNTV+VVEHD + I++AD ++++GP AGVHGGEV+ G ++ E L+ + + Sbjct: 393 RLISRGNTVMVVEHDLNFIKSADWIVELGPKAGVHGGEVIFNG------SIQEFLSAEKI 446 Query: 593 SGKRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLIND 652 S E+ + +K +K N D+ P L + K+ LI + Sbjct: 447 SSPTLAEL--RNTTFRNDKEVK------NESVDLFQPQPDELMLV------TRKTPLIME 492 Query: 653 TLFPIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVR 712 L ++ D+ K++ + PIG+TPRSNPATYTG+ +R Sbjct: 493 RLSNYCEKN-------------DL-------KLLSVSDQPIGKTPRSNPATYTGLADKIR 532 Query: 713 ELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYN 772 +L A PES++ T FSFN + GRCEAC+G GVI + M+ + I C +C GKR+ Sbjct: 533 DLLAKSPESKSLNLTKTAFSFNNKRGRCEACEGAGVITLSMNVMGTINQICPRCNGKRFK 592 Query: 773 RETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSG 832 E L++ + K I ++ +++I EA +FF L + L ++ +GL YI+LGQ + TLSG Sbjct: 593 AEVLQVHWNKKNISDIYNLSISEAYDFFSEEKQLQKILSLMLQLGLGYIKLGQPSNTLSG 652 Query: 833 GEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNL 892 GEAQR+KL + +K+ + +TL +L+EP+ GLH ++++LL LH+L+ Q I+ E + Sbjct: 653 GEAQRIKLTKHFAKQ-SKKTLLLLEEPSIGLHQQNVRELLKALHQLKAQTAGIICFESHP 711 Query: 893 DVIKTADWIVD 903 ++D +VD Sbjct: 712 LFRSSSDMLVD 722 Score = 278 bits (710), Expect = 1e-72, Method: Compositional matrix adjust. Identities = 191/657 (29%), Positives = 319/657 (48%), Gaps = 55/657 (8%) Query: 258 YSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPELSLAGGAIRGWDRRNFY- 316 Y +EL FS N+ G C CDG+G + D D+++ + S+A G +Y Sbjct: 857 YENKELSASHFSNNHELGKCAICDGIGEELLPDLDKIVLDEGKSIADGLFEHNKALGYYG 916 Query: 317 -----YFQMLKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKE----NIEFKYMNDRGDT 367 Y +++ L Y F ++ P+ L+ N +++ G+G+ + +FK G+ Sbjct: 917 HAGSQYMAIVEELGATYGFSLKTPFKKLTNNQKEILFNGTGETVWNTSWQFKTKTREGEQ 976 Query: 368 SIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGTRLRREARHVYVENTP 427 + +EG+ H ++ Y +T + ++L S C C G+ L+ E + Sbjct: 977 ELSMQ-WEGLFHYLKEEYYKTRKNKHIDKLKALFSLAECGHCSGSGLKPERLDFKIGGKS 1035 Query: 428 LPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDRLKFLVN----VGLNYLTLSRS 483 + I +S ++ +N + +I +K+L +I L +N + +NYL L R Sbjct: 1036 IHEIKLLSFEALEDWLSNDNF---QEEIDKKLLSKIKPYLSNTINRAMQLHINYLQLHRK 1092 Query: 484 AETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIV 543 + +LSGGE QR+ L Q+ + L G+ Y+LDEPS GL + L+ L L + GNTV+V Sbjct: 1093 SSSLSGGENQRVALIKQLNSPLKGITYLLDEPSAGLSSDNIPDLINILKELIEKGNTVVV 1152 Query: 544 VEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEVPKK 603 +EH+++ I +AD ++ +GP AG GG + +G P++ Q + ++ P K Sbjct: 1153 IEHNKEIILSADQLVQVGPEAGKPGGYITYQG-------TPKNFLKQAICHPY-LKKPSK 1204 Query: 604 RVPANPEK-VLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQ- 661 V K + + ++L TL +P+G T I+G SG GK+TL+ D L P + Sbjct: 1205 AVALKCAKDAINIQKLNKHSLVKDTLEVPIGGITAISGKSGIGKTTLVKDILIPSIETNT 1264 Query: 662 -LNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPAT----YTGVFTPVRELFA 716 +N +I P Y++ E + RS+ T Y + + ++FA Sbjct: 1265 PINCGSIKFPQTYKEAHYFE-------------AKKLRSHAKTLLVSYLNLLKDISKIFA 1311 Query: 717 GVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETL 776 P FS+ + +C C+G G ++ + + + C+ C+GKRYN + L Sbjct: 1312 -----HETALKPRDFSYKTKTSQCPNCKGKGYLETSLDVVANSIEKCEVCQGKRYNDDIL 1366 Query: 777 EIKYKGKTIHEVLDMTIEEAREFFDA-VPALARK-LQTLMDVGLTYIRLGQSATTLSGGE 834 + K I ++L I E +E+ VP + L L +VGL ++ L Q +LS GE Sbjct: 1367 RHTVRSKNIADILAFNINELKEWVQGEVPEKTLQFLDQLEEVGLAHLSLDQPVQSLSSGE 1426 Query: 835 AQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHN 891 QR+ L L + G +TLYILDEP+ GLH+ADI L +L KL + N I++I+HN Sbjct: 1427 KQRLLLLNWL-QDGATKTLYILDEPSIGLHYADIDLLYSILEKL-SKANDILIIDHN 1481 Score = 122 bits (305), Expect = 8e-26, Method: Compositional matrix adjust. Identities = 97/363 (26%), Positives = 154/363 (42%), Gaps = 58/363 (15%) Query: 403 NRPCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKE 462 N+ C C G R + E V+ + I ++SI A +FF+ EK L++ Sbjct: 580 NQICPRCNGKRFKAEVLQVHWNKKNISDIYNLSISEAYDFFSE-----------EKQLQK 628 Query: 463 IGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQR 522 I L ++ +GL Y+ L + + TLSGGEAQRI+L + +L+EPSIGLHQ+ Sbjct: 629 I---LSLMLQLGLGYIKLGQPSNTLSGGEAQRIKLTKHFAKQSKKTLLLLEEPSIGLHQQ 685 Query: 523 DNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMA 582 + LL L L+ +I E ++D ++D Sbjct: 686 NVRELLKALHQLKAQTAGIICFESHPLFRSSSDMLVD----------------------- 722 Query: 583 VPESLTGQYMSGKRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVS 642 + + E+ K+V V+ + GAR + LKD+ + LP + ITG+S Sbjct: 723 ----------NASKTPELKPKKVLDQRRDVISIKGARTHYLKDLDIDLPKNQLSVITGIS 772 Query: 643 GSGKSTLINDTLFPIAQRQLNGATIAEPAPYRDIQGLEHFDKV------IDIDQSPIGRT 696 GSGKS+++ DTL +++ A + D + I I + T Sbjct: 773 GSGKSSMVIDTLHGYGLQEMTKQFSAYQQSRVGVNFQFEVDHIAGLSPTICITRKTKSFT 832 Query: 697 PRSNPATYTGVFTPVRELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFL 756 RS+ A TG+ +R F+ + + + FS N G+C C G G L Sbjct: 833 ERSDIAKQTGIDKMLRFAFSRKAQYENKELSASHFSNNHELGKCAICDGIG-----EELL 887 Query: 757 PDI 759 PD+ Sbjct: 888 PDL 890 Score = 115 bits (289), Expect = 7e-24, Method: Compositional matrix adjust. Identities = 78/252 (30%), Positives = 122/252 (48%), Gaps = 41/252 (16%) Query: 714 LFAGVPESRARGYTPGRFSFNVRGGRCE-ACQGDGVIKVEMHFLPDIY------------ 760 LF G E+ T +F R G E + Q +G+ H+L + Y Sbjct: 952 LFNGTGETVWN--TSWQFKTKTREGEQELSMQWEGL----FHYLKEEYYKTRKNKHIDKL 1005 Query: 761 ------VPCDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFD------------- 801 C C G E L+ K GK+IHE+ ++ E ++ Sbjct: 1006 KALFSLAECGHCSGSGLKPERLDFKIGGKSIHEIKLLSFEALEDWLSNDNFQEEIDKKLL 1065 Query: 802 --AVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEP 859 P L+ + M + + Y++L + +++LSGGE QRV L ++L+ G T Y+LDEP Sbjct: 1066 SKIKPYLSNTINRAMQLHINYLQLHRKSSSLSGGENQRVALIKQLNSPLKGIT-YLLDEP 1124 Query: 860 TTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSG 919 + GL +I L+++L +L ++GNT+VVIEHN ++I +AD +V +GPE G GG I G Sbjct: 1125 SAGLSSDNIPDLINILKELIEKGNTVVVIEHNKEIILSADQLVQVGPEAGKPGGYITYQG 1184 Query: 920 TPETVAECEASH 931 TP+ + H Sbjct: 1185 TPKNFLKQAICH 1196 Score = 112 bits (280), Expect = 7e-23, Method: Compositional matrix adjust. Identities = 61/177 (34%), Positives = 102/177 (57%), Gaps = 13/177 (7%) Query: 763 CDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFD----------AVPALARKLQT 812 C CKG R E L+ K+KG E +++++++ + V + +L Sbjct: 270 CPDCKGARIKPEHLKFKWKGLNFQEWMELSLKDLYDLLKRQNLVAGEQVLVDKICDQLFD 329 Query: 813 LMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLL 872 L+ +G+ L +T +S G+AQR+KL R+++ G LY+ DEP+ GL D Q L Sbjct: 330 LIRLGMEEYSLNTPSTDISSGDAQRIKLIRQVNSSLQG-ILYVFDEPSIGLS-EDYQDYL 387 Query: 873 -DVLHKLRDQGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECE 928 +L++L +GNT++V+EH+L+ IK+ADWIV+LGP+ G GGE++ +G+ + E Sbjct: 388 RHILNRLISRGNTVMVVEHDLNFIKSADWIVELGPKAGVHGGEVIFNGSIQEFLSAE 444 Score = 97.1 bits (240), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 48/113 (42%), Positives = 73/113 (64%) Query: 2 DKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYA 61 D I ++GARTH LK++++ +P+++L V+TG+SGSGKSS+ DTL+ G + + SAY Sbjct: 741 DVISIKGARTHYLKDLDIDLPKNQLSVITGISGSGKSSMVIDTLHGYGLQEMTKQFSAYQ 800 Query: 62 RQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFAR 114 + + + + +VDHI GLSP I I +K+ S RS + T I LR F+R Sbjct: 801 QSRVGVNFQFEVDHIAGLSPTICITRKTKSFTERSDIAKQTGIDKMLRFAFSR 853 Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 47/93 (50%), Positives = 64/93 (68%) Query: 22 PRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQFLSLMEKPDVDHIEGLSP 81 P ++LIVVTGLSGSGKSSLA D + EG R ++ESL AY++Q L+ +VD IEGL P Sbjct: 19 PENQLIVVTGLSGSGKSSLAMDVIANEGYRYFLESLPAYSQQNAQLIPTAEVDDIEGLPP 78 Query: 82 AISIEQKSTSHNPRSTVGTITEIHDYLRLLFAR 114 I +EQ + ++T GT++E+ R+LFAR Sbjct: 79 VIRVEQSKRFQSVKATFGTLSELSAVFRVLFAR 111 Score = 43.1 bits (100), Expect = 0.058, Method: Compositional matrix adjust. Identities = 38/128 (29%), Positives = 56/128 (43%), Gaps = 18/128 (14%) Query: 631 PVGLFTCITGVSGSGKSTLINDTL-----------FPIAQRQLNGATIAEPAPYRDIQGL 679 P +TG+SGSGKS+L D + P +Q A + A DI+GL Sbjct: 19 PENQLIVVTGLSGSGKSSLAMDVIANEGYRYFLESLPAYSQQ--NAQLIPTAEVDDIEGL 76 Query: 680 EHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESRARGYTPGRFSFNVRGGR 739 VI ++QS ++ ++ T + + R LFA + + FSFN G Sbjct: 77 P---PVIRVEQSKRFQSVKATFGTLSELSAVFRVLFARY--AGKETMSKSLFSFNHPKGV 131 Query: 740 CEACQGDG 747 CE C+G G Sbjct: 132 CERCRGIG 139 >UniRef50_UPI0001B5406F UvrA-like protein n=1 Tax=Streptomyces sp. AA4 RepID=UPI0001B5406F Length = 748 Score = 323 bits (828), Expect = 2e-86, Method: Compositional matrix adjust. Identities = 235/710 (33%), Positives = 358/710 (50%), Gaps = 89/710 (12%) Query: 245 LLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPELSLAG 304 +LFS P GYS +SFN+P+G CP C GLG D +R+I E SL Sbjct: 112 MLFS-RLGEPSAGYSP------AYSFNDPSGMCPACAGLGTVTDIDGERMIDR-ERSLND 163 Query: 305 GA-------IRGWDRRNFYYFQMLKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKENIE 357 GA + W + + Y FD + P ++ + +L+G Sbjct: 164 GAMVFPSFAVGSWIWKRYVYSGF---------FDNDLPLREWPEDLVQFLLHGP------ 208 Query: 358 FKYMNDRGDTSIRRHP----FEGVLHNMERRYKETESS---AVREELAKFISNRPCASCE 410 + + R P ++ ++ + R E E+ AVR LA RPC C+ Sbjct: 209 ----TQKPPNPLPRFPASAKYQSMVPRIRRLLVEREAKMGPAVRAALADVTRQRPCPECD 264 Query: 411 GTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDRLKFL 470 G+RL AR + + + +EF AG + A ++ + RL+ + Sbjct: 265 GSRLAPAARESRINGVSIVDLGYRDAAGLLEF-----CAGLDHEWARPLVAALRLRLESM 319 Query: 471 VNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGT 530 + +GL +L R+ TLSGGE+QR++L +G+ L + YVLDEP+ GLH D L+ Sbjct: 320 ITLGLGHLHCYRATPTLSGGESQRLKLVRHLGSSLTDLTYVLDEPTDGLHPADVASLVDV 379 Query: 531 LIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQ 590 L LRD GNTV+VV+H E + AADHVID+GPGAG GG VV GP E + + Sbjct: 380 LRRLRDHGNTVLVVDHHEAVMVAADHVIDLGPGAGEAGGRVVFHGPPEKLRKADTTTARA 439 Query: 591 YMSGKRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLI 650 +G R + ++ P L L G + L+++ + +P G+ T ITGV+GSGKSTL Sbjct: 440 LRTGVRLKDTLRE-----PTGWLPLRGLDRHTLRNIDVDVPTGVLTVITGVAGSGKSTLA 494 Query: 651 NDTLFPIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTP 710 + +AE P + +DQS I T RS T+ G+ P Sbjct: 495 GE--------------LAERHP-----------RFTVVDQSQIVATSRSTVGTWLGLADP 529 Query: 711 VRELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKR 770 V+ FA V G +P F+ +GG C AC+G GV + ++ FL D+ PC++ + Sbjct: 530 VQRAFAEV-----SGESPKLFNPRSQGG-CPACRGTGVRRTDLAFLEDVDTPCEEGR-PG 582 Query: 771 YNRETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTL 830 + E L+ ++ T+ EVL + + P + R L ++GL ++ G++ TL Sbjct: 583 FRPEALQARWS-LTVLEVLATPVSALARYVPH-PDVVRLAALLGELGLGHLASGRTLDTL 640 Query: 831 SGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEH 890 SGGE QR+KLAR+L T L ++DEPT GLH +D +++ +L +L D+G T+VV+EH Sbjct: 641 SGGERQRLKLARQLDS--TSDDL-LVDEPTAGLHPSDTTRMVALLDRLVDEGRTLVVVEH 697 Query: 891 NLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLKPML 940 +L V+ ADW++DLGP G GG++L +GTP+ +AE + + T R+ + L Sbjct: 698 SLHVVAAADWVLDLGPGAGENGGQVLYTGTPKGLAEHDGA-TGRYFRSAL 746 Score = 111 bits (277), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 53/115 (46%), Positives = 78/115 (67%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 63 I +RG RTHNL ++++ IP+ +L+ VTG+SGSGKSSLAF TL AE +R+ ++ A+ R Sbjct: 6 ISLRGVRTHNLADVDVDIPKHQLVAVTGVSGSGKSSLAFATLAAESRRQLYSTMPAFVRT 65 Query: 64 FLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEP 118 L P+ + GL+ + ++Q+ N RSTVGT TE+ LR+LF+R+GEP Sbjct: 66 KLPHDPAPEASSLSGLTTVVVVDQRPLGTNSRSTVGTATEVWTMLRMLFSRLGEP 120 Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 58/149 (38%), Positives = 78/149 (52%), Gaps = 12/149 (8%) Query: 609 PEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIA 668 P V+ L G R +NL DV + +P +TGVSGSGKS+L TL ++RQL A Sbjct: 2 PSNVISLRGVRTHNLADVDVDIPKHQLVAVTGVSGSGKSSLAFATLAAESRRQLYSTMPA 61 Query: 669 --------EPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPE 720 +PAP + L V+ +DQ P+G RS T T V+T +R LF+ + E Sbjct: 62 FVRTKLPHDPAP--EASSLSGLTTVVVVDQRPLGTNSRSTVGTATEVWTMLRMLFSRLGE 119 Query: 721 SRARGYTPGRFSFNVRGGRCEACQGDGVI 749 A GY+P +SFN G C AC G G + Sbjct: 120 PSA-GYSPA-YSFNDPSGMCPACAGLGTV 146 >UniRef50_P52087 UvrABC system protein A (Fragment) n=44 Tax=Bacteria RepID=UVRA_PSELE Length = 689 Score = 322 bits (826), Expect = 3e-86, Method: Compositional matrix adjust. Identities = 196/545 (35%), Positives = 301/545 (55%), Gaps = 36/545 (6%) Query: 268 FSFNNPAGACPTCDGLGVQQYFDPDRVIQNPELSLAGGAIRGWDRRNFYYFQMLKSLADH 327 FS N P GACPTC GLG ++ + ++ AI W ++ Q L+ + Sbjct: 147 FSPNTPEGACPTCHGLGRVYEVTEQSMVPDDSKTIRERAIAAWP--PAWHGQNLRDILTT 204 Query: 328 YKFDVEAPWGSLSANVHKVVLYGSGKENI---------EFKYMNDRGDTSIRRHPFEGVL 378 +D++ PW L K +L+ + + E ++ R +T + F Sbjct: 205 LGYDIDIPWRDLPKKDRKWILFTEEQPVVPVYAGFTLDEVRHALKRKETPSYQGTFTSAR 264 Query: 379 HNMERRYKETESSAVREELAKFISNRPCASCEGTRLRREARHVYVENTPLPAISDMSIGH 438 + + TES A+++ +++++ + C C+G RLR E+ V + +S + + H Sbjct: 265 KYVLDTFANTESPAMKKRVSQYMVGKECTLCQGKRLRPESLAVTFAGYDITELSRLPLKH 324 Query: 439 AMEFFNNL---------KLAG---QRAKIAEKILKEIGDRLKFLVNVGLNYLTLSRSAET 486 + KLA ++A + ++I +++ +RL L+++GL YLTL RS T Sbjct: 325 LATLLHPYAQENTPDWDKLAAKNPEKAIVTQRIAEDLSNRLSVLLSLGLGYLTLERSTPT 384 Query: 487 LSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEH 546 LS GE QR+RLA+Q+ + L GV+YVLDEPS GLH D + LL L L+ GN++ VVEH Sbjct: 385 LSPGELQRLRLATQVHSNLFGVVYVLDEPSAGLHPADTQALLAALDRLKQAGNSLFVVEH 444 Query: 547 DEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEVPKKRVP 606 IR AD ++D+GP AG HGG ++ GP + + V ES T +Y+ ++ ++ K+ Sbjct: 445 ALGVIRHADWIVDVGPEAGEHGGRILYSGPPQGLSEVAESHTRRYLFPDKEADIFAKQPS 504 Query: 607 ANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGAT 666 +P+ L++ G NNL ++T P+G+ T ++GVSGSGKS+L++ L + + L Sbjct: 505 RSPQGWLQVAGVTRNNLDNLTAAFPLGVLTSVSGVSGSGKSSLVSQVLVELVSKALGQEL 564 Query: 667 IAE-----------PAPY--RDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRE 713 +AE PA R G+E +++ +DQ PIGRTPRSN ATYTG+F VR+ Sbjct: 565 VAEAEQGESIEHDTPATLGGRITAGMESIKRLVTVDQKPIGRTPRSNLATYTGLFDHVRK 624 Query: 714 LFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNR 773 LFA ++AR Y GRFSFNV GRC C+G+G + VE+ FLP +Y PC CKG R+N Sbjct: 625 LFASTRAAKARHYDAGRFSFNVAKGRCGNCEGEGFVMVELLFLPSVYAPCPVCKGTRFNA 684 Query: 774 ETLEI 778 +TLEI Sbjct: 685 KTLEI 689 Score = 139 bits (351), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 65/113 (57%), Positives = 89/113 (78%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 63 ++VRGAR HNLK+++L IPR+ L+V TG+SGSGKSSLAF TLYAE QRRY+ES+S YAR+ Sbjct: 21 VQVRGAREHNLKDVHLDIPRNALVVFTGISGSGKSSLAFGTLYAEAQRRYLESVSPYARR 80 Query: 64 FLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVG 116 M P+VD IEGL PAI+++Q+ + RS+VG+IT + + LR+L++R G Sbjct: 81 LFHQMSVPEVDSIEGLPPAIALQQQRGAPTTRSSVGSITTLSNSLRMLYSRAG 133 Score = 126 bits (316), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 78/202 (38%), Positives = 112/202 (55%), Gaps = 27/202 (13%) Query: 763 CDQCKGKRYNRETLEIKYKGKTIHEVLDMTI-----------EEAREFFDAVPA------ 805 C C+GKR E+L + + G I E+ + + +E +D + A Sbjct: 292 CTLCQGKRLRPESLAVTFAGYDITELSRLPLKHLATLLHPYAQENTPDWDKLAAKNPEKA 351 Query: 806 ---------LARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYIL 856 L+ +L L+ +GL Y+ L +S TLS GE QR++LA ++ G +Y+L Sbjct: 352 IVTQRIAEDLSNRLSVLLSLGLGYLTLERSTPTLSPGELQRLRLATQVHSNLFG-VVYVL 410 Query: 857 DEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEIL 916 DEP+ GLH AD Q LL L +L+ GN++ V+EH L VI+ ADWIVD+GPE G GG IL Sbjct: 411 DEPSAGLHPADTQALLAALDRLKQAGNSLFVVEHALGVIRHADWIVDVGPEAGEHGGRIL 470 Query: 917 VSGTPETVAECEASHTARFLKP 938 SG P+ ++E SHT R+L P Sbjct: 471 YSGPPQGLSEVAESHTRRYLFP 492 Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 52/168 (30%), Positives = 75/168 (44%), Gaps = 28/168 (16%) Query: 610 EKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAE 669 E +++ GAR +NLKDV L +P TG+SGSGKS+L TL+ AQR+ + Sbjct: 18 EGFVQVRGAREHNLKDVHLDIPRNALVVFTGISGSGKSSLAFGTLYAEAQRRY----LES 73 Query: 670 PAPYR----------DIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVP 719 +PY ++ +E I + Q T RS+ + T + +R L+ Sbjct: 74 VSPYARRLFHQMSVPEVDSIEGLPPAIALQQQRGAPTTRSSVGSITTLSNSLRMLY---- 129 Query: 720 ESRARGYTPGR-------FSFNVRGGRCEACQGDGVIK--VEMHFLPD 758 SRA Y G+ FS N G C C G G + E +PD Sbjct: 130 -SRAGNYPKGQDILYAESFSPNTPEGACPTCHGLGRVYEVTEQSMVPD 176 >UniRef50_C9RLN7 ABC transporter related protein n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RLN7_FIBSS Length = 840 Score = 306 bits (784), Expect = 3e-81, Method: Compositional matrix adjust. Identities = 182/508 (35%), Positives = 278/508 (54%), Gaps = 26/508 (5%) Query: 403 NRPCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNL--KLAGQRAKIAEKIL 460 N C C G RL++ + V++ I E + + GQ K Sbjct: 350 NAECPHCHGLRLKKTYLNATVDDVSYKQILTTEFAELPELLHKIFDNKIGQNLK---ATF 406 Query: 461 KEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLH 520 + DR++ + ++G+ YLT R+ +TLSGGE QR++LAS L G++ LDEP+ GLH Sbjct: 407 NSLLDRIEAINDLGIGYLTPGRAGQTLSGGELQRLKLASLSTGHLNGLLIALDEPASGLH 466 Query: 521 QRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAI 580 D L L +R GNT++++EH+ I+ AD++I++GPGAG GGE++ +G + + Sbjct: 467 ASDVSALWKVLEKIRKRGNTLVLIEHNPQIIKRADYIIEMGPGAGEKGGEILFQGTRDEV 526 Query: 581 MAVPESLTGQYMS--GKRKIEVPKKRVPANPEK--VLKLTGARGNNLKDVTLTLPVGLFT 636 + PES TG ++ G RK EV + EK + + ++ V P+ F+ Sbjct: 527 LENPESPTGMWIKAVGSRKSEVGRNVECHCEEKSQAILVKNFAKFDMAPVNAAFPINKFS 586 Query: 637 CITGVSGSGKSTLINDTLFPIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRT 696 ITG SGSGKSTL+ + IA+ A + + L D + + + Sbjct: 587 VITGQSGSGKSTLLFEN-------------IAKRAKAEEFKKL-GIDALSILTTGDFHGS 632 Query: 697 PRSNPATYTGVFTPVRELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFL 756 RS + G+ T +R+LFA +PES+ RGYT +FS + GGRCE C+G+GVI + + Sbjct: 633 KRSTVLSAIGLTTLLRDLFAKLPESKVRGYTASKFSMHAPGGRCENCKGEGVIYDPLGYE 692 Query: 757 PDIYVPCDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDV 816 C C GKR+ E LEI++K +I ++LDM I A + F + A KL+ L+D Sbjct: 693 ES---ECPVCLGKRFRDEVLEIRFKSLSIADILDMEIGSAYKLFTNMKPFAEKLKPLVDT 749 Query: 817 GLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLH 876 GL Y+RLGQ+ LSGGE R++L+ L++ TL++ DEP GLH DIQQLL ++H Sbjct: 750 GLDYLRLGQTTAHLSGGERARLRLSITLARAKAPNTLFLFDEPARGLHQKDIQQLLGLIH 809 Query: 877 KLRDQGNTIVVIEHNLDVIKTADWIVDL 904 L + G+T++ IEH D + AD++V+L Sbjct: 810 GLCNAGHTVIAIEHAQDFVDAADYVVEL 837 Score = 136 bits (343), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 97/333 (29%), Positives = 155/333 (46%), Gaps = 44/333 (13%) Query: 1 MDKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAY 60 +D I +RG R HNLKN++ P K+ VV G SG GKS+L DTL+ E +RRY+E+LS + Sbjct: 2 LDYISIRGCRLHNLKNVDAQFPLGKITVVCGPSGCGKSTLVMDTLHGESKRRYLETLSPF 61 Query: 61 ARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRC 120 A L +D EGL +++I +++ +I E + LR LFA +P C Sbjct: 62 AADLLGGKRSIPLDSAEGLPASLAIAATRGEAPAKASALSIAECDNALRTLFAAFAKPAC 121 Query: 121 PDHDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPI-----------------------IKE 157 P P+ +Q+ +++ P G +L LA I K+ Sbjct: 122 PICGAPMVSQSREEIIRETAGMPIGTKLQFLAKIETGNAEMATPQQVRGDINADRNDKKK 181 Query: 158 RKGEHTKTLENLA----SQGYIRARIDGEVCDLSD--PPKLELQKKHTIEVVVDRFKVRD 211 + + TL+ L+ +QG+ RA DG + L+D P + L K ++VDR VR+ Sbjct: 182 AQSKSRTTLDKLSAVFLAQGFTRAIADGTMYSLADLLPGEKVLTPKEFF-IIVDRIIVRE 240 Query: 212 DLTQRLAESFETALELSGGTAVVADMDDPKAEELLFSANFACPICG----------YSMR 261 + R+AE+ + L+L+ +A+ D+ E +S CP ++ Sbjct: 241 NTRTRIAEAVDGTLKLT-HSAITLDI---AGERKFYSTKPCCPNASDEQHQSQKSNETVA 296 Query: 262 ELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRV 294 L+ R FS + C C G G+ Q P ++ Sbjct: 297 SLDARAFSPYSRTSVCEYCYGTGIIQEAAPAKI 329 Score = 120 bits (300), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 81/243 (33%), Positives = 121/243 (49%), Gaps = 38/243 (15%) Query: 731 FSFNVRGGRCEACQGDGVIK------------------VEMHFLPDIYVPCDQCKGKRYN 772 FS R CE C G G+I+ + D C C G R Sbjct: 303 FSPYSRTSVCEYCYGTGIIQEAAPAKINEKGGGKGRAESNVESDEDENAECPHCHGLRLK 362 Query: 773 RETL-----EIKYKG----------KTIHEVLDMTI-EEAREFFDAVPALARKLQTLMDV 816 + L ++ YK + +H++ D I + + F++ L +++ + D+ Sbjct: 363 KTYLNATVDDVSYKQILTTEFAELPELLHKIFDNKIGQNLKATFNS---LLDRIEAINDL 419 Query: 817 GLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLH 876 G+ Y+ G++ TLSGGE QR+KLA LS L LDEP +GLH +D+ L VL Sbjct: 420 GIGYLTPGRAGQTLSGGELQRLKLA-SLSTGHLNGLLIALDEPASGLHASDVSALWKVLE 478 Query: 877 KLRDQGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFL 936 K+R +GNT+V+IEHN +IK AD+I+++GP G GGEIL GT + V E S T ++ Sbjct: 479 KIRKRGNTLVLIEHNPQIIKRADYIIEMGPGAGEKGGEILFQGTRDEVLENPESPTGMWI 538 Query: 937 KPM 939 K + Sbjct: 539 KAV 541 Score = 102 bits (254), Expect = 8e-20, Method: Compositional matrix adjust. Identities = 57/159 (35%), Positives = 89/159 (55%), Gaps = 15/159 (9%) Query: 406 CASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGD 465 C C G R R E + ++ + I DM IG A + F N+K + Sbjct: 696 CPVCLGKRFRDEVLEIRFKSLSIADILDMEIGSAYKLFTNMK--------------PFAE 741 Query: 466 RLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIG-AGLVGVMYVLDEPSIGLHQRDN 524 +LK LV+ GL+YL L ++ LSGGE R+RL+ + A +++ DEP+ GLHQ+D Sbjct: 742 KLKPLVDTGLDYLRLGQTTAHLSGGERARLRLSITLARAKAPNTLFLFDEPARGLHQKDI 801 Query: 525 ERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPG 563 ++LLG + L + G+TVI +EH +D + AAD+V+++ G Sbjct: 802 QQLLGLIHGLCNAGHTVIAIEHAQDFVDAADYVVELKRG 840 Score = 42.7 bits (99), Expect = 0.064, Method: Compositional matrix adjust. Identities = 21/49 (42%), Positives = 31/49 (63%) Query: 613 LKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQ 661 + + G R +NLK+V P+G T + G SG GKSTL+ DTL ++R+ Sbjct: 5 ISIRGCRLHNLKNVDAQFPLGKITVVCGPSGCGKSTLVMDTLHGESKRR 53 >UniRef50_B3SEI3 Putative uncharacterized protein (Fragment) n=1 Tax=Trichoplax adhaerens RepID=B3SEI3_TRIAD Length = 1063 Score = 297 bits (761), Expect = 1e-78, Method: Compositional matrix adjust. Identities = 155/379 (40%), Positives = 231/379 (60%), Gaps = 36/379 (9%) Query: 206 RFKVRDDLTQRLAESFETALELSGGTAVV------ADMDDPKAEE---LLFSANFACPIC 256 R K+ D+ R+ +S E L++S G V D P EE L+FS F+CPI Sbjct: 272 RVKIDDNSRDRIVDSVENILKISKGLLYVEIKSIPKDCSSPDIEEGKVLIFSEKFSCPIS 331 Query: 257 GYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPELSLAGGAIRGWDRRNF- 315 G+S+ E+EPR+FSFN+P GACP C+GLG + FDP +I + L+L GAI W +++ Sbjct: 332 GFSLTEIEPRIFSFNSPYGACPKCNGLGKEMSFDPQLIIPDKTLTLLEGAIAPWKKKHSK 391 Query: 316 -------YYFQMLKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKENIEFKYMNDRGDTS 368 +Y +L +LA HY FD+ P+ L ++ +++ G+ E+I+F Y + ++ Sbjct: 392 YSNTQYKFYESLLNALAIHYNFDLNTPYEELPNDIKDIIMNGNNGEDIKFSYQDGYRQST 451 Query: 369 IRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGTRLRREARHVYVENTPL 428 + + PF+GV+ +E + +TES+ + EELAK+ C+ C+G R+++E+ V + N + Sbjct: 452 VNQ-PFKGVIQILEEKLNKTESNYIIEELAKYQIQINCSDCQGFRVKKESLCVKINNLHI 510 Query: 429 PAISDMSIGHAMEFFNNLK--LAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTLSRSAET 486 ++ SI A + NLK L + I++ ILKEI R+ + T Sbjct: 511 GNVTKFSISDAYSWIKNLKDNLDQTQINISKLILKEIERRI----------------SST 554 Query: 487 LSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEH 546 LSGGE+QRIRLASQIG+ L GV+YVLDEPSIGLHQ DN++L+ +L LRDLGN++IVVEH Sbjct: 555 LSGGESQRIRLASQIGSSLTGVLYVLDEPSIGLHQSDNDKLINSLKELRDLGNSIIVVEH 614 Query: 547 DEDAIRAADHVIDIGPGAG 565 DED + +D++IDIG AG Sbjct: 615 DEDTMVQSDYLIDIGKYAG 633 Score = 283 bits (725), Expect = 2e-74, Method: Compositional matrix adjust. Identities = 127/189 (67%), Positives = 157/189 (83%) Query: 737 GGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEA 796 GGRCE C+GDG++K+EMHFLPD+YV CD+C GKRYN++TL+IKY GK I ++L+MT++E Sbjct: 633 GGRCEVCEGDGLLKIEMHFLPDVYVKCDECNGKRYNKDTLQIKYNGKNIADILEMTVDEG 692 Query: 797 REFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYIL 856 FFD +P + KL+ L VGL YI +GQSATTLSGGEAQRVKLA+ELSK+ TG+TLYIL Sbjct: 693 IIFFDKIPLINDKLKALNSVGLGYISIGQSATTLSGGEAQRVKLAKELSKKSTGRTLYIL 752 Query: 857 DEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEIL 916 DEPTTGLH DIQ LL VLH+L D GNT++VIEHNLDVIKTAD+I+D+GP+G GGE++ Sbjct: 753 DEPTTGLHSHDIQNLLQVLHELVDMGNTVIVIEHNLDVIKTADYIIDIGPKGDIKGGEVV 812 Query: 917 VSGTPETVA 925 GTPE V Sbjct: 813 AIGTPEEVT 821 Score = 139 bits (350), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 77/197 (39%), Positives = 113/197 (57%), Gaps = 21/197 (10%) Query: 406 CASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGD 465 C C G R ++ + + I +M++ + FF+ + L I D Sbjct: 659 CDECNGKRYNKDTLQIKYNGKNIADILEMTVDEGIIFFDKIPL--------------IND 704 Query: 466 RLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVG-VMYVLDEPSIGLHQRDN 524 +LK L +VGL Y+++ +SA TLSGGEAQR++LA ++ G +Y+LDEP+ GLH D Sbjct: 705 KLKALNSVGLGYISIGQSATTLSGGEAQRVKLAKELSKKSTGRTLYILDEPTTGLHSHDI 764 Query: 525 ERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEG-PLEAIMAV 583 + LL L L D+GNTVIV+EH+ D I+ AD++IDIGP + GGEVVA G P E + + Sbjct: 765 QNLLQVLHELVDMGNTVIVIEHNLDVIKTADYIIDIGPKGDIKGGEVVAIGTPEEVTVGM 824 Query: 584 PESL-----TGQYMSGK 595 + + TGQ +GK Sbjct: 825 VKKVSDFASTGQDTAGK 841 Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 62/193 (32%), Positives = 108/193 (55%), Gaps = 15/193 (7%) Query: 759 IYVPCDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKL-QTLMDVG 817 I + C C+G R +E+L +K I V +I +A + + L L QT +++ Sbjct: 484 IQINCSDCQGFRVKKESLCVKINNLHIGNVTKFSISDA---YSWIKNLKDNLDQTQINIS 540 Query: 818 LTYIRLGQS--ATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVL 875 ++ + ++TLSGGE+QR++LA ++ TG LY+LDEP+ GLH +D +L++ L Sbjct: 541 KLILKEIERRISSTLSGGESQRIRLASQIGSSLTG-VLYVLDEPSIGLHQSDNDKLINSL 599 Query: 876 HKLRDQGNTIVVIEHNLDVIKTADWIVDLGPEGG------SGGG--EILVSGTPETVAEC 927 +LRD GN+I+V+EH+ D + +D+++D+G G G G +I + P+ +C Sbjct: 600 KELRDLGNSIIVVEHDEDTMVQSDYLIDIGKYAGGRCEVCEGDGLLKIEMHFLPDVYVKC 659 Query: 928 EASHTARFLKPML 940 + + R+ K L Sbjct: 660 DECNGKRYNKDTL 672 >UniRef50_Q92AV6 Lin1813 protein n=1 Tax=Listeria innocua RepID=Q92AV6_LISIN Length = 620 Score = 290 bits (742), Expect = 2e-76, Method: Compositional matrix adjust. Identities = 168/529 (31%), Positives = 272/529 (51%), Gaps = 42/529 (7%) Query: 262 ELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPELSLAG-----GAIRGWDRRNFY 316 ++ P +FS+ +P G C C G G Q + + +I + +++ G+ +G+ Sbjct: 126 DINPDIFSYLSPNGMCFDCAGTGKQFHIHMENIISSKTVTVEQVFQQIGSTKGY------ 179 Query: 317 YFQMLKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKENIEFKYMNDRGDTSIRRHPFEG 376 L L Y + + + ++YG N G TS + E Sbjct: 180 ----LNLLQRKYTAYFHEAFSNCPIEIQNELIYGVVD--------NYSGKTS---YCIER 224 Query: 377 VLHNMERRYKETESSAVREELAKFISNRPCASCEGTRLRREARHVYVENTPLPAISDMSI 436 VLHN R E++ +F S C SC G R+ EAR + + N L I+ MS+ Sbjct: 225 VLHNRYLR---------NEDVQRFYSQEICESCNGYRICDEARMMKIANLHLGEIASMSL 275 Query: 437 GHAMEFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIR 496 EF +N + + ++ + + L L+++ L +LT+ R TLSGGE QRI Sbjct: 276 IKVKEFLDNYIEMNKLSAFGTELSRSLITTLNSLIHIKLGHLTMYREIPTLSGGELQRIF 335 Query: 497 LASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADH 556 L + + L ++YV DEP+ GLH+ + + ++ +L ++ GNTV++V HD+ I+AADH Sbjct: 336 LYDHLESKLDSLIYVFDEPTSGLHESEKQEIIESLQSIKAHGNTVLIVSHDKKIIKAADH 395 Query: 557 VIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEVPKKRVPANPEKVLKLT 616 +ID+G AG GGE+V +G + SLT +++ K + + L ++ Sbjct: 396 IIDVGTNAGDLGGEIVYQGSYSEFLNNRHSLTSKFLDYDMTKSFKKNK--QKTKDTLSIS 453 Query: 617 GARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAEPAPYRDI 676 A NNLK++++ +P+ I GVSGSGKSTLI+ TL P+ + QL + + P +I Sbjct: 454 NANRNNLKNISIEIPINRLVGIAGVSGSGKSTLISKTLVPLCKEQLKNSDFSNP----NI 509 Query: 677 QGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESRARGYTPGRFSFNVR 736 +G++ K+I+I Q+PIGR SNP TY G++ +RELFA P++ G G FSFN Sbjct: 510 KGMDKIQKIIEISQAPIGRKANSNPVTYIGLWDKIRELFAKQPQAVKEGLKAGDFSFNSN 569 Query: 737 GGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKYKGKTI 785 G C +C+G GV + + + C +C G R+N +TL++ YK K + Sbjct: 570 GA-CLSCKGSGVEDISIGYDIQFSKTCPECNGTRFNSKTLQVLYKKKIL 617 Score = 102 bits (255), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 60/189 (31%), Positives = 98/189 (51%), Gaps = 17/189 (8%) Query: 763 CDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAV----------PALARKLQT 812 C+ C G R E +K + E+ M++ + +EF D L+R L T Sbjct: 245 CESCNGYRICDEARMMKIANLHLGEIASMSLIKVKEFLDNYIEMNKLSAFGTELSRSLIT 304 Query: 813 LMDVGLTYIRLGQSAT-----TLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFAD 867 ++ L +I+LG TLSGGE QR+ L L + +Y+ DEPT+GLH ++ Sbjct: 305 TLN-SLIHIKLGHLTMYREIPTLSGGELQRIFLYDHLESK-LDSLIYVFDEPTSGLHESE 362 Query: 868 IQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAEC 927 Q++++ L ++ GNT++++ H+ +IK AD I+D+G G GGEI+ G+ Sbjct: 363 KQEIIESLQSIKAHGNTVLIVSHDKKIIKAADHIIDVGTNAGDLGGEIVYQGSYSEFLNN 422 Query: 928 EASHTARFL 936 S T++FL Sbjct: 423 RHSLTSKFL 431 Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 52/118 (44%), Positives = 79/118 (66%), Gaps = 8/118 (6%) Query: 1 MDKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAY 60 MD I++ A +NLKNI++ IP++K IV+TG+SGSGKSSLAFD ++ EG+++Y++S+ Sbjct: 1 MDYIQIENAYINNLKNISIEIPKNKFIVITGISGSGKSSLAFDLIFEEGRKKYLQSIG-- 58 Query: 61 ARQFLSLMEKPD-VDHIEGLSPAISIEQKSTSH-NPRSTVGTITEIHDYLRLLFARVG 116 ++L D +I GLSP ++++Q NPRSTVG+ T + + LLFA G Sbjct: 59 ----MALDFGTDYYTNITGLSPTVAVKQNLIRQSNPRSTVGSKTGLLNKFCLLFANEG 112 Score = 52.8 bits (125), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 44/148 (29%), Positives = 69/148 (46%), Gaps = 16/148 (10%) Query: 613 LKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQ----LNGATIA 668 +++ A NNLK++++ +P F ITG+SGSGKS+L D +F +++ + A Sbjct: 4 IQIENAYINNLKNISIEIPKNKFIVITGISGSGKSSLAFDLIFEEGRKKYLQSIGMALDF 63 Query: 669 EPAPYRDIQGLEHFDKVIDIDQSPIGRT-PRSNPATYTGVFTPVRELFAGV-----PESR 722 Y +I GL + + Q+ I ++ PRS + TG+ LFA ES Sbjct: 64 GTDYYTNITGLS---PTVAVKQNLIRQSNPRSTVGSKTGLLNKFCLLFANEGSYQDSESF 120 Query: 723 ARG---YTPGRFSFNVRGGRCEACQGDG 747 + P FS+ G C C G G Sbjct: 121 SLANDDINPDIFSYLSPNGMCFDCAGTG 148 Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust. Identities = 32/113 (28%), Positives = 53/113 (46%), Gaps = 10/113 (8%) Query: 2 DKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYA 61 D + + A +NLKNI++ IP ++L+ + G+SGSGKS+L TL + + Sbjct: 448 DTLSISNANRNNLKNISIEIPINRLVGIAGVSGSGKSTLISKTLVPLCKEQLKN------ 501 Query: 62 RQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFAR 114 S P++ ++ + I I Q S T + D +R LFA+ Sbjct: 502 ----SDFSNPNIKGMDKIQKIIEISQAPIGRKANSNPVTYIGLWDKIRELFAK 550 >UniRef50_Q4JUN2 Excinuclease ABC, subunit A n=2 Tax=Corynebacterium jeikeium RepID=Q4JUN2_CORJK Length = 923 Score = 284 bits (726), Expect = 1e-74, Method: Compositional matrix adjust. Identities = 170/391 (43%), Positives = 234/391 (59%), Gaps = 22/391 (5%) Query: 562 PGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEVPKKRVPANPEKVLKLTGARGN 621 P G GG VA G A + P TG+ ++ +++ P L LT Sbjct: 533 PDTGGDGGSDVAGGAGLAGLDCP---TGRALAAG-PLKLTTDAEARTPSGTLALTDINAR 588 Query: 622 NLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLN-----------GATIAEP 670 L + + +G FT ITGVSGSGKSTL++ TL + Q+ G + AE Sbjct: 589 TLNSLDVDFGLGTFTAITGVSGSGKSTLLH-TLASSLRDQVKTTVDDGEMASRGTSSAEK 647 Query: 671 APYRDIQGLE-----HFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESRARG 725 + E ++++ I Q PIGRTPRS ATYTG+F VR+LFA E++ RG Sbjct: 648 EGSAETATAELNADIAVNRLVQISQKPIGRTPRSCLATYTGLFDRVRKLFAQTDEAKRRG 707 Query: 726 YTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKYKGKTI 785 +T RFS+NV GRC C G+G I+VE+ FLP Y PC C G RYN ETLE+ + G+TI Sbjct: 708 WTVSRFSYNVTQGRCPTCSGEGQIEVELVFLPGSYTPCPDCHGARYNAETLEVTWNGRTI 767 Query: 786 HEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELS 845 +VL++T+ EARE F A+AR L+ L VGL Y+RLGQ AT LSGGEAQR+KLA EL Sbjct: 768 ADVLELTVAEAREVFAEEGAIARALRALSAVGLDYLRLGQPATELSGGEAQRIKLATELQ 827 Query: 846 KRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADWIVDLG 905 + G T+Y++DEPTTGLH AD+ L+ L +L + GNT+VV+EH++ V AD ++++G Sbjct: 828 RAQRGHTVYLMDEPTTGLHPADVDLLMTELQRLVNNGNTVVVVEHDMRVAAQADRVLEMG 887 Query: 906 PEGGSGGGEILVSGTPETVAECEASHTARFL 936 P G+ GG+++ G+P TVA+ + + T R L Sbjct: 888 PGAGARGGQVVADGSPATVAQTDTA-TGRVL 917 Score = 157 bits (397), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 112/386 (29%), Positives = 180/386 (46%), Gaps = 46/386 (11%) Query: 263 LEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPELSLAGGAIRGWDRRNFYYFQMLK 322 L+ FS N AG CP C G GV + ++ +P LS+ GAI W + + + Sbjct: 138 LDSDSFSPNTTAGMCPECQGTGVVHEPTEESMVPDPSLSIDEGAIAAWP--GAWLGKNFR 195 Query: 323 SLADHYKFDVEAPWGSLSANVHKVVLYGSGKENIEFKYMNDRGDTSIRRHPFEGVLHN-- 380 + F ++ PW + +LY + + RG I+R +EG + Sbjct: 196 DIVAELGFPMDIPWREIPKADRDWILYTDERPVVTIH--PHRGADQIQR-TYEGTWRSVA 252 Query: 381 --MERRYKETESSAVREELAKFISNRPCASCEGTRLRREARHVYVENTPLPAISDMSIGH 438 + + ET S + R + F+ + C C+G RL +A V P+ ++ + + Sbjct: 253 SYLRKTLAETGSDSTRRRVLSFMKSSRCGVCDGRRLIVDALSVGYLGLPIDSLGALPLED 312 Query: 439 AMEFFNNLKLA----------------GQR-------------AKIAEKI-LKEIGDRLK 468 + F + + G+R A AE+I L + L+ Sbjct: 313 VLSRFAERRASMPADTARGQADIYATTGRRLAQHAPAGGDSSAAAEAERILLSQAIPTLE 372 Query: 469 FLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLL 528 +V++GL +L+L R+ TLS GE QR+RLASQ+ +GL GV YVLDEPS GLH + ++ Sbjct: 373 SVVDLGLGHLSLDRATSTLSAGELQRLRLASQLRSGLFGVAYVLDEPSAGLHPEERRAVM 432 Query: 529 GTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLT 588 + D GN+V++VEHD + AD ++D+GPGAG GG+++ GP A P + T Sbjct: 433 RLIRGFLDAGNSVLLVEHDMHLVAEADWIVDVGPGAGELGGKILYSGP-----AAPSTAT 487 Query: 589 GQYMSGKRKIEVPKKRVPANPEKVLK 614 + + E P + AN + L+ Sbjct: 488 ANHNTAAN--EAPARSSSANADAGLR 511 Score = 112 bits (281), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 52/114 (45%), Positives = 80/114 (70%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 63 I VR A NLK+ ++ +PR+ L+ VTG+SGSGKSSLAF TL+ E QRRY+ES++ +AR+ Sbjct: 12 IRVRDAHLRNLKHQDVSLPRNALVAVTGVSGSGKSSLAFGTLHGEAQRRYLESVAPFARR 71 Query: 64 FLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGE 117 + P V +EGL P +++ Q + + RSTVGT++ + + +RLL++R G+ Sbjct: 72 LIGGAVDPRVGSVEGLPPTVALRQGAQAGGARSTVGTVSNLSNTIRLLYSRCGQ 125 Score = 99.8 bits (247), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 73/193 (37%), Positives = 106/193 (54%), Gaps = 16/193 (8%) Query: 402 SNRPCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILK 461 S PC C G R E V + + ++++ A E F AE+ Sbjct: 741 SYTPCPDCHGARYNAETLEVTWNGRTIADVLELTVAEAREVF------------AEE--G 786 Query: 462 EIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVG-VMYVLDEPSIGLH 520 I L+ L VGL+YL L + A LSGGEAQRI+LA+++ G +Y++DEP+ GLH Sbjct: 787 AIARALRALSAVGLDYLRLGQPATELSGGEAQRIKLATELQRAQRGHTVYLMDEPTTGLH 846 Query: 521 QRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAI 580 D + L+ L L + GNTV+VVEHD AD V+++GPGAG GG+VVA+G A Sbjct: 847 PADVDLLMTELQRLVNNGNTVVVVEHDMRVAAQADRVLEMGPGAGARGGQVVADGS-PAT 905 Query: 581 MAVPESLTGQYMS 593 +A ++ TG+ ++ Sbjct: 906 VAQTDTATGRVLA 918 Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 47/122 (38%), Positives = 82/122 (67%), Gaps = 2/122 (1%) Query: 810 LQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQ 869 L++++D+GL ++ L ++ +TLS GE QR++LA +L + G Y+LDEP+ GLH + + Sbjct: 371 LESVVDLGLGHLSLDRATSTLSAGELQRLRLASQL-RSGLFGVAYVLDEPSAGLHPEERR 429 Query: 870 QLLDVLHKLRDQGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEA 929 ++ ++ D GN+++++EH++ ++ ADWIVD+GP G GG+IL SG P + A Sbjct: 430 AVMRLIRGFLDAGNSVLLVEHDMHLVAEADWIVDVGPGAGELGGKILYSG-PAAPSTATA 488 Query: 930 SH 931 +H Sbjct: 489 NH 490 Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 52/177 (29%), Positives = 75/177 (42%), Gaps = 23/177 (12%) Query: 608 NPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATI 667 P+ ++++ A NLK ++LP +TGVSGSGKS+L TL AQR+ + Sbjct: 7 QPDAMIRVRDAHLRNLKHQDVSLPRNALVAVTGVSGSGKSSLAFGTLHGEAQRRY----L 62 Query: 668 AEPAPY--RDIQG--------LEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELF-- 715 AP+ R I G +E + + Q RS T + + +R L+ Sbjct: 63 ESVAPFARRLIGGAVDPRVGSVEGLPPTVALRQGAQAGGARSTVGTVSNLSNTIRLLYSR 122 Query: 716 -----AGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIK--VEMHFLPDIYVPCDQ 765 AGV E FS N G C CQG GV+ E +PD + D+ Sbjct: 123 CGQYPAGVRERHGGRLDSDSFSPNTTAGMCPECQGTGVVHEPTEESMVPDPSLSIDE 179 >UniRef50_B6W739 Putative uncharacterized protein n=1 Tax=Anaerococcus hydrogenalis DSM 7454 RepID=B6W739_9FIRM Length = 269 Score = 261 bits (667), Expect = 9e-68, Method: Composition-based stats. Identities = 118/200 (59%), Positives = 155/200 (77%), Gaps = 1/200 (0%) Query: 623 LKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAEPAPYRDIQGLEHF 682 +K + + P+ FT +TGVSGSGKS+L+N+ L+ ++LN + P + I+G+E Sbjct: 1 MKGIDVKFPLSTFTAVTGVSGSGKSSLVNEILYKSVTKKLNKSK-THPGKHDSIEGVEQI 59 Query: 683 DKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESRARGYTPGRFSFNVRGGRCEA 742 DK+I IDQSPIGRTPRSNPATYT +F +R++FA E++ +G+ GRFSFNV+GGRCEA Sbjct: 60 DKIISIDQSPIGRTPRSNPATYTKLFDNIRDVFAMTTEAKMKGFDKGRFSFNVKGGRCEA 119 Query: 743 CQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDA 802 C+GDG IKV+M FLPD+YVPC+ C G+RYNRETLE+KYKGK I EVLDMT+EEA +FF+ Sbjct: 120 CKGDGTIKVDMMFLPDVYVPCEVCHGQRYNRETLEVKYKGKNISEVLDMTVEEALKFFEN 179 Query: 803 VPALARKLQTLMDVGLTYIR 822 P++ RKLQTL DVGL YI+ Sbjct: 180 HPSIVRKLQTLYDVGLGYIK 199 Score = 52.8 bits (125), Expect = 6e-05, Method: Composition-based stats. Identities = 33/111 (29%), Positives = 53/111 (47%), Gaps = 7/111 (6%) Query: 14 LKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQFLSLMEKPDV 73 +K I++ P VTG+SGSGKSSL + LY ++ +S + + + Sbjct: 1 MKGIDVKFPLSTFTAVTGVSGSGKSSLVNEILYKSVTKKLNKSKTHPGKH-------DSI 53 Query: 74 DHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCPDHD 124 + +E + ISI+Q PRS T T++ D +R +FA E + D Sbjct: 54 EGVEQIDKIISIDQSPIGRTPRSNPATYTKLFDNIRDVFAMTTEAKMKGFD 104 >UniRef50_C1ZCR5 Excinuclease ATPase subunit n=1 Tax=Planctomyces limnophilus DSM 3776 RepID=C1ZCR5_PLALI Length = 844 Score = 252 bits (644), Expect = 4e-65, Method: Compositional matrix adjust. Identities = 159/473 (33%), Positives = 234/473 (49%), Gaps = 24/473 (5%) Query: 457 EKILKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPS 516 + + + + R+++ +GL++L L RS LSG E +R RL + AGLV +Y+LDEP Sbjct: 395 QSLWEHVLQRIEWCRRLGLDHLPLFRSVSGLSGTEYRRARLIPLLSAGLVNTLYILDEPL 454 Query: 517 IGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGP 576 GL + +L + L GN++++VEH A + A+ VI++GPGAG GG +V G Sbjct: 455 AGLDDQTACIVLDAIQSLLKSGNSLLMVEHHPLAKKRANFVIEMGPGAGSEGGRIVYAGS 514 Query: 577 LEAIMAVPESLTGQYMSGKRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFT 636 A Q ++++ RV P + NL+ LP+GL Sbjct: 515 SPA--------PTQPWPEHDQVKLTAPRVLREPAGWIDPGPINLKNLQQFQWKLPLGLLC 566 Query: 637 CITGVSGSGKSTLINDTLFPIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRT 696 +TG GSGKS + D L P + A P + +D SP+ Sbjct: 567 VVTGPHGSGKSAALIDALQPTSHGDTLPALAGHP--------------LWMVDSSPLKGQ 612 Query: 697 PRSNPATYTGVFTPVRELFAGVPESRARGYTPGRFSFNV-RGGRCEACQGDGVIKVEMHF 755 P +F VR LF PE++ R T FS +V + GRC C+G G I ++ F Sbjct: 613 PSQMLIGLLDLFGEVRALFGQTPEAKNRQLTARFFSLHVAQSGRCSQCKGTGQISADLTF 672 Query: 756 LPDIYVPCDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMD 815 + + C C GKRY R+ LEI+Y+G I E LD+T+ EA +F L L TL Sbjct: 673 FNEASMTCPNCHGKRYRRDALEIRYRGLNIAEALDLTVAEALTYFKGHHKLQSMLTTLSR 732 Query: 816 VGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVL 875 GL Y+RLGQ+ +LSGGE QR+KLA L + ++I DEPT GLH D QL+ Sbjct: 733 TGLRYLRLGQTLKSLSGGERQRIKLALALGQ-PVENGIFICDEPTMGLHDQDAHQLMHAF 791 Query: 876 HKLRDQGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECE 928 +L G+T+ + + + + ADW++ LG + E+L SG T + E Sbjct: 792 LELVSIGHTVWLADIHPVALSWADWVIQLGSQTPLTLPEVLFSGPATTFRQSE 844 Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 95/303 (31%), Positives = 138/303 (45%), Gaps = 58/303 (19%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 63 I +R HNL+ +++ IP +L+VV+G+SGSGKSSLAFDTL+AEGQR Y+E+ S RQ Sbjct: 6 ILIRNLYVHNLQGVDIEIPLQQLVVVSGVSGSGKSSLAFDTLFAEGQRSYIETFSLATRQ 65 Query: 64 FLSLMEKPDVDHIEGLSPAISIEQ-KSTSHNPRS------TVGTITEIHDYLRLLFARVG 116 L E+P VD +E + P I++ Q T RS G++T I D+L+LLF R G Sbjct: 66 LLEKFERPAVDRLENIPPTIALRQLAQTGDKSRSQYVDAQNFGSVTSIADHLKLLFLRCG 125 Query: 117 EPRCPDHDVPLAAQTVSQMVDNVLSQPEGKRLMLL------------------------- 151 CP + + + +++ + P+G R+++ Sbjct: 126 SVICPTCQRKITSSSPAEVAQRLAKLPQGTRILVTMKVPEKSALQLSFDSQTAGPSRNST 185 Query: 152 ---APIIKERKGEHTKTLENLASQGYIRARIDGEVCDLSD-----------PPKLELQKK 197 AP + H +E L QG+ R E LS+ P EL Sbjct: 186 KRTAPPRLPTEKAHQALIEELRQQGFRRGLFQTEA--LSENFVTHEFSKDLPQHFEL--- 240 Query: 198 HTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVADMDDPKAEELLFSANFACPICG 257 + V+VDR +R+ ES ETA+ G A+ P E SA AC I G Sbjct: 241 --VAVIVDRLIAGSQTIERMLESCETAMRYGAG-AIGLWAQTPLPE----SAYLACTIDG 293 Query: 258 YSM 260 + Sbjct: 294 QAW 296 Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 51/171 (29%), Positives = 86/171 (50%), Gaps = 14/171 (8%) Query: 406 CASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGD 465 C +C G R RR+A + + D+++ A+ +F K ++ Sbjct: 680 CPNCHGKRYRRDALEIRYRGLNIAEALDLTVAEALTYF--------------KGHHKLQS 725 Query: 466 RLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNE 525 L L GL YL L ++ ++LSGGE QRI+LA +G + +++ DEP++GLH +D Sbjct: 726 MLTTLSRTGLRYLRLGQTLKSLSGGERQRIKLALALGQPVENGIFICDEPTMGLHDQDAH 785 Query: 526 RLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGP 576 +L+ + L +G+TV + + A+ AD VI +G + EV+ GP Sbjct: 786 QLMHAFLELVSIGHTVWLADIHPVALSWADWVIQLGSQTPLTLPEVLFSGP 836 >UniRef50_UPI00019113E5 excinuclease ABC subunit A n=2 Tax=Salmonella enterica subsp. enterica serovar Typhi RepID=UPI00019113E5 Length = 175 Score = 241 bits (615), Expect = 1e-61, Method: Compositional matrix adjust. Identities = 114/122 (93%), Positives = 118/122 (96%) Query: 340 SANVHKVVLYGSGKENIEFKYMNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAK 399 SANVHKVVLYGSGKENIEFKYMNDRGDTS+RRHPFEGVLHNMERRYKETESSAVREELAK Sbjct: 2 SANVHKVVLYGSGKENIEFKYMNDRGDTSVRRHPFEGVLHNMERRYKETESSAVREELAK 61 Query: 400 FISNRPCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKI 459 FISNRPCASCEGTRL REARHV+VENTPLPAISDMSIGHAM+FF NLKL+GQRAKIAEK Sbjct: 62 FISNRPCASCEGTRLNREARHVFVENTPLPAISDMSIGHAMDFFTNLKLSGQRAKIAEKS 121 Query: 460 LK 461 K Sbjct: 122 AK 123 >UniRef50_C6CND4 ABC transporter related n=1 Tax=Dickeya zeae Ech1591 RepID=C6CND4_DICZE Length = 711 Score = 208 bits (530), Expect = 7e-52, Method: Compositional matrix adjust. Identities = 184/652 (28%), Positives = 290/652 (44%), Gaps = 81/652 (12%) Query: 270 FNNPAGACPTCDGLGVQQYFDPDRVIQNPELSLAGGAIRGWDRRNF--YYFQMLKSLADH 327 N ACP C GLG D D +I N L W YY Q+L + Sbjct: 122 LNKYENACPHCRGLGETHEVDEDELI-NEGCRLDEKPFSCWKNGELADYYNQLLLAYCQR 180 Query: 328 YKFDVEAPWGSLSANVHKVVLYGSGKENIEFKYMNDRGDTSIRRHPFEGVLHNMERRYKE 387 + + SL+ +LYG+ +E I F+ +G RR ++GV+ Sbjct: 181 KNINTSKSFSSLNQEEKNALLYGNSEEKITFR-CKHKGKIKQRRAFYKGVILYANEN--- 236 Query: 388 TESSAVREELAKFISNRPCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLK 447 V + +K+ C C+G+R+ ++ + V IG E F +L Sbjct: 237 -----VSRKQSKYQKETTCYFCKGSRVNQKTAQLDV------------IGLTFENFLSLP 279 Query: 448 LAGQRAKIAEKILKEIGDR-LKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLV 506 ++ I E + I R L + N+GL YL LSRS +LSGGE Q++ + + + + Sbjct: 280 VSKLCEVIKEACEESILLRVLSSIDNIGLGYLNLSRSIPSLSGGELQKLMFSRLLTSNIS 339 Query: 507 GVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGV 566 G++ V+DE S ++ D +L + L + NT+++ EH++ I AD IG AG Sbjct: 340 GILIVIDEISSQVNPIDYPDILSKIKKLSE-KNTLVLTEHNQCFIDNADVSFHIGKQAGS 398 Query: 567 HGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEVPKKRVPANPEKVLKLTGARGNNLKDV 626 GGE+ E I A+P + + KI NN+ + Sbjct: 399 AGGEICQP---EVIQALPNK------NNRNKIS-----------DFFHFEDLNKNNIINQ 438 Query: 627 TLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAEPAPYRDIQGLEHFDKVI 686 ++ +P T +G+SGSGKS+L I E + I Sbjct: 439 SVKIPKECVTIFSGISGSGKSSL--------------AKAICEAT------------ESI 472 Query: 687 DIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESRARGYTPGRFSFNVRGGRCEACQGD 746 + Q T RS+ A+ T + + E F S+ G + G F + GG C+AC G Sbjct: 473 YVSQKSPSYTGRSSVASITELNKIIAEYF-----SQKTGLSAGYFLPHKEGG-CKACNGT 526 Query: 747 GVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIK--YKGKTIHEVLDMTIEEAREFFDAVP 804 G+IK+E F DIY+PCD C G ++ + E+ G I EV D +++ FF Sbjct: 527 GIIKLERGFEKDIYIPCDTCNGSLFDPDVSEVTTPVNGMNIVEVYDAELKDISTFFQD-D 585 Query: 805 ALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLH 864 + + L T+ +GL++++L + +LSGGE +R+KL LSK L +DEPT GL Sbjct: 586 KINQILSTIAALGLSHLKLNRKTQSLSGGEMRRIKLCEILSKTRKTSKLLFIDEPTAGLD 645 Query: 865 FADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEIL 916 ++L+ +++ N IV+IEH + AD+ V +GP G GG++L Sbjct: 646 PETASKVLNFIYRKAGLFNAIVIIEHRPEAEDYADFKVSIGPCAGEQGGKVL 697 Score = 75.9 bits (185), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 48/123 (39%), Positives = 70/123 (56%), Gaps = 6/123 (4%) Query: 1 MDKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAY 60 M I +G THNLKNI++ IP +K+ V+ G SG+GKSSLAF ++Y + + S Y Sbjct: 1 MKNIIFKGMETHNLKNISINIPLNKVTVIYGRSGAGKSSLAFSSIYQLCKDEFDAVESGY 60 Query: 61 ARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRC 120 + S + D D GL PA++I Q++T+ NPRST+ + I L L A+ Sbjct: 61 LNE--SNYKIADYD---GLIPAVAIPQRNTNTNPRSTIYSYLNIPQALYSLKAKYNS-SI 114 Query: 121 PDH 123 PD+ Sbjct: 115 PDY 117 Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 48/181 (26%), Positives = 82/181 (45%), Gaps = 18/181 (9%) Query: 405 PCASCEGTRLRREARHVY--VENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKE 462 PC +C G+ + V V + + D + FF + K Sbjct: 542 PCDTCNGSLFDPDVSEVTTPVNGMNIVEVYDAELKDISTFFQDDK--------------- 586 Query: 463 IGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAG-LVGVMYVLDEPSIGLHQ 521 I L + +GL++L L+R ++LSGGE +RI+L + + +DEP+ GL Sbjct: 587 INQILSTIAALGLSHLKLNRKTQSLSGGEMRRIKLCEILSKTRKTSKLLFIDEPTAGLDP 646 Query: 522 RDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIM 581 ++L + L N ++++EH +A AD + IGP AG GG+V+A+ + I Sbjct: 647 ETASKVLNFIYRKAGLFNAIVIIEHRPEAEDYADFKVSIGPCAGEQGGKVLAQKAIHPIS 706 Query: 582 A 582 + Sbjct: 707 S 707 >UniRef50_A2V167 ABC transporter related n=1 Tax=Shewanella putrefaciens 200 RepID=A2V167_SHEPU Length = 1242 Score = 197 bits (502), Expect = 1e-48, Method: Compositional matrix adjust. Identities = 164/531 (30%), Positives = 248/531 (46%), Gaps = 72/531 (13%) Query: 400 FISNRPCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKI 459 FI+ CASC+G+ +AR V V L M+ + N +K A + Sbjct: 378 FITKEACASCQGSGFGWQARAVRVNGYSLHEYLAMNGKQFHQRINEIK-------TAHPL 430 Query: 460 LKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGL 519 L ++ LK+L + + +++ R TLS GE QR++L + + +++LDEPS L Sbjct: 431 LTQLKHLLKYLHALSIEHISFERPLTTLSSGELQRMKLLPALVENVSQRLFILDEPSSNL 490 Query: 520 HQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEA 579 +DN ++G L ++ GN +++VEH+ AD V+ IGP AG GG+ + P Sbjct: 491 QFKDNLAIIGILKTIQAKGNGILLVEHNPLYQVYADRVLCIGPKAGAGGGD-YCQAP--- 546 Query: 580 IMAVPESLTGQYMSGKRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCIT 639 + + L G +SG K P ++ L L +++ L+LP + Sbjct: 547 --TIEQQLQGLSISG--------KIAPTETQERLSLVLQPTRHIQLTQLSLPKNAINTVI 596 Query: 640 GVSGSGKSTLINDTLFP-IAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPR 698 G SGSGKSTL + L+P +AQ + + V +D P Sbjct: 597 GASGSGKSTLCREMLYPALAQEKYS---------------------VELLDSRPFAGAAN 635 Query: 699 SNPATYTGVFTPVRELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKV---EMHF 755 S ATY GVF +R+ F+ + + YT FSFN GG CE C+G GV+++ Sbjct: 636 SIVATYLGVFDELRQFFSAQSQGQ---YTTNDFSFNA-GGACEHCEGKGVVEIGSGSGSG 691 Query: 756 LPDIYVPCDQCKGKRYNRET----LEIKYKGKTIHEVL--DMTIEEAREFFDAVPALARK 809 + C C G R+ E EI K T+ +VL D T ++ + L Sbjct: 692 KDIVKQTCPVCFGSRFRAEIALFHAEIDKKPVTLPQVLTSDFTWIASQ---TDLAKLHTA 748 Query: 810 LQTLMDVGLTYIRLGQSATTLSGGEAQRVKLAREL----------SKRG--TGQTLYILD 857 + TL + L ++ LG+ TLSGGE QR+KLAR L SKR + Q + ILD Sbjct: 749 IATLEVLSLGHLHLGRETQTLSGGELQRLKLARFLLTHWLNTKSTSKRAADSQQQVVILD 808 Query: 858 EPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADWIVDLGPEG 908 EP GL + +L+ +L + T++VIEHN I +D+IVDLG G Sbjct: 809 EPCRGLDSQAVTRLVGILREHISHC-TLIVIEHNPYFIYQSDYIVDLGRSG 858 Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 52/167 (31%), Positives = 87/167 (52%), Gaps = 8/167 (4%) Query: 763 CDQCKGKRYNRETLEIKYKGKTIHEVLDMT-------IEEAREFFDAVPALARKLQTLMD 815 C C+G + + ++ G ++HE L M I E + + L L+ L Sbjct: 384 CASCQGSGFGWQARAVRVNGYSLHEYLAMNGKQFHQRINEIKTAHPLLTQLKHLLKYLHA 443 Query: 816 VGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVL 875 + + +I + TTLS GE QR+KL L + Q L+ILDEP++ L F D ++ +L Sbjct: 444 LSIEHISFERPLTTLSSGELQRMKLLPALVE-NVSQRLFILDEPSSNLQFKDNLAIIGIL 502 Query: 876 HKLRDQGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPE 922 ++ +GN I+++EHN AD ++ +GP+ G+GGG+ + T E Sbjct: 503 KTIQAKGNGILLVEHNPLYQVYADRVLCIGPKAGAGGGDYCQAPTIE 549 >UniRef50_C9RP94 Excinuclease ATPase subunit-like protein n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RP94_FIBSS Length = 708 Score = 171 bits (432), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 162/653 (24%), Positives = 280/653 (42%), Gaps = 74/653 (11%) Query: 264 EPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPELSLAGGAIRGWDRRNFYYFQMLKS 323 E F N CP C GLG + D +++ + + W+ ++ ML Sbjct: 115 EYGFFVLNKKENVCPVCKGLGFVKRLDQTKIVDVKKKIKDV-PFKPWNTHKDFFSGMLNF 173 Query: 324 LADHYKFDVEAPWGSLSANVHKVVLYGSGKENIEFKYMNDRGDTSIRRHPFEGVLHNMER 383 + D + +G L + K +LYG G + +Y G + R + GV+ + Sbjct: 174 FCEEKHIDCDCEFGKLPFELQKKLLYGEGLKKYSVRY-KTLGRFARRTCRYFGVMTGVPM 232 Query: 384 RYKETESSAVREELAKFISNRPCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFF 443 +S++ E + S+ C C G + ++ R + V + + + S + +E+ Sbjct: 233 ----LRTSSISEN---YYSDFTCEECNGEKYAKKYRELTVCGLSIGEVLNKSFENVVEWA 285 Query: 444 NNLKLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGA 503 + + G R +K+I LK + + L YL L+RS +LSGGE QR+RL + Sbjct: 286 SEV---GLRFPSMMFSVKKIIAFLKKSIELNLAYLNLNRSIPSLSGGELQRLRLVQIFNS 342 Query: 504 GLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPG 563 + + VLDEP GL + + + + +++L+ +T++V++H E+ I+AA +VI Sbjct: 343 QIKNTLVVLDEPLAGLSKTEKDVVEKNILNLKK-NHTILVIDHHENFIKAASNVI----- 396 Query: 564 AGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEVPKKRVPANPEKVLKLTGARGNN- 622 A+ L G+ + K+ ++ V V+ + R ++ Sbjct: 397 ---------------ALGEGGGKLGGKLVDYKKYLKSQNVNVAWIKRPVVDVRDYRIDHP 441 Query: 623 ---LKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAEPAPYRDIQGL 679 K V + L G I G SG GKS L+ + FP Sbjct: 442 IYQFKGVDVNLAYGRSNLIMGASGIGKSILLRE-YFP----------------------- 477 Query: 680 EHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESRARGYTPGRFSF-NVRG- 737 FDK + + Q + S AT VF + LFA + Y+ + F N+ G Sbjct: 478 RIFDKYVYVSQKSLVGNSHSFVATVLDVFGEIIGLFA-------KKYSKKKTFFSNLVGS 530 Query: 738 -GRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEA 796 G C C G GVI + ++ C +C G +N E + GK I ++ MTI+EA Sbjct: 531 EGACPECSGSGVIIYNQNRNEEVSFVCAKCMGTGFNTELKKYFINGKNIFDLWQMTIDEA 590 Query: 797 REFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYIL 856 +FF + L+ + L ++ LGQ+ ++LSGGE R+KLA+ +Y + Sbjct: 591 ADFFANNAKIEIPLKNAQKLLLGHLTLGQNTSSLSGGENVRIKLAQ---IHKISVDVYGI 647 Query: 857 DEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADWIVDLGPEGG 909 DEP GL +I + ++ ++G T+ V++H K D + +L + G Sbjct: 648 DEPFKGLSKTEIHAVASYINSFVEEGKTVAVVDHEECAEKYFDSLYELINKNG 700 Score = 52.8 bits (125), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 35/114 (30%), Positives = 61/114 (53%), Gaps = 5/114 (4%) Query: 2 DKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYA 61 + I V+ T+NLK I++ I ++ + ++ G SGSGKSSLA+DT+ G + S + Sbjct: 3 EDIVVKEISTNNLKGISVHIKKNAINIIVGPSGSGKSSLAYDTIAEIGLQELNSMYSDFG 62 Query: 62 RQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARV 115 + K V + + ++Q + ++N RST+GT I Y+ +F+ V Sbjct: 63 GE-----PKYCVGEYHNILVTVPVKQINNNNNVRSTIGTYFNIVPYVINIFSFV 111 Score = 45.1 bits (105), Expect = 0.014, Method: Compositional matrix adjust. Identities = 38/138 (27%), Positives = 59/138 (42%), Gaps = 20/138 (14%) Query: 621 NNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAEPAPYRDIQGL- 679 NNLK +++ + I G SGSGKS+L DT+ I ++LN + Y D G Sbjct: 13 NNLKGISVHIKKNAINIIVGPSGSGKSSLAYDTIAEIGLQELN-------SMYSDFGGEP 65 Query: 680 -----EHFDKVIDIDQSPIGRTP--RSNPATYTGVFTPVRELFAGVPESRARGYTPGRFS 732 E+ + ++ + I RS TY + V +F+ V + G F Sbjct: 66 KYCVGEYHNILVTVPVKQINNNNNVRSTIGTYFNIVPYVINIFSFVLKKEY-----GFFV 120 Query: 733 FNVRGGRCEACQGDGVIK 750 N + C C+G G +K Sbjct: 121 LNKKENVCPVCKGLGFVK 138 >UniRef50_A7BNZ1 Excinuclease ABC subunit A n=1 Tax=Beggiatoa sp. SS RepID=A7BNZ1_9GAMM Length = 146 Score = 147 bits (372), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 80/145 (55%), Positives = 94/145 (64%), Gaps = 21/145 (14%) Query: 166 LENLASQGYIRARIDGEVCDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETAL 225 LE+L QG+IRA IDGE+ L D P L+ KKHTIEVVVDRFKVRDDL RLAESFET L Sbjct: 2 LESLQKQGFIRALIDGEIVLLDDVPPLDSYKKHTIEVVVDRFKVRDDLQLRLAESFETVL 61 Query: 226 ELSGGTAVVADMDD------------------PKAE---ELLFSANFACPICGYSMRELE 264 +L G A ++ M + PK E +++FS+NFACP C YS+ ELE Sbjct: 62 KLGEGLAQISLMPEEAKPQKSGVKRHKSGNRQPKKEAISDIIFSSNFACPECNYSLGELE 121 Query: 265 PRLFSFNNPAGACPTCDGLGVQQYF 289 P LFSFNNP GACP DGL +Q F Sbjct: 122 PLLFSFNNPVGACPIRDGLCLQSIF 146 >UniRef50_A9VGN1 ABC transporter related n=62 Tax=Bacillaceae RepID=A9VGN1_BACWK Length = 1056 Score = 124 bits (310), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 97/321 (30%), Positives = 155/321 (48%), Gaps = 36/321 (11%) Query: 613 LKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLIND----------TLFPIAQRQL 662 +K+ NN+ + +P I G+SGSGK+TL +L P A+ Q Sbjct: 1 MKVNQLIANNINKLDTVIPFNKSLGIAGLSGSGKTTLCQTIGEESKKRLVSLLPKAEYQY 60 Query: 663 NGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESR 722 I E + I+ +E V+ + +S I PRS T+TGVF +RE A Sbjct: 61 LFPNIME-TNFSAIK-MEEMPLVLFLGKSSISSNPRSTIGTHTGVFKEIREKLA-----E 113 Query: 723 ARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRE----TLEI 778 +P FSFN + G C C+G G K + C +CKGKRY+ E T+E+ Sbjct: 114 EFNLSPEVFSFNNQLGWCAGCKGRGTTK---------NIECKKCKGKRYSEEVEQRTIEL 164 Query: 779 KYKGKTIHEVLDMTIEEA---REFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEA 835 + TI ++ D+++E E + A LQ ++++ + Y+ L + TLSGGE Sbjct: 165 FAESHTISDINDLSVESILSLAEELNISEAKQHILQNIINMNIGYLTLNRIMGTLSGGEL 224 Query: 836 QRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVI 895 R+ LA ++ + + I+DE + GL + Q+L+ + KL + N I +I+H+ V+ Sbjct: 225 TRLYLAEFMAV--SENAVIIIDEISVGLDHETLLQILEEIEKLGCK-NQIWLIDHSDTVL 281 Query: 896 KTADWIVDLGPEGGSGGGEIL 916 T D + GP G GG+I+ Sbjct: 282 DTTDEQMFFGPGSGKYGGKIV 302 Score = 95.5 bits (236), Expect = 8e-18, Method: Compositional matrix adjust. Identities = 69/258 (26%), Positives = 114/258 (44%), Gaps = 40/258 (15%) Query: 403 NRPCASCEGTRLRREARH----VYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEK 458 N C C+G R E ++ E+ + I+D+S+ + L ++ + I + Sbjct: 142 NIECKKCKGKRYSEEVEQRTIELFAESHTISDINDLSVESILSLAEELNISEAKQHILQN 201 Query: 459 ILKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIG 518 I +N+ + YLTL+R TLSGGE R+ LA + V+ ++DE S+G Sbjct: 202 I-----------INMNIGYLTLNRIMGTLSGGELTRLYLAEFMAVSENAVI-IIDEISVG 249 Query: 519 LHQRDNERLLGTLIHLRDLG--NTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGP 576 L D+E LL L + LG N + +++H + + D + GPG+G +GG++V E P Sbjct: 250 L---DHETLLQILEEIEKLGCKNQIWLIDHSDTVLDTTDEQMFFGPGSGKYGGKIVKESP 306 Query: 577 LEAIMAVPESLTGQYMSGKRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFT 636 R + +R P + N++ +P Sbjct: 307 -------------------RPKPILSERNYEMPTEYYTFHELYCRNIQMTEFQIPKNRLV 347 Query: 637 CITGVSGSGKSTLINDTL 654 +TG SG GKSTL+N+ L Sbjct: 348 TVTGESGCGKSTLVNECL 365 Score = 73.2 bits (178), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 49/136 (36%), Positives = 76/136 (55%), Gaps = 6/136 (4%) Query: 776 LEIKYKGKTIHEVLDMTIEEARE-FFDAVP---ALARKLQTLMDVGLTYIRLGQSATTLS 831 L+IK K E +D E + E D +P ++L L+ +GL Y+ L + TLS Sbjct: 399 LDIKKKLTKYSEEIDDIFERSIEDIIDEIPNEDIAYKRLSLLIKLGLGYLTLERKTQTLS 458 Query: 832 GGEAQRVKLAREL-SKRGTGQTLYILDEPTTGLHFADIQQLLDVLHK-LRDQGNTIVVIE 889 GE Q V L EL +K TL+I DEP+ GL + Q +D + L+D+ +I++IE Sbjct: 459 TGEFQCVHLVSELFAKTRNPHTLFIFDEPSKGLSQNILNQFIDSVRGILQDESVSIIMIE 518 Query: 890 HNLDVIKTADWIVDLG 905 HN +++++D+IVD G Sbjct: 519 HNSYMLESSDYIVDFG 534 Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 34/99 (34%), Positives = 59/99 (59%), Gaps = 3/99 (3%) Query: 466 RLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVG--VMYVLDEPSIGLHQRD 523 RL L+ +GL YLTL R +TLS GE Q + L S++ A +++ DEPS GL Q Sbjct: 436 RLSLLIKLGLGYLTLERKTQTLSTGEFQCVHLVSELFAKTRNPHTLFIFDEPSKGLSQNI 495 Query: 524 NERLLGTLIH-LRDLGNTVIVVEHDEDAIRAADHVIDIG 561 + + ++ L+D ++I++EH+ + ++D+++D G Sbjct: 496 LNQFIDSVRGILQDESVSIIMIEHNSYMLESSDYIVDFG 534 Score = 50.1 bits (118), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 35/109 (32%), Positives = 60/109 (55%), Gaps = 4/109 (3%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 63 ++V +N+ ++ VIP +K + + GLSGSGK++L T+ E ++R V L Q Sbjct: 1 MKVNQLIANNINKLDTVIPFNKSLGIAGLSGSGKTTLC-QTIGEESKKRLVSLLPKAEYQ 59 Query: 64 FL--SLMEKP-DVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLR 109 +L ++ME +E + + + + S S NPRST+GT T + +R Sbjct: 60 YLFPNIMETNFSAIKMEEMPLVLFLGKSSISSNPRSTIGTHTGVFKEIR 108 >UniRef50_D1ZX13 C-terminus not complete (Fragment) n=1 Tax=Sordaria macrospora RepID=D1ZX13_SORMA Length = 567 Score = 123 bits (309), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 56/101 (55%), Positives = 80/101 (79%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 63 ++VRGAR +NLKNI++ +PRD +V TG+SGSGKSSLAF TLYAE QRRY+ES++ YAR+ Sbjct: 464 VQVRGARQNNLKNIDVDVPRDAFVVFTGISGSGKSSLAFGTLYAEAQRRYLESVAPYARR 523 Query: 64 FLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEI 104 + P+VD I+GL PA++++Q+ S N RS+VG++T + Sbjct: 524 LIDQAGVPEVDAIDGLPPAVALQQQRGSANARSSVGSVTTL 564 Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 34/91 (37%), Positives = 48/91 (52%), Gaps = 14/91 (15%) Query: 593 SGKRKIEVPKKRVPAN----------PEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVS 642 SG RK E+ K + A P +++ GAR NNLK++ + +P F TG+S Sbjct: 434 SGGRKTELKSKDIHATTPATDHGHTGPPACVQVRGARQNNLKNIDVDVPRDAFVVFTGIS 493 Query: 643 GSGKSTLINDTLFPIAQRQLNGATIAEPAPY 673 GSGKS+L TL+ AQR+ + APY Sbjct: 494 GSGKSSLAFGTLYAEAQRRY----LESVAPY 520 >UniRef50_C3PL69 Putative ABC transport system n=1 Tax=Corynebacterium aurimucosum ATCC 700975 RepID=C3PL69_CORA7 Length = 195 Score = 118 bits (296), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 70/188 (37%), Positives = 102/188 (54%), Gaps = 8/188 (4%) Query: 759 IYVPCDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFD------AVPALARKLQT 812 ++V C +C+G R + + E G +I EV M + +A + AV L L+ Sbjct: 10 VFVACPECQGTRLAQHSRESYLNGVSIAEVCGMELADAAAWLRTINSPLAVAPLC-GLEA 68 Query: 813 LMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLL 872 +D+GL Y+ LGQ +TLSGGE QR+KLA L R + +LDEPT G H DI LL Sbjct: 69 ALDLGLGYLTLGQPLSTLSGGERQRLKLAVRLCDRKATADIIVLDEPTVGRHHKDIDALL 128 Query: 873 DVLHKLRDQGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHT 932 + L D T++ +EH+ + AD I+DLGP GS GGE++ + +P + + T Sbjct: 129 CLFDTLVDAHLTLICVEHHRAFLAHADHIIDLGPGAGSAGGEVVAACSPREFLGTD-TLT 187 Query: 933 ARFLKPML 940 AR+L L Sbjct: 188 ARYLTQAL 195 Score = 102 bits (254), Expect = 7e-20, Method: Compositional matrix adjust. Identities = 64/189 (33%), Positives = 98/189 (51%), Gaps = 11/189 (5%) Query: 406 CASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGD 465 C C+GTRL + +R Y+ + + M + A + + A + Sbjct: 14 CPECQGTRLAQHSRESYLNGVSIAEVCGMELADAAAWLRTINSPLAVAPLCG-------- 65 Query: 466 RLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIG-AGLVGVMYVLDEPSIGLHQRDN 524 L+ +++GL YLTL + TLSGGE QR++LA ++ + VLDEP++G H +D Sbjct: 66 -LEAALDLGLGYLTLGQPLSTLSGGERQRLKLAVRLCDRKATADIIVLDEPTVGRHHKDI 124 Query: 525 ERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVP 584 + LL L D T+I VEH + ADH+ID+GPGAG GGEVVA + Sbjct: 125 DALLCLFDTLVDAHLTLICVEHHRAFLAHADHIIDLGPGAGSAGGEVVAACSPREFLGT- 183 Query: 585 ESLTGQYMS 593 ++LT +Y++ Sbjct: 184 DTLTARYLT 192 >UniRef50_UPI00016998C1 hypothetical protein Epers_17394 n=1 Tax=Endoriftia persephone 'Hot96_1+Hot96_2' RepID=UPI00016998C1 Length = 109 Score = 118 bits (295), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 50/86 (58%), Positives = 65/86 (75%) Query: 321 LKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKENIEFKYMNDRGDTSIRRHPFEGVLHN 380 + SL HY FD E PW L V K +LYGSG E+IEF Y N+RG ++ + HPFEG++HN Sbjct: 1 ISSLGRHYAFDPETPWQELPRQVQKKILYGSGNESIEFSYFNERGRSTRKTHPFEGIIHN 60 Query: 381 MERRYKETESSAVREELAKFISNRPC 406 M RRY+ET+S+AVREELA +IS++PC Sbjct: 61 MSRRYRETDSNAVREELAHYISSQPC 86 >UniRef50_D0VX13 Geobacillus stearothermophilus UvrA interaction domain n=2 Tax=Bacteria RepID=D0VX13_BACST Length = 119 Score = 112 bits (279), Expect = 9e-23, Method: Compositional matrix adjust. Identities = 59/118 (50%), Positives = 81/118 (68%), Gaps = 3/118 (2%) Query: 131 TVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARIDGEVCDLSDPP 190 T+ QMVD +LS PE ++ +LAPI+ +KG H KTLE++ QGY+R RID E+ +L+ Sbjct: 5 TIEQMVDRLLSYPERTKMQILAPIVSGKKGTHAKTLEDIRKQGYVRVRIDREMRELTGDI 64 Query: 191 KLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVADMDDPKAEELLFS 248 +LE KKH+I+VVVDR ++D + RLA+S ETAL+L+ G VV D ELLFS Sbjct: 65 ELEKNKKHSIDVVVDRIIIKDGIAARLADSLETALKLADGKVVV---DVIGEGELLFS 119 >UniRef50_A8PN67 Excinuclease ABC, A subunit, putative n=1 Tax=Brugia malayi RepID=A8PN67_BRUMA Length = 114 Score = 93.6 bits (231), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 43/55 (78%), Positives = 49/55 (89%) Query: 497 LASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAI 551 ASQIG+GL GV+YVLDEPSIGLHQ DN+RL+ TL +LRD+GNTVIVVEHDED I Sbjct: 38 FASQIGSGLTGVLYVLDEPSIGLHQCDNDRLIATLKNLRDMGNTVIVVEHDEDTI 92 Score = 55.8 bits (133), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 27/53 (50%), Positives = 37/53 (69%), Gaps = 2/53 (3%) Query: 845 SKRGTGQT--LYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVI 895 S+ G+G T LY+LDEP+ GLH D +L+ L LRD GNT++V+EH+ D I Sbjct: 40 SQIGSGLTGVLYVLDEPSIGLHQCDNDRLIATLKNLRDMGNTVIVVEHDEDTI 92 >UniRef50_B9Y318 Putative uncharacterized protein (Fragment) n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y318_9FIRM Length = 143 Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 51/120 (42%), Positives = 67/120 (55%) Query: 365 GDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGTRLRREARHVYVE 424 G+ R EGV +ERR+ ET S+ RE A F++ PC C G RL A V V Sbjct: 4 GNRFSRNDYIEGVKTLIERRFVETTSTMSREWYASFMAESPCPKCGGKRLNEMALSVRVG 63 Query: 425 NTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTLSRSA 484 + + MS+ A++F NL+L RA+IA ++KEI RL FL +VGL YLTL R A Sbjct: 64 GKNIYEWTTMSVIQALDFMKNLQLDPMRAEIARLVIKEIVSRLTFLKDVGLEYLTLDRLA 123 Score = 43.1 bits (100), Expect = 0.055, Method: Compositional matrix adjust. Identities = 24/80 (30%), Positives = 37/80 (46%), Gaps = 14/80 (17%) Query: 762 PCDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFD--------------AVPALA 807 PC +C GKR N L ++ GK I+E M++ +A +F + + Sbjct: 44 PCPKCGGKRLNEMALSVRVGGKNIYEWTTMSVIQALDFMKNLQLDPMRAEIARLVIKEIV 103 Query: 808 RKLQTLMDVGLTYIRLGQSA 827 +L L DVGL Y+ L + A Sbjct: 104 SRLTFLKDVGLEYLTLDRLA 123 >UniRef50_C0W4B4 Putative uncharacterized protein n=1 Tax=Actinomyces urogenitalis DSM 15434 RepID=C0W4B4_9ACTO Length = 173 Score = 83.2 bits (204), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 54/162 (33%), Positives = 91/162 (56%), Gaps = 14/162 (8%) Query: 777 EIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQ 836 I+ +G +H + D+ ++ AV ++ ++ + +G+ Y E Sbjct: 14 HIQVRGARVHNLRDLDVDVPLGQMVAVAGVSGSGKSSLALGVLY------------AEGA 61 Query: 837 RVKLARELSKRGTGQ--TLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDV 894 R L + G+ Q T+++LDEP+ GLH D+Q LL VL +L + G +++VIEH+LD+ Sbjct: 62 RRYLESLSTYLGSSQEGTMFVLDEPSIGLHPLDVQVLLSVLDRLIEDGASVLVIEHDLDM 121 Query: 895 IKTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFL 936 I ADW++DLGP GG GG ++ + TP+ +A+ S T R+L Sbjct: 122 IANADWVIDLGPGGGQEGGRVVAAATPQQLAQAPGSVTGRYL 163 Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 34/57 (59%), Positives = 46/57 (80%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAY 60 I+VRGAR HNL+++++ +P +++ V G+SGSGKSSLA LYAEG RRY+ESLS Y Sbjct: 15 IQVRGARVHNLRDLDVDVPLGQMVAVAGVSGSGKSSLALGVLYAEGARRYLESLSTY 71 Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 49/108 (45%), Positives = 68/108 (62%), Gaps = 2/108 (1%) Query: 497 LASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADH 556 L++ +G+ G M+VLDEPSIGLH D + LL L L + G +V+V+EHD D I AD Sbjct: 68 LSTYLGSSQEGTMFVLDEPSIGLHPLDVQVLLSVLDRLIEDGASVLVIEHDLDMIANADW 127 Query: 557 VIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEVPKKR 604 VID+GPG G GG VVA + + P S+TG+Y++ R + K+R Sbjct: 128 VIDLGPGGGQEGGRVVAAATPQQLAQAPGSVTGRYLA--RHLASQKER 173 >UniRef50_C8VY85 Beta-lactamase n=3 Tax=Clostridiales RepID=C8VY85_DESAS Length = 387 Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 36/51 (70%), Positives = 47/51 (92%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYV 54 IE++GAR +NLKNIN+ IP++KL V+TG+SGSGKSSLAFDTL+ EG+RRY+ Sbjct: 5 IEIKGARINNLKNINIRIPQNKLTVITGVSGSGKSSLAFDTLFEEGKRRYL 55 Score = 52.8 bits (125), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 25/52 (48%), Positives = 37/52 (71%) Query: 610 EKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQ 661 ++ +++ GAR NNLK++ + +P T ITGVSGSGKS+L DTLF +R+ Sbjct: 2 KEFIEIKGARINNLKNINIRIPQNKLTVITGVSGSGKSSLAFDTLFEEGKRR 53 >UniRef50_UPI00017435C2 excinuclease ABC subunit A (UvrA) n=1 Tax=candidate division TM7 single-cell isolate TM7a RepID=UPI00017435C2 Length = 112 Score = 73.2 bits (178), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 47/118 (39%), Positives = 65/118 (55%), Gaps = 12/118 (10%) Query: 206 RFKVRDDLTQRLAESFETALELSGGT--AVVADMDDPKAEELLFSANFAC---PICGYSM 260 R + D+ R+A+S E ALE+ G + AD D+ K + S +A P + Sbjct: 1 RIIMAADMRGRVAQSVEQALEVGNGIIGVLYADTDELK----ILSQRYASIDNP--DIEI 54 Query: 261 RELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPELSLAGGAIRGWDRRNFYYF 318 ELEPRLFS+N P GACP C GLG + DP V+ N L+++ GAIR ++R N F Sbjct: 55 PELEPRLFSYNTPQGACPNCTGLGSRLEIDPSLVLNN-NLTISEGAIRPYNRINVDNF 111 >UniRef50_C0XR98 Possible excinuclease ABC, subunit A n=1 Tax=Corynebacterium lipophiloflavum DSM 44291 RepID=C0XR98_9CORY Length = 382 Score = 72.4 bits (176), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 56/231 (24%), Positives = 106/231 (45%), Gaps = 13/231 (5%) Query: 263 LEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPELSLAGGAIRGWDRRNFYYFQMLK 322 L+ FS N AG CP C G GV ++ +P S+ GAI W + + Sbjct: 62 LDSDAFSPNTTAGMCPKCQGTGVVHRPVESTMVPDPSKSINEGAIAAWP--GAWAGKNFL 119 Query: 323 SLADHYKFDVEAPWGSLSANVHKVVLYGSGKENIEFKYMNDRGDTSIRRH---PFEGVLH 379 ++ D ++++PW L +L+ + + + RG IR+ ++ V + Sbjct: 120 AILDALDVNLDSPWQDLDQKDRDWILFTDERPMVTISPV--RGADQIRKTYKGTWKSVAN 177 Query: 380 NMERRYKETESSAVREELAKFISNRPCASCEGTRLRREARHVYVENTPLPAISDMSIGHA 439 + ET S A+R + +++ C C+G RL +A V + P+ A++ + + Sbjct: 178 CLTDTLHETHSDALRRRVLSYMNQSTCDMCDGRRLTPDALLVTYASLPIDALTALPMDEL 237 Query: 440 M----EFFNNLKLAGQRAKI-AEK-ILKEIGDRLKFLVNVGLNYLTLSRSA 484 + E F+ G+ A+ AE+ +L ++ L+ +V +G+ +L+L R A Sbjct: 238 LAILDERFDPEPKEGEDARDEAERLLLSQLVSTLRTVVELGIEHLSLDRPA 288 Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust. Identities = 21/47 (44%), Positives = 31/47 (65%) Query: 71 PDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGE 117 P V +IEGL P +++EQ TS RS VGT + + +RLL++R G+ Sbjct: 3 PKVGNIEGLPPTVALEQSKTSGGARSIVGTFSTLSSSVRLLYSRCGD 49 >UniRef50_UPI00018540DA excinuclease ABC subunit A n=1 Tax=Helicobacter pylori HPKX_438_CA4C1 RepID=UPI00018540DA Length = 84 Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 34/67 (50%), Positives = 47/67 (70%), Gaps = 1/67 (1%) Query: 540 TVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIE 599 T+IVVEHD++ I+ AD V+DIGP AG HGGEVV G ++ ++ S T Y++G +KIE Sbjct: 1 TLIVVEHDKETIKHADFVVDIGPKAGRHGGEVVFSGSVKELLQNNHS-TALYLNGTKKIE 59 Query: 600 VPKKRVP 606 PK +P Sbjct: 60 RPKFELP 66 Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust. Identities = 22/53 (41%), Positives = 38/53 (71%), Gaps = 1/53 (1%) Query: 884 TIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFL 936 T++V+EH+ + IK AD++VD+GP+ G GGE++ SG+ + + + S TA +L Sbjct: 1 TLIVVEHDKETIKHADFVVDIGPKAGRHGGEVVFSGSVKELLQNNHS-TALYL 52 >UniRef50_C2CQ71 Putative uncharacterized protein n=1 Tax=Corynebacterium striatum ATCC 6940 RepID=C2CQ71_CORST Length = 120 Score = 67.4 bits (163), Expect = 3e-09, Method: Composition-based stats. Identities = 35/84 (41%), Positives = 45/84 (53%), Gaps = 1/84 (1%) Query: 690 QSPIGRTPRSNPATYTGVFTPVRELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVI 749 Q+PI + RSNPATYTG +R+ FA + P FS N G C C G GVI Sbjct: 6 QTPIKGSRRSNPATYTGELDSIRKAFANANSTPDNTVKPALFSANSEGA-CPNCNGTGVI 64 Query: 750 KVEMHFLPDIYVPCDQCKGKRYNR 773 VE F+ + VPC+ C+G+ R Sbjct: 65 YVEFGFMGCVDVPCEVCEGRSLIR 88 >UniRef50_UPI00016931CA Excinuclease ATPase subunit n=1 Tax=Paenibacillus larvae subsp. larvae BRL-230010 RepID=UPI00016931CA Length = 69 Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 27/47 (57%), Positives = 38/47 (80%) Query: 894 VIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLKPML 940 VIKTAD+++DLGPEGG+ GG I+ +GTPE V + E S+T ++L P+L Sbjct: 1 VIKTADYLIDLGPEGGNRGGTIVATGTPEDVVQVEGSYTGQYLSPIL 47 Score = 45.1 bits (105), Expect = 0.014, Method: Compositional matrix adjust. Identities = 21/43 (48%), Positives = 29/43 (67%) Query: 551 IRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMS 593 I+ AD++ID+GP G GG +VA G E ++ V S TGQY+S Sbjct: 2 IKTADYLIDLGPEGGNRGGTIVATGTPEDVVQVEGSYTGQYLS 44 >UniRef50_C8W1V3 ABC transporter related n=1 Tax=Desulfotomaculum acetoxidans DSM 771 RepID=C8W1V3_DESAS Length = 255 Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 54/158 (34%), Positives = 77/158 (48%), Gaps = 16/158 (10%) Query: 777 EIKYKGKTIHEVLDMTIEEAREFFDAVPALA--RKLQTLMD----VGLTYIRLGQSATTL 830 +I Y + D+T+EE F+ V L+ RKLQ VGL RLGQ +L Sbjct: 78 KIGYMSQKFSLYDDLTVEENMNFYAGVYNLSGQRKLQQKQKIIELVGLKE-RLGQLVQSL 136 Query: 831 SGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEH 890 SGG QRV LA L L +LDEPT G+ + ++++ L QG TI+V H Sbjct: 137 SGGWKQRVSLACALLHD---PKLIVLDEPTAGVDPVSRRIFWNIINLLAGQGMTILVSTH 193 Query: 891 NLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECE 928 +D + D+I G G+++ GTP+ + E E Sbjct: 194 YMDEADSCDYI------GFVFNGKLIAFGTPQEMKERE 225 >UniRef50_Q02DK9 Zinc import ATP-binding protein znuC n=178 Tax=Proteobacteria RepID=ZNUC_PSEAB Length = 269 Score = 62.8 bits (151), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 53/162 (32%), Positives = 84/162 (51%), Gaps = 11/162 (6%) Query: 768 GKRYNRETLEIKYKGKTIHEVLDMTIE-EAREFFDAVPALARK--LQTLMDVGLTYIRLG 824 G+ + R L I Y + +H +D T+ F VP + R+ L L +VG ++ L Sbjct: 60 GEVWRRPRLTIGYMPQKLH--VDATLPLSVLRFLRLVPGVKREQALAALREVGAAHV-LE 116 Query: 825 QSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQ-GN 883 + ++SGGE QRV LAR L ++ L +LDEP G+ A +L ++ KLRD+ G Sbjct: 117 RPLQSISGGELQRVLLARALLRK---PELLVLDEPVQGVDVAGQAELYRLIGKLRDRYGC 173 Query: 884 TIVVIEHNLDVIKTA-DWIVDLGPEGGSGGGEILVSGTPETV 924 ++++ H+L ++ +A D +V L G VSG P V Sbjct: 174 GVLMVSHDLHLVMSATDQVVCLNRHVCCSGHPEQVSGDPAFV 215 >UniRef50_Q28MT7 ABC transporter related n=1 Tax=Jannaschia sp. CCS1 RepID=Q28MT7_JANSC Length = 502 Score = 62.8 bits (151), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 57/186 (30%), Positives = 93/186 (50%), Gaps = 17/186 (9%) Query: 468 KFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERL 527 K L VGL+ + ++ E L+ GE Q + +A + +G + +LDEP+ L R+ ERL Sbjct: 124 KMLARVGLDVSSDTK-VERLAPGERQLVEIAKALASG--ARIIILDEPTTSLTNRETERL 180 Query: 528 LGTLIHLRDLGNTVIVVEHD-EDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPES 586 L LR G ++I + H + + AD V+ + G V GG + A VP Sbjct: 181 FAVLRELRSEGCSMIYISHVLQHVLDLADDVVVLRDGTHVGGGPI-------ADFDVPRM 233 Query: 587 LTGQYMSGKRKIE--VPKKRVPANPEKVLKLTGARGNNL-KDVTLTLPVGLFTCITGVSG 643 ++ M R+I+ P++ VPA + VL L G + +DV+L + G I G+ G Sbjct: 234 IS---MMVGREIDQLFPQRTVPAGEDVVLSLEGVSQPGICRDVSLQVHKGEVLGIFGLMG 290 Query: 644 SGKSTL 649 +G++ L Sbjct: 291 AGRTEL 296 Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 35/97 (36%), Positives = 54/97 (55%), Gaps = 4/97 (4%) Query: 830 LSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIE 889 L+ GE Q V++A+ L+ +G + ILDEPTT L + ++L VL +LR +G +++ I Sbjct: 142 LAPGERQLVEIAKALA---SGARIIILDEPTTSLTNRETERLFAVLRELRSEGCSMIYIS 198 Query: 890 HNLD-VIKTADWIVDLGPEGGSGGGEILVSGTPETVA 925 H L V+ AD +V L GGG I P ++ Sbjct: 199 HVLQHVLDLADDVVVLRDGTHVGGGPIADFDVPRMIS 235 >UniRef50_D0L9T7 ABC transporter related protein n=3 Tax=Corynebacterineae RepID=D0L9T7_GORB4 Length = 353 Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 37/104 (35%), Positives = 61/104 (58%), Gaps = 10/104 (9%) Query: 827 ATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIV 886 A +LSGG+ + +++AR L T + +LDEP G++ A Q LL+ + LRD G T+V Sbjct: 192 AGSLSGGQRKLLEMARALM---TDPKIVMLDEPMAGVNPALTQSLLEHIKSLRDDGVTVV 248 Query: 887 VIEHNLDVIK-TADWIVDLGPEGGSGGGEILVSGTPETVAECEA 929 +EH++DVI+ +DW+V + G+++ P + E EA Sbjct: 249 FVEHDMDVIRDISDWVVVMAQ------GQVIAETLPHRLGENEA 286 >UniRef50_B8H6T0 ABC transporter related n=26 Tax=Actinobacteria (class) RepID=B8H6T0_ARTCA Length = 517 Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 51/130 (39%), Positives = 71/130 (54%), Gaps = 9/130 (6%) Query: 808 RKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFAD 867 R + L DVGL+++ L + LSGG+ QR+ LA L+ R L +LDEPT L A Sbjct: 138 RVHEALADVGLSHLPLDHPTSALSGGQKQRLALAGILAMR---PGLILLDEPTANLDPAG 194 Query: 868 IQQLLDVLHKLRDQ-GNTIVVIEHNLDVIK-TADWIVDLGPEGGSGGG-EILVSGTPETV 924 + + D + + D+ G T+VV+EH + V K D IV L P GSG +L+ G P+ V Sbjct: 195 VLDVRDAVARCLDKTGATLVVVEHRVSVWKDLVDRIVVLQP--GSGASPAVLLEGPPDRV 252 Query: 925 -AECEASHTA 933 AE TA Sbjct: 253 LAEARTMLTA 262 Score = 42.7 bits (99), Expect = 0.068, Method: Compositional matrix adjust. Identities = 37/117 (31%), Positives = 59/117 (50%), Gaps = 9/117 (7%) Query: 470 LVNVGLNYLTLSRSAETLSGGEAQRIRLASQIG--AGLVGVMYVLDEPSIGLHQRDNERL 527 L +VGL++L L LSGG+ QR+ LA + GL+ +LDEP+ L + Sbjct: 143 LADVGLSHLPLDHPTSALSGGQKQRLALAGILAMRPGLI----LLDEPTANLDPAGVLDV 198 Query: 528 LGTLIHLRD-LGNTVIVVEHDEDAIR-AADHVIDIGPGAGVHGGEVVAEGPLEAIMA 582 + D G T++VVEH + D ++ + PG+G V+ EGP + ++A Sbjct: 199 RDAVARCLDKTGATLVVVEHRVSVWKDLVDRIVVLQPGSGASPA-VLLEGPPDRVLA 254 >UniRef50_A9BQS1 ABC transporter related n=8 Tax=Proteobacteria RepID=A9BQS1_DELAS Length = 252 Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 40/107 (37%), Positives = 62/107 (57%), Gaps = 7/107 (6%) Query: 805 ALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLH 864 AL R Q L +VGL++ R LSGGE QRV +AR ++K L DEPT+ L Sbjct: 137 ALRRAQQALDEVGLSH-RSHMRPAELSGGEKQRVAIARAMAK---APQLLFADEPTSALD 192 Query: 865 FADIQQLLDVLHK-LRDQGNTIVVIEHNLDVIKTADWIVDLGPEGGS 910 Q+++D+LH+ R+ G T++ + H+ +++ AD + LG E G+ Sbjct: 193 AESGQRVIDILHRAARNHGTTVLCVSHDPRLVRHADRV--LGMEDGA 237 Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust. Identities = 34/96 (35%), Positives = 50/96 (52%), Gaps = 4/96 (4%) Query: 470 LVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLG 529 L VGL++ + R AE LSGGE QR+ +A + + DEP+ L +R++ Sbjct: 145 LDEVGLSHRSHMRPAE-LSGGEKQRVAIARAMAK--APQLLFADEPTSALDAESGQRVID 201 Query: 530 TLIHL-RDLGNTVIVVEHDEDAIRAADHVIDIGPGA 564 L R+ G TV+ V HD +R AD V+ + GA Sbjct: 202 ILHRAARNHGTTVLCVSHDPRLVRHADRVLGMEDGA 237 >UniRef50_D2RY14 ABC transporter related protein n=2 Tax=Halobacteriaceae RepID=D2RY14_9EURY Length = 240 Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 49/153 (32%), Positives = 80/153 (52%), Gaps = 31/153 (20%) Query: 773 RETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSG 832 RE L+I G +V ++IEEA E F+ + A R + ++LSG Sbjct: 99 RENLQIADHGGA-SDVDSLSIEEALEMFENLNA----------------RTENAGSSLSG 141 Query: 833 GEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNL 892 GE Q + +AR L G L +LDEPT GL +Q ++D++ +L D+G T++++E N+ Sbjct: 142 GEQQMLAIARALVG---GADLILLDEPTEGLAPYIVQDVMDIVRELNDRGITVLLVEQNV 198 Query: 893 DV-IKTAD--WIVDLGPEGGSGGGEILVSGTPE 922 V ++ AD ++++ GEI+ GT E Sbjct: 199 HVCLELADRNYVIN--------QGEIVYEGTAE 223 >UniRef50_C6QB88 ABC transporter related protein n=9 Tax=Proteobacteria RepID=C6QB88_9RHIZ Length = 295 Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 55/160 (34%), Positives = 83/160 (51%), Gaps = 24/160 (15%) Query: 785 IHEVLDMTIEEAREFFDAVPA--LARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLAR 842 + + MT+E VPA +A+ L+ DVG Q + LSGGE QRV +AR Sbjct: 118 VDAAIPMTVEGFLALGWPVPAKDIAKALE---DVGARRT-AHQQLSKLSGGETQRVLIAR 173 Query: 843 ELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNT-IVVIEHNLDVIKT-ADW 900 L +R L ILDEP +G+ FA +L +++ KLRD+ + I+++ H+L V+ +D Sbjct: 174 ALLRR---PNLLILDEPASGVDFAGEAELYELVGKLRDERHLGILLVSHDLHVVMAKSDR 230 Query: 901 IVDLGPEGGSGGGEILVSGTPETVAECEASHT--ARFLKP 938 ++ L G + SG PE V++ HT AR P Sbjct: 231 VICL-------NGHVCCSGEPEHVSQ----HTEYARIFGP 259 >UniRef50_UPI0001854C6C excinuclease ABC subunit A n=1 Tax=Helicobacter pylori HPKX_438_CA4C1 RepID=UPI0001854C6C Length = 109 Score = 61.2 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 34/88 (38%), Positives = 48/88 (54%), Gaps = 6/88 (6%) Query: 247 FSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPELSLAGGA 306 +S + AC C S ELEP FSFN+P GAC +C GLG + D +++ +P L GA Sbjct: 15 YSEHKACFKCKMSFEELEPLSFSFNSPKGACESCLGLGTKFSLDISKIL-DPNTPLNQGA 73 Query: 307 IR---GWDRRNFYYFQMLKSLADHYKFD 331 I+ G++R YY QM + + D Sbjct: 74 IKVIFGYNRS--YYAQMFEGFCTYNGID 99 >UniRef50_B4SQQ9 ABC transporter related n=7 Tax=Bacteria RepID=B4SQQ9_STRM5 Length = 242 Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 39/100 (39%), Positives = 59/100 (59%), Gaps = 7/100 (7%) Query: 806 LARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHF 865 LARK L +VGLT+ R LSGGE QRV +AR +K TL DEPT+ L Sbjct: 130 LARK--ALDEVGLTH-RSHMRPAQLSGGEKQRVAVARAFAK---SPTLIFADEPTSALDA 183 Query: 866 ADIQQLLDVLHKL-RDQGNTIVVIEHNLDVIKTADWIVDL 904 + Q+++D+LH+ R G T++ + H+ +I+ AD ++ + Sbjct: 184 ENGQRVIDILHRYARAHGATVLCVSHDPRLIRHADRVIAM 223 Score = 45.4 bits (106), Expect = 0.010, Method: Compositional matrix adjust. Identities = 35/97 (36%), Positives = 49/97 (50%), Gaps = 4/97 (4%) Query: 468 KFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERL 527 K L VGL + + R A+ LSGGE QR+ +A + DEP+ L + +R+ Sbjct: 133 KALDEVGLTHRSHMRPAQ-LSGGEKQRVAVARAFAKS--PTLIFADEPTSALDAENGQRV 189 Query: 528 LGTLI-HLRDLGNTVIVVEHDEDAIRAADHVIDIGPG 563 + L + R G TV+ V HD IR AD VI + G Sbjct: 190 IDILHRYARAHGATVLCVSHDPRLIRHADRVIAMEDG 226 >UniRef50_Q5YXV6 Putative ABC transporter ATP-binding protein n=1 Tax=Nocardia farcinica RepID=Q5YXV6_NOCFA Length = 494 Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 61/176 (34%), Positives = 82/176 (46%), Gaps = 29/176 (16%) Query: 479 TLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLG 538 L R SGGE R+ LA Q+ A V+ V+DEP++GL LL +L LR G Sbjct: 136 VLRRYPFEFSGGERARLALA-QVLAVRPDVL-VIDEPTVGLDPIARAALLRSLATLRAQG 193 Query: 539 NTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKI 598 +++V HD A RA D + VHGG +V E P E + + P GK Sbjct: 194 AAILLVTHDPVAERAGDRTLY------VHGGRIVEELPPEPVASEP--------GGK--- 236 Query: 599 EVPKKRVPANPEKVLKLTGA-----RGNNLKDVTLTLPVGLFTCITGVSGSGKSTL 649 P+ P VL+L G R L ++ L + G I GVSG+GKST+ Sbjct: 237 ---PAAAPSAP--VLRLRGVTVTLHRRRILHEIDLAVRAGELLAILGVSGAGKSTI 287 >UniRef50_Q4L6Q6 MreA protein n=7 Tax=Bacillales RepID=Q4L6Q6_STAHJ Length = 258 Score = 60.8 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 44/167 (26%), Positives = 86/167 (51%), Gaps = 27/167 (16%) Query: 748 VIKVEMHFLP----DIYVPCDQCKGKRYNRETLEIKYKGK-----------TIHEVLDMT 792 ++K+ + LP +IY+ D K+ N+ L+I Y + ++ EV+ Sbjct: 47 LLKIILGLLPLQKGEIYI--DGKSYKKQNQSALKISYVSQKATAFNAGFPASVKEVVLSG 104 Query: 793 IEEAREFFDAVPALARKLQTLMDVGLTYIRLG----QSATTLSGGEAQRVKLARELSKRG 848 + + ++ F +K + L+D LT + + ++ LSGG+ QRV +AR L Sbjct: 105 LTKTKKLFQK---FNKKDEALVDKVLTRLNINHLINKNIAELSGGQQQRVLIARALI--- 158 Query: 849 TGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVI 895 + ++ +LDEPT G+ + + + L KL+D+G TI+++ H++ V+ Sbjct: 159 SNPSVLVLDEPTNGIDAKHVSEFYETLEKLKDEGITIILVTHDIGVV 205 Score = 44.7 bits (104), Expect = 0.019, Method: Composition-based stats. Identities = 27/80 (33%), Positives = 46/80 (57%), Gaps = 3/80 (3%) Query: 468 KFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERL 527 K L + +N+L ++++ LSGG+ QR+ +A + + + VLDEP+ G+ + Sbjct: 125 KVLTRLNINHL-INKNIAELSGGQQQRVLIARALISN--PSVLVLDEPTNGIDAKHVSEF 181 Query: 528 LGTLIHLRDLGNTVIVVEHD 547 TL L+D G T+I+V HD Sbjct: 182 YETLEKLKDEGITIILVTHD 201 >UniRef50_Q5WD41 Multidrug ABC transporter ATP-binding protein n=2 Tax=Firmicutes RepID=Q5WD41_BACSK Length = 257 Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 45/154 (29%), Positives = 74/154 (48%), Gaps = 14/154 (9%) Query: 778 IKYKGKTIHEVLDMTIEEAREFFDAVPALARK-----LQTLMDVGLTYIRLGQSATTLSG 832 I Y + L++T+ E +F+ A+ L +K +QTL+ + R+ Q A LSG Sbjct: 80 IGYMSQKFSLYLELTVLENLQFYGAIYGLKKKELAARIQTLLRLTKLEDRISQRAGALSG 139 Query: 833 GEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNL 892 G QR+ L + L ILDEPT G+ + +++H+L+ T++V H + Sbjct: 140 GWKQRLALCCAMLHE---PELLILDEPTAGVDPVSRKIFWEIIHQLKKDDVTVLVTTHYM 196 Query: 893 DVIKTADWIVDLGPEGGSGGGEILVSGTPETVAE 926 D T D I G G +LV+G P+ + + Sbjct: 197 DEALTCDNI------GFMYAGNLLVNGGPKEIMD 224 >UniRef50_A0JU30 ABC transporter related n=15 Tax=Actinobacteria (class) RepID=A0JU30_ARTS2 Length = 349 Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 35/104 (33%), Positives = 62/104 (59%), Gaps = 10/104 (9%) Query: 827 ATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIV 886 A +LSGG+ + +++AR L R L +LDEP G++ A Q LLD + L+ +G T++ Sbjct: 191 AASLSGGQRKLLEMARSLMVR---PKLVMLDEPMAGVNPALTQSLLDHIKNLKAEGMTVL 247 Query: 887 VIEHNLDVIK-TADWIVDLGPEGGSGGGEILVSGTPETVAECEA 929 +EH++++++ ADW+V + G+I+ G P+ V + A Sbjct: 248 FVEHDMNMVRHIADWVVVMAE------GKIVAEGPPQDVMKNPA 285 Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust. Identities = 35/102 (34%), Positives = 56/102 (54%), Gaps = 9/102 (8%) Query: 484 AETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIV 543 A +LSGG+ + + +A + VM LDEP G++ + LL + +L+ G TV+ Sbjct: 191 AASLSGGQRKLLEMARSLMVRPKLVM--LDEPMAGVNPALTQSLLDHIKNLKAEGMTVLF 248 Query: 544 VEHDEDAIR-AADHVIDIGPGAGVHGGEVVAEGPLEAIMAVP 584 VEHD + +R AD V+ + G++VAEGP + +M P Sbjct: 249 VEHDMNMVRHIADWVVVMAE------GKIVAEGPPQDVMKNP 284 >UniRef50_D1XHZ3 ABC transporter related protein n=1 Tax=Streptomyces sp. ACTE RepID=D1XHZ3_9ACTO Length = 534 Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 62/174 (35%), Positives = 78/174 (44%), Gaps = 12/174 (6%) Query: 479 TLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLG 538 TL R SGG+ QR+ LA + G V VLDEPS GL RL G L L G Sbjct: 146 TLRRFPHQFSGGQRQRVALAQVLVCGPRAV--VLDEPSTGLDTVARLRLAGELARLAAQG 203 Query: 539 NTVIVVEHDEDAIRA-ADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMS--GK 595 V+++ HD D +RA A I + G G A P+ A+P TG S G+ Sbjct: 204 IAVLLLSHDHDLVRAVAARTILLDRGRVTDMGGTAALLPVRPPAALPAPATGPSPSSGGR 263 Query: 596 RKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTL 649 +E P G RG L DVT+ +P T + G SGSGK+ L Sbjct: 264 NALEAHGLSAWLRP-------GRRGEVLHDVTVRVPEAGCTGVVGPSGSGKTVL 310 >UniRef50_B8FQG8 ABC transporter related n=17 Tax=Firmicutes RepID=B8FQG8_DESHD Length = 275 Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 42/113 (37%), Positives = 69/113 (61%), Gaps = 11/113 (9%) Query: 830 LSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKL-RDQGNTIVVI 888 LSGG+ QRV +A L+++ L +LDEPTT L + ++L +L++L R+QG TIV++ Sbjct: 140 LSGGQRQRVWIAMALAQQ---TDLILLDEPTTYLDLSYQLEVLQLLYQLNREQGCTIVMV 196 Query: 889 EHNLDV-IKTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLKPML 940 H+L++ + AD++V + GG+I+ GTPE V E A ++ M+ Sbjct: 197 LHDLNLAARFADYMVAI------RGGKIIRHGTPEEVMTVEVLREAFQIEAMI 243 >UniRef50_D0LDS7 ABC transporter related protein n=6 Tax=Corynebacterineae RepID=D0LDS7_GORB4 Length = 848 Score = 60.1 bits (144), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 36/95 (37%), Positives = 53/95 (55%), Gaps = 8/95 (8%) Query: 830 LSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIE 889 LSGG+ +R +A EL TG +L ILDEPT+GL A +Q++ L +L D G ++V+ Sbjct: 430 LSGGQQKRASVAMELL---TGPSLLILDEPTSGLDPALDRQVMATLRRLADAGRVVLVVT 486 Query: 890 HNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETV 924 H+L + D ++ L P GG+ G P V Sbjct: 487 HSLTYLSMCDQVLLLAP-----GGKTAFCGAPAGV 516 Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust. Identities = 27/79 (34%), Positives = 43/79 (54%), Gaps = 2/79 (2%) Query: 485 ETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVV 544 E LSGG+ +R +A ++ G + +LDEP+ GL + +++ TL L D G V+VV Sbjct: 428 EKLSGGQQKRASVAMELLTG--PSLLILDEPTSGLDPALDRQVMATLRRLADAGRVVLVV 485 Query: 545 EHDEDAIRAADHVIDIGPG 563 H + D V+ + PG Sbjct: 486 THSLTYLSMCDQVLLLAPG 504 >UniRef50_A9KLL1 ABC transporter related n=1 Tax=Clostridium phytofermentans ISDg RepID=A9KLL1_CLOPH Length = 252 Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 40/102 (39%), Positives = 61/102 (59%), Gaps = 5/102 (4%) Query: 808 RKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFAD 867 R ++ +M++ T +G++ TLSGGE QRV LA L++ ILDEPTT L Sbjct: 115 RIIRRVMELTNTLDFVGKNVKTLSGGECQRVYLAMVLAQNSD---YLILDEPTTSLDIKH 171 Query: 868 IQQLLDVLHKLRDQGNTIVVIEHNL-DVIKTADWIVDLGPEG 908 + L++L LR+ G TI+VI H++ + I+ AD ++ L EG Sbjct: 172 RLEFLELLKSLRNLGKTILVILHDISEAIQIADILI-LMKEG 212 Score = 52.4 bits (124), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 31/87 (35%), Positives = 49/87 (56%), Gaps = 3/87 (3%) Query: 482 RSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTV 541 ++ +TLSGGE QR+ LA + +LDEP+ L + L L LR+LG T+ Sbjct: 132 KNVKTLSGGECQRVYLAMVLAQN--SDYLILDEPTTSLDIKHRLEFLELLKSLRNLGKTI 189 Query: 542 IVVEHD-EDAIRAADHVIDIGPGAGVH 567 +V+ HD +AI+ AD +I + G ++ Sbjct: 190 LVILHDISEAIQIADILILMKEGKIIN 216 >UniRef50_C5C220 ABC transporter related n=2 Tax=Actinobacteria (class) RepID=C5C220_BEUC1 Length = 538 Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 66/201 (32%), Positives = 92/201 (45%), Gaps = 31/201 (15%) Query: 470 LVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLG 529 L V L+ TL+ A LSGG QR+ LA + L +LDEP+ GL R+L Sbjct: 137 LAMVSLDERTLTSYAHELSGGMRQRVSLA--LALALRPRFVLLDEPTTGLDVLVQRRILD 194 Query: 530 TLIHLR-DLGNTVIVVEHDEDAI-RAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVP--- 584 L L+ DLG V+ V HD A+ AD ++ + G E+V + ++ P Sbjct: 195 RLRALQADLGFAVLFVTHDIGAVLEMADRMLVMTEG------EIVEDAAAADVLLRPAHP 248 Query: 585 --ESLTGQYMSGKRKIEVPKKRVPA-NPEKVLKL-------TGARGNN------LKDVTL 628 +SL Y + + VP + A PE VL++ RG N L V+L Sbjct: 249 YTQSLLASYAATR--TPVPHRAADAVEPEVVLRVEDVRRRYVTGRGRNRTAVQALDGVSL 306 Query: 629 TLPVGLFTCITGVSGSGKSTL 649 L G T + G SGSGKST+ Sbjct: 307 ELRSGKVTALVGQSGSGKSTI 327 Score = 43.9 bits (102), Expect = 0.028, Method: Compositional matrix adjust. Identities = 35/97 (36%), Positives = 52/97 (53%), Gaps = 5/97 (5%) Query: 808 RKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFAD 867 R ++ L V L L A LSGG QRV LA L+ R +LDEPTTGL Sbjct: 132 RAVEALAMVSLDERTLTSYAHELSGGMRQRVSLALALALR---PRFVLLDEPTTGLDVLV 188 Query: 868 IQQLLDVLHKLR-DQGNTIVVIEHNL-DVIKTADWIV 902 +++LD L L+ D G ++ + H++ V++ AD ++ Sbjct: 189 QRRILDRLRALQADLGFAVLFVTHDIGAVLEMADRML 225 >UniRef50_A9NFI8 ABC-type transport system, ATP-binding component n=10 Tax=Bacteria RepID=A9NFI8_ACHLI Length = 234 Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 39/99 (39%), Positives = 60/99 (60%), Gaps = 6/99 (6%) Query: 822 RLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQ 881 R Q A+TLSGGE Q + + R L G + L +LDEP+ GL ++ + +++ K+RD Sbjct: 128 RRKQQASTLSGGEQQMLSIGRAL--MGEPEVL-LLDEPSLGLAPLIVKDIFEIIIKIRDA 184 Query: 882 GNTIVVIEHN-LDVIKTAD--WIVDLGPEGGSGGGEILV 917 G TI+++E N L +K AD +I++LG G G+ LV Sbjct: 185 GKTILIVEQNALQTLKIADYAYILELGKIVSEGKGQDLV 223 Score = 45.4 bits (106), Expect = 0.012, Method: Compositional matrix adjust. Identities = 36/114 (31%), Positives = 61/114 (53%), Gaps = 14/114 (12%) Query: 482 RSAETLSGGEAQRIRLASQIGAGLVGV--MYVLDEPSIGLHQRDNERLLGTLIHLRDLGN 539 + A TLSGGE Q + IG L+G + +LDEPS+GL + + +I +RD G Sbjct: 131 QQASTLSGGEQQML----SIGRALMGEPEVLLLDEPSLGLAPLIVKDIFEIIIKIRDAGK 186 Query: 540 TVIVVEHDE-DAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYM 592 T+++VE + ++ AD+ + G++V+EG + ++ ESL Y+ Sbjct: 187 TILIVEQNALQTLKIADYAYIL------ELGKIVSEGKGQDLVK-DESLINAYL 233 >UniRef50_Q7WNN2 Probable ATP-binding component of ABC transporter n=1 Tax=Bordetella bronchiseptica RepID=Q7WNN2_BORBR Length = 549 Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 56/195 (28%), Positives = 86/195 (44%), Gaps = 19/195 (9%) Query: 467 LKFLVNVGLN--YLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDN 524 +K L VGL L R LSGG+ QR +A + A + + DEP+ L Sbjct: 129 IKLLDEVGLPDPAAMLGRHPFELSGGQQQRAMIAMTLAAE--PALLIADEPTTALDVTTQ 186 Query: 525 ERLLGTLIHL-RDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAV 583 ++LG L + R ++ + HD DA+R + + + GG +V +GP ++ Sbjct: 187 AQILGLLRGIQRQRRMAMLFISHDLDAVRTMSDRVAV-----MCGGRLVEQGPAREVLLA 241 Query: 584 P-ESLTGQYMSGKRKIEVPKKRVPANPEKVLKLTGA--------RGNNLKDVTLTLPVGL 634 P T M+ + ++ PA+ E ++L G L+ VTL + G Sbjct: 242 PRHDYTRTLMAAHAPQPLKRRHAPASAETAIELDGVCVDYGRWKPKRALEQVTLQVRAGA 301 Query: 635 FTCITGVSGSGKSTL 649 I G SGSGKSTL Sbjct: 302 TLGIAGESGSGKSTL 316 Score = 50.1 bits (118), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 37/95 (38%), Positives = 55/95 (57%), Gaps = 5/95 (5%) Query: 810 LQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQ 869 + L DVGL L + +SGG+ QRV +AR L+ + + I DEP + L + Sbjct: 391 IAMLEDVGLAPDLLARFPHQISGGQRQRVVIARALAMQ---PRVLICDEPVSALDASVRN 447 Query: 870 QLLDVLHKLRDQ-GNTIVVIEHNLDVIKT-ADWIV 902 Q+L +L +LRDQ G T+V I H+L V+ + AD I+ Sbjct: 448 QILALLARLRDQHGLTLVFIGHDLGVMASLADDIL 482 Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust. Identities = 33/94 (35%), Positives = 49/94 (52%), Gaps = 6/94 (6%) Query: 807 ARKLQTLMDVGLT--YIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLH 864 AR ++ L +VGL LG+ LSGG+ QR +A L+ L I DEPTT L Sbjct: 126 ARAIKLLDEVGLPDPAAMLGRHPFELSGGQQQRAMIAMTLAAE---PALLIADEPTTALD 182 Query: 865 FADIQQLLDVLHKL-RDQGNTIVVIEHNLDVIKT 897 Q+L +L + R + ++ I H+LD ++T Sbjct: 183 VTTQAQILGLLRGIQRQRRMAMLFISHDLDAVRT 216 >UniRef50_B1ZTE6 ABC transporter related n=1 Tax=Opitutus terrae PB90-1 RepID=B1ZTE6_OPITP Length = 491 Score = 59.7 bits (143), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 39/114 (34%), Positives = 60/114 (52%), Gaps = 3/114 (2%) Query: 784 TIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARE 843 T+ E + + E AR A R + L +G + I L A +L Q V++AR Sbjct: 96 TVLENIVLGAEPARILLRHAEARQRATEALRQLGRSDIPLDAPAASLGIAAQQFVEIARA 155 Query: 844 LSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKT 897 L+ G + +LDEPT+ L ADI+ L ++ +LRDQG+ IV I H L+ ++ Sbjct: 156 LA---LGCRVLVLDEPTSSLSQADIEHLFRLVRRLRDQGHAIVYISHFLEEVQA 206 >UniRef50_Q89VJ1 ABC transporter ATP-binding protein n=3 Tax=Bradyrhizobium RepID=Q89VJ1_BRAJA Length = 245 Score = 59.7 bits (143), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 43/113 (38%), Positives = 61/113 (53%), Gaps = 22/113 (19%) Query: 793 IEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQT 852 IE A + F PAL RK Q A+TLSGGE +++++AR L Sbjct: 118 IEAALDLF---PALRRKS-------------AQQASTLSGGEQKQLEIARSLLLE---PK 158 Query: 853 LYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADWIVDLG 905 L ++DEP+ GL +QQ D+L LRD+G TI++IE N ++A I D+G Sbjct: 159 LVLIDEPSIGLSPLMVQQTFDILKSLRDRGVTILMIEQN---ARSALEISDIG 208 Score = 42.4 bits (98), Expect = 0.094, Method: Compositional matrix adjust. Identities = 28/81 (34%), Positives = 47/81 (58%), Gaps = 5/81 (6%) Query: 481 SRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNT 540 ++ A TLSGGE +++ +A + L + ++DEPSIGL ++ L LRD G T Sbjct: 133 AQQASTLSGGEQKQLEIARSLL--LEPKLVLIDEPSIGLSPLMVQQTFDILKSLRDRGVT 190 Query: 541 VIVVEHDEDAIRAADHVIDIG 561 ++++E + R+A + DIG Sbjct: 191 ILMIEQNA---RSALEISDIG 208 >UniRef50_A0K1S0 ABC transporter related n=2 Tax=Arthrobacter RepID=A0K1S0_ARTS2 Length = 539 Score = 59.3 bits (142), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 44/116 (37%), Positives = 65/116 (56%), Gaps = 6/116 (5%) Query: 811 QTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQ 870 + L DVGL ++ L + LSGG+ QR+ LA L+ R L +LDEPT L A + + Sbjct: 141 EALEDVGLAHLPLDHPTSALSGGQKQRLALAGILAMR---PGLLLLDEPTANLDPAGVLE 197 Query: 871 LLDVLHKLRDQ-GNTIVVIEHNLDVIKT-ADWIVDLGPEGGSGGGEILVSGTPETV 924 + D + + D+ G T+VV+EH + V K D IV L P G + +L+ G P+ V Sbjct: 198 VRDAVGRCLDKTGATLVVVEHRVGVWKDLVDRIVVLQP-GSATDTAVLLDGPPDQV 252 >UniRef50_A6NWF5 Putative uncharacterized protein n=1 Tax=Bacteroides capillosus ATCC 29799 RepID=A6NWF5_9BACE Length = 458 Score = 59.3 bits (142), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 35/91 (38%), Positives = 53/91 (58%), Gaps = 4/91 (4%) Query: 806 LARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHF 865 L+RK Q + ++ L Y+ LG+S LSGGE Q++ A S + ILDEP++ L + Sbjct: 75 LSRKKQVVQELNLNYL-LGRSLFDLSGGEKQKIACA---SVAALLPDIIILDEPSSNLDW 130 Query: 866 ADIQQLLDVLHKLRDQGNTIVVIEHNLDVIK 896 A I+ L D + + QG TI++ EH L +K Sbjct: 131 AAIRDLRDAMQLWKSQGKTIIISEHRLWYLK 161 Score = 42.7 bits (99), Expect = 0.074, Method: Compositional matrix adjust. Identities = 35/86 (40%), Positives = 45/86 (52%), Gaps = 4/86 (4%) Query: 462 EIGDRLKFLVN-VGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLH 520 EI R K +V + LNYL L RS LSGGE Q+I AS A L+ + +LDEPS L Sbjct: 73 EILSRKKQVVQELNLNYL-LGRSLFDLSGGEKQKIACASV--AALLPDIIILDEPSSNLD 129 Query: 521 QRDNERLLGTLIHLRDLGNTVIVVEH 546 L + + G T+I+ EH Sbjct: 130 WAAIRDLRDAMQLWKSQGKTIIISEH 155 >UniRef50_C5D6I7 ABC transporter related n=1 Tax=Geobacillus sp. WCH70 RepID=C5D6I7_GEOSW Length = 483 Score = 59.3 bits (142), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 58/205 (28%), Positives = 101/205 (49%), Gaps = 24/205 (11%) Query: 461 KEIGDRL-KFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGL 519 +E+ +R+ K L VGL ++ TLSGG QR+ LAS + L + LDEP+ + Sbjct: 107 EEMKERIEKLLETVGL-FVEPHTDIHTLSGGMKQRLALASVLA--LDPDVLFLDEPTAMI 163 Query: 520 HQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHG--GEVVAEGPL 577 + E + T+ + TVI+VEH DH++D + GE++A+ Sbjct: 164 DEEGTEAIWRTVKQIAH-DKTVIIVEH------KIDHILDFVDRIILFNDNGEIIADDKA 216 Query: 578 EAIMAVPESLT---GQYMSGKRKIEVPKK---RVPANPEKVLKLTGARGNNLKDVTL--- 628 + + + + + G + G + K+ RV E++++L +G L+DV + Sbjct: 217 QTVFSDYKDIIASQGIWYPGVWDEYIAKRQRQRVNVRQEEIIRLREFQGYRLRDVKIRVE 276 Query: 629 --TLPVGLFTCITGVSGSGKSTLIN 651 T+ G + ITG +G+GKSTL++ Sbjct: 277 EATVCAGEWIAITGKNGAGKSTLLH 301 Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 27/84 (32%), Positives = 50/84 (59%), Gaps = 6/84 (7%) Query: 825 QSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNT 884 Q LS G+ +R+ +A + +GQ +++LDEPT G + LL++L R+QG T Sbjct: 383 QHPYQLSMGQKRRLSVAASIV---SGQQIFLLDEPTFGQDAKNTFALLELLESYREQGAT 439 Query: 885 IVVIEHNLDVIK---TADWIVDLG 905 I+++ H+ +++K T W+++ G Sbjct: 440 IMMVTHDENIVKYFATRRWVIEDG 463 >UniRef50_Q9KD30 Manganese transport system ATP-binding protein mntB n=4 Tax=Firmicutes RepID=MNTB_BACHD Length = 250 Score = 59.3 bits (142), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 47/128 (36%), Positives = 67/128 (52%), Gaps = 6/128 (4%) Query: 811 QTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQ 870 ++L VG+ R Q LSGG+ QRV +AR L++ L+ LDEP G+ Sbjct: 119 ESLKKVGMEEYRSRQIGE-LSGGQQQRVFIARALAQESE---LFFLDEPFVGIDVTSESI 174 Query: 871 LLDVLHKLRDQGNTIVVIEHNLD-VIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEA 929 +L +L +LRD+G TI V+ H+L V K D ++ L E + G V TPE VA+ Sbjct: 175 ILSLLQELRDRGKTIFVVHHDLSKVEKYFDQVLMLNKELIAYGPVADVY-TPEMVAKTYQ 233 Query: 930 SHTARFLK 937 + A F K Sbjct: 234 GNLATFSK 241 Score = 49.7 bits (117), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 33/102 (32%), Positives = 49/102 (48%), Gaps = 10/102 (9%) Query: 481 SRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNT 540 SR LSGG+ QR+ +A + ++ LDEP +G+ +L L LRD G T Sbjct: 131 SRQIGELSGGQQQRVFIARALAQE--SELFFLDEPFVGIDVTSESIILSLLQELRDRGKT 188 Query: 541 VIVVEHD--------EDAIRAADHVIDIGPGAGVHGGEVVAE 574 + VV HD + + +I GP A V+ E+VA+ Sbjct: 189 IFVVHHDLSKVEKYFDQVLMLNKELIAYGPVADVYTPEMVAK 230 >UniRef50_D1AWW4 ABC transporter related protein n=9 Tax=Fusobacteriaceae RepID=D1AWW4_STRM9 Length = 230 Score = 59.3 bits (142), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 44/144 (30%), Positives = 68/144 (47%), Gaps = 10/144 (6%) Query: 784 TIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARE 843 T+ + L MT + FF K+ L+ Y + + +LSGGE QRV LA+ Sbjct: 88 TVEDFLAMTFQNRAAFFGMNKETRLKVDELLRKIDMYYKKDRMLGSLSGGELQRVLLAQA 147 Query: 844 LSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADWIVD 903 L + L ILDEP +G+ L ++ KL+ +G TI+ I HNL ++D Sbjct: 148 LHPQ---PNLLILDEPFSGIDTVCENYFLGIIQKLKKEGVTIIWIHHNL------KQVID 198 Query: 904 LGPEGGSGGGEILVSGTP-ETVAE 926 + + G ++ SG P E + E Sbjct: 199 IADKVTCIKGTVMFSGVPREEIVE 222 >UniRef50_B1L6P9 ABC-type cobalt transport system, ATPase component n=1 Tax=Candidatus Korarchaeum cryptofilum OPF8 RepID=B1L6P9_KORCO Length = 265 Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 36/96 (37%), Positives = 56/96 (58%), Gaps = 10/96 (10%) Query: 812 TLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQL 871 +L +VGL +R G+S +LSGGE +R+ +A LS R T LDEPT G L Sbjct: 125 SLEEVGLWELR-GRSPWSLSGGEMKRLSIACVLSMR---PTFVALDEPTVGQDAISKDSL 180 Query: 872 LDVLHKLRDQGNTIVVIEHNLDVIKTADWIVDLGPE 907 + +L +LRD+G I+V+ H++ +W+ +L P+ Sbjct: 181 ISLLRRLRDEGKGIIVVTHDI------EWLEELDPD 210 Score = 45.8 bits (107), Expect = 0.009, Method: Compositional matrix adjust. Identities = 34/95 (35%), Positives = 50/95 (52%), Gaps = 4/95 (4%) Query: 462 EIGDRLKF-LVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLH 520 EI D +++ L VGL L RS +LSGGE +R+ +A + + LDEP++G Sbjct: 117 EIRDSVRWSLEEVGLWELR-GRSPWSLSGGEMKRLSIACVLS--MRPTFVALDEPTVGQD 173 Query: 521 QRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAAD 555 + L+ L LRD G +IVV HD + + D Sbjct: 174 AISKDSLISLLRRLRDEGKGIIVVTHDIEWLEELD 208 >UniRef50_Q0BAD9 ABC transporter related n=3 Tax=Burkholderia RepID=Q0BAD9_BURCM Length = 527 Score = 58.9 bits (141), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 32/81 (39%), Positives = 51/81 (62%), Gaps = 3/81 (3%) Query: 813 LMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLL 872 L VGL++I+L A+ LS E Q V++AR +S++ + +LDEPT L A+I ++ Sbjct: 135 LDSVGLSHIKLEAPASRLSLAECQLVEIARGMSRQAK---VLLLDEPTATLSDAEIVRVF 191 Query: 873 DVLHKLRDQGNTIVVIEHNLD 893 +V +LRDQG ++ + H LD Sbjct: 192 EVARRLRDQGTAMIFVSHRLD 212 >UniRef50_C1A5G1 Putative ABC transporter ATP-binding protein n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A5G1_GEMAT Length = 532 Score = 58.9 bits (141), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 35/73 (47%), Positives = 46/73 (63%), Gaps = 4/73 (5%) Query: 830 LSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIE 889 LS GEAQRV++ + L + G + ILDEPT L ++Q+L VL LRD G T+V+I Sbjct: 154 LSVGEAQRVEILKTLYR---GAKILILDEPTAVLSPPEVQELWTVLRALRDDGGTVVLIT 210 Query: 890 HNLD-VIKTADWI 901 H LD VI +D I Sbjct: 211 HKLDEVIAVSDHI 223 Score = 45.1 bits (105), Expect = 0.014, Method: Compositional matrix adjust. Identities = 93/420 (22%), Positives = 153/420 (36%), Gaps = 77/420 (18%) Query: 487 LSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEH 546 LS GEAQR+ + + G + +LDEP+ L + + L L LRD G TV+++ H Sbjct: 154 LSVGEAQRVEILKTLYRG--AKILILDEPTAVLSPPEVQELWTVLRALRDDGGTVVLITH 211 Query: 547 DED-AIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEVPKKRV 605 D I +DH+ + G V P E A+ ++ ++ P Sbjct: 212 KLDEVIAVSDHITVMRAGTTVSRFPTQGVTPREIARAMVGRDVALHLEAVGAVDTPVDSA 271 Query: 606 PANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGA 665 A+ L+ T + VS G + +ND F I Sbjct: 272 TADTSANASAAPTAAPALR----------ITGLQVVSDRGLAA-VNDLSFDI-------- 312 Query: 666 TIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESRARG 725 P I G+E + T + E AG+ R+ Sbjct: 313 ---RPGEIFGIAGVEGNGQ------------------------TELLEAIAGLRTVRSGR 345 Query: 726 YTPGRFSFNVRGGRCEACQGDGVIKVEMH---FLPDIYVPCDQCKGKRYNRETLEIKYKG 782 G +F R A +G I + H + D + + G++++ T +G Sbjct: 346 IELGGQAFGTLSVRERADRGLSHIPEDRHRRGLVLDYSIADNLILGRQHHFGT-----RG 400 Query: 783 KTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLAR 842 K H +D +E FD P + A LSGG Q++ +AR Sbjct: 401 KLDHAAIDANAKEQIGRFDIRPPMP----------------ALPARALSGGNQQKIVIAR 444 Query: 843 ELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNL-DVIKTADWI 901 E+ G ++ + +PT G+ I+ + L RD G I++I +L +V+ +D I Sbjct: 445 EM---GRSFSVLLAAQPTRGVDVGAIEFIHAQLRAARDAGKGILLISADLTEVLALSDRI 501 >UniRef50_C7QHV5 FHA modulated ABC efflux pump with fused ATPase and integral membrane subunits n=1 Tax=Catenulispora acidiphila DSM 44928 RepID=C7QHV5_CATAD Length = 910 Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 41/118 (34%), Positives = 63/118 (53%), Gaps = 8/118 (6%) Query: 807 ARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFA 866 AR + + ++GLT R + LSGG+ +R +A EL R +L ILDEPT+GL Sbjct: 452 ARVDEVMAELGLTE-RGDLAVEKLSGGQRKRTSVAIELLTR---PSLLILDEPTSGLDPG 507 Query: 867 DIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETV 924 + ++D+L KL D G T++ + H++ + D I+ L P GG PET+ Sbjct: 508 YEKSVMDLLRKLADGGRTVITVTHSIQSLDRCDRILFLAP----GGQTAFFGPPPETL 561 >UniRef50_Q89GD6 ABC transporter ATP-binding protein n=1 Tax=Bradyrhizobium japonicum RepID=Q89GD6_BRAJA Length = 231 Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 36/114 (31%), Positives = 61/114 (53%), Gaps = 17/114 (14%) Query: 790 DMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGT 849 D ++E +F A P L+ R GQ A TLSGGE + + R LS+ Sbjct: 107 DRRLDEFEPYFRAFPRLSE-------------RRGQHAGTLSGGEKKLLSFVRGLSE--- 150 Query: 850 GQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVI-KTADWIV 902 G + I+DEPT G+ F ++ ++ +++ ++ G + +V+E NL ++ + AD IV Sbjct: 151 GSAMAIIDEPTEGVQFENVVRMAELMLAQKEAGASFLVVEQNLTLVDRVADRIV 204 >UniRef50_B1VA43 ABC-type Zn/Mn transport system, ATPase component n=11 Tax=Bacteria RepID=B1VA43_PHYAS Length = 254 Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 36/123 (29%), Positives = 70/123 (56%), Gaps = 6/123 (4%) Query: 810 LQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQ 869 +Q L V + ++ + + LSGG+ QR+ LAR L+++ +Y++DEP G+ + Sbjct: 124 MQALEKVAMQDLK-DRQISELSGGQQQRIFLARTLAQQAD---IYLMDEPFQGIDIQTEK 179 Query: 870 QLLDVLHKLRDQGNTIVVIEHNLDVIKTA-DWIVDLGPEGGSGGGEILVSGTPETVAECE 928 +++ VL +L+ Q TI+V+ H+L+ + + D +V L + G + + TPE +A+ Sbjct: 180 RIIAVLKELQSQNKTIIVVHHDLETVSSYFDHVVFLNIK-KIASGPLKTTFTPENIAKTY 238 Query: 929 ASH 931 S+ Sbjct: 239 QSY 241 Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 35/113 (30%), Positives = 56/113 (49%), Gaps = 11/113 (9%) Query: 482 RSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTV 541 R LSGG+ QRI LA + +Y++DEP G+ + +R++ L L+ T+ Sbjct: 138 RQISELSGGQQQRIFLARTLAQQ--ADIYLMDEPFQGIDIQTEKRIIAVLKELQSQNKTI 195 Query: 542 IVVEHDEDAIRAA-DHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMS 593 IVV HD + + + DHV+ + +A GPL+ PE++ Y S Sbjct: 196 IVVHHDLETVSSYFDHVVFLNIKK-------IASGPLKTTFT-PENIAKTYQS 240 >UniRef50_Q56953 Chelated iron transport system membrane protein yfeB n=184 Tax=Bacteria RepID=YFEB_YERPE Length = 296 Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 35/77 (45%), Positives = 50/77 (64%), Gaps = 4/77 (5%) Query: 816 VGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVL 875 VGLT +R Q LSGG+ +RV LAR L+++GT L +LDEP TG+ ++++L Sbjct: 134 VGLTALRSRQIGE-LSGGQKKRVFLARALAQQGT---LLLLDEPFTGVDVKTENAIIELL 189 Query: 876 HKLRDQGNTIVVIEHNL 892 LRD+G+ I+V HNL Sbjct: 190 QSLRDEGHLILVSTHNL 206 Score = 45.1 bits (105), Expect = 0.013, Method: Compositional matrix adjust. Identities = 36/108 (33%), Positives = 54/108 (50%), Gaps = 11/108 (10%) Query: 473 VGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLI 532 VGL L SR LSGG+ +R+ LA + G + +LDEP G+ + ++ L Sbjct: 134 VGLTALR-SRQIGELSGGQKKRVFLARALAQQ--GTLLLLDEPFTGVDVKTENAIIELLQ 190 Query: 533 HLRDLGNTVIVVEHDEDAI-RAADHVIDIGPGAGVHGGEVVAEGPLEA 579 LRD G+ ++V H+ ++ DHVI I V+A GP+E Sbjct: 191 SLRDEGHLILVSTHNLGSVPEFCDHVILINQ-------TVLAAGPIET 231 >UniRef50_A0QSY1 ABC transporter, ATP-binding protein n=61 Tax=Mycobacterium RepID=A0QSY1_MYCS2 Length = 899 Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 32/79 (40%), Positives = 49/79 (62%), Gaps = 3/79 (3%) Query: 830 LSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIE 889 LSGG+ +R +A EL TG +L ILDEPT+GL A +Q++ +L +L D G ++V+ Sbjct: 484 LSGGQRKRASVALELL---TGPSLLILDEPTSGLDPALDRQVMTMLRQLADAGRVVLVVT 540 Query: 890 HNLDVIKTADWIVDLGPEG 908 H+L + D ++ L P G Sbjct: 541 HSLTYLDVCDQVLLLAPGG 559 Score = 42.4 bits (98), Expect = 0.083, Method: Compositional matrix adjust. Identities = 31/103 (30%), Positives = 54/103 (52%), Gaps = 7/103 (6%) Query: 465 DRLKFLVNVGLNYLTLSRSAET----LSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLH 520 DR + ++ V L L +++ +T LSGG+ +R +A ++ G + +LDEP+ GL Sbjct: 459 DREQVVMQV-LEELEMTKHLDTRVDKLSGGQRKRASVALELLTG--PSLLILDEPTSGLD 515 Query: 521 QRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPG 563 + +++ L L D G V+VV H + D V+ + PG Sbjct: 516 PALDRQVMTMLRQLADAGRVVLVVTHSLTYLDVCDQVLLLAPG 558 >UniRef50_O26254 Methyl coenzyme M reductase system, component A2 homolog n=8 Tax=Euryarchaeota RepID=O26254_METTH Length = 590 Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 121/500 (24%), Positives = 208/500 (41%), Gaps = 94/500 (18%) Query: 465 DRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDN 524 D ++ L VGL + A LSGGE QR+ +A Q+ + +LDEP+ R Sbjct: 154 DAMELLRVVGLEH-KADHFAPVLSGGEKQRLIMARQLAKK--PRVLLLDEPATMSCPRTK 210 Query: 525 ERLLGTLIHL-RDLGNTVIVVEH-DEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMA 582 + +L + ++ R+LG TV++V H E AD V+ + GG +V EG Sbjct: 211 QEILDAIKNINRELGVTVVLVSHLPEVHEYLADRVVLM------DGGRIVDEGE------ 258 Query: 583 VPESLTGQYMSGKRKIEVPKKRVP-ANPEKVLK----------LTGARGNNLKDVTLTLP 631 P S+ G+++ IE P + P A +++L+ L G + DV L + Sbjct: 259 -PSSIIGRFLE---DIEPPVEYTPGARGKEILRVRGLGKRFVLLKGGAVLEMSDVNLDIA 314 Query: 632 VGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAEPAPYRDIQGLEHF---DKVIDI 688 G I G SG+GK+ L+ R + G + + +G F + +++ Sbjct: 315 EGEMVSIIGPSGAGKTVLL---------RMIGGLDLPD-------EGTVEFRLNSEWVNM 358 Query: 689 DQSPIGRTPRSNPATYTGVFTPVRELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGV 748 + + R + + + FA V + R R EA + Sbjct: 359 HEPGVKRMGIRRKMGF------MHQEFALVHHATIRSQIASRLGVKGEHVVAEAKKRADE 412 Query: 749 IKVEMHFLPDIYVPCDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAVP---- 804 + + L +Y D + E +Y+ E L ++ E E F + P Sbjct: 413 LGISDMVLDVLYQLTDLPE--------TEARYR----LEKLGLSPEILEELFPSFPDSEV 460 Query: 805 -ALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGL 863 A + +D+ L+ L + + LSGGE R LA L+ R + ILDEP L Sbjct: 461 KRYAEPIFRALDLPLSI--LDRRSYELSGGERVRATLALVLASR---PDVLILDEPFGDL 515 Query: 864 HFADIQQLLDVLHKLRDQ-GNTIVVIEHNLDVIK---TADWIVDLGPEGGSGGGEILVSG 919 ++ + + L ++ + G TI+++ H++D I+ T +V+ G I++ G Sbjct: 516 DPITLRMVSNSLKRINMEFGTTIIMVSHHVDFIRELSTRAVMVE--------DGRIVMDG 567 Query: 920 TPETVAE--CEASHTARFLK 937 P + + E SH AR+L+ Sbjct: 568 EPGELCDEFVERSH-ARYLQ 586 >UniRef50_C7NPH8 ABC transporter related n=1 Tax=Halorhabdus utahensis DSM 12940 RepID=C7NPH8_HALUD Length = 311 Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 46/137 (33%), Positives = 67/137 (48%), Gaps = 16/137 (11%) Query: 784 TIHEVLDMTIEEAREFFDAVPA--------LARKLQTLMDVGLTYIRLGQSA----TTLS 831 TI + + +E R VPA L+R ++D L + + A T LS Sbjct: 146 TIGALREAPLETVRAGLGTVPAIVNAIFGRLSRSDLAIVDEALETVGMSAFADRRITQLS 205 Query: 832 GGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHN 891 GG+ QR +AR L+ L +LDEPT G+ + D+L L D+G T+V+IEH+ Sbjct: 206 GGQRQRAFIARALASEAD---LLVLDEPTVGVDAESVDAFYDLLGALNDEGITVVLIEHD 262 Query: 892 LD-VIKTADWIVDLGPE 907 L V+ AD +V L E Sbjct: 263 LGAVVDHADRVVCLNRE 279 >UniRef50_Q88RL1 Zinc import ATP-binding protein znuC n=51 Tax=Gammaproteobacteria RepID=ZNUC_PSEPK Length = 257 Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 51/163 (31%), Positives = 80/163 (49%), Gaps = 11/163 (6%) Query: 767 KGKRYNRETLEIKYKGKTIHEVLDMTIE-EAREFFDAVPALARK--LQTLMDVGLTYIRL 823 +GK + + L I Y + I +D T+ F VP + R L L +VG + + Sbjct: 59 RGKVWRKPKLRIGYMPQKIQ--VDATLPLSVLRFLRLVPGVDRAAALSALQEVGAEQV-I 115 Query: 824 GQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQ-G 882 T+SGGE QRV LAR L + L +LDEP G+ +L +++ +LRD+ G Sbjct: 116 DSPIQTISGGEMQRVLLARALLRE---PQLLVLDEPVQGVDVVGQTELYNLITRLRDRHG 172 Query: 883 NTIVVIEHNLDVIKTA-DWIVDLGPEGGSGGGEILVSGTPETV 924 ++++ H+L ++ +A D +V L G VSG P V Sbjct: 173 CGVLMVSHDLHLVMSATDQVVCLNRHVCCSGHPEQVSGDPAFV 215 >UniRef50_C3PKN6 Putative ABC transport system, ATP-binding protein n=3 Tax=Actinobacteridae RepID=C3PKN6_CORA7 Length = 478 Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 58/199 (29%), Positives = 94/199 (47%), Gaps = 25/199 (12%) Query: 461 KEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQI--GAGLVGVMYVLDEPSIG 518 EI R+ +++ + LS E LSGG+ QR+ LA I GAG+V +LDEP+ Sbjct: 125 SEIWQRVSAALSMVGPSVDLSFPTEQLSGGQKQRLALAGVIAMGAGMV----LLDEPTAN 180 Query: 519 LHQRDNERLLGTLIHLRD-LGNTVIVVEHDEDAIRAA-DHVIDIGPGAGVHGGEVVAEGP 576 L ++ + + + G T+IVVEH A + D I++ G +VA+GP Sbjct: 181 LDPEGAREVIEAVTTMVERTGATLIVVEHQHAAWKGVLDRAIEL------KDGRIVADGP 234 Query: 577 LEAIMAVPESLTGQYMSGKRKIEVPKKRVPANPEKVLKLTGARGNNL-----KDVTLTLP 631 L+ ++A + +SG + P+N V + +L + LP Sbjct: 235 LDTVVA------SRSISGLPRAREIGGTSPSNTGAVPETAALWSTDLVTRFGPPRSYALP 288 Query: 632 VGLFTCITGVSGSGKSTLI 650 G+ T ITG +G+GK+T + Sbjct: 289 RGMSTVITGPNGAGKTTWL 307 >UniRef50_B5J4J2 ABC transporter, ATP-binding protein, putative n=1 Tax=Octadecabacter antarcticus 307 RepID=B5J4J2_9RHOB Length = 253 Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 30/73 (41%), Positives = 47/73 (64%), Gaps = 4/73 (5%) Query: 830 LSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIE 889 LSGG+ Q + +AR + G ++ +LDEPT L A +Q+LDV+ +LRD G+ ++ I Sbjct: 146 LSGGQRQAIAIARAV---GADCSVVMLDEPTAALGVAQTRQVLDVVKRLRDTGHAVIYIS 202 Query: 890 HNL-DVIKTADWI 901 HN+ D+ + AD I Sbjct: 203 HNMRDIFEVADRI 215 Score = 42.7 bits (99), Expect = 0.068, Method: Compositional matrix adjust. Identities = 33/102 (32%), Positives = 48/102 (47%), Gaps = 3/102 (2%) Query: 487 LSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEH 546 LSGG+ Q I +A +GA VM LDEP+ L ++L + LRD G+ VI + H Sbjct: 146 LSGGQRQAIAIARAVGADCSVVM--LDEPTAALGVAQTRQVLDVVKRLRDTGHAVIYISH 203 Query: 547 D-EDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESL 587 + D AD + + G V P E ++A+ L Sbjct: 204 NMRDIFEVADRICVLRHGGNVATWRTEDTTPDEIVVAMTRGL 245 >UniRef50_A8L5Z0 FHA modulated ABC efflux pump with fused ATPase and integral membrane subunits n=5 Tax=Frankia RepID=A8L5Z0_FRASN Length = 838 Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 41/119 (34%), Positives = 61/119 (51%), Gaps = 13/119 (10%) Query: 790 DMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGT 849 D T E R+ D V L ++GLT + LSGG+ +R +A EL R Sbjct: 382 DTTKAERRQRVDEV---------LAELGLT-AHANTQVSRLSGGQRKRTSVALELLTR-- 429 Query: 850 GQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADWIVDLGPEG 908 TL LDEPT+GL + +++ L KL D G T+VV+ H++ + D+++ L P G Sbjct: 430 -PTLLYLDEPTSGLDPGMDKNVMESLRKLADDGRTVVVVTHSVAQLDLCDYVLVLAPGG 487 >UniRef50_Q79ZU1 MWP018 protein n=32 Tax=Staphylococcus aureus RepID=Q79ZU1_STAAW Length = 208 Score = 58.2 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 40/124 (32%), Positives = 71/124 (57%), Gaps = 7/124 (5%) Query: 781 KGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKL 840 + +TI + LD+ ++ + D + K + L VGL + + + ++LSGGE QRV L Sbjct: 87 ENQTISQNLDLALKFKKNKKDN---MNLKKEVLKKVGLD-LDIKRIVSSLSGGEQQRVAL 142 Query: 841 ARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADW 900 AR + K + + DEPT L + + ++D+L KL D+ T++V+ H+L++ K D Sbjct: 143 ARLILK---DPKIILADEPTGSLDTKNGKIVIDLLLKLLDENKTMIVVTHDLELAKRFDV 199 Query: 901 IVDL 904 IV++ Sbjct: 200 IVNI 203 Score = 47.4 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 45/150 (30%), Positives = 73/150 (48%), Gaps = 14/150 (9%) Query: 421 VYVENTPLPAISDM---SIGHAMEFFNNL--KLAGQRAKIAEKILKEIGDRLKF----LV 471 +Y+E+ L D ++G+ + F L + Q +A K K D + L Sbjct: 58 IYIEDKLLKKKVDFYRYTLGYLFQNFALLENQTISQNLDLALKFKKNKKDNMNLKKEVLK 117 Query: 472 NVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVL-DEPSIGLHQRDNERLLGT 530 VGL+ L + R +LSGGE QR+ LA I L +L DEP+ L ++ + ++ Sbjct: 118 KVGLD-LDIKRIVSSLSGGEQQRVALARLI---LKDPKIILADEPTGSLDTKNGKIVIDL 173 Query: 531 LIHLRDLGNTVIVVEHDEDAIRAADHVIDI 560 L+ L D T+IVV HD + + D +++I Sbjct: 174 LLKLLDENKTMIVVTHDLELAKRFDVIVNI 203 >UniRef50_A8L9L7 ABC transporter related n=3 Tax=Actinomycetales RepID=A8L9L7_FRASN Length = 268 Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 36/92 (39%), Positives = 50/92 (54%), Gaps = 9/92 (9%) Query: 830 LSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIE 889 LSGGE QRV +AR L+ TG + + DEPT L F Q+L +L G T+VV+ Sbjct: 174 LSGGEQQRVAIARALA---TGNPILLADEPTGELDFHTGVQILVLLEAQTAAGRTVVVVT 230 Query: 890 HNLDVIKTADWIVDLGPEGGSGGGEILVSGTP 921 HN ++ + AD +V+L G I+ G P Sbjct: 231 HNREIARIADRVVEL------SSGRIVADGPP 256 >UniRef50_D2NPP9 ABC-type hemin transport system, ATPase component n=5 Tax=Actinomycetales RepID=D2NPP9_9MICC Length = 256 Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 39/102 (38%), Positives = 55/102 (53%), Gaps = 10/102 (9%) Query: 828 TTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVV 887 TTLSGGE+ R LAR +++ L +LDEPT L +Q L V +L +G ++ Sbjct: 137 TTLSGGESGRAHLARVFAQQ---TPLILLDEPTAALDITHQEQTLRVSRELAAEGAAVLT 193 Query: 888 IEHNLDVIKT-ADWIVDLGPEGGSGGGEILVSGTPETVAECE 928 + H+LDV +D +V L GGE++ SG PE V E Sbjct: 194 VLHDLDVAAAYSDRMVLL------RGGEVVASGAPEQVCSAE 229 >UniRef50_D2Q323 ABC transporter related protein n=1 Tax=Kribbella flavida DSM 17836 RepID=D2Q323_9ACTO Length = 325 Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 39/112 (34%), Positives = 65/112 (58%), Gaps = 14/112 (12%) Query: 818 LTYIRLGQSATTLSG----GEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLD 873 L ++ LG+SA L+ G+ +R+++AR L+ T L +LDEPT G++ + +Q D Sbjct: 184 LEFVGLGKSAENLARNMPYGDQRRLEIARALA---TDPKLILLDEPTAGMNPQETKQASD 240 Query: 874 VLHKLRDQGNTIVVIEHNLDVI-KTADWIVDLGPEGGSGGGEILVSGTPETV 924 ++ K+RD G ++VVIEH++ I D ++ L GE L+ G+P V Sbjct: 241 LIFKIRDSGLSVVVIEHDMRFIFNLCDRVLCL------VRGEALIEGSPGEV 286 >UniRef50_C7PWJ0 ABC transporter related n=1 Tax=Catenulispora acidiphila DSM 44928 RepID=C7PWJ0_CATAD Length = 702 Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 36/100 (36%), Positives = 58/100 (58%), Gaps = 7/100 (7%) Query: 814 MDVGLTYIRL----GQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQ 869 +D LT +RL G TLSGG+ +RV +A EL T T+ LDEPT+GL + Sbjct: 212 IDEVLTDLRLTEFEGNKVATLSGGQRKRVSVALELL---TKPTVLFLDEPTSGLDPGMDR 268 Query: 870 QLLDVLHKLRDQGNTIVVIEHNLDVIKTADWIVDLGPEGG 909 ++ +L L D+G T++V+ H++ ++ D ++ + P GG Sbjct: 269 DVMRMLRCLTDEGRTVLVVTHSVAELQACDLLLVMAPGGG 308 Score = 44.7 bits (104), Expect = 0.019, Method: Compositional matrix adjust. Identities = 28/81 (34%), Positives = 45/81 (55%), Gaps = 2/81 (2%) Query: 486 TLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVE 545 TLSGG+ +R+ +A ++ + LDEP+ GL + ++ L L D G TV+VV Sbjct: 231 TLSGGQRKRVSVALELLTK--PTVLFLDEPTSGLDPGMDRDVMRMLRCLTDEGRTVLVVT 288 Query: 546 HDEDAIRAADHVIDIGPGAGV 566 H ++A D ++ + PG GV Sbjct: 289 HSVAELQACDLLLVMAPGGGV 309 >UniRef50_Q73JF3 ABC transporter, ATP-binding protein n=2 Tax=Bacteria RepID=Q73JF3_TREDE Length = 470 Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 28/70 (40%), Positives = 48/70 (68%), Gaps = 3/70 (4%) Query: 829 TLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVI 888 +LSGG+ QR+ +A L+ +G+ L +LDEPT+GL +A +++ +L KLR G TI+V+ Sbjct: 397 SLSGGQKQRLAIACALA---SGRELLLLDEPTSGLDYAHMKETAALLEKLRSMGTTILVV 453 Query: 889 EHNLDVIKTA 898 H+ ++I+ Sbjct: 454 THDSELIRAC 463 Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 27/73 (36%), Positives = 42/73 (57%), Gaps = 2/73 (2%) Query: 482 RSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTV 541 R ++LSGG+ QR+ +A + +G + +LDEP+ GL + L LR +G T+ Sbjct: 393 RHPQSLSGGQKQRLAIACALASG--RELLLLDEPTSGLDYAHMKETAALLEKLRSMGTTI 450 Query: 542 IVVEHDEDAIRAA 554 +VV HD + IRA Sbjct: 451 LVVTHDSELIRAC 463 >UniRef50_A8AVH3 ATP binding protein of ABC transporter n=2 Tax=Streptococcus RepID=A8AVH3_STRGC Length = 475 Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 30/77 (38%), Positives = 53/77 (68%), Gaps = 4/77 (5%) Query: 829 TLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVI 888 TLSGGE QR+ +A S+ T + ++I DEP++GL + + Q+ ++L L++QG I++I Sbjct: 401 TLSGGEMQRLVIA---SQVFTKKRVFIFDEPSSGLDYQQMLQVAELLKALKEQGKIILLI 457 Query: 889 EHNLDVI-KTADWIVDL 904 H+ +++ KTAD+ + L Sbjct: 458 SHDEELLEKTADYFLTL 474 Score = 52.8 bits (125), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 29/74 (39%), Positives = 44/74 (59%), Gaps = 3/74 (4%) Query: 823 LGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQG 882 L + +TLSGGE QR+ L L + +++LDEPT L + I+Q+ L L+ +G Sbjct: 147 LERDLSTLSGGEKQRIALLTALMQ---DTDIFVLDEPTANLDRSGIEQVASYLSILKQEG 203 Query: 883 NTIVVIEHNLDVIK 896 TI++ EH LD +K Sbjct: 204 KTILIAEHRLDYLK 217 Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 34/102 (33%), Positives = 58/102 (56%), Gaps = 4/102 (3%) Query: 460 LKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGL 519 LK++ D L N+GL L R TLSGGE QR+ +ASQ+ +++ DEPS GL Sbjct: 376 LKKVVDASNILENLGLKGLE-ERHPMTLSGGEMQRLVIASQVFTK--KRVFIFDEPSSGL 432 Query: 520 HQRDNERLLGTLIHLRDLGNTVIVVEHDEDAI-RAADHVIDI 560 + ++ L L++ G ++++ HDE+ + + AD+ + + Sbjct: 433 DYQQMLQVAELLKALKEQGKIILLISHDEELLEKTADYFLTL 474 Score = 42.4 bits (98), Expect = 0.082, Method: Compositional matrix adjust. Identities = 26/73 (35%), Positives = 40/73 (54%), Gaps = 2/73 (2%) Query: 480 LSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGN 539 L R TLSGGE QRI L + + ++VLDEP+ L + E++ L L+ G Sbjct: 147 LERDLSTLSGGEKQRIALLTALMQD--TDIFVLDEPTANLDRSGIEQVASYLSILKQEGK 204 Query: 540 TVIVVEHDEDAIR 552 T+++ EH D ++ Sbjct: 205 TILIAEHRLDYLK 217 >UniRef50_B8DI09 Macrolide export ATP-binding/permease protein MacB n=166 Tax=cellular organisms RepID=B8DI09_LISMH Length = 242 Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 42/119 (35%), Positives = 64/119 (53%), Gaps = 6/119 (5%) Query: 788 VLDMTIEEAREFFDAVPALARKLQT-LMDVGLTYIRLGQSATTLSGGEAQRVKLARELSK 846 V ++T +E E + A +T L VGL++ RL LSGGE QRV +AR L+K Sbjct: 106 VPNLTAKENVELAAQIAPNALDAETVLTQVGLSH-RLDNFPAQLSGGEQQRVAIARALAK 164 Query: 847 RGTGQTLYILDEPTTGLHFADIQQLLDVLHK-LRDQGNTIVVIEHNLDVIKTADWIVDL 904 L + DEPT L + + +L +L + R+ G T++VI HN + AD I+++ Sbjct: 165 ---APKLLLCDEPTGALDYDTGKSVLKLLQETCRNTGTTVIVITHNTAITPIADRIIEI 220 Score = 45.1 bits (105), Expect = 0.012, Method: Compositional matrix adjust. Identities = 39/129 (30%), Positives = 61/129 (47%), Gaps = 8/129 (6%) Query: 436 IGHAMEFFN---NLKLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEA 492 +G +F+N NL A + ++A +I D L VGL++ L LSGGE Sbjct: 96 VGFVFQFYNLVPNLT-AKENVELAAQIAPNALDAETVLTQVGLSH-RLDNFPAQLSGGEQ 153 Query: 493 QRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIH-LRDLGNTVIVVEHDEDAI 551 QR+ +A + + + DEP+ L + +L L R+ G TVIV+ H+ Sbjct: 154 QRVAIARALAKA--PKLLLCDEPTGALDYDTGKSVLKLLQETCRNTGTTVIVITHNTAIT 211 Query: 552 RAADHVIDI 560 AD +I+I Sbjct: 212 PIADRIIEI 220 >UniRef50_Q08JN4 AatC, ATP binding protein of ABC transporter n=6 Tax=Enterobacteriaceae RepID=Q08JN4_ECOLX Length = 209 Score = 57.8 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 32/93 (34%), Positives = 56/93 (60%), Gaps = 5/93 (5%) Query: 803 VPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTG 862 + A R L+ VGL+ I + + LSGGE QR+ LAR L K+ ++ + DEPT Sbjct: 110 IAARERINDILLSVGLSNIN--NNVSFLSGGEKQRLALARALIKK---PSILLADEPTAS 164 Query: 863 LHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVI 895 L + + ++++L + +QG T+V++ H+L++I Sbjct: 165 LDIKNKKLVMNILSEYNNQGGTVVMVTHDLELI 197 >UniRef50_C4G5D3 Putative uncharacterized protein n=1 Tax=Abiotrophia defectiva ATCC 49176 RepID=C4G5D3_ABIDE Length = 476 Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 31/83 (37%), Positives = 53/83 (63%), Gaps = 4/83 (4%) Query: 823 LGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQG 882 LG++ LSGGE Q + LA S +Y+LDEP++ L A +++L ++LH ++ QG Sbjct: 134 LGRNIFKLSGGEKQIIALA---SAYAAEPEIYVLDEPSSNLDNASVERLKELLHYIKAQG 190 Query: 883 NTIVVIEHNLDVIKTA-DWIVDL 904 T+++ EH L+ +++A D +V L Sbjct: 191 KTVIIAEHRLNYLRSAMDRVVYL 213 Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 26/86 (30%), Positives = 49/86 (56%), Gaps = 4/86 (4%) Query: 829 TLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVI 888 LSGG+ QR+ + + + +G+ + I DEPT+GL + + Q +++ KL +G ++VI Sbjct: 379 VLSGGQRQRLAVCQTVL---SGKKVVIFDEPTSGLDYTHMMQTGEIIQKLSHEGYIVLVI 435 Query: 889 EHNLDVIK-TADWIVDLGPEGGSGGG 913 H+ + + ++ LG +G GG Sbjct: 436 THDYEFLNLVCHSVIQLGGQGAVKGG 461 Score = 49.3 bits (116), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 36/85 (42%), Positives = 47/85 (55%), Gaps = 3/85 (3%) Query: 480 LSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGN 539 L R+ LSGGE Q I LAS A +YVLDEPS L ERL L +++ G Sbjct: 134 LGRNIFKLSGGEKQIIALASAYAAE--PEIYVLDEPSSNLDNASVERLKELLHYIKAQGK 191 Query: 540 TVIVVEHDEDAIRAA-DHVIDIGPG 563 TVI+ EH + +R+A D V+ + G Sbjct: 192 TVIIAEHRLNYLRSAMDRVVYLKDG 216 >UniRef50_A8L1Y4 FHA modulated ABC efflux pump with fused ATPase and integral membrane subunits n=13 Tax=Bacteria RepID=A8L1Y4_FRASN Length = 933 Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 49/159 (30%), Positives = 75/159 (47%), Gaps = 26/159 (16%) Query: 760 YVP-CDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGL 818 YVP D + RE LE G + D T +E R AR + + ++GL Sbjct: 406 YVPQADPLHAQLTVREALEY---GAELRFPADTTAQERR---------ARVQEVIGELGL 453 Query: 819 TYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKL 878 T G + LSGG+ +R +A EL R +L LDEPT+GL A+ Q +++ L L Sbjct: 454 TA-HAGTPVSRLSGGQKKRTSVALELLTR---PSLLFLDEPTSGLDPANDQSVMETLKGL 509 Query: 879 R---------DQGNTIVVIEHNLDVIKTADWIVDLGPEG 908 + G T++V+ H++ + D+I+ L P G Sbjct: 510 AKGGGVGSADESGRTVIVVTHSVLFLDLCDYILVLAPGG 548 >UniRef50_A7MK51 Putative uncharacterized protein n=1 Tax=Cronobacter sakazakii ATCC BAA-894 RepID=A7MK51_ENTS8 Length = 449 Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 53/182 (29%), Positives = 85/182 (46%), Gaps = 27/182 (14%) Query: 487 LSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLR-DLGNTVIVVE 545 LSGG QR+ +AS I + + DEP+ L ++LG L L+ ++G V++V Sbjct: 62 LSGGMRQRVMIASAISGK--PDLLIADEPTTALDVTLQAQILGLLKDLQQEMGMGVLLVT 119 Query: 546 HDEDAI-RAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPES-LTGQYMSGKRKIEVPKK 603 HD + R AD ++GGE+V +GP+E + P++ T + ++ E P + Sbjct: 120 HDLSVVARYADR------ACVMNGGEIVEQGPVEPLFTSPQADWTRRLIAASTPQEPPAR 173 Query: 604 RVPANPEKVLKLTGA----------------RGNNLKDVTLTLPVGLFTCITGVSGSGKS 647 V N +L++TG R L T ++ G + G SGSGK+ Sbjct: 174 VVARNDTPLLQVTGIVKSFARRARLPFMPAERQRVLHPTTFSVARGEIVGLIGESGSGKT 233 Query: 648 TL 649 TL Sbjct: 234 TL 235 Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust. Identities = 53/184 (28%), Positives = 83/184 (45%), Gaps = 24/184 (13%) Query: 406 CASCEGTRLRREARHVYVENTPLPAISD-MSIGHAMEFFNNLKLAGQR--AKIAEKILKE 462 + E R+RR A+ ++ P ++ MS+G + L++ G R A IAE++ + Sbjct: 260 ASRTEQKRVRRRAQMIF--QDPYASLDPRMSVGD--QLAEPLRVHGLRHGAAIAERVSE- 314 Query: 463 IGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQR 522 + VGL R SGG+ QRI +A + L + V DE L Sbjct: 315 ------LMTLVGLKPEWAQRRPAAFSGGQRQRIAIARAL--ALEPELLVADEAVAALDLP 366 Query: 523 DNERLLGTLIHLRD-LGNTVIVVEHDEDAIRA-ADHVIDIGPGAGVHGGEVVAEGPLEAI 580 ++L L LRD LG +V+ + HD A+R D V+ + + G VV EGP + Sbjct: 367 VRGQILRLLAELRDKLGLSVLFISHDLQAVRQLCDRVLVL------YLGNVVEEGPTRQV 420 Query: 581 MAVP 584 + P Sbjct: 421 LQTP 424 >UniRef50_Q8PY26 Putative ABC transporter ATP-binding protein MM_1038 n=3 Tax=Methanosarcina RepID=Y1038_METMA Length = 287 Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 34/85 (40%), Positives = 47/85 (55%), Gaps = 3/85 (3%) Query: 808 RKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFAD 867 R + L L L + +LSGGE QRV LA L+ R +LDEP TGL A Sbjct: 117 RVFEALEAASLERSMLSRDPLSLSGGEMQRVALAGALALR---PDYLVLDEPITGLDPAG 173 Query: 868 IQQLLDVLHKLRDQGNTIVVIEHNL 892 +++L+ L K++ QG TI+ + HNL Sbjct: 174 KKEILETLKKIKGQGTTIITVTHNL 198 Score = 44.7 bits (104), Expect = 0.018, Method: Compositional matrix adjust. Identities = 28/68 (41%), Positives = 37/68 (54%), Gaps = 2/68 (2%) Query: 480 LSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGN 539 LSR +LSGGE QR+ LA + L VLDEP GL + +L TL ++ G Sbjct: 132 LSRDPLSLSGGEMQRVALAGALA--LRPDYLVLDEPITGLDPAGKKEILETLKKIKGQGT 189 Query: 540 TVIVVEHD 547 T+I V H+ Sbjct: 190 TIITVTHN 197 >UniRef50_UPI0000382FFE COG4559: ABC-type hemin transport system, ATPase component n=1 Tax=Magnetospirillum magnetotacticum MS-1 RepID=UPI0000382FFE Length = 203 Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 40/106 (37%), Positives = 52/106 (49%), Gaps = 12/106 (11%) Query: 825 QSATTLSGGEAQRVKLARELSKRGTGQTL-----YILDEPTTGLHFADIQQLLDVLHKLR 879 +S TLSGGE RV+ AR L + G+TL LDEPT L LLDV L Sbjct: 65 RSYPTLSGGEQARVQFARALCQLAAGRTLARQQVLFLDEPTASLDLRHQTALLDVAADLA 124 Query: 880 DQGNTIVVIEHNLDVIKT-ADWIVDLGPEGGSGGGEILVSGTPETV 924 G ++ I H+L++ AD ++ L G I+ G PETV Sbjct: 125 GAGTAVIAILHDLNLAAAYADELIAL------QAGRIVARGRPETV 164 >UniRef50_C0RL02 ABC transporter related protein n=27 Tax=Proteobacteria RepID=C0RL02_BRUMB Length = 339 Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 44/121 (36%), Positives = 61/121 (50%), Gaps = 8/121 (6%) Query: 777 EIKYKGKTIHEVLDMTIEEAREF----FDAVPALARKLQTLMDVGLTYIRLGQSATTLSG 832 E+ Y + D+TI E EF + P QTL ++GLT R GQ A TLSG Sbjct: 111 EVGYMTQRFSFYEDLTIAENLEFVARLYKLDPVKDHVAQTLDELGLT-TRGGQLAGTLSG 169 Query: 833 GEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNL 892 G QR+ LA + + L +LDEPT G+ + D +H+L D G T++V H + Sbjct: 170 GWKQRLALAACIMHK---PKLLLLDEPTAGVDPKARRDFWDEIHRLADGGLTVLVSTHYM 226 Query: 893 D 893 D Sbjct: 227 D 227 >UniRef50_D2SCY4 ABC transporter related protein n=2 Tax=Actinomycetales RepID=D2SCY4_9ACTO Length = 610 Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 43/122 (35%), Positives = 68/122 (55%), Gaps = 11/122 (9%) Query: 805 ALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLH 864 AL + L VGL + G A++LS G+ +R+++AR L+ +L ILDEP G++ Sbjct: 435 ALEHAARCLRRVGLGDLA-GNRASSLSYGDQRRLEIARALAAE---PSLLILDEPAAGMN 490 Query: 865 FADIQQLLDVLHKLRDQGNTIVVIEHNLD-VIKTADWIVDLGPEGGSGGGEILVSGTPET 923 + QL +++ L G TI+ IEHN+ V++T +V L GE++ SGTP Sbjct: 491 HVEAAQLSELIRSLAQGGLTILFIEHNVGMVLETCTRVVVL------DFGEVIASGTPAE 544 Query: 924 VA 925 +A Sbjct: 545 IA 546 >UniRef50_B8C0B8 ABC transporter n=1 Tax=Thalassiosira pseudonana RepID=B8C0B8_THAPS Length = 620 Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 42/128 (32%), Positives = 67/128 (52%), Gaps = 14/128 (10%) Query: 817 GLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLH 876 GL ++ +G++ LSGGE QR+ LAR L + L ILDEPT+ + ++D +H Sbjct: 503 GLDFV-VGRNGMRLSGGERQRIALARSLL---SDPCLLILDEPTSAMDAEGEGAVMDAVH 558 Query: 877 KLRD-QGNT---IVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHT 932 RD GN+ +++I H +K AD IV L G+I+ GT +T++ + S Sbjct: 559 ACRDGDGNSSRGLLLITHRASTLKVADLIVVLKD------GKIVEQGTFDTLSASKDSEL 612 Query: 933 ARFLKPML 940 + +L Sbjct: 613 CELMAELL 620 >UniRef50_Q12UN3 ABC transporter ATPase subunit n=1 Tax=Methanococcoides burtonii DSM 6242 RepID=Q12UN3_METBU Length = 268 Score = 57.0 bits (136), Expect = 3e-06, Method: Composition-based stats. Identities = 42/108 (38%), Positives = 57/108 (52%), Gaps = 10/108 (9%) Query: 816 VGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVL 875 VGL+ LG S +LSGGE + V LA LS + +LDEPT+GL + L L Sbjct: 120 VGLSSDILGSSPFSLSGGEMRLVALAGVLS---SSPDYLVLDEPTSGLSTFYKEHLFKTL 176 Query: 876 HKLRDQGNTIVVIEHNL-DVIKTADWIVDLGPEGGSGGGEILVSGTPE 922 LR G +V++ H+L DV+ AD IV L G ++ G+PE Sbjct: 177 ELLRQNGVGVVLVSHHLEDVLGVADKIVYLNE------GAVVFEGSPE 218 Score = 48.9 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 41/112 (36%), Positives = 56/112 (50%), Gaps = 8/112 (7%) Query: 464 GDRLKFLVN-----VGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIG 518 GD L+ V+ VGL+ L S +LSGGE + + LA + + VLDEP+ G Sbjct: 106 GDELEHCVHDAIEKVGLSSDILGSSPFSLSGGEMRLVALAGVLSSS--PDYLVLDEPTSG 163 Query: 519 LHQRDNERLLGTLIHLRDLGNTVIVVEHD-EDAIRAADHVIDIGPGAGVHGG 569 L E L TL LR G V++V H ED + AD ++ + GA V G Sbjct: 164 LSTFYKEHLFKTLELLRQNGVGVVLVSHHLEDVLGVADKIVYLNEGAVVFEG 215 >UniRef50_C0W300 ABC superfamily ATP binding cassette transporter, ABC protein n=1 Tax=Actinomyces urogenitalis DSM 15434 RepID=C0W300_9ACTO Length = 744 Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 41/115 (35%), Positives = 62/115 (53%), Gaps = 10/115 (8%) Query: 811 QTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQ 870 Q L VGL R G LSGG+ QR+ LA ++ R + ILDEPT+ + A Q Sbjct: 146 QALAAVGLAE-RAGWDPWRLSGGQRQRLSLACAIAMR---PEVLILDEPTSMIDPAGTQA 201 Query: 871 LLDVLHKLRDQGNTIVVIEHNLD-VIKTADWIVDLGPEGGSGGGEILVSGTPETV 924 ++L L G +VVI+H+LD +++ D ++ L +G +L +G+PE V Sbjct: 202 FYEMLRPLCGSGTGVVVIDHDLDPIVQNLDAVLCLDADGA-----VLATGSPEEV 251 Score = 45.8 bits (107), Expect = 0.009, Method: Compositional matrix adjust. Identities = 24/68 (35%), Positives = 42/68 (61%), Gaps = 3/68 (4%) Query: 829 TLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVI 888 TLSGGEA+R+ +A + G+ + + +LDEPT G A+ +LL + + + G T+V+ Sbjct: 424 TLSGGEARRLSVA---TVSGSQRPVLLLDEPTYGQDEANATELLGFIQERQHSGQTVVMA 480 Query: 889 EHNLDVIK 896 H++D + Sbjct: 481 THDIDAAR 488 Score = 43.1 bits (100), Expect = 0.055, Method: Compositional matrix adjust. Identities = 26/67 (38%), Positives = 40/67 (59%), Gaps = 2/67 (2%) Query: 486 TLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVE 545 TLSGGEA+R+ +A+ G+ + +LDEP+ G + + LLG + + G TV++ Sbjct: 424 TLSGGEARRLSVATVSGSQRP--VLLLDEPTYGQDEANATELLGFIQERQHSGQTVVMAT 481 Query: 546 HDEDAIR 552 HD DA R Sbjct: 482 HDIDAAR 488 Score = 42.7 bits (99), Expect = 0.065, Method: Compositional matrix adjust. Identities = 67/254 (26%), Positives = 106/254 (41%), Gaps = 37/254 (14%) Query: 422 YVENTPLPAISDMSIGHAMEF-FNNLKLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTL 480 YV P ++ +I + + F NL+LA E+I +G + L VGL Sbjct: 108 YVGQNPDASVVTQTIFNEVAFGLQNLRLA------PEEIETRVG---QALAAVGLAERA- 157 Query: 481 SRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNT 540 LSGG+ QR+ LA I + + +LDEP+ + + L L G Sbjct: 158 GWDPWRLSGGQRQRLSLACAIA--MRPEVLILDEPTSMIDPAGTQAFYEMLRPLCGSGTG 215 Query: 541 VIVVEHDEDAI-RAADHVIDI-GPGAGVHGG--EVVAEGPLEAIMAVPESLTGQYMSGKR 596 V+V++HD D I + D V+ + GA + G E V G E + A L Y R Sbjct: 216 VVVIDHDLDPIVQNLDAVLCLDADGAVLATGSPEEVFGGHREELKAAGVWLPSAYRDEPR 275 Query: 597 KIEVPKKRVPA-------------------NPEKVLKLTGARGNN-LKDVTLTLPVGLFT 636 + +P + P+ + E VL L + +V+L++ G Sbjct: 276 QTALPALKDPSAVGYLQRDGQEWTQVEALGSDEPVLSLDAVSVDGRCPEVSLSVGAGELV 335 Query: 637 CITGVSGSGKSTLI 650 + G +GSGKS+L+ Sbjct: 336 AVVGTNGSGKSSLL 349 >UniRef50_D1XB93 ABC transporter related protein n=6 Tax=Streptomyces RepID=D1XB93_9ACTO Length = 674 Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 36/101 (35%), Positives = 56/101 (55%), Gaps = 9/101 (8%) Query: 801 DAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPT 860 + V +L R L TL+ G + +SGG Q+V LAR ++G + I+DEPT Sbjct: 515 EVVSSLPRGLDTLLARGY------KGGHEISGGMWQKVGLARARHRQGQ---VLIVDEPT 565 Query: 861 TGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADWI 901 + L A Q++ D +H+L +G T V+I H L ++ AD+I Sbjct: 566 SALDPAAEQRVFDQIHRLSGEGQTTVLITHRLHSVRDADYI 606 >UniRef50_C4FAN6 Putative uncharacterized protein n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4FAN6_9ACTN Length = 558 Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 41/121 (33%), Positives = 68/121 (56%), Gaps = 12/121 (9%) Query: 807 ARKLQTLMDVGLTYIR--LGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLH 864 +R + L+ V LT L +S +LSGG+ + V LA L+ R Q + +LDEP GL Sbjct: 430 SRVCEALVSVNLTPTDELLARSPFSLSGGQQRSVALAGVLAMR---QDVLVLDEPMAGLD 486 Query: 865 FADIQQLLDVLHKLRDQGNTIVVIEHNL-DVIKTADWIVDLGPEGGSGGGEILVSGTPET 923 +++ D+LH L+ G+T++++ H++ DV + AD ++ L G L+SG+P Sbjct: 487 PDGRRRVRDLLHALKHAGSTLIMVTHSMEDVAELADHVIVL------ERGRALLSGSPAE 540 Query: 924 V 924 V Sbjct: 541 V 541 Score = 44.3 bits (103), Expect = 0.025, Method: Compositional matrix adjust. Identities = 33/89 (37%), Positives = 47/89 (52%), Gaps = 3/89 (3%) Query: 471 VNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGT 530 VN+ L+RS +LSGG+ + + LA + + + VLDEP GL R+ Sbjct: 439 VNLTPTDELLARSPFSLSGGQQRSVALAGVLA--MRQDVLVLDEPMAGLDPDGRRRVRDL 496 Query: 531 LIHLRDLGNTVIVVEHD-EDAIRAADHVI 558 L L+ G+T+I+V H ED ADHVI Sbjct: 497 LHALKHAGSTLIMVTHSMEDVAELADHVI 525 >UniRef50_A9WBR9 ABC transporter related n=4 Tax=Chloroflexi (class) RepID=A9WBR9_CHLAA Length = 537 Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 37/93 (39%), Positives = 54/93 (58%), Gaps = 10/93 (10%) Query: 829 TLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVI 888 +LSGGEAQR LA L+ G Q L +LDEPT GL + L+D L L G T+++ Sbjct: 415 SLSGGEAQRAALAASLA--GDPQ-LILLDEPTRGLDYHAKHALIDTLRSLCRDGRTVIMA 471 Query: 889 EHNLDVIKT-ADWIVDLGPEGGSGGGEILVSGT 920 H+++++ ADW+V L GE++V G+ Sbjct: 472 THDVELVAACADWVVLL------SEGEVVVEGS 498 Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 56/190 (29%), Positives = 89/190 (46%), Gaps = 24/190 (12%) Query: 418 ARHV-YVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNVGLN 476 ARHV YV P + ++ + F L G+R + +++I R + +N Sbjct: 357 ARHVAYVPQQPRSILFHDTLEEEIAF----SLRGRRLSPTQSAIRDILTRFR------IN 406 Query: 477 YLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRD 536 +L ++R +LSGGEAQR LA+ + + +LDEP+ GL L+ TL L Sbjct: 407 HL-IARYPRSLSGGEAQRAALAASLAGD--PQLILLDEPTRGLDYHAKHALIDTLRSLCR 463 Query: 537 LGNTVIVVEHDEDAIRA-ADHVIDIGPGAGVHGGEVVAEGPLEAIMA---VPESLTGQYM 592 G TVI+ HD + + A AD V+ + GEVV EG ++ + S + Sbjct: 464 DGRTVIMATHDVELVAACADWVVLLS------EGEVVVEGSTADLLGNSLIFSSQIAKLF 517 Query: 593 SGKRKIEVPK 602 G+ + VP+ Sbjct: 518 PGQGWLTVPQ 527 Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 42/113 (37%), Positives = 67/113 (59%), Gaps = 7/113 (6%) Query: 804 PALARKLQTLMD-VGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTG 862 P + R+++ ++D + + ++R + TLSGGE QRV +A L+ + + +LDEPT+ Sbjct: 116 PMMRRRVEEVLDQLAIAHLR-HRHVATLSGGEQQRVAIAAALAAQ---PRVLVLDEPTSQ 171 Query: 863 LHFADIQQLLDVLHKLR-DQGNTIVVIEHNLD-VIKTADWIVDLGPEGGSGGG 913 L +++L L KL D G TIV+ EH L+ V++ AD I+ L P G S G Sbjct: 172 LDPHGAEEVLTALQKLNSDLGITIVLCEHRLERVVQYADRILYLSPNGESDLG 224 Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust. Identities = 62/196 (31%), Positives = 94/196 (47%), Gaps = 30/196 (15%) Query: 482 RSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLR-DLGNT 540 R TLSGGE QR+ +A+ + A + VLDEP+ L E +L L L DLG T Sbjct: 137 RHVATLSGGEQQRVAIAAALAAQ--PRVLVLDEPTSQLDPHGAEEVLTALQKLNSDLGIT 194 Query: 541 VIVVEHD-EDAIRAADHVIDIGPGAGVHGG---EVVAE----GPLEAIMAV----PESLT 588 +++ EH E ++ AD ++ + P G EV++ PL+ + AV P LT Sbjct: 195 IVLCEHRLERVVQYADRILYLSPNGESDLGPPREVLSRIDLRPPLQHLGAVLGWQPLPLT 254 Query: 589 GQYMSGKRKI--EVPKKRVPANPE---------KVLKLTGARGNN--LKDVTLTLPVGLF 635 G++ + ++P PA+P ++ +T G + L V L LP G Sbjct: 255 --IKEGRKFVPSDLPDFTSPASPSPPTTTAPIARLRNVTVRYGQHEALYRVQLDLPRGAL 312 Query: 636 TCITGVSGSGKSTLIN 651 + G +GSGKSTL+ Sbjct: 313 IALMGRNGSGKSTLLK 328 >UniRef50_C7Q6Y6 FHA modulated ABC efflux pump with fused ATPase and integral membrane subunits n=6 Tax=Actinomycetales RepID=C7Q6Y6_CATAD Length = 777 Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 38/111 (34%), Positives = 63/111 (56%), Gaps = 9/111 (8%) Query: 811 QTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQ 870 + + ++GLT R Q ++LSGG+ +RV +A EL T +L LDEPT+GL + Sbjct: 343 EVITELGLTQ-RADQVISSLSGGQRKRVSVALELL---TKPSLLFLDEPTSGLDPGMDRS 398 Query: 871 LLDVLHKLRDQGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTP 921 ++ +L +L D G T++V+ H++ ++ D ++ L P GG I G P Sbjct: 399 VMHLLRRLADDGRTVIVVTHSVLNLEVCDRLLVLAP-----GGRIAYFGPP 444 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P0A196 UvrABC system protein A n=175 Tax=Bacteria RepID... 1461 0.0 UniRef50_Q8ZJ07 UvrABC system protein A n=84 Tax=Bacteria RepID=... 1418 0.0 UniRef50_P44410 UvrABC system protein A n=133 Tax=cellular organ... 1396 0.0 UniRef50_Q88QK7 UvrABC system protein A n=91 Tax=cellular organi... 1383 0.0 UniRef50_Q87BK9 UvrABC system protein A n=247 Tax=cellular organ... 1335 0.0 UniRef50_C9KNX7 Excinuclease ABC subunit A n=2 Tax=Bacteria RepI... 1324 0.0 UniRef50_Q5HHQ9 UvrABC system protein A n=172 Tax=cellular organ... 1318 0.0 UniRef50_Q8ENJ6 UvrABC system protein A n=258 Tax=cellular organ... 1317 0.0 UniRef50_A5WGZ4 Excinuclease ABC subunit A n=24 Tax=Bacteria Rep... 1313 0.0 UniRef50_D2RIL7 Excinuclease ABC, A subunit n=3 Tax=Bacteria Rep... 1305 0.0 UniRef50_Q56242 UvrABC system protein A n=60 Tax=cellular organi... 1292 0.0 UniRef50_O31151 UvrABC system protein A n=81 Tax=Bacteria RepID=... 1292 0.0 UniRef50_Q71WU0 UvrABC system protein A n=44 Tax=Bacteria RepID=... 1289 0.0 UniRef50_C7N595 Excinuclease ABC subunit A n=57 Tax=Bacteria Rep... 1283 0.0 UniRef50_O26543 UvrABC system protein A n=86 Tax=cellular organi... 1274 0.0 UniRef50_P63385 UvrABC system protein A n=172 Tax=cellular organ... 1271 0.0 UniRef50_A8ID62 Excinuclease ABC A subunit n=66 Tax=Bacteria Rep... 1269 0.0 UniRef50_Q8UF86 UvrABC system protein A n=78 Tax=cellular organi... 1268 0.0 UniRef50_Q2YPX5 UvrABC system protein A n=164 Tax=root RepID=UVR... 1267 0.0 UniRef50_P63381 UvrABC system protein A n=53 Tax=Bacteria RepID=... 1264 0.0 UniRef50_O66911 UvrABC system protein A n=11 Tax=cellular organi... 1250 0.0 UniRef50_A7NS89 Excinuclease ABC, A subunit n=3 Tax=Bacteria Rep... 1246 0.0 UniRef50_Q46577 UvrABC system protein A n=5 Tax=Bacteria RepID=U... 1245 0.0 UniRef50_Q21RX9 Excinuclease ABC subunit A n=19 Tax=Bacteria Rep... 1239 0.0 UniRef50_Q9WYV0 UvrABC system protein A n=8 Tax=Bacteria RepID=U... 1237 0.0 UniRef50_A2C5J2 Excinuclease ABC, A subunit, ATP/GTP-binding sit... 1232 0.0 UniRef50_D0MK77 Excinuclease ABC, A subunit n=2 Tax=Bacteroidete... 1230 0.0 UniRef50_A6DP81 Excinuclease ABC, A subunit n=3 Tax=Bacteria Rep... 1195 0.0 UniRef50_Q1MP46 Excinuclease ABC, A subunit n=2 Tax=Bacteria Rep... 1184 0.0 UniRef50_Q30YG3 Excinuclease ABC subunit A n=3 Tax=Bacteria RepI... 1183 0.0 UniRef50_D1PT12 Excision endonuclease subunit UvrA n=3 Tax=Bacte... 1177 0.0 UniRef50_D2QY36 Excinuclease ABC, A subunit n=1 Tax=Pirellula st... 1174 0.0 UniRef50_Q2SR90 Excinuclease ABC, A subunit n=5 Tax=Bacteria Rep... 1171 0.0 UniRef50_Q2RZZ5 Excinuclease ABC, A subunit n=1 Tax=Salinibacter... 1157 0.0 UniRef50_P47660 UvrABC system protein A n=6 Tax=Bacteria RepID=U... 1157 0.0 UniRef50_B6WY93 Putative uncharacterized protein n=1 Tax=Desulfo... 1152 0.0 UniRef50_C1ZII9 UvrA family protein n=39 Tax=Bacteria RepID=C1ZI... 1148 0.0 UniRef50_C0QY85 Exinuclease ABC subunit A n=6 Tax=Bacteria RepID... 1147 0.0 UniRef50_B6YRR0 Excinuclease ABC subunit A n=1 Tax=Candidatus Az... 1140 0.0 UniRef50_B8DJB0 Excinuclease ABC, A subunit n=2 Tax=Desulfovibri... 1138 0.0 UniRef50_Q83NI8 Excinuclease ABC subunit A n=2 Tax=Tropheryma wh... 1132 0.0 UniRef50_Q30RE0 Excinuclease ABC subunit A n=21 Tax=Campylobacte... 1127 0.0 UniRef50_Q1PVF8 Strongly similar to exinuclease ABC, protein A n... 1121 0.0 UniRef50_C2NRS3 Excinuclease ABC, A subunit n=2 Tax=Bacillus cer... 1121 0.0 UniRef50_C1F8N8 Excinuclease ABC, A subunit n=1 Tax=Acidobacteri... 1119 0.0 UniRef50_Q6SI25 Excinuclease ABC, A subunit n=1 Tax=uncultured m... 1115 0.0 UniRef50_Q2NJE0 Excinuclease ABC subunit A n=3 Tax=Candidatus Ph... 1114 0.0 UniRef50_Q01SK3 Excinuclease ABC subunit A n=20 Tax=Bacteria Rep... 1105 0.0 UniRef50_Q2S5D7 Excinuclease ABC, A subunit n=3 Tax=Bacteria Rep... 1092 0.0 UniRef50_B3DYB1 Excinuclease ABC subunit A, ATPase n=4 Tax=Bacte... 1092 0.0 UniRef50_B3QT58 Excinuclease ABC, A subunit n=23 Tax=Bacteroidet... 1085 0.0 UniRef50_D0LQB5 Excinuclease ABC, A subunit n=1 Tax=Haliangium o... 1082 0.0 UniRef50_B5JM86 Excinuclease ABC, A subunit n=1 Tax=Verrucomicro... 1081 0.0 UniRef50_B8I0Z8 Excinuclease ABC, A subunit n=1 Tax=Clostridium ... 1081 0.0 UniRef50_C1A9P0 UvrABC system protein A n=1 Tax=Gemmatimonas aur... 1081 0.0 UniRef50_Q027K1 Excinuclease ABC subunit A n=2 Tax=Bacteria RepI... 1079 0.0 UniRef50_C9PZ01 Excision endonuclease subunit UvrA n=8 Tax=Bacte... 1072 0.0 UniRef50_Q3B5F8 Excinuclease ABC subunit A n=11 Tax=Chlorobiacea... 1068 0.0 UniRef50_A3ZSW8 Excinuclease ABC subunit A n=1 Tax=Blastopirellu... 1068 0.0 UniRef50_C0ABC8 Excinuclease ABC, A subunit n=1 Tax=Opitutaceae ... 1059 0.0 UniRef50_B2RMJ8 Excinuclease ABC A subunit n=30 Tax=Bacteria Rep... 1055 0.0 UniRef50_Q6MRC9 Excinuclease ABC subunit A n=1 Tax=Bdellovibrio ... 1051 0.0 UniRef50_C2M987 Excinuclease ABC subunit A n=1 Tax=Porphyromonas... 1048 0.0 UniRef50_C6VXN3 Excinuclease ABC, A subunit n=3 Tax=Bacteroidete... 1026 0.0 UniRef50_C7I293 Excinuclease ABC, A subunit n=1 Tax=Thiomonas in... 1022 0.0 UniRef50_D2QFW0 Excinuclease ABC, A subunit n=2 Tax=Bacteroidete... 1021 0.0 UniRef50_A4BKX6 Excinuclease ABC, A subunit n=4 Tax=Proteobacter... 1019 0.0 UniRef50_B2UPV5 Excinuclease ABC, A subunit n=5 Tax=Bacteria Rep... 1016 0.0 UniRef50_D2R1K2 Excinuclease ABC, A subunit n=1 Tax=Pirellula st... 1016 0.0 UniRef50_B1ZMZ6 Excinuclease ABC, A subunit n=1 Tax=Opitutus ter... 1013 0.0 UniRef50_B1XYK7 Excinuclease ABC, A subunit n=2 Tax=Burkholderia... 1012 0.0 UniRef50_A0LG77 UvrA family protein n=1 Tax=Syntrophobacter fuma... 1012 0.0 UniRef50_Q21RT9 UvrA family protein n=4 Tax=Bacteria RepID=Q21RT... 1007 0.0 UniRef50_Q124L1 UvrA family protein n=23 Tax=cellular organisms ... 995 0.0 UniRef50_B5YG61 Excinuclease ABC, A subunit n=1 Tax=Thermodesulf... 994 0.0 UniRef50_B8GRH5 Excinuclease ABC, A subunit n=10 Tax=Bacteria Re... 990 0.0 UniRef50_Q7URK7 Excinuclease ABC subunit A n=1 Tax=Rhodopirellul... 989 0.0 UniRef50_B9XQK9 Excinuclease ABC, A subunit n=3 Tax=Bacteria Rep... 987 0.0 UniRef50_A1WZ98 UvrA family protein n=2 Tax=Proteobacteria RepID... 978 0.0 UniRef50_C0ADS9 Excinuclease ABC, A subunit n=1 Tax=Opitutaceae ... 968 0.0 UniRef50_B5JNR8 Excinuclease ABC, A subunit, putative n=1 Tax=Ve... 966 0.0 UniRef50_B1ZV20 Excinuclease ABC, A subunit n=5 Tax=Bacteria Rep... 960 0.0 UniRef50_A9G6R8 Excinuclease ABC subunit A n=1 Tax=Sorangium cel... 955 0.0 UniRef50_B3DZR5 Excinuclease ABC subunit A, ATPase n=1 Tax=Methy... 955 0.0 UniRef50_Q2T972 Excinuclease ABC, subunit A, form 2 n=56 Tax=Bac... 955 0.0 UniRef50_Q1D9R5 UvrABC system, A protein n=2 Tax=Cystobacterinea... 942 0.0 UniRef50_Q6MBT0 Putative excinuclease ABC chain A n=1 Tax=Candid... 941 0.0 UniRef50_Q0A6L0 Excinuclease ABC, A subunit n=4 Tax=Bacteria Rep... 929 0.0 UniRef50_D0LX97 Excinuclease ABC, A subunit n=1 Tax=Haliangium o... 911 0.0 UniRef50_C4ZKV2 Excinuclease ABC, A subunit n=1 Tax=Thauera sp. ... 908 0.0 UniRef50_Q9PK60 UvrABC system protein A n=10 Tax=Chlamydia RepID... 893 0.0 UniRef50_Q9Z985 UvrABC system protein A n=5 Tax=Chlamydophila Re... 880 0.0 UniRef50_C9YE98 Putative uncharacterized protein n=1 Tax=Curviba... 865 0.0 UniRef50_C4RNF2 Excinuclease ABC, A subunit n=1 Tax=Micromonospo... 861 0.0 UniRef50_Q0W0L7 Excinuclease ABC, ATPase subunit n=3 Tax=cellula... 805 0.0 UniRef50_B6W740 Putative uncharacterized protein n=1 Tax=Anaeroc... 785 0.0 UniRef50_B2T6A1 Excinuclease ABC, A subunit n=34 Tax=Bacteria Re... 762 0.0 UniRef50_B6A038 Excinuclease ABC, A subunit n=8 Tax=Bacteria Rep... 758 0.0 UniRef50_Q9RCZ2 Putative excinuclease ABC subunit A n=3 Tax=Stre... 752 0.0 UniRef50_Q18CU1 Putative DNA repair protein n=6 Tax=Clostridium ... 750 0.0 UniRef50_B4V5Y5 Excinuclease ABC subunit A n=1 Tax=Streptomyces ... 746 0.0 UniRef50_D2AS77 Excinuclease ABC subunit A n=1 Tax=Streptosporan... 745 0.0 UniRef50_A1SWH0 Excinuclease ABC, A subunit n=15 Tax=Bacteria Re... 742 0.0 UniRef50_D1BHG7 Excinuclease ABC, A subunit n=1 Tax=Sanguibacter... 734 0.0 UniRef50_B8FST5 ABC transporter related n=5 Tax=Firmicutes RepID... 733 0.0 UniRef50_A8MGE0 Excinuclease ABC, A subunit n=1 Tax=Alkaliphilus... 728 0.0 UniRef50_B1L257 Excinuclease ABC, A subunit n=1 Tax=Clostridium ... 725 0.0 UniRef50_Q6MKF2 Excinuclease ABC subunit A n=1 Tax=Bdellovibrio ... 710 0.0 UniRef50_C8VVR7 ABC transporter related n=1 Tax=Desulfotomaculum... 708 0.0 UniRef50_C6R915 UvrABC system protein A n=2 Tax=Corynebacterium ... 707 0.0 UniRef50_A1TP16 Excinuclease ABC, A subunit n=4 Tax=Bacteria Rep... 704 0.0 UniRef50_C3RJK4 Excinuclease ABC subunit A n=2 Tax=Bacteria RepI... 697 0.0 UniRef50_B5YKV1 Excinuclease ABC, A subunit n=1 Tax=Thermodesulf... 695 0.0 UniRef50_C3PKK6 Excinuclease ABC, subunit A n=10 Tax=Actinomycet... 693 0.0 UniRef50_Q5WJS0 Excinuclease ABC subunit A n=38 Tax=cellular org... 690 0.0 UniRef50_Q041B5 Excinuclease ATPase subunit n=53 Tax=Lactobacill... 689 0.0 UniRef50_B1VG20 Excinuclease ABC, subunit A n=2 Tax=Actinomyceta... 687 0.0 UniRef50_D1JG21 Putative uncharacterized protein n=1 Tax=uncultu... 686 0.0 UniRef50_B1KRA3 ABC transporter related n=1 Tax=Shewanella woody... 683 0.0 UniRef50_A6TUU6 ABC transporter related n=1 Tax=Alkaliphilus met... 680 0.0 UniRef50_D2ATA6 Excinuclease ABC, A subunit n=4 Tax=Actinomyceta... 673 0.0 UniRef50_A0LIN7 Excinuclease ABC subunit A n=1 Tax=Syntrophobact... 663 0.0 UniRef50_A5LJ87 Excinuclease ABC subunit A n=13 Tax=Bacilli RepI... 653 0.0 UniRef50_C8PNC0 UvrABC system protein A n=4 Tax=cellular organis... 650 0.0 UniRef50_C9XKB3 Putative antibiotic resistance ABC transporter, ... 650 0.0 UniRef50_C4DT53 Excinuclease ATPase subunit n=3 Tax=Bacteria Rep... 647 0.0 UniRef50_C1B8F2 UvrA-like protein n=57 Tax=Bacteria RepID=C1B8F2... 647 0.0 UniRef50_C2ENC0 Excinuclease subunit A n=1 Tax=Lactobacillus ult... 641 0.0 UniRef50_C5C6C3 ABC transporter related n=3 Tax=Actinomycetales ... 638 0.0 UniRef50_Q039P8 Excinuclease ATPase subunit n=56 Tax=Bacteria Re... 634 e-180 UniRef50_A6VRX7 ABC transporter related n=4 Tax=Bacteria RepID=A... 632 e-179 UniRef50_C2HBQ4 Excinuclease subunit A n=4 Tax=Enterococcus faec... 631 e-179 UniRef50_C7PP78 ABC transporter related n=6 Tax=Bacteria RepID=C... 630 e-178 UniRef50_A6CCN1 Excinuclease ABC subunit A n=1 Tax=Planctomyces ... 620 e-175 UniRef50_A1SIJ3 ABC transporter related n=10 Tax=Bacteria RepID=... 618 e-175 UniRef50_C0VYB5 Excinuclease subunit A n=1 Tax=Actinomyces coleo... 615 e-174 UniRef50_Q49WT2 Excinuclease ATPase subunit n=16 Tax=Staphylococ... 614 e-174 UniRef50_Q7UK42 Excinuclease ABC subunit A n=1 Tax=Rhodopirellul... 614 e-174 UniRef50_A6BZF4 Excinuclease ABC subunit A n=1 Tax=Planctomyces ... 613 e-174 UniRef50_B1KWH8 Excinuclease ABC, A subunit n=7 Tax=Clostridium ... 609 e-172 UniRef50_D2Q2S9 ABC transporter related protein n=6 Tax=Bacteria... 609 e-172 UniRef50_B8I5E2 ABC transporter related n=4 Tax=Clostridium RepI... 608 e-172 UniRef50_A6VPU1 ABC transporter related n=1 Tax=Actinobacillus s... 607 e-172 UniRef50_C7NL29 Excinuclease ATPase subunit n=1 Tax=Kytococcus s... 606 e-171 UniRef50_B7GTR5 ABC transporter related n=26 Tax=Bacteria RepID=... 605 e-171 UniRef50_D1AQT8 ABC transporter related protein n=1 Tax=Sebaldel... 602 e-170 UniRef50_B2UL01 Excinuclease ABC, A subunit n=1 Tax=Akkermansia ... 599 e-169 UniRef50_C7FPB9 Excinuclease ATPase subunit n=1 Tax=uncultured b... 596 e-168 UniRef50_C8NMU6 Excinuclease ABC, A subunit n=91 Tax=Bacteria Re... 585 e-165 UniRef50_UPI0001BC2CF0 putative excinuclease ABC subunit A n=1 T... 585 e-165 UniRef50_B4CXL9 ABC transporter-related protein n=1 Tax=Chthonio... 582 e-164 UniRef50_Q6A9D4 UvrA-like ABC transporter n=2 Tax=Propionibacter... 566 e-159 UniRef50_A9U6S5 Predicted protein (Fragment) n=6 Tax=cellular or... 565 e-159 UniRef50_UPI00019058DE excinuclease ABC subunit A n=1 Tax=Rhizob... 551 e-155 UniRef50_A0M2R3 UvrABC system protein A-like n=1 Tax=Gramella fo... 550 e-155 UniRef50_B9XUD5 Putative uncharacterized protein n=2 Tax=Helicob... 546 e-153 UniRef50_UPI0001B5406F UvrA-like protein n=1 Tax=Streptomyces sp... 541 e-152 UniRef50_P52087 UvrABC system protein A (Fragment) n=44 Tax=Bact... 523 e-146 UniRef50_UPI00004C267E COG0178: Excinuclease ATPase subunit n=1 ... 519 e-145 UniRef50_C1ZJW2 Excinuclease ATPase subunit n=1 Tax=Planctomyces... 497 e-138 UniRef50_C9RLN7 ABC transporter related protein n=1 Tax=Fibrobac... 445 e-123 UniRef50_Q92AV6 Lin1813 protein n=1 Tax=Listeria innocua RepID=Q... 427 e-117 UniRef50_C1ZCR5 Excinuclease ATPase subunit n=1 Tax=Planctomyces... 408 e-112 UniRef50_A2V167 ABC transporter related n=1 Tax=Shewanella putre... 396 e-108 UniRef50_C6CND4 ABC transporter related n=1 Tax=Dickeya zeae Ech... 393 e-107 UniRef50_Q4JUN2 Excinuclease ABC, subunit A n=2 Tax=Corynebacter... 381 e-104 UniRef50_B3SEI3 Putative uncharacterized protein (Fragment) n=1 ... 377 e-102 UniRef50_C9RP94 Excinuclease ATPase subunit-like protein n=1 Tax... 358 7e-97 UniRef50_B6W739 Putative uncharacterized protein n=1 Tax=Anaeroc... 305 5e-81 UniRef50_O26254 Methyl coenzyme M reductase system, component A2... 230 1e-58 UniRef50_A9VGN1 ABC transporter related n=62 Tax=Bacillaceae Rep... 195 5e-48 UniRef50_C0XR98 Possible excinuclease ABC, subunit A n=1 Tax=Cor... 189 3e-46 UniRef50_C3PL69 Putative ABC transport system n=1 Tax=Corynebact... 177 2e-42 UniRef50_D1YY55 ABC transporter ATP binding protein n=1 Tax=Meth... 172 7e-41 UniRef50_Q28MT7 ABC transporter related n=1 Tax=Jannaschia sp. C... 170 2e-40 UniRef50_A8LNW8 Ribose/xylose/arabinose/galactoside ABC-type tra... 168 8e-40 UniRef50_D1ZX13 C-terminus not complete (Fragment) n=1 Tax=Sorda... 167 1e-39 UniRef50_C5C220 ABC transporter related n=2 Tax=Actinobacteria (... 165 8e-39 UniRef50_C8W139 ABC transporter related n=1 Tax=Desulfotomaculum... 160 4e-37 UniRef50_UPI00019113E5 excinuclease ABC subunit A n=2 Tax=Salmon... 157 2e-36 UniRef50_A7BNZ1 Excinuclease ABC subunit A n=1 Tax=Beggiatoa sp.... 155 9e-36 UniRef50_A4FJ61 Peptide ABC transporter, ATP-binding protein n=4... 149 5e-34 UniRef50_D0VX13 Geobacillus stearothermophilus UvrA interaction ... 142 6e-32 UniRef50_A1RW97 ABC transporter related n=1 Tax=Thermofilum pend... 138 1e-30 UniRef50_C2BVY8 ABC superfamily ATP binding cassette transporter... 138 1e-30 UniRef50_A1A209 Cobalt import ATP-binding/permease protein cbiO ... 136 4e-30 UniRef50_UPI0001C36863 ABC transporter, ATP-binding protein n=1 ... 135 6e-30 UniRef50_C8W1V3 ABC transporter related n=1 Tax=Desulfotomaculum... 133 2e-29 UniRef50_C4F9Q6 Putative uncharacterized protein n=1 Tax=Collins... 133 3e-29 UniRef50_C9RX51 ABC transporter related protein n=4 Tax=Geobacil... 133 3e-29 UniRef50_Q7WNN2 Probable ATP-binding component of ABC transporte... 133 4e-29 UniRef50_Q8TQW9 Putative ABC transporter ATP-binding protein MA_... 132 5e-29 UniRef50_B6XUE0 Putative uncharacterized protein n=2 Tax=Bifidob... 132 7e-29 UniRef50_B9JQI4 ABC transporter, ATP-binding protein n=1 Tax=Agr... 131 1e-28 UniRef50_A7BDU3 Putative uncharacterized protein n=1 Tax=Actinom... 130 2e-28 UniRef50_B9Y318 Putative uncharacterized protein (Fragment) n=1 ... 130 3e-28 UniRef50_C9LBL6 ABC transporter, ATP-binding protein n=7 Tax=Clo... 129 4e-28 UniRef50_B7R619 ABC transporter, ATP-binding protein n=1 Tax=Car... 129 4e-28 UniRef50_C5D6I7 ABC transporter related n=1 Tax=Geobacillus sp. ... 128 9e-28 UniRef50_A6NVD9 Putative uncharacterized protein n=2 Tax=Bactero... 128 9e-28 UniRef50_Q5YXV6 Putative ABC transporter ATP-binding protein n=1... 128 1e-27 UniRef50_D1C296 ABC transporter related protein n=1 Tax=Sphaerob... 128 1e-27 UniRef50_A7MK51 Putative uncharacterized protein n=1 Tax=Cronoba... 127 2e-27 UniRef50_B9KXK3 ABC transporter, ATP-binding protein n=1 Tax=The... 126 3e-27 UniRef50_B5I5X3 Phosphate ABC transporter n=1 Tax=Streptomyces s... 126 4e-27 UniRef50_Q6NK67 Putative membrane protein n=1 Tax=Corynebacteriu... 126 4e-27 UniRef50_A9WT53 ABC transporter ATP-binding protein n=1 Tax=Reni... 126 4e-27 UniRef50_A8RPD7 Putative uncharacterized protein n=1 Tax=Clostri... 125 6e-27 UniRef50_B0PG52 Putative uncharacterized protein n=2 Tax=Clostri... 125 7e-27 UniRef50_Q01NP8 ABC transporter related n=1 Tax=Candidatus Solib... 125 1e-26 UniRef50_A7BC11 Putative uncharacterized protein n=1 Tax=Actinom... 125 1e-26 UniRef50_Q97WT4 Putative ABC transporter ATP-binding protein SSO... 125 1e-26 UniRef50_Q5WD41 Multidrug ABC transporter ATP-binding protein n=... 124 1e-26 UniRef50_C0C2X8 Putative uncharacterized protein n=2 Tax=Clostri... 124 1e-26 UniRef50_D2LY61 ABC transporter related protein n=2 Tax=Firmicut... 124 1e-26 UniRef50_D1AWW4 ABC transporter related protein n=9 Tax=Fusobact... 124 2e-26 UniRef50_B9E9M0 Putative uncharacterized protein n=1 Tax=Macroco... 124 2e-26 Sequences not found previously or not previously below threshold: UniRef50_A4EWE8 Oligopeptide/dipeptide uptake family ABC transpo... 180 3e-43 UniRef50_Q12GF5 ABC transporter related n=28 Tax=Proteobacteria ... 173 4e-41 UniRef50_A3VG48 ABC oligopeptide transporter, fused ATPase subun... 172 8e-41 UniRef50_B9JQ55 Peptide ABC transporter, ATP-binding protein n=1... 170 2e-40 UniRef50_Q59056 Uncharacterized ABC transporter ATP-binding prot... 167 2e-39 UniRef50_B8F5L6 ABC transporter, ATP-binding protein n=6 Tax=Pro... 167 3e-39 UniRef50_Q46EN7 Methylcoenzyme M reductase system, component A2 ... 165 9e-39 UniRef50_Q11C74 Oligopeptide/dipeptide ABC transporter, ATPase s... 162 9e-38 UniRef50_Q13ND7 ABC peptide transporter, duplicated ATPase subun... 160 2e-37 UniRef50_A1WJS3 ABC transporter related n=8 Tax=Burkholderiales ... 160 3e-37 UniRef50_A1RZ74 ABC transporter related n=1 Tax=Thermofilum pend... 157 3e-36 UniRef50_B1M6V7 ABC transporter related n=45 Tax=Bacteria RepID=... 153 2e-35 UniRef50_Q64CK8 Methyl coenzyme M reductase system component A2 ... 152 8e-35 UniRef50_A7B6V7 Putative uncharacterized protein n=1 Tax=Ruminoc... 144 1e-32 UniRef50_Q11EZ7 ABC transporter related n=16 Tax=Bacteria RepID=... 143 3e-32 UniRef50_C1YHF5 Cobalt transport protein ATP-binding subunit n=1... 139 5e-31 UniRef50_C9L762 General amino acid ABC transporter, ATP-binding ... 138 7e-31 UniRef50_A9CLQ7 ABC transporter, nucleotide binding/ATPase prote... 136 3e-30 UniRef50_Q0W8J4 Putative ABC-type cobalt import system, ATPase c... 134 2e-29 UniRef50_A2BMZ6 Oligopeptide transport ATP-binding protein n=35 ... 133 2e-29 UniRef50_A7I7V3 Cobalt ABC transporter, ATPase subunit n=4 Tax=E... 131 8e-29 UniRef50_A6VSE8 Polar amino acid ABC transporter, inner membrane... 130 2e-28 UniRef50_B7A663 ABC transporter related n=1 Tax=Thermus aquaticu... 130 2e-28 UniRef50_A6UGQ4 ABC transporter related n=7 Tax=Proteobacteria R... 126 3e-27 UniRef50_A1A2V8 Similar to glutamine ABC transporter (ATP-bindin... 126 3e-27 UniRef50_A6CYT5 ABC transporter-like protein n=1 Tax=Vibrio shil... 126 4e-27 UniRef50_A3DHQ3 ABC transporter related protein n=10 Tax=Firmicu... 126 4e-27 UniRef50_B6A1Z5 ABC transporter related n=17 Tax=Bacteria RepID=... 126 6e-27 UniRef50_O34900 L-cystine import ATP-binding protein tcyN n=96 T... 125 9e-27 UniRef50_Q12DQ3 ABC transporter related n=9 Tax=root RepID=Q12DQ... 125 1e-26 UniRef50_B1L608 ABC transporter related n=3 Tax=Archaea RepID=B1... 125 1e-26 UniRef50_B7I9F6 Glutathione import ATP-binding protein GsiA n=13... 125 1e-26 UniRef50_C8W9S4 ABC transporter related n=3 Tax=Bacteria RepID=C... 124 1e-26 >UniRef50_P0A196 UvrABC system protein A n=175 Tax=Bacteria RepID=UVRA_SALTI Length = 941 Score = 1461 bits (3782), Expect = 0.0, Method: Composition-based stats. Identities = 920/940 (97%), Positives = 936/940 (99%) Query: 1 MDKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAY 60 MDKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAY Sbjct: 1 MDKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAY 60 Query: 61 ARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRC 120 ARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRC Sbjct: 61 ARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRC 120 Query: 121 PDHDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARID 180 PDHDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARID Sbjct: 121 PDHDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARID 180 Query: 181 GEVCDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVADMDDP 240 GEVCDLSDPPKLELQKKHTIEVV+DRFKVR+DL+QRLAESFETALELSGGTAVVADMDD Sbjct: 181 GEVCDLSDPPKLELQKKHTIEVVIDRFKVRNDLSQRLAESFETALELSGGTAVVADMDDE 240 Query: 241 KAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPEL 300 KAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNP+L Sbjct: 241 KAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPDL 300 Query: 301 SLAGGAIRGWDRRNFYYFQMLKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKENIEFKY 360 SLAGGAIRGWDRRNFYYFQMLKSLA+HYKFDV+APW SLSANVHKVVLYGSGKENIEFKY Sbjct: 301 SLAGGAIRGWDRRNFYYFQMLKSLAEHYKFDVDAPWASLSANVHKVVLYGSGKENIEFKY 360 Query: 361 MNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGTRLRREARH 420 MNDRGDTS+RRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGTRL REARH Sbjct: 361 MNDRGDTSVRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGTRLNREARH 420 Query: 421 VYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTL 480 V+VENTPLPAISDMSIGHAM+FF NLKL+GQRAKIAEK+LKEIGDRLKFLVNVGLNYLTL Sbjct: 421 VFVENTPLPAISDMSIGHAMDFFTNLKLSGQRAKIAEKVLKEIGDRLKFLVNVGLNYLTL 480 Query: 481 SRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNT 540 SRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLR+LGNT Sbjct: 481 SRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRNLGNT 540 Query: 541 VIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEV 600 VIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEV Sbjct: 541 VIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEV 600 Query: 601 PKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQR 660 PK+RVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQR Sbjct: 601 PKQRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQR 660 Query: 661 QLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPE 720 QLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPE Sbjct: 661 QLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPE 720 Query: 721 SRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKY 780 SR+RGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKY Sbjct: 721 SRSRGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKY 780 Query: 781 KGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKL 840 KGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKL Sbjct: 781 KGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKL 840 Query: 841 ARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADW 900 ARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLH+LRDQGNTIVVIEHNLDVIKTADW Sbjct: 841 ARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHQLRDQGNTIVVIEHNLDVIKTADW 900 Query: 901 IVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLKPML 940 IVDLGPEGGSGGGEILV+GTPETVAECEASHTARFLKPML Sbjct: 901 IVDLGPEGGSGGGEILVAGTPETVAECEASHTARFLKPML 940 Score = 181 bits (460), Expect = 1e-43, Method: Composition-based stats. Identities = 72/196 (36%), Positives = 110/196 (56%), Gaps = 15/196 (7%) Query: 403 NRPCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKE 462 PC C+G R RE + + + + DM+I A EFF+ + Sbjct: 760 YVPCDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAVP--------------A 805 Query: 463 IGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGV-MYVLDEPSIGLHQ 521 + +L+ L++VGL Y+ L +SA TLSGGEAQR++LA ++ G +Y+LDEP+ GLH Sbjct: 806 LARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHF 865 Query: 522 RDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIM 581 D ++LL L LRD GNT++V+EH+ D I+ AD ++D+GP G GGE++ G E + Sbjct: 866 ADIQQLLDVLHQLRDQGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVAGTPETVA 925 Query: 582 AVPESLTGQYMSGKRK 597 S T +++ K Sbjct: 926 ECEASHTARFLKPMLK 941 >UniRef50_Q8ZJ07 UvrABC system protein A n=84 Tax=Bacteria RepID=UVRA_YERPE Length = 947 Score = 1418 bits (3671), Expect = 0.0, Method: Composition-based stats. Identities = 854/940 (90%), Positives = 903/940 (96%) Query: 1 MDKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAY 60 MD IEVRGARTHNLKNINL+IPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAY Sbjct: 1 MDNIEVRGARTHNLKNINLIIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAY 60 Query: 61 ARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRC 120 ARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRC Sbjct: 61 ARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRC 120 Query: 121 PDHDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARID 180 PDHDVPLAAQTVSQMVDNV+SQPEG+RLMLLAP++K+RKGEHTK LENLA+QGYIRARID Sbjct: 121 PDHDVPLAAQTVSQMVDNVISQPEGRRLMLLAPVVKDRKGEHTKILENLAAQGYIRARID 180 Query: 181 GEVCDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVADMDDP 240 GEVCDLSDPPKLELQKKHTIEVVVDRFKVR+DL QRLAESFETAL LSGGTAVVADMDDP Sbjct: 181 GEVCDLSDPPKLELQKKHTIEVVVDRFKVREDLAQRLAESFETALALSGGTAVVADMDDP 240 Query: 241 KAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPEL 300 EELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQ+FDPDRV+QNPEL Sbjct: 241 HVEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQFFDPDRVLQNPEL 300 Query: 301 SLAGGAIRGWDRRNFYYFQMLKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKENIEFKY 360 SLAGGAIRGWDRRNFYYFQML+SLA+HYKFD+EAP+ SL + V + VLYGSGK+ IEFKY Sbjct: 301 SLAGGAIRGWDRRNFYYFQMLRSLAEHYKFDIEAPFNSLDSAVQQAVLYGSGKDTIEFKY 360 Query: 361 MNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGTRLRREARH 420 +NDRGDT++RRHPFEGVLHNMERRYKETESSAVREELAKFISNR CASC GTRLRREAR+ Sbjct: 361 INDRGDTTVRRHPFEGVLHNMERRYKETESSAVREELAKFISNRSCASCSGTRLRREARY 420 Query: 421 VYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTL 480 V+VENT LP IS++SIGHA+ FF N+KL+GQRA+IAEKILKEIGDRLKFLVNVGLNYL+L Sbjct: 421 VFVENTTLPEISELSIGHALSFFQNMKLSGQRAQIAEKILKEIGDRLKFLVNVGLNYLSL 480 Query: 481 SRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNT 540 SRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLL TLIHLR+LGNT Sbjct: 481 SRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLETLIHLRNLGNT 540 Query: 541 VIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEV 600 VIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEG ++ IMA P SLTGQ++SGKR I + Sbjct: 541 VIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGTVDDIMAAPASLTGQFLSGKRSIAI 600 Query: 601 PKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQR 660 P+KRV A+P KVLKL GA GNNLKDVTLTLPVGLF+CITGVSGSGKSTLINDTL+ IAQR Sbjct: 601 PEKRVSADPSKVLKLIGATGNNLKDVTLTLPVGLFSCITGVSGSGKSTLINDTLYSIAQR 660 Query: 661 QLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPE 720 QLNGATI EPAPYR+IQGLEHFDKVIDIDQSPIGRTPRSNPATYTG+FTP+RELFAGVPE Sbjct: 661 QLNGATITEPAPYREIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGIFTPIRELFAGVPE 720 Query: 721 SRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKY 780 SR RGYTPGRFSFNV+GGRCEACQGDGVIKVEMHFLPDIYVPCD CKGKRYNRETLE+KY Sbjct: 721 SRTRGYTPGRFSFNVKGGRCEACQGDGVIKVEMHFLPDIYVPCDHCKGKRYNRETLEVKY 780 Query: 781 KGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKL 840 KGK+IHEVL MTIEEAREFFDAVPALARKLQTL+DVGL+YI LGQSATTLSGGEAQRVKL Sbjct: 781 KGKSIHEVLAMTIEEAREFFDAVPALARKLQTLIDVGLSYICLGQSATTLSGGEAQRVKL 840 Query: 841 ARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADW 900 +RELSKRGTGQTLYILDEPTTGLHFADIQQLL VLH+LRDQGNTIVVIEHNLDVIKTADW Sbjct: 841 SRELSKRGTGQTLYILDEPTTGLHFADIQQLLAVLHQLRDQGNTIVVIEHNLDVIKTADW 900 Query: 901 IVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLKPML 940 IVDLGPEGGSGGGEILVSGTPETVAEC ASHTARFLKPML Sbjct: 901 IVDLGPEGGSGGGEILVSGTPETVAECAASHTARFLKPML 940 >UniRef50_P44410 UvrABC system protein A n=133 Tax=cellular organisms RepID=UVRA_HAEIN Length = 943 Score = 1396 bits (3615), Expect = 0.0, Method: Composition-based stats. Identities = 765/940 (81%), Positives = 856/940 (91%) Query: 1 MDKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAY 60 M+ I++RGARTHNLKNINL IPR+KL+V+TGLSGSGKSSLAFDTLYAEGQRRYVESLSAY Sbjct: 1 MENIDIRGARTHNLKNINLTIPRNKLVVITGLSGSGKSSLAFDTLYAEGQRRYVESLSAY 60 Query: 61 ARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRC 120 ARQFLSLMEKPDVD IEGLSPAISIEQKSTSHNPRSTVGTITEI+DYLRLLFARVGEPRC Sbjct: 61 ARQFLSLMEKPDVDSIEGLSPAISIEQKSTSHNPRSTVGTITEIYDYLRLLFARVGEPRC 120 Query: 121 PDHDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARID 180 PDH+VPL AQT+SQMVD VLS PE ++MLLAP++K RKGEH K LEN+A+QGYIRARID Sbjct: 121 PDHNVPLTAQTISQMVDKVLSLPEDSKMMLLAPVVKNRKGEHVKILENIAAQGYIRARID 180 Query: 181 GEVCDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVADMDDP 240 GE+CDLSDPPKL LQKKHTIEVVVDRFKVR DL RLAESFETALELSGGTA+VA+MD+P Sbjct: 181 GEICDLSDPPKLALQKKHTIEVVVDRFKVRSDLATRLAESFETALELSGGTAIVAEMDNP 240 Query: 241 KAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPEL 300 KAEEL+FSANFACP CGYS+ ELEPRLFSFNNPAGACPTCDGLGVQQYFD DRV+QNP + Sbjct: 241 KAEELVFSANFACPHCGYSVPELEPRLFSFNNPAGACPTCDGLGVQQYFDEDRVVQNPTI 300 Query: 301 SLAGGAIRGWDRRNFYYFQMLKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKENIEFKY 360 SLAGGA++GWDRRNFYY+QML SLA HY FDVEAP+ SL + ++++GSGKE IEF+Y Sbjct: 301 SLAGGAVKGWDRRNFYYYQMLTSLAKHYHFDVEAPYESLPKKIQHIIMHGSGKEEIEFQY 360 Query: 361 MNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGTRLRREARH 420 MNDRGD IR+HPFEG+L+NM RRYKETES +VREELAK ISNRPC C G+RLR EAR+ Sbjct: 361 MNDRGDVVIRKHPFEGILNNMARRYKETESMSVREELAKNISNRPCIDCGGSRLRPEARN 420 Query: 421 VYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTL 480 VY+ T LP I++ SIG +EFF L L GQ+A+IAEKILKEI +RL+FLVNVGLNYL+L Sbjct: 421 VYIGRTNLPIIAEKSIGETLEFFTALSLTGQKAQIAEKILKEIRERLQFLVNVGLNYLSL 480 Query: 481 SRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNT 540 SRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLL TLIHLR+LGNT Sbjct: 481 SRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLNTLIHLRNLGNT 540 Query: 541 VIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEV 600 VIVVEHDEDAIRAADH+IDIGPGAGVHGG+V+A+G + IM P S+TG+++SG KIE+ Sbjct: 541 VIVVEHDEDAIRAADHIIDIGPGAGVHGGQVIAQGNADEIMLNPNSITGKFLSGADKIEI 600 Query: 601 PKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQR 660 PKKR + +K LKL GA GNNLK+V L +PVGLFTC+TGVSGSGKSTLINDTLFP+AQ Sbjct: 601 PKKRTALDKKKWLKLKGASGNNLKNVNLDIPVGLFTCVTGVSGSGKSTLINDTLFPLAQN 660 Query: 661 QLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPE 720 LN A + APY+ I+GLEHFDKVIDI+QSPIGRTPRSNPATYTG+FTP+RELFAGVPE Sbjct: 661 ALNRAEKTDYAPYQSIEGLEHFDKVIDINQSPIGRTPRSNPATYTGLFTPIRELFAGVPE 720 Query: 721 SRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKY 780 +RARGY PGRFSFNVRGGRCEACQGDGV+KVEMHFLPD+YVPCDQCKGKRYNRETLEI+Y Sbjct: 721 ARARGYNPGRFSFNVRGGRCEACQGDGVLKVEMHFLPDVYVPCDQCKGKRYNRETLEIRY 780 Query: 781 KGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKL 840 KGKTIH+VLDMT+EEAREFFDA+P +ARKLQTLMDVGL+YIRLGQS+TTLSGGEAQRVKL Sbjct: 781 KGKTIHQVLDMTVEEAREFFDAIPMIARKLQTLMDVGLSYIRLGQSSTTLSGGEAQRVKL 840 Query: 841 ARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADW 900 A ELSKR TG+TLYILDEPTTGLHFADI+QLL+VLH+LRDQGNTIVVIEHNLDVIKTADW Sbjct: 841 ATELSKRDTGKTLYILDEPTTGLHFADIKQLLEVLHRLRDQGNTIVVIEHNLDVIKTADW 900 Query: 901 IVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLKPML 940 IVDLGPEGGSGGG+I+ +GTPE VA+ +SHTARFLKP+L Sbjct: 901 IVDLGPEGGSGGGQIIATGTPEQVAKVTSSHTARFLKPIL 940 >UniRef50_Q88QK7 UvrABC system protein A n=91 Tax=cellular organisms RepID=UVRA_PSEPK Length = 944 Score = 1383 bits (3580), Expect = 0.0, Method: Composition-based stats. Identities = 707/940 (75%), Positives = 826/940 (87%), Gaps = 1/940 (0%) Query: 1 MDKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAY 60 MDKI +RGARTHNLKNI+L +PRDKLIV+TGLSGSGKSSLAFDTLYAEGQRRYVESLSAY Sbjct: 1 MDKILIRGARTHNLKNIDLTLPRDKLIVITGLSGSGKSSLAFDTLYAEGQRRYVESLSAY 60 Query: 61 ARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRC 120 ARQFLS+MEKPDVD IEGLSPAISIEQKSTSHNPRSTVGTITEI+DYLRLL+ARVG PRC Sbjct: 61 ARQFLSMMEKPDVDTIEGLSPAISIEQKSTSHNPRSTVGTITEIYDYLRLLYARVGTPRC 120 Query: 121 PDHDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARID 180 PDHD+PL AQT+SQMVD VL +PEG +LMLLAP+++ERKGEH + L +QG++RAR++ Sbjct: 121 PDHDIPLEAQTISQMVDLVLERPEGSKLMLLAPVVRERKGEHLAVFDELRAQGFVRARVN 180 Query: 181 GEVCDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVADMDDP 240 G++ +L + PKL+ QKKH+I+VVVDRFKVR DL QRLAESFETAL+L+ G A+VA MDD Sbjct: 181 GKLYELDELPKLDKQKKHSIDVVVDRFKVRADLQQRLAESFETALKLADGIALVAPMDDE 240 Query: 241 KAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPEL 300 + EE +FSA FACP+CG+++ ELEP+LFSFNNPAGACPTCDGLGV+Q+FD R++ N EL Sbjct: 241 QGEETIFSARFACPVCGHAISELEPKLFSFNNPAGACPTCDGLGVKQFFDTKRLV-NTEL 299 Query: 301 SLAGGAIRGWDRRNFYYFQMLKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKENIEFKY 360 +LA GAIRGWDRRN YYFQML SLA HY F +E P+G LSA KV+L GSGK++++FKY Sbjct: 300 TLAEGAIRGWDRRNVYYFQMLGSLAAHYGFSLEEPFGELSAEHQKVILQGSGKQSVDFKY 359 Query: 361 MNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGTRLRREARH 420 +NDRGD R HPFEG++ N+ERRY+ETES+ VREELAKF+ +PC C GTRLRREARH Sbjct: 360 LNDRGDIVKRSHPFEGIVPNLERRYRETESATVREELAKFLGTQPCPDCRGTRLRREARH 419 Query: 421 VYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTL 480 V+V LPA++++ IG A +F L L G+R +IA KILKEI +RL+FLVNVGL+YLTL Sbjct: 420 VWVGEKTLPAVTNLPIGEASNYFGQLTLTGRRGEIAAKILKEICERLQFLVNVGLDYLTL 479 Query: 481 SRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNT 540 RSA+TLSGGEAQRIRLASQIGAGLVGVMY+LDEPSIGLHQRDN+RLL TL HLRDLGNT Sbjct: 480 DRSADTLSGGEAQRIRLASQIGAGLVGVMYILDEPSIGLHQRDNDRLLATLNHLRDLGNT 539 Query: 541 VIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEV 600 VIVVEHDEDAIR AD+V+DIGPGAGVHGG++VAEG + +M P+SLTG+Y+SG++KI V Sbjct: 540 VIVVEHDEDAIRLADYVVDIGPGAGVHGGQIVAEGSPQEVMDHPDSLTGKYLSGRKKIVV 599 Query: 601 PKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQR 660 P KR P N + LKL GARGNNL++V L +P+GL TC+TGVSGSGKSTLIN+TL+P+A Sbjct: 600 PAKRTPRNKKLQLKLKGARGNNLQNVDLEVPIGLLTCVTGVSGSGKSTLINNTLYPLAAT 659 Query: 661 QLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPE 720 LNGA+ E AP+ + GL+H DKV+DIDQSPIGRTPRSNPATYTG+FTP+RELF+GVPE Sbjct: 660 ALNGASSLEAAPHSSMDGLQHLDKVVDIDQSPIGRTPRSNPATYTGIFTPIRELFSGVPE 719 Query: 721 SRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKY 780 SR+RGY PGRFSFNV+GGRCEACQGDG+IKVEMHFLPDIYVPCD CK KRYNRETLEIKY Sbjct: 720 SRSRGYGPGRFSFNVKGGRCEACQGDGLIKVEMHFLPDIYVPCDVCKSKRYNRETLEIKY 779 Query: 781 KGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKL 840 KGK IHEVL+MTIE+AREFFDAVPALARKLQTLMDVGL+YI+LGQSATTLSGGEAQRVKL Sbjct: 780 KGKNIHEVLEMTIEDAREFFDAVPALARKLQTLMDVGLSYIKLGQSATTLSGGEAQRVKL 839 Query: 841 ARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADW 900 +RELSKR TG+TLYILDEPTTGLHFADIQQLLDVLH+LRD GNT+VVIEHNLDVIKTADW Sbjct: 840 SRELSKRDTGKTLYILDEPTTGLHFADIQQLLDVLHRLRDHGNTVVVIEHNLDVIKTADW 899 Query: 901 IVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLKPML 940 +VDLGPEGGS GG+I+ GTPE ++E + S+T +LKP+L Sbjct: 900 LVDLGPEGGSKGGQIIACGTPEELSEMKQSYTGHYLKPLL 939 >UniRef50_Q87BK9 UvrABC system protein A n=247 Tax=cellular organisms RepID=UVRA_XYLFT Length = 965 Score = 1335 bits (3455), Expect = 0.0, Method: Composition-based stats. Identities = 661/937 (70%), Positives = 791/937 (84%), Gaps = 1/937 (0%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 63 I +RGARTHNLKN++L +PR+ LIV+TGLSGSGKSSLAFDT+YAEGQRRYVESLSAYARQ Sbjct: 5 IRIRGARTHNLKNLDLDLPRNTLIVITGLSGSGKSSLAFDTIYAEGQRRYVESLSAYARQ 64 Query: 64 FLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCPDH 123 FLS+MEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEI+DYLRLL+ARVG+PRCP+H Sbjct: 65 FLSVMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIYDYLRLLYARVGQPRCPEH 124 Query: 124 DVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARIDGEV 183 PL AQTVSQMVD+VL+ +R MLLAP+++ERKGEHT+ E L +QG++R R+DGE+ Sbjct: 125 HYPLEAQTVSQMVDHVLTLDPEQRYMLLAPVVRERKGEHTQVFEQLRAQGFVRVRVDGEL 184 Query: 184 CDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVADMDDPKAE 243 ++ P L L++KHTIE V+DRF+ R+D+ QRLAESFETAL+L G A V +D A Sbjct: 185 YEIDAVPTLTLRQKHTIEAVIDRFRPREDIKQRLAESFETALKLGNGMASVQTLDTTTAT 244 Query: 244 ELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPELSLA 303 LFS+ ++CP+C YS+ ELEPRLFSFN P GACP C+GLGV ++FDP +V+ +P+LSL+ Sbjct: 245 PHLFSSKYSCPVCDYSLPELEPRLFSFNAPMGACPACNGLGVTEFFDPAKVVIHPDLSLS 304 Query: 304 GGAIRGWDRRNFYYFQMLKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKENIEFKYMND 363 GA+RGWDRRN YYFQ++ SLA HY FD++A W SL + +L+GSG E I F Y+ + Sbjct: 305 AGAVRGWDRRNAYYFQLIASLAKHYTFDIDASWESLPEEIRHTILFGSGDEQINFTYLTE 364 Query: 364 RGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGTRLRREARHVYV 423 G + R+H FEG++ N+ERRY+ETES+AVREELAK++S R C C GTRL R AR+V+V Sbjct: 365 AGGRTKRKHRFEGIVPNLERRYRETESAAVREELAKYVSTRTCPECGGTRLNRAARNVFV 424 Query: 424 ENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTLSRS 483 + LP ++ + I A+EFF L+L+G R +IA KI+KEIG+RL FLV+VGL+YLTL R Sbjct: 425 ADRTLPELTVLPINDALEFFKTLRLSGWRGEIAIKIVKEIGERLGFLVDVGLDYLTLERK 484 Query: 484 AETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIV 543 A+TLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTL LRDLGNTVIV Sbjct: 485 ADTLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLTRLRDLGNTVIV 544 Query: 544 VEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEVPKK 603 VEHDEDAIR ADH++DIGPGAGVHGGE+ A+G LE IMA P SLTGQY+SG+R+IE+PK+ Sbjct: 545 VEHDEDAIRQADHILDIGPGAGVHGGEICAQGSLEQIMAAPRSLTGQYLSGRRRIEIPKQ 604 Query: 604 RVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLN 663 R P N K+L L GA GNNLK V L +P GLFTCITGVSGSGKSTLINDTLF +A ++N Sbjct: 605 RHPPNATKMLHLRGACGNNLKGVNLDIPEGLFTCITGVSGSGKSTLINDTLFTLAANEIN 664 Query: 664 GATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESRA 723 GA+ APY + GLE FDKV+DIDQSPIGRTPRSNPATYTG+FTP+RELFA VPE+RA Sbjct: 665 GASHP-IAPYASVDGLELFDKVVDIDQSPIGRTPRSNPATYTGMFTPLRELFAQVPEARA 723 Query: 724 RGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKYKGK 783 RGY+PGRFSFNVRGGRCEAC+GDG+IKVEMHFLPD+YVPCD C GKRYNRETLEI+YKG Sbjct: 724 RGYSPGRFSFNVRGGRCEACEGDGLIKVEMHFLPDVYVPCDICHGKRYNRETLEIRYKGY 783 Query: 784 TIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARE 843 I++VL+MT+E+A + F+AVPA+ARKL+TL+DVGL+Y++LGQSATTLSGGEAQRVKL++E Sbjct: 784 NINDVLEMTVEDALKLFEAVPAIARKLETLVDVGLSYLKLGQSATTLSGGEAQRVKLSKE 843 Query: 844 LSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADWIVD 903 LS+R TG TLYILDEPTTGLHF DI+ LL V+HKLRD GNT++VIEHNLDVIKTADW++D Sbjct: 844 LSRRDTGHTLYILDEPTTGLHFYDIEALLAVMHKLRDAGNTVIVIEHNLDVIKTADWVID 903 Query: 904 LGPEGGSGGGEILVSGTPETVAECEASHTARFLKPML 940 LGPEGG GGEILV+GTPETVA SHT FL +L Sbjct: 904 LGPEGGGRGGEILVAGTPETVAAHPHSHTGHFLAKLL 940 Score = 100 bits (248), Expect = 4e-19, Method: Composition-based stats. Identities = 38/119 (31%), Positives = 60/119 (50%), Gaps = 6/119 (5%) Query: 610 EKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAE 669 ++++ GAR +NLK++ L LP ITG+SGSGKS+L DT++ QR+ + A Sbjct: 2 TALIRIRGARTHNLKNLDLDLPRNTLIVITGLSGSGKSSLAFDTIYAEGQRRYVESLSAY 61 Query: 670 PAPYRDIQGLEHFDKV------IDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESR 722 + + D + I I+Q PRS T T ++ +R L+A V + R Sbjct: 62 ARQFLSVMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIYDYLRLLYARVGQPR 120 >UniRef50_C9KNX7 Excinuclease ABC subunit A n=2 Tax=Bacteria RepID=C9KNX7_9FIRM Length = 944 Score = 1324 bits (3426), Expect = 0.0, Method: Composition-based stats. Identities = 558/942 (59%), Positives = 702/942 (74%), Gaps = 8/942 (0%) Query: 2 DKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYA 61 I ++GAR HNLKNI++ IPRDKL+V+TGLSGSGKSSLAFDT+YAEGQRRYVESLS+YA Sbjct: 3 KYIRIKGARAHNLKNIDVNIPRDKLVVITGLSGSGKSSLAFDTIYAEGQRRYVESLSSYA 62 Query: 62 RQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCP 121 RQFL M+KPDVD I+GLSPAISI+QK+TSHNPRSTVGT+TEI+DYLRLLFAR G P CP Sbjct: 63 RQFLGQMDKPDVDQIDGLSPAISIDQKTTSHNPRSTVGTVTEIYDYLRLLFARAGHPHCP 122 Query: 122 DHDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARIDG 181 P+ Q+V QM+D + PE +L+++A +++ +KGEH K L ++ +GY+R RIDG Sbjct: 123 KCGKPITQQSVDQMIDQIRELPERTKLLVMAQVVRGKKGEHKKVLAHIRHEGYVRVRIDG 182 Query: 182 EVCDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVADMDDPK 241 EV D+ + +LE KKHTIEVV+DR VR+ + RLA+S ETAL+L G A V +D Sbjct: 183 EVMDIGEDIQLEKNKKHTIEVVIDRLVVREGMESRLADSLETALKLGEGVAYVQIVD--- 239 Query: 242 AEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPELS 301 E L+FS NFAC CG S+ E+ PR+FSFNNP GACP C GLG FD + V+ +P LS Sbjct: 240 GELLMFSENFACVDCGISLPEITPRMFSFNNPYGACPVCMGLGSHMEFDEELVLPDPTLS 299 Query: 302 LAGGAIRGWDRR-NFYYFQMLKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKENIEFKY 360 + GG + + Y ++K++ + + +E PW + +V+LYGSG+E F+Y Sbjct: 300 VGGGVFAPLSKNLHSYAMCVMKAILEKRGYSLETPWQEIDKKTQQVLLYGSGEERFTFRY 359 Query: 361 MNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGTRLRREARH 420 N G+ PFEGV+ + RRY ET+S +RE +++ PC +C G RL+ E Sbjct: 360 TNMFGEDKEYFVPFEGVMPLLARRYHETDSDEMRESYENYMTEIPCKACHGARLKPETLA 419 Query: 421 VYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTL 480 V V + ++ M+I A FF +L L + KIA +ILKEI RL FL++VGL+YLTL Sbjct: 420 VTVGGKNIDEVTRMTIREADAFFTHLTLTPREMKIAAQILKEIHARLHFLLDVGLDYLTL 479 Query: 481 SRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNT 540 SRSA TLSGGEAQRIRLA+QIG+GL GV+YVLDEPSIGLHQRDN RLL TL HLRDLGNT Sbjct: 480 SRSAGTLSGGEAQRIRLATQIGSGLQGVLYVLDEPSIGLHQRDNNRLLATLKHLRDLGNT 539 Query: 541 VIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEV 600 +IVVEHDED + AADH+IDIGPGAG +GG VVAEG E I P+S+TG Y+S ++ I V Sbjct: 540 LIVVEHDEDTMYAADHIIDIGPGAGANGGRVVAEGTAEEIKKNPDSITGAYLSRRKFIPV 599 Query: 601 PKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQR 660 P KR P N K +++ GA NNLKD+T+ P+G T +TGVSGSGKSTL+N+ L+ Sbjct: 600 PAKRRPGNG-KFIEVVGAAENNLKDLTVKFPLGTLTLVTGVSGSGKSTLVNEILYKGIAS 658 Query: 661 QLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPE 720 +L A +P ++ I+GLE+ DK+IDIDQ PIGRTPRSNPATYTGVF +RELF+ E Sbjct: 659 RLYHAK-GKPGKHKKIKGLENIDKIIDIDQQPIGRTPRSNPATYTGVFDAIRELFSQTSE 717 Query: 721 SRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKY 780 +R RGY GRFSFNV+GGRCEAC+GDG++K+EMHFLPD+YVPC+ CKG RYNRETLE++Y Sbjct: 718 ARMRGYKAGRFSFNVKGGRCEACKGDGILKIEMHFLPDVYVPCEVCKGARYNRETLEVRY 777 Query: 781 KGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKL 840 KGK I EVLDMTI+EA EFF VP +ARKLQ + DVGL YI+LGQ ATTLSGGEAQRVKL Sbjct: 778 KGKNISEVLDMTIDEAVEFFANVPRIARKLQIIQDVGLGYIKLGQPATTLSGGEAQRVKL 837 Query: 841 ARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADW 900 A ELS+R TG+TLYILDEPTTGLH ADI +LLD+L +L G+T+VVIEHNLDVIKTAD+ Sbjct: 838 ATELSRRSTGKTLYILDEPTTGLHTADIHKLLDILQRLVAGGDTVVVIEHNLDVIKTADY 897 Query: 901 IVDLGPEGGSGGGEILVSGTPET--VAECEASHTARFLKPML 940 I+DLGPEGG GG ++ +G PE + + AS+T +FL+P+L Sbjct: 898 IIDLGPEGGDKGGTVVATGRPEDIVIVKVPASYTGKFLRPLL 939 Score = 103 bits (256), Expect = 4e-20, Method: Composition-based stats. Identities = 37/118 (31%), Positives = 59/118 (50%), Gaps = 6/118 (5%) Query: 610 EKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAE 669 EK +++ GAR +NLK++ + +P ITG+SGSGKS+L DT++ QR+ + + Sbjct: 2 EKYIRIKGARAHNLKNIDVNIPRDKLVVITGLSGSGKSSLAFDTIYAEGQRRYVESLSSY 61 Query: 670 PAPYR------DIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPES 721 + D+ ++ I IDQ PRS T T ++ +R LFA Sbjct: 62 ARQFLGQMDKPDVDQIDGLSPAISIDQKTTSHNPRSTVGTVTEIYDYLRLLFARAGHP 119 >UniRef50_Q5HHQ9 UvrABC system protein A n=172 Tax=cellular organisms RepID=UVRA_STAAC Length = 948 Score = 1318 bits (3410), Expect = 0.0, Method: Composition-based stats. Identities = 546/939 (58%), Positives = 722/939 (76%), Gaps = 6/939 (0%) Query: 3 KIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYAR 62 I V+GAR HNLK+I++ +P++KLIV+TGLSGSGKSSLAFDT+YAEGQRRYVESLSAYAR Sbjct: 5 SIVVKGARAHNLKDIDIELPKNKLIVMTGLSGSGKSSLAFDTIYAEGQRRYVESLSAYAR 64 Query: 63 QFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCPD 122 QFL M+KPDVD IEGLSPAISI+QK+TS NPRSTV T+TEI+DY+RLL+ARVG+P CP+ Sbjct: 65 QFLGQMDKPDVDTIEGLSPAISIDQKTTSKNPRSTVATVTEIYDYIRLLYARVGKPYCPN 124 Query: 123 HDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARIDGE 182 H++ + +QTV QMVD ++ ++ LLAP+I RKG H K +E++ +GY+R RIDGE Sbjct: 125 HNIEIESQTVQQMVDRIMELEARTKIQLLAPVIAHRKGSHEKLIEDIGKKGYVRLRIDGE 184 Query: 183 VCDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVADMDDPKA 242 + D++D P L+ K HTIEVVVDR V+D + RLA+S ETALELS G V +D Sbjct: 185 IVDVNDVPTLDKNKNHTIEVVVDRLVVKDGIETRLADSIETALELSEGQLTVDVID---G 241 Query: 243 EELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPELSL 302 E+L FS + ACPICG+S+ ELEPR+FSFN+P GACPTCDGLG + D D V+ + + +L Sbjct: 242 EDLKFSESHACPICGFSIGELEPRMFSFNSPFGACPTCDGLGQKLTVDVDLVVPDKDKTL 301 Query: 303 AGGAIRGW-DRRNFYYFQMLKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKENIEFKYM 361 GAI W + +Y +LK + + YK +++ P+ L+ ++LYGSG + IEF + Sbjct: 302 NEGAIEPWIPTSSDFYPTLLKRVCEVYKINMDKPFKKLTERQRDILLYGSGDKEIEFTFT 361 Query: 362 NDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGTRLRREARHV 421 +G T R FEGV+ N+ RR+ E+ S RE ++K+++ PC +C G RL REA V Sbjct: 362 QRQGGTRKRTMVFEGVVPNISRRFHESPSEYTREMMSKYMTELPCETCHGKRLSREALSV 421 Query: 422 YVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTLS 481 YV + + + SI A+ ++ N+ L+ Q IA +ILKEI RL FL NVGL YLTL+ Sbjct: 422 YVGGLNIGEVVEYSISQALNYYKNIDLSEQDQAIANQILKEIISRLTFLNNVGLEYLTLN 481 Query: 482 RSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTV 541 R++ TLSGGEAQRIRLA+QIG+ L GV+YVLDEPSIGLHQRDN+RL+ TL +RDLGNT+ Sbjct: 482 RASGTLSGGEAQRIRLATQIGSRLTGVLYVLDEPSIGLHQRDNDRLINTLKEMRDLGNTL 541 Query: 542 IVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEVP 601 IVVEHD+D +RAAD+++DIGPGAG HGG++V+ G + +M +SLTGQY+SGK++IEVP Sbjct: 542 IVVEHDDDTMRAADYLVDIGPGAGEHGGQIVSSGTPQKVMKDKKSLTGQYLSGKKRIEVP 601 Query: 602 KKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQ 661 + R PA+ K + + GAR NNLK V + +P+ + T +TGVSGSGKS+L+N+ L+ ++ Sbjct: 602 EYRRPASDRK-ISIRGARSNNLKGVDVDIPLSIMTVVTGVSGSGKSSLVNEVLYKSLAQK 660 Query: 662 LNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPES 721 +N + + +P Y I+G++ DK+IDIDQSPIGRTPRSNPATYTGVF +R++FA E+ Sbjct: 661 INKSKV-KPGLYDKIEGIDQLDKIIDIDQSPIGRTPRSNPATYTGVFDDIRDVFAQTNEA 719 Query: 722 RARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKYK 781 + RGY GRFSFNV+GGRCEAC+GDG+IK+EMHFLPD+YVPC+ C GKRYNRETLE+ YK Sbjct: 720 KIRGYQKGRFSFNVKGGRCEACKGDGIIKIEMHFLPDVYVPCEVCDGKRYNRETLEVTYK 779 Query: 782 GKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLA 841 GK I ++L+MT+EEA +FF+ +P + RKLQTL+DVGL Y+ LGQ ATTLSGGEAQRVKLA Sbjct: 780 GKNIADILEMTVEEATQFFENIPKIKRKLQTLVDVGLGYVTLGQQATTLSGGEAQRVKLA 839 Query: 842 RELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADWI 901 EL KR TG+++YILDEPTTGLH DI +LL VL++L + G+T+V+IEHNLDVIKTAD+I Sbjct: 840 SELHKRSTGKSIYILDEPTTGLHVDDISRLLKVLNRLVENGDTVVIIEHNLDVIKTADYI 899 Query: 902 VDLGPEGGSGGGEILVSGTPETVAECEASHTARFLKPML 940 +DLGPEGGSGGG I+ +GTPE +A+ ++S+T ++LK +L Sbjct: 900 IDLGPEGGSGGGTIVATGTPEDIAQTKSSYTGKYLKEVL 938 Score = 105 bits (263), Expect = 7e-21, Method: Composition-based stats. Identities = 42/128 (32%), Positives = 63/128 (49%), Gaps = 10/128 (7%) Query: 609 PEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIA 668 E + + GAR +NLKD+ + LP +TG+SGSGKS+L DT++ QR+ + A Sbjct: 2 KEPSIVVKGARAHNLKDIDIELPKNKLIVMTGLSGSGKSSLAFDTIYAEGQRRYVESLSA 61 Query: 669 EPAPYR------DIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESR 722 + D+ +E I IDQ + PRS AT T ++ +R L+A V Sbjct: 62 YARQFLGQMDKPDVDTIEGLSPAISIDQKTTSKNPRSTVATVTEIYDYIRLLYARVG--- 118 Query: 723 ARGYTPGR 730 + Y P Sbjct: 119 -KPYCPNH 125 >UniRef50_Q8ENJ6 UvrABC system protein A n=258 Tax=cellular organisms RepID=UVRA_OCEIH Length = 958 Score = 1317 bits (3408), Expect = 0.0, Method: Composition-based stats. Identities = 553/941 (58%), Positives = 719/941 (76%), Gaps = 7/941 (0%) Query: 2 DKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYA 61 I+++GARTHNLK+I++ IP++KL+V+TGLSGSGKSSLAFDT+YAEGQRRYVESLS+YA Sbjct: 4 KSIKIQGARTHNLKDIDIDIPKNKLVVLTGLSGSGKSSLAFDTIYAEGQRRYVESLSSYA 63 Query: 62 RQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCP 121 RQFL M+KPDVD IEGLSPAISI+QK+TS NPRSTVGT+TEI+DYLRLL+ARVG P CP Sbjct: 64 RQFLGQMDKPDVDVIEGLSPAISIDQKTTSKNPRSTVGTVTEIYDYLRLLYARVGRPTCP 123 Query: 122 DHDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARIDG 181 +H + +++QTV QMVD +L PE +L +LAP++ RKGEH K LENL +GY+R R+D Sbjct: 124 NHGIEISSQTVQQMVDRILEYPERTKLQILAPVVSGRKGEHVKILENLKQEGYVRIRVDN 183 Query: 182 EVCDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVADMDDPK 241 E+ +++D +LE KKH+IEVV+DR V+D + RL++S ETAL+L G +V + + Sbjct: 184 EMREVTDDIQLEKNKKHSIEVVIDRIVVKDGVASRLSDSIETALKLGEGNIIVDVIGE-- 241 Query: 242 AEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPELS 301 EEL FS N ACPICG+S+ ELEPRLFSFN+P GACP+CDGLG + D D VI + E + Sbjct: 242 -EELTFSENHACPICGFSIGELEPRLFSFNSPFGACPSCDGLGTKLEVDIDLVIPDWEKT 300 Query: 302 LAGGAIRGWDR-RNFYYFQMLKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKENIEFKY 360 L AI W+ + YY Q+LKS+ +H+ D++ P + ++L GSGKE I+F+Y Sbjct: 301 LNENAIAPWEPISSQYYPQLLKSVCNHFGIDMDIPVKEIPQQQMDIILQGSGKEKIKFEY 360 Query: 361 MNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGTRLRREARH 420 ND G PFEGVL N+ RRY+ET S +RE L K+++ + C +C+G RL++EA Sbjct: 361 ENDFGSIRRSEAPFEGVLKNVARRYRETSSDFIRETLEKYMAQKNCPTCKGHRLKKEALA 420 Query: 421 VYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTL 480 V + + ++D SI +++ F L L + +IA ILKEI +RL+FL NVGL+YLTL Sbjct: 421 VLINGKHISNVTDYSIVESIQLFQQLDLTEKEQQIARLILKEIDNRLEFLNNVGLDYLTL 480 Query: 481 SRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNT 540 SR+A TLSGGEAQRIRLA+QIG+ L GV+YVLDEPSIGLHQRDN+RL+ TL +RDL NT Sbjct: 481 SRTAGTLSGGEAQRIRLATQIGSALTGVLYVLDEPSIGLHQRDNDRLIDTLKRMRDLDNT 540 Query: 541 VIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEV 600 +IVVEHDED + AAD ++DIGPGAG HGGE+VA + +M +SLTG+Y+SGK I + Sbjct: 541 LIVVEHDEDTMLAADWLVDIGPGAGEHGGEIVASDTPQNVMKNEQSLTGKYLSGKEFIPL 600 Query: 601 PKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQR 660 P KR N K +++ GA NNLK+V+ +P+GL T +TGVSGSGKSTL+N+ ++ + Sbjct: 601 PTKRRKPNKRK-IEVMGASENNLKNVSAKIPIGLMTVVTGVSGSGKSTLVNEIVYKSLAK 659 Query: 661 QLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPE 720 L + +P ++ I+G+EH DKVIDIDQSPIGRTPRSNPATYTGVF +R++FA E Sbjct: 660 SLYKGKV-KPGKHKKIKGIEHIDKVIDIDQSPIGRTPRSNPATYTGVFDDIRDVFAQTNE 718 Query: 721 SRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKY 780 ++ RGY GRFSFNV+GGRCEAC+GDG++K+EMHFLPD+YVPC+ C G RYNRETLE+KY Sbjct: 719 AKVRGYKKGRFSFNVKGGRCEACRGDGILKIEMHFLPDVYVPCEVCHGARYNRETLEVKY 778 Query: 781 KGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKL 840 KGK I EVL++ IEEA EFF A+P + RKLQT+ DVGL YIRLGQ ATTLSGGEAQRVKL Sbjct: 779 KGKNISEVLELRIEEALEFFSAIPKIKRKLQTVYDVGLGYIRLGQPATTLSGGEAQRVKL 838 Query: 841 ARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADW 900 A EL KR TG++ YILDEPTTGLH DI++LL VL ++ D G+++++IEHNLDVIK+AD Sbjct: 839 ASELHKRSTGKSFYILDEPTTGLHVDDIRRLLSVLQRIADNGDSVLIIEHNLDVIKSADH 898 Query: 901 IVDLGPEGGSGGGEILVSGTPETVAECEA-SHTARFLKPML 940 I+DLGPEGG GG+I+ +GTPE +AE + S+T ++L P+L Sbjct: 899 IIDLGPEGGDRGGQIIATGTPEQIAEQQDVSYTGKYLSPVL 939 >UniRef50_A5WGZ4 Excinuclease ABC subunit A n=24 Tax=Bacteria RepID=A5WGZ4_PSYWF Length = 992 Score = 1313 bits (3397), Expect = 0.0, Method: Composition-based stats. Identities = 629/985 (63%), Positives = 765/985 (77%), Gaps = 46/985 (4%) Query: 2 DKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYA 61 + I++RGARTHNLKNI++ IPRDK +V+TGLSGSGKSSLAFDTLYAEGQRRYVESLSAYA Sbjct: 4 EHIKIRGARTHNLKNIDIDIPRDKFVVITGLSGSGKSSLAFDTLYAEGQRRYVESLSAYA 63 Query: 62 RQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCP 121 RQFLS M+KP+VD IEGLSPAI+IEQKST+HNPRSTVGTITEI+DYLRLL+ARVG P CP Sbjct: 64 RQFLSQMDKPEVDSIEGLSPAIAIEQKSTNHNPRSTVGTITEIYDYLRLLYARVGTPFCP 123 Query: 122 DHDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARIDG 181 H++P+ AQT+++MVD++++ PE +LM+LAP+I++RKGEH LE L QG++R R+DG Sbjct: 124 VHNLPMVAQTITEMVDDIMALPEDTKLMILAPVIRDRKGEHVVLLEQLVGQGFVRVRVDG 183 Query: 182 EVCDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVADMDDP- 240 V D+ + P LE KKHTIEVVVDRFKVR+DL R+AES ETAL L A++ MD Sbjct: 184 HVYDMDELPALEKNKKHTIEVVVDRFKVREDLGNRVAESLETALRLGSDLAILNYMDGNP 243 Query: 241 -------KAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDR 293 +++ + SA +CPIC ++ ELEPRLFSFNNP GACP CDGLG +QYF ++ Sbjct: 244 NPDASNQDSDDQILSAKHSCPICDRAVSELEPRLFSFNNPYGACPACDGLGKRQYFSAEK 303 Query: 294 VIQNPELSLAGGAIRGWDRRNFYYFQMLKSLADHYKFDVEAPWGSLSANVHKVVLYGSGK 353 +I NPE SL GA+ GWD+R+ YYF +L ++A HY D++ PW + ++L GSGK Sbjct: 304 LITNPEKSLNQGAVNGWDKRHAYYFGLLNTVAKHYNIDMDIPWQEIDKEHRDIILNGSGK 363 Query: 354 ENIEFKYMNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGTR 413 E IEF + ++RG + + PFEGVL +ERRY +T+S+ VR+ELAK++++ C C+G R Sbjct: 364 EKIEFNFTDERGRKTKKTTPFEGVLPYLERRYAKTQSNFVRDELAKYLADTTCNVCDGAR 423 Query: 414 LRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNV 473 L AR+V V+ + I MSIG A +++ +L+++G + +I+EKI KEI +RL FLV+V Sbjct: 424 LNEIARNVRVDGQGIADIVQMSIGDAADYYKDLQMSGSKGEISEKIFKEINERLNFLVSV 483 Query: 474 GLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIH 533 GL+YL L+RSAETLSGGEAQRIRLASQIGAGL+GVMYVLDEPSIGLHQRDN+RLL TL Sbjct: 484 GLDYLNLARSAETLSGGEAQRIRLASQIGAGLMGVMYVLDEPSIGLHQRDNDRLLQTLTR 543 Query: 534 LRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMS 593 LRDLGNTV+VVEHDEDAIR ADHVIDIG GAGVHGG V+A+G ++ IM V ESLTGQY+S Sbjct: 544 LRDLGNTVLVVEHDEDAIRQADHVIDIGVGAGVHGGHVIAQGTMQEIMDVEESLTGQYLS 603 Query: 594 GKRKIEVPKKRVPAN-------PEKV-------------------------------LKL 615 GK++I +PK R A PEK ++L Sbjct: 604 GKKEIAIPKVRHKAKTIDLNNPPEKARIMPMGKAKAAAAAKEAKNKKPKAKNIVPMQIEL 663 Query: 616 TGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAEPAPYRD 675 GA GNNL+DV LT+P+G FTC+TGVSGSGKSTLIN TL P+A QLN A+ P Y Sbjct: 664 KGANGNNLQDVDLTIPIGTFTCVTGVSGSGKSTLINRTLMPLAATQLNNASTLIPDKYDS 723 Query: 676 IQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESRARGYTPGRFSFNV 735 I GLE+ DK++DIDQSPIGRTPRSNPATYTGVFTP+R+LF+ E++ARGY GRFSFNV Sbjct: 724 ITGLEYLDKMVDIDQSPIGRTPRSNPATYTGVFTPIRDLFSQTQEAKARGYKAGRFSFNV 783 Query: 736 RGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEE 795 +GGRCE CQGDG+IKVEMHFLPD+YVPCD C GKRYNRETLEI YKGK+I EVLDMT+E+ Sbjct: 784 KGGRCETCQGDGLIKVEMHFLPDMYVPCDICHGKRYNRETLEIHYKGKSIAEVLDMTVED 843 Query: 796 AREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYI 855 A EFF A+P + R+LQ LMDVGL+YIRLGQSA TLSGGEAQRVKLAREL+KR TGQTLYI Sbjct: 844 ATEFFSAIPPIHRRLQALMDVGLSYIRLGQSAPTLSGGEAQRVKLARELAKRDTGQTLYI 903 Query: 856 LDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEI 915 LDEPTTGLHF DI +LL++LH LRD+GNTIVVIEHNLDVIKTADWIVDLGPEGG GG I Sbjct: 904 LDEPTTGLHFHDIYKLLNILHTLRDKGNTIVVIEHNLDVIKTADWIVDLGPEGGKNGGMI 963 Query: 916 LVSGTPETVAECEASHTARFLKPML 940 + GTPE VA + S T +FLKPML Sbjct: 964 IAEGTPEEVANTKESFTGQFLKPML 988 >UniRef50_D2RIL7 Excinuclease ABC, A subunit n=3 Tax=Bacteria RepID=D2RIL7_ACIFE Length = 939 Score = 1305 bits (3378), Expect = 0.0, Method: Composition-based stats. Identities = 531/940 (56%), Positives = 681/940 (72%), Gaps = 6/940 (0%) Query: 2 DKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYA 61 D I ++GAR HNLKNI+L IPR+KL+V+TGLSGSGKSSLAFDT+YAEGQRRYVESLSAYA Sbjct: 4 DVIVIQGARQHNLKNISLNIPRNKLVVITGLSGSGKSSLAFDTIYAEGQRRYVESLSAYA 63 Query: 62 RQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCP 121 RQFL M+KPDVD+I GLSPAISI+QK+TS NPRSTVGT+TEI+DYLRLLFAR+G P CP Sbjct: 64 RQFLGQMDKPDVDYIGGLSPAISIDQKTTSRNPRSTVGTVTEIYDYLRLLFARIGIPHCP 123 Query: 122 DHDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARIDG 181 + Q+ Q+ D VL PEG + M+LAP+++ RKGEH LE + GY+R ++D Sbjct: 124 QCGKVIERQSPQQIADKVLELPEGTKFMILAPVVRGRKGEHKNILETVRRAGYVRVKVDD 183 Query: 182 EVCDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVADMDDPK 241 + L + +L+ +KKH+I VVVDR R L RL +S ETAL+L GT + ++ Sbjct: 184 HLYTLDEEIQLDKKKKHSISVVVDRLVARPGLGSRLTDSLETALKLGEGTVAIEEI---G 240 Query: 242 AEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPELS 301 E ++S FAC CG S+ E+EPRLFSFN P GACP C GLG FDPD +I + Sbjct: 241 GETHVYSEKFACAECGISLPEIEPRLFSFNAPYGACPDCMGLGQHMEFDPDLIIPDKTRP 300 Query: 302 LAGGAIRGWDRR-NFYYFQMLKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKENIEFKY 360 GAI Y+ L ++ + ++ W L + +L G E F Y Sbjct: 301 FDQGAIAAVSSNVKSYFLCQLAAVLKSRGYSLQNCWKDLPRKFQQQLLEGIPDEIFTFSY 360 Query: 361 MNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGTRLRREARH 420 N G+ + PFEG++ ++RR KE S + R + F++ C++C G RLR E Sbjct: 361 QNLMGEINEHNTPFEGIIPVLKRRLKEAMSESQRLDYESFMTAIECSTCHGARLRPEVLG 420 Query: 421 VYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTL 480 + V+ + + M + + FFN L+L+ + A IA++ILKEI RL FL NVGL+YLTL Sbjct: 421 ITVDGKNIQQVCRMPVRECLAFFNGLQLSDRDAFIAKQILKEIRARLSFLNNVGLDYLTL 480 Query: 481 SRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNT 540 R+A TLSGGEAQRIRLA+QIG+GLVGV+Y+LDEPSIGLHQRDN++LL TL +LRD+GNT Sbjct: 481 DRAAATLSGGEAQRIRLATQIGSGLVGVLYILDEPSIGLHQRDNDKLLETLKNLRDMGNT 540 Query: 541 VIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEV 600 +IVVEHDED +RAAD +IDIGPGAG +GG VVA+G + I VPES+TGQY+SG++KI V Sbjct: 541 LIVVEHDEDTMRAADQIIDIGPGAGENGGYVVAQGTADEISQVPESITGQYLSGRKKIPV 600 Query: 601 PKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQR 660 P++R N K L + GAR NNLKD+ +++P+G T +TGVSGSGKSTLIND L+ + Sbjct: 601 PQERRKGNG-KQLTIKGARANNLKDIDVSIPLGTLTVVTGVSGSGKSTLINDILYKALAK 659 Query: 661 QLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPE 720 +L GA P + I G++H DKVI+IDQSPIGRTPRSNPATYTG F +R LF+ + Sbjct: 660 KLMGAR-ERPLAHDRINGIQHIDKVINIDQSPIGRTPRSNPATYTGTFDLIRTLFSTTND 718 Query: 721 SRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKY 780 ++ RGY PGRFSFNV+GGRCEAC GDG++K+EM+FLPD+YVPC+ CKG RYNR+TLE++Y Sbjct: 719 AKLRGYKPGRFSFNVKGGRCEACHGDGMLKIEMNFLPDVYVPCEVCKGTRYNRDTLEVRY 778 Query: 781 KGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKL 840 KGK I EVLDMT+ EA ++F + RKLQ L DVGL YIRLGQ+ATTLSGGEAQRVKL Sbjct: 779 KGKNIAEVLDMTVSEACQYFSNQQRILRKLQVLEDVGLGYIRLGQAATTLSGGEAQRVKL 838 Query: 841 ARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADW 900 A EL+K TG+TLYILDEPTTGLH AD+ +LL+VL +L D G+T+VVIEHNLDVIK+ADW Sbjct: 839 ATELAKVNTGRTLYILDEPTTGLHMADVHKLLEVLQRLVDAGSTVVVIEHNLDVIKSADW 898 Query: 901 IVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLKPML 940 ++DLGPEGG GG ++ +GTPE VA+ S+T +++K +L Sbjct: 899 LIDLGPEGGDRGGTVIATGTPEQVAQVPESYTGQYVKKVL 938 Score = 103 bits (257), Expect = 4e-20, Method: Composition-based stats. Identities = 40/116 (34%), Positives = 60/116 (51%), Gaps = 6/116 (5%) Query: 609 PEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIA 668 E V+ + GAR +NLK+++L +P ITG+SGSGKS+L DT++ QR+ + A Sbjct: 2 NEDVIVIQGARQHNLKNISLNIPRNKLVVITGLSGSGKSSLAFDTIYAEGQRRYVESLSA 61 Query: 669 EPAPYR------DIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGV 718 + D+ + I IDQ R PRS T T ++ +R LFA + Sbjct: 62 YARQFLGQMDKPDVDYIGGLSPAISIDQKTTSRNPRSTVGTVTEIYDYLRLLFARI 117 >UniRef50_Q56242 UvrABC system protein A n=60 Tax=cellular organisms RepID=UVRA_THET8 Length = 952 Score = 1292 bits (3345), Expect = 0.0, Method: Composition-based stats. Identities = 550/947 (58%), Positives = 703/947 (74%), Gaps = 15/947 (1%) Query: 1 MDKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAY 60 MD+I +RGAR HNLKNI+L +PR K IV+TG+SGSGKS+LAFDT+YAEGQRRYVESLS+Y Sbjct: 1 MDRIVIRGAREHNLKNISLELPRGKFIVITGVSGSGKSTLAFDTIYAEGQRRYVESLSSY 60 Query: 61 ARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRC 120 ARQFL +M+KP+V+ IEGLSPAISI+QK+TSHNPRSTVGT+TEIHDYLRLLFARVG+ C Sbjct: 61 ARQFLGVMDKPEVESIEGLSPAISIDQKTTSHNPRSTVGTVTEIHDYLRLLFARVGQAFC 120 Query: 121 PDHDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARID 180 P+ P+ Q+ S++ D +L +P G R +L+AP+++ RKGE+ K + L +GY R R+D Sbjct: 121 PECGRPIEKQSASEITDRLLKRPPGTRAILMAPLVRGRKGEYRKLFQQLLKEGYARVRVD 180 Query: 181 GEVCDLSDPP--KLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVADMD 238 G + L + LE +KH I++V+DR ++++ R+AE+ E AL G V D Sbjct: 181 GVIYLLEEAQGLSLEKYEKHDIDLVIDRVVLKEEERPRIAEAVELALLRGEGLLRVLYPD 240 Query: 239 DPKAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNP 298 EE LFS FACP G + ELEPR+FSFN+P GACP C GLG +Q FDP+ V+ NP Sbjct: 241 T--GEEELFSEKFACPEHGSVLEELEPRIFSFNSPYGACPACSGLGYRQEFDPELVV-NP 297 Query: 299 ELSLAGGAIRGW----DRRNFYYFQMLKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKE 354 ELSLA GAI W D Y + L++LA+H FD++ P+ L + VLYG E Sbjct: 298 ELSLAEGAILPWSRGRDTGRSYLWDRLRALAEHLGFDLKTPFKDLPEEAKRAVLYGLP-E 356 Query: 355 NIEFKYMNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGTRL 414 E + +T +EGV+ +E+RY+E++S VRE L F+S RPC +C GTR Sbjct: 357 PFEVVFRRGGKETFRVEVRYEGVIPWLEKRYQESDSEGVREALEGFMSLRPCPACGGTRY 416 Query: 415 RREARHVYVENTPLPAISDMSIGHAMEFFNNLK--LAGQRAKIAEKILKEIGDRLKFLVN 472 +RE V V + +S + + A+ FF L+ L +A+IA IL+EI +RL FLV+ Sbjct: 417 KREVLSVKVAGRNIAEVSALPVREALAFFQGLEKTLPPFQAQIARPILREIVERLGFLVD 476 Query: 473 VGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLI 532 VGL+YLTL R+A TLSGGEAQRIRLA+Q+G+GL GV+YVLDEPSIGLH RDN+RL+ TL Sbjct: 477 VGLDYLTLDRAANTLSGGEAQRIRLATQVGSGLTGVLYVLDEPSIGLHPRDNQRLIRTLK 536 Query: 533 HLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYM 592 LRDLGNT+IVVEHDE+ +RAAD ++D+GPGAG+HGGEVVA+G LE I+ P+SLTG Y+ Sbjct: 537 RLRDLGNTLIVVEHDEETMRAADWIVDMGPGAGIHGGEVVAQGTLEDILKSPQSLTGAYL 596 Query: 593 SGKRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLIND 652 G+++I VPK+R N K L L GAR +NLK+VTL +P+G F ITG SGSGKSTL++D Sbjct: 597 RGEKRIPVPKERRKGNG-KWLVLKGARAHNLKNVTLRIPLGRFVAITGPSGSGKSTLVHD 655 Query: 653 TLFPIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVR 712 L+ ++L A P PY ++G+EH DKVI+IDQSPIGRTPRSNPATYTGVF +R Sbjct: 656 VLYAALAQRLMRAKTT-PGPYEALEGVEHLDKVIEIDQSPIGRTPRSNPATYTGVFDEIR 714 Query: 713 ELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYN 772 +LFA PE+R RGY PGRFSFNV+GGRCEAC GDG +K+EM FLPD+YVPC+ CKGKRYN Sbjct: 715 DLFAKTPEARKRGYGPGRFSFNVKGGRCEACGGDGTVKIEMLFLPDLYVPCEVCKGKRYN 774 Query: 773 RETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSG 832 +ETLE+K +GK+I +VLDMT+EEA +FF VP++ARKLQ ++DVGL Y++LGQ + TLSG Sbjct: 775 KETLEVKLRGKSIADVLDMTVEEALDFFQNVPSIARKLQLMVDVGLGYMKLGQPSPTLSG 834 Query: 833 GEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNL 892 GEAQR+KLA EL ++ TG+TLYILDEPTTGLHF D+ +LL VLH+L D GNT+VVIEHNL Sbjct: 835 GEAQRIKLATELGRKATGRTLYILDEPTTGLHFDDVAKLLSVLHRLVDAGNTVVVIEHNL 894 Query: 893 DVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLKPM 939 DV+KTADW++DLGPEGG GGEI+ GTPE VA S T FL + Sbjct: 895 DVVKTADWVIDLGPEGGDRGGEIVAEGTPEEVA-LTGSPTGAFLARI 940 >UniRef50_O31151 UvrABC system protein A n=81 Tax=Bacteria RepID=UVRA_ZYMMO Length = 946 Score = 1292 bits (3344), Expect = 0.0, Method: Composition-based stats. Identities = 577/945 (61%), Positives = 732/945 (77%), Gaps = 8/945 (0%) Query: 1 MDKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAY 60 + I +RGAR HNLKN+++ IPR+KL+V+TGLSGSGKSSLAFDT+YAEGQRRYVESLSAY Sbjct: 2 LSTISIRGAREHNLKNVSIDIPRNKLVVMTGLSGSGKSSLAFDTIYAEGQRRYVESLSAY 61 Query: 61 ARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRC 120 ARQFL +M+KPDVDHIEGLSPAISIEQK+TS NPRSTV T+TEI+DY+RLL+ARVG P Sbjct: 62 ARQFLEMMQKPDVDHIEGLSPAISIEQKTTSKNPRSTVATVTEIYDYMRLLWARVGIPYS 121 Query: 121 PDHDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARID 180 P +P+ AQTVSQMVD V++ PEG RL LLAP+++ RKGE+ K + G+ R RID Sbjct: 122 PATGLPITAQTVSQMVDRVMALPEGSRLHLLAPVVRGRKGEYRKEMAEWQKAGFSRLRID 181 Query: 181 GEVCDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVADMDDP 240 GE + + PK++ ++KH IEVVVDR +++ L RLA+S ETAL+L+GG A+ D+ Sbjct: 182 GEYYLIEEAPKIDKKRKHDIEVVVDRLVIKEGLETRLAQSLETALKLAGGIAISEPADEG 241 Query: 241 KAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPEL 300 E +LFS +F+CP+ G+++ E+EPRLFSFN P GACP CDGLG + YFD ++ N L Sbjct: 242 SFEPMLFSEHFSCPVSGFTIPEIEPRLFSFNAPQGACPACDGLGEKPYFDVRLIVPNESL 301 Query: 301 SLAGGAIRGWDR---RNFYYFQMLKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKENIE 357 SLA GA+ W R + YY Q+L SLA +Y F +E PW L + V+LYGS E I Sbjct: 302 SLAKGALMPWARSTPPSPYYMQILSSLARYYDFSLETPWKKLPEKIQNVILYGSEGEVIP 361 Query: 358 FKYMNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGTRLRRE 417 ++ + + FEGV+ N+ERR T+S ++RE++ ++ S PC C G RLR E Sbjct: 362 LRFSEGNQIYEVEKA-FEGVIRNLERRLVTTDSESIREDIGRYQSAAPCEVCHGARLRPE 420 Query: 418 ARHVYVENTPLPAISDMSIGHAMEFFNNL--KLAGQRAKIAEKILKEIGDRLKFLVNVGL 475 A V +++ + ++ M++ A+EFF L KL + +IAE+ILKEI +RL FL NVGL Sbjct: 421 ALAVLIDHHNISDVTKMTVKPALEFFRQLPEKLTEAQNQIAERILKEIIERLGFLDNVGL 480 Query: 476 NYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLR 535 +YL+L RS+ TLSGGE+QRIRLASQIG+GL GV+YVLDEPSIGLHQRDN+RLL TL LR Sbjct: 481 DYLSLDRSSGTLSGGESQRIRLASQIGSGLSGVLYVLDEPSIGLHQRDNDRLLETLKRLR 540 Query: 536 DLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGK 595 DLGN+V+VVEHDEDAIR AD+V+D+GPGAGV GG+V+A G + I+ P+SLTG Y+SG+ Sbjct: 541 DLGNSVLVVEHDEDAIRLADYVVDMGPGAGVMGGKVIAAGSPQDIIDCPDSLTGAYLSGR 600 Query: 596 RKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLF 655 R+I VP KR N +K L + GA NNL++VT ++P+G FTC+TGVSGSGKS+LI DTL+ Sbjct: 601 REIAVPDKRRKGNGKK-LTIKGATANNLQNVTASIPLGTFTCVTGVSGSGKSSLILDTLY 659 Query: 656 PIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELF 715 A R+LNGA + Y+ I GLEH DKVIDIDQSPIGRTPRSNPATYTG FT +RE F Sbjct: 660 TAAARELNGARLIS-GDYKSISGLEHLDKVIDIDQSPIGRTPRSNPATYTGAFTAIREWF 718 Query: 716 AGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRET 775 A +PE++ARGY GRFSFNV+GGRCEACQGDGV K+EMHFLPD+YV CD C G RYNRET Sbjct: 719 AKLPEAQARGYKAGRFSFNVKGGRCEACQGDGVKKIEMHFLPDVYVTCDVCHGARYNRET 778 Query: 776 LEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEA 835 E+K+KG++I +VL+MT+++A EFF+AVP++ K+ L VGL YI++GQ ATTLSGGEA Sbjct: 779 QEVKFKGQSIADVLNMTVDQAAEFFEAVPSIRDKMAMLARVGLGYIKVGQQATTLSGGEA 838 Query: 836 QRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVI 895 QRVKLA+ELSKR TG+TLYILDEPTTGLHF D+++LL+VL+ L DQGN+IVVIEHNLDVI Sbjct: 839 QRVKLAKELSKRATGRTLYILDEPTTGLHFEDVRKLLEVLNALVDQGNSIVVIEHNLDVI 898 Query: 896 KTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLKPML 940 KTADW++DLGPEGG+GGG+I+ +GTPE VAE E S+T +LK ML Sbjct: 899 KTADWLIDLGPEGGTGGGQIIAAGTPEKVAETEGSYTGHYLKRML 943 >UniRef50_Q71WU0 UvrABC system protein A n=44 Tax=Bacteria RepID=UVRA_LISMF Length = 956 Score = 1289 bits (3337), Expect = 0.0, Method: Composition-based stats. Identities = 550/941 (58%), Positives = 715/941 (75%), Gaps = 7/941 (0%) Query: 2 DKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYA 61 +KI ++GAR HNLKNI++ IPRDKL+V+TGLSGSGKSSLAFDT+YAEGQRRYVESLSAYA Sbjct: 4 EKIVIQGARAHNLKNIDVEIPRDKLVVMTGLSGSGKSSLAFDTIYAEGQRRYVESLSAYA 63 Query: 62 RQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCP 121 RQFL M+KPDVD IEGLSPAISI+QK+TS NPRSTVGT+TEIHDYLRLL+ARVG P CP Sbjct: 64 RQFLGQMDKPDVDLIEGLSPAISIDQKTTSRNPRSTVGTVTEIHDYLRLLYARVGHPVCP 123 Query: 122 DHDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARIDG 181 +H + + +QT+ QMVD VL PE R+ ++API+ +KG H KT+E + +GY+R R+DG Sbjct: 124 NHGIEITSQTIEQMVDRVLEYPEKTRIQIMAPIVSGKKGTHKKTIEEIKKEGYVRIRVDG 183 Query: 182 EVCDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVADMDDPK 241 E+ D++D ++E KKH+IE+++DR +++ + RL +S E AL L+ G AVV M D Sbjct: 184 EIYDINDEIEIEKNKKHSIEIIIDRIVIKEGINTRLYDSIEAALRLADGYAVVDIMGD-- 241 Query: 242 AEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPELS 301 +ELLFS ++ACP CG+S+ ELEPR+FSFN+P GACPTCDGLG + D D VI + LS Sbjct: 242 -KELLFSEHYACPYCGFSVGELEPRMFSFNSPFGACPTCDGLGTKLEVDVDTVIPDRSLS 300 Query: 302 LAGGAIRGWDR-RNFYYFQMLKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKENIEFKY 360 L GAI W + YY QML S + D++ P L+ ++L GS + F+Y Sbjct: 301 LNEGAIIPWRPISSQYYPQMLASACKEFGIDMDTPLEKLTKEELDIILNGSKDKEFYFEY 360 Query: 361 MNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGTRLRREARH 420 ND G T PFEG+L N+ERRY+ET S R+++A+++++ PC SC+G RL+ E Sbjct: 361 KNDFGMTRETWIPFEGILPNIERRYRETNSDFTRDQMAQYMTDLPCPSCKGYRLKEETLS 420 Query: 421 VYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTL 480 V V N + IS+ SI A++FF+ L+L+ + +IA I KE+ RL FL NVGL+YLT+ Sbjct: 421 VKVNNHHIGQISEFSINEALDFFDGLELSEKETQIAAPIFKEVRARLGFLKNVGLDYLTM 480 Query: 481 SRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNT 540 SR+A TLSGGEAQRIRLA+QIG+ L GV+Y+LDEPSIGLHQRDN+RL+ TL +RD+GNT Sbjct: 481 SRAAGTLSGGEAQRIRLATQIGSRLTGVLYILDEPSIGLHQRDNDRLISTLQSMRDIGNT 540 Query: 541 VIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEV 600 +IVVEHDED + AAD++IDIGPGAG HGG +VA G E + S+TG Y+SGK+ I V Sbjct: 541 LIVVEHDEDTMMAADYLIDIGPGAGEHGGRIVAAGTPEEVAKNKNSITGDYLSGKKFIPV 600 Query: 601 PKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQR 660 P KR N L++ GA+ NNLK+V +P+ F+C+TGVSGSGKS+L+N+ L R Sbjct: 601 PAKRRKGNG-LELEIIGAKANNLKNVNAKIPLATFSCVTGVSGSGKSSLVNEVLRKALAR 659 Query: 661 QLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPE 720 +LN A+P +++I+G+E+ +K+I+IDQSPIGRTPRSNPATYTG F +R+LFA E Sbjct: 660 KLN-RNHAKPGEHKEIKGIENLEKIINIDQSPIGRTPRSNPATYTGAFDDIRDLFASTNE 718 Query: 721 SRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKY 780 ++ RGY GRFSFNV+GGRCEAC+GDG+IK+EMHFLPD+YVPC+ C GKRYN ETL+I+Y Sbjct: 719 AKVRGYKKGRFSFNVKGGRCEACKGDGIIKIEMHFLPDVYVPCEVCHGKRYNGETLDIRY 778 Query: 781 KGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKL 840 KGK I EVL+MT+EE E+F P +ARKLQT++DVGL YIRLGQ ATTLSGGEAQRVKL Sbjct: 779 KGKNIAEVLEMTVEEGLEYFTNQPRIARKLQTIVDVGLGYIRLGQPATTLSGGEAQRVKL 838 Query: 841 ARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQ-GNTIVVIEHNLDVIKTAD 899 A EL KR G++ YILDEPTTGLH DI +LL VL +L ++ G+T++VIEHNLDVIK AD Sbjct: 839 ASELHKRSNGKSFYILDEPTTGLHADDIGRLLKVLQRLVEENGDTVLVIEHNLDVIKQAD 898 Query: 900 WIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLKPML 940 +++DLGPEGG GGG+I+ +GTPE +A + S+T ++LKP+L Sbjct: 899 YLIDLGPEGGDGGGQIIATGTPEKIARSKKSYTGKYLKPIL 939 >UniRef50_C7N595 Excinuclease ABC subunit A n=57 Tax=Bacteria RepID=C7N595_SLAHD Length = 960 Score = 1283 bits (3321), Expect = 0.0, Method: Composition-based stats. Identities = 536/956 (56%), Positives = 685/956 (71%), Gaps = 20/956 (2%) Query: 2 DKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYA 61 + I +RGAR HNLKN+++ IPRDKL+V+TGLSGSGKSSLAFDT++AEGQRRYVESLS+YA Sbjct: 6 ENIVIRGAREHNLKNVDVDIPRDKLVVITGLSGSGKSSLAFDTIFAEGQRRYVESLSSYA 65 Query: 62 RQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCP 121 RQFL M+KPD+D I+GLSPA++I+QK+TS NPRSTVGT TEI+DYLRLL+AR+G P CP Sbjct: 66 RQFLGQMDKPDLDRIDGLSPAVAIDQKTTSRNPRSTVGTTTEIYDYLRLLYARIGIPHCP 125 Query: 122 DHDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARIDG 181 + + +T Q+ D VL EGKR+++LAP++ RKGEHTK E+L +G+ R RIDG Sbjct: 126 ECGREIRKRTTDQVADEVLELGEGKRVLILAPVVVGRKGEHTKVFEDLQKEGFSRVRIDG 185 Query: 182 EVCDLSD-PPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVADMDDP 240 EV L P KL+ + KHTI+VVVDR ++D R+AES ETA +L+ G VV +D+ Sbjct: 186 EVQRLDGTPIKLDKKFKHTIDVVVDRIVLKDSAIGRIAESIETATKLADGRVVVHVIDEE 245 Query: 241 ----------------KAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLG 284 A + +S ACP G+SM EL+PR FSFN P GACP C GLG Sbjct: 246 DAAADAQKSTPGFSTMSAADHFYSLALACPEHGHSMDELQPRDFSFNAPYGACPDCSGLG 305 Query: 285 VQQYFDPDRVIQNPELSLAGGAIRGWDRRNFYYFQMLKSLADHYKFDVEAPWGSLSANVH 344 ++ DP +I +P LSL+ GAI + YY Q+L ++ H DV+ PW L Sbjct: 306 SREEVDPSLMIPDPSLSLSQGAIAPF-VSGNYYPQVLAAVCKHMGQDVDTPWEDLPKKTQ 364 Query: 345 KVVLYGSGKENIEFKYMNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNR 404 +L+G E + Y G + + G + + +RY++ +S A RE+ K+ + Sbjct: 365 NALLFGLKGEKVRVDYRTVDGRETYWFIDWTGAIDAVMQRYRDAQSDAQREKYGKYFATI 424 Query: 405 PCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIG 464 PCA+C G RL+ E V V + + +MS ++FFN + L+ + A IA I+KEI Sbjct: 425 PCATCGGKRLKPEILAVTVGGKSIDQVCEMSAVECLDFFNGIALSEREAVIATAIVKEIR 484 Query: 465 DRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDN 524 RL+FLV+VGL+YLTL R+ +LSGGEAQRIRLA+QIGAGL+GV+Y+LDEPSIGLHQRDN Sbjct: 485 ARLRFLVDVGLDYLTLERATASLSGGEAQRIRLATQIGAGLMGVLYILDEPSIGLHQRDN 544 Query: 525 ERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVP 584 ERL+ TL LRDLGNTVIVVEHDED IR+AD+VID+GPGAG GG +V+ G E + A Sbjct: 545 ERLIATLERLRDLGNTVIVVEHDEDTIRSADYVIDMGPGAGEKGGYLVSAGTPEEVAACE 604 Query: 585 ESLTGQYMSGKRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGS 644 +S+TG Y+ IEVPKKR +KL GA+ NNLK+VT+ + +G FT +TGVSGS Sbjct: 605 KSITGAYLRRDSVIEVPKKRRNP-KRGSIKLAGAKENNLKNVTIDIEIGTFTVVTGVSGS 663 Query: 645 GKSTLINDTLFPIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATY 704 GKS+LI DTL P +LN A YR + G E DK+IDIDQSPIGRTPRSNPATY Sbjct: 664 GKSSLITDTLAPALANRLNHAH-KRTGAYRKLSGYEELDKIIDIDQSPIGRTPRSNPATY 722 Query: 705 TGVFTPVRELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCD 764 G++ +R LFA PE++ARGY PGRFSFNV GGRCEAC+GDG +K+EMHFLPD+YVPC+ Sbjct: 723 IGLWDDIRALFASTPEAKARGYAPGRFSFNVSGGRCEACKGDGQLKIEMHFLPDVYVPCE 782 Query: 765 QCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLG 824 C GKRYNRETL++ Y+GK +++VLDMT++EA EFF +P L+RKLQTL DVGL YIRLG Sbjct: 783 VCGGKRYNRETLQVTYRGKNVYDVLDMTVDEALEFFKNIPGLSRKLQTLHDVGLGYIRLG 842 Query: 825 QSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNT 884 Q ATTLSGGEAQRVKLA EL +R +G+T+Y+LDEPTTGLH D++QLL+VL +L D GNT Sbjct: 843 QPATTLSGGEAQRVKLASELQRRQSGKTIYVLDEPTTGLHMEDVKQLLEVLQRLVDCGNT 902 Query: 885 IVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLKPML 940 ++VIEHNLDVIK+AD ++DLGPEGG GG ++ GTPE VA E SHT RFL+ +L Sbjct: 903 MLVIEHNLDVIKSADRVIDLGPEGGDRGGTVVAKGTPEKVANNENSHTGRFLRSVL 958 >UniRef50_O26543 UvrABC system protein A n=86 Tax=cellular organisms RepID=UVRA_METTH Length = 962 Score = 1274 bits (3297), Expect = 0.0, Method: Composition-based stats. Identities = 557/944 (59%), Positives = 712/944 (75%), Gaps = 12/944 (1%) Query: 3 KIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYAR 62 KI ++GAR HNL+N++L +PRDK IV+TG+SGSGKSSLAFDT+YAEGQRRYVESLSAYAR Sbjct: 10 KIVIKGAREHNLQNVDLELPRDKFIVITGISGSGKSSLAFDTIYAEGQRRYVESLSAYAR 69 Query: 63 QFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCPD 122 QFL M+KP++D+IEGLSPAISI+QK+T NPRSTVGTITEI+DYLRLLFAR+G+P C Sbjct: 70 QFLGQMKKPEMDYIEGLSPAISIDQKTTRVNPRSTVGTITEIYDYLRLLFARIGKPHCYL 129 Query: 123 HDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARIDGE 182 + QT +Q+VD ++ EG+R+++LAP++++RKGEH + E L QG++R R+DGE Sbjct: 130 CGREIEQQTSTQIVDRIMDDGEGERIIILAPVVRDRKGEHQRVFERLREQGFVRVRVDGE 189 Query: 183 VCDLSDPPKLELQKKHTIEVVVDRFKVR--DDLTQRLAESFETALELSGGTAVVADMDDP 240 + DL D L+ +KH+I+VVVDR VR + +RLA+S ETAL+L GT V P Sbjct: 190 IHDLEDEFDLDRNRKHSIDVVVDRLVVRRDTEFRKRLADSVETALQLGEGTVRVPSTMTP 249 Query: 241 KAEELLFSANFACP-ICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPE 299 EE ++S +FACP G + E+ PR+FSFN+P GACP C+GLG + DPD V+ PE Sbjct: 250 -GEERIYSEHFACPGTAGINFEEISPRMFSFNSPHGACPECNGLGSKLEIDPDLVVPYPE 308 Query: 300 LSLAGGAIRGWDRRN---FYYFQMLKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKENI 356 S+ GAI W + YY QML+++A+HY F ++ P+ L + +LYG+ E I Sbjct: 309 RSINEGAIVPWSKSGKRDNYYHQMLRAVAEHYGFSLDTPFRDLDEEHRRAILYGT-DEKI 367 Query: 357 EFKYMNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGTRLRR 416 +F + + T FEGV+ MER Y ET+S+ +R + +F+SN C C G+RLR Sbjct: 368 QFVFQR-KNRTYRVNRRFEGVIPRMERIYMETKSNYMRTYIGRFMSNHACPVCGGSRLRP 426 Query: 417 EARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNVGLN 476 E+ V + + + +MSI A EFF++LKL + IA ++LKEI +RL+FL++VGL+ Sbjct: 427 ESLSVTINGRSIHDVVEMSIREAHEFFDSLKLTEREEYIAREVLKEIRERLRFLIDVGLD 486 Query: 477 YLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRD 536 YLTLSRS+ TLSGGEAQRIRLA+QIG+GLVGV+Y+LDEPSIGLHQRDN RL+ TL LRD Sbjct: 487 YLTLSRSSGTLSGGEAQRIRLATQIGSGLVGVLYILDEPSIGLHQRDNRRLIETLKRLRD 546 Query: 537 LGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKR 596 LGNT+IVVEHDE+ I +ADHV+DIGPGAG HGG VVAEG E IM P+SLTG Y+SG+ Sbjct: 547 LGNTLIVVEHDEETILSADHVVDIGPGAGEHGGCVVAEGTPEEIMEDPDSLTGAYLSGRE 606 Query: 597 KIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFP 656 I +P+ R + + L + GA NNL+++ + +P+GLFTC+TGVSGSGKSTL+ND L+ Sbjct: 607 TIPLPEVRRRPSG-RYLTVRGAAENNLREIDVRIPLGLFTCVTGVSGSGKSTLVNDILYR 665 Query: 657 IAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFA 716 +LN + + DI+GL+H DKV+ IDQSPIGRTPRSNPATYTGVFT +RELFA Sbjct: 666 GVYERLNHKHM-NAGRHTDIEGLQHIDKVVMIDQSPIGRTPRSNPATYTGVFTHIRELFA 724 Query: 717 GVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETL 776 PE+R RGY PGRFSFNV+GGRCEAC GDG+IK+EMHFL D+YVPC+ C+G+RYN ETL Sbjct: 725 QTPEARKRGYRPGRFSFNVKGGRCEACGGDGIIKIEMHFLADVYVPCEVCRGRRYNEETL 784 Query: 777 EIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQ 836 EI+Y+G+ I EVLDMT+EEA EFF+ +P + RKLQTL DVGL YI+LGQ ATTLSGGEAQ Sbjct: 785 EIRYRGRNIAEVLDMTVEEALEFFENIPQVRRKLQTLYDVGLGYIKLGQPATTLSGGEAQ 844 Query: 837 RVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIK 896 RVKLA+ELS+R TG TLYILDEPTTGLHF DI++LL+VL +L D GNT VVIEHNLDVIK Sbjct: 845 RVKLAKELSRRSTGSTLYILDEPTTGLHFDDIKKLLNVLGRLVDAGNTAVVIEHNLDVIK 904 Query: 897 TADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLKPML 940 +AD I+DLGPEGG GG ++ GTPE VA +HT RFL+ +L Sbjct: 905 SADHIIDLGPEGGERGGLVVAEGTPEEVAAS-GTHTGRFLREVL 947 >UniRef50_P63385 UvrABC system protein A n=172 Tax=cellular organisms RepID=UVRA_STRR6 Length = 943 Score = 1271 bits (3288), Expect = 0.0, Method: Composition-based stats. Identities = 540/943 (57%), Positives = 688/943 (72%), Gaps = 9/943 (0%) Query: 2 DKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYA 61 DKI + GAR HNLKNI++ IPRDKL+VVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYA Sbjct: 3 DKIVIHGARAHNLKNIDVEIPRDKLVVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYA 62 Query: 62 RQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCP 121 RQFL MEKPDVD I+GLSPAISI+QK+TS NPRSTVGT TEI+DYLRLL+ARVG P C Sbjct: 63 RQFLGNMEKPDVDAIDGLSPAISIDQKTTSKNPRSTVGTTTEINDYLRLLYARVGTPYCI 122 Query: 122 DHDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARIDG 181 + + A +V Q+VD VL PE +RL +LAP+I+++KG+H +E + GY+R R+DG Sbjct: 123 NGHGAINASSVEQIVDKVLELPERQRLQILAPVIRKKKGQHKSVIEKVQKDGYVRVRVDG 182 Query: 182 EVCDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVADMDDPK 241 EV D+++ P+L K+H I+VVVDR +++ + RL +S E AL ++ G ++ MDD Sbjct: 183 EVYDVTEVPELSKSKQHNIDVVVDRIVIKEGIRSRLFDSIEAALRIAEGYVIIDTMDD-- 240 Query: 242 AEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPELS 301 ELLFS ++ACP+CG+++ ELEPRLFSFN P G+C CDGLG++ D D V+ + + Sbjct: 241 -SELLFSEHYACPVCGFTVPELEPRLFSFNAPFGSCSECDGLGIKLEVDTDLVVPDASKT 299 Query: 302 LAGGAIRGWDR-RNFYYFQMLKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKENIEFKY 360 L GA+ W+ + YY ML+ + ++ P+ LS ++LYGS + F Y Sbjct: 300 LREGALAPWNPISSNYYPNMLEQAMKVFGVAMDKPFEDLSEEDKNLILYGSDGKEFHFHY 359 Query: 361 MNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGTRLRREARH 420 N+ G PFEGV++N++RRY ET S R ++ +++ C +C+G RL +A Sbjct: 360 ENEFGGVRDIDIPFEGVINNIKRRYHETNSDYTRTQMRLYMNELTCGTCQGYRLNDQALS 419 Query: 421 VYVENT---PLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNVGLNY 477 V V + ISD+SI ++ + L L+ A IA ILKEI DRL FL NVGLNY Sbjct: 420 VRVGGQQGPHIGEISDLSIADHLDLVSQLTLSENEAIIARPILKEIKDRLTFLNNVGLNY 479 Query: 478 LTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDL 537 LTLSRSA TLSGGE+QRIRLA+QIG+ L GV+Y+LDEPSIGLHQRDN+RL+ +L +RDL Sbjct: 480 LTLSRSAGTLSGGESQRIRLATQIGSNLSGVLYILDEPSIGLHQRDNDRLIASLKKMRDL 539 Query: 538 GNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRK 597 GNT+IVVEHDED +R AD++ID+GPGAGV GGE+VA G + + +S+TGQY+SGKR Sbjct: 540 GNTLIVVEHDEDTMREADYLIDVGPGAGVFGGEIVAAGTPKQVARNSKSITGQYLSGKRV 599 Query: 598 IEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPI 657 I VP++R N + +++ GAR NNL++VT P+G F +TGVSGSGKSTLIN L Sbjct: 600 IPVPEERRVGNG-RFIEVIGARENNLQNVTARFPLGKFIAVTGVSGSGKSTLINSILKKA 658 Query: 658 AQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAG 717 ++LN +P ++ I G+EH D++IDIDQSPIGRTPRSNPATYTGVF +R+LFA Sbjct: 659 IAQKLN-RNSDKPGKFKTITGIEHVDRLIDIDQSPIGRTPRSNPATYTGVFDDIRDLFAQ 717 Query: 718 VPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLE 777 E++ RGY GRFSFNV+GGRCEAC GDG+IK+EMHFLPD+YV C+ C G RYN ETLE Sbjct: 718 TNEAKIRGYKKGRFSFNVKGGRCEACSGDGIIKIEMHFLPDVYVACEVCHGTRYNSETLE 777 Query: 778 IKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQR 837 + YK K I +VLDMT+ +A EFF +P + RKLQT+ DVGL Y+ LGQ ATTLSGGEAQR Sbjct: 778 VHYKEKNISQVLDMTVNDAVEFFQHIPKIQRKLQTIKDVGLGYVTLGQPATTLSGGEAQR 837 Query: 838 VKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKT 897 +KLA EL KR TG++ YILDEPTTGLH DI +LL VL + D GNT++VIEHNLDVIKT Sbjct: 838 MKLASELHKRSTGKSFYILDEPTTGLHTEDIARLLKVLARFVDDGNTVLVIEHNLDVIKT 897 Query: 898 ADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLKPML 940 AD I+DLGPEGG GGG I+V+GTPE VA EAS+T +LK L Sbjct: 898 ADHIIDLGPEGGVGGGTIIVTGTPEEVAANEASYTGHYLKGKL 940 >UniRef50_A8ID62 Excinuclease ABC A subunit n=66 Tax=Bacteria RepID=A8ID62_AZOC5 Length = 1084 Score = 1269 bits (3285), Expect = 0.0, Method: Composition-based stats. Identities = 581/944 (61%), Positives = 731/944 (77%), Gaps = 10/944 (1%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 63 + VRGAR HNLKN++L IPRD L+V TGLSGSGKSSLAFDT+YAEGQRRYVESLSAYARQ Sbjct: 128 LSVRGAREHNLKNVDLDIPRDSLVVFTGLSGSGKSSLAFDTIYAEGQRRYVESLSAYARQ 187 Query: 64 FLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCPDH 123 FL +M+KPDVD I+GLSPAISIEQK+TS NPRSTVGT+TEI+DY+RLL+AR G P P Sbjct: 188 FLEMMQKPDVDQIDGLSPAISIEQKTTSKNPRSTVGTVTEIYDYMRLLWARAGVPYSPAT 247 Query: 124 DVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARIDGEV 183 +P+ +QTVSQMVD L PEG RL +LAP+++ RKGE+ K + +G+ R ++DG Sbjct: 248 GLPIESQTVSQMVDRTLDLPEGSRLYILAPVVRGRKGEYRKEMAEFLKKGFQRVKVDGAF 307 Query: 184 CDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVADMD----D 239 ++++ P L+ + KH I+VVVDR VR D+ RLA+SFETAL L+ G AV+ D D Sbjct: 308 HEIAEAPALDKKLKHDIDVVVDRVVVRADIAARLADSFETALGLADGIAVLEFADQKEAD 367 Query: 240 PKAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPE 299 + ++FS FACP+ G+++ E+EPRLFSFNNP GACP CDGLGV+Q DPD V+ + Sbjct: 368 GSPKRVIFSEKFACPVSGFTIPEIEPRLFSFNNPFGACPACDGLGVEQTIDPDLVVPDKS 427 Query: 300 LSLAGGAIRGWDRRNF-YYFQMLKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKENIEF 358 +L GAI W + YY Q L +LA HYKF + P+ L V+L+GSG+E I F Sbjct: 428 RTLKQGAIAPWAKSTSPYYGQTLDALAKHYKFKLTVPFAELPKKAQDVILFGSGEEEIAF 487 Query: 359 KYMNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGTRLRREA 418 Y +D + FEG++ N++RR++ETES REE++K+ S PCA+C G RL+ EA Sbjct: 488 SY-DDGLRAYETKKTFEGIVRNLDRRWRETESDWAREEISKYFSTVPCATCAGYRLKPEA 546 Query: 419 RHVYVENTPLPAISDMSIGHAMEFFNNLK--LAGQRAKIAEKILKEIGDRLKFLVNVGLN 476 V + + + +MS+ A +F +L L+ ++ +IA +ILKEI +RL+FL++VGL Sbjct: 547 LAVKIAGNHIGQVGEMSVRSASAWFEDLPGTLSDKQNEIAARILKEIRERLRFLMDVGLE 606 Query: 477 YLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRD 536 YLTL RS+ TLSGGE+QRIRLASQIG+GL GV+YVLDEPSIGLHQRDN RLL TL LRD Sbjct: 607 YLTLGRSSGTLSGGESQRIRLASQIGSGLSGVLYVLDEPSIGLHQRDNARLLETLKRLRD 666 Query: 537 LGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKR 596 LGNTVIVVEHDEDAI AAD+V+D+GPGAG+HGG +VA+G + I+A P S+TG+Y++G+ Sbjct: 667 LGNTVIVVEHDEDAILAADYVVDVGPGAGIHGGRIVAQGTPQEILADPASITGKYLTGEL 726 Query: 597 KIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFP 656 + P R NP K LKL+GARGNNLK+VT +P+GLFT ITGVSG GKSTL+ DTL+ Sbjct: 727 SVP-PAPRRKPNPRKTLKLSGARGNNLKNVTAEIPLGLFTSITGVSGGGKSTLLIDTLYK 785 Query: 657 IAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFA 716 R+LN A A PAP+ ++GLEH DKVIDIDQSPIGRTPRSNPATYTG FTP+RE F+ Sbjct: 786 AVARRLNNAHDA-PAPFDKLEGLEHLDKVIDIDQSPIGRTPRSNPATYTGAFTPIREWFS 844 Query: 717 GVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETL 776 G+PE++ARGY PGRFSFNV+GGRCEACQGDGVIK+EMHFLPD+YV CD CKGKRYNRETL Sbjct: 845 GLPEAKARGYGPGRFSFNVKGGRCEACQGDGVIKIEMHFLPDVYVTCDVCKGKRYNRETL 904 Query: 777 EIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQ 836 E+ ++ K+I +VLDMT++E EFF AVP++ KL+TL VGL YI++GQ ATTLSGGEAQ Sbjct: 905 EVTFREKSIADVLDMTVDEGAEFFKAVPSVRDKLETLAQVGLGYIKVGQQATTLSGGEAQ 964 Query: 837 RVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIK 896 RVKLA+ELSKR TG+TLYILDEPTTGLHF D+ +LL+VLH+L +QGNT+VVIEHNL+VIK Sbjct: 965 RVKLAKELSKRATGRTLYILDEPTTGLHFHDVAKLLEVLHELVEQGNTVVVIEHNLEVIK 1024 Query: 897 TADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLKPML 940 T+DW++DLGPEGG GGGEILV+G P+ VA+ + SHT FL +L Sbjct: 1025 TSDWVIDLGPEGGDGGGEILVAGPPDVVAKEKRSHTGTFLAEVL 1068 Score = 111 bits (277), Expect = 2e-22, Method: Composition-based stats. Identities = 68/278 (24%), Positives = 114/278 (41%), Gaps = 33/278 (11%) Query: 545 EHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEVPKKR 604 EH D V+ + P V+ GP A + L R + PK R Sbjct: 66 EHPRSVSCRTDAVLKLPPATAGRDPSVLC-GPPPA--SPSSRLMSDRKPSSRAVTAPKDR 122 Query: 605 VPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNG 664 A +L + GAR +NLK+V L +P TG+SGSGKS+L DT++ QR+ Sbjct: 123 RDAR---LLSVRGAREHNLKNVDLDIPRDSLVVFTGLSGSGKSSLAFDTIYAEGQRRYVE 179 Query: 665 ATIAEPAPYRDIQGLEHFDKV------IDIDQSPIGRTPRSNPATYTGVFTPVRELFAGV 718 + A + ++ D++ I I+Q + PRS T T ++ +R L+A Sbjct: 180 SLSAYARQFLEMMQKPDVDQIDGLSPAISIEQKTTSKNPRSTVGTVTEIYDYMRLLWARA 239 Query: 719 PESRARGYTPGRFSFNVRGGRCEACQGDGVI--KVEMHFLPDIYVPCDQCKGKR--YNRE 774 Y+P G E+ ++ +++ +Y+ +G++ Y +E Sbjct: 240 GV----PYSPA------TGLPIESQTVSQMVDRTLDLPEGSRLYILAPVVRGRKGEYRKE 289 Query: 775 TLEIKYKG-KTIHEVLDMTIEEAREFFDAVPALARKLQ 811 E KG + + ++ A PAL +KL+ Sbjct: 290 MAEFLKKGFQRVK------VDGAFHEIAEAPALDKKLK 321 Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats. Identities = 38/123 (30%), Positives = 56/123 (45%), Gaps = 7/123 (5%) Query: 2 DKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYA 61 +++ GAR +NLKN+ IP +TG+SG GKS+L DTLY RR + A A Sbjct: 740 KTLKLSGARGNNLKNVTAEIPLGLFTSITGVSGGGKSTLLIDTLYKAVARRLNNAHDAPA 799 Query: 62 RQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCP 121 ++ +E L I I+Q PRS T T +R F+ + E + Sbjct: 800 -------PFDKLEGLEHLDKVIDIDQSPIGRTPRSNPATYTGAFTPIREWFSGLPEAKAR 852 Query: 122 DHD 124 + Sbjct: 853 GYG 855 >UniRef50_Q8UF86 UvrABC system protein A n=78 Tax=cellular organisms RepID=UVRA_AGRT5 Length = 973 Score = 1268 bits (3282), Expect = 0.0, Method: Composition-based stats. Identities = 564/961 (58%), Positives = 726/961 (75%), Gaps = 24/961 (2%) Query: 1 MDKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAY 60 + I +RGAR HNLK I+L +PR+KLIV+TGLSGSGKSSLAFDT+YAEGQRRYVESLSAY Sbjct: 4 LKTISIRGAREHNLKGIDLDLPRNKLIVMTGLSGSGKSSLAFDTIYAEGQRRYVESLSAY 63 Query: 61 ARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRC 120 ARQFL +M+KPDVD I+GLSPAISIEQK+TS NPRSTVGT+TEI+DY+RLLFARVG P Sbjct: 64 ARQFLEMMQKPDVDQIDGLSPAISIEQKTTSRNPRSTVGTVTEIYDYMRLLFARVGVPYS 123 Query: 121 PDHDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARID 180 P +P+ +QTVSQMVD +L+ EG RL +LAPI++ RKGE+ K L L +G+ R ++D Sbjct: 124 PATGLPIESQTVSQMVDRILAFEEGTRLYILAPIVRGRKGEYKKELAELMKKGFQRVKVD 183 Query: 181 GEVCDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVADMDDP 240 G+ +++D P L+ + KH I+VVVDR VR D+ RLA+S ET L+L+ G A+ D P Sbjct: 184 GQFYEIADVPALDKKYKHDIDVVVDRAVVRPDMAARLADSLETCLKLADGLAIAEFADKP 243 Query: 241 ------------------KAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDG 282 E +LFS FACP+ G+++ E+EPRLFSFNNP GACP+CDG Sbjct: 244 LPPEDTAAGGSANKSLNETHERVLFSEKFACPVSGFTIPEIEPRLFSFNNPFGACPSCDG 303 Query: 283 LGVQQYFDPDRVIQNPELSLAGGAIRGWDRRNF-YYFQMLKSLADHYKFDVEAPWGSLSA 341 LG QQ D + ++ P +L GAI W + + YY Q L++L + F + + W LS Sbjct: 304 LGSQQKVDENLIVPEPARTLRDGAIAPWAKSSSPYYNQTLEALGKAFGFKLSSKWTDLSK 363 Query: 342 NVHKVVLYGSGKENIEFKYMNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFI 401 +L G+ + IEF Y + ++ FEG++ N+ERR+KET+S+ REE+ +++ Sbjct: 364 EAQHAILQGTDDK-IEFNYQDGARSYKTVKN-FEGIVPNLERRWKETDSAWAREEIERYM 421 Query: 402 SNRPCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLK--LAGQRAKIAEKI 459 S PC +C G RL+ EA V + + ++ MSI A ++F L L ++ +IA +I Sbjct: 422 SAAPCPACAGYRLKPEALAVKINKLHIGEVTQMSIRKARDWFEVLPENLNAKQNEIAVRI 481 Query: 460 LKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGL 519 LKEI +RL+FL +VGL+YL+LSR++ TLSGGE+QRIRLASQIG+GL GV+YVLDEPSIGL Sbjct: 482 LKEIRERLRFLNDVGLDYLSLSRNSGTLSGGESQRIRLASQIGSGLTGVLYVLDEPSIGL 541 Query: 520 HQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEA 579 HQRDN RLL TL HLRD+GNTVIVVEHDEDAI AD+V+DIGP AG+HGG+V+AEG + Sbjct: 542 HQRDNARLLETLKHLRDIGNTVIVVEHDEDAILTADYVVDIGPAAGIHGGQVIAEGTPQD 601 Query: 580 IMAVPESLTGQYMSGKRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCIT 639 +MA P+SLTG+Y+SG+ + VP +R + +K+ GARGNNL++VT +P+G+FT +T Sbjct: 602 VMANPKSLTGKYLSGELGVAVPAERRKPKKGREIKVFGARGNNLQNVTAAVPLGVFTAVT 661 Query: 640 GVSGSGKSTLINDTLFPIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRS 699 GVSG GKST + +TL+ A R++ GA PA + I G E DKVIDIDQSPIGRTPRS Sbjct: 662 GVSGGGKSTFLIETLYKSAARRVMGAR-EIPAEHDRIDGFEFIDKVIDIDQSPIGRTPRS 720 Query: 700 NPATYTGVFTPVRELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDI 759 NPATYTG FTP+R+ FAG+PE++ARGY PGRFSFNV+GGRCEACQGDGVIK+EMHFLPD+ Sbjct: 721 NPATYTGAFTPIRDWFAGLPEAKARGYAPGRFSFNVKGGRCEACQGDGVIKIEMHFLPDV 780 Query: 760 YVPCDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLT 819 YV CD C GKRYNRETL++ +KGK+I +VLDMT+EE EFF AVPA+ KLQ+L DVGL Sbjct: 781 YVTCDVCHGKRYNRETLDVTFKGKSIADVLDMTVEEGVEFFAAVPAVRDKLQSLFDVGLG 840 Query: 820 YIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLR 879 YI++GQ A TLSGGEAQRVKLA+ELSKR TG+TLYILDEPTTGLHF D+ +LL++LH L Sbjct: 841 YIKVGQQANTLSGGEAQRVKLAKELSKRSTGRTLYILDEPTTGLHFHDVNKLLEMLHALV 900 Query: 880 DQGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLKPM 939 +QGN++VVIEHNL+VIKTADWI+D+GPEGG+GGGE++ +GTPE + + E S+T FLK + Sbjct: 901 EQGNSVVVIEHNLEVIKTADWIIDIGPEGGTGGGEVVATGTPEDIVKVERSYTGHFLKEL 960 Query: 940 L 940 L Sbjct: 961 L 961 Score = 178 bits (451), Expect = 1e-42, Method: Composition-based stats. Identities = 76/207 (36%), Positives = 109/207 (52%), Gaps = 15/207 (7%) Query: 403 NRPCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKE 462 C C G R RE V + + + DM++ +EFF + Sbjct: 781 YVTCDVCHGKRYNRETLDVTFKGKSIADVLDMTVEEGVEFFAAVP--------------A 826 Query: 463 IGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGV-MYVLDEPSIGLHQ 521 + D+L+ L +VGL Y+ + + A TLSGGEAQR++LA ++ G +Y+LDEP+ GLH Sbjct: 827 VRDKLQSLFDVGLGYIKVGQQANTLSGGEAQRVKLAKELSKRSTGRTLYILDEPTTGLHF 886 Query: 522 RDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIM 581 D +LL L L + GN+V+V+EH+ + I+ AD +IDIGP G GGEVVA G E I+ Sbjct: 887 HDVNKLLEMLHALVEQGNSVVVIEHNLEVIKTADWIIDIGPEGGTGGGEVVATGTPEDIV 946 Query: 582 AVPESLTGQYMSGKRKIEVPKKRVPAN 608 V S TG ++ KR A Sbjct: 947 KVERSYTGHFLKELLDRRPAGKREAAE 973 >UniRef50_Q2YPX5 UvrABC system protein A n=164 Tax=root RepID=UVRA_BRUA2 Length = 974 Score = 1267 bits (3280), Expect = 0.0, Method: Composition-based stats. Identities = 576/960 (60%), Positives = 728/960 (75%), Gaps = 23/960 (2%) Query: 2 DKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYA 61 I +RGAR HNLKN++L +PRDKLIV+TGLSGSGKSSLAFDT+YAEGQRRYVESLSAYA Sbjct: 5 KFISIRGAREHNLKNVDLDLPRDKLIVMTGLSGSGKSSLAFDTIYAEGQRRYVESLSAYA 64 Query: 62 RQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCP 121 RQFL +M+KPDVD I+GLSPAISIEQK+TS NPRSTVGT+TEI+DY+RLLFARVG P P Sbjct: 65 RQFLEMMQKPDVDQIDGLSPAISIEQKTTSRNPRSTVGTVTEIYDYMRLLFARVGIPYSP 124 Query: 122 DHDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARIDG 181 +P+ +QTVSQMVD V++ EG RL +LAPI++ RKGE+ K L L +G+ R ++DG Sbjct: 125 ATGLPIESQTVSQMVDRVIALEEGTRLYILAPIVRGRKGEYRKELAELQKKGFQRVKVDG 184 Query: 182 EVCDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVADMDDP- 240 +++D P L+ + KH I+VVVDR VR DL+ RLA+S ET L+L+ G A+ D P Sbjct: 185 TFYEIADVPPLDKKYKHDIDVVVDRVVVRPDLSTRLADSLETCLKLADGLAIAEFADKPL 244 Query: 241 -----------------KAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGL 283 E +LFS FACP+ G+++ E+EPRLFSFNNP GACPTCDGL Sbjct: 245 PVGETAEGGSANKSANETHERILFSEKFACPVSGFTIPEIEPRLFSFNNPFGACPTCDGL 304 Query: 284 GVQQYFDPDRVIQNPELSLAGGAIRGWDRRNF-YYFQMLKSLADHYKFDVEAPWGSLSAN 342 G QQ DP+ +I + +L GA+ W R + YY Q L++L Y F V A W LS Sbjct: 305 GTQQAIDPNLIIPDESAALKDGAVAPWARSSSPYYNQTLEALGKAYGFKVSARWSELSEE 364 Query: 343 VHKVVLYGSGKENIEFKYMNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFIS 402 + +LYG+ I F Y +D + PFEGV+ N+ERR+KET+S+ REE+ +F++ Sbjct: 365 ARQAILYGTKGREITFHY-DDGLRSYQTTKPFEGVIPNLERRWKETDSAWSREEIERFMA 423 Query: 403 NRPCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLK--LAGQRAKIAEKIL 460 + PC +C G RL+ EA V + + I++MSI A +F ++ ++ +IA +IL Sbjct: 424 STPCPACNGYRLKPEALSVKIGKKHIGEITEMSIRKADAWFRDIDGSFNEKQREIAARIL 483 Query: 461 KEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLH 520 K I +RL+FL NVGL+YLTL+R++ TLSGGE+QRIRLASQIG+GL GV+YVLDEPSIGLH Sbjct: 484 KAIRERLQFLNNVGLDYLTLARNSGTLSGGESQRIRLASQIGSGLTGVLYVLDEPSIGLH 543 Query: 521 QRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAI 580 QRDN RLL TL HLRDLGNTVIVVEHDEDAI AD+V+DIGP AGVHGG+V+A+G + I Sbjct: 544 QRDNARLLDTLRHLRDLGNTVIVVEHDEDAILTADYVVDIGPAAGVHGGKVIAQGSPQDI 603 Query: 581 MAVPESLTGQYMSGKRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITG 640 MA SLTG+Y+SG ++ VP +R + K L++ GARGNNLK+V+ +P+G FT +TG Sbjct: 604 MANTNSLTGKYLSGAMEVAVPAERRKISKTKRLRVVGARGNNLKNVSADIPLGTFTAVTG 663 Query: 641 VSGSGKSTLINDTLFPIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSN 700 VSG GKST + +TLF A R++ G+ PA + I+GLE DKVIDIDQSPIGRTPRSN Sbjct: 664 VSGGGKSTFLIETLFKAASRRIMGSR-EHPAEHDRIEGLEFLDKVIDIDQSPIGRTPRSN 722 Query: 701 PATYTGVFTPVRELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIY 760 PATYTG FTP+R+ FAG+PE++ARGY PGRFSFNV+GGRCEACQGDGVIK+EMHFLPD+Y Sbjct: 723 PATYTGAFTPIRDWFAGLPEAKARGYQPGRFSFNVKGGRCEACQGDGVIKIEMHFLPDVY 782 Query: 761 VPCDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTY 820 V CD C GKRYNRETL++ +KGK+I +VLDMT+EE EFF AVPA+ KL+TL+ VGL Y Sbjct: 783 VTCDVCHGKRYNRETLDVLFKGKSIADVLDMTVEEGAEFFSAVPAVRDKLETLVKVGLGY 842 Query: 821 IRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRD 880 I++GQ ATTLSGGEAQRVKLA+ELS+R TG+TLYILDEPTTGLHF D+ +LL+VLH+L + Sbjct: 843 IKVGQQATTLSGGEAQRVKLAKELSRRATGRTLYILDEPTTGLHFHDVAKLLEVLHELVE 902 Query: 881 QGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLKPML 940 QGNT+VVIEHNL+VIKTADW++DLGPEGG GGGEI+ G PE + + + S+T +FLK +L Sbjct: 903 QGNTVVVIEHNLEVIKTADWVIDLGPEGGDGGGEIVAVGRPEDIVQEKRSYTGQFLKELL 962 Score = 101 bits (253), Expect = 1e-19, Method: Composition-based stats. Identities = 40/117 (34%), Positives = 62/117 (52%), Gaps = 6/117 (5%) Query: 608 NPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATI 667 + +K + + GAR +NLK+V L LP +TG+SGSGKS+L DT++ QR+ + Sbjct: 2 SDQKFISIRGAREHNLKNVDLDLPRDKLIVMTGLSGSGKSSLAFDTIYAEGQRRYVESLS 61 Query: 668 AEPAPYRDIQGLEHFDKV------IDIDQSPIGRTPRSNPATYTGVFTPVRELFAGV 718 A + ++ D++ I I+Q R PRS T T ++ +R LFA V Sbjct: 62 AYARQFLEMMQKPDVDQIDGLSPAISIEQKTTSRNPRSTVGTVTEIYDYMRLLFARV 118 >UniRef50_P63381 UvrABC system protein A n=53 Tax=Bacteria RepID=UVRA_MYCBO Length = 972 Score = 1264 bits (3271), Expect = 0.0, Method: Composition-based stats. Identities = 532/952 (55%), Positives = 687/952 (72%), Gaps = 16/952 (1%) Query: 2 DKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYA 61 D++ V+GAR HNL++++L +PRD LIV TGLSGSGKSSLAFDT++AEGQRRYVESLSAYA Sbjct: 3 DRLIVKGAREHNLRSVDLDLPRDALIVFTGLSGSGKSSLAFDTIFAEGQRRYVESLSAYA 62 Query: 62 RQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCP 121 RQFL M+KPDVD IEGLSPA+SI+QKST+ NPRSTVGTITE++DYLRLL+AR G P CP Sbjct: 63 RQFLGQMDKPDVDFIEGLSPAVSIDQKSTNRNPRSTVGTITEVYDYLRLLYARAGTPHCP 122 Query: 122 DHDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARIDG 181 +A QT Q+VD VL+ PEG R ++LAP+++ RKGE + L +QGY R R+DG Sbjct: 123 TCGERVARQTPQQIVDQVLAMPEGTRFLVLAPVVRTRKGEFADLFDKLNAQGYSRVRVDG 182 Query: 182 EVCDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVADMDDPK 241 V L+DPPKL+ Q+KH IEVVVDR V+ +RL +S ETAL L+ G V+ +D Sbjct: 183 VVHPLTDPPKLKKQEKHDIEVVVDRLTVKAAAKRRLTDSVETALNLADGIVVLEFVDHEL 242 Query: 242 A---EELLFSANFACPICG-YSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQN 297 E FS ACP ++ +LEPR FSFN+P GACP C GLG+++ DP+ V+ + Sbjct: 243 GAPHREQRFSEKLACPNGHALAVDDLEPRSFSFNSPYGACPECSGLGIRKEVDPELVVPD 302 Query: 298 PELSLAGGAIRGWDRRNF--YYFQMLKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKEN 355 P+ +LA GA+ W + Y+ +M+ L + FDV+ PW L A K +L G+ E Sbjct: 303 PDRTLAQGAVAPWSNGHTAEYFTRMMAGLGEALGFDVDTPWRKLPAKARKAILEGA-DEQ 361 Query: 356 IEFKYMNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGTRLR 415 + +Y N G T FEGVL ++R+ +TES ++E F+ + PC C GTRL+ Sbjct: 362 VHVRYRNRYGRTRSYYADFEGVLAFLQRKMSQTESEQMKERYEGFMRDVPCPVCAGTRLK 421 Query: 416 REARHVYVEN--------TPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDRL 467 E V + + + ++SI +F N L L + IA ++LKEI RL Sbjct: 422 PEILAVTLAGESKGEHGAKSIAEVCELSIADCADFLNALTLGPREQAIAGQVLKEIRSRL 481 Query: 468 KFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERL 527 FL++VGL YL+LSR+A TLSGGEAQRIRLA+QIG+GLVGV+YVLDEPSIGLHQRDN RL Sbjct: 482 GFLLDVGLEYLSLSRAAATLSGGEAQRIRLATQIGSGLVGVLYVLDEPSIGLHQRDNRRL 541 Query: 528 LGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESL 587 + TL LRDLGNT+IVVEHDED I AD ++DIGPGAG HGG +V GP + ++ +S+ Sbjct: 542 IETLTRLRDLGNTLIVVEHDEDTIEHADWIVDIGPGAGEHGGRIVHSGPYDELLRNKDSI 601 Query: 588 TGQYMSGKRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKS 647 TG Y+SG+ IE+P R +P + L + GAR +NL+ + ++ P+G+ T +TGVSGSGKS Sbjct: 602 TGAYLSGRESIEIPAIRRSVDPRRQLTVVGAREHNLRGIDVSFPLGVLTSVTGVSGSGKS 661 Query: 648 TLINDTLFPIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGV 707 TL+ND L + +LNGA P + + GL++ DK++ +DQSPIGRTPRSNPATYTGV Sbjct: 662 TLVNDILAAVLANRLNGAR-QVPGRHTRVTGLDYLDKLVRVDQSPIGRTPRSNPATYTGV 720 Query: 708 FTPVRELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCK 767 F +R LFA E++ RGY PGRFSFNV+GGRCEAC GDG IK+EM+FLPD+YVPC+ C+ Sbjct: 721 FDKIRTLFAATTEAKVRGYQPGRFSFNVKGGRCEACTGDGTIKIEMNFLPDVYVPCEVCQ 780 Query: 768 GKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSA 827 G RYNRETLE+ YKGKT+ EVLDM+IEEA EFF+ + + R L+TL+DVGL Y+RLGQ A Sbjct: 781 GARYNRETLEVHYKGKTVSEVLDMSIEEAAEFFEPIAGVHRYLRTLVDVGLGYVRLGQPA 840 Query: 828 TTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVV 887 TLSGGEAQRVKLA EL KR TG+T+YILDEPTTGLHF DI++LL+V++ L D+GNT++V Sbjct: 841 PTLSGGEAQRVKLASELQKRSTGRTVYILDEPTTGLHFDDIRKLLNVINGLVDKGNTVIV 900 Query: 888 IEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLKPM 939 IEHNLDVIKT+DWI+DLGPEGG+GGG ++ GTPE VA AS+T +FL + Sbjct: 901 IEHNLDVIKTSDWIIDLGPEGGAGGGTVVAQGTPEDVAAVPASYTGKFLAEV 952 >UniRef50_O66911 UvrABC system protein A n=11 Tax=cellular organisms RepID=UVRA_AQUAE Length = 926 Score = 1250 bits (3234), Expect = 0.0, Method: Composition-based stats. Identities = 530/943 (56%), Positives = 690/943 (73%), Gaps = 27/943 (2%) Query: 1 MDKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAY 60 MD+I +RGAR HNLKNI++ IP++KL+V+TG SGSGKSSLAFDTLYAEGQRRYVESLSAY Sbjct: 1 MDRIVIRGARQHNLKNIDVEIPKNKLVVITGPSGSGKSSLAFDTLYAEGQRRYVESLSAY 60 Query: 61 ARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRC 120 ARQFL +MEKP+VD IEGLSPAI+I+QK+TS NPRSTVGT+TEI+DYLR+L+A VG+P C Sbjct: 61 ARQFLGVMEKPEVDSIEGLSPAIAIDQKTTSKNPRSTVGTVTEIYDYLRVLWANVGKPHC 120 Query: 121 PDHDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARID 180 P L+ + +++D ++ + +GKR+M+L+PI++ +KGE + L + GY R ++D Sbjct: 121 PHCGNLLSGLSAHEILDRIVEKYKGKRVMILSPIVRGKKGEFRELLRQIEKWGYSRVKVD 180 Query: 181 GEVCDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVADMDDP 240 GE+ + + P LE KKHTIE+V+DR V ++ RL E E ALE S G + +++ Sbjct: 181 GELRRVIEVPPLEKNKKHTIELVIDRLTVSEEERARLLEDVEKALEFSSGLVKIEEVESG 240 Query: 241 KAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPEL 300 K E LFS CP G+S+ EL RLFSFN+P GACP+C GLGV+ DP +I +PE Sbjct: 241 KEE--LFSEKLVCPEHGFSIPELSARLFSFNSPYGACPSCKGLGVKWEIDPAVLI-DPEK 297 Query: 301 SLAGGAIRGWDRRNFYYFQM-LKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKENIEFK 359 A A++ + F Y + + ++ +D PW L +V VLYGS N Sbjct: 298 P-AVKAVKIVESGYFNYLRFPIANVIRKLGYDPRTPWKKLPESVRATVLYGSESLN---- 352 Query: 360 YMNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGTRLRREAR 419 FEG++ ++ERR+ E ES +REE+ +I +PC C+G RLR+EA Sbjct: 353 --------------FEGIIPHLERRFLEEESERIREEIEDYIVEKPCPECKGARLRKEAL 398 Query: 420 HVYVENTPLPAISDMSIGHAMEFFNNL--KLAGQRAKIAEKILKEIGDRLKFLVNVGLNY 477 V ++ + + +M +G A EFF L KL G+ IA+++LKEI +RL FLVNVGL+Y Sbjct: 399 AVLIDGKSIWDVVNMPVGKAKEFFEELYEKLEGKEKIIADRLLKEIIERLGFLVNVGLDY 458 Query: 478 LTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDL 537 L+LSRSA TLSGGE QRIRLA+Q+G+ L GV+YVLDEPSIGLH RD +L+ TL LRDL Sbjct: 459 LSLSRSATTLSGGEMQRIRLATQLGSKLTGVLYVLDEPSIGLHPRDTSKLINTLKGLRDL 518 Query: 538 GNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRK 597 GNTV+VVEHD + I +ADHVI++GPGAG HGG +VA+G +E I + P SLTG Y+SG+++ Sbjct: 519 GNTVVVVEHDPETIESADHVIELGPGAGKHGGYLVAQGTVEEIKSHPSSLTGAYLSGRKE 578 Query: 598 IEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPI 657 I VPK+R + K +++ A+ +NLK++ + +P+GLF CITGVSGSGKSTLI D L+ Sbjct: 579 IPVPKERRKPSG-KFIRIVRAKEHNLKNINVDIPLGLFVCITGVSGSGKSTLIYDILYKY 637 Query: 658 AQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAG 717 A+ G T + I+GLE+ DKVI+IDQSPIGRTPRSNPATYT VF +R LFA Sbjct: 638 AKNYFYG-THEQVGEVEKIEGLENIDKVINIDQSPIGRTPRSNPATYTKVFDLIRNLFAQ 696 Query: 718 VPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLE 777 PE++ARGY PGRFSFNV+GGRCEACQG+GVIKVEMHFLP +YV C+ CKGKRYNRETLE Sbjct: 697 TPEAKARGYKPGRFSFNVKGGRCEACQGEGVIKVEMHFLPPVYVTCEVCKGKRYNRETLE 756 Query: 778 IKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQR 837 I YKGK I +VL+MT++EA +FF+ PA+ RKLQ L DVGL YI+LGQ A TLSGGEAQR Sbjct: 757 ITYKGKNIADVLEMTVDEAYDFFENHPAIRRKLQILKDVGLGYIKLGQPAPTLSGGEAQR 816 Query: 838 VKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKT 897 +KLARELSK+ TG+TLY+LDEPTTGLH D+++L+DVL +L D+GNT+VVIEHNLDVIK Sbjct: 817 IKLARELSKKETGRTLYLLDEPTTGLHMDDVKKLIDVLQRLVDKGNTVVVIEHNLDVIKC 876 Query: 898 ADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLKPML 940 ADWI+DLGPEGG GG+++ GTPE VA+ S+T ++L+ L Sbjct: 877 ADWIIDLGPEGGERGGQVVAVGTPEEVAQNPNSYTGKYLRKYL 919 Score = 204 bits (519), Expect = 1e-50, Method: Composition-based stats. Identities = 77/201 (38%), Positives = 110/201 (54%), Gaps = 15/201 (7%) Query: 403 NRPCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKE 462 C C+G R RE + + + + +M++ A +FF N Sbjct: 739 YVTCEVCKGKRYNRETLEITYKGKNIADVLEMTVDEAYDFFEN--------------HPA 784 Query: 463 IGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGV-MYVLDEPSIGLHQ 521 I +L+ L +VGL Y+ L + A TLSGGEAQRI+LA ++ G +Y+LDEP+ GLH Sbjct: 785 IRRKLQILKDVGLGYIKLGQPAPTLSGGEAQRIKLARELSKKETGRTLYLLDEPTTGLHM 844 Query: 522 RDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIM 581 D ++L+ L L D GNTV+V+EH+ D I+ AD +ID+GP G GG+VVA G E + Sbjct: 845 DDVKKLIDVLQRLVDKGNTVVVIEHNLDVIKCADWIIDLGPEGGERGGQVVAVGTPEEVA 904 Query: 582 AVPESLTGQYMSGKRKIEVPK 602 P S TG+Y+ K E K Sbjct: 905 QNPNSYTGKYLRKYLKKETLK 925 >UniRef50_A7NS89 Excinuclease ABC, A subunit n=3 Tax=Bacteria RepID=A7NS89_ROSCS Length = 1043 Score = 1246 bits (3224), Expect = 0.0, Method: Composition-based stats. Identities = 541/1030 (52%), Positives = 693/1030 (67%), Gaps = 92/1030 (8%) Query: 2 DKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYA 61 D I ++GAR HNLK I+L IPRDKL+V+TG+SGSGKSSLAFDTLYAEGQRRYVESLSAYA Sbjct: 4 DAIVIKGAREHNLKGIDLEIPRDKLVVLTGVSGSGKSSLAFDTLYAEGQRRYVESLSAYA 63 Query: 62 RQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCP 121 RQFL MEKP VD IEGLSPAI+IEQKS S NPRSTVGT+TEI+DYLRLL+ARVG C Sbjct: 64 RQFLGQMEKPKVDAIEGLSPAIAIEQKSASKNPRSTVGTVTEIYDYLRLLYARVGTQHCH 123 Query: 122 DHDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARIDG 181 P+++Q+ QMV+ VL+ P G R M+LAP++ +RKGE+ ++G+ R R+DG Sbjct: 124 VCGRPVSSQSAEQMVNRVLTLPTGTRFMVLAPLVSQRKGEYKDVFAEARAEGFARVRVDG 183 Query: 182 EVCDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQR------------------------- 216 E+ DL+ KL + KHTIE+V+DR + R Sbjct: 184 EIFDLAGEIKLNKKVKHTIEIVIDRLAMPARDAARDQVRSSDAPIGRAQEGSQSEWDAFV 243 Query: 217 --LAESFETALELSGGTAVVADMD-DPKAEELLFSANFACPICGYSMRELEPRLFSFNNP 273 L +S E AL + G +++ + AEE L S C CG S EL P++FSFN+P Sbjct: 244 TRLTDSVEQALRVGEGQLIISIQNKTGAAEEWLMSEANTCTHCGISFPELSPQMFSFNSP 303 Query: 274 AGACPTCDGLGVQQYFDPDRVIQNPELSLAGGAIRGW----DRRNFYYFQMLKSLADHYK 329 GACP C GLGV+ DP ++ NP L+L GA+ W +R+ + ++ L ++A HY Sbjct: 304 QGACPECTGLGVRLEVDPLLLVPNPSLTLHEGAVTYWGELRKKRDSWGYRALLAIARHYG 363 Query: 330 FDVEAPWGSLSANVHKVVLYGSGKENIEFKYMNDRGDTSIRR-HPFEGVLHNMERRYKET 388 FD++ PW LS V++YGSGKE I F++ ++ GD+ +EG+ + RR+++T Sbjct: 364 FDLDTPWEQLSEQARHVIIYGSGKERIRFQWGDEGGDSRGEFTRTWEGLASEIRRRFQQT 423 Query: 389 ESSAVREELAKFISNRPCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNL-- 446 S RE F+S +PC +C G RLR E+ V V + ++ M+I A+ + N L Sbjct: 424 GSDYTREYYQSFMSEQPCPACSGARLRPESLAVRVGGLSIRDVTRMTIAGALAWVNALSG 483 Query: 447 --------------------------------KLAGQRAKIAEKILKEIGDRLKFLVNVG 474 L + I +LKEI +RL FL+NVG Sbjct: 484 ISGNIAHLADLEGQVMPGVVAGNGAAHHGAVTPLTDYQMAIVNDVLKEIRERLGFLLNVG 543 Query: 475 LNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHL 534 L+YLTL R A TLSGGEAQRIRLASQIG+GLVGV Y+LDEPSIGLHQRDN +LL TL+ L Sbjct: 544 LHYLTLERPAPTLSGGEAQRIRLASQIGSGLVGVTYILDEPSIGLHQRDNRKLLDTLLKL 603 Query: 535 RDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSG 594 RDLGNTV+VVEHD + ++AAD +ID GPGAGV GG+VVA GP + A PESLTG Y++G Sbjct: 604 RDLGNTVVVVEHDLETMQAADWIIDFGPGAGVKGGQVVAAGPPNVVAASPESLTGAYLAG 663 Query: 595 KRKIEVPKKRVPAN------------------------PEKVLKLTGARGNNLKDVTLTL 630 + +I P++R A L+L GA NNL+DVT+ Sbjct: 664 RLEIPTPQQRRTARVRPVANGLQDAPRRRRVDHQSDLAEGPWLELEGATMNNLRDVTVRF 723 Query: 631 PVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQ 690 P+G+F C+TGVSGSGKS+LI +TL+P +L+ A + +P P+R ++GLEH DKVIDIDQ Sbjct: 724 PLGVFMCVTGVSGSGKSSLITETLYPALANRLHRAQL-KPGPFRALRGLEHLDKVIDIDQ 782 Query: 691 SPIGRTPRSNPATYTGVFTPVRELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIK 750 PIGRTPRSNPATY +F +RELFA E++ RGY GRFSFN++GGRCEAC+G+G + Sbjct: 783 QPIGRTPRSNPATYVKLFDLIRELFASTNEAKLRGYNAGRFSFNLKGGRCEACEGNGEKR 842 Query: 751 VEMHFLPDIYVPCDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKL 810 ++M FL D++V CD CKGKRYNRETL++KYKGK+I +VLDM ++ A EFFD VP + R L Sbjct: 843 IDMQFLADVWVRCDVCKGKRYNRETLQVKYKGKSIADVLDMDVQTALEFFDNVPRIKRML 902 Query: 811 QTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQ 870 QTL DVGL YI+LGQSATTLSGGEAQRVKLA+EL++ TG+T+YILDEPTTGLHFAD+Q+ Sbjct: 903 QTLHDVGLDYIKLGQSATTLSGGEAQRVKLAKELARVATGRTMYILDEPTTGLHFADVQR 962 Query: 871 LLDVLHKLRDQGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEAS 930 LL VLH+L D GNT++VIEHNLDVIKTADWI+D+GPEGG GGG ++ GTPE VA EAS Sbjct: 963 LLTVLHRLVDAGNTVLVIEHNLDVIKTADWIIDMGPEGGDGGGTVVAVGTPEEVAMIEAS 1022 Query: 931 HTARFLKPML 940 HT RFL+ +L Sbjct: 1023 HTGRFLREIL 1032 Score = 96.5 bits (239), Expect = 5e-18, Method: Composition-based stats. Identities = 37/116 (31%), Positives = 57/116 (49%), Gaps = 6/116 (5%) Query: 609 PEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIA 668 + + + GAR +NLK + L +P +TGVSGSGKS+L DTL+ QR+ + A Sbjct: 2 AKDAIVIKGAREHNLKGIDLEIPRDKLVVLTGVSGSGKSSLAFDTLYAEGQRRYVESLSA 61 Query: 669 EPAPYR------DIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGV 718 + + +E I I+Q + PRS T T ++ +R L+A V Sbjct: 62 YARQFLGQMEKPKVDAIEGLSPAIAIEQKSASKNPRSTVGTVTEIYDYLRLLYARV 117 >UniRef50_Q46577 UvrABC system protein A n=5 Tax=Bacteria RepID=UVRA_DEIRA Length = 1016 Score = 1245 bits (3223), Expect = 0.0, Method: Composition-based stats. Identities = 541/979 (55%), Positives = 694/979 (70%), Gaps = 45/979 (4%) Query: 2 DKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYA 61 DK+ VRGAR HNLK+I + +PRD+ +V+TG+SGSGKS+LAFDT+YAEGQRRYVESLSAYA Sbjct: 3 DKLIVRGAREHNLKDITVELPRDRFVVITGVSGSGKSTLAFDTIYAEGQRRYVESLSAYA 62 Query: 62 RQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCP 121 RQFL LMEKPDVD I GLSPAISI+QK+TSHNPRSTVGT+TEIHDYLRLL+ARVG P CP Sbjct: 63 RQFLGLMEKPDVDSITGLSPAISIDQKTTSHNPRSTVGTVTEIHDYLRLLYARVGTPYCP 122 Query: 122 DHDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARIDG 181 + Q+ S++ D +L+ KR +LLAP ++ RKGE+ K +L +GY R R+DG Sbjct: 123 ICGRKIEKQSPSEVTDRLLAGFPDKRAILLAPAVRGRKGEYKKLFADLRREGYARVRVDG 182 Query: 182 EVCDLSDPPKLELQK--KHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVADMD- 238 + +L + KL+L+K KH +++V+DR +R+ R+AES E + G V D Sbjct: 183 TLYELEEAEKLKLEKFEKHDVDIVIDRLTLRESDRSRIAESVELGIRRGEGLLRVLLPDA 242 Query: 239 --DPKAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQ 296 D A E L+S FACP G + ELEPR FSFN+P GAC C G+G +Q F P+R+I Sbjct: 243 GEDGGAHEELYSEKFACPEHGSVLEELEPRSFSFNSPYGACGDCAGIGAKQEFSPERII- 301 Query: 297 NPELSLAGGAIRGWDRRNF----YYFQMLKSLADHYKFDVEAPWGSLSANVHKVVLYGSG 352 + +LS+AGGAI W ++ YY+ LK+LA+H FD++ PW L A K VL+G G Sbjct: 302 DEKLSIAGGAIIPWTKKGADAGIYYWDKLKALAEHLDFDLKTPWKDLPAKAQKAVLHGPG 361 Query: 353 KENIEFKYMNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGT 412 E E Y +T FEGV+ N+ERRY +TES +RE L + + RPC +C GT Sbjct: 362 -EAFEVVYRRGGKETMRFMTEFEGVITNLERRYADTESEFMRERLEELMELRPCPTCGGT 420 Query: 413 RLRREARHVYVENTPLPAISDMSIGHAMEFFNNLK------------------------- 447 R + E V V + S MS+ A FF L+ Sbjct: 421 RYKPEILAVRVGGLNISQTSGMSVLDADAFFQQLQEGELDHAAIEPFLKRHTGGTAKAHG 480 Query: 448 -------LAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQ 500 L A +A IL+ I RLKFLV+VGL+YL+L R+A TLSGGEAQRIRLA+Q Sbjct: 481 PLHYEYDLGTFGAAVAAPILRAIRTRLKFLVDVGLDYLSLDRTANTLSGGEAQRIRLATQ 540 Query: 501 IGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDI 560 +G+GL GV+YVLDEPSIGLH +DN RL+GTL +LRDLGN+++VVEHDED + AD++ID+ Sbjct: 541 VGSGLTGVLYVLDEPSIGLHPKDNGRLIGTLKNLRDLGNSLLVVEHDEDTMLEADYLIDM 600 Query: 561 GPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEVPKKRVPANPEKVLKLTGARG 620 GPGAGVHGGEV+A G E + SLTG+Y+ G+ KIEVP +R P N K LK+ GAR Sbjct: 601 GPGAGVHGGEVIASGTPEQVKQDKNSLTGKYLRGEMKIEVPAERRPGNG-KFLKVFGARQ 659 Query: 621 NNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAEPAPYRDIQGLE 680 NNL+DV +++P+G T +TG SGSGKSTLI+D L R+LNGA P Y I+G+E Sbjct: 660 NNLQDVDVSIPLGTMTVVTGPSGSGKSTLIHDILHATLARELNGAKTT-PGLYDRIEGME 718 Query: 681 HFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESRARGYTPGRFSFNVRGGRC 740 DKVI+IDQSPIGRTPRSNPATYTGVFT +R+LF PE+R RGY GRFSFNV+GGRC Sbjct: 719 QLDKVIEIDQSPIGRTPRSNPATYTGVFTEIRDLFTRTPEARRRGYQAGRFSFNVKGGRC 778 Query: 741 EACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFF 800 E C+GDGV+K+EM+FLPDIYVPC+ C G RYNRETLE+KY KTI +VLD+T+E+A EFF Sbjct: 779 EHCKGDGVMKIEMNFLPDIYVPCEVCHGARYNRETLEVKYNHKTIADVLDLTVEDAHEFF 838 Query: 801 DAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPT 860 +A+P + RK+Q L+DVGL Y+++GQ +TTLSGGEAQR+KLA ELSKR TG+T+YILDEPT Sbjct: 839 EAIPTIERKMQLLLDVGLGYMKIGQPSTTLSGGEAQRIKLATELSKRATGRTIYILDEPT 898 Query: 861 TGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGT 920 TGLHF D+++L+DVL +L + GNT+V+IEHNLDV+K+AD+++DLGPEGG GG ++ GT Sbjct: 899 TGLHFEDVRKLMDVLQRLAEGGNTLVIIEHNLDVMKSADYLIDLGPEGGVRGGTVVAVGT 958 Query: 921 PETVAECEASHTARFLKPM 939 PE VA S+T +L+ + Sbjct: 959 PEEVAAHPTSYTGEYLRKV 977 Score = 197 bits (500), Expect = 2e-48, Method: Composition-based stats. Identities = 81/281 (28%), Positives = 127/281 (45%), Gaps = 42/281 (14%) Query: 353 KENIEFKYMNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFIS---------- 402 + IE + GV + + T + R A S Sbjct: 721 DKVIEIDQSPIGRTPRSNPATYTGVFTEIRDLFTRTPEARRRGYQAGRFSFNVKGGRCEH 780 Query: 403 -----------------NRPCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNN 445 PC C G R RE V + + + D+++ A EFF Sbjct: 781 CKGDGVMKIEMNFLPDIYVPCEVCHGARYNRETLEVKYNHKTIADVLDLTVEDAHEFFEA 840 Query: 446 LKLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGL 505 + I +++ L++VGL Y+ + + + TLSGGEAQRI+LA+++ Sbjct: 841 IPT--------------IERKMQLLLDVGLGYMKIGQPSTTLSGGEAQRIKLATELSKRA 886 Query: 506 VGV-MYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGA 564 G +Y+LDEP+ GLH D +L+ L L + GNT++++EH+ D +++AD++ID+GP Sbjct: 887 TGRTIYILDEPTTGLHFEDVRKLMDVLQRLAEGGNTLVIIEHNLDVMKSADYLIDLGPEG 946 Query: 565 GVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEVPKKRV 605 GV GG VVA G E + A P S TG+Y+ I + R Sbjct: 947 GVRGGTVVAVGTPEEVAAHPTSYTGEYLRKVPGIVAAEPRA 987 >UniRef50_Q21RX9 Excinuclease ABC subunit A n=19 Tax=Bacteria RepID=Q21RX9_RHOFD Length = 1052 Score = 1239 bits (3207), Expect = 0.0, Method: Composition-based stats. Identities = 621/1030 (60%), Positives = 763/1030 (74%), Gaps = 91/1030 (8%) Query: 1 MDKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAY 60 + I +RGARTHNLKNI+L IPR++L+V+TGLSGSGKSSLAFDTLYAEGQRRYVESLS Y Sbjct: 24 LQNISIRGARTHNLKNIDLDIPRNQLVVITGLSGSGKSSLAFDTLYAEGQRRYVESLSTY 83 Query: 61 ARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRC 120 ARQFL LM+KPDVD IEGLSPAISIEQK+TSHNPRSTVGT+TEIHDYLRLLFAR G P C Sbjct: 84 ARQFLQLMDKPDVDLIEGLSPAISIEQKATSHNPRSTVGTVTEIHDYLRLLFARAGTPFC 143 Query: 121 PDHDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARID 180 P+HD+PL +QTVSQMVD VL+ P RLM+LAP+ +E+KGE ++ +QGY+R R++ Sbjct: 144 PEHDLPLQSQTVSQMVDAVLALPLDTRLMILAPLAREKKGEFLDVFADMQAQGYVRFRVN 203 Query: 181 GEVCDLSDPPKLELQKKHTIEVVVDRFKVR------------------------------ 210 G+ + + P L+ +KH I+VV+DR KVR Sbjct: 204 GQAFEFDELPALKKTEKHDIDVVIDRIKVRHPPAQQASAEADSDAAPDPTPDASRSAAQA 263 Query: 211 --DDLTQRLAESFETALELSGGTAVVADMDDPKAE--------ELLFSANFACPICGYSM 260 ++L QRLAESFE AL L+GG A+ ++D E +F+A FACP+C YS+ Sbjct: 264 DFENLRQRLAESFEAALRLAGGRAIAVEIDSVSRNNDGGYRPIEHIFNAKFACPVCSYSI 323 Query: 261 RELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPELSLAGGAIRGWDRRNFYYFQM 320 ELEPRLFSFN+P GACP CDGLG +FDP RV+ P LSLAGGAI+GWDRRN YYF M Sbjct: 324 AELEPRLFSFNSPVGACPACDGLGANDFFDPARVVAFPSLSLAGGAIKGWDRRNAYYFAM 383 Query: 321 LKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKENIEFKYMND----RGDTSIRRHPFEG 376 L+SLA HY+FD+E + SL V VL+GSG+E+I+F Y+ D G ++HPFEG Sbjct: 384 LESLAAHYQFDIEQAFESLPPTVQHAVLFGSGEEDIKFSYVMDSGTQTGKKVSKKHPFEG 443 Query: 377 VLHNMERRYKETESSAVREELAKFISNRPCASCEGTRLRREARHVYVE----NTPLPAIS 432 ++ NM+RRY ET+S+ VRE+LA++ S +PC C G+RLRREARHV + + +S Sbjct: 444 IIPNMQRRYAETDSAVVREDLARYRSTQPCPQCGGSRLRREARHVKIGEGEQARAIFELS 503 Query: 433 DMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEA 492 +++ + ++FN L + G + +IA K+++EIG RLKFL +VGLNYL+L RSAE+LSGGE+ Sbjct: 504 HLTLRESYQYFNTLSMHGAKGEIASKVVREIGLRLKFLNDVGLNYLSLDRSAESLSGGES 563 Query: 493 QRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIR 552 QRIRLASQIG+GL GVMYVLDEPSIGLHQRDN+RL+GTL HLRD+GN+V+VVEHDED +R Sbjct: 564 QRIRLASQIGSGLTGVMYVLDEPSIGLHQRDNDRLIGTLKHLRDIGNSVLVVEHDEDMMR 623 Query: 553 AADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEVPKKRVPANPEK- 611 AADH+ID+GPGAG+HGG V+A+G E + A ESLTGQY++ +I VP++R P P Sbjct: 624 AADHIIDMGPGAGLHGGRVMAQGTFEQVRANTESLTGQYLAHTLRIAVPRQRTPWLPTVQ 683 Query: 612 -------------------------------------VLKLTGARGNNLKDVTLTLPVGL 634 L++ GA G+NL+ V + PVGL Sbjct: 684 ARAAADKPKAHRFAPSPAALRRAEREALHLATQGKLQSLRVIGASGHNLQGVDVEFPVGL 743 Query: 635 FTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIG 694 FTC+TGVSGSGKSTL+NDTL+ R L A EPA + I+G+EHFDKVI +DQSPIG Sbjct: 744 FTCVTGVSGSGKSTLVNDTLYAAVARTLYRAH-EEPAGHEAIEGIEHFDKVISVDQSPIG 802 Query: 695 RTPRSNPATYTGVFTPVRELFAGVPESRARGYTPGRFSFNV----RGGRCEACQGDGVIK 750 RTPRSNPATYTG+FTP+REL A VP +R RGY PGRFSFNV GGRCEACQGDG++K Sbjct: 803 RTPRSNPATYTGLFTPIRELMAEVPMARERGYGPGRFSFNVSQSSGGGRCEACQGDGMVK 862 Query: 751 VEMHFLPDIYVPCDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKL 810 VEMHFLPD+YVPCD C G RYNRETLE+ YKGK I ++LD+T+E A EFF AVP +ARKL Sbjct: 863 VEMHFLPDVYVPCDVCVGHRYNRETLEVLYKGKNIAQILDLTVEVAHEFFKAVPTIARKL 922 Query: 811 QTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQ 870 +TL+DVGL+YIRLGQSATTLSGGEAQRVKLA ELSKR TG+TLYILDEPTTGLHFADI Sbjct: 923 RTLLDVGLSYIRLGQSATTLSGGEAQRVKLALELSKRDTGRTLYILDEPTTGLHFADIDL 982 Query: 871 LLDVLHKLRDQGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEAS 930 LL VLH+LRD GNTIVVIEHNLDVIKTADW++D+GPEGG+GGG+++ GTPE +A AS Sbjct: 983 LLKVLHQLRDAGNTIVVIEHNLDVIKTADWLIDMGPEGGAGGGQVVGIGTPEDLAANPAS 1042 Query: 931 HTARFLKPML 940 HT +LK +L Sbjct: 1043 HTGHYLKRLL 1052 >UniRef50_Q9WYV0 UvrABC system protein A n=8 Tax=Bacteria RepID=UVRA_THEMA Length = 916 Score = 1237 bits (3200), Expect = 0.0, Method: Composition-based stats. Identities = 507/945 (53%), Positives = 665/945 (70%), Gaps = 34/945 (3%) Query: 1 MDKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAY 60 M++I V+GAR HNLKNI + IP+++L+V+TG+SGSGKSSLA DT+YAEGQRRY+ESLS Y Sbjct: 1 MNEIVVKGARVHNLKNITVRIPKNRLVVITGVSGSGKSSLAMDTIYAEGQRRYLESLSTY 60 Query: 61 ARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRC 120 ARQFL ++KPDVD IEGLSPAI+I+QK+ SHNPRSTVGT+TEI+DYLR+L+AR+G+ C Sbjct: 61 ARQFLGNLKKPDVDEIEGLSPAIAIDQKTVSHNPRSTVGTVTEIYDYLRVLYARIGKAHC 120 Query: 121 PDHDVPLAAQTVSQMVDNVL-SQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARI 179 P+ PL +++ +++ ++ S EG R+ +LAP+ E+KG K +E S+G+ R I Sbjct: 121 PECGRPLEKKSIDEILQDLFNSFKEGSRIYILAPVATEKKGTFKKEIEEFISKGFARIEI 180 Query: 180 DGEVCDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVADMDD 239 DGE+ L + P+L+ K+HT+++VVDR + R+ +S E A+ G + ++D Sbjct: 181 DGEIYRLEEVPELDKNKRHTVKLVVDRLILETRNEHRILDSLELAMREGKGFVEIRNVDT 240 Query: 240 PKAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPE 299 E +FS N CP+CG E+ P+LFSFN+P GACP C GLG DP VI + E Sbjct: 241 --GESKIFSENLMCPVCGIGFPEITPKLFSFNSPYGACPNCHGLGFTFEVDPSLVI-DEE 297 Query: 300 LSLAGGAIRG--WDRRNFYYFQMLKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKENIE 357 S+ GAI WDRR + + + P+ L +V + +LYG Sbjct: 298 KSVLEGAIIPYRWDRRLSRW---VAREIEKRGVSPHLPFKDLPEDVKEFILYGDD----- 349 Query: 358 FKYMNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAK-FISNRPCASCEGTRLRR 416 FEGV+ ++R ++ETES ++E L K FI R C+ C G RL R Sbjct: 350 ---------------RFEGVVPKVQRWHRETESPEMKEWLEKNFIVQRTCSVCGGRRLNR 394 Query: 417 EARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNVGLN 476 EA V + + +++SI +EF NL L + +I ++LKEI RL+FLV+VGL Sbjct: 395 EALSVKINGLNIHEFTELSISEELEFLKNLNLTEREREIVGELLKEIEKRLEFLVDVGLE 454 Query: 477 YLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRD 536 YLTLSRSA TLSGGE+QRIRLA+QIG+GL GV+YVLDEP+IGLH RD ERL+ TL LRD Sbjct: 455 YLTLSRSATTLSGGESQRIRLATQIGSGLTGVIYVLDEPTIGLHPRDTERLIKTLKKLRD 514 Query: 537 LGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPES-LTGQYMSGK 595 LGNTVIVVEHDE+ IR ADH+IDIGPG G +GG VV +G ++ ++ P+S LTG+Y+SGK Sbjct: 515 LGNTVIVVEHDEEVIRNADHIIDIGPGGGTNGGRVVFQGTVDELLKNPDSSLTGEYLSGK 574 Query: 596 RKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLF 655 RKI V K R P LK+ G R NNLK++ + +P+G+F C+TGVSGSGKS+L+ +TL+ Sbjct: 575 RKITVNKTRR--LPYASLKIKGVRHNNLKNIDVEIPLGVFVCVTGVSGSGKSSLVMETLY 632 Query: 656 PIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELF 715 P L+ + + I+G E+ DK+I IDQSPIGRTPRSNPATYT VF +R LF Sbjct: 633 PALMNLLHKTKLP-AGEFDSIEGHENIDKMIAIDQSPIGRTPRSNPATYTKVFDEIRSLF 691 Query: 716 AGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRET 775 A P ++ARGY RFSFN++GGRCEACQG G +K+EM FLPD+YV CD CKGKRYNRET Sbjct: 692 AMTPAAKARGYNKSRFSFNLKGGRCEACQGQGYVKIEMLFLPDVYVECDVCKGKRYNRET 751 Query: 776 LEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEA 835 LEI YKGK I ++LDMT++EA EFF +P++ R LQ L DVGL Y++LGQ ATTLSGGEA Sbjct: 752 LEITYKGKNISDILDMTVDEALEFFKNIPSIKRTLQVLHDVGLGYVKLGQPATTLSGGEA 811 Query: 836 QRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVI 895 QR+KLA EL KR TG+TLYILDEPT GLHF D+++L++VLH+L D+GNT++VIEHNLDVI Sbjct: 812 QRIKLASELRKRDTGRTLYILDEPTVGLHFEDVRKLVEVLHRLVDRGNTVIVIEHNLDVI 871 Query: 896 KTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLKPML 940 K AD I+DLGPEGG GG I+ +GTPE +A+ S+T RFLK +L Sbjct: 872 KNADHIIDLGPEGGKEGGYIVATGTPEEIAKNPHSYTGRFLKNVL 916 >UniRef50_A2C5J2 Excinuclease ABC, A subunit, ATP/GTP-binding site motif A (P-loop):ABC transporter n=8 Tax=cellular organisms RepID=A2C5J2_PROM1 Length = 980 Score = 1232 bits (3187), Expect = 0.0, Method: Composition-based stats. Identities = 524/958 (54%), Positives = 689/958 (71%), Gaps = 23/958 (2%) Query: 2 DKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYA 61 D I +RGAR HNLKN++L IPR++L+V TG+SGSGKSSLAFDT++AEGQRRYVESLSAYA Sbjct: 21 DLITIRGARQHNLKNVDLSIPRNQLVVFTGVSGSGKSSLAFDTIFAEGQRRYVESLSAYA 80 Query: 62 RQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCP 121 RQFL ++KPDVD IEGLSPAISI+QKSTSHNPRSTVGT+TEI DY RLLF R GEP CP Sbjct: 81 RQFLGQVDKPDVDSIEGLSPAISIDQKSTSHNPRSTVGTVTEIQDYFRLLFGRAGEPHCP 140 Query: 122 DHDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARIDG 181 + P+ Q++ +MVD + + PEG R LLAP+++ +KG H+K L LA++G++R RI+ Sbjct: 141 ECSRPIKPQSIDEMVDQIKTLPEGSRYQLLAPVVRGKKGTHSKLLSGLAAEGFVRVRINK 200 Query: 182 EVCDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVADMDDPK 241 EV +L+D +L+ + H+IEVVVDR R+ + +RL +S T L+ G A+V + Sbjct: 201 EVRELADNIELDKNQVHSIEVVVDRLIAREGIEERLTDSLSTTLKRGDGLAIVEVVPKKN 260 Query: 242 AE-------ELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRV 294 E E LFS NFACP+ G + EL PRLFSFN+P GACP C GLG + F +RV Sbjct: 261 EELPKGIEKERLFSENFACPVHGAVIEELSPRLFSFNSPYGACPDCHGLGHLKKFTCERV 320 Query: 295 IQNPELSLAGGAIRGW-DRRNFYYFQMLKSLADHYKFDVEAPWGSLSANVHKVVLYGSGK 353 + +P L + A+ W D+ N YYF +L S+ + + F+++ PW L ++L GS K Sbjct: 321 VPDPSLPVYA-AVAPWSDKDNSYYFSLLFSVGEAFGFEIKTPWKDLKEEQKNILLNGS-K 378 Query: 354 ENIEFKYMNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGTR 413 E I K + S + PFEG+L +ER+ ++ AVR++L K++ PCASC G R Sbjct: 379 EPILIKVDSRYKQDSGFKRPFEGILPILERQLQDANGEAVRQKLEKYLELVPCASCHGKR 438 Query: 414 LRREARHVYVENTPLPAISDMSIGHAMEFFNNL-----------KLAGQRAKIAEKILKE 462 LR EA V + + ++ S+ +E L L+ ++ KI E +LKE Sbjct: 439 LRPEALAVKLGPFAITDLTSSSVSTTLENVEELMGIETTNNSKQLLSNKQKKIGELVLKE 498 Query: 463 IGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQR 522 I RL+FL++VGL+YLTL R A TLSGGEAQRIRLA+QIGAGL GV+YVLDEPSIGLHQR Sbjct: 499 IRLRLQFLLDVGLDYLTLDRPAMTLSGGEAQRIRLATQIGAGLTGVLYVLDEPSIGLHQR 558 Query: 523 DNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMA 582 DN+RLL TL LRDLGNT++VVEHDED IR+ADH++DIGPGAGVHGGE++A+G L+ ++ Sbjct: 559 DNDRLLSTLKKLRDLGNTLVVVEHDEDTIRSADHLVDIGPGAGVHGGEIIAQGSLDNLLT 618 Query: 583 VPESLTGQYMSGKRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVS 642 +SLTG Y+SG+ I P R + K L+L NNLK+V++ P+G +TGVS Sbjct: 619 AKKSLTGAYLSGRSSIPTPTSRRDSVQRK-LRLIDCNKNNLKNVSVDFPLGRLVAVTGVS 677 Query: 643 GSGKSTLINDTLFPIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPA 702 GSGKSTLIN+ L P L G + P ++++G++ DKVI IDQSPIGRTPRSN A Sbjct: 678 GSGKSTLINELLHPALNHSL-GLKVPFPKGLKELKGIKSIDKVIVIDQSPIGRTPRSNTA 736 Query: 703 TYTGVFTPVRELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVP 762 TYTG F P+R+LFA E++ARGY G+FSFNV+GGRCEAC+G GV +EM+FLPD+YV Sbjct: 737 TYTGAFDPIRQLFATSVEAKARGYQAGQFSFNVKGGRCEACRGQGVNVIEMNFLPDVYVQ 796 Query: 763 CDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIR 822 CD CKG R+NRETL++KYK +I +VL+MT+E+A + F A+P A +L+TL+DVGL YI+ Sbjct: 797 CDVCKGARFNRETLQVKYKNYSISDVLEMTVEQAVDVFSAIPQAADRLRTLLDVGLGYIK 856 Query: 823 LGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQG 882 LGQ A TLSGGEAQRVKLA ELS+R TG+TLY++DEPTTGL F D+ +L+DV+ +L D+G Sbjct: 857 LGQPAPTLSGGEAQRVKLATELSRRATGKTLYLIDEPTTGLSFYDVHKLMDVIQRLVDKG 916 Query: 883 NTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLKPML 940 N+I+VIEHNLDVI+ +DW++D+GPEGG+ GGEI+ GTPE VA + SHT +LK +L Sbjct: 917 NSIIVIEHNLDVIRCSDWVIDMGPEGGNRGGEIIAMGTPEEVATNKNSHTGGYLKKVL 974 Score = 185 bits (469), Expect = 9e-45, Method: Composition-based stats. Identities = 70/201 (34%), Positives = 111/201 (55%), Gaps = 15/201 (7%) Query: 403 NRPCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKE 462 C C+G R RE V +N + + +M++ A++ F+ + A Sbjct: 794 YVQCDVCKGARFNRETLQVKYKNYSISDVLEMTVEQAVDVFSAIPQAA------------ 841 Query: 463 IGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVG-VMYVLDEPSIGLHQ 521 DRL+ L++VGL Y+ L + A TLSGGEAQR++LA+++ G +Y++DEP+ GL Sbjct: 842 --DRLRTLLDVGLGYIKLGQPAPTLSGGEAQRVKLATELSRRATGKTLYLIDEPTTGLSF 899 Query: 522 RDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIM 581 D +L+ + L D GN++IV+EH+ D IR +D VID+GP G GGE++A G E + Sbjct: 900 YDVHKLMDVIQRLVDKGNSIIVIEHNLDVIRCSDWVIDMGPEGGNRGGEIIAMGTPEEVA 959 Query: 582 AVPESLTGQYMSGKRKIEVPK 602 S TG Y+ ++ + Sbjct: 960 TNKNSHTGGYLKKVLEMHPSR 980 Score = 99.2 bits (246), Expect = 7e-19, Method: Composition-based stats. Identities = 41/121 (33%), Positives = 58/121 (47%), Gaps = 6/121 (4%) Query: 607 ANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGAT 666 ++ E ++ + GAR +NLK+V L++P TGVSGSGKS+L DT+F QR+ + Sbjct: 17 SSTEDLITIRGARQHNLKNVDLSIPRNQLVVFTGVSGSGKSSLAFDTIFAEGQRRYVESL 76 Query: 667 IAEPAPYR------DIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPE 720 A + D+ +E I IDQ PRS T T + R LF E Sbjct: 77 SAYARQFLGQVDKPDVDSIEGLSPAISIDQKSTSHNPRSTVGTVTEIQDYFRLLFGRAGE 136 Query: 721 S 721 Sbjct: 137 P 137 >UniRef50_D0MK77 Excinuclease ABC, A subunit n=2 Tax=Bacteroidetes RepID=D0MK77_RHOM4 Length = 981 Score = 1230 bits (3184), Expect = 0.0, Method: Composition-based stats. Identities = 504/941 (53%), Positives = 667/941 (70%), Gaps = 8/941 (0%) Query: 2 DKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYA 61 D I +RGAR HNLKNI+L IPR++L+V+TGLSGSGKSSLAFDT+YAEGQRRY+ESLSAYA Sbjct: 3 DCIVIRGAREHNLKNIDLDIPRERLVVITGLSGSGKSSLAFDTIYAEGQRRYLESLSAYA 62 Query: 62 RQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCP 121 RQFL ++E+PDVD I+GLSP I+IEQK+ S NPRSTVGT+TE++D+LRLL+ARV Sbjct: 63 RQFLGMLERPDVDFIDGLSPVIAIEQKTVSQNPRSTVGTVTEVYDFLRLLYARVATAYSH 122 Query: 122 DHDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARIDG 181 P+ QT ++++++LS PEG RL++LAP+++ RKG + + E +A QG+ R R+DG Sbjct: 123 ISGKPMRRQTDDEIINHILSFPEGTRLLILAPVVRGRKGHYRELFEQIARQGFERVRVDG 182 Query: 182 EVCDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVADMD-DP 240 E+ +++ KL+ K H IEVVVDR VR D+ R+ +S + AL + GG + ++ D Sbjct: 183 ELREITPGMKLDRYKTHDIEVVVDRIVVRPDIRPRVHDSVQIALGMGGGVLIAHVLNPDG 242 Query: 241 KAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPEL 300 + +FS + CP G S + P FSFN+P GACP C+GLG + DPD VI +P Sbjct: 243 MGTDHVFSRHLYCPEDGVSYDDPSPNTFSFNSPYGACPACNGLGTRLEIDPDLVIPDPSK 302 Query: 301 SLAGGAIRGWDR-RNFYYFQMLKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKENIEFK 359 S+ G + R R+ + F L+++A Y FD + P G+L+ +V+L G+G E + Sbjct: 303 SINEGGLAPLGRPRDVWIFSQLRAVAAAYGFDFDTPLGALTEEQRRVLLEGAGDREFEIE 362 Query: 360 YMNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGTRLRREAR 419 Y + T RH F G+ + + S + R F+ C +C G RL+ E+ Sbjct: 363 YRF-KDRTLRYRHRFGGIYEYLHHLREHAGSVSQRRWAESFMREMTCQACGGARLKPESL 421 Query: 420 HVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLT 479 + + ++ M + F + L+ GQ+A IA ILKEI +RL FL+ VG+ YLT Sbjct: 422 AFRIGGKNIAELAHMDLVSLRRFLSELQFEGQKALIARPILKEILERLGFLIEVGVGYLT 481 Query: 480 LSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGN 539 L R A TLSGGE+QRIRLA+Q+G+ L GV+YVLDEPSIGLH RD+ RL+ L LRDLGN Sbjct: 482 LDRPARTLSGGESQRIRLAAQLGSQLTGVLYVLDEPSIGLHPRDHHRLIDALKLLRDLGN 541 Query: 540 TVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLE--AIMAVPESLTGQYMSGKRK 597 +++VVEHD + I AAD+VID+GPGAG HGG VVA GP + + SLT Y+ G R Sbjct: 542 SILVVEHDREMIEAADYVIDLGPGAGEHGGHVVAAGPPDRLEVRDGHVSLTAAYLKGARY 601 Query: 598 IEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPI 657 I VP++R N +++ L GARG+NLK L LP+G F C+TGVSGSGKS+LIN TL+PI Sbjct: 602 IPVPRERRTGNGHRLV-LYGARGHNLKGDPLVLPLGTFICVTGVSGSGKSSLINQTLYPI 660 Query: 658 AQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAG 717 R + A + P PY I+GLEH DKVIDIDQ PIGRTPRSNPATYTG+F+ +R+LFA Sbjct: 661 LARHFHNARLV-PLPYERIEGLEHLDKVIDIDQKPIGRTPRSNPATYTGLFSHIRDLFAR 719 Query: 718 VPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLE 777 +PE++ RGY PGRFSFNV+GGRCE C+G GV+K+EM+FLPD++V C+ C+G+RYN ETLE Sbjct: 720 LPEAQLRGYKPGRFSFNVKGGRCETCKGAGVVKLEMNFLPDVHVTCETCRGRRYNAETLE 779 Query: 778 IKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQR 837 ++Y+GK+I +VL+MT++EA FF+ +P +ARKL+TL VGL YIRLGQ ATTLSGGEAQR Sbjct: 780 VRYRGKSIADVLEMTVDEALAFFENMPRIARKLRTLQAVGLGYIRLGQPATTLSGGEAQR 839 Query: 838 VKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKT 897 +KLARELS+ GTG TLYILDEPTTGLHF DI+ LL VL L +GNT++VIEHNLDVIK Sbjct: 840 IKLARELSRPGTGNTLYILDEPTTGLHFEDIRHLLAVLRALVRKGNTVLVIEHNLDVIKV 899 Query: 898 ADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLKP 938 AD +++LGPEGG GG IL +GTPE +A + +HT RFL+ Sbjct: 900 ADHVIELGPEGGDAGGHILFAGTPEELAA-QDTHTGRFLRK 939 Score = 98.9 bits (245), Expect = 8e-19, Method: Composition-based stats. Identities = 38/118 (32%), Positives = 62/118 (52%), Gaps = 6/118 (5%) Query: 610 EKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAE 669 + + + GAR +NLK++ L +P ITG+SGSGKS+L DT++ QR+ + A Sbjct: 2 QDCIVIRGAREHNLKNIDLDIPRERLVVITGLSGSGKSSLAFDTIYAEGQRRYLESLSAY 61 Query: 670 PAPYR------DIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPES 721 + D+ ++ VI I+Q + + PRS T T V+ +R L+A V + Sbjct: 62 ARQFLGMLERPDVDFIDGLSPVIAIEQKTVSQNPRSTVGTVTEVYDFLRLLYARVATA 119 >UniRef50_A6DP81 Excinuclease ABC, A subunit n=3 Tax=Bacteria RepID=A6DP81_9BACT Length = 939 Score = 1195 bits (3091), Expect = 0.0, Method: Composition-based stats. Identities = 504/945 (53%), Positives = 655/945 (69%), Gaps = 12/945 (1%) Query: 1 MDKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAY 60 M+ I ++GAR HNLKN+++ IPR+KL+VVTGLSGSGKSSLAFDTLYAEGQRRYVESLS+Y Sbjct: 1 MEDIFIKGARHHNLKNVDVRIPRNKLVVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSSY 60 Query: 61 ARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRC 120 ARQF+ MEKP+V+ I GLSPAI+IEQ+ +PRS V T TEI+DYLRL++A VG+ C Sbjct: 61 ARQFMDQMEKPEVEQITGLSPAIAIEQRGGVGSPRSIVATSTEIYDYLRLMYAHVGKRHC 120 Query: 121 PDHDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARID 180 P + +Q+ +V S PE K++++L+P+++ RKGEH + E G+ R R+D Sbjct: 121 PQCGERVQSQSAEAIVRKAQSFPEEKKMLILSPLVEGRKGEHKEVFEKAVRDGFARVRVD 180 Query: 181 GEVCDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVADMDD- 239 GE+C L D P L+ KH +++VVDR K + RL +S ETAL GG+ + ++ Sbjct: 181 GEMCRLEDVPNLDKNFKHNVDLVVDRIKTGSK-SSRLTDSVETALTYGGGSIIFQVENEQ 239 Query: 240 PKAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPE 299 + +E S + AC C S EL+ R FSFN+P GAC C GLG Q D D ++ + Sbjct: 240 GEWDEHKLSEHLACDACNISFSELQARDFSFNSPYGACGECHGLGSVQTLDIDMIVPDKR 299 Query: 300 LSLAGGAIRGWDRR----NFYYFQMLKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKEN 355 + A W + FYY +L+S+ Y F++ + LS V+LYG+GK Sbjct: 300 KPVKD-AFPFWKKGPRRLVFYYKNLLESVGKAYDFELTTRFEDLSEKQRDVLLYGTGK-A 357 Query: 356 IEFKYMNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGTRLR 415 I Y N G PFEGV N+ RR ET S RE++ + R C SC G RL+ Sbjct: 358 IRMVYKN-AGRWYDVNKPFEGVARNITRRMNETGSDRQREKILSLMVRRECGSCHGDRLK 416 Query: 416 REARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNVGL 475 E+ V V++ P+ MSI A EF NL IA ++ +EI RL FL VGL Sbjct: 417 PESLAVTVKDMPINHFLRMSIADAAEFIQNLDFNETEKVIAGEVSREIDSRLGFLNAVGL 476 Query: 476 NYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLR 535 NYL L+R + +LSGGEAQRIRLA+Q+GAGLVGV+Y+LDEPSIGLHQRDN+RLL TL HLR Sbjct: 477 NYLNLNRESSSLSGGEAQRIRLATQLGAGLVGVLYILDEPSIGLHQRDNDRLLATLEHLR 536 Query: 536 DLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGK 595 LGNTV+VVEHD D I AD++ID+GP AG GGE+V GP + IM ++LTGQYMSGK Sbjct: 537 GLGNTVVVVEHDTDTILRADYLIDMGPMAGRLGGEIVFAGPPKEIMKA-DTLTGQYMSGK 595 Query: 596 RKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLF 655 ++I +P KR N K +K+ A NNL+ V +++P+G F C+TGVSGSGKSTL+++ L Sbjct: 596 KEIAIPAKREKGNG-KSIKIKAAAENNLQKVNVSVPLGKFVCVTGVSGSGKSTLVHEILK 654 Query: 656 PIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELF 715 + L G P R ++GLE DK I I QSPIG+TPRSNPATYTG F +R L+ Sbjct: 655 KSINKHL-GIGRERPGKVRSVEGLEEIDKQIVITQSPIGKTPRSNPATYTGAFDQIRTLY 713 Query: 716 AGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRET 775 A P+++AR Y PGRFSFNV+GGRCE C+GDG K+EM+FLPD++V C+ C+G+RYN ET Sbjct: 714 ASTPDAKARAYKPGRFSFNVKGGRCEECKGDGYRKIEMNFLPDVFVECEVCRGRRYNTET 773 Query: 776 LEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEA 835 L + YKG++I +VL+MTI+EA EFFD VP L + L TL +VGL Y+ +GQ+ATTLSGGEA Sbjct: 774 LSVLYKGRSIADVLEMTIDEAYEFFDKVPKLKKILGTLEEVGLGYLHMGQAATTLSGGEA 833 Query: 836 QRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVI 895 QRVKLA EL + G T+YILDEPTTGLH ADI +LL VLH+LRD GN+++VIEHNLDVI Sbjct: 834 QRVKLASELCRIPRGHTMYILDEPTTGLHIADIDRLLQVLHRLRDAGNSLIVIEHNLDVI 893 Query: 896 KTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLKPML 940 KTADWI+D+GPEGG+GGG+++VSGTPE VA+C AS T ++LKP+L Sbjct: 894 KTADWIIDMGPEGGAGGGQVMVSGTPEKVAKCAASFTGQYLKPIL 938 Score = 187 bits (475), Expect = 2e-45, Method: Composition-based stats. Identities = 89/319 (27%), Positives = 132/319 (41%), Gaps = 47/319 (14%) Query: 307 IRGWDRRNFYYFQMLKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKENIEFKYMNDRGD 366 + G + + + KS+ H E P S + + + I Sbjct: 640 VSGSGKSTLVHEILKKSINKHLGIGRERPGKVRSVEGLEEI-----DKQIVITQSPIGKT 694 Query: 367 TSIRRHPFEGVLHNMERRYKET-------------------------ESSAVREELAKFI 401 + G + Y T + R+ F+ Sbjct: 695 PRSNPATYTGAFDQIRTLYASTPDAKARAYKPGRFSFNVKGGRCEECKGDGYRKIEMNFL 754 Query: 402 --SNRPCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKI 459 C C G R E V + + + +M+I A EFF+ + Sbjct: 755 PDVFVECEVCRGRRYNTETLSVLYKGRSIADVLEMTIDEAYEFFDKVP------------ 802 Query: 460 LKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVG-VMYVLDEPSIG 518 ++ L L VGL YL + ++A TLSGGEAQR++LAS++ G MY+LDEP+ G Sbjct: 803 --KLKKILGTLEEVGLGYLHMGQAATTLSGGEAQRVKLASELCRIPRGHTMYILDEPTTG 860 Query: 519 LHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLE 578 LH D +RLL L LRD GN++IV+EH+ D I+ AD +ID+GP G GG+V+ G E Sbjct: 861 LHIADIDRLLQVLHRLRDAGNSLIVIEHNLDVIKTADWIIDMGPEGGAGGGQVMVSGTPE 920 Query: 579 AIMAVPESLTGQYMSGKRK 597 + S TGQY+ K Sbjct: 921 KVAKCAASFTGQYLKPILK 939 >UniRef50_Q1MP46 Excinuclease ABC, A subunit n=2 Tax=Bacteria RepID=Q1MP46_LAWIP Length = 957 Score = 1184 bits (3063), Expect = 0.0, Method: Composition-based stats. Identities = 456/942 (48%), Positives = 627/942 (66%), Gaps = 12/942 (1%) Query: 2 DKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYA 61 I + GAR HNLKNI + IPR+KL+V+ G SGSGKS+LAFD +YAEGQRRY+ESLS YA Sbjct: 3 KCIHIEGARQHNLKNITIDIPREKLVVICGPSGSGKSTLAFDIVYAEGQRRYIESLSTYA 62 Query: 62 RQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCP 121 RQFL M+KPD+D IEGLSPAIS+EQ++T NPRSTVGT TEI+D+LR+ +AR+G+ C Sbjct: 63 RQFLPQMDKPDIDKIEGLSPAISLEQQTTGRNPRSTVGTTTEIYDFLRVFYARLGKMYCT 122 Query: 122 DHDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARIDG 181 P+ A++V +++ ++L+ PEG +++LL+P+++ +KG H + L+ L + G++R RIDG Sbjct: 123 GCSKPIEARSVDEIIADILALPEGTKIILLSPLVELQKGTHIEKLKKLKADGFVRVRIDG 182 Query: 182 EVCDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVADM---D 238 + + + P L+ KKHTIE+VVDR +++D+ RLA+S E AL GG ++ ++ D Sbjct: 183 ILYTIDEAPSLDKNKKHTIELVVDRLIIKNDIRGRLADSVELALRYGGGHVIIHEISISD 242 Query: 239 DPKAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNP 298 + K + + + C C S L P+ FSFN+P GACP C GLG +YF+P + N Sbjct: 243 EKKGIDTIHATESVCTSCRISFPTLTPQFFSFNSPQGACPRCSGLGTIEYFEPLLIAPNR 302 Query: 299 ELSLAGGAIRGWDRRNF--YYFQMLKSLADHYKFDVEAPWGSLSANVHKVVLYGS--GKE 354 LSL AI W Y LK L Y F++ P +A ++ YG Sbjct: 303 GLSLNTKAILPWANPKIFHRYESSLKELGRKYGFNLSTPLSEFNAEALDILFYGEQINDT 362 Query: 355 NIEFKYMNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGTRL 414 + +I + G++ +E+ + R+ L++++ N C C G RL Sbjct: 363 PSQLSKSKKTVQKTIDNQRWSGIIPILEQSLQ--YGDMWRDILSRYLQNMDCPVCHGARL 420 Query: 415 RREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNVG 474 R EA V ++ + + + + + + + +G+ A IAE +LKE+ RLKF++NVG Sbjct: 421 RTEALAVQIQGVSIQELCTIPVSKTLNWLQQVIFSGRHAIIAEPLLKELIHRLKFMINVG 480 Query: 475 LNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHL 534 L+YL+L R+ TLSGGEAQRIRLASQ+G+GLVGV YVLDEPSIGLH RDNERL+ TL L Sbjct: 481 LDYLSLGRTMTTLSGGEAQRIRLASQLGSGLVGVTYVLDEPSIGLHPRDNERLVSTLRSL 540 Query: 535 RDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSG 594 + GNTV+VVEHDE IR +D +I++GPG+G+HGGE V +G ++ +LT +YM G Sbjct: 541 QKRGNTVLVVEHDEATIRESDMIIELGPGSGLHGGEKVFQGSFRQLINESNTLTAKYMRG 600 Query: 595 KRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTL 654 I +P KR P+ L L G +NLK++T + P+G TC+TGVSGSGKS+L+ DTL Sbjct: 601 DLTIPIPDKRR--QPKNYLTLQGITTHNLKNITCSFPLGTLTCVTGVSGSGKSSLVVDTL 658 Query: 655 FPIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVREL 714 + +G + +P IQG+E ++ I IDQ+PIG+TPRSNPATYT +F +R + Sbjct: 659 YKHLA-LAHGIRVDQPGIIHGIQGIEKVERTISIDQTPIGKTPRSNPATYTKIFDEIRNI 717 Query: 715 FAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRE 774 FA P+++ RGY PGRFSFNV GGRCE C+GDG ++VEMHFLPDIYV CD C GKRYN E Sbjct: 718 FAMTPDAKKRGYQPGRFSFNVPGGRCETCKGDGQLRVEMHFLPDIYVTCDICNGKRYNHE 777 Query: 775 TLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGE 834 TLE++Y+G I EVL + + EAR+FF P L RKL L +VGL Y++LGQ ATTLSGGE Sbjct: 778 TLEVRYRGLNISEVLGLAVHEARKFFTNYPILERKLAILEEVGLDYLQLGQPATTLSGGE 837 Query: 835 AQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDV 894 AQR+K++REL KR TLYILDEPTTGLH ++ +L+ VL +L D+ T+VVIEHN DV Sbjct: 838 AQRIKISRELGKRSLPGTLYILDEPTTGLHMHEVGKLITVLQQLVDKKATVVVIEHNKDV 897 Query: 895 IKTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFL 936 I +D+++DLGP GG GG I+ SGTPE + + S T +FL Sbjct: 898 ILASDYVIDLGPGGGENGGHIVASGTPEEIMQDPQSITGKFL 939 Score = 163 bits (412), Expect = 4e-38, Method: Composition-based stats. Identities = 64/189 (33%), Positives = 107/189 (56%), Gaps = 15/189 (7%) Query: 763 CDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAV--------------PALAR 808 C C G R E L ++ +G +I E+ + + + + V L Sbjct: 412 CPVCHGARLRTEALAVQIQGVSIQELCTIPVSKTLNWLQQVIFSGRHAIIAEPLLKELIH 471 Query: 809 KLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADI 868 +L+ +++VGL Y+ LG++ TTLSGGEAQR++LA +L G T Y+LDEP+ GLH D Sbjct: 472 RLKFMINVGLDYLSLGRTMTTLSGGEAQRIRLASQLGSGLVGVT-YVLDEPSIGLHPRDN 530 Query: 869 QQLLDVLHKLRDQGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECE 928 ++L+ L L+ +GNT++V+EH+ I+ +D I++LGP G GGE + G+ + Sbjct: 531 ERLVSTLRSLQKRGNTVLVVEHDEATIRESDMIIELGPGSGLHGGEKVFQGSFRQLINES 590 Query: 929 ASHTARFLK 937 + TA++++ Sbjct: 591 NTLTAKYMR 599 >UniRef50_Q30YG3 Excinuclease ABC subunit A n=3 Tax=Bacteria RepID=Q30YG3_DESDG Length = 926 Score = 1183 bits (3061), Expect = 0.0, Method: Composition-based stats. Identities = 469/936 (50%), Positives = 628/936 (67%), Gaps = 28/936 (2%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 63 I + GAR HNLKN+ L IPRD+L+VV G SGSGKS+LAFD +YAEGQRRYVESLSAYARQ Sbjct: 6 IHIEGARQHNLKNLTLDIPRDELVVVCGPSGSGKSTLAFDLVYAEGQRRYVESLSAYARQ 65 Query: 64 FLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCPDH 123 FL M+KPDVD IEGLSPAIS+EQ+STS NPRSTVGT+TE++D+LR+ +AR+G CP Sbjct: 66 FLPQMDKPDVDKIEGLSPAISLEQQSTSRNPRSTVGTVTEVYDFLRVFYARLGMMYCPKC 125 Query: 124 DVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARIDGEV 183 P+AA+ +++ ++LS +G + M++AP+++ +KG H L+ L +QG++R R++GEV Sbjct: 126 GKPIAARAADEIIADILSMEQGTKFMVMAPLVEHQKGTHADRLKRLKAQGFVRIRLNGEV 185 Query: 184 CDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVADMDDPKAE 243 L + P LE KKH+I++VVDR ++D + RLA+S E AL G +V+ P Sbjct: 186 MTLDEVPALEKNKKHSIDLVVDRLVLKDGIRGRLADSVELALRFGEGRLIVSI---PGGA 242 Query: 244 ELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPELSLA 303 E + S CP C S+ L P+LFSFN+P GACP C G+G YF+P+ + N LSL Sbjct: 243 EQVHSTESVCPTCKLSLPPLSPQLFSFNSPQGACPRCSGIGSIDYFEPNLLAPNKGLSLV 302 Query: 304 GGAIRGWDRRN--FYYFQMLKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKENIEFKYM 361 G + W Y L++L F + P+ S + +G Sbjct: 303 SGGLLPWKNPKVFERYKPALEALGKELGFAADTPFREYSEKAWNALFHGE---------- 352 Query: 362 NDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGTRLRREARHV 421 + + GV+ +ER + S R+EL+++ + PC +C+G RL+ EA V Sbjct: 353 --------KETGWPGVVLLLERGMQ--LGSQWRDELSRYRQSHPCPACDGARLKPEALAV 402 Query: 422 YVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTLS 481 V++ + +SI A+E+ +A IAE +LKE+ RL F+ NVGL+Y++L Sbjct: 403 RVDDLNISQFCSLSITRALEWLRGRDFRQSQAVIAEPLLKELTHRLGFMENVGLDYISLG 462 Query: 482 RSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTV 541 R+ TLSGGEAQRIRLASQ+G+GLVGV YVLDEPSIGLH +DNERL+ TL L+ GNTV Sbjct: 463 RNMSTLSGGEAQRIRLASQLGSGLVGVTYVLDEPSIGLHPKDNERLIRTLRSLQKRGNTV 522 Query: 542 IVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEVP 601 +VVEHDE I AD V+++GPG+G+ GGE+V G ++++++ +SLT +Y+ G+ I +P Sbjct: 523 LVVEHDEATILEADTVVELGPGSGMLGGEIVFNGSVKSLLSDSDSLTARYLRGEMTIPLP 582 Query: 602 KKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQ 661 +KR + L G NNL+D+ +P+G TC+TG SGSGKS+L+ D+L+ Sbjct: 583 EKRR--QGSGSIVLRGVTTNNLQDIDCEIPLGALTCVTGPSGSGKSSLVVDSLYKHIALH 640 Query: 662 LNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPES 721 + P R I GLE+ ++++ IDQ+PIGRTPRSNPATYT +F +R +FA P++ Sbjct: 641 -QSIKVDSPGQIRGIDGLENIERLVAIDQTPIGRTPRSNPATYTKIFDEIRNIFAMTPDA 699 Query: 722 RARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKYK 781 R RGY PGRFSFNVRGGRCEAC GDG I+VEMHFLPDIYV CD C GKRYN ETLE++YK Sbjct: 700 RKRGYKPGRFSFNVRGGRCEACGGDGQIRVEMHFLPDIYVTCDVCGGKRYNHETLEVRYK 759 Query: 782 GKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLA 841 G I +VL MT+ +A+ FF+ PAL R+L L DVGL Y+RLGQ ATTLSGGEAQR+K++ Sbjct: 760 GMNIADVLGMTVRQAKAFFENYPALERRLAVLEDVGLEYLRLGQPATTLSGGEAQRIKIS 819 Query: 842 RELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADWI 901 REL KR TLYILDEPTTGLH ++ +L+ VLH+L D+G T+VVIEHN DVI AD + Sbjct: 820 RELGKRSLPGTLYILDEPTTGLHMHEVGKLIRVLHQLVDRGATVVVIEHNTDVIMAADTV 879 Query: 902 VDLGPEGGSGGGEILVSGTPETVAECEASHTARFLK 937 +DLGP GG GG I+ SGTPE + AS T FLK Sbjct: 880 IDLGPGGGEYGGRIVSSGTPEEIMADPASVTGSFLK 915 Score = 176 bits (447), Expect = 3e-42, Method: Composition-based stats. Identities = 76/194 (39%), Positives = 106/194 (54%), Gaps = 15/194 (7%) Query: 403 NRPCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKE 462 C C G R E V + + + M++ A FF N Sbjct: 738 YVTCDVCGGKRYNHETLEVRYKGMNIADVLGMTVRQAKAFFENYP--------------A 783 Query: 463 IGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIG-AGLVGVMYVLDEPSIGLHQ 521 + RL L +VGL YL L + A TLSGGEAQRI+++ ++G L G +Y+LDEP+ GLH Sbjct: 784 LERRLAVLEDVGLEYLRLGQPATTLSGGEAQRIKISRELGKRSLPGTLYILDEPTTGLHM 843 Query: 522 RDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIM 581 + +L+ L L D G TV+V+EH+ D I AAD VID+GPG G +GG +V+ G E IM Sbjct: 844 HEVGKLIRVLHQLVDRGATVVVIEHNTDVIMAADTVIDLGPGGGEYGGRIVSSGTPEEIM 903 Query: 582 AVPESLTGQYMSGK 595 A P S+TG ++ + Sbjct: 904 ADPASVTGSFLKHE 917 Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats. Identities = 43/116 (37%), Positives = 59/116 (50%), Gaps = 13/116 (11%) Query: 3 KIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLY---AEGQRRYVESLSA 59 I +RG T+NL++I+ IP L VTG SGSGKSSL D+LY A Q V+S Sbjct: 591 SIVLRGVTTNNLQDIDCEIPLGALTCVTGPSGSGKSSLVVDSLYKHIALHQSIKVDS-PG 649 Query: 60 YARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARV 115 R +D +E + ++I+Q PRS T T+I D +R +FA Sbjct: 650 QIRG---------IDGLENIERLVAIDQTPIGRTPRSNPATYTKIFDEIRNIFAMT 696 Score = 93.8 bits (232), Expect = 3e-17, Method: Composition-based stats. Identities = 35/116 (30%), Positives = 56/116 (48%), Gaps = 6/116 (5%) Query: 609 PEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIA 668 + + + GAR +NLK++TL +P + G SGSGKSTL D ++ QR+ + A Sbjct: 2 SKPCIHIEGARQHNLKNLTLDIPRDELVVVCGPSGSGKSTLAFDLVYAEGQRRYVESLSA 61 Query: 669 EPAPYR------DIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGV 718 + D+ +E I ++Q R PRS T T V+ +R +A + Sbjct: 62 YARQFLPQMDKPDVDKIEGLSPAISLEQQSTSRNPRSTVGTVTEVYDFLRVFYARL 117 >UniRef50_D1PT12 Excision endonuclease subunit UvrA n=3 Tax=Bacteria RepID=D1PT12_9BACT Length = 1003 Score = 1177 bits (3045), Expect = 0.0, Method: Composition-based stats. Identities = 471/936 (50%), Positives = 660/936 (70%), Gaps = 12/936 (1%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 63 I+V GAR HNLK I++ IPR+ L V+TGLSGSGKSSLAFDT++AEGQRRY+E+ SAYAR Sbjct: 75 IDVLGARVHNLKGIDVSIPRNSLTVITGLSGSGKSSLAFDTIFAEGQRRYIETFSAYARN 134 Query: 64 FLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCPDH 123 FL ME+PDV+ I GLSP ISIEQK+T+ NPRSTVGT TEI+DYLRLL+AR G Sbjct: 135 FLGNMERPDVEKITGLSPVISIEQKTTNKNPRSTVGTTTEIYDYLRLLYARAGTAYSYMS 194 Query: 124 DVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARIDGEV 183 + T +++D +LS +G + +LAP++++RKG + + +++ +GY+ R+DGEV Sbjct: 195 GEKMVKYTEEKVIDMILSDYDGHAIYILAPLVRQRKGHYRELFDSMRRKGYLYIRVDGEV 254 Query: 184 CDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVADMDDPKAE 243 ++ K++ K H IEVV+D+ KV+ +RL S +TA++ G VVA MD Sbjct: 255 KEIVRGMKVDRYKNHNIEVVIDKLKVQGKDDERLKHSVQTAMKQGDG--VVAVMDKESGA 312 Query: 244 ELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPELSLA 303 FS P+ G S E P +FSFN+P GACP C GLG D +VI N +LS+ Sbjct: 313 VRNFSKRLMDPVTGLSYGEPAPNIFSFNSPEGACPHCKGLGYVSVIDMKKVIPNDKLSIR 372 Query: 304 GGAIRGWDR-RNFYYFQMLKSLADHYKFDVEAPWGSLSANVHKVVLYGS-GKENIEFKYM 361 GAI + +N F L+++ ++Y+ D++ P+ + + ++ G+ I + + Sbjct: 373 EGAIAPLGKYKNQMIFWQLEAILNNYECDLKTPFKDIPQDAVDEIMNGTLETVRIPKEVV 432 Query: 362 NDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGTRLRREARHV 421 + D + F+GV+ + + +S+A ++ A+F+++ C C+G RL+RE+ Sbjct: 433 HTSSDYFV---TFDGVVKYLRTVMEADDSAASQKWAAQFLADAVCPECKGMRLKRESLSY 489 Query: 422 YVENTPLPAISDMSIGHAMEFFNNLK--LAGQRAKIAEKILKEIGDRLKFLVNVGLNYLT 479 + + + +S++ + E+ +++ L Q+ KIA +I+KE+ R+ FL+ VGL+YL Sbjct: 490 RIGDENISEVSNLDMTDLREWLAHVEEHLGKQQQKIAHEIVKELCTRVDFLLEVGLDYLA 549 Query: 480 LSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGN 539 L+R + TLSGGE+QRIRLA+QIG+ LV V+Y+LDEPSIGLHQRDN RL+ +L LRDLGN Sbjct: 550 LNRQSGTLSGGESQRIRLATQIGSQLVNVLYILDEPSIGLHQRDNHRLISSLKELRDLGN 609 Query: 540 TVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIE 599 TVIVVEHDED +RAAD +IDIGP AG GGEVV +G E ++ +++T QY++G+R+IE Sbjct: 610 TVIVVEHDEDMMRAADWIIDIGPRAGRKGGEVVFQGTPEEMLKT-QTITAQYLNGERQIE 668 Query: 600 VPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQ 659 +P+ R N K +++ GA GNNLK++ + P+G +TGVSGSGKSTL+N+TL PI Sbjct: 669 IPEHRRKGNG-KSIRIIGAHGNNLKNINVEFPLGKLIVVTGVSGSGKSTLVNETLQPILS 727 Query: 660 RQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVP 719 + ++ P PY +G+++ DKV+D+DQSPIGRTPRSNPATYTGVFT +R LF +P Sbjct: 728 QHFY-RSLKNPMPYEKAEGIDNIDKVVDVDQSPIGRTPRSNPATYTGVFTDIRNLFVNLP 786 Query: 720 ESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIK 779 E++ RGY PGRFSFNV+GGRCE C G+G +EM+FLP++ VPC+ C GKRYNRETLE++ Sbjct: 787 EAKIRGYKPGRFSFNVKGGRCETCGGNGYKTIEMNFLPNVMVPCEVCHGKRYNRETLEVR 846 Query: 780 YKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVK 839 +KGK+I +VLDMTI +A EFF+ VP + K++TL DVGL Y++LGQS+TTLSGGE+QRVK Sbjct: 847 FKGKSIADVLDMTINQAVEFFENVPTILPKIKTLQDVGLGYVKLGQSSTTLSGGESQRVK 906 Query: 840 LARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTAD 899 LA EL+KR TG+TLYILDEPTTGLHF DI+ L+DVL KL D+GNT+++IEHNLDVI+ AD Sbjct: 907 LATELAKRDTGKTLYILDEPTTGLHFEDIRILMDVLQKLVDRGNTVIIIEHNLDVIRLAD 966 Query: 900 WIVDLGPEGGSGGGEILVSGTPETVAECEASHTARF 935 I+D+GP GG GGGE+L +GTPE VA+ + T ++ Sbjct: 967 HIIDIGPLGGRGGGEVLTTGTPEEVAKSKKGFTPKY 1002 Score = 184 bits (468), Expect = 1e-44, Method: Composition-based stats. Identities = 76/190 (40%), Positives = 107/190 (56%), Gaps = 15/190 (7%) Query: 404 RPCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEI 463 PC C G R RE V + + + DM+I A+EFF N+ I Sbjct: 828 VPCEVCHGKRYNRETLEVRFKGKSIADVLDMTINQAVEFFENVPT--------------I 873 Query: 464 GDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVG-VMYVLDEPSIGLHQR 522 ++K L +VGL Y+ L +S+ TLSGGE+QR++LA+++ G +Y+LDEP+ GLH Sbjct: 874 LPKIKTLQDVGLGYVKLGQSSTTLSGGESQRVKLATELAKRDTGKTLYILDEPTTGLHFE 933 Query: 523 DNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMA 582 D L+ L L D GNTVI++EH+ D IR ADH+IDIGP G GGEV+ G E + Sbjct: 934 DIRILMDVLQKLVDRGNTVIIIEHNLDVIRLADHIIDIGPLGGRGGGEVLTTGTPEEVAK 993 Query: 583 VPESLTGQYM 592 + T +Y+ Sbjct: 994 SKKGFTPKYI 1003 Score = 112 bits (281), Expect = 5e-23, Method: Composition-based stats. Identities = 39/122 (31%), Positives = 59/122 (48%), Gaps = 7/122 (5%) Query: 2 DKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYA 61 I + GA +NLKNIN+ P KLIVVTG+SGSGKS+L +TL + + Sbjct: 679 KSIRIIGAHGNNLKNINVEFPLGKLIVVTGVSGSGKSTLVNETLQPILSQ-------HFY 731 Query: 62 RQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCP 121 R + M + I+ + + ++Q PRS T T + +R LF + E + Sbjct: 732 RSLKNPMPYEKAEGIDNIDKVVDVDQSPIGRTPRSNPATYTGVFTDIRNLFVNLPEAKIR 791 Query: 122 DH 123 + Sbjct: 792 GY 793 Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats. Identities = 38/126 (30%), Positives = 60/126 (47%), Gaps = 6/126 (4%) Query: 602 KKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQ 661 R + + GAR +NLK + +++P T ITG+SGSGKS+L DT+F QR+ Sbjct: 64 PSRGAGEDGSWIDVLGARVHNLKGIDVSIPRNSLTVITGLSGSGKSSLAFDTIFAEGQRR 123 Query: 662 LNGATIAEPAPYR------DIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELF 715 A + D++ + VI I+Q + PRS T T ++ +R L+ Sbjct: 124 YIETFSAYARNFLGNMERPDVEKITGLSPVISIEQKTTNKNPRSTVGTTTEIYDYLRLLY 183 Query: 716 AGVPES 721 A + Sbjct: 184 ARAGTA 189 >UniRef50_D2QY36 Excinuclease ABC, A subunit n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2QY36_9PLAN Length = 2373 Score = 1174 bits (3037), Expect = 0.0, Method: Composition-based stats. Identities = 513/1001 (51%), Positives = 686/1001 (68%), Gaps = 66/1001 (6%) Query: 3 KIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYAR 62 I ++GAR HNL++++LV+PR++LI +TG+SGSGKSSLAFDTL+AEGQRRYVESLS+YAR Sbjct: 5 DIVIQGAREHNLRDVSLVLPRNQLICLTGVSGSGKSSLAFDTLFAEGQRRYVESLSSYAR 64 Query: 63 QFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCPD 122 QFL M KPDVD I GLSP+ISI QKST +NPRSTVGTITEIHDYLR+L+AR+G+ CP Sbjct: 65 QFLGQMPKPDVDFIGGLSPSISISQKSTGNNPRSTVGTITEIHDYLRVLYARIGQGFCPK 124 Query: 123 HDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARIDGE 182 + AQ+ Q++++++S G +L +LAP+I+++KGE+ E+L QG++RAR+DG Sbjct: 125 CGRAITAQSREQIIESIISLESGTKLQILAPLIRQQKGEYRDLFEDLLKQGFVRARVDGN 184 Query: 183 VCDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVADMDD--- 239 V LSD L+ Q +H IEVV+DR +R D+ RLAE+ E AL++ G +VA +D Sbjct: 185 VVQLSDKLSLDRQMRHDIEVVIDRLVMRSDIRPRLAEAVELALKMGQGNLIVAIENDSAV 244 Query: 240 -PKAE---------------------------------------ELLFSANFACPICGYS 259 P AE +LL+S+++AC C S Sbjct: 245 KPSAEFTEALRTAQSQETDSDSEESEEAETKTTKKRRGGSARPGDLLYSSSYACTPCKLS 304 Query: 260 MRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPELSLAGGAIRG---WDRRNFY 316 P+LFSFN+P G CP CDGLGV FDP ++ +P L+ GAI W + Sbjct: 305 FEPPSPQLFSFNSPQGMCPQCDGLGVMYSFDPVLLVPSPNLNFKEGAIEPVGSWHDLGRW 364 Query: 317 YFQMLKSLA----DHYKFD----VEAPWGSLSANVHKVVLYGSGKENIEFKYMNDRGDTS 368 + + +A + D +E PW SL+A++ K+ L+G+G E+I + + + Sbjct: 365 RRHIFQGVADTVERKRELDAGTMLETPWKSLAADLKKLWLWGTGDEHITYTWRGGKEP-M 423 Query: 369 IRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGTRLRREARHVYV----- 423 + FEGV+ + +Y+ ++S + + L +++S C +C+G RL +ARHV + Sbjct: 424 MYGGKFEGVIPELTAKYRGSKSKSQIKGLERYMSMVSCPACKGERLIEQARHVRLTSTAP 483 Query: 424 ----ENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLT 479 + LP +S++++ A +FF +L L + IA ++LKEI RL FL++VGL+YL+ Sbjct: 484 GYVGKQLTLPEVSNLAVSEASKFFASLALDQTQTTIAAEVLKEIRTRLGFLIDVGLDYLS 543 Query: 480 LSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGN 539 L R+A TLSGGE+QRIRLA QIG+GLVGV+Y+LDEPSIGLH RDN+RLL TL LRD+GN Sbjct: 544 LDRTAPTLSGGESQRIRLAGQIGSGLVGVLYILDEPSIGLHPRDNDRLLSTLHRLRDMGN 603 Query: 540 TVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIE 599 TVIVVEHDED +RAAD +ID GPG GV GGEVV GP ++ SLTGQY+SG+++IE Sbjct: 604 TVIVVEHDEDTMRAADTIIDFGPGPGVRGGEVVVHGPPSEVIKNKRSLTGQYLSGEKQIE 663 Query: 600 VPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQ 659 VP KR A EK L+L G NNLK+VT +P+G C+TGVSGSGKS+L+ D L Sbjct: 664 VPAKRR-AVGEKALRLVGCTHNNLKNVTAEIPLGGLICVTGVSGSGKSSLVTDILVEALH 722 Query: 660 RQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVP 719 R LN P + I+GLEH DK+I IDQ+PIGRTPRSNP TY +F +R+LF +P Sbjct: 723 RDLNFGE-GNPGAHEKIEGLEHLDKLISIDQTPIGRTPRSNPGTYIKLFDDIRDLFTQLP 781 Query: 720 ESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIK 779 E++ RGY PGRFSFNV GGRCEAC+G+G K+EM FL D++V C C+GKR+NRETL++K Sbjct: 782 EAKRRGYKPGRFSFNVEGGRCEACEGNGSNKLEMDFLADVWVTCPVCEGKRFNRETLQVK 841 Query: 780 YKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVK 839 +K K+I +VL+M +++A E F+ VP + KLQTL DVGL YI++GQ++ TLSGGEAQR+K Sbjct: 842 FKDKSIADVLEMDVQQALELFENVPHVRHKLQTLHDVGLDYIKIGQASPTLSGGEAQRIK 901 Query: 840 LARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTAD 899 LAREL K+ TG+TLY+LDEPTTGLHFADI LL VLH D GNT++V+EHNLDVIKTAD Sbjct: 902 LARELVKKSTGKTLYLLDEPTTGLHFADIHLLLGVLHNFADAGNTVLVVEHNLDVIKTAD 961 Query: 900 WIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLKPML 940 WI+D+GPEGG+ GGEIL GTPE +A+ SHT R L +L Sbjct: 962 WIIDMGPEGGAAGGEILAVGTPEEIAKNTRSHTGRALAKIL 1002 Score = 1091 bits (2821), Expect = 0.0, Method: Composition-based stats. Identities = 449/1001 (44%), Positives = 633/1001 (63%), Gaps = 69/1001 (6%) Query: 2 DKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYA 61 +I VRGAR HNLK +++ + RDK+ V G SGSGKSSLA DT+YAEGQRRYVESLSAYA Sbjct: 1034 KQITVRGARQHNLKGVDVTVERDKMTVFCGPSGSGKSSLAMDTIYAEGQRRYVESLSAYA 1093 Query: 62 RQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCP 121 RQF++ M+KP V+HI+GLSPAI+IEQK+ H PRSTVGT+TE++DY R+L AR+G+ CP Sbjct: 1094 RQFVAQMQKPLVEHIDGLSPAIAIEQKNLGHTPRSTVGTVTEVYDYFRILMARLGQAYCP 1153 Query: 122 DHDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARIDG 181 D+P+ QT Q+VD++L++ EG +L L+API + + E+L S GY R R+DG Sbjct: 1154 ACDIPVGTQTADQVVDSILTELEGAKLYLMAPIEIDAGQTYASLFEHLRSIGYSRVRVDG 1213 Query: 182 EVCDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVADMD--- 238 L P ++ ++KHT+EVV+DR V RLA S E AL L G VA +D Sbjct: 1214 VTSSLDAAPTIDRRRKHTVEVVIDRVNVNPAQRSRLAGSIENALALGKGVLHVAKVDESI 1273 Query: 239 -DPKAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQN 297 +P+ E ++ S + AC C S L P FSFN+ G C C+GLG Q + V+ + Sbjct: 1274 PEPRWEVMVHSQHMACRKCNRSFEPLSPHSFSFNSTLGWCKACEGLGTQVGANLAAVVSD 1333 Query: 298 PELSLAGGAIRGWDRRNF-YYFQMLKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKENI 356 P+ +L G I W ML +LA ++ P+ L +++L+G+G+ Sbjct: 1334 PKRTLREGVIDVWPSLQLPLSSAMLDALARSTGLPLDKPFDQLGHRFKRLLLHGTGE--- 1390 Query: 357 EFKYMNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGTRLRR 416 ++ + +G IR F+GV +E S ++R +L ++ C++C G+RLR Sbjct: 1391 QWHEVAAKGLPKIR-FQFKGVYPALEE--ASKLSPSLRVKLESLVAEVECSTCGGSRLRD 1447 Query: 417 EARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNVGLN 476 ++ + + + +G + + L + KIA ++ +EI R++FLV+VGL+ Sbjct: 1448 DSSAARFRSRTIDEYCRLPLGTLLSEIQHWNLTDRERKIAGELTREIVGRVQFLVDVGLD 1507 Query: 477 YLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRD 536 YL+LSR A TLS GEAQRIRLASQ+G+GL GV+YVLDEP+IGLH RDN +LLG L LRD Sbjct: 1508 YLSLSRGAATLSNGEAQRIRLASQLGSGLCGVLYVLDEPTIGLHPRDNRKLLGALHKLRD 1567 Query: 537 LGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKR 596 LGNT++VVEHD + I DH++D GP AG GG+VVA+ + S+TG Y+SGK+ Sbjct: 1568 LGNTLLVVEHDREVIEHCDHIVDFGPRAGKLGGQVVADATPAMLGKSKTSVTGPYLSGKK 1627 Query: 597 KIEVPKKRVPA-------------------------------------NPEKVLKLTGAR 619 I +P+ R + ++++ GAR Sbjct: 1628 SIAIPRTRRISPLVVEPSRTKKKPAPSPLDKYEDRLKLAREASATKLLEGRPLIEVIGAR 1687 Query: 620 GNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAEPAPYRDIQGL 679 NNL++V++ +P+G + +TG SGSGKSTLI + L+ R+L+ A++ P + +++GL Sbjct: 1688 HNNLRNVSIQIPLGTLSVVTGPSGSGKSTLIEEVLYASIARKLHRASLT-PGAHDEVRGL 1746 Query: 680 EHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESRARGYTPGRFSFNVRGGR 739 EH +KVI +DQ P+G +P SNPATYTG F +R+LFA +PE++ RGY+ RFSFNV GGR Sbjct: 1747 EHINKVIRVDQQPLGNSPSSNPATYTGAFELIRQLFAQLPEAKLRGYSARRFSFNVPGGR 1806 Query: 740 CEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREF 799 CEAC+G+G ++EMHFL D++V C+ C+GKRYN ETL + + G++I EVLDMT EA + Sbjct: 1807 CEACEGNGQRRIEMHFLADVWVECETCRGKRYNAETLAVTFHGQSISEVLDMTCSEALQL 1866 Query: 800 FDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEP 859 F +P + R L+TL DVGL Y+ LGQ+A TLSGGEAQRVKLA ELS+ TG+TLY+LDEP Sbjct: 1867 FANIPKIRRILETLCDVGLDYLTLGQAAPTLSGGEAQRVKLAAELSRPDTGRTLYLLDEP 1926 Query: 860 TTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSG 919 TTGLHF D+ +LL+VL +L D GNT+V+IEHNLD+IK+ADW++D+GP+ G GG+++ G Sbjct: 1927 TTGLHFDDLARLLEVLQRLVDLGNTVVLIEHNLDIIKSADWLIDMGPDAGENGGQVVACG 1986 Query: 920 TPETVAECE--------------------ASHTARFLKPML 940 TPE + SHT L+P++ Sbjct: 1987 TPEMIVAHAIDALEAINSKKQSPSDRPLLRSHTGEALEPVI 2027 Score = 247 bits (631), Expect = 1e-63, Method: Composition-based stats. Identities = 115/366 (31%), Positives = 172/366 (46%), Gaps = 55/366 (15%) Query: 403 NRPCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKE 462 C CEG R RE V ++ + + +M + A+E F N+ Sbjct: 822 WVTCPVCEGKRFNRETLQVKFKDKSIADVLEMDVQQALELFENVP--------------H 867 Query: 463 IGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVG-VMYVLDEPSIGLHQ 521 + +L+ L +VGL+Y+ + +++ TLSGGEAQRI+LA ++ G +Y+LDEP+ GLH Sbjct: 868 VRHKLQTLHDVGLDYIKIGQASPTLSGGEAQRIKLARELVKKSTGKTLYLLDEPTTGLHF 927 Query: 522 RDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIM 581 D LLG L + D GNTV+VVEH+ D I+ AD +ID+GP G GGE++A G E I Sbjct: 928 ADIHLLLGVLHNFADAGNTVLVVEHNLDVIKTADWIIDMGPEGGAAGGEILAVGTPEEIA 987 Query: 582 AVPESLTGQYM-----------------SGKRKIEVPKKRVPANPEKVLKLTGARGNNLK 624 S TG+ + + + K A K + + GAR +NLK Sbjct: 988 KNTRSHTGRALAKILSQTPASLMAAATAARAARNGKAAKNGSALLAKQITVRGARQHNLK 1047 Query: 625 DVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAEPAPYRD------IQG 678 V +T+ T G SGSGKS+L DT++ QR+ + A + ++ Sbjct: 1048 GVDVTVERDKMTVFCGPSGSGKSSLAMDTIYAEGQRRYVESLSAYARQFVAQMQKPLVEH 1107 Query: 679 LEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESRARGYTPGRFSFNVRGG 738 ++ I I+Q +G TPRS T T V+ R L A + ++ Sbjct: 1108 IDGLSPAIAIEQKNLGHTPRSTVGTVTEVYDYFRILMARLGQA----------------- 1150 Query: 739 RCEACQ 744 C AC Sbjct: 1151 YCPACD 1156 Score = 96.5 bits (239), Expect = 4e-18, Method: Composition-based stats. Identities = 44/144 (30%), Positives = 61/144 (42%), Gaps = 23/144 (15%) Query: 609 PEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIA 668 P + + GAR +NL+DV+L LP C+TGVSGSGKS+L DTLF QR+ + + Sbjct: 2 PPTDIVIQGAREHNLRDVSLVLPRNQLICLTGVSGSGKSSLAFDTLFAEGQRRYVESLSS 61 Query: 669 EPAPYR------DIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESR 722 + D+ + I I Q G PRS T T + +R L+A + Sbjct: 62 YARQFLGQMPKPDVDFIGGLSPSISISQKSTGNNPRSTVGTITEIHDYLRVLYARI---- 117 Query: 723 ARGYTPGRFSFNVRGGRCEACQGD 746 G C C Sbjct: 118 -------------GQGFCPKCGRA 128 >UniRef50_Q2SR90 Excinuclease ABC, A subunit n=5 Tax=Bacteria RepID=Q2SR90_MYCCT Length = 946 Score = 1171 bits (3030), Expect = 0.0, Method: Composition-based stats. Identities = 460/945 (48%), Positives = 659/945 (69%), Gaps = 11/945 (1%) Query: 2 DKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYA 61 DKI ++GAR HNLKNI+L +P++KLIV TGLSGSGKSSLAF T+Y EG+RRY+ESLSAYA Sbjct: 4 DKIIIKGAREHNLKNIDLELPKNKLIVFTGLSGSGKSSLAFSTIYQEGRRRYIESLSAYA 63 Query: 62 RQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCP 121 RQFL EKPDVD IEGLSPAISI+QK+TSHNPRSTVGT+TEI+DYLRLL+AR+G+P C Sbjct: 64 RQFLGGNEKPDVDSIEGLSPAISIDQKTTSHNPRSTVGTVTEIYDYLRLLYARIGQPYCI 123 Query: 122 DHDVPLAAQTVSQMVDNV-LSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARID 180 ++ + A ++ ++V+N+ S +G+++ +L+P+I+++KG H LE L + G+IR +D Sbjct: 124 NNHGQIKAVSIKEIVENIKQSTSDGEQIHILSPVIRDKKGTHIDILEKLRNDGFIRVIVD 183 Query: 181 GEVCDLSDPPKLELQKKHTIEVVVDRFK--VRDDLTQRLAESFETALELSGGTAVVADMD 238 ++ L D LE ++H I++VVDR D++ R+ + E L+ S +A + Sbjct: 184 DQLRMLDDQINLEKNQRHNIDIVVDRIIYHNNDEINSRIFTAVEMGLKYSNNLIKIAFPN 243 Query: 239 DPKAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNP 298 K +E LFS +F+C +C + + ELEPRLFSFN P GAC C+GLGV D + ++ + Sbjct: 244 SNK-QEKLFSTSFSCKVCDFVVPELEPRLFSFNAPLGACELCNGLGVSLEPDINLILPDL 302 Query: 299 ELSLAGGAIRGWDR---RNFYYFQMLKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKEN 355 +LS+ G + + +Q + L D+Y D+ P L+ ++L+GS +E Sbjct: 303 KLSINQGGVVYYKNFMHTKNIEWQKFRILCDYYYIDLNTPLKDLTQKQRDIILWGSDRE- 361 Query: 356 IEFKYMNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGTRLR 415 I+ K + + + + EG ++RRY E++S R+ +KF+S++ C C+G+RL Sbjct: 362 IDIKIVTENNNKYEKYDFIEGNAALIKRRYFESKSEEARKWYSKFMSSKICKQCKGSRLN 421 Query: 416 REARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNVGL 475 A V + + ++MSI ++F N+ L +A IA+ +L EI R FL VGL Sbjct: 422 DIALSVKINEKSIFDYTNMSISEQLDFLLNIDLTPTQAMIAKLVLDEIISRTNFLNEVGL 481 Query: 476 NYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLR 535 YL LSR+A TLSGGE+QRIRLA QIG+ L G++YVLDEPSIGLHQ+DN++L+ TL HLR Sbjct: 482 GYLNLSRTATTLSGGESQRIRLAKQIGSQLTGILYVLDEPSIGLHQKDNDKLIKTLKHLR 541 Query: 536 DLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGK 595 DLGNT+IVVEHDED ++++D ++DIGP AG +GGE+ G + I+ +++TG+Y+S K Sbjct: 542 DLGNTLIVVEHDEDTMKSSDWIVDIGPRAGEYGGEITFSGTYQDILK-SDTITGRYLSRK 600 Query: 596 RKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLF 655 I VPK R N +K +++ GA NNLK++ +T+P+ F ITGVSGSGKSTL+ D ++ Sbjct: 601 EGIVVPKIRRGGNGKK-IEIIGASENNLKNINVTIPLNKFITITGVSGSGKSTLLEDIVY 659 Query: 656 PIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELF 715 L+ + ++I+G+E+ +K I I Q PIG+TPRSNPATYT VF +R+LF Sbjct: 660 KGIHNNLSKEYLP-IGKVKEIKGIENINKAIYISQEPIGKTPRSNPATYTSVFDDIRDLF 718 Query: 716 AGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRET 775 +PE++ RGY GRFSFNV GGRCE CQGDGVI + M F+P + V C+ C+GKRYN ET Sbjct: 719 TNLPEAKIRGYKKGRFSFNVHGGRCEHCQGDGVITISMQFMPSVEVVCEICEGKRYNDET 778 Query: 776 LEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEA 835 L +KYK K+I +VL+M++ EA FF+ +P + +KL+T+++VGL YI+LGQ+ATTLSGGE+ Sbjct: 779 LTVKYKNKSIADVLNMSVSEAYVFFENIPQIKQKLETILEVGLGYIKLGQNATTLSGGES 838 Query: 836 QRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVI 895 QR+KL+ L K+ TG T+++LDEPTTGLH D+++L+ VL+KL D GNT++ IEHNLD I Sbjct: 839 QRIKLSTYLLKKQTGNTMFLLDEPTTGLHVDDVKRLIGVLNKLVDLGNTVLCIEHNLDFI 898 Query: 896 KTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLKPML 940 K +D I+DLGP+GG GG+++V+GTPE + S+TA++LK + Sbjct: 899 KVSDHIIDLGPDGGEYGGQVVVTGTPEQIINHPTSYTAKYLKDYI 943 >UniRef50_Q2RZZ5 Excinuclease ABC, A subunit n=1 Tax=Salinibacter ruber DSM 13855 RepID=Q2RZZ5_SALRD Length = 1016 Score = 1157 bits (2993), Expect = 0.0, Method: Composition-based stats. Identities = 480/985 (48%), Positives = 650/985 (65%), Gaps = 50/985 (5%) Query: 2 DKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYA 61 + I +RGAR +NL+ I+L IPR++L+VVTGLSGSGKSSLAFDT++AEGQRRY+ESLSAYA Sbjct: 3 EHITLRGARENNLQAIDLDIPRNRLVVVTGLSGSGKSSLAFDTIFAEGQRRYMESLSAYA 62 Query: 62 RQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCP 121 RQFL +ME+P++D+++GLSP ISIEQK+ S NPRSTVGT+TE++D+LRLL+AR Sbjct: 63 RQFLEMMERPEIDYVDGLSPVISIEQKTVSGNPRSTVGTVTEVYDFLRLLYARAATAYSH 122 Query: 122 DHDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARIDG 181 + + Q+ ++VD +L PEG RL +LAP+++ RKG + + E ++QG+ R R+DG Sbjct: 123 ETGNRMRQQSDDEIVDGILDFPEGTRLQILAPVVRGRKGHYRELFEQTSAQGFERFRVDG 182 Query: 182 EVCDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVADMDDPK 241 E+ + KLE H +EVV+DR ++D + R+++S ETALE+ GGT + +D P Sbjct: 183 EMRTYEEDMKLERYATHDVEVVIDRLAIKDGIRSRVSQSVETALEMGGGTLIADVVDGPD 242 Query: 242 AEE---LLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNP 298 E LFS + P G S E P +FSFN P GACP C+GLG + P+ V+ +P Sbjct: 243 GVETGDHLFSRDLVDPETGLSYEEPSPNMFSFNTPYGACPECEGLGTAKQIAPELVVPHP 302 Query: 299 ELSLAGGAIRGW-DRRNFYYFQMLKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKENIE 357 E ++ GA+ + R+ + F L+++A+ Y FD + P +LS V+L G+G+E E Sbjct: 303 EKTINEGALAPLGEPRDIWIFNQLEAVAEAYDFDFDTPIEALSDEQLAVILEGAGEEQFE 362 Query: 358 FKYMNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGTRLRRE 417 +Y +G +H F+G+ ++ Y+ET SS R F+ C +C G RL+ E Sbjct: 363 IEY-GYKGREVQYKHRFDGLYDHIWHTYEETSSSKKRRRAESFMREMDCPACGGGRLKTE 421 Query: 418 ARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRA-KIAEKILKEIGDRLKFLVNVGLN 476 + H + + ++ M + +F ++ +R +I E I+KE+ +RL FL+ VG+ Sbjct: 422 SLHYRIGGKSIADLAQMDLTRLRDFVEDVPFDTERQTRIGEPIVKEVRERLDFLIGVGVG 481 Query: 477 YLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRD 536 YLTL R A TLSGGE+QRIRLA+Q+G L GV+YVLDEP+IGLH RDN+RL+ +L LRD Sbjct: 482 YLTLDRPARTLSGGESQRIRLATQVGTQLTGVLYVLDEPTIGLHPRDNDRLIESLESLRD 541 Query: 537 LGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVP------------ 584 LGN+V+VVEHD D I AADHV+D+GPGAG+HGG V+ GP + P Sbjct: 542 LGNSVVVVEHDRDMIEAADHVVDLGPGAGIHGGHVITTGPPSVLTVDPVEQTNGTAANGA 601 Query: 585 -----------------------------ESLTGQYMSGKRKIEVPKKRVPANPEKVLKL 615 ES T Y+ G+R I +P +R E + L Sbjct: 602 AEHEIEDNGVARQQVAERAADYDSDHYDFESFTAAYLQGERVIPLPDERRDGTGES-ITL 660 Query: 616 TGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAEPAPYRD 675 GA G+NLK + +P+G C+TGVSGSGKSTL+N TLFPI R + A P PY Sbjct: 661 KGATGHNLKGEDVDVPLGTLICVTGVSGSGKSTLVNQTLFPILHRHHHNAKTV-PLPYDR 719 Query: 676 IQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESRARGYTPGRFSFNV 735 ++G++H DKVI+IDQ PIGRTPRSN ATYT + +R+LFA +PE+ RGYT RFSFN Sbjct: 720 VEGIDHVDKVIEIDQQPIGRTPRSNAATYTKLMDYLRDLFAQLPEAEIRGYTKSRFSFNT 779 Query: 736 RGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEE 795 GRC+ C G G + +EM+FLPD+ V CD C GKRY ETLE++YKGK I EVLDMT+ E Sbjct: 780 DPGRCDKCGGTGTVTLEMNFLPDVDVTCDACDGKRYGPETLEVEYKGKNIAEVLDMTVAE 839 Query: 796 AREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYI 855 A +FF+ P L R L+TL VGL Y+ LGQS+TTLSGGEAQRVKL++ELS+ GTG TLYI Sbjct: 840 AVDFFENQPRLVRTLKTLDAVGLGYLTLGQSSTTLSGGEAQRVKLSKELSRPGTGDTLYI 899 Query: 856 LDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEI 915 LDEPTTG+HF D++ LL+VLH L D+GNT++VIEHN+DVIK AD ++DLGPEGG GGEI Sbjct: 900 LDEPTTGMHFEDVRHLLNVLHGLVDEGNTVMVIEHNMDVIKQADHVIDLGPEGGREGGEI 959 Query: 916 LVSGTPETVAECEASHTARFLKPML 940 L G PE +AE +HT+ +L+ L Sbjct: 960 LFEGRPEALAEA-DTHTSAYLREEL 983 >UniRef50_P47660 UvrABC system protein A n=6 Tax=Bacteria RepID=UVRA_MYCGE Length = 952 Score = 1157 bits (2992), Expect = 0.0, Method: Composition-based stats. Identities = 473/945 (50%), Positives = 654/945 (69%), Gaps = 12/945 (1%) Query: 2 DKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYA 61 D I V+GAR +NLKNIN+ IP+++ +V+TGLSGSGKSSLAF+T+YAEG+RRY+ESLS+YA Sbjct: 9 DFIRVKGARENNLKNINIDIPKNQFVVITGLSGSGKSSLAFNTIYAEGRRRYLESLSSYA 68 Query: 62 RQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCP 121 RQFL +KPDVD IEGLSPAISI+QK+TSHNPRST+GT+TEI+DYLRLL+AR+G P CP Sbjct: 69 RQFLGNSDKPDVDLIEGLSPAISIDQKTTSHNPRSTMGTVTEIYDYLRLLWARIGTPYCP 128 Query: 122 DHDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARIDG 181 + + QT++Q+ + + P ++ LLAP +K ++G T G++R +DG Sbjct: 129 NGHGSIQTQTINQIANQIFDLPNKSKVQLLAPTVKNQRGIFTNEFIKYKQLGFLRVLVDG 188 Query: 182 EVCDLSDPPKLELQKKHTIEVVVDRFKVRDDLT--QRLAESFETALELSGGTAVVADMDD 239 ++ L D KL+ KH I VV+DR + D R+ +S ET L+ G V D Sbjct: 189 QIYTLDDEIKLDKNTKHNISVVIDRIIINKDNQTYSRIVDSIETIDRLTNGKIEVLKED- 247 Query: 240 PKAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPE 299 L FS N C CG+S+ ELEPRLFSFN+P G+C C GLG D D++I + + Sbjct: 248 --GTILNFSKNHGCDKCGFSISELEPRLFSFNSPLGSCSYCKGLGFSYEPDVDKIIADSK 305 Query: 300 LSLAGGAIRGWDR---RNFYYFQMLKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKENI 356 LS+ GAI + +Q SL +HYK ++ P L + ++L GS E I Sbjct: 306 LSINQGAIDIFKNIVHGTSLDWQRFLSLVNHYKIPLDKPIEQLDKSQLNLILEGS-DEPI 364 Query: 357 EFKYMNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGTRLRR 416 E K +++ G +IR +EG+ + ++RR+ ET S RE + ++S C C G +L + Sbjct: 365 EIKTISNSGAKNIRFEHYEGIANLIKRRHLETNSQVSREWYSAYMSEITCKKCHGKKLIK 424 Query: 417 EARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNVGLN 476 +A V + + + +++SI +++F L+L ++ KI E LKEI +RL FL NVGL+ Sbjct: 425 DALSVKLGGIDIISFTELSIDKSIDFLLKLELNDEQKKIGELALKEIINRLSFLKNVGLD 484 Query: 477 YLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRD 536 YL L+R A TLSGGEAQRIRLA+QIG+ L GV+YV+DEPSIGLHQ+DN RL+ T++ +RD Sbjct: 485 YLNLARRASTLSGGEAQRIRLATQIGSQLTGVLYVMDEPSIGLHQKDNMRLIKTMMVMRD 544 Query: 537 LGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKR 596 LGNT++VVEHD + + AAD++IDIGP AG GGE+VA G +M S+TGQY+SGK+ Sbjct: 545 LGNTLLVVEHDSETMLAADYLIDIGPKAGNEGGELVACGTPLQVMENSNSITGQYLSGKK 604 Query: 597 KIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFP 656 +I +PK R N + ++ + GA+ NNLK++ +T+P+ ITGVSGSGKS+LIN TL P Sbjct: 605 QISIPKNRHSGNGKTII-IKGAKVNNLKNINVTIPLNKLVLITGVSGSGKSSLINQTLVP 663 Query: 657 IAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFA 716 +R L + + Y++I G + DK+I + Q PIGRTPRSNPATY VF +R+LFA Sbjct: 664 ALERILYRKGVKKDT-YKEIIGANNIDKIIVVSQDPIGRTPRSNPATYISVFDDIRDLFA 722 Query: 717 GVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETL 776 E++ARGYT RFSFNV GGRC+ C GDGVI++EMHFLPD+YV C+ C GK+YN +TL Sbjct: 723 NTKEAKARGYTNSRFSFNVPGGRCDKCFGDGVIRIEMHFLPDVYVKCEVCNGKKYNSQTL 782 Query: 777 EIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQ 836 EIKY GK+I +VL M+ +EA EFF A+P ++RKL+ L DVGL Y++LG + T LSGGEAQ Sbjct: 783 EIKYLGKSIFDVLQMSCKEAYEFFKAIPNISRKLRLLCDVGLEYLQLGINVTFLSGGEAQ 842 Query: 837 RVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIK 896 R+KL++ L K+ TG+TL++LDEP+TGLH DI +LL ++ ++ G+T+VVIEHNLD+IK Sbjct: 843 RIKLSKFLQKKSTGKTLFVLDEPSTGLHLEDINKLLTIIQRIIKNGDTVVVIEHNLDIIK 902 Query: 897 TADWIVDLGPEGGSGGGEILVSGTPETVA-ECEASHTARFLKPML 940 AD+I+DLGPEGG GG+I+ GTPE + + S+TA++L +L Sbjct: 903 VADYIIDLGPEGGDNGGQIVAQGTPEQLINQVNKSYTAQYLSKIL 947 Score = 97.3 bits (241), Expect = 2e-18, Method: Composition-based stats. Identities = 35/118 (29%), Positives = 59/118 (50%), Gaps = 6/118 (5%) Query: 607 ANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGAT 666 +++ GAR NNLK++ + +P F ITG+SGSGKS+L +T++ +R+ + Sbjct: 5 WKNNDFIRVKGARENNLKNINIDIPKNQFVVITGLSGSGKSSLAFNTIYAEGRRRYLESL 64 Query: 667 IAEPAPYR------DIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGV 718 + + D+ +E I IDQ PRS T T ++ +R L+A + Sbjct: 65 SSYARQFLGNSDKPDVDLIEGLSPAISIDQKTTSHNPRSTMGTVTEIYDYLRLLWARI 122 >UniRef50_B6WY93 Putative uncharacterized protein n=1 Tax=Desulfovibrio piger ATCC 29098 RepID=B6WY93_9DELT Length = 976 Score = 1152 bits (2980), Expect = 0.0, Method: Composition-based stats. Identities = 461/965 (47%), Positives = 620/965 (64%), Gaps = 38/965 (3%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 63 I + AR HNLK+I+L IPRD+L+VV G SGSGKS+LAFD +YAEGQRRYVESLSAYARQ Sbjct: 6 IHIEKARQHNLKDISLDIPRDELVVVCGPSGSGKSTLAFDIVYAEGQRRYVESLSAYARQ 65 Query: 64 FLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCPDH 123 FL M+KPDV+ IEGLSPAIS+EQ+STS PRSTVGT+TEIHD+LR+ FAR+G CP Sbjct: 66 FLPQMDKPDVEKIEGLSPAISLEQQSTSRTPRSTVGTVTEIHDFLRVFFARLGRMYCPSC 125 Query: 124 DVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARIDGEV 183 P+ A++ +++ ++++ P+G + M++AP+++ +KG H + L ++G+ R R+DG Sbjct: 126 GRPIEARSADEIITDIMALPQGSKFMVMAPLVELQKGTHQDKFKKLRAEGFARVRVDGAF 185 Query: 184 CDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVADMDDPKAE 243 L D P L+ KKH+I++VVDR +D + RLA+S E AL G V D P+ E Sbjct: 186 HTLDDVPALDKNKKHSIDLVVDRLVNKDGIRGRLADSVELALRYGEGRLTVHLPDRPEGE 245 Query: 244 -ELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPELSL 302 +++ S CP C S+ P+LFSFN+P GACP C GLG YF+P + N LSL Sbjct: 246 RDIIHSTTSVCPHCHISLPAPSPQLFSFNSPQGACPRCVGLGTVDYFEPRLIAPNRGLSL 305 Query: 303 AGGAIRGWDRRNF--YYFQMLKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKENIEFK- 359 GA+ W Y L++L + + F + P S + YG ++ Sbjct: 306 NTGALLPWAESKHFQRYEPALRALGERHGFTLSTPLEDFSDAALACLFYGEDEKGRPAAH 365 Query: 360 -------------------------YMNDRGDTSIRRHPFEGVLHNMERRYKETESSAVR 394 + + + + GV+ +E+ + A R Sbjct: 366 SSGLRRNWMGGNVAMDATGDYQSELFAGRAAEVKVSEERWPGVIPLLEKGMQ--YGEAWR 423 Query: 395 EELAKFISNRPCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAK 454 E LA+F + C C G RL+ EA V V++ + +S+ A+ + G+ A Sbjct: 424 EILARFRQSTDCPDCHGARLKPEALAVRVDDLNIAQFCSLSVERALRWLEERHFDGRHAL 483 Query: 455 IAEKILKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDE 514 +AE +LKE+ RL F+ NVGL YL+L R+ TLSGGEAQRIRLASQ+G+GLVGV YVLDE Sbjct: 484 VAEPLLKELTHRLSFMRNVGLEYLSLGRAMATLSGGEAQRIRLASQLGSGLVGVTYVLDE 543 Query: 515 PSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAE 574 PSIGLH RDNERLLGTL L+ GNTV+VVEHDE I AAD VI++GPG+G GGE++ + Sbjct: 544 PSIGLHPRDNERLLGTLRSLQRRGNTVLVVEHDEATICAADTVIELGPGSGSQGGEIMFQ 603 Query: 575 GPLEAIMAVPESLTGQYMSGKRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGL 634 G + ++ ++LT +Y+ G I +P +R P+ L L NNL+ + P+G+ Sbjct: 604 GSVPQLLRA-DTLTARYLRGDASISLPDERR--EPQGWLTLHNVTTNNLRGIDCRFPLGV 660 Query: 635 FTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAEPAPYRDI---QGLEHFDKVIDIDQS 691 TC+TGVSGSGKS+L+ DTL+ L G + +P + +G ++++ IDQ+ Sbjct: 661 LTCVTGVSGSGKSSLVVDTLYKHLAISL-GQRVDQPGTIAGLSYSEGARPIERIVAIDQT 719 Query: 692 PIGRTPRSNPATYTGVFTPVRELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKV 751 PIGRTPRSNPATYT VF +R +FA P++R RGY PGRFSFNVRGGRCEAC GDG I+V Sbjct: 720 PIGRTPRSNPATYTKVFDEIRNIFAMTPDARKRGYKPGRFSFNVRGGRCEACGGDGQIRV 779 Query: 752 EMHFLPDIYVPCDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQ 811 EMHFLPD+YV CD CKG+RYN ETLE++YKG I EVLD+ +++AR FF+ P L R+L Sbjct: 780 EMHFLPDVYVTCDVCKGRRYNHETLEVRYKGLNIAEVLDLPVQQARAFFENYPVLERRLA 839 Query: 812 TLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQL 871 L +VGL Y+RLGQ ATTLSGGEAQR+K++REL KR TLYILDEPTTGLH ++ +L Sbjct: 840 VLEEVGLEYLRLGQPATTLSGGEAQRIKISRELGKRSLPGTLYILDEPTTGLHMHEVGKL 899 Query: 872 LDVLHKLRDQGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEASH 931 + VLH L D+G ++VVIEHN D+I AD ++D+GP GG GG ++ GTPE + S Sbjct: 900 IKVLHALVDKGASVVVIEHNTDMILAADHVLDMGPGGGENGGLVVSQGTPEAIVADPNSV 959 Query: 932 TARFL 936 T RFL Sbjct: 960 TGRFL 964 Score = 175 bits (444), Expect = 7e-42, Method: Composition-based stats. Identities = 77/202 (38%), Positives = 116/202 (57%), Gaps = 15/202 (7%) Query: 403 NRPCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKE 462 C C+G R E V + + + D+ + A FF N + Sbjct: 788 YVTCDVCKGRRYNHETLEVRYKGLNIAEVLDLPVQQARAFFENYPV-------------- 833 Query: 463 IGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIG-AGLVGVMYVLDEPSIGLHQ 521 + RL L VGL YL L + A TLSGGEAQRI+++ ++G L G +Y+LDEP+ GLH Sbjct: 834 LERRLAVLEEVGLEYLRLGQPATTLSGGEAQRIKISRELGKRSLPGTLYILDEPTTGLHM 893 Query: 522 RDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIM 581 + +L+ L L D G +V+V+EH+ D I AADHV+D+GPG G +GG VV++G EAI+ Sbjct: 894 HEVGKLIKVLHALVDKGASVVVIEHNTDMILAADHVLDMGPGGGENGGLVVSQGTPEAIV 953 Query: 582 AVPESLTGQYMSGKRKIEVPKK 603 A P S+TG+++ +R+ + ++ Sbjct: 954 ADPNSVTGRFLMQERRDRLKRR 975 Score = 93.1 bits (230), Expect = 5e-17, Method: Composition-based stats. Identities = 38/127 (29%), Positives = 58/127 (45%), Gaps = 10/127 (7%) Query: 609 PEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIA 668 + + AR +NLKD++L +P + G SGSGKSTL D ++ QR+ + A Sbjct: 2 NNPCIHIEKARQHNLKDISLDIPRDELVVVCGPSGSGKSTLAFDIVYAEGQRRYVESLSA 61 Query: 669 EPAPYR------DIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESR 722 + D++ +E I ++Q RTPRS T T + +R FA + Sbjct: 62 YARQFLPQMDKPDVEKIEGLSPAISLEQQSTSRTPRSTVGTVTEIHDFLRVFFARLG--- 118 Query: 723 ARGYTPG 729 R Y P Sbjct: 119 -RMYCPS 124 >UniRef50_C1ZII9 UvrA family protein n=39 Tax=Bacteria RepID=C1ZII9_PLALI Length = 2434 Score = 1148 bits (2970), Expect = 0.0, Method: Composition-based stats. Identities = 488/992 (49%), Positives = 654/992 (65%), Gaps = 57/992 (5%) Query: 3 KIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYAR 62 +I +RGAR HNL++++LV+P++KLIV+TG+SGSGKSSLAFDTLYAEGQRRY+ESLS YAR Sbjct: 5 EITIRGAREHNLRDVSLVLPKNKLIVMTGVSGSGKSSLAFDTLYAEGQRRYIESLSTYAR 64 Query: 63 QFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCPD 122 QFL M KPDVD I GL+P+ISI+QK+ NPRSTVGTITEI+DYLR+LFARVG+ C Sbjct: 65 QFLGSMPKPDVDSITGLAPSISIQQKTAGRNPRSTVGTITEIYDYLRVLFARVGQAECHQ 124 Query: 123 HDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARIDGE 182 P+ +Q+ +V+ +L P G + +LAP+I+ +KGE +L QGY+RAR+DG+ Sbjct: 125 CHRPITSQSPENIVEQILILPAGTKFQILAPLIQRQKGEFKDLFVDLLKQGYLRARVDGK 184 Query: 183 VCDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVA------- 235 LS+ +L+ Q KHTI+VV+DR QR+AE+ E AL+L+ G +V Sbjct: 185 FISLSESLQLDKQMKHTIDVVIDRLVAGKSTRQRVAEAVENALKLANGQLIVLQDSPEEF 244 Query: 236 -------DMDDPKAE---ELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGV 285 + D P E E F+ +AC CG S P+LFSFN+P G C C+GLG+ Sbjct: 245 LSAAIQSEDDSPSQENPSEQFFATAYACTHCGISYDPPSPQLFSFNSPQGMCADCNGLGM 304 Query: 286 QQYFDPDRVIQNPELSLAGGAIR---------GWDRR--NFYYFQMLKSLADHYKFDVEA 334 + F DR+I + LS+ GA+ W R + + K+L+ ++ Sbjct: 305 RHDFLLDRLIPDESLSIQKGALALSGKLSKLGRWRRHLIDGVAAAIEKTLSLKPGEFLKT 364 Query: 335 PWGSLSANVHKVVLYGSGKENIEFKYMNDRGDTSIRRHPFEGVLHNMERRYKETESSAVR 394 PW L + L G G +++ + + + G + G + + Y++ ++ R Sbjct: 365 PWNELPQGARDLFLDGLGNQHVTYSFKHSGGVWKH-GGKYTGYVRELLEEYRKAKNPMRR 423 Query: 395 EELAKFISNRPCASCEGTRLRREARHVYV--------------------------ENTPL 428 +L K++ C++C G+RL +A + ++ + L Sbjct: 424 RQLEKYMEVVGCSTCHGSRLNAQACNYFISSQALEMTTPAIARSGSSSAASQAKKQRLSL 483 Query: 429 PAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTLSRSAETLS 488 P + +S+G A EFF L L IAE++LKEI RL FL+ GL+YL L R+A TLS Sbjct: 484 PGVCHLSVGEAFEFFEQLDLDPTSQYIAEEVLKEIRGRLGFLLRCGLDYLALDRTAPTLS 543 Query: 489 GGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDE 548 GGE+QRIRLA QIG GLVGV+Y+LDEPSIGLH RDNE LLG+L LRD GNTVIVVEHD+ Sbjct: 544 GGESQRIRLAGQIGCGLVGVVYILDEPSIGLHPRDNEMLLGSLQDLRDQGNTVIVVEHDD 603 Query: 549 DAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEVPKKRVPAN 608 + ++AADH+ID GPG GV GG+VV EG LEA++A ES TG Y+SG+++IE+ + R Sbjct: 604 ETMKAADHIIDFGPGPGVRGGKVVHEGSLEALLANEESETGAYLSGRKQIEIRETRRSGI 663 Query: 609 PEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIA 668 + + G +NL++V + P+G F C+TGVSGSGKS+LIND L+P+ R++N Sbjct: 664 GTS-ISIQGCTHHNLQNVDVEFPLGKFICVTGVSGSGKSSLINDILWPLLNREVNLGE-G 721 Query: 669 EPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESRARGYTP 728 P ++ L DK IDIDQSPIGRTPRSNP TY +F +R+L+ +P+S+ RG+ P Sbjct: 722 APGAHQSFDNLALVDKAIDIDQSPIGRTPRSNPTTYVKLFDLIRDLYTQLPDSKTRGFKP 781 Query: 729 GRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKYKGKTIHEV 788 GRFSFNV GGRCEAC+G G K+EM FL DI+V C C+G+R+N+ETLE+++KGK I EV Sbjct: 782 GRFSFNVPGGRCEACEGHGSNKLEMDFLADIWVTCPVCQGRRFNKETLEVRFKGKNIAEV 841 Query: 789 LDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRG 848 LDM ++ A E F+ +P + LQTL DVGL YI+LGQ + TLSGGEAQR+KLA+EL KR Sbjct: 842 LDMDVQTALEHFENLPKIKNLLQTLHDVGLDYIKLGQPSPTLSGGEAQRIKLAKELGKRS 901 Query: 849 TGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADWIVDLGPEG 908 TG+T+YILDEPTTGLHF DI LL VLH D GNT++V+EHNLDVIKTADW++DLGPEG Sbjct: 902 TGKTVYILDEPTTGLHFVDIAHLLRVLHGFVDAGNTVIVVEHNLDVIKTADWVIDLGPEG 961 Query: 909 GSGGGEILVSGTPETVAECEASHTARFLKPML 940 G GGG I+ GTPE VA+CEAS+T RFL +L Sbjct: 962 GKGGGRIIAQGTPEMVAQCEASYTGRFLARVL 993 Score = 1087 bits (2812), Expect = 0.0, Method: Composition-based stats. Identities = 468/1017 (46%), Positives = 626/1017 (61%), Gaps = 82/1017 (8%) Query: 3 KIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYAR 62 I +RGA HNL+ I+L IPRD++ V G SGSGK+SLA DTLYAEGQRRYVESLS+YAR Sbjct: 1070 NIVIRGASQHNLQKISLDIPRDQMSVFCGPSGSGKTSLAMDTLYAEGQRRYVESLSSYAR 1129 Query: 63 QFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCPD 122 QFL M KP V+HI GL P+I+IEQK+ H PRSTVGT TEI+DYLR+L+AR+G CPD Sbjct: 1130 QFLGQMPKPKVEHIHGLQPSIAIEQKTVGHTPRSTVGTTTEIYDYLRVLYARLGTQHCPD 1189 Query: 123 HDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARIDGE 182 + + +QT ++D ++++PEG RL++LAP ++ K E L QG+ R R+DG Sbjct: 1190 CRIAVESQTTDDVIDLLMAKPEGTRLLVLAPQEVPVGQQYAKVWERLKEQGFSRVRVDGT 1249 Query: 183 VCDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVADMDD--- 239 L + P+++ ++KH +E+V+DR + +RLA+S E A + G VA +DD Sbjct: 1250 TYRLEEVPEIDRRRKHVVEIVIDRVTIASGSRRRLADSVEAAFDQGKGVIRVAFVDDDKP 1309 Query: 240 -PKAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNP 298 + FS AC CG S L P FSFN+P G C +C+GLG QQ + +I +P Sbjct: 1310 ENSWKVQPFSLFRACSQCGRSFETLAPHNFSFNSPLGWCESCEGLGTQQGTNLAALIGDP 1369 Query: 299 ELSLAGGAIRGW--DRRNFYYFQMLKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKENI 356 +L GAI W R++ F++L +L+ ++ P+ L ++VL+G+G++ Sbjct: 1370 TRTLREGAISAWPDPRQSPAMFELLDALSRGVGLSLDTPFNQLEPAEQRLVLFGAGEQWF 1429 Query: 357 EF--------------------KYMNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREE 396 K + R F+G+ +E + + S R+ Sbjct: 1430 TVYQVAQPAAAKKSSTKAAAKSKKSSTADQAVKYRFQFKGLYPALEEASRVSYS--FRQS 1487 Query: 397 LAKFISNRPCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIA 456 L I PC+SC G+RLR +A V ++ L + ++ + A EF + L L + KIA Sbjct: 1488 LFDLIGEVPCSSCSGSRLREDASAVRLQGKTLQQLCELPLNKAQEFLHGLTLNKTQQKIA 1547 Query: 457 EKILKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPS 516 +L+E RL FLV+VGL+YLTLSR+ TLSGGE+QRIRLA Q+G L GV+YVLDEP+ Sbjct: 1548 GDLLEEGAGRLDFLVDVGLHYLTLSRTLPTLSGGESQRIRLAGQLGRALTGVLYVLDEPT 1607 Query: 517 IGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGP 576 IGLH DN RLL L LRDLGNTV++VEHD + + AAD + D GPG+G GG V AEG Sbjct: 1608 IGLHPSDNGRLLQALKKLRDLGNTVVLVEHDREVLAAADRLYDFGPGSGRLGGLVTAEGT 1667 Query: 577 LEAIMAVPESLTGQYMSGKRKIEVP-KKRVPANPEK------------------------ 611 I +SLTG+++S K I VP ++RVPA + Sbjct: 1668 PHEIEHCDDSLTGRFLSLKEDILVPTERRVPARFGRSQAPVDRAKSGAATKGKAKAQVAA 1727 Query: 612 -----------VLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQR 660 L+L GAR NNL++V L +P+G T ITGVSGSGKS+LI DTL R Sbjct: 1728 TTKASASKPLFWLELIGARQNNLRNVDLRIPLGALTAITGVSGSGKSSLIADTLGKAIAR 1787 Query: 661 QLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPE 720 +L+ ++ +P PY ++ GL++ K+I +DQ P+G TP SNPATYTGVF +RELFA +PE Sbjct: 1788 KLHRSS-EQPGPYDELLGLDYLSKLIVVDQQPLGNTPASNPATYTGVFEHIRELFAHLPE 1846 Query: 721 SRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKY 780 S+ RGY P RFSFN GGRCE C+G+G +EMHFLPD++V CD C G+RYN ETL +K+ Sbjct: 1847 SKVRGYRPARFSFNRAGGRCETCEGNGQKLIEMHFLPDLWVECDTCHGRRYNPETLAVKF 1906 Query: 781 KGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKL 840 +GK I +VL+M I EA + F++ P + L L +GL Y+ LGQ A TLSGGEAQRVKL Sbjct: 1907 QGKNIADVLEMPISEAVKLFESFPKIRGPLAVLDAIGLGYLTLGQPAPTLSGGEAQRVKL 1966 Query: 841 ARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADW 900 A EL++ TG TLY+LDEPTTGLHF DI++LL +L L D GNT+VVIEHNLDVIKT DW Sbjct: 1967 AAELARPSTGSTLYLLDEPTTGLHFDDIRKLLKILQSLVDAGNTVVVIEHNLDVIKTCDW 2026 Query: 901 IVDLGPEGGSGGGEILVSGTPETVA-----------------ECEASHTARFLKPML 940 IVDLGP GS GG I+ +GTPE + + S TA+ L P+L Sbjct: 2027 IVDLGPAAGSEGGYIVATGTPEDLVRIAQGEVPDDDPSKKNPQQHVSLTAQCLAPVL 2083 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 61/305 (20%), Positives = 121/305 (39%), Gaps = 63/305 (20%) Query: 553 AADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEVPKKRVPANPEKV 612 ADHV+++ + P E +A P + + +P K+ + Sbjct: 1026 TADHVVEMPQKSVART------FPPETKVASPS---------RWQAALPLKQQDREAQTN 1070 Query: 613 LKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAEPAP 672 + + GA +NL+ ++L +P + G SGSGK++L DTL+ QR+ + + Sbjct: 1071 IVIRGASQHNLQKISLDIPRDQMSVFCGPSGSGKTSLAMDTLYAEGQRRYVESLSSYARQ 1130 Query: 673 YR------DIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESRARGY 726 + ++ + I I+Q +G TPRS T T ++ +R L+A + Sbjct: 1131 FLGQMPKPKVEHIHGLQPSIAIEQKTVGHTPRSTVGTTTEIYDYLRVLYARLGT------ 1184 Query: 727 TPGRFSFNVRGGRCEACQG-------DGVIKVEMHFLPD-----IYVPCDQCKGKRYNRE 774 C C+ D VI + M P+ + P + G++Y + Sbjct: 1185 -----------QHCPDCRIAVESQTTDDVIDLLMA-KPEGTRLLVLAPQEVPVGQQYAKV 1232 Query: 775 TLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGE 834 +K +G + V T + VP + R+ + ++++ + + T++ G Sbjct: 1233 WERLKEQGFSRVRVDGTTYR-----LEEVPEIDRRRKHVVEIVIDRV-------TIASGS 1280 Query: 835 AQRVK 839 +R+ Sbjct: 1281 RRRLA 1285 Score = 99.6 bits (247), Expect = 5e-19, Method: Composition-based stats. Identities = 41/118 (34%), Positives = 58/118 (49%), Gaps = 6/118 (5%) Query: 610 EKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAE 669 + + GAR +NL+DV+L LP +TGVSGSGKS+L DTL+ QR+ + Sbjct: 3 RSEITIRGAREHNLRDVSLVLPKNKLIVMTGVSGSGKSSLAFDTLYAEGQRRYIESLSTY 62 Query: 670 PAPYRDIQGLEHFDKV------IDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPES 721 + D + I I Q GR PRS T T ++ +R LFA V ++ Sbjct: 63 ARQFLGSMPKPDVDSITGLAPSISIQQKTAGRNPRSTVGTITEIYDYLRVLFARVGQA 120 >UniRef50_C0QY85 Exinuclease ABC subunit A n=6 Tax=Bacteria RepID=C0QY85_BRAHW Length = 1938 Score = 1147 bits (2967), Expect = 0.0, Method: Composition-based stats. Identities = 461/978 (47%), Positives = 630/978 (64%), Gaps = 47/978 (4%) Query: 2 DKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYA 61 + IE+RGA+ HNLKN++L IP L +TG+SGSGKSSLAFDT++ EGQRRY+ESLSAYA Sbjct: 4 NSIEIRGAKEHNLKNVSLSIPHKTLTTLTGVSGSGKSSLAFDTIFKEGQRRYLESLSAYA 63 Query: 62 RQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCP 121 RQFL +M K DV+HIEGLSP ISI+QKS + NPRSTVGT+TEI+D+ RLLFAR+G P C Sbjct: 64 RQFLGVMAKADVEHIEGLSPTISIDQKSVNKNPRSTVGTVTEIYDFFRLLFARLGVPYCS 123 Query: 122 DHDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARIDG 181 ++ Q+ Q+ +VL + KR+++LAPI+++RKGE+ K +E + GY R RID Sbjct: 124 KCGHKISKQSEDQIAQSVLREFAEKRILVLAPIVRDRKGEYRKEIEEVKLAGYPRIRIDN 183 Query: 182 EVC--DLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVADMDD 239 V D + P+L+ +KHT+E+V+DR KV D R+ + E A+ ++ G + + Sbjct: 184 IVYKFDEDEIPELKRYEKHTLEIVIDRIKVEDKYLSRITDDIERAIRITKGLVAFYEEHE 243 Query: 240 PKAEEL--------------------------------LFSANFACPICGYSMRELEPRL 267 E L L++ +C CG+S+ ++EP L Sbjct: 244 KSEEVLETQTPESTEEDTKTKKKKIKMSKQFEIDKYYKLYTTERSCANCGHSIADIEPNL 303 Query: 268 FSFNNPAGACPTCDGLGVQQYFDPDRVIQNPELSLAGGAIRGWDRRNF-----YYFQMLK 322 FSFNNP GAC C GLGV+ F ++++ L++ GA+ + + Y L+ Sbjct: 304 FSFNNPMGACTVCGGLGVEHVFTEKHILKDENLNIYEGALSCFVDDHIGFDMEYGTDELE 363 Query: 323 SLADHYKFDVEAPWGSLSANVHKVVLYGSGKENIEFKYMNDRGDTSIRRHPFEGVLHNME 382 +A YK D++ PW L+ K +LYG+ KE K R P G+L ++ Sbjct: 364 VIAKTYKIDLKKPWKDLTKTEKKYLLYGTDKEVKWRKRFWYHSKLVEERVP--GILDRLK 421 Query: 383 RRYKETESSAVREELAKFISNRPCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEF 442 Y+ ++S A F+ C C+G R+ +A V + S M+I ++ Sbjct: 422 YDYETYKNSY----YANFMDEVQCPKCKGKRINEDALSVKFNGKTISDFSSMTIEDLYDY 477 Query: 443 FNNLKLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIG 502 F LKL I I+KEI RL FLV VGL YLT+ RS+ TLSGGE+QRIRLASQIG Sbjct: 478 FTKLKLKPNEEVIGAPIVKEIIYRLTFLVKVGLTYLTIERSSPTLSGGESQRIRLASQIG 537 Query: 503 AGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGP 562 +GL GV+YVLDEPSIGLHQ DN++L+ +L LRD NTVIVVEHD++ + +D++IDIGP Sbjct: 538 SGLEGVLYVLDEPSIGLHQSDNKKLIESLKTLRDKNNTVIVVEHDKETMEESDYLIDIGP 597 Query: 563 GAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEVPKKRVPANPEKVLKLTGARGNN 622 AGV+GGEVV G E + S T +Y+ G IE+PK+R N K LK+ GA N Sbjct: 598 NAGVNGGEVVGIGDYEEFIKSDRSYTAKYLRGDDDIEIPKQRREGNG-KFLKVIGANQFN 656 Query: 623 LKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAEPAPYRDIQGLEHF 682 LK++ + P+G+F +TG+SGSGKSTL+ + L G T+ P + I+GLE+ Sbjct: 657 LKNIDVQFPLGVFIVVTGLSGSGKSTLVENILMRALHNHFYGKTLT-PGSHERIEGLENI 715 Query: 683 DKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESRARGYTPGRFSFNVRGGRCEA 742 DKVI++DQSPIGRTPRSNPATYT V +P+R+LFA ++ RGY GRFSFNV+ GRC Sbjct: 716 DKVIEVDQSPIGRTPRSNPATYTKVLSPIRDLFAATKLAKMRGYDKGRFSFNVKTGRCPT 775 Query: 743 CQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDA 802 C+G GVI++EM FL ++ VPC++C GKR+N ETL++KYK KTI++VL+M++ EA FFD Sbjct: 776 CEGAGVIELEMQFLSNVLVPCEECGGKRFNAETLDVKYKDKTIYDVLEMSVSEAIAFFDG 835 Query: 803 VPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTG 862 + ++ R L+ + D+GL YI+LGQ +TTLSGGEAQR+KLA EL K TG TLYILDEPTTG Sbjct: 836 ITSITRILKIMEDIGLGYIKLGQPSTTLSGGEAQRIKLASELHKISTGNTLYILDEPTTG 895 Query: 863 LHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPE 922 LHF DI++LL L L ++GNT++V+EHNLDVIK AD I+D+GP G GG ++ G PE Sbjct: 896 LHFEDIKKLLKALDGLVEKGNTVLVVEHNLDVIKCADHIIDMGPLSGDKGGRVVAEGKPE 955 Query: 923 TVAECEASHTARFLKPML 940 + + + S TA+ LK +L Sbjct: 956 DIIKVKESLTAKELKEIL 973 Score = 944 bits (2441), Expect = 0.0, Method: Composition-based stats. Identities = 375/964 (38%), Positives = 560/964 (58%), Gaps = 52/964 (5%) Query: 3 KIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYAR 62 + ++GA HNLKNI+L +P++++ V+TG+SGSGK+SLAFDT++ EGQRR+VESLS YAR Sbjct: 995 SLIIKGANKHNLKNISLTLPKNQINVITGVSGSGKTSLAFDTIFKEGQRRFVESLSTYAR 1054 Query: 63 QFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCPD 122 +FL E +V+ IEGL+PAI+I+QK+ S NPRSTV T+TEI+DY RL+FAR+ +P CP Sbjct: 1055 RFLGRFEDANVEKIEGLAPAIAIDQKNVSRNPRSTVATVTEIYDYFRLIFARLAKPHCPH 1114 Query: 123 HDVP--LAAQTVSQMVDNVLSQPEGKRLMLLAPII-----------KERKGEHTKTLENL 169 + L A+T S + ++ + +L++++P+ + K +E Sbjct: 1115 CNDKDTLKAETPSILATEIIDTMDLHKLVIISPLYHSSFNHRFTFDDNDAKDIKKIIEKT 1174 Query: 170 ASQGYIRARIDGEVCDLSDPPK-----LELQKKHTIEVVVDRFKVRDDLTQRLAESFETA 224 GY+R +I+ + D + L ++ +++ +V+DR V D R+A++ + A Sbjct: 1175 REAGYVRMQINNNDYVIDDITEDDIKELSKEEIYSVGIVIDRIVVGKDKRARIADAIDRA 1234 Query: 225 LELSGGTAVVADMDDPKAEELLFSANFACPICGYSMR-ELEPRLFSFNNPAGACPTCDGL 283 ++LS G A + +E + AC + G E+ PR FSFN+ G C C GL Sbjct: 1235 MDLSNGIAHIKASHGIIIKESFHTKFPACLLHGILFDFEVTPRHFSFNSHWGYCEECKGL 1294 Query: 284 GVQQYFDPDRVIQNPELSLAGGAIRG-----WDRRNFYYFQMLKSLADHYKF---DV-EA 334 G + F D I++ L GA+ + +Y L D+ + Sbjct: 1295 GSKPTFSIDLAIKDSTKPLFDGALDTAIHNMFSTPGKHYTDSLMRFLRRNGITKKDLYDT 1354 Query: 335 PWGSLSANVHKVVLYGSGKENIEFKYMNDRGDTSIRRHPFEGVLHNMERRYKETESSAVR 394 P+ L V +G + E S Sbjct: 1355 PFNELDQKVIDTFFFGGDYSVGNIITAWHSNNDVT----------------SEDYSEWKD 1398 Query: 395 EELAKFISNRPCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLK--LAGQR 452 + L KF + C SC G RL R ++N + + M++ A+ F+ L L+ + Sbjct: 1399 KSLGKFFIDEECDSCHGERLNEIIRSYTIQNKNISQVCAMTVEEAIHLFDELPNLLSERE 1458 Query: 453 AKIAEKILKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVL 512 I+++ +KEI RL FL VGL YL LSR TLSGGEAQRIRLASQ+G+ L GV+YVL Sbjct: 1459 NTISKEAIKEIRTRLSFLDKVGLGYLFLSRKYATLSGGEAQRIRLASQLGSKLTGVLYVL 1518 Query: 513 DEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVV 572 DEP++GLH RD LL TL LRDL NT+++VEHD D ++AAD+++D+GP AG GGEVV Sbjct: 1519 DEPTVGLHPRDTNHLLDTLKELRDLKNTLVIVEHDRDTMKAADNIVDMGPYAGAFGGEVV 1578 Query: 573 AEGPLEAIMAVPESLTGQYMSGKRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPV 632 +G + I+ SLTG Y+S ++K+ K V + +KL NNLK++ + +P+ Sbjct: 1579 FQGKYDDILKDDNSLTGNYLSERKKV-FEKTAVRNEETECIKLKNVSTNNLKNIDVDIPL 1637 Query: 633 GLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSP 692 +TGVSGSGKS+LI DTL+P +++ + + + + ++ I +DQ Sbjct: 1638 KKIVVVTGVSGSGKSSLIIDTLYPALKKR----RLNQYSKFESVEIPSIVSDTILVDQIS 1693 Query: 693 IGRTPRSNPATYTGVFTPVRELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVE 752 I + RS +Y+ VF +R +FA P ++A+ + PGRFS+N + GRC C+G G+ K+ Sbjct: 1694 IVGSIRSTLVSYSKVFDKIRNIFAKTPTAKAKAFAPGRFSYNGKEGRCNICEGKGIRKIA 1753 Query: 753 MHFLPDIYVPCDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQT 812 MHFL D+ + C+ C GKRYN ETL +++K I EVL++T++EA EFFD ++ + L Sbjct: 1754 MHFLSDMEIVCEACGGKRYNDETLSVRFKSLNIAEVLELTVDEAIEFFDFDKSVTKTLSI 1813 Query: 813 LMDVGLTYIRLGQSATTLSGGEAQRVKLARELS-KRGTGQTLYILDEPTTGLHFADIQQL 871 + +VGL YI+L Q T SGGE QR+KLA EL+ K+G +YILDEPTTGLHF D+ +L Sbjct: 1814 MSEVGLGYIKLSQRLDTFSGGELQRLKLATELAKKQGDEHIVYILDEPTTGLHFDDVNKL 1873 Query: 872 LDVLHKLRDQGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEASH 931 L L+KL ++G+++++IEHN DVIK AD+I+DLG EGGS GGEI+ GT E + E + + Sbjct: 1874 LIALNKLVEKGHSVIIIEHNPDVIKAADYIIDLGLEGGSNGGEIIAKGTVEEILEMKKGY 1933 Query: 932 TARF 935 T ++ Sbjct: 1934 TWKY 1937 Score = 287 bits (734), Expect = 2e-75, Method: Composition-based stats. Identities = 137/433 (31%), Positives = 199/433 (45%), Gaps = 66/433 (15%) Query: 335 PWGSLSANVHKVVLYGSGKENIEFKYMNDRGDTSIRRHPFEGVLHNMERRYKETESSAVR 394 P L A + G K F R T E + V Sbjct: 743 PIRDLFAATKLAKMRGYDKGRFSFNVKTGRCPTC--------------------EGAGVI 782 Query: 395 EELAKFISNR--PCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQR 452 E +F+SN PC C G R E V ++ + + +MS+ A+ FF+ + Sbjct: 783 ELEMQFLSNVLVPCEECGGKRFNAETLDVKYKDKTIYDVLEMSVSEAIAFFDGIT----- 837 Query: 453 AKIAEKILKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGA-GLVGVMYV 511 I LK + ++GL Y+ L + + TLSGGEAQRI+LAS++ +Y+ Sbjct: 838 ---------SITRILKIMEDIGLGYIKLGQPSTTLSGGEAQRIKLASELHKISTGNTLYI 888 Query: 512 LDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEV 571 LDEP+ GLH D ++LL L L + GNTV+VVEH+ D I+ ADH+ID+GP +G GG V Sbjct: 889 LDEPTTGLHFEDIKKLLKALDGLVEKGNTVLVVEHNLDVIKCADHIIDMGPLSGDKGGRV 948 Query: 572 VAEGPLEAIMAVPESLTGQYMSG------KRKIEVPKKRVPANPEKVLKLTGARGNNLKD 625 VAEG E I+ V ESLT + + K+K + + L + GA +NLK+ Sbjct: 949 VAEGKPEDIIKVKESLTAKELKEILKPSKKKKENIKTEETKKEENTSLIIKGANKHNLKN 1008 Query: 626 VTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAEPAPY------RDIQGL 679 ++LTLP ITGVSGSGK++L DT+F QR+ + + +++ + Sbjct: 1009 ISLTLPKNQINVITGVSGSGKTSLAFDTIFKEGQRRFVESLSTYARRFLGRFEDANVEKI 1068 Query: 680 EHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESRARGYTPGRFSFNVRGGR 739 E I IDQ + R PRS AT T ++ R +FA + + Sbjct: 1069 EGLAPAIAIDQKNVSRNPRSTVATVTEIYDYFRLIFARLAKP-----------------H 1111 Query: 740 CEACQGDGVIKVE 752 C C +K E Sbjct: 1112 CPHCNDKDTLKAE 1124 Score = 192 bits (489), Expect = 4e-47, Method: Composition-based stats. Identities = 80/200 (40%), Positives = 109/200 (54%), Gaps = 19/200 (9%) Query: 755 FLPDIYVPCDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAVP---------- 804 F D CD C G+R N + K I +V MT+EEA FD +P Sbjct: 1404 FFIDEE--CDSCHGERLNEIIRSYTIQNKNISQVCAMTVEEAIHLFDELPNLLSERENTI 1461 Query: 805 ------ALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDE 858 + +L L VGL Y+ L + TLSGGEAQR++LA +L + TG LY+LDE Sbjct: 1462 SKEAIKEIRTRLSFLDKVGLGYLFLSRKYATLSGGEAQRIRLASQLGSKLTG-VLYVLDE 1520 Query: 859 PTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVS 918 PT GLH D LLD L +LRD NT+V++EH+ D +K AD IVD+GP G+ GGE++ Sbjct: 1521 PTVGLHPRDTNHLLDTLKELRDLKNTLVIVEHDRDTMKAADNIVDMGPYAGAFGGEVVFQ 1580 Query: 919 GTPETVAECEASHTARFLKP 938 G + + + + S T +L Sbjct: 1581 GKYDDILKDDNSLTGNYLSE 1600 Score = 178 bits (451), Expect = 1e-42, Method: Composition-based stats. Identities = 68/208 (32%), Positives = 118/208 (56%), Gaps = 18/208 (8%) Query: 389 ESSAVREELAKFISNRP--CASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNL 446 E +R+ F+S+ C +C G R E V ++ + + ++++ A+EFF+ Sbjct: 1745 EGKGIRKIAMHFLSDMEIVCEACGGKRYNDETLSVRFKSLNIAEVLELTVDEAIEFFD-- 1802 Query: 447 KLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIG--AG 504 K + L + VGL Y+ LS+ +T SGGE QR++LA+++ G Sbjct: 1803 ------------FDKSVTKTLSIMSEVGLGYIKLSQRLDTFSGGELQRLKLATELAKKQG 1850 Query: 505 LVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGA 564 ++Y+LDEP+ GLH D +LL L L + G++VI++EH+ D I+AAD++ID+G Sbjct: 1851 DEHIVYILDEPTTGLHFDDVNKLLIALNKLVEKGHSVIIIEHNPDVIKAADYIIDLGLEG 1910 Query: 565 GVHGGEVVAEGPLEAIMAVPESLTGQYM 592 G +GGE++A+G +E I+ + + T +Y+ Sbjct: 1911 GSNGGEIIAKGTVEEILEMKKGYTWKYI 1938 Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats. Identities = 41/114 (35%), Positives = 69/114 (60%), Gaps = 10/114 (8%) Query: 2 DKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYA 61 + I+++ T+NLKNI++ IP K++VVTG+SGSGKSSL DTLY ++R + S + Sbjct: 1616 ECIKLKNVSTNNLKNIDVDIPLKKIVVVTGVSGSGKSSLIIDTLYPALKKRRLNQYSKF- 1674 Query: 62 RQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARV 115 +E P + +S I ++Q S + RST+ + +++ D +R +FA+ Sbjct: 1675 ----ESVEIPSI-----VSDTILVDQISIVGSIRSTLVSYSKVFDKIRNIFAKT 1719 >UniRef50_B6YRR0 Excinuclease ABC subunit A n=1 Tax=Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 RepID=B6YRR0_AZOPC Length = 943 Score = 1140 bits (2948), Expect = 0.0, Method: Composition-based stats. Identities = 447/937 (47%), Positives = 633/937 (67%), Gaps = 10/937 (1%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 63 I+++GAR HNLKNIN+ IPR+ V+TGLSGSGKSSLAFDTL+ EGQRRY+++ S YAR Sbjct: 10 IDIQGARVHNLKNINVTIPRNSFTVITGLSGSGKSSLAFDTLFVEGQRRYIDTFSVYARS 69 Query: 64 FLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCPDH 123 FL +E+PDVD I GLSP ISIEQK+T+ +PRSTVGT+TEI+DYLRLLFARVGE Sbjct: 70 FLHNVERPDVDRITGLSPVISIEQKTTNRSPRSTVGTMTEIYDYLRLLFARVGEAYSYIS 129 Query: 124 DVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARIDGEV 183 + T +++ ++S+ GK++ LL+PI+K RKG + + E A +G++ RIDG++ Sbjct: 130 GEKMVKYTEEHILELIISRYNGKKVYLLSPIVKNRKGHYRELFEQFAKRGFLNVRIDGKL 189 Query: 184 CDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVADMDDPKAE 243 ++ +L+ K H++EVV+D+ + D +R+ +S TA+ S G +V +++ Sbjct: 190 KEIIPALRLDRYKYHSVEVVIDKLLITDKDKKRIKKSVYTAMNYSDGLLMVLELE--SGN 247 Query: 244 ELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPELSLA 303 FS + CP G S + P FSFN+P GAC C G G D + ++ +PELS+ Sbjct: 248 VSYFSRHLMCPSTGLSYNDPAPHNFSFNSPHGACSKCKGTGQINEIDKNLIMPHPELSIY 307 Query: 304 GGAIRGWDR-RNFYYFQMLKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKENIEFKYMN 362 G I + R F L+ Y D+ S ++ G E I Sbjct: 308 QGGIAPLGKYREILIFNQLEITLKKYGIDLHTSLKDFSEEAINDIMNGV-TEQISIHSDA 366 Query: 363 DRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGTRLRREARHVY 422 +++ FEG+ + + ++ S + + KFI+ C C G RL +EA H Sbjct: 367 AYSNSNHCLSSFEGIYKYILIQKEQGSSRSATQWATKFITTAICPECNGQRLNKEALHYR 426 Query: 423 VENTPLPAISDMSIGHAMEFFN--NLKLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTL 480 + + ++ + I + N L L + +IA +ILKEI R +FL+N+GLNYLTL Sbjct: 427 INGKNIADLTSLEIPELFNWINTTELCLNKYQKQIAIEILKEIRTRTQFLLNIGLNYLTL 486 Query: 481 SRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNT 540 +RS+ +LSGGE QRIRLA+QIG+ LV V+Y+LDEPSIGLHQRDN RL+G L LRD+GN+ Sbjct: 487 NRSSASLSGGEGQRIRLATQIGSQLVNVLYILDEPSIGLHQRDNIRLIGALKQLRDIGNS 546 Query: 541 VIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEV 600 VIVVEHD++ I AD+++++GP AG GGE+V G E ++ +LT Y+S K+ I + Sbjct: 547 VIVVEHDKEMIMNADYIVELGPKAGKLGGEIVFTGTPEELLK-KNTLTASYISEKKNILI 605 Query: 601 PKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQR 660 KKR +K + L GA GNNLK+V + P+G F CITGVSGSGKSTLIN+TL PI + Sbjct: 606 SKKR--KGNKKNIFLKGASGNNLKNVDIIFPLGKFICITGVSGSGKSTLINETLQPIISQ 663 Query: 661 QLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPE 720 +L + + EP PY+ I+G+E+ DK++++DQSPIGRT RSNPATY G+F+ +R LF + E Sbjct: 664 KLYNS-LKEPLPYQSIEGIENLDKIVNVDQSPIGRTFRSNPATYIGIFSEIRNLFTELTE 722 Query: 721 SRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKY 780 S+ +GY PG FSFN++GGRCE C+G+G +EM+FLP++YVPC+QC+GKRYN+ L I Y Sbjct: 723 SKIKGYKPGHFSFNIKGGRCEVCKGNGYKTIEMNFLPNVYVPCEQCQGKRYNQAILGILY 782 Query: 781 KGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKL 840 KGK+I +VL+MTI +A EFF P++ K++ L +VGL YI LGQ +TTLSGGE+QR+KL Sbjct: 783 KGKSIADVLNMTINQAIEFFKYFPSINNKIKVLQEVGLGYICLGQPSTTLSGGESQRIKL 842 Query: 841 ARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADW 900 A ELSK+ TG+TLYILDEPTTGLHF DI+ LL+V+++L ++ NT+++IEHN++VIK+AD+ Sbjct: 843 ATELSKQDTGKTLYILDEPTTGLHFEDIRVLLEVINRLVNRKNTVIIIEHNMEVIKSADY 902 Query: 901 IVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLK 937 ++D+GPEGG GGEIL +GTPE + + + +T+ F + Sbjct: 903 VIDMGPEGGRDGGEILFAGTPEQLIQSKKGYTSHFFR 939 Score = 103 bits (256), Expect = 4e-20, Method: Composition-based stats. Identities = 43/123 (34%), Positives = 62/123 (50%), Gaps = 6/123 (4%) Query: 605 VPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQL-- 662 + + GAR +NLK++ +T+P FT ITG+SGSGKS+L DTLF QR+ Sbjct: 2 TKDKNTACIDIQGARVHNLKNINVTIPRNSFTVITGLSGSGKSSLAFDTLFVEGQRRYID 61 Query: 663 ----NGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGV 718 + D+ + VI I+Q R+PRS T T ++ +R LFA V Sbjct: 62 TFSVYARSFLHNVERPDVDRITGLSPVISIEQKTTNRSPRSTVGTMTEIYDYLRLLFARV 121 Query: 719 PES 721 E+ Sbjct: 122 GEA 124 Score = 101 bits (253), Expect = 1e-19, Method: Composition-based stats. Identities = 36/123 (29%), Positives = 58/123 (47%), Gaps = 9/123 (7%) Query: 2 DKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYA-EGQRRYVESLSAY 60 I ++GA +NLKN++++ P K I +TG+SGSGKS+L +TL Q+ Y Sbjct: 614 KNIFLKGASGNNLKNVDIIFPLGKFICITGVSGSGKSTLINETLQPIISQKLYNSLKEPL 673 Query: 61 ARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRC 120 Q ++ IE L ++++Q RS T I +R LF + E + Sbjct: 674 PYQ--------SIEGIENLDKIVNVDQSPIGRTFRSNPATYIGIFSEIRNLFTELTESKI 725 Query: 121 PDH 123 + Sbjct: 726 KGY 728 >UniRef50_B8DJB0 Excinuclease ABC, A subunit n=2 Tax=Desulfovibrio RepID=B8DJB0_DESVM Length = 1131 Score = 1138 bits (2944), Expect = 0.0, Method: Composition-based stats. Identities = 458/990 (46%), Positives = 631/990 (63%), Gaps = 62/990 (6%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 63 I + GAR HNLKN+ L IPRD+L+VV G SGSGKS+LAFD +YAEGQRRYVESLSAYARQ Sbjct: 6 IHIEGARQHNLKNVTLDIPRDELVVVCGPSGSGKSTLAFDIVYAEGQRRYVESLSAYARQ 65 Query: 64 FLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCPDH 123 FL M+KP+V+ IEGLSPAIS+EQ++ + NPRSTVGT+TE++D+LR+ +AR+G CP Sbjct: 66 FLPQMDKPEVEKIEGLSPAISLEQQTATRNPRSTVGTVTEVYDFLRVFWARLGRMYCPQC 125 Query: 124 DVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARIDGEV 183 +P+ A+ +++ ++L+ EG R ++LAP+++ +KG H + L ++G++R R++G + Sbjct: 126 GLPIEARAADEIIADILALGEGTRCIVLAPLVEYQKGTHIDRFKKLKAEGFVRVRVNGAI 185 Query: 184 CDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVADMDDP--- 240 + + P L+ +KHTI++VVDR ++D + RLA+S E AL G VV + Sbjct: 186 MGIDEVPALDKNRKHTIDLVVDRLVIKDGIRGRLADSVELALRYGDGRLVVHLPAEGTGG 245 Query: 241 -------------KAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQ 287 +++ S CP+C S+ P+LFSFN+P GACP C GLG + Sbjct: 246 KDGKDAGDGKGGNAGRDIVHSTESVCPVCRISLPAPSPQLFSFNSPQGACPRCLGLGSVE 305 Query: 288 YFDPDRVIQNPELSLAGGAIRGWDRRNF--YYFQMLKSLADHYKFDVEAPWGSLSANVHK 345 YF+P V N LSL GA+ W + L +L + F + P + SA+ Sbjct: 306 YFEPALVAPNRGLSLNTGALLPWKNTKLFERHRDALTALGKRWGFTLSTPLAAYSADALD 365 Query: 346 VVLYGSGKENIE----------------------------FKYMNDRGDT---------- 367 + +G ++ +D G Sbjct: 366 ALFHGETEDGRPAGRGAGSNLRRNWLGGSVVVGGNGNGENAGNGHDHGPALPVTPAAANG 425 Query: 368 -SIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGTRLRREARHVYVENT 426 ++ + GV+ +E+ + A RE L+++ + C C G RLR E+ V V++ Sbjct: 426 GAVTADRWPGVVSILEQGMQ--YGDAWRELLSRYRQSMACPVCSGARLRPESLSVRVDSL 483 Query: 427 PLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTLSRSAET 486 + MS+ A+++ + G+ A +AE ++KE+ RL+F+VNVGL+Y+ L R+ T Sbjct: 484 NIHEFCSMSVARALDWLRERRFEGRHALVAEPLMKELHHRLEFMVNVGLDYIALGRNMAT 543 Query: 487 LSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEH 546 LSGGEAQRIRLASQ+G+GLVGV YVLDEPSIGLH RDNERL+ TL L+ GNTV+VVEH Sbjct: 544 LSGGEAQRIRLASQLGSGLVGVTYVLDEPSIGLHPRDNERLIKTLRSLQRRGNTVLVVEH 603 Query: 547 DEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEVPKKRVP 606 DE IR AD VI++GPG+G GGEVV GP++ +++ +SLT QY+ G I P+ R Sbjct: 604 DEATIREADTVIELGPGSGALGGEVVFNGPVDTLLSSSQSLTAQYLRGDMAIARPRARRA 663 Query: 607 ANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGAT 666 + L G NNL+ + +P+GL TC+TGVSGSGKS+L+ DTL+ G Sbjct: 664 PRG--WMTLHGVTTNNLQGIDCRVPLGLLTCVTGVSGSGKSSLVMDTLYKHLA-LAQGIR 720 Query: 667 IAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESRARGY 726 + +P I+G E ++++ IDQ+PIGRTPRSNPATYT +F +R +FA P++R RGY Sbjct: 721 VDQPGTIEGIEGAETIERIVSIDQTPIGRTPRSNPATYTKIFDEIRGIFAMTPDARKRGY 780 Query: 727 TPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKYKGKTIH 786 PGRFSFNVRGGRCEAC GDG I+VEMHFLPD+YV CD CKG+RYN ETLE++YKG I Sbjct: 781 KPGRFSFNVRGGRCEACGGDGQIRVEMHFLPDVYVTCDVCKGRRYNHETLEVRYKGLNIA 840 Query: 787 EVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSK 846 EVLD+T+ +AR+FF+ P L R+L L DVGL Y+RLGQ ATTLSGGEAQR+K++REL K Sbjct: 841 EVLDLTVRQARQFFENYPVLERRLGVLEDVGLEYLRLGQPATTLSGGEAQRIKISRELGK 900 Query: 847 RGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADWIVDLGP 906 R T+YILDEPTTGLH ++ +L+ VL++L D+G T+ VIEHN DVI +D +VDLGP Sbjct: 901 RSLPGTMYILDEPTTGLHMHEVGKLITVLNQLVDRGATVTVIEHNTDVILASDHVVDLGP 960 Query: 907 EGGSGGGEILVSGTPETVAECEASHTARFL 936 GG GG I+ +GTPE + + S T FL Sbjct: 961 GGGENGGRIVSAGTPEEIMDDPHSVTGSFL 990 Score = 177 bits (450), Expect = 2e-42, Method: Composition-based stats. Identities = 68/191 (35%), Positives = 111/191 (58%), Gaps = 15/191 (7%) Query: 761 VPCDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDA--------------VPAL 806 + C C G R E+L ++ IHE M++ A ++ + L Sbjct: 461 MACPVCSGARLRPESLSVRVDSLNIHEFCSMSVARALDWLRERRFEGRHALVAEPLMKEL 520 Query: 807 ARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFA 866 +L+ +++VGL YI LG++ TLSGGEAQR++LA +L G T Y+LDEP+ GLH Sbjct: 521 HHRLEFMVNVGLDYIALGRNMATLSGGEAQRIRLASQLGSGLVGVT-YVLDEPSIGLHPR 579 Query: 867 DIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAE 926 D ++L+ L L+ +GNT++V+EH+ I+ AD +++LGP G+ GGE++ +G +T+ Sbjct: 580 DNERLIKTLRSLQRRGNTVLVVEHDEATIREADTVIELGPGSGALGGEVVFNGPVDTLLS 639 Query: 927 CEASHTARFLK 937 S TA++L+ Sbjct: 640 SSQSLTAQYLR 650 Score = 177 bits (448), Expect = 2e-42, Method: Composition-based stats. Identities = 83/228 (36%), Positives = 121/228 (53%), Gaps = 19/228 (8%) Query: 403 NRPCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKE 462 C C+G R E V + + + D+++ A +FF N + Sbjct: 814 YVTCDVCKGRRYNHETLEVRYKGLNIAEVLDLTVRQARQFFENYPV-------------- 859 Query: 463 IGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIG-AGLVGVMYVLDEPSIGLHQ 521 + RL L +VGL YL L + A TLSGGEAQRI+++ ++G L G MY+LDEP+ GLH Sbjct: 860 LERRLGVLEDVGLEYLRLGQPATTLSGGEAQRIKISRELGKRSLPGTMYILDEPTTGLHM 919 Query: 522 RDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIM 581 + +L+ L L D G TV V+EH+ D I A+DHV+D+GPG G +GG +V+ G E IM Sbjct: 920 HEVGKLITVLNQLVDRGATVTVIEHNTDVILASDHVVDLGPGGGENGGRIVSAGTPEEIM 979 Query: 582 AVPESLTGQYM---SGKRKIEVPKKRVPANPEKV-LKLTGARGNNLKD 625 P S+TG ++ R VP RVP +++ G ++ D Sbjct: 980 DDPHSVTGSFLVQEHATRHPGVPMPRVPVAAAPAPIQIPGLDAPSVGD 1027 Score = 90.8 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 35/116 (30%), Positives = 57/116 (49%), Gaps = 6/116 (5%) Query: 609 PEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIA 668 + + + GAR +NLK+VTL +P + G SGSGKSTL D ++ QR+ + A Sbjct: 2 SKPCIHIEGARQHNLKNVTLDIPRDELVVVCGPSGSGKSTLAFDIVYAEGQRRYVESLSA 61 Query: 669 EPAPYR------DIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGV 718 + +++ +E I ++Q R PRS T T V+ +R +A + Sbjct: 62 YARQFLPQMDKPEVEKIEGLSPAISLEQQTATRNPRSTVGTVTEVYDFLRVFWARL 117 >UniRef50_Q83NI8 Excinuclease ABC subunit A n=2 Tax=Tropheryma whipplei RepID=Q83NI8_TROW8 Length = 948 Score = 1132 bits (2928), Expect = 0.0, Method: Composition-based stats. Identities = 460/964 (47%), Positives = 642/964 (66%), Gaps = 50/964 (5%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 63 + V+ AR HNLKN+N+ IPR+ + V TGLSGSGKSSLAFDT++AEGQRRY+ESLSAYARQ Sbjct: 8 LRVKNARVHNLKNLNVRIPRNSMTVFTGLSGSGKSSLAFDTIFAEGQRRYIESLSAYARQ 67 Query: 64 FLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCPDH 123 FL +++P+VD I+GLSP+++I+QK+TS NPRSTVGT+TEI DYLRLL+ARVG CP+ Sbjct: 68 FLERLDRPEVDSIDGLSPSVAIDQKTTSRNPRSTVGTVTEIFDYLRLLWARVGVLHCPEC 127 Query: 124 DVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARIDGEV 183 D+P+ QT+ Q+VD++ P G+R MLL+P+++++KGE L + G+ R +D E+ Sbjct: 128 DLPVQKQTIQQIVDSIAKIPHGERFMLLSPLVRQKKGEFVDLFSRLTTSGFSRVVVDEEI 187 Query: 184 CDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVADMDDPKAE 243 L++ PKL+ +HTI+VVVDR D++ RL +S ETA G + + ++ K + Sbjct: 188 YLLTEVPKLKKNSRHTIKVVVDRLVSEDNMLTRLTDSIETAF----GLSNICEVQTFKGD 243 Query: 244 ELLFSANFACPICGY-SMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPELSL 302 FS N ACP + + ++EPR FSFN+P GACP CDG+G + + ++ + +LS+ Sbjct: 244 VFRFSINSACPNLHFLNFDKIEPRTFSFNSPVGACPDCDGIGTVRSVNMTTLVPDTQLSV 303 Query: 303 AGGAIRGWDRR--NFYYFQMLKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKENIEFKY 360 A+ D++ + + + + +LA + KF + PW L+ V +L+ Sbjct: 304 EKIALDLIDKKIVSKNFMREMSALARNLKFTLNTPWSDLTDYVQNTILH----------- 352 Query: 361 MNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGTRLRREARH 420 + + R + G++ +ER E + L+ ++ N PC SC G RLR + Sbjct: 353 AKNFLLHNTRVRYYTGLVRKIERDVSENSGGS----LSGYLYNSPCRSCSGKRLRASSLC 408 Query: 421 VYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTL 480 V V N + + DM + + FF L + + KI+ IL+EI RL+FL+ +GL YLTL Sbjct: 409 VKVSNKNIIDVCDMPLDGILHFFKALDIPRKFEKISSPILREIISRLEFLIELGLGYLTL 468 Query: 481 SRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNT 540 SRS T+SGGE+QRIRLA+QIG+GL V+YVLDEPSIGLH+RDNE+L+ L++LR+ GNT Sbjct: 469 SRSITTISGGESQRIRLATQIGSGLTEVLYVLDEPSIGLHKRDNEKLIKLLLNLRNRGNT 528 Query: 541 VIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEV 600 +IVVEHDE+ IR++D ++DIGPGAG GG+VV GP+ + SLTG+Y+SG+ + Sbjct: 529 LIVVEHDEETIRSSDWIVDIGPGAGRMGGQVVYSGPVGKM--PSRSLTGKYLSGELMVST 586 Query: 601 PKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQR 660 PKKR ++ + L+GA+ NNLK++T+ P+ F ITGVSGSGKSTL+N L Sbjct: 587 PKKRRVSSCG--ITLSGAKENNLKNITVFFPLKTFIVITGVSGSGKSTLVNSVLCKALSN 644 Query: 661 QLNGATIAEPAPYRD------------------------IQGLEHFDKVIDIDQSPIGRT 696 G T +E + G E+ KV+ IDQ PIGRT Sbjct: 645 ICKGNTPSENNCQDADCTDACTVRNGMQHNEQTVRLAPALDGAENISKVVHIDQKPIGRT 704 Query: 697 PRSNPATYTGVFTPVRELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFL 756 PRSN ATYTGVF +R++F+ P +RARGY+PGRFSFN++GGRCE C+GDG IK+EM+FL Sbjct: 705 PRSNLATYTGVFDKIRDIFSKTPTARARGYSPGRFSFNLKGGRCEKCKGDGCIKIEMNFL 764 Query: 757 PDIYVPCDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDV 816 PD+YV C+ C G RYNR+TL++ Y +IH+VL M + EA EFF A+P++ + L+ + ++ Sbjct: 765 PDVYVDCEDCNGMRYNRDTLQVLYNNMSIHDVLTMPVCEAVEFFRAIPSIHQPLKLMDEI 824 Query: 817 GLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLH 876 GL Y+ LGQ A TLSGGEAQR+KLA +L KR LY+LDEPTTGLHF D++QLL++LH Sbjct: 825 GLGYMTLGQPAPTLSGGEAQRIKLAAQLQKRTAQDVLYVLDEPTTGLHFHDVRQLLEILH 884 Query: 877 KLRDQGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFL 936 +L D GNT++VIEHNLDVIKTAD ++D+GPEGG+ GG ++ GTPE VA S T FL Sbjct: 885 RLVDNGNTVIVIEHNLDVIKTADHVIDMGPEGGNAGGSVVACGTPEEVALHPDSATGYFL 944 Query: 937 KPML 940 K L Sbjct: 945 KKCL 948 Score = 99.6 bits (247), Expect = 5e-19, Method: Composition-based stats. Identities = 37/115 (32%), Positives = 58/115 (50%), Gaps = 6/115 (5%) Query: 610 EKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAE 669 L++ AR +NLK++ + +P T TG+SGSGKS+L DT+F QR+ + A Sbjct: 5 RSFLRVKNARVHNLKNLNVRIPRNSMTVFTGLSGSGKSSLAFDTIFAEGQRRYIESLSAY 64 Query: 670 PAPYR------DIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGV 718 + ++ ++ + IDQ R PRS T T +F +R L+A V Sbjct: 65 ARQFLERLDRPEVDSIDGLSPSVAIDQKTTSRNPRSTVGTVTEIFDYLRLLWARV 119 >UniRef50_Q30RE0 Excinuclease ABC subunit A n=21 Tax=Campylobacterales RepID=Q30RE0_SULDN Length = 942 Score = 1127 bits (2915), Expect = 0.0, Method: Composition-based stats. Identities = 475/951 (49%), Positives = 635/951 (66%), Gaps = 29/951 (3%) Query: 2 DKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYA 61 D I++ GAR +NLKNI+L IP+++L+V TGLSGSGKS+LAFDTLYAEGQRRY+ESLS+YA Sbjct: 5 DVIKIVGARENNLKNISLEIPKNQLVVFTGLSGSGKSTLAFDTLYAEGQRRYMESLSSYA 64 Query: 62 RQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCP 121 RQFL + KPDVD IEGL+PAI+I+QK+TS NPRSTVGTITEI+DYLRLL+ARVG C Sbjct: 65 RQFLDRVGKPDVDKIEGLTPAIAIDQKTTSKNPRSTVGTITEIYDYLRLLYARVGIQHCH 124 Query: 122 DHDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARIDG 181 + ++ + S ++ V P+G +L+LLAPI+ E+KG + LE+L +GY+RA IDG Sbjct: 125 NCGKEISQMSASDIIGEVAKLPQGAKLVLLAPIVNEKKGTYADVLESLVHKGYVRAMIDG 184 Query: 182 EVCDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVADMDDP- 240 + L + +L KKHTI+VV+DR V + +R+A E AL+ S G + ++ Sbjct: 185 VMVRLDEEIELSKTKKHTIKVVIDRVVVNEQNKERIAADVEKALKESYGELEIEILNHEE 244 Query: 241 ---KAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQN 297 + +S + AC C S LEP FSFN+P GAC CDGLG++ D D++I + Sbjct: 245 LGLGRSHMHYSEHNACFDCKVSFEPLEPLSFSFNSPKGACKECDGLGLRYALDQDKII-D 303 Query: 298 PELSLAGGAIRG-WDRRNFYYFQMLKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKENI 356 +LS+ GAI+ + YYF LK K D P+ L K +L+G G + Sbjct: 304 IDLSVEKGAIKIIYGFNKGYYFTFLKGFCAQNKIDTTIPYSELEEYQKKAILHG-GIDEA 362 Query: 357 EFKYMNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGTRLRR 416 F + + + G++ +K+ +ELA ++S + C+ C RL+R Sbjct: 363 SFLWKGH-----EVKRVWPGIIKIAYDMFKDE------KELADYMSEKKCSVCSSHRLKR 411 Query: 417 EARHVYVENTPLPAISDMSIGHAMEFFNNLK----LAGQRAKIAEKILKEIGDRLKFLVN 472 E+ V V + I DM I + E+F Q A+++ IL EI +RL FL + Sbjct: 412 ESLSVRVAGKGIADILDMPISKSYEWFKEKSNFNYFTDQSAQVSAPILNEIRERLYFLFD 471 Query: 473 VGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLI 532 VGL Y+TL R A T+SGGEAQRIR+ASQIG+GL GV+YVLDEPSIGLH+RD +L+ TL Sbjct: 472 VGLGYITLGRDARTISGGEAQRIRIASQIGSGLTGVLYVLDEPSIGLHERDTLKLIRTLR 531 Query: 533 HLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYM 592 L++ GN+VIVVEHD++ I AD ++DIG GAG GGEVV G L+ + ++LT Y+ Sbjct: 532 SLQEKGNSVIVVEHDKETIENADFIVDIGSGAGKFGGEVVFAGTLDKLKKA-KTLTADYL 590 Query: 593 SGKRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLIND 652 G++KIE +R +K +++ NN+ ++ + +P+ F CITGVSGSGKS+L+ Sbjct: 591 YGRKKIEYFYRRA---QDKFIEIKNVTLNNINNLNVKIPLNNFVCITGVSGSGKSSLMLQ 647 Query: 653 TLFPIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVR 712 TL P A+ LN A +I GLEH DKVI +DQSPIGRTPRSNPATYTG+ +R Sbjct: 648 TLLPTARELLNHARKVNKVAGVEINGLEHVDKVIYLDQSPIGRTPRSNPATYTGLMDEIR 707 Query: 713 ELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYN 772 LF E++ RGYT RFSFNVRGGRCE CQG+G K+EMHFLPDI V CD C G RYN Sbjct: 708 NLFEQTKEAQIRGYTSSRFSFNVRGGRCEKCQGEGENKIEMHFLPDIMVKCDTCNGTRYN 767 Query: 773 RETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSG 832 ++TLE+ YKGK I +VL+M++EEA EFF A+P L + L TL+DVGL YI LGQ+A TLSG Sbjct: 768 QQTLEVYYKGKNISDVLNMSVEEAYEFFKAIPKLNQILSTLVDVGLGYITLGQNAVTLSG 827 Query: 833 GEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNL 892 GEAQR+KL++ELS++ TG+TLYILDEPTTGLHFAD+ +L VLHK + GN++++IEHNL Sbjct: 828 GEAQRIKLSKELSRKDTGKTLYILDEPTTGLHFADVDRLTGVLHKFVELGNSVLIIEHNL 887 Query: 893 DVIKTADWIVDLGPEGGSGGGEILVSGTPETVAEC---EASHTARFLKPML 940 D+IK AD+I+D+GPEGGSGGG I+ G PE VA+ S+T +L L Sbjct: 888 DMIKNADYIIDMGPEGGSGGGLIIAEGNPEEVAKNHKKSGSYTGEYLAKEL 938 Score = 108 bits (271), Expect = 7e-22, Method: Composition-based stats. Identities = 43/116 (37%), Positives = 61/116 (52%), Gaps = 6/116 (5%) Query: 609 PEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIA 668 V+K+ GAR NNLK+++L +P TG+SGSGKSTL DTL+ QR+ + + Sbjct: 3 NRDVIKIVGARENNLKNISLEIPKNQLVVFTGLSGSGKSTLAFDTLYAEGQRRYMESLSS 62 Query: 669 EPAPYRDIQGLEHFDKV------IDIDQSPIGRTPRSNPATYTGVFTPVRELFAGV 718 + D G DK+ I IDQ + PRS T T ++ +R L+A V Sbjct: 63 YARQFLDRVGKPDVDKIEGLTPAIAIDQKTTSKNPRSTVGTITEIYDYLRLLYARV 118 >UniRef50_Q1PVF8 Strongly similar to exinuclease ABC, protein A n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1PVF8_9BACT Length = 941 Score = 1121 bits (2901), Expect = 0.0, Method: Composition-based stats. Identities = 412/960 (42%), Positives = 587/960 (61%), Gaps = 43/960 (4%) Query: 2 DKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYA 61 I G R HNLKNI++ IP +KL+V+TG+SGSGKSSLAFDTL+AEGQRRYVES SAYA Sbjct: 3 HSIVACGIRVHNLKNIDVEIPHNKLVVITGVSGSGKSSLAFDTLFAEGQRRYVESFSAYA 62 Query: 62 RQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCP 121 RQFL M+KPDVDHIEG+ PAI+I+QK+ N RSTVGT TEI+DYLRLL+AR+G+ C Sbjct: 63 RQFLEKMDKPDVDHIEGILPAIAIQQKNPVKNRRSTVGTATEINDYLRLLYARIGKTYCK 122 Query: 122 DHDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARIDG 181 + TVS +V+ +LS PEG + ++ P+ +K + + L +G +R D Sbjct: 123 SCKRQVRIDTVSHIVEFILSLPEGTKFLVTFPLNISQKISGEEQINLLKERGIVRILADN 182 Query: 182 EVCDLSDPP-KLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVADMDDP 240 ++ D+++ +++ T+ ++DR V+ + RL +S ET+ + G + +D Sbjct: 183 DIVDITNEQNSFDIRAAKTVYGIIDRLVVKYTIKDRLIDSLETSYRMGSGHLSIFYTNDA 242 Query: 241 -------------------KAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCD 281 E+ +S F C C E P LFSFNNP GACP C Sbjct: 243 LSSEAIKPSTDDLVRIQDSPWVEMKYSKKFFCSYCAIEYPEPSPALFSFNNPIGACPKCQ 302 Query: 282 GLGVQQYFDPDRVIQNPELSLAGGAIRGWDRRNFYY-FQMLKSLADHYKFDVEAPWGSLS 340 G G D D VI + E SL GAI W+ + ++ L+S A Y ++ P+ L+ Sbjct: 303 GFGHTIDIDMDAVIPDKEKSLEQGAIVPWNTPAYRELYEELESAASKYDIPMDVPFRKLT 362 Query: 341 ANVHKVVLYGSGKENIEFKYMNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKF 400 ++ G+ F G+ VR L+K+ Sbjct: 363 KKQLNLLFEGTKD--------------------FCGINEFFNWLEGRKYKIHVRVILSKY 402 Query: 401 ISNRPCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKIL 460 C +CEGTRL++EA + ++ + + M+I A FF L+L+ IA IL Sbjct: 403 RGYNVCRTCEGTRLKKEALTIVIQQRSIAEVCTMTIEQAHMFFQKLQLSDYERNIAHLIL 462 Query: 461 KEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLH 520 +EI RL +++ VGL YLTL R TLSGGEAQR+ L + +G+ LV +Y+LDEPS+GLH Sbjct: 463 QEITKRLGYMIKVGLGYLTLDRMTRTLSGGEAQRVNLTTSLGSSLVNTLYILDEPSVGLH 522 Query: 521 QRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAI 580 RD +RL+ L LRD+GNTV+VVEHD + I+ +D +ID+GPGAG +GG +V G + Sbjct: 523 PRDTDRLIHILTRLRDIGNTVVVVEHDAEVIKNSDMIIDLGPGAGENGGRLVYHGTFAQL 582 Query: 581 MAVPESLTGQYMSGKRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITG 640 A SLTGQY+ G++ I++P R K + L GA NNLK++ +T P+ + C+TG Sbjct: 583 PANNCSLTGQYLKGEKAIKIPSSRRKP-SRKAIVLKGASQNNLKNIDVTFPLNMLVCVTG 641 Query: 641 VSGSGKSTLINDTLFPIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSN 700 VSGSGKSTL+ DTL+ +++L G + I+G + ++ +DQSPIGRTPRSN Sbjct: 642 VSGSGKSTLVQDTLYGALKKKL-GIYSGFVGKHTAIEGERFINDILLVDQSPIGRTPRSN 700 Query: 701 PATYTGVFTPVRELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIY 760 P TY +F +R+LFA E++AR T G FSFN+ GGRCE C+G G +KV+M FL DI+ Sbjct: 701 PVTYIKIFDEIRKLFAFTREAKARKLTIGSFSFNIAGGRCEFCEGAGYVKVDMQFLADIF 760 Query: 761 VPCDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTY 820 V C++C GKR+N++ LE+KYK K IHEVL +T++EA EFF + + L+ L + GL Y Sbjct: 761 VTCEKCGGKRFNKKVLEVKYKNKNIHEVLSITVDEAIEFFRESVNITKVLKCLQETGLGY 820 Query: 821 IRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRD 880 ++LGQ ATTLSGGEAQR+K++ +S+ L++ DEPT GLH DIQ+LL+ +L Sbjct: 821 LKLGQPATTLSGGEAQRLKVSTYISQENMESMLFVFDEPTIGLHMDDIQKLLNCFQRLLQ 880 Query: 881 QGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLKPML 940 G++++V+EHNLD+IK++D+I+DLGPEGG+ GG ++ GTPE +++ + SHT +LKP Sbjct: 881 AGHSLIVVEHNLDIIKSSDYIIDLGPEGGNEGGYVIGCGTPEKISKIKTSHTGAYLKPYF 940 >UniRef50_C2NRS3 Excinuclease ABC, A subunit n=2 Tax=Bacillus cereus group RepID=C2NRS3_BACCE Length = 1274 Score = 1121 bits (2899), Expect = 0.0, Method: Composition-based stats. Identities = 440/954 (46%), Positives = 626/954 (65%), Gaps = 18/954 (1%) Query: 1 MDKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAY 60 +DKI + GAR HNLKNINL IP+++L+V TG+SGSGKS+L FDT++AE QRR+V LS Y Sbjct: 320 LDKILIEGARHHNLKNINLSIPKNRLVVFTGVSGSGKSTLVFDTIFAEAQRRFVVGLSPY 379 Query: 61 ARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRC 120 R++L +E+P +D I GLSPAI+IEQKS S+NPRSTVGTITEI YLRLL++RVG P C Sbjct: 380 VRKYLDKVERPKLDSIYGLSPAIAIEQKSVSNNPRSTVGTITEISSYLRLLYSRVGIPEC 439 Query: 121 PDHDVPLAAQTVSQMVDNVLS-QPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARI 179 + QT + ++ S P + L APII + + N+ +GY + RI Sbjct: 440 IKCGTTIYPQTPRDIASSIYSYLPSNREFKLYAPIIIDSYVDSEYMFTNIRKEGYTQIRI 499 Query: 180 DGEVCDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALE-----LSGGTAVV 234 + E+ + D + K +I++V + F++ + L E F L L T Sbjct: 500 NQELKSIDDIEFINSDKAVSIDLVGETFRIPNKLEGFKKEEFINKLTNAIKVLQKVTKHT 559 Query: 235 ADMDDPKAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRV 294 +++ + +LF+ CP C EL + FSFN P G CP C+GLGV+Q DP+ + Sbjct: 560 LNIETEDNQIILFTTELLCPSCHSGFPELSSQHFSFNTPLGMCPDCNGLGVRQNIDPNLL 619 Query: 295 IQNPELSLAGGAIRGWDR-----RNFYYFQMLKSLADHYKFDVEAPWGSLSANVHKVVLY 349 ++NP LS+ GA+R + + + L + HY D+E PW L + H V+ Y Sbjct: 620 VENPNLSILDGALRWFGNLREGNKTTWPTGPLDVVYKHYNLDIETPWKDLPESFHNVIFY 679 Query: 350 GSGKENIEFKYMNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASC 409 GSGKE I+++ +T P +G++ + R Y ETES +++ ++ PC+SC Sbjct: 680 GSGKEKIKYQSALGLKET---LKPVKGLIPEISRLYYETESEITKKKYGSYMKTAPCSSC 736 Query: 410 EGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNL--KLAGQRAKIAEKILKEIGDRL 467 +GTRL EAR V + + ++ + I A+++ ++ L +I E+++ E+ +RL Sbjct: 737 KGTRLCVEARSVRLGGKTISEVNALPINEALDWIKSVYENLDDTLMEIGEELIIEVYNRL 796 Query: 468 KFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERL 527 FL++VGL+YLT++R+A TLSGGE QR+RLASQ+ +G+VGV+YVLDEPS+GLH +D + L Sbjct: 797 SFLIDVGLHYLTINRTAPTLSGGEGQRVRLASQLSSGMVGVLYVLDEPSVGLHPKDIQSL 856 Query: 528 LGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESL 587 L TL+ LRD GN+VIVV+H+E+ +R AD +IDIGP AGV GGEV+++G +M SL Sbjct: 857 LKTLLKLRDQGNSVIVVDHEEEIMRNADWLIDIGPKAGVLGGEVMSQGDPGHVMNDSNSL 916 Query: 588 TGQYMSGKRKIEVPKKRVPAN-PEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGK 646 TG+Y+SG+ + P + P L L GA NNL +VT P+G FTC+TG+SGSGK Sbjct: 917 TGKYLSGELTVHAPSWHLKREAPTDWLTLKGASQNNLNNVTANFPLGRFTCVTGLSGSGK 976 Query: 647 STLINDTLFPIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTG 706 S+LI +TL P+ ++ LN + + +P Y +I G+E + VI++ Q+PIGRTPRSNPATYT Sbjct: 977 SSLIGETLEPLLEKILNNSDV-KPGVYEEIIGVEKLENVINVSQAPIGRTPRSNPATYTN 1035 Query: 707 VFTPVRELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQC 766 +F +R +F+ ++ + FSFN GRCE CQG G +KVEMHFL D+++ C++C Sbjct: 1036 LFNKIRRVFSNTKDAMDNWLSYDHFSFNSAKGRCENCQGQGQVKVEMHFLADVWITCNEC 1095 Query: 767 KGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQS 826 KGKR+ E L +K KGK I +VL+M + EA E+F + R LQT DVGL YI+LGQS Sbjct: 1096 KGKRFKPEVLAVKRKGKNISDVLNMDVNEAIEYFKEHKDIVRILQTFCDVGLDYIKLGQS 1155 Query: 827 ATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIV 886 ATTLSGGEAQRVKLARELSK+ G+ +YILDEPTTGLHF DIQ LL++LH+L D+G+T++ Sbjct: 1156 ATTLSGGEAQRVKLARELSKKTKGKMIYILDEPTTGLHFNDIQYLLNILHRLVDEGHTVI 1215 Query: 887 VIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLKPML 940 VIEH+LDVIKTADWI++LGPEGG GG+I+ +PE + + S+T + L+ ++ Sbjct: 1216 VIEHDLDVIKTADWIIELGPEGGKAGGDIIAQCSPEELIAVKESYTGQALRRLM 1269 Score = 192 bits (489), Expect = 4e-47, Method: Composition-based stats. Identities = 75/196 (38%), Positives = 113/196 (57%), Gaps = 15/196 (7%) Query: 406 CASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGD 465 C C+G R + E V + + + +M + A+E+F K+I Sbjct: 1092 CNECKGKRFKPEVLAVKRKGKNISDVLNMDVNEAIEYFKE--------------HKDIVR 1137 Query: 466 RLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVG-VMYVLDEPSIGLHQRDN 524 L+ +VGL+Y+ L +SA TLSGGEAQR++LA ++ G ++Y+LDEP+ GLH D Sbjct: 1138 ILQTFCDVGLDYIKLGQSATTLSGGEAQRVKLARELSKKTKGKMIYILDEPTTGLHFNDI 1197 Query: 525 ERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVP 584 + LL L L D G+TVIV+EHD D I+ AD +I++GP G GG+++A+ E ++AV Sbjct: 1198 QYLLNILHRLVDEGHTVIVIEHDLDVIKTADWIIELGPEGGKAGGDIIAQCSPEELIAVK 1257 Query: 585 ESLTGQYMSGKRKIEV 600 ES TGQ + K+ V Sbjct: 1258 ESYTGQALRRLMKLNV 1273 >UniRef50_C1F8N8 Excinuclease ABC, A subunit n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F8N8_ACIC5 Length = 994 Score = 1119 bits (2895), Expect = 0.0, Method: Composition-based stats. Identities = 459/995 (46%), Positives = 605/995 (60%), Gaps = 76/995 (7%) Query: 2 DKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYA 61 D+I +RGARTHNLKNI+ IP +L VVTG+SGSGKSSLAFDT+YAEGQRRYVESLSAYA Sbjct: 3 DQIVIRGARTHNLKNIDCTIPHGQLTVVTGVSGSGKSSLAFDTVYAEGQRRYVESLSAYA 62 Query: 62 RQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCP 121 RQFL MEKPDVD I+GL+PA++I+QK+T+ NPRSTV T TEI+DYLRLL+AR G C Sbjct: 63 RQFLERMEKPDVDFIDGLAPAVAIKQKNTTRNPRSTVATATEIYDYLRLLYARCGTVHCI 122 Query: 122 DHDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKG--------------------- 160 D + +V ++ VL+ EG RL L P+ ++ Sbjct: 123 VCDGIVKRDSVDEIAAAVLALGEGTRLYALFPVTPAQQAPEAGPESPAAEEAKPPKRPRK 182 Query: 161 ----------------EHTKTLENLASQGYIRARIDGEVCDLSDPPKL-ELQKKHTIEVV 203 + L L +G+ R G + + S P L E+ + V+ Sbjct: 183 TAKKAAAAPAASTLTESLKERLAELRKRGFNRLYQGGNIYEFSTPESLLEIDFTLPVFVL 242 Query: 204 VDRFKVRDDLTQRLAESFETALELSGGTA---VVADMDDPKAEELLFSANFACPICGYSM 260 +DR V + R+ ++ E +G V + + P+ E L FS F C C Sbjct: 243 IDRLVVSPENRARIVDAAEIGYREAGEILYEIVPREGEKPERERLRFSGAFECKTCHRVY 302 Query: 261 RELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPELSLAGGAIRGWDRRNFY-YFQ 319 RE EPRLFSFNNP GACP C G G FD +I + +L GAI W+R + ++ Sbjct: 303 REPEPRLFSFNNPFGACPRCQGFGNTIDFDLALIIPDSAKTLTAGAIDPWNRPKYRPWYA 362 Query: 320 MLKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKENIEFKYMNDRGDTSIRRHPFEGVLH 379 ++ A ++ PW LS +L G G F GV Sbjct: 363 DMRRAAQAQGVPLDVPWRELSEEHQSFILNGQGS--------------------FAGVRG 402 Query: 380 NMERRYKETESSAVREELAKFISNRPCASCEGTRLRREARHVYVENTPLPAISDMSIGHA 439 E+ ++ VR L+K+ C C+G RLR EAR V + + S ++I +A Sbjct: 403 FFEQMERKKYKLHVRVMLSKYRGYAVCPECKGQRLRAEARAVRISGKNICEASALTIRNA 462 Query: 440 MEFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLAS 499 EFF L L + +IA IL E+ RL FL VGL+YLTL R A TLSGGEAQRI+LA+ Sbjct: 463 NEFFGALTLTAMQQEIAGSILDEVRQRLHFLDAVGLDYLTLDRLASTLSGGEAQRIQLAT 522 Query: 500 QIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVID 559 +G+ LVG +YVLDEPSIGLH RD +L+ L +LRDLGNT++VVEHD D IRAAD++ID Sbjct: 523 SLGSRLVGALYVLDEPSIGLHTRDTAKLIRILENLRDLGNTILVVEHDPDVIRAADYLID 582 Query: 560 IGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEVPKKRV---PANPEKVLKLT 616 +GPGAG GG+++A G ++ + A SLTG+Y+SG I VP+ R N + L+L Sbjct: 583 LGPGAGEFGGKLLAAGTVQQVEANTSSLTGKYLSGTVTIPVPRFRREIDVDNKRQWLRLE 642 Query: 617 GARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAEPAP-YRD 675 GAR NNLK + + +P+ + TCITGVSGSGKSTL+++ L+ + L +P+ YR Sbjct: 643 GARANNLKGIDVQIPLQVLTCITGVSGSGKSTLVHEVLYKVLAYHLGKTETGDPSHLYRA 702 Query: 676 IQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESRARGYTPGRFSFNV 735 + G E + ++ +DQ+PIGRTPRSNP TY F +RELFA PE++ RGY+ G FSFNV Sbjct: 703 VHGAERLNDIVLVDQTPIGRTPRSNPVTYIKAFDAIRELFASQPEAQRRGYSAGYFSFNV 762 Query: 736 RGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEE 795 GGRC+ C+GDG + VEM FL D+ +PC++C G RY LEIKYKGK+IH+VL MT++E Sbjct: 763 PGGRCDVCEGDGTVTVEMQFLADVELPCEECSGSRYKASVLEIKYKGKSIHDVLGMTVKE 822 Query: 796 AREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLAREL----------S 845 A FF P + KL L ++GL Y+RLGQSATTLSGGEAQRVKLA L + Sbjct: 823 ALRFFAGHPKIVDKLAVLEEIGLGYLRLGQSATTLSGGEAQRVKLALHLASVRSSGSSEA 882 Query: 846 KRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADWIVDLG 905 ++ + LYILDEPTTGLHF D+ +LL KL D G ++VVIEHNLD+IK+ADWI+DLG Sbjct: 883 RKAANRILYILDEPTTGLHFEDVSKLLMAFKKLIDGGASLVVIEHNLDIIKSADWIIDLG 942 Query: 906 PEGGSGGGEILVSGTPETVAECEASHTARFLKPML 940 PEGG+GGG+I+ +GTPE + E SHT +L +L Sbjct: 943 PEGGTGGGQIVATGTPEEITRHELSHTGYWLARVL 977 >UniRef50_Q6SI25 Excinuclease ABC, A subunit n=1 Tax=uncultured marine bacterium 105 RepID=Q6SI25_9BACT Length = 985 Score = 1115 bits (2885), Expect = 0.0, Method: Composition-based stats. Identities = 445/981 (45%), Positives = 600/981 (61%), Gaps = 64/981 (6%) Query: 3 KIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYAR 62 +I ++GARTHNLK I+L + +++L+V+TG+SGSGKSSLAFDTLYAEGQRRYVESLSAYAR Sbjct: 11 QIIIQGARTHNLKGIDLTLSKNQLVVITGVSGSGKSSLAFDTLYAEGQRRYVESLSAYAR 70 Query: 63 QFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCPD 122 QFL MEKPDVD I+G+SPAI+I QK++ NPRSTVGT TEI+DYLRLLFAR G+ C Sbjct: 71 QFLERMEKPDVDRIDGISPAIAIRQKNSIRNPRSTVGTTTEINDYLRLLFARAGQTICRQ 130 Query: 123 HDVPLAAQTVSQMVDNVLSQPEGKRLMLLA--PII-----KERKGEH------------- 162 P+ +T + + + L + P++ ++K E Sbjct: 131 CGRPVTRETAEVVAKKLTQLTDVTHLFVGFVMPLVTGAAEVDKKEELPALVEEETTEDGV 190 Query: 163 --------------------TKTLENLASQGYIRARIDGEVCDLSDPPKLELQKKHTIEV 202 T+E L +G+ R +DG D +EV Sbjct: 191 SKVGGSGNGTLESLQAVDLIQATIETLRRKGFGRLYVDGRAVAFKDVNVAAQVNGSILEV 250 Query: 203 VVDRFKVRDDLTQRLAESFETALELSGGTAVVADMDDPKA--EELLFSANFACPICGYSM 260 VVDR KV ++ RL +S E A GGTA V ++D + FS +F C C Sbjct: 251 VVDRIKVAPEMLTRLTDSIEIAYHEGGGTAFVIEVDQAGSGTTRHEFSEHFECRTCDLGY 310 Query: 261 RELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPELSLAGGAIRGWDRRNFYYF-Q 319 +PRLFSFNNP GACPTC G G D + V+ +P S+ AI W + ++ Sbjct: 311 EVPQPRLFSFNNPFGACPTCHGFGNIIELDMNLVVPDPSRSVQQDAIEPWSKPHYRKKLA 370 Query: 320 MLKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKENIEFKYMNDRGDTSIRRHPFEGVLH 379 LK A K ++ PW +S + ++ G G+ ++G+ Sbjct: 371 DLKRAARVQKISLDVPWEEMSDQDRQFIIEGDGQ-------------------GYDGIRG 411 Query: 380 NMERRYKETESSAVREELAKFISNRPCASCEGTRLRREARHVYVENTPLPAISDMSIGHA 439 R ++ +R L+++ C C GTRLR EAR V V+ + I +++ Sbjct: 412 FFRRLERKKYKVHIRVFLSRYRGYLKCPDCAGTRLRPEARDVQVDGRTIDQICALTVSEG 471 Query: 440 MEFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLAS 499 FF+NL L + I E++L EI RL FL +VGL+YLTL R + TLSGGEAQRI LA+ Sbjct: 472 AVFFSNLALDDRENAIVERVLNEIQKRLTFLGDVGLDYLTLDRLSSTLSGGEAQRINLAT 531 Query: 500 QIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVID 559 +G+ LVG +YVLDEPSIGLH RDN+RL+ L LRD GNTV+VVEHD D IR ADHV+D Sbjct: 532 SLGSALVGTLYVLDEPSIGLHPRDNQRLIAILQRLRDQGNTVVVVEHDADMIRVADHVVD 591 Query: 560 IGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEVPKKRVPANPEKVLKLTGAR 619 +G GAG HGG VV GP E ++ SLT +Y+ + I +P+KR +K L++ GA Sbjct: 592 LGLGAGDHGGSVVFTGPFEELLVQKRSLTAKYLRDELAIPIPQKRRKLREQK-LRVFGAS 650 Query: 620 GNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAEPAPYRDIQGL 679 +NL+D+ + +P+ + TC+TGVSGSGKSTL++D L+ +R + G+ +R I+G Sbjct: 651 EHNLQDIDVEIPLNMLTCVTGVSGSGKSTLVHDVLYAGLKR-IKGSWDKPIGAHRAIEGA 709 Query: 680 EHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESRARGYTPGRFSFNVRGGR 739 E D V IDQ+PIGRTPRSNP TY F P+R L A +++A TP FSFNV GGR Sbjct: 710 ELLDDVALIDQAPIGRTPRSNPVTYLKAFDPIRALLASTKDAKALALTPSHFSFNVPGGR 769 Query: 740 CEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREF 799 C+ C+G GV++VEM FL D++VPCDQC G RY + LE+KY+G+ + ++L+MT+ E F Sbjct: 770 CDTCEGQGVVRVEMQFLADVFVPCDQCNGARYKPQVLEVKYRGRNVDQILNMTVREGLLF 829 Query: 800 FDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEP 859 F+ + R+LQ L ++GL Y+RLGQ ATTLSGGEAQR+K+A LS G+ +TLYILDEP Sbjct: 830 FNTSQKVLRRLQVLDEIGLGYLRLGQLATTLSGGEAQRIKIASRLSAHGSDRTLYILDEP 889 Query: 860 TTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSG 919 TTGLHF DI +LL KL G+T++VIEHNLDVIK ADWI+DLGPEGG GG+++ +G Sbjct: 890 TTGLHFDDIAKLLTAFRKLLQAGHTLLVIEHNLDVIKMADWIIDLGPEGGLAGGQVVAAG 949 Query: 920 TPETVAECEASHTARFLKPML 940 PE +A+ E SHT R+L+ +L Sbjct: 950 PPEALAKVEHSHTGRYLREVL 970 Score = 90.4 bits (223), Expect = 3e-16, Method: Composition-based stats. Identities = 41/125 (32%), Positives = 58/125 (46%), Gaps = 6/125 (4%) Query: 606 PANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGA 665 + + + GAR +NLK + LTL ITGVSGSGKS+L DTL+ QR+ + Sbjct: 5 ASETNGQIIIQGARTHNLKGIDLTLSKNQLVVITGVSGSGKSSLAFDTLYAEGQRRYVES 64 Query: 666 TIAEPAPYRDIQGLEHFDKV------IDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVP 719 A + + D++ I I Q R PRS T T + +R LFA Sbjct: 65 LSAYARQFLERMEKPDVDRIDGISPAIAIRQKNSIRNPRSTVGTTTEINDYLRLLFARAG 124 Query: 720 ESRAR 724 ++ R Sbjct: 125 QTICR 129 >UniRef50_Q2NJE0 Excinuclease ABC subunit A n=3 Tax=Candidatus Phytoplasma RepID=Q2NJE0_AYWBP Length = 972 Score = 1114 bits (2881), Expect = 0.0, Method: Composition-based stats. Identities = 461/962 (47%), Positives = 633/962 (65%), Gaps = 27/962 (2%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 63 I+VRGAR +NLKNIN+ IP++KL+++TGLSGSGKSSLAFDTLY EG+RRYVESLSAYARQ Sbjct: 9 IKVRGARQNNLKNINIDIPKNKLVIITGLSGSGKSSLAFDTLYQEGKRRYVESLSAYARQ 68 Query: 64 FLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCPDH 123 FL EKP+VD IEGLSP+IS++QK+TS+NPRSTVGTITEI+DYLRL++A + P P+ Sbjct: 69 FLGSFEKPNVDSIEGLSPSISVDQKTTSNNPRSTVGTITEIYDYLRLIYANIAFPFHPEK 128 Query: 124 DVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARIDGEV 183 ++ L QT+ QM++ + +++LAPII+ +KG H KTLE LA G+ R I+ + Sbjct: 129 NIVLEKQTIEQMINKTNQTFPKQLVLILAPIIERKKGTHQKTLEALAKDGFNRVIINDII 188 Query: 184 CDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVADMDDP--- 240 + D P L + H I VV+DRF+V D RL E+ E AL L+ G + D Sbjct: 189 YLMDDIPSLTKNQYHNIYVVIDRFEVNSDNQTRLFEALEQALNLAQGKVFIMDYKSKNSN 248 Query: 241 ----------KAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFD 290 K + L + N+ + + E RLFSFN P GAC C G+G D Sbjct: 249 DSNKDDNKNKKCQILKLNCNYHLEGINFDIPLRESRLFSFNTPLGACQICKGIGKTAEID 308 Query: 291 PDRVIQNPELSLAGGAIRGWDRRNFYYF-----QMLKSLADHYKFDVEAPWGSLSANVHK 345 D ++ + E L AI + N Y Q LK++ +HY+ D+ P + Sbjct: 309 CDMIL-DYEKPLNKDAILIFKSNNEYNNFASKEQELKAVCNHYQIDMTVPLKKIDPQKLN 367 Query: 346 VVLYGSGK-----ENIEF-KYMNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAK 399 ++LYGS + F ++ + +++ FEG+ ++RR++ET S +++ L+ Sbjct: 368 IILYGSPDQIPLTPPLCFSRFSKNTTTKTLKCDFFEGIASMLKRRFEETTSEWLKKWLSN 427 Query: 400 FISNRPCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKI 459 ++ + C C+G RL + A + N + I+D+SI + FF NL+L+ + KI Sbjct: 428 YMMEKKCKKCQGQRLNQGALLFKINNKNIYEITDLSIEQTLAFFQNLELSKKDTKIINLA 487 Query: 460 LKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGL 519 LKE+ +RL FL +GL YL+LSRS TLSGGE+QRIRLA+QIG+ L GV+YVLDEPSIGL Sbjct: 488 LKEVINRLTFLKEIGLGYLSLSRSVTTLSGGESQRIRLATQIGSQLSGVLYVLDEPSIGL 547 Query: 520 HQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEA 579 HQ+DN+ L+ +L +RDLGN++IVVEHD D + A+D++IDIGP AG+ GG+V A G + Sbjct: 548 HQKDNDLLIKSLKKMRDLGNSLIVVEHDHDTMLASDYLIDIGPQAGIFGGKVQAFGTPQE 607 Query: 580 IMAVPESLTGQYMSGKRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCIT 639 +M SLTG+Y+S K +I+VPK R N + +L +T A NNLK + + P+ +T Sbjct: 608 VMKNKNSLTGKYLSKKIQIKVPKIRRKGNKDHIL-VTKASKNNLKSINVCFPMQQLIVVT 666 Query: 640 GVSGSGKSTLINDTLFPIAQRQLNGATIAEPAPYRDI-QGLEHFDKVIDIDQSPIGRTPR 698 GVSGSGKSTL+ND L Q++ + + + + K+++I Q PIG+TPR Sbjct: 667 GVSGSGKSTLVNDVLLDCLQKKYSKKNKNQQKDFSHLVNDFNKVKKIVEISQDPIGKTPR 726 Query: 699 SNPATYTGVFTPVRELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPD 758 SNP TYTGVF +REL++ E++ +GY GRFSFNV+GGRCE C GDGV K+ MHFLPD Sbjct: 727 SNPLTYTGVFDEIRELYSKTKEAQMKGYQKGRFSFNVKGGRCEVCSGDGVKKISMHFLPD 786 Query: 759 IYVPCDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGL 818 +YV C+ CKG RY +ETL IKYK K I ++L M++EE FF P + +L+ L +VGL Sbjct: 787 VYVMCEACKGTRYQKETLSIKYKDKNIADILAMSVEEGVLFFQNHPKIKHQLEILQNVGL 846 Query: 819 TYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKL 878 YI+LGQS+ TLSGGEAQRVKLA EL K+ LYILDEPTTGLH D++QLL VLH++ Sbjct: 847 GYIKLGQSSPTLSGGEAQRVKLASELHKKVIPGALYILDEPTTGLHSEDVRQLLKVLHQM 906 Query: 879 RDQGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLKP 938 D+ TIVVIEHNLDVIK AD+I+DLGPEGG+ GG ++ +GTPE V++ E S+T ++LK Sbjct: 907 TDKKATIVVIEHNLDVIKNADYIIDLGPEGGACGGYVVATGTPEQVSQNEKSYTGKYLKK 966 Query: 939 ML 940 +L Sbjct: 967 IL 968 Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats. Identities = 36/119 (30%), Positives = 60/119 (50%), Gaps = 6/119 (5%) Query: 606 PANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGA 665 N + +K+ GAR NNLK++ + +P ITG+SGSGKS+L DTL+ +R+ + Sbjct: 2 KNNKNQFIKVRGARQNNLKNINIDIPKNKLVIITGLSGSGKSSLAFDTLYQEGKRRYVES 61 Query: 666 TIAEPAPYR------DIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGV 718 A + ++ +E I +DQ PRS T T ++ +R ++A + Sbjct: 62 LSAYARQFLGSFEKPNVDSIEGLSPSISVDQKTTSNNPRSTVGTITEIYDYLRLIYANI 120 Score = 98.5 bits (244), Expect = 1e-18, Method: Composition-based stats. Identities = 42/125 (33%), Positives = 61/125 (48%), Gaps = 7/125 (5%) Query: 2 DKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYA 61 D I V A +NLK+IN+ P +LIVVTG+SGSGKS+L D L Q++Y + Sbjct: 638 DHILVTKASKNNLKSINVCFPMQQLIVVTGVSGSGKSTLVNDVLLDCLQKKYSKKNKNQQ 697 Query: 62 RQFLSLMEK-PDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRC 120 + F L+ V I + I Q PRS T T + D +R L+++ E + Sbjct: 698 KDFSHLVNDFNKVKKI------VEISQDPIGKTPRSNPLTYTGVFDEIRELYSKTKEAQM 751 Query: 121 PDHDV 125 + Sbjct: 752 KGYQK 756 >UniRef50_Q01SK3 Excinuclease ABC subunit A n=20 Tax=Bacteria RepID=Q01SK3_SOLUE Length = 929 Score = 1105 bits (2859), Expect = 0.0, Method: Composition-based stats. Identities = 451/958 (47%), Positives = 585/958 (61%), Gaps = 50/958 (5%) Query: 2 DKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYA 61 D I +RGAR HNLKNI+L IP ++L VVTG+SGSGKSSLAFDT+YAEGQRRYVESLSAYA Sbjct: 3 DYIAIRGARVHNLKNISLCIPHNQLTVVTGVSGSGKSSLAFDTIYAEGQRRYVESLSAYA 62 Query: 62 RQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCP 121 RQFL MEKPDVD I+G++PA++I QK+T+ NPRSTV T TE D+LRLL+ARVG+ CP Sbjct: 63 RQFLERMEKPDVDDIDGIAPAVAIRQKNTTRNPRSTVATSTECFDFLRLLYARVGQTFCP 122 Query: 122 DHDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPI-IKERKGEHTKTLENLASQGYIRARID 180 + TV Q+ VL P+G R L P L L +G+ R Sbjct: 123 TCGTRVIKDTVDQVAARVLQYPQGSRWYALFPCGEHASTDALRDHLFELRKKGFNRLFQA 182 Query: 181 GEVCDLSDPPK-LELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVADMDD 239 G + + S P L++ + ++VDR + DL QRL +S E +G V + Sbjct: 183 GRLFEFSTPESLLDIDFTKPLFILVDRIAISPDLHQRLVDSIEICYREAG---EVIFENA 239 Query: 240 PKAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPE 299 E+L F+ F C C EP LFSFN+P GACP C G G FD +RVI +P Sbjct: 240 STGEQLRFNERFQCKTCLMEFNPPEPILFSFNSPFGACPRCQGFGNTIDFDMNRVIPDPG 299 Query: 300 LSLAGGAIRGWDRRNFYYFQMLKSLADHY-KFDVEAPWGSLSANVHKVVLYGSGKENIEF 358 L+L GA+ W + + + L + H K P L+A + Sbjct: 300 LTLDEGAVDPWTKPKYRSW--LGNFKKHRAKVRTNVPVCDLTAAERDTL----------- 346 Query: 359 KYMNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGTRLRREA 418 E + + + VR L+++ C C G RLR+EA Sbjct: 347 ---------------DEFIRRFFDHLETKKYKVHVRVFLSRYRGYALCPDCRGARLRKEA 391 Query: 419 RHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNVGLNYL 478 +V V L I M+I A EFF +L L+ + IAEKIL EI RLKFL +VGL YL Sbjct: 392 LYVRVAGRNLADIVRMNIAEAQEFFLSLSLSPEETAIAEKILVEIRQRLKFLNDVGLEYL 451 Query: 479 TLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLG 538 TL R A TLSGGEAQRI+LA+ +G+ LVG YVLDEPSIGLH RD RL+ L LR LG Sbjct: 452 TLDRLASTLSGGEAQRIQLATSLGSRLVGACYVLDEPSIGLHSRDTGRLIRILEELRGLG 511 Query: 539 NTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKI 598 NT++VVEHD + +R+ADH++D+GPGAG HGGE+V EG L ++ +SLT +Y+ G+ K+ Sbjct: 512 NTIVVVEHDPNVMRSADHIVDLGPGAGEHGGEIVFEGNLPTLIQSGDSLTAKYLRGELKV 571 Query: 599 EVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIA 658 P+ R +P + ++ GAR +NLK+V + +P+G+ +TGVSGSGKSTL++D ++ Sbjct: 572 SAPRVRRTVDPRRTMRFNGARVHNLKNVDVEIPLGMMVVVTGVSGSGKSTLVHDVIYRSL 631 Query: 659 Q--------RQLNGATIAE-----PAP---YRDIQGLEHFDKVIDIDQSPIGRTPRSNPA 702 + R GAT P P R ++G E + IDQSPIGRTPRSNP Sbjct: 632 EALHKARDARDDGGATAEPELGDAPGPQLMCRKVEGAERISTTVMIDQSPIGRTPRSNPV 691 Query: 703 TYTGVFTPVRELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVP 762 TY F +R LFA ++ RGYT G FSFN+ GGRCE CQGDG + VEM FL D+ + Sbjct: 692 TYIKAFELIRALFASTRDAEKRGYTAGHFSFNIPGGRCETCQGDGTVTVEMQFLADVELM 751 Query: 763 CDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIR 822 C++CKG RY LEIKY G+ IHEVL +T+ EA +FF A P L ++L+ L DVGL Y+R Sbjct: 752 CEECKGTRYKSGILEIKYNGRNIHEVLQLTVREAMDFFHAAPKLVQRLKVLDDVGLGYLR 811 Query: 823 LGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQG 882 LGQSATTLSGGEAQRVKLA LS TL+I DEPTTGLHF DI +LL +L + G Sbjct: 812 LGQSATTLSGGEAQRVKLAAHLSTASNAGTLFICDEPTTGLHFDDIAKLLAAFQRLIENG 871 Query: 883 NTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLKPML 940 ++V+IEHNLDVIK ADW++DLGPEGGS GG+I+ +G PE +A + S+T +L+ +L Sbjct: 872 GSLVIIEHNLDVIKAADWVIDLGPEGGSRGGQIVATGPPEVIAVAKDSYTGHYLREVL 929 Score = 96.9 bits (240), Expect = 3e-18, Method: Composition-based stats. Identities = 46/147 (31%), Positives = 69/147 (46%), Gaps = 24/147 (16%) Query: 610 EKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAE 669 + + + GAR +NLK+++L +P T +TGVSGSGKS+L DT++ QR+ + A Sbjct: 2 QDYIAIRGARVHNLKNISLCIPHNQLTVVTGVSGSGKSSLAFDTIYAEGQRRYVESLSAY 61 Query: 670 PAPYR------DIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESRA 723 + D+ ++ + I Q R PRS AT T F +R L+A V ++ Sbjct: 62 ARQFLERMEKPDVDDIDGIAPAVAIRQKNTTRNPRSTVATSTECFDFLRLLYARVGQT-- 119 Query: 724 RGYTPGRFSFNVRGGRCEACQGDGVIK 750 F C C G VIK Sbjct: 120 -------F--------CPTC-GTRVIK 130 >UniRef50_Q2S5D7 Excinuclease ABC, A subunit n=3 Tax=Bacteria RepID=Q2S5D7_SALRD Length = 981 Score = 1092 bits (2824), Expect = 0.0, Method: Composition-based stats. Identities = 430/975 (44%), Positives = 594/975 (60%), Gaps = 56/975 (5%) Query: 2 DKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYA 61 D I +RGAR HNLK+I+L +PR++LIV TG SGSGKSSL FDT+YAEGQRRYVESLSAYA Sbjct: 27 DHIVIRGARQHNLKDIDLDLPRNELIVFTGPSGSGKSSLCFDTIYAEGQRRYVESLSAYA 86 Query: 62 RQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCP 121 RQFL M+KP+ D I GL+PAI+IEQK++ NPRSTV T TEI+D+LRLLFAR+G P Sbjct: 87 RQFLERMDKPEADLITGLAPAIAIEQKTSGKNPRSTVATQTEIYDHLRLLFARIGTTYSP 146 Query: 122 DHDVPLAAQTVSQMVDNVLSQPE-GKRLMLLAPIIKERKGEHTKTLENLASQGYIRAR-- 178 P++ T + D + + G R L API + L +L +G+ R Sbjct: 147 VSGEPVSRDTPHDVADRLDDALDDGTRFYLCAPIPEHADMALRDQLTSLRERGFYRILRL 206 Query: 179 ---------IDGEVCDLSD--PPKLELQKKHTIEVVVDRFKVR---DDLTQRLAESFETA 224 + E+ DL+ P + + + V++DR KV+ D R+AES E A Sbjct: 207 PTERQAEQGQEPEILDLNQEAPSSVNHYGRARLRVLIDRLKVKTGDADTRSRIAESVEQA 266 Query: 225 LELSGGTAVV-------------ADMDDPKAEELLFSANFACPICGYSMRELEPRLFSFN 271 + G V D + LF + G E P+LFSFN Sbjct: 267 FDEGDGYCTVIPAPRGGYDETAHPDASQHQGPIPLFEFSAHFERDGMRFEEPTPQLFSFN 326 Query: 272 NPAGACPTCDGLGVQQYFDPDRVIQNPELSLAGGAIRGWDRRNF-YYFQMLKSLADHYKF 330 +P GACPTC G G D D ++ N +LS+ GA+ + + +F+ L ++A Sbjct: 327 SPVGACPTCQGFGRVPGLDEDLIVPNKQLSIRDGALAPFRGDKWGKHFKDLIAVAADVGL 386 Query: 331 DVEAPWGSLSANVHKVVLYGSGKENIEFKYMNDRGDTSIRRHPFEGVLHNMERRYKETES 390 D++ P+ L+ ++V G + G+ E + + Sbjct: 387 DIDCPYHELADWEEEIVWEGKDD--------------------YIGLHGFFEFLEENSYK 426 Query: 391 SAVREELAKFISNRPCASCEGTRLRREARHVYVEN-----TPLPAISDMSIGHAMEFFNN 445 R A+F C C G RL +A +V V + I M+ A ++F Sbjct: 427 RHYRIFRARFRGYSECPDCSGHRLCDDALYVKVGGDAVEQKHIGEICAMTTRAARDYFEA 486 Query: 446 LKLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGL 505 L L ++A ++++E+ +R ++LV+VGL+YLTL R A+TLSGGE QRI L++ +G+ L Sbjct: 487 LALTDYEQEVAGRVMEELRERSRYLVDVGLDYLTLDRLAQTLSGGETQRINLSTSLGSSL 546 Query: 506 VGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAG 565 VG +YVLDEP++GLH RDNERL+ L LRDLGNTV+VVEHD + AAD ++D+GP +G Sbjct: 547 VGSLYVLDEPTVGLHPRDNERLIDILQRLRDLGNTVLVVEHDPVTMEAADQLVDLGPASG 606 Query: 566 VHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEVPKKRVPANPEKVLKLTGARGNNLKD 625 GGEVV +GP + I+ +SLTGQY+SG++++ VP +R PA+P+ L + AR +NLK Sbjct: 607 AFGGEVVFQGPYDEILEAEDSLTGQYLSGRKEVPVPDERRPADPDDTLVIENARQHNLKH 666 Query: 626 VTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAEPAPYRDIQGLEHFDKV 685 V + +P+G C+TGVSGSGKSTL N TLF R G+ + + I+G E+ D V Sbjct: 667 VDVEIPLGQIVCVTGVSGSGKSTLTNQTLFEGLHRLKGGSGDGKVGAHDTIRGHENVDAV 726 Query: 686 IDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESRARGYTPGRFSFNVRGGRCEACQG 745 +DQS IGR+PRSNPATYT F +R+LFA +S+ GY G FSFN +GGRCE C+G Sbjct: 727 EMVDQSSIGRSPRSNPATYTNAFDGIRKLFAQARQSQVHGYDRGTFSFNTKGGRCEECEG 786 Query: 746 DGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAVPA 805 GV+KVEM FL D+Y+ C+ C G+RY +E L + Y GK I +VLDMT++EA +FF+ A Sbjct: 787 QGVVKVEMQFLADLYLECEACNGQRYKKEVLNVTYNGKNIADVLDMTVDEAADFFEGERA 846 Query: 806 LARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHF 865 + KL+ L D+GL Y+ LGQ +TTLSGGEAQR+KLA LS R + +TLYI DEPTTGLHF Sbjct: 847 IINKLEVLQDIGLGYLTLGQPSTTLSGGEAQRIKLASHLSGRASDRTLYIFDEPTTGLHF 906 Query: 866 ADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVA 925 DI++LL +L + +++++IEHNLDV+K AD ++DLGPEGG GG ++ +GTPE VA Sbjct: 907 DDIRKLLGAFEQLVENSHSVLIIEHNLDVVKYADHVIDLGPEGGDAGGNVVATGTPEEVA 966 Query: 926 ECEASHTARFLKPML 940 C+ SHT RFL+ +L Sbjct: 967 ACDESHTGRFLRDVL 981 Score = 97.3 bits (241), Expect = 2e-18, Method: Composition-based stats. Identities = 41/137 (29%), Positives = 63/137 (45%), Gaps = 6/137 (4%) Query: 588 TGQYMSGKRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKS 647 T + + I + + + + GAR +NLKD+ L LP TG SGSGKS Sbjct: 4 TERLPTQDPVIANASVTARESAQDHIVIRGARQHNLKDIDLDLPRNELIVFTGPSGSGKS 63 Query: 648 TLINDTLFPIAQRQLNGATIAEPAPYRDIQGLEHFDKV------IDIDQSPIGRTPRSNP 701 +L DT++ QR+ + A + + D + I I+Q G+ PRS Sbjct: 64 SLCFDTIYAEGQRRYVESLSAYARQFLERMDKPEADLITGLAPAIAIEQKTSGKNPRSTV 123 Query: 702 ATYTGVFTPVRELFAGV 718 AT T ++ +R LFA + Sbjct: 124 ATQTEIYDHLRLLFARI 140 >UniRef50_B3DYB1 Excinuclease ABC subunit A, ATPase n=4 Tax=Bacteria RepID=B3DYB1_METI4 Length = 947 Score = 1092 bits (2824), Expect = 0.0, Method: Composition-based stats. Identities = 443/948 (46%), Positives = 626/948 (66%), Gaps = 20/948 (2%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 63 I ++GA+ HNLKNI+L IP++ V+TG+SGSGKSSLAFDTL+AE QRRY+ESLS Y+RQ Sbjct: 6 ISIKGAKEHNLKNISLRIPKNSFTVITGVSGSGKSSLAFDTLHAEAQRRYMESLSVYSRQ 65 Query: 64 FLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCPDH 123 FL EKP +D +EG+ P+I+IEQK++ +PRSTV T+T I++YL+LLFA +GEP P Sbjct: 66 FLEQFEKPQLDALEGIIPSIAIEQKTSKGSPRSTVATLTNIYEYLKLLFAHLGEPHHPIT 125 Query: 124 DVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARIDGEV 183 L T+ +M +LS +MLLA ++K K + LE + +G++R RI G+V Sbjct: 126 GKKLKRYTIEEMATELLSLAPQSSVMLLASLVKNEKQKLNHLLEQVQKEGFLRVRIAGKV 185 Query: 184 CDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGG--TAVVADMDDPK 241 ++ +L ++ ++E+V+DR ++ D+ RL +S E AL + G AVV + D K Sbjct: 186 MEIEQALELPSEEPPSVEIVIDRIRIEPDIKSRLYDSLELALRVGKGVVRAVVQEKDSGK 245 Query: 242 AEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPELS 301 EL+ S P GY +L P+ FS+N+P GACP C GLG + FDP ++ +P + Sbjct: 246 EVELVMSNLHYDPETGYLFEDLSPKHFSYNSPWGACPHCHGLGTELDFDPALIVPDPSVP 305 Query: 302 LAGGAIRGWDRRN----FYYFQMLKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKENIE 357 L W++ + L A Y + W S KV+LYGS NI+ Sbjct: 306 LGENPFAPWEKMGRGLKELLVEELLEQASFYGESFDKSWEDCSEEFKKVILYGSSASNIK 365 Query: 358 FKYMNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGTRLRRE 417 K P+EGV+ ++ R +KE+ S+ +R L +F+ PC C+G RL + Sbjct: 366 KK-------KGSLPKPYEGVIPSLRRMFKESSSALIRSRLKEFLFAVPCEVCQGQRLNPD 418 Query: 418 ARHVYVE-----NTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDRLKFLVN 472 A V +E + ++++ A+ + +L + K A +IL + RL+ LV Sbjct: 419 ALAVTIEIEGWPPMNIAQTMNLTVTEALGWTLSLLSRHKENKGATEILSGLVSRLENLVE 478 Query: 473 VGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLI 532 +GL YL L+R A TLSGGE+QR+RLASQ+ L G++YVLDEPSIGLH RD +L+ + Sbjct: 479 LGLGYLELNRQASTLSGGESQRVRLASQLSGELTGLLYVLDEPSIGLHPRDTAKLVKLIK 538 Query: 533 HLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYM 592 L+ LGNTVIVVEHDE IR AD ++++GPGAG GG VVA G +E ++ ESLTG Y+ Sbjct: 539 KLKQLGNTVIVVEHDEYTIREADTIVELGPGAGPKGGNVVAWGSIEEVLKTKESLTGAYL 598 Query: 593 SGKRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLIND 652 G+R I VP +R +K ++L G R +NLK++ + PVGL +C+TGVSGSGKSTL+ND Sbjct: 599 RGERSIPVPSRRRKP-GKKFIRLYGVREHNLKNIDVAFPVGLLSCVTGVSGSGKSTLVND 657 Query: 653 TLFPIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVR 712 L I +L + EP + I+GL +V+ +DQSPIGR+ RSNPA++ G +R Sbjct: 658 VLAKIFLNRLQDPRV-EPGAFDKIEGLSWIKRVVIVDQSPIGRSMRSNPASFIGALAHIR 716 Query: 713 ELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYN 772 ELFA +P+S+ G++ RFSFN+ GGRCE C+G+GVI++EM FLP +Y C+ C+GKR+N Sbjct: 717 ELFAKLPKSKVLGFSASRFSFNIPGGRCERCKGEGVIELEMAFLPPVYETCEACQGKRFN 776 Query: 773 RETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSG 832 RETLE+ Y+GK I ++L+MTIEE FF +P L KLQ + +VGL Y++LGQ A+TLSG Sbjct: 777 RETLEVTYRGKNIADILEMTIEEGSVFFKNIPPLFEKLQIMEEVGLGYLKLGQPASTLSG 836 Query: 833 GEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNL 892 GEAQR+KLA EL K G TLYILDEPTTGLHFADI+ LL++LH+L D+GNT++VIEHNL Sbjct: 837 GEAQRIKLATELLKGSEGNTLYILDEPTTGLHFADIELLLNLLHRLVDKGNTVIVIEHNL 896 Query: 893 DVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLKPML 940 +V+K+AD+++DLGPEGG+GGG+I+ +GTPE VA+ +AS T ++L+ +L Sbjct: 897 EVVKSADYVIDLGPEGGTGGGKIIAAGTPEEVAKTKASWTGQYLRSLL 944 Score = 98.9 bits (245), Expect = 8e-19, Method: Composition-based stats. Identities = 41/122 (33%), Positives = 59/122 (48%), Gaps = 23/122 (18%) Query: 2 DKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYA 61 I + G R HNLKNI++ P L VTG+SGSGKS+L D L A Sbjct: 616 KFIRLYGVREHNLKNIDVAFPVGLLSCVTGVSGSGKSTLVNDVL---------------A 660 Query: 62 RQFLSLMEKPDV-----DHIEGLS---PAISIEQKSTSHNPRSTVGTITEIHDYLRLLFA 113 + FL+ ++ P V D IEGLS + ++Q + RS + ++R LFA Sbjct: 661 KIFLNRLQDPRVEPGAFDKIEGLSWIKRVVIVDQSPIGRSMRSNPASFIGALAHIRELFA 720 Query: 114 RV 115 ++ Sbjct: 721 KL 722 Score = 95.0 bits (235), Expect = 1e-17, Method: Composition-based stats. Identities = 41/119 (34%), Positives = 62/119 (52%), Gaps = 6/119 (5%) Query: 609 PEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIA 668 + + GA+ +NLK+++L +P FT ITGVSGSGKS+L DTL AQR+ + Sbjct: 2 GNGFISIKGAKEHNLKNISLRIPKNSFTVITGVSGSGKSSLAFDTLHAEAQRRYMESLSV 61 Query: 669 EPAPYRD------IQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPES 721 + + + LE I I+Q +PRS AT T ++ ++ LFA + E Sbjct: 62 YSRQFLEQFEKPQLDALEGIIPSIAIEQKTSKGSPRSTVATLTNIYEYLKLLFAHLGEP 120 >UniRef50_B3QT58 Excinuclease ABC, A subunit n=23 Tax=Bacteroidetes/Chlorobi group RepID=B3QT58_CHLT3 Length = 980 Score = 1085 bits (2806), Expect = 0.0, Method: Composition-based stats. Identities = 440/951 (46%), Positives = 609/951 (64%), Gaps = 37/951 (3%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 63 + ++GARTHNLKNI++ IPR+KL+V++G+SGSGKSSLAFDTLYAEG RRYVES+S+Y RQ Sbjct: 52 VFIKGARTHNLKNIDVAIPRNKLVVISGVSGSGKSSLAFDTLYAEGHRRYVESMSSYIRQ 111 Query: 64 FLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCPDH 123 FL + KPDVD I+G++PAI+IEQK+TS NPRSTVGT+TEI+DYLRLLFAR+G+ D Sbjct: 112 FLERIPKPDVDFIQGIAPAIAIEQKTTSKNPRSTVGTVTEIYDYLRLLFARIGKTYSKDT 171 Query: 124 DVPLAAQTVSQMVDNVLSQPEGKRLMLLAP-----IIKERKGEHTKTLENLASQGYIRAR 178 + + T ++ V E + + P + K+++ + L+NL +G+ R Sbjct: 172 NELVLKHTPEDVLFQVKLFEERTKFYIGFPFPHHKLAKKKERSFSDELQNLKQKGFTRIV 231 Query: 179 IDGEVCDLSDPP------KLELQKKHTIEVVVDRFKVRDDLT--QRLAESFETALELSGG 230 + DLS KL ++ + V+ DR R+D R+ E+ ET SGG Sbjct: 232 KGETIFDLSSEQDENKLTKLNKSEQSELLVLTDRLAYREDEELFHRVTEAVETCFRESGG 291 Query: 231 TAVVADMDDPKAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFD 290 A V + + FS + G E P+LF+FN+P GACPTC G G D Sbjct: 292 YATVRVL---GGRDYQFSDKLE--LNGIEYEEPTPQLFAFNSPVGACPTCQGFGRIPGVD 346 Query: 291 PDRVIQNPELSLAGGAIRGWDR-RNFYYFQMLKSLADHYKFDVEAPWGSLSANVHKVVLY 349 D V+ N LS+ GAI W+ ++ + + L +A +K ++ P+GSLS N K++ Sbjct: 347 EDAVVPNKALSIRDGAIACWNSDKHSRHLRDLIRVASEHKIPLDEPYGSLSENAKKIIWQ 406 Query: 350 GSGKENIEFKYMNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASC 409 G+ + +G +ER + R L+++ C C Sbjct: 407 GA---------------KNSDFLGVKGFFKEIEREAQ--YKMHYRVLLSRYRGYTVCPDC 449 Query: 410 EGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDRLKF 469 +GTRLR++A V V L I +M+IG A +FF N++++ +A IL+EI RL + Sbjct: 450 QGTRLRKDALQVRVAKMTLADIVEMTIGEAYQFFKNIEISRFDKAVASTILEEILRRLSY 509 Query: 470 LVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLG 529 LV VGL+YLTLSR ++TLSGGE+QRI LA+ +G+ LVG +Y+LDEPSIGLHQRD+ RL+ Sbjct: 510 LVEVGLDYLTLSRPSQTLSGGESQRINLATSLGSSLVGSLYILDEPSIGLHQRDSARLIR 569 Query: 530 TLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTG 589 L LRD+GNTVIVVEHD + I AAD ++D+GP AG HGGE++ G E I+ S+TG Sbjct: 570 ILRKLRDIGNTVIVVEHDREIIEAADIILDLGPKAGRHGGELIFHGTYEDILQSASSVTG 629 Query: 590 QYMSGKRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTL 649 +Y++GK I +P+KR + + +++ GA NNLK++ + P+G+ TC+TGVSGSGKSTL Sbjct: 630 KYLTGKNIIPLPEKRREPDFSRAIEVQGAMENNLKNLDVKFPLGVMTCVTGVSGSGKSTL 689 Query: 650 INDTLFPIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFT 709 + D L+ +Q G T + ++ + G E K+ +DQSPIGRT RSNPATY +F Sbjct: 690 VTDILYLGLLKQKVG-TAEKVGTHKALLGGEQISKIELVDQSPIGRTSRSNPATYLKIFD 748 Query: 710 PVRELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGK 769 +R +FA ++A+G+ PG FSFN+ GGRCE C G+GVI +EM FL DI C+ C G+ Sbjct: 749 EIRSIFAHTTYAKAKGWEPGYFSFNIPGGRCETCAGEGVIHIEMQFLADIETVCEDCHGR 808 Query: 770 RYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATT 829 RY ETL Y GK+I +VLDMT+ EA EFF AL+RKL L DVGL Y++LGQSA+T Sbjct: 809 RYKAETLSALYNGKSIADVLDMTVTEAIEFFQDHRALSRKLSILEDVGLGYLQLGQSAST 868 Query: 830 LSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIE 889 LSGGEAQR+KLA +S + L+I DEPTTGLHF DIQ+L+ ++L QGNT+++IE Sbjct: 869 LSGGEAQRLKLALHISSIESRNALFIFDEPTTGLHFDDIQKLIQCFNQLLAQGNTLIIIE 928 Query: 890 HNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLKPML 940 HNLDVIK ADWI+DLGP+ G+ GGEI+ +G PE++A EAS T ++LK L Sbjct: 929 HNLDVIKQADWIIDLGPDAGNRGGEIVAAGVPESIAAAEASFTGKYLKEYL 979 >UniRef50_D0LQB5 Excinuclease ABC, A subunit n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LQB5_HALO1 Length = 996 Score = 1082 bits (2798), Expect = 0.0, Method: Composition-based stats. Identities = 509/994 (51%), Positives = 657/994 (66%), Gaps = 63/994 (6%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 63 + VRGAR HNL N+++ IPRD L+V+TG SGSGKSSLAFDT+YAEGQRRYVESLSA+ARQ Sbjct: 5 LSVRGARVHNLANVDIDIPRDALVVITGPSGSGKSSLAFDTIYAEGQRRYVESLSAHARQ 64 Query: 64 FLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCPDH 123 +L LM +P+ D IEGLSPAI+I Q S NPRS+VGT+TEI+DYLRLL+ARVG C Sbjct: 65 YLELMARPECDSIEGLSPAIAIAQHSAVRNPRSSVGTLTEIYDYLRLLYARVGTVHCYQC 124 Query: 124 DVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARIDGEV 183 +AA TVS++VD + G R +++AP+I+ G H L L GY RA +DG + Sbjct: 125 GRVIAANTVSEIVDRTMELGTGARFIVVAPVIRGVAGTHADALGALLQAGYPRAVVDGTL 184 Query: 184 CDLSD-PPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVADMDDPKA 242 DL++ P+L+ HT+E+ VDR V+D +++RLA+S E AL L+ G + + A Sbjct: 185 LDLAEGIPELDEHAPHTVEIHVDRLIVKDGISRRLADSLELALGLADGQVWIHPV---GA 241 Query: 243 EELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPELSL 302 E +S FAC CG S ELEPR+FSFN+P GAC CDGLG DP RVI PELSL Sbjct: 242 EPERYSQRFACLACGISYPELEPRMFSFNSPHGACQRCDGLGELAALDPARVIPAPELSL 301 Query: 303 AGGAIRGWDRRNFYYFQMLKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKENI------ 356 + GAI R+ + + + +++ PW LSA VL G+ I Sbjct: 302 SAGAIAPLPPRSAL-GRRVAAACAARGIELDTPWRELSAEHQAFVLGGADDTVIGQSSDS 360 Query: 357 -------EFKYMNDRGDTSIRRHPFEGVLHNMERRYKETE-------SSAVR-------- 394 K + R PFEGVL + E E S R Sbjct: 361 STKTPAKTAKTKTTAKKAAARDRPFEGVLALLATELAEAEPREGDDPSDGERASKAKGKV 420 Query: 395 ---------------EELAKFISNRPCASCEGTRLRREARHVYVENTPLPAISDMSIGHA 439 +EL + PC +CEGTRLR EARHV V LPA+ + + A Sbjct: 421 TGKRPGKRSTAALSLDELRTCVRELPCPACEGTRLRVEARHVTVGGLALPAVCRLPLDEA 480 Query: 440 MEFFNNL-------KLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEA 492 + FF L L+ QRA IAE++L+EI RL FL VGL YL+L+R A TLSGGE+ Sbjct: 481 LAFFTELGQSDGEHSLSPQRAAIAERLLREIAGRLGFLQRVGLGYLSLARRASTLSGGES 540 Query: 493 QRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIR 552 QRIRLA+QIGA LVGV+YVLDEPS+GLH RD RL+ L+ LRDLGNTV+VVEHD D +R Sbjct: 541 QRIRLATQIGASLVGVLYVLDEPSVGLHPRDTRRLIDALLRLRDLGNTVLVVEHDPDTMR 600 Query: 553 AADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEVPKKRVPANPEKV 612 AAD+++DIGPGAGVHGG VVA GP +MA P SLTGQY+SG R + VP +R Sbjct: 601 AADYLVDIGPGAGVHGGRVVAHGPPAQVMADPASLTGQYLSGARALAVPPQRR--GGAHA 658 Query: 613 LKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGAT------ 666 L+L G R +NL+ V + +P+G C+TGVSGSGKS+LI TL P + +L G Sbjct: 659 LRLEGVRTHNLRGVDVAIPLGALVCVTGVSGSGKSSLITGTLLPALRARLTGGARGASRG 718 Query: 667 IAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESRARGY 726 + + + I+G++ D+V+ +DQ+PIGRTPRSNPATYTGVF +RE FA +PES+ARGY Sbjct: 719 VLDDGDFDAIRGVDQVDRVLSVDQAPIGRTPRSNPATYTGVFALIRERFAALPESKARGY 778 Query: 727 TPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKYKGKTIH 786 GR+SFNV+GGRCEACQGDGV+++EM+FLPD+YV C+ C G R++RETL+++YKG I Sbjct: 779 KSGRYSFNVKGGRCEACQGDGVLRIEMNFLPDVYVTCESCGGTRFSRETLDVRYKGLNIA 838 Query: 787 EVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSK 846 EVL + ++EA F+ AVP + +L+ L DVGL Y+ LGQ A TLSGGEAQR+KL+REL+K Sbjct: 839 EVLALRVDEALSFWQAVPQIRVRLEALRDVGLGYLTLGQPANTLSGGEAQRLKLSRELAK 898 Query: 847 RGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADWIVDLGP 906 + TG+T+YILDEPTTGLHF D+++LL VL L +QGNT++VIEH+LDVIKTAD ++D+GP Sbjct: 899 KSTGRTIYILDEPTTGLHFEDVRRLLHVLELLVEQGNTVLVIEHDLDVIKTADHVIDVGP 958 Query: 907 EGGSGGGEILVSGTPETVAECEASHTARFLKPML 940 EGG+ GG I+ +GTPE +A SHT R L P+L Sbjct: 959 EGGAAGGAIVAAGTPEDIAAAADSHTGRLLAPLL 992 Score = 91.9 bits (227), Expect = 1e-16, Method: Composition-based stats. Identities = 38/115 (33%), Positives = 56/115 (48%), Gaps = 6/115 (5%) Query: 610 EKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAE 669 L + GAR +NL +V + +P ITG SGSGKS+L DT++ QR+ + A Sbjct: 2 SPALSVRGARVHNLANVDIDIPRDALVVITGPSGSGKSSLAFDTIYAEGQRRYVESLSAH 61 Query: 670 PAPYRDI------QGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGV 718 Y ++ +E I I Q R PRS+ T T ++ +R L+A V Sbjct: 62 ARQYLELMARPECDSIEGLSPAIAIAQHSAVRNPRSSVGTLTEIYDYLRLLYARV 116 >UniRef50_B5JM86 Excinuclease ABC, A subunit n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JM86_9BACT Length = 949 Score = 1081 bits (2797), Expect = 0.0, Method: Composition-based stats. Identities = 449/944 (47%), Positives = 607/944 (64%), Gaps = 13/944 (1%) Query: 2 DKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYA 61 + I ++GAR HNLKNI L IPR+KL+V+TG+SGSGKSSLAFDTLYAEG R+YVESLS A Sbjct: 9 EYIHIKGAREHNLKNIELRIPRNKLVVITGVSGSGKSSLAFDTLYAEGYRKYVESLSTQA 68 Query: 62 RQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCP 121 RQ + +++PDVD I GLSP ++IEQ++++ +PRST+ T+TEI DY RLL+ GE RCP Sbjct: 69 RQVMDQLKRPDVDFIHGLSPVLAIEQRASNASPRSTIATVTEIADYARLLWVIRGEQRCP 128 Query: 122 DHDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARIDG 181 + QT+ VD L PE R M+LAP ++ + + L L +G+ R RI G Sbjct: 129 KDGGIIQRQTLDGAVDQALQLPERSRAMVLAPYMEAKPAVLREELPRLRQKGFQRVRIAG 188 Query: 182 EVCDLSDPPKLELQK-KHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVADMD-- 238 E+ ++ DP + +++VVDR + D RLA+S E A A+V + Sbjct: 189 EIVEVDDPEAATKGRSAVQMDIVVDRLVIGPDQRSRLADSLELAFSEGKDRALVLYQESR 248 Query: 239 DPKAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNP 298 D +EL S NF+C CG + PR FSFN G+CP C GLG + F + V+ +P Sbjct: 249 DADWQELSLSRNFSCSDCGEVYEPVTPRHFSFNTAEGSCPECGGLGETRRFLDELVVPDP 308 Query: 299 ELSLAGGAIRGWDRRN----FYYFQMLKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKE 354 S+ GA++ + +L+ LA+ FD PW L + +L+G Sbjct: 309 SKSVKKGALKPLRIGGKQLIIRHNALLRQLAEQLPFDPLTPWEDLPEETRQQILHGVPDR 368 Query: 355 NIEFKYMNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGTRL 414 EFK R T PFEG++ + + +ET+S R L + + + C C G R Sbjct: 369 EFEFKLT--RRKTKPAPAPFEGIVPILMKAARETKSDGYRARLMTYQTEQDCPGCHGHRF 426 Query: 415 RREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNVG 474 + +V+V+ LP M I A F + L A ++++ I RL+FL VG Sbjct: 427 SPRSANVFVDGVSLPEFLAMDIEKAYAFVSKLDRASSEVSTYGEVIEGIEFRLRFLKEVG 486 Query: 475 LNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHL 534 L+YLTL+R TLSGGE+QR+RLA+Q+G L+GV+YVLDEPSIGLH +DN +L+ TL L Sbjct: 487 LDYLTLNRGYGTLSGGESQRVRLATQLGMSLMGVVYVLDEPSIGLHAKDNLKLVQTLKEL 546 Query: 535 RDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESL--TGQYM 592 RD+GN+VIVVEHDE+ +RAADH+I+IGPGAG+HGGEV+ EG + + P+ + TG Y+ Sbjct: 547 RDVGNSVIVVEHDEEMMRAADHLIEIGPGAGLHGGEVLYEGDPKKCIGNPDRMQSTGAYL 606 Query: 593 SGKRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLIND 652 SGK ++ EK +++ A +NLK+ T +PVGL TC+TGVSGSGKSTL+ND Sbjct: 607 SGK-QVLTKGVPTLELTEKWIEIKEASHHNLKNATARIPVGLLTCVTGVSGSGKSTLVND 665 Query: 653 TLFPIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVR 712 L A R+LN + P ++ I G E+F++V+ + Q PIG++PRSNPATYT +F +R Sbjct: 666 ILAKAAARKLNRSKDI-PGAHKGIDGFEYFERVVRVSQEPIGQSPRSNPATYTKLFDELR 724 Query: 713 ELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYN 772 L+ VP SR RGY GRFSFN+RGGRCE CQG G IK++M F+ D Y+ C C GKRYN Sbjct: 725 TLYTKVPLSRTRGYKAGRFSFNIRGGRCERCQGQGAIKLDMLFMSDAYIECPSCNGKRYN 784 Query: 773 RETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSG 832 RETLE KY G I E L+++++EA E F VP + KL TL VGL Y++LGQ+A TLSG Sbjct: 785 RETLEAKYGGINIAEALELSVDEACEKFKNVPRIIEKLNTLEQVGLGYLKLGQAANTLSG 844 Query: 833 GEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNL 892 GEAQR+KL+ ELSKR +G+ LYILDEPTTGLH+ADIQ+L D+L +LRDQGNT+VVIEH+L Sbjct: 845 GEAQRLKLSLELSKRNSGKNLYILDEPTTGLHWADIQRLSDLLFRLRDQGNTVVVIEHHL 904 Query: 893 DVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFL 936 D I ADW +DLGP GGS GGE++ SG+ + + +C S T L Sbjct: 905 DFIGLADWAIDLGPGGGSRGGEVVYSGSVDGMLKCRRSETGMAL 948 Score = 87.7 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 36/117 (30%), Positives = 55/117 (47%), Gaps = 6/117 (5%) Query: 604 RVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQL- 662 R + + + + GAR +NLK++ L +P ITGVSGSGKS+L DTL+ R+ Sbjct: 2 RPVLSQSEYIHIKGAREHNLKNIELRIPRNKLVVITGVSGSGKSSLAFDTLYAEGYRKYV 61 Query: 663 -----NGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVREL 714 + + D+ + V+ I+Q +PRS AT T + R L Sbjct: 62 ESLSTQARQVMDQLKRPDVDFIHGLSPVLAIEQRASNASPRSTIATVTEIADYARLL 118 >UniRef50_B8I0Z8 Excinuclease ABC, A subunit n=1 Tax=Clostridium cellulolyticum H10 RepID=B8I0Z8_CLOCE Length = 993 Score = 1081 bits (2795), Expect = 0.0, Method: Composition-based stats. Identities = 412/953 (43%), Positives = 610/953 (64%), Gaps = 24/953 (2%) Query: 2 DKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYA 61 +I V GA HNLKNIN+ +P++KLIV TG+SGSGKS+L FDT+YAE QRR+V+ LS+ + Sbjct: 31 KEIVVEGACHHNLKNINITLPKNKLIVFTGVSGSGKSTLVFDTIYAEAQRRFVDGLSSTS 90 Query: 62 RQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCP 121 ++ + KP VD I GLSPAI+I+QKS +NPRSTVGT+TEI DYLR+L+ ++G P C Sbjct: 91 KRHFEKVGKPSVDKIYGLSPAIAIQQKSLGNNPRSTVGTLTEISDYLRILYEKIGIPYCL 150 Query: 122 DHDVPLAAQTVSQMVDNVLS-QPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARID 180 + P+ QT ++ +++ G+ ++ AP++ ++ + ++ L G+ + R+D Sbjct: 151 NCGTPIYKQTPREIAESICKKFSAGESFIIYAPLLTQKTNDINSSIRELFQGGFRKLRLD 210 Query: 181 GEVCDLSDPPKLELQKKHTIEVVVDRFKVRD--------DLTQRLAESFETALELSGGTA 232 + D+++ ++ +I+V+ F + + + R+ L + GT Sbjct: 211 SNIIDITEETRISQTGNLSIDVISKEFFLPNVLGKENNTEFIDRVTAEIRNLLLYTKGTL 270 Query: 233 VVADMDDPKAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPD 292 + + L +SA C C E+ + FS+N P G CP C GLGV+Q P Sbjct: 271 EIV---SNSGKILYYSAEQICARCHTVFPEITIQHFSYNTPIGMCPDCRGLGVEQEISPL 327 Query: 293 RVIQNPELSLAGGAIRGWD-----RRNFYYFQMLKSLADHYKFDVEAPWGSLSANVHKVV 347 +I + +S+ GA++ + +++ + L L +HY D+E PW L ++ Sbjct: 328 LLIDDENVSILDGALKWFGNLRDGKKSTWPTGPLDILFEHYNLDIETPWSKLPEWFRNII 387 Query: 348 LYGSGKENIEFKYMNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCA 407 LYGSG+E ++++ D +G++ + R Y +T+S R++ ++ ++PC Sbjct: 388 LYGSGEEKLKYRSAQGMKD---NYKAVKGLVPELTRLYYDTDSEHTRKKYGDYMVSKPCK 444 Query: 408 SCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNL--KLAGQRAKIAEKILKEIGD 465 +C+GTRL EAR + V N + ++ +SI AM++ + L + ++++++L EI + Sbjct: 445 ACKGTRLCPEARSIKVGNLTISEVNALSIDDAMKWILEIYNSLDNKTWELSKELLMEIYN 504 Query: 466 RLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNE 525 RL LV+VGLNYL+L+R+A TLSGGE QR+RLA Q+ +G+V V+YVLDEPS GLH +D + Sbjct: 505 RLSLLVDVGLNYLSLNRTAPTLSGGEGQRVRLACQLNSGIVDVLYVLDEPSTGLHPKDTK 564 Query: 526 RLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPE 585 +L+ T+ LRDLGNTV+VVEH++D ++ AD ++DIGP AG GG V+AEG + ++A Sbjct: 565 KLIQTMQRLRDLGNTVLVVEHEQDIMKNADWLVDIGPKAGNGGGYVMAEGTPDVVLADNN 624 Query: 586 SLTGQYMSGKRKIEVPK-KRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGS 644 SLT QY+ GK K+ + + + N K L L G + NNLK+VT +P+G TCITGVSGS Sbjct: 625 SLTAQYLCGKLKVGLKRVPKDVRNQGKWLILKGVKYNNLKNVTARIPIGSLTCITGVSGS 684 Query: 645 GKSTLINDTLFPIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATY 704 GKS+LI L P+ R++NG + Y + G E+ DK++++ QSPIGR P SNPATY Sbjct: 685 GKSSLIGGVLEPLLNRRINGG-LDPVGKYESLTGDEYLDKLVNVSQSPIGRRPTSNPATY 743 Query: 705 TGVFTPVRELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCD 764 TG+F +R++FA ++ +G+ FSFN GRCE C+G G IK+EMHFLPD+++PC Sbjct: 744 TGLFDKIRKVFANTEYAKEKGFNSEYFSFNSNKGRCEICEGQGQIKIEMHFLPDVWIPCT 803 Query: 765 QCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLG 824 +C GKR+ + L+ K+K K I EVL+M +E+A FF + LQTL DVGL YI+LG Sbjct: 804 ECGGKRFKADILKAKFKDKDISEVLEMDVEKALSFFIGYKDIVGILQTLKDVGLDYIKLG 863 Query: 825 QSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNT 884 QSATTLSGGEAQRVKLA+ELS + G +YILDEPTTGLHF DIQ LL V +L D G+T Sbjct: 864 QSATTLSGGEAQRVKLAKELSTKVKGSMIYILDEPTTGLHFNDIQHLLKVFQRLVDIGHT 923 Query: 885 IVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLK 937 +VVIEH+L++IK ADW++DLGPEGG+ GGEI+ GT E + S+T + LK Sbjct: 924 LVVIEHDLNIIKMADWVIDLGPEGGADGGEIIAQGTVEDILNNPNSYTGQALK 976 Score = 97.7 bits (242), Expect = 2e-18, Method: Composition-based stats. Identities = 44/147 (29%), Positives = 66/147 (44%), Gaps = 11/147 (7%) Query: 578 EAIMAVPESLTGQYMSGKRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTC 637 E I V T + ++ I K + + GA +NLK++ +TLP Sbjct: 3 EDIEIVKREFTSRRSFPRKIIS-----DERCSSKEIVVEGACHHNLKNINITLPKNKLIV 57 Query: 638 ITGVSGSGKSTLINDTLFPIAQRQLNGATIAEPAPYRDIQGLEHFDKV------IDIDQS 691 TGVSGSGKSTL+ DT++ AQR+ + + + G DK+ I I Q Sbjct: 58 FTGVSGSGKSTLVFDTIYAEAQRRFVDGLSSTSKRHFEKVGKPSVDKIYGLSPAIAIQQK 117 Query: 692 PIGRTPRSNPATYTGVFTPVRELFAGV 718 +G PRS T T + +R L+ + Sbjct: 118 SLGNNPRSTVGTLTEISDYLRILYEKI 144 >UniRef50_C1A9P0 UvrABC system protein A n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A9P0_GEMAT Length = 958 Score = 1081 bits (2795), Expect = 0.0, Method: Composition-based stats. Identities = 444/970 (45%), Positives = 600/970 (61%), Gaps = 53/970 (5%) Query: 2 DKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYA 61 D I +RGAR HNLK +L IPR + VVTG+SGSGKSSLAFDTLYAEGQRRYVESLSAYA Sbjct: 3 DTIRIRGARQHNLKGFDLDIPRRAITVVTGVSGSGKSSLAFDTLYAEGQRRYVESLSAYA 62 Query: 62 RQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCP 121 RQFL MEKP VD IEG+SPA++IEQK+ + RSTVGT TEI+DYLRLL+ARVG CP Sbjct: 63 RQFLERMEKPAVDSIEGISPAVAIEQKNPTRTSRSTVGTATEIYDYLRLLWARVGRTYCP 122 Query: 122 DHDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARI-- 179 L TV + D VL+ PEG R ++ P+++ K H ENL ++G++R + Sbjct: 123 KCGRELRPDTVQSVTDAVLALPEGTRFLVACPLVRSSKVSHAVIAENLRARGFVRVAVPA 182 Query: 180 --DGEVCDLSD--PPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVA 235 EV L D L L + + +VVDR +V R+A++ +TA G A + Sbjct: 183 THGVEVLHLDDVTEETLNLATRENVSIVVDRLRVEPSARGRIADAVQTAFTEGDGDARIL 242 Query: 236 DMD----------------DPKAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPT 279 + +L F+ F CP G P+LFSFNNP GACPT Sbjct: 243 LTEAIVPPESIAERVGAAPGNAVWQLAFTERFECPNDGTRAPSPTPQLFSFNNPRGACPT 302 Query: 280 CDGLGVQQYFDPDRVIQNPELSLAGGAIRGWDRRNF-YYFQMLKSLADHYKFDVEAPWGS 338 C+G G +D ++ +PE SL GAI W + +++ A + PW + Sbjct: 303 CNGFGATLDYDLALIVPHPERSLRDGAIDPWTAPRYEKQRRLVVDFARTLGVSADVPWST 362 Query: 339 LSANVHKVVLYGSGKENIEFKYMNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELA 398 L A + +L + G+L +E ++ +R L Sbjct: 363 LPAEAQQKLL-------------------RTTSRAYTGILPFLEALEEKKYKQYIRIFLR 403 Query: 399 KFISNRPCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEK 458 ++ S RPC C GT+L+ EA V V+ + ++ + + + L L+G A IA+ Sbjct: 404 QYQSARPCRDCGGTKLQPEALQVRVDGRTIAEVAQWPVRDLRTWIDALTLSGSDAVIADA 463 Query: 459 ILKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIG 518 +L+E R +FL +VGL YLTL R+ TLSGGEAQRI L++ +GA LV YVLDEPSIG Sbjct: 464 VLREARARTRFLTDVGLTYLTLDRATRTLSGGEAQRITLSNALGAALVDATYVLDEPSIG 523 Query: 519 LHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLE 578 LH RD +RLL L LRDLGNTV++VEHD +A+R AD+++++GP AG HGG+VV GP+ Sbjct: 524 LHSRDLDRLLSLLTRLRDLGNTVVMVEHDLEAMRIADYMVEMGPAAGEHGGQVVFAGPMA 583 Query: 579 AIMAVPESLTGQYMSGKRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCI 638 + P LTGQY++G R+IEVP KR P P + L+L GAR +N+ V L +P+G T + Sbjct: 584 DVEQSP--LTGQYLTGARRIEVPTKRRPVGP-RWLELKGARAHNVHGVDLRIPLGAMTVV 640 Query: 639 TGVSGSGKSTLINDTLFPIAQRQLNGATIAEP------APYRDIQGLEHFDKVIDIDQSP 692 TGVSGSGKST+++D LF + +L+G A+ Y + G EH D V+ +DQSP Sbjct: 641 TGVSGSGKSTMVHDVLFHALESRLHGEHSAKEHLGETVGGYTSLTGFEHLDDVVLVDQSP 700 Query: 693 IGRTPRSNPATYTGVFTPVRELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVE 752 IG++PRSNP TY F VR LFA P S+ +G+ G FSFNV GGRC+ C+G G I+VE Sbjct: 701 IGKSPRSNPVTYVKAFDEVRRLFAESPLSKTKGFAAGHFSFNVAGGRCDHCEGAGAIEVE 760 Query: 753 MHFLPDIYVPCDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQT 812 M F+ D++VPCD C GKR+ E LE++ +GK I +VL++T++EA FF LA+ L Sbjct: 761 MVFMADVFVPCDACGGKRFKPEVLEVRVRGKNIADVLELTVDEAIRFFPREDKLAQALWH 820 Query: 813 LMDVGLTYIRLGQSATTLSGGEAQRVKLARELS--KRGTGQTLYILDEPTTGLHFADIQQ 870 + VGL Y+RLGQ ATTLSGGEAQR+K+AREL+ RG + LY++DEPTTGLH DI++ Sbjct: 821 VQQVGLGYLRLGQPATTLSGGEAQRLKIARELALTARGAARKLYVMDEPTTGLHLEDIRR 880 Query: 871 LLDVLHKLRDQGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEAS 930 L V +L QG+T+++IEH+LDVIK ADWIVD+GP+GG GGG+++ G PE + + AS Sbjct: 881 LAQVFERLLSQGHTLLLIEHHLDVIKLADWIVDMGPDGGDGGGQVVAMGRPEEIVQVAAS 940 Query: 931 HTARFLKPML 940 HT R+L+ +L Sbjct: 941 HTGRWLRTVL 950 >UniRef50_Q027K1 Excinuclease ABC subunit A n=2 Tax=Bacteria RepID=Q027K1_SOLUE Length = 960 Score = 1079 bits (2790), Expect = 0.0, Method: Composition-based stats. Identities = 440/951 (46%), Positives = 606/951 (63%), Gaps = 15/951 (1%) Query: 3 KIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYAR 62 I V+GAR HNLKN++L +PRD+LIVVTGLSGSGKSSLAFDT+YAEGQRRY+ESLS YA+ Sbjct: 11 TIAVQGARVHNLKNVSLTLPRDRLIVVTGLSGSGKSSLAFDTIYAEGQRRYMESLSTYAK 70 Query: 63 QFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCPD 122 +F++ + KPDVD + GLSP ISIEQK+ NPRSTVGT+T+I YL LLFA + EP CP Sbjct: 71 RFVAQVAKPDVDFVFGLSPVISIEQKTIGSNPRSTVGTMTDIASYLNLLFATIAEPHCPR 130 Query: 123 HDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARIDGE 182 +A +T +Q+++ +L+ PEG + L AP+ E + +G + IDG Sbjct: 131 TGERVANRTANQILEAILALPEGTEIELRAPVFPVYGEELEFVFTEVRKKGCRQLVIDGR 190 Query: 183 VCDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVADMDDP-K 241 DL++ L+ + ++ VVDRF V + + L + G V + K Sbjct: 191 RVDLANELDLDETQVRDMDAVVDRFIVSAKHEKAIKAGIAATLLVGDGLMQVQILKGANK 250 Query: 242 AEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPELS 301 AE F ++ +EP F FNNP AC TC GLG+ + P+ ++ +P+ S Sbjct: 251 AEADRFYKGLCSATHHFTYGGIEPEFFMFNNPESACRTCGGLGIYKITHPELLVPDPKRS 310 Query: 302 LAGGAI---RGWDRRNFYYFQMLKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKENIEF 358 + GG + + +++ SL+ F ++ PW L A+ +L G ++ Sbjct: 311 VIGGCFVREAFKYNPDTWDGRVMYSLSKALPFALDTPWEKLPASARHAILNGIDRKIPVV 370 Query: 359 KYMND---RGDTSIRRHPFEGVLHNMERRYKETE-----SSAVREELAKFISNRPCASCE 410 + R D + F G+ +ER Y+ SS + + L K + R C C+ Sbjct: 371 MPPDGKVKREDWQGKEVGFGGIARRIERHYRRYRQRGEASSGMEQWLDKVMVERTCPDCK 430 Query: 411 GTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDRLKFL 470 G RLR V + + ++ F LK AG+ ++ +EI R++ L Sbjct: 431 GARLRATRLLFTVAGKSIHEVGGLNFDELHGFLGELKPAGRGGDAGRQVAREIRGRVELL 490 Query: 471 VNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGT 530 + +GL+YL L+R + TLSGGEAQRIRL++QIG+GL+G++YVLDEPSIGLH +DN +++ T Sbjct: 491 LGIGLDYLNLNRRSGTLSGGEAQRIRLSTQIGSGLMGMLYVLDEPSIGLHPKDNVKMIAT 550 Query: 531 LIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQ 590 L LRD+GNTVIVVEHDED IRAADH++++GPG GVHGG VV EG L +MA S TGQ Sbjct: 551 LESLRDIGNTVIVVEHDEDTIRAADHIVEMGPGPGVHGGRVVVEGTLSEVMACKGSPTGQ 610 Query: 591 YMSGKRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLI 650 ++SGKR+I P R N + ++ + GAR NNLK V +T P+G ITG SGSGKSTLI Sbjct: 611 FLSGKRRIATPSARRAGNGKTLI-VRGARENNLKSVDVTFPLGTLVAITGASGSGKSTLI 669 Query: 651 NDTLFPIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTP 710 N+ L+ ++L P + I+G EH KV++IDQSPIGR RSNPATY G + Sbjct: 670 NEILYKALWKRLVDTRTL-PGDHDGIEGGEHVHKVVNIDQSPIGRNSRSNPATYIGFYDT 728 Query: 711 VRELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKR 770 +R+LF P + RGY GRFSFNV+GGRCE CQG+GVI +++F+PD+ V C CKG R Sbjct: 729 IRDLFTRTPVAMERGYKAGRFSFNVKGGRCEECQGEGVITTQLYFMPDVEVTCAVCKGAR 788 Query: 771 YNRETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTL 830 + ETLE +GKTI +VL+M +EE EFF PA+++K++ L D+GL Y+ LGQSATTL Sbjct: 789 FGAETLEATLRGKTITDVLNMPVEEGVEFFANEPAVSKKIEVLNDLGLGYLTLGQSATTL 848 Query: 831 SGGEAQRVKLARELSK-RGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIE 889 SGGEAQR+K+A ELSK + + T+YILDEPTTGLH AD+++LL+ L++L D G+T++ IE Sbjct: 849 SGGEAQRIKIATELSKLQRSKHTVYILDEPTTGLHLADVEKLLECLNRLVDAGHTVLAIE 908 Query: 890 HNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLKPML 940 H+LDVIKTAD ++DLGPEGG GGE++ +GTPE +A C+ S+T RFLK L Sbjct: 909 HHLDVIKTADHVIDLGPEGGHAGGEVVATGTPEKIAACKTSYTGRFLKAHL 959 Score = 183 bits (464), Expect = 4e-44, Method: Composition-based stats. Identities = 76/197 (38%), Positives = 107/197 (54%), Gaps = 16/197 (8%) Query: 403 NRPCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKE 462 CA C+G R E + + + +M + +EFF N Sbjct: 778 EVTCAVCKGARFGAETLEATLRGKTITDVLNMPVEEGVEFFAN--------------EPA 823 Query: 463 IGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIG--AGLVGVMYVLDEPSIGLH 520 + +++ L ++GL YLTL +SA TLSGGEAQRI++A+++ +Y+LDEP+ GLH Sbjct: 824 VSKKIEVLNDLGLGYLTLGQSATTLSGGEAQRIKIATELSKLQRSKHTVYILDEPTTGLH 883 Query: 521 QRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAI 580 D E+LL L L D G+TV+ +EH D I+ ADHVID+GP G GGEVVA G E I Sbjct: 884 LADVEKLLECLNRLVDAGHTVLAIEHHLDVIKTADHVIDLGPEGGHAGGEVVATGTPEKI 943 Query: 581 MAVPESLTGQYMSGKRK 597 A S TG+++ K Sbjct: 944 AACKTSYTGRFLKAHLK 960 Score = 103 bits (258), Expect = 3e-20, Method: Composition-based stats. Identities = 39/117 (33%), Positives = 59/117 (50%), Gaps = 13/117 (11%) Query: 2 DKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYA 61 + VRGAR +NLK++++ P L+ +TG SGSGKS+L + LY +R V++ + Sbjct: 630 KTLIVRGARENNLKSVDVTFPLGTLVAITGASGSGKSTLINEILYKALWKRLVDTRTLPG 689 Query: 62 RQFLSLMEKPDVDHIEG---LSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARV 115 D D IEG + ++I+Q N RS T +D +R LF R Sbjct: 690 ----------DHDGIEGGEHVHKVVNIDQSPIGRNSRSNPATYIGFYDTIRDLFTRT 736 Score = 91.5 bits (226), Expect = 1e-16, Method: Composition-based stats. Identities = 40/119 (33%), Positives = 58/119 (48%), Gaps = 6/119 (5%) Query: 609 PEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIA 668 + + GAR +NLK+V+LTLP +TG+SGSGKS+L DT++ QR+ + Sbjct: 8 ARTTIAVQGARVHNLKNVSLTLPRDRLIVVTGLSGSGKSSLAFDTIYAEGQRRYMESLST 67 Query: 669 EPAPYRDIQGLEHFD------KVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPES 721 + D VI I+Q IG PRS T T + + + LFA + E Sbjct: 68 YAKRFVAQVAKPDVDFVFGLSPVISIEQKTIGSNPRSTVGTMTDIASYLNLLFATIAEP 126 >UniRef50_C9PZ01 Excision endonuclease subunit UvrA n=8 Tax=Bacteroidetes RepID=C9PZ01_9BACT Length = 983 Score = 1072 bits (2772), Expect = 0.0, Method: Composition-based stats. Identities = 411/960 (42%), Positives = 582/960 (60%), Gaps = 43/960 (4%) Query: 1 MDK-IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSA 59 MDK IE++G R +NLKNI+L IPR+K I + G+SGSGKSSLAFDTLYAEGQRRYVESLS+ Sbjct: 45 MDKHIELKGVRVNNLKNISLNIPRNKFIAIAGVSGSGKSSLAFDTLYAEGQRRYVESLSS 104 Query: 60 YARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPR 119 YARQFL M KP+ D I+GL PAI+IEQK + NPRSTVGT TEI++Y+RLLFAR+G+ Sbjct: 105 YARQFLGNMSKPECDFIKGLPPAIAIEQKVNTRNPRSTVGTSTEIYEYMRLLFARIGKTF 164 Query: 120 CPDHDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARI 179 P + +V ++ G + ++LAPI K L +GY R Sbjct: 165 SPISGQEVKKHSVEDVIQCTKQYSNGTKFVVLAPIHVPEGRTFEKQLNMFVQEGYARLWH 224 Query: 180 DGEVCDLSD----PPKLELQKKHTIEVVVDRFKVRD--DLTQRLAESFETALELSGGTAV 233 G+ + D +L+ K +++DR V D + RL +S ETA+ G Sbjct: 225 KGDFVRIDDLTENAERLKDSKPDEYLLLIDRLAVDDTKEHISRLTDSVETAMYEGHGECR 284 Query: 234 VADMDDPKAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDR 293 + + P FS+ F G + E +F+FN+P GACP+C+G G + Sbjct: 285 LVFL--PSNITYEFSSRFE--TDGMTFDEPSDNMFAFNSPLGACPSCEGFGKVIGIEESL 340 Query: 294 VIQNPELSLAGGAIRGW--DRRNFYYFQMLKSLADHYKFDVEAPWGSLSANVHKVVLYGS 351 VI N LS+ G ++ W D+ + + + A F + P+ LS ++ +G Sbjct: 341 VIPNSTLSVYDGCVQCWHGDKMGIWKEEFCRRAAKD-DFPIFKPYFELSRKEKDMLWHGL 399 Query: 352 GKEN---IEFKYMNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCAS 408 E I + D +R + + R L ++ C Sbjct: 400 PSEKGRDISEQVSIDAFFQMVRENQY---------------KIQYRVMLNRYRGKTTCPE 444 Query: 409 CEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDRLK 468 C GTRL++EA V ++ + + +M IG +F+NL+L AKIA ++L EI +RL+ Sbjct: 445 CHGTRLKKEATWVKIDGMSIADLVEMPIGKLKTWFDNLQLNDYDAKIAARLLTEINNRLQ 504 Query: 469 FLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLL 528 FL++VGL+YLTL+R + TLSGGE+QRI+L + +G+ LVG +Y+LDEPSIGLH RD +RL+ Sbjct: 505 FLLDVGLHYLTLNRQSNTLSGGESQRIQLTTSLGSSLVGSLYILDEPSIGLHSRDTDRLI 564 Query: 529 GTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAV----- 583 L L +GNTVIVVEHDED +R ADH+ID+GP AG GGE+V GP I Sbjct: 565 KVLNDLVQIGNTVIVVEHDEDILRKADHLIDVGPDAGRLGGEIVFNGPASDIKKAALDRY 624 Query: 584 PESLTGQYMSGKRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSG 643 P S T Y++G KI+ P R N ++L GAR NNLK + +T P+ + T ITGVSG Sbjct: 625 PSSHTVAYLTGADKIDTPISRRKWNQS--IQLKGARMNNLKGIDVTFPLNVLTVITGVSG 682 Query: 644 SGKSTLINDTLFPIAQRQLNGATIAEPAPYRDIQG-LEHFDKVIDIDQSPIGRTPRSNPA 702 SGKS+LI L P +R + G P + ++G L+ + +DQ+PIGR+ RSNPA Sbjct: 683 SGKSSLIKGILHPALKRSM-GDVADAPGEFIALEGDLKQVKHIEFVDQNPIGRSTRSNPA 741 Query: 703 TYTGVFTPVRELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVP 762 TY + P+R+LFA P ++ G++ FSFN GGRCE C G GVI VEM F+ D+ + Sbjct: 742 TYVKAYEPIRQLFANQPLAKQLGFSAQYFSFNAEGGRCEECNGAGVITVEMQFMADLVLE 801 Query: 763 CDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAVP--ALARKLQTLMDVGLTY 820 C+ C G+R+ ++ L+++Y+GK I+++LDMT+ EA EFF + ++ +LQ L DVGL Y Sbjct: 802 CETCHGQRFKQDVLDVRYEGKNINDILDMTVSEAIEFFTSHKQTSVVNRLQPLEDVGLGY 861 Query: 821 IRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRD 880 I+LGQ+++TLSGGE QRVKLA + + TL+I DEPTTGLHF DI++LL + L + Sbjct: 862 IKLGQNSSTLSGGENQRVKLAYFIGQEKAEPTLFIFDEPTTGLHFHDIKRLLRAMGALIE 921 Query: 881 QGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLKPML 940 +G++++VIEHN+DVIK AD ++DLGP+GG GG+++ +GTPE +A C+ S T ++LK L Sbjct: 922 RGHSVIVIEHNMDVIKCADHVIDLGPDGGDRGGKLVFAGTPEELANCKESITGKYLKAQL 981 >UniRef50_Q3B5F8 Excinuclease ABC subunit A n=11 Tax=Chlorobiaceae RepID=Q3B5F8_PELLD Length = 956 Score = 1068 bits (2763), Expect = 0.0, Method: Composition-based stats. Identities = 414/955 (43%), Positives = 578/955 (60%), Gaps = 39/955 (4%) Query: 1 MDKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAY 60 + I ++G THNL+NI++ IPR++ +V+TG+SGSGKSSLAFDTLYAEG RRYVESLSAY Sbjct: 16 LPDIVLKGITTHNLQNISVRIPRNRFVVLTGVSGSGKSSLAFDTLYAEGHRRYVESLSAY 75 Query: 61 ARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRC 120 RQFL M +P+++ +EG++PAI+IEQ+S NPRSTVGT++EI+DYLRLL+AR+G+ Sbjct: 76 VRQFLERMPRPEIEVVEGIAPAIAIEQRSIPRNPRSTVGTVSEIYDYLRLLYARIGKIYS 135 Query: 121 PDHDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEH-----TKTLENLASQGYI 175 D + + T +V EG + G H + + NL +G+ Sbjct: 136 RDTNELVLKHTPDDVVMQAGFFLEGTKFYAGFLFPSHEDGSHHLCTVDEEISNLLKKGFF 195 Query: 176 RARIDGEVCDLSDPPK------LELQKKHTIEVVVDRFKVRDD--LTQRLAESFETALEL 227 R V DL+ P + + + V+VDRF R D R+AE+ E+ Sbjct: 196 RVVSGDTVLDLNSPDDCRKVAMMSEAARRALLVLVDRFVTRHDKKFQSRVAEAAESCFSE 255 Query: 228 SGGTAVVADMDDPKAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQ 287 SGG AV+ + + FS + G +E P+LF+FN+P GAC TC G G Sbjct: 256 SGGHAVLQVV---GGKTYRFSDRLE--LNGIEYQEPSPQLFAFNSPIGACTTCQGFGRIA 310 Query: 288 YFDPDRVIQNPELSLAGGAIRGWDRRNF-YYFQMLKSLADHYKFDVEAPWGSLSANVHKV 346 D V+ + L+LA GAI W+ + + + L A V+ P+ LS + Sbjct: 311 GIDEHAVVPDRSLTLAEGAIVCWNSEKYRWNLEELLLAAPKAGIPVDVPYEKLSHAEKER 370 Query: 347 VLYGSGKENIEFKYMNDRGDTSIRRHPFEGVLHNMERRYKET-ESSAVREELAKFISNRP 405 + G + G+ K+ R L+++ Sbjct: 371 IWKGVPG------------------TGYRGIWPFFAEIEKDAGYKMHFRVFLSRYRGYAI 412 Query: 406 CASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGD 465 C CEG+RL +AR V V + ++ M+I A FF NL+++ K+AE +++EI Sbjct: 413 CPDCEGSRLNPDARLVRVSGRNITDVARMNIADAHAFFKNLEISPFDRKVAESVIEEIEK 472 Query: 466 RLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNE 525 RL +L++VGL+YLTL R TLSGGE QRI L++ +G+ LVG +Y+LDEPSIGLHQ D+ Sbjct: 473 RLGYLLDVGLDYLTLDRLTHTLSGGEFQRINLSTSLGSPLVGAIYILDEPSIGLHQSDSA 532 Query: 526 RLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPE 585 RL+ L LRDLGNTV+VVEHD + I AAD VID+GP AG GGEVV G +E + Sbjct: 533 RLITLLQKLRDLGNTVVVVEHDREIIEAADEVIDLGPQAGRLGGEVVFHGSVEEMKRSGT 592 Query: 586 SLTGQYMSGKRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSG 645 S+T +Y+ +R I +P+ R + +++ GA NNLK++ + P+G+ TC+TGVSGSG Sbjct: 593 SMTAEYLQDRRSIPLPEVRRTPDFTACIEINGAMQNNLKNIDVRFPLGVMTCVTGVSGSG 652 Query: 646 KSTLINDTLFPIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYT 705 KSTL+ND L R+ G E +R I G D+V +DQSPIG++ RSNP TY Sbjct: 653 KSTLVNDILNRGLMREKEGVK-DEVGTHRAITGGWQIDRVEHVDQSPIGKSSRSNPVTYL 711 Query: 706 GVFTPVRELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQ 765 +F +R +FA P++RARG+ G FSFN+ GGRCEAC G+G +K+EM FL DI C++ Sbjct: 712 KIFDDIRSVFAQTPDARARGWKAGYFSFNIPGGRCEACSGEGSVKIEMQFLADIEAVCEE 771 Query: 766 CKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQ 825 C G RY +TLE+KY+G++I EVLDMT+EEA FF +++RKL L +VGL YIRLGQ Sbjct: 772 CGGLRYKADTLEVKYRGRSIAEVLDMTVEEALVFFAREKSISRKLGVLDEVGLGYIRLGQ 831 Query: 826 SATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTI 885 S++TLSGGEAQR+KLA +++ TL++ DEPTTGLHF DI++LL KL +Q NT+ Sbjct: 832 SSSTLSGGEAQRLKLASFIARADVEHTLFLFDEPTTGLHFEDIRKLLGCFSKLLEQHNTL 891 Query: 886 VVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLKPML 940 +VIEHN D+I ADW++DLGP G GG+++ GTPE +A E S T R L+P+ Sbjct: 892 IVIEHNPDIISQADWVIDLGPGAGDRGGQVIGEGTPEDLAGMEQSLTGRHLQPLF 946 >UniRef50_A3ZSW8 Excinuclease ABC subunit A n=1 Tax=Blastopirellula marina DSM 3645 RepID=A3ZSW8_9PLAN Length = 949 Score = 1068 bits (2763), Expect = 0.0, Method: Composition-based stats. Identities = 388/956 (40%), Positives = 560/956 (58%), Gaps = 41/956 (4%) Query: 3 KIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYAR 62 I++RG HNLK ++L + KLIV G+SGSGK+S+A DTLYAEGQRRY+ES SAY R Sbjct: 5 SIQLRGVEVHNLKKVDLDLDHRKLIVFCGVSGSGKTSMALDTLYAEGQRRYIESFSAYTR 64 Query: 63 QFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCPD 122 QFL +EKP + I+G+ PA+++ + + S + RSTVGT TE DYLRLLFA+VGE CP Sbjct: 65 QFLERLEKPAAESIDGIPPALAVTRGNDSRSNRSTVGTATETTDYLRLLFAKVGEIICPC 124 Query: 123 HDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARIDGE 182 + T ++ +L ++ML P+ +++ + + +L G++R + Sbjct: 125 CGAKIQRDTPQEVAQRILEMNSPGKMMLTFPVAPDQEETWEQVVADLREDGFVRVISGQQ 184 Query: 183 VCDLS-DPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTA--------- 232 +L+ D +L ++ + DR +RL ES ETA G Sbjct: 185 TLNLTTDSQQLN---GGAVQAIADRLSGEGLKAERLQESLETAFLHGEGVCQLLVESEEL 241 Query: 233 -------VVADMDDPKAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGV 285 ++ +D ++S C C E EPRLF+FN+P GAC C+G G Sbjct: 242 NGAGDHGILQQIDGRSWRRHVYSNQLRCDTCNLEFIEPEPRLFNFNSPLGACQACEGFGN 301 Query: 286 QQYFDPDRVIQNPELSLAGGAIRGWDRRNFYY-FQMLKSLADHYKFDVEAPWGSLSANVH 344 D D ++ + +LA GAI W+ +++ + L +LA Y P+ L+ Sbjct: 302 VIDMDMDLIVPDVSKTLADGAIAPWNTPAYHHELEELLALAKDYDLPTNVPFRELTEEHL 361 Query: 345 KVVLYGSGKENIEFKYMNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNR 404 +++ G + +G +ERR +R L+++ S R Sbjct: 362 RLIREGVPEREF---------------GGLKGFFQWLERR---KYKMHLRVFLSRWRSFR 403 Query: 405 PCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIG 464 C SC G RLR E+ V + + +S M I + EFF +LK+ + +A ++L ++ Sbjct: 404 DCESCHGKRLRPESLAVRIGGKNIAEVSKMKIRDSYEFFKSLKVDPRHQAVARQVLSQLL 463 Query: 465 DRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDN 524 DRLK+L VGL YL L R+ TLSGGEAQR+ L S +G+ LV ++YV DEPS+GLH D Sbjct: 464 DRLKYLNVVGLGYLALDRTIRTLSGGEAQRVALTSTLGSSLVNMLYVFDEPSVGLHPADV 523 Query: 525 ERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVP 584 ERL G + L GNTV++VEH+E IR AD +I+ GPGAG GGE++ +G + ++ Sbjct: 524 ERLAGAIRDLNKRGNTVVLVEHEESMIRRADEIIEFGPGAGERGGEIIFQGTPQELLTSE 583 Query: 585 ESLTGQYMSGKRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGS 644 E+LTG Y+ G+RK+ +KR +++ GARGNNLK++ + P+G+ +TGVSG+ Sbjct: 584 ETLTGDYLMGRRKVIHLEKRR-ETTHGRVRIKGARGNNLKNIEVEFPLGVLCVVTGVSGA 642 Query: 645 GKSTLINDTLFPIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATY 704 GKSTL+++TL+P R+ + D+ G D V+ +DQSPIGR+PRSNP TY Sbjct: 643 GKSTLVDNTLYPALCRR-KRKEAPKALDCDDVFGDGQIDDVVLVDQSPIGRSPRSNPVTY 701 Query: 705 TGVFTPVRELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCD 764 F +R +FA ++R +T FSFNV GGRC+AC GDG I ++M FL D+Y+ C Sbjct: 702 IKAFDEIRSVFAATVQARTHNFTASHFSFNVNGGRCDACDGDGHIAIDMQFLADVYMKCP 761 Query: 765 QCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLG 824 +CKG+RY ++ LE+ Y+GK I EVL+MTI EA FF P + KLQ L+DVGL Y+RLG Sbjct: 762 ECKGRRYKKDVLEVLYRGKNIAEVLNMTIREAFVFFRGQPKVQSKLQRLIDVGLDYLRLG 821 Query: 825 QSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNT 884 Q A TLS GEAQR+KLA L+ G+TL++LDEPTTGLHFADI QLLD + L G++ Sbjct: 822 QPANTLSAGEAQRLKLAGYLASSKRGRTLFLLDEPTTGLHFADIAQLLDCFNSLLQVGHS 881 Query: 885 IVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLKPML 940 ++V+EHNL ++ AD+I+D+GP GG+++ +GTPE VA+ E S T R L L Sbjct: 882 LIVVEHNLHMMMAADYIIDMGPGAADEGGQVVATGTPEEVAQNENSRTGRALAEAL 937 Score = 74.2 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 33/118 (27%), Positives = 51/118 (43%), Gaps = 6/118 (5%) Query: 609 PEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIA 668 P ++L G +NLK V L L GVSGSGK+++ DTL+ QR+ + A Sbjct: 2 PNTSIQLRGVEVHNLKKVDLDLDHRKLIVFCGVSGSGKTSMALDTLYAEGQRRYIESFSA 61 Query: 669 EPAPYR------DIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPE 720 + + ++ + + + R+ RS T T +R LFA V E Sbjct: 62 YTRQFLERLEKPAAESIDGIPPALAVTRGNDSRSNRSTVGTATETTDYLRLLFAKVGE 119 >UniRef50_C0ABC8 Excinuclease ABC, A subunit n=1 Tax=Opitutaceae bacterium TAV2 RepID=C0ABC8_9BACT Length = 1013 Score = 1059 bits (2740), Expect = 0.0, Method: Composition-based stats. Identities = 453/1001 (45%), Positives = 606/1001 (60%), Gaps = 70/1001 (6%) Query: 3 KIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYAR 62 I ++GAR HNLKN+ L IPR +L+V+TG SGSGKSSLAFDTLYAEG R+Y+ESLS AR Sbjct: 7 HIHIKGAREHNLKNLELRIPRGRLVVITGPSGSGKSSLAFDTLYAEGYRKYMESLSTQAR 66 Query: 63 QFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCPD 122 Q L +++PDVD I GLSP ++IEQ++ +PRST+ T+TEI DY RLL+A GE RCP Sbjct: 67 QVLEQLKRPDVDFIHGLSPVLAIEQRTGGGSPRSTIATVTEIADYARLLWALHGEQRCPK 126 Query: 123 HDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARIDGE 182 + +++ V +L G+R+MLLAP IK R + L L +G++R RIDGE Sbjct: 127 DGGRVVQRSLDDNVARILRDVPGQRIMLLAPAIKARPSVLREELPRLRQRGFLRVRIDGE 186 Query: 183 VCDLSDPPKLEL-QKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVADMDDPK 241 + L DP + ++ ++++VDR +D RLA+S E A ++ + Sbjct: 187 IKTLDDPRLIPTGTRELEVDLIVDRLVASEDQRSRLADSLELAFREGRDRVILLAQSNAA 246 Query: 242 --AEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPE 299 E S + AC +CG +L PR FSFN+ GACPTC G+G + F P+ ++ +PE Sbjct: 247 DPWTEHHLSQSLACEVCGDVFEKLTPRHFSFNHSEGACPTCGGIGRKLRFVPEFIVPDPE 306 Query: 300 LSLAGGAIRGWDRRN----FYYFQMLKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKEN 355 S+ GGAI+ W + +LK LA+ +D E PW L + +L+G+G+ Sbjct: 307 KSVRGGAIKPWRIGGKNLIIKHNALLKQLAEQLPYDPETPWKDLPESTRNTILHGAGERL 366 Query: 356 IEFKYMNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGTRL- 414 FK R R PF GV+ ++E ++ET+S R L ++ + C C G RL Sbjct: 367 FAFKLKRMREP---RAMPFAGVIADLEESFRETDSDGFRARLMTYMISDECPECHGVRLN 423 Query: 415 -------------------------------------------RREARHVYVENTP---- 427 + AR P Sbjct: 424 ARSSAVTVARASRPHPSPSGAGETPAPRVGASLAKPAYAEDGIKWRARASQATPLPAGET 483 Query: 428 ---------LPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNVGLNYL 478 + + + A L + +I+ I RL+FL+ GL YL Sbjct: 484 PAPLPPPLAITDFFRLDVAAAHALATELSATLSANEALREIVTGIEHRLRFLLETGLGYL 543 Query: 479 TLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLG 538 TL R +TLSGGEAQR+RLA+Q+G GL+GV+YVLDEPSIGLH DN +LL TL LRD G Sbjct: 544 TLDRDYDTLSGGEAQRVRLATQLGMGLMGVIYVLDEPSIGLHPHDNRKLLDTLRELRDRG 603 Query: 539 NTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVP--ESLTGQYMSGKR 596 NTV+VVEHDED +R AD +I++GP AG GG ++ +G A+ A P ++ TG Y++ K Sbjct: 604 NTVVVVEHDEDTMRIADEIIELGPEAGTEGGRILFQGTPAALSAAPARQTRTGPYLARKI 663 Query: 597 KIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFP 656 I P + L + AR NNL+ + P GL TC+TGVSGSGKSTL+ND L Sbjct: 664 SITNDAGNKPPDG-AFLTVREARANNLRGIDARFPAGLLTCVTGVSGSGKSTLVNDILAA 722 Query: 657 IAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFA 716 A R+LNGAT PAP+R I+ L+ F+K++ +DQSPIGR+PRSNPATYTG+ +R+LFA Sbjct: 723 AAARKLNGATKIHPAPHRAIEHLDFFEKLVQVDQSPIGRSPRSNPATYTGLLDLLRDLFA 782 Query: 717 GVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETL 776 VP ++ RGY RFSFNVRGGRCE CQGDGVIK++M F+ D Y PC C+G+R+NRETL Sbjct: 783 QVPLAKVRGYKASRFSFNVRGGRCERCQGDGVIKLDMQFMADAYAPCPSCEGRRFNRETL 842 Query: 777 EIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQ 836 EI + G++I +VL MT+ +A + F +P + KL TL VGL Y+ LGQSATTLSGGEAQ Sbjct: 843 EILFHGQSIADVLAMTVRDAIDLFRNIPRVMDKLATLDAVGLGYLTLGQSATTLSGGEAQ 902 Query: 837 RVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIK 896 R+KL+ ELSKR G TLYILDEPTTGLH+ DIQ L+D+L KLRD GNT++VIEHNLDVI Sbjct: 903 RLKLSLELSKRQQGATLYILDEPTTGLHWVDIQHLMDLLFKLRDAGNTLIVIEHNLDVIN 962 Query: 897 TADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLK 937 ADW++DLGP GGS GGE++ +G + + S T + LK Sbjct: 963 IADWLIDLGPGGGSAGGELIYAGPRPGIEQEPRSLTGQALK 1003 >UniRef50_B2RMJ8 Excinuclease ABC A subunit n=30 Tax=Bacteria RepID=B2RMJ8_PORG3 Length = 953 Score = 1055 bits (2728), Expect = 0.0, Method: Composition-based stats. Identities = 411/950 (43%), Positives = 569/950 (59%), Gaps = 31/950 (3%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 63 I ++GAR +NLKNI+L IPR KL+VVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ Sbjct: 16 IIIKGARVNNLKNISLTIPRGKLVVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 75 Query: 64 FLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCPDH 123 FL M KP+ D I G+ PAI+IEQ+ S NPRSTV T TEI++YLRLLFARVG P Sbjct: 76 FLGRMRKPECDLIAGVPPAIAIEQRVVSRNPRSTVATSTEIYEYLRLLFARVGRTISPRS 135 Query: 124 DVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARIDGEV 183 + TV+ +V V +P G +L LL + + + L+ QGY R + GE+ Sbjct: 136 GEEVKKHTVADLVAYVADRPIGSKLYLLVGLQAPQGRSLREHLQIQQQQGYTRIFVAGEM 195 Query: 184 CDLSDPPKLELQKKHTI--EVVVDRFKVRDD---LTQRLAESFETALELSGGTAVVADMD 238 + D E T +++DR + +D RLA+S ETA G ++ Sbjct: 196 KRIEDILSAETDFSDTASCFLLIDRLVIAEDKADYESRLADSAETAFFEGNGACLLRIES 255 Query: 239 -DPKAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQN 297 + EE +FS F G + +E P +FSFNNP GACPTC+G G D D V+ N Sbjct: 256 PEGTVEERMFSNVFE--ADGRTFQEPSPEMFSFNNPIGACPTCEGFGKVMGIDEDLVVPN 313 Query: 298 PELSLAGGAIRGWDR-RNFYYFQMLKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKENI 356 LS+ + W ++ + + F V P+ LS ++ G Sbjct: 314 KSLSVYEECVACWIGAKSQMWKDYFIQKSVPLGFPVHKPYKELSDTERDMLWRGVPTGEP 373 Query: 357 EFKYMNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGTRLRR 416 ++ + G+ ++ R L F C C G RL+ Sbjct: 374 DYPSI--------------GIDDYFSMLQRDMHKIQNRVRLTHFRGKATCPDCRGMRLKP 419 Query: 417 EARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNVGLN 476 +A V + + ++ +++ FF L+L+ I+ ++L+EIG RL FL+ VGL Sbjct: 420 DALCVRIGGRNISELTALTVEETSAFFEGLQLSEDDLHISRRLLEEIGKRLSFLLEVGLG 479 Query: 477 YLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRD 536 YLTL R + TLSGGE+QRI LA+Q+G+ LVG +YVLDEPSIGLHQRD RL+G L LRD Sbjct: 480 YLTLDRLSNTLSGGESQRISLATQLGSSLVGSLYVLDEPSIGLHQRDTHRLIGVLKRLRD 539 Query: 537 LGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKR 596 LGNTV+VVEHDE+ IR+AD++IDIGP AG GGEVV G + I T Y++G+ Sbjct: 540 LGNTVVVVEHDEETIRSADYIIDIGPKAGRQGGEVVYAGEYDRIDKDTPGYTAAYLTGRE 599 Query: 597 KIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFP 656 KIE+P+ R P N +++ A +NLK V + P+ + T +TGVSGSGKSTL+ D + Sbjct: 600 KIELPRLRRPWNS--YIEVREASKHNLKGVNVRFPLHVLTVVTGVSGSGKSTLVRDLFYE 657 Query: 657 IAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFA 716 +R L G + A + ++ + +DQ+ GR+ RSNP TY G + +R+L++ Sbjct: 658 GVKRILEGGSTQGLACEGIVGDIKSVRDIQYVDQNNFGRSTRSNPVTYIGAYDDIRKLYS 717 Query: 717 GVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETL 776 +P S+ GY P FSFN GGRCE C+G+G I VEM F+ DI + C++C GKR+ +E L Sbjct: 718 ALPLSKQMGYQPYFFSFNKEGGRCEVCKGEGSIVVEMQFMADIVLECEECHGKRFRKEIL 777 Query: 777 EIKYKGKTIHEVLDMTIEEAREFFDAVP------ALARKLQTLMDVGLTYIRLGQSATTL 830 +++Y G I+++L+MT+ +A EFF P + KL+ L +VGL Y++LGQS++TL Sbjct: 778 DVEYCGANIYDLLEMTVNQAVEFFTDHPKAGYTDKIVEKLECLREVGLGYLKLGQSSSTL 837 Query: 831 SGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEH 890 SGGE QRVKLA L + TL+I DEPTTGLH DI+ LL L L D+G+++VV+EH Sbjct: 838 SGGENQRVKLAAYLGQAKPAPTLFIFDEPTTGLHIHDIRTLLHALSALIDKGHSVVVVEH 897 Query: 891 NLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLKPML 940 N+++IK+AD I+DLGPEGG GG ++ +GTPE V C+ S+T ++LK +L Sbjct: 898 NMEMIKSADCIIDLGPEGGGAGGYLVATGTPEEVMRCDTSYTGKWLKEIL 947 Score = 101 bits (253), Expect = 1e-19, Method: Composition-based stats. Identities = 43/124 (34%), Positives = 66/124 (53%), Gaps = 6/124 (4%) Query: 601 PKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQR 660 + P + E ++ + GAR NNLK+++LT+P G +TG+SGSGKS+L DTL+ QR Sbjct: 4 QESEHPTSGEAIIIIKGARVNNLKNISLTIPRGKLVVVTGLSGSGKSSLAFDTLYAEGQR 63 Query: 661 QLNGATIAEPAPYR------DIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVREL 714 + + A + + + I I+Q + R PRS AT T ++ +R L Sbjct: 64 RYVESLSAYARQFLGRMRKPECDLIAGVPPAIAIEQRVVSRNPRSTVATSTEIYEYLRLL 123 Query: 715 FAGV 718 FA V Sbjct: 124 FARV 127 Score = 90.4 bits (223), Expect = 3e-16, Method: Composition-based stats. Identities = 39/113 (34%), Positives = 58/113 (51%), Gaps = 6/113 (5%) Query: 3 KIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYAR 62 IEVR A HNLK +N+ P L VVTG+SGSGKS+L D L+ EG +R +E S Sbjct: 613 YIEVREASKHNLKGVNVRFPLHVLTVVTGVSGSGKSTLVRD-LFYEGVKRILEGGSTQGL 671 Query: 63 QFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARV 115 + V I+ + ++Q + + RS T +D +R L++ + Sbjct: 672 ACEGI-----VGDIKSVRDIQYVDQNNFGRSTRSNPVTYIGAYDDIRKLYSAL 719 >UniRef50_Q6MRC9 Excinuclease ABC subunit A n=1 Tax=Bdellovibrio bacteriovorus RepID=Q6MRC9_BDEBA Length = 982 Score = 1051 bits (2718), Expect = 0.0, Method: Composition-based stats. Identities = 407/997 (40%), Positives = 582/997 (58%), Gaps = 78/997 (7%) Query: 1 MDKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAY 60 M I + G + +NLKNI + IP + V+ G SGSGKSSLAF+TL+AEGQRR++ES+S Y Sbjct: 1 MKDIHLWGVKQNNLKNIEVKIPVGSMTVICGPSGSGKSSLAFETLFAEGQRRFIESMSNY 60 Query: 61 ARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRC 120 ARQFL+ KPD++ I + PAISIEQK+T + RSTVGT TEI DYLRLL+ ++G+ C Sbjct: 61 ARQFLNKAPKPDIEGINNIPPAISIEQKNTVKSSRSTVGTTTEIIDYLRLLYEKIGKSYC 120 Query: 121 PDHDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERK-GEHTKTLENLASQGYIRARI 179 P H P ++V++ D VL GKR LL I E + E K L GY+R I Sbjct: 121 PTHHCPTEKESVTEATDKVLKNFAGKRGYLLVEINSEGRVAEGKKLHSLLLQDGYLRIYI 180 Query: 180 D----------------------------------------------GEVCDLSDPPKLE 193 G V ++ + ++ Sbjct: 181 PKVTEVKKPAAKAAGKKTKASGKKASKKVETPEIVATHPGGLTNEEMGTVVEIGEAAAIK 240 Query: 194 LQ-KKHTIEVVVDRFKVRDDLTQRLAESFETALELS--GGTAVV---ADMDDPKAEELLF 247 K T +V+DR +D RLA+S A E S T ++ A + E L Sbjct: 241 KGLPKETFYLVIDRMSFNEDERGRLADSLTQAYEASIKYNTHLITRRATILSTDGERLQV 300 Query: 248 SANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPELSLAGGAI 307 S +CP+CGY+ L +LFSFN+P GACPTC G G D ++VI NP LSLA GA+ Sbjct: 301 SEEASCPVCGYTPPPLSSKLFSFNSPIGACPTCKGFGNILDIDEEKVIPNPNLSLAQGAL 360 Query: 308 RG-WDRRNFYYFQMLKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKENIEFKYMNDRGD 366 W + + L + K D PW L V+ G+ Sbjct: 361 SPFWMPSAAHEKKQLLAYCKKTKIDTHTPWKDLPKAERDVIWNGNKD------------- 407 Query: 367 TSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGTRLRREARHVYVENT 426 F GV E + VR +++F S C +C+G RLR EA HV + N+ Sbjct: 408 -------FFGVRGLFEYLDQIKYKMHVRVFISRFRSPFQCPTCKGARLRTEANHVLIANS 460 Query: 427 PLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTLSRSAET 486 + +S+++I FF L++ + ++A ++LK+I RL+FL+ VG++YL+L R T Sbjct: 461 NINDLSNLTIEDLNTFFQKLEVTPFQQEVAGEVLKQIRSRLEFLMRVGVHYLSLGRETRT 520 Query: 487 LSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEH 546 LSGGE QR+ LA+Q+G GL +YVLDEP++GLH RDN+RL+ L L+DLGNT+++VEH Sbjct: 521 LSGGEYQRLILANQLGMGLSQALYVLDEPTVGLHPRDNDRLISILKDLKDLGNTLVIVEH 580 Query: 547 DEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEVPKKRVP 606 D D I+A++H+I++GPG+G GGEVV G E +S T ++ + + + P Sbjct: 581 DHDVIKASEHIIEMGPGSGYLGGEVVYSGTTEKFYDYEKSNTVPFLKPSKNWQALRTIRP 640 Query: 607 ANPEKV---LKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLN 663 + + ++L GA+G+NLK++ +T P+ +TGVSGSGKSTLI+ TL+P R L+ Sbjct: 641 VDVDNYKVKIELKGAKGHNLKNLDVTFPLNRLVTVTGVSGSGKSTLISKTLYPALARALD 700 Query: 664 GATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESRA 723 + Y + G+EH V+ IDQSPIG++ RS+P TY F +R + + PES++ Sbjct: 701 IEYMPAQ-DYSGLDGVEHIKNVLLIDQSPIGKSARSSPITYLKAFDAIRMIMSTTPESQS 759 Query: 724 RGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKYKGK 783 RGYT G FS NV GGRC AC+G G +++M F+ ++ +PCD C GK+Y E LEI+YK K Sbjct: 760 RGYTAGTFSLNVDGGRCPACKGTGYEEIDMMFMDNVVIPCDVCDGKKYRPEILEIQYKNK 819 Query: 784 TIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARE 843 IHE+L MT+ EA FF A P + + L L +VGL Y++LGQ A +LSGGE+QR+K+A+E Sbjct: 820 NIHEILSMTVNEAMNFFVAHPNIRKPLSVLKEVGLDYLQLGQPANSLSGGESQRLKIAKE 879 Query: 844 LSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADWIVD 903 LS+ TLYILDEPTTGLHF +++ L+ VL+KL + G ++VV+EHNLDVI+ +D+++D Sbjct: 880 LSQVQQKSTLYILDEPTTGLHFREVELLMKVLNKLIETGGSVVVVEHNLDVIRGSDYVID 939 Query: 904 LGPEGGSGGGEILVSGTPETVAECEASHTARFLKPML 940 LGPE G GG I+ +GTP+ + + + S T ++LK + Sbjct: 940 LGPEAGKKGGNIVATGTPDDIMKVKKSLTGQYLKRYI 976 >UniRef50_C2M987 Excinuclease ABC subunit A n=1 Tax=Porphyromonas uenonis 60-3 RepID=C2M987_9PORP Length = 959 Score = 1048 bits (2710), Expect = 0.0, Method: Composition-based stats. Identities = 410/952 (43%), Positives = 561/952 (58%), Gaps = 29/952 (3%) Query: 1 MDKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAY 60 ++ I +RG R +NLK I+L IPR +L+V+TG+SGSGKSSLAFDTLYAEGQRRYV+SLS+Y Sbjct: 20 LNDIIIRGCRVNNLKGIDLDIPRGELVVITGVSGSGKSSLAFDTLYAEGQRRYVDSLSSY 79 Query: 61 ARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRC 120 ARQFL M+KP+ D I+ L PA++IEQ+ S NPRSTVGT +EI DYLR+L ARVG+ Sbjct: 80 ARQFLMRMKKPECDQIKNLPPAVAIEQRVVSRNPRSTVGTSSEIDDYLRVLMARVGKLYS 139 Query: 121 PDHDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARID 180 P + T + +V+ P +L +LA + + L L QGY R ID Sbjct: 140 PISGELVKRHTAADVVEAAHQIPTDSKLYILADLYPPEGRRLIEHLMLLQGQGYNRVLID 199 Query: 181 GEVCDLSDPPKLELQKKHTIEVVVDRFKVR---DDLTQRLAESFETALELSGGTAVVADM 237 V + D EL++ ++++VDR VR D RL +S E AL T + Sbjct: 200 DTVYRIEDVSNKELREAKQVQLIVDRLTVRTGDDSYESRLGDSVEIALYEGRETCALRWQ 259 Query: 238 DDPKAEELLFSANFA--CPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVI 295 D A NF+ G + E P LF+FN+PAGAC C G G DP+RVI Sbjct: 260 DSEGAWSSEGRRNFSARFEADGRTFTEPTPDLFNFNSPAGACTVCGGFGSILGIDPERVI 319 Query: 296 QNPELSLAGGAIRGWDR-RNFYYFQMLKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKE 354 + LSL G + W ++ + + A + F + P+ L+ ++ Sbjct: 320 PDDSLSLYEGCVDCWRGAKSSEWAKAFIHEAKRFDFPIHTPYAELTQEQRDLL------- 372 Query: 355 NIEFKYMNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGTRL 414 + + G+ K+ R LA + C +C G RL Sbjct: 373 ------WHGHEGGGWGKGTLYGIDDYFAMLQKDIYKIQNRVRLAHYRGKSECYACHGGRL 426 Query: 415 RREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNVG 474 + +A I MSI A+ FF + AKIAE+ LKEI +RL+ L +VG Sbjct: 427 KEDALLFTYMGKNFHQIGQMSIREALTFFAQELEDPEEAKIAERPLKEIRNRLRTLDSVG 486 Query: 475 LNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHL 534 L YLTL R + TLSGGE+QRI LA+++G LVG MY+LDEPSIGLH RD +RL+ + L Sbjct: 487 LGYLTLDRRSNTLSGGESQRINLATRLGNSLVGSMYILDEPSIGLHDRDTDRLISVIKEL 546 Query: 535 RDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSG 594 RD GNTVIVVEHDE IRAAD++ID+G AG GGEV+ G I A T Y++G Sbjct: 547 RDQGNTVIVVEHDELTIRAADYLIDMGLDAGRLGGEVIYHGKPSDITAETPGYTAAYLTG 606 Query: 595 KRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTL 654 + +I VPK R P ++ L + NNLK + +P+ T +TGVSGSGKSTLI+D L Sbjct: 607 REEILVPKHRRPV--QRKLTMHHVHKNNLKGFDVDIPLFNMTVVTGVSGSGKSTLISDLL 664 Query: 655 FPIAQRQLNGATIAEPAPYRDIQG-LEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRE 713 QR +N R + G ++ ++V+ +DQ+ +GR+ RSNP TY FTP+RE Sbjct: 665 VEELQRIINAR--PRETQSRMLTGDVDLVEQVLYVDQNSVGRSTRSNPVTYIDAFTPIRE 722 Query: 714 LFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNR 773 L+A P ++ GY P FSFN GGRCE C+GDGV++V M F+ DI + CD C+GKR+ + Sbjct: 723 LYADQPLAKQMGYKPYFFSFNKEGGRCEVCKGDGVVEVPMQFMTDITLVCDACEGKRFQK 782 Query: 774 ETLEIKYKGKTIHEVLDMTIEEAREFFDAVPA-----LARKLQTLMDVGLTYIRLGQSAT 828 LE+ Y G I+++L+MT+++A EFF PA + R L+ L VGL Y++LGQ+++ Sbjct: 783 NILEVTYHGVNIYDLLEMTVDQAIEFFTKYPADQTTSIIRLLEGLQRVGLGYLQLGQNSS 842 Query: 829 TLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVI 888 TLSGGE QR+KLA L + TL++ DEPTTGLHF DI LL L DQG+++++I Sbjct: 843 TLSGGENQRLKLAYYLGRDHEPHTLFVFDEPTTGLHFHDISTLLAAFRDLIDQGHSVLII 902 Query: 889 EHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLKPML 940 EHN++VIK+AD+I+DLGP+GG GG+++V+GTPE VA C S T +LK L Sbjct: 903 EHNMEVIKSADYIIDLGPDGGDKGGQLVVAGTPEEVAACPDSITGHYLKEKL 954 Score = 178 bits (452), Expect = 1e-42, Method: Composition-based stats. Identities = 68/202 (33%), Positives = 109/202 (53%), Gaps = 12/202 (5%) Query: 399 KFISNRP--CASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIA 456 +F+++ C +CEG R ++ V + + +M++ A+EFF Sbjct: 763 QFMTDITLVCDACEGKRFQKNILEVTYHGVNIYDLLEMTVDQAIEFFTKYPADQT----- 817 Query: 457 EKILKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVG-VMYVLDEP 515 I L+ L VGL YL L +++ TLSGGE QR++LA +G ++V DEP Sbjct: 818 ----TSIIRLLEGLQRVGLGYLQLGQNSSTLSGGENQRLKLAYYLGRDHEPHTLFVFDEP 873 Query: 516 SIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEG 575 + GLH D LL L D G++V+++EH+ + I++AD++ID+GP G GG++V G Sbjct: 874 TTGLHFHDISTLLAAFRDLIDQGHSVLIIEHNMEVIKSADYIIDLGPDGGDKGGQLVVAG 933 Query: 576 PLEAIMAVPESLTGQYMSGKRK 597 E + A P+S+TG Y+ K Sbjct: 934 TPEEVAACPDSITGHYLKEKLT 955 Score = 93.1 bits (230), Expect = 5e-17, Method: Composition-based stats. Identities = 37/119 (31%), Positives = 58/119 (48%), Gaps = 6/119 (5%) Query: 606 PANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGA 665 +P + + G R NNLK + L +P G ITGVSGSGKS+L DTL+ QR+ + Sbjct: 16 KKSPLNDIIIRGCRVNNLKGIDLDIPRGELVVITGVSGSGKSSLAFDTLYAEGQRRYVDS 75 Query: 666 TIAEPAPYR------DIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGV 718 + + + +++ + I+Q + R PRS T + + +R L A V Sbjct: 76 LSSYARQFLMRMKKPECDQIKNLPPAVAIEQRVVSRNPRSTVGTSSEIDDYLRVLMARV 134 >UniRef50_C6VXN3 Excinuclease ABC, A subunit n=3 Tax=Bacteroidetes RepID=C6VXN3_DYAFD Length = 968 Score = 1026 bits (2652), Expect = 0.0, Method: Composition-based stats. Identities = 424/975 (43%), Positives = 586/975 (60%), Gaps = 65/975 (6%) Query: 3 KIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYAR 62 I ++GAR +NLKNI++ IPR+KL+V+TGLSGSGKSSLAFDTL+AEGQR YVESLS+YAR Sbjct: 22 YILIKGARVNNLKNIDVAIPRNKLVVITGLSGSGKSSLAFDTLFAEGQRMYVESLSSYAR 81 Query: 63 QFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCPD 122 QFL MEKP+V++I+G+SPAI+IEQK + NPRSTVGT TEI+DYL+LLFAR+G P Sbjct: 82 QFLGRMEKPEVEYIKGISPAIAIEQKVNTRNPRSTVGTSTEIYDYLKLLFARIGHTYSPV 141 Query: 123 HDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARIDGE 182 + +V+ +V+ +L+ EG R+M+LAP++ + L L S+GY R ++ E Sbjct: 142 SGEIVRKDSVTDVVNYMLAHDEGTRVMILAPLLIRDGRSQIEELTILLSKGYNRIVLNDE 201 Query: 183 VCDLSDP---PKLELQKKHTIEVVVDRFKVRDDLTQ---RLAESFETALELSGGTAVVAD 236 V + D P Q + + +++DR +R D RL++S +TA GT V Sbjct: 202 VVSIEDILENPDQFPQAGNRVFILIDRAAIRHDDEDTQYRLSDSVQTAFFEGEGTCTVHI 261 Query: 237 MDDPKAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQ 296 + E+ +FS F G + E LFSFNNP GAC C+G G DPD VI Sbjct: 262 V---GGEKRVFSDKFELD--GITFEEPTVNLFSFNNPFGACKRCEGFGKILGIDPDLVIP 316 Query: 297 NPELSLAGGAIRGWDRRNFYYFQM-LKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKEN 355 + LS+ GAI W + + L + F + P+ L+ +++ G Sbjct: 317 DKNLSVYDGAIAPWRTEKMGEWLVPLVRNGVKFDFPIHRPYKDLTPVQKELLWTG----- 371 Query: 356 IEFKYMNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGTRLR 415 F+G+ + +T R L++F C C G+RLR Sbjct: 372 ---------------NQYFQGINDFVSELESQTHKIQYRVMLSRFRGRTTCPDCRGSRLR 416 Query: 416 REARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNVGL 475 ++A +V + + + M I FF L+L +IA ++L EI RL ++ VGL Sbjct: 417 KDASYVKIGGKSITDLVLMPIQDVSVFFKQLELGDHDRQIARRVLTEIESRLDYMNRVGL 476 Query: 476 NYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLR 535 YLTL+R TLSGGE QRI+LA+ +G+ LVG MY+LDEPSIGLH RD +RL+G L LR Sbjct: 477 GYLTLNRLTSTLSGGEFQRIKLATSLGSALVGSMYILDEPSIGLHPRDTQRLVGVLESLR 536 Query: 536 DLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVP----------- 584 DLGNTVIVVEH+E+ + AAD +IDIGP AG GG VV +G I + Sbjct: 537 DLGNTVIVVEHEEEVMHAADQIIDIGPEAGTGGGHVVFQGNQSDIEELKINGSGAGNSQE 596 Query: 585 ---------------ESLTGQYMSGKRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLT 629 S T ++ G I VP R + L++ GAR NNLK++ + Sbjct: 597 GIGSQEVMSSGAGHMRSHTLDFLLGNDSIPVPSVRRKSL--HFLEIKGARENNLKELDVK 654 Query: 630 LPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAEPAPYRDIQG-LEHFDKVIDI 688 +P+ T +TGVSGSGKSTLI L+P R L G + + + G ++ + V I Sbjct: 655 IPLNNLTVVTGVSGSGKSTLIRKILYPALMR-LKGEFSEDVGRFDALTGSIDRIEAVEMI 713 Query: 689 DQSPIGRTPRSNPATYTGVFTPVRELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGV 748 DQ+PIG++ RSNP TY + +R++ + P S+ARGY P FSFNV GGRCE CQG+G Sbjct: 714 DQNPIGKSSRSNPVTYIKAYDYIRQMMSEQPLSKARGYKPSHFSFNVDGGRCEICQGEGE 773 Query: 749 IKVEMHFLPDIYVPCDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDA-VPALA 807 +KVEM F+ DIY+ C+ C GKR+ +E E++Y K I E+LDMT++EA +FF P LA Sbjct: 774 VKVEMQFMADIYLTCEGCNGKRFKQEIQEVRYHDKDIAEILDMTVDEAIDFFRETEPKLA 833 Query: 808 RKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGT--GQTLYILDEPTTGLHF 865 KL L +VGL Y+ LGQS+ TLSGGEAQRVKLA L K + G+TL+I DEPTTGLHF Sbjct: 834 DKLLPLQEVGLGYVGLGQSSNTLSGGEAQRVKLASFLGKGSSNKGKTLFIFDEPTTGLHF 893 Query: 866 ADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVA 925 DI++LL ++ L +QG+++++IEHN++VIK+ADWI+DLGPEGG GG + +GTPE + Sbjct: 894 HDIKKLLKAINALVEQGDSVIIIEHNMEVIKSADWIIDLGPEGGENGGNLTFTGTPEEML 953 Query: 926 ECEASHTARFLKPML 940 + + ++TA FLK + Sbjct: 954 KLDGNYTAEFLKEKI 968 Score = 93.1 bits (230), Expect = 4e-17, Method: Composition-based stats. Identities = 36/115 (31%), Positives = 58/115 (50%), Gaps = 10/115 (8%) Query: 1 MDKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAY 60 + +E++GAR +NLK +++ IP + L VVTG+SGSGKS+L LY R E Sbjct: 635 LHFLEIKGARENNLKELDVKIPLNNLTVVTGVSGSGKSTLIRKILYPALMRLKGE----- 689 Query: 61 ARQFLSLMEKPDV--DHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFA 113 F + + D I+ + I+Q + RS T + +DY+R + + Sbjct: 690 ---FSEDVGRFDALTGSIDRIEAVEMIDQNPIGKSSRSNPVTYIKAYDYIRQMMS 741 Score = 93.1 bits (230), Expect = 5e-17, Method: Composition-based stats. Identities = 37/119 (31%), Positives = 61/119 (51%), Gaps = 6/119 (5%) Query: 608 NPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATI 667 +P + + + GAR NNLK++ + +P ITG+SGSGKS+L DTLF QR + Sbjct: 18 DPRQYILIKGARVNNLKNIDVAIPRNKLVVITGLSGSGKSSLAFDTLFAEGQRMYVESLS 77 Query: 668 AEPAPYR------DIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPE 720 + + +++ ++ I I+Q R PRS T T ++ ++ LFA + Sbjct: 78 SYARQFLGRMEKPEVEYIKGISPAIAIEQKVNTRNPRSTVGTSTEIYDYLKLLFARIGH 136 >UniRef50_C7I293 Excinuclease ABC, A subunit n=1 Tax=Thiomonas intermedia K12 RepID=C7I293_THIIN Length = 1979 Score = 1022 bits (2643), Expect = 0.0, Method: Composition-based stats. Identities = 389/998 (38%), Positives = 545/998 (54%), Gaps = 89/998 (8%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 63 I + GAR +NLKN++L IP +++VVTG+SGSGKSSL FDT+YAEGQRRYVE+ S YARQ Sbjct: 19 IRIIGARQNNLKNLDLDIPLGRIVVVTGVSGSGKSSLVFDTVYAEGQRRYVETFSPYARQ 78 Query: 64 FLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCPDH 123 FL M++P VD IEG+ PAI+I+Q + RSTVGT+TE+ D+L+LLFAR C Sbjct: 79 FLDRMDRPQVDRIEGIPPAIAIDQTNPVRTSRSTVGTMTELADHLKLLFARAARLYCRGC 138 Query: 124 DVPLAAQTVSQMVDNVLS----QPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARI 179 + T +V++V P+G R ++ + + + LA+QGY R Sbjct: 139 GAEVRRDTAQSIVEDVQRRARLLPQGLRAAVVFAVAMPQGMSVEHITQQLAAQGYTRIL- 197 Query: 180 DGEVCDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVADM-- 237 GE + K ++VV DR ++ D RL+E+ E AL L G V ++ Sbjct: 198 -GER---------DTPKGRVLDVVQDRLRLPTDEPARLSEAVEAALRLGQGRMEVHELPR 247 Query: 238 ----DDPKAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDR 293 + K +S++ C C R+ P LFSFN+P GAC TC G G D D Sbjct: 248 DAEAAESKGMVWRYSSDLHCADCDIHYRDPSPGLFSFNSPVGACETCRGFGRVIGVDLDL 307 Query: 294 VIQNPELSLAGGAIRGWDRRNFYYFQ-MLKSLADHYKFDVEAPWGSLSANVHKVVLYGSG 352 VI + +L GA++ W ++F Q L+ A + ++ PW LS + V+ G Sbjct: 308 VIPDVRKTLRAGAVKPWQTQSFAECQTDLERYAAQAEIRLDVPWAELSESERTWVIEGDP 367 Query: 353 KENIEFKYMNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGT 412 ++ F GV + VR L+K+ S C +C+G Sbjct: 368 DWRGNWQ------------KQFYGVRRYFDWLESRAYKMHVRVLLSKYRSYTACPTCQGA 415 Query: 413 RLRREARHVYVE--------------------------------NTPLPAISDMSIGHAM 440 RL+ EA + L ++ + I Sbjct: 416 RLKTEALLWRIGSKFQADTALQGGYRRFRPVGAQWSDAVLGGLPGLNLHDVNSLPIERLQ 475 Query: 441 EFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQ 500 F +L L + +L I RL++L +VGL YLTL R + TLSGGE QRI L + Sbjct: 476 RLFADLALPDMAQAASSMLLDNIRSRLRYLRDVGLGYLTLDRQSRTLSGGEVQRINLTTA 535 Query: 501 IGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDI 560 +G L ++VLDEPSIGLH RD +RL G L L++ GN++++VEHD +R AD +++I Sbjct: 536 LGTALTQTLFVLDEPSIGLHPRDLDRLGGVLHRLKEAGNSLLLVEHDPQLMRTADWMLEI 595 Query: 561 GPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIE--VPKKRVPANP------EKV 612 GPG G GG +V +G L+ +LTG+Y+SG+ ++ +P++R P Sbjct: 596 GPGPGERGGHLVFQGTLDQ-AQRSNTLTGRYLSGELQVSDALPRRRTPRRDAQGGLLAPR 654 Query: 613 LKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAEPAP 672 L L GAR +NLK +T+ +P+G T +TGVSG GKSTL+ D L+P R L G T P Sbjct: 655 LILEGAREHNLKSLTVEIPLGFMTALTGVSGCGKSTLVGDVLYPALARAL-GKTAPVPGA 713 Query: 673 YRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESRARGYTPGRFS 732 + + G + V+ +DQSPIG+T RSNP ++ G F +R LFA +P +R RGYT G FS Sbjct: 714 FDRLLGADQVGDVVLVDQSPIGKTARSNPVSFVGAFDGIRALFAALPAARERGYTAGTFS 773 Query: 733 FNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIK------YKGKTIH 786 FN GRC C G G VEM FL D+Y+ C C GKRY E LE++ + + Sbjct: 774 FNSGEGRCPTCGGSGFEHVEMQFLSDVYLRCPDCDGKRYRAEVLEVQLPAQAGFAPLNMA 833 Query: 787 EVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSK 846 +VLD+T+ EA + F + R LQ L+DVGL Y+RLGQ TLSGGEAQR+KLA L+ Sbjct: 834 QVLDLTVAEALQRFRGQADITRTLQALVDVGLDYLRLGQPTPTLSGGEAQRLKLAGFLAD 893 Query: 847 RGTGQ-------TLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTAD 899 + TL++ DEPTTGLHF D+ +LL L KL D G+T++VIEHNLDVI ++D Sbjct: 894 AAKTRAGLARKGTLFLFDEPTTGLHFDDVAKLLRALRKLLDAGHTVLVIEHNLDVIASSD 953 Query: 900 WIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLK 937 W++DLGPEGG GG ++ +G P+ +A C S T + L Sbjct: 954 WVIDLGPEGGDAGGRLVFAGPPDELAACATSFTGQALA 991 Score = 853 bits (2205), Expect = 0.0, Method: Composition-based stats. Identities = 371/937 (39%), Positives = 524/937 (55%), Gaps = 67/937 (7%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 63 I +R AR HNL+ +++ IPR ++ V+TG+SGSGKS+LAFD L+ EGQRRY+ES++AYARQ Sbjct: 1089 IAIRQAREHNLRGVDVDIPRGEMTVITGVSGSGKSTLAFDVLFTEGQRRYLESINAYARQ 1148 Query: 64 FLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCPDH 123 F+ +PDV+ I G+ P ++IEQ+++ +STVGT+TE + +LRL++A+ G CPD Sbjct: 1149 FVQPAARPDVEAIVGIPPTVAIEQRTSRGGRKSTVGTLTEAYHFLRLIYAKCGTQYCPDC 1208 Query: 124 DVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARIDGEV 183 ++P+ Q+ + +L G+ + LLAP++ +RKG +T S GY R+DG Sbjct: 1209 NIPIEPQSPEAIAAQLLRDWRGQHIGLLAPLVVQRKGYYTDLAVWARSMGYTHLRVDGAF 1268 Query: 184 CDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVADMDDPKAE 243 P+L+ K+H+IE+ V VR D + L + AL L G +V D E Sbjct: 1269 VPTDPWPRLDRFKEHSIELPVGDVVVRADNEEALRDLLRRALALGKGVVLVLAPLDGLKE 1328 Query: 244 ELLFSANFACPICGYSMRELEPRLFSFN-NPAGACPTCDGLGV-QQYFDPDRVIQNPELS 301 + EP + S + ACP C G + DP + Sbjct: 1329 A-------------MEAGQPEPPMRSLLLSTKRACPGC---GRSFRELDPRQF------- 1365 Query: 302 LAGGAIRGWDRRNFYYFQMLKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKENIEFKYM 361 ++ + + FD E +G+E + Sbjct: 1366 -------SYNSPTGWCPTCFGTGELIAGFDAEQ----------------TGEEAAWVEAD 1402 Query: 362 NDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGTRLRREARHV 421 ++ + E T C SC G RL R++ V Sbjct: 1403 GEKATPRGKPGRDRKAAPVAEPGAPST-----------------CPSCHGARLNRDSLAV 1445 Query: 422 YVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTLS 481 + + + ++ I A +F L L + A+I L EI RL F+ VGL YL L Sbjct: 1446 RLRDQSIAQLAARDIDAAAAWFGALALTPREAEIVRDALSEIRSRLAFMQQVGLGYLGLD 1505 Query: 482 RSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTV 541 R A TLSGGEAQRIRLA+Q+G+ L GV YVLDEP+IGLH RDN LL L L+ GNT+ Sbjct: 1506 RGAPTLSGGEAQRIRLAAQLGSNLRGVCYVLDEPTIGLHPRDNRILLDALALLKAKGNTL 1565 Query: 542 IVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEVP 601 +VVEHDED +R ADH+IDIGPGAG GG+VVA G L +MA ++ T + + + Sbjct: 1566 VVVEHDEDTMRRADHLIDIGPGAGRRGGQVVASGALAEVMAHADTATARSLRDPMPWPLQ 1625 Query: 602 KKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQ 661 + + + L L A +NL+ ++ P G T +TGVSGSGKSTL + L P ++ Sbjct: 1626 PRPLTRADQPALHLHSAHLHNLQGLSAQFPRGRLTVVTGVSGSGKSTLAREVLVPALHQR 1685 Query: 662 LNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPES 721 L G D+ G E ++V+++DQ+PIG+TPRS ATY G++ +R+LFA E+ Sbjct: 1686 LAGHAGEIDGA-GDLTGWEGLERVLEVDQAPIGKTPRSCAATYLGLWDGIRQLFADTEEA 1744 Query: 722 RARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKYK 781 R RGYT RFSFN GRC C+G G +KV M+FLPD+ VPC C G R+N ETL ++ + Sbjct: 1745 RIRGYTASRFSFNTGPGRCPTCEGQGAVKVAMNFLPDVTVPCTDCNGLRFNPETLAVRLR 1804 Query: 782 GKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLA 841 G+ EVL M ++EA EFF A + LQ L DVGL Y++LGQ + LSGGEAQR+KL Sbjct: 1805 GRNAGEVLQMEVDEAVEFFAAHRKIHHALQLLQDVGLGYLQLGQPSPFLSGGEAQRIKLV 1864 Query: 842 RELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADWI 901 EL+ GT T+Y+LDEPT GLH D ++L+ VLH+L D G+T+VVIEH+LD++ ADW+ Sbjct: 1865 TELATAGTRPTVYVLDEPTVGLHKTDTEKLIRVLHRLTDSGHTVVVIEHDLDMMANADWL 1924 Query: 902 VDLGPEGGSGGGEILVSGTPETVAECEAS-HTARFLK 937 +DLGPEGG GGG +++ G E +A HTA+ L+ Sbjct: 1925 IDLGPEGGKGGGRLVMQGPTADFLEADAPGHTAKALR 1961 Score = 163 bits (414), Expect = 2e-38, Method: Composition-based stats. Identities = 78/283 (27%), Positives = 120/283 (42%), Gaps = 43/283 (15%) Query: 353 KENIEFKYMNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFIS---------- 402 + +E + G+ + + + +TE + +R A S Sbjct: 1706 ERVLEVDQAPIGKTPRSCAATYLGLWDGIRQLFADTEEARIRGYTASRFSFNTGPGRCPT 1765 Query: 403 -----------------NRPCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNN 445 PC C G R E V + + M + A+EFF Sbjct: 1766 CEGQGAVKVAMNFLPDVTVPCTDCNGLRFNPETLAVRLRGRNAGEVLQMEVDEAVEFF-- 1823 Query: 446 LKLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIG-AG 504 ++I L+ L +VGL YL L + + LSGGEAQRI+L +++ AG Sbjct: 1824 ------------AAHRKIHHALQLLQDVGLGYLQLGQPSPFLSGGEAQRIKLVTELATAG 1871 Query: 505 LVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGA 564 +YVLDEP++GLH+ D E+L+ L L D G+TV+V+EHD D + AD +ID+GP Sbjct: 1872 TRPTVYVLDEPTVGLHKTDTEKLIRVLHRLTDSGHTVVVIEHDLDMMANADWLIDLGPEG 1931 Query: 565 GVHGGEVVAEGPLEAIMAVPES-LTGQYMSGKRKIEVPKKRVP 606 G GG +V +GP + T + + + RV Sbjct: 1932 GKGGGRLVMQGPTADFLEADAPGHTAKALRDAWTQHQAQYRVA 1974 Score = 88.1 bits (217), Expect = 2e-15, Method: Composition-based stats. Identities = 36/117 (30%), Positives = 54/117 (46%), Gaps = 6/117 (5%) Query: 607 ANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQL---- 662 A + + AR +NL+ V + +P G T ITGVSGSGKSTL D LF QR+ Sbjct: 1083 AGKAGFIAIRQAREHNLRGVDVDIPRGEMTVITGVSGSGKSTLAFDVLFTEGQRRYLESI 1142 Query: 663 --NGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAG 717 +PA D++ + + I+Q +S T T + +R ++A Sbjct: 1143 NAYARQFVQPAARPDVEAIVGIPPTVAIEQRTSRGGRKSTVGTLTEAYHFLRLIYAK 1199 Score = 86.9 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 37/141 (26%), Positives = 58/141 (41%), Gaps = 28/141 (19%) Query: 3 KIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVES--LSAY 60 ++ + GAR HNLK++ + IP + +TG+SG GKS+L D LY R ++ + Sbjct: 654 RLILEGAREHNLKSLTVEIPLGFMTALTGVSGCGKSTLVGDVLYPALARALGKTAPVPGA 713 Query: 61 ARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARV----- 115 + L + DV + ++Q RS + D +R LFA + Sbjct: 714 FDRLLGADQVGDV---------VLVDQSPIGKTARSNPVSFVGAFDGIRALFAALPAARE 764 Query: 116 ------------GEPRCPDHD 124 GE RCP Sbjct: 765 RGYTAGTFSFNSGEGRCPTCG 785 >UniRef50_D2QFW0 Excinuclease ABC, A subunit n=2 Tax=Bacteroidetes RepID=D2QFW0_9SPHI Length = 997 Score = 1021 bits (2640), Expect = 0.0, Method: Composition-based stats. Identities = 428/1002 (42%), Positives = 578/1002 (57%), Gaps = 97/1002 (9%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 63 I ++GA+ HNLK I++ IPR+KL+V+TGLSGSGKSSLAFDTL+AEGQR YVESLS+YARQ Sbjct: 22 IIIKGAKVHNLKGIDVAIPRNKLVVLTGLSGSGKSSLAFDTLFAEGQRMYVESLSSYARQ 81 Query: 64 FLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCPDH 123 FL MEKP+V++I+G+SPAI+IEQK ++ NPRSTVGT TEI+DYL+LLFAR G P Sbjct: 82 FLGRMEKPEVEYIKGVSPAIAIEQKVSTRNPRSTVGTSTEIYDYLKLLFARSGVTYSPIS 141 Query: 124 DVPLAAQTVSQMVDNVLSQPEG-----KRLMLLAPIIKERKGEHTKTLENLASQGYIRAR 178 + TV+ +V+ + G +R+M++AP+ L L +GY R Sbjct: 142 GHEVKKDTVTDVVNFMYGYEAGPGGAPQRVMIMAPLRIREGRTLAYELNILLQKGYTRIV 201 Query: 179 IDG----------EVCDLSDPPKLELQKKH------TIEVVVDRFKV--------RDDLT 214 DG +V + D + E ++E++VDR V +D Sbjct: 202 ADGGQDDAASSARQVLQIEDILENEGNYASLFADHASLEILVDRGTVLYDANGNPDEDNQ 261 Query: 215 QRLAESFETALELSGGTAVVADMDDPKAEELLFSANFACPICGYSMRELEPRLFSFNNPA 274 R ++S +TA GT V D E +FS F G + E LF+FNNP Sbjct: 262 YRFSDSVQTAFSEGEGTCRV---DVVGKESRVFSDKFELD--GIAFEEPSVNLFTFNNPY 316 Query: 275 GACPTCDGLGVQQYFDPDRVIQNPELSLAGGAIRGWDRRNFYYFQMLKSLAD---HYKFD 331 GAC CDG G DPD V+ + LS+ GAI W R + LK L + F Sbjct: 317 GACRRCDGFGKVLGIDPDLVVPDKNLSVFEGAIAPW-RSEKMSEEFLKPLLKNGIRFDFP 375 Query: 332 VEAPWGSLSANVHKVVLYGSGKENIEFKYMNDRGDTSIRRHPFEGVLHNMERRYKETESS 391 + P+ L+ +++ G F+G+ +T Sbjct: 376 IHRPYKDLTPAEQELLWTG--------------------NKYFDGINAFFAFVESQTFKV 415 Query: 392 AVREELAKFISNRPCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQ 451 R L+++ C C G+RLR++A +V V + + M + H FF +L+L Sbjct: 416 QYRVMLSRYRGKTTCPECRGSRLRKDAGYVKVGGKSITDLVLMPLTHVTAFFQDLELPAH 475 Query: 452 RAKIAEKILKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYV 511 + ++A +IL EI +RL F+ VGL YLTL+R TLSGGE QRI+LA+ +G+ LVG MY+ Sbjct: 476 QQQVANRILIEIRNRLDFMERVGLGYLTLNRLTNTLSGGEYQRIKLATSLGSALVGSMYI 535 Query: 512 LDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEV 571 LDEPSIGLH RD +RL+ L LRD+GNTVIVVEH+E+ +RAAD +IDIGP AG GG + Sbjct: 536 LDEPSIGLHPRDTQRLVSVLEALRDMGNTVIVVEHEEEVMRAADQLIDIGPDAGSLGGHL 595 Query: 572 VAEGPLEAIMA-------------------------------VPESLTGQYMSGKRKIEV 600 + +G I S T +++G+ + V Sbjct: 596 MFQGTWGDIKELGARSEERGVADASGSLHASATPHSSLLAPHSSSSHTIDFLTGRETVPV 655 Query: 601 PKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQR 660 P R A ++L GAR NNLKDV + P+ T +TGVSGSGKSTLI L+P R Sbjct: 656 PTFRRKATN--FIELKGARENNLKDVDVRFPLNTLTVVTGVSGSGKSTLIRKVLYPALMR 713 Query: 661 QLNGATIAEPAPYRDIQG-LEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVP 719 Q G E + + G LE V IDQ+PIG++ RSNP TY + +R++ A P Sbjct: 714 Q-RGEGTEEAGRFDSLSGSLERISSVEMIDQNPIGKSSRSNPVTYIKAYDYLRQVMADQP 772 Query: 720 ESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIK 779 S++RGY P FSFNV GGRCE CQG+G +K+EM F+ DIY+ C+ C GKR+ +E LE+ Sbjct: 773 VSKSRGYKPSHFSFNVDGGRCEVCQGEGEVKIEMQFMADIYLKCEGCGGKRFKQEVLEVT 832 Query: 780 YKGKTIHEVLDMTIEEAREFFDAVP-ALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRV 838 K I ++LDMT++EA FF V +A KLQ L DVGL YI LGQSA TLSGGEAQRV Sbjct: 833 LHDKNISDILDMTVDEAIVFFRKVDNKMADKLQPLQDVGLGYIGLGQSANTLSGGEAQRV 892 Query: 839 KLARELSK--RGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIK 896 KLA L K G L+I DEPTTGLHF DI++LL ++ L DQG+++++IEHN++VIK Sbjct: 893 KLASFLGKGNPNKGSMLFIFDEPTTGLHFHDIRKLLAAINALVDQGDSVIIIEHNMEVIK 952 Query: 897 TADWIVDLGPEGGSGGGEILVSGTPETVAE-CEASHTARFLK 937 AD I+D+GPEGG GG I+ +GTPE + + + +HTAR+LK Sbjct: 953 NADHIIDIGPEGGETGGYIMFTGTPEEMVKLDDGNHTARYLK 994 Score = 96.5 bits (239), Expect = 5e-18, Method: Composition-based stats. Identities = 38/112 (33%), Positives = 58/112 (51%), Gaps = 6/112 (5%) Query: 2 DKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYA 61 + IE++GAR +NLK++++ P + L VVTG+SGSGKS+L LY R+ E Sbjct: 664 NFIELKGARENNLKDVDVRFPLNTLTVVTGVSGSGKSTLIRKVLYPALMRQRGEGTEEAG 723 Query: 62 RQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFA 113 R + +E +S I+Q + RS T + +DYLR + A Sbjct: 724 R--FDSLS----GSLERISSVEMIDQNPIGKSSRSNPVTYIKAYDYLRQVMA 769 Score = 90.4 bits (223), Expect = 3e-16, Method: Composition-based stats. Identities = 34/116 (29%), Positives = 60/116 (51%), Gaps = 6/116 (5%) Query: 608 NPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATI 667 +P++ + + GA+ +NLK + + +P +TG+SGSGKS+L DTLF QR + Sbjct: 17 DPKQFIIIKGAKVHNLKGIDVAIPRNKLVVLTGLSGSGKSSLAFDTLFAEGQRMYVESLS 76 Query: 668 AEPAPYR------DIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAG 717 + + +++ ++ I I+Q R PRS T T ++ ++ LFA Sbjct: 77 SYARQFLGRMEKPEVEYIKGVSPAIAIEQKVSTRNPRSTVGTSTEIYDYLKLLFAR 132 >UniRef50_A4BKX6 Excinuclease ABC, A subunit n=4 Tax=Proteobacteria RepID=A4BKX6_9GAMM Length = 1868 Score = 1019 bits (2636), Expect = 0.0, Method: Composition-based stats. Identities = 387/985 (39%), Positives = 536/985 (54%), Gaps = 80/985 (8%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 63 I +RGAR +NL+N++L IP +L+V+TG+SGSGKSSLAFDT+YAEGQRRYVE+ S YARQ Sbjct: 10 ISIRGARQNNLRNLDLDIPLGELVVITGVSGSGKSSLAFDTVYAEGQRRYVETFSPYARQ 69 Query: 64 FLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCPDH 123 FL M+KP + I+G+ PAI+I+Q + + RSTVGT+TE++D+L+LLFAR C Sbjct: 70 FLDRMDKPAAERIDGIPPAIAIDQTNPVRSSRSTVGTMTELNDHLKLLFARAARLYCQRC 129 Query: 124 DVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARIDGEV 183 + T + + ++++ EG+R ++ + + L QGY R Sbjct: 130 GHRVVRDTADGIFEQLIARGEGQRAIITFAVEVPANFTPEEIRALLGRQGYTR------- 182 Query: 184 CDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVADMDDPKAE 243 L IEV DR ++ + R+ E+ E AL+ G V +D+ + Sbjct: 183 --------LHSTDNQRIEVSQDRLRLAANHRNRIVEALEAALKHGLGRTSVYPLDEHRQP 234 Query: 244 E--LLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPELS 301 + FS + C C + P FSFN+P GAC C G G D VI + LS Sbjct: 235 QAPWRFSTDLHCADCDLHYTDPHPSFFSFNSPIGACTVCRGFGRTLGIDYAAVIPDERLS 294 Query: 302 LAGGAIRGWDRRNFYYFQM-LKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKENIEFKY 360 LA GAIR W Q L A H + PW +L+ + + VL G G Sbjct: 295 LAAGAIRPWRSGQSAECQRDLLRFARHRDLPTDTPWCNLTESDRRWVLDGEGDGA----- 349 Query: 361 MNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGTRLRREARH 420 + GV + ++ VR L+K+ S C++C G RL+ + Sbjct: 350 -----------DRWYGVRGYFDWLESKSYKMHVRVLLSKYRSYDLCSACHGARLKPQTLL 398 Query: 421 VYVE-------------------------------NTPLPAISDMSIGHAMEFFNNLKLA 449 + + + + + A+ FF L+L Sbjct: 399 WRLGRRKDADAVLDPAARFYPAGAALPRERLTKLPGLSIHDLMRLPLERAVHFFQLLQLP 458 Query: 450 GQRAKIAEKILKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVM 509 + AE +L+ I RL++L VGL YLTL R + TLSGGE QRI L + +G LV + Sbjct: 459 APMDEAAEVLLEGIRTRLRYLGEVGLGYLTLDRQSRTLSGGEVQRINLTTALGTSLVNTL 518 Query: 510 YVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGG 569 +VLDEPSIGLH RD +R++ + LRD GNT++VVEHD +RAAD ++D+GPG G GG Sbjct: 519 FVLDEPSIGLHPRDMQRIIEVMQRLRDAGNTLLVVEHDPQVMRAADRILDLGPGPGERGG 578 Query: 570 EVVAEGPLEAIMAVPESLTGQYMSGKRKIEVPKKRVPA-NPEKVLKLTGARGNNLKDVTL 628 ++V GP ++ SLT Y+SG+R I + P +P L++ GA +NLK++ + Sbjct: 579 DIVFCGPPAELLQARGSLTADYLSGRRTIGSAEIERPRGSPSLWLEIDGAAAHNLKNLDV 638 Query: 629 TLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDI 688 LP+ +TGVSGSGKSTL+ L+ R+L G P + + G E D+V+ + Sbjct: 639 RLPLQRLAVLTGVSGSGKSTLLQSVLYNAL-RKLQGRPAERPGQFTALHGHEQLDEVVLV 697 Query: 689 DQSPIGRTPRSNPATYTGVFTPVRELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGV 748 DQSPIG+T RSNPA+Y G FT +R+ FA P +R RGY PG FSFN GRC +C G+G Sbjct: 698 DQSPIGKTTRSNPASYVGAFTAIRKAFAAEPLARERGYQPGTFSFNSGSGRCPSCGGNGF 757 Query: 749 IKVEMHFLPDIYVPCDQCKGKRYNRETLEIKYK--------GKTIHEVLDMTIEEAREFF 800 VEM FL D+Y+ C C G+RY E LE+K K++ +VL MT+ +A FF Sbjct: 758 EHVEMQFLSDVYLRCPDCDGRRYRAEVLEVKLAPSADCRTTPKSVADVLAMTVTQASAFF 817 Query: 801 DAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLAREL---SKRGTGQT--LYI 855 P + L L VGL Y++LGQ TLSGGEAQR+KLA L ++R L++ Sbjct: 818 ADYPDIVAALTPLEAVGLGYLQLGQPVPTLSGGEAQRLKLAGHLTGAARRQAQHKRLLFL 877 Query: 856 LDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEI 915 DEPTTGLHF DI LL +L G++++VIEHNLDVI ADWI+DLGPEGG GGEI Sbjct: 878 FDEPTTGLHFEDIATLLHAFERLLQAGHSLLVIEHNLDVIAAADWIIDLGPEGGERGGEI 937 Query: 916 LVSGTPETVAECEASHTARFLKPML 940 + SG+P V ASHT + L L Sbjct: 938 VCSGSPAQVMAVAASHTGQALAAYL 962 Score = 604 bits (1558), Expect = e-171, Method: Composition-based stats. Identities = 270/549 (49%), Positives = 364/549 (66%), Gaps = 12/549 (2%) Query: 404 RPCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEI 463 PC +C+G RL EA + + + + +S+ A F++L+L G+ A IA +L E+ Sbjct: 1297 HPCPACQGRRLCPEALAIRFQGRNIADYTALSVEAAAHIFDSLELTGREAAIARDLLPEL 1356 Query: 464 GDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRD 523 RL FL VGL+YLTL R+A TLSGGEAQRIRLA+Q+G+ L G YVLDEP+IGLH RD Sbjct: 1357 CHRLAFLKEVGLSYLTLDRAAPTLSGGEAQRIRLAAQLGSSLHGACYVLDEPTIGLHPRD 1416 Query: 524 NERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAV 583 N LL +L LR GNT++VVEHDE+ IR A+HVID+GP AG GG VVA G + Sbjct: 1417 NRMLLDSLRRLRAKGNTIVVVEHDEETIRCAEHVIDLGPAAGAAGGHVVATGTPLQLAQS 1476 Query: 584 PESLTGQYMSGKRKIE-VPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVS 642 +SLTG+ ++ + + ++R P P++V++L GA +NL + ++LP+G ++GVS Sbjct: 1477 ADSLTGRLLAEPLRHPLLARRRRPQTPDRVIRLVGANRHNLHGIDVSLPLGRLVGVSGVS 1536 Query: 643 GSGKSTLINDTLFPIAQRQLNGATIAEPAP---YRDIQGLEHFDKVIDIDQSPIGRTPRS 699 GSGKSTL+ L+ +R + AP +D+ G E D+V+++DQSPIG+TPRS Sbjct: 1537 GSGKSTLVRTVLYANLRRLVAAKRSRSRAPLRDCKDLIGWESIDRVLEVDQSPIGKTPRS 1596 Query: 700 NPATYTGVFTPVRELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDI 759 PATY G + VR LFA E+R RGY PGRFSFN + GRC AC+G G+ +V M FLPD+ Sbjct: 1597 CPATYVGFWDDVRRLFAQTEEARVRGYGPGRFSFNTKDGRCPACEGQGLQRVAMSFLPDV 1656 Query: 760 YVPCDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLT 819 + CD C G R+ ETL ++Y+G++I VL +++ EA EFF + L+ L D GL Sbjct: 1657 TLRCDLCNGLRFTPETLAVEYRGQSIGAVLQLSVAEAAEFFGVHRKIQHALRLLQDTGLG 1716 Query: 820 YIRLGQSATTLSGGEAQRVKLARELSKRGTG-------QTLYILDEPTTGLHFADIQQLL 872 Y+ LGQ + TLSGGEAQR+KL EL+K G TLY+LDEPT GLH AD+++L+ Sbjct: 1717 YLALGQPSPTLSGGEAQRLKLVTELAKARPGERRGRSPHTLYLLDEPTVGLHMADVEKLI 1776 Query: 873 DVLHKLRDQGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAE-CEASH 931 VLH+L GNT+VVIEHNLD++ DW++DLGPEGG GGG I+ G PETVA+ E S+ Sbjct: 1777 RVLHRLVAAGNTVVVIEHNLDMLAEVDWLIDLGPEGGQGGGRIVAEGAPETVAQVSEGSY 1836 Query: 932 TARFLKPML 940 TAR L L Sbjct: 1837 TARLLDEFL 1845 Score = 336 bits (863), Expect = 2e-90, Method: Composition-based stats. Identities = 125/286 (43%), Positives = 183/286 (63%), Gaps = 3/286 (1%) Query: 2 DKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYA 61 + I + AR HNLKNI++ +PRD+L V+TG+SGSGKS+LAFD LY EGQRRY+ESL+AYA Sbjct: 991 ESIYIHHAREHNLKNIDVHVPRDRLTVITGISGSGKSTLAFDILYNEGQRRYLESLNAYA 1050 Query: 62 RQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCP 121 RQF+ +P+VD I G+ P ++IEQ+++ +STV T TE++ +LRLLF ++G CP Sbjct: 1051 RQFVQPAARPEVDAIFGIPPTVAIEQRTSRGGRKSTVATQTELYHFLRLLFVKLGVQHCP 1110 Query: 122 DHDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARIDG 181 D D+P+ AQTV +V +L G+ +LAP++ RKG +T+ + A +G+ + R+D Sbjct: 1111 DCDLPIEAQTVDAIVARLLRAHRGRPAHVLAPLVTARKGYYTELAKWAAGKGFTQLRVDR 1170 Query: 182 EVCDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVADMDDPK 241 + ++ P+L+ ++H I++ V + + RL + ALEL G V D K Sbjct: 1171 VLLPTANWPRLDRYREHDIDLPVAELMLEPENEARLRAQLQWALELGKGRVKV---DFGK 1227 Query: 242 AEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQ 287 E LFS ACP CG S +E +PR SFN+ G CP+C G+GV Sbjct: 1228 PGEALFSIQRACPNCGRSFQEADPRRLSFNSKHGWCPSCYGVGVVL 1273 Score = 215 bits (547), Expect = 7e-54, Method: Composition-based stats. Identities = 104/350 (29%), Positives = 156/350 (44%), Gaps = 48/350 (13%) Query: 403 NRPCASCEGTRLRREARHVYVEN--------TPLPAISDMSIGHAMEFFNNLKLAGQRAK 454 C C+G R R E V + + + M++ A FF + Sbjct: 769 YLRCPDCDGRRYRAEVLEVKLAPSADCRTTPKSVADVLAMTVTQASAFFADYP------- 821 Query: 455 IAEKILKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIG------AGLVGV 508 +I L L VGL YL L + TLSGGEAQR++LA + A + Sbjct: 822 -------DIVAALTPLEAVGLGYLQLGQPVPTLSGGEAQRLKLAGHLTGAARRQAQHKRL 874 Query: 509 MYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHG 568 +++ DEP+ GLH D LL L G++++V+EH+ D I AAD +ID+GP G G Sbjct: 875 LFLFDEPTTGLHFEDIATLLHAFERLLQAGHSLLVIEHNLDVIAAADWIIDLGPEGGERG 934 Query: 569 GEVVAEGPLEAIMAVPESLTGQ----YMSGKRKIEVPKKRVPANPE----------KVLK 614 GE+V G +MAV S TGQ Y+ + + A P + + Sbjct: 935 GEIVCSGSPAQVMAVAASHTGQALAAYLKARATKPLSSNSATAEPGAAVPAAQHGAESIY 994 Query: 615 LTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQL------NGATIA 668 + AR +NLK++ + +P T ITG+SGSGKSTL D L+ QR+ Sbjct: 995 IHHAREHNLKNIDVHVPRDRLTVITGISGSGKSTLAFDILYNEGQRRYLESLNAYARQFV 1054 Query: 669 EPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGV 718 +PA ++ + + I+Q +S AT T ++ +R LF + Sbjct: 1055 QPAARPEVDAIFGIPPTVAIEQRTSRGGRKSTVATQTELYHFLRLLFVKL 1104 Score = 200 bits (508), Expect = 3e-49, Method: Composition-based stats. Identities = 90/241 (37%), Positives = 134/241 (55%), Gaps = 28/241 (11%) Query: 727 TPGRFSFNVRGGRCEACQGDGVI---KVEMHFLPDIY----------VPCDQCKGKRYNR 773 P R SFN + G C +C G GV+ + ++ PC C+G+R Sbjct: 1250 DPRRLSFNSKHGWCPSCYGVGVVLAGFDALQTGEEVEWLVAESDAEPHPCPACQGRRLCP 1309 Query: 774 ETLEIKYKGKTIHEVLDMTIEEAREFFDA--------------VPALARKLQTLMDVGLT 819 E L I+++G+ I + +++E A FD+ +P L +L L +VGL+ Sbjct: 1310 EALAIRFQGRNIADYTALSVEAAAHIFDSLELTGREAAIARDLLPELCHRLAFLKEVGLS 1369 Query: 820 YIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLR 879 Y+ L ++A TLSGGEAQR++LA +L G Y+LDEPT GLH D + LLD L +LR Sbjct: 1370 YLTLDRAAPTLSGGEAQRIRLAAQLGSSLHG-ACYVLDEPTIGLHPRDNRMLLDSLRRLR 1428 Query: 880 DQGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLKPM 939 +GNTIVV+EH+ + I+ A+ ++DLGP G+ GG ++ +GTP +A+ S T R L Sbjct: 1429 AKGNTIVVVEHDEETIRCAEHVIDLGPAAGAAGGHVVATGTPLQLAQSADSLTGRLLAEP 1488 Query: 940 L 940 L Sbjct: 1489 L 1489 Score = 160 bits (404), Expect = 3e-37, Method: Composition-based stats. Identities = 82/310 (26%), Positives = 129/310 (41%), Gaps = 54/310 (17%) Query: 320 MLKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKENIEFKYMNDRGDTSIRRHPFEGVLH 379 L+ L + AP ++ + S +E + G Sbjct: 1551 NLRRLVAAKRSRSRAPLRDC----KDLIGWESIDRVLEVDQSPIGKTPRSCPATYVGFWD 1606 Query: 380 NMERRYKETESSAVRE----ELAKFISNRPCASCEGT----------------------- 412 ++ R + +TE + VR + + C +CEG Sbjct: 1607 DVRRLFAQTEEARVRGYGPGRFSFNTKDGRCPACEGQGLQRVAMSFLPDVTLRCDLCNGL 1666 Query: 413 RLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDRLKFLVN 472 R E V + A+ +S+ A EFF + ++I L+ L + Sbjct: 1667 RFTPETLAVEYRGQSIGAVLQLSVAEAAEFFG--------------VHRKIQHALRLLQD 1712 Query: 473 VGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGV--------MYVLDEPSIGLHQRDN 524 GL YL L + + TLSGGEAQR++L +++ G +Y+LDEP++GLH D Sbjct: 1713 TGLGYLALGQPSPTLSGGEAQRLKLVTELAKARPGERRGRSPHTLYLLDEPTVGLHMADV 1772 Query: 525 ERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVP 584 E+L+ L L GNTV+V+EH+ D + D +ID+GP G GG +VAEG E + V Sbjct: 1773 EKLIRVLHRLVAAGNTVVVIEHNLDMLAEVDWLIDLGPEGGQGGGRIVAEGAPETVAQVS 1832 Query: 585 E-SLTGQYMS 593 E S T + + Sbjct: 1833 EGSYTARLLD 1842 Score = 97.7 bits (242), Expect = 2e-18, Method: Composition-based stats. Identities = 37/119 (31%), Positives = 60/119 (50%), Gaps = 6/119 (5%) Query: 606 PANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGA 665 + ++ + + GAR NNL+++ L +P+G ITGVSGSGKS+L DT++ QR+ Sbjct: 3 KSLSKRCISIRGARQNNLRNLDLDIPLGELVVITGVSGSGKSSLAFDTVYAEGQRRYVET 62 Query: 666 TIAEPAPYRD------IQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGV 718 + D + ++ I IDQ+ R+ RS T T + ++ LFA Sbjct: 63 FSPYARQFLDRMDKPAAERIDGIPPAIAIDQTNPVRSSRSTVGTMTELNDHLKLLFARA 121 Score = 67.7 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 40/121 (33%), Positives = 60/121 (49%), Gaps = 3/121 (2%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 63 I + GA HNL I++ +P +L+ V+G+SGSGKS+L LYA RR V + +R Sbjct: 1507 IRLVGANRHNLHGIDVSLPLGRLVGVSGVSGSGKSTLVRTVLYA-NLRRLVAA--KRSRS 1563 Query: 64 FLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCPDH 123 L + D+ E + + ++Q PRS T D +R LFA+ E R + Sbjct: 1564 RAPLRDCKDLIGWESIDRVLEVDQSPIGKTPRSCPATYVGFWDDVRRLFAQTEEARVRGY 1623 Query: 124 D 124 Sbjct: 1624 G 1624 >UniRef50_B2UPV5 Excinuclease ABC, A subunit n=5 Tax=Bacteria RepID=B2UPV5_AKKM8 Length = 1840 Score = 1016 bits (2627), Expect = 0.0, Method: Composition-based stats. Identities = 388/955 (40%), Positives = 554/955 (58%), Gaps = 37/955 (3%) Query: 3 KIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYAR 62 +I +RGAR HNL+N+++ IP +L VVTG SGSGK+SLA TLYAEGQRRY+E+ S Y R Sbjct: 8 RIRIRGAREHNLQNVDVDIPLGRLTVVTGPSGSGKTSLAMHTLYAEGQRRYMETFSPYVR 67 Query: 63 QFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCPD 122 QF+ M+KPDVD +E + PAI++ Q+++ RSTVGT+T ++DY + +FAR+ P+ Sbjct: 68 QFMDRMDKPDVDAVENILPAIALHQRNSVRTSRSTVGTMTGLNDYWKFVFARLAVGIDPE 127 Query: 123 HDVPLAAQTVSQMVDNVLS-QPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARIDG 181 + +T + + + S P G +M+ + + + NL +QGY+RA G Sbjct: 128 TGREIKPETPGTIDEKLHSEFPAGTEVMVCLEVARPESVDLPSLKRNLVAQGYLRAFAHG 187 Query: 182 EVCDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTA-VVADMDDP 240 E+ L D L++ + VV DR ++ +D +R E+ ETA+ L GG A V+ +D Sbjct: 188 EILRLEDE-DWTLEEGEPLLVVQDRVRLSEDQRERRLEALETAMRLGGGVAHVIPRVDGV 246 Query: 241 KAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPEL 300 L F ++ + E P LFSFN+P GACP C G G D +R I+ PEL Sbjct: 247 WLSALKFRGDWH------PLMEPRPGLFSFNSPLGACPECRGYGRVITIDYNRCIR-PEL 299 Query: 301 SLAGGAIRGWDRRNFYYFQMLKSLAD-----HYKFDVEAPWGSLSANVHKVVLYGSGKEN 355 S+ GAI ++ + + + L K ++ PW L +LYG G + Sbjct: 300 SVQDGAIHIFEGDGKVFSECKRDLMRGWRKNARKVRLDVPWKDLKQWERDWLLYGDGDDP 359 Query: 356 IEFKYMNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGTRLR 415 D + + G+ + T VR L++F + + C SC G RLR Sbjct: 360 ----------DEMYEQGLWYGIAGFFKYLESRTHKMHVRVYLSRFRTYQECPSCHGLRLR 409 Query: 416 REARHVYVENTPLPAISDMSIGHAMEFFNN-LKLAGQRAKIAEKILKEIGDRLKFLVNVG 474 EA V +P +S M + + + + + + + E+ RL++L VG Sbjct: 410 PEALQFKVGGKSMPELSSMPMDELLVWVDRYVTPRADEDPGLKHAVAELRSRLEYLNEVG 469 Query: 475 LNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHL 534 L YLT RS +LSGGE +R+ L + +GA L ++VLDEP++GLH RD RL+ + L Sbjct: 470 LGYLTSDRSTRSLSGGEIERVSLTTCLGASLTDTLFVLDEPTVGLHPRDTSRLISAMNRL 529 Query: 535 RDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSG 594 + GNT++VVEH+E +RAAD ++D+GPG+G GG +V G I + ESLTG ++SG Sbjct: 530 KKRGNTLVVVEHEEAVMRAADCLVDMGPGSGREGGRLVYSGMPARIGEIEESLTGAFLSG 589 Query: 595 KRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTL 654 +R+I VPK+R P + L ++GA +NL+ + + +P+GLFTC+TGVSGSGKSTL +D L Sbjct: 590 RRRIAVPKRRRK--PRQFLTVSGATRHNLRKLDVKVPLGLFTCLTGVSGSGKSTLAHDVL 647 Query: 655 FPIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVREL 714 + A + EPA + I+G EH D+V+ +DQSPI RTPRS PA Y GVF +R L Sbjct: 648 YLNALVEKGAVCEEEPARVKSIKGWEHLDEVVMVDQSPIVRTPRSTPAVYAGVFEEIRSL 707 Query: 715 FAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRE 774 FA +RARG PG FSFN GRC C G G KVEM FL DI+V C C G RY E Sbjct: 708 FAETETARARGMKPGFFSFNSGDGRCPRCMGMGSEKVEMQFLSDIFVQCPLCHGSRYGSE 767 Query: 775 TLEIKYKGKTIHEVLDMTIEEAREFFDAVP-----ALARKLQTLMDVGLTYIRLGQSATT 829 L + G+ I +VL MT+ A E F A +A KL L VGL ++ LGQ T Sbjct: 768 VLSVYRDGRNIADVLGMTVAAALECFSAEKGAKASRIASKLGVLQRVGLGHLTLGQPLNT 827 Query: 830 LSGGEAQRVKLARELSKR----GTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTI 885 LSGGE QR+KLA+ L + + ILDEP TGLHFADI+ LL V +L +QG+T+ Sbjct: 828 LSGGENQRLKLAKILLDQIGSGANSSKMLILDEPGTGLHFADIEVLLAVFRELVEQGHTL 887 Query: 886 VVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLKPML 940 +VIEHN + IK+AD+++DLGPEGG+GGG ++ +GTPE + +T ++L+ +L Sbjct: 888 LVIEHNPEFIKSADYVIDLGPEGGAGGGHVVATGTPEEIVAAGKGYTGKYLREVL 942 Score = 610 bits (1573), Expect = e-173, Method: Composition-based stats. Identities = 255/554 (46%), Positives = 352/554 (63%), Gaps = 18/554 (3%) Query: 404 RPCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEI 463 C +C G RL AR V ++ I+ + A E + + A IA ++ EI Sbjct: 1284 TTCPACRGVRLNEFARAVRLQGVTPGDIASLPAVAAAELVKGWQFEREEALIARDVVAEI 1343 Query: 464 GDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRD 523 RL FL VGL YL+L RSA TLSGGE QRIRLASQ+G+ L GV+YVLDEP+IGLH RD Sbjct: 1344 TQRLNFLQRVGLGYLSLDRSATTLSGGETQRIRLASQLGSHLRGVLYVLDEPTIGLHPRD 1403 Query: 524 NERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAV 583 NE LLGTL L+ GNT++VVEHDED +R ADH++D+GPGAG+HGG ++A+G E + A+ Sbjct: 1404 NELLLGTLDELKRRGNTLLVVEHDEDTMRRADHIVDMGPGAGIHGGRIMAQGTFEELAAM 1463 Query: 584 PESLTGQYMSGKRKIEVPKKRVPANPEK----VLKLTGARGNNLKDVTLTLPVGLFTCIT 639 P+S+TG + K + KR +K L++ G +NLK V + +P G T +T Sbjct: 1464 PDSVTGAALHHKPRHPYRGKRRRIPSQKDESAWLRVEGCCLHNLKGVNVAIPKGRLTVLT 1523 Query: 640 GVSGSGKSTLINDTLFPIAQRQLNGATIAEPAP-YRDIQGLEHFDKVIDIDQSPIGRTPR 698 GVSG+GK++L+ T+ A++ + E ++ G + V +DQ+PIG+TPR Sbjct: 1524 GVSGAGKTSLMTGTIRLAARQAIGDKLTREQRKLWKTSSGFDSIRMVYGVDQNPIGKTPR 1583 Query: 699 SNPATYTGVFTPVRELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPD 758 S PATY G +R LFA ++R G+ GRFSFN G CE+C+G G+ K+EM FLP Sbjct: 1584 STPATYVGFLDDIRTLFAQTADARRLGFDRGRFSFNTGQGNCESCKGTGMQKLEMDFLPP 1643 Query: 759 IYVPCDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGL 818 YVPC+ C+GKRYN TL ++YKGKTI +VL M EA EFF++ P ++ L+ L + GL Sbjct: 1644 CYVPCETCRGKRYNAATLTVRYKGKTIADVLQMDFAEAAEFFESQPRISDPLKLLSETGL 1703 Query: 819 TYIRLGQSATTLSGGEAQRVKLARELSK------------RGTGQTLYILDEPTTGLHFA 866 Y+ LGQ++ TLSGGEAQR+KL EL K R LY+++EP+ GLH Sbjct: 1704 GYLTLGQASNTLSGGEAQRLKLVTELIKGRRVSRNALMKGRELPGDLYLIEEPSIGLHPR 1763 Query: 867 DIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAE 926 D++ L+DVLH+L DQGNT+VVIEHN +++ AD+++D+GP G GG I+ GTPE +A Sbjct: 1764 DVRLLIDVLHRLADQGNTVVVIEHNTEIMAEADYVIDMGPGPGDAGGTIVAEGTPEQIA- 1822 Query: 927 CEASHTARFLKPML 940 + S TA +++ L Sbjct: 1823 GKKSPTAEYIRREL 1836 Score = 312 bits (800), Expect = 4e-83, Method: Composition-based stats. Identities = 117/284 (41%), Positives = 170/284 (59%), Gaps = 4/284 (1%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 63 + +RGAR HNLKN++L +PR ++ V+TGLSGSGKSSLAFD +AEGQRR+++ +S YARQ Sbjct: 969 MALRGARHHNLKNVDLDVPRGEMTVLTGLSGSGKSSLAFDIFFAEGQRRFMDVMSPYARQ 1028 Query: 64 FLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCPDH 123 F +E PD+D + GL P ++IEQ + +STVGT+TEI ++RLL+A++G+ CP Sbjct: 1029 FTEQLESPDIDRLTGLPPTVAIEQNMSRGGTKSTVGTVTEIWQFMRLLYAKLGQAYCPQC 1088 Query: 124 DVPLAAQTVSQMVDNVL-SQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARIDGE 182 VP+ ++ S++V+ V + L LLAP+++ RKG + +GY +DG+ Sbjct: 1089 GVPVGKRSESEVVELVARELKKHGGLALLAPLVRGRKGHYADLARWAEGKGYEEMWVDGK 1148 Query: 183 VCDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVADMDDPKA 242 + LS L+ H +++VV R ++LA + ALE+ G V + Sbjct: 1149 LVPLSGFQPLDRYSSHDLDLVVAR-PEASWPPEKLAGAVHAALEMGEGFLQVLPPGSVRP 1207 Query: 243 EELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQ 286 E L AC CG S ELEP FSFN+P G CP C G G+ Sbjct: 1208 E--LMGTRLACASCGQSFPELEPYTFSFNSPRGWCPVCRGHGIV 1249 Score = 244 bits (623), Expect = 1e-62, Method: Composition-based stats. Identities = 124/417 (29%), Positives = 186/417 (44%), Gaps = 57/417 (13%) Query: 353 KENIEFKYMNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISN--------- 403 E + + GV + + ETE++ R F S Sbjct: 676 DEVVMVDQSPIVRTPRSTPAVYAGVFEEIRSLFAETETARARGMKPGFFSFNSGDGRCPR 735 Query: 404 ------------------RPCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNN 445 C C G+R E VY + + + M++ A+E F+ Sbjct: 736 CMGMGSEKVEMQFLSDIFVQCPLCHGSRYGSEVLSVYRDGRNIADVLGMTVAAALECFS- 794 Query: 446 LKLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLAS----QI 501 A + AK + I +L L VGL +LTL + TLSGGE QR++LA QI Sbjct: 795 ---AEKGAKASR-----IASKLGVLQRVGLGHLTLGQPLNTLSGGENQRLKLAKILLDQI 846 Query: 502 GAGL-VGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDI 560 G+G M +LDEP GLH D E LL L + G+T++V+EH+ + I++AD+VID+ Sbjct: 847 GSGANSSKMLILDEPGTGLHFADIEVLLAVFRELVEQGHTLLVIEHNPEFIKSADYVIDL 906 Query: 561 GPGAGVHGGEVVAEGPLEAIMAVPESLTGQYM----------SGKRKIEVPKKRVPANPE 610 GP G GG VVA G E I+A + TG+Y+ VP+ PE Sbjct: 907 GPEGGAGGGHVVATGTPEEIVAAGKGYTGKYLREVLEGNPSVYDPADAAVPESADMDIPE 966 Query: 611 KVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAEP 670 V+ L GAR +NLK+V L +P G T +TG+SGSGKS+L D F QR+ Sbjct: 967 GVMALRGARHHNLKNVDLDVPRGEMTVLTGLSGSGKSSLAFDIFFAEGQRRFMDVMSPYA 1026 Query: 671 APYRDIQGLEHFDKV------IDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPES 721 + + D++ + I+Q+ +S T T ++ +R L+A + ++ Sbjct: 1027 RQFTEQLESPDIDRLTGLPPTVAIEQNMSRGGTKSTVGTVTEIWQFMRLLYAKLGQA 1083 Score = 191 bits (486), Expect = 1e-46, Method: Composition-based stats. Identities = 84/248 (33%), Positives = 121/248 (48%), Gaps = 38/248 (15%) Query: 726 YTPGRFSFNVRGGRCEACQGDGVI--------------KVEMHFLPDIY---------VP 762 P FSFN G C C+G G++ + E+ + ++ Sbjct: 1226 LEPYTFSFNSPRGWCPVCRGHGIVGRGKVKEDQAQSLLEAELKYDRELARQADDDKGITT 1285 Query: 763 CDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFF--------------DAVPALAR 808 C C+G R N ++ +G T ++ + A E D V + + Sbjct: 1286 CPACRGVRLNEFARAVRLQGVTPGDIASLPAVAAAELVKGWQFEREEALIARDVVAEITQ 1345 Query: 809 KLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADI 868 +L L VGL Y+ L +SATTLSGGE QR++LA +L G LY+LDEPT GLH D Sbjct: 1346 RLNFLQRVGLGYLSLDRSATTLSGGETQRIRLASQLGSHLRG-VLYVLDEPTIGLHPRDN 1404 Query: 869 QQLLDVLHKLRDQGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECE 928 + LL L +L+ +GNT++V+EH+ D ++ AD IVD+GP G GG I+ GT E +A Sbjct: 1405 ELLLGTLDELKRRGNTLLVVEHDEDTMRRADHIVDMGPGAGIHGGRIMAQGTFEELAAMP 1464 Query: 929 ASHTARFL 936 S T L Sbjct: 1465 DSVTGAAL 1472 Score = 175 bits (444), Expect = 8e-42, Method: Composition-based stats. Identities = 87/303 (28%), Positives = 133/303 (43%), Gaps = 59/303 (19%) Query: 338 SLSANVHKVVLYGSGKENIEFKYMNDRGDTSIRRH----PFEGVLHNMERRYKET----- 388 L+ K+ SG ++I Y D+ + G L ++ + +T Sbjct: 1549 KLTREQRKLWKTSSGFDSIRMVYGVDQNPIGKTPRSTPATYVGFLDDIRTLFAQTADARR 1608 Query: 389 --------------------ESSAVREELAKFIS--NRPCASCEGTRLRREARHVYVENT 426 + + +++ F+ PC +C G R V + Sbjct: 1609 LGFDRGRFSFNTGQGNCESCKGTGMQKLEMDFLPPCYVPCETCRGKRYNAATLTVRYKGK 1668 Query: 427 PLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTLSRSAET 486 + + M A EFF + I D LK L GL YLTL +++ T Sbjct: 1669 TIADVLQMDFAEAAEFFES--------------QPRISDPLKLLSETGLGYLTLGQASNT 1714 Query: 487 LSGGEAQRIRLASQI-------------GAGLVGVMYVLDEPSIGLHQRDNERLLGTLIH 533 LSGGEAQR++L +++ G L G +Y+++EPSIGLH RD L+ L Sbjct: 1715 LSGGEAQRLKLVTELIKGRRVSRNALMKGRELPGDLYLIEEPSIGLHPRDVRLLIDVLHR 1774 Query: 534 LRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMS 593 L D GNTV+V+EH+ + + AD+VID+GPG G GG +VAEG E I +S T +Y+ Sbjct: 1775 LADQGNTVVVIEHNTEIMAEADYVIDMGPGPGDAGGTIVAEGTPEQIAG-KKSPTAEYIR 1833 Query: 594 GKR 596 + Sbjct: 1834 REL 1836 Score = 92.3 bits (228), Expect = 7e-17, Method: Composition-based stats. Identities = 34/115 (29%), Positives = 58/115 (50%), Gaps = 6/115 (5%) Query: 610 EKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAE 669 + +++ GAR +NL++V + +P+G T +TG SGSGK++L TL+ QR+ Sbjct: 6 DGRIRIRGAREHNLQNVDVDIPLGRLTVVTGPSGSGKTSLAMHTLYAEGQRRYMETFSPY 65 Query: 670 PAPY------RDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGV 718 + D+ +E+ I + Q RT RS T TG+ + +FA + Sbjct: 66 VRQFMDRMDKPDVDAVENILPAIALHQRNSVRTSRSTVGTMTGLNDYWKFVFARL 120 Score = 88.8 bits (219), Expect = 1e-15, Method: Composition-based stats. Identities = 36/116 (31%), Positives = 56/116 (48%), Gaps = 5/116 (4%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 63 + V G HNLK +N+ IP+ +L V+TG+SG+GK+SL T+ ++ + L+ R+ Sbjct: 1497 LRVEGCCLHNLKGVNVAIPKGRLTVLTGVSGAGKTSLMTGTIRLAARQAIGDKLTREQRK 1556 Query: 64 FLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPR 119 D I ++Q PRST T D +R LFA+ + R Sbjct: 1557 LWKTSS--GFDSIR---MVYGVDQNPIGKTPRSTPATYVGFLDDIRTLFAQTADAR 1607 >UniRef50_D2R1K2 Excinuclease ABC, A subunit n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2R1K2_9PLAN Length = 966 Score = 1016 bits (2626), Expect = 0.0, Method: Composition-based stats. Identities = 384/954 (40%), Positives = 547/954 (57%), Gaps = 38/954 (3%) Query: 3 KIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYAR 62 IE+RG HNL+ ++L +P KL+V G+SGSGK+SLA DTLYAEGQRRY+ES S Y R Sbjct: 18 SIELRGVEVHNLRMVDLDVPLGKLVVFCGVSGSGKTSLALDTLYAEGQRRYLESFSVYTR 77 Query: 63 QFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCPD 122 QFL +EKPDV+ I+ L AI++ + + RST+GT TE DYLRLL A+V E C Sbjct: 78 QFLQKLEKPDVERIDNLPAAIAVSHDDAARSSRSTIGTATETLDYLRLLMAKVAELTCHG 137 Query: 123 HDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARIDGE 182 + + S + V S +LML +L +G+ R + Sbjct: 138 CGKSIRKASASTIAAEVQSLDPSTKLMLGFFEPVPEGIALETLAASLRGRGFSRGVVGET 197 Query: 183 VCDLSDPP-KLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAV-------- 233 L P ++ + V+VDR QRL +S ET+L GG V Sbjct: 198 SFMLDTIPSEMVSSSASELGVIVDRI-TPTVAQQRLLDSLETSLTSGGGACVLWRAVRDD 256 Query: 234 ------VADMDDPKAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQ 287 V +D + + L +S C C + P+LFSFN+P GAC C+G G Sbjct: 257 ETSTPDVVVIDGQRWQRLDYSQRLQCRACQIVYSDPTPQLFSFNSPLGACNVCEGFGSTI 316 Query: 288 YFDPDRVIQNPELSLAGGAIRGWDRRNFYY-FQMLKSLADHYKFDVEAPWGSLSANVHKV 346 D ++ + S+ GAI W+ + + Q L +LA YK V+ P+ L+ ++ Sbjct: 317 DLDDALIVPDRSKSIREGAIAPWNSPAYLHELQELLALAPDYKLPVDVPYSELTEKHKQL 376 Query: 347 VLYGSGKENIEFKYMNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPC 406 + G + + G +ERR +R L+++ S++ C Sbjct: 377 IREGVPERDF---------------GGLRGFFAWLERR---KYKMHIRVFLSRWRSSKLC 418 Query: 407 ASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDR 466 +C G RL E+ + + I+ + I A E L L+ + K+A +L +I R Sbjct: 419 HACHGARLNAESLSWRIAGKNISEITALRIDEAAELLAALSLSATQKKLARVMLDQIQSR 478 Query: 467 LKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNER 526 L FL VGL YL L R+ TLSGGEAQR+ L S +G+ LV ++YVLDEPS+GLH D ER Sbjct: 479 LAFLRQVGLGYLKLDRTLRTLSGGEAQRVALTSALGSSLVNMLYVLDEPSVGLHPSDVER 538 Query: 527 LLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPES 586 LL + LRD GNTV++VEH+E +R +D ++++GPGAG GG + G L+ ++A + Sbjct: 539 LLVAVKGLRDRGNTVVLVEHEEQMLRESDWLVEVGPGAGDAGGNITFSGELDEMLA-GTT 597 Query: 587 LTGQYMSGKRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGK 646 +TG +++G+R + +P R A LKL+GARGNNLK++T+ P+G+ +TGVSGSGK Sbjct: 598 VTGDFLAGRRGVAIPAARRTAT-RGWLKLSGARGNNLKNLTVEFPLGVMCLVTGVSGSGK 656 Query: 647 STLINDTLFPIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTG 706 STL+ +TL+ ++ P Y D+ G D VI +DQSPIGR+ RSNP TY Sbjct: 657 STLVQETLYGALCKR-KRKDCDPPLDYDDVVGDGQIDDVILVDQSPIGRSGRSNPVTYIK 715 Query: 707 VFTPVRELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQC 766 F P+R +FA ++R YT G FSFNV GGRC+ACQG+G ++++M FL D+ C C Sbjct: 716 AFDPIRAVFAEQVDARTHNYTAGHFSFNVDGGRCDACQGEGFLRIDMQFLADVLRKCPAC 775 Query: 767 KGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQS 826 G RY +E L++KY+G++I EVL+MT EA FF P + KL+ L+DVGL Y+RLGQ Sbjct: 776 GGSRYRKEILQVKYRGRSIAEVLEMTAREAFSFFRGQPKVQGKLKQLIDVGLDYLRLGQP 835 Query: 827 ATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIV 886 A+TLS GEAQR+KLA LS+ +TL+ILDEPTTGLHFAD+ +LLD L D G++++ Sbjct: 836 ASTLSSGEAQRLKLAAFLSEASRNRTLFILDEPTTGLHFADVVKLLDCFEALLDVGHSLI 895 Query: 887 VIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLKPML 940 ++EHNL +++ AD+++DLGP G GG ++ GTPE VA S T ++L L Sbjct: 896 IVEHNLQLMRAADYLIDLGPGAGDAGGTVIAQGTPEQVATSPLSLTGKYLAASL 949 Score = 91.5 bits (226), Expect = 1e-16, Method: Composition-based stats. Identities = 51/226 (22%), Positives = 89/226 (39%), Gaps = 17/226 (7%) Query: 606 PANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGA 665 P+ ++ ++L G +NL+ V L +P+G GVSGSGK++L DTL+ QR+ + Sbjct: 12 PSTGDRSIELRGVEVHNLRMVDLDVPLGKLVVFCGVSGSGKTSLALDTLYAEGQRRYLES 71 Query: 666 TIAEPAPYR------DIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVP 719 + D++ +++ I + R+ RS T T +R L A V Sbjct: 72 FSVYTRQFLQKLEKPDVERIDNLPAAIAVSHDDAARSSRSTIGTATETLDYLRLLMAKVA 131 Query: 720 ESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDI------YVPCDQCKGKRYNR 773 E G + E D K+ + F + +G+ ++R Sbjct: 132 ELTCHGCGKSIRKASASTIAAEVQSLDPSTKLMLGFFEPVPEGIALETLAASLRGRGFSR 191 Query: 774 ETL-EIKYKGKTI-HEVLDMTIEEAREFFDAVP---ALARKLQTLM 814 + E + TI E++ + E D + A R L +L Sbjct: 192 GVVGETSFMLDTIPSEMVSSSASELGVIVDRITPTVAQQRLLDSLE 237 >UniRef50_B1ZMZ6 Excinuclease ABC, A subunit n=1 Tax=Opitutus terrae PB90-1 RepID=B1ZMZ6_OPITP Length = 999 Score = 1013 bits (2619), Expect = 0.0, Method: Composition-based stats. Identities = 439/995 (44%), Positives = 580/995 (58%), Gaps = 90/995 (9%) Query: 27 IVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQFLSLMEKPDVDHIEGLSPAISIE 86 +V+TG SGSGKSSLAFDTLYAEG R+Y+ESLS ARQ L + +PDVD I GLSP ++IE Sbjct: 1 MVITGPSGSGKSSLAFDTLYAEGYRKYMESLSTQARQVLEQLRRPDVDFIHGLSPVLAIE 60 Query: 87 QKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCPDHDVPLAAQTVSQMVDNVLSQPEGK 146 Q++ S PRST+ T TE+ DY +LL+A GE RCP + +++ V VL++ G+ Sbjct: 61 QRTGSGGPRSTIATATELADYAQLLWALCGEQRCPKDGGRVVQRSLDGNVQRVLTECAGE 120 Query: 147 RLMLLAPIIKERKGEHTKTLENLASQGYIRARIDGEVCDLSDP---PKLELQKKHTIEVV 203 R+MLLAP ++ + + L L +G+ R R+DGEV +L +P P K T+++V Sbjct: 121 RIMLLAPAMQAKASVLREELPRLRQRGFQRVRLDGEVRNLDEPKLIPANAGAKLITVDLV 180 Query: 204 VDRFKVRDDLTQRLAESFETALELSGGTAVVADMDDP----------------------- 240 +DR D RLA+S E A A+V Sbjct: 181 IDRLVANADQRSRLADSLELAFREGKDRAIVLAQKQAAGRVASVAGVVDPGPGSASPATT 240 Query: 241 ------KAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRV 294 + E+ S + AC +CG L P+ FSFN+ GACPTC GLG + F P+ + Sbjct: 241 SASAPAEWREIPLSQSLACEVCGDVFERLTPKHFSFNHSEGACPTCGGLGRKMRFVPELI 300 Query: 295 IQNPELSLAGGAIRGWDRRN----FYYFQMLKSLADHYKFDVEAPWGSLSANVHKVVLYG 350 + +PE S+ GAI+ W + +LK LA+ FD + PW SLS + VL+G Sbjct: 301 VPDPEKSVREGAIKPWRIGGKNLIIKHNALLKQLAEQLPFDPDVPWRSLSEETRRAVLHG 360 Query: 351 SGKENIEFKYMNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCE 410 +G+ FK R + PF GV+ ++E ++ T+S R L F+ C C Sbjct: 361 AGERQFAFKLRRMREPKT---MPFAGVIADLEESWRHTDSEGFRARLTTFMVAGECPECH 417 Query: 411 GTRLRREARHVYVE---------------------------------NTPLPAISDMSIG 437 GTRL + V + P + + I Sbjct: 418 GTRLNARSGAVRLNLGSEPAPSGTGVPPVDSGSASDDHGRDARATTSPLSFPEFNALDIE 477 Query: 438 HAMEFFNNLKLAGQRA------------KIAEKILKEIGDRLKFLVNVGLNYLTLSRSAE 485 A EF L + +++ I RL FL GL YLTL R Sbjct: 478 AAHEFARRLDIEAAHEFARRAVATYGDNDAVREVVTGIEQRLHFLAETGLGYLTLDRDYA 537 Query: 486 TLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVE 545 TLSGGEAQR+RLA+Q+G GL+GV+YVLDEPSIGLH DN++LL TL+ LRD GNTVIVVE Sbjct: 538 TLSGGEAQRVRLATQLGMGLMGVIYVLDEPSIGLHPHDNQKLLDTLVALRDRGNTVIVVE 597 Query: 546 HDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPE--SLTGQYMSGKRKIEVPKK 603 HDE+ +R AD +I++GP AGV GG V+ +G M + S TG Y+ R + V K Sbjct: 598 HDEETMRLADELIELGPEAGVEGGRVLFQGSPADCMKLSAKVSRTGPYL--ARTMGVTKD 655 Query: 604 RVPANPEK-VLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQL 662 P+ L + AR NNL+ + PVGL TC+TGVSGSGKSTL+ND L A R+L Sbjct: 656 AATKQPDGAWLTVREARENNLRGIDARFPVGLLTCVTGVSGSGKSTLVNDILAAAAARKL 715 Query: 663 NGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESR 722 NGA P +R I+ L+ F+K++ +DQ PIGR+PRSNPATY + +R+LFA +P ++ Sbjct: 716 NGAKTL-PGKHRAIENLDFFEKLVRVDQEPIGRSPRSNPATYVDLLGLLRDLFAQMPLAK 774 Query: 723 ARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKYKG 782 RGY RFSFNVRGGRCE CQGDGVIK++M FL D Y PC C G+R+NRETLE+ + G Sbjct: 775 IRGYKASRFSFNVRGGRCERCQGDGVIKLDMQFLADAYAPCPSCGGRRFNRETLEVLFHG 834 Query: 783 KTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLAR 842 K+I +VLD+T+ EA F +P + KL TL VGL Y+ LGQSATTLSGGEAQR+KL+ Sbjct: 835 KSIADVLDLTVREAMSLFRNIPRVMDKLTTLDAVGLGYLTLGQSATTLSGGEAQRIKLSL 894 Query: 843 ELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADWIV 902 ELSKR G TLYILDEPTTGLH+ DIQ+L+D+L KLRD GNT++VIEHNLDVI ADWI+ Sbjct: 895 ELSKRQQGHTLYILDEPTTGLHWVDIQKLMDLLFKLRDAGNTVIVIEHNLDVINLADWII 954 Query: 903 DLGPEGGSGGGEILVSGTPETVAECEASHTARFLK 937 DLGP GG GG+++ +G + S T L+ Sbjct: 955 DLGPGGGRAGGDVVFAGPRTEIELKAPSLTGAALR 989 Score = 96.9 bits (240), Expect = 3e-18, Method: Composition-based stats. Identities = 36/115 (31%), Positives = 55/115 (47%), Gaps = 13/115 (11%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 63 + VR AR +NL+ I+ P L VTG+SGSGKS+L D L A R+ + + + Sbjct: 666 LTVREARENNLRGIDARFPVGLLTCVTGVSGSGKSTLVNDILAAAAARKLNGAKTLPGKH 725 Query: 64 FLSLMEKPDVDHIEGLS---PAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARV 115 IE L + ++Q+ +PRS T ++ LR LFA++ Sbjct: 726 R----------AIENLDFFEKLVRVDQEPIGRSPRSNPATYVDLLGLLRDLFAQM 770 >UniRef50_B1XYK7 Excinuclease ABC, A subunit n=2 Tax=Burkholderiales Genera incertae sedis RepID=B1XYK7_LEPCP Length = 1935 Score = 1012 bits (2617), Expect = 0.0, Method: Composition-based stats. Identities = 383/988 (38%), Positives = 528/988 (53%), Gaps = 73/988 (7%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 63 I +RGAR HNLKN++L I +L VVTG SGSGKSSL FDTLYAEGQRRYVE+ SAYARQ Sbjct: 17 IRIRGARQHNLKNLDLDIRTGELTVVTGPSGSGKSSLVFDTLYAEGQRRYVETFSAYARQ 76 Query: 64 FLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCPDH 123 FL M++P VD +EG+ PAI+I+Q + RSTVGT+TE++D+L+LLFAR + D Sbjct: 77 FLDRMDRPAVDSVEGVPPAIAIDQTNPVRTSRSTVGTMTELNDHLKLLFARAAQLFDQDT 136 Query: 124 DVPLAAQTVSQMVDNVLSQPEGK---RLMLLAPIIKERKGEHTKTLENLASQGYIRARID 180 P+ + ++ ++ E RL++ P+ + + L++ GY R + Sbjct: 137 AQPVREDDPDTIWADLKARSEAAGDPRLVITFPVELPAGTTPAEIEQWLSASGYTRVHAE 196 Query: 181 GEVCDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGT-AVVADMDD 239 EV + P K+ ++VV DRF+ R+ E+ ETAL+ G V D Sbjct: 197 REVATPTGPRKV-------LDVVADRFRFSGAEKIRVNEALETALKRGGRCNVYVVPTDG 249 Query: 240 PKAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPE 299 + +S CP +P +FSFN+ GAC TC G G D VI +P Sbjct: 250 GDEQVWRYSQGLHCPESDRRYSHPQPAMFSFNSAFGACETCRGFGRVIGVDFGLVIPDPR 309 Query: 300 LSLAGGAIRGWDRRNFYYFQ-MLKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKENIEF 358 +L GGAI+ + Q L A ++ W LS + V+ GS ++ Sbjct: 310 KTLRGGAIKPLTTPAWKECQDDLIKYAGDAGIPRDSAWAQLSESQKSWVIDGSPNWTGKW 369 Query: 359 KYMNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGTRLRREA 418 + G+ E + +R L+K+ S PC C G RL+ E+ Sbjct: 370 ------------NQQWYGIKRFFEYLESKAYKMHIRVLLSKYRSYTPCGDCGGARLKTES 417 Query: 419 RHVYVE-------------------------------NTPLPAISDMSIGHAMEFFNNLK 447 + L + + I FF+ L Sbjct: 418 LLWRLGEKQQADLGLPPAKRFMPVGVKWSRAQLEALPGLSLHDLMLLPIDRMRVFFDKLD 477 Query: 448 LAGQR-AKIAEKILKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLV 506 L Q + +L EI RLK+L +VGL YL+L R + TLSGGE QRI L + +G LV Sbjct: 478 LPSQMLDDALQLLLDEIRTRLKYLCDVGLGYLSLDRQSRTLSGGEVQRINLTTALGTSLV 537 Query: 507 GVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGV 566 ++VLDEPSIGLH RD R+ ++ LRD GNT++VVEHD + AAD VID+GPG G Sbjct: 538 NTLFVLDEPSIGLHPRDMHRINEAMLRLRDAGNTLVVVEHDPAVMLAADRVIDLGPGPGT 597 Query: 567 HGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEVPKKRVPANPEKVLKLTGARGNNLKDV 626 GG +V +G E + A E+LTG Y+ +R I + R + L + G R +NLK++ Sbjct: 598 QGGRIVFDGTPEDLKAA-ETLTGAYLGARRSIGLGLMRPVLDSTPRLIIEGVREHNLKNI 656 Query: 627 TLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAEPAPYRDIQGLEHFDKVI 686 ++ P+ C+TGVSGSGKSTL+ D L+P R G P + + G + + Sbjct: 657 SVEFPLQRLVCVTGVSGSGKSTLMQDVLYPALARHF-GQASESPGEHDRLLGADWISDAV 715 Query: 687 DIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESRARGYTPGRFSFNVRGGRCEACQGD 746 +DQSPIG+T RSNPA+Y G F VR++FA +P ++ R YT G FSFN GRC C G Sbjct: 716 FVDQSPIGKTARSNPASYVGAFDTVRDIFAALPAAQQRNYTAGMFSFNAGDGRCPTCGGS 775 Query: 747 GVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKY----KGKTIHEVLDMTIEEAREFFDA 802 G VEM FL D+Y+ C C G RY E E+K K +I +VL++T+ +A F Sbjct: 776 GFEHVEMQFLSDVYLRCPDCDGTRYRPELREVKVERLGKSLSISDVLELTVADAVRLFAD 835 Query: 803 VPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELS-----------KRGTGQ 851 + R LQ L DVGL Y++LGQ TLSGGEAQR+KLA L+ K Sbjct: 836 DREVVRALQPLADVGLDYVKLGQPVPTLSGGEAQRLKLAGFLAEAAKSGSASKQKLARKG 895 Query: 852 TLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADWIVDLGPEGGSG 911 TL++ DEPTTGLHF DI +L+ KL + G++++VIEHNLDV++ +DWIVDLGPEGG Sbjct: 896 TLFLFDEPTTGLHFDDIAKLMRAFRKLLEAGHSLLVIEHNLDVVRASDWIVDLGPEGGEA 955 Query: 912 GGEILVSGTPETVAECEASHTARFLKPM 939 GGE++ GTP + SHT + L+ Sbjct: 956 GGELVAEGTPADLRAHPTSHTGQSLREY 983 Score = 841 bits (2173), Expect = 0.0, Method: Composition-based stats. Identities = 387/985 (39%), Positives = 538/985 (54%), Gaps = 118/985 (11%) Query: 2 DKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYA 61 + I++ AR HNLK +++ IPR K VVTG+SGSGKS+LAFD L+ EGQRRY+ESL+AYA Sbjct: 1021 EMIQIVNAREHNLKGLSVNIPRGKFSVVTGVSGSGKSTLAFDILFNEGQRRYLESLNAYA 1080 Query: 62 RQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCP 121 R + +P+VD + G+ P ++IEQ+ + +STV T TE+ +LRLL+ ++G CP Sbjct: 1081 RSIVQPAGRPEVDAVYGIPPTVAIEQRLSRGGRKSTVATTTEVWHFLRLLYVKLGTLYCP 1140 Query: 122 DHD------------------VPLAAQTVSQMVDNVLSQPE-----GKRLMLLAPIIKER 158 V + QT Q+ +L PE G+ + LLAP++ R Sbjct: 1141 KCSDFHAPHGDVAPGQDPDGWVAVRPQTPEQIAAQMLRAPEAGGYRGQHIGLLAPLVVNR 1200 Query: 159 KGEHTKTLENLASQGYIRARIDGEVCDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLA 218 KG +T + +GY R+DGE PK++ K+HTIE+ V V D L Sbjct: 1201 KGVYTDLAKWAKGKGYTHLRVDGEFLPTDKWPKIDRYKEHTIELPVADLIVEVDNEPLLK 1260 Query: 219 ESFETALELSGGTAVVADMDDPKAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACP 278 ALE G + A G R ++FS ACP Sbjct: 1261 AKLAEALEHGKGVLHLLTPLKG------LKTAMAAGESGRIGRT---QVFSIKR---ACP 1308 Query: 279 TCDGLGVQQ-YFDPDRVIQNPELSLAGGAIRGWDRRNFYYFQMLKSLADHYKFDVEAPWG 337 C G DP N + + + Sbjct: 1309 QC---GTSYPELDPRMF-----------------SYNSKHGWCVDCVGTGLT-------- 1340 Query: 338 SLSANVHKVVLYGSGKENIEFKYMNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREEL 397 L+ K + ++ + + E+ + E E Sbjct: 1341 -LTREQRKALDDTQQDDDNKGR----------------------EKTFAEPEVED----- 1372 Query: 398 AKFISNRPCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAE 457 + + PC +C G RL ++ V + A++ +S+ A + KL G+ IA Sbjct: 1373 ---LVDAPCGTCHGARLNPVSQAVRFRGESIAALAALSVNDAARWVARQKLDGREGAIAR 1429 Query: 458 KILKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSI 517 ++ EI RL FL VGL YLTL R+A TLSGGEAQRIRLA+Q+G+ L GV YVLDEP+I Sbjct: 1430 DVVSEIRSRLSFLDEVGLGYLTLDRAAPTLSGGEAQRIRLAAQLGSNLQGVCYVLDEPTI 1489 Query: 518 GLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPL 577 GLH RDN+ LL L L GNT++VVEHDED IR ADH+IDIGPGAG GG ++AEG Sbjct: 1490 GLHPRDNQVLLNALHKLGASGNTLVVVEHDEDTIRRADHIIDIGPGAGRRGGRIMAEGTA 1549 Query: 578 EAIMAVPESLTGQYMSGKRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTC 637 +M P+S+TG++++ K + +R L L GA+ +NL+DV + +P+ Sbjct: 1550 AELMLHPDSITGRFLNAPLKHPLKARRPVDAQTPGLTLRGAKLHNLRDVDVEVPLARLVA 1609 Query: 638 ITGVSGSGKSTLINDTLFPIAQRQLNGATIAE-------PAPYRDIQGLEHFDKVIDIDQ 690 +TGVSGSGKSTL D L Q +N + ++G + D+V+++DQ Sbjct: 1610 VTGVSGSGKSTLARDVLLANVQAIVNHKLAGKNAGARPAWTGCTGLEGWSNVDRVLEVDQ 1669 Query: 691 SPIGRTPRSNPATYTGVFTPVRELFAGVPESRARGYTPGRFSFNV------RGGRCEACQ 744 +PIG+TPRS PATY G + +R+LF E++ARGY GRFSFN+ GGRC C+ Sbjct: 1670 TPIGKTPRSCPATYIGFWDTIRKLFTETLEAKARGYAAGRFSFNIGGKSAGGGGRCPGCE 1729 Query: 745 GDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAVP 804 G G+ +EM FLPD+ VPCD C G R+N ETL + ++GK+I EVL M ++EA +FF ++P Sbjct: 1730 GQGMRTIEMAFLPDVKVPCDLCHGARFNPETLAVTWRGKSIGEVLQMEVDEAVDFFASMP 1789 Query: 805 ALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSK---------RGTGQTLYI 855 ++A LQ L DVGL Y+ LGQ + TLSGGEAQR+KL ELSK + TLY+ Sbjct: 1790 SIAHPLQLLKDVGLGYLTLGQPSPTLSGGEAQRIKLVTELSKVRDDVTRRGQKAPHTLYV 1849 Query: 856 LDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEI 915 LDEPT GLH AD+++L+ VLH+L D G++++VIEH+LDVI ADW++DLGPEGGSGGG++ Sbjct: 1850 LDEPTVGLHMADVEKLIKVLHRLVDGGHSVIVIEHDLDVIAEADWVIDLGPEGGSGGGQV 1909 Query: 916 LVSGTPETVAECEASHTARFLKPML 940 +V GTPE V + SHT LK +L Sbjct: 1910 VVCGTPEAVVKSR-SHTGVALKAVL 1933 Score = 222 bits (566), Expect = 5e-56, Method: Composition-based stats. Identities = 114/394 (28%), Positives = 182/394 (46%), Gaps = 63/394 (15%) Query: 403 NRPCASCEGTRLRREARHVYVE----NTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEK 458 C C+GTR R E R V VE + + + ++++ A+ F + Sbjct: 789 YLRCPDCDGTRYRPELREVKVERLGKSLSISDVLELTVADAVRLFAD------------- 835 Query: 459 ILKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLV------------ 506 +E+ L+ L +VGL+Y+ L + TLSGGEAQR++LA + Sbjct: 836 -DREVVRALQPLADVGLDYVKLGQPVPTLSGGEAQRLKLAGFLAEAAKSGSASKQKLARK 894 Query: 507 GVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGV 566 G +++ DEP+ GLH D +L+ L + G++++V+EH+ D +RA+D ++D+GP G Sbjct: 895 GTLFLFDEPTTGLHFDDIAKLMRAFRKLLEAGHSLLVIEHNLDVVRASDWIVDLGPEGGE 954 Query: 567 HGGEVVAEGPLEAIMAVPESLTGQYMSG----------------------KRKIEVPKKR 604 GGE+VAEG + A P S TGQ + K + + K+ Sbjct: 955 AGGELVAEGTPADLRAHPTSHTGQSLREYDLSLGTGGIAVEEGRPLQWVVKARRDEAKRA 1014 Query: 605 VPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNG 664 V ++++++ AR +NLK +++ +P G F+ +TGVSGSGKSTL D LF QR+ Sbjct: 1015 VGNIADEMIQIVNAREHNLKGLSVNIPRGKFSVVTGVSGSGKSTLAFDILFNEGQRRYLE 1074 Query: 665 ATIAEPAPYRDIQGLEHFDKV------IDIDQSPIGRTPRSNPATYTGVFTPVRELFAGV 718 + A G D V + I+Q +S AT T V+ +R L+ + Sbjct: 1075 SLNAYARSIVQPAGRPEVDAVYGIPPTVAIEQRLSRGGRKSTVATTTEVWHFLRLLYVKL 1134 Query: 719 PESRARGYTPGRFSFNVRGGR-CEACQGDGVIKV 751 Y P F+ G DG + V Sbjct: 1135 GTL----YCPKCSDFHAPHGDVAPGQDPDGWVAV 1164 Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats. Identities = 44/143 (30%), Positives = 63/143 (44%), Gaps = 32/143 (22%) Query: 3 KIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYAR 62 ++ + G R HNLKNI++ P +L+ VTG+SGSGKS+L D LY A AR Sbjct: 642 RLIIEGVREHNLKNISVEFPLQRLVCVTGVSGSGKSTLMQDVLY-----------PALAR 690 Query: 63 QFLSLMEKP-DVDHIEG---LSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFA----- 113 F E P + D + G +S A+ ++Q RS + D +R +FA Sbjct: 691 HFGQASESPGEHDRLLGADWISDAVFVDQSPIGKTARSNPASYVGAFDTVRDIFAALPAA 750 Query: 114 ------------RVGEPRCPDHD 124 G+ RCP Sbjct: 751 QQRNYTAGMFSFNAGDGRCPTCG 773 Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats. Identities = 42/130 (32%), Positives = 65/130 (50%), Gaps = 9/130 (6%) Query: 600 VPKKRVPANPEK---VLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFP 656 +P + P K ++++ GAR +NLK++ L + G T +TG SGSGKS+L+ DTL+ Sbjct: 1 MPGQNAPPTSVKRTGLIRIRGARQHNLKNLDLDIRTGELTVVTGPSGSGKSSLVFDTLYA 60 Query: 657 IAQRQLNGATIAEPAPYRD------IQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTP 710 QR+ A + D + +E I IDQ+ RT RS T T + Sbjct: 61 EGQRRYVETFSAYARQFLDRMDRPAVDSVEGVPPAIAIDQTNPVRTSRSTVGTMTELNDH 120 Query: 711 VRELFAGVPE 720 ++ LFA + Sbjct: 121 LKLLFARAAQ 130 >UniRef50_A0LG77 UvrA family protein n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LG77_SYNFM Length = 1895 Score = 1012 bits (2617), Expect = 0.0, Method: Composition-based stats. Identities = 403/943 (42%), Positives = 582/943 (61%), Gaps = 37/943 (3%) Query: 3 KIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYAR 62 +I +RGAR HNL+ + +PR+++IV+TGLSGSGKSSLAFD L+AEGQRRY+E LSAY R Sbjct: 957 EIVIRGAREHNLQVDEIRLPRNEMIVLTGLSGSGKSSLAFDVLFAEGQRRYLECLSAYVR 1016 Query: 63 QFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCPD 122 Q+ +MEKPDV+ I GL P I+IEQ+++ N RSTV TITEI+ +LRLL++++G CPD Sbjct: 1017 QYFKIMEKPDVEQILGLPPTIAIEQRTSRLNRRSTVATITEIYHFLRLLYSKLGRQHCPD 1076 Query: 123 HDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARIDGE 182 LA+ T Q++ V ++ +LLAP+++ RKG + L G+ + R+DG+ Sbjct: 1077 CGRELASLTYDQILSMVEAEARKGNNLLLAPLVRGRKGIYRDLFMRLRKMGFEKVRVDGQ 1136 Query: 183 VCDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVADMDDPKA 242 L P++ ++H IEV+V + LAE AL L GT + Sbjct: 1137 WMPLDPVPEIARHREHDIEVLVSAAGTKKGPRATLAERVRQALSLGAGTLHL-----EGN 1191 Query: 243 EELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPELSL 302 E ++S CP C + L+PRLFSFN+ GACP+C GLG + F +R++ P++ L Sbjct: 1192 ESRVYSQRLYCPACEKGLAPLDPRLFSFNSRHGACPSCTGLGTVRQFSVERLLGPPDMPL 1251 Query: 303 AGGAIRG-----WDRRNFYYFQMLKSLA-DHYKFDVEAPWGSLSANVHKVVLYGSGKENI 356 G + W + + L+ D D PW L + + +L+G G+ Sbjct: 1252 KDGLLGFLRSQVWPKGLKTEGRKLERFWIDRLGIDPGRPWRELPEDAREAMLHGRGRGA- 1310 Query: 357 EFKYMNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGTRLRR 416 G+L +ER KE +S+ L F + C C G RL R Sbjct: 1311 ------------------PGLLAVLER-VKEEDSAWS--SLEPFHDDVVCPECGGRRLNR 1349 Query: 417 EARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNVGLN 476 +AR V V+ + ++ ++I + + + + I I +E+ +R+ FL VGL+ Sbjct: 1350 QARSVAVQGLGIGDLTSLAISDFLRKWKRFRFDPKDRPIVAPISREVAERVSFLQKVGLD 1409 Query: 477 YLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRD 536 YL L R+ +TLSGGE QRIRLA+Q+G+ L GV YVLDEP+IGLH DN RLL +L L++ Sbjct: 1410 YLALDRAGDTLSGGETQRIRLAAQLGSNLRGVCYVLDEPTIGLHPVDNGRLLESLARLKE 1469 Query: 537 LGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGK- 595 GNT++VVEHD D +R AD ++++GP AG GG + A+G EA+ +LTG + S Sbjct: 1470 KGNTILVVEHDADTMRQADTLVELGPEAGRGGGRLTAQGSFEALCGDARTLTGAWFSRSL 1529 Query: 596 RKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLF 655 + + R L++ GA NLK + + +P+G T +TGVSG+GKSTL+++ ++ Sbjct: 1530 DDLYLASDRKTPGESGWLEIKGASARNLKKIDVRVPLGALTVVTGVSGAGKSTLVHEVVY 1589 Query: 656 PIAQRQLNGA-TIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVREL 714 + +L G + PA + G + +V+++D +PIGRTPRS PATY G++ +R++ Sbjct: 1590 RGLRERLGGRYKVRAPAELESMSGHDAVQRVLEVDHNPIGRTPRSTPATYVGIWDEIRKI 1649 Query: 715 FAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRE 774 FA +PESRARG+ PGRFS+NV+GGRCE+C+G G I+VEM FLPD+ VPC+ C G R+N E Sbjct: 1650 FAMLPESRARGFNPGRFSYNVKGGRCESCKGQGEIRVEMSFLPDVSVPCETCGGSRFNTE 1709 Query: 775 TLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGE 834 TL +YKGK+I +VL MTI+EA E FDA P +A+ L+ L D+GL Y+ +GQS+ TLSGGE Sbjct: 1710 TLAARYKGKSIADVLKMTIDEAAELFDAYPRVAKPLRVLTDLGLGYLAIGQSSPTLSGGE 1769 Query: 835 AQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDV 894 AQR+KLA EL T TLY+LDEPTTGLH AD+++L+DVL L G+T++VIEHN+D Sbjct: 1770 AQRIKLASELGNNRT-HTLYVLDEPTTGLHRADVKKLVDVLRALSAHGHTVLVIEHNMDF 1828 Query: 895 IKTADWIVDLGPEGGSGGGEILVSGTPET-VAECEASHTARFL 936 + AD+++D+GP G+ GG ++ G P +A+ E S TAR L Sbjct: 1829 VWAADYVIDIGPGSGAKGGRVVAKGAPAELLAQGERSATARAL 1871 Score = 901 bits (2330), Expect = 0.0, Method: Composition-based stats. Identities = 391/946 (41%), Positives = 550/946 (58%), Gaps = 38/946 (4%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 63 I +RG R HNLKNI+L +P +KLI V+GLSGSGKSSLA TLYAEGQRRYVE+ S YARQ Sbjct: 14 IRLRGVRQHNLKNIDLDLPLNKLIAVSGLSGSGKSSLALHTLYAEGQRRYVETFSPYARQ 73 Query: 64 FLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCPDH 123 FL M+ P+ D IEG+ P I+IE + + RSTVGTITEI+D+L+LL+AR+ CP+ Sbjct: 74 FLERMDPPEADLIEGIPPGIAIESGTAVRSSRSTVGTITEINDHLKLLYARLAVLHCPEC 133 Query: 124 DVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARIDGEV 183 D P+A T + ++ P+ R+++ P + + G+ + +L + G++R + G Sbjct: 134 DRPVARDTPESVYRSLQELPDRSRVLIAFPFLPDNSGDW---VRSLVASGFLRLYVGGRT 190 Query: 184 CDLSDP-PKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVADMDDPKA 242 +L + + + VVVDR +R+A+S TA G A V + D Sbjct: 191 VELEEIGDAASEYGRGEVLVVVDRLSWGSAARERVADSLATAFHAGNGHAAVVVLPDT-- 248 Query: 243 EELLFSANFACPIC--GYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPEL 300 FS++ +C C G S P LFSFN+P GACP C G G D D VI + L Sbjct: 249 -VKRFSSDLSCADCNPGLSFSPPTPNLFSFNSPLGACPECRGFGRTIGVDLDLVIPDRRL 307 Query: 301 SLAGGAIRGWDRRNFYYFQMLKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKENIEFKY 360 +L GAI+ + + L V+ P+ L + ++ G+ Sbjct: 308 TLRRGAIKPFGTDR-METEDLMRFCAGEGIPVDVPFEDLDEKDREKIINGTKD------- 359 Query: 361 MNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGTRLRREARH 420 + G+ E +T VR L+++ + C SC GTR R E Sbjct: 360 -------------YYGIKGYFEWLEGKTYKMHVRVFLSRYRAYTRCRSCAGTRYRPETLL 406 Query: 421 VYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTL 480 + + A+S SI EFF+ R AE ++KE+ RL+FL VGL YL+L Sbjct: 407 YRLHGETIGALSAWSIEKCAEFFSGGWPELARDPAAELLVKEVRSRLEFLRAVGLEYLSL 466 Query: 481 SRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNT 540 R + TLSGGE QR+ L +G+ +V V+YVLDEPS+GLH RD +RL+G L L D+GNT Sbjct: 467 DRQSRTLSGGEVQRVHLTRALGSAMVNVLYVLDEPSVGLHARDQKRLMGQLRRLVDIGNT 526 Query: 541 VIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKI-- 598 V+VVEHD D IR D V+D+GP G GGE+V G E + SLTG Y+SG+ ++ Sbjct: 527 VVVVEHDPDMIRFCDLVVDMGPEGGEKGGEIVYRGTPEGMKREKRSLTGGYLSGRLEVGC 586 Query: 599 EVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIA 658 E+ ++R P N ++ L GAR NNLK+VT+ P+G+ ++GVSGSGKSTL+ +L+ Sbjct: 587 ELRRRRRPENGRSLV-LRGARENNLKNVTVEFPLGILVGVSGVSGSGKSTLVEKSLYYNW 645 Query: 659 QRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGV 718 R++ G P ++G E ++V+ +DQ IGRTPR+N TY+ P+R+L A Sbjct: 646 LRKM-GRATEAPGALDAMEGAEWIEEVVLVDQQAIGRTPRANLLTYSRAIDPIRKLLAQT 704 Query: 719 PESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEI 778 PE+ ARGY FSFNV GGRCE C+G+G +VEM FL D+ + C QC G R+ E LE+ Sbjct: 705 PEAVARGYPASHFSFNVPGGRCELCKGEGFERVEMQFLADVLIRCPQCNGLRFKDEILEV 764 Query: 779 KYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRV 838 + +G +I ++L+ T E + F L + LQ + D+GL Y+RLGQ +TLSGGEAQR+ Sbjct: 765 RARGLSIGDMLEATARELMDRFADHEPLVKALQPIQDIGLGYLRLGQPLSTLSGGEAQRL 824 Query: 839 KLARELS----KRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDV 894 KL L+ L+ILDEPTTGLH D+Q+L+ VL +L D G++++V+EHNLD Sbjct: 825 KLVHFLAAGRPSSNGRHRLFILDEPTTGLHPHDLQKLVVVLRRLVDLGHSVLVVEHNLDF 884 Query: 895 IKTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLKPML 940 +K+ DW++DLGP GG GGE++ +G PE VA S T RFL+ L Sbjct: 885 LKSCDWLIDLGPGGGEHGGEVVATGPPEAVAAHPESCTGRFLREKL 930 Score = 225 bits (574), Expect = 7e-57, Method: Composition-based stats. Identities = 107/335 (31%), Positives = 168/335 (50%), Gaps = 36/335 (10%) Query: 406 CASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGD 465 C C G R + E V + + + + M+ F + + + Sbjct: 749 CPQCNGLRFKDEILEVRARGLSIGDMLEATARELMDRFADHEP--------------LVK 794 Query: 466 RLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVG-----VMYVLDEPSIGLH 520 L+ + ++GL YL L + TLSGGEAQR++L + AG +++LDEP+ GLH Sbjct: 795 ALQPIQDIGLGYLRLGQPLSTLSGGEAQRLKLVHFLAAGRPSSNGRHRLFILDEPTTGLH 854 Query: 521 QRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAI 580 D ++L+ L L DLG++V+VVEH+ D +++ D +ID+GPG G HGGEVVA GP EA+ Sbjct: 855 PHDLQKLVVVLRRLVDLGHSVLVVEHNLDFLKSCDWLIDLGPGGGEHGGEVVATGPPEAV 914 Query: 581 MAVPESLTGQYMSGKRKIEVPKKRVPA-----------NPEKVLKLTGARGNNLKDVTLT 629 A PES TG+++ K + + + A +P + + + GAR +NL+ + Sbjct: 915 AAHPESCTGRFLREKLEGALGARAEAAPFDPGEDGAAGSPSREIVIRGAREHNLQVDEIR 974 Query: 630 LPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAEPAPYRDIQGLEHFDKV---- 685 LP +TG+SGSGKS+L D LF QR+ A Y I +++ Sbjct: 975 LPRNEMIVLTGLSGSGKSSLAFDVLFAEGQRRYLECLSAYVRQYFKIMEKPDVEQILGLP 1034 Query: 686 --IDIDQSPIGRTPRSNPATYTGVFTPVRELFAGV 718 I I+Q RS AT T ++ +R L++ + Sbjct: 1035 PTIAIEQRTSRLNRRSTVATITEIYHFLRLLYSKL 1069 Score = 155 bits (392), Expect = 8e-36, Method: Composition-based stats. Identities = 68/194 (35%), Positives = 106/194 (54%), Gaps = 15/194 (7%) Query: 761 VPCDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAR---EFFDAVPA-----------L 806 V C +C G+R NR+ + +G I ++ + I + + F P + Sbjct: 1337 VVCPECGGRRLNRQARSVAVQGLGIGDLTSLAISDFLRKWKRFRFDPKDRPIVAPISREV 1396 Query: 807 ARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFA 866 A ++ L VGL Y+ L ++ TLSGGE QR++LA +L G Y+LDEPT GLH Sbjct: 1397 AERVSFLQKVGLDYLALDRAGDTLSGGETQRIRLAAQLGSNLRG-VCYVLDEPTIGLHPV 1455 Query: 867 DIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAE 926 D +LL+ L +L+++GNTI+V+EH+ D ++ AD +V+LGPE G GGG + G+ E + Sbjct: 1456 DNGRLLESLARLKEKGNTILVVEHDADTMRQADTLVELGPEAGRGGGRLTAQGSFEALCG 1515 Query: 927 CEASHTARFLKPML 940 + T + L Sbjct: 1516 DARTLTGAWFSRSL 1529 Score = 60.3 bits (145), Expect = 4e-07, Method: Composition-based stats. Identities = 36/125 (28%), Positives = 60/125 (48%), Gaps = 6/125 (4%) Query: 600 VPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQ 659 +PKK P E +++L G R +NLK++ L LP+ ++G+SGSGKS+L TL+ Q Sbjct: 1 MPKKSSPNGNEPLIRLRGVRQHNLKNIDLDLPLNKLIAVSGLSGSGKSSLALHTLYAEGQ 60 Query: 660 RQLNGATIAEPAPYR------DIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRE 713 R+ + + +E I I+ R+ RS T T + ++ Sbjct: 61 RRYVETFSPYARQFLERMDPPEADLIEGIPPGIAIESGTAVRSSRSTVGTITEINDHLKL 120 Query: 714 LFAGV 718 L+A + Sbjct: 121 LYARL 125 Score = 54.2 bits (129), Expect = 3e-05, Method: Composition-based stats. Identities = 35/125 (28%), Positives = 60/125 (48%), Gaps = 23/125 (18%) Query: 3 KIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYAR 62 + +RGAR +NLKN+ + P L+ V+G+SGSGKS+L +LY Sbjct: 599 SLVLRGARENNLKNVTVEFPLGILVGVSGVSGSGKSTLVEKSLY---------------Y 643 Query: 63 QFLSLMEKP-----DVDHIEG---LSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFAR 114 +L M + +D +EG + + ++Q++ PR+ + T + D +R L A+ Sbjct: 644 NWLRKMGRATEAPGALDAMEGAEWIEEVVLVDQQAIGRTPRANLLTYSRAIDPIRKLLAQ 703 Query: 115 VGEPR 119 E Sbjct: 704 TPEAV 708 >UniRef50_Q21RT9 UvrA family protein n=4 Tax=Bacteria RepID=Q21RT9_RHOFD Length = 2098 Score = 1007 bits (2603), Expect = 0.0, Method: Composition-based stats. Identities = 380/1047 (36%), Positives = 540/1047 (51%), Gaps = 125/1047 (11%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 63 I +RGAR HNLKN++L I +L VVTG SGSGKSSL FDTL+AEGQRRYVE+ SAYARQ Sbjct: 6 IRIRGARQHNLKNLDLDIRTGELTVVTGPSGSGKSSLVFDTLFAEGQRRYVETFSAYARQ 65 Query: 64 FLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCPDH 123 FL M+KP VD +EG+ PAI+I+Q + + RSTVGT+TE++D+L+LLFAR G Sbjct: 66 FLDRMDKPAVDKVEGVPPAIAIDQTNPVRSSRSTVGTMTELNDHLKLLFARAGALFDRVT 125 Query: 124 DVPLAAQTVSQMVDNVLSQPE--GKRLMLLAPIIKERKGEHTKTLENLASQGYIRARIDG 181 P+ + + +L + RL + P+ + + L+ G+ + + + Sbjct: 126 AQPVRHDSPETIYAQLLERSAQANTRLAITFPVELPASATPEEVAQWLSVSGFTKVQAER 185 Query: 182 EV----------CDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGT 231 ++ ++ ++VV DRF++ R+ E+ E AL+ G Sbjct: 186 DLEVEASPAVGHKKPGKAAPEPASRRKVLDVVADRFRLAHAERARVLEAIEVALKHGSGR 245 Query: 232 AVVADMDDPKA-----------------EELLFSANFACPICGYSMRELEPRLFSFNNPA 274 V +++P+A E FS CP + +FSFN+ Sbjct: 246 INVYVLNEPQAPDIQGSLATDSIVNSVPEIWRFSTGLHCPESNLRYTDPIASMFSFNSAV 305 Query: 275 GACPTCDGLGVQQYFDPDRVIQNPELSLAGGAIRGWDRRNFYYFQM-LKSLADHYKFDVE 333 GAC C G G D VI N +L+L GAI+ + Q L A+ + Sbjct: 306 GACDACRGFGRVIGVDYGLVIPNDKLTLRAGAIKPMQTPAWQEAQDDLMRHAEGAGIPRD 365 Query: 334 APWGSLSANVHKVVLYGSGKENIEFKYMNDRGDTSIRRHPFEGVLHNMERRYKETESSAV 393 PW L+ V+ GS N ++ + G+ E ++ + Sbjct: 366 TPWYKLTPEQQHWVIDGSPNWNGKW------------NQHWFGIRRFFEYLETKSYKMHI 413 Query: 394 REELAKFISNRPCASCEGTRLRREARHVYVE----------------------------- 424 R L+K+ S PC +C G RL+ E+ + Sbjct: 414 RVLLSKYRSYTPCPTCGGARLKTESLLWRMGSKADADKVLDPAKRFMPAGVKWSREQLEA 473 Query: 425 --NTPLPAISDMSIGHAMEFFNNLK------------------------LAGQRAKIAEK 458 L + + + FF++++ + AK + Sbjct: 474 LPGLCLHDLMLLPLDRVRRFFDSMQARLGVSERAAPETAGEPGLSVAVVTSEADAKTLKL 533 Query: 459 ILKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIG 518 + +EI RLK+L VG+ YLTL R + TLSGGE QRI L + +G LV ++VLDEPSIG Sbjct: 534 LFEEISTRLKYLCEVGIGYLTLDRQSRTLSGGEVQRINLTTALGTSLVNTLFVLDEPSIG 593 Query: 519 LHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLE 578 LH RD R++ + LRD GNT++VVEHD + AAD +ID+GPG G GG++V +G Sbjct: 594 LHPRDMHRIIVAMQRLRDAGNTLVVVEHDPAVMLAADRMIDMGPGPGERGGQIVFDGSTA 653 Query: 579 AIMAVPESLTGQYMSGKRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCI 638 + ++LTG Y+ G++++ + +R+ A L L GAR +NLK+V + P+ CI Sbjct: 654 D-LRHADTLTGAYLGGRKQVGLGFQRLVAANTPRLILEGAREHNLKNVGVEFPLQRLVCI 712 Query: 639 TGVSGSGKSTLINDTLFPIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPR 698 TGVSGSGKSTLI D L P +R G P + + G E V+ +DQSPIG+T R Sbjct: 713 TGVSGSGKSTLIQDILAPALKRHF-GKPSEAPGAFERLLGAEQLSDVVFVDQSPIGKTAR 771 Query: 699 SNPATYTGVFTPVRELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPD 758 SNP +Y G + +RE+FA P SR RGYT +FSFN GRC C G G VEM FL D Sbjct: 772 SNPVSYVGAWDAIREIFANAPLSRQRGYTASKFSFNNGDGRCATCGGSGFEHVEMQFLSD 831 Query: 759 IYVPCDQCKGKRYNRETLEIK---------------YKGKTIHEVLDMTIEEAREFFDAV 803 +Y+ C C GKRY E LEI + + +VL++T+ EA F+ Sbjct: 832 VYLRCPDCDGKRYRPEILEITIERPLRIKSAGPAPSVRHINVADVLNLTVSEAAMLFEHD 891 Query: 804 PALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKR-----------GTGQT 852 + R LQ ++DVGL Y++LGQ TLSGGEAQR+KLA L+ T Sbjct: 892 REVIRGLQPIIDVGLEYVKLGQPVPTLSGGEAQRLKLAGFLADAAKSASASRQAIARRGT 951 Query: 853 LYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADWIVDLGPEGGSGG 912 L++ DEPTTGLHF DI +L+ L KL D G++++VIEHNLDVI+ +DW++DLGPEGG G Sbjct: 952 LFMFDEPTTGLHFDDIAKLMRALRKLLDVGHSLIVIEHNLDVIRASDWLIDLGPEGGDAG 1011 Query: 913 GEILVSGTPETVAECEASHTARFLKPM 939 GE++ GTP+ V + ASHT + L+ Sbjct: 1012 GEVVAFGTPDDVRQHPASHTGKALRDY 1038 Score = 459 bits (1181), Expect = e-127, Method: Composition-based stats. Identities = 219/675 (32%), Positives = 321/675 (47%), Gaps = 110/675 (16%) Query: 2 DKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYA 61 + I++ AR HNLK++++ IPR K VVTG+SGSGKS+LAFD L+ EGQRRY+ESL+AYA Sbjct: 1093 NAIQIINAREHNLKSLSVNIPRGKFTVVTGVSGSGKSTLAFDILFNEGQRRYLESLNAYA 1152 Query: 62 RQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCP 121 R + +P+VD + G+ P ++IEQ+ + +STVGT TE+ +LRLLF ++G C Sbjct: 1153 RSIVQPAGRPEVDAVYGIPPTVAIEQRLSRGGRKSTVGTTTEVWHFLRLLFVKLGTQHCI 1212 Query: 122 DHDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARIDG 181 P+A QT + ++ G+ + LL+P++ RKG +T+ + +G+ R+DG Sbjct: 1213 HDGTPVAPQTPDSIAAQLMKNFRGQHIGLLSPLVMNRKGVYTELADWARPRGFTHLRVDG 1272 Query: 182 EVCDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVADMDDPK 241 + P+++ K+HTIE+ V V + L + AL G V Sbjct: 1273 NFLPTTAFPRIDRFKEHTIELPVASLDVLPEQEAALRAALAQALMHGKGVVHVLSNLSGL 1332 Query: 242 AEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPELS 301 +L P + FS ACP C DP Sbjct: 1333 RAAMLAGT----PTAQIG----TLQAFS---TLRACPVCS--TSYAELDPRLF------- 1372 Query: 302 LAGGAIRGWDRRNFYYFQMLKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKENIEFKYM 361 ++ ++ + L+ KV Sbjct: 1373 -------SYNSKHGWCPD-----CVGTGVR-------LTKEQRKVF-------------- 1399 Query: 362 NDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGTRLRREARHV 421 D S+ + +G E+ + E E + + C +C+GTRL AR V Sbjct: 1400 ----DDSVVDNDNKG----REQTFAEPEVED--------LVDAVCPACQGTRLNATARAV 1443 Query: 422 Y------------------VENTPLPAISDMSIGHAMEFFNNLK----LAGQRAKIAEKI 459 +E + ++ +S+ ++ L+ ++ + IA + Sbjct: 1444 KFGLQLASPATASIRARQAIEGVAITELARLSVTDLRQWVETLQTQGRMSQRETDIARDL 1503 Query: 460 LKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGL 519 + EI RL+FL VGL YLTL R A TLSGGEAQRIRLA+Q+G+ L GV YVLDEP+IGL Sbjct: 1504 VPEIKGRLEFLEQVGLGYLTLDRGAPTLSGGEAQRIRLAAQLGSNLQGVCYVLDEPTIGL 1563 Query: 520 HQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEA 579 H RDN+ LLG L L D GNT++VVEHDED IR ADH+IDIGP AG GG++VAEG + Sbjct: 1564 HPRDNQILLGALQSLSDQGNTLVVVEHDEDTIRYADHIIDIGPSAGKRGGQLVAEGSVAD 1623 Query: 580 IMAVPESLTGQYMSGKRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCIT 639 I ES TG+Y+ K + +R L DV + + G + Sbjct: 1624 IQGAAESQTGRYLLHAMKHPLKPRRPVLM--------------LADVGVGIGTGAVLAAS 1669 Query: 640 -----GVSGSGKSTL 649 G S +G ++L Sbjct: 1670 RAGSPGASDAGSTSL 1684 Score = 399 bits (1025), Expect = e-109, Method: Composition-based stats. Identities = 161/357 (45%), Positives = 221/357 (61%), Gaps = 22/357 (6%) Query: 605 VPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLF--------- 655 ++ L +T A +NL+ VT +P+ ITGVSGSGKSTL D L Sbjct: 1741 TTPEVQRWLTVTNATMHNLQHVTAQVPLSRLVAITGVSGSGKSTLARDVLLANVHTAVQK 1800 Query: 656 ---PIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVR 712 + L+ + G E D+V+++DQ+PIG+TPRS PATY G + +R Sbjct: 1801 RSTKAGRDALDAGEQISWTGCTSVTGFESVDRVLEVDQTPIGKTPRSCPATYIGFWDIIR 1860 Query: 713 ELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYN 772 +LFA E++ARGY RFSFN GRC C+G G+ + M FLPD+ V C+ CKG R+N Sbjct: 1861 KLFADTLEAKARGYAANRFSFNTGEGRCAGCEGQGIRTIAMSFLPDVKVLCETCKGARFN 1920 Query: 773 RETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSG 832 ETL + ++GK I +VL M ++EA +FF A+P ++ LQ L DVGL Y+ LGQ + TLSG Sbjct: 1921 PETLAVTWRGKNIGDVLQMEVDEAVQFFAAMPNISHPLQLLKDVGLGYLTLGQPSPTLSG 1980 Query: 833 GEAQRVKLARELSK---------RGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGN 883 GEAQR+KL ELSK + TLY+LDEPT GLH AD+++L+ VLH+L D G+ Sbjct: 1981 GEAQRLKLVTELSKVRDDITRRGQKAPHTLYVLDEPTVGLHMADVEKLIKVLHRLVDGGH 2040 Query: 884 TIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLKPML 940 ++VVIEH+LDVI ADW++DLGP+GG+ GG ++ + TPE V + T L +L Sbjct: 2041 SVVVIEHDLDVIAEADWVIDLGPDGGNAGGRVVAATTPEGVVTL-GTPTGVALAAVL 2096 Score = 219 bits (558), Expect = 5e-55, Method: Composition-based stats. Identities = 105/374 (28%), Positives = 161/374 (43%), Gaps = 58/374 (15%) Query: 403 NRPCASCEGTRLRREARHVYVE-NTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILK 461 C C+G R R E + +E + + + + L L A + + + Sbjct: 833 YLRCPDCDGKRYRPEILEITIERPLRIKSAGPAPSVRHINVADVLNLTVSEAAMLFEHDR 892 Query: 462 EIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGA------------GLVGVM 509 E+ L+ +++VGL Y+ L + TLSGGEAQR++LA + G + Sbjct: 893 EVIRGLQPIIDVGLEYVKLGQPVPTLSGGEAQRLKLAGFLADAAKSASASRQAIARRGTL 952 Query: 510 YVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGG 569 ++ DEP+ GLH D +L+ L L D+G+++IV+EH+ D IRA+D +ID+GP G GG Sbjct: 953 FMFDEPTTGLHFDDIAKLMRALRKLLDVGHSLIVIEHNLDVIRASDWLIDLGPEGGDAGG 1012 Query: 570 EVVAEGPLEAIMAVPESLTGQYMSGKRKI------------------------------- 598 EVVA G + + P S TG+ + Sbjct: 1013 EVVAFGTPDDVRQHPASHTGKALRDYATAMGGVHGVNEFTAPYLVHATAAGVTPGASDAG 1072 Query: 599 --------EVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLI 650 E +++ AR +NLK +++ +P G FT +TGVSGSGKSTL Sbjct: 1073 STSLPGATPAAADHGVHAAENAIQIINAREHNLKSLSVNIPRGKFTVVTGVSGSGKSTLA 1132 Query: 651 NDTLFPIAQRQLNGATIAEPAPYRDIQGLEHFDKV------IDIDQSPIGRTPRSNPATY 704 D LF QR+ + A G D V + I+Q +S T Sbjct: 1133 FDILFNEGQRRYLESLNAYARSIVQPAGRPEVDAVYGIPPTVAIEQRLSRGGRKSTVGTT 1192 Query: 705 TGVFTPVRELFAGV 718 T V+ +R LF + Sbjct: 1193 TEVWHFLRLLFVKL 1206 Score = 187 bits (475), Expect = 2e-45, Method: Composition-based stats. Identities = 86/271 (31%), Positives = 122/271 (45%), Gaps = 61/271 (22%) Query: 726 YTPGRFSFNVRGGRCEACQGDGV--IKVEMHFLPD----------------------IYV 761 P FS+N + G C C G GV K + D + Sbjct: 1367 LDPRLFSYNSKHGWCPDCVGTGVRLTKEQRKVFDDSVVDNDNKGREQTFAEPEVEDLVDA 1426 Query: 762 PCDQCKGKRYNRETLEIKY------------------KGKTIHEVLDMTIEEAREFF--- 800 C C+G R N +K+ +G I E+ +++ + R++ Sbjct: 1427 VCPACQGTRLNATARAVKFGLQLASPATASIRARQAIEGVAITELARLSVTDLRQWVETL 1486 Query: 801 ---------------DAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELS 845 D VP + +L+ L VGL Y+ L + A TLSGGEAQR++LA +L Sbjct: 1487 QTQGRMSQRETDIARDLVPEIKGRLEFLEQVGLGYLTLDRGAPTLSGGEAQRIRLAAQLG 1546 Query: 846 KRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADWIVDLG 905 G Y+LDEPT GLH D Q LL L L DQGNT+VV+EH+ D I+ AD I+D+G Sbjct: 1547 SNLQG-VCYVLDEPTIGLHPRDNQILLGALQSLSDQGNTLVVVEHDEDTIRYADHIIDIG 1605 Query: 906 PEGGSGGGEILVSGTPETVAECEASHTARFL 936 P G GG+++ G+ + S T R+L Sbjct: 1606 PSAGKRGGQLVAEGSVADIQGAAESQTGRYL 1636 Score = 177 bits (449), Expect = 2e-42, Method: Composition-based stats. Identities = 78/279 (27%), Positives = 120/279 (43%), Gaps = 52/279 (18%) Query: 353 KENIEFKYMNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELA-KF----------- 400 +E + G + + + +T + R A +F Sbjct: 1831 DRVLEVDQTPIGKTPRSCPATYIGFWDIIRKLFADTLEAKARGYAANRFSFNTGEGRCAG 1890 Query: 401 ----------ISNRP-----CASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNN 445 +S P C +C+G R E V + + M + A++FF Sbjct: 1891 CEGQGIRTIAMSFLPDVKVLCETCKGARFNPETLAVTWRGKNIGDVLQMEVDEAVQFF-- 1948 Query: 446 LKLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQI---- 501 + I L+ L +VGL YLTL + + TLSGGEAQR++L +++ Sbjct: 1949 ------------AAMPNISHPLQLLKDVGLGYLTLGQPSPTLSGGEAQRLKLVTELSKVR 1996 Query: 502 ------GAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAAD 555 G +YVLDEP++GLH D E+L+ L L D G++V+V+EHD D I AD Sbjct: 1997 DDITRRGQKAPHTLYVLDEPTVGLHMADVEKLIKVLHRLVDGGHSVVVIEHDLDVIAEAD 2056 Query: 556 HVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSG 594 VID+GP G GG VVA E ++ + + TG ++ Sbjct: 2057 WVIDLGPDGGNAGGRVVAATTPEGVVTL-GTPTGVALAA 2094 Score = 103 bits (257), Expect = 4e-20, Method: Composition-based stats. Identities = 42/116 (36%), Positives = 61/116 (52%), Gaps = 6/116 (5%) Query: 609 PEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIA 668 P+ ++++ GAR +NLK++ L + G T +TG SGSGKS+L+ DTLF QR+ A Sbjct: 2 PQGIIRIRGARQHNLKNLDLDIRTGELTVVTGPSGSGKSSLVFDTLFAEGQRRYVETFSA 61 Query: 669 EPAPYRDIQGLEHFDKV------IDIDQSPIGRTPRSNPATYTGVFTPVRELFAGV 718 + D DKV I IDQ+ R+ RS T T + ++ LFA Sbjct: 62 YARQFLDRMDKPAVDKVEGVPPAIAIDQTNPVRSSRSTVGTMTELNDHLKLLFARA 117 Score = 90.4 bits (223), Expect = 3e-16, Method: Composition-based stats. Identities = 35/116 (30%), Positives = 55/116 (47%), Gaps = 13/116 (11%) Query: 3 KIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRY---VESLSA 59 ++ + GAR HNLKN+ + P +L+ +TG+SGSGKS+L D L +R + E+ A Sbjct: 686 RLILEGAREHNLKNVGVEFPLQRLVCITGVSGSGKSTLIQDILAPALKRHFGKPSEAPGA 745 Query: 60 YARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARV 115 + R E LS + ++Q RS + D +R +FA Sbjct: 746 FERLL----------GAEQLSDVVFVDQSPIGKTARSNPVSYVGAWDAIREIFANA 791 Score = 82.3 bits (202), Expect = 9e-14, Method: Composition-based stats. Identities = 35/116 (30%), Positives = 53/116 (45%), Gaps = 6/116 (5%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 63 + V A HNL+++ +P +L+ +TG+SGSGKS+LA D L A + + R Sbjct: 1749 LTVTNATMHNLQHVTAQVPLSRLVAITGVSGSGKSTLARDVLLANVHTAVQKRSTKAGRD 1808 Query: 64 FLSLMEK------PDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFA 113 L E+ V E + + ++Q PRS T D +R LFA Sbjct: 1809 ALDAGEQISWTGCTSVTGFESVDRVLEVDQTPIGKTPRSCPATYIGFWDIIRKLFA 1864 >UniRef50_Q124L1 UvrA family protein n=23 Tax=cellular organisms RepID=Q124L1_POLSJ Length = 2024 Score = 995 bits (2573), Expect = 0.0, Method: Composition-based stats. Identities = 388/1045 (37%), Positives = 545/1045 (52%), Gaps = 129/1045 (12%) Query: 3 KIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYAR 62 I +RGAR HNLKN++L I +L VVTG SGSGKSSL FDTL+AEGQRRYVE+ SAYAR Sbjct: 15 TIRIRGARQHNLKNLDLDIRTGELTVVTGPSGSGKSSLVFDTLFAEGQRRYVETFSAYAR 74 Query: 63 QFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCPD 122 QFL M+KP VD +EG+ PAI+I+Q + + RSTVGT+TE++D+L+LL+AR + Sbjct: 75 QFLDRMDKPAVDKVEGVPPAIAIDQSNPVRSSRSTVGTMTELNDHLKLLYARSAQLFDKQ 134 Query: 123 HDVPLAAQTVSQMVDNVLSQPE------------------------------------GK 146 + + + ++++ G Sbjct: 135 TAQLVRHDSPESIYAGLMARTAAVEQAQLSAAPPQRELAPLHDERGSATPEAREATSVGV 194 Query: 147 RLMLLAPIIKERKGEHTKTLENLASQGYIRARIDGEVCDLSDPPKLELQKKHTIEVVVDR 206 RL++ P+ + + L++ G+ R + ++ + P KL ++VV DR Sbjct: 195 RLVMTFPVELPGNTSAEEVTQWLSASGFTRVHAERQISTPAGPHKL-------LDVVADR 247 Query: 207 FKVRDDLTQRLAESFETALELSGGTAVVADMDDPKA--------EELLFSANFACPICGY 258 F+++ R E+ E AL+ GG V M A E FS CP Sbjct: 248 FRIQTTEKVRAIEAIEMALKRGGGRLNVYVMGAGPASPSSATPEEMWRFSTGLHCPDSDT 307 Query: 259 SMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPELSLAGGAIRGWDRRNFYYF 318 + P LFSFN+ GAC TC G G D VI N +L+L GAI+ + Sbjct: 308 RYTDPTPSLFSFNSAMGACETCRGFGRVIGVDYGLVIPNDKLTLRAGAIKVMQTPAWQEA 367 Query: 319 Q-MLKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKENIEFKYMNDRGDTSIRRHPFEGV 377 Q L A+ + PW L+ V+ GS N ++ + G+ Sbjct: 368 QDDLMRHAETAGIPRDTPWYKLTPEQQAWVINGSPSWNGKW------------NQHWFGI 415 Query: 378 LHNMERRYKETESSAVREELAKFISNRPCASCEGTRLRREARHVYVE------------- 424 + +R L+K+ S C +C G RL+ E+ + Sbjct: 416 KRFFAYLESKAYKMHIRVLLSKYRSYTQCETCGGARLKLESLLWRLGSKEAADAVLPPGQ 475 Query: 425 ------------------NTPLPAISDMSIGHAMEFFNNLKLAGQ----RAKIAEKILKE 462 L + + I +FF +L LA + K + + +E Sbjct: 476 RFMPVGVQWSRQQLEALPGLCLHDLMRLPIDRLQKFFASLSLAAEGDDAEQKALKLLFEE 535 Query: 463 IGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQR 522 I R+K+L +VG+ YLTL R + TLSGGE QRI L + +G LV ++VLDEPSIGLH R Sbjct: 536 IQTRVKYLCDVGIGYLTLDRQSRTLSGGEVQRINLTTALGTSLVNTLFVLDEPSIGLHPR 595 Query: 523 DNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMA 582 D R+ + LRD GNT++VVEHD + AAD +ID+GPG G GG++V +G E + Sbjct: 596 DMNRITQAMHRLRDAGNTLVVVEHDPAVMLAADRMIDMGPGPGEKGGQIVFDGTPED-LR 654 Query: 583 VPESLTGQYMSGKRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVS 642 ++LTG Y+ ++++ + KR ++ L L GAR +NLK++T+ P+ C+TGVS Sbjct: 655 HADTLTGAYLGSRKRVGLGLKRAVSDNTPRLILEGARDHNLKNLTVEFPLQRLVCVTGVS 714 Query: 643 GSGKSTLINDTLFPIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPA 702 GSGKSTL+ D L P RQ G P + + G +H V+ +DQSPIG+T RSNPA Sbjct: 715 GSGKSTLMQDILAPALLRQF-GKATETPGLHDRLMGADHLTDVVFVDQSPIGKTARSNPA 773 Query: 703 TYTGVFTPVRELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVP 762 +Y G + VRELFA P +R R YT +FSFN GRC C G G VEM FL D+Y+ Sbjct: 774 SYVGAWDAVRELFAQSPLARQRSYTATKFSFNNGDGRCPTCGGSGFEHVEMQFLSDVYLR 833 Query: 763 CDQCKGKRYNRETLEIKYKGK----------TIHEVLDMTIEEAREFFDAVPALARKLQT 812 C C GKRY E LE+ + K + +VL++T+ EA + F + R LQ Sbjct: 834 CPDCDGKRYRPEILEVTIERKAIGQLKPVLMNVSDVLELTVSEAVQLFAQDREVLRALQP 893 Query: 813 LMDVGLTYIRLGQSATTLSGGEAQRVKLARELS------------------KRGTGQTLY 854 ++DVGL Y++LGQ TLSGGEAQR+KLA L+ K TL+ Sbjct: 894 IVDVGLEYVKLGQPVPTLSGGEAQRLKLAGFLAEASRTASKSSASKQALALKHPGRGTLF 953 Query: 855 ILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGE 914 + DEPTTGLHF DI +L+ L KL D G++++VIEHNLDVI++ADW++DLGPEGG GGG Sbjct: 954 LFDEPTTGLHFDDIAKLMRALRKLMDAGHSLIVIEHNLDVIRSADWLIDLGPEGGEGGGL 1013 Query: 915 ILVSGTPETVAECEASHTARFLKPM 939 ++ GTPE V + SHTA+ L+ Sbjct: 1014 LVAQGTPEEVRQHPTSHTAKALREY 1038 Score = 489 bits (1258), Expect = e-136, Method: Composition-based stats. Identities = 223/609 (36%), Positives = 317/609 (52%), Gaps = 71/609 (11%) Query: 2 DKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYA 61 + I++ A+ +NLK++++ IPR K VVTG+SGSGKS+LAFD L+ EGQRRY+ESL+AYA Sbjct: 1064 NLIQIVNAKENNLKSLSVDIPRGKFNVVTGVSGSGKSTLAFDILFNEGQRRYLESLNAYA 1123 Query: 62 RQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCP 121 R + +P+VD + G+ P ++IEQ+ + +STVGT TE+ +LRLL+ ++G C Sbjct: 1124 RSIVQPAGRPEVDAVYGIPPTVAIEQRLSRGGRKSTVGTTTEVWHFLRLLYVKLGVQHCT 1183 Query: 122 DHDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARIDG 181 + Q+ + +L G+ + LLAP++ RKG +T+ + +GY RIDG Sbjct: 1184 KDGAAVMPQSPESIAAQLLKTYRGQHIGLLAPLVIARKGVYTELADWARPRGYTHLRIDG 1243 Query: 182 EVCDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTA-VVADMDDP 240 E + P+++ K+HT+E+ V V + L + TALE G V+A +D Sbjct: 1244 EFLPTTGFPRIDRFKEHTVELPVADIHVTPENEAALRVALATALEHGKGVVHVLAPLDGL 1303 Query: 241 KAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPEL 300 + + ++ GLG + F R Sbjct: 1304 RGAMMAGAST------------------------------KGLGRLEAFSTKRACPVCST 1333 Query: 301 SLAGGAIRGWDRRNFYYFQMLKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKENIEFKY 360 S D R F Y D V LS KV Sbjct: 1334 SYPE-----LDPRLFSYNSKHGWCPDCVGTGV-----KLSKEQRKVF------------- 1370 Query: 361 MNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGTRLRREARH 420 D S+R +G E+ + E E + + C +CEGTRL ++AR Sbjct: 1371 -----DDSVRDDDNKG----REQTFGEPEVDD--------VVDAACPTCEGTRLNKQARA 1413 Query: 421 VYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTL 480 V + I+ +S+ + L LAG+ A IA ++ EI RL+FL +VGL YLTL Sbjct: 1414 VKFAGVGIADIAGLSVTDVRRWVEKLALAGREAGIARDLVPEIKSRLEFLEDVGLGYLTL 1473 Query: 481 SRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNT 540 R A TLSGGEAQRIRLA+Q+G+ L GV YVLDEP+IGLH RDN+ LL L L D GNT Sbjct: 1474 DRGAPTLSGGEAQRIRLAAQLGSNLQGVCYVLDEPTIGLHPRDNQILLSALGKLSDRGNT 1533 Query: 541 VIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEV 600 ++VVEHDED IR AD++IDIGPGAG GG++VA+G + AVPESLTG+Y++ + Sbjct: 1534 LVVVEHDEDTIRRADNIIDIGPGAGKRGGQLVAQGTAAQLSAVPESLTGRYLAHPLIHPL 1593 Query: 601 PKKRVPANP 609 +R P Sbjct: 1594 HARRETEKP 1602 Score = 404 bits (1039), Expect = e-111, Method: Composition-based stats. Identities = 159/352 (45%), Positives = 222/352 (63%), Gaps = 22/352 (6%) Query: 610 EKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLF------------PI 657 L + A +NLK V++ +P+ +TGVSGSGKSTL D L Sbjct: 1671 TSWLTVVNAGLHNLKSVSVDVPLYRLVAVTGVSGSGKSTLARDVLLTNVHAGVMLRSTKA 1730 Query: 658 AQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAG 717 + + + A I+G D+V+++DQ+PIG+TPRS PATY G + +R+LFA Sbjct: 1731 GRDADDKGKTPDWAGCERIEGYAAVDRVLEVDQTPIGKTPRSCPATYIGFWDTIRKLFAD 1790 Query: 718 VPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLE 777 E+RARGY GRFSFN GRC C+G GV + M FLPD+ V C+ C G R+N ET Sbjct: 1791 TLEARARGYGAGRFSFNTGEGRCPTCEGAGVRTIGMSFLPDVKVLCETCHGARFNPETQA 1850 Query: 778 IKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQR 837 + ++GK+I +VL M ++EA FF ++P++A LQ L DVGL Y+ LGQ + TLSGGEAQR Sbjct: 1851 VTWRGKSIGDVLKMEVDEAVAFFASMPSIAHPLQLLKDVGLGYLTLGQPSPTLSGGEAQR 1910 Query: 838 VKLARELSK---------RGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVI 888 +KL ELSK + TLY+LDEPT GLH AD+++L+ VLH+L + G+++VVI Sbjct: 1911 IKLVTELSKVRDDITRRGQKAPHTLYVLDEPTVGLHMADVEKLIHVLHRLVNGGHSVVVI 1970 Query: 889 EHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLKPML 940 EH+LDV+ ADW++DLGP+GG GG+++ S PE V + +HT L+ +L Sbjct: 1971 EHDLDVVAEADWVIDLGPDGGDAGGQVVASAPPEAVVKL-GTHTGNALQSVL 2021 Score = 221 bits (564), Expect = 9e-56, Method: Composition-based stats. Identities = 104/353 (29%), Positives = 164/353 (46%), Gaps = 43/353 (12%) Query: 403 NRPCASCEGTRLRREARHVYVENTPLPAI--SDMSIGHAMEFFNNLKLAGQRAKIAEKIL 460 C C+G R R E V +E + + M++ +E L ++ A+ Sbjct: 831 YLRCPDCDGKRYRPEILEVTIERKAIGQLKPVLMNVSDVLE----LTVSEAVQLFAQD-- 884 Query: 461 KEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLV-------------- 506 +E+ L+ +V+VGL Y+ L + TLSGGEAQR++LA + Sbjct: 885 REVLRALQPIVDVGLEYVKLGQPVPTLSGGEAQRLKLAGFLAEASRTASKSSASKQALAL 944 Query: 507 -----GVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIG 561 G +++ DEP+ GLH D +L+ L L D G+++IV+EH+ D IR+AD +ID+G Sbjct: 945 KHPGRGTLFLFDEPTTGLHFDDIAKLMRALRKLMDAGHSLIVIEHNLDVIRSADWLIDLG 1004 Query: 562 PGAGVHGGEVVAEGPLEAIMAVPESLTGQYM----------SGKRKIEVPKKRVPANPEK 611 P G GG +VA+G E + P S T + + G ++ Sbjct: 1005 PEGGEGGGLLVAQGTPEEVRQHPTSHTAKALREYELAMGQVHGVEEVRPKAWTTRPAFSN 1064 Query: 612 VLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAEPA 671 ++++ A+ NNLK +++ +P G F +TGVSGSGKSTL D LF QR+ + A Sbjct: 1065 LIQIVNAKENNLKSLSVDIPRGKFNVVTGVSGSGKSTLAFDILFNEGQRRYLESLNAYAR 1124 Query: 672 PYRDIQGLEHFDKV------IDIDQSPIGRTPRSNPATYTGVFTPVRELFAGV 718 G D V + I+Q +S T T V+ +R L+ + Sbjct: 1125 SIVQPAGRPEVDAVYGIPPTVAIEQRLSRGGRKSTVGTTTEVWHFLRLLYVKL 1177 Score = 204 bits (519), Expect = 2e-50, Method: Composition-based stats. Identities = 85/253 (33%), Positives = 127/253 (50%), Gaps = 39/253 (15%) Query: 726 YTPGRFSFNVRGGRCEACQGDGV-------------IKVEMH-----------FLPDIYV 761 P FS+N + G C C G GV ++ + + + Sbjct: 1338 LDPRLFSYNSKHGWCPDCVGTGVKLSKEQRKVFDDSVRDDDNKGREQTFGEPEVDDVVDA 1397 Query: 762 PCDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDA--------------VPALA 807 C C+G R N++ +K+ G I ++ +++ + R + + VP + Sbjct: 1398 ACPTCEGTRLNKQARAVKFAGVGIADIAGLSVTDVRRWVEKLALAGREAGIARDLVPEIK 1457 Query: 808 RKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFAD 867 +L+ L DVGL Y+ L + A TLSGGEAQR++LA +L G Y+LDEPT GLH D Sbjct: 1458 SRLEFLEDVGLGYLTLDRGAPTLSGGEAQRIRLAAQLGSNLQG-VCYVLDEPTIGLHPRD 1516 Query: 868 IQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAEC 927 Q LL L KL D+GNT+VV+EH+ D I+ AD I+D+GP G GG+++ GT ++ Sbjct: 1517 NQILLSALGKLSDRGNTLVVVEHDEDTIRRADNIIDIGPGAGKRGGQLVAQGTAAQLSAV 1576 Query: 928 EASHTARFLKPML 940 S T R+L L Sbjct: 1577 PESLTGRYLAHPL 1589 Score = 176 bits (446), Expect = 4e-42, Method: Composition-based stats. Identities = 79/282 (28%), Positives = 123/282 (43%), Gaps = 52/282 (18%) Query: 349 YGSGKENIEFKYMNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREE-LAKF------- 400 Y + +E + G + + + +T + R +F Sbjct: 1752 YAAVDRVLEVDQTPIGKTPRSCPATYIGFWDTIRKLFADTLEARARGYGAGRFSFNTGEG 1811 Query: 401 --------------ISNRP-----CASCEGTRLRREARHVYVENTPLPAISDMSIGHAME 441 +S P C +C G R E + V + + M + A+ Sbjct: 1812 RCPTCEGAGVRTIGMSFLPDVKVLCETCHGARFNPETQAVTWRGKSIGDVLKMEVDEAVA 1871 Query: 442 FFNNLKLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQI 501 FF ++ I L+ L +VGL YLTL + + TLSGGEAQRI+L +++ Sbjct: 1872 FFASMP--------------SIAHPLQLLKDVGLGYLTLGQPSPTLSGGEAQRIKLVTEL 1917 Query: 502 ----------GAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAI 551 G +YVLDEP++GLH D E+L+ L L + G++V+V+EHD D + Sbjct: 1918 SKVRDDITRRGQKAPHTLYVLDEPTVGLHMADVEKLIHVLHRLVNGGHSVVVIEHDLDVV 1977 Query: 552 RAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMS 593 AD VID+GP G GG+VVA P EA++ + + TG + Sbjct: 1978 AEADWVIDLGPDGGDAGGQVVASAPPEAVVKL-GTHTGNALQ 2018 Score = 104 bits (260), Expect = 2e-20, Method: Composition-based stats. Identities = 43/124 (34%), Positives = 64/124 (51%), Gaps = 6/124 (4%) Query: 603 KRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQL 662 ++ PA + +++ GAR +NLK++ L + G T +TG SGSGKS+L+ DTLF QR+ Sbjct: 6 RKDPAMSQGTIRIRGARQHNLKNLDLDIRTGELTVVTGPSGSGKSSLVFDTLFAEGQRRY 65 Query: 663 NGATIAEPAPYRDIQGLEHFDKV------IDIDQSPIGRTPRSNPATYTGVFTPVRELFA 716 A + D DKV I IDQS R+ RS T T + ++ L+A Sbjct: 66 VETFSAYARQFLDRMDKPAVDKVEGVPPAIAIDQSNPVRSSRSTVGTMTELNDHLKLLYA 125 Query: 717 GVPE 720 + Sbjct: 126 RSAQ 129 Score = 88.1 bits (217), Expect = 2e-15, Method: Composition-based stats. Identities = 42/144 (29%), Positives = 62/144 (43%), Gaps = 23/144 (15%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 63 + V A HNLK++++ +P +L+ VTG+SGSGKS+LA D L + + R Sbjct: 1674 LTVVNAGLHNLKSVSVDVPLYRLVAVTGVSGSGKSTLARDVLLTNVHAGVMLRSTKAGRD 1733 Query: 64 FLSLMEKPD---VDHIEGLSPA---ISIEQKSTSHNPRSTVGTITEIHDYLRLLFA---- 113 + PD + IEG + + ++Q PRS T D +R LFA Sbjct: 1734 ADDKGKTPDWAGCERIEGYAAVDRVLEVDQTPIGKTPRSCPATYIGFWDTIRKLFADTLE 1793 Query: 114 -------------RVGEPRCPDHD 124 GE RCP + Sbjct: 1794 ARARGYGAGRFSFNTGEGRCPTCE 1817 >UniRef50_B5YG61 Excinuclease ABC, A subunit n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YG61_THEYD Length = 915 Score = 994 bits (2570), Expect = 0.0, Method: Composition-based stats. Identities = 373/948 (39%), Positives = 562/948 (59%), Gaps = 51/948 (5%) Query: 2 DKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYA 61 D + ++GAR +NLKNI+++IP +KL V+TG+SGSGKSSLAFDT+YAEGQ R++E +S+YA Sbjct: 8 DYLIIKGARQNNLKNIDVIIPHNKLTVITGISGSGKSSLAFDTIYAEGQWRFIECMSSYA 67 Query: 62 RQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCP 121 R F+ + +PDVD I+ L P I++EQ++ R+TVGT TEI+DYLR++F++V +P CP Sbjct: 68 RVFIEKLPRPDVDLIDNLRPTIALEQRNPIKGSRATVGTHTEIYDYLRIIFSKVAKPVCP 127 Query: 122 DHDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARIDG 181 + + + S++ +L + GKR ++ E ++ E L G+ R I Sbjct: 128 KCNEEIKSWNSSKLTQELLEKYAGKRAFIVF--------ETDESKEKLIQLGFSRVLI-- 177 Query: 182 EVCDLSDPP--KLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVADMDD 239 + ++P +L + V+VDR + RL +S E A + G + ++D Sbjct: 178 --FENNNPIVKELTKSDEKLKMVIVDRLVLS--NASRLNDSLEIAFRM--GQVKIYIVED 231 Query: 240 PKAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPE 299 A L F + CP CG E P LFSFN+P GACP C G G +D ++ + E Sbjct: 232 --ANLLHFFSEPICPYCGMKTSEPSPLLFSFNHPHGACPQCKGFGYLLKYDESIIVPDKE 289 Query: 300 LSLAGGAIRGWDRRNF-YYFQMLKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKENIEF 358 LSLA GAI W++ ++ Q L A +V P+ LS ++ G Sbjct: 290 LSLAEGAIEIWEKPTLKWWKQQLLKGAKLSGINVNIPYRMLSQEQKNLIFTG-------- 341 Query: 359 KYMNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGTRLRREA 418 F GV +E K+ VR L++ C C+G RL+ A Sbjct: 342 ------------NQYFYGVNDFLEELEKKRYKVHVRVFLSRIRKPVVCPHCKGKRLKDTA 389 Query: 419 RHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNVGLNYL 478 + + I+ MSI E+ +LKL+ + AKI+E+ L++I ++L+FL VGL+YL Sbjct: 390 LMFKINGLDIGDINFMSISQLKEWIQSLKLSQEEAKISEEPLRQISEKLEFLERVGLSYL 449 Query: 479 TLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLG 538 TL R +TLSGGE QR+ +++Q+ L +YVLDEP++GLH +D +R++ L L + G Sbjct: 450 TLDRQIKTLSGGEYQRLNISNQLSNRLTATLYVLDEPTVGLHPKDTDRIIAVLKDLTEYG 509 Query: 539 NTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKI 598 NTV+VVEHD+D I+ AD +I++GPG G GGEVV G L+ + + +++T Y+ + Sbjct: 510 NTVVVVEHDKDVIKNADWLIELGPGGGSLGGEVVYSGELKKFLNL-DTVTANYLKKSECL 568 Query: 599 EVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIA 658 + K + + L A G+NLK++T+ P+ T +TG+SGSGKS+L+ DT + Sbjct: 569 AI--KNYKNLFKNFITLKNAHGHNLKNITVHFPMNALTVVTGISGSGKSSLVVDTFYKAV 626 Query: 659 QRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGV 718 QL G + + DI+G+++ + IDQSPIGRTP+S P TY G++ +R++FA Sbjct: 627 ANQL-GIDTQKALAFEDIEGVKNIKAIKLIDQSPIGRTPKSMPVTYLGLYGKIRDIFASQ 685 Query: 719 PESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEI 778 E++ RG++ G FS N G C C+G+G I+V+M F D+++PC+ C+GKR+ +E LE+ Sbjct: 686 KEAKLRGFSSGAFSVNSPQGYCPQCKGEGYIRVQMFFFEDLFLPCEDCEGKRFRKEVLEV 745 Query: 779 KYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRV 838 KYK K IHEVL M+ +EA EFF L K+ + ++GL Y+RLGQ ATTLSGGEAQR+ Sbjct: 746 KYKDKNIHEVLSMSFDEAYEFFYEDNILREKINLIRELGLGYLRLGQPATTLSGGEAQRI 805 Query: 839 KLARELSKRGTGQT------LYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNL 892 K+ E+ TG+ +YILDEPT GLH+ DI++ L+++ +L D+ T+++IEHNL Sbjct: 806 KICEEILSSITGKKSTLKGVVYILDEPTVGLHYEDIKKFLNIVKRLLDKSATVIIIEHNL 865 Query: 893 DVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLKPML 940 VI A WI+DLGPEGG GG +L G + E S+TA++L+ L Sbjct: 866 QVISEAQWIIDLGPEGGDKGGHLLYEGDLTEFLKLENSYTAKYLREYL 913 Score = 176 bits (446), Expect = 5e-42, Method: Composition-based stats. Identities = 81/336 (24%), Positives = 141/336 (41%), Gaps = 54/336 (16%) Query: 296 QNPELSLAGGAIRGWDRRNFYYFQMLKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKEN 355 L++ G I G + + K++A+ D + +L+ + V + Sbjct: 599 PMNALTVVTG-ISGSGKSSLVVDTFYKAVANQLGIDTQ---KALAFEDIEGVKNIKAIKL 654 Query: 356 IEFKYMNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAK---------------- 399 I+ + + + G+ + + + + +R + Sbjct: 655 IDQSPIGRTPKSMP--VTYLGLYGKIRDIFASQKEAKLRGFSSGAFSVNSPQGYCPQCKG 712 Query: 400 --FISNR---------PCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKL 448 +I + PC CEG R R+E V ++ + + MS A EFF + Sbjct: 713 EGYIRVQMFFFEDLFLPCEDCEGKRFRKEVLEVKYKDKNIHEVLSMSFDEAYEFFYEDNI 772 Query: 449 AGQRAKIAEKILKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAG---- 504 + +++ + +GL YL L + A TLSGGEAQRI++ +I + Sbjct: 773 --------------LREKINLIRELGLGYLRLGQPATTLSGGEAQRIKICEEILSSITGK 818 Query: 505 ---LVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIG 561 L GV+Y+LDEP++GLH D ++ L + L D TVI++EH+ I A +ID+G Sbjct: 819 KSTLKGVVYILDEPTVGLHYEDIKKFLNIVKRLLDKSATVIIIEHNLQVISEAQWIIDLG 878 Query: 562 PGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRK 597 P G GG ++ EG L + + S T +Y+ K Sbjct: 879 PEGGDKGGHLLYEGDLTEFLKLENSYTAKYLREYLK 914 Score = 84.6 bits (208), Expect = 2e-14, Method: Composition-based stats. Identities = 35/118 (29%), Positives = 60/118 (50%), Gaps = 6/118 (5%) Query: 607 ANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQL---- 662 + E L + GAR NNLK++ + +P T ITG+SGSGKS+L DT++ Q + Sbjct: 4 SRKEDYLIIKGARQNNLKNIDVIIPHNKLTVITGISGSGKSSLAFDTIYAEGQWRFIECM 63 Query: 663 --NGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGV 718 E P D+ +++ I ++Q + R+ T+T ++ +R +F+ V Sbjct: 64 SSYARVFIEKLPRPDVDLIDNLRPTIALEQRNPIKGSRATVGTHTEIYDYLRIIFSKV 121 >UniRef50_B8GRH5 Excinuclease ABC, A subunit n=10 Tax=Bacteria RepID=B8GRH5_THISH Length = 1889 Score = 990 bits (2560), Expect = 0.0, Method: Composition-based stats. Identities = 401/1008 (39%), Positives = 545/1008 (54%), Gaps = 102/1008 (10%) Query: 2 DKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYA 61 D+I + GAR +NLK ++L +P ++LIVVTG+SGSGKSSLAFDT+YAEGQRRYVE+ S YA Sbjct: 4 DRIRIFGARQNNLKGLDLELPLNELIVVTGVSGSGKSSLAFDTVYAEGQRRYVETFSPYA 63 Query: 62 RQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCP 121 RQFL M+KP VD IEG+ PAI+I+Q + RSTVGT+TE++D+L+LL+AR C Sbjct: 64 RQFLDRMDKPAVDRIEGVLPAIAIDQTNPVRTSRSTVGTMTELNDHLKLLYARAAHLHCR 123 Query: 122 DHDVPLAAQTVSQMVDNVLSQPE--GKRLMLLAPIIKERKGEHTKTLENLASQGYIRARI 179 + T + + L + G R+M++ P+ + +L +QGY R Sbjct: 124 GCGTRVRCDTPEAIANEWLERAHRDGTRVMVVFPVPVPENFSLEEVKGHLKAQGYER--F 181 Query: 180 DGEVCDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVADM-- 237 GE +EV+ DR +V RL E+ ETAL G V + Sbjct: 182 HGET-------------DQRLEVIQDRLRVEPGNRGRLVEALETALHHGQGRVRVYPLGE 228 Query: 238 DDPKAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQN 297 D + +SA+ C C E P FSFN+P GAC C G G D D VI + Sbjct: 229 DREALAPVDYSADLHCAACDLHYSETTPNHFSFNSPIGACEACRGFGRTMGIDLDLVIPD 288 Query: 298 PELSLAGGAIRGWDRRNFYYFQ-MLKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKENI 356 +SL GA++ W +Y Q LK+ A ++ PW LS + V+ G G Sbjct: 289 GRVSLGEGAVKPWQTDAYYECQAELKTFARKRGVPLDLPWDELSDDQKAWVIEGEGD--- 345 Query: 357 EFKYMNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGTRLRR 416 + G+ + ++ +R L+++ S PC +C+G RL+ Sbjct: 346 ------------FDDGLWYGIRRFFDWLETKSYKMHIRVLLSRYRSYEPCKACQGARLKP 393 Query: 417 EARHVYVE-------------------------------NTPLPAISDMSIGHAMEFFNN 445 ++ + L + + + FF+ Sbjct: 394 DSLLWRLGTQADADGVLEPGARFLPAGISWSRDLLETLPGLCLHDLMQVPLARCKAFFDQ 453 Query: 446 LKLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGL 505 L L + + +L EI RL +L VGL YLTL R + TLSGGE QRI L + +G L Sbjct: 454 LHLPAPLDEATDLLLAEIRARLNYLCEVGLGYLTLDRQSRTLSGGEVQRINLTTALGTSL 513 Query: 506 VGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAG 565 V ++VLDEPSIGLH RD +R++G L LRD GN+++VVEHD +RAAD ++D+GPG G Sbjct: 514 VNTLFVLDEPSIGLHPRDMDRVVGVLRRLRDAGNSLLVVEHDPQVMRAADRILDMGPGPG 573 Query: 566 VHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEVPKKRVPANPEK-VLKLTGARGNNLK 624 GGEVV G I+ +SLTGQY+SG++++ +P P + + L+L GA +NLK Sbjct: 574 ERGGEVVFFGTPAQILRSRQSLTGQYLSGRKQVALPSASRPPDGDTVWLELRGAAQHNLK 633 Query: 625 DVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAEPAPYRDIQGLEHFDK 684 + P+G C+TGVSGSGKSTLI D L+P + L G + + G E D Sbjct: 634 GIDARFPLGRLVCVTGVSGSGKSTLIQDLLYPALAK-LKGRPEYPAGAFGSLIGHESLDA 692 Query: 685 VIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESRARGYTPGRFSFNVRGGRCEACQ 744 V+ +DQSPIGRT RS PA+Y G F +R+LFA P ++ RGYT G FSFN GRC C Sbjct: 693 VVMVDQSPIGRTARSCPASYVGAFDAIRKLFAEEPLAKERGYTAGTFSFNSGNGRCPVCT 752 Query: 745 GDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKYKGKTIHE-----VLDMTIEEAREF 799 G G VEM FL D+Y+ C +C G+RY E L++K G H VL MT+ EA F Sbjct: 753 GSGFEHVEMQFLSDVYLRCGECDGRRYRPEVLQVKALGAEGHAADLSGVLGMTVTEALAF 812 Query: 800 FDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRG----------- 848 F VP + + L+ L VGL Y+RLGQ TLSGGEAQR+KLA L + Sbjct: 813 FAHVPEVQQSLEPLAAVGLEYLRLGQPVPTLSGGEAQRLKLAGHLVQHAGRNVGRASARH 872 Query: 849 ------------------TGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEH 890 G TL++LDEPTTGLHF DI +LL L +L+ QG++++VIEH Sbjct: 873 AAASTGTASRAEARPTGERGGTLFLLDEPTTGLHFEDIARLLKALRRLQAQGHSLIVIEH 932 Query: 891 NLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLKP 938 NLDVI+ ADW++DLGPEGG GGGEI+ GTP V + SHT L+ Sbjct: 933 NLDVIRAADWLIDLGPEGGDGGGEIVCEGTPAQVMKHPGSHTGAALRA 980 Score = 646 bits (1668), Expect = 0.0, Method: Composition-based stats. Identities = 287/630 (45%), Positives = 387/630 (61%), Gaps = 50/630 (7%) Query: 357 EFKYMNDRGDTSIRRHPF------EGVLHNMERRYKETESSAVREELAKFISNRPCASCE 410 F + R + RH + GV+ + + E S E L S + C +C Sbjct: 1258 SFDVPDPRLFSYNARHGWCRTCFGTGVV---LKGFDEAHSGEEGEWLEAGESRQTCPACH 1314 Query: 411 GTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDRLKFL 470 G RLR EA V + +S + + A +F LK + + IA IL EI RL FL Sbjct: 1315 GQRLRPEALAVRFRERSIGELSALPVKAARAWFEKLKPKARESAIARDILPEIRGRLAFL 1374 Query: 471 VNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGT 530 VGL YL+L R A TLSGGEAQRIRLA+Q+G L GV Y+LDEP+IGLH RDN LL T Sbjct: 1375 EQVGLGYLSLDRGAPTLSGGEAQRIRLAAQLGTNLQGVCYILDEPTIGLHPRDNRMLLDT 1434 Query: 531 LIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQ 590 L L+ GNTV+VVEHDED IR+A+HVID+GPGAG GG +VA+G ++ +M PESLTG+ Sbjct: 1435 LHRLQAKGNTVVVVEHDEDTIRSAEHVIDLGPGAGERGGRLVAQGSVKQVMKAPESLTGR 1494 Query: 591 YMSGKRKIEVPKKR-VPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTL 649 +++ + + +R A L + GA NNL++V +++P+ C+TGVSGSGKSTL Sbjct: 1495 FLAHPLRHPLVARRPTKAGQAPALSIEGACLNNLRNVAVSIPLNRLVCVTGVSGSGKSTL 1554 Query: 650 INDTLF-PIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVF 708 + + L+ +A+R D++G + ++V+++DQ+PIGRTPRS PATY GVF Sbjct: 1555 VREVLYRNLAERVGKRGRKPALTGCADLEGWQDLERVLEVDQTPIGRTPRSCPATYVGVF 1614 Query: 709 TPVRELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKG 768 +R+L+A PE+R RG+ RFSFN GGRC C+G GV ++EM FLPD+ VPC+ C G Sbjct: 1615 DRIRKLYAETPEARLRGWNASRFSFNTPGGRCAVCEGQGVRRIEMSFLPDVVVPCEACGG 1674 Query: 769 KRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSAT 828 RY RETLE ++K ++I +VL+M+++EA FF A PA+ LQ L DVGL Y+RLGQ + Sbjct: 1675 GRYGRETLEARFKDRSIADVLNMSVDEAVPFFTAHPAIHHALQLLQDVGLGYLRLGQPSP 1734 Query: 829 TLSGGEAQRVKLARELSKRG--------------------------------------TG 850 TLSGGEAQR+KL ELS+ G + Sbjct: 1735 TLSGGEAQRMKLVTELSRSGKTFANTVGRASARQPEAWTGIASRAEARPTARPSGQARSR 1794 Query: 851 QTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADWIVDLGPEGGS 910 +LYILDEPT GLH AD+++L+ VLH+L + G++++VIEHNLDVI ADWI+D+GPEGG Sbjct: 1795 GSLYILDEPTVGLHMADVEKLIRVLHRLVEAGHSVIVIEHNLDVIAEADWIIDMGPEGGD 1854 Query: 911 GGGEILVSGTPETVAECEASHTARFLKPML 940 GGG + GTPE++ SHT R L L Sbjct: 1855 GGGRVAGQGTPESMVR-RKSHTGRMLGAFL 1883 Score = 321 bits (824), Expect = 7e-86, Method: Composition-based stats. Identities = 117/291 (40%), Positives = 175/291 (60%), Gaps = 3/291 (1%) Query: 3 KIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYAR 62 +I + AR HNLK +++ +PRD+ V+TG+SGSGKS++AFD L+ EGQRRY+ESL+AYAR Sbjct: 1004 EIRISNAREHNLKGVDIQVPRDRFTVITGVSGSGKSTVAFDILFNEGQRRYLESLNAYAR 1063 Query: 63 QFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCPD 122 + +P+VD + G+ P ++IEQ+++ +STVGT+TE+H +LRLL+ ++G CPD Sbjct: 1064 SLVQPASRPEVDAVTGIPPTVAIEQRTSRGGHKSTVGTLTEVHHFLRLLYVKLGTQYCPD 1123 Query: 123 HDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARIDGE 182 DVP+ QT ++ +L Q + + + +LAP++ RKG +T ++G+ R+DGE Sbjct: 1124 CDVPIEPQTPEAILAALLKQWKSREVHVLAPLVSARKGYYTDLARWAHNRGFAHLRVDGE 1183 Query: 183 VCDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVADMDDPKA 242 + P+L+ ++H IE+ V KV L E+ L+L G VA + Sbjct: 1184 LIPTDPWPRLDRYREHDIELPVASLKVTPKAEAALREAIARGLDLGKGMIRVAPLS--GR 1241 Query: 243 EELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQ-YFDPD 292 E L+S ACP C S +PRLFS+N G C TC G GV FD Sbjct: 1242 AEKLYSTERACPSCARSFDVPDPRLFSYNARHGWCRTCFGTGVVLKGFDEA 1292 Score = 215 bits (547), Expect = 8e-54, Method: Composition-based stats. Identities = 108/363 (29%), Positives = 162/363 (44%), Gaps = 61/363 (16%) Query: 403 NRPCASCEGTRLRREARHVYVENT-----PLPAISDMSIGHAMEFFNNLKLAGQRAKIAE 457 C C+G R R E V L + M++ A+ FF ++ Sbjct: 768 YLRCGECDGRRYRPEVLQVKALGAEGHAADLSGVLGMTVTEALAFFAHVP---------- 817 Query: 458 KILKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGA-------------- 503 E+ L+ L VGL YL L + TLSGGEAQR++LA + Sbjct: 818 ----EVQQSLEPLAAVGLEYLRLGQPVPTLSGGEAQRLKLAGHLVQHAGRNVGRASARHA 873 Query: 504 ----------------GLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHD 547 G +++LDEP+ GLH D RLL L L+ G+++IV+EH+ Sbjct: 874 AASTGTASRAEARPTGERGGTLFLLDEPTTGLHFEDIARLLKALRRLQAQGHSLIVIEHN 933 Query: 548 EDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEVPK----- 602 D IRAAD +ID+GP G GGE+V EG +M P S TG + + + + Sbjct: 934 LDVIRAADWLIDLGPEGGDGGGEIVCEGTPAQVMKHPGSHTGAALRAEAAGSIAESSAAS 993 Query: 603 -KRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQ 661 ++ ++++ AR +NLK V + +P FT ITGVSGSGKST+ D LF QR+ Sbjct: 994 YRKAAKTVRAEIRISNAREHNLKGVDIQVPRDRFTVITGVSGSGKSTVAFDILFNEGQRR 1053 Query: 662 L------NGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELF 715 ++ +PA ++ + + I+Q +S T T V +R L+ Sbjct: 1054 YLESLNAYARSLVQPASRPEVDAVTGIPPTVAIEQRTSRGGHKSTVGTLTEVHHFLRLLY 1113 Query: 716 AGV 718 + Sbjct: 1114 VKL 1116 Score = 95.4 bits (236), Expect = 1e-17, Method: Composition-based stats. Identities = 40/123 (32%), Positives = 59/123 (47%), Gaps = 6/123 (4%) Query: 609 PEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIA 668 + +++ GAR NNLK + L LP+ +TGVSGSGKS+L DT++ QR+ Sbjct: 2 SQDRIRIFGARQNNLKGLDLELPLNELIVVTGVSGSGKSSLAFDTVYAEGQRRYVETFSP 61 Query: 669 EPAPYRDIQGLEHFDKV------IDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESR 722 + D D++ I IDQ+ RT RS T T + ++ L+A Sbjct: 62 YARQFLDRMDKPAVDRIEGVLPAIAIDQTNPVRTSRSTVGTMTELNDHLKLLYARAAHLH 121 Query: 723 ARG 725 RG Sbjct: 122 CRG 124 Score = 89.6 bits (221), Expect = 6e-16, Method: Composition-based stats. Identities = 35/110 (31%), Positives = 59/110 (53%), Gaps = 5/110 (4%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 63 + + GA +NL+N+ + IP ++L+ VTG+SGSGKS+L + LY R E + R+ Sbjct: 1518 LSIEGACLNNLRNVAVSIPLNRLVCVTGVSGSGKSTLVREVLY----RNLAERVGKRGRK 1573 Query: 64 FLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFA 113 +L D++ + L + ++Q PRS T + D +R L+A Sbjct: 1574 P-ALTGCADLEGWQDLERVLEVDQTPIGRTPRSCPATYVGVFDRIRKLYA 1622 >UniRef50_Q7URK7 Excinuclease ABC subunit A n=1 Tax=Rhodopirellula baltica RepID=Q7URK7_RHOBA Length = 1031 Score = 989 bits (2558), Expect = 0.0, Method: Composition-based stats. Identities = 381/1004 (37%), Positives = 557/1004 (55%), Gaps = 87/1004 (8%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 63 I VRG R HNL+++++ IPR +L+V+ GLSGSGK+SLA DTLYAEGQR Y+ES SAY RQ Sbjct: 48 ISVRGCRVHNLRDVDVDIPRGELVVICGLSGSGKTSLALDTLYAEGQRSYIESFSAYTRQ 107 Query: 64 FLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCPDH 123 +L+ ++KPD D I G+ PAI++ + S RSTV T TEI ++LRLLFAR E C Sbjct: 108 YLNQLDKPDCDSISGIPPAIAVTRASAVKTNRSTVATSTEIAEHLRLLFARASELVCYQC 167 Query: 124 DVPLAAQTVSQMVDNVLSQPEGK--RLMLLAPIIKERKGEHTKTLENLASQGYIRARIDG 181 P+ + + LS P K R ++ + + ++ L L +G++R + G Sbjct: 168 GQPVVIDSPQSVAAQ-LSDPAAKVQRAIVGFELWLPDRKAASEILLGLQQEGFVRLILKG 226 Query: 182 EVCDLSDPPKLELQKK-----HTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVAD 236 E LSD + ++ K+ T VVVDR ++ R ES ETA+ G AVV Sbjct: 227 ETFQLSDEDRSKMAKRIGSKGVTATVVVDRLSSSSEM-SRWTESLETAMTEGNGRAVVLF 285 Query: 237 MDDPKAE---------------ELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCD 281 D + + + S C C + PR F+FN+P GACP C+ Sbjct: 286 QSDAEDRFKGLPTQSIDGREILQRVASDRQRCDHCDIEYPDPVPRAFNFNHPMGACPECE 345 Query: 282 GLGVQQYFDPDRVIQNPELSLAGGAIRGWDRRNFYY-FQMLKSLADHYKFDVEAPWGSLS 340 G G D DR++ + S+ GAI W+ ++ + + L +LAD Y V+ P+ SL Sbjct: 346 GFGDVIGIDMDRIVPDKSKSIREGAIAPWNAPSYQHELEELLALADDYDLPVDVPFSSLK 405 Query: 341 ANVHKVVLYGSGKENIEFKYMNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKF 400 K++ G +R F G+ ++ +R +++ Sbjct: 406 KKHLKLIHEG------------------VRERKFGGLNGFFAWLDRKKYKMHIRVFASRY 447 Query: 401 ISNRPCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFN---------------- 444 S R C +C G RL+ E+ V + + M +FF+ Sbjct: 448 RSYRTCPACGGDRLKPESLAYKVGGHNVSEMLAMRCDELDQFFSDWFGADAENATATDAT 507 Query: 445 -----------------NLKLAGQRAK--IAEKILKEIGDRLKFLVNVGLNYLTLSRSAE 485 L +A Q+ + IA + +++I DRL++L VGL YL L+R+ Sbjct: 508 TEGEIVGERLVGYQTQAELLIADQQRRHTIASEPVRQIRDRLRYLDQVGLGYLQLNRTLR 567 Query: 486 TLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVE 545 TLSGGE QRI L +G+ LVG++YVLDEP+ GLH D E+L+ + LRD GNTV+ VE Sbjct: 568 TLSGGETQRIALTLALGSTLVGMLYVLDEPTAGLHPIDVEQLVDAITQLRDRGNTVVAVE 627 Query: 546 HDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEVPKKRV 605 H++ I+ AD VI+IGPGAGV GG V EG + ++ +SLTG+Y+ RK + Sbjct: 628 HNDTLIQLADRVIEIGPGAGVGGGLVTFEGTPKQLVKAKDSLTGRYLGKNRKRSIQLDLT 687 Query: 606 PAN-PEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNG 664 P LKL+GA G+NL+D+ + P+G T +TG SGSGKS+LI+DTLF +L Sbjct: 688 DGRAPTGSLKLSGASGHNLRDIDVEFPLGCLTVVTGRSGSGKSSLIHDTLFGAVSTRLAE 747 Query: 665 ATIAEPA--------PYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFA 716 P+ P++ ++G D + +DQSPI R+PRS P T+ F P+R+ FA Sbjct: 748 RRGEVPSADIVANTLPFQSLRGENAIDDCLLVDQSPISRSPRSCPVTFAKAFDPIRQAFA 807 Query: 717 GVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETL 776 +++ R + PG FSFN G+C AC+G GV ++M FL D+ + C +C+G+RY E L Sbjct: 808 ETVDAKIRNFKPGHFSFNSSAGQCSACEGAGVQTIDMQFLADVSMRCGECRGRRYRDEVL 867 Query: 777 EIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQ 836 +++Y+ TI +VL+MT+ EA EFF +P + KL+ L+DVGL Y+ LGQ ATTLS GEAQ Sbjct: 868 QVRYRDCTIADVLEMTVREASEFFREMPKVQNKLKRLIDVGLDYVALGQPATTLSSGEAQ 927 Query: 837 RVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIK 896 R+KLA L+ +TL+++DEPTTGLHF DI++LL L D+G+++VVIEH+ ++ Sbjct: 928 RLKLAAFLAGSSKRRTLFLMDEPTTGLHFDDIRRLLKCFDALIDEGHSLVVIEHHPMLMA 987 Query: 897 TADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLKPML 940 AD I+++GP GG+I+ SGT + VA S T + L+ ML Sbjct: 988 AADQIIEVGPGAAENGGQIVASGTRDEVASVNDSLTGQILRQML 1031 Score = 84.6 bits (208), Expect = 2e-14, Method: Composition-based stats. Identities = 39/123 (31%), Positives = 54/123 (43%), Gaps = 22/123 (17%) Query: 3 KIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYAR 62 +++ GA HNL++I++ P L VVTG SGSGKSSL DTL+ R E Sbjct: 695 SLKLSGASGHNLRDIDVEFPLGCLTVVTGRSGSGKSSLIHDTLFGAVSTRLAE------- 747 Query: 63 QFLSLMEKPDVDHIEGLSP------------AISIEQKSTSHNPRSTVGTITEIHDYLRL 110 E P D + P + ++Q S +PRS T + D +R Sbjct: 748 ---RRGEVPSADIVANTLPFQSLRGENAIDDCLLVDQSPISRSPRSCPVTFAKAFDPIRQ 804 Query: 111 LFA 113 FA Sbjct: 805 AFA 807 >UniRef50_B9XQK9 Excinuclease ABC, A subunit n=3 Tax=Bacteria RepID=B9XQK9_9BACT Length = 1048 Score = 987 bits (2553), Expect = 0.0, Method: Composition-based stats. Identities = 383/1042 (36%), Positives = 535/1042 (51%), Gaps = 116/1042 (11%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 63 I +RG R +NLKN +L +P+++LIV+TGLSGSGKSSLAFDTL+AEGQRRY+E+ S YARQ Sbjct: 12 IRLRGVRHNNLKNFDLDLPQNQLIVITGLSGSGKSSLAFDTLFAEGQRRYIETFSPYARQ 71 Query: 64 FLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCPDH 123 F M+KP VD IEG+ PAI+IEQ+++ RSTVGT+TE+ DY++LL+ V + C Sbjct: 72 FFDRMDKPQVDSIEGIPPAIAIEQRNSVKTTRSTVGTMTELCDYMKLLWPHVSQLYCRQC 131 Query: 124 DVPLAAQTVSQMVDNVLSQPEGKR--------LMLLAPIIKERKGEHTKTLENLASQGYI 175 P+ ++ + LS + R +++ + K ++L ++ QGY Sbjct: 132 HQPVRKDPPQRIWE-TLSAEQKTRDNGAKVDEVLVTFALPISEKLSLDESLALISKQGYQ 190 Query: 176 RARIDGEVCDLSDPPKLELQ-KKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVV 234 R ++ +V L + L + K T+ V+ DR K+ + R E+ E A G + Sbjct: 191 RLLVNNKVVRLEEATDLLRRVKPETVTVIQDRVKIARENRARFVEACEQAYHFGKGKLSL 250 Query: 235 A-------DMDDPKAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQ 287 D FS C C +E LFSFN+P GACPTC G G Sbjct: 251 HYVTAESTDTQHAIRHIRPFSNKLHCATCDIDYKESSTALFSFNHPIGACPTCRGFGRTI 310 Query: 288 YFDPDRVIQNPELSLAGGAIRGWDRRNFYYFQM-LKSLADHYKFDVEAPWGSLSANVHKV 346 D D + + +LA GA++ W Q L + + + L A Sbjct: 311 TIDYDLALPDKTKTLAEGAVKPWQTGQGAESQADLMKFCRTRRVPTDVRFKDLPAGFQDW 370 Query: 347 VLYGSGKENIEFKYMNDRGDTSIRRHP--FEGVLHNMERRYKETESSAVREELAKFISNR 404 V+ G D G S+ P + G+ + VR L+++ S Sbjct: 371 VINGD----------KDYGKDSMHEWPRAWYGIKGYFRWLESKAYKMHVRVLLSRYRSYV 420 Query: 405 PCASCEGTRLRREARHVYVENT-----------------PLPAISDMSIGHAMEFFNNLK 447 C C G R + E V++ L + + A+ F L Sbjct: 421 LCPDCHGQRFQAETLLYKVQSKFSPRNAPSNGSSQTSLITLSDFYRLPLRDALAFIEELS 480 Query: 448 LAGQRAKIA--EKILKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGL 505 + I E+ RL +L NVGL YLTL R +LSGGE +R+ L + +G L Sbjct: 481 TRHNVKPSSPLGLIFNEVRARLGYLNNVGLGYLTLDRPTRSLSGGETERVNLTTCLGTRL 540 Query: 506 VGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAG 565 V ++VLDEPS+GLH RD RL+ L LR+ GNTV+VVEH+ +RAAD +IDIGPG G Sbjct: 541 VNTLFVLDEPSVGLHPRDTGRLVNILEQLRNAGNTVVVVEHEASVMRAADQIIDIGPGHG 600 Query: 566 VHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEVPKKRVPANPEK-------------- 611 GG+VV +G I+ P SLTGQY+SG R I +P++R K Sbjct: 601 ATGGQVVFQGSYTDILKSPVSLTGQYLSGTRDIPLPQRRHVRLETKGAKPTRNGRGQAAA 660 Query: 612 ------VLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQ------ 659 L L A +NL+D+T+ +P+ F CITGVSGSGK+TL + L P+ Sbjct: 661 EPAKTSFLTLAHAIQHNLQDLTVRIPLERFVCITGVSGSGKTTLAREVLLPLLSSSLNEP 720 Query: 660 -------------RQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTG 706 T + G E +V+ +DQS +G+TPRSNPA Y G Sbjct: 721 ESSPSESEDNEETEHATRNTQLGNGHTPTLTGSESLGRVVLVDQSILGKTPRSNPAVYIG 780 Query: 707 VFTPVRELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQC 766 F +R++FA +R RG FSFN G+CE C+G G K+EM FL D+++ C +C Sbjct: 781 AFDDIRDVFAQSELARQRGLNSSAFSFNSGQGQCERCRGAGFEKIEMQFLSDVFIKCPEC 840 Query: 767 KGKRYNRETLEIKY----------------KGKTIHEVLDMTIEEAREF---FDAVPALA 807 G+RY LEIK + +I ++LD T++EA +F F A + Sbjct: 841 NGRRYRPHILEIKVQPPLVSSNAANADSRSREMSIADLLDATVDEAVDFLSQFLDSKAAS 900 Query: 808 RK---LQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSK------RGTGQTLYILDE 858 R L+ L DVGL Y+R+GQ TLSGGE+QR+KL R L++ T TL++ DE Sbjct: 901 RAAQSLKLLQDVGLGYLRVGQPINTLSGGESQRLKLVRHLAEFSHSSAGDTKPTLFLFDE 960 Query: 859 PTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVS 918 PTTGLHF D++ LL V +L D +++V+IEHNLDVIK+ADW++DLGP+ G GGEI+ Sbjct: 961 PTTGLHFDDVRVLLKVFQRLVDARHSVVIIEHNLDVIKSADWVIDLGPDAGDRGGEIVAE 1020 Query: 919 GTPETVAECEASHTARFLKPML 940 GTPE VA C SHT + LK L Sbjct: 1021 GTPEEVAACAKSHTGQALKAEL 1042 Score = 171 bits (433), Expect = 1e-40, Method: Composition-based stats. Identities = 67/219 (30%), Positives = 105/219 (47%), Gaps = 31/219 (14%) Query: 406 CASCEGTRLRREARHVYVEN----------------TPLPAISDMSIGHAMEFFNNLKLA 449 C C G R R + V+ + + D ++ A++F + + Sbjct: 837 CPECNGRRYRPHILEIKVQPPLVSSNAANADSRSREMSIADLLDATVDEAVDFLSQFLDS 896 Query: 450 GQRAKIAEKILKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIG------- 502 ++ A+ LK L +VGL YL + + TLSGGE+QR++L + Sbjct: 897 KAASRAAQS--------LKLLQDVGLGYLRVGQPINTLSGGESQRLKLVRHLAEFSHSSA 948 Query: 503 AGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGP 562 +++ DEP+ GLH D LL L D ++V+++EH+ D I++AD VID+GP Sbjct: 949 GDTKPTLFLFDEPTTGLHFDDVRVLLKVFQRLVDARHSVVIIEHNLDVIKSADWVIDLGP 1008 Query: 563 GAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEVP 601 AG GGE+VAEG E + A +S TGQ + + E P Sbjct: 1009 DAGDRGGEIVAEGTPEEVAACAKSHTGQALKAELAGEHP 1047 Score = 85.4 bits (210), Expect = 1e-14, Method: Composition-based stats. Identities = 38/112 (33%), Positives = 52/112 (46%), Gaps = 6/112 (5%) Query: 609 PEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIA 668 V++L G R NNLK+ L LP ITG+SGSGKS+L DTLF QR+ Sbjct: 8 APAVIRLRGVRHNNLKNFDLDLPQNQLIVITGLSGSGKSSLAFDTLFAEGQRRYIETFSP 67 Query: 669 EPAPYRD------IQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVREL 714 + D + +E I I+Q +T RS T T + ++ L Sbjct: 68 YARQFFDRMDKPQVDSIEGIPPAIAIEQRNSVKTTRSTVGTMTELCDYMKLL 119 >UniRef50_A1WZ98 UvrA family protein n=2 Tax=Proteobacteria RepID=A1WZ98_HALHL Length = 1896 Score = 978 bits (2528), Expect = 0.0, Method: Composition-based stats. Identities = 407/1034 (39%), Positives = 549/1034 (53%), Gaps = 131/1034 (12%) Query: 2 DKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYA 61 + I +RGAR HNL+ ++L +P +LIVVTG+SGSGKSSLAFDT+YAEGQRRYVE+ SAYA Sbjct: 3 EPIRIRGARQHNLQGLDLDLPAGELIVVTGVSGSGKSSLAFDTVYAEGQRRYVETFSAYA 62 Query: 62 RQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCP 121 RQFL M++P V+ I+G+ PAI+I+Q + RSTVGT+TE+ D+L+LLFAR +P C Sbjct: 63 RQFLERMDRPHVERIDGVPPAIAIDQVNPVRTSRSTVGTMTELSDHLKLLFARAAQPYCS 122 Query: 122 DHDVPLAAQTVSQMVDNVLS------QPEGKRLMLLAPIIKERKGEHTKTLENLASQGYI 175 P+ T + + +L+ P G R+ + + + + + L+SQGY Sbjct: 123 GCGRPVRPDTPESVAEGLLAGEGAAPWPPGTRVAVTFFVAVPDGLDRDELRQMLSSQGYT 182 Query: 176 RARIDGEVCDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVA 235 R ++ +EVV DR ++ + RL E+ E AL+ G V Sbjct: 183 RIY----------------ERPGGVEVVQDRLRLDAERRGRLIEAVEIALDKGRGRCQVW 226 Query: 236 DMD---DPKAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPD 292 + +P E +SA F C C LFSFN+P GAC TC G G DPD Sbjct: 227 ALGEDREPAGEPRRYSATFHCAGCDRDYPRPTAELFSFNSPVGACDTCRGFGRNMEIDPD 286 Query: 293 RVIQNPELSLAGGAIRGWDRRNFYYFQM-LKSLADHYKFDVEAPWGSLSANVHKVVLYGS 351 VI +P SLA GAI+ + Q L A V+ PW L A + V G Sbjct: 287 LVIPDPTRSLADGAIKPFRGGASVECQEDLLRAARRRGVAVDVPWQELDAADRQWVWDGE 346 Query: 352 GKENIEFKYMNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEG 411 DR S R + G +ER ++ VR +L+++ + R C C+G Sbjct: 347 -----------DRWGRSGRWYGVRGYFDYLER---KSYKMHVRVQLSRYRTYRTCPDCQG 392 Query: 412 TRLRREARHVYVENT-------------------------------PLPAISDMSIGHAM 440 RL EA + L ++ + + Sbjct: 393 ARLVPEALDFRLGGRQEADAVLAPEQRFRPRHLELDDAALAALPGLTLHDLATLPLERLQ 452 Query: 441 EFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQ 500 +FF+ L L + A +L EI R+ +L VGL YLTL R + TLSGGE QRI L + Sbjct: 453 QFFDGLVLPPPLDEAAATVLDEIRSRVGYLNEVGLGYLTLDRQSRTLSGGEVQRINLTTA 512 Query: 501 IGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDI 560 +G LV ++VLDEPSIGLH RD +RL+G L LRD GN+++VVEHD + AAD +ID+ Sbjct: 513 LGTSLVNTLFVLDEPSIGLHPRDVDRLVGILQRLRDAGNSLLVVEHDPQVMAAADRIIDM 572 Query: 561 GPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEVP------------------- 601 GPG G GG VV G + A +S T Y++G+R++ Sbjct: 573 GPGPGERGGRVVFNGAPAELYAA-DSATADYLTGRRRVSRRDGCAPGAWGAGEELSEARL 631 Query: 602 -----------------KKRVPANP---------EKVLKLTGARGNNLKDVTLTLPVGLF 635 +KR ++P L + GAR +NL+ + + +P+G Sbjct: 632 AGRTRRDARSAGPDGAGEKRSASSPAPHQAAAADGPALTIRGARAHNLQGIDVAIPLGGL 691 Query: 636 TCITGVSGSGKSTLINDTLFPIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGR 695 C+TGVSGSGKSTL D L+ RQ G + P + I G E V +DQSPIG+ Sbjct: 692 VCLTGVSGSGKSTLAEDILYRGLLRQ-QGEAVEAPGEHDGIDGAEAITAVALVDQSPIGK 750 Query: 696 TPRSNPATYTGVFTPVRELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHF 755 + RS P +YTG P+R+ FA P +R RGYT G FSFN GRC C+G G VEM F Sbjct: 751 SARSCPVSYTGALDPIRKRFAAAPLARERGYTAGAFSFNAGNGRCPTCKGSGFEHVEMQF 810 Query: 756 LPDIYVPCDQCKGKRYNRETLEIKYKG-----KTIHEVLDMTIEEAREFFDAVPALARKL 810 L D+Y+ C C G+R+ E LE++ +G +IHEVL MT +EA EFF + R+L Sbjct: 811 LSDVYLACPDCDGRRFRAEVLEVQVEGPEGRRASIHEVLAMTADEAVEFFADSREVVRRL 870 Query: 811 QTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQ-------TLYILDEPTTGL 863 + L VGL Y+RLGQ TLSGGEAQR+KLA L++RG + TL I DEPTTGL Sbjct: 871 EPLRAVGLGYLRLGQPVPTLSGGEAQRLKLAGHLAERGKAKGGESGAGTLLIFDEPTTGL 930 Query: 864 HFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPET 923 HF+D Q LLD +L D G +++VIEHNLD+I ADWI+DLGPEGG GGG +L SGTP Sbjct: 931 HFSDCQVLLDAFQRLVDAGYSLLVIEHNLDLIANADWILDLGPEGGEGGGRLLASGTPAQ 990 Query: 924 VAECEASHTARFLK 937 +A A+ T R L Sbjct: 991 LAAH-ATDTGRALA 1003 Score = 641 bits (1655), Expect = 0.0, Method: Composition-based stats. Identities = 279/551 (50%), Positives = 362/551 (65%), Gaps = 16/551 (2%) Query: 404 RPCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEI 463 R C +C+G RL AR V + ++ S+ + L L + A I ++ E+ Sbjct: 1340 RVCPACQGGRLNPVARAVRFHGRSITEVTATSVAELRPWLEGLSLDDREAAIGGDVIAEV 1399 Query: 464 GDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRD 523 RL FL VGL YLTL R+A TLSGGEAQRIRLA+ +GAGL GV YVLDEP+IGLH RD Sbjct: 1400 RARLAFLERVGLGYLTLDRAAPTLSGGEAQRIRLAASLGAGLQGVCYVLDEPTIGLHARD 1459 Query: 524 NERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAV 583 N LLG L L + GNTV+VVEHDE+ IRAA+H++D+GPGAG HGG VVAEG L A+ Sbjct: 1460 NAMLLGALRELAEAGNTVVVVEHDEETIRAAEHLVDLGPGAGRHGGRVVAEGDLAAVTGN 1519 Query: 584 PESLTGQYMSGKRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSG 643 +SLTG+ ++ + +R A P L +TGA +NL+ V + LP+G +TGVSG Sbjct: 1520 ADSLTGRVLAHPPRHPTRARRSEA-PAAQLTVTGAHRHNLQQVDVALPLGRLIGVTGVSG 1578 Query: 644 SGKSTLINDTLFPIAQRQLN---GATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSN 700 SGKS+L+ + + P + L GA + EP + + G EH +V+++DQ+PIGRTPRS Sbjct: 1579 SGKSSLVREVIEPSVRALLGRKRGAPVPEPVGCQAVAGTEHLRRVLEVDQTPIGRTPRSC 1638 Query: 701 PATYTGVFTPVRELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIY 760 PATY G++ P+R LFAG E+R RG+ RFSFN +GGRCEAC G GV VEM FLPD+ Sbjct: 1639 PATYVGIWDPIRRLFAGTEEARLRGWDAARFSFNTKGGRCEACSGQGVKTVEMSFLPDVK 1698 Query: 761 VPCDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTY 820 VPC+ C G R++ ET +++Y G +I +VL ++IEEA+ FF A P + L+ L DVGL Y Sbjct: 1699 VPCEVCGGTRFDEETRQVRYAGHSIDQVLALSIEEAQAFFSAHPRIHHVLRLLCDVGLGY 1758 Query: 821 IRLGQSATTLSGGEAQRVKLARELSK-----------RGTGQTLYILDEPTTGLHFADIQ 869 + LGQ + TLSGGEAQR+KL EL+K R TLY+LDEPT GLH AD+Q Sbjct: 1759 LSLGQPSPTLSGGEAQRLKLVTELAKARPVDGGPGRARQAAPTLYLLDEPTVGLHIADVQ 1818 Query: 870 QLLDVLHKLRDQGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEA 929 +L DV H L D G+T+VVIEHNLDVI AD ++DLGPEGG GG ++ SG PE VA + Sbjct: 1819 RLTDVFHALVDAGHTVVVIEHNLDVIAEADHVIDLGPEGGDAGGSVVGSGAPEAVAAMDT 1878 Query: 930 SHTARFLKPML 940 T R L+ L Sbjct: 1879 P-TGRALQAFL 1888 Score = 325 bits (833), Expect = 6e-87, Method: Composition-based stats. Identities = 128/289 (44%), Positives = 181/289 (62%), Gaps = 1/289 (0%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 63 IEV AR HNL+NI++ IPRD+L VVTG+SGSGKS+LAFD L+AEGQRRY+ESL+AYARQ Sbjct: 1042 IEVHQAREHNLRNIDVTIPRDRLTVVTGVSGSGKSTLAFDILFAEGQRRYLESLNAYARQ 1101 Query: 64 FLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCPDH 123 + +PDV + G+ PA++IEQ+++ RSTV T+TEI+ YLRLL+ R+G CP+ Sbjct: 1102 LVQPASRPDVGAVTGIPPAVAIEQRTSRGGYRSTVATLTEIYHYLRLLYLRLGVQYCPEC 1161 Query: 124 DVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARIDGEV 183 V + AQT + +L G+R++ AP++ RKG + + A +GY R+DGE+ Sbjct: 1162 QVAIEAQTPVGIAARLLRDYRGQRIVFYAPLVVARKGIYKELAAWAAGRGYEALRVDGEL 1221 Query: 184 CDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVADMDDPKAE 243 + P+L+ ++H I++ + +V+ D L E E AL+ GT +A D Sbjct: 1222 QPTAQWPRLDRYREHDIDLPLGSLEVQPDAEAALRERLEEALDHGDGTVRIAPQDGGVEA 1281 Query: 244 ELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPD 292 E ++S ACP CG E +PRLFSFN+ G C C G G+ DPD Sbjct: 1282 ERVWSTRRACPGCGQGFAEPDPRLFSFNSRHGWCSGCHGTGLLVR-DPD 1329 Score = 210 bits (536), Expect = 2e-52, Method: Composition-based stats. Identities = 100/341 (29%), Positives = 153/341 (44%), Gaps = 53/341 (15%) Query: 406 CASCEGTRLRREARHVYVEN-----TPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKIL 460 C C+G R R E V VE + + M+ A+EFF + Sbjct: 818 CPDCDGRRFRAEVLEVQVEGPEGRRASIHEVLAMTADEAVEFFAD--------------S 863 Query: 461 KEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLV--------GVMYVL 512 +E+ RL+ L VGL YL L + TLSGGEAQR++LA + G + + Sbjct: 864 REVVRRLEPLRAVGLGYLRLGQPVPTLSGGEAQRLKLAGHLAERGKAKGGESGAGTLLIF 923 Query: 513 DEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVV 572 DEP+ GLH D + LL L D G +++V+EH+ D I AD ++D+GP G GG ++ Sbjct: 924 DEPTTGLHFSDCQVLLDAFQRLVDAGYSLLVIEHNLDLIANADWILDLGPEGGEGGGRLL 983 Query: 573 AEGPLEAIMAVPESLTGQYMSGKRKIEVPKKRVPANPEKV-------------------L 613 A G + A + TG+ ++ + A + + Sbjct: 984 ASGTPAQLAAHA-TDTGRALADDWASQAVAPDEGAGAAALQHPAVAEAAAPYTAPAPAAI 1042 Query: 614 KLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQL------NGATI 667 ++ AR +NL+++ +T+P T +TGVSGSGKSTL D LF QR+ + Sbjct: 1043 EVHQAREHNLRNIDVTIPRDRLTVVTGVSGSGKSTLAFDILFAEGQRRYLESLNAYARQL 1102 Query: 668 AEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVF 708 +PA D+ + + I+Q RS AT T ++ Sbjct: 1103 VQPASRPDVGAVTGIPPAVAIEQRTSRGGYRSTVATLTEIY 1143 Score = 187 bits (476), Expect = 1e-45, Method: Composition-based stats. Identities = 83/233 (35%), Positives = 115/233 (49%), Gaps = 27/233 (11%) Query: 727 TPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVP--------CDQCKGKRYNRETLEI 778 P FSFN R G C C G G++ + PD C C+G R N + Sbjct: 1302 DPRLFSFNSRHGWCSGCHGTGLLVRD----PDEAEAAELEAARVCPACQGGRLNPVARAV 1357 Query: 779 KYKGKTIHEVLDMTIEEAREFF--------------DAVPALARKLQTLMDVGLTYIRLG 824 ++ G++I EV ++ E R + D + + +L L VGL Y+ L Sbjct: 1358 RFHGRSITEVTATSVAELRPWLEGLSLDDREAAIGGDVIAEVRARLAFLERVGLGYLTLD 1417 Query: 825 QSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNT 884 ++A TLSGGEAQR++LA L G Y+LDEPT GLH D LL L +L + GNT Sbjct: 1418 RAAPTLSGGEAQRIRLAASLGAGLQG-VCYVLDEPTIGLHARDNAMLLGALRELAEAGNT 1476 Query: 885 IVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLK 937 +VV+EH+ + I+ A+ +VDLGP G GG ++ G V S T R L Sbjct: 1477 VVVVEHDEETIRAAEHLVDLGPGAGRHGGRVVAEGDLAAVTGNADSLTGRVLA 1529 Score = 168 bits (426), Expect = 9e-40, Method: Composition-based stats. Identities = 82/281 (29%), Positives = 122/281 (43%), Gaps = 54/281 (19%) Query: 353 KENIEFKYMNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREE-LAKF----------- 400 + +E + G+ + R + TE + +R A+F Sbjct: 1621 RRVLEVDQTPIGRTPRSCPATYVGIWDPIRRLFAGTEEARLRGWDAARFSFNTKGGRCEA 1680 Query: 401 ----------IS-----NRPCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNN 445 +S PC C GTR E R V + + +SI A FF+ Sbjct: 1681 CSGQGVKTVEMSFLPDVKVPCEVCGGTRFDEETRQVRYAGHSIDQVLALSIEEAQAFFS- 1739 Query: 446 LKLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGL 505 I L+ L +VGL YL+L + + TLSGGEAQR++L +++ Sbjct: 1740 -------------AHPRIHHVLRLLCDVGLGYLSLGQPSPTLSGGEAQRLKLVTELAKAR 1786 Query: 506 V------------GVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRA 553 +Y+LDEP++GLH D +RL L D G+TV+V+EH+ D I Sbjct: 1787 PVDGGPGRARQAAPTLYLLDEPTVGLHIADVQRLTDVFHALVDAGHTVVVIEHNLDVIAE 1846 Query: 554 ADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSG 594 ADHVID+GP G GG VV G EA+ A+ ++ TG+ + Sbjct: 1847 ADHVIDLGPEGGDAGGSVVGSGAPEAVAAM-DTPTGRALQA 1886 Score = 87.3 bits (215), Expect = 2e-15, Method: Composition-based stats. Identities = 37/115 (32%), Positives = 57/115 (49%), Gaps = 11/115 (9%) Query: 3 KIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYAR 62 ++ V GA HNL+ +++ +P +LI VTG+SGSGKSSL + + R + R Sbjct: 1547 QLTVTGAHRHNLQQVDVALPLGRLIGVTGVSGSGKSSLVREVI-EPSVRALL------GR 1599 Query: 63 QFLSLMEKP----DVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFA 113 + + + +P V E L + ++Q PRS T I D +R LFA Sbjct: 1600 KRGAPVPEPVGCQAVAGTEHLRRVLEVDQTPIGRTPRSCPATYVGIWDPIRRLFA 1654 >UniRef50_C0ADS9 Excinuclease ABC, A subunit n=1 Tax=Opitutaceae bacterium TAV2 RepID=C0ADS9_9BACT Length = 1647 Score = 968 bits (2502), Expect = 0.0, Method: Composition-based stats. Identities = 363/1005 (36%), Positives = 538/1005 (53%), Gaps = 75/1005 (7%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 63 I +RG R +NLKN +L IP + VVTG+SG+GKSSL FDTL+AEGQRRYVE+ SAY RQ Sbjct: 25 IRLRGVRQNNLKNFDLDIPLGRYTVVTGVSGAGKSSLVFDTLHAEGQRRYVETFSAYTRQ 84 Query: 64 FLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCPDH 123 FL L++KP VD IE + P+I+IEQ +T RSTVGT+TE+ D+ ++ F+ P+ Sbjct: 85 FLELLDKPQVDSIENIRPSIAIEQTNTVKTSRSTVGTMTELTDFFKVWFSHTARCYDPET 144 Query: 124 DVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARI---- 179 + + + L++ + + K T+ L+NL +QGY R I Sbjct: 145 GEQVEDDNPQTIWQKTRAAHADATLVIAFRVTRPEKLSWTEILQNLQAQGYTRVLISTPS 204 Query: 180 ----------DGEVCDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSG 229 + LQ + V DR + D R E+ ETAL Sbjct: 205 GAGVPPATSAAVTAARIDALQPSTLQPSTFLHVAQDRLAITDAHRSRFLEAVETALHFGQ 264 Query: 230 GTAVVADMDDPKAEEL-LFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQY 288 G + + E+ +S P G + R P +FSFN+P GACP C G G Sbjct: 265 GQVHLFAENSGTFHEVGHYSRGLHSPKTGRTFRAATPAMFSFNSPLGACPACRGFGRVIE 324 Query: 289 FDPDRVIQNPELSLAGGAIRGWDRRNFYYFQM-LKSLADHYKFDVEAPWGSLSANVHKVV 347 D I + LS+ GAI+ + + + + L A +K P+ L+ + + Sbjct: 325 IDYRLAIPDQTLSIEDGAIKPFVGQVYSMSREDLIRAARRHKIPTRIPYAQLTEKQREFI 384 Query: 348 LYGSGKENIEFKYMNDRGDTSIRRHP--FEGVLHNMERRYKETESSAVREELAKFISNRP 405 + G E++ RG+ + G+ T VR L+++ + Sbjct: 385 MLGEP----EYRARKARGEEIDYDTDDLWYGLKGFFNWLESTTYKMHVRVFLSRYRAYNL 440 Query: 406 CASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKI---------- 455 C++C G RL+ EA + LP + + + + + A R Sbjct: 441 CSACHGARLQPEALCWRWQGRTLPELYQLPVSELLAQLTQGREASPRPPSHVVDGNDSRQ 500 Query: 456 ----------------------AEKILKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQ 493 A L+ I RL++L VGL YLTL R+++TLSGGE + Sbjct: 501 SLERSSGGLGEASLPGQPSAAPAALALESILSRLRYLRQVGLGYLTLDRTSKTLSGGEVE 560 Query: 494 RIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRA 553 R+ L S +G LV ++VLDEPS+GLH RD +RL+ + L D GNTV+VVEHDE IRA Sbjct: 561 RVNLTSCLGTSLVDTLFVLDEPSVGLHPRDIDRLIAIIRTLTDAGNTVVVVEHDESMIRA 620 Query: 554 ADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEVPKKRVP--ANPEK 611 ADHVI+IGP G GG VV +G +E ++A ++LTG+Y+S + +IE P R P + P Sbjct: 621 ADHVIEIGPEPGARGGHVVFQGSVEKLLA-SDALTGRYLSNRLRIETPTTRRPCASPPPP 679 Query: 612 VLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAEPA 671 L +TG +NL+D+T+ LP+ ++GVSGSGKSTL+++ + + + +PA Sbjct: 680 FLTITGVTKHNLRDLTVKLPLRRLVALSGVSGSGKSTLLDNVIHQGLLAKRH-QLTEDPA 738 Query: 672 PYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESRARGYTPGRF 731 + G + +++ +DQSP+ RTPRSN A YT + +R+L+A P ++A GYT F Sbjct: 739 AIATLTGDDAIGEIVLVDQSPLSRTPRSNAALYTDAWELIRDLYAREPTAQAAGYTSSSF 798 Query: 732 SFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKYKGKTIHEVLDM 791 SFN GRCE CQG G +VEM FL D++VPC C+G+R+ E L I+++G ++ ++L+ Sbjct: 799 SFNAGDGRCEHCQGLGFERVEMQFLSDVFVPCPICEGRRFKPEVLAIRWRGHSVADLLNT 858 Query: 792 TIEEAREFF-----------DAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKL 840 +++A F + +LQ L DVGL Y+ LGQ TLSGGE+QR+KL Sbjct: 859 PVDDALALFAAAAADDAPNAKTHEKIHARLQPLADVGLGYLTLGQPLNTLSGGESQRLKL 918 Query: 841 AREL-----SKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVI 895 R L + + L +LDEPTTGLH D+++L+ VL +L D G++++VIEHNLDV+ Sbjct: 919 VRHLGNASGAAQTPTGALLLLDEPTTGLHRHDVKRLVGVLQRLVDAGHSVIVIEHNLDVL 978 Query: 896 KTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLKPML 940 K+ADW++++GPE GS GG I+ G PE +A+ + TA +L+ L Sbjct: 979 KSADWLIEIGPEAGSDGGRIVAEGPPERIAQT-DTATATYLRAAL 1022 Score = 449 bits (1154), Expect = e-124, Method: Composition-based stats. Identities = 213/652 (32%), Positives = 304/652 (46%), Gaps = 92/652 (14%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 63 + + GAR +NLKN+ L IP +L VVTG+SGSGKS+LAFD ++AEGQRR++ES+S YARQ Sbjct: 1052 LTLIGARENNLKNLTLTIPHRQLSVVTGVSGSGKSTLAFDIVFAEGQRRFMESMSPYARQ 1111 Query: 64 FLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCPDH 123 F+ + +P +D + G+ P ++IEQ+ T + +STV TITE+ YLRLL+AR+G PD Sbjct: 1112 FVEQLPRPAIDRLTGIPPTVAIEQRITRGSRKSTVATITEVAQYLRLLYARLGIQHHPDT 1171 Query: 124 DVPLAAQTVSQ---MVDNVLSQPEGKR---LMLLAPIIKERKGEHTKTLENLASQGYIRA 177 D P+ + Q ++ + L+ P +R L L AP+++ RKG H + Q Y Sbjct: 1172 DRPVQPLSPGQLKKLLADTLATPAARRAKHLYLCAPLVRGRKGHHQPIATWIGKQNYELM 1231 Query: 178 RIDGEVCDLSDPPKLELQKKHTIEVVVDRFKV----RDDLTQRLAE------------SF 221 R DG + KL+ K+H IE VV K+ ++ + Sbjct: 1232 RADGRILLTDTFQKLDRYKEHDIEAVVADLKLATLANPKNQNSKSQNKNLPPAAAASAAL 1291 Query: 222 ETALELSGGTAVVAD-----MDDPKAEELLFSANFACPICGYSMRELEPRLFSFNNPAGA 276 ALEL G+ +A FS G S EL+P+ FS N+P G Sbjct: 1292 TRALELGKGSCFLAIPATSSATGGSKILSWFSTTRTDIETGESFPELDPKHFSHNSPRGW 1351 Query: 277 CPTCDGLGVQQYFDPDRVIQNPELSLAGGAIRGW------DRRNFYYFQMLKSLADHYKF 330 CP C G G I W + + Sbjct: 1352 CPACRGHGR---------------------IYPWMLTAETADDDDRNSNDPAAQLRALGL 1390 Query: 331 DVEAPWGSLSANVHKV-VLYGSGKENIEFKYMNDRGDTSIRRHPFEGVLHNMERRYKETE 389 + + L+ +G I + F+ + R Sbjct: 1391 ETDD---ELTDEGTPCPACHGDRLNRIARAVKLHFTTAAAGIPTFD-----VGRSMLNVR 1442 Query: 390 SSAVREELAKFISNRPCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLA 449 SA R L+ + L ++ + + Sbjct: 1443 RSAHRAALSL----------------PQLLRATPAQL-LKNLTQLKLDE----------- 1474 Query: 450 GQRAKIAEKILKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVM 509 + +I + I+ +I +RL+FL +VGL YLTL R TLSGGEAQRIRLASQ+G L GV+ Sbjct: 1475 -RGRRITQDIVPQIEERLRFLDHVGLGYLTLDRPTGTLSGGEAQRIRLASQLGTNLAGVL 1533 Query: 510 YVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGG 569 YVLDEPSIGLH RDN+RL+ TL +LRD GNT++VVEHD++ + ADH+ID+GP AG+HGG Sbjct: 1534 YVLDEPSIGLHARDNDRLIETLKNLRDKGNTLLVVEHDDELMDHADHIIDLGPAAGIHGG 1593 Query: 570 EVVAEGPLEAIMAVPESLTGQYMSGKRKIEVPKKRVPANPEKVLKLTGARGN 621 E++AEG I SLTG +++ + P G Sbjct: 1594 ELLAEGTPADIKKNARSLTGLFLAKGIPHPLRGTYRDLPPAPQTTPPGKHKT 1645 Score = 249 bits (635), Expect = 5e-64, Method: Composition-based stats. Identities = 113/340 (33%), Positives = 171/340 (50%), Gaps = 29/340 (8%) Query: 404 RPCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEI 463 PC CEG R + E + + + + + A+ F + +I Sbjct: 828 VPCPICEGRRFKPEVLAIRWRGHSVADLLNTPVDDALALFAAAAADDAPNAKTHE---KI 884 Query: 464 GDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAG------LVGVMYVLDEPSI 517 RL+ L +VGL YLTL + TLSGGE+QR++L +G G + +LDEP+ Sbjct: 885 HARLQPLADVGLGYLTLGQPLNTLSGGESQRLKLVRHLGNASGAAQTPTGALLLLDEPTT 944 Query: 518 GLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPL 577 GLH+ D +RL+G L L D G++VIV+EH+ D +++AD +I+IGP AG GG +VAEGP Sbjct: 945 GLHRHDVKRLVGVLQRLVDAGHSVIVIEHNLDVLKSADWLIEIGPEAGSDGGRIVAEGPP 1004 Query: 578 EAIMAVPESLTGQYMSGKRK--IEVPKKRVPANPEK-----------VLKLTGARGNNLK 624 E I ++ T Y+ + + V + P + K L L GAR NNLK Sbjct: 1005 ERIAQT-DTATATYLRAALEEAVNVARASRPHDDAKRRPPPPPPPPAALTLIGARENNLK 1063 Query: 625 DVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAEPAPYRDIQGLEHFDK 684 ++TLT+P + +TGVSGSGKSTL D +F QR+ + + + D+ Sbjct: 1064 NLTLTIPHRQLSVVTGVSGSGKSTLAFDIVFAEGQRRFMESMSPYARQFVEQLPRPAIDR 1123 Query: 685 V------IDIDQSPIGRTPRSNPATYTGVFTPVRELFAGV 718 + + I+Q + +S AT T V +R L+A + Sbjct: 1124 LTGIPPTVAIEQRITRGSRKSTVATITEVAQYLRLLYARL 1163 Score = 179 bits (454), Expect = 5e-43, Method: Composition-based stats. Identities = 88/284 (30%), Positives = 122/284 (42%), Gaps = 70/284 (24%) Query: 726 YTPGRFSFNVRGGRCEACQGDGVIKVEMHF----------------------------LP 757 P FS N G C AC+G G I M L Sbjct: 1338 LDPKHFSHNSPRGWCPACRGHGRIYPWMLTAETADDDDRNSNDPAAQLRALGLETDDELT 1397 Query: 758 DIYVPCDQCKGKRYNRETLEIKYK-------------GKTIHEVL--------------- 789 D PC C G R NR +K G+++ V Sbjct: 1398 DEGTPCPACHGDRLNRIARAVKLHFTTAAAGIPTFDVGRSMLNVRRSAHRAALSLPQLLR 1457 Query: 790 -----------DMTIEEAREFF--DAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQ 836 + ++E D VP + +L+ L VGL Y+ L + TLSGGEAQ Sbjct: 1458 ATPAQLLKNLTQLKLDERGRRITQDIVPQIEERLRFLDHVGLGYLTLDRPTGTLSGGEAQ 1517 Query: 837 RVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIK 896 R++LA +L G LY+LDEP+ GLH D +L++ L LRD+GNT++V+EH+ +++ Sbjct: 1518 RIRLASQLGTNLAG-VLYVLDEPSIGLHARDNDRLIETLKNLRDKGNTLLVVEHDDELMD 1576 Query: 897 TADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLKPML 940 AD I+DLGP G GGE+L GTP + + S T FL + Sbjct: 1577 HADHIIDLGPAAGIHGGELLAEGTPADIKKNARSLTGLFLAKGI 1620 >UniRef50_B5JNR8 Excinuclease ABC, A subunit, putative n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JNR8_9BACT Length = 1476 Score = 966 bits (2498), Expect = 0.0, Method: Composition-based stats. Identities = 372/1023 (36%), Positives = 552/1023 (53%), Gaps = 99/1023 (9%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 63 I +RG R +NLKNI++ IP K I VTGLSG+GKSSL FDTL+AEGQRRYVE+ SAY RQ Sbjct: 12 IRLRGVRQNNLKNIDVDIPLGKFIAVTGLSGAGKSSLVFDTLHAEGQRRYVETFSAYTRQ 71 Query: 64 FLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCPDH 123 FL L+EKPD+D E + P+I+IEQK+T RSTVGT+TE+ D+ ++ F+ V P Sbjct: 72 FLDLLEKPDLDSAENVRPSIAIEQKNTIKTSRSTVGTMTELTDFFKVWFSHVAALYDPVT 131 Query: 124 DVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARIDGEV 183 + + + L+ + + L + K K + L+N+ +QGY R Sbjct: 132 NEQIHDDNPITIWQKSLATYSKQTVTLAFQVTKPEKLTWPEILKNIKAQGYSRLY--QTT 189 Query: 184 CDLSDPPKLEL------------QKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGT 231 + P+L T+ VV DR ++ + R E+ ETALE G Sbjct: 190 PKSASAPQLHRIETISEDSCNSWADNTTLHVVQDRIQLFNTNRSRFLEAAETALEFGQGQ 249 Query: 232 AVVADMDDPKAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDP 291 ++ +D S P G + R P LFSFN+P GACP C G G D Sbjct: 250 LLL--LDKNGDTLARHSRGLHSPTSGKTYRPASPPLFSFNSPIGACPKCRGFGRVIEIDY 307 Query: 292 DRVIQNPELSLAGGAIRGWDRRNFYYFQM-LKSLADHYKFDVEAPWGSLSANVHKVVLYG 350 I + S+A G I+ ++ + + + L K P+ L+ V+ G Sbjct: 308 RLAIPDTNKSIADGLIKPFEGQVYGESKNDLVRACKRLKIFTTKPFNKLTQRQQDNVILG 367 Query: 351 SGKENIEFKYMNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCE 410 ++ + ++ + +G +ER T VR L+++ + C C+ Sbjct: 368 EP----AYRKLPPGSESDGLWYGVKGFFDWLER---NTYKMHVRIFLSRYRAYVKCPDCQ 420 Query: 411 GTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLK---LAGQRAKIAEKILKE----- 462 GTRL+ ++ + LP + + + + + + A Q K I ++ Sbjct: 421 GTRLQPDSLCWKWQGYRLPDLYQLPVDQLLHLIESSQPKTQAPQTQKARNPIREDSSDSW 480 Query: 463 -----------------------------IGDRLKFLVNVGLNYLTLSRSAETLSGGEAQ 493 I RL++L +VGL YLTL+RSA TLSGGE + Sbjct: 481 AKNPLPSGATLEEFRDETPNHQATIASDAILSRLRYLDHVGLGYLTLNRSARTLSGGEVE 540 Query: 494 RIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRA 553 R+ L S +GA LV ++VLDEPS+GLH RD +RL+ + L D GNTV++VEHD+ IRA Sbjct: 541 RVNLTSCLGASLVDTLFVLDEPSVGLHARDIDRLIHIVRTLTDAGNTVVLVEHDDAMIRA 600 Query: 554 ADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEVP------------ 601 ADHVI+IGP G GG +V +G ++ +S+TGQY+SGK++I VP Sbjct: 601 ADHVIEIGPQPGAAGGHLVFQGTQAQLLKSRKSITGQYLSGKKQIPVPTQTRSVGSDLVS 660 Query: 602 ---------KKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLIND 652 + R + E L +T A +N++D++L++P+ F C++GVSGSGKSTL+N Sbjct: 661 RSTSTSSKARTRHSSKSEGGLHITSASKHNIQDLSLSIPLQRFVCLSGVSGSGKSTLLNA 720 Query: 653 TLFPIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVR 712 L+ Q G +PA + F+++ +DQSP+ RTPRSNP + + +R Sbjct: 721 VLYQNLIAQ-RGLIAEDPASVASLTTDLPFEEITLVDQSPVSRTPRSNPVVFVEAWDHIR 779 Query: 713 ELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYN 772 L+ +P+S GYT FSFN GRCE C+G G K+EM FL D+YVPC C GKR+ Sbjct: 780 TLYGKLPQSVENGYTASSFSFNAGDGRCEPCKGLGYEKIEMQFLSDVYVPCPHCDGKRFK 839 Query: 773 RETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSG 832 E LEI ++G I ++LD+TI++ + F+A P + KL L +VGL Y++ GQ TLSG Sbjct: 840 SELLEITHEGYNISQLLDLTIDQLLKLFEAYPKIHSKLAALEEVGLGYLKSGQPLNTLSG 899 Query: 833 GEAQRVKLARELSK---------------RGTGQTLYILDEPTTGLHFADIQQLLDVLHK 877 GE+QR+KL + LS + + +L +LDEPTTGLH D+++LL VL K Sbjct: 900 GESQRLKLVKYLSSSTRVNDSTHHSPLTTQNSTGSLILLDEPTTGLHKHDVRRLLTVLQK 959 Query: 878 LRDQGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLK 937 + D G++++VIEHN+DV+K+ADW++++GPE G+ GG+++ GTPET A+ + TA++L+ Sbjct: 960 IVDSGHSLIVIEHNIDVLKSADWLIEMGPEAGAKGGQVVFQGTPETCAQT-TTETAKYLQ 1018 Query: 938 PML 940 P Sbjct: 1019 PEF 1021 Score = 259 bits (661), Expect = 5e-67, Method: Composition-based stats. Identities = 105/246 (42%), Positives = 152/246 (61%), Gaps = 10/246 (4%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 63 + V GAR HNLKNI + IP + VVTG SGSGKS+LAFD ++ EGQRR++ES+S YARQ Sbjct: 1068 LTVTGARHHNLKNITVSIPHYEFTVVTGASGSGKSTLAFDIVFGEGQRRFMESMSPYARQ 1127 Query: 64 FLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCPDH 123 F+ + +PD+D + G+ P ++IEQ+ T + +STV TITE+ YLRLL++R+G P PD Sbjct: 1128 FVEQLPRPDLDQLTGIQPTVAIEQRVTRGSRKSTVATITEVAQYLRLLYSRLGIPHNPDS 1187 Query: 124 DVPLAAQTVSQM---VDNVLSQPEGKR---LMLLAPIIKERKGEHTKTLENLASQGYIRA 177 PL +QT +++ + +++ PE K+ L LLAP+I+ RKG H +A GY Sbjct: 1188 GAPLISQTETEIQKRLQKIITSPEAKKAKHLFLLAPLIRNRKGHHQPIANWIADHGYEMM 1247 Query: 178 RIDGEVCDLSDPPKLELQKKHTIEVVV-DRFKVRDDLTQRLAE---SFETALELSGGTAV 233 R+DG++ D KL+ K+H IEVV+ D + + + + AL GTA+ Sbjct: 1248 RVDGKLIFTDDFKKLDRYKEHNIEVVIADLKPLTGSGRSPIGQINRHLKEALHRGKGTAL 1307 Query: 234 VADMDD 239 V D Sbjct: 1308 VVFDDK 1313 Score = 233 bits (595), Expect = 2e-59, Method: Composition-based stats. Identities = 106/368 (28%), Positives = 166/368 (45%), Gaps = 67/368 (18%) Query: 403 NRPCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKE 462 PC C+G R + E + E + + D++I ++ F + Sbjct: 827 YVPCPHCDGKRFKSELLEITHEGYNISQLLDLTIDQLLKLFEAYP--------------K 872 Query: 463 IGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGL----------------V 506 I +L L VGL YL + TLSGGE+QR++L + + Sbjct: 873 IHSKLAALEEVGLGYLKSGQPLNTLSGGESQRLKLVKYLSSSTRVNDSTHHSPLTTQNST 932 Query: 507 GVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGV 566 G + +LDEP+ GLH+ D RLL L + D G+++IV+EH+ D +++AD +I++GP AG Sbjct: 933 GSLILLDEPTTGLHKHDVRRLLTVLQKIVDSGHSLIVIEHNIDVLKSADWLIEMGPEAGA 992 Query: 567 HGGEVVAEGPLEAIMAVPESLTGQYMSGK---------RKIEVPKK-------------R 604 GG+VV +G E + T +Y+ + K E+P Sbjct: 993 KGGQVVFQGTPETCAQTT-TETAKYLQPEFDSRTQISNLKSEIPNPTLLAAEAKSSYNSN 1051 Query: 605 VPANP--------EKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFP 656 P P L +TGAR +NLK++T+++P FT +TG SGSGKSTL D +F Sbjct: 1052 SPLTPHSSPLDGQSSALTVTGARHHNLKNITVSIPHYEFTVVTGASGSGKSTLAFDIVFG 1111 Query: 657 IAQRQLNGATIA------EPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTP 710 QR+ + E P D+ L + I+Q + +S AT T V Sbjct: 1112 EGQRRFMESMSPYARQFVEQLPRPDLDQLTGIQPTVAIEQRVTRGSRKSTVATITEVAQY 1171 Query: 711 VRELFAGV 718 +R L++ + Sbjct: 1172 LRLLYSRL 1179 Score = 91.5 bits (226), Expect = 1e-16, Method: Composition-based stats. Identities = 37/122 (30%), Positives = 59/122 (48%), Gaps = 6/122 (4%) Query: 603 KRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQL 662 +N ++L G R NNLK++ + +P+G F +TG+SG+GKS+L+ DTL QR+ Sbjct: 2 PTAASNKPTAIRLRGVRQNNLKNIDVDIPLGKFIAVTGLSGAGKSSLVFDTLHAEGQRRY 61 Query: 663 NGATIAEPAPYR------DIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFA 716 A + D+ E+ I I+Q +T RS T T + + F+ Sbjct: 62 VETFSAYTRQFLDLLEKPDLDSAENVRPSIAIEQKNTIKTSRSTVGTMTELTDFFKVWFS 121 Query: 717 GV 718 V Sbjct: 122 HV 123 >UniRef50_B1ZV20 Excinuclease ABC, A subunit n=5 Tax=Bacteria RepID=B1ZV20_OPITP Length = 1995 Score = 960 bits (2482), Expect = 0.0, Method: Composition-based stats. Identities = 366/995 (36%), Positives = 526/995 (52%), Gaps = 66/995 (6%) Query: 2 DKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYA 61 + I +RG R +NLK +L +P + I VTGLSG+GKSSL FDTL+AEGQRRYVE+ SAY Sbjct: 13 ECIRLRGVRQNNLKGFDLDVPLGRYIAVTGLSGAGKSSLVFDTLHAEGQRRYVETFSAYT 72 Query: 62 RQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCP 121 RQFL L+ KP VD IE + P+I+IEQ +T RSTVGT+TE+ D+ ++ F+ V E P Sbjct: 73 RQFLDLLNKPKVDSIENIRPSIAIEQTNTVKTSRSTVGTMTELTDFFKVWFSHVAECFDP 132 Query: 122 DHDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARIDG 181 + + + + + +++ + K + L+NL +Q Y+R + Sbjct: 133 ETGEKVEDDNPQSIWAKTSAAHPNRAVIVAFKVTKPANLTWPEILQNLKAQSYVRVLLAA 192 Query: 182 EVCDLSDPPKLEL------------------QKKHTIEVVVDRFKVRDDLTQRLAESFET 223 +PP+L + VV DR + R E+ ET Sbjct: 193 AAAATRNPPQLHRLEDLLSASSDPATIHPQLSGASELFVVQDRITIAAAEKPRFLEAVET 252 Query: 224 ALELSGGTAVVADMDDPKAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGL 283 AL G + D AE FS P G + R P LFSFN+P GACP C G Sbjct: 253 ALHFGQGQVHLFAAD-GFAELGHFSRGLHSPKTGRTFRAATPALFSFNSPLGACPHCRGF 311 Query: 284 GVQQYFDPDRVIQNPELSLAGGAIRGWDRRNFYYF-QMLKSLADHYKFDVEAPWGSLSAN 342 G D + + LS+ G I+ W+ + + L + P+ SL+ Sbjct: 312 GRVIEIDYRLAVPDQSLSIDQGVIKCWESEIYGESKKDLYVFTKKKRIPTNVPFASLTPE 371 Query: 343 VHKVVLYGSGKENIEFKYMNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFIS 402 V+ G Y + G T + + GV K T VR LA++ + Sbjct: 372 QRDYVINGEPG------YGEENGKTWPQY--WYGVKGFFRWLEKNTYKMHVRVFLARYRA 423 Query: 403 NRPCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLK-----LAGQRAKIAE 457 PC +C G RL+ EA + LP + + + + + +++ Sbjct: 424 YNPCPACGGQRLQPEALCWKWQGRTLPDLYQLPVSDLLAQLASKAARHGHDTARKSDSRS 483 Query: 458 KIL--KEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEP 515 + L I RL++L VGL YLTL R + TLSGGE +R+ L S +G LV ++VLDEP Sbjct: 484 ETLAYDSIVTRLRYLEQVGLGYLTLDRQSRTLSGGEVERVNLTSCLGTSLVDTLFVLDEP 543 Query: 516 SIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEG 575 S+GLH RD +RL+ + L + GNTV+VVEHDE IRAADHVI++GP G GG +V EG Sbjct: 544 SVGLHPRDIDRLIAIIRTLTNAGNTVVVVEHDEAMIRAADHVIEVGPEPGGRGGHIVFEG 603 Query: 576 PLEAIMAVPESLTGQYMSGKRKIEVPKKRVPAN------------------PEKVLKLTG 617 + ++ ES+TG Y SG+ IE P +R P + + L T Sbjct: 604 TVSEMLRSRESVTGAYFSGRETIETPARRRPVSLGARASRPQSANAAAPSSSPQWLTFTD 663 Query: 618 ARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIA--QRQLNGATIAEPAPYRD 675 +NL +T LP+G F C++GVSGSGKSTL+++ ++ QR AE Sbjct: 664 VSKHNLAHLTFRLPLGRFVCLSGVSGSGKSTLLDNVIYQGLLTQRLQLAEDPAEIKAITP 723 Query: 676 IQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESRARGYTPGRFSFNV 735 F +++ +DQSP+ +TPRSNPA Y+ + +REL+A P ++ G+ FSFN Sbjct: 724 APDTAPFGELVLVDQSPLSKTPRSNPALYSEAWELIRELYARTPAAQEAGFNSSSFSFNS 783 Query: 736 RGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEE 795 GRCE CQG G +VEM FL D++VPC C G+R+ E L I++ G+++ ++L +I + Sbjct: 784 GEGRCEHCQGLGYERVEMQFLSDVFVPCPICDGRRFKPEVLAIQWNGRSVADLLATSIND 843 Query: 796 AREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLAREL----SKRGTGQ 851 A F P + R+L L VGL Y+ LGQ TLSGGE+QR+KL R L ++ Sbjct: 844 ALPLFTEHPEIHRRLAALETVGLGYLTLGQPLNTLSGGESQRLKLVRYLGDYTAQEVGSP 903 Query: 852 ------TLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADWIVDLG 905 L +LDEPTTGLH D+++LL VLH L D+G+++VVIEHNLDV+K+ADW++++G Sbjct: 904 YPNSAGALLLLDEPTTGLHRHDVKRLLSVLHALVDRGHSVVVIEHNLDVLKSADWLIEIG 963 Query: 906 PEGGSGGGEILVSGTPETVAECEASHTARFLKPML 940 P+ G+ GG I+ GTPE VA + T+ FL+ L Sbjct: 964 PDAGANGGRIVAEGTPEDVAAA-NTATSPFLRAAL 997 Score = 596 bits (1537), Expect = e-168, Method: Composition-based stats. Identities = 264/619 (42%), Positives = 358/619 (57%), Gaps = 82/619 (13%) Query: 404 RPCASCEGTRLRREARHVYVE---------------------------NTPLPAISDMSI 436 +PC C G RL R AR V + LP + + Sbjct: 1369 QPCPECHGARLNRIARAVKLHFKAPGRRGRRAPARASQPSALNSQPTYALSLPELLTSTP 1428 Query: 437 GHAMEFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIR 496 H + L L + I + I+ +I +RL+FL +VGL YL+L R ETLSGGEAQRIR Sbjct: 1429 AHLLAHLRELDLDARGRLITQDIIPQIEERLRFLDHVGLGYLSLERPTETLSGGEAQRIR 1488 Query: 497 LASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADH 556 LA+Q+G+ L GV+YVLDEPSIGLH RDN+RL+ TL LR+ GNT++VVEHD++ + AD Sbjct: 1489 LAAQLGSNLSGVLYVLDEPSIGLHARDNDRLIETLQSLREKGNTLLVVEHDDELMERADR 1548 Query: 557 VIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEVPKKRVPAN-------- 608 +ID+GP AGVHGGE++A G I +SLTG ++ + + PA Sbjct: 1549 IIDLGPAAGVHGGELLANGTPAEIKRSAKSLTGLFLKKGIAHPLRGEYRPAMWHGRLARV 1608 Query: 609 --------------PEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTL 654 P++ L+L GA NLK L LP+G + G SG+GKSTL D L Sbjct: 1609 ATRAKAKLTGGTPVPQQWLELRGALFRNLKGFDLRLPLGRLIMVAGPSGAGKSTLFRDVL 1668 Query: 655 FPIAQRQLNG-----------------------ATIAEPAPYRDIQGLEHFDKVIDIDQS 691 P + +T++ P+ +++G F +VI++DQS Sbjct: 1669 DPAVSFAIKEQKASLTGREFVKATGFVVADSHLSTLSTQLPFAELRGANGFKRVIEVDQS 1728 Query: 692 PIGRTPRSNPATYTGVFTPVRELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKV 751 PIG+TPRS PATY G+F +R+ FA +PE++ RGYT RFSFN GGRC C+G G IK+ Sbjct: 1729 PIGKTPRSTPATYLGIFDLIRQFFASLPEAKIRGYTASRFSFNTTGGRCPTCEGAGRIKL 1788 Query: 752 EMHFLPDIYVPCDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQ 811 EM F+PD Y+PCD C G RY E +I +KGK+I EVL +T EEA +FFD LA+ Q Sbjct: 1789 EMAFMPDTYLPCDDCHGLRYGPELADITWKGKSIGEVLQLTFEEAAQFFDFHSQLAQVCQ 1848 Query: 812 TLMDVGLTYIRLGQSATTLSGGEAQRVKLAREL----------SKRGTGQTLYILDEPTT 861 ++D GL Y+ LGQS+ TLSGGEAQR+KL EL S+ + LY+L+EPT Sbjct: 1849 LMVDCGLGYLTLGQSSPTLSGGEAQRLKLVTELSAGLASYRERSRGERPRNLYLLEEPTI 1908 Query: 862 GLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTP 921 GLH +D ++L+ VLH L DQG+T++VIEH+LD++ AD+IV+LGP GG GGE+L G Sbjct: 1909 GLHLSDCEKLIRVLHSLVDQGHTVIVIEHHLDLLAEADYIVELGPVGGPDGGELLYQGEL 1968 Query: 922 ETVAECEASHTARFLKPML 940 + + S TA +L+ L Sbjct: 1969 AGLLKVRGSPTAPYLRAKL 1987 Score = 307 bits (786), Expect = 2e-81, Method: Composition-based stats. Identities = 128/330 (38%), Positives = 182/330 (55%), Gaps = 33/330 (10%) Query: 5 EVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQF 64 E+ GAR +NLKN+++ IP +L VVTG+SGSGKS+LAFD ++AEGQRR++ES+S YARQF Sbjct: 1037 EIEGARENNLKNLSVAIPHRQLSVVTGVSGSGKSTLAFDIVFAEGQRRFMESMSPYARQF 1096 Query: 65 LSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCPDHD 124 + + +P VD + G+ P ++IEQ+ T + +STV TITE+ YLRLL+AR+G P+ D Sbjct: 1097 VEQLPRPAVDRLTGIPPTVAIEQRVTRGSRKSTVATITEVAQYLRLLYARLGIQHHPETD 1156 Query: 125 VPLAAQTVSQ---MVDNVLSQPEGKR----LMLLAPIIKERKGEHTKTLENLASQGYIRA 177 P+ + +Q ++ VLS+ R L L AP+I+ RKG H +A+QGY Sbjct: 1157 QPVEPLSPAQLKSLLSRVLSENPKARKARHLYLCAPLIRGRKGHHQPIATWIANQGYELM 1216 Query: 178 RIDGEVCDLSDPPKLELQKKHTIEVVV---------DRFKVRDD------LTQRLAESFE 222 R DG++ + KL+ ++H IEVVV R K + + RL+E Sbjct: 1217 RADGQLTRVDAFQKLDRYREHDIEVVVADLKTGSPASRAKSKSSGSQLSAPSSRLSE--- 1273 Query: 223 TALELSGGTAVVADMDDPKAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDG 282 AL L G+ + + + FS G S EL+P+ FSFN+P G CPTC G Sbjct: 1274 -ALRLGKGSCFL--LTERGEILSWFSTTRTDIHTGESFPELDPKHFSFNSPRGWCPTCRG 1330 Query: 283 LGVQ----QYFDPDRVIQNPELSLAGGAIR 308 G D D +P L I Sbjct: 1331 HGRVFPWMLEPDEDA-EDDPAARLREFGID 1359 Score = 243 bits (621), Expect = 2e-62, Method: Composition-based stats. Identities = 107/354 (30%), Positives = 164/354 (46%), Gaps = 54/354 (15%) Query: 404 RPCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEI 463 PC C+G R + E + + + SI A+ F EI Sbjct: 809 VPCPICDGRRFKPEVLAIQWNGRSVADLLATSINDALPLFTE--------------HPEI 854 Query: 464 GDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGA-----------GLVGVMYVL 512 RL L VGL YLTL + TLSGGE+QR++L +G G + +L Sbjct: 855 HRRLAALETVGLGYLTLGQPLNTLSGGESQRLKLVRYLGDYTAQEVGSPYPNSAGALLLL 914 Query: 513 DEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVV 572 DEP+ GLH+ D +RLL L L D G++V+V+EH+ D +++AD +I+IGP AG +GG +V Sbjct: 915 DEPTTGLHRHDVKRLLSVLHALVDRGHSVVVIEHNLDVLKSADWLIEIGPDAGANGGRIV 974 Query: 573 AEGPLEAIMAVPESLTGQYMSGKRKIEVPKKR--------VPANPEKVL----------- 613 AEG E + A + T ++ + E + N L Sbjct: 975 AEGTPEDVAAA-NTATSPFLRAALEAESGGRTPELKAAESAARNGASALQPSTSNLNSIS 1033 Query: 614 ---KLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAEP 670 ++ GAR NNLK++++ +P + +TGVSGSGKSTL D +F QR+ + Sbjct: 1034 SSLEIEGARENNLKNLSVAIPHRQLSVVTGVSGSGKSTLAFDIVFAEGQRRFMESMSPYA 1093 Query: 671 APYRDIQGLEHFDKV------IDIDQSPIGRTPRSNPATYTGVFTPVRELFAGV 718 + + D++ + I+Q + +S AT T V +R L+A + Sbjct: 1094 RQFVEQLPRPAVDRLTGIPPTVAIEQRVTRGSRKSTVATITEVAQYLRLLYARL 1147 Score = 163 bits (412), Expect = 3e-38, Method: Composition-based stats. Identities = 69/206 (33%), Positives = 110/206 (53%), Gaps = 25/206 (12%) Query: 402 SNRPCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILK 461 + PC C G R E + + + + ++ A +FF+ Q A++ + Sbjct: 1796 TYLPCDDCHGLRYGPELADITWKGKSIGEVLQLTFEEAAQFFD---FHSQLAQVCQL--- 1849 Query: 462 EIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVG-----------VMY 510 +V+ GL YLTL +S+ TLSGGEAQR++L +++ AGL +Y Sbjct: 1850 --------MVDCGLGYLTLGQSSPTLSGGEAQRLKLVTELSAGLASYRERSRGERPRNLY 1901 Query: 511 VLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGE 570 +L+EP+IGLH D E+L+ L L D G+TVIV+EH D + AD+++++GP G GGE Sbjct: 1902 LLEEPTIGLHLSDCEKLIRVLHSLVDQGHTVIVIEHHLDLLAEADYIVELGPVGGPDGGE 1961 Query: 571 VVAEGPLEAIMAVPESLTGQYMSGKR 596 ++ +G L ++ V S T Y+ K Sbjct: 1962 LLYQGELAGLLKVRGSPTAPYLRAKL 1987 Score = 87.3 bits (215), Expect = 3e-15, Method: Composition-based stats. Identities = 37/120 (30%), Positives = 59/120 (49%), Gaps = 6/120 (5%) Query: 607 ANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGAT 666 + ++L G R NNLK L +P+G + +TG+SG+GKS+L+ DTL QR+ Sbjct: 9 RPAPECIRLRGVRQNNLKGFDLDVPLGRYIAVTGLSGAGKSSLVFDTLHAEGQRRYVETF 68 Query: 667 IAEPAPYRDI------QGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPE 720 A + D+ +E+ I I+Q+ +T RS T T + + F+ V E Sbjct: 69 SAYTRQFLDLLNKPKVDSIENIRPSIAIEQTNTVKTSRSTVGTMTELTDFFKVWFSHVAE 128 Score = 80.7 bits (198), Expect = 3e-13, Method: Composition-based stats. Identities = 37/137 (27%), Positives = 61/137 (44%), Gaps = 17/137 (12%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTL------------YAEGQR 51 +E+RGA NLK +L +P +LI+V G SG+GKS+L D L + R Sbjct: 1627 LELRGALFRNLKGFDLRLPLGRLIMVAGPSGAGKSTLFRDVLDPAVSFAIKEQKASLTGR 1686 Query: 52 RYVESLS-----AYARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHD 106 +V++ ++ + + ++ G I ++Q PRST T I D Sbjct: 1687 EFVKATGFVVADSHLSTLSTQLPFAELRGANGFKRVIEVDQSPIGKTPRSTPATYLGIFD 1746 Query: 107 YLRLLFARVGEPRCPDH 123 +R FA + E + + Sbjct: 1747 LIRQFFASLPEAKIRGY 1763 >UniRef50_A9G6R8 Excinuclease ABC subunit A n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9G6R8_SORC5 Length = 1781 Score = 955 bits (2470), Expect = 0.0, Method: Composition-based stats. Identities = 366/948 (38%), Positives = 520/948 (54%), Gaps = 43/948 (4%) Query: 1 MDKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAY 60 M I +RGARTHNL+ I+L +L+ + G+SG+GKSSLA DTLY+EGQRR+VES S Y Sbjct: 1 MHSICLRGARTHNLQGIDLDFRPGELVAIAGVSGAGKSSLALDTLYSEGQRRFVESFSPY 60 Query: 61 ARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRC 120 ARQFL +E+P + +E ++ +++++++ + RSTV T+ ++ Y LFAR P C Sbjct: 61 ARQFLERLERPPIGALEPVAAGVAVDRRAPVKSSRSTVATMADLEPYFCALFAREAVPVC 120 Query: 121 PDHDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARID 180 P + P A ++ D S EG ++ PI E+L + GY R + Sbjct: 121 PSCEAPAARTDPARAADLAASAHEGATALVTYPIAVAGTERFLDVRESLLAAGYRRLLVR 180 Query: 181 GEVCDLSDP-PKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVADM-- 237 GE D+ P + +EV+VDR +V +RL + E A + SGG A + Sbjct: 181 GEARDIDTVAPSEAMSGADKVEVIVDRVRVAPRERRRLGAAIEEAWKGSGGDASLHLQRK 240 Query: 238 ------DDPKAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDP 291 L ACP C + P LFS+ +P GACP+C G G D Sbjct: 241 ADEQGGQGAGPTRLRLVRGLACPSCARAFDPPRPGLFSYQSPTGACPSCRGFGRTLGIDY 300 Query: 292 DRVIQNPELSLAGGAIRGWDRRNF-YYFQMLKSLADHYKFDVEAPWGSLSANVHKVVLYG 350 D+VI +P S+AGGAIR W+ R+ + ++L++ + + PW LS +VL G Sbjct: 301 DKVIPDPSKSIAGGAIRPWNGRSTTWERKLLRAFCERNGIRTDKPWRDLSDAQRALVLEG 360 Query: 351 SGKENIEFKYMNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCE 410 G S + + GV T VR LA++ + C++C Sbjct: 361 EG---------------SWTQGKYPGVKAWFRWLETRTYKMHVRVLLARYRTYDVCSACN 405 Query: 411 GTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDRLKFL 470 G RL E+ V L A ++ + A L+ + E +E+ RL +L Sbjct: 406 GKRLAPESLLYRVGGLDLAAWHELELRDARA---RLEAERPQTGQGEMARRELIARLGYL 462 Query: 471 VNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGT 530 VGL YL+L+R A TLSGGEAQR+ L + +G L G ++VLDEP++GLH D L+ Sbjct: 463 ERVGLGYLSLARQARTLSGGEAQRVALTAALGTSLTGALFVLDEPTVGLHPTDIPPLIAA 522 Query: 531 LIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQ 590 + L D GN V+V+EH+ IRA+D V+++GPGAG GG V +G + + A Sbjct: 523 MRELADRGNAVLVIEHEPLVIRASDRVVELGPGAGKQGGRVTFDGRPDGLAA-------- 574 Query: 591 YMSGKRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLI 650 G ++R P+ + + GAR NNL+DVT+ +P+G+ ITG SGSGKSTL+ Sbjct: 575 --RGPLASARAERRAPSGK---IAIHGARENNLRDVTVDVPLGVVVAITGPSGSGKSTLV 629 Query: 651 NDTLFPIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTP 710 ND L+ R + P YR I+G V +DQ+P+GRT R NPATYTG + Sbjct: 630 NDVLYRHIARARGYKDVEAPGLYRRIEGTADIRTVTLVDQAPLGRTSRGNPATYTGAWNR 689 Query: 711 VRELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKR 770 +R LFA PE+ AR PG FSFNV GRCEAC G+G +EM FL D+ + C CKGKR Sbjct: 690 IRALFAEQPEASARDLGPGHFSFNVALGRCEACAGEGSETIEMQFLADVSLTCPTCKGKR 749 Query: 771 YNRETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTL 830 + E LE+K G+++ +VLD++I+EA E F PA+ R L L +GL Y+ LGQ +TL Sbjct: 750 FRDEVLEVKLDGRSVADVLDLSIDEAFEVFVGQPAIRRALAPLKQLGLGYLTLGQPLSTL 809 Query: 831 SGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEH 890 SGGEAQR+K+AR L + G L++LDEP+ GLH ++ L L L +G +++V++H Sbjct: 810 SGGEAQRLKIARALGEPCAG-ALFLLDEPSAGLHPEEVTHLNAALSVLVAEGASVIVVDH 868 Query: 891 NLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLKP 938 +LDVI ADW+VDLGP GS GG ++ GTPE VA A+ T L Sbjct: 869 DLDVIAAADWVVDLGPGAGSEGGSVVAEGTPEEVART-ATRTGVSLAE 915 Score = 581 bits (1499), Expect = e-164, Method: Composition-based stats. Identities = 263/541 (48%), Positives = 355/541 (65%), Gaps = 5/541 (0%) Query: 402 SNRPCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILK 461 + PC +C G+RL R V + S S+ A + L+ G RA IAE K Sbjct: 1240 TPDPCEACGGSRLAPIPRAVRLAGERYHQASGRSVAAAAAWARGLQFTGDRALIAEAPHK 1299 Query: 462 EIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQ 521 E+ RL F+ VGL YLTL R A TLSGGE QR+RLA+Q+G+GL G +YVLDEP+IGLH Sbjct: 1300 ELCRRLDFVCEVGLGYLTLDRRAATLSGGEMQRLRLAAQLGSGLTGALYVLDEPTIGLHP 1359 Query: 522 RDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIM 581 RD +RLLG L L +G+TV++VEHD D IRAADH+ID+GP G GG +VA GP A++ Sbjct: 1360 RDTDRLLGNLRRLAGMGSTVLMVEHDADTIRAADHLIDLGPSGGRKGGRIVAAGPSRAVL 1419 Query: 582 AVPESLTGQYMSGKRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGV 641 A P+S T + ++G+ + + P E ++L GAR +NL+ TL +P G T + GV Sbjct: 1420 ANPDSPTARALAGEDALLSARPARPPVREH-IELLGARAHNLQGDTLRIPAGRMTVVAGV 1478 Query: 642 SGSGKSTLINDTLFPIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNP 701 SGSGKSTLI L+P A+R L EP P++ ++ + + + +DQSPIGRTPRS P Sbjct: 1479 SGSGKSTLIQKVLYPAARRALE-LEAPEPGPHKALRLPKSILRAVAVDQSPIGRTPRSIP 1537 Query: 702 ATYTGVFTPVRELFAGVPESRARGYTPGRFSFNVR-GGRCEACQGDGVIKVEMHFLPDIY 760 AT+ GV+ VR+L+A P+++ RGY P RFSFN GGRC AC+G GVI EM FLPD+ Sbjct: 1538 ATFLGVWDEVRKLYAACPDAQVRGYGPARFSFNTASGGRCPACEGQGVIAHEMSFLPDVT 1597 Query: 761 VPCDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTY 820 PC+ C G R+ TL+++Y G ++ E+LD+T EEA E F A P + L T+ D+G+ Y Sbjct: 1598 TPCEACGGARFEPATLDVRYLGLSVGELLDLTAEEAVEVFAAHPKIRAPLSTMCDLGVGY 1657 Query: 821 IRLGQSATTLSGGEAQRVKLAREL-SKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLR 879 + +GQ + TLSGGEAQR+KLA EL + TLY+LDEPTTGLH AD+ +L+ VL +L Sbjct: 1658 LHIGQGSHTLSGGEAQRLKLAAELTAGARPKPTLYVLDEPTTGLHLADVTRLVRVLDRLV 1717 Query: 880 DQGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLKPM 939 ++G+T+V+IEH+ VI AD +V+LGPEGG+GGG I+ GTP VA + T LK + Sbjct: 1718 ERGDTLVIIEHHPAVIACADHVVELGPEGGAGGGRIVAEGTPREVARQP-TATGEVLKRI 1776 Query: 940 L 940 Sbjct: 1777 F 1777 Score = 303 bits (776), Expect = 2e-80, Method: Composition-based stats. Identities = 126/296 (42%), Positives = 180/296 (60%), Gaps = 9/296 (3%) Query: 3 KIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYAR 62 +IEV GAR HNL ++ VIP +++V+TG SGSGKS+LAFD ++AEGQRR++E+L+ YAR Sbjct: 957 RIEVEGAREHNLAEVSTVIPHGEIVVITGPSGSGKSTLAFDVVFAEGQRRFLETLTPYAR 1016 Query: 63 QFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCPD 122 QFL + +PDVD + G+ P+I++EQ++T STV T+TEI YLRLL+A+VGE RCPD Sbjct: 1017 QFLPTLPRPDVDRVTGVPPSIALEQRTTRSGANSTVATVTEIAHYLRLLYAKVGEARCPD 1076 Query: 123 HDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARIDGE 182 DVP+ A++ + +++S G R LLAP + RKG + A G RA DGE Sbjct: 1077 CDVPIEARSPDDVYRSLVST-RGAR-TLLAPAVVARKGTYLDVFTAAARAGITRALADGE 1134 Query: 183 VCDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVADMDDPKA 242 C PP+L+ +++H+I++V ++ R D R F+ AL G + + Sbjct: 1135 PCATDSPPRLDKRREHSIDLV--MYEGRMDGLDRAL--FDRALAFGRGAIKLV---GGRG 1187 Query: 243 EELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNP 298 E L S CP CG + EL+PR FSFN G C +C+G G + D +P Sbjct: 1188 GEQLLSTTRTCPRCGVGVPELDPRWFSFNTKQGRCASCEGTGASDFDDDALATPDP 1243 Score = 243 bits (621), Expect = 2e-62, Method: Composition-based stats. Identities = 120/395 (30%), Positives = 168/395 (42%), Gaps = 66/395 (16%) Query: 406 CASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGD 465 C +C+G R R E V ++ + + D+SI A E F I Sbjct: 742 CPTCKGKRFRDEVLEVKLDGRSVADVLDLSIDEAFEVFVG--------------QPAIRR 787 Query: 466 RLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNE 525 L L +GL YLTL + TLSGGEAQR+++A +G G +++LDEPS GLH + Sbjct: 788 ALAPLKQLGLGYLTLGQPLSTLSGGEAQRLKIARALGEPCAGALFLLDEPSAGLHPEEVT 847 Query: 526 RLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPE 585 L L L G +VIVV+HD D I AAD V+D+GPGAG GG VVAEG E + Sbjct: 848 HLNAALSVLVAEGASVIVVDHDLDVIAAADWVVDLGPGAGSEGGSVVAEGTPEEVARTA- 906 Query: 586 SLTGQYM------SGKRKIEVPKK------------------RVPANPEKVLKLTGARGN 621 + TG + G P++ + +++ GAR + Sbjct: 907 TRTGVSLAEWFAQRGDGGARRPRRGSAAAPAAPKPGKRGGAAARASLDRGRIEVEGAREH 966 Query: 622 NLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAEPAPYRDIQGLEH 681 NL +V+ +P G ITG SGSGKSTL D +F QR+ + Sbjct: 967 NLAEVSTVIPHGEIVVITGPSGSGKSTLAFDVVFAEGQRRFLETLTPYARQFLPTLPRPD 1026 Query: 682 FDKV------IDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESRARGYTPGRFSFNV 735 D+V I ++Q S AT T + +R L+A V E+ Sbjct: 1027 VDRVTGVPPSIALEQRTTRSGANSTVATVTEIAHYLRLLYAKVGEA-------------- 1072 Query: 736 RGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKR 770 RC C + +E D+Y +G R Sbjct: 1073 ---RCPDCD----VPIEARSPDDVYRSLVSTRGAR 1100 Score = 192 bits (488), Expect = 6e-47, Method: Composition-based stats. Identities = 83/226 (36%), Positives = 115/226 (50%), Gaps = 16/226 (7%) Query: 726 YTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKYKGKTI 785 P FSFN + GRC +C+G G + L PC+ C G R ++ G+ Sbjct: 1208 LDPRWFSFNTKQGRCASCEGTGASDFDDDALATPD-PCEACGGSRLAPIPRAVRLAGERY 1266 Query: 786 HEV--------------LDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLS 831 H+ L T + A L R+L + +VGL Y+ L + A TLS Sbjct: 1267 HQASGRSVAAAAAWARGLQFTGDRALIAEAPHKELCRRLDFVCEVGLGYLTLDRRAATLS 1326 Query: 832 GGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHN 891 GGE QR++LA +L TG LY+LDEPT GLH D +LL L +L G+T++++EH+ Sbjct: 1327 GGEMQRLRLAAQLGSGLTG-ALYVLDEPTIGLHPRDTDRLLGNLRRLAGMGSTVLMVEHD 1385 Query: 892 LDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLK 937 D I+ AD ++DLGP GG GG I+ +G V S TAR L Sbjct: 1386 ADTIRAADHLIDLGPSGGRKGGRIVAAGPSRAVLANPDSPTARALA 1431 Score = 88.8 bits (219), Expect = 1e-15, Method: Composition-based stats. Identities = 38/121 (31%), Positives = 55/121 (45%), Gaps = 12/121 (9%) Query: 2 DKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYA 61 + IE+ GAR HNL+ L IP ++ VV G+SGSGKS+L LY +R Sbjct: 1448 EHIELLGARAHNLQGDTLRIPAGRMTVVAGVSGSGKSTLIQKVLYPAARRALELEAPEPG 1507 Query: 62 RQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCP 121 + K + A++++Q PRS T + D +R L+A CP Sbjct: 1508 PHKALRLPK-------SILRAVAVDQSPIGRTPRSIPATFLGVWDEVRKLYAA-----CP 1555 Query: 122 D 122 D Sbjct: 1556 D 1556 >UniRef50_B3DZR5 Excinuclease ABC subunit A, ATPase n=1 Tax=Methylacidiphilum infernorum V4 RepID=B3DZR5_METI4 Length = 1840 Score = 955 bits (2468), Expect = 0.0, Method: Composition-based stats. Identities = 370/975 (37%), Positives = 542/975 (55%), Gaps = 47/975 (4%) Query: 1 MDKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAY 60 M+ I +R HNLKNI+L IP L V+TGLSGSGKSSLAFDTL+AEGQ RY+E+ Y Sbjct: 1 MESIRLRKISVHNLKNIDLDIPHSTLTVITGLSGSGKSSLAFDTLFAEGQSRYIETYPPY 60 Query: 61 ARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRC 120 RQFL +EKP + IEG+ PAI++EQ T+ N RSTV T+T I DYL+LL+ARV P C Sbjct: 61 IRQFLLRVEKPKAESIEGILPAIAVEQDRTTANSRSTVATMTGIADYLKLLYARVSIPIC 120 Query: 121 PDHDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARID 180 P P+ T +++ + S K ++ P+ + + L SQGY + +D Sbjct: 121 PRCRQPVKKSTPKGILELLFSAYLHKSFLIGYPVRFAPHTSFKEACQMLLSQGYSKIWLD 180 Query: 181 GEVCDLSDPPKLELQKK-HTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVADMDD 239 + + + L L I V+ KV + RL ES E + +L G ++ + Sbjct: 181 NRIVRIDEEFALPLPPDFQEILVIHSLEKVEYERESRLLESLEESFKLGRG--IIHTLFL 238 Query: 240 PKAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPE 299 P+ + L FS CP + + P LFSFNNP GACP+C G G D D+VI Sbjct: 239 PENQVLSFSNQLVCPQDKIAFEDPFPALFSFNNPKGACPSCHGFGRIISIDYDKVIPEKN 298 Query: 300 LSLAGGAIRGWDRRNFYYFQM-LKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKENIEF 358 LS+ GGAIR + +F ++Q+ L+ + + + + + +L G Sbjct: 299 LSVEGGAIRPFQSAHFAHWQIFLERMLKKRRISPSKKISAYDSREWEYLLKGED------ 352 Query: 359 KYMNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGTRLRREA 418 + DT I + + G+ K+T + +R L+++ C C+G+R ++ Sbjct: 353 --PSADPDTLIEQDLWCGLEGFFSILEKKTYQTHIRVFLSRYRLYTLCPDCQGSRFNKKT 410 Query: 419 RHVYV----ENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNVG 474 + + I + + L + Q K KI +EI RL +L ++G Sbjct: 411 LDYKIFFGQTPLSIGEFLHSPISELIPIVDKLDV-PQSDKATLKIKEEIASRLGYLDHIG 469 Query: 475 LNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHL 534 L YLTL R + TLSGGE +R L +G L ++VLDEP+IGLH +D+ RL+ + L Sbjct: 470 LGYLTLDRPSRTLSGGETRRANLTICLGNKLTHTLFVLDEPTIGLHPKDSSRLVELIKKL 529 Query: 535 RDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSG 594 RD GNTV+VVEHDE I+ AD+++++GPG G GGEVV G LE ++ +SLTG Y+SG Sbjct: 530 RDQGNTVVVVEHDETVIKNADYIVELGPGTGEEGGEVVYAGNLEGLLLKEDSLTGAYLSG 589 Query: 595 KRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTL 654 ++ + +P+KR K L++ A +NL + + +P+GLF +TGVSG GKS+L++D + Sbjct: 590 RKTLPLPQKRREPRQGK-LEIRKAHVHNLHGLDVDIPLGLFVTVTGVSGCGKSSLVHDII 648 Query: 655 FPIAQR--QLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVR 712 R +LN + + G E +VI+IDQ+PI +TPRSN A Y G++ VR Sbjct: 649 AHGLYRIKELNPPQGTFFSGRAHLNGWEKIGEVIEIDQTPIFKTPRSNIALYLGIWQYVR 708 Query: 713 ELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYN 772 +LFA E++++G G FS N GRC C G G K+EM FL D++VPC C+GKR+ Sbjct: 709 KLFASTDEAQSQGIGEGSFSMNSGDGRCPRCLGLGYEKIEMQFLSDVFVPCSVCEGKRFQ 768 Query: 773 RETLEIKYKGKTIHEVLDMTIEEAREFF-----------DAVPALARKLQTLMDVGLTYI 821 L I+Y+GK+I ++ +MT++EA FF + +L L +VGL Y+ Sbjct: 769 PPILAIRYRGKSIDQIFEMTVKEASLFFCPKQDNADPQSVLCKRIVDRLGMLSEVGLDYL 828 Query: 822 RLGQSATTLSGGEAQRVKLARELSKRGTGQT----------------LYILDEPTTGLHF 865 RLG LSGGE+QR+K+ L ++ G + ILDEPTTGLH Sbjct: 829 RLGHPLNQLSGGESQRLKILAILGEKHFGSPADPSPGKMKPGKDRQRIIILDEPTTGLHM 888 Query: 866 ADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVA 925 D+++L+ +L KL + GN+++V+EHNLDVI ++DW++DLGP GG GG+I+ G PET+A Sbjct: 889 DDVKRLIGLLQKLVELGNSLIVVEHNLDVILSSDWVIDLGPLGGKQGGKIIAQGPPETIA 948 Query: 926 ECEASHTARFLKPML 940 S T FL L Sbjct: 949 ATAGSFTGFFLNEKL 963 Score = 591 bits (1523), Expect = e-167, Method: Composition-based stats. Identities = 237/559 (42%), Positives = 351/559 (62%), Gaps = 24/559 (4%) Query: 406 CASCEGTRLRREARHVYV-----ENTP-LPAISDMSIGHAMEFFNNLKLAGQRAK-IAEK 458 C C+G R+ AR V + + P + + + I +++F +++ + + K I EK Sbjct: 1277 CPDCQGKRINLGARSVSLPWPLKGSKPTIDLLCSLPISLLLDYFKSIEPSSSQQKAIVEK 1336 Query: 459 ILKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIG 518 I+ I RLKF+ +GL+YL+L R A++LS GE QR+ L SQ+G+ L GV+Y+LDEP+IG Sbjct: 1337 IVPAIIKRLKFIEEMGLHYLSLDREAQSLSAGELQRLYLCSQLGSNLQGVLYILDEPTIG 1396 Query: 519 LHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLE 578 LH +N++LL L L+ GNT+++VEHD +A++ AD ++D+GPGAGV GGE++ EG Sbjct: 1397 LHPTENQKLLDCLEELKSKGNTLLIVEHDTEAMKRADKIVDLGPGAGVDGGEIIFEGNYS 1456 Query: 579 AIMAVPESLTGQYMSGKRKIEVP--KKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFT 636 ++ S T +Y+ + +R LK+ G R +NLKD+ + +P+G F Sbjct: 1457 QLLLCKNSTTARYLCRPMHHPLKGSDRRSCKEHPSWLKILGIRVHNLKDLDIEIPLGRFV 1516 Query: 637 CITGVSGSGKSTLINDTLFPIAQRQLNGATIA-EPAPYRDIQGLEHFDKVIDIDQSPIGR 695 I GVSGSGKSTL+ + +F ++ LN + + + + G E V +DQ+PIG+ Sbjct: 1517 VICGVSGSGKSTLLREVIFAAVKKLLNKSPKKIQKECWSKVIGAEALGDVCFVDQTPIGK 1576 Query: 696 TPRSNPATYTGVFTPVRELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHF 755 PRS P TY G+F +RELFA P SR RGYT RFS+N + GRC C+G+G I V M Sbjct: 1577 NPRSTPLTYLGLFDRIRELFAQTPLSRQRGYTKSRFSYNSKEGRCPDCEGNGTIPVSMPL 1636 Query: 756 LPDIYVPCDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMD 815 LP ++PC+ C+GKRYN +TLE++YK K+IH++L MT EA FF + L + L D Sbjct: 1637 LPLFFLPCESCEGKRYNPQTLEVRYKEKSIHDILCMTAAEACSFFSPIEKLHKPFSILCD 1696 Query: 816 VGLTYIRLGQSATTLSGGEAQRVKLARELSKRGT---------GQT-----LYILDEPTT 861 +GL+Y+RLGQ TLSGGEAQR+KLA++L G + LY+L+EPT Sbjct: 1697 IGLSYLRLGQPTPTLSGGEAQRIKLAKDLIAMEQKVIQKEFHWGPSRQSKILYLLEEPTI 1756 Query: 862 GLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTP 921 GLH ADI++ L + +L + G+T+VVIEH+ +VI AD++++LGP G GG+I+ G P Sbjct: 1757 GLHLADIEKFLHLCQRLVELGHTVVVIEHHPEVIAEADYVIELGPGAGEKGGKIIGQGPP 1816 Query: 922 ETVAECEASHTARFLKPML 940 E++A+ S TA FLK ++ Sbjct: 1817 ESLAKAANSPTAPFLKGVI 1835 Score = 303 bits (776), Expect = 2e-80, Method: Composition-based stats. Identities = 126/320 (39%), Positives = 187/320 (58%), Gaps = 10/320 (3%) Query: 3 KIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYAR 62 + +RGAR HNLK+I+L I +K V+TG+SGSGKS+LAFD L+AE +RR+++SLS Y R Sbjct: 985 TLSIRGARHHNLKSISLEIDLEKTTVLTGISGSGKSTLAFDVLFAESRRRFLDSLSGYGR 1044 Query: 63 QFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCPD 122 QF+ +EKP VD IEGL P+I+IEQ+ST +STVGT++EIH +LRLLFA+ G P PD Sbjct: 1045 QFIQSLEKPQVDDIEGLPPSIAIEQRSTIPGSKSTVGTLSEIHPFLRLLFAKTGIPFDPD 1104 Query: 123 HDVPLAAQTVSQMVDNVLSQP-EGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARIDG 181 Q+ +++ +V S ++L +LAP++++RKG ++ + +GY RIDG Sbjct: 1105 TLEEAIQQSPEEILSSVRSLLMPDRKLRILAPLVRDRKGLYSSLAKWAQKKGYPGFRIDG 1164 Query: 182 EVCDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVADMDDPK 241 + P+L K HTI++ + + L + LA++ TAL G V D+ + Sbjct: 1165 CWYEPGSFPRLSRFKNHTIDLWLGTVTAQSSLEE-LAKNVSTAL--GLGKESVIFFDETQ 1221 Query: 242 AEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFD--PDRVIQN-P 298 + L+S F CP G S L+PRLFSF++P G C C G G + + P + + Sbjct: 1222 NRDYLYSTKFHCPRSGKSFDALDPRLFSFHSPLGWCCRCLGNGKIEESEDQPPILCPDCQ 1281 Query: 299 ELSLAGGAIR---GWDRRNF 315 + GA W + Sbjct: 1282 GKRINLGARSVSLPWPLKGS 1301 Score = 248 bits (634), Expect = 6e-64, Method: Composition-based stats. Identities = 120/429 (27%), Positives = 191/429 (44%), Gaps = 61/429 (14%) Query: 348 LYGSGK--ENIEFKYMNDRGDTSIRRHPFEGVLHNMERRYKETESSAVR----------- 394 L G K E IE + G+ + + + T+ + + Sbjct: 672 LNGWEKIGEVIEIDQTPIFKTPRSNIALYLGIWQYVRKLFASTDEAQSQGIGEGSFSMNS 731 Query: 395 --------------EELAKFISNR--PCASCEGTRLRREARHVYVENTPLPAISDMSIGH 438 + +F+S+ PC+ CEG R + + + I +M++ Sbjct: 732 GDGRCPRCLGLGYEKIEMQFLSDVFVPCSVCEGKRFQPPILAIRYRGKSIDQIFEMTVKE 791 Query: 439 AMEFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLA 498 A FF + + + K I DRL L VGL+YL L LSGGE+QR+++ Sbjct: 792 ASLFFCPKQDNADPQSV---LCKRIVDRLGMLSEVGLDYLRLGHPLNQLSGGESQRLKIL 848 Query: 499 SQIGAGLVG-----------------VMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTV 541 + +G G + +LDEP+ GLH D +RL+G L L +LGN++ Sbjct: 849 AILGEKHFGSPADPSPGKMKPGKDRQRIIILDEPTTGLHMDDVKRLIGLLQKLVELGNSL 908 Query: 542 IVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEVP 601 IVVEH+ D I ++D VID+GP G GG+++A+GP E I A S TG +++ K K + P Sbjct: 909 IVVEHNLDVILSSDWVIDLGPLGGKQGGKIIAQGPPETIAATAGSFTGFFLNEKLKAKSP 968 Query: 602 KKR------VPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLF 655 P ++ L + GAR +NLK ++L + + T +TG+SGSGKSTL D LF Sbjct: 969 FLPSSSFYFTPPAKKQTLSIRGARHHNLKSISLEIDLEKTTVLTGISGSGKSTLAFDVLF 1028 Query: 656 PIAQRQLNGATIAEPAPY------RDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFT 709 ++R+ + + + +E I I+Q +S T + + Sbjct: 1029 AESRRRFLDSLSGYGRQFIQSLEKPQVDDIEGLPPSIAIEQRSTIPGSKSTVGTLSEIHP 1088 Query: 710 PVRELFAGV 718 +R LFA Sbjct: 1089 FLRLLFAKT 1097 Score = 178 bits (451), Expect = 1e-42, Method: Composition-based stats. Identities = 83/236 (35%), Positives = 123/236 (52%), Gaps = 26/236 (11%) Query: 726 YTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKYK---- 781 P FSF+ G C C G+G I+ + C C+GKR N + Sbjct: 1243 LDPRLFSFHSPLGWCCRCLGNGKIEES---EDQPPILCPDCQGKRINLGARSVSLPWPLK 1299 Query: 782 --GKTIHEVLDMTIEEAREFFDA---------------VPALARKLQTLMDVGLTYIRLG 824 TI + + I ++F + VPA+ ++L+ + ++GL Y+ L Sbjct: 1300 GSKPTIDLLCSLPISLLLDYFKSIEPSSSQQKAIVEKIVPAIIKRLKFIEEMGLHYLSLD 1359 Query: 825 QSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNT 884 + A +LS GE QR+ L +L G LYILDEPT GLH + Q+LLD L +L+ +GNT Sbjct: 1360 REAQSLSAGELQRLYLCSQLGSNLQG-VLYILDEPTIGLHPTENQKLLDCLEELKSKGNT 1418 Query: 885 IVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFL-KPM 939 ++++EH+ + +K AD IVDLGP G GGEI+ G + C+ S TAR+L +PM Sbjct: 1419 LLIVEHDTEAMKRADKIVDLGPGAGVDGGEIIFEGNYSQLLLCKNSTTARYLCRPM 1474 Score = 166 bits (420), Expect = 4e-39, Method: Composition-based stats. Identities = 68/205 (33%), Positives = 106/205 (51%), Gaps = 29/205 (14%) Query: 405 PCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIG 464 PC SCEG R + V + + I M+ A FF+ ++ ++ Sbjct: 1643 PCESCEGKRYNPQTLEVRYKEKSIHDILCMTAAEACSFFSPIE--------------KLH 1688 Query: 465 DRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIG---------------AGLVGVM 509 L ++GL+YL L + TLSGGEAQRI+LA + + ++ Sbjct: 1689 KPFSILCDIGLSYLRLGQPTPTLSGGEAQRIKLAKDLIAMEQKVIQKEFHWGPSRQSKIL 1748 Query: 510 YVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGG 569 Y+L+EP+IGLH D E+ L L +LG+TV+V+EH + I AD+VI++GPGAG GG Sbjct: 1749 YLLEEPTIGLHLADIEKFLHLCQRLVELGHTVVVIEHHPEVIAEADYVIELGPGAGEKGG 1808 Query: 570 EVVAEGPLEAIMAVPESLTGQYMSG 594 +++ +GP E++ S T ++ G Sbjct: 1809 KIIGQGPPESLAKAANSPTAPFLKG 1833 Score = 100 bits (250), Expect = 3e-19, Method: Composition-based stats. Identities = 34/112 (30%), Positives = 59/112 (52%), Gaps = 5/112 (4%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 63 +++ G R HNLK++++ IP + +V+ G+SGSGKS+L + ++A ++ +S + Sbjct: 1493 LKILGIRVHNLKDLDIEIPLGRFVVICGVSGSGKSTLLREVIFAAVKKLLNKS-----PK 1547 Query: 64 FLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARV 115 + V E L ++Q NPRST T + D +R LFA+ Sbjct: 1548 KIQKECWSKVIGAEALGDVCFVDQTPIGKNPRSTPLTYLGLFDRIRELFAQT 1599 >UniRef50_Q2T972 Excinuclease ABC, subunit A, form 2 n=56 Tax=Bacteria RepID=Q2T972_BURTA Length = 2021 Score = 955 bits (2468), Expect = 0.0, Method: Composition-based stats. Identities = 369/1001 (36%), Positives = 532/1001 (53%), Gaps = 87/1001 (8%) Query: 2 DKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYA 61 + I +RGAR HNLK+I+L + ++ VVTG SGSGKSSL FDTLYAEGQRRYVE+ SAYA Sbjct: 55 NLIRIRGARQHNLKHIDLDLRTGEMTVVTGPSGSGKSSLVFDTLYAEGQRRYVETFSAYA 114 Query: 62 RQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCP 121 RQFL M++P V+ ++G+ PAI+I+Q + + RSTVGT+TE++D+L+LL+AR E Sbjct: 115 RQFLDRMDRPQVERVDGVPPAIAIDQTNPVRSSRSTVGTMTELNDHLKLLYARAAELFDR 174 Query: 122 DHDVPLAAQTVSQMVDNVLSQ--PEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARI 179 + T + ++L++ R+ + + + + L++ GY R + Sbjct: 175 RTARLVRHDTPETIYADLLARTKEHDPRIAITFAVELPETATDDEVEQWLSASGYTRVQA 234 Query: 180 DGEVCDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVADMDD 239 EV + P K+ ++VV DRF++ R E+ E +L+ GG V + Sbjct: 235 RREVASPTGPRKV-------LDVVADRFRLHQVDKARAIEAIEASLKRGGGRVNVYVLAQ 287 Query: 240 ---------PKAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFD 290 +++ +S P + + LFSFN+ GAC C G G D Sbjct: 288 VPENANDAAAQSQVWRYSTGLHDPDSDLRYADPQAALFSFNSAYGACEACRGFGRVIGVD 347 Query: 291 PDRVIQNPELSLAGGAIRGWDRRNFYYFQ-MLKSLADHYKFDVEAPWGSLSANVHKVVLY 349 VI + +L GGAI+ + Q L A + PW L+ + V+ Sbjct: 348 LGLVIPDARKTLRGGAIKPMQTPAWKECQDDLMRYAAKANIRRDTPWAELTPDEQDWVIN 407 Query: 350 GSGKENIEFKYMNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASC 409 GS N +++ + GV + +R L+K+ S PCA C Sbjct: 408 GSPDWNGKWQSQ------------WYGVKRFFGYLESKAYKMHIRVLLSKYRSYTPCAVC 455 Query: 410 EGTRLRREARHVYVE-------------------------------NTPLPAISDMSIGH 438 G RL+ E+ + + + + I Sbjct: 456 GGARLKTESLLWRLGTKANADAVLASADRFMPRGVEWTRAQLEALPGLTVHDLMLLPIER 515 Query: 439 AMEFFNNLKL-AGQRAKIAEKILKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRL 497 FF+++ L + + +L E+ RLK+L +VGL YLTL R + TLSGGE QRI L Sbjct: 516 IRRFFDDVSLPSALLDDALKLLLAEVRTRLKYLCDVGLGYLTLDRQSRTLSGGEVQRINL 575 Query: 498 ASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHV 557 + +G L ++VLDEPSIGLH RD R++ + LRD GNT++VVEHD + AAD + Sbjct: 576 TTALGTSLTKTLFVLDEPSIGLHPRDLNRIVEAMQRLRDAGNTLVVVEHDPSVMLAADRL 635 Query: 558 IDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEVPK---KRVPANPEKVLK 614 ID+GPG G GG +V +G I +LTG+Y+ G++++ +R + Sbjct: 636 IDMGPGPGERGGTIVYDGTPGDI-RSAHTLTGEYLGGRKQVAHASHWVRRPVDARTPRIV 694 Query: 615 LTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAEPAPYR 674 L GA +NL+DVT+ +P+ C+TGVSGSGKSTL+ D L+P R G P +R Sbjct: 695 LEGASEHNLRDVTVEIPLQRLVCVTGVSGSGKSTLLQDVLYPAMARHF-GKATESPGAHR 753 Query: 675 DIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESRARGYTPGRFSFN 734 + G E V+ +DQSPIG+T RSNPA+Y G F +R+LFA P + RGY G FSFN Sbjct: 754 GLMGAEQVGDVVFVDQSPIGKTTRSNPASYVGAFDEIRKLFAKAPLALQRGYGAGTFSFN 813 Query: 735 VRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKY----KGKTIHEVLD 790 GRC C G G +EM FL D+Y+ C C G+RY E L+++ + ++ +VL+ Sbjct: 814 SGDGRCPTCGGSGFEHIEMQFLSDVYLRCPDCDGRRYRAEILDVRIERGGRALSVADVLE 873 Query: 791 MTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSK---- 846 +T+ EA F A + R LQ ++DVGL Y++LGQ TLSGGEAQR+KLA L++ Sbjct: 874 LTVSEAAACFAADAEVLRVLQPIVDVGLEYVKLGQPVPTLSGGEAQRLKLAGFLAESAKA 933 Query: 847 -----------RGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVI 895 R L++ DEPTTGLHF DI +L+ KL G++++VIEHNLDVI Sbjct: 934 GNGRRVVTQEARVARARLFMFDEPTTGLHFDDIAKLMRAFGKLLAAGHSLIVIEHNLDVI 993 Query: 896 KTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFL 936 + ADW++DLGPEGG GGG +L +GTP+ V C SHT L Sbjct: 994 RAADWLIDLGPEGGDGGGLVLCAGTPDDVKACAGSHTGAAL 1034 Score = 631 bits (1628), Expect = e-179, Method: Composition-based stats. Identities = 281/606 (46%), Positives = 374/606 (61%), Gaps = 60/606 (9%) Query: 395 EELAKFISNRPCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAK 454 E+ + + + PC C GTRL AR V + + ++ ++ + + L+LAG+ A+ Sbjct: 1397 EQEPEGVGDEPCPDCGGTRLNPSARAVTFDRHSIVDVAQWTVSDTRRWIDGLRLAGRDAQ 1456 Query: 455 IAEKILKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDE 514 IA I+ EIG RL FL VGL YL+L R+A +LSGGEAQRIRLA+Q+G+ L GV YVLDE Sbjct: 1457 IARDIVGEIGSRLAFLEEVGLGYLSLDRAAPSLSGGEAQRIRLAAQLGSNLQGVCYVLDE 1516 Query: 515 PSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAE 574 P+IGLH RDN+ LL L L D GNT++VVEHDED IR ADH+IDIGPGAG GG +VA+ Sbjct: 1517 PTIGLHPRDNQILLDALRKLGDKGNTLVVVEHDEDTIRRADHIIDIGPGAGKRGGALVAQ 1576 Query: 575 GPLEAIMAVPESLTGQYMSGKRKIEVPKKRV---------PANPEKVLKLTGARGNNLKD 625 G + + A P S+TG+ ++ + +R PA P+ L + GA +NL+ Sbjct: 1577 GGVADLSAQPASVTGRLLAQPMTHPLQPRRSVNPPGKRNGPAVPQTWLTVHGALLHNLRG 1636 Query: 626 VTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAEPAPYR----------- 674 VT+ +P+ +TGVSGSGKSTL D L + + ++ PA R Sbjct: 1637 VTVGIPLARLVAVTGVSGSGKSTLARDVLMTNLLDAVGRSVLSSPATRRARKAAQQQAPQ 1696 Query: 675 -------------------------------DIQGLEHFDKVIDIDQSPIGRTPRSNPAT 703 I G E D+V+++DQ+PIG+TPRS PAT Sbjct: 1697 AAQVTKGRASVLARSAPRPALNVTHAWQGCESISGWEQIDRVLEVDQTPIGKTPRSCPAT 1756 Query: 704 YTGVFTPVRELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPC 763 Y GV+ +R LFA E+RARGYT RFSFN GRC AC+G GV + M FLPD+ VPC Sbjct: 1757 YIGVWDTIRRLFADTLEARARGYTASRFSFNTGEGRCPACEGQGVRTIGMSFLPDVKVPC 1816 Query: 764 DQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRL 823 D C G+R+N ETL + ++G+ I +VL M I+EA EFF + +A LQ + DVGL Y+ L Sbjct: 1817 DVCHGQRFNPETLAVTWRGRNIGDVLTMEIDEAVEFFAPISNIAHPLQLMKDVGLGYLTL 1876 Query: 824 GQSATTLSGGEAQRVKLARELSK---------RGTGQTLYILDEPTTGLHFADIQQLLDV 874 GQ + TLSGGEAQR+KL ELSK + TLY+LDEPT GLH AD+ +L+ V Sbjct: 1877 GQPSPTLSGGEAQRIKLVTELSKVRDDITRRGQKAPHTLYVLDEPTVGLHMADVAKLIRV 1936 Query: 875 LHKLRDQGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTAR 934 LH+L D G+++VVIEH+LDVI ADWI+DLGPEGG+GGG I+ + PE + + ASHT R Sbjct: 1937 LHRLVDAGHSVVVIEHDLDVIAEADWIIDLGPEGGAGGGAIVAAAPPEALVKAGASHTGR 1996 Query: 935 FLKPML 940 L+P+L Sbjct: 1997 ALEPVL 2002 Score = 304 bits (778), Expect = 1e-80, Method: Composition-based stats. Identities = 113/297 (38%), Positives = 169/297 (56%), Gaps = 13/297 (4%) Query: 2 DKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYA 61 D + + AR HNLK++++ IP K VVTG+SGSGKS+LAFD L+ EGQRRY+ESL+AYA Sbjct: 1071 DVVRIVNAREHNLKSLDVDIPHGKFNVVTGVSGSGKSTLAFDILFHEGQRRYLESLNAYA 1130 Query: 62 RQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCP 121 R + +P+VD + G+ P ++IEQ+ + +STV T +E+ +LRLL+ ++G C Sbjct: 1131 RSIVQPAGRPEVDAVYGIPPTVAIEQRLSRGGRKSTVATTSEVWHFLRLLYVKLGLQHCI 1190 Query: 122 DHDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARIDG 181 P+ +QTV +V +L G+ + LLAP++ RKG +T + ++G R+DG Sbjct: 1191 HDGAPVTSQTVESIVAQLLRDHRGEHVGLLAPLVVNRKGVYTDLAKWAKARGNTHLRVDG 1250 Query: 182 EVCDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVADMDDPK 241 E + PKL+ ++HTIE+ V V + L + + LEL G + D Sbjct: 1251 EFVTVDPWPKLDRFREHTIELPVADLVVSPENEAGLRQRLDETLELGKGVMHLLAPLDGL 1310 Query: 242 -------------AEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGV 285 E + S ACP+CG S EL+PR+FS+N+ G C TC G G+ Sbjct: 1311 SHAMANRLSTARVGEIKVLSVKRACPVCGTSYPELDPRMFSYNSKHGWCATCVGTGL 1367 Score = 202 bits (513), Expect = 6e-50, Method: Composition-based stats. Identities = 104/356 (29%), Positives = 156/356 (43%), Gaps = 50/356 (14%) Query: 403 NRPCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKE 462 C C+G R R E V +E G A+ + L+L A E Sbjct: 839 YLRCPDCDGRRYRAEILDVRIERG----------GRALSVADVLELTVSEAAACFAADAE 888 Query: 463 IGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGL----------------V 506 + L+ +V+VGL Y+ L + TLSGGEAQR++LA + Sbjct: 889 VLRVLQPIVDVGLEYVKLGQPVPTLSGGEAQRLKLAGFLAESAKAGNGRRVVTQEARVAR 948 Query: 507 GVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGV 566 +++ DEP+ GLH D +L+ L G+++IV+EH+ D IRAAD +ID+GP G Sbjct: 949 ARLFMFDEPTTGLHFDDIAKLMRAFGKLLAAGHSLIVIEHNLDVIRAADWLIDLGPEGGD 1008 Query: 567 HGGEVVAEGPLEAIMAVPESLTGQYMSGKRK------------------IEVPKKRVPAN 608 GG V+ G + + A S TG + + + + R Sbjct: 1009 GGGLVLCAGTPDDVKACAGSHTGAALLHYDRAMGAEAELAEQGAPLQAVLSAARARRAIE 1068 Query: 609 PEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIA 668 E V+++ AR +NLK + + +P G F +TGVSGSGKSTL D LF QR+ + A Sbjct: 1069 GEDVVRIVNAREHNLKSLDVDIPHGKFNVVTGVSGSGKSTLAFDILFHEGQRRYLESLNA 1128 Query: 669 EPAPYRDIQGLEHFDKV------IDIDQSPIGRTPRSNPATYTGVFTPVRELFAGV 718 G D V + I+Q +S AT + V+ +R L+ + Sbjct: 1129 YARSIVQPAGRPEVDAVYGIPPTVAIEQRLSRGGRKSTVATTSEVWHFLRLLYVKL 1184 Score = 172 bits (436), Expect = 6e-41, Method: Composition-based stats. Identities = 83/296 (28%), Positives = 122/296 (41%), Gaps = 51/296 (17%) Query: 353 KENIEFKYMNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREE-LAKF----------- 400 +E + GV + R + +T + R ++F Sbjct: 1736 DRVLEVDQTPIGKTPRSCPATYIGVWDTIRRLFADTLEARARGYTASRFSFNTGEGRCPA 1795 Query: 401 ----------IS-----NRPCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNN 445 +S PC C G R E V + + M I A+EFF Sbjct: 1796 CEGQGVRTIGMSFLPDVKVPCDVCHGQRFNPETLAVTWRGRNIGDVLTMEIDEAVEFFAP 1855 Query: 446 LKLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQI---- 501 + I L+ + +VGL YLTL + + TLSGGEAQRI+L +++ Sbjct: 1856 IS--------------NIAHPLQLMKDVGLGYLTLGQPSPTLSGGEAQRIKLVTELSKVR 1901 Query: 502 ------GAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAAD 555 G +YVLDEP++GLH D +L+ L L D G++V+V+EHD D I AD Sbjct: 1902 DDITRRGQKAPHTLYVLDEPTVGLHMADVAKLIRVLHRLVDAGHSVVVIEHDLDVIAEAD 1961 Query: 556 HVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEVPKKRVPANPEK 611 +ID+GP G GG +VA P EA++ S TG+ + R P + Sbjct: 1962 WIIDLGPEGGAGGGAIVAAAPPEALVKAGASHTGRALEPVLARTGVNYREPVQGGE 2017 Score = 100 bits (249), Expect = 3e-19, Method: Composition-based stats. Identities = 39/138 (28%), Positives = 64/138 (46%), Gaps = 6/138 (4%) Query: 589 GQYMSGKRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKST 648 + + ++ + ++++ GAR +NLK + L L G T +TG SGSGKS+ Sbjct: 33 AAFRLPRTLANSFRRAGKLSSSNLIRIRGARQHNLKHIDLDLRTGEMTVVTGPSGSGKSS 92 Query: 649 LINDTLFPIAQRQLNGATIAEPAPYRDIQGLEHFDKV------IDIDQSPIGRTPRSNPA 702 L+ DTL+ QR+ A + D ++V I IDQ+ R+ RS Sbjct: 93 LVFDTLYAEGQRRYVETFSAYARQFLDRMDRPQVERVDGVPPAIAIDQTNPVRSSRSTVG 152 Query: 703 TYTGVFTPVRELFAGVPE 720 T T + ++ L+A E Sbjct: 153 TMTELNDHLKLLYARAAE 170 Score = 77.3 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 44/174 (25%), Positives = 64/174 (36%), Gaps = 53/174 (30%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLY-----AEGQRRYVESLS 58 + V GA HNL+ + + IP +L+ VTG+SGSGKS+LA D L A G+ + Sbjct: 1624 LTVHGALLHNLRGVTVGIPLARLVAVTGVSGSGKSTLARDVLMTNLLDAVGRSVLSSPAT 1683 Query: 59 AYARQ-------------------FLSLMEKPD---------VDHIEG---LSPAISIEQ 87 AR+ +P + I G + + ++Q Sbjct: 1684 RRARKAAQQQAPQAAQVTKGRASVLARSAPRPALNVTHAWQGCESISGWEQIDRVLEVDQ 1743 Query: 88 KSTSHNPRSTVGTITEIHDYLRLLFA-----------------RVGEPRCPDHD 124 PRS T + D +R LFA GE RCP + Sbjct: 1744 TPIGKTPRSCPATYIGVWDTIRRLFADTLEARARGYTASRFSFNTGEGRCPACE 1797 >UniRef50_Q1D9R5 UvrABC system, A protein n=2 Tax=Cystobacterineae RepID=Q1D9R5_MYXXD Length = 1767 Score = 942 bits (2436), Expect = 0.0, Method: Composition-based stats. Identities = 344/939 (36%), Positives = 511/939 (54%), Gaps = 27/939 (2%) Query: 1 MDKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAY 60 M K + GARTHNLK++++ + + + VTG+SG+GKSSLA DTLYAEGQRR+VES S Y Sbjct: 1 MHKTHLVGARTHNLKDLSVDLSEGEFVCVTGVSGAGKSSLALDTLYAEGQRRFVESFSPY 60 Query: 61 ARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRC 120 ARQFL +E+P +D +E ++ +++++++ + RSTV T+ ++ YL LF R P C Sbjct: 61 ARQFLERLERPPMDALEPVAAGVAVDRRAPVKSSRSTVATLADVEPYLSALFTREAVPVC 120 Query: 121 PDHDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARID 180 V + + + +L P+ L GY R + Sbjct: 121 GTCGVEAVRTDARVAAAAAIREHTDAQAILTFPLRIPDTAAFLDARARLLKDGYHRLMVQ 180 Query: 181 GEVCDLSDPPKLELQKKHTIE-VVVDRFKVRDDLTQRLAESFETALELSGGTAVVADMDD 239 GEV +L E I VVVDR K+ + R+ ++ E A + G A + Sbjct: 181 GEVKELESLRPAEATDPAGIARVVVDRVKLTNAQLSRVTQALEDAWNRADGEAHLFVP-- 238 Query: 240 PKAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPE 299 ++ CP C P LFS+ +P GAC C G G D +VI NPE Sbjct: 239 GQSVPQRLRRGLVCPKCAREFEAARPGLFSYQSPVGACAACRGFGRTIGIDWGKVIPNPE 298 Query: 300 LSLAGGAIRGWDR-RNFYYFQMLKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKENIEF 358 LSL+ GAIR W + ML+ + PWG L+ + VL G G Sbjct: 299 LSLSEGAIRPWSGQSTTWERGMLQRWCKARGIPWDKPWGLLTPEQRESVLEGEGD----- 353 Query: 359 KYMNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGTRLRREA 418 + GV T VR LA++ + C SC G RL +A Sbjct: 354 ---------YDEGRAYPGVRAWFRWMEGRTYKMHVRVLLARYRAYTLCESCGGGRLNAQA 404 Query: 419 RHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNVGLNYL 478 R V LP+ + + A+ + L+ + ++A + E+ RL++L VGL YL Sbjct: 405 RAYRVGGLDLPSWHHLELTDALARLDALRTITGQGELARR---ELAGRLRYLQRVGLGYL 461 Query: 479 TLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLG 538 TL R A TLSGGEAQR+ L + +G L G ++VLDEP++GLH D L + L + G Sbjct: 462 TLDRPARTLSGGEAQRVSLTAALGTSLTGALFVLDEPTVGLHPGDVPPLTEAIAELAERG 521 Query: 539 NTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKI 598 N +V+EHD IR+A V+++GPGAG GG +V +G EA+ + TG+ ++G ++ Sbjct: 522 NIALVIEHDPLVIRSAHRVLELGPGAGKQGGRLVFDGTPEALAKKQDLPTGRLLAGVDEV 581 Query: 599 EVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIA 658 R P L + GAR +NLKD+T+ +P+G+ +TG SGSGKSTL+++ L+ Sbjct: 582 P----RTPRTRTGALVIRGAREHNLKDLTVEVPLGVLCAVTGPSGSGKSTLMDEVLYRHL 637 Query: 659 QRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGV 718 R+L + P ++G+E + +DQSP+GRT R N ATYT + +RE FA Sbjct: 638 ARRLGVKDVEAPGAVDAVEGMEAVKAITLVDQSPLGRTSRGNAATYTKAWDRLRERFASE 697 Query: 719 PESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEI 778 P++ RG T FSFNV GRCEAC G+G VEM FL D+ + C C+G+R+ E L + Sbjct: 698 PDAEVRGLTAAHFSFNVDKGRCEACSGEGYETVEMQFLADVALLCAVCRGRRFKEEVLAV 757 Query: 779 KYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRV 838 +++G ++ +VL+MT++E + F AL R L + +GL Y+ LGQ +TLSGGEAQR+ Sbjct: 758 RHQGFSVAQVLEMTVDEVLQHFGGDTALKRTLGPVARLGLGYLPLGQPLSTLSGGEAQRL 817 Query: 839 KLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTA 898 KLAR L+ G TL+++DEP+ GLH D++ ++ L+ L D G +++V++H++ V+K + Sbjct: 818 KLARALANEAQG-TLFLIDEPSAGLHAEDVRHVITALNALVDFGASVLVVDHDVAVMKAS 876 Query: 899 DWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLK 937 DW++DLGP GG GG ++ GTPE VA + TA+ L+ Sbjct: 877 DWVIDLGPVGGRDGGRLVAEGTPEDVARGKG-ATAQALR 914 Score = 578 bits (1489), Expect = e-163, Method: Composition-based stats. Identities = 254/541 (46%), Positives = 353/541 (65%), Gaps = 8/541 (1%) Query: 402 SNRPCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILK 461 PC +C G+RL R V +E + S+ + K G RA + E + Sbjct: 1219 EVAPCRTCGGSRLAPVPRGVRLEGARYHEVVQQSVASTLTRVRGWKFKGDRALLGEPSRQ 1278 Query: 462 EIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQ 521 E+ R++FL VGL YL+L R+A TLSGGE QR+RL++Q+GAGL G MYVLDEP+IGLH Sbjct: 1279 ELLRRMEFLERVGLGYLSLDRNAATLSGGEMQRLRLSAQLGAGLTGAMYVLDEPTIGLHP 1338 Query: 522 RDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIM 581 RD RLL L L G+TV+VVEHD D IRAADH++D+GP G GG ++AEGP + ++ Sbjct: 1339 RDTHRLLDNLRALVATGSTVLVVEHDSDTIRAADHLLDLGPTGGRGGGHILAEGPPDVVL 1398 Query: 582 AVPESLTGQYMSGKRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGV 641 +S T + + + ++ P R ++ ++L GAR NNLK V L LPVG ++GV Sbjct: 1399 E-SDSPTARALK-ESQVRPPSGR--GEAKQWIELKGARANNLKRVDLRLPVGRLNVVSGV 1454 Query: 642 SGSGKSTLINDTLFPIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNP 701 SGSGKSTLI L+P + +L+ A+P P+ + G E +V+ +DQSPIGRTPRS P Sbjct: 1455 SGSGKSTLIRQVLYPALREKLD-RVTAKPGPFTSLHGAEAVKRVLSVDQSPIGRTPRSVP 1513 Query: 702 ATYTGVFTPVRELFAGVPESRARGYTPGRFSFNVR-GGRCEACQGDGVIKVEMHFLPDIY 760 AT+ G++ +R +FA PE++ +G+TP RFSFN GGRC AC G G I EM FLPD+ Sbjct: 1514 ATFLGIWDELRRVFAATPEAKIKGFTPTRFSFNSASGGRCTACDGQGAISHEMSFLPDVV 1573 Query: 761 VPCDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTY 820 PC+ C G R++ TLE++Y G TI +VL ++ +EA++ F A+P +A L+ L D+G+ Y Sbjct: 1574 TPCEACNGARFDAATLEVRYHGLTIGDVLRLSADEAKDVFKALPRVAAPLECLADLGVGY 1633 Query: 821 IRLGQSATTLSGGEAQRVKLAREL-SKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLR 879 ++LGQ + TLSGGEAQR+KLA EL + TLY+LDEPTTGLH D+++L+ + +L Sbjct: 1634 LQLGQGSNTLSGGEAQRLKLAAELTASARHEPTLYVLDEPTTGLHLGDVEKLITFMGRLV 1693 Query: 880 DQGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLKPM 939 D+G+T+VVIEH+ VI AD +V+LGP+GG GG I+ GTP VA+ + T R LK + Sbjct: 1694 DRGDTLVVIEHHPSVIGAADHVVELGPDGGEAGGHIVAEGTPREVAKQKTP-TGRVLKSL 1752 Query: 940 L 940 Sbjct: 1753 F 1753 Score = 304 bits (779), Expect = 9e-81, Method: Composition-based stats. Identities = 121/285 (42%), Positives = 170/285 (59%), Gaps = 14/285 (4%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 63 IEV AR HNL +++ IP K+ VVTG SGSGKSSL FD ++AEGQRR++E+LS YARQ Sbjct: 937 IEVEHAREHNLHDVSCRIPLGKMTVVTGPSGSGKSSLVFDVVFAEGQRRFLETLSPYARQ 996 Query: 64 FLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCPDH 123 FL M +PDV+ I L P++++EQ+++ STV T+TE+ YLRLLFA++GEP CPD Sbjct: 997 FLPSMPRPDVERISSLPPSVALEQRTSRAGATSTVATVTEVAHYLRLLFAKLGEPHCPDD 1056 Query: 124 DVPLAAQTVSQMVDNVLS-QPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARIDGE 182 D P+ + + + + + EG LLAP ++ RKG + A G RA +DG+ Sbjct: 1057 DSPITSLAPDVLFAQLTAMKGEGT---LLAPAVRSRKGTYLDIFAAAARAGISRAIVDGK 1113 Query: 183 VCDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRL-AESFETALELSGGTAVVADMDDPK 241 + DPP+L ++H I++V + + +L + FE AL G V D Sbjct: 1114 LASTDDPPRLAKTREHDIDLV-----MYEGKLSKLERDVFEKALGWGQGAVKV----DAG 1164 Query: 242 AEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQ 286 E L S CP CG ++ EL+PR FSFN G C +C+G G+Q Sbjct: 1165 KGETLLSTERTCPKCGTAVPELDPRWFSFNTKQGRCESCEGTGIQ 1209 Score = 235 bits (600), Expect = 6e-60, Method: Composition-based stats. Identities = 100/325 (30%), Positives = 156/325 (48%), Gaps = 24/325 (7%) Query: 406 CASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGD 465 CA C G R + E V + + + +M++ ++ F + Sbjct: 742 CAVCRGRRFKEEVLAVRHQGFSVAQVLEMTVDEVLQHFGG--------------DTALKR 787 Query: 466 RLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNE 525 L + +GL YL L + TLSGGEAQR++LA + G ++++DEPS GLH D Sbjct: 788 TLGPVARLGLGYLPLGQPLSTLSGGEAQRLKLARALANEAQGTLFLIDEPSAGLHAEDVR 847 Query: 526 RLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPE 585 ++ L L D G +V+VV+HD ++A+D VID+GP G GG +VAEG E + Sbjct: 848 HVITALNALVDFGASVLVVDHDVAVMKASDWVIDLGPVGGRDGGRLVAEGTPEDVARGKG 907 Query: 586 SLTGQYMSGKRK---IEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVS 642 + T Q + G+RK V ++ +++ AR +NL DV+ +P+G T +TG S Sbjct: 908 A-TAQALRGERKPLGRAVKLRKPGKGEVPAIEVEHAREHNLHDVSCRIPLGKMTVVTGPS 966 Query: 643 GSGKSTLINDTLFPIAQRQLNGATIAEPA------PYRDIQGLEHFDKVIDIDQSPIGRT 696 GSGKS+L+ D +F QR+ P D++ + + ++Q Sbjct: 967 GSGKSSLVFDVVFAEGQRRFLETLSPYARQFLPSMPRPDVERISSLPPSVALEQRTSRAG 1026 Query: 697 PRSNPATYTGVFTPVRELFAGVPES 721 S AT T V +R LFA + E Sbjct: 1027 ATSTVATVTEVAHYLRLLFAKLGEP 1051 Score = 184 bits (467), Expect = 1e-44, Method: Composition-based stats. Identities = 88/227 (38%), Positives = 122/227 (53%), Gaps = 16/227 (7%) Query: 726 YTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKYKGKTI 785 P FSFN + GRCE+C+G G+ PC C G R ++ +G Sbjct: 1186 LDPRWFSFNTKQGRCESCEGTGIQGGAEAMAEGEVAPCRTCGGSRLAPVPRGVRLEGARY 1245 Query: 786 HEVLDMTI--------------EEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLS 831 HEV+ ++ + A + L R+++ L VGL Y+ L ++A TLS Sbjct: 1246 HEVVQQSVASTLTRVRGWKFKGDRALLGEPSRQELLRRMEFLERVGLGYLSLDRNAATLS 1305 Query: 832 GGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHN 891 GGE QR++L+ +L TG +Y+LDEPT GLH D +LLD L L G+T++V+EH+ Sbjct: 1306 GGEMQRLRLSAQLGAGLTG-AMYVLDEPTIGLHPRDTHRLLDNLRALVATGSTVLVVEHD 1364 Query: 892 LDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLKP 938 D I+ AD ++DLGP GG GGG IL G P+ V E S TAR LK Sbjct: 1365 SDTIRAADHLLDLGPTGGRGGGHILAEGPPDVVLES-DSPTARALKE 1410 Score = 90.4 bits (223), Expect = 3e-16, Method: Composition-based stats. Identities = 42/120 (35%), Positives = 62/120 (51%), Gaps = 7/120 (5%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 63 IE++GAR +NLK ++L +P +L VV+G+SGSGKS+L LY R ++ ++A Sbjct: 1426 IELKGARANNLKRVDLRLPVGRLNVVSGVSGSGKSTLIRQVLYP-ALREKLDRVTAKPGP 1484 Query: 64 FLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCPDH 123 F SL V + +S++Q PRS T I D LR +FA E + Sbjct: 1485 FTSLHGAEAVKRV------LSVDQSPIGRTPRSVPATFLGIWDELRRVFAATPEAKIKGF 1538 >UniRef50_Q6MBT0 Putative excinuclease ABC chain A n=1 Tax=Candidatus Protochlamydia amoebophila UWE25 RepID=Q6MBT0_PARUW Length = 937 Score = 941 bits (2432), Expect = 0.0, Method: Composition-based stats. Identities = 359/941 (38%), Positives = 562/941 (59%), Gaps = 20/941 (2%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 63 I ++G + HNLKN+++ +P+ + V+TG+SGSGKSSLAFDTL+AEGQRRY+E LS AR Sbjct: 10 INLQGCKEHNLKNLSVQLPKHAITVITGVSGSGKSSLAFDTLFAEGQRRYLEYLSPQARP 69 Query: 64 FLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCPDH 123 ++ M KPDVD IEGLSP ++I Q TV T T+++D+L LL+A+VG+ P Sbjct: 70 WIKQMPKPDVDLIEGLSPTLAIGQHRQPLYFYGTVATYTDLYDFLSLLYAKVGDQYSPAT 129 Query: 124 DVPLAAQTVSQMVDNVLS-QPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARIDGE 182 L+ T +M+D +L G RL L+API ++ H + L G+IR RI+ + Sbjct: 130 GKKLSRFTRQEMIDWILKNYSAGSRLQLIAPIKLVKENGHQ-AITRLQQMGFIRMRINEQ 188 Query: 183 VCDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVADMDDPKA 242 +P + +EVVVDR ++R+ + RLA S ETAL+LS G + + + Sbjct: 189 EWCGENPFPINK-AISNLEVVVDRLEIREGIRDRLAPSVETALDLSQGILKIQE--GKEG 245 Query: 243 EELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPELSL 302 + + CP G+S LE F+FN+P GAC C+GLG ++ +P +VI + L Sbjct: 246 NTHYLTEIYVCPETGFSFAPLEAGDFNFNSPKGACAACNGLGGREQVNPSQVIFDENEPL 305 Query: 303 AG---GAIRGWDRRNFYYFQ-MLKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKENIEF 358 + ++ Y F+ +LK+L E +S + +L+G +E + Sbjct: 306 LDQIQVILDHLPKKAAYSFKSLLKALWKILNLSEENFIKDISQMILNKILFGHSQEIVFN 365 Query: 359 KYMNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGTRLRREA 418 +N+ ++ + ++G++ + + ++ EL+ FI + C+SC G RL+ E+ Sbjct: 366 VQINE--ESEQLKAKWKGLIPVLNEALEMKKNKGSLSELS-FIDWQTCSSCLGGRLKPES 422 Query: 419 RHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNVGLNYL 478 ++ + + +++ + G++ I ++IL I RL+FL VGL YL Sbjct: 423 LACLIQEKNIYQLCSLTVAECLIKIKAWLFTGKQEAIVKEILPHIQSRLEFLDQVGLGYL 482 Query: 479 TLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLG 538 TL+R +TLS GEA RI+LASQIGA L G++Y+LDEPS+GLH++D + L + L+ LG Sbjct: 483 TLTREGKTLSDGEAHRIQLASQIGAKLSGIIYILDEPSLGLHRQDIQHLHKVIHELKALG 542 Query: 539 NTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKI 598 NTV++VEH++ I+ AD+++++GPGAG GG++ +G + ++ SLTG+++SGK + Sbjct: 543 NTVVIVEHEKSLIQQADYILELGPGAGSLGGQICFQGTITDLLNDSNSLTGKWLSGKLSL 602 Query: 599 EVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIA 658 +P +R + L++ GA NNL D + +P+G F GVSGSGKSTL+ D + Sbjct: 603 PIPPRR--KIQQDWLEIRGATLNNLNDFSANIPLGCFVGFCGVSGSGKSTLVLDIIGQQL 660 Query: 659 QRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGV 718 + L I + + ++I ++ + RS PATY G+ TP+R+LFA Sbjct: 661 KNFLVRGIIPHF-----LNKYQTIKRLISHEKQTDRLSARSIPATYIGIMTPLRQLFAET 715 Query: 719 PESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEI 778 ++ARGYT RFS N RGGRCEAC+G G I+V MH +PD ++PCD C+G RYN ETL+I Sbjct: 716 RLAKARGYTASRFSLNKRGGRCEACEGLGYIEVNMHLMPDFFMPCDICQGLRYNYETLQI 775 Query: 779 KYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRV 838 ++ K I ++L ++ E+ + F +P+LA L+ + ++GL Y++LGQ TLSGGE QR+ Sbjct: 776 TWENKNIADILRLSALESFQLFKHIPSLAPTLELMTELGLDYLQLGQPFNTLSGGEIQRL 835 Query: 839 KLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTA 898 KL +L+ + +TLYILDEP++GLH DI++L+ +LHKL ++G+T+ VIEH+LD++ A Sbjct: 836 KLIADLAGKTQEKTLYILDEPSSGLHLQDIEKLVKILHKLVEKGHTVFVIEHHLDILYQA 895 Query: 899 DWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLKPM 939 DW+++LGPEGG GG ++ G P T + T + Sbjct: 896 DWLIELGPEGGPKGGRLIFEG-PSTKMIKAHTPTGKVFSQF 935 Score = 162 bits (409), Expect = 8e-38, Method: Composition-based stats. Identities = 74/214 (34%), Positives = 115/214 (53%), Gaps = 18/214 (8%) Query: 741 EACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEE----- 795 E + G + E+ F+ + C C G R E+L + K I+++ +T+ E Sbjct: 391 EMKKNKGSLS-ELSFID--WQTCSSCLGGRLKPESLACLIQEKNIYQLCSLTVAECLIKI 447 Query: 796 -AREFFDAVPALAR--------KLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSK 846 A F A+ + +L+ L VGL Y+ L + TLS GEA R++LA ++ Sbjct: 448 KAWLFTGKQEAIVKEILPHIQSRLEFLDQVGLGYLTLTREGKTLSDGEAHRIQLASQIGA 507 Query: 847 RGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADWIVDLGP 906 + +G +YILDEP+ GLH DIQ L V+H+L+ GNT+V++EH +I+ AD+I++LGP Sbjct: 508 KLSG-IIYILDEPSLGLHRQDIQHLHKVIHELKALGNTVVIVEHEKSLIQQADYILELGP 566 Query: 907 EGGSGGGEILVSGTPETVAECEASHTARFLKPML 940 GS GG+I GT + S T ++L L Sbjct: 567 GAGSLGGQICFQGTITDLLNDSNSLTGKWLSGKL 600 Score = 80.7 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 44/132 (33%), Positives = 64/132 (48%), Gaps = 14/132 (10%) Query: 611 KVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAEP 670 + + L G + +NLK++++ LP T ITGVSGSGKS+L DTLF QR+ + Sbjct: 8 RFINLQGCKEHNLKNLSVQLPKHAITVITGVSGSGKSSLAFDTLFAEGQRRYLEYLSPQA 67 Query: 671 APY------RDIQGLEHFDKVIDIDQSPIGRTP---RSNPATYTGVFTPVRELFAGVPE- 720 P+ D+ +E + I Q R P ATYT ++ + L+A V + Sbjct: 68 RPWIKQMPKPDVDLIEGLSPTLAIGQ---HRQPLYFYGTVATYTDLYDFLSLLYAKVGDQ 124 Query: 721 -SRARGYTPGRF 731 S A G RF Sbjct: 125 YSPATGKKLSRF 136 Score = 79.6 bits (195), Expect = 6e-13, Method: Composition-based stats. Identities = 37/120 (30%), Positives = 58/120 (48%), Gaps = 13/120 (10%) Query: 2 DKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYA 61 D +E+RGA +NL + + IP + G+SGSGKS+L D + + + V + Sbjct: 613 DWLEIRGATLNNLNDFSANIPLGCFVGFCGVSGSGKSTLVLDIIGQQLKNFLVRGIIP-- 670 Query: 62 RQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFA--RVGEPR 119 FL+ + I+ L IS E+++ + RS T I LR LFA R+ + R Sbjct: 671 -HFLNKYQT-----IKRL---ISHEKQTDRLSARSIPATYIGIMTPLRQLFAETRLAKAR 721 >UniRef50_Q0A6L0 Excinuclease ABC, A subunit n=4 Tax=Bacteria RepID=Q0A6L0_ALHEH Length = 2175 Score = 929 bits (2401), Expect = 0.0, Method: Composition-based stats. Identities = 407/1019 (39%), Positives = 569/1019 (55%), Gaps = 89/1019 (8%) Query: 2 DKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYA 61 I++ AR HNLK +++ IPR++L V+TGLSGSGKS++AFD L+ EGQRRY+ESL+AYA Sbjct: 1163 HYIDIHHAREHNLKGVDIRIPRNRLTVITGLSGSGKSTVAFDILFNEGQRRYLESLNAYA 1222 Query: 62 RQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCP 121 RQF+ +PDVD +EG+ P ++IEQ+++ +STV T+TE+H +LRLL+AR+G CP Sbjct: 1223 RQFVQPAARPDVDSVEGIPPTVAIEQRTSRGGRKSTVATLTELHHFLRLLYARLGTWHCP 1282 Query: 122 DHDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARIDG 181 VP+ AQT + +L + G+ L LLAP++ RKG + + A +G +DG Sbjct: 1283 ACQVPIQAQTPEAIHAQLLREHRGETLHLLAPMVSGRKGIYKELARWAAGKGVGHLYVDG 1342 Query: 182 EVCDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVADMDDPK 241 E +D PKL+ ++H I++ V ++ + Q L ++ ALE G + + Sbjct: 1343 EFLPTADWPKLDRYREHDIDLPVAELRIEPENAQPLRQAIARALEQGKGVLRILTAERT- 1401 Query: 242 AEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQY------------- 288 S ACP C S E +PR FS+N+P G CPTC G G Sbjct: 1402 --LQTLSTERACPSCQRSFDEPDPRQFSYNSPHGWCPTCYGTGEVLEGFSDEDSGEERHW 1459 Query: 289 ----FDPDRV-----------------------IQNPELS-LAGGAIRGWDRRNFYYFQM 320 D D + PELS L R W F + Sbjct: 1460 RETESDDDALPAPCPTCNGTRLNAEARAVTFQGRTLPELSALTVREARAW----FRVMRA 1515 Query: 321 LKSLADHYKFDVEAPWGSLSANVHKV-VLYGSGKENIEFKYMNDRGDTSIRRHPFE---- 375 + +V+ P + V G+ RG+ R P + Sbjct: 1516 HSPQPGPKEIEVDDPEAAERGGGRSTPVPSGARPAGGSGPKGGRRGEAETDRCPVDTDPA 1575 Query: 376 -----GVLHNMERRYKET--ESSAVREELAKFISNRPCASCEGTRLRREARHV-YVENTP 427 G L +++ E +A + +S P + E R AR + + P Sbjct: 1576 ERAGHGWLAPALPAAQDSAAEQAATDRQARDGLSVGPASGTE-KRSSAPARSAPHPASNP 1634 Query: 428 LPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTLSRSAETL 487 + + G + L L + A IA +L EI RL+FL +VGL YL+L R+A TL Sbjct: 1635 VEVAPPNAHGPGNDNAEPLALTDREATIARDVLPEIHHRLRFLEDVGLGYLSLDRAAPTL 1694 Query: 488 SGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHD 547 SGGEAQRIRLA+Q+G+ L GV YV+DEP+IGLH RDN LL L L GNT++VVEHD Sbjct: 1695 SGGEAQRIRLAAQLGSNLQGVCYVMDEPTIGLHPRDNRLLLDVLARLEGKGNTIVVVEHD 1754 Query: 548 EDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEVPKKRV-- 605 ED IR A+H+ID+GPGAG++GG VVA G +E ++ P S+TG+Y+ + +R Sbjct: 1755 EDTIRRAEHIIDLGPGAGINGGRVVAAGTVEQLLQHPRSITGRYLRHPLHHPLRGQRRTV 1814 Query: 606 ------------PANPEK--VLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLIN 651 P P + VL L +NL+ L LP+G +TGVSGSGKS+LI Sbjct: 1815 SLATTPAGSHPQPTTPAEHDVLTLHAPTLHNLQGHDLHLPLGRLMVVTGVSGSGKSSLIR 1874 Query: 652 DTLFPIAQRQLNGATIAEPAP---YRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVF 708 L P +R L+ P + G + D+V+++DQ+PIG+TPRS PATY G + Sbjct: 1875 GVLKPALKRLLSRKRDQATPPLPHCAGLDGWQAVDRVLEVDQTPIGKTPRSCPATYIGFW 1934 Query: 709 TPVRELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKG 768 +R+L+AG E+ RGY PGRFSFN + GRC C G GV ++EM+FLPD+ VPC+ C G Sbjct: 1935 DDIRKLYAGTQEASLRGYGPGRFSFNTKDGRCPDCDGQGVRRIEMNFLPDVTVPCETCHG 1994 Query: 769 KRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSAT 828 R+ RETL +++KG+ I +VL+M++EEA FF A P + L L VGL Y+ LGQ++ Sbjct: 1995 LRFTRETLAVEWKGRHIGDVLNMSVEEATAFFAAQPRIHHPLTLLEAVGLGYLTLGQASP 2054 Query: 829 TLSGGEAQRVKLARELSK-------RGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQ 881 TLSGGEAQR+KL EL+K + T TLY+LDEPT GLH AD+++L+D L +L D Sbjct: 2055 TLSGGEAQRIKLVTELAKARPDLRAQRTPHTLYVLDEPTVGLHMADVERLIDALQRLVDA 2114 Query: 882 GNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLKPML 940 G+T+VVIEHNLD+I ADW+VD+GPEGG GG ++ +G PE VA ++ T RFL +L Sbjct: 2115 GHTVVVIEHNLDLIAEADWVVDIGPEGGDAGGRVVAAGPPEAVAA-GSTATGRFLAEVL 2172 Score = 629 bits (1623), Expect = e-178, Method: Composition-based stats. Identities = 231/641 (36%), Positives = 327/641 (51%), Gaps = 65/641 (10%) Query: 2 DKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYA 61 D I VRGAR +NL+ +L IP +L+V+TG+SGSGKSSLAFDT+YAEGQRRYVE+ S YA Sbjct: 4 DCIRVRGARQNNLRGFDLDIPLGELVVITGVSGSGKSSLAFDTVYAEGQRRYVETFSPYA 63 Query: 62 RQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCP 121 RQFL M++P VD I+G+ PAI+I+Q + RSTVGT+TE++D+L+LLFAR + C Sbjct: 64 RQFLDRMDRPAVDRIDGVLPAIAIDQTNPVRTSRSTVGTMTELNDHLKLLFARTAQLYCG 123 Query: 122 DHDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARIDG 181 + T + +L+ G+R M+ A + +K E LA QGY R I G Sbjct: 124 GCGKRVQRDTAEGVAARLLAGHAGERAMVTARVAIPKKSSADTLRELLAGQGYTR--IHG 181 Query: 182 EVCDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVADMDD-- 239 E + H +EVV DR ++ D RL E+ E+ L+L G V +D+ Sbjct: 182 E------------DRTH-LEVVTDRIRLVPDRRDRLVEALESGLKLGRGHIQVRLLDENR 228 Query: 240 PKAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPE 299 + L +SA+ C C + P LFSFN+P GAC TC G G D VI + Sbjct: 229 EPGKPLRYSADLHCADCDIHYDDPTPGLFSFNSPVGACETCRGFGRVMGIDYRLVIPDDA 288 Query: 300 LSLAGGAIRGWDRRNFYYFQ-MLKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKENIEF 358 LSL GAI+ + Q L A + P+ L + ++ G GK Sbjct: 289 LSLEAGAIKPFQSGRSAECQDDLLFHARRRGVATDIPFRDLPEADRQWIIQGEGK----- 343 Query: 359 KYMNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGTRLRREA 418 + GV + +++ VR L+++ S PC C G RL+ A Sbjct: 344 ----------FNGRKWYGVDGYFQYLERKSYKMHVRVLLSRYRSYDPCPDCHGARLKPGA 393 Query: 419 RHVYVE-------------------------------NTPLPAISDMSIGHAMEFFNNLK 447 + L + + + FF ++ Sbjct: 394 LLWRIGNHEDSDAVIDRAERHRPHGATLPEHALHGLPGLHLHDVLTLPLDRCARFFQDIH 453 Query: 448 LAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVG 507 L + AE +L+ I +RL +L VGL YLTL R + TLSGGE QRI L + +G LV Sbjct: 454 LPAPLDEAAEILLEGIRNRLTYLNTVGLGYLTLDRQSRTLSGGEVQRINLTTALGTALVN 513 Query: 508 VMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVH 567 ++VLDEPSIGLH RD +R++ + LRD GN+++VVEHD ++AAD +IDIGPG G Sbjct: 514 TLFVLDEPSIGLHPRDIDRIVTVMHRLRDAGNSLLVVEHDPAVMQAADRLIDIGPGPGER 573 Query: 568 GGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEVPKKRVPAN 608 GG++ G ++ SLT Y++G+R++ VP P Sbjct: 574 GGQITFNGTPAELLRTENSLTADYLTGRRQV-VPTNARPDR 613 Score = 396 bits (1019), Expect = e-108, Method: Composition-based stats. Identities = 170/407 (41%), Positives = 232/407 (57%), Gaps = 29/407 (7%) Query: 561 GPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEVPKKR-------VPANPE-KV 612 G G +G PE + + R+ + P P+ Sbjct: 725 GGRRDAATGRQAMDGLSAGPARSPEKRSSEPTRHHRQAPDSEPNNGSSQAVTPLPPDTPK 784 Query: 613 LKLTGARGNNLKDVTLTLPVG-LFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAEPA 671 + + GA +NL+ +T+ +PV C+TGVSGSGKSTL+ D L R+ G P Sbjct: 785 VTIQGATEHNLQHLTVEIPVHPALVCLTGVSGSGKSTLMRDILHNELARR-KGHPGDPPG 843 Query: 672 PYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESRARGYTPGRF 731 ++ + G EH D V+ +DQSPIG+T RSNPA+YTG F P+R+ +A P +R R YTPG F Sbjct: 844 AFQTLTGDEHIDNVVLVDQSPIGKTTRSNPASYTGAFEPIRKAYAAEPLARERQYTPGVF 903 Query: 732 SFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKY----------- 780 SFN GRC C G+G VEM FL D+Y+ C C G RY E LEI+ Sbjct: 904 SFNSGKGRCPTCGGNGFEHVEMQFLSDVYLRCPDCNGSRYRPEILEIQRLPDPGADLGTA 963 Query: 781 --KGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRV 838 + I E+LD+T+++A EFF PA+ R L+ L VGL Y++LGQ TLSGGEAQR+ Sbjct: 964 GDGPRHIAEILDLTVDQATEFFRTTPAVLRSLEPLQAVGLGYLKLGQPVPTLSGGEAQRL 1023 Query: 839 KLARELSKRGTGQT-----LYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLD 893 KLA L+K + L++ DEPTTGLHF D+ LL +L+D+G+ ++VIEHNLD Sbjct: 1024 KLAGHLAKTSGRRKQQQRLLFLFDEPTTGLHFHDVAVLLSAFRRLQDEGHALLVIEHNLD 1083 Query: 894 VIKTADWIVDLGPEGGSGGGEILVSGTPETVA-ECEASHTARFLKPM 939 V++ ADWI+DLGPEGG GG ++ +GTPE + + + SHT R L Sbjct: 1084 VMRAADWIIDLGPEGGDRGGRLVCTGTPEQIMAQSDLSHTGRALAEY 1130 Score = 229 bits (584), Expect = 4e-58, Method: Composition-based stats. Identities = 135/492 (27%), Positives = 195/492 (39%), Gaps = 99/492 (20%) Query: 403 NRPCASCEGTRLRREARHVYV-------------ENTPLPAISDMSIGHAMEFFNNLKLA 449 C C G+R R E + + I D+++ A EFF Sbjct: 932 YLRCPDCNGSRYRPEILEIQRLPDPGADLGTAGDGPRHIAEILDLTVDQATEFFRT---- 987 Query: 450 GQRAKIAEKILKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGA------ 503 + L+ L VGL YL L + TLSGGEAQR++LA + Sbjct: 988 ----------TPAVLRSLEPLQAVGLGYLKLGQPVPTLSGGEAQRLKLAGHLAKTSGRRK 1037 Query: 504 GLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPG 563 ++++ DEP+ GLH D LL L+D G+ ++V+EH+ D +RAAD +ID+GP Sbjct: 1038 QQQRLLFLFDEPTTGLHFHDVAVLLSAFRRLQDEGHALLVIEHNLDVMRAADWIIDLGPE 1097 Query: 564 AGVHGGEVVAEGPLEAIMAVPE-SLTGQYMSG--------KRKIEVPKKRVPANPEK--- 611 G GG +V G E IMA + S TG+ ++ + E + P Sbjct: 1098 GGDRGGRLVCTGTPEQIMAQSDLSHTGRALAEYTGALERLRTTAEASEGAASGEPGPGMS 1157 Query: 612 ------VLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQL--- 662 + + AR +NLK V + +P T ITG+SGSGKST+ D LF QR+ Sbjct: 1158 GRGTQHYIDIHHAREHNLKGVDIRIPRNRLTVITGLSGSGKSTVAFDILFNEGQRRYLES 1217 Query: 663 ---NGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELF---- 715 +PA D+ +E + I+Q +S AT T + +R L+ Sbjct: 1218 LNAYARQFVQPAARPDVDSVEGIPPTVAIEQRTSRGGRKSTVATLTELHHFLRLLYARLG 1277 Query: 716 ------------AGVPES-------RARGYTPGRFSFNVRG--------GRCEACQGDGV 748 A PE+ RG T + V G R A +G G Sbjct: 1278 TWHCPACQVPIQAQTPEAIHAQLLREHRGETLHLLAPMVSGRKGIYKELARWAAGKGVGH 1337 Query: 749 IKVEMHFLPDIYVPCDQCKGKRYNRETLEIKYKGKTI----HEVLDMTIEEAREFFDAVP 804 + V+ FLP D K RY +++ I + L I A E V Sbjct: 1338 LYVDGEFLP----TADWPKLDRYREHDIDLPVAELRIEPENAQPLRQAIARALEQGKGVL 1393 Query: 805 AL---ARKLQTL 813 + R LQTL Sbjct: 1394 RILTAERTLQTL 1405 Score = 159 bits (402), Expect = 6e-37, Method: Composition-based stats. Identities = 69/222 (31%), Positives = 104/222 (46%), Gaps = 46/222 (20%) Query: 760 YVPCDQCKGKRYNRETLEIK-------------------------------YKGKTIHEV 788 Y PC C G R L + G +H+V Sbjct: 378 YDPCPDCHGARLKPGALLWRIGNHEDSDAVIDRAERHRPHGATLPEHALHGLPGLHLHDV 437 Query: 789 LDMTIEEAREFFDAVP--------------ALARKLQTLMDVGLTYIRLGQSATTLSGGE 834 L + ++ FF + + +L L VGL Y+ L + + TLSGGE Sbjct: 438 LTLPLDRCARFFQDIHLPAPLDEAAEILLEGIRNRLTYLNTVGLGYLTLDRQSRTLSGGE 497 Query: 835 AQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDV 894 QR+ L L TL++LDEP+ GLH DI +++ V+H+LRD GN+++V+EH+ V Sbjct: 498 VQRINLTTALGTALVN-TLFVLDEPSIGLHPRDIDRIVTVMHRLRDAGNSLLVVEHDPAV 556 Query: 895 IKTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFL 936 ++ AD ++D+GP G GG+I +GTP + E S TA +L Sbjct: 557 MQAADRLIDIGPGPGERGGQITFNGTPAELLRTENSLTADYL 598 Score = 98.9 bits (245), Expect = 8e-19, Method: Composition-based stats. Identities = 39/118 (33%), Positives = 57/118 (48%), Gaps = 6/118 (5%) Query: 609 PEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIA 668 +++ GAR NNL+ L +P+G ITGVSGSGKS+L DT++ QR+ Sbjct: 2 SRDCIRVRGARQNNLRGFDLDIPLGELVVITGVSGSGKSSLAFDTVYAEGQRRYVETFSP 61 Query: 669 EPAPYRDIQGLEHFDKV------IDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPE 720 + D D++ I IDQ+ RT RS T T + ++ LFA + Sbjct: 62 YARQFLDRMDRPAVDRIDGVLPAIAIDQTNPVRTSRSTVGTMTELNDHLKLLFARTAQ 119 Score = 82.3 bits (202), Expect = 9e-14, Method: Composition-based stats. Identities = 36/141 (25%), Positives = 60/141 (42%), Gaps = 27/141 (19%) Query: 3 KIEVRGARTHNLKNINLVIPRD-KLIVVTGLSGSGKSSLAFDTLYAE-GQRRYVESLSAY 60 K+ ++GA HNL+++ + IP L+ +TG+SGSGKS+L D L+ E +R+ Sbjct: 784 KVTIQGATEHNLQHLTVEIPVHPALVCLTGVSGSGKSTLMRDILHNELARRKGHPGDPPG 843 Query: 61 ARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFA------- 113 A Q L+ E + + ++Q RS + T + +R +A Sbjct: 844 AFQTLTGD--------EHIDNVVLVDQSPIGKTTRSNPASYTGAFEPIRKAYAAEPLARE 895 Query: 114 ----------RVGEPRCPDHD 124 G+ RCP Sbjct: 896 RQYTPGVFSFNSGKGRCPTCG 916 >UniRef50_D0LX97 Excinuclease ABC, A subunit n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LX97_HALO1 Length = 1847 Score = 911 bits (2354), Expect = 0.0, Method: Composition-based stats. Identities = 362/970 (37%), Positives = 503/970 (51%), Gaps = 58/970 (5%) Query: 1 MDKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAY 60 M IE+RGAR +NL +++L + L+ VTG SG+GKSSLAF TLYAEGQRRYVES SAY Sbjct: 1 MRPIELRGARQNNLCSVDLTLEPGTLVAVTGPSGAGKSSLAFGTLYAEGQRRYVESFSAY 60 Query: 61 ARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRC 120 ARQFL + +P+VD ++ + A+++++ + RSTVGT+TE+ DY + L+A C Sbjct: 61 ARQFLERLARPEVDALDPVPAAVAVDRSAPVRTSRSTVGTMTELCDYAKSLWAHSARLCC 120 Query: 121 PDHDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARID 180 P + ++V+ G R+ + + + L +QGY R Sbjct: 121 PGCGAEVQPDEPGAAAESVIEAHSGARVAVSFAVRASSADALALARDELRAQGYGRVLAG 180 Query: 181 GEVCDLSDPPKL----------ELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGG 230 G + L + + V+ DR +RL+ES A+ GG Sbjct: 181 GALAKLDELDDDALAAAAAEDNAHHGGGALAVIADRSTATARNRRRLSESLAAAMHRGGG 240 Query: 231 TAVVADMDDPKA--EELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQY 288 A V D L FS C C R P LFSFN+P GACP+C G G Sbjct: 241 RARVHVFDAEGGLGVTLRFSDRLHCADCERDFRPATPGLFSFNSPIGACPSCRGFGRVIG 300 Query: 289 FDPDRVIQNPELSLAGGAIRGWDRRNF-YYFQMLKSLADHYKFDVEAPWGSLSANVHKVV 347 D +V+ +P LSL+ GAIR W + + + + L A AP LSA + Sbjct: 301 IDVRKVLPDPSLSLSAGAIRPWRGKKYAWERRELARHAKRAGIPWSAPVSELSAEQLAWL 360 Query: 348 LYGSGKENIEFKYMNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCA 407 + G + RG +T VR LA++ + C Sbjct: 361 VEGEPGGYEGGGWWGLRGW--------------FSWLESKTYKLHVRVLLARYRAYDECP 406 Query: 408 SCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAG----------------- 450 +C G RLR EA V + +S+ A +F + Sbjct: 407 ACAGARLRPEALWWRVRGLDMAGFLALSVADARQFLLDFDRDDDGDGHGDGAAAGSARAR 466 Query: 451 -------QRAKIAEKILKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGA 503 +R A + E RL L +VGL YLTL R++ TLSGGE QR+ L +GA Sbjct: 467 GARGDGRERDDAAALLRAECLRRLSTLADVGLAYLTLDRASRTLSGGETQRVALTGALGA 526 Query: 504 GLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPG 563 L G + V+DEPS+GLH D RL + L NTV+VVEHD I+ AD V+++GPG Sbjct: 527 SLAGALIVMDEPSVGLHPHDVGRLAEVVQRLAAADNTVLVVEHDWALIQRADRVVELGPG 586 Query: 564 AGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEVPKKRVPANPEKVLKLTGARGNNL 623 AG GG VV +G E +++ ++ TG+ G R + ++ P ++L A G+NL Sbjct: 587 AGREGGRVVFDGAPEELLS-SDTATGRAHRGARAAALVRR----EPSAWIELRAATGHNL 641 Query: 624 KDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAEPAPYRDIQGLEHFD 683 + V + +P GL TC+TGVSGSGKS+LI TL P L G P+ + G + Sbjct: 642 RGVDVAIPRGLLTCVTGVSGSGKSSLILGTLAPAVIAALGGEVEEPALPHAALAGADALA 701 Query: 684 KVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESRARGYTPGRFSFNVRGGRCEAC 743 + +DQSP+GRT R NPATY + +R A + ARG + G FSFNV GGRCE+C Sbjct: 702 DAVVVDQSPLGRTARGNPATYVKAWDWIRGALAKTEMAAARGLSAGAFSFNVPGGRCESC 761 Query: 744 QGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAV 803 +G+G VEM FL D+ C C GKR+ LE++Y+GK + ++L+M+++EA F + Sbjct: 762 KGEGAETVEMQFLADVSFSCPDCGGKRFVGPVLEVRYQGKNVVDILEMSVDEALACFSSR 821 Query: 804 PALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGL 863 L R+LQ ++DVGL Y+RLGQ TLSGGEAQR+KLA L++ G L ILDEPT GL Sbjct: 822 T-LTRRLQPVVDVGLGYLRLGQPLNTLSGGEAQRLKLAEALARTKAG-GLVILDEPTAGL 879 Query: 864 HFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPET 923 H D+ L L L +G+T+VV+EH++ + ADWIVDLGP G+ GG I+ SGTPE Sbjct: 880 HAQDVVPLRRSLEALVARGDTVVVVEHDMALAAHADWIVDLGPGAGAHGGTIVASGTPEQ 939 Query: 924 VAECEASHTA 933 VA + S TA Sbjct: 940 VAAAQGSSTA 949 Score = 581 bits (1499), Expect = e-164, Method: Composition-based stats. Identities = 266/568 (46%), Positives = 356/568 (62%), Gaps = 12/568 (2%) Query: 376 GVLHNMERRYKETESSAVREELAKFISNRPCASCEGTRLRREARHVYVENTPLPAISDMS 435 GV+ RR + ++A + C C GTRL AR V V + + S Sbjct: 1280 GVIEPATRRKRGKRAAAEAP-------PKTCPDCAGTRLSPLARAVTVAGWSIAELFGRS 1332 Query: 436 IGHAMEFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRI 495 + A +++L G+ A IA L E RL FL +VG+ YL L R A TLSGGE QR+ Sbjct: 1333 VLEAGRALADMQLDGRDATIAAVPLAEARARLSFLASVGVGYLELDRPAATLSGGETQRV 1392 Query: 496 RLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAAD 555 RLA+Q+G+GL G++YVLDEP+IGLH RD LL + L + GN+++VVEHD D IRAAD Sbjct: 1393 RLAAQLGSGLTGILYVLDEPTIGLHPRDTGVLLDAMRALVERGNSLVVVEHDPDTIRAAD 1452 Query: 556 HVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEVPKKRVPANPEKVLKL 615 ++DIGPG G HGG ++A G ++A + T + +R VP +R + L+L Sbjct: 1453 FLVDIGPGGGHHGGRLLACGAAAEVLAEDRAPTAAAL--RRPPPVPAQRRVPDDAAQLEL 1510 Query: 616 TGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAEPA---P 672 GAR +NL+D+ L LP+G +TGVSGSGKSTLI + L L P Sbjct: 1511 RGARRHNLRDLDLRLPLGCLVAVTGVSGSGKSTLIREVLLEAVGDALARPARTPPRSQRA 1570 Query: 673 YRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESRARGYTPGRFS 732 YR+++G E + ++IDQSPIGRT RS PATY GV+ +R L A PE+RARGY RFS Sbjct: 1571 YRELRGAEALRRAVEIDQSPIGRTSRSVPATYVGVWNHIRALLANTPEARARGYGAARFS 1630 Query: 733 FNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKYKGKTIHEVLDMT 792 FN GRC C+G G +K EM FLPD+ + C+ C G R++ +TL+I ++G+ E+L + Sbjct: 1631 FNTAEGRCPTCEGQGRLKAEMAFLPDVEMDCEACAGMRFDPDTLDITWRGRNAGEILALE 1690 Query: 793 IEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQT 852 I EA E F +V +AR L L ++GL Y++LGQ ++TLSGGEAQR+KL EL R G T Sbjct: 1691 IGEAAEVFASVSKVARPLALLDELGLGYLKLGQPSSTLSGGEAQRLKLVSELGARSPGGT 1750 Query: 853 LYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADWIVDLGPEGGSGG 912 LY++DEPTTGLH D+ +LL +L +L ++G+T+VVIEH+ DV+ ADWIVDLGPEGG+ G Sbjct: 1751 LYVMDEPTTGLHRDDVVRLLALLDRLVERGDTVVVIEHHTDVMLAADWIVDLGPEGGAEG 1810 Query: 913 GEILVSGTPETVAECEASHTARFLKPML 940 G +LVSG PE VA C SHT L L Sbjct: 1811 GRVLVSGPPEDVAACAESHTGAVLAAEL 1838 Score = 293 bits (750), Expect = 2e-77, Method: Composition-based stats. Identities = 119/292 (40%), Positives = 173/292 (59%), Gaps = 15/292 (5%) Query: 3 KIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYAR 62 IE+ GAR HNL++++L +PR++L+VVTG SGSGKS+LAFD LYAEGQRRY+E+LS YAR Sbjct: 998 DIEILGAREHNLRDLSLRLPREQLVVVTGPSGSGKSTLAFDVLYAEGQRRYLETLSPYAR 1057 Query: 63 QFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCPD 122 Q++ + +P VD + G+ P++++EQ+ STV TITE+ YLR+++AR G CPD Sbjct: 1058 QYMPQLPRPAVDRVLGVPPSVALEQRVHRGGAGSTVATITEVAHYLRVMYARAGLLHCPD 1117 Query: 123 HDVPLAAQTVSQMVD--------NVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGY 174 +V +A + + + +G +++AP+++ RKG H + L G Sbjct: 1118 CEVAIAPRAPELLARDLAALARPDGDGDGDGDAWLVMAPVVRGRKGLHRELLARAREDGI 1177 Query: 175 IRARIDGEVCDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVV 234 RARIDG L KL+ ++H +E+V+ D + + A LSGG+ V Sbjct: 1178 ERARIDGAFTALRAGMKLDRYREHDVELVIAELPAEDAA---MPAALGRAAALSGGSVRV 1234 Query: 235 ADMDDPKAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQ 286 +ELL S ACP CG EL+PR+FSF+ GACP C+G GV Sbjct: 1235 RR----GQQELLLSTQRACPSCGTGFPELDPRMFSFHTRQGACPACEGRGVI 1282 Score = 232 bits (591), Expect = 7e-59, Method: Composition-based stats. Identities = 105/345 (30%), Positives = 153/345 (44%), Gaps = 47/345 (13%) Query: 406 CASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGD 465 C C G R V + + I +MS+ A+ F++ L Sbjct: 781 CPDCGGKRFVGPVLEVRYQGKNVVDILEMSVDEALACFSSRTLT---------------R 825 Query: 466 RLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNE 525 RL+ +V+VGL YL L + TLSGGEAQR++LA + G + +LDEP+ GLH +D Sbjct: 826 RLQPVVDVGLGYLRLGQPLNTLSGGEAQRLKLAEALARTKAGGLVILDEPTAGLHAQDVV 885 Query: 526 RLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPE 585 L +L L G+TV+VVEHD AD ++D+GPGAG HGG +VA G E + A Sbjct: 886 PLRRSLEALVARGDTVVVVEHDMALAAHADWIVDLGPGAGAHGGTIVASGTPEQVAAAQG 945 Query: 586 SLTGQYMSGKRKIEVPKKRVPANPEKV--------------------------LKLTGAR 619 S T +++ R ++P +++ GAR Sbjct: 946 SSTAPHLAAALAAHSSSTRTKSSPAGRASASVGASRAAQPGPVWQRAPIAGADIEILGAR 1005 Query: 620 GNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAEPAPYRDIQGL 679 +NL+D++L LP +TG SGSGKSTL D L+ QR+ Y Sbjct: 1006 EHNLRDLSLRLPREQLVVVTGPSGSGKSTLAFDVLYAEGQRRYLETLSPYARQYMPQLPR 1065 Query: 680 EHFDKVIDI------DQSPIGRTPRSNPATYTGVFTPVRELFAGV 718 D+V+ + +Q S AT T V +R ++A Sbjct: 1066 PAVDRVLGVPPSVALEQRVHRGGAGSTVATITEVAHYLRVMYARA 1110 Score = 166 bits (421), Expect = 3e-39, Method: Composition-based stats. Identities = 83/233 (35%), Positives = 116/233 (49%), Gaps = 22/233 (9%) Query: 726 YTPGRFSFNVRGGRCEACQGDGVIK----VEMHFLPDIYVP---CDQCKGKRYNRETLEI 778 P FSF+ R G C AC+G GVI+ + P C C G R + + Sbjct: 1259 LDPRMFSFHTRQGACPACEGRGVIEPATRRKRGKRAAAEAPPKTCPDCAGTRLSPLARAV 1318 Query: 779 KYKGKTIHEVLDMTIEEAREFFDAV--------------PALARKLQTLMDVGLTYIRLG 824 G +I E+ ++ EA + +L L VG+ Y+ L Sbjct: 1319 TVAGWSIAELFGRSVLEAGRALADMQLDGRDATIAAVPLAEARARLSFLASVGVGYLELD 1378 Query: 825 QSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNT 884 + A TLSGGE QRV+LA +L TG LY+LDEPT GLH D LLD + L ++GN+ Sbjct: 1379 RPAATLSGGETQRVRLAAQLGSGLTG-ILYVLDEPTIGLHPRDTGVLLDAMRALVERGNS 1437 Query: 885 IVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLK 937 +VV+EH+ D I+ AD++VD+GP GG GG +L G V + + TA L+ Sbjct: 1438 LVVVEHDPDTIRAADFLVDIGPGGGHHGGRLLACGAAAEVLAEDRAPTAAALR 1490 Score = 165 bits (418), Expect = 8e-39, Method: Composition-based stats. Identities = 81/273 (29%), Positives = 124/273 (45%), Gaps = 42/273 (15%) Query: 353 KENIEFKYMNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREE-LAKF---ISNRPCAS 408 + +E + + GV +++ T + R A+F + C + Sbjct: 1581 RRAVEIDQSPIGRTSRSVPATYVGVWNHIRALLANTPEARARGYGAARFSFNTAEGRCPT 1640 Query: 409 CEGT-RLR----------------------REARHVYVENTPLPAISDMSIGHAMEFFNN 445 CEG RL+ + + I + IG A E F + Sbjct: 1641 CEGQGRLKAEMAFLPDVEMDCEACAGMRFDPDTLDITWRGRNAGEILALEIGEAAEVFAS 1700 Query: 446 LKLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGA-G 504 + K+A L L +GL YL L + + TLSGGEAQR++L S++GA Sbjct: 1701 VS------KVARP--------LALLDELGLGYLKLGQPSSTLSGGEAQRLKLVSELGARS 1746 Query: 505 LVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGA 564 G +YV+DEP+ GLH+ D RLL L L + G+TV+V+EH D + AAD ++D+GP Sbjct: 1747 PGGTLYVMDEPTTGLHRDDVVRLLALLDRLVERGDTVVVIEHHTDVMLAADWIVDLGPEG 1806 Query: 565 GVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRK 597 G GG V+ GP E + A ES TG ++ + + Sbjct: 1807 GAEGGRVLVSGPPEDVAACAESHTGAVLAAELQ 1839 Score = 68.8 bits (167), Expect = 9e-10, Method: Composition-based stats. Identities = 38/124 (30%), Positives = 64/124 (51%), Gaps = 7/124 (5%) Query: 3 KIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYAR 62 ++E+RGAR HNL++++L +P L+ VTG+SGSGKS+L + L ++L+ AR Sbjct: 1507 QLELRGARRHNLRDLDLRLPLGCLVAVTGVSGSGKSTLIREVLLEAVG----DALARPAR 1562 Query: 63 QFLSLMEKP--DVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRC 120 ++ ++ E L A+ I+Q RS T + +++R L A E R Sbjct: 1563 TP-PRSQRAYRELRGAEALRRAVEIDQSPIGRTSRSVPATYVGVWNHIRALLANTPEARA 1621 Query: 121 PDHD 124 + Sbjct: 1622 RGYG 1625 >UniRef50_C4ZKV2 Excinuclease ABC, A subunit n=1 Tax=Thauera sp. MZ1T RepID=C4ZKV2_THASP Length = 2017 Score = 908 bits (2348), Expect = 0.0, Method: Composition-based stats. Identities = 386/968 (39%), Positives = 535/968 (55%), Gaps = 125/968 (12%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 63 IE+R AR HNLKN++L IPRD+ V+TGLSGSGKS+LAFD ++ EGQRRY+ESL+AYARQ Sbjct: 1138 IEIRHAREHNLKNVSLQIPRDQFTVITGLSGSGKSTLAFDIVFGEGQRRYLESLNAYARQ 1197 Query: 64 FLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCPDH 123 F+ +PDVD + G+ P ++IEQ+++ +STV T+TEIH +LRL++ ++G CPD Sbjct: 1198 FVQPASRPDVDGLFGIPPTVAIEQRTSRGGRKSTVATLTEIHPFLRLMYVKLGTQFCPDC 1257 Query: 124 DVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARIDGEV 183 +VP+ Q+ +V + + G + +LAP++ RKG +T + +G+ + R+DGE Sbjct: 1258 NVPVTPQSFEAIVAQLQRELRGASVEVLAPLVVNRKGLYTDLAKWARGKGHAQLRVDGEY 1317 Query: 184 CDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVADMDDPKAE 243 + P+L+ K+H IE+ V+ + L E ALE+ G V ++ A Sbjct: 1318 LPTAKWPRLDRYKEHNIELPTGMVVVQPESEATLREFVRQALEIGKGVIKVLEIGKLGAV 1377 Query: 244 ELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPELSLA 303 + FS ACP+C G G P+ +P L + Sbjct: 1378 PITFSTLR------------------------ACPSC-GTGF-----PE---PDPRL-FS 1403 Query: 304 GGAIRGWDRRNFYYFQMLKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKENIEFKYMND 363 A GW + Y LK+ A + G +E I Sbjct: 1404 YNAKHGWCPKC--YGTGLKTAARI--------------EDPDALDLGDAEEVI------- 1440 Query: 364 RGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGTRLRREARHVYV 423 +S+ PC +C+G RL AR V Sbjct: 1441 -------------------------------------VSDEPCPACDGARLNPVARAVRF 1463 Query: 424 ENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTLSRS 483 + L ++ + A FF +L L + IA ++ EI RL FL +VGL YL L R+ Sbjct: 1464 RDLGLHQLAAQPVDRAAGFFADLALNERETDIARDLVSEIRGRLAFLQHVGLGYLALDRA 1523 Query: 484 AETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIV 543 A TLSGGEAQRIRLA+Q+G+ L GV Y+LDEP+IGLH RDN LL TL LRD GNT++V Sbjct: 1524 APTLSGGEAQRIRLAAQLGSNLRGVCYILDEPTIGLHPRDNRLLLDTLEALRDRGNTLLV 1583 Query: 544 VEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEVPKK 603 VEHDED IR ADHVID+GPGAGV GG VVAEG + ++A PES TG+ + + + Sbjct: 1584 VEHDEDTIRRADHVIDLGPGAGVRGGRVVAEGTIADLLAAPESATGECFRHPLQHPLRPR 1643 Query: 604 RVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLN 663 R A +++ GA +NL+D+ + +P+ T +TGVSGSGKS+L D + + +L Sbjct: 1644 RAVALENPAIRIEGANLHNLRDIDVRIPLARLTVVTGVSGSGKSSLARDVIHANLRARLG 1703 Query: 664 GATIAEPAP---------------YRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVF 708 + G +V+++DQ+PIG+TPRS PATY G + Sbjct: 1704 DPEATRARRRGQAQPEAVDQPLVGCAAMPGWHQVGRVLEVDQTPIGKTPRSCPATYVGFW 1763 Query: 709 TPVRELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKG 768 +R+LFA ++R RG+ RFSFN GRC C G G VEM FLPD+ PC+ C G Sbjct: 1764 DAIRKLFADTFDARTRGWNASRFSFNTGAGRCPVCDGAGQTTVEMSFLPDVKTPCEACGG 1823 Query: 769 KRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSAT 828 R+N ETL +++K +T+ EVL M ++EA +FF A PA+A LQ L DVGL Y+ LGQ + Sbjct: 1824 ARFNPETLSVRWKDRTVAEVLAMPVDEAVDFFSAHPAIAHPLQLLQDVGLGYLTLGQPSP 1883 Query: 829 TLSGGEAQRVKLARELSKRGTGQ----------------TLYILDEPTTGLHFADIQQLL 872 TLSGGEAQR+KL EL+K +LY+LDEPT GLH AD+ +L+ Sbjct: 1884 TLSGGEAQRIKLVTELAKVRRRPGDAEDTGGVPLPADKHSLYVLDEPTVGLHMADVDKLI 1943 Query: 873 DVLHKLRDQGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHT 932 VLH+L D G+T++VIEH+LDV+ ADW++DLGPEGG GGG ++ G PE SHT Sbjct: 1944 RVLHRLTDAGHTVLVIEHDLDVMAEADWLIDLGPEGGEGGGRVVAEGPPEVAMATPESHT 2003 Query: 933 ARFLKPML 940 R L+ L Sbjct: 2004 GRHLREFL 2011 Score = 610 bits (1572), Expect = e-172, Method: Composition-based stats. Identities = 242/540 (44%), Positives = 332/540 (61%), Gaps = 24/540 (4%) Query: 423 VENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTLSR 482 V+ + + + + + L L G + E +L EI RL +L +VGL YLTL R Sbjct: 523 VQGLAIHELMALPVDRIRDAIAALALPGVADEATELVLGEIRSRLTYLADVGLGYLTLDR 582 Query: 483 SAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVI 542 + TLSGGE QRI L + +G LV ++VLDEPSIGLH RD R+LG + LRD GNT++ Sbjct: 583 QSRTLSGGEVQRINLTTALGTSLVNTLFVLDEPSIGLHPRDIGRILGVMTRLRDAGNTLV 642 Query: 543 VVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEVPK 602 VVEHD + AAD +++IGPG G GG++VA G I A P+S+TG +++G ++I+V + Sbjct: 643 VVEHDPQVMVAADELLEIGPGPGERGGDIVARGTPAEIAANPDSVTGPWLAGTKRIDVDR 702 Query: 603 KRVPANP-EKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQ 661 P + LKL GAR +NL+D+T+ P+ TC+TGVSGSGKSTLI D LFP + Sbjct: 703 PPRPVDAATPRLKLVGARQHNLRDLTVGFPLRRLTCLTGVSGSGKSTLIQDVLFPALAKH 762 Query: 662 LNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPES 721 G P + ++ +++ V+ +DQSPIG++ RSNP +Y G + P+R LFA +PE+ Sbjct: 763 F-GEAAESPGVFDRLENVDNLRGVVMVDQSPIGKSSRSNPVSYVGAWDPIRALFAALPEA 821 Query: 722 RARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKYK 781 + RGYTPG FSFN GRC C G G VEM FL D+++ C C GKRY E LE+++ Sbjct: 822 KQRGYTPGTFSFNAGHGRCPTCTGSGFEHVEMQFLSDVWLRCPDCDGKRYRPEVLELQWN 881 Query: 782 GKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLA 841 G ++ +VL++T+ EA + F P + L L DVGL Y+RLGQ TLSGGEAQR+KLA Sbjct: 882 GLSVADVLELTVHEALDVFREHPKVLAALAPLADVGLDYLRLGQPVPTLSGGEAQRLKLA 941 Query: 842 RELSKRGTGQT----------------------LYILDEPTTGLHFADIQQLLDVLHKLR 879 L++ + L++ DEPTTGLHF D+ +LL KL Sbjct: 942 GHLAEAAQKKPVRKASVVDKFGDKAGDKTEPGLLFLFDEPTTGLHFEDVAKLLGAFDKLL 1001 Query: 880 DQGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLKPM 939 G++++VIEHNLDVI +DWI+DLGPEGG GG I+V G PE V +SHT L+ Sbjct: 1002 QAGHSLIVIEHNLDVIAASDWIIDLGPEGGEDGGAIVVEGPPEAVRAHASSHTGAALRDY 1061 Score = 451 bits (1161), Expect = e-125, Method: Composition-based stats. Identities = 149/438 (34%), Positives = 217/438 (49%), Gaps = 35/438 (7%) Query: 2 DKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYA 61 D I +RGAR +NL+N++L +P ++L VVTG+SGSGKSSL FDTLYAEGQRRYVE+ S YA Sbjct: 19 DAIRIRGARQNNLRNLSLDLPLNRLTVVTGVSGSGKSSLVFDTLYAEGQRRYVETFSPYA 78 Query: 62 RQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCP 121 RQFL M+KP VD IEG+ PAI+I+Q + RSTVGT+TE+ D+ +LL+AR C Sbjct: 79 RQFLDRMDKPQVDRIEGVPPAIAIDQTNPVRTSRSTVGTMTELADHFKLLYARAAHLHCR 138 Query: 122 DHDVPLAAQTVSQMVDNVLSQPE---GKRLMLLAPIIKERKGEHTKTLENLASQGYIRA- 177 P+ + + ++ ++ RL++ P+ + LA+QGY R Sbjct: 139 CCGKPVRRDSAVSIAADLRARAAAAGDPRLVVCFPVTVPSSFSEEEVTGLLAAQGYTRIQ 198 Query: 178 -RIDGEVCDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVA- 235 R+ G + D ++VV DRF+ + RLAE+ E AL+ G V Sbjct: 199 ERLAGVGAEGQDV----------LQVVQDRFRASNAEDSRLAEALEAALQRGHGRLAVYA 248 Query: 236 ---------DMDDPKAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQ 286 P +S+ C C E P LFSFN+P GAC TC G G Sbjct: 249 SGEGVRAEKSAGTPGEAVWRYSSGLHCADCDIHYSEATPGLFSFNSPIGACETCRGFGRV 308 Query: 287 QYFDPDRVIQNPELSLAGGAIRGWDRRNFYYFQM-LKSLADHYKFDVEAPWGSLSANVHK 345 D V+ + +LA GAI+ W ++ Q L+ +A Y ++ P L + Sbjct: 309 IGVDFGLVVPDESKTLAEGAIKPWQTESYRECQQDLEKMAKKYGVAMDIPVRDLPPEHRQ 368 Query: 346 VVLYGSGKENIEFKYMNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRP 405 + G K D+S R+ + GV H + + +R L+++ S Sbjct: 369 WLFEGDPKWK--------NWDSSWPRYWY-GVRHFFDWLETKAYKMHIRVLLSRYRSYTE 419 Query: 406 CASCEGTRLRREARHVYV 423 C +C G RL+ +A + Sbjct: 420 CPACHGARLKPDALLWRL 437 Score = 217 bits (553), Expect = 2e-54, Method: Composition-based stats. Identities = 107/410 (26%), Positives = 165/410 (40%), Gaps = 104/410 (25%) Query: 399 KFISNRP--CASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIA 456 +F+S+ C C+G R R E + + + ++++ A++ F Sbjct: 854 QFLSDVWLRCPDCDGKRYRPEVLELQWNGLSVADVLELTVHEALDVFRE----------- 902 Query: 457 EKILKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGL----------- 505 ++ L L +VGL+YL L + TLSGGEAQR++LA + Sbjct: 903 ---HPKVLAALAPLADVGLDYLRLGQPVPTLSGGEAQRLKLAGHLAEAAQKKPVRKASVV 959 Query: 506 ------------VGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRA 553 G++++ DEP+ GLH D +LLG L G+++IV+EH+ D I A Sbjct: 960 DKFGDKAGDKTEPGLLFLFDEPTTGLHFEDVAKLLGAFDKLLQAGHSLIVIEHNLDVIAA 1019 Query: 554 ADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSG------------------K 595 +D +ID+GP G GG +V EGP EA+ A S TG + Sbjct: 1020 SDWIIDLGPEGGEDGGAIVVEGPPEAVRAHASSHTGAALRDYAEALARTRAGNRGLSPVS 1079 Query: 596 RKIEVPKKRVPANPE-----------------------------------------KVLK 614 E P R ++ Sbjct: 1080 ADAEAPGSRRSGASRDHGGSGRAVATESAIAACAAPTGDRSLVAAEPRVEYRPVAAPAIE 1139 Query: 615 LTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQL------NGATIA 668 + AR +NLK+V+L +P FT ITG+SGSGKSTL D +F QR+ Sbjct: 1140 IRHAREHNLKNVSLQIPRDQFTVITGLSGSGKSTLAFDIVFGEGQRRYLESLNAYARQFV 1199 Query: 669 EPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGV 718 +PA D+ GL + I+Q +S AT T + +R ++ + Sbjct: 1200 QPASRPDVDGLFGIPPTVAIEQRTSRGGRKSTVATLTEIHPFLRLMYVKL 1249 Score = 100 bits (248), Expect = 4e-19, Method: Composition-based stats. Identities = 41/122 (33%), Positives = 62/122 (50%), Gaps = 6/122 (4%) Query: 605 VPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNG 664 PA+ +++ GAR NNL++++L LP+ T +TGVSGSGKS+L+ DTL+ QR+ Sbjct: 13 APASISDAIRIRGARQNNLRNLSLDLPLNRLTVVTGVSGSGKSSLVFDTLYAEGQRRYVE 72 Query: 665 ATIAEPAPYRDIQGLEHFDKV------IDIDQSPIGRTPRSNPATYTGVFTPVRELFAGV 718 + D D++ I IDQ+ RT RS T T + + L+A Sbjct: 73 TFSPYARQFLDRMDKPQVDRIEGVPPAIAIDQTNPVRTSRSTVGTMTELADHFKLLYARA 132 Query: 719 PE 720 Sbjct: 133 AH 134 Score = 90.8 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 38/142 (26%), Positives = 62/142 (43%), Gaps = 32/142 (22%) Query: 3 KIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYAR 62 ++++ GAR HNL+++ + P +L +TG+SGSGKS+L D L+ A A+ Sbjct: 713 RLKLVGARQHNLRDLTVGFPLRRLTCLTGVSGSGKSTLIQDVLF-----------PALAK 761 Query: 63 QFLSLMEKPDV----DHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFA----- 113 F E P V ++++ L + ++Q + RS + D +R LFA Sbjct: 762 HFGEAAESPGVFDRLENVDNLRGVVMVDQSPIGKSSRSNPVSYVGAWDPIRALFAALPEA 821 Query: 114 ------------RVGEPRCPDH 123 G RCP Sbjct: 822 KQRGYTPGTFSFNAGHGRCPTC 843 >UniRef50_Q9PK60 UvrABC system protein A n=10 Tax=Chlamydia RepID=UVRA_CHLMU Length = 1787 Score = 893 bits (2309), Expect = 0.0, Method: Composition-based stats. Identities = 337/939 (35%), Positives = 512/939 (54%), Gaps = 30/939 (3%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 63 + + G NLKN+ + ++++ TG+SGSGKSSLAF+T+YA G++RY+ +L ++ Sbjct: 5 VRLSGITVRNLKNVTVEFCPREIVLFTGVSGSGKSSLAFNTIYAAGRKRYITTLPSFFAT 64 Query: 64 FLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCPDH 123 + + P V +EGLSP ++++Q + + +TVG+ TEI+ YL LLF+ G+ P Sbjct: 65 RIHSLPDPAVKKVEGLSPTVAVKQNFFAQHVHATVGSTTEINSYLALLFSLDGQAYDPIT 124 Query: 124 DVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARIDGEV 183 PL + +++ + + P+G +L LLAP+ G+ + E L QG+ + IDGE+ Sbjct: 125 LRPLTLYSKEKILAEIAAIPDGTQLTLLAPL---PAGDILRVRECLR-QGFTKILIDGEI 180 Query: 184 CDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVADMDDPKAE 243 + L ++++D T RL S T L++ G + + Sbjct: 181 SPIHK--FLATGVPVPSQLIIDTLIKNASNTPRLKVSLFTTLDIGHGECCLHF----DNQ 234 Query: 244 ELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGV-QQYFDPDRVIQNPELSL 302 + +FS P + L P LFS ++ CP C G G+ DP + QN + Sbjct: 235 KRVFSTQTTLPETQNTYTPLSPDLFSSHSHKDRCPQCHGSGIFVSINDPSIIQQNLSIEK 294 Query: 303 AGGAIRGWDRRNFYYFQMLKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKENIEFKYMN 362 G Y + +SLAD+ F + PW LS + + LYG ++ K + Sbjct: 295 NCCPFAG-SCSILLYKTIYQSLADNLGFSLSTPWQDLSPEIQHIFLYGKEGLSLPVKLFD 353 Query: 363 DR-GDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGTRLRREARHV 421 G T+ ++GVL+ + + + + L K S C C+ T L A Sbjct: 354 GTLGKTTQTHKQWKGVLNEIGEKIRFANKPS--RYLPKGTSYTECPRCQKTGLSDYANAA 411 Query: 422 YVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTLS 481 + MS+ F N L + E++++ + RL L+++GL YL+ Sbjct: 412 KWHGKSFADLQQMSLQELFIFLNQL---PPKDPAIEEVIQGLKARLAMLIDLGLPYLSPE 468 Query: 482 RSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTV 541 RS TLSGGE +R LA +GA L+GV YVLDEPSIGLH +D +L+ + LRD GNT+ Sbjct: 469 RSVNTLSGGEQERTALAKHLGAELMGVTYVLDEPSIGLHPQDTYKLMDVIKKLRDQGNTI 528 Query: 542 IVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEVP 601 ++VEHDE I AD VID+GPGAG+ GGEVV G + +A SLT QY+ +++I +P Sbjct: 529 LLVEHDEQMISLADRVIDVGPGAGIFGGEVVFNGTPKEFLANSHSLTAQYLRQEQQIPIP 588 Query: 602 KKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQ 661 KR + + L+ A +NLK++T+++P+G T +TGVSGSGKS+LINDTL P + Sbjct: 589 AKRQTSLGS--ITLSRANKHNLKNLTVSIPLGQLTVVTGVSGSGKSSLINDTLVPCVEEF 646 Query: 662 LNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPES 721 + + P +QG +++ I++ GR+ RS TY F +R+LFA P Sbjct: 647 IEQGSC----PNLAVQG--KLSRLVHINRDLPGRSQRSISLTYIKAFDELRQLFAEQPRC 700 Query: 722 RARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKYK 781 + G T FSFN G C C G G I + + C C GKR+ + LEI+YK Sbjct: 701 KPLGLTKSHFSFNTPLGACSECGGLGSITAMDN---QDSITCPSCSGKRFLPQVLEIRYK 757 Query: 782 GKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLA 841 KTI ++L+MT EA FF P++ K+Q L +GL Y+ LG+ +LSGGE QR+KLA Sbjct: 758 NKTIADILEMTAYEAESFFLDQPSIHNKIQALCTLGLQYLPLGRPLYSLSGGEIQRLKLA 817 Query: 842 RELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADWI 901 ELS TLY+LDEPTTGLH D++QL+ VL L DQG+++V+IEHN+ V+K AD++ Sbjct: 818 CELSNPVKHPTLYVLDEPTTGLHTHDVKQLIHVLQSLTDQGHSVVIIEHNMHVVKIADYV 877 Query: 902 VDLGPEGGSGGGEILVSGTPETVAECEASHTARFLKPML 940 ++LGPEGG+ GG ++ S +PE + + + T+ L+P L Sbjct: 878 LELGPEGGNKGGCLIASCSPEELIH-KHTPTSLALRPFL 915 Score = 432 bits (1111), Expect = e-119, Method: Composition-based stats. Identities = 216/919 (23%), Positives = 374/919 (40%), Gaps = 83/919 (9%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 63 I + A HNLK+I++ IPR L VTG S SGK SL FD L+A G Y E Y RQ Sbjct: 937 IIITNAHHHNLKHIDVSIPRYALTTVTGPSASGKHSLVFDVLHAAGNISYAELFPPYIRQ 996 Query: 64 -FLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCPD 122 + P VD + GLSP I+IE+ S ++ S V + EI D L LF ++G P P Sbjct: 997 ALIKKTPLPSVDKVIGLSPVIAIEKNSAKNSSHS-VASALEISDMLEELFTQIGRPYSPV 1055 Query: 123 HDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARIDGE 182 L + + + +L + + P + + + + +G+++ + + Sbjct: 1056 SGDLLKEVSPQTIAEELLENYAQGYVTITIPF--PPEEDFFSYTQEMLREGFLKLYANEQ 1113 Query: 183 VCDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVADMDDPKA 242 + DL P L+ +V+ K+ + + S A S + + + Sbjct: 1114 LYDLEGPFPDCLESPA---LVIHHVKILEKNIPSILSSLSLAFSKSS-SIRLHIENYGIT 1169 Query: 243 EELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPELSL 302 + G S S +N CP C G G SL Sbjct: 1170 TSKTYQLGLQ-DSLGNSFP-------SNDNTTHLCPFCHGNG----------------SL 1205 Query: 303 AGGAIRGWDRRNFYYFQMLKSLADHYKFDVEAPWGSLSAN--VHKVVLYGSGKENIEFKY 360 + +I + R + + + D P L + + L+ + Sbjct: 1206 STFSILPYKNRFAEHTPLSLFTSLFPNQDP-TPIYPLLEELGIPSIALFQEMDD----HS 1260 Query: 361 MNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGTRLRREARH 420 +++ F+ + + T IS PC C+G Sbjct: 1261 FQKLCLGTLQNPGFDALCTKAMLAHPTTNFPTYL------ISETPCNQCQGNGTYTYEHC 1314 Query: 421 VYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTL 480 + + L I + +F +L ++ +I +L+ L VGL+ + L Sbjct: 1315 TRIHDISLSDIYQSDVPFLKKFLLSLGKD-------LPLVSDIFQKLELLERVGLSQVIL 1367 Query: 481 SRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNT 540 + +LS GE ++ LA +GL V+Y+L++P G+H +D LL + L NT Sbjct: 1368 GQEQSSLSDGERYQLLLAKAFSSGLTDVIYLLEDPLAGIHPKDAPSLLSVIKDLVANHNT 1427 Query: 541 VIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEV 600 V+V + + + ADHVI +GP G +GG ++ + + +S K + V Sbjct: 1428 VVVTDREGSLSKHADHVIHLGPEPGPNGGYLLETSAFRDLQPISQSTYISDQIPKLSVSV 1487 Query: 601 PKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQR 660 + + L++P+ + I+GVSGSGK+TL+ + ++ Sbjct: 1488 LTSAIQID------------------NLSIPLRSLSTISGVSGSGKTTLLLEGIYKSGCA 1529 Query: 661 QLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPE 720 L + F ++I +D P + RS+ +TY + +R F+ + + Sbjct: 1530 MLE-------------KDPSLFSEIIFLDSHPQPASSRSDISTYFDIAPSLRNFFSSLTQ 1576 Query: 721 SRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKY 780 ++A + FS N + G+C C G G ++ F C C G R E+ Y Sbjct: 1577 AKALNISASMFSPNTKQGQCSDCWGLGYQLIDRAFYAMEKRSCPTCGGFRVQPLVQEVVY 1636 Query: 781 KGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKL 840 +GK ++L ++ E + F + + + LQTL+ GL Y+ LGQ+ ++LS E +K+ Sbjct: 1637 EGKHFGQLLQSSLNEVAKDFSFLKKVQKPLQTLIANGLGYLPLGQNMSSLSLSEKIAIKI 1696 Query: 841 ARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADW 900 + L TL++LD T L LL L L G+T+V+IE++ + AD+ Sbjct: 1697 TKYLFLPPKHPTLFLLDGVATSLDNQQKYTLLSQLKTLVSLGHTVVIIENHPAFSQYADF 1756 Query: 901 IVDLGPEGGSGGGEILVSG 919 ++ +G + I+ SG Sbjct: 1757 LIQMGHKTDKTSSRIIFSG 1775 Score = 212 bits (540), Expect = 5e-53, Method: Composition-based stats. Identities = 90/335 (26%), Positives = 159/335 (47%), Gaps = 31/335 (9%) Query: 406 CASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGD 465 C SC G R + + +N + I +M+ A FF + I + Sbjct: 739 CPSCSGKRFLPQVLEIRYKNKTIADILEMTAYEAESFFLD--------------QPSIHN 784 Query: 466 RLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLV-GVMYVLDEPSIGLHQRDN 524 +++ L +GL YL L R +LSGGE QR++LA ++ + +YVLDEP+ GLH D Sbjct: 785 KIQALCTLGLQYLPLGRPLYSLSGGEIQRLKLACELSNPVKHPTLYVLDEPTTGLHTHDV 844 Query: 525 ERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMA-- 582 ++L+ L L D G++V+++EH+ ++ AD+V+++GP G GG ++A E ++ Sbjct: 845 KQLIHVLQSLTDQGHSVVIIEHNMHVVKIADYVLELGPEGGNKGGCLIASCSPEELIHKH 904 Query: 583 VPESLT-GQYMSGKRKIE-VPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITG 640 P SL ++S +++ +P R + +T A +NLK + +++P T +TG Sbjct: 905 TPTSLALRPFLSQHQELPHLPDLRQQPPIPAAIIITNAHHHNLKHIDVSIPRYALTTVTG 964 Query: 641 VSGSGKSTLINDTL-------FPIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPI 693 S SGK +L+ D L + + + P + + VI I+++ Sbjct: 965 PSASGKHSLVFDVLHAAGNISYAELFPPYIRQALIKKTPLPSVDKVIGLSPVIAIEKNSA 1024 Query: 694 GRTPRSNPATYTGVFTPVRELFAGVPESRARGYTP 728 + S A+ + + ELF + R Y+P Sbjct: 1025 KNSSHS-VASALEISDMLEELFTQIG----RPYSP 1054 Score = 86.5 bits (213), Expect = 4e-15, Method: Composition-based stats. Identities = 42/125 (33%), Positives = 58/125 (46%), Gaps = 14/125 (11%) Query: 1 MDKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAY 60 + I + A HNLKN+ + IP +L VVTG+SGSGKSSL DTL Sbjct: 595 LGSITLSRANKHNLKNLTVSIPLGQLTVVTGVSGSGKSSLINDTLV------------PC 642 Query: 61 ARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRC 120 +F+ P++ LS + I + + RS T + D LR LFA +PRC Sbjct: 643 VEEFIEQGSCPNLAVQGKLSRLVHINRDLPGRSQRSISLTYIKAFDELRQLFAE--QPRC 700 Query: 121 PDHDV 125 + Sbjct: 701 KPLGL 705 Score = 64.6 bits (156), Expect = 2e-08, Method: Composition-based stats. Identities = 26/117 (22%), Positives = 54/117 (46%), Gaps = 6/117 (5%) Query: 611 KVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNG------ 664 +++L+G NLK+VT+ TGVSGSGKS+L +T++ +++ Sbjct: 3 SIVRLSGITVRNLKNVTVEFCPREIVLFTGVSGSGKSSLAFNTIYAAGRKRYITTLPSFF 62 Query: 665 ATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPES 721 AT P ++ +E + + Q+ + + + T + + + LF+ ++ Sbjct: 63 ATRIHSLPDPAVKKVEGLSPTVAVKQNFFAQHVHATVGSTTEINSYLALLFSLDGQA 119 >UniRef50_Q9Z985 UvrABC system protein A n=5 Tax=Chlamydophila RepID=UVRA_CHLPN Length = 1826 Score = 880 bits (2273), Expect = 0.0, Method: Composition-based stats. Identities = 339/940 (36%), Positives = 518/940 (55%), Gaps = 31/940 (3%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 63 + V G + NLKN+++ ++++++TG+SGSGKSS+AFDTLYA G++RY+ +L + Sbjct: 6 VYVSGIKVRNLKNVSIHFNSEEIVLLTGVSGSGKSSIAFDTLYAAGRKRYISTLPTFFAT 65 Query: 64 FLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCPDH 123 ++ + P V+ I GLSP I+I+Q SH +TVG+ TE+ +L LLF G+ R P Sbjct: 66 TITTLPNPKVEEIHGLSPTIAIKQNHFSHYSHATVGSTTELFSHLALLFTLEGQARDPKT 125 Query: 124 DVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARIDGEV 183 L + +++ ++ EG ++ +LAP++++ + A QG+ + R +G + Sbjct: 126 KEVLDLYSKEKVLSTIMELSEGVQISILAPLLRKD----IAAIHEYAQQGFTKVRCNGTI 181 Query: 184 CDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVADMDDPKAE 243 + + + ++++V+D ++ RL S TALE G V E Sbjct: 182 HPIYSFLTSGIPEDCSVDIVIDTLIKSENNIARLKVSLFTALEFGEGHCSVL----SDEE 237 Query: 244 ELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPELSL- 302 + FS Y+ L +LFS + C C G G+ D +I + LS+ Sbjct: 238 LMTFSTKQQIDDVTYT--PLTQQLFSPHALESRCSLCQGSGIFISIDNPLLI-DENLSIK 294 Query: 303 -AGGAIRGWDRRNFYYFQMLKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKENIEFKYM 361 + G + ++ Y + ++LAD F++E PW LS + + L G + + Sbjct: 295 ENCCSFAG-NCSSYLYHTIYQALADALNFNLETPWKDLSPEIQNIFLRGKNNLVLPVRLF 353 Query: 362 NDR-GDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGTRLRREARH 420 + G ++ + GVL+++ + + T + L+K +S C+ C+GT L A Sbjct: 354 DQTLGKKNLTYKVWRGVLNDIGDKVRYTTKPS--RYLSKGMSAHSCSLCKGTGLGDYASV 411 Query: 421 VYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTL 480 E MS+ + FF+ +K + ++IL+ + RL FL+++GL YLT Sbjct: 412 ATWEGKTFTEFQQMSLNNWHVFFSKVKSP---SLSIQEILQGLKQRLSFLIDLGLGYLTP 468 Query: 481 SRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNT 540 +R+ TLSGGE +R +A +G L G+ Y+LDEPSIGLH +D E+L+G + LRD GNT Sbjct: 469 NRALATLSGGEQERTAIAKHLGGELFGITYILDEPSIGLHPQDTEKLIGVIKKLRDQGNT 528 Query: 541 VIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEV 600 VI+VEH+E I AD +IDIGPGAG+ GGEV+ G E + SLT +Y+ + I + Sbjct: 529 VILVEHEERMISLADRIIDIGPGAGIFGGEVLFNGKPEDFLMNSSSLTAKYLRQELTIPI 588 Query: 601 PKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQR 660 P+ R P L LT A +NLK++++ LP+ +TGVSGSGKS+LIN+TL P + Sbjct: 589 PESREA--PTSWLLLTEATIHNLKNLSIRLPLARLIGVTGVSGSGKSSLINNTLVPAIES 646 Query: 661 QLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPE 720 L ++I I + GR+ RS P TY F +RELFA P Sbjct: 647 FLKQENPKNLHFE-----WGCIGRLIHITRDLPGRSQRSIPLTYIKAFDDIRELFASQPR 701 Query: 721 SRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKY 780 S +G T FSFN G C CQG G + + D +PC +C+GKRY+ E LEI Y Sbjct: 702 SLRQGLTKAHFSFNQPQGACIQCQGLGTMTISD---DDTPIPCSECQGKRYHSEVLEILY 758 Query: 781 KGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKL 840 +GK I ++LDMT EA +FF + P + K+ L + L Y+ LG+ +TLSGGE QR+KL Sbjct: 759 EGKNIADILDMTAYEAEKFFISHPKIHEKIHALCSLRLDYLPLGRPLSTLSGGEIQRLKL 818 Query: 841 ARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADW 900 A EL QTLY+LDEPTTGLH DIQ L++VL L G+T++VIEHN+ V+K D+ Sbjct: 819 AHELLFASPKQTLYVLDEPTTGLHTHDIQALIEVLLSLTYLGHTVLVIEHNMHVVKVCDY 878 Query: 901 IVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLKPML 940 +++LGPEGG GG +L S TP+ + + + TA+ L P + Sbjct: 879 VLELGPEGGDLGGYLLASCTPKDLIQL-NTPTAKALAPYI 917 Score = 535 bits (1378), Expect = e-150, Method: Composition-based stats. Identities = 244/940 (25%), Positives = 430/940 (45%), Gaps = 66/940 (7%) Query: 3 KIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYAR 62 I ++ A +NLK+I+L +PR+ LI + G SGK SL FD LYA G Y E Y R Sbjct: 938 DILIKDAYQNNLKHIDLALPRNSLIAIAGPGASGKHSLVFDILYASGNIAYAELFPPYIR 997 Query: 63 Q-FLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCP 121 Q L P V ++GLSP IS+ + S+S+ T+ + + + L LFA +GEP P Sbjct: 998 QGLLKETPLPSVGEVKGLSPVISVRKCSSSNRSYHTIASALGLSNGLEKLFAILGEPFSP 1057 Query: 122 DHDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARIDG 181 + L+ T ++D++L + + + +PI E L+ +G+I+ +G Sbjct: 1058 LTEEKLSKTTPQTIIDSLLKSYKDDYVTITSPIPLGSDLEI--FLQEKQKEGFIKLYSEG 1115 Query: 182 EVCDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVADMDDPK 241 + DL + L L + +V+ KV + L + A LS + + K Sbjct: 1116 NLYDLDERLPLNLIEPA---IVIQHTKVSPKNSSSLLSAISVAFSLS---SEIWIYISQK 1169 Query: 242 AEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPELS 301 + L + G E+ +L S ++P G C TC G G S Sbjct: 1170 KQRKLSYSLGWKDKKGRLYPEITHQLLSSDHPEGRCLTCGGRGEILKI-----------S 1218 Query: 302 LAGGAIRGWDRRNFYYFQMLKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKENIEFKYM 361 L + ++ L+ + + P L + + + ++ Sbjct: 1219 LEE------HKEKIAHYTPLEFFSLFFPKSYMKPVQKLLKDE-------NASQPLKLLTT 1265 Query: 362 NDRGDTSIRRHPFEGVLHNMERRYK-ETESSAVREELAKFISNRPCASCEGTRLRREARH 420 + + F G+ + + E++S ++ LA C +C+G+ L A + Sbjct: 1266 KEFLNFCRGSSEFPGMNALLMEQLDTESDSPLIKPLLA----LTSCPACKGSGLNDYANY 1321 Query: 421 VYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTL 480 V + NT L I F N + R+ I++++ +RL F+ VGL+Y+TL Sbjct: 1322 VRINNTSLLDIYQEDATFLESFLNTIGTDDTRS-----IIQDLMNRLTFISKVGLSYITL 1376 Query: 481 SRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNT 540 + +TLS GE R+ LA +I L ++Y+ +EP GLH +D ++ L L NT Sbjct: 1377 GQRQDTLSDGENYRLHLAKKISINLTNIVYLFEEPLSGLHPQDLPTIVQLLKELVANNNT 1436 Query: 541 VIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGP-----LEAIMAVPESLTGQYMSGK 595 VI + I ADH I +GPG+G GG ++ ++ VP++ K Sbjct: 1437 VIATDRSCSLIPHADHAIFLGPGSGPQGGFLMDSDTEVCPSVDLHANVPQTEV----CPK 1492 Query: 596 RKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLF 655 + + K ++ LK+ ++++++ ++ P+ I GVSGSGK++L+ + Sbjct: 1493 APLSISKANHTRGSDRTLKV-NLSIHHIQNLKVSAPLHALVAIGGVSGSGKTSLLLEGFK 1551 Query: 656 PIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELF 715 A+ + +G F ++ ID PI + RS+ +TY + +R + Sbjct: 1552 KQAELLI-------------AKGTTTFSDLVVIDSHPIASSQRSDISTYFDIAPSLRAFY 1598 Query: 716 AGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRET 775 A + +++A + FS N + G+C CQG G ++ F PC C G R Sbjct: 1599 ASLTQAKALNISSTMFSTNTKQGQCSDCQGLGYQWIDRAFYALEKRPCPTCSGFRIQPLA 1658 Query: 776 LEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEA 835 E+ Y+GK E+L IE F + + + L+ L+D+GL Y+ +GQ ++LS E Sbjct: 1659 QEVLYEGKHFGELLHTPIETVALRFPFIKKIQKPLKALLDIGLGYLPIGQKLSSLSVSEK 1718 Query: 836 QRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVI 895 +K A L + TL+++DE + L Q L + L L + G++++ I+H++ ++ Sbjct: 1719 TALKTAYFLYQTPETPTLFLIDELFSSLDPIKKQHLPEKLRSLINSGHSVIYIDHDVKLL 1778 Query: 896 KTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARF 935 K+AD+++++GP G GG++L SG+P+ + + S ++ Sbjct: 1779 KSADYLIEIGPGSGKQGGKLLFSGSPKDIYASKDSLLKKY 1818 Score = 130 bits (327), Expect = 2e-28, Method: Composition-based stats. Identities = 51/197 (25%), Positives = 93/197 (47%), Gaps = 15/197 (7%) Query: 401 ISNRPCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKIL 460 + RPC +C G R++ A+ V E + I F + Sbjct: 1641 LEKRPCPTCSGFRIQPLAQEVLYEGKHFGELLHTPIETVALRF--------------PFI 1686 Query: 461 KEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGL-VGVMYVLDEPSIGL 519 K+I LK L+++GL YL + + +LS E ++ A + ++++DE L Sbjct: 1687 KKIQKPLKALLDIGLGYLPIGQKLSSLSVSEKTALKTAYFLYQTPETPTLFLIDELFSSL 1746 Query: 520 HQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEA 579 + L L L + G++VI ++HD +++AD++I+IGPG+G GG+++ G + Sbjct: 1747 DPIKKQHLPEKLRSLINSGHSVIYIDHDVKLLKSADYLIEIGPGSGKQGGKLLFSGSPKD 1806 Query: 580 IMAVPESLTGQYMSGKR 596 I A +SL +Y+ + Sbjct: 1807 IYASKDSLLKKYICNEE 1823 >UniRef50_C9YE98 Putative uncharacterized protein n=1 Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9YE98_9BURK Length = 1850 Score = 865 bits (2234), Expect = 0.0, Method: Composition-based stats. Identities = 329/958 (34%), Positives = 471/958 (49%), Gaps = 137/958 (14%) Query: 3 KIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYAR 62 I +RGAR HNLKN++L I +L VVTG SGSGKSSL FDTLYAEGQRRYVE+ SAYAR Sbjct: 88 TIRIRGARQHNLKNLDLDIRTGELTVVTGPSGSGKSSLVFDTLYAEGQRRYVETFSAYAR 147 Query: 63 QFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCPD 122 QFL M+KP VD +EG+ PAI+I+Q + + RSTVGT+TE++D+L+LLF+R G D Sbjct: 148 QFLDRMDKPAVDKVEGVPPAIAIDQTNPVRSSRSTVGTMTELNDHLKLLFSRAGSLFDKD 207 Query: 123 HDVPLAAQTVSQMVDNVLSQPEGK---RLMLLAPIIKERKGEHTKTLENLASQGYIRARI 179 +P+ T + +L + + RL+L P+ + + L++ G+ R + Sbjct: 208 TALPVQHDTPETIYTTLLQRAAAEGNPRLVLTFPVELPGNATPDEVTQWLSASGFTRVQA 267 Query: 180 DGEVCDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTA------- 232 + EV ++ K+ ++VV DRF++ R+ E+ ET+L+ G Sbjct: 268 EREVSTVNGVRKV-------LDVVADRFRIDGVEKARVLEAIETSLKRGSGRLNAYVLKE 320 Query: 233 VVADMDDPKA----------EELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDG 282 +A +D +A E FS CP + +FSFN+ GAC C G Sbjct: 321 SIAPVDSTRAAPEIIANAAPEIWRFSTGLHCPQSDIRYTDPIASMFSFNSAVGACDACRG 380 Query: 283 LGVQQYFDPDRVIQNPELSLAGGAIRGWDRRNFYYFQM-LKSLADHYKFDVEAPWGSLSA 341 G D VI N +L+L GA++ + Q L A+ + PW L+A Sbjct: 381 FGRVVGVDYGLVIPNDKLTLRAGAVKPMQTPAWQECQDDLMRHAEASGIPRDTPWYKLTA 440 Query: 342 NVHKVVLYGSGKENIEFKYMNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFI 401 VL GS N ++ + GV E + +R L+K+ Sbjct: 441 EQKHWVLKGSPNWNGKW------------NQHWFGVDRFFEYLETKAYKMHIRVLLSKYR 488 Query: 402 SNRPCASCEGTRLRREARHVYVE-------------------------------NTPLPA 430 S C +C G+RL+ E+ + L Sbjct: 489 SYTTCPTCNGSRLKTESLLWRIGTKDQAYMALDPAKRFMPKGVKWSREQLEALPGLSLHD 548 Query: 431 ISDMSIGHAMEFFNNLK----------------LAGQRAKIAEKILKEIGDRLKFLVNVG 474 + M + FF+ L+ + R ++ D +V Sbjct: 549 LMLMPLDRLKRFFDALQADLGIFGGAEPGVLAGASSTRFASSKSAPSSTPDSASRSEDVA 608 Query: 475 LNYLTLSRSAETLS--------------------------------------------GG 490 N ++ + S +T+S GG Sbjct: 609 PNTVSAATSEKTVSAPTASEAEHKTLKLLFEEVGTRLKYLCDVGIGYLTLDRQSRTLSGG 668 Query: 491 EAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDA 550 E QRI L + +G LV ++VLDEPSIGLH RD R++ + LRD GNT++VVEHD Sbjct: 669 EVQRINLTTALGTSLVNTLFVLDEPSIGLHPRDMNRIIVAMQRLRDAGNTLVVVEHDPAV 728 Query: 551 IRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEVPKKRVPANPE 610 + AAD +ID+GPG G GG++V +G EA+ +++TG Y+ G++++ + KR+ A Sbjct: 729 MLAADRMIDMGPGPGEKGGQIVFDGTTEALKGA-DTMTGAYLGGRKQVGMGFKRMVAPNN 787 Query: 611 KVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAEP 670 L L G +NLK+V++ +P+ C+TGVSGSGKSTLI D L P R G P Sbjct: 788 PRLILEGVTEHNLKNVSVEIPLQRLVCVTGVSGSGKSTLIQDVLAPALLRHF-GKATETP 846 Query: 671 APYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESRARGYTPGR 730 + + G E ++ +DQSPIG+T RSNP +Y G + +RELFAG SR R YT + Sbjct: 847 GAHTSLLGAEQLSDMVFVDQSPIGKTARSNPVSYVGAWDAIRELFAGAALSRERSYTAAK 906 Query: 731 FSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKYKGK----TIH 786 FSFN GRC C G G VEM FL D+Y+ C C GKRY E LE+ + K + Sbjct: 907 FSFNSGDGRCPTCGGSGFEHVEMQFLSDVYLRCPDCDGKRYRPEILEVTIERKGRHVNVA 966 Query: 787 EVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLAREL 844 +VL++T+ EA + F A + R LQ ++DVGL Y++LGQ TLSGGEAQR+KLA L Sbjct: 967 DVLELTVSEAADLFSADREVIRVLQPIVDVGLEYVKLGQPVPTLSGGEAQRLKLAGFL 1024 Score = 311 bits (796), Expect = 1e-82, Method: Composition-based stats. Identities = 150/489 (30%), Positives = 226/489 (46%), Gaps = 73/489 (14%) Query: 120 CPDHDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARI 179 C + Q+ + +L G+ + LLAP+++ RKG +T+ + +G+ R+ Sbjct: 1251 CYKDGAAVEPQSADSIAAQLLKNYRGQHIGLLAPLVQGRKGVYTELADWARPKGFTHLRV 1310 Query: 180 DGEVCDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVADMDD 239 DG S P+++ K+H IE+ V V L + AL G VV + D Sbjct: 1311 DGNFLPTSGFPRIDRFKEHNIELPVASLDVTPANESALRTALADALTHGKG--VVYVLSD 1368 Query: 240 PKAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPE 299 + + +A + G ++FS ACP C DP Sbjct: 1369 IGSLREVMAAGESAAGVGKV------QVFS---TKRACPVCA--TSYAELDPRLF----- 1412 Query: 300 LSLAGGAIRGWDRRNFYYFQMLKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKENIEFK 359 ++ ++ + +L+ KV + K Sbjct: 1413 ---------SYNSKHGWCPD-----CVGTGV-------ALTKEQRKVF-------DDSVK 1444 Query: 360 YMNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGTRLRREAR 419 +++G E+ + E + + ++ C +C GTRL AR Sbjct: 1445 DDDNKGR---------------EQTFAEADIED--------LHDKACPTCSGTRLNATAR 1481 Query: 420 HVYVENTPLPAISDMSIGHAMEFFNNLKLAG----QRAKIAEKILKEIGDRLKFLVNVGL 475 +V + I+ +S+ ++ L++AG + I+ ++ EI RL+FL VGL Sbjct: 1482 NVKFAGVGITDIARLSVTDVRQWVQTLQVAGGMTTREGDISRDLVPEIRSRLEFLEEVGL 1541 Query: 476 NYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLR 535 YLTL R A TLSGGEAQRIRLA+Q+G+ L GV YVLDEP+IGLH RDN+ LLG L L Sbjct: 1542 GYLTLDRGAPTLSGGEAQRIRLAAQLGSNLQGVCYVLDEPTIGLHARDNKILLGALQSLS 1601 Query: 536 DLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGK 595 D GNT++VVEHDED IR ADH+IDIGP AG GG +VA+G + + PES TG+Y+ Sbjct: 1602 DKGNTLVVVEHDEDTIRHADHIIDIGPSAGKRGGRLVAQGSIADVQNAPESQTGRYLLHS 1661 Query: 596 RKIEVPKKR 604 K + +R Sbjct: 1662 MKHPLAVRR 1670 Score = 195 bits (497), Expect = 5e-48, Method: Composition-based stats. Identities = 83/253 (32%), Positives = 121/253 (47%), Gaps = 43/253 (16%) Query: 726 YTPGRFSFNVRGGRCEACQGDGV-------------IKVEM-----HFLPDIYV------ 761 P FS+N + G C C G GV +K + + + Sbjct: 1407 LDPRLFSYNSKHGWCPDCVGTGVALTKEQRKVFDDSVKDDDNKGREQTFAEADIEDLHDK 1466 Query: 762 PCDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFF------------------DAV 803 C C G R N +K+ G I ++ +++ + R++ D V Sbjct: 1467 ACPTCSGTRLNATARNVKFAGVGITDIARLSVTDVRQWVQTLQVAGGMTTREGDISRDLV 1526 Query: 804 PALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGL 863 P + +L+ L +VGL Y+ L + A TLSGGEAQR++LA +L G Y+LDEPT GL Sbjct: 1527 PEIRSRLEFLEEVGLGYLTLDRGAPTLSGGEAQRIRLAAQLGSNLQG-VCYVLDEPTIGL 1585 Query: 864 HFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPET 923 H D + LL L L D+GNT+VV+EH+ D I+ AD I+D+GP G GG ++ G+ Sbjct: 1586 HARDNKILLGALQSLSDKGNTLVVVEHDEDTIRHADHIIDIGPSAGKRGGRLVAQGSIAD 1645 Query: 924 VAECEASHTARFL 936 V S T R+L Sbjct: 1646 VQNAPESQTGRYL 1658 Score = 138 bits (349), Expect = 8e-31, Method: Composition-based stats. Identities = 52/128 (40%), Positives = 81/128 (63%), Gaps = 2/128 (1%) Query: 809 KLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADI 868 +L+ L DVG+ Y+ L + + TLSGGE QR+ L L TL++LDEP+ GLH D+ Sbjct: 644 RLKYLCDVGIGYLTLDRQSRTLSGGEVQRINLTTALGTSLVN-TLFVLDEPSIGLHPRDM 702 Query: 869 QQLLDVLHKLRDQGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECE 928 +++ + +LRD GNT+VV+EH+ V+ AD ++D+GP G GG+I+ GT E + + Sbjct: 703 NRIIVAMQRLRDAGNTLVVVEHDPAVMLAADRMIDMGPGPGEKGGQIVFDGTTEAL-KGA 761 Query: 929 ASHTARFL 936 + T +L Sbjct: 762 DTMTGAYL 769 Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats. Identities = 42/131 (32%), Positives = 64/131 (48%), Gaps = 6/131 (4%) Query: 594 GKRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDT 653 G + P +R + +++ GAR +NLK++ L + G T +TG SGSGKS+L+ DT Sbjct: 70 GCLECLSPPQRAFTMTQGTIRIRGARQHNLKNLDLDIRTGELTVVTGPSGSGKSSLVFDT 129 Query: 654 LFPIAQRQLNGATIAEPAPYRDIQGLEHFDKV------IDIDQSPIGRTPRSNPATYTGV 707 L+ QR+ A + D DKV I IDQ+ R+ RS T T + Sbjct: 130 LYAEGQRRYVETFSAYARQFLDRMDKPAVDKVEGVPPAIAIDQTNPVRSSRSTVGTMTEL 189 Query: 708 FTPVRELFAGV 718 ++ LF+ Sbjct: 190 NDHLKLLFSRA 200 >UniRef50_C4RNF2 Excinuclease ABC, A subunit n=1 Tax=Micromonospora sp. ATCC 39149 RepID=C4RNF2_9ACTO Length = 894 Score = 861 bits (2225), Expect = 0.0, Method: Composition-based stats. Identities = 388/960 (40%), Positives = 538/960 (56%), Gaps = 104/960 (10%) Query: 2 DKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYA 61 ++I +RG R HNL+ L +PR L VVTG+SGSGKSSLAFDT+YAEG R+Y++SLSA+ Sbjct: 5 ERIVLRGVRQHNLRIGELSLPRGGLTVVTGVSGSGKSSLAFDTIYAEGYRQYLDSLSAHV 64 Query: 62 RQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCP 121 R+ L + KP VD + GLSP ++IEQ++ S NPRS VGTITEI D LRLLFAR G C Sbjct: 65 RRRLPKVSKPTVDWVSGLSPTVAIEQRTISRNPRSNVGTITEISDRLRLLFARTGRHDCR 124 Query: 122 DHDVPLAAQTVSQ------------MVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENL 169 + + V V ++P+G +L + E + L Sbjct: 125 KCGTEVTPLDTAAHLAALAEAATEGPVRLVATEPDGGETEVL-------RLEAAPDADTL 177 Query: 170 ASQGYIRARIDGEVCDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSG 229 A G + R EL+ + + V+ DR VR Sbjct: 178 ADAGLLVER--------------ELRAERRLTVLRDRTPVRH------------------ 205 Query: 230 GTAVVADMDDPKAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYF 289 +A + CP CG + F+ N+PAG C C GLG Sbjct: 206 -----------------LAAGWVCPYCGTEVHATSSDWFTPNSPAGMCDHCQGLGYTYRV 248 Query: 290 DPDRVIQNPELSLAGGAIRGW-----DRRNFYYFQMLKSLADHYKFDVEAPWGSLSANVH 344 D ++ + S+ GA+ + ++ ++ + L L ++ PW L V Sbjct: 249 DAALLVGDARESVRSGALTFYGDRRRGKKTWWPQRELPDLLAEAGASLDTPWEDLPTEVG 308 Query: 345 KVVLYGSGKENIEFKYMNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNR 404 +L G E+I ER +K+ +S + F+ R Sbjct: 309 DRIL-GDLTEHI-------------------------ERLFKDADSPERKSFYQGFMVQR 342 Query: 405 PCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNL--KLAGQ-RAKIAEKILK 461 C SC GTR EA V + + ++ ++I ++ + +LAG+ A+++ ++L Sbjct: 343 QCGSCGGTRHAAEALAVRLAGRNIAEVNGLAISRLRDWVGEVRAELAGKFLAELSAELLD 402 Query: 462 EIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQ 521 ++ R++FL+ VGL+YL+L RSA TLS GE QR+RLA Q+G+GLVGV+YVLDEPSIGLH Sbjct: 403 QVDARVEFLLEVGLHYLSLDRSAPTLSAGEGQRLRLARQLGSGLVGVVYVLDEPSIGLHA 462 Query: 522 RDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIM 581 RDN RL+G L L + GNTV+VVEHD + + AAD+++D+GPGAG GG VVA GP ++ Sbjct: 463 RDNGRLIGMLRRLAEAGNTVLVVEHDRETMEAADYLVDMGPGAGTRGGLVVAAGPTAEVI 522 Query: 582 AVPESLTGQYMSGKRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGV 641 A S T Y+ +R + P+ ++ L+LTGAR NNL+ V LT+P+G+ TC+TGV Sbjct: 523 AHRTSATSAYLRNERTVVSPRPERRRPDDRRLELTGARLNNLRGVDLTIPIGVLTCVTGV 582 Query: 642 SGSGKSTLINDTLFPIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNP 701 SGSGKS+LI TL P + P+ ++G EH +V + Q IG + RS P Sbjct: 583 SGSGKSSLITRTLQPAVDTAVRWRRTP-VGPFDRLRGAEHVRRVTTVTQDSIGGSSRSTP 641 Query: 702 ATYTGVFTPVRELFAGVPESRARGYTPGRFSFNVR-GGRCEACQGDGVIKVEMHFLPDIY 760 ATY GVF +R+LFA E+ R Y+ FSFN GGRC+ C G GV++VEM FL D+ Sbjct: 642 ATYLGVFDEIRKLFARTDEAVRRRYSTAMFSFNTEAGGRCDRCAGKGVVRVEMLFLADVS 701 Query: 761 VPCDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTY 820 V C C G RY+ LEI ++G+TI E L + + EA E + VPA+A L+TL VGL Y Sbjct: 702 VRCPSCDGLRYSARVLEITHRGRTIAETLALEVGEAIELYADVPAIAYPLRTLSQVGLGY 761 Query: 821 IRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRD 880 +RLGQ TLSGGEAQR+KL+REL +R G TLY++DEPTTGLHF+D+Q LLDVLH L D Sbjct: 762 LRLGQDTGTLSGGEAQRLKLSRELLRRDEGGTLYLIDEPTTGLHFSDVQVLLDVLHDLVD 821 Query: 881 QGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLKPML 940 +GNT+VVIEH+++ +DWIVDLGP GG GG ++ +G PE +A S A +L L Sbjct: 822 RGNTVVVIEHSVEFAAASDWIVDLGPGGGEDGGRLVAAGPPELLATHPDSAIAPYLARQL 881 Score = 153 bits (387), Expect = 3e-35, Method: Composition-based stats. Identities = 73/284 (25%), Positives = 121/284 (42%), Gaps = 45/284 (15%) Query: 353 KENIEFKYMNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFI----------- 401 + + G + + GV + + + T+ AVR + + Sbjct: 623 RRVTTVTQDSIGGSSRSTPATYLGVFDEIRKLFARTD-EAVRRRYSTAMFSFNTEAGGRC 681 Query: 402 ------------------SNRPCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFF 443 + C SC+G R + + + +G A+E + Sbjct: 682 DRCAGKGVVRVEMLFLADVSVRCPSCDGLRYSARVLEITHRGRTIAETLALEVGEAIELY 741 Query: 444 NNLKLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGA 503 ++ I L+ L VGL YL L + TLSGGEAQR++L+ ++ Sbjct: 742 ADVP--------------AIAYPLRTLSQVGLGYLRLGQDTGTLSGGEAQRLKLSRELLR 787 Query: 504 GLVG-VMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGP 562 G +Y++DEP+ GLH D + LL L L D GNTV+V+EH + A+D ++D+GP Sbjct: 788 RDEGGTLYLIDEPTTGLHFSDVQVLLDVLHDLVDRGNTVVVIEHSVEFAAASDWIVDLGP 847 Query: 563 GAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEVPKKRVP 606 G G GG +VA GP E + P+S Y++ + + ++ P Sbjct: 848 GGGEDGGRLVAAGPPELLATHPDSAIAPYLARQLALTAARRPNP 891 Score = 89.2 bits (220), Expect = 8e-16, Method: Composition-based stats. Identities = 44/118 (37%), Positives = 59/118 (50%), Gaps = 7/118 (5%) Query: 607 ANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGAT 666 NPE+++ L G R +NL+ L+LP G T +TGVSGSGKS+L DT++ RQ + Sbjct: 2 RNPERIV-LRGVRQHNLRIGELSLPRGGLTVVTGVSGSGKSSLAFDTIYAEGYRQYLDSL 60 Query: 667 IAEPAPYRDIQGLEHFDKV------IDIDQSPIGRTPRSNPATYTGVFTPVRELFAGV 718 A D V + I+Q I R PRSN T T + +R LFA Sbjct: 61 SAHVRRRLPKVSKPTVDWVSGLSPTVAIEQRTISRNPRSNVGTITEISDRLRLLFART 118 >UniRef50_Q0W0L7 Excinuclease ABC, ATPase subunit n=3 Tax=cellular organisms RepID=Q0W0L7_UNCMA Length = 843 Score = 805 bits (2080), Expect = 0.0, Method: Composition-based stats. Identities = 336/709 (47%), Positives = 456/709 (64%), Gaps = 9/709 (1%) Query: 238 DDPKAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQN 297 D + F CP CG + EL FSFN P GAC TC GL V + R+I + Sbjct: 135 DWQDESDESADETFPCPGCGRELPELSMAHFSFNKPEGACTTCTGLSVVRQAIVSRLI-D 193 Query: 298 PELSLAGGAIRGW-DRRNFYYFQMLKSLADHYKF--DVEAPWGSLSANVHKVVLYGSGKE 354 S+ A+ GW D N Q+L++ +Y F D+ P + ++LYG+ Sbjct: 194 ENRSIPENAVYGWTDFHNNRNGQILQAAGRYYGFTFDITKPVKDYTPVERDLLLYGTDSP 253 Query: 355 NIEFKYMNDRGDTSIRRHPFEGVLHNMERRYKETESSA-VREELAKFISNRPCASCEGTR 413 + + + ++ + FEGV+ + RRY E S A RE+L + + C CEGTR Sbjct: 254 QFKRHFPGIKPPSTSAKGRFEGVITTLMRRYDEHASDAAYREKLDDLFTTQTCTDCEGTR 313 Query: 414 LRREARHVYVENTPLPAISDMSIGHAMEFFNNL--KLAGQRAKIAEKILKEIGDRLKFLV 471 LR E+R V V + A+S +S+ + +L +L Q A IL ++ +R++ L+ Sbjct: 314 LRPESRAVTVAGLSIDAVSRLSLKDLDAWLQSLPQQLTDQEMLFARPILDDLQERIRRLI 373 Query: 472 NVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTL 531 VG+ YLTL RS T+S GEA+R+RLA+ +G+GL G++YVLDEP+IGLHQRD RL+ L Sbjct: 374 EVGVGYLTLERSTPTISAGEARRLRLAALLGSGLTGMLYVLDEPTIGLHQRDTGRLISVL 433 Query: 532 IHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQY 591 LRDLGNTV+VVEHD + I+AAD++IDIGPGAG +GG++VA G + SLTG + Sbjct: 434 RRLRDLGNTVLVVEHDLELIKAADYLIDIGPGAGKYGGQIVAAGTPAEVAQTEGSLTGAF 493 Query: 592 MSGKRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLIN 651 ++G + VP+ R + L + GAR NL ++T+ +P+GL +TGVSGSGKS+LI Sbjct: 494 IAGTMTVPVPETRRKR-GQSALMIKGARHFNLNNLTIEIPLGLLVAVTGVSGSGKSSLIF 552 Query: 652 DTLFPIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPV 711 L A ++LNG T +P + I G E+ DKVI IDQS I R PRSN ATY+ FTP+ Sbjct: 553 KILATAAHQRLNG-TSEKPGDHDSITGWEYIDKVITIDQSQILRIPRSNAATYSDAFTPI 611 Query: 712 RELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRY 771 RE FA P+ + T +FSFNV GGRCE CQG G + V+MHFLP++ V C C+G+R+ Sbjct: 612 REAFAATPDGKKNKATARQFSFNVPGGRCERCQGAGTLAVKMHFLPEVEVRCPACRGRRF 671 Query: 772 NRETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLS 831 RETL IKY+G I +VL+MT+EEA E F VPA+A +LQ + DVGL Y++LGQ ATTLS Sbjct: 672 KRETLAIKYRGYDISQVLEMTVEEALELFSDVPAIASRLQFMSDVGLGYLKLGQPATTLS 731 Query: 832 GGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHN 891 GGEAQR+KLAREL + TG+TLY+LDEPTTGLH AD +LL VL +L D GN+++VIEHN Sbjct: 732 GGEAQRLKLARELGRSSTGRTLYLLDEPTTGLHPADTARLLQVLQRLVDAGNSLIVIEHN 791 Query: 892 LDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLKPML 940 LD++K ADW++DLGPEGG+ GG ++ GTP VAE E S+T ++LK L Sbjct: 792 LDLVKAADWVIDLGPEGGAEGGRLVAEGTPGEVAEVEESYTGQYLKTRL 840 Score = 205 bits (521), Expect = 9e-51, Method: Composition-based stats. Identities = 78/196 (39%), Positives = 113/196 (57%), Gaps = 15/196 (7%) Query: 403 NRPCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKE 462 C +C G R +RE + + + +M++ A+E F+++ Sbjct: 660 EVRCPACRGRRFKRETLAIKYRGYDISQVLEMTVEEALELFSDVP--------------A 705 Query: 463 IGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGV-MYVLDEPSIGLHQ 521 I RL+F+ +VGL YL L + A TLSGGEAQR++LA ++G G +Y+LDEP+ GLH Sbjct: 706 IASRLQFMSDVGLGYLKLGQPATTLSGGEAQRLKLARELGRSSTGRTLYLLDEPTTGLHP 765 Query: 522 RDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIM 581 D RLL L L D GN++IV+EH+ D ++AAD VID+GP G GG +VAEG + Sbjct: 766 ADTARLLQVLQRLVDAGNSLIVIEHNLDLVKAADWVIDLGPEGGAEGGRLVAEGTPGEVA 825 Query: 582 AVPESLTGQYMSGKRK 597 V ES TGQY+ + + Sbjct: 826 EVEESYTGQYLKTRLQ 841 Score = 178 bits (453), Expect = 7e-43, Method: Composition-based stats. Identities = 67/127 (52%), Positives = 91/127 (71%), Gaps = 8/127 (6%) Query: 3 KIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLS--AY 60 IE+R AR HNLKN+NL IP++K++V+TGLSGSGKS++A D L EGQR+Y+ESL + Sbjct: 4 TIEIRNARLHNLKNVNLDIPKNKIVVITGLSGSGKSTIAMDILLKEGQRQYMESLGMITF 63 Query: 61 ARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRC 120 R +P VD I GLSP IS++Q +H+PRSTVGT+T+I YLR+L+AR+G C Sbjct: 64 GRT------RPPVDSIVGLSPTISVDQYLLNHSPRSTVGTVTDIFTYLRVLYARIGHRNC 117 Query: 121 PDHDVPL 127 P + + Sbjct: 118 PHCGMEV 124 Score = 100 bits (250), Expect = 2e-19, Method: Composition-based stats. Identities = 46/180 (25%), Positives = 67/180 (37%), Gaps = 42/180 (23%) Query: 613 LKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGAT--IAEP 670 +++ AR +NLK+V L +P ITG+SGSGKST+ D L QRQ + I Sbjct: 5 IEIRNARLHNLKNVNLDIPKNKIVVITGLSGSGKSTIAMDILLKEGQRQYMESLGMITFG 64 Query: 671 APYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPE---------- 720 + + I +DQ + +PRS T T +FT +R L+A + Sbjct: 65 RTRPPVDSIVGLSPTISVDQYLLNHSPRSTVGTVTDIFTYLRVLYARIGHRNCPHCGMEV 124 Query: 721 ------------------------------SRARGYTPGRFSFNVRGGRCEACQGDGVIK 750 + FSFN G C C G V++ Sbjct: 125 PPMGFESQAYDWQDESDESADETFPCPGCGRELPELSMAHFSFNKPEGACTTCTGLSVVR 184 Score = 92.3 bits (228), Expect = 9e-17, Method: Composition-based stats. Identities = 40/114 (35%), Positives = 54/114 (47%), Gaps = 15/114 (13%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 63 + ++GAR NL N+ + IP L+ VTG+SGSGKSSL F L +R Sbjct: 514 LMIKGARHFNLNNLTIEIPLGLLVAVTGVSGSGKSSLIFKILATAAHQRLN--------- 564 Query: 64 FLSLMEKP-DVDHIEG---LSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFA 113 EKP D D I G + I+I+Q PRS T ++ +R FA Sbjct: 565 --GTSEKPGDHDSITGWEYIDKVITIDQSQILRIPRSNAATYSDAFTPIREAFA 616 >UniRef50_B6W740 Putative uncharacterized protein n=1 Tax=Anaerococcus hydrogenalis DSM 7454 RepID=B6W740_9FIRM Length = 610 Score = 785 bits (2027), Expect = 0.0, Method: Composition-based stats. Identities = 305/604 (50%), Positives = 423/604 (70%), Gaps = 6/604 (0%) Query: 2 DKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYA 61 +KI ++GART+NLKN++L +PRDK+IV TGLSGSGKS+LAFDT+YAEGQRRYVESLS+YA Sbjct: 4 NKIVIKGARTNNLKNVDLTLPRDKMIVFTGLSGSGKSTLAFDTIYAEGQRRYVESLSSYA 63 Query: 62 RQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCP 121 RQFL ++K DVD IEGLSP+ISI+QK+T+ NPRSTV T+TEI+DY RLLFAR+G+ CP Sbjct: 64 RQFLGNLDKADVDAIEGLSPSISIDQKTTNRNPRSTVATVTEIYDYYRLLFARIGDAYCP 123 Query: 122 DHDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARIDG 181 + AQ++ QMVD +L R+ +LAP+++ +KG+H K L+N+ GY+R IDG Sbjct: 124 VCGKKIEAQSIDQMVDRILKLENKTRIQILAPVVRAQKGQHKKKLQNIQKMGYVRVMIDG 183 Query: 182 EVCDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVADMDDPK 241 E D+ + +L KKH I ++VDR +++ + RLA+S ETALEL+ G + +D Sbjct: 184 ERYDIEEEIELSKTKKHDISIIVDRIVIKEGINSRLADSLETALELTDGLVQINVID--- 240 Query: 242 AEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPELS 301 E+ + S+ ACP S+ E+ P +FSFN P G CP C+GLG DPD VI + LS Sbjct: 241 GEDFILSSKLACPDGHVSLPEITPNMFSFNAPQGMCPECNGLGFHLQIDPDLVIPDKNLS 300 Query: 302 LAGGAIRGW--DRRNFYYFQMLKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKENIEFK 359 + GAI + + YY +M+K++A ++KF ++ P + + +LYG+ KE + F Sbjct: 301 INEGAIDPYATSGKGTYYNEMIKAIAKNHKFSLDEPIKNAPKKMIDEILYGTKKE-VSFT 359 Query: 360 YMNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGTRLRREAR 419 + + FEG + N+ RY+ T S A ++ + F+S C SC G RL+ E Sbjct: 360 FDSHFSGRKNYTGHFEGAIKNLSDRYERTNSDAQKKRMRGFMSEEECKSCHGHRLKDEIL 419 Query: 420 HVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLT 479 + V+ + I++MS+ +EFF+NLKL+ + KIAE I+KEI R+KFL +VGL YL+ Sbjct: 420 AIKVDGKSISEIANMSVDKTIEFFDNLKLSPMKEKIAELIIKEIKARVKFLQDVGLGYLS 479 Query: 480 LSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGN 539 LSRSA TLSGGE+QRIRLA+QIG+GLVGV YVLDEPSIGLHQRDN++L+ +L +L D+GN Sbjct: 480 LSRSASTLSGGESQRIRLATQIGSGLVGVCYVLDEPSIGLHQRDNDKLIKSLRNLTDIGN 539 Query: 540 TVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIE 599 T+I+VEHDED ++AAD+++DIGP AGVHGGE+VA+G L I +S+TG Y+SGK K + Sbjct: 540 TLIIVEHDEDTMKAADYLVDIGPKAGVHGGEIVAKGSLSDIKNCKKSITGAYLSGKEKFQ 599 Query: 600 VPKK 603 KK Sbjct: 600 YQKK 603 Score = 185 bits (470), Expect = 7e-45, Method: Composition-based stats. Identities = 74/197 (37%), Positives = 115/197 (58%), Gaps = 17/197 (8%) Query: 754 HFLPDIYVPCDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDA----------- 802 F+ + C C G R E L IK GK+I E+ +M++++ EFFD Sbjct: 399 GFMSEEE--CKSCHGHRLKDEILAIKVDGKSISEIANMSVDKTIEFFDNLKLSPMKEKIA 456 Query: 803 ---VPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEP 859 + + +++ L DVGL Y+ L +SA+TLSGGE+QR++LA ++ G Y+LDEP Sbjct: 457 ELIIKEIKARVKFLQDVGLGYLSLSRSASTLSGGESQRIRLATQIGSGLVG-VCYVLDEP 515 Query: 860 TTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSG 919 + GLH D +L+ L L D GNT++++EH+ D +K AD++VD+GP+ G GGEI+ G Sbjct: 516 SIGLHQRDNDKLIKSLRNLTDIGNTLIIVEHDEDTMKAADYLVDIGPKAGVHGGEIVAKG 575 Query: 920 TPETVAECEASHTARFL 936 + + C+ S T +L Sbjct: 576 SLSDIKNCKKSITGAYL 592 Score = 108 bits (269), Expect = 2e-21, Method: Composition-based stats. Identities = 51/147 (34%), Positives = 71/147 (48%), Gaps = 16/147 (10%) Query: 609 PEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIA 668 E + + GAR NNLK+V LTLP TG+SGSGKSTL DT++ QR+ + + Sbjct: 2 SENKIVIKGARTNNLKNVDLTLPRDKMIVFTGLSGSGKSTLAFDTIYAEGQRRYVESLSS 61 Query: 669 EPAPY------RDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESR 722 + D+ +E I IDQ R PRS AT T ++ R LFA + ++ Sbjct: 62 YARQFLGNLDKADVDAIEGLSPSISIDQKTTNRNPRSTVATVTEIYDYYRLLFARIGDA- 120 Query: 723 ARGYTPGRFSFNVRGGRCEACQGDGVI 749 Y P V G + EA D ++ Sbjct: 121 ---YCP------VCGKKIEAQSIDQMV 138 >UniRef50_B2T6A1 Excinuclease ABC, A subunit n=34 Tax=Bacteria RepID=B2T6A1_BURPP Length = 950 Score = 762 bits (1969), Expect = 0.0, Method: Composition-based stats. Identities = 275/756 (36%), Positives = 391/756 (51%), Gaps = 81/756 (10%) Query: 261 RELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPELSLAGGAIRGWDRRNFYYFQM 320 L FS N GACPTC GLG ++ + L++ AI W ++ Q Sbjct: 198 PMLFAEDFSPNTVQGACPTCHGLGRVYEVTEKSMVPDDSLTIRERAIAAWPP--AWHGQN 255 Query: 321 LKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKENIEF---------KYMNDRGDTSIRR 371 L+ + +DV+ PW L +L+ + + + R D + Sbjct: 256 LRDILVTLGYDVDKPWRDLPKKDRDWILFTDEQPTVPVYAGLTPKETRAALRRKDEPSYQ 315 Query: 372 HPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGTRLRREARHVYVENTPLPAI 431 F G + + T+S+ +++ +++F+ C +C G RL++EA V + Sbjct: 316 GTFTGARRYVLHTFANTQSALMKKRVSRFMIGSVCPTCHGKRLKKEALSVKFAGLDIGEF 375 Query: 432 SDMSIGHAMEFFNNL--------------------------------------------- 446 + + + E + Sbjct: 376 AQLPLARLAEMLAPIARGEWPEPDVGHSGKDPGKGSVLSKNAMRDAVDKRVAAGGSAHKA 435 Query: 447 --------KLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLA 498 L+ ++ A++I E+ +RL LV++GL YL L RS TLS GE QR+RLA Sbjct: 436 APDVRRTPNLSEEKRVAAQRIAAELLERLTTLVDLGLGYLALERSTPTLSSGELQRLRLA 495 Query: 499 SQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVI 558 +Q+ + L GV+YVLDEPS GLH D E L L L+ GN++ VVEHD +R AD ++ Sbjct: 496 TQLSSQLFGVVYVLDEPSAGLHPADGEALFSALQSLKAAGNSLFVVEHDLQMMRRADWLV 555 Query: 559 DIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEVPKKRVPANPEKVLKLTGA 618 D+GP AG GG VV GP + V S T +++ P R P L+L G Sbjct: 556 DVGPAAGEAGGHVVYSGPPAGLAKVEASHTRRHLFAP---PAPVARATREPAGWLRLAGI 612 Query: 619 RGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNG-------------- 664 NNL + P+G T +TGVSGSGKS+L++ L + L Sbjct: 613 TRNNLHGLDAAFPLGCLTAVTGVSGSGKSSLVSQALPELVASHLGRVFENPDDDEQDPLL 672 Query: 665 ATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESRAR 724 AT + P R +G++ +++ +DQ PIGRTPRSN ATYTG+F VR+LFA P +R R Sbjct: 673 ATASAPTSGRIAEGMDALRRLVRVDQKPIGRTPRSNLATYTGLFDHVRKLFADTPLARKR 732 Query: 725 GYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKYKGKT 784 Y GRFSFNV GRC C+G+G + VE+ FLP +Y PC C G RYN +TLE+ ++ K Sbjct: 733 RYGAGRFSFNVAQGRCPTCEGEGFVSVELLFLPSVYAPCSTCHGTRYNTQTLEVTWRDKN 792 Query: 785 IHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLAREL 844 I EVL +T++ A +FF ++ R L+ L D+GL Y+RLGQ AT LSGGEAQR+KLA EL Sbjct: 793 IAEVLGLTVDAACDFFADEASVMRALKVLRDIGLGYLRLGQPATELSGGEAQRIKLATEL 852 Query: 845 SKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADWIVDL 904 + G TLYILDEPTTGLH AD+ +L+ L L D GNT+VV+EH++ V +DW+VD+ Sbjct: 853 QRAQRGDTLYILDEPTTGLHPADVDRLMVQLQGLVDAGNTVVVVEHDMRVASQSDWVVDV 912 Query: 905 GPEGGSGGGEILVSGTPETVAECEASHTARFLKPML 940 GP G GG+I+ SGTP + + S TA +L+ L Sbjct: 913 GPGAGDAGGKIVASGTPAEILRVKESRTAEYLRQHL 948 Score = 183 bits (465), Expect = 3e-44, Method: Composition-based stats. Identities = 62/114 (54%), Positives = 89/114 (78%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 63 + VRGAR HNLKNI++ IPRD L+V TG+SGSGKSSLAF TLYAE QRRY ES++ YAR+ Sbjct: 79 VRVRGAREHNLKNIDVQIPRDALVVFTGVSGSGKSSLAFGTLYAEAQRRYFESVAPYARR 138 Query: 64 FLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGE 117 + + P+VD IEGL PA++++Q+ + + RS+VG++T + +R+L++R G+ Sbjct: 139 LIEQVGVPEVDAIEGLPPAVALQQQRGTPSARSSVGSVTTLSSLVRMLYSRTGD 192 Score = 108 bits (269), Expect = 1e-21, Method: Composition-based stats. Identities = 47/199 (23%), Positives = 80/199 (40%), Gaps = 12/199 (6%) Query: 599 EVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIA 658 P PA +++ GAR +NLK++ + +P TGVSGSGKS+L TL+ A Sbjct: 66 STPPSDAPA-FTGFVRVRGAREHNLKNIDVQIPRDALVVFTGVSGSGKSSLAFGTLYAEA 124 Query: 659 QRQL------NGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVR 712 QR+ + E ++ +E + + Q + RS+ + T + + VR Sbjct: 125 QRRYFESVAPYARRLIEQVGVPEVDAIEGLPPAVALQQQRGTPSARSSVGSVTTLSSLVR 184 Query: 713 ELFAGVPE--SRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKR 770 L++ + + FS N G C C G G + VP D + Sbjct: 185 MLYSRTGDYPPKQPMLFAEDFSPNTVQGACPTCHGLGRVY---EVTEKSMVPDDSLTIRE 241 Query: 771 YNRETLEIKYKGKTIHEVL 789 + G+ + ++L Sbjct: 242 RAIAAWPPAWHGQNLRDIL 260 Score = 83.1 bits (204), Expect = 5e-14, Method: Composition-based stats. Identities = 39/160 (24%), Positives = 57/160 (35%), Gaps = 49/160 (30%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 63 + + G +NL ++ P L VTG+SGSGKSSL ++L Sbjct: 607 LRLAGITRNNLHGLDAAFPLGCLTAVTGVSGSGKSSLV------------SQALPELVAS 654 Query: 64 FLSL-MEKPDVDHIEGLSPA-------------------ISIEQKSTSHNPRSTVGTITE 103 L E PD D + L + ++QK PRS + T T Sbjct: 655 HLGRVFENPDDDEQDPLLATASAPTSGRIAEGMDALRRLVRVDQKPIGRTPRSNLATYTG 714 Query: 104 IHDYLRLLFA-----------------RVGEPRCPDHDVP 126 + D++R LFA V + RCP + Sbjct: 715 LFDHVRKLFADTPLARKRRYGAGRFSFNVAQGRCPTCEGE 754 >UniRef50_B6A038 Excinuclease ABC, A subunit n=8 Tax=Bacteria RepID=B6A038_RHILW Length = 861 Score = 758 bits (1958), Expect = 0.0, Method: Composition-based stats. Identities = 280/732 (38%), Positives = 413/732 (56%), Gaps = 43/732 (5%) Query: 244 ELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPELSLA 303 +L+S P LE FS N P GACP C GLG ++ +P L++ Sbjct: 125 RMLYSRTGTYPAGQ---PHLEAEAFSPNTPEGACPQCHGLGRVHEVTETSMVPDPSLTIR 181 Query: 304 GGAIRGWDRRNFYYFQMLKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKENIEF----- 358 A+ W + Q L+ + DV+ PW L + +L+ + + Sbjct: 182 ERAVAAWPL--AWGGQNLRDILITLGIDVDKPWRELPEKTRQWILFTDEQPVVPVYPGLS 239 Query: 359 ----KYMNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGTRL 414 + R D F ++ + T+S+ +++ A+++ + C CEG RL Sbjct: 240 HDQVQRAIKRKDEPSYMGTFSSARRHVTHSFATTQSAMMKKRAARYMISSACPLCEGKRL 299 Query: 415 RREARHVYVENTPLPAISDMSIGHAMEFFNN------------LKLAGQRAKIAEKILKE 462 R+E+ V E I+ + + + F+ K ++A + ++I + Sbjct: 300 RKESLSVTFEGLDYAEINRLPMAAFKDIFSPYANVDAGKLKTMRKEHPEKAMVVQRIAAD 359 Query: 463 IGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQR 522 + RL L+++GL YLTL RS TLS GE QR+RLA+Q+ + L GV+YV+DEPS GLH Sbjct: 360 LCRRLSVLLDLGLGYLTLERSTPTLSPGELQRLRLATQVVSNLFGVVYVMDEPSAGLHPA 419 Query: 523 DNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMA 582 D E LL L L+ +GN++ VVEH+ D +R AD V+D+GP AG GGEV+ GP E + Sbjct: 420 DTEALLRALDGLKSVGNSLFVVEHELDVVRHADWVVDVGPAAGELGGEVLYSGPPEGLRK 479 Query: 583 VPESLTGQYMSGKRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVS 642 V S T +++ + +R P + L+L+G NNL+DV P+G+ T +TG+S Sbjct: 480 VERSETARHLFAGAQKFSATRRAP---DGWLRLSGITRNNLQDVDCAFPLGVMTTVTGIS 536 Query: 643 GSGKSTLINDTLFPIAQRQLNGATIAE--------------PAPYRDIQGLEHFDKVIDI 688 GSGKS+L++ L + L + E P R GL+ ++I++ Sbjct: 537 GSGKSSLVSQVLVELVGEALGASVRVENDAEGEALEAGPSLPMQGRIEVGLDRIRRLIEV 596 Query: 689 DQSPIGRTPRSNPATYTGVFTPVRELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGV 748 DQ PIGRTPRSN ATYTG+F VR LFA E++ R Y GRFSFNV GRC C+G+G Sbjct: 597 DQKPIGRTPRSNLATYTGLFDHVRSLFAATAEAKKRRYDAGRFSFNVAKGRCPRCEGEGF 656 Query: 749 IKVEMHFLPDIYVPCDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALAR 808 + VE+ FLP +Y PC C G RYN ETL+I+Y+GKTI +VL +T+ EA +FFD P++ + Sbjct: 657 VMVELLFLPSVYAPCPTCHGTRYNPETLKIRYRGKTISQVLSLTVAEAWDFFDNAPSVQK 716 Query: 809 KLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADI 868 L+ L +VGL+Y+RLGQ AT SGGEAQR+KLA EL + G LY+LDEPTTGLH +D+ Sbjct: 717 SLEVLTEVGLSYLRLGQPATEFSGGEAQRIKLATELQRAQKGGALYVLDEPTTGLHPSDV 776 Query: 869 QQLLDVLHKLRDQGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECE 928 ++L+ L+ L + GNT++V++H++ + +DW++D+GP G GG I+ SGTPE +A Sbjct: 777 ERLVAQLNALVENGNTVIVVDHDMTLAAASDWVIDIGPGAGDAGGRIVASGTPEHIAFAR 836 Query: 929 ASHTARFLKPML 940 S TA +LK + Sbjct: 837 NSRTAPYLKRLF 848 Score = 191 bits (486), Expect = 1e-46, Method: Composition-based stats. Identities = 67/114 (58%), Positives = 89/114 (78%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 63 + VRGAR HNLKN+++ IPRD L+V TG+SGSGKSSLAF TLYAE QRRY+ES+S YAR+ Sbjct: 20 VRVRGAREHNLKNVDVDIPRDALVVFTGVSGSGKSSLAFSTLYAEAQRRYLESVSPYARR 79 Query: 64 FLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGE 117 + M PDVD IEGL PA++++Q+ S RS+VG++T I + LR+L++R G Sbjct: 80 LFTQMSVPDVDQIEGLPPAVALQQQRGSPTTRSSVGSVTTISNLLRMLYSRTGT 133 Score = 110 bits (276), Expect = 2e-22, Method: Composition-based stats. Identities = 47/193 (24%), Positives = 77/193 (39%), Gaps = 11/193 (5%) Query: 605 VPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNG 664 PE V+++ GAR +NLK+V + +P TGVSGSGKS+L TL+ AQR+ Sbjct: 12 AAQKPEGVVRVRGAREHNLKNVDVDIPRDALVVFTGVSGSGKSSLAFSTLYAEAQRRYLE 71 Query: 665 ATIAEPAP------YRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGV 718 + D+ +E + + Q T RS+ + T + +R L++ Sbjct: 72 SVSPYARRLFTQMSVPDVDQIEGLPPAVALQQQRGSPTTRSSVGSVTTISNLLRMLYSRT 131 Query: 719 PE--SRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETL 776 + FS N G C C G G + VP + Sbjct: 132 GTYPAGQPHLEAEAFSPNTPEGACPQCHGLGRVH---EVTETSMVPDPSLTIRERAVAAW 188 Query: 777 EIKYKGKTIHEVL 789 + + G+ + ++L Sbjct: 189 PLAWGGQNLRDIL 201 Score = 89.2 bits (220), Expect = 8e-16, Method: Composition-based stats. Identities = 39/131 (29%), Positives = 59/131 (45%), Gaps = 22/131 (16%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYAR- 62 + + G +NL++++ P + VTG+SGSGKSSL L E+L A R Sbjct: 507 LRLSGITRNNLQDVDCAFPLGVMTTVTGISGSGKSSLVSQVLVELVG----EALGASVRV 562 Query: 63 ------------QFLSLMEKPDV--DHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYL 108 L + + +V D I L I ++QK PRS + T T + D++ Sbjct: 563 ENDAEGEALEAGPSLPMQGRIEVGLDRIRRL---IEVDQKPIGRTPRSNLATYTGLFDHV 619 Query: 109 RLLFARVGEPR 119 R LFA E + Sbjct: 620 RSLFAATAEAK 630 >UniRef50_Q9RCZ2 Putative excinuclease ABC subunit A n=3 Tax=Streptomyces RepID=Q9RCZ2_STRCO Length = 781 Score = 752 bits (1942), Expect = 0.0, Method: Composition-based stats. Identities = 283/698 (40%), Positives = 402/698 (57%), Gaps = 37/698 (5%) Query: 244 ELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPELSLA 303 +LFS P L+ FS N AGACP C GLG + ++ +P LS+ Sbjct: 114 RMLFSRAGTYPP---GAERLDSDAFSPNTAAGACPECHGLGRVHRTTEELLVPDPSLSIR 170 Query: 304 GGAIRGWDRRNFYYFQMLKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKENIEFKYMND 363 GAI W + + L+ + D +DV+ PW L A + +L+ + + + + Sbjct: 171 DGAIAAW--PGAWQGKNLRDVLDALGYDVDRPWRELPAEAREWILFTDEQPVVTVHPVRE 228 Query: 364 RGD-TSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGTRLRREARHVY 422 G + + + + + +++S+ +R + +F+++ PC C G RLR EA V Sbjct: 229 AGRIQRPYQGTYMSARRYVLKTFADSKSATLRAKAERFLNSAPCPVCGGGRLRAEALAVT 288 Query: 423 VENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTLSR 482 V + ++ + + + A+ + +++ R+ +V +GL YL+L R Sbjct: 289 VGGRTVAELAALPLAELPRLL------PTEGEAAKVLAEDLISRIAPVVELGLGYLSLDR 342 Query: 483 SAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVI 542 TLS GE QR+RLA+Q+ +GL GV+YVLDEPS GLH D E LL L L+ GN+V Sbjct: 343 PTPTLSAGELQRLRLATQLRSGLFGVVYVLDEPSAGLHPADTEALLTVLERLKAAGNSVF 402 Query: 543 VVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEVPK 602 VVEH +R AD ++D+GP AG HGG V+ GP++ + V ES T +++ + V + Sbjct: 403 VVEHHLGVMRGADWIVDVGPLAGEHGGRVLYSGPVDGLARVAESATARHLFDRSPAPVRE 462 Query: 603 KRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQL 662 R P + + +NL+ VT+ +P+G+ T +TGVSGSGKSTL+ + Sbjct: 463 VRTPRGA---VTIGPVTRHNLRGVTVRVPLGVLTAVTGVSGSGKSTLVGEI--------- 510 Query: 663 NGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESR 722 + L D+++ +DQ PIGRTPRSN ATYTG+F VR++FA +R Sbjct: 511 -------------TEDLPGVDRLVSVDQRPIGRTPRSNLATYTGLFDVVRKVFAATDRAR 557 Query: 723 ARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKYKG 782 RG+ GRFSFNV GGRCE CQG+G + VE+ FLP Y PC C G RYN ETLE+ Y+G Sbjct: 558 ERGFGVGRFSFNVPGGRCETCQGEGFVSVELLFLPSTYAPCPDCGGARYNPETLEVAYRG 617 Query: 783 KTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLAR 842 + I EVLD+T+E A +FF PA+AR L L+DVGL Y+RLGQ AT LSGGEAQR+KLA Sbjct: 618 RNIAEVLDLTVEGAAQFFTDTPAVARSLAALLDVGLGYLRLGQPATELSGGEAQRIKLAS 677 Query: 843 ELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADWIV 902 EL + G TLY+LDEPTTGLH AD++ L+ LH L D G+T+VV+EH++ V+ AD ++ Sbjct: 678 ELQRGRRGHTLYLLDEPTTGLHPADVEVLMRQLHGLVDAGHTVVVVEHDMSVVAGADHVI 737 Query: 903 DLGPEGGSGGGEILVSGTPETVAECEASHTARFLKPML 940 DLGP GG GG I+ GTP VA S TA +L L Sbjct: 738 DLGPGGGDAGGRIVAEGTPARVAGAAGSATAPYLARAL 775 Score = 175 bits (444), Expect = 8e-42, Method: Composition-based stats. Identities = 59/115 (51%), Positives = 82/115 (71%) Query: 3 KIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYAR 62 + VR AR HNLK +++ +PRD L V TG+SGSGKSSLAF T+YAE QRRY ES++ YAR Sbjct: 8 YVRVRDAREHNLKGVDVDVPRDVLAVFTGVSGSGKSSLAFGTVYAEAQRRYFESVAPYAR 67 Query: 63 QFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGE 117 + + + P V I GL PA+S++Q+ + RS+VGT+T + + LR+LF+R G Sbjct: 68 RLIHQIGAPKVGGITGLPPAVSLQQRRATPTSRSSVGTVTNLSNSLRMLFSRAGT 122 Score = 105 bits (263), Expect = 8e-21, Method: Composition-based stats. Identities = 53/207 (25%), Positives = 84/207 (40%), Gaps = 11/207 (5%) Query: 610 EKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQL------N 663 + +++ AR +NLK V + +P + TGVSGSGKS+L T++ AQR+ Sbjct: 6 DPYVRVRDAREHNLKGVDVDVPRDVLAVFTGVSGSGKSSLAFGTVYAEAQRRYFESVAPY 65 Query: 664 GATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELF--AGVPES 721 + + G+ + + Q T RS+ T T + +R LF AG Sbjct: 66 ARRLIHQIGAPKVGGITGLPPAVSLQQRRATPTSRSSVGTVTNLSNSLRMLFSRAGTYPP 125 Query: 722 RARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKYK 781 A FS N G C C G G + ++ VP + ++ Sbjct: 126 GAERLDSDAFSPNTAAGACPECHGLGRVH---RTTEELLVPDPSLSIRDGAIAAWPGAWQ 182 Query: 782 GKTIHEVLDMTIEEAREFFDAVPALAR 808 GK + +VLD + + +PA AR Sbjct: 183 GKNLRDVLDALGYDVDRPWRELPAEAR 209 Score = 78.8 bits (193), Expect = 9e-13, Method: Composition-based stats. Identities = 30/113 (26%), Positives = 47/113 (41%), Gaps = 28/113 (24%) Query: 12 HNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQFLSLMEKP 71 HNL+ + + +P L VTG+SGSGKS+L + + P Sbjct: 478 HNLRGVTVRVPLGVLTAVTGVSGSGKSTLVGEI----------------------TEDLP 515 Query: 72 DVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCPDHD 124 VD + +S++Q+ PRS + T T + D +R +FA R Sbjct: 516 GVDRL------VSVDQRPIGRTPRSNLATYTGLFDVVRKVFAATDRARERGFG 562 >UniRef50_Q18CU1 Putative DNA repair protein n=6 Tax=Clostridium difficile RepID=Q18CU1_CLOD6 Length = 1142 Score = 750 bits (1936), Expect = 0.0, Method: Composition-based stats. Identities = 275/696 (39%), Positives = 421/696 (60%), Gaps = 15/696 (2%) Query: 248 SANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPELSLAGGA- 306 + CP C ++ F+ N+ GAC C+GLG +P ++++P +S+ GA Sbjct: 453 NTKNYCPHCQTIFSKINTSTFNANSHTGACHDCNGLGFTYQVNPQLIVKDPTISILDGAT 512 Query: 307 -----IRGWDRRNFYYFQMLKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKENIEFKYM 361 +RG + L ++A D++ PW L + +LYG+ + EF + Sbjct: 513 YYFGKLRGKKPNGNWMVGELYAIAKDKNIDLDIPWNELPRDFIDAILYGTDDKIYEFSFE 572 Query: 362 NDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGTRLRREARHV 421 + ++ IRR P G +++++R ++E+ S L ++++ PC +C G L EAR Sbjct: 573 SKGRESKIRR-PASGAINHIQRLFRESSSE--NNTLHQYMNKIPCNTCGGELLCIEARFT 629 Query: 422 YVENTPLPAISDMSIGHAMEFFNNL--KLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLT 479 ++ P ++ M+I + L +L + IL E+ R+ +L+ VGL+Y++ Sbjct: 630 TIKGYRFPELTKMTIEQLWNWLCELPNQLQKNELSLVNDILTELKIRVSYLLKVGLSYIS 689 Query: 480 LSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGN 539 R+A TLSGGE QR+RL+SQ+G+ LVG+ Y+LDEPSIGLH RD+ ++ + LRD GN Sbjct: 690 TDRTAPTLSGGELQRVRLSSQLGSELVGLTYILDEPSIGLHPRDHNLIIKMIEELRDKGN 749 Query: 540 TVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIE 599 TVIVVEHD+D I +AD++ID+GP AG GG ++AEG + I+ P S+TG+Y+S K Sbjct: 750 TVIVVEHDKDTILSADYIIDVGPSAGTKGGFIIAEGTTQEIIKNPNSITGKYLSTYNKTG 809 Query: 600 VPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQ 659 K +P+ K L L G NNLK++ + +P+ ITGVSGSGKS+L+ +L P + Sbjct: 810 SQNKTIPS---KWLSLKGCHANNLKNIDVEIPLNCMCSITGVSGSGKSSLVFHSLLPALE 866 Query: 660 RQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVP 719 +L +I + Y + G + D I +DQ+PIG++ RS PATY +F +R LFA P Sbjct: 867 EKLKQKSIPDK-NYTEFTGFDAIDDFILMDQTPIGKSSRSTPATYINIFDEIRSLFAETP 925 Query: 720 ESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIK 779 +++ + FSFN + G+C CQG G K+ + ++ D +V C +C+GKRY +E L I+ Sbjct: 926 QAKQKLLDESYFSFNSKKGQCPNCQGLGKTKIILQYMADQWVTCSECQGKRYQKEILSIQ 985 Query: 780 YKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVK 839 YKGKTI ++LDM + EA+ FF + RKL L +VGL Y++LGQ+ LSGGE+QR+K Sbjct: 986 YKGKTIADILDMEVAEAKTFFSDCSDIYRKLSLLDEVGLGYLKLGQNTLGLSGGESQRIK 1045 Query: 840 LARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTAD 899 LA+EL + + LYILDEPTTGLHF DI+ LL KL ++ +++++IEHN +VI+ +D Sbjct: 1046 LAKELGTKTKKRMLYILDEPTTGLHFKDIENLLITFRKLVNEQHSLLIIEHNTEVIRASD 1105 Query: 900 WIVDLGPEGGSGGGEILVSGTPETVAECEASHTARF 935 WI+D+GP+ G GGEI+ SGTP+ + S T F Sbjct: 1106 WIIDIGPDSGINGGEIVASGTPDEIKINPNSITGHF 1141 Score = 193 bits (490), Expect = 3e-47, Method: Composition-based stats. Identities = 66/129 (51%), Positives = 95/129 (73%), Gaps = 1/129 (0%) Query: 3 KIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYAR 62 I ++G R +NLK++ + IP++++ V+TG+SGSGKSSLAFDT+Y EG+RRY E+LS A+ Sbjct: 325 SIYLKGGRQNNLKDVEVTIPKNQITVITGVSGSGKSSLAFDTIYEEGKRRYFENLSNGAK 384 Query: 63 QFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCPD 122 ++KP+ D ++GL+P I+IEQK S NPRSTVGT+T I DYLR+LF +G+ CP Sbjct: 385 -LSEQLQKPEFDLLQGLTPTIAIEQKKGSQNPRSTVGTLTSIWDYLRMLFVSIGKSYCPY 443 Query: 123 HDVPLAAQT 131 +PL + Sbjct: 444 CKIPLEKKN 452 Score = 181 bits (460), Expect = 1e-43, Method: Composition-based stats. Identities = 68/201 (33%), Positives = 118/201 (58%), Gaps = 17/201 (8%) Query: 395 EELAKFISNRP--CASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQR 452 + + ++++++ C+ C+G R ++E + + + I DM + A FF++ Sbjct: 956 KIILQYMADQWVTCSECQGKRYQKEILSIQYKGKTIADILDMEVAEAKTFFSD------- 1008 Query: 453 AKIAEKILKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVG-VMYV 511 +I +L L VGL YL L ++ LSGGE+QRI+LA ++G ++Y+ Sbjct: 1009 -------CSDIYRKLSLLDEVGLGYLKLGQNTLGLSGGESQRIKLAKELGTKTKKRMLYI 1061 Query: 512 LDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEV 571 LDEP+ GLH +D E LL T L + ++++++EH+ + IRA+D +IDIGP +G++GGE+ Sbjct: 1062 LDEPTTGLHFKDIENLLITFRKLVNEQHSLLIIEHNTEVIRASDWIIDIGPDSGINGGEI 1121 Query: 572 VAEGPLEAIMAVPESLTGQYM 592 VA G + I P S+TG ++ Sbjct: 1122 VASGTPDEIKINPNSITGHFI 1142 Score = 163 bits (414), Expect = 2e-38, Method: Composition-based stats. Identities = 70/192 (36%), Positives = 108/192 (56%), Gaps = 17/192 (8%) Query: 761 VPCDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAVP---------------- 804 +PC+ C G+ E KG E+ MTIE+ + +P Sbjct: 612 IPCNTCGGELLCIEARFTTIKGYRFPELTKMTIEQLWNWLCELPNQLQKNELSLVNDILT 671 Query: 805 ALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLH 864 L ++ L+ VGL+YI ++A TLSGGE QRV+L+ +L G T YILDEP+ GLH Sbjct: 672 ELKIRVSYLLKVGLSYISTDRTAPTLSGGELQRVRLSSQLGSELVGLT-YILDEPSIGLH 730 Query: 865 FADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETV 924 D ++ ++ +LRD+GNT++V+EH+ D I +AD+I+D+GP G+ GG I+ GT + + Sbjct: 731 PRDHNLIIKMIEELRDKGNTVIVVEHDKDTILSADYIIDVGPSAGTKGGFIIAEGTTQEI 790 Query: 925 AECEASHTARFL 936 + S T ++L Sbjct: 791 IKNPNSITGKYL 802 Score = 102 bits (255), Expect = 6e-20, Method: Composition-based stats. Identities = 52/172 (30%), Positives = 75/172 (43%), Gaps = 29/172 (16%) Query: 608 NPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQL----- 662 + + + L G R NNLKDV +T+P T ITGVSGSGKS+L DT++ +R+ Sbjct: 321 HNKSSIYLKGGRQNNLKDVEVTIPKNQITVITGVSGSGKSSLAFDTIYEEGKRRYFENLS 380 Query: 663 NGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPES- 721 NGA ++E + L+ I I+Q + PRS T T ++ +R LF + +S Sbjct: 381 NGAKLSEQLQKPEFDLLQGLTPTIAIEQKKGSQNPRSTVGTLTSIWDYLRMLFVSIGKSY 440 Query: 722 ------------RARGYTP-----------GRFSFNVRGGRCEACQGDGVIK 750 + Y P F+ N G C C G G Sbjct: 441 CPYCKIPLEKKNNTKNYCPHCQTIFSKINTSTFNANSHTGACHDCNGLGFTY 492 Score = 95.0 bits (235), Expect = 1e-17, Method: Composition-based stats. Identities = 48/197 (24%), Positives = 75/197 (38%), Gaps = 51/197 (25%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 63 + ++G +NLKNI++ IP + + +TG+SGSGKSSL F SL + Sbjct: 820 LSLKGCHANNLKNIDVEIPLNCMCSITGVSGSGKSSLVFH------------SLLPALEE 867 Query: 64 FLSLMEKPD--------VDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARV 115 L PD D I+ I ++Q + RST T I D +R LFA Sbjct: 868 KLKQKSIPDKNYTEFTGFDAIDDF---ILMDQTPIGKSSRSTPATYINIFDEIRSLFAET 924 Query: 116 GEPR-----------------CPDHD-----VPLAAQTVSQMVDNVLSQPEGKRLM--LL 151 + + CP+ + Q S+ +GKR +L Sbjct: 925 PQAKQKLLDESYFSFNSKKGQCPNCQGLGKTKIILQYMADQ--WVTCSECQGKRYQKEIL 982 Query: 152 APIIKERKGEHTKTLEN 168 + I+ + L+ Sbjct: 983 S--IQYKGKTIADILDM 997 >UniRef50_B4V5Y5 Excinuclease ABC subunit A n=1 Tax=Streptomyces sp. Mg1 RepID=B4V5Y5_9ACTO Length = 791 Score = 746 bits (1926), Expect = 0.0, Method: Composition-based stats. Identities = 293/702 (41%), Positives = 418/702 (59%), Gaps = 31/702 (4%) Query: 244 ELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPELSLA 303 +L+S A P L+ FS N AGACP+C G+G D ++ +P+LS+ Sbjct: 114 RMLYSRAGAYPA---GAERLDSDAFSPNTAAGACPSCHGIGRIHRTDEQLLVPDPDLSIR 170 Query: 304 GGAIRGWDRRNFYYFQMLKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKENIEFKYMND 363 GAI W + + L+ + + DV+APW L A + +L+ + + + Sbjct: 171 QGAIAAW--PGAWQGKNLRDILEALGHDVDAPWRELPARDREWILFTEEQPVVTVHPVR- 227 Query: 364 RGDTSIRRHPFEGVL----HNMERRYKETESSAVREELAKFISNRPCASCEGTRLRREAR 419 + + P++G ++ R + +++S+++R KF+++ PC CEG RLR EA Sbjct: 228 --EAERIQRPYQGTYMSAHRHVMRTFADSKSASLRARAEKFLTDSPCPVCEGRRLRPEAL 285 Query: 420 HVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLT 479 V + ++ + + + G+ A++ + +++ R+ + +GL YL+ Sbjct: 286 AVTFAGRTIAELAAVPLTELDGVLASAPPGGEAARV---LAEDLRARIAPVTELGLGYLS 342 Query: 480 LSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGN 539 L R+A +LS GE QR+RLA+Q+ +GL GV+YVLDEPS GLH D E LL L L+ GN Sbjct: 343 LDRTAPSLSAGELQRLRLATQLKSGLFGVVYVLDEPSAGLHPADTEALLTVLDRLKAAGN 402 Query: 540 TVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIE 599 TV VVEHD D +R AD ++D+GP AG HGG V+ GP + V ES T +++ +E Sbjct: 403 TVFVVEHDLDVVRHADWLVDVGPLAGEHGGRVLHSGPPAGLADVAESATARHLFAS--LE 460 Query: 600 VPKKRVP-ANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIA 658 P++ P ++L+G +NL+ VT P+G+FT +TGVSGSGKSTL+ L Sbjct: 461 SPERPRPVREARGAVRLSGVDRHNLRGVTAEFPLGVFTAVTGVSGSGKSTLVGQALAGEV 520 Query: 659 QRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGV 718 +L +++++DQ PIGRTPRSN ATYTG+F VR LF Sbjct: 521 AGRLAEPGFP-------------VRRLVEVDQRPIGRTPRSNLATYTGLFDVVRRLFTAS 567 Query: 719 PESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEI 778 E+RARG+ GRFSFNV GGRCE CQG+G + VE+ FLP Y PC QC G RYN ETL++ Sbjct: 568 DEARARGWKAGRFSFNVPGGRCETCQGEGFVSVELLFLPSTYAPCPQCGGARYNAETLQV 627 Query: 779 KYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRV 838 +Y+G +I EVL +T+E A FF VPA AR L+ L D+GL Y+RLGQ AT LSGGEAQR+ Sbjct: 628 RYEGLSIAEVLSLTVEAAAVFFAQVPAAARSLRALEDIGLGYLRLGQPATELSGGEAQRI 687 Query: 839 KLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTA 898 KLA EL + TLY+LDEPTTGLH AD++ LL LH L + G+++VV+EH++DV+ A Sbjct: 688 KLATELQRLRRDHTLYLLDEPTTGLHPADVRVLLRQLHGLVEAGHSVVVVEHDMDVVAGA 747 Query: 899 DWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLKPML 940 DW++DLGP GG+ GG ++ SGTP VA S TA +L L Sbjct: 748 DWVIDLGPGGGAEGGRVVASGTPSEVARTPGSRTAGYLARAL 789 Score = 180 bits (456), Expect = 3e-43, Method: Composition-based stats. Identities = 61/114 (53%), Positives = 85/114 (74%) Query: 3 KIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYAR 62 + VRGAR HNL+ +++ IPRD L V TG+SGSGKSSLAF TLYAE QRRY ES++ YAR Sbjct: 8 YVRVRGAREHNLRGVDVDIPRDALTVFTGVSGSGKSSLAFGTLYAEAQRRYFESVAPYAR 67 Query: 63 QFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVG 116 + + + P VD + GL PA+S+EQ+ ++ RS+VGT+T + + LR+L++R G Sbjct: 68 RLIHQIGAPKVDSVTGLPPAVSLEQRRSTPGSRSSVGTVTLLSNSLRMLYSRAG 121 Score = 108 bits (270), Expect = 1e-21, Method: Composition-based stats. Identities = 50/191 (26%), Positives = 81/191 (42%), Gaps = 11/191 (5%) Query: 608 NPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATI 667 + + +++ GAR +NL+ V + +P T TGVSGSGKS+L TL+ AQR+ + Sbjct: 4 STDPYVRVRGAREHNLRGVDVDIPRDALTVFTGVSGSGKSSLAFGTLYAEAQRRYFESVA 63 Query: 668 AEPAPYRDIQGLEHFDKV------IDIDQSPIGRTPRSNPATYTGVFTPVRELF--AGVP 719 G D V + ++Q RS+ T T + +R L+ AG Sbjct: 64 PYARRLIHQIGAPKVDSVTGLPPAVSLEQRRSTPGSRSSVGTVTLLSNSLRMLYSRAGAY 123 Query: 720 ESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIK 779 + A FS N G C +C G G I + VP ++ Sbjct: 124 PAGAERLDSDAFSPNTAAGACPSCHGIGRIH---RTDEQLLVPDPDLSIRQGAIAAWPGA 180 Query: 780 YKGKTIHEVLD 790 ++GK + ++L+ Sbjct: 181 WQGKNLRDILE 191 Score = 83.8 bits (206), Expect = 3e-14, Method: Composition-based stats. Identities = 32/116 (27%), Positives = 47/116 (40%), Gaps = 19/116 (16%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 63 + + G HNL+ + P VTG+SGSGKS+L L E R E + + Sbjct: 475 VRLSGVDRHNLRGVTAEFPLGVFTAVTGVSGSGKSTLVGQALAGEVAGRLAE--PGFPVR 532 Query: 64 FLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPR 119 L + ++Q+ PRS + T T + D +R LF E R Sbjct: 533 RL-----------------VEVDQRPIGRTPRSNLATYTGLFDVVRRLFTASDEAR 571 >UniRef50_D2AS77 Excinuclease ABC subunit A n=1 Tax=Streptosporangium roseum DSM 43021 RepID=D2AS77_STRRD Length = 880 Score = 745 bits (1925), Expect = 0.0, Method: Composition-based stats. Identities = 295/776 (38%), Positives = 405/776 (52%), Gaps = 60/776 (7%) Query: 218 AESFETALELSGGTAVVADMDDPKAE-ELLFSANFACPICGYSMRELEPRLFSFNNPAGA 276 A + A + V + +LFS A P L+ FS N P GA Sbjct: 99 AVALRQARGGGSARSSVGTVTHLSNVLRMLFSRAGAYPP---GAEHLDSDSFSPNTPIGA 155 Query: 277 CPTCDGLGVQQYFDPDRVIQNPELSLAGGAIRGWDRRNFYYFQMLKSLADHYKFDVEAPW 336 CP C GLG + ++ +P LS+ GA+ W + + + + DV+ PW Sbjct: 156 CPHCHGLGRVHTVSEESLVPDPGLSIREGAVAAW--PGAWQGKNYRDILVELGVDVDRPW 213 Query: 337 GSLSANVHKVVLYGSGKENIEFKYMNDRGD-TSIRRHPFEGVLHNMERRYKETESSAVRE 395 L A + +L + + + D G + F + Y T+S+++R Sbjct: 214 SELPAEQREWILMTDEQPVVTVHPVRDAGKVARDYQGTFSSARRYVLHTYATTKSASLRA 273 Query: 396 ELAKFISNRPCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKI 455 A+F+ + PC CEG RLR EA V + ++ + + E + AG Sbjct: 274 RAARFLLSSPCPVCEGRRLRPEALAVRFAGRDITEMAALPLTELAEVLSGATRAGDLDAA 333 Query: 456 A---------EKILKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLV 506 + + +R++ + +GL YL+ RS TLS GE QR+RLA+Q+ +GL Sbjct: 334 GPPDARAEAAAALAGNLLERIRTMAELGLGYLSTDRSTATLSSGELQRLRLATQLRSGLF 393 Query: 507 GVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGV 566 GV+YVLDEPS GLH D E LL + LR GN++ VVEH+ D +R AD ++D+GPGAG Sbjct: 394 GVLYVLDEPSAGLHPSDTEALLEAMRRLRGAGNSLFVVEHNLDVMRQADWIVDVGPGAGE 453 Query: 567 HGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEVPKKRVPANPEKVLKLTGARGNNLKDV 626 HGG V+ G + + V S T +Y+ + + R P L+L G +NL+D+ Sbjct: 454 HGGRVLYSGEVAGLARVAGSATRRYLF--EQADRTGDRDARRPSGWLELRGITRHNLRDL 511 Query: 627 TLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLN----------------------- 663 + P+G FT +TGVSGSGKSTL++ L + L Sbjct: 512 DVRFPLGTFTAVTGVSGSGKSTLVSQVLTGVVAEHLGADADDPGQLGAREGEDTGAGHEG 571 Query: 664 -------------------GATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATY 704 G+T E + GLE +++ +DQ PIGRTPRSN ATY Sbjct: 572 GGGRAGPDGSTTFPGPGPDGSTPEEVVTHVAATGLEPIRRLVRVDQRPIGRTPRSNLATY 631 Query: 705 TGVFTPVRELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCD 764 TG+F VR LFA PE+R GY GRFSFNV GGRCE CQG G I +EM FLP PC Sbjct: 632 TGLFDAVRRLFAATPEARRHGYDAGRFSFNVPGGRCENCQGQGSIFIEMLFLPGATAPCP 691 Query: 765 QCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLG 824 C G RYN ETL + G++I +VLDMT+E+AR+F VP R L+ L +VGL Y+RLG Sbjct: 692 VCHGARYNPETLRVTVAGRSIADVLDMTVEQARDFLREVPGAVRSLEVLSEVGLGYLRLG 751 Query: 825 QSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNT 884 Q ATTLSGGEAQRVKLA EL + G TLY+LDEPT+GLH AD+ L+ L L GNT Sbjct: 752 QPATTLSGGEAQRVKLASELQRVRRGHTLYVLDEPTSGLHPADVDLLVAQLRGLVAAGNT 811 Query: 885 IVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLKPML 940 +V++EH++DV+ DW++DLGP GG GG ++ +G P VA S TA +L L Sbjct: 812 VVLVEHDMDVVAGTDWVIDLGPGGGEAGGRVVAAGPPHVVAGARDSATAPYLARRL 867 Score = 177 bits (448), Expect = 2e-42, Method: Composition-based stats. Identities = 76/204 (37%), Positives = 103/204 (50%), Gaps = 15/204 (7%) Query: 402 SNRPCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILK 461 + PC C G R E V V + + DM++ A +F + A Sbjct: 686 ATAPCPVCHGARYNPETLRVTVAGRSIADVLDMTVEQARDFLREVPGA------------ 733 Query: 462 EIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVG-VMYVLDEPSIGLH 520 L+ L VGL YL L + A TLSGGEAQR++LAS++ G +YVLDEP+ GLH Sbjct: 734 --VRSLEVLSEVGLGYLRLGQPATTLSGGEAQRVKLASELQRVRRGHTLYVLDEPTSGLH 791 Query: 521 QRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAI 580 D + L+ L L GNTV++VEHD D + D VID+GPG G GG VVA GP + Sbjct: 792 PADVDLLVAQLRGLVAAGNTVVLVEHDMDVVAGTDWVIDLGPGGGEAGGRVVAAGPPHVV 851 Query: 581 MAVPESLTGQYMSGKRKIEVPKKR 604 +S T Y++ + +R Sbjct: 852 AGARDSATAPYLARRLARREGGRR 875 Score = 173 bits (438), Expect = 3e-41, Method: Composition-based stats. Identities = 56/113 (49%), Positives = 83/113 (73%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 63 I VR AR HNL+++++ PRD++++ TG+SGSGKSSLAF T+YAE QRRY+ES++ YAR+ Sbjct: 21 IRVRDAREHNLRHVDVEAPRDRIVLFTGVSGSGKSSLAFGTVYAEAQRRYLESVTPYARR 80 Query: 64 FLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVG 116 + + P V I GL PA+++ Q + RS+VGT+T + + LR+LF+R G Sbjct: 81 LIEQVGAPKVGDITGLPPAVALRQARGGGSARSSVGTVTHLSNVLRMLFSRAG 133 Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats. Identities = 50/208 (24%), Positives = 85/208 (40%), Gaps = 13/208 (6%) Query: 610 EKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAE 669 + ++++ AR +NL+ V + P TGVSGSGKS+L T++ AQR+ + Sbjct: 18 DPMIRVRDAREHNLRHVDVEAPRDRIVLFTGVSGSGKSSLAFGTVYAEAQRRYLESVTPY 77 Query: 670 PAPYRDIQGLEHFDKV------IDIDQSPIGRTPRSNPATYTGVFTPVRELF--AGVPES 721 + G + + + Q+ G + RS+ T T + +R LF AG Sbjct: 78 ARRLIEQVGAPKVGDITGLPPAVALRQARGGGSARSSVGTVTHLSNVLRMLFSRAGAYPP 137 Query: 722 RARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKYK 781 A FS N G C C G G + + VP + ++ Sbjct: 138 GAEHLDSDSFSPNTPIGACPHCHGLGRVHT---VSEESLVPDPGLSIREGAVAAWPGAWQ 194 Query: 782 GKTIHEVL-DMTIEEAREFFDAVPALAR 808 GK ++L ++ ++ R + +PA R Sbjct: 195 GKNYRDILVELGVDVDRPW-SELPAEQR 221 Score = 77.7 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 39/157 (24%), Positives = 61/157 (38%), Gaps = 36/157 (22%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTL---------------YAE 48 +E+RG HNL+++++ P VTG+SGSGKS+L L Sbjct: 498 LELRGITRHNLRDLDVRFPLGTFTAVTGVSGSGKSTLVSQVLTGVVAEHLGADADDPGQL 557 Query: 49 GQRRYVESLSAYARQFL-------SLMEKPDVD-----------HIEGLSPA---ISIEQ 87 G R ++ + + + P D GL P + ++Q Sbjct: 558 GAREGEDTGAGHEGGGGRAGPDGSTTFPGPGPDGSTPEEVVTHVAATGLEPIRRLVRVDQ 617 Query: 88 KSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCPDHD 124 + PRS + T T + D +R LFA E R +D Sbjct: 618 RPIGRTPRSNLATYTGLFDAVRRLFAATPEARRHGYD 654 >UniRef50_A1SWH0 Excinuclease ABC, A subunit n=15 Tax=Bacteria RepID=A1SWH0_PSYIN Length = 851 Score = 742 bits (1915), Expect = 0.0, Method: Composition-based stats. Identities = 315/865 (36%), Positives = 456/865 (52%), Gaps = 73/865 (8%) Query: 100 TITEIHDYLRLLFARVGEPRCPDHDVPLAAQTVSQMVDNVLSQPEGKRLM----LLAPII 155 + T ++ ++R+ AR + D D+P +V GK + + A Sbjct: 28 SHTTLNSFVRVRGARENNLQNVDVDLP-----RDAIVAFTGVSGSGKSSLAFGTIFAEAQ 82 Query: 156 KERKGEHTKTLENLASQGYIRARIDGEVCDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQ 215 + L QG+ R+D E+ L PP + LQ++ R + Sbjct: 83 RRFFESVAPYARRLIQQGHTP-RVD-EITGL--PPAVALQQR------------RGTPSS 126 Query: 216 RLAESFETALELSGGTAVVADMDDPKAEELLFSANFACPICGYSMRELEPRLFSFNNPAG 275 R + V + + + G LE FS N G Sbjct: 127 R---------------SSVGTVTTLSNSLRMLYSRTGLYPDG--APRLESDSFSPNTAMG 169 Query: 276 ACPTCDGLGVQQYFDPDRVIQNPELSLAGGAIRGWDRRNFYYFQMLKSLADHYKFDVEAP 335 ACPTC GLG ++ +P LS++ GAI W + + L+ + +DV+ Sbjct: 170 ACPTCQGLGTAHTVTEASLVLDPSLSISEGAITAW--PGAWQGKNLRDILSVLGYDVDTA 227 Query: 336 WGSLSANVHKVVLYGSGKENIEFKYMNDRGDTSIRRHPFEGVLHNMERRYKETESSAVRE 395 W LS +L+ + +E + +R + F + +++S++VR+ Sbjct: 228 WNQLSRTDRDWILFTEEQPVVEIMPVRERP--RPYKGKFWSAKSYVMHTLADSKSASVRK 285 Query: 396 ELAKFISNRPCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKI 455 + K++ + PC C G+ LR EA V + ++ + + F+ L +A Sbjct: 286 RVLKYVKSGPCLICAGSGLRSEALAVTFNGHTIADLNALPLTELRHAFDYLGVANT---A 342 Query: 456 AEKILKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEP 515 ++ I ++ RL L+++GL YL+L R+ TLS GE QR+R+A+Q+ AGL GV+YVLDEP Sbjct: 343 SDTITSDLTRRLDVLLDLGLGYLSLGRATPTLSPGEMQRLRIATQLRAGLFGVIYVLDEP 402 Query: 516 SIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEG 575 S GLH D E LL L L+ GN+V VVEH+ D +R AD VID+GP AG HGG+V+ G Sbjct: 403 SAGLHPADAEPLLAVLEELKSSGNSVFVVEHNMDVVRRADWVIDVGPLAGEHGGKVLYSG 462 Query: 576 PLEAIMAVPESLTGQYMSGKRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLF 635 P + VP S+T +++ + +P R +P L LTG +NL+ + P+G+ Sbjct: 463 PTAGLADVPASITREFLFANER-PIPATRALRDPIGWLGLTGITRHNLRGIDAEFPLGVL 521 Query: 636 TCITGVSGSGKSTLINDTLFPIAQRQLNGATIA-----------------------EPAP 672 T +TGVSGSGKSTL++ L L+ E Sbjct: 522 TAVTGVSGSGKSTLVSQVLAEAVGLHLHPDEDPIAGTASTGSATGEKDDQSEPKPVEITT 581 Query: 673 YRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESRARGYTPGRFS 732 + I G E ++++ +DQ PIGRTPRSN ATYTG+F VR FA +PE+R+R ++P RFS Sbjct: 582 VKAITGAEPINRLVRVDQKPIGRTPRSNLATYTGLFDAVRTTFAAIPEARSRKFSPSRFS 641 Query: 733 FNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKYKGKTIHEVLDMT 792 FNV GGRCE C G+G + V + FLP Y PC C G RYN ETLE+ Y+ K I EVL++T Sbjct: 642 FNVPGGRCETCLGEGFVAVGLLFLPGSYSPCPDCGGSRYNPETLEVTYRNKNIAEVLELT 701 Query: 793 IEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQT 852 ++ A F VP+ R L+TL +VGL Y+RLGQ AT LSGGEAQR+KLA EL + G T Sbjct: 702 VDAAVVFLADVPSALRSLETLSEVGLGYLRLGQPATELSGGEAQRIKLATELQRARRGHT 761 Query: 853 LYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADWIVDLGPEGGSGG 912 LY+LDEPTTGLH AD+ LL L++L D GNT++V+EH++DV+ ADW++D+GP GG G Sbjct: 762 LYVLDEPTTGLHPADVLLLLTQLNRLVDAGNTVIVVEHDMDVVSAADWVIDIGPAGGDKG 821 Query: 913 GEILVSGTPETVAECEASHTARFLK 937 G I+ +GTP TVA AS TA +L Sbjct: 822 GHIVAAGTPHTVAVHPASRTAPYLA 846 Score = 178 bits (453), Expect = 6e-43, Method: Composition-based stats. Identities = 54/113 (47%), Positives = 85/113 (75%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 63 + VRGAR +NL+N+++ +PRD ++ TG+SGSGKSSLAF T++AE QRR+ ES++ YAR+ Sbjct: 36 VRVRGARENNLQNVDVDLPRDAIVAFTGVSGSGKSSLAFGTIFAEAQRRFFESVAPYARR 95 Query: 64 FLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVG 116 + P VD I GL PA++++Q+ + + RS+VGT+T + + LR+L++R G Sbjct: 96 LIQQGHTPRVDEITGLPPAVALQQRRGTPSSRSSVGTVTTLSNSLRMLYSRTG 148 Score = 99.2 bits (246), Expect = 6e-19, Method: Composition-based stats. Identities = 44/165 (26%), Positives = 66/165 (40%), Gaps = 10/165 (6%) Query: 596 RKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLF 655 R I +++ GAR NNL++V + LP TGVSGSGKS+L T+F Sbjct: 19 RHIPDSASVSHTTLNSFVRVRGARENNLQNVDVDLPRDAIVAFTGVSGSGKSSLAFGTIF 78 Query: 656 PIAQRQL------NGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFT 709 AQR+ + + + + + + Q + RS+ T T + Sbjct: 79 AEAQRRFFESVAPYARRLIQQGHTPRVDEITGLPPAVALQQRRGTPSSRSSVGTVTTLSN 138 Query: 710 PVRELFAGV---PESRARGYTPGRFSFNVRGGRCEACQGDGVIKV 751 +R L++ P+ R FS N G C CQG G Sbjct: 139 SLRMLYSRTGLYPDGAPR-LESDSFSPNTAMGACPTCQGLGTAHT 182 Score = 87.3 bits (215), Expect = 3e-15, Method: Composition-based stats. Identities = 60/269 (22%), Positives = 92/269 (34%), Gaps = 75/269 (27%) Query: 6 VRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYV----------- 54 + G HNL+ I+ P L VTG+SGSGKS+L L AE ++ Sbjct: 501 LTGITRHNLRGIDAEFPLGVLTAVTGVSGSGKSTLVSQVL-AEAVGLHLHPDEDPIAGTA 559 Query: 55 ESLSAYARQFLSLMEKP----DVDHIEGLSPA---ISIEQKSTSHNPRSTVGTITEIHDY 107 + SA + KP V I G P + ++QK PRS + T T + D Sbjct: 560 STGSATGEKDDQSEPKPVEITTVKAITGAEPINRLVRVDQKPIGRTPRSNLATYTGLFDA 619 Query: 108 LRLLFARVGEPR----------------------------------------CPDHD--- 124 +R FA + E R CPD Sbjct: 620 VRTTFAAIPEARSRKFSPSRFSFNVPGGRCETCLGEGFVAVGLLFLPGSYSPCPDCGGSR 679 Query: 125 ---VPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRA---- 177 L ++ + VL ++ LA + +TL + GY+R Sbjct: 680 YNPETLEVTYRNKNIAEVLELTVDAAVVFLADV--PSALRSLETLSEV-GLGYLRLGQPA 736 Query: 178 --RIDGEVCDLSDPPKLELQKK-HTIEVV 203 GE + +L+ ++ HT+ V+ Sbjct: 737 TELSGGEAQRIKLATELQRARRGHTLYVL 765 >UniRef50_D1BHG7 Excinuclease ABC, A subunit n=1 Tax=Sanguibacter keddieii DSM 10542 RepID=D1BHG7_SANKS Length = 863 Score = 734 bits (1896), Expect = 0.0, Method: Composition-based stats. Identities = 292/757 (38%), Positives = 417/757 (55%), Gaps = 52/757 (6%) Query: 231 TAVVADMDDPKAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFD 290 + V + + + GY+ R L+ FS N AGACP C G+GV + Sbjct: 104 RSSVGTVTTLSNSLRMLFSRAGTFPEGYATR-LDSDAFSPNTVAGACPECHGVGVARTVT 162 Query: 291 PDRVIQNPELSLAGGAIRGWDRRNFYYFQMLKSLADHYKFDVEAPWGSLSANVHKVVLYG 350 D ++ +P LS+ GAI W + + L+ + +DV+ PW L +L+ Sbjct: 163 EDTLVADPSLSIRDGAITAW--PGAWQGKNLRDIVIALGYDVDRPWRDLPREDRDWLLFT 220 Query: 351 SGKENIEFKYMNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCE 410 + ++ DR F + ++ S +R ++ +F+ + PC C Sbjct: 221 DEQPVVQITPQRDR-VAKPYNGRFWSAQKYVLHILADSSSQTMRAKVLQFVRSGPCPVCG 279 Query: 411 GTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNL------------KLAGQRAKIAEK 458 GT LR+EA V + ++ + + E +G+ +A Sbjct: 280 GTGLRQEALAVTFAGRTIAEMNALPLTELAEVIRPTTQLTDAAPALPTNRSGEHTDVAVA 339 Query: 459 ILKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIG 518 I ++ R+ L ++GL YL L R TLS GE QR+RLA+Q+ +GL GV+YVLDEPS G Sbjct: 340 ITTDLLARIGVLTDLGLGYLGLGRVTTTLSPGEMQRLRLATQLRSGLFGVVYVLDEPSAG 399 Query: 519 LHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLE 578 LH D E L+ L L++ GN+V +VEH+ D +R AD V+D+GP AG GGEV+ G + Sbjct: 400 LHPADAEPLMEVLEQLKESGNSVFIVEHNMDLVRKADWVVDVGPAAGTGGGEVLYSGAVA 459 Query: 579 AIMAVPESLTGQYMSGKRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCI 638 + V +S+T ++ + + + +R P+ L + G +NL + ++P+G+ + Sbjct: 460 GLADVEQSVTRPFLFPE-QGDGAVERPVREPKGWLTVEGVTVHNLDGLDASVPLGMLVAV 518 Query: 639 TGVSGSGKSTLINDTLFPIAQRQLNGATI------------------------------- 667 TGVSGSGKSTL++ L + + LNG + Sbjct: 519 TGVSGSGKSTLVSRVLRDVVRDHLNGDGLPGGSVAVDEDVDGAEGTAEESEEAGLSEAVL 578 Query: 668 ----AEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESRA 723 A+ RD QGLEH D+++ +DQ PIGRTPRSN ATYTG+F VR FA +R Sbjct: 579 PDARADVLTVRDAQGLEHVDRLVQVDQKPIGRTPRSNLATYTGLFDAVRSAFAATDLARE 638 Query: 724 RGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKYKGK 783 RGYT GRFSFNV GGRCE C G+G + VE+ FLP Y C +C G RYN ETLE+ Y G+ Sbjct: 639 RGYTAGRFSFNVAGGRCETCLGEGFVSVELLFLPGSYGKCPECHGARYNDETLEVTYDGR 698 Query: 784 TIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARE 843 +I +VL +T+E+A E +PA AR L+TL+DVGL Y+RLGQ AT LSGGEAQR+KLA E Sbjct: 699 SIADVLALTVEDAAEALSGIPAAARSLRTLLDVGLGYLRLGQPATELSGGEAQRIKLATE 758 Query: 844 LSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADWIVD 903 L + G TLY+LDEPTTGLH AD++ LL L L D G+++V++EH++DV+ +ADW+VD Sbjct: 759 LQRVRRGHTLYLLDEPTTGLHPADVRLLLGQLESLVDSGDSVVIVEHDMDVVASADWVVD 818 Query: 904 LGPEGGSGGGEILVSGTPETVAECEASHTARFLKPML 940 LGP GG GG ++ SGTP VA S TA +L L Sbjct: 819 LGPSGGDAGGRVVASGTPVDVAAEAGSRTAPYLATAL 855 Score = 183 bits (465), Expect = 3e-44, Method: Composition-based stats. Identities = 72/204 (35%), Positives = 103/204 (50%), Gaps = 15/204 (7%) Query: 402 SNRPCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILK 461 S C C G R E V + + + +++ A E + + A + Sbjct: 674 SYGKCPECHGARYNDETLEVTYDGRSIADVLALTVEDAAEALSGIPAAARS--------- 724 Query: 462 EIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVG-VMYVLDEPSIGLH 520 L+ L++VGL YL L + A LSGGEAQRI+LA+++ G +Y+LDEP+ GLH Sbjct: 725 -----LRTLLDVGLGYLRLGQPATELSGGEAQRIKLATELQRVRRGHTLYLLDEPTTGLH 779 Query: 521 QRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAI 580 D LLG L L D G++V++VEHD D + +AD V+D+GP G GG VVA G + Sbjct: 780 PADVRLLLGQLESLVDSGDSVVIVEHDMDVVASADWVVDLGPSGGDAGGRVVASGTPVDV 839 Query: 581 MAVPESLTGQYMSGKRKIEVPKKR 604 A S T Y++ P R Sbjct: 840 AAEAGSRTAPYLATALGERGPTSR 863 Score = 173 bits (440), Expect = 2e-41, Method: Composition-based stats. Identities = 52/114 (45%), Positives = 84/114 (73%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 63 + VRGA +NL+++++ +PRD ++ TG+SGSGKSSLAF T++ E QRRY+ES++ YAR+ Sbjct: 13 VRVRGANENNLRDVDVDVPRDAIVAFTGVSGSGKSSLAFGTIFTEAQRRYLESVAPYARR 72 Query: 64 FLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGE 117 + P V+ I GL PA++++Q+ + + RS+VGT+T + + LR+LF+R G Sbjct: 73 LIQQGHDPHVESITGLPPAVALQQRRGAPSSRSSVGTVTTLSNSLRMLFSRAGT 126 Score = 105 bits (262), Expect = 1e-20, Method: Composition-based stats. Identities = 45/154 (29%), Positives = 67/154 (43%), Gaps = 9/154 (5%) Query: 604 RVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQL- 662 P P+ +++ GA NNL+DV + +P TGVSGSGKS+L T+F AQR+ Sbjct: 4 NTPTTPDAFVRVRGANENNLRDVDVDVPRDAIVAFTGVSGSGKSSLAFGTIFTEAQRRYL 63 Query: 663 -----NGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAG 717 + + ++ + + + Q + RS+ T T + +R LF+ Sbjct: 64 ESVAPYARRLIQQGHDPHVESITGLPPAVALQQRRGAPSSRSSVGTVTTLSNSLRMLFSR 123 Query: 718 V---PESRARGYTPGRFSFNVRGGRCEACQGDGV 748 PE A FS N G C C G GV Sbjct: 124 AGTFPEGYATRLDSDAFSPNTVAGACPECHGVGV 157 Score = 78.1 bits (191), Expect = 2e-12, Method: Composition-based stats. Identities = 37/141 (26%), Positives = 56/141 (39%), Gaps = 33/141 (23%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTL------------------ 45 + V G HNL ++ +P L+ VTG+SGSGKS+L L Sbjct: 493 LTVEGVTVHNLDGLDASVPLGMLVAVTGVSGSGKSTLVSRVLRDVVRDHLNGDGLPGGSV 552 Query: 46 -------YAEGQRR------YVESLSAYARQFLSLMEKPDVDHIEGLSPAISIEQKSTSH 92 AEG E++ AR ++ D +E + + ++QK Sbjct: 553 AVDEDVDGAEGTAEESEEAGLSEAVLPDARA--DVLTVRDAQGLEHVDRLVQVDQKPIGR 610 Query: 93 NPRSTVGTITEIHDYLRLLFA 113 PRS + T T + D +R FA Sbjct: 611 TPRSNLATYTGLFDAVRSAFA 631 >UniRef50_B8FST5 ABC transporter related n=5 Tax=Firmicutes RepID=B8FST5_DESHD Length = 820 Score = 733 bits (1893), Expect = 0.0, Method: Composition-based stats. Identities = 266/705 (37%), Positives = 408/705 (57%), Gaps = 16/705 (2%) Query: 237 MDDPKAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQ 296 ++ + E F C CG+ M +L FS+N GACPTC GLG + D V+ Sbjct: 127 QEELEKREDEFKVYMYCNHCGHKMDKLTRTYFSYNTREGACPTCQGLGKILQVNKDNVV- 185 Query: 297 NPELSLAGGAIRGWDRR-NFYYFQMLKSLADHYKFDV--EAPWGSLSANVHKVVLYGSGK 353 N +LSL GA+ W+++ Y +L + HY + + P + ++ YG Sbjct: 186 NEKLSLEAGAVDFWEQKYKDYQISVLYNAFQHYGVPIEPDTPVREFTNVQKAILFYGVDS 245 Query: 354 ENIEFKYMNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGTR 413 + ++ + + + ++ FEG+ + RR E L+ + + + C C G R Sbjct: 246 DQVKEFFPDIQAPKTVGGGRFEGIYPVLWRRIAEKSGD--PRGLSAYFAEQICPDCAGER 303 Query: 414 LRREARHVYVENTPLPAISDMSIGHAMEFFNNLK--LAGQRAKIAEKILKEIGDRLKFLV 471 L +R V V T LP ++ +S+ ++ L+ + G + L ++ +++ ++ Sbjct: 304 LNGLSRSVTVLGTRLPELASLSLEELQDWLIKLEDSVTGTHQDLVASYLNDLKTKIRRII 363 Query: 472 NVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTL 531 VGL YL+L R TLSGGEAQRI+LA+ + + L G++Y++DEP+IGLH +D + ++ L Sbjct: 364 KVGLGYLSLDRQTMTLSGGEAQRIKLAATLDSTLTGIIYIMDEPTIGLHPQDTQGIIQIL 423 Query: 532 IHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQY 591 LRDLGNTVIV+EHD D + AAD ++DIGPGAG GGE+V +G ++ + S+TG Y Sbjct: 424 KELRDLGNTVIVIEHDMDVMSAADFIVDIGPGAGKLGGEIVGQGSIDELKEQGRSVTGLY 483 Query: 592 MSGKRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLIN 651 ++ R + + E +++ NLK++ + PVG +TGVSGSGKSTL+ Sbjct: 484 LN--RPVREARSYRKGTGE-FIEVQHGDLYNLKNINVRFPVGCLISVTGVSGSGKSTLVF 540 Query: 652 DTLFPIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPV 711 + L R +P + G E F+++I ++QSP+ R RSN ATY+GV+T + Sbjct: 541 EVLAKGKYRSQG-----DPMKRNHVAGTELFEQIITVEQSPVTRMKRSNVATYSGVYTEI 595 Query: 712 RELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRY 771 R++F + E+R +G TP FSFN RGGRCE C+G G + M F D+ V C C G ++ Sbjct: 596 RKIFGNLSEARRKGITPRHFSFNSRGGRCENCEGLGYVVSNMLFFEDLEVSCPVCHGDQF 655 Query: 772 NRETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLS 831 E L +KY+G +I +VL M++EEA F P + + L+ L +VGL Y+ LGQ+ TTLS Sbjct: 656 QDEVLSVKYQGHSIKDVLGMSVEEALAVFALHPRITKVLELLEEVGLGYLELGQTLTTLS 715 Query: 832 GGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHN 891 GGE QR+KLA+EL LY++DEPTTGLH D++ L +L+++ D G+T++V+EHN Sbjct: 716 GGEGQRLKLAKELIGNEGKTNLYLIDEPTTGLHPLDVENFLALLNRMVDAGSTVIVVEHN 775 Query: 892 LDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFL 936 V++ +DWI+DLGPEGG GG ++ GTPE + S T RFL Sbjct: 776 QQVMQASDWIIDLGPEGGHKGGRVMAVGTPEQIKSEPDSVTGRFL 820 Score = 165 bits (418), Expect = 8e-39, Method: Composition-based stats. Identities = 54/138 (39%), Positives = 83/138 (60%), Gaps = 6/138 (4%) Query: 1 MDKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAY 60 M I + G R NLK+I+L +PR+KL++ TGLSGSGK++LA D LY E QR+Y+E++ Sbjct: 1 MADIFLHGVREGNLKDISLTLPRNKLVIFTGLSGSGKTTLAIDVLYQECQRQYLEAIG-- 58 Query: 61 ARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRC 120 + KP +D + SPA+ I Q NPRSTVGT+T I+ LR+++ ++ + C Sbjct: 59 ----YQGIHKPKLDELRNASPAVRITQNEYRKNPRSTVGTVTNIYTELRMIYEKLSQRTC 114 Query: 121 PDHDVPLAAQTVSQMVDN 138 P + A + ++ Sbjct: 115 PHCHRDIRADQCQEELEK 132 Score = 104 bits (260), Expect = 1e-20, Method: Composition-based stats. Identities = 48/171 (28%), Positives = 68/171 (39%), Gaps = 36/171 (21%) Query: 615 LTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAEPAPYR 674 L G R NLKD++LTLP TG+SGSGK+TL D L+ QRQ A + Sbjct: 6 LHGVREGNLKDISLTLPRNKLVIFTGLSGSGKTTLAIDVLYQECQRQYLEAIGYQGIHKP 65 Query: 675 DIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPES------------- 721 + L + + I Q+ + PRS T T ++T +R ++ + + Sbjct: 66 KLDELRNASPAVRITQNEYRKNPRSTVGTVTNIYTELRMIYEKLSQRTCPHCHRDIRADQ 125 Query: 722 -----------------------RARGYTPGRFSFNVRGGRCEACQGDGVI 749 + T FS+N R G C CQG G I Sbjct: 126 CQEELEKREDEFKVYMYCNHCGHKMDKLTRTYFSYNTREGACPTCQGLGKI 176 Score = 84.2 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 41/118 (34%), Positives = 61/118 (51%), Gaps = 11/118 (9%) Query: 2 DKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYA 61 + IEV+ +NLKNIN+ P LI VTG+SGSGKS+L F+ L A+G+ Sbjct: 500 EFIEVQHGDLYNLKNINVRFPVGCLISVTGVSGSGKSTLVFEVL-AKGKY---------- 548 Query: 62 RQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPR 119 R M++ V E I++EQ + RS V T + ++ +R +F + E R Sbjct: 549 RSQGDPMKRNHVAGTELFEQIITVEQSPVTRMKRSNVATYSGVYTEIRKIFGNLSEAR 606 >UniRef50_A8MGE0 Excinuclease ABC, A subunit n=1 Tax=Alkaliphilus oremlandii OhILAs RepID=A8MGE0_ALKOO Length = 799 Score = 728 bits (1879), Expect = 0.0, Method: Composition-based stats. Identities = 270/677 (39%), Positives = 422/677 (62%), Gaps = 12/677 (1%) Query: 267 LFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPELSLAGGAIRGWD-RRNFYYFQMLKSLA 325 FS+NNP C C G G + D D++I N +L GAI W+ + +Y ++L+ + Sbjct: 128 DFSYNNPKVWCEMCRGTGEKYVLDYDKIIDNKNRTLKEGAISYWNQGSDNFYDKLLEKVC 187 Query: 326 DHYKFDVEAPWGSLSANVHKVVLYGSGKENIEFKYMNDRGDTSIRRHPFEGVLHNMERRY 385 HY D+ P LS + + +L G + +Y N + + + F+GV+ + + Sbjct: 188 MHYDIDMNTPIKDLSDDKLEFLLNGKSDSKFKVRYKNYKKNYRTKEVEFKGVIRELNEKL 247 Query: 386 KETESSAVREELAKFISNRPCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNN 445 ++ ++ + + + K+I C C G RL+ E V + + ++ ++ ++ N Sbjct: 248 EDIDTPSTLKSIHKYIKKDKCDGCNGDRLKDEMLEVKINGENISSLESKTVTDLKQWLVN 307 Query: 446 LK--LAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGA 503 L KI I +E+ R+ L + L YL+L+RS +LSGGE+QRIRLA+Q+ Sbjct: 308 LIQITDNTCKKIIYDICEEVIKRITNLEKLQLGYLSLNRSIPSLSGGESQRIRLANQLAC 367 Query: 504 GLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPG 563 L ++YVLDEP++GLH D E + L L+ +GNT+++VEH+ D + +AD++ID+GPG Sbjct: 368 NLSSLLYVLDEPTMGLHSNDIENIEIILKDLKQMGNTILLVEHNLDIMLSADYLIDMGPG 427 Query: 564 AGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEVPKKRVPANPEKVLKLTGARGNNL 623 G++GGE+V +G + I ESLTG+Y+SG+ KI +P ++ +N + + A+ NN+ Sbjct: 428 GGIYGGEIVGKGSPDEIKNHDESLTGKYLSGELKINIPHRKRDSNAS--ILVKKAKYNNI 485 Query: 624 KDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAEPAPYRDIQGLEHFD 683 K +P+ +TGVSG+GKSTL ++ L P R+ N +I G+++ + Sbjct: 486 KGEDFFIPLNNLVVVTGVSGAGKSTLTDNILEPSLTRKKN-------INCEEIIGIQNIN 538 Query: 684 KVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESRARGYTPGRFSFNVRGGRCEAC 743 KVI +DQ+PIGR+P+SN AT+TG+F +R+L++ +R R Y+ FSFN GGRCE+C Sbjct: 539 KVIKVDQTPIGRSPKSNVATFTGMFDFIRDLYSKTELARKRKYSKSEFSFNTPGGRCESC 598 Query: 744 QGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAV 803 +GDG +K++M F+ D YV CD+CKGKRY ++ LEI Y GK I +VL+MT+ EA EFF Sbjct: 599 KGDGQVKIDMSFMADTYVVCDECKGKRYEKKILEINYNGKNISDVLNMTVLEAHEFFIEN 658 Query: 804 PALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGL 863 +++ L+ L+DVGL YI+LGQ ATT+SGGEAQR+KLA+ LS LYILDEPT GL Sbjct: 659 KSISSILKCLIDVGLEYIKLGQPATTISGGEAQRIKLAKYLSNDSATGNLYILDEPTVGL 718 Query: 864 HFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPET 923 H DI +L+ +L+++ D+GN+IVV+EHN+++IK AD+I+D+GP GG GG+I+ GTPE Sbjct: 719 HLHDINKLIALLNEIVDRGNSIVVVEHNMELIKCADYIIDIGPVGGPNGGKIIDCGTPEH 778 Query: 924 VAECEASHTARFLKPML 940 +A + + L+ ++ Sbjct: 779 IAANNKASVSNKLRKII 795 Score = 180 bits (457), Expect = 2e-43, Method: Composition-based stats. Identities = 65/117 (55%), Positives = 85/117 (72%) Query: 1 MDKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAY 60 MD I++ AR +NLK+I + IP +K+ VVTG+SGSGKSSL FDT+YAE +R ++ES+S Sbjct: 1 MDNIKIIRARENNLKDIEVEIPVNKITVVTGVSGSGKSSLVFDTIYAESERMFLESISIN 60 Query: 61 ARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGE 117 S + KPDV I L PAI+I QK T+ NPRS VGT+T+I +LRLLF+RVG Sbjct: 61 LESITSKLPKPDVYKISNLLPAIAISQKKTNRNPRSYVGTVTDISRFLRLLFSRVGV 117 Score = 120 bits (300), Expect = 4e-25, Method: Composition-based stats. Identities = 53/146 (36%), Positives = 75/146 (51%), Gaps = 7/146 (4%) Query: 613 LKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQL------NGAT 666 +K+ AR NNLKD+ + +PV T +TGVSGSGKS+L+ DT++ ++R N + Sbjct: 4 IKIIRARENNLKDIEVEIPVNKITVVTGVSGSGKSSLVFDTIYAESERMFLESISINLES 63 Query: 667 IAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESRARG- 725 I P D+ + + I I Q R PRS T T + +R LF+ V + Sbjct: 64 ITSKLPKPDVYKISNLLPAIAISQKKTNRNPRSYVGTVTDISRFLRLLFSRVGVGKRNKF 123 Query: 726 YTPGRFSFNVRGGRCEACQGDGVIKV 751 YT G FS+N CE C+G G V Sbjct: 124 YTEGDFSYNNPKVWCEMCRGTGEKYV 149 Score = 90.4 bits (223), Expect = 3e-16, Method: Composition-based stats. Identities = 31/113 (27%), Positives = 59/113 (52%), Gaps = 13/113 (11%) Query: 3 KIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYAR 62 I V+ A+ +N+K + IP + L+VVTG+SG+GKS+L + L R+ Sbjct: 474 SILVKKAKYNNIKGEDFFIPLNNLVVVTGVSGAGKSTLTDNILEPSLTRK---------- 523 Query: 63 QFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARV 115 + ++ I+ ++ I ++Q +P+S V T T + D++R L+++ Sbjct: 524 ---KNINCEEIIGIQNINKVIKVDQTPIGRSPKSNVATFTGMFDFIRDLYSKT 573 >UniRef50_B1L257 Excinuclease ABC, A subunit n=1 Tax=Clostridium botulinum A3 str. Loch Maree RepID=B1L257_CLOBM Length = 830 Score = 725 bits (1873), Expect = 0.0, Method: Composition-based stats. Identities = 280/709 (39%), Positives = 410/709 (57%), Gaps = 19/709 (2%) Query: 239 DPKAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNP 298 D E L A +CP C ++L FSFN P GACPTC+G+G+ D ++I + Sbjct: 129 DLDGESELDEATISCPHCQTKHQKLNMGHFSFNKPQGACPTCNGVGIVTTLDLSQLI-DE 187 Query: 299 ELSLAGGAIRGWDRRNFY--YFQMLKSLADHYKF--DVEAPWGSLSANVHKVVLYGSGKE 354 +L++ GGA+ W Y L+ A HY F D + V G E Sbjct: 188 KLTIEGGAVSLWLDPVIRTHYANTLRKCAAHYGFIFDPTKAIKDYNELERIVFYDGVDSE 247 Query: 355 NIEFKYMNDRGDTSIRRHPFEGVLHNMERRYKET-ESSAVREELAKFISNRPCASCEGTR 413 + + + + + F G+ + M+ + E+ ++ + I C C G R Sbjct: 248 AFKKYFPDKKAPKRVNDGYFRGMRNFMQEKAAESVRKEIKNSKIERCIRKTDCPDCHGAR 307 Query: 414 LRREARHVYVENTPLPAISDMSIGHAMEFFNNL--KLAGQRAKIAEKILKEIGDRLKFLV 471 L R V ++ + +S ++ L L+ +A ++ +I R K ++ Sbjct: 308 LGAVGRTVTLDGLTIIEMSAFTMEQLYGKIKTLSENLSEIAQIVASAVMGDILKRTKGII 367 Query: 472 NVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTL 531 +GL YL++ R TLSGGEAQRIRLA+ + +GL GV+Y+LDEP+ GLH RD + LL L Sbjct: 368 KIGLGYLSIDRLLGTLSGGEAQRIRLANVMDSGLTGVLYILDEPTTGLHPRDTQLLLQAL 427 Query: 532 IHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQY 591 LRDLGNTV+V+EHD D + D++ID GPGAG GG++VA G I+ S TG+Y Sbjct: 428 NRLRDLGNTVLVIEHDMDFVAHCDYIIDFGPGAGSGGGQIVATGTPREIVKNKASATGKY 487 Query: 592 MSGKRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLIN 651 ++ + +PK+ N + + A +NL+++++ +P+G TGVSGSGKS+L+ Sbjct: 488 LNRANTLALPKE---INTNHCIVVRKAHAHNLQNISVEIPLGQLVSFTGVSGSGKSSLVF 544 Query: 652 DTLFPIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPV 711 DT+ ++ + A I+G EH ++I +DQSPIGR RSN ATYT ++TP+ Sbjct: 545 DTIVKFSE--------SGSAECDSIRGFEHVKEIITLDQSPIGRQSRSNIATYTDLYTPI 596 Query: 712 RELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRY 771 RELFA +P+++ P FSFNV+GGRCE CQG GVI + M FL D+ VPC C GKR+ Sbjct: 597 RELFAALPQAKKLRLKPSDFSFNVKGGRCEKCQGLGVIPLNMQFLDDVEVPCPVCIGKRF 656 Query: 772 NRETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLS 831 ++ L + YK I ++L+ T+ E FF +A +LQTL DVGL Y++LGQS TLS Sbjct: 657 KKKVLSVTYKDNNISDILEATVSENLTFFADNKEIAGRLQTLCDVGLDYLKLGQSTITLS 716 Query: 832 GGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHN 891 GGE QR+KL++E+ K G TLY+LDEPTTGLH DI +LL +L L + N++ VIEH Sbjct: 717 GGECQRIKLSKEMGKSNQGHTLYLLDEPTTGLHPLDIDRLLKLLRSLIARNNSVFVIEHA 776 Query: 892 LDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLKPML 940 L+VI +D+I+D+GPEGG GG ++ GTP+ +AE + S T ++LK + Sbjct: 777 LEVISQSDYIIDIGPEGGISGGRLVAHGTPQQIAENKNSLTGKYLKEFI 825 Score = 180 bits (458), Expect = 2e-43, Method: Composition-based stats. Identities = 62/129 (48%), Positives = 87/129 (67%), Gaps = 4/129 (3%) Query: 2 DKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYA 61 D IE++GA+ HNLKNI++ +P+ KLI +TG+SGSGKS+ A D L E +R+Y+ES+ Sbjct: 3 DYIEIKGAKEHNLKNISVSLPKYKLIALTGISGSGKSTFAMDILQKECRRQYMESMGLVT 62 Query: 62 RQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCP 121 + KP VD I GLSP+I+I Q+ S+NPRSTVGT TEI YLR+L+A++G C Sbjct: 63 ----DGLNKPLVDSITGLSPSIAIRQRVLSNNPRSTVGTYTEILTYLRILYAKLGVRSCT 118 Query: 122 DHDVPLAAQ 130 + + Sbjct: 119 NCGKKIPPD 127 Score = 112 bits (280), Expect = 7e-23, Method: Composition-based stats. Identities = 46/209 (22%), Positives = 83/209 (39%), Gaps = 36/209 (17%) Query: 610 EKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGA--TI 667 + +++ GA+ +NLK+++++LP +TG+SGSGKST D L +RQ + + Sbjct: 2 QDYIEIKGAKEHNLKNISVSLPKYKLIALTGISGSGKSTFAMDILQKECRRQYMESMGLV 61 Query: 668 AEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVP-------- 719 + + + I I Q + PRS TYT + T +R L+A + Sbjct: 62 TDGLNKPLVDSITGLSPSIAIRQRVLSNNPRSTVGTYTEILTYLRILYAKLGVRSCTNCG 121 Query: 720 -------------------------ESRARGYTPGRFSFNVRGGRCEACQGDGVI-KVEM 753 +++ + G FSFN G C C G G++ +++ Sbjct: 122 KKIPPDYDLDGESELDEATISCPHCQTKHQKLNMGHFSFNKPQGACPTCNGVGIVTTLDL 181 Query: 754 HFLPDIYVPCDQCKGKRYNRETLEIKYKG 782 L D + + + + Y Sbjct: 182 SQLIDEKLTIEGGAVSLWLDPVIRTHYAN 210 Score = 108 bits (269), Expect = 1e-21, Method: Composition-based stats. Identities = 42/121 (34%), Positives = 64/121 (52%), Gaps = 20/121 (16%) Query: 2 DKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYA 61 I VR A HNL+NI++ IP +L+ TG+SGSGKSSL FDT+ ++ ES SA Sbjct: 504 HCIVVRKAHAHNLQNISVEIPLGQLVSFTGVSGSGKSSLVFDTIV-----KFSESGSA-- 556 Query: 62 RQFLSLMEKPDVDHI---EGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEP 118 + D I E + I+++Q RS + T T+++ +R LFA + + Sbjct: 557 ----------ECDSIRGFEHVKEIITLDQSPIGRQSRSNIATYTDLYTPIRELFAALPQA 606 Query: 119 R 119 + Sbjct: 607 K 607 >UniRef50_Q6MKF2 Excinuclease ABC subunit A n=1 Tax=Bdellovibrio bacteriovorus RepID=Q6MKF2_BDEBA Length = 866 Score = 710 bits (1833), Expect = 0.0, Method: Composition-based stats. Identities = 302/540 (55%), Positives = 413/540 (76%), Gaps = 2/540 (0%) Query: 401 ISNRPCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKIL 460 + C C G RL+ EA ++ + + +SD+ ++ L+ + IAEKI+ Sbjct: 328 MVLNDCPDCHGARLKNEALNIRLGGKTIAELSDLGALELRDWVAKLQWKAKDQLIAEKIV 387 Query: 461 KEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLH 520 K+I RL +L+ VG YL+LSR + TLSGGEAQRIRLA+Q+G+ L+G +YV+DEPSIGLH Sbjct: 388 KQILARLDYLIRVGTGYLSLSRPSRTLSGGEAQRIRLATQVGSSLIGCLYVMDEPSIGLH 447 Query: 521 QRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAI 580 RD+ RLL + L++ GNT+++VEHDED IR AD V+D+GP AGV GGE++A+G + + Sbjct: 448 PRDHHRLLDIIGELKERGNTILLVEHDEDTIRYADFVVDLGPRAGVLGGEMMAQGTPDEL 507 Query: 581 MAVPESLTGQYMSGKRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITG 640 A P SLTG+Y++G+ +I +PK+R N + ++LTGA GNNL++V L +P+G FT +TG Sbjct: 508 AANPNSLTGKYLNGEMRIPIPKERRKGNGQ-FVRLTGATGNNLQNVDLEIPLGTFTTVTG 566 Query: 641 VSGSGKSTLINDTLFPIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSN 700 VSGSGKSTLI DTL+ I + A +A+P+PY+ I+GL+ DKVIDI+Q PIGRTPRS Sbjct: 567 VSGSGKSTLIIDTLYKILAQHFYKA-LAQPSPYKKIEGLDKIDKVIDINQRPIGRTPRST 625 Query: 701 PATYTGVFTPVRELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIY 760 PATY G+F +R+LFA +P+S+ RGY PGRFSFNV+GGRCE C G G I++EMHFL D++ Sbjct: 626 PATYVGLFPMIRDLFANLPDSKLRGYEPGRFSFNVKGGRCETCMGHGQIRMEMHFLSDVF 685 Query: 761 VPCDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTY 820 V CD C G+RYNRETL IKYK K+I +VL+M++ EA EFF + RKL+TL VGL Y Sbjct: 686 VTCDTCLGRRYNRETLNIKYKSKSIADVLEMSVGEALEFFRNHTQIYRKLETLHRVGLDY 745 Query: 821 IRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRD 880 + LGQS+TTLSGGEAQRVKL++ELS+RGTG+TLYILDEPTTGLHF D+++L++++ +L D Sbjct: 746 MTLGQSSTTLSGGEAQRVKLSKELSRRGTGKTLYILDEPTTGLHFDDVRKLVELIQELAD 805 Query: 881 QGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLKPML 940 QGNT++VIEHN++V+K++D ++DLGP+GG GGG+I+ +GTPE VA+ AS T +FLKP+L Sbjct: 806 QGNTVLVIEHNMEVVKSSDHVIDLGPDGGKGGGQIVAAGTPEKVAKVAASETGKFLKPLL 865 Score = 413 bits (1062), Expect = e-113, Method: Composition-based stats. Identities = 155/285 (54%), Positives = 208/285 (72%), Gaps = 3/285 (1%) Query: 2 DKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYA 61 D I V+GA+ HNLKN+++ IPR+K+ V TGLSGSGKSSLAFDT+YAEGQRRYVESLSAYA Sbjct: 6 DGIVVKGAKEHNLKNVSVTIPRNKITVFTGLSGSGKSSLAFDTVYAEGQRRYVESLSAYA 65 Query: 62 RQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCP 121 R FL ++KP+VD I GLSPAI+I+QKS S NPRSTVGT+TEI+DYLRLLFA++G P CP Sbjct: 66 RNFLEQLKKPEVDSITGLSPAIAIDQKSVSTNPRSTVGTVTEIYDYLRLLFAKLGIPECP 125 Query: 122 DHDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARIDG 181 H +P+++QT Q+++ V + G + +LAP+ +KGE + A +G+++A++DG Sbjct: 126 THHIPVSSQTPQQIIEEVFKKGVGTKFFVLAPMASGKKGEFLAEFQRWAKKGFVKAKVDG 185 Query: 182 EVCDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVADMDDPK 241 ++ +L KL K H I++VVD+ ++D L RL+ES TAL ++ G ++ +D Sbjct: 186 KMIELDKATKLAKTKTHDIDLVVDQLILKDTLKLRLSESINTALSMANGRVIIETLD--- 242 Query: 242 AEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQ 286 E +S + ACP CGYS E+EPRLFSFNNP GACPTC GLG Sbjct: 243 GERTSYSLHSACPECGYSFPEIEPRLFSFNNPRGACPTCHGLGTI 287 Score = 204 bits (519), Expect = 1e-50, Method: Composition-based stats. Identities = 89/284 (31%), Positives = 132/284 (46%), Gaps = 52/284 (18%) Query: 705 TGVFTPVRELFAGVPESRARGYT-----PGRFSFNVRGGRCEACQGDGVIKV--EMHFLP 757 R ++ GY+ P FSFN G C C G G I + E F Sbjct: 238 IETLDGERTSYSLHSACPECGYSFPEIEPRLFSFNNPRGACPTCHGLGTIDLEEEEQFSD 297 Query: 758 D------------------------------IYVPCDQCKGKRYNRETLEIKYKGKTIHE 787 + C C G R E L I+ GKTI E Sbjct: 298 GEVGGKKLDKVVYKYKGKKTSDDDDEEGEEMVLNDCPDCHGARLKNEALNIRLGGKTIAE 357 Query: 788 VLDMTIEEAREFFDA--------------VPALARKLQTLMDVGLTYIRLGQSATTLSGG 833 + D+ E R++ V + +L L+ VG Y+ L + + TLSGG Sbjct: 358 LSDLGALELRDWVAKLQWKAKDQLIAEKIVKQILARLDYLIRVGTGYLSLSRPSRTLSGG 417 Query: 834 EAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLD 893 EAQR++LA ++ G LY++DEP+ GLH D +LLD++ +L+++GNTI+++EH+ D Sbjct: 418 EAQRIRLATQVGSSLIGC-LYVMDEPSIGLHPRDHHRLLDIIGELKERGNTILLVEHDED 476 Query: 894 VIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLK 937 I+ AD++VDLGP G GGE++ GTP+ +A S T ++L Sbjct: 477 TIRYADFVVDLGPRAGVLGGEMMAQGTPDELAANPNSLTGKYLN 520 Score = 174 bits (441), Expect = 2e-41, Method: Composition-based stats. Identities = 80/291 (27%), Positives = 135/291 (46%), Gaps = 49/291 (16%) Query: 335 PWGSLSANVHKVVLYGSGKENIEFKYMNDRGDTSIRRHPFEGVLHNMERRYKETESSAVR 394 P+ + + + I+ + G+ + + S +R Sbjct: 597 PYKKI--EGLDKI-----DKVIDINQRPIGRTPRSTPATYVGLFPMIRDLFANLPDSKLR 649 Query: 395 -------------------------EELAKFISNR--PCASCEGTRLRREARHVYVENTP 427 F+S+ C +C G R RE ++ ++ Sbjct: 650 GYEPGRFSFNVKGGRCETCMGHGQIRMEMHFLSDVFVTCDTCLGRRYNRETLNIKYKSKS 709 Query: 428 LPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTLSRSAETL 487 + + +MS+G A+EFF N +I +L+ L VGL+Y+TL +S+ TL Sbjct: 710 IADVLEMSVGEALEFFRN--------------HTQIYRKLETLHRVGLDYMTLGQSSTTL 755 Query: 488 SGGEAQRIRLASQIGAGLVG-VMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEH 546 SGGEAQR++L+ ++ G +Y+LDEP+ GLH D +L+ + L D GNTV+V+EH Sbjct: 756 SGGEAQRVKLSKELSRRGTGKTLYILDEPTTGLHFDDVRKLVELIQELADQGNTVLVIEH 815 Query: 547 DEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRK 597 + + ++++DHVID+GP G GG++VA G E + V S TG+++ K Sbjct: 816 NMEVVKSSDHVIDLGPDGGKGGGQIVAAGTPEKVAKVAASETGKFLKPLLK 866 Score = 106 bits (266), Expect = 3e-21, Method: Composition-based stats. Identities = 37/116 (31%), Positives = 57/116 (49%), Gaps = 15/116 (12%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 63 + + GA +NL+N++L IP VTG+SGSGKS+L DTLY A+ Sbjct: 539 VRLTGATGNNLQNVDLEIPLGTFTTVTGVSGSGKSTLIIDTLYK-----------ILAQH 587 Query: 64 FLSLMEKP----DVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARV 115 F + +P ++ ++ + I I Q+ PRST T + +R LFA + Sbjct: 588 FYKALAQPSPYKKIEGLDKIDKVIDINQRPIGRTPRSTPATYVGLFPMIRDLFANL 643 Score = 98.5 bits (244), Expect = 1e-18, Method: Composition-based stats. Identities = 38/118 (32%), Positives = 62/118 (52%), Gaps = 6/118 (5%) Query: 607 ANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGAT 666 ++ E + + GA+ +NLK+V++T+P T TG+SGSGKS+L DT++ QR+ + Sbjct: 2 SHAEDGIVVKGAKEHNLKNVSVTIPRNKITVFTGLSGSGKSSLAFDTVYAEGQRRYVESL 61 Query: 667 IAEPAPYRDIQGLEHFDKV------IDIDQSPIGRTPRSNPATYTGVFTPVRELFAGV 718 A + + D + I IDQ + PRS T T ++ +R LFA + Sbjct: 62 SAYARNFLEQLKKPEVDSITGLSPAIAIDQKSVSTNPRSTVGTVTEIYDYLRLLFAKL 119 >UniRef50_C8VVR7 ABC transporter related n=1 Tax=Desulfotomaculum acetoxidans DSM 771 RepID=C8VVR7_DESAS Length = 823 Score = 708 bits (1827), Expect = 0.0, Method: Composition-based stats. Identities = 277/707 (39%), Positives = 411/707 (58%), Gaps = 21/707 (2%) Query: 238 DDPKAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQN 297 ++ + + F C CGY M +L FS N GAC TC+GLG + + + N Sbjct: 128 EEVEKTDEDFKVFMYCSQCGYRMEKLTRTYFSCNTREGACTTCEGLGKVLDINKEN-VAN 186 Query: 298 PELSLAGGAIRGWDRR-NFYYFQMLKSLADHYKFDVE--APWGSLSANVHKVVLY-GSGK 353 LSL GAI W+++ Y L + HY P S N+ K +LY G Sbjct: 187 ESLSLEDGAIDFWEQKYKEYQISSLYNAFRHYGIPFNDNTPVADFS-NIQKAILYQGVES 245 Query: 354 ENIEFKYMNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGTR 413 E ++ + ++ FEGV + RR + A ++L + + C C G R Sbjct: 246 EEVKKAFSGILPPKTVAGGRFEGVFPTLWRRMSDKGGEA--KQLNDYFNYDICPDCRGER 303 Query: 414 LRREARHVYVENTPLPAISDMSIGHAMEFFNNLK--LAGQRAKIAEKILKEIGDRLKFLV 471 L +R V VE+T LP +S +S+ + L+ L Q K+ E L ++ +++ ++ Sbjct: 304 LGALSRSVTVESTRLPELSLLSLEELYTWIQKLEDSLTDQNYKLVEPYLMDLKTKIQRIL 363 Query: 472 NVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTL 531 NVGL YL+L R TLSGGE QR++LA+ + + L G++Y++DEP+IGLH +D E ++ L Sbjct: 364 NVGLGYLSLDRQTITLSGGELQRVKLAATLDSDLTGIIYIMDEPTIGLHPKDTEGMITIL 423 Query: 532 IHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQY 591 LRDLGNTVIV+EHD D ++AAD+++DIGPG+G HGGE++ G L+ + S+TG Y Sbjct: 424 KKLRDLGNTVIVIEHDPDIMQAADYIVDIGPGSGKHGGEIIGTGTLDELKEQEASVTGTY 483 Query: 592 MSGKRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLIN 651 + RK + +K +K+ A NLK++ ++ P+G +TGVSGSGKSTL+ Sbjct: 484 L---RKEKQDRKEFRKGTGNAIKVENANLYNLKNIGVSFPIGCLNTVTGVSGSGKSTLVF 540 Query: 652 DTLFPIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPV 711 + L ++ + I G+E FD+++ I+QS I + RSN ATY+ V+T V Sbjct: 541 EVLAEARNKKQTSRNV--------ISGMEQFDQIVTIEQSAITKMKRSNIATYSEVYTEV 592 Query: 712 RELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRY 771 R++F + E++ RG + FSFN GGRCE C+G G + M F DI V C C GK++ Sbjct: 593 RKIFGSLKEAKDRGLSAKHFSFNTPGGRCENCEGLGYVTSNMLFFKDIEVTCPVCGGKQF 652 Query: 772 NRETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLS 831 + + L +KYK +I ++L M++EEA F P + R L+ L DVGL Y+ LGQS TTLS Sbjct: 653 SDDVLSVKYKDCSIKDILQMSVEEAFSMFHNHPKIERILKLLEDVGLGYLELGQSLTTLS 712 Query: 832 GGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHN 891 GGE QR+KLA+EL +LY++DEPTTGLH D++ L +L+++ D GNT++V+EHN Sbjct: 713 GGEGQRLKLAKELINNNGKHSLYLMDEPTTGLHPIDVENFLTLLNRMVDSGNTVIVVEHN 772 Query: 892 LDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLKP 938 VIK +DWI DLGPEGG GG+++ +GTP + + TA FL+ Sbjct: 773 QQVIKASDWITDLGPEGGINGGKLVFAGTPSEMLINGETITAEFLRK 819 Score = 182 bits (462), Expect = 6e-44, Method: Composition-based stats. Identities = 62/139 (44%), Positives = 92/139 (66%), Gaps = 6/139 (4%) Query: 1 MDKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAY 60 M I VRGAR NLK+I+L IPR+KLIV TGLSGSGK++LA D ++ E QR+Y+E++ Sbjct: 1 MSNIIVRGAREGNLKDISLEIPREKLIVFTGLSGSGKTTLAIDVIFQECQRQYLEAMG-- 58 Query: 61 ARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRC 120 L + KP +D I +SPA+ I Q ++ NPRSTVGT+T+I+ LR+++ ++G C Sbjct: 59 ----LQGINKPKIDFIHNVSPAVIITQNESNKNPRSTVGTLTDIYTDLRMVYEKLGVRVC 114 Query: 121 PDHDVPLAAQTVSQMVDNV 139 P + ++A + V+ Sbjct: 115 PKCNKVISAAECKEEVEKT 133 Score = 100 bits (249), Expect = 3e-19, Method: Composition-based stats. Identities = 45/173 (26%), Positives = 67/173 (38%), Gaps = 36/173 (20%) Query: 613 LKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAEPAP 672 + + GAR NLKD++L +P TG+SGSGK+TL D +F QRQ A + Sbjct: 4 IIVRGAREGNLKDISLEIPREKLIVFTGLSGSGKTTLAIDVIFQECQRQYLEAMGLQGIN 63 Query: 673 YRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPES----------- 721 I + + + I Q+ + PRS T T ++T +R ++ + Sbjct: 64 KPKIDFIHNVSPAVIITQNESNKNPRSTVGTLTDIYTDLRMVYEKLGVRVCPKCNKVISA 123 Query: 722 -------------------------RARGYTPGRFSFNVRGGRCEACQGDGVI 749 R T FS N R G C C+G G + Sbjct: 124 AECKEEVEKTDEDFKVFMYCSQCGYRMEKLTRTYFSCNTREGACTTCEGLGKV 176 Score = 85.8 bits (211), Expect = 8e-15, Method: Composition-based stats. Identities = 41/119 (34%), Positives = 63/119 (52%), Gaps = 14/119 (11%) Query: 2 DKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYA 61 + I+V A +NLKNI + P L VTG+SGSGKS+L F+ L AE + + S Sbjct: 500 NAIKVENANLYNLKNIGVSFPIGCLNTVTGVSGSGKSTLVFEVL-AEARNKKQTS----- 553 Query: 62 RQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRC 120 R +S ME D I ++IEQ + + RS + T +E++ +R +F + E + Sbjct: 554 RNVISGME--QFDQI------VTIEQSAITKMKRSNIATYSEVYTEVRKIFGSLKEAKD 604 >UniRef50_C6R915 UvrABC system protein A n=2 Tax=Corynebacterium RepID=C6R915_9CORY Length = 806 Score = 707 bits (1825), Expect = 0.0, Method: Composition-based stats. Identities = 255/726 (35%), Positives = 385/726 (53%), Gaps = 24/726 (3%) Query: 220 SFETALELSGGTAVVADMDDPKAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPT 279 + + + G + V + L + G + L FS N P G CP Sbjct: 90 ALQQSTSGGGARSTVGTVSALSNSVRLLYSR-----AGDNPEGLYSDSFSPNTPEGMCPQ 144 Query: 280 CDGLGVQQYFDPDRVIQNPELSLAGGAIRGWDRRNFYYFQMLKSLADHYKFDVEAPWGSL 339 C G GV D ++ +P LS+ GAI+ W + + + + +D+++PW L Sbjct: 145 CHGTGVVHEPTEDSMVPDPTLSIEEGAIQAW--PGAWAGKNFHDILMNLGYDLDSPWQEL 202 Query: 340 SANVHKVVLYGSGKENIEFKYMNDRGD-TSIRRHPFEGVLHNMERRYKETESSAVREELA 398 +L+ + + K + + + V + + ET+S +R+ Sbjct: 203 PQEDRDWILFTEERPVVTVKPLRGKDQIQRNYEGTWRSVASYLNKTLAETQSDTLRKRTL 262 Query: 399 KFISNRPCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEK 458 ++ +R C +C G RL A V P+ + + + E + K + + Sbjct: 263 SYMESRECETCGGRRLNPAALKVTYAGMPIDELGALPLDRVHEVLS--KQNPEENSAEDL 320 Query: 459 ILKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIG 518 +L++I L + +GL +L+L R ++LSGGE QRIRLA+Q+ +GL GV YVLDEPS G Sbjct: 321 LLRQILPALTSALELGLAHLSLDRPTQSLSGGEMQRIRLAAQLRSGLFGVAYVLDEPSAG 380 Query: 519 LHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLE 578 LH + + ++ GN+V++VEHD D + AD ++D+GP AG GG VV GP+E Sbjct: 381 LHPDERDAVMDMCRRFIAAGNSVLLVEHDMDLVAQADWLVDVGPLAGERGGNVVYSGPVE 440 Query: 579 AIMAVPESLTGQYMSGKRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCI 638 A ++ T ++ + + P P L L G ++ ++ + +G FT + Sbjct: 441 DYDA--DTPTANALAHR---TLTLSDDPRTPSSHLALRGINARSIDNLDVDFGLGQFTAV 495 Query: 639 TGVSGSGKSTLINDTLFPIAQRQLNGATIAEPAP-----YRDIQGLEHFDKVIDIDQSPI 693 GVSGSGKSTL++ L + ++ + E +G + +V+ I Q PI Sbjct: 496 AGVSGSGKSTLVSTVLAGLLRQSATAVSDEEETEDKGWSVESTEGFDRVKRVVQITQKPI 555 Query: 694 GRTPRSNPATYTGVFTPVRELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEM 753 GRTPRS ATYTG+F VR+LFA E++ R +T RFS+NV+ G+C C G G I+VE+ Sbjct: 556 GRTPRSTLATYTGLFDNVRKLFASTDEAKQRKWTVSRFSYNVKQGQCPTCGGAGKIEVEL 615 Query: 754 HFLPDIYVPCDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTL 813 FLP Y C +C G R+N ETLE+ ++G+TI ++L++T++EA E F + R + TL Sbjct: 616 VFLPGSYTTCPECGGARFNDETLEVTWQGRTIADILELTVDEAAEVFAEEEKIYRAIATL 675 Query: 814 MDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGT---GQTLYILDEPTTGLHFADIQQ 870 VGL Y+RLGQ A LSGGEAQR+KLA EL + G T+Y+LDEPTTGLH ADI Sbjct: 676 QAVGLGYLRLGQGAPELSGGEAQRIKLATELQRSRNSRRGHTVYLLDEPTTGLHPADIDL 735 Query: 871 LLDVLHKLRDQGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEAS 930 L LHKL D G+T++V+EH+L V+ AD I+++GP G GG I+ TP VA E + Sbjct: 736 LNTELHKLADAGHTVIVVEHDLSVMANADRIIEMGPGAGEDGGRIIADATPAQVAA-EDT 794 Query: 931 HTARFL 936 T R L Sbjct: 795 ATGRAL 800 Score = 179 bits (454), Expect = 5e-43, Method: Composition-based stats. Identities = 65/165 (39%), Positives = 98/165 (59%), Gaps = 19/165 (11%) Query: 1 MDKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAY 60 M I+VR A HNL+N+++ +PR KL+ VTG+SGSGKSSLAF T++ EGQRRY+ES++ + Sbjct: 7 MSTIKVRDAHLHNLRNVDVDMPRGKLVAVTGVSGSGKSSLAFGTIHGEGQRRYLESVAPF 66 Query: 61 ARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGE--- 117 AR+ +S P V +EGL P ++++Q ++ RSTVGT++ + + +RLL++R G+ Sbjct: 67 ARRLISSAVDPQVSQVEGLPPTVALQQSTSGGGARSTVGTVSALSNSVRLLYSRAGDNPE 126 Query: 118 ----------------PRCPDHDVPLAAQTVSQMVDNVLSQPEGK 146 P+C V S + D LS EG Sbjct: 127 GLYSDSFSPNTPEGMCPQCHGTGVVHEPTEDSMVPDPTLSIEEGA 171 Score = 109 bits (272), Expect = 6e-22, Method: Composition-based stats. Identities = 47/183 (25%), Positives = 76/183 (41%), Gaps = 10/183 (5%) Query: 613 LKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAEPAP 672 +K+ A +NL++V + +P G +TGVSGSGKS+L T+ QR+ + Sbjct: 10 IKVRDAHLHNLRNVDVDMPRGKLVAVTGVSGSGKSSLAFGTIHGEGQRRYLESVAPFARR 69 Query: 673 YRD------IQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESRARGY 726 + +E + + QS G RS T + + VR L++ ++ Y Sbjct: 70 LISSAVDPQVSQVEGLPPTVALQQSTSGGGARSTVGTVSALSNSVRLLYSRAGDNPEGLY 129 Query: 727 TPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKYKGKTIH 786 + FS N G C C G GV+ D VP + + + GK H Sbjct: 130 SDS-FSPNTPEGMCPQCHGTGVVH---EPTEDSMVPDPTLSIEEGAIQAWPGAWAGKNFH 185 Query: 787 EVL 789 ++L Sbjct: 186 DIL 188 Score = 81.9 bits (201), Expect = 1e-13, Method: Composition-based stats. Identities = 33/139 (23%), Positives = 55/139 (39%), Gaps = 18/139 (12%) Query: 3 KIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYAR 62 + +RG ++ N+++ + V G+SGSGKS+L T+ A R+ ++S Sbjct: 469 HLALRGINARSIDNLDVDFGLGQFTAVAGVSGSGKSTLV-STVLAGLLRQSATAVSDEEE 527 Query: 63 QFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPR--- 119 + + + + I QK PRST+ T T + D +R LFA E + Sbjct: 528 TEDKGWSVESTEGFDRVKRVVQITQKPIGRTPRSTLATYTGLFDNVRKLFASTDEAKQRK 587 Query: 120 --------------CPDHD 124 CP Sbjct: 588 WTVSRFSYNVKQGQCPTCG 606 >UniRef50_A1TP16 Excinuclease ABC, A subunit n=4 Tax=Bacteria RepID=A1TP16_ACIAC Length = 944 Score = 704 bits (1816), Expect = 0.0, Method: Composition-based stats. Identities = 283/790 (35%), Positives = 396/790 (50%), Gaps = 98/790 (12%) Query: 244 ELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPELSLA 303 LL+S P L FS N P GACP C G+G ++ + L++ Sbjct: 154 RLLYSRAGQYPA---RQPMLYAEDFSPNTPEGACPHCHGMGRVYEVTERSLVPDDRLTIR 210 Query: 304 GGAIRGWDRRNFYYFQMLKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKENIEF----- 358 A+ W + Q L+ + DV+ PW L +L+ + + Sbjct: 211 ERAVAAWPT--AWGGQNLRDILVMLGHDVDVPWRDLPRKTRDWILFTDEQPVVPVYAGLD 268 Query: 359 ----KYMNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGTRL 414 + G F ++ + ++S+ +RE A F+ PC +C G RL Sbjct: 269 RKAAQAARKAGTPPSYMGTFSSARRHVLHSFAHSQSARMRERAAAFLVGSPCPACGGKRL 328 Query: 415 RREARHVYVENTPLPAISDMSIGHAMEFFNNL---------------------------- 446 + EA V + + + +G + Sbjct: 329 KPEALSVTFAGHDIAELGRLPLGELARLLQPVAEGRLGDSLRPSGGPRAPVARPGADSHR 388 Query: 447 ------------------------KLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTLSR 482 L+ ++ A+++ +EIG R+ L +GL+YLTL R Sbjct: 389 AHIARRVAAGGSAHAAAPDVRRTPDLSEEKVLAAQRLAQEIGARIAALSQLGLHYLTLDR 448 Query: 483 SAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVI 542 S +LS GE QR+RLA+Q+G+ L GV+YVLDEPS GLH D E L L L+ GN++ Sbjct: 449 STPSLSSGELQRLRLATQLGSQLFGVVYVLDEPSAGLHPADGEALRAALHRLKRAGNSLF 508 Query: 543 VVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEVPK 602 VVEHD +RAAD ++D+GPGAG+HGGEV+ GP + + AV S T +Y+ R P Sbjct: 509 VVEHDLATMRAADWLVDVGPGAGMHGGEVLYSGPPDGLAAVQPSRTRRYLFPGRDGPAPV 568 Query: 603 KRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQL 662 +R P L+L G +NLK V PVG T +TGVSGSGKS+L++ L + + L Sbjct: 569 QRTPREAAGWLRLEGIGRHNLKGVDAAFPVGCLTAVTGVSGSGKSSLVSRALVELVAQAL 628 Query: 663 NG---------ATIAEPAP-----------------------YRDIQGLEHFDKVIDIDQ 690 ++ + +P I L +++ +DQ Sbjct: 629 GSPLADAREDEESVPDGSPGGPPHAAPQDDDPGAADDPGGATSGRIAELAGIRRLVRVDQ 688 Query: 691 SPIGRTPRSNPATYTGVFTPVRELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIK 750 PIGRTPRSN ATYTG+F VR+LFA P +R R Y PGRFSFNV GRC C+G+G + Sbjct: 689 KPIGRTPRSNLATYTGLFDGVRKLFAATPAARRRRYGPGRFSFNVAAGRCPTCEGEGSVS 748 Query: 751 VEMHFLPDIYVPCDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKL 810 VE+ FLP +Y PC C G RYN TLE+++ G I +VL +T++ A E F A+ R L Sbjct: 749 VELLFLPSVYAPCPDCHGARYNPATLEVRWNGLDIADVLRLTVDAACEAFAREAAVLRPL 808 Query: 811 QTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQ 870 L ++GL Y+RLGQ AT LSGGEAQR+KLA EL + G TLY+LDEPTTGLH AD+ + Sbjct: 809 ALLREIGLGYLRLGQPATELSGGEAQRIKLATELQRPQRGDTLYVLDEPTTGLHPADVDR 868 Query: 871 LLDVLHKLRDQGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEAS 930 LL L L GNT+VV+EH++ V+ DW++D+GP G GG I+ +GTP VA S Sbjct: 869 LLVQLDGLAAAGNTVVVVEHDMRVVAACDWVIDMGPGAGGDGGRIVAAGTPSEVARQAGS 928 Query: 931 HTARFLKPML 940 TA +L L Sbjct: 929 RTAPYLARAL 938 Score = 183 bits (466), Expect = 2e-44, Method: Composition-based stats. Identities = 62/114 (54%), Positives = 87/114 (76%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 63 + VRGAR HNL+N+++ IPRD L+V TG+SGSGKSSLAF TLYAE QRRY+ES++ YAR+ Sbjct: 49 VRVRGAREHNLRNVDVDIPRDALVVFTGVSGSGKSSLAFGTLYAEAQRRYLESVAPYARR 108 Query: 64 FLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGE 117 + P+VD I+GL PA++++Q+ + RS+VG+ T I LRLL++R G+ Sbjct: 109 LIDQAGTPEVDAIDGLPPAVALQQQRGTPTARSSVGSATTISSLLRLLYSRAGQ 162 Score = 107 bits (268), Expect = 2e-21, Method: Composition-based stats. Identities = 49/190 (25%), Positives = 80/190 (42%), Gaps = 11/190 (5%) Query: 610 EKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAE 669 + +++ GAR +NL++V + +P TGVSGSGKS+L TL+ AQR+ + Sbjct: 46 DGFVRVRGAREHNLRNVDVDIPRDALVVFTGVSGSGKSSLAFGTLYAEAQRRYLESVAPY 105 Query: 670 PAPYRDIQGLEHFDKV------IDIDQSPIGRTPRSNPATYTGVFTPVRELF--AGVPES 721 D G D + + + Q T RS+ + T + + +R L+ AG + Sbjct: 106 ARRLIDQAGTPEVDAIDGLPPAVALQQQRGTPTARSSVGSATTISSLLRLLYSRAGQYPA 165 Query: 722 RARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKYK 781 R FS N G C C G G + VP D+ + + Sbjct: 166 RQPMLYAEDFSPNTPEGACPHCHGMGRVY---EVTERSLVPDDRLTIRERAVAAWPTAWG 222 Query: 782 GKTIHEVLDM 791 G+ + ++L M Sbjct: 223 GQNLRDILVM 232 Score = 76.1 bits (186), Expect = 6e-12, Method: Composition-based stats. Identities = 37/143 (25%), Positives = 52/143 (36%), Gaps = 42/143 (29%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESL-----S 58 + + G HNLK ++ P L VTG+SGSGKSSL R VE + S Sbjct: 579 LRLEGIGRHNLKGVDAAFPVGCLTAVTGVSGSGKSSLV--------SRALVELVAQALGS 630 Query: 59 AYARQFLSLMEKPD-----------------------------VDHIEGLSPAISIEQKS 89 A PD + + G+ + ++QK Sbjct: 631 PLADAREDEESVPDGSPGGPPHAAPQDDDPGAADDPGGATSGRIAELAGIRRLVRVDQKP 690 Query: 90 TSHNPRSTVGTITEIHDYLRLLF 112 PRS + T T + D +R LF Sbjct: 691 IGRTPRSNLATYTGLFDGVRKLF 713 >UniRef50_C3RJK4 Excinuclease ABC subunit A n=2 Tax=Bacteria RepID=C3RJK4_9MOLU Length = 798 Score = 697 bits (1798), Expect = 0.0, Method: Composition-based stats. Identities = 261/695 (37%), Positives = 390/695 (56%), Gaps = 38/695 (5%) Query: 247 FSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPELSLAGGA 306 F+ C C Y M +L FSFN+ GACPTC GLG + D+V+ P LSL GA Sbjct: 137 FTVYMYCNYCHYKMEKLTRSHFSFNSEKGACPTCFGLGKTLILNLDKVL-EPNLSLREGA 195 Query: 307 IRGWDRR-NFYYFQMLKSLADHYKFDV--EAPWGSLSANVHKVVLYGSGKENIEFKYMND 363 + W R Y + L+ + V E + ++LYG+ + + + Sbjct: 196 VAFWHHRYKEYQIEQLEKVYRELGLSVTPETKVIDFNQQQRVILLYGTESKQFKELF--- 252 Query: 364 RGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGTRLRREARHVYV 423 I+ FEG++ N+ RR +E ++ + +E++ + + C C G +L +R + V Sbjct: 253 ---GKIKISKFEGIITNLWRRVEEKKNQS--KEISSYFDEQVCPDCHGEKLNSLSRQITV 307 Query: 424 ENTPLPAISDMSIGHAMEFFNNLK--LAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTLS 481 T + A + M + + + L+ ++G + + ++ + ++ +++ ++NVGL YL L Sbjct: 308 NKTVITATTKMPLTELLHWLEQLEATVSGPQKEAVQQYIIDLKTKIQRIINVGLGYLHLD 367 Query: 482 RSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTV 541 R TLSGGE QRI+LA+ + + L G++Y+ DEP++GLH +D ++ L LRD NTV Sbjct: 368 RQTMTLSGGEKQRIKLAAALQSQLTGIIYIFDEPTMGLHPKDTAGIINVLKELRDQENTV 427 Query: 542 IVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEVP 601 IV+EHD D I+AAD++ID+GPGAG HGG+++A G + P S+TGQY K+K Sbjct: 428 IVIEHDLDVIKAADYLIDLGPGAGKHGGQILALGTYHELQNNPSSITGQYFVNKKKC--- 484 Query: 602 KKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQ 661 KRV + ++ A +NLK++ +T V +TGVSGSGKSTL+ L Sbjct: 485 -KRVYRTSNRYFEVKNAHVHNLKNIDVTFLVDCLNVVTGVSGSGKSTLVFAVLAK----- 538 Query: 662 LNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPES 721 Q +FD +I + Q I T RSN ATYTG++ +R+LF + + Sbjct: 539 ---------------QHYRYFDDIIAVRQESITTTRRSNIATYTGIYDEIRKLFGSLEAT 583 Query: 722 RARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKYK 781 + G+T FSFN +GGRCE C+G G + M F D+ V C C+GKR+ E L +KY Sbjct: 584 KEMGFTAKHFSFNSQGGRCENCEGLGTVTSNMLFFKDVEVVCPVCQGKRFIPEILALKYH 643 Query: 782 GKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLA 841 +I +VL ++++E FF P + + L+ L DVGL Y+ LGQ TTLSGGE QR+KLA Sbjct: 644 EHSIDDVLHLSVDEGVGFFSDCPKIIKTLKMLQDVGLGYLELGQVLTTLSGGEKQRLKLA 703 Query: 842 RELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADWI 901 L LY++DEPT GLH DI+ LL +L ++ D GNT+V++EHN +I ADWI Sbjct: 704 TTLLTNINKHNLYLIDEPTIGLHPLDIEHLLLLLDRIVDSGNTVVIVEHNQQIINAADWI 763 Query: 902 VDLGPEGGSGGGEILVSGTPETVAECEASHTARFL 936 VDLGP GG+ GG ++ +GTP + E S FL Sbjct: 764 VDLGPAGGNDGGYVIAAGTPNDIKGNENSIIGEFL 798 Score = 169 bits (428), Expect = 5e-40, Method: Composition-based stats. Identities = 56/136 (41%), Positives = 89/136 (65%), Gaps = 6/136 (4%) Query: 1 MDKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAY 60 M I ++ A NLKN++L IPR+KL+V+TGLSGSGKS+LA D LY E QR+Y+E++S Sbjct: 1 MKDIIIKNAYHGNLKNLDLTIPRNKLVVITGLSGSGKSTLAIDVLYQECQRQYLEAIS-- 58 Query: 61 ARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRC 120 + KP V+ I +SPA+ I Q ++NPRS++GT+T+I+ +R+++ ++G +C Sbjct: 59 ----FQGINKPGVEVIRNVSPAVVITQDEKNNNPRSSLGTVTDIYTDIRMIYEKLGVRKC 114 Query: 121 PDHDVPLAAQTVSQMV 136 P + A + + Sbjct: 115 PHCGKMIDASYCHEEL 130 Score = 107 bits (268), Expect = 2e-21, Method: Composition-based stats. Identities = 43/171 (25%), Positives = 64/171 (37%), Gaps = 36/171 (21%) Query: 613 LKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAEPAP 672 + + A NLK++ LT+P ITG+SGSGKSTL D L+ QRQ A + Sbjct: 4 IIIKNAYHGNLKNLDLTIPRNKLVVITGLSGSGKSTLAIDVLYQECQRQYLEAISFQGIN 63 Query: 673 YRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPES----------- 721 ++ + + + I Q PRS+ T T ++T +R ++ + Sbjct: 64 KPGVEVIRNVSPAVVITQDEKNNNPRSSLGTVTDIYTDIRMIYEKLGVRKCPHCGKMIDA 123 Query: 722 -------------------------RARGYTPGRFSFNVRGGRCEACQGDG 747 + T FSFN G C C G G Sbjct: 124 SYCHEELVRADNDFTVYMYCNYCHYKMEKLTRSHFSFNSEKGACPTCFGLG 174 Score = 90.8 bits (224), Expect = 3e-16, Method: Composition-based stats. Identities = 39/108 (36%), Positives = 53/108 (49%), Gaps = 26/108 (24%) Query: 5 EVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQF 64 EV+ A HNLKNI++ D L VVTG+SGSGKS+L F L + R + Sbjct: 496 EVKNAHVHNLKNIDVTFLVDCLNVVTGVSGSGKSTLVFAVLAKQHYRYF----------- 544 Query: 65 LSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLF 112 D I I++ Q+S + RS + T T I+D +R LF Sbjct: 545 ---------DDI------IAVRQESITTTRRSNIATYTGIYDEIRKLF 577 >UniRef50_B5YKV1 Excinuclease ABC, A subunit n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YKV1_THEYD Length = 833 Score = 695 bits (1795), Expect = 0.0, Method: Composition-based stats. Identities = 297/540 (55%), Positives = 394/540 (72%), Gaps = 3/540 (0%) Query: 401 ISNRPCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKIL 460 +S PC CEGTRLR E+ + + + +S SI F LK + A IAE+IL Sbjct: 295 LSLIPCKLCEGTRLREESLAIKINGKNIAELSTFSIDELKNFLYGLKFSSYNAPIAERIL 354 Query: 461 KEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLH 520 KEI ++ FL +G+ YL+L+R + +LSGGEAQRIRLA+Q+G+ L GV+YVLDEPSIGLH Sbjct: 355 KEIFIKIDFLQKIGVGYLSLNRPSFSLSGGEAQRIRLATQLGSHLSGVLYVLDEPSIGLH 414 Query: 521 QRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAI 580 RD +L+ ++ L GNT+IVVEHDE I AD V+++GPG G GG + P + + Sbjct: 415 PRDCLKLIESMKELSIRGNTLIVVEHDESTIMNADLVVELGPGGGRDGGYLTGVYPPDKL 474 Query: 581 MAVPESLTGQYMSGKRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITG 640 + S+T QY++G KI +P++R + +K +K+ GA+ NLK++ + +P+G+F C+TG Sbjct: 475 LKSRNSITAQYLTGSSKISIPEERRKS--QKFIKIIGAQAYNLKNINVEIPLGVFVCVTG 532 Query: 641 VSGSGKSTLINDTLFPIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSN 700 V+GSGKSTLI + L+ ++L A + P Y+ I+G+E DKV+ +DQSPIGRT RS Sbjct: 533 VAGSGKSTLIFEILYKALVKKLYNANV-YPGNYKAIEGIEQIDKVVCVDQSPIGRTSRST 591 Query: 701 PATYTGVFTPVRELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIY 760 PATYT V T +RELF+ +P++R RGY+ RFSFN+ GGRCE+CQGDG+ K++MH LPD+Y Sbjct: 592 PATYTQVMTEIRELFSLLPDARVRGYSKSRFSFNLLGGRCESCQGDGIKKIKMHLLPDVY 651 Query: 761 VPCDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTY 820 V CD CKGKRYN ETL+IKYKGK I EVL MT+ EA EFF AVP L +KLQ + D+GL Y Sbjct: 652 VVCDNCKGKRYNEETLQIKYKGKNISEVLQMTVSEALEFFSAVPKLNQKLQIMEDIGLGY 711 Query: 821 IRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRD 880 I LGQ ATTLSGGEAQRVKLA+ELSK+ TG+TLYILDEPTTGLH DI++LL++L +L D Sbjct: 712 ITLGQPATTLSGGEAQRVKLAKELSKKPTGKTLYILDEPTTGLHMVDIERLLNILQRLVD 771 Query: 881 QGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLKPML 940 GNT++VIEH+L++IK AD+I+DLGPEGGS GG ++ GTPE VA S+T +FLK L Sbjct: 772 MGNTVIVIEHDLEIIKCADYIIDLGPEGGSSGGYLIAKGTPEEVALNPNSYTGKFLKEKL 831 Score = 390 bits (1002), Expect = e-106, Method: Composition-based stats. Identities = 136/283 (48%), Positives = 202/283 (71%), Gaps = 3/283 (1%) Query: 3 KIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYAR 62 I ++ AR HNLKNI+L++PR+K+IV+TG SGSGKSSLA DT++AE RRY++SL R Sbjct: 4 NIVIKKARQHNLKNIDLILPRNKIIVITGPSGSGKSSLAMDTIFAEAHRRYLQSLPIELR 63 Query: 63 QFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCPD 122 ++KPDVD IEGLSP IS++QK+ S +PRSTVGTITEI+DYLRLL+A++G P CP Sbjct: 64 TIFDQLQKPDVDFIEGLSPGISVDQKTISKSPRSTVGTITEIYDYLRLLYAKIGIPYCPR 123 Query: 123 HDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARIDGE 182 L +Q +++M+D +LS EG ++ +LAP++ E+KGEH + + ++G+IRARIDG Sbjct: 124 CGRRLISQDINKMLDFILSLTEGTKIQILAPVVIEKKGEHKEIFDRAKAEGFIRARIDGN 183 Query: 183 VCDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVADMDDPKA 242 + +L+ L+ +HTIE++VDR V++ ++ + E A++ + T VV +++ Sbjct: 184 IVELTQEFSLKKHVRHTIELIVDRIIVKEKYKNQIKRALELAMKYTQ-TVVVNIVNE--N 240 Query: 243 EELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGV 285 +++FS+ ACP CG S+ +++PRLFSFN+ GACP C GLG Sbjct: 241 RDIIFSSVLACPNCGISLPDIDPRLFSFNSKYGACPRCKGLGY 283 Score = 178 bits (453), Expect = 6e-43, Method: Composition-based stats. Identities = 81/226 (35%), Positives = 123/226 (54%), Gaps = 17/226 (7%) Query: 727 TPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDI--YVPCDQCKGKRYNRETLEIKYKGKT 784 P FSFN + G C C+G G +E D+ +PC C+G R E+L IK GK Sbjct: 262 DPRLFSFNSKYGACPRCKGLGYENIEEEEEIDVLSLIPCKLCEGTRLREESLAIKINGKN 321 Query: 785 IHEVLDMTIEEAREFF-------DAVPALARKLQT-------LMDVGLTYIRLGQSATTL 830 I E+ +I+E + F P R L+ L +G+ Y+ L + + +L Sbjct: 322 IAELSTFSIDELKNFLYGLKFSSYNAPIAERILKEIFIKIDFLQKIGVGYLSLNRPSFSL 381 Query: 831 SGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEH 890 SGGEAQR++LA +L +G LY+LDEP+ GLH D +L++ + +L +GNT++V+EH Sbjct: 382 SGGEAQRIRLATQLGSHLSG-VLYVLDEPSIGLHPRDCLKLIESMKELSIRGNTLIVVEH 440 Query: 891 NLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFL 936 + I AD +V+LGP GG GG + P+ + + S TA++L Sbjct: 441 DESTIMNADLVVELGPGGGRDGGYLTGVYPPDKLLKSRNSITAQYL 486 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 37/113 (32%), Positives = 62/113 (54%), Gaps = 9/113 (7%) Query: 2 DKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLY-AEGQRRYVESLSAY 60 I++ GA+ +NLKNIN+ IP + VTG++GSGKS+L F+ LY A ++ Y ++ Y Sbjct: 503 KFIKIIGAQAYNLKNINVEIPLGVFVCVTGVAGSGKSTLIFEILYKALVKKLYNANV--Y 560 Query: 61 ARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFA 113 + ++ IE + + ++Q RST T T++ +R LF+ Sbjct: 561 PGNY------KAIEGIEQIDKVVCVDQSPIGRTSRSTPATYTQVMTEIRELFS 607 Score = 98.9 bits (245), Expect = 1e-18, Method: Composition-based stats. Identities = 44/152 (28%), Positives = 69/152 (45%), Gaps = 24/152 (15%) Query: 613 LKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGA------T 666 + + AR +NLK++ L LP ITG SGSGKS+L DT+F A R+ + T Sbjct: 5 IVIKKARQHNLKNIDLILPRNKIIVITGPSGSGKSSLAMDTIFAEAHRRYLQSLPIELRT 64 Query: 667 IAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESRARGY 726 I + D+ +E I +DQ I ++PRS T T ++ +R L+A + Sbjct: 65 IFDQLQKPDVDFIEGLSPGISVDQKTISKSPRSTVGTITEIYDYLRLLYAKIGIP----- 119 Query: 727 TPGRFSFNVRGGRCEACQGDGVIKVEMHFLPD 758 C C G +I +++ + D Sbjct: 120 ------------YCPRC-GRRLISQDINKMLD 138 >UniRef50_C3PKK6 Excinuclease ABC, subunit A n=10 Tax=Actinomycetales RepID=C3PKK6_CORA7 Length = 793 Score = 693 bits (1788), Expect = 0.0, Method: Composition-based stats. Identities = 249/696 (35%), Positives = 363/696 (52%), Gaps = 31/696 (4%) Query: 248 SANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPELSLAGGAI 307 S CG + L FS N P G CP C G GV ++ +P LS+ GAI Sbjct: 116 SVRLLYSRCGDNPEGLYSDSFSPNTPEGMCPECQGTGVVHEPTEASMVPDPSLSIEEGAI 175 Query: 308 RGWDRRNFYYFQMLKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKENIEFKYMNDRGD- 366 W + + + +D+++PW L + +L+ + + K Sbjct: 176 AAW--PGAWAGKNFHDILQELGYDLDSPWEDLPKKDREWILFTEERPVVTVKPRRGADQI 233 Query: 367 TSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGTRLRREARHVYVENT 426 + V + + Y ET+S +R + F+ R C +C+G RL +A V Sbjct: 234 QRNYEGTWRSVASYLTKTYAETKSDTLRARVLSFMETRRCDTCQGRRLTAKALKVTYAGL 293 Query: 427 PLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTLSRSAET 486 P+ + + + A E N + Q + +LK + + + +GL +L+L R +T Sbjct: 294 PIDEFNALPLSEAYELLNG--QSPQPNDAEDLLLKALLPAFESALELGLGHLSLDRPTDT 351 Query: 487 LSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEH 546 LSGGE QR+RLA+Q+ +GL GV YVLDEPS GLH + +L GN+V++VEH Sbjct: 352 LSGGEVQRLRLAAQLRSGLYGVTYVLDEPSAGLHPVERGAVLDVCRRFIAEGNSVLLVEH 411 Query: 547 DEDAIRAADHVIDIGPGAGVHGGEVVAEGPLE---AIMAVPESLTGQYMSGKRKIEVPKK 603 D + ++ AD ++D+GP AG GG+VV GP+ ++ T + ++ R K Sbjct: 412 DMELVKQADWLVDVGPLAGERGGQVVYSGPVADYIEAADSADTPTARALARPRPTP---K 468 Query: 604 RVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLN 663 + L + + + + +G FT ITG+SGSGKSTL+ L Sbjct: 469 ADARPAHGEIPLRQVHSHTIDGLDVDFGLGQFTAITGLSGSGKSTLL-----AALHDMLT 523 Query: 664 GATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESRA 723 G E +V+ I Q PIGRTPRS ATYT +F VR+LFA PE++ Sbjct: 524 GPVCP-----------EQVKRVVSITQKPIGRTPRSTVATYTNLFDNVRKLFAATPEAKK 572 Query: 724 RGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKYKGK 783 + +T RFS+NV+ +C C G G I+VE+ FLP Y C C+G+RYN +TL I+++G+ Sbjct: 573 KKWTVSRFSYNVKQSQCHTCGGAGQIEVELVFLPGSYTQCPDCQGQRYNDDTLSIRWQGR 632 Query: 784 TIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARE 843 TI ++LD+T+EEA E F + LQTL VGL Y+RLGQ A LSGGEAQR+KLA E Sbjct: 633 TIADILDLTVEEALEVFADEAPILHALQTLEAVGLGYLRLGQGAPELSGGEAQRIKLATE 692 Query: 844 LSKRGT---GQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADW 900 L + G T+Y+LDEPT GLH ADI L+ LH L D +++VV +H+ +I AD Sbjct: 693 LQRSRNSRRGHTVYLLDEPTVGLHPADIDLLITELHSLVDASHSVVVADHDRHLIAGADR 752 Query: 901 IVDLGPEGGSGGGEILVSGTPETVAECEASHTARFL 936 ++++GP G GG+I+ GTP VA E T R L Sbjct: 753 VIEMGPGSGVEGGQIVADGTPAQVAAGETP-TGRVL 787 Score = 162 bits (409), Expect = 9e-38, Method: Composition-based stats. Identities = 72/192 (37%), Positives = 107/192 (55%), Gaps = 27/192 (14%) Query: 3 KIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYAR 62 I VR A HNL+N+++ +PR +L+ VTG+SGSGKSSLAF T++ EGQRRY+ES++ +AR Sbjct: 12 TISVRDAHLHNLRNVDVDLPRGQLVAVTGVSGSGKSSLAFGTIHGEGQRRYLESVAPFAR 71 Query: 63 QFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGE----- 117 + ++ P V IEGL P ++++Q +++ + RSTVGTI+ + + +RLL++R G+ Sbjct: 72 RLIASAVDPQVGRIEGLPPTVALQQSASASSARSTVGTISAMSNSVRLLYSRCGDNPEGL 131 Query: 118 --------------PRCPDHDVPLAAQTVSQMVDNVLSQPEGKRLMLLA-PIIKERKGEH 162 P C V S + D LS EG + A P K H Sbjct: 132 YSDSFSPNTPEGMCPECQGTGVVHEPTEASMVPDPSLSIEEGA---IAAWPGAWAGKNFH 188 Query: 163 TKTLENLASQGY 174 L+ L GY Sbjct: 189 -DILQEL---GY 196 Score = 98.1 bits (243), Expect = 2e-18, Method: Composition-based stats. Identities = 46/186 (24%), Positives = 78/186 (41%), Gaps = 14/186 (7%) Query: 613 LKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAEPAP 672 + + A +NL++V + LP G +TGVSGSGKS+L T+ QR+ + Sbjct: 13 ISVRDAHLHNLRNVDVDLPRGQLVAVTGVSGSGKSSLAFGTIHGEGQRRYLESVAPFARR 72 Query: 673 YRDIQGLEHFDKV------IDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESRARGY 726 ++ + + QS + RS T + + VR L++ ++ Y Sbjct: 73 LIASAVDPQVGRIEGLPPTVALQQSASASSARSTVGTISAMSNSVRLLYSRCGDNPEGLY 132 Query: 727 TPGRFSFNVRGGRCEACQGDGVIK--VEMHFLPDIYVPCDQCKGKRYNRETLEIKYKGKT 784 + FS N G C CQG GV+ E +PD + ++ + + GK Sbjct: 133 SDS-FSPNTPEGMCPECQGTGVVHEPTEASMVPDPSLSIEEGAIAAWPGA-----WAGKN 186 Query: 785 IHEVLD 790 H++L Sbjct: 187 FHDILQ 192 Score = 78.1 bits (191), Expect = 2e-12, Method: Composition-based stats. Identities = 51/257 (19%), Positives = 89/257 (34%), Gaps = 46/257 (17%) Query: 3 KIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYAR 62 +I +R +H + +++ + +TGLSGSGKS+L L+A Sbjct: 477 EIPLRQVHSHTIDGLDVDFGLGQFTAITGLSGSGKSTL----------------LAALHD 520 Query: 63 QFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCPD 122 + V + +SI QK PRSTV T T + D +R LFA E + Sbjct: 521 MLTGPVCPEQVKRV------VSITQKPIGRTPRSTVATYTNLFDNVRKLFAATPEAKKKK 574 Query: 123 HDVPLAAQTVSQMVDNVLSQPEGKRLMLLA------PIIKERKGEHTKTLENLASQGYIR 176 V + V Q + + L+ + + ++ QG Sbjct: 575 WTVSRFSYNVKQSQCHTCGGAGQIEVELVFLPGSYTQCPDCQGQRYNDDTLSIRWQG--- 631 Query: 177 ARIDGEVCDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETA-LELSGGTAVVA 235 ++D L+L + +EV D + L E+ L L G Sbjct: 632 -------RTIADI--LDLTVEEALEVFADEAPILHALQT--LEAVGLGYLRLGQG---AP 677 Query: 236 DMDDPKAEELLFSANFA 252 ++ +A+ + + Sbjct: 678 ELSGGEAQRIKLATELQ 694 >UniRef50_Q5WJS0 Excinuclease ABC subunit A n=38 Tax=cellular organisms RepID=Q5WJS0_BACSK Length = 751 Score = 690 bits (1781), Expect = 0.0, Method: Composition-based stats. Identities = 281/717 (39%), Positives = 404/717 (56%), Gaps = 64/717 (8%) Query: 226 ELSGGTAVVA-DMDDPKAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLG 284 L GG+ + D L + P G E +FSFN+P G CP C+G+G Sbjct: 94 RLGGGSHSTMGTITDISPILRLLFSRAGQPYVG------ESNMFSFNDPQGMCPECNGIG 147 Query: 285 VQQYFDPDRVIQNPELSLAGGAIRGWDRRNFYYFQMLKSLADHYKFDVEAPWGSLSANVH 344 + D D+ + + SL GAI+ D + + L + FD + S Sbjct: 148 RKLNVDMDKAV-DLSKSLNEGAIKLPDYKVDGWDWSL--VVQAGPFDPDKKLSHYSDEEL 204 Query: 345 KVVLYGSGKENIEFKYMNDRGDTSIRRHPFEGVLHNMERRY----KETESSAVREELAKF 400 + +LY S + ++ + + ++ EGV+ +Y +T+S ++ +A F Sbjct: 205 EKLLY-SKAKKVKMDFAGKATNVTV-----EGVIEKFTNKYIKQDLKTKSERTQKAVAPF 258 Query: 401 ISNRPCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKIL 460 I+ C++C G+RL + A + + +S M +G + + + +A +A I+ Sbjct: 259 ITEGTCSTCHGSRLSQAALSCKMNGFNIAEMSSMEVGQLIRIIHEVDIA-----VAAPIV 313 Query: 461 KEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLH 520 K + +RL+ LV++GL+YLTL R +TLSGGE+QR+++ + LV V Y+ DEPS+GLH Sbjct: 314 KSLSERLQHLVDIGLDYLTLDRETDTLSGGESQRVKMVKHLSGSLVDVTYIFDEPSVGLH 373 Query: 521 QRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAI 580 RD RL L LRD GNTVIVVEHD D I+ ADH++D+GP AG HGG +V EG + + Sbjct: 374 PRDVHRLNELLQKLRDKGNTVIVVEHDPDVIKVADHIVDVGPHAGSHGGTIVYEGSFQGL 433 Query: 581 MAVPESLTGQYMSGKRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITG 640 + +LTG +M ++ K P L + A +NL+DV +T+P G+ T +TG Sbjct: 434 LE-SGTLTGTHMKRPLEL----KHDTRQPSGKLSIKNATLHNLQDVNVTIPTGVLTVVTG 488 Query: 641 VSGSGKSTLINDTLFPIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSN 700 V+GSGKSTLIND L I IDQS +G + RSN Sbjct: 489 VAGSGKSTLINDVF------------------------LSQNPGAIVIDQSAVGVSTRSN 524 Query: 701 PATYTGVFTPVRELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIY 760 PATYTG+ VR+ FA A G FSFN +G CE CQG GV+ ++ FL + Sbjct: 525 PATYTGIMDDVRKAFAS-----ANKVNKGLFSFNSKGA-CENCQGLGVVYTDLAFLESVK 578 Query: 761 VPCDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTY 820 +PC+ C+G+R+ E L K GK+I EVL+MT+E A EFF+ + RKLQ + DVGL Y Sbjct: 579 LPCEVCRGRRFKEEVLAYKLNGKSIAEVLEMTVERALEFFEQ-KEIVRKLQAMSDVGLDY 637 Query: 821 IRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRD 880 I LGQ +TLSGGE QR+KLA EL K+G ++Y++DEPTTGLH +DI LL ++++L D Sbjct: 638 ITLGQPLSTLSGGECQRIKLASELHKQG---SIYVMDEPTTGLHMSDIGLLLTIMNRLVD 694 Query: 881 QGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLK 937 GNT++VIEHNLDVI ADWI+D+GP+GGS GGE++ GTP + E S T ++L Sbjct: 695 AGNTVIVIEHNLDVISQADWIIDMGPDGGSNGGEVVFEGTPSQIIHAEQSITGKYLA 751 Score = 182 bits (461), Expect = 8e-44, Method: Composition-based stats. Identities = 72/201 (35%), Positives = 103/201 (51%), Gaps = 33/201 (16%) Query: 2 DKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYA 61 + I + GAR +NL+N++L IP+ K+ + TG+SGSGKSS+ FDT+ AE R E+ S + Sbjct: 7 EYIVISGARENNLQNVSLRIPKRKITIFTGVSGSGKSSIVFDTIAAESTRLLNENFSMFV 66 Query: 62 RQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPR-- 119 R FL + +PD D IE LS A+ ++QK ST+GTIT+I LRLLF+R G+P Sbjct: 67 RSFLPRVPQPDTDAIENLSMAVIVDQKRLGGGSHSTMGTITDISPILRLLFSRAGQPYVG 126 Query: 120 -------------CPDHDVPLAAQTV--SQMVDNVLSQPEGK-------------RLMLL 151 CP+ + V + VD S EG L++ Sbjct: 127 ESNMFSFNDPQGMCPECNGIGRKLNVDMDKAVDLSKSLNEGAIKLPDYKVDGWDWSLVVQ 186 Query: 152 A-PIIKERKGEH--TKTLENL 169 A P ++K H + LE L Sbjct: 187 AGPFDPDKKLSHYSDEELEKL 207 Score = 170 bits (432), Expect = 2e-40, Method: Composition-based stats. Identities = 75/188 (39%), Positives = 107/188 (56%), Gaps = 11/188 (5%) Query: 762 PCDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAV---------PALARKLQT 812 C C G R ++ L K G I E+ M + + V +L+ +LQ Sbjct: 263 TCSTCHGSRLSQAALSCKMNGFNIAEMSSMEVGQLIRIIHEVDIAVAAPIVKSLSERLQH 322 Query: 813 LMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLL 872 L+D+GL Y+ L + TLSGGE+QRVK+ + LS T YI DEP+ GLH D+ +L Sbjct: 323 LVDIGLDYLTLDRETDTLSGGESQRVKMVKHLSGSLVDVT-YIFDEPSVGLHPRDVHRLN 381 Query: 873 DVLHKLRDQGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHT 932 ++L KLRD+GNT++V+EH+ DVIK AD IVD+GP GS GG I+ G+ + + E + T Sbjct: 382 ELLQKLRDKGNTVIVVEHDPDVIKVADHIVDVGPHAGSHGGTIVYEGSFQGLLES-GTLT 440 Query: 933 ARFLKPML 940 +K L Sbjct: 441 GTHMKRPL 448 Score = 106 bits (265), Expect = 4e-21, Method: Composition-based stats. Identities = 47/153 (30%), Positives = 73/153 (47%), Gaps = 9/153 (5%) Query: 608 NPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNG--- 664 + + + ++GAR NNL++V+L +P T TGVSGSGKS+++ DT+ + R LN Sbjct: 4 SNREYIVISGARENNLQNVSLRIPKRKITIFTGVSGSGKSSIVFDTIAAESTRLLNENFS 63 Query: 665 ---ATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPES 721 + P D +E+ + +DQ +G S T T + +R LF+ + Sbjct: 64 MFVRSFLPRVPQPDTDAIENLSMAVIVDQKRLGGGSHSTMGTITDISPILRLLFSRAGQP 123 Query: 722 RARGYTPGRFSFNVRGGRCEACQGDGV-IKVEM 753 FSFN G C C G G + V+M Sbjct: 124 YVG--ESNMFSFNDPQGMCPECNGIGRKLNVDM 154 Score = 81.5 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 36/115 (31%), Positives = 51/115 (44%), Gaps = 30/115 (26%) Query: 3 KIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYAR 62 K+ ++ A HNL+++N+ IP L VVTG++GSGKS+L D Sbjct: 460 KLSIKNATLHNLQDVNVTIPTGVLTVVTGVAGSGKSTLINDV------------------ 501 Query: 63 QFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGE 117 FLS AI I+Q + + RS T T I D +R FA + Sbjct: 502 -FLSQN-----------PGAIVIDQSAVGVSTRSNPATYTGIMDDVRKAFASANK 544 >UniRef50_Q041B5 Excinuclease ATPase subunit n=53 Tax=Lactobacillaceae RepID=Q041B5_LACGA Length = 846 Score = 689 bits (1779), Expect = 0.0, Method: Composition-based stats. Identities = 245/725 (33%), Positives = 394/725 (54%), Gaps = 28/725 (3%) Query: 216 RLAESFETALELSGGTAVVADMDDPKAEELLFSANFACPICGYSMRELEPRLFSFNNPAG 275 RL S E A ++ EE+ C +CG F+FN+ G Sbjct: 139 RLKPSLEIAEAMAK-----------SGEEM---GQLTCLVCGVKFYAPSAEQFAFNS-DG 183 Query: 276 ACPTCDGLGVQQYFDPDRVIQNPELSLAGGAIRGWDRRNFYYFQMLKSLADHYKFDVEAP 335 AC C G G + D ++I +P LS+ GA+ W + ++A+H ++ P Sbjct: 184 ACEECGGTGKVRQLDDSKLIADPRLSIKDGAVASWSLPG---RNFMPNVAEHAGVRIDIP 240 Query: 336 WGSLSANVHKVVLYGSGKENIEFKYMNDRGDTSIRRHP-FEGVLHNMERRYKETESSAVR 394 + L+ VL G ++ + +++ G + +E + R K ++S + Sbjct: 241 YKDLTDKEKDFVLNG-PEKKYKMDFLSGTGRVFHNFNALYENAHQAVLRSAKTSKSERAQ 299 Query: 395 EELAKFISNRPCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNL--KLAGQR 452 + +++F S + C C G+RL+ E V + + +++M +G + + + + L Sbjct: 300 KRISEFFSYQICPVCHGSRLKPELLKQLVGSLNINEVAEMPLGDLIAWKDQVFKSLPVDM 359 Query: 453 AKIAEKILKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVL 512 K+A + E D L+ L+++GL+YLT++R+ TLS GE QRI+LA + GV+Y+L Sbjct: 360 QKMANALFTEFVDNLQPLLDLGLDYLTMARNGNTLSTGELQRIQLARTLRTETTGVLYIL 419 Query: 513 DEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVV 572 DEPSIGLH + + L+ L L GN+++VV+H+ D I+AAD +I+IGPG+G GGE++ Sbjct: 420 DEPSIGLHPANVDGLIKVLHKLVAQGNSLVVVDHNVDIIKAADEIIEIGPGSGEQGGEIL 479 Query: 573 AEGPLEAIMAVPESLTGQYMSGKRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPV 632 +G ++ I +SL Y+ G + K+ N K + NL+DV +PV Sbjct: 480 DQGSVDQIKKDKQSLIRPYLDGTAALMARKRAEKINSVK-ISFDVDHYFNLQDVHAAIPV 538 Query: 633 GLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSP 692 T +TG SG+GK++LI D+L P Q Q G T+ + + ++V+ +D SP Sbjct: 539 NQLTAVTGFSGAGKTSLILDSLVPAIQAQAKGETLPKQVKNFE----SPINQVVSVDASP 594 Query: 693 IGRTPRSNPATYTGVFTPVRELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVE 752 IG++ RS ATYT + +R+LFA ++ + YTP FS+N + G C C G G++ ++ Sbjct: 595 IGKSTRSTVATYTSIMDNLRKLFARQSLAKEKHYTPTYFSYNNKQGACPTCGGTGIVTLD 654 Query: 753 MHFLPDIYVPCDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQT 812 + FLPD+ C C+G RYN E ++K+ +I ++L++ I EA F P + R L Sbjct: 655 IQFLPDMQQTCPTCEGNRYNHEVQKVKWNSYSIVDILNLDINEALPVFKKEPKIERDLLL 714 Query: 813 LMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLL 872 L +VGL Y+ LG+S TLSGGEAQR+KL LS + TL++ DEPT GLH D++ L+ Sbjct: 715 LKEVGLDYLHLGESTPTLSGGEAQRLKLVTHLSHKQND-TLFVFDEPTIGLHPLDVKVLV 773 Query: 873 DVLHKLRDQGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHT 932 V+ KL DQG TI+ I H+L++I AD I+DLGP GG GG+++ +G + + + S T Sbjct: 774 QVIQKLLDQGATIITITHDLNMIVNADNILDLGPRGGKNGGKVVAAGQTQDLIDHPVSLT 833 Query: 933 ARFLK 937 +L Sbjct: 834 TEYLA 838 Score = 139 bits (350), Expect = 6e-31, Method: Composition-based stats. Identities = 56/136 (41%), Positives = 90/136 (66%) Query: 3 KIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYAR 62 +IEVRG R HNLKNI++ IP K + ++GLSGSGKSSLA LY EG RRY+++LS Y R Sbjct: 17 QIEVRGGRVHNLKNIDVNIPLHKFVAISGLSGSGKSSLAMGILYEEGSRRYLDALSTYMR 76 Query: 63 QFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCPD 122 + + + +V ++ + A+++ Q+ T + R+TVGT++E + LRL+F+R+G P CP+ Sbjct: 77 RRIKQGNQANVISVKHIPSALALRQRPTIPSERATVGTMSETFNILRLIFSRLGSPVCPN 136 Query: 123 HDVPLAAQTVSQMVDN 138 + +++ + Sbjct: 137 GHRLKPSLEIAEAMAK 152 Score = 84.2 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 36/103 (34%), Positives = 54/103 (52%), Gaps = 12/103 (11%) Query: 13 NLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYV-ESLSAYARQFLSLMEKP 71 NL++++ IP ++L VTG SG+GK+SL D+L Q + E+L + F S + + Sbjct: 528 NLQDVHAAIPVNQLTAVTGFSGAGKTSLILDSLVPAIQAQAKGETLPKQVKNFESPINQ- 586 Query: 72 DVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFAR 114 +S++ + RSTV T T I D LR LFAR Sbjct: 587 ----------VVSVDASPIGKSTRSTVATYTSIMDNLRKLFAR 619 Score = 59.9 bits (144), Expect = 4e-07, Method: Composition-based stats. Identities = 38/179 (21%), Positives = 69/179 (38%), Gaps = 42/179 (23%) Query: 613 LKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIA---- 668 +++ G R +NLK++ + +P+ F I+G+SGSGKS+L L+ R+ A Sbjct: 18 IEVRGGRVHNLKNIDVNIPLHKFVAISGLSGSGKSSLAMGILYEEGSRRYLDALSTYMRR 77 Query: 669 --EPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELF----------- 715 + ++ ++H + + Q P + R+ T + F +R +F Sbjct: 78 RIKQGNQANVISVKHIPSALALRQRPTIPSERATVGTMSETFNILRLIFSRLGSPVCPNG 137 Query: 716 -----------AGVPESRARGY-------------TPGRFSFNVRGGRCEACQGDGVIK 750 A G + +F+FN G CE C G G ++ Sbjct: 138 HRLKPSLEIAEAMAKSGEEMGQLTCLVCGVKFYAPSAEQFAFNSDGA-CEECGGTGKVR 195 >UniRef50_B1VG20 Excinuclease ABC, subunit A n=2 Tax=Actinomycetales RepID=B1VG20_CORU7 Length = 863 Score = 687 bits (1774), Expect = 0.0, Method: Composition-based stats. Identities = 247/759 (32%), Positives = 376/759 (49%), Gaps = 43/759 (5%) Query: 220 SFETALELSGGTAVVADMDDPKAE-ELLFSANFACPI---CGYSMRELEPRLFSFNNPAG 275 + + + L G + V + + LLFS + + P L+ FS N AG Sbjct: 103 ALQQSTTLGGARSSVGTISNMSNSIRLLFSRSGSYPNGMRERLEYGRLDSDAFSPNTTAG 162 Query: 276 ACPTCDGLGVQQYFDPDRVIQNPELSLAGGAIRGWDRRNFYYFQMLKSLADHYKFDVEAP 335 CP C G G + ++ +P LS+ GAI W + + + + + ++ P Sbjct: 163 MCPECQGTGTVHRPTEESMVPDPSLSIWDGAIAAW--PGAWLGKNFRDILGTLGYPLDIP 220 Query: 336 WGSLSANVHKVVLYGSGKENIEFKYMNDRGDTS-IRRHPFEGVLHNMERRYKETESSAVR 394 W + +L+ + + + D + + + V + ETES R Sbjct: 221 WRDIPQTDRDWILFTDEQPVVTVHPVRDENAVNGSYKGKWRSVATYLTDTLAETESDKNR 280 Query: 395 EELAKFISNRPCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNL-------- 446 + F+ + C +C+G + + V + +D+++ + Sbjct: 281 RRVLSFMHSSTCPTCQGRGFQPDTLQVTYAGYAIDEFNDLALKDVLAVLEERLQYLAGIA 340 Query: 447 -KLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGL 505 + + + E +L ++ ++ + +GL +L+LSR A +LS GE QR+RLASQ+ + L Sbjct: 341 KQQWTEHDEAEELLLDQVLPTVRAAIKLGLGHLSLSRPARSLSAGEHQRLRLASQLNSSL 400 Query: 506 VGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAG 565 G YVLDEPS GLH + + + L GN+V++VEHD + D ++DIGP AG Sbjct: 401 FGTTYVLDEPSAGLHVVERKAVSELLQRFITAGNSVLLVEHDMSLVAGCDWIVDIGPRAG 460 Query: 566 VHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEVPK-KRVPANPEKVLKLTGARGNNLK 624 GG++V GP + A E L G + + P+ PA + + L+G Sbjct: 461 ERGGQLVFSGPTDQFRATAEQL-GSPTAAALTEDFPELAASPAGTGQSIHLSGIHARAFD 519 Query: 625 DVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLN-------------------GA 665 + P+G T +TGVSGSGKSTL+ L + R G+ Sbjct: 520 GADVDFPLGALTAVTGVSGSGKSTLVIGVLADVVSRSAKQVIGADEVSDEDPDAELTAGS 579 Query: 666 TIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESRARG 725 G++ +++ I Q PIGRT RS ATYTG+F VR LFA PE++ RG Sbjct: 580 GANGDFRVESATGVDKIRRLVHITQKPIGRTVRSTVATYTGLFDHVRRLFAATPEAKQRG 639 Query: 726 YTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKYKGKTI 785 + FS+N GRC C G G I+VE+ FLP Y C C GKRY E LEI++ G++I Sbjct: 640 MSVSDFSYNTTKGRCPECDGAGSIEVELVFLPGTYTTCPACHGKRYKPEILEIEWNGRSI 699 Query: 786 HEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELS 845 ++L +T++EA E F P + R ++ L +GL Y+RLGQ + LSGGEAQR+KLA E+ Sbjct: 700 ADILALTVDEALEVFAEEPRILRSVEFLHALGLGYLRLGQGSPELSGGEAQRIKLASEMQ 759 Query: 846 K-RGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADWIVDL 904 + G +LY+LDEPTTGLH AD+ LL L +L D G T+VV+EH+L V+ AD ++D+ Sbjct: 760 RGSGHKHSLYLLDEPTTGLHPADVDLLLAQLRRLVDDGATVVVVEHDLRVVAQADHVIDV 819 Query: 905 GPEGGSGGGEILVSGTPETVAE-----CEASHTARFLKP 938 GP G GG+IL +GTP VA+ S TA+ L Sbjct: 820 GPGAGDEGGQILATGTPAAVAQQGVHPDSRSVTAQALAE 858 Score = 169 bits (429), Expect = 4e-40, Method: Composition-based stats. Identities = 56/114 (49%), Positives = 81/114 (71%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 63 I VR A HNLK+I++ +PRD L+ VTG+SGSGKSSLAF T++ E QRRY+ES+S +AR+ Sbjct: 23 IRVRDAHLHNLKHIDVDLPRDTLVAVTGVSGSGKSSLAFGTIHGEAQRRYLESVSPFARR 82 Query: 64 FLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGE 117 + P V + GL P ++++Q +T RS+VGTI+ + + +RLLF+R G Sbjct: 83 LIGGAVNPRVGSVTGLPPTVALQQSTTLGGARSSVGTISNMSNSIRLLFSRSGS 136 Score = 101 bits (253), Expect = 1e-19, Method: Composition-based stats. Identities = 49/210 (23%), Positives = 76/210 (36%), Gaps = 27/210 (12%) Query: 599 EVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIA 658 P A + ++++ A +NLK + + LP +TGVSGSGKS+L T+ A Sbjct: 9 PAPHTPERAGHDPMIRVRDAHLHNLKHIDVDLPRDTLVAVTGVSGSGKSSLAFGTIHGEA 68 Query: 659 QRQLNGATIAEPAPYRDIQGLEHFDKVIDID---------QSPIGRTPRSNPATYTGVFT 709 QR+ + R + G +V + QS RS+ T + + Sbjct: 69 QRRYLESVSPFA---RRLIGGAVNPRVGSVTGLPPTVALQQSTTLGGARSSVGTISNMSN 125 Query: 710 PVRELFAGV---PESRARGYTPGR-----FSFNVRGGRCEACQGDGVIKVEMHFLPDIYV 761 +R LF+ P GR FS N G C CQG G + P Sbjct: 126 SIRLLFSRSGSYPNGMRERLEYGRLDSDAFSPNTTAGMCPECQGTGTVH-----RPTEES 180 Query: 762 PCDQCKGKRYNRETLEI--KYKGKTIHEVL 789 ++ + GK ++L Sbjct: 181 MVPDPSLSIWDGAIAAWPGAWLGKNFRDIL 210 Score = 83.8 bits (206), Expect = 3e-14, Method: Composition-based stats. Identities = 40/141 (28%), Positives = 54/141 (38%), Gaps = 35/141 (24%) Query: 3 KIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYAR 62 I + G ++ P L VTG+SGSGKS+L L + +S A+ Sbjct: 507 SIHLSGIHARAFDGADVDFPLGALTAVTGVSGSGKSTLVIGVLA--------DVVSRSAK 558 Query: 63 QFLS----LMEKPD--------------------VDHIEGLSPAISIEQKSTSHNPRSTV 98 Q + E PD VD I L + I QK RSTV Sbjct: 559 QVIGADEVSDEDPDAELTAGSGANGDFRVESATGVDKIRRL---VHITQKPIGRTVRSTV 615 Query: 99 GTITEIHDYLRLLFARVGEPR 119 T T + D++R LFA E + Sbjct: 616 ATYTGLFDHVRRLFAATPEAK 636 >UniRef50_D1JG21 Putative uncharacterized protein n=1 Tax=uncultured archaeon RepID=D1JG21_9ARCH Length = 799 Score = 686 bits (1770), Expect = 0.0, Method: Composition-based stats. Identities = 267/688 (38%), Positives = 404/688 (58%), Gaps = 20/688 (2%) Query: 263 LEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPELSL----AGGAIRGWDRRNFYYF 318 LE + F+FN+P G CP C G G Q F +++ P +L G+ +NF Sbjct: 119 LEFKHFTFNDPNGWCPNCKGQGYIQEFHEKKLVPEPTKNLLQICEEGSAAFGSMKNF--- 175 Query: 319 QMLKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKENIEFKYMNDRGDTSIRRHPFEGVL 378 K LA+ FDV P+ L + + LYGS E ++ K+ ++R + + FEG++ Sbjct: 176 --TKGLAESMNFDVNTPYNKLPQKIRDIFLYGS-DEKMKIKWRSERFE-GVFDTKFEGII 231 Query: 379 HNMERRYKETESSAVREELAK-FISNRPCASCEGTRLRREARHVYVENTPLPAISDMSIG 437 + R +T S+ ++ K F++ C SC G R++ + + + + +++M + Sbjct: 232 PYLWRVLAKTTSAYRINKIEKNFMTKVTCPSCYGYRIKEQVTNATINGKHIGELANMPMD 291 Query: 438 HAMEFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRL 497 +EF L + + I EI RL+ G++YL+L+RS TLSGGE QR+ L Sbjct: 292 ELIEFLKRLADTHVKTVQGKAIKDEIIKRLEKSRLAGISYLSLNRSMTTLSGGEVQRLNL 351 Query: 498 ASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHV 557 + GL ++++LDEPS G+H+ + L+ L + +LGN+VI+VEHD I +D + Sbjct: 352 MIHLNTGLNSLVFILDEPSTGMHEIEKNNLMTLLKEINNLGNSVIIVEHDRSIISKSDQI 411 Query: 558 IDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEVP---KKRVPANPEKVLK 614 ID+GPG G GGE+V +G ++ I +S+TG+++SG+ KI ++R K L Sbjct: 412 IDLGPGPGRLGGEIVFQGTVDEIKKDKKSITGKFLSGELKISKKNSGQRRRITKSAKFLV 471 Query: 615 LTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAEPAPYR 674 + NNLK++ + +P+GL I GVSGSGKS+LI+DTL P+ + + E Sbjct: 472 MKNVTTNNLKNLEVKIPLGLMVGIAGVSGSGKSSLISDTLVPLLKEHFSKRDNEEEFIQI 531 Query: 675 D-----IQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESRARGYTPG 729 D + G E+ I I QSPIGR S P +Y G++ +R+LFA ++ R Y+ G Sbjct: 532 DEIKGKLSGWENISDCIVITQSPIGRVKTSTPVSYIGIWDNIRKLFAKQELAKQRKYSSG 591 Query: 730 RFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKYKGKTIHEVL 789 FSFN G C C+G G I +++ I +PC++C G RY E L+++YKGK HE+L Sbjct: 592 HFSFNSDKGGCPNCKGAGSIDLQISPFTKIDIPCEECNGTRYTPEILDVEYKGKNTHEIL 651 Query: 790 DMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGT 849 ++T+ E+ + F P + + L+ L ++G+ YI LGQ ATTLSGGEAQR+KLA+EL K Sbjct: 652 NLTVSESLDIFKDEPTILKHLKILDEIGMGYITLGQPATTLSGGEAQRIKLAKELGKSRR 711 Query: 850 GQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADWIVDLGPEGG 909 +TLY+LDEPT GLH DIQ++L++L KL DQGNT+++IEHN+D++ AD++V+LGPEGG Sbjct: 712 SKTLYVLDEPTFGLHDNDIQKMLNILDKLVDQGNTVLIIEHNIDILSYADYLVELGPEGG 771 Query: 910 SGGGEILVSGTPETVAECEASHTARFLK 937 GGEI+ GTPE V E S TA FL Sbjct: 772 PKGGEIIAMGTPEEVKMNEQSKTAPFLA 799 Score = 153 bits (386), Expect = 4e-35, Method: Composition-based stats. Identities = 59/113 (52%), Positives = 82/113 (72%), Gaps = 5/113 (4%) Query: 1 MDKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAY 60 M+ IEV GAR HNLKNI + IP++K++ +TG+SGSGKSSLAFD L+ EG+RRY++S+ Sbjct: 1 MNNIEVVGARIHNLKNITVKIPKNKIVTITGVSGSGKSSLAFDLLFEEGRRRYLQSI--- 57 Query: 61 ARQFLSLMEKPDVDHIEGLSPAISIEQKSTSH-NPRSTVGTITEIHDYLRLLF 112 + EKP D + GLSP +++EQ++ + NPRSTVGT T I+ LR L+ Sbjct: 58 GFPYYIEKEKP-FDLLNGLSPTVAVEQRTALYVNPRSTVGTKTMIYSLLRQLY 109 Score = 148 bits (374), Expect = 9e-34, Method: Composition-based stats. Identities = 66/205 (32%), Positives = 109/205 (53%), Gaps = 17/205 (8%) Query: 750 KVEMHFLPDIYVPCDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAVP----- 804 K+E +F+ V C C G R + GK I E+ +M ++E EF + Sbjct: 249 KIEKNFM--TKVTCPSCYGYRIKEQVTNATINGKHIGELANMPMDELIEFLKRLADTHVK 306 Query: 805 ---------ALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYI 855 + ++L+ G++Y+ L +S TTLSGGE QR+ L L G ++I Sbjct: 307 TVQGKAIKDEIIKRLEKSRLAGISYLSLNRSMTTLSGGEVQRLNLMIHL-NTGLNSLVFI 365 Query: 856 LDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEI 915 LDEP+TG+H + L+ +L ++ + GN+++++EH+ +I +D I+DLGP G GGEI Sbjct: 366 LDEPSTGMHEIEKNNLMTLLKEINNLGNSVIIVEHDRSIISKSDQIIDLGPGPGRLGGEI 425 Query: 916 LVSGTPETVAECEASHTARFLKPML 940 + GT + + + + S T +FL L Sbjct: 426 VFQGTVDEIKKDKKSITGKFLSGEL 450 Score = 110 bits (274), Expect = 4e-22, Method: Composition-based stats. Identities = 45/143 (31%), Positives = 75/143 (52%), Gaps = 10/143 (6%) Query: 613 LKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGAT-----I 667 +++ GAR +NLK++T+ +P ITGVSGSGKS+L D LF +R+ + I Sbjct: 4 IEVVGARIHNLKNITVKIPKNKIVTITGVSGSGKSSLAFDLLFEEGRRRYLQSIGFPYYI 63 Query: 668 AEPAPYRDIQGLEHFDKVIDIDQSP-IGRTPRSNPATYTGVFTPVRELFAGVPESRARGY 726 + P+ + GL + ++Q + PRS T T +++ +R+L+ + ++A Sbjct: 64 EKEKPFDLLNGLSP---TVAVEQRTALYVNPRSTVGTKTMIYSLLRQLY-TLESTKAGSL 119 Query: 727 TPGRFSFNVRGGRCEACQGDGVI 749 F+FN G C C+G G I Sbjct: 120 EFKHFTFNDPNGWCPNCKGQGYI 142 Score = 83.1 bits (204), Expect = 5e-14, Method: Composition-based stats. Identities = 43/173 (24%), Positives = 64/173 (36%), Gaps = 35/173 (20%) Query: 2 DKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYA 61 + ++ T+NLKN+ + IP ++ + G+SGSGKSSL DTL V L + Sbjct: 468 KFLVMKNVTTNNLKNLEVKIPLGLMVGIAGVSGSGKSSLISDTL--------VPLLKEHF 519 Query: 62 RQFLSLMEKPDVDHI-------EGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFAR 114 + + E +D I E +S I I Q ST + I D +R LFA+ Sbjct: 520 SKRDNEEEFIQIDEIKGKLSGWENISDCIVITQSPIGRVKTSTPVSYIGIWDNIRKLFAK 579 Query: 115 V--------------------GEPRCPDHDVPLAAQTVSQMVDNVLSQPEGKR 147 G P C + +D + G R Sbjct: 580 QELAKQRKYSSGHFSFNSDKGGCPNCKGAGSIDLQISPFTKIDIPCEECNGTR 632 >UniRef50_B1KRA3 ABC transporter related n=1 Tax=Shewanella woodyi ATCC 51908 RepID=B1KRA3_SHEWM Length = 818 Score = 683 bits (1763), Expect = 0.0, Method: Composition-based stats. Identities = 266/701 (37%), Positives = 389/701 (55%), Gaps = 24/701 (3%) Query: 247 FSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPELSLAGGA 306 ++ C CG L + FS N G C C+GLG F D +I + SL Sbjct: 128 LNSELFCDDCGLYGETLSAKQFSPNRKEGKCLQCNGLGKLASFSVDLIIPDKTKSLN--- 184 Query: 307 IRGWDRRNFYYF------QMLKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKENIEFKY 360 WD F + +++ D++ P+ SLS + LYG+ K Sbjct: 185 -WIWDNAEPNTFSLPNLRKAFEAMCADEGIDIDCPYSSLSDEAKQRALYGTD------KG 237 Query: 361 MNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGTRLRREARH 420 + F G++ E YK+T S ++ ++I + C C+G RLR E+ Sbjct: 238 YTIKVGKVTNDIVFTGIIGYQEYSYKKTTSVTRQKAFERYIGEQHCPGCDGARLRPESLA 297 Query: 421 VYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTL 480 V V M+IG + +++ G ++ I ++ +VNVGL YL L Sbjct: 298 VKVVGKNFNDCQCMAIGDMTYWLSSMIQDGTLPVGVHELANAIINQGHNIVNVGLGYLCL 357 Query: 481 SRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNT 540 +R + +LSGGE QRI LA + + L GVMYVLDEP+IGLH+ D +LL ++ LRDLGN+ Sbjct: 358 NRESASLSGGELQRILLAQHVASDLSGVMYVLDEPTIGLHEEDTLKLLDSMRQLRDLGNS 417 Query: 541 VIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEV 600 ++V+EHDE IRAAD +I+IGPGAG GGEV+ +G E ++ S T ++ + K+ Sbjct: 418 LVVIEHDETIIRAADWIIEIGPGAGSKGGEVIFQGSYEELIDCQASATAKFFRSRDKLS- 476 Query: 601 PKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQR 660 +P E + NNLK T++ PV TC+TGVSGSGKS+L++ + Sbjct: 477 --SHIPPMKE-WFTINDLHRNNLKIDTVSFPVNALTCVTGVSGSGKSSLVSSIYDEA--Q 531 Query: 661 QLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPE 720 +L GA ++QG+E F+ +I ++Q PIGR+ RS ATY G+ +R++FA + Sbjct: 532 RLIGARAKRKELQSNLQGVEVFNDIIYVEQKPIGRSSRSTIATYLGISDDIRDMFAESND 591 Query: 721 SRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKY 780 + A GY FS NV GGRCEAC+G G I+++M + V C++C GK++ + L+IK Sbjct: 592 AIAAGYERKHFSSNVAGGRCEACKGQGYIELDMSIFKNEEVLCEECDGKKFQPQILDIKV 651 Query: 781 KGKTIHEVLDMTIEEAREFF--DAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRV 838 K I++VL+MT++E F DA P++ R L L + GL Y+ LG + TTLSGGEAQR+ Sbjct: 652 HNKNIYDVLNMTVDELVLHFSVDAYPSIHRALSCLAEFGLGYLVLGSATTTLSGGEAQRL 711 Query: 839 KLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTA 898 LA +L K +L+I DEPT GLHF+DI+ LL + +L G+T+++IEHNLDVI + Sbjct: 712 NLATKLLKTKLQSSLFIFDEPTRGLHFSDIRYLLALFDRLLSDGHTVLLIEHNLDVICQS 771 Query: 899 DWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLKPM 939 WIVD+GPEGG GGEI+ G +T+ S TA +K Sbjct: 772 HWIVDVGPEGGDKGGEIVFEGGIDTMLCSSDSLTAIHVKRH 812 Score = 151 bits (382), Expect = 1e-34, Method: Composition-based stats. Identities = 53/128 (41%), Positives = 81/128 (63%), Gaps = 3/128 (2%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 63 I ++G THNLK+I++ IP++K++VVTG+SGSGKSSL DTL+ + Y+ +LS+ + Sbjct: 6 ITMQGVNTHNLKDIDISIPKNKMVVVTGVSGSGKSSLIIDTLFEYSKSLYIGALSS--KS 63 Query: 64 FLSLMEKPDVDHIEGLSPAISIEQKSTS-HNPRSTVGTITEIHDYLRLLFARVGEPRCPD 122 F V+ + G P ++++Q NPRST+GT+T I +RLLFA G+P CP Sbjct: 64 FDMGEGSYQVERVSGTQPPVALKQSVKRLANPRSTIGTVTGIDGLIRLLFAHAGKPSCPA 123 Query: 123 HDVPLAAQ 130 L ++ Sbjct: 124 CFQELNSE 131 Score = 100 bits (248), Expect = 3e-19, Method: Composition-based stats. Identities = 45/168 (26%), Positives = 71/168 (42%), Gaps = 31/168 (18%) Query: 610 EKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAE 669 + + G +NLKD+ +++P +TGVSGSGKS+LI DTLF ++ GA ++ Sbjct: 3 STAITMQGVNTHNLKDIDISIPKNKMVVVTGVSGSGKSSLIIDTLFEYSKSLYIGALSSK 62 Query: 670 PAPYRDIQGLEHFDKVIDIDQSPIG--------RTPRSNPATYTGVFTPVRELFAGVPES 721 + +G ++V Q P+ PRS T TG+ +R LFA + Sbjct: 63 --SFDMGEGSYQVERVSG-TQPPVALKQSVKRLANPRSTIGTVTGIDGLIRLLFAHAGKP 119 Query: 722 R--------------------ARGYTPGRFSFNVRGGRCEACQGDGVI 749 + +FS N + G+C C G G + Sbjct: 120 SCPACFQELNSELFCDDCGLYGETLSAKQFSPNRKEGKCLQCNGLGKL 167 Score = 89.6 bits (221), Expect = 5e-16, Method: Composition-based stats. Identities = 36/122 (29%), Positives = 56/122 (45%), Gaps = 8/122 (6%) Query: 5 EVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQF 64 + +NLK + P + L VTG+SGSGKSSL ++Y E QR + A A++ Sbjct: 487 TINDLHRNNLKIDTVSFPVNALTCVTGVSGSGKSSLV-SSIYDEAQRL----IGARAKRK 541 Query: 65 LSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCPDHD 124 V+ + I +EQK + RST+ T I D +R +FA + ++ Sbjct: 542 ELQSNLQGVEVFNDI---IYVEQKPIGRSSRSTIATYLGISDDIRDMFAESNDAIAAGYE 598 Query: 125 VP 126 Sbjct: 599 RK 600 >UniRef50_A6TUU6 ABC transporter related n=1 Tax=Alkaliphilus metalliredigens QYMF RepID=A6TUU6_ALKMQ Length = 842 Score = 680 bits (1754), Expect = 0.0, Method: Composition-based stats. Identities = 261/692 (37%), Positives = 418/692 (60%), Gaps = 15/692 (2%) Query: 240 PKAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPE 299 P +++ +N C CG + + P++FS+N+P CP C GLGV+ D ++++++PE Sbjct: 145 PWCHQVVDDSN-VCKDCGAILFDRTPQVFSYNHPDYMCPLCKGLGVEMRIDEEKIVEHPE 203 Query: 300 LSLAGGA------IRGWDRR--NFYYFQMLKSLADHYKFDVEAPWGSLSANVHKVVLYGS 351 SL GA +R ++ + + +LAD D+E P+ L + YGS Sbjct: 204 KSLLDGASSLYGDLRKHRKKPNANWMRGEILALADDMNVDLELPFYRLPKEFKQQFFYGS 263 Query: 352 GKENIEFKYMNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEG 411 + Y N +G + + R P EG ++ ++R +T+++ +++ +F+S + C+ C+G Sbjct: 264 NGREVSLAYENSKGRSGVIRRPVEGAINLIQRLAHDTKATRSTDQVHQFMSKKTCSCCQG 323 Query: 412 TRLRREARHVYVENTPLPAISDMSIGHAMEFFNNL--KLAGQRAKIAEKILKEIGDRLKF 469 RL E R V ++ P + +SI ++ + + +L ++ I ++ RLK Sbjct: 324 ERLLEEGRLVNIQGYRYPEVVSLSIDKLRKWCHRIYEQLIKEQQDKTRMIFIKLNQRLKK 383 Query: 470 LVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLG 529 + +VGL Y+TL+RS +LSGGEAQR++LA+Q G GL ++Y++DEPS GLH +D L+ Sbjct: 384 IQSVGLGYITLNRSVPSLSGGEAQRLKLATQFGTGLSNILYIMDEPSKGLHPKDYRFLMD 443 Query: 530 TLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMA--VPESL 587 ++ L+ GNTVI+VEH + + AD + +GP AG +GGE+V + I + + Sbjct: 444 AIVDLKKYGNTVILVEHKKSFLTIADMHLHMGPKAGRYGGELVFVHHRKEIENQLISQDC 503 Query: 588 TGQYMSGKRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKS 647 + + + K V A + ++L G NNLK++ + +P+G+ T + GVSGSGKS Sbjct: 504 SDDFDTIKVIDSVSLDNNKAIKDTYIQLKGVTTNNLKNIDVAIPIGMMTAVIGVSGSGKS 563 Query: 648 TLINDTLFPIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGV 707 TLI+ TL+P L G T+ E ++ + G+E F+ V ++Q IG RSNP TYTGV Sbjct: 564 TLISKTLYPYIMSSL-GRTVEEKGTFQKVIGIESFEDVCYVNQKAIGSNSRSNPGTYTGV 622 Query: 708 FTPVRELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCK 767 F +R+ +A +++ + + FSFN + G+C C G G + V MH++ ++YVPC++C Sbjct: 623 FDLIRQCYADTQQAKKKNLSKEYFSFNSKKGQCPECSGLGEVAVNMHYMDNLYVPCNKCH 682 Query: 768 GKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSA 827 GKRY++E L+I K +I ++LD+ I + E F + R+L L VGL Y++LGQSA Sbjct: 683 GKRYSKEVLKITRKDCSIGDILDIEIHDLLEVFQEEKEIVRQLSMLNKVGLGYLKLGQSA 742 Query: 828 TTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVV 887 +TLSGGEAQR+KLA+EL+K LYILDEPTTGLH D+++++DVL +L+++G TI++ Sbjct: 743 STLSGGEAQRIKLAKELNKNECKNILYILDEPTTGLHEEDVEKVIDVLKELKEKGATIII 802 Query: 888 IEHNLDVIKTADWIVDLGPEGGSGGGEILVSG 919 IEHNL +IK D+IV+LGP GG GG IL +G Sbjct: 803 IEHNLKMIKKCDYIVELGP-GGVQGGHILQAG 833 Score = 163 bits (413), Expect = 3e-38, Method: Composition-based stats. Identities = 56/130 (43%), Positives = 86/130 (66%), Gaps = 1/130 (0%) Query: 3 KIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYAR 62 +I V AR HNLKN+++ I ++ +I++TG+SGSGKSSLAFDT++ E Q+++++ L + Sbjct: 28 EIHVHNARIHNLKNVSVSILKNSIILITGVSGSGKSSLAFDTIFTESQKQFMD-LVLSNQ 86 Query: 63 QFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCPD 122 + VD I GL P+I+IEQ++ NPRSTVG++T+I D +LLFA +G+ CP Sbjct: 87 MLNNTFSDVYVDKITGLQPSIAIEQRNLGVNPRSTVGSVTKIADVFKLLFATIGKRVCPW 146 Query: 123 HDVPLAAQTV 132 + V Sbjct: 147 CHQVVDDSNV 156 Score = 95.8 bits (237), Expect = 7e-18, Method: Composition-based stats. Identities = 39/111 (35%), Positives = 56/111 (50%), Gaps = 7/111 (6%) Query: 3 KIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYAR 62 I+++G T+NLKNI++ IP + V G+SGSGKS+L TLY Y+ +S+ R Sbjct: 528 YIQLKGVTTNNLKNIDVAIPIGMMTAVIGVSGSGKSTLISKTLYP-----YI--MSSLGR 580 Query: 63 QFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFA 113 V IE + QK+ N RS GT T + D +R +A Sbjct: 581 TVEEKGTFQKVIGIESFEDVCYVNQKAIGSNSRSNPGTYTGVFDLIRQCYA 631 Score = 90.4 bits (223), Expect = 3e-16, Method: Composition-based stats. Identities = 48/180 (26%), Positives = 77/180 (42%), Gaps = 30/180 (16%) Query: 612 VLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAEPA 671 + + AR +NLK+V++++ ITGVSGSGKS+L DT+F +Q+Q ++ Sbjct: 28 EIHVHNARIHNLKNVSVSILKNSIILITGVSGSGKSSLAFDTIFTESQKQFMDLVLSNQM 87 Query: 672 PYRDIQGLEHFDKV------IDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPE----- 720 + + DK+ I I+Q +G PRS + T + + LFA + + Sbjct: 88 LNNTFSDV-YVDKITGLQPSIAIEQRNLGVNPRSTVGSVTKIADVFKLLFATIGKRVCPW 146 Query: 721 ---------------SRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQ 765 + TP FS+N C C+G G VEM + V + Sbjct: 147 CHQVVDDSNVCKDCGAILFDRTPQVFSYNHPDYMCPLCKGLG---VEMRIDEEKIVEHPE 203 >UniRef50_D2ATA6 Excinuclease ABC, A subunit n=4 Tax=Actinomycetales RepID=D2ATA6_STRRD Length = 824 Score = 673 bits (1736), Expect = 0.0, Method: Composition-based stats. Identities = 275/691 (39%), Positives = 385/691 (55%), Gaps = 13/691 (1%) Query: 259 SMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPELSLAGGAIRGWDRRNFYYF 318 +R L F + G C C G GV+ DR++ P+L L GA +DR N F Sbjct: 136 ELRGLTSAYFDRYSMEGRCKACGGRGVEVRPAEDRIVTRPDLPLLAGAGTWFDRANSGEF 195 Query: 319 QMLKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKENIEFKYMNDRGD-----TSIRRHP 373 L +LA+ Y D+ PW L + VL+G+G I +K + T R P Sbjct: 196 WALPALAERYGADLALPWRELPEEFRRAVLHGTGDGPITYKITTKQRKAGADVTVERSVP 255 Query: 374 FEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGTRLRREARHVYVENTPLPAISD 433 G + + R + + A RE A+F+ C C GT V + P + Sbjct: 256 LRGAVSEVSRLHDAAGTDAAREHYARFMRRTGCPRCGGTGFGEVGLTVRLAGLAYPEVIR 315 Query: 434 MSIGHAMEFFNNLK--LAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTLSRSAETLSGGE 491 + + + + ++ L + K+A IL + R++ +V +GL +L ++RSA ++SGGE Sbjct: 316 LPVEDLRGWVDTIEPTLTPTQRKVAGDILPGLARRVRLMVELGLGHLQITRSAPSMSGGE 375 Query: 492 AQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAI 551 QR R+ +Q+ L G+++VLDEP GLH D L L LRD GNTV++VEHD + I Sbjct: 376 LQRARITAQLNTDLTGIVFVLDEPGAGLHPADKHPLREILHDLRDAGNTVLLVEHDPELI 435 Query: 552 RAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEVPKKRVPANPEK 611 AD V+D+GPGAG GG +VA P + S+TG Y+ G+ +R Sbjct: 436 ALADWVVDLGPGAGREGGRLVASAPPWELSRDGRSITGAYLGGRGPRVRRTRRSDPATTP 495 Query: 612 VLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAEPA 671 L L G + +N++ + +P+ TCITGVSGSGKS+L+++ L L G P Sbjct: 496 RLGLIGVQAHNVRLDRVDIPLHALTCITGVSGSGKSSLLHEALGASLDAVLRGER---PR 552 Query: 672 PYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESRARGYTPGRF 731 I+G D V +DQ+PIGRTPRS+PATYT F +R L+A P +R+RG G F Sbjct: 553 AVARIEGAGLLDWVTVVDQNPIGRTPRSSPATYTKAFDTIRRLYASTPAARSRGLGAGAF 612 Query: 732 SFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKYKGKTIHEVLDM 791 SFN RGGRCEAC G G +V+MHF+PD++V CD C+G+R+ E L + Y+GK + EVLDM Sbjct: 613 SFNSRGGRCEACAGYGRRQVDMHFMPDMWVGCDVCEGRRFTPELLAVTYRGKAVDEVLDM 672 Query: 792 TIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELS--KRGT 849 T++EA EFF LA L+ GL Y+RLGQSAT LSGGEAQR+KLA + Sbjct: 673 TVDEAAEFFGERADLAATLRAAQQAGLGYLRLGQSATELSGGEAQRLKLANAIMLGGGSR 732 Query: 850 GQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADWIVDLGPEGG 909 G+ L ILDEP TGLH +D+Q+++D L GN++V+ EH+L V ADWIVD+GP G Sbjct: 733 GRGLVILDEPVTGLHPSDVQRVVDAFDTLLACGNSVVIAEHDLHVAACADWIVDMGPGAG 792 Query: 910 SGGGEILVSGTPETVAECEASHTARFLKPML 940 GG I+ G P T+A TA +L+P+L Sbjct: 793 DRGGRIVNEGPPATIAAGPGV-TAGYLRPLL 822 Score = 168 bits (425), Expect = 1e-39, Method: Composition-based stats. Identities = 80/299 (26%), Positives = 129/299 (43%), Gaps = 60/299 (20%) Query: 2 DKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYA 61 D I V GARTHNL+N+++ P+++++ TG+SGSGK+SLA DT++AE Q RY+ +S + Sbjct: 11 DVITVVGARTHNLRNVSVTFPKNRIVAFTGVSGSGKTSLAIDTVHAEAQLRYLNGVSPFF 70 Query: 62 RQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVG----- 116 RQF+S +P VD I GL ++++Q+ + NPRST+G++T + D+L LLFAR+ Sbjct: 71 RQFISPRNRPQVDRISGLGATLAVDQRRLNRNPRSTLGSVTGVDDFLGLLFARMPALGPE 130 Query: 117 --------------------EPRCPDHDVPLAAQTVSQMVDNVLSQP-------EGK--- 146 E RC ++ D ++++P G Sbjct: 131 AREFPELRGLTSAYFDRYSMEGRCKACGGRGVEVRPAE--DRIVTRPDLPLLAGAGTWFD 188 Query: 147 -----RLMLLAPIIKERKGEHTKTLENLASQGYIRARIDGEVCDLSDPPKLELQKKHTIE 201 L + + + L + + RA + G Q+K + Sbjct: 189 RANSGEFWALPALAERYGADLALPWRELPEE-FRRAVLHGTGDGPITYKITTKQRKAGAD 247 Query: 202 VVVDR---FKVRDDLTQRLAESFETALELSGGTAVVADMDDPKAEELLFSANFACPICG 257 V V+R + RL ++ A D + F CP CG Sbjct: 248 VTVERSVPLRGAVSEVSRLHDA--------------AGTDAAREHYARFMRRTGCPRCG 292 Score = 110 bits (275), Expect = 3e-22, Method: Composition-based stats. Identities = 51/159 (32%), Positives = 74/159 (46%), Gaps = 14/159 (8%) Query: 604 RVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLN 663 R V+ + GAR +NL++V++T P TGVSGSGK++L DT+ AQ + Sbjct: 4 RDGTPDGDVITVVGARTHNLRNVSVTFPKNRIVAFTGVSGSGKTSLAIDTVHAEAQLRYL 63 Query: 664 GATIAEPAPYRDIQGLEHFDKV------IDIDQSPIGRTPRSNPATYTGVFTPVRELFAG 717 + + D++ + +DQ + R PRS + TGV + LFA Sbjct: 64 NGVSPFFRQFISPRNRPQVDRISGLGATLAVDQRRLNRNPRSTLGSVTGVDDFLGLLFAR 123 Query: 718 V----PESRA----RGYTPGRFSFNVRGGRCEACQGDGV 748 + PE+R RG T F GRC+AC G GV Sbjct: 124 MPALGPEAREFPELRGLTSAYFDRYSMEGRCKACGGRGV 162 Score = 80.4 bits (197), Expect = 3e-13, Method: Composition-based stats. Identities = 39/115 (33%), Positives = 56/115 (48%), Gaps = 17/115 (14%) Query: 3 KIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYAR 62 ++ + G + HN++ + IP L +TG+SGSGKSSL + L A SL A R Sbjct: 496 RLGLIGVQAHNVRLDRVDIPLHALTCITGVSGSGKSSLLHEALGA--------SLDAVLR 547 Query: 63 QFLSLMEKP-DVDHIEG---LSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFA 113 E+P V IEG L ++Q PRS+ T T+ D +R L+A Sbjct: 548 G-----ERPRAVARIEGAGLLDWVTVVDQNPIGRTPRSSPATYTKAFDTIRRLYA 597 >UniRef50_A0LIN7 Excinuclease ABC subunit A n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LIN7_SYNFM Length = 874 Score = 663 bits (1712), Expect = 0.0, Method: Composition-based stats. Identities = 282/535 (52%), Positives = 385/535 (71%), Gaps = 2/535 (0%) Query: 406 CASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGD 465 C SC G+RL AR ++ + + + +++ +L L+ +A IA++ L+EI Sbjct: 328 CPSCGGSRLNGSARSFFLGGLGIHEACGLQLQAVLDWLADLNLSSSQALIADRPLREIIG 387 Query: 466 RLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNE 525 RL L+ +GL YLTL R+A+TLSGGEAQRIRLA Q+ + L GV+YVLDEPSIGLH RD+ Sbjct: 388 RLNHLLELGLAYLTLDRAADTLSGGEAQRIRLAHQLSSSLSGVLYVLDEPSIGLHPRDHR 447 Query: 526 RLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPE 585 +LL L LRD GN+VIVVEHD I ADHV+D+GPGAG GGEVV G ++ P+ Sbjct: 448 KLLDILFRLRDAGNSVIVVEHDRQTILEADHVVDMGPGAGAGGGEVVFSGTAAQMLEHPD 507 Query: 586 SLTGQYMSGKRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSG 645 SLTG+Y+SG++ I +P +R P L+L GARG+NLK++ + P+G C+TGVSGSG Sbjct: 508 SLTGKYLSGRKVISIPPRRKPF-ARGTLQLRGARGHNLKNIDVDFPLGCLICVTGVSGSG 566 Query: 646 KSTLINDTLFPIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYT 705 KSTL+ TL+ R+L+G+ AP+ + E K++ IDQSP+G+TPRS PATY+ Sbjct: 567 KSTLVLHTLYRALARRLHGSRSP-VAPFDTLGNAEAVGKILLIDQSPLGKTPRSTPATYS 625 Query: 706 GVFTPVRELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQ 765 G+F +R++F+ VPE+RARGY P RFSFN +GGRCEAC+G+G+ ++EM+FLPD+YV C Sbjct: 626 GLFDHIRQVFSQVPEARARGYRPARFSFNAKGGRCEACKGEGLQRIEMYFLPDVYVTCPV 685 Query: 766 CKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQ 825 C G RY +TL+I +KG +I VLDMT+ EA F+ A+ KL TL++VGL Y+RLGQ Sbjct: 686 CGGTRYGNDTLDILFKGHSIASVLDMTVHEAVVLFENFTAIRAKLDTLIEVGLGYLRLGQ 745 Query: 826 SATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTI 885 A TLSGGEAQRVKLA EL +G G+ LYILDEPTTGLHF DI++LL VL +L D G+T+ Sbjct: 746 PANTLSGGEAQRVKLAAELGVKGIGRALYILDEPTTGLHFEDIERLLHVLQRLVDLGHTV 805 Query: 886 VVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLKPML 940 ++IEH+ DV+KTAD+++DLGPEGG GG ++ +G+PE ++ E+S T R+L+ +L Sbjct: 806 ILIEHHPDVVKTADYVIDLGPEGGEQGGYLIGAGSPEELSTVESSFTGRYLREVL 860 Score = 362 bits (930), Expect = 4e-98, Method: Composition-based stats. Identities = 141/304 (46%), Positives = 187/304 (61%), Gaps = 9/304 (2%) Query: 1 MDKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAY 60 MD+I ++GAR HNLKNI+L +PR++ +V+TG+SGSGKSSLAFDTL++EG+RRYVESLS + Sbjct: 4 MDQIVIKGARGHNLKNIDLELPRNRFVVITGVSGSGKSSLAFDTLFSEGRRRYVESLSTH 63 Query: 61 ARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRC 120 ARQ L + P VD I GLSPAI+IEQK NPRSTVGT+TEI+DYLRLL+AR+ C Sbjct: 64 ARQMLQRLSAPPVDEIRGLSPAIAIEQKGLPRNPRSTVGTLTEINDYLRLLYARLSIAHC 123 Query: 121 PDHDVPLAAQTVSQMVDNVLSQ-PEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARI 179 P P+ A TV QMV VL+ P G RL+++AP+ K L+ L G+ R R+ Sbjct: 124 PSCGHPVRAHTVPQMVQEVLAAWPSGSRLLIVAPLEPVPAKHLPKVLQKLTRDGFARIRM 183 Query: 180 DGEVCDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVADMDD 239 D V +L P L + + +EVVVDR + + +RL +SFE A + G ++ Sbjct: 184 DDVVFELDPLPLLPRRAEFRLEVVVDRIVLDESRARRLTDSFEVAAGIGRGMTGAVRLEG 243 Query: 240 PKAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPE 299 E+ FS C CGY + P LFSF++P G CP C GLG D + P Sbjct: 244 G---EMRFSEAHRCVACGYDVPRPTPSLFSFHHPLGTCPECRGLGF-----LDHTVPEPG 295 Query: 300 LSLA 303 + Sbjct: 296 RRVR 299 Score = 178 bits (451), Expect = 1e-42, Method: Composition-based stats. Identities = 75/196 (38%), Positives = 108/196 (55%), Gaps = 15/196 (7%) Query: 403 NRPCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKE 462 C C GTR + + + + ++ DM++ A+ F N Sbjct: 680 YVTCPVCGGTRYGNDTLDILFKGHSIASVLDMTVHEAVVLFEN--------------FTA 725 Query: 463 IGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGV-MYVLDEPSIGLHQ 521 I +L L+ VGL YL L + A TLSGGEAQR++LA+++G +G +Y+LDEP+ GLH Sbjct: 726 IRAKLDTLIEVGLGYLRLGQPANTLSGGEAQRVKLAAELGVKGIGRALYILDEPTTGLHF 785 Query: 522 RDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIM 581 D ERLL L L DLG+TVI++EH D ++ AD+VID+GP G GG ++ G E + Sbjct: 786 EDIERLLHVLQRLVDLGHTVILIEHHPDVVKTADYVIDLGPEGGEQGGYLIGAGSPEELS 845 Query: 582 AVPESLTGQYMSGKRK 597 V S TG+Y+ K Sbjct: 846 TVESSFTGRYLREVLK 861 Score = 108 bits (271), Expect = 1e-21, Method: Composition-based stats. Identities = 48/117 (41%), Positives = 65/117 (55%), Gaps = 7/117 (5%) Query: 3 KIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYAR 62 +++RGAR HNLKNI++ P LI VTG+SGSGKS+L TLY RR S S A Sbjct: 533 TLQLRGARGHNLKNIDVDFPLGCLICVTGVSGSGKSTLVLHTLYRALARRLHGSRSPVA- 591 Query: 63 QFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPR 119 F +L V I + I+Q PRST T + + D++R +F++V E R Sbjct: 592 PFDTLGNAEAVGKI------LLIDQSPLGKTPRSTPATYSGLFDHIRQVFSQVPEAR 642 Score = 94.2 bits (233), Expect = 2e-17, Method: Composition-based stats. Identities = 41/119 (34%), Positives = 59/119 (49%), Gaps = 6/119 (5%) Query: 609 PEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIA 668 P + + GARG+NLK++ L LP F ITGVSGSGKS+L DTLF +R+ + Sbjct: 3 PMDQIVIKGARGHNLKNIDLELPRNRFVVITGVSGSGKSSLAFDTLFSEGRRRYVESLST 62 Query: 669 EPAPYRDIQGLEHFDKV------IDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPES 721 D++ I I+Q + R PRS T T + +R L+A + + Sbjct: 63 HARQMLQRLSAPPVDEIRGLSPAIAIEQKGLPRNPRSTVGTLTEINDYLRLLYARLSIA 121 >UniRef50_A5LJ87 Excinuclease ABC subunit A n=13 Tax=Bacilli RepID=A5LJ87_STRPN Length = 525 Score = 653 bits (1686), Expect = 0.0, Method: Composition-based stats. Identities = 253/495 (51%), Positives = 336/495 (67%), Gaps = 7/495 (1%) Query: 2 DKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYA 61 DKI + GAR HNLKNI++ IPRDKL+VVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYA Sbjct: 3 DKIVIHGARAHNLKNIDVEIPRDKLVVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYA 62 Query: 62 RQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCP 121 RQFL MEKPDVD I+GLSPAISI+QK+TS NPRSTVGT TEI+DYLRLL+ARVG P C Sbjct: 63 RQFLGNMEKPDVDAIDGLSPAISIDQKTTSKNPRSTVGTTTEINDYLRLLYARVGTPYCI 122 Query: 122 DHDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARIDG 181 + + A +V Q+VD VL PE +RL +LAP+I+++KG+H +E + GY+R R+DG Sbjct: 123 NGHGAINASSVEQIVDKVLELPERQRLQILAPVIRKKKGQHKSVIEKVQKDGYVRVRVDG 182 Query: 182 EVCDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVADMDDPK 241 EV D+++ P+L K+H I+VVVDR +++ + RL +S E AL ++ G ++ MDD Sbjct: 183 EVYDVTEVPELSKSKQHNIDVVVDRIVIKEGIRSRLFDSIEAALRIAEGYVIIDTMDD-- 240 Query: 242 AEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPELS 301 ELLFS ++ACP+CG+++ ELEPRLFSFN P G+C CDGLG++ D D V+ + + Sbjct: 241 -SELLFSEHYACPVCGFTVPELEPRLFSFNAPFGSCSECDGLGIKLEVDTDLVVPDASKT 299 Query: 302 LAGGAIRGWDR-RNFYYFQMLKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKENIEFKY 360 L GA+ W+ + YY ML+ + ++ P+ LS ++LYGS + F Y Sbjct: 300 LREGALAPWNPISSNYYPNMLEQAMKVFGVAMDKPFEDLSEEDKNLILYGSDGKEFHFHY 359 Query: 361 MNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGTRLRREARH 420 N+ G PFEGV++N++RRY ET S R ++ +++ C +C+G RL +A Sbjct: 360 ENEFGGVRDIDIPFEGVINNIKRRYHETNSDYTRTQMRLYMNELTCGTCQGYRLNDQALS 419 Query: 421 VYVENT---PLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNVGLNY 477 V V + ISD+SI ++ + L L+ A IA ILKEI DRL FL NVGLNY Sbjct: 420 VRVGGQQGPHIGEISDLSIADHLDLVSQLTLSENEAIIARPILKEIKDRLTFLNNVGLNY 479 Query: 478 LTLSRSAETLSGGEA 492 LTLSRSA T G++ Sbjct: 480 LTLSRSAGTFQVGKS 494 Score = 100 bits (249), Expect = 3e-19, Method: Composition-based stats. Identities = 36/112 (32%), Positives = 57/112 (50%), Gaps = 6/112 (5%) Query: 613 LKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAEPAP 672 + + GAR +NLK++ + +P +TG+SGSGKS+L DTL+ QR+ + A Sbjct: 5 IVIHGARAHNLKNIDVEIPRDKLVVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 64 Query: 673 YR------DIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGV 718 + D+ ++ I IDQ + PRS T T + +R L+A V Sbjct: 65 FLGNMEKPDVDAIDGLSPAISIDQKTTSKNPRSTVGTTTEINDYLRLLYARV 116 Score = 43.0 bits (100), Expect = 0.053, Method: Composition-based stats. Identities = 22/87 (25%), Positives = 38/87 (43%), Gaps = 17/87 (19%) Query: 760 YVPCDQCKGKRYNRETLEIKYKGK-----------TIHEVLD----MTIEEAREFFDA-- 802 + C C+G R N + L ++ G+ +I + LD +T+ E Sbjct: 402 ELTCGTCQGYRLNDQALSVRVGGQQGPHIGEISDLSIADHLDLVSQLTLSENEAIIARPI 461 Query: 803 VPALARKLQTLMDVGLTYIRLGQSATT 829 + + +L L +VGL Y+ L +SA T Sbjct: 462 LKEIKDRLTFLNNVGLNYLTLSRSAGT 488 >UniRef50_C8PNC0 UvrABC system protein A n=4 Tax=cellular organisms RepID=C8PNC0_9SPIO Length = 860 Score = 650 bits (1678), Expect = 0.0, Method: Composition-based stats. Identities = 252/814 (30%), Positives = 406/814 (49%), Gaps = 35/814 (4%) Query: 144 EGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARIDGE-VCDLSD----PPKLELQKKH 198 GK + L + E + + L Y R RI D+ + P L L ++ Sbjct: 64 SGKSSLALGTLYAEGSRRYLEALST-----YTRRRITQSGRADIDEIHHIPAALALHQRP 118 Query: 199 TIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVADMDDPKAEELLFSANFACPICGY 258 I V F + L S G P + + CP+CG Sbjct: 119 GIPGVRSTFGTASE----LLNSLRLMFSRLGSHVCPNWHRTPASMAVALMQPIVCPVCGE 174 Query: 259 SMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPELSLAGGAIRGWDRRNFYYF 318 S +FN+ GACP C G G+ + D ++ + LS+ GA+ W + F Sbjct: 175 SFYGPGAEAMAFNS-DGACPVCSGTGMVREVDDSTLVPDESLSIEDGAVLPW--KLFGLI 231 Query: 319 QMLKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKENIEFKYMNDRGDTSIRRHPFEGVL 378 M K++A+ ++ P+ L+ +V G + + + + G + Sbjct: 232 AMPKTVAE-LGVRIDVPFSELTEEERHIVFAGEETKKM-IVWHSKNGKVFELNCTYYNAH 289 Query: 379 HNMERRYKETESSAVREELAKFISNRPCASCEGTRLRREARHVYVENTPLPAISDMSIGH 438 E ES +++ KF+ PC C+GTRL + R + L + +++ Sbjct: 290 RAAENALHNVESEKGLDKIRKFLREAPCPECKGTRLSKAVRATTLAGKNLAEATALTLDE 349 Query: 439 AMEFFNNLK--LAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIR 496 +++ +++ L+ + +A I+ + D + L ++GL YL+L R++ TLS GE QR++ Sbjct: 350 LLQWVDSVPATLSPEMRPMALSIIGSLADNARRLKDLGLGYLSLDRASSTLSTGERQRVQ 409 Query: 497 LASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADH 556 LA + +GV+YVLDEPSIGLH + + L+ + L GN+V++V+HD ++ AD+ Sbjct: 410 LARAVRNETLGVLYVLDEPSIGLHPSNIDGLMEVVNSLIADGNSVVLVDHDVHVLKRADY 469 Query: 557 VIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEVPKKRVPAN--PEKVLK 614 +I++GP AG GG V+A+G +E I P S +++ + K+ + + Sbjct: 470 IIEMGPLAGNEGGTVIAQGSVEEIAQNPASKIAGFITETETVLTRKRAAKKDLFANGTIH 529 Query: 615 LTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAEPAPYR 674 L + + + + + +P G T +TGVSGSGK+TL+ + L P Q G + P+ Sbjct: 530 LETEQIHTVHALKVDIPKGRLTAVTGVSGSGKTTLVLENLIPALQAAAGGNKVP---PHV 586 Query: 675 DIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESRARGYTPGRFSFN 734 E +V ID +PIG RS ATY+G+ +R+LFAG ++ + T FS+N Sbjct: 587 SKISAEGITRVNLIDAAPIGINVRSTIATYSGISDDLRKLFAGTKAAKEKKLTASEFSYN 646 Query: 735 VRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKYKGK------TIHEV 788 RC C G G I +++ FLPD+ + C C G R+ +E I + K ++ E+ Sbjct: 647 TGTLRCPTCDGTGQISLDVQFLPDVTITCPDCGGSRFGKEAESILWTPKKSEQSYSLPEL 706 Query: 789 LDMTIEEAREFFDA--VPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSK 846 + MT+ +A F A V +A L L ++GL Y+ LG+ LSGGEAQR+KLA E+ K Sbjct: 707 MRMTVRKALPVFSASGVHKIAENLSVLQNLGLGYLTLGEDTPALSGGEAQRLKLAAEMGK 766 Query: 847 RGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADWIVDLGP 906 +++ DEPT GLH D+Q LL V H+L + G T+VVIEH+LDVI +D+I+D+GP Sbjct: 767 TQND-AVFVFDEPTIGLHPLDVQVLLGVFHRLVEAGATVVVIEHDLDVIANSDYIIDMGP 825 Query: 907 EGGSGGGEILVSGTPETVAECEASHTARFLKPML 940 GG+ GG+I+ GTPE + + AS T R+L +L Sbjct: 826 GGGAAGGKIVAYGTPEEITQNPASITGRYLAEVL 859 Score = 180 bits (457), Expect = 2e-43, Method: Composition-based stats. Identities = 59/133 (44%), Positives = 88/133 (66%) Query: 3 KIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYAR 62 I ++GAR HNLKNI++ IP + L+ + G+SGSGKSSLA TLYAEG RRY+E+LS Y R Sbjct: 32 HISIKGARVHNLKNIDVDIPLEMLVAIAGVSGSGKSSLALGTLYAEGSRRYLEALSTYTR 91 Query: 63 QFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCPD 122 + ++ + D+D I + A+++ Q+ RST GT +E+ + LRL+F+R+G CP+ Sbjct: 92 RRITQSGRADIDEIHHIPAALALHQRPGIPGVRSTFGTASELLNSLRLMFSRLGSHVCPN 151 Query: 123 HDVPLAAQTVSQM 135 A+ V+ M Sbjct: 152 WHRTPASMAVALM 164 Score = 162 bits (410), Expect = 6e-38, Method: Composition-based stats. Identities = 74/198 (37%), Positives = 110/198 (55%), Gaps = 18/198 (9%) Query: 406 CASCEGTRLRREARHVYV------ENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKI 459 C C G+R +EA + ++ LP + M++ A+ F+ Sbjct: 675 CPDCGGSRFGKEAESILWTPKKSEQSYSLPELMRMTVRKALPVFS------------ASG 722 Query: 460 LKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGL 519 + +I + L L N+GL YLTL LSGGEAQR++LA+++G ++V DEP+IGL Sbjct: 723 VHKIAENLSVLQNLGLGYLTLGEDTPALSGGEAQRLKLAAEMGKTQNDAVFVFDEPTIGL 782 Query: 520 HQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEA 579 H D + LLG L + G TV+V+EHD D I +D++ID+GPG G GG++VA G E Sbjct: 783 HPLDVQVLLGVFHRLVEAGATVVVIEHDLDVIANSDYIIDMGPGGGAAGGKIVAYGTPEE 842 Query: 580 IMAVPESLTGQYMSGKRK 597 I P S+TG+Y++ K Sbjct: 843 ITQNPASITGRYLAEVLK 860 Score = 87.3 bits (215), Expect = 3e-15, Method: Composition-based stats. Identities = 57/246 (23%), Positives = 93/246 (37%), Gaps = 50/246 (20%) Query: 602 KKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQ 661 KK P + + + GAR +NLK++ + +P+ + I GVSGSGKS+L TL+ R+ Sbjct: 26 KKTRPRH----ISIKGARVHNLKNIDVDIPLEMLVAIAGVSGSGKSSLALGTLYAEGSRR 81 Query: 662 LNGATIAE------PAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELF 715 A + DI + H + + Q P RS T + + +R +F Sbjct: 82 YLEALSTYTRRRITQSGRADIDEIHHIPAALALHQRPGIPGVRSTFGTASELLNSLRLMF 141 Query: 716 AGV-------------------------PESRARGYTPG--RFSFNVRGGRCEACQGDGV 748 + + P Y PG +FN G C C G G+ Sbjct: 142 SRLGSHVCPNWHRTPASMAVALMQPIVCPVCGESFYGPGAEAMAFNSDGA-CPVCSGTGM 200 Query: 749 I-KVEMHFL-PDIYVPCDQCKGKRYNRETLEIKYKGKTIHEV--------LDMTIEEARE 798 + +V+ L PD + + G + + KT+ E+ ++T EE Sbjct: 201 VREVDDSTLVPDESLSIED--GAVLPWKLFGLIAMPKTVAELGVRIDVPFSELTEEERHI 258 Query: 799 FFDAVP 804 F Sbjct: 259 VFAGEE 264 Score = 81.5 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 39/141 (27%), Positives = 56/141 (39%), Gaps = 30/141 (21%) Query: 3 KIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYAR 62 I + + H + + + IP+ +L VTG+SGSGK++L + L + A Sbjct: 527 TIHLETEQIHTVHALKVDIPKGRLTAVTGVSGSGKTTLVLENL-----------IPALQA 575 Query: 63 QFLSLMEKPDVDHI--EGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFA------- 113 P V I EG++ I+ N RST+ T + I D LR LFA Sbjct: 576 AAGGNKVPPHVSKISAEGITRVNLIDAAPIGINVRSTIATYSGISDDLRKLFAGTKAAKE 635 Query: 114 ----------RVGEPRCPDHD 124 G RCP D Sbjct: 636 KKLTASEFSYNTGTLRCPTCD 656 >UniRef50_C9XKB3 Putative antibiotic resistance ABC transporter, ATP-binding protein n=4 Tax=Clostridium difficile RepID=C9XKB3_CLODC Length = 747 Score = 650 bits (1677), Expect = 0.0, Method: Composition-based stats. Identities = 264/718 (36%), Positives = 392/718 (54%), Gaps = 69/718 (9%) Query: 228 SGGTAVVADMDDPKAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQ 287 + V + D + L + P G + FSFN+P G C C G+G + Sbjct: 92 GNARSTVGTISDLYSSLRLLFSRIGEPYIGTT------SYFSFNDPNGMCKNCSGIGRVK 145 Query: 288 YFDPDRVIQNPELSLAGGAI-RGWDRRNFYYFQMLKSLADHYKFDVEAPWGSLSANVHKV 346 + + +I NPE S G I + N +Y+ K A+ FD++ P S + + Sbjct: 146 VINIESII-NPENSWNTGCINDSLFKPNSWYW---KQYAESGLFDLDKPIKDYSFEEYNL 201 Query: 347 VLYGSGKENIEFKYMNDRGDTSIRRHPFEGVLHNMERRYKETE----SSAVREELAKFIS 402 +LYGS + D EG+ + + Y + S +E+ + I+ Sbjct: 202 LLYGSKNK-----------DGKQENPKIEGIFNKYNQTYLNRDISNMSKHTKEKSERLIT 250 Query: 403 NRPCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKE 462 ++ C C G RL +E + + + + +M + + +K K E ++K Sbjct: 251 DKECPVCHGKRLNKETLNCNILGYSIADMCNMELTDLYDLLLQIK-----DKRTETVIKT 305 Query: 463 IGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQR 522 + D LK ++++GL YL L+R + +LSGGEAQR++L +G+ L G+ Y+ DEPS G+H R Sbjct: 306 LTDGLKRMIDIGLPYLHLNRESSSLSGGEAQRLKLVRYMGSSLTGMTYIFDEPSAGMHPR 365 Query: 523 DNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMA 582 D R+ L LRD GNTV+VVEHD+D I AD VIDIGP AG GG VV +G + ++ Sbjct: 366 DVHRMNQLLKKLRDRGNTVLVVEHDKDVISIADEVIDIGPSAGTQGGHVVFQGSYDKLL- 424 Query: 583 VPESLTGQYMSGKRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVS 642 + +LT M+ + +P K +P+ L + A NNLK + + LPVG+ T +TGV+ Sbjct: 425 LANTLTSNAMN----LSLPIKTDSRHPKGTLPIRDACINNLKHIDVDLPVGIMTVVTGVA 480 Query: 643 GSGKSTLINDTLFPIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPA 702 GSGKSTLI+ ++ VI IDQSP+ T RS PA Sbjct: 481 GSGKSTLISRVFAQKYEK-----------------------DVIKIDQSPVTATNRSMPA 517 Query: 703 TYTGVFTPVRELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVP 762 T+ G F +R++FA + G FSFN +G C C G GV+ E+ F+ I Sbjct: 518 TFLGFFDEIRKVFA-----KENNVEEGLFSFNSKGA-CPVCDGKGVLVTELVFMDPIINT 571 Query: 763 CDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIR 822 C+ CKG RY+ E L YKGK I +VL MT++E+ EFF L + LQT+ DVGL Y+ Sbjct: 572 CEACKGTRYSEEVLSKLYKGKCIVDVLSMTVDESLEFFTE-KKLCKILQTMKDVGLPYMT 630 Query: 823 LGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQG 882 LGQ +TLSGGE QR+KLA+ L+K+G T+YILDEPTTGLH +DI++L+ + + D+G Sbjct: 631 LGQPLSTLSGGERQRIKLAKNLNKKG---TIYILDEPTTGLHGSDIEKLMLIFEHIVDKG 687 Query: 883 NTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLKPML 940 NT+++IEHNLDV+K ADW++D+GP+GG GG+++ GTP + E + T+ FL+ + Sbjct: 688 NTVIIIEHNLDVLKQADWVIDIGPDGGKNGGQVVFEGTPLEMFERGCTITSDFLRKSI 745 Score = 185 bits (471), Expect = 5e-45, Method: Composition-based stats. Identities = 55/119 (46%), Positives = 83/119 (69%) Query: 1 MDKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAY 60 M I ++G +NLKNI+ IP++K++V TG+SGSGKSS+ FDT+ AE QR+ E+ S++ Sbjct: 1 MSNIIIKGLTQNNLKNISFKIPKNKIVVFTGVSGSGKSSIVFDTIAAESQRQMNETYSSF 60 Query: 61 ARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPR 119 R L KP V+ I+ L+ ++ ++Q N RSTVGTI++++ LRLLF+R+GEP Sbjct: 61 IRNRLPKYRKPQVELIDNLTASVIVDQTPLGGNARSTVGTISDLYSSLRLLFSRIGEPY 119 Score = 119 bits (299), Expect = 5e-25, Method: Composition-based stats. Identities = 48/145 (33%), Positives = 76/145 (52%), Gaps = 8/145 (5%) Query: 613 LKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLN---GATIAE 669 + + G NNLK+++ +P TGVSGSGKS+++ DT+ +QRQ+N + I Sbjct: 4 IIIKGLTQNNLKNISFKIPKNKIVVFTGVSGSGKSSIVFDTIAAESQRQMNETYSSFIRN 63 Query: 670 PAPYRDIQGLEHFDKV---IDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESRARGY 726 P +E D + + +DQ+P+G RS T + +++ +R LF+ + E Sbjct: 64 RLPKYRKPQVELIDNLTASVIVDQTPLGGNARSTVGTISDLYSSLRLLFSRIGEPYIG-- 121 Query: 727 TPGRFSFNVRGGRCEACQGDGVIKV 751 T FSFN G C+ C G G +KV Sbjct: 122 TTSYFSFNDPNGMCKNCSGIGRVKV 146 Score = 73.8 bits (180), Expect = 3e-11, Method: Composition-based stats. Identities = 36/132 (27%), Positives = 53/132 (40%), Gaps = 40/132 (30%) Query: 6 VRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQFL 65 +R A +NLK+I++ +P + VVTG++GSGKS+L +R F Sbjct: 453 IRDACINNLKHIDVDLPVGIMTVVTGVAGSGKSTLI-------------------SRVFA 493 Query: 66 SLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVG--------- 116 EK DV I I+Q + RS T D +R +FA+ Sbjct: 494 QKYEK-DV---------IKIDQSPVTATNRSMPATFLGFFDEIRKVFAKENNVEEGLFSF 543 Query: 117 --EPRCPDHDVP 126 + CP D Sbjct: 544 NSKGACPVCDGK 555 >UniRef50_C4DT53 Excinuclease ATPase subunit n=3 Tax=Bacteria RepID=C4DT53_9ACTO Length = 780 Score = 647 bits (1670), Expect = 0.0, Method: Composition-based stats. Identities = 264/742 (35%), Positives = 374/742 (50%), Gaps = 83/742 (11%) Query: 226 ELSGG-TAVVADMDDPKAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLG 284 L G + V + D L + P G + +FSFN+PAG C C GLG Sbjct: 93 RLGGNSRSTVGTITDIYTLLRLLYSRVGSPNIGGAY------VFSFNDPAGMCERCQGLG 146 Query: 285 VQQYFDPDRVIQNPELSLAGGAIRGWDRRNFYYFQMLKSLADHYKFDVEAPWGSLSANVH 344 D D + + SL GA+ D + +F + + FD++ P Sbjct: 147 RVVTVDMDEFV-DMSKSLNEGALLHPDFKVGKWFWNM--YSASGFFDMDKPLAEYGKEEL 203 Query: 345 KVVLYGSGKENIEFKYMNDRGDTSIRRHPFEGVLHNMERRY----KETESSAVREELAKF 400 ++ +G+ I F + +EG + R E S R +F Sbjct: 204 DILFHGT-DAKIPFAWEGGT-----INSKYEGAVEKFTRLIMSKSAEEMSDRNRAIFERF 257 Query: 401 ISNRPCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKIL 460 + C +CEG RL + R + + ++ M I + L+G ++++L Sbjct: 258 TTTGVCDACEGLRLNEKVRSCKLAGLHIAEMASMEITDLVRV-----LSGVDGGSSQRVL 312 Query: 461 KEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLH 520 + +RL L+ +GL YL+L R+ +LSGGE+QRI+ + + L +MY+ DEPSIGLH Sbjct: 313 DSLLERLDHLITIGLGYLSLHRATGSLSGGESQRIKTVRNLNSSLTEMMYIFDEPSIGLH 372 Query: 521 QRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAI 580 RD R+ L+ LRD GNTV+VVEHD D I ADHVID+GPGAG HGG +V EGP+ + Sbjct: 373 ARDVHRMNELLVKLRDKGNTVLVVEHDPDVIAVADHVIDVGPGAGTHGGTIVYEGPVAGL 432 Query: 581 MAVPESLTGQYMSGKRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITG 640 ++ TG + +R+ + + AN + + +N+ V++ P G+ T +TG Sbjct: 433 KEA-DTPTGAQL--RRRSGLKDETRAANGK--YPVADVNSHNVSGVSVDFPAGVLTVVTG 487 Query: 641 VSGSGKSTLINDTLFPIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSN 700 V+GSGKSTL+ + L L I IDQ+ + RSN Sbjct: 488 VAGSGKSTLVTEGL------------------------LTQHPDAIVIDQTAVAANRRSN 523 Query: 701 PATYTGVFTPVRELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIY 760 ATYTG+ +R+LFA V G P FSFN G C CQG GVI ++ F+ + Sbjct: 524 TATYTGLADGIRKLFANV-----NGVKPSLFSFNSDGA-CPDCQGHGVIYTDLAFMDGVK 577 Query: 761 VPCDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTY 820 PC+ C+GKR+ E L +GK I +VL++T EEA EFF L L+ L DVGL Y Sbjct: 578 TPCETCEGKRFKSEVLAHTVRGKNISDVLNLTAEEAAEFFTE-KKLRTVLRALNDVGLDY 636 Query: 821 IRLGQSATTLSGGEAQRVKLARELSK----------------------RGTGQTLYILDE 858 + LGQ TLSGGE QR+KLA ELS LY++DE Sbjct: 637 LTLGQPLNTLSGGECQRIKLATELSSMYSQASPAPTGSIGSGARASSFSARLNRLYVMDE 696 Query: 859 PTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVS 918 PTTGLH +DI++LL + L D GNT+++IEHN+DVIK ADWI+DLGP+GGS GG ++ Sbjct: 697 PTTGLHMSDIEKLLGLFDHLVDSGNTVIIIEHNMDVIKHADWIIDLGPDGGSSGGRVMFE 756 Query: 919 GTPETVAECEASHTARFLKPML 940 GTP + + SHT FL+ L Sbjct: 757 GTPRQLLDTRGSHTGDFLRREL 778 Score = 191 bits (486), Expect = 1e-46, Method: Composition-based stats. Identities = 90/298 (30%), Positives = 132/298 (44%), Gaps = 52/298 (17%) Query: 3 KIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYAR 62 I++ GAR +NLKNI++ IP+ ++ V TG+SGSGKSS+ FDT+ AE QR+ E+ SA+ R Sbjct: 7 SIDITGARENNLKNIDITIPKHRITVFTGVSGSGKSSIVFDTVAAEAQRQINETHSAFVR 66 Query: 63 QFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPR--- 119 FL +PD D IE LS AI I+Q+ N RSTVGTIT+I+ LRLL++RVG P Sbjct: 67 GFLPKYGQPDADAIENLSAAIIIDQQRLGGNSRSTVGTITDIYTLLRLLYSRVGSPNIGG 126 Query: 120 ------------CPDHD--VPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKT 165 C + + + VD S EG LL P K K Sbjct: 127 AYVFSFNDPAGMCERCQGLGRVVTVDMDEFVDMSKSLNEGA---LLHPDFKVGKWFW--- 180 Query: 166 LENLASQGYIRARIDGEVCDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETAL 225 ++ G+ D+ P L K ++++ ++ ++E Sbjct: 181 -NMYSASGF---------FDMDKP--LAEYGKEELDILF------HGTDAKIPFAWE--- 219 Query: 226 ELSGGTAVVADMDDPKAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGL 283 GGT ++ + M + +F G C C+GL Sbjct: 220 ---GGT-----INSKYEGAVEKFTRLIMSKSAEEMSDRNRAIFERFTTTGVCDACEGL 269 Score = 127 bits (319), Expect = 3e-27, Method: Composition-based stats. Identities = 58/153 (37%), Positives = 81/153 (52%), Gaps = 9/153 (5%) Query: 608 NPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATI 667 + + +TGAR NNLK++ +T+P T TGVSGSGKS+++ DT+ AQRQ+N Sbjct: 3 SGSTSIDITGARENNLKNIDITIPKHRITVFTGVSGSGKSSIVFDTVAAEAQRQINETHS 62 Query: 668 AEPAPYR------DIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPES 721 A + D +E+ I IDQ +G RS T T ++T +R L++ V Sbjct: 63 AFVRGFLPKYGQPDADAIENLSAAIIIDQQRLGGNSRSTVGTITDIYTLLRLLYSRVGSP 122 Query: 722 RARGYTPGRFSFNVRGGRCEACQGDG-VIKVEM 753 G FSFN G CE CQG G V+ V+M Sbjct: 123 NIGG--AYVFSFNDPAGMCERCQGLGRVVTVDM 153 Score = 76.5 bits (187), Expect = 5e-12, Method: Composition-based stats. Identities = 44/170 (25%), Positives = 64/170 (37%), Gaps = 46/170 (27%) Query: 6 VRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQFL 65 V +HN+ +++ P L VVTG++GSGKS+L + L Sbjct: 462 VADVNSHNVSGVSVDFPAGVLTVVTGVAGSGKSTLVTEGLLT------------------ 503 Query: 66 SLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVG--------- 116 + PD AI I+Q + + N RS T T + D +R LFA V Sbjct: 504 ---QHPD---------AIVIDQTAVAANRRSNTATYTGLADGIRKLFANVNGVKPSLFSF 551 Query: 117 --EPRCPDH---DVPLAAQTVSQMVDNVLSQPEGKRL--MLLAPIIKERK 159 + CPD V V EGKR +LA ++ + Sbjct: 552 NSDGACPDCQGHGVIYTDLAFMDGVKTPCETCEGKRFKSEVLAHTVRGKN 601 >UniRef50_C1B8F2 UvrA-like protein n=57 Tax=Bacteria RepID=C1B8F2_RHOOB Length = 806 Score = 647 bits (1669), Expect = 0.0, Method: Composition-based stats. Identities = 280/861 (32%), Positives = 409/861 (47%), Gaps = 113/861 (13%) Query: 105 HDYLRLLFARVGEPRCPDHDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTK 164 HD +R+ AR + ++P TV V GK ++ A I E + + Sbjct: 30 HDLIRVHGARENNLKDISVELPKRRLTVFTGVS-----GSGKSSLVFATIAAESQRMINE 84 Query: 165 TLENLASQGYIR--ARIDGEVCD------LSDPPKLELQKKHTIEVVVDRFKVRDDLTQR 216 T QG++ AR D +V D + D ++ + T+ D + L R Sbjct: 85 TYSAFV-QGFMPTLARPDVDVLDGLTTAIIVDQERMGSNPRSTVGTATDANAMLRILFSR 143 Query: 217 LAE---------SFETALELSGGTAVVADMDDPKAEELLFSANFACPICGYSMRELEPRL 267 L + SF A G + E Sbjct: 144 LGKPHIGSPQAFSFNVASISGAGAVTIERGGQQIKERR---------------------- 181 Query: 268 FSFNNPAGACPTCDGLGVQQYFDPDRVIQNPELSLAGGAIR-GWDRRNFYYFQMLKSLAD 326 SF+ G CP C+G G FD + + SL GA+ +Y ++ + Sbjct: 182 -SFSLTGGMCPRCEGRGSVTDFDLTALYDD-SKSLNEGALTIPGYSMEGWYGRIYRGCG- 238 Query: 327 HYKFDVEAPWGSLSANVHKVVLYGSGKENIEFKYMNDRGDTSIRRHPFEGVLHNMERRYK 386 FD + P + + +LY KE + K FEG++ +++ + Sbjct: 239 --FFDPDKPIAKFTKKQLQDLLY---KEPTKIKVEG-------VNITFEGLIPKIQKSFL 286 Query: 387 ----ETESSAVREELAKFISNRPCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEF 442 + +R + + I+ C CEGTRL AR ++ + + M I ++ Sbjct: 287 AKDVDAMQPHIRAFVERAITFATCPDCEGTRLSEGARSSKIKGKNIADVCSMQISDLADW 346 Query: 443 FNNLKLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIG 502 LK +L + L +GL YL+L R + TLSGGEAQR ++ +G Sbjct: 347 VRGLK-----EPSVAPLLTGLQHLLDSFTEIGLGYLSLDRPSGTLSGGEAQRTKMIRHLG 401 Query: 503 AGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGP 562 + L V YV DEP+IGLH D +R+ G L+ LRD GNTV+VVEH +AI ADHV+D+GP Sbjct: 402 SSLTDVTYVFDEPTIGLHPHDIQRMNGLLLQLRDKGNTVLVVEHKPEAIAIADHVVDLGP 461 Query: 563 GAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEVPKKRVPANPEKVLKLTGARGNN 622 AG GGEVV EG +E + ++LTG+++ + + K L++ GA +N Sbjct: 462 RAGTEGGEVVFEGTVEG-LRASDTLTGRHLDDRATL----KSSVRESSGALEVRGADTHN 516 Query: 623 LKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAEPAPYRDIQGLEHF 682 L V + +P+G+ +TGV+GSGKS+LI+ ++ Sbjct: 517 LCGVDVDIPLGMLVVVTGVAGSGKSSLIHGSVADR------------------------- 551 Query: 683 DKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESRARGYTPGRFSFNVRGGRCEA 742 D V+ IDQ I + RSNPATYTG+ P+R+ FA +A G P FS N G C Sbjct: 552 DGVVAIDQGAIKGSRRSNPATYTGLLEPIRKAFA-----KANGVKPALFSSNSEGA-CPT 605 Query: 743 CQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDA 802 C G GVI ++ + + PC++C+GKR+ E LE K G+ I EVL M + EA EFF A Sbjct: 606 CNGAGVIYTDLGVMATVESPCEECEGKRFQAEVLEFKLGGRNIAEVLAMPVAEAEEFFGA 665 Query: 803 ----VPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDE 858 +PA + LQ L DVGL Y+ LGQ TTLSGGE QR+KLA ++ +G +Y+LDE Sbjct: 666 GEARIPAAHKILQRLADVGLGYLSLGQPLTTLSGGERQRLKLATAMADKG---EIYVLDE 722 Query: 859 PTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVS 918 PTTGLH AD++QLL +L +L D G +++VIEH+ V+ ADWI+DLGP G GG I+ Sbjct: 723 PTTGLHLADVEQLLGLLDRLVDSGKSVIVIEHHQAVMAHADWIIDLGPGAGHDGGRIVFE 782 Query: 919 GTPETVAECEASHTARFLKPM 939 G PE + ++ T L Sbjct: 783 GRPEDLVADASTLTGEHLAAY 803 Score = 178 bits (452), Expect = 1e-42, Method: Composition-based stats. Identities = 58/118 (49%), Positives = 85/118 (72%) Query: 2 DKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYA 61 D I V GAR +NLK+I++ +P+ +L V TG+SGSGKSSL F T+ AE QR E+ SA+ Sbjct: 31 DLIRVHGARENNLKDISVELPKRRLTVFTGVSGSGKSSLVFATIAAESQRMINETYSAFV 90 Query: 62 RQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPR 119 + F+ + +PDVD ++GL+ AI ++Q+ NPRSTVGT T+ + LR+LF+R+G+P Sbjct: 91 QGFMPTLARPDVDVLDGLTTAIIVDQERMGSNPRSTVGTATDANAMLRILFSRLGKPH 148 Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats. Identities = 53/176 (30%), Positives = 77/176 (43%), Gaps = 34/176 (19%) Query: 607 ANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGAT 666 A+ ++++ GAR NNLKD+++ LP T TGVSGSGKS+L+ T+ +QR +N Sbjct: 27 ADSHDLIRVHGARENNLKDISVELPKRRLTVFTGVSGSGKSSLVFATIAAESQRMINETY 86 Query: 667 IA------EPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPE 720 A D+ L+ I +DQ +G PRS T T +R LF+ + + Sbjct: 87 SAFVQGFMPTLARPDVDVLDGLTTAIIVDQERMGSNPRSTVGTATDANAMLRILFSRLGK 146 Query: 721 SRARGYTPGRFSFNV--------------------------RGGRCEACQGDGVIK 750 +P FSFNV GG C C+G G + Sbjct: 147 PHIG--SPQAFSFNVASISGAGAVTIERGGQQIKERRSFSLTGGMCPRCEGRGSVT 200 Score = 82.3 bits (202), Expect = 8e-14, Method: Composition-based stats. Identities = 44/160 (27%), Positives = 66/160 (41%), Gaps = 45/160 (28%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 63 +EVRGA THNL +++ IP L+VVTG++GSGKSSL ++ Sbjct: 507 LEVRGADTHNLCGVDVDIPLGMLVVVTGVAGSGKSSLIHGSVA----------------- 549 Query: 64 FLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVG------- 116 D D + ++I+Q + + RS T T + + +R FA+ Sbjct: 550 --------DRDGV------VAIDQGAIKGSRRSNPATYTGLLEPIRKAFAKANGVKPALF 595 Query: 117 ----EPRCPDH---DVPLAAQTVSQMVDNVLSQPEGKRLM 149 E CP V V V++ + EGKR Sbjct: 596 SSNSEGACPTCNGAGVIYTDLGVMATVESPCEECEGKRFQ 635 >UniRef50_C2ENC0 Excinuclease subunit A n=1 Tax=Lactobacillus ultunensis DSM 16047 RepID=C2ENC0_9LACO Length = 755 Score = 641 bits (1655), Expect = 0.0, Method: Composition-based stats. Identities = 242/714 (33%), Positives = 378/714 (52%), Gaps = 60/714 (8%) Query: 228 SGGTAVVADMDDPKAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQ 287 + V + D L + P G SM +S N+PAG CPTC GLG Q Sbjct: 94 GSSRSTVGTIVDVAPLLRLLYSRVGQPSAGGSMS------YSPNHPAGMCPTCTGLGKIQ 147 Query: 288 YFDPDRVIQNPELSLAGGAIRGWDRRNFYYFQMLKSLADHYKFDVEAPWGSLSANVHKVV 347 D D + + S+ GAI + + + + + + D S +++ Sbjct: 148 ELDEDSLF-DVNKSINEGAILFEPFSSGWQSYL---YSTNPQLDPNKKLKDFSEKEWQIL 203 Query: 348 LYGSGKENIEFKYMNDRGDTSIRRHPFEGVLHNMERRYKETE----SSAVREELAKFISN 403 YG +E N G + R +EGV+ +R Y + + S R ++ ++ Sbjct: 204 KYGDNQEVKIEIRSNKTG--RVDRVDYEGVIPRFKRLYLKRDISKLSKKSRTQVLSHVTT 261 Query: 404 RPCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEI 463 PC++C GT L A + + ++ +S+ + + + + A+ + ++I Sbjct: 262 VPCSACAGTGLNPRALASKINGLNIVDMTALSVDELLPYLDKID-----DPRAKSLSRQI 316 Query: 464 GDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRD 523 + ++ ++++G+ YL+L R TLSGGE QR+++ +G+ L V Y+LDEP+ GLH D Sbjct: 317 ANTIQHMIDIGVGYLSLDRKTNTLSGGEMQRLKIVRNLGSSLNNVTYILDEPTTGLHPAD 376 Query: 524 NERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAV 583 +++ L++LRD N V+VVEH I AD V+++GP AG GG++V +G L + Sbjct: 377 IDKIGKMLLNLRDAHNNVLVVEHSRQIINLADEVVEMGPQAGSAGGQIVYQGDLTGLKKA 436 Query: 584 PESLTGQYMSGKRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSG 643 ++LTG + K ++ + P + A +NLK V + +P + T +TGV+G Sbjct: 437 -DTLTGHDLVQKIELN----KEPRKWSDSFHIRDAHCHNLKHVDVDIPKNVLTAVTGVAG 491 Query: 644 SGKSTLINDTLFPIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPAT 703 SGKS+LI Y I+ + I IDQ PIG + RS PAT Sbjct: 492 SGKSSLIR---------------------YDFIK---QHPEAIVIDQKPIGTSIRSTPAT 527 Query: 704 YTGVFTPVRELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPC 763 YTGV +R++F +A P FSFN +G C C+G GVIK +M F + V C Sbjct: 528 YTGVMDEIRKIF-----GKANNVAPSWFSFNSKGA-CPICKGRGVIKYDMAFADAVEVIC 581 Query: 764 DQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRL 823 ++C+G RY+++ L KY+GK I EV++ TI +A FFD + LQ L+DVGL Y+ L Sbjct: 582 EECQGHRYSQKALSYKYQGKNIEEVMNFTISDAINFFDNQ-KITNALQKLIDVGLGYLTL 640 Query: 824 GQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGN 883 GQ +TLSGGE QR+K+A EL+K+G +Y++DEP GLH +I+ L +L KL + GN Sbjct: 641 GQPTSTLSGGEIQRIKIAAELNKKGN---IYVMDEPAAGLHSENIKTLNKLLQKLVNNGN 697 Query: 884 TIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLK 937 T+++IEH L++I ADWI+D+GPEGGS GG++ +GTP+ + S T +LK Sbjct: 698 TVIIIEHRLELISKADWIIDIGPEGGSKGGKVCFTGTPQELCHDTNSKTGIYLK 751 Score = 173 bits (440), Expect = 2e-41, Method: Composition-based stats. Identities = 61/148 (41%), Positives = 90/148 (60%), Gaps = 15/148 (10%) Query: 2 DKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYA 61 DKIE+ A +NLK+I+L IP++KL+V G+SGSGKSSL FDT+ E R + S S Y Sbjct: 4 DKIEIIKANENNLKDISLSIPKNKLVVFAGVSGSGKSSLVFDTIATESSREWQNSYSLYL 63 Query: 62 RQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPR-- 119 R + ++PDV+ I+ L+PAI ++Q+++S + RSTVGTI ++ LRLL++RVG+P Sbjct: 64 RNKMPHYQRPDVESIKNLTPAIVVKQQASSGSSRSTVGTIVDVAPLLRLLYSRVGQPSAG 123 Query: 120 -------------CPDHDVPLAAQTVSQ 134 CP Q + + Sbjct: 124 GSMSYSPNHPAGMCPTCTGLGKIQELDE 151 Score = 99.6 bits (247), Expect = 5e-19, Method: Composition-based stats. Identities = 43/160 (26%), Positives = 65/160 (40%), Gaps = 44/160 (27%) Query: 2 DKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYA 61 D +R A HNLK++++ IP++ L VTG++GSGKSSL RY Sbjct: 459 DSFHIRDAHCHNLKHVDVDIPKNVLTAVTGVAGSGKSSLI----------RY-------- 500 Query: 62 RQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLF--------- 112 D I+ AI I+QK + RST T T + D +R +F Sbjct: 501 ------------DFIKQHPEAIVIDQKPIGTSIRSTPATYTGVMDEIRKIFGKANNVAPS 548 Query: 113 -----ARVGEPRCPDHDVPLAAQTVSQMVDNVLSQPEGKR 147 ++ P C V + V+ + + +G R Sbjct: 549 WFSFNSKGACPICKGRGVIKYDMAFADAVEVICEECQGHR 588 Score = 96.9 bits (240), Expect = 4e-18, Method: Composition-based stats. Identities = 41/146 (28%), Positives = 66/146 (45%), Gaps = 8/146 (5%) Query: 610 EKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQ------LN 663 + +++ A NNLKD++L++P GVSGSGKS+L+ DT+ + R+ L Sbjct: 3 DDKIEIIKANENNLKDISLSIPKNKLVVFAGVSGSGKSSLVFDTIATESSREWQNSYSLY 62 Query: 664 GATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESRA 723 D++ +++ I + Q + RS T V +R L++ V + A Sbjct: 63 LRNKMPHYQRPDVESIKNLTPAIVVKQQASSGSSRSTVGTIVDVAPLLRLLYSRVGQPSA 122 Query: 724 RGYTPGRFSFNVRGGRCEACQGDGVI 749 G +S N G C C G G I Sbjct: 123 GG--SMSYSPNHPAGMCPTCTGLGKI 146 >UniRef50_C5C6C3 ABC transporter related n=3 Tax=Actinomycetales RepID=C5C6C3_BEUC1 Length = 798 Score = 638 bits (1647), Expect = 0.0, Method: Composition-based stats. Identities = 275/857 (32%), Positives = 407/857 (47%), Gaps = 99/857 (11%) Query: 103 EIHDYLRLLFARVGEPRCPDHDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEH 162 + HD++R+ AR R D ++P TV V GK ++ A I E + Sbjct: 18 DAHDFIRVRGARENNLRDVDVEIPKRRLTVFTGVS-----GSGKSSLVFATIAAESRRLI 72 Query: 163 TKTLENLASQGYIRA--RIDGEVCD------LSDPPKLELQKKHTIEVVVDRFKVRDDLT 214 +T QG++ + R D +V + L D ++ + T+ V D + +L Sbjct: 73 DETYSTFV-QGFMPSLPRPDVDVLEGITTAILVDQERMGANVRSTVGTVTDANAMLRNLF 131 Query: 215 QRLAESF---ETALELSGGTAVVADMDDPKAEELLFSANFACPICGYSMRELEPRLFSFN 271 R+ + + TA + T S G + E+E ++ Sbjct: 132 SRIGDPYVGPPTAFSFNIPT----------------STASGVFSTGKAGGEVEKKVVRNQ 175 Query: 272 -NPAGACPTCDGLGVQQYFDPDRVIQNPELSLAGGAIRGWDRRNFYYFQMLKSLADHYKF 330 G CP C+G G D ++ + SL GAI + M+K ++ Sbjct: 176 VYLGGMCPECEGRGTVSDLDLSVIV-DESKSLHEGAILVPGYKAD--GWMVKGFSETGLL 232 Query: 331 DVEAPWGSLSANVHKVVLYGSGKENIEFKYMNDRGDTSIRRHPFEGVLHNMER----RYK 386 D + P + LY +E + K + ++G++ ++ R Sbjct: 233 DGDKPIRDYTDTERHDFLY---REKGKLKALG-------MNMTYQGLIPKLQESMFSRAP 282 Query: 387 ETESSAVREELAKFISNRPCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNL 446 E+ +R + + C +CEGTRL AR V + + M I A E+ + Sbjct: 283 ESLQPHIRAFVERAAVFVACPACEGTRLNDSARSAKVNGASIADVCRMQISDAAEWARGV 342 Query: 447 KLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLV 506 G ++ + V +GL YL+L R+A TLSGGEAQR ++ +G+ L Sbjct: 343 DDPG-----VAPLIGSLLHLFDKFVEIGLGYLSLDRAAGTLSGGEAQRTKMIRHLGSALT 397 Query: 507 GVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGV 566 V YV DEP+IGLH D ER+ L+ LRD GNTV+VVEH + I DHVID+GPGAG Sbjct: 398 DVTYVFDEPTIGLHPHDIERMNRLLLDLRDKGNTVLVVEHKPETIAVGDHVIDLGPGAGT 457 Query: 567 HGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEVPKKRVPANPEKVLKLTGARGNNLKDV 626 GG V EG +E + ++LTG+++ + + K P L++ GA NNL V Sbjct: 458 DGGTVCFEGTVEG-LRSSDTLTGRHLDDRTHV----KDSVRTPSGALEIRGASQNNLTGV 512 Query: 627 TLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAEPAPYRDIQGLEHFDKVI 686 + +P G+ T +TGV+GSGKS+LI+ L D V+ Sbjct: 513 DVDVPTGVLTVVTGVAGSGKSSLIHGNLAGR-------------------------DGVV 547 Query: 687 DIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESRARGYTPGRFSFNVRGGRCEACQGD 746 +DQ I + RSNPATYTG+ P+R+ FA +A P FS N G C C+G+ Sbjct: 548 VVDQGAIKGSRRSNPATYTGLLEPIRKAFA-----KANDVKPALFSSNSEGA-CPTCKGN 601 Query: 747 GVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDA---- 802 G I E+ F+ + PC+ C GKR+ LE G I EVLD+++ +A FF Sbjct: 602 GRIYTELGFMETVETPCEDCGGKRFMASVLEYTLGGLNIAEVLDLSVAQAHAFFREGEAK 661 Query: 803 VPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTG 862 +PA + L L DVGL YI+LGQ TLSGGE QR+KLA E+ + G ++Y+LDEPTTG Sbjct: 662 IPAAHKILARLEDVGLGYIKLGQPLNTLSGGERQRLKLAMEMGESG---SVYVLDEPTTG 718 Query: 863 LHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPE 922 LH AD++ LL +L +L D G ++VVIEH+ V+ ADWI+DLGP G GG ++ G P Sbjct: 719 LHLADVENLLALLDRLVDGGKSVVVIEHHQAVMAHADWIIDLGPGAGHDGGRVVFEGAPA 778 Query: 923 TVAECEASHTARFLKPM 939 + ++ T L Sbjct: 779 DLVAARSTLTGEHLADY 795 Score = 174 bits (442), Expect = 1e-41, Method: Composition-based stats. Identities = 55/118 (46%), Positives = 84/118 (71%) Query: 2 DKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYA 61 D I VRGAR +NL+++++ IP+ +L V TG+SGSGKSSL F T+ AE +R E+ S + Sbjct: 21 DFIRVRGARENNLRDVDVEIPKRRLTVFTGVSGSGKSSLVFATIAAESRRLIDETYSTFV 80 Query: 62 RQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPR 119 + F+ + +PDVD +EG++ AI ++Q+ N RSTVGT+T+ + LR LF+R+G+P Sbjct: 81 QGFMPSLPRPDVDVLEGITTAILVDQERMGANVRSTVGTVTDANAMLRNLFSRIGDPY 138 Score = 105 bits (263), Expect = 6e-21, Method: Composition-based stats. Identities = 49/179 (27%), Positives = 73/179 (40%), Gaps = 36/179 (20%) Query: 606 PANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGA 665 A+ +++ GAR NNL+DV + +P T TGVSGSGKS+L+ T+ ++R ++ Sbjct: 16 AADAHDFIRVRGARENNLRDVDVEIPKRRLTVFTGVSGSGKSSLVFATIAAESRRLIDET 75 Query: 666 TIA------EPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVP 719 P D+ LE I +DQ +G RS T T +R LF+ + Sbjct: 76 YSTFVQGFMPSLPRPDVDVLEGITTAILVDQERMGANVRSTVGTVTDANAMLRNLFSRIG 135 Query: 720 ESRARGYTPGRFSFNVR----------------------------GGRCEACQGDGVIK 750 + T FSFN+ GG C C+G G + Sbjct: 136 DPYVGPPTA--FSFNIPTSTASGVFSTGKAGGEVEKKVVRNQVYLGGMCPECEGRGTVS 192 Score = 76.1 bits (186), Expect = 6e-12, Method: Composition-based stats. Identities = 36/160 (22%), Positives = 58/160 (36%), Gaps = 45/160 (28%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 63 +E+RGA +NL +++ +P L VVTG++GSGKSSL L Sbjct: 499 LEIRGASQNNLTGVDVDVPTGVLTVVTGVAGSGKSSLIHGNLA----------------- 541 Query: 64 FLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGE------ 117 G + ++Q + + RS T T + + +R FA+ + Sbjct: 542 --------------GRDGVVVVDQGAIKGSRRSNPATYTGLLEPIRKAFAKANDVKPALF 587 Query: 118 --------PRCPDHDVPLAAQTVSQMVDNVLSQPEGKRLM 149 P C + + V+ GKR M Sbjct: 588 SSNSEGACPTCKGNGRIYTELGFMETVETPCEDCGGKRFM 627 >UniRef50_Q039P8 Excinuclease ATPase subunit n=56 Tax=Bacteria RepID=Q039P8_LACC3 Length = 760 Score = 634 bits (1636), Expect = e-180, Method: Composition-based stats. Identities = 255/815 (31%), Positives = 401/815 (49%), Gaps = 101/815 (12%) Query: 133 SQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARIDGEVCDLSDPPKL 192 + V GK ++ I E + E +T + Q Y+ +V + P Sbjct: 27 DAISVFVGRSGSGKSSLVFDTIAAESRRELNETFPSFTQQ-YLPKYGQPDVGQIDHLP-- 83 Query: 193 ELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVADMDDPKAEELLFSANFA 252 + +VV++ ++ + LA + L + Sbjct: 84 -------VAIVVEQKRIGKNARSTLA-----------------TYTGIYSLLRLLFSRAG 119 Query: 253 CPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPELSLAGGAI----- 307 P GYS FSFN P G C TC GLG D ++I +P SL GAI Sbjct: 120 KPFIGYS------DTFSFNLPQGMCKTCQGLGYVDDIDVKKLI-DPNKSLNQGAITFVSF 172 Query: 308 --RGWDRRNFYYFQMLKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKENIEFKYMNDRG 365 W + + Y + FD + G + +LY + ++ Sbjct: 173 GPDTWRWKRYAYSGL---------FDNDKRLGDYTKQEMDTLLYAPQQ------TLDHAP 217 Query: 366 DTSIRRHPFEGVLHNMERRYK-ETESSAVREELAKFISNRPCASCEGTRLRREARHVYVE 424 + +EGV+ + R + E+ + LA+ ++ PC +C GTRLR E + Sbjct: 218 TKWPKTALYEGVVPRIRRSIIGKKEAEHHKTALAEIVTRMPCPTCHGTRLRPEVLTCLIN 277 Query: 425 NTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTLSRSA 484 T + + M + F N G + + + +++E+ ++ L+++GL YL+L R Sbjct: 278 QTNIAQVLQMDLVKVRHFLN-----GIQEPLVQDVIRELLRKIDSLIDIGLGYLSLDRPT 332 Query: 485 ETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVV 544 ETLSGGE QRI++A + + LV ++Y+LDEPS+GLH D E + ++ L++ GNT+++V Sbjct: 333 ETLSGGETQRIKIAKFLTSALVDMVYILDEPSVGLHPHDIELIKRAILRLKEKGNTILIV 392 Query: 545 EHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEVPKKR 604 EH+ I D+++++GPGAG GG + G +A++ ++LTG+ + R Sbjct: 393 EHNPALIAIGDNIVEVGPGAGTTGGHITFTGTYQALLD-SDTLTGKLLKQPLTF-----R 446 Query: 605 VPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNG 664 P + L +NLKDV++ +P+G+ T I+GV+GSGKSTL++ + QL Sbjct: 447 QPRPATSTISLQHIHRHNLKDVSVAVPLGIETVISGVAGSGKSTLVS-----ALRDQLTA 501 Query: 665 ATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESRAR 724 ID+ Q+ IG RS PATY + P+R++FA A Sbjct: 502 P-------------------YIDLAQADIGANIRSAPATYLSILDPIRKVFAD-----AN 537 Query: 725 GYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKYKGKT 784 FS+N RG C C+G GV M F+ + C+QC G+RYN + L Y K Sbjct: 538 HVASSWFSYNGRGA-CPRCKGKGVTITNMAFMDPVVQTCEQCHGRRYNDQALSYTYHDKN 596 Query: 785 IHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLAREL 844 I +VL M I +A+ FF VPA+A L+ + VGL Y+ LGQ TTLSGGE QR+KLA EL Sbjct: 597 ISDVLRMPITKAQNFFTDVPAIAAPLRNMARVGLDYLTLGQPLTTLSGGEKQRLKLAVEL 656 Query: 845 SKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADWIVDL 904 ++ G TLY+LDEPT GLH D+++L+ + +L GN+++++EHNL+VI ADW++D+ Sbjct: 657 NRTG---TLYLLDEPTAGLHLQDVKKLIQLFDELVADGNSLIIVEHNLEVISQADWLIDM 713 Query: 905 GPEGGSGGGEILVSGTPETVAECEASHTARFLKPM 939 GP+ G GG++ +GTPE + S T + +K Sbjct: 714 GPDAGIYGGQVRYTGTPENSMTVKQSRTGQAMKQY 748 Score = 182 bits (461), Expect = 9e-44, Method: Composition-based stats. Identities = 68/197 (34%), Positives = 102/197 (51%), Gaps = 16/197 (8%) Query: 403 NRPCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKE 462 + C C G R +A + + + M I A FF ++ Sbjct: 572 VQTCEQCHGRRYNDQALSYTYHDKNISDVLRMPITKAQNFFTDVP--------------A 617 Query: 463 IGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQR 522 I L+ + VGL+YLTL + TLSGGE QR++LA ++ G +Y+LDEP+ GLH + Sbjct: 618 IAAPLRNMARVGLDYLTLGQPLTTLSGGEKQRLKLAVELNR--TGTLYLLDEPTAGLHLQ 675 Query: 523 DNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMA 582 D ++L+ L GN++I+VEH+ + I AD +ID+GP AG++GG+V G E M Sbjct: 676 DVKKLIQLFDELVADGNSLIIVEHNLEVISQADWLIDMGPDAGIYGGQVRYTGTPENSMT 735 Query: 583 VPESLTGQYMSGKRKIE 599 V +S TGQ M + Sbjct: 736 VKQSRTGQAMKQYNQAP 752 Score = 173 bits (440), Expect = 2e-41, Method: Composition-based stats. Identities = 54/116 (46%), Positives = 75/116 (64%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 63 IEV A +NL+++N+ IP+D + V G SGSGKSSL FDT+ AE +R E+ ++ +Q Sbjct: 7 IEVHDANQNNLQHVNVKIPKDAISVFVGRSGSGKSSLVFDTIAAESRRELNETFPSFTQQ 66 Query: 64 FLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPR 119 +L +PDV I+ L AI +EQK N RST+ T T I+ LRLLF+R G+P Sbjct: 67 YLPKYGQPDVGQIDHLPVAIVVEQKRIGKNARSTLATYTGIYSLLRLLFSRAGKPF 122 Score = 117 bits (293), Expect = 2e-24, Method: Composition-based stats. Identities = 48/145 (33%), Positives = 78/145 (53%), Gaps = 8/145 (5%) Query: 611 KVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAEP 670 +++ A NNL+ V + +P + G SGSGKS+L+ DT+ ++R+LN + Sbjct: 5 GFIEVHDANQNNLQHVNVKIPKDAISVFVGRSGSGKSSLVFDTIAAESRRELNETFPSFT 64 Query: 671 APYR------DIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESRAR 724 Y D+ ++H I ++Q IG+ RS ATYTG+++ +R LF+ + Sbjct: 65 QQYLPKYGQPDVGQIDHLPVAIVVEQKRIGKNARSTLATYTGIYSLLRLLFSRAGKPFI- 123 Query: 725 GYTPGRFSFNVRGGRCEACQGDGVI 749 GY+ FSFN+ G C+ CQG G + Sbjct: 124 GYS-DTFSFNLPQGMCKTCQGLGYV 147 Score = 69.6 bits (169), Expect = 6e-10, Method: Composition-based stats. Identities = 37/159 (23%), Positives = 57/159 (35%), Gaps = 44/159 (27%) Query: 3 KIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYAR 62 I ++ HNLK++++ +P V++G++GSGKS+L + R Sbjct: 454 TISLQHIHRHNLKDVSVAVPLGIETVISGVAGSGKSTLV-----------------SALR 496 Query: 63 QFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFA--------- 113 L+ +P I + Q N RS T I D +R +FA Sbjct: 497 DQLT-------------APYIDLAQADIGANIRSAPATYLSILDPIRKVFADANHVASSW 543 Query: 114 -----RVGEPRCPDHDVPLAAQTVSQMVDNVLSQPEGKR 147 R PRC V + V Q G+R Sbjct: 544 FSYNGRGACPRCKGKGVTITNMAFMDPVVQTCEQCHGRR 582 >UniRef50_A6VRX7 ABC transporter related n=4 Tax=Bacteria RepID=A6VRX7_MARMS Length = 761 Score = 632 bits (1631), Expect = e-179, Method: Composition-based stats. Identities = 250/719 (34%), Positives = 367/719 (51%), Gaps = 66/719 (9%) Query: 228 SGGTAVVADMDDPKAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQ 287 + V D + L + P GYS +FSFN+P G CPTC GLG+ Sbjct: 99 GNARSTVGTATDIQPLLRLLFSRLGEPFVGYS------NVFSFNHPQGMCPTCQGLGMVD 152 Query: 288 YFDPDRVIQNPELSLAGGAIRG--WDRRNFYYFQMLKSLADHYKFDVEAPWGSLSANVHK 345 FD D V+ + SL GAIR + R F + K A FD + P +A+ + Sbjct: 153 EFDLD-VMFDRSKSLNQGAIRFPTFARGTFRW----KRYAYSGLFDCDKPLADYTADEWQ 207 Query: 346 VVLYGSGKENIEFKYMNDRGDTSIRRHPFEGVLHNMERRYKETE----SSAVREELAKFI 401 +LY + +S R F+GV+ R Y + E + A RE LA I Sbjct: 208 TLLYADD---LAVSNPLPGWPSSAR---FQGVVPRFRRAYLDHEPSRLTKAEREGLAHVI 261 Query: 402 SNRPCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILK 461 + + C +C G RL ++ + ++ I + F + ++ +L Sbjct: 262 TRQRCQACGGARLNPTILSCKIKGKSIADCGNLEISDLLLFIRTID-----SEAIATVLT 316 Query: 462 EIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQ 521 I +RL+ + +GL+YL+L R +LSGGE+QR+++ +G+ L + Y+ DEPS+GLH Sbjct: 317 AIIERLEQMRAIGLDYLSLGRETASLSGGESQRVKMVRHLGSSLADIAYIFDEPSVGLHP 376 Query: 522 RDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIM 581 D +L L LRD GNTV+VVEHD D I ADHV+D+GPGAG GG VV +G + Sbjct: 377 SDVHQLNTLLRSLRDKGNTVLVVEHDPDVIAIADHVVDMGPGAGKDGGHVVYQGDYAGLR 436 Query: 582 AVPESLTGQYMSGKRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGV 641 ++LTG+Y+ P R P + + L +NL+DV +++P G+ T +TGV Sbjct: 437 QA-DTLTGRYLLR----ATPMIREPRSATGQIALQHLSLHNLQDVNVSIPTGVLTVVTGV 491 Query: 642 SGSGKSTLINDTLFPIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNP 701 +GSGKSTL+N L L H I IDQ +G T RS+ Sbjct: 492 AGSGKSTLVNRLL------------------------LRHCPDAILIDQKSLGGTRRSSV 527 Query: 702 ATYTGVFTPVRELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYV 761 ++YTGV +R F ++A G FS N G C AC+G G+I ++ F+ + Sbjct: 528 SSYTGVLDEIRSGF-----TKASGQPASLFS-NNAQGACPACKGLGLIHTDLAFMDSVET 581 Query: 762 PCDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYI 821 PCD C +N I + G I +VL ++E+A F A + L L +VGL Y+ Sbjct: 582 PCDACSATGFNEAARAITWMGCNIAQVLAFSVEQALRHFQAYQEIVEPLHRLSNVGLGYL 641 Query: 822 RLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQ 881 LGQ TLSGGE QR+KLA L++ G +LY+ DEPT+GLH +D+ +LL +L L + Sbjct: 642 SLGQRLNTLSGGERQRLKLACRLAEEG---SLYVFDEPTSGLHMSDVDRLLTILDDLTQR 698 Query: 882 GNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLKPML 940 G T++V+EHNLDV+ ADW++++GP G GG+++ G P + S T FL+ L Sbjct: 699 GATVIVVEHNLDVMAHADWLIEMGPGAGKKGGKVIFEGLPTAMISASKSVTGPFLRHHL 757 Score = 177 bits (450), Expect = 2e-42, Method: Composition-based stats. Identities = 62/168 (36%), Positives = 88/168 (52%), Gaps = 20/168 (11%) Query: 3 KIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYAR 62 +E+ GAR +NL+++ + +P+ + V TG+SGSGKSSL FDT+ AE QR+ ES SA+ R Sbjct: 10 DMEIIGARNNNLRSVTVKVPKHCITVFTGVSGSGKSSLVFDTIAAESQRQLNESHSAFIR 69 Query: 63 QFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPR--- 119 L +P D + L +I ++QK N RSTVGT T+I LRLLF+R+GEP Sbjct: 70 HRLPHYGQPQADALCNLPASIVVDQKPLGGNARSTVGTATDIQPLLRLLFSRLGEPFVGY 129 Query: 120 ------------CPDHDVP--LAAQTVSQMVDNVLSQPEGKRLMLLAP 153 CP + + M D S +G + P Sbjct: 130 SNVFSFNHPQGMCPTCQGLGMVDEFDLDVMFDRSKSLNQGA---IRFP 174 Score = 158 bits (401), Expect = 7e-37, Method: Composition-based stats. Identities = 71/195 (36%), Positives = 102/195 (52%), Gaps = 16/195 (8%) Query: 403 NRPCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKE 462 PC +C T AR + + + S+ A+ F + E Sbjct: 580 ETPCDACSATGFNEAARAITWMGCNIAQVLAFSVEQALRHFQAYQ--------------E 625 Query: 463 IGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQR 522 I + L L NVGL YL+L + TLSGGE QR++LA ++ G +YV DEP+ GLH Sbjct: 626 IVEPLHRLSNVGLGYLSLGQRLNTLSGGERQRLKLACRLAEE--GSLYVFDEPTSGLHMS 683 Query: 523 DNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMA 582 D +RLL L L G TVIVVEH+ D + AD +I++GPGAG GG+V+ EG A+++ Sbjct: 684 DVDRLLTILDDLTQRGATVIVVEHNLDVMAHADWLIEMGPGAGKKGGKVIFEGLPTAMIS 743 Query: 583 VPESLTGQYMSGKRK 597 +S+TG ++ Sbjct: 744 ASKSVTGPFLRHHLT 758 Score = 118 bits (295), Expect = 2e-24, Method: Composition-based stats. Identities = 56/152 (36%), Positives = 80/152 (52%), Gaps = 11/152 (7%) Query: 613 LKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAEPAP 672 +++ GAR NNL+ VT+ +P T TGVSGSGKS+L+ DT+ +QRQLN + A Sbjct: 11 MEIIGARNNNLRSVTVKVPKHCITVFTGVSGSGKSSLVFDTIAAESQRQLNESHSAFIRH 70 Query: 673 YRDIQGLEHFDKV------IDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESRARGY 726 G D + I +DQ P+G RS T T + +R LF+ + E GY Sbjct: 71 RLPHYGQPQADALCNLPASIVVDQKPLGGNARSTVGTATDIQPLLRLLFSRLGEPFV-GY 129 Query: 727 TPGRFSFNVRGGRCEACQGDGVI---KVEMHF 755 + FSFN G C CQG G++ +++ F Sbjct: 130 SN-VFSFNHPQGMCPTCQGLGMVDEFDLDVMF 160 Score = 81.1 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 35/132 (26%), Positives = 53/132 (40%), Gaps = 41/132 (31%) Query: 3 KIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYAR 62 +I ++ HNL+++N+ IP L VVTG++GSGKS+L L Sbjct: 462 QIALQHLSLHNLQDVNVSIPTGVLTVVTGVAGSGKSTLVNRLL----------------- 504 Query: 63 QFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLR-----------LL 111 + AI I+QKS RS+V + T + D +R L Sbjct: 505 -------------LRHCPDAILIDQKSLGGTRRSSVSSYTGVLDEIRSGFTKASGQPASL 551 Query: 112 FARVGEPRCPDH 123 F+ + CP Sbjct: 552 FSNNAQGACPAC 563 >UniRef50_C2HBQ4 Excinuclease subunit A n=4 Tax=Enterococcus faecium RepID=C2HBQ4_ENTFC Length = 743 Score = 631 bits (1628), Expect = e-179, Method: Composition-based stats. Identities = 257/712 (36%), Positives = 380/712 (53%), Gaps = 66/712 (9%) Query: 228 SGGTAVVADMDDPKAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQ 287 + + D +A + + FA P GY +SFN+P G CP C G+G Sbjct: 93 GNARSTLGTATDIQALFRILFSRFAEPPLGY------ANAYSFNDPQGMCPVCQGIGKTI 146 Query: 288 YFDPDRVIQNPELSLAGGAIR-GWDRRNFYYFQMLKSLADHYKFDVEAPWGSLSANVHKV 346 + D + + SL GAI +Y++M A+ FD P ++ + Sbjct: 147 TLNIDAAV-DVTRSLNEGAILLPNFTVGTWYWKM---YAETGLFDPNKPISEYTSEEYDR 202 Query: 347 VLYGSGKENIEFKYMNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREE---LAKFISN 403 +LYG E I D +EG++ R TE ++ L + Sbjct: 203 LLYGKA-ERINIPSAGD------MNVTYEGIVTRFMRTNVHTEKETTKKTAKVLETYTKM 255 Query: 404 RPCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEI 463 C C+G R E + + + ++ + ++ L + IA I Sbjct: 256 DTCPECQGKRFSHEVLNSKINGYNIYDLTAKELSSLLQILETLDNKERHPLIA-----SI 310 Query: 464 GDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRD 523 R++ L+++GL Y+TL+R +LSGGE+QR+++ Q+ + L +MY+ DEPS GLH RD Sbjct: 311 KKRIQDLIDIGLGYMTLTRETSSLSGGESQRVKMVKQLASSLTNMMYIFDEPSTGLHPRD 370 Query: 524 NERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAV 583 L L +RD GNTV+VVEHD D I+ ADH++D+GP AG HGGE++ G + ++ Sbjct: 371 VHLLNDLLKKIRDEGNTVLVVEHDPDVIKVADHIVDVGPYAGSHGGEIMYTGDYDGLLD- 429 Query: 584 PESLTGQYMSGKRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSG 643 +LTG Y+ + I KK V E + + +NLK++ L +P G+FT ++GV+G Sbjct: 430 SGTLTGNYLRHQLPI---KKEVRTFSETFIS-RQSSLHNLKNIRLEIPKGVFTVVSGVAG 485 Query: 644 SGKSTLINDTLFPIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPAT 703 SGKSTL+N L+ F + + IDQ+PI RSNPAT Sbjct: 486 SGKSTLVNQVF------------------------LKDFPESLLIDQNPIHTNKRSNPAT 521 Query: 704 YTGVFTPVRELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPC 763 ++G+ +R+ F + G FS+N +G C C G GVI++ + F+ + V C Sbjct: 522 FSGIMNNIRKAF-----GKENQVDAGYFSYNSKGA-CPECNGMGVIELNLSFMDESEVVC 575 Query: 764 DQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRL 823 C GKRY+ L+ +Y+GK I EV+DMTIEEA EFFD + RKL+ L +VG+ Y+ L Sbjct: 576 SNCHGKRYDPAVLDYRYRGKNIVEVMDMTIEEALEFFDE-KEIQRKLENLEEVGIGYLTL 634 Query: 824 GQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGN 883 GQ TLSGGEAQR+KLA EL T +YILDEPTTGLH +D++ ++ +++ L D+GN Sbjct: 635 GQPMDTLSGGEAQRLKLANEL---KTNGQIYILDEPTTGLHMSDVENVIRIINNLVDKGN 691 Query: 884 TIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARF 935 T++VIEHNLDVI++ADWI+DLGPEGGSGGG IL G P + + + T + Sbjct: 692 TVIVIEHNLDVIRSADWIIDLGPEGGSGGGNILYEGIPGGL-KNAQTITGNY 742 Score = 176 bits (446), Expect = 4e-42, Method: Composition-based stats. Identities = 65/169 (38%), Positives = 91/169 (53%), Gaps = 20/169 (11%) Query: 2 DKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYA 61 + IE+ AR +NLKNI+L IP++K+ + TG+SGSGKSS+ FDT+ E R+ E+ +++A Sbjct: 3 EYIELIHARENNLKNIDLRIPKNKITIFTGVSGSGKSSIVFDTIAQEAGRQLNETFNSFA 62 Query: 62 RQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEP--- 118 R FL +PD+D I+ LS A+ I QK N RST+GT T+I R+LF+R EP Sbjct: 63 RNFLPKYSRPDIDEIKHLSTAVLINQKKLGGNARSTLGTATDIQALFRILFSRFAEPPLG 122 Query: 119 ------------RCPDHD--VPLAAQTVSQMVDNVLSQPEGKRLMLLAP 153 CP + VD S EG +L P Sbjct: 123 YANAYSFNDPQGMCPVCQGIGKTITLNIDAAVDVTRSLNEGA---ILLP 168 Score = 107 bits (268), Expect = 2e-21, Method: Composition-based stats. Identities = 53/157 (33%), Positives = 76/157 (48%), Gaps = 9/157 (5%) Query: 610 EKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAE 669 + ++L AR NNLK++ L +P T TGVSGSGKS+++ DT+ A RQLN + Sbjct: 2 TEYIELIHARENNLKNIDLRIPKNKITIFTGVSGSGKSSIVFDTIAQEAGRQLNETFNSF 61 Query: 670 PAPYR------DIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESRA 723 + DI ++H + I+Q +G RS T T + R LF+ E Sbjct: 62 ARNFLPKYSRPDIDEIKHLSTAVLINQKKLGGNARSTLGTATDIQALFRILFSRFAEPPL 121 Query: 724 RGYTPGRFSFNVRGGRCEACQGDG-VIKVEMHFLPDI 759 GY +SFN G C CQG G I + + D+ Sbjct: 122 -GY-ANAYSFNDPQGMCPVCQGIGKTITLNIDAAVDV 156 Score = 70.0 bits (170), Expect = 5e-10, Method: Composition-based stats. Identities = 31/129 (24%), Positives = 49/129 (37%), Gaps = 41/129 (31%) Query: 7 RGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQFLS 66 R + HNLKNI L IP+ VV+G++GSGKS+L + + F Sbjct: 458 RQSSLHNLKNIRLEIPKGVFTVVSGVAGSGKSTLVNQV---------------FLKDF-- 500 Query: 67 LMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEP-------- 118 ++ I+Q N RS T + I + +R F + + Sbjct: 501 -------------PESLLIDQNPIHTNKRSNPATFSGIMNNIRKAFGKENQVDAGYFSYN 547 Query: 119 ---RCPDHD 124 CP+ + Sbjct: 548 SKGACPECN 556 >UniRef50_C7PP78 ABC transporter related n=6 Tax=Bacteria RepID=C7PP78_CHIPD Length = 754 Score = 630 bits (1624), Expect = e-178, Method: Composition-based stats. Identities = 246/716 (34%), Positives = 370/716 (51%), Gaps = 62/716 (8%) Query: 228 SGGTAVVADMDDPKAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQ 287 + V D A L + P GYS +FSFN+P G CPTC+GLG Sbjct: 96 GNARSTVGTATDIYASLRLLFSRMGNPFVGYS------SIFSFNHPQGMCPTCEGLGFIS 149 Query: 288 YFDPDRVIQNPELSLAGGAIRGWDRRNFYYFQMLKSLADHYKFDVEAPWGSLSANVHKVV 347 + D ++ + + SL G I + Y + A FD + S Sbjct: 150 TINTDALL-DKDKSLNEGPILFPTFQPGGYRWI--RYAHSGYFDRDKKLRDYSKKEL--- 203 Query: 348 LYGSGKENIEFKYMNDRGDTSIRRHPFEGVLHNMERRYKETESSAV---REELAKFISNR 404 E + + + G+L ++ + + ES ++EL K I+ Sbjct: 204 ---ELLLYAEEHKPPHPDKSWGKTMQYIGLLPRIKNDFLKKESKEHHLRKKELQKIINTV 260 Query: 405 PCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIG 464 C C+G RL + ++ + S M +G + F + L +K I E+ Sbjct: 261 SCPDCKGKRLNKTVLSCKIKGMDIADCSAMPVGELLAFIHTLS-----SKSFSAIRYELQ 315 Query: 465 DRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDN 524 +L+ +V +GL YLTL R+ +TLSGGE+QRI++ +G + ++Y+ DEPSIGLH +D Sbjct: 316 KKLENVVTIGLQYLTLDRTTDTLSGGESQRIKMVRHLGNSIEDLLYIFDEPSIGLHAKDL 375 Query: 525 ERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVP 584 + + + +++ GN+V++VEHD D I+ ADHVID+GP +GVHGGE++ EG + ++A Sbjct: 376 DNISKIIRKIKEKGNSVLIVEHDPDIIKIADHVIDVGPLSGVHGGEIIYEGSFKGLLASK 435 Query: 585 ESLTGQYMSGKRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGS 644 TG+Y S KR + P + +++ A NLK++T+ +P + T +TGV+GS Sbjct: 436 GK-TGKYFSQKRT----YRDNPRTAQTSIRIENASLFNLKNITVDIPRNVLTVVTGVAGS 490 Query: 645 GKSTLINDTLFPIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATY 704 GKSTLI L +V I+QSPI + RS TY Sbjct: 491 GKSTLIGKVLPL------------------------QLPEVKIINQSPITGSQRSTLLTY 526 Query: 705 TGVFTPVRELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCD 764 + +R LFA + R FS N G C C+G GV K+++ F+ DI PCD Sbjct: 527 LDLSDKLRRLFASANKVSDR-----LFSTNS-LGACPDCKGLGVEKIDLAFMDDIEQPCD 580 Query: 765 QCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLG 824 C G ++ + L+ K+ K I EVL++T+EEA FF+ + + L+ +GL Y++LG Sbjct: 581 VCHGTGFDPKVLKYKFLHKNIAEVLNLTVEEAMTFFEQYDFVTH-FELLIALGLGYLKLG 639 Query: 825 QSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNT 884 Q +T SGGE QR+KL+ EL+ + +LDEP+TGLH AD QLL VL +L +QGNT Sbjct: 640 QRLSTFSGGERQRLKLSAELA---EANKILVLDEPSTGLHPADTGQLLQVLDRLVEQGNT 696 Query: 885 IVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLKPML 940 ++VIEHNLDVI ADWI+D+GP G GGE++ G + E + S TA++LK L Sbjct: 697 VIVIEHNLDVIAQADWILDIGPGAGKYGGELVFQGNVRQLLENKVSETAKYLKQHL 752 Score = 185 bits (471), Expect = 5e-45, Method: Composition-based stats. Identities = 72/188 (38%), Positives = 100/188 (53%), Gaps = 24/188 (12%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 63 I+V GAR +NLKNI+L IP+ +++V TG+SGSGKSSL F+T+ AE QR+ E+ ++ R Sbjct: 8 IKVSGARQNNLKNISLEIPKGRIVVFTGVSGSGKSSLVFETIGAEAQRQVNETQHSFTRN 67 Query: 64 FLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPR---- 119 LS + PDVD IE L+ + I QK N RSTVGT T+I+ LRLLF+R+G P Sbjct: 68 RLSHLGIPDVDKIEHLNVPVIISQKRIGGNARSTVGTATDIYASLRLLFSRMGNPFVGYS 127 Query: 120 -----------CPDHDVP--LAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTL 166 CP + ++ ++D S EG +L P + Sbjct: 128 SIFSFNHPQGMCPTCEGLGFISTINTDALLDKDKSLNEGP---ILFPTFQPGGYRWI--- 181 Query: 167 ENLASQGY 174 A GY Sbjct: 182 -RYAHSGY 188 Score = 131 bits (331), Expect = 1e-28, Method: Composition-based stats. Identities = 53/150 (35%), Positives = 79/150 (52%), Gaps = 8/150 (5%) Query: 608 NPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATI 667 + +++K++GAR NNLK+++L +P G TGVSGSGKS+L+ +T+ AQRQ+N Sbjct: 3 SNNRMIKVSGARQNNLKNISLEIPKGRIVVFTGVSGSGKSSLVFETIGAEAQRQVNETQH 62 Query: 668 AEPAPYRDIQGLEHFDKV------IDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPES 721 + G+ DK+ + I Q IG RS T T ++ +R LF+ + Sbjct: 63 SFTRNRLSHLGIPDVDKIEHLNVPVIISQKRIGGNARSTVGTATDIYASLRLLFSRMGNP 122 Query: 722 RARGYTPGRFSFNVRGGRCEACQGDGVIKV 751 GY+ FSFN G C C+G G I Sbjct: 123 FV-GYS-SIFSFNHPQGMCPTCEGLGFIST 150 Score = 81.5 bits (200), Expect = 2e-13, Method: Composition-based stats. Identities = 46/181 (25%), Positives = 69/181 (38%), Gaps = 47/181 (25%) Query: 3 KIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYAR 62 I + A NLKNI + IPR+ L VVTG++GSGKS+L L Sbjct: 458 SIRIENASLFNLKNITVDIPRNVLTVVTGVAGSGKSTLIGKVL----------------- 500 Query: 63 QFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPR--- 119 ++ P+V I Q + + RST+ T ++ D LR LFA + Sbjct: 501 ----PLQLPEVK---------IINQSPITGSQRSTLLTYLDLSDKLRRLFASANKVSDRL 547 Query: 120 --------CPDH-DVPLAAQTVSQM--VDNVLSQPEGKRLMLLAPIIKERKGEHTKTLEN 168 CPD + + ++ M ++ G P + + K H E Sbjct: 548 FSTNSLGACPDCKGLGVEKIDLAFMDDIEQPCDVCHGTGFD---PKVLKYKFLHKNIAEV 604 Query: 169 L 169 L Sbjct: 605 L 605 >UniRef50_A6CCN1 Excinuclease ABC subunit A n=1 Tax=Planctomyces maris DSM 8797 RepID=A6CCN1_9PLAN Length = 873 Score = 620 bits (1598), Expect = e-175, Method: Composition-based stats. Identities = 242/548 (44%), Positives = 336/548 (61%), Gaps = 7/548 (1%) Query: 398 AKFISNRPCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLK--LAGQRAKI 455 + S C C+G+RL A V V + + + I + L K Sbjct: 327 SGGRSAETCPHCQGSRLNASALAVRVNGSNIDQLGQQPIQQIGAWLEQFSEGLTATETKP 386 Query: 456 AEKILKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEP 515 +L+EI +RL L +GL YLTL+R+ TLS GE QR L S + + LV +YVLDEP Sbjct: 387 LAPLLREIRERLSLLNELGLGYLTLNRTRSTLSSGEIQRTALTSLLSSNLVNTLYVLDEP 446 Query: 516 SIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEG 575 S GLH D+ R+L L LR L NT+++VEHD IRAA++VI++GP AG GGEV+ G Sbjct: 447 SSGLHPADSHRVLTVLQKLRQLNNTLLIVEHDAAFIRAAEYVIELGPAAGRAGGEVIFSG 506 Query: 576 PLEAIMAVPESLTGQYMSGKRKIEVPKKRVPANP-EKVLKLTGARGNNLKDVTLTLPVGL 634 PLEA++A S T ++++ + K VP P + + LT A NNL+++T+ P+ Sbjct: 507 PLEALLASNSSPTSRFLNTAENRAL--KSVPDQPTSEWITLTDASRNNLQNITVKFPLRQ 564 Query: 635 FTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAEPAP-YRDIQGLEHFDKVIDIDQSPI 693 + +TG+SGSGKS+LI TLFP+ +L+ + A + + G E D+VI +D S Sbjct: 565 LSVVTGISGSGKSSLIEQTLFPLLAAELSETGTSPLADGCQSLSGAEQIDEVILLDHSFT 624 Query: 694 GRTPRSNPATYTGVFTPVRELFAGVPESRARGYTPGRFSFNVR-GGRCEACQGDGVIKVE 752 G+ PRS PATY +F +R +FA P++R R +PG FSFN + GGRC C+G G I+++ Sbjct: 625 GQNPRSIPATYLNLFDDIRSIFAQTPDARLRNLSPGHFSFNSKSGGRCPVCKGTGKIEID 684 Query: 753 MHFLPDIYVPCDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQT 812 + FL DI + C +C GKRY RE LEIKY+ I EVL +T++EA FF PAL +KL+ Sbjct: 685 LQFLADISMDCQECHGKRYQRELLEIKYRKLNIAEVLKLTVDEAFPFFRGQPALQKKLKQ 744 Query: 813 LMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLL 872 L DVGL Y+ LGQ TLSGGE QR+KLA L+ +TL++++EPT GLH DIQ +L Sbjct: 745 LKDVGLGYLPLGQPLPTLSGGECQRLKLAAYLNTSSRNKTLFLMNEPTRGLHPLDIQSVL 804 Query: 873 DVLHKLRDQGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHT 932 + H L G++I++IEHNLD+I+ AD I+DLGPEGG+ GG I+V+GTP VA S+T Sbjct: 805 NCFHYLLTAGHSIILIEHNLDLIRAADHIIDLGPEGGAEGGRIVVTGTPAEVAAHPTSYT 864 Query: 933 ARFLKPML 940 L Sbjct: 865 GMALNAKF 872 Score = 310 bits (795), Expect = 2e-82, Method: Composition-based stats. Identities = 115/308 (37%), Positives = 165/308 (53%), Gaps = 24/308 (7%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 63 I+VRG R HNLK+I+L IP ++LI V G+SGSGK+SLAFDTLYAEGQRRY+E+LS ARQ Sbjct: 18 IQVRGVRVHNLKSIDLDIPLNQLIAVCGVSGSGKTSLAFDTLYAEGQRRYLETLSPSARQ 77 Query: 64 FLSLMEKPDVDHIEGLSPAISIEQKS-----TSHNPRSTVGTITEIHDYLRLLFARVGEP 118 +L+ + KPD D I + PAI++ Q + TS +T G + I YLRLLF+ G+ Sbjct: 78 YLNQLPKPDADQITQIPPAIALRQNTSQRHFTSRGLETTAGIESGIQHYLRLLFSASGQI 137 Query: 119 RCPDHDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRAR 178 CPD ++P++ Q+ ++ + + P R + P+ E + ++ L QG R Sbjct: 138 FCPDCEIPISPQSPETVLAFIKTLPTDLRFQICYPVTTEEHSSP-EIMQELKQQGLNRVI 196 Query: 179 IDGEVCDLSDPPKLELQK----KHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVV 234 ++ E LSD L + H I VV+DR R R+ ES E A S G + Sbjct: 197 LNHEEYQLSDDLTEPLSQFDTNTHEILVVLDRLSTRSFDDSRILESLEFAFNESAGKVTL 256 Query: 235 ADMDDPKAE--------------ELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTC 280 M+ + FSA+ +CP C + EP+LF+F +P+G C C Sbjct: 257 LVMEPLSGQTTGIPFQIGQRQSFRFDFSADMSCPQCQREFAQPEPQLFNFFSPSGVCTNC 316 Query: 281 DGLGVQQY 288 G G+ Sbjct: 317 GGSGLISI 324 Score = 182 bits (462), Expect = 6e-44, Method: Composition-based stats. Identities = 75/226 (33%), Positives = 116/226 (51%), Gaps = 18/226 (7%) Query: 728 PGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKYKGKTIHE 787 P F+F G C C G G+I +E C C+G R N L ++ G I + Sbjct: 301 PQLFNFFSPSGVCTNCGGSGLISIESSGGRSAE-TCPHCQGSRLNASALAVRVNGSNIDQ 359 Query: 788 V-----------LD-----MTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLS 831 + L+ +T E + + + +L L ++GL Y+ L ++ +TLS Sbjct: 360 LGQQPIQQIGAWLEQFSEGLTATETKPLAPLLREIRERLSLLNELGLGYLTLNRTRSTLS 419 Query: 832 GGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHN 891 GE QR L L TLY+LDEP++GLH AD ++L VL KLR NT++++EH+ Sbjct: 420 SGEIQRTAL-TSLLSSNLVNTLYVLDEPSSGLHPADSHRVLTVLQKLRQLNNTLLIVEHD 478 Query: 892 LDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLK 937 I+ A+++++LGP G GGE++ SG E + +S T+RFL Sbjct: 479 AAFIRAAEYVIELGPAAGRAGGEVIFSGPLEALLASNSSPTSRFLN 524 Score = 85.4 bits (210), Expect = 1e-14, Method: Composition-based stats. Identities = 39/113 (34%), Positives = 55/113 (48%), Gaps = 7/113 (6%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVES-LSAYAR 62 I + A +NL+NI + P +L VVTG+SGSGKSSL TL+ E+ S A Sbjct: 543 ITLTDASRNNLQNITVKFPLRQLSVVTGISGSGKSSLIEQTLFPLLAAELSETGTSPLAD 602 Query: 63 QFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARV 115 SL +D + I ++ T NPRS T + D +R +FA+ Sbjct: 603 GCQSLSGAEQIDEV------ILLDHSFTGQNPRSIPATYLNLFDDIRSIFAQT 649 Score = 73.0 bits (178), Expect = 5e-11, Method: Composition-based stats. Identities = 33/133 (24%), Positives = 55/133 (41%), Gaps = 11/133 (8%) Query: 596 RKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLF 655 +P + +P ++++ G R +NLK + L +P+ + GVSGSGK++L DTL+ Sbjct: 1 MTTHLPDETAFQHPSSMIQVRGVRVHNLKSIDLDIPLNQLIAVCGVSGSGKTSLAFDTLY 60 Query: 656 PIAQRQLNGATIAEPAPYR------DIQGLEHFDKVIDIDQSPIGRTPRSNPATYT---- 705 QR+ Y D + I + Q+ R S T Sbjct: 61 AEGQRRYLETLSPSARQYLNQLPKPDADQITQIPPAIALRQNTSQRHFTSRGLETTAGIE 120 Query: 706 -GVFTPVRELFAG 717 G+ +R LF+ Sbjct: 121 SGIQHYLRLLFSA 133 >UniRef50_A1SIJ3 ABC transporter related n=10 Tax=Bacteria RepID=A1SIJ3_NOCSJ Length = 836 Score = 618 bits (1595), Expect = e-175, Method: Composition-based stats. Identities = 252/773 (32%), Positives = 402/773 (52%), Gaps = 28/773 (3%) Query: 175 IRARIDGEVCDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVV 234 RA++D EV + P L L+++ + V F +L L F G + Sbjct: 77 TRAQVD-EVRHV--PAALALRQRPAVPGVRSTFGTSTELLNVLRVMFSRL-----GAHLC 128 Query: 235 ADMDD-PKAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDR 293 + ++ + CP CG F+FN+ GACP C G G + D Sbjct: 129 PNGHRLAPTIDVAADKDLVCPECGAQFSPPGAESFAFNS-GGACPVCQGTGTVRDVDDAA 187 Query: 294 VIQNPELSLAGGAIRGWDRRNFYYFQMLKSLADHYKFDVEAPWGSLSANVHKVVLYGSGK 353 ++ + S+A GA+ W + ++ + P+ L+ ++VL G + Sbjct: 188 LVPDESRSIADGAVAPW---GMFGLTVMPQVVAELGVRTGVPYADLTDAEREIVLDG-PQ 243 Query: 354 ENIEFKYMNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGTR 413 + + G + + S +A+FI+ C +C GTR Sbjct: 244 VKKHIRVPSRNGKLFDLDFTYRNARLAVREAMNNATSEKGLARVARFITAHTCHACGGTR 303 Query: 414 LRREARHVYVENTPLPAISDMSIGHAMEFFNNLK--LAGQRAKIAEKILKEIGDRLKFLV 471 L EAR V L + +++ A+ + ++ L +A ++ + + L Sbjct: 304 LSEEARGTQVAGIDLAEATALTLDEAVAWVPSVTDTLPADMHPMARMLIIQFEAMARRLT 363 Query: 472 NVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTL 531 +GL YL+L R+ TLS GE QR++LA + GV+YVLDEPSIGLH + E L+ + Sbjct: 364 ELGLGYLSLDRTGSTLSTGERQRVQLARAVRNDTTGVLYVLDEPSIGLHPANVEGLVAVM 423 Query: 532 IHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQY 591 L D GN+V+VV+HD +R AD +I++GPG+G GG V+ +G + + A P SL G + Sbjct: 424 RDLLDNGNSVVVVDHDVQVLREADWMIELGPGSGADGGTVLTQGTIAQVAADPSSLIGPF 483 Query: 592 MSGKRKIEVPKKRVP---ANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKST 648 ++G + V + R P + V++L +R + ++ + +T+P G T +TG+SGSGK+T Sbjct: 484 LTGGVDV-VRRLRTPLETSEDRGVIRLVTSRLHTVQALDVTIPQGRLTAVTGMSGSGKTT 542 Query: 649 LINDTLFPIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVF 708 L+ D+L P + + + + D G +V +D SPIG RS ATY+G+ Sbjct: 543 LVLDSLVPALRATADNTPLPDHVVSVDTAG---VSRVDVVDASPIGVNVRSTVATYSGIL 599 Query: 709 TPVRELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKG 768 +R +A ++ RG T FS+N RC C+G G + +++ FLPD+ +PC C G Sbjct: 600 DELRRAYAASDAAKDRGLTAADFSYNTGSLRCPRCEGTGQVVLDVQFLPDVDIPCPDCGG 659 Query: 769 KRY----NRETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLG 824 RY N L+ + +++ +L +T+ +A E D +P + RKLQTL+D+GL Y+ LG Sbjct: 660 ARYSPSSNDILLDTEDGTQSLPGLLALTVRQAHEVLDGLPKVRRKLQTLIDLGLGYLTLG 719 Query: 825 QSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNT 884 + LSGGEAQR+KLA EL + +G TL++LDEP+ GLH D Q L+ VL +L +G T Sbjct: 720 EGTPALSGGEAQRLKLASELGRDQSG-TLFVLDEPSVGLHPLDTQVLIGVLDRLLAKGAT 778 Query: 885 IVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLK 937 IV++EH+L++I AD ++D+GP GG+ GG I+ SGTPE +A S T R+L+ Sbjct: 779 IVLVEHDLELIANADHVIDMGPGGGTAGGRIIASGTPEHIAASTDSITGRYLR 831 Score = 167 bits (424), Expect = 2e-39, Method: Composition-based stats. Identities = 61/143 (42%), Positives = 90/143 (62%), Gaps = 2/143 (1%) Query: 2 DKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYA 61 + I+VRGAR HNLK++++ +P D L+ + G+SGSGKSSLA LYAEG RRYVE+LS Y Sbjct: 10 NGIQVRGARVHNLKDVSVDVPLDGLVAIAGVSGSGKSSLAMGVLYAEGSRRYVEALSTYT 69 Query: 62 RQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCP 121 R+ ++ + VD + + A+++ Q+ RST GT TE+ + LR++F+R+G CP Sbjct: 70 RRRMAHATRAQVDEVRHVPAALALRQRPAVPGVRSTFGTSTELLNVLRVMFSRLGAHLCP 129 Query: 122 DHDVPLAAQTVSQMVDNVLSQPE 144 + A T+ D L PE Sbjct: 130 NGHR--LAPTIDVAADKDLVCPE 150 Score = 90.8 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 42/177 (23%), Positives = 65/177 (36%), Gaps = 34/177 (19%) Query: 607 ANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGAT 666 +++ GAR +NLKDV++ +P+ I GVSGSGKS+L L+ R+ A Sbjct: 6 RTARNGIQVRGARVHNLKDVSVDVPLDGLVAIAGVSGSGKSSLAMGVLYAEGSRRYVEAL 65 Query: 667 IAEPAPYRDIQGLEHFDKVIDID------QSPIGRTPRSNPATYTGVFTPVRELFAGVPE 720 D+V + Q P RS T T + +R +F+ + Sbjct: 66 STYTRRRMAHATRAQVDEVRHVPAALALRQRPAVPGVRSTFGTSTELLNVLRVMFSRLGA 125 Query: 721 ---------------------------SRARGYTPGRFSFNVRGGRCEACQGDGVIK 750 ++ F+FN GG C CQG G ++ Sbjct: 126 HLCPNGHRLAPTIDVAADKDLVCPECGAQFSPPGAESFAFNS-GGACPVCQGTGTVR 181 Score = 80.7 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 40/142 (28%), Positives = 58/142 (40%), Gaps = 34/142 (23%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 63 I + +R H ++ +++ IP+ +L VTG+SGSGK++L D SL R Sbjct: 507 IRLVTSRLHTVQALDVTIPQGRLTAVTGMSGSGKTTLVLD------------SLVPALRA 554 Query: 64 FLSLMEKPD----VDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFA------ 113 PD VD G+S ++ N RSTV T + I D LR +A Sbjct: 555 TADNTPLPDHVVSVDT-AGVSRVDVVDASPIGVNVRSTVATYSGILDELRRAYAASDAAK 613 Query: 114 -----------RVGEPRCPDHD 124 G RCP + Sbjct: 614 DRGLTAADFSYNTGSLRCPRCE 635 >UniRef50_C0VYB5 Excinuclease subunit A n=1 Tax=Actinomyces coleocanis DSM 15436 RepID=C0VYB5_9ACTO Length = 833 Score = 615 bits (1586), Expect = e-174, Method: Composition-based stats. Identities = 250/740 (33%), Positives = 377/740 (50%), Gaps = 109/740 (14%) Query: 264 EPRLFSFNNPA--------------------------GACPTCDGLGVQQYFDPDRVIQN 297 P FSFN P G C C+GLGV D +V N Sbjct: 139 SPNAFSFNVPNVKASGAIKVEKGKDTKTEKRTYEVNGGMCADCEGLGVVNDIDLTKVF-N 197 Query: 298 PELSLAGGAIRGWDRRNFYYFQMLKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKENIE 357 ELSL GAI ++ + F + P + +A + LYG + Sbjct: 198 VELSLNDGAIT--VPGYTADGWAVRLYSASGFFPADQPIKTFTAEQLQTFLYGEPVKV-- 253 Query: 358 FKYMNDRGDTSIRRHPFEGVLHNMERRYKETE----SSAVREELAKFISNRPCASCEGTR 413 +EG++ +++ + +R+ + ++ PC +CEGTR Sbjct: 254 --------KIESINMTYEGLIPKLQKSMFSKDIEGLQPHIRKFVETAVTFAPCPACEGTR 305 Query: 414 LRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEK---------ILKEIG 464 L AR V V + + I + + L LAG+ A A + +L + Sbjct: 306 LNPAARAVTVAGLNIAQAHVLEITDLLAWVQQL-LAGEIALAAAEAPLISEGGLLLTNLA 364 Query: 465 DRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDN 524 ++L V +GL YL+L+RSA +LSGGEAQR+++ + + L + YV DEP+ GLH D Sbjct: 365 EQLSSFVEIGLGYLSLARSASSLSGGEAQRVKMIRHLRSALTDMTYVFDEPTAGLHPHDI 424 Query: 525 ERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVP 584 ER+ L+ LRD GNTV+V+EH + I ADH+ID+GPGAG HGGE++ G ++AV Sbjct: 425 ERMKRVLLQLRDAGNTVLVIEHRPEVIEIADHIIDMGPGAGKHGGEIMFAGTFSELLAVS 484 Query: 585 ESLT--GQYMSGK----------------RKIEVPKKRVPANPEKVLKLTGARGNNLKDV 626 ++ T G + + + K + ++L G NNL+ + Sbjct: 485 DAKTSLGTSLPNGNPRKADSAQTSVTSQVLSLPLQVKTSARTFSEKIELRGVTANNLRGI 544 Query: 627 TLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAEPAPYRDIQGLEHFDKVI 686 + +P+G+ T +TGV+GSGKSTLI + A ++I Sbjct: 545 DVDVPLGVLTAVTGVAGSGKSTLIGALVSSGAAP----------------------SEII 582 Query: 687 DIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESRARGYTPGRFSFNVRGGRCEACQGD 746 +DQ I + RSNPATYTGVF P+R+ FA +A G P FS N G CE C+G Sbjct: 583 MVDQGAIKGSRRSNPATYTGVFDPIRKAFA-----KASGQKPALFSANSEGA-CETCKGA 636 Query: 747 GVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFF---DAV 803 GVI ++ F+ + C+ C G+R++ L+ +GK+I +VL+M +EA EFF Sbjct: 637 GVIYTDLGFMQTVENHCESCDGRRFDESVLQYHLEGKSIADVLEMPAQEALEFFTKEAKN 696 Query: 804 PALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGL 863 PA+++ LQ L+DVGL Y+ LGQS TTLSGGE QR+KLA +++ +G +Y+LDEP+TGL Sbjct: 697 PAVSKVLQRLVDVGLEYLSLGQSLTTLSGGERQRLKLASQMADKG---GIYVLDEPSTGL 753 Query: 864 HFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPET 923 H AD ++LL +L +L D G T++V+EHNL V+ ADW++DLGP G GG+++ +GT Sbjct: 754 HLADTRKLLALLDQLVDSGKTVIVVEHNLHVVAHADWVIDLGPGAGHEGGQVVYAGTVSQ 813 Query: 924 VAECEA----SHTARFLKPM 939 + + S TA++++ Sbjct: 814 MHADKNLADQSKTAQYIQKY 833 Score = 172 bits (435), Expect = 9e-41, Method: Composition-based stats. Identities = 55/116 (47%), Positives = 78/116 (67%) Query: 2 DKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYA 61 D I V GA+ +NLKN+ + IP+ KL V TG+SGSGKSSL FDT+ E QR E+ A+ Sbjct: 9 DFIHVIGAQENNLKNLEVQIPKRKLTVFTGVSGSGKSSLVFDTIATESQRLINETYPAFI 68 Query: 62 RQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGE 117 + F+ + +P VD + GL+PAI + Q+ N RSTVGT+T++ LRL++A+ G Sbjct: 69 QGFMGNLNRPHVDDLRGLTPAIVVSQEKLGANARSTVGTVTDVSTLLRLIWAKFGV 124 Score = 95.8 bits (237), Expect = 7e-18, Method: Composition-based stats. Identities = 51/178 (28%), Positives = 75/178 (42%), Gaps = 40/178 (22%) Query: 612 VLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAEPA 671 + + GA+ NNLK++ + +P T TGVSGSGKS+L+ DT+ +QR +N A Sbjct: 10 FIHVIGAQENNLKNLEVQIPKRKLTVFTGVSGSGKSSLVFDTIATESQRLINETYPAFIQ 69 Query: 672 PYRDIQGLEHFDKV------IDIDQSPIGRTPRSNPATYTGVFTPVRELFAG-----VPE 720 + H D + I + Q +G RS T T V T +R ++A Sbjct: 70 GFMGNLNRPHVDDLRGLTPAIVVSQEKLGANARSTVGTVTDVSTLLRLIWAKFGVVAENN 129 Query: 721 SRARGY---TPGRFSFNVR--------------------------GGRCEACQGDGVI 749 ++ R +P FSFNV GG C C+G GV+ Sbjct: 130 TKVRALKMSSPNAFSFNVPNVKASGAIKVEKGKDTKTEKRTYEVNGGMCADCEGLGVV 187 Score = 75.7 bits (185), Expect = 9e-12, Method: Composition-based stats. Identities = 34/116 (29%), Positives = 54/116 (46%), Gaps = 32/116 (27%) Query: 2 DKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYA 61 +KIE+RG +NL+ I++ +P L VTG++GSGKS+L + A V S Sbjct: 529 EKIELRGVTANNLRGIDVDVPLGVLTAVTGVAGSGKSTL----IGA-----LVSS----- 574 Query: 62 RQFLSLMEKPDVDHIEGLSPA--ISIEQKSTSHNPRSTVGTITEIHDYLRLLFARV 115 G +P+ I ++Q + + RS T T + D +R FA+ Sbjct: 575 ----------------GAAPSEIIMVDQGAIKGSRRSNPATYTGVFDPIRKAFAKA 614 >UniRef50_Q49WT2 Excinuclease ATPase subunit n=16 Tax=Staphylococcaceae RepID=Q49WT2_STAS1 Length = 753 Score = 614 bits (1584), Expect = e-174, Method: Composition-based stats. Identities = 234/720 (32%), Positives = 359/720 (49%), Gaps = 68/720 (9%) Query: 228 SGGTAVVADMDDPKAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQ 287 + V + D A L + P GYS FSFN+P G C TC+GLG + Sbjct: 92 GNSRSTVGTVSDIYASVRLLWSRIGEPFVGYS------DAFSFNSPNGMCETCEGLGYIE 145 Query: 288 YFDPDRVIQNPELSLAGGAIRGWDRRNFYYFQMLKSLADHYK----FDVEAPWGSLSANV 343 + + ++ + SL GAI NF F K Y+ FD + + + Sbjct: 146 DINLNELL-DWNKSLNEGAI------NFPSFGPDKERGKAYRDSGLFDNDKKLKAYTKEE 198 Query: 344 HKVVLYGSGKENIEFKYMNDRGDTSIRRHPFEGVLHNMERRY---KETESSAVREELAKF 400 + LY +E I+ K + S + + G++ R + KE + L Sbjct: 199 LDLFLY---QEPIKLKKPPEEWRKSAK---YVGLIPRFRRIFLGDKEFNKKRYAKHLKNV 252 Query: 401 ISNRPCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKIL 460 + N+ C +C G RL + + + + M++ + F N L + A+ I+ Sbjct: 253 VENKVCPTCNGQRLNSKILSCKIMGKNISDFTQMTVKENLAFLNKLNNS-----TAQFII 307 Query: 461 KEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLH 520 + + +L+ L +GL+YLTL R +LSGGEAQR++L + + L ++Y++DEPS+GLH Sbjct: 308 EPLRKQLEALDYIGLSYLTLDRVTTSLSGGEAQRLKLIRHLNSSLSDLVYIIDEPSVGLH 367 Query: 521 QRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAI 580 D ++ L L+ GNTV++VEHD D I+ AD++ID+GP +G GGE+ +G + + Sbjct: 368 PEDIAKINEILKSLKHKGNTVLIVEHDPDVIKEADYIIDMGPSSGAQGGEITFKGTYKKL 427 Query: 581 MAVPESLTGQYMSGKRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITG 640 ++ S TG+ + K + K + L NNL +VT+ +P + T +TG Sbjct: 428 LSSDTS-TGEALRIKHHL----KNEIREAKSFYHLGPVTQNNLNNVTVDIPKHVLTVLTG 482 Query: 641 VSGSGKSTLINDTLFPIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSN 700 V+GSGKS+L+ G D + +DQ I + RSN Sbjct: 483 VAGSGKSSLVKA-------------------------GFAKNDNAVFMDQKAIQGSDRSN 517 Query: 701 PATYTGVFTPVRELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIY 760 TY GVF VR F S+ G FS+N +G C C G G I+ E+ F+ + Sbjct: 518 LLTYLGVFDRVRNFF-----SKETGLNKSMFSYNSKGA-CPNCGGKGYIETELAFMGEFS 571 Query: 761 VPCDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTY 820 C+ C GKRY E L G +I + L++T++E FFD + KLQ + GL Y Sbjct: 572 QTCEVCHGKRYKPEVLNATIDGYSIADFLELTVDEGIRFFDKENEIQSKLQAISKTGLNY 631 Query: 821 IRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRD 880 + LGQ +TLSGGE QRVKL + L+ T +++I DEPTTGLH ADI L++ + L + Sbjct: 632 VTLGQPLSTLSGGEIQRVKLGQYLNDDVTD-SIFIFDEPTTGLHEADIPILINCFNDLIE 690 Query: 881 QGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLKPML 940 Q NT+++IEHNL ++ ADWI+D+GP G GG+I SG P + + T++ LK + Sbjct: 691 QNNTVILIEHNLSIMCDADWIIDVGPGPGLDGGKIQFSGYPINFVKENKTLTSKHLKLYI 750 Score = 169 bits (429), Expect = 4e-40, Method: Composition-based stats. Identities = 56/119 (47%), Positives = 81/119 (68%) Query: 1 MDKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAY 60 M+ I + GA +NLKNIN+ IP+ + V TG SGSGKSSL F T+ AE ++ ES S+Y Sbjct: 1 MNDITIIGASQNNLKNINITIPKHLVTVFTGRSGSGKSSLVFRTIAAESEQLLNESYSSY 60 Query: 61 ARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPR 119 + L+ KP V+ I+ L A++I QK + N RSTVGT+++I+ +RLL++R+GEP Sbjct: 61 IQFHLNKQPKPKVNAIKNLPVAMTISQKRFNGNSRSTVGTVSDIYASVRLLWSRIGEPF 119 Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats. Identities = 45/144 (31%), Positives = 73/144 (50%), Gaps = 8/144 (5%) Query: 613 LKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIA---- 668 + + GA NNLK++ +T+P L T TG SGSGKS+L+ T+ +++ LN + + Sbjct: 4 ITIIGASQNNLKNINITIPKHLVTVFTGRSGSGKSSLVFRTIAAESEQLLNESYSSYIQF 63 Query: 669 --EPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESRARGY 726 P + +++ + I Q RS T + ++ VR L++ + E GY Sbjct: 64 HLNKQPKPKVNAIKNLPVAMTISQKRFNGNSRSTVGTVSDIYASVRLLWSRIGEPFV-GY 122 Query: 727 TPGRFSFNVRGGRCEACQGDGVIK 750 + FSFN G CE C+G G I+ Sbjct: 123 SDA-FSFNSPNGMCETCEGLGYIE 145 Score = 69.2 bits (168), Expect = 7e-10, Method: Composition-based stats. Identities = 29/129 (22%), Positives = 52/129 (40%), Gaps = 42/129 (32%) Query: 9 ARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQFLSLM 68 +NL N+ + IP+ L V+TG++GSGKSSL + +A+ Sbjct: 460 VTQNNLNNVTVDIPKHVLTVLTGVAGSGKSSLV---------------KAGFAKN----- 499 Query: 69 EKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARV-----------GE 117 D+ A+ ++QK+ + RS + T + D +R F++ + Sbjct: 500 -----DN------AVFMDQKAIQGSDRSNLLTYLGVFDRVRNFFSKETGLNKSMFSYNSK 548 Query: 118 PRCPDHDVP 126 CP+ Sbjct: 549 GACPNCGGK 557 >UniRef50_Q7UK42 Excinuclease ABC subunit A n=1 Tax=Rhodopirellula baltica RepID=Q7UK42_RHOBA Length = 839 Score = 614 bits (1583), Expect = e-174, Method: Composition-based stats. Identities = 275/550 (50%), Positives = 382/550 (69%), Gaps = 6/550 (1%) Query: 390 SSAVREELAKFISNRPCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNL--K 447 AVR + + ++ C++CEG RL+ E+ V + + + A+ M + A + N+ Sbjct: 292 KVAVRGDKSHMVT---CSTCEGGRLKAESLAVTIHDVSIDAMCRMPLPDAQSWMENVAKP 348 Query: 448 LAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVG 507 L + K+A I E+ R+ FL VG++YLTL RSAETLSGGE QR+RLA+ IG+GLVG Sbjct: 349 LDALQQKVAAPIQSEVVRRIDFLRRVGVDYLTLDRSAETLSGGEMQRVRLATSIGSGLVG 408 Query: 508 VMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVH 567 V YVLDEPSIGLH D+ RLL + L+ GNT+++VEHDED I+AADHVIDIGPGAG H Sbjct: 409 VCYVLDEPSIGLHPADHHRLLAAIKELQTAGNTIVIVEHDEDTIQAADHVIDIGPGAGRH 468 Query: 568 GGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEVPKKRVPANPEKVLKLTGARGNNLKDVT 627 GG +V++G + S TG Y+SG+ KI + + R L LTGA NNL++VT Sbjct: 469 GGRLVSQGTAAEVADDESSPTGAYLSGRSKIGLDRPRRTPRKSHQLTLTGATLNNLQNVT 528 Query: 628 LTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAEPAPYRDIQGLEHFDKVID 687 +P+G ++GVSGSGKS+LI DTL+P +L +P P++ + G +H DK++ Sbjct: 529 AKIPLGCLVGVSGVSGSGKSSLIVDTLYPALAAKLE-LVADQPGPHKRLTGAQHIDKLVP 587 Query: 688 IDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDG 747 IDQ+PIGRT RS PATY GV P+R+++A E++ G+ RFSFN GRC+ C+G+G Sbjct: 588 IDQTPIGRTTRSCPATYAGVMDPIRQVYASTREAKTLGFAANRFSFNSPAGRCDVCKGNG 647 Query: 748 VIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALA 807 ++EM+FL D+ + C +C GKR+NR+TL++++KG TI +VL MTI+ A+EFF+ VP + Sbjct: 648 FERIEMNFLSDLLIECSRCGGKRFNRQTLQVRFKGATIADVLGMTIDAAQEFFENVPKVH 707 Query: 808 RKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFAD 867 L +L+DVGL Y+ LGQS+TTLSGGEAQR+KLA EL++ TG+T Y+LDEPTTGLHFAD Sbjct: 708 HLLASLVDVGLGYVTLGQSSTTLSGGEAQRIKLATELARPATGKTFYVLDEPTTGLHFAD 767 Query: 868 IQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAEC 927 +Q+LL VL +L + GNT++VIEH D++ DW++DLGP GGS GG ++ G PET+A C Sbjct: 768 VQRLLVVLDRLVEAGNTVLVIEHQSDLLAACDWLLDLGPGGGSQGGHLIAEGPPETIAAC 827 Query: 928 EASHTARFLK 937 S T +FL+ Sbjct: 828 PKSATGKFLR 837 Score = 362 bits (930), Expect = 3e-98, Method: Composition-based stats. Identities = 149/286 (52%), Positives = 201/286 (70%), Gaps = 1/286 (0%) Query: 2 DKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYA 61 + I +RGAR HNL+N+++ IPRD + V++G+SGSGKSSLAFDTL+AEGQR+Y++SLS YA Sbjct: 8 NLIRIRGARVHNLRNLDVDIPRDAITVISGVSGSGKSSLAFDTLFAEGQRQYIDSLSTYA 67 Query: 62 RQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCP 121 RQ+L + +PDVD I+GL+P +SI+QKS SH+ RSTV TITEI+DYLRLL+ARVG P C Sbjct: 68 RQYLDAIPRPDVDWIDGLAPTLSIDQKSGSHSARSTVATITEIYDYLRLLYARVGVPHCV 127 Query: 122 DHDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARIDG 181 ++ QT ++V + + P+ +L L++P+++ RKG H LE +A G +RAR+DG Sbjct: 128 ACGSTISTQTPDRIVATLATLPDRTKLTLMSPMVRGRKGAHADVLEQIAGHGLVRARVDG 187 Query: 182 EVCDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAV-VADMDDP 240 E+ L D P L ++K HTIE +VDR ++D + RL ES AL L+GG + D D Sbjct: 188 EMYLLEDVPPLAVRKNHTIEAIVDRLIIKDGVDARLDESTRLALRLAGGMCSALIDRGDG 247 Query: 241 KAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQ 286 + E LFS + C CG S ELEPR FSFN+P GACP C GLG Sbjct: 248 EPETKLFSTSMTCLECGESFEELEPRTFSFNSPYGACPACQGLGKV 293 Score = 194 bits (493), Expect = 1e-47, Method: Composition-based stats. Identities = 83/227 (36%), Positives = 120/227 (52%), Gaps = 19/227 (8%) Query: 726 YTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKYKGKTI 785 P FSFN G C ACQG G KV + V C C+G R E+L + +I Sbjct: 270 LEPRTFSFNSPYGACPACQGLG--KVAVRGDKSHMVTCSTCEGGRLKAESLAVTIHDVSI 327 Query: 786 HEVLDMTIEEAREFFDAVPA----------------LARKLQTLMDVGLTYIRLGQSATT 829 + M + +A+ + + V + R++ L VG+ Y+ L +SA T Sbjct: 328 DAMCRMPLPDAQSWMENVAKPLDALQQKVAAPIQSEVVRRIDFLRRVGVDYLTLDRSAET 387 Query: 830 LSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIE 889 LSGGE QRV+LA + G Y+LDEP+ GLH AD +LL + +L+ GNTIV++E Sbjct: 388 LSGGEMQRVRLATSIGSGLVG-VCYVLDEPSIGLHPADHHRLLAAIKELQTAGNTIVIVE 446 Query: 890 HNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFL 936 H+ D I+ AD ++D+GP G GG ++ GT VA+ E+S T +L Sbjct: 447 HDEDTIQAADHVIDIGPGAGRHGGRLVSQGTAAEVADDESSPTGAYL 493 Score = 171 bits (433), Expect = 2e-40, Method: Composition-based stats. Identities = 79/191 (41%), Positives = 112/191 (58%), Gaps = 15/191 (7%) Query: 406 CASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGD 465 C+ C G R R+ V + + + M+I A EFF N+ ++ Sbjct: 663 CSRCGGKRFNRQTLQVRFKGATIADVLGMTIDAAQEFFENVP--------------KVHH 708 Query: 466 RLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVG-VMYVLDEPSIGLHQRDN 524 L LV+VGL Y+TL +S+ TLSGGEAQRI+LA+++ G YVLDEP+ GLH D Sbjct: 709 LLASLVDVGLGYVTLGQSSTTLSGGEAQRIKLATELARPATGKTFYVLDEPTTGLHFADV 768 Query: 525 ERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVP 584 +RLL L L + GNTV+V+EH D + A D ++D+GPG G GG ++AEGP E I A P Sbjct: 769 QRLLVVLDRLVEAGNTVLVIEHQSDLLAACDWLLDLGPGGGSQGGHLIAEGPPETIAACP 828 Query: 585 ESLTGQYMSGK 595 +S TG+++ + Sbjct: 829 KSATGKFLRLR 839 Score = 68.8 bits (167), Expect = 9e-10, Method: Composition-based stats. Identities = 39/118 (33%), Positives = 61/118 (51%), Gaps = 6/118 (5%) Query: 607 ANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGAT 666 + + ++++ GAR +NL+++ + +P T I+GVSGSGKS+L DTLF QRQ + Sbjct: 4 PSTDNLIRIRGARVHNLRNLDVDIPRDAITVISGVSGSGKSSLAFDTLFAEGQRQYIDSL 63 Query: 667 IAEPAPYRDIQGLEHFDKV------IDIDQSPIGRTPRSNPATYTGVFTPVRELFAGV 718 Y D D + + IDQ + RS AT T ++ +R L+A V Sbjct: 64 STYARQYLDAIPRPDVDWIDGLAPTLSIDQKSGSHSARSTVATITEIYDYLRLLYARV 121 Score = 49.2 bits (116), Expect = 8e-04, Method: Composition-based stats. Identities = 38/118 (32%), Positives = 54/118 (45%), Gaps = 7/118 (5%) Query: 2 DKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYA 61 ++ + GA +NL+N+ IP L+ V+G+SGSGKSSL DTLY L A Sbjct: 512 HQLTLTGATLNNLQNVTAKIPLGCLVGVSGVSGSGKSSLIVDTLYPA----LAAKLELVA 567 Query: 62 RQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPR 119 Q HI+ L P I+Q RS T + D +R ++A E + Sbjct: 568 DQPGPHKRLTGAQHIDKLVP---IDQTPIGRTTRSCPATYAGVMDPIRQVYASTREAK 622 >UniRef50_A6BZF4 Excinuclease ABC subunit A n=1 Tax=Planctomyces maris DSM 8797 RepID=A6BZF4_9PLAN Length = 847 Score = 613 bits (1582), Expect = e-174, Method: Composition-based stats. Identities = 236/545 (43%), Positives = 352/545 (64%), Gaps = 7/545 (1%) Query: 402 SNRPCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLK------LAGQRAKI 455 S + C C+G R+ + R + + + + + + + + K ++ Q I Sbjct: 298 SGQICPDCQGARISQYGRSILLNQQSIDQVVQFTAPEIINWLDQWKAGEAQGMSLQDQVI 357 Query: 456 AEKILKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEP 515 A++I I RL++L +GL Y+ LSR ++TLSGGE QR RL + +GAG G Y+LDEP Sbjct: 358 ADQIEPSIRKRLEYLTEIGLGYIQLSRPSKTLSGGELQRARLTACLGAGTTGACYILDEP 417 Query: 516 SIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEG 575 + GLH + ++LL L L+ GNT+IVVEHD D I+AAD+++DIGP AG GG++V G Sbjct: 418 TAGLHANETQKLLRILQRLKQAGNTIIVVEHDHDVIKAADYLVDIGPQAGAEGGKLVFSG 477 Query: 576 PLEAIMAVPESLTGQYMSGKRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLF 635 +A + PES+T Q ++ + + R + E+ ++LTGAR NNLK++++ +P+ Sbjct: 478 DYDAFIQHPESMTAQGLTARFQNSPQAHRSKTSHEQFVQLTGARTNNLKEISVKVPLQQL 537 Query: 636 TCITGVSGSGKSTLINDTLFPIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGR 695 C+TGVSGSGKS+LI +TL P + +LN Y +QG+E+ ++ IDQS +G+ Sbjct: 538 VCVTGVSGSGKSSLIMETLVPAIKSELN-RRPNPALQYDSLQGVEYLQQIKIIDQSALGK 596 Query: 696 TPRSNPATYTGVFTPVRELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHF 755 RSNPATY G++ VR+LF+ +R RGYT RFSFN GRC AC+G GV ++++ F Sbjct: 597 NGRSNPATYCGIWDEVRKLFSKTKTARLRGYTARRFSFNSAEGRCGACRGTGVKRIDLKF 656 Query: 756 LPDIYVPCDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMD 815 LP +++PC++C KR+NR TL + Y+GKT+ +VL+M+I EA EFF+++P + R LQ L+D Sbjct: 657 LPPVFLPCEKCHSKRFNRGTLSVTYRGKTVSDVLEMSIAEAGEFFESIPRIKRILQVLLD 716 Query: 816 VGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVL 875 +GL Y+ LGQ A LSGGEAQR++LA EL G TL++LDEPT GLH DI+ LL L Sbjct: 717 LGLGYLALGQPANLLSGGEAQRLRLASELFAPLNGMTLFVLDEPTRGLHSHDIECLLQTL 776 Query: 876 HKLRDQGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARF 935 ++L D GN+++VIEH+ V+ A+W++DLGPE G+ GG ++ G P +A T R Sbjct: 777 NRLIDAGNSVLVIEHHPQVMCAAEWLIDLGPEAGNAGGYLIDEGPPALIAANRRGATGRM 836 Query: 936 LKPML 940 L ++ Sbjct: 837 LYELI 841 Score = 376 bits (965), Expect = e-102, Method: Composition-based stats. Identities = 126/296 (42%), Positives = 187/296 (63%), Gaps = 2/296 (0%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 63 I +RGAR HNLKNI++ +P +++ +VTG+SGSGKSSL FDTL+ EGQRR++E+LS+ RQ Sbjct: 9 IRIRGARCHNLKNIDVDLPHNQISIVTGVSGSGKSSLVFDTLHQEGQRRFLENLSSGTRQ 68 Query: 64 FLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCPDH 123 S + VD I GL P I +Q + RST+ T+TE++D RLL+A++G C + Sbjct: 69 LFSQAQPVAVDQILGLPPTICFDQTQRVQSKRSTLATLTELYDLFRLLYAKLGIVHCVNC 128 Query: 124 DVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARIDGEV 183 L QT Q+VD VL+ + K++M+LAP++ RKG H+ L +A +G++RARIDG V Sbjct: 129 GRALHQQTPEQIVDLVLALEDRKKVMILAPVVSARKGNHSALLNQVAREGFVRARIDGAV 188 Query: 184 CDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVADMDDPKAE 243 D++ P +L H IE+V+DR V++ + RL ES + AL+ GGT +++ + Sbjct: 189 IDITQPHELPEDVPHDIEIVIDRIIVKEGIQSRLKESVDLALKQGGGTCLISHQIESGWS 248 Query: 244 ELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQ--QYFDPDRVIQN 297 + S AC C S + EP FSFN+P GACPTC+GLG+ + ++ + Sbjct: 249 DRYVSTRLACGECNLSFPDPEPVTFSFNSPHGACPTCEGLGIIEPSESESGQICPD 304 Score = 190 bits (484), Expect = 2e-46, Method: Composition-based stats. Identities = 81/226 (35%), Positives = 123/226 (54%), Gaps = 24/226 (10%) Query: 731 FSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKYKGKTIHEVLD 790 FSFN G C C+G G+I+ + C C+G R ++ I ++I +V+ Sbjct: 273 FSFNSPHGACPTCEGLGIIEPS---ESESGQICPDCQGARISQYGRSILLNQQSIDQVVQ 329 Query: 791 MTIEEAREFFDA--------------------VPALARKLQTLMDVGLTYIRLGQSATTL 830 T E + D P++ ++L+ L ++GL YI+L + + TL Sbjct: 330 FTAPEIINWLDQWKAGEAQGMSLQDQVIADQIEPSIRKRLEYLTEIGLGYIQLSRPSKTL 389 Query: 831 SGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEH 890 SGGE QR +L L TG YILDEPT GLH + Q+LL +L +L+ GNTI+V+EH Sbjct: 390 SGGELQRARLTACLGAGTTG-ACYILDEPTAGLHANETQKLLRILQRLKQAGNTIIVVEH 448 Query: 891 NLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFL 936 + DVIK AD++VD+GP+ G+ GG+++ SG + + S TA+ L Sbjct: 449 DHDVIKAADYLVDIGPQAGAEGGKLVFSGDYDAFIQHPESMTAQGL 494 Score = 95.0 bits (235), Expect = 1e-17, Method: Composition-based stats. Identities = 62/281 (22%), Positives = 110/281 (39%), Gaps = 42/281 (14%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 63 +++ GART+NLK I++ +P +L+ VTG+SGSGKSSL +E+L + Sbjct: 515 VQLTGARTNNLKEISVKVPLQQLVCVTGVSGSGKSSLI------------METLVPAIKS 562 Query: 64 FLSLMEKP--DVDHIEG---LSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEP 118 L+ P D ++G L I+Q + N RS T I D +R LF++ Sbjct: 563 ELNRRPNPALQYDSLQGVEYLQQIKIIDQSALGKNGRSNPATYCGIWDEVRKLFSKTKTA 622 Query: 119 RCPDHDVPLAAQTVSQMVDNVLSQPEGKRLML--LAPIIKERKGEHTKTLENLASQGYIR 176 R + + ++ KR+ L L P+ + H+K G + Sbjct: 623 RLRGYTARRFSFNSAEGRCGACRGTGVKRIDLKFLPPVFLPCEKCHSKRFNR----GTLS 678 Query: 177 ARIDGEVCDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVAD 236 G+ SD ++ + + + R+ + L+L G + Sbjct: 679 VTYRGKTV--SDVLEMSIAEAGEFF----------ESIPRIKRILQVLLDLGLGYLALGQ 726 Query: 237 ----MDDPKAEELLFSANFACPICGYS---MRELEPRLFSF 270 + +A+ L ++ P+ G + + E L S Sbjct: 727 PANLLSGGEAQRLRLASELFAPLNGMTLFVLDEPTRGLHSH 767 Score = 85.8 bits (211), Expect = 7e-15, Method: Composition-based stats. Identities = 34/117 (29%), Positives = 60/117 (51%), Gaps = 6/117 (5%) Query: 608 NPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATI 667 +++++ GAR +NLK++ + LP + +TGVSGSGKS+L+ DTL QR+ Sbjct: 4 QNTQMIRIRGARCHNLKNIDVDLPHNQISIVTGVSGSGKSSLVFDTLHQEGQRRFLENLS 63 Query: 668 AEPAPYRDIQGLEHFDKVIDI------DQSPIGRTPRSNPATYTGVFTPVRELFAGV 718 + D+++ + DQ+ ++ RS AT T ++ R L+A + Sbjct: 64 SGTRQLFSQAQPVAVDQILGLPPTICFDQTQRVQSKRSTLATLTELYDLFRLLYAKL 120 >UniRef50_B1KWH8 Excinuclease ABC, A subunit n=7 Tax=Clostridium RepID=B1KWH8_CLOBM Length = 790 Score = 609 bits (1571), Expect = e-172, Method: Composition-based stats. Identities = 241/695 (34%), Positives = 384/695 (55%), Gaps = 50/695 (7%) Query: 261 RELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPELSLAG-----GAIRGWDRRNF 315 +L+ FS+ +P G C C G G + D+VI N E+++ GA G Sbjct: 127 EKLDSSYFSYTSPNGMCMKCGGRGKYFNVNIDKVIPNNEITMQQVFKNIGATSG------ 180 Query: 316 YYFQMLKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKENIEFKYMNDRGDTSIRRHPFE 375 Y +L+ Y + P+ L ++ ++YG +++ + E Sbjct: 181 -YMNLLQRKYHEYFY---TPFNQLPYDIKDELIYGIP-----------TNNSNNLSYCVE 225 Query: 376 GVLHNMERRYKETESSAVREELAKFISNRPCASCEGTRLRREARHVYVENTPLPAISDMS 435 VLHN RY + E+ L C SC G R+ EAR V++ + + + +M+ Sbjct: 226 RVLHN---RYLQGEN------LKGIYEMETCESCHGFRVGEEARSVFLNHRHIGEVGNMT 276 Query: 436 IGHAMEFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRI 495 + ++ L K K+ I ++ L+ V L +LTL R +LSGGE QRI Sbjct: 277 LSQVNDYLQELLPQNTLTKFGVKMTNTILKKINALIRVRLGHLTLYREMPSLSGGELQRI 336 Query: 496 RLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAAD 555 L S + +G+ ++Y+ DEP+ GLH+ + + +L +++ L+ GNTVI+VEHD+ I+ A+ Sbjct: 337 FLNSHLDSGMDSLIYIFDEPTSGLHEFEKQEILQSILKLKKSGNTVIIVEHDKSTIKLAE 396 Query: 556 HVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEV-PKKRVPANPEKVLK 614 H+ID+GP AG++GG++V +G E ++ S+TG+Y+SG+ V +K + + Sbjct: 397 HIIDVGPKAGIYGGDIVYQGSFEGLLNAKHSITGKYLSGRTPFPVRQRKNLSKTNTNHIT 456 Query: 615 LTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQL--NGATIAEPAP 672 + A+ NNLKD+T+++P+ I GVSGSGKS+LI+ TL P+ + N I Sbjct: 457 IHNAKTNNLKDLTVSIPLNQLVGIAGVSGSGKSSLISKTLLPLLKNSFYRNTQRIQFDED 516 Query: 673 YRD-----------IQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPES 721 Y + I G+E+ ++I Q+PIGR S P +Y ++ +R LF+ P++ Sbjct: 517 YDENISLFRPIVNQIDGMENIQGYVEISQAPIGRKMNSTPISYLELWDKIRTLFSQQPKA 576 Query: 722 RARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKYK 781 + G FSFN +G C+ C+G G+ + + C +C GKR+N +TL IK+K Sbjct: 577 MQNNLSAGHFSFNSKGA-CQICKGSGLETISIGNDIHFDKSCHECNGKRFNHDTLSIKFK 635 Query: 782 GKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLA 841 GK I++VL+M+I EA FF+ + L+ L +G+ YI+LGQ TLSGGEAQR+KLA Sbjct: 636 GKDIYDVLEMSIIEAITFFEDTKLSFKPLKVLEQIGMGYIKLGQPIPTLSGGEAQRIKLA 695 Query: 842 RELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADWI 901 +E+ K+ G LYILDEP+TGL D +L+ +L +L GN+++VIEH+LD++ + DWI Sbjct: 696 KEIGKQKKGNILYILDEPSTGLSQYDTAKLITLLDELIIDGNSVIVIEHDLDILSSCDWI 755 Query: 902 VDLGPEGGSGGGEILVSGTPETVAECEASHTARFL 936 ++LG GG GG +L GTP+ + E + S T R+L Sbjct: 756 IELGKGGGIEGGNLLAEGTPQQLKENKDSLTGRYL 790 Score = 152 bits (383), Expect = 9e-35, Method: Composition-based stats. Identities = 56/118 (47%), Positives = 78/118 (66%), Gaps = 6/118 (5%) Query: 1 MDKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAY 60 M KI+++ A HNLKNI++ IP+DKLIVVTG+SGSGKSSL FD ++ EG+++Y++SL Sbjct: 1 MKKIKIKNAHMHNLKNIDITIPKDKLIVVTGVSGSGKSSLIFDLIFEEGRKQYLQSLGMS 60 Query: 61 ARQFLSLMEKPDVDHIEGLSPAISIEQKSTSH-NPRSTVGTITEIHDYLRLLFARVGE 117 + D I GLSP I+++Q N RSTVG+ T I + L LLF+ G+ Sbjct: 61 L-----EFDDNKFDSITGLSPTIAVKQSLVRQTNSRSTVGSKTGILNMLALLFSNDGK 113 Score = 91.1 bits (225), Expect = 2e-16, Method: Composition-based stats. Identities = 38/125 (30%), Positives = 63/125 (50%), Gaps = 19/125 (15%) Query: 2 DKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTL--------YAEGQR-- 51 + I + A+T+NLK++ + IP ++L+ + G+SGSGKSSL TL Y QR Sbjct: 453 NHITIHNAKTNNLKDLTVSIPLNQLVGIAGVSGSGKSSLISKTLLPLLKNSFYRNTQRIQ 512 Query: 52 ---RYVESLSAYARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYL 108 Y E++S + R ++ +D +E + + I Q ST + E+ D + Sbjct: 513 FDEDYDENISLF-RPIVNQ-----IDGMENIQGYVEISQAPIGRKMNSTPISYLELWDKI 566 Query: 109 RLLFA 113 R LF+ Sbjct: 567 RTLFS 571 Score = 88.8 bits (219), Expect = 9e-16, Method: Composition-based stats. Identities = 43/152 (28%), Positives = 66/152 (43%), Gaps = 18/152 (11%) Query: 611 KVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQ----LNGAT 666 K +K+ A +NLK++ +T+P +TGVSGSGKS+LI D +F ++Q L + Sbjct: 2 KKIKIKNAHMHNLKNIDITIPKDKLIVVTGVSGSGKSSLIFDLIFEEGRKQYLQSLGMSL 61 Query: 667 IAEPAPYRDIQGLEHFDKVIDIDQSPIGRT-PRSNPATYTGVFTPVRELFA--------- 716 + + I GL I + QS + +T RS + TG+ + LF+ Sbjct: 62 EFDDNKFDSITGLSP---TIAVKQSLVRQTNSRSTVGSKTGILNMLALLFSNDGKMVNEE 118 Query: 717 -GVPESRARGYTPGRFSFNVRGGRCEACQGDG 747 FS+ G C C G G Sbjct: 119 TNFNIGDDEKLDSSYFSYTSPNGMCMKCGGRG 150 >UniRef50_D2Q2S9 ABC transporter related protein n=6 Tax=Bacteria RepID=D2Q2S9_9ACTO Length = 753 Score = 609 bits (1571), Expect = e-172, Method: Composition-based stats. Identities = 248/714 (34%), Positives = 354/714 (49%), Gaps = 70/714 (9%) Query: 228 SGGTAVVADMDDPKAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQ 287 + V + D L + + P G E FSFN+PAG CP C GLG Sbjct: 93 GNARSTVGTITDTWTYLRLLFSRTSTPYVG------ESGHFSFNDPAGMCPACAGLGEVV 146 Query: 288 YFDPDRVIQNPELSLAGGAIR--GWDRRNFYYFQMLKSLADHYKFDVEAPWGSLSANVHK 345 DR + + SLA GAI G+ ++Y Q AD FD++ P S Sbjct: 147 VSAVDRFL-DLNKSLAAGAILLPGFGHGGYWYNQ----YADIGSFDLDTPLREWSPTERD 201 Query: 346 VVLYGSGKENIEFKYMNDRGDTSIRRHPFEGVLHNMERRYKETE---SSAVREELAKFIS 402 +LYG + +EGV+ ER Y T S ++ + +F Sbjct: 202 ALLYGGEA---------AAKLGTKPPRDYEGVVERFERIYLHTSGDLSERKQDVIRRFTR 252 Query: 403 NRPCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKE 462 + C C G RL AR V + ++ + I + +++ Sbjct: 253 STTCPDCHGDRLTEAARTATVLGRTIGELARLEITDLAALVTKVD-----DPAVAPVVRA 307 Query: 463 IGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQR 522 + RL+ ++ +GL YL L R+ +LSGGE+QRI+ +G+ L ++YV DEP++GLH Sbjct: 308 LTARLEAMITIGLGYLHLGRATTSLSGGESQRIKTVKHLGSSLTEMLYVFDEPTVGLHPH 367 Query: 523 DNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMA 582 D + L LRD GN+V+VVEHD D + AD +I++GPGAG GG +V +G ++ Sbjct: 368 DTPAMTALLEQLRDKGNSVLVVEHDPDVMAVADQIIEVGPGAGDDGGRLVFQGGFGELLE 427 Query: 583 VPESLTGQYMSGKRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVS 642 + TG+ + +R I VP + + A NNL+ VT+ LP G+ T +TGV+ Sbjct: 428 A-GTPTGRALRRRRPITP----VPRTGHGSITIADATRNNLRHVTVDLPAGVLTVLTGVA 482 Query: 643 GSGKSTLINDTLFPIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPA 702 GSGKS+L + + A + IDQ + RS P Sbjct: 483 GSGKSSLAAELVEQHAA--------------------------VVIDQKAVTTNRRSTPI 516 Query: 703 TYTGVFTPVRELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVP 762 T+TG+ VR FA + G + FS N G C C+G GVI ++ F+ Sbjct: 517 TWTGIAPAVRRTFA-----QRNGVSAALFSANSEGA-CPTCKGLGVIHTDLAFMDGQETV 570 Query: 763 CDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIR 822 C+ C G+RY E L + G +I ++ D+T++EA F A+ + L + DVGL Y+R Sbjct: 571 CESCDGRRYTAEVLAYQVAGLSIADIDDLTVDEAVRRFPD-RAVVKALGAIADVGLGYLR 629 Query: 823 LGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQG 882 LGQ TTLSGGE QR+K+AREL TLY+LDEPTTGLH DI LL +L +L D+G Sbjct: 630 LGQPLTTLSGGECQRLKIAREL-HDADKPTLYVLDEPTTGLHLNDIDTLLGILDQLVDRG 688 Query: 883 NTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFL 936 +T+VVIEHNLDVI+ ADW+VDLGP G GG +L GT + +A+ TA L Sbjct: 689 HTVVVIEHNLDVIRQADWVVDLGPGPGQHGGRVLYEGTVRDLM-TQATPTASAL 741 Score = 178 bits (451), Expect = 1e-42, Method: Composition-based stats. Identities = 65/169 (38%), Positives = 89/169 (52%), Gaps = 20/169 (11%) Query: 2 DKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYA 61 I +R ART+NL ++ IPR++L+V G+SGSGKSSL FDT+ AE + E+ +A Sbjct: 3 KHIRIREARTNNLAGLSADIPRNQLVVFAGISGSGKSSLVFDTVAAEAGHQLNETFPPFA 62 Query: 62 RQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPR-- 119 R L +PDV+ I+GLSP + I+Q+ N RSTVGTIT+ YLRLLF+R P Sbjct: 63 RNRLPRWSRPDVEEIDGLSPVVVIDQRRLGGNARSTVGTITDTWTYLRLLFSRTSTPYVG 122 Query: 120 -------------CPDHD--VPLAAQTVSQMVDNVLSQPEGKRLMLLAP 153 CP + V + +D S G +L P Sbjct: 123 ESGHFSFNDPAGMCPACAGLGEVVVSAVDRFLDLNKSLAAGA---ILLP 168 Score = 118 bits (297), Expect = 9e-25, Method: Composition-based stats. Identities = 49/156 (31%), Positives = 69/156 (44%), Gaps = 10/156 (6%) Query: 610 EKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAE 669 K +++ AR NNL ++ +P G+SGSGKS+L+ DT+ A QLN Sbjct: 2 GKHIRIREARTNNLAGLSADIPRNQLVVFAGISGSGKSSLVFDTVAAEAGHQLNETFPPF 61 Query: 670 PAPYR------DIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESRA 723 D++ ++ V+ IDQ +G RS T T +T +R LF+ Sbjct: 62 ARNRLPRWSRPDVEEIDGLSPVVVIDQRRLGGNARSTVGTITDTWTYLRLLFSRTSTPYV 121 Query: 724 RGYTPGRFSFNVRGGRCEACQGDGVIKVE--MHFLP 757 G FSFN G C AC G G + V FL Sbjct: 122 G--ESGHFSFNDPAGMCPACAGLGEVVVSAVDRFLD 155 Score = 74.2 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 38/132 (28%), Positives = 54/132 (40%), Gaps = 43/132 (32%) Query: 3 KIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYAR 62 I + A +NL+++ + +P L V+TG++GSGKSSLA AE VE Sbjct: 452 SITIADATRNNLRHVTVDLPAGVLTVLTGVAGSGKSSLA-----AE----LVEQH----- 497 Query: 63 QFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLR-----------LL 111 A+ I+QK+ + N RST T T I +R L Sbjct: 498 ------------------AAVVIDQKAVTTNRRSTPITWTGIAPAVRRTFAQRNGVSAAL 539 Query: 112 FARVGEPRCPDH 123 F+ E CP Sbjct: 540 FSANSEGACPTC 551 >UniRef50_B8I5E2 ABC transporter related n=4 Tax=Clostridium RepID=B8I5E2_CLOCE Length = 783 Score = 608 bits (1568), Expect = e-172, Method: Composition-based stats. Identities = 240/686 (34%), Positives = 365/686 (53%), Gaps = 37/686 (5%) Query: 262 ELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPELSLAGGAIRGWDRRNFYYFQML 321 L +F N+P G C C G G + D D++ + L + + G +R +ML Sbjct: 125 PLSMEMFQKNSPKGMCVKCLGSGTVKKVDEDKLFGDLSLKVEDVCL-GLGKRGS-TKKML 182 Query: 322 KSLADHYKFDVEAPWGSLSANVHKVVLYGSGKENIEFKYMNDRGDTSIRRHPFEGVLHNM 381 S ++ + SL+ + YG ++ + + P+ + H Sbjct: 183 DSFYKYHNISPDQKLSSLTDEQLFCLKYGDSGKS-----------SFMGFIPW--IFHVT 229 Query: 382 ERRYKETESSAVREELAKFISNRPCASCEGTRLRREARHVYVENTPLPAISDMSIGHAME 441 + + A +++ C C GT L A + + + ++ I + Sbjct: 230 NGAFSTNSRLSHLLTEAGYMTKPSCPKCGGTGLGVHASSTTIGGKTISELENIYIKDLFD 289 Query: 442 FFNNLKLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQI 501 F N L +L EI +L +V+VGL++L+LSR TLSGGE QR+ LAS I Sbjct: 290 FLNTTPLKR------SPLLNEILTKLSCMVDVGLHHLSLSRPVPTLSGGEIQRLFLASYI 343 Query: 502 GAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIG 561 A + +++V DEP+IGLH+ + E+L+ + +L + GNTVI VEHDE+ +R AD++ID+G Sbjct: 344 IAEMDSIIFVFDEPTIGLHEVEKEKLISIIRNLVNRGNTVIAVEHDENFMRCADYIIDLG 403 Query: 562 PGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEVPKKRVPANPEKVLKLTGARGN 621 P AG++GGE + +G E + S T Y+ + + N +K+LK+ A + Sbjct: 404 PFAGINGGERIFQGSFEEFLQCKHSNTAPYLKNNDILNMKSTYRTVNSDKILKVENANIH 463 Query: 622 NLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAE--------PAPY 673 NLK+VT+ +P+GL + GVSGSGKS+LI+DTL P + LN + + P Sbjct: 464 NLKNVTVDIPLGLMVGVAGVSGSGKSSLISDTLVPKLKILLNNKFVGDQNEDNEGIPEDN 523 Query: 674 RDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESRARGYTPGRFSF 733 I G E K + IDQ PIGR+ S PATYTGVF +R LFA + G + G F+ Sbjct: 524 SVISGWERIKKCLVIDQKPIGRSRTSCPATYTGVFDRIRALFA-----KESGSSAGLFTV 578 Query: 734 NVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKYKGKTIHEVLDMTI 793 N GG C+ C+GDG + + F I C+ C G + E LE+ GK I EVL T+ Sbjct: 579 NSEGG-CKVCKGDGEVHYHVGFGNFIDTECEACSGTGFIPEALEVTLNGKNIKEVLSFTV 637 Query: 794 EEAREFFDAV-PALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSK-RGTGQ 851 +EA FF + + L TL VG+ YI LGQ T+SGGE+QR+KLA+ELSK + Sbjct: 638 DEAVLFFKGRDKQIDKILATLQRVGMGYITLGQKTPTISGGESQRIKLAKELSKGQAAKD 697 Query: 852 TLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADWIVDLGPEGGSG 911 +YILDEPTTGL F D +L+ ++ +L +GNT++V EH+ ++ D+I ++GP GGS Sbjct: 698 AVYILDEPTTGLSFHDSVRLMKLMEELVTKGNTVIVTEHDPYILSNCDYIFEMGPGGGSD 757 Query: 912 GGEILVSGTPETVAECEASHTARFLK 937 GG+++ +G+P + + S R+LK Sbjct: 758 GGKLIAAGSPVDLKNNQNSIIGRYLK 783 Score = 164 bits (415), Expect = 2e-38, Method: Composition-based stats. Identities = 63/131 (48%), Positives = 86/131 (65%), Gaps = 6/131 (4%) Query: 2 DKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYA 61 D IE++ AR HNLK I++ IP++KL V+TG+SGSGKSSLAFDTLY EG+RRY+ ++ Sbjct: 3 DFIEIKNARIHNLKGIDVKIPKNKLTVITGVSGSGKSSLAFDTLYEEGKRRYL----MFS 58 Query: 62 RQFLSLMEKPDVDHIEGLSPAISIEQKSTSH-NPRSTVGTITEIHDYLRLLFARVGEPRC 120 + P D I GLSP +++EQ+ NPRSTVGT T+I + L +LFA G Sbjct: 59 GTQFMIDSTPTFDSISGLSPTVAVEQRIIRQSNPRSTVGTRTKIGNILAMLFAAYGTRDS 118 Query: 121 P-DHDVPLAAQ 130 D +PL+ + Sbjct: 119 KYDDGLPLSME 129 Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats. Identities = 56/192 (29%), Positives = 82/192 (42%), Gaps = 20/192 (10%) Query: 612 VLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQL-----NGAT 666 +++ AR +NLK + + +P T ITGVSGSGKS+L DTL+ +R+ Sbjct: 4 FIEIKNARIHNLKGIDVKIPKNKLTVITGVSGSGKSSLAFDTLYEEGKRRYLMFSGTQFM 63 Query: 667 IAEPAPYRDIQGLEHFDKVIDIDQSPIGRT-PRSNPATYTGVFTPVRELFA--GVPESRA 723 I + I GL + ++Q I ++ PRS T T + + LFA G +S+ Sbjct: 64 IDSTPTFDSISGLSP---TVAVEQRIIRQSNPRSTVGTRTKIGNILAMLFAAYGTRDSKY 120 Query: 724 R---GYTPGRFSFNVRGGRCEACQGDGVIK--VEMHFLPDIYVPC-DQCKGKRYNRET-- 775 + F N G C C G G +K E D+ + D C G T Sbjct: 121 DDGLPLSMEMFQKNSPKGMCVKCLGSGTVKKVDEDKLFGDLSLKVEDVCLGLGKRGSTKK 180 Query: 776 -LEIKYKGKTIH 786 L+ YK I Sbjct: 181 MLDSFYKYHNIS 192 Score = 89.2 bits (220), Expect = 7e-16, Method: Composition-based stats. Identities = 39/118 (33%), Positives = 57/118 (48%), Gaps = 7/118 (5%) Query: 2 DKI-EVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAY 60 DKI +V A HNLKN+ + IP ++ V G+SGSGKSSL DTL + + Sbjct: 452 DKILKVENANIHNLKNVTVDIPLGLMVGVAGVSGSGKSSLISDTLVPKLKILLNNKF--V 509 Query: 61 ARQFLSLMEKPDVDHI----EGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFAR 114 Q P+ + + E + + I+QK + S T T + D +R LFA+ Sbjct: 510 GDQNEDNEGIPEDNSVISGWERIKKCLVIDQKPIGRSRTSCPATYTGVFDRIRALFAK 567 >UniRef50_A6VPU1 ABC transporter related n=1 Tax=Actinobacillus succinogenes 130Z RepID=A6VPU1_ACTSZ Length = 754 Score = 607 bits (1565), Expect = e-172, Method: Composition-based stats. Identities = 236/730 (32%), Positives = 370/730 (50%), Gaps = 75/730 (10%) Query: 221 FETALELSGGTAVVADMDDPKAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTC 280 E + + V D L + P G SM +S N+P G CP C Sbjct: 87 VEQKTAGANARSTVGTAVDIAPLLRLMFSRIGEPSAGGSMA------YSPNHPLGMCPHC 140 Query: 281 DGLGVQQYFDPDRVIQNPELSLAGGAI------RGWDRRNFYYFQMLKSLADHYKFDVEA 334 GLG Q D R+ + SL+ GAI GW + +L + + Sbjct: 141 TGLGEQLVLDESRLF-DVNKSLSEGAILFSQFSAGWQTYLYQANPLLSA---------DK 190 Query: 335 PWGSLSANVHKVVLYGSGKE-NIEFKYMNDRGDTSIRRHPFEGVLHNMERRYKETE---- 389 S +++ GS + IE + N + + +EGVL R Y + Sbjct: 191 KLRDFSDKEWEILKNGSEQPIKIEIRSNNTG---RVDKVDYEGVLPRFRRLYLSRDISKL 247 Query: 390 SSAVREELAKFISNRPCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLA 449 ++++E+A + C C+G+ L +A + + ++ G + + Sbjct: 248 KQSLQDEIASLVHQGECPHCQGSGLNEKALASKINGNNILHFQSLTAGELLGELQRIT-- 305 Query: 450 GQRAKIAEKILKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVM 509 + + + +++ L + +G+NYL+++R +TLSG E QR+++ + L + Sbjct: 306 ---HPVGKSLAEQMCGTLGKMAEIGINYLSMNRPTDTLSGEELQRLKMVRHLDGSLNNIT 362 Query: 510 YVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGG 569 Y+ DEP+ GLH D +++ L LRD N V+VVEH+ I AD ++++G AG GG Sbjct: 363 YIFDEPTAGLHPADAQKIGRILQQLRDRHNNVLVVEHNRQMIELADEIVELGERAGSQGG 422 Query: 570 EVVAEGPLEAIMAVPESLTGQYMSGKRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLT 629 ++V +G + + E+LT + + K ++ + P + L + +NLK+V+ Sbjct: 423 KIVYQGDIHKLRQA-ETLTAKMLMEKVRLNL----APLAWTESFALENIKLHNLKNVSTV 477 Query: 630 LPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDID 689 +P G+ T I+GV+GSGKS+L + + + + ID Sbjct: 478 IPKGVLTAISGVAGSGKSSLAQAF-------------------------VRRYSEAVFID 512 Query: 690 QSPIGRTPRSNPATYTGVFTPVRELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVI 749 Q PIG + RS PATYTGV +R+LFA +A G FSFN +GG C C+G G I Sbjct: 513 QKPIGTSVRSTPATYTGVMDDIRKLFA-----KANGTDASMFSFNAKGG-CPVCKGTGQI 566 Query: 750 KVEMHFLPDIYVPCDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARK 809 +M F + V C++C G+RY+R L Y+GK I +VL +TIE+A EFFD P + + Sbjct: 567 SYDMAFAEPVVVQCEECGGRRYSRTALSFHYQGKNIEDVLALTIEQAAEFFDN-PKICKA 625 Query: 810 LQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQ 869 LQ+L+DVGL Y+ LGQ +TLSGGE QRVKLA EL + G +Y+LDEP+TGLH D Sbjct: 626 LQSLLDVGLGYLTLGQPTSTLSGGEVQRVKLAAELQQSG---KIYVLDEPSTGLHQNDAM 682 Query: 870 QLLDVLHKLRDQGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEA 929 QLL +L +L GNT++++EH L++I ADW++D+G GGS GG+++ +GT + C+ Sbjct: 683 QLLSLLRQLVKNGNTVIIVEHRLELIAAADWVIDMGEGGGSAGGKVMFAGTVAELLNCKR 742 Query: 930 SHTARFLKPM 939 S TA+FL Sbjct: 743 SKTAKFLAEY 752 Score = 174 bits (441), Expect = 2e-41, Method: Composition-based stats. Identities = 74/195 (37%), Positives = 105/195 (53%), Gaps = 17/195 (8%) Query: 403 NRPCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKE 462 C C G R R A + + + + ++I A EFF+N + Sbjct: 577 VVQCEECGGRRYSRTALSFHYQGKNIEDVLALTIEQAAEFFDN---------------PK 621 Query: 463 IGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQR 522 I L+ L++VGL YLTL + TLSGGE QR++LA+++ G +YVLDEPS GLHQ Sbjct: 622 ICKALQSLLDVGLGYLTLGQPTSTLSGGEVQRVKLAAELQQS--GKIYVLDEPSTGLHQN 679 Query: 523 DNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMA 582 D +LL L L GNTVI+VEH + I AAD VID+G G G GG+V+ G + ++ Sbjct: 680 DAMQLLSLLRQLVKNGNTVIIVEHRLELIAAADWVIDMGEGGGSAGGKVMFAGTVAELLN 739 Query: 583 VPESLTGQYMSGKRK 597 S T ++++ K Sbjct: 740 CKRSKTAKFLAEYSK 754 Score = 168 bits (425), Expect = 1e-39, Method: Composition-based stats. Identities = 98/380 (25%), Positives = 149/380 (39%), Gaps = 69/380 (18%) Query: 2 DKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYA 61 D+I++ A +NLK+I L +P+ KL+V G+SGSGKSSL FDTL E R++ Y Sbjct: 4 DQIQIIDAHENNLKHIKLTLPKGKLVVFVGVSGSGKSSLVFDTLAVESYRQWQAGYPLYL 63 Query: 62 RQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPR-- 119 R + E+P + I GL+PA+ +EQK+ N RSTVGT +I LRL+F+R+GEP Sbjct: 64 RNKMPHYERPKIGAIYGLTPAVVVEQKTAGANARSTVGTAVDIAPLLRLMFSRIGEPSAG 123 Query: 120 -------------CPDH---DVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHT 163 CP L S++ D S EG +L + Sbjct: 124 GSMAYSPNHPLGMCPHCTGLGEQLVLDE-SRLFDVNKSLSEGA---ILFSQFSAGWQTYL 179 Query: 164 KTLENLASQGYIRARIDGEVCDLSD--PPKLELQKKHTIEVVVDRFKVRDDLTQRLAESF 221 L S D ++ D SD L+ + I + ++R + T R+ Sbjct: 180 YQANPLLS-------ADKKLRDFSDKEWEILKNGSEQPI-----KIEIRSNNTGRV---- 223 Query: 222 ETALELSGGTAVVADMDDPKAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCD 281 D D + F + + L+ + S G CP C Sbjct: 224 --------------DKVDYEGVLPRFRRLYLSRDISKLKQSLQDEIASL-VHQGECPHCQ 268 Query: 282 GLGVQQYFDPDRVIQNPEL---SLAGGAIRG------WDRRNFYYFQMLKSLADHYKF-- 330 G G+ + ++ N L SL G + G QM +L + Sbjct: 269 GSGLNEKALASKINGNNILHFQSLTAGELLGELQRITHPVGKSLAEQMCGTLGKMAEIGI 328 Query: 331 ---DVEAPWGSLSANVHKVV 347 + P +LS + + Sbjct: 329 NYLSMNRPTDTLSGEELQRL 348 Score = 95.0 bits (235), Expect = 1e-17, Method: Composition-based stats. Identities = 43/142 (30%), Positives = 60/142 (42%), Gaps = 8/142 (5%) Query: 613 LKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQ------LNGAT 666 +++ A NNLK + LTLP G GVSGSGKS+L+ DTL + RQ L Sbjct: 6 IQIIDAHENNLKHIKLTLPKGKLVVFVGVSGSGKSSLVFDTLAVESYRQWQAGYPLYLRN 65 Query: 667 IAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESRARGY 726 I + + ++Q G RS T + +R +F+ + E A G Sbjct: 66 KMPHYERPKIGAIYGLTPAVVVEQKTAGANARSTVGTAVDIAPLLRLMFSRIGEPSAGGS 125 Query: 727 TPGRFSFNVRGGRCEACQGDGV 748 +S N G C C G G Sbjct: 126 MA--YSPNHPLGMCPHCTGLGE 145 Score = 89.2 bits (220), Expect = 6e-16, Method: Composition-based stats. Identities = 41/160 (25%), Positives = 64/160 (40%), Gaps = 45/160 (28%) Query: 2 DKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYA 61 + + + HNLKN++ VIP+ L ++G++GSGKSSLA A+ Sbjct: 459 ESFALENIKLHNLKNVSTVIPKGVLTAISGVAGSGKSSLA----------------QAFV 502 Query: 62 RQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARV------ 115 R++ S A+ I+QK + RST T T + D +R LFA+ Sbjct: 503 RRY---------------SEAVFIDQKPIGTSVRSTPATYTGVMDDIRKLFAKANGTDAS 547 Query: 116 --------GEPRCPDHDVPLAAQTVSQMVDNVLSQPEGKR 147 G P C ++ V + G+R Sbjct: 548 MFSFNAKGGCPVCKGTGQISYDMAFAEPVVVQCEECGGRR 587 >UniRef50_C7NL29 Excinuclease ATPase subunit n=1 Tax=Kytococcus sedentarius DSM 20547 RepID=C7NL29_KYTSD Length = 875 Score = 606 bits (1563), Expect = e-171, Method: Composition-based stats. Identities = 247/722 (34%), Positives = 352/722 (48%), Gaps = 73/722 (10%) Query: 253 CPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPELSLAGGAIRGWDR 312 C L+ FS N GACP C GLGV ++ +P+LS+A GAI W Sbjct: 135 CGDYPTGAAHLDSDAFSVNTAVGACPECSGLGVVHEPTEASMVPDPDLSIAEGAIAAW-- 192 Query: 313 RNFYYFQMLKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKENIEFKYMNDRGD-TSIRR 371 + + + + +D+ + W L A + +L+ + ++ D Sbjct: 193 PGAWQGKNYRDITATLGYDITSSWRDLPAADRQWILFTDDQPVVQVVPERDPERIQRPYS 252 Query: 372 HPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGTRLRREARHVYVENTPLPAI 431 F + R ET+S+ +F+ PC +C+G LR +A V + LP Sbjct: 253 GTFSSARRYLMRTLSETKSATQWARALRFVETTPCPACDGHGLRADALAVTWQGRSLPDA 312 Query: 432 SDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDRLKF------LVNVGLNYLTLSRSAE 485 + + + + + A + + E L+ +GL +L+L R + Sbjct: 313 AALPLAELADLARRRRHALPDEGGSAREGAERLLLGDLLARLDVLLELGLGHLSLGRRST 372 Query: 486 TLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVE 545 T+S GE QR+RLA+ + GL GV+YVLDEPS GLH RD E LL L L D GNTV+VVE Sbjct: 373 TVSPGEMQRLRLATLLHTGLFGVVYVLDEPSAGLHPRDTEALLRVLRRLVDAGNTVLVVE 432 Query: 546 HDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYM------------- 592 HD + A D V+D+GPGAG GG V+ GP++ + V ES+TG+Y+ Sbjct: 433 HDMAVVAACDWVVDVGPGAGEGGGRVLHSGPVDELAGVAESVTGRYLAQPIHPAEVLGAD 492 Query: 593 ---------SGKRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSG 643 + + P L +G R + ++ V LTLP+G + +TGVSG Sbjct: 493 ATGGSTSAGTPGDDLAAEPLPAPRTGSGQLVASGLRRHTVRGVDLTLPLGAVSVVTGVSG 552 Query: 644 SGKSTLINDTLFPIAQRQLNGATIA----------------------------------- 668 SGKS+L+ D L + + Sbjct: 553 SGKSSLL-DALADVVAMHAQEVSTEAAEEHGEPGTQDVGHPGEGHPGEDAAGAALTASGT 611 Query: 669 ------EPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESR 722 PAP R + ++++ I Q PIGR+PRS ATYTG +R LFA +++ Sbjct: 612 GTGQGTPPAPARVVLTGGRVERLVRITQKPIGRSPRSTLATYTGAMDRIRSLFAATDDAQ 671 Query: 723 ARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKYKG 782 RGY GRFSFN GRC C+G G + VE+ F+P Y C +C G RY+ ETL++ ++G Sbjct: 672 ERGYGAGRFSFNTTPGRCPTCEGQGSVSVELLFMPGTYSTCPECHGARYDAETLQVHWEG 731 Query: 783 KTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLAR 842 I EVL T+ EARE F P LAR L D+GL Y+ LG AT LSGGEAQR+KLA Sbjct: 732 HRIDEVLGWTVAEARERFAEHPQLARTFGALADLGLDYLTLGHPATDLSGGEAQRIKLAT 791 Query: 843 ELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADWIV 902 EL + TLY+ DEPTTGLH AD+ +LL LH L +T+V+ EH+ + TAD +V Sbjct: 792 ELRVQRRTPTLYLFDEPTTGLHPADVHRLLRQLHGLAGASHTVVLAEHDAVAVATADHVV 851 Query: 903 DL 904 ++ Sbjct: 852 EM 853 Score = 148 bits (374), Expect = 1e-33, Method: Composition-based stats. Identities = 56/117 (47%), Positives = 84/117 (71%), Gaps = 2/117 (1%) Query: 3 KIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYAR 62 I V GAR HNL+++ + IPRD+L+ VTG+SGSGKSSLAF T++AE QRRY E+++ +AR Sbjct: 21 HITVTGARLHNLRDVTVSIPRDRLVAVTGVSGSGKSSLAFGTVHAEAQRRYFETVAPFAR 80 Query: 63 QFLSLMEKPDVDHIEGLSPAISIEQKS--TSHNPRSTVGTITEIHDYLRLLFARVGE 117 + + P V I GL PA+++ Q++ + + RSTVGT+T + LR++F+R G+ Sbjct: 81 RLIHAAVDPQVRSITGLPPAVALGQQATTSGTSSRSTVGTVTHTGNTLRMVFSRCGD 137 Score = 143 bits (360), Expect = 4e-32, Method: Composition-based stats. Identities = 66/199 (33%), Positives = 105/199 (52%), Gaps = 23/199 (11%) Query: 761 VPCDQCKGKRYNRETLEIKYKGKTIHEVLDM---------------------TIEEAREF 799 PC C G + L + ++G+++ + + + E E Sbjct: 285 TPCPACDGHGLRADALAVTWQGRSLPDAAALPLAELADLARRRRHALPDEGGSAREGAER 344 Query: 800 FDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEP 859 + L +L L+++GL ++ LG+ +TT+S GE QR++LA L G +Y+LDEP Sbjct: 345 -LLLGDLLARLDVLLELGLGHLSLGRRSTTVSPGEMQRLRLAT-LLHTGLFGVVYVLDEP 402 Query: 860 TTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSG 919 + GLH D + LL VL +L D GNT++V+EH++ V+ DW+VD+GP G GGG +L SG Sbjct: 403 SAGLHPRDTEALLRVLRRLVDAGNTVLVVEHDMAVVAACDWVVDVGPGAGEGGGRVLHSG 462 Query: 920 TPETVAECEASHTARFLKP 938 + +A S T R+L Sbjct: 463 PVDELAGVAESVTGRYLAQ 481 Score = 86.1 bits (212), Expect = 7e-15, Method: Composition-based stats. Identities = 47/165 (28%), Positives = 71/165 (43%), Gaps = 12/165 (7%) Query: 606 PANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGA 665 PA+ + + +TGAR +NL+DVT+++P +TGVSGSGKS+L T+ AQR+ Sbjct: 15 PASSDGHITVTGARLHNLRDVTVSIPRDRLVAVTGVSGSGKSSLAFGTVHAEAQRRYFET 74 Query: 666 TIAEPAPYRDIQGLEHFDKV------IDIDQSP--IGRTPRSNPATYTGVFTPVRELFAG 717 + + + Q G + RS T T +R +F+ Sbjct: 75 VAPFARRLIHAAVDPQVRSITGLPPAVALGQQATTSGTSSRSTVGTVTHTGNTLRMVFSR 134 Query: 718 VPE--SRARGYTPGRFSFNVRGGRCEACQGDGVIK--VEMHFLPD 758 + + A FS N G C C G GV+ E +PD Sbjct: 135 CGDYPTGAAHLDSDAFSVNTAVGACPECSGLGVVHEPTEASMVPD 179 Score = 73.8 bits (180), Expect = 3e-11, Method: Composition-based stats. Identities = 41/157 (26%), Positives = 59/157 (37%), Gaps = 36/157 (22%) Query: 3 KIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTL-------YAEGQRRYVE 55 ++ G R H ++ ++L +P + VVTG+SGSGKSSL D L E E Sbjct: 521 QLVASGLRRHTVRGVDLTLPLGAVSVVTGVSGSGKSSL-LDALADVVAMHAQEVSTEAAE 579 Query: 56 SLSAYARQFLSLM--EKPDVDHI------------EGLSPA--------------ISIEQ 87 Q + P D +G PA + I Q Sbjct: 580 EHGEPGTQDVGHPGEGHPGEDAAGAALTASGTGTGQGTPPAPARVVLTGGRVERLVRITQ 639 Query: 88 KSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCPDHD 124 K +PRST+ T T D +R LFA + + + Sbjct: 640 KPIGRSPRSTLATYTGAMDRIRSLFAATDDAQERGYG 676 >UniRef50_B7GTR5 ABC transporter related n=26 Tax=Bacteria RepID=B7GTR5_BIFLI Length = 862 Score = 605 bits (1559), Expect = e-171, Method: Composition-based stats. Identities = 244/805 (30%), Positives = 386/805 (47%), Gaps = 61/805 (7%) Query: 175 IRARIDGEVCDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVV 234 RA++D + P L L ++ T+ + F +L L L S + V Sbjct: 75 SRAQVDEVLHV---PAALALHQRPTVPGIRSTFGTMTELLNSLR------LLFSRVASHV 125 Query: 235 ADMDDPKAEELLFSAN---FACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDP 291 + E L A C CG +FN+ AGACPTC G G+ + + Sbjct: 126 CSHCGARNEPTLNVAAGLPITCVSCGKEFHAPGAESLAFNS-AGACPTCSGNGIVREVNR 184 Query: 292 DRVIQNPELSLAGGAIRGWDRRNFYYFQMLKSLADHYKFDVEAPWGSLSANVHKVVLYGS 351 ++ + + GA+ W + ++K + P+ L+ +V G Sbjct: 185 AALVPDESKRIDDGAVLPW---GSLMWDLMKQVCGAMGVRTNVPFSELTPEERDIVFNGP 241 Query: 352 G-KENIEFKYMNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCE 410 K++I +K + F V +E + + + +A+F+ PCA C Sbjct: 242 AVKKHILYKPKKGDDFAELDFTYFNAVYT-VENALAKAKDEKGLKRVARFLKEGPCADCS 300 Query: 411 GTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLK--LAGQRAKIAEKILKEIGDRLK 468 GTRL AR +V L M++ A ++ + L +A I + D + Sbjct: 301 GTRLSAVARAPHVRGLNLAEAGAMTLDAAADWVRGVPESLRPDMRPMATNICESFLDVAR 360 Query: 469 FLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLL 528 L+++GL YL L R+ TLS GE QR++LA + GV+YVLDEPSIGLH + + LL Sbjct: 361 RLLDLGLGYLALDRAGATLSTGERQRVQLARAVRNRTTGVLYVLDEPSIGLHPSNVDGLL 420 Query: 529 GTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLT 588 G + L GN+V+VV+HD ++A DH+I++G AG GG V+ +G + + A P S Sbjct: 421 GVMYDLVADGNSVVVVDHDVRVLKACDHLIEMGLVAGAEGGHVIVQGTVGEVAANPSSRI 480 Query: 589 GQYMSGKRKIEVPKKRVPAN--PEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGK 646 ++S + + ++ + +++T ++ + +K + + +P G +TGVSGSGK Sbjct: 481 APFLSDQVSARIRERVAESQVFSLGHIRMTTSQLHTVKPLDVDIPRGRLVAVTGVSGSGK 540 Query: 647 STLINDTLFPIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTG 706 +T++ ++L P + Q G + E +G ++ ID +PIG RS ATY Sbjct: 541 TTVVLESLIPALKAQAAGERLPEHVLELKAEG---INRANLIDATPIGANVRSTVATYAD 597 Query: 707 VFTPVRELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQC 766 + +R FA +++A G+ G FS+N RC C G G I +++ FLPD+ + C C Sbjct: 598 IHDELRRAFARADDAKAGGWKAGDFSYNTGRLRCPTCDGTGSISLDVQFLPDVTIECPDC 657 Query: 767 KGKRYNRETLEIKYK-------------------------------GKTIH----EVLDM 791 G RY E I+ G I +++ M Sbjct: 658 GGSRYASEADAIRRAVKAAKGKAAKMKVPDKRKAAKEKLSEATGQGGGNISLSLPQLMAM 717 Query: 792 TIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQ 851 ++++A + + +L TL D+GL Y+ LG+ LSGGEAQR+KLA E+ K + Sbjct: 718 SVDQALAVTSDLKKVHARLTTLHDLGLGYLTLGEPTPALSGGEAQRLKLASEMGKAQSD- 776 Query: 852 TLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADWIVDLGPEGGSG 911 +++ DEPT GLH D++ LL V +L G T+VVIEH+LDVI ADWI+D+GP GG Sbjct: 777 AVFVFDEPTIGLHPFDVRVLLGVFDRLVASGATVVVIEHDLDVIANADWIIDMGPGGGES 836 Query: 912 GGEILVSGTPETVAECEASHTARFL 936 GG I+ +GTPE +A S T R+L Sbjct: 837 GGRIVATGTPEQIAANPNSITGRYL 861 Score = 174 bits (442), Expect = 1e-41, Method: Composition-based stats. Identities = 61/123 (49%), Positives = 81/123 (65%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 63 IEVRGAR HNLKNI++ IP +L+ V G+SGSGKSSLA LYAEG RRY+E+LS Y R+ Sbjct: 10 IEVRGARVHNLKNIDIDIPLCELVGVAGVSGSGKSSLALGVLYAEGSRRYLEALSTYTRR 69 Query: 64 FLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCPDH 123 L+ + VD + + A+++ Q+ T RST GT+TE+ + LRLLF+RV C Sbjct: 70 RLTQASRAQVDEVLHVPAALALHQRPTVPGIRSTFGTMTELLNSLRLLFSRVASHVCSHC 129 Query: 124 DVP 126 Sbjct: 130 GAR 132 Score = 154 bits (389), Expect = 2e-35, Method: Composition-based stats. Identities = 76/223 (34%), Positives = 103/223 (46%), Gaps = 49/223 (21%) Query: 406 CASCEGTRLRREARHVY-------------------------------VENTPL----PA 430 C C G+R EA + + P Sbjct: 654 CPDCGGSRYASEADAIRRAVKAAKGKAAKMKVPDKRKAAKEKLSEATGQGGGNISLSLPQ 713 Query: 431 ISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTLSRSAETLSGG 490 + MS+ A+ ++LK ++ RL L ++GL YLTL LSGG Sbjct: 714 LMAMSVDQALAVTSDLK--------------KVHARLTTLHDLGLGYLTLGEPTPALSGG 759 Query: 491 EAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDA 550 EAQR++LAS++G ++V DEP+IGLH D LLG L G TV+V+EHD D Sbjct: 760 EAQRLKLASEMGKAQSDAVFVFDEPTIGLHPFDVRVLLGVFDRLVASGATVVVIEHDLDV 819 Query: 551 IRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMS 593 I AD +ID+GPG G GG +VA G E I A P S+TG+Y+ Sbjct: 820 IANADWIIDMGPGGGESGGRIVATGTPEQIAANPNSITGRYLC 862 Score = 90.4 bits (223), Expect = 3e-16, Method: Composition-based stats. Identities = 42/172 (24%), Positives = 67/172 (38%), Gaps = 35/172 (20%) Query: 613 LKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAEPAP 672 +++ GAR +NLK++ + +P+ + GVSGSGKS+L L+ R+ A Sbjct: 10 IEVRGARVHNLKNIDIDIPLCELVGVAGVSGSGKSSLALGVLYAEGSRRYLEALSTYTRR 69 Query: 673 YRDIQGLEHFDKVIDI------DQSPIGRTPRSNPATYTGVFTPVRELFAGVPE------ 720 D+V+ + Q P RS T T + +R LF+ V Sbjct: 70 RLTQASRAQVDEVLHVPAALALHQRPTVPGIRSTFGTMTELLNSLRLLFSRVASHVCSHC 129 Query: 721 -SRARG-------------------YTPGRFS--FNVRGGRCEACQGDGVIK 750 +R + PG S FN G C C G+G+++ Sbjct: 130 GARNEPTLNVAAGLPITCVSCGKEFHAPGAESLAFNSAGA-CPTCSGNGIVR 180 Score = 85.4 bits (210), Expect = 9e-15, Method: Composition-based stats. Identities = 42/142 (29%), Positives = 65/142 (45%), Gaps = 28/142 (19%) Query: 1 MDKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLY-AEGQRRYVESLSA 59 + I + ++ H +K +++ IPR +L+ VTG+SGSGK+++ ++L A + E L Sbjct: 504 LGHIRMTTSQLHTVKPLDVDIPRGRLVAVTGVSGSGKTTVVLESLIPALKAQAAGERLPE 563 Query: 60 YARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARV---- 115 + + EG++ A I+ N RSTV T +IHD LR FAR Sbjct: 564 HVLEL----------KAEGINRANLIDATPIGANVRSTVATYADIHDELRRAFARADDAK 613 Query: 116 -------------GEPRCPDHD 124 G RCP D Sbjct: 614 AGGWKAGDFSYNTGRLRCPTCD 635 >UniRef50_D1AQT8 ABC transporter related protein n=1 Tax=Sebaldella termitidis ATCC 33386 RepID=D1AQT8_SEBTE Length = 752 Score = 602 bits (1552), Expect = e-170, Method: Composition-based stats. Identities = 251/799 (31%), Positives = 408/799 (51%), Gaps = 86/799 (10%) Query: 144 EGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARIDGEVCDLSDPPKLELQKKHTIEVV 203 GK ++ I + + ++T + Q + + PK++ + ++ Sbjct: 35 SGKSSLVFDTIASQSQRLLSETFSSYIQQ----------LLPHYEQPKVDRISNLPVSII 84 Query: 204 VDRFKVRDDLTQRLAESFETALELSGGTAVVADMDDPKAEELLFSANFACPICGYSMREL 263 +++ K+ + V + D A L + A P GYSM Sbjct: 85 INQNKITGNARS-----------------TVGTITDIYASLRLLFSRIAKPFIGYSMN-- 125 Query: 264 EPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPELSLAGGAIRGWDRRNFYYFQMLKS 323 +SFN+P G CP C GLGV + + +I N E SL GA++ ++ L Sbjct: 126 ----YSFNSPEGMCPKCKGLGVIKEINIKSLI-NFEKSLNSGAVQFPTFQS--GGWRLTR 178 Query: 324 LADHYKFDVEAPWGSLSANVHKVVLYGSGKENIEFKYMNDRGDTSIRRHPFEGVLHNMER 383 + FD + ++N ++LY +G K + R + G++ + + Sbjct: 179 YTESGNFDNDKKIKEYTSNELSMLLYNTGSSP---KSPTKNWHKTAR---YVGLIPRITK 232 Query: 384 RYKETESSAVREELAKFISNRPCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFF 443 + ET+++ +++L + + R C C GTR+ ++ R + N + +S+ F Sbjct: 233 AFIETDNTKYKKDLERILEIRICTECSGTRVNKKVRSAKILNNSISDCVSLSLDELRIFL 292 Query: 444 NNLKLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGA 503 + +K E IL ++ +L+ L ++GL+YLTL+R+ TLSGGE+QRI++A + + Sbjct: 293 DKIKEPE-----VEIILMDLKTKLESLQSLGLSYLTLNRATTTLSGGESQRIKIAKHLNS 347 Query: 504 GLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPG 563 L ++Y+ DE S GLH D ++ L L+ GNT+I+V+HD D I+ ADH+I++G G Sbjct: 348 SLSDILYIFDELSTGLHPEDLTGIIKILYKLKQKGNTIILVDHDPDIIKIADHIINLGEG 407 Query: 564 AGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEVPKKRVPANPEKVLKLTGARGNNL 623 AGV+GG V +G E ++A ++LT + ++ + K+ N ++ +L NN+ Sbjct: 408 AGVNGGCVTYQGTYEGLLA-SDTLTSKALNTSHLLNNKKR----NFQEFYELQNVSLNNI 462 Query: 624 KDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAEPAPYRDIQGLEHFD 683 K++++ +P FT +TGV+GSGKS+LI F Sbjct: 463 KNISIKIPKNAFTVVTGVAGSGKSSLIRHLFKN------------------------KFS 498 Query: 684 KVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESRARGYTPGRFSFNVRGGRCEAC 743 + +DQSP+ + RSN +Y GVF ++ LF+ V FS+N +G C C Sbjct: 499 DAMILDQSPVHSSSRSNILSYLGVFDTIKTLFSKVSSKNI-----SHFSYNGKGA-CPVC 552 Query: 744 QGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFD-- 801 +G G IK+++ FL D C+ C+GKR+N ETL YK K I +VL++T++EA FFD Sbjct: 553 KGKGYIKLDLAFLGDTKQLCEGCRGKRFNNETLSYYYKNKNIDDVLNLTVKEAESFFDDT 612 Query: 802 AVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTT 861 L+R L L L Y++LGQS T SGGE QR+K+A+ L ++ L ILDEP+T Sbjct: 613 NSEKLSRMLSCLTMANLDYLKLGQSLDTFSGGELQRLKIAKTLFEK--NSKLLILDEPST 670 Query: 862 GLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTP 921 GLH +D+Q LL++ L GNT++V+EHNL +I A+WI+DLG GG GG+I+ G P Sbjct: 671 GLHESDVQNLLELFFVLVKNGNTLIVLEHNLSIISQAEWIIDLGLYGGVLGGKIIFQGYP 730 Query: 922 ETVAECEASHTARFLKPML 940 + + S TA+ LK L Sbjct: 731 GDIIDHPVSLTAKHLKKFL 749 Score = 187 bits (474), Expect = 2e-45, Method: Composition-based stats. Identities = 66/138 (47%), Positives = 87/138 (63%), Gaps = 15/138 (10%) Query: 1 MDKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAY 60 MD I++ ART+NLKNI+L IP+ K+IVVTG+SGSGKSSL FDT+ ++ QR E+ S+Y Sbjct: 1 MDNIQIINARTNNLKNISLEIPKRKIIVVTGISGSGKSSLVFDTIASQSQRLLSETFSSY 60 Query: 61 ARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPR- 119 +Q L E+P VD I L +I I Q + N RSTVGTIT+I+ LRLLF+R+ +P Sbjct: 61 IQQLLPHYEQPKVDRISNLPVSIIINQNKITGNARSTVGTITDIYASLRLLFSRIAKPFI 120 Query: 120 --------------CPDH 123 CP Sbjct: 121 GYSMNYSFNSPEGMCPKC 138 Score = 150 bits (378), Expect = 3e-34, Method: Composition-based stats. Identities = 61/198 (30%), Positives = 101/198 (51%), Gaps = 13/198 (6%) Query: 402 SNRPCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILK 461 + + C C G R E Y +N + + ++++ A FF++ + Sbjct: 568 TKQLCEGCRGKRFNNETLSYYYKNKNIDDVLNLTVKEAESFFDDTN------------SE 615 Query: 462 EIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQ 521 ++ L L L+YL L +S +T SGGE QR+++A + + +LDEPS GLH+ Sbjct: 616 KLSRMLSCLTMANLDYLKLGQSLDTFSGGELQRLKIAKTLFEK-NSKLLILDEPSTGLHE 674 Query: 522 RDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIM 581 D + LL L GNT+IV+EH+ I A+ +ID+G GV GG+++ +G I+ Sbjct: 675 SDVQNLLELFFVLVKNGNTLIVLEHNLSIISQAEWIIDLGLYGGVLGGKIIFQGYPGDII 734 Query: 582 AVPESLTGQYMSGKRKIE 599 P SLT +++ KI+ Sbjct: 735 DHPVSLTAKHLKKFLKIK 752 Score = 111 bits (279), Expect = 1e-22, Method: Composition-based stats. Identities = 48/144 (33%), Positives = 79/144 (54%), Gaps = 8/144 (5%) Query: 613 LKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLN---GATIAE 669 +++ AR NNLK+++L +P +TG+SGSGKS+L+ DT+ +QR L+ + I + Sbjct: 4 IQIINARTNNLKNISLEIPKRKIIVVTGISGSGKSSLVFDTIASQSQRLLSETFSSYIQQ 63 Query: 670 PAPYRDIQGLEHFDKV---IDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESRARGY 726 P+ + ++ + I I+Q+ I RS T T ++ +R LF+ + + GY Sbjct: 64 LLPHYEQPKVDRISNLPVSIIINQNKITGNARSTVGTITDIYASLRLLFSRIAKPFI-GY 122 Query: 727 TPGRFSFNVRGGRCEACQGDGVIK 750 + SFN G C C+G GVIK Sbjct: 123 SMNY-SFNSPEGMCPKCKGLGVIK 145 Score = 75.4 bits (184), Expect = 1e-11, Method: Composition-based stats. Identities = 34/154 (22%), Positives = 61/154 (39%), Gaps = 41/154 (26%) Query: 5 EVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQF 64 E++ +N+KNI++ IP++ VVTG++GSGKSSL Sbjct: 453 ELQNVSLNNIKNISIKIPKNAFTVVTGVAGSGKSSL------------------------ 488 Query: 65 LSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARV--------- 115 + + K S A+ ++Q + RS + + + D ++ LF++V Sbjct: 489 IRHLFKNKF------SDAMILDQSPVHSSSRSNILSYLGVFDTIKTLFSKVSSKNISHFS 542 Query: 116 --GEPRCPDHDVPLAAQTVSQMVDNVLSQPEGKR 147 G+ CP + + + EG R Sbjct: 543 YNGKGACPVCKGKGYIKLDLAFLGDTKQLCEGCR 576 >UniRef50_B2UL01 Excinuclease ABC, A subunit n=1 Tax=Akkermansia muciniphila ATCC BAA-835 RepID=B2UL01_AKKM8 Length = 833 Score = 599 bits (1545), Expect = e-169, Method: Composition-based stats. Identities = 258/548 (47%), Positives = 360/548 (65%), Gaps = 17/548 (3%) Query: 402 SNRPCASCEGTRLRREARHVYV----ENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAE 457 N PC +C G RL A V + L ++ + + LK A Sbjct: 291 ENGPCRACGGQRLSPLALAVTMPAPDRAYNLAELTALPLEDMAGELERLKTPPSLAAALT 350 Query: 458 KILKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSI 517 +++EI R++FL +GL+YL+L R A TLSGGE QR RLASQ+G GL GV+Y+LDEP+ Sbjct: 351 PLMEEINKRVRFLNELGLSYLSLDRQANTLSGGELQRARLASQLGGGLSGVLYILDEPTA 410 Query: 518 GLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPL 577 GLH D +RLL L LR+ GNTV+VVEHDE + AADH++D+GPG+G +GG ++A+G L Sbjct: 411 GLHPADTDRLLRALRTLRNQGNTVLVVEHDEQILTAADHLVDMGPGSGTNGGRILAQGSL 470 Query: 578 EAIMAVPESLTGQYMSGKRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTC 637 I+ S TG+++SGKR + P P L LTGA +NL +VTL +PVG TC Sbjct: 471 AEILGNSGSPTGEWLSGKRNM--PASGRKTAPAGRLVLTGADKHNLNNVTLNIPVGTLTC 528 Query: 638 ITGVSGSGKSTLINDTLFPIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTP 697 I+G SGSGKSTL+ D L P ++ L+G R +QG EHF++++ IDQSPIG+TP Sbjct: 529 ISGPSGSGKSTLVRDCLIPAVRQDLSGKK----GIPRRVQGTEHFNRLVVIDQSPIGKTP 584 Query: 698 RSNPATYTGVFTPVRELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLP 757 RS PAT TG+ +R L+A +P S+ RGYT RFS N+RGGRCE CQG G+I+V+M+FL Sbjct: 585 RSTPATATGLLQVLRPLYAQLPLSKQRGYTAARFSPNIRGGRCERCQGTGMIEVDMNFLG 644 Query: 758 DIYVPCDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVG 817 ++ +PCD C+G+ YNRETLE+ +KGK+I + L +T++EA EFF ++P A L+++ DVG Sbjct: 645 NVAMPCDACQGQCYNRETLEVTWKGKSIAQALALTVDEAAEFFSSLPRAAAILKSMQDVG 704 Query: 818 LTYIRLGQSATTLSGGEAQRVKLARELSKRGT-------GQTLYILDEPTTGLHFADIQQ 870 L Y+ L + A TLSGGE+QR+K+A EL+K + L+ILDEPT+GLHF ++ Sbjct: 705 LGYLNLNRRADTLSGGESQRIKIAAELAKAPAWKLEEDGKRALFILDEPTSGLHFNEVAL 764 Query: 871 LLDVLHKLRDQGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEAS 930 LL L +LRD G+TI+ +EH+ D++ AD++VD+GP G GG I+ G+P VA + Sbjct: 765 LLAALFRLRDAGHTILCVEHHKDLLNAADYLVDMGPGAGRHGGNIVAEGSPADVASNPEA 824 Query: 931 HTARFLKP 938 T+ +L P Sbjct: 825 PTSPWLVP 832 Score = 320 bits (821), Expect = 1e-85, Method: Composition-based stats. Identities = 121/324 (37%), Positives = 184/324 (56%), Gaps = 4/324 (1%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 63 I +RGAR HNL+N+NL +P +KLIV G SGSGKSSLAFDTL++E +RR+++ LSA +RQ Sbjct: 5 ISIRGARQHNLRNLNLDLPSNKLIVFCGPSGSGKSSLAFDTLFSESRRRFLDCLSARSRQ 64 Query: 64 FLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCPDH 123 + EKP+VD I GL PA+ +EQ + + R+ +G+ITEI DYLR+L+A G P P+ Sbjct: 65 GMDQPEKPEVDSITGLPPALCLEQSARQQSSRTLLGSITEILDYLRILYAAAGTPHDPET 124 Query: 124 DVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARIDGEV 183 L ++ ++ + ++S PE RL+L AP + TL + QG++R +GE+ Sbjct: 125 GKELERKSPDRITEELVSLPEHTRLILTAPAENLLAQDPAATLADFQRQGFLRVYWNGEM 184 Query: 184 CDLSDPPKLELQKKHTIEVVVDRFKVR-DDLTQRLAESFETALELSGGTAV-VADMDDPK 241 D+ + + +V+DR VR ++ R+A+S +TAL ++ + + + Sbjct: 185 RDIEEISS-PVPPPPDAALVIDRLIVRGENTASRIADSLQTALRINPDEVRAIITIPGEE 243 Query: 242 AEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGV-QQYFDPDRVIQNPEL 300 A F + P G+ + +L PR FSFN+P GACP+C G G+ +Q P R L Sbjct: 244 ASIRAFHTRYRNPETGFLLPQLTPRHFSFNSPLGACPSCRGTGLNEQENGPCRACGGQRL 303 Query: 301 SLAGGAIRGWDRRNFYYFQMLKSL 324 S A+ Y L +L Sbjct: 304 SPLALAVTMPAPDRAYNLAELTAL 327 Score = 180 bits (456), Expect = 3e-43, Method: Composition-based stats. Identities = 79/229 (34%), Positives = 120/229 (52%), Gaps = 26/229 (11%) Query: 726 YTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIK----YK 781 TP FSFN G C +C+G G+ + E PC C G+R + L + + Sbjct: 265 LTPRHFSFNSPLGACPSCRGTGLNEQENG-------PCRACGGQRLSPLALAVTMPAPDR 317 Query: 782 GKTIHEVLDMTIEE--------------AREFFDAVPALARKLQTLMDVGLTYIRLGQSA 827 + E+ + +E+ A + + ++++ L ++GL+Y+ L + A Sbjct: 318 AYNLAELTALPLEDMAGELERLKTPPSLAAALTPLMEEINKRVRFLNELGLSYLSLDRQA 377 Query: 828 TTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVV 887 TLSGGE QR +LA +L +G LYILDEPT GLH AD +LL L LR+QGNT++V Sbjct: 378 NTLSGGELQRARLASQLGGGLSG-VLYILDEPTAGLHPADTDRLLRALRTLRNQGNTVLV 436 Query: 888 IEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFL 936 +EH+ ++ AD +VD+GP G+ GG IL G+ + S T +L Sbjct: 437 VEHDEQILTAADHLVDMGPGSGTNGGRILAQGSLAEILGNSGSPTGEWL 485 Score = 172 bits (436), Expect = 6e-41, Method: Composition-based stats. Identities = 71/200 (35%), Positives = 111/200 (55%), Gaps = 22/200 (11%) Query: 404 RPCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEI 463 PC +C+G RE V + + +++ A EFF++L A Sbjct: 648 MPCDACQGQCYNRETLEVTWKGKSIAQALALTVDEAAEFFSSLPRAA------------- 694 Query: 464 GDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGL--------VGVMYVLDEP 515 LK + +VGL YL L+R A+TLSGGE+QRI++A+++ +++LDEP Sbjct: 695 -AILKSMQDVGLGYLNLNRRADTLSGGESQRIKIAAELAKAPAWKLEEDGKRALFILDEP 753 Query: 516 SIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEG 575 + GLH + LL L LRD G+T++ VEH +D + AAD+++D+GPGAG HGG +VAEG Sbjct: 754 TSGLHFNEVALLLAALFRLRDAGHTILCVEHHKDLLNAADYLVDMGPGAGRHGGNIVAEG 813 Query: 576 PLEAIMAVPESLTGQYMSGK 595 + + PE+ T ++ + Sbjct: 814 SPADVASNPEAPTSPWLVPR 833 Score = 89.2 bits (220), Expect = 6e-16, Method: Composition-based stats. Identities = 36/114 (31%), Positives = 52/114 (45%), Gaps = 12/114 (10%) Query: 3 KIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYAR 62 ++ + GA HNL N+ L IP L ++G SGSGKS+L D L + A + Sbjct: 503 RLVLTGADKHNLNNVTLNIPVGTLTCISGPSGSGKSTLVRDCL-----------IPAVRQ 551 Query: 63 QFLSLMEKP-DVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARV 115 P V E + + I+Q PRST T T + LR L+A++ Sbjct: 552 DLSGKKGIPRRVQGTEHFNRLVVIDQSPIGKTPRSTPATATGLLQVLRPLYAQL 605 Score = 71.9 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 33/115 (28%), Positives = 53/115 (46%), Gaps = 12/115 (10%) Query: 613 LKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQL---------N 663 + + GAR +NL+++ L LP G SGSGKS+L DTLF ++R+ Sbjct: 5 ISIRGARQHNLRNLNLDLPSNKLIVFCGPSGSGKSSLAFDTLFSESRRRFLDCLSARSRQ 64 Query: 664 GATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGV 718 G E I GL + ++QS ++ R+ + T + +R L+A Sbjct: 65 GMDQPEKPEVDSITGLPP---ALCLEQSARQQSSRTLLGSITEILDYLRILYAAA 116 >UniRef50_C7FPB9 Excinuclease ATPase subunit n=1 Tax=uncultured bacterium HF186_75m_14K15 RepID=C7FPB9_9BACT Length = 798 Score = 596 bits (1536), Expect = e-168, Method: Composition-based stats. Identities = 263/580 (45%), Positives = 360/580 (62%), Gaps = 12/580 (2%) Query: 357 EFKYMNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGTRLRR 416 +F T++ P G +E ++ E PC +C+G RL Sbjct: 224 QFDPRAFSPHTTLGACPTCGGAGVLEEALLASDKGKDTE-----RRYVPCPACDGERLGP 278 Query: 417 EARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNVGLN 476 R V LP M+ +E + L+L + A +AE + I +R +FLV+VGL+ Sbjct: 279 LGRRVRFGGRRLPEYLKMTPPELIEALSGLELDARGALVAEGPVTAIIERARFLVDVGLD 338 Query: 477 YLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRD 536 YL+L RS +LSGGEAQRIRLA+Q+GA L GV+YVLDEP+IGLH D E LL L L+ Sbjct: 339 YLSLDRSVRSLSGGEAQRIRLAAQLGAHLSGVLYVLDEPTIGLHPTDTEVLLKALDRLQG 398 Query: 537 LGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKR 596 GN V++VEHDE +R AD ++DIGPGAG GGE++ PL+ + P SLTG + +R Sbjct: 399 RGNGVLMVEHDEATLRTADVLVDIGPGAGSEGGELLVAAPLDEALRHPRSLTGACLRRER 458 Query: 597 KIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFP 656 V + P + ++LTG NL V LTLP G + +TGVSGSGKS+L++D L Sbjct: 459 P-PVAEAPRPLDDVTFIRLTGVTHRNLSGVDLTLPRGRLSVVTGVSGSGKSSLVHDVLAK 517 Query: 657 IAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFA 716 + + +GL+ +VI +D PIG+ PRS PATY GV+ +R+LFA Sbjct: 518 AIEPHRGA------GSWEHAEGLDGLTRVIRVDDKPIGKNPRSIPATYIGVWDAIRKLFA 571 Query: 717 GVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETL 776 +P +R RG++P RFSFNV+GGRCEAC G G +K+EM FLPD Y PCD C GKR+N +TL Sbjct: 572 RLPNARLRGFSPSRFSFNVKGGRCEACAGQGQVKLEMSFLPDAYSPCDTCGGKRFNTQTL 631 Query: 777 EIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQ 836 ++ Y G +IH+VL+M + +A F+ VP + R L+ L DVGL Y++LGQ +TTLSGGEAQ Sbjct: 632 QVTYDGHSIHDVLEMPVRDALALFERVPKIQRALKLLEDVGLGYLKLGQPSTTLSGGEAQ 691 Query: 837 RVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIK 896 R+KL L R TL +LDEP+ GLH AD+ +LL V+H+L D G T+VVIEHN+DV++ Sbjct: 692 RIKLVSHLIGRKRPDTLIVLDEPSIGLHMADVPKLLAVVHRLVDAGTTVVVIEHNVDVVR 751 Query: 897 TADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFL 936 ADW++DLGP GG GG ++ G E +A+ S T ++L Sbjct: 752 EADWVIDLGPGGGPEGGRVMYQGPFEGLADAPDSRTGQWL 791 Score = 231 bits (589), Expect = 1e-58, Method: Composition-based stats. Identities = 84/257 (32%), Positives = 131/257 (50%), Gaps = 7/257 (2%) Query: 32 LSGSGKSSLAFDTLYAEGQRRYVESLSAYARQFLSLMEKPDVDHIEGLSPAISIEQKSTS 91 +SGSGKS+LAFD ++AEGQRR+++ +S YARQ+++ + +PD I G+ P ++IEQ++T Sbjct: 1 MSGSGKSTLAFDIVFAEGQRRFLDCVSPYARQYITQLGRPDAARIAGIPPTVAIEQRTTR 60 Query: 92 HNPRSTVGTITEIHDYLRLLFARVGEPRCPDHDVPLAAQTVSQMVDNVLSQPEGKRLMLL 151 RS V TEI +LRLLFAR+G D ++ ++ + + L + Sbjct: 61 GGARSVVANATEISAFLRLLFARLGV----DQLAASRRRSPEELALYLEEAYPERELAIC 116 Query: 152 APIIKERKGEHTKTLENLASQGYIRARIDGEVCDLSDPPKLELQKKHTIEVVVDRFKVRD 211 AP I RKG H A G+ +DG + + P+L + H+I+++ R Sbjct: 117 APAISARKGFHKPVFRRAAMMGHTEILVDGVIMPPAPTPRLRRSRLHSIDMIFGR--TMS 174 Query: 212 DLTQRLAESFETALELSGGTAVVADMDDPKAEELLFSANFACPICGYSMRELEPRLFSFN 271 D +R + E A + GG V + E+L ++ +PR FS + Sbjct: 175 DDRERAEDMIERASAMGGGRVRVL-LGQGSVPEVLGPFEVVPLESHVRRQQFDPRAFSPH 233 Query: 272 NPAGACPTCDGLGVQQY 288 GACPTC G GV + Sbjct: 234 TTLGACPTCGGAGVLEE 250 Score = 171 bits (433), Expect = 1e-40, Method: Composition-based stats. Identities = 84/239 (35%), Positives = 124/239 (51%), Gaps = 23/239 (9%) Query: 720 ESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDI-------YVPCDQCKGKRYN 772 R + + P FS + G C C G GV++ E D YVPC C G+R Sbjct: 219 HVRRQQFDPRAFSPHTTLGACPTCGGAGVLE-EALLASDKGKDTERRYVPCPACDGERLG 277 Query: 773 RETLEIKYKGKTIHEVLDMTIEEAREFFDA--------------VPALARKLQTLMDVGL 818 +++ G+ + E L MT E E V A+ + + L+DVGL Sbjct: 278 PLGRRVRFGGRRLPEYLKMTPPELIEALSGLELDARGALVAEGPVTAIIERARFLVDVGL 337 Query: 819 TYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKL 878 Y+ L +S +LSGGEAQR++LA +L +G LY+LDEPT GLH D + LL L +L Sbjct: 338 DYLSLDRSVRSLSGGEAQRIRLAAQLGAHLSG-VLYVLDEPTIGLHPTDTEVLLKALDRL 396 Query: 879 RDQGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLK 937 + +GN ++++EH+ ++TAD +VD+GP GS GGE+LV+ + S T L+ Sbjct: 397 QGRGNGVLMVEHDEATLRTADVLVDIGPGAGSEGGELLVAAPLDEALRHPRSLTGACLR 455 Score = 91.1 bits (225), Expect = 2e-16, Method: Composition-based stats. Identities = 39/114 (34%), Positives = 54/114 (47%), Gaps = 16/114 (14%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYA--EGQRRYVESLSAYA 61 I + G NL ++L +PR +L VVTG+SGSGKSSL D L E R Sbjct: 474 IRLTGVTHRNLSGVDLTLPRGRLSVVTGVSGSGKSSLVHDVLAKAIEPHR---------- 523 Query: 62 RQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARV 115 + ++GL+ I ++ K NPRS T + D +R LFAR+ Sbjct: 524 ----GAGSWEHAEGLDGLTRVIRVDDKPIGKNPRSIPATYIGVWDAIRKLFARL 573 Score = 44.9 bits (105), Expect = 0.013, Method: Composition-based stats. Identities = 24/84 (28%), Positives = 33/84 (39%), Gaps = 6/84 (7%) Query: 641 VSGSGKSTLINDTLFPIAQRQLNGATIAEPAPYRDIQG------LEHFDKVIDIDQSPIG 694 +SGSGKSTL D +F QR+ Y G + + I+Q Sbjct: 1 MSGSGKSTLAFDIVFAEGQRRFLDCVSPYARQYITQLGRPDAARIAGIPPTVAIEQRTTR 60 Query: 695 RTPRSNPATYTGVFTPVRELFAGV 718 RS A T + +R LFA + Sbjct: 61 GGARSVVANATEISAFLRLLFARL 84 >UniRef50_C8NMU6 Excinuclease ABC, A subunit n=91 Tax=Bacteria RepID=C8NMU6_COREF Length = 779 Score = 585 bits (1509), Expect = e-165, Method: Composition-based stats. Identities = 240/761 (31%), Positives = 370/761 (48%), Gaps = 102/761 (13%) Query: 217 LAESFETALELSG------GTAVVADMDDPKAEELLFSANFACPICGYSMRELEPRLFSF 270 L E TA+ + + V D A + + A P G P +SF Sbjct: 81 LLEGLTTAIVVGQESMGANPRSTVGTATDATAMLRILFSRLAEPAAG------GPGAYSF 134 Query: 271 NNP-----------------------AGACPTCDGLGVQQYFDPDRVIQNPELSLAGGAI 307 N P G CP C+G+G D +++ + LSL GA+ Sbjct: 135 NVPSISASGGVSRAGGKREKVEFTRTGGMCPRCEGMGRVSEIDRAQLV-DESLSLNDGAL 193 Query: 308 RGWDRRNFYYFQMLKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKENIEFKYMNDRGDT 367 + ++ A+ + + P + LY I+F +N Sbjct: 194 LIPGYKV--GSWSMRGYAESGLYPADIPVAEFTDEQRHA-LYHQEPMKIKFNGIN----- 245 Query: 368 SIRRHPFEGVLHNMERRYKETESSAVREELAKFI----SNRPCASCEGTRLRREARHVYV 423 +EG++ + + + S +++ + +F+ + C C GTRL R A + Sbjct: 246 ----VTYEGLIPKITKSMLSKDRSGMQKHIGEFVDRAVTFIACPDCGGTRLARHALESRI 301 Query: 424 ENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTLSRS 483 + + M + + + + A+ +++ + L+ V +GL YL L R Sbjct: 302 NGKNIADLCSMEVRDLARWIDGVD-----ARSVAPLMRGLSQTLENFVAIGLGYLQLDRP 356 Query: 484 AETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIV 543 TLSGGEAQR R+ +G+ L V YV DEP+ GLH D ERL L+ LRD GNTV+V Sbjct: 357 VATLSGGEAQRTRMVRHLGSPLTDVTYVFDEPTAGLHAHDIERLNRLLLDLRDKGNTVLV 416 Query: 544 VEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEVPKK 603 VEH + I ADHV+D+GPGAG GGE+ EG + + +++TG++ + +++ + Sbjct: 417 VEHKPETIAIADHVVDLGPGAGGAGGEIQFEGTVAE-LEASDTVTGRHFHDRAELKTSAR 475 Query: 604 RVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLN 663 + L + GA NNL+DV + +P+G+ T I+GV+GSGKS+L++ Sbjct: 476 SAAGH----LPIRGANRNNLRDVDVDIPLGVLTVISGVAGSGKSSLVHAI---------- 521 Query: 664 GATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESRA 723 + ++ +DQ+ I + RSNPATYTG+ +R+ FA + Sbjct: 522 ----------------PRDESLVSVDQTSIQGSTRSNPATYTGMLDSIRKAFA-----KV 560 Query: 724 RGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKYKGK 783 G P FS N GG C C G GV+ V++ + + PC+ C+G+R++ L+ G+ Sbjct: 561 NGVKPALFSANS-GGACPNCHGTGVVTVDLGMVAGVSSPCEVCEGRRFDEAVLDHHLGGR 619 Query: 784 TIHEVLDMTIEEAREFFDA----VPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVK 839 I EVL M EA EFF A +PA L+ L+ VGL Y+ LGQ +TLSGGE QR+K Sbjct: 620 NIAEVLAMPAVEALEFFSAPESKMPAAVTILRRLVAVGLGYLTLGQPLSTLSGGERQRLK 679 Query: 840 LARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTAD 899 L L+ + T +ILDEPTTGLH AD++ LL + L D G T++V+EH+L V+ AD Sbjct: 680 LGTHLADKATT---FILDEPTTGLHLADVRTLLSLFDSLVDAGKTVIVVEHHLAVLAHAD 736 Query: 900 WIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLKPML 940 I+++GP GS GG+I+ GTP + + T +LK L Sbjct: 737 HIIEVGPGAGSDGGQIVFEGTPAEL-TGSGTLTGGYLKNYL 776 Score = 173 bits (438), Expect = 4e-41, Method: Composition-based stats. Identities = 61/117 (52%), Positives = 82/117 (70%) Query: 2 DKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYA 61 D I V GA +NLKNI+L IP+ ++ V TG+SGSGKSSL F T+ AE QR E+ SA+ Sbjct: 8 DMIRVHGAHENNLKNISLAIPKRRVTVFTGVSGSGKSSLVFGTIAAESQRLINETYSAFV 67 Query: 62 RQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEP 118 + F+ + +PDVD +EGL+ AI + Q+S NPRSTVGT T+ LR+LF+R+ EP Sbjct: 68 QGFMPVAARPDVDLLEGLTTAIVVGQESMGANPRSTVGTATDATAMLRILFSRLAEP 124 Score = 106 bits (264), Expect = 6e-21, Method: Composition-based stats. Identities = 55/173 (31%), Positives = 78/173 (45%), Gaps = 31/173 (17%) Query: 607 ANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGAT 666 A+ ++++ GA NNLK+++L +P T TGVSGSGKS+L+ T+ +QR +N Sbjct: 4 ADSHDMIRVHGAHENNLKNISLAIPKRRVTVFTGVSGSGKSSLVFGTIAAESQRLINETY 63 Query: 667 IA------EPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPE 720 A A D+ LE I + Q +G PRS T T +R LF+ + E Sbjct: 64 SAFVQGFMPVAARPDVDLLEGLTTAIVVGQESMGANPRSTVGTATDATAMLRILFSRLAE 123 Query: 721 SRARGYTPGRFSFNVR-----------------------GGRCEACQGDGVIK 750 A G PG +SFNV GG C C+G G + Sbjct: 124 PAAGG--PGAYSFNVPSISASGGVSRAGGKREKVEFTRTGGMCPRCEGMGRVS 174 Score = 78.4 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 38/157 (24%), Positives = 59/157 (37%), Gaps = 46/157 (29%) Query: 6 VRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQFL 65 +RGA +NL+++++ IP L V++G++GSGKSSL E Sbjct: 483 IRGANRNNLRDVDVDIPLGVLTVISGVAGSGKSSLVHAIPRDESL--------------- 527 Query: 66 SLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPR------ 119 +S++Q S + RS T T + D +R FA+V + Sbjct: 528 -----------------VSVDQTSIQGSTRSNPATYTGMLDSIRKAFAKVNGVKPALFSA 570 Query: 120 -----CPDHDVPLAAQTVSQMVDNV---LSQPEGKRL 148 CP+ MV V EG+R Sbjct: 571 NSGGACPNCHGTGVVTVDLGMVAGVSSPCEVCEGRRF 607 >UniRef50_UPI0001BC2CF0 putative excinuclease ABC subunit A n=1 Tax=Brevibacterium linens BL2 RepID=UPI0001BC2CF0 Length = 849 Score = 585 bits (1508), Expect = e-165, Method: Composition-based stats. Identities = 239/725 (32%), Positives = 364/725 (50%), Gaps = 41/725 (5%) Query: 244 ELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPELSLA 303 +LFS P L FS N GACPTC G D D + + L++ Sbjct: 112 RVLFSRFGDYPANQ---GRLLASAFSPNTVEGACPTCAAKGRIHEIDLDAAVPDDSLTIR 168 Query: 304 GGAIRGWDRRNFYYFQMLKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKENIEFKYMND 363 GAI W + + K L + D++ W +L A +L ++ + Sbjct: 169 EGAIAAWPGG--WLGRNFKHLVETMGIDIDVAWKTLPAETRTWLLTTEDTPSVTVEPEKI 226 Query: 364 RGD-TSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGTRLRREARHVY 422 F + T S+ +RE +F+SN C C G+R+ A V Sbjct: 227 LDHVAREYTGKFRSARRYLLDTMVTTSSATIRERTEEFLSNDLCPDCHGSRINPAALAVT 286 Query: 423 VENTPLPAISDMSIGHAMEFFN-------------NLKLAGQRAKIAEKILKEIGDRLKF 469 + + + D S+ N + + + + A +L E+ R Sbjct: 287 IGGANIAEVGDHSLTDLAVTINAAIAADLERGPSESKRFSAATDEAAHVLLDELDKRTDV 346 Query: 470 LVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLG 529 + +G+ YL RSA TLS GE QR+RLA+ + +GL G++YV DE S GLH +D + L Sbjct: 347 IERLGVGYLPPKRSAATLSPGELQRLRLAAHLHSGLHGMVYVFDELSTGLHPKDTDHLFT 406 Query: 530 TLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTG 589 + LRD GNTVI+VEHD + +R D VI++GPG G GG+++ GP+ + ES T Sbjct: 407 HIEALRDAGNTVILVEHDMEIVRRCDWVIELGPGGGARGGQLMFSGPVAEALD-GESSTA 465 Query: 590 QYMSGKRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTL 649 + + + R P E + T NNL+ + L+ P+G T +TGVSG+GKS++ Sbjct: 466 VRL--RNEAPSEPWRAPQEFEDWARCTSLSANNLRGLALSFPIGGLTTLTGVSGAGKSSV 523 Query: 650 INDTLFPIAQRQLNGATIAEPAPYR-----------------DIQGLEHFDKVIDIDQSP 692 + +A+ E P D GLE FD+V+ DQS Sbjct: 524 LRSV-ATLARSAGASPFDGEEEPSTISRRSGSGGEGGDLAEADAAGLEVFDRVVSFDQST 582 Query: 693 IGRTPRSNPATYTGVFTPVRELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVE 752 IGR+PRS TY G+F +R LFA +R+RG+T +FSFN GRC C+G G+I ++ Sbjct: 583 IGRSPRSVIGTYLGIFDKIRSLFAKTDLARSRGFTASQFSFNTARGRCPRCEGLGIITID 642 Query: 753 MHFLPDIYVPCDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQT 812 + LP C +C+G+R+ ETLE+ + TI +VLD++I+ A F L + Sbjct: 643 LVHLPASSGTCPECEGRRFIEETLEVTVEELTIADVLDLSIDAAATVFAERLGLVAHFEV 702 Query: 813 LMDVGLTYIRLGQSATTLSGGEAQRVKLAREL-SKRGTGQTLYILDEPTTGLHFADIQQL 871 L VGL + LGQS+ TLSGGEAQR++LA + +++ ++L+ILDEP GLH +D + L Sbjct: 703 LQRVGLGGLLLGQSSATLSGGEAQRLRLAAVMRARKRRERSLFILDEPANGLHPSDARVL 762 Query: 872 LDVLHKLRDQGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEASH 931 + ++ D+G+TI++ +HN+++ +DW++D+GP G GG+I+ +GTP VA Sbjct: 763 GQLFRQIVDEGDTILIADHNMELAAGSDWLIDMGPGPGPDGGQIVAAGTPLQVATAGVGA 822 Query: 932 TARFL 936 TA L Sbjct: 823 TAEVL 827 Score = 163 bits (414), Expect = 2e-38, Method: Composition-based stats. Identities = 55/116 (47%), Positives = 82/116 (70%) Query: 2 DKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYA 61 ++I + GAR HNL ++ +P +LI + G+SGSGKSSLAFDT+YAE QRRY+ES+S + Sbjct: 5 EQIGIVGAREHNLSGFSVSLPHRQLIGICGVSGSGKSSLAFDTIYAEAQRRYLESVSPFT 64 Query: 62 RQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGE 117 R L + P VD I GL AI+++Q ++ S+VGT++++ D LR+LF+R G+ Sbjct: 65 RHLLGAVSAPQVDRITGLPAAIAVKQLVSTPPENSSVGTLSQVSDLLRVLFSRFGD 120 Score = 113 bits (284), Expect = 3e-23, Method: Composition-based stats. Identities = 67/272 (24%), Positives = 108/272 (39%), Gaps = 43/272 (15%) Query: 353 KENIEFKYMNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELA--------KFI--- 401 + F + G+ + + +T+ + R A + Sbjct: 573 DRVVSFDQSTIGRSPRSVIGTYLGIFDKIRSLFAKTDLARSRGFTASQFSFNTARGRCPR 632 Query: 402 ----------------SNRPCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNN 445 S+ C CEG R E V VE + + D+SI A F Sbjct: 633 CEGLGIITIDLVHLPASSGTCPECEGRRFIEETLEVTVEELTIADVLDLSIDAAATVFAE 692 Query: 446 LKLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGL 505 + + L VGL L L +S+ TLSGGEAQR+RLA+ + A Sbjct: 693 --------------RLGLVAHFEVLQRVGLGGLLLGQSSATLSGGEAQRLRLAAVMRARK 738 Query: 506 VGV--MYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPG 563 +++LDEP+ GLH D L + D G+T+++ +H+ + +D +ID+GPG Sbjct: 739 RRERSLFILDEPANGLHPSDARVLGQLFRQIVDEGDTILIADHNMELAAGSDWLIDMGPG 798 Query: 564 AGVHGGEVVAEGPLEAIMAVPESLTGQYMSGK 595 G GG++VA G + T + +S + Sbjct: 799 PGPDGGQIVAAGTPLQVATAGVGATAEVLSAR 830 Score = 90.0 bits (222), Expect = 4e-16, Method: Composition-based stats. Identities = 40/146 (27%), Positives = 60/146 (41%), Gaps = 8/146 (5%) Query: 613 LKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAEPAP 672 + + GAR +NL +++LP I GVSGSGKS+L DT++ AQR+ + Sbjct: 7 IGIVGAREHNLSGFSVSLPHRQLIGICGVSGSGKSSLAFDTIYAEAQRRYLESVSPFTRH 66 Query: 673 YRDIQGLEHFDKVI----DIDQSPIGRTP--RSNPATYTGVFTPVRELFAGVPE--SRAR 724 D++ I + TP S+ T + V +R LF+ + + Sbjct: 67 LLGAVSAPQVDRITGLPAAIAVKQLVSTPPENSSVGTLSQVSDLLRVLFSRFGDYPANQG 126 Query: 725 GYTPGRFSFNVRGGRCEACQGDGVIK 750 FS N G C C G I Sbjct: 127 RLLASAFSPNTVEGACPTCAAKGRIH 152 Score = 66.5 bits (161), Expect = 5e-09, Method: Composition-based stats. Identities = 32/122 (26%), Positives = 51/122 (41%), Gaps = 26/122 (21%) Query: 12 HNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQFLSL---- 67 +NL+ + L P L +TG+SG+GKSS ++ + SA A F Sbjct: 495 NNLRGLALSFPIGGLTTLTGVSGAGKSS-VLRSVATLAR-------SAGASPFDGEEEPS 546 Query: 68 --------------MEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFA 113 + + D +E +S +Q + +PRS +GT I D +R LFA Sbjct: 547 TISRRSGSGGEGGDLAEADAAGLEVFDRVVSFDQSTIGRSPRSVIGTYLGIFDKIRSLFA 606 Query: 114 RV 115 + Sbjct: 607 KT 608 >UniRef50_B4CXL9 ABC transporter-related protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CXL9_9BACT Length = 755 Score = 582 bits (1500), Expect = e-164, Method: Composition-based stats. Identities = 233/740 (31%), Positives = 366/740 (49%), Gaps = 79/740 (10%) Query: 202 VVVDRFKVRDDLTQRLAESFETALELSGGTAVVADMDDPKAEELLFSANFACPICGYSMR 261 VV+D+ + + + S E A L A A P+ Sbjct: 88 VVIDQADLGRNPRSTIGTSTE-AYTF----------------LRLLFARAAVPV------ 124 Query: 262 ELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPELSLAGGAIR--GWDRRNFYYFQ 319 L+ FSFN+P GACP C GLG DP+R+ + SL GAIR W Y+ Sbjct: 125 -LDASAFSFNSPEGACPACRGLGQILTPDPERLF-DLSKSLGEGAIRHRAWKVGG-RYWN 181 Query: 320 MLKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKENIEFKYMNDRGDTSIRRHPFEGVLH 379 ++K+ F+++AP G +++ + E + +R ++R FEGV+ Sbjct: 182 IIKA---TEFFEMDAPLGQWPKEKLDHLMHAAPAE------VANRVPGFVQRFTFEGVVE 232 Query: 380 NMERRYKETESSAVREELAKFISNRPCASCEGTRLRREARHVYVENTPLPAISDMSIGHA 439 + R + + A+F + + CA+C GTRL++ A + + + +++ Sbjct: 233 RLRERLADDRGLDSADYDAQFFTTQWCATCGGTRLQQRALACRLNGLNIADAAGLAVPEL 292 Query: 440 MEFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLAS 499 F +L+++ ++ + L+ L V L+YLTL R T+SGGE QRI++A Sbjct: 293 KNFVRSLEMS-----TLATVVDSLSRILENLEMVELSYLTLDRPITTVSGGEMQRIKIAR 347 Query: 500 QIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVID 559 ++G+ L+G++Y+LDEPS GLH ++ E + + L++ GNT++ VEH+ + AD++++ Sbjct: 348 ELGSRLMGILYILDEPSRGLHAKNVEAVNSIITKLKERGNTILSVEHNRAVVELADNIVE 407 Query: 560 IGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEVPKKRVPANPEKVLKLTGAR 619 +GPGAG GG++ G TG+ +S ++ P P + + R Sbjct: 408 LGPGAGSRGGQITETGTPADF-KNSSGPTGRLLSAAKQHISPPP--PKAFTEWHFFSDLR 464 Query: 620 GNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAEPAPYRDIQGL 679 NNLK L +P TC+ GVSG+GKS+L+ + + +PA Sbjct: 465 RNNLKIEKLKIPRAALTCLVGVSGAGKSSLLEEM------------QLRDPAS------- 505 Query: 680 EHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESRARGYTPGRFSFNVRGGR 739 + + Q IG + RSN TY F +R LFA + + F+FN G Sbjct: 506 ------VRVAQRQIGASVRSNVCTYLNFFDEIRNLFAKKANA-----SASLFAFNSDGA- 553 Query: 740 CEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREF 799 C C G G I +++HFL PC C GKRY E L ++ + I EVL++ +EEA F Sbjct: 554 CPECGGRGSITLDLHFLGSAMAPCRTCNGKRYRAEVLGYTWQDRNISEVLELPVEEAATF 613 Query: 800 FDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEP 859 F + L+ L+ GL YIRLGQS T SGGE QRVKL L LY+LDEP Sbjct: 614 FREGKKIRSALELLLGCGLGYIRLGQSLDTFSGGELQRVKLIYGL---NDPTALYLLDEP 670 Query: 860 TTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSG 919 + GLH DI++++ +L L +G T+V EH+LD++ ADW+V+LGP + GG+++ +G Sbjct: 671 SRGLHPDDIERIVSLLRTLTARGKTVVASEHSLDLVARADWVVELGPGAANAGGKVIAAG 730 Query: 920 TPETVAECEASHTARFLKPM 939 T + S TA++LK Sbjct: 731 TVREIIRATTSITAQYLKSY 750 Score = 166 bits (420), Expect = 5e-39, Method: Composition-based stats. Identities = 63/161 (39%), Positives = 85/161 (52%), Gaps = 16/161 (9%) Query: 2 DKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYA 61 D++ V G R HNLK++++ IP + V TG+SG GKSSL FD +YA + ++SLS YA Sbjct: 7 DQLSVTGVRLHNLKSVSVSIPHFRHTVCTGVSGCGKSSLVFDCIYALCEYELLQSLSTYA 66 Query: 62 RQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPR-- 119 R + L PDV+H GL P + I+Q NPRST+GT TE + +LRLLFAR P Sbjct: 67 RGAIPLPVVPDVEHASGLLPPVVIDQADLGRNPRSTIGTSTEAYTFLRLLFARAAVPVLD 126 Query: 120 ------------CPDHD--VPLAAQTVSQMVDNVLSQPEGK 146 CP + ++ D S EG Sbjct: 127 ASAFSFNSPEGACPACRGLGQILTPDPERLFDLSKSLGEGA 167 Score = 118 bits (295), Expect = 1e-24, Method: Composition-based stats. Identities = 52/152 (34%), Positives = 77/152 (50%), Gaps = 11/152 (7%) Query: 604 RVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLN 663 R P+ + L +TG R +NLK V++++P T TGVSG GKS+L+ D ++ + + +L Sbjct: 2 RPPSTDQ--LSVTGVRLHNLKSVSVSIPHFRHTVCTGVSGCGKSSLVFDCIYALCEYELL 59 Query: 664 GATIAEPA---PYRDIQGLEHFDKV---IDIDQSPIGRTPRSNPATYTGVFTPVRELFAG 717 + P + +EH + + IDQ+ +GR PRS T T +T +R LFA Sbjct: 60 QSLSTYARGAIPLPVVPDVEHASGLLPPVVIDQADLGRNPRSTIGTSTEAYTFLRLLFAR 119 Query: 718 VPESRARGYTPGRFSFNVRGGRCEACQGDGVI 749 FSFN G C AC+G G I Sbjct: 120 AAVPV---LDASAFSFNSPEGACPACRGLGQI 148 Score = 65.0 bits (157), Expect = 1e-08, Method: Composition-based stats. Identities = 32/128 (25%), Positives = 45/128 (35%), Gaps = 42/128 (32%) Query: 10 RTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQFLSLME 69 R +NLK L IPR L + G+SG+GKSSL L M+ Sbjct: 464 RRNNLKIEKLKIPRAALTCLVGVSGAGKSSL------------------------LEEMQ 499 Query: 70 KPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPR---------- 119 D ++ + Q+ + RS V T D +R LFA+ Sbjct: 500 LRD-------PASVRVAQRQIGASVRSNVCTYLNFFDEIRNLFAKKANASASLFAFNSDG 552 Query: 120 -CPDHDVP 126 CP+ Sbjct: 553 ACPECGGR 560 >UniRef50_Q6A9D4 UvrA-like ABC transporter n=2 Tax=Propionibacterium acnes RepID=Q6A9D4_PROAC Length = 779 Score = 566 bits (1458), Expect = e-159, Method: Composition-based stats. Identities = 237/719 (32%), Positives = 365/719 (50%), Gaps = 67/719 (9%) Query: 231 TAVVADMDDPKAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFD 290 + V+ L + P GYS +S N+P G C C GLG D Sbjct: 107 RSSVSTASGIAPYLRLLFSRSGSPSAGYSPS------YSPNDPRGMCMDCSGLGYVDDID 160 Query: 291 PDRVIQNPELSLAGGAIRGWDRRNFYYFQMLKSLADHYKFDVEAPWGSLSANVHKVVLYG 350 +I P+ SL GA+R Y K L FD + PW L K++L+G Sbjct: 161 LQELIA-PDRSLNEGAVRFPSFEPGTYRW--KRLVCSGLFDPDVPWKELPEASRKLLLHG 217 Query: 351 SGKENIEFKYMNDRGDTSIRRHP-FEGVLHNMERRYKETESSAVREE----LAKFISNRP 405 G +R T +H F+G++ ++ Y E ++ E+ L + + Sbjct: 218 QG-------VRLERPLTGYPKHGIFDGIIPRLKASYLEKANAKTTEKEDAALRRIVKRVV 270 Query: 406 CASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGD 465 C C G R+ AR +E + S +SI + F + +I E + + Sbjct: 271 CPHCHGQRINEAARASRIEGLNIAEASHLSIDECIAFIKTIT-----DEITEAPRQAVLA 325 Query: 466 RLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNE 525 RL + ++GL YL+L R +TLSGGEAQR+RL S + A + +V+DEPS GLH D E Sbjct: 326 RLNNMRDIGLGYLSLDRPTDTLSGGEAQRLRLVSLLDAPITDATFVMDEPSSGLHPADIE 385 Query: 526 RLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPE 585 RLL +L LRD GNTVI+VEH+ + A DHV+++GPGAG GG V+ EG + + + Sbjct: 386 RLLRSLRKLRDSGNTVIIVEHNLQVLAACDHVVELGPGAGDDGGRVLFEGSPRS-LTRSD 444 Query: 586 SLTGQYMSGKRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSG 645 + TG+ + I++ ++ PA V+++T AR NNL DV+++ PVG T ++GV+GSG Sbjct: 445 TPTGKALRAG--IQLNRRSRPATD--VIEVTHARCNNLGDVSVSFPVGALTVVSGVAGSG 500 Query: 646 KSTLINDTLFPIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYT 705 KS+L + + +V IDQ P+ + RS+ T Sbjct: 501 KSSLASAL-------------------------AQQHPEVTIIDQLPLAASSRSSILTAL 535 Query: 706 GVFTPVRELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQ 765 G+ +P+RE F S+ G T FS N G C C+G G V+M F+ D+ PC++ Sbjct: 536 GLESPIREAF-----SKISGLTTSWFSAN-EKGACPLCKGRGTTHVDMAFMDDVQTPCER 589 Query: 766 CKGKRYNRETLEIKYK----GKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYI 821 C G+++N T+ ++ TI +VLD + + E + + + L VGL Y+ Sbjct: 590 CGGRKFNETTMAVRLPMGSLNPTIADVLDSGLNQVSELYATQDDVLTVISLLQQVGLGYL 649 Query: 822 RLGQSATTLSGGEAQRVKLARELS-KRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRD 880 LG++ TLSGGE QR+KL + L R +++ +LDE TTGLH D++QL+ L +L + Sbjct: 650 TLGRTLNTLSGGELQRIKLVQFLKEHREEQESVLVLDEITTGLHPKDVEQLIQFLRRLSE 709 Query: 881 QGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLKPM 939 +G T + I+HN +I AD+ +DLGP + GG ++ SGT + +A+C S T ++L + Sbjct: 710 RGATAIAIDHNPGLISQADYNIDLGPGAEAAGGTVVFSGTAQGLADCPESTTGKWLHKL 768 Score = 135 bits (341), Expect = 6e-30, Method: Composition-based stats. Identities = 72/287 (25%), Positives = 108/287 (37%), Gaps = 59/287 (20%) Query: 3 KIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYAR 62 I++ GA+THNL+++ + IP+ L+ V G+SGSGK+SL TL Q+ A+ + Sbjct: 16 SIQIHGAKTHNLRDVTVCIPKHALVGVAGVSGSGKTSLV-STLAVGAQQAVSSLFPAFVQ 74 Query: 63 QFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPR--- 119 L+ +E VD ++GL+ + QK S N RS+V T + I YLRLLF+R G P Sbjct: 75 ARLNTLEPGLVDGLQGLTFTAIVGQKKFSRNARSSVSTASGIAPYLRLLFSRSGSPSAGY 134 Query: 120 ------------CPDHDVP--LAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHT-- 163 C D + + +++ S EG + P + Sbjct: 135 SPSYSPNDPRGMCMDCSGLGYVDDIDLQELIAPDRSLNEGA---VRFPSFEPGTYRWKRL 191 Query: 164 ------------KTLENLASQGYIRARIDGEVCDLSDPPKLELQKKHTIEVVVDRFKVRD 211 K L + + + G+ L P L KH I D Sbjct: 192 VCSGLFDPDVPWKELPEASRK----LLLHGQGVRLERP--LTGYPKHGIF---------D 236 Query: 212 DLTQRLAES-FETALELSGGTAVVADMDDPKAEELLFSANFACPICG 257 + RL S E A + A CP C Sbjct: 237 GIIPRLKASYLEKA--------NAKTTEKEDAALRRIVKRVVCPHCH 275 Score = 92.7 bits (229), Expect = 7e-17, Method: Composition-based stats. Identities = 45/163 (27%), Positives = 77/163 (47%), Gaps = 10/163 (6%) Query: 599 EVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIA 658 + K V + +++ GA+ +NL+DVT+ +P + GVSGSGK++L+ TL A Sbjct: 3 NLRKDIVSRSSVGSIQIHGAKTHNLRDVTVCIPKHALVGVAGVSGSGKTSLV-STLAVGA 61 Query: 659 QRQLNGATIAEPAPYRD------IQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVR 712 Q+ ++ A + + GL+ + Q R RS+ +T +G+ +R Sbjct: 62 QQAVSSLFPAFVQARLNTLEPGLVDGLQGLTFTAIVGQKKFSRNARSSVSTASGIAPYLR 121 Query: 713 ELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVI-KVEMH 754 LF+ A GY+P S N G C C G G + +++ Sbjct: 122 LLFSRSGSPSA-GYSPSY-SPNDPRGMCMDCSGLGYVDDIDLQ 162 Score = 71.9 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 44/190 (23%), Positives = 75/190 (39%), Gaps = 45/190 (23%) Query: 2 DKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYA 61 D IEV AR +NL ++++ P L VV+G++GSGKSSLA SA A Sbjct: 466 DVIEVTHARCNNLGDVSVSFPVGALTVVSGVAGSGKSSLA----------------SALA 509 Query: 62 RQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVG----- 116 +Q P+V I+ L A + RS++ T + +R F+++ Sbjct: 510 QQH------PEVTIIDQLPLA---------ASSRSSILTALGLESPIREAFSKISGLTTS 554 Query: 117 ------EPRCPDHDVPLAAQTVSQMVDNVLSQPE---GKRLMLLAPIIKERKGEHTKTLE 167 + CP +D+V + E G++ ++ G T+ Sbjct: 555 WFSANEKGACPLCKGRGTTHVDMAFMDDVQTPCERCGGRKFNETTMAVRLPMGSLNPTIA 614 Query: 168 NLASQGYIRA 177 ++ G + Sbjct: 615 DVLDSGLNQV 624 >UniRef50_A9U6S5 Predicted protein (Fragment) n=6 Tax=cellular organisms RepID=A9U6S5_PHYPA Length = 804 Score = 565 bits (1456), Expect = e-159, Method: Composition-based stats. Identities = 241/454 (53%), Positives = 322/454 (70%), Gaps = 2/454 (0%) Query: 272 NPAGACPTCDGLGVQQYFDPDRVIQNPELSLAGGAIRGWDRR-NFYYFQMLKSLADHYKF 330 +P GACP CDGLGV+ DP+ +I + E S+ GA W + YY Q LKS+ +HY Sbjct: 352 DPFGACPECDGLGVKMIVDPELLIPDREKSIDDGAFLAWTGSTSNYYPQFLKSVCEHYNI 411 Query: 331 DVEAPWGSLSANVHKVVLYGSGKENIEFKYMNDRGDTSIRRHPFEGVLHNMERRYKETES 390 P L +LYG+G + + F+Y ND G FEGV+ N+ERRY+ET S Sbjct: 412 PQNVPVSQLKEEDMNKLLYGTGNQKVRFRYENDFGQRKEAFVVFEGVIPNLERRYRETAS 471 Query: 391 SAVREELAKFISNRPCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAG 450 +RE + F+S +PC C+G RL++E V V + + ++ +SIG AM+ F+ L+L+ Sbjct: 472 EGIREFIENFMSAKPCEVCKGHRLKKEVLAVTVNDYNMAHVTSLSIGEAMKLFDQLELSE 531 Query: 451 QRAKIAEKILKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMY 510 + IA ILKEI RL FLVNVGL+YLTLSR+A TLSGGEAQRIRLA+QIG+ L+GV+Y Sbjct: 532 KERSIANLILKEINARLGFLVNVGLDYLTLSRAAGTLSGGEAQRIRLATQIGSSLMGVLY 591 Query: 511 VLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGE 570 +LDEPSIGLHQRDN+RL+ TL H+RD+GNT+IVVEHDED + AAD++IDIGPGAG+HGG Sbjct: 592 ILDEPSIGLHQRDNDRLISTLEHMRDIGNTLIVVEHDEDTMMAADYIIDIGPGAGIHGGR 651 Query: 571 VVAEGPLEAIMAVPESLTGQYMSGKRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTL 630 V+A+G E IM P SLTGQY+SG++ I V +R + + L++ GA+ NNLK++ + Sbjct: 652 VIAQGTPEEIMKDPNSLTGQYLSGRKFIPVNTERRKPDN-RWLEIRGAKENNLKNINAKI 710 Query: 631 PVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQ 690 PVG+FT +TGVSGSGKSTL+N+ L+ R+LN A P +++I+GLEH +KVIDIDQ Sbjct: 711 PVGVFTAVTGVSGSGKSTLVNEILYKTLARELNKAVKVRPGQHKEIRGLEHLEKVIDIDQ 770 Query: 691 SPIGRTPRSNPATYTGVFTPVRELFAGVPESRAR 724 SPIGRTPRSNPATYTGVF +R+++A E++ R Sbjct: 771 SPIGRTPRSNPATYTGVFDDIRDIYAQTNEAKIR 804 Score = 188 bits (478), Expect = 8e-46, Method: Composition-based stats. Identities = 72/189 (38%), Positives = 109/189 (57%), Gaps = 15/189 (7%) Query: 762 PCDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAV--------------PALA 807 PC+ CKG R +E L + + V ++I EA + FD + + Sbjct: 486 PCEVCKGHRLKKEVLAVTVNDYNMAHVTSLSIGEAMKLFDQLELSEKERSIANLILKEIN 545 Query: 808 RKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFAD 867 +L L++VGL Y+ L ++A TLSGGEAQR++LA ++ G LYILDEP+ GLH D Sbjct: 546 ARLGFLVNVGLDYLTLSRAAGTLSGGEAQRIRLATQIGSSLMG-VLYILDEPSIGLHQRD 604 Query: 868 IQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAEC 927 +L+ L +RD GNT++V+EH+ D + AD+I+D+GP G GG ++ GTPE + + Sbjct: 605 NDRLISTLEHMRDIGNTLIVVEHDEDTMMAADYIIDIGPGAGIHGGRVIAQGTPEEIMKD 664 Query: 928 EASHTARFL 936 S T ++L Sbjct: 665 PNSLTGQYL 673 Score = 115 bits (287), Expect = 1e-23, Method: Composition-based stats. Identities = 40/116 (34%), Positives = 60/116 (51%), Gaps = 6/116 (5%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 63 +E+RGA+ +NLKNIN IP VTG+SGSGKS+L + LY R +++ Q Sbjct: 693 LEIRGAKENNLKNINAKIPVGVFTAVTGVSGSGKSTLVNEILYKTLARELNKAVKVRPGQ 752 Query: 64 FLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPR 119 ++ +E L I I+Q PRS T T + D +R ++A+ E + Sbjct: 753 H------KEIRGLEHLEKVIDIDQSPIGRTPRSNPATYTGVFDDIRDIYAQTNEAK 802 >UniRef50_UPI00019058DE excinuclease ABC subunit A n=1 Tax=Rhizobium etli Kim 5 RepID=UPI00019058DE Length = 501 Score = 551 bits (1421), Expect = e-155, Method: Composition-based stats. Identities = 234/500 (46%), Positives = 318/500 (63%), Gaps = 24/500 (4%) Query: 1 MDKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAY 60 + I +RGAR HNLK+I+L +PR+KLIV+TGLSGSGKSSLAFDT+YAEGQRRYVESLSAY Sbjct: 4 LKTISIRGAREHNLKSIDLDLPRNKLIVMTGLSGSGKSSLAFDTIYAEGQRRYVESLSAY 63 Query: 61 ARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRC 120 ARQFL +M+KPDVD I+ LSP + P VGT ++ Y L R P Sbjct: 64 ARQFLEMMQKPDVDQIDRLSPGHFDRAEDHLAKPALDVGTSRDLRLYAPALCPR-RRPYS 122 Query: 121 PDHDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARID 180 P +P+ +QTVSQMVD +L+ EG RL +LAP+++ RKGE+ K L L +G+ R ++D Sbjct: 123 PATGLPIESQTVSQMVDRILAFGEGTRLYILAPLVRGRKGEYKKELAELMKKGFQRVKVD 182 Query: 181 GEVCDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVADMDDP 240 G+ ++++ P L+ + KH I+VVVDR VR D++ RLA+S ET L+L+ G AV D P Sbjct: 183 GQFYEIAEAPVLDKKYKHDIDVVVDRIVVRSDVSARLADSLETCLKLADGLAVAEFADKP 242 Query: 241 ------------------KAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDG 282 E +LFS FACP+ G+++ E+EPRLFSFNNP GACPTCDG Sbjct: 243 LPPEETSAGGSANKSLNETHERVLFSEKFACPVSGFTIPEIEPRLFSFNNPFGACPTCDG 302 Query: 283 LGVQQYFDPDRVIQNPELSLAGGAIRGWDRRNF-YYFQMLKSLADHYKFDVEAPWGSLSA 341 LG QQ DPD ++ PE +L GAI W + YY Q L++L HY F + W LSA Sbjct: 303 LGAQQKIDPDLIVPEPERTLRDGAIAPWAKSTSPYYNQTLEALGKHYGFKLGTRWNDLSA 362 Query: 342 NVHKVVLYGSGKENIEFKYMNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFI 401 V+L G+ + IEF Y D + FEG++ N+ERR+KET+S+ RE++ +F+ Sbjct: 363 EAKDVILNGTDDK-IEFHYA-DGARSFTTHKNFEGIITNLERRWKETDSAWAREDIERFM 420 Query: 402 SNRPCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLK--LAGQRAKIAEKI 459 S PC +C G RL+ EA V + + +++MSI A ++F L ++ +IA +I Sbjct: 421 SAAPCPACNGYRLKPEALAVKINRLHIGEVTEMSIRVARDWFETLPASFNAKQNEIAVRI 480 Query: 460 LKEIGDRLKFLVNVGLNYLT 479 LKEI DRL+FL +VGL YL+ Sbjct: 481 LKEIRDRLRFLNDVGLEYLS 500 Score = 91.5 bits (226), Expect = 2e-16, Method: Composition-based stats. Identities = 46/178 (25%), Positives = 78/178 (43%), Gaps = 13/178 (7%) Query: 611 KVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAEP 670 K + + GAR +NLK + L LP +TG+SGSGKS+L DT++ QR+ + A Sbjct: 5 KTISIRGAREHNLKSIDLDLPRNKLIVMTGLSGSGKSSLAFDTIYAEGQRRYVESLSAYA 64 Query: 671 APYRDIQGLEHFDKVIDIDQSPIGRTPR--SNPATYTGVFTPVRELFAGVPESRARGYTP 728 + ++ D++ + R + PA G +R L+A R R Y+P Sbjct: 65 RQFLEMMQKPDVDQIDRLSPGHFDRAEDHLAKPALDVGTSRDLR-LYAPALCPRRRPYSP 123 Query: 729 GRFSFNVRGGRCEACQGDGVIKVEMHFLPD--IYVPCDQCKGKR--YNRETLEIKYKG 782 G E+ ++ + F +Y+ +G++ Y +E E+ KG Sbjct: 124 A------TGLPIESQTVSQMVDRILAFGEGTRLYILAPLVRGRKGEYKKELAELMKKG 175 Score = 56.5 bits (135), Expect = 6e-06, Method: Composition-based stats. Identities = 26/79 (32%), Positives = 37/79 (46%), Gaps = 16/79 (20%) Query: 761 VPCDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAVPA--------------- 805 PC C G R E L +K I EV +M+I AR++F+ +PA Sbjct: 423 APCPACNGYRLKPEALAVKINRLHIGEVTEMSIRVARDWFETLPASFNAKQNEIAVRILK 482 Query: 806 -LARKLQTLMDVGLTYIRL 823 + +L+ L DVGL Y+ L Sbjct: 483 EIRDRLRFLNDVGLEYLSL 501 >UniRef50_A0M2R3 UvrABC system protein A-like n=1 Tax=Gramella forsetii KT0803 RepID=A0M2R3_GRAFK Length = 1495 Score = 550 bits (1418), Expect = e-155, Method: Composition-based stats. Identities = 211/734 (28%), Positives = 353/734 (48%), Gaps = 74/734 (10%) Query: 221 FETALELSGGTAVVADMDDPKAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTC 280 E + A + + A + A +A + LFSFN+P G C C Sbjct: 82 VEQSKRFQSVKATFGTLSELSAVFRVLFARYA------GKETMSKSLFSFNHPKGVCERC 135 Query: 281 DGLGVQQYFDPDRVIQNPELSLAGGAIR-----GWDRRNFYYFQMLKSLADHYKFDVEAP 335 G+G +Y D ++++ + +L GA+ G+ + L + + F+V+ P Sbjct: 136 RGIGEAEYIDLNKLVGDENKTLREGAVTTTLPNGYIVYSQITVDELNKVCKAHGFNVDIP 195 Query: 336 WGSLSANVHKVVLYGS-------GKENIEFKYMNDRGDTSIRRHPF-EGVLHNMERRYKE 387 W LS +V+L GS GK +IE + R F +G+L M + Sbjct: 196 WKQLSEEQKEVILNGSERIKVFYGKHSIESRLRWKGFKAKPREEGFYKGILPIMSNILRL 255 Query: 388 TESSAVREELAKFISNRPCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLK 447 + + KF+S+ C C+G R++ E + ++S+ + Sbjct: 256 DRNP----NILKFVSSSICPDCKGARIKPEHLKFKWKGLNFQEWMELSLKDLYDLLKRQN 311 Query: 448 LAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVG 507 L + +KI ++ D L+ +G+ +L+ + +S G+AQRI+L Q+ + L G Sbjct: 312 LVAGEQVLVDKICDQLFD----LIRLGMEEYSLNTPSTDISSGDAQRIKLIRQVNSSLQG 367 Query: 508 VMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVH 567 ++YV DEPSIGL + + L L L GNTV+VVEHD + I++AD ++++GP AGVH Sbjct: 368 ILYVFDEPSIGLSEDYQDYLRHILNRLISRGNTVMVVEHDLNFIKSADWIVELGPKAGVH 427 Query: 568 GGEVVAEGPLEAIMAVP--ESLTGQYMSGKRKIEVPKKRVPANPEKVLKLTGARGNNLKD 625 GGEV+ G ++ ++ S T + + +K +K N D Sbjct: 428 GGEVIFNGSIQEFLSAEKISSPTLAEL----------RNTTFRNDKEVK------NESVD 471 Query: 626 VTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAEPAPYRDIQGLEHFDKV 685 + P L + K+ LI + L ++ K+ Sbjct: 472 LFQPQPDELMLV------TRKTPLIMERLSNYCEKNDL--------------------KL 505 Query: 686 IDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESRARGYTPGRFSFNVRGGRCEACQG 745 + + PIG+TPRSNPATYTG+ +R+L A PES++ T FSFN + GRCEAC+G Sbjct: 506 LSVSDQPIGKTPRSNPATYTGLADKIRDLLAKSPESKSLNLTKTAFSFNNKRGRCEACEG 565 Query: 746 DGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAVPA 805 GVI + M+ + I C +C GKR+ E L++ + K I ++ +++I EA +FF Sbjct: 566 AGVITLSMNVMGTINQICPRCNGKRFKAEVLQVHWNKKNISDIYNLSISEAYDFFSEEKQ 625 Query: 806 LARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHF 865 L + L ++ +GL YI+LGQ + TLSGGEAQR+KL + +K+ + +TL +L+EP+ GLH Sbjct: 626 LQKILSLMLQLGLGYIKLGQPSNTLSGGEAQRIKLTKHFAKQ-SKKTLLLLEEPSIGLHQ 684 Query: 866 ADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVA 925 ++++LL LH+L+ Q I+ E + ++D +VD + + ++ V Sbjct: 685 QNVRELLKALHQLKAQTAGIICFESHPLFRSSSDMLVDNASKTPELKPKKVLDQR-RDVI 743 Query: 926 ECEASHTARFLKPM 939 + + T +LK + Sbjct: 744 SIKGART-HYLKDL 756 Score = 447 bits (1149), Expect = e-123, Method: Composition-based stats. Identities = 180/654 (27%), Positives = 312/654 (47%), Gaps = 37/654 (5%) Query: 257 GYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPELSLAGG------AIRGW 310 Y +EL FS N+ G C CDG+G + D D+++ + S+A G A+ + Sbjct: 856 QYENKELSASHFSNNHELGKCAICDGIGEELLPDLDKIVLDEGKSIADGLFEHNKALGYY 915 Query: 311 DRRNFYYFQMLKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKENIEFKY---MNDRGDT 367 Y +++ L Y F ++ P+ L+ N +++ G+G+ + R Sbjct: 916 GHAGSQYMAIVEELGATYGFSLKTPFKKLTNNQKEILFNGTGETVWNTSWQFKTKTREGE 975 Query: 368 SIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGTRLRREARHVYVENTP 427 +EG+ H ++ Y +T + ++L S C C G+ L+ E + Sbjct: 976 QELSMQWEGLFHYLKEEYYKTRKNKHIDKLKALFSLAECGHCSGSGLKPERLDFKIGGKS 1035 Query: 428 LPAISDMSIGHAMEFFNNLKLAGQ-RAKIAEKILKEIGDRLKFLVNVGLNYLTLSRSAET 486 + I +S ++ +N + K+ KI + + + + + +NYL L R + + Sbjct: 1036 IHEIKLLSFEALEDWLSNDNFQEEIDKKLLSKIKPYLSNTINRAMQLHINYLQLHRKSSS 1095 Query: 487 LSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEH 546 LSGGE QR+ L Q+ + L G+ Y+LDEPS GL + L+ L L + GNTV+V+EH Sbjct: 1096 LSGGENQRVALIKQLNSPLKGITYLLDEPSAGLSSDNIPDLINILKELIEKGNTVVVIEH 1155 Query: 547 DEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEVPKKRVP 606 +++ I +AD ++ +GP AG GG + +G + + +++ Y+ K K Sbjct: 1156 NKEIILSADQLVQVGPEAGKPGGYITYQGTPKNFLK--QAICHPYLKKPSKAVALK---- 1209 Query: 607 ANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQ--LNG 664 + + + ++L TL +P+G T I+G SG GK+TL+ D L P + +N Sbjct: 1210 -CAKDAINIQKLNKHSLVKDTLEVPIGGITAISGKSGIGKTTLVKDILIPSIETNTPINC 1268 Query: 665 ATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESRAR 724 +I P Y++ E + ++ +Y + + ++FA Sbjct: 1269 GSIKFPQTYKEAHYFEA---------KKLRSHAKTLLVSYLNLLKDISKIFAH-----ET 1314 Query: 725 GYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKYKGKT 784 P FS+ + +C C+G G ++ + + + C+ C+GKRYN + L + K Sbjct: 1315 ALKPRDFSYKTKTSQCPNCKGKGYLETSLDVVANSIEKCEVCQGKRYNDDILRHTVRSKN 1374 Query: 785 IHEVLDMTIEEAREFF-DAVPALARK-LQTLMDVGLTYIRLGQSATTLSGGEAQRVKLAR 842 I ++L I E +E+ VP + L L +VGL ++ L Q +LS GE QR+ L Sbjct: 1375 IADILAFNINELKEWVQGEVPEKTLQFLDQLEEVGLAHLSLDQPVQSLSSGEKQRLLLLN 1434 Query: 843 ELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIK 896 L + G +TLYILDEP+ GLH+ADI L +L KL N I++I+HN +++ Sbjct: 1435 WL-QDGATKTLYILDEPSIGLHYADIDLLYSILEKLSKA-NDILIIDHNPYLLE 1486 Score = 202 bits (515), Expect = 4e-50, Method: Composition-based stats. Identities = 94/363 (25%), Positives = 151/363 (41%), Gaps = 58/363 (15%) Query: 403 NRPCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKE 462 N+ C C G R + E V+ + I ++SI A +FF+ K+ Sbjct: 580 NQICPRCNGKRFKAEVLQVHWNKKNISDIYNLSISEAYDFFSE--------------EKQ 625 Query: 463 IGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQR 522 + L ++ +GL Y+ L + + TLSGGEAQRI+L + +L+EPSIGLHQ+ Sbjct: 626 LQKILSLMLQLGLGYIKLGQPSNTLSGGEAQRIKLTKHFAKQSKKTLLLLEEPSIGLHQQ 685 Query: 523 DNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMA 582 + LL L L+ +I E ++D ++D Sbjct: 686 NVRELLKALHQLKAQTAGIICFESHPLFRSSSDMLVD----------------------- 722 Query: 583 VPESLTGQYMSGKRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVS 642 + + E+ K+V V+ + GAR + LKD+ + LP + ITG+S Sbjct: 723 ----------NASKTPELKPKKVLDQRRDVISIKGARTHYLKDLDIDLPKNQLSVITGIS 772 Query: 643 GSGKSTLINDTLFPIAQRQLNGATIAEPAPYRDIQGLEHFDKV------IDIDQSPIGRT 696 GSGKS+++ DTL +++ A + D + I I + T Sbjct: 773 GSGKSSMVIDTLHGYGLQEMTKQFSAYQQSRVGVNFQFEVDHIAGLSPTICITRKTKSFT 832 Query: 697 PRSNPATYTGVFTPVRELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFL 756 RS+ A TG+ +R F+ + + + FS N G+C C G G L Sbjct: 833 ERSDIAKQTGIDKMLRFAFSRKAQYENKELSASHFSNNHELGKCAICDGIGEE-----LL 887 Query: 757 PDI 759 PD+ Sbjct: 888 PDL 890 Score = 139 bits (351), Expect = 5e-31, Method: Composition-based stats. Identities = 48/116 (41%), Positives = 74/116 (63%) Query: 2 DKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYA 61 D I ++GARTH LK++++ +P+++L V+TG+SGSGKSS+ DTL+ G + + SAY Sbjct: 741 DVISIKGARTHYLKDLDIDLPKNQLSVITGISGSGKSSMVIDTLHGYGLQEMTKQFSAYQ 800 Query: 62 RQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGE 117 + + + + +VDHI GLSP I I +K+ S RS + T I LR F+R + Sbjct: 801 QSRVGVNFQFEVDHIAGLSPTICITRKTKSFTERSDIAKQTGIDKMLRFAFSRKAQ 856 Score = 139 bits (350), Expect = 6e-31, Method: Composition-based stats. Identities = 66/194 (34%), Positives = 104/194 (53%), Gaps = 18/194 (9%) Query: 760 YVPCDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAV---------------P 804 C C G E L+ K GK+IHE+ ++ E ++ P Sbjct: 1011 LAECGHCSGSGLKPERLDFKIGGKSIHEIKLLSFEALEDWLSNDNFQEEIDKKLLSKIKP 1070 Query: 805 ALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLH 864 L+ + M + + Y++L + +++LSGGE QRV L ++L+ G T Y+LDEP+ GL Sbjct: 1071 YLSNTINRAMQLHINYLQLHRKSSSLSGGENQRVALIKQLNSPLKGIT-YLLDEPSAGLS 1129 Query: 865 FADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETV 924 +I L+++L +L ++GNT+VVIEHN ++I +AD +V +GPE G GG I GTP+ Sbjct: 1130 SDNIPDLINILKELIEKGNTVVVIEHNKEIILSADQLVQVGPEAGKPGGYITYQGTPKNF 1189 Query: 925 AECEASHTARFLKP 938 + H +LK Sbjct: 1190 LKQAICH--PYLKK 1201 Score = 121 bits (303), Expect = 2e-25, Method: Composition-based stats. Identities = 56/113 (49%), Positives = 76/113 (67%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 63 + + A +NLKNINL IP ++LIVVTGLSGSGKSSLA D + EG R ++ESL AY++Q Sbjct: 1 MRIINAYQNNLKNINLNIPENQLIVVTGLSGSGKSSLAMDVIANEGYRYFLESLPAYSQQ 60 Query: 64 FLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVG 116 L+ +VD IEGL P I +EQ + ++T GT++E+ R+LFAR Sbjct: 61 NAQLIPTAEVDDIEGLPPVIRVEQSKRFQSVKATFGTLSELSAVFRVLFARYA 113 Score = 83.8 bits (206), Expect = 3e-14, Method: Composition-based stats. Identities = 34/131 (25%), Positives = 58/131 (44%), Gaps = 9/131 (6%) Query: 631 PVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATI------AEPAPYRDIQGLEHFDK 684 P +TG+SGSGKS+L D + R + A+ P ++ +E Sbjct: 19 PENQLIVVTGLSGSGKSSLAMDVIANEGYRYFLESLPAYSQQNAQLIPTAEVDDIEGLPP 78 Query: 685 VIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESRARGYTPGRFSFNVRGGRCEACQ 744 VI ++QS ++ ++ T + + R LFA + + FSFN G CE C+ Sbjct: 79 VIRVEQSKRFQSVKATFGTLSELSAVFRVLFAR--YAGKETMSKSLFSFNHPKGVCERCR 136 Query: 745 GDGV-IKVEMH 754 G G ++++ Sbjct: 137 GIGEAEYIDLN 147 >UniRef50_B9XUD5 Putative uncharacterized protein n=2 Tax=Helicobacter pylori RepID=B9XUD5_HELPY Length = 467 Score = 546 bits (1408), Expect = e-153, Method: Composition-based stats. Identities = 206/480 (42%), Positives = 290/480 (60%), Gaps = 19/480 (3%) Query: 1 MDKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAY 60 MDKI ++GAR +NLKNI L IP+++ +V TGLSGSGKS+LAFDTLYAEGQRRY+ESLS+Y Sbjct: 1 MDKIIIQGARENNLKNIFLEIPKNQFVVFTGLSGSGKSTLAFDTLYAEGQRRYLESLSSY 60 Query: 61 ARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRC 120 ARQFL + KP+VD IEGL+PAI+I+QK+TS NPRSTVGTITEI+DYLRLLFAR+GE C Sbjct: 61 ARQFLDKVGKPNVDKIEGLTPAIAIDQKTTSKNPRSTVGTITEIYDYLRLLFARIGEQFC 120 Query: 121 PDHDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARID 180 P P+++ S ++ + E ++++LAPIIK++KG LE+L +GY+RA +D Sbjct: 121 PTCLEPISSMNASDIISQICHLEENSKIIILAPIIKDKKGSFNDKLESLRLKGYVRAFVD 180 Query: 181 GEVCDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVADM-DD 239 G + L + L KKHTIE VVDR + + + R+A + E AL+ S G V + D+ Sbjct: 181 GVMVRLDEEIHLHKTKKHTIEAVVDRVVINSENSSRIASTIEKALKESYGELEVEILQDN 240 Query: 240 PKAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPE 299 + +S + AC C S ELEP FSFN+P GAC +C GLG + D +++ +P Sbjct: 241 APSIRKHYSEHKACFKCKMSFEELEPLSFSFNSPKGACESCLGLGTKFSLDISKIL-DPN 299 Query: 300 LSLAGGAIR-GWDRRNFYYFQMLKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKENIEF 358 L GAI+ + YY QM + ++ D + L+ +LYG+G E I F Sbjct: 300 TPLNQGAIKVIFGYNRSYYAQMFEGFCEYNGIDTALCFNELNKEQQDALLYGNGTE-ISF 358 Query: 359 KYMNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGTRLRREA 418 + N S + P++G++ +KE +++L+ ++S + C+SCEG RL+ + Sbjct: 359 HFKN-----SPLKRPWKGIIQIAYDMFKE------QKDLSDYMSEKTCSSCEGHRLKASS 407 Query: 419 RHVYVENTPLPAISDMSIGHAMEFFNNLK----LAGQRAKIAEKILKEIGDRLKFLVNVG 474 V V + I FFN+ L Q KIAE ILKEI +R+ F G Sbjct: 408 LSVQVAGLKMADFLTKPIEEVYHFFNDPTHFSYLNEQEKKIAEPILKEILERVFFYTMWG 467 Score = 108 bits (270), Expect = 1e-21, Method: Composition-based stats. Identities = 43/114 (37%), Positives = 61/114 (53%), Gaps = 6/114 (5%) Query: 613 LKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAEPAP 672 + + GAR NNLK++ L +P F TG+SGSGKSTL DTL+ QR+ + + Sbjct: 4 IIIQGARENNLKNIFLEIPKNQFVVFTGLSGSGKSTLAFDTLYAEGQRRYLESLSSYARQ 63 Query: 673 YRDIQGLEHFDKV------IDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPE 720 + D G + DK+ I IDQ + PRS T T ++ +R LFA + E Sbjct: 64 FLDKVGKPNVDKIEGLTPAIAIDQKTTSKNPRSTVGTITEIYDYLRLLFARIGE 117 >UniRef50_UPI0001B5406F UvrA-like protein n=1 Tax=Streptomyces sp. AA4 RepID=UPI0001B5406F Length = 748 Score = 541 bits (1393), Expect = e-152, Method: Composition-based stats. Identities = 226/713 (31%), Positives = 351/713 (49%), Gaps = 66/713 (9%) Query: 231 TAVVADMDDPKAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFD 290 + V + + + P GYS +SFN+P+G CP C GLG D Sbjct: 97 RSTVGTATEVWTMLRMLFSRLGEPSAGYSPA------YSFNDPSGMCPACAGLGTVTDID 150 Query: 291 PDRVIQNPELSLAGGAIRGWDRRNFYYFQMLKSLADHYKFDVEAPWGSLSANVHKVVLYG 350 +R+I + E SL GA+ + K FD + P ++ + +L+G Sbjct: 151 GERMI-DRERSLNDGAMVF--PSFAVGSWIWKRYVYSGFFDNDLPLREWPEDLVQFLLHG 207 Query: 351 SGKENIEFKYMNDRGDTSIRRHPFEGVLHNMERRYKETE---SSAVREELAKFISNRPCA 407 ++ + ++ ++ + R E E AVR LA RPC Sbjct: 208 PTQKP------PNPLPRFPASAKYQSMVPRIRRLLVEREAKMGPAVRAALADVTRQRPCP 261 Query: 408 SCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDRL 467 C+G+RL AR + + + +EF L + A ++ + RL Sbjct: 262 ECDGSRLAPAARESRINGVSIVDLGYRDAAGLLEFCAGLD-----HEWARPLVAALRLRL 316 Query: 468 KFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERL 527 + ++ +GL +L R+ TLSGGE+QR++L +G+ L + YVLDEP+ GLH D L Sbjct: 317 ESMITLGLGHLHCYRATPTLSGGESQRLKLVRHLGSSLTDLTYVLDEPTDGLHPADVASL 376 Query: 528 LGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESL 587 + L LRD GNTV+VV+H E + AADHVID+GPGAG GG VV GP E + ++ Sbjct: 377 VDVLRRLRDHGNTVLVVDHHEAVMVAADHVIDLGPGAGEAGGRVVFHGPPEKLRKA-DTT 435 Query: 588 TGQYMSGKRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKS 647 T + + ++ K P L L G + L+++ + +P G+ T ITGV+GSGKS Sbjct: 436 TARALRTGVRL----KDTLREPTGWLPLRGLDRHTLRNIDVDVPTGVLTVITGVAGSGKS 491 Query: 648 TLINDTLFPIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGV 707 TL + E + +DQS I T RS T+ G+ Sbjct: 492 TLAGEL-------------------------AERHPRFTVVDQSQIVATSRSTVGTWLGL 526 Query: 708 FTPVRELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCK 767 PV+ FA V G +P F+ +GG C AC+G GV + ++ FL D+ PC++ + Sbjct: 527 ADPVQRAFAEVS-----GESPKLFNPRSQGG-CPACRGTGVRRTDLAFLEDVDTPCEEGR 580 Query: 768 GKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSA 827 + E L+ ++ T+ EVL + A + P + R L ++GL ++ G++ Sbjct: 581 -PGFRPEALQARW-SLTVLEVLATPVS-ALARYVPHPDVVRLAALLGELGLGHLASGRTL 637 Query: 828 TTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVV 887 TLSGGE QR+KLAR+L ++DEPT GLH +D +++ +L +L D+G T+VV Sbjct: 638 DTLSGGERQRLKLARQLDSTSDD---LLVDEPTAGLHPSDTTRMVALLDRLVDEGRTLVV 694 Query: 888 IEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLKPML 940 +EH+L V+ ADW++DLGP G GG++L +GTP+ +AE + T R+ + L Sbjct: 695 VEHSLHVVAAADWVLDLGPGAGENGGQVLYTGTPKGLAEHDG-ATGRYFRSAL 746 Score = 164 bits (416), Expect = 1e-38, Method: Composition-based stats. Identities = 54/125 (43%), Positives = 81/125 (64%), Gaps = 3/125 (2%) Query: 2 DKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYA 61 + I +RG RTHNL ++++ IP+ +L+ VTG+SGSGKSSLAF TL AE +R+ ++ A+ Sbjct: 4 NVISLRGVRTHNLADVDVDIPKHQLVAVTGVSGSGKSSLAFATLAAESRRQLYSTMPAFV 63 Query: 62 RQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEP--- 118 R L P+ + GL+ + ++Q+ N RSTVGT TE+ LR+LF+R+GEP Sbjct: 64 RTKLPHDPAPEASSLSGLTTVVVVDQRPLGTNSRSTVGTATEVWTMLRMLFSRLGEPSAG 123 Query: 119 RCPDH 123 P + Sbjct: 124 YSPAY 128 Score = 125 bits (313), Expect = 1e-26, Method: Composition-based stats. Identities = 56/148 (37%), Positives = 74/148 (50%), Gaps = 8/148 (5%) Query: 609 PEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIA 668 P V+ L G R +NL DV + +P +TGVSGSGKS+L TL ++RQL A Sbjct: 2 PSNVISLRGVRTHNLADVDVDIPKHQLVAVTGVSGSGKSSLAFATLAAESRRQLYSTMPA 61 Query: 669 ------EPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESR 722 P + L V+ +DQ P+G RS T T V+T +R LF+ + E Sbjct: 62 FVRTKLPHDPAPEASSLSGLTTVVVVDQRPLGTNSRSTVGTATEVWTMLRMLFSRLGEPS 121 Query: 723 ARGYTPGRFSFNVRGGRCEACQGDGVIK 750 A GY+P SFN G C AC G G + Sbjct: 122 A-GYSPAY-SFNDPSGMCPACAGLGTVT 147 Score = 66.1 bits (160), Expect = 7e-09, Method: Composition-based stats. Identities = 38/153 (24%), Positives = 60/153 (39%), Gaps = 42/153 (27%) Query: 6 VRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQFL 65 +RG H L+NI++ +P L V+TG++GSGKS+LA + AE R+ Sbjct: 459 LRGLDRHTLRNIDVDVPTGVLTVITGVAGSGKSTLAGE--LAERHPRFT----------- 505 Query: 66 SLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARV---------- 115 ++Q RSTVGT + D ++ FA V Sbjct: 506 ------------------VVDQSQIVATSRSTVGTWLGLADPVQRAFAEVSGESPKLFNP 547 Query: 116 -GEPRCPDHDVPLAAQTVSQMVDNVLSQPEGKR 147 + CP +T +++V + E R Sbjct: 548 RSQGGCPACRGTGVRRTDLAFLEDVDTPCEEGR 580 >UniRef50_P52087 UvrABC system protein A (Fragment) n=44 Tax=Bacteria RepID=UVRA_PSELE Length = 689 Score = 523 bits (1348), Expect = e-146, Method: Composition-based stats. Identities = 199/604 (32%), Positives = 312/604 (51%), Gaps = 47/604 (7%) Query: 218 AESFE-----TALELSGG----TAVVADMDDPKAEELLFSANFACPICGYSMRELEPRLF 268 +S E AL+ G + V + + + G + L F Sbjct: 90 VDSIEGLPPAIALQQQRGAPTTRSSVGSITTLSNSLRMLYSRAGNYPKGQDI--LYAESF 147 Query: 269 SFNNPAGACPTCDGLGVQQYFDPDRVIQNPELSLAGGAIRGWDRRNFYYFQMLKSLADHY 328 S N P GACPTC GLG ++ + ++ AI W ++ Q L+ + Sbjct: 148 SPNTPEGACPTCHGLGRVYEVTEQSMVPDDSKTIRERAIAAWPP--AWHGQNLRDILTTL 205 Query: 329 KFDVEAPWGSLSANVHKVVLYGSGKENI---------EFKYMNDRGDTSIRRHPFEGVLH 379 +D++ PW L K +L+ + + E ++ R +T + F Sbjct: 206 GYDIDIPWRDLPKKDRKWILFTEEQPVVPVYAGFTLDEVRHALKRKETPSYQGTFTSARK 265 Query: 380 NMERRYKETESSAVREELAKFISNRPCASCEGTRLRREARHVYVENTPLPAISDMSIGHA 439 + + TES A+++ +++++ + C C+G RLR E+ V + +S + + H Sbjct: 266 YVLDTFANTESPAMKKRVSQYMVGKECTLCQGKRLRPESLAVTFAGYDITELSRLPLKHL 325 Query: 440 MEFFNNLKL------------AGQRAKIAEKILKEIGDRLKFLVNVGLNYLTLSRSAETL 487 + ++A + ++I +++ +RL L+++GL YLTL RS TL Sbjct: 326 ATLLHPYAQENTPDWDKLAAKNPEKAIVTQRIAEDLSNRLSVLLSLGLGYLTLERSTPTL 385 Query: 488 SGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHD 547 S GE QR+RLA+Q+ + L GV+YVLDEPS GLH D + LL L L+ GN++ VVEH Sbjct: 386 SPGELQRLRLATQVHSNLFGVVYVLDEPSAGLHPADTQALLAALDRLKQAGNSLFVVEHA 445 Query: 548 EDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEVPKKRVPA 607 IR AD ++D+GP AG HGG ++ GP + + V ES T +Y+ ++ ++ K+ Sbjct: 446 LGVIRHADWIVDVGPEAGEHGGRILYSGPPQGLSEVAESHTRRYLFPDKEADIFAKQPSR 505 Query: 608 NPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATI 667 +P+ L++ G NNL ++T P+G+ T ++GVSGSGKS+L++ L + + L + Sbjct: 506 SPQGWLQVAGVTRNNLDNLTAAFPLGVLTSVSGVSGSGKSSLVSQVLVELVSKALGQELV 565 Query: 668 AEPAPYRDIQ-------------GLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVREL 714 AE I+ G+E +++ +DQ PIGRTPRSN ATYTG+F VR+L Sbjct: 566 AEAEQGESIEHDTPATLGGRITAGMESIKRLVTVDQKPIGRTPRSNLATYTGLFDHVRKL 625 Query: 715 FAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRE 774 FA ++AR Y GRFSFNV GRC C+G+G + VE+ FLP +Y PC CKG R+N + Sbjct: 626 FASTRAAKARHYDAGRFSFNVAKGRCGNCEGEGFVMVELLFLPSVYAPCPVCKGTRFNAK 685 Query: 775 TLEI 778 TLEI Sbjct: 686 TLEI 689 Score = 187 bits (476), Expect = 1e-45, Method: Composition-based stats. Identities = 65/113 (57%), Positives = 89/113 (78%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 63 ++VRGAR HNLK+++L IPR+ L+V TG+SGSGKSSLAF TLYAE QRRY+ES+S YAR+ Sbjct: 21 VQVRGAREHNLKDVHLDIPRNALVVFTGISGSGKSSLAFGTLYAEAQRRYLESVSPYARR 80 Query: 64 FLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVG 116 M P+VD IEGL PAI+++Q+ + RS+VG+IT + + LR+L++R G Sbjct: 81 LFHQMSVPEVDSIEGLPPAIALQQQRGAPTTRSSVGSITTLSNSLRMLYSRAG 133 Score = 151 bits (381), Expect = 2e-34, Method: Composition-based stats. Identities = 75/202 (37%), Positives = 106/202 (52%), Gaps = 27/202 (13%) Query: 763 CDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFF---------------DAVPALA 807 C C+GKR E+L + + G I E+ + ++ P A Sbjct: 292 CTLCQGKRLRPESLAVTFAGYDITELSRLPLKHLATLLHPYAQENTPDWDKLAAKNPEKA 351 Query: 808 RKLQTLMD-----------VGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYIL 856 Q + + +GL Y+ L +S TLS GE QR++LA ++ G +Y+L Sbjct: 352 IVTQRIAEDLSNRLSVLLSLGLGYLTLERSTPTLSPGELQRLRLATQVHSNLFG-VVYVL 410 Query: 857 DEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEIL 916 DEP+ GLH AD Q LL L +L+ GN++ V+EH L VI+ ADWIVD+GPE G GG IL Sbjct: 411 DEPSAGLHPADTQALLAALDRLKQAGNSLFVVEHALGVIRHADWIVDVGPEAGEHGGRIL 470 Query: 917 VSGTPETVAECEASHTARFLKP 938 SG P+ ++E SHT R+L P Sbjct: 471 YSGPPQGLSEVAESHTRRYLFP 492 Score = 105 bits (262), Expect = 1e-20, Method: Composition-based stats. Identities = 49/189 (25%), Positives = 78/189 (41%), Gaps = 13/189 (6%) Query: 610 EKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQL------N 663 E +++ GAR +NLKDV L +P TG+SGSGKS+L TL+ AQR+ Sbjct: 18 EGFVQVRGAREHNLKDVHLDIPRNALVVFTGISGSGKSSLAFGTLYAEAQRRYLESVSPY 77 Query: 664 GATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGV---PE 720 + ++ +E I + Q T RS+ + T + +R L++ P+ Sbjct: 78 ARRLFHQMSVPEVDSIEGLPPAIALQQQRGAPTTRSSVGSITTLSNSLRMLYSRAGNYPK 137 Query: 721 SRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKY 780 + Y FS N G C C G G + VP D + + Sbjct: 138 GQDILY-AESFSPNTPEGACPTCHGLGRVY---EVTEQSMVPDDSKTIRERAIAAWPPAW 193 Query: 781 KGKTIHEVL 789 G+ + ++L Sbjct: 194 HGQNLRDIL 202 Score = 56.1 bits (134), Expect = 7e-06, Method: Composition-based stats. Identities = 43/140 (30%), Positives = 62/140 (44%), Gaps = 27/140 (19%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 63 ++V G +NL N+ P L V+G+SGSGKSSL L VE +S Q Sbjct: 511 LQVAGVTRNNLDNLTAAFPLGVLTSVSGVSGSGKSSLVSQVL--------VELVSKALGQ 562 Query: 64 FLSLMEKPDVDHIEGLSPA----------------ISIEQKSTSHNPRSTVGTITEIHDY 107 L + E + IE +PA ++++QK PRS + T T + D+ Sbjct: 563 EL-VAEAEQGESIEHDTPATLGGRITAGMESIKRLVTVDQKPIGRTPRSNLATYTGLFDH 621 Query: 108 LRLLFA--RVGEPRCPDHDV 125 +R LFA R + R D Sbjct: 622 VRKLFASTRAAKARHYDAGR 641 >UniRef50_UPI00004C267E COG0178: Excinuclease ATPase subunit n=1 Tax=Streptococcus pyogenes M49 591 RepID=UPI00004C267E Length = 435 Score = 519 bits (1338), Expect = e-145, Method: Composition-based stats. Identities = 210/439 (47%), Positives = 288/439 (65%), Gaps = 8/439 (1%) Query: 219 ESFETALELSGGTAVVADMDDPKAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACP 278 +S E AL L G ++ MD ELLFS +++CP+CG+++ ELEPRLFSFN P G+CP Sbjct: 1 DSVEAALRLGDGYLMIDTMD---GNELLFSEHYSCPVCGFTVPELEPRLFSFNAPFGSCP 57 Query: 279 TCDGLGVQQYFDPDRVIQNPELSLAGGAIRGWDR-RNFYYFQMLKSLADHYKFDVEAPWG 337 TCDGLG++ D D V+ +P SL GA+ W+ + YY ML+ + D++ P+ Sbjct: 58 TCDGLGIKLEVDLDLVVPDPSKSLKEGALAPWNPISSNYYPTMLEQAMASFGVDMDTPFE 117 Query: 338 SLSANVHKVVLYGSGKENIEFKYMNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREEL 397 +L+ +VLYGSG F Y+ND G PFEGV+ N+ RRY ET S R + Sbjct: 118 ALTEEERDLVLYGSGDREFHFHYVNDFGGERNIDIPFEGVVTNVNRRYHETNSDYTRNVM 177 Query: 398 AKFISNRPCASCEGTRLRREARHVYVENT---PLPAISDMSIGHAMEFFNNLKLAGQRAK 454 +++ CA+C G RL +A V+V + IS++SI ++ L+L + Sbjct: 178 RGYMNELTCATCHGYRLNDQALCVHVGGEEGPHIGQISELSIADHLQLLEELELTENEST 237 Query: 455 IAEKILKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDE 514 IA+ I+KEI DRL FL NVGLNYLTLSR+A TLSGGE+QRIRLA+QIG+ L GV+Y+LDE Sbjct: 238 IAKPIVKEIHDRLTFLNNVGLNYLTLSRAAGTLSGGESQRIRLATQIGSNLSGVLYILDE 297 Query: 515 PSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAE 574 PSIGLHQRDN+RL+ +L +RDLGNT+IVVEHDED + AD +ID+GPGAG GGE++A Sbjct: 298 PSIGLHQRDNDRLIESLKKMRDLGNTLIVVEHDEDTMMQADWLIDVGPGAGEFGGEIIAS 357 Query: 575 GPLEAIMAVPESLTGQYMSGKRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGL 634 G + + +S+TGQY+SGK+ I VP +R N + +++ GA NNL+ + + P+G Sbjct: 358 GTPKQVAKNKKSITGQYLSGKKFIPVPLERRSGNG-RFIEIKGASQNNLQSLDVRFPLGK 416 Query: 635 FTCITGVSGSGKSTLINDT 653 F +TGVSGSGKS L+N Sbjct: 417 FIAVTGVSGSGKSALVNSI 435 Score = 172 bits (435), Expect = 7e-41, Method: Composition-based stats. Identities = 72/194 (37%), Positives = 115/194 (59%), Gaps = 18/194 (9%) Query: 760 YVPCDQCKGKRYNRETLEIKY---KGKTIHEVLDMTIEEAREFFDA-------------- 802 + C C G R N + L + +G I ++ +++I + + + Sbjct: 183 ELTCATCHGYRLNDQALCVHVGGEEGPHIGQISELSIADHLQLLEELELTENESTIAKPI 242 Query: 803 VPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTG 862 V + +L L +VGL Y+ L ++A TLSGGE+QR++LA ++ +G LYILDEP+ G Sbjct: 243 VKEIHDRLTFLNNVGLNYLTLSRAAGTLSGGESQRIRLATQIGSNLSG-VLYILDEPSIG 301 Query: 863 LHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPE 922 LH D +L++ L K+RD GNT++V+EH+ D + ADW++D+GP G GGEI+ SGTP+ Sbjct: 302 LHQRDNDRLIESLKKMRDLGNTLIVVEHDEDTMMQADWLIDVGPGAGEFGGEIIASGTPK 361 Query: 923 TVAECEASHTARFL 936 VA+ + S T ++L Sbjct: 362 QVAKNKKSITGQYL 375 Score = 64.6 bits (156), Expect = 2e-08, Method: Composition-based stats. Identities = 19/38 (50%), Positives = 29/38 (76%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLA 41 IE++GA +NL+++++ P K I VTG+SGSGKS+L Sbjct: 395 IEIKGASQNNLQSLDVRFPLGKFIAVTGVSGSGKSALV 432 >UniRef50_C1ZJW2 Excinuclease ATPase subunit n=1 Tax=Planctomyces limnophilus DSM 3776 RepID=C1ZJW2_PLALI Length = 898 Score = 497 bits (1279), Expect = e-138, Method: Composition-based stats. Identities = 222/595 (37%), Positives = 331/595 (55%), Gaps = 39/595 (6%) Query: 382 ERRYKETESSAVREELAKFISNRPCASCEGTRLRREARHVYVENTPLPAISDMSIGHAME 441 +R+ K + + +A+ +S+ CA C+G+RL ARH + E LP +++ A++ Sbjct: 299 KRQQKSASKAQSQRAVAQVVSSEKCAECQGSRLGEVARHTFWEKRILPDWLKLNVDDALK 358 Query: 442 FFNNLKLAGQRAKIAEK-----------ILKEIGDRLKFLVNVGLNYLTLSRSAETLSGG 490 ++ A Q+ + E+ ++ EI RL L +GL YLTL RSA+TLSGG Sbjct: 359 AMRQIETAWQQEALPERRSTHQGLLRQNLIPEIIRRLDGLQRLGLGYLTLDRSAQTLSGG 418 Query: 491 EAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDA 550 E R RLA+ I + G +VLDEPS GLH+ D R+ L LRD+GNTV+VVEH+ D Sbjct: 419 ELTRSRLATLIASQRKGYCFVLDEPSSGLHRADLYRVKNALNALRDVGNTVVVVEHEVDL 478 Query: 551 IRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKI----EVPKKR-- 604 ++ AD ++++GPGAG GG++V G A PES+ G ++ G R++ + P R Sbjct: 479 LQGADWLVELGPGAGHLGGKLVTAGTPRATAEAPESVIGPWLKGCRQLIRATDSPDDRQH 538 Query: 605 -----VPANPEKVL---------KLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLI 650 A PE ++ + R N+ L L +G C TGVSGSGK+T + Sbjct: 539 DQSSINKALPESIILGSCDAGFITIPPIRVRNVHVPALKLGMGQVVCFTGVSGSGKTTWL 598 Query: 651 NDTLFPIAQRQLNG-------ATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPAT 703 + + P Q+ LN T+A + +V+ I QSP+GR +S P T Sbjct: 599 MEGILPALQQALNARHQRPGSKTLASGDRSLMATIPDELIEVVTIGQSPVGRGWKSFPMT 658 Query: 704 YTGVFTPVRELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPC 763 G++ VR+++A +++ RG+TP RFS RC C G G + +E FLPD C Sbjct: 659 VAGLWDLVRKIYAATKDAKLRGFTPARFSPWHPEARCPVCLGQGEVTLEADFLPDWKTTC 718 Query: 764 DQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRL 823 + C G R+N TL I+++GK++ +VL M EA EFF LAR L ++GL Y++L Sbjct: 719 ETCAGDRFNPATLAIRFRGKSLGDVLRMEFSEAAEFFANFERLARPLHLFCELGLGYLKL 778 Query: 824 GQSATTLSGGEAQRVKLARELSKRG-TGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQG 882 GQ T+S GEAQR++LA L++ GQ + LDEPTTGLH AD++ LL V +L G Sbjct: 779 GQPMRTVSTGEAQRIRLASYLARPDFQGQRCFALDEPTTGLHPADVKALLKVFDRLVAAG 838 Query: 883 NTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLK 937 + ++V+EH+LDVI+ A I+DLGP G GG+++ G + + AS T + L+ Sbjct: 839 HLLLVVEHHLDVIRAAHQILDLGPGAGQQGGQLVAWGNQHDLRQNPASLTGQALR 893 Score = 312 bits (800), Expect = 4e-83, Method: Composition-based stats. Identities = 115/284 (40%), Positives = 165/284 (58%), Gaps = 4/284 (1%) Query: 3 KIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYAR 62 I +RGARTHNL+N+ L +P KL+ VTG+SGSGK+SLA DTL+ EGQRRY+E+L+ R Sbjct: 9 TIRIRGARTHNLQNLTLDLPLGKLVGVTGISGSGKTSLALDTLFVEGQRRYLETLNPQIR 68 Query: 63 QFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCPD 122 + L DVD I+GL P I ++ ++ S PR+T+ T+TEIHD LR+++ R G CP Sbjct: 69 RQLRRQSWADVDEIQGLPPTICLDSRTLSVGPRATLATLTEIHDLLRVVYFRAGVLHCPS 128 Query: 123 HDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARIDGE 182 + T +++D++++ PE +L LLA + + L +A G++RARI+G+ Sbjct: 129 CQSIVEQSTHDEILDDLVALPERTKLQLLAKVDDDPGISPQDRLRQIAQSGFVRARINGK 188 Query: 183 VCDLSDPPKLELQKKHT-IEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVADMDDPK 241 + D SD L IE VVDR ++D + RLAES + AL L G +V P Sbjct: 189 LIDTSDVFVLPEDAPRPVIEAVVDRVIIKDGIRSRLAESLDVALRLGHGCCLVTIDGAPD 248 Query: 242 AEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGV 285 ++ C C S + + R FS + AGACP C LGV Sbjct: 249 RH---YATIRFCGPCHRSFADPQLRTFSHFSAAGACPACLALGV 289 Score = 83.8 bits (206), Expect = 3e-14, Method: Composition-based stats. Identities = 34/109 (31%), Positives = 57/109 (52%), Gaps = 6/109 (5%) Query: 613 LKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAEPAP 672 +++ GAR +NL+++TL LP+G +TG+SGSGK++L DTLF QR+ + Sbjct: 10 IRIRGARTHNLQNLTLDLPLGKLVGVTGISGSGKTSLALDTLFVEGQRRYLETLNPQIRR 69 Query: 673 YRDIQGLEHFDKV------IDIDQSPIGRTPRSNPATYTGVFTPVRELF 715 Q D++ I +D + PR+ AT T + +R ++ Sbjct: 70 QLRRQSWADVDEIQGLPPTICLDSRTLSVGPRATLATLTEIHDLLRVVY 118 Score = 51.1 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 24/118 (20%), Positives = 51/118 (43%), Gaps = 15/118 (12%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLY--------AEGQRRYVE 55 I + R N+ L + +++ TG+SGSGK++ + + A QR + Sbjct: 561 ITIPPIRVRNVHVPALKLGMGQVVCFTGVSGSGKTTWLMEGILPALQQALNARHQRPGSK 620 Query: 56 SLSAYARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFA 113 +L++ R ++ + + L ++I Q +S T+ + D +R ++A Sbjct: 621 TLASGDRSLMATIP-------DELIEVVTIGQSPVGRGWKSFPMTVAGLWDLVRKIYA 671 >UniRef50_C9RLN7 ABC transporter related protein n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RLN7_FIBSS Length = 840 Score = 445 bits (1146), Expect = e-123, Method: Composition-based stats. Identities = 176/510 (34%), Positives = 275/510 (53%), Gaps = 22/510 (4%) Query: 402 SNRPCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILK 461 N C C G RL++ + V++ I E + + + + + Sbjct: 349 ENAECPHCHGLRLKKTYLNATVDDVSYKQILTTEFAELPELLHKI-FDNKIGQNLKATFN 407 Query: 462 EIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQ 521 + DR++ + ++G+ YLT R+ +TLSGGE QR++LAS L G++ LDEP+ GLH Sbjct: 408 SLLDRIEAINDLGIGYLTPGRAGQTLSGGELQRLKLASLSTGHLNGLLIALDEPASGLHA 467 Query: 522 RDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIM 581 D L L +R GNT++++EH+ I+ AD++I++GPGAG GGE++ +G + ++ Sbjct: 468 SDVSALWKVLEKIRKRGNTLVLIEHNPQIIKRADYIIEMGPGAGEKGGEILFQGTRDEVL 527 Query: 582 AVPESLTGQYMS--GKRKIEVPKKRVPANPEK--VLKLTGARGNNLKDVTLTLPVGLFTC 637 PES TG ++ G RK EV + EK + + ++ V P+ F+ Sbjct: 528 ENPESPTGMWIKAVGSRKSEVGRNVECHCEEKSQAILVKNFAKFDMAPVNAAFPINKFSV 587 Query: 638 ITGVSGSGKSTLINDTLFPIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTP 697 ITG SGSGKSTL+ + + A+ + D + + + Sbjct: 588 ITGQSGSGKSTLLFENIAKRAKAEEFKKL--------------GIDALSILTTGDFHGSK 633 Query: 698 RSNPATYTGVFTPVRELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLP 757 RS + G+ T +R+LFA +PES+ RGYT +FS + GGRCE C+G+GVI + + Sbjct: 634 RSTVLSAIGLTTLLRDLFAKLPESKVRGYTASKFSMHAPGGRCENCKGEGVIYDPLGY-- 691 Query: 758 DIYVPCDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVG 817 C C GKR+ E LEI++K +I ++LDM I A + F + A KL+ L+D G Sbjct: 692 -EESECPVCLGKRFRDEVLEIRFKSLSIADILDMEIGSAYKLFTNMKPFAEKLKPLVDTG 750 Query: 818 LTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHK 877 L Y+RLGQ+ LSGGE R++L+ L++ TL++ DEP GLH DIQQLL ++H Sbjct: 751 LDYLRLGQTTAHLSGGERARLRLSITLARAKAPNTLFLFDEPARGLHQKDIQQLLGLIHG 810 Query: 878 LRDQGNTIVVIEHNLDVIKTADWIVDLGPE 907 L + G+T++ IEH D + AD++V+L Sbjct: 811 LCNAGHTVIAIEHAQDFVDAADYVVELKRG 840 Score = 243 bits (620), Expect = 3e-62, Method: Composition-based stats. Identities = 91/332 (27%), Positives = 142/332 (42%), Gaps = 42/332 (12%) Query: 1 MDKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAY 60 +D I +RG R HNLKN++ P K+ VV G SG GKS+L DTL+ E +RRY+E+LS + Sbjct: 2 LDYISIRGCRLHNLKNVDAQFPLGKITVVCGPSGCGKSTLVMDTLHGESKRRYLETLSPF 61 Query: 61 ARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRC 120 A L +D EGL +++I +++ +I E + LR LFA +P C Sbjct: 62 AADLLGGKRSIPLDSAEGLPASLAIAATRGEAPAKASALSIAECDNALRTLFAAFAKPAC 121 Query: 121 PDHDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKE----------------------- 157 P P+ +Q+ +++ P G +L LA I Sbjct: 122 PICGAPMVSQSREEIIRETAGMPIGTKLQFLAKIETGNAEMATPQQVRGDINADRNDKKK 181 Query: 158 ----RKGEHTKTLENLASQGYIRARIDGEVCDLSDPPKLELQ-KKHTIEVVVDRFKVRDD 212 + K +QG+ RA DG + L+D E ++VDR VR++ Sbjct: 182 AQSKSRTTLDKLSAVFLAQGFTRAIADGTMYSLADLLPGEKVLTPKEFFIIVDRIIVREN 241 Query: 213 LTQRLAESFETALELSGGTAVVADMDDPKAEELLFSANFACPIC----------GYSMRE 262 R+AE+ + L+L+ + D E +S CP ++ Sbjct: 242 TRTRIAEAVDGTLKLTHSAITL----DIAGERKFYSTKPCCPNASDEQHQSQKSNETVAS 297 Query: 263 LEPRLFSFNNPAGACPTCDGLGVQQYFDPDRV 294 L+ R FS + C C G G+ Q P ++ Sbjct: 298 LDARAFSPYSRTSVCEYCYGTGIIQEAAPAKI 329 Score = 170 bits (432), Expect = 2e-40, Method: Composition-based stats. Identities = 80/246 (32%), Positives = 114/246 (46%), Gaps = 32/246 (13%) Query: 725 GYTPGRFSFNVRGGRCEACQGDGVI------------------KVEMHFLPDIYVPCDQC 766 FS R CE C G G+I + + D C C Sbjct: 297 SLDARAFSPYSRTSVCEYCYGTGIIQEAAPAKINEKGGGKGRAESNVESDEDENAECPHC 356 Query: 767 KGKRYNRETLEIKYKGKTIHEVLDMTIEEAREF----FDA---------VPALARKLQTL 813 G R + L + ++L E E FD +L +++ + Sbjct: 357 HGLRLKKTYLNATVDDVSYKQILTTEFAELPELLHKIFDNKIGQNLKATFNSLLDRIEAI 416 Query: 814 MDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLD 873 D+G+ Y+ G++ TLSGGE QR+KLA LS L LDEP +GLH +D+ L Sbjct: 417 NDLGIGYLTPGRAGQTLSGGELQRLKLAS-LSTGHLNGLLIALDEPASGLHASDVSALWK 475 Query: 874 VLHKLRDQGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTA 933 VL K+R +GNT+V+IEHN +IK AD+I+++GP G GGEIL GT + V E S T Sbjct: 476 VLEKIRKRGNTLVLIEHNPQIIKRADYIIEMGPGAGEKGGEILFQGTRDEVLENPESPTG 535 Query: 934 RFLKPM 939 ++K + Sbjct: 536 MWIKAV 541 Score = 131 bits (331), Expect = 1e-28, Method: Composition-based stats. Identities = 56/165 (33%), Positives = 88/165 (53%), Gaps = 15/165 (9%) Query: 400 FISNRPCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKI 459 C C G R R E + ++ + I DM IG A + F N+K Sbjct: 690 GYEESECPVCLGKRFRDEVLEIRFKSLSIADILDMEIGSAYKLFTNMKP----------- 738 Query: 460 LKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVG-VMYVLDEPSIG 518 ++LK LV+ GL+YL L ++ LSGGE R+RL+ + +++ DEP+ G Sbjct: 739 ---FAEKLKPLVDTGLDYLRLGQTTAHLSGGERARLRLSITLARAKAPNTLFLFDEPARG 795 Query: 519 LHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPG 563 LHQ+D ++LLG + L + G+TVI +EH +D + AAD+V+++ G Sbjct: 796 LHQKDIQQLLGLIHGLCNAGHTVIAIEHAQDFVDAADYVVELKRG 840 Score = 66.5 bits (161), Expect = 4e-09, Method: Composition-based stats. Identities = 28/111 (25%), Positives = 46/111 (41%), Gaps = 6/111 (5%) Query: 613 LKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAEPAP 672 + + G R +NLK+V P+G T + G SG GKSTL+ DTL ++R+ A Sbjct: 5 ISIRGCRLHNLKNVDAQFPLGKITVVCGPSGCGKSTLVMDTLHGESKRRYLETLSPFAAD 64 Query: 673 YRD------IQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAG 717 + E + I + +++ + +R LFA Sbjct: 65 LLGGKRSIPLDSAEGLPASLAIAATRGEAPAKASALSIAECDNALRTLFAA 115 Score = 55.3 bits (132), Expect = 1e-05, Method: Composition-based stats. Identities = 29/112 (25%), Positives = 47/112 (41%), Gaps = 20/112 (17%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 63 I V+ ++ +N P +K V+TG SGSGKS+L F+ + R Sbjct: 563 ILVKNFAKFDMAPVNAAFPINKFSVITGQSGSGKSTLLFENIAK--------------RA 608 Query: 64 FLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARV 115 +K +D + L+ + RSTV + + LR LFA++ Sbjct: 609 KAEEFKKLGIDALSILTTG------DFHGSKRSTVLSAIGLTTLLRDLFAKL 654 >UniRef50_Q92AV6 Lin1813 protein n=1 Tax=Listeria innocua RepID=Q92AV6_LISIN Length = 620 Score = 427 bits (1097), Expect = e-117, Method: Composition-based stats. Identities = 164/527 (31%), Positives = 268/527 (50%), Gaps = 42/527 (7%) Query: 262 ELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPELSLAG-----GAIRGWDRRNFY 316 ++ P +FS+ +P G C C G G Q + + +I + +++ G+ +G+ Sbjct: 126 DINPDIFSYLSPNGMCFDCAGTGKQFHIHMENIISSKTVTVEQVFQQIGSTKGY------ 179 Query: 317 YFQMLKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKENIEFKYMNDRGDTSIRRHPFEG 376 L L Y + + + ++YG N G TS Sbjct: 180 ----LNLLQRKYTAYFHEAFSNCPIEIQNELIYGVVD--------NYSGKTSYC------ 221 Query: 377 VLHNMERRYKETESSAVREELAKFISNRPCASCEGTRLRREARHVYVENTPLPAISDMSI 436 + + RY E++ +F S C SC G R+ EAR + + N L I+ MS+ Sbjct: 222 IERVLHNRYLRN------EDVQRFYSQEICESCNGYRICDEARMMKIANLHLGEIASMSL 275 Query: 437 GHAMEFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIR 496 EF +N + + ++ + + L L+++ L +LT+ R TLSGGE QRI Sbjct: 276 IKVKEFLDNYIEMNKLSAFGTELSRSLITTLNSLIHIKLGHLTMYREIPTLSGGELQRIF 335 Query: 497 LASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADH 556 L + + L ++YV DEP+ GLH+ + + ++ +L ++ GNTV++V HD+ I+AADH Sbjct: 336 LYDHLESKLDSLIYVFDEPTSGLHESEKQEIIESLQSIKAHGNTVLIVSHDKKIIKAADH 395 Query: 557 VIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEVPKKRVPANPEKVLKLT 616 +ID+G AG GGE+V +G + SLT +++ K+ + L ++ Sbjct: 396 IIDVGTNAGDLGGEIVYQGSYSEFLNNRHSLTSKFLDYDMTKSF--KKNKQKTKDTLSIS 453 Query: 617 GARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAEPAPYRDI 676 A NNLK++++ +P+ I GVSGSGKSTLI+ TL P+ + QL + + P +I Sbjct: 454 NANRNNLKNISIEIPINRLVGIAGVSGSGKSTLISKTLVPLCKEQLKNSDFSNP----NI 509 Query: 677 QGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESRARGYTPGRFSFNVR 736 +G++ K+I+I Q+PIGR SNP TY G++ +RELFA P++ G G FSFN Sbjct: 510 KGMDKIQKIIEISQAPIGRKANSNPVTYIGLWDKIRELFAKQPQAVKEGLKAGDFSFNSN 569 Query: 737 GGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKYKGK 783 G C +C+G GV + + + C +C G R+N +TL++ YK K Sbjct: 570 GA-CLSCKGSGVEDISIGYDIQFSKTCPECNGTRFNSKTLQVLYKKK 615 Score = 146 bits (369), Expect = 3e-33, Method: Composition-based stats. Identities = 58/188 (30%), Positives = 98/188 (52%), Gaps = 15/188 (7%) Query: 763 CDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAV----------PALARKLQT 812 C+ C G R E +K + E+ M++ + +EF D L+R L T Sbjct: 245 CESCNGYRICDEARMMKIANLHLGEIASMSLIKVKEFLDNYIEMNKLSAFGTELSRSLIT 304 Query: 813 ----LMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADI 868 L+ + L ++ + + TLSGGE QR+ L L + +Y+ DEPT+GLH ++ Sbjct: 305 TLNSLIHIKLGHLTMYREIPTLSGGELQRIFLYDHL-ESKLDSLIYVFDEPTSGLHESEK 363 Query: 869 QQLLDVLHKLRDQGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECE 928 Q++++ L ++ GNT++++ H+ +IK AD I+D+G G GGEI+ G+ Sbjct: 364 QEIIESLQSIKAHGNTVLIVSHDKKIIKAADHIIDVGTNAGDLGGEIVYQGSYSEFLNNR 423 Query: 929 ASHTARFL 936 S T++FL Sbjct: 424 HSLTSKFL 431 Score = 140 bits (353), Expect = 3e-31, Method: Composition-based stats. Identities = 50/118 (42%), Positives = 75/118 (63%), Gaps = 6/118 (5%) Query: 1 MDKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAY 60 MD I++ A +NLKNI++ IP++K IV+TG+SGSGKSSLAFD ++ EG+++Y++S+ Sbjct: 1 MDYIQIENAYINNLKNISIEIPKNKFIVITGISGSGKSSLAFDLIFEEGRKKYLQSIGMA 60 Query: 61 ARQFLSLMEKPDVDHIEGLSPAISIEQKSTSH-NPRSTVGTITEIHDYLRLLFARVGE 117 +I GLSP ++++Q NPRSTVG+ T + + LLFA G Sbjct: 61 L-----DFGTDYYTNITGLSPTVAVKQNLIRQSNPRSTVGSKTGLLNKFCLLFANEGS 113 Score = 88.8 bits (219), Expect = 1e-15, Method: Composition-based stats. Identities = 32/113 (28%), Positives = 53/113 (46%), Gaps = 10/113 (8%) Query: 2 DKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYA 61 D + + A +NLKNI++ IP ++L+ + G+SGSGKS+L TL + + S Sbjct: 448 DTLSISNANRNNLKNISIEIPINRLVGIAGVSGSGKSTLISKTLVPLCKEQLKNS----- 502 Query: 62 RQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFAR 114 P++ ++ + I I Q S T + D +R LFA+ Sbjct: 503 -----DFSNPNIKGMDKIQKIIEISQAPIGRKANSNPVTYIGLWDKIRELFAK 550 Score = 80.0 bits (196), Expect = 4e-13, Method: Composition-based stats. Identities = 42/148 (28%), Positives = 66/148 (44%), Gaps = 16/148 (10%) Query: 613 LKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQL----NGATIA 668 +++ A NNLK++++ +P F ITG+SGSGKS+L D +F +++ A Sbjct: 4 IQIENAYINNLKNISIEIPKNKFIVITGISGSGKSSLAFDLIFEEGRKKYLQSIGMALDF 63 Query: 669 EPAPYRDIQGLEHFDKVIDIDQSPIGRT-PRSNPATYTGVFTPVRELFAGVPESRA---- 723 Y +I GL + + Q+ I ++ PRS + TG+ LFA + Sbjct: 64 GTDYYTNITGLSP---TVAVKQNLIRQSNPRSTVGSKTGLLNKFCLLFANEGSYQDSESF 120 Query: 724 ----RGYTPGRFSFNVRGGRCEACQGDG 747 P FS+ G C C G G Sbjct: 121 SLANDDINPDIFSYLSPNGMCFDCAGTG 148 >UniRef50_C1ZCR5 Excinuclease ATPase subunit n=1 Tax=Planctomyces limnophilus DSM 3776 RepID=C1ZCR5_PLALI Length = 844 Score = 408 bits (1049), Expect = e-112, Method: Composition-based stats. Identities = 160/489 (32%), Positives = 236/489 (48%), Gaps = 24/489 (4%) Query: 441 EFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQ 500 E+F + + + + + R+++ +GL++L L RS LSG E +R RL Sbjct: 379 EYFASGSFEETSNLRDQSLWEHVLQRIEWCRRLGLDHLPLFRSVSGLSGTEYRRARLIPL 438 Query: 501 IGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDI 560 + AGLV +Y+LDEP GL + +L + L GN++++VEH A + A+ VI++ Sbjct: 439 LSAGLVNTLYILDEPLAGLDDQTACIVLDAIQSLLKSGNSLLMVEHHPLAKKRANFVIEM 498 Query: 561 GPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEVPKKRVPANPEKVLKLTGARG 620 GPGAG GG +V G Q ++++ RV P + Sbjct: 499 GPGAGSEGGRIVYAGS--------SPAPTQPWPEHDQVKLTAPRVLREPAGWIDPGPINL 550 Query: 621 NNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAEPAPYRDIQGLE 680 NL+ LP+GL +TG GSGKS + D L P + A P Sbjct: 551 KNLQQFQWKLPLGLLCVVTGPHGSGKSAALIDALQPTSHGDTLPALAGHP---------- 600 Query: 681 HFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESRARGYTPGRFSFNVRG-GR 739 + +D SP+ P +F VR LF PE++ R T FS +V GR Sbjct: 601 ----LWMVDSSPLKGQPSQMLIGLLDLFGEVRALFGQTPEAKNRQLTARFFSLHVAQSGR 656 Query: 740 CEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREF 799 C C+G G I ++ F + + C C GKRY R+ LEI+Y+G I E LD+T+ EA + Sbjct: 657 CSQCKGTGQISADLTFFNEASMTCPNCHGKRYRRDALEIRYRGLNIAEALDLTVAEALTY 716 Query: 800 FDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEP 859 F L L TL GL Y+RLGQ+ +LSGGE QR+KLA L + ++I DEP Sbjct: 717 FKGHHKLQSMLTTLSRTGLRYLRLGQTLKSLSGGERQRIKLALALGQPVEN-GIFICDEP 775 Query: 860 TTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSG 919 T GLH D QL+ +L G+T+ + + + + ADW++ LG + E+L SG Sbjct: 776 TMGLHDQDAHQLMHAFLELVSIGHTVWLADIHPVALSWADWVIQLGSQTPLTLPEVLFSG 835 Query: 920 TPETVAECE 928 T + E Sbjct: 836 PATTFRQSE 844 Score = 202 bits (514), Expect = 5e-50, Method: Composition-based stats. Identities = 87/316 (27%), Positives = 137/316 (43%), Gaps = 52/316 (16%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 63 I +R HNL+ +++ IP +L+VV+G+SGSGKSSLAFDTL+AEGQR Y+E+ S RQ Sbjct: 6 ILIRNLYVHNLQGVDIEIPLQQLVVVSGVSGSGKSSLAFDTLFAEGQRSYIETFSLATRQ 65 Query: 64 FLSLMEKPDVDHIEGLSPAISIEQ-KSTSHNPRS------TVGTITEIHDYLRLLFARVG 116 L E+P VD +E + P I++ Q T RS G++T I D+L+LLF R G Sbjct: 66 LLEKFERPAVDRLENIPPTIALRQLAQTGDKSRSQYVDAQNFGSVTSIADHLKLLFLRCG 125 Query: 117 EPRCPDHDVPLAAQTVSQMVDNVLSQPEGKRLMLL------------------------- 151 CP + + + +++ + P+G R+++ Sbjct: 126 SVICPTCQRKITSSSPAEVAQRLAKLPQGTRILVTMKVPEKSALQLSFDSQTAGPSRNST 185 Query: 152 ---APIIKERKGEHTKTLENLASQGYIRARIDGEVCD---LSDPPKLELQKKHT-IEVVV 204 AP + H +E L QG+ R E ++ +L + + V+V Sbjct: 186 KRTAPPRLPTEKAHQALIEELRQQGFRRGLFQTEALSENFVTHEFSKDLPQHFELVAVIV 245 Query: 205 DRFKVRDDLTQRLAESFETALELSGGTA-------------VVADMDDPKAEELLFSANF 251 DR +R+ ES ETA+ G + +D F+ + Sbjct: 246 DRLIAGSQTIERMLESCETAMRYGAGAIGLWAQTPLPESAYLACTIDGQAWYRHEFNTRY 305 Query: 252 ACPICGYSMRELEPRL 267 C C + + L Sbjct: 306 RCEPCQRDFPKPQLAL 321 Score = 136 bits (344), Expect = 3e-30, Method: Composition-based stats. Identities = 50/182 (27%), Positives = 87/182 (47%), Gaps = 14/182 (7%) Query: 402 SNRPCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILK 461 ++ C +C G R RR+A + + D+++ A+ +F Sbjct: 676 ASMTCPNCHGKRYRRDALEIRYRGLNIAEALDLTVAEALTYFKG--------------HH 721 Query: 462 EIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQ 521 ++ L L GL YL L ++ ++LSGGE QRI+LA +G + +++ DEP++GLH Sbjct: 722 KLQSMLTTLSRTGLRYLRLGQTLKSLSGGERQRIKLALALGQPVENGIFICDEPTMGLHD 781 Query: 522 RDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIM 581 +D +L+ + L +G+TV + + A+ AD VI +G + EV+ GP Sbjct: 782 QDAHQLMHAFLELVSIGHTVWLADIHPVALSWADWVIQLGSQTPLTLPEVLFSGPATTFR 841 Query: 582 AV 583 Sbjct: 842 QS 843 >UniRef50_A2V167 ABC transporter related n=1 Tax=Shewanella putrefaciens 200 RepID=A2V167_SHEPU Length = 1242 Score = 396 bits (1019), Expect = e-108, Method: Composition-based stats. Identities = 224/940 (23%), Positives = 373/940 (39%), Gaps = 125/940 (13%) Query: 2 DKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYA 61 + I +NLK+++ + ++++VV G+SGSGKS+L + AE R+ + + + Sbjct: 11 EDIFFIDVTQNNLKHLHFKMATNEMVVVVGVSGSGKSTLVNQVIAAEALRQ--QQMRNQS 68 Query: 62 RQFLSLMEKPDVDHIEGLSPAISIEQKS--TSHNPRSTVGTITEIHDYLRLLFARVGEPR 119 + + +P+ L I+I Q+S + N R GT T I++ + F VG+ Sbjct: 69 DKIIHYAVRPEFKTCSSLPSPITISQRSAHIAENIR--FGTRTRINELIVKYFVEVGQIF 126 Query: 120 CPDHDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARI 179 + Q++ + + RL L + + L + Sbjct: 127 HQQ--QSIVKQSLPAIFAHQQRFYVSSRLYLR---VINFELLGANLRHQLVKHNISSLLL 181 Query: 180 DGEVCDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETA--LELSGGTAVVADM 237 E L IE+ + + ++ L L A + Sbjct: 182 RAEGKSTLKATALGKLPAQ-IEMYEGFIAINNAEEAEQLKNISAVPVLMLDSRRVDDASI 240 Query: 238 DDPKAEELLFSANFACPICGYSMRELEPRLFSF---NNPAGACPTCDGLGVQQYFDP-DR 293 D+ +E+ F + R +LFS ++ AG C C+G G Q ++ Sbjct: 241 DEYDHDEIEFDQHGFAKDQRRIFRLPSEKLFSRATQSSTAGYCRQCNGSGEQISYNLGSV 300 Query: 294 VIQNPELSLA----GGAIRGWDRRNFYYFQMLKSLADHYKFDVEAPWGSLSANVHKVVLY 349 +I + L+ G + + L ++ DV + +L A +VL Sbjct: 301 IITDVPLTKEFLNVEKTKAGRYQGFKFLPSGLTTVLKKAGVDVTLSFDALPAVQRDIVLN 360 Query: 350 GSGKENIEFKYMNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASC 409 + S++ + FI+ CASC Sbjct: 361 TLRD---------------------------------KLASNSKDKFSQTFITKEACASC 387 Query: 410 EGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDRLKF 469 +G+ +AR V V L M+ + N + K A +L ++ LK+ Sbjct: 388 QGSGFGWQARAVRVNGYSLHEYLAMNGKQFHQRINEI-------KTAHPLLTQLKHLLKY 440 Query: 470 LVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLG 529 L + + +++ R TLS GE QR++L + + +++LDEPS L +DN ++G Sbjct: 441 LHALSIEHISFERPLTTLSSGELQRMKLLPALVENVSQRLFILDEPSSNLQFKDNLAIIG 500 Query: 530 TLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTG 589 L ++ GN +++VEH+ AD V+ IGP AG GG+ +E + Sbjct: 501 ILKTIQAKGNGILLVEHNPLYQVYADRVLCIGPKAGAGGGDYCQAPTIEQQLQG------ 554 Query: 590 QYMSGKRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTL 649 + + K P ++ L L +++ L+LP + G SGSGKSTL Sbjct: 555 --------LSISGKIAPTETQERLSLVLQPTRHIQLTQLSLPKNAINTVIGASGSGKSTL 606 Query: 650 INDTLFPIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFT 709 + L+P ++ V +D P S ATY GVF Sbjct: 607 CREMLYPALAQEKYS--------------------VELLDSRPFAGAANSIVATYLGVFD 646 Query: 710 PVRELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKV---EMHFLPDIYVPCDQC 766 +R+ F+ + + YT FSFN GG CE C+G GV+++ + C C Sbjct: 647 ELRQFFSAQSQGQ---YTTNDFSFNA-GGACEHCEGKGVVEIGSGSGSGKDIVKQTCPVC 702 Query: 767 KGKRYNRET----LEIKYKGKTIHEVL--DMTIEEAREFFDAVPALARKLQTLMDVGLTY 820 G R+ E EI K T+ +VL D T ++ + L + TL + L + Sbjct: 703 FGSRFRAEIALFHAEIDKKPVTLPQVLTSDFTWIASQ---TDLAKLHTAIATLEVLSLGH 759 Query: 821 IRLGQSATTLSGGEAQRVKLARELSKR------------GTGQTLYILDEPTTGLHFADI 868 + LG+ TLSGGE QR+KLAR L + Q + ILDEP GL + Sbjct: 760 LHLGRETQTLSGGELQRLKLARFLLTHWLNTKSTSKRAADSQQQVVILDEPCRGLDSQAV 819 Query: 869 QQLLDVLHKLRDQGNTIVVIEHNLDVIKTADWIVDLGPEG 908 +L+ +L + T++VIEHN I +D+IVDLG G Sbjct: 820 TRLVGILREHISH-CTLIVIEHNPYFIYQSDYIVDLGRSG 858 Score = 121 bits (303), Expect = 2e-25, Method: Composition-based stats. Identities = 52/168 (30%), Positives = 88/168 (52%), Gaps = 8/168 (4%) Query: 763 CDQCKGKRYNRETLEIKYKGKTIHEVLDM-------TIEEAREFFDAVPALARKLQTLMD 815 C C+G + + ++ G ++HE L M I E + + L L+ L Sbjct: 384 CASCQGSGFGWQARAVRVNGYSLHEYLAMNGKQFHQRINEIKTAHPLLTQLKHLLKYLHA 443 Query: 816 VGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVL 875 + + +I + TTLS GE QR+KL L + + Q L+ILDEP++ L F D ++ +L Sbjct: 444 LSIEHISFERPLTTLSSGELQRMKLLPALVENVS-QRLFILDEPSSNLQFKDNLAIIGIL 502 Query: 876 HKLRDQGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPET 923 ++ +GN I+++EHN AD ++ +GP+ G+GGG+ + T E Sbjct: 503 KTIQAKGNGILLVEHNPLYQVYADRVLCIGPKAGAGGGDYCQAPTIEQ 550 Score = 71.1 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 34/196 (17%), Positives = 67/196 (34%), Gaps = 12/196 (6%) Query: 218 AESFETALELSGGTAVVADMDDPKAEELLFSANFACPICGYSMRELEPRLFSFNNPAGAC 277 E+ +A G ++ D +AE+L + + + + + PR F+FN AC Sbjct: 1038 TENVASAYLQGAGVVIIRD----RAEKLSYHSVRLLSLKEEVVDRVFPRQFAFNLYKNAC 1093 Query: 278 PTCDGLGVQQYFDPDRVIQNPELSLAGGAIRGWDRRNFYYFQMLKSLADHYK-FDVEAPW 336 C+G G + I + S+ + + + + FD P Sbjct: 1094 QHCNGYGKILSYPLQEWI-DGTKSILDKGSLPFSLGKSLSKRNINHFSQKEGLFDFSKPI 1152 Query: 337 GSLSANVHKVVLYGSGKENIEFKYMNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREE 396 LS ++ YG + F+ N + + + +EG+ + Y + + Sbjct: 1153 QMLSQVERNILFYGF--KAYRFQKPNAKSMADHQYYEWEGLNSYI---YDNRKQLSSSRL 1207 Query: 397 LAKFISNRPCASC-EG 411 + C C G Sbjct: 1208 FVDEVDWVDCPFCIHG 1223 >UniRef50_C6CND4 ABC transporter related n=1 Tax=Dickeya zeae Ech1591 RepID=C6CND4_DICZE Length = 711 Score = 393 bits (1009), Expect = e-107, Method: Composition-based stats. Identities = 173/653 (26%), Positives = 278/653 (42%), Gaps = 81/653 (12%) Query: 271 NNPAGACPTCDGLGVQQYFDPDRVIQNPELSLAGGAIRGWDRRNF--YYFQMLKSLADHY 328 N ACP C GLG D D +I N L W YY Q+L + Sbjct: 123 NKYENACPHCRGLGETHEVDEDELI-NEGCRLDEKPFSCWKNGELADYYNQLLLAYCQRK 181 Query: 329 KFDVEAPWGSLSANVHKVVLYGSGKENIEFKYMNDRGDTSIRRHPFEGVLHNMERRYKET 388 + + SL+ +LYG+ +E I F+ +G RR ++GV+ Sbjct: 182 NINTSKSFSSLNQEEKNALLYGNSEEKITFR-CKHKGKIKQRRAFYKGVILYA------- 233 Query: 389 ESSAVREELAKFISNRPCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKL 448 + V + +K+ C C+G+R+ ++ + V + + E Sbjct: 234 -NENVSRKQSKYQKETTCYFCKGSRVNQKTAQLDVIGLTFENFLSLPVSKLCE------- 285 Query: 449 AGQRAKIAEKILKEIGDR-LKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVG 507 I E + I R L + N+GL YL LSRS +LSGGE Q++ + + + + G Sbjct: 286 -----VIKEACEESILLRVLSSIDNIGLGYLNLSRSIPSLSGGELQKLMFSRLLTSNISG 340 Query: 508 VMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVH 567 ++ V+DE S ++ D +L + L + NT+++ EH++ I AD IG AG Sbjct: 341 ILIVIDEISSQVNPIDYPDILSKIKKLSEK-NTLVLTEHNQCFIDNADVSFHIGKQAGSA 399 Query: 568 GGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEVPKKRVPANPEKVLKLTGARGNNLKDVT 627 GGE+ E I A+P + + KI NN+ + + Sbjct: 400 GGEICQ---PEVIQALPNK------NNRNKIS-----------DFFHFEDLNKNNIINQS 439 Query: 628 LTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAEPAPYRDIQGLEHFDKVID 687 + +P T I + + L A + I Sbjct: 440 VKIPKECVT-------------IFSGISGSGKSSLAKAICEAT-------------ESIY 473 Query: 688 IDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDG 747 + Q T RS+ A+ T + + E F S+ G + G F + GG C+AC G G Sbjct: 474 VSQKSPSYTGRSSVASITELNKIIAEYF-----SQKTGLSAGYFLPHKEGG-CKACNGTG 527 Query: 748 VIKVEMHFLPDIYVPCDQCKGKRYNRETLEIK--YKGKTIHEVLDMTIEEAREFFDAVPA 805 +IK+E F DIY+PCD C G ++ + E+ G I EV D +++ FF Sbjct: 528 IIKLERGFEKDIYIPCDTCNGSLFDPDVSEVTTPVNGMNIVEVYDAELKDISTFFQDD-K 586 Query: 806 LARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHF 865 + + L T+ +GL++++L + +LSGGE +R+KL LSK L +DEPT GL Sbjct: 587 INQILSTIAALGLSHLKLNRKTQSLSGGEMRRIKLCEILSKTRKTSKLLFIDEPTAGLDP 646 Query: 866 ADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVS 918 ++L+ +++ N IV+IEH + AD+ V +GP G GG++L Sbjct: 647 ETASKVLNFIYRKAGLFNAIVIIEHRPEAEDYADFKVSIGPCAGEQGGKVLAQ 699 Score = 119 bits (299), Expect = 5e-25, Method: Composition-based stats. Identities = 48/125 (38%), Positives = 70/125 (56%), Gaps = 6/125 (4%) Query: 1 MDKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAY 60 M I +G THNLKNI++ IP +K+ V+ G SG+GKSSLAF ++Y + + S Y Sbjct: 1 MKNIIFKGMETHNLKNISINIPLNKVTVIYGRSGAGKSSLAFSSIYQLCKDEFDAVESGY 60 Query: 61 ARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRC 120 + S + D D GL PA++I Q++T+ NPRST+ + I L L A+ Sbjct: 61 LNE--SNYKIADYD---GLIPAVAIPQRNTNTNPRSTIYSYLNIPQALYSLKAKYNS-SI 114 Query: 121 PDHDV 125 PD+ Sbjct: 115 PDYHQ 119 Score = 116 bits (292), Expect = 3e-24, Method: Composition-based stats. Identities = 47/181 (25%), Positives = 81/181 (44%), Gaps = 18/181 (9%) Query: 403 NRPCASCEGTRLRREARHVY--VENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKIL 460 PC +C G+ + V V + + D + FF + Sbjct: 540 YIPCDTCNGSLFDPDVSEVTTPVNGMNIVEVYDAELKDISTFFQD--------------- 584 Query: 461 KEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIG-AGLVGVMYVLDEPSIGL 519 +I L + +GL++L L+R ++LSGGE +RI+L + + +DEP+ GL Sbjct: 585 DKINQILSTIAALGLSHLKLNRKTQSLSGGEMRRIKLCEILSKTRKTSKLLFIDEPTAGL 644 Query: 520 HQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEA 579 ++L + L N ++++EH +A AD + IGP AG GG+V+A+ + Sbjct: 645 DPETASKVLNFIYRKAGLFNAIVIIEHRPEAEDYADFKVSIGPCAGEQGGKVLAQKAIHP 704 Query: 580 I 580 I Sbjct: 705 I 705 Score = 76.9 bits (188), Expect = 4e-12, Method: Composition-based stats. Identities = 29/139 (20%), Positives = 53/139 (38%), Gaps = 4/139 (2%) Query: 613 LKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAEPAP 672 + G +NLK++++ +P+ T I G SG+GKS+L +++ + + + + Sbjct: 4 IIFKGMETHNLKNISINIPLNKVTVIYGRSGAGKSSLAFSSIYQLCKDEFDAVESGYLNE 63 Query: 673 YR-DIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESRARGYTPGRF 731 I + + I Q PRS +Y + + L A S + Sbjct: 64 SNYKIADYDGLIPAVAIPQRNTNTNPRSTIYSYLNIPQALYSLKAKYNSSIPDYHQLK-- 121 Query: 732 SFNVRGGRCEACQGDGVIK 750 N C C+G G Sbjct: 122 -LNKYENACPHCRGLGETH 139 >UniRef50_Q4JUN2 Excinuclease ABC, subunit A n=2 Tax=Corynebacterium jeikeium RepID=Q4JUN2_CORJK Length = 923 Score = 381 bits (979), Expect = e-104, Method: Composition-based stats. Identities = 168/393 (42%), Positives = 229/393 (58%), Gaps = 22/393 (5%) Query: 562 PGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEVPKKRVPANPEKVLKLTGARGN 621 P G GG VA G A + P TG+ ++ +++ P L LT Sbjct: 533 PDTGGDGGSDVAGGAGLAGLDCP---TGRALAAG-PLKLTTDAEARTPSGTLALTDINAR 588 Query: 622 NLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAEPAPYRDIQGLEH 681 L + + +G FT ITGVSGSGKSTL++ TL + Q+ R E Sbjct: 589 TLNSLDVDFGLGTFTAITGVSGSGKSTLLH-TLASSLRDQVKTTVDDGEMASRGTSSAEK 647 Query: 682 ----------------FDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESRARG 725 ++++ I Q PIGRTPRS ATYTG+F VR+LFA E++ RG Sbjct: 648 EGSAETATAELNADIAVNRLVQISQKPIGRTPRSCLATYTGLFDRVRKLFAQTDEAKRRG 707 Query: 726 YTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKYKGKTI 785 +T RFS+NV GRC C G+G I+VE+ FLP Y PC C G RYN ETLE+ + G+TI Sbjct: 708 WTVSRFSYNVTQGRCPTCSGEGQIEVELVFLPGSYTPCPDCHGARYNAETLEVTWNGRTI 767 Query: 786 HEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELS 845 +VL++T+ EARE F A+AR L+ L VGL Y+RLGQ AT LSGGEAQR+KLA EL Sbjct: 768 ADVLELTVAEAREVFAEEGAIARALRALSAVGLDYLRLGQPATELSGGEAQRIKLATELQ 827 Query: 846 KRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADWIVDLG 905 + G T+Y++DEPTTGLH AD+ L+ L +L + GNT+VV+EH++ V AD ++++G Sbjct: 828 RAQRGHTVYLMDEPTTGLHPADVDLLMTELQRLVNNGNTVVVVEHDMRVAAQADRVLEMG 887 Query: 906 PEGGSGGGEILVSGTPETVAECEASHTARFLKP 938 P G+ GG+++ G+P TVA+ + T R L Sbjct: 888 PGAGARGGQVVADGSPATVAQT-DTATGRVLAE 919 Score = 308 bits (789), Expect = 7e-82, Method: Composition-based stats. Identities = 106/429 (24%), Positives = 177/429 (41%), Gaps = 43/429 (10%) Query: 220 SFETALELSGGTAVVADMDDPKAEELLFSANFACPICG---YSMRELEPRLFSFNNPAGA 276 + + G + V + + L + G L+ FS N AG Sbjct: 92 ALRQGAQAGGARSTVGTVSNLSNTIRLLYSRCGQYPAGVRERHGGRLDSDSFSPNTTAGM 151 Query: 277 CPTCDGLGVQQYFDPDRVIQNPELSLAGGAIRGWDRRNFYYFQMLKSLADHYKFDVEAPW 336 CP C G GV + ++ +P LS+ GAI W + + + + F ++ PW Sbjct: 152 CPECQGTGVVHEPTEESMVPDPSLSIDEGAIAAW--PGAWLGKNFRDIVAELGFPMDIPW 209 Query: 337 GSLSANVHKVVLYGSGKENIEFKYMNDRGD-TSIRRHPFEGVLHNMERRYKETESSAVRE 395 + +LY + + + V + + ET S + R Sbjct: 210 REIPKADRDWILYTDERPVVTIHPHRGADQIQRTYEGTWRSVASYLRKTLAETGSDSTRR 269 Query: 396 ELAKFISNRPCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLK-------- 447 + F+ + C C+G RL +A V P+ ++ + + + F + Sbjct: 270 RVLSFMKSSRCGVCDGRRLIVDALSVGYLGLPIDSLGALPLEDVLSRFAERRASMPADTA 329 Query: 448 ----------------------LAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTLSRSAE 485 + A+ +L + L+ +V++GL +L+L R+ Sbjct: 330 RGQADIYATTGRRLAQHAPAGGDSSAAAEAERILLSQAIPTLESVVDLGLGHLSLDRATS 389 Query: 486 TLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVE 545 TLS GE QR+RLASQ+ +GL GV YVLDEPS GLH + ++ + D GN+V++VE Sbjct: 390 TLSAGELQRLRLASQLRSGLFGVAYVLDEPSAGLHPEERRAVMRLIRGFLDAGNSVLLVE 449 Query: 546 HDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEVPKKRV 605 HD + AD ++D+GPGAG GG+++ GP A P + T + E P + Sbjct: 450 HDMHLVAEADWIVDVGPGAGELGGKILYSGP-----AAPSTATANH--NTAANEAPARSS 502 Query: 606 PANPEKVLK 614 AN + L+ Sbjct: 503 SANADAGLR 511 Score = 173 bits (438), Expect = 3e-41, Method: Composition-based stats. Identities = 73/268 (27%), Positives = 119/268 (44%), Gaps = 43/268 (16%) Query: 356 IEFKYMNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREE-LAKFI------------- 401 ++ + G+ + + + +T+ + R +++F Sbjct: 668 VQISQKPIGRTPRSCLATYTGLFDRVRKLFAQTDEAKRRGWTVSRFSYNVTQGRCPTCSG 727 Query: 402 -------------SNRPCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKL 448 S PC C G R E V + + ++++ A E F Sbjct: 728 EGQIEVELVFLPGSYTPCPDCHGARYNAETLEVTWNGRTIADVLELTVAEAREVFAE--- 784 Query: 449 AGQRAKIAEKILKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVG- 507 I L+ L VGL+YL L + A LSGGEAQRI+LA+++ G Sbjct: 785 -----------EGAIARALRALSAVGLDYLRLGQPATELSGGEAQRIKLATELQRAQRGH 833 Query: 508 VMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVH 567 +Y++DEP+ GLH D + L+ L L + GNTV+VVEHD AD V+++GPGAG Sbjct: 834 TVYLMDEPTTGLHPADVDLLMTELQRLVNNGNTVVVVEHDMRVAAQADRVLEMGPGAGAR 893 Query: 568 GGEVVAEGPLEAIMAVPESLTGQYMSGK 595 GG+VVA+G + ++ TG+ ++ + Sbjct: 894 GGQVVADGSPATVAQT-DTATGRVLAER 920 Score = 162 bits (409), Expect = 9e-38, Method: Composition-based stats. Identities = 52/114 (45%), Positives = 80/114 (70%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 63 I VR A NLK+ ++ +PR+ L+ VTG+SGSGKSSLAF TL+ E QRRY+ES++ +AR+ Sbjct: 12 IRVRDAHLRNLKHQDVSLPRNALVAVTGVSGSGKSSLAFGTLHGEAQRRYLESVAPFARR 71 Query: 64 FLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGE 117 + P V +EGL P +++ Q + + RSTVGT++ + + +RLL++R G+ Sbjct: 72 LIGGAVDPRVGSVEGLPPTVALRQGAQAGGARSTVGTVSNLSNTIRLLYSRCGQ 125 Score = 133 bits (335), Expect = 3e-29, Method: Composition-based stats. Identities = 62/225 (27%), Positives = 104/225 (46%), Gaps = 47/225 (20%) Query: 753 MHFLPDIYVPCDQCKGKRYNRETLEIKYKGKTI--------HEVLD--------MTIEEA 796 + F+ C C G+R + L + Y G I +VL M + A Sbjct: 272 LSFMKSS--RCGVCDGRRLIVDALSVGYLGLPIDSLGALPLEDVLSRFAERRASMPADTA 329 Query: 797 REFFDAVPALARKL----------------------------QTLMDVGLTYIRLGQSAT 828 R D R+L ++++D+GL ++ L ++ + Sbjct: 330 RGQADIYATTGRRLAQHAPAGGDSSAAAEAERILLSQAIPTLESVVDLGLGHLSLDRATS 389 Query: 829 TLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVI 888 TLS GE QR++LA +L + G Y+LDEP+ GLH + + ++ ++ D GN+++++ Sbjct: 390 TLSAGELQRLRLASQL-RSGLFGVAYVLDEPSAGLHPEERRAVMRLIRGFLDAGNSVLLV 448 Query: 889 EHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTA 933 EH++ ++ ADWIVD+GP G GG+IL SG +TA Sbjct: 449 EHDMHLVAEADWIVDVGPGAGELGGKILYSGPAAPSTATANHNTA 493 Score = 97.3 bits (241), Expect = 3e-18, Method: Composition-based stats. Identities = 43/156 (27%), Positives = 63/156 (40%), Gaps = 13/156 (8%) Query: 608 NPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATI 667 P+ ++++ A NLK ++LP +TGVSGSGKS+L TL AQR+ + Sbjct: 7 QPDAMIRVRDAHLRNLKHQDVSLPRNALVAVTGVSGSGKSSLAFGTLHGEAQRRYLESVA 66 Query: 668 AEPAPY------RDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELF------ 715 + +E + + Q RS T + + +R L+ Sbjct: 67 PFARRLIGGAVDPRVGSVEGLPPTVALRQGAQAGGARSTVGTVSNLSNTIRLLYSRCGQY 126 Query: 716 -AGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIK 750 AGV E FS N G C CQG GV+ Sbjct: 127 PAGVRERHGGRLDSDSFSPNTTAGMCPECQGTGVVH 162 Score = 63.8 bits (154), Expect = 3e-08, Method: Composition-based stats. Identities = 30/122 (24%), Positives = 57/122 (46%), Gaps = 13/122 (10%) Query: 8 GARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESL---------- 57 ART L ++++ +TG+SGSGKS+L TL + + + ++ Sbjct: 586 NART--LNSLDVDFGLGTFTAITGVSGSGKSTL-LHTLASSLRDQVKTTVDDGEMASRGT 642 Query: 58 SAYARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGE 117 S+ ++ + +++ ++ + I QK PRS + T T + D +R LFA+ E Sbjct: 643 SSAEKEGSAETATAELNADIAVNRLVQISQKPIGRTPRSCLATYTGLFDRVRKLFAQTDE 702 Query: 118 PR 119 + Sbjct: 703 AK 704 >UniRef50_B3SEI3 Putative uncharacterized protein (Fragment) n=1 Tax=Trichoplax adhaerens RepID=B3SEI3_TRIAD Length = 1063 Score = 377 bits (968), Expect = e-102, Method: Composition-based stats. Identities = 156/389 (40%), Positives = 233/389 (59%), Gaps = 38/389 (9%) Query: 206 RFKVRDDLTQRLAESFETALELSGGTAVVAD---------MDDPKAEELLFSANFACPIC 256 R K+ D+ R+ +S E L++S G V D + + L+FS F+CPI Sbjct: 272 RVKIDDNSRDRIVDSVENILKISKGLLYVEIKSIPKDCSSPDIEEGKVLIFSEKFSCPIS 331 Query: 257 GYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPELSLAGGAIRGWDRRNF- 315 G+S+ E+EPR+FSFN+P GACP C+GLG + FDP +I + L+L GAI W +++ Sbjct: 332 GFSLTEIEPRIFSFNSPYGACPKCNGLGKEMSFDPQLIIPDKTLTLLEGAIAPWKKKHSK 391 Query: 316 -------YYFQMLKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKENIEFKYMNDRGDTS 368 +Y +L +LA HY FD+ P+ L ++ +++ G+ E+I+F Y + ++ Sbjct: 392 YSNTQYKFYESLLNALAIHYNFDLNTPYEELPNDIKDIIMNGNNGEDIKFSYQDGYRQST 451 Query: 369 IRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGTRLRREARHVYVENTPL 428 + + PF+GV+ +E + +TES+ + EELAK+ C+ C+G R+++E+ V + N + Sbjct: 452 VNQ-PFKGVIQILEEKLNKTESNYIIEELAKYQIQINCSDCQGFRVKKESLCVKINNLHI 510 Query: 429 PAISDMSIGHAMEFFNNLK--LAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTLSRSAET 486 ++ SI A + NLK L + I++ ILKEI R+ T Sbjct: 511 GNVTKFSISDAYSWIKNLKDNLDQTQINISKLILKEIERRIS----------------ST 554 Query: 487 LSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEH 546 LSGGE+QRIRLASQIG+ L GV+YVLDEPSIGLHQ DN++L+ +L LRDLGN++IVVEH Sbjct: 555 LSGGESQRIRLASQIGSSLTGVLYVLDEPSIGLHQSDNDKLINSLKELRDLGNSIIVVEH 614 Query: 547 DEDAIRAADHVIDIGPGAGVHGGEVVAEG 575 DED + +D++IDIG AG G V EG Sbjct: 615 DEDTMVQSDYLIDIGKYAG--GRCEVCEG 641 Score = 294 bits (754), Expect = 7e-78, Method: Composition-based stats. Identities = 127/188 (67%), Positives = 157/188 (83%) Query: 737 GGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEA 796 GGRCE C+GDG++K+EMHFLPD+YV CD+C GKRYN++TL+IKY GK I ++L+MT++E Sbjct: 633 GGRCEVCEGDGLLKIEMHFLPDVYVKCDECNGKRYNKDTLQIKYNGKNIADILEMTVDEG 692 Query: 797 REFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYIL 856 FFD +P + KL+ L VGL YI +GQSATTLSGGEAQRVKLA+ELSK+ TG+TLYIL Sbjct: 693 IIFFDKIPLINDKLKALNSVGLGYISIGQSATTLSGGEAQRVKLAKELSKKSTGRTLYIL 752 Query: 857 DEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEIL 916 DEPTTGLH DIQ LL VLH+L D GNT++VIEHNLDVIKTAD+I+D+GP+G GGE++ Sbjct: 753 DEPTTGLHSHDIQNLLQVLHELVDMGNTVIVIEHNLDVIKTADYIIDIGPKGDIKGGEVV 812 Query: 917 VSGTPETV 924 GTPE V Sbjct: 813 AIGTPEEV 820 Score = 189 bits (480), Expect = 5e-46, Method: Composition-based stats. Identities = 71/179 (39%), Positives = 103/179 (57%), Gaps = 15/179 (8%) Query: 403 NRPCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKE 462 C C G R ++ + + I +M++ + FF+ + L Sbjct: 656 YVKCDECNGKRYNKDTLQIKYNGKNIADILEMTVDEGIIFFDKIPL-------------- 701 Query: 463 IGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGV-MYVLDEPSIGLHQ 521 I D+LK L +VGL Y+++ +SA TLSGGEAQR++LA ++ G +Y+LDEP+ GLH Sbjct: 702 INDKLKALNSVGLGYISIGQSATTLSGGEAQRVKLAKELSKKSTGRTLYILDEPTTGLHS 761 Query: 522 RDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAI 580 D + LL L L D+GNTVIV+EH+ D I+ AD++IDIGP + GGEVVA G E + Sbjct: 762 HDIQNLLQVLHELVDMGNTVIVIEHNLDVIKTADYIIDIGPKGDIKGGEVVAIGTPEEV 820 Score = 116 bits (291), Expect = 4e-24, Method: Composition-based stats. Identities = 60/194 (30%), Positives = 103/194 (53%), Gaps = 15/194 (7%) Query: 758 DIYVPCDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQT-LMDV 816 I + C C+G R +E+L +K I V +I +A + + + Q + + Sbjct: 483 QIQINCSDCQGFRVKKESLCVKINNLHIGNVTKFSISDAYSWIKNLKDNLDQTQINISKL 542 Query: 817 GLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLH 876 L I + ++TLSGGE+QR++LA ++ TG LY+LDEP+ GLH +D +L++ L Sbjct: 543 ILKEIER-RISSTLSGGESQRIRLASQIGSSLTG-VLYVLDEPSIGLHQSDNDKLINSLK 600 Query: 877 KLRDQGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGT----------PETVAE 926 +LRD GN+I+V+EH+ D + +D+++D+G G G + G P+ + Sbjct: 601 ELRDLGNSIIVVEHDEDTMVQSDYLIDIGKYAG--GRCEVCEGDGLLKIEMHFLPDVYVK 658 Query: 927 CEASHTARFLKPML 940 C+ + R+ K L Sbjct: 659 CDECNGKRYNKDTL 672 >UniRef50_C9RP94 Excinuclease ATPase subunit-like protein n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RP94_FIBSS Length = 708 Score = 358 bits (919), Expect = 7e-97, Method: Composition-based stats. Identities = 163/653 (24%), Positives = 277/653 (42%), Gaps = 72/653 (11%) Query: 264 EPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPELSLAGGAIRGWDRRNFYYFQMLKS 323 E F N CP C GLG + D +++ + + W+ ++ ML Sbjct: 115 EYGFFVLNKKENVCPVCKGLGFVKRLDQTKIVDVKKKIKDV-PFKPWNTHKDFFSGMLNF 173 Query: 324 LADHYKFDVEAPWGSLSANVHKVVLYGSGKENIEFKYMNDRGDTSIRRHPFEGVLHNMER 383 + D + +G L + K +LYG G + +Y G + R + GV+ + Sbjct: 174 FCEEKHIDCDCEFGKLPFELQKKLLYGEGLKKYSVRYKT-LGRFARRTCRYFGVMTGVP- 231 Query: 384 RYKETESSAVREELAKFISNRPCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFF 443 T S + + S+ C C G + ++ R + V + + + S + +E+ Sbjct: 232 -MLRTSSIS-----ENYYSDFTCEECNGEKYAKKYRELTVCGLSIGEVLNKSFENVVEWA 285 Query: 444 NNLKLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGA 503 + + L R +K+I LK + + L YL L+RS +LSGGE QR+RL + Sbjct: 286 SEVGL---RFPSMMFSVKKIIAFLKKSIELNLAYLNLNRSIPSLSGGELQRLRLVQIFNS 342 Query: 504 GLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPG 563 + + VLDEP GL + + + + +++L+ +T++V++H E+ I+AA +VI +G G Sbjct: 343 QIKNTLVVLDEPLAGLSKTEKDVVEKNILNLK-KNHTILVIDHHENFIKAASNVIALGEG 401 Query: 564 AGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEVPKKRVPANPEKVLKLTGARGNN- 622 G GG++V K+ ++ V V+ + R ++ Sbjct: 402 GGKLGGKLV--------------------DYKKYLKSQNVNVAWIKRPVVDVRDYRIDHP 441 Query: 623 ---LKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAEPAPYRDIQGL 679 K V + L G I G SG GKS L+ + I Sbjct: 442 IYQFKGVDVNLAYGRSNLIMGASGIGKSILLREYFPRI---------------------- 479 Query: 680 EHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESRARGYTPGRFSFNVRG-- 737 FDK + + Q + S AT VF + LFA + F N+ G Sbjct: 480 --FDKYVYVSQKSLVGNSHSFVATVLDVFGEIIGLFAKKYSKKKT------FFSNLVGSE 531 Query: 738 GRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAR 797 G C C G GVI + ++ C +C G +N E + GK I ++ MTI+EA Sbjct: 532 GACPECSGSGVIIYNQNRNEEVSFVCAKCMGTGFNTELKKYFINGKNIFDLWQMTIDEAA 591 Query: 798 EFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILD 857 +FF + L+ + L ++ LGQ+ ++LSGGE R+KLA+ +Y +D Sbjct: 592 DFFANNAKIEIPLKNAQKLLLGHLTLGQNTSSLSGGENVRIKLAQI---HKISVDVYGID 648 Query: 858 EPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADWIVDLGPEGGS 910 EP GL +I + ++ ++G T+ V++H K D + +L + G Sbjct: 649 EPFKGLSKTEIHAVASYINSFVEEGKTVAVVDHEECAEKYFDSLYELINKNGV 701 Score = 110 bits (276), Expect = 2e-22, Method: Composition-based stats. Identities = 35/114 (30%), Positives = 61/114 (53%), Gaps = 5/114 (4%) Query: 2 DKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYA 61 + I V+ T+NLK I++ I ++ + ++ G SGSGKSSLA+DT+ G + S + Sbjct: 3 EDIVVKEISTNNLKGISVHIKKNAINIIVGPSGSGKSSLAYDTIAEIGLQELNSMYSDFG 62 Query: 62 RQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARV 115 + K V + + ++Q + ++N RST+GT I Y+ +F+ V Sbjct: 63 GE-----PKYCVGEYHNILVTVPVKQINNNNNVRSTIGTYFNIVPYVINIFSFV 111 Score = 81.1 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 36/140 (25%), Positives = 60/140 (42%), Gaps = 8/140 (5%) Query: 613 LKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAEPAP 672 + + NNLK +++ + I G SGSGKS+L DT+ I ++LN Sbjct: 5 IVVKEISTNNLKGISVHIKKNAINIIVGPSGSGKSSLAYDTIAEIGLQELNSMYSDFGGE 64 Query: 673 YRDIQGLEHFDKVIDIDQSPI--GRTPRSNPATYTGVFTPVRELFAGVPESRARGYTPGR 730 + G E+ + ++ + I RS TY + V +F+ V + G+ Sbjct: 65 PKYCVG-EYHNILVTVPVKQINNNNNVRSTIGTYFNIVPYVINIFSFV-LKKEYGF---- 118 Query: 731 FSFNVRGGRCEACQGDGVIK 750 F N + C C+G G +K Sbjct: 119 FVLNKKENVCPVCKGLGFVK 138 >UniRef50_B6W739 Putative uncharacterized protein n=1 Tax=Anaerococcus hydrogenalis DSM 7454 RepID=B6W739_9FIRM Length = 269 Score = 305 bits (782), Expect = 5e-81, Method: Composition-based stats. Identities = 118/199 (59%), Positives = 154/199 (77%), Gaps = 1/199 (0%) Query: 623 LKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAEPAPYRDIQGLEHF 682 +K + + P+ FT +TGVSGSGKS+L+N+ L+ ++LN + P + I+G+E Sbjct: 1 MKGIDVKFPLSTFTAVTGVSGSGKSSLVNEILYKSVTKKLNKSKT-HPGKHDSIEGVEQI 59 Query: 683 DKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESRARGYTPGRFSFNVRGGRCEA 742 DK+I IDQSPIGRTPRSNPATYT +F +R++FA E++ +G+ GRFSFNV+GGRCEA Sbjct: 60 DKIISIDQSPIGRTPRSNPATYTKLFDNIRDVFAMTTEAKMKGFDKGRFSFNVKGGRCEA 119 Query: 743 CQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDA 802 C+GDG IKV+M FLPD+YVPC+ C G+RYNRETLE+KYKGK I EVLDMT+EEA +FF+ Sbjct: 120 CKGDGTIKVDMMFLPDVYVPCEVCHGQRYNRETLEVKYKGKNISEVLDMTVEEALKFFEN 179 Query: 803 VPALARKLQTLMDVGLTYI 821 P++ RKLQTL DVGL YI Sbjct: 180 HPSIVRKLQTLYDVGLGYI 198 Score = 101 bits (253), Expect = 1e-19, Method: Composition-based stats. Identities = 33/112 (29%), Positives = 53/112 (47%), Gaps = 7/112 (6%) Query: 14 LKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQFLSLMEKPDV 73 +K I++ P VTG+SGSGKSSL + LY ++ +S + + + Sbjct: 1 MKGIDVKFPLSTFTAVTGVSGSGKSSLVNEILYKSVTKKLNKSKTHPGKH-------DSI 53 Query: 74 DHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCPDHDV 125 + +E + ISI+Q PRS T T++ D +R +FA E + D Sbjct: 54 EGVEQIDKIISIDQSPIGRTPRSNPATYTKLFDNIRDVFAMTTEAKMKGFDK 105 Score = 67.3 bits (163), Expect = 3e-09, Method: Composition-based stats. Identities = 24/91 (26%), Positives = 38/91 (41%), Gaps = 18/91 (19%) Query: 403 NRPCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKE 462 PC C G R RE V + + + DM++ A++FF N Sbjct: 137 YVPCEVCHGQRYNRETLEVKYKGKNISEVLDMTVEEALKFFEN--------------HPS 182 Query: 463 IGDRLKFLVNVGLNYL----TLSRSAETLSG 489 I +L+ L +VGL Y+ T++R+ S Sbjct: 183 IVRKLQTLYDVGLGYIKNRSTINRTFRRRSP 213 >UniRef50_O26254 Methyl coenzyme M reductase system, component A2 homolog n=8 Tax=Euryarchaeota RepID=O26254_METTH Length = 590 Score = 230 bits (588), Expect = 1e-58, Method: Composition-based stats. Identities = 115/495 (23%), Positives = 204/495 (41%), Gaps = 80/495 (16%) Query: 465 DRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDN 524 D ++ L VGL + A LSGGE QR+ +A Q+ + +LDEP+ R Sbjct: 154 DAMELLRVVGLEH-KADHFAPVLSGGEKQRLIMARQLAKK--PRVLLLDEPATMSCPRTK 210 Query: 525 ERLLGTLIHL-RDLGNTVIVVEHDEDAIR-AADHVIDIGPGAGVHGGEVVAEGPLEAIMA 582 + +L + ++ R+LG TV++V H + AD V+ + GG +V EG Sbjct: 211 QEILDAIKNINRELGVTVVLVSHLPEVHEYLADRVVLM------DGGRIVDEGE------ 258 Query: 583 VPESLTGQYMSGKRKIEVPKKRVP-ANPEKVLKLTGARGN----------NLKDVTLTLP 631 P S+ G+++ IE P + P A +++L++ G + DV L + Sbjct: 259 -PSSIIGRFL---EDIEPPVEYTPGARGKEILRVRGLGKRFVLLKGGAVLEMSDVNLDIA 314 Query: 632 VGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQS 691 G I G SG+GK+ L+ R + G + + + +++ + Sbjct: 315 EGEMVSIIGPSGAGKTVLL---------RMIGGLDLPDEGTVE----FRLNSEWVNMHEP 361 Query: 692 PIGRTPRSNPATYTGVFTPVRELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKV 751 + R + + + FA V + R R EA + + + Sbjct: 362 GVKRMGIRRKMGF------MHQEFALVHHATIRSQIASRLGVKGEHVVAEAKKRADELGI 415 Query: 752 EMHFLPDIYVPCDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAVP--ALARK 809 L +Y D + E +Y+ E L ++ E E F + P + R Sbjct: 416 SDMVLDVLYQLTDLPE--------TEARYR----LEKLGLSPEILEELFPSFPDSEVKRY 463 Query: 810 LQTLMD-VGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADI 868 + + + L L + + LSGGE R LA L+ R + ILDEP L + Sbjct: 464 AEPIFRALDLPLSILDRRSYELSGGERVRATLALVLASR---PDVLILDEPFGDLDPITL 520 Query: 869 QQLLDVLHKLRDQ-GNTIVVIEHNLDVI-KTADWIVDLGPEGGSGGGEILVSGTPETVAE 926 + + + L ++ + G TI+++ H++D I + + V + G I++ G P + + Sbjct: 521 RMVSNSLKRINMEFGTTIIMVSHHVDFIRELSTRAVMV------EDGRIVMDGEPGELCD 574 Query: 927 --CEASHTARFLKPM 939 E SH AR+L+ + Sbjct: 575 EFVERSH-ARYLQRV 588 Score = 42.6 bits (99), Expect = 0.077, Method: Composition-based stats. Identities = 14/29 (48%), Positives = 18/29 (62%) Query: 623 LKDVTLTLPVGLFTCITGVSGSGKSTLIN 651 L DV L + G I G+SGSGK+TL+ Sbjct: 44 LSDVNLEVAEGEILGILGMSGSGKTTLLR 72 >UniRef50_A9VGN1 ABC transporter related n=62 Tax=Bacillaceae RepID=A9VGN1_BACWK Length = 1056 Score = 195 bits (497), Expect = 5e-48, Method: Composition-based stats. Identities = 95/321 (29%), Positives = 154/321 (47%), Gaps = 36/321 (11%) Query: 613 LKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDT----------LFPIAQRQL 662 +K+ NN+ + +P I G+SGSGK+TL L P A+ Q Sbjct: 1 MKVNQLIANNINKLDTVIPFNKSLGIAGLSGSGKTTLCQTIGEESKKRLVSLLPKAEYQY 60 Query: 663 NGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESR 722 I E + I+ +E V+ + +S I PRS T+TGVF +RE + Sbjct: 61 LFPNIME-TNFSAIK-MEEMPLVLFLGKSSISSNPRSTIGTHTGVFKEIRE-----KLAE 113 Query: 723 ARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRE----TLEI 778 +P FSFN + G C C+G G K + C +CKGKRY+ E T+E+ Sbjct: 114 EFNLSPEVFSFNNQLGWCAGCKGRGTTK---------NIECKKCKGKRYSEEVEQRTIEL 164 Query: 779 KYKGKTIHEVLDMTIEEAREFFDAV---PALARKLQTLMDVGLTYIRLGQSATTLSGGEA 835 + TI ++ D+++E + + A LQ ++++ + Y+ L + TLSGGE Sbjct: 165 FAESHTISDINDLSVESILSLAEELNISEAKQHILQNIINMNIGYLTLNRIMGTLSGGEL 224 Query: 836 QRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVI 895 R+ LA ++ + + I+DE + GL + Q+L+ + KL + N I +I+H+ V+ Sbjct: 225 TRLYLAEFMA--VSENAVIIIDEISVGLDHETLLQILEEIEKLGCK-NQIWLIDHSDTVL 281 Query: 896 KTADWIVDLGPEGGSGGGEIL 916 T D + GP G GG+I+ Sbjct: 282 DTTDEQMFFGPGSGKYGGKIV 302 Score = 195 bits (496), Expect = 6e-48, Method: Composition-based stats. Identities = 120/510 (23%), Positives = 199/510 (39%), Gaps = 128/510 (25%) Query: 406 CASCEGTRLRREARHVYVE----NTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILK 461 C C+G R E +E + + I+D+S+ + L ++ + I Sbjct: 145 CKKCKGKRYSEEVEQRTIELFAESHTISDINDLSVESILSLAEELNISEAKQHI------ 198 Query: 462 EIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQ 521 L+ ++N+ + YLTL+R TLSGGE R+ LA + V+ + DE S+GL Sbjct: 199 -----LQNIINMNIGYLTLNRIMGTLSGGELTRLYLAEFMAVSENAVIII-DEISVGLD- 251 Query: 522 RDNERLLGTLIHLRDLG--NTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEA 579 +E LL L + LG N + +++H + + D + GPG+G +GG++V E P Sbjct: 252 --HETLLQILEEIEKLGCKNQIWLIDHSDTVLDTTDEQMFFGPGSGKYGGKIVKESP--- 306 Query: 580 IMAVPESLTGQYMSGKRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCIT 639 R + +R P + N++ +P +T Sbjct: 307 ----------------RPKPILSERNYEMPTEYYTFHELYCRNIQMTEFQIPKNRLVTVT 350 Query: 640 GVSGSGKSTLINDTLFPIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGR-TPR 698 G SG GKSTL+N+ L ++ DK++ + Q T R Sbjct: 351 GESGCGKSTLVNECLATDFLKRYPK------------------DKLVMVGQDRNQSITSR 392 Query: 699 SNPATYTGVFTPVRELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPD 758 S AT+ + + + Y+ +++ F Sbjct: 393 STVATFLDI------------KKKLTKYS---------------------EEIDDIFERS 419 Query: 759 IYVPCDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGL 818 I D+ +I YK ++ L + L RK QTL Sbjct: 420 IEDIIDE-------IPNEDIAYKRLSLLIKLGLG----------YLTLERKTQTL----- 457 Query: 819 TYIRLGQSATTLSGGEAQRVKLAREL-SKRGTGQTLYILDEPTTGLHFADIQQLLDVLHK 877 S GE Q V L EL +K TL+I DEP+ GL + Q +D + Sbjct: 458 ------------STGEFQCVHLVSELFAKTRNPHTLFIFDEPSKGLSQNILNQFIDSVRG 505 Query: 878 -LRDQGNTIVVIEHNLDVIKTADWIVDLGP 906 L+D+ +I++IEHN +++++D+IVD G Sbjct: 506 ILQDESVSIIMIEHNSYMLESSDYIVDFGK 535 Score = 91.9 bits (227), Expect = 1e-16, Method: Composition-based stats. Identities = 35/109 (32%), Positives = 60/109 (55%), Gaps = 4/109 (3%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 63 ++V +N+ ++ VIP +K + + GLSGSGK++L T+ E ++R V L Q Sbjct: 1 MKVNQLIANNINKLDTVIPFNKSLGIAGLSGSGKTTLC-QTIGEESKKRLVSLLPKAEYQ 59 Query: 64 FL--SLMEKP-DVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLR 109 +L ++ME +E + + + + S S NPRST+GT T + +R Sbjct: 60 YLFPNIMETNFSAIKMEEMPLVLFLGKSSISSNPRSTIGTHTGVFKEIR 108 Score = 75.4 bits (184), Expect = 1e-11, Method: Composition-based stats. Identities = 31/191 (16%), Positives = 70/191 (36%), Gaps = 15/191 (7%) Query: 264 EPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPELSLAGGAIRGWDRRNFYYFQ---- 319 + R F F + CP+C G + FD + IQ+ + G + ++Q Sbjct: 657 DTRSFDFYSQDNHCPSCSGRLQIEVFDKEITIQDKNVPFWDGLFDPEIMKVLKFYQYEKI 716 Query: 320 --MLKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKENIEFKYMNDRGDTSIRRHPFEGV 377 + + + + D+ + +S YG + + + +G T F + Sbjct: 717 EFLFEEIKNELGHDLSKSYNDMSEEEKHTFWYGY----FDKSFYDKKGKTRRTWVGFNTI 772 Query: 378 LHNMERRYKETESSAVREELAKFISNRPCASCEGTRLRREARHVYVENTPLPAISDMSIG 437 + Y +A++E++ C C+GT L + + +T + I + + Sbjct: 773 IGG----YIVISKAAIKEDIKTSKEMMKCPICKGTLLN-HHKPLNFGDTDIREIINQPLN 827 Query: 438 HAMEFFNNLKL 448 ++ +L + Sbjct: 828 EVLKIVGDLPV 838 Score = 56.5 bits (135), Expect = 5e-06, Method: Composition-based stats. Identities = 27/98 (27%), Positives = 41/98 (41%), Gaps = 25/98 (25%) Query: 12 HNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQFLSLMEKP 71 N++ IP+++L+ VTG SG GKS+L + L A FL K Sbjct: 332 RNIQMTEFQIPKNRLVTVTGESGCGKSTLVNECL---------------ATDFLKRYPKD 376 Query: 72 DVDHIEGLSPAISIEQ-KSTSHNPRSTVGTITEIHDYL 108 + + + Q ++ S RSTV T +I L Sbjct: 377 KL---------VMVGQDRNQSITSRSTVATFLDIKKKL 405 >UniRef50_C0XR98 Possible excinuclease ABC, subunit A n=1 Tax=Corynebacterium lipophiloflavum DSM 44291 RepID=C0XR98_9CORY Length = 382 Score = 189 bits (481), Expect = 3e-46, Method: Composition-based stats. Identities = 52/278 (18%), Positives = 110/278 (39%), Gaps = 12/278 (4%) Query: 220 SFETALELSGGTAVVADMDDPKAEELLFSAN---FACPICGYSMRELEPRLFSFNNPAGA 276 + E + G ++V + L + +A + + L+ FS N AG Sbjct: 16 ALEQSKTSGGARSIVGTFSTLSSSVRLLYSRCGDYAEGVRERNGGRLDSDAFSPNTTAGM 75 Query: 277 CPTCDGLGVQQYFDPDRVIQNPELSLAGGAIRGWDRRNFYYFQMLKSLADHYKFDVEAPW 336 CP C G GV ++ +P S+ GAI W + + ++ D ++++PW Sbjct: 76 CPKCQGTGVVHRPVESTMVPDPSKSINEGAIAAW--PGAWAGKNFLAILDALDVNLDSPW 133 Query: 337 GSLSANVHKVVLYGSGKENIEFKYMNDRGD-TSIRRHPFEGVLHNMERRYKETESSAVRE 395 L +L+ + + + + ++ V + + ET S A+R Sbjct: 134 QDLDQKDRDWILFTDERPMVTISPVRGADQIRKTYKGTWKSVANCLTDTLHETHSDALRR 193 Query: 396 ELAKFISNRPCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNL------KLA 449 + +++ C C+G RL +A V + P+ A++ + + + + + Sbjct: 194 RVLSYMNQSTCDMCDGRRLTPDALLVTYASLPIDALTALPMDELLAILDERFDPEPKEGE 253 Query: 450 GQRAKIAEKILKEIGDRLKFLVNVGLNYLTLSRSAETL 487 R + +L ++ L+ +V +G+ +L+L R A Sbjct: 254 DARDEAERLLLSQLVSTLRTVVELGIEHLSLDRPAAQR 291 Score = 65.3 bits (158), Expect = 1e-08, Method: Composition-based stats. Identities = 21/48 (43%), Positives = 31/48 (64%) Query: 70 KPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGE 117 P V +IEGL P +++EQ TS RS VGT + + +RLL++R G+ Sbjct: 2 DPKVGNIEGLPPTVALEQSKTSGGARSIVGTFSTLSSSVRLLYSRCGD 49 Score = 48.4 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 21/83 (25%), Positives = 34/83 (40%), Gaps = 7/83 (8%) Query: 675 DIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPE----SRARG---YT 727 + +E + ++QS RS T++ + + VR L++ + R R Sbjct: 4 KVGNIEGLPPTVALEQSKTSGGARSIVGTFSTLSSSVRLLYSRCGDYAEGVRERNGGRLD 63 Query: 728 PGRFSFNVRGGRCEACQGDGVIK 750 FS N G C CQG GV+ Sbjct: 64 SDAFSPNTTAGMCPKCQGTGVVH 86 >UniRef50_A4EWE8 Oligopeptide/dipeptide uptake family ABC transporter, ATP-binding protein n=3 Tax=Rhodobacterales RepID=A4EWE8_9RHOB Length = 526 Score = 180 bits (457), Expect = 3e-43, Method: Composition-based stats. Identities = 101/505 (20%), Positives = 178/505 (35%), Gaps = 94/505 (18%) Query: 441 EFFNNLKL-AGQRAKIAEKILKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLAS 499 + +L L G A + E+ D++ + L LSGG+ QR+ +A Sbjct: 111 QLVESLSLHQGLVGAAARARVLELLDKVG----IRDAETRLGSYPHQLSGGQRQRVMIAM 166 Query: 500 QIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRD-LGNTVIVVEHDEDAIR-AADHV 557 + + + DEP+ L ++L L L+ G ++ + HD + +R AD V Sbjct: 167 ALANK--PEILIADEPTTALDVTIQAQILELLADLKKSEGMGLLFITHDLNVVRRIADRV 224 Query: 558 IDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEVPKKRVPANPEKVLKLTG 617 + GE+V EGP + A P+ Q + P+ E V Sbjct: 225 CVMK------NGEIVEEGPAAEVFANPQHAYTQKLLAAEPSGAPEPVADEAAEMVAT--- 275 Query: 618 ARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAEPAPYRDIQ 677 KD+ + P+ + +R + P+ Sbjct: 276 ------KDLKVWFPIEK---------------------GLLKRTVGHVKAVNPSSINVRA 308 Query: 678 GLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESRARGYTPGRFSFNVRG 737 G +G S T +R L A E R +G ++S R Sbjct: 309 G------------ETLGIVGESGSGKTTMALAIMR-LIASEGEVRFQGQDLRQWS--TRD 353 Query: 738 GRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAR 797 R ++ +M V D +I +G IH+V Sbjct: 354 LR--------SLRKDMQI-----VFQDPFGSLSPRMTCAQIISEGLAIHDVDQ------- 393 Query: 798 EFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILD 857 P + + +VGL + + SGG+ QR+ +AR + R L +LD Sbjct: 394 ----DRPPRELVAEVMEEVGLDPAAMDRYPHEFSGGQRQRIAIARAMVLR---PKLVVLD 446 Query: 858 EPTTGLHFADIQQLLDVLHKLRDQ-GNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEIL 916 EPT+ L Q++++L L+++ G + I H+L+V++ V + + G+I+ Sbjct: 447 EPTSALDMTVQVQIVELLRGLQERYGLAYLFISHDLNVVRAMSHRVVVMKQ-----GDIV 501 Query: 917 VSGTPETVAECE-ASHTARFLKPML 940 SG + + + +T L L Sbjct: 502 ESGNAQEIFDAPKEDYTRHLLAAAL 526 >UniRef50_C3PL69 Putative ABC transport system n=1 Tax=Corynebacterium aurimucosum ATCC 700975 RepID=C3PL69_CORA7 Length = 195 Score = 177 bits (450), Expect = 2e-42, Method: Composition-based stats. Identities = 67/187 (35%), Positives = 100/187 (53%), Gaps = 6/187 (3%) Query: 759 IYVPCDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARK-----LQTL 813 ++V C +C+G R + + E G +I EV M + +A + + + L+ Sbjct: 10 VFVACPECQGTRLAQHSRESYLNGVSIAEVCGMELADAAAWLRTINSPLAVAPLCGLEAA 69 Query: 814 MDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLD 873 +D+GL Y+ LGQ +TLSGGE QR+KLA L R + +LDEPT G H DI LL Sbjct: 70 LDLGLGYLTLGQPLSTLSGGERQRLKLAVRLCDRKATADIIVLDEPTVGRHHKDIDALLC 129 Query: 874 VLHKLRDQGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTA 933 + L D T++ +EH+ + AD I+DLGP GS GGE++ + +P + TA Sbjct: 130 LFDTLVDAHLTLICVEHHRAFLAHADHIIDLGPGAGSAGGEVVAACSPREFLGT-DTLTA 188 Query: 934 RFLKPML 940 R+L L Sbjct: 189 RYLTQAL 195 Score = 174 bits (441), Expect = 1e-41, Method: Composition-based stats. Identities = 65/201 (32%), Positives = 102/201 (50%), Gaps = 11/201 (5%) Query: 393 VREELAKFISNRPCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQR 452 +R + + + C C+GTRL + +R Y+ + + M + A + + Sbjct: 1 MRVFVERAVVFVACPECQGTRLAQHSRESYLNGVSIAEVCGMELADAAAWLRTINSPLAV 60 Query: 453 AKIAEKILKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIG-AGLVGVMYV 511 A + L+ +++GL YLTL + TLSGGE QR++LA ++ + V Sbjct: 61 APLCG---------LEAALDLGLGYLTLGQPLSTLSGGERQRLKLAVRLCDRKATADIIV 111 Query: 512 LDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEV 571 LDEP++G H +D + LL L D T+I VEH + ADH+ID+GPGAG GGEV Sbjct: 112 LDEPTVGRHHKDIDALLCLFDTLVDAHLTLICVEHHRAFLAHADHIIDLGPGAGSAGGEV 171 Query: 572 VAEGPLEAIMAVPESLTGQYM 592 VA + ++LT +Y+ Sbjct: 172 VAACSPREFLGT-DTLTARYL 191 >UniRef50_Q12GF5 ABC transporter related n=28 Tax=Proteobacteria RepID=Q12GF5_POLSJ Length = 554 Score = 173 bits (438), Expect = 4e-41, Method: Composition-based stats. Identities = 104/528 (19%), Positives = 184/528 (34%), Gaps = 94/528 (17%) Query: 417 EARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDR--LKFLVNVG 474 EA+ + + + + + G+ + R L L +VG Sbjct: 92 EAQMRELRGRRIGMVFQEPMTALNPVMRIGEQIGEVFDAHGSVPAAEKRRRILAALADVG 151 Query: 475 LN--YLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLI 532 L L + LSGG+ QR+ +A + L V+ + DEP+ L ++L + Sbjct: 152 LPDPELLIDSYPFRLSGGQRQRVMIACALV--LEPVLLIADEPTTALDVTTQAQILKLVR 209 Query: 533 HLRDL-GNTVIVVEHDEDAI-RAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQ 590 L+ G V+ + HD + ADHV+ + G+VV GP A++ P+ + Sbjct: 210 ELQQRRGTAVLFITHDFGVVSEIADHVVVM------QTGKVVEAGPASAVLRAPQHPYTR 263 Query: 591 YMSGKRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLI 650 + I + + + V+++ + C SG+G Sbjct: 264 KLIAA--IPHGQAQRATPTDDVVRVLQVQD---------------LCKIYKSGNG----- 301 Query: 651 NDTLFPIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTP 710 LF A+ + GL + +S G++ F Sbjct: 302 ---LFKRARSVQAAKDVNFELHRGQTLGL--------VGESGSGKSSVGRCLVGLAPFDS 350 Query: 711 VRELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKR 770 R LF + R + G EA + + +++M F Sbjct: 351 GRILF------KGRNLSQG-----------EAFRREAAGRIQMVF--------QDPYASL 385 Query: 771 YNRETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTL 830 R + G I + + T A+AR ++ L VGL + Sbjct: 386 NPRHRVGAAIAGGPIAQGVSKT-----------EAMARAMELLNLVGLGADAAQRYPHEF 434 Query: 831 SGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQ-GNTIVVIE 889 SGG+ QR+ +AR L+ + L + DEP + L + Q+L++ ++R+Q +V I Sbjct: 435 SGGQRQRIGIARALAMQ---PELLVADEPVSALDVSVQAQVLELFAQVREQFQLAMVFIT 491 Query: 890 HNLDVI-KTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFL 936 H+L V + D I + GE++ G V R L Sbjct: 492 HDLRVAGQMCDHIAVMQR------GEVVEYGETHKVLGNPQHAYTRQL 533 Score = 82.7 bits (203), Expect = 6e-14, Method: Composition-based stats. Identities = 33/142 (23%), Positives = 57/142 (40%), Gaps = 11/142 (7%) Query: 463 IGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQR 522 + ++ L VGL R SGG+ QRI +A + + + V DEP L Sbjct: 410 MARAMELLNLVGLGADAAQRYPHEFSGGQRQRIGIARALA--MQPELLVADEPVSALDVS 467 Query: 523 DNERLLGTLIHLRDLG-NTVIVVEHDEDAI-RAADHVIDIGPGAGVHGGEVVAEGPLEAI 580 ++L +R+ ++ + HD + DH+ A + GEVV G + Sbjct: 468 VQAQVLELFAQVREQFQLAMVFITHDLRVAGQMCDHI------AVMQRGEVVEYGETHKV 521 Query: 581 MAVP-ESLTGQYMSGKRKIEVP 601 + P + T Q + ++ P Sbjct: 522 LGNPQHAYTRQLIDAVPRLASP 543 >UniRef50_D1YY55 ABC transporter ATP binding protein n=1 Tax=Methanocella paludicola SANAE RepID=D1YY55_METPS Length = 546 Score = 172 bits (435), Expect = 7e-41, Method: Composition-based stats. Identities = 104/478 (21%), Positives = 192/478 (40%), Gaps = 87/478 (18%) Query: 468 KFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERL 527 K L VG+ +L L RS LSGGE Q++ +A+ + +++ DEP+ L R + Sbjct: 122 KALKRVGIAHL-LKRSTHELSGGEKQKLAIAAALAVN--PEVFLFDEPTSQLDPRSTLEI 178 Query: 528 LGTLIHLRDLGNTVIVVEHD-EDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPES 586 L L+ G T+I++E ED I D + A + G ++A G + Sbjct: 179 YTILKELKAEGKTIILIEQKIEDIIDIVDRI------AVIDHGRLIACGTPRE------A 226 Query: 587 LTGQYMSGKRKIE-VPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSG 645 L + + V + + EK+L L+ + L G SG+G Sbjct: 227 LLSRALFNVMPYPCVSRLAMEFGSEKMLLSVDEGRQFLEARGIRLKPG--------SGNG 278 Query: 646 KSTLINDTLFPIAQRQ-----LNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSN 700 +S I+ P+ Q NG + + + + G +V+ I +GR Sbjct: 279 RS--IDGGAQPVLQVNGLRFGYNGNDVLKGISFTVMPG-----EVVAI----LGRNGSGK 327 Query: 701 PATYTGVFTPVRELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIY 760 T + + + R + G++ + + D+ Sbjct: 328 TTTLKNIIGLL----------KPREH--------------------GMVLLNGRDVKDMK 357 Query: 761 VPCDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTY 820 V + + + + +T+ E + + A F P R ++ L +VGL Sbjct: 358 VE-EAAHYAGFLFQNPDTMLFAETVMEEVIFS--PANLGFADAPE--RAVKALEEVGLLD 412 Query: 821 IRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRD 880 + + L GE R+ +A L+ G L ILDEPTTGL + +L++V+ KL+ Sbjct: 413 KK-DEYPRYLGNGEKLRLCVASILAM---GPRLIILDEPTTGLDDNECDRLMEVVLKLKA 468 Query: 881 QGNTIVVIEHNLDVI-KTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLK 937 G ++++ H+++++ + A+ ++ + GG+I G+P V + A+ LK Sbjct: 469 DGVAVIMVSHDMNLVARYANKVIVIA------GGQIFRQGSPAEVLKDAAAMGEASLK 520 Score = 105 bits (263), Expect = 6e-21, Method: Composition-based stats. Identities = 34/118 (28%), Positives = 60/118 (50%), Gaps = 11/118 (9%) Query: 807 ARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFA 866 A + L VG+ ++ L +S LSGGE Q++ +A L+ +++ DEPT+ L Sbjct: 118 ADVEKALKRVGIAHL-LKRSTHELSGGEKQKLAIAAALA---VNPEVFLFDEPTSQLDPR 173 Query: 867 DIQQLLDVLHKLRDQGNTIVVIEHNL-DVIKTADWIVDLGPEGGSGGGEILVSGTPET 923 ++ +L +L+ +G TI++IE + D+I D I + G ++ GTP Sbjct: 174 STLEIYTILKELKAEGKTIILIEQKIEDIIDIVDRIAVIDH------GRLIACGTPRE 225 Score = 96.2 bits (238), Expect = 6e-18, Method: Composition-based stats. Identities = 47/206 (22%), Positives = 83/206 (40%), Gaps = 27/206 (13%) Query: 414 LRR-EARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIG-------- 464 L+ E V + + DM + A + L AE +++E+ Sbjct: 338 LKPREHGMVLLNGR---DVKDMKVEEAAHYAGFLFQNPDTMLFAETVMEEVIFSPANLGF 394 Query: 465 -----DRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGL 519 +K L VGL L GE R+ +AS + G + +LDEP+ GL Sbjct: 395 ADAPERAVKALEEVGLL-DKKDEYPRYLGNGEKLRLCVASILAMG--PRLIILDEPTTGL 451 Query: 520 HQRDNERLLGTLIHLRDLGNTVIVVEHDED-AIRAADHVIDIGPGAGVHGGEVVAEGPLE 578 + +RL+ ++ L+ G VI+V HD + R A+ VI I GG++ +G Sbjct: 452 DDNECDRLMEVVLKLKADGVAVIMVSHDMNLVARYANKVIVI------AGGQIFRQGSPA 505 Query: 579 AIMAVPESLTGQYMSGKRKIEVPKKR 604 ++ ++ + +E+ +R Sbjct: 506 EVLKDAAAMGEASLKSPPIVELSGER 531 Score = 44.2 bits (103), Expect = 0.023, Method: Composition-based stats. Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 1/48 (2%) Query: 618 ARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGA 665 A L D++L + G F ITG SG+GK+TL + +F + G Sbjct: 14 ASEPTLHDISLDIQKGEFILITGRSGAGKTTL-SRAMFGALHHDIGGE 60 >UniRef50_A3VG48 ABC oligopeptide transporter, fused ATPase subunits n=1 Tax=Rhodobacterales bacterium HTCC2654 RepID=A3VG48_9RHOB Length = 531 Score = 172 bits (435), Expect = 8e-41, Method: Composition-based stats. Identities = 100/487 (20%), Positives = 171/487 (35%), Gaps = 94/487 (19%) Query: 456 AEKILKEIGDR-LKFLVNVGL--NYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVL 512 A ++ R ++ VGL + R LSGG QR+ +A + + + Sbjct: 118 AHAPGGDLRARAVEAFKAVGLREPERQIDRFPHELSGGMCQRVMIALALACS--PRVLIA 175 Query: 513 DEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAI-RAADHVIDIGPGAGVHGGEV 571 DEP+ GL +L + G V+++ HD A+ + D +I I G + Sbjct: 176 DEPTTGLDVTLTGEILDLIAAQARDGRGVLIISHDIAALSKVCDRLIVI------EAGRI 229 Query: 572 VAEGPLEAIMAVPESLTGQYMSGKRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLP 631 V +GP + ++ P+S + + + +++ EK Sbjct: 230 VEDGPTQTVIHAPKSNYTRRLIDA--VPDIRRKRAVTDEK-------------------- 267 Query: 632 VGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQS 691 G + G Q +PA + D + + +S Sbjct: 268 RGETLMVLSEVG--------------VTYQGRFGRNRKPALAGVNLEIRKGDTIAIVGES 313 Query: 692 PIGRTPRSNPATYTGVFTPVRELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKV 751 G++ S T G+ P RG R SF + G ++ Sbjct: 314 GSGKSTLSR--TIMGMLKP------TTGRVDFRGTDIARLSFGRKRG----------LRR 355 Query: 752 EMHFLPDIYVPCDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQ 811 M V D +I + + L + +E DA+ A + Sbjct: 356 HMQM-----VCQDPLDALNPRMSVEDI------VSDPLRL-VER-----DAMRRSALIDR 398 Query: 812 TLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQL 871 L +VGL + LSGG+AQRV LAR L+ L +LDEPT+ L Q+ Sbjct: 399 ALTEVGLDPSFRTRLPHELSGGQAQRVGLARALA---IDPDLVVLDEPTSALDVTVQAQI 455 Query: 872 LDVLHKLRD-QGNTIVVIEHNLDVIKT-ADWIVDLGPEGGSGGGEILVSGTPETVAECEA 929 L ++ +L + + V++ H+L ++ D +V + G I+ G E + Sbjct: 456 LTLIRRLTERRDRAYVMVSHDLATVRALCDRVVVVD------AGRIVEDGPTEQIFTDPK 509 Query: 930 SHTARFL 936 S R L Sbjct: 510 SPKTRAL 516 Score = 100 bits (249), Expect = 3e-19, Method: Composition-based stats. Identities = 46/178 (25%), Positives = 78/178 (43%), Gaps = 19/178 (10%) Query: 423 VENTPLPAIS-DMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTLS 481 V PL A++ MS+ + + L+L + A ++ + L VGL+ + Sbjct: 360 VCQDPLDALNPRMSVEDIVS--DPLRLVERDAMRRSALID------RALTEVGLDPSFRT 411 Query: 482 RSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRD-LGNT 540 R LSGG+AQR+ LA + + + VLDEP+ L ++L + L + Sbjct: 412 RLPHELSGGQAQRVGLARALA--IDPDLVVLDEPTSALDVTVQAQILTLIRRLTERRDRA 469 Query: 541 VIVVEHDEDAIRA-ADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRK 597 ++V HD +RA D V+ + G +V +GP E I P+S + + Sbjct: 470 YVMVSHDLATVRALCDRVVVV------DAGRIVEDGPTEQIFTDPKSPKTRALLDAAP 521 >UniRef50_Q28MT7 ABC transporter related n=1 Tax=Jannaschia sp. CCS1 RepID=Q28MT7_JANSC Length = 502 Score = 170 bits (432), Expect = 2e-40, Method: Composition-based stats. Identities = 101/480 (21%), Positives = 173/480 (36%), Gaps = 100/480 (20%) Query: 431 ISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTLSRSAETLSGG 490 ++SI F + + G + E + K L VGL+ ++ E L+ G Sbjct: 92 FENLSIAE-NVFIDRMPRTG---PFVRRRAME-REAAKMLARVGLD-VSSDTKVERLAPG 145 Query: 491 EAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEH-DED 549 E Q + +A + +G + +LDEP+ L R+ ERL L LR G ++I + H + Sbjct: 146 ERQLVEIAKALASG--ARIIILDEPTTSLTNRETERLFAVLRELRSEGCSMIYISHVLQH 203 Query: 550 AIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEVPKKRVPANP 609 + AD V+ + G V GG + A VP ++ ++ P++ VPA Sbjct: 204 VLDLADDVVVLRDGTHVGGGPI-------ADFDVPRMISMMVGREIDQL-FPQRTVPAGE 255 Query: 610 EKVLKLTGARGNNL-KDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIA 668 + VL L G + +DV+L + G I G+ G+G++ L Sbjct: 256 DVVLSLEGVSQPGICRDVSLQVHKGEVLGIFGLMGAGRTELARIVFGL------------ 303 Query: 669 EPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESRARGYTP 728 H D + ++ + PR A+ T R + +S R Sbjct: 304 ----------DPHVDGTVTLNGDQLSGGPRERIASGMAFVTEDRRAEGLLMDSDIRE--- 350 Query: 729 GRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKYKGKTIHEV 788 N+ +G G FL +R EI K Sbjct: 351 -----NMGLVALPRFKGGG------GFLSQ----------QRLLESAREIGAK------- 382 Query: 789 LDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRG 848 + + L Q +LSGG Q+V + + L R Sbjct: 383 -------------------------LRLKAADESLSQPCRSLSGGNQQKVVIGKWLVDR- 416 Query: 849 TGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIK-TADWIVDLGPE 907 L I+DEPT G+ ++ ++++L +G I+ + L+ + AD I+ + Sbjct: 417 --PALLIMDEPTRGIDVGAKYEVFTIMNELAAEGTGILYVSSELEELMGVADRILVMREG 474 Score = 97.3 bits (241), Expect = 2e-18, Method: Composition-based stats. Identities = 43/148 (29%), Positives = 70/148 (47%), Gaps = 6/148 (4%) Query: 780 YKGKTIHEVLDMTIEEAREFFDAVPALAR-KLQTLMDVGLTYIRLGQSATTLSGGEAQRV 838 ++ +I E + + F A+ R + L VGL + L+ GE Q V Sbjct: 92 FENLSIAENVFIDRMPRTGPFVRRRAMEREAAKMLARVGLD-VSSDTKVERLAPGERQLV 150 Query: 839 KLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDV-IKT 897 ++A+ L+ +G + ILDEPTT L + ++L VL +LR +G +++ I H L + Sbjct: 151 EIAKALA---SGARIIILDEPTTSLTNRETERLFAVLRELRSEGCSMIYISHVLQHVLDL 207 Query: 898 ADWIVDLGPEGGSGGGEILVSGTPETVA 925 AD +V L GGG I P ++ Sbjct: 208 ADDVVVLRDGTHVGGGPIADFDVPRMIS 235 >UniRef50_B9JQ55 Peptide ABC transporter, ATP-binding protein n=1 Tax=Agrobacterium radiobacter K84 RepID=B9JQ55_AGRRK Length = 587 Score = 170 bits (432), Expect = 2e-40, Method: Composition-based stats. Identities = 106/474 (22%), Positives = 163/474 (34%), Gaps = 51/474 (10%) Query: 481 SRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHL-RDLGN 539 SR LSGG+ QR+ +A + + ++DEP+ GL +L + L + G Sbjct: 148 SRYPAQLSGGQLQRVAIAMAVA--PRPRLVIMDEPTTGLDVSTQADVLAMMTRLCQAHGI 205 Query: 540 TVIVVEHDEDAIR-AADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKI 598 + V HD + AD V+ + + G +V G + A P + + Sbjct: 206 ATLYVSHDLAVVAHIADKVMVL------YAGRIVEAGSKGDVFARPAHPYTRSLLDAVPS 259 Query: 599 EVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIA 658 +++ A L R + P C S KS ++ A Sbjct: 260 MREARKLRAIDGMAPPLRD-REHGCV-FRARCPHATAVCAVAPPLSSKSAANHEVACHWA 317 Query: 659 QRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGV 718 A A I + +V+ + R + E A V Sbjct: 318 DEIDGQAKTAPLFVVNRILENDKVLEVLSLS----ARYGDRTVLRDVSMTLSRGECLAVV 373 Query: 719 PESRARGYTPGRFSFNVRGGRC---EACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRET 775 ES G FS RC G I +E L +R + Sbjct: 374 GES---GSGKTTFS------RCMIGLHSDWKGEIVLEGRRLSQ-SAAHRSPDDRRKLQYV 423 Query: 776 LEIKY----KGKTIHEVLDMTIEEAREFFDAVPALARKLQ---TLMDVGLTYIRLGQSAT 828 + Y KTI L + I F R Q L V L + + Sbjct: 424 FQNPYGSLNPRKTIGGNLAVPI----GHFQTSDDQNRDRQIKAALERVELRSAHIDRFPN 479 Query: 829 TLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVI 888 LSGGE QRV +AR L + I DE T+ L + ++++L L G ++V + Sbjct: 480 ELSGGEKQRVAIARALL---ASPDVMICDEITSALDVSVQAAIVELLRSLMSDGLSLVFV 536 Query: 889 EHNLDVIK-TADWIVDLGPEGGSGGGEILVSGTPETVAECE-ASHTARFLKPML 940 HNL V++ AD + L GEI+ G+ E+V A++T L L Sbjct: 537 THNLGVVRSLADSVAVLDK------GEIVEIGSSESVLSRPSAAYTKSLLANTL 584 Score = 102 bits (255), Expect = 7e-20, Method: Composition-based stats. Identities = 46/156 (29%), Positives = 72/156 (46%), Gaps = 13/156 (8%) Query: 785 IHEVLDMTIEEAREFFDAVPALARKLQTLMDVGL--TYIRLGQSATTLSGGEAQRVKLAR 842 I E L + R+ A AR + + +VGL T L + LSGG+ QRV +A Sbjct: 107 IGEQLVEGLMRGRDALSPHVAKARMAELMSEVGLAATPEFLSRYPAQLSGGQLQRVAIAM 166 Query: 843 ELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKL-RDQGNTIVVIEHNLDVIKT-ADW 900 ++ R L I+DEPTTGL + +L ++ +L + G + + H+L V+ AD Sbjct: 167 AVAPR---PRLVIMDEPTTGLDVSTQADVLAMMTRLCQAHGIATLYVSHDLAVVAHIADK 223 Query: 901 IVDLGPEGGSGGGEILVSGTPETVAECEASHTARFL 936 ++ L G I+ +G+ V A R L Sbjct: 224 VMVL------YAGRIVEAGSKGDVFARPAHPYTRSL 253 Score = 91.9 bits (227), Expect = 1e-16, Method: Composition-based stats. Identities = 32/125 (25%), Positives = 55/125 (44%), Gaps = 9/125 (7%) Query: 469 FLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLL 528 L V L + R LSGGE QR+ +A + A + + DE + L ++ Sbjct: 463 ALERVELRSAHIDRFPNELSGGEKQRVAIARALLAS--PDVMICDEITSALDVSVQAAIV 520 Query: 529 GTLIHLRDLGNTVIVVEHDEDAIR-AADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESL 587 L L G +++ V H+ +R AD V A + GE+V G E++++ P + Sbjct: 521 ELLRSLMSDGLSLVFVTHNLGVVRSLADSV------AVLDKGEIVEIGSSESVLSRPSAA 574 Query: 588 TGQYM 592 + + Sbjct: 575 YTKSL 579 >UniRef50_A8LNW8 Ribose/xylose/arabinose/galactoside ABC-type transport system protein n=1 Tax=Dinoroseobacter shibae DFL 12 RepID=A8LNW8_DINSH Length = 498 Score = 168 bits (426), Expect = 8e-40, Method: Composition-based stats. Identities = 105/519 (20%), Positives = 188/519 (36%), Gaps = 121/519 (23%) Query: 414 LRRE---ARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAK--IAEKILKEIGDRLK 468 L A V V ++S+ + F L + K I + DR+ Sbjct: 76 LNPRISAAAGVMVIFQDFSLFPNLSVAENIAFTTQLSTRQRLFKFRAVRDIARAALDRIG 135 Query: 469 FLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLL 528 V + L+ ETL + Q + + + + + ++DEP+ L +++ RL Sbjct: 136 --VQIDLDAR-----VETLPVAQKQLVAICRALASK--AQLIIMDEPTTALTEKEVRRLQ 186 Query: 529 GTLIHLRDLGNTVIVVEHDE-DAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESL 587 G + L++ G VI V H + + ++ V+ + G+ VAEGP +SL Sbjct: 187 GIIRMLKEEGVAVIFVSHKLAEVLEVSEKVVVL------RNGKKVAEGPASEF--DTQSL 238 Query: 588 TGQYMSGKRKIEVPKKRVPANPEKVLKLTG-ARGNNLKDVTLTLPVGLFTCITGVSGSGK 646 T +M+G+ EVP V A + ++++ G + + D++ L G ITG+ G G+ Sbjct: 239 T-YHMTGRDVPEVPPSDVAAGAQTLMQVQGLGKAGSFSDISFDLRTGEVLGITGLLGCGR 297 Query: 647 STLINDTLFPIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTG 706 +++ + + P P D Q + IG P G Sbjct: 298 TSVAKALFGLVTPDAGSILVDGSPVPLGDPQAA---------SLARIGYVPEDRL--TEG 346 Query: 707 VFTPVRELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQC 766 +F + +S R GR + GG Sbjct: 347 LF---------LSQSILRNVAVGRLDAHTSGG---------------------------- 369 Query: 767 KGKRYNRETLEIKYKGKTIHEVLDMT--IEEAREFFDAVPALARKLQTLMDVGLTYIRLG 824 LDMT +EA ++ + A ++ Sbjct: 370 ---------------------FLDMTGLAKEASDWLRRLKVKAPDVEA------------ 396 Query: 825 QSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNT 884 +LSGG QRV LAR LS+ + IL+ P+ G+ + D++ +L +G Sbjct: 397 -PVQSLSGGNQQRVALARWLSR---APRVLILNGPSVGVDVGSKADIHDIIRELAREGIG 452 Query: 885 IVVIEHNL-DVIKTADWIVDLGPEGGSGGGEILV--SGT 920 ++VI +L +++ T ++ + G I+ GT Sbjct: 453 VIVISDDLPELLATCHRVLVMRE------GRIIDALEGT 485 Score = 87.7 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 37/162 (22%), Positives = 73/162 (45%), Gaps = 19/162 (11%) Query: 780 YKGKTIHEVLDMTIE----EAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEA 835 + ++ E + T + + F AV +AR L +G+ I L TL + Sbjct: 96 FPNLSVAENIAFTTQLSTRQRLFKFRAVRDIARA--ALDRIGV-QIDLDARVETLPVAQK 152 Query: 836 QRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNL-DV 894 Q V + R L+ + L I+DEPTT L ++++L ++ L+++G ++ + H L +V Sbjct: 153 QLVAICRALASKAQ---LIIMDEPTTALTEKEVRRLQGIIRMLKEEGVAVIFVSHKLAEV 209 Query: 895 IKTADWIVDLGPEGGSGGGEILVSGTPETVAECEASH--TAR 934 ++ ++ +V L G+ + G ++ T R Sbjct: 210 LEVSEKVVVL------RNGKKVAEGPASEFDTQSLTYHMTGR 245 >UniRef50_D1ZX13 C-terminus not complete (Fragment) n=1 Tax=Sordaria macrospora RepID=D1ZX13_SORMA Length = 567 Score = 167 bits (424), Expect = 1e-39, Method: Composition-based stats. Identities = 56/104 (53%), Positives = 80/104 (76%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 63 ++VRGAR +NLKNI++ +PRD +V TG+SGSGKSSLAF TLYAE QRRY+ES++ YAR+ Sbjct: 464 VQVRGARQNNLKNIDVDVPRDAFVVFTGISGSGKSSLAFGTLYAEAQRRYLESVAPYARR 523 Query: 64 FLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDY 107 + P+VD I+GL PA++++Q+ S N RS+VG++T + Sbjct: 524 LIDQAGVPEVDAIDGLPPAVALQQQRGSANARSSVGSVTTLSSL 567 Score = 75.7 bits (185), Expect = 9e-12, Method: Composition-based stats. Identities = 31/104 (29%), Positives = 49/104 (47%), Gaps = 6/104 (5%) Query: 608 NPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATI 667 P +++ GAR NNLK++ + +P F TG+SGSGKS+L TL+ AQR+ + Sbjct: 459 GPPACVQVRGARQNNLKNIDVDVPRDAFVVFTGISGSGKSSLAFGTLYAEAQRRYLESVA 518 Query: 668 AEPAPYRDIQGLEHFDKV------IDIDQSPIGRTPRSNPATYT 705 D G+ D + + + Q RS+ + T Sbjct: 519 PYARRLIDQAGVPEVDAIDGLPPAVALQQQRGSANARSSVGSVT 562 >UniRef50_Q59056 Uncharacterized ABC transporter ATP-binding protein MJ1662 n=13 Tax=Methanococcales RepID=Y1662_METJA Length = 555 Score = 167 bits (424), Expect = 2e-39, Method: Composition-based stats. Identities = 109/524 (20%), Positives = 198/524 (37%), Gaps = 84/524 (16%) Query: 436 IGHAMEFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRI 495 I NN A ++ + E+ + ++ L VGL + + A LSGGE QR+ Sbjct: 93 IRKLYAIRNN---ADEQLPLEEEWEEYEKTAIEILKLVGLEHKKDA-FANILSGGEKQRL 148 Query: 496 RLASQIGA--GLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRD-LGNTVIVVEHDEDAIR 552 L QI + +LDEP+ ++LL + ++RD LG TVI+ H + R Sbjct: 149 ILGRQIAKIYEKGEGVLLLDEPATMACPASKQKLLDVIKNIRDKLGITVIITSHLPEIHR 208 Query: 553 -AADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEVPKKRVPANPEK 611 D +I + G+V +G +E ++ +++ +K++ P KR P + Sbjct: 209 YLCDRLILL------ENGKVKMDGDVEEVLN-------EFL---KKMKPPYKRTPNIKDN 252 Query: 612 VL-----------KLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQR 660 + + G NL++V+ + G I G SG GK+ ++ L + Sbjct: 253 AIIQVRNVSKRYYVVHGGETLNLRNVSFDVKEGEILSIIGPSGVGKTVIMR--LMAGLEL 310 Query: 661 QLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPE 720 G I + + G E + I + + F+ Sbjct: 311 PDEGKIIVDGIDITN-YGWERIELRKRI--------------------GIMHQEFSLPYY 349 Query: 721 SRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKY 780 R A + + + +Y D + +R ++ Sbjct: 350 QTVENLLKYRLGLKGEKAIAHAKAKAEELGLSPKIVDALYQLIDVPESERISK------- 402 Query: 781 KGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKL 840 + + +T + + F V + L + L L + LSGG+ RV + Sbjct: 403 -----LQKMGLTEDIIYKLFPPVVESFEPEEILEALDLGKDILKKKVIELSGGQKVRVAM 457 Query: 841 ARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQ-GNTIVVIEHNLDVI-KTA 898 A +L T + LDEP L ++ + + L + ++ G TIV++ H ++ I + + Sbjct: 458 ALQLI---TKPKILFLDEPFGDLDPITLRDVANYLKIINERFGTTIVLVSHCVEFIKEIS 514 Query: 899 DWIVDLGPEGGSGGGEILVSGTPETVAEC--EASHTARFLKPML 940 D + L +++ G PE V E S+ ARF+K L Sbjct: 515 DRAILLDEN------RLVMEGNPEEVCEEFIRRSN-ARFMKEEL 551 Score = 46.1 bits (108), Expect = 0.008, Method: Composition-based stats. Identities = 23/104 (22%), Positives = 39/104 (37%), Gaps = 18/104 (17%) Query: 623 LKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAEPAPYRDIQGLEHF 682 L V+ G I G SG+GKSTLI R L G+ + + ++F Sbjct: 19 LDKVSFEAKKGEILGIVGKSGAGKSTLI---------RILRGSLDYDEGEVEILGRKDNF 69 Query: 683 DKVIDIDQSPIGRTPRSNPATYTG--VFTPVRELFAGVPESRAR 724 ++ I N A + + +R+L+A + + Sbjct: 70 KEITAIHLQ-------RNFALWAEPVINNIIRKLYAIRNNADEQ 106 >UniRef50_B8F5L6 ABC transporter, ATP-binding protein n=6 Tax=Proteobacteria RepID=B8F5L6_HAEPS Length = 531 Score = 167 bits (422), Expect = 3e-39, Method: Composition-based stats. Identities = 90/457 (19%), Positives = 169/457 (36%), Gaps = 90/457 (19%) Query: 483 SAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLR-DLGNTV 541 SGG+ QRI +A I + + DEP+ L +L + L+ D+G + Sbjct: 153 YPHEFSGGQLQRIMIAMAIINK--PDLLIADEPTTALDVTTQAEILDLMHDLQADMGMAI 210 Query: 542 IVVEHDEDAI-RAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEV 600 I++ HD + + +D V + GE++ G E + P+ + ++ Sbjct: 211 ILISHDLRLVHKYSDDVCVM------QNGEIIERGNTEEVFKNPQHPYTIELLTPIPSDL 264 Query: 601 PKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQR 660 K +V N +++ D+ L + LF GK T + + + I+ Sbjct: 265 -KHQVAENAPQLITTENV------DIDYILKLNLF---------GKPTKVFNAVKNISLE 308 Query: 661 QLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPE 720 G T+ +S +GR A Y G + FA Sbjct: 309 LKVGETLGIVGESGS-------------GKSTLGRAIMQILA-YRG-----KIAFADQEI 349 Query: 721 SRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKY 780 + +K +M V D EI Sbjct: 350 AALSNEQ------------------RQALKKDMQM-----VFQDPFNSLSPRLTVGEIIG 386 Query: 781 KGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKL 840 +G ++H M+ EE R+ + ++TL +V L+ + + SGG+ QR+ + Sbjct: 387 EGLSVH-YPQMSKEERRQ---------KVMKTLEEVNLSPSMINRYPHEFSGGQRQRIAI 436 Query: 841 ARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKL-RDQGNTIVVIEHNLDVIKT-A 898 AR + +LDEPT+ L + ++++L+ L R G + + I H+L V++ + Sbjct: 437 ARAII---LEPKFVLLDEPTSALDRSTQLTVVELLNNLQRKYGLSYIFISHDLAVVRALS 493 Query: 899 DWIVDLGPEGGSGGGEILVSGTPETVAECEAS-HTAR 934 + ++ + GE++ G + + E +T R Sbjct: 494 NRVIVM------SKGEVVEQGEAKQIFEQPKDEYTKR 524 Score = 99.6 bits (247), Expect = 5e-19, Method: Composition-based stats. Identities = 41/162 (25%), Positives = 68/162 (41%), Gaps = 14/162 (8%) Query: 783 KTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLT--YIRLGQSATTLSGGEAQRVKL 840 I E + + A + L L V + ++ SGG+ QR+ + Sbjct: 108 MRIGEQVAEAVSTHNPLLSKQQAHEKALAMLQKVKIPDAEKKMVCYPHEFSGGQLQRIMI 167 Query: 841 ARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKL-RDQGNTIVVIEHNLDVI-KTA 898 A + + L I DEPTT L ++LD++H L D G I++I H+L ++ K + Sbjct: 168 AMAIINK---PDLLIADEPTTALDVTTQAEILDLMHDLQADMGMAIILISHDLRLVHKYS 224 Query: 899 DWIVDLGPEGGSGGGEILVSGTPETVAECEAS-HTARFLKPM 939 D + + GEI+ G E V + +T L P+ Sbjct: 225 DDVCVM------QNGEIIERGNTEEVFKNPQHPYTIELLTPI 260 Score = 95.4 bits (236), Expect = 9e-18, Method: Composition-based stats. Identities = 37/134 (27%), Positives = 61/134 (45%), Gaps = 10/134 (7%) Query: 467 LKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNER 526 +K L V L+ ++R SGG+ QRI +A I L +LDEP+ L + Sbjct: 406 MKTLEEVNLSPSMINRYPHEFSGGQRQRIAIARAII--LEPKFVLLDEPTSALDRSTQLT 463 Query: 527 LLGTLIHL-RDLGNTVIVVEHDEDAIRA-ADHVIDIGPGAGVHGGEVVAEGPLEAIMAVP 584 ++ L +L R G + I + HD +RA ++ VI + GEVV +G + I P Sbjct: 464 VVELLNNLQRKYGLSYIFISHDLAVVRALSNRVIVMSK------GEVVEQGEAKQIFEQP 517 Query: 585 ESLTGQYMSGKRKI 598 + + + + Sbjct: 518 KDEYTKRLIEASNL 531 >UniRef50_C5C220 ABC transporter related n=2 Tax=Actinobacteria (class) RepID=C5C220_BEUC1 Length = 538 Score = 165 bits (418), Expect = 8e-39, Method: Composition-based stats. Identities = 118/553 (21%), Positives = 183/553 (33%), Gaps = 120/553 (21%) Query: 415 RREARHVYVENTPLPAISDMSIGHAMEFFN----------NLKLAGQRAKIAEKILKEIG 464 RR A V + L + + + + +L A E + Sbjct: 63 RRTAGSVRFDGQDLADLDPEELRRLR-WVDLSTVFQSSMNSLNPVITVAAQFEDTFRAHD 121 Query: 465 DRL----------KFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDE 514 +RL + L V L+ TL+ A LSGG QR+ LA + L +LDE Sbjct: 122 ERLSPADLRRRAVEALAMVSLDERTLTSYAHELSGGMRQRVSLALALA--LRPRFVLLDE 179 Query: 515 PSIGLHQRDNERLLGTLIHLR-DLGNTVIVVEHDE-DAIRAADHVIDIGPGAGVHGGEVV 572 P+ GL R+L L L+ DLG V+ V HD + AD ++ + GE+V Sbjct: 180 PTTGLDVLVQRRILDRLRALQADLGFAVLFVTHDIGAVLEMADRMLVMTE------GEIV 233 Query: 573 AEGPLEAIMAVPESLTGQYM---SGKRKIEVPKKRVPA-NPEKVLKLTGARGNNLKDVTL 628 + ++ P Q + + VP + A PE VL++ R Sbjct: 234 EDAAAADVLLRPAHPYTQSLLASYAATRTPVPHRAADAVEPEVVLRVEDVRRRY------ 287 Query: 629 TLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDI 688 V+G G++ L ++ +G A + Sbjct: 288 ------------VTGRGRNRTAVQALDGVSLELRSGKVTA------------------LV 317 Query: 689 DQSPIGRTPRSNPATYTGVFTPVRELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGV 748 QS G++ + R LF V R + Sbjct: 318 GQSGSGKSTIARMVLGVERPDSGRVLFGDVQVDALRRAGLRDY----------------R 361 Query: 749 IKVEMHFLPDIYVPCD-QCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALA 807 V+M F G R L + G T +V D Sbjct: 362 RHVQMVFQDPFASLNPTVPVGAALARPLL--NFGGATRADVRD----------------- 402 Query: 808 RKLQTLMDVGLTY--IRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHF 865 R L VGLT L + LSGG+ QRV +AR L+ + + DEP + L Sbjct: 403 RAAALLEQVGLTPTAHYLERLPHQLSGGQRQRVVIARALA---PDPAILVADEPVSMLDV 459 Query: 866 ADIQQLLDVLHKLR-DQGNTIVVIEHNLDVIKT-ADWIVDLGPEGGSGGGEILVSGTPET 923 + ++L +L L ++ ++ I H+L + AD +V L G ++ G Sbjct: 460 SIRAEILALLASLVAERELAMLYITHDLLSARALADDVVVLSE------GAVVEHGPTAR 513 Query: 924 VAECEASHTARFL 936 V E R L Sbjct: 514 VVEQPEHPYTREL 526 Score = 45.7 bits (107), Expect = 0.008, Method: Composition-based stats. Identities = 23/84 (27%), Positives = 40/84 (47%), Gaps = 3/84 (3%) Query: 616 TGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPI--AQRQLNGATIAEPAPY 673 G + ++DV+L + G F + G SGSGKSTL N L + R+ G+ + Sbjct: 17 DGVPVDAVRDVSLVVDQGEFVGLVGESGSGKSTLGNAILQLLDKPARRTAGSVRFDGQDL 76 Query: 674 RDIQGLEHFDKVIDIDQSPIGRTP 697 D+ E ++ +D S + ++ Sbjct: 77 ADLD-PEELRRLRWVDLSTVFQSS 99 >UniRef50_Q46EN7 Methylcoenzyme M reductase system, component A2 n=4 Tax=Methanosarcinaceae RepID=Q46EN7_METBF Length = 584 Score = 165 bits (417), Expect = 9e-39, Method: Composition-based stats. Identities = 105/544 (19%), Positives = 202/544 (37%), Gaps = 76/544 (13%) Query: 404 RPCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEI 463 P + EG + + ++++ + +I + + N L++ + E + + Sbjct: 70 TPASGIEGEKFLKSVSAIHLQ-RNFGLWNGPAIENVIRKLNYLRVGYESLPRNEYLPHSV 128 Query: 464 GDRLKFLVNVGLNYLTLS-------RSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPS 516 + L + YL L S LSGGE QR+ +A Q+ A + +LDEP Sbjct: 129 DNDYDELFKEAMEYLKLVGLEDKALHSTNFLSGGEKQRVVMARQLAAK--PRILLLDEPV 186 Query: 517 IGLHQRDNERLLGTLIHLRD-LGNTVIVVEHDEDA-IRAADHVIDIGPGAGVHGGEVVAE 574 + +L + L+ L +IVV H + AD +I + G++ A+ Sbjct: 187 TMTGPDTKQEVLDVIKSLKKKLNIPIIVVSHLPEIHAYLADRLIFL------ENGKIAAD 240 Query: 575 GPLEAIMAVPESLTGQYMSGKRKIEVPKKRVPANPEKVLKLTGARGN----------NLK 624 G ++ + M K K+ P+K E +K+ N+K Sbjct: 241 GETSLVLKN----FLRDMKPKEKLAEPEK-----KEVCIKVKDISKRYSLIRMGEVLNIK 291 Query: 625 DVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAEPAPYRDIQGLEHFDK 684 D +L + G G SG+GK+TL+ + + G + + + D Sbjct: 292 DFSLDIYRGEILAFIGSSGAGKTTLM---------KLMEGLVKPKSGTVEYLCNGDWVD- 341 Query: 685 VIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESRARGYTPGRFSFNVRGGRCEACQ 744 + + R + + + F+ S R R S +G A Sbjct: 342 ---VTRYSEKRMELRRIMSI------MNQEFSMSVNSTVREQIRFRLSMKKQGAIEHARS 392 Query: 745 GDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAVP 804 + + L IY D + E E + +++ + + D V Sbjct: 393 KAREMGMSDETLDTIYRLPDMPE------EEKETALRELNLNDTIYFDLFPTIPITD-VD 445 Query: 805 ALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLH 864 A AR + +D+ + L ++ +SGGE R +A L+ T +LDEP L Sbjct: 446 AYARPVFEALDLPME--ILDKTPYQISGGEHVRAFIALSLA---TSPEYLMLDEPFGDLD 500 Query: 865 FADIQQLLDVLHKLRDQ-GNTIVVIEHNLDVI-KTADWIVDLGPEGGSGGGEILVSGTPE 922 ++ + + L ++ ++ G TI ++ H++D + + A + + G + + G P Sbjct: 501 PVTLRDVTNSLKRINERFGTTIALVSHHMDFVREVAHRTILID------NGALAMDGEPA 554 Query: 923 TVAE 926 V + Sbjct: 555 EVCQ 558 Score = 104 bits (260), Expect = 2e-20, Method: Composition-based stats. Identities = 75/327 (22%), Positives = 119/327 (36%), Gaps = 84/327 (25%) Query: 605 VPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNG 664 +N K ++ + L + T+ G ITG SGSGKSTL+ Sbjct: 3 RVSNLVKDYEVRSEKIRVLDHIDFTVEDGEILGITGRSGSGKSTLL-------------- 48 Query: 665 ATIAEPAPYRDIQGLEHFDK-VIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESRA 723 R I+G+E F + +++D I PA+ ++ + + + R Sbjct: 49 ---------RIIRGVEPFQEGTVEVDGKII------TPASGIEGEKFLKSV-SAIHLQRN 92 Query: 724 RGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETL-EIKYKG 782 G G P I + R E+L +Y Sbjct: 93 FGLWNG---------------------------PAIENVIRKLNYLRVGYESLPRNEYLP 125 Query: 783 KTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLAR 842 ++ D +EA E+ L VGL L S LSGGE QRV +AR Sbjct: 126 HSVDNDYDELFKEAMEY-------------LKLVGLEDKAL-HSTNFLSGGEKQRVVMAR 171 Query: 843 ELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQ-GNTIVVIEHNLD-VIKTADW 900 +L+ + + +LDEP T Q++LDV+ L+ + I+V+ H + AD Sbjct: 172 QLAAK---PRILLLDEPVTMTGPDTKQEVLDVIKSLKKKLNIPIIVVSHLPEIHAYLADR 228 Query: 901 IVDLGPEGGSGGGEILVSGTPETVAEC 927 ++ L G+I G V + Sbjct: 229 LIFL------ENGKIAADGETSLVLKN 249 >UniRef50_Q11C74 Oligopeptide/dipeptide ABC transporter, ATPase subunit n=2 Tax=Bacteria RepID=Q11C74_MESSB Length = 691 Score = 162 bits (409), Expect = 9e-38, Method: Composition-based stats. Identities = 112/569 (19%), Positives = 203/569 (35%), Gaps = 95/569 (16%) Query: 421 VYVENTPLPAISDMSIGHAM------EFFNNLKLAGQRAKIAEKILKEIG---------- 464 + + + + D + F + + ++ E+I + I Sbjct: 78 ITIAGHDILTLPDRKLRRLRGPVVSMVFQDPMNALNPSIRVGEQIAEGIRYHTGAGKAEA 137 Query: 465 --DRLKFLVNVGLNY--LTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLH 520 ++ + V L + R LSGG+ QRI +A + L + +LDEP+ GL Sbjct: 138 EARAIELIDQVKLPEPEDIVRRYPHQLSGGQQQRIVIAMALA--LEPALLILDEPTTGLD 195 Query: 521 QRDNERLLGTLIHLRDLGN-TVIVVEHDEDAI-RAADHVIDIGPGAGVHGGEVVAEGPLE 578 +L + ++ N ++ + H+ + R D V ++ G+++ EGP Sbjct: 196 VTTEATILDLITEIKQRSNVALLFISHNLGVVARMCDRV------GVLYAGDLIEEGPTA 249 Query: 579 AIMAVPESLTGQYMSGKRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFT-- 636 ++ P + + + L++ G G +L D+T +P G Sbjct: 250 EVLQRPSHPYTRGLI----------SAVPSIAGELEMVGIPG-SLPDLT-EVPKGCIFRA 297 Query: 637 -CITGVSGSGKSTLINDTLFPIAQRQ-------LNGATIAEPAPYRDIQGLEHFDKVIDI 688 C ++ G++ + +T+ P + L + A R E ++ + Sbjct: 298 RCSIAIAACGEAPVPMETVRPGHASRCLRWRDCLAELNPPQAAAVRAPLDGEKRLEIDSV 357 Query: 689 DQSPIGR------TPRSNPATYTGVFTPVR--ELFAGVPESRARGYTPGRFSFNVRGGRC 740 +S G PR GV +R E A V ES + T GR V G Sbjct: 358 IRSFPGARRLPFLKPRPAVQALRGVSLDIRAGETLAVVGESGSGKSTLGRL---VAGLDR 414 Query: 741 EACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKYKGKTIHEVLD--MTIEEARE 798 A G I+ E D+ + R + +++ + H L+ T+EE Sbjct: 415 PA---GGTIRFEGR---DVTALSRE----RTVDDQRAVQFIFQNPHSALNPHHTVEEIVG 464 Query: 799 F-------FDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQ 851 R ++ L V L + ++ LSGGE QRV +AR + Sbjct: 465 RPLRLYLGLQGTELRRRIVEILRAVRLGERYMTRAPHELSGGEKQRVCIARAFA---AEP 521 Query: 852 TLYILDEPTTGLHFADIQQLLDVLHKLRDQG---NTIVVIEHNLDVIK-TADWIVDLGPE 907 L + DEPT+ L + +L L L+ + + I H+L V++ AD + + Sbjct: 522 RLVVCDEPTSALDISVQAAILQELQTLQRESAHRTAYMFITHDLGVVRQIADRVAVM--- 578 Query: 908 GGSGGGEILVSGTPETVAECEASHTARFL 936 GEI+ G + L Sbjct: 579 ---YLGEIVELGATRDIFSRPQHPYTEAL 604 >UniRef50_Q13ND7 ABC peptide transporter, duplicated ATPase subunits n=4 Tax=Bacteria RepID=Q13ND7_BURXL Length = 571 Score = 160 bits (406), Expect = 2e-37, Method: Composition-based stats. Identities = 104/471 (22%), Positives = 170/471 (36%), Gaps = 70/471 (14%) Query: 484 AETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLR-DLGNTVI 542 LSGG+ QR+ +A + + + DEP+ L +L L LR +L +++ Sbjct: 147 PHELSGGQRQRVMIAMAVACR--PRLLIADEPTTALDVTIQAHILELLDGLRRELSMSLL 204 Query: 543 VVEHDEDAI-RAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVP-ESLTGQYMSGKRKIEV 600 ++ HD + + AD V A + GE V E P+ + P T + + Sbjct: 205 LITHDLGIVAKHADRV------AVMLAGEKVEEAPVARLFTQPQHPYTRGLLGASLNL-- 256 Query: 601 PKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTC---------ITGVSGSGKSTLIN 651 + K+ ++ + K +P + T G S +G++ L+ Sbjct: 257 -ADDLHYRGWKLPEIRHGIDEDGKPSFAVVPRSVRTGNYVADADPAARGAS-AGEAPLLE 314 Query: 652 DTLFPIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPV 711 I Q +G + +Q + V + +S G++ S + Sbjct: 315 LQDLRIDYPQRHGKSTLHAVDGVSLQIARG-ETVGLVGESGCGKSTLSKAI--------L 365 Query: 712 RELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRY 771 R + R RG V G E V+M F P +R Sbjct: 366 RLVPTASGAIRLRGTDL------VPLG--ERELRPLRRHVQMVFQD----PYASLNPRR- 412 Query: 772 NRETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLS 831 T+ E+LD T+ +A AR L VGL LG+ S Sbjct: 413 ------------TVAEILD-TVLVVNGIGNAQQRRARVAAMLDRVGLPGSALGRFPHEFS 459 Query: 832 GGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKL-RDQGNTIVVIEH 890 GG+ QR+ +AR L L I DEP + L + Q+L++L L RD G + I H Sbjct: 460 GGQRQRIGIARALV---LEPDLLICDEPVSALDVSIQAQILNLLVDLKRDLGLAYLFISH 516 Query: 891 NLDVIKT-ADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLKPML 940 +L V++ AD + + G I+ SG + R L + Sbjct: 517 DLSVVRYIADRVHVM------QAGRIVESGHHRDIWRAPQHPYTRTLLEAI 561 Score = 87.3 bits (215), Expect = 3e-15, Method: Composition-based stats. Identities = 44/200 (22%), Positives = 70/200 (35%), Gaps = 28/200 (14%) Query: 413 RLRREAR-HVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDRL---- 467 RL A + + T L + + + + + + + EI D + Sbjct: 366 RLVPTASGAIRLRGTDLVPLGERELRPLRRHVQMVFQDPYASLNPRRTVAEILDTVLVVN 425 Query: 468 -------------KFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDE 514 L VGL L R SGG+ QRI +A + L + + DE Sbjct: 426 GIGNAQQRRARVAAMLDRVGLPGSALGRFPHEFSGGQRQRIGIARALV--LEPDLLICDE 483 Query: 515 PSIGLHQRDNERLLGTLIHL-RDLGNTVIVVEHDEDAIR-AADHVIDIGPGAGVHGGEVV 572 P L ++L L+ L RDLG + + HD +R AD V + G +V Sbjct: 484 PVSALDVSIQAQILNLLVDLKRDLGLAYLFISHDLSVVRYIADRVHVM------QAGRIV 537 Query: 573 AEGPLEAIMAVPESLTGQYM 592 G I P+ + + Sbjct: 538 ESGHHRDIWRAPQHPYTRTL 557 Score = 82.3 bits (202), Expect = 1e-13, Method: Composition-based stats. Identities = 37/148 (25%), Positives = 61/148 (41%), Gaps = 14/148 (9%) Query: 798 EFFDAVPALARKLQTLM--DVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYI 855 E A R ++ L + R+ LSGG+ QRV +A ++ R L I Sbjct: 116 ESLSKAAAWKRAVELLELVQIPDPQRRIFDFPHELSGGQRQRVMIAMAVACR---PRLLI 172 Query: 856 LDEPTTGLHFADIQQLLDVLHKLRDQ-GNTIVVIEHNLDVI-KTADWIVDLGPEGGSGGG 913 DEPTT L +L++L LR + ++++I H+L ++ K AD + + G Sbjct: 173 ADEPTTALDVTIQAHILELLDGLRRELSMSLLLITHDLGIVAKHADRVAVM------LAG 226 Query: 914 EILVSGTPETVAECEAS-HTARFLKPML 940 E + + +T L L Sbjct: 227 EKVEEAPVARLFTQPQHPYTRGLLGASL 254 >UniRef50_A1WJS3 ABC transporter related n=8 Tax=Burkholderiales RepID=A1WJS3_VEREI Length = 555 Score = 160 bits (405), Expect = 3e-37, Method: Composition-based stats. Identities = 98/495 (19%), Positives = 168/495 (33%), Gaps = 67/495 (13%) Query: 439 AMEFFNNLKLAGQRAKIAEKILKEIGDRLKFLVN-------------VGLNYLTLSRSAE 485 L L +L + R +L +GL++L + Sbjct: 83 LRMVLQELGLVPTLTVAENLLLGRLPQRAGWLRRAALHSAARAQLDRIGLHHLDPATPVA 142 Query: 486 TLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVE 545 L G+ Q + +A + + VLDEP+ L R+ L + L G ++ V Sbjct: 143 RLGLGQQQMLEIARNL--QDDTRILVLDEPTAMLTPRETSFLFEQIAQLTARGVAIVYVS 200 Query: 546 HD-EDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEVPKKR 604 H E+ R AD V A + G +V P+ + E Q M G ++ + Sbjct: 201 HRLEELRRVADRV------AVLRDGRLVDLRPMAGL---SEDELVQRMVGHSVSDLEYRP 251 Query: 605 VPANPEKVLKLTG-ARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLN 663 A VL G RG+ ++DV+L L G I G+ GSG++ L+ LF + Sbjct: 252 RRAAGPVVLSAEGLGRGSAVQDVSLQLHAGELLGIAGLVGSGRTELLR-LLFGADRADRG 310 Query: 664 GATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESRA 723 T+ + P + A +S A Sbjct: 311 CITLHPQDRPIPPPIPSAATATSAASTASAAHDGWPAPVAM--------QEMAPPAQSPA 362 Query: 724 RGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKYKGK 783 R TPG FS A G G++ + + +G + + Sbjct: 363 RRQTPGVFS--SPLQAIAA--GLGLVTED-----------RKSQGLLLTQPI-------R 400 Query: 784 TIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARE 843 + D+ + + +G+ Q LSGG Q+V AR Sbjct: 401 INATLSDLGAIARGGWLQRALENRLVQSLVHRLGIRCRNAEQPVGQLSGGNQQKVVFARW 460 Query: 844 LSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNL-DVIKTADWIV 902 L + + +LDEPT G+ +L L ++ +G ++++ +L +++ AD I Sbjct: 461 LHRPC---RVLLLDEPTRGVDVGARAELYRELDRMAAEGRALLMVSSDLRELMTMADRI- 516 Query: 903 DLGPEGGSGGGEILV 917 G G ++ Sbjct: 517 -----GVMRAGRLVA 526 Score = 82.7 bits (203), Expect = 7e-14, Method: Composition-based stats. Identities = 34/161 (21%), Positives = 63/161 (39%), Gaps = 10/161 (6%) Query: 753 MHFLPDIYVPCD----QCKGKRYNRETLEIKYKGKTIHEVLDMT-IEEAREFFDAVPALA 807 M +Y P + G R + L + T+ E L + + + + + Sbjct: 63 MRLAGQVYAPASRRDAERHGLRMVLQELGL-VPTLTVAENLLLGRLPQRAGWLRRAALHS 121 Query: 808 RKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFAD 867 L +GL ++ L G+ Q +++AR L + +LDEPT L + Sbjct: 122 AARAQLDRIGLHHLDPATPVARLGLGQQQMLEIARNL---QDDTRILVLDEPTAMLTPRE 178 Query: 868 IQQLLDVLHKLRDQGNTIVVIEHNLDVI-KTADWIVDLGPE 907 L + + +L +G IV + H L+ + + AD + L Sbjct: 179 TSFLFEQIAQLTARGVAIVYVSHRLEELRRVADRVAVLRDG 219 >UniRef50_C8W139 ABC transporter related n=1 Tax=Desulfotomaculum acetoxidans DSM 771 RepID=C8W139_DESAS Length = 490 Score = 160 bits (404), Expect = 4e-37, Method: Composition-based stats. Identities = 94/507 (18%), Positives = 178/507 (35%), Gaps = 122/507 (24%) Query: 420 HVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEK-----------ILKEIGDRLK 468 VYV + G + + A + + + EI R+K Sbjct: 63 EVYVGGKNAADLQPWEFGKLVGSVFQDPRSQFFAAVVKDEIAFGCENYGILSNEIQIRMK 122 Query: 469 FLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLL 528 L+R TLS GE Q++ +AS A +YV+DEPS L + L+ Sbjct: 123 EAARALQIEPLLARHLLTLSSGEKQKVAVASVQAAK--PTIYVMDEPSANLDMAATKELM 180 Query: 529 GTLIHLRDLGNTVIVVEHDED-AIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESL 587 L L+ G+TVI+ EH + AD V+ + G++ + Sbjct: 181 EVLKKLKAAGSTVIIAEHRLYYLMELADRVVYMK------NGKIECSYTSRQM------- 227 Query: 588 TGQYMSGKRKIEVPKKRVPANPEKVLKLTGARGNN----LKDVTLTLPVGLFTCITGVSG 643 + +S R E+ + + + +TG G ++++ + Sbjct: 228 --KSLSKDRLSEMGLRTTTLSWDVNKIITGLTGEEPVLRVQNLAVK-------------- 271 Query: 644 SGKST--LINDTLFPIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNP 701 +GKS+ L+ D + +P + G K Sbjct: 272 AGKSSGLLLLDV-----------SFCIKPGEILALTGPNGVGKT---------------- 304 Query: 702 ATYTGVFTPVRELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYV 761 T R L V E G+ +N G + Sbjct: 305 -------TLARVLCGLVKE------KSGKILYNGTGVKASR------------------- 332 Query: 762 PCDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYI 821 +C+ + + + + +++ + +MT+ + E L + + L ++ L Sbjct: 333 ---RCRHAWFVMQDTDSQLFSESV--LGEMTLGKKLE----STLLEKAEEILNELDLWEY 383 Query: 822 RLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQ 881 R + +LSGG+ QR+ LA L ++ + ILDEPT+GL ++++++ + Sbjct: 384 R-ERHPASLSGGQKQRLTLAVALMQQT---PVLILDEPTSGLDGRNLERVVQCVKAQAAS 439 Query: 882 GNTIVVIEHNLDVI-KTADWIVDLGPE 907 G +++I H+ +++ K IV L Sbjct: 440 GKAVLIITHDHELVQKVCTRIVYLQKG 466 Score = 111 bits (278), Expect = 1e-22, Method: Composition-based stats. Identities = 72/319 (22%), Positives = 115/319 (36%), Gaps = 112/319 (35%) Query: 623 LKDVTLTLPVGLFTCITGVSGSGKSTL---INDTLFPIAQRQLNGATIAEPAPYRDIQGL 679 L ++LT+ G F +TG SG GK+TL N + + L+G D+Q Sbjct: 18 LSGISLTVRQGEFVVLTGPSGCGKTTLTRLFNGLIPHFYEGTLSGEVYVGGKNAADLQPW 77 Query: 680 EHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESRARGYTPGRFSFNVRGGR 739 E V + Q P RS + FA Sbjct: 78 EFGKLVGSVFQDP-----RS-------------QFFAA---------------------- 97 Query: 740 CEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREF 799 V+K E+ F C+ ++I+ Sbjct: 98 --------VVKDEIAF---------GCENYGILSNEIQIR-------------------- 120 Query: 800 FDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEP 859 + AR LQ L + TLS GE Q+V +A + T+Y++DEP Sbjct: 121 ---MKEAARALQI-------EPLLARHLLTLSSGEKQKVAVASV---QAAKPTIYVMDEP 167 Query: 860 TTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVI-KTADWIVDLGPEGGSGGGEILVS 918 + L A ++L++VL KL+ G+T+++ EH L + + AD +V + G+I Sbjct: 168 SANLDMAATKELMEVLKKLKAAGSTVIIAEHRLYYLMELADRVVYM------KNGKI--- 218 Query: 919 GTPETVAECEASHTARFLK 937 E S+T+R +K Sbjct: 219 ---------ECSYTSRQMK 228 >UniRef50_UPI00019113E5 excinuclease ABC subunit A n=2 Tax=Salmonella enterica subsp. enterica serovar Typhi RepID=UPI00019113E5 Length = 175 Score = 157 bits (397), Expect = 2e-36, Method: Composition-based stats. Identities = 119/160 (74%), Positives = 126/160 (78%), Gaps = 8/160 (5%) Query: 340 SANVHKVVLYGSGKENIEFKYMNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAK 399 SANVHKVVLYGSGKENIEFKYMNDRGDTS+RRHPFEGVLHNMERRYKETESSAVREELAK Sbjct: 2 SANVHKVVLYGSGKENIEFKYMNDRGDTSVRRHPFEGVLHNMERRYKETESSAVREELAK 61 Query: 400 FISNRPCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEK- 458 FISNRPCASCEGTRL REARHV+VENTPLPAISDMSIGHAM+FF NLKL+GQRAKIAEK Sbjct: 62 FISNRPCASCEGTRLNREARHVFVENTPLPAISDMSIGHAMDFFTNLKLSGQRAKIAEKS 121 Query: 459 -------ILKEIGDRLKFLVNVGLNYLTLSRSAETLSGGE 491 R + + L R + S GE Sbjct: 122 AKRDRRSPQVSGERRPELSHALPLGRDAFRRRSPAYSSGE 161 >UniRef50_A1RZ74 ABC transporter related n=1 Tax=Thermofilum pendens Hrk 5 RepID=A1RZ74_THEPD Length = 541 Score = 157 bits (396), Expect = 3e-36, Method: Composition-based stats. Identities = 109/492 (22%), Positives = 179/492 (36%), Gaps = 99/492 (20%) Query: 454 KIAEKILKEIGDR-LKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVL 512 + +E+ +R L L VGL L R+ LSGGE QR+ +AS + + +L Sbjct: 111 EAMGLPPEEVRERTLWALELVGLGAGFLQRNPSQLSGGEKQRVAIASAVAKE--PELLIL 168 Query: 513 DEPSIGLHQRDNERLLGTLIHLR-DLGNTVIVVEHDEDAI-RAADHVIDIGPGAGVHGGE 570 DEP+ L E ++ + LR L T+++VE + D I R AD V+ + G Sbjct: 169 DEPTSDLDPAGKEEVVSAIESLRRQLDVTIVMVEQEPDIIYRFADRVVVLEK------GR 222 Query: 571 VVAEGPLEAIMAVPESLTGQYMSGKRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTL 630 V EG + E L +R+ P ++ +L R L++ +L Sbjct: 223 VALEGTPRELYHRMEEL---------------RRLSLRPPELYEL--CRAAGLREPSLE- 264 Query: 631 PVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAEPAPYRD-IQGLEHFDKVIDID 689 + + + L+G+ EP R ++ + V + Sbjct: 265 ---------------------ELVRLAEKGLLDGSVCGEPRGRRGGLEEVVRVQGVTHVY 303 Query: 690 QSPIGRTPRSNPATYTGVFTPV-------RELFAGVPESRARGYTPGRFSFNVRG----G 738 I Y+G + + A V R T GR R G Sbjct: 304 PGGIRALDNVTLTLYSGELVALMGPNGSGKTTLAKVIAGLVRP-TSGRVLVRGRDVSSYG 362 Query: 739 RCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEARE 798 R E G + P + C Y ++ +G EV ++EA Sbjct: 363 RLELSSIVGYVYQN----PQHQLFCQ----SVYEEVAFGLRLRGAGEGEVRK-AVDEALR 413 Query: 799 FFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDE 858 F+ + + LS GE +R+ LA + ++ I+DE Sbjct: 414 LFN-----------------LEGKAEEHPFFLSKGEKRRLALASVYA---LNPSVLIVDE 453 Query: 859 PTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKT-ADWIVDLGPEGGSGGGEILV 917 PTTG A + L L +L ++G +V I H++D+ AD +V + GG I+ Sbjct: 454 PTTGQDRAFSEYLFSTLRRLAEEGKAVVAITHSVDLASAYADRVVVM------CGGRIVA 507 Query: 918 SGTPETVAECEA 929 G P++V Sbjct: 508 DGEPDSVLADPG 519 Score = 121 bits (304), Expect = 1e-25, Method: Composition-based stats. Identities = 51/168 (30%), Positives = 80/168 (47%), Gaps = 13/168 (7%) Query: 773 RETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSG 832 E EI++ T+ + + +++ EA R L L VGL L ++ + LSG Sbjct: 90 FEDPEIQFVMGTVEDEVALSL-EAMGL-PPEEVRERTLWALELVGLGAGFLQRNPSQLSG 147 Query: 833 GEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQ-GNTIVVIEHN 891 GE QRV +A ++K L ILDEPT+ L A ++++ + LR Q TIV++E Sbjct: 148 GEKQRVAIASAVAKE---PELLILDEPTSDLDPAGKEEVVSAIESLRRQLDVTIVMVEQE 204 Query: 892 LDVI-KTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLKP 938 D+I + AD +V L G + + GTP + L+P Sbjct: 205 PDIIYRFADRVVVL------EKGRVALEGTPRELYHRMEELRRLSLRP 246 Score = 46.5 bits (109), Expect = 0.005, Method: Composition-based stats. Identities = 19/47 (40%), Positives = 26/47 (55%) Query: 614 KLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQR 660 + G+ L V L + G F ITG+SG+GK+TL+ L I QR Sbjct: 12 RYRGSPHYALNGVNLGVEKGEFLAITGLSGAGKTTLVLSILGIIPQR 58 >UniRef50_A7BNZ1 Excinuclease ABC subunit A n=1 Tax=Beggiatoa sp. SS RepID=A7BNZ1_9GAMM Length = 146 Score = 155 bits (392), Expect = 9e-36, Method: Composition-based stats. Identities = 77/146 (52%), Positives = 91/146 (62%), Gaps = 21/146 (14%) Query: 165 TLENLASQGYIRARIDGEVCDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETA 224 LE+L QG+IRA IDGE+ L D P L+ KKHTIEVVVDRFKVRDDL RLAESFET Sbjct: 1 MLESLQKQGFIRALIDGEIVLLDDVPPLDSYKKHTIEVVVDRFKVRDDLQLRLAESFETV 60 Query: 225 LELSGGTAVVADMDDPKA---------------------EELLFSANFACPICGYSMREL 263 L+L G A ++ M + +++FS+NFACP C YS+ EL Sbjct: 61 LKLGEGLAQISLMPEEAKPQKSGVKRHKSGNRQPKKEAISDIIFSSNFACPECNYSLGEL 120 Query: 264 EPRLFSFNNPAGACPTCDGLGVQQYF 289 EP LFSFNNP GACP DGL +Q F Sbjct: 121 EPLLFSFNNPVGACPIRDGLCLQSIF 146 >UniRef50_B1M6V7 ABC transporter related n=45 Tax=Bacteria RepID=B1M6V7_METRJ Length = 585 Score = 153 bits (388), Expect = 2e-35, Method: Composition-based stats. Identities = 92/527 (17%), Positives = 167/527 (31%), Gaps = 96/527 (18%) Query: 417 EARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGD--RLKFLVNVG 474 EA V + I + + + L+ L VG Sbjct: 96 EAELYAVRGRRIAMIFQEPMTALNPLMRIEAQIAEVFAAHGLLTPRTRRSRALELLAEVG 155 Query: 475 LN--YLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLI 532 L + LSGG+ QR+ +A + L + + DEP+ L ++L + Sbjct: 156 LPDPARAAASYPFQLSGGQRQRVMIAMALA--LEPQVLIADEPTTALDVTTQAQILRLIR 213 Query: 533 HLRDL-GNTVIVVEHDEDAI-RAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVP-ESLTG 589 L+ G V+ + HD + AD V A + G +V EG I+ P T Sbjct: 214 DLQARRGMAVMFITHDFGVVAEIADRV------AVMQHGRIVEEGLAADILERPQHPYTA 267 Query: 590 QYMSGKRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTL 649 + ++ +E + P G + G++ KS Sbjct: 268 KLIAAIPDMEAGAGQTARAA---------------------PRGSVLDVEGLT---KSYT 303 Query: 650 INDTLFPIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFT 709 + LF + + + G+ + +S G++ Sbjct: 304 LRGGLFRAPRTVAAVRDVTFTLGRGETLGI--------VGESGSGKSSVGRCLVRLQDPD 355 Query: 710 PVRELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGK 769 R G+ + G +++M F Sbjct: 356 GGRVRLGGIDMAGLSGEAL----------------RQARRRIQMVFQDP----------- 388 Query: 770 RYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAV-PALARKLQTLMDVGLTYIRLGQSAT 828 Y ++ G+ I + + + V AL L VGL + Sbjct: 389 -YGSLNPRVRV-GRAIAD-------GPIAYGEPVGTALKAASALLERVGLDASAADRYPH 439 Query: 829 TLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKL-RDQGNTIVV 887 SGG+ QR+ +AR L+ + + DE + L + Q+LD+L +L R+ +++ Sbjct: 440 EFSGGQRQRIGIARALA---LKPEIIVADEAVSALDVSIQAQILDLLDELKRELHLSLLF 496 Query: 888 IEHNLDV-IKTADWIVDLGPEGGSGGGEILVSGT-PETVAECEASHT 932 I H+L V K D ++ + G ++ G PE + +T Sbjct: 497 ITHDLRVAAKICDRVMVM------EKGAVVEIGPGPEIFSNPREPYT 537 Score = 104 bits (260), Expect = 2e-20, Method: Composition-based stats. Identities = 38/152 (25%), Positives = 63/152 (41%), Gaps = 14/152 (9%) Query: 793 IEEAREFFDAVPALARKLQTLMDVGLTYIR--LGQSATTLSGGEAQRVKLARELSKRGTG 850 + A +R L+ L +VGL LSGG+ QRV +A L+ Sbjct: 131 VFAAHGLLTPRTRRSRALELLAEVGLPDPARAAASYPFQLSGGQRQRVMIAMALA---LE 187 Query: 851 QTLYILDEPTTGLHFADIQQLLDVLHKL-RDQGNTIVVIEHNLDVI-KTADWIVDLGPEG 908 + I DEPTT L Q+L ++ L +G ++ I H+ V+ + AD + + Sbjct: 188 PQVLIADEPTTALDVTTQAQILRLIRDLQARRGMAVMFITHDFGVVAEIADRVAVMQH-- 245 Query: 909 GSGGGEILVSGTPETVAECEAS-HTARFLKPM 939 G I+ G + E +TA+ + + Sbjct: 246 ----GRIVEEGLAADILERPQHPYTAKLIAAI 273 Score = 91.9 bits (227), Expect = 1e-16, Method: Composition-based stats. Identities = 38/158 (24%), Positives = 59/158 (37%), Gaps = 10/158 (6%) Query: 456 AEKILKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEP 515 E + + L VGL+ R SGG+ QRI +A + L + V DE Sbjct: 410 GEPVGTALKAASALLERVGLDASAADRYPHEFSGGQRQRIGIARALA--LKPEIIVADEA 467 Query: 516 SIGLHQRDNERLLGTLIHL-RDLGNTVIVVEHDEDA-IRAADHVIDIGPGAGVHGGEVVA 573 L ++L L L R+L +++ + HD + D V+ + GA VV Sbjct: 468 VSALDVSIQAQILDLLDELKRELHLSLLFITHDLRVAAKICDRVMVMEKGA------VVE 521 Query: 574 EGPLEAIMAVPESLTGQYMSGKRKIEVPKKRVPANPEK 611 GP I + P + + P+ P P Sbjct: 522 IGPGPEIFSNPREPYTRSLVAAIPGRRPRTTPPEAPAS 559 >UniRef50_Q64CK8 Methyl coenzyme M reductase system component A2 homolog n=2 Tax=environmental samples RepID=Q64CK8_9ARCH Length = 572 Score = 152 bits (383), Expect = 8e-35, Method: Composition-based stats. Identities = 88/511 (17%), Positives = 185/511 (36%), Gaps = 73/511 (14%) Query: 436 IGHAMEFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRI 495 I + ++ + + + E E+ + ++++ + LSGG+ QR+ Sbjct: 106 IDNVIKRLRAKQTGFEDVPVFEDEYDELKEEAFKILDLVGLRDKWNHLYTILSGGDKQRV 165 Query: 496 RLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDL-GNTVIVVEHDEDAIR-A 553 LA Q+ + +LDEP + LL ++ ++D ++++V H + Sbjct: 166 LLARQLAKE--PAILLLDEPGTMSDPLTRKYLLESVRRVKDKTDLSILLVSHMPEVHEYL 223 Query: 554 ADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEVPKKRVPANPEKVL 613 D ++ + G++V +G + ++ ++++ ++ P + + ++ Sbjct: 224 CDRLLMMDK------GKIVEDGETKRVID-------KFLTPLEPVK-PLVPIKDEQDTMI 269 Query: 614 KLTGA-------------RGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQR 660 + G R ++D+ + +P G I G S GK+ L+ L ++ Sbjct: 270 WIDGVWKKYDLVTYHTLMRTIEMQDINVKIPRGSIVGIVGPSAMGKTVLMR--LLGGFEK 327 Query: 661 QLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPE 720 G + E+ + I+ RS + + FA P Sbjct: 328 PDGGHILIRIGTVDFANISEYGSRSIE---------ARSK-------LGIIHQEFALPPY 371 Query: 721 SRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKY 780 + R A + + L + D E + Sbjct: 372 QLVQDLFARRIGLKKFEMVKHAMERAEEFGISDVTLDVLLRLAD----------LPEEEA 421 Query: 781 KGKTIHEVLDMTIEEAREFFDAVPALA---RKLQTLMDVGLTYIRLGQSATTLSGGEAQR 837 KG+ + E+ D+ ++ E F PA L V L + + S GE R Sbjct: 422 KGR-LREI-DLDMDLLNELFPIYPATEAFNAAKPYLKAVNLPEEIFSRYISETSVGEEIR 479 Query: 838 VKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKL-RDQGNTIVVIEHNLDVIK 896 + +A ++ + +LDEP + ++ + + L L R+ G T++V+ H LDVI+ Sbjct: 480 LAIASLMASNC---EILLLDEPFGDIDPVSLRMVTNALKDLNREFGTTMLVVSHQLDVIR 536 Query: 897 TADWIVDLGPEGGSGGGEILVSGTPETVAEC 927 L E G +++ G P+ V + Sbjct: 537 ELTHEAMLIDE-----GRLVLRGDPDEVCDT 562 Score = 94.2 bits (233), Expect = 2e-17, Method: Composition-based stats. Identities = 72/321 (22%), Positives = 120/321 (37%), Gaps = 98/321 (30%) Query: 623 LKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAEPAPYRDIQGLEHF 682 L DV+ L G + G+SG+GK+TL+ R ++G E F Sbjct: 26 LDDVSFKLEKGETLGVIGMSGAGKTTLL-----------------------RMLRGYERF 62 Query: 683 DK-VIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESRARGYTPGRFSFNVRGGRCE 741 D+ VI+ID + TP S+ ++ R+L R + S Sbjct: 63 DEGVIEID--SVKVTPDSS-------WSEYRKLREKTAFHLQRSFALYNISV-------- 105 Query: 742 ACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFD 801 D VIK + + K+ E + + F D Sbjct: 106 ---IDNVIK--------------RLRAKQTGFEDVPV--------------------FED 128 Query: 802 AVPAL-ARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPT 860 L + L VGL T LSGG+ QRV LAR+L+K + +LDEP Sbjct: 129 EYDELKEEAFKILDLVGLRDKW-NHLYTILSGGDKQRVLLARQLAKE---PAILLLDEPG 184 Query: 861 TGLHFADIQQLLDVLHKLRDQ-GNTIVVIEHNLD-VIKTADWIVDLGPEGGSGGGEILVS 918 T + LL+ + +++D+ +I+++ H + D ++ + G+I+ Sbjct: 185 TMSDPLTRKYLLESVRRVKDKTDLSILLVSHMPEVHEYLCDRLLMMDK------GKIVED 238 Query: 919 GTPETVAECEASHTARFLKPM 939 G + V + +FL P+ Sbjct: 239 GETKRVID-------KFLTPL 252 >UniRef50_A4FJ61 Peptide ABC transporter, ATP-binding protein n=4 Tax=Actinomycetales RepID=A4FJ61_SACEN Length = 575 Score = 149 bits (376), Expect = 5e-34, Method: Composition-based stats. Identities = 105/489 (21%), Positives = 172/489 (35%), Gaps = 109/489 (22%) Query: 467 LKFLVNVGLNY--LTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDN 524 ++ L V L + R A LSGG+ QR+ +A I A + VLDEP+ GL Sbjct: 131 VELLGQVRLPEPESLVKRYAHQLSGGQQQRVAIAMAIAAR--PKVLVLDEPTTGLDVITQ 188 Query: 525 ERLLGTLIHLR-DLGNTVIVVEHDEDAIRA-ADHVIDIGPGAGVHGGEVVAEGPLEAIMA 582 +L L L +L ++V HD + A ADHV + G V Sbjct: 189 RGILDLLSALAGELSLATVLVSHDLGVVAAMADHVHVL------RAGRTVES-------- 234 Query: 583 VPESLTGQYMSGKRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVS 642 P +R+ + P + + + ++P Sbjct: 235 -----------------APSRRLFSAPAESYT---------RQLLASVPR---------- 258 Query: 643 GSGKSTLINDTLFPIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPA 702 +F ++ P ++ E V+D+D +G R Sbjct: 259 -----------IFDRGLVEVGEDGERHARPRAEVADAEP---VVDLDAVRVGYGKR-TVV 303 Query: 703 TYTGVFTPVRELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVP 762 + + E+ A V ES G + ++ G R A G ++ D+ VP Sbjct: 304 SDVSLQLRRGEVLALVGES---GSGKSTLAASLAGLRAPA---SGRLRYLGETPGDLRVP 357 Query: 763 CDQCKGKRYNRETLEIKY----------KGKTIHEVLDMTIEEAREFFDAVPALARKL-- 810 GKR +++ ++I + ++ F VP R Sbjct: 358 A----GKRPRDLRRKVQLVFQNADTALNPRRSIRD----SVRRPLRLFGIVPRAQRAART 409 Query: 811 -QTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQ 869 + + V L + LSGG+ QRV +AR L+ + I DE TT L + Sbjct: 410 AELIESVRLDAALAERLPAQLSGGQRQRVGIARALA---GAPEVIIADEITTALDVSVQA 466 Query: 870 QLLDVLHKLRDQGN-TIVVIEHNLDVIK-TADWIVDLGPEGGSGGGEILVSGTPETVAEC 927 ++L +L LR + + I H+L V++ AD +V L GE++ G+ E V Sbjct: 467 RVLALLDDLRREHRLACLFISHDLAVVRGMADRVVVLHQ------GEVVEQGSTEAVFAG 520 Query: 928 EASHTARFL 936 R L Sbjct: 521 PNHPYTRAL 529 Score = 91.9 bits (227), Expect = 1e-16, Method: Composition-based stats. Identities = 44/177 (24%), Positives = 69/177 (38%), Gaps = 21/177 (11%) Query: 435 SIGHAMEFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQR 494 S+ + F + A + A+ AE I +V L+ R LSGG+ QR Sbjct: 389 SVRRPLRLFGIVPRAQRAARTAELI-----------ESVRLDAALAERLPAQLSGGQRQR 437 Query: 495 IRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGN-TVIVVEHDEDAIR- 552 + +A + + + DE + L R+L L LR + + HD +R Sbjct: 438 VGIARALAGA--PEVIIADEITTALDVSVQARVLALLDDLRREHRLACLFISHDLAVVRG 495 Query: 553 AADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEVPKKRVPANP 609 AD V+ + H GEVV +G EA+ A P + + P+ A P Sbjct: 496 MADRVVVL------HQGEVVEQGSTEAVFAGPNHPYTRALLDAALEPDPEAAGTAEP 546 Score = 91.9 bits (227), Expect = 1e-16, Method: Composition-based stats. Identities = 42/154 (27%), Positives = 70/154 (45%), Gaps = 16/154 (10%) Query: 793 IEEAR--EFFDAVPALARKLQTLMDVGLTYIR--LGQSATTLSGGEAQRVKLARELSKRG 848 ++EA + A +R ++ L V L + + A LSGG+ QRV +A ++ R Sbjct: 112 LDEALHGQGLTAAARRSRAVELLGQVRLPEPESLVKRYAHQLSGGQQQRVAIAMAIAAR- 170 Query: 849 TGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQ-GNTIVVIEHNLDVI-KTADWIVDLGP 906 + +LDEPTTGL + +LD+L L + V++ H+L V+ AD + L Sbjct: 171 --PKVLVLDEPTTGLDVITQRGILDLLSALAGELSLATVLVSHDLGVVAAMADHVHVL-- 226 Query: 907 EGGSGGGEILVSGTPETVAECEA-SHTARFLKPM 939 G + S + A S+T + L + Sbjct: 227 ----RAGRTVESAPSRRLFSAPAESYTRQLLASV 256 >UniRef50_A7B6V7 Putative uncharacterized protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B6V7_RUMGN Length = 570 Score = 144 bits (364), Expect = 1e-32, Method: Composition-based stats. Identities = 94/487 (19%), Positives = 168/487 (34%), Gaps = 108/487 (22%) Query: 461 KEIGDRLKFLVN---VGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSI 517 KE +R + L++ + + + LSGG QR+ +A + + + DEP+ Sbjct: 105 KEARERAETLLDEVGIQNPGQRMKQYPFELSGGMKQRVAIAIALACN--PDLIIADEPTT 162 Query: 518 GLHQRDNERLLGTLIHLRDLGNT-VIVVEHDEDAIR-AADHVIDIGPGAGVHGGEVVAEG 575 L ++L L + + +T +++V HD I V+ + G +V EG Sbjct: 163 ALDVTVQRQILDLLKKIAEETHTAIVLVSHDLGVIASMCSRVLVMKE------GRIVEEG 216 Query: 576 PLEAIMAVPESLTGQYMSGKRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLF 635 +E I P + +S + E +L+ Sbjct: 217 SMEQIFYEPVHPYTKKLSDMARKLYQVPEKKRTGEVILRTQ------------------- 257 Query: 636 TCITGVSGSGKSTLINDTLFPIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGR 695 G G+S + ++LF ++ ++ + GL + +S G+ Sbjct: 258 -------GLGRS-FVKNSLFGKSRSLEAVEPLSFEIHKGETFGL--------VGESGSGK 301 Query: 696 TPRSNPATYTGVFTPVRELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHF 755 T + T G+ P + G FS C+G K++M F Sbjct: 302 TTLARMLT--GIIPP----------------SCGSFS----------CEG----KIQMIF 329 Query: 756 LPDIYVPCDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMD 815 + +R E L I+ KG R + L Sbjct: 330 QETSASFDPEFSLERILEEPLVIQKKG------------------SKKEREKRVAEMLGL 371 Query: 816 VGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVL 875 V + I + ++ LSGG+ QR+ +AR L L I DE + QLL++L Sbjct: 372 VQMEKIDVRKTTAALSGGQRQRIAVARALL---LNPELLICDESFSSQDILTQSQLLELL 428 Query: 876 HKL-RDQGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECE-ASHTA 933 ++ R + + I H+L V++ G G ++ G + E +T Sbjct: 429 EEIQRKTQLSYLFISHDLQVVRRISQ-----RMGVMYLGSMVEQGLTAEIYEEPWHPYTK 483 Query: 934 RFLKPML 940 L+ ML Sbjct: 484 ELLRAML 490 Score = 68.0 bits (165), Expect = 2e-09, Method: Composition-based stats. Identities = 45/240 (18%), Positives = 84/240 (35%), Gaps = 24/240 (10%) Query: 389 ESSAVREELAKFISNRPCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKL 448 ES + + LA+ ++ SC E + S EF L Sbjct: 296 ESGSGKTTLARMLTGIIPPSCG---------SFSCEGKIQMIFQETSASFDPEFSLERIL 346 Query: 449 AGQRAKIAEKILKEIGDRL-KFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVG 507 + KE R+ + L V + + + ++ LSGG+ QRI +A + L Sbjct: 347 EEPLVIQKKGSKKEREKRVAEMLGLVQMEKIDVRKTTAALSGGQRQRIAVARALL--LNP 404 Query: 508 VMYVLDEPSIGLHQRDNERLLGTLIHL-RDLGNTVIVVEHDEDAIRAADHVIDIGPGAGV 566 + + DE +LL L + R + + + HD +R + + Sbjct: 405 ELLICDESFSSQDILTQSQLLELLEEIQRKTQLSYLFISHDLQVVRRISQRM-----GVM 459 Query: 567 HGGEVVAEGPLEAIMAVP-ESLTGQYMSGKRKIEVPKKRVPANPEKVLKLTGARGNNLKD 625 + G +V +G I P T + + + + + K+ +LK N+ +D Sbjct: 460 YLGSMVEQGLTAEIYEEPWHPYTKELL--RAMLPLDPKKAARQKRLILK---ETRNHSQD 514 >UniRef50_Q11EZ7 ABC transporter related n=16 Tax=Bacteria RepID=Q11EZ7_MESSB Length = 593 Score = 143 bits (361), Expect = 3e-32, Method: Composition-based stats. Identities = 102/528 (19%), Positives = 175/528 (33%), Gaps = 120/528 (22%) Query: 436 IGHAMEFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLT--LSRSAETLSGGEAQ 493 I A+ N+ LA +A L L V + SGG Q Sbjct: 113 IREAIMLHRNVSLAEAKALA-----------LDMLDKVRIPSAAKRYGEIPHQFSGGMRQ 161 Query: 494 RIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDL-GNTVIVVEHDEDAI- 551 R+ +A + + + DEP+ L ++L L LR+ +V+ + HD + Sbjct: 162 RVMIAMALACK--PELIIADEPTTALDVTIQAQILELLRDLREEEDMSVLFITHDMGVVA 219 Query: 552 RAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPE-SLTGQYMSG---------------- 594 AD V+ + G +V E + + P S T + Sbjct: 220 EIADRVMVM------QNGSLVEEAEVRQLFRAPAASYTRTLLEAVPVVGSMAGKDAPEAF 273 Query: 595 -KRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDT 653 +VP PA+ +L + G + + GLF + Sbjct: 274 KASTFKVPPSPRPAHDAPLLDVKGLT------IRFDVRSGLF----------------ER 311 Query: 654 LFPIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRE 713 + N + + G K S IGR T G+ +R Sbjct: 312 VSARVHAVENVSFSIGRGETLALVGESGSGK------STIGR-------TLVGLANCLR- 357 Query: 714 LFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNR 773 E R G G C + + +V+M F + + R Sbjct: 358 -----GEIRVAGEK--------EGSLCRTIE-ERRQRVQMIFQDPYASLDPRLRIGRALT 403 Query: 774 ETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGG 833 E L I+ + E AL + + + V L+ L + SGG Sbjct: 404 EPLRIR------------GVSER-------DALEQAAELMRLVRLSPDMLKRFPHEFSGG 444 Query: 834 EAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQ-GNTIVVIEHNL 892 + QR+ +AR LS + L I DE + L + Q++D++ +L+ + + + I H++ Sbjct: 445 QRQRICIARALSVK---PALLIADEAVSALDVSIKAQIIDLMLELQQELDLSYLFISHDM 501 Query: 893 DVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEAS-HTARFLKPM 939 V++ V + GEI+ G+ V E +T R L+ + Sbjct: 502 AVVERLSHRVAVM-----YLGEIVEMGSRRNVFENPQHPYTRRLLQAV 544 Score = 83.8 bits (206), Expect = 3e-14, Method: Composition-based stats. Identities = 27/150 (18%), Positives = 61/150 (40%), Gaps = 8/150 (5%) Query: 460 LKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGL 519 + + + V L+ L R SGG+ QRI +A + + + + DE L Sbjct: 414 RDALEQAAELMRLVRLSPDMLKRFPHEFSGGQRQRICIARAL--SVKPALLIADEAVSAL 471 Query: 520 HQRDNERLLGTLIHL-RDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLE 578 +++ ++ L ++L + + + HD + H + A ++ GE+V G Sbjct: 472 DVSIKAQIIDLMLELQQELDLSYLFISHDMAVVERLSHRV-----AVMYLGEIVEMGSRR 526 Query: 579 AIMAVPESLTGQYMSGKRKIEVPKKRVPAN 608 + P+ + + + P++R+ + Sbjct: 527 NVFENPQHPYTRRLLQAVPVPDPERRMRRS 556 >UniRef50_D0VX13 Geobacillus stearothermophilus UvrA interaction domain n=2 Tax=Bacteria RepID=D0VX13_BACST Length = 119 Score = 142 bits (359), Expect = 6e-32, Method: Composition-based stats. Identities = 53/111 (47%), Positives = 78/111 (70%) Query: 131 TVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARIDGEVCDLSDPP 190 T+ QMVD +LS PE ++ +LAPI+ +KG H KTLE++ QGY+R RID E+ +L+ Sbjct: 5 TIEQMVDRLLSYPERTKMQILAPIVSGKKGTHAKTLEDIRKQGYVRVRIDREMRELTGDI 64 Query: 191 KLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVADMDDPK 241 +LE KKH+I+VVVDR ++D + RLA+S ETAL+L+ G VV + + + Sbjct: 65 ELEKNKKHSIDVVVDRIIIKDGIAARLADSLETALKLADGKVVVDVIGEGE 115 >UniRef50_C1YHF5 Cobalt transport protein ATP-binding subunit n=1 Tax=Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 RepID=C1YHF5_NOCDA Length = 541 Score = 139 bits (351), Expect = 5e-31, Method: Composition-based stats. Identities = 99/447 (22%), Positives = 147/447 (32%), Gaps = 107/447 (23%) Query: 463 IGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQR 522 I R+ + LSGGE QR+ +A + + + +LDEP+ L Sbjct: 131 IWPRVHEALEAVGFPYGPRHPTGALSGGEKQRLVIAGALA--MRPRLLLLDEPTANLDPA 188 Query: 523 DNERLLGTLIH-LRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIM 581 + G L L + T+++VEH + GG VVA+GP + Sbjct: 189 GAALVRGVLARLLAETEATLVLVEHRVADVVDL----VDRVVVVAPGGGVVADGPPGTVF 244 Query: 582 A-VPESLTGQYMSGKRKIEVPKKRVPANPEKVLKLTGA--------------RGNNLKDV 626 A SL Q + P E +L+ G R + V Sbjct: 245 AEHGRSLAAQGVWVPGHEPAPVLAPAPGGEPLLEAVGVTARTPSQLGVRAAPRRTVFEGV 304 Query: 627 TLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAEPAPYRDIQGLEHFDKVI 686 T+ G T +TG +G+GKSTL+ TL R GA + P + G Sbjct: 305 DATVRAGTATALTGPNGAGKSTLL--TLLAGLSRPHRGAVL----PRGPLAGA------- 351 Query: 687 DIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESRARGYTPGRFSFNVRGGRCEACQGD 746 D P+ R P A + G +F E Sbjct: 352 --DPRPLVRWPARRLARHVGT------VFQHA----------------------EDQFVT 381 Query: 747 GVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAVPAL 806 ++ E+ F P L + EA + Sbjct: 382 ATVRDELRFAP-------------------------------LRAGMGEAETEAWVGELM 410 Query: 807 AR-KLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSK-RGTGQTLYILDEPTTGLH 864 R +L L DV TLSGGE +R+ +A LS +LDEPT G Sbjct: 411 ERLRLSALADV---------HPYTLSGGEKRRLSVATALSSGPAHAPDALVLDEPTFGQD 461 Query: 865 FADIQQLLDVLHKLRDQGNTIVVIEHN 891 +L+++L LR G +V+ H+ Sbjct: 462 TRTWTELVELLATLRSAGRAVVMAPHD 488 Score = 88.5 bits (218), Expect = 1e-15, Method: Composition-based stats. Identities = 64/291 (21%), Positives = 96/291 (32%), Gaps = 92/291 (31%) Query: 601 PKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQR 660 P RV + + +G + L+ V L + G + G SG+GKSTL++ Sbjct: 14 PGARVELSGWGW-RHSGRGSHALRGVDLVIEPGERVLLLGASGAGKSTLLHS-------- 64 Query: 661 QLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPE 720 L G T + A D +G + +D P R+ S L + PE Sbjct: 65 -LAGLTGEDAAISGDHEGT------LLVDGEPADRSRGSV------------GLVSQDPE 105 Query: 721 SRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKY 780 ++ G ++ F P+ R Sbjct: 106 TQLVMARAGD---------------------DVAFGPENLGVAPDLIWPR---------- 134 Query: 781 KGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKL 840 + EA E VG Y LSGGE QR+ + Sbjct: 135 ------------VHEALE----------------AVGFPYGPR-HPTGALSGGEKQRLVI 165 Query: 841 ARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQG-NTIVVIEH 890 A L+ R L +LDEPT L A + VL +L + T+V++EH Sbjct: 166 AGALAMR---PRLLLLDEPTANLDPAGAALVRGVLARLLAETEATLVLVEH 213 Score = 68.0 bits (165), Expect = 1e-09, Method: Composition-based stats. Identities = 42/157 (26%), Positives = 63/157 (40%), Gaps = 13/157 (8%) Query: 415 RREARHV-YVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNV 473 RR ARHV V ++ + F AG E + E+ +RL+ Sbjct: 362 RRLARHVGTVFQHAEDQFVTATVRDELRFAP--LRAGMGEAETEAWVGELMERLRLSAL- 418 Query: 474 GLNYLTLSRSAETLSGGEAQRIRLASQIGAGLV--GVMYVLDEPSIGLHQRDNERLLGTL 531 TLSGGE +R+ +A+ + +G VLDEP+ G R L+ L Sbjct: 419 ------ADVHPYTLSGGEKRRLSVATALSSGPAHAPDALVLDEPTFGQDTRTWTELVELL 472 Query: 532 IHLRDLGNTVIVVEHDEDAIR-AADHVIDIGPGAGVH 567 LR G V++ HD+ + AD + + G V Sbjct: 473 ATLRSAGRAVVMAPHDDLLLPCLADARVRVAGGRAVQ 509 >UniRef50_C9L762 General amino acid ABC transporter, ATP-binding protein n=1 Tax=Blautia hansenii DSM 20583 RepID=C9L762_RUMHA Length = 275 Score = 138 bits (349), Expect = 7e-31, Method: Composition-based stats. Identities = 69/326 (21%), Positives = 124/326 (38%), Gaps = 76/326 (23%) Query: 623 LKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAEPAPYRDIQGLEHF 682 LKD+ +T+ G + G SGSGKST + + G+ I D++ + Sbjct: 17 LKDINVTVNKGDIMVVLGPSGSGKSTFLR--CLNCMEDPTGGSIIFNGVDIADMKVDINI 74 Query: 683 DKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESRARGYTPGRFS-FNVRGGRCE 741 + R G F+ FN + Sbjct: 75 HR-------------------------------------RHMGMVFQHFNLFNNKT---- 93 Query: 742 ACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKYKGKTI-----HEVLDMTIEEA 796 VI+ M + ++V C + + ++ K + E+L +T +A Sbjct: 94 ------VIQNIM--MAPVHVKCQELSQTKRRNFVTKV----KNVFSSQKKELLPITTTKA 141 Query: 797 REFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYIL 856 + A + L L +GL + +TLSGG+ QRV + R L+ + + Sbjct: 142 Q---IRDEAKVQALDLLKRIGL-EDKADVYPSTLSGGQKQRVAIVRSLAM---NPDVILF 194 Query: 857 DEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVI-KTADWIVDLGPEGGSGGGEI 915 DEPT+ L + ++LD++ L +G T++++ H + + A+ I+ + G I Sbjct: 195 DEPTSALDPEMVGEVLDLMKALAKEGMTMIIVTHEMGFAKEVANRILFMDE------GRI 248 Query: 916 LVSGTPETVAECEASHTAR-FLKPML 940 L TP+ E + A+ FL +L Sbjct: 249 LEDSTPKEFFENPKTPRAKEFLSKVL 274 Score = 95.4 bits (236), Expect = 9e-18, Method: Composition-based stats. Identities = 28/142 (19%), Positives = 59/142 (41%), Gaps = 13/142 (9%) Query: 446 LKLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGL 505 L + +A+I ++ + L L +GL TLSGG+ QR+ + + + Sbjct: 134 LPITTTKAQIRDEAKVQ---ALDLLKRIGL-EDKADVYPSTLSGGQKQRVAIVRSLA--M 187 Query: 506 VGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIR-AADHVIDIGPGA 564 + + DEP+ L +L + L G T+I+V H+ + A+ ++ + Sbjct: 188 NPDVILFDEPTSALDPEMVGEVLDLMKALAKEGMTMIIVTHEMGFAKEVANRILFM---- 243 Query: 565 GVHGGEVVAEGPLEAIMAVPES 586 G ++ + + P++ Sbjct: 244 --DEGRILEDSTPKEFFENPKT 263 >UniRef50_A1RW97 ABC transporter related n=1 Tax=Thermofilum pendens Hrk 5 RepID=A1RW97_THEPD Length = 528 Score = 138 bits (347), Expect = 1e-30, Method: Composition-based stats. Identities = 55/201 (27%), Positives = 94/201 (46%), Gaps = 12/201 (5%) Query: 463 IGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQR 522 I R+ L+++ +TLS G Q++ LAS + + +++LDEP+ + R Sbjct: 120 IVARVGELLDLVSLKRYARSEVDTLSTGLKQKLALASVLA--MDPEVFLLDEPTAHIDPR 177 Query: 523 DNERLLGTLIHLRDLGNTVIVVEHDEDAIR-AADHVIDIGPGAGVHG---GEVVAEGPLE 578 + + + L+D G T I+VEH + + AD V+ + G GV GE+V + E Sbjct: 178 TAKEIYALVKRLKDEGKTFILVEHRVEYVAGIADKVLYLEDGRGVLARSIGELVEKVGAE 237 Query: 579 AIMAV-----PESLTGQYMSGKRKIEVPKK-RVPANPEKVLKLTGARGNNLKDVTLTLPV 632 ++ PE L + + R P++ R P L++ L+DV+L Sbjct: 238 KLVDAGVWIPPEYLPRKNPANPRTAGTPRENREPLVDVSSLEVRAGPEVILRDVSLRARR 297 Query: 633 GLFTCITGVSGSGKSTLINDT 653 G T + G +GSGK+TL+ Sbjct: 298 GEVTLVIGPNGSGKTTLLKAI 318 Score = 93.1 bits (230), Expect = 5e-17, Method: Composition-based stats. Identities = 34/144 (23%), Positives = 65/144 (45%), Gaps = 7/144 (4%) Query: 773 RETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSG 832 + E + T+ E + +E E +AR + L V L + TLS Sbjct: 90 FQDPEAQVVMPTVFEEVAFPMENLLE--PPERIVARVGELLDLVSLKRYARSE-VDTLST 146 Query: 833 GEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNL 892 G Q++ LA L+ +++LDEPT + +++ ++ +L+D+G T +++EH + Sbjct: 147 GLKQKLALASVLAM---DPEVFLLDEPTAHIDPRTAKEIYALVKRLKDEGKTFILVEHRV 203 Query: 893 DVIK-TADWIVDLGPEGGSGGGEI 915 + + AD ++ L G I Sbjct: 204 EYVAGIADKVLYLEDGRGVLARSI 227 Score = 65.0 bits (157), Expect = 1e-08, Method: Composition-based stats. Identities = 30/113 (26%), Positives = 50/113 (44%), Gaps = 10/113 (8%) Query: 474 GLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIH 533 GL +L+ R LS GE + + L +Y+LDEP+ GL + + + ++ Sbjct: 385 GLGHLS-DRVVYELSQGEKRLVSFVEMYM--LDKPVYLLDEPTFGLDFKYSLTVARSIAE 441 Query: 534 LRDLGNTVIVVEHDEDAIRAADHVIDIGPGA-GVHGGEVVAEGPLEAIMAVPE 585 L G V+VV HD + + P G+ G +V EG L ++ + Sbjct: 442 LASSGKAVVVVTHDSWILPL------LSPKVYGLSHGRIVFEGELPELLTKSD 488 Score = 63.8 bits (154), Expect = 3e-08, Method: Composition-based stats. Identities = 29/114 (25%), Positives = 49/114 (42%), Gaps = 12/114 (10%) Query: 817 GLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLH 876 GL ++ + LS GE + V + +Y+LDEPT GL F + + Sbjct: 385 GLGHLS-DRVVYELSQGEKRLVSFVE---MYMLDKPVYLLDEPTFGLDFKYSLTVARSIA 440 Query: 877 KLRDQGNTIVVIEHNLDVIKTADWIVDLGPEG-GSGGGEILVSGT-PETVAECE 928 +L G +VV+ H+ ++ L P+ G G I+ G PE + + + Sbjct: 441 ELASSGKAVVVVTHDSWILPL------LSPKVYGLSHGRIVFEGELPELLTKSD 488 >UniRef50_C2BVY8 ABC superfamily ATP binding cassette transporter, ABC protein n=1 Tax=Mobiluncus curtisii ATCC 43063 RepID=C2BVY8_9ACTO Length = 755 Score = 138 bits (347), Expect = 1e-30, Method: Composition-based stats. Identities = 102/494 (20%), Positives = 179/494 (36%), Gaps = 93/494 (18%) Query: 418 ARHV-YVENTPLPAISDMSIGHAMEF-FNNLKLAGQRAKIAEKILKEIGDRL-KFLVNVG 474 AR V YV P A+ S+ + F NL L I R+ + VG Sbjct: 96 ARQVAYVGQNPDAAVITRSVHDDIAFALQNLCLDP----------DTIESRVVQAAAQVG 145 Query: 475 LNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHL 534 L L + TLSGG+ QR+ +A + + + VLDEP+ + + + L Sbjct: 146 LGE-KLHDNPWTLSGGQRQRLAIAVVLA--MRPKLLVLDEPTSTIDSLGSRDFYDLIEQL 202 Query: 535 RDLGNTVIVVEHDED-AIRAADHVIDIGPGAGVHGGEVVAEGPL-EAIMAVPESLTGQYM 592 VIV++HD D + D V+ + GE++A G E + + L + Sbjct: 203 VHQDLGVIVIDHDLDPLLPICDSVLALNEK-----GEIIAAGTPREVFLNHTQELARCGI 257 Query: 593 SGKRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLIND 652 R I K E ++L V + TG S S + Sbjct: 258 WLPRAIRSGCKEALTCSEAGIELPQLNEFCDSQVKYWMRDDSGWHETGESVSAR------ 311 Query: 653 TLFPIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVR 712 P A +LN ++ P + D V I Q+ G++ S + G+ Sbjct: 312 ---PEALLKLNDFSVPRRCPSISAEFAAG-DFVAVIGQNGAGKS--SMLSALAGLL---- 361 Query: 713 ELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYN 772 RF N +G+ + + Sbjct: 362 -----------------RFEGNASVTGIPLKKGNHQVGY---------------VFQNPE 389 Query: 773 RETLEIKY-KGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLS 831 + + K ++ +V D I + F LQ + + Q TLS Sbjct: 390 HQMVAATVRKELSVGKVTDSQINDLLNRF--------HLQAVSE---------QHPLTLS 432 Query: 832 GGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHN 891 GG+ +R+ +A ++++ + + +LDEPT G +A+ +L++ + +L G+ +++ H+ Sbjct: 433 GGQQRRLSVATMVAEQ---RKVIVLDEPTYGQDWANTCELMEFIQQLCSTGHLVIMATHD 489 Query: 892 LDVI-KTADWIVDL 904 L++ K I+ L Sbjct: 490 LELAKKYCSHIIAL 503 Score = 131 bits (331), Expect = 1e-28, Method: Composition-based stats. Identities = 53/194 (27%), Positives = 87/194 (44%), Gaps = 22/194 (11%) Query: 754 HFLPDIYVPCDQCKGKRYNRETLE-----IKYKGKTI-HEVLDMTIEEAREF------FD 801 H LP Y C + G + ++E + Y G+ V+ ++ + F D Sbjct: 70 HCLPSEYSGCVELCGTQIADASVEFIARQVAYVGQNPDAAVITRSVHDDIAFALQNLCLD 129 Query: 802 AVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTT 861 +R +Q VGL L + TLSGG+ QR+ +A L+ R L +LDEPT+ Sbjct: 130 PDTIESRVVQAAAQVGLGEK-LHDNPWTLSGGQRQRLAIAVVLAMR---PKLLVLDEPTS 185 Query: 862 GLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDV-IKTADWIVDLGPEGGSGGGEILVSGT 920 + + D++ +L Q ++VI+H+LD + D ++ L + GEI+ +GT Sbjct: 186 TIDSLGSRDFYDLIEQLVHQDLGVIVIDHDLDPLLPICDSVLALNEK-----GEIIAAGT 240 Query: 921 PETVAECEASHTAR 934 P V AR Sbjct: 241 PREVFLNHTQELAR 254 Score = 66.9 bits (162), Expect = 3e-09, Method: Composition-based stats. Identities = 33/182 (18%), Positives = 68/182 (37%), Gaps = 11/182 (6%) Query: 414 LRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIG------DRL 467 L A + E +++ + + + + +A + KE+ ++ Sbjct: 354 LSALAGLLRFEGN--ASVTGIPLKKGNHQVGYVFQNPEHQMVAATVRKELSVGKVTDSQI 411 Query: 468 KFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERL 527 L+N + TLSGG+ +R+ +A+ + + VLDEP+ G + L Sbjct: 412 NDLLNRFHLQAVSEQHPLTLSGGQQRRLSVATMVAEQRK--VIVLDEPTYGQDWANTCEL 469 Query: 528 LGTLIHLRDLGNTVIVVEHDEDAI-RAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPES 586 + + L G+ VI+ HD + + H+I + V + + + Sbjct: 470 MEFIQQLCSTGHLVIMATHDLELAKKYCSHIIALPFSPQVTAPAALPQHETRGLFDSFNP 529 Query: 587 LT 588 LT Sbjct: 530 LT 531 Score = 46.1 bits (108), Expect = 0.007, Method: Composition-based stats. Identities = 25/107 (23%), Positives = 39/107 (36%), Gaps = 14/107 (13%) Query: 610 EKVLKLTGARGN-------NLKDVTLTLPVGLFTCITGVSGSGKSTLINDT--LFPIAQR 660 ++ LK+ G + L DV L+ G + G SG GK+TLI L P Sbjct: 14 KESLKVRGLSVHYYGQEKWVLSDVDLSYLEGQVCAVIGPSGCGKTTLIRTICGLIPHCLP 73 Query: 661 QLNGATIAEPAPYRDIQGLEHFDK-VIDIDQSP----IGRTPRSNPA 702 + +E + V + Q+P I R+ + A Sbjct: 74 SEYSGCVELCGTQIADASVEFIARQVAYVGQNPDAAVITRSVHDDIA 120 >UniRef50_A9CLQ7 ABC transporter, nucleotide binding/ATPase protein (Oligopeptide) n=4 Tax=Proteobacteria RepID=A9CLQ7_AGRT5 Length = 539 Score = 136 bits (344), Expect = 3e-30, Method: Composition-based stats. Identities = 52/246 (21%), Positives = 90/246 (36%), Gaps = 26/246 (10%) Query: 423 VENTPLPAISDMSIGHAMEFF-------NNLKLAGQRAKIAEKILKEIGDRLKFLVNVGL 475 V + I + H + L+ G + A+ + R+ Sbjct: 89 VNGRLIAMIFQDPLSHLNPVYTVGWQMREALRTHGIDNRQAQVEALRLFKRVALPE---- 144 Query: 476 NYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHL- 534 + + SGG+ QR+ +A + L + + DEP+ L +L L L Sbjct: 145 PEKAVDKYPHEFSGGQRQRVMIAMALA--LKPNLLIADEPTTALDVTVQAEVLALLKELQ 202 Query: 535 RDLGNTVIVVEHDEDAI-RAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMS 593 R+ G V+++ HD + AD V+ + G +V G + + P+ + + Sbjct: 203 RETGMGVLIITHDLGVVSEVADRVVVMEKGV------LVESGTVREVYRNPQHPYTKKLI 256 Query: 594 GKRKIEVPKKRVPANPEKVLKLTGARG-----NNLKDVTLTLPVGLFTCITGVSGSGKST 648 + + E +LK+ AR LK ++ L G + G SGSGKST Sbjct: 257 AAAPGKGQLHEPSTDGEPILKVRNARKSYGGFEALKGISFDLKAGETVAVVGESGSGKST 316 Query: 649 LINDTL 654 L L Sbjct: 317 LARILL 322 Score = 113 bits (282), Expect = 4e-23, Method: Composition-based stats. Identities = 37/141 (26%), Positives = 65/141 (46%), Gaps = 11/141 (7%) Query: 798 EFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILD 857 E AR + L VGL+ +G+ SGG+ QR+ +AR L+ L + D Sbjct: 384 EILPKAKWRARAAELLERVGLSPEHMGRYPHQFSGGQRQRIAIARALA---LEPQLIVCD 440 Query: 858 EPTTGLHFADIQQLLDVLHKLRDQ-GNTIVVIEHNLDVIK-TADWIVDLGPEGGSGGGEI 915 E + L + Q++ +L KLR + G + I H+L +++ AD+++ + GE+ Sbjct: 441 EAVSALDVSVQAQVVRLLDKLRREMGIAFIFIAHDLPLVRDFADYVMVMQK------GEV 494 Query: 916 LVSGTPETVAECEASHTARFL 936 + GT V + + L Sbjct: 495 VEFGTVAQVFDNPQQRYTQAL 515 Score = 102 bits (255), Expect = 6e-20, Method: Composition-based stats. Identities = 39/140 (27%), Positives = 61/140 (43%), Gaps = 13/140 (9%) Query: 801 DAVPALARKLQTLMDVGLTYIR--LGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDE 858 D A L+ V L + + SGG+ QRV +A L+ L I DE Sbjct: 125 DNRQAQVEALRLFKRVALPEPEKAVDKYPHEFSGGQRQRVMIAMALA---LKPNLLIADE 181 Query: 859 PTTGLHFADIQQLLDVLHKL-RDQGNTIVVIEHNLDVI-KTADWIVDLGPEGGSGGGEIL 916 PTT L ++L +L +L R+ G +++I H+L V+ + AD +V + G ++ Sbjct: 182 PTTALDVTVQAEVLALLKELQRETGMGVLIITHDLGVVSEVADRVVVM------EKGVLV 235 Query: 917 VSGTPETVAECEASHTARFL 936 SGT V + L Sbjct: 236 ESGTVREVYRNPQHPYTKKL 255 Score = 90.8 bits (224), Expect = 3e-16, Method: Composition-based stats. Identities = 41/175 (23%), Positives = 71/175 (40%), Gaps = 13/175 (7%) Query: 447 KLAGQRAKIAEKILKEIGDRLKF---LVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGA 503 +L + I +IL + R + L VGL+ + R SGG+ QRI +A + Sbjct: 373 QLISEAWVIHPEILPKAKWRARAAELLERVGLSPEHMGRYPHQFSGGQRQRIAIARALA- 431 Query: 504 GLVGVMYVLDEPSIGLHQRDNERLLGTLIHL-RDLGNTVIVVEHDEDAIR-AADHVIDIG 561 L + V DE L +++ L L R++G I + HD +R AD+V+ + Sbjct: 432 -LEPQLIVCDEAVSALDVSVQAQVVRLLDKLRREMGIAFIFIAHDLPLVRDFADYVMVM- 489 Query: 562 PGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEVPKKRVPANPEKVLKLT 616 GEVV G + + P+ Q + P + ++ ++ Sbjct: 490 -----QKGEVVEFGTVAQVFDNPQQRYTQALISATLDPDPDVQAANRNARLASIS 539 >UniRef50_A1A209 Cobalt import ATP-binding/permease protein cbiO n=5 Tax=Bacteria RepID=A1A209_BIFAA Length = 775 Score = 136 bits (342), Expect = 4e-30, Method: Composition-based stats. Identities = 58/271 (21%), Positives = 109/271 (40%), Gaps = 24/271 (8%) Query: 461 KEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLH 520 EIG R+ ++ + + +SGG+ QRI +A + + + VLDEP+ L Sbjct: 124 DEIGLRISGSLDAVDMSDYRASNPTRMSGGQQQRIAIAGMLA--MDSDVLVLDEPTAMLD 181 Query: 521 QRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAI 580 + ++ L L+D G T+I+V H D + AD VI + G +V +GP + Sbjct: 182 PQGRADIMRVLDELQDRGTTIILVTHHADELEHADRVIQL------EAGHIVGDGPADER 235 Query: 581 MAVPESLTGQYMSGKRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITG 640 + +P G KR + + + + + A + ++ ++ G + G Sbjct: 236 LRMPVQSVG---LPKRIDDESAETLIEARDISYRYVDAERDVFNHLSFSIGKGETVALMG 292 Query: 641 VSGSGKSTLINDTLFPIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSN 700 +G+GK+TL + ++ G+ + + + P+ R R+ Sbjct: 293 RNGAGKTTLAR--MLCALEKPTTGSIVIDGIAVATAKANGG--------TKPLNRKNRTR 342 Query: 701 PATYTG--VFTPVRELFAGVPESRARGYTPG 729 G + P R+LFA + Y P Sbjct: 343 LRRTVGYVMQHPERQLFADT-VAEDVAYGPS 372 Score = 104 bits (260), Expect = 2e-20, Method: Composition-based stats. Identities = 29/98 (29%), Positives = 52/98 (53%), Gaps = 9/98 (9%) Query: 826 SATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTI 885 + T +SGG+ QR+ +A L+ + +LDEPT L ++ VL +L+D+G TI Sbjct: 146 NPTRMSGGQQQRIAIAGMLAM---DSDVLVLDEPTAMLDPQGRADIMRVLDELQDRGTTI 202 Query: 886 VVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPET 923 +++ H+ D ++ AD ++ L G I+ G + Sbjct: 203 ILVTHHADELEHADRVIQL------EAGHIVGDGPADE 234 Score = 96.2 bits (238), Expect = 6e-18, Method: Composition-based stats. Identities = 35/130 (26%), Positives = 63/130 (48%), Gaps = 5/130 (3%) Query: 800 FDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEP 859 D A+ R +Q + + + ++R +S LSGG+ + V +A ++ ILDEP Sbjct: 376 LDTSEAMERAMQAMRLLHIEHLR-DRSPFDLSGGQQRLVAIAGVIA---CEPKALILDEP 431 Query: 860 TTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVI-KTADWIVDLGPEGGSGGGEILVS 918 T GL ++ ++H+L+ +G TI++I H+ D + + AD + LG + Sbjct: 432 TAGLDEEAAARVHGLIHELKSRGVTILLISHSQDEVDELADRTIMLGKPAKRADSKESTE 491 Query: 919 GTPETVAECE 928 T + E E Sbjct: 492 STVKATCEAE 501 Score = 87.7 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 46/197 (23%), Positives = 84/197 (42%), Gaps = 17/197 (8%) Query: 412 TRLRREARHVYVENTPLPAISDMSIGHAMEF-FNNLKLAGQRAKIAEKILKEIGDRLKFL 470 TRLRR YV P + ++ + + +NL L A + ++ + Sbjct: 341 TRLRRTV--GYVMQHPERQLFADTVAEDVAYGPSNLGLDTSEA---------MERAMQAM 389 Query: 471 VNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGT 530 + + +L RS LSGG+ + + +A I +LDEP+ GL + R+ G Sbjct: 390 RLLHIEHL-RDRSPFDLSGGQQRLVAIAGVIACE--PKALILDEPTAGLDEEAAARVHGL 446 Query: 531 LIHLRDLGNTVIVVEHDEDAIR-AADHVIDIGPGAGVHGGEVVAEGPLEAI-MAVPESLT 588 + L+ G T++++ H +D + AD I +G A + E ++A A P++ Sbjct: 447 IHELKSRGVTILLISHSQDEVDELADRTIMLGKPAKRADSKESTESTVKATCEAEPDAEP 506 Query: 589 GQYMSGKRKIEVPKKRV 605 +G V ++R Sbjct: 507 SVDAAGSDTATVGERRT 523 >UniRef50_UPI0001C36863 ABC transporter, ATP-binding protein n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C36863 Length = 462 Score = 135 bits (341), Expect = 6e-30, Method: Composition-based stats. Identities = 57/245 (23%), Positives = 99/245 (40%), Gaps = 35/245 (14%) Query: 430 AISDMSIGHAMEFFNNLKLAGQRAKIAEKILKE--------------IGDRLKFLVNVGL 475 I+ M+ ++ + + +++ E I +R + Sbjct: 70 DITGMTAWEIGTIVGSVFQNPKSQFFSSELVGEVAFGCENHGFSREAIQERTDKSIETFS 129 Query: 476 NYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLR 535 L R + LS GE QR+ +AS + ++V DEP+ L E+LLGTL L+ Sbjct: 130 LSLIRKRPLDVLSSGEKQRVAIASVYA--MRPKVFVCDEPTANLDLGGIEQLLGTLFKLK 187 Query: 536 DLGNTVIVVEHDEDAI-RAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSG 594 G T+++ EH + AD +I + G +V E + A+PE + G Sbjct: 188 AQGYTLVIAEHRLSWLSELADRIIYMEK------GRIVREYTPKEFTAMPE--MERRNKG 239 Query: 595 KRKIEVPKKRVPANPEKVLKLTGARGNNL----------KDVTLTLPVGLFTCITGVSGS 644 R + + R P K+ + ++L +++ P G T +TG +G+ Sbjct: 240 LRTMHRVQTREPLPLPKLFERGSLIMHDLCKKCGEIEVFTNLSGAFPQGSITAVTGRNGA 299 Query: 645 GKSTL 649 GKSTL Sbjct: 300 GKSTL 304 Score = 107 bits (268), Expect = 2e-21, Method: Composition-based stats. Identities = 64/306 (20%), Positives = 99/306 (32%), Gaps = 94/306 (30%) Query: 625 DVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAEPAPYRDIQGLEHFDK 684 +V L++ G +TGVSG GK T + + +A G+ Sbjct: 20 NVNLSIAQGECVVLTGVSGCGK-TTLTRLMNGLAPSYFKGS----------------ISG 62 Query: 685 VIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESRARGYTPGRFSFNVRGGRCEACQ 744 I ID I T G +F FS + G Sbjct: 63 SICIDDRDITGMTAWEIGTIVG------SVFQNP--------KSQFFSSELVG------- 101 Query: 745 GDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAVP 804 ++ C+ R EA + Sbjct: 102 -------------EVAFGCENHGFSR------------------------EAIQ------ 118 Query: 805 ALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLH 864 R +++ L+ + + LS GE QRV +A + R +++ DEPT L Sbjct: 119 --ERTDKSIETFSLS-LIRKRPLDVLSSGEKQRVAIASVYAMR---PKVFVCDEPTANLD 172 Query: 865 FADIQQLLDVLHKLRDQGNTIVVIEHNLDVI-KTADWIVDLGPEGGSGGGEILVSGTPET 923 I+QLL L KL+ QG T+V+ EH L + + AD I+ + G I+ TP+ Sbjct: 173 LGGIEQLLGTLFKLKAQGYTLVIAEHRLSWLSELADRIIYM------EKGRIVREYTPKE 226 Query: 924 VAECEA 929 Sbjct: 227 FTAMPE 232 Score = 100 bits (248), Expect = 4e-19, Method: Composition-based stats. Identities = 27/99 (27%), Positives = 52/99 (52%), Gaps = 4/99 (4%) Query: 802 AVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTT 861 + + R Q L ++ L Y LSGG+ QR+ +A + + + + +LDEPT+ Sbjct: 362 SEERMERARQLLKNMNL-YEYRDVHPAALSGGQKQRLAVACAI---FSEREILLLDEPTS 417 Query: 862 GLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADW 900 GL A+++++ D L +G T++VI H+ + ++ Sbjct: 418 GLDGANMRRISDALKAAASRGKTVIVITHDPEFMEECCQ 456 Score = 84.2 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 27/100 (27%), Positives = 45/100 (45%), Gaps = 2/100 (2%) Query: 457 EKILKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPS 516 + + +E +R + L+ Y LSGG+ QR+ +A I + + +LDEP+ Sbjct: 359 QPLSEERMERARQLLKNMNLYEYRDVHPAALSGGQKQRLAVACAIFSER--EILLLDEPT 416 Query: 517 IGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADH 556 GL + R+ L G TVIV+ HD + + Sbjct: 417 SGLDGANMRRISDALKAAASRGKTVIVITHDPEFMEECCQ 456 >UniRef50_Q0W8J4 Putative ABC-type cobalt import system, ATPase component n=1 Tax=uncultured methanogenic archaeon RC-I RepID=Q0W8J4_UNCMA Length = 506 Score = 134 bits (337), Expect = 2e-29, Method: Composition-based stats. Identities = 54/268 (20%), Positives = 96/268 (35%), Gaps = 33/268 (12%) Query: 399 KFISNRPCASCEG-TR---LRREARHV-YVENTPLPAISDMSIGHAMEF-FNNLKLAGQR 452 C TR L A V V+ P + +++ + F NL L + Sbjct: 67 DGRMEGLAEVCGKNTRDVPLAEMATMVGLVQQDPEAQLCTLTVEDEVAFGPENLGLPPE- 125 Query: 453 AKIAEKILKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVL 512 E+ R + + + + LSGGE QR+ +AS + + + +L Sbjct: 126 ---------EVRRRTETSLAMAEASHLRNNCIFELSGGEKQRVAIASMLA--MSPGVLIL 174 Query: 513 DEPSIGLHQRDNERLLGTLIHLRDL-GNTVIVVEHDED-AIRAADHVIDIGPGAGVHGGE 570 DEP+ L + + L++ T++V+EH D AD +I + G+ Sbjct: 175 DEPTSSLDPEATTDIFHAIRRLKERENMTILVIEHKLDRVAGLADRMIVMER------GK 228 Query: 571 VVAEGPLEAIMAVPESLTGQYMSGKRKIEVPKKRVPANPEKVLKLTGAR-----GNNLKD 625 V+ +G EA + + + E+ +++ G L+ Sbjct: 229 VIFDGEPEA--TARRYIDRIRAGTPAQASGKRVDATDRQEETIRVEGLHFGYDGREVLRG 286 Query: 626 VTLTLPVGLFTCITGVSGSGKSTLINDT 653 V G I G +GSGK+T + Sbjct: 287 VDFAARRGEIVGIMGRNGSGKTTFLGHI 314 Score = 116 bits (291), Expect = 4e-24, Method: Composition-based stats. Identities = 71/309 (22%), Positives = 106/309 (34%), Gaps = 103/309 (33%) Query: 623 LKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAEPAPYRDIQGLEHF 682 + DV+L + G ITG SG GKSTL G I R ++GL Sbjct: 28 IDDVSLDIRHGEVVVITGPSGCGKSTLALAI----------GGFIPHVIDGR-MEGLAEV 76 Query: 683 DKVIDIDQSPIGRTPRSNP----ATYTGVFTPVRELFAGVPESRARGYTPGRFSFNVRGG 738 G+ R P AT G L PE++ T Sbjct: 77 ----------CGKNTRDVPLAEMATMVG-------LVQQDPEAQLCTLT----------- 108 Query: 739 RCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEARE 798 ++ E+ F P E L + EE Sbjct: 109 ----------VEDEVAFGP-----------------------------ENLGLPPEE--- 126 Query: 799 FFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDE 858 + R+ +T + + LSGGE QRV +A L+ + ILDE Sbjct: 127 -------VRRRTETSLAMAEASHLRNNCIFELSGGEKQRVAIASMLAM---SPGVLILDE 176 Query: 859 PTTGLHFADIQQLLDVLHKLRD-QGNTIVVIEHNLDVIK-TADWIVDLGPEGGSGGGEIL 916 PT+ L + + +L++ + TI+VIEH LD + AD ++ + G+++ Sbjct: 177 PTSSLDPEATTDIFHAIRRLKERENMTILVIEHKLDRVAGLADRMIVMER------GKVI 230 Query: 917 VSGTPETVA 925 G PE A Sbjct: 231 FDGEPEATA 239 Score = 78.8 bits (193), Expect = 1e-12, Method: Composition-based stats. Identities = 33/144 (22%), Positives = 58/144 (40%), Gaps = 15/144 (10%) Query: 786 HEVLDMTIEEAREF----FDAVPALAR-KLQTLMDVGLTYIRLGQSATTLSGGEAQRVKL 840 H++ + T+ F F R + ++D + LS GE +R+ L Sbjct: 353 HQIFERTVRAEAGFACRNFGYPAEKERIAVNAVLDRYDLSRYSDRHPLKLSFGEKRRLNL 412 Query: 841 ARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVI-KTAD 899 + L + ILDEP G + ++ L +L +G T++ + H+ DV + D Sbjct: 413 SSVL---PYDPQVLILDEPLVGQDLVNAARMTKDLRELSAEGKTVIFVTHDADVAYQCCD 469 Query: 900 WIVDLGPEGGSGGGEILVSGTPET 923 IV G+I+V+ P Sbjct: 470 RIVFFNE------GQIIVNDRPGE 487 Score = 73.8 bits (180), Expect = 3e-11, Method: Composition-based stats. Identities = 33/117 (28%), Positives = 50/117 (42%), Gaps = 8/117 (6%) Query: 479 TLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLG 538 R LS GE +R+ L+S + + +LDEP +G + R+ L L G Sbjct: 394 YSDRHPLKLSFGEKRRLNLSSVL--PYDPQVLILDEPLVGQDLVNAARMTKDLRELSAEG 451 Query: 539 NTVIVVEHDEDA-IRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSG 594 TVI V HD D + D ++ G +V + P EA A+ + Y+ G Sbjct: 452 KTVIFVTHDADVAYQCCDRIVFFNEGQI-----IVNDRPGEAFRALSKLGFTDYLPG 503 Score = 43.8 bits (102), Expect = 0.031, Method: Composition-based stats. Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 12/46 (26%) Query: 9 ARTHNLK------------NINLVIPRDKLIVVTGLSGSGKSSLAF 42 R NLK +++L I +++V+TG SG GKS+LA Sbjct: 11 IRLKNLKFWFPESDSPVIDDVSLDIRHGEVVVITGPSGCGKSTLAL 56 >UniRef50_A2BMZ6 Oligopeptide transport ATP-binding protein n=35 Tax=cellular organisms RepID=A2BMZ6_HYPBU Length = 329 Score = 133 bits (336), Expect = 2e-29, Method: Composition-based stats. Identities = 75/320 (23%), Positives = 112/320 (35%), Gaps = 89/320 (27%) Query: 623 LKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAEPAPYRDIQGLEHF 682 +++V+ TL G I G SG GKSTL L + P P R ++G Sbjct: 24 VENVSFTLEPGEVLGIAGESGCGKSTLAWSLLRLV------------PPPGRIVKGS--- 68 Query: 683 DKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESRARGYTPGRFSFNVRGGRCEA 742 I ID I VR +R R Sbjct: 69 ---IIIDGQDIVNMSE----------DEVR--------ARIRWQ---------------- 91 Query: 743 CQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDA 802 K+ M F + E + +H MT E+A Sbjct: 92 -------KISMVF-------QGAMNALNPMYKVWEQIAEPLIVH--RGMTKEQAY----- 130 Query: 803 VPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTG 862 R ++ L VGL + LSGG+ QRV +A L + I DEPTT Sbjct: 131 ----RRAVEVLKLVGLGEDIANRYPHELSGGQKQRVVIAMALV---LDPPILIADEPTTA 183 Query: 863 LHFADIQQLLDVLHKLRDQ-GNTIVVIEHNLDVI-KTADWIVDLGPEGGSGGGEILVSGT 920 L Q+L++L +L+++ +I+ I H+L VI + AD I + G+I+ G Sbjct: 184 LDTIIQAQILNLLKQLKNELNMSIIFITHDLSVIAEMADKIAIM------YAGQIVEYGP 237 Query: 921 PETVAECEAS-HTARFLKPM 939 E + +T L+ + Sbjct: 238 SEEIFNNPQHPYTRALLRAI 257 Score = 104 bits (260), Expect = 2e-20, Method: Composition-based stats. Identities = 38/144 (26%), Positives = 65/144 (45%), Gaps = 11/144 (7%) Query: 464 GDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRD 523 ++ L VGL +R LSGG+ QR+ +A + L + + DEP+ L Sbjct: 131 RRAVEVLKLVGLGEDIANRYPHELSGGQKQRVVIAMALV--LDPPILIADEPTTALDTII 188 Query: 524 NERLLGTLIHLR-DLGNTVIVVEHDEDAI-RAADHVIDIGPGAGVHGGEVVAEGPLEAIM 581 ++L L L+ +L ++I + HD I AD + A ++ G++V GP E I Sbjct: 189 QAQILNLLKQLKNELNMSIIFITHDLSVIAEMADKI------AIMYAGQIVEYGPSEEIF 242 Query: 582 AVP-ESLTGQYMSGKRKIEVPKKR 604 P T + ++ PK++ Sbjct: 243 NNPQHPYTRALLRAIPRLRGPKEK 266 >UniRef50_C8W1V3 ABC transporter related n=1 Tax=Desulfotomaculum acetoxidans DSM 771 RepID=C8W1V3_DESAS Length = 255 Score = 133 bits (336), Expect = 2e-29, Method: Composition-based stats. Identities = 54/159 (33%), Positives = 78/159 (49%), Gaps = 16/159 (10%) Query: 777 EIKYKGKTIHEVLDMTIEEAREFFDAVPALA--RKLQ----TLMDVGLTYIRLGQSATTL 830 +I Y + D+T+EE F+ V L+ RKLQ + VGL RLGQ +L Sbjct: 78 KIGYMSQKFSLYDDLTVEENMNFYAGVYNLSGQRKLQQKQKIIELVGLKE-RLGQLVQSL 136 Query: 831 SGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEH 890 SGG QRV LA L L +LDEPT G+ + ++++ L QG TI+V H Sbjct: 137 SGGWKQRVSLACALLH---DPKLIVLDEPTAGVDPVSRRIFWNIINLLAGQGMTILVSTH 193 Query: 891 NLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEA 929 +D + D+I G G+++ GTP+ + E E Sbjct: 194 YMDEADSCDYI------GFVFNGKLIAFGTPQEMKEREH 226 Score = 83.8 bits (206), Expect = 3e-14, Method: Composition-based stats. Identities = 37/157 (23%), Positives = 65/157 (41%), Gaps = 25/157 (15%) Query: 433 DMSIGHAMEFFNNL-KLAGQRAKIAEKILKEI---GDRLKFLVNVGLNYLTLSRSAETLS 488 D+++ M F+ + L+GQR ++ + E+ +RL LV +LS Sbjct: 91 DLTVEENMNFYAGVYNLSGQRKLQQKQKIIELVGLKERLGQLVQ-------------SLS 137 Query: 489 GGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDE 548 GG QR+ LA + + VLDEP+ G+ + L G T++V H Sbjct: 138 GGWKQRVSLACALLH--DPKLIVLDEPTAGVDPVSRRIFWNIINLLAGQGMTILVSTHYM 195 Query: 549 DAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPE 585 D + D++ V G+++A G + + Sbjct: 196 DEADSCDYI------GFVFNGKLIAFGTPQEMKEREH 226 >UniRef50_C4F9Q6 Putative uncharacterized protein n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4F9Q6_9ACTN Length = 750 Score = 133 bits (336), Expect = 3e-29, Method: Composition-based stats. Identities = 65/239 (27%), Positives = 96/239 (40%), Gaps = 17/239 (7%) Query: 412 TRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDRLKFLV 471 RLR YV PL I + F+ + + I E E+ R+ + Sbjct: 71 ERLRVRELVGYVRQDPLDQIVSSLV------FDEVAFGPRNLGIDED---EVARRVDEAL 121 Query: 472 NVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTL 531 + L + R LSGGE QR+ LA + + VLDEP+ L R E + G Sbjct: 122 ELSLLHGFDQRVTTELSGGEQQRLALAGVLA--MRPRYLVLDEPTSQLDPRSRELMRGLF 179 Query: 532 IHL-RDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQ 590 L + G ++++ HD+D I AD VI + G+ G A G + + Sbjct: 180 TALSHERGLGLVLITHDDDEIALADRVI-VCDGSVARGS---ACGEAHSGAETRIEAGLR 235 Query: 591 YMSGKRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTL 649 G+R + + + V+ G R L V L L G + G SG+GKSTL Sbjct: 236 VDVGRRVTGGAARETVVSLDGVVSSRGGRT-VLDGVDLDLHAGELVILAGASGAGKSTL 293 Score = 92.3 bits (228), Expect = 9e-17, Method: Composition-based stats. Identities = 30/100 (30%), Positives = 52/100 (52%), Gaps = 4/100 (4%) Query: 805 ALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLH 864 +AR++ +++ L + + T LSGGE QR+ LA L+ R +LDEPT+ L Sbjct: 112 EVARRVDEALELSLLHGFDQRVTTELSGGEQQRLALAGVLAMR---PRYLVLDEPTSQLD 168 Query: 865 FADIQQLLDVLHKL-RDQGNTIVVIEHNLDVIKTADWIVD 903 + + + L ++G +V+I H+ D I AD ++ Sbjct: 169 PRSRELMRGLFTALSHERGLGLVLITHDDDEIALADRVIV 208 Score = 90.0 bits (222), Expect = 4e-16, Method: Composition-based stats. Identities = 32/133 (24%), Positives = 61/133 (45%), Gaps = 6/133 (4%) Query: 773 RETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSG 832 + E ++ T+ + + A FD +++ VGL L +S LSG Sbjct: 324 FQQPEAQFFHDTVFDEVAFAPRNAG--FDEGEVRVLVERSIGAVGLPVEVLERSPFELSG 381 Query: 833 GEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNL 892 G+A+RV +A ++ YI DEP+ L + + +L ++G ++V+ H+L Sbjct: 382 GQARRVAIASVIALDAPA---YIFDEPSAALDAEGRSFIHRLACELVNEGRAVLVVTHDL 438 Query: 893 -DVIKTADWIVDL 904 + + AD ++ L Sbjct: 439 PEWERLADRVLVL 451 Score = 80.4 bits (197), Expect = 3e-13, Method: Composition-based stats. Identities = 39/123 (31%), Positives = 58/123 (47%), Gaps = 5/123 (4%) Query: 443 FNNLKLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIG 502 F+ + A + A E ++ + +R + VGL L RS LSGG+A+R+ +AS I Sbjct: 337 FDEVAFAPRNAGFDEGEVRVLVER--SIGAVGLPVEVLERSPFELSGGQARRVAIASVIA 394 Query: 503 AGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHD-EDAIRAADHVIDIG 561 L Y+ DEPS L + L + G V+VV HD + R AD V+ + Sbjct: 395 --LDAPAYIFDEPSAALDAEGRSFIHRLACELVNEGRAVLVVTHDLPEWERLADRVLVLE 452 Query: 562 PGA 564 G Sbjct: 453 GGV 455 >UniRef50_C9RX51 ABC transporter related protein n=4 Tax=Geobacillus RepID=C9RX51_GEOSY Length = 484 Score = 133 bits (335), Expect = 3e-29, Method: Composition-based stats. Identities = 68/295 (23%), Positives = 123/295 (41%), Gaps = 32/295 (10%) Query: 412 TRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDRLKFLV 471 RL+R R YV P + F + + E+ R++ L+ Sbjct: 67 ERLKRPERWGYVFQDPDAQFCMPYADEEIAFALENQSVPRH---------EMPVRIRALL 117 Query: 472 NVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTL 531 + + TLSGG QR+ LAS + L + LDEP+ L + + + T+ Sbjct: 118 DQVGLEIAPHTDIHTLSGGMKQRLALASVLA--LEPDVLFLDEPTALLDEEGTKAVWQTV 175 Query: 532 IHLRDLGNTVIVVEHD-EDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLT-- 588 + G TV++VEH + + D ++ G G ++A+G +A+ + +++ Sbjct: 176 KQV-GRGKTVVIVEHKIDHVLDFVDRIVLFG-----RDGRIIADGEAKAVFSDYKNVIAA 229 Query: 589 -GQYMSGKRK--IEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLP-----VGLFTCITG 640 G + G ++R E++L+L RG ++ + +P G + +TG Sbjct: 230 EGIWYPGVWDDYDRTARRRNRHQGEELLRLARFRGFRGREAKIYVPEAAVHAGEWIAVTG 289 Query: 641 VSGSGKSTLINDTLFPI---AQRQLNGATIAEPAP-YRDIQGLEHFDKVIDIDQS 691 +G+GKSTL++ + I + L GA I P YR I + + + S Sbjct: 290 KNGAGKSTLLHALMQLIRTDGEYMLLGADIKRQHPLYRHIAFVFQNPEWQFVAHS 344 Score = 92.3 bits (228), Expect = 9e-17, Method: Composition-based stats. Identities = 37/127 (29%), Positives = 54/127 (42%), Gaps = 11/127 (8%) Query: 808 RKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFAD 867 R L VGL I TLSGG QR+ LA L+ + LDEPT L Sbjct: 112 RIRALLDQVGL-EIAPHTDIHTLSGGMKQRLALASVLA---LEPDVLFLDEPTALLDEEG 167 Query: 868 IQQLLDVLHKLRDQGNTIVVIEHNLDV-IKTADWIVDLGPEGGSGGGEILVSGTPETVAE 926 + + + + +G T+V++EH +D + D IV G + G I+ G + V Sbjct: 168 TKAVWQTVKQ-VGRGKTVVIVEHKIDHVLDFVDRIVLFGRD-----GRIIADGEAKAVFS 221 Query: 927 CEASHTA 933 + A Sbjct: 222 DYKNVIA 228 Score = 79.6 bits (195), Expect = 6e-13, Method: Composition-based stats. Identities = 36/157 (22%), Positives = 70/157 (44%), Gaps = 11/157 (7%) Query: 753 MHFLPDIYVPCDQCKGKRYNRETLEIKYKGKTIHEVLDMTIE-EAREFFDAVPALARKLQ 811 M DI + + + E ++ ++ E L ++ E R + + R L+ Sbjct: 313 MLLGADIKRQHPLYRHIAFVFQNPEWQFVAHSVREELAYSLRLEGRPEAEIEETITRLLR 372 Query: 812 TLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQL 871 V + Q LS G+ +R+ +A + GQ L++LDEPT G + L Sbjct: 373 EFDLV----EQQDQHPYQLSVGQKRRLSVAASIV---AGQRLFLLDEPTFGQDAKNTFAL 425 Query: 872 LDVLHKLRDQGNTIVVIEHNLDVIKTA---DWIVDLG 905 L++L R+QG I+++ H+ +++ W+++ G Sbjct: 426 LEMLEAYREQGAVIMMVTHDEQIVRRFATRQWVIEDG 462 Score = 70.7 bits (172), Expect = 2e-10, Method: Composition-based stats. Identities = 33/140 (23%), Positives = 60/140 (42%), Gaps = 12/140 (8%) Query: 430 AISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTLSRSAETLSG 489 S+ + + +L+L G+ E+ + + + + LS Sbjct: 339 QFVAHSVREELAY--SLRLEGRPEAEIEETITRLLREFDLVEQQ-------DQHPYQLSV 389 Query: 490 GEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDED 549 G+ +R+ +A+ I AG +++LDEP+ G ++ LL L R+ G +++V HDE Sbjct: 390 GQKRRLSVAASIVAG--QRLFLLDEPTFGQDAKNTFALLEMLEAYREQGAVIMMVTHDEQ 447 Query: 550 AIRA-ADHVIDIGPGAGVHG 568 +R A I GA V Sbjct: 448 IVRRFATRQWVIEDGALVRD 467 >UniRef50_Q7WNN2 Probable ATP-binding component of ABC transporter n=1 Tax=Bordetella bronchiseptica RepID=Q7WNN2_BORBR Length = 549 Score = 133 bits (334), Expect = 4e-29, Method: Composition-based stats. Identities = 67/259 (25%), Positives = 102/259 (39%), Gaps = 36/259 (13%) Query: 423 VENTPLPAISDMSIGHA-------MEFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNVGL 475 V + + + + NLK ++ +K L VGL Sbjct: 83 VRGRKIGIVFQDPMASLNPIMTLGAQILENLKPMPGDSRAYRSARA-----IKLLDEVGL 137 Query: 476 N--YLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIH 533 L R LSGG+ QR +A + A + + DEP+ L ++LG L Sbjct: 138 PDPAAMLGRHPFELSGGQQQRAMIAMTLAAE--PALLIADEPTTALDVTTQAQILGLLRG 195 Query: 534 L-RDLGNTVIVVEHDEDAIRA-ADHVIDIGPGAGVHGGEVVAEGPLEAIMAVP-ESLTGQ 590 + R ++ + HD DA+R +D V A + GG +V +GP ++ P T Sbjct: 196 IQRQRRMAMLFISHDLDAVRTMSDRV------AVMCGGRLVEQGPAREVLLAPRHDYTRT 249 Query: 591 YMSGKRKIEVPKKRVPANPEKVLKLTGA--------RGNNLKDVTLTLPVGLFTCITGVS 642 M+ + ++ PA+ E ++L G L+ VTL + G I G S Sbjct: 250 LMAAHAPQPLKRRHAPASAETAIELDGVCVDYGRWKPKRALEQVTLQVRAGATLGIAGES 309 Query: 643 GSGKSTL---INDTLFPIA 658 GSGKSTL I L P A Sbjct: 310 GSGKSTLAQAIMGLLEPSA 328 Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats. Identities = 41/129 (31%), Positives = 61/129 (47%), Gaps = 11/129 (8%) Query: 810 LQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQ 869 + L DVGL L + +SGG+ QRV +AR L+ + + I DEP + L + Sbjct: 391 IAMLEDVGLAPDLLARFPHQISGGQRQRVVIARALAMQ---PRVLICDEPVSALDASVRN 447 Query: 870 QLLDVLHKLRDQ-GNTIVVIEHNLD-VIKTADWIVDLGPEGGSGGGEILVSGTPETVAEC 927 Q+L +L +LRDQ G T+V I H+L + AD I+ + G ++ G V Sbjct: 448 QILALLARLRDQHGLTLVFIGHDLGVMASLADDILVMRR------GRVVEHGEAARVFAN 501 Query: 928 EASHTARFL 936 R L Sbjct: 502 PGHPFTREL 510 Score = 100 bits (249), Expect = 3e-19, Method: Composition-based stats. Identities = 39/134 (29%), Positives = 60/134 (44%), Gaps = 13/134 (9%) Query: 807 ARKLQTLMDVGLTYI--RLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLH 864 AR ++ L +VGL LG+ LSGG+ QR +A L+ L I DEPTT L Sbjct: 126 ARAIKLLDEVGLPDPAAMLGRHPFELSGGQQQRAMIAMTLA---AEPALLIADEPTTALD 182 Query: 865 FADIQQLLDVLHKL-RDQGNTIVVIEHNLDVIK-TADWIVDLGPEGGSGGGEILVSGTPE 922 Q+L +L + R + ++ I H+LD ++ +D + + GG ++ G Sbjct: 183 VTTQAQILGLLRGIQRQRRMAMLFISHDLDAVRTMSDRVAVM------CGGRLVEQGPAR 236 Query: 923 TVAECEASHTARFL 936 V R L Sbjct: 237 EVLLAPRHDYTRTL 250 Score = 95.0 bits (235), Expect = 1e-17, Method: Composition-based stats. Identities = 36/138 (26%), Positives = 60/138 (43%), Gaps = 11/138 (7%) Query: 467 LKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNER 526 + L +VGL L+R +SGG+ QR+ +A + + + + DEP L + Sbjct: 391 IAMLEDVGLAPDLLARFPHQISGGQRQRVVIARALA--MQPRVLICDEPVSALDASVRNQ 448 Query: 527 LLGTLIHLRDL-GNTVIVVEHDEDAIR-AADHVIDIGPGAGVHGGEVVAEGPLEAIMAVP 584 +L L LRD G T++ + HD + AD ++ + G VV G + A P Sbjct: 449 ILALLARLRDQHGLTLVFIGHDLGVMASLADDILVMRR------GRVVEHGEAARVFANP 502 Query: 585 -ESLTGQYMSGKRKIEVP 601 T + + R + P Sbjct: 503 GHPFTRELLDASRLSDTP 520 >UniRef50_Q8TQW9 Putative ABC transporter ATP-binding protein MA_1418 n=4 Tax=Methanomicrobia RepID=Y1418_METAC Length = 528 Score = 132 bits (333), Expect = 5e-29, Method: Composition-based stats. Identities = 55/238 (23%), Positives = 98/238 (41%), Gaps = 16/238 (6%) Query: 461 KEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLH 520 KE+ R K ++ +R+ LSGG+ Q++ LA+ + L + +LDE + L Sbjct: 117 KEMVRRSKEAMDFCAISHLNNRAPHMLSGGQKQKVALAATLA--LDTEVLILDEATAELD 174 Query: 521 QRDNERLLGTLIHLRDLGNTVIVVEHD-EDAIRAADHVIDIGPGAGVHGGEVVAEGPLEA 579 + ++ L L+D G T+I+++H+ ED + D V+ + GE+ A Sbjct: 175 SQAVRKVFSVLKRLKDAGKTIIIIDHNIEDFLEIGDRVVLLEK------GEIKAIKSPSE 228 Query: 580 IMAVPESLTGQYM--SGKRKIEVPKKRVPANPEKVLKLTGARGNN---LKDVTLTLPVGL 634 + LT + + + ++P R P +K R L ++ L + G Sbjct: 229 FTSKSSDLTSTNLTSTSALQTDLPLSRTAEQPIISVKNLTQRYGEILALDNIDLEIYPGE 288 Query: 635 FTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSP 692 I G +GSGK+TL+ F R +G + E + Q+P Sbjct: 289 LVAILGENGSGKTTLVKH--FNGLLRPYSGKVTVKGLETSTTPINELVKHTGLVFQNP 344 Score = 95.4 bits (236), Expect = 1e-17, Method: Composition-based stats. Identities = 36/137 (26%), Positives = 65/137 (47%), Gaps = 11/137 (8%) Query: 801 DAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPT 860 + R + + ++++ ++ LSGG+ Q+V LA L+ + ILDE T Sbjct: 115 PEKEMVRRSKEAMDFCAISHLN-NRAPHMLSGGQKQKVALAATLA---LDTEVLILDEAT 170 Query: 861 TGLHFADIQQLLDVLHKLRDQGNTIVVIEHNL-DVIKTADWIVDLGPEGGSGGGEILVSG 919 L ++++ VL +L+D G TI++I+HN+ D ++ D +V L GEI Sbjct: 171 AELDSQAVRKVFSVLKRLKDAGKTIIIIDHNIEDFLEIGDRVVLL------EKGEIKAIK 224 Query: 920 TPETVAECEASHTARFL 936 +P + T+ L Sbjct: 225 SPSEFTSKSSDLTSTNL 241 Score = 90.8 bits (224), Expect = 3e-16, Method: Composition-based stats. Identities = 31/116 (26%), Positives = 62/116 (53%), Gaps = 11/116 (9%) Query: 804 PALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGL 863 A+ L++L V L + LS GE QR+ +A ++ + L +LDEPTTGL Sbjct: 370 EAVGAILRSLELVNLNDKQ-KVFPRHLSRGERQRLAVACIIAMK---PELIVLDEPTTGL 425 Query: 864 HFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIK-TADWIVDLGPEGGSGGGEILVS 918 + +++ ++ KL+ +G+TIV++ HNL +++ + ++ + G+++ Sbjct: 426 DAEESDRMMQLMRKLQQEGHTIVMVTHNLQIVRDHVERVIRM------ESGKVVED 475 Score = 88.5 bits (218), Expect = 1e-15, Method: Composition-based stats. Identities = 41/169 (24%), Positives = 71/169 (42%), Gaps = 18/169 (10%) Query: 414 LRREARHVYVENT-----PLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDR-- 466 LR + V V+ P+ + + G + +N+ L IG + Sbjct: 311 LRPYSGKVTVKGLETSTTPINELVKHT-GLVFQNPDNMLFEDTVEAEINFGLNNIGVKGP 369 Query: 467 ------LKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLH 520 L+ L V LN LS GE QR+ +A I + + VLDEP+ GL Sbjct: 370 EAVGAILRSLELVNLN-DKQKVFPRHLSRGERQRLAVACIIA--MKPELIVLDEPTTGLD 426 Query: 521 QRDNERLLGTLIHLRDLGNTVIVVEHDEDAIR-AADHVIDIGPGAGVHG 568 +++R++ + L+ G+T+++V H+ +R + VI + G V Sbjct: 427 AEESDRMMQLMRKLQQEGHTIVMVTHNLQIVRDHVERVIRMESGKVVED 475 Score = 45.3 bits (106), Expect = 0.012, Method: Composition-based stats. Identities = 15/69 (21%), Positives = 31/69 (44%), Gaps = 3/69 (4%) Query: 623 LKDVTLTLPVGLFTCITGVSGSGKSTL---INDTLFPIAQRQLNGATIAEPAPYRDIQGL 679 LK++ L + G +TG S +GK+TL + L ++ G + ++ G+ Sbjct: 19 LKNINLEIRKGELLLVTGHSAAGKTTLALAMAGILHHEIGGKIEGNISFQSRDVKEFDGI 78 Query: 680 EHFDKVIDI 688 + + I + Sbjct: 79 KELSRHIGV 87 >UniRef50_B6XUE0 Putative uncharacterized protein n=2 Tax=Bifidobacterium RepID=B6XUE0_9BIFI Length = 794 Score = 132 bits (332), Expect = 7e-29, Method: Composition-based stats. Identities = 59/285 (20%), Positives = 108/285 (37%), Gaps = 29/285 (10%) Query: 444 NNLKLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGA 503 +++ + IA +I R+ ++ +SGG+ QR+ +A + Sbjct: 118 DDVAFGPENLAIAHD---DIDMRIAMSLDAVDMSGQREADPTRMSGGQQQRVAIAGMLA- 173 Query: 504 GLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPG 563 + + VLDEP+ L + ++ L L+ G T+I+V H D AD +I + Sbjct: 174 -MSPEILVLDEPTAMLDPQGRADIMHILDELQQYGTTIILVTHHRDEFVNADRIIRL--- 229 Query: 564 AGVHGGEVV--AEGPLEAIMAVPESLTGQYMSGKRKIEVPK-KRVPANPEKVLKLTGA-- 618 G +V A G +I + ES T Q + K + P + ++++ Sbjct: 230 ---DNGRIVQSARGNTASIPEMDESDTAQEDNPIAKSNIANGASKPTSAVPIIEIRNLIY 286 Query: 619 -----RGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAEPAPY 673 L +++T+ G ITG +G+GK+TL L + +G P Sbjct: 287 QYPNSSKPVLDKLSITINKGETVAITGHNGAGKTTLAR--LLCALDQPQSGNITINTIPV 344 Query: 674 RDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGV 718 + + + D+ + T Y R+LFA Sbjct: 345 ARQRANGNMQSLKRADREKLRAT-----VGYVMQHPE-RQLFAET 383 Score = 101 bits (253), Expect = 9e-20, Method: Composition-based stats. Identities = 34/115 (29%), Positives = 56/115 (48%), Gaps = 11/115 (9%) Query: 827 ATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIV 886 T +SGG+ QRV +A L+ + +LDEPT L ++ +L +L+ G TI+ Sbjct: 155 PTRMSGGQQQRVAIAGMLAM---SPEILVLDEPTAMLDPQGRADIMHILDELQQYGTTII 211 Query: 887 VIEHNLDVIKTADWIVDLGPEGGSGGGEIL--VSGTPETVAECEASHTARFLKPM 939 ++ H+ D AD I+ L G I+ G ++ E + S TA+ P+ Sbjct: 212 LVTHHRDEFVNADRIIRLD------NGRIVQSARGNTASIPEMDESDTAQEDNPI 260 Score = 86.9 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 33/137 (24%), Positives = 62/137 (45%), Gaps = 7/137 (5%) Query: 771 YNRETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTL 830 Y + E + +T+ E D+ + D R Q + + + ++ +S L Sbjct: 370 YVMQHPERQLFAETVAE--DIAYGPRNQHLDETQVSERVNQAMTLLHIEHL-ADRSPFDL 426 Query: 831 SGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEH 890 SGG+ + +A ++ + + I+DEPT GL A + +++ L QG TI++I H Sbjct: 427 SGGQQRLAAIAGIIACQ---PQILIMDEPTAGLDEAATTCVHNLIQTLHAQGITILIISH 483 Query: 891 NLDVIKT-ADWIVDLGP 906 + I AD ++ L Sbjct: 484 SQTEIDVLADRVIALDR 500 Score = 78.4 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 24/105 (22%), Positives = 48/105 (45%), Gaps = 5/105 (4%) Query: 461 KEIGDRLK-FLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGL 519 ++ +R+ + + + +L RS LSGG+ + +A I + ++DEP+ GL Sbjct: 400 TQVSERVNQAMTLLHIEHLA-DRSPFDLSGGQQRLAAIAGIIACQ--PQILIMDEPTAGL 456 Query: 520 HQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIR-AADHVIDIGPG 563 + + + L G T++++ H + I AD VI + Sbjct: 457 DEAATTCVHNLIQTLHAQGITILIISHSQTEIDVLADRVIALDRR 501 >UniRef50_A7I7V3 Cobalt ABC transporter, ATPase subunit n=4 Tax=Euryarchaeota RepID=A7I7V3_METB6 Length = 403 Score = 131 bits (331), Expect = 8e-29, Method: Composition-based stats. Identities = 65/316 (20%), Positives = 113/316 (35%), Gaps = 97/316 (30%) Query: 623 LKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAEPAPYRDIQGLEHF 682 L VT ++ G + G +G+GK+TL+ L + EP+ R Sbjct: 21 LSGVTFSIKKGARVALVGPNGAGKTTLM-----------LMANGVLEPSKGR-------- 61 Query: 683 DKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESRARGYTPGRFSFNVRGGRCEA 742 + +D P+ RS VR+ V + Sbjct: 62 ---VLLDGEPLRYDSRS--------LREVRKKVGMV-------FQNSDTQLFAP------ 97 Query: 743 CQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDA 802 + ++ F P L++ +E Sbjct: 98 -----TVYQDVAFGP-------------------------------LNLGMEP-----GE 116 Query: 803 VPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTG 862 + + R+ L++VGL + LSGGE +R +A L+ + + DEPT+ Sbjct: 117 IEKVVRR--ALLEVGLAGFE-KRPPHQLSGGEKKRAAIAGTLAM---DPEILVFDEPTSS 170 Query: 863 LHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIK-TADWIVDLGPEGGSGGGEILVSGTP 921 L A L+++L +L +G TI++ H++++ AD I+ + G +L SGTP Sbjct: 171 LDPAGAADLMELLDELHAKGATIIISTHDVELAYLWADQIILMNK------GTVLHSGTP 224 Query: 922 ETVAECEASHTARFLK 937 E V A T+ L+ Sbjct: 225 EEVFTDPALVTSSNLR 240 Score = 102 bits (255), Expect = 6e-20, Method: Composition-based stats. Identities = 40/184 (21%), Positives = 65/184 (35%), Gaps = 16/184 (8%) Query: 462 EIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQ 521 EI ++ + R LSGGE +R +A + + + V DEP+ L Sbjct: 116 EIEKVVRRALLEVGLAGFEKRPPHQLSGGEKKRAAIAGTLA--MDPEILVFDEPTSSLDP 173 Query: 522 RDNERLLGTLIHLRDLGNTVIVVEHDEDAIRA-ADHVIDIGPGAGVHGGEVVAEGPLEAI 580 L+ L L G T+I+ HD + AD +I + G +H G E + Sbjct: 174 AGAADLMELLDELHAKGATIIISTHDVELAYLWADQIILMNKGTVLH------SGTPEEV 227 Query: 581 MAVPESLTGQYMSGKRKIEV-------PKKRVPANPEKVLKLTGARGNNLKDVTLTLPVG 633 P +T + +EV +P+ VL+L + N +G Sbjct: 228 FTDPALVTSSNLRMPAVLEVYTELLSRKMVEKTQSPKSVLQLVSSLEQNFSKPRADRALG 287 Query: 634 LFTC 637 Sbjct: 288 TIAV 291 >UniRef50_B9JQI4 ABC transporter, ATP-binding protein n=1 Tax=Agrobacterium radiobacter K84 RepID=B9JQI4_AGRRK Length = 558 Score = 131 bits (329), Expect = 1e-28, Method: Composition-based stats. Identities = 64/302 (21%), Positives = 110/302 (36%), Gaps = 34/302 (11%) Query: 414 LRREARHVYVENTPLPAISDMSIGHAMEFFN-NLKLAGQRAKIAEKILKE-IGDRLKFLV 471 L A + + I + ++A E I + L + Sbjct: 88 LGETALR-RLRGARIGYIFQEPMTALNPLLTIGRQIAEALKAHGHPAPPERIAELLAAMR 146 Query: 472 NVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTL 531 L R LSGG+ QR+ +A + G + + DEP+ L +L + Sbjct: 147 LPDPGTL-RRRYPHELSGGQRQRVAIAIAMACG--PDLLIADEPTTALDVTTQAEILRLI 203 Query: 532 IHLRD-LGNTVIVVEHDEDAIR-AADHVIDIGPGAGVHGGEVVAEGPLEAIMAVP-ESLT 588 + LR G V+ + HD +R AD ++ + GE+V G E +++ P T Sbjct: 204 LDLRARRGLAVLFITHDFGVVRDIADRIVVM------QNGEIVEHGNAEQLLSAPTHPYT 257 Query: 589 GQYMSGKRKIEVPKKRVPANPEKVLKLTGARGNN----------------LKDVTLTLPV 632 + ++ K+E + + ++ L+L G + L + LTL + Sbjct: 258 RRLLAAVPKLEARRSPLASDLPAALELEGIHKTHFTRRHFLGSARPATQALGGIDLTLRI 317 Query: 633 GLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATI--AEPAPYRDIQGLEHFDKVIDIDQ 690 G + G SGSGKSTL + + +R + RD+ E V + Q Sbjct: 318 GETVALVGESGSGKSTL-GQVITGLVERDAGTFRLSGEAIGRARDLFTRERRPAVQMVFQ 376 Query: 691 SP 692 P Sbjct: 377 DP 378 Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats. Identities = 42/156 (26%), Positives = 67/156 (42%), Gaps = 13/156 (8%) Query: 783 KTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLAR 842 +I +L + + A R ++ L+ +GL + SGG+ QR+ LAR Sbjct: 386 HSIRRILTEPVLQTG--LSKEEAETRMMELLLRIGLDPSSADRKPHAFSGGQRQRIGLAR 443 Query: 843 ELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLR-DQGNTIVVIEHNLDV-IKTADW 900 L R L + DEP + L + Q+LD+L +L+ D G ++ I H+L V + AD Sbjct: 444 ALMPR---PRLLVADEPVSALDVSVQAQVLDLLAELQSDLGLAMLFITHDLRVAARVADR 500 Query: 901 IVDLGPEGGSGGGEILVSGTPETVAECEASHTARFL 936 I + G I+ + S AR L Sbjct: 501 IAVMQH------GVIVEEAATADLLRTPRSTYARAL 530 Score = 100 bits (250), Expect = 2e-19, Method: Composition-based stats. Identities = 42/152 (27%), Positives = 65/152 (42%), Gaps = 14/152 (9%) Query: 793 IEEAREFFDAVPALARKLQTLMDVGLTYIR--LGQSATTLSGGEAQRVKLARELSKRGTG 850 I EA + R + L + L + LSGG+ QRV +A ++ G Sbjct: 122 IAEALKAHGHPAPPERIAELLAAMRLPDPGTLRRRYPHELSGGQRQRVAIAIAMA---CG 178 Query: 851 QTLYILDEPTTGLHFADIQQLLDVLHKLRD-QGNTIVVIEHNLDVIK-TADWIVDLGPEG 908 L I DEPTT L ++L ++ LR +G ++ I H+ V++ AD IV + Sbjct: 179 PDLLIADEPTTALDVTTQAEILRLILDLRARRGLAVLFITHDFGVVRDIADRIVVM---- 234 Query: 909 GSGGGEILVSGTPETVAECE-ASHTARFLKPM 939 GEI+ G E + +T R L + Sbjct: 235 --QNGEIVEHGNAEQLLSAPTHPYTRRLLAAV 264 Score = 86.9 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 36/151 (23%), Positives = 60/151 (39%), Gaps = 10/151 (6%) Query: 465 DRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDN 524 ++ L+ +GL+ + R SGG+ QRI LA + + V DEP L Sbjct: 409 RMMELLLRIGLDPSSADRKPHAFSGGQRQRIGLARALM--PRPRLLVADEPVSALDVSVQ 466 Query: 525 ERLLGTLIHLR-DLGNTVIVVEHDEDA-IRAADHVIDIGPGAGVHGGEVVAEGPLEAIMA 582 ++L L L+ DLG ++ + HD R AD + A + G +V E ++ Sbjct: 467 AQVLDLLAELQSDLGLAMLFITHDLRVAARVADRI------AVMQHGVIVEEAATADLLR 520 Query: 583 VPESLTGQYMSGKRKIEVPKKRVPANPEKVL 613 P S + + + AN + Sbjct: 521 TPRSTYARALIAAVPGRNGETEPVANSSSRI 551 >UniRef50_A7BDU3 Putative uncharacterized protein n=1 Tax=Actinomyces odontolyticus ATCC 17982 RepID=A7BDU3_9ACTO Length = 518 Score = 130 bits (328), Expect = 2e-28, Method: Composition-based stats. Identities = 57/203 (28%), Positives = 89/203 (43%), Gaps = 24/203 (11%) Query: 468 KFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERL 527 + L +VGL+ LSGG QR+ +AS + + + + DEP+ L + Sbjct: 135 ELLADVGLDARVARSYPHELSGGMRQRVAIASALDSE--PRVLIADEPTTALDVTTQRDI 192 Query: 528 LGTLIHLRD-LGNTVIVVEHDEDAIRAA-DHVIDIGPGAGVHGGEVVAEGPLEAIMAVP- 584 L L LRD T+++V HD R D VI + G++V EGP+ ++A P Sbjct: 193 LTLLTRLRDERAMTLVLVTHDLGLARQFGDDVIVMKD------GQIVEEGPVNEVLASPR 246 Query: 585 ESLTGQYMSGKRKIEVPKKR----VPANPEKVLKLTGARG---------NNLKDVTLTLP 631 T + + +I+ P R PA E ++++ L DV+L + Sbjct: 247 HEYTKRLSDAEPRIDGPNPREGKSTPAGAETIVEVRDLTKVFRSRKDLHVALMDVSLEIA 306 Query: 632 VGLFTCITGVSGSGKSTLINDTL 654 G I G SGSGK+TL + Sbjct: 307 QGESIGIVGESGSGKTTLARIIV 329 Score = 106 bits (265), Expect = 4e-21, Method: Composition-based stats. Identities = 45/163 (27%), Positives = 71/163 (43%), Gaps = 14/163 (8%) Query: 780 YKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVK 839 Y + T+ EA PA + + L V L + + LSGGE QRV Sbjct: 359 YSALNPARTIGQTLAEAASV-AGRPA-SDVAELLAAVELPAEYAKRRPSRLSGGERQRVA 416 Query: 840 LARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKL-RDQGNTIVVIEHNLDVIK-T 897 +AR L+ R + I DE + L + +LD+L +L +QG +V I H+L V + Sbjct: 417 IARALATR---PRVLIADEAVSALDVSVQASILDLLTRLQAEQGFALVFITHDLAVARAM 473 Query: 898 ADWIVDLGPEGGSGGGEILVSGTPETVAECE-ASHTARFLKPM 939 D +V + GG ++ G+ E + +TA L + Sbjct: 474 CDRLVIM------KGGVVVEEGSTEEILHNPSEEYTAELLSAV 510 Score = 103 bits (256), Expect = 5e-20, Method: Composition-based stats. Identities = 39/142 (27%), Positives = 60/142 (42%), Gaps = 12/142 (8%) Query: 796 AREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYI 855 A R + L DVGL LSGG QRV +A L + + I Sbjct: 120 AARTGRRSERAQRSRELLADVGLDARVARSYPHELSGGMRQRVAIASAL---DSEPRVLI 176 Query: 856 LDEPTTGLHFADIQQLLDVLHKLRDQ-GNTIVVIEHNLDVIKTA-DWIVDLGPEGGSGGG 913 DEPTT L + +L +L +LRD+ T+V++ H+L + + D ++ + G Sbjct: 177 ADEPTTALDVTTQRDILTLLTRLRDERAMTLVLVTHDLGLARQFGDDVIVM------KDG 230 Query: 914 EILVSGTPETVAECEAS-HTAR 934 +I+ G V +T R Sbjct: 231 QIVEEGPVNEVLASPRHEYTKR 252 Score = 88.5 bits (218), Expect = 1e-15, Method: Composition-based stats. Identities = 36/130 (27%), Positives = 54/130 (41%), Gaps = 11/130 (8%) Query: 468 KFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERL 527 + L V L R LSGGE QR+ +A + + + DE L + Sbjct: 388 ELLAAVELPAEYAKRRPSRLSGGERQRVAIARALATR--PRVLIADEAVSALDVSVQASI 445 Query: 528 LGTLIHLR-DLGNTVIVVEHDEDAIRA-ADHVIDIGPGAGVHGGEVVAEGPLEAIMAVP- 584 L L L+ + G ++ + HD RA D ++ + GG VV EG E I+ P Sbjct: 446 LDLLTRLQAEQGFALVFITHDLAVARAMCDRLVIMK------GGVVVEEGSTEEILHNPS 499 Query: 585 ESLTGQYMSG 594 E T + +S Sbjct: 500 EEYTAELLSA 509 >UniRef50_A6VSE8 Polar amino acid ABC transporter, inner membrane subunit n=13 Tax=Gammaproteobacteria RepID=A6VSE8_MARMS Length = 506 Score = 130 bits (328), Expect = 2e-28, Method: Composition-based stats. Identities = 72/344 (20%), Positives = 113/344 (32%), Gaps = 106/344 (30%) Query: 606 PANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGA 665 PA L L V L++ G + G SGSGK+TLI Sbjct: 256 PALKATKLHKAFNNVEVLGSVNLSINSGEVVSVIGPSGSGKTTLI--------------- 300 Query: 666 TIAEPAPYRDIQGLEHFDK-VIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESRAR 724 R + GLE D ID++ P + RS+P Sbjct: 301 --------RLLNGLEQLDNGAIDLNGQPFLKLLRSSP----------------------- 329 Query: 725 GYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKYKGKT 784 RF N ++ M F P Sbjct: 330 --DKTRFVENAEL----------RTQIGMVFQSFNLFPH--------------------- 356 Query: 785 IHEVLDMTIEEAREFFDAVPALA-------RKLQTLMDVG-LTYIRLGQSATTLSGGEAQ 836 +T+ E + + Q L VG L ++ + LSGG+ Q Sbjct: 357 ------LTVLENLMLAPRYHKMGSRKDLEMQAYQLLYKVGMLDHVW--KYPHQLSGGQQQ 408 Query: 837 RVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVI- 895 RV +AR L R + + DEPT+ L + ++L V+ L +G T+V++ H + Sbjct: 409 RVAIARALMMR---PQIMLFDEPTSALDPEKVNEVLQVIEDLAQEGITMVIVTHEMSFAF 465 Query: 896 KTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLKPM 939 K +D +V + G ++ +P+ + E FLK + Sbjct: 466 KVSDRVVFMEQ------GRVVCDDSPQVLREGNNPRIESFLKDV 503 Score = 90.8 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 31/161 (19%), Positives = 63/161 (39%), Gaps = 21/161 (13%) Query: 440 MEFFNNLKLAGQRAKIA-----EKILKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQR 494 + NL LA + K+ E ++ ++ L +V + LSGG+ QR Sbjct: 357 LTVLENLMLAPRYHKMGSRKDLEMQAYQLLYKVGMLDHVW-------KYPHQLSGGQQQR 409 Query: 495 IRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDED-AIRA 553 + +A + + + + DEP+ L +L + L G T+++V H+ A + Sbjct: 410 VAIARALM--MRPQIMLFDEPTSALDPEKVNEVLQVIEDLAQEGITMVIVTHEMSFAFKV 467 Query: 554 ADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSG 594 +D V+ + G VV + + + ++ Sbjct: 468 SDRVVFM------EQGRVVCDDSPQVLREGNNPRIESFLKD 502 >UniRef50_B7A663 ABC transporter related n=1 Tax=Thermus aquaticus Y51MC23 RepID=B7A663_THEAQ Length = 332 Score = 130 bits (328), Expect = 2e-28, Method: Composition-based stats. Identities = 49/172 (28%), Positives = 74/172 (43%), Gaps = 11/172 (6%) Query: 760 YVPCDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLT 819 +P + E + Y + + MT E F + L L VGL Sbjct: 46 LIPAEGTPYSGLPPEKRPVGYLPQDLALFPHMTALENVAFPLSGRGRGEALALLERVGLL 105 Query: 820 YIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLL-DVLHKL 878 + LSGG+ QRV LAR L+++ L +LDEPT+ L ++L +++ L Sbjct: 106 E-HAHKRPQALSGGQRQRVALARALARK---PELLLLDEPTSALDPVTKGRVLGELVDLL 161 Query: 879 RDQGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEAS 930 R +G + + H+ + ADW+V LG G +L G PE V AS Sbjct: 162 RREGLPALAVSHDPLLAGMADWLVVLGR------GRVLQEGPPEEVLSAPAS 207 Score = 102 bits (254), Expect = 8e-20, Method: Composition-based stats. Identities = 54/201 (26%), Positives = 80/201 (39%), Gaps = 25/201 (12%) Query: 412 TRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDRLKFLV 471 + L E R V L M+ + F L+G+ G+ L L Sbjct: 55 SGLPPEKRPVGYLPQDLALFPHMTALENVAF----PLSGRGR----------GEALALLE 100 Query: 472 NVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTL 531 VGL R LSGG+ QR+ LA + + +LDEP+ L R+LG L Sbjct: 101 RVGLLEHAHKRPQA-LSGGQRQRVALARALARK--PELLLLDEPTSALDPVTKGRVLGEL 157 Query: 532 IH-LRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQ 590 + LR G + V HD AD ++ +G G V+ EGP E +++ P S+ Sbjct: 158 VDLLRREGLPALAVSHDPLLAGMADWLVVLGR------GRVLQEGPPEEVLSAPASVEVA 211 Query: 591 YMSGKRKIEVPKKRVPANPEK 611 + G + P + P E Sbjct: 212 RLLGYENL-FPVRVAPGGVEA 231 >UniRef50_B9Y318 Putative uncharacterized protein (Fragment) n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y318_9FIRM Length = 143 Score = 130 bits (326), Expect = 3e-28, Method: Composition-based stats. Identities = 50/120 (41%), Positives = 66/120 (55%) Query: 363 DRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGTRLRREARHVY 422 G+ R EGV +ERR+ ET S+ RE A F++ PC C G RL A V Sbjct: 2 RSGNRFSRNDYIEGVKTLIERRFVETTSTMSREWYASFMAESPCPKCGGKRLNEMALSVR 61 Query: 423 VENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTLSR 482 V + + MS+ A++F NL+L RA+IA ++KEI RL FL +VGL YLTL R Sbjct: 62 VGGKNIYEWTTMSVIQALDFMKNLQLDPMRAEIARLVIKEIVSRLTFLKDVGLEYLTLDR 121 Score = 58.4 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 25/89 (28%), Positives = 40/89 (44%), Gaps = 16/89 (17%) Query: 754 HFLPDIYVPCDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDA----------- 802 F+ + PC +C GKR N L ++ GK I+E M++ +A +F Sbjct: 38 SFMAES--PCPKCGGKRLNEMALSVRVGGKNIYEWTTMSVIQALDFMKNLQLDPMRAEIA 95 Query: 803 ---VPALARKLQTLMDVGLTYIRLGQSAT 828 + + +L L DVGL Y+ L + A Sbjct: 96 RLVIKEIVSRLTFLKDVGLEYLTLDRLAG 124 >UniRef50_C9LBL6 ABC transporter, ATP-binding protein n=7 Tax=Clostridiales RepID=C9LBL6_RUMHA Length = 562 Score = 129 bits (325), Expect = 4e-28, Method: Composition-based stats. Identities = 87/358 (24%), Positives = 140/358 (39%), Gaps = 68/358 (18%) Query: 409 CEGTRL-----RREARHV-YVENTPLPAISDMSIGHAMEF-FNNLKLAGQRAKIAEKILK 461 C G RL R ++ + YV +P I + H + F NL Q Sbjct: 68 C-GERLEGVSMRTQSAEIGYVLQSPDNQIVTDKVWHELAFGVENLGYDQQT--------- 117 Query: 462 EIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQ 521 I R+ + + S++ E LSGG+ Q + LAS + + + VLDEP+ L Sbjct: 118 -IRLRVAEMASFFGIQNWFSKNVEELSGGQKQLLNLASVMA--MQPKVLVLDEPTSQLDP 174 Query: 522 RDNERLLGTLIHLR-DLGNTVIVVEHD-EDAIRAADHVIDIGPGAGVHG------GEVVA 573 L T+ + DLG TVI++EH E+ AD V+ + G G+ +A Sbjct: 175 IAAGDFLSTIRKINLDLGITVIMIEHRLEEVFPMADKVLVLEGGKQTFFDNPRMVGKALA 234 Query: 574 EGPLEAIMAVPESL---TGQ-------------YMSGKRKIEVPKKRVPANPEK------ 611 + L M P + TGQ ++S K E +++ N EK Sbjct: 235 DNDLFLAMPSPVQIYNGTGQEGECPLTVCEGRNWLSEHYKAEPEREKTKDNAEKSANRKE 294 Query: 612 -----------VLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQR 660 + + +KD++L + G CI G +G+GKST + +L R Sbjct: 295 KQEYVIQAKELWFRYERDGQDIVKDLSLKVKKGELFCILGGNGTGKSTTL--SLLSGIHR 352 Query: 661 QLNGATIAEPAPYRDIQGLEHFDKVIDI-DQSP----IGRTPRSNPATYTGVFTPVRE 713 G + + R I E F + + Q+P +G + + G F+P+R Sbjct: 353 PYRGKILLDGRDIRKISDKELFHHFLGVLPQNPQSLFVGNSVEEDLWEMIGGFSPIRH 410 Score = 85.4 bits (210), Expect = 1e-14, Method: Composition-based stats. Identities = 29/124 (23%), Positives = 54/124 (43%), Gaps = 11/124 (8%) Query: 806 LARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHF 865 + ++ + ++ LSGG+ Q + LA ++ + + +LDEPT+ L Sbjct: 118 IRLRVAEMASFFGIQNWFSKNVEELSGGQKQLLNLASVMAMQ---PKVLVLDEPTSQLDP 174 Query: 866 ADIQQLLDVLHKLR-DQGNTIVVIEHNLDVI-KTADWIVDLGPEGGSGGGEILVSGTPET 923 L + K+ D G T+++IEH L+ + AD ++ L GG+ P Sbjct: 175 IAAGDFLSTIRKINLDLGITVIMIEHRLEEVFPMADKVLVL------EGGKQTFFDNPRM 228 Query: 924 VAEC 927 V + Sbjct: 229 VGKA 232 Score = 73.4 bits (179), Expect = 4e-11, Method: Composition-based stats. Identities = 31/126 (24%), Positives = 52/126 (41%), Gaps = 9/126 (7%) Query: 807 ARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFA 866 R + + D + ++ L LSGGE QR LA+ L L DEPT GL Sbjct: 415 KRVERVVEDTEIGHL-LHAHPYDLSGGEQQRAALAKVLLLEPQILLL---DEPTKGLDGF 470 Query: 867 DIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAE 926 +L + KL+++G TI+++ H+++ + G I+ S Sbjct: 471 YKSKLAGIFRKLQEKGITILMVSHDIEFCAS-----YGDTCAMFFDGSIVTSCKAREFFT 525 Query: 927 CEASHT 932 + +T Sbjct: 526 GNSFYT 531 Score = 70.7 bits (172), Expect = 2e-10, Method: Composition-based stats. Identities = 36/193 (18%), Positives = 67/193 (34%), Gaps = 28/193 (14%) Query: 423 VENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDRL--------------- 467 ++ + ISD + F L Q + + +++ + + Sbjct: 360 LDGRDIRKISDKEL--FHHFLGVLPQNPQSLFVGNSVEEDLWEMIGGFSPIRHKEDEKRV 417 Query: 468 -KFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNER 526 + + + + +L + LSGGE QR LA + ++ DEP+ GL + Sbjct: 418 ERVVEDTEIGHLLHAHPY-DLSGGEQQRAALAKVLLLEPQILLL--DEPTKGLDGFYKSK 474 Query: 527 LLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPG-AGVHGGEVVAEGPLEAIMAVPE 585 L G L++ G T+++V HD + + G A G +V Sbjct: 475 LAGIFRKLQEKGITILMVSHDIEFCAS------YGDTCAMFFDGSIVTSCKAREFFTGNS 528 Query: 586 SLTGQYMSGKRKI 598 T R+I Sbjct: 529 FYTTAANRMARQI 541 >UniRef50_B7R619 ABC transporter, ATP-binding protein n=1 Tax=Carboxydibrachium pacificum DSM 12653 RepID=B7R619_9THEO Length = 498 Score = 129 bits (325), Expect = 4e-28, Method: Composition-based stats. Identities = 59/263 (22%), Positives = 107/263 (40%), Gaps = 31/263 (11%) Query: 468 KFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERL 527 K L N+ + Y+ R A LS E Q + +A + + ++DEP+ L Q++ +RL Sbjct: 125 KALDNINI-YIDPKRLANDLSVAERQLVAIARAVLRNT--RLIIMDEPTTALTQKEIDRL 181 Query: 528 LGTLIHLRDLGNTVIVVEHDED-AIRAADHVIDIGPGAGVHGGEVVAEGPLEAI--MAVP 584 + + L++ G +++ V H D ++ AD ++ + GE V +G E+I + Sbjct: 182 MKVISTLKNKGTSILFVSHKLDEVLQIADRIVIL------RNGEKVFDGKAESIDRATIV 235 Query: 585 ESLTGQYMSGKRKIEVPKKRVPANPEKVLKLTGA-RGNNLKDVTLTLPVGLFTCITGVSG 643 + G+ +S + + K + + VLK+ R N D++ L G ITG+ G Sbjct: 236 RYMIGRELSHQLSLH---KEEKKDVQVVLKVEHLTRKGNFYDISFELKRGEILGITGLLG 292 Query: 644 SGKSTLINDTLFPIAQRQLNGATIAEPAPYRDIQGL----------EHFDKVIDIDQSPI 693 SG++ L + + IQ + + + I QS I Sbjct: 293 SGRTALALSLFGALPPDSGTIYVEGKQVTLNSIQDAIKHGIGYLPEDRVGEGLFISQS-I 351 Query: 694 GRTPRSNPATY----TGVFTPVR 712 G+ Y G+ R Sbjct: 352 GKNIVVRVINYMVKKIGLIDQFR 374 Score = 88.8 bits (219), Expect = 8e-16, Method: Composition-based stats. Identities = 36/106 (33%), Positives = 56/106 (52%), Gaps = 10/106 (9%) Query: 820 YIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLR 879 YI + A LS E Q V +AR + + L I+DEPTT L +I +L+ V+ L+ Sbjct: 133 YIDPKRLANDLSVAERQLVAIARAVLRNT---RLIIMDEPTTALTQKEIDRLMKVISTLK 189 Query: 880 DQGNTIVVIEHNLDV-IKTADWIVDLGPEGGSGGGEILVSGTPETV 924 ++G +I+ + H LD ++ AD IV L GE + G E++ Sbjct: 190 NKGTSILFVSHKLDEVLQIADRIVIL------RNGEKVFDGKAESI 229 Score = 71.9 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 26/117 (22%), Positives = 52/117 (44%), Gaps = 10/117 (8%) Query: 813 LMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLL 872 L + + ++LSGG QRV LA+ L+ + + IL+ PT G+ ++ Sbjct: 383 LKQLKIVTPSANLPVSSLSGGNQQRVVLAKWLA---SNPKILILNGPTVGVDVGSKMEIH 439 Query: 873 DVLHKLRDQGNTIVVIEHN-LDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECE 928 ++ L QG +VI + ++++ + I+ + G I+ E + E + Sbjct: 440 KLIRDLAAQGMAFIVISDDIPELLEISHRILLM------KKGRIVGEFLREMLTESK 490 Score = 64.6 bits (156), Expect = 2e-08, Method: Composition-based stats. Identities = 22/107 (20%), Positives = 47/107 (43%), Gaps = 5/107 (4%) Query: 469 FLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLL 528 +L + + + + +LSGG QR+ LA + + + +L+ P++G+ + Sbjct: 382 WLKQLKIVTPSANLPVSSLSGGNQQRVVLAKWLASN--PKILILNGPTVGVDVGSKMEIH 439 Query: 529 GTLIHLRDLGNTVIVVEHD-EDAIRAADHVIDIGPGAGVHGGEVVAE 574 + L G IV+ D + + + ++ + G V GE + E Sbjct: 440 KLIRDLAAQGMAFIVISDDIPELLEISHRILLMKKGRIV--GEFLRE 484 Score = 51.5 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 26/85 (30%), Positives = 39/85 (45%), Gaps = 7/85 (8%) Query: 609 PEKVLKLTGARGN-----NLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLN 663 E V++L N L+ V LTL G C+ G +GSGKSTLI + + Sbjct: 2 GEPVIELRQITKNFGGVKALRGVDLTLYRGEVCCLIGENGSGKSTLIK--IISGIHEPDS 59 Query: 664 GATIAEPAPYRDIQGLEHFDKVIDI 688 G I + Y+ + L+ K I++ Sbjct: 60 GEIIIDGFNYKRLYPLDSLKKGIEV 84 Score = 49.5 bits (117), Expect = 6e-04, Method: Composition-based stats. Identities = 48/232 (20%), Positives = 97/232 (41%), Gaps = 31/232 (13%) Query: 10 RTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAF----------DTLYAEGQRRYVESLSA 59 R N +I+ + R +++ +TGL GSG+++LA T+Y EG++ + S+ Sbjct: 268 RKGNFYDISFELKRGEILGITGLLGSGRTALALSLFGALPPDSGTIYVEGKQVTLNSIQD 327 Query: 60 YARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRL-----LFAR 114 + + + + V EGL + SI + V I + D R+ + + Sbjct: 328 AIKHGIGYLPEDRVG--EGLFISQSIGKNIVVRVINYMVKKI-GLIDQFRVNDTIQTWLK 384 Query: 115 VGEPRCPDHDVPLAAQTVSQMVDNVLS--QPEGKRLMLL----APIIKERKGEHTKTLEN 168 + P ++P+++ + VL+ ++++L + K E K + + Sbjct: 385 QLKIVTPSANLPVSSLSGGNQQRVVLAKWLASNPKILILNGPTVGVDVGSKMEIHKLIRD 444 Query: 169 LASQGYIRARIDGEVCDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAES 220 LA+QG I ++ +L + H I ++ V + L + L ES Sbjct: 445 LAAQGMAFIVISDDIPELLEI-------SHRILLMKKGRIVGEFLREMLTES 489 >UniRef50_C5D6I7 ABC transporter related n=1 Tax=Geobacillus sp. WCH70 RepID=C5D6I7_GEOSW Length = 483 Score = 128 bits (323), Expect = 9e-28, Method: Composition-based stats. Identities = 53/207 (25%), Positives = 99/207 (47%), Gaps = 20/207 (9%) Query: 460 LKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGL 519 +E+ +R++ L+ ++ TLSGG QR+ LAS + L + LDEP+ + Sbjct: 106 REEMKERIEKLLETVGLFVEPHTDIHTLSGGMKQRLALASVLA--LDPDVLFLDEPTAMI 163 Query: 520 HQRDNERLLGTLIHLRDLGNTVIVVEHD-EDAIRAADHVIDIGPGAGVHGGEVVAEGPLE 578 + E + T+ + TVI+VEH + + D +I GE++A+ + Sbjct: 164 DEEGTEAIWRTVKQIAHD-KTVIIVEHKIDHILDFVDRIILFND-----NGEIIADDKAQ 217 Query: 579 AIMAVPESLT---GQYMSGKRKIEVPKK---RVPANPEKVLKLTGARGNNLKDVTL---- 628 + + + + G + G + K+ RV E++++L +G L+DV + Sbjct: 218 TVFSDYKDIIASQGIWYPGVWDEYIAKRQRQRVNVRQEEIIRLREFQGYRLRDVKIRVEE 277 Query: 629 -TLPVGLFTCITGVSGSGKSTLINDTL 654 T+ G + ITG +G+GKSTL++ + Sbjct: 278 ATVCAGEWIAITGKNGAGKSTLLHALM 304 Score = 91.5 bits (226), Expect = 1e-16, Method: Composition-based stats. Identities = 34/148 (22%), Positives = 57/148 (38%), Gaps = 17/148 (11%) Query: 793 IEEAREF------FDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSK 846 ++E F R + L VGL ++ TLSGG QR+ LA L+ Sbjct: 91 VDEEIAFALENIGVPREEMKERIEKLLETVGL-FVEPHTDIHTLSGGMKQRLALASVLA- 148 Query: 847 RGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDV-IKTADWIVDLG 905 + LDEPT + + + + ++ T++++EH +D + D I+ Sbjct: 149 --LDPDVLFLDEPTAMIDEEGTEAIWRTVKQIAHD-KTVIIVEHKIDHILDFVDRIILFN 205 Query: 906 PEGGSGGGEILVSGTPETVAECEASHTA 933 GEI+ +TV A Sbjct: 206 -----DNGEIIADDKAQTVFSDYKDIIA 228 Score = 81.9 bits (201), Expect = 1e-13, Method: Composition-based stats. Identities = 32/139 (23%), Positives = 66/139 (47%), Gaps = 9/139 (6%) Query: 771 YNRETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTL 830 + + E ++ ++ E + ++ E + Q L L + Q L Sbjct: 332 FVFQNPEFQFVTNSVREEIAYSL--RLEKREEAEITETVEQFLQRFHL-RKQQHQHPYQL 388 Query: 831 SGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEH 890 S G+ +R+ +A + +GQ +++LDEPT G + LL++L R+QG TI+++ H Sbjct: 389 SMGQKRRLSVAASIV---SGQQIFLLDEPTFGQDAKNTFALLELLESYREQGATIMMVTH 445 Query: 891 NLDVIKTA---DWIVDLGP 906 + +++K W+++ G Sbjct: 446 DENIVKYFATRRWVIEDGQ 464 Score = 70.0 bits (170), Expect = 5e-10, Method: Composition-based stats. Identities = 30/143 (20%), Positives = 61/143 (42%), Gaps = 12/143 (8%) Query: 430 AISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTLSRSAETLSG 489 S+ + + +L+L + + +++ R + LS Sbjct: 340 QFVTNSVREEIAY--SLRLEKREEAEITETVEQFLQRFHLRKQQH-------QHPYQLSM 390 Query: 490 GEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDED 549 G+ +R+ +A+ I +G +++LDEP+ G ++ LL L R+ G T+++V HDE+ Sbjct: 391 GQKRRLSVAASIVSG--QQIFLLDEPTFGQDAKNTFALLELLESYREQGATIMMVTHDEN 448 Query: 550 AIRA-ADHVIDIGPGAGVHGGEV 571 ++ A I G V + Sbjct: 449 IVKYFATRRWVIEDGQLVKDERI 471 >UniRef50_A6NVD9 Putative uncharacterized protein n=2 Tax=Bacteroides capillosus ATCC 29799 RepID=A6NVD9_9BACE Length = 465 Score = 128 bits (322), Expect = 9e-28, Method: Composition-based stats. Identities = 74/273 (27%), Positives = 105/273 (38%), Gaps = 41/273 (15%) Query: 461 KEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLH 520 E+ L+ +V V L RS LSGGE QRI AS G ++VLDEPS L Sbjct: 116 DEMTQALESVVQVCGVGPLLERSIFALSGGEKQRIACASAWAMG--PELFVLDEPSSNLD 173 Query: 521 QRDNERLLGTLIHLRDLGNTVIVVEHDE-DAIRAADHVIDIGPGAGVHGGEVVAEGPLEA 579 +L L L+ G TV++ EH A AD V + G++ E + Sbjct: 174 GEGIRQLREILKQLKKGGKTVLMAEHRLWYAADLADRVFYL------RSGQLEREYNGKD 227 Query: 580 IMAVPESLTGQYMSGKRKIEVPKKRVPANPE--------KVLKLTGARGNNLKDVTLTLP 631 +A+PE + M + EVP +P + L+ T + V+ P Sbjct: 228 FLALPEE-ERRSMGLRSIAEVPVSSPEPSPAAGADGLMVRELRATYNGAAVWEGVSFHAP 286 Query: 632 VGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQS 691 G T ITG +G+GK+TL R L G + I D Sbjct: 287 RGQITAITGQNGAGKTTL---------ARCLCGLMKEQSGT-------------IFWDGK 324 Query: 692 PIGRTPRSNPATYTGVFTPVRELFAGVPESRAR 724 P+ RT R A + + +LF + R Sbjct: 325 PLSRTERRRKA-FLIMQDVNLQLFGDSVLAEIR 356 Score = 94.2 bits (233), Expect = 2e-17, Method: Composition-based stats. Identities = 34/117 (29%), Positives = 58/117 (49%), Gaps = 6/117 (5%) Query: 801 DAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPT 860 + + + L++++ V L +S LSGGE QR+ A + G L++LDEP+ Sbjct: 113 ASHDEMTQALESVVQVCGVGPLLERSIFALSGGEKQRIACASAWAM---GPELFVLDEPS 169 Query: 861 TGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDV-IKTADWIVDL--GPEGGSGGGE 914 + L I+QL ++L +L+ G T+++ EH L AD + L G G+ Sbjct: 170 SNLDGEGIRQLREILKQLKKGGKTVLMAEHRLWYAADLADRVFYLRSGQLEREYNGK 226 Score = 85.4 bits (210), Expect = 9e-15, Method: Composition-based stats. Identities = 32/107 (29%), Positives = 51/107 (47%), Gaps = 9/107 (8%) Query: 800 FDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEP 859 L TL + L LSGG+ QR+ +A +G+ L I DEP Sbjct: 357 LGNTATEQEALTTLGRMDLAQ-YADTHPMALSGGQKQRLAVADGC---FSGKELLIFDEP 412 Query: 860 TTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIK-----TADWI 901 T+GL + + ++ L +L +QG +VVI H+ + ++ TADW+ Sbjct: 413 TSGLDYGHMLEVSRRLRELAEQGLCVVVITHDGEFLRESGAWTADWL 459 Score = 71.9 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 33/157 (21%), Positives = 61/157 (38%), Gaps = 22/157 (14%) Query: 414 LRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIG--------D 465 ++ ++ ++ + PL A ++ L + +L EI + Sbjct: 312 MKEQSGTIFWDGKPLSRTERR--RKAFLIMQDVNL----QLFGDSVLAEIRLGNTATEQE 365 Query: 466 RLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNE 525 L L + L + LSGG+ QR+ +A +G + + DEP+ GL Sbjct: 366 ALTTLGRMDLAQYADTHPMA-LSGGQKQRLAVADGCFSG--KELLIFDEPTSGLDYGHML 422 Query: 526 RLLGTLIHLRDLGNTVIVVEHDEDAIR-----AADHV 557 + L L + G V+V+ HD + +R AD + Sbjct: 423 EVSRRLRELAEQGLCVVVITHDGEFLRESGAWTADWL 459 >UniRef50_Q5YXV6 Putative ABC transporter ATP-binding protein n=1 Tax=Nocardia farcinica RepID=Q5YXV6_NOCFA Length = 494 Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats. Identities = 71/273 (26%), Positives = 103/273 (37%), Gaps = 34/273 (12%) Query: 445 NLKLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAG 504 L A +RA++A+ + D + L R SGGE R+ LA + Sbjct: 107 RLPRAQRRARVAQILATAAFDVADADRDAVL-----RRYPFEFSGGERARLALAQVLAVR 161 Query: 505 LVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGA 564 + V+DEP++GL LL +L LR G +++V HD A RA D + + Sbjct: 162 --PDVLVIDEPTVGLDPIARAALLRSLATLRAQGAAILLVTHDPVAERAGDRTLYV---- 215 Query: 565 GVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEVPKKRVPANPEKVLKLTGA-----R 619 HGG +V E P E + + P K A VL+L G R Sbjct: 216 --HGGRIVEELPPEPVASEPG----------------GKPAAAPSAPVLRLRGVTVTLHR 257 Query: 620 GNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAEPAPYRDIQGL 679 L ++ L + G I GVSG+GKST+ +A R +P P + Sbjct: 258 RRILHEIDLAVRAGELLAILGVSGAGKSTIARCMAGLVAPRHGAVLLDDQPLPVLRRRSR 317 Query: 680 EHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVR 712 +V + Q P T VR Sbjct: 318 AQIAQVQYVWQESASSFDPRRPVLDQVAATAVR 350 Score = 91.1 bits (225), Expect = 2e-16, Method: Composition-based stats. Identities = 33/107 (30%), Positives = 48/107 (44%), Gaps = 9/107 (8%) Query: 823 LGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQG 882 L + SGGE R+ LA+ L+ R + ++DEPT GL LL L LR QG Sbjct: 137 LRRYPFEFSGGERARLALAQVLAVR---PDVLVIDEPTVGLDPIARAALLRSLATLRAQG 193 Query: 883 NTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEA 929 I+++ H+ + D + + GG I+ PE VA Sbjct: 194 AAILLVTHDPVAERAGDRTLYV------HGGRIVEELPPEPVASEPG 234 Score = 66.1 bits (160), Expect = 6e-09, Method: Composition-based stats. Identities = 38/177 (21%), Positives = 64/177 (36%), Gaps = 28/177 (15%) Query: 769 KRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQ-------------TLMD 815 +R + +++Y + + + + R D V A A +L+ TL D Sbjct: 314 RRSRAQIAQVQY----VWQESASSFDPRRPVLDQVAATAVRLRGLARDAARAEAADTLAD 369 Query: 816 VGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVL 875 +GL +L + LSGG+ QR + + DE TT L ++ L Sbjct: 370 LGLAAEQLLRRPAGLSGGQLQRAA---LARALLARPRVLLCDEITTALDEPTAARIHRHL 426 Query: 876 HKLRDQ-GNTIVVIEHNL-DVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEAS 930 R G IV I H+L + AD + G ++ G P + + Sbjct: 427 DAYRRHTGAAIVAIGHDLPGQLDRADRV------ALVDAGRLVDLGPPARLLAQPRT 477 Score = 54.2 bits (129), Expect = 3e-05, Method: Composition-based stats. Identities = 31/119 (26%), Positives = 47/119 (39%), Gaps = 10/119 (8%) Query: 470 LVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLG 529 L ++GL L R LSGG+ QR + + DE + L + R+ Sbjct: 367 LADLGLAAEQLLRRPAGLSGGQLQRAA--LARALLARPRVLLCDEITTALDEPTAARIHR 424 Query: 530 TLIHLRD-LGNTVIVVEHD-EDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPES 586 L R G ++ + HD + AD V A V G +V GP ++A P + Sbjct: 425 HLDAYRRHTGAAIVAIGHDLPGQLDRADRV------ALVDAGRLVDLGPPARLLAQPRT 477 >UniRef50_D1C296 ABC transporter related protein n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C296_SPHTD Length = 546 Score = 128 bits (321), Expect = 1e-27, Method: Composition-based stats. Identities = 80/307 (26%), Positives = 117/307 (38%), Gaps = 94/307 (30%) Query: 623 LKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAEPAPYRDIQGLEHF 682 L +T + G +T + G SG+GKSTL+ R LNG Sbjct: 19 LSAITEEMAPGSYTVVAGPSGAGKSTLL---------RALNGLV---------------- 53 Query: 683 DKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESRARGYTPGRFSFNVRGGRCEA 742 P Y GVF R L G+ R + GR V G E Sbjct: 54 ------------------PHFYGGVFGG-RVLVQGIDTRRVQPADLGRIVGFV-GQDPER 93 Query: 743 CQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDA 802 ++ E+ F P+ Y G HE+ + +EEA + Sbjct: 94 QTVMDRVEDEIAFGPENY---------------------GLPRHEI-RLRVEEALDLLGI 131 Query: 803 VPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTG 862 P R++ +LSGGE QRV +A ++ R + LDEPT+ Sbjct: 132 APLRDREI-----------------ASLSGGERQRVVIAAAMAMR---PPVLALDEPTSQ 171 Query: 863 LHFADIQQLLDVLHKLR-DQGNTIVVIEHNLDV-IKTADWIVDLGPEGGSGGGEILVSGT 920 L + +L VL +L D G T+V+ EH LD + +A+ ++ LG + G I+ SG Sbjct: 172 LDPWSAEAVLSVLDRLHADLGTTVVIAEHRLDRVLPSAERVLLLGSD-----GSIVASGP 226 Query: 921 PETVAEC 927 P +VA Sbjct: 227 PRSVAAA 233 Score = 123 bits (310), Expect = 2e-26, Method: Composition-based stats. Identities = 66/246 (26%), Positives = 104/246 (42%), Gaps = 38/246 (15%) Query: 462 EIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQ 521 EI R++ +++ R +LSGGE QR+ +A+ + + + LDEP+ L Sbjct: 117 EIRLRVEEALDLLGIAPLRDREIASLSGGERQRVVIAAAMA--MRPPVLALDEPTSQLDP 174 Query: 522 RDNERLLGTLIHLR-DLGNTVIVVEHDED-AIRAADHVIDIGPGAGVHGGEVVAEGPLEA 579 E +L L L DLG TV++ EH D + +A+ V+ +G G +VA GP + Sbjct: 175 WSAEAVLSVLDRLHADLGTTVVIAEHRLDRVLPSAERVLLLG-----SDGSIVASGPPRS 229 Query: 580 IMAV-----------------PESLT---GQYMSGKRKIEV-PKKRVPANPEKVLKLTGA 618 + A P LT G+ ++ V P A + VL++ G Sbjct: 230 VAAALQYPPPLVRLGLALGWDPLPLTVREGRRLAQSMPPPVTPLNDPSAGGDVVLEVQGV 289 Query: 619 R-----GNNLKDVTLTLPVGLFTCITGVSGSGKSTL---INDTLFPIAQRQLNGATIAEP 670 L+DV+ G T + G +G+GK+TL +N L P A R L Sbjct: 290 TFRYGERTTLRDVSAVFREGTVTALMGRNGAGKTTLLKHLNGLLRPAAGRILLRGQDIAG 349 Query: 671 APYRDI 676 D+ Sbjct: 350 TATPDL 355 Score = 85.4 bits (210), Expect = 9e-15, Method: Composition-based stats. Identities = 42/187 (22%), Positives = 68/187 (36%), Gaps = 21/187 (11%) Query: 414 LRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDRLKFL--- 470 LR A + + + + L E + E+ L+ L Sbjct: 333 LRPAAGRILLRGQDIAGTAT---PDLARTVAYLPQNPSAMLFNETVAAEVRFTLRALGLP 389 Query: 471 ------VNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDN 524 + + +R+ LS GE QR+ + +LDEP+ GL Sbjct: 390 GDVGPALEMAGVAHLAARNPRDLSTGERQRVA--LAAVLASAPAVLLLDEPTRGLDGEAR 447 Query: 525 ERLLGTLIHLRDLGNTVIVVEHDEDAIRA-ADHVIDIGPGAGVHGGEVVAEGPLEAIMAV 583 ERL+ L L +G V++ HD + AD V+ +G GEVVA+GP ++ Sbjct: 448 ERLIALLRRLAGIGTCVVMATHDVELAAVCADRVLLLGD------GEVVADGPPRQVLTG 501 Query: 584 PESLTGQ 590 + Q Sbjct: 502 SLTYATQ 508 Score = 82.3 bits (202), Expect = 7e-14, Method: Composition-based stats. Identities = 30/121 (24%), Positives = 56/121 (46%), Gaps = 11/121 (9%) Query: 812 TLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQL 871 L G+ ++ ++ LS GE QRV + + + +LDEPT GL ++L Sbjct: 395 ALEMAGVAHL-AARNPRDLSTGERQRVA---LAAVLASAPAVLLLDEPTRGLDGEARERL 450 Query: 872 LDVLHKLRDQGNTIVVIEHNLDVIKTA-DWIVDLGPEGGSGGGEILVSGTPETVAECEAS 930 + +L +L G +V+ H++++ D ++ LG GE++ G P V + Sbjct: 451 IALLRRLAGIGTCVVMATHDVELAAVCADRVLLLGD------GEVVADGPPRQVLTGSLT 504 Query: 931 H 931 + Sbjct: 505 Y 505 >UniRef50_A7MK51 Putative uncharacterized protein n=1 Tax=Cronobacter sakazakii ATCC BAA-894 RepID=A7MK51_ENTS8 Length = 449 Score = 127 bits (319), Expect = 2e-27, Method: Composition-based stats. Identities = 53/198 (26%), Positives = 87/198 (43%), Gaps = 27/198 (13%) Query: 476 NYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLR 535 + LSGG QR+ +AS I + + DEP+ L ++LG L L+ Sbjct: 51 PEKRARQYIHQLSGGMRQRVMIASAISGK--PDLLIADEPTTALDVTLQAQILGLLKDLQ 108 Query: 536 -DLGNTVIVVEHDEDAI-RAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPES-LTGQYM 592 ++G V++V HD + R AD ++GGE+V +GP+E + P++ T + + Sbjct: 109 QEMGMGVLLVTHDLSVVARYADR------ACVMNGGEIVEQGPVEPLFTSPQADWTRRLI 162 Query: 593 SGKRKIEVPKKRVPANPEKVLKLTGA----------------RGNNLKDVTLTLPVGLFT 636 + E P + V N +L++TG R L T ++ G Sbjct: 163 AASTPQEPPARVVARNDTPLLQVTGIVKSFARRARLPFMPAERQRVLHPTTFSVARGEIV 222 Query: 637 CITGVSGSGKSTLINDTL 654 + G SGSGK+TL + Sbjct: 223 GLIGESGSGKTTLGRAAI 240 Score = 100 bits (250), Expect = 2e-19, Method: Composition-based stats. Identities = 34/132 (25%), Positives = 57/132 (43%), Gaps = 11/132 (8%) Query: 807 ARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFA 866 R + + VGL + SGG+ QR+ +AR L+ L + DE L Sbjct: 310 ERVSELMTLVGLKPEWAQRRPAAFSGGQRQRIAIARALA---LEPELLVADEAVAALDLP 366 Query: 867 DIQQLLDVLHKLRDQ-GNTIVVIEHNLDVIK-TADWIVDLGPEGGSGGGEILVSGTPETV 924 Q+L +L +LRD+ G +++ I H+L ++ D ++ L G ++ G V Sbjct: 367 VRGQILRLLAELRDKLGLSVLFISHDLQAVRQLCDRVLVL------YLGNVVEEGPTRQV 420 Query: 925 AECEASHTARFL 936 + A R L Sbjct: 421 LQTPAHAYTRRL 432 Score = 93.5 bits (231), Expect = 4e-17, Method: Composition-based stats. Identities = 53/192 (27%), Positives = 83/192 (43%), Gaps = 21/192 (10%) Query: 412 TRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDRLKFLV 471 R+RR A+ ++ + MS+G + L++ G R A I +R+ L+ Sbjct: 266 KRVRRRAQMIFQDPYASLD-PRMSVGDQLA--EPLRVHGLRHGAA------IAERVSELM 316 Query: 472 N-VGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGT 530 VGL R SGG+ QRI +A + L + V DE L ++L Sbjct: 317 TLVGLKPEWAQRRPAAFSGGQRQRIAIARALA--LEPELLVADEAVAALDLPVRGQILRL 374 Query: 531 LIHLRD-LGNTVIVVEHDEDAIR-AADHVIDIGPGAGVHGGEVVAEGPLEAIMAVP-ESL 587 L LRD LG +V+ + HD A+R D V+ + + G VV EGP ++ P + Sbjct: 375 LAELRDKLGLSVLFISHDLQAVRQLCDRVLVL------YLGNVVEEGPTRQVLQTPAHAY 428 Query: 588 TGQYMSGKRKIE 599 T + + I Sbjct: 429 TRRLIDSAPDIH 440 Score = 91.5 bits (226), Expect = 1e-16, Method: Composition-based stats. Identities = 44/156 (28%), Positives = 65/156 (41%), Gaps = 18/156 (11%) Query: 778 IKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTY--IRLGQSATTLSGGEA 835 + G+ I EVL A + L VG+ R Q LSGG Sbjct: 13 VLKVGEQIAEVL-----VRHRGLGWKAASREAVALLGHVGIGEPEKRARQYIHQLSGGMR 67 Query: 836 QRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQ-GNTIVVIEHNLDV 894 QRV +A +S + L I DEPTT L Q+L +L L+ + G ++++ H+L V Sbjct: 68 QRVMIASAISGK---PDLLIADEPTTALDVTLQAQILGLLKDLQQEMGMGVLLVTHDLSV 124 Query: 895 I-KTADWIVDLGPEGGSGGGEILVSGTPETVAECEA 929 + + AD + GGEI+ G E + Sbjct: 125 VARYADRACVMN------GGEIVEQGPVEPLFTSPQ 154 >UniRef50_B9KXK3 ABC transporter, ATP-binding protein n=1 Tax=Thermomicrobium roseum DSM 5159 RepID=B9KXK3_THERP Length = 554 Score = 126 bits (318), Expect = 3e-27, Method: Composition-based stats. Identities = 99/472 (20%), Positives = 163/472 (34%), Gaps = 87/472 (18%) Query: 463 IGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQR 522 + R++ +++ +R ETLSGGE QR+ LAS + ++ DEP+ L Sbjct: 118 VAARVEEALDLLGLAHLRNRPIETLSGGERQRLTLASVLALRPQLLLL--DEPTSQLDPW 175 Query: 523 DNERLLGTLIHLRD-LGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIM 581 E +L L L D LG T+++ EH D + + + + + G++VA+G + + Sbjct: 176 SAETVLEVLRRLVDELGITLVIAEHRLDRLLGSCTRLTL-----LEDGKIVADGSPQHVA 230 Query: 582 AVPESLTGQYMSGKRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGV 641 I V R+ L + + L+ L PV Sbjct: 231 ER---------LPDPPILVQVSRLLGWSPPALSVAEGKRR-LRGCQLLSPVQR------P 274 Query: 642 SGS-GKSTLINDTLFPIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSN 700 + S G + L + + +L + + G+ +GR Sbjct: 275 APSPGPTPLALERIACRRGERLVLEDVTLEVARGLVTGI-------------VGRNG--- 318 Query: 701 PATYTGVFTPVRELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIY 760 +G T +R R R + GGR + ++P Sbjct: 319 ----SGKTTLLRAALGLEGIVRGRVW---------LGGRPVHETLRAGESGSIAYVPQ-- 363 Query: 761 VPCDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTY 820 P G R + + + +V ++E + F+ P Sbjct: 364 YPGALLVGSRLRDDLELVA----RVRQVSTTAVDEIVDLFELHP---------------- 403 Query: 821 IRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRD 880 L LS GE QR LA L+ L +LDEPT GL Q+L L + Sbjct: 404 -LLDTHPADLSSGERQRAALAVALTGH---PALIVLDEPTRGLGLRLKQRLASELRRRAA 459 Query: 881 QGNTIVVIEHNLDVIKT-ADWIVDLGPEGGSGGGEILVSGTPETVAECEASH 931 G +++ H++D AD IV L G I+ G P V S+ Sbjct: 460 AGAAVLLTTHDVDFAAMVADRIVLLSE------GRIVNEGPPHLVLGESFSY 505 Score = 93.1 bits (230), Expect = 5e-17, Method: Composition-based stats. Identities = 45/128 (35%), Positives = 68/128 (53%), Gaps = 10/128 (7%) Query: 800 FDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEP 859 F AR + L +GL ++R + TLSGGE QR+ LA L+ R L DEP Sbjct: 113 FPPRVVAARVEEALDLLGLAHLR-NRPIETLSGGERQRLTLASVLALRPQLLLL---DEP 168 Query: 860 TTGLHFADIQQLLDVLHKLRDQ-GNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVS 918 T+ L + +L+VL +L D+ G T+V+ EH LD + + + L + G+I+ Sbjct: 169 TSQLDPWSAETVLEVLRRLVDELGITLVIAEHRLDRLLGSCTRLTLLED-----GKIVAD 223 Query: 919 GTPETVAE 926 G+P+ VAE Sbjct: 224 GSPQHVAE 231 Score = 73.8 bits (180), Expect = 3e-11, Method: Composition-based stats. Identities = 39/145 (26%), Positives = 61/145 (42%), Gaps = 16/145 (11%) Query: 444 NNLKLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGA 503 ++L+L + +++ + EI D + + L LS GE QR LA + Sbjct: 376 DDLELVARVRQVSTTAVDEIVDLFEL-------HPLLDTHPADLSSGERQRAALAVALTG 428 Query: 504 GLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDED-AIRAADHVIDIGP 562 + VLDEP+ GL R +RL L G V++ HD D A AD ++ + Sbjct: 429 H--PALIVLDEPTRGLGLRLKQRLASELRRRAAAGAAVLLTTHDVDFAAMVADRIVLLSE 486 Query: 563 GAGVHGGEVVAEGPLEAIMAVPESL 587 G +V EGP ++ S Sbjct: 487 ------GRIVNEGPPHLVLGESFSY 505 >UniRef50_A6UGQ4 ABC transporter related n=7 Tax=Proteobacteria RepID=A6UGQ4_SINMW Length = 546 Score = 126 bits (317), Expect = 3e-27, Method: Composition-based stats. Identities = 60/262 (22%), Positives = 95/262 (36%), Gaps = 36/262 (13%) Query: 467 LKFLVNVGLNY--LTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDN 524 + L VG+ + + SGG+ QRI + I L + + DEP+ L Sbjct: 136 IDILRRVGIPEPEKRIDQYPHQFSGGQRQRIMIGMAIA--LRPEILIADEPTTALDVSVQ 193 Query: 525 ERLLGTLIHLRDL-GNTVIVVEHDEDAIR-AADHVIDIGPGAGVHGGEVVAEGPLEAIMA 582 ++L L L+ G +I++ HD + AD VI + G +V EG A+ Sbjct: 194 AQILELLKKLQAEDGLAIIMITHDLEVAANMADRVIVM------KSGRIVEEGEARAVFE 247 Query: 583 VP-ESLTGQYMSG--KRKIEVPKKRVPANPEKVLKLTG---------------ARGNNLK 624 P + T ++ E P KR + +L++ AR + +K Sbjct: 248 NPAHTYTRTLINALPHGDHEAPPKRGRPAGKPILEVRNIDKFYTLSSGFFAKPARLHAVK 307 Query: 625 DVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAEPAPYRDIQGLEHF-- 682 ++ + G I G SGSGKST+ L G + + E Sbjct: 308 KLSFDVAAGETIGIVGESGSGKSTVARVLLG--LNEASGGEALFHGRDILKMDRKELLAF 365 Query: 683 -DKVIDIDQSPIGR-TPRSNPA 702 KV + Q P PR Sbjct: 366 RRKVQMVFQDPYSSMNPRMTVL 387 Score = 108 bits (271), Expect = 9e-22, Method: Composition-based stats. Identities = 41/136 (30%), Positives = 63/136 (46%), Gaps = 13/136 (9%) Query: 805 ALARKLQTLMDVGLTY--IRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTG 862 A R + L VG+ R+ Q SGG+ QR+ + ++ R + I DEPTT Sbjct: 131 ARQRAIDILRRVGIPEPEKRIDQYPHQFSGGQRQRIMIGMAIALR---PEILIADEPTTA 187 Query: 863 LHFADIQQLLDVLHKL-RDQGNTIVVIEHNLDV-IKTADWIVDLGPEGGSGGGEILVSGT 920 L + Q+L++L KL + G I++I H+L+V AD ++ + G I+ G Sbjct: 188 LDVSVQAQILELLKKLQAEDGLAIIMITHDLEVAANMADRVIVM------KSGRIVEEGE 241 Query: 921 PETVAECEASHTARFL 936 V E A R L Sbjct: 242 ARAVFENPAHTYTRTL 257 Score = 106 bits (264), Expect = 6e-21, Method: Composition-based stats. Identities = 37/156 (23%), Positives = 67/156 (42%), Gaps = 11/156 (7%) Query: 783 KTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLAR 842 T+ +++ ++ + R + L VGL + SGG+ QR+ +AR Sbjct: 384 MTVLDIVSEPWRIHKDILEKPRWRDRVTELLGLVGLNPEHAARYPHQFSGGQRQRIAIAR 443 Query: 843 ELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQ-GNTIVVIEHNLDVIKT-ADW 900 L+ L + DE + L + Q++ +L +LRD+ G + I H+L +++ AD Sbjct: 444 ALA---CDPELVVCDEAVSALDVSVQVQVIGLLAELRDRLGLAYIFITHDLPIVRHFADR 500 Query: 901 IVDLGPEGGSGGGEILVSGTPETVAECEASHTARFL 936 I+ + GEI+ T E + R L Sbjct: 501 IIVM------KSGEIVEHATTEEIFRSPQHAYTRQL 530 Score = 91.1 bits (225), Expect = 2e-16, Method: Composition-based stats. Identities = 45/158 (28%), Positives = 69/158 (43%), Gaps = 14/158 (8%) Query: 446 LKLAGQRAKIAEKILKE--IGDRLKFLVN-VGLNYLTLSRSAETLSGGEAQRIRLASQIG 502 L + + +I + IL++ DR+ L+ VGLN +R SGG+ QRI +A + Sbjct: 387 LDIVSEPWRIHKDILEKPRWRDRVTELLGLVGLNPEHAARYPHQFSGGQRQRIAIARALA 446 Query: 503 AGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDL-GNTVIVVEHDEDAIRA-ADHVIDI 560 + V DE L +++G L LRD G I + HD +R AD +I + Sbjct: 447 C--DPELVVCDEAVSALDVSVQVQVIGLLAELRDRLGLAYIFITHDLPIVRHFADRIIVM 504 Query: 561 GPGAGVHGGEVVAEGPLEAIMAVP-ESLTGQYMSGKRK 597 GE+V E I P + T Q ++ K Sbjct: 505 K------SGEIVEHATTEEIFRSPQHAYTRQLINATPK 536 >UniRef50_A1A2V8 Similar to glutamine ABC transporter (ATP-binding protein) n=2 Tax=Bacteria RepID=A1A2V8_BIFAA Length = 255 Score = 126 bits (317), Expect = 3e-27, Method: Composition-based stats. Identities = 51/190 (26%), Positives = 85/190 (44%), Gaps = 25/190 (13%) Query: 765 QCKGKRYNRETLEIK------------YKGKTIHEVLDMTIEEAREFFDAVPALARKLQT 812 GK N++ LE++ +K KT+ + + + R A R L+ Sbjct: 75 DFSGKVPNKQILELRRKTAMVFQNYNLFKNKTVLDNVTQGLTVVRGV-AKNEARERALKA 133 Query: 813 LMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLL 872 L VG+ + LSGG+ QRV +AR L+ R + +LDEPT+ L + + Sbjct: 134 LSSVGMDGYE-DRYPVQLSGGQQQRVSIARALAIR---PDVILLDEPTSALDPELVSDVN 189 Query: 873 DVLHKLRDQGNTIVVIEHNLDVIK-TADWIVDLGPEGGSGGGEILVSGTPETVAECEASH 931 DV+ K+ G T++++ H + + A +V + G I+ GTPE V + S Sbjct: 190 DVITKVAGTGVTMILVTHEIRFARNVASRVVFVEQ------GNIIEEGTPEQVIDNPQSP 243 Query: 932 TAR-FLKPML 940 + FL M+ Sbjct: 244 RIKEFLSKMM 253 Score = 94.2 bits (233), Expect = 2e-17, Method: Composition-based stats. Identities = 43/191 (22%), Positives = 74/191 (38%), Gaps = 28/191 (14%) Query: 415 RREARHVYVENTPLP---AISDMSIGHAME----FFNNLKL----------AGQRAKIAE 457 R +A V V+ T + + + I F N L + Sbjct: 61 RPDAGIVRVDGTTIDFSGKVPNKQILELRRKTAMVFQNYNLFKNKTVLDNVTQGLTVVRG 120 Query: 458 KILKEIGDR-LKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPS 516 E +R LK L +VG++ R LSGG+ QR+ +A + + + +LDEP+ Sbjct: 121 VAKNEARERALKALSSVGMD-GYEDRYPVQLSGGQQQRVSIARALA--IRPDVILLDEPT 177 Query: 517 IGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIR-AADHVIDIGPGAGVHGGEVVAEG 575 L + + + G T+I+V H+ R A V+ + G ++ EG Sbjct: 178 SALDPELVSDVNDVITKVAGTGVTMILVTHEIRFARNVASRVVFV------EQGNIIEEG 231 Query: 576 PLEAIMAVPES 586 E ++ P+S Sbjct: 232 TPEQVIDNPQS 242 Score = 48.4 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 19/49 (38%), Positives = 23/49 (46%), Gaps = 5/49 (10%) Query: 608 NPEKVLKLTGARG-----NNLKDVTLTLPVGLFTCITGVSGSGKSTLIN 651 E V+ L G R LK V L + G I G SGSGK+TL+ Sbjct: 6 TGETVVSLKGIRKSFSGNEILKGVDLEVRKGEVLAILGPSGSGKTTLLR 54 >UniRef50_A6CYT5 ABC transporter-like protein n=1 Tax=Vibrio shilonii AK1 RepID=A6CYT5_9VIBR Length = 502 Score = 126 bits (317), Expect = 4e-27, Method: Composition-based stats. Identities = 56/285 (19%), Positives = 108/285 (37%), Gaps = 36/285 (12%) Query: 431 ISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDR-LKFLVNVGLNYLTLSRSAETLSG 489 ++ + + NL L ++++ I ++ DR ++ L + + +R TL Sbjct: 90 FQELHVVDELTVLENLTLGMEQSRFGFLIKSDLEDRVIETLATIEPSIDPYAR-VSTLGV 148 Query: 490 GEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDED 549 + Q I +A +G + ++DEP+ L +R+ ERL + L++ TVI + H Sbjct: 149 AQKQIIEIARAASSG--ANVIIMDEPTAALSEREVERLFTVIRRLQEQSVTVIYISHKL- 205 Query: 550 AIRAADHVIDIGPGA-GVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEVPKKRVPAN 608 D ++ +G + G+ +A P+ + E + M G+ + R Sbjct: 206 -----DEILTLGDRVTVMRDGKHIATKPMSEVDGRAELI--DMMIGRSIMHDYSPRDAIT 258 Query: 609 PEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIA 668 E L + LKDV+ + G G+ G+GK+ + Sbjct: 259 DEVFLAAQRLNNHRLKDVSFDIKKGEIVGFYGLVGAGKTEIA------------------ 300 Query: 669 EPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRE 713 R I G + I ++ +G +PR A + R Sbjct: 301 -----RAIFGADKVSGTIRLNGKDVGNSPREAIAAGIALVPEERR 340 Score = 76.9 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 31/126 (24%), Positives = 63/126 (50%), Gaps = 6/126 (4%) Query: 784 TIHEVLDMTIEEAR-EFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLAR 842 T+ E L + +E++R F R ++TL + + + +TL + Q +++AR Sbjct: 100 TVLENLTLGMEQSRFGFLIKSDLEDRVIETLATIEPSIDPYAR-VSTLGVAQKQIIEIAR 158 Query: 843 ELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLD-VIKTADWI 901 +G + I+DEPT L ++++L V+ +L++Q T++ I H LD ++ D + Sbjct: 159 A---ASSGANVIIMDEPTAALSEREVERLFTVIRRLQEQSVTVIYISHKLDEILTLGDRV 215 Query: 902 VDLGPE 907 + Sbjct: 216 TVMRDG 221 Score = 75.4 bits (184), Expect = 1e-11, Method: Composition-based stats. Identities = 30/129 (23%), Positives = 58/129 (44%), Gaps = 7/129 (5%) Query: 780 YKGKTIHE---VLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQ 836 + TI E V+++ F L + + + + + + LSGG Q Sbjct: 345 FTNLTIRENIPVMNLPRMSDFGVFRENDELNAAIDYVDKLSIATSSIEKHTEKLSGGNQQ 404 Query: 837 RVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNL-DVI 895 +V +A+ L + L +LDEPT G+ +++ D++ L ++GN++ V L +++ Sbjct: 405 KVVIAKCLFSQA---KLLLLDEPTRGVDVGAKKEIYDLVKSLANEGNSVAVFSTELEEIL 461 Query: 896 KTADWIVDL 904 D I L Sbjct: 462 GVCDRIFLL 470 Score = 73.4 bits (179), Expect = 3e-11, Method: Composition-based stats. Identities = 21/107 (19%), Positives = 50/107 (46%), Gaps = 3/107 (2%) Query: 461 KEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLH 520 E+ + ++ + + ++ + E LSGG Q++ +A + + + +LDEP+ G+ Sbjct: 372 DELNAAIDYVDKLSIATSSIEKHTEKLSGGNQQKVVIAKCLFSQ--AKLLLLDEPTRGVD 429 Query: 521 QRDNERLLGTLIHLRDLGNTV-IVVEHDEDAIRAADHVIDIGPGAGV 566 + + + L + GN+V + E+ + D + + G+ V Sbjct: 430 VGAKKEIYDLVKSLANEGNSVAVFSTELEEILGVCDRIFLLYDGSLV 476 >UniRef50_B5I5X3 Phosphate ABC transporter n=1 Tax=Streptomyces sviceus ATCC 29083 RepID=B5I5X3_9ACTO Length = 313 Score = 126 bits (317), Expect = 4e-27, Method: Composition-based stats. Identities = 44/141 (31%), Positives = 68/141 (48%), Gaps = 12/141 (8%) Query: 801 DAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPT 860 AL R + L VG+ + LG+ LSGGE QRV +AR L+ L + DEPT Sbjct: 179 PEQEALERAVTLLRRVGVAHRALGRP-EQLSGGEQQRVAIARALA---LKPELLLFDEPT 234 Query: 861 TGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVI-KTADWIVDLGPEGGSGGGEILVSG 919 + L +++L V+ +L G T++++ H L + +D +V + GG I+ G Sbjct: 235 SSLDPEATREVLSVMRELAADGMTMLLVTHELPFAREVSDHVVFVD------GGRIVEEG 288 Query: 920 TPETVAECE-ASHTARFLKPM 939 PE V + + T FL Sbjct: 289 RPEDVLDSPSQARTQEFLASY 309 Score = 109 bits (272), Expect = 7e-22, Method: Composition-based stats. Identities = 49/179 (27%), Positives = 79/179 (44%), Gaps = 21/179 (11%) Query: 413 RLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDRLKFLVN 472 RLRR V+ P ++ N+ LA ++A I E+ + + + L Sbjct: 145 RLRRTVGMVFQRFNLFPHLTA---------VENVVLAQRKAGIPEQ--EALERAVTLLRR 193 Query: 473 VGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLI 532 VG+ + L R E LSGGE QR+ +A + L + + DEP+ L +L + Sbjct: 194 VGVAHRALGRP-EQLSGGEQQRVAIARALA--LKPELLLFDEPTSSLDPEATREVLSVMR 250 Query: 533 HLRDLGNTVIVVEHDEDAIR-AADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQ 590 L G T+++V H+ R +DHV+ + GG +V EG E ++ P Q Sbjct: 251 ELAADGMTMLLVTHELPFAREVSDHVVFV------DGGRIVEEGRPEDVLDSPSQARTQ 303 >UniRef50_A3DHQ3 ABC transporter related protein n=10 Tax=Firmicutes RepID=A3DHQ3_CLOTH Length = 274 Score = 126 bits (317), Expect = 4e-27, Method: Composition-based stats. Identities = 39/144 (27%), Positives = 70/144 (48%), Gaps = 14/144 (9%) Query: 801 DAVPALAR--KLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDE 858 + + A AR ++ L +GL + +TLSGG+ QR+ + R L+ + + DE Sbjct: 141 EKIKADARENAMRLLKRIGL-EDKADVYPSTLSGGQKQRIAIIRALAM---NPKVILFDE 196 Query: 859 PTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVI-KTADWIVDLGPEGGSGGGEILV 917 PT+ L + ++LD++ +L D+G T+V++ H + + A ++ + G IL Sbjct: 197 PTSALDPEMVGEVLDLIRQLADEGITMVIVTHEMGFAREVATRVLFMDD------GRILE 250 Query: 918 SGTPETVAECE-ASHTARFLKPML 940 TPE + T FL +L Sbjct: 251 DNTPEEIFSNPQNPRTREFLSKVL 274 Score = 99.2 bits (246), Expect = 7e-19, Method: Composition-based stats. Identities = 34/175 (19%), Positives = 70/175 (40%), Gaps = 17/175 (9%) Query: 426 TPLPAISDMSIGHAMEFFNNLKLAGQRAKIAE------KILKEIGDRLKFLVNVGLNYLT 479 + ++ M + F N+ + ++ + E KI + + L+ Sbjct: 105 LGIHDLNVMKFKNFFIKFRNI-FSKEKKPLYEINTTREKIKADARENAMRLLKRIGLEDK 163 Query: 480 LSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGN 539 TLSGG+ QRI + + + + + DEP+ L +L + L D G Sbjct: 164 ADVYPSTLSGGQKQRIAIIRALA--MNPKVILFDEPTSALDPEMVGEVLDLIRQLADEGI 221 Query: 540 TVIVVEHDEDAIR-AADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESL-TGQYM 592 T+++V H+ R A V+ + G ++ + E I + P++ T +++ Sbjct: 222 TMVIVTHEMGFAREVATRVLFM------DDGRILEDNTPEEIFSNPQNPRTREFL 270 >UniRef50_Q6NK67 Putative membrane protein n=1 Tax=Corynebacterium diphtheriae RepID=Q6NK67_CORDI Length = 244 Score = 126 bits (317), Expect = 4e-27, Method: Composition-based stats. Identities = 46/181 (25%), Positives = 85/181 (46%), Gaps = 15/181 (8%) Query: 752 EMHFLPDIYVPCDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKL- 810 E+ F + C G ++ Y T+ +V+ M + +F + ++L Sbjct: 66 EVEFFGESLAACRNRVGYMPQSADVDWDY-PITVRQVVQMGLFPRVGWFKRLSGEHKELV 124 Query: 811 -QTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQ 869 +L VG+ + + + LSGG+ +RV +AR L+++ +Y+LDEP G+ A + Sbjct: 125 DASLARVGIADL-AKRHISELSGGQRRRVFVARILAQQ---PDIYLLDEPFAGVDAASEK 180 Query: 870 QLLDVLHKLRDQGNTIVVIEHNLDVI-KTADWIVDLGPEGGSGGGEILVSGTPETVAECE 928 + VLH+LRD G ++V++ H+L + + D + + E+L SG V E Sbjct: 181 VIRGVLHELRDAGKSVVIVHHDLSTVEELCDHVTIINR-------EVLASGPVSEVFTRE 233 Query: 929 A 929 Sbjct: 234 T 234 Score = 88.5 bits (218), Expect = 1e-15, Method: Composition-based stats. Identities = 40/170 (23%), Positives = 66/170 (38%), Gaps = 26/170 (15%) Query: 416 REARHVYVENTPLP--AISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNV 473 ++ V + P+ + M + + +F L + A I D Sbjct: 85 PQSADVDWD-YPITVRQVVQMGLFPRVGWFKRLSGEHKELVDASLARVGIAD-------- 135 Query: 474 GLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIH 533 R LSGG+ +R+ +A + +Y+LDEP G+ + + G L Sbjct: 136 -----LAKRHISELSGGQRRRVFVARILAQQ--PDIYLLDEPFAGVDAASEKVIRGVLHE 188 Query: 534 LRDLGNTVIVVEHDEDAI-RAADHVIDIGPGAGVHGGEVVAEGPLEAIMA 582 LRD G +V++V HD + DHV I EV+A GP+ + Sbjct: 189 LRDAGKSVVIVHHDLSTVEELCDHVTIINR-------EVLASGPVSEVFT 231 >UniRef50_A9WT53 ABC transporter ATP-binding protein n=1 Tax=Renibacterium salmoninarum ATCC 33209 RepID=A9WT53_RENSM Length = 231 Score = 126 bits (317), Expect = 4e-27, Method: Composition-based stats. Identities = 43/132 (32%), Positives = 66/132 (50%), Gaps = 11/132 (8%) Query: 805 ALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLH 864 A AR L+ L VGL R LSGG+ QRV +AR L+ + + DEPT+ L Sbjct: 73 AQARALELLDRVGL-KDRAQAYPRQLSGGQQQRVAIARSLA---LEPKVLLFDEPTSALD 128 Query: 865 FADIQQLLDVLHKLRDQGNTIVVIEHNLDVI-KTADWIVDLGPEGGSGGGEILVSGTPET 923 ++++LDV+ L G T++++ H + + AD IV + G I+ GTP+ Sbjct: 129 PELVKEVLDVIKDLARSGKTLIIVSHEIGFAREIADRIVFMDD------GRIIDQGTPQH 182 Query: 924 VAECEASHTARF 935 + EA A+ Sbjct: 183 LFSTEAHPRAQA 194 Score = 99.6 bits (247), Expect = 5e-19, Method: Composition-based stats. Identities = 30/135 (22%), Positives = 56/135 (41%), Gaps = 16/135 (11%) Query: 450 GQRAKIAEKILKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVM 509 GQ +A+ E+ DR+ LSGG+ QR+ +A + L + Sbjct: 67 GQSKAVAQARALELLDRVGLKDRAQA-------YPRQLSGGQQQRVAIARSLA--LEPKV 117 Query: 510 YVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIR-AADHVIDIGPGAGVHG 568 + DEP+ L + +L + L G T+I+V H+ R AD ++ + Sbjct: 118 LLFDEPTSALDPELVKEVLDVIKDLARSGKTLIIVSHEIGFAREIADRIVFM------DD 171 Query: 569 GEVVAEGPLEAIMAV 583 G ++ +G + + + Sbjct: 172 GRIIDQGTPQHLFST 186 >UniRef50_B6A1Z5 ABC transporter related n=17 Tax=Bacteria RepID=B6A1Z5_RHILW Length = 583 Score = 126 bits (316), Expect = 6e-27, Method: Composition-based stats. Identities = 66/324 (20%), Positives = 115/324 (35%), Gaps = 44/324 (13%) Query: 414 LRREARHVY-VENTPLPAISDMSIGHA-------MEFFNNLKLAGQRAKIAEKILKEIGD 465 L R + + + I + + L+L + +K + + Sbjct: 92 LNPRGRQIRAIRGRDIAMIFQEPMSSLSPIHTVGNQIVEALRLHTRMSKAEAR-----AE 146 Query: 466 RLKFLVNVGLN--YLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRD 523 + L V + L R A SGG QR +A + + + DEP+ L Sbjct: 147 AISLLKQVEIPAPEKALDRYAFQYSGGMRQRAMIAMALACK--PQLLIADEPTTALDVTT 204 Query: 524 NERLLGTLIHL-RDLGNTVIVVEHDEDAI-RAADHVIDIGPGAGVHGGEVVAEGPLEAIM 581 +L + L + G V+ + HD + + AD V+ + H G GP+E I Sbjct: 205 QAEILDLIARLQKANGMAVLFITHDMGVVAQIADDVLVM------HNGVAKEYGPVEQIF 258 Query: 582 AVPESLTGQYMSG-------KRKIEVPKKRVPANPEKVLKLTGARGN-----NLKDVTLT 629 P+ + + G K +I + + + +L+L + L DV+++ Sbjct: 259 HAPQDDYTRMLIGSVLKLEQKAEIRLARPPLDRTKAPILELRNVSMDFGEVKALDDVSIS 318 Query: 630 LPVGLFTCITGVSGSGKSTL---INDTLFPIAQRQLNGATIAEPAPYRDIQG---LEHFD 683 L G I G SGSGK+T+ I + P A L + +G Sbjct: 319 LLPGETLGIVGESGSGKTTMGRSIMRLIDPTAGEILYRNAGGDIIDLATAKGQTLAAARR 378 Query: 684 KVIDIDQSPIGR-TPRSNPATYTG 706 ++ + Q P G PR + G Sbjct: 379 ELRMVFQDPFGSLNPRMTVSQIIG 402 Score = 95.0 bits (235), Expect = 1e-17, Method: Composition-based stats. Identities = 33/132 (25%), Positives = 57/132 (43%), Gaps = 11/132 (8%) Query: 807 ARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFA 866 R + VGL + SGG+ QR+ +AR + + + DE T+ L + Sbjct: 418 ERVCHLMEQVGLDPRARERYPHAFSGGQRQRIGIARAI---TLNPRVIVADEATSALDVS 474 Query: 867 DIQQLLDVLHKLRDQ-GNTIVVIEHNLDVIK-TADWIVDLGPEGGSGGGEILVSGTPETV 924 Q+LD+L +L+D+ G + I H++ VI+ D + G G+++ G E V Sbjct: 475 VRSQVLDLLMRLQDELGLAYIFISHDIGVIRYMCDRV------GVMYKGQLVEIGEAEQV 528 Query: 925 AECEASHTARFL 936 + L Sbjct: 529 CRTPEHAYTQAL 540 Score = 93.1 bits (230), Expect = 5e-17, Method: Composition-based stats. Identities = 39/158 (24%), Positives = 63/158 (39%), Gaps = 15/158 (9%) Query: 785 IHEVLDMTIEEAR--EFFDAVPALARKLQTLMDVGLT--YIRLGQSATTLSGGEAQRVKL 840 IH V + +E R A A + L V + L + A SGG QR + Sbjct: 121 IHTVGNQIVEALRLHTRMSKAEARAEAISLLKQVEIPAPEKALDRYAFQYSGGMRQRAMI 180 Query: 841 ARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKL-RDQGNTIVVIEHNLDVI-KTA 898 A L+ L I DEPTT L ++LD++ +L + G ++ I H++ V+ + A Sbjct: 181 AMALA---CKPQLLIADEPTTALDVTTQAEILDLIARLQKANGMAVLFITHDMGVVAQIA 237 Query: 899 DWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFL 936 D ++ + G + E + R L Sbjct: 238 DDVLVMHNGVAKEYGPV------EQIFHAPQDDYTRML 269 Score = 90.8 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 43/166 (25%), Positives = 67/166 (40%), Gaps = 11/166 (6%) Query: 463 IGDRL-KFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQ 521 + +R+ + VGL+ R SGG+ QRI +A I L + V DE + L Sbjct: 416 LEERVCHLMEQVGLDPRARERYPHAFSGGQRQRIGIARAIT--LNPRVIVADEATSALDV 473 Query: 522 RDNERLLGTLIHLRD-LGNTVIVVEHDEDAIR-AADHVIDIGPGAGVHGGEVVAEGPLEA 579 ++L L+ L+D LG I + HD IR D V ++ G++V G E Sbjct: 474 SVRSQVLDLLMRLQDELGLAYIFISHDIGVIRYMCDRV------GVMYKGQLVEIGEAEQ 527 Query: 580 IMAVPESLTGQYMSGKRKIEVPKKRVPANPEKVLKLTGARGNNLKD 625 + PE Q + P+ R + + + NLK Sbjct: 528 VCRTPEHAYTQALISAIPRPDPRDRDHSRRFRYVAPVNLEPGNLKP 573 >UniRef50_A8RPD7 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RPD7_9CLOT Length = 500 Score = 125 bits (315), Expect = 6e-27, Method: Composition-based stats. Identities = 57/236 (24%), Positives = 105/236 (44%), Gaps = 21/236 (8%) Query: 430 AISDMS-IGHAMEFFNNLKLAGQRA---KIAEKILKEIGDR-LKFLVNVGLNYLTLSRSA 484 +S M + F N +L QR ++ +K +KEI R L+ +NV L+ L R Sbjct: 91 ELSVMPDLNAVQNIFLNRELTPQRTLVSRLKQKQMKEIAGRVLRDSLNVDLD---LDRPL 147 Query: 485 ETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVV 544 L + Q + +A + A + ++DEP+ L D E+L + L++ G+++I + Sbjct: 148 RYLPLAQKQMVEIARTVYA--DAQIIIMDEPTAALEANDREQLFKVIRRLKEGGHSIIFI 205 Query: 545 EHDED-AIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEVPKK 603 H D + D V + G V G V + ++ I++ + + K + PK Sbjct: 206 SHHLDELMEICDRVSVLRDGQKVSEG-YVKDYTVDRIIS-------AMVGKELKNQYPKT 257 Query: 604 RVPANPEKVLKLTGARGNN-LKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIA 658 +VP E +L++ G + +D++ L G + G+ G GK+ +I Sbjct: 258 KVPI-GETLLEVKGLTKKSTFEDISFELHKGEILGLAGLEGCGKNEVIRAVFGAAV 312 Score = 86.1 bits (212), Expect = 6e-15, Method: Composition-based stats. Identities = 30/109 (27%), Positives = 53/109 (48%), Gaps = 7/109 (6%) Query: 808 RKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFAD 867 R L+ ++V L L + L + Q V++AR + + I+DEPT L D Sbjct: 131 RVLRDSLNVDLD---LDRPLRYLPLAQKQMVEIARTV---YADAQIIIMDEPTAALEAND 184 Query: 868 IQQLLDVLHKLRDQGNTIVVIEHNLDVI-KTADWIVDLGPEGGSGGGEI 915 +QL V+ +L++ G++I+ I H+LD + + D + L G + Sbjct: 185 REQLFKVIRRLKEGGHSIIFISHHLDELMEICDRVSVLRDGQKVSEGYV 233 Score = 66.5 bits (161), Expect = 5e-09, Method: Composition-based stats. Identities = 27/125 (21%), Positives = 56/125 (44%), Gaps = 11/125 (8%) Query: 790 DMTIEEAREFFDAVPALARKLQ------TLMDVGLTYIRLGQSATTLSGGEAQRVKLARE 843 +MTI + + LAR+L+ + + + + Q + LSGG Q+V LAR Sbjct: 359 NMTI-ASLKQISRGRTLARRLEDRVSADYMERMRVKAKGIRQGISALSGGNQQKVMLARW 417 Query: 844 LSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDV-IKTADWIV 902 + G +++L+EPT G+ ++ + + + G +V++ + + D I+ Sbjct: 418 MMM---GGDVFLLEEPTRGIDVNAKTEVYEAIGECVKSGKGVVIVSSEEEEVLGICDKIL 474 Query: 903 DLGPE 907 + Sbjct: 475 VMKQG 479 Score = 62.6 bits (151), Expect = 7e-08, Method: Composition-based stats. Identities = 23/136 (16%), Positives = 52/136 (38%), Gaps = 12/136 (8%) Query: 433 DMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEA 492 +M+I + LA + ++ + + + + LSGG Sbjct: 359 NMTIASLKQISRGRTLARRLEDRVSA---------DYMERMRVKAKGIRQGISALSGGNQ 409 Query: 493 QRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEH-DEDAI 551 Q++ LA + G G +++L+EP+ G+ + + G V++V +E+ + Sbjct: 410 QKVMLARWMMMG--GDVFLLEEPTRGIDVNAKTEVYEAIGECVKSGKGVVIVSSEEEEVL 467 Query: 552 RAADHVIDIGPGAGVH 567 D ++ + G Sbjct: 468 GICDKILVMKQGRVTR 483 Score = 43.8 bits (102), Expect = 0.036, Method: Composition-based stats. Identities = 20/76 (26%), Positives = 31/76 (40%), Gaps = 7/76 (9%) Query: 607 ANPEKVLKLTGARG-----NNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQ 661 + + VLK+ G L+ V LTL G + G +G+GKSTLI + R Sbjct: 3 SEEDVVLKMEGIYKAFGSVRVLEGVDLTLHRGEVLGLIGENGAGKSTLIK--ILCGIHRM 60 Query: 662 LNGATIAEPAPYRDIQ 677 G+ + + Sbjct: 61 DKGSIVLSGKKVDILN 76 >UniRef50_B0PG52 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=B0PG52_9FIRM Length = 516 Score = 125 bits (315), Expect = 7e-27, Method: Composition-based stats. Identities = 92/450 (20%), Positives = 160/450 (35%), Gaps = 104/450 (23%) Query: 452 RAKIAEKILKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYV 511 AK A ++ +EI + + E +S G QR+ + + G + + Sbjct: 114 DAKKAIQMTEEIAQKYNL-------PVPAQEKVENISVGLKQRVEIIKALLKG--AEILI 164 Query: 512 LDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDE-DAIRAADHVIDIGPGAGVHGGE 570 LDEP+ L ++ E L L HLRD G+T++ + H + + D V + G Sbjct: 165 LDEPTTVLTPQETEELFVELKHLRDQGHTILFISHKLYEVKKLCDRVTVM------RAGR 218 Query: 571 VVAEGPLEAIMAVPESLTGQYMSGKRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTL 630 ++A I V E+ + M G+ +EV +K VLK+ GA N Sbjct: 219 MIA---TRNIADVTEADISRMMVGRDVVEVIEKEKAKPGAVVLKVRGATCQN-------- 267 Query: 631 PVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAEPAPYRDIQGLEHFDKV----I 686 +G+ L N TL L A + + ++ + +K+ I Sbjct: 268 ------------DTGRKLLDNVTLNVKKGEILGLAGVEGNGQHDILEAIAGVEKLTAGTI 315 Query: 687 DIDQSPIGRTPRSNPATYTGVFTPVREL-FAGVPESRARGYTPGRFSFNVRGGRCEACQG 745 +++ I +R+ + +PE R T + S Sbjct: 316 ELNGKDITNHSIR----------EIRDAGISHIPEDRMAEGTAKKLS------------- 352 Query: 746 DGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAVPA 805 + + L + R+ + L +K K I E EA Sbjct: 353 -----IANNILAG------SHRSSRFTGKVL---FKMKAIRE-------EADTLIKQYQV 391 Query: 806 LARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHF 865 + Q LSGG Q+V +ARE S + ++D+PT G+ Sbjct: 392 KCSGRE-------------QEIGMLSGGNIQKVVVAREFSVE---PEVILVDQPTRGIDI 435 Query: 866 ADIQQLLDVLHKLRDQGNTIVVIEHNLDVI 895 + + L +LRD+G I+V +L+ + Sbjct: 436 GAATFIRNRLVQLRDEGKAILVNSADLNEV 465 Score = 94.6 bits (234), Expect = 1e-17, Method: Composition-based stats. Identities = 44/154 (28%), Positives = 69/154 (44%), Gaps = 12/154 (7%) Query: 780 YKGKTIHEVLDMTIEEAREF-FDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRV 838 T+ E + + +E R FDA A+ + L + + +S G QRV Sbjct: 92 VPSLTVAENVVLGVEPKRGIRFDAKKAIQMTEEIAQKYNLP-VPAQEKVENISVGLKQRV 150 Query: 839 KLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNL-DVIKT 897 ++ + L K G + ILDEPTT L + ++L L LRDQG+TI+ I H L +V K Sbjct: 151 EIIKALLK---GAEILILDEPTTVLTPQETEELFVELKHLRDQGHTILFISHKLYEVKKL 207 Query: 898 ADWIVDLGPEGGSGGGEILVSGTPETVAECEASH 931 D + + G ++ + V E + S Sbjct: 208 CDRVTVM------RAGRMIATRNIADVTEADISR 235 Score = 52.6 bits (125), Expect = 8e-05, Method: Composition-based stats. Identities = 27/115 (23%), Positives = 50/115 (43%), Gaps = 11/115 (9%) Query: 487 LSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEH 546 LSGG Q++ +A + + + ++D+P+ G+ + L+ LRD G ++V Sbjct: 403 LSGGNIQKVVVAREF--SVEPEVILVDQPTRGIDIGAATFIRNRLVQLRDEGKAILVNSA 460 Query: 547 DE-DAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEV 600 D + + +D + A H G + G E + E G YM G ++ Sbjct: 461 DLNEVLGLSDSL------AVFHNGRIT--GYFEDSSTLTEEELGLYMLGVKEQPA 507 >UniRef50_O34900 L-cystine import ATP-binding protein tcyN n=96 Tax=Bacteria RepID=TCYN_BACSU Length = 259 Score = 125 bits (314), Expect = 9e-27, Method: Composition-based stats. Identities = 49/199 (24%), Positives = 89/199 (44%), Gaps = 16/199 (8%) Query: 746 DGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKYK---GKTIHEVLDMTIEEAREFFDA 802 +G+I + + + + R + +Y KT+ E + + AR+ Sbjct: 55 EGIISIHDKVINCRFPSKKEVHWLRKQTAMVFQQYHLFAHKTVIENVMEGLTIARK-MRK 113 Query: 803 VPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTG 862 A A L VGL +L + LSGG+ QRV +AR L+ + + DEPT Sbjct: 114 QDAYAVAENELRKVGL-QDKLNAYPSQLSGGQKQRVGIARALAIH---PDVLLFDEPTAA 169 Query: 863 LHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVI-KTADWIVDLGPEGGSGGGEILVSGTP 921 L + ++L+V+ ++ G T++V+ H ++ + +D +V + G I+ GTP Sbjct: 170 LDPELVGEVLEVMLEIVKTGATMIVVTHEMEFARRVSDQVVFMDE------GVIVEQGTP 223 Query: 922 ETV-AECEASHTARFLKPM 939 E V + T +FL+ + Sbjct: 224 EEVFRHTKKDRTRQFLRRV 242 Score = 92.7 bits (229), Expect = 6e-17, Method: Composition-based stats. Identities = 32/128 (25%), Positives = 57/128 (44%), Gaps = 11/128 (8%) Query: 468 KFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERL 527 L VGL L+ LSGG+ QR+ +A + + + + DEP+ L + Sbjct: 122 NELRKVGLQ-DKLNAYPSQLSGGQKQRVGIARALA--IHPDVLLFDEPTAALDPELVGEV 178 Query: 528 LGTLIHLRDLGNTVIVVEHDEDAI-RAADHVIDIGPGAGVHGGEVVAEGPLEAIMA-VPE 585 L ++ + G T+IVV H+ + R +D V+ + G +V +G E + + Sbjct: 179 LEVMLEIVKTGATMIVVTHEMEFARRVSDQVVFMDEGV------IVEQGTPEEVFRHTKK 232 Query: 586 SLTGQYMS 593 T Q++ Sbjct: 233 DRTRQFLR 240 >UniRef50_Q12DQ3 ABC transporter related n=9 Tax=root RepID=Q12DQ3_POLSJ Length = 262 Score = 125 bits (314), Expect = 1e-26, Method: Composition-based stats. Identities = 41/188 (21%), Positives = 79/188 (42%), Gaps = 17/188 (9%) Query: 755 FLPD-IYVPCDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTL 813 F+ D P + G + L + + + + + +A A + L Sbjct: 81 FMSDRELAPQRREIGMVFQ---LFYLWPHLNVRDNVALGSIKAGG-MSKPEAYELADEML 136 Query: 814 MDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLD 873 V L+ + LSGG+ QRV +AR L+++ L + DEPT+ L + ++L Sbjct: 137 EKVHLSNK-ADEYPERLSGGQQQRVAIARALAQQ---PKLILFDEPTSALDPELVGEVLT 192 Query: 874 VLHKLRDQGNTIVVIEHNLDVIK-TADWIVDLGPEGGSGGGEILVSGTPETVAECEA-SH 931 V+ +L ++G +++++ H + + AD ++ + GG I+ G V Sbjct: 193 VIRELAEEGRSMILVTHEIRFARDVADRVIFMD------GGHIVEQGPAADVINNPQLER 246 Query: 932 TARFLKPM 939 T FL + Sbjct: 247 TRCFLGQV 254 Score = 101 bits (253), Expect = 1e-19, Method: Composition-based stats. Identities = 32/119 (26%), Positives = 54/119 (45%), Gaps = 10/119 (8%) Query: 468 KFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERL 527 + L V L+ E LSGG+ QR+ +A + + + DEP+ L + Sbjct: 134 EMLEKVHLSN-KADEYPERLSGGQQQRVAIARALAQQ--PKLILFDEPTSALDPELVGEV 190 Query: 528 LGTLIHLRDLGNTVIVVEHDEDAIR-AADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPE 585 L + L + G ++I+V H+ R AD VI + GG +V +GP ++ P+ Sbjct: 191 LTVIRELAEEGRSMILVTHEIRFARDVADRVIFM------DGGHIVEQGPAADVINNPQ 243 >UniRef50_Q01NP8 ABC transporter related n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q01NP8_SOLUE Length = 495 Score = 125 bits (314), Expect = 1e-26, Method: Composition-based stats. Identities = 62/257 (24%), Positives = 106/257 (41%), Gaps = 29/257 (11%) Query: 431 ISDMSIGHAMEF-FNNLKL-AGQRAKIAEKILKEIGDRLKFLVNVGLNYLTLSRSAETLS 488 D+++ + + L K ++ +E+ +R + + R+ TLS Sbjct: 90 FPDLTVAENIALALEGVALWRKVDWKARDRQARELLERTGADI-------SPERAVRTLS 142 Query: 489 GGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDE 548 E Q + +A IGA + +LDEP+ L +R+ ERL + LR G ++ + H Sbjct: 143 MPEQQIVEIAKAIGAR--SKILILDEPTASLTEREVERLFRVIQTLRGEGAGIVYISHRL 200 Query: 549 D-AIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEVPKKRVPA 607 D AD V + G + + V + + M G+ + KR Sbjct: 201 DEVAAIADRVTVLRDGRSI---------ATRELREVDRAELIRLMVGRDIDAIFPKREVP 251 Query: 608 NPEKVLKLTGARGNN--LKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPI-----AQR 660 E VL+ G R ++DVTL + G I G+ GSG+S L +TLF + + Sbjct: 252 IGEVVLETRGLRCRESGVRDVTLAVRRGEILGIAGLVGSGRSELA-ETLFGLTPADGGEI 310 Query: 661 QLNGATIAEPAPYRDIQ 677 +L G + +P I+ Sbjct: 311 RLRGEAVRIDSPADAIR 327 Score = 84.6 bits (208), Expect = 2e-14, Method: Composition-based stats. Identities = 41/158 (25%), Positives = 69/158 (43%), Gaps = 10/158 (6%) Query: 771 YNRETLEIKYKGKTIHEVLDMTIEEAREFFDAV--PALARKLQTLMDVGLTYIRLGQSAT 828 Y + L + T+ E + + + E + V A R+ + L++ I ++ Sbjct: 84 YQQPAL---FPDLTVAENIALAL-EGVALWRKVDWKARDRQARELLERTGADISPERAVR 139 Query: 829 TLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVI 888 TLS E Q V++A+ + R + ILDEPT L ++++L V+ LR +G IV I Sbjct: 140 TLSMPEQQIVEIAKAIGARS---KILILDEPTASLTEREVERLFRVIQTLRGEGAGIVYI 196 Query: 889 EHNLDVIKT-ADWIVDLGPEGGSGGGEILVSGTPETVA 925 H LD + AD + L E+ E + Sbjct: 197 SHRLDEVAAIADRVTVLRDGRSIATRELREVDRAELIR 234 Score = 66.5 bits (161), Expect = 4e-09, Method: Composition-based stats. Identities = 31/156 (19%), Positives = 66/156 (42%), Gaps = 11/156 (7%) Query: 431 ISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDR---LKFLVNVGLNYLTLSRSAETL 487 + +M + N LA A + ++ I +R ++ + + +L +L Sbjct: 343 VLEMPVA------ANTSLANLGAVSSHGMIDAIAERDLARGYVERLRIKTHSLYAETGSL 396 Query: 488 SGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHD 547 SGG Q++ LA + + + +LDEP+ G+ + +++L + G ++++ + Sbjct: 397 SGGNQQKVALARWLA--IEPAVLILDEPTQGVDIGSKSEIHEMMVNLAEQGLAIVMISSE 454 Query: 548 EDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAV 583 I I + G + G AE E I+A+ Sbjct: 455 LPEILGMSDRIAVMHGGTMTGILTRAEATQEKILAM 490 >UniRef50_B1L608 ABC transporter related n=3 Tax=Archaea RepID=B1L608_KORCO Length = 309 Score = 125 bits (313), Expect = 1e-26, Method: Composition-based stats. Identities = 44/159 (27%), Positives = 72/159 (45%), Gaps = 16/159 (10%) Query: 772 NRETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALA------RKLQTLMDVGLTYIRLGQ 825 ++ +I Y + D+T+EE + ++ L R + + L IR G+ Sbjct: 80 DKAIRKIGYMPQRFSLYEDLTVEENLMLYGSLQGLRGQHLRERVNELMDRFYLREIR-GR 138 Query: 826 SATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTI 885 A LSGG QR+ LA L L ILDEPT G+ ++ + +L +G TI Sbjct: 139 MAGRLSGGMKQRLSLAVALVH---DPDLLILDEPTAGVDPPLRRRFWEHFKELNKEGKTI 195 Query: 886 VVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETV 924 +V H +D + D + +G GG ++ GTP+ + Sbjct: 196 LVTTHYMDEAENCDRLALMG------GGRVIAEGTPQEI 228 Score = 93.8 bits (232), Expect = 3e-17, Method: Composition-based stats. Identities = 33/120 (27%), Positives = 51/120 (42%), Gaps = 8/120 (6%) Query: 461 KEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLH 520 + + +R+ L++ R A LSGG QR+ LA + + +LDEP+ G+ Sbjct: 117 QHLRERVNELMDRFYLREIRGRMAGRLSGGMKQRLSLAVALVH--DPDLLILDEPTAGVD 174 Query: 521 QRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAI 580 R L G T++V H D D + +G GG V+AEG + I Sbjct: 175 PPLRRRFWEHFKELNKEGKTILVTTHYMDEAENCDRLALMG------GGRVIAEGTPQEI 228 >UniRef50_A7BC11 Putative uncharacterized protein n=1 Tax=Actinomyces odontolyticus ATCC 17982 RepID=A7BC11_9ACTO Length = 485 Score = 125 bits (313), Expect = 1e-26, Method: Composition-based stats. Identities = 64/262 (24%), Positives = 110/262 (41%), Gaps = 43/262 (16%) Query: 421 VYVENTPLPAISDMSIGHA---------MEFF-----NNLKLAGQRAKIAEKILKEIGDR 466 V ++ L + +GH +FF L G+ + L E R Sbjct: 69 VRIDGRDLAEVPLTEVGHLCSSVFQNPRTQFFCDTVSEELAFCGENYGRDHEALIEESTR 128 Query: 467 LKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNER 526 L +G+++L + R +LSGG+ Q++ LA + +G + + DEP+ L Sbjct: 129 AAEL--MGISHL-MDRKLSSLSGGQLQKVALACALASG--APVLLADEPTSNLDPDAIAD 183 Query: 527 LLGTLIHLRDLGNTVIVVEHDEDAIR-AADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPE 585 + L L++ G T++VVEH +R AD V+ + GGEV E A+ + Sbjct: 184 VRRALAILKEQGMTIVVVEHRLHFLRGLADLVLLM------EGGEVTCAWSGEEFYAMDD 237 Query: 586 SLTGQYMSGKRKIE--VPKKRVP-ANPEKVLKLTGARGNNLKDVTL-------------T 629 + Q + + ++ P+ VP N +K G + +D++ Sbjct: 238 AQ-RQSLGLRTLVDPGPPEAWVPSRNSDKEASHEGGVRLSCRDLSFSYGNTPVFDGLNAD 296 Query: 630 LPVGLFTCITGVSGSGKSTLIN 651 P G TCI G++G GK+TL+ Sbjct: 297 FPAGQITCIAGMNGVGKTTLVR 318 Score = 116 bits (290), Expect = 5e-24, Method: Composition-based stats. Identities = 75/314 (23%), Positives = 114/314 (36%), Gaps = 94/314 (29%) Query: 614 KLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAEPAPY 673 +LTG R L V +++ G T + G SG GKSTL+ L + + G Sbjct: 14 ELTGDRVKALHGVDVSVRPGTLTLVCGSSGCGKSTLMR-ALTGLVPQMTPGE-------- 64 Query: 674 RDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESRARGYTPGRFSF 733 D V+ ID + P T V L + V + R F Sbjct: 65 --------LDGVVRIDGRDLAEVP----------LTEVGHLCSSV-------FQNPRTQF 99 Query: 734 NVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKYKGKTIHEVLDMTI 793 C+ + E+ F + Y G+ HE L Sbjct: 100 F-----CDT------VSEELAFCGENY---------------------GRD-HEALIEES 126 Query: 794 EEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTL 853 A E + RKL ++LSGG+ Q+V LA L+ +G + Sbjct: 127 TRAAELMGISHLMDRKL-----------------SSLSGGQLQKVALACALA---SGAPV 166 Query: 854 YILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIK-TADWIVDLGPEGGSGG 912 + DEPT+ L I + L L++QG TIVV+EH L ++ AD ++ + G Sbjct: 167 LLADEPTSNLDPDAIADVRRALAILKEQGMTIVVVEHRLHFLRGLADLVLLM------EG 220 Query: 913 GEILVSGTPETVAE 926 GE+ + + E Sbjct: 221 GEVTCAWSGEEFYA 234 Score = 93.8 bits (232), Expect = 3e-17, Method: Composition-based stats. Identities = 30/107 (28%), Positives = 54/107 (50%), Gaps = 5/107 (4%) Query: 809 KLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADI 868 + L D L ++ + +LSGG+ QR+ +A R TG+ + ILDEPT+G+ + Sbjct: 379 ADKLLGDFDLAHLG-DRHPLSLSGGQKQRLVIAAA---RATGRRIVILDEPTSGVDARHL 434 Query: 869 QQLLDVLHKLRDQGNTIVVIEHNLDVIKTA-DWIVDLGPEGGSGGGE 914 + L ++ D+G ++V+ H+ + D ++ L P G E Sbjct: 435 TSITSTLRRIADEGAAVIVVTHDGEFASACADRLITLTPTGAICARE 481 Score = 82.7 bits (203), Expect = 7e-14, Method: Composition-based stats. Identities = 40/132 (30%), Positives = 62/132 (46%), Gaps = 6/132 (4%) Query: 432 SDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTLSRSAETLSGGE 491 + + + LAG+ A + E D+L L + L +L R +LSGG+ Sbjct: 347 CALVMQDTGRQLFSDTLAGELTIGASEASGEDADKL--LGDFDLAHLG-DRHPLSLSGGQ 403 Query: 492 AQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAI 551 QR+ +A+ G + +LDEP+ G+ R + TL + D G VIVV HD + Sbjct: 404 KQRLVIAAARATGR--RIVILDEPTSGVDARHLTSITSTLRRIADEGAAVIVVTHDGEFA 461 Query: 552 RA-ADHVIDIGP 562 A AD +I + P Sbjct: 462 SACADRLITLTP 473 >UniRef50_Q97WT4 Putative ABC transporter ATP-binding protein SSO2030 n=12 Tax=Sulfolobaceae RepID=Y2030_SULSO Length = 530 Score = 125 bits (313), Expect = 1e-26, Method: Composition-based stats. Identities = 56/244 (22%), Positives = 104/244 (42%), Gaps = 21/244 (8%) Query: 460 LKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGL 519 E+ +R++ + + R TLSGGE QR LAS + + +LDEP+ + Sbjct: 117 RDEMIERVEESMKIYGISHLRDREINTLSGGELQRTILASVLA--MRPKALILDEPTSNI 174 Query: 520 HQRDNERLLGTLIHLRDLGNTVIVVEHD-EDAIRAADHVIDIGPGA---GVHGGEVV--A 573 + +L + R G ++++VEH E + D +I + G V E+V A Sbjct: 175 DPQGTREILELVKTFRSEGISLVLVEHKIERVLPFVDRIIVVEEGKIAVDVRKDEIVDKA 234 Query: 574 EGPLEAIMAVPESLTGQYMSGKRKIEV----------PKKRVPANPEKV---LKLTGARG 620 + + +P+ + +G RKI+ P R+ E + +K+ G Sbjct: 235 DFLYSLGLEIPDYMLFLKKNGFRKIDYEYLRKTYTYRPPSRIGGKGEALYASVKVKTKNG 294 Query: 621 NNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAEPAPYRDIQGLE 680 L + ++L G T + G +GSGK+TL+ + I +++L D+ + Sbjct: 295 IYLINTKISLKQGTITALMGKNGSGKTTLLKVIVGLIDKKRLIVEEEKVIVNGVDLSKTK 354 Query: 681 HFDK 684 ++ Sbjct: 355 LVER 358 Score = 94.6 bits (234), Expect = 2e-17, Method: Composition-based stats. Identities = 38/156 (24%), Positives = 73/156 (46%), Gaps = 16/156 (10%) Query: 771 YNRETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTL 830 Y + ++ + +T+ + + +++ R + L L R L Sbjct: 364 YLPQFFDVMFIKRTVEDEIKFSMKN-----RGTYDEKRLGEVLKMFSLDAYRKEDPLV-L 417 Query: 831 SGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEH 890 S G+ +RV +A L+ G + ++DEPT+G + Q L L +LRD+G TI+V+ H Sbjct: 418 SMGQRRRVAMASVLA---GGAKVILMDEPTSGQDWYHRQILGKELLELRDKGYTILVVTH 474 Query: 891 NLDVI-KTADWIVDLGPEGGSGGGEILVSGTPETVA 925 + + + AD+++ + G+I++ G PE V Sbjct: 475 DSRFVDRFADYLLVMNE------GKIVLEGKPEEVF 504 Score = 94.6 bits (234), Expect = 2e-17, Method: Composition-based stats. Identities = 37/164 (22%), Positives = 73/164 (44%), Gaps = 10/164 (6%) Query: 748 VIKVEMHFLPDIYVPCDQCKGKRYNRETLE---IKYKGKTIHEVLDMTIEEAREFFDAVP 804 IK E+ + +Y L+ + TI + + +E Sbjct: 62 EIKGEVRVFGFDVKSTPIHEISKYVGTLLQDPDTQAFNYTIIDEVAFGVEN--YMISRDE 119 Query: 805 ALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLH 864 + R +++ G++++R + TLSGGE QR LA L+ R ILDEPT+ + Sbjct: 120 MIERVEESMKIYGISHLR-DREINTLSGGELQRTILASVLAMR---PKALILDEPTSNID 175 Query: 865 FADIQQLLDVLHKLRDQGNTIVVIEHNLDV-IKTADWIVDLGPE 907 +++L+++ R +G ++V++EH ++ + D I+ + Sbjct: 176 PQGTREILELVKTFRSEGISLVLVEHKIERVLPFVDRIIVVEEG 219 Score = 85.0 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 43/182 (23%), Positives = 72/182 (39%), Gaps = 23/182 (12%) Query: 412 TRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIG------- 464 RL E V V +S + +F L I + EI Sbjct: 334 KRLIVEEEKVIVNGV---DLSKTKLVERGKFIAYLPQFFDVMFIKRTVEDEIKFSMKNRG 390 Query: 465 ----DRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLH 520 RL ++ + LS G+ +R+ +AS + G + ++DEP+ G Sbjct: 391 TYDEKRLGEVLKMFSLDAYRKEDPLVLSMGQRRRVAMASVLAGG--AKVILMDEPTSGQD 448 Query: 521 QRDNERLLGTLIHLRDLGNTVIVVEHDEDAI-RAADHVIDIGPGAGVHGGEVVAEGPLEA 579 + L L+ LRD G T++VV HD + R AD+++ + + G++V EG E Sbjct: 449 WYHRQILGKELLELRDKGYTILVVTHDSRFVDRFADYLLVM------NEGKIVLEGKPEE 502 Query: 580 IM 581 + Sbjct: 503 VF 504 >UniRef50_B7I9F6 Glutathione import ATP-binding protein GsiA n=13 Tax=Acinetobacter RepID=B7I9F6_ACIB5 Length = 529 Score = 125 bits (313), Expect = 1e-26, Method: Composition-based stats. Identities = 60/256 (23%), Positives = 102/256 (39%), Gaps = 32/256 (12%) Query: 466 RLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNE 525 +L V + L R LSGG+ QR+ +A+ + L + + DEP+ L Sbjct: 139 QLLKDVGIANPEYILKRYPHELSGGQKQRVMIAAALA--LQPKILIADEPTTALDVILQT 196 Query: 526 RLLGTLIHLRDL-GNTVIVVEHDEDAIRA-ADHVIDIGPGAGVHGGEVVAEGPLEAIMAV 583 ++L L L+ G +I++ HD + +R AD +I + H G+VV +G L+ I Sbjct: 197 QILELLKSLQSKYGMALILISHDLNLVRRYADELIVL------HKGQVVEQGKLQQIFEH 250 Query: 584 PESLTGQYMSGKRKIEVPKKRVPANPEKVLKLTGAR----------------GNNLKDVT 627 P S+ Q + + P+ K+L + N +++V Sbjct: 251 PTSVYTQQLLDH---NLGFAEQPSTSHKILSVQQLNVKYPIRRGFFNRIQGYTNAVENVN 307 Query: 628 LTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAEPAPYRDIQGLEHF-DKVI 686 L G I G SGSGKS+L L + + + + + + + L + Sbjct: 308 FELAQGEALGIVGESGSGKSSLAL-ALVRLIKSEGQINFLGQDINRLEQKALRKIRSDLQ 366 Query: 687 DIDQSPIGR-TPRSNP 701 + Q P G PR Sbjct: 367 IVFQDPFGSLNPRMTV 382 Score = 110 bits (274), Expect = 3e-22, Method: Composition-based stats. Identities = 41/145 (28%), Positives = 72/145 (49%), Gaps = 14/145 (9%) Query: 801 DAVPALARKLQTLMDVGL--TYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDE 858 A + +Q L DVG+ L + LSGG+ QRV +A L+ + + I DE Sbjct: 129 SKAKAQQQVIQLLKDVGIANPEYILKRYPHELSGGQKQRVMIAAALALQ---PKILIADE 185 Query: 859 PTTGLHFADIQQLLDVLHKLRDQ-GNTIVVIEHNLDVI-KTADWIVDLGPEGGSGGGEIL 916 PTT L Q+L++L L+ + G +++I H+L+++ + AD ++ L G+++ Sbjct: 186 PTTALDVILQTQILELLKSLQSKYGMALILISHDLNLVRRYADELIVLHK------GQVV 239 Query: 917 VSGTPETVAECEAS-HTARFLKPML 940 G + + E S +T + L L Sbjct: 240 EQGKLQQIFEHPTSVYTQQLLDHNL 264 Score = 99.6 bits (247), Expect = 5e-19, Method: Composition-based stats. Identities = 43/177 (24%), Positives = 73/177 (41%), Gaps = 15/177 (8%) Query: 767 KGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKL------QTLMDVGLTY 820 K R R L+I ++ MT+ + V A+A K L+ V L Sbjct: 356 KALRKIRSDLQIVFQDPFGSLNPRMTVGQIVAEGLKVKAIADKEIKQQVESALIKVELAE 415 Query: 821 IRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRD 880 + LSGG+ QRV LAR L + L ILDEPT+ L + ++ +L +L+ Sbjct: 416 GFQHRYPHELSGGQRQRVALARALVVQ---PKLLILDEPTSALDRTTQKAMIQLLRRLQQ 472 Query: 881 -QGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFL 936 + + + I H+L+V+K V + +++ E + + + L Sbjct: 473 TEHLSYIFISHDLNVVKALCHKVMVLRHA-----KVVEYQPTELLFNAPKTEYTKQL 524 Score = 92.3 bits (228), Expect = 9e-17, Method: Composition-based stats. Identities = 39/176 (22%), Positives = 74/176 (42%), Gaps = 11/176 (6%) Query: 413 RLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDRLK-FLV 471 RL ++A + + L + G ++ + K+ KEI +++ L+ Sbjct: 352 RLEQKALR-KIR-SDLQIVFQDPFGSLNPRMTVGQIVAEGLKVKAIADKEIKQQVESALI 409 Query: 472 NVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTL 531 V L R LSGG+ QR+ LA + + +LDEP+ L + + ++ L Sbjct: 410 KVELAEGFQHRYPHELSGGQRQRVALARALVVQ--PKLLILDEPTSALDRTTQKAMIQLL 467 Query: 532 IHLRD-LGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPES 586 L+ + I + HD + ++A H + + A +VV P E + P++ Sbjct: 468 RRLQQTEHLSYIFISHDLNVVKALCHKVMVLRHA-----KVVEYQPTELLFNAPKT 518 Score = 42.6 bits (99), Expect = 0.065, Method: Composition-based stats. Identities = 27/98 (27%), Positives = 48/98 (48%), Gaps = 12/98 (12%) Query: 5 EVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLS--AYAR 62 ++G T+ ++N+N + + + + + G SGSGKSSLA + R ++S + Sbjct: 295 RIQG-YTNAVENVNFELAQGEALGIVGESGSGKSSLALALV------RLIKSEGQINFLG 347 Query: 63 QFLSLMEKPDVDHIEGLSPAISIEQKSTSH-NPRSTVG 99 Q ++ +E+ + I S + Q NPR TVG Sbjct: 348 QDINRLEQKALRKIR--SDLQIVFQDPFGSLNPRMTVG 383 >UniRef50_Q5WD41 Multidrug ABC transporter ATP-binding protein n=2 Tax=Firmicutes RepID=Q5WD41_BACSK Length = 257 Score = 124 bits (312), Expect = 1e-26, Method: Composition-based stats. Identities = 45/154 (29%), Positives = 74/154 (48%), Gaps = 14/154 (9%) Query: 778 IKYKGKTIHEVLDMTIEEAREFFDAVPALARK-----LQTLMDVGLTYIRLGQSATTLSG 832 I Y + L++T+ E +F+ A+ L +K +QTL+ + R+ Q A LSG Sbjct: 80 IGYMSQKFSLYLELTVLENLQFYGAIYGLKKKELAARIQTLLRLTKLEDRISQRAGALSG 139 Query: 833 GEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNL 892 G QR+ L + L ILDEPT G+ + +++H+L+ T++V H + Sbjct: 140 GWKQRLALCCAMLHE---PELLILDEPTAGVDPVSRKIFWEIIHQLKKDDVTVLVTTHYM 196 Query: 893 DVIKTADWIVDLGPEGGSGGGEILVSGTPETVAE 926 D T D I G G +LV+G P+ + + Sbjct: 197 DEALTCDNI------GFMYAGNLLVNGGPKEIMD 224 Score = 79.2 bits (194), Expect = 7e-13, Method: Composition-based stats. Identities = 33/143 (23%), Positives = 59/143 (41%), Gaps = 11/143 (7%) Query: 440 MEFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLAS 499 + NL+ G I KE+ R++ L+ + +S+ A LSGG QR+ L Sbjct: 93 LTVLENLQFYG---AIYGLKKKELAARIQTLLRLTKLEDRISQRAGALSGGWKQRLALCC 149 Query: 500 QIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVID 559 + + +LDEP+ G+ + + L+ TV+V H D D++ Sbjct: 150 AMLHE--PELLILDEPTAGVDPVSRKIFWEIIHQLKKDDVTVLVTTHYMDEALTCDNIGF 207 Query: 560 IGPGAGVHGGEVVAEGPLEAIMA 582 + + G ++ G + IM Sbjct: 208 M------YAGNLLVNGGPKEIMD 224 >UniRef50_C8W9S4 ABC transporter related n=3 Tax=Bacteria RepID=C8W9S4_ATOPD Length = 286 Score = 124 bits (312), Expect = 1e-26, Method: Composition-based stats. Identities = 44/142 (30%), Positives = 69/142 (48%), Gaps = 13/142 (9%) Query: 801 DAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPT 860 A A L+ L VGL R LSGG+ QRV +AR ++ + + DEPT Sbjct: 154 SKEEAEAEALKQLEAVGLA-DRADFKPGALSGGQQQRVAIARAVAMH---PNVLLFDEPT 209 Query: 861 TGLHFADIQQLLDVLHKL-RDQGNTIVVIEHNLDVIK-TADWIVDLGPEGGSGGGEILVS 918 + L ++ +LDV+ L ++ G T++V+ H + K AD IV + GG ++ Sbjct: 210 SALDPELVRGVLDVMRDLAKNSGMTMIVVTHEMGFAKDVADRIVFM------EGGVVVEQ 263 Query: 919 GTPETVAECEA-SHTARFLKPM 939 GTP+ + S TA F+ + Sbjct: 264 GTPDAIFNNPQSSRTAEFIGAI 285 Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats. Identities = 41/177 (23%), Positives = 70/177 (39%), Gaps = 23/177 (12%) Query: 423 VENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIG-----------DRLKFLV 471 + T ++ + F L G ++ +I + LK L Sbjct: 109 ITGTNEAEVNALR-RDVGMVFQQFNLFGHLTVKENVMIGQIKVLGKSKEEAEAEALKQLE 167 Query: 472 NVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTL 531 VGL LSGG+ QR+ +A + + + + DEP+ L +L + Sbjct: 168 AVGLA-DRADFKPGALSGGQQQRVAIARAVA--MHPNVLLFDEPTSALDPELVRGVLDVM 224 Query: 532 IHL-RDLGNTVIVVEHDEDAIR-AADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPES 586 L ++ G T+IVV H+ + AD ++ + GG VV +G +AI P+S Sbjct: 225 RDLAKNSGMTMIVVTHEMGFAKDVADRIVFM------EGGVVVEQGTPDAIFNNPQS 275 >UniRef50_C0C2X8 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=C0C2X8_9CLOT Length = 513 Score = 124 bits (312), Expect = 1e-26, Method: Composition-based stats. Identities = 56/259 (21%), Positives = 102/259 (39%), Gaps = 19/259 (7%) Query: 431 ISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTLSRSAETLSGG 490 +++M++ N+ L + +E+ R + + + LS G Sbjct: 110 VNEMTVAE------NVFLGHAVRRGIIIDRQEMNKRAAEIFEQLNIDIDPEELVKNLSVG 163 Query: 491 EAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHD-ED 549 Q +A I + + ++DEPS L + ER+ + LRD G T+I + H E+ Sbjct: 164 YQQITEIAKAI--SMNAKLLIMDEPSAPLTNAEVERMFQLVETLRDQGVTIIYISHRLEE 221 Query: 550 AIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEVPKKRVPANP 609 R +D V + G V E E L + + K P+++ Sbjct: 222 IFRLSDRVTVLRDGQKVET-RWTKE-------TDTEQLIRLMVGRELKNTFPERKPMFTE 273 Query: 610 EKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAE 669 EK+L+L GN LKDV+ ++ G + G+ G+G++ L + + ++ G + Sbjct: 274 EKILELQDVTGNGLKDVSFSVRKGEILGLAGLVGAGRTELSHLIFGLVPLKE--GKMYLD 331 Query: 670 PAPYRDIQGLEHFDKVIDI 688 Y E K I + Sbjct: 332 GKEYSPGNAREAISKGIAL 350 Score = 82.7 bits (203), Expect = 6e-14, Method: Composition-based stats. Identities = 38/137 (27%), Positives = 64/137 (46%), Gaps = 11/137 (8%) Query: 784 TIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIR----LGQSATTLSGGEAQRVK 839 +I E + M A +V A++ + + + G T Q LSGG Q+V Sbjct: 365 SIRENISMANLRALSK-ASVLEKAKENKIVKEYGKTLNIKCASYEQQVRLLSGGNQQKVV 423 Query: 840 LARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDV-IKTA 898 LA+ L+ T L ILDEPT G+ ++ ++ +L + G TI++I ++ + A Sbjct: 424 LAKWLA---TEPELIILDEPTRGIDVGAKYEIYKIMCRLIEMGKTIIMISSEMEELLGMA 480 Query: 899 DWIVDLGPEGGSGGGEI 915 D I+ L + GE+ Sbjct: 481 DRIIVLAEK--RIAGEV 495 Score = 75.7 bits (185), Expect = 8e-12, Method: Composition-based stats. Identities = 32/130 (24%), Positives = 56/130 (43%), Gaps = 14/130 (10%) Query: 788 VLDMTIEEAREF---------FDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRV 838 V +MT+ E D R + + + + LS G Q Sbjct: 110 VNEMTVAENVFLGHAVRRGIIIDRQEMNKRAAEIFEQLNIDIDP-EELVKNLSVGYQQIT 168 Query: 839 KLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVI-KT 897 ++A+ +S L I+DEP+ L A+++++ ++ LRDQG TI+ I H L+ I + Sbjct: 169 EIAKAISMNA---KLLIMDEPSAPLTNAEVERMFQLVETLRDQGVTIIYISHRLEEIFRL 225 Query: 898 ADWIVDLGPE 907 +D + L Sbjct: 226 SDRVTVLRDG 235 Score = 74.6 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 36/144 (25%), Positives = 61/144 (42%), Gaps = 14/144 (9%) Query: 432 SDMSIGH--AMEFFNNLKLAGQRAKIAE-KILKEIGDRLKFLVNVGLNYLTLSRSAETLS 488 +SI +M L A K E KI+KE G L + + + LS Sbjct: 362 VHLSIRENISMANLRALSKASVLEKAKENKIVKEYGKTL------NIKCASYEQQVRLLS 415 Query: 489 GGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHD- 547 GG Q++ LA + + +LDEP+ G+ + + L ++G T+I++ + Sbjct: 416 GGNQQKVVLAKWLATE--PELIILDEPTRGIDVGAKYEIYKIMCRLIEMGKTIIMISSEM 473 Query: 548 EDAIRAADHVIDIGPGAGVHGGEV 571 E+ + AD +I + GEV Sbjct: 474 EELLGMADRIIVLAEKRIA--GEV 495 >UniRef50_D2LY61 ABC transporter related protein n=2 Tax=Firmicutes RepID=D2LY61_BACS4 Length = 512 Score = 124 bits (312), Expect = 1e-26, Method: Composition-based stats. Identities = 54/246 (21%), Positives = 99/246 (40%), Gaps = 26/246 (10%) Query: 422 YVENTPLP------AISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNVGL 475 ++ + ++ + + F L L + E+ + +L ++ Sbjct: 92 FIRGRKIAMLFQDAQLALNPVLKIKDNFKELLL--YHGLVPEQDIFTFSSKLLSKLHFSD 149 Query: 476 NYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHL- 534 L +SGG QR+ LA + L + + DEP+ L + +L + + Sbjct: 150 PVRVLESYPFQISGGMCQRVCLA--LALCLEPHLLIADEPTSALDDDCQKEVLDVIKQMN 207 Query: 535 RDLGNTVIVVEHDEDAI-RAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMS 593 ++LG TV+++ HD + AD V+ + H G + EGP +++ P+S + Sbjct: 208 QELGLTVLLITHDIEVAHALADRVVVL------HKGAIEEEGPARTVLSTPKSSYTNRLL 261 Query: 594 GKRKIEVPKKRVPANPEK-----VLKLTGA---RGNNLKDVTLTLPVGLFTCITGVSGSG 645 R ++ K P ++KL + +KDV L++ ITG SG G Sbjct: 262 SSRFVKSRHKSTKLEPSTEPILDIIKLEKSYSKSQPVIKDVNLSVYRKEIVGITGPSGCG 321 Query: 646 KSTLIN 651 KSTL Sbjct: 322 KSTLAK 327 Score = 91.5 bits (226), Expect = 1e-16, Method: Composition-based stats. Identities = 38/117 (32%), Positives = 56/117 (47%), Gaps = 12/117 (10%) Query: 823 LGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQ- 881 L +SGG QRV LA L L I DEPT+ L +++LDV+ ++ + Sbjct: 154 LESYPFQISGGMCQRVCLALAL---CLEPHLLIADEPTSALDDDCQKEVLDVIKQMNQEL 210 Query: 882 GNTIVVIEHNLDVI-KTADWIVDLGPEGGSGGGEILVSGTPETVAECE-ASHTARFL 936 G T+++I H+++V AD +V L G I G TV +S+T R L Sbjct: 211 GLTVLLITHDIEVAHALADRVVVLHK------GAIEEEGPARTVLSTPKSSYTNRLL 261 Score = 81.9 bits (201), Expect = 1e-13, Method: Composition-based stats. Identities = 27/98 (27%), Positives = 45/98 (45%), Gaps = 5/98 (5%) Query: 813 LMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLL 872 L VG+ + LS G+ QR+ LAR L + I DE + L Q+L Sbjct: 406 LEHVGIRDDTQLRRPPQLSTGQCQRIALARALV---LEPEILICDEAVSALDTHIQVQIL 462 Query: 873 DVLHKLRDQ-GNTIVVIEHNLDVIKT-ADWIVDLGPEG 908 ++LH L Q +I++I HN ++++ D + + Sbjct: 463 ELLHHLHYQLDISIIMISHNKKILESFCDRVAIMNNGA 500 Score = 69.2 bits (168), Expect = 7e-10, Method: Composition-based stats. Identities = 29/108 (26%), Positives = 49/108 (45%), Gaps = 5/108 (4%) Query: 462 EIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQ 521 I ++ +L +VG+ T R LS G+ QRI LA + L + + DE L Sbjct: 399 SIKAKI-YLEHVGIRDDTQLRRPPQLSTGQCQRIALARALV--LEPEILICDEAVSALDT 455 Query: 522 RDNERLLGTLIHLR-DLGNTVIVVEHDEDAIRA-ADHVIDIGPGAGVH 567 ++L L HL L ++I++ H++ + + D V + GA Sbjct: 456 HIQVQILELLHHLHYQLDISIIMISHNKKILESFCDRVAIMNNGAIKE 503 >UniRef50_D1AWW4 ABC transporter related protein n=9 Tax=Fusobacteriaceae RepID=D1AWW4_STRM9 Length = 230 Score = 124 bits (312), Expect = 2e-26, Method: Composition-based stats. Identities = 44/146 (30%), Positives = 68/146 (46%), Gaps = 10/146 (6%) Query: 784 TIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARE 843 T+ + L MT + FF K+ L+ Y + + +LSGGE QRV LA+ Sbjct: 88 TVEDFLAMTFQNRAAFFGMNKETRLKVDELLRKIDMYYKKDRMLGSLSGGELQRVLLAQA 147 Query: 844 LSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADWIVD 903 L + L ILDEP +G+ L ++ KL+ +G TI+ I HNL ++D Sbjct: 148 LHPQ---PNLLILDEPFSGIDTVCENYFLGIIQKLKKEGVTIIWIHHNLK------QVID 198 Query: 904 LGPEGGSGGGEILVSGTP-ETVAECE 928 + + G ++ SG P E + E Sbjct: 199 IADKVTCIKGTVMFSGVPREEIVEER 224 Score = 84.2 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 36/151 (23%), Positives = 54/151 (35%), Gaps = 24/151 (15%) Query: 430 AISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTLSRSAETLSG 489 M+ + FF K + E+ ++ Y R +LSG Sbjct: 91 DFLAMTFQNRAAFFG-------MNKETRLKVDELLRKIDM-------YYKKDRMLGSLSG 136 Query: 490 GEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDE- 548 GE QR+ LA + + +LDEP G+ LG + L+ G T+I + H+ Sbjct: 137 GELQRVLLAQAL--HPQPNLLILDEPFSGIDTVCENYFLGIIQKLKKEGVTIIWIHHNLK 194 Query: 549 DAIRAADHVIDIGPGAGVHGGEVVAEGPLEA 579 I AD V I G V+ G Sbjct: 195 QVIDIADKVTCIK-------GTVMFSGVPRE 218 >UniRef50_B9E9M0 Putative uncharacterized protein n=1 Tax=Macrococcus caseolyticus JCSC5402 RepID=B9E9M0_MACCJ Length = 284 Score = 124 bits (312), Expect = 2e-26, Method: Composition-based stats. Identities = 35/128 (27%), Positives = 64/128 (50%), Gaps = 10/128 (7%) Query: 805 ALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLH 864 A AR + + G+ L +S LSGG+ +R+ + L+ + ILDEPT GL Sbjct: 121 AKARAYELVKQFGMDESILNKSPFELSGGQMRRIAIMGVLAM---NPDVLILDEPTAGLD 177 Query: 865 FADIQQLLDVLHKL-RDQGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPET 923 Q+++D+ H+L R+ T++++ H ++ D++ + G ++ GTPE Sbjct: 178 PKGQQEIMDMFHRLQRELNITVILVTHQMEQAARCDYLYVMHQ------GTVVDKGTPEA 231 Query: 924 VAECEASH 931 + + SH Sbjct: 232 IFSKDLSH 239 Score = 93.5 bits (231), Expect = 3e-17, Method: Composition-based stats. Identities = 33/121 (27%), Positives = 59/121 (48%), Gaps = 9/121 (7%) Query: 467 LKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNER 526 + + G++ L++S LSGG+ +RI + + + + +LDEP+ GL + + Sbjct: 126 YELVKQFGMDESILNKSPFELSGGQMRRIAIMGVLA--MNPDVLILDEPTAGLDPKGQQE 183 Query: 527 LLGTLIHL-RDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPE 585 ++ L R+L TVI+V H + D++ + H G VV +G EAI + Sbjct: 184 IMDMFHRLQRELNITVILVTHQMEQAARCDYLYVM------HQGTVVDKGTPEAIFSKDL 237 Query: 586 S 586 S Sbjct: 238 S 238 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P0A196 UvrABC system protein A n=175 Tax=Bacteria RepID... 1241 0.0 UniRef50_P44410 UvrABC system protein A n=133 Tax=cellular organ... 1227 0.0 UniRef50_Q8ZJ07 UvrABC system protein A n=84 Tax=Bacteria RepID=... 1217 0.0 UniRef50_Q88QK7 UvrABC system protein A n=91 Tax=cellular organi... 1212 0.0 UniRef50_C9KNX7 Excinuclease ABC subunit A n=2 Tax=Bacteria RepI... 1184 0.0 UniRef50_Q5HHQ9 UvrABC system protein A n=172 Tax=cellular organ... 1182 0.0 UniRef50_Q87BK9 UvrABC system protein A n=247 Tax=cellular organ... 1182 0.0 UniRef50_Q8ENJ6 UvrABC system protein A n=258 Tax=cellular organ... 1180 0.0 UniRef50_D2RIL7 Excinuclease ABC, A subunit n=3 Tax=Bacteria Rep... 1174 0.0 UniRef50_A5WGZ4 Excinuclease ABC subunit A n=24 Tax=Bacteria Rep... 1167 0.0 UniRef50_O31151 UvrABC system protein A n=81 Tax=Bacteria RepID=... 1164 0.0 UniRef50_Q56242 UvrABC system protein A n=60 Tax=cellular organi... 1163 0.0 UniRef50_Q71WU0 UvrABC system protein A n=44 Tax=Bacteria RepID=... 1161 0.0 UniRef50_C7N595 Excinuclease ABC subunit A n=57 Tax=Bacteria Rep... 1153 0.0 UniRef50_O26543 UvrABC system protein A n=86 Tax=cellular organi... 1146 0.0 UniRef50_Q2YPX5 UvrABC system protein A n=164 Tax=root RepID=UVR... 1141 0.0 UniRef50_A8ID62 Excinuclease ABC A subunit n=66 Tax=Bacteria Rep... 1139 0.0 UniRef50_P63385 UvrABC system protein A n=172 Tax=cellular organ... 1137 0.0 UniRef50_Q8UF86 UvrABC system protein A n=78 Tax=cellular organi... 1137 0.0 UniRef50_O66911 UvrABC system protein A n=11 Tax=cellular organi... 1136 0.0 UniRef50_P63381 UvrABC system protein A n=53 Tax=Bacteria RepID=... 1132 0.0 UniRef50_Q9WYV0 UvrABC system protein A n=8 Tax=Bacteria RepID=U... 1123 0.0 UniRef50_A2C5J2 Excinuclease ABC, A subunit, ATP/GTP-binding sit... 1119 0.0 UniRef50_Q46577 UvrABC system protein A n=5 Tax=Bacteria RepID=U... 1117 0.0 UniRef50_A7NS89 Excinuclease ABC, A subunit n=3 Tax=Bacteria Rep... 1108 0.0 UniRef50_D0MK77 Excinuclease ABC, A subunit n=2 Tax=Bacteroidete... 1098 0.0 UniRef50_Q21RX9 Excinuclease ABC subunit A n=19 Tax=Bacteria Rep... 1083 0.0 UniRef50_A6DP81 Excinuclease ABC, A subunit n=3 Tax=Bacteria Rep... 1076 0.0 UniRef50_Q1MP46 Excinuclease ABC, A subunit n=2 Tax=Bacteria Rep... 1075 0.0 UniRef50_D1PT12 Excision endonuclease subunit UvrA n=3 Tax=Bacte... 1059 0.0 UniRef50_Q30YG3 Excinuclease ABC subunit A n=3 Tax=Bacteria RepI... 1058 0.0 UniRef50_Q2SR90 Excinuclease ABC, A subunit n=5 Tax=Bacteria Rep... 1055 0.0 UniRef50_D2QY36 Excinuclease ABC, A subunit n=1 Tax=Pirellula st... 1049 0.0 UniRef50_P47660 UvrABC system protein A n=6 Tax=Bacteria RepID=U... 1048 0.0 UniRef50_C1ZII9 UvrA family protein n=39 Tax=Bacteria RepID=C1ZI... 1039 0.0 UniRef50_C0QY85 Exinuclease ABC subunit A n=6 Tax=Bacteria RepID... 1038 0.0 UniRef50_B6WY93 Putative uncharacterized protein n=1 Tax=Desulfo... 1034 0.0 UniRef50_Q2RZZ5 Excinuclease ABC, A subunit n=1 Tax=Salinibacter... 1033 0.0 UniRef50_Q1PVF8 Strongly similar to exinuclease ABC, protein A n... 1033 0.0 UniRef50_B6YRR0 Excinuclease ABC subunit A n=1 Tax=Candidatus Az... 1032 0.0 UniRef50_Q30RE0 Excinuclease ABC subunit A n=21 Tax=Campylobacte... 1031 0.0 UniRef50_Q83NI8 Excinuclease ABC subunit A n=2 Tax=Tropheryma wh... 1025 0.0 UniRef50_C2NRS3 Excinuclease ABC, A subunit n=2 Tax=Bacillus cer... 1021 0.0 UniRef50_B8DJB0 Excinuclease ABC, A subunit n=2 Tax=Desulfovibri... 1017 0.0 UniRef50_Q6SI25 Excinuclease ABC, A subunit n=1 Tax=uncultured m... 1016 0.0 UniRef50_C1F8N8 Excinuclease ABC, A subunit n=1 Tax=Acidobacteri... 1010 0.0 UniRef50_Q2NJE0 Excinuclease ABC subunit A n=3 Tax=Candidatus Ph... 1009 0.0 UniRef50_Q01SK3 Excinuclease ABC subunit A n=20 Tax=Bacteria Rep... 1007 0.0 UniRef50_B3QT58 Excinuclease ABC, A subunit n=23 Tax=Bacteroidet... 996 0.0 UniRef50_Q2S5D7 Excinuclease ABC, A subunit n=3 Tax=Bacteria Rep... 995 0.0 UniRef50_C9PZ01 Excision endonuclease subunit UvrA n=8 Tax=Bacte... 992 0.0 UniRef50_B8I0Z8 Excinuclease ABC, A subunit n=1 Tax=Clostridium ... 991 0.0 UniRef50_B3DYB1 Excinuclease ABC subunit A, ATPase n=4 Tax=Bacte... 991 0.0 UniRef50_Q027K1 Excinuclease ABC subunit A n=2 Tax=Bacteria RepI... 984 0.0 UniRef50_Q3B5F8 Excinuclease ABC subunit A n=11 Tax=Chlorobiacea... 982 0.0 UniRef50_B2RMJ8 Excinuclease ABC A subunit n=30 Tax=Bacteria Rep... 980 0.0 UniRef50_A3ZSW8 Excinuclease ABC subunit A n=1 Tax=Blastopirellu... 978 0.0 UniRef50_D0LQB5 Excinuclease ABC, A subunit n=1 Tax=Haliangium o... 976 0.0 UniRef50_C1A9P0 UvrABC system protein A n=1 Tax=Gemmatimonas aur... 975 0.0 UniRef50_B5JM86 Excinuclease ABC, A subunit n=1 Tax=Verrucomicro... 974 0.0 UniRef50_C2M987 Excinuclease ABC subunit A n=1 Tax=Porphyromonas... 967 0.0 UniRef50_Q6MRC9 Excinuclease ABC subunit A n=1 Tax=Bdellovibrio ... 962 0.0 UniRef50_B1XYK7 Excinuclease ABC, A subunit n=2 Tax=Burkholderia... 947 0.0 UniRef50_A4BKX6 Excinuclease ABC, A subunit n=4 Tax=Proteobacter... 947 0.0 UniRef50_Q21RT9 UvrA family protein n=4 Tax=Bacteria RepID=Q21RT... 942 0.0 UniRef50_C0ABC8 Excinuclease ABC, A subunit n=1 Tax=Opitutaceae ... 936 0.0 UniRef50_C7I293 Excinuclease ABC, A subunit n=1 Tax=Thiomonas in... 935 0.0 UniRef50_A0LG77 UvrA family protein n=1 Tax=Syntrophobacter fuma... 933 0.0 UniRef50_D2R1K2 Excinuclease ABC, A subunit n=1 Tax=Pirellula st... 932 0.0 UniRef50_B9XQK9 Excinuclease ABC, A subunit n=3 Tax=Bacteria Rep... 930 0.0 UniRef50_C6VXN3 Excinuclease ABC, A subunit n=3 Tax=Bacteroidete... 927 0.0 UniRef50_B2UPV5 Excinuclease ABC, A subunit n=5 Tax=Bacteria Rep... 927 0.0 UniRef50_Q124L1 UvrA family protein n=23 Tax=cellular organisms ... 925 0.0 UniRef50_B8GRH5 Excinuclease ABC, A subunit n=10 Tax=Bacteria Re... 922 0.0 UniRef50_B5YG61 Excinuclease ABC, A subunit n=1 Tax=Thermodesulf... 920 0.0 UniRef50_D2QFW0 Excinuclease ABC, A subunit n=2 Tax=Bacteroidete... 918 0.0 UniRef50_B3DZR5 Excinuclease ABC subunit A, ATPase n=1 Tax=Methy... 909 0.0 UniRef50_B1ZMZ6 Excinuclease ABC, A subunit n=1 Tax=Opitutus ter... 908 0.0 UniRef50_A1WZ98 UvrA family protein n=2 Tax=Proteobacteria RepID... 900 0.0 UniRef50_B1ZV20 Excinuclease ABC, A subunit n=5 Tax=Bacteria Rep... 900 0.0 UniRef50_Q7URK7 Excinuclease ABC subunit A n=1 Tax=Rhodopirellul... 900 0.0 UniRef50_C0ADS9 Excinuclease ABC, A subunit n=1 Tax=Opitutaceae ... 895 0.0 UniRef50_Q2T972 Excinuclease ABC, subunit A, form 2 n=56 Tax=Bac... 892 0.0 UniRef50_B5JNR8 Excinuclease ABC, A subunit, putative n=1 Tax=Ve... 889 0.0 UniRef50_A9G6R8 Excinuclease ABC subunit A n=1 Tax=Sorangium cel... 888 0.0 UniRef50_Q1D9R5 UvrABC system, A protein n=2 Tax=Cystobacterinea... 871 0.0 UniRef50_Q6MBT0 Putative excinuclease ABC chain A n=1 Tax=Candid... 861 0.0 UniRef50_C4ZKV2 Excinuclease ABC, A subunit n=1 Tax=Thauera sp. ... 851 0.0 UniRef50_D0LX97 Excinuclease ABC, A subunit n=1 Tax=Haliangium o... 849 0.0 UniRef50_Q0A6L0 Excinuclease ABC, A subunit n=4 Tax=Bacteria Rep... 841 0.0 UniRef50_Q9PK60 UvrABC system protein A n=10 Tax=Chlamydia RepID... 835 0.0 UniRef50_Q9Z985 UvrABC system protein A n=5 Tax=Chlamydophila Re... 811 0.0 UniRef50_C4RNF2 Excinuclease ABC, A subunit n=1 Tax=Micromonospo... 779 0.0 UniRef50_B6W740 Putative uncharacterized protein n=1 Tax=Anaeroc... 724 0.0 UniRef50_Q0W0L7 Excinuclease ABC, ATPase subunit n=3 Tax=cellula... 723 0.0 UniRef50_B2T6A1 Excinuclease ABC, A subunit n=34 Tax=Bacteria Re... 699 0.0 UniRef50_A1SWH0 Excinuclease ABC, A subunit n=15 Tax=Bacteria Re... 699 0.0 UniRef50_B4V5Y5 Excinuclease ABC subunit A n=1 Tax=Streptomyces ... 699 0.0 UniRef50_B6A038 Excinuclease ABC, A subunit n=8 Tax=Bacteria Rep... 694 0.0 UniRef50_Q9RCZ2 Putative excinuclease ABC subunit A n=3 Tax=Stre... 690 0.0 UniRef50_D2AS77 Excinuclease ABC subunit A n=1 Tax=Streptosporan... 688 0.0 UniRef50_D1BHG7 Excinuclease ABC, A subunit n=1 Tax=Sanguibacter... 685 0.0 UniRef50_Q18CU1 Putative DNA repair protein n=6 Tax=Clostridium ... 682 0.0 UniRef50_C6R915 UvrABC system protein A n=2 Tax=Corynebacterium ... 674 0.0 UniRef50_B1L257 Excinuclease ABC, A subunit n=1 Tax=Clostridium ... 673 0.0 UniRef50_B8FST5 ABC transporter related n=5 Tax=Firmicutes RepID... 668 0.0 UniRef50_A8MGE0 Excinuclease ABC, A subunit n=1 Tax=Alkaliphilus... 667 0.0 UniRef50_B1VG20 Excinuclease ABC, subunit A n=2 Tax=Actinomyceta... 663 0.0 UniRef50_C3PKK6 Excinuclease ABC, subunit A n=10 Tax=Actinomycet... 655 0.0 UniRef50_A1TP16 Excinuclease ABC, A subunit n=4 Tax=Bacteria Rep... 655 0.0 UniRef50_C8VVR7 ABC transporter related n=1 Tax=Desulfotomaculum... 651 0.0 UniRef50_Q5WJS0 Excinuclease ABC subunit A n=38 Tax=cellular org... 645 0.0 UniRef50_B1KRA3 ABC transporter related n=1 Tax=Shewanella woody... 642 0.0 UniRef50_Q041B5 Excinuclease ATPase subunit n=53 Tax=Lactobacill... 638 0.0 UniRef50_C3RJK4 Excinuclease ABC subunit A n=2 Tax=Bacteria RepI... 637 0.0 UniRef50_Q6MKF2 Excinuclease ABC subunit A n=1 Tax=Bdellovibrio ... 627 e-178 UniRef50_D2ATA6 Excinuclease ABC, A subunit n=4 Tax=Actinomyceta... 625 e-177 UniRef50_D1JG21 Putative uncharacterized protein n=1 Tax=uncultu... 615 e-174 UniRef50_B5YKV1 Excinuclease ABC, A subunit n=1 Tax=Thermodesulf... 613 e-173 UniRef50_C4DT53 Excinuclease ATPase subunit n=3 Tax=Bacteria Rep... 612 e-173 UniRef50_C8PNC0 UvrABC system protein A n=4 Tax=cellular organis... 611 e-173 UniRef50_Q039P8 Excinuclease ATPase subunit n=56 Tax=Bacteria Re... 606 e-171 UniRef50_A6TUU6 ABC transporter related n=1 Tax=Alkaliphilus met... 605 e-171 UniRef50_C1B8F2 UvrA-like protein n=57 Tax=Bacteria RepID=C1B8F2... 603 e-171 UniRef50_C9XKB3 Putative antibiotic resistance ABC transporter, ... 601 e-170 UniRef50_A5LJ87 Excinuclease ABC subunit A n=13 Tax=Bacilli RepI... 601 e-170 UniRef50_C7PP78 ABC transporter related n=6 Tax=Bacteria RepID=C... 600 e-170 UniRef50_C2HBQ4 Excinuclease subunit A n=4 Tax=Enterococcus faec... 596 e-168 UniRef50_C2ENC0 Excinuclease subunit A n=1 Tax=Lactobacillus ult... 591 e-167 UniRef50_A0LIN7 Excinuclease ABC subunit A n=1 Tax=Syntrophobact... 589 e-166 UniRef50_A6VRX7 ABC transporter related n=4 Tax=Bacteria RepID=A... 586 e-165 UniRef50_C5C6C3 ABC transporter related n=3 Tax=Actinomycetales ... 581 e-164 UniRef50_C0VYB5 Excinuclease subunit A n=1 Tax=Actinomyces coleo... 575 e-162 UniRef50_B7GTR5 ABC transporter related n=26 Tax=Bacteria RepID=... 573 e-161 UniRef50_D2Q2S9 ABC transporter related protein n=6 Tax=Bacteria... 570 e-161 UniRef50_A1SIJ3 ABC transporter related n=10 Tax=Bacteria RepID=... 568 e-160 UniRef50_A6VPU1 ABC transporter related n=1 Tax=Actinobacillus s... 567 e-160 UniRef50_Q49WT2 Excinuclease ATPase subunit n=16 Tax=Staphylococ... 566 e-159 UniRef50_C7NL29 Excinuclease ATPase subunit n=1 Tax=Kytococcus s... 564 e-159 UniRef50_D1AQT8 ABC transporter related protein n=1 Tax=Sebaldel... 562 e-158 UniRef50_A6CCN1 Excinuclease ABC subunit A n=1 Tax=Planctomyces ... 561 e-158 UniRef50_UPI0001BC2CF0 putative excinuclease ABC subunit A n=1 T... 553 e-156 UniRef50_A6BZF4 Excinuclease ABC subunit A n=1 Tax=Planctomyces ... 553 e-155 UniRef50_B1KWH8 Excinuclease ABC, A subunit n=7 Tax=Clostridium ... 549 e-154 UniRef50_B8I5E2 ABC transporter related n=4 Tax=Clostridium RepI... 543 e-153 UniRef50_B4CXL9 ABC transporter-related protein n=1 Tax=Chthonio... 542 e-152 UniRef50_C8NMU6 Excinuclease ABC, A subunit n=91 Tax=Bacteria Re... 541 e-152 UniRef50_Q7UK42 Excinuclease ABC subunit A n=1 Tax=Rhodopirellul... 541 e-152 UniRef50_C7FPB9 Excinuclease ATPase subunit n=1 Tax=uncultured b... 534 e-150 UniRef50_B2UL01 Excinuclease ABC, A subunit n=1 Tax=Akkermansia ... 529 e-148 UniRef50_Q6A9D4 UvrA-like ABC transporter n=2 Tax=Propionibacter... 527 e-148 UniRef50_B9XUD5 Putative uncharacterized protein n=2 Tax=Helicob... 524 e-147 UniRef50_UPI00019058DE excinuclease ABC subunit A n=1 Tax=Rhizob... 515 e-144 UniRef50_UPI0001B5406F UvrA-like protein n=1 Tax=Streptomyces sp... 515 e-144 UniRef50_A0M2R3 UvrABC system protein A-like n=1 Tax=Gramella fo... 496 e-138 UniRef50_A9U6S5 Predicted protein (Fragment) n=6 Tax=cellular or... 494 e-138 UniRef50_P52087 UvrABC system protein A (Fragment) n=44 Tax=Bact... 478 e-133 UniRef50_UPI00004C267E COG0178: Excinuclease ATPase subunit n=1 ... 468 e-130 UniRef50_C1ZJW2 Excinuclease ATPase subunit n=1 Tax=Planctomyces... 446 e-123 UniRef50_C9YE98 Putative uncharacterized protein n=1 Tax=Curviba... 435 e-120 UniRef50_A2V167 ABC transporter related n=1 Tax=Shewanella putre... 423 e-116 UniRef50_C9RLN7 ABC transporter related protein n=1 Tax=Fibrobac... 398 e-109 UniRef50_Q92AV6 Lin1813 protein n=1 Tax=Listeria innocua RepID=Q... 373 e-101 UniRef50_C6CND4 ABC transporter related n=1 Tax=Dickeya zeae Ech... 356 3e-96 UniRef50_C1ZCR5 Excinuclease ATPase subunit n=1 Tax=Planctomyces... 345 4e-93 UniRef50_B3SEI3 Putative uncharacterized protein (Fragment) n=1 ... 345 5e-93 UniRef50_Q4JUN2 Excinuclease ABC, subunit A n=2 Tax=Corynebacter... 340 2e-91 UniRef50_C9RP94 Excinuclease ATPase subunit-like protein n=1 Tax... 309 4e-82 UniRef50_Q12GF5 ABC transporter related n=28 Tax=Proteobacteria ... 265 6e-69 UniRef50_A4EWE8 Oligopeptide/dipeptide uptake family ABC transpo... 264 2e-68 UniRef50_B9JQ55 Peptide ABC transporter, ATP-binding protein n=1... 261 1e-67 UniRef50_A9CLQ7 ABC transporter, nucleotide binding/ATPase prote... 257 1e-66 UniRef50_A6UGQ4 ABC transporter related n=7 Tax=Proteobacteria R... 253 2e-65 UniRef50_B6W739 Putative uncharacterized protein n=1 Tax=Anaeroc... 252 4e-65 UniRef50_A1SZD0 ABC transporter for oligopeptide ATP-binding pro... 251 7e-65 UniRef50_A6GS20 Oligopeptide/dipeptide ABC transporter, ATPase s... 250 2e-64 UniRef50_Q13ND7 ABC peptide transporter, duplicated ATPase subun... 249 4e-64 UniRef50_B8F5L6 ABC transporter, ATP-binding protein n=6 Tax=Pro... 246 2e-63 UniRef50_Q11C74 Oligopeptide/dipeptide ABC transporter, ATPase s... 246 4e-63 UniRef50_D0KZE5 ABC transporter related protein n=228 Tax=cellul... 245 6e-63 UniRef50_B9JQI4 ABC transporter, ATP-binding protein n=1 Tax=Agr... 244 1e-62 UniRef50_O26254 Methyl coenzyme M reductase system, component A2... 243 2e-62 UniRef50_A5WE13 ABC transporter related n=7 Tax=Moraxellaceae Re... 242 3e-62 UniRef50_B1LYK0 ABC transporter related n=21 Tax=Bacteria RepID=... 242 3e-62 UniRef50_B1M6V7 ABC transporter related n=45 Tax=Bacteria RepID=... 241 8e-62 UniRef50_Q7M9Z2 ATP-BINDING COMPONENT OF ABC TRANSPORTER n=1 Tax... 241 8e-62 UniRef50_Q1GL17 Oligopeptide/dipeptide ABC transporter ATP-bindi... 241 1e-61 UniRef50_B6A1Z5 ABC transporter related n=17 Tax=Bacteria RepID=... 237 1e-60 UniRef50_B1KAP1 ABC transporter related n=7 Tax=Bacteria RepID=B... 234 1e-59 UniRef50_D1BEN4 ATPase component of various ABC-type transport s... 234 2e-59 UniRef50_Q4KBW6 Peptide ABC transporter, ATP-binding protein n=4... 234 2e-59 UniRef50_C7R1Y2 ABC transporter related n=12 Tax=Actinobacteria ... 232 5e-59 UniRef50_Q119Y6 ABC transporter related n=2 Tax=Oscillatoriales ... 232 5e-59 UniRef50_A3VG48 ABC oligopeptide transporter, fused ATPase subun... 232 6e-59 UniRef50_Q11IR9 ABC transporter related n=34 Tax=Alphaproteobact... 231 1e-58 UniRef50_D0LC89 ABC transporter related protein n=6 Tax=cellular... 231 1e-58 UniRef50_A7MK51 Putative uncharacterized protein n=1 Tax=Cronoba... 230 3e-58 UniRef50_Q11EZ7 ABC transporter related n=16 Tax=Bacteria RepID=... 229 4e-58 UniRef50_C5C220 ABC transporter related n=2 Tax=Actinobacteria (... 229 5e-58 UniRef50_C8Q309 ABC transporter related protein n=1 Tax=Pantoea ... 228 6e-58 UniRef50_C5C0X6 ABC transporter related n=2 Tax=Actinomycetales ... 228 7e-58 UniRef50_C6C523 ABC transporter related n=1 Tax=Dickeya dadantii... 226 3e-57 Sequences not found previously or not previously below threshold: UniRef50_D1C0E7 ABC transporter related protein n=5 Tax=Actinomy... 253 3e-65 UniRef50_C4ZK41 Oligopeptide/dipeptide ABC transporter, ATPase s... 251 7e-65 UniRef50_C2CTN2 Oligopeptide/dipeptide ABC superfamily ATP bindi... 251 8e-65 UniRef50_C7MY08 ATPase component of various ABC-type transport s... 245 5e-63 UniRef50_D1VG07 Oligopeptide/dipeptide ABC transporter, ATPase s... 244 1e-62 UniRef50_B9K4U3 ABC transporter nucleotide binding/ATPase protei... 244 1e-62 UniRef50_UPI0001B58B2B peptide ABC transporter, ATP-binding prot... 241 8e-62 UniRef50_B9JKV4 Oligopeptide ABC transporter n=23 Tax=Alphaprote... 239 3e-61 UniRef50_C4FE85 Putative uncharacterized protein n=1 Tax=Bifidob... 239 3e-61 UniRef50_Q7WJX8 ABC transport protein, ATP-binding component n=3... 239 4e-61 UniRef50_B3PHQ3 Peptide ABC transporter, ATP-binding protein n=1... 239 5e-61 UniRef50_A6X830 ABC transporter related n=2 Tax=Ochrobactrum ant... 239 5e-61 UniRef50_D2R3L2 ABC transporter related protein n=17 Tax=Bacteri... 238 6e-61 UniRef50_Q11BW9 Oligopeptide/dipeptide ABC transporter, ATPase s... 238 8e-61 UniRef50_A9WPA0 Oligopeptide transporter, ATPase protein n=5 Tax... 236 3e-60 UniRef50_A7IPD1 ABC transporter related n=5 Tax=Proteobacteria R... 236 5e-60 UniRef50_C1ZEI5 ABC-type uncharacterized transport system, dupli... 235 8e-60 UniRef50_B3Q6A8 ABC transporter related n=7 Tax=Bradyrhizobiacea... 234 9e-60 UniRef50_Q11HA0 ABC transporter related n=2 Tax=Alphaproteobacte... 234 2e-59 UniRef50_Q16B84 ABC transporter ATP-binding protein, putative n=... 233 3e-59 UniRef50_B0RFT6 Putative nucleotide-binding ABC transporter subu... 232 3e-59 UniRef50_Q2JPN6 Peptide/opine/nickel ABC transporter (PepT) fami... 232 4e-59 UniRef50_C1YT72 ATPase component of various ABC-type transport s... 231 1e-58 UniRef50_UPI0001C38A8A ABC transporter related protein n=1 Tax=A... 231 1e-58 UniRef50_C6CCU5 ABC transporter related n=4 Tax=Enterobacteriace... 231 2e-58 UniRef50_Q0T6D3 Glutathione import ATP-binding protein gsiA n=25... 230 2e-58 UniRef50_C7RUS4 Oligopeptide/dipeptide ABC transporter, ATPase s... 229 4e-58 UniRef50_A0NTH5 Putative peptide transport system atp-binding ab... 229 4e-58 UniRef50_A1TS75 ABC transporter-related protein n=3 Tax=Comamona... 228 9e-58 UniRef50_C7NGQ8 ATPase component of various ABC-type transport s... 227 1e-57 UniRef50_C3XJM3 ABC transporter ATP-binding protein n=2 Tax=Heli... 227 1e-57 UniRef50_A4XCW0 Oligopeptide/dipeptide ABC transporter, ATPase s... 227 1e-57 UniRef50_Q2T690 Dipeptide ABC transporter, ATP-binding protein, ... 227 2e-57 UniRef50_A6X3N3 ABC transporter related n=3 Tax=Rhizobiales RepI... 227 2e-57 UniRef50_A3K7U1 Putative ABC transporter ATP-binding protein n=1... 226 2e-57 UniRef50_A9DTL3 ABC peptide transporter, duplicated ATPase domai... 226 3e-57 UniRef50_Q21J38 ABC transporter related n=2 Tax=Gammaproteobacte... 226 3e-57 UniRef50_C6A8Q0 Dipeptide transport ATP-binding protein n=15 Tax... 226 4e-57 UniRef50_B7GSK8 ABC transporter related n=2 Tax=Bifidobacterium ... 226 4e-57 UniRef50_B6J470 Oligopeptide transport ATP-binding protein n=3 T... 226 4e-57 UniRef50_A1WS13 ABC transporter related n=13 Tax=Proteobacteria ... 225 7e-57 UniRef50_C5C8D8 ATPase component of various ABC-type transport s... 225 7e-57 UniRef50_C7MBI3 ATPase component of various ABC-type transport s... 224 1e-56 UniRef50_Q47NW7 ATPase components of various ABC-type transport ... 224 2e-56 UniRef50_A4AFN6 Putative ABC transporter, ATP-binding protein n=... 224 2e-56 UniRef50_A4EGJ4 Probable ABC transporter, ATP-binding protein n=... 223 3e-56 UniRef50_A4JN23 ABC transporter related n=24 Tax=Bacteria RepID=... 222 4e-56 UniRef50_C5BV59 ABC transporter related n=4 Tax=Actinobacteria (... 222 4e-56 >UniRef50_P0A196 UvrABC system protein A n=175 Tax=Bacteria RepID=UVRA_SALTI Length = 941 Score = 1241 bits (3210), Expect = 0.0, Method: Composition-based stats. Identities = 920/940 (97%), Positives = 936/940 (99%) Query: 1 MDKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAY 60 MDKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAY Sbjct: 1 MDKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAY 60 Query: 61 ARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRC 120 ARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRC Sbjct: 61 ARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRC 120 Query: 121 PDHDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARID 180 PDHDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARID Sbjct: 121 PDHDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARID 180 Query: 181 GEVCDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVADMDDP 240 GEVCDLSDPPKLELQKKHTIEVV+DRFKVR+DL+QRLAESFETALELSGGTAVVADMDD Sbjct: 181 GEVCDLSDPPKLELQKKHTIEVVIDRFKVRNDLSQRLAESFETALELSGGTAVVADMDDE 240 Query: 241 KAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPEL 300 KAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNP+L Sbjct: 241 KAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPDL 300 Query: 301 SLAGGAIRGWDRRNFYYFQMLKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKENIEFKY 360 SLAGGAIRGWDRRNFYYFQMLKSLA+HYKFDV+APW SLSANVHKVVLYGSGKENIEFKY Sbjct: 301 SLAGGAIRGWDRRNFYYFQMLKSLAEHYKFDVDAPWASLSANVHKVVLYGSGKENIEFKY 360 Query: 361 MNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGTRLRREARH 420 MNDRGDTS+RRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGTRL REARH Sbjct: 361 MNDRGDTSVRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGTRLNREARH 420 Query: 421 VYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTL 480 V+VENTPLPAISDMSIGHAM+FF NLKL+GQRAKIAEK+LKEIGDRLKFLVNVGLNYLTL Sbjct: 421 VFVENTPLPAISDMSIGHAMDFFTNLKLSGQRAKIAEKVLKEIGDRLKFLVNVGLNYLTL 480 Query: 481 SRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNT 540 SRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLR+LGNT Sbjct: 481 SRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRNLGNT 540 Query: 541 VIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEV 600 VIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEV Sbjct: 541 VIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEV 600 Query: 601 PKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQR 660 PK+RVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQR Sbjct: 601 PKQRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQR 660 Query: 661 QLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPE 720 QLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPE Sbjct: 661 QLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPE 720 Query: 721 SRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKY 780 SR+RGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKY Sbjct: 721 SRSRGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKY 780 Query: 781 KGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKL 840 KGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKL Sbjct: 781 KGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKL 840 Query: 841 ARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADW 900 ARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLH+LRDQGNTIVVIEHNLDVIKTADW Sbjct: 841 ARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHQLRDQGNTIVVIEHNLDVIKTADW 900 Query: 901 IVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLKPML 940 IVDLGPEGGSGGGEILV+GTPETVAECEASHTARFLKPML Sbjct: 901 IVDLGPEGGSGGGEILVAGTPETVAECEASHTARFLKPML 940 >UniRef50_P44410 UvrABC system protein A n=133 Tax=cellular organisms RepID=UVRA_HAEIN Length = 943 Score = 1227 bits (3176), Expect = 0.0, Method: Composition-based stats. Identities = 765/940 (81%), Positives = 856/940 (91%) Query: 1 MDKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAY 60 M+ I++RGARTHNLKNINL IPR+KL+V+TGLSGSGKSSLAFDTLYAEGQRRYVESLSAY Sbjct: 1 MENIDIRGARTHNLKNINLTIPRNKLVVITGLSGSGKSSLAFDTLYAEGQRRYVESLSAY 60 Query: 61 ARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRC 120 ARQFLSLMEKPDVD IEGLSPAISIEQKSTSHNPRSTVGTITEI+DYLRLLFARVGEPRC Sbjct: 61 ARQFLSLMEKPDVDSIEGLSPAISIEQKSTSHNPRSTVGTITEIYDYLRLLFARVGEPRC 120 Query: 121 PDHDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARID 180 PDH+VPL AQT+SQMVD VLS PE ++MLLAP++K RKGEH K LEN+A+QGYIRARID Sbjct: 121 PDHNVPLTAQTISQMVDKVLSLPEDSKMMLLAPVVKNRKGEHVKILENIAAQGYIRARID 180 Query: 181 GEVCDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVADMDDP 240 GE+CDLSDPPKL LQKKHTIEVVVDRFKVR DL RLAESFETALELSGGTA+VA+MD+P Sbjct: 181 GEICDLSDPPKLALQKKHTIEVVVDRFKVRSDLATRLAESFETALELSGGTAIVAEMDNP 240 Query: 241 KAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPEL 300 KAEEL+FSANFACP CGYS+ ELEPRLFSFNNPAGACPTCDGLGVQQYFD DRV+QNP + Sbjct: 241 KAEELVFSANFACPHCGYSVPELEPRLFSFNNPAGACPTCDGLGVQQYFDEDRVVQNPTI 300 Query: 301 SLAGGAIRGWDRRNFYYFQMLKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKENIEFKY 360 SLAGGA++GWDRRNFYY+QML SLA HY FDVEAP+ SL + ++++GSGKE IEF+Y Sbjct: 301 SLAGGAVKGWDRRNFYYYQMLTSLAKHYHFDVEAPYESLPKKIQHIIMHGSGKEEIEFQY 360 Query: 361 MNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGTRLRREARH 420 MNDRGD IR+HPFEG+L+NM RRYKETES +VREELAK ISNRPC C G+RLR EAR+ Sbjct: 361 MNDRGDVVIRKHPFEGILNNMARRYKETESMSVREELAKNISNRPCIDCGGSRLRPEARN 420 Query: 421 VYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTL 480 VY+ T LP I++ SIG +EFF L L GQ+A+IAEKILKEI +RL+FLVNVGLNYL+L Sbjct: 421 VYIGRTNLPIIAEKSIGETLEFFTALSLTGQKAQIAEKILKEIRERLQFLVNVGLNYLSL 480 Query: 481 SRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNT 540 SRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLL TLIHLR+LGNT Sbjct: 481 SRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLNTLIHLRNLGNT 540 Query: 541 VIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEV 600 VIVVEHDEDAIRAADH+IDIGPGAGVHGG+V+A+G + IM P S+TG+++SG KIE+ Sbjct: 541 VIVVEHDEDAIRAADHIIDIGPGAGVHGGQVIAQGNADEIMLNPNSITGKFLSGADKIEI 600 Query: 601 PKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQR 660 PKKR + +K LKL GA GNNLK+V L +PVGLFTC+TGVSGSGKSTLINDTLFP+AQ Sbjct: 601 PKKRTALDKKKWLKLKGASGNNLKNVNLDIPVGLFTCVTGVSGSGKSTLINDTLFPLAQN 660 Query: 661 QLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPE 720 LN A + APY+ I+GLEHFDKVIDI+QSPIGRTPRSNPATYTG+FTP+RELFAGVPE Sbjct: 661 ALNRAEKTDYAPYQSIEGLEHFDKVIDINQSPIGRTPRSNPATYTGLFTPIRELFAGVPE 720 Query: 721 SRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKY 780 +RARGY PGRFSFNVRGGRCEACQGDGV+KVEMHFLPD+YVPCDQCKGKRYNRETLEI+Y Sbjct: 721 ARARGYNPGRFSFNVRGGRCEACQGDGVLKVEMHFLPDVYVPCDQCKGKRYNRETLEIRY 780 Query: 781 KGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKL 840 KGKTIH+VLDMT+EEAREFFDA+P +ARKLQTLMDVGL+YIRLGQS+TTLSGGEAQRVKL Sbjct: 781 KGKTIHQVLDMTVEEAREFFDAIPMIARKLQTLMDVGLSYIRLGQSSTTLSGGEAQRVKL 840 Query: 841 ARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADW 900 A ELSKR TG+TLYILDEPTTGLHFADI+QLL+VLH+LRDQGNTIVVIEHNLDVIKTADW Sbjct: 841 ATELSKRDTGKTLYILDEPTTGLHFADIKQLLEVLHRLRDQGNTIVVIEHNLDVIKTADW 900 Query: 901 IVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLKPML 940 IVDLGPEGGSGGG+I+ +GTPE VA+ +SHTARFLKP+L Sbjct: 901 IVDLGPEGGSGGGQIIATGTPEQVAKVTSSHTARFLKPIL 940 >UniRef50_Q8ZJ07 UvrABC system protein A n=84 Tax=Bacteria RepID=UVRA_YERPE Length = 947 Score = 1217 bits (3149), Expect = 0.0, Method: Composition-based stats. Identities = 854/940 (90%), Positives = 903/940 (96%) Query: 1 MDKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAY 60 MD IEVRGARTHNLKNINL+IPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAY Sbjct: 1 MDNIEVRGARTHNLKNINLIIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAY 60 Query: 61 ARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRC 120 ARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRC Sbjct: 61 ARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRC 120 Query: 121 PDHDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARID 180 PDHDVPLAAQTVSQMVDNV+SQPEG+RLMLLAP++K+RKGEHTK LENLA+QGYIRARID Sbjct: 121 PDHDVPLAAQTVSQMVDNVISQPEGRRLMLLAPVVKDRKGEHTKILENLAAQGYIRARID 180 Query: 181 GEVCDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVADMDDP 240 GEVCDLSDPPKLELQKKHTIEVVVDRFKVR+DL QRLAESFETAL LSGGTAVVADMDDP Sbjct: 181 GEVCDLSDPPKLELQKKHTIEVVVDRFKVREDLAQRLAESFETALALSGGTAVVADMDDP 240 Query: 241 KAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPEL 300 EELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQ+FDPDRV+QNPEL Sbjct: 241 HVEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQFFDPDRVLQNPEL 300 Query: 301 SLAGGAIRGWDRRNFYYFQMLKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKENIEFKY 360 SLAGGAIRGWDRRNFYYFQML+SLA+HYKFD+EAP+ SL + V + VLYGSGK+ IEFKY Sbjct: 301 SLAGGAIRGWDRRNFYYFQMLRSLAEHYKFDIEAPFNSLDSAVQQAVLYGSGKDTIEFKY 360 Query: 361 MNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGTRLRREARH 420 +NDRGDT++RRHPFEGVLHNMERRYKETESSAVREELAKFISNR CASC GTRLRREAR+ Sbjct: 361 INDRGDTTVRRHPFEGVLHNMERRYKETESSAVREELAKFISNRSCASCSGTRLRREARY 420 Query: 421 VYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTL 480 V+VENT LP IS++SIGHA+ FF N+KL+GQRA+IAEKILKEIGDRLKFLVNVGLNYL+L Sbjct: 421 VFVENTTLPEISELSIGHALSFFQNMKLSGQRAQIAEKILKEIGDRLKFLVNVGLNYLSL 480 Query: 481 SRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNT 540 SRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLL TLIHLR+LGNT Sbjct: 481 SRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLETLIHLRNLGNT 540 Query: 541 VIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEV 600 VIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEG ++ IMA P SLTGQ++SGKR I + Sbjct: 541 VIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGTVDDIMAAPASLTGQFLSGKRSIAI 600 Query: 601 PKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQR 660 P+KRV A+P KVLKL GA GNNLKDVTLTLPVGLF+CITGVSGSGKSTLINDTL+ IAQR Sbjct: 601 PEKRVSADPSKVLKLIGATGNNLKDVTLTLPVGLFSCITGVSGSGKSTLINDTLYSIAQR 660 Query: 661 QLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPE 720 QLNGATI EPAPYR+IQGLEHFDKVIDIDQSPIGRTPRSNPATYTG+FTP+RELFAGVPE Sbjct: 661 QLNGATITEPAPYREIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGIFTPIRELFAGVPE 720 Query: 721 SRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKY 780 SR RGYTPGRFSFNV+GGRCEACQGDGVIKVEMHFLPDIYVPCD CKGKRYNRETLE+KY Sbjct: 721 SRTRGYTPGRFSFNVKGGRCEACQGDGVIKVEMHFLPDIYVPCDHCKGKRYNRETLEVKY 780 Query: 781 KGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKL 840 KGK+IHEVL MTIEEAREFFDAVPALARKLQTL+DVGL+YI LGQSATTLSGGEAQRVKL Sbjct: 781 KGKSIHEVLAMTIEEAREFFDAVPALARKLQTLIDVGLSYICLGQSATTLSGGEAQRVKL 840 Query: 841 ARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADW 900 +RELSKRGTGQTLYILDEPTTGLHFADIQQLL VLH+LRDQGNTIVVIEHNLDVIKTADW Sbjct: 841 SRELSKRGTGQTLYILDEPTTGLHFADIQQLLAVLHQLRDQGNTIVVIEHNLDVIKTADW 900 Query: 901 IVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLKPML 940 IVDLGPEGGSGGGEILVSGTPETVAEC ASHTARFLKPML Sbjct: 901 IVDLGPEGGSGGGEILVSGTPETVAECAASHTARFLKPML 940 >UniRef50_Q88QK7 UvrABC system protein A n=91 Tax=cellular organisms RepID=UVRA_PSEPK Length = 944 Score = 1212 bits (3137), Expect = 0.0, Method: Composition-based stats. Identities = 707/940 (75%), Positives = 826/940 (87%), Gaps = 1/940 (0%) Query: 1 MDKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAY 60 MDKI +RGARTHNLKNI+L +PRDKLIV+TGLSGSGKSSLAFDTLYAEGQRRYVESLSAY Sbjct: 1 MDKILIRGARTHNLKNIDLTLPRDKLIVITGLSGSGKSSLAFDTLYAEGQRRYVESLSAY 60 Query: 61 ARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRC 120 ARQFLS+MEKPDVD IEGLSPAISIEQKSTSHNPRSTVGTITEI+DYLRLL+ARVG PRC Sbjct: 61 ARQFLSMMEKPDVDTIEGLSPAISIEQKSTSHNPRSTVGTITEIYDYLRLLYARVGTPRC 120 Query: 121 PDHDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARID 180 PDHD+PL AQT+SQMVD VL +PEG +LMLLAP+++ERKGEH + L +QG++RAR++ Sbjct: 121 PDHDIPLEAQTISQMVDLVLERPEGSKLMLLAPVVRERKGEHLAVFDELRAQGFVRARVN 180 Query: 181 GEVCDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVADMDDP 240 G++ +L + PKL+ QKKH+I+VVVDRFKVR DL QRLAESFETAL+L+ G A+VA MDD Sbjct: 181 GKLYELDELPKLDKQKKHSIDVVVDRFKVRADLQQRLAESFETALKLADGIALVAPMDDE 240 Query: 241 KAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPEL 300 + EE +FSA FACP+CG+++ ELEP+LFSFNNPAGACPTCDGLGV+Q+FD R++ N EL Sbjct: 241 QGEETIFSARFACPVCGHAISELEPKLFSFNNPAGACPTCDGLGVKQFFDTKRLV-NTEL 299 Query: 301 SLAGGAIRGWDRRNFYYFQMLKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKENIEFKY 360 +LA GAIRGWDRRN YYFQML SLA HY F +E P+G LSA KV+L GSGK++++FKY Sbjct: 300 TLAEGAIRGWDRRNVYYFQMLGSLAAHYGFSLEEPFGELSAEHQKVILQGSGKQSVDFKY 359 Query: 361 MNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGTRLRREARH 420 +NDRGD R HPFEG++ N+ERRY+ETES+ VREELAKF+ +PC C GTRLRREARH Sbjct: 360 LNDRGDIVKRSHPFEGIVPNLERRYRETESATVREELAKFLGTQPCPDCRGTRLRREARH 419 Query: 421 VYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTL 480 V+V LPA++++ IG A +F L L G+R +IA KILKEI +RL+FLVNVGL+YLTL Sbjct: 420 VWVGEKTLPAVTNLPIGEASNYFGQLTLTGRRGEIAAKILKEICERLQFLVNVGLDYLTL 479 Query: 481 SRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNT 540 RSA+TLSGGEAQRIRLASQIGAGLVGVMY+LDEPSIGLHQRDN+RLL TL HLRDLGNT Sbjct: 480 DRSADTLSGGEAQRIRLASQIGAGLVGVMYILDEPSIGLHQRDNDRLLATLNHLRDLGNT 539 Query: 541 VIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEV 600 VIVVEHDEDAIR AD+V+DIGPGAGVHGG++VAEG + +M P+SLTG+Y+SG++KI V Sbjct: 540 VIVVEHDEDAIRLADYVVDIGPGAGVHGGQIVAEGSPQEVMDHPDSLTGKYLSGRKKIVV 599 Query: 601 PKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQR 660 P KR P N + LKL GARGNNL++V L +P+GL TC+TGVSGSGKSTLIN+TL+P+A Sbjct: 600 PAKRTPRNKKLQLKLKGARGNNLQNVDLEVPIGLLTCVTGVSGSGKSTLINNTLYPLAAT 659 Query: 661 QLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPE 720 LNGA+ E AP+ + GL+H DKV+DIDQSPIGRTPRSNPATYTG+FTP+RELF+GVPE Sbjct: 660 ALNGASSLEAAPHSSMDGLQHLDKVVDIDQSPIGRTPRSNPATYTGIFTPIRELFSGVPE 719 Query: 721 SRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKY 780 SR+RGY PGRFSFNV+GGRCEACQGDG+IKVEMHFLPDIYVPCD CK KRYNRETLEIKY Sbjct: 720 SRSRGYGPGRFSFNVKGGRCEACQGDGLIKVEMHFLPDIYVPCDVCKSKRYNRETLEIKY 779 Query: 781 KGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKL 840 KGK IHEVL+MTIE+AREFFDAVPALARKLQTLMDVGL+YI+LGQSATTLSGGEAQRVKL Sbjct: 780 KGKNIHEVLEMTIEDAREFFDAVPALARKLQTLMDVGLSYIKLGQSATTLSGGEAQRVKL 839 Query: 841 ARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADW 900 +RELSKR TG+TLYILDEPTTGLHFADIQQLLDVLH+LRD GNT+VVIEHNLDVIKTADW Sbjct: 840 SRELSKRDTGKTLYILDEPTTGLHFADIQQLLDVLHRLRDHGNTVVVIEHNLDVIKTADW 899 Query: 901 IVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLKPML 940 +VDLGPEGGS GG+I+ GTPE ++E + S+T +LKP+L Sbjct: 900 LVDLGPEGGSKGGQIIACGTPEELSEMKQSYTGHYLKPLL 939 >UniRef50_C9KNX7 Excinuclease ABC subunit A n=2 Tax=Bacteria RepID=C9KNX7_9FIRM Length = 944 Score = 1184 bits (3063), Expect = 0.0, Method: Composition-based stats. Identities = 556/942 (59%), Positives = 700/942 (74%), Gaps = 8/942 (0%) Query: 2 DKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYA 61 I ++GAR HNLKNI++ IPRDKL+V+TGLSGSGKSSLAFDT+YAEGQRRYVESLS+YA Sbjct: 3 KYIRIKGARAHNLKNIDVNIPRDKLVVITGLSGSGKSSLAFDTIYAEGQRRYVESLSSYA 62 Query: 62 RQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCP 121 RQFL M+KPDVD I+GLSPAISI+QK+TSHNPRSTVGT+TEI+DYLRLLFAR G P CP Sbjct: 63 RQFLGQMDKPDVDQIDGLSPAISIDQKTTSHNPRSTVGTVTEIYDYLRLLFARAGHPHCP 122 Query: 122 DHDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARIDG 181 P+ Q+V QM+D + PE +L+++A +++ +KGEH K L ++ +GY+R RIDG Sbjct: 123 KCGKPITQQSVDQMIDQIRELPERTKLLVMAQVVRGKKGEHKKVLAHIRHEGYVRVRIDG 182 Query: 182 EVCDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVADMDDPK 241 EV D+ + +LE KKHTIEVV+DR VR+ + RLA+S ETAL+L G A V +D Sbjct: 183 EVMDIGEDIQLEKNKKHTIEVVIDRLVVREGMESRLADSLETALKLGEGVAYVQIVD--- 239 Query: 242 AEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPELS 301 E L+FS NFAC CG S+ E+ PR+FSFNNP GACP C GLG FD + V+ +P LS Sbjct: 240 GELLMFSENFACVDCGISLPEITPRMFSFNNPYGACPVCMGLGSHMEFDEELVLPDPTLS 299 Query: 302 LAGGAIRGWDRR-NFYYFQMLKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKENIEFKY 360 + GG + + Y ++K++ + + +E PW + +V+LYGSG+E F+Y Sbjct: 300 VGGGVFAPLSKNLHSYAMCVMKAILEKRGYSLETPWQEIDKKTQQVLLYGSGEERFTFRY 359 Query: 361 MNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGTRLRREARH 420 N G+ PFEGV+ + RRY ET+S +RE +++ PC +C G RL+ E Sbjct: 360 TNMFGEDKEYFVPFEGVMPLLARRYHETDSDEMRESYENYMTEIPCKACHGARLKPETLA 419 Query: 421 VYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTL 480 V V + ++ M+I A FF +L L + KIA +ILKEI RL FL++VGL+YLTL Sbjct: 420 VTVGGKNIDEVTRMTIREADAFFTHLTLTPREMKIAAQILKEIHARLHFLLDVGLDYLTL 479 Query: 481 SRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNT 540 SRSA TLSGGEAQRIRLA+QIG+GL GV+YVLDEPSIGLHQRDN RLL TL HLRDLGNT Sbjct: 480 SRSAGTLSGGEAQRIRLATQIGSGLQGVLYVLDEPSIGLHQRDNNRLLATLKHLRDLGNT 539 Query: 541 VIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEV 600 +IVVEHDED + AADH+IDIGPGAG +GG VVAEG E I P+S+TG Y+S ++ I V Sbjct: 540 LIVVEHDEDTMYAADHIIDIGPGAGANGGRVVAEGTAEEIKKNPDSITGAYLSRRKFIPV 599 Query: 601 PKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQR 660 P KR K +++ GA NNLKD+T+ P+G T +TGVSGSGKSTL+N+ L+ Sbjct: 600 PAKRR-PGNGKFIEVVGAAENNLKDLTVKFPLGTLTLVTGVSGSGKSTLVNEILYKGIAS 658 Query: 661 QLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPE 720 +L A +P ++ I+GLE+ DK+IDIDQ PIGRTPRSNPATYTGVF +RELF+ E Sbjct: 659 RLYHAK-GKPGKHKKIKGLENIDKIIDIDQQPIGRTPRSNPATYTGVFDAIRELFSQTSE 717 Query: 721 SRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKY 780 +R RGY GRFSFNV+GGRCEAC+GDG++K+EMHFLPD+YVPC+ CKG RYNRETLE++Y Sbjct: 718 ARMRGYKAGRFSFNVKGGRCEACKGDGILKIEMHFLPDVYVPCEVCKGARYNRETLEVRY 777 Query: 781 KGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKL 840 KGK I EVLDMTI+EA EFF VP +ARKLQ + DVGL YI+LGQ ATTLSGGEAQRVKL Sbjct: 778 KGKNISEVLDMTIDEAVEFFANVPRIARKLQIIQDVGLGYIKLGQPATTLSGGEAQRVKL 837 Query: 841 ARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADW 900 A ELS+R TG+TLYILDEPTTGLH ADI +LLD+L +L G+T+VVIEHNLDVIKTAD+ Sbjct: 838 ATELSRRSTGKTLYILDEPTTGLHTADIHKLLDILQRLVAGGDTVVVIEHNLDVIKTADY 897 Query: 901 IVDLGPEGGSGGGEILVSGTPET--VAECEASHTARFLKPML 940 I+DLGPEGG GG ++ +G PE + + AS+T +FL+P+L Sbjct: 898 IIDLGPEGGDKGGTVVATGRPEDIVIVKVPASYTGKFLRPLL 939 Score = 85.4 bits (210), Expect = 8e-15, Method: Composition-based stats. Identities = 37/118 (31%), Positives = 58/118 (49%), Gaps = 6/118 (5%) Query: 609 PEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIA 668 EK +++ GAR +NLK++ + +P ITG+SGSGKS+L DT++ QR+ + + Sbjct: 1 MEKYIRIKGARAHNLKNIDVNIPRDKLVVITGLSGSGKSSLAFDTIYAEGQRRYVESLSS 60 Query: 669 EPAPYRDIQGLEHFDKV------IDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPE 720 + D++ I IDQ PRS T T ++ +R LFA Sbjct: 61 YARQFLGQMDKPDVDQIDGLSPAISIDQKTTSHNPRSTVGTVTEIYDYLRLLFARAGH 118 >UniRef50_Q5HHQ9 UvrABC system protein A n=172 Tax=cellular organisms RepID=UVRA_STAAC Length = 948 Score = 1182 bits (3058), Expect = 0.0, Method: Composition-based stats. Identities = 546/939 (58%), Positives = 722/939 (76%), Gaps = 6/939 (0%) Query: 3 KIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYAR 62 I V+GAR HNLK+I++ +P++KLIV+TGLSGSGKSSLAFDT+YAEGQRRYVESLSAYAR Sbjct: 5 SIVVKGARAHNLKDIDIELPKNKLIVMTGLSGSGKSSLAFDTIYAEGQRRYVESLSAYAR 64 Query: 63 QFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCPD 122 QFL M+KPDVD IEGLSPAISI+QK+TS NPRSTV T+TEI+DY+RLL+ARVG+P CP+ Sbjct: 65 QFLGQMDKPDVDTIEGLSPAISIDQKTTSKNPRSTVATVTEIYDYIRLLYARVGKPYCPN 124 Query: 123 HDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARIDGE 182 H++ + +QTV QMVD ++ ++ LLAP+I RKG H K +E++ +GY+R RIDGE Sbjct: 125 HNIEIESQTVQQMVDRIMELEARTKIQLLAPVIAHRKGSHEKLIEDIGKKGYVRLRIDGE 184 Query: 183 VCDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVADMDDPKA 242 + D++D P L+ K HTIEVVVDR V+D + RLA+S ETALELS G V +D Sbjct: 185 IVDVNDVPTLDKNKNHTIEVVVDRLVVKDGIETRLADSIETALELSEGQLTVDVID---G 241 Query: 243 EELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPELSL 302 E+L FS + ACPICG+S+ ELEPR+FSFN+P GACPTCDGLG + D D V+ + + +L Sbjct: 242 EDLKFSESHACPICGFSIGELEPRMFSFNSPFGACPTCDGLGQKLTVDVDLVVPDKDKTL 301 Query: 303 AGGAIRGW-DRRNFYYFQMLKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKENIEFKYM 361 GAI W + +Y +LK + + YK +++ P+ L+ ++LYGSG + IEF + Sbjct: 302 NEGAIEPWIPTSSDFYPTLLKRVCEVYKINMDKPFKKLTERQRDILLYGSGDKEIEFTFT 361 Query: 362 NDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGTRLRREARHV 421 +G T R FEGV+ N+ RR+ E+ S RE ++K+++ PC +C G RL REA V Sbjct: 362 QRQGGTRKRTMVFEGVVPNISRRFHESPSEYTREMMSKYMTELPCETCHGKRLSREALSV 421 Query: 422 YVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTLS 481 YV + + + SI A+ ++ N+ L+ Q IA +ILKEI RL FL NVGL YLTL+ Sbjct: 422 YVGGLNIGEVVEYSISQALNYYKNIDLSEQDQAIANQILKEIISRLTFLNNVGLEYLTLN 481 Query: 482 RSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTV 541 R++ TLSGGEAQRIRLA+QIG+ L GV+YVLDEPSIGLHQRDN+RL+ TL +RDLGNT+ Sbjct: 482 RASGTLSGGEAQRIRLATQIGSRLTGVLYVLDEPSIGLHQRDNDRLINTLKEMRDLGNTL 541 Query: 542 IVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEVP 601 IVVEHD+D +RAAD+++DIGPGAG HGG++V+ G + +M +SLTGQY+SGK++IEVP Sbjct: 542 IVVEHDDDTMRAADYLVDIGPGAGEHGGQIVSSGTPQKVMKDKKSLTGQYLSGKKRIEVP 601 Query: 602 KKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQ 661 + R PA+ K + + GAR NNLK V + +P+ + T +TGVSGSGKS+L+N+ L+ ++ Sbjct: 602 EYRRPASDRK-ISIRGARSNNLKGVDVDIPLSIMTVVTGVSGSGKSSLVNEVLYKSLAQK 660 Query: 662 LNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPES 721 +N + + +P Y I+G++ DK+IDIDQSPIGRTPRSNPATYTGVF +R++FA E+ Sbjct: 661 INKSKV-KPGLYDKIEGIDQLDKIIDIDQSPIGRTPRSNPATYTGVFDDIRDVFAQTNEA 719 Query: 722 RARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKYK 781 + RGY GRFSFNV+GGRCEAC+GDG+IK+EMHFLPD+YVPC+ C GKRYNRETLE+ YK Sbjct: 720 KIRGYQKGRFSFNVKGGRCEACKGDGIIKIEMHFLPDVYVPCEVCDGKRYNRETLEVTYK 779 Query: 782 GKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLA 841 GK I ++L+MT+EEA +FF+ +P + RKLQTL+DVGL Y+ LGQ ATTLSGGEAQRVKLA Sbjct: 780 GKNIADILEMTVEEATQFFENIPKIKRKLQTLVDVGLGYVTLGQQATTLSGGEAQRVKLA 839 Query: 842 RELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADWI 901 EL KR TG+++YILDEPTTGLH DI +LL VL++L + G+T+V+IEHNLDVIKTAD+I Sbjct: 840 SELHKRSTGKSIYILDEPTTGLHVDDISRLLKVLNRLVENGDTVVIIEHNLDVIKTADYI 899 Query: 902 VDLGPEGGSGGGEILVSGTPETVAECEASHTARFLKPML 940 +DLGPEGGSGGG I+ +GTPE +A+ ++S+T ++LK +L Sbjct: 900 IDLGPEGGSGGGTIVATGTPEDIAQTKSSYTGKYLKEVL 938 >UniRef50_Q87BK9 UvrABC system protein A n=247 Tax=cellular organisms RepID=UVRA_XYLFT Length = 965 Score = 1182 bits (3057), Expect = 0.0, Method: Composition-based stats. Identities = 661/937 (70%), Positives = 791/937 (84%), Gaps = 1/937 (0%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 63 I +RGARTHNLKN++L +PR+ LIV+TGLSGSGKSSLAFDT+YAEGQRRYVESLSAYARQ Sbjct: 5 IRIRGARTHNLKNLDLDLPRNTLIVITGLSGSGKSSLAFDTIYAEGQRRYVESLSAYARQ 64 Query: 64 FLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCPDH 123 FLS+MEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEI+DYLRLL+ARVG+PRCP+H Sbjct: 65 FLSVMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIYDYLRLLYARVGQPRCPEH 124 Query: 124 DVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARIDGEV 183 PL AQTVSQMVD+VL+ +R MLLAP+++ERKGEHT+ E L +QG++R R+DGE+ Sbjct: 125 HYPLEAQTVSQMVDHVLTLDPEQRYMLLAPVVRERKGEHTQVFEQLRAQGFVRVRVDGEL 184 Query: 184 CDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVADMDDPKAE 243 ++ P L L++KHTIE V+DRF+ R+D+ QRLAESFETAL+L G A V +D A Sbjct: 185 YEIDAVPTLTLRQKHTIEAVIDRFRPREDIKQRLAESFETALKLGNGMASVQTLDTTTAT 244 Query: 244 ELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPELSLA 303 LFS+ ++CP+C YS+ ELEPRLFSFN P GACP C+GLGV ++FDP +V+ +P+LSL+ Sbjct: 245 PHLFSSKYSCPVCDYSLPELEPRLFSFNAPMGACPACNGLGVTEFFDPAKVVIHPDLSLS 304 Query: 304 GGAIRGWDRRNFYYFQMLKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKENIEFKYMND 363 GA+RGWDRRN YYFQ++ SLA HY FD++A W SL + +L+GSG E I F Y+ + Sbjct: 305 AGAVRGWDRRNAYYFQLIASLAKHYTFDIDASWESLPEEIRHTILFGSGDEQINFTYLTE 364 Query: 364 RGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGTRLRREARHVYV 423 G + R+H FEG++ N+ERRY+ETES+AVREELAK++S R C C GTRL R AR+V+V Sbjct: 365 AGGRTKRKHRFEGIVPNLERRYRETESAAVREELAKYVSTRTCPECGGTRLNRAARNVFV 424 Query: 424 ENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTLSRS 483 + LP ++ + I A+EFF L+L+G R +IA KI+KEIG+RL FLV+VGL+YLTL R Sbjct: 425 ADRTLPELTVLPINDALEFFKTLRLSGWRGEIAIKIVKEIGERLGFLVDVGLDYLTLERK 484 Query: 484 AETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIV 543 A+TLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTL LRDLGNTVIV Sbjct: 485 ADTLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLTRLRDLGNTVIV 544 Query: 544 VEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEVPKK 603 VEHDEDAIR ADH++DIGPGAGVHGGE+ A+G LE IMA P SLTGQY+SG+R+IE+PK+ Sbjct: 545 VEHDEDAIRQADHILDIGPGAGVHGGEICAQGSLEQIMAAPRSLTGQYLSGRRRIEIPKQ 604 Query: 604 RVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLN 663 R P N K+L L GA GNNLK V L +P GLFTCITGVSGSGKSTLINDTLF +A ++N Sbjct: 605 RHPPNATKMLHLRGACGNNLKGVNLDIPEGLFTCITGVSGSGKSTLINDTLFTLAANEIN 664 Query: 664 GATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESRA 723 GA+ APY + GLE FDKV+DIDQSPIGRTPRSNPATYTG+FTP+RELFA VPE+RA Sbjct: 665 GASHP-IAPYASVDGLELFDKVVDIDQSPIGRTPRSNPATYTGMFTPLRELFAQVPEARA 723 Query: 724 RGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKYKGK 783 RGY+PGRFSFNVRGGRCEAC+GDG+IKVEMHFLPD+YVPCD C GKRYNRETLEI+YKG Sbjct: 724 RGYSPGRFSFNVRGGRCEACEGDGLIKVEMHFLPDVYVPCDICHGKRYNRETLEIRYKGY 783 Query: 784 TIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARE 843 I++VL+MT+E+A + F+AVPA+ARKL+TL+DVGL+Y++LGQSATTLSGGEAQRVKL++E Sbjct: 784 NINDVLEMTVEDALKLFEAVPAIARKLETLVDVGLSYLKLGQSATTLSGGEAQRVKLSKE 843 Query: 844 LSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADWIVD 903 LS+R TG TLYILDEPTTGLHF DI+ LL V+HKLRD GNT++VIEHNLDVIKTADW++D Sbjct: 844 LSRRDTGHTLYILDEPTTGLHFYDIEALLAVMHKLRDAGNTVIVIEHNLDVIKTADWVID 903 Query: 904 LGPEGGSGGGEILVSGTPETVAECEASHTARFLKPML 940 LGPEGG GGEILV+GTPETVA SHT FL +L Sbjct: 904 LGPEGGGRGGEILVAGTPETVAAHPHSHTGHFLAKLL 940 Score = 97.0 bits (240), Expect = 3e-18, Method: Composition-based stats. Identities = 41/122 (33%), Positives = 56/122 (45%), Gaps = 7/122 (5%) Query: 2 DKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYA 61 + +RGA +NLK +NL IP +TG+SGSGKS+L DTL+ + A Sbjct: 612 KMLHLRGACGNNLKGVNLDIPEGLFTCITGVSGSGKSTLINDTLFTLAANEINGASHPIA 671 Query: 62 RQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCP 121 VD +E + I+Q PRS T T + LR LFA+V E R Sbjct: 672 -------PYASVDGLELFDKVVDIDQSPIGRTPRSNPATYTGMFTPLRELFAQVPEARAR 724 Query: 122 DH 123 + Sbjct: 725 GY 726 Score = 83.1 bits (204), Expect = 5e-14, Method: Composition-based stats. Identities = 38/120 (31%), Positives = 60/120 (50%), Gaps = 6/120 (5%) Query: 609 PEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIA 668 ++++ GAR +NLK++ L LP ITG+SGSGKS+L DT++ QR+ + A Sbjct: 1 MTALIRIRGARTHNLKNLDLDLPRNTLIVITGLSGSGKSSLAFDTIYAEGQRRYVESLSA 60 Query: 669 EPAPYRDIQGLEHFDKV------IDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESR 722 + + D + I I+Q PRS T T ++ +R L+A V + R Sbjct: 61 YARQFLSVMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIYDYLRLLYARVGQPR 120 >UniRef50_Q8ENJ6 UvrABC system protein A n=258 Tax=cellular organisms RepID=UVRA_OCEIH Length = 958 Score = 1180 bits (3053), Expect = 0.0, Method: Composition-based stats. Identities = 553/941 (58%), Positives = 719/941 (76%), Gaps = 7/941 (0%) Query: 2 DKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYA 61 I+++GARTHNLK+I++ IP++KL+V+TGLSGSGKSSLAFDT+YAEGQRRYVESLS+YA Sbjct: 4 KSIKIQGARTHNLKDIDIDIPKNKLVVLTGLSGSGKSSLAFDTIYAEGQRRYVESLSSYA 63 Query: 62 RQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCP 121 RQFL M+KPDVD IEGLSPAISI+QK+TS NPRSTVGT+TEI+DYLRLL+ARVG P CP Sbjct: 64 RQFLGQMDKPDVDVIEGLSPAISIDQKTTSKNPRSTVGTVTEIYDYLRLLYARVGRPTCP 123 Query: 122 DHDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARIDG 181 +H + +++QTV QMVD +L PE +L +LAP++ RKGEH K LENL +GY+R R+D Sbjct: 124 NHGIEISSQTVQQMVDRILEYPERTKLQILAPVVSGRKGEHVKILENLKQEGYVRIRVDN 183 Query: 182 EVCDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVADMDDPK 241 E+ +++D +LE KKH+IEVV+DR V+D + RL++S ETAL+L G +V + + Sbjct: 184 EMREVTDDIQLEKNKKHSIEVVIDRIVVKDGVASRLSDSIETALKLGEGNIIVDVIGE-- 241 Query: 242 AEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPELS 301 EEL FS N ACPICG+S+ ELEPRLFSFN+P GACP+CDGLG + D D VI + E + Sbjct: 242 -EELTFSENHACPICGFSIGELEPRLFSFNSPFGACPSCDGLGTKLEVDIDLVIPDWEKT 300 Query: 302 LAGGAIRGWDR-RNFYYFQMLKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKENIEFKY 360 L AI W+ + YY Q+LKS+ +H+ D++ P + ++L GSGKE I+F+Y Sbjct: 301 LNENAIAPWEPISSQYYPQLLKSVCNHFGIDMDIPVKEIPQQQMDIILQGSGKEKIKFEY 360 Query: 361 MNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGTRLRREARH 420 ND G PFEGVL N+ RRY+ET S +RE L K+++ + C +C+G RL++EA Sbjct: 361 ENDFGSIRRSEAPFEGVLKNVARRYRETSSDFIRETLEKYMAQKNCPTCKGHRLKKEALA 420 Query: 421 VYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTL 480 V + + ++D SI +++ F L L + +IA ILKEI +RL+FL NVGL+YLTL Sbjct: 421 VLINGKHISNVTDYSIVESIQLFQQLDLTEKEQQIARLILKEIDNRLEFLNNVGLDYLTL 480 Query: 481 SRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNT 540 SR+A TLSGGEAQRIRLA+QIG+ L GV+YVLDEPSIGLHQRDN+RL+ TL +RDL NT Sbjct: 481 SRTAGTLSGGEAQRIRLATQIGSALTGVLYVLDEPSIGLHQRDNDRLIDTLKRMRDLDNT 540 Query: 541 VIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEV 600 +IVVEHDED + AAD ++DIGPGAG HGGE+VA + +M +SLTG+Y+SGK I + Sbjct: 541 LIVVEHDEDTMLAADWLVDIGPGAGEHGGEIVASDTPQNVMKNEQSLTGKYLSGKEFIPL 600 Query: 601 PKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQR 660 P KR N K +++ GA NNLK+V+ +P+GL T +TGVSGSGKSTL+N+ ++ + Sbjct: 601 PTKRRKPNKRK-IEVMGASENNLKNVSAKIPIGLMTVVTGVSGSGKSTLVNEIVYKSLAK 659 Query: 661 QLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPE 720 L + +P ++ I+G+EH DKVIDIDQSPIGRTPRSNPATYTGVF +R++FA E Sbjct: 660 SLYKGKV-KPGKHKKIKGIEHIDKVIDIDQSPIGRTPRSNPATYTGVFDDIRDVFAQTNE 718 Query: 721 SRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKY 780 ++ RGY GRFSFNV+GGRCEAC+GDG++K+EMHFLPD+YVPC+ C G RYNRETLE+KY Sbjct: 719 AKVRGYKKGRFSFNVKGGRCEACRGDGILKIEMHFLPDVYVPCEVCHGARYNRETLEVKY 778 Query: 781 KGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKL 840 KGK I EVL++ IEEA EFF A+P + RKLQT+ DVGL YIRLGQ ATTLSGGEAQRVKL Sbjct: 779 KGKNISEVLELRIEEALEFFSAIPKIKRKLQTVYDVGLGYIRLGQPATTLSGGEAQRVKL 838 Query: 841 ARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADW 900 A EL KR TG++ YILDEPTTGLH DI++LL VL ++ D G+++++IEHNLDVIK+AD Sbjct: 839 ASELHKRSTGKSFYILDEPTTGLHVDDIRRLLSVLQRIADNGDSVLIIEHNLDVIKSADH 898 Query: 901 IVDLGPEGGSGGGEILVSGTPETVAECEA-SHTARFLKPML 940 I+DLGPEGG GG+I+ +GTPE +AE + S+T ++L P+L Sbjct: 899 IIDLGPEGGDRGGQIIATGTPEQIAEQQDVSYTGKYLSPVL 939 >UniRef50_D2RIL7 Excinuclease ABC, A subunit n=3 Tax=Bacteria RepID=D2RIL7_ACIFE Length = 939 Score = 1174 bits (3036), Expect = 0.0, Method: Composition-based stats. Identities = 529/940 (56%), Positives = 682/940 (72%), Gaps = 6/940 (0%) Query: 2 DKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYA 61 D I ++GAR HNLKNI+L IPR+KL+V+TGLSGSGKSSLAFDT+YAEGQRRYVESLSAYA Sbjct: 4 DVIVIQGARQHNLKNISLNIPRNKLVVITGLSGSGKSSLAFDTIYAEGQRRYVESLSAYA 63 Query: 62 RQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCP 121 RQFL M+KPDVD+I GLSPAISI+QK+TS NPRSTVGT+TEI+DYLRLLFAR+G P CP Sbjct: 64 RQFLGQMDKPDVDYIGGLSPAISIDQKTTSRNPRSTVGTVTEIYDYLRLLFARIGIPHCP 123 Query: 122 DHDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARIDG 181 + Q+ Q+ D VL PEG + M+LAP+++ RKGEH LE + GY+R ++D Sbjct: 124 QCGKVIERQSPQQIADKVLELPEGTKFMILAPVVRGRKGEHKNILETVRRAGYVRVKVDD 183 Query: 182 EVCDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVADMDDPK 241 + L + +L+ +KKH+I VVVDR R L RL +S ETAL+L GT + ++ Sbjct: 184 HLYTLDEEIQLDKKKKHSISVVVDRLVARPGLGSRLTDSLETALKLGEGTVAIEEI---G 240 Query: 242 AEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPELS 301 E ++S FAC CG S+ E+EPRLFSFN P GACP C GLG FDPD +I + Sbjct: 241 GETHVYSEKFACAECGISLPEIEPRLFSFNAPYGACPDCMGLGQHMEFDPDLIIPDKTRP 300 Query: 302 LAGGAIRGWDRR-NFYYFQMLKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKENIEFKY 360 GAI Y+ L ++ + ++ W L + +L G E F Y Sbjct: 301 FDQGAIAAVSSNVKSYFLCQLAAVLKSRGYSLQNCWKDLPRKFQQQLLEGIPDEIFTFSY 360 Query: 361 MNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGTRLRREARH 420 N G+ + PFEG++ ++RR KE S + R + F++ C++C G RLR E Sbjct: 361 QNLMGEINEHNTPFEGIIPVLKRRLKEAMSESQRLDYESFMTAIECSTCHGARLRPEVLG 420 Query: 421 VYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTL 480 + V+ + + M + + FFN L+L+ + A IA++ILKEI RL FL NVGL+YLTL Sbjct: 421 ITVDGKNIQQVCRMPVRECLAFFNGLQLSDRDAFIAKQILKEIRARLSFLNNVGLDYLTL 480 Query: 481 SRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNT 540 R+A TLSGGEAQRIRLA+QIG+GLVGV+Y+LDEPSIGLHQRDN++LL TL +LRD+GNT Sbjct: 481 DRAAATLSGGEAQRIRLATQIGSGLVGVLYILDEPSIGLHQRDNDKLLETLKNLRDMGNT 540 Query: 541 VIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEV 600 +IVVEHDED +RAAD +IDIGPGAG +GG VVA+G + I VPES+TGQY+SG++KI V Sbjct: 541 LIVVEHDEDTMRAADQIIDIGPGAGENGGYVVAQGTADEISQVPESITGQYLSGRKKIPV 600 Query: 601 PKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQR 660 P++R N +++ + GAR NNLKD+ +++P+G T +TGVSGSGKSTLIND L+ + Sbjct: 601 PQERRKGNGKQL-TIKGARANNLKDIDVSIPLGTLTVVTGVSGSGKSTLINDILYKALAK 659 Query: 661 QLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPE 720 +L GA P + I G++H DKVI+IDQSPIGRTPRSNPATYTG F +R LF+ + Sbjct: 660 KLMGAR-ERPLAHDRINGIQHIDKVINIDQSPIGRTPRSNPATYTGTFDLIRTLFSTTND 718 Query: 721 SRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKY 780 ++ RGY PGRFSFNV+GGRCEAC GDG++K+EM+FLPD+YVPC+ CKG RYNR+TLE++Y Sbjct: 719 AKLRGYKPGRFSFNVKGGRCEACHGDGMLKIEMNFLPDVYVPCEVCKGTRYNRDTLEVRY 778 Query: 781 KGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKL 840 KGK I EVLDMT+ EA ++F + RKLQ L DVGL YIRLGQ+ATTLSGGEAQRVKL Sbjct: 779 KGKNIAEVLDMTVSEACQYFSNQQRILRKLQVLEDVGLGYIRLGQAATTLSGGEAQRVKL 838 Query: 841 ARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADW 900 A EL+K TG+TLYILDEPTTGLH AD+ +LL+VL +L D G+T+VVIEHNLDVIK+ADW Sbjct: 839 ATELAKVNTGRTLYILDEPTTGLHMADVHKLLEVLQRLVDAGSTVVVIEHNLDVIKSADW 898 Query: 901 IVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLKPML 940 ++DLGPEGG GG ++ +GTPE VA+ S+T +++K +L Sbjct: 899 LIDLGPEGGDRGGTVIATGTPEQVAQVPESYTGQYVKKVL 938 >UniRef50_A5WGZ4 Excinuclease ABC subunit A n=24 Tax=Bacteria RepID=A5WGZ4_PSYWF Length = 992 Score = 1167 bits (3018), Expect = 0.0, Method: Composition-based stats. Identities = 626/985 (63%), Positives = 762/985 (77%), Gaps = 46/985 (4%) Query: 2 DKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYA 61 + I++RGARTHNLKNI++ IPRDK +V+TGLSGSGKSSLAFDTLYAEGQRRYVESLSAYA Sbjct: 4 EHIKIRGARTHNLKNIDIDIPRDKFVVITGLSGSGKSSLAFDTLYAEGQRRYVESLSAYA 63 Query: 62 RQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCP 121 RQFLS M+KP+VD IEGLSPAI+IEQKST+HNPRSTVGTITEI+DYLRLL+ARVG P CP Sbjct: 64 RQFLSQMDKPEVDSIEGLSPAIAIEQKSTNHNPRSTVGTITEIYDYLRLLYARVGTPFCP 123 Query: 122 DHDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARIDG 181 H++P+ AQT+++MVD++++ PE +LM+LAP+I++RKGEH LE L QG++R R+DG Sbjct: 124 VHNLPMVAQTITEMVDDIMALPEDTKLMILAPVIRDRKGEHVVLLEQLVGQGFVRVRVDG 183 Query: 182 EVCDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVADMDD-- 239 V D+ + P LE KKHTIEVVVDRFKVR+DL R+AES ETAL L A++ MD Sbjct: 184 HVYDMDELPALEKNKKHTIEVVVDRFKVREDLGNRVAESLETALRLGSDLAILNYMDGNP 243 Query: 240 ------PKAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDR 293 +++ + SA +CPIC ++ ELEPRLFSFNNP GACP CDGLG +QYF ++ Sbjct: 244 NPDASNQDSDDQILSAKHSCPICDRAVSELEPRLFSFNNPYGACPACDGLGKRQYFSAEK 303 Query: 294 VIQNPELSLAGGAIRGWDRRNFYYFQMLKSLADHYKFDVEAPWGSLSANVHKVVLYGSGK 353 +I NPE SL GA+ GWD+R+ YYF +L ++A HY D++ PW + ++L GSGK Sbjct: 304 LITNPEKSLNQGAVNGWDKRHAYYFGLLNTVAKHYNIDMDIPWQEIDKEHRDIILNGSGK 363 Query: 354 ENIEFKYMNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGTR 413 E IEF + ++RG + + PFEGVL +ERRY +T+S+ VR+ELAK++++ C C+G R Sbjct: 364 EKIEFNFTDERGRKTKKTTPFEGVLPYLERRYAKTQSNFVRDELAKYLADTTCNVCDGAR 423 Query: 414 LRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNV 473 L AR+V V+ + I MSIG A +++ +L+++G + +I+EKI KEI +RL FLV+V Sbjct: 424 LNEIARNVRVDGQGIADIVQMSIGDAADYYKDLQMSGSKGEISEKIFKEINERLNFLVSV 483 Query: 474 GLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIH 533 GL+YL L+RSAETLSGGEAQRIRLASQIGAGL+GVMYVLDEPSIGLHQRDN+RLL TL Sbjct: 484 GLDYLNLARSAETLSGGEAQRIRLASQIGAGLMGVMYVLDEPSIGLHQRDNDRLLQTLTR 543 Query: 534 LRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMS 593 LRDLGNTV+VVEHDEDAIR ADHVIDIG GAGVHGG V+A+G ++ IM V ESLTGQY+S Sbjct: 544 LRDLGNTVLVVEHDEDAIRQADHVIDIGVGAGVHGGHVIAQGTMQEIMDVEESLTGQYLS 603 Query: 594 GKRKIEVPKKRVPANP--------------------------------------EKVLKL 615 GK++I +PK R A ++L Sbjct: 604 GKKEIAIPKVRHKAKTIDLNNPPEKARIMPMGKAKAAAAAKEAKNKKPKAKNIVPMQIEL 663 Query: 616 TGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAEPAPYRD 675 GA GNNL+DV LT+P+G FTC+TGVSGSGKSTLIN TL P+A QLN A+ P Y Sbjct: 664 KGANGNNLQDVDLTIPIGTFTCVTGVSGSGKSTLINRTLMPLAATQLNNASTLIPDKYDS 723 Query: 676 IQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESRARGYTPGRFSFNV 735 I GLE+ DK++DIDQSPIGRTPRSNPATYTGVFTP+R+LF+ E++ARGY GRFSFNV Sbjct: 724 ITGLEYLDKMVDIDQSPIGRTPRSNPATYTGVFTPIRDLFSQTQEAKARGYKAGRFSFNV 783 Query: 736 RGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEE 795 +GGRCE CQGDG+IKVEMHFLPD+YVPCD C GKRYNRETLEI YKGK+I EVLDMT+E+ Sbjct: 784 KGGRCETCQGDGLIKVEMHFLPDMYVPCDICHGKRYNRETLEIHYKGKSIAEVLDMTVED 843 Query: 796 AREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYI 855 A EFF A+P + R+LQ LMDVGL+YIRLGQSA TLSGGEAQRVKLAREL+KR TGQTLYI Sbjct: 844 ATEFFSAIPPIHRRLQALMDVGLSYIRLGQSAPTLSGGEAQRVKLARELAKRDTGQTLYI 903 Query: 856 LDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEI 915 LDEPTTGLHF DI +LL++LH LRD+GNTIVVIEHNLDVIKTADWIVDLGPEGG GG I Sbjct: 904 LDEPTTGLHFHDIYKLLNILHTLRDKGNTIVVIEHNLDVIKTADWIVDLGPEGGKNGGMI 963 Query: 916 LVSGTPETVAECEASHTARFLKPML 940 + GTPE VA + S T +FLKPML Sbjct: 964 IAEGTPEEVANTKESFTGQFLKPML 988 Score = 82.0 bits (201), Expect = 1e-13, Method: Composition-based stats. Identities = 38/116 (32%), Positives = 58/116 (50%), Gaps = 6/116 (5%) Query: 610 EKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAE 669 + +K+ GAR +NLK++ + +P F ITG+SGSGKS+L DTL+ QR+ + A Sbjct: 3 HEHIKIRGARTHNLKNIDIDIPRDKFVVITGLSGSGKSSLAFDTLYAEGQRRYVESLSAY 62 Query: 670 PAPYRDIQGLEHFDKV------IDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVP 719 + D + I I+Q PRS T T ++ +R L+A V Sbjct: 63 ARQFLSQMDKPEVDSIEGLSPAIAIEQKSTNHNPRSTVGTITEIYDYLRLLYARVG 118 >UniRef50_O31151 UvrABC system protein A n=81 Tax=Bacteria RepID=UVRA_ZYMMO Length = 946 Score = 1164 bits (3011), Expect = 0.0, Method: Composition-based stats. Identities = 575/945 (60%), Positives = 731/945 (77%), Gaps = 8/945 (0%) Query: 1 MDKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAY 60 + I +RGAR HNLKN+++ IPR+KL+V+TGLSGSGKSSLAFDT+YAEGQRRYVESLSAY Sbjct: 2 LSTISIRGAREHNLKNVSIDIPRNKLVVMTGLSGSGKSSLAFDTIYAEGQRRYVESLSAY 61 Query: 61 ARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRC 120 ARQFL +M+KPDVDHIEGLSPAISIEQK+TS NPRSTV T+TEI+DY+RLL+ARVG P Sbjct: 62 ARQFLEMMQKPDVDHIEGLSPAISIEQKTTSKNPRSTVATVTEIYDYMRLLWARVGIPYS 121 Query: 121 PDHDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARID 180 P +P+ AQTVSQMVD V++ PEG RL LLAP+++ RKGE+ K + G+ R RID Sbjct: 122 PATGLPITAQTVSQMVDRVMALPEGSRLHLLAPVVRGRKGEYRKEMAEWQKAGFSRLRID 181 Query: 181 GEVCDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVADMDDP 240 GE + + PK++ ++KH IEVVVDR +++ L RLA+S ETAL+L+GG A+ D+ Sbjct: 182 GEYYLIEEAPKIDKKRKHDIEVVVDRLVIKEGLETRLAQSLETALKLAGGIAISEPADEG 241 Query: 241 KAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPEL 300 E +LFS +F+CP+ G+++ E+EPRLFSFN P GACP CDGLG + YFD ++ N L Sbjct: 242 SFEPMLFSEHFSCPVSGFTIPEIEPRLFSFNAPQGACPACDGLGEKPYFDVRLIVPNESL 301 Query: 301 SLAGGAIRGWD---RRNFYYFQMLKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKENIE 357 SLA GA+ W + YY Q+L SLA +Y F +E PW L + V+LYGS E I Sbjct: 302 SLAKGALMPWARSTPPSPYYMQILSSLARYYDFSLETPWKKLPEKIQNVILYGSEGEVIP 361 Query: 358 FKYMNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGTRLRRE 417 ++ ++ FEGV+ N+ERR T+S ++RE++ ++ S PC C G RLR E Sbjct: 362 LRF-SEGNQIYEVEKAFEGVIRNLERRLVTTDSESIREDIGRYQSAAPCEVCHGARLRPE 420 Query: 418 ARHVYVENTPLPAISDMSIGHAMEFFNNL--KLAGQRAKIAEKILKEIGDRLKFLVNVGL 475 A V +++ + ++ M++ A+EFF L KL + +IAE+ILKEI +RL FL NVGL Sbjct: 421 ALAVLIDHHNISDVTKMTVKPALEFFRQLPEKLTEAQNQIAERILKEIIERLGFLDNVGL 480 Query: 476 NYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLR 535 +YL+L RS+ TLSGGE+QRIRLASQIG+GL GV+YVLDEPSIGLHQRDN+RLL TL LR Sbjct: 481 DYLSLDRSSGTLSGGESQRIRLASQIGSGLSGVLYVLDEPSIGLHQRDNDRLLETLKRLR 540 Query: 536 DLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGK 595 DLGN+V+VVEHDEDAIR AD+V+D+GPGAGV GG+V+A G + I+ P+SLTG Y+SG+ Sbjct: 541 DLGNSVLVVEHDEDAIRLADYVVDMGPGAGVMGGKVIAAGSPQDIIDCPDSLTGAYLSGR 600 Query: 596 RKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLF 655 R+I VP KR N +K+ + GA NNL++VT ++P+G FTC+TGVSGSGKS+LI DTL+ Sbjct: 601 REIAVPDKRRKGNGKKL-TIKGATANNLQNVTASIPLGTFTCVTGVSGSGKSSLILDTLY 659 Query: 656 PIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELF 715 A R+LNGA + Y+ I GLEH DKVIDIDQSPIGRTPRSNPATYTG FT +RE F Sbjct: 660 TAAARELNGARLI-SGDYKSISGLEHLDKVIDIDQSPIGRTPRSNPATYTGAFTAIREWF 718 Query: 716 AGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRET 775 A +PE++ARGY GRFSFNV+GGRCEACQGDGV K+EMHFLPD+YV CD C G RYNRET Sbjct: 719 AKLPEAQARGYKAGRFSFNVKGGRCEACQGDGVKKIEMHFLPDVYVTCDVCHGARYNRET 778 Query: 776 LEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEA 835 E+K+KG++I +VL+MT+++A EFF+AVP++ K+ L VGL YI++GQ ATTLSGGEA Sbjct: 779 QEVKFKGQSIADVLNMTVDQAAEFFEAVPSIRDKMAMLARVGLGYIKVGQQATTLSGGEA 838 Query: 836 QRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVI 895 QRVKLA+ELSKR TG+TLYILDEPTTGLHF D+++LL+VL+ L DQGN+IVVIEHNLDVI Sbjct: 839 QRVKLAKELSKRATGRTLYILDEPTTGLHFEDVRKLLEVLNALVDQGNSIVVIEHNLDVI 898 Query: 896 KTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLKPML 940 KTADW++DLGPEGG+GGG+I+ +GTPE VAE E S+T +LK ML Sbjct: 899 KTADWLIDLGPEGGTGGGQIIAAGTPEKVAETEGSYTGHYLKRML 943 >UniRef50_Q56242 UvrABC system protein A n=60 Tax=cellular organisms RepID=UVRA_THET8 Length = 952 Score = 1163 bits (3010), Expect = 0.0, Method: Composition-based stats. Identities = 550/947 (58%), Positives = 703/947 (74%), Gaps = 15/947 (1%) Query: 1 MDKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAY 60 MD+I +RGAR HNLKNI+L +PR K IV+TG+SGSGKS+LAFDT+YAEGQRRYVESLS+Y Sbjct: 1 MDRIVIRGAREHNLKNISLELPRGKFIVITGVSGSGKSTLAFDTIYAEGQRRYVESLSSY 60 Query: 61 ARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRC 120 ARQFL +M+KP+V+ IEGLSPAISI+QK+TSHNPRSTVGT+TEIHDYLRLLFARVG+ C Sbjct: 61 ARQFLGVMDKPEVESIEGLSPAISIDQKTTSHNPRSTVGTVTEIHDYLRLLFARVGQAFC 120 Query: 121 PDHDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARID 180 P+ P+ Q+ S++ D +L +P G R +L+AP+++ RKGE+ K + L +GY R R+D Sbjct: 121 PECGRPIEKQSASEITDRLLKRPPGTRAILMAPLVRGRKGEYRKLFQQLLKEGYARVRVD 180 Query: 181 GEVCDLSDPP--KLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVADMD 238 G + L + LE +KH I++V+DR ++++ R+AE+ E AL G V D Sbjct: 181 GVIYLLEEAQGLSLEKYEKHDIDLVIDRVVLKEEERPRIAEAVELALLRGEGLLRVLYPD 240 Query: 239 DPKAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNP 298 EE LFS FACP G + ELEPR+FSFN+P GACP C GLG +Q FDP+ V+ NP Sbjct: 241 T--GEEELFSEKFACPEHGSVLEELEPRIFSFNSPYGACPACSGLGYRQEFDPELVV-NP 297 Query: 299 ELSLAGGAIRGW----DRRNFYYFQMLKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKE 354 ELSLA GAI W D Y + L++LA+H FD++ P+ L + VLYG E Sbjct: 298 ELSLAEGAILPWSRGRDTGRSYLWDRLRALAEHLGFDLKTPFKDLPEEAKRAVLYGLP-E 356 Query: 355 NIEFKYMNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGTRL 414 E + +T +EGV+ +E+RY+E++S VRE L F+S RPC +C GTR Sbjct: 357 PFEVVFRRGGKETFRVEVRYEGVIPWLEKRYQESDSEGVREALEGFMSLRPCPACGGTRY 416 Query: 415 RREARHVYVENTPLPAISDMSIGHAMEFFNNLK--LAGQRAKIAEKILKEIGDRLKFLVN 472 +RE V V + +S + + A+ FF L+ L +A+IA IL+EI +RL FLV+ Sbjct: 417 KREVLSVKVAGRNIAEVSALPVREALAFFQGLEKTLPPFQAQIARPILREIVERLGFLVD 476 Query: 473 VGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLI 532 VGL+YLTL R+A TLSGGEAQRIRLA+Q+G+GL GV+YVLDEPSIGLH RDN+RL+ TL Sbjct: 477 VGLDYLTLDRAANTLSGGEAQRIRLATQVGSGLTGVLYVLDEPSIGLHPRDNQRLIRTLK 536 Query: 533 HLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYM 592 LRDLGNT+IVVEHDE+ +RAAD ++D+GPGAG+HGGEVVA+G LE I+ P+SLTG Y+ Sbjct: 537 RLRDLGNTLIVVEHDEETMRAADWIVDMGPGAGIHGGEVVAQGTLEDILKSPQSLTGAYL 596 Query: 593 SGKRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLIND 652 G+++I VPK+R N K L L GAR +NLK+VTL +P+G F ITG SGSGKSTL++D Sbjct: 597 RGEKRIPVPKERRKGN-GKWLVLKGARAHNLKNVTLRIPLGRFVAITGPSGSGKSTLVHD 655 Query: 653 TLFPIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVR 712 L+ ++L A P PY ++G+EH DKVI+IDQSPIGRTPRSNPATYTGVF +R Sbjct: 656 VLYAALAQRLMRAKTT-PGPYEALEGVEHLDKVIEIDQSPIGRTPRSNPATYTGVFDEIR 714 Query: 713 ELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYN 772 +LFA PE+R RGY PGRFSFNV+GGRCEAC GDG +K+EM FLPD+YVPC+ CKGKRYN Sbjct: 715 DLFAKTPEARKRGYGPGRFSFNVKGGRCEACGGDGTVKIEMLFLPDLYVPCEVCKGKRYN 774 Query: 773 RETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSG 832 +ETLE+K +GK+I +VLDMT+EEA +FF VP++ARKLQ ++DVGL Y++LGQ + TLSG Sbjct: 775 KETLEVKLRGKSIADVLDMTVEEALDFFQNVPSIARKLQLMVDVGLGYMKLGQPSPTLSG 834 Query: 833 GEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNL 892 GEAQR+KLA EL ++ TG+TLYILDEPTTGLHF D+ +LL VLH+L D GNT+VVIEHNL Sbjct: 835 GEAQRIKLATELGRKATGRTLYILDEPTTGLHFDDVAKLLSVLHRLVDAGNTVVVIEHNL 894 Query: 893 DVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLKPM 939 DV+KTADW++DLGPEGG GGEI+ GTPE VA S T FL + Sbjct: 895 DVVKTADWVIDLGPEGGDRGGEIVAEGTPEEVALT-GSPTGAFLARI 940 >UniRef50_Q71WU0 UvrABC system protein A n=44 Tax=Bacteria RepID=UVRA_LISMF Length = 956 Score = 1161 bits (3004), Expect = 0.0, Method: Composition-based stats. Identities = 549/941 (58%), Positives = 715/941 (75%), Gaps = 7/941 (0%) Query: 2 DKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYA 61 +KI ++GAR HNLKNI++ IPRDKL+V+TGLSGSGKSSLAFDT+YAEGQRRYVESLSAYA Sbjct: 4 EKIVIQGARAHNLKNIDVEIPRDKLVVMTGLSGSGKSSLAFDTIYAEGQRRYVESLSAYA 63 Query: 62 RQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCP 121 RQFL M+KPDVD IEGLSPAISI+QK+TS NPRSTVGT+TEIHDYLRLL+ARVG P CP Sbjct: 64 RQFLGQMDKPDVDLIEGLSPAISIDQKTTSRNPRSTVGTVTEIHDYLRLLYARVGHPVCP 123 Query: 122 DHDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARIDG 181 +H + + +QT+ QMVD VL PE R+ ++API+ +KG H KT+E + +GY+R R+DG Sbjct: 124 NHGIEITSQTIEQMVDRVLEYPEKTRIQIMAPIVSGKKGTHKKTIEEIKKEGYVRIRVDG 183 Query: 182 EVCDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVADMDDPK 241 E+ D++D ++E KKH+IE+++DR +++ + RL +S E AL L+ G AVV M D Sbjct: 184 EIYDINDEIEIEKNKKHSIEIIIDRIVIKEGINTRLYDSIEAALRLADGYAVVDIMGDK- 242 Query: 242 AEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPELS 301 ELLFS ++ACP CG+S+ ELEPR+FSFN+P GACPTCDGLG + D D VI + LS Sbjct: 243 --ELLFSEHYACPYCGFSVGELEPRMFSFNSPFGACPTCDGLGTKLEVDVDTVIPDRSLS 300 Query: 302 LAGGAIRGWDR-RNFYYFQMLKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKENIEFKY 360 L GAI W + YY QML S + D++ P L+ ++L GS + F+Y Sbjct: 301 LNEGAIIPWRPISSQYYPQMLASACKEFGIDMDTPLEKLTKEELDIILNGSKDKEFYFEY 360 Query: 361 MNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGTRLRREARH 420 ND G T PFEG+L N+ERRY+ET S R+++A+++++ PC SC+G RL+ E Sbjct: 361 KNDFGMTRETWIPFEGILPNIERRYRETNSDFTRDQMAQYMTDLPCPSCKGYRLKEETLS 420 Query: 421 VYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTL 480 V V N + IS+ SI A++FF+ L+L+ + +IA I KE+ RL FL NVGL+YLT+ Sbjct: 421 VKVNNHHIGQISEFSINEALDFFDGLELSEKETQIAAPIFKEVRARLGFLKNVGLDYLTM 480 Query: 481 SRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNT 540 SR+A TLSGGEAQRIRLA+QIG+ L GV+Y+LDEPSIGLHQRDN+RL+ TL +RD+GNT Sbjct: 481 SRAAGTLSGGEAQRIRLATQIGSRLTGVLYILDEPSIGLHQRDNDRLISTLQSMRDIGNT 540 Query: 541 VIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEV 600 +IVVEHDED + AAD++IDIGPGAG HGG +VA G E + S+TG Y+SGK+ I V Sbjct: 541 LIVVEHDEDTMMAADYLIDIGPGAGEHGGRIVAAGTPEEVAKNKNSITGDYLSGKKFIPV 600 Query: 601 PKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQR 660 P KR N ++ ++ GA+ NNLK+V +P+ F+C+TGVSGSGKS+L+N+ L R Sbjct: 601 PAKRRKGNGLEL-EIIGAKANNLKNVNAKIPLATFSCVTGVSGSGKSSLVNEVLRKALAR 659 Query: 661 QLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPE 720 +LN A+P +++I+G+E+ +K+I+IDQSPIGRTPRSNPATYTG F +R+LFA E Sbjct: 660 KLN-RNHAKPGEHKEIKGIENLEKIINIDQSPIGRTPRSNPATYTGAFDDIRDLFASTNE 718 Query: 721 SRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKY 780 ++ RGY GRFSFNV+GGRCEAC+GDG+IK+EMHFLPD+YVPC+ C GKRYN ETL+I+Y Sbjct: 719 AKVRGYKKGRFSFNVKGGRCEACKGDGIIKIEMHFLPDVYVPCEVCHGKRYNGETLDIRY 778 Query: 781 KGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKL 840 KGK I EVL+MT+EE E+F P +ARKLQT++DVGL YIRLGQ ATTLSGGEAQRVKL Sbjct: 779 KGKNIAEVLEMTVEEGLEYFTNQPRIARKLQTIVDVGLGYIRLGQPATTLSGGEAQRVKL 838 Query: 841 ARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQ-GNTIVVIEHNLDVIKTAD 899 A EL KR G++ YILDEPTTGLH DI +LL VL +L ++ G+T++VIEHNLDVIK AD Sbjct: 839 ASELHKRSNGKSFYILDEPTTGLHADDIGRLLKVLQRLVEENGDTVLVIEHNLDVIKQAD 898 Query: 900 WIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLKPML 940 +++DLGPEGG GGG+I+ +GTPE +A + S+T ++LKP+L Sbjct: 899 YLIDLGPEGGDGGGQIIATGTPEKIARSKKSYTGKYLKPIL 939 >UniRef50_C7N595 Excinuclease ABC subunit A n=57 Tax=Bacteria RepID=C7N595_SLAHD Length = 960 Score = 1153 bits (2982), Expect = 0.0, Method: Composition-based stats. Identities = 536/956 (56%), Positives = 685/956 (71%), Gaps = 20/956 (2%) Query: 2 DKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYA 61 + I +RGAR HNLKN+++ IPRDKL+V+TGLSGSGKSSLAFDT++AEGQRRYVESLS+YA Sbjct: 6 ENIVIRGAREHNLKNVDVDIPRDKLVVITGLSGSGKSSLAFDTIFAEGQRRYVESLSSYA 65 Query: 62 RQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCP 121 RQFL M+KPD+D I+GLSPA++I+QK+TS NPRSTVGT TEI+DYLRLL+AR+G P CP Sbjct: 66 RQFLGQMDKPDLDRIDGLSPAVAIDQKTTSRNPRSTVGTTTEIYDYLRLLYARIGIPHCP 125 Query: 122 DHDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARIDG 181 + + +T Q+ D VL EGKR+++LAP++ RKGEHTK E+L +G+ R RIDG Sbjct: 126 ECGREIRKRTTDQVADEVLELGEGKRVLILAPVVVGRKGEHTKVFEDLQKEGFSRVRIDG 185 Query: 182 EVCDLS-DPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVADMDDP 240 EV L P KL+ + KHTI+VVVDR ++D R+AES ETA +L+ G VV +D+ Sbjct: 186 EVQRLDGTPIKLDKKFKHTIDVVVDRIVLKDSAIGRIAESIETATKLADGRVVVHVIDEE 245 Query: 241 ----------------KAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLG 284 A + +S ACP G+SM EL+PR FSFN P GACP C GLG Sbjct: 246 DAAADAQKSTPGFSTMSAADHFYSLALACPEHGHSMDELQPRDFSFNAPYGACPDCSGLG 305 Query: 285 VQQYFDPDRVIQNPELSLAGGAIRGWDRRNFYYFQMLKSLADHYKFDVEAPWGSLSANVH 344 ++ DP +I +P LSL+ GAI + YY Q+L ++ H DV+ PW L Sbjct: 306 SREEVDPSLMIPDPSLSLSQGAIAPFV-SGNYYPQVLAAVCKHMGQDVDTPWEDLPKKTQ 364 Query: 345 KVVLYGSGKENIEFKYMNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNR 404 +L+G E + Y G + + G + + +RY++ +S A RE+ K+ + Sbjct: 365 NALLFGLKGEKVRVDYRTVDGRETYWFIDWTGAIDAVMQRYRDAQSDAQREKYGKYFATI 424 Query: 405 PCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIG 464 PCA+C G RL+ E V V + + +MS ++FFN + L+ + A IA I+KEI Sbjct: 425 PCATCGGKRLKPEILAVTVGGKSIDQVCEMSAVECLDFFNGIALSEREAVIATAIVKEIR 484 Query: 465 DRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDN 524 RL+FLV+VGL+YLTL R+ +LSGGEAQRIRLA+QIGAGL+GV+Y+LDEPSIGLHQRDN Sbjct: 485 ARLRFLVDVGLDYLTLERATASLSGGEAQRIRLATQIGAGLMGVLYILDEPSIGLHQRDN 544 Query: 525 ERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVP 584 ERL+ TL LRDLGNTVIVVEHDED IR+AD+VID+GPGAG GG +V+ G E + A Sbjct: 545 ERLIATLERLRDLGNTVIVVEHDEDTIRSADYVIDMGPGAGEKGGYLVSAGTPEEVAACE 604 Query: 585 ESLTGQYMSGKRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGS 644 +S+TG Y+ IEVPKKR +KL GA+ NNLK+VT+ + +G FT +TGVSGS Sbjct: 605 KSITGAYLRRDSVIEVPKKRRNPKRGS-IKLAGAKENNLKNVTIDIEIGTFTVVTGVSGS 663 Query: 645 GKSTLINDTLFPIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATY 704 GKS+LI DTL P +LN A YR + G E DK+IDIDQSPIGRTPRSNPATY Sbjct: 664 GKSSLITDTLAPALANRLNHAH-KRTGAYRKLSGYEELDKIIDIDQSPIGRTPRSNPATY 722 Query: 705 TGVFTPVRELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCD 764 G++ +R LFA PE++ARGY PGRFSFNV GGRCEAC+GDG +K+EMHFLPD+YVPC+ Sbjct: 723 IGLWDDIRALFASTPEAKARGYAPGRFSFNVSGGRCEACKGDGQLKIEMHFLPDVYVPCE 782 Query: 765 QCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLG 824 C GKRYNRETL++ Y+GK +++VLDMT++EA EFF +P L+RKLQTL DVGL YIRLG Sbjct: 783 VCGGKRYNRETLQVTYRGKNVYDVLDMTVDEALEFFKNIPGLSRKLQTLHDVGLGYIRLG 842 Query: 825 QSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNT 884 Q ATTLSGGEAQRVKLA EL +R +G+T+Y+LDEPTTGLH D++QLL+VL +L D GNT Sbjct: 843 QPATTLSGGEAQRVKLASELQRRQSGKTIYVLDEPTTGLHMEDVKQLLEVLQRLVDCGNT 902 Query: 885 IVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLKPML 940 ++VIEHNLDVIK+AD ++DLGPEGG GG ++ GTPE VA E SHT RFL+ +L Sbjct: 903 MLVIEHNLDVIKSADRVIDLGPEGGDRGGTVVAKGTPEKVANNENSHTGRFLRSVL 958 >UniRef50_O26543 UvrABC system protein A n=86 Tax=cellular organisms RepID=UVRA_METTH Length = 962 Score = 1146 bits (2965), Expect = 0.0, Method: Composition-based stats. Identities = 557/944 (59%), Positives = 712/944 (75%), Gaps = 12/944 (1%) Query: 3 KIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYAR 62 KI ++GAR HNL+N++L +PRDK IV+TG+SGSGKSSLAFDT+YAEGQRRYVESLSAYAR Sbjct: 10 KIVIKGAREHNLQNVDLELPRDKFIVITGISGSGKSSLAFDTIYAEGQRRYVESLSAYAR 69 Query: 63 QFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCPD 122 QFL M+KP++D+IEGLSPAISI+QK+T NPRSTVGTITEI+DYLRLLFAR+G+P C Sbjct: 70 QFLGQMKKPEMDYIEGLSPAISIDQKTTRVNPRSTVGTITEIYDYLRLLFARIGKPHCYL 129 Query: 123 HDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARIDGE 182 + QT +Q+VD ++ EG+R+++LAP++++RKGEH + E L QG++R R+DGE Sbjct: 130 CGREIEQQTSTQIVDRIMDDGEGERIIILAPVVRDRKGEHQRVFERLREQGFVRVRVDGE 189 Query: 183 VCDLSDPPKLELQKKHTIEVVVDRFKVR--DDLTQRLAESFETALELSGGTAVVADMDDP 240 + DL D L+ +KH+I+VVVDR VR + +RLA+S ETAL+L GT V P Sbjct: 190 IHDLEDEFDLDRNRKHSIDVVVDRLVVRRDTEFRKRLADSVETALQLGEGTVRVPSTMTP 249 Query: 241 KAEELLFSANFACP-ICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPE 299 EE ++S +FACP G + E+ PR+FSFN+P GACP C+GLG + DPD V+ PE Sbjct: 250 -GEERIYSEHFACPGTAGINFEEISPRMFSFNSPHGACPECNGLGSKLEIDPDLVVPYPE 308 Query: 300 LSLAGGAIRGWDRRN---FYYFQMLKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKENI 356 S+ GAI W + YY QML+++A+HY F ++ P+ L + +LYG+ E I Sbjct: 309 RSINEGAIVPWSKSGKRDNYYHQMLRAVAEHYGFSLDTPFRDLDEEHRRAILYGT-DEKI 367 Query: 357 EFKYMNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGTRLRR 416 +F + + T FEGV+ MER Y ET+S+ +R + +F+SN C C G+RLR Sbjct: 368 QFVFQR-KNRTYRVNRRFEGVIPRMERIYMETKSNYMRTYIGRFMSNHACPVCGGSRLRP 426 Query: 417 EARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNVGLN 476 E+ V + + + +MSI A EFF++LKL + IA ++LKEI +RL+FL++VGL+ Sbjct: 427 ESLSVTINGRSIHDVVEMSIREAHEFFDSLKLTEREEYIAREVLKEIRERLRFLIDVGLD 486 Query: 477 YLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRD 536 YLTLSRS+ TLSGGEAQRIRLA+QIG+GLVGV+Y+LDEPSIGLHQRDN RL+ TL LRD Sbjct: 487 YLTLSRSSGTLSGGEAQRIRLATQIGSGLVGVLYILDEPSIGLHQRDNRRLIETLKRLRD 546 Query: 537 LGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKR 596 LGNT+IVVEHDE+ I +ADHV+DIGPGAG HGG VVAEG E IM P+SLTG Y+SG+ Sbjct: 547 LGNTLIVVEHDEETILSADHVVDIGPGAGEHGGCVVAEGTPEEIMEDPDSLTGAYLSGRE 606 Query: 597 KIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFP 656 I +P+ R + + L + GA NNL+++ + +P+GLFTC+TGVSGSGKSTL+ND L+ Sbjct: 607 TIPLPEVRRRPS-GRYLTVRGAAENNLREIDVRIPLGLFTCVTGVSGSGKSTLVNDILYR 665 Query: 657 IAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFA 716 +LN + + DI+GL+H DKV+ IDQSPIGRTPRSNPATYTGVFT +RELFA Sbjct: 666 GVYERLNHKHM-NAGRHTDIEGLQHIDKVVMIDQSPIGRTPRSNPATYTGVFTHIRELFA 724 Query: 717 GVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETL 776 PE+R RGY PGRFSFNV+GGRCEAC GDG+IK+EMHFL D+YVPC+ C+G+RYN ETL Sbjct: 725 QTPEARKRGYRPGRFSFNVKGGRCEACGGDGIIKIEMHFLADVYVPCEVCRGRRYNEETL 784 Query: 777 EIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQ 836 EI+Y+G+ I EVLDMT+EEA EFF+ +P + RKLQTL DVGL YI+LGQ ATTLSGGEAQ Sbjct: 785 EIRYRGRNIAEVLDMTVEEALEFFENIPQVRRKLQTLYDVGLGYIKLGQPATTLSGGEAQ 844 Query: 837 RVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIK 896 RVKLA+ELS+R TG TLYILDEPTTGLHF DI++LL+VL +L D GNT VVIEHNLDVIK Sbjct: 845 RVKLAKELSRRSTGSTLYILDEPTTGLHFDDIKKLLNVLGRLVDAGNTAVVIEHNLDVIK 904 Query: 897 TADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLKPML 940 +AD I+DLGPEGG GG ++ GTPE VA +HT RFL+ +L Sbjct: 905 SADHIIDLGPEGGERGGLVVAEGTPEEVAAS-GTHTGRFLREVL 947 >UniRef50_Q2YPX5 UvrABC system protein A n=164 Tax=root RepID=UVRA_BRUA2 Length = 974 Score = 1141 bits (2952), Expect = 0.0, Method: Composition-based stats. Identities = 576/960 (60%), Positives = 728/960 (75%), Gaps = 23/960 (2%) Query: 2 DKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYA 61 I +RGAR HNLKN++L +PRDKLIV+TGLSGSGKSSLAFDT+YAEGQRRYVESLSAYA Sbjct: 5 KFISIRGAREHNLKNVDLDLPRDKLIVMTGLSGSGKSSLAFDTIYAEGQRRYVESLSAYA 64 Query: 62 RQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCP 121 RQFL +M+KPDVD I+GLSPAISIEQK+TS NPRSTVGT+TEI+DY+RLLFARVG P P Sbjct: 65 RQFLEMMQKPDVDQIDGLSPAISIEQKTTSRNPRSTVGTVTEIYDYMRLLFARVGIPYSP 124 Query: 122 DHDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARIDG 181 +P+ +QTVSQMVD V++ EG RL +LAPI++ RKGE+ K L L +G+ R ++DG Sbjct: 125 ATGLPIESQTVSQMVDRVIALEEGTRLYILAPIVRGRKGEYRKELAELQKKGFQRVKVDG 184 Query: 182 EVCDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVADMDDP- 240 +++D P L+ + KH I+VVVDR VR DL+ RLA+S ET L+L+ G A+ D P Sbjct: 185 TFYEIADVPPLDKKYKHDIDVVVDRVVVRPDLSTRLADSLETCLKLADGLAIAEFADKPL 244 Query: 241 -----------------KAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGL 283 E +LFS FACP+ G+++ E+EPRLFSFNNP GACPTCDGL Sbjct: 245 PVGETAEGGSANKSANETHERILFSEKFACPVSGFTIPEIEPRLFSFNNPFGACPTCDGL 304 Query: 284 GVQQYFDPDRVIQNPELSLAGGAIRGWDRRNF-YYFQMLKSLADHYKFDVEAPWGSLSAN 342 G QQ DP+ +I + +L GA+ W R + YY Q L++L Y F V A W LS Sbjct: 305 GTQQAIDPNLIIPDESAALKDGAVAPWARSSSPYYNQTLEALGKAYGFKVSARWSELSEE 364 Query: 343 VHKVVLYGSGKENIEFKYMNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFIS 402 + +LYG+ I F Y +D + PFEGV+ N+ERR+KET+S+ REE+ +F++ Sbjct: 365 ARQAILYGTKGREITFHY-DDGLRSYQTTKPFEGVIPNLERRWKETDSAWSREEIERFMA 423 Query: 403 NRPCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLK--LAGQRAKIAEKIL 460 + PC +C G RL+ EA V + + I++MSI A +F ++ ++ +IA +IL Sbjct: 424 STPCPACNGYRLKPEALSVKIGKKHIGEITEMSIRKADAWFRDIDGSFNEKQREIAARIL 483 Query: 461 KEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLH 520 K I +RL+FL NVGL+YLTL+R++ TLSGGE+QRIRLASQIG+GL GV+YVLDEPSIGLH Sbjct: 484 KAIRERLQFLNNVGLDYLTLARNSGTLSGGESQRIRLASQIGSGLTGVLYVLDEPSIGLH 543 Query: 521 QRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAI 580 QRDN RLL TL HLRDLGNTVIVVEHDEDAI AD+V+DIGP AGVHGG+V+A+G + I Sbjct: 544 QRDNARLLDTLRHLRDLGNTVIVVEHDEDAILTADYVVDIGPAAGVHGGKVIAQGSPQDI 603 Query: 581 MAVPESLTGQYMSGKRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITG 640 MA SLTG+Y+SG ++ VP +R + K L++ GARGNNLK+V+ +P+G FT +TG Sbjct: 604 MANTNSLTGKYLSGAMEVAVPAERRKISKTKRLRVVGARGNNLKNVSADIPLGTFTAVTG 663 Query: 641 VSGSGKSTLINDTLFPIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSN 700 VSG GKST + +TLF A R++ G+ PA + I+GLE DKVIDIDQSPIGRTPRSN Sbjct: 664 VSGGGKSTFLIETLFKAASRRIMGSR-EHPAEHDRIEGLEFLDKVIDIDQSPIGRTPRSN 722 Query: 701 PATYTGVFTPVRELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIY 760 PATYTG FTP+R+ FAG+PE++ARGY PGRFSFNV+GGRCEACQGDGVIK+EMHFLPD+Y Sbjct: 723 PATYTGAFTPIRDWFAGLPEAKARGYQPGRFSFNVKGGRCEACQGDGVIKIEMHFLPDVY 782 Query: 761 VPCDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTY 820 V CD C GKRYNRETL++ +KGK+I +VLDMT+EE EFF AVPA+ KL+TL+ VGL Y Sbjct: 783 VTCDVCHGKRYNRETLDVLFKGKSIADVLDMTVEEGAEFFSAVPAVRDKLETLVKVGLGY 842 Query: 821 IRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRD 880 I++GQ ATTLSGGEAQRVKLA+ELS+R TG+TLYILDEPTTGLHF D+ +LL+VLH+L + Sbjct: 843 IKVGQQATTLSGGEAQRVKLAKELSRRATGRTLYILDEPTTGLHFHDVAKLLEVLHELVE 902 Query: 881 QGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLKPML 940 QGNT+VVIEHNL+VIKTADW++DLGPEGG GGGEI+ G PE + + + S+T +FLK +L Sbjct: 903 QGNTVVVIEHNLEVIKTADWVIDLGPEGGDGGGEIVAVGRPEDIVQEKRSYTGQFLKELL 962 Score = 173 bits (439), Expect = 2e-41, Method: Composition-based stats. Identities = 78/203 (38%), Positives = 111/203 (54%), Gaps = 17/203 (8%) Query: 403 NRPCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKE 462 C C G R RE V + + + DM++ EFF+ + Sbjct: 782 YVTCDVCHGKRYNRETLDVLFKGKSIADVLDMTVEEGAEFFSAVP--------------A 827 Query: 463 IGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGV-MYVLDEPSIGLHQ 521 + D+L+ LV VGL Y+ + + A TLSGGEAQR++LA ++ G +Y+LDEP+ GLH Sbjct: 828 VRDKLETLVKVGLGYIKVGQQATTLSGGEAQRVKLAKELSRRATGRTLYILDEPTTGLHF 887 Query: 522 RDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIM 581 D +LL L L + GNTV+V+EH+ + I+ AD VID+GP G GGE+VA G E I+ Sbjct: 888 HDVAKLLEVLHELVEQGNTVVVIEHNLEVIKTADWVIDLGPEGGDGGGEIVAVGRPEDIV 947 Query: 582 AVPESLTGQYMSGKRKIEVPKKR 604 S TGQ++ K +E KR Sbjct: 948 QEKRSYTGQFL--KELLERRPKR 968 Score = 86.6 bits (213), Expect = 4e-15, Method: Composition-based stats. Identities = 49/185 (26%), Positives = 85/185 (45%), Gaps = 20/185 (10%) Query: 608 NPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATI 667 + +K + + GAR +NLK+V L LP +TG+SGSGKS+L DT++ QR+ + Sbjct: 2 SDQKFISIRGAREHNLKNVDLDLPRDKLIVMTGLSGSGKSSLAFDTIYAEGQRRYVESLS 61 Query: 668 AEPAPYRDIQGLEHFDKV------IDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPES 721 A + ++ D++ I I+Q R PRS T T ++ +R LFA V Sbjct: 62 AYARQFLEMMQKPDVDQIDGLSPAISIEQKTTSRNPRSTVGTVTEIYDYMRLLFARVGIP 121 Query: 722 RARGYTPGRFSFNVRGGRCEACQGDGVIK--VEMHFLPDIYVPCDQCKGKR--YNRETLE 777 + G E+ ++ + + +Y+ +G++ Y +E E Sbjct: 122 YSP----------ATGLPIESQTVSQMVDRVIALEEGTRLYILAPIVRGRKGEYRKELAE 171 Query: 778 IKYKG 782 ++ KG Sbjct: 172 LQKKG 176 >UniRef50_A8ID62 Excinuclease ABC A subunit n=66 Tax=Bacteria RepID=A8ID62_AZOC5 Length = 1084 Score = 1139 bits (2946), Expect = 0.0, Method: Composition-based stats. Identities = 581/944 (61%), Positives = 731/944 (77%), Gaps = 10/944 (1%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 63 + VRGAR HNLKN++L IPRD L+V TGLSGSGKSSLAFDT+YAEGQRRYVESLSAYARQ Sbjct: 128 LSVRGAREHNLKNVDLDIPRDSLVVFTGLSGSGKSSLAFDTIYAEGQRRYVESLSAYARQ 187 Query: 64 FLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCPDH 123 FL +M+KPDVD I+GLSPAISIEQK+TS NPRSTVGT+TEI+DY+RLL+AR G P P Sbjct: 188 FLEMMQKPDVDQIDGLSPAISIEQKTTSKNPRSTVGTVTEIYDYMRLLWARAGVPYSPAT 247 Query: 124 DVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARIDGEV 183 +P+ +QTVSQMVD L PEG RL +LAP+++ RKGE+ K + +G+ R ++DG Sbjct: 248 GLPIESQTVSQMVDRTLDLPEGSRLYILAPVVRGRKGEYRKEMAEFLKKGFQRVKVDGAF 307 Query: 184 CDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVADMD----D 239 ++++ P L+ + KH I+VVVDR VR D+ RLA+SFETAL L+ G AV+ D D Sbjct: 308 HEIAEAPALDKKLKHDIDVVVDRVVVRADIAARLADSFETALGLADGIAVLEFADQKEAD 367 Query: 240 PKAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPE 299 + ++FS FACP+ G+++ E+EPRLFSFNNP GACP CDGLGV+Q DPD V+ + Sbjct: 368 GSPKRVIFSEKFACPVSGFTIPEIEPRLFSFNNPFGACPACDGLGVEQTIDPDLVVPDKS 427 Query: 300 LSLAGGAIRGWDRRNF-YYFQMLKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKENIEF 358 +L GAI W + YY Q L +LA HYKF + P+ L V+L+GSG+E I F Sbjct: 428 RTLKQGAIAPWAKSTSPYYGQTLDALAKHYKFKLTVPFAELPKKAQDVILFGSGEEEIAF 487 Query: 359 KYMNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGTRLRREA 418 Y +D + FEG++ N++RR++ETES REE++K+ S PCA+C G RL+ EA Sbjct: 488 SY-DDGLRAYETKKTFEGIVRNLDRRWRETESDWAREEISKYFSTVPCATCAGYRLKPEA 546 Query: 419 RHVYVENTPLPAISDMSIGHAMEFFNNLK--LAGQRAKIAEKILKEIGDRLKFLVNVGLN 476 V + + + +MS+ A +F +L L+ ++ +IA +ILKEI +RL+FL++VGL Sbjct: 547 LAVKIAGNHIGQVGEMSVRSASAWFEDLPGTLSDKQNEIAARILKEIRERLRFLMDVGLE 606 Query: 477 YLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRD 536 YLTL RS+ TLSGGE+QRIRLASQIG+GL GV+YVLDEPSIGLHQRDN RLL TL LRD Sbjct: 607 YLTLGRSSGTLSGGESQRIRLASQIGSGLSGVLYVLDEPSIGLHQRDNARLLETLKRLRD 666 Query: 537 LGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKR 596 LGNTVIVVEHDEDAI AAD+V+D+GPGAG+HGG +VA+G + I+A P S+TG+Y++G+ Sbjct: 667 LGNTVIVVEHDEDAILAADYVVDVGPGAGIHGGRIVAQGTPQEILADPASITGKYLTGEL 726 Query: 597 KIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFP 656 + P R NP K LKL+GARGNNLK+VT +P+GLFT ITGVSG GKSTL+ DTL+ Sbjct: 727 SVP-PAPRRKPNPRKTLKLSGARGNNLKNVTAEIPLGLFTSITGVSGGGKSTLLIDTLYK 785 Query: 657 IAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFA 716 R+LN A A PAP+ ++GLEH DKVIDIDQSPIGRTPRSNPATYTG FTP+RE F+ Sbjct: 786 AVARRLNNAHDA-PAPFDKLEGLEHLDKVIDIDQSPIGRTPRSNPATYTGAFTPIREWFS 844 Query: 717 GVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETL 776 G+PE++ARGY PGRFSFNV+GGRCEACQGDGVIK+EMHFLPD+YV CD CKGKRYNRETL Sbjct: 845 GLPEAKARGYGPGRFSFNVKGGRCEACQGDGVIKIEMHFLPDVYVTCDVCKGKRYNRETL 904 Query: 777 EIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQ 836 E+ ++ K+I +VLDMT++E EFF AVP++ KL+TL VGL YI++GQ ATTLSGGEAQ Sbjct: 905 EVTFREKSIADVLDMTVDEGAEFFKAVPSVRDKLETLAQVGLGYIKVGQQATTLSGGEAQ 964 Query: 837 RVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIK 896 RVKLA+ELSKR TG+TLYILDEPTTGLHF D+ +LL+VLH+L +QGNT+VVIEHNL+VIK Sbjct: 965 RVKLAKELSKRATGRTLYILDEPTTGLHFHDVAKLLEVLHELVEQGNTVVVIEHNLEVIK 1024 Query: 897 TADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLKPML 940 T+DW++DLGPEGG GGGEILV+G P+ VA+ + SHT FL +L Sbjct: 1025 TSDWVIDLGPEGGDGGGEILVAGPPDVVAKEKRSHTGTFLAEVL 1068 Score = 100 bits (250), Expect = 2e-19, Method: Composition-based stats. Identities = 38/123 (30%), Positives = 56/123 (45%), Gaps = 7/123 (5%) Query: 2 DKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYA 61 +++ GAR +NLKN+ IP +TG+SG GKS+L DTLY RR + A A Sbjct: 740 KTLKLSGARGNNLKNVTAEIPLGLFTSITGVSGGGKSTLLIDTLYKAVARRLNNAHDAPA 799 Query: 62 RQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCP 121 ++ +E L I I+Q PRS T T +R F+ + E + Sbjct: 800 -------PFDKLEGLEHLDKVIDIDQSPIGRTPRSNPATYTGAFTPIREWFSGLPEAKAR 852 Query: 122 DHD 124 + Sbjct: 853 GYG 855 Score = 92.0 bits (227), Expect = 1e-16, Method: Composition-based stats. Identities = 57/249 (22%), Positives = 100/249 (40%), Gaps = 28/249 (11%) Query: 545 EHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEVPK-K 603 EH D V+ + P V+ GP P S + + MS ++ Sbjct: 66 EHPRSVSCRTDAVLKLPPATAGRDPSVLC-GPP------PASPSSRLMSDRKPSSRAVTA 118 Query: 604 RVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLN 663 ++L + GAR +NLK+V L +P TG+SGSGKS+L DT++ QR+ Sbjct: 119 PKDRRDARLLSVRGAREHNLKNVDLDIPRDSLVVFTGLSGSGKSSLAFDTIYAEGQRRYV 178 Query: 664 GATIAEPAPYRDIQGLEHFDKV------IDIDQSPIGRTPRSNPATYTGVFTPVRELFAG 717 + A + ++ D++ I I+Q + PRS T T ++ +R L+A Sbjct: 179 ESLSAYARQFLEMMQKPDVDQIDGLSPAISIEQKTTSKNPRSTVGTVTEIYDYMRLLWAR 238 Query: 718 VPESRARGYTPGRFSFNVRGGRCEACQGDGVIK--VEMHFLPDIYVPCDQCKGKR--YNR 773 + G E+ ++ +++ +Y+ +G++ Y + Sbjct: 239 AGVPYSP----------ATGLPIESQTVSQMVDRTLDLPEGSRLYILAPVVRGRKGEYRK 288 Query: 774 ETLEIKYKG 782 E E KG Sbjct: 289 EMAEFLKKG 297 >UniRef50_P63385 UvrABC system protein A n=172 Tax=cellular organisms RepID=UVRA_STRR6 Length = 943 Score = 1137 bits (2942), Expect = 0.0, Method: Composition-based stats. Identities = 540/943 (57%), Positives = 688/943 (72%), Gaps = 9/943 (0%) Query: 2 DKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYA 61 DKI + GAR HNLKNI++ IPRDKL+VVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYA Sbjct: 3 DKIVIHGARAHNLKNIDVEIPRDKLVVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYA 62 Query: 62 RQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCP 121 RQFL MEKPDVD I+GLSPAISI+QK+TS NPRSTVGT TEI+DYLRLL+ARVG P C Sbjct: 63 RQFLGNMEKPDVDAIDGLSPAISIDQKTTSKNPRSTVGTTTEINDYLRLLYARVGTPYCI 122 Query: 122 DHDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARIDG 181 + + A +V Q+VD VL PE +RL +LAP+I+++KG+H +E + GY+R R+DG Sbjct: 123 NGHGAINASSVEQIVDKVLELPERQRLQILAPVIRKKKGQHKSVIEKVQKDGYVRVRVDG 182 Query: 182 EVCDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVADMDDPK 241 EV D+++ P+L K+H I+VVVDR +++ + RL +S E AL ++ G ++ MDD Sbjct: 183 EVYDVTEVPELSKSKQHNIDVVVDRIVIKEGIRSRLFDSIEAALRIAEGYVIIDTMDD-- 240 Query: 242 AEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPELS 301 ELLFS ++ACP+CG+++ ELEPRLFSFN P G+C CDGLG++ D D V+ + + Sbjct: 241 -SELLFSEHYACPVCGFTVPELEPRLFSFNAPFGSCSECDGLGIKLEVDTDLVVPDASKT 299 Query: 302 LAGGAIRGWDR-RNFYYFQMLKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKENIEFKY 360 L GA+ W+ + YY ML+ + ++ P+ LS ++LYGS + F Y Sbjct: 300 LREGALAPWNPISSNYYPNMLEQAMKVFGVAMDKPFEDLSEEDKNLILYGSDGKEFHFHY 359 Query: 361 MNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGTRLRREARH 420 N+ G PFEGV++N++RRY ET S R ++ +++ C +C+G RL +A Sbjct: 360 ENEFGGVRDIDIPFEGVINNIKRRYHETNSDYTRTQMRLYMNELTCGTCQGYRLNDQALS 419 Query: 421 VYVENT---PLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNVGLNY 477 V V + ISD+SI ++ + L L+ A IA ILKEI DRL FL NVGLNY Sbjct: 420 VRVGGQQGPHIGEISDLSIADHLDLVSQLTLSENEAIIARPILKEIKDRLTFLNNVGLNY 479 Query: 478 LTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDL 537 LTLSRSA TLSGGE+QRIRLA+QIG+ L GV+Y+LDEPSIGLHQRDN+RL+ +L +RDL Sbjct: 480 LTLSRSAGTLSGGESQRIRLATQIGSNLSGVLYILDEPSIGLHQRDNDRLIASLKKMRDL 539 Query: 538 GNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRK 597 GNT+IVVEHDED +R AD++ID+GPGAGV GGE+VA G + + +S+TGQY+SGKR Sbjct: 540 GNTLIVVEHDEDTMREADYLIDVGPGAGVFGGEIVAAGTPKQVARNSKSITGQYLSGKRV 599 Query: 598 IEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPI 657 I VP++R N + +++ GAR NNL++VT P+G F +TGVSGSGKSTLIN L Sbjct: 600 IPVPEERRVGN-GRFIEVIGARENNLQNVTARFPLGKFIAVTGVSGSGKSTLINSILKKA 658 Query: 658 AQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAG 717 ++LN +P ++ I G+EH D++IDIDQSPIGRTPRSNPATYTGVF +R+LFA Sbjct: 659 IAQKLN-RNSDKPGKFKTITGIEHVDRLIDIDQSPIGRTPRSNPATYTGVFDDIRDLFAQ 717 Query: 718 VPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLE 777 E++ RGY GRFSFNV+GGRCEAC GDG+IK+EMHFLPD+YV C+ C G RYN ETLE Sbjct: 718 TNEAKIRGYKKGRFSFNVKGGRCEACSGDGIIKIEMHFLPDVYVACEVCHGTRYNSETLE 777 Query: 778 IKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQR 837 + YK K I +VLDMT+ +A EFF +P + RKLQT+ DVGL Y+ LGQ ATTLSGGEAQR Sbjct: 778 VHYKEKNISQVLDMTVNDAVEFFQHIPKIQRKLQTIKDVGLGYVTLGQPATTLSGGEAQR 837 Query: 838 VKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKT 897 +KLA EL KR TG++ YILDEPTTGLH DI +LL VL + D GNT++VIEHNLDVIKT Sbjct: 838 MKLASELHKRSTGKSFYILDEPTTGLHTEDIARLLKVLARFVDDGNTVLVIEHNLDVIKT 897 Query: 898 ADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLKPML 940 AD I+DLGPEGG GGG I+V+GTPE VA EAS+T +LK L Sbjct: 898 ADHIIDLGPEGGVGGGTIIVTGTPEEVAANEASYTGHYLKGKL 940 Score = 160 bits (406), Expect = 2e-37, Method: Composition-based stats. Identities = 85/275 (30%), Positives = 127/275 (46%), Gaps = 42/275 (15%) Query: 353 KENIEFKYMNDRGDTSIRRHPFEGVLHNMERRYKETESSAVR------------------ 394 I+ + GV ++ + +T + +R Sbjct: 683 DRLIDIDQSPIGRTPRSNPATYTGVFDDIRDLFAQTNEAKIRGYKKGRFSFNVKGGRCEA 742 Query: 395 -------EELAKFI--SNRPCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNN 445 + F+ C C GTR E V+ + + + DM++ A+EFF + Sbjct: 743 CSGDGIIKIEMHFLPDVYVACEVCHGTRYNSETLEVHYKEKNISQVLDMTVNDAVEFFQH 802 Query: 446 LKLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGL 505 + +I +L+ + +VGL Y+TL + A TLSGGEAQR++LAS++ Sbjct: 803 IP--------------KIQRKLQTIKDVGLGYVTLGQPATTLSGGEAQRMKLASELHKRS 848 Query: 506 VGV-MYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGA 564 G Y+LDEP+ GLH D RLL L D GNTV+V+EH+ D I+ ADH+ID+GP Sbjct: 849 TGKSFYILDEPTTGLHTEDIARLLKVLARFVDDGNTVLVIEHNLDVIKTADHIIDLGPEG 908 Query: 565 GVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIE 599 GV GG ++ G E + A S TG Y+ GK E Sbjct: 909 GVGGGTIIVTGTPEEVAANEASYTGHYLKGKLHHE 943 >UniRef50_Q8UF86 UvrABC system protein A n=78 Tax=cellular organisms RepID=UVRA_AGRT5 Length = 973 Score = 1137 bits (2941), Expect = 0.0, Method: Composition-based stats. Identities = 564/961 (58%), Positives = 726/961 (75%), Gaps = 24/961 (2%) Query: 1 MDKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAY 60 + I +RGAR HNLK I+L +PR+KLIV+TGLSGSGKSSLAFDT+YAEGQRRYVESLSAY Sbjct: 4 LKTISIRGAREHNLKGIDLDLPRNKLIVMTGLSGSGKSSLAFDTIYAEGQRRYVESLSAY 63 Query: 61 ARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRC 120 ARQFL +M+KPDVD I+GLSPAISIEQK+TS NPRSTVGT+TEI+DY+RLLFARVG P Sbjct: 64 ARQFLEMMQKPDVDQIDGLSPAISIEQKTTSRNPRSTVGTVTEIYDYMRLLFARVGVPYS 123 Query: 121 PDHDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARID 180 P +P+ +QTVSQMVD +L+ EG RL +LAPI++ RKGE+ K L L +G+ R ++D Sbjct: 124 PATGLPIESQTVSQMVDRILAFEEGTRLYILAPIVRGRKGEYKKELAELMKKGFQRVKVD 183 Query: 181 GEVCDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVADMDDP 240 G+ +++D P L+ + KH I+VVVDR VR D+ RLA+S ET L+L+ G A+ D P Sbjct: 184 GQFYEIADVPALDKKYKHDIDVVVDRAVVRPDMAARLADSLETCLKLADGLAIAEFADKP 243 Query: 241 ------------------KAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDG 282 E +LFS FACP+ G+++ E+EPRLFSFNNP GACP+CDG Sbjct: 244 LPPEDTAAGGSANKSLNETHERVLFSEKFACPVSGFTIPEIEPRLFSFNNPFGACPSCDG 303 Query: 283 LGVQQYFDPDRVIQNPELSLAGGAIRGWDRRNF-YYFQMLKSLADHYKFDVEAPWGSLSA 341 LG QQ D + ++ P +L GAI W + + YY Q L++L + F + + W LS Sbjct: 304 LGSQQKVDENLIVPEPARTLRDGAIAPWAKSSSPYYNQTLEALGKAFGFKLSSKWTDLSK 363 Query: 342 NVHKVVLYGSGKENIEFKYMNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFI 401 +L G+ + IEF Y + ++ FEG++ N+ERR+KET+S+ REE+ +++ Sbjct: 364 EAQHAILQGTDDK-IEFNYQDGARSYKTVKN-FEGIVPNLERRWKETDSAWAREEIERYM 421 Query: 402 SNRPCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNL--KLAGQRAKIAEKI 459 S PC +C G RL+ EA V + + ++ MSI A ++F L L ++ +IA +I Sbjct: 422 SAAPCPACAGYRLKPEALAVKINKLHIGEVTQMSIRKARDWFEVLPENLNAKQNEIAVRI 481 Query: 460 LKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGL 519 LKEI +RL+FL +VGL+YL+LSR++ TLSGGE+QRIRLASQIG+GL GV+YVLDEPSIGL Sbjct: 482 LKEIRERLRFLNDVGLDYLSLSRNSGTLSGGESQRIRLASQIGSGLTGVLYVLDEPSIGL 541 Query: 520 HQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEA 579 HQRDN RLL TL HLRD+GNTVIVVEHDEDAI AD+V+DIGP AG+HGG+V+AEG + Sbjct: 542 HQRDNARLLETLKHLRDIGNTVIVVEHDEDAILTADYVVDIGPAAGIHGGQVIAEGTPQD 601 Query: 580 IMAVPESLTGQYMSGKRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCIT 639 +MA P+SLTG+Y+SG+ + VP +R + +K+ GARGNNL++VT +P+G+FT +T Sbjct: 602 VMANPKSLTGKYLSGELGVAVPAERRKPKKGREIKVFGARGNNLQNVTAAVPLGVFTAVT 661 Query: 640 GVSGSGKSTLINDTLFPIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRS 699 GVSG GKST + +TL+ A R++ GA PA + I G E DKVIDIDQSPIGRTPRS Sbjct: 662 GVSGGGKSTFLIETLYKSAARRVMGAR-EIPAEHDRIDGFEFIDKVIDIDQSPIGRTPRS 720 Query: 700 NPATYTGVFTPVRELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDI 759 NPATYTG FTP+R+ FAG+PE++ARGY PGRFSFNV+GGRCEACQGDGVIK+EMHFLPD+ Sbjct: 721 NPATYTGAFTPIRDWFAGLPEAKARGYAPGRFSFNVKGGRCEACQGDGVIKIEMHFLPDV 780 Query: 760 YVPCDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLT 819 YV CD C GKRYNRETL++ +KGK+I +VLDMT+EE EFF AVPA+ KLQ+L DVGL Sbjct: 781 YVTCDVCHGKRYNRETLDVTFKGKSIADVLDMTVEEGVEFFAAVPAVRDKLQSLFDVGLG 840 Query: 820 YIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLR 879 YI++GQ A TLSGGEAQRVKLA+ELSKR TG+TLYILDEPTTGLHF D+ +LL++LH L Sbjct: 841 YIKVGQQANTLSGGEAQRVKLAKELSKRSTGRTLYILDEPTTGLHFHDVNKLLEMLHALV 900 Query: 880 DQGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLKPM 939 +QGN++VVIEHNL+VIKTADWI+D+GPEGG+GGGE++ +GTPE + + E S+T FLK + Sbjct: 901 EQGNSVVVIEHNLEVIKTADWIIDIGPEGGTGGGEVVATGTPEDIVKVERSYTGHFLKEL 960 Query: 940 L 940 L Sbjct: 961 L 961 Score = 173 bits (439), Expect = 3e-41, Method: Composition-based stats. Identities = 76/207 (36%), Positives = 109/207 (52%), Gaps = 15/207 (7%) Query: 403 NRPCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKE 462 C C G R RE V + + + DM++ +EFF + Sbjct: 781 YVTCDVCHGKRYNRETLDVTFKGKSIADVLDMTVEEGVEFFAAVP--------------A 826 Query: 463 IGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGV-MYVLDEPSIGLHQ 521 + D+L+ L +VGL Y+ + + A TLSGGEAQR++LA ++ G +Y+LDEP+ GLH Sbjct: 827 VRDKLQSLFDVGLGYIKVGQQANTLSGGEAQRVKLAKELSKRSTGRTLYILDEPTTGLHF 886 Query: 522 RDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIM 581 D +LL L L + GN+V+V+EH+ + I+ AD +IDIGP G GGEVVA G E I+ Sbjct: 887 HDVNKLLEMLHALVEQGNSVVVIEHNLEVIKTADWIIDIGPEGGTGGGEVVATGTPEDIV 946 Query: 582 AVPESLTGQYMSGKRKIEVPKKRVPAN 608 V S TG ++ KR A Sbjct: 947 KVERSYTGHFLKELLDRRPAGKREAAE 973 >UniRef50_O66911 UvrABC system protein A n=11 Tax=cellular organisms RepID=UVRA_AQUAE Length = 926 Score = 1136 bits (2938), Expect = 0.0, Method: Composition-based stats. Identities = 529/943 (56%), Positives = 689/943 (73%), Gaps = 27/943 (2%) Query: 1 MDKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAY 60 MD+I +RGAR HNLKNI++ IP++KL+V+TG SGSGKSSLAFDTLYAEGQRRYVESLSAY Sbjct: 1 MDRIVIRGARQHNLKNIDVEIPKNKLVVITGPSGSGKSSLAFDTLYAEGQRRYVESLSAY 60 Query: 61 ARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRC 120 ARQFL +MEKP+VD IEGLSPAI+I+QK+TS NPRSTVGT+TEI+DYLR+L+A VG+P C Sbjct: 61 ARQFLGVMEKPEVDSIEGLSPAIAIDQKTTSKNPRSTVGTVTEIYDYLRVLWANVGKPHC 120 Query: 121 PDHDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARID 180 P L+ + +++D ++ + +GKR+M+L+PI++ +KGE + L + GY R ++D Sbjct: 121 PHCGNLLSGLSAHEILDRIVEKYKGKRVMILSPIVRGKKGEFRELLRQIEKWGYSRVKVD 180 Query: 181 GEVCDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVADMDDP 240 GE+ + + P LE KKHTIE+V+DR V ++ RL E E ALE S G + +++ Sbjct: 181 GELRRVIEVPPLEKNKKHTIELVIDRLTVSEEERARLLEDVEKALEFSSGLVKIEEVESG 240 Query: 241 KAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPEL 300 K E LFS CP G+S+ EL RLFSFN+P GACP+C GLGV+ DP +I +PE Sbjct: 241 KEE--LFSEKLVCPEHGFSIPELSARLFSFNSPYGACPSCKGLGVKWEIDPAVLI-DPEK 297 Query: 301 SLAGGAIRGWDRRNFYYFQM-LKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKENIEFK 359 A A++ + F Y + + ++ +D PW L +V VLYGS N Sbjct: 298 P-AVKAVKIVESGYFNYLRFPIANVIRKLGYDPRTPWKKLPESVRATVLYGSESLN---- 352 Query: 360 YMNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGTRLRREAR 419 FEG++ ++ERR+ E ES +REE+ +I +PC C+G RLR+EA Sbjct: 353 --------------FEGIIPHLERRFLEEESERIREEIEDYIVEKPCPECKGARLRKEAL 398 Query: 420 HVYVENTPLPAISDMSIGHAMEFFNNL--KLAGQRAKIAEKILKEIGDRLKFLVNVGLNY 477 V ++ + + +M +G A EFF L KL G+ IA+++LKEI +RL FLVNVGL+Y Sbjct: 399 AVLIDGKSIWDVVNMPVGKAKEFFEELYEKLEGKEKIIADRLLKEIIERLGFLVNVGLDY 458 Query: 478 LTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDL 537 L+LSRSA TLSGGE QRIRLA+Q+G+ L GV+YVLDEPSIGLH RD +L+ TL LRDL Sbjct: 459 LSLSRSATTLSGGEMQRIRLATQLGSKLTGVLYVLDEPSIGLHPRDTSKLINTLKGLRDL 518 Query: 538 GNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRK 597 GNTV+VVEHD + I +ADHVI++GPGAG HGG +VA+G +E I + P SLTG Y+SG+++ Sbjct: 519 GNTVVVVEHDPETIESADHVIELGPGAGKHGGYLVAQGTVEEIKSHPSSLTGAYLSGRKE 578 Query: 598 IEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPI 657 I VPK+R + K +++ A+ +NLK++ + +P+GLF CITGVSGSGKSTLI D L+ Sbjct: 579 IPVPKERRKPS-GKFIRIVRAKEHNLKNINVDIPLGLFVCITGVSGSGKSTLIYDILYKY 637 Query: 658 AQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAG 717 A+ G + I+GLE+ DKVI+IDQSPIGRTPRSNPATYT VF +R LFA Sbjct: 638 AKNYFYGTH-EQVGEVEKIEGLENIDKVINIDQSPIGRTPRSNPATYTKVFDLIRNLFAQ 696 Query: 718 VPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLE 777 PE++ARGY PGRFSFNV+GGRCEACQG+GVIKVEMHFLP +YV C+ CKGKRYNRETLE Sbjct: 697 TPEAKARGYKPGRFSFNVKGGRCEACQGEGVIKVEMHFLPPVYVTCEVCKGKRYNRETLE 756 Query: 778 IKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQR 837 I YKGK I +VL+MT++EA +FF+ PA+ RKLQ L DVGL YI+LGQ A TLSGGEAQR Sbjct: 757 ITYKGKNIADVLEMTVDEAYDFFENHPAIRRKLQILKDVGLGYIKLGQPAPTLSGGEAQR 816 Query: 838 VKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKT 897 +KLARELSK+ TG+TLY+LDEPTTGLH D+++L+DVL +L D+GNT+VVIEHNLDVIK Sbjct: 817 IKLARELSKKETGRTLYLLDEPTTGLHMDDVKKLIDVLQRLVDKGNTVVVIEHNLDVIKC 876 Query: 898 ADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLKPML 940 ADWI+DLGPEGG GG+++ GTPE VA+ S+T ++L+ L Sbjct: 877 ADWIIDLGPEGGERGGQVVAVGTPEEVAQNPNSYTGKYLRKYL 919 >UniRef50_P63381 UvrABC system protein A n=53 Tax=Bacteria RepID=UVRA_MYCBO Length = 972 Score = 1132 bits (2928), Expect = 0.0, Method: Composition-based stats. Identities = 532/952 (55%), Positives = 687/952 (72%), Gaps = 16/952 (1%) Query: 2 DKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYA 61 D++ V+GAR HNL++++L +PRD LIV TGLSGSGKSSLAFDT++AEGQRRYVESLSAYA Sbjct: 3 DRLIVKGAREHNLRSVDLDLPRDALIVFTGLSGSGKSSLAFDTIFAEGQRRYVESLSAYA 62 Query: 62 RQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCP 121 RQFL M+KPDVD IEGLSPA+SI+QKST+ NPRSTVGTITE++DYLRLL+AR G P CP Sbjct: 63 RQFLGQMDKPDVDFIEGLSPAVSIDQKSTNRNPRSTVGTITEVYDYLRLLYARAGTPHCP 122 Query: 122 DHDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARIDG 181 +A QT Q+VD VL+ PEG R ++LAP+++ RKGE + L +QGY R R+DG Sbjct: 123 TCGERVARQTPQQIVDQVLAMPEGTRFLVLAPVVRTRKGEFADLFDKLNAQGYSRVRVDG 182 Query: 182 EVCDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVADMDDPK 241 V L+DPPKL+ Q+KH IEVVVDR V+ +RL +S ETAL L+ G V+ +D Sbjct: 183 VVHPLTDPPKLKKQEKHDIEVVVDRLTVKAAAKRRLTDSVETALNLADGIVVLEFVDHEL 242 Query: 242 A---EELLFSANFACPICG-YSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQN 297 E FS ACP ++ +LEPR FSFN+P GACP C GLG+++ DP+ V+ + Sbjct: 243 GAPHREQRFSEKLACPNGHALAVDDLEPRSFSFNSPYGACPECSGLGIRKEVDPELVVPD 302 Query: 298 PELSLAGGAIRGWDRRNF--YYFQMLKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKEN 355 P+ +LA GA+ W + Y+ +M+ L + FDV+ PW L A K +L G+ E Sbjct: 303 PDRTLAQGAVAPWSNGHTAEYFTRMMAGLGEALGFDVDTPWRKLPAKARKAILEGA-DEQ 361 Query: 356 IEFKYMNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGTRLR 415 + +Y N G T FEGVL ++R+ +TES ++E F+ + PC C GTRL+ Sbjct: 362 VHVRYRNRYGRTRSYYADFEGVLAFLQRKMSQTESEQMKERYEGFMRDVPCPVCAGTRLK 421 Query: 416 REARHVYVEN--------TPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDRL 467 E V + + + ++SI +F N L L + IA ++LKEI RL Sbjct: 422 PEILAVTLAGESKGEHGAKSIAEVCELSIADCADFLNALTLGPREQAIAGQVLKEIRSRL 481 Query: 468 KFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERL 527 FL++VGL YL+LSR+A TLSGGEAQRIRLA+QIG+GLVGV+YVLDEPSIGLHQRDN RL Sbjct: 482 GFLLDVGLEYLSLSRAAATLSGGEAQRIRLATQIGSGLVGVLYVLDEPSIGLHQRDNRRL 541 Query: 528 LGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESL 587 + TL LRDLGNT+IVVEHDED I AD ++DIGPGAG HGG +V GP + ++ +S+ Sbjct: 542 IETLTRLRDLGNTLIVVEHDEDTIEHADWIVDIGPGAGEHGGRIVHSGPYDELLRNKDSI 601 Query: 588 TGQYMSGKRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKS 647 TG Y+SG+ IE+P R +P + L + GAR +NL+ + ++ P+G+ T +TGVSGSGKS Sbjct: 602 TGAYLSGRESIEIPAIRRSVDPRRQLTVVGAREHNLRGIDVSFPLGVLTSVTGVSGSGKS 661 Query: 648 TLINDTLFPIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGV 707 TL+ND L + +LNGA P + + GL++ DK++ +DQSPIGRTPRSNPATYTGV Sbjct: 662 TLVNDILAAVLANRLNGARQV-PGRHTRVTGLDYLDKLVRVDQSPIGRTPRSNPATYTGV 720 Query: 708 FTPVRELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCK 767 F +R LFA E++ RGY PGRFSFNV+GGRCEAC GDG IK+EM+FLPD+YVPC+ C+ Sbjct: 721 FDKIRTLFAATTEAKVRGYQPGRFSFNVKGGRCEACTGDGTIKIEMNFLPDVYVPCEVCQ 780 Query: 768 GKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSA 827 G RYNRETLE+ YKGKT+ EVLDM+IEEA EFF+ + + R L+TL+DVGL Y+RLGQ A Sbjct: 781 GARYNRETLEVHYKGKTVSEVLDMSIEEAAEFFEPIAGVHRYLRTLVDVGLGYVRLGQPA 840 Query: 828 TTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVV 887 TLSGGEAQRVKLA EL KR TG+T+YILDEPTTGLHF DI++LL+V++ L D+GNT++V Sbjct: 841 PTLSGGEAQRVKLASELQKRSTGRTVYILDEPTTGLHFDDIRKLLNVINGLVDKGNTVIV 900 Query: 888 IEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLKPM 939 IEHNLDVIKT+DWI+DLGPEGG+GGG ++ GTPE VA AS+T +FL + Sbjct: 901 IEHNLDVIKTSDWIIDLGPEGGAGGGTVVAQGTPEDVAAVPASYTGKFLAEV 952 >UniRef50_Q9WYV0 UvrABC system protein A n=8 Tax=Bacteria RepID=UVRA_THEMA Length = 916 Score = 1123 bits (2906), Expect = 0.0, Method: Composition-based stats. Identities = 507/945 (53%), Positives = 665/945 (70%), Gaps = 34/945 (3%) Query: 1 MDKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAY 60 M++I V+GAR HNLKNI + IP+++L+V+TG+SGSGKSSLA DT+YAEGQRRY+ESLS Y Sbjct: 1 MNEIVVKGARVHNLKNITVRIPKNRLVVITGVSGSGKSSLAMDTIYAEGQRRYLESLSTY 60 Query: 61 ARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRC 120 ARQFL ++KPDVD IEGLSPAI+I+QK+ SHNPRSTVGT+TEI+DYLR+L+AR+G+ C Sbjct: 61 ARQFLGNLKKPDVDEIEGLSPAIAIDQKTVSHNPRSTVGTVTEIYDYLRVLYARIGKAHC 120 Query: 121 PDHDVPLAAQTVSQMVDNVL-SQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARI 179 P+ PL +++ +++ ++ S EG R+ +LAP+ E+KG K +E S+G+ R I Sbjct: 121 PECGRPLEKKSIDEILQDLFNSFKEGSRIYILAPVATEKKGTFKKEIEEFISKGFARIEI 180 Query: 180 DGEVCDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVADMDD 239 DGE+ L + P+L+ K+HT+++VVDR + R+ +S E A+ G + ++D Sbjct: 181 DGEIYRLEEVPELDKNKRHTVKLVVDRLILETRNEHRILDSLELAMREGKGFVEIRNVDT 240 Query: 240 PKAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPE 299 E +FS N CP+CG E+ P+LFSFN+P GACP C GLG DP VI + E Sbjct: 241 --GESKIFSENLMCPVCGIGFPEITPKLFSFNSPYGACPNCHGLGFTFEVDPSLVI-DEE 297 Query: 300 LSLAGGAIRG--WDRRNFYYFQMLKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKENIE 357 S+ GAI WDRR + + + P+ L +V + +LYG Sbjct: 298 KSVLEGAIIPYRWDRRLSRW---VAREIEKRGVSPHLPFKDLPEDVKEFILYGDD----- 349 Query: 358 FKYMNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAK-FISNRPCASCEGTRLRR 416 FEGV+ ++R ++ETES ++E L K FI R C+ C G RL R Sbjct: 350 ---------------RFEGVVPKVQRWHRETESPEMKEWLEKNFIVQRTCSVCGGRRLNR 394 Query: 417 EARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNVGLN 476 EA V + + +++SI +EF NL L + +I ++LKEI RL+FLV+VGL Sbjct: 395 EALSVKINGLNIHEFTELSISEELEFLKNLNLTEREREIVGELLKEIEKRLEFLVDVGLE 454 Query: 477 YLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRD 536 YLTLSRSA TLSGGE+QRIRLA+QIG+GL GV+YVLDEP+IGLH RD ERL+ TL LRD Sbjct: 455 YLTLSRSATTLSGGESQRIRLATQIGSGLTGVIYVLDEPTIGLHPRDTERLIKTLKKLRD 514 Query: 537 LGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPES-LTGQYMSGK 595 LGNTVIVVEHDE+ IR ADH+IDIGPG G +GG VV +G ++ ++ P+S LTG+Y+SGK Sbjct: 515 LGNTVIVVEHDEEVIRNADHIIDIGPGGGTNGGRVVFQGTVDELLKNPDSSLTGEYLSGK 574 Query: 596 RKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLF 655 RKI V K R P LK+ G R NNLK++ + +P+G+F C+TGVSGSGKS+L+ +TL+ Sbjct: 575 RKITVNKTR--RLPYASLKIKGVRHNNLKNIDVEIPLGVFVCVTGVSGSGKSSLVMETLY 632 Query: 656 PIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELF 715 P L+ + + I+G E+ DK+I IDQSPIGRTPRSNPATYT VF +R LF Sbjct: 633 PALMNLLHKTKLP-AGEFDSIEGHENIDKMIAIDQSPIGRTPRSNPATYTKVFDEIRSLF 691 Query: 716 AGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRET 775 A P ++ARGY RFSFN++GGRCEACQG G +K+EM FLPD+YV CD CKGKRYNRET Sbjct: 692 AMTPAAKARGYNKSRFSFNLKGGRCEACQGQGYVKIEMLFLPDVYVECDVCKGKRYNRET 751 Query: 776 LEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEA 835 LEI YKGK I ++LDMT++EA EFF +P++ R LQ L DVGL Y++LGQ ATTLSGGEA Sbjct: 752 LEITYKGKNISDILDMTVDEALEFFKNIPSIKRTLQVLHDVGLGYVKLGQPATTLSGGEA 811 Query: 836 QRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVI 895 QR+KLA EL KR TG+TLYILDEPT GLHF D+++L++VLH+L D+GNT++VIEHNLDVI Sbjct: 812 QRIKLASELRKRDTGRTLYILDEPTVGLHFEDVRKLVEVLHRLVDRGNTVIVIEHNLDVI 871 Query: 896 KTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLKPML 940 K AD I+DLGPEGG GG I+ +GTPE +A+ S+T RFLK +L Sbjct: 872 KNADHIIDLGPEGGKEGGYIVATGTPEEIAKNPHSYTGRFLKNVL 916 >UniRef50_A2C5J2 Excinuclease ABC, A subunit, ATP/GTP-binding site motif A (P-loop):ABC transporter n=8 Tax=cellular organisms RepID=A2C5J2_PROM1 Length = 980 Score = 1119 bits (2895), Expect = 0.0, Method: Composition-based stats. Identities = 523/958 (54%), Positives = 689/958 (71%), Gaps = 23/958 (2%) Query: 2 DKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYA 61 D I +RGAR HNLKN++L IPR++L+V TG+SGSGKSSLAFDT++AEGQRRYVESLSAYA Sbjct: 21 DLITIRGARQHNLKNVDLSIPRNQLVVFTGVSGSGKSSLAFDTIFAEGQRRYVESLSAYA 80 Query: 62 RQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCP 121 RQFL ++KPDVD IEGLSPAISI+QKSTSHNPRSTVGT+TEI DY RLLF R GEP CP Sbjct: 81 RQFLGQVDKPDVDSIEGLSPAISIDQKSTSHNPRSTVGTVTEIQDYFRLLFGRAGEPHCP 140 Query: 122 DHDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARIDG 181 + P+ Q++ +MVD + + PEG R LLAP+++ +KG H+K L LA++G++R RI+ Sbjct: 141 ECSRPIKPQSIDEMVDQIKTLPEGSRYQLLAPVVRGKKGTHSKLLSGLAAEGFVRVRINK 200 Query: 182 EVCDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVADMDDPK 241 EV +L+D +L+ + H+IEVVVDR R+ + +RL +S T L+ G A+V + Sbjct: 201 EVRELADNIELDKNQVHSIEVVVDRLIAREGIEERLTDSLSTTLKRGDGLAIVEVVPKKN 260 Query: 242 AE-------ELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRV 294 E E LFS NFACP+ G + EL PRLFSFN+P GACP C GLG + F +RV Sbjct: 261 EELPKGIEKERLFSENFACPVHGAVIEELSPRLFSFNSPYGACPDCHGLGHLKKFTCERV 320 Query: 295 IQNPELSLAGGAIRGW-DRRNFYYFQMLKSLADHYKFDVEAPWGSLSANVHKVVLYGSGK 353 + +P L + A+ W D+ N YYF +L S+ + + F+++ PW L ++L GS K Sbjct: 321 VPDPSLPVYA-AVAPWSDKDNSYYFSLLFSVGEAFGFEIKTPWKDLKEEQKNILLNGS-K 378 Query: 354 ENIEFKYMNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGTR 413 E I K + S + PFEG+L +ER+ ++ AVR++L K++ PCASC G R Sbjct: 379 EPILIKVDSRYKQDSGFKRPFEGILPILERQLQDANGEAVRQKLEKYLELVPCASCHGKR 438 Query: 414 LRREARHVYVENTPLPAISDMSIGHAMEFFNNLK-----------LAGQRAKIAEKILKE 462 LR EA V + + ++ S+ +E L L+ ++ KI E +LKE Sbjct: 439 LRPEALAVKLGPFAITDLTSSSVSTTLENVEELMGIETTNNSKQLLSNKQKKIGELVLKE 498 Query: 463 IGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQR 522 I RL+FL++VGL+YLTL R A TLSGGEAQRIRLA+QIGAGL GV+YVLDEPSIGLHQR Sbjct: 499 IRLRLQFLLDVGLDYLTLDRPAMTLSGGEAQRIRLATQIGAGLTGVLYVLDEPSIGLHQR 558 Query: 523 DNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMA 582 DN+RLL TL LRDLGNT++VVEHDED IR+ADH++DIGPGAGVHGGE++A+G L+ ++ Sbjct: 559 DNDRLLSTLKKLRDLGNTLVVVEHDEDTIRSADHLVDIGPGAGVHGGEIIAQGSLDNLLT 618 Query: 583 VPESLTGQYMSGKRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVS 642 +SLTG Y+SG+ I P R + K+ +L NNLK+V++ P+G +TGVS Sbjct: 619 AKKSLTGAYLSGRSSIPTPTSRRDSVQRKL-RLIDCNKNNLKNVSVDFPLGRLVAVTGVS 677 Query: 643 GSGKSTLINDTLFPIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPA 702 GSGKSTLIN+ L P L G + P ++++G++ DKVI IDQSPIGRTPRSN A Sbjct: 678 GSGKSTLINELLHPALNHSL-GLKVPFPKGLKELKGIKSIDKVIVIDQSPIGRTPRSNTA 736 Query: 703 TYTGVFTPVRELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVP 762 TYTG F P+R+LFA E++ARGY G+FSFNV+GGRCEAC+G GV +EM+FLPD+YV Sbjct: 737 TYTGAFDPIRQLFATSVEAKARGYQAGQFSFNVKGGRCEACRGQGVNVIEMNFLPDVYVQ 796 Query: 763 CDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIR 822 CD CKG R+NRETL++KYK +I +VL+MT+E+A + F A+P A +L+TL+DVGL YI+ Sbjct: 797 CDVCKGARFNRETLQVKYKNYSISDVLEMTVEQAVDVFSAIPQAADRLRTLLDVGLGYIK 856 Query: 823 LGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQG 882 LGQ A TLSGGEAQRVKLA ELS+R TG+TLY++DEPTTGL F D+ +L+DV+ +L D+G Sbjct: 857 LGQPAPTLSGGEAQRVKLATELSRRATGKTLYLIDEPTTGLSFYDVHKLMDVIQRLVDKG 916 Query: 883 NTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLKPML 940 N+I+VIEHNLDVI+ +DW++D+GPEGG+ GGEI+ GTPE VA + SHT +LK +L Sbjct: 917 NSIIVIEHNLDVIRCSDWVIDMGPEGGNRGGEIIAMGTPEEVATNKNSHTGGYLKKVL 974 Score = 180 bits (457), Expect = 2e-43, Method: Composition-based stats. Identities = 70/201 (34%), Positives = 111/201 (55%), Gaps = 15/201 (7%) Query: 403 NRPCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKE 462 C C+G R RE V +N + + +M++ A++ F+ + A Sbjct: 794 YVQCDVCKGARFNRETLQVKYKNYSISDVLEMTVEQAVDVFSAIPQAA------------ 841 Query: 463 IGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGV-MYVLDEPSIGLHQ 521 DRL+ L++VGL Y+ L + A TLSGGEAQR++LA+++ G +Y++DEP+ GL Sbjct: 842 --DRLRTLLDVGLGYIKLGQPAPTLSGGEAQRVKLATELSRRATGKTLYLIDEPTTGLSF 899 Query: 522 RDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIM 581 D +L+ + L D GN++IV+EH+ D IR +D VID+GP G GGE++A G E + Sbjct: 900 YDVHKLMDVIQRLVDKGNSIIVIEHNLDVIRCSDWVIDMGPEGGNRGGEIIAMGTPEEVA 959 Query: 582 AVPESLTGQYMSGKRKIEVPK 602 S TG Y+ ++ + Sbjct: 960 TNKNSHTGGYLKKVLEMHPSR 980 Score = 86.2 bits (212), Expect = 6e-15, Method: Composition-based stats. Identities = 54/219 (24%), Positives = 80/219 (36%), Gaps = 29/219 (13%) Query: 607 ANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGAT 666 ++ E ++ + GAR +NLK+V L++P TGVSGSGKS+L DT+F QR+ + Sbjct: 17 SSTEDLITIRGARQHNLKNVDLSIPRNQLVVFTGVSGSGKSSLAFDTIFAEGQRRYVESL 76 Query: 667 IAEPAPYRDIQGLEHFDKV------IDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPE 720 A + D + I IDQ PRS T T + R LF E Sbjct: 77 SAYARQFLGQVDKPDVDSIEGLSPAISIDQKSTSHNPRSTVGTVTEIQDYFRLLFGRAGE 136 Query: 721 SRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKY 780 C C + + I + G RY ++ Sbjct: 137 P-----------------HCPECSRPIKPQSIDEMVDQIKTLPE---GSRYQLLAPVVRG 176 Query: 781 KGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLT 819 K T ++L A E F V + ++ L Sbjct: 177 KKGTHSKLLS---GLAAEGFVRVRINKEVRELADNIELD 212 >UniRef50_Q46577 UvrABC system protein A n=5 Tax=Bacteria RepID=UVRA_DEIRA Length = 1016 Score = 1117 bits (2890), Expect = 0.0, Method: Composition-based stats. Identities = 539/979 (55%), Positives = 691/979 (70%), Gaps = 45/979 (4%) Query: 2 DKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYA 61 DK+ VRGAR HNLK+I + +PRD+ +V+TG+SGSGKS+LAFDT+YAEGQRRYVESLSAYA Sbjct: 3 DKLIVRGAREHNLKDITVELPRDRFVVITGVSGSGKSTLAFDTIYAEGQRRYVESLSAYA 62 Query: 62 RQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCP 121 RQFL LMEKPDVD I GLSPAISI+QK+TSHNPRSTVGT+TEIHDYLRLL+ARVG P CP Sbjct: 63 RQFLGLMEKPDVDSITGLSPAISIDQKTTSHNPRSTVGTVTEIHDYLRLLYARVGTPYCP 122 Query: 122 DHDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARIDG 181 + Q+ S++ D +L+ KR +LLAP ++ RKGE+ K +L +GY R R+DG Sbjct: 123 ICGRKIEKQSPSEVTDRLLAGFPDKRAILLAPAVRGRKGEYKKLFADLRREGYARVRVDG 182 Query: 182 EVCDLSDPPKLELQK--KHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVADMD- 238 + +L + KL+L+K KH +++V+DR +R+ R+AES E + G V D Sbjct: 183 TLYELEEAEKLKLEKFEKHDVDIVIDRLTLRESDRSRIAESVELGIRRGEGLLRVLLPDA 242 Query: 239 --DPKAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQ 296 D A E L+S FACP G + ELEPR FSFN+P GAC C G+G +Q F P+R+I Sbjct: 243 GEDGGAHEELYSEKFACPEHGSVLEELEPRSFSFNSPYGACGDCAGIGAKQEFSPERII- 301 Query: 297 NPELSLAGGAIRGWDRRNF----YYFQMLKSLADHYKFDVEAPWGSLSANVHKVVLYGSG 352 + +LS+AGGAI W ++ YY+ LK+LA+H FD++ PW L A K VL+G G Sbjct: 302 DEKLSIAGGAIIPWTKKGADAGIYYWDKLKALAEHLDFDLKTPWKDLPAKAQKAVLHGPG 361 Query: 353 KENIEFKYMNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGT 412 E E Y +T FEGV+ N+ERRY +TES +RE L + + RPC +C GT Sbjct: 362 -EAFEVVYRRGGKETMRFMTEFEGVITNLERRYADTESEFMRERLEELMELRPCPTCGGT 420 Query: 413 RLRREARHVYVENTPLPAISDMSIGHAMEFFNNL-------------------------- 446 R + E V V + S MS+ A FF L Sbjct: 421 RYKPEILAVRVGGLNISQTSGMSVLDADAFFQQLQEGELDHAAIEPFLKRHTGGTAKAHG 480 Query: 447 ------KLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQ 500 L A +A IL+ I RLKFLV+VGL+YL+L R+A TLSGGEAQRIRLA+Q Sbjct: 481 PLHYEYDLGTFGAAVAAPILRAIRTRLKFLVDVGLDYLSLDRTANTLSGGEAQRIRLATQ 540 Query: 501 IGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDI 560 +G+GL GV+YVLDEPSIGLH +DN RL+GTL +LRDLGN+++VVEHDED + AD++ID+ Sbjct: 541 VGSGLTGVLYVLDEPSIGLHPKDNGRLIGTLKNLRDLGNSLLVVEHDEDTMLEADYLIDM 600 Query: 561 GPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEVPKKRVPANPEKVLKLTGARG 620 GPGAGVHGGEV+A G E + SLTG+Y+ G+ KIEVP +R K LK+ GAR Sbjct: 601 GPGAGVHGGEVIASGTPEQVKQDKNSLTGKYLRGEMKIEVPAERR-PGNGKFLKVFGARQ 659 Query: 621 NNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAEPAPYRDIQGLE 680 NNL+DV +++P+G T +TG SGSGKSTLI+D L R+LNGA P Y I+G+E Sbjct: 660 NNLQDVDVSIPLGTMTVVTGPSGSGKSTLIHDILHATLARELNGAKTT-PGLYDRIEGME 718 Query: 681 HFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESRARGYTPGRFSFNVRGGRC 740 DKVI+IDQSPIGRTPRSNPATYTGVFT +R+LF PE+R RGY GRFSFNV+GGRC Sbjct: 719 QLDKVIEIDQSPIGRTPRSNPATYTGVFTEIRDLFTRTPEARRRGYQAGRFSFNVKGGRC 778 Query: 741 EACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFF 800 E C+GDGV+K+EM+FLPDIYVPC+ C G RYNRETLE+KY KTI +VLD+T+E+A EFF Sbjct: 779 EHCKGDGVMKIEMNFLPDIYVPCEVCHGARYNRETLEVKYNHKTIADVLDLTVEDAHEFF 838 Query: 801 DAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPT 860 +A+P + RK+Q L+DVGL Y+++GQ +TTLSGGEAQR+KLA ELSKR TG+T+YILDEPT Sbjct: 839 EAIPTIERKMQLLLDVGLGYMKIGQPSTTLSGGEAQRIKLATELSKRATGRTIYILDEPT 898 Query: 861 TGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGT 920 TGLHF D+++L+DVL +L + GNT+V+IEHNLDV+K+AD+++DLGPEGG GG ++ GT Sbjct: 899 TGLHFEDVRKLMDVLQRLAEGGNTLVIIEHNLDVMKSADYLIDLGPEGGVRGGTVVAVGT 958 Query: 921 PETVAECEASHTARFLKPM 939 PE VA S+T +L+ + Sbjct: 959 PEEVAAHPTSYTGEYLRKV 977 Score = 194 bits (494), Expect = 1e-47, Method: Composition-based stats. Identities = 81/280 (28%), Positives = 127/280 (45%), Gaps = 42/280 (15%) Query: 353 KENIEFKYMNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFIS---------- 402 + IE + GV + + T + R A S Sbjct: 721 DKVIEIDQSPIGRTPRSNPATYTGVFTEIRDLFTRTPEARRRGYQAGRFSFNVKGGRCEH 780 Query: 403 -----------------NRPCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNN 445 PC C G R RE V + + + D+++ A EFF Sbjct: 781 CKGDGVMKIEMNFLPDIYVPCEVCHGARYNRETLEVKYNHKTIADVLDLTVEDAHEFFEA 840 Query: 446 LKLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGL 505 + I +++ L++VGL Y+ + + + TLSGGEAQRI+LA+++ Sbjct: 841 IPT--------------IERKMQLLLDVGLGYMKIGQPSTTLSGGEAQRIKLATELSKRA 886 Query: 506 VGV-MYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGA 564 G +Y+LDEP+ GLH D +L+ L L + GNT++++EH+ D +++AD++ID+GP Sbjct: 887 TGRTIYILDEPTTGLHFEDVRKLMDVLQRLAEGGNTLVIIEHNLDVMKSADYLIDLGPEG 946 Query: 565 GVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEVPKKR 604 GV GG VVA G E + A P S TG+Y+ I + R Sbjct: 947 GVRGGTVVAVGTPEEVAAHPTSYTGEYLRKVPGIVAAEPR 986 >UniRef50_A7NS89 Excinuclease ABC, A subunit n=3 Tax=Bacteria RepID=A7NS89_ROSCS Length = 1043 Score = 1108 bits (2867), Expect = 0.0, Method: Composition-based stats. Identities = 541/1030 (52%), Positives = 693/1030 (67%), Gaps = 92/1030 (8%) Query: 2 DKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYA 61 D I ++GAR HNLK I+L IPRDKL+V+TG+SGSGKSSLAFDTLYAEGQRRYVESLSAYA Sbjct: 4 DAIVIKGAREHNLKGIDLEIPRDKLVVLTGVSGSGKSSLAFDTLYAEGQRRYVESLSAYA 63 Query: 62 RQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCP 121 RQFL MEKP VD IEGLSPAI+IEQKS S NPRSTVGT+TEI+DYLRLL+ARVG C Sbjct: 64 RQFLGQMEKPKVDAIEGLSPAIAIEQKSASKNPRSTVGTVTEIYDYLRLLYARVGTQHCH 123 Query: 122 DHDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARIDG 181 P+++Q+ QMV+ VL+ P G R M+LAP++ +RKGE+ ++G+ R R+DG Sbjct: 124 VCGRPVSSQSAEQMVNRVLTLPTGTRFMVLAPLVSQRKGEYKDVFAEARAEGFARVRVDG 183 Query: 182 EVCDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQR------------------------- 216 E+ DL+ KL + KHTIE+V+DR + R Sbjct: 184 EIFDLAGEIKLNKKVKHTIEIVIDRLAMPARDAARDQVRSSDAPIGRAQEGSQSEWDAFV 243 Query: 217 --LAESFETALELSGGTAVVADMDD-PKAEELLFSANFACPICGYSMRELEPRLFSFNNP 273 L +S E AL + G +++ + AEE L S C CG S EL P++FSFN+P Sbjct: 244 TRLTDSVEQALRVGEGQLIISIQNKTGAAEEWLMSEANTCTHCGISFPELSPQMFSFNSP 303 Query: 274 AGACPTCDGLGVQQYFDPDRVIQNPELSLAGGAIRGW----DRRNFYYFQMLKSLADHYK 329 GACP C GLGV+ DP ++ NP L+L GA+ W +R+ + ++ L ++A HY Sbjct: 304 QGACPECTGLGVRLEVDPLLLVPNPSLTLHEGAVTYWGELRKKRDSWGYRALLAIARHYG 363 Query: 330 FDVEAPWGSLSANVHKVVLYGSGKENIEFKYMNDRGDTSIRR-HPFEGVLHNMERRYKET 388 FD++ PW LS V++YGSGKE I F++ ++ GD+ +EG+ + RR+++T Sbjct: 364 FDLDTPWEQLSEQARHVIIYGSGKERIRFQWGDEGGDSRGEFTRTWEGLASEIRRRFQQT 423 Query: 389 ESSAVREELAKFISNRPCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNL-- 446 S RE F+S +PC +C G RLR E+ V V + ++ M+I A+ + N L Sbjct: 424 GSDYTREYYQSFMSEQPCPACSGARLRPESLAVRVGGLSIRDVTRMTIAGALAWVNALSG 483 Query: 447 --------------------------------KLAGQRAKIAEKILKEIGDRLKFLVNVG 474 L + I +LKEI +RL FL+NVG Sbjct: 484 ISGNIAHLADLEGQVMPGVVAGNGAAHHGAVTPLTDYQMAIVNDVLKEIRERLGFLLNVG 543 Query: 475 LNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHL 534 L+YLTL R A TLSGGEAQRIRLASQIG+GLVGV Y+LDEPSIGLHQRDN +LL TL+ L Sbjct: 544 LHYLTLERPAPTLSGGEAQRIRLASQIGSGLVGVTYILDEPSIGLHQRDNRKLLDTLLKL 603 Query: 535 RDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSG 594 RDLGNTV+VVEHD + ++AAD +ID GPGAGV GG+VVA GP + A PESLTG Y++G Sbjct: 604 RDLGNTVVVVEHDLETMQAADWIIDFGPGAGVKGGQVVAAGPPNVVAASPESLTGAYLAG 663 Query: 595 KRKIEVPKKRVPANPEK------------------------VLKLTGARGNNLKDVTLTL 630 + +I P++R A L+L GA NNL+DVT+ Sbjct: 664 RLEIPTPQQRRTARVRPVANGLQDAPRRRRVDHQSDLAEGPWLELEGATMNNLRDVTVRF 723 Query: 631 PVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQ 690 P+G+F C+TGVSGSGKS+LI +TL+P +L+ A + +P P+R ++GLEH DKVIDIDQ Sbjct: 724 PLGVFMCVTGVSGSGKSSLITETLYPALANRLHRAQL-KPGPFRALRGLEHLDKVIDIDQ 782 Query: 691 SPIGRTPRSNPATYTGVFTPVRELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIK 750 PIGRTPRSNPATY +F +RELFA E++ RGY GRFSFN++GGRCEAC+G+G + Sbjct: 783 QPIGRTPRSNPATYVKLFDLIRELFASTNEAKLRGYNAGRFSFNLKGGRCEACEGNGEKR 842 Query: 751 VEMHFLPDIYVPCDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKL 810 ++M FL D++V CD CKGKRYNRETL++KYKGK+I +VLDM ++ A EFFD VP + R L Sbjct: 843 IDMQFLADVWVRCDVCKGKRYNRETLQVKYKGKSIADVLDMDVQTALEFFDNVPRIKRML 902 Query: 811 QTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQ 870 QTL DVGL YI+LGQSATTLSGGEAQRVKLA+EL++ TG+T+YILDEPTTGLHFAD+Q+ Sbjct: 903 QTLHDVGLDYIKLGQSATTLSGGEAQRVKLAKELARVATGRTMYILDEPTTGLHFADVQR 962 Query: 871 LLDVLHKLRDQGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEAS 930 LL VLH+L D GNT++VIEHNLDVIKTADWI+D+GPEGG GGG ++ GTPE VA EAS Sbjct: 963 LLTVLHRLVDAGNTVLVIEHNLDVIKTADWIIDMGPEGGDGGGTVVAVGTPEEVAMIEAS 1022 Query: 931 HTARFLKPML 940 HT RFL+ +L Sbjct: 1023 HTGRFLREIL 1032 >UniRef50_D0MK77 Excinuclease ABC, A subunit n=2 Tax=Bacteroidetes RepID=D0MK77_RHOM4 Length = 981 Score = 1098 bits (2839), Expect = 0.0, Method: Composition-based stats. Identities = 503/941 (53%), Positives = 664/941 (70%), Gaps = 8/941 (0%) Query: 2 DKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYA 61 D I +RGAR HNLKNI+L IPR++L+V+TGLSGSGKSSLAFDT+YAEGQRRY+ESLSAYA Sbjct: 3 DCIVIRGAREHNLKNIDLDIPRERLVVITGLSGSGKSSLAFDTIYAEGQRRYLESLSAYA 62 Query: 62 RQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCP 121 RQFL ++E+PDVD I+GLSP I+IEQK+ S NPRSTVGT+TE++D+LRLL+ARV Sbjct: 63 RQFLGMLERPDVDFIDGLSPVIAIEQKTVSQNPRSTVGTVTEVYDFLRLLYARVATAYSH 122 Query: 122 DHDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARIDG 181 P+ QT ++++++LS PEG RL++LAP+++ RKG + + E +A QG+ R R+DG Sbjct: 123 ISGKPMRRQTDDEIINHILSFPEGTRLLILAPVVRGRKGHYRELFEQIARQGFERVRVDG 182 Query: 182 EVCDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVADMD-DP 240 E+ +++ KL+ K H IEVVVDR VR D+ R+ +S + AL + GG + ++ D Sbjct: 183 ELREITPGMKLDRYKTHDIEVVVDRIVVRPDIRPRVHDSVQIALGMGGGVLIAHVLNPDG 242 Query: 241 KAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPEL 300 + +FS + CP G S + P FSFN+P GACP C+GLG + DPD VI +P Sbjct: 243 MGTDHVFSRHLYCPEDGVSYDDPSPNTFSFNSPYGACPACNGLGTRLEIDPDLVIPDPSK 302 Query: 301 SLAGGAIRGWDRRNF-YYFQMLKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKENIEFK 359 S+ G + R + F L+++A Y FD + P G+L+ +V+L G+G E + Sbjct: 303 SINEGGLAPLGRPRDVWIFSQLRAVAAAYGFDFDTPLGALTEEQRRVLLEGAGDREFEIE 362 Query: 360 YMNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGTRLRREAR 419 Y + T RH F G+ + + S + R F+ C +C G RL+ E+ Sbjct: 363 YRF-KDRTLRYRHRFGGIYEYLHHLREHAGSVSQRRWAESFMREMTCQACGGARLKPESL 421 Query: 420 HVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLT 479 + + ++ M + F + L+ GQ+A IA ILKEI +RL FL+ VG+ YLT Sbjct: 422 AFRIGGKNIAELAHMDLVSLRRFLSELQFEGQKALIARPILKEILERLGFLIEVGVGYLT 481 Query: 480 LSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGN 539 L R A TLSGGE+QRIRLA+Q+G+ L GV+YVLDEPSIGLH RD+ RL+ L LRDLGN Sbjct: 482 LDRPARTLSGGESQRIRLAAQLGSQLTGVLYVLDEPSIGLHPRDHHRLIDALKLLRDLGN 541 Query: 540 TVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLE--AIMAVPESLTGQYMSGKRK 597 +++VVEHD + I AAD+VID+GPGAG HGG VVA GP + + SLT Y+ G R Sbjct: 542 SILVVEHDREMIEAADYVIDLGPGAGEHGGHVVAAGPPDRLEVRDGHVSLTAAYLKGARY 601 Query: 598 IEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPI 657 I VP++R N +++ L GARG+NLK L LP+G F C+TGVSGSGKS+LIN TL+PI Sbjct: 602 IPVPRERRTGNGHRLV-LYGARGHNLKGDPLVLPLGTFICVTGVSGSGKSSLINQTLYPI 660 Query: 658 AQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAG 717 R + A + P PY I+GLEH DKVIDIDQ PIGRTPRSNPATYTG+F+ +R+LFA Sbjct: 661 LARHFHNARLV-PLPYERIEGLEHLDKVIDIDQKPIGRTPRSNPATYTGLFSHIRDLFAR 719 Query: 718 VPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLE 777 +PE++ RGY PGRFSFNV+GGRCE C+G GV+K+EM+FLPD++V C+ C+G+RYN ETLE Sbjct: 720 LPEAQLRGYKPGRFSFNVKGGRCETCKGAGVVKLEMNFLPDVHVTCETCRGRRYNAETLE 779 Query: 778 IKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQR 837 ++Y+GK+I +VL+MT++EA FF+ +P +ARKL+TL VGL YIRLGQ ATTLSGGEAQR Sbjct: 780 VRYRGKSIADVLEMTVDEALAFFENMPRIARKLRTLQAVGLGYIRLGQPATTLSGGEAQR 839 Query: 838 VKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKT 897 +KLARELS+ GTG TLYILDEPTTGLHF DI+ LL VL L +GNT++VIEHNLDVIK Sbjct: 840 IKLARELSRPGTGNTLYILDEPTTGLHFEDIRHLLAVLRALVRKGNTVLVIEHNLDVIKV 899 Query: 898 ADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLKP 938 AD +++LGPEGG GG IL +GTPE +A +HT RFL+ Sbjct: 900 ADHVIELGPEGGDAGGHILFAGTPEELAAQ-DTHTGRFLRK 939 Score = 79.6 bits (195), Expect = 5e-13, Method: Composition-based stats. Identities = 38/122 (31%), Positives = 61/122 (50%), Gaps = 6/122 (4%) Query: 609 PEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIA 668 + + + GAR +NLK++ L +P ITG+SGSGKS+L DT++ QR+ + A Sbjct: 1 MQDCIVIRGAREHNLKNIDLDIPRERLVVITGLSGSGKSSLAFDTIYAEGQRRYLESLSA 60 Query: 669 EPAPYRDIQGLEHFD------KVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESR 722 + + D VI I+Q + + PRS T T V+ +R L+A V + Sbjct: 61 YARQFLGMLERPDVDFIDGLSPVIAIEQKTVSQNPRSTVGTVTEVYDFLRLLYARVATAY 120 Query: 723 AR 724 + Sbjct: 121 SH 122 >UniRef50_Q21RX9 Excinuclease ABC subunit A n=19 Tax=Bacteria RepID=Q21RX9_RHOFD Length = 1052 Score = 1083 bits (2800), Expect = 0.0, Method: Composition-based stats. Identities = 619/1030 (60%), Positives = 760/1030 (73%), Gaps = 91/1030 (8%) Query: 1 MDKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAY 60 + I +RGARTHNLKNI+L IPR++L+V+TGLSGSGKSSLAFDTLYAEGQRRYVESLS Y Sbjct: 24 LQNISIRGARTHNLKNIDLDIPRNQLVVITGLSGSGKSSLAFDTLYAEGQRRYVESLSTY 83 Query: 61 ARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRC 120 ARQFL LM+KPDVD IEGLSPAISIEQK+TSHNPRSTVGT+TEIHDYLRLLFAR G P C Sbjct: 84 ARQFLQLMDKPDVDLIEGLSPAISIEQKATSHNPRSTVGTVTEIHDYLRLLFARAGTPFC 143 Query: 121 PDHDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARID 180 P+HD+PL +QTVSQMVD VL+ P RLM+LAP+ +E+KGE ++ +QGY+R R++ Sbjct: 144 PEHDLPLQSQTVSQMVDAVLALPLDTRLMILAPLAREKKGEFLDVFADMQAQGYVRFRVN 203 Query: 181 GEVCDLSDPPKLELQKKHTIEVVVDRFKVRD----------------------------- 211 G+ + + P L+ +KH I+VV+DR KVR Sbjct: 204 GQAFEFDELPALKKTEKHDIDVVIDRIKVRHPPAQQASAEADSDAAPDPTPDASRSAAQA 263 Query: 212 ---DLTQRLAESFETALELSGGTAVVADMDDPKAE--------ELLFSANFACPICGYSM 260 +L QRLAESFE AL L+GG A+ ++D E +F+A FACP+C YS+ Sbjct: 264 DFENLRQRLAESFEAALRLAGGRAIAVEIDSVSRNNDGGYRPIEHIFNAKFACPVCSYSI 323 Query: 261 RELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPELSLAGGAIRGWDRRNFYYFQM 320 ELEPRLFSFN+P GACP CDGLG +FDP RV+ P LSLAGGAI+GWDRRN YYF M Sbjct: 324 AELEPRLFSFNSPVGACPACDGLGANDFFDPARVVAFPSLSLAGGAIKGWDRRNAYYFAM 383 Query: 321 LKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKENIEFKY----MNDRGDTSIRRHPFEG 376 L+SLA HY+FD+E + SL V VL+GSG+E+I+F Y G ++HPFEG Sbjct: 384 LESLAAHYQFDIEQAFESLPPTVQHAVLFGSGEEDIKFSYVMDSGTQTGKKVSKKHPFEG 443 Query: 377 VLHNMERRYKETESSAVREELAKFISNRPCASCEGTRLRREARHVYVEN----TPLPAIS 432 ++ NM+RRY ET+S+ VRE+LA++ S +PC C G+RLRREARHV + + +S Sbjct: 444 IIPNMQRRYAETDSAVVREDLARYRSTQPCPQCGGSRLRREARHVKIGEGEQARAIFELS 503 Query: 433 DMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEA 492 +++ + ++FN L + G + +IA K+++EIG RLKFL +VGLNYL+L RSAE+LSGGE+ Sbjct: 504 HLTLRESYQYFNTLSMHGAKGEIASKVVREIGLRLKFLNDVGLNYLSLDRSAESLSGGES 563 Query: 493 QRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIR 552 QRIRLASQIG+GL GVMYVLDEPSIGLHQRDN+RL+GTL HLRD+GN+V+VVEHDED +R Sbjct: 564 QRIRLASQIGSGLTGVMYVLDEPSIGLHQRDNDRLIGTLKHLRDIGNSVLVVEHDEDMMR 623 Query: 553 AADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEVPKKRVPANPE-- 610 AADH+ID+GPGAG+HGG V+A+G E + A ESLTGQY++ +I VP++R P P Sbjct: 624 AADHIIDMGPGAGLHGGRVMAQGTFEQVRANTESLTGQYLAHTLRIAVPRQRTPWLPTVQ 683 Query: 611 ------------------------------------KVLKLTGARGNNLKDVTLTLPVGL 634 + L++ GA G+NL+ V + PVGL Sbjct: 684 ARAAADKPKAHRFAPSPAALRRAEREALHLATQGKLQSLRVIGASGHNLQGVDVEFPVGL 743 Query: 635 FTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIG 694 FTC+TGVSGSGKSTL+NDTL+ R L EPA + I+G+EHFDKVI +DQSPIG Sbjct: 744 FTCVTGVSGSGKSTLVNDTLYAAVARTLY-RAHEEPAGHEAIEGIEHFDKVISVDQSPIG 802 Query: 695 RTPRSNPATYTGVFTPVRELFAGVPESRARGYTPGRFSFNV----RGGRCEACQGDGVIK 750 RTPRSNPATYTG+FTP+REL A VP +R RGY PGRFSFNV GGRCEACQGDG++K Sbjct: 803 RTPRSNPATYTGLFTPIRELMAEVPMARERGYGPGRFSFNVSQSSGGGRCEACQGDGMVK 862 Query: 751 VEMHFLPDIYVPCDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKL 810 VEMHFLPD+YVPCD C G RYNRETLE+ YKGK I ++LD+T+E A EFF AVP +ARKL Sbjct: 863 VEMHFLPDVYVPCDVCVGHRYNRETLEVLYKGKNIAQILDLTVEVAHEFFKAVPTIARKL 922 Query: 811 QTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQ 870 +TL+DVGL+YIRLGQSATTLSGGEAQRVKLA ELSKR TG+TLYILDEPTTGLHFADI Sbjct: 923 RTLLDVGLSYIRLGQSATTLSGGEAQRVKLALELSKRDTGRTLYILDEPTTGLHFADIDL 982 Query: 871 LLDVLHKLRDQGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEAS 930 LL VLH+LRD GNTIVVIEHNLDVIKTADW++D+GPEGG+GGG+++ GTPE +A AS Sbjct: 983 LLKVLHQLRDAGNTIVVIEHNLDVIKTADWLIDMGPEGGAGGGQVVGIGTPEDLAANPAS 1042 Query: 931 HTARFLKPML 940 HT +LK +L Sbjct: 1043 HTGHYLKRLL 1052 >UniRef50_A6DP81 Excinuclease ABC, A subunit n=3 Tax=Bacteria RepID=A6DP81_9BACT Length = 939 Score = 1076 bits (2784), Expect = 0.0, Method: Composition-based stats. Identities = 502/945 (53%), Positives = 655/945 (69%), Gaps = 12/945 (1%) Query: 1 MDKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAY 60 M+ I ++GAR HNLKN+++ IPR+KL+VVTGLSGSGKSSLAFDTLYAEGQRRYVESLS+Y Sbjct: 1 MEDIFIKGARHHNLKNVDVRIPRNKLVVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSSY 60 Query: 61 ARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRC 120 ARQF+ MEKP+V+ I GLSPAI+IEQ+ +PRS V T TEI+DYLRL++A VG+ C Sbjct: 61 ARQFMDQMEKPEVEQITGLSPAIAIEQRGGVGSPRSIVATSTEIYDYLRLMYAHVGKRHC 120 Query: 121 PDHDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARID 180 P + +Q+ +V S PE K++++L+P+++ RKGEH + E G+ R R+D Sbjct: 121 PQCGERVQSQSAEAIVRKAQSFPEEKKMLILSPLVEGRKGEHKEVFEKAVRDGFARVRVD 180 Query: 181 GEVCDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVADMDD- 239 GE+C L D P L+ KH +++VVDR K + RL +S ETAL GG+ + ++ Sbjct: 181 GEMCRLEDVPNLDKNFKHNVDLVVDRIKTGSK-SSRLTDSVETALTYGGGSIIFQVENEQ 239 Query: 240 PKAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPE 299 + +E S + AC C S EL+ R FSFN+P GAC C GLG Q D D ++ + Sbjct: 240 GEWDEHKLSEHLACDACNISFSELQARDFSFNSPYGACGECHGLGSVQTLDIDMIVPDKR 299 Query: 300 LSLAGGAIRGWDRR----NFYYFQMLKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKEN 355 + A W + FYY +L+S+ Y F++ + LS V+LYG+G + Sbjct: 300 KPVKD-AFPFWKKGPRRLVFYYKNLLESVGKAYDFELTTRFEDLSEKQRDVLLYGTG-KA 357 Query: 356 IEFKYMNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGTRLR 415 I Y N G PFEGV N+ RR ET S RE++ + R C SC G RL+ Sbjct: 358 IRMVYKN-AGRWYDVNKPFEGVARNITRRMNETGSDRQREKILSLMVRRECGSCHGDRLK 416 Query: 416 REARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNVGL 475 E+ V V++ P+ MSI A EF NL IA ++ +EI RL FL VGL Sbjct: 417 PESLAVTVKDMPINHFLRMSIADAAEFIQNLDFNETEKVIAGEVSREIDSRLGFLNAVGL 476 Query: 476 NYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLR 535 NYL L+R + +LSGGEAQRIRLA+Q+GAGLVGV+Y+LDEPSIGLHQRDN+RLL TL HLR Sbjct: 477 NYLNLNRESSSLSGGEAQRIRLATQLGAGLVGVLYILDEPSIGLHQRDNDRLLATLEHLR 536 Query: 536 DLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGK 595 LGNTV+VVEHD D I AD++ID+GP AG GGE+V GP + IM ++LTGQYMSGK Sbjct: 537 GLGNTVVVVEHDTDTILRADYLIDMGPMAGRLGGEIVFAGPPKEIMKA-DTLTGQYMSGK 595 Query: 596 RKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLF 655 ++I +P KR N + +K+ A NNL+ V +++P+G F C+TGVSGSGKSTL+++ L Sbjct: 596 KEIAIPAKREKGNGKS-IKIKAAAENNLQKVNVSVPLGKFVCVTGVSGSGKSTLVHEILK 654 Query: 656 PIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELF 715 + L G P R ++GLE DK I I QSPIG+TPRSNPATYTG F +R L+ Sbjct: 655 KSINKHL-GIGRERPGKVRSVEGLEEIDKQIVITQSPIGKTPRSNPATYTGAFDQIRTLY 713 Query: 716 AGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRET 775 A P+++AR Y PGRFSFNV+GGRCE C+GDG K+EM+FLPD++V C+ C+G+RYN ET Sbjct: 714 ASTPDAKARAYKPGRFSFNVKGGRCEECKGDGYRKIEMNFLPDVFVECEVCRGRRYNTET 773 Query: 776 LEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEA 835 L + YKG++I +VL+MTI+EA EFFD VP L + L TL +VGL Y+ +GQ+ATTLSGGEA Sbjct: 774 LSVLYKGRSIADVLEMTIDEAYEFFDKVPKLKKILGTLEEVGLGYLHMGQAATTLSGGEA 833 Query: 836 QRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVI 895 QRVKLA EL + G T+YILDEPTTGLH ADI +LL VLH+LRD GN+++VIEHNLDVI Sbjct: 834 QRVKLASELCRIPRGHTMYILDEPTTGLHIADIDRLLQVLHRLRDAGNSLIVIEHNLDVI 893 Query: 896 KTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLKPML 940 KTADWI+D+GPEGG+GGG+++VSGTPE VA+C AS T ++LKP+L Sbjct: 894 KTADWIIDMGPEGGAGGGQVMVSGTPEKVAKCAASFTGQYLKPIL 938 >UniRef50_Q1MP46 Excinuclease ABC, A subunit n=2 Tax=Bacteria RepID=Q1MP46_LAWIP Length = 957 Score = 1075 bits (2780), Expect = 0.0, Method: Composition-based stats. Identities = 455/942 (48%), Positives = 626/942 (66%), Gaps = 12/942 (1%) Query: 2 DKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYA 61 I + GAR HNLKNI + IPR+KL+V+ G SGSGKS+LAFD +YAEGQRRY+ESLS YA Sbjct: 3 KCIHIEGARQHNLKNITIDIPREKLVVICGPSGSGKSTLAFDIVYAEGQRRYIESLSTYA 62 Query: 62 RQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCP 121 RQFL M+KPD+D IEGLSPAIS+EQ++T NPRSTVGT TEI+D+LR+ +AR+G+ C Sbjct: 63 RQFLPQMDKPDIDKIEGLSPAISLEQQTTGRNPRSTVGTTTEIYDFLRVFYARLGKMYCT 122 Query: 122 DHDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARIDG 181 P+ A++V +++ ++L+ PEG +++LL+P+++ +KG H + L+ L + G++R RIDG Sbjct: 123 GCSKPIEARSVDEIIADILALPEGTKIILLSPLVELQKGTHIEKLKKLKADGFVRVRIDG 182 Query: 182 EVCDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVADM---D 238 + + + P L+ KKHTIE+VVDR +++D+ RLA+S E AL GG ++ ++ D Sbjct: 183 ILYTIDEAPSLDKNKKHTIELVVDRLIIKNDIRGRLADSVELALRYGGGHVIIHEISISD 242 Query: 239 DPKAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNP 298 + K + + + C C S L P+ FSFN+P GACP C GLG +YF+P + N Sbjct: 243 EKKGIDTIHATESVCTSCRISFPTLTPQFFSFNSPQGACPRCSGLGTIEYFEPLLIAPNR 302 Query: 299 ELSLAGGAIRGWDRRN--FYYFQMLKSLADHYKFDVEAPWGSLSANVHKVVLYGS--GKE 354 LSL AI W Y LK L Y F++ P +A ++ YG Sbjct: 303 GLSLNTKAILPWANPKIFHRYESSLKELGRKYGFNLSTPLSEFNAEALDILFYGEQINDT 362 Query: 355 NIEFKYMNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGTRL 414 + +I + G++ +E+ + R+ L++++ N C C G RL Sbjct: 363 PSQLSKSKKTVQKTIDNQRWSGIIPILEQSLQ--YGDMWRDILSRYLQNMDCPVCHGARL 420 Query: 415 RREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNVG 474 R EA V ++ + + + + + + + +G+ A IAE +LKE+ RLKF++NVG Sbjct: 421 RTEALAVQIQGVSIQELCTIPVSKTLNWLQQVIFSGRHAIIAEPLLKELIHRLKFMINVG 480 Query: 475 LNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHL 534 L+YL+L R+ TLSGGEAQRIRLASQ+G+GLVGV YVLDEPSIGLH RDNERL+ TL L Sbjct: 481 LDYLSLGRTMTTLSGGEAQRIRLASQLGSGLVGVTYVLDEPSIGLHPRDNERLVSTLRSL 540 Query: 535 RDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSG 594 + GNTV+VVEHDE IR +D +I++GPG+G+HGGE V +G ++ +LT +YM G Sbjct: 541 QKRGNTVLVVEHDEATIRESDMIIELGPGSGLHGGEKVFQGSFRQLINESNTLTAKYMRG 600 Query: 595 KRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTL 654 I +P KR + L L G +NLK++T + P+G TC+TGVSGSGKS+L+ DTL Sbjct: 601 DLTIPIPDKRRQP--KNYLTLQGITTHNLKNITCSFPLGTLTCVTGVSGSGKSSLVVDTL 658 Query: 655 FPIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVREL 714 + +G + +P IQG+E ++ I IDQ+PIG+TPRSNPATYT +F +R + Sbjct: 659 YKHLA-LAHGIRVDQPGIIHGIQGIEKVERTISIDQTPIGKTPRSNPATYTKIFDEIRNI 717 Query: 715 FAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRE 774 FA P+++ RGY PGRFSFNV GGRCE C+GDG ++VEMHFLPDIYV CD C GKRYN E Sbjct: 718 FAMTPDAKKRGYQPGRFSFNVPGGRCETCKGDGQLRVEMHFLPDIYVTCDICNGKRYNHE 777 Query: 775 TLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGE 834 TLE++Y+G I EVL + + EAR+FF P L RKL L +VGL Y++LGQ ATTLSGGE Sbjct: 778 TLEVRYRGLNISEVLGLAVHEARKFFTNYPILERKLAILEEVGLDYLQLGQPATTLSGGE 837 Query: 835 AQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDV 894 AQR+K++REL KR TLYILDEPTTGLH ++ +L+ VL +L D+ T+VVIEHN DV Sbjct: 838 AQRIKISRELGKRSLPGTLYILDEPTTGLHMHEVGKLITVLQQLVDKKATVVVIEHNKDV 897 Query: 895 IKTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFL 936 I +D+++DLGP GG GG I+ SGTPE + + S T +FL Sbjct: 898 ILASDYVIDLGPGGGENGGHIVASGTPEEIMQDPQSITGKFL 939 Score = 167 bits (424), Expect = 1e-39, Method: Composition-based stats. Identities = 72/197 (36%), Positives = 110/197 (55%), Gaps = 15/197 (7%) Query: 403 NRPCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKE 462 C C G R E V + + +++ A +FF N + Sbjct: 763 YVTCDICNGKRYNHETLEVRYRGLNISEVLGLAVHEARKFFTNYPI-------------- 808 Query: 463 IGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIG-AGLVGVMYVLDEPSIGLHQ 521 + +L L VGL+YL L + A TLSGGEAQRI+++ ++G L G +Y+LDEP+ GLH Sbjct: 809 LERKLAILEEVGLDYLQLGQPATTLSGGEAQRIKISRELGKRSLPGTLYILDEPTTGLHM 868 Query: 522 RDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIM 581 + +L+ L L D TV+V+EH++D I A+D+VID+GPG G +GG +VA G E IM Sbjct: 869 HEVGKLITVLQQLVDKKATVVVIEHNKDVILASDYVIDLGPGGGENGGHIVASGTPEEIM 928 Query: 582 AVPESLTGQYMSGKRKI 598 P+S+TG+++ + + Sbjct: 929 QDPQSITGKFLLEEVNV 945 Score = 160 bits (405), Expect = 2e-37, Method: Composition-based stats. Identities = 64/189 (33%), Positives = 107/189 (56%), Gaps = 15/189 (7%) Query: 763 CDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAV--------------PALAR 808 C C G R E L ++ +G +I E+ + + + + V L Sbjct: 412 CPVCHGARLRTEALAVQIQGVSIQELCTIPVSKTLNWLQQVIFSGRHAIIAEPLLKELIH 471 Query: 809 KLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADI 868 +L+ +++VGL Y+ LG++ TTLSGGEAQR++LA +L G T Y+LDEP+ GLH D Sbjct: 472 RLKFMINVGLDYLSLGRTMTTLSGGEAQRIRLASQLGSGLVGVT-YVLDEPSIGLHPRDN 530 Query: 869 QQLLDVLHKLRDQGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECE 928 ++L+ L L+ +GNT++V+EH+ I+ +D I++LGP G GGE + G+ + Sbjct: 531 ERLVSTLRSLQKRGNTVLVVEHDEATIRESDMIIELGPGSGLHGGEKVFQGSFRQLINES 590 Query: 929 ASHTARFLK 937 + TA++++ Sbjct: 591 NTLTAKYMR 599 Score = 82.3 bits (202), Expect = 8e-14, Method: Composition-based stats. Identities = 35/117 (29%), Positives = 55/117 (47%), Gaps = 6/117 (5%) Query: 609 PEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIA 668 K + + GAR +NLK++T+ +P I G SGSGKSTL D ++ QR+ + Sbjct: 1 MNKCIHIEGARQHNLKNITIDIPREKLVVICGPSGSGKSTLAFDIVYAEGQRRYIESLST 60 Query: 669 EPAPYRDIQGLEHFDKV------IDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVP 719 + DK+ I ++Q GR PRS T T ++ +R +A + Sbjct: 61 YARQFLPQMDKPDIDKIEGLSPAISLEQQTTGRNPRSTVGTTTEIYDFLRVFYARLG 117 >UniRef50_D1PT12 Excision endonuclease subunit UvrA n=3 Tax=Bacteria RepID=D1PT12_9BACT Length = 1003 Score = 1059 bits (2739), Expect = 0.0, Method: Composition-based stats. Identities = 469/935 (50%), Positives = 657/935 (70%), Gaps = 10/935 (1%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 63 I+V GAR HNLK I++ IPR+ L V+TGLSGSGKSSLAFDT++AEGQRRY+E+ SAYAR Sbjct: 75 IDVLGARVHNLKGIDVSIPRNSLTVITGLSGSGKSSLAFDTIFAEGQRRYIETFSAYARN 134 Query: 64 FLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCPDH 123 FL ME+PDV+ I GLSP ISIEQK+T+ NPRSTVGT TEI+DYLRLL+AR G Sbjct: 135 FLGNMERPDVEKITGLSPVISIEQKTTNKNPRSTVGTTTEIYDYLRLLYARAGTAYSYMS 194 Query: 124 DVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARIDGEV 183 + T +++D +LS +G + +LAP++++RKG + + +++ +GY+ R+DGEV Sbjct: 195 GEKMVKYTEEKVIDMILSDYDGHAIYILAPLVRQRKGHYRELFDSMRRKGYLYIRVDGEV 254 Query: 184 CDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVADMDDPKAE 243 ++ K++ K H IEVV+D+ KV+ +RL S +TA++ G VVA MD Sbjct: 255 KEIVRGMKVDRYKNHNIEVVIDKLKVQGKDDERLKHSVQTAMKQGDG--VVAVMDKESGA 312 Query: 244 ELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPELSLA 303 FS P+ G S E P +FSFN+P GACP C GLG D +VI N +LS+ Sbjct: 313 VRNFSKRLMDPVTGLSYGEPAPNIFSFNSPEGACPHCKGLGYVSVIDMKKVIPNDKLSIR 372 Query: 304 GGAIRGWDR-RNFYYFQMLKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKENIEFKYMN 362 GAI + +N F L+++ ++Y+ D++ P+ + + ++ G+ + Sbjct: 373 EGAIAPLGKYKNQMIFWQLEAILNNYECDLKTPFKDIPQDAVDEIMNGTLETV--RIPKE 430 Query: 363 DRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGTRLRREARHVY 422 +S F+GV+ + + +S+A ++ A+F+++ C C+G RL+RE+ Sbjct: 431 VVHTSSDYFVTFDGVVKYLRTVMEADDSAASQKWAAQFLADAVCPECKGMRLKRESLSYR 490 Query: 423 VENTPLPAISDMSIGHAMEFFNNLK--LAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTL 480 + + + +S++ + E+ +++ L Q+ KIA +I+KE+ R+ FL+ VGL+YL L Sbjct: 491 IGDENISEVSNLDMTDLREWLAHVEEHLGKQQQKIAHEIVKELCTRVDFLLEVGLDYLAL 550 Query: 481 SRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNT 540 +R + TLSGGE+QRIRLA+QIG+ LV V+Y+LDEPSIGLHQRDN RL+ +L LRDLGNT Sbjct: 551 NRQSGTLSGGESQRIRLATQIGSQLVNVLYILDEPSIGLHQRDNHRLISSLKELRDLGNT 610 Query: 541 VIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEV 600 VIVVEHDED +RAAD +IDIGP AG GGEVV +G E ++ +++T QY++G+R+IE+ Sbjct: 611 VIVVEHDEDMMRAADWIIDIGPRAGRKGGEVVFQGTPEEMLKT-QTITAQYLNGERQIEI 669 Query: 601 PKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQR 660 P+ R N + +++ GA GNNLK++ + P+G +TGVSGSGKSTL+N+TL PI + Sbjct: 670 PEHRRKGNGKS-IRIIGAHGNNLKNINVEFPLGKLIVVTGVSGSGKSTLVNETLQPILSQ 728 Query: 661 QLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPE 720 ++ P PY +G+++ DKV+D+DQSPIGRTPRSNPATYTGVFT +R LF +PE Sbjct: 729 HFY-RSLKNPMPYEKAEGIDNIDKVVDVDQSPIGRTPRSNPATYTGVFTDIRNLFVNLPE 787 Query: 721 SRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKY 780 ++ RGY PGRFSFNV+GGRCE C G+G +EM+FLP++ VPC+ C GKRYNRETLE+++ Sbjct: 788 AKIRGYKPGRFSFNVKGGRCETCGGNGYKTIEMNFLPNVMVPCEVCHGKRYNRETLEVRF 847 Query: 781 KGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKL 840 KGK+I +VLDMTI +A EFF+ VP + K++TL DVGL Y++LGQS+TTLSGGE+QRVKL Sbjct: 848 KGKSIADVLDMTINQAVEFFENVPTILPKIKTLQDVGLGYVKLGQSSTTLSGGESQRVKL 907 Query: 841 ARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADW 900 A EL+KR TG+TLYILDEPTTGLHF DI+ L+DVL KL D+GNT+++IEHNLDVI+ AD Sbjct: 908 ATELAKRDTGKTLYILDEPTTGLHFEDIRILMDVLQKLVDRGNTVIIIEHNLDVIRLADH 967 Query: 901 IVDLGPEGGSGGGEILVSGTPETVAECEASHTARF 935 I+D+GP GG GGGE+L +GTPE VA+ + T ++ Sbjct: 968 IIDIGPLGGRGGGEVLTTGTPEEVAKSKKGFTPKY 1002 Score = 108 bits (271), Expect = 9e-22, Method: Composition-based stats. Identities = 39/122 (31%), Positives = 59/122 (48%), Gaps = 7/122 (5%) Query: 2 DKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYA 61 I + GA +NLKNIN+ P KLIVVTG+SGSGKS+L +TL + + Sbjct: 679 KSIRIIGAHGNNLKNINVEFPLGKLIVVTGVSGSGKSTLVNETLQPILSQ-------HFY 731 Query: 62 RQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCP 121 R + M + I+ + + ++Q PRS T T + +R LF + E + Sbjct: 732 RSLKNPMPYEKAEGIDNIDKVVDVDQSPIGRTPRSNPATYTGVFTDIRNLFVNLPEAKIR 791 Query: 122 DH 123 + Sbjct: 792 GY 793 Score = 85.8 bits (211), Expect = 6e-15, Method: Composition-based stats. Identities = 38/134 (28%), Positives = 58/134 (43%), Gaps = 6/134 (4%) Query: 594 GKRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDT 653 R + + GAR +NLK + +++P T ITG+SGSGKS+L DT Sbjct: 56 AGSTPTSAPSRGAGEDGSWIDVLGARVHNLKGIDVSIPRNSLTVITGLSGSGKSSLAFDT 115 Query: 654 LFPIAQRQLNGATIAEPAPYRDIQGLEHFDK------VIDIDQSPIGRTPRSNPATYTGV 707 +F QR+ A + +K VI I+Q + PRS T T + Sbjct: 116 IFAEGQRRYIETFSAYARNFLGNMERPDVEKITGLSPVISIEQKTTNKNPRSTVGTTTEI 175 Query: 708 FTPVRELFAGVPES 721 + +R L+A + Sbjct: 176 YDYLRLLYARAGTA 189 >UniRef50_Q30YG3 Excinuclease ABC subunit A n=3 Tax=Bacteria RepID=Q30YG3_DESDG Length = 926 Score = 1058 bits (2737), Expect = 0.0, Method: Composition-based stats. Identities = 469/936 (50%), Positives = 629/936 (67%), Gaps = 28/936 (2%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 63 I + GAR HNLKN+ L IPRD+L+VV G SGSGKS+LAFD +YAEGQRRYVESLSAYARQ Sbjct: 6 IHIEGARQHNLKNLTLDIPRDELVVVCGPSGSGKSTLAFDLVYAEGQRRYVESLSAYARQ 65 Query: 64 FLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCPDH 123 FL M+KPDVD IEGLSPAIS+EQ+STS NPRSTVGT+TE++D+LR+ +AR+G CP Sbjct: 66 FLPQMDKPDVDKIEGLSPAISLEQQSTSRNPRSTVGTVTEVYDFLRVFYARLGMMYCPKC 125 Query: 124 DVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARIDGEV 183 P+AA+ +++ ++LS +G + M++AP+++ +KG H L+ L +QG++R R++GEV Sbjct: 126 GKPIAARAADEIIADILSMEQGTKFMVMAPLVEHQKGTHADRLKRLKAQGFVRIRLNGEV 185 Query: 184 CDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVADMDDPKAE 243 L + P LE KKH+I++VVDR ++D + RLA+S E AL G +V+ P Sbjct: 186 MTLDEVPALEKNKKHSIDLVVDRLVLKDGIRGRLADSVELALRFGEGRLIVSI---PGGA 242 Query: 244 ELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPELSLA 303 E + S CP C S+ L P+LFSFN+P GACP C G+G YF+P+ + N LSL Sbjct: 243 EQVHSTESVCPTCKLSLPPLSPQLFSFNSPQGACPRCSGIGSIDYFEPNLLAPNKGLSLV 302 Query: 304 GGAIRGWDRRN--FYYFQMLKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKENIEFKYM 361 G + W Y L++L F + P+ S + +G Sbjct: 303 SGGLLPWKNPKVFERYKPALEALGKELGFAADTPFREYSEKAWNALFHGE---------- 352 Query: 362 NDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGTRLRREARHV 421 + + GV+ +ER + R+EL+++ + PC +C+G RL+ EA V Sbjct: 353 --------KETGWPGVVLLLERGMQLGSQ--WRDELSRYRQSHPCPACDGARLKPEALAV 402 Query: 422 YVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTLS 481 V++ + +SI A+E+ +A IAE +LKE+ RL F+ NVGL+Y++L Sbjct: 403 RVDDLNISQFCSLSITRALEWLRGRDFRQSQAVIAEPLLKELTHRLGFMENVGLDYISLG 462 Query: 482 RSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTV 541 R+ TLSGGEAQRIRLASQ+G+GLVGV YVLDEPSIGLH +DNERL+ TL L+ GNTV Sbjct: 463 RNMSTLSGGEAQRIRLASQLGSGLVGVTYVLDEPSIGLHPKDNERLIRTLRSLQKRGNTV 522 Query: 542 IVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEVP 601 +VVEHDE I AD V+++GPG+G+ GGE+V G ++++++ +SLT +Y+ G+ I +P Sbjct: 523 LVVEHDEATILEADTVVELGPGSGMLGGEIVFNGSVKSLLSDSDSLTARYLRGEMTIPLP 582 Query: 602 KKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQ 661 +KR + V L G NNL+D+ +P+G TC+TG SGSGKS+L+ D+L+ Sbjct: 583 EKRRQGSGSIV--LRGVTTNNLQDIDCEIPLGALTCVTGPSGSGKSSLVVDSLYKHIALH 640 Query: 662 LNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPES 721 + + P R I GLE+ ++++ IDQ+PIGRTPRSNPATYT +F +R +FA P++ Sbjct: 641 QSIKVDS-PGQIRGIDGLENIERLVAIDQTPIGRTPRSNPATYTKIFDEIRNIFAMTPDA 699 Query: 722 RARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKYK 781 R RGY PGRFSFNVRGGRCEAC GDG I+VEMHFLPDIYV CD C GKRYN ETLE++YK Sbjct: 700 RKRGYKPGRFSFNVRGGRCEACGGDGQIRVEMHFLPDIYVTCDVCGGKRYNHETLEVRYK 759 Query: 782 GKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLA 841 G I +VL MT+ +A+ FF+ PAL R+L L DVGL Y+RLGQ ATTLSGGEAQR+K++ Sbjct: 760 GMNIADVLGMTVRQAKAFFENYPALERRLAVLEDVGLEYLRLGQPATTLSGGEAQRIKIS 819 Query: 842 RELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADWI 901 REL KR TLYILDEPTTGLH ++ +L+ VLH+L D+G T+VVIEHN DVI AD + Sbjct: 820 RELGKRSLPGTLYILDEPTTGLHMHEVGKLIRVLHQLVDRGATVVVIEHNTDVIMAADTV 879 Query: 902 VDLGPEGGSGGGEILVSGTPETVAECEASHTARFLK 937 +DLGP GG GG I+ SGTPE + AS T FLK Sbjct: 880 IDLGPGGGEYGGRIVSSGTPEEIMADPASVTGSFLK 915 Score = 175 bits (445), Expect = 5e-42, Method: Composition-based stats. Identities = 77/203 (37%), Positives = 107/203 (52%), Gaps = 15/203 (7%) Query: 403 NRPCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKE 462 C C G R E V + + + M++ A FF N Sbjct: 738 YVTCDVCGGKRYNHETLEVRYKGMNIADVLGMTVRQAKAFFENYP--------------A 783 Query: 463 IGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIG-AGLVGVMYVLDEPSIGLHQ 521 + RL L +VGL YL L + A TLSGGEAQRI+++ ++G L G +Y+LDEP+ GLH Sbjct: 784 LERRLAVLEDVGLEYLRLGQPATTLSGGEAQRIKISRELGKRSLPGTLYILDEPTTGLHM 843 Query: 522 RDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIM 581 + +L+ L L D G TV+V+EH+ D I AAD VID+GPG G +GG +V+ G E IM Sbjct: 844 HEVGKLIRVLHQLVDRGATVVVIEHNTDVIMAADTVIDLGPGGGEYGGRIVSSGTPEEIM 903 Query: 582 AVPESLTGQYMSGKRKIEVPKKR 604 A P S+TG ++ + R Sbjct: 904 ADPASVTGSFLKHEAVAVKAAGR 926 Score = 100 bits (248), Expect = 3e-19, Method: Composition-based stats. Identities = 41/112 (36%), Positives = 60/112 (53%), Gaps = 9/112 (8%) Query: 3 KIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAE-GQRRYVESLSAYA 61 I +RG T+NL++I+ IP L VTG SGSGKSSL D+LY + ++ S Sbjct: 591 SIVLRGVTTNNLQDIDCEIPLGALTCVTGPSGSGKSSLVVDSLYKHIALHQSIKVDSPGQ 650 Query: 62 RQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFA 113 + + +E +IE L ++I+Q PRS T T+I D +R +FA Sbjct: 651 IRGIDGLE-----NIERL---VAIDQTPIGRTPRSNPATYTKIFDEIRNIFA 694 Score = 80.0 bits (196), Expect = 4e-13, Method: Composition-based stats. Identities = 35/117 (29%), Positives = 55/117 (47%), Gaps = 6/117 (5%) Query: 610 EKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAE 669 + + + GAR +NLK++TL +P + G SGSGKSTL D ++ QR+ + A Sbjct: 3 KPCIHIEGARQHNLKNLTLDIPRDELVVVCGPSGSGKSTLAFDLVYAEGQRRYVESLSAY 62 Query: 670 PAPYRDIQGLEHFDKV------IDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPE 720 + DK+ I ++Q R PRS T T V+ +R +A + Sbjct: 63 ARQFLPQMDKPDVDKIEGLSPAISLEQQSTSRNPRSTVGTVTEVYDFLRVFYARLGM 119 >UniRef50_Q2SR90 Excinuclease ABC, A subunit n=5 Tax=Bacteria RepID=Q2SR90_MYCCT Length = 946 Score = 1055 bits (2728), Expect = 0.0, Method: Composition-based stats. Identities = 460/945 (48%), Positives = 659/945 (69%), Gaps = 11/945 (1%) Query: 2 DKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYA 61 DKI ++GAR HNLKNI+L +P++KLIV TGLSGSGKSSLAF T+Y EG+RRY+ESLSAYA Sbjct: 4 DKIIIKGAREHNLKNIDLELPKNKLIVFTGLSGSGKSSLAFSTIYQEGRRRYIESLSAYA 63 Query: 62 RQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCP 121 RQFL EKPDVD IEGLSPAISI+QK+TSHNPRSTVGT+TEI+DYLRLL+AR+G+P C Sbjct: 64 RQFLGGNEKPDVDSIEGLSPAISIDQKTTSHNPRSTVGTVTEIYDYLRLLYARIGQPYCI 123 Query: 122 DHDVPLAAQTVSQMVDNVL-SQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARID 180 ++ + A ++ ++V+N+ S +G+++ +L+P+I+++KG H LE L + G+IR +D Sbjct: 124 NNHGQIKAVSIKEIVENIKQSTSDGEQIHILSPVIRDKKGTHIDILEKLRNDGFIRVIVD 183 Query: 181 GEVCDLSDPPKLELQKKHTIEVVVDRFKV--RDDLTQRLAESFETALELSGGTAVVADMD 238 ++ L D LE ++H I++VVDR D++ R+ + E L+ S +A + Sbjct: 184 DQLRMLDDQINLEKNQRHNIDIVVDRIIYHNNDEINSRIFTAVEMGLKYSNNLIKIAFPN 243 Query: 239 DPKAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNP 298 K +E LFS +F+C +C + + ELEPRLFSFN P GAC C+GLGV D + ++ + Sbjct: 244 SNK-QEKLFSTSFSCKVCDFVVPELEPRLFSFNAPLGACELCNGLGVSLEPDINLILPDL 302 Query: 299 ELSLAGGAIRGWDR---RNFYYFQMLKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKEN 355 +LS+ G + + +Q + L D+Y D+ P L+ ++L+GS +E Sbjct: 303 KLSINQGGVVYYKNFMHTKNIEWQKFRILCDYYYIDLNTPLKDLTQKQRDIILWGSDRE- 361 Query: 356 IEFKYMNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGTRLR 415 I+ K + + + + EG ++RRY E++S R+ +KF+S++ C C+G+RL Sbjct: 362 IDIKIVTENNNKYEKYDFIEGNAALIKRRYFESKSEEARKWYSKFMSSKICKQCKGSRLN 421 Query: 416 REARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNVGL 475 A V + + ++MSI ++F N+ L +A IA+ +L EI R FL VGL Sbjct: 422 DIALSVKINEKSIFDYTNMSISEQLDFLLNIDLTPTQAMIAKLVLDEIISRTNFLNEVGL 481 Query: 476 NYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLR 535 YL LSR+A TLSGGE+QRIRLA QIG+ L G++YVLDEPSIGLHQ+DN++L+ TL HLR Sbjct: 482 GYLNLSRTATTLSGGESQRIRLAKQIGSQLTGILYVLDEPSIGLHQKDNDKLIKTLKHLR 541 Query: 536 DLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGK 595 DLGNT+IVVEHDED ++++D ++DIGP AG +GGE+ G + I+ +++TG+Y+S K Sbjct: 542 DLGNTLIVVEHDEDTMKSSDWIVDIGPRAGEYGGEITFSGTYQDILKS-DTITGRYLSRK 600 Query: 596 RKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLF 655 I VPK R N +K +++ GA NNLK++ +T+P+ F ITGVSGSGKSTL+ D ++ Sbjct: 601 EGIVVPKIRRGGNGKK-IEIIGASENNLKNINVTIPLNKFITITGVSGSGKSTLLEDIVY 659 Query: 656 PIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELF 715 L+ + ++I+G+E+ +K I I Q PIG+TPRSNPATYT VF +R+LF Sbjct: 660 KGIHNNLSKEYLPI-GKVKEIKGIENINKAIYISQEPIGKTPRSNPATYTSVFDDIRDLF 718 Query: 716 AGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRET 775 +PE++ RGY GRFSFNV GGRCE CQGDGVI + M F+P + V C+ C+GKRYN ET Sbjct: 719 TNLPEAKIRGYKKGRFSFNVHGGRCEHCQGDGVITISMQFMPSVEVVCEICEGKRYNDET 778 Query: 776 LEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEA 835 L +KYK K+I +VL+M++ EA FF+ +P + +KL+T+++VGL YI+LGQ+ATTLSGGE+ Sbjct: 779 LTVKYKNKSIADVLNMSVSEAYVFFENIPQIKQKLETILEVGLGYIKLGQNATTLSGGES 838 Query: 836 QRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVI 895 QR+KL+ L K+ TG T+++LDEPTTGLH D+++L+ VL+KL D GNT++ IEHNLD I Sbjct: 839 QRIKLSTYLLKKQTGNTMFLLDEPTTGLHVDDVKRLIGVLNKLVDLGNTVLCIEHNLDFI 898 Query: 896 KTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLKPML 940 K +D I+DLGP+GG GG+++V+GTPE + S+TA++LK + Sbjct: 899 KVSDHIIDLGPDGGEYGGQVVVTGTPEQIINHPTSYTAKYLKDYI 943 >UniRef50_D2QY36 Excinuclease ABC, A subunit n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2QY36_9PLAN Length = 2373 Score = 1049 bits (2712), Expect = 0.0, Method: Composition-based stats. Identities = 510/1001 (50%), Positives = 684/1001 (68%), Gaps = 66/1001 (6%) Query: 3 KIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYAR 62 I ++GAR HNL++++LV+PR++LI +TG+SGSGKSSLAFDTL+AEGQRRYVESLS+YAR Sbjct: 5 DIVIQGAREHNLRDVSLVLPRNQLICLTGVSGSGKSSLAFDTLFAEGQRRYVESLSSYAR 64 Query: 63 QFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCPD 122 QFL M KPDVD I GLSP+ISI QKST +NPRSTVGTITEIHDYLR+L+AR+G+ CP Sbjct: 65 QFLGQMPKPDVDFIGGLSPSISISQKSTGNNPRSTVGTITEIHDYLRVLYARIGQGFCPK 124 Query: 123 HDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARIDGE 182 + AQ+ Q++++++S G +L +LAP+I+++KGE+ E+L QG++RAR+DG Sbjct: 125 CGRAITAQSREQIIESIISLESGTKLQILAPLIRQQKGEYRDLFEDLLKQGFVRARVDGN 184 Query: 183 VCDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVADMDDPKA 242 V LSD L+ Q +H IEVV+DR +R D+ RLAE+ E AL++ G +VA +D Sbjct: 185 VVQLSDKLSLDRQMRHDIEVVIDRLVMRSDIRPRLAEAVELALKMGQGNLIVAIENDSAV 244 Query: 243 E-------------------------------------------ELLFSANFACPICGYS 259 + +LL+S+++AC C S Sbjct: 245 KPSAEFTEALRTAQSQETDSDSEESEEAETKTTKKRRGGSARPGDLLYSSSYACTPCKLS 304 Query: 260 MRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPELSLAGGAIRG---WDRRNFY 316 P+LFSFN+P G CP CDGLGV FDP ++ +P L+ GAI W + Sbjct: 305 FEPPSPQLFSFNSPQGMCPQCDGLGVMYSFDPVLLVPSPNLNFKEGAIEPVGSWHDLGRW 364 Query: 317 YFQMLKSLA----DHYKFD----VEAPWGSLSANVHKVVLYGSGKENIEFKYMNDRGDTS 368 + + +A + D +E PW SL+A++ K+ L+G+G E+I + + + Sbjct: 365 RRHIFQGVADTVERKRELDAGTMLETPWKSLAADLKKLWLWGTGDEHITYTWRGGKEP-M 423 Query: 369 IRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGTRLRREARHVYV----- 423 + FEGV+ + +Y+ ++S + + L +++S C +C+G RL +ARHV + Sbjct: 424 MYGGKFEGVIPELTAKYRGSKSKSQIKGLERYMSMVSCPACKGERLIEQARHVRLTSTAP 483 Query: 424 ----ENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLT 479 + LP +S++++ A +FF +L L + IA ++LKEI RL FL++VGL+YL+ Sbjct: 484 GYVGKQLTLPEVSNLAVSEASKFFASLALDQTQTTIAAEVLKEIRTRLGFLIDVGLDYLS 543 Query: 480 LSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGN 539 L R+A TLSGGE+QRIRLA QIG+GLVGV+Y+LDEPSIGLH RDN+RLL TL LRD+GN Sbjct: 544 LDRTAPTLSGGESQRIRLAGQIGSGLVGVLYILDEPSIGLHPRDNDRLLSTLHRLRDMGN 603 Query: 540 TVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIE 599 TVIVVEHDED +RAAD +ID GPG GV GGEVV GP ++ SLTGQY+SG+++IE Sbjct: 604 TVIVVEHDEDTMRAADTIIDFGPGPGVRGGEVVVHGPPSEVIKNKRSLTGQYLSGEKQIE 663 Query: 600 VPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQ 659 VP KR A EK L+L G NNLK+VT +P+G C+TGVSGSGKS+L+ D L Sbjct: 664 VPAKRR-AVGEKALRLVGCTHNNLKNVTAEIPLGGLICVTGVSGSGKSSLVTDILVEALH 722 Query: 660 RQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVP 719 R LN P + I+GLEH DK+I IDQ+PIGRTPRSNP TY +F +R+LF +P Sbjct: 723 RDLNFGE-GNPGAHEKIEGLEHLDKLISIDQTPIGRTPRSNPGTYIKLFDDIRDLFTQLP 781 Query: 720 ESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIK 779 E++ RGY PGRFSFNV GGRCEAC+G+G K+EM FL D++V C C+GKR+NRETL++K Sbjct: 782 EAKRRGYKPGRFSFNVEGGRCEACEGNGSNKLEMDFLADVWVTCPVCEGKRFNRETLQVK 841 Query: 780 YKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVK 839 +K K+I +VL+M +++A E F+ VP + KLQTL DVGL YI++GQ++ TLSGGEAQR+K Sbjct: 842 FKDKSIADVLEMDVQQALELFENVPHVRHKLQTLHDVGLDYIKIGQASPTLSGGEAQRIK 901 Query: 840 LARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTAD 899 LAREL K+ TG+TLY+LDEPTTGLHFADI LL VLH D GNT++V+EHNLDVIKTAD Sbjct: 902 LARELVKKSTGKTLYLLDEPTTGLHFADIHLLLGVLHNFADAGNTVLVVEHNLDVIKTAD 961 Query: 900 WIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLKPML 940 WI+D+GPEGG+ GGEIL GTPE +A+ SHT R L +L Sbjct: 962 WIIDMGPEGGAAGGEILAVGTPEEIAKNTRSHTGRALAKIL 1002 Score = 978 bits (2529), Expect = 0.0, Method: Composition-based stats. Identities = 449/1001 (44%), Positives = 633/1001 (63%), Gaps = 69/1001 (6%) Query: 2 DKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYA 61 +I VRGAR HNLK +++ + RDK+ V G SGSGKSSLA DT+YAEGQRRYVESLSAYA Sbjct: 1034 KQITVRGARQHNLKGVDVTVERDKMTVFCGPSGSGKSSLAMDTIYAEGQRRYVESLSAYA 1093 Query: 62 RQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCP 121 RQF++ M+KP V+HI+GLSPAI+IEQK+ H PRSTVGT+TE++DY R+L AR+G+ CP Sbjct: 1094 RQFVAQMQKPLVEHIDGLSPAIAIEQKNLGHTPRSTVGTVTEVYDYFRILMARLGQAYCP 1153 Query: 122 DHDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARIDG 181 D+P+ QT Q+VD++L++ EG +L L+API + + E+L S GY R R+DG Sbjct: 1154 ACDIPVGTQTADQVVDSILTELEGAKLYLMAPIEIDAGQTYASLFEHLRSIGYSRVRVDG 1213 Query: 182 EVCDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVADMD--- 238 L P ++ ++KHT+EVV+DR V RLA S E AL L G VA +D Sbjct: 1214 VTSSLDAAPTIDRRRKHTVEVVIDRVNVNPAQRSRLAGSIENALALGKGVLHVAKVDESI 1273 Query: 239 -DPKAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQN 297 +P+ E ++ S + AC C S L P FSFN+ G C C+GLG Q + V+ + Sbjct: 1274 PEPRWEVMVHSQHMACRKCNRSFEPLSPHSFSFNSTLGWCKACEGLGTQVGANLAAVVSD 1333 Query: 298 PELSLAGGAIRGWDRRNFYYFQ-MLKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKENI 356 P+ +L G I W ML +LA ++ P+ L +++L+G+G+ Sbjct: 1334 PKRTLREGVIDVWPSLQLPLSSAMLDALARSTGLPLDKPFDQLGHRFKRLLLHGTGE--- 1390 Query: 357 EFKYMNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGTRLRR 416 ++ + +G IR F+GV +E S ++R +L ++ C++C G+RLR Sbjct: 1391 QWHEVAAKGLPKIRFQ-FKGVYPALEE--ASKLSPSLRVKLESLVAEVECSTCGGSRLRD 1447 Query: 417 EARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNVGLN 476 ++ + + + +G + + L + KIA ++ +EI R++FLV+VGL+ Sbjct: 1448 DSSAARFRSRTIDEYCRLPLGTLLSEIQHWNLTDRERKIAGELTREIVGRVQFLVDVGLD 1507 Query: 477 YLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRD 536 YL+LSR A TLS GEAQRIRLASQ+G+GL GV+YVLDEP+IGLH RDN +LLG L LRD Sbjct: 1508 YLSLSRGAATLSNGEAQRIRLASQLGSGLCGVLYVLDEPTIGLHPRDNRKLLGALHKLRD 1567 Query: 537 LGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKR 596 LGNT++VVEHD + I DH++D GP AG GG+VVA+ + S+TG Y+SGK+ Sbjct: 1568 LGNTLLVVEHDREVIEHCDHIVDFGPRAGKLGGQVVADATPAMLGKSKTSVTGPYLSGKK 1627 Query: 597 KIEVPKKRVPA-------------------------------------NPEKVLKLTGAR 619 I +P+ R + ++++ GAR Sbjct: 1628 SIAIPRTRRISPLVVEPSRTKKKPAPSPLDKYEDRLKLAREASATKLLEGRPLIEVIGAR 1687 Query: 620 GNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAEPAPYRDIQGL 679 NNL++V++ +P+G + +TG SGSGKSTLI + L+ R+L+ A++ P + +++GL Sbjct: 1688 HNNLRNVSIQIPLGTLSVVTGPSGSGKSTLIEEVLYASIARKLHRASLT-PGAHDEVRGL 1746 Query: 680 EHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESRARGYTPGRFSFNVRGGR 739 EH +KVI +DQ P+G +P SNPATYTG F +R+LFA +PE++ RGY+ RFSFNV GGR Sbjct: 1747 EHINKVIRVDQQPLGNSPSSNPATYTGAFELIRQLFAQLPEAKLRGYSARRFSFNVPGGR 1806 Query: 740 CEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREF 799 CEAC+G+G ++EMHFL D++V C+ C+GKRYN ETL + + G++I EVLDMT EA + Sbjct: 1807 CEACEGNGQRRIEMHFLADVWVECETCRGKRYNAETLAVTFHGQSISEVLDMTCSEALQL 1866 Query: 800 FDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEP 859 F +P + R L+TL DVGL Y+ LGQ+A TLSGGEAQRVKLA ELS+ TG+TLY+LDEP Sbjct: 1867 FANIPKIRRILETLCDVGLDYLTLGQAAPTLSGGEAQRVKLAAELSRPDTGRTLYLLDEP 1926 Query: 860 TTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSG 919 TTGLHF D+ +LL+VL +L D GNT+V+IEHNLD+IK+ADW++D+GP+ G GG+++ G Sbjct: 1927 TTGLHFDDLARLLEVLQRLVDLGNTVVLIEHNLDIIKSADWLIDMGPDAGENGGQVVACG 1986 Query: 920 TPETVAECE--------------------ASHTARFLKPML 940 TPE + SHT L+P++ Sbjct: 1987 TPEMIVAHAIDALEAINSKKQSPSDRPLLRSHTGEALEPVI 2027 Score = 226 bits (577), Expect = 3e-57, Method: Composition-based stats. Identities = 112/342 (32%), Positives = 166/342 (48%), Gaps = 38/342 (11%) Query: 404 RPCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEI 463 C CEG R RE V ++ + + +M + A+E F N+ + Sbjct: 823 VTCPVCEGKRFNRETLQVKFKDKSIADVLEMDVQQALELFENVP--------------HV 868 Query: 464 GDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGV-MYVLDEPSIGLHQR 522 +L+ L +VGL+Y+ + +++ TLSGGEAQRI+LA ++ G +Y+LDEP+ GLH Sbjct: 869 RHKLQTLHDVGLDYIKIGQASPTLSGGEAQRIKLARELVKKSTGKTLYLLDEPTTGLHFA 928 Query: 523 DNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMA 582 D LLG L + D GNTV+VVEH+ D I+ AD +ID+GP G GGE++A G E I Sbjct: 929 DIHLLLGVLHNFADAGNTVLVVEHNLDVIKTADWIIDMGPEGGAAGGEILAVGTPEEIAK 988 Query: 583 VPESLTGQYMSGKRKIEVP-----------------KKRVPANPEKVLKLTGARGNNLKD 625 S TG+ ++ K A K + + GAR +NLK Sbjct: 989 NTRSHTGRALAKILSQTPASLMAAATAARAARNGKAAKNGSALLAKQITVRGARQHNLKG 1048 Query: 626 VTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAEPAPYRDIQGLEHFDKV 685 V +T+ T G SGSGKS+L DT++ QR+ + A + + + Sbjct: 1049 VDVTVERDKMTVFCGPSGSGKSSLAMDTIYAEGQRRYVESLSAYARQFVAQMQKPLVEHI 1108 Query: 686 ------IDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPES 721 I I+Q +G TPRS T T V+ R L A + ++ Sbjct: 1109 DGLSPAIAIEQKNLGHTPRSTVGTVTEVYDYFRILMARLGQA 1150 Score = 93.1 bits (230), Expect = 5e-17, Method: Composition-based stats. Identities = 39/122 (31%), Positives = 55/122 (45%), Gaps = 7/122 (5%) Query: 2 DKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYA 61 + + G +NLKN+ IP LI VTG+SGSGKSSL D L R Sbjct: 674 KALRLVGCTHNNLKNVTAEIPLGGLICVTGVSGSGKSSLVTDILVEALHRDLNFGEGNPG 733 Query: 62 RQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCP 121 ++ +E L ISI+Q PRS GT ++ D +R LF ++ E + Sbjct: 734 AHE-------KIEGLEHLDKLISIDQTPIGRTPRSNPGTYIKLFDDIRDLFTQLPEAKRR 786 Query: 122 DH 123 + Sbjct: 787 GY 788 >UniRef50_P47660 UvrABC system protein A n=6 Tax=Bacteria RepID=UVRA_MYCGE Length = 952 Score = 1048 bits (2709), Expect = 0.0, Method: Composition-based stats. Identities = 473/945 (50%), Positives = 652/945 (68%), Gaps = 12/945 (1%) Query: 2 DKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYA 61 D I V+GAR +NLKNIN+ IP+++ +V+TGLSGSGKSSLAF+T+YAEG+RRY+ESLS+YA Sbjct: 9 DFIRVKGARENNLKNINIDIPKNQFVVITGLSGSGKSSLAFNTIYAEGRRRYLESLSSYA 68 Query: 62 RQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCP 121 RQFL +KPDVD IEGLSPAISI+QK+TSHNPRST+GT+TEI+DYLRLL+AR+G P CP Sbjct: 69 RQFLGNSDKPDVDLIEGLSPAISIDQKTTSHNPRSTMGTVTEIYDYLRLLWARIGTPYCP 128 Query: 122 DHDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARIDG 181 + + QT++Q+ + + P ++ LLAP +K ++G T G++R +DG Sbjct: 129 NGHGSIQTQTINQIANQIFDLPNKSKVQLLAPTVKNQRGIFTNEFIKYKQLGFLRVLVDG 188 Query: 182 EVCDLSDPPKLELQKKHTIEVVVDRFKVRDDLT--QRLAESFETALELSGGTAVVADMDD 239 ++ L D KL+ KH I VV+DR + D R+ +S ET L+ G V D Sbjct: 189 QIYTLDDEIKLDKNTKHNISVVIDRIIINKDNQTYSRIVDSIETIDRLTNGKIEVLKED- 247 Query: 240 PKAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPE 299 L FS N C CG+S+ ELEPRLFSFN+P G+C C GLG D D++I + + Sbjct: 248 --GTILNFSKNHGCDKCGFSISELEPRLFSFNSPLGSCSYCKGLGFSYEPDVDKIIADSK 305 Query: 300 LSLAGGAIRGWDR---RNFYYFQMLKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKENI 356 LS+ GAI + +Q SL +HYK ++ P L + ++L GS E I Sbjct: 306 LSINQGAIDIFKNIVHGTSLDWQRFLSLVNHYKIPLDKPIEQLDKSQLNLILEGS-DEPI 364 Query: 357 EFKYMNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGTRLRR 416 E K +++ G +IR +EG+ + ++RR+ ET S RE + ++S C C G +L + Sbjct: 365 EIKTISNSGAKNIRFEHYEGIANLIKRRHLETNSQVSREWYSAYMSEITCKKCHGKKLIK 424 Query: 417 EARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNVGLN 476 +A V + + + +++SI +++F L+L ++ KI E LKEI +RL FL NVGL+ Sbjct: 425 DALSVKLGGIDIISFTELSIDKSIDFLLKLELNDEQKKIGELALKEIINRLSFLKNVGLD 484 Query: 477 YLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRD 536 YL L+R A TLSGGEAQRIRLA+QIG+ L GV+YV+DEPSIGLHQ+DN RL+ T++ +RD Sbjct: 485 YLNLARRASTLSGGEAQRIRLATQIGSQLTGVLYVMDEPSIGLHQKDNMRLIKTMMVMRD 544 Query: 537 LGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKR 596 LGNT++VVEHD + + AAD++IDIGP AG GGE+VA G +M S+TGQY+SGK+ Sbjct: 545 LGNTLLVVEHDSETMLAADYLIDIGPKAGNEGGELVACGTPLQVMENSNSITGQYLSGKK 604 Query: 597 KIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFP 656 +I +PK R + K + + GA+ NNLK++ +T+P+ ITGVSGSGKS+LIN TL P Sbjct: 605 QISIPKNR-HSGNGKTIIIKGAKVNNLKNINVTIPLNKLVLITGVSGSGKSSLINQTLVP 663 Query: 657 IAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFA 716 +R L + + Y++I G + DK+I + Q PIGRTPRSNPATY VF +R+LFA Sbjct: 664 ALERILYRKGVKKDT-YKEIIGANNIDKIIVVSQDPIGRTPRSNPATYISVFDDIRDLFA 722 Query: 717 GVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETL 776 E++ARGYT RFSFNV GGRC+ C GDGVI++EMHFLPD+YV C+ C GK+YN +TL Sbjct: 723 NTKEAKARGYTNSRFSFNVPGGRCDKCFGDGVIRIEMHFLPDVYVKCEVCNGKKYNSQTL 782 Query: 777 EIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQ 836 EIKY GK+I +VL M+ +EA EFF A+P ++RKL+ L DVGL Y++LG + T LSGGEAQ Sbjct: 783 EIKYLGKSIFDVLQMSCKEAYEFFKAIPNISRKLRLLCDVGLEYLQLGINVTFLSGGEAQ 842 Query: 837 RVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIK 896 R+KL++ L K+ TG+TL++LDEP+TGLH DI +LL ++ ++ G+T+VVIEHNLD+IK Sbjct: 843 RIKLSKFLQKKSTGKTLFVLDEPSTGLHLEDINKLLTIIQRIIKNGDTVVVIEHNLDIIK 902 Query: 897 TADWIVDLGPEGGSGGGEILVSGTPETVAEC-EASHTARFLKPML 940 AD+I+DLGPEGG GG+I+ GTPE + S+TA++L +L Sbjct: 903 VADYIIDLGPEGGDNGGQIVAQGTPEQLINQVNKSYTAQYLSKIL 947 Score = 81.2 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 34/122 (27%), Positives = 58/122 (47%), Gaps = 6/122 (4%) Query: 604 RVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLN 663 + +++ GAR NNLK++ + +P F ITG+SGSGKS+L +T++ +R+ Sbjct: 2 KPEWKNNDFIRVKGARENNLKNINIDIPKNQFVVITGLSGSGKSSLAFNTIYAEGRRRYL 61 Query: 664 GATIAEPAPYRDIQGLEHFDKV------IDIDQSPIGRTPRSNPATYTGVFTPVRELFAG 717 + + + D + I IDQ PRS T T ++ +R L+A Sbjct: 62 ESLSSYARQFLGNSDKPDVDLIEGLSPAISIDQKTTSHNPRSTMGTVTEIYDYLRLLWAR 121 Query: 718 VP 719 + Sbjct: 122 IG 123 >UniRef50_C1ZII9 UvrA family protein n=39 Tax=Bacteria RepID=C1ZII9_PLALI Length = 2434 Score = 1039 bits (2686), Expect = 0.0, Method: Composition-based stats. Identities = 485/992 (48%), Positives = 652/992 (65%), Gaps = 57/992 (5%) Query: 3 KIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYAR 62 +I +RGAR HNL++++LV+P++KLIV+TG+SGSGKSSLAFDTLYAEGQRRY+ESLS YAR Sbjct: 5 EITIRGAREHNLRDVSLVLPKNKLIVMTGVSGSGKSSLAFDTLYAEGQRRYIESLSTYAR 64 Query: 63 QFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCPD 122 QFL M KPDVD I GL+P+ISI+QK+ NPRSTVGTITEI+DYLR+LFARVG+ C Sbjct: 65 QFLGSMPKPDVDSITGLAPSISIQQKTAGRNPRSTVGTITEIYDYLRVLFARVGQAECHQ 124 Query: 123 HDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARIDGE 182 P+ +Q+ +V+ +L P G + +LAP+I+ +KGE +L QGY+RAR+DG+ Sbjct: 125 CHRPITSQSPENIVEQILILPAGTKFQILAPLIQRQKGEFKDLFVDLLKQGYLRARVDGK 184 Query: 183 VCDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVA------- 235 LS+ +L+ Q KHTI+VV+DR QR+AE+ E AL+L+ G +V Sbjct: 185 FISLSESLQLDKQMKHTIDVVIDRLVAGKSTRQRVAEAVENALKLANGQLIVLQDSPEEF 244 Query: 236 ----------DMDDPKAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGV 285 E F+ +AC CG S P+LFSFN+P G C C+GLG+ Sbjct: 245 LSAAIQSEDDSPSQENPSEQFFATAYACTHCGISYDPPSPQLFSFNSPQGMCADCNGLGM 304 Query: 286 QQYFDPDRVIQNPELSLAGGAIR--GWDRRNFYYFQML---------KSLADHYKFDVEA 334 + F DR+I + LS+ GA+ G + + + L K+L+ ++ Sbjct: 305 RHDFLLDRLIPDESLSIQKGALALSGKLSKLGRWRRHLIDGVAAAIEKTLSLKPGEFLKT 364 Query: 335 PWGSLSANVHKVVLYGSGKENIEFKYMNDRGDTSIRRHPFEGVLHNMERRYKETESSAVR 394 PW L + L G G +++ + + + G + G + + Y++ ++ R Sbjct: 365 PWNELPQGARDLFLDGLGNQHVTYSFKHSGGVWKHG-GKYTGYVRELLEEYRKAKNPMRR 423 Query: 395 EELAKFISNRPCASCEGTRLRREARHVYV--------------------------ENTPL 428 +L K++ C++C G+RL +A + ++ + L Sbjct: 424 RQLEKYMEVVGCSTCHGSRLNAQACNYFISSQALEMTTPAIARSGSSSAASQAKKQRLSL 483 Query: 429 PAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTLSRSAETLS 488 P + +S+G A EFF L L IAE++LKEI RL FL+ GL+YL L R+A TLS Sbjct: 484 PGVCHLSVGEAFEFFEQLDLDPTSQYIAEEVLKEIRGRLGFLLRCGLDYLALDRTAPTLS 543 Query: 489 GGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDE 548 GGE+QRIRLA QIG GLVGV+Y+LDEPSIGLH RDNE LLG+L LRD GNTVIVVEHD+ Sbjct: 544 GGESQRIRLAGQIGCGLVGVVYILDEPSIGLHPRDNEMLLGSLQDLRDQGNTVIVVEHDD 603 Query: 549 DAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEVPKKRVPAN 608 + ++AADH+ID GPG GV GG+VV EG LEA++A ES TG Y+SG+++IE+ + R + Sbjct: 604 ETMKAADHIIDFGPGPGVRGGKVVHEGSLEALLANEESETGAYLSGRKQIEIRETRR-SG 662 Query: 609 PEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIA 668 + + G +NL++V + P+G F C+TGVSGSGKS+LIND L+P+ R++N Sbjct: 663 IGTSISIQGCTHHNLQNVDVEFPLGKFICVTGVSGSGKSSLINDILWPLLNREVNLGE-G 721 Query: 669 EPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESRARGYTP 728 P ++ L DK IDIDQSPIGRTPRSNP TY +F +R+L+ +P+S+ RG+ P Sbjct: 722 APGAHQSFDNLALVDKAIDIDQSPIGRTPRSNPTTYVKLFDLIRDLYTQLPDSKTRGFKP 781 Query: 729 GRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKYKGKTIHEV 788 GRFSFNV GGRCEAC+G G K+EM FL DI+V C C+G+R+N+ETLE+++KGK I EV Sbjct: 782 GRFSFNVPGGRCEACEGHGSNKLEMDFLADIWVTCPVCQGRRFNKETLEVRFKGKNIAEV 841 Query: 789 LDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRG 848 LDM ++ A E F+ +P + LQTL DVGL YI+LGQ + TLSGGEAQR+KLA+EL KR Sbjct: 842 LDMDVQTALEHFENLPKIKNLLQTLHDVGLDYIKLGQPSPTLSGGEAQRIKLAKELGKRS 901 Query: 849 TGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADWIVDLGPEG 908 TG+T+YILDEPTTGLHF DI LL VLH D GNT++V+EHNLDVIKTADW++DLGPEG Sbjct: 902 TGKTVYILDEPTTGLHFVDIAHLLRVLHGFVDAGNTVIVVEHNLDVIKTADWVIDLGPEG 961 Query: 909 GSGGGEILVSGTPETVAECEASHTARFLKPML 940 G GGG I+ GTPE VA+CEAS+T RFL +L Sbjct: 962 GKGGGRIIAQGTPEMVAQCEASYTGRFLARVL 993 Score = 997 bits (2579), Expect = 0.0, Method: Composition-based stats. Identities = 464/1017 (45%), Positives = 617/1017 (60%), Gaps = 82/1017 (8%) Query: 3 KIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYAR 62 I +RGA HNL+ I+L IPRD++ V G SGSGK+SLA DTLYAEGQRRYVESLS+YAR Sbjct: 1070 NIVIRGASQHNLQKISLDIPRDQMSVFCGPSGSGKTSLAMDTLYAEGQRRYVESLSSYAR 1129 Query: 63 QFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCPD 122 QFL M KP V+HI GL P+I+IEQK+ H PRSTVGT TEI+DYLR+L+AR+G CPD Sbjct: 1130 QFLGQMPKPKVEHIHGLQPSIAIEQKTVGHTPRSTVGTTTEIYDYLRVLYARLGTQHCPD 1189 Query: 123 HDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARIDGE 182 + + +QT ++D ++++PEG RL++LAP ++ K E L QG+ R R+DG Sbjct: 1190 CRIAVESQTTDDVIDLLMAKPEGTRLLVLAPQEVPVGQQYAKVWERLKEQGFSRVRVDGT 1249 Query: 183 VCDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVADMDD--- 239 L + P+++ ++KH +E+V+DR + +RLA+S E A + G VA +DD Sbjct: 1250 TYRLEEVPEIDRRRKHVVEIVIDRVTIASGSRRRLADSVEAAFDQGKGVIRVAFVDDDKP 1309 Query: 240 -PKAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNP 298 + FS AC CG S L P FSFN+P G C +C+GLG QQ + +I +P Sbjct: 1310 ENSWKVQPFSLFRACSQCGRSFETLAPHNFSFNSPLGWCESCEGLGTQQGTNLAALIGDP 1369 Query: 299 ELSLAGGAIRGWDRR--NFYYFQMLKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKENI 356 +L GAI W + F++L +L+ ++ P+ L ++VL+G+G++ Sbjct: 1370 TRTLREGAISAWPDPRQSPAMFELLDALSRGVGLSLDTPFNQLEPAEQRLVLFGAGEQWF 1429 Query: 357 EF--------------------KYMNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREE 396 K + R F+G+ +E + + S R+ Sbjct: 1430 TVYQVAQPAAAKKSSTKAAAKSKKSSTADQAVKYRFQFKGLYPALEEASRVSYS--FRQS 1487 Query: 397 LAKFISNRPCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIA 456 L I PC+SC G+RLR +A V ++ L + ++ + A EF + L L + KIA Sbjct: 1488 LFDLIGEVPCSSCSGSRLREDASAVRLQGKTLQQLCELPLNKAQEFLHGLTLNKTQQKIA 1547 Query: 457 EKILKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPS 516 +L+E RL FLV+VGL+YLTLSR+ TLSGGE+QRIRLA Q+G L GV+YVLDEP+ Sbjct: 1548 GDLLEEGAGRLDFLVDVGLHYLTLSRTLPTLSGGESQRIRLAGQLGRALTGVLYVLDEPT 1607 Query: 517 IGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGP 576 IGLH DN RLL L LRDLGNTV++VEHD + + AAD + D GPG+G GG V AEG Sbjct: 1608 IGLHPSDNGRLLQALKKLRDLGNTVVLVEHDREVLAAADRLYDFGPGSGRLGGLVTAEGT 1667 Query: 577 LEAIMAVPESLTGQYMSGKRKIEVPKKRVPANPEK------------------------- 611 I +SLTG+++S K I VP +R Sbjct: 1668 PHEIEHCDDSLTGRFLSLKEDILVPTERRVPARFGRSQAPVDRAKSGAATKGKAKAQVAA 1727 Query: 612 -----------VLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQR 660 L+L GAR NNL++V L +P+G T ITGVSGSGKS+LI DTL R Sbjct: 1728 TTKASASKPLFWLELIGARQNNLRNVDLRIPLGALTAITGVSGSGKSSLIADTLGKAIAR 1787 Query: 661 QLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPE 720 +L+ + +P PY ++ GL++ K+I +DQ P+G TP SNPATYTGVF +RELFA +PE Sbjct: 1788 KLH-RSSEQPGPYDELLGLDYLSKLIVVDQQPLGNTPASNPATYTGVFEHIRELFAHLPE 1846 Query: 721 SRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKY 780 S+ RGY P RFSFN GGRCE C+G+G +EMHFLPD++V CD C G+RYN ETL +K+ Sbjct: 1847 SKVRGYRPARFSFNRAGGRCETCEGNGQKLIEMHFLPDLWVECDTCHGRRYNPETLAVKF 1906 Query: 781 KGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKL 840 +GK I +VL+M I EA + F++ P + L L +GL Y+ LGQ A TLSGGEAQRVKL Sbjct: 1907 QGKNIADVLEMPISEAVKLFESFPKIRGPLAVLDAIGLGYLTLGQPAPTLSGGEAQRVKL 1966 Query: 841 ARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADW 900 A EL++ TG TLY+LDEPTTGLHF DI++LL +L L D GNT+VVIEHNLDVIKT DW Sbjct: 1967 AAELARPSTGSTLYLLDEPTTGLHFDDIRKLLKILQSLVDAGNTVVVIEHNLDVIKTCDW 2026 Query: 901 IVDLGPEGGSGGGEILVSGTPETVAE--------------CEA---SHTARFLKPML 940 IVDLGP GS GG I+ +GTPE + S TA+ L P+L Sbjct: 2027 IVDLGPAAGSEGGYIVATGTPEDLVRIAQGEVPDDDPSKKNPQQHVSLTAQCLAPVL 2083 Score = 210 bits (534), Expect = 3e-52, Method: Composition-based stats. Identities = 105/384 (27%), Positives = 167/384 (43%), Gaps = 82/384 (21%) Query: 404 RPCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEI 463 C C+G R +E V + + + DM + A+E F NL +I Sbjct: 814 VTCPVCQGRRFNKETLEVRFKGKNIAEVLDMDVQTALEHFENLP--------------KI 859 Query: 464 GDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGV-MYVLDEPSIGLHQR 522 + L+ L +VGL+Y+ L + + TLSGGEAQRI+LA ++G G +Y+LDEP+ GLH Sbjct: 860 KNLLQTLHDVGLDYIKLGQPSPTLSGGEAQRIKLAKELGKRSTGKTVYILDEPTTGLHFV 919 Query: 523 DNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEG------- 575 D LL L D GNTVIVVEH+ D I+ AD VID+GP G GG ++A+G Sbjct: 920 DIAHLLRVLHGFVDAGNTVIVVEHNLDVIKTADWVIDLGPEGGKGGGRIIAQGTPEMVAQ 979 Query: 576 ----------------------------------------------PLEAIMAVPESLTG 589 + ++ +P+ Sbjct: 980 CEASYTGRFLARVLEASGRSISQPVSLGSAATSTGKGQGTKKRRKSTADHVVEMPQKSVA 1039 Query: 590 QYMSGKRKIEVPKK--------RVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGV 641 + + K+ P + + + + + GA +NL+ ++L +P + G Sbjct: 1040 RTFPPETKVASPSRWQAALPLKQQDREAQTNIVIRGASQHNLQKISLDIPRDQMSVFCGP 1099 Query: 642 SGSGKSTLINDTLFPIAQRQLNGATIAEPAPYRDIQGLEHFDKV------IDIDQSPIGR 695 SGSGK++L DTL+ QR+ + + + + + I I+Q +G Sbjct: 1100 SGSGKTSLAMDTLYAEGQRRYVESLSSYARQFLGQMPKPKVEHIHGLQPSIAIEQKTVGH 1159 Query: 696 TPRSNPATYTGVFTPVRELFAGVP 719 TPRS T T ++ +R L+A + Sbjct: 1160 TPRSTVGTTTEIYDYLRVLYARLG 1183 >UniRef50_C0QY85 Exinuclease ABC subunit A n=6 Tax=Bacteria RepID=C0QY85_BRAHW Length = 1938 Score = 1038 bits (2685), Expect = 0.0, Method: Composition-based stats. Identities = 460/978 (47%), Positives = 628/978 (64%), Gaps = 47/978 (4%) Query: 2 DKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYA 61 + IE+RGA+ HNLKN++L IP L +TG+SGSGKSSLAFDT++ EGQRRY+ESLSAYA Sbjct: 4 NSIEIRGAKEHNLKNVSLSIPHKTLTTLTGVSGSGKSSLAFDTIFKEGQRRYLESLSAYA 63 Query: 62 RQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCP 121 RQFL +M K DV+HIEGLSP ISI+QKS + NPRSTVGT+TEI+D+ RLLFAR+G P C Sbjct: 64 RQFLGVMAKADVEHIEGLSPTISIDQKSVNKNPRSTVGTVTEIYDFFRLLFARLGVPYCS 123 Query: 122 DHDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARIDG 181 ++ Q+ Q+ +VL + KR+++LAPI+++RKGE+ K +E + GY R RID Sbjct: 124 KCGHKISKQSEDQIAQSVLREFAEKRILVLAPIVRDRKGEYRKEIEEVKLAGYPRIRIDN 183 Query: 182 EVCDLSD--PPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVADMDD 239 V + P+L+ +KHT+E+V+DR KV D R+ + E A+ ++ G + + Sbjct: 184 IVYKFDEDEIPELKRYEKHTLEIVIDRIKVEDKYLSRITDDIERAIRITKGLVAFYEEHE 243 Query: 240 PKAEEL--------------------------------LFSANFACPICGYSMRELEPRL 267 E L L++ +C CG+S+ ++EP L Sbjct: 244 KSEEVLETQTPESTEEDTKTKKKKIKMSKQFEIDKYYKLYTTERSCANCGHSIADIEPNL 303 Query: 268 FSFNNPAGACPTCDGLGVQQYFDPDRVIQNPELSLAGGAIRGWDRRNF-----YYFQMLK 322 FSFNNP GAC C GLGV+ F ++++ L++ GA+ + + Y L+ Sbjct: 304 FSFNNPMGACTVCGGLGVEHVFTEKHILKDENLNIYEGALSCFVDDHIGFDMEYGTDELE 363 Query: 323 SLADHYKFDVEAPWGSLSANVHKVVLYGSGKENIEFKYMNDRGDTSIRRHPFEGVLHNME 382 +A YK D++ PW L+ K +LYG+ KE K R P G+L ++ Sbjct: 364 VIAKTYKIDLKKPWKDLTKTEKKYLLYGTDKEVKWRKRFWYHSKLVEERVP--GILDRLK 421 Query: 383 RRYKETESSAVREELAKFISNRPCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEF 442 Y ET ++ A F+ C C+G R+ +A V + S M+I ++ Sbjct: 422 YDY-ETYKNSY---YANFMDEVQCPKCKGKRINEDALSVKFNGKTISDFSSMTIEDLYDY 477 Query: 443 FNNLKLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIG 502 F LKL I I+KEI RL FLV VGL YLT+ RS+ TLSGGE+QRIRLASQIG Sbjct: 478 FTKLKLKPNEEVIGAPIVKEIIYRLTFLVKVGLTYLTIERSSPTLSGGESQRIRLASQIG 537 Query: 503 AGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGP 562 +GL GV+YVLDEPSIGLHQ DN++L+ +L LRD NTVIVVEHD++ + +D++IDIGP Sbjct: 538 SGLEGVLYVLDEPSIGLHQSDNKKLIESLKTLRDKNNTVIVVEHDKETMEESDYLIDIGP 597 Query: 563 GAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEVPKKRVPANPEKVLKLTGARGNN 622 AGV+GGEVV G E + S T +Y+ G IE+PK+R K LK+ GA N Sbjct: 598 NAGVNGGEVVGIGDYEEFIKSDRSYTAKYLRGDDDIEIPKQRR-EGNGKFLKVIGANQFN 656 Query: 623 LKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAEPAPYRDIQGLEHF 682 LK++ + P+G+F +TG+SGSGKSTL+ + L G T+ P + I+GLE+ Sbjct: 657 LKNIDVQFPLGVFIVVTGLSGSGKSTLVENILMRALHNHFYGKTLT-PGSHERIEGLENI 715 Query: 683 DKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESRARGYTPGRFSFNVRGGRCEA 742 DKVI++DQSPIGRTPRSNPATYT V +P+R+LFA ++ RGY GRFSFNV+ GRC Sbjct: 716 DKVIEVDQSPIGRTPRSNPATYTKVLSPIRDLFAATKLAKMRGYDKGRFSFNVKTGRCPT 775 Query: 743 CQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDA 802 C+G GVI++EM FL ++ VPC++C GKR+N ETL++KYK KTI++VL+M++ EA FFD Sbjct: 776 CEGAGVIELEMQFLSNVLVPCEECGGKRFNAETLDVKYKDKTIYDVLEMSVSEAIAFFDG 835 Query: 803 VPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTG 862 + ++ R L+ + D+GL YI+LGQ +TTLSGGEAQR+KLA EL K TG TLYILDEPTTG Sbjct: 836 ITSITRILKIMEDIGLGYIKLGQPSTTLSGGEAQRIKLASELHKISTGNTLYILDEPTTG 895 Query: 863 LHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPE 922 LHF DI++LL L L ++GNT++V+EHNLDVIK AD I+D+GP G GG ++ G PE Sbjct: 896 LHFEDIKKLLKALDGLVEKGNTVLVVEHNLDVIKCADHIIDMGPLSGDKGGRVVAEGKPE 955 Query: 923 TVAECEASHTARFLKPML 940 + + + S TA+ LK +L Sbjct: 956 DIIKVKESLTAKELKEIL 973 Score = 870 bits (2248), Expect = 0.0, Method: Composition-based stats. Identities = 375/964 (38%), Positives = 560/964 (58%), Gaps = 52/964 (5%) Query: 3 KIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYAR 62 + ++GA HNLKNI+L +P++++ V+TG+SGSGK+SLAFDT++ EGQRR+VESLS YAR Sbjct: 995 SLIIKGANKHNLKNISLTLPKNQINVITGVSGSGKTSLAFDTIFKEGQRRFVESLSTYAR 1054 Query: 63 QFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCPD 122 +FL E +V+ IEGL+PAI+I+QK+ S NPRSTV T+TEI+DY RL+FAR+ +P CP Sbjct: 1055 RFLGRFEDANVEKIEGLAPAIAIDQKNVSRNPRSTVATVTEIYDYFRLIFARLAKPHCPH 1114 Query: 123 HDVP--LAAQTVSQMVDNVLSQPEGKRLMLLAPIIKER-----------KGEHTKTLENL 169 + L A+T S + ++ + +L++++P+ + K +E Sbjct: 1115 CNDKDTLKAETPSILATEIIDTMDLHKLVIISPLYHSSFNHRFTFDDNDAKDIKKIIEKT 1174 Query: 170 ASQGYIRARIDGEVCDLSDPP-----KLELQKKHTIEVVVDRFKVRDDLTQRLAESFETA 224 GY+R +I+ + D +L ++ +++ +V+DR V D R+A++ + A Sbjct: 1175 REAGYVRMQINNNDYVIDDITEDDIKELSKEEIYSVGIVIDRIVVGKDKRARIADAIDRA 1234 Query: 225 LELSGGTAVVADMDDPKAEELLFSANFACPICGYSMR-ELEPRLFSFNNPAGACPTCDGL 283 ++LS G A + +E + AC + G E+ PR FSFN+ G C C GL Sbjct: 1235 MDLSNGIAHIKASHGIIIKESFHTKFPACLLHGILFDFEVTPRHFSFNSHWGYCEECKGL 1294 Query: 284 GVQQYFDPDRVIQNPELSLAGGAIR-----GWDRRNFYYFQMLKSLADHYKF---DV-EA 334 G + F D I++ L GA+ + +Y L D+ + Sbjct: 1295 GSKPTFSIDLAIKDSTKPLFDGALDTAIHNMFSTPGKHYTDSLMRFLRRNGITKKDLYDT 1354 Query: 335 PWGSLSANVHKVVLYGSGKENIEFKYMNDRGDTSIRRHPFEGVLHNMERRYKETESSAVR 394 P+ L V +G + E S Sbjct: 1355 PFNELDQKVIDTFFFGGDYSVGNIITAWHSNNDVT----------------SEDYSEWKD 1398 Query: 395 EELAKFISNRPCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLK--LAGQR 452 + L KF + C SC G RL R ++N + + M++ A+ F+ L L+ + Sbjct: 1399 KSLGKFFIDEECDSCHGERLNEIIRSYTIQNKNISQVCAMTVEEAIHLFDELPNLLSERE 1458 Query: 453 AKIAEKILKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVL 512 I+++ +KEI RL FL VGL YL LSR TLSGGEAQRIRLASQ+G+ L GV+YVL Sbjct: 1459 NTISKEAIKEIRTRLSFLDKVGLGYLFLSRKYATLSGGEAQRIRLASQLGSKLTGVLYVL 1518 Query: 513 DEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVV 572 DEP++GLH RD LL TL LRDL NT+++VEHD D ++AAD+++D+GP AG GGEVV Sbjct: 1519 DEPTVGLHPRDTNHLLDTLKELRDLKNTLVIVEHDRDTMKAADNIVDMGPYAGAFGGEVV 1578 Query: 573 AEGPLEAIMAVPESLTGQYMSGKRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPV 632 +G + I+ SLTG Y+S ++K+ K V + +KL NNLK++ + +P+ Sbjct: 1579 FQGKYDDILKDDNSLTGNYLSERKKV-FEKTAVRNEETECIKLKNVSTNNLKNIDVDIPL 1637 Query: 633 GLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSP 692 +TGVSGSGKS+LI DTL+P +++ + + + + ++ I +DQ Sbjct: 1638 KKIVVVTGVSGSGKSSLIIDTLYPALKKR----RLNQYSKFESVEIPSIVSDTILVDQIS 1693 Query: 693 IGRTPRSNPATYTGVFTPVRELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVE 752 I + RS +Y+ VF +R +FA P ++A+ + PGRFS+N + GRC C+G G+ K+ Sbjct: 1694 IVGSIRSTLVSYSKVFDKIRNIFAKTPTAKAKAFAPGRFSYNGKEGRCNICEGKGIRKIA 1753 Query: 753 MHFLPDIYVPCDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQT 812 MHFL D+ + C+ C GKRYN ETL +++K I EVL++T++EA EFFD ++ + L Sbjct: 1754 MHFLSDMEIVCEACGGKRYNDETLSVRFKSLNIAEVLELTVDEAIEFFDFDKSVTKTLSI 1813 Query: 813 LMDVGLTYIRLGQSATTLSGGEAQRVKLARELS-KRGTGQTLYILDEPTTGLHFADIQQL 871 + +VGL YI+L Q T SGGE QR+KLA EL+ K+G +YILDEPTTGLHF D+ +L Sbjct: 1814 MSEVGLGYIKLSQRLDTFSGGELQRLKLATELAKKQGDEHIVYILDEPTTGLHFDDVNKL 1873 Query: 872 LDVLHKLRDQGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEASH 931 L L+KL ++G+++++IEHN DVIK AD+I+DLG EGGS GGEI+ GT E + E + + Sbjct: 1874 LIALNKLVEKGHSVIIIEHNPDVIKAADYIIDLGLEGGSNGGEIIAKGTVEEILEMKKGY 1933 Query: 932 TARF 935 T ++ Sbjct: 1934 TWKY 1937 Score = 256 bits (654), Expect = 3e-66, Method: Composition-based stats. Identities = 131/405 (32%), Positives = 192/405 (47%), Gaps = 54/405 (13%) Query: 353 KENIEFKYMNDRGDTSIRRHPFEGVLHNMERRYKETESSAVR------------------ 394 + IE + VL + + T+ + +R Sbjct: 716 DKVIEVDQSPIGRTPRSNPATYTKVLSPIRDLFAATKLAKMRGYDKGRFSFNVKTGRCPT 775 Query: 395 -------EELAKFISNR--PCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNN 445 E +F+SN PC C G R E V ++ + + +MS+ A+ FF+ Sbjct: 776 CEGAGVIELEMQFLSNVLVPCEECGGKRFNAETLDVKYKDKTIYDVLEMSVSEAIAFFDG 835 Query: 446 LKLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGL 505 + I LK + ++GL Y+ L + + TLSGGEAQRI+LAS++ Sbjct: 836 IT--------------SITRILKIMEDIGLGYIKLGQPSTTLSGGEAQRIKLASELHKIS 881 Query: 506 VG-VMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGA 564 G +Y+LDEP+ GLH D ++LL L L + GNTV+VVEH+ D I+ ADH+ID+GP + Sbjct: 882 TGNTLYILDEPTTGLHFEDIKKLLKALDGLVEKGNTVLVVEHNLDVIKCADHIIDMGPLS 941 Query: 565 GVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEVPKKRVPANPEKVLK------LTGA 618 G GG VVAEG E I+ V ESLT + + K KK E + + GA Sbjct: 942 GDKGGRVVAEGKPEDIIKVKESLTAKELKEILKPSKKKKENIKTEETKKEENTSLIIKGA 1001 Query: 619 RGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAEPAPYRDIQG 678 +NLK+++LTLP ITGVSGSGK++L DT+F QR+ + + Sbjct: 1002 NKHNLKNISLTLPKNQINVITGVSGSGKTSLAFDTIFKEGQRRFVESLSTYARRFLGRFE 1061 Query: 679 LEHFDKV------IDIDQSPIGRTPRSNPATYTGVFTPVRELFAG 717 + +K+ I IDQ + R PRS AT T ++ R +FA Sbjct: 1062 DANVEKIEGLAPAIAIDQKNVSRNPRSTVATVTEIYDYFRLIFAR 1106 Score = 184 bits (466), Expect = 2e-44, Method: Composition-based stats. Identities = 78/192 (40%), Positives = 107/192 (55%), Gaps = 17/192 (8%) Query: 763 CDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAVP----------------AL 806 CD C G+R N + K I +V MT+EEA FD +P + Sbjct: 1410 CDSCHGERLNEIIRSYTIQNKNISQVCAMTVEEAIHLFDELPNLLSERENTISKEAIKEI 1469 Query: 807 ARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFA 866 +L L VGL Y+ L + TLSGGEAQR++LA +L + TG LY+LDEPT GLH Sbjct: 1470 RTRLSFLDKVGLGYLFLSRKYATLSGGEAQRIRLASQLGSKLTG-VLYVLDEPTVGLHPR 1528 Query: 867 DIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAE 926 D LLD L +LRD NT+V++EH+ D +K AD IVD+GP G+ GGE++ G + + + Sbjct: 1529 DTNHLLDTLKELRDLKNTLVIVEHDRDTMKAADNIVDMGPYAGAFGGEVVFQGKYDDILK 1588 Query: 927 CEASHTARFLKP 938 + S T +L Sbjct: 1589 DDNSLTGNYLSE 1600 Score = 106 bits (264), Expect = 5e-21, Method: Composition-based stats. Identities = 61/264 (23%), Positives = 106/264 (40%), Gaps = 43/264 (16%) Query: 2 DKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYA 61 + I+++ T+NLKNI++ IP K++VVTG+SGSGKSSL DTLY ++R + S + Sbjct: 1616 ECIKLKNVSTNNLKNIDVDIPLKKIVVVTGVSGSGKSSLIIDTLYPALKKRRLNQYSKF- 1674 Query: 62 RQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEP--- 118 +E P + +S I ++Q S + RST+ + +++ D +R +FA+ Sbjct: 1675 ----ESVEIPSI-----VSDTILVDQISIVGSIRSTLVSYSKVFDKIRNIFAKTPTAKAK 1725 Query: 119 --------------RCPDHDVPLAAQTVSQMV---DNVLSQPEGKRLMLLAPIIKERKGE 161 RC + + + + V GKR ++ + Sbjct: 1726 AFAPGRFSYNGKEGRCNICEGKGIRKIAMHFLSDMEIVCEACGGKRYNDETLSVRFKSLN 1785 Query: 162 HTKTLENLASQGYIRARIDGEVCDLSDPPKLELQKKHTIEV----VVDRFKV-RDDLTQR 216 + LE + E D L + + + R QR Sbjct: 1786 IAEVLELTVDEAI-------EFFDFDKSVTKTLSIMSEVGLGYIKLSQRLDTFSGGELQR 1838 Query: 217 LAESFETALELSGGTAVVADMDDP 240 L + E A + +V +D+P Sbjct: 1839 LKLATELAKKQGD-EHIVYILDEP 1861 >UniRef50_B6WY93 Putative uncharacterized protein n=1 Tax=Desulfovibrio piger ATCC 29098 RepID=B6WY93_9DELT Length = 976 Score = 1034 bits (2673), Expect = 0.0, Method: Composition-based stats. Identities = 459/964 (47%), Positives = 614/964 (63%), Gaps = 36/964 (3%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 63 I + AR HNLK+I+L IPRD+L+VV G SGSGKS+LAFD +YAEGQRRYVESLSAYARQ Sbjct: 6 IHIEKARQHNLKDISLDIPRDELVVVCGPSGSGKSTLAFDIVYAEGQRRYVESLSAYARQ 65 Query: 64 FLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCPDH 123 FL M+KPDV+ IEGLSPAIS+EQ+STS PRSTVGT+TEIHD+LR+ FAR+G CP Sbjct: 66 FLPQMDKPDVEKIEGLSPAISLEQQSTSRTPRSTVGTVTEIHDFLRVFFARLGRMYCPSC 125 Query: 124 DVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARIDGEV 183 P+ A++ +++ ++++ P+G + M++AP+++ +KG H + L ++G+ R R+DG Sbjct: 126 GRPIEARSADEIITDIMALPQGSKFMVMAPLVELQKGTHQDKFKKLRAEGFARVRVDGAF 185 Query: 184 CDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVADMDDPKAE 243 L D P L+ KKH+I++VVDR +D + RLA+S E AL G V D P+ E Sbjct: 186 HTLDDVPALDKNKKHSIDLVVDRLVNKDGIRGRLADSVELALRYGEGRLTVHLPDRPEGE 245 Query: 244 E-LLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPELSL 302 ++ S CP C S+ P+LFSFN+P GACP C GLG YF+P + N LSL Sbjct: 246 RDIIHSTTSVCPHCHISLPAPSPQLFSFNSPQGACPRCVGLGTVDYFEPRLIAPNRGLSL 305 Query: 303 AGGAIRGWDRRNF--YYFQMLKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKENIEFK- 359 GA+ W Y L++L + + F + P S + YG ++ Sbjct: 306 NTGALLPWAESKHFQRYEPALRALGERHGFTLSTPLEDFSDAALACLFYGEDEKGRPAAH 365 Query: 360 -------------------------YMNDRGDTSIRRHPFEGVLHNMERRYKETESSAVR 394 + + + + GV+ +E+ + A R Sbjct: 366 SSGLRRNWMGGNVAMDATGDYQSELFAGRAAEVKVSEERWPGVIPLLEKGMQ--YGEAWR 423 Query: 395 EELAKFISNRPCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAK 454 E LA+F + C C G RL+ EA V V++ + +S+ A+ + G+ A Sbjct: 424 EILARFRQSTDCPDCHGARLKPEALAVRVDDLNIAQFCSLSVERALRWLEERHFDGRHAL 483 Query: 455 IAEKILKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDE 514 +AE +LKE+ RL F+ NVGL YL+L R+ TLSGGEAQRIRLASQ+G+GLVGV YVLDE Sbjct: 484 VAEPLLKELTHRLSFMRNVGLEYLSLGRAMATLSGGEAQRIRLASQLGSGLVGVTYVLDE 543 Query: 515 PSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAE 574 PSIGLH RDNERLLGTL L+ GNTV+VVEHDE I AAD VI++GPG+G GGE++ + Sbjct: 544 PSIGLHPRDNERLLGTLRSLQRRGNTVLVVEHDEATICAADTVIELGPGSGSQGGEIMFQ 603 Query: 575 GPLEAIMAVPESLTGQYMSGKRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGL 634 G + ++ ++LT +Y+ G I +P +R P+ L L NNL+ + P+G+ Sbjct: 604 GSVPQLLRA-DTLTARYLRGDASISLPDER--REPQGWLTLHNVTTNNLRGIDCRFPLGV 660 Query: 635 FTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAEPAPYR--DIQGLEHFDKVIDIDQSP 692 TC+TGVSGSGKS+L+ DTL+ L +G ++++ IDQ+P Sbjct: 661 LTCVTGVSGSGKSSLVVDTLYKHLAISLGQRVDQPGTIAGLSYSEGARPIERIVAIDQTP 720 Query: 693 IGRTPRSNPATYTGVFTPVRELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVE 752 IGRTPRSNPATYT VF +R +FA P++R RGY PGRFSFNVRGGRCEAC GDG I+VE Sbjct: 721 IGRTPRSNPATYTKVFDEIRNIFAMTPDARKRGYKPGRFSFNVRGGRCEACGGDGQIRVE 780 Query: 753 MHFLPDIYVPCDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQT 812 MHFLPD+YV CD CKG+RYN ETLE++YKG I EVLD+ +++AR FF+ P L R+L Sbjct: 781 MHFLPDVYVTCDVCKGRRYNHETLEVRYKGLNIAEVLDLPVQQARAFFENYPVLERRLAV 840 Query: 813 LMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLL 872 L +VGL Y+RLGQ ATTLSGGEAQR+K++REL KR TLYILDEPTTGLH ++ +L+ Sbjct: 841 LEEVGLEYLRLGQPATTLSGGEAQRIKISRELGKRSLPGTLYILDEPTTGLHMHEVGKLI 900 Query: 873 DVLHKLRDQGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHT 932 VLH L D+G ++VVIEHN D+I AD ++D+GP GG GG ++ GTPE + S T Sbjct: 901 KVLHALVDKGASVVVIEHNTDMILAADHVLDMGPGGGENGGLVVSQGTPEAIVADPNSVT 960 Query: 933 ARFL 936 RFL Sbjct: 961 GRFL 964 Score = 168 bits (426), Expect = 8e-40, Method: Composition-based stats. Identities = 77/202 (38%), Positives = 116/202 (57%), Gaps = 15/202 (7%) Query: 403 NRPCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKE 462 C C+G R E V + + + D+ + A FF N + Sbjct: 788 YVTCDVCKGRRYNHETLEVRYKGLNIAEVLDLPVQQARAFFENYPV-------------- 833 Query: 463 IGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIG-AGLVGVMYVLDEPSIGLHQ 521 + RL L VGL YL L + A TLSGGEAQRI+++ ++G L G +Y+LDEP+ GLH Sbjct: 834 LERRLAVLEEVGLEYLRLGQPATTLSGGEAQRIKISRELGKRSLPGTLYILDEPTTGLHM 893 Query: 522 RDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIM 581 + +L+ L L D G +V+V+EH+ D I AADHV+D+GPG G +GG VV++G EAI+ Sbjct: 894 HEVGKLIKVLHALVDKGASVVVIEHNTDMILAADHVLDMGPGGGENGGLVVSQGTPEAIV 953 Query: 582 AVPESLTGQYMSGKRKIEVPKK 603 A P S+TG+++ +R+ + ++ Sbjct: 954 ADPNSVTGRFLMQERRDRLKRR 975 Score = 78.9 bits (193), Expect = 9e-13, Method: Composition-based stats. Identities = 34/117 (29%), Positives = 53/117 (45%), Gaps = 6/117 (5%) Query: 609 PEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIA 668 + + AR +NLKD++L +P + G SGSGKSTL D ++ QR+ + A Sbjct: 2 NNPCIHIEKARQHNLKDISLDIPRDELVVVCGPSGSGKSTLAFDIVYAEGQRRYVESLSA 61 Query: 669 EPAPYRDIQGLEHFDKV------IDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVP 719 + +K+ I ++Q RTPRS T T + +R FA + Sbjct: 62 YARQFLPQMDKPDVEKIEGLSPAISLEQQSTSRTPRSTVGTVTEIHDFLRVFFARLG 118 >UniRef50_Q2RZZ5 Excinuclease ABC, A subunit n=1 Tax=Salinibacter ruber DSM 13855 RepID=Q2RZZ5_SALRD Length = 1016 Score = 1033 bits (2671), Expect = 0.0, Method: Composition-based stats. Identities = 479/985 (48%), Positives = 650/985 (65%), Gaps = 50/985 (5%) Query: 2 DKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYA 61 + I +RGAR +NL+ I+L IPR++L+VVTGLSGSGKSSLAFDT++AEGQRRY+ESLSAYA Sbjct: 3 EHITLRGARENNLQAIDLDIPRNRLVVVTGLSGSGKSSLAFDTIFAEGQRRYMESLSAYA 62 Query: 62 RQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCP 121 RQFL +ME+P++D+++GLSP ISIEQK+ S NPRSTVGT+TE++D+LRLL+AR Sbjct: 63 RQFLEMMERPEIDYVDGLSPVISIEQKTVSGNPRSTVGTVTEVYDFLRLLYARAATAYSH 122 Query: 122 DHDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARIDG 181 + + Q+ ++VD +L PEG RL +LAP+++ RKG + + E ++QG+ R R+DG Sbjct: 123 ETGNRMRQQSDDEIVDGILDFPEGTRLQILAPVVRGRKGHYRELFEQTSAQGFERFRVDG 182 Query: 182 EVCDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVADMDDPK 241 E+ + KLE H +EVV+DR ++D + R+++S ETALE+ GGT + +D P Sbjct: 183 EMRTYEEDMKLERYATHDVEVVIDRLAIKDGIRSRVSQSVETALEMGGGTLIADVVDGPD 242 Query: 242 AEE---LLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNP 298 E LFS + P G S E P +FSFN P GACP C+GLG + P+ V+ +P Sbjct: 243 GVETGDHLFSRDLVDPETGLSYEEPSPNMFSFNTPYGACPECEGLGTAKQIAPELVVPHP 302 Query: 299 ELSLAGGAIRGW-DRRNFYYFQMLKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKENIE 357 E ++ GA+ + R+ + F L+++A+ Y FD + P +LS V+L G+G+E E Sbjct: 303 EKTINEGALAPLGEPRDIWIFNQLEAVAEAYDFDFDTPIEALSDEQLAVILEGAGEEQFE 362 Query: 358 FKYMNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGTRLRRE 417 +Y +G +H F+G+ ++ Y+ET SS R F+ C +C G RL+ E Sbjct: 363 IEY-GYKGREVQYKHRFDGLYDHIWHTYEETSSSKKRRRAESFMREMDCPACGGGRLKTE 421 Query: 418 ARHVYVENTPLPAISDMSIGHAMEFFNNLKL-AGQRAKIAEKILKEIGDRLKFLVNVGLN 476 + H + + ++ M + +F ++ ++ +I E I+KE+ +RL FL+ VG+ Sbjct: 422 SLHYRIGGKSIADLAQMDLTRLRDFVEDVPFDTERQTRIGEPIVKEVRERLDFLIGVGVG 481 Query: 477 YLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRD 536 YLTL R A TLSGGE+QRIRLA+Q+G L GV+YVLDEP+IGLH RDN+RL+ +L LRD Sbjct: 482 YLTLDRPARTLSGGESQRIRLATQVGTQLTGVLYVLDEPTIGLHPRDNDRLIESLESLRD 541 Query: 537 LGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVP------------ 584 LGN+V+VVEHD D I AADHV+D+GPGAG+HGG V+ GP + P Sbjct: 542 LGNSVVVVEHDRDMIEAADHVVDLGPGAGIHGGHVITTGPPSVLTVDPVEQTNGTAANGA 601 Query: 585 -----------------------------ESLTGQYMSGKRKIEVPKKRVPANPEKVLKL 615 ES T Y+ G+R I +P +R E + L Sbjct: 602 AEHEIEDNGVARQQVAERAADYDSDHYDFESFTAAYLQGERVIPLPDERRDGTGES-ITL 660 Query: 616 TGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAEPAPYRD 675 GA G+NLK + +P+G C+TGVSGSGKSTL+N TLFPI R + A P PY Sbjct: 661 KGATGHNLKGEDVDVPLGTLICVTGVSGSGKSTLVNQTLFPILHRHHHNAKTV-PLPYDR 719 Query: 676 IQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESRARGYTPGRFSFNV 735 ++G++H DKVI+IDQ PIGRTPRSN ATYT + +R+LFA +PE+ RGYT RFSFN Sbjct: 720 VEGIDHVDKVIEIDQQPIGRTPRSNAATYTKLMDYLRDLFAQLPEAEIRGYTKSRFSFNT 779 Query: 736 RGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEE 795 GRC+ C G G + +EM+FLPD+ V CD C GKRY ETLE++YKGK I EVLDMT+ E Sbjct: 780 DPGRCDKCGGTGTVTLEMNFLPDVDVTCDACDGKRYGPETLEVEYKGKNIAEVLDMTVAE 839 Query: 796 AREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYI 855 A +FF+ P L R L+TL VGL Y+ LGQS+TTLSGGEAQRVKL++ELS+ GTG TLYI Sbjct: 840 AVDFFENQPRLVRTLKTLDAVGLGYLTLGQSSTTLSGGEAQRVKLSKELSRPGTGDTLYI 899 Query: 856 LDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEI 915 LDEPTTG+HF D++ LL+VLH L D+GNT++VIEHN+DVIK AD ++DLGPEGG GGEI Sbjct: 900 LDEPTTGMHFEDVRHLLNVLHGLVDEGNTVMVIEHNMDVIKQADHVIDLGPEGGREGGEI 959 Query: 916 LVSGTPETVAECEASHTARFLKPML 940 L G PE +AE +HT+ +L+ L Sbjct: 960 LFEGRPEALAEA-DTHTSAYLREEL 983 Score = 80.8 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 38/122 (31%), Positives = 59/122 (48%), Gaps = 6/122 (4%) Query: 609 PEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIA 668 + + L GAR NNL+ + L +P +TG+SGSGKS+L DT+F QR+ + A Sbjct: 1 MPEHITLRGARENNLQAIDLDIPRNRLVVVTGLSGSGKSSLAFDTIFAEGQRRYMESLSA 60 Query: 669 EPAPYRDIQGLEHFD------KVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESR 722 + ++ D VI I+Q + PRS T T V+ +R L+A + Sbjct: 61 YARQFLEMMERPEIDYVDGLSPVISIEQKTVSGNPRSTVGTVTEVYDFLRLLYARAATAY 120 Query: 723 AR 724 + Sbjct: 121 SH 122 >UniRef50_Q1PVF8 Strongly similar to exinuclease ABC, protein A n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1PVF8_9BACT Length = 941 Score = 1033 bits (2670), Expect = 0.0, Method: Composition-based stats. Identities = 412/960 (42%), Positives = 588/960 (61%), Gaps = 43/960 (4%) Query: 2 DKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYA 61 I G R HNLKNI++ IP +KL+V+TG+SGSGKSSLAFDTL+AEGQRRYVES SAYA Sbjct: 3 HSIVACGIRVHNLKNIDVEIPHNKLVVITGVSGSGKSSLAFDTLFAEGQRRYVESFSAYA 62 Query: 62 RQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCP 121 RQFL M+KPDVDHIEG+ PAI+I+QK+ N RSTVGT TEI+DYLRLL+AR+G+ C Sbjct: 63 RQFLEKMDKPDVDHIEGILPAIAIQQKNPVKNRRSTVGTATEINDYLRLLYARIGKTYCK 122 Query: 122 DHDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARIDG 181 + TVS +V+ +LS PEG + ++ P+ +K + + L +G +R D Sbjct: 123 SCKRQVRIDTVSHIVEFILSLPEGTKFLVTFPLNISQKISGEEQINLLKERGIVRILADN 182 Query: 182 EVCDLSDPP-KLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVAD---- 236 ++ D+++ +++ T+ ++DR V+ + RL +S ET+ + G + Sbjct: 183 DIVDITNEQNSFDIRAAKTVYGIIDRLVVKYTIKDRLIDSLETSYRMGSGHLSIFYTNDA 242 Query: 237 ---------------MDDPKAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCD 281 + D E+ +S F C C E P LFSFNNP GACP C Sbjct: 243 LSSEAIKPSTDDLVRIQDSPWVEMKYSKKFFCSYCAIEYPEPSPALFSFNNPIGACPKCQ 302 Query: 282 GLGVQQYFDPDRVIQNPELSLAGGAIRGWDRRNFYY-FQMLKSLADHYKFDVEAPWGSLS 340 G G D D VI + E SL GAI W+ + ++ L+S A Y ++ P+ L+ Sbjct: 303 GFGHTIDIDMDAVIPDKEKSLEQGAIVPWNTPAYRELYEELESAASKYDIPMDVPFRKLT 362 Query: 341 ANVHKVVLYGSGKENIEFKYMNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKF 400 ++ G+ F G+ VR L+K+ Sbjct: 363 KKQLNLLFEGTKD--------------------FCGINEFFNWLEGRKYKIHVRVILSKY 402 Query: 401 ISNRPCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKIL 460 C +CEGTRL++EA + ++ + + M+I A FF L+L+ IA IL Sbjct: 403 RGYNVCRTCEGTRLKKEALTIVIQQRSIAEVCTMTIEQAHMFFQKLQLSDYERNIAHLIL 462 Query: 461 KEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLH 520 +EI RL +++ VGL YLTL R TLSGGEAQR+ L + +G+ LV +Y+LDEPS+GLH Sbjct: 463 QEITKRLGYMIKVGLGYLTLDRMTRTLSGGEAQRVNLTTSLGSSLVNTLYILDEPSVGLH 522 Query: 521 QRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAI 580 RD +RL+ L LRD+GNTV+VVEHD + I+ +D +ID+GPGAG +GG +V G + Sbjct: 523 PRDTDRLIHILTRLRDIGNTVVVVEHDAEVIKNSDMIIDLGPGAGENGGRLVYHGTFAQL 582 Query: 581 MAVPESLTGQYMSGKRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITG 640 A SLTGQY+ G++ I++P R + K + L GA NNLK++ +T P+ + C+TG Sbjct: 583 PANNCSLTGQYLKGEKAIKIPSSRRKPS-RKAIVLKGASQNNLKNIDVTFPLNMLVCVTG 641 Query: 641 VSGSGKSTLINDTLFPIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSN 700 VSGSGKSTL+ DTL+ +++L G + I+G + ++ +DQSPIGRTPRSN Sbjct: 642 VSGSGKSTLVQDTLYGALKKKL-GIYSGFVGKHTAIEGERFINDILLVDQSPIGRTPRSN 700 Query: 701 PATYTGVFTPVRELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIY 760 P TY +F +R+LFA E++AR T G FSFN+ GGRCE C+G G +KV+M FL DI+ Sbjct: 701 PVTYIKIFDEIRKLFAFTREAKARKLTIGSFSFNIAGGRCEFCEGAGYVKVDMQFLADIF 760 Query: 761 VPCDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTY 820 V C++C GKR+N++ LE+KYK K IHEVL +T++EA EFF + + L+ L + GL Y Sbjct: 761 VTCEKCGGKRFNKKVLEVKYKNKNIHEVLSITVDEAIEFFRESVNITKVLKCLQETGLGY 820 Query: 821 IRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRD 880 ++LGQ ATTLSGGEAQR+K++ +S+ L++ DEPT GLH DIQ+LL+ +L Sbjct: 821 LKLGQPATTLSGGEAQRLKVSTYISQENMESMLFVFDEPTIGLHMDDIQKLLNCFQRLLQ 880 Query: 881 QGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLKPML 940 G++++V+EHNLD+IK++D+I+DLGPEGG+ GG ++ GTPE +++ + SHT +LKP Sbjct: 881 AGHSLIVVEHNLDIIKSSDYIIDLGPEGGNEGGYVIGCGTPEKISKIKTSHTGAYLKPYF 940 >UniRef50_B6YRR0 Excinuclease ABC subunit A n=1 Tax=Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 RepID=B6YRR0_AZOPC Length = 943 Score = 1032 bits (2668), Expect = 0.0, Method: Composition-based stats. Identities = 447/937 (47%), Positives = 633/937 (67%), Gaps = 10/937 (1%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 63 I+++GAR HNLKNIN+ IPR+ V+TGLSGSGKSSLAFDTL+ EGQRRY+++ S YAR Sbjct: 10 IDIQGARVHNLKNINVTIPRNSFTVITGLSGSGKSSLAFDTLFVEGQRRYIDTFSVYARS 69 Query: 64 FLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCPDH 123 FL +E+PDVD I GLSP ISIEQK+T+ +PRSTVGT+TEI+DYLRLLFARVGE Sbjct: 70 FLHNVERPDVDRITGLSPVISIEQKTTNRSPRSTVGTMTEIYDYLRLLFARVGEAYSYIS 129 Query: 124 DVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARIDGEV 183 + T +++ ++S+ GK++ LL+PI+K RKG + + E A +G++ RIDG++ Sbjct: 130 GEKMVKYTEEHILELIISRYNGKKVYLLSPIVKNRKGHYRELFEQFAKRGFLNVRIDGKL 189 Query: 184 CDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVADMDDPKAE 243 ++ +L+ K H++EVV+D+ + D +R+ +S TA+ S G +V +++ Sbjct: 190 KEIIPALRLDRYKYHSVEVVIDKLLITDKDKKRIKKSVYTAMNYSDGLLMVLELE--SGN 247 Query: 244 ELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPELSLA 303 FS + CP G S + P FSFN+P GAC C G G D + ++ +PELS+ Sbjct: 248 VSYFSRHLMCPSTGLSYNDPAPHNFSFNSPHGACSKCKGTGQINEIDKNLIMPHPELSIY 307 Query: 304 GGAIRGWDR-RNFYYFQMLKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKENIEFKYMN 362 G I + R F L+ Y D+ S ++ G E I Sbjct: 308 QGGIAPLGKYREILIFNQLEITLKKYGIDLHTSLKDFSEEAINDIMNGV-TEQISIHSDA 366 Query: 363 DRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGTRLRREARHVY 422 +++ FEG+ + + ++ S + + KFI+ C C G RL +EA H Sbjct: 367 AYSNSNHCLSSFEGIYKYILIQKEQGSSRSATQWATKFITTAICPECNGQRLNKEALHYR 426 Query: 423 VENTPLPAISDMSIGHAMEFFN--NLKLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTL 480 + + ++ + I + N L L + +IA +ILKEI R +FL+N+GLNYLTL Sbjct: 427 INGKNIADLTSLEIPELFNWINTTELCLNKYQKQIAIEILKEIRTRTQFLLNIGLNYLTL 486 Query: 481 SRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNT 540 +RS+ +LSGGE QRIRLA+QIG+ LV V+Y+LDEPSIGLHQRDN RL+G L LRD+GN+ Sbjct: 487 NRSSASLSGGEGQRIRLATQIGSQLVNVLYILDEPSIGLHQRDNIRLIGALKQLRDIGNS 546 Query: 541 VIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEV 600 VIVVEHD++ I AD+++++GP AG GGE+V G E ++ +LT Y+S K+ I + Sbjct: 547 VIVVEHDKEMIMNADYIVELGPKAGKLGGEIVFTGTPEELLK-KNTLTASYISEKKNILI 605 Query: 601 PKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQR 660 KKR +K + L GA GNNLK+V + P+G F CITGVSGSGKSTLIN+TL PI + Sbjct: 606 SKKRK--GNKKNIFLKGASGNNLKNVDIIFPLGKFICITGVSGSGKSTLINETLQPIISQ 663 Query: 661 QLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPE 720 +L + + EP PY+ I+G+E+ DK++++DQSPIGRT RSNPATY G+F+ +R LF + E Sbjct: 664 KLYNS-LKEPLPYQSIEGIENLDKIVNVDQSPIGRTFRSNPATYIGIFSEIRNLFTELTE 722 Query: 721 SRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKY 780 S+ +GY PG FSFN++GGRCE C+G+G +EM+FLP++YVPC+QC+GKRYN+ L I Y Sbjct: 723 SKIKGYKPGHFSFNIKGGRCEVCKGNGYKTIEMNFLPNVYVPCEQCQGKRYNQAILGILY 782 Query: 781 KGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKL 840 KGK+I +VL+MTI +A EFF P++ K++ L +VGL YI LGQ +TTLSGGE+QR+KL Sbjct: 783 KGKSIADVLNMTINQAIEFFKYFPSINNKIKVLQEVGLGYICLGQPSTTLSGGESQRIKL 842 Query: 841 ARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADW 900 A ELSK+ TG+TLYILDEPTTGLHF DI+ LL+V+++L ++ NT+++IEHN++VIK+AD+ Sbjct: 843 ATELSKQDTGKTLYILDEPTTGLHFEDIRVLLEVINRLVNRKNTVIIIEHNMEVIKSADY 902 Query: 901 IVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLK 937 ++D+GPEGG GGEIL +GTPE + + + +T+ F + Sbjct: 903 VIDMGPEGGRDGGEILFAGTPEQLIQSKKGYTSHFFR 939 Score = 97.8 bits (242), Expect = 2e-18, Method: Composition-based stats. Identities = 35/122 (28%), Positives = 59/122 (48%), Gaps = 7/122 (5%) Query: 2 DKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYA 61 I ++GA +NLKN++++ P K I +TG+SGSGKS+L +TL ++ SL Sbjct: 614 KNIFLKGASGNNLKNVDIIFPLGKFICITGVSGSGKSTLINETLQPIISQKLYNSLK--- 670 Query: 62 RQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCP 121 + ++ IE L ++++Q RS T I +R LF + E + Sbjct: 671 ----EPLPYQSIEGIENLDKIVNVDQSPIGRTFRSNPATYIGIFSEIRNLFTELTESKIK 726 Query: 122 DH 123 + Sbjct: 727 GY 728 Score = 87.4 bits (215), Expect = 3e-15, Method: Composition-based stats. Identities = 43/120 (35%), Positives = 61/120 (50%), Gaps = 6/120 (5%) Query: 608 NPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATI 667 + + GAR +NLK++ +T+P FT ITG+SGSGKS+L DTLF QR+ Sbjct: 5 KNTACIDIQGARVHNLKNINVTIPRNSFTVITGLSGSGKSSLAFDTLFVEGQRRYIDTFS 64 Query: 668 AEPAPYRDIQGLEHFDK------VIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPES 721 + D+ VI I+Q R+PRS T T ++ +R LFA V E+ Sbjct: 65 VYARSFLHNVERPDVDRITGLSPVISIEQKTTNRSPRSTVGTMTEIYDYLRLLFARVGEA 124 >UniRef50_Q30RE0 Excinuclease ABC subunit A n=21 Tax=Campylobacterales RepID=Q30RE0_SULDN Length = 942 Score = 1031 bits (2666), Expect = 0.0, Method: Composition-based stats. Identities = 474/951 (49%), Positives = 634/951 (66%), Gaps = 29/951 (3%) Query: 2 DKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYA 61 D I++ GAR +NLKNI+L IP+++L+V TGLSGSGKS+LAFDTLYAEGQRRY+ESLS+YA Sbjct: 5 DVIKIVGARENNLKNISLEIPKNQLVVFTGLSGSGKSTLAFDTLYAEGQRRYMESLSSYA 64 Query: 62 RQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCP 121 RQFL + KPDVD IEGL+PAI+I+QK+TS NPRSTVGTITEI+DYLRLL+ARVG C Sbjct: 65 RQFLDRVGKPDVDKIEGLTPAIAIDQKTTSKNPRSTVGTITEIYDYLRLLYARVGIQHCH 124 Query: 122 DHDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARIDG 181 + ++ + S ++ V P+G +L+LLAPI+ E+KG + LE+L +GY+RA IDG Sbjct: 125 NCGKEISQMSASDIIGEVAKLPQGAKLVLLAPIVNEKKGTYADVLESLVHKGYVRAMIDG 184 Query: 182 EVCDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVADMDDPK 241 + L + +L KKHTI+VV+DR V + +R+A E AL+ S G + ++ + Sbjct: 185 VMVRLDEEIELSKTKKHTIKVVIDRVVVNEQNKERIAADVEKALKESYGELEIEILNHEE 244 Query: 242 ----AEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQN 297 + +S + AC C S LEP FSFN+P GAC CDGLG++ D D++I + Sbjct: 245 LGLGRSHMHYSEHNACFDCKVSFEPLEPLSFSFNSPKGACKECDGLGLRYALDQDKII-D 303 Query: 298 PELSLAGGAIRG-WDRRNFYYFQMLKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKENI 356 +LS+ GAI+ + YYF LK K D P+ L K +L+G E Sbjct: 304 IDLSVEKGAIKIIYGFNKGYYFTFLKGFCAQNKIDTTIPYSELEEYQKKAILHGGIDE-- 361 Query: 357 EFKYMNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGTRLRR 416 + + + G++ +K+ +ELA ++S + C+ C RL+R Sbjct: 362 ----ASFLWKGHEVKRVWPGIIKIAYDMFKDE------KELADYMSEKKCSVCSSHRLKR 411 Query: 417 EARHVYVENTPLPAISDMSIGHAMEFFNNLK----LAGQRAKIAEKILKEIGDRLKFLVN 472 E+ V V + I DM I + E+F Q A+++ IL EI +RL FL + Sbjct: 412 ESLSVRVAGKGIADILDMPISKSYEWFKEKSNFNYFTDQSAQVSAPILNEIRERLYFLFD 471 Query: 473 VGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLI 532 VGL Y+TL R A T+SGGEAQRIR+ASQIG+GL GV+YVLDEPSIGLH+RD +L+ TL Sbjct: 472 VGLGYITLGRDARTISGGEAQRIRIASQIGSGLTGVLYVLDEPSIGLHERDTLKLIRTLR 531 Query: 533 HLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYM 592 L++ GN+VIVVEHD++ I AD ++DIG GAG GGEVV G L+ + ++LT Y+ Sbjct: 532 SLQEKGNSVIVVEHDKETIENADFIVDIGSGAGKFGGEVVFAGTLDKLKKA-KTLTADYL 590 Query: 593 SGKRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLIND 652 G++KIE +R +K +++ NN+ ++ + +P+ F CITGVSGSGKS+L+ Sbjct: 591 YGRKKIEYFYRR---AQDKFIEIKNVTLNNINNLNVKIPLNNFVCITGVSGSGKSSLMLQ 647 Query: 653 TLFPIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVR 712 TL P A+ LN A +I GLEH DKVI +DQSPIGRTPRSNPATYTG+ +R Sbjct: 648 TLLPTARELLNHARKVNKVAGVEINGLEHVDKVIYLDQSPIGRTPRSNPATYTGLMDEIR 707 Query: 713 ELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYN 772 LF E++ RGYT RFSFNVRGGRCE CQG+G K+EMHFLPDI V CD C G RYN Sbjct: 708 NLFEQTKEAQIRGYTSSRFSFNVRGGRCEKCQGEGENKIEMHFLPDIMVKCDTCNGTRYN 767 Query: 773 RETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSG 832 ++TLE+ YKGK I +VL+M++EEA EFF A+P L + L TL+DVGL YI LGQ+A TLSG Sbjct: 768 QQTLEVYYKGKNISDVLNMSVEEAYEFFKAIPKLNQILSTLVDVGLGYITLGQNAVTLSG 827 Query: 833 GEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNL 892 GEAQR+KL++ELS++ TG+TLYILDEPTTGLHFAD+ +L VLHK + GN++++IEHNL Sbjct: 828 GEAQRIKLSKELSRKDTGKTLYILDEPTTGLHFADVDRLTGVLHKFVELGNSVLIIEHNL 887 Query: 893 DVIKTADWIVDLGPEGGSGGGEILVSGTPETVAEC---EASHTARFLKPML 940 D+IK AD+I+D+GPEGGSGGG I+ G PE VA+ S+T +L L Sbjct: 888 DMIKNADYIIDMGPEGGSGGGLIIAEGNPEEVAKNHKKSGSYTGEYLAKEL 938 >UniRef50_Q83NI8 Excinuclease ABC subunit A n=2 Tax=Tropheryma whipplei RepID=Q83NI8_TROW8 Length = 948 Score = 1025 bits (2650), Expect = 0.0, Method: Composition-based stats. Identities = 460/964 (47%), Positives = 642/964 (66%), Gaps = 50/964 (5%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 63 + V+ AR HNLKN+N+ IPR+ + V TGLSGSGKSSLAFDT++AEGQRRY+ESLSAYARQ Sbjct: 8 LRVKNARVHNLKNLNVRIPRNSMTVFTGLSGSGKSSLAFDTIFAEGQRRYIESLSAYARQ 67 Query: 64 FLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCPDH 123 FL +++P+VD I+GLSP+++I+QK+TS NPRSTVGT+TEI DYLRLL+ARVG CP+ Sbjct: 68 FLERLDRPEVDSIDGLSPSVAIDQKTTSRNPRSTVGTVTEIFDYLRLLWARVGVLHCPEC 127 Query: 124 DVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARIDGEV 183 D+P+ QT+ Q+VD++ P G+R MLL+P+++++KGE L + G+ R +D E+ Sbjct: 128 DLPVQKQTIQQIVDSIAKIPHGERFMLLSPLVRQKKGEFVDLFSRLTTSGFSRVVVDEEI 187 Query: 184 CDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVADMDDPKAE 243 L++ PKL+ +HTI+VVVDR D++ RL +S ETA G + + ++ K + Sbjct: 188 YLLTEVPKLKKNSRHTIKVVVDRLVSEDNMLTRLTDSIETAF----GLSNICEVQTFKGD 243 Query: 244 ELLFSANFACPICGY-SMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPELSL 302 FS N ACP + + ++EPR FSFN+P GACP CDG+G + + ++ + +LS+ Sbjct: 244 VFRFSINSACPNLHFLNFDKIEPRTFSFNSPVGACPDCDGIGTVRSVNMTTLVPDTQLSV 303 Query: 303 AGGAIRGWDRR--NFYYFQMLKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKENIEFKY 360 A+ D++ + + + + +LA + KF + PW L+ V +L+ Sbjct: 304 EKIALDLIDKKIVSKNFMREMSALARNLKFTLNTPWSDLTDYVQNTILH----------- 352 Query: 361 MNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGTRLRREARH 420 + + R + G++ +ER E + L+ ++ N PC SC G RLR + Sbjct: 353 AKNFLLHNTRVRYYTGLVRKIERDVSENSGGS----LSGYLYNSPCRSCSGKRLRASSLC 408 Query: 421 VYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTL 480 V V N + + DM + + FF L + + KI+ IL+EI RL+FL+ +GL YLTL Sbjct: 409 VKVSNKNIIDVCDMPLDGILHFFKALDIPRKFEKISSPILREIISRLEFLIELGLGYLTL 468 Query: 481 SRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNT 540 SRS T+SGGE+QRIRLA+QIG+GL V+YVLDEPSIGLH+RDNE+L+ L++LR+ GNT Sbjct: 469 SRSITTISGGESQRIRLATQIGSGLTEVLYVLDEPSIGLHKRDNEKLIKLLLNLRNRGNT 528 Query: 541 VIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEV 600 +IVVEHDE+ IR++D ++DIGPGAG GG+VV GP+ + SLTG+Y+SG+ + Sbjct: 529 LIVVEHDEETIRSSDWIVDIGPGAGRMGGQVVYSGPVGKM--PSRSLTGKYLSGELMVST 586 Query: 601 PKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQR 660 PKKR ++ + L+GA+ NNLK++T+ P+ F ITGVSGSGKSTL+N L Sbjct: 587 PKKRRVSSCG--ITLSGAKENNLKNITVFFPLKTFIVITGVSGSGKSTLVNSVLCKALSN 644 Query: 661 QLNGATIAEPAPYRD------------------------IQGLEHFDKVIDIDQSPIGRT 696 G T +E + G E+ KV+ IDQ PIGRT Sbjct: 645 ICKGNTPSENNCQDADCTDACTVRNGMQHNEQTVRLAPALDGAENISKVVHIDQKPIGRT 704 Query: 697 PRSNPATYTGVFTPVRELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFL 756 PRSN ATYTGVF +R++F+ P +RARGY+PGRFSFN++GGRCE C+GDG IK+EM+FL Sbjct: 705 PRSNLATYTGVFDKIRDIFSKTPTARARGYSPGRFSFNLKGGRCEKCKGDGCIKIEMNFL 764 Query: 757 PDIYVPCDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDV 816 PD+YV C+ C G RYNR+TL++ Y +IH+VL M + EA EFF A+P++ + L+ + ++ Sbjct: 765 PDVYVDCEDCNGMRYNRDTLQVLYNNMSIHDVLTMPVCEAVEFFRAIPSIHQPLKLMDEI 824 Query: 817 GLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLH 876 GL Y+ LGQ A TLSGGEAQR+KLA +L KR LY+LDEPTTGLHF D++QLL++LH Sbjct: 825 GLGYMTLGQPAPTLSGGEAQRIKLAAQLQKRTAQDVLYVLDEPTTGLHFHDVRQLLEILH 884 Query: 877 KLRDQGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFL 936 +L D GNT++VIEHNLDVIKTAD ++D+GPEGG+ GG ++ GTPE VA S T FL Sbjct: 885 RLVDNGNTVIVIEHNLDVIKTADHVIDMGPEGGNAGGSVVACGTPEEVALHPDSATGYFL 944 Query: 937 KPML 940 K L Sbjct: 945 KKCL 948 Score = 82.7 bits (203), Expect = 7e-14, Method: Composition-based stats. Identities = 38/120 (31%), Positives = 59/120 (49%), Gaps = 6/120 (5%) Query: 606 PANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGA 665 ++ L++ AR +NLK++ + +P T TG+SGSGKS+L DT+F QR+ + Sbjct: 1 MSSRRSFLRVKNARVHNLKNLNVRIPRNSMTVFTGLSGSGKSSLAFDTIFAEGQRRYIES 60 Query: 666 TIAEPAPYRDIQGLEHFDKV------IDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVP 719 A + + D + + IDQ R PRS T T +F +R L+A V Sbjct: 61 LSAYARQFLERLDRPEVDSIDGLSPSVAIDQKTTSRNPRSTVGTVTEIFDYLRLLWARVG 120 >UniRef50_C2NRS3 Excinuclease ABC, A subunit n=2 Tax=Bacillus cereus group RepID=C2NRS3_BACCE Length = 1274 Score = 1021 bits (2641), Expect = 0.0, Method: Composition-based stats. Identities = 440/954 (46%), Positives = 626/954 (65%), Gaps = 18/954 (1%) Query: 1 MDKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAY 60 +DKI + GAR HNLKNINL IP+++L+V TG+SGSGKS+L FDT++AE QRR+V LS Y Sbjct: 320 LDKILIEGARHHNLKNINLSIPKNRLVVFTGVSGSGKSTLVFDTIFAEAQRRFVVGLSPY 379 Query: 61 ARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRC 120 R++L +E+P +D I GLSPAI+IEQKS S+NPRSTVGTITEI YLRLL++RVG P C Sbjct: 380 VRKYLDKVERPKLDSIYGLSPAIAIEQKSVSNNPRSTVGTITEISSYLRLLYSRVGIPEC 439 Query: 121 PDHDVPLAAQTVSQMVDNVLS-QPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARI 179 + QT + ++ S P + L APII + + N+ +GY + RI Sbjct: 440 IKCGTTIYPQTPRDIASSIYSYLPSNREFKLYAPIIIDSYVDSEYMFTNIRKEGYTQIRI 499 Query: 180 DGEVCDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALE-----LSGGTAVV 234 + E+ + D + K +I++V + F++ + L E F L L T Sbjct: 500 NQELKSIDDIEFINSDKAVSIDLVGETFRIPNKLEGFKKEEFINKLTNAIKVLQKVTKHT 559 Query: 235 ADMDDPKAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRV 294 +++ + +LF+ CP C EL + FSFN P G CP C+GLGV+Q DP+ + Sbjct: 560 LNIETEDNQIILFTTELLCPSCHSGFPELSSQHFSFNTPLGMCPDCNGLGVRQNIDPNLL 619 Query: 295 IQNPELSLAGGAIRGWDR-----RNFYYFQMLKSLADHYKFDVEAPWGSLSANVHKVVLY 349 ++NP LS+ GA+R + + + L + HY D+E PW L + H V+ Y Sbjct: 620 VENPNLSILDGALRWFGNLREGNKTTWPTGPLDVVYKHYNLDIETPWKDLPESFHNVIFY 679 Query: 350 GSGKENIEFKYMNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASC 409 GSGKE I+++ +T P +G++ + R Y ETES +++ ++ PC+SC Sbjct: 680 GSGKEKIKYQSALGLKETL---KPVKGLIPEISRLYYETESEITKKKYGSYMKTAPCSSC 736 Query: 410 EGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNL--KLAGQRAKIAEKILKEIGDRL 467 +GTRL EAR V + + ++ + I A+++ ++ L +I E+++ E+ +RL Sbjct: 737 KGTRLCVEARSVRLGGKTISEVNALPINEALDWIKSVYENLDDTLMEIGEELIIEVYNRL 796 Query: 468 KFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERL 527 FL++VGL+YLT++R+A TLSGGE QR+RLASQ+ +G+VGV+YVLDEPS+GLH +D + L Sbjct: 797 SFLIDVGLHYLTINRTAPTLSGGEGQRVRLASQLSSGMVGVLYVLDEPSVGLHPKDIQSL 856 Query: 528 LGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESL 587 L TL+ LRD GN+VIVV+H+E+ +R AD +IDIGP AGV GGEV+++G +M SL Sbjct: 857 LKTLLKLRDQGNSVIVVDHEEEIMRNADWLIDIGPKAGVLGGEVMSQGDPGHVMNDSNSL 916 Query: 588 TGQYMSGKRKIEVPKKRVPAN-PEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGK 646 TG+Y+SG+ + P + P L L GA NNL +VT P+G FTC+TG+SGSGK Sbjct: 917 TGKYLSGELTVHAPSWHLKREAPTDWLTLKGASQNNLNNVTANFPLGRFTCVTGLSGSGK 976 Query: 647 STLINDTLFPIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTG 706 S+LI +TL P+ ++ LN + + +P Y +I G+E + VI++ Q+PIGRTPRSNPATYT Sbjct: 977 SSLIGETLEPLLEKILNNSDV-KPGVYEEIIGVEKLENVINVSQAPIGRTPRSNPATYTN 1035 Query: 707 VFTPVRELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQC 766 +F +R +F+ ++ + FSFN GRCE CQG G +KVEMHFL D+++ C++C Sbjct: 1036 LFNKIRRVFSNTKDAMDNWLSYDHFSFNSAKGRCENCQGQGQVKVEMHFLADVWITCNEC 1095 Query: 767 KGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQS 826 KGKR+ E L +K KGK I +VL+M + EA E+F + R LQT DVGL YI+LGQS Sbjct: 1096 KGKRFKPEVLAVKRKGKNISDVLNMDVNEAIEYFKEHKDIVRILQTFCDVGLDYIKLGQS 1155 Query: 827 ATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIV 886 ATTLSGGEAQRVKLARELSK+ G+ +YILDEPTTGLHF DIQ LL++LH+L D+G+T++ Sbjct: 1156 ATTLSGGEAQRVKLARELSKKTKGKMIYILDEPTTGLHFNDIQYLLNILHRLVDEGHTVI 1215 Query: 887 VIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLKPML 940 VIEH+LDVIKTADWI++LGPEGG GG+I+ +PE + + S+T + L+ ++ Sbjct: 1216 VIEHDLDVIKTADWIIELGPEGGKAGGDIIAQCSPEELIAVKESYTGQALRRLM 1269 Score = 184 bits (466), Expect = 2e-44, Method: Composition-based stats. Identities = 75/197 (38%), Positives = 112/197 (56%), Gaps = 15/197 (7%) Query: 405 PCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIG 464 C C+G R + E V + + + +M + A+E+F K+I Sbjct: 1091 TCNECKGKRFKPEVLAVKRKGKNISDVLNMDVNEAIEYFKE--------------HKDIV 1136 Query: 465 DRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGV-MYVLDEPSIGLHQRD 523 L+ +VGL+Y+ L +SA TLSGGEAQR++LA ++ G +Y+LDEP+ GLH D Sbjct: 1137 RILQTFCDVGLDYIKLGQSATTLSGGEAQRVKLARELSKKTKGKMIYILDEPTTGLHFND 1196 Query: 524 NERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAV 583 + LL L L D G+TVIV+EHD D I+ AD +I++GP G GG+++A+ E ++AV Sbjct: 1197 IQYLLNILHRLVDEGHTVIVIEHDLDVIKTADWIIELGPEGGKAGGDIIAQCSPEELIAV 1256 Query: 584 PESLTGQYMSGKRKIEV 600 ES TGQ + K+ V Sbjct: 1257 KESYTGQALRRLMKLNV 1273 >UniRef50_B8DJB0 Excinuclease ABC, A subunit n=2 Tax=Desulfovibrio RepID=B8DJB0_DESVM Length = 1131 Score = 1017 bits (2629), Expect = 0.0, Method: Composition-based stats. Identities = 456/990 (46%), Positives = 626/990 (63%), Gaps = 62/990 (6%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 63 I + GAR HNLKN+ L IPRD+L+VV G SGSGKS+LAFD +YAEGQRRYVESLSAYARQ Sbjct: 6 IHIEGARQHNLKNVTLDIPRDELVVVCGPSGSGKSTLAFDIVYAEGQRRYVESLSAYARQ 65 Query: 64 FLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCPDH 123 FL M+KP+V+ IEGLSPAIS+EQ++ + NPRSTVGT+TE++D+LR+ +AR+G CP Sbjct: 66 FLPQMDKPEVEKIEGLSPAISLEQQTATRNPRSTVGTVTEVYDFLRVFWARLGRMYCPQC 125 Query: 124 DVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARIDGEV 183 +P+ A+ +++ ++L+ EG R ++LAP+++ +KG H + L ++G++R R++G + Sbjct: 126 GLPIEARAADEIIADILALGEGTRCIVLAPLVEYQKGTHIDRFKKLKAEGFVRVRVNGAI 185 Query: 184 CDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVADMDDPK-- 241 + + P L+ +KHTI++VVDR ++D + RLA+S E AL G VV + Sbjct: 186 MGIDEVPALDKNRKHTIDLVVDRLVIKDGIRGRLADSVELALRYGDGRLVVHLPAEGTGG 245 Query: 242 --------------AEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQ 287 +++ S CP+C S+ P+LFSFN+P GACP C GLG + Sbjct: 246 KDGKDAGDGKGGNAGRDIVHSTESVCPVCRISLPAPSPQLFSFNSPQGACPRCLGLGSVE 305 Query: 288 YFDPDRVIQNPELSLAGGAIRGWDRRN--FYYFQMLKSLADHYKFDVEAPWGSLSANVHK 345 YF+P V N LSL GA+ W + L +L + F + P + SA+ Sbjct: 306 YFEPALVAPNRGLSLNTGALLPWKNTKLFERHRDALTALGKRWGFTLSTPLAAYSADALD 365 Query: 346 VVLYGSGKENIEFKYMNDRGDTS------------------------------------- 368 + +G ++ Sbjct: 366 ALFHGETEDGRPAGRGAGSNLRRNWLGGSVVVGGNGNGENAGNGHDHGPALPVTPAAANG 425 Query: 369 --IRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGTRLRREARHVYVENT 426 + + GV+ +E+ + A RE L+++ + C C G RLR E+ V V++ Sbjct: 426 GAVTADRWPGVVSILEQGMQ--YGDAWRELLSRYRQSMACPVCSGARLRPESLSVRVDSL 483 Query: 427 PLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTLSRSAET 486 + MS+ A+++ + G+ A +AE ++KE+ RL+F+VNVGL+Y+ L R+ T Sbjct: 484 NIHEFCSMSVARALDWLRERRFEGRHALVAEPLMKELHHRLEFMVNVGLDYIALGRNMAT 543 Query: 487 LSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEH 546 LSGGEAQRIRLASQ+G+GLVGV YVLDEPSIGLH RDNERL+ TL L+ GNTV+VVEH Sbjct: 544 LSGGEAQRIRLASQLGSGLVGVTYVLDEPSIGLHPRDNERLIKTLRSLQRRGNTVLVVEH 603 Query: 547 DEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEVPKKRVP 606 DE IR AD VI++GPG+G GGEVV GP++ +++ +SLT QY+ G I R Sbjct: 604 DEATIREADTVIELGPGSGALGGEVVFNGPVDTLLSSSQSLTAQYLRGDMAIAR--PRAR 661 Query: 607 ANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGAT 666 P + L G NNL+ + +P+GL TC+TGVSGSGKS+L+ DTL+ G Sbjct: 662 RAPRGWMTLHGVTTNNLQGIDCRVPLGLLTCVTGVSGSGKSSLVMDTLYKHLA-LAQGIR 720 Query: 667 IAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESRARGY 726 + +P I+G E ++++ IDQ+PIGRTPRSNPATYT +F +R +FA P++R RGY Sbjct: 721 VDQPGTIEGIEGAETIERIVSIDQTPIGRTPRSNPATYTKIFDEIRGIFAMTPDARKRGY 780 Query: 727 TPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKYKGKTIH 786 PGRFSFNVRGGRCEAC GDG I+VEMHFLPD+YV CD CKG+RYN ETLE++YKG I Sbjct: 781 KPGRFSFNVRGGRCEACGGDGQIRVEMHFLPDVYVTCDVCKGRRYNHETLEVRYKGLNIA 840 Query: 787 EVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSK 846 EVLD+T+ +AR+FF+ P L R+L L DVGL Y+RLGQ ATTLSGGEAQR+K++REL K Sbjct: 841 EVLDLTVRQARQFFENYPVLERRLGVLEDVGLEYLRLGQPATTLSGGEAQRIKISRELGK 900 Query: 847 RGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADWIVDLGP 906 R T+YILDEPTTGLH ++ +L+ VL++L D+G T+ VIEHN DVI +D +VDLGP Sbjct: 901 RSLPGTMYILDEPTTGLHMHEVGKLITVLNQLVDRGATVTVIEHNTDVILASDHVVDLGP 960 Query: 907 EGGSGGGEILVSGTPETVAECEASHTARFL 936 GG GG I+ +GTPE + + S T FL Sbjct: 961 GGGENGGRIVSAGTPEEIMDDPHSVTGSFL 990 Score = 172 bits (437), Expect = 5e-41, Method: Composition-based stats. Identities = 68/192 (35%), Positives = 110/192 (57%), Gaps = 15/192 (7%) Query: 760 YVPCDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAV--------------PA 805 + C C G R E+L ++ IHE M++ A ++ Sbjct: 460 SMACPVCSGARLRPESLSVRVDSLNIHEFCSMSVARALDWLRERRFEGRHALVAEPLMKE 519 Query: 806 LARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHF 865 L +L+ +++VGL YI LG++ TLSGGEAQR++LA +L G T Y+LDEP+ GLH Sbjct: 520 LHHRLEFMVNVGLDYIALGRNMATLSGGEAQRIRLASQLGSGLVGVT-YVLDEPSIGLHP 578 Query: 866 ADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVA 925 D ++L+ L L+ +GNT++V+EH+ I+ AD +++LGP G+ GGE++ +G +T+ Sbjct: 579 RDNERLIKTLRSLQRRGNTVLVVEHDEATIREADTVIELGPGSGALGGEVVFNGPVDTLL 638 Query: 926 ECEASHTARFLK 937 S TA++L+ Sbjct: 639 SSSQSLTAQYLR 650 Score = 169 bits (427), Expect = 6e-40, Method: Composition-based stats. Identities = 77/206 (37%), Positives = 112/206 (54%), Gaps = 15/206 (7%) Query: 403 NRPCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKE 462 C C+G R E V + + + D+++ A +FF N + Sbjct: 814 YVTCDVCKGRRYNHETLEVRYKGLNIAEVLDLTVRQARQFFENYPV-------------- 859 Query: 463 IGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIG-AGLVGVMYVLDEPSIGLHQ 521 + RL L +VGL YL L + A TLSGGEAQRI+++ ++G L G MY+LDEP+ GLH Sbjct: 860 LERRLGVLEDVGLEYLRLGQPATTLSGGEAQRIKISRELGKRSLPGTMYILDEPTTGLHM 919 Query: 522 RDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIM 581 + +L+ L L D G TV V+EH+ D I A+DHV+D+GPG G +GG +V+ G E IM Sbjct: 920 HEVGKLITVLNQLVDRGATVTVIEHNTDVILASDHVVDLGPGGGENGGRIVSAGTPEEIM 979 Query: 582 AVPESLTGQYMSGKRKIEVPKKRVPA 607 P S+TG ++ + P +P Sbjct: 980 DDPHSVTGSFLVQEHATRHPGVPMPR 1005 Score = 75.8 bits (185), Expect = 8e-12, Method: Composition-based stats. Identities = 35/116 (30%), Positives = 55/116 (47%), Gaps = 6/116 (5%) Query: 610 EKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAE 669 + + + GAR +NLK+VTL +P + G SGSGKSTL D ++ QR+ + A Sbjct: 3 KPCIHIEGARQHNLKNVTLDIPRDELVVVCGPSGSGKSTLAFDIVYAEGQRRYVESLSAY 62 Query: 670 PAPYRDIQGLEHFDKV------IDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVP 719 + +K+ I ++Q R PRS T T V+ +R +A + Sbjct: 63 ARQFLPQMDKPEVEKIEGLSPAISLEQQTATRNPRSTVGTVTEVYDFLRVFWARLG 118 >UniRef50_Q6SI25 Excinuclease ABC, A subunit n=1 Tax=uncultured marine bacterium 105 RepID=Q6SI25_9BACT Length = 985 Score = 1016 bits (2627), Expect = 0.0, Method: Composition-based stats. Identities = 444/981 (45%), Positives = 600/981 (61%), Gaps = 64/981 (6%) Query: 3 KIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYAR 62 +I ++GARTHNLK I+L + +++L+V+TG+SGSGKSSLAFDTLYAEGQRRYVESLSAYAR Sbjct: 11 QIIIQGARTHNLKGIDLTLSKNQLVVITGVSGSGKSSLAFDTLYAEGQRRYVESLSAYAR 70 Query: 63 QFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCPD 122 QFL MEKPDVD I+G+SPAI+I QK++ NPRSTVGT TEI+DYLRLLFAR G+ C Sbjct: 71 QFLERMEKPDVDRIDGISPAIAIRQKNSIRNPRSTVGTTTEINDYLRLLFARAGQTICRQ 130 Query: 123 HDVPLAAQTVSQMVDNVLSQPEGKRLMLLA--PII-----KERKGEH------------- 162 P+ +T + + + L + P++ ++K E Sbjct: 131 CGRPVTRETAEVVAKKLTQLTDVTHLFVGFVMPLVTGAAEVDKKEELPALVEEETTEDGV 190 Query: 163 --------------------TKTLENLASQGYIRARIDGEVCDLSDPPKLELQKKHTIEV 202 T+E L +G+ R +DG D +EV Sbjct: 191 SKVGGSGNGTLESLQAVDLIQATIETLRRKGFGRLYVDGRAVAFKDVNVAAQVNGSILEV 250 Query: 203 VVDRFKVRDDLTQRLAESFETALELSGGTAVVADMDDPKA--EELLFSANFACPICGYSM 260 VVDR KV ++ RL +S E A GGTA V ++D + FS +F C C Sbjct: 251 VVDRIKVAPEMLTRLTDSIEIAYHEGGGTAFVIEVDQAGSGTTRHEFSEHFECRTCDLGY 310 Query: 261 RELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPELSLAGGAIRGWDRRNFYYF-Q 319 +PRLFSFNNP GACPTC G G D + V+ +P S+ AI W + ++ Sbjct: 311 EVPQPRLFSFNNPFGACPTCHGFGNIIELDMNLVVPDPSRSVQQDAIEPWSKPHYRKKLA 370 Query: 320 MLKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKENIEFKYMNDRGDTSIRRHPFEGVLH 379 LK A K ++ PW +S + ++ G G+ ++G+ Sbjct: 371 DLKRAARVQKISLDVPWEEMSDQDRQFIIEGDGQ-------------------GYDGIRG 411 Query: 380 NMERRYKETESSAVREELAKFISNRPCASCEGTRLRREARHVYVENTPLPAISDMSIGHA 439 R ++ +R L+++ C C GTRLR EAR V V+ + I +++ Sbjct: 412 FFRRLERKKYKVHIRVFLSRYRGYLKCPDCAGTRLRPEARDVQVDGRTIDQICALTVSEG 471 Query: 440 MEFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLAS 499 FF+NL L + I E++L EI RL FL +VGL+YLTL R + TLSGGEAQRI LA+ Sbjct: 472 AVFFSNLALDDRENAIVERVLNEIQKRLTFLGDVGLDYLTLDRLSSTLSGGEAQRINLAT 531 Query: 500 QIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVID 559 +G+ LVG +YVLDEPSIGLH RDN+RL+ L LRD GNTV+VVEHD D IR ADHV+D Sbjct: 532 SLGSALVGTLYVLDEPSIGLHPRDNQRLIAILQRLRDQGNTVVVVEHDADMIRVADHVVD 591 Query: 560 IGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEVPKKRVPANPEKVLKLTGAR 619 +G GAG HGG VV GP E ++ SLT +Y+ + I +P+KR +K+ ++ GA Sbjct: 592 LGLGAGDHGGSVVFTGPFEELLVQKRSLTAKYLRDELAIPIPQKRRKLREQKL-RVFGAS 650 Query: 620 GNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAEPAPYRDIQGL 679 +NL+D+ + +P+ + TC+TGVSGSGKSTL++D L+ +R + G+ +R I+G Sbjct: 651 EHNLQDIDVEIPLNMLTCVTGVSGSGKSTLVHDVLYAGLKR-IKGSWDKPIGAHRAIEGA 709 Query: 680 EHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESRARGYTPGRFSFNVRGGR 739 E D V IDQ+PIGRTPRSNP TY F P+R L A +++A TP FSFNV GGR Sbjct: 710 ELLDDVALIDQAPIGRTPRSNPVTYLKAFDPIRALLASTKDAKALALTPSHFSFNVPGGR 769 Query: 740 CEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREF 799 C+ C+G GV++VEM FL D++VPCDQC G RY + LE+KY+G+ + ++L+MT+ E F Sbjct: 770 CDTCEGQGVVRVEMQFLADVFVPCDQCNGARYKPQVLEVKYRGRNVDQILNMTVREGLLF 829 Query: 800 FDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEP 859 F+ + R+LQ L ++GL Y+RLGQ ATTLSGGEAQR+K+A LS G+ +TLYILDEP Sbjct: 830 FNTSQKVLRRLQVLDEIGLGYLRLGQLATTLSGGEAQRIKIASRLSAHGSDRTLYILDEP 889 Query: 860 TTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSG 919 TTGLHF DI +LL KL G+T++VIEHNLDVIK ADWI+DLGPEGG GG+++ +G Sbjct: 890 TTGLHFDDIAKLLTAFRKLLQAGHTLLVIEHNLDVIKMADWIIDLGPEGGLAGGQVVAAG 949 Query: 920 TPETVAECEASHTARFLKPML 940 PE +A+ E SHT R+L+ +L Sbjct: 950 PPEALAKVEHSHTGRYLREVL 970 >UniRef50_C1F8N8 Excinuclease ABC, A subunit n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F8N8_ACIC5 Length = 994 Score = 1010 bits (2611), Expect = 0.0, Method: Composition-based stats. Identities = 459/995 (46%), Positives = 605/995 (60%), Gaps = 76/995 (7%) Query: 2 DKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYA 61 D+I +RGARTHNLKNI+ IP +L VVTG+SGSGKSSLAFDT+YAEGQRRYVESLSAYA Sbjct: 3 DQIVIRGARTHNLKNIDCTIPHGQLTVVTGVSGSGKSSLAFDTVYAEGQRRYVESLSAYA 62 Query: 62 RQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCP 121 RQFL MEKPDVD I+GL+PA++I+QK+T+ NPRSTV T TEI+DYLRLL+AR G C Sbjct: 63 RQFLERMEKPDVDFIDGLAPAVAIKQKNTTRNPRSTVATATEIYDYLRLLYARCGTVHCI 122 Query: 122 DHDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKG--------------------- 160 D + +V ++ VL+ EG RL L P+ ++ Sbjct: 123 VCDGIVKRDSVDEIAAAVLALGEGTRLYALFPVTPAQQAPEAGPESPAAEEAKPPKRPRK 182 Query: 161 ----------------EHTKTLENLASQGYIRARIDGEVCDLSDPPKL-ELQKKHTIEVV 203 + L L +G+ R G + + S P L E+ + V+ Sbjct: 183 TAKKAAAAPAASTLTESLKERLAELRKRGFNRLYQGGNIYEFSTPESLLEIDFTLPVFVL 242 Query: 204 VDRFKVRDDLTQRLAESFETALELSGGTA---VVADMDDPKAEELLFSANFACPICGYSM 260 +DR V + R+ ++ E +G V + + P+ E L FS F C C Sbjct: 243 IDRLVVSPENRARIVDAAEIGYREAGEILYEIVPREGEKPERERLRFSGAFECKTCHRVY 302 Query: 261 RELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPELSLAGGAIRGWDRRNFY-YFQ 319 RE EPRLFSFNNP GACP C G G FD +I + +L GAI W+R + ++ Sbjct: 303 REPEPRLFSFNNPFGACPRCQGFGNTIDFDLALIIPDSAKTLTAGAIDPWNRPKYRPWYA 362 Query: 320 MLKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKENIEFKYMNDRGDTSIRRHPFEGVLH 379 ++ A ++ PW LS +L G G F GV Sbjct: 363 DMRRAAQAQGVPLDVPWRELSEEHQSFILNGQGS--------------------FAGVRG 402 Query: 380 NMERRYKETESSAVREELAKFISNRPCASCEGTRLRREARHVYVENTPLPAISDMSIGHA 439 E+ ++ VR L+K+ C C+G RLR EAR V + + S ++I +A Sbjct: 403 FFEQMERKKYKLHVRVMLSKYRGYAVCPECKGQRLRAEARAVRISGKNICEASALTIRNA 462 Query: 440 MEFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLAS 499 EFF L L + +IA IL E+ RL FL VGL+YLTL R A TLSGGEAQRI+LA+ Sbjct: 463 NEFFGALTLTAMQQEIAGSILDEVRQRLHFLDAVGLDYLTLDRLASTLSGGEAQRIQLAT 522 Query: 500 QIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVID 559 +G+ LVG +YVLDEPSIGLH RD +L+ L +LRDLGNT++VVEHD D IRAAD++ID Sbjct: 523 SLGSRLVGALYVLDEPSIGLHTRDTAKLIRILENLRDLGNTILVVEHDPDVIRAADYLID 582 Query: 560 IGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEVPKKRVP---ANPEKVLKLT 616 +GPGAG GG+++A G ++ + A SLTG+Y+SG I VP+ R N + L+L Sbjct: 583 LGPGAGEFGGKLLAAGTVQQVEANTSSLTGKYLSGTVTIPVPRFRREIDVDNKRQWLRLE 642 Query: 617 GARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAEPAP-YRD 675 GAR NNLK + + +P+ + TCITGVSGSGKSTL+++ L+ + L +P+ YR Sbjct: 643 GARANNLKGIDVQIPLQVLTCITGVSGSGKSTLVHEVLYKVLAYHLGKTETGDPSHLYRA 702 Query: 676 IQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESRARGYTPGRFSFNV 735 + G E + ++ +DQ+PIGRTPRSNP TY F +RELFA PE++ RGY+ G FSFNV Sbjct: 703 VHGAERLNDIVLVDQTPIGRTPRSNPVTYIKAFDAIRELFASQPEAQRRGYSAGYFSFNV 762 Query: 736 RGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEE 795 GGRC+ C+GDG + VEM FL D+ +PC++C G RY LEIKYKGK+IH+VL MT++E Sbjct: 763 PGGRCDVCEGDGTVTVEMQFLADVELPCEECSGSRYKASVLEIKYKGKSIHDVLGMTVKE 822 Query: 796 AREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLAREL----------S 845 A FF P + KL L ++GL Y+RLGQSATTLSGGEAQRVKLA L + Sbjct: 823 ALRFFAGHPKIVDKLAVLEEIGLGYLRLGQSATTLSGGEAQRVKLALHLASVRSSGSSEA 882 Query: 846 KRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADWIVDLG 905 ++ + LYILDEPTTGLHF D+ +LL KL D G ++VVIEHNLD+IK+ADWI+DLG Sbjct: 883 RKAANRILYILDEPTTGLHFEDVSKLLMAFKKLIDGGASLVVIEHNLDIIKSADWIIDLG 942 Query: 906 PEGGSGGGEILVSGTPETVAECEASHTARFLKPML 940 PEGG+GGG+I+ +GTPE + E SHT +L +L Sbjct: 943 PEGGTGGGQIVATGTPEEITRHELSHTGYWLARVL 977 >UniRef50_Q2NJE0 Excinuclease ABC subunit A n=3 Tax=Candidatus Phytoplasma RepID=Q2NJE0_AYWBP Length = 972 Score = 1009 bits (2610), Expect = 0.0, Method: Composition-based stats. Identities = 462/962 (48%), Positives = 631/962 (65%), Gaps = 27/962 (2%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 63 I+VRGAR +NLKNIN+ IP++KL+++TGLSGSGKSSLAFDTLY EG+RRYVESLSAYARQ Sbjct: 9 IKVRGARQNNLKNINIDIPKNKLVIITGLSGSGKSSLAFDTLYQEGKRRYVESLSAYARQ 68 Query: 64 FLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCPDH 123 FL EKP+VD IEGLSP+IS++QK+TS+NPRSTVGTITEI+DYLRL++A + P P+ Sbjct: 69 FLGSFEKPNVDSIEGLSPSISVDQKTTSNNPRSTVGTITEIYDYLRLIYANIAFPFHPEK 128 Query: 124 DVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARIDGEV 183 ++ L QT+ QM++ + +++LAPII+ +KG H KTLE LA G+ R I+ + Sbjct: 129 NIVLEKQTIEQMINKTNQTFPKQLVLILAPIIERKKGTHQKTLEALAKDGFNRVIINDII 188 Query: 184 CDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVADMD----- 238 + D P L + H I VV+DRF+V D RL E+ E AL L+ G + D Sbjct: 189 YLMDDIPSLTKNQYHNIYVVIDRFEVNSDNQTRLFEALEQALNLAQGKVFIMDYKSKNSN 248 Query: 239 --------DPKAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFD 290 + K + L + N+ + + E RLFSFN P GAC C G+G D Sbjct: 249 DSNKDDNKNKKCQILKLNCNYHLEGINFDIPLRESRLFSFNTPLGACQICKGIGKTAEID 308 Query: 291 PDRVIQNPELSLAGGAIRGWDRRNFYYF-----QMLKSLADHYKFDVEAPWGSLSANVHK 345 D ++ + E L AI + N Y Q LK++ +HY+ D+ P + Sbjct: 309 CDMIL-DYEKPLNKDAILIFKSNNEYNNFASKEQELKAVCNHYQIDMTVPLKKIDPQKLN 367 Query: 346 VVLYGSGK-----ENIEFKYMNDRGDTSIRRH-PFEGVLHNMERRYKETESSAVREELAK 399 ++LYGS + F + T + FEG+ ++RR++ET S +++ L+ Sbjct: 368 IILYGSPDQIPLTPPLCFSRFSKNTTTKTLKCDFFEGIASMLKRRFEETTSEWLKKWLSN 427 Query: 400 FISNRPCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKI 459 ++ + C C+G RL + A + N + I+D+SI + FF NL+L+ + KI Sbjct: 428 YMMEKKCKKCQGQRLNQGALLFKINNKNIYEITDLSIEQTLAFFQNLELSKKDTKIINLA 487 Query: 460 LKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGL 519 LKE+ +RL FL +GL YL+LSRS TLSGGE+QRIRLA+QIG+ L GV+YVLDEPSIGL Sbjct: 488 LKEVINRLTFLKEIGLGYLSLSRSVTTLSGGESQRIRLATQIGSQLSGVLYVLDEPSIGL 547 Query: 520 HQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEA 579 HQ+DN+ L+ +L +RDLGN++IVVEHD D + A+D++IDIGP AG+ GG+V A G + Sbjct: 548 HQKDNDLLIKSLKKMRDLGNSLIVVEHDHDTMLASDYLIDIGPQAGIFGGKVQAFGTPQE 607 Query: 580 IMAVPESLTGQYMSGKRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCIT 639 +M SLTG+Y+S K +I+VPK R N + +L +T A NNLK + + P+ +T Sbjct: 608 VMKNKNSLTGKYLSKKIQIKVPKIRRKGNKDHIL-VTKASKNNLKSINVCFPMQQLIVVT 666 Query: 640 GVSGSGKSTLINDTLFPIAQRQLNGATIAEPAPYRDI-QGLEHFDKVIDIDQSPIGRTPR 698 GVSGSGKSTL+ND L Q++ + + + + K+++I Q PIG+TPR Sbjct: 667 GVSGSGKSTLVNDVLLDCLQKKYSKKNKNQQKDFSHLVNDFNKVKKIVEISQDPIGKTPR 726 Query: 699 SNPATYTGVFTPVRELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPD 758 SNP TYTGVF +REL++ E++ +GY GRFSFNV+GGRCE C GDGV K+ MHFLPD Sbjct: 727 SNPLTYTGVFDEIRELYSKTKEAQMKGYQKGRFSFNVKGGRCEVCSGDGVKKISMHFLPD 786 Query: 759 IYVPCDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGL 818 +YV C+ CKG RY +ETL IKYK K I ++L M++EE FF P + +L+ L +VGL Sbjct: 787 VYVMCEACKGTRYQKETLSIKYKDKNIADILAMSVEEGVLFFQNHPKIKHQLEILQNVGL 846 Query: 819 TYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKL 878 YI+LGQS+ TLSGGEAQRVKLA EL K+ LYILDEPTTGLH D++QLL VLH++ Sbjct: 847 GYIKLGQSSPTLSGGEAQRVKLASELHKKVIPGALYILDEPTTGLHSEDVRQLLKVLHQM 906 Query: 879 RDQGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLKP 938 D+ TIVVIEHNLDVIK AD+I+DLGPEGG+ GG ++ +GTPE V++ E S+T ++LK Sbjct: 907 TDKKATIVVIEHNLDVIKNADYIIDLGPEGGACGGYVVATGTPEQVSQNEKSYTGKYLKK 966 Query: 939 ML 940 +L Sbjct: 967 IL 968 Score = 95.1 bits (235), Expect = 1e-17, Method: Composition-based stats. Identities = 42/125 (33%), Positives = 61/125 (48%), Gaps = 7/125 (5%) Query: 2 DKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYA 61 D I V A +NLK+IN+ P +LIVVTG+SGSGKS+L D L Q++Y + Sbjct: 638 DHILVTKASKNNLKSINVCFPMQQLIVVTGVSGSGKSTLVNDVLLDCLQKKYSKKNKNQQ 697 Query: 62 RQFLSLMEK-PDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRC 120 + F L+ V I + I Q PRS T T + D +R L+++ E + Sbjct: 698 KDFSHLVNDFNKVKKI------VEISQDPIGKTPRSNPLTYTGVFDEIRELYSKTKEAQM 751 Query: 121 PDHDV 125 + Sbjct: 752 KGYQK 756 Score = 82.0 bits (201), Expect = 9e-14, Method: Composition-based stats. Identities = 36/117 (30%), Positives = 59/117 (50%), Gaps = 6/117 (5%) Query: 608 NPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATI 667 N + +K+ GAR NNLK++ + +P ITG+SGSGKS+L DTL+ +R+ + Sbjct: 4 NKNQFIKVRGARQNNLKNINIDIPKNKLVIITGLSGSGKSSLAFDTLYQEGKRRYVESLS 63 Query: 668 AEPAPYRDIQGLEHFDKV------IDIDQSPIGRTPRSNPATYTGVFTPVRELFAGV 718 A + + D + I +DQ PRS T T ++ +R ++A + Sbjct: 64 AYARQFLGSFEKPNVDSIEGLSPSISVDQKTTSNNPRSTVGTITEIYDYLRLIYANI 120 >UniRef50_Q01SK3 Excinuclease ABC subunit A n=20 Tax=Bacteria RepID=Q01SK3_SOLUE Length = 929 Score = 1007 bits (2604), Expect = 0.0, Method: Composition-based stats. Identities = 446/958 (46%), Positives = 580/958 (60%), Gaps = 50/958 (5%) Query: 2 DKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYA 61 D I +RGAR HNLKNI+L IP ++L VVTG+SGSGKSSLAFDT+YAEGQRRYVESLSAYA Sbjct: 3 DYIAIRGARVHNLKNISLCIPHNQLTVVTGVSGSGKSSLAFDTIYAEGQRRYVESLSAYA 62 Query: 62 RQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCP 121 RQFL MEKPDVD I+G++PA++I QK+T+ NPRSTV T TE D+LRLL+ARVG+ CP Sbjct: 63 RQFLERMEKPDVDDIDGIAPAVAIRQKNTTRNPRSTVATSTECFDFLRLLYARVGQTFCP 122 Query: 122 DHDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPI-IKERKGEHTKTLENLASQGYIRARID 180 + TV Q+ VL P+G R L P L L +G+ R Sbjct: 123 TCGTRVIKDTVDQVAARVLQYPQGSRWYALFPCGEHASTDALRDHLFELRKKGFNRLFQA 182 Query: 181 GEVCDLSDPPK-LELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVADMDD 239 G + + S P L++ + ++VDR + DL QRL +S E +G V + Sbjct: 183 GRLFEFSTPESLLDIDFTKPLFILVDRIAISPDLHQRLVDSIEICYREAG---EVIFENA 239 Query: 240 PKAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPE 299 E+L F+ F C C EP LFSFN+P GACP C G G FD +RVI +P Sbjct: 240 STGEQLRFNERFQCKTCLMEFNPPEPILFSFNSPFGACPRCQGFGNTIDFDMNRVIPDPG 299 Query: 300 LSLAGGAIRGWDRRNFYYFQMLKSLADHY-KFDVEAPWGSLSANVHKVVLYGSGKENIEF 358 L+L GA+ W + + + L + H K P L+A + Sbjct: 300 LTLDEGAVDPWTKPKYRSW--LGNFKKHRAKVRTNVPVCDLTAAERDTLD---------- 347 Query: 359 KYMNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGTRLRREA 418 E + + + VR L+++ C C G RLR+EA Sbjct: 348 ----------------EFIRRFFDHLETKKYKVHVRVFLSRYRGYALCPDCRGARLRKEA 391 Query: 419 RHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNVGLNYL 478 +V V L I M+I A EFF +L L+ + IAEKIL EI RLKFL +VGL YL Sbjct: 392 LYVRVAGRNLADIVRMNIAEAQEFFLSLSLSPEETAIAEKILVEIRQRLKFLNDVGLEYL 451 Query: 479 TLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLG 538 TL R A TLSGGEAQRI+LA+ +G+ LVG YVLDEPSIGLH RD RL+ L LR LG Sbjct: 452 TLDRLASTLSGGEAQRIQLATSLGSRLVGACYVLDEPSIGLHSRDTGRLIRILEELRGLG 511 Query: 539 NTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKI 598 NT++VVEHD + +R+ADH++D+GPGAG HGGE+V EG L ++ +SLT +Y+ G+ K+ Sbjct: 512 NTIVVVEHDPNVMRSADHIVDLGPGAGEHGGEIVFEGNLPTLIQSGDSLTAKYLRGELKV 571 Query: 599 EVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIA 658 P+ R +P + ++ GAR +NLK+V + +P+G+ +TGVSGSGKSTL++D ++ Sbjct: 572 SAPRVRRTVDPRRTMRFNGARVHNLKNVDVEIPLGMMVVVTGVSGSGKSTLVHDVIYRSL 631 Query: 659 Q----------------RQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPA 702 + G R ++G E + IDQSPIGRTPRSNP Sbjct: 632 EALHKARDARDDGGATAEPELGDAPGPQLMCRKVEGAERISTTVMIDQSPIGRTPRSNPV 691 Query: 703 TYTGVFTPVRELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVP 762 TY F +R LFA ++ RGYT G FSFN+ GGRCE CQGDG + VEM FL D+ + Sbjct: 692 TYIKAFELIRALFASTRDAEKRGYTAGHFSFNIPGGRCETCQGDGTVTVEMQFLADVELM 751 Query: 763 CDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIR 822 C++CKG RY LEIKY G+ IHEVL +T+ EA +FF A P L ++L+ L DVGL Y+R Sbjct: 752 CEECKGTRYKSGILEIKYNGRNIHEVLQLTVREAMDFFHAAPKLVQRLKVLDDVGLGYLR 811 Query: 823 LGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQG 882 LGQSATTLSGGEAQRVKLA LS TL+I DEPTTGLHF DI +LL +L + G Sbjct: 812 LGQSATTLSGGEAQRVKLAAHLSTASNAGTLFICDEPTTGLHFDDIAKLLAAFQRLIENG 871 Query: 883 NTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLKPML 940 ++V+IEHNLDVIK ADW++DLGPEGGS GG+I+ +G PE +A + S+T +L+ +L Sbjct: 872 GSLVIIEHNLDVIKAADWVIDLGPEGGSRGGQIVATGPPEVIAVAKDSYTGHYLREVL 929 Score = 82.0 bits (201), Expect = 1e-13, Method: Composition-based stats. Identities = 39/118 (33%), Positives = 60/118 (50%), Gaps = 6/118 (5%) Query: 609 PEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIA 668 + + + GAR +NLK+++L +P T +TGVSGSGKS+L DT++ QR+ + A Sbjct: 1 MQDYIAIRGARVHNLKNISLCIPHNQLTVVTGVSGSGKSSLAFDTIYAEGQRRYVESLSA 60 Query: 669 EPAPYRDIQGLEHFDKV------IDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPE 720 + + D + + I Q R PRS AT T F +R L+A V + Sbjct: 61 YARQFLERMEKPDVDDIDGIAPAVAIRQKNTTRNPRSTVATSTECFDFLRLLYARVGQ 118 >UniRef50_B3QT58 Excinuclease ABC, A subunit n=23 Tax=Bacteroidetes/Chlorobi group RepID=B3QT58_CHLT3 Length = 980 Score = 996 bits (2575), Expect = 0.0, Method: Composition-based stats. Identities = 441/952 (46%), Positives = 608/952 (63%), Gaps = 39/952 (4%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 63 + ++GARTHNLKNI++ IPR+KL+V++G+SGSGKSSLAFDTLYAEG RRYVES+S+Y RQ Sbjct: 52 VFIKGARTHNLKNIDVAIPRNKLVVISGVSGSGKSSLAFDTLYAEGHRRYVESMSSYIRQ 111 Query: 64 FLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCPDH 123 FL + KPDVD I+G++PAI+IEQK+TS NPRSTVGT+TEI+DYLRLLFAR+G+ D Sbjct: 112 FLERIPKPDVDFIQGIAPAIAIEQKTTSKNPRSTVGTVTEIYDYLRLLFARIGKTYSKDT 171 Query: 124 DVPLAAQTVSQMVDNVLSQPEGKRLMLLAP-----IIKERKGEHTKTLENLASQGYIRAR 178 + + T ++ V E + + P + K+++ + L+NL +G+ R Sbjct: 172 NELVLKHTPEDVLFQVKLFEERTKFYIGFPFPHHKLAKKKERSFSDELQNLKQKGFTRIV 231 Query: 179 IDGEVCDLSDPP------KLELQKKHTIEVVVDRFKVRDDLT--QRLAESFETALELSGG 230 + DLS KL ++ + V+ DR R+D R+ E+ ET SGG Sbjct: 232 KGETIFDLSSEQDENKLTKLNKSEQSELLVLTDRLAYREDEELFHRVTEAVETCFRESGG 291 Query: 231 TAVVADMDDPKAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFD 290 A V + + FS G E P+LF+FN+P GACPTC G G D Sbjct: 292 YATVRVL---GGRDYQFSDKLEL--NGIEYEEPTPQLFAFNSPVGACPTCQGFGRIPGVD 346 Query: 291 PDRVIQNPELSLAGGAIRGWDR-RNFYYFQMLKSLADHYKFDVEAPWGSLSANVHKVVLY 349 D V+ N LS+ GAI W+ ++ + + L +A +K ++ P+GSLS N K++ Sbjct: 347 EDAVVPNKALSIRDGAIACWNSDKHSRHLRDLIRVASEHKIPLDEPYGSLSENAKKIIWQ 406 Query: 350 GSGKENIEFKYMNDRGDTSIRRHPFEGVLHNMERRYKET-ESSAVREELAKFISNRPCAS 408 G+ + F GV + +E R L+++ C Sbjct: 407 GA------------------KNSDFLGVKGFFKEIEREAQYKMHYRVLLSRYRGYTVCPD 448 Query: 409 CEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDRLK 468 C+GTRLR++A V V L I +M+IG A +FF N++++ +A IL+EI RL Sbjct: 449 CQGTRLRKDALQVRVAKMTLADIVEMTIGEAYQFFKNIEISRFDKAVASTILEEILRRLS 508 Query: 469 FLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLL 528 +LV VGL+YLTLSR ++TLSGGE+QRI LA+ +G+ LVG +Y+LDEPSIGLHQRD+ RL+ Sbjct: 509 YLVEVGLDYLTLSRPSQTLSGGESQRINLATSLGSSLVGSLYILDEPSIGLHQRDSARLI 568 Query: 529 GTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLT 588 L LRD+GNTVIVVEHD + I AAD ++D+GP AG HGGE++ G E I+ S+T Sbjct: 569 RILRKLRDIGNTVIVVEHDREIIEAADIILDLGPKAGRHGGELIFHGTYEDILQSASSVT 628 Query: 589 GQYMSGKRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKST 648 G+Y++GK I +P+KR + + +++ GA NNLK++ + P+G+ TC+TGVSGSGKST Sbjct: 629 GKYLTGKNIIPLPEKRREPDFSRAIEVQGAMENNLKNLDVKFPLGVMTCVTGVSGSGKST 688 Query: 649 LINDTLFPIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVF 708 L+ D L+ +Q G T + ++ + G E K+ +DQSPIGRT RSNPATY +F Sbjct: 689 LVTDILYLGLLKQKVG-TAEKVGTHKALLGGEQISKIELVDQSPIGRTSRSNPATYLKIF 747 Query: 709 TPVRELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKG 768 +R +FA ++A+G+ PG FSFN+ GGRCE C G+GVI +EM FL DI C+ C G Sbjct: 748 DEIRSIFAHTTYAKAKGWEPGYFSFNIPGGRCETCAGEGVIHIEMQFLADIETVCEDCHG 807 Query: 769 KRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSAT 828 +RY ETL Y GK+I +VLDMT+ EA EFF AL+RKL L DVGL Y++LGQSA+ Sbjct: 808 RRYKAETLSALYNGKSIADVLDMTVTEAIEFFQDHRALSRKLSILEDVGLGYLQLGQSAS 867 Query: 829 TLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVI 888 TLSGGEAQR+KLA +S + L+I DEPTTGLHF DIQ+L+ ++L QGNT+++I Sbjct: 868 TLSGGEAQRLKLALHISSIESRNALFIFDEPTTGLHFDDIQKLIQCFNQLLAQGNTLIII 927 Query: 889 EHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLKPML 940 EHNLDVIK ADWI+DLGP+ G+ GGEI+ +G PE++A EAS T ++LK L Sbjct: 928 EHNLDVIKQADWIIDLGPDAGNRGGEIVAAGVPESIAAAEASFTGKYLKEYL 979 Score = 56.5 bits (135), Expect = 5e-06, Method: Composition-based stats. Identities = 36/121 (29%), Positives = 57/121 (47%), Gaps = 6/121 (4%) Query: 605 VPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNG 664 + + + GAR +NLK++ + +P I+GVSGSGKS+L DTL+ R+ Sbjct: 44 QFVSRHSGVFIKGARTHNLKNIDVAIPRNKLVVISGVSGSGKSSLAFDTLYAEGHRRYVE 103 Query: 665 ------ATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGV 718 E P D+ ++ I I+Q + PRS T T ++ +R LFA + Sbjct: 104 SMSSYIRQFLERIPKPDVDFIQGIAPAIAIEQKTTSKNPRSTVGTVTEIYDYLRLLFARI 163 Query: 719 P 719 Sbjct: 164 G 164 >UniRef50_Q2S5D7 Excinuclease ABC, A subunit n=3 Tax=Bacteria RepID=Q2S5D7_SALRD Length = 981 Score = 995 bits (2573), Expect = 0.0, Method: Composition-based stats. Identities = 430/975 (44%), Positives = 594/975 (60%), Gaps = 56/975 (5%) Query: 2 DKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYA 61 D I +RGAR HNLK+I+L +PR++LIV TG SGSGKSSL FDT+YAEGQRRYVESLSAYA Sbjct: 27 DHIVIRGARQHNLKDIDLDLPRNELIVFTGPSGSGKSSLCFDTIYAEGQRRYVESLSAYA 86 Query: 62 RQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCP 121 RQFL M+KP+ D I GL+PAI+IEQK++ NPRSTV T TEI+D+LRLLFAR+G P Sbjct: 87 RQFLERMDKPEADLITGLAPAIAIEQKTSGKNPRSTVATQTEIYDHLRLLFARIGTTYSP 146 Query: 122 DHDVPLAAQTVSQMVDNVLSQPE-GKRLMLLAPIIKERKGEHTKTLENLASQGYIRAR-- 178 P++ T + D + + G R L API + L +L +G+ R Sbjct: 147 VSGEPVSRDTPHDVADRLDDALDDGTRFYLCAPIPEHADMALRDQLTSLRERGFYRILRL 206 Query: 179 ---------IDGEVCDLSD--PPKLELQKKHTIEVVVDRFKVRD---DLTQRLAESFETA 224 + E+ DL+ P + + + V++DR KV+ D R+AES E A Sbjct: 207 PTERQAEQGQEPEILDLNQEAPSSVNHYGRARLRVLIDRLKVKTGDADTRSRIAESVEQA 266 Query: 225 LELSGGTAVV-------------ADMDDPKAEELLFSANFACPICGYSMRELEPRLFSFN 271 + G V D + LF + G E P+LFSFN Sbjct: 267 FDEGDGYCTVIPAPRGGYDETAHPDASQHQGPIPLFEFSAHFERDGMRFEEPTPQLFSFN 326 Query: 272 NPAGACPTCDGLGVQQYFDPDRVIQNPELSLAGGAIRGWDRRNF-YYFQMLKSLADHYKF 330 +P GACPTC G G D D ++ N +LS+ GA+ + + +F+ L ++A Sbjct: 327 SPVGACPTCQGFGRVPGLDEDLIVPNKQLSIRDGALAPFRGDKWGKHFKDLIAVAADVGL 386 Query: 331 DVEAPWGSLSANVHKVVLYGSGKENIEFKYMNDRGDTSIRRHPFEGVLHNMERRYKETES 390 D++ P+ L+ ++V G + G+ E + + Sbjct: 387 DIDCPYHELADWEEEIVWEGKDD--------------------YIGLHGFFEFLEENSYK 426 Query: 391 SAVREELAKFISNRPCASCEGTRLRREARHVYVEN-----TPLPAISDMSIGHAMEFFNN 445 R A+F C C G RL +A +V V + I M+ A ++F Sbjct: 427 RHYRIFRARFRGYSECPDCSGHRLCDDALYVKVGGDAVEQKHIGEICAMTTRAARDYFEA 486 Query: 446 LKLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGL 505 L L ++A ++++E+ +R ++LV+VGL+YLTL R A+TLSGGE QRI L++ +G+ L Sbjct: 487 LALTDYEQEVAGRVMEELRERSRYLVDVGLDYLTLDRLAQTLSGGETQRINLSTSLGSSL 546 Query: 506 VGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAG 565 VG +YVLDEP++GLH RDNERL+ L LRDLGNTV+VVEHD + AAD ++D+GP +G Sbjct: 547 VGSLYVLDEPTVGLHPRDNERLIDILQRLRDLGNTVLVVEHDPVTMEAADQLVDLGPASG 606 Query: 566 VHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEVPKKRVPANPEKVLKLTGARGNNLKD 625 GGEVV +GP + I+ +SLTGQY+SG++++ VP +R PA+P+ L + AR +NLK Sbjct: 607 AFGGEVVFQGPYDEILEAEDSLTGQYLSGRKEVPVPDERRPADPDDTLVIENARQHNLKH 666 Query: 626 VTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAEPAPYRDIQGLEHFDKV 685 V + +P+G C+TGVSGSGKSTL N TLF R G+ + + I+G E+ D V Sbjct: 667 VDVEIPLGQIVCVTGVSGSGKSTLTNQTLFEGLHRLKGGSGDGKVGAHDTIRGHENVDAV 726 Query: 686 IDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESRARGYTPGRFSFNVRGGRCEACQG 745 +DQS IGR+PRSNPATYT F +R+LFA +S+ GY G FSFN +GGRCE C+G Sbjct: 727 EMVDQSSIGRSPRSNPATYTNAFDGIRKLFAQARQSQVHGYDRGTFSFNTKGGRCEECEG 786 Query: 746 DGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAVPA 805 GV+KVEM FL D+Y+ C+ C G+RY +E L + Y GK I +VLDMT++EA +FF+ A Sbjct: 787 QGVVKVEMQFLADLYLECEACNGQRYKKEVLNVTYNGKNIADVLDMTVDEAADFFEGERA 846 Query: 806 LARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHF 865 + KL+ L D+GL Y+ LGQ +TTLSGGEAQR+KLA LS R + +TLYI DEPTTGLHF Sbjct: 847 IINKLEVLQDIGLGYLTLGQPSTTLSGGEAQRIKLASHLSGRASDRTLYIFDEPTTGLHF 906 Query: 866 ADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVA 925 DI++LL +L + +++++IEHNLDV+K AD ++DLGPEGG GG ++ +GTPE VA Sbjct: 907 DDIRKLLGAFEQLVENSHSVLIIEHNLDVVKYADHVIDLGPEGGDAGGNVVATGTPEEVA 966 Query: 926 ECEASHTARFLKPML 940 C+ SHT RFL+ +L Sbjct: 967 ACDESHTGRFLRDVL 981 Score = 86.2 bits (212), Expect = 6e-15, Method: Composition-based stats. Identities = 41/138 (29%), Positives = 63/138 (45%), Gaps = 6/138 (4%) Query: 588 TGQYMSGKRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKS 647 T + + I + + + + GAR +NLKD+ L LP TG SGSGKS Sbjct: 4 TERLPTQDPVIANASVTARESAQDHIVIRGARQHNLKDIDLDLPRNELIVFTGPSGSGKS 63 Query: 648 TLINDTLFPIAQRQLNGATIAEPAPYRDIQGLEHFDKV------IDIDQSPIGRTPRSNP 701 +L DT++ QR+ + A + + D + I I+Q G+ PRS Sbjct: 64 SLCFDTIYAEGQRRYVESLSAYARQFLERMDKPEADLITGLAPAIAIEQKTSGKNPRSTV 123 Query: 702 ATYTGVFTPVRELFAGVP 719 AT T ++ +R LFA + Sbjct: 124 ATQTEIYDHLRLLFARIG 141 >UniRef50_C9PZ01 Excision endonuclease subunit UvrA n=8 Tax=Bacteroidetes RepID=C9PZ01_9BACT Length = 983 Score = 992 bits (2566), Expect = 0.0, Method: Composition-based stats. Identities = 405/953 (42%), Positives = 569/953 (59%), Gaps = 32/953 (3%) Query: 2 DKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYA 61 IE++G R +NLKNI+L IPR+K I + G+SGSGKSSLAFDTLYAEGQRRYVESLS+YA Sbjct: 47 KHIELKGVRVNNLKNISLNIPRNKFIAIAGVSGSGKSSLAFDTLYAEGQRRYVESLSSYA 106 Query: 62 RQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCP 121 RQFL M KP+ D I+GL PAI+IEQK + NPRSTVGT TEI++Y+RLLFAR+G+ P Sbjct: 107 RQFLGNMSKPECDFIKGLPPAIAIEQKVNTRNPRSTVGTSTEIYEYMRLLFARIGKTFSP 166 Query: 122 DHDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARIDG 181 + +V ++ G + ++LAPI K L +GY R G Sbjct: 167 ISGQEVKKHSVEDVIQCTKQYSNGTKFVVLAPIHVPEGRTFEKQLNMFVQEGYARLWHKG 226 Query: 182 EVCDLSD----PPKLELQKKHTIEVVVDRFKVRD--DLTQRLAESFETALELSGGTAVVA 235 + + D +L+ K +++DR V D + RL +S ETA+ G + Sbjct: 227 DFVRIDDLTENAERLKDSKPDEYLLLIDRLAVDDTKEHISRLTDSVETAMYEGHGECRLV 286 Query: 236 DMDDPKAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVI 295 + P FS+ F G + E +F+FN+P GACP+C+G G + VI Sbjct: 287 FL--PSNITYEFSSRFE--TDGMTFDEPSDNMFAFNSPLGACPSCEGFGKVIGIEESLVI 342 Query: 296 QNPELSLAGGAIRGWDRRNFYYFQ-MLKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKE 354 N LS+ G ++ W ++ A F + P+ LS ++ +G E Sbjct: 343 PNSTLSVYDGCVQCWHGDKMGIWKEEFCRRAAKDDFPIFKPYFELSRKEKDMLWHGLPSE 402 Query: 355 NIEFKYMNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGTRL 414 D + F+ V N R L ++ C C GTRL Sbjct: 403 K-----GRDISEQVSIDAFFQMVREN-------QYKIQYRVMLNRYRGKTTCPECHGTRL 450 Query: 415 RREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNVG 474 ++EA V ++ + + +M IG +F+NL+L AKIA ++L EI +RL+FL++VG Sbjct: 451 KKEATWVKIDGMSIADLVEMPIGKLKTWFDNLQLNDYDAKIAARLLTEINNRLQFLLDVG 510 Query: 475 LNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHL 534 L+YLTL+R + TLSGGE+QRI+L + +G+ LVG +Y+LDEPSIGLH RD +RL+ L L Sbjct: 511 LHYLTLNRQSNTLSGGESQRIQLTTSLGSSLVGSLYILDEPSIGLHSRDTDRLIKVLNDL 570 Query: 535 RDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAV-----PESLTG 589 +GNTVIVVEHDED +R ADH+ID+GP AG GGE+V GP I P S T Sbjct: 571 VQIGNTVIVVEHDEDILRKADHLIDVGPDAGRLGGEIVFNGPASDIKKAALDRYPSSHTV 630 Query: 590 QYMSGKRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTL 649 Y++G KI+ P R + ++L GAR NNLK + +T P+ + T ITGVSGSGKS+L Sbjct: 631 AYLTGADKIDTPISR--RKWNQSIQLKGARMNNLKGIDVTFPLNVLTVITGVSGSGKSSL 688 Query: 650 INDTLFPIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFT 709 I L P +R + A L+ + +DQ+PIGR+ RSNPATY + Sbjct: 689 IKGILHPALKRSMGDVADAPGEFIALEGDLKQVKHIEFVDQNPIGRSTRSNPATYVKAYE 748 Query: 710 PVRELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGK 769 P+R+LFA P ++ G++ FSFN GGRCE C G GVI VEM F+ D+ + C+ C G+ Sbjct: 749 PIRQLFANQPLAKQLGFSAQYFSFNAEGGRCEECNGAGVITVEMQFMADLVLECETCHGQ 808 Query: 770 RYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAVPA--LARKLQTLMDVGLTYIRLGQSA 827 R+ ++ L+++Y+GK I+++LDMT+ EA EFF + + +LQ L DVGL YI+LGQ++ Sbjct: 809 RFKQDVLDVRYEGKNINDILDMTVSEAIEFFTSHKQTSVVNRLQPLEDVGLGYIKLGQNS 868 Query: 828 TTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVV 887 +TLSGGE QRVKLA + + TL+I DEPTTGLHF DI++LL + L ++G++++V Sbjct: 869 STLSGGENQRVKLAYFIGQEKAEPTLFIFDEPTTGLHFHDIKRLLRAMGALIERGHSVIV 928 Query: 888 IEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLKPML 940 IEHN+DVIK AD ++DLGP+GG GG+++ +GTPE +A C+ S T ++LK L Sbjct: 929 IEHNMDVIKCADHVIDLGPDGGDRGGKLVFAGTPEELANCKESITGKYLKAQL 981 Score = 77.0 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 41/119 (34%), Positives = 60/119 (50%), Gaps = 6/119 (5%) Query: 607 ANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGAT 666 A +K ++L G R NNLK+++L +P F I GVSGSGKS+L DTL+ QR+ + Sbjct: 43 AFMDKHIELKGVRVNNLKNISLNIPRNKFIAIAGVSGSGKSSLAFDTLYAEGQRRYVESL 102 Query: 667 IAEPAPYRDIQGLEHFDKV------IDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVP 719 + + D + I I+Q R PRS T T ++ +R LFA + Sbjct: 103 SSYARQFLGNMSKPECDFIKGLPPAIAIEQKVNTRNPRSTVGTSTEIYEYMRLLFARIG 161 >UniRef50_B8I0Z8 Excinuclease ABC, A subunit n=1 Tax=Clostridium cellulolyticum H10 RepID=B8I0Z8_CLOCE Length = 993 Score = 991 bits (2561), Expect = 0.0, Method: Composition-based stats. Identities = 412/956 (43%), Positives = 610/956 (63%), Gaps = 24/956 (2%) Query: 2 DKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYA 61 +I V GA HNLKNIN+ +P++KLIV TG+SGSGKS+L FDT+YAE QRR+V+ LS+ + Sbjct: 31 KEIVVEGACHHNLKNINITLPKNKLIVFTGVSGSGKSTLVFDTIYAEAQRRFVDGLSSTS 90 Query: 62 RQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCP 121 ++ + KP VD I GLSPAI+I+QKS +NPRSTVGT+TEI DYLR+L+ ++G P C Sbjct: 91 KRHFEKVGKPSVDKIYGLSPAIAIQQKSLGNNPRSTVGTLTEISDYLRILYEKIGIPYCL 150 Query: 122 DHDVPLAAQTVSQMVDNVLS-QPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARID 180 + P+ QT ++ +++ G+ ++ AP++ ++ + ++ L G+ + R+D Sbjct: 151 NCGTPIYKQTPREIAESICKKFSAGESFIIYAPLLTQKTNDINSSIRELFQGGFRKLRLD 210 Query: 181 GEVCDLSDPPKLELQKKHTIEVVVDRFKVRD--------DLTQRLAESFETALELSGGTA 232 + D+++ ++ +I+V+ F + + + R+ L + GT Sbjct: 211 SNIIDITEETRISQTGNLSIDVISKEFFLPNVLGKENNTEFIDRVTAEIRNLLLYTKGTL 270 Query: 233 VVADMDDPKAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPD 292 + + L +SA C C E+ + FS+N P G CP C GLGV+Q P Sbjct: 271 EIV---SNSGKILYYSAEQICARCHTVFPEITIQHFSYNTPIGMCPDCRGLGVEQEISPL 327 Query: 293 RVIQNPELSLAGGAIRGWD-----RRNFYYFQMLKSLADHYKFDVEAPWGSLSANVHKVV 347 +I + +S+ GA++ + +++ + L L +HY D+E PW L ++ Sbjct: 328 LLIDDENVSILDGALKWFGNLRDGKKSTWPTGPLDILFEHYNLDIETPWSKLPEWFRNII 387 Query: 348 LYGSGKENIEFKYMNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCA 407 LYGSG+E ++++ D +G++ + R Y +T+S R++ ++ ++PC Sbjct: 388 LYGSGEEKLKYRSAQGMKD---NYKAVKGLVPELTRLYYDTDSEHTRKKYGDYMVSKPCK 444 Query: 408 SCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNL--KLAGQRAKIAEKILKEIGD 465 +C+GTRL EAR + V N + ++ +SI AM++ + L + ++++++L EI + Sbjct: 445 ACKGTRLCPEARSIKVGNLTISEVNALSIDDAMKWILEIYNSLDNKTWELSKELLMEIYN 504 Query: 466 RLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNE 525 RL LV+VGLNYL+L+R+A TLSGGE QR+RLA Q+ +G+V V+YVLDEPS GLH +D + Sbjct: 505 RLSLLVDVGLNYLSLNRTAPTLSGGEGQRVRLACQLNSGIVDVLYVLDEPSTGLHPKDTK 564 Query: 526 RLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPE 585 +L+ T+ LRDLGNTV+VVEH++D ++ AD ++DIGP AG GG V+AEG + ++A Sbjct: 565 KLIQTMQRLRDLGNTVLVVEHEQDIMKNADWLVDIGPKAGNGGGYVMAEGTPDVVLADNN 624 Query: 586 SLTGQYMSGKRKIEVPK-KRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGS 644 SLT QY+ GK K+ + + + N K L L G + NNLK+VT +P+G TCITGVSGS Sbjct: 625 SLTAQYLCGKLKVGLKRVPKDVRNQGKWLILKGVKYNNLKNVTARIPIGSLTCITGVSGS 684 Query: 645 GKSTLINDTLFPIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATY 704 GKS+LI L P+ R++NG Y + G E+ DK++++ QSPIGR P SNPATY Sbjct: 685 GKSSLIGGVLEPLLNRRINGGLDP-VGKYESLTGDEYLDKLVNVSQSPIGRRPTSNPATY 743 Query: 705 TGVFTPVRELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCD 764 TG+F +R++FA ++ +G+ FSFN GRCE C+G G IK+EMHFLPD+++PC Sbjct: 744 TGLFDKIRKVFANTEYAKEKGFNSEYFSFNSNKGRCEICEGQGQIKIEMHFLPDVWIPCT 803 Query: 765 QCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLG 824 +C GKR+ + L+ K+K K I EVL+M +E+A FF + LQTL DVGL YI+LG Sbjct: 804 ECGGKRFKADILKAKFKDKDISEVLEMDVEKALSFFIGYKDIVGILQTLKDVGLDYIKLG 863 Query: 825 QSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNT 884 QSATTLSGGEAQRVKLA+ELS + G +YILDEPTTGLHF DIQ LL V +L D G+T Sbjct: 864 QSATTLSGGEAQRVKLAKELSTKVKGSMIYILDEPTTGLHFNDIQHLLKVFQRLVDIGHT 923 Query: 885 IVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLKPML 940 +VVIEH+L++IK ADW++DLGPEGG+ GGEI+ GT E + S+T + LK + Sbjct: 924 LVVIEHDLNIIKMADWVIDLGPEGGADGGEIIAQGTVEDILNNPNSYTGQALKSSI 979 Score = 82.7 bits (203), Expect = 6e-14, Method: Composition-based stats. Identities = 41/145 (28%), Positives = 64/145 (44%), Gaps = 6/145 (4%) Query: 581 MAVPESLTGQYMSGKRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITG 640 M + + + +R K + + GA +NLK++ +TLP TG Sbjct: 1 MNEDIEIVKREFTSRRSFPRKIISDERCSSKEIVVEGACHHNLKNINITLPKNKLIVFTG 60 Query: 641 VSGSGKSTLINDTLFPIAQRQLNGATIAEPAPYRDIQGLEHFDKV------IDIDQSPIG 694 VSGSGKSTL+ DT++ AQR+ + + + G DK+ I I Q +G Sbjct: 61 VSGSGKSTLVFDTIYAEAQRRFVDGLSSTSKRHFEKVGKPSVDKIYGLSPAIAIQQKSLG 120 Query: 695 RTPRSNPATYTGVFTPVRELFAGVP 719 PRS T T + +R L+ + Sbjct: 121 NNPRSTVGTLTEISDYLRILYEKIG 145 >UniRef50_B3DYB1 Excinuclease ABC subunit A, ATPase n=4 Tax=Bacteria RepID=B3DYB1_METI4 Length = 947 Score = 991 bits (2561), Expect = 0.0, Method: Composition-based stats. Identities = 443/948 (46%), Positives = 626/948 (66%), Gaps = 20/948 (2%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 63 I ++GA+ HNLKNI+L IP++ V+TG+SGSGKSSLAFDTL+AE QRRY+ESLS Y+RQ Sbjct: 6 ISIKGAKEHNLKNISLRIPKNSFTVITGVSGSGKSSLAFDTLHAEAQRRYMESLSVYSRQ 65 Query: 64 FLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCPDH 123 FL EKP +D +EG+ P+I+IEQK++ +PRSTV T+T I++YL+LLFA +GEP P Sbjct: 66 FLEQFEKPQLDALEGIIPSIAIEQKTSKGSPRSTVATLTNIYEYLKLLFAHLGEPHHPIT 125 Query: 124 DVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARIDGEV 183 L T+ +M +LS +MLLA ++K K + LE + +G++R RI G+V Sbjct: 126 GKKLKRYTIEEMATELLSLAPQSSVMLLASLVKNEKQKLNHLLEQVQKEGFLRVRIAGKV 185 Query: 184 CDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGG--TAVVADMDDPK 241 ++ +L ++ ++E+V+DR ++ D+ RL +S E AL + G AVV + D K Sbjct: 186 MEIEQALELPSEEPPSVEIVIDRIRIEPDIKSRLYDSLELALRVGKGVVRAVVQEKDSGK 245 Query: 242 AEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPELS 301 EL+ S P GY +L P+ FS+N+P GACP C GLG + FDP ++ +P + Sbjct: 246 EVELVMSNLHYDPETGYLFEDLSPKHFSYNSPWGACPHCHGLGTELDFDPALIVPDPSVP 305 Query: 302 LAGGAIRGWDRRN----FYYFQMLKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKENIE 357 L W++ + L A Y + W S KV+LYGS NI+ Sbjct: 306 LGENPFAPWEKMGRGLKELLVEELLEQASFYGESFDKSWEDCSEEFKKVILYGSSASNIK 365 Query: 358 FKYMNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGTRLRRE 417 K P+EGV+ ++ R +KE+ S+ +R L +F+ PC C+G RL + Sbjct: 366 KK-------KGSLPKPYEGVIPSLRRMFKESSSALIRSRLKEFLFAVPCEVCQGQRLNPD 418 Query: 418 ARHVYVE-----NTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDRLKFLVN 472 A V +E + ++++ A+ + +L + K A +IL + RL+ LV Sbjct: 419 ALAVTIEIEGWPPMNIAQTMNLTVTEALGWTLSLLSRHKENKGATEILSGLVSRLENLVE 478 Query: 473 VGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLI 532 +GL YL L+R A TLSGGE+QR+RLASQ+ L G++YVLDEPSIGLH RD +L+ + Sbjct: 479 LGLGYLELNRQASTLSGGESQRVRLASQLSGELTGLLYVLDEPSIGLHPRDTAKLVKLIK 538 Query: 533 HLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYM 592 L+ LGNTVIVVEHDE IR AD ++++GPGAG GG VVA G +E ++ ESLTG Y+ Sbjct: 539 KLKQLGNTVIVVEHDEYTIREADTIVELGPGAGPKGGNVVAWGSIEEVLKTKESLTGAYL 598 Query: 593 SGKRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLIND 652 G+R I VP +R +K ++L G R +NLK++ + PVGL +C+TGVSGSGKSTL+ND Sbjct: 599 RGERSIPVPSRRRKPG-KKFIRLYGVREHNLKNIDVAFPVGLLSCVTGVSGSGKSTLVND 657 Query: 653 TLFPIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVR 712 L I +L + EP + I+GL +V+ +DQSPIGR+ RSNPA++ G +R Sbjct: 658 VLAKIFLNRLQDPRV-EPGAFDKIEGLSWIKRVVIVDQSPIGRSMRSNPASFIGALAHIR 716 Query: 713 ELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYN 772 ELFA +P+S+ G++ RFSFN+ GGRCE C+G+GVI++EM FLP +Y C+ C+GKR+N Sbjct: 717 ELFAKLPKSKVLGFSASRFSFNIPGGRCERCKGEGVIELEMAFLPPVYETCEACQGKRFN 776 Query: 773 RETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSG 832 RETLE+ Y+GK I ++L+MTIEE FF +P L KLQ + +VGL Y++LGQ A+TLSG Sbjct: 777 RETLEVTYRGKNIADILEMTIEEGSVFFKNIPPLFEKLQIMEEVGLGYLKLGQPASTLSG 836 Query: 833 GEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNL 892 GEAQR+KLA EL K G TLYILDEPTTGLHFADI+ LL++LH+L D+GNT++VIEHNL Sbjct: 837 GEAQRIKLATELLKGSEGNTLYILDEPTTGLHFADIELLLNLLHRLVDKGNTVIVIEHNL 896 Query: 893 DVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLKPML 940 +V+K+AD+++DLGPEGG+GGG+I+ +GTPE VA+ +AS T ++L+ +L Sbjct: 897 EVVKSADYVIDLGPEGGTGGGKIIAAGTPEEVAKTKASWTGQYLRSLL 944 Score = 100 bits (248), Expect = 4e-19, Method: Composition-based stats. Identities = 62/271 (22%), Positives = 96/271 (35%), Gaps = 58/271 (21%) Query: 2 DKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYA 61 I + G R HNLKNI++ P L VTG+SGSGKS+L D L A Sbjct: 616 KFIRLYGVREHNLKNIDVAFPVGLLSCVTGVSGSGKSTLVNDVL---------------A 660 Query: 62 RQFLSLMEKPDV-----DHIEGLS---PAISIEQKSTSHNPRSTVGTITEIHDYLRLLFA 113 + FL+ ++ P V D IEGLS + ++Q + RS + ++R LFA Sbjct: 661 KIFLNRLQDPRVEPGAFDKIEGLSWIKRVVIVDQSPIGRSMRSNPASFIGALAHIRELFA 720 Query: 114 RVGEP-----------------RCPDHDVPLAAQTVSQM---VDNVLSQPEGKRLMLLAP 153 ++ + RC + V +GKR Sbjct: 721 KLPKSKVLGFSASRFSFNIPGGRCERCKGEGVIELEMAFLPPVYETCEACQGKRFNRETL 780 Query: 154 IIKERKGEHTKTLENLASQG----------YIRARIDGEV----CDLSDPPK-LELQKKH 198 + R LE +G + + +I EV L P L + Sbjct: 781 EVTYRGKNIADILEMTIEEGSVFFKNIPPLFEKLQIMEEVGLGYLKLGQPASTLSGGEAQ 840 Query: 199 TIEVVVDRFKVRDDLTQRLAESFETALELSG 229 I++ + K + T + + T L + Sbjct: 841 RIKLATELLKGSEGNTLYILDEPTTGLHFAD 871 Score = 76.6 bits (187), Expect = 4e-12, Method: Composition-based stats. Identities = 40/117 (34%), Positives = 61/117 (52%), Gaps = 6/117 (5%) Query: 610 EKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAE 669 + + GA+ +NLK+++L +P FT ITGVSGSGKS+L DTL AQR+ + Sbjct: 3 NGFISIKGAKEHNLKNISLRIPKNSFTVITGVSGSGKSSLAFDTLHAEAQRRYMESLSVY 62 Query: 670 PAPYRDIQGLEHFDKV------IDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPE 720 + + D + I I+Q +PRS AT T ++ ++ LFA + E Sbjct: 63 SRQFLEQFEKPQLDALEGIIPSIAIEQKTSKGSPRSTVATLTNIYEYLKLLFAHLGE 119 >UniRef50_Q027K1 Excinuclease ABC subunit A n=2 Tax=Bacteria RepID=Q027K1_SOLUE Length = 960 Score = 984 bits (2543), Expect = 0.0, Method: Composition-based stats. Identities = 442/951 (46%), Positives = 605/951 (63%), Gaps = 15/951 (1%) Query: 3 KIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYAR 62 I V+GAR HNLKN++L +PRD+LIVVTGLSGSGKSSLAFDT+YAEGQRRY+ESLS YA+ Sbjct: 11 TIAVQGARVHNLKNVSLTLPRDRLIVVTGLSGSGKSSLAFDTIYAEGQRRYMESLSTYAK 70 Query: 63 QFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCPD 122 +F++ + KPDVD + GLSP ISIEQK+ NPRSTVGT+T+I YL LLFA + EP CP Sbjct: 71 RFVAQVAKPDVDFVFGLSPVISIEQKTIGSNPRSTVGTMTDIASYLNLLFATIAEPHCPR 130 Query: 123 HDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARIDGE 182 +A +T +Q+++ +L+ PEG + L AP+ E + +G + IDG Sbjct: 131 TGERVANRTANQILEAILALPEGTEIELRAPVFPVYGEELEFVFTEVRKKGCRQLVIDGR 190 Query: 183 VCDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVADMDDP-K 241 DL++ L+ + ++ VVDRF V + + L + G V + K Sbjct: 191 RVDLANELDLDETQVRDMDAVVDRFIVSAKHEKAIKAGIAATLLVGDGLMQVQILKGANK 250 Query: 242 AEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPELS 301 AE F ++ +EP F FNNP AC TC GLG+ + P+ ++ +P+ S Sbjct: 251 AEADRFYKGLCSATHHFTYGGIEPEFFMFNNPESACRTCGGLGIYKITHPELLVPDPKRS 310 Query: 302 LAGGAI---RGWDRRNFYYFQMLKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKENIEF 358 + GG + + +++ SL+ F ++ PW L A+ +L G ++ Sbjct: 311 VIGGCFVREAFKYNPDTWDGRVMYSLSKALPFALDTPWEKLPASARHAILNGIDRKIPVV 370 Query: 359 KYMND---RGDTSIRRHPFEGVLHNMERRYKETE-----SSAVREELAKFISNRPCASCE 410 + R D + F G+ +ER Y+ SS + + L K + R C C+ Sbjct: 371 MPPDGKVKREDWQGKEVGFGGIARRIERHYRRYRQRGEASSGMEQWLDKVMVERTCPDCK 430 Query: 411 GTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDRLKFL 470 G RLR V + + ++ F LK AG+ ++ +EI R++ L Sbjct: 431 GARLRATRLLFTVAGKSIHEVGGLNFDELHGFLGELKPAGRGGDAGRQVAREIRGRVELL 490 Query: 471 VNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGT 530 + +GL+YL L+R + TLSGGEAQRIRL++QIG+GL+G++YVLDEPSIGLH +DN +++ T Sbjct: 491 LGIGLDYLNLNRRSGTLSGGEAQRIRLSTQIGSGLMGMLYVLDEPSIGLHPKDNVKMIAT 550 Query: 531 LIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQ 590 L LRD+GNTVIVVEHDED IRAADH++++GPG GVHGG VV EG L +MA S TGQ Sbjct: 551 LESLRDIGNTVIVVEHDEDTIRAADHIVEMGPGPGVHGGRVVVEGTLSEVMACKGSPTGQ 610 Query: 591 YMSGKRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLI 650 ++SGKR+I P R A K L + GAR NNLK V +T P+G ITG SGSGKSTLI Sbjct: 611 FLSGKRRIATPSARR-AGNGKTLIVRGARENNLKSVDVTFPLGTLVAITGASGSGKSTLI 669 Query: 651 NDTLFPIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTP 710 N+ L+ ++L P + I+G EH KV++IDQSPIGR RSNPATY G + Sbjct: 670 NEILYKALWKRLVDTRTL-PGDHDGIEGGEHVHKVVNIDQSPIGRNSRSNPATYIGFYDT 728 Query: 711 VRELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKR 770 +R+LF P + RGY GRFSFNV+GGRCE CQG+GVI +++F+PD+ V C CKG R Sbjct: 729 IRDLFTRTPVAMERGYKAGRFSFNVKGGRCEECQGEGVITTQLYFMPDVEVTCAVCKGAR 788 Query: 771 YNRETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTL 830 + ETLE +GKTI +VL+M +EE EFF PA+++K++ L D+GL Y+ LGQSATTL Sbjct: 789 FGAETLEATLRGKTITDVLNMPVEEGVEFFANEPAVSKKIEVLNDLGLGYLTLGQSATTL 848 Query: 831 SGGEAQRVKLARELSK-RGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIE 889 SGGEAQR+K+A ELSK + + T+YILDEPTTGLH AD+++LL+ L++L D G+T++ IE Sbjct: 849 SGGEAQRIKIATELSKLQRSKHTVYILDEPTTGLHLADVEKLLECLNRLVDAGHTVLAIE 908 Query: 890 HNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLKPML 940 H+LDVIKTAD ++DLGPEGG GGE++ +GTPE +A C+ S+T RFLK L Sbjct: 909 HHLDVIKTADHVIDLGPEGGHAGGEVVATGTPEKIAACKTSYTGRFLKAHL 959 Score = 174 bits (440), Expect = 2e-41, Method: Composition-based stats. Identities = 76/197 (38%), Positives = 107/197 (54%), Gaps = 16/197 (8%) Query: 403 NRPCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKE 462 CA C+G R E + + + +M + +EFF N Sbjct: 778 EVTCAVCKGARFGAETLEATLRGKTITDVLNMPVEEGVEFFAN--------------EPA 823 Query: 463 IGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGV--MYVLDEPSIGLH 520 + +++ L ++GL YLTL +SA TLSGGEAQRI++A+++ +Y+LDEP+ GLH Sbjct: 824 VSKKIEVLNDLGLGYLTLGQSATTLSGGEAQRIKIATELSKLQRSKHTVYILDEPTTGLH 883 Query: 521 QRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAI 580 D E+LL L L D G+TV+ +EH D I+ ADHVID+GP G GGEVVA G E I Sbjct: 884 LADVEKLLECLNRLVDAGHTVLAIEHHLDVIKTADHVIDLGPEGGHAGGEVVATGTPEKI 943 Query: 581 MAVPESLTGQYMSGKRK 597 A S TG+++ K Sbjct: 944 AACKTSYTGRFLKAHLK 960 Score = 101 bits (253), Expect = 1e-19, Method: Composition-based stats. Identities = 58/268 (21%), Positives = 92/268 (34%), Gaps = 36/268 (13%) Query: 2 DKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYA 61 + VRGAR +NLK++++ P L+ +TG SGSGKS+L + LY +R V++ + Sbjct: 630 KTLIVRGARENNLKSVDVTFPLGTLVAITGASGSGKSTLINEILYKALWKRLVDTRTLPG 689 Query: 62 RQFLSLMEKPDVDHIEG---LSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEP 118 D IEG + ++I+Q N RS T +D +R LF R Sbjct: 690 DH----------DGIEGGEHVHKVVNIDQSPIGRNSRSNPATYIGFYDTIRDLFTRTPVA 739 Query: 119 -----------------RCPDHDVPLAAQTVSQM---VDNVLSQPEGKRLMLLAPIIKER 158 RC + T V+ + +G R R Sbjct: 740 MERGYKAGRFSFNVKGGRCEECQGEGVITTQLYFMPDVEVTCAVCKGARFGAETLEATLR 799 Query: 159 KGEHTKTLENLASQGYIRARIDGEVCDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLA 218 T L +G E L + + + QR+ Sbjct: 800 GKTITDVLNMPVEEGVE--FFANEPAVSKKIEVLNDLGLGYLTLGQSATTLSGGEAQRIK 857 Query: 219 ESFETALELSGGTAVVADMDDPKAEELL 246 + E + +L V +D+P L Sbjct: 858 IATELS-KLQRSKHTVYILDEPTTGLHL 884 >UniRef50_Q3B5F8 Excinuclease ABC subunit A n=11 Tax=Chlorobiaceae RepID=Q3B5F8_PELLD Length = 956 Score = 982 bits (2539), Expect = 0.0, Method: Composition-based stats. Identities = 414/955 (43%), Positives = 577/955 (60%), Gaps = 39/955 (4%) Query: 1 MDKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAY 60 + I ++G THNL+NI++ IPR++ +V+TG+SGSGKSSLAFDTLYAEG RRYVESLSAY Sbjct: 16 LPDIVLKGITTHNLQNISVRIPRNRFVVLTGVSGSGKSSLAFDTLYAEGHRRYVESLSAY 75 Query: 61 ARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRC 120 RQFL M +P+++ +EG++PAI+IEQ+S NPRSTVGT++EI+DYLRLL+AR+G+ Sbjct: 76 VRQFLERMPRPEIEVVEGIAPAIAIEQRSIPRNPRSTVGTVSEIYDYLRLLYARIGKIYS 135 Query: 121 PDHDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEH-----TKTLENLASQGYI 175 D + + T +V EG + G H + + NL +G+ Sbjct: 136 RDTNELVLKHTPDDVVMQAGFFLEGTKFYAGFLFPSHEDGSHHLCTVDEEISNLLKKGFF 195 Query: 176 RARIDGEVCDLSDPPK------LELQKKHTIEVVVDRFKVRDDLT--QRLAESFETALEL 227 R V DL+ P + + + V+VDRF R D R+AE+ E+ Sbjct: 196 RVVSGDTVLDLNSPDDCRKVAMMSEAARRALLVLVDRFVTRHDKKFQSRVAEAAESCFSE 255 Query: 228 SGGTAVVADMDDPKAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQ 287 SGG AV+ + + FS G +E P+LF+FN+P GAC TC G G Sbjct: 256 SGGHAVLQVV---GGKTYRFSDRLEL--NGIEYQEPSPQLFAFNSPIGACTTCQGFGRIA 310 Query: 288 YFDPDRVIQNPELSLAGGAIRGWDRRNF-YYFQMLKSLADHYKFDVEAPWGSLSANVHKV 346 D V+ + L+LA GAI W+ + + + L A V+ P+ LS + Sbjct: 311 GIDEHAVVPDRSLTLAEGAIVCWNSEKYRWNLEELLLAAPKAGIPVDVPYEKLSHAEKER 370 Query: 347 VLYGSGKENIEFKYMNDRGDTSIRRHPFEGVLHNMERRYKET-ESSAVREELAKFISNRP 405 + G + G+ K+ R L+++ Sbjct: 371 IWKGVPG------------------TGYRGIWPFFAEIEKDAGYKMHFRVFLSRYRGYAI 412 Query: 406 CASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGD 465 C CEG+RL +AR V V + ++ M+I A FF NL+++ K+AE +++EI Sbjct: 413 CPDCEGSRLNPDARLVRVSGRNITDVARMNIADAHAFFKNLEISPFDRKVAESVIEEIEK 472 Query: 466 RLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNE 525 RL +L++VGL+YLTL R TLSGGE QRI L++ +G+ LVG +Y+LDEPSIGLHQ D+ Sbjct: 473 RLGYLLDVGLDYLTLDRLTHTLSGGEFQRINLSTSLGSPLVGAIYILDEPSIGLHQSDSA 532 Query: 526 RLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPE 585 RL+ L LRDLGNTV+VVEHD + I AAD VID+GP AG GGEVV G +E + Sbjct: 533 RLITLLQKLRDLGNTVVVVEHDREIIEAADEVIDLGPQAGRLGGEVVFHGSVEEMKRSGT 592 Query: 586 SLTGQYMSGKRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSG 645 S+T +Y+ +R I +P+ R + +++ GA NNLK++ + P+G+ TC+TGVSGSG Sbjct: 593 SMTAEYLQDRRSIPLPEVRRTPDFTACIEINGAMQNNLKNIDVRFPLGVMTCVTGVSGSG 652 Query: 646 KSTLINDTLFPIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYT 705 KSTL+ND L R+ G E +R I G D+V +DQSPIG++ RSNP TY Sbjct: 653 KSTLVNDILNRGLMREKEGVKD-EVGTHRAITGGWQIDRVEHVDQSPIGKSSRSNPVTYL 711 Query: 706 GVFTPVRELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQ 765 +F +R +FA P++RARG+ G FSFN+ GGRCEAC G+G +K+EM FL DI C++ Sbjct: 712 KIFDDIRSVFAQTPDARARGWKAGYFSFNIPGGRCEACSGEGSVKIEMQFLADIEAVCEE 771 Query: 766 CKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQ 825 C G RY +TLE+KY+G++I EVLDMT+EEA FF +++RKL L +VGL YIRLGQ Sbjct: 772 CGGLRYKADTLEVKYRGRSIAEVLDMTVEEALVFFAREKSISRKLGVLDEVGLGYIRLGQ 831 Query: 826 SATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTI 885 S++TLSGGEAQR+KLA +++ TL++ DEPTTGLHF DI++LL KL +Q NT+ Sbjct: 832 SSSTLSGGEAQRLKLASFIARADVEHTLFLFDEPTTGLHFEDIRKLLGCFSKLLEQHNTL 891 Query: 886 VVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLKPML 940 +VIEHN D+I ADW++DLGP G GG+++ GTPE +A E S T R L+P+ Sbjct: 892 IVIEHNPDIISQADWVIDLGPGAGDRGGQVIGEGTPEDLAGMEQSLTGRHLQPLF 946 >UniRef50_B2RMJ8 Excinuclease ABC A subunit n=30 Tax=Bacteria RepID=B2RMJ8_PORG3 Length = 953 Score = 980 bits (2533), Expect = 0.0, Method: Composition-based stats. Identities = 409/950 (43%), Positives = 566/950 (59%), Gaps = 31/950 (3%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 63 I ++GAR +NLKNI+L IPR KL+VVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ Sbjct: 16 IIIKGARVNNLKNISLTIPRGKLVVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 75 Query: 64 FLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCPDH 123 FL M KP+ D I G+ PAI+IEQ+ S NPRSTV T TEI++YLRLLFARVG P Sbjct: 76 FLGRMRKPECDLIAGVPPAIAIEQRVVSRNPRSTVATSTEIYEYLRLLFARVGRTISPRS 135 Query: 124 DVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARIDGEV 183 + TV+ +V V +P G +L LL + + + L+ QGY R + GE+ Sbjct: 136 GEEVKKHTVADLVAYVADRPIGSKLYLLVGLQAPQGRSLREHLQIQQQQGYTRIFVAGEM 195 Query: 184 CDLSDPPKLELQKKHTI--EVVVDRFKVRDD---LTQRLAESFETALELSGGTAVVADMD 238 + D E T +++DR + +D RLA+S ETA G ++ Sbjct: 196 KRIEDILSAETDFSDTASCFLLIDRLVIAEDKADYESRLADSAETAFFEGNGACLLRIES 255 Query: 239 -DPKAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQN 297 + EE +FS F G + +E P +FSFNNP GACPTC+G G D D V+ N Sbjct: 256 PEGTVEERMFSNVFE--ADGRTFQEPSPEMFSFNNPIGACPTCEGFGKVMGIDEDLVVPN 313 Query: 298 PELSLAGGAIRGWDRRNFYYFQM-LKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKENI 356 LS+ + W ++ + F V P+ LS ++ G Sbjct: 314 KSLSVYEECVACWIGAKSQMWKDYFIQKSVPLGFPVHKPYKELSDTERDMLWRGVPTGEP 373 Query: 357 EFKYMNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGTRLRR 416 ++ + G+ ++ R L F C C G RL+ Sbjct: 374 DYPSI--------------GIDDYFSMLQRDMHKIQNRVRLTHFRGKATCPDCRGMRLKP 419 Query: 417 EARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNVGLN 476 +A V + + ++ +++ FF L+L+ I+ ++L+EIG RL FL+ VGL Sbjct: 420 DALCVRIGGRNISELTALTVEETSAFFEGLQLSEDDLHISRRLLEEIGKRLSFLLEVGLG 479 Query: 477 YLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRD 536 YLTL R + TLSGGE+QRI LA+Q+G+ LVG +YVLDEPSIGLHQRD RL+G L LRD Sbjct: 480 YLTLDRLSNTLSGGESQRISLATQLGSSLVGSLYVLDEPSIGLHQRDTHRLIGVLKRLRD 539 Query: 537 LGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKR 596 LGNTV+VVEHDE+ IR+AD++IDIGP AG GGEVV G + I T Y++G+ Sbjct: 540 LGNTVVVVEHDEETIRSADYIIDIGPKAGRQGGEVVYAGEYDRIDKDTPGYTAAYLTGRE 599 Query: 597 KIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFP 656 KIE+P+ R +++ A +NLK V + P+ + T +TGVSGSGKSTL+ D + Sbjct: 600 KIELPRLR--RPWNSYIEVREASKHNLKGVNVRFPLHVLTVVTGVSGSGKSTLVRDLFYE 657 Query: 657 IAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFA 716 +R L G + A + ++ + +DQ+ GR+ RSNP TY G + +R+L++ Sbjct: 658 GVKRILEGGSTQGLACEGIVGDIKSVRDIQYVDQNNFGRSTRSNPVTYIGAYDDIRKLYS 717 Query: 717 GVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETL 776 +P S+ GY P FSFN GGRCE C+G+G I VEM F+ DI + C++C GKR+ +E L Sbjct: 718 ALPLSKQMGYQPYFFSFNKEGGRCEVCKGEGSIVVEMQFMADIVLECEECHGKRFRKEIL 777 Query: 777 EIKYKGKTIHEVLDMTIEEAREFFDAVP------ALARKLQTLMDVGLTYIRLGQSATTL 830 +++Y G I+++L+MT+ +A EFF P + KL+ L +VGL Y++LGQS++TL Sbjct: 778 DVEYCGANIYDLLEMTVNQAVEFFTDHPKAGYTDKIVEKLECLREVGLGYLKLGQSSSTL 837 Query: 831 SGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEH 890 SGGE QRVKLA L + TL+I DEPTTGLH DI+ LL L L D+G+++VV+EH Sbjct: 838 SGGENQRVKLAAYLGQAKPAPTLFIFDEPTTGLHIHDIRTLLHALSALIDKGHSVVVVEH 897 Query: 891 NLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLKPML 940 N+++IK+AD I+DLGPEGG GG ++ +GTPE V C+ S+T ++LK +L Sbjct: 898 NMEMIKSADCIIDLGPEGGGAGGYLVATGTPEEVMRCDTSYTGKWLKEIL 947 Score = 89.3 bits (220), Expect = 6e-16, Method: Composition-based stats. Identities = 47/166 (28%), Positives = 72/166 (43%), Gaps = 26/166 (15%) Query: 3 KIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYAR 62 IEVR A HNLK +N+ P L VVTG+SGSGKS+L D L+ EG +R +E S Sbjct: 613 YIEVREASKHNLKGVNVRFPLHVLTVVTGVSGSGKSTLVRD-LFYEGVKRILEGGST--- 668 Query: 63 QFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVG------ 116 Q L+ V I+ + ++Q + + RS T +D +R L++ + Sbjct: 669 QGLACEGI--VGDIKSVRDIQYVDQNNFGRSTRSNPVTYIGAYDDIRKLYSALPLSKQMG 726 Query: 117 -EPR----------CPDHDVPLAAQTVSQMVDNV---LSQPEGKRL 148 +P C + Q + ++ + GKR Sbjct: 727 YQPYFFSFNKEGGRCEVCKGEGSIVVEMQFMADIVLECEECHGKRF 772 Score = 81.6 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 44/125 (35%), Positives = 66/125 (52%), Gaps = 6/125 (4%) Query: 601 PKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQR 660 + P + E ++ + GAR NNLK+++LT+P G +TG+SGSGKS+L DTL+ QR Sbjct: 4 QESEHPTSGEAIIIIKGARVNNLKNISLTIPRGKLVVVTGLSGSGKSSLAFDTLYAEGQR 63 Query: 661 QLNGATIAEPAPYRDIQGLEHFDKV------IDIDQSPIGRTPRSNPATYTGVFTPVREL 714 + + A + D + I I+Q + R PRS AT T ++ +R L Sbjct: 64 RYVESLSAYARQFLGRMRKPECDLIAGVPPAIAIEQRVVSRNPRSTVATSTEIYEYLRLL 123 Query: 715 FAGVP 719 FA V Sbjct: 124 FARVG 128 >UniRef50_A3ZSW8 Excinuclease ABC subunit A n=1 Tax=Blastopirellula marina DSM 3645 RepID=A3ZSW8_9PLAN Length = 949 Score = 978 bits (2529), Expect = 0.0, Method: Composition-based stats. Identities = 387/956 (40%), Positives = 560/956 (58%), Gaps = 41/956 (4%) Query: 3 KIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYAR 62 I++RG HNLK ++L + KLIV G+SGSGK+S+A DTLYAEGQRRY+ES SAY R Sbjct: 5 SIQLRGVEVHNLKKVDLDLDHRKLIVFCGVSGSGKTSMALDTLYAEGQRRYIESFSAYTR 64 Query: 63 QFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCPD 122 QFL +EKP + I+G+ PA+++ + + S + RSTVGT TE DYLRLLFA+VGE CP Sbjct: 65 QFLERLEKPAAESIDGIPPALAVTRGNDSRSNRSTVGTATETTDYLRLLFAKVGEIICPC 124 Query: 123 HDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARIDGE 182 + T ++ +L ++ML P+ +++ + + +L G++R + Sbjct: 125 CGAKIQRDTPQEVAQRILEMNSPGKMMLTFPVAPDQEETWEQVVADLREDGFVRVISGQQ 184 Query: 183 VCDLS-DPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTA--------- 232 +L+ D +L ++ + DR +RL ES ETA G Sbjct: 185 TLNLTTDSQQLN---GGAVQAIADRLSGEGLKAERLQESLETAFLHGEGVCQLLVESEEL 241 Query: 233 -------VVADMDDPKAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGV 285 ++ +D ++S C C E EPRLF+FN+P GAC C+G G Sbjct: 242 NGAGDHGILQQIDGRSWRRHVYSNQLRCDTCNLEFIEPEPRLFNFNSPLGACQACEGFGN 301 Query: 286 QQYFDPDRVIQNPELSLAGGAIRGWDRRNFYY-FQMLKSLADHYKFDVEAPWGSLSANVH 344 D D ++ + +LA GAI W+ +++ + L +LA Y P+ L+ Sbjct: 302 VIDMDMDLIVPDVSKTLADGAIAPWNTPAYHHELEELLALAKDYDLPTNVPFRELTEEHL 361 Query: 345 KVVLYGSGKENIEFKYMNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNR 404 +++ G + F G+ + + +R L+++ S R Sbjct: 362 RLIREGVPERE------------------FGGLKGFFQWLERRKYKMHLRVFLSRWRSFR 403 Query: 405 PCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIG 464 C SC G RLR E+ V + + +S M I + EFF +LK+ + +A ++L ++ Sbjct: 404 DCESCHGKRLRPESLAVRIGGKNIAEVSKMKIRDSYEFFKSLKVDPRHQAVARQVLSQLL 463 Query: 465 DRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDN 524 DRLK+L VGL YL L R+ TLSGGEAQR+ L S +G+ LV ++YV DEPS+GLH D Sbjct: 464 DRLKYLNVVGLGYLALDRTIRTLSGGEAQRVALTSTLGSSLVNMLYVFDEPSVGLHPADV 523 Query: 525 ERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVP 584 ERL G + L GNTV++VEH+E IR AD +I+ GPGAG GGE++ +G + ++ Sbjct: 524 ERLAGAIRDLNKRGNTVVLVEHEESMIRRADEIIEFGPGAGERGGEIIFQGTPQELLTSE 583 Query: 585 ESLTGQYMSGKRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGS 644 E+LTG Y+ G+RK+ +KR +V ++ GARGNNLK++ + P+G+ +TGVSG+ Sbjct: 584 ETLTGDYLMGRRKVIHLEKRRETTHGRV-RIKGARGNNLKNIEVEFPLGVLCVVTGVSGA 642 Query: 645 GKSTLINDTLFPIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATY 704 GKSTL+++TL+P R+ + D+ G D V+ +DQSPIGR+PRSNP TY Sbjct: 643 GKSTLVDNTLYPALCRR-KRKEAPKALDCDDVFGDGQIDDVVLVDQSPIGRSPRSNPVTY 701 Query: 705 TGVFTPVRELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCD 764 F +R +FA ++R +T FSFNV GGRC+AC GDG I ++M FL D+Y+ C Sbjct: 702 IKAFDEIRSVFAATVQARTHNFTASHFSFNVNGGRCDACDGDGHIAIDMQFLADVYMKCP 761 Query: 765 QCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLG 824 +CKG+RY ++ LE+ Y+GK I EVL+MTI EA FF P + KLQ L+DVGL Y+RLG Sbjct: 762 ECKGRRYKKDVLEVLYRGKNIAEVLNMTIREAFVFFRGQPKVQSKLQRLIDVGLDYLRLG 821 Query: 825 QSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNT 884 Q A TLS GEAQR+KLA L+ G+TL++LDEPTTGLHFADI QLLD + L G++ Sbjct: 822 QPANTLSAGEAQRLKLAGYLASSKRGRTLFLLDEPTTGLHFADIAQLLDCFNSLLQVGHS 881 Query: 885 IVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLKPML 940 ++V+EHNL ++ AD+I+D+GP GG+++ +GTPE VA+ E S T R L L Sbjct: 882 LIVVEHNLHMMMAADYIIDMGPGAADEGGQVVATGTPEEVAQNENSRTGRALAEAL 937 >UniRef50_D0LQB5 Excinuclease ABC, A subunit n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LQB5_HALO1 Length = 996 Score = 976 bits (2522), Expect = 0.0, Method: Composition-based stats. Identities = 509/994 (51%), Positives = 657/994 (66%), Gaps = 63/994 (6%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 63 + VRGAR HNL N+++ IPRD L+V+TG SGSGKSSLAFDT+YAEGQRRYVESLSA+ARQ Sbjct: 5 LSVRGARVHNLANVDIDIPRDALVVITGPSGSGKSSLAFDTIYAEGQRRYVESLSAHARQ 64 Query: 64 FLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCPDH 123 +L LM +P+ D IEGLSPAI+I Q S NPRS+VGT+TEI+DYLRLL+ARVG C Sbjct: 65 YLELMARPECDSIEGLSPAIAIAQHSAVRNPRSSVGTLTEIYDYLRLLYARVGTVHCYQC 124 Query: 124 DVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARIDGEV 183 +AA TVS++VD + G R +++AP+I+ G H L L GY RA +DG + Sbjct: 125 GRVIAANTVSEIVDRTMELGTGARFIVVAPVIRGVAGTHADALGALLQAGYPRAVVDGTL 184 Query: 184 CDLSD-PPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVADMDDPKA 242 DL++ P+L+ HT+E+ VDR V+D +++RLA+S E AL L+ G + + A Sbjct: 185 LDLAEGIPELDEHAPHTVEIHVDRLIVKDGISRRLADSLELALGLADGQVWIHPV---GA 241 Query: 243 EELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPELSL 302 E +S FAC CG S ELEPR+FSFN+P GAC CDGLG DP RVI PELSL Sbjct: 242 EPERYSQRFACLACGISYPELEPRMFSFNSPHGACQRCDGLGELAALDPARVIPAPELSL 301 Query: 303 AGGAIRGWDRRNFYYFQMLKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKENI------ 356 + GAI R+ + + + +++ PW LSA VL G+ I Sbjct: 302 SAGAIAPLPPRSAL-GRRVAAACAARGIELDTPWRELSAEHQAFVLGGADDTVIGQSSDS 360 Query: 357 -------EFKYMNDRGDTSIRRHPFEGVLHNMERRYKETE-------SSAVR-------- 394 K + R PFEGVL + E E S R Sbjct: 361 STKTPAKTAKTKTTAKKAAARDRPFEGVLALLATELAEAEPREGDDPSDGERASKAKGKV 420 Query: 395 ---------------EELAKFISNRPCASCEGTRLRREARHVYVENTPLPAISDMSIGHA 439 +EL + PC +CEGTRLR EARHV V LPA+ + + A Sbjct: 421 TGKRPGKRSTAALSLDELRTCVRELPCPACEGTRLRVEARHVTVGGLALPAVCRLPLDEA 480 Query: 440 MEFFNNL-------KLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEA 492 + FF L L+ QRA IAE++L+EI RL FL VGL YL+L+R A TLSGGE+ Sbjct: 481 LAFFTELGQSDGEHSLSPQRAAIAERLLREIAGRLGFLQRVGLGYLSLARRASTLSGGES 540 Query: 493 QRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIR 552 QRIRLA+QIGA LVGV+YVLDEPS+GLH RD RL+ L+ LRDLGNTV+VVEHD D +R Sbjct: 541 QRIRLATQIGASLVGVLYVLDEPSVGLHPRDTRRLIDALLRLRDLGNTVLVVEHDPDTMR 600 Query: 553 AADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEVPKKRVPANPEKV 612 AAD+++DIGPGAGVHGG VVA GP +MA P SLTGQY+SG R + VP +R Sbjct: 601 AADYLVDIGPGAGVHGGRVVAHGPPAQVMADPASLTGQYLSGARALAVPPQR--RGGAHA 658 Query: 613 LKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNG------AT 666 L+L G R +NL+ V + +P+G C+TGVSGSGKS+LI TL P + +L G Sbjct: 659 LRLEGVRTHNLRGVDVAIPLGALVCVTGVSGSGKSSLITGTLLPALRARLTGGARGASRG 718 Query: 667 IAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESRARGY 726 + + + I+G++ D+V+ +DQ+PIGRTPRSNPATYTGVF +RE FA +PES+ARGY Sbjct: 719 VLDDGDFDAIRGVDQVDRVLSVDQAPIGRTPRSNPATYTGVFALIRERFAALPESKARGY 778 Query: 727 TPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKYKGKTIH 786 GR+SFNV+GGRCEACQGDGV+++EM+FLPD+YV C+ C G R++RETL+++YKG I Sbjct: 779 KSGRYSFNVKGGRCEACQGDGVLRIEMNFLPDVYVTCESCGGTRFSRETLDVRYKGLNIA 838 Query: 787 EVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSK 846 EVL + ++EA F+ AVP + +L+ L DVGL Y+ LGQ A TLSGGEAQR+KL+REL+K Sbjct: 839 EVLALRVDEALSFWQAVPQIRVRLEALRDVGLGYLTLGQPANTLSGGEAQRLKLSRELAK 898 Query: 847 RGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADWIVDLGP 906 + TG+T+YILDEPTTGLHF D+++LL VL L +QGNT++VIEH+LDVIKTAD ++D+GP Sbjct: 899 KSTGRTIYILDEPTTGLHFEDVRRLLHVLELLVEQGNTVLVIEHDLDVIKTADHVIDVGP 958 Query: 907 EGGSGGGEILVSGTPETVAECEASHTARFLKPML 940 EGG+ GG I+ +GTPE +A SHT R L P+L Sbjct: 959 EGGAAGGAIVAAGTPEDIAAAADSHTGRLLAPLL 992 Score = 93.5 bits (231), Expect = 4e-17, Method: Composition-based stats. Identities = 36/122 (29%), Positives = 59/122 (48%) Query: 2 DKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYA 61 + + G RTHNL+ +++ IP L+ VTG+SGSGKSSL TL + R + Sbjct: 657 HALRLEGVRTHNLRGVDVAIPLGALVCVTGVSGSGKSSLITGTLLPALRARLTGGARGAS 716 Query: 62 RQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCP 121 R L + + ++ + +S++Q PRS T T + +R FA + E + Sbjct: 717 RGVLDDGDFDAIRGVDQVDRVLSVDQAPIGRTPRSNPATYTGVFALIRERFAALPESKAR 776 Query: 122 DH 123 + Sbjct: 777 GY 778 Score = 74.3 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 38/117 (32%), Positives = 56/117 (47%), Gaps = 6/117 (5%) Query: 609 PEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIA 668 L + GAR +NL +V + +P ITG SGSGKS+L DT++ QR+ + A Sbjct: 1 MSPALSVRGARVHNLANVDIDIPRDALVVITGPSGSGKSSLAFDTIYAEGQRRYVESLSA 60 Query: 669 EPAPYRDIQGLEHFDKV------IDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVP 719 Y ++ D + I I Q R PRS+ T T ++ +R L+A V Sbjct: 61 HARQYLELMARPECDSIEGLSPAIAIAQHSAVRNPRSSVGTLTEIYDYLRLLYARVG 117 >UniRef50_C1A9P0 UvrABC system protein A n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A9P0_GEMAT Length = 958 Score = 975 bits (2520), Expect = 0.0, Method: Composition-based stats. Identities = 442/970 (45%), Positives = 595/970 (61%), Gaps = 53/970 (5%) Query: 2 DKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYA 61 D I +RGAR HNLK +L IPR + VVTG+SGSGKSSLAFDTLYAEGQRRYVESLSAYA Sbjct: 3 DTIRIRGARQHNLKGFDLDIPRRAITVVTGVSGSGKSSLAFDTLYAEGQRRYVESLSAYA 62 Query: 62 RQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCP 121 RQFL MEKP VD IEG+SPA++IEQK+ + RSTVGT TEI+DYLRLL+ARVG CP Sbjct: 63 RQFLERMEKPAVDSIEGISPAVAIEQKNPTRTSRSTVGTATEIYDYLRLLWARVGRTYCP 122 Query: 122 DHDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARI-- 179 L TV + D VL+ PEG R ++ P+++ K H ENL ++G++R + Sbjct: 123 KCGRELRPDTVQSVTDAVLALPEGTRFLVACPLVRSSKVSHAVIAENLRARGFVRVAVPA 182 Query: 180 --DGEVCDLSD--PPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTA--- 232 EV L D L L + + +VVDR +V R+A++ +TA G A Sbjct: 183 THGVEVLHLDDVTEETLNLATRENVSIVVDRLRVEPSARGRIADAVQTAFTEGDGDARIL 242 Query: 233 -------------VVADMDDPKAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPT 279 V +L F+ F CP G P+LFSFNNP GACPT Sbjct: 243 LTEAIVPPESIAERVGAAPGNAVWQLAFTERFECPNDGTRAPSPTPQLFSFNNPRGACPT 302 Query: 280 CDGLGVQQYFDPDRVIQNPELSLAGGAIRGWDRRNF-YYFQMLKSLADHYKFDVEAPWGS 338 C+G G +D ++ +PE SL GAI W + +++ A + PW + Sbjct: 303 CNGFGATLDYDLALIVPHPERSLRDGAIDPWTAPRYEKQRRLVVDFARTLGVSADVPWST 362 Query: 339 LSANVHKVVLYGSGKENIEFKYMNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELA 398 L A + +L + G+L +E ++ +R L Sbjct: 363 LPAEAQQKLL-------------------RTTSRAYTGILPFLEALEEKKYKQYIRIFLR 403 Query: 399 KFISNRPCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEK 458 ++ S RPC C GT+L+ EA V V+ + ++ + + + L L+G A IA+ Sbjct: 404 QYQSARPCRDCGGTKLQPEALQVRVDGRTIAEVAQWPVRDLRTWIDALTLSGSDAVIADA 463 Query: 459 ILKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIG 518 +L+E R +FL +VGL YLTL R+ TLSGGEAQRI L++ +GA LV YVLDEPSIG Sbjct: 464 VLREARARTRFLTDVGLTYLTLDRATRTLSGGEAQRITLSNALGAALVDATYVLDEPSIG 523 Query: 519 LHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLE 578 LH RD +RLL L LRDLGNTV++VEHD +A+R AD+++++GP AG HGG+VV GP+ Sbjct: 524 LHSRDLDRLLSLLTRLRDLGNTVVMVEHDLEAMRIADYMVEMGPAAGEHGGQVVFAGPMA 583 Query: 579 AIMAVPESLTGQYMSGKRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCI 638 + P LTGQY++G R+IEVP KR + L+L GAR +N+ V L +P+G T + Sbjct: 584 DVEQSP--LTGQYLTGARRIEVPTKRR-PVGPRWLELKGARAHNVHGVDLRIPLGAMTVV 640 Query: 639 TGVSGSGKSTLINDTLFPIAQRQLNGATIAEP------APYRDIQGLEHFDKVIDIDQSP 692 TGVSGSGKST+++D LF + +L+G A+ Y + G EH D V+ +DQSP Sbjct: 641 TGVSGSGKSTMVHDVLFHALESRLHGEHSAKEHLGETVGGYTSLTGFEHLDDVVLVDQSP 700 Query: 693 IGRTPRSNPATYTGVFTPVRELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVE 752 IG++PRSNP TY F VR LFA P S+ +G+ G FSFNV GGRC+ C+G G I+VE Sbjct: 701 IGKSPRSNPVTYVKAFDEVRRLFAESPLSKTKGFAAGHFSFNVAGGRCDHCEGAGAIEVE 760 Query: 753 MHFLPDIYVPCDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQT 812 M F+ D++VPCD C GKR+ E LE++ +GK I +VL++T++EA FF LA+ L Sbjct: 761 MVFMADVFVPCDACGGKRFKPEVLEVRVRGKNIADVLELTVDEAIRFFPREDKLAQALWH 820 Query: 813 LMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQ--TLYILDEPTTGLHFADIQQ 870 + VGL Y+RLGQ ATTLSGGEAQR+K+AREL+ G LY++DEPTTGLH DI++ Sbjct: 821 VQQVGLGYLRLGQPATTLSGGEAQRLKIARELALTARGAARKLYVMDEPTTGLHLEDIRR 880 Query: 871 LLDVLHKLRDQGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEAS 930 L V +L QG+T+++IEH+LDVIK ADWIVD+GP+GG GGG+++ G PE + + AS Sbjct: 881 LAQVFERLLSQGHTLLLIEHHLDVIKLADWIVDMGPDGGDGGGQVVAMGRPEEIVQVAAS 940 Query: 931 HTARFLKPML 940 HT R+L+ +L Sbjct: 941 HTGRWLRTVL 950 >UniRef50_B5JM86 Excinuclease ABC, A subunit n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JM86_9BACT Length = 949 Score = 974 bits (2518), Expect = 0.0, Method: Composition-based stats. Identities = 449/944 (47%), Positives = 607/944 (64%), Gaps = 13/944 (1%) Query: 2 DKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYA 61 + I ++GAR HNLKNI L IPR+KL+V+TG+SGSGKSSLAFDTLYAEG R+YVESLS A Sbjct: 9 EYIHIKGAREHNLKNIELRIPRNKLVVITGVSGSGKSSLAFDTLYAEGYRKYVESLSTQA 68 Query: 62 RQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCP 121 RQ + +++PDVD I GLSP ++IEQ++++ +PRST+ T+TEI DY RLL+ GE RCP Sbjct: 69 RQVMDQLKRPDVDFIHGLSPVLAIEQRASNASPRSTIATVTEIADYARLLWVIRGEQRCP 128 Query: 122 DHDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARIDG 181 + QT+ VD L PE R M+LAP ++ + + L L +G+ R RI G Sbjct: 129 KDGGIIQRQTLDGAVDQALQLPERSRAMVLAPYMEAKPAVLREELPRLRQKGFQRVRIAG 188 Query: 182 EVCDLSDPPKLELQK-KHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVADMD-- 238 E+ ++ DP + +++VVDR + D RLA+S E A A+V + Sbjct: 189 EIVEVDDPEAATKGRSAVQMDIVVDRLVIGPDQRSRLADSLELAFSEGKDRALVLYQESR 248 Query: 239 DPKAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNP 298 D +EL S NF+C CG + PR FSFN G+CP C GLG + F + V+ +P Sbjct: 249 DADWQELSLSRNFSCSDCGEVYEPVTPRHFSFNTAEGSCPECGGLGETRRFLDELVVPDP 308 Query: 299 ELSLAGGAIRGWDRRNF----YYFQMLKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKE 354 S+ GA++ + +L+ LA+ FD PW L + +L+G Sbjct: 309 SKSVKKGALKPLRIGGKQLIIRHNALLRQLAEQLPFDPLTPWEDLPEETRQQILHGVPDR 368 Query: 355 NIEFKYMNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGTRL 414 EFK R T PFEG++ + + +ET+S R L + + + C C G R Sbjct: 369 EFEFKLT--RRKTKPAPAPFEGIVPILMKAARETKSDGYRARLMTYQTEQDCPGCHGHRF 426 Query: 415 RREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNVG 474 + +V+V+ LP M I A F + L A ++++ I RL+FL VG Sbjct: 427 SPRSANVFVDGVSLPEFLAMDIEKAYAFVSKLDRASSEVSTYGEVIEGIEFRLRFLKEVG 486 Query: 475 LNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHL 534 L+YLTL+R TLSGGE+QR+RLA+Q+G L+GV+YVLDEPSIGLH +DN +L+ TL L Sbjct: 487 LDYLTLNRGYGTLSGGESQRVRLATQLGMSLMGVVYVLDEPSIGLHAKDNLKLVQTLKEL 546 Query: 535 RDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESL--TGQYM 592 RD+GN+VIVVEHDE+ +RAADH+I+IGPGAG+HGGEV+ EG + + P+ + TG Y+ Sbjct: 547 RDVGNSVIVVEHDEEMMRAADHLIEIGPGAGLHGGEVLYEGDPKKCIGNPDRMQSTGAYL 606 Query: 593 SGKRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLIND 652 SGK ++ EK +++ A +NLK+ T +PVGL TC+TGVSGSGKSTL+ND Sbjct: 607 SGK-QVLTKGVPTLELTEKWIEIKEASHHNLKNATARIPVGLLTCVTGVSGSGKSTLVND 665 Query: 653 TLFPIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVR 712 L A R+LN + P ++ I G E+F++V+ + Q PIG++PRSNPATYT +F +R Sbjct: 666 ILAKAAARKLNRSKDI-PGAHKGIDGFEYFERVVRVSQEPIGQSPRSNPATYTKLFDELR 724 Query: 713 ELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYN 772 L+ VP SR RGY GRFSFN+RGGRCE CQG G IK++M F+ D Y+ C C GKRYN Sbjct: 725 TLYTKVPLSRTRGYKAGRFSFNIRGGRCERCQGQGAIKLDMLFMSDAYIECPSCNGKRYN 784 Query: 773 RETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSG 832 RETLE KY G I E L+++++EA E F VP + KL TL VGL Y++LGQ+A TLSG Sbjct: 785 RETLEAKYGGINIAEALELSVDEACEKFKNVPRIIEKLNTLEQVGLGYLKLGQAANTLSG 844 Query: 833 GEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNL 892 GEAQR+KL+ ELSKR +G+ LYILDEPTTGLH+ADIQ+L D+L +LRDQGNT+VVIEH+L Sbjct: 845 GEAQRLKLSLELSKRNSGKNLYILDEPTTGLHWADIQRLSDLLFRLRDQGNTVVVIEHHL 904 Query: 893 DVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFL 936 D I ADW +DLGP GGS GGE++ SG+ + + +C S T L Sbjct: 905 DFIGLADWAIDLGPGGGSRGGEVVYSGSVDGMLKCRRSETGMAL 948 Score = 158 bits (399), Expect = 1e-36, Method: Composition-based stats. Identities = 77/197 (39%), Positives = 104/197 (52%), Gaps = 17/197 (8%) Query: 400 FIS--NRPCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAE 457 F+S C SC G R RE + ++S+ A E F N+ Sbjct: 767 FMSDAYIECPSCNGKRYNRETLEAKYGGINIAEALELSVDEACEKFKNVPR--------- 817 Query: 458 KILKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGV-MYVLDEPS 516 I ++L L VGL YL L ++A TLSGGEAQR++L+ ++ G +Y+LDEP+ Sbjct: 818 -----IIEKLNTLEQVGLGYLKLGQAANTLSGGEAQRLKLSLELSKRNSGKNLYILDEPT 872 Query: 517 IGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGP 576 GLH D +RL L LRD GNTV+V+EH D I AD ID+GPG G GGEVV G Sbjct: 873 TGLHWADIQRLSDLLFRLRDQGNTVVVIEHHLDFIGLADWAIDLGPGGGSRGGEVVYSGS 932 Query: 577 LEAIMAVPESLTGQYMS 593 ++ ++ S TG +S Sbjct: 933 VDGMLKCRRSETGMALS 949 Score = 74.6 bits (182), Expect = 1e-11, Method: Composition-based stats. Identities = 57/267 (21%), Positives = 95/267 (35%), Gaps = 39/267 (14%) Query: 604 RVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLN 663 R + + + + GAR +NLK++ L +P ITGVSGSGKS+L DTL+ R+ Sbjct: 2 RPVLSQSEYIHIKGAREHNLKNIELRIPRNKLVVITGVSGSGKSSLAFDTLYAEGYRKYV 61 Query: 664 GATIAEPAPYRDIQGLEHFD------KVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAG 717 + + D D V+ I+Q +PRS AT T + R L+ Sbjct: 62 ESLSTQARQVMDQLKRPDVDFIHGLSPVLAIEQRASNASPRSTIATVTEIADYARLLWVI 121 Query: 718 VPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPD----IYVPCDQCKGKRYNR 773 E R GG + DG + + + P + K Sbjct: 122 RGEQRCP----------KDGGIIQRQTLDGAVDQALQLPERSRAMVLAPYMEAKPAVLRE 171 Query: 774 ETLEIKYKG----KTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATT 829 E ++ KG + E++++ EA + + + L V Sbjct: 172 ELPRLRQKGFQRVRIAGEIVEVDDPEAATKGRSAVQMDIVVDRL--VIGPD--------- 220 Query: 830 LSGGEAQRVKLARELSKRGTGQTLYIL 856 + R+ + EL+ +L Sbjct: 221 ----QRSRLADSLELAFSEGKDRALVL 243 >UniRef50_C2M987 Excinuclease ABC subunit A n=1 Tax=Porphyromonas uenonis 60-3 RepID=C2M987_9PORP Length = 959 Score = 967 bits (2501), Expect = 0.0, Method: Composition-based stats. Identities = 410/954 (42%), Positives = 559/954 (58%), Gaps = 33/954 (3%) Query: 1 MDKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAY 60 ++ I +RG R +NLK I+L IPR +L+V+TG+SGSGKSSLAFDTLYAEGQRRYV+SLS+Y Sbjct: 20 LNDIIIRGCRVNNLKGIDLDIPRGELVVITGVSGSGKSSLAFDTLYAEGQRRYVDSLSSY 79 Query: 61 ARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRC 120 ARQFL M+KP+ D I+ L PA++IEQ+ S NPRSTVGT +EI DYLR+L ARVG+ Sbjct: 80 ARQFLMRMKKPECDQIKNLPPAVAIEQRVVSRNPRSTVGTSSEIDDYLRVLMARVGKLYS 139 Query: 121 PDHDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARID 180 P + T + +V+ P +L +LA + + L L QGY R ID Sbjct: 140 PISGELVKRHTAADVVEAAHQIPTDSKLYILADLYPPEGRRLIEHLMLLQGQGYNRVLID 199 Query: 181 GEVCDLSDPPKLELQKKHTIEVVVDRFKVRDDL---TQRLAESFETALELSGGTAVVADM 237 V + D EL++ ++++VDR VR RL +S E AL T + Sbjct: 200 DTVYRIEDVSNKELREAKQVQLIVDRLTVRTGDDSYESRLGDSVEIALYEGRETCALRWQ 259 Query: 238 DDPKAE----ELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDR 293 D A FSA F G + E P LF+FN+PAGAC C G G DP+R Sbjct: 260 DSEGAWSSEGRRNFSARFE--ADGRTFTEPTPDLFNFNSPAGACTVCGGFGSILGIDPER 317 Query: 294 VIQNPELSLAGGAIRGWDR-RNFYYFQMLKSLADHYKFDVEAPWGSLSANVHKVVLYGSG 352 VI + LSL G + W ++ + + A + F + P+ L+ ++ Sbjct: 318 VIPDDSLSLYEGCVDCWRGAKSSEWAKAFIHEAKRFDFPIHTPYAELTQEQRDLL----- 372 Query: 353 KENIEFKYMNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGT 412 + + G+ K+ R LA + C +C G Sbjct: 373 --------WHGHEGGGWGKGTLYGIDDYFAMLQKDIYKIQNRVRLAHYRGKSECYACHGG 424 Query: 413 RLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDRLKFLVN 472 RL+ +A I MSI A+ FF + AKIAE+ LKEI +RL+ L + Sbjct: 425 RLKEDALLFTYMGKNFHQIGQMSIREALTFFAQELEDPEEAKIAERPLKEIRNRLRTLDS 484 Query: 473 VGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLI 532 VGL YLTL R + TLSGGE+QRI LA+++G LVG MY+LDEPSIGLH RD +RL+ + Sbjct: 485 VGLGYLTLDRRSNTLSGGESQRINLATRLGNSLVGSMYILDEPSIGLHDRDTDRLISVIK 544 Query: 533 HLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYM 592 LRD GNTVIVVEHDE IRAAD++ID+G AG GGEV+ G I A T Y+ Sbjct: 545 ELRDQGNTVIVVEHDELTIRAADYLIDMGLDAGRLGGEVIYHGKPSDITAETPGYTAAYL 604 Query: 593 SGKRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLIND 652 +G+ +I VPK R P + + NNLK + +P+ T +TGVSGSGKSTLI+D Sbjct: 605 TGREEILVPKHRRPVQRKLTMH--HVHKNNLKGFDVDIPLFNMTVVTGVSGSGKSTLISD 662 Query: 653 TLFPIAQRQLNGATIAEPAPYRDIQG-LEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPV 711 L QR +N R + G ++ ++V+ +DQ+ +GR+ RSNP TY FTP+ Sbjct: 663 LLVEELQRIINAR--PRETQSRMLTGDVDLVEQVLYVDQNSVGRSTRSNPVTYIDAFTPI 720 Query: 712 RELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRY 771 REL+A P ++ GY P FSFN GGRCE C+GDGV++V M F+ DI + CD C+GKR+ Sbjct: 721 RELYADQPLAKQMGYKPYFFSFNKEGGRCEVCKGDGVVEVPMQFMTDITLVCDACEGKRF 780 Query: 772 NRETLEIKYKGKTIHEVLDMTIEEAREFFDAVPA-----LARKLQTLMDVGLTYIRLGQS 826 + LE+ Y G I+++L+MT+++A EFF PA + R L+ L VGL Y++LGQ+ Sbjct: 781 QKNILEVTYHGVNIYDLLEMTVDQAIEFFTKYPADQTTSIIRLLEGLQRVGLGYLQLGQN 840 Query: 827 ATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIV 886 ++TLSGGE QR+KLA L + TL++ DEPTTGLHF DI LL L DQG++++ Sbjct: 841 SSTLSGGENQRLKLAYYLGRDHEPHTLFVFDEPTTGLHFHDISTLLAAFRDLIDQGHSVL 900 Query: 887 VIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLKPML 940 +IEHN++VIK+AD+I+DLGP+GG GG+++V+GTPE VA C S T +LK L Sbjct: 901 IIEHNMEVIKSADYIIDLGPDGGDKGGQLVVAGTPEEVAACPDSITGHYLKEKL 954 >UniRef50_Q6MRC9 Excinuclease ABC subunit A n=1 Tax=Bdellovibrio bacteriovorus RepID=Q6MRC9_BDEBA Length = 982 Score = 962 bits (2486), Expect = 0.0, Method: Composition-based stats. Identities = 407/997 (40%), Positives = 581/997 (58%), Gaps = 78/997 (7%) Query: 1 MDKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAY 60 M I + G + +NLKNI + IP + V+ G SGSGKSSLAF+TL+AEGQRR++ES+S Y Sbjct: 1 MKDIHLWGVKQNNLKNIEVKIPVGSMTVICGPSGSGKSSLAFETLFAEGQRRFIESMSNY 60 Query: 61 ARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRC 120 ARQFL+ KPD++ I + PAISIEQK+T + RSTVGT TEI DYLRLL+ ++G+ C Sbjct: 61 ARQFLNKAPKPDIEGINNIPPAISIEQKNTVKSSRSTVGTTTEIIDYLRLLYEKIGKSYC 120 Query: 121 PDHDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERK-GEHTKTLENLASQGYIRARI 179 P H P ++V++ D VL GKR LL I E + E K L GY+R I Sbjct: 121 PTHHCPTEKESVTEATDKVLKNFAGKRGYLLVEINSEGRVAEGKKLHSLLLQDGYLRIYI 180 Query: 180 D----------------------------------------------GEVCDLSDPPKLE 193 G V ++ + ++ Sbjct: 181 PKVTEVKKPAAKAAGKKTKASGKKASKKVETPEIVATHPGGLTNEEMGTVVEIGEAAAIK 240 Query: 194 LQ-KKHTIEVVVDRFKVRDDLTQRLAESFETALELS--GGTAVV---ADMDDPKAEELLF 247 K T +V+DR +D RLA+S A E S T ++ A + E L Sbjct: 241 KGLPKETFYLVIDRMSFNEDERGRLADSLTQAYEASIKYNTHLITRRATILSTDGERLQV 300 Query: 248 SANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPELSLAGGAI 307 S +CP+CGY+ L +LFSFN+P GACPTC G G D ++VI NP LSLA GA+ Sbjct: 301 SEEASCPVCGYTPPPLSSKLFSFNSPIGACPTCKGFGNILDIDEEKVIPNPNLSLAQGAL 360 Query: 308 RG-WDRRNFYYFQMLKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKENIEFKYMNDRGD 366 W + + L + K D PW L V+ G+ Sbjct: 361 SPFWMPSAAHEKKQLLAYCKKTKIDTHTPWKDLPKAERDVIWNGNKD------------- 407 Query: 367 TSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGTRLRREARHVYVENT 426 F GV E + VR +++F S C +C+G RLR EA HV + N+ Sbjct: 408 -------FFGVRGLFEYLDQIKYKMHVRVFISRFRSPFQCPTCKGARLRTEANHVLIANS 460 Query: 427 PLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTLSRSAET 486 + +S+++I FF L++ + ++A ++LK+I RL+FL+ VG++YL+L R T Sbjct: 461 NINDLSNLTIEDLNTFFQKLEVTPFQQEVAGEVLKQIRSRLEFLMRVGVHYLSLGRETRT 520 Query: 487 LSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEH 546 LSGGE QR+ LA+Q+G GL +YVLDEP++GLH RDN+RL+ L L+DLGNT+++VEH Sbjct: 521 LSGGEYQRLILANQLGMGLSQALYVLDEPTVGLHPRDNDRLISILKDLKDLGNTLVIVEH 580 Query: 547 DEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRK---IEVPKK 603 D D I+A++H+I++GPG+G GGEVV G E +S T ++ + + + Sbjct: 581 DHDVIKASEHIIEMGPGSGYLGGEVVYSGTTEKFYDYEKSNTVPFLKPSKNWQALRTIRP 640 Query: 604 RVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLN 663 N + ++L GA+G+NLK++ +T P+ +TGVSGSGKSTLI+ TL+P R L+ Sbjct: 641 VDVDNYKVKIELKGAKGHNLKNLDVTFPLNRLVTVTGVSGSGKSTLISKTLYPALARALD 700 Query: 664 GATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESRA 723 + Y + G+EH V+ IDQSPIG++ RS+P TY F +R + + PES++ Sbjct: 701 IEYMP-AQDYSGLDGVEHIKNVLLIDQSPIGKSARSSPITYLKAFDAIRMIMSTTPESQS 759 Query: 724 RGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKYKGK 783 RGYT G FS NV GGRC AC+G G +++M F+ ++ +PCD C GK+Y E LEI+YK K Sbjct: 760 RGYTAGTFSLNVDGGRCPACKGTGYEEIDMMFMDNVVIPCDVCDGKKYRPEILEIQYKNK 819 Query: 784 TIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARE 843 IHE+L MT+ EA FF A P + + L L +VGL Y++LGQ A +LSGGE+QR+K+A+E Sbjct: 820 NIHEILSMTVNEAMNFFVAHPNIRKPLSVLKEVGLDYLQLGQPANSLSGGESQRLKIAKE 879 Query: 844 LSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADWIVD 903 LS+ TLYILDEPTTGLHF +++ L+ VL+KL + G ++VV+EHNLDVI+ +D+++D Sbjct: 880 LSQVQQKSTLYILDEPTTGLHFREVELLMKVLNKLIETGGSVVVVEHNLDVIRGSDYVID 939 Query: 904 LGPEGGSGGGEILVSGTPETVAECEASHTARFLKPML 940 LGPE G GG I+ +GTP+ + + + S T ++LK + Sbjct: 940 LGPEAGKKGGNIVATGTPDDIMKVKKSLTGQYLKRYI 976 >UniRef50_B1XYK7 Excinuclease ABC, A subunit n=2 Tax=Burkholderiales Genera incertae sedis RepID=B1XYK7_LEPCP Length = 1935 Score = 947 bits (2449), Expect = 0.0, Method: Composition-based stats. Identities = 384/988 (38%), Positives = 530/988 (53%), Gaps = 73/988 (7%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 63 I +RGAR HNLKN++L I +L VVTG SGSGKSSL FDTLYAEGQRRYVE+ SAYARQ Sbjct: 17 IRIRGARQHNLKNLDLDIRTGELTVVTGPSGSGKSSLVFDTLYAEGQRRYVETFSAYARQ 76 Query: 64 FLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCPDH 123 FL M++P VD +EG+ PAI+I+Q + RSTVGT+TE++D+L+LLFAR + D Sbjct: 77 FLDRMDRPAVDSVEGVPPAIAIDQTNPVRTSRSTVGTMTELNDHLKLLFARAAQLFDQDT 136 Query: 124 DVPLAAQTVSQMVDNVLSQPE---GKRLMLLAPIIKERKGEHTKTLENLASQGYIRARID 180 P+ + ++ ++ E RL++ P+ + + L++ GY R + Sbjct: 137 AQPVREDDPDTIWADLKARSEAAGDPRLVITFPVELPAGTTPAEIEQWLSASGYTRVHAE 196 Query: 181 GEVCDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGT-AVVADMDD 239 EV + P K+ ++VV DRF+ R+ E+ ETAL+ G V D Sbjct: 197 REVATPTGPRKV-------LDVVADRFRFSGAEKIRVNEALETALKRGGRCNVYVVPTDG 249 Query: 240 PKAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPE 299 + +S CP +P +FSFN+ GAC TC G G D VI +P Sbjct: 250 GDEQVWRYSQGLHCPESDRRYSHPQPAMFSFNSAFGACETCRGFGRVIGVDFGLVIPDPR 309 Query: 300 LSLAGGAIRGWDRRNFYYFQM-LKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKENIEF 358 +L GGAI+ + Q L A ++ W LS + V+ GS ++ Sbjct: 310 KTLRGGAIKPLTTPAWKECQDDLIKYAGDAGIPRDSAWAQLSESQKSWVIDGSPNWTGKW 369 Query: 359 KYMNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGTRLRREA 418 + G+ E + +R L+K+ S PC C G RL+ E+ Sbjct: 370 ------------NQQWYGIKRFFEYLESKAYKMHIRVLLSKYRSYTPCGDCGGARLKTES 417 Query: 419 RHVYVE-------------------------------NTPLPAISDMSIGHAMEFFNNLK 447 + L + + I FF+ L Sbjct: 418 LLWRLGEKQQADLGLPPAKRFMPVGVKWSRAQLEALPGLSLHDLMLLPIDRMRVFFDKLD 477 Query: 448 LAGQRAKIAEKILK-EIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLV 506 L Q A ++L EI RLK+L +VGL YL+L R + TLSGGE QRI L + +G LV Sbjct: 478 LPSQMLDDALQLLLDEIRTRLKYLCDVGLGYLSLDRQSRTLSGGEVQRINLTTALGTSLV 537 Query: 507 GVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGV 566 ++VLDEPSIGLH RD R+ ++ LRD GNT++VVEHD + AAD VID+GPG G Sbjct: 538 NTLFVLDEPSIGLHPRDMHRINEAMLRLRDAGNTLVVVEHDPAVMLAADRVIDLGPGPGT 597 Query: 567 HGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEVPKKRVPANPEKVLKLTGARGNNLKDV 626 GG +V +G E + A E+LTG Y+ +R I + R + L + G R +NLK++ Sbjct: 598 QGGRIVFDGTPEDLKAA-ETLTGAYLGARRSIGLGLMRPVLDSTPRLIIEGVREHNLKNI 656 Query: 627 TLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAEPAPYRDIQGLEHFDKVI 686 ++ P+ C+TGVSGSGKSTL+ D L+P R A+ P + + G + + Sbjct: 657 SVEFPLQRLVCVTGVSGSGKSTLMQDVLYPALARHFGQAS-ESPGEHDRLLGADWISDAV 715 Query: 687 DIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESRARGYTPGRFSFNVRGGRCEACQGD 746 +DQSPIG+T RSNPA+Y G F VR++FA +P ++ R YT G FSFN GRC C G Sbjct: 716 FVDQSPIGKTARSNPASYVGAFDTVRDIFAALPAAQQRNYTAGMFSFNAGDGRCPTCGGS 775 Query: 747 GVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKY----KGKTIHEVLDMTIEEAREFFDA 802 G VEM FL D+Y+ C C G RY E E+K K +I +VL++T+ +A F Sbjct: 776 GFEHVEMQFLSDVYLRCPDCDGTRYRPELREVKVERLGKSLSISDVLELTVADAVRLFAD 835 Query: 803 VPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELS-----------KRGTGQ 851 + R LQ L DVGL Y++LGQ TLSGGEAQR+KLA L+ K Sbjct: 836 DREVVRALQPLADVGLDYVKLGQPVPTLSGGEAQRLKLAGFLAEAAKSGSASKQKLARKG 895 Query: 852 TLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADWIVDLGPEGGSG 911 TL++ DEPTTGLHF DI +L+ KL + G++++VIEHNLDV++ +DWIVDLGPEGG Sbjct: 896 TLFLFDEPTTGLHFDDIAKLMRAFRKLLEAGHSLLVIEHNLDVVRASDWIVDLGPEGGEA 955 Query: 912 GGEILVSGTPETVAECEASHTARFLKPM 939 GGE++ GTP + SHT + L+ Sbjct: 956 GGELVAEGTPADLRAHPTSHTGQSLREY 983 Score = 766 bits (1977), Expect = 0.0, Method: Composition-based stats. Identities = 387/985 (39%), Positives = 535/985 (54%), Gaps = 118/985 (11%) Query: 2 DKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYA 61 + I++ AR HNLK +++ IPR K VVTG+SGSGKS+LAFD L+ EGQRRY+ESL+AYA Sbjct: 1021 EMIQIVNAREHNLKGLSVNIPRGKFSVVTGVSGSGKSTLAFDILFNEGQRRYLESLNAYA 1080 Query: 62 RQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCP 121 R + +P+VD + G+ P ++IEQ+ + +STV T TE+ +LRLL+ ++G CP Sbjct: 1081 RSIVQPAGRPEVDAVYGIPPTVAIEQRLSRGGRKSTVATTTEVWHFLRLLYVKLGTLYCP 1140 Query: 122 DHD------------------VPLAAQTVSQMVDNVLSQP-----EGKRLMLLAPIIKER 158 V + QT Q+ +L P G+ + LLAP++ R Sbjct: 1141 KCSDFHAPHGDVAPGQDPDGWVAVRPQTPEQIAAQMLRAPEAGGYRGQHIGLLAPLVVNR 1200 Query: 159 KGEHTKTLENLASQGYIRARIDGEVCDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLA 218 KG +T + +GY R+DGE PK++ K+HTIE+ V V D L Sbjct: 1201 KGVYTDLAKWAKGKGYTHLRVDGEFLPTDKWPKIDRYKEHTIELPVADLIVEVDNEPLLK 1260 Query: 219 ESFETALELSGGTAVVADMDDPKAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACP 278 ALE G + A G R ++FS ACP Sbjct: 1261 AKLAEALEHGKGVLHLLTPLKG------LKTAMAAGESGRIGRT---QVFSI---KRACP 1308 Query: 279 TCDGLGVQQ-YFDPDRVIQNPELSLAGGAIRGWDRRNFYYFQMLKSLADHYKFDVEAPWG 337 C G DP + + GW L Sbjct: 1309 QC---GTSYPELDPRM--------FSYNSKHGWCVDCV--GTGLT--------------- 1340 Query: 338 SLSANVHKVVLYGSGKENIEFKYMNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREEL 397 L+ K + ++ + + Sbjct: 1341 -LTREQRKALDDTQQDDDNKGREKTFAEPEVED--------------------------- 1372 Query: 398 AKFISNRPCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAE 457 + + PC +C G RL ++ V + A++ +S+ A + KL G+ IA Sbjct: 1373 ---LVDAPCGTCHGARLNPVSQAVRFRGESIAALAALSVNDAARWVARQKLDGREGAIAR 1429 Query: 458 KILKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSI 517 ++ EI RL FL VGL YLTL R+A TLSGGEAQRIRLA+Q+G+ L GV YVLDEP+I Sbjct: 1430 DVVSEIRSRLSFLDEVGLGYLTLDRAAPTLSGGEAQRIRLAAQLGSNLQGVCYVLDEPTI 1489 Query: 518 GLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPL 577 GLH RDN+ LL L L GNT++VVEHDED IR ADH+IDIGPGAG GG ++AEG Sbjct: 1490 GLHPRDNQVLLNALHKLGASGNTLVVVEHDEDTIRRADHIIDIGPGAGRRGGRIMAEGTA 1549 Query: 578 EAIMAVPESLTGQYMSGKRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTC 637 +M P+S+TG++++ K + +R L L GA+ +NL+DV + +P+ Sbjct: 1550 AELMLHPDSITGRFLNAPLKHPLKARRPVDAQTPGLTLRGAKLHNLRDVDVEVPLARLVA 1609 Query: 638 ITGVSGSGKSTLINDTLFPIAQRQLNGATIAEPAPYRD-------IQGLEHFDKVIDIDQ 690 +TGVSGSGKSTL D L Q +N + A R ++G + D+V+++DQ Sbjct: 1610 VTGVSGSGKSTLARDVLLANVQAIVNHKLAGKNAGARPAWTGCTGLEGWSNVDRVLEVDQ 1669 Query: 691 SPIGRTPRSNPATYTGVFTPVRELFAGVPESRARGYTPGRFSFNV------RGGRCEACQ 744 +PIG+TPRS PATY G + +R+LF E++ARGY GRFSFN+ GGRC C+ Sbjct: 1670 TPIGKTPRSCPATYIGFWDTIRKLFTETLEAKARGYAAGRFSFNIGGKSAGGGGRCPGCE 1729 Query: 745 GDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAVP 804 G G+ +EM FLPD+ VPCD C G R+N ETL + ++GK+I EVL M ++EA +FF ++P Sbjct: 1730 GQGMRTIEMAFLPDVKVPCDLCHGARFNPETLAVTWRGKSIGEVLQMEVDEAVDFFASMP 1789 Query: 805 ALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSK---------RGTGQTLYI 855 ++A LQ L DVGL Y+ LGQ + TLSGGEAQR+KL ELSK + TLY+ Sbjct: 1790 SIAHPLQLLKDVGLGYLTLGQPSPTLSGGEAQRIKLVTELSKVRDDVTRRGQKAPHTLYV 1849 Query: 856 LDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEI 915 LDEPT GLH AD+++L+ VLH+L D G++++VIEH+LDVI ADW++DLGPEGGSGGG++ Sbjct: 1850 LDEPTVGLHMADVEKLIKVLHRLVDGGHSVIVIEHDLDVIAEADWVIDLGPEGGSGGGQV 1909 Query: 916 LVSGTPETVAECEASHTARFLKPML 940 +V GTPE V + SHT LK +L Sbjct: 1910 VVCGTPEAVVKS-RSHTGVALKAVL 1933 Score = 205 bits (523), Expect = 6e-51, Method: Composition-based stats. Identities = 106/357 (29%), Positives = 172/357 (48%), Gaps = 58/357 (16%) Query: 403 NRPCASCEGTRLRREARHVYV----ENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEK 458 C C+GTR R E R V V ++ + + ++++ A+ F + Sbjct: 789 YLRCPDCDGTRYRPELREVKVERLGKSLSISDVLELTVADAVRLFAD------------- 835 Query: 459 ILKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIG------------AGLV 506 +E+ L+ L +VGL+Y+ L + TLSGGEAQR++LA + Sbjct: 836 -DREVVRALQPLADVGLDYVKLGQPVPTLSGGEAQRLKLAGFLAEAAKSGSASKQKLARK 894 Query: 507 GVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGV 566 G +++ DEP+ GLH D +L+ L + G++++V+EH+ D +RA+D ++D+GP G Sbjct: 895 GTLFLFDEPTTGLHFDDIAKLMRAFRKLLEAGHSLLVIEHNLDVVRASDWIVDLGPEGGE 954 Query: 567 HGGEVVAEGPLEAIMAVPESLTGQYMSG----------------------KRKIEVPKKR 604 GGE+VAEG + A P S TGQ + K + + K+ Sbjct: 955 AGGELVAEGTPADLRAHPTSHTGQSLREYDLSLGTGGIAVEEGRPLQWVVKARRDEAKRA 1014 Query: 605 VPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNG 664 V ++++++ AR +NLK +++ +P G F+ +TGVSGSGKSTL D LF QR+ Sbjct: 1015 VGNIADEMIQIVNAREHNLKGLSVNIPRGKFSVVTGVSGSGKSTLAFDILFNEGQRRYLE 1074 Query: 665 ATIAEPAPYRDIQGLEHFDKV------IDIDQSPIGRTPRSNPATYTGVFTPVRELF 715 + A G D V + I+Q +S AT T V+ +R L+ Sbjct: 1075 SLNAYARSIVQPAGRPEVDAVYGIPPTVAIEQRLSRGGRKSTVATTTEVWHFLRLLY 1131 Score = 82.0 bits (201), Expect = 1e-13, Method: Composition-based stats. Identities = 40/125 (32%), Positives = 59/125 (47%), Gaps = 6/125 (4%) Query: 602 KKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQ 661 ++++ GAR +NLK++ L + G T +TG SGSGKS+L+ DTL+ QR+ Sbjct: 6 APPTSVKRTGLIRIRGARQHNLKNLDLDIRTGELTVVTGPSGSGKSSLVFDTLYAEGQRR 65 Query: 662 LNGATIAEPAPYRDIQGLEHFDKV------IDIDQSPIGRTPRSNPATYTGVFTPVRELF 715 A + D D V I IDQ+ RT RS T T + ++ LF Sbjct: 66 YVETFSAYARQFLDRMDRPAVDSVEGVPPAIAIDQTNPVRTSRSTVGTMTELNDHLKLLF 125 Query: 716 AGVPE 720 A + Sbjct: 126 ARAAQ 130 >UniRef50_A4BKX6 Excinuclease ABC, A subunit n=4 Tax=Proteobacteria RepID=A4BKX6_9GAMM Length = 1868 Score = 947 bits (2449), Expect = 0.0, Method: Composition-based stats. Identities = 387/985 (39%), Positives = 536/985 (54%), Gaps = 80/985 (8%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 63 I +RGAR +NL+N++L IP +L+V+TG+SGSGKSSLAFDT+YAEGQRRYVE+ S YARQ Sbjct: 10 ISIRGARQNNLRNLDLDIPLGELVVITGVSGSGKSSLAFDTVYAEGQRRYVETFSPYARQ 69 Query: 64 FLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCPDH 123 FL M+KP + I+G+ PAI+I+Q + + RSTVGT+TE++D+L+LLFAR C Sbjct: 70 FLDRMDKPAAERIDGIPPAIAIDQTNPVRSSRSTVGTMTELNDHLKLLFARAARLYCQRC 129 Query: 124 DVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARIDGEV 183 + T + + ++++ EG+R ++ + + L QGY R Sbjct: 130 GHRVVRDTADGIFEQLIARGEGQRAIITFAVEVPANFTPEEIRALLGRQGYTR------- 182 Query: 184 CDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVADMDDPKAE 243 L IEV DR ++ + R+ E+ E AL+ G V +D+ + Sbjct: 183 --------LHSTDNQRIEVSQDRLRLAANHRNRIVEALEAALKHGLGRTSVYPLDEHRQP 234 Query: 244 --ELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPELS 301 FS + C C + P FSFN+P GAC C G G D VI + LS Sbjct: 235 QAPWRFSTDLHCADCDLHYTDPHPSFFSFNSPIGACTVCRGFGRTLGIDYAAVIPDERLS 294 Query: 302 LAGGAIRGWDRRNFYYFQ-MLKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKENIEFKY 360 LA GAIR W Q L A H + PW +L+ + + VL G G Sbjct: 295 LAAGAIRPWRSGQSAECQRDLLRFARHRDLPTDTPWCNLTESDRRWVLDGEGDGA----- 349 Query: 361 MNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGTRLRREARH 420 + GV + ++ VR L+K+ S C++C G RL+ + Sbjct: 350 -----------DRWYGVRGYFDWLESKSYKMHVRVLLSKYRSYDLCSACHGARLKPQTLL 398 Query: 421 VYVE-------------------------------NTPLPAISDMSIGHAMEFFNNLKLA 449 + + + + + A+ FF L+L Sbjct: 399 WRLGRRKDADAVLDPAARFYPAGAALPRERLTKLPGLSIHDLMRLPLERAVHFFQLLQLP 458 Query: 450 GQRAKIAEKILKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVM 509 + AE +L+ I RL++L VGL YLTL R + TLSGGE QRI L + +G LV + Sbjct: 459 APMDEAAEVLLEGIRTRLRYLGEVGLGYLTLDRQSRTLSGGEVQRINLTTALGTSLVNTL 518 Query: 510 YVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGG 569 +VLDEPSIGLH RD +R++ + LRD GNT++VVEHD +RAAD ++D+GPG G GG Sbjct: 519 FVLDEPSIGLHPRDMQRIIEVMQRLRDAGNTLLVVEHDPQVMRAADRILDLGPGPGERGG 578 Query: 570 EVVAEGPLEAIMAVPESLTGQYMSGKRKIEVPK-KRVPANPEKVLKLTGARGNNLKDVTL 628 ++V GP ++ SLT Y+SG+R I + +R +P L++ GA +NLK++ + Sbjct: 579 DIVFCGPPAELLQARGSLTADYLSGRRTIGSAEIERPRGSPSLWLEIDGAAAHNLKNLDV 638 Query: 629 TLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDI 688 LP+ +TGVSGSGKSTL+ L+ R+L G P + + G E D+V+ + Sbjct: 639 RLPLQRLAVLTGVSGSGKSTLLQSVLYNAL-RKLQGRPAERPGQFTALHGHEQLDEVVLV 697 Query: 689 DQSPIGRTPRSNPATYTGVFTPVRELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGV 748 DQSPIG+T RSNPA+Y G FT +R+ FA P +R RGY PG FSFN GRC +C G+G Sbjct: 698 DQSPIGKTTRSNPASYVGAFTAIRKAFAAEPLARERGYQPGTFSFNSGSGRCPSCGGNGF 757 Query: 749 IKVEMHFLPDIYVPCDQCKGKRYNRETLEIKYK--------GKTIHEVLDMTIEEAREFF 800 VEM FL D+Y+ C C G+RY E LE+K K++ +VL MT+ +A FF Sbjct: 758 EHVEMQFLSDVYLRCPDCDGRRYRAEVLEVKLAPSADCRTTPKSVADVLAMTVTQASAFF 817 Query: 801 DAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLAREL---SKRGTGQT--LYI 855 P + L L VGL Y++LGQ TLSGGEAQR+KLA L ++R L++ Sbjct: 818 ADYPDIVAALTPLEAVGLGYLQLGQPVPTLSGGEAQRLKLAGHLTGAARRQAQHKRLLFL 877 Query: 856 LDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEI 915 DEPTTGLHF DI LL +L G++++VIEHNLDVI ADWI+DLGPEGG GGEI Sbjct: 878 FDEPTTGLHFEDIATLLHAFERLLQAGHSLLVIEHNLDVIAAADWIIDLGPEGGERGGEI 937 Query: 916 LVSGTPETVAECEASHTARFLKPML 940 + SG+P V ASHT + L L Sbjct: 938 VCSGSPAQVMAVAASHTGQALAAYL 962 Score = 780 bits (2015), Expect = 0.0, Method: Composition-based stats. Identities = 391/951 (41%), Positives = 546/951 (57%), Gaps = 108/951 (11%) Query: 2 DKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYA 61 + I + AR HNLKNI++ +PRD+L V+TG+SGSGKS+LAFD LY EGQRRY+ESL+AYA Sbjct: 991 ESIYIHHAREHNLKNIDVHVPRDRLTVITGISGSGKSTLAFDILYNEGQRRYLESLNAYA 1050 Query: 62 RQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCP 121 RQF+ +P+VD I G+ P ++IEQ+++ +STV T TE++ +LRLLF ++G CP Sbjct: 1051 RQFVQPAARPEVDAIFGIPPTVAIEQRTSRGGRKSTVATQTELYHFLRLLFVKLGVQHCP 1110 Query: 122 DHDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARIDG 181 D D+P+ AQTV +V +L G+ +LAP++ RKG +T+ + A +G+ + R+D Sbjct: 1111 DCDLPIEAQTVDAIVARLLRAHRGRPAHVLAPLVTARKGYYTELAKWAAGKGFTQLRVDR 1170 Query: 182 EVCDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVADMDDPK 241 + ++ P+L+ ++H I++ V + + RL + ALEL G V Sbjct: 1171 VLLPTANWPRLDRYREHDIDLPVAELMLEPENEARLRAQLQWALELGKGRVKV------- 1223 Query: 242 AEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPELS 301 + LFS ACP C G Q DP R LS Sbjct: 1224 -----------------DFGKPGEALFSIQR---ACPNC-GRSFQ-EADPRR------LS 1255 Query: 302 LAGGAIRGWDRRNFYYFQMLKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKENIEFKYM 361 + GW + +L + G Sbjct: 1256 FN--SKHGWCPSCYGVGVVLAGF--------------------DALQTGEE--------- 1284 Query: 362 NDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGTRLRREARHV 421 +E E+++ PC +C+G RL EA + Sbjct: 1285 -------------------VEWLVAESDAE-----------PHPCPACQGRRLCPEALAI 1314 Query: 422 YVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTLS 481 + + + +S+ A F++L+L G+ A IA +L E+ RL FL VGL+YLTL Sbjct: 1315 RFQGRNIADYTALSVEAAAHIFDSLELTGREAAIARDLLPELCHRLAFLKEVGLSYLTLD 1374 Query: 482 RSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTV 541 R+A TLSGGEAQRIRLA+Q+G+ L G YVLDEP+IGLH RDN LL +L LR GNT+ Sbjct: 1375 RAAPTLSGGEAQRIRLAAQLGSSLHGACYVLDEPTIGLHPRDNRMLLDSLRRLRAKGNTI 1434 Query: 542 IVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIE-V 600 +VVEHDE+ IR A+HVID+GP AG GG VVA G + +SLTG+ ++ + + Sbjct: 1435 VVVEHDEETIRCAEHVIDLGPAAGAAGGHVVATGTPLQLAQSADSLTGRLLAEPLRHPLL 1494 Query: 601 PKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQR 660 ++R P P++V++L GA +NL + ++LP+G ++GVSGSGKSTL+ L+ +R Sbjct: 1495 ARRRRPQTPDRVIRLVGANRHNLHGIDVSLPLGRLVGVSGVSGSGKSTLVRTVLYANLRR 1554 Query: 661 QLNGATIAEPAPYR---DIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAG 717 + AP R D+ G E D+V+++DQSPIG+TPRS PATY G + VR LFA Sbjct: 1555 LVAAKRSRSRAPLRDCKDLIGWESIDRVLEVDQSPIGKTPRSCPATYVGFWDDVRRLFAQ 1614 Query: 718 VPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLE 777 E+R RGY PGRFSFN + GRC AC+G G+ +V M FLPD+ + CD C G R+ ETL Sbjct: 1615 TEEARVRGYGPGRFSFNTKDGRCPACEGQGLQRVAMSFLPDVTLRCDLCNGLRFTPETLA 1674 Query: 778 IKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQR 837 ++Y+G++I VL +++ EA EFF + L+ L D GL Y+ LGQ + TLSGGEAQR Sbjct: 1675 VEYRGQSIGAVLQLSVAEAAEFFGVHRKIQHALRLLQDTGLGYLALGQPSPTLSGGEAQR 1734 Query: 838 VKLARELSKRGTG-------QTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEH 890 +KL EL+K G TLY+LDEPT GLH AD+++L+ VLH+L GNT+VVIEH Sbjct: 1735 LKLVTELAKARPGERRGRSPHTLYLLDEPTVGLHMADVEKLIRVLHRLVAAGNTVVVIEH 1794 Query: 891 NLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAE-CEASHTARFLKPML 940 NLD++ DW++DLGPEGG GGG I+ G PETVA+ E S+TAR L L Sbjct: 1795 NLDMLAEVDWLIDLGPEGGQGGGRIVAEGAPETVAQVSEGSYTARLLDEFL 1845 Score = 192 bits (487), Expect = 8e-47, Method: Composition-based stats. Identities = 102/339 (30%), Positives = 151/339 (44%), Gaps = 32/339 (9%) Query: 403 NRPCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKE 462 C C+G R R E V + + + S+ L + +A + Sbjct: 769 YLRCPDCDGRRYRAEVLEVKLAPSADCRTTPKSVADV------LAMTVTQASAFFADYPD 822 Query: 463 IGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQI--GAGLVGV----MYVLDEPS 516 I L L VGL YL L + TLSGGEAQR++LA + A +++ DEP+ Sbjct: 823 IVAALTPLEAVGLGYLQLGQPVPTLSGGEAQRLKLAGHLTGAARRQAQHKRLLFLFDEPT 882 Query: 517 IGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGP 576 GLH D LL L G++++V+EH+ D I AAD +ID+GP G GGE+V G Sbjct: 883 TGLHFEDIATLLHAFERLLQAGHSLLVIEHNLDVIAAADWIIDLGPEGGERGGEIVCSGS 942 Query: 577 LEAIMAVPESLTGQYMSGKRKIEVPKK--------------RVPANPEKVLKLTGARGNN 622 +MAV S TGQ ++ K K + + + + AR +N Sbjct: 943 PAQVMAVAASHTGQALAAYLKARATKPLSSNSATAEPGAAVPAAQHGAESIYIHHAREHN 1002 Query: 623 LKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAEPAPYRDIQGLEHF 682 LK++ + +P T ITG+SGSGKSTL D L+ QR+ + A + Sbjct: 1003 LKNIDVHVPRDRLTVITGISGSGKSTLAFDILYNEGQRRYLESLNAYARQFVQPAARPEV 1062 Query: 683 DKV------IDIDQSPIGRTPRSNPATYTGVFTPVRELF 715 D + + I+Q +S AT T ++ +R LF Sbjct: 1063 DAIFGIPPTVAIEQRTSRGGRKSTVATQTELYHFLRLLF 1101 Score = 79.6 bits (195), Expect = 5e-13, Method: Composition-based stats. Identities = 37/114 (32%), Positives = 59/114 (51%), Gaps = 6/114 (5%) Query: 610 EKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAE 669 ++ + + GAR NNL+++ L +P+G ITGVSGSGKS+L DT++ QR+ Sbjct: 7 KRCISIRGARQNNLRNLDLDIPLGELVVITGVSGSGKSSLAFDTVYAEGQRRYVETFSPY 66 Query: 670 PAPYRDIQGLEHFDKV------IDIDQSPIGRTPRSNPATYTGVFTPVRELFAG 717 + D +++ I IDQ+ R+ RS T T + ++ LFA Sbjct: 67 ARQFLDRMDKPAAERIDGIPPAIAIDQTNPVRSSRSTVGTMTELNDHLKLLFAR 120 >UniRef50_Q21RT9 UvrA family protein n=4 Tax=Bacteria RepID=Q21RT9_RHOFD Length = 2098 Score = 942 bits (2434), Expect = 0.0, Method: Composition-based stats. Identities = 380/1047 (36%), Positives = 540/1047 (51%), Gaps = 125/1047 (11%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 63 I +RGAR HNLKN++L I +L VVTG SGSGKSSL FDTL+AEGQRRYVE+ SAYARQ Sbjct: 6 IRIRGARQHNLKNLDLDIRTGELTVVTGPSGSGKSSLVFDTLFAEGQRRYVETFSAYARQ 65 Query: 64 FLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCPDH 123 FL M+KP VD +EG+ PAI+I+Q + + RSTVGT+TE++D+L+LLFAR G Sbjct: 66 FLDRMDKPAVDKVEGVPPAIAIDQTNPVRSSRSTVGTMTELNDHLKLLFARAGALFDRVT 125 Query: 124 DVPLAAQTVSQMVDNVLSQPE--GKRLMLLAPIIKERKGEHTKTLENLASQGYIRARIDG 181 P+ + + +L + RL + P+ + + L+ G+ + + + Sbjct: 126 AQPVRHDSPETIYAQLLERSAQANTRLAITFPVELPASATPEEVAQWLSVSGFTKVQAER 185 Query: 182 EV----------CDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGT 231 ++ ++ ++VV DRF++ R+ E+ E AL+ G Sbjct: 186 DLEVEASPAVGHKKPGKAAPEPASRRKVLDVVADRFRLAHAERARVLEAIEVALKHGSGR 245 Query: 232 AVVADMDDPKA-----------------EELLFSANFACPICGYSMRELEPRLFSFNNPA 274 V +++P+A E FS CP + +FSFN+ Sbjct: 246 INVYVLNEPQAPDIQGSLATDSIVNSVPEIWRFSTGLHCPESNLRYTDPIASMFSFNSAV 305 Query: 275 GACPTCDGLGVQQYFDPDRVIQNPELSLAGGAIRGWDRRNFYYFQM-LKSLADHYKFDVE 333 GAC C G G D VI N +L+L GAI+ + Q L A+ + Sbjct: 306 GACDACRGFGRVIGVDYGLVIPNDKLTLRAGAIKPMQTPAWQEAQDDLMRHAEGAGIPRD 365 Query: 334 APWGSLSANVHKVVLYGSGKENIEFKYMNDRGDTSIRRHPFEGVLHNMERRYKETESSAV 393 PW L+ V+ GS N ++ + G+ E ++ + Sbjct: 366 TPWYKLTPEQQHWVIDGSPNWNGKW------------NQHWFGIRRFFEYLETKSYKMHI 413 Query: 394 REELAKFISNRPCASCEGTRLRREARHVYVE----------------------------- 424 R L+K+ S PC +C G RL+ E+ + Sbjct: 414 RVLLSKYRSYTPCPTCGGARLKTESLLWRMGSKADADKVLDPAKRFMPAGVKWSREQLEA 473 Query: 425 --NTPLPAISDMSIGHAMEFFNNLK------------------------LAGQRAKIAEK 458 L + + + FF++++ + AK + Sbjct: 474 LPGLCLHDLMLLPLDRVRRFFDSMQARLGVSERAAPETAGEPGLSVAVVTSEADAKTLKL 533 Query: 459 ILKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIG 518 + +EI RLK+L VG+ YLTL R + TLSGGE QRI L + +G LV ++VLDEPSIG Sbjct: 534 LFEEISTRLKYLCEVGIGYLTLDRQSRTLSGGEVQRINLTTALGTSLVNTLFVLDEPSIG 593 Query: 519 LHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLE 578 LH RD R++ + LRD GNT++VVEHD + AAD +ID+GPG G GG++V +G Sbjct: 594 LHPRDMHRIIVAMQRLRDAGNTLVVVEHDPAVMLAADRMIDMGPGPGERGGQIVFDGSTA 653 Query: 579 AIMAVPESLTGQYMSGKRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCI 638 + ++LTG Y+ G++++ + +R+ A L L GAR +NLK+V + P+ CI Sbjct: 654 D-LRHADTLTGAYLGGRKQVGLGFQRLVAANTPRLILEGAREHNLKNVGVEFPLQRLVCI 712 Query: 639 TGVSGSGKSTLINDTLFPIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPR 698 TGVSGSGKSTLI D L P +R G P + + G E V+ +DQSPIG+T R Sbjct: 713 TGVSGSGKSTLIQDILAPALKRHF-GKPSEAPGAFERLLGAEQLSDVVFVDQSPIGKTAR 771 Query: 699 SNPATYTGVFTPVRELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPD 758 SNP +Y G + +RE+FA P SR RGYT +FSFN GRC C G G VEM FL D Sbjct: 772 SNPVSYVGAWDAIREIFANAPLSRQRGYTASKFSFNNGDGRCATCGGSGFEHVEMQFLSD 831 Query: 759 IYVPCDQCKGKRYNRETLEIK---------------YKGKTIHEVLDMTIEEAREFFDAV 803 +Y+ C C GKRY E LEI + + +VL++T+ EA F+ Sbjct: 832 VYLRCPDCDGKRYRPEILEITIERPLRIKSAGPAPSVRHINVADVLNLTVSEAAMLFEHD 891 Query: 804 PALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKR-----------GTGQT 852 + R LQ ++DVGL Y++LGQ TLSGGEAQR+KLA L+ T Sbjct: 892 REVIRGLQPIIDVGLEYVKLGQPVPTLSGGEAQRLKLAGFLADAAKSASASRQAIARRGT 951 Query: 853 LYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADWIVDLGPEGGSGG 912 L++ DEPTTGLHF DI +L+ L KL D G++++VIEHNLDVI+ +DW++DLGPEGG G Sbjct: 952 LFMFDEPTTGLHFDDIAKLMRALRKLLDVGHSLIVIEHNLDVIRASDWLIDLGPEGGDAG 1011 Query: 913 GEILVSGTPETVAECEASHTARFLKPM 939 GE++ GTP+ V + ASHT + L+ Sbjct: 1012 GEVVAFGTPDDVRQHPASHTGKALRDY 1038 Score = 424 bits (1089), Expect = e-116, Method: Composition-based stats. Identities = 219/675 (32%), Positives = 315/675 (46%), Gaps = 110/675 (16%) Query: 2 DKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYA 61 + I++ AR HNLK++++ IPR K VVTG+SGSGKS+LAFD L+ EGQRRY+ESL+AYA Sbjct: 1093 NAIQIINAREHNLKSLSVNIPRGKFTVVTGVSGSGKSTLAFDILFNEGQRRYLESLNAYA 1152 Query: 62 RQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCP 121 R + +P+VD + G+ P ++IEQ+ + +STVGT TE+ +LRLLF ++G C Sbjct: 1153 RSIVQPAGRPEVDAVYGIPPTVAIEQRLSRGGRKSTVGTTTEVWHFLRLLFVKLGTQHCI 1212 Query: 122 DHDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARIDG 181 P+A QT + ++ G+ + LL+P++ RKG +T+ + +G+ R+DG Sbjct: 1213 HDGTPVAPQTPDSIAAQLMKNFRGQHIGLLSPLVMNRKGVYTELADWARPRGFTHLRVDG 1272 Query: 182 EVCDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVADMDDPK 241 + P+++ K+HTIE+ V V + L + AL G V Sbjct: 1273 NFLPTTAFPRIDRFKEHTIELPVASLDVLPEQEAALRAALAQALMHGKGVVHVLSNLSGL 1332 Query: 242 AEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPELS 301 +L P + FS ACP C DP Sbjct: 1333 RAAML----AGTPTAQIG----TLQAFS---TLRACPVCSTS--YAELDPRL-------- 1371 Query: 302 LAGGAIRGWDRRNFYYFQMLKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKENIEFKYM 361 + + GW L+ KV ++ Sbjct: 1372 FSYNSKHGWCPD-----------CVGTGVR-------LTKEQRKVF----DDSVVD---- 1405 Query: 362 NDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGTRLRREARHV 421 D R F +E + C +C+GTRL AR V Sbjct: 1406 ---NDNKGREQTF--AEPEVEDLV-----------------DAVCPACQGTRLNATARAV 1443 Query: 422 Y------------------VENTPLPAISDMSIGHAMEFFNNL----KLAGQRAKIAEKI 459 +E + ++ +S+ ++ L +++ + IA + Sbjct: 1444 KFGLQLASPATASIRARQAIEGVAITELARLSVTDLRQWVETLQTQGRMSQRETDIARDL 1503 Query: 460 LKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGL 519 + EI RL+FL VGL YLTL R A TLSGGEAQRIRLA+Q+G+ L GV YVLDEP+IGL Sbjct: 1504 VPEIKGRLEFLEQVGLGYLTLDRGAPTLSGGEAQRIRLAAQLGSNLQGVCYVLDEPTIGL 1563 Query: 520 HQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEA 579 H RDN+ LLG L L D GNT++VVEHDED IR ADH+IDIGP AG GG++VAEG + Sbjct: 1564 HPRDNQILLGALQSLSDQGNTLVVVEHDEDTIRYADHIIDIGPSAGKRGGQLVAEGSVAD 1623 Query: 580 IMAVPESLTGQYMSGKRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCIT 639 I ES TG+Y+ K + +R L DV + + G + Sbjct: 1624 IQGAAESQTGRYLLHAMKHPLKPRRPVLM--------------LADVGVGIGTGAVLAAS 1669 Query: 640 -----GVSGSGKSTL 649 G S +G ++L Sbjct: 1670 RAGSPGASDAGSTSL 1684 Score = 356 bits (915), Expect = 2e-96, Method: Composition-based stats. Identities = 160/355 (45%), Positives = 220/355 (61%), Gaps = 22/355 (6%) Query: 607 ANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGAT 666 ++ L +T A +NL+ VT +P+ ITGVSGSGKSTL D L + + Sbjct: 1743 PEVQRWLTVTNATMHNLQHVTAQVPLSRLVAITGVSGSGKSTLARDVLLANVHTAVQKRS 1802 Query: 667 IAEPAP------------YRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVREL 714 + G E D+V+++DQ+PIG+TPRS PATY G + +R+L Sbjct: 1803 TKAGRDALDAGEQISWTGCTSVTGFESVDRVLEVDQTPIGKTPRSCPATYIGFWDIIRKL 1862 Query: 715 FAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRE 774 FA E++ARGY RFSFN GRC C+G G+ + M FLPD+ V C+ CKG R+N E Sbjct: 1863 FADTLEAKARGYAANRFSFNTGEGRCAGCEGQGIRTIAMSFLPDVKVLCETCKGARFNPE 1922 Query: 775 TLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGE 834 TL + ++GK I +VL M ++EA +FF A+P ++ LQ L DVGL Y+ LGQ + TLSGGE Sbjct: 1923 TLAVTWRGKNIGDVLQMEVDEAVQFFAAMPNISHPLQLLKDVGLGYLTLGQPSPTLSGGE 1982 Query: 835 AQRVKLARELSK---------RGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTI 885 AQR+KL ELSK + TLY+LDEPT GLH AD+++L+ VLH+L D G+++ Sbjct: 1983 AQRLKLVTELSKVRDDITRRGQKAPHTLYVLDEPTVGLHMADVEKLIKVLHRLVDGGHSV 2042 Query: 886 VVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLKPML 940 VVIEH+LDVI ADW++DLGP+GG+ GG ++ + TPE V + T L +L Sbjct: 2043 VVIEHDLDVIAEADWVIDLGPDGGNAGGRVVAATTPEGVVTL-GTPTGVALAAVL 2096 Score = 205 bits (521), Expect = 8e-51, Method: Composition-based stats. Identities = 104/371 (28%), Positives = 159/371 (42%), Gaps = 58/371 (15%) Query: 403 NRPCASCEGTRLRREARHVYV-ENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILK 461 C C+G R R E + + + + + + L L A + + + Sbjct: 833 YLRCPDCDGKRYRPEILEITIERPLRIKSAGPAPSVRHINVADVLNLTVSEAAMLFEHDR 892 Query: 462 EIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGL------------VGVM 509 E+ L+ +++VGL Y+ L + TLSGGEAQR++LA + G + Sbjct: 893 EVIRGLQPIIDVGLEYVKLGQPVPTLSGGEAQRLKLAGFLADAAKSASASRQAIARRGTL 952 Query: 510 YVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGG 569 ++ DEP+ GLH D +L+ L L D+G+++IV+EH+ D IRA+D +ID+GP G GG Sbjct: 953 FMFDEPTTGLHFDDIAKLMRALRKLLDVGHSLIVIEHNLDVIRASDWLIDLGPEGGDAGG 1012 Query: 570 EVVAEGPLEAIMAVPESLTGQYMSG----------------------------------- 594 EVVA G + + P S TG+ + Sbjct: 1013 EVVAFGTPDDVRQHPASHTGKALRDYATAMGGVHGVNEFTAPYLVHATAAGVTPGASDAG 1072 Query: 595 ----KRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLI 650 E +++ AR +NLK +++ +P G FT +TGVSGSGKSTL Sbjct: 1073 STSLPGATPAAADHGVHAAENAIQIINAREHNLKSLSVNIPRGKFTVVTGVSGSGKSTLA 1132 Query: 651 NDTLFPIAQRQLNGATIAEPAPYRDIQGLEHFDKV------IDIDQSPIGRTPRSNPATY 704 D LF QR+ + A G D V + I+Q +S T Sbjct: 1133 FDILFNEGQRRYLESLNAYARSIVQPAGRPEVDAVYGIPPTVAIEQRLSRGGRKSTVGTT 1192 Query: 705 TGVFTPVRELF 715 T V+ +R LF Sbjct: 1193 TEVWHFLRLLF 1203 Score = 173 bits (439), Expect = 2e-41, Method: Composition-based stats. Identities = 90/298 (30%), Positives = 126/298 (42%), Gaps = 62/298 (20%) Query: 700 NPATYTGVFTPVRELFAGVPESR-ARGYTPGRFSFNVRGGRCEACQGDGVIKV------- 751 P G L A S P FS+N + G C C G GV Sbjct: 1340 TPTAQIGTLQAFSTLRACPVCSTSYAELDPRLFSYNSKHGWCPDCVGTGVRLTKEQRKVF 1399 Query: 752 ------------EMHFLPD-----IYVPCDQCKGKRYNRETLEIKY-------------- 780 E F + C C+G R N +K+ Sbjct: 1400 DDSVVDNDNKGREQTFAEPEVEDLVDAVCPACQGTRLNATARAVKFGLQLASPATASIRA 1459 Query: 781 ----KGKTIHEVLDMTIEEAREFFDA------------------VPALARKLQTLMDVGL 818 +G I E+ +++ + R++ + VP + +L+ L VGL Sbjct: 1460 RQAIEGVAITELARLSVTDLRQWVETLQTQGRMSQRETDIARDLVPEIKGRLEFLEQVGL 1519 Query: 819 TYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKL 878 Y+ L + A TLSGGEAQR++LA +L G Y+LDEPT GLH D Q LL L L Sbjct: 1520 GYLTLDRGAPTLSGGEAQRIRLAAQLGSNLQG-VCYVLDEPTIGLHPRDNQILLGALQSL 1578 Query: 879 RDQGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFL 936 DQGNT+VV+EH+ D I+ AD I+D+GP G GG+++ G+ + S T R+L Sbjct: 1579 SDQGNTLVVVEHDEDTIRYADHIIDIGPSAGKRGGQLVAEGSVADIQGAAESQTGRYL 1636 Score = 164 bits (414), Expect = 2e-38, Method: Composition-based stats. Identities = 73/218 (33%), Positives = 108/218 (49%), Gaps = 27/218 (12%) Query: 389 ESSAVREELAKFI--SNRPCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNL 446 E +R F+ C +C+G R E V + + M + A++FF + Sbjct: 1892 EGQGIRTIAMSFLPDVKVLCETCKGARFNPETLAVTWRGKNIGDVLQMEVDEAVQFFAAM 1951 Query: 447 KLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQI----- 501 I L+ L +VGL YLTL + + TLSGGEAQR++L +++ Sbjct: 1952 P--------------NISHPLQLLKDVGLGYLTLGQPSPTLSGGEAQRLKLVTELSKVRD 1997 Query: 502 -----GAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADH 556 G +YVLDEP++GLH D E+L+ L L D G++V+V+EHD D I AD Sbjct: 1998 DITRRGQKAPHTLYVLDEPTVGLHMADVEKLIKVLHRLVDGGHSVVVIEHDLDVIAEADW 2057 Query: 557 VIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSG 594 VID+GP G GG VVA E ++ + + TG ++ Sbjct: 2058 VIDLGPDGGNAGGRVVAATTPEGVVTL-GTPTGVALAA 2094 Score = 79.3 bits (194), Expect = 7e-13, Method: Composition-based stats. Identities = 42/171 (24%), Positives = 63/171 (36%), Gaps = 26/171 (15%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 63 + V A HNL+++ +P +L+ +TG+SGSGKS+LA D L A + + R Sbjct: 1749 LTVTNATMHNLQHVTAQVPLSRLVAITGVSGSGKSTLARDVLLANVHTAVQKRSTKAGRD 1808 Query: 64 FLSLMEKP------DVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFA---- 113 L E+ V E + + ++Q PRS T D +R LFA Sbjct: 1809 ALDAGEQISWTGCTSVTGFESVDRVLEVDQTPIGKTPRSCPATYIGFWDIIRKLFADTLE 1868 Query: 114 -------------RVGEPRCPDHDVPLAAQTVSQM---VDNVLSQPEGKRL 148 GE RC + V + +G R Sbjct: 1869 AKARGYAANRFSFNTGEGRCAGCEGQGIRTIAMSFLPDVKVLCETCKGARF 1919 >UniRef50_C0ABC8 Excinuclease ABC, A subunit n=1 Tax=Opitutaceae bacterium TAV2 RepID=C0ABC8_9BACT Length = 1013 Score = 936 bits (2419), Expect = 0.0, Method: Composition-based stats. Identities = 451/1002 (45%), Positives = 604/1002 (60%), Gaps = 70/1002 (6%) Query: 3 KIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYAR 62 I ++GAR HNLKN+ L IPR +L+V+TG SGSGKSSLAFDTLYAEG R+Y+ESLS AR Sbjct: 7 HIHIKGAREHNLKNLELRIPRGRLVVITGPSGSGKSSLAFDTLYAEGYRKYMESLSTQAR 66 Query: 63 QFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCPD 122 Q L +++PDVD I GLSP ++IEQ++ +PRST+ T+TEI DY RLL+A GE RCP Sbjct: 67 QVLEQLKRPDVDFIHGLSPVLAIEQRTGGGSPRSTIATVTEIADYARLLWALHGEQRCPK 126 Query: 123 HDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARIDGE 182 + +++ V +L G+R+MLLAP IK R + L L +G++R RIDGE Sbjct: 127 DGGRVVQRSLDDNVARILRDVPGQRIMLLAPAIKARPSVLREELPRLRQRGFLRVRIDGE 186 Query: 183 VCDLSDPPKLEL-QKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVADMDDPK 241 + L DP + ++ ++++VDR +D RLA+S E A ++ + Sbjct: 187 IKTLDDPRLIPTGTRELEVDLIVDRLVASEDQRSRLADSLELAFREGRDRVILLAQSNAA 246 Query: 242 --AEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPE 299 E S + AC +CG +L PR FSFN+ GACPTC G+G + F P+ ++ +PE Sbjct: 247 DPWTEHHLSQSLACEVCGDVFEKLTPRHFSFNHSEGACPTCGGIGRKLRFVPEFIVPDPE 306 Query: 300 LSLAGGAIRGWDRRNF----YYFQMLKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKEN 355 S+ GGAI+ W + +LK LA+ +D E PW L + +L+G+G+ Sbjct: 307 KSVRGGAIKPWRIGGKNLIIKHNALLKQLAEQLPYDPETPWKDLPESTRNTILHGAGERL 366 Query: 356 IEFKYMNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKF--------------- 400 FK R R PF GV+ ++E ++ET+S R L + Sbjct: 367 FAFKLKRMREP---RAMPFAGVIADLEESFRETDSDGFRARLMTYMISDECPECHGVRLN 423 Query: 401 ---------ISNRPCASCEGTR--------------------LRREARHVYVENTP---- 427 ++RP S G ++ AR P Sbjct: 424 ARSSAVTVARASRPHPSPSGAGETPAPRVGASLAKPAYAEDGIKWRARASQATPLPAGET 483 Query: 428 ---------LPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNVGLNYL 478 + + + A L + +I+ I RL+FL+ GL YL Sbjct: 484 PAPLPPPLAITDFFRLDVAAAHALATELSATLSANEALREIVTGIEHRLRFLLETGLGYL 543 Query: 479 TLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLG 538 TL R +TLSGGEAQR+RLA+Q+G GL+GV+YVLDEPSIGLH DN +LL TL LRD G Sbjct: 544 TLDRDYDTLSGGEAQRVRLATQLGMGLMGVIYVLDEPSIGLHPHDNRKLLDTLRELRDRG 603 Query: 539 NTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVP--ESLTGQYMSGKR 596 NTV+VVEHDED +R AD +I++GP AG GG ++ +G A+ A P ++ TG Y++ K Sbjct: 604 NTVVVVEHDEDTMRIADEIIELGPEAGTEGGRILFQGTPAALSAAPARQTRTGPYLARKI 663 Query: 597 KIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFP 656 I L + AR NNL+ + P GL TC+TGVSGSGKSTL+ND L Sbjct: 664 SITN-DAGNKPPDGAFLTVREARANNLRGIDARFPAGLLTCVTGVSGSGKSTLVNDILAA 722 Query: 657 IAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFA 716 A R+LNGAT PAP+R I+ L+ F+K++ +DQSPIGR+PRSNPATYTG+ +R+LFA Sbjct: 723 AAARKLNGATKIHPAPHRAIEHLDFFEKLVQVDQSPIGRSPRSNPATYTGLLDLLRDLFA 782 Query: 717 GVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETL 776 VP ++ RGY RFSFNVRGGRCE CQGDGVIK++M F+ D Y PC C+G+R+NRETL Sbjct: 783 QVPLAKVRGYKASRFSFNVRGGRCERCQGDGVIKLDMQFMADAYAPCPSCEGRRFNRETL 842 Query: 777 EIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQ 836 EI + G++I +VL MT+ +A + F +P + KL TL VGL Y+ LGQSATTLSGGEAQ Sbjct: 843 EILFHGQSIADVLAMTVRDAIDLFRNIPRVMDKLATLDAVGLGYLTLGQSATTLSGGEAQ 902 Query: 837 RVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIK 896 R+KL+ ELSKR G TLYILDEPTTGLH+ DIQ L+D+L KLRD GNT++VIEHNLDVI Sbjct: 903 RLKLSLELSKRQQGATLYILDEPTTGLHWVDIQHLMDLLFKLRDAGNTLIVIEHNLDVIN 962 Query: 897 TADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLKP 938 ADW++DLGP GGS GGE++ +G + + S T + LK Sbjct: 963 IADWLIDLGPGGGSAGGELIYAGPRPGIEQEPRSLTGQALKR 1004 Score = 78.5 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 64/264 (24%), Positives = 98/264 (37%), Gaps = 37/264 (14%) Query: 606 PANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGA 665 + + GAR +NLK++ L +P G ITG SGSGKS+L DTL+ R+ + Sbjct: 1 MQQAATHIHIKGAREHNLKNLELRIPRGRLVVITGPSGSGKSSLAFDTLYAEGYRKYMES 60 Query: 666 TIAEPAPYRDIQGLEHFD------KVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVP 719 + + D V+ I+Q G +PRS AT T + R L+A Sbjct: 61 LSTQARQVLEQLKRPDVDFIHGLSPVLAIEQRTGGGSPRSTIATVTEIADYARLLWALHG 120 Query: 720 ESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIK 779 E R C DG V+ ++ G+R IK Sbjct: 121 EQR--------------------CPKDGGRVVQRSLDDNVARILRDVPGQRIMLLAPAIK 160 Query: 780 YKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMD-----VGLTYIRLGQSATTLSGGE 834 + VL + R+ + +++TL D G + + L E Sbjct: 161 ARPS----VLREELPRLRQRGFLRVRIDGEIKTLDDPRLIPTGTRELEVDLIVDRLVASE 216 Query: 835 AQRVKLA--RELSKRGTGQTLYIL 856 QR +LA EL+ R + +L Sbjct: 217 DQRSRLADSLELAFREGRDRVILL 240 >UniRef50_C7I293 Excinuclease ABC, A subunit n=1 Tax=Thiomonas intermedia K12 RepID=C7I293_THIIN Length = 1979 Score = 935 bits (2416), Expect = 0.0, Method: Composition-based stats. Identities = 387/999 (38%), Positives = 543/999 (54%), Gaps = 89/999 (8%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 63 I + GAR +NLKN++L IP +++VVTG+SGSGKSSL FDT+YAEGQRRYVE+ S YARQ Sbjct: 19 IRIIGARQNNLKNLDLDIPLGRIVVVTGVSGSGKSSLVFDTVYAEGQRRYVETFSPYARQ 78 Query: 64 FLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCPDH 123 FL M++P VD IEG+ PAI+I+Q + RSTVGT+TE+ D+L+LLFAR C Sbjct: 79 FLDRMDRPQVDRIEGIPPAIAIDQTNPVRTSRSTVGTMTELADHLKLLFARAARLYCRGC 138 Query: 124 DVPLAAQTVSQMVDNVLS----QPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARI 179 + T +V++V P+G R ++ + + + LA+QGY R Sbjct: 139 GAEVRRDTAQSIVEDVQRRARLLPQGLRAAVVFAVAMPQGMSVEHITQQLAAQGYTRILG 198 Query: 180 DGEVCDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVADMD- 238 + + K ++VV DR ++ D RL+E+ E AL L G V ++ Sbjct: 199 ER-----------DTPKGRVLDVVQDRLRLPTDEPARLSEAVEAALRLGQGRMEVHELPR 247 Query: 239 -----DPKAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDR 293 + K +S++ C C R+ P LFSFN+P GAC TC G G D D Sbjct: 248 DAEAAESKGMVWRYSSDLHCADCDIHYRDPSPGLFSFNSPVGACETCRGFGRVIGVDLDL 307 Query: 294 VIQNPELSLAGGAIRGWDRRNFYYFQ-MLKSLADHYKFDVEAPWGSLSANVHKVVLYGSG 352 VI + +L GA++ W ++F Q L+ A + ++ PW LS + V+ G Sbjct: 308 VIPDVRKTLRAGAVKPWQTQSFAECQTDLERYAAQAEIRLDVPWAELSESERTWVIEGDP 367 Query: 353 KENIEFKYMNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGT 412 ++ F GV + VR L+K+ S C +C+G Sbjct: 368 DWRGNWQKQ------------FYGVRRYFDWLESRAYKMHVRVLLSKYRSYTACPTCQGA 415 Query: 413 RLRREARHVYVE--------------------------------NTPLPAISDMSIGHAM 440 RL+ EA + L ++ + I Sbjct: 416 RLKTEALLWRIGSKFQADTALQGGYRRFRPVGAQWSDAVLGGLPGLNLHDVNSLPIERLQ 475 Query: 441 EFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQ 500 F +L L + +L I RL++L +VGL YLTL R + TLSGGE QRI L + Sbjct: 476 RLFADLALPDMAQAASSMLLDNIRSRLRYLRDVGLGYLTLDRQSRTLSGGEVQRINLTTA 535 Query: 501 IGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDI 560 +G L ++VLDEPSIGLH RD +RL G L L++ GN++++VEHD +R AD +++I Sbjct: 536 LGTALTQTLFVLDEPSIGLHPRDLDRLGGVLHRLKEAGNSLLLVEHDPQLMRTADWMLEI 595 Query: 561 GPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKI--EVPKKRVPANP------EKV 612 GPG G GG +V +G L+ +LTG+Y+SG+ ++ +P++R P Sbjct: 596 GPGPGERGGHLVFQGTLDQ-AQRSNTLTGRYLSGELQVSDALPRRRTPRRDAQGGLLAPR 654 Query: 613 LKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAEPAP 672 L L GAR +NLK +T+ +P+G T +TGVSG GKSTL+ D L+P R L G T P Sbjct: 655 LILEGAREHNLKSLTVEIPLGFMTALTGVSGCGKSTLVGDVLYPALARAL-GKTAPVPGA 713 Query: 673 YRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESRARGYTPGRFS 732 + + G + V+ +DQSPIG+T RSNP ++ G F +R LFA +P +R RGYT G FS Sbjct: 714 FDRLLGADQVGDVVLVDQSPIGKTARSNPVSFVGAFDGIRALFAALPAARERGYTAGTFS 773 Query: 733 FNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKYK------GKTIH 786 FN GRC C G G VEM FL D+Y+ C C GKRY E LE++ + Sbjct: 774 FNSGEGRCPTCGGSGFEHVEMQFLSDVYLRCPDCDGKRYRAEVLEVQLPAQAGFAPLNMA 833 Query: 787 EVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSK 846 +VLD+T+ EA + F + R LQ L+DVGL Y+RLGQ TLSGGEAQR+KLA L+ Sbjct: 834 QVLDLTVAEALQRFRGQADITRTLQALVDVGLDYLRLGQPTPTLSGGEAQRLKLAGFLAD 893 Query: 847 RGTGQ-------TLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTAD 899 + TL++ DEPTTGLHF D+ +LL L KL D G+T++VIEHNLDVI ++D Sbjct: 894 AAKTRAGLARKGTLFLFDEPTTGLHFDDVAKLLRALRKLLDAGHTVLVIEHNLDVIASSD 953 Query: 900 WIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLKP 938 W++DLGPEGG GG ++ +G P+ +A C S T + L Sbjct: 954 WVIDLGPEGGDAGGRLVFAGPPDELAACATSFTGQALAR 992 Score = 782 bits (2020), Expect = 0.0, Method: Composition-based stats. Identities = 373/936 (39%), Positives = 528/936 (56%), Gaps = 65/936 (6%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 63 I +R AR HNL+ +++ IPR ++ V+TG+SGSGKS+LAFD L+ EGQRRY+ES++AYARQ Sbjct: 1089 IAIRQAREHNLRGVDVDIPRGEMTVITGVSGSGKSTLAFDVLFTEGQRRYLESINAYARQ 1148 Query: 64 FLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCPDH 123 F+ +PDV+ I G+ P ++IEQ+++ +STVGT+TE + +LRL++A+ G CPD Sbjct: 1149 FVQPAARPDVEAIVGIPPTVAIEQRTSRGGRKSTVGTLTEAYHFLRLIYAKCGTQYCPDC 1208 Query: 124 DVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARIDGEV 183 ++P+ Q+ + +L G+ + LLAP++ +RKG +T S GY R+DG Sbjct: 1209 NIPIEPQSPEAIAAQLLRDWRGQHIGLLAPLVVQRKGYYTDLAVWARSMGYTHLRVDGAF 1268 Query: 184 CDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVADMDDPKAE 243 P+L+ K+H+IE+ V VR D + L + AL L G +V D E Sbjct: 1269 VPTDPWPRLDRFKEHSIELPVGDVVVRADNEEALRDLLRRALALGKGVVLVLAPLDGLKE 1328 Query: 244 ELLFSANFACPICGYSMRELEPRLFSFN-NPAGACPTCDGLGVQQYFDPDRVIQNPELSL 302 + + EP + S + ACP C G + DP + Sbjct: 1329 AM-------------EAGQPEPPMRSLLLSTKRACPGC-GRSF-RELDPRQ--------F 1365 Query: 303 AGGAIRGWDRRNFYYFQMLKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKENIEFKYMN 362 + + GW F +++ FD E +G+E + Sbjct: 1366 SYNSPTGWCPTCFGTGELI------AGFDAEQ----------------TGEEAAWVEADG 1403 Query: 363 DRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGTRLRREARHVY 422 ++ + E T C SC G RL R++ V Sbjct: 1404 EKATPRGKPGRDRKAAPVAEPGAPST-----------------CPSCHGARLNRDSLAVR 1446 Query: 423 VENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTLSR 482 + + + ++ I A +F L L + A+I L EI RL F+ VGL YL L R Sbjct: 1447 LRDQSIAQLAARDIDAAAAWFGALALTPREAEIVRDALSEIRSRLAFMQQVGLGYLGLDR 1506 Query: 483 SAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVI 542 A TLSGGEAQRIRLA+Q+G+ L GV YVLDEP+IGLH RDN LL L L+ GNT++ Sbjct: 1507 GAPTLSGGEAQRIRLAAQLGSNLRGVCYVLDEPTIGLHPRDNRILLDALALLKAKGNTLV 1566 Query: 543 VVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEVPK 602 VVEHDED +R ADH+IDIGPGAG GG+VVA G L +MA ++ T + + + Sbjct: 1567 VVEHDEDTMRRADHLIDIGPGAGRRGGQVVASGALAEVMAHADTATARSLRDPMPWPLQP 1626 Query: 603 KRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQL 662 + + + L L A +NL+ ++ P G T +TGVSGSGKSTL + L P ++L Sbjct: 1627 RPLTRADQPALHLHSAHLHNLQGLSAQFPRGRLTVVTGVSGSGKSTLAREVLVPALHQRL 1686 Query: 663 NGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESR 722 G + G E ++V+++DQ+PIG+TPRS ATY G++ +R+LFA E+R Sbjct: 1687 AGHAGEIDGAGD-LTGWEGLERVLEVDQAPIGKTPRSCAATYLGLWDGIRQLFADTEEAR 1745 Query: 723 ARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKYKG 782 RGYT RFSFN GRC C+G G +KV M+FLPD+ VPC C G R+N ETL ++ +G Sbjct: 1746 IRGYTASRFSFNTGPGRCPTCEGQGAVKVAMNFLPDVTVPCTDCNGLRFNPETLAVRLRG 1805 Query: 783 KTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLAR 842 + EVL M ++EA EFF A + LQ L DVGL Y++LGQ + LSGGEAQR+KL Sbjct: 1806 RNAGEVLQMEVDEAVEFFAAHRKIHHALQLLQDVGLGYLQLGQPSPFLSGGEAQRIKLVT 1865 Query: 843 ELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADWIV 902 EL+ GT T+Y+LDEPT GLH D ++L+ VLH+L D G+T+VVIEH+LD++ ADW++ Sbjct: 1866 ELATAGTRPTVYVLDEPTVGLHKTDTEKLIRVLHRLTDSGHTVVVIEHDLDMMANADWLI 1925 Query: 903 DLGPEGGSGGGEILVSGTPETVAECEAS-HTARFLK 937 DLGPEGG GGG +++ G E +A HTA+ L+ Sbjct: 1926 DLGPEGGKGGGRLVMQGPTADFLEADAPGHTAKALR 1961 Score = 157 bits (397), Expect = 2e-36, Method: Composition-based stats. Identities = 75/272 (27%), Positives = 117/272 (43%), Gaps = 43/272 (15%) Query: 353 KENIEFKYMNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRP----CAS 408 + +E + G+ + + + +TE + +R A S C + Sbjct: 1706 ERVLEVDQAPIGKTPRSCAATYLGLWDGIRQLFADTEEARIRGYTASRFSFNTGPGRCPT 1765 Query: 409 CEGT-----------------------RLRREARHVYVENTPLPAISDMSIGHAMEFFNN 445 CEG R E V + + M + A+EFF Sbjct: 1766 CEGQGAVKVAMNFLPDVTVPCTDCNGLRFNPETLAVRLRGRNAGEVLQMEVDEAVEFF-- 1823 Query: 446 LKLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGA-G 504 ++I L+ L +VGL YL L + + LSGGEAQRI+L +++ G Sbjct: 1824 ------------AAHRKIHHALQLLQDVGLGYLQLGQPSPFLSGGEAQRIKLVTELATAG 1871 Query: 505 LVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGA 564 +YVLDEP++GLH+ D E+L+ L L D G+TV+V+EHD D + AD +ID+GP Sbjct: 1872 TRPTVYVLDEPTVGLHKTDTEKLIRVLHRLTDSGHTVVVIEHDLDMMANADWLIDLGPEG 1931 Query: 565 GVHGGEVVAEGPLEAIMAVPES-LTGQYMSGK 595 G GG +V +GP + T + + Sbjct: 1932 GKGGGRLVMQGPTADFLEADAPGHTAKALRDA 1963 Score = 145 bits (367), Expect = 6e-33, Method: Composition-based stats. Identities = 70/230 (30%), Positives = 104/230 (45%), Gaps = 28/230 (12%) Query: 403 NRPCASCEGTRLRREARHVY------VENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIA 456 C C+G R R E V + + D+++ A++ F Sbjct: 801 YLRCPDCDGKRYRAEVLEVQLPAQAGFAPLNMAQVLDLTVAEALQRFRG----------- 849 Query: 457 EKILKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIG--------AGLVGV 508 +I L+ LV+VGL+YL L + TLSGGEAQR++LA + G Sbjct: 850 ---QADITRTLQALVDVGLDYLRLGQPTPTLSGGEAQRLKLAGFLADAAKTRAGLARKGT 906 Query: 509 MYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHG 568 +++ DEP+ GLH D +LL L L D G+TV+V+EH+ D I ++D VID+GP G G Sbjct: 907 LFLFDEPTTGLHFDDVAKLLRALRKLLDAGHTVLVIEHNLDVIASSDWVIDLGPEGGDAG 966 Query: 569 GEVVAEGPLEAIMAVPESLTGQYMSGKRKIEVPKKRVPANPEKVLKLTGA 618 G +V GP + + A S TGQ ++ + G Sbjct: 967 GRLVFAGPPDELAACATSFTGQALARDAAQRRAGQNPSPPQPSPPSGEGV 1016 Score = 75.4 bits (184), Expect = 9e-12, Method: Composition-based stats. Identities = 40/158 (25%), Positives = 65/158 (41%), Gaps = 6/158 (3%) Query: 568 GGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEVPKKRVPANPEKVLKLTGARGNNLKDVT 627 GG +++ E + + + A + + AR +NL+ V Sbjct: 1044 GGGREGAANASSLLQAAEPAATYSAADEPVGPHLASALRAGKAGFIAIRQAREHNLRGVD 1103 Query: 628 LTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIA------EPAPYRDIQGLEH 681 + +P G T ITGVSGSGKSTL D LF QR+ + A +PA D++ + Sbjct: 1104 VDIPRGEMTVITGVSGSGKSTLAFDVLFTEGQRRYLESINAYARQFVQPAARPDVEAIVG 1163 Query: 682 FDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVP 719 + I+Q +S T T + +R ++A Sbjct: 1164 IPPTVAIEQRTSRGGRKSTVGTLTEAYHFLRLIYAKCG 1201 >UniRef50_A0LG77 UvrA family protein n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LG77_SYNFM Length = 1895 Score = 933 bits (2412), Expect = 0.0, Method: Composition-based stats. Identities = 402/943 (42%), Positives = 580/943 (61%), Gaps = 37/943 (3%) Query: 3 KIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYAR 62 +I +RGAR HNL+ + +PR+++IV+TGLSGSGKSSLAFD L+AEGQRRY+E LSAY R Sbjct: 957 EIVIRGAREHNLQVDEIRLPRNEMIVLTGLSGSGKSSLAFDVLFAEGQRRYLECLSAYVR 1016 Query: 63 QFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCPD 122 Q+ +MEKPDV+ I GL P I+IEQ+++ N RSTV TITEI+ +LRLL++++G CPD Sbjct: 1017 QYFKIMEKPDVEQILGLPPTIAIEQRTSRLNRRSTVATITEIYHFLRLLYSKLGRQHCPD 1076 Query: 123 HDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARIDGE 182 LA+ T Q++ V ++ +LLAP+++ RKG + L G+ + R+DG+ Sbjct: 1077 CGRELASLTYDQILSMVEAEARKGNNLLLAPLVRGRKGIYRDLFMRLRKMGFEKVRVDGQ 1136 Query: 183 VCDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVADMDDPKA 242 L P++ ++H IEV+V + LAE AL L GT + Sbjct: 1137 WMPLDPVPEIARHREHDIEVLVSAAGTKKGPRATLAERVRQALSLGAGTLHLE-----GN 1191 Query: 243 EELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPELSL 302 E ++S CP C + L+PRLFSFN+ GACP+C GLG + F +R++ P++ L Sbjct: 1192 ESRVYSQRLYCPACEKGLAPLDPRLFSFNSRHGACPSCTGLGTVRQFSVERLLGPPDMPL 1251 Query: 303 AGGAIRG-----WDRRNFYYFQMLKSLA-DHYKFDVEAPWGSLSANVHKVVLYGSGKENI 356 G + W + + L+ D D PW L + + +L+G G+ Sbjct: 1252 KDGLLGFLRSQVWPKGLKTEGRKLERFWIDRLGIDPGRPWRELPEDAREAMLHGRGRGA- 1310 Query: 357 EFKYMNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGTRLRR 416 G+L +ER KE +S+ L F + C C G RL R Sbjct: 1311 ------------------PGLLAVLER-VKEEDSAW--SSLEPFHDDVVCPECGGRRLNR 1349 Query: 417 EARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNVGLN 476 +AR V V+ + ++ ++I + + + + I I +E+ +R+ FL VGL+ Sbjct: 1350 QARSVAVQGLGIGDLTSLAISDFLRKWKRFRFDPKDRPIVAPISREVAERVSFLQKVGLD 1409 Query: 477 YLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRD 536 YL L R+ +TLSGGE QRIRLA+Q+G+ L GV YVLDEP+IGLH DN RLL +L L++ Sbjct: 1410 YLALDRAGDTLSGGETQRIRLAAQLGSNLRGVCYVLDEPTIGLHPVDNGRLLESLARLKE 1469 Query: 537 LGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKR 596 GNT++VVEHD D +R AD ++++GP AG GG + A+G EA+ +LTG + S Sbjct: 1470 KGNTILVVEHDADTMRQADTLVELGPEAGRGGGRLTAQGSFEALCGDARTLTGAWFSRSL 1529 Query: 597 -KIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLF 655 + + R L++ GA NLK + + +P+G T +TGVSG+GKSTL+++ ++ Sbjct: 1530 DDLYLASDRKTPGESGWLEIKGASARNLKKIDVRVPLGALTVVTGVSGAGKSTLVHEVVY 1589 Query: 656 PIAQRQLNGA-TIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVREL 714 + +L G + PA + G + +V+++D +PIGRTPRS PATY G++ +R++ Sbjct: 1590 RGLRERLGGRYKVRAPAELESMSGHDAVQRVLEVDHNPIGRTPRSTPATYVGIWDEIRKI 1649 Query: 715 FAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRE 774 FA +PESRARG+ PGRFS+NV+GGRCE+C+G G I+VEM FLPD+ VPC+ C G R+N E Sbjct: 1650 FAMLPESRARGFNPGRFSYNVKGGRCESCKGQGEIRVEMSFLPDVSVPCETCGGSRFNTE 1709 Query: 775 TLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGE 834 TL +YKGK+I +VL MTI+EA E FDA P +A+ L+ L D+GL Y+ +GQS+ TLSGGE Sbjct: 1710 TLAARYKGKSIADVLKMTIDEAAELFDAYPRVAKPLRVLTDLGLGYLAIGQSSPTLSGGE 1769 Query: 835 AQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDV 894 AQR+KLA EL T TLY+LDEPTTGLH AD+++L+DVL L G+T++VIEHN+D Sbjct: 1770 AQRIKLASELGNNRT-HTLYVLDEPTTGLHRADVKKLVDVLRALSAHGHTVLVIEHNMDF 1828 Query: 895 IKTADWIVDLGPEGGSGGGEILVSGTPETVAEC-EASHTARFL 936 + AD+++D+GP G+ GG ++ G P + E S TAR L Sbjct: 1829 VWAADYVIDIGPGSGAKGGRVVAKGAPAELLAQGERSATARAL 1871 Score = 845 bits (2183), Expect = 0.0, Method: Composition-based stats. Identities = 389/945 (41%), Positives = 546/945 (57%), Gaps = 36/945 (3%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 63 I +RG R HNLKNI+L +P +KLI V+GLSGSGKSSLA TLYAEGQRRYVE+ S YARQ Sbjct: 14 IRLRGVRQHNLKNIDLDLPLNKLIAVSGLSGSGKSSLALHTLYAEGQRRYVETFSPYARQ 73 Query: 64 FLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCPDH 123 FL M+ P+ D IEG+ P I+IE + + RSTVGTITEI+D+L+LL+AR+ CP+ Sbjct: 74 FLERMDPPEADLIEGIPPGIAIESGTAVRSSRSTVGTITEINDHLKLLYARLAVLHCPEC 133 Query: 124 DVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARIDGEV 183 D P+A T + ++ P+ R+++ P + + G+ + +L + G++R + G Sbjct: 134 DRPVARDTPESVYRSLQELPDRSRVLIAFPFLPDNSGDW---VRSLVASGFLRLYVGGRT 190 Query: 184 CDLSDP-PKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVADMDDPKA 242 +L + + + VVVDR +R+A+S TA G A V + D Sbjct: 191 VELEEIGDAASEYGRGEVLVVVDRLSWGSAARERVADSLATAFHAGNGHAAVVVLPD--- 247 Query: 243 EELLFSANFACPIC--GYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPEL 300 FS++ +C C G S P LFSFN+P GACP C G G D D VI + L Sbjct: 248 TVKRFSSDLSCADCNPGLSFSPPTPNLFSFNSPLGACPECRGFGRTIGVDLDLVIPDRRL 307 Query: 301 SLAGGAIRGWDRRNFYYFQMLKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKENIEFKY 360 +L GAI+ + + L V+ P+ L + ++ G+ Sbjct: 308 TLRRGAIKPFGTDR-METEDLMRFCAGEGIPVDVPFEDLDEKDREKIINGTKD------- 359 Query: 361 MNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGTRLRREARH 420 + G+ E +T VR L+++ + C SC GTR R E Sbjct: 360 -------------YYGIKGYFEWLEGKTYKMHVRVFLSRYRAYTRCRSCAGTRYRPETLL 406 Query: 421 VYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTL 480 + + A+S SI EFF+ R AE ++KE+ RL+FL VGL YL+L Sbjct: 407 YRLHGETIGALSAWSIEKCAEFFSGGWPELARDPAAELLVKEVRSRLEFLRAVGLEYLSL 466 Query: 481 SRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNT 540 R + TLSGGE QR+ L +G+ +V V+YVLDEPS+GLH RD +RL+G L L D+GNT Sbjct: 467 DRQSRTLSGGEVQRVHLTRALGSAMVNVLYVLDEPSVGLHARDQKRLMGQLRRLVDIGNT 526 Query: 541 VIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIE- 599 V+VVEHD D IR D V+D+GP G GGE+V G E + SLTG Y+SG+ ++ Sbjct: 527 VVVVEHDPDMIRFCDLVVDMGPEGGEKGGEIVYRGTPEGMKREKRSLTGGYLSGRLEVGC 586 Query: 600 VPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQ 659 ++R + L L GAR NNLK+VT+ P+G+ ++GVSGSGKSTL+ +L+ Sbjct: 587 ELRRRRRPENGRSLVLRGARENNLKNVTVEFPLGILVGVSGVSGSGKSTLVEKSLYYNWL 646 Query: 660 RQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVP 719 R++ G P ++G E ++V+ +DQ IGRTPR+N TY+ P+R+L A P Sbjct: 647 RKM-GRATEAPGALDAMEGAEWIEEVVLVDQQAIGRTPRANLLTYSRAIDPIRKLLAQTP 705 Query: 720 ESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIK 779 E+ ARGY FSFNV GGRCE C+G+G +VEM FL D+ + C QC G R+ E LE++ Sbjct: 706 EAVARGYPASHFSFNVPGGRCELCKGEGFERVEMQFLADVLIRCPQCNGLRFKDEILEVR 765 Query: 780 YKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVK 839 +G +I ++L+ T E + F L + LQ + D+GL Y+RLGQ +TLSGGEAQR+K Sbjct: 766 ARGLSIGDMLEATARELMDRFADHEPLVKALQPIQDIGLGYLRLGQPLSTLSGGEAQRLK 825 Query: 840 LARELSKRGTG----QTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVI 895 L L+ L+ILDEPTTGLH D+Q+L+ VL +L D G++++V+EHNLD + Sbjct: 826 LVHFLAAGRPSSNGRHRLFILDEPTTGLHPHDLQKLVVVLRRLVDLGHSVLVVEHNLDFL 885 Query: 896 KTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLKPML 940 K+ DW++DLGP GG GGE++ +G PE VA S T RFL+ L Sbjct: 886 KSCDWLIDLGPGGGEHGGEVVATGPPEAVAAHPESCTGRFLREKL 930 Score = 210 bits (534), Expect = 3e-52, Method: Composition-based stats. Identities = 128/477 (26%), Positives = 210/477 (44%), Gaps = 57/477 (11%) Query: 406 CASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGD 465 C C G R + E V + + + + M+ F + + + Sbjct: 749 CPQCNGLRFKDEILEVRARGLSIGDMLEATARELMDRFAD--------------HEPLVK 794 Query: 466 RLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVG-----VMYVLDEPSIGLH 520 L+ + ++GL YL L + TLSGGEAQR++L + AG +++LDEP+ GLH Sbjct: 795 ALQPIQDIGLGYLRLGQPLSTLSGGEAQRLKLVHFLAAGRPSSNGRHRLFILDEPTTGLH 854 Query: 521 QRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAI 580 D ++L+ L L DLG++V+VVEH+ D +++ D +ID+GPG G HGGEVVA GP EA+ Sbjct: 855 PHDLQKLVVVLRRLVDLGHSVLVVEHNLDFLKSCDWLIDLGPGGGEHGGEVVATGPPEAV 914 Query: 581 MAVPESLTGQYMSGKRKIEVPKKRVPANPEK-----------VLKLTGARGNNLKDVTLT 629 A PES TG+++ K + + + A + + + GAR +NL+ + Sbjct: 915 AAHPESCTGRFLREKLEGALGARAEAAPFDPGEDGAAGSPSREIVIRGAREHNLQVDEIR 974 Query: 630 LPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAEPAPYRDIQGLEHFDKV---- 685 LP +TG+SGSGKS+L D LF QR+ A Y I +++ Sbjct: 975 LPRNEMIVLTGLSGSGKSSLAFDVLFAEGQRRYLECLSAYVRQYFKIMEKPDVEQILGLP 1034 Query: 686 --IDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVP--ESRARGYTPGRFSFNVRGGRCE 741 I I+Q RS AT T ++ +R L++ + G +++ E Sbjct: 1035 PTIAIEQRTSRLNRRSTVATITEIYHFLRLLYSKLGRQHCPDCGRELASLTYDQILSMVE 1094 Query: 742 ACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFD 801 A G + + +G++ L ++ + +V ++ D Sbjct: 1095 AEARKG----------NNLLLAPLVRGRKGIYRDLFMRLRKMGFEKV---RVDGQWMPLD 1141 Query: 802 AVPALARKLQTLMDVGLTYIRLGQSAT-TLSGGEAQRVKL---ARELSKRGTGQTLY 854 VP +AR + ++V ++ + TL E R L A L G +Y Sbjct: 1142 PVPEIARHREHDIEVLVSAAGTKKGPRATL--AERVRQALSLGAGTLHLEGNESRVY 1196 Score = 154 bits (390), Expect = 1e-35, Method: Composition-based stats. Identities = 66/194 (34%), Positives = 104/194 (53%), Gaps = 15/194 (7%) Query: 761 VPCDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDA--------------VPAL 806 V C +C G+R NR+ + +G I ++ + I + + + Sbjct: 1337 VVCPECGGRRLNRQARSVAVQGLGIGDLTSLAISDFLRKWKRFRFDPKDRPIVAPISREV 1396 Query: 807 ARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFA 866 A ++ L VGL Y+ L ++ TLSGGE QR++LA +L G Y+LDEPT GLH Sbjct: 1397 AERVSFLQKVGLDYLALDRAGDTLSGGETQRIRLAAQLGSNLRG-VCYVLDEPTIGLHPV 1455 Query: 867 DIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAE 926 D +LL+ L +L+++GNTI+V+EH+ D ++ AD +V+LGPE G GGG + G+ E + Sbjct: 1456 DNGRLLESLARLKEKGNTILVVEHDADTMRQADTLVELGPEAGRGGGRLTAQGSFEALCG 1515 Query: 927 CEASHTARFLKPML 940 + T + L Sbjct: 1516 DARTLTGAWFSRSL 1529 Score = 54.2 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 53/261 (20%), Positives = 94/261 (36%), Gaps = 33/261 (12%) Query: 3 KIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYAR 62 + +RGAR +NLKN+ + P L+ V+G+SGSGKS+L +LY R+ + A Sbjct: 599 SLVLRGARENNLKNVTVEFPLGILVGVSGVSGSGKSTLVEKSLYYNWLRKMGRATEAPG- 657 Query: 63 QFLSLMEKPDVDHIEG---LSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEP- 118 +D +EG + + ++Q++ PR+ + T + D +R L A+ E Sbjct: 658 ---------ALDAMEGAEWIEEVVLVDQQAIGRTPRANLLTYSRAIDPIRKLLAQTPEAV 708 Query: 119 ----------------RCPDHDVPLAAQTVSQMVDNVLSQPE---GKRLMLLAPIIKERK 159 RC + Q + +VL + G R ++ R Sbjct: 709 ARGYPASHFSFNVPGGRCELCKGEGFERVEMQFLADVLIRCPQCNGLRFKDEILEVRARG 768 Query: 160 GEHTKTLENLASQGYIRARIDGEVCDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAE 219 LE A + R + P + + + + +L Sbjct: 769 LSIGDMLEATARELMDRFADHEPLVKALQPIQDIGLGYLRLGQPLSTLSGGEAQRLKLVH 828 Query: 220 SFETALELSGGTAVVADMDDP 240 S G + +D+P Sbjct: 829 FLAAGRPSSNGRHRLFILDEP 849 Score = 43.1 bits (100), Expect = 0.055, Method: Composition-based stats. Identities = 36/123 (29%), Positives = 58/123 (47%), Gaps = 6/123 (4%) Query: 601 PKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQR 660 PKK P E +++L G R +NLK++ L LP+ ++G+SGSGKS+L TL+ QR Sbjct: 2 PKKSSPNGNEPLIRLRGVRQHNLKNIDLDLPLNKLIAVSGLSGSGKSSLALHTLYAEGQR 61 Query: 661 QLNGATIAEPAPYRDIQG------LEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVREL 714 + + + +E I I+ R+ RS T T + ++ L Sbjct: 62 RYVETFSPYARQFLERMDPPEADLIEGIPPGIAIESGTAVRSSRSTVGTITEINDHLKLL 121 Query: 715 FAG 717 +A Sbjct: 122 YAR 124 >UniRef50_D2R1K2 Excinuclease ABC, A subunit n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2R1K2_9PLAN Length = 966 Score = 932 bits (2409), Expect = 0.0, Method: Composition-based stats. Identities = 382/954 (40%), Positives = 545/954 (57%), Gaps = 38/954 (3%) Query: 3 KIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYAR 62 IE+RG HNL+ ++L +P KL+V G+SGSGK+SLA DTLYAEGQRRY+ES S Y R Sbjct: 18 SIELRGVEVHNLRMVDLDVPLGKLVVFCGVSGSGKTSLALDTLYAEGQRRYLESFSVYTR 77 Query: 63 QFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCPD 122 QFL +EKPDV+ I+ L AI++ + + RST+GT TE DYLRLL A+V E C Sbjct: 78 QFLQKLEKPDVERIDNLPAAIAVSHDDAARSSRSTIGTATETLDYLRLLMAKVAELTCHG 137 Query: 123 HDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARIDGE 182 + + S + V S +LML +L +G+ R + Sbjct: 138 CGKSIRKASASTIAAEVQSLDPSTKLMLGFFEPVPEGIALETLAASLRGRGFSRGVVGET 197 Query: 183 VCDLSDPP-KLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAV-------- 233 L P ++ + V+VDR QRL +S ET+L GG V Sbjct: 198 SFMLDTIPSEMVSSSASELGVIVDRI-TPTVAQQRLLDSLETSLTSGGGACVLWRAVRDD 256 Query: 234 ------VADMDDPKAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQ 287 V +D + + L +S C C + P+LFSFN+P GAC C+G G Sbjct: 257 ETSTPDVVVIDGQRWQRLDYSQRLQCRACQIVYSDPTPQLFSFNSPLGACNVCEGFGSTI 316 Query: 288 YFDPDRVIQNPELSLAGGAIRGWDRRNFYY-FQMLKSLADHYKFDVEAPWGSLSANVHKV 346 D ++ + S+ GAI W+ + + Q L +LA YK V+ P+ L+ ++ Sbjct: 317 DLDDALIVPDRSKSIREGAIAPWNSPAYLHELQELLALAPDYKLPVDVPYSELTEKHKQL 376 Query: 347 VLYGSGKENIEFKYMNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPC 406 + G + F G+ + +R L+++ S++ C Sbjct: 377 IREGVPE------------------RDFGGLRGFFAWLERRKYKMHIRVFLSRWRSSKLC 418 Query: 407 ASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDR 466 +C G RL E+ + + I+ + I A E L L+ + K+A +L +I R Sbjct: 419 HACHGARLNAESLSWRIAGKNISEITALRIDEAAELLAALSLSATQKKLARVMLDQIQSR 478 Query: 467 LKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNER 526 L FL VGL YL L R+ TLSGGEAQR+ L S +G+ LV ++YVLDEPS+GLH D ER Sbjct: 479 LAFLRQVGLGYLKLDRTLRTLSGGEAQRVALTSALGSSLVNMLYVLDEPSVGLHPSDVER 538 Query: 527 LLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPES 586 LL + LRD GNTV++VEH+E +R +D ++++GPGAG GG + G L+ ++A + Sbjct: 539 LLVAVKGLRDRGNTVVLVEHEEQMLRESDWLVEVGPGAGDAGGNITFSGELDEMLA-GTT 597 Query: 587 LTGQYMSGKRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGK 646 +TG +++G+R + +P R A LKL+GARGNNLK++T+ P+G+ +TGVSGSGK Sbjct: 598 VTGDFLAGRRGVAIPAARRTAT-RGWLKLSGARGNNLKNLTVEFPLGVMCLVTGVSGSGK 656 Query: 647 STLINDTLFPIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTG 706 STL+ +TL+ ++ P Y D+ G D VI +DQSPIGR+ RSNP TY Sbjct: 657 STLVQETLYGALCKR-KRKDCDPPLDYDDVVGDGQIDDVILVDQSPIGRSGRSNPVTYIK 715 Query: 707 VFTPVRELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQC 766 F P+R +FA ++R YT G FSFNV GGRC+ACQG+G ++++M FL D+ C C Sbjct: 716 AFDPIRAVFAEQVDARTHNYTAGHFSFNVDGGRCDACQGEGFLRIDMQFLADVLRKCPAC 775 Query: 767 KGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQS 826 G RY +E L++KY+G++I EVL+MT EA FF P + KL+ L+DVGL Y+RLGQ Sbjct: 776 GGSRYRKEILQVKYRGRSIAEVLEMTAREAFSFFRGQPKVQGKLKQLIDVGLDYLRLGQP 835 Query: 827 ATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIV 886 A+TLS GEAQR+KLA LS+ +TL+ILDEPTTGLHFAD+ +LLD L D G++++ Sbjct: 836 ASTLSSGEAQRLKLAAFLSEASRNRTLFILDEPTTGLHFADVVKLLDCFEALLDVGHSLI 895 Query: 887 VIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLKPML 940 ++EHNL +++ AD+++DLGP G GG ++ GTPE VA S T ++L L Sbjct: 896 IVEHNLQLMRAADYLIDLGPGAGDAGGTVIAQGTPEQVATSPLSLTGKYLAASL 949 >UniRef50_B9XQK9 Excinuclease ABC, A subunit n=3 Tax=Bacteria RepID=B9XQK9_9BACT Length = 1048 Score = 930 bits (2405), Expect = 0.0, Method: Composition-based stats. Identities = 376/1040 (36%), Positives = 529/1040 (50%), Gaps = 112/1040 (10%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 63 I +RG R +NLKN +L +P+++LIV+TGLSGSGKSSLAFDTL+AEGQRRY+E+ S YARQ Sbjct: 12 IRLRGVRHNNLKNFDLDLPQNQLIVITGLSGSGKSSLAFDTLFAEGQRRYIETFSPYARQ 71 Query: 64 FLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCPDH 123 F M+KP VD IEG+ PAI+IEQ+++ RSTVGT+TE+ DY++LL+ V + C Sbjct: 72 FFDRMDKPQVDSIEGIPPAIAIEQRNSVKTTRSTVGTMTELCDYMKLLWPHVSQLYCRQC 131 Query: 124 DVPLAAQTVSQMVDNVLSQPEGKR--------LMLLAPIIKERKGEHTKTLENLASQGYI 175 P+ ++ + LS + R +++ + K ++L ++ QGY Sbjct: 132 HQPVRKDPPQRIWE-TLSAEQKTRDNGAKVDEVLVTFALPISEKLSLDESLALISKQGYQ 190 Query: 176 RARIDGEVCDLSDPPKLELQ-KKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVV 234 R ++ +V L + L + K T+ V+ DR K+ + R E+ E A G + Sbjct: 191 RLLVNNKVVRLEEATDLLRRVKPETVTVIQDRVKIARENRARFVEACEQAYHFGKGKLSL 250 Query: 235 ADMDDPK-------AEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQ 287 + FS C C +E LFSFN+P GACPTC G G Sbjct: 251 HYVTAESTDTQHAIRHIRPFSNKLHCATCDIDYKESSTALFSFNHPIGACPTCRGFGRTI 310 Query: 288 YFDPDRVIQNPELSLAGGAIRGWDRRNFYYFQM-LKSLADHYKFDVEAPWGSLSANVHKV 346 D D + + +LA GA++ W Q L + + + L A Sbjct: 311 TIDYDLALPDKTKTLAEGAVKPWQTGQGAESQADLMKFCRTRRVPTDVRFKDLPAGFQDW 370 Query: 347 VLYGSGKENIEFKYMNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPC 406 V+ G + + G+ + VR L+++ S C Sbjct: 371 VINGDKD--------YGKDSMHEWPRAWYGIKGYFRWLESKAYKMHVRVLLSRYRSYVLC 422 Query: 407 ASCEGTRLRREARHVYVENT-----------------PLPAISDMSIGHAMEFFNNLKLA 449 C G R + E V++ L + + A+ F L Sbjct: 423 PDCHGQRFQAETLLYKVQSKFSPRNAPSNGSSQTSLITLSDFYRLPLRDALAFIEELSTR 482 Query: 450 GQRAKIA--EKILKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVG 507 + I E+ RL +L NVGL YLTL R +LSGGE +R+ L + +G LV Sbjct: 483 HNVKPSSPLGLIFNEVRARLGYLNNVGLGYLTLDRPTRSLSGGETERVNLTTCLGTRLVN 542 Query: 508 VMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVH 567 ++VLDEPS+GLH RD RL+ L LR+ GNTV+VVEH+ +RAAD +IDIGPG G Sbjct: 543 TLFVLDEPSVGLHPRDTGRLVNILEQLRNAGNTVVVVEHEASVMRAADQIIDIGPGHGAT 602 Query: 568 GGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEVPKKRV--------------------PA 607 GG+VV +G I+ P SLTGQY+SG R I +P++R Sbjct: 603 GGQVVFQGSYTDILKSPVSLTGQYLSGTRDIPLPQRRHVRLETKGAKPTRNGRGQAAAEP 662 Query: 608 NPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQ-------- 659 L L A +NL+D+T+ +P+ F CITGVSGSGK+TL + L P+ Sbjct: 663 AKTSFLTLAHAIQHNLQDLTVRIPLERFVCITGVSGSGKTTLAREVLLPLLSSSLNEPES 722 Query: 660 -----------RQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVF 708 T + G E +V+ +DQS +G+TPRSNPA Y G F Sbjct: 723 SPSESEDNEETEHATRNTQLGNGHTPTLTGSESLGRVVLVDQSILGKTPRSNPAVYIGAF 782 Query: 709 TPVRELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKG 768 +R++FA +R RG FSFN G+CE C+G G K+EM FL D+++ C +C G Sbjct: 783 DDIRDVFAQSELARQRGLNSSAFSFNSGQGQCERCRGAGFEKIEMQFLSDVFIKCPECNG 842 Query: 769 KRYNRETLEIKY----------------KGKTIHEVLDMTIEEAREFFD------AVPAL 806 +RY LEIK + +I ++LD T++EA +F A Sbjct: 843 RRYRPHILEIKVQPPLVSSNAANADSRSREMSIADLLDATVDEAVDFLSQFLDSKAASRA 902 Query: 807 ARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSK------RGTGQTLYILDEPT 860 A+ L+ L DVGL Y+R+GQ TLSGGE+QR+KL R L++ T TL++ DEPT Sbjct: 903 AQSLKLLQDVGLGYLRVGQPINTLSGGESQRLKLVRHLAEFSHSSAGDTKPTLFLFDEPT 962 Query: 861 TGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGT 920 TGLHF D++ LL V +L D +++V+IEHNLDVIK+ADW++DLGP+ G GGEI+ GT Sbjct: 963 TGLHFDDVRVLLKVFQRLVDARHSVVIIEHNLDVIKSADWVIDLGPDAGDRGGEIVAEGT 1022 Query: 921 PETVAECEASHTARFLKPML 940 PE VA C SHT + LK L Sbjct: 1023 PEEVAACAKSHTGQALKAEL 1042 Score = 167 bits (423), Expect = 2e-39, Method: Composition-based stats. Identities = 67/219 (30%), Positives = 105/219 (47%), Gaps = 31/219 (14%) Query: 406 CASCEGTRLRREARHVYVEN----------------TPLPAISDMSIGHAMEFFNNLKLA 449 C C G R R + V+ + + D ++ A++F + + Sbjct: 837 CPECNGRRYRPHILEIKVQPPLVSSNAANADSRSREMSIADLLDATVDEAVDFLSQFLDS 896 Query: 450 GQRAKIAEKILKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIG------- 502 ++ A+ LK L +VGL YL + + TLSGGE+QR++L + Sbjct: 897 KAASRAAQS--------LKLLQDVGLGYLRVGQPINTLSGGESQRLKLVRHLAEFSHSSA 948 Query: 503 AGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGP 562 +++ DEP+ GLH D LL L D ++V+++EH+ D I++AD VID+GP Sbjct: 949 GDTKPTLFLFDEPTTGLHFDDVRVLLKVFQRLVDARHSVVIIEHNLDVIKSADWVIDLGP 1008 Query: 563 GAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEVP 601 AG GGE+VAEG E + A +S TGQ + + E P Sbjct: 1009 DAGDRGGEIVAEGTPEEVAACAKSHTGQALKAELAGEHP 1047 Score = 70.8 bits (172), Expect = 3e-10, Method: Composition-based stats. Identities = 38/111 (34%), Positives = 51/111 (45%), Gaps = 6/111 (5%) Query: 610 EKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAE 669 V++L G R NNLK+ L LP ITG+SGSGKS+L DTLF QR+ Sbjct: 9 PAVIRLRGVRHNNLKNFDLDLPQNQLIVITGLSGSGKSSLAFDTLFAEGQRRYIETFSPY 68 Query: 670 PAPYRDIQGLEHFDKV------IDIDQSPIGRTPRSNPATYTGVFTPVREL 714 + D D + I I+Q +T RS T T + ++ L Sbjct: 69 ARQFFDRMDKPQVDSIEGIPPAIAIEQRNSVKTTRSTVGTMTELCDYMKLL 119 >UniRef50_C6VXN3 Excinuclease ABC, A subunit n=3 Tax=Bacteroidetes RepID=C6VXN3_DYAFD Length = 968 Score = 927 bits (2396), Expect = 0.0, Method: Composition-based stats. Identities = 423/975 (43%), Positives = 583/975 (59%), Gaps = 65/975 (6%) Query: 3 KIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYAR 62 I ++GAR +NLKNI++ IPR+KL+V+TGLSGSGKSSLAFDTL+AEGQR YVESLS+YAR Sbjct: 22 YILIKGARVNNLKNIDVAIPRNKLVVITGLSGSGKSSLAFDTLFAEGQRMYVESLSSYAR 81 Query: 63 QFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCPD 122 QFL MEKP+V++I+G+SPAI+IEQK + NPRSTVGT TEI+DYL+LLFAR+G P Sbjct: 82 QFLGRMEKPEVEYIKGISPAIAIEQKVNTRNPRSTVGTSTEIYDYLKLLFARIGHTYSPV 141 Query: 123 HDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARIDGE 182 + +V+ +V+ +L+ EG R+M+LAP++ + L L S+GY R ++ E Sbjct: 142 SGEIVRKDSVTDVVNYMLAHDEGTRVMILAPLLIRDGRSQIEELTILLSKGYNRIVLNDE 201 Query: 183 VCDLSDPPKLELQKKH---TIEVVVDRFKVRDDLTQ---RLAESFETALELSGGTAVVAD 236 V + D + Q + +++DR +R D RL++S +TA GT V Sbjct: 202 VVSIEDILENPDQFPQAGNRVFILIDRAAIRHDDEDTQYRLSDSVQTAFFEGEGTCTVHI 261 Query: 237 MDDPKAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQ 296 + E+ +FS F G + E LFSFNNP GAC C+G G DPD VI Sbjct: 262 V---GGEKRVFSDKFELD--GITFEEPTVNLFSFNNPFGACKRCEGFGKILGIDPDLVIP 316 Query: 297 NPELSLAGGAIRGWDRRNFYYFQM-LKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKEN 355 + LS+ GAI W + + L + F + P+ L+ +++ G Sbjct: 317 DKNLSVYDGAIAPWRTEKMGEWLVPLVRNGVKFDFPIHRPYKDLTPVQKELLWTG----- 371 Query: 356 IEFKYMNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGTRLR 415 F+G+ + +T R L++F C C G+RLR Sbjct: 372 ---------------NQYFQGINDFVSELESQTHKIQYRVMLSRFRGRTTCPDCRGSRLR 416 Query: 416 REARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNVGL 475 ++A +V + + + M I FF L+L +IA ++L EI RL ++ VGL Sbjct: 417 KDASYVKIGGKSITDLVLMPIQDVSVFFKQLELGDHDRQIARRVLTEIESRLDYMNRVGL 476 Query: 476 NYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLR 535 YLTL+R TLSGGE QRI+LA+ +G+ LVG MY+LDEPSIGLH RD +RL+G L LR Sbjct: 477 GYLTLNRLTSTLSGGEFQRIKLATSLGSALVGSMYILDEPSIGLHPRDTQRLVGVLESLR 536 Query: 536 DLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAI--------------- 580 DLGNTVIVVEH+E+ + AAD +IDIGP AG GG VV +G I Sbjct: 537 DLGNTVIVVEHEEEVMHAADQIIDIGPEAGTGGGHVVFQGNQSDIEELKINGSGAGNSQE 596 Query: 581 -----------MAVPESLTGQYMSGKRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLT 629 S T ++ G I VP R L++ GAR NNLK++ + Sbjct: 597 GIGSQEVMSSGAGHMRSHTLDFLLGNDSIPVPSVR--RKSLHFLEIKGARENNLKELDVK 654 Query: 630 LPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAEPAPYRDIQG-LEHFDKVIDI 688 +P+ T +TGVSGSGKSTLI L+P R L G + + + G ++ + V I Sbjct: 655 IPLNNLTVVTGVSGSGKSTLIRKILYPALMR-LKGEFSEDVGRFDALTGSIDRIEAVEMI 713 Query: 689 DQSPIGRTPRSNPATYTGVFTPVRELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGV 748 DQ+PIG++ RSNP TY + +R++ + P S+ARGY P FSFNV GGRCE CQG+G Sbjct: 714 DQNPIGKSSRSNPVTYIKAYDYIRQMMSEQPLSKARGYKPSHFSFNVDGGRCEICQGEGE 773 Query: 749 IKVEMHFLPDIYVPCDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDA-VPALA 807 +KVEM F+ DIY+ C+ C GKR+ +E E++Y K I E+LDMT++EA +FF P LA Sbjct: 774 VKVEMQFMADIYLTCEGCNGKRFKQEIQEVRYHDKDIAEILDMTVDEAIDFFRETEPKLA 833 Query: 808 RKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGT--GQTLYILDEPTTGLHF 865 KL L +VGL Y+ LGQS+ TLSGGEAQRVKLA L K + G+TL+I DEPTTGLHF Sbjct: 834 DKLLPLQEVGLGYVGLGQSSNTLSGGEAQRVKLASFLGKGSSNKGKTLFIFDEPTTGLHF 893 Query: 866 ADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVA 925 DI++LL ++ L +QG+++++IEHN++VIK+ADWI+DLGPEGG GG + +GTPE + Sbjct: 894 HDIKKLLKAINALVEQGDSVIIIEHNMEVIKSADWIIDLGPEGGENGGNLTFTGTPEEML 953 Query: 926 ECEASHTARFLKPML 940 + + ++TA FLK + Sbjct: 954 KLDGNYTAEFLKEKI 968 Score = 89.7 bits (221), Expect = 5e-16, Method: Composition-based stats. Identities = 36/115 (31%), Positives = 58/115 (50%), Gaps = 10/115 (8%) Query: 1 MDKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAY 60 + +E++GAR +NLK +++ IP + L VVTG+SGSGKS+L LY R E Sbjct: 635 LHFLEIKGARENNLKELDVKIPLNNLTVVTGVSGSGKSTLIRKILYPALMRLKGE----- 689 Query: 61 ARQFLSLMEKPDV--DHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFA 113 F + + D I+ + I+Q + RS T + +DY+R + + Sbjct: 690 ---FSEDVGRFDALTGSIDRIEAVEMIDQNPIGKSSRSNPVTYIKAYDYIRQMMS 741 Score = 75.4 bits (184), Expect = 1e-11, Method: Composition-based stats. Identities = 38/119 (31%), Positives = 60/119 (50%), Gaps = 6/119 (5%) Query: 608 NPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATI 667 +P + + + GAR NNLK++ + +P ITG+SGSGKS+L DTLF QR + Sbjct: 18 DPRQYILIKGARVNNLKNIDVAIPRNKLVVITGLSGSGKSSLAFDTLFAEGQRMYVESLS 77 Query: 668 AEPAPYRDI---QGLEHFDKV---IDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPE 720 + + +E+ + I I+Q R PRS T T ++ ++ LFA + Sbjct: 78 SYARQFLGRMEKPEVEYIKGISPAIAIEQKVNTRNPRSTVGTSTEIYDYLKLLFARIGH 136 >UniRef50_B2UPV5 Excinuclease ABC, A subunit n=5 Tax=Bacteria RepID=B2UPV5_AKKM8 Length = 1840 Score = 927 bits (2395), Expect = 0.0, Method: Composition-based stats. Identities = 387/955 (40%), Positives = 551/955 (57%), Gaps = 37/955 (3%) Query: 3 KIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYAR 62 +I +RGAR HNL+N+++ IP +L VVTG SGSGK+SLA TLYAEGQRRY+E+ S Y R Sbjct: 8 RIRIRGAREHNLQNVDVDIPLGRLTVVTGPSGSGKTSLAMHTLYAEGQRRYMETFSPYVR 67 Query: 63 QFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCPD 122 QF+ M+KPDVD +E + PAI++ Q+++ RSTVGT+T ++DY + +FAR+ P+ Sbjct: 68 QFMDRMDKPDVDAVENILPAIALHQRNSVRTSRSTVGTMTGLNDYWKFVFARLAVGIDPE 127 Query: 123 HDVPLAAQTVSQMVDNVLS-QPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARIDG 181 + +T + + + S P G +M+ + + + NL +QGY+RA G Sbjct: 128 TGREIKPETPGTIDEKLHSEFPAGTEVMVCLEVARPESVDLPSLKRNLVAQGYLRAFAHG 187 Query: 182 EVCDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVV-ADMDDP 240 E+ L D L++ + VV DR ++ +D +R E+ ETA+ L GG A V +D Sbjct: 188 EILRLEDE-DWTLEEGEPLLVVQDRVRLSEDQRERRLEALETAMRLGGGVAHVIPRVDGV 246 Query: 241 KAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPEL 300 L F ++ + E P LFSFN+P GACP C G G D +R I+ PEL Sbjct: 247 WLSALKFRGDWH------PLMEPRPGLFSFNSPLGACPECRGYGRVITIDYNRCIR-PEL 299 Query: 301 SLAGGAIRGWDRRNFYYF---QMLKSLADH--YKFDVEAPWGSLSANVHKVVLYGSGKEN 355 S+ GAI ++ + + L K ++ PW L +LYG G + Sbjct: 300 SVQDGAIHIFEGDGKVFSECKRDLMRGWRKNARKVRLDVPWKDLKQWERDWLLYGDGDD- 358 Query: 356 IEFKYMNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGTRLR 415 D + + G+ + T VR L++F + + C SC G RLR Sbjct: 359 ---------PDEMYEQGLWYGIAGFFKYLESRTHKMHVRVYLSRFRTYQECPSCHGLRLR 409 Query: 416 REARHVYVENTPLPAISDMSIGHAMEFFNN-LKLAGQRAKIAEKILKEIGDRLKFLVNVG 474 EA V +P +S M + + + + + + + E+ RL++L VG Sbjct: 410 PEALQFKVGGKSMPELSSMPMDELLVWVDRYVTPRADEDPGLKHAVAELRSRLEYLNEVG 469 Query: 475 LNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHL 534 L YLT RS +LSGGE +R+ L + +GA L ++VLDEP++GLH RD RL+ + L Sbjct: 470 LGYLTSDRSTRSLSGGEIERVSLTTCLGASLTDTLFVLDEPTVGLHPRDTSRLISAMNRL 529 Query: 535 RDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSG 594 + GNT++VVEH+E +RAAD ++D+GPG+G GG +V G I + ESLTG ++SG Sbjct: 530 KKRGNTLVVVEHEEAVMRAADCLVDMGPGSGREGGRLVYSGMPARIGEIEESLTGAFLSG 589 Query: 595 KRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTL 654 +R+I VPK+R + L ++GA +NL+ + + +P+GLFTC+TGVSGSGKSTL +D L Sbjct: 590 RRRIAVPKRRRKPR--QFLTVSGATRHNLRKLDVKVPLGLFTCLTGVSGSGKSTLAHDVL 647 Query: 655 FPIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVREL 714 + A + EPA + I+G EH D+V+ +DQSPI RTPRS PA Y GVF +R L Sbjct: 648 YLNALVEKGAVCEEEPARVKSIKGWEHLDEVVMVDQSPIVRTPRSTPAVYAGVFEEIRSL 707 Query: 715 FAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRE 774 FA +RARG PG FSFN GRC C G G KVEM FL DI+V C C G RY E Sbjct: 708 FAETETARARGMKPGFFSFNSGDGRCPRCMGMGSEKVEMQFLSDIFVQCPLCHGSRYGSE 767 Query: 775 TLEIKYKGKTIHEVLDMTIEEAREFFDAVP-----ALARKLQTLMDVGLTYIRLGQSATT 829 L + G+ I +VL MT+ A E F A +A KL L VGL ++ LGQ T Sbjct: 768 VLSVYRDGRNIADVLGMTVAAALECFSAEKGAKASRIASKLGVLQRVGLGHLTLGQPLNT 827 Query: 830 LSGGEAQRVKLARELSKR----GTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTI 885 LSGGE QR+KLA+ L + + ILDEP TGLHFADI+ LL V +L +QG+T+ Sbjct: 828 LSGGENQRLKLAKILLDQIGSGANSSKMLILDEPGTGLHFADIEVLLAVFRELVEQGHTL 887 Query: 886 VVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLKPML 940 +VIEHN + IK+AD+++DLGPEGG+GGG ++ +GTPE + +T ++L+ +L Sbjct: 888 LVIEHNPEFIKSADYVIDLGPEGGAGGGHVVATGTPEEIVAAGKGYTGKYLREVL 942 Score = 551 bits (1421), Expect = e-155, Method: Composition-based stats. Identities = 254/554 (45%), Positives = 350/554 (63%), Gaps = 18/554 (3%) Query: 404 RPCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEI 463 C +C G RL AR V ++ I+ + A E + + A IA ++ EI Sbjct: 1284 TTCPACRGVRLNEFARAVRLQGVTPGDIASLPAVAAAELVKGWQFEREEALIARDVVAEI 1343 Query: 464 GDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRD 523 RL FL VGL YL+L RSA TLSGGE QRIRLASQ+G+ L GV+YVLDEP+IGLH RD Sbjct: 1344 TQRLNFLQRVGLGYLSLDRSATTLSGGETQRIRLASQLGSHLRGVLYVLDEPTIGLHPRD 1403 Query: 524 NERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAV 583 NE LLGTL L+ GNT++VVEHDED +R ADH++D+GPGAG+HGG ++A+G E + A+ Sbjct: 1404 NELLLGTLDELKRRGNTLLVVEHDEDTMRRADHIVDMGPGAGIHGGRIMAQGTFEELAAM 1463 Query: 584 PESLTGQYMSGKRKIEVPKKRV----PANPEKVLKLTGARGNNLKDVTLTLPVGLFTCIT 639 P+S+TG + K + KR + L++ G +NLK V + +P G T +T Sbjct: 1464 PDSVTGAALHHKPRHPYRGKRRRIPSQKDESAWLRVEGCCLHNLKGVNVAIPKGRLTVLT 1523 Query: 640 GVSGSGKSTLINDTLFPIAQRQLNGATIAEPAPY-RDIQGLEHFDKVIDIDQSPIGRTPR 698 GVSG+GK++L+ T+ A++ + E + G + V +DQ+PIG+TPR Sbjct: 1524 GVSGAGKTSLMTGTIRLAARQAIGDKLTREQRKLWKTSSGFDSIRMVYGVDQNPIGKTPR 1583 Query: 699 SNPATYTGVFTPVRELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPD 758 S PATY G +R LFA ++R G+ GRFSFN G CE+C+G G+ K+EM FLP Sbjct: 1584 STPATYVGFLDDIRTLFAQTADARRLGFDRGRFSFNTGQGNCESCKGTGMQKLEMDFLPP 1643 Query: 759 IYVPCDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGL 818 YVPC+ C+GKRYN TL ++YKGKTI +VL M EA EFF++ P ++ L+ L + GL Sbjct: 1644 CYVPCETCRGKRYNAATLTVRYKGKTIADVLQMDFAEAAEFFESQPRISDPLKLLSETGL 1703 Query: 819 TYIRLGQSATTLSGGEAQRVKLARELSK------------RGTGQTLYILDEPTTGLHFA 866 Y+ LGQ++ TLSGGEAQR+KL EL K R LY+++EP+ GLH Sbjct: 1704 GYLTLGQASNTLSGGEAQRLKLVTELIKGRRVSRNALMKGRELPGDLYLIEEPSIGLHPR 1763 Query: 867 DIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAE 926 D++ L+DVLH+L DQGNT+VVIEHN +++ AD+++D+GP G GG I+ GTPE +A Sbjct: 1764 DVRLLIDVLHRLADQGNTVVVIEHNTEIMAEADYVIDMGPGPGDAGGTIVAEGTPEQIAG 1823 Query: 927 CEASHTARFLKPML 940 + S TA +++ L Sbjct: 1824 -KKSPTAEYIRREL 1836 Score = 297 bits (760), Expect = 1e-78, Method: Composition-based stats. Identities = 116/284 (40%), Positives = 170/284 (59%), Gaps = 4/284 (1%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 63 + +RGAR HNLKN++L +PR ++ V+TGLSGSGKSSLAFD +AEGQRR+++ +S YARQ Sbjct: 969 MALRGARHHNLKNVDLDVPRGEMTVLTGLSGSGKSSLAFDIFFAEGQRRFMDVMSPYARQ 1028 Query: 64 FLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCPDH 123 F +E PD+D + GL P ++IEQ + +STVGT+TEI ++RLL+A++G+ CP Sbjct: 1029 FTEQLESPDIDRLTGLPPTVAIEQNMSRGGTKSTVGTVTEIWQFMRLLYAKLGQAYCPQC 1088 Query: 124 DVPLAAQTVSQMVDNVL-SQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARIDGE 182 VP+ ++ S++V+ V + L LLAP+++ RKG + +GY +DG+ Sbjct: 1089 GVPVGKRSESEVVELVARELKKHGGLALLAPLVRGRKGHYADLARWAEGKGYEEMWVDGK 1148 Query: 183 VCDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVADMDDPKA 242 + LS L+ H +++VV R ++LA + ALE+ G V + Sbjct: 1149 LVPLSGFQPLDRYSSHDLDLVVAR-PEASWPPEKLAGAVHAALEMGEGFLQVLPPGSVRP 1207 Query: 243 EELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQ 286 E + AC CG S ELEP FSFN+P G CP C G G+ Sbjct: 1208 ELMG--TRLACASCGQSFPELEPYTFSFNSPRGWCPVCRGHGIV 1249 Score = 227 bits (578), Expect = 2e-57, Method: Composition-based stats. Identities = 120/417 (28%), Positives = 183/417 (43%), Gaps = 57/417 (13%) Query: 353 KENIEFKYMNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISN--------- 403 E + + GV + + ETE++ R F S Sbjct: 676 DEVVMVDQSPIVRTPRSTPAVYAGVFEEIRSLFAETETARARGMKPGFFSFNSGDGRCPR 735 Query: 404 ------------------RPCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNN 445 C C G+R E VY + + + M++ A+E F+ Sbjct: 736 CMGMGSEKVEMQFLSDIFVQCPLCHGSRYGSEVLSVYRDGRNIADVLGMTVAAALECFS- 794 Query: 446 LKLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGL 505 A + AK + I +L L VGL +LTL + TLSGGE QR++LA + + Sbjct: 795 ---AEKGAKASR-----IASKLGVLQRVGLGHLTLGQPLNTLSGGENQRLKLAKILLDQI 846 Query: 506 -----VGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDI 560 M +LDEP GLH D E LL L + G+T++V+EH+ + I++AD+VID+ Sbjct: 847 GSGANSSKMLILDEPGTGLHFADIEVLLAVFRELVEQGHTLLVIEHNPEFIKSADYVIDL 906 Query: 561 GPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSG----------KRKIEVPKKRVPANPE 610 GP G GG VVA G E I+A + TG+Y+ VP+ PE Sbjct: 907 GPEGGAGGGHVVATGTPEEIVAAGKGYTGKYLREVLEGNPSVYDPADAAVPESADMDIPE 966 Query: 611 KVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAEP 670 V+ L GAR +NLK+V L +P G T +TG+SGSGKS+L D F QR+ Sbjct: 967 GVMALRGARHHNLKNVDLDVPRGEMTVLTGLSGSGKSSLAFDIFFAEGQRRFMDVMSPYA 1026 Query: 671 APYRDIQGLEHFDKV------IDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPES 721 + + D++ + I+Q+ +S T T ++ +R L+A + ++ Sbjct: 1027 RQFTEQLESPDIDRLTGLPPTVAIEQNMSRGGTKSTVGTVTEIWQFMRLLYAKLGQA 1083 Score = 188 bits (478), Expect = 8e-46, Method: Composition-based stats. Identities = 89/262 (33%), Positives = 123/262 (46%), Gaps = 39/262 (14%) Query: 712 RELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVI--------------------KV 751 R A +S P FSFN G C C+G G++ Sbjct: 1213 RLACASCGQS-FPELEPYTFSFNSPRGWCPVCRGHGIVGRGKVKEDQAQSLLEAELKYDR 1271 Query: 752 EMHFLPDIY---VPCDQCKGKRYNRETLEIKYKGKTIHEVLDMTI--------------E 794 E+ D C C+G R N ++ +G T ++ + E Sbjct: 1272 ELARQADDDKGITTCPACRGVRLNEFARAVRLQGVTPGDIASLPAVAAAELVKGWQFERE 1331 Query: 795 EAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLY 854 EA D V + ++L L VGL Y+ L +SATTLSGGE QR++LA +L G LY Sbjct: 1332 EALIARDVVAEITQRLNFLQRVGLGYLSLDRSATTLSGGETQRIRLASQLGSHLRG-VLY 1390 Query: 855 ILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGE 914 +LDEPT GLH D + LL L +L+ +GNT++V+EH+ D ++ AD IVD+GP G GG Sbjct: 1391 VLDEPTIGLHPRDNELLLGTLDELKRRGNTLLVVEHDEDTMRRADHIVDMGPGAGIHGGR 1450 Query: 915 ILVSGTPETVAECEASHTARFL 936 I+ GT E +A S T L Sbjct: 1451 IMAQGTFEELAAMPDSVTGAAL 1472 Score = 162 bits (409), Expect = 8e-38, Method: Composition-based stats. Identities = 76/207 (36%), Positives = 106/207 (51%), Gaps = 28/207 (13%) Query: 403 NRPCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKE 462 PC +C G R V + + + M A EFF + Sbjct: 1645 YVPCETCRGKRYNAATLTVRYKGKTIADVLQMDFAEAAEFFES--------------QPR 1690 Query: 463 IGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQI-------------GAGLVGVM 509 I D LK L GL YLTL +++ TLSGGEAQR++L +++ G L G + Sbjct: 1691 ISDPLKLLSETGLGYLTLGQASNTLSGGEAQRLKLVTELIKGRRVSRNALMKGRELPGDL 1750 Query: 510 YVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGG 569 Y+++EPSIGLH RD L+ L L D GNTV+V+EH+ + + AD+VID+GPG G GG Sbjct: 1751 YLIEEPSIGLHPRDVRLLIDVLHRLADQGNTVVVIEHNTEIMAEADYVIDMGPGPGDAGG 1810 Query: 570 EVVAEGPLEAIMAVPESLTGQYMSGKR 596 +VAEG E I +S T +Y+ + Sbjct: 1811 TIVAEGTPEQIAG-KKSPTAEYIRREL 1836 Score = 85.4 bits (210), Expect = 1e-14, Method: Composition-based stats. Identities = 41/185 (22%), Positives = 67/185 (36%), Gaps = 25/185 (13%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 63 + V G HNLK +N+ IP+ +L V+TG+SG+GK+SL T+ ++ + L+ R+ Sbjct: 1497 LRVEGCCLHNLKGVNVAIPKGRLTVLTGVSGAGKTSLMTGTIRLAARQAIGDKLTREQRK 1556 Query: 64 FLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFAR--------- 114 D I ++Q PRST T D +R LFA+ Sbjct: 1557 LWKTSS--GFDSIR---MVYGVDQNPIGKTPRSTPATYVGFLDDIRTLFAQTADARRLGF 1611 Query: 115 --------VGEPRCPDHDVPLAAQTVSQMVDN---VLSQPEGKRLMLLAPIIKERKGEHT 163 G+ C + + GKR ++ + Sbjct: 1612 DRGRFSFNTGQGNCESCKGTGMQKLEMDFLPPCYVPCETCRGKRYNAATLTVRYKGKTIA 1671 Query: 164 KTLEN 168 L+ Sbjct: 1672 DVLQM 1676 Score = 74.6 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 35/119 (29%), Positives = 56/119 (47%), Gaps = 6/119 (5%) Query: 605 VPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNG 664 + + +++ GAR +NL++V + +P+G T +TG SGSGK++L TL+ QR+ Sbjct: 1 MSHCEDGRIRIRGAREHNLQNVDVDIPLGRLTVVTGPSGSGKTSLAMHTLYAEGQRRYME 60 Query: 665 ATIAEPAPYRDIQGLEHFDKV------IDIDQSPIGRTPRSNPATYTGVFTPVRELFAG 717 + D D V I + Q RT RS T TG+ + +FA Sbjct: 61 TFSPYVRQFMDRMDKPDVDAVENILPAIALHQRNSVRTSRSTVGTMTGLNDYWKFVFAR 119 >UniRef50_Q124L1 UvrA family protein n=23 Tax=cellular organisms RepID=Q124L1_POLSJ Length = 2024 Score = 925 bits (2390), Expect = 0.0, Method: Composition-based stats. Identities = 388/1045 (37%), Positives = 545/1045 (52%), Gaps = 129/1045 (12%) Query: 3 KIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYAR 62 I +RGAR HNLKN++L I +L VVTG SGSGKSSL FDTL+AEGQRRYVE+ SAYAR Sbjct: 15 TIRIRGARQHNLKNLDLDIRTGELTVVTGPSGSGKSSLVFDTLFAEGQRRYVETFSAYAR 74 Query: 63 QFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCPD 122 QFL M+KP VD +EG+ PAI+I+Q + + RSTVGT+TE++D+L+LL+AR + Sbjct: 75 QFLDRMDKPAVDKVEGVPPAIAIDQSNPVRSSRSTVGTMTELNDHLKLLYARSAQLFDKQ 134 Query: 123 HDVPLAAQTVSQMVDNVLSQ------------------------------------PEGK 146 + + + ++++ G Sbjct: 135 TAQLVRHDSPESIYAGLMARTAAVEQAQLSAAPPQRELAPLHDERGSATPEAREATSVGV 194 Query: 147 RLMLLAPIIKERKGEHTKTLENLASQGYIRARIDGEVCDLSDPPKLELQKKHTIEVVVDR 206 RL++ P+ + + L++ G+ R + ++ + P KL ++VV DR Sbjct: 195 RLVMTFPVELPGNTSAEEVTQWLSASGFTRVHAERQISTPAGPHKL-------LDVVADR 247 Query: 207 FKVRDDLTQRLAESFETALELSGGTAVVADMDDPKA--------EELLFSANFACPICGY 258 F+++ R E+ E AL+ GG V M A E FS CP Sbjct: 248 FRIQTTEKVRAIEAIEMALKRGGGRLNVYVMGAGPASPSSATPEEMWRFSTGLHCPDSDT 307 Query: 259 SMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPELSLAGGAIRGWDRRNFYYF 318 + P LFSFN+ GAC TC G G D VI N +L+L GAI+ + Sbjct: 308 RYTDPTPSLFSFNSAMGACETCRGFGRVIGVDYGLVIPNDKLTLRAGAIKVMQTPAWQEA 367 Query: 319 QM-LKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKENIEFKYMNDRGDTSIRRHPFEGV 377 Q L A+ + PW L+ V+ GS N ++ + G+ Sbjct: 368 QDDLMRHAETAGIPRDTPWYKLTPEQQAWVINGSPSWNGKW------------NQHWFGI 415 Query: 378 LHNMERRYKETESSAVREELAKFISNRPCASCEGTRLRREARHVYVE------------- 424 + +R L+K+ S C +C G RL+ E+ + Sbjct: 416 KRFFAYLESKAYKMHIRVLLSKYRSYTQCETCGGARLKLESLLWRLGSKEAADAVLPPGQ 475 Query: 425 ------------------NTPLPAISDMSIGHAMEFFNNLKLAGQ----RAKIAEKILKE 462 L + + I +FF +L LA + K + + +E Sbjct: 476 RFMPVGVQWSRQQLEALPGLCLHDLMRLPIDRLQKFFASLSLAAEGDDAEQKALKLLFEE 535 Query: 463 IGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQR 522 I R+K+L +VG+ YLTL R + TLSGGE QRI L + +G LV ++VLDEPSIGLH R Sbjct: 536 IQTRVKYLCDVGIGYLTLDRQSRTLSGGEVQRINLTTALGTSLVNTLFVLDEPSIGLHPR 595 Query: 523 DNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMA 582 D R+ + LRD GNT++VVEHD + AAD +ID+GPG G GG++V +G E + Sbjct: 596 DMNRITQAMHRLRDAGNTLVVVEHDPAVMLAADRMIDMGPGPGEKGGQIVFDGTPED-LR 654 Query: 583 VPESLTGQYMSGKRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVS 642 ++LTG Y+ ++++ + KR ++ L L GAR +NLK++T+ P+ C+TGVS Sbjct: 655 HADTLTGAYLGSRKRVGLGLKRAVSDNTPRLILEGARDHNLKNLTVEFPLQRLVCVTGVS 714 Query: 643 GSGKSTLINDTLFPIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPA 702 GSGKSTL+ D L P RQ G P + + G +H V+ +DQSPIG+T RSNPA Sbjct: 715 GSGKSTLMQDILAPALLRQF-GKATETPGLHDRLMGADHLTDVVFVDQSPIGKTARSNPA 773 Query: 703 TYTGVFTPVRELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVP 762 +Y G + VRELFA P +R R YT +FSFN GRC C G G VEM FL D+Y+ Sbjct: 774 SYVGAWDAVRELFAQSPLARQRSYTATKFSFNNGDGRCPTCGGSGFEHVEMQFLSDVYLR 833 Query: 763 CDQCKGKRYNRETLEIKYKGK----------TIHEVLDMTIEEAREFFDAVPALARKLQT 812 C C GKRY E LE+ + K + +VL++T+ EA + F + R LQ Sbjct: 834 CPDCDGKRYRPEILEVTIERKAIGQLKPVLMNVSDVLELTVSEAVQLFAQDREVLRALQP 893 Query: 813 LMDVGLTYIRLGQSATTLSGGEAQRVKLARELS------------------KRGTGQTLY 854 ++DVGL Y++LGQ TLSGGEAQR+KLA L+ K TL+ Sbjct: 894 IVDVGLEYVKLGQPVPTLSGGEAQRLKLAGFLAEASRTASKSSASKQALALKHPGRGTLF 953 Query: 855 ILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGE 914 + DEPTTGLHF DI +L+ L KL D G++++VIEHNLDVI++ADW++DLGPEGG GGG Sbjct: 954 LFDEPTTGLHFDDIAKLMRALRKLMDAGHSLIVIEHNLDVIRSADWLIDLGPEGGEGGGL 1013 Query: 915 ILVSGTPETVAECEASHTARFLKPM 939 ++ GTPE V + SHTA+ L+ Sbjct: 1014 LVAQGTPEEVRQHPTSHTAKALREY 1038 Score = 453 bits (1166), Expect = e-125, Method: Composition-based stats. Identities = 213/608 (35%), Positives = 304/608 (50%), Gaps = 69/608 (11%) Query: 2 DKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYA 61 + I++ A+ +NLK++++ IPR K VVTG+SGSGKS+LAFD L+ EGQRRY+ESL+AYA Sbjct: 1064 NLIQIVNAKENNLKSLSVDIPRGKFNVVTGVSGSGKSTLAFDILFNEGQRRYLESLNAYA 1123 Query: 62 RQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCP 121 R + +P+VD + G+ P ++IEQ+ + +STVGT TE+ +LRLL+ ++G C Sbjct: 1124 RSIVQPAGRPEVDAVYGIPPTVAIEQRLSRGGRKSTVGTTTEVWHFLRLLYVKLGVQHCT 1183 Query: 122 DHDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARIDG 181 + Q+ + +L G+ + LLAP++ RKG +T+ + +GY RIDG Sbjct: 1184 KDGAAVMPQSPESIAAQLLKTYRGQHIGLLAPLVIARKGVYTELADWARPRGYTHLRIDG 1243 Query: 182 EVCDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVADMDDPK 241 E + P+++ K+HT+E+ V V + L + TALE G V D Sbjct: 1244 EFLPTTGFPRIDRFKEHTVELPVADIHVTPENEAALRVALATALEHGKGVVHVLAPLDG- 1302 Query: 242 AEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPELS 301 + LE + ACP C DP Sbjct: 1303 -----LRGAMMAGASTKGLGRLEA-----FSTKRACPVCSTS--YPELDPRL-------- 1342 Query: 302 LAGGAIRGWDRRNFYYFQMLKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKENIEFKYM 361 + + GW LS KV ++ + + Sbjct: 1343 FSYNSKHGWCPD-----------CVGTGV-------KLSKEQRKVFDDSVRDDDNKGREQ 1384 Query: 362 NDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGTRLRREARHV 421 + + C +CEGTRL ++AR V Sbjct: 1385 TFGEPEVDD------------------------------VVDAACPTCEGTRLNKQARAV 1414 Query: 422 YVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTLS 481 + I+ +S+ + L LAG+ A IA ++ EI RL+FL +VGL YLTL Sbjct: 1415 KFAGVGIADIAGLSVTDVRRWVEKLALAGREAGIARDLVPEIKSRLEFLEDVGLGYLTLD 1474 Query: 482 RSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTV 541 R A TLSGGEAQRIRLA+Q+G+ L GV YVLDEP+IGLH RDN+ LL L L D GNT+ Sbjct: 1475 RGAPTLSGGEAQRIRLAAQLGSNLQGVCYVLDEPTIGLHPRDNQILLSALGKLSDRGNTL 1534 Query: 542 IVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEVP 601 +VVEHDED IR AD++IDIGPGAG GG++VA+G + AVPESLTG+Y++ + Sbjct: 1535 VVVEHDEDTIRRADNIIDIGPGAGKRGGQLVAQGTAAQLSAVPESLTGRYLAHPLIHPLH 1594 Query: 602 KKRVPANP 609 +R P Sbjct: 1595 ARRETEKP 1602 Score = 357 bits (917), Expect = 1e-96, Method: Composition-based stats. Identities = 159/355 (44%), Positives = 223/355 (62%), Gaps = 22/355 (6%) Query: 607 ANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLF----------- 655 + L + A +NLK V++ +P+ +TGVSGSGKSTL D L Sbjct: 1668 SKFTSWLTVVNAGLHNLKSVSVDVPLYRLVAVTGVSGSGKSTLARDVLLTNVHAGVMLRS 1727 Query: 656 -PIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVREL 714 + + + A I+G D+V+++DQ+PIG+TPRS PATY G + +R+L Sbjct: 1728 TKAGRDADDKGKTPDWAGCERIEGYAAVDRVLEVDQTPIGKTPRSCPATYIGFWDTIRKL 1787 Query: 715 FAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRE 774 FA E+RARGY GRFSFN GRC C+G GV + M FLPD+ V C+ C G R+N E Sbjct: 1788 FADTLEARARGYGAGRFSFNTGEGRCPTCEGAGVRTIGMSFLPDVKVLCETCHGARFNPE 1847 Query: 775 TLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGE 834 T + ++GK+I +VL M ++EA FF ++P++A LQ L DVGL Y+ LGQ + TLSGGE Sbjct: 1848 TQAVTWRGKSIGDVLKMEVDEAVAFFASMPSIAHPLQLLKDVGLGYLTLGQPSPTLSGGE 1907 Query: 835 AQRVKLARELSK---------RGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTI 885 AQR+KL ELSK + TLY+LDEPT GLH AD+++L+ VLH+L + G+++ Sbjct: 1908 AQRIKLVTELSKVRDDITRRGQKAPHTLYVLDEPTVGLHMADVEKLIHVLHRLVNGGHSV 1967 Query: 886 VVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLKPML 940 VVIEH+LDV+ ADW++DLGP+GG GG+++ S PE V + +HT L+ +L Sbjct: 1968 VVIEHDLDVVAEADWVIDLGPDGGDAGGQVVASAPPEAVVKL-GTHTGNALQSVL 2021 Score = 205 bits (523), Expect = 5e-51, Method: Composition-based stats. Identities = 104/348 (29%), Positives = 160/348 (45%), Gaps = 39/348 (11%) Query: 403 NRPCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKE 462 C C+G R R E V +E + + + M + L+L A +E Sbjct: 831 YLRCPDCDGKRYRPEILEVTIERKAIGQLKPV----LMNVSDVLELTVSEAVQLFAQDRE 886 Query: 463 IGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIG-------------------A 503 + L+ +V+VGL Y+ L + TLSGGEAQR++LA + Sbjct: 887 VLRALQPIVDVGLEYVKLGQPVPTLSGGEAQRLKLAGFLAEASRTASKSSASKQALALKH 946 Query: 504 GLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPG 563 G +++ DEP+ GLH D +L+ L L D G+++IV+EH+ D IR+AD +ID+GP Sbjct: 947 PGRGTLFLFDEPTTGLHFDDIAKLMRALRKLMDAGHSLIVIEHNLDVIRSADWLIDLGPE 1006 Query: 564 AGVHGGEVVAEGPLEAIMAVPESLTGQYMS----------GKRKIEVPKKRVPANPEKVL 613 G GG +VA+G E + P S T + + G ++ ++ Sbjct: 1007 GGEGGGLLVAQGTPEEVRQHPTSHTAKALREYELAMGQVHGVEEVRPKAWTTRPAFSNLI 1066 Query: 614 KLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAEPAPY 673 ++ A+ NNLK +++ +P G F +TGVSGSGKSTL D LF QR+ + A Sbjct: 1067 QIVNAKENNLKSLSVDIPRGKFNVVTGVSGSGKSTLAFDILFNEGQRRYLESLNAYARSI 1126 Query: 674 RDIQGLEHFDKV------IDIDQSPIGRTPRSNPATYTGVFTPVRELF 715 G D V + I+Q +S T T V+ +R L+ Sbjct: 1127 VQPAGRPEVDAVYGIPPTVAIEQRLSRGGRKSTVGTTTEVWHFLRLLY 1174 Score = 195 bits (495), Expect = 8e-48, Method: Composition-based stats. Identities = 86/256 (33%), Positives = 125/256 (48%), Gaps = 39/256 (15%) Query: 723 ARGYTPGRFSFNVRGGRCEACQGDGVI-------KVEMHFLPD----------------- 758 P FS+N + G C C G GV + D Sbjct: 1335 YPELDPRLFSYNSKHGWCPDCVGTGVKLSKEQRKVFDDSVRDDDNKGREQTFGEPEVDDV 1394 Query: 759 IYVPCDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDA--------------VP 804 + C C+G R N++ +K+ G I ++ +++ + R + + VP Sbjct: 1395 VDAACPTCEGTRLNKQARAVKFAGVGIADIAGLSVTDVRRWVEKLALAGREAGIARDLVP 1454 Query: 805 ALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLH 864 + +L+ L DVGL Y+ L + A TLSGGEAQR++LA +L G Y+LDEPT GLH Sbjct: 1455 EIKSRLEFLEDVGLGYLTLDRGAPTLSGGEAQRIRLAAQLGSNLQG-VCYVLDEPTIGLH 1513 Query: 865 FADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETV 924 D Q LL L KL D+GNT+VV+EH+ D I+ AD I+D+GP G GG+++ GT + Sbjct: 1514 PRDNQILLSALGKLSDRGNTLVVVEHDEDTIRRADNIIDIGPGAGKRGGQLVAQGTAAQL 1573 Query: 925 AECEASHTARFLKPML 940 + S T R+L L Sbjct: 1574 SAVPESLTGRYLAHPL 1589 Score = 161 bits (408), Expect = 1e-37, Method: Composition-based stats. Identities = 69/191 (36%), Positives = 101/191 (52%), Gaps = 24/191 (12%) Query: 406 CASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGD 465 C +C G R E + V + + M + A+ FF ++ I Sbjct: 1836 CETCHGARFNPETQAVTWRGKSIGDVLKMEVDEAVAFFASMP--------------SIAH 1881 Query: 466 RLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQI----------GAGLVGVMYVLDEP 515 L+ L +VGL YLTL + + TLSGGEAQRI+L +++ G +YVLDEP Sbjct: 1882 PLQLLKDVGLGYLTLGQPSPTLSGGEAQRIKLVTELSKVRDDITRRGQKAPHTLYVLDEP 1941 Query: 516 SIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEG 575 ++GLH D E+L+ L L + G++V+V+EHD D + AD VID+GP G GG+VVA Sbjct: 1942 TVGLHMADVEKLIHVLHRLVNGGHSVVVIEHDLDVVAEADWVIDLGPDGGDAGGQVVASA 2001 Query: 576 PLEAIMAVPES 586 P EA++ + Sbjct: 2002 PPEAVVKLGTH 2012 Score = 86.6 bits (213), Expect = 5e-15, Method: Composition-based stats. Identities = 45/171 (26%), Positives = 66/171 (38%), Gaps = 26/171 (15%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 63 + V A HNLK++++ +P +L+ VTG+SGSGKS+LA D L + + R Sbjct: 1674 LTVVNAGLHNLKSVSVDVPLYRLVAVTGVSGSGKSTLARDVLLTNVHAGVMLRSTKAGRD 1733 Query: 64 FLSLMEKPD---VDHIEGLSP---AISIEQKSTSHNPRSTVGTITEIHDYLRLLFA---- 113 + PD + IEG + + ++Q PRS T D +R LFA Sbjct: 1734 ADDKGKTPDWAGCERIEGYAAVDRVLEVDQTPIGKTPRSCPATYIGFWDTIRKLFADTLE 1793 Query: 114 -------------RVGEPRCPDHDVPLAAQTVSQM---VDNVLSQPEGKRL 148 GE RCP + V + G R Sbjct: 1794 ARARGYGAGRFSFNTGEGRCPTCEGAGVRTIGMSFLPDVKVLCETCHGARF 1844 Score = 83.9 bits (206), Expect = 3e-14, Method: Composition-based stats. Identities = 43/124 (34%), Positives = 64/124 (51%), Gaps = 6/124 (4%) Query: 603 KRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQL 662 ++ PA + +++ GAR +NLK++ L + G T +TG SGSGKS+L+ DTLF QR+ Sbjct: 6 RKDPAMSQGTIRIRGARQHNLKNLDLDIRTGELTVVTGPSGSGKSSLVFDTLFAEGQRRY 65 Query: 663 NGATIAEPAPYRDIQGLEHFDKV------IDIDQSPIGRTPRSNPATYTGVFTPVRELFA 716 A + D DKV I IDQS R+ RS T T + ++ L+A Sbjct: 66 VETFSAYARQFLDRMDKPAVDKVEGVPPAIAIDQSNPVRSSRSTVGTMTELNDHLKLLYA 125 Query: 717 GVPE 720 + Sbjct: 126 RSAQ 129 >UniRef50_B8GRH5 Excinuclease ABC, A subunit n=10 Tax=Bacteria RepID=B8GRH5_THISH Length = 1889 Score = 922 bits (2383), Expect = 0.0, Method: Composition-based stats. Identities = 401/1008 (39%), Positives = 544/1008 (53%), Gaps = 102/1008 (10%) Query: 2 DKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYA 61 D+I + GAR +NLK ++L +P ++LIVVTG+SGSGKSSLAFDT+YAEGQRRYVE+ S YA Sbjct: 4 DRIRIFGARQNNLKGLDLELPLNELIVVTGVSGSGKSSLAFDTVYAEGQRRYVETFSPYA 63 Query: 62 RQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCP 121 RQFL M+KP VD IEG+ PAI+I+Q + RSTVGT+TE++D+L+LL+AR C Sbjct: 64 RQFLDRMDKPAVDRIEGVLPAIAIDQTNPVRTSRSTVGTMTELNDHLKLLYARAAHLHCR 123 Query: 122 DHDVPLAAQTVSQMVDNVLSQPE--GKRLMLLAPIIKERKGEHTKTLENLASQGYIRARI 179 + T + + L + G R+M++ P+ + +L +QGY R Sbjct: 124 GCGTRVRCDTPEAIANEWLERAHRDGTRVMVVFPVPVPENFSLEEVKGHLKAQGYER--F 181 Query: 180 DGEVCDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVADM-- 237 GE +EV+ DR +V RL E+ ETAL G V + Sbjct: 182 HGET-------------DQRLEVIQDRLRVEPGNRGRLVEALETALHHGQGRVRVYPLGE 228 Query: 238 DDPKAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQN 297 D + +SA+ C C E P FSFN+P GAC C G G D D VI + Sbjct: 229 DREALAPVDYSADLHCAACDLHYSETTPNHFSFNSPIGACEACRGFGRTMGIDLDLVIPD 288 Query: 298 PELSLAGGAIRGWDRRNFYYFQ-MLKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKENI 356 +SL GA++ W +Y Q LK+ A ++ PW LS + V+ G G Sbjct: 289 GRVSLGEGAVKPWQTDAYYECQAELKTFARKRGVPLDLPWDELSDDQKAWVIEGEGD--- 345 Query: 357 EFKYMNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGTRLRR 416 + G+ + ++ +R L+++ S PC +C+G RL+ Sbjct: 346 ------------FDDGLWYGIRRFFDWLETKSYKMHIRVLLSRYRSYEPCKACQGARLKP 393 Query: 417 EARHVYVE-------------------------------NTPLPAISDMSIGHAMEFFNN 445 ++ + L + + + FF+ Sbjct: 394 DSLLWRLGTQADADGVLEPGARFLPAGISWSRDLLETLPGLCLHDLMQVPLARCKAFFDQ 453 Query: 446 LKLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGL 505 L L + + +L EI RL +L VGL YLTL R + TLSGGE QRI L + +G L Sbjct: 454 LHLPAPLDEATDLLLAEIRARLNYLCEVGLGYLTLDRQSRTLSGGEVQRINLTTALGTSL 513 Query: 506 VGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAG 565 V ++VLDEPSIGLH RD +R++G L LRD GN+++VVEHD +RAAD ++D+GPG G Sbjct: 514 VNTLFVLDEPSIGLHPRDMDRVVGVLRRLRDAGNSLLVVEHDPQVMRAADRILDMGPGPG 573 Query: 566 VHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEVP-KKRVPANPEKVLKLTGARGNNLK 624 GGEVV G I+ +SLTGQY+SG++++ +P R P L+L GA +NLK Sbjct: 574 ERGGEVVFFGTPAQILRSRQSLTGQYLSGRKQVALPSASRPPDGDTVWLELRGAAQHNLK 633 Query: 625 DVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAEPAPYRDIQGLEHFDK 684 + P+G C+TGVSGSGKSTLI D L+P + L G + + G E D Sbjct: 634 GIDARFPLGRLVCVTGVSGSGKSTLIQDLLYPALAK-LKGRPEYPAGAFGSLIGHESLDA 692 Query: 685 VIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESRARGYTPGRFSFNVRGGRCEACQ 744 V+ +DQSPIGRT RS PA+Y G F +R+LFA P ++ RGYT G FSFN GRC C Sbjct: 693 VVMVDQSPIGRTARSCPASYVGAFDAIRKLFAEEPLAKERGYTAGTFSFNSGNGRCPVCT 752 Query: 745 GDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKYKGK-----TIHEVLDMTIEEAREF 799 G G VEM FL D+Y+ C +C G+RY E L++K G + VL MT+ EA F Sbjct: 753 GSGFEHVEMQFLSDVYLRCGECDGRRYRPEVLQVKALGAEGHAADLSGVLGMTVTEALAF 812 Query: 800 FDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRG----------- 848 F VP + + L+ L VGL Y+RLGQ TLSGGEAQR+KLA L + Sbjct: 813 FAHVPEVQQSLEPLAAVGLEYLRLGQPVPTLSGGEAQRLKLAGHLVQHAGRNVGRASARH 872 Query: 849 ------------------TGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEH 890 G TL++LDEPTTGLHF DI +LL L +L+ QG++++VIEH Sbjct: 873 AAASTGTASRAEARPTGERGGTLFLLDEPTTGLHFEDIARLLKALRRLQAQGHSLIVIEH 932 Query: 891 NLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLKP 938 NLDVI+ ADW++DLGPEGG GGGEI+ GTP V + SHT L+ Sbjct: 933 NLDVIRAADWLIDLGPEGGDGGGEIVCEGTPAQVMKHPGSHTGAALRA 980 Score = 580 bits (1496), Expect = e-164, Method: Composition-based stats. Identities = 277/600 (46%), Positives = 375/600 (62%), Gaps = 41/600 (6%) Query: 381 MERRYKETESSAVREELAKFISNRPCASCEGTRLRREARHVYVENTPLPAISDMSIGHAM 440 + + + E S E L S + C +C G RLR EA V + +S + + A Sbjct: 1285 VLKGFDEAHSGEEGEWLEAGESRQTCPACHGQRLRPEALAVRFRERSIGELSALPVKAAR 1344 Query: 441 EFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQ 500 +F LK + + IA IL EI RL FL VGL YL+L R A TLSGGEAQRIRLA+Q Sbjct: 1345 AWFEKLKPKARESAIARDILPEIRGRLAFLEQVGLGYLSLDRGAPTLSGGEAQRIRLAAQ 1404 Query: 501 IGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDI 560 +G L GV Y+LDEP+IGLH RDN LL TL L+ GNTV+VVEHDED IR+A+HVID+ Sbjct: 1405 LGTNLQGVCYILDEPTIGLHPRDNRMLLDTLHRLQAKGNTVVVVEHDEDTIRSAEHVIDL 1464 Query: 561 GPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEVPKKRV-PANPEKVLKLTGAR 619 GPGAG GG +VA+G ++ +M PESLTG++++ + + +R A L + GA Sbjct: 1465 GPGAGERGGRLVAQGSVKQVMKAPESLTGRFLAHPLRHPLVARRPTKAGQAPALSIEGAC 1524 Query: 620 GNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGA-TIAEPAPYRDIQG 678 NNL++V +++P+ C+TGVSGSGKSTL+ + L+ ++ D++G Sbjct: 1525 LNNLRNVAVSIPLNRLVCVTGVSGSGKSTLVREVLYRNLAERVGKRGRKPALTGCADLEG 1584 Query: 679 LEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESRARGYTPGRFSFNVRGG 738 + ++V+++DQ+PIGRTPRS PATY GVF +R+L+A PE+R RG+ RFSFN GG Sbjct: 1585 WQDLERVLEVDQTPIGRTPRSCPATYVGVFDRIRKLYAETPEARLRGWNASRFSFNTPGG 1644 Query: 739 RCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEARE 798 RC C+G GV ++EM FLPD+ VPC+ C G RY RETLE ++K ++I +VL+M+++EA Sbjct: 1645 RCAVCEGQGVRRIEMSFLPDVVVPCEACGGGRYGRETLEARFKDRSIADVLNMSVDEAVP 1704 Query: 799 FFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLAREL-------------- 844 FF A PA+ LQ L DVGL Y+RLGQ + TLSGGEAQR+KL EL Sbjct: 1705 FFTAHPAIHHALQLLQDVGLGYLRLGQPSPTLSGGEAQRMKLVTELSRSGKTFANTVGRA 1764 Query: 845 ----------------SKRGTGQ--------TLYILDEPTTGLHFADIQQLLDVLHKLRD 880 ++ +LYILDEPT GLH AD+++L+ VLH+L + Sbjct: 1765 SARQPEAWTGIASRAEARPTARPSGQARSRGSLYILDEPTVGLHMADVEKLIRVLHRLVE 1824 Query: 881 QGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLKPML 940 G++++VIEHNLDVI ADWI+D+GPEGG GGG + GTPE++ + SHT R L L Sbjct: 1825 AGHSVIVIEHNLDVIAEADWIIDMGPEGGDGGGRVAGQGTPESMVRRK-SHTGRMLGAFL 1883 Score = 300 bits (768), Expect = 2e-79, Method: Composition-based stats. Identities = 117/291 (40%), Positives = 175/291 (60%), Gaps = 3/291 (1%) Query: 3 KIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYAR 62 +I + AR HNLK +++ +PRD+ V+TG+SGSGKS++AFD L+ EGQRRY+ESL+AYAR Sbjct: 1004 EIRISNAREHNLKGVDIQVPRDRFTVITGVSGSGKSTVAFDILFNEGQRRYLESLNAYAR 1063 Query: 63 QFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCPD 122 + +P+VD + G+ P ++IEQ+++ +STVGT+TE+H +LRLL+ ++G CPD Sbjct: 1064 SLVQPASRPEVDAVTGIPPTVAIEQRTSRGGHKSTVGTLTEVHHFLRLLYVKLGTQYCPD 1123 Query: 123 HDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARIDGE 182 DVP+ QT ++ +L Q + + + +LAP++ RKG +T ++G+ R+DGE Sbjct: 1124 CDVPIEPQTPEAILAALLKQWKSREVHVLAPLVSARKGYYTDLARWAHNRGFAHLRVDGE 1183 Query: 183 VCDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVADMDDPKA 242 + P+L+ ++H IE+ V KV L E+ L+L G VA + Sbjct: 1184 LIPTDPWPRLDRYREHDIELPVASLKVTPKAEAALREAIARGLDLGKGMIRVAPLSGRA- 1242 Query: 243 EELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQ-YFDPD 292 E L+S ACP C S +PRLFS+N G C TC G GV FD Sbjct: 1243 -EKLYSTERACPSCARSFDVPDPRLFSYNARHGWCRTCFGTGVVLKGFDEA 1292 Score = 205 bits (521), Expect = 8e-51, Method: Composition-based stats. Identities = 88/239 (36%), Positives = 129/239 (53%), Gaps = 26/239 (10%) Query: 727 TPGRFSFNVRGGRCEACQGDGVI-----------KVEMHFLPDIYVPCDQCKGKRYNRET 775 P FS+N R G C C G GV+ + E + C C G+R E Sbjct: 1263 DPRLFSYNARHGWCRTCFGTGVVLKGFDEAHSGEEGEWLEAGESRQTCPACHGQRLRPEA 1322 Query: 776 LEIKYKGKTIHEVLDMTIEEAREFFDAVPALAR--------------KLQTLMDVGLTYI 821 L ++++ ++I E+ + ++ AR +F+ + AR +L L VGL Y+ Sbjct: 1323 LAVRFRERSIGELSALPVKAARAWFEKLKPKARESAIARDILPEIRGRLAFLEQVGLGYL 1382 Query: 822 RLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQ 881 L + A TLSGGEAQR++LA +L G YILDEPT GLH D + LLD LH+L+ + Sbjct: 1383 SLDRGAPTLSGGEAQRIRLAAQLGTNLQG-VCYILDEPTIGLHPRDNRMLLDTLHRLQAK 1441 Query: 882 GNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLKPML 940 GNT+VV+EH+ D I++A+ ++DLGP G GG ++ G+ + V + S T RFL L Sbjct: 1442 GNTVVVVEHDEDTIRSAEHVIDLGPGAGERGGRLVAQGSVKQVMKAPESLTGRFLAHPL 1500 Score = 195 bits (496), Expect = 6e-48, Method: Composition-based stats. Identities = 108/360 (30%), Positives = 161/360 (44%), Gaps = 61/360 (16%) Query: 403 NRPCASCEGTRLRREARHVYVENT-----PLPAISDMSIGHAMEFFNNLKLAGQRAKIAE 457 C C+G R R E V L + M++ A+ FF ++ Sbjct: 768 YLRCGECDGRRYRPEVLQVKALGAEGHAADLSGVLGMTVTEALAFFAHVP---------- 817 Query: 458 KILKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGA-------------- 503 E+ L+ L VGL YL L + TLSGGEAQR++LA + Sbjct: 818 ----EVQQSLEPLAAVGLEYLRLGQPVPTLSGGEAQRLKLAGHLVQHAGRNVGRASARHA 873 Query: 504 ----------------GLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHD 547 G +++LDEP+ GLH D RLL L L+ G+++IV+EH+ Sbjct: 874 AASTGTASRAEARPTGERGGTLFLLDEPTTGLHFEDIARLLKALRRLQAQGHSLIVIEHN 933 Query: 548 EDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEVPK----- 602 D IRAAD +ID+GP G GGE+V EG +M P S TG + + + + Sbjct: 934 LDVIRAADWLIDLGPEGGDGGGEIVCEGTPAQVMKHPGSHTGAALRAEAAGSIAESSAAS 993 Query: 603 -KRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQ 661 ++ ++++ AR +NLK V + +P FT ITGVSGSGKST+ D LF QR+ Sbjct: 994 YRKAAKTVRAEIRISNAREHNLKGVDIQVPRDRFTVITGVSGSGKSTVAFDILFNEGQRR 1053 Query: 662 L------NGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELF 715 ++ +PA ++ + + I+Q +S T T V +R L+ Sbjct: 1054 YLESLNAYARSLVQPASRPEVDAVTGIPPTVAIEQRTSRGGHKSTVGTLTEVHHFLRLLY 1113 Score = 140 bits (354), Expect = 2e-31, Method: Composition-based stats. Identities = 77/308 (25%), Positives = 121/308 (39%), Gaps = 81/308 (26%) Query: 353 KENIEFKYMNDRGDTSIRRHPFEGVLHNMERRYKET------------------------ 388 + +E + GV + + Y ET Sbjct: 1589 ERVLEVDQTPIGRTPRSCPATYVGVFDRIRKLYAETPEARLRGWNASRFSFNTPGGRCAV 1648 Query: 389 -ESSAVREELAKFI--SNRPCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNN 445 E VR F+ PC +C G R RE ++ + + +MS+ A+ FF Sbjct: 1649 CEGQGVRRIEMSFLPDVVVPCEACGGGRYGRETLEARFKDRSIADVLNMSVDEAVPFF-- 1706 Query: 446 LKLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQI---- 501 I L+ L +VGL YL L + + TLSGGEAQR++L +++ Sbjct: 1707 ------------TAHPAIHHALQLLQDVGLGYLRLGQPSPTLSGGEAQRMKLVTELSRSG 1754 Query: 502 ---------GAGLVGV--------------------------MYVLDEPSIGLHQRDNER 526 + +Y+LDEP++GLH D E+ Sbjct: 1755 KTFANTVGRASARQPEAWTGIASRAEARPTARPSGQARSRGSLYILDEPTVGLHMADVEK 1814 Query: 527 LLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPES 586 L+ L L + G++VIV+EH+ D I AD +ID+GP G GG V +G E+++ +S Sbjct: 1815 LIRVLHRLVEAGHSVIVIEHNLDVIAEADWIIDMGPEGGDGGGRVAGQGTPESMVRR-KS 1873 Query: 587 LTGQYMSG 594 TG+ + Sbjct: 1874 HTGRMLGA 1881 Score = 82.3 bits (202), Expect = 8e-14, Method: Composition-based stats. Identities = 37/123 (30%), Positives = 62/123 (50%), Gaps = 5/123 (4%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 63 + + GA +NL+N+ + IP ++L+ VTG+SGSGKS+L + LY R E + R+ Sbjct: 1518 LSIEGACLNNLRNVAVSIPLNRLVCVTGVSGSGKSTLVREVLY----RNLAERVGKRGRK 1573 Query: 64 FLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCPDH 123 +L D++ + L + ++Q PRS T + D +R L+A E R Sbjct: 1574 P-ALTGCADLEGWQDLERVLEVDQTPIGRTPRSCPATYVGVFDRIRKLYAETPEARLRGW 1632 Query: 124 DVP 126 + Sbjct: 1633 NAS 1635 >UniRef50_B5YG61 Excinuclease ABC, A subunit n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YG61_THEYD Length = 915 Score = 920 bits (2379), Expect = 0.0, Method: Composition-based stats. Identities = 370/946 (39%), Positives = 555/946 (58%), Gaps = 47/946 (4%) Query: 2 DKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYA 61 D + ++GAR +NLKNI+++IP +KL V+TG+SGSGKSSLAFDT+YAEGQ R++E +S+YA Sbjct: 8 DYLIIKGARQNNLKNIDVIIPHNKLTVITGISGSGKSSLAFDTIYAEGQWRFIECMSSYA 67 Query: 62 RQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCP 121 R F+ + +PDVD I+ L P I++EQ++ R+TVGT TEI+DYLR++F++V +P CP Sbjct: 68 RVFIEKLPRPDVDLIDNLRPTIALEQRNPIKGSRATVGTHTEIYDYLRIIFSKVAKPVCP 127 Query: 122 DHDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARIDG 181 + + + S++ +L + GKR ++ E ++ E L G+ R I Sbjct: 128 KCNEEIKSWNSSKLTQELLEKYAGKRAFIVF--------ETDESKEKLIQLGFSRVLIFE 179 Query: 182 EVCDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVADMDDPK 241 + L + V+VDR + RL +S E A + + + Sbjct: 180 NNNPIVKE--LTKSDEKLKMVIVDRLVLS--NASRLNDSLEIAFRMGQVKIYIVE----D 231 Query: 242 AEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPELS 301 A L F + CP CG E P LFSFN+P GACP C G G +D ++ + ELS Sbjct: 232 ANLLHFFSEPICPYCGMKTSEPSPLLFSFNHPHGACPQCKGFGYLLKYDESIIVPDKELS 291 Query: 302 LAGGAIRGWDRRN-FYYFQMLKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKENIEFKY 360 LA GAI W++ ++ Q L A +V P+ LS ++ G Sbjct: 292 LAEGAIEIWEKPTLKWWKQQLLKGAKLSGINVNIPYRMLSQEQKNLIFTG---------- 341 Query: 361 MNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGTRLRREARH 420 F GV +E K+ VR L++ C C+G RL+ A Sbjct: 342 ----------NQYFYGVNDFLEELEKKRYKVHVRVFLSRIRKPVVCPHCKGKRLKDTALM 391 Query: 421 VYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTL 480 + + I+ MSI E+ +LKL+ + AKI+E+ L++I ++L+FL VGL+YLTL Sbjct: 392 FKINGLDIGDINFMSISQLKEWIQSLKLSQEEAKISEEPLRQISEKLEFLERVGLSYLTL 451 Query: 481 SRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNT 540 R +TLSGGE QR+ +++Q+ L +YVLDEP++GLH +D +R++ L L + GNT Sbjct: 452 DRQIKTLSGGEYQRLNISNQLSNRLTATLYVLDEPTVGLHPKDTDRIIAVLKDLTEYGNT 511 Query: 541 VIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEV 600 V+VVEHD+D I+ AD +I++GPG G GGEVV G L+ + + +++T Y+ + + Sbjct: 512 VVVVEHDKDVIKNADWLIELGPGGGSLGGEVVYSGELKKFLNL-DTVTANYLKKSECLAI 570 Query: 601 PKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQR 660 K + + L A G+NLK++T+ P+ T +TG+SGSGKS+L+ DT + Sbjct: 571 --KNYKNLFKNFITLKNAHGHNLKNITVHFPMNALTVVTGISGSGKSSLVVDTFYKAVAN 628 Query: 661 QLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPE 720 QL G + + DI+G+++ + IDQSPIGRTP+S P TY G++ +R++FA E Sbjct: 629 QL-GIDTQKALAFEDIEGVKNIKAIKLIDQSPIGRTPKSMPVTYLGLYGKIRDIFASQKE 687 Query: 721 SRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKY 780 ++ RG++ G FS N G C C+G+G I+V+M F D+++PC+ C+GKR+ +E LE+KY Sbjct: 688 AKLRGFSSGAFSVNSPQGYCPQCKGEGYIRVQMFFFEDLFLPCEDCEGKRFRKEVLEVKY 747 Query: 781 KGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKL 840 K K IHEVL M+ +EA EFF L K+ + ++GL Y+RLGQ ATTLSGGEAQR+K+ Sbjct: 748 KDKNIHEVLSMSFDEAYEFFYEDNILREKINLIRELGLGYLRLGQPATTLSGGEAQRIKI 807 Query: 841 ARELSKRGTGQT------LYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDV 894 E+ TG+ +YILDEPT GLH+ DI++ L+++ +L D+ T+++IEHNL V Sbjct: 808 CEEILSSITGKKSTLKGVVYILDEPTVGLHYEDIKKFLNIVKRLLDKSATVIIIEHNLQV 867 Query: 895 IKTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLKPML 940 I A WI+DLGPEGG GG +L G + E S+TA++L+ L Sbjct: 868 ISEAQWIIDLGPEGGDKGGHLLYEGDLTEFLKLENSYTAKYLREYL 913 Score = 66.9 bits (162), Expect = 4e-09, Method: Composition-based stats. Identities = 37/121 (30%), Positives = 63/121 (52%), Gaps = 8/121 (6%) Query: 605 VPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQL-- 662 + E L + GAR NNLK++ + +P T ITG+SGSGKS+L DT++ Q + Sbjct: 2 HNSRKEDYLIIKGARQNNLKNIDVIIPHNKLTVITGISGSGKSSLAFDTIYAEGQWRFIE 61 Query: 663 ----NGATIAEPAPYRDIQGLEHFDKVIDIDQ-SPIGRTPRSNPATYTGVFTPVRELFAG 717 E P D+ +++ I ++Q +PI + R+ T+T ++ +R +F+ Sbjct: 62 CMSSYARVFIEKLPRPDVDLIDNLRPTIALEQRNPIKGS-RATVGTHTEIYDYLRIIFSK 120 Query: 718 V 718 V Sbjct: 121 V 121 >UniRef50_D2QFW0 Excinuclease ABC, A subunit n=2 Tax=Bacteroidetes RepID=D2QFW0_9SPHI Length = 997 Score = 918 bits (2372), Expect = 0.0, Method: Composition-based stats. Identities = 424/1001 (42%), Positives = 578/1001 (57%), Gaps = 95/1001 (9%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 63 I ++GA+ HNLK I++ IPR+KL+V+TGLSGSGKSSLAFDTL+AEGQR YVESLS+YARQ Sbjct: 22 IIIKGAKVHNLKGIDVAIPRNKLVVLTGLSGSGKSSLAFDTLFAEGQRMYVESLSSYARQ 81 Query: 64 FLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCPDH 123 FL MEKP+V++I+G+SPAI+IEQK ++ NPRSTVGT TEI+DYL+LLFAR G P Sbjct: 82 FLGRMEKPEVEYIKGVSPAIAIEQKVSTRNPRSTVGTSTEIYDYLKLLFARSGVTYSPIS 141 Query: 124 DVPLAAQTVSQMVDNVLSQPEG-----KRLMLLAPIIKERKGEHTKTLENLASQGYIRAR 178 + TV+ +V+ + G +R+M++AP+ L L +GY R Sbjct: 142 GHEVKKDTVTDVVNFMYGYEAGPGGAPQRVMIMAPLRIREGRTLAYELNILLQKGYTRIV 201 Query: 179 IDG----------EVCDLSDPPKLELQKKH------TIEVVVDRFKV--------RDDLT 214 DG +V + D + E ++E++VDR V +D Sbjct: 202 ADGGQDDAASSARQVLQIEDILENEGNYASLFADHASLEILVDRGTVLYDANGNPDEDNQ 261 Query: 215 QRLAESFETALELSGGTAVVADMDDPKAEELLFSANFACPICGYSMRELEPRLFSFNNPA 274 R ++S +TA GT V D E +FS F G + E LF+FNNP Sbjct: 262 YRFSDSVQTAFSEGEGTCRV---DVVGKESRVFSDKFELD--GIAFEEPSVNLFTFNNPY 316 Query: 275 GACPTCDGLGVQQYFDPDRVIQNPELSLAGGAIRGW--DRRNFYYFQMLKSLADHYKFDV 332 GAC CDG G DPD V+ + LS+ GAI W ++ + + + L + F + Sbjct: 317 GACRRCDGFGKVLGIDPDLVVPDKNLSVFEGAIAPWRSEKMSEEFLKPLLKNGIRFDFPI 376 Query: 333 EAPWGSLSANVHKVVLYGSGKENIEFKYMNDRGDTSIRRHPFEGVLHNMERRYKETESSA 392 P+ L+ +++ G F+G+ +T Sbjct: 377 HRPYKDLTPAEQELLWTG--------------------NKYFDGINAFFAFVESQTFKVQ 416 Query: 393 VREELAKFISNRPCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQR 452 R L+++ C C G+RLR++A +V V + + M + H FF +L+L + Sbjct: 417 YRVMLSRYRGKTTCPECRGSRLRKDAGYVKVGGKSITDLVLMPLTHVTAFFQDLELPAHQ 476 Query: 453 AKIAEKILKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVL 512 ++A +IL EI +RL F+ VGL YLTL+R TLSGGE QRI+LA+ +G+ LVG MY+L Sbjct: 477 QQVANRILIEIRNRLDFMERVGLGYLTLNRLTNTLSGGEYQRIKLATSLGSALVGSMYIL 536 Query: 513 DEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVV 572 DEPSIGLH RD +RL+ L LRD+GNTVIVVEH+E+ +RAAD +IDIGP AG GG ++ Sbjct: 537 DEPSIGLHPRDTQRLVSVLEALRDMGNTVIVVEHEEEVMRAADQLIDIGPDAGSLGGHLM 596 Query: 573 AEGPLEAIMA-------------------------------VPESLTGQYMSGKRKIEVP 601 +G I S T +++G+ + VP Sbjct: 597 FQGTWGDIKELGARSEERGVADASGSLHASATPHSSLLAPHSSSSHTIDFLTGRETVPVP 656 Query: 602 KKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQ 661 R ++L GAR NNLKDV + P+ T +TGVSGSGKSTLI L+P RQ Sbjct: 657 TFR--RKATNFIELKGARENNLKDVDVRFPLNTLTVVTGVSGSGKSTLIRKVLYPALMRQ 714 Query: 662 LNGATIAEPAPYRDIQG-LEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPE 720 G E + + G LE V IDQ+PIG++ RSNP TY + +R++ A P Sbjct: 715 -RGEGTEEAGRFDSLSGSLERISSVEMIDQNPIGKSSRSNPVTYIKAYDYLRQVMADQPV 773 Query: 721 SRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKY 780 S++RGY P FSFNV GGRCE CQG+G +K+EM F+ DIY+ C+ C GKR+ +E LE+ Sbjct: 774 SKSRGYKPSHFSFNVDGGRCEVCQGEGEVKIEMQFMADIYLKCEGCGGKRFKQEVLEVTL 833 Query: 781 KGKTIHEVLDMTIEEAREFFDAVP-ALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVK 839 K I ++LDMT++EA FF V +A KLQ L DVGL YI LGQSA TLSGGEAQRVK Sbjct: 834 HDKNISDILDMTVDEAIVFFRKVDNKMADKLQPLQDVGLGYIGLGQSANTLSGGEAQRVK 893 Query: 840 LARELSK--RGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKT 897 LA L K G L+I DEPTTGLHF DI++LL ++ L DQG+++++IEHN++VIK Sbjct: 894 LASFLGKGNPNKGSMLFIFDEPTTGLHFHDIRKLLAAINALVDQGDSVIIIEHNMEVIKN 953 Query: 898 ADWIVDLGPEGGSGGGEILVSGTPETVAE-CEASHTARFLK 937 AD I+D+GPEGG GG I+ +GTPE + + + +HTAR+LK Sbjct: 954 ADHIIDIGPEGGETGGYIMFTGTPEEMVKLDDGNHTARYLK 994 Score = 94.3 bits (233), Expect = 2e-17, Method: Composition-based stats. Identities = 38/112 (33%), Positives = 58/112 (51%), Gaps = 6/112 (5%) Query: 2 DKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYA 61 + IE++GAR +NLK++++ P + L VVTG+SGSGKS+L LY R+ E Sbjct: 664 NFIELKGARENNLKDVDVRFPLNTLTVVTGVSGSGKSTLIRKVLYPALMRQRGEGTEEAG 723 Query: 62 RQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFA 113 R + +E +S I+Q + RS T + +DYLR + A Sbjct: 724 R--FDSLS----GSLERISSVEMIDQNPIGKSSRSNPVTYIKAYDYLRQVMA 769 Score = 74.3 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 36/118 (30%), Positives = 59/118 (50%), Gaps = 6/118 (5%) Query: 608 NPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATI 667 +P++ + + GA+ +NLK + + +P +TG+SGSGKS+L DTLF QR + Sbjct: 17 DPKQFIIIKGAKVHNLKGIDVAIPRNKLVVLTGLSGSGKSSLAFDTLFAEGQRMYVESLS 76 Query: 668 AEPAPYRDI---QGLEHFDKV---IDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVP 719 + + +E+ V I I+Q R PRS T T ++ ++ LFA Sbjct: 77 SYARQFLGRMEKPEVEYIKGVSPAIAIEQKVSTRNPRSTVGTSTEIYDYLKLLFARSG 134 >UniRef50_B3DZR5 Excinuclease ABC subunit A, ATPase n=1 Tax=Methylacidiphilum infernorum V4 RepID=B3DZR5_METI4 Length = 1840 Score = 909 bits (2350), Expect = 0.0, Method: Composition-based stats. Identities = 369/975 (37%), Positives = 542/975 (55%), Gaps = 47/975 (4%) Query: 1 MDKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAY 60 M+ I +R HNLKNI+L IP L V+TGLSGSGKSSLAFDTL+AEGQ RY+E+ Y Sbjct: 1 MESIRLRKISVHNLKNIDLDIPHSTLTVITGLSGSGKSSLAFDTLFAEGQSRYIETYPPY 60 Query: 61 ARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRC 120 RQFL +EKP + IEG+ PAI++EQ T+ N RSTV T+T I DYL+LL+ARV P C Sbjct: 61 IRQFLLRVEKPKAESIEGILPAIAVEQDRTTANSRSTVATMTGIADYLKLLYARVSIPIC 120 Query: 121 PDHDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARID 180 P P+ T +++ + S K ++ P+ + + L SQGY + +D Sbjct: 121 PRCRQPVKKSTPKGILELLFSAYLHKSFLIGYPVRFAPHTSFKEACQMLLSQGYSKIWLD 180 Query: 181 GEVCDLSDPPKLELQKK-HTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVADMDD 239 + + + L L I V+ KV + RL ES E + +L G ++ + Sbjct: 181 NRIVRIDEEFALPLPPDFQEILVIHSLEKVEYERESRLLESLEESFKLGRG--IIHTLFL 238 Query: 240 PKAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPE 299 P+ + L FS CP + + P LFSFNNP GACP+C G G D D+VI Sbjct: 239 PENQVLSFSNQLVCPQDKIAFEDPFPALFSFNNPKGACPSCHGFGRIISIDYDKVIPEKN 298 Query: 300 LSLAGGAIRGWDRRNFYYFQM-LKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKENIEF 358 LS+ GGAIR + +F ++Q+ L+ + + + + + +L G Sbjct: 299 LSVEGGAIRPFQSAHFAHWQIFLERMLKKRRISPSKKISAYDSREWEYLLKGED------ 352 Query: 359 KYMNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGTRLRREA 418 + DT I + + G+ K+T + +R L+++ C C+G+R ++ Sbjct: 353 --PSADPDTLIEQDLWCGLEGFFSILEKKTYQTHIRVFLSRYRLYTLCPDCQGSRFNKKT 410 Query: 419 RHVYVE----NTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNVG 474 + + I + + L + Q K KI +EI RL +L ++G Sbjct: 411 LDYKIFFGQTPLSIGEFLHSPISELIPIVDKLDV-PQSDKATLKIKEEIASRLGYLDHIG 469 Query: 475 LNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHL 534 L YLTL R + TLSGGE +R L +G L ++VLDEP+IGLH +D+ RL+ + L Sbjct: 470 LGYLTLDRPSRTLSGGETRRANLTICLGNKLTHTLFVLDEPTIGLHPKDSSRLVELIKKL 529 Query: 535 RDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSG 594 RD GNTV+VVEHDE I+ AD+++++GPG G GGEVV G LE ++ +SLTG Y+SG Sbjct: 530 RDQGNTVVVVEHDETVIKNADYIVELGPGTGEEGGEVVYAGNLEGLLLKEDSLTGAYLSG 589 Query: 595 KRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTL 654 ++ + +P+KR K+ ++ A +NL + + +P+GLF +TGVSG GKS+L++D + Sbjct: 590 RKTLPLPQKRREPRQGKL-EIRKAHVHNLHGLDVDIPLGLFVTVTGVSGCGKSSLVHDII 648 Query: 655 FPIAQR--QLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVR 712 R +LN + + G E +VI+IDQ+PI +TPRSN A Y G++ VR Sbjct: 649 AHGLYRIKELNPPQGTFFSGRAHLNGWEKIGEVIEIDQTPIFKTPRSNIALYLGIWQYVR 708 Query: 713 ELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYN 772 +LFA E++++G G FS N GRC C G G K+EM FL D++VPC C+GKR+ Sbjct: 709 KLFASTDEAQSQGIGEGSFSMNSGDGRCPRCLGLGYEKIEMQFLSDVFVPCSVCEGKRFQ 768 Query: 773 RETLEIKYKGKTIHEVLDMTIEEAREFFDAV-----------PALARKLQTLMDVGLTYI 821 L I+Y+GK+I ++ +MT++EA FF + +L L +VGL Y+ Sbjct: 769 PPILAIRYRGKSIDQIFEMTVKEASLFFCPKQDNADPQSVLCKRIVDRLGMLSEVGLDYL 828 Query: 822 RLGQSATTLSGGEAQRVKLARELSKRGTGQ----------------TLYILDEPTTGLHF 865 RLG LSGGE+QR+K+ L ++ G + ILDEPTTGLH Sbjct: 829 RLGHPLNQLSGGESQRLKILAILGEKHFGSPADPSPGKMKPGKDRQRIIILDEPTTGLHM 888 Query: 866 ADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVA 925 D+++L+ +L KL + GN+++V+EHNLDVI ++DW++DLGP GG GG+I+ G PET+A Sbjct: 889 DDVKRLIGLLQKLVELGNSLIVVEHNLDVILSSDWVIDLGPLGGKQGGKIIAQGPPETIA 948 Query: 926 ECEASHTARFLKPML 940 S T FL L Sbjct: 949 ATAGSFTGFFLNEKL 963 Score = 536 bits (1382), Expect = e-150, Method: Composition-based stats. Identities = 235/559 (42%), Positives = 348/559 (62%), Gaps = 24/559 (4%) Query: 406 CASCEGTRLRREARHVYV----ENT--PLPAISDMSIGHAMEFFNNLKLAG-QRAKIAEK 458 C C+G R+ AR V + + + + + + I +++F +++ + Q+ I EK Sbjct: 1277 CPDCQGKRINLGARSVSLPWPLKGSKPTIDLLCSLPISLLLDYFKSIEPSSSQQKAIVEK 1336 Query: 459 ILKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIG 518 I+ I RLKF+ +GL+YL+L R A++LS GE QR+ L SQ+G+ L GV+Y+LDEP+IG Sbjct: 1337 IVPAIIKRLKFIEEMGLHYLSLDREAQSLSAGELQRLYLCSQLGSNLQGVLYILDEPTIG 1396 Query: 519 LHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLE 578 LH +N++LL L L+ GNT+++VEHD +A++ AD ++D+GPGAGV GGE++ EG Sbjct: 1397 LHPTENQKLLDCLEELKSKGNTLLIVEHDTEAMKRADKIVDLGPGAGVDGGEIIFEGNYS 1456 Query: 579 AIMAVPESLTGQYMSGKRKIEVP--KKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFT 636 ++ S T +Y+ + +R LK+ G R +NLKD+ + +P+G F Sbjct: 1457 QLLLCKNSTTARYLCRPMHHPLKGSDRRSCKEHPSWLKILGIRVHNLKDLDIEIPLGRFV 1516 Query: 637 CITGVSGSGKSTLINDTLFPIAQRQLNGATIAEPAPY-RDIQGLEHFDKVIDIDQSPIGR 695 I GVSGSGKSTL+ + +F ++ LN + + G E V +DQ+PIG+ Sbjct: 1517 VICGVSGSGKSTLLREVIFAAVKKLLNKSPKKIQKECWSKVIGAEALGDVCFVDQTPIGK 1576 Query: 696 TPRSNPATYTGVFTPVRELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHF 755 PRS P TY G+F +RELFA P SR RGYT RFS+N + GRC C+G+G I V M Sbjct: 1577 NPRSTPLTYLGLFDRIRELFAQTPLSRQRGYTKSRFSYNSKEGRCPDCEGNGTIPVSMPL 1636 Query: 756 LPDIYVPCDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMD 815 LP ++PC+ C+GKRYN +TLE++YK K+IH++L MT EA FF + L + L D Sbjct: 1637 LPLFFLPCESCEGKRYNPQTLEVRYKEKSIHDILCMTAAEACSFFSPIEKLHKPFSILCD 1696 Query: 816 VGLTYIRLGQSATTLSGGEAQRVKLAREL--------------SKRGTGQTLYILDEPTT 861 +GL+Y+RLGQ TLSGGEAQR+KLA++L + LY+L+EPT Sbjct: 1697 IGLSYLRLGQPTPTLSGGEAQRIKLAKDLIAMEQKVIQKEFHWGPSRQSKILYLLEEPTI 1756 Query: 862 GLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTP 921 GLH ADI++ L + +L + G+T+VVIEH+ +VI AD++++LGP G GG+I+ G P Sbjct: 1757 GLHLADIEKFLHLCQRLVELGHTVVVIEHHPEVIAEADYVIELGPGAGEKGGKIIGQGPP 1816 Query: 922 ETVAECEASHTARFLKPML 940 E++A+ S TA FLK ++ Sbjct: 1817 ESLAKAANSPTAPFLKGVI 1835 Score = 298 bits (762), Expect = 1e-78, Method: Composition-based stats. Identities = 126/320 (39%), Positives = 187/320 (58%), Gaps = 10/320 (3%) Query: 3 KIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYAR 62 + +RGAR HNLK+I+L I +K V+TG+SGSGKS+LAFD L+AE +RR+++SLS Y R Sbjct: 985 TLSIRGARHHNLKSISLEIDLEKTTVLTGISGSGKSTLAFDVLFAESRRRFLDSLSGYGR 1044 Query: 63 QFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCPD 122 QF+ +EKP VD IEGL P+I+IEQ+ST +STVGT++EIH +LRLLFA+ G P PD Sbjct: 1045 QFIQSLEKPQVDDIEGLPPSIAIEQRSTIPGSKSTVGTLSEIHPFLRLLFAKTGIPFDPD 1104 Query: 123 HDVPLAAQTVSQMVDNVLSQP-EGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARIDG 181 Q+ +++ +V S ++L +LAP++++RKG ++ + +GY RIDG Sbjct: 1105 TLEEAIQQSPEEILSSVRSLLMPDRKLRILAPLVRDRKGLYSSLAKWAQKKGYPGFRIDG 1164 Query: 182 EVCDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVADMDDPK 241 + P+L K HTI++ + + L + LA++ TAL G V D+ + Sbjct: 1165 CWYEPGSFPRLSRFKNHTIDLWLGTVTAQSSLEE-LAKNVSTAL--GLGKESVIFFDETQ 1221 Query: 242 AEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFD--PDRVIQN-P 298 + L+S F CP G S L+PRLFSF++P G C C G G + + P + + Sbjct: 1222 NRDYLYSTKFHCPRSGKSFDALDPRLFSFHSPLGWCCRCLGNGKIEESEDQPPILCPDCQ 1281 Query: 299 ELSLAGGA---IRGWDRRNF 315 + GA W + Sbjct: 1282 GKRINLGARSVSLPWPLKGS 1301 Score = 232 bits (591), Expect = 6e-59, Method: Composition-based stats. Identities = 109/345 (31%), Positives = 168/345 (48%), Gaps = 32/345 (9%) Query: 404 RPCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEI 463 PC+ CEG R + + + I +M++ A FF + + + K I Sbjct: 757 VPCSVCEGKRFQPPILAIRYRGKSIDQIFEMTVKEASLFFCPKQDNADPQSV---LCKRI 813 Query: 464 GDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIG------------AGLVG---- 507 DRL L VGL+YL L LSGGE+QR+++ + +G + Sbjct: 814 VDRLGMLSEVGLDYLRLGHPLNQLSGGESQRLKILAILGEKHFGSPADPSPGKMKPGKDR 873 Query: 508 -VMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGV 566 + +LDEP+ GLH D +RL+G L L +LGN++IVVEH+ D I ++D VID+GP G Sbjct: 874 QRIIILDEPTTGLHMDDVKRLIGLLQKLVELGNSLIVVEHNLDVILSSDWVIDLGPLGGK 933 Query: 567 HGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEVPKKR------VPANPEKVLKLTGARG 620 GG+++A+GP E I A S TG +++ K K + P P ++ L + GAR Sbjct: 934 QGGKIIAQGPPETIAATAGSFTGFFLNEKLKAKSPFLPSSSFYFTPPAKKQTLSIRGARH 993 Query: 621 NNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAEPAPYRDIQGLE 680 +NLK ++L + + T +TG+SGSGKSTL D LF ++R+ + + Sbjct: 994 HNLKSISLEIDLEKTTVLTGISGSGKSTLAFDVLFAESRRRFLDSLSGYGRQFIQSLEKP 1053 Query: 681 HFDKV------IDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVP 719 D + I I+Q +S T + + +R LFA Sbjct: 1054 QVDDIEGLPPSIAIEQRSTIPGSKSTVGTLSEIHPFLRLLFAKTG 1098 Score = 166 bits (421), Expect = 3e-39, Method: Composition-based stats. Identities = 81/232 (34%), Positives = 120/232 (51%), Gaps = 25/232 (10%) Query: 726 YTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKYK---- 781 P FSF+ G C C G+G I+ + C C+GKR N + Sbjct: 1243 LDPRLFSFHSPLGWCCRCLGNGKIEES---EDQPPILCPDCQGKRINLGARSVSLPWPLK 1299 Query: 782 --GKTIHEVLDMTIEEAREFFDA---------------VPALARKLQTLMDVGLTYIRLG 824 TI + + I ++F + VPA+ ++L+ + ++GL Y+ L Sbjct: 1300 GSKPTIDLLCSLPISLLLDYFKSIEPSSSQQKAIVEKIVPAIIKRLKFIEEMGLHYLSLD 1359 Query: 825 QSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNT 884 + A +LS GE QR+ L +L G LYILDEPT GLH + Q+LLD L +L+ +GNT Sbjct: 1360 REAQSLSAGELQRLYLCSQLGSNLQG-VLYILDEPTIGLHPTENQKLLDCLEELKSKGNT 1418 Query: 885 IVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFL 936 ++++EH+ + +K AD IVDLGP G GGEI+ G + C+ S TAR+L Sbjct: 1419 LLIVEHDTEAMKRADKIVDLGPGAGVDGGEIIFEGNYSQLLLCKNSTTARYL 1470 Score = 157 bits (396), Expect = 2e-36, Method: Composition-based stats. Identities = 69/205 (33%), Positives = 106/205 (51%), Gaps = 29/205 (14%) Query: 405 PCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIG 464 PC SCEG R + V + + I M+ A FF+ ++ + I Sbjct: 1643 PCESCEGKRYNPQTLEVRYKEKSIHDILCMTAAEACSFFSPIEKLHKPFSI--------- 1693 Query: 465 DRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIG---------------AGLVGVM 509 L ++GL+YL L + TLSGGEAQRI+LA + + ++ Sbjct: 1694 -----LCDIGLSYLRLGQPTPTLSGGEAQRIKLAKDLIAMEQKVIQKEFHWGPSRQSKIL 1748 Query: 510 YVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGG 569 Y+L+EP+IGLH D E+ L L +LG+TV+V+EH + I AD+VI++GPGAG GG Sbjct: 1749 YLLEEPTIGLHLADIEKFLHLCQRLVELGHTVVVIEHHPEVIAEADYVIELGPGAGEKGG 1808 Query: 570 EVVAEGPLEAIMAVPESLTGQYMSG 594 +++ +GP E++ S T ++ G Sbjct: 1809 KIIGQGPPESLAKAANSPTAPFLKG 1833 Score = 96.2 bits (238), Expect = 5e-18, Method: Composition-based stats. Identities = 43/165 (26%), Positives = 71/165 (43%), Gaps = 25/165 (15%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 63 +++ G R HNLK++++ IP + +V+ G+SGSGKS+L + ++A ++ +S + Sbjct: 1493 LKILGIRVHNLKDLDIEIPLGRFVVICGVSGSGKSTLLREVIFAAVKKLLNKS-----PK 1547 Query: 64 FLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVG------- 116 + V E L ++Q NPRST T + D +R LFA+ Sbjct: 1548 KIQKECWSKVIGAEALGDVCFVDQTPIGKNPRSTPLTYLGLFDRIRELFAQTPLSRQRGY 1607 Query: 117 ----------EPRCPDH---DVPLAAQTVSQMVDNVLSQPEGKRL 148 E RCPD + + + EGKR Sbjct: 1608 TKSRFSYNSKEGRCPDCEGNGTIPVSMPLLPLFFLPCESCEGKRY 1652 >UniRef50_B1ZMZ6 Excinuclease ABC, A subunit n=1 Tax=Opitutus terrae PB90-1 RepID=B1ZMZ6_OPITP Length = 999 Score = 908 bits (2346), Expect = 0.0, Method: Composition-based stats. Identities = 432/995 (43%), Positives = 576/995 (57%), Gaps = 88/995 (8%) Query: 27 IVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQFLSLMEKPDVDHIEGLSPAISIE 86 +V+TG SGSGKSSLAFDTLYAEG R+Y+ESLS ARQ L + +PDVD I GLSP ++IE Sbjct: 1 MVITGPSGSGKSSLAFDTLYAEGYRKYMESLSTQARQVLEQLRRPDVDFIHGLSPVLAIE 60 Query: 87 QKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCPDHDVPLAAQTVSQMVDNVLSQPEGK 146 Q++ S PRST+ T TE+ DY +LL+A GE RCP + +++ V VL++ G+ Sbjct: 61 QRTGSGGPRSTIATATELADYAQLLWALCGEQRCPKDGGRVVQRSLDGNVQRVLTECAGE 120 Query: 147 RLMLLAPIIKERKGEHTKTLENLASQGYIRARIDGEVCDLSDPPKLELQKKH---TIEVV 203 R+MLLAP ++ + + L L +G+ R R+DGEV +L +P + T+++V Sbjct: 121 RIMLLAPAMQAKASVLREELPRLRQRGFQRVRLDGEVRNLDEPKLIPANAGAKLITVDLV 180 Query: 204 VDRFKVRDDLTQRLAESFETALELSGGTAVVADMDDP----------------------- 240 +DR D RLA+S E A A+V Sbjct: 181 IDRLVANADQRSRLADSLELAFREGKDRAIVLAQKQAAGRVASVAGVVDPGPGSASPATT 240 Query: 241 ------KAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRV 294 + E+ S + AC +CG L P+ FSFN+ GACPTC GLG + F P+ + Sbjct: 241 SASAPAEWREIPLSQSLACEVCGDVFERLTPKHFSFNHSEGACPTCGGLGRKMRFVPELI 300 Query: 295 IQNPELSLAGGAIRGWDRRNF----YYFQMLKSLADHYKFDVEAPWGSLSANVHKVVLYG 350 + +PE S+ GAI+ W + +LK LA+ FD + PW SLS + VL+G Sbjct: 301 VPDPEKSVREGAIKPWRIGGKNLIIKHNALLKQLAEQLPFDPDVPWRSLSEETRRAVLHG 360 Query: 351 SGKENIEFKYMNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCE 410 +G+ FK R + PF GV+ ++E ++ T+S R L F+ C C Sbjct: 361 AGERQFAFKLRRMREPKT---MPFAGVIADLEESWRHTDSEGFRARLTTFMVAGECPECH 417 Query: 411 GTRLRREARHVYVE---------------------------------NTPLPAISDMSIG 437 GTRL + V + P + + I Sbjct: 418 GTRLNARSGAVRLNLGSEPAPSGTGVPPVDSGSASDDHGRDARATTSPLSFPEFNALDIE 477 Query: 438 HAMEFFNNLKLAGQRA------------KIAEKILKEIGDRLKFLVNVGLNYLTLSRSAE 485 A EF L + +++ I RL FL GL YLTL R Sbjct: 478 AAHEFARRLDIEAAHEFARRAVATYGDNDAVREVVTGIEQRLHFLAETGLGYLTLDRDYA 537 Query: 486 TLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVE 545 TLSGGEAQR+RLA+Q+G GL+GV+YVLDEPSIGLH DN++LL TL+ LRD GNTVIVVE Sbjct: 538 TLSGGEAQRVRLATQLGMGLMGVIYVLDEPSIGLHPHDNQKLLDTLVALRDRGNTVIVVE 597 Query: 546 HDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAI--MAVPESLTGQYMSGKRKIEVPKK 603 HDE+ +R AD +I++GP AGV GG V+ +G ++ S TG Y++ + Sbjct: 598 HDEETMRLADELIELGPEAGVEGGRVLFQGSPADCMKLSAKVSRTGPYLARTMGVTKDAA 657 Query: 604 RVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLN 663 + L + AR NNL+ + PVGL TC+TGVSGSGKSTL+ND L A R+LN Sbjct: 658 TKQPD-GAWLTVREARENNLRGIDARFPVGLLTCVTGVSGSGKSTLVNDILAAAAARKLN 716 Query: 664 GATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESRA 723 GA P +R I+ L+ F+K++ +DQ PIGR+PRSNPATY + +R+LFA +P ++ Sbjct: 717 GAKTL-PGKHRAIENLDFFEKLVRVDQEPIGRSPRSNPATYVDLLGLLRDLFAQMPLAKI 775 Query: 724 RGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKYKGK 783 RGY RFSFNVRGGRCE CQGDGVIK++M FL D Y PC C G+R+NRETLE+ + GK Sbjct: 776 RGYKASRFSFNVRGGRCERCQGDGVIKLDMQFLADAYAPCPSCGGRRFNRETLEVLFHGK 835 Query: 784 TIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARE 843 +I +VLD+T+ EA F +P + KL TL VGL Y+ LGQSATTLSGGEAQR+KL+ E Sbjct: 836 SIADVLDLTVREAMSLFRNIPRVMDKLTTLDAVGLGYLTLGQSATTLSGGEAQRIKLSLE 895 Query: 844 LSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADWIVD 903 LSKR G TLYILDEPTTGLH+ DIQ+L+D+L KLRD GNT++VIEHNLDVI ADWI+D Sbjct: 896 LSKRQQGHTLYILDEPTTGLHWVDIQKLMDLLFKLRDAGNTVIVIEHNLDVINLADWIID 955 Query: 904 LGPEGGSGGGEILVSGTPETVAECEASHTARFLKP 938 LGP GG GG+++ +G + S T L+ Sbjct: 956 LGPGGGRAGGDVVFAGPRTEIELKAPSLTGAALRR 990 Score = 90.0 bits (222), Expect = 4e-16, Method: Composition-based stats. Identities = 36/113 (31%), Positives = 53/113 (46%), Gaps = 13/113 (11%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 63 + VR AR +NL+ I+ P L VTG+SGSGKS+L D L A R+ + + + Sbjct: 666 LTVREARENNLRGIDARFPVGLLTCVTGVSGSGKSTLVNDILAAAAARKLNGAKTLPGKH 725 Query: 64 FLSLMEKPDVDHIEGLS---PAISIEQKSTSHNPRSTVGTITEIHDYLRLLFA 113 IE L + ++Q+ +PRS T ++ LR LFA Sbjct: 726 R----------AIENLDFFEKLVRVDQEPIGRSPRSNPATYVDLLGLLRDLFA 768 >UniRef50_A1WZ98 UvrA family protein n=2 Tax=Proteobacteria RepID=A1WZ98_HALHL Length = 1896 Score = 900 bits (2326), Expect = 0.0, Method: Composition-based stats. Identities = 401/1034 (38%), Positives = 543/1034 (52%), Gaps = 131/1034 (12%) Query: 2 DKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYA 61 + I +RGAR HNL+ ++L +P +LIVVTG+SGSGKSSLAFDT+YAEGQRRYVE+ SAYA Sbjct: 3 EPIRIRGARQHNLQGLDLDLPAGELIVVTGVSGSGKSSLAFDTVYAEGQRRYVETFSAYA 62 Query: 62 RQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCP 121 RQFL M++P V+ I+G+ PAI+I+Q + RSTVGT+TE+ D+L+LLFAR +P C Sbjct: 63 RQFLERMDRPHVERIDGVPPAIAIDQVNPVRTSRSTVGTMTELSDHLKLLFARAAQPYCS 122 Query: 122 DHDVPLAAQTVSQMVDNVLS------QPEGKRLMLLAPIIKERKGEHTKTLENLASQGYI 175 P+ T + + +L+ P G R+ + + + + + L+SQGY Sbjct: 123 GCGRPVRPDTPESVAEGLLAGEGAAPWPPGTRVAVTFFVAVPDGLDRDELRQMLSSQGYT 182 Query: 176 RARIDGEVCDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVA 235 R ++ +EVV DR ++ + RL E+ E AL+ G V Sbjct: 183 RIY----------------ERPGGVEVVQDRLRLDAERRGRLIEAVEIALDKGRGRCQVW 226 Query: 236 DMD---DPKAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPD 292 + +P E +SA F C C LFSFN+P GAC TC G G DPD Sbjct: 227 ALGEDREPAGEPRRYSATFHCAGCDRDYPRPTAELFSFNSPVGACDTCRGFGRNMEIDPD 286 Query: 293 RVIQNPELSLAGGAIRGWDRRNFYYFQM-LKSLADHYKFDVEAPWGSLSANVHKVVLYGS 351 VI +P SLA GAI+ + Q L A V+ PW L A + V G Sbjct: 287 LVIPDPTRSLADGAIKPFRGGASVECQEDLLRAARRRGVAVDVPWQELDAADRQWVWDGE 346 Query: 352 GKENIEFKYMNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEG 411 + R + GV + +++ VR +L+++ + R C C+G Sbjct: 347 DRWG--------------RSGRWYGVRGYFDYLERKSYKMHVRVQLSRYRTYRTCPDCQG 392 Query: 412 TRLRREARHVYVENT-------------------------------PLPAISDMSIGHAM 440 RL EA + L ++ + + Sbjct: 393 ARLVPEALDFRLGGRQEADAVLAPEQRFRPRHLELDDAALAALPGLTLHDLATLPLERLQ 452 Query: 441 EFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQ 500 +FF+ L L + A +L EI R+ +L VGL YLTL R + TLSGGE QRI L + Sbjct: 453 QFFDGLVLPPPLDEAAATVLDEIRSRVGYLNEVGLGYLTLDRQSRTLSGGEVQRINLTTA 512 Query: 501 IGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDI 560 +G LV ++VLDEPSIGLH RD +RL+G L LRD GN+++VVEHD + AAD +ID+ Sbjct: 513 LGTSLVNTLFVLDEPSIGLHPRDVDRLVGILQRLRDAGNSLLVVEHDPQVMAAADRIIDM 572 Query: 561 GPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKI---------------------- 598 GPG G GG VV G + A +S T Y++G+R++ Sbjct: 573 GPGPGERGGRVVFNGAPAELYAA-DSATADYLTGRRRVSRRDGCAPGAWGAGEELSEARL 631 Query: 599 -----------------------EVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLF 635 + A L + GAR +NL+ + + +P+G Sbjct: 632 AGRTRRDARSAGPDGAGEKRSASSPAPHQAAAADGPALTIRGARAHNLQGIDVAIPLGGL 691 Query: 636 TCITGVSGSGKSTLINDTLFPIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGR 695 C+TGVSGSGKSTL D L+ RQ G + P + I G E V +DQSPIG+ Sbjct: 692 VCLTGVSGSGKSTLAEDILYRGLLRQ-QGEAVEAPGEHDGIDGAEAITAVALVDQSPIGK 750 Query: 696 TPRSNPATYTGVFTPVRELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHF 755 + RS P +YTG P+R+ FA P +R RGYT G FSFN GRC C+G G VEM F Sbjct: 751 SARSCPVSYTGALDPIRKRFAAAPLARERGYTAGAFSFNAGNGRCPTCKGSGFEHVEMQF 810 Query: 756 LPDIYVPCDQCKGKRYNRETLEIKYKG-----KTIHEVLDMTIEEAREFFDAVPALARKL 810 L D+Y+ C C G+R+ E LE++ +G +IHEVL MT +EA EFF + R+L Sbjct: 811 LSDVYLACPDCDGRRFRAEVLEVQVEGPEGRRASIHEVLAMTADEAVEFFADSREVVRRL 870 Query: 811 QTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQ-------TLYILDEPTTGL 863 + L VGL Y+RLGQ TLSGGEAQR+KLA L++RG + TL I DEPTTGL Sbjct: 871 EPLRAVGLGYLRLGQPVPTLSGGEAQRLKLAGHLAERGKAKGGESGAGTLLIFDEPTTGL 930 Query: 864 HFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPET 923 HF+D Q LLD +L D G +++VIEHNLD+I ADWI+DLGPEGG GGG +L SGTP Sbjct: 931 HFSDCQVLLDAFQRLVDAGYSLLVIEHNLDLIANADWILDLGPEGGEGGGRLLASGTPAQ 990 Query: 924 VAECEASHTARFLK 937 +A A+ T R L Sbjct: 991 LAAH-ATDTGRALA 1003 Score = 579 bits (1492), Expect = e-163, Method: Composition-based stats. Identities = 277/551 (50%), Positives = 362/551 (65%), Gaps = 16/551 (2%) Query: 404 RPCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEI 463 R C +C+G RL AR V + ++ S+ + L L + A I ++ E+ Sbjct: 1340 RVCPACQGGRLNPVARAVRFHGRSITEVTATSVAELRPWLEGLSLDDREAAIGGDVIAEV 1399 Query: 464 GDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRD 523 RL FL VGL YLTL R+A TLSGGEAQRIRLA+ +GAGL GV YVLDEP+IGLH RD Sbjct: 1400 RARLAFLERVGLGYLTLDRAAPTLSGGEAQRIRLAASLGAGLQGVCYVLDEPTIGLHARD 1459 Query: 524 NERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAV 583 N LLG L L + GNTV+VVEHDE+ IRAA+H++D+GPGAG HGG VVAEG L A+ Sbjct: 1460 NAMLLGALRELAEAGNTVVVVEHDEETIRAAEHLVDLGPGAGRHGGRVVAEGDLAAVTGN 1519 Query: 584 PESLTGQYMSGKRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSG 643 +SLTG+ ++ + +R A ++ +TGA +NL+ V + LP+G +TGVSG Sbjct: 1520 ADSLTGRVLAHPPRHPTRARRSEAPAAQL-TVTGAHRHNLQQVDVALPLGRLIGVTGVSG 1578 Query: 644 SGKSTLINDTLFPIAQRQLN---GATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSN 700 SGKS+L+ + + P + L GA + EP + + G EH +V+++DQ+PIGRTPRS Sbjct: 1579 SGKSSLVREVIEPSVRALLGRKRGAPVPEPVGCQAVAGTEHLRRVLEVDQTPIGRTPRSC 1638 Query: 701 PATYTGVFTPVRELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIY 760 PATY G++ P+R LFAG E+R RG+ RFSFN +GGRCEAC G GV VEM FLPD+ Sbjct: 1639 PATYVGIWDPIRRLFAGTEEARLRGWDAARFSFNTKGGRCEACSGQGVKTVEMSFLPDVK 1698 Query: 761 VPCDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTY 820 VPC+ C G R++ ET +++Y G +I +VL ++IEEA+ FF A P + L+ L DVGL Y Sbjct: 1699 VPCEVCGGTRFDEETRQVRYAGHSIDQVLALSIEEAQAFFSAHPRIHHVLRLLCDVGLGY 1758 Query: 821 IRLGQSATTLSGGEAQRVKLARELSK-----------RGTGQTLYILDEPTTGLHFADIQ 869 + LGQ + TLSGGEAQR+KL EL+K R TLY+LDEPT GLH AD+Q Sbjct: 1759 LSLGQPSPTLSGGEAQRLKLVTELAKARPVDGGPGRARQAAPTLYLLDEPTVGLHIADVQ 1818 Query: 870 QLLDVLHKLRDQGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEA 929 +L DV H L D G+T+VVIEHNLDVI AD ++DLGPEGG GG ++ SG PE VA Sbjct: 1819 RLTDVFHALVDAGHTVVVIEHNLDVIAEADHVIDLGPEGGDAGGSVVGSGAPEAVAA-MD 1877 Query: 930 SHTARFLKPML 940 + T R L+ L Sbjct: 1878 TPTGRALQAFL 1888 Score = 300 bits (768), Expect = 2e-79, Method: Composition-based stats. Identities = 128/289 (44%), Positives = 181/289 (62%), Gaps = 1/289 (0%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 63 IEV AR HNL+NI++ IPRD+L VVTG+SGSGKS+LAFD L+AEGQRRY+ESL+AYARQ Sbjct: 1042 IEVHQAREHNLRNIDVTIPRDRLTVVTGVSGSGKSTLAFDILFAEGQRRYLESLNAYARQ 1101 Query: 64 FLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCPDH 123 + +PDV + G+ PA++IEQ+++ RSTV T+TEI+ YLRLL+ R+G CP+ Sbjct: 1102 LVQPASRPDVGAVTGIPPAVAIEQRTSRGGYRSTVATLTEIYHYLRLLYLRLGVQYCPEC 1161 Query: 124 DVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARIDGEV 183 V + AQT + +L G+R++ AP++ RKG + + A +GY R+DGE+ Sbjct: 1162 QVAIEAQTPVGIAARLLRDYRGQRIVFYAPLVVARKGIYKELAAWAAGRGYEALRVDGEL 1221 Query: 184 CDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVADMDDPKAE 243 + P+L+ ++H I++ + +V+ D L E E AL+ GT +A D Sbjct: 1222 QPTAQWPRLDRYREHDIDLPLGSLEVQPDAEAALRERLEEALDHGDGTVRIAPQDGGVEA 1281 Query: 244 ELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPD 292 E ++S ACP CG E +PRLFSFN+ G C C G G+ DPD Sbjct: 1282 ERVWSTRRACPGCGQGFAEPDPRLFSFNSRHGWCSGCHGTGLLVR-DPD 1329 Score = 189 bits (481), Expect = 3e-46, Method: Composition-based stats. Identities = 99/344 (28%), Positives = 148/344 (43%), Gaps = 51/344 (14%) Query: 403 NRPCASCEGTRLRREARHVYVEN-----TPLPAISDMSIGHAMEFFNNLKLAGQRAKIAE 457 C C+G R R E V VE + + M+ A+EFF + Sbjct: 815 YLACPDCDGRRFRAEVLEVQVEGPEGRRASIHEVLAMTADEAVEFFAD------------ 862 Query: 458 KILKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGV--------M 509 +E+ RL+ L VGL YL L + TLSGGEAQR++LA + + Sbjct: 863 --SREVVRRLEPLRAVGLGYLRLGQPVPTLSGGEAQRLKLAGHLAERGKAKGGESGAGTL 920 Query: 510 YVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGG 569 + DEP+ GLH D + LL L D G +++V+EH+ D I AD ++D+GP G GG Sbjct: 921 LIFDEPTTGLHFSDCQVLLDAFQRLVDAGYSLLVIEHNLDLIANADWILDLGPEGGEGGG 980 Query: 570 EVVAEGPLEAIMAV------------------PESLTGQYMSGKRKIEVPKKRVPANPEK 611 ++A G + A P+ G + A Sbjct: 981 RLLASGTPAQLAAHATDTGRALADDWASQAVAPDEGAGAAALQHPAVAEAAAPYTAPAPA 1040 Query: 612 VLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQL------NGA 665 +++ AR +NL+++ +T+P T +TGVSGSGKSTL D LF QR+ Sbjct: 1041 AIEVHQAREHNLRNIDVTIPRDRLTVVTGVSGSGKSTLAFDILFAEGQRRYLESLNAYAR 1100 Query: 666 TIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFT 709 + +PA D+ + + I+Q RS AT T ++ Sbjct: 1101 QLVQPASRPDVGAVTGIPPAVAIEQRTSRGGYRSTVATLTEIYH 1144 Score = 183 bits (465), Expect = 2e-44, Method: Composition-based stats. Identities = 80/229 (34%), Positives = 114/229 (49%), Gaps = 19/229 (8%) Query: 727 TPGRFSFNVRGGRCEACQGDGVIKVE----MHFLPDIYVPCDQCKGKRYNRETLEIKYKG 782 P FSFN R G C C G G++ + + C C+G R N +++ G Sbjct: 1302 DPRLFSFNSRHGWCSGCHGTGLLVRDPDEAEAAELEAARVCPACQGGRLNPVARAVRFHG 1361 Query: 783 KTIHEVLDMTIEEAREFFDA--------------VPALARKLQTLMDVGLTYIRLGQSAT 828 ++I EV ++ E R + + + + +L L VGL Y+ L ++A Sbjct: 1362 RSITEVTATSVAELRPWLEGLSLDDREAAIGGDVIAEVRARLAFLERVGLGYLTLDRAAP 1421 Query: 829 TLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVI 888 TLSGGEAQR++LA L G Y+LDEPT GLH D LL L +L + GNT+VV+ Sbjct: 1422 TLSGGEAQRIRLAASLGAGLQG-VCYVLDEPTIGLHARDNAMLLGALRELAEAGNTVVVV 1480 Query: 889 EHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLK 937 EH+ + I+ A+ +VDLGP G GG ++ G V S T R L Sbjct: 1481 EHDEETIRAAEHLVDLGPGAGRHGGRVVAEGDLAAVTGNADSLTGRVLA 1529 Score = 157 bits (397), Expect = 2e-36, Method: Composition-based stats. Identities = 82/281 (29%), Positives = 122/281 (43%), Gaps = 54/281 (19%) Query: 353 KENIEFKYMNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREE-LAKF----------- 400 + +E + G+ + R + TE + +R A+F Sbjct: 1621 RRVLEVDQTPIGRTPRSCPATYVGIWDPIRRLFAGTEEARLRGWDAARFSFNTKGGRCEA 1680 Query: 401 ----------IS-----NRPCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNN 445 +S PC C GTR E R V + + +SI A FF+ Sbjct: 1681 CSGQGVKTVEMSFLPDVKVPCEVCGGTRFDEETRQVRYAGHSIDQVLALSIEEAQAFFSA 1740 Query: 446 LKLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQI---- 501 I L+ L +VGL YL+L + + TLSGGEAQR++L +++ Sbjct: 1741 HPR--------------IHHVLRLLCDVGLGYLSLGQPSPTLSGGEAQRLKLVTELAKAR 1786 Query: 502 --------GAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRA 553 +Y+LDEP++GLH D +RL L D G+TV+V+EH+ D I Sbjct: 1787 PVDGGPGRARQAAPTLYLLDEPTVGLHIADVQRLTDVFHALVDAGHTVVVIEHNLDVIAE 1846 Query: 554 ADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSG 594 ADHVID+GP G GG VV G EA+ A+ ++ TG+ + Sbjct: 1847 ADHVIDLGPEGGDAGGSVVGSGAPEAVAAM-DTPTGRALQA 1886 Score = 80.8 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 37/115 (32%), Positives = 57/115 (49%), Gaps = 11/115 (9%) Query: 3 KIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYAR 62 ++ V GA HNL+ +++ +P +LI VTG+SGSGKSSL + + R + R Sbjct: 1547 QLTVTGAHRHNLQQVDVALPLGRLIGVTGVSGSGKSSLVREVI-EPSVRALL------GR 1599 Query: 63 QFLSLMEKP----DVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFA 113 + + + +P V E L + ++Q PRS T I D +R LFA Sbjct: 1600 KRGAPVPEPVGCQAVAGTEHLRRVLEVDQTPIGRTPRSCPATYVGIWDPIRRLFA 1654 >UniRef50_B1ZV20 Excinuclease ABC, A subunit n=5 Tax=Bacteria RepID=B1ZV20_OPITP Length = 1995 Score = 900 bits (2325), Expect = 0.0, Method: Composition-based stats. Identities = 365/995 (36%), Positives = 522/995 (52%), Gaps = 66/995 (6%) Query: 2 DKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYA 61 + I +RG R +NLK +L +P + I VTGLSG+GKSSL FDTL+AEGQRRYVE+ SAY Sbjct: 13 ECIRLRGVRQNNLKGFDLDVPLGRYIAVTGLSGAGKSSLVFDTLHAEGQRRYVETFSAYT 72 Query: 62 RQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCP 121 RQFL L+ KP VD IE + P+I+IEQ +T RSTVGT+TE+ D+ ++ F+ V E P Sbjct: 73 RQFLDLLNKPKVDSIENIRPSIAIEQTNTVKTSRSTVGTMTELTDFFKVWFSHVAECFDP 132 Query: 122 DHDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARIDG 181 + + + + + +++ + K + L+NL +Q Y+R + Sbjct: 133 ETGEKVEDDNPQSIWAKTSAAHPNRAVIVAFKVTKPANLTWPEILQNLKAQSYVRVLLAA 192 Query: 182 EVCDLSDPPKLEL------------------QKKHTIEVVVDRFKVRDDLTQRLAESFET 223 +PP+L + VV DR + R E+ ET Sbjct: 193 AAAATRNPPQLHRLEDLLSASSDPATIHPQLSGASELFVVQDRITIAAAEKPRFLEAVET 252 Query: 224 ALELSGGTAVVADMDDPKAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGL 283 AL G + D AE FS P G + R P LFSFN+P GACP C G Sbjct: 253 ALHFGQGQVHLFAAD-GFAELGHFSRGLHSPKTGRTFRAATPALFSFNSPLGACPHCRGF 311 Query: 284 GVQQYFDPDRVIQNPELSLAGGAIRGWDRRNFYYFQM-LKSLADHYKFDVEAPWGSLSAN 342 G D + + LS+ G I+ W+ + + L + P+ SL+ Sbjct: 312 GRVIEIDYRLAVPDQSLSIDQGVIKCWESEIYGESKKDLYVFTKKKRIPTNVPFASLTPE 371 Query: 343 VHKVVLYGSGKENIEFKYMNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFIS 402 V+ G Y + G T + + GV K T VR LA++ + Sbjct: 372 QRDYVINGEPG------YGEENGKTWPQY--WYGVKGFFRWLEKNTYKMHVRVFLARYRA 423 Query: 403 NRPCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAE----- 457 PC +C G RL+ EA + LP + + + + + + Sbjct: 424 YNPCPACGGQRLQPEALCWKWQGRTLPDLYQLPVSDLLAQLASKAARHGHDTARKSDSRS 483 Query: 458 --KILKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEP 515 I RL++L VGL YLTL R + TLSGGE +R+ L S +G LV ++VLDEP Sbjct: 484 ETLAYDSIVTRLRYLEQVGLGYLTLDRQSRTLSGGEVERVNLTSCLGTSLVDTLFVLDEP 543 Query: 516 SIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEG 575 S+GLH RD +RL+ + L + GNTV+VVEHDE IRAADHVI++GP G GG +V EG Sbjct: 544 SVGLHPRDIDRLIAIIRTLTNAGNTVVVVEHDEAMIRAADHVIEVGPEPGGRGGHIVFEG 603 Query: 576 PLEAIMAVPESLTGQYMSGKRKIEVPKKRVPAN------------------PEKVLKLTG 617 + ++ ES+TG Y SG+ IE P +R P + + L T Sbjct: 604 TVSEMLRSRESVTGAYFSGRETIETPARRRPVSLGARASRPQSANAAAPSSSPQWLTFTD 663 Query: 618 ARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIA--QRQLNGATIAEPAPYRD 675 +NL +T LP+G F C++GVSGSGKSTL+++ ++ QR AE Sbjct: 664 VSKHNLAHLTFRLPLGRFVCLSGVSGSGKSTLLDNVIYQGLLTQRLQLAEDPAEIKAITP 723 Query: 676 IQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESRARGYTPGRFSFNV 735 F +++ +DQSP+ +TPRSNPA Y+ + +REL+A P ++ G+ FSFN Sbjct: 724 APDTAPFGELVLVDQSPLSKTPRSNPALYSEAWELIRELYARTPAAQEAGFNSSSFSFNS 783 Query: 736 RGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEE 795 GRCE CQG G +VEM FL D++VPC C G+R+ E L I++ G+++ ++L +I + Sbjct: 784 GEGRCEHCQGLGYERVEMQFLSDVFVPCPICDGRRFKPEVLAIQWNGRSVADLLATSIND 843 Query: 796 AREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLAREL----SKRGTGQ 851 A F P + R+L L VGL Y+ LGQ TLSGGE+QR+KL R L ++ Sbjct: 844 ALPLFTEHPEIHRRLAALETVGLGYLTLGQPLNTLSGGESQRLKLVRYLGDYTAQEVGSP 903 Query: 852 ------TLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADWIVDLG 905 L +LDEPTTGLH D+++LL VLH L D+G+++VVIEHNLDV+K+ADW++++G Sbjct: 904 YPNSAGALLLLDEPTTGLHRHDVKRLLSVLHALVDRGHSVVVIEHNLDVLKSADWLIEIG 963 Query: 906 PEGGSGGGEILVSGTPETVAECEASHTARFLKPML 940 P+ G+ GG I+ GTPE VA + T+ FL+ L Sbjct: 964 PDAGANGGRIVAEGTPEDVAAA-NTATSPFLRAAL 997 Score = 525 bits (1353), Expect = e-147, Method: Composition-based stats. Identities = 262/621 (42%), Positives = 354/621 (57%), Gaps = 82/621 (13%) Query: 402 SNRPCASCEGTRLRREARHVYVENT---------------------------PLPAISDM 434 + +PC C G RL R AR V + LP + Sbjct: 1367 AGQPCPECHGARLNRIARAVKLHFKAPGRRGRRAPARASQPSALNSQPTYALSLPELLTS 1426 Query: 435 SIGHAMEFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQR 494 + H + L L + I + I+ +I +RL+FL +VGL YL+L R ETLSGGEAQR Sbjct: 1427 TPAHLLAHLRELDLDARGRLITQDIIPQIEERLRFLDHVGLGYLSLERPTETLSGGEAQR 1486 Query: 495 IRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAA 554 IRLA+Q+G+ L GV+YVLDEPSIGLH RDN+RL+ TL LR+ GNT++VVEHD++ + A Sbjct: 1487 IRLAAQLGSNLSGVLYVLDEPSIGLHARDNDRLIETLQSLREKGNTLLVVEHDDELMERA 1546 Query: 555 DHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEVPKKRVPANPE---- 610 D +ID+GP AGVHGGE++A G I +SLTG ++ + + PA Sbjct: 1547 DRIIDLGPAAGVHGGELLANGTPAEIKRSAKSLTGLFLKKGIAHPLRGEYRPAMWHGRLA 1606 Query: 611 ------------------KVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLIND 652 + L+L GA NLK L LP+G + G SG+GKSTL D Sbjct: 1607 RVATRAKAKLTGGTPVPQQWLELRGALFRNLKGFDLRLPLGRLIMVAGPSGAGKSTLFRD 1666 Query: 653 TLFPIAQRQLNGATIAEPA-----------------------PYRDIQGLEHFDKVIDID 689 L P + + P+ +++G F +VI++D Sbjct: 1667 VLDPAVSFAIKEQKASLTGREFVKATGFVVADSHLSTLSTQLPFAELRGANGFKRVIEVD 1726 Query: 690 QSPIGRTPRSNPATYTGVFTPVRELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVI 749 QSPIG+TPRS PATY G+F +R+ FA +PE++ RGYT RFSFN GGRC C+G G I Sbjct: 1727 QSPIGKTPRSTPATYLGIFDLIRQFFASLPEAKIRGYTASRFSFNTTGGRCPTCEGAGRI 1786 Query: 750 KVEMHFLPDIYVPCDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARK 809 K+EM F+PD Y+PCD C G RY E +I +KGK+I EVL +T EEA +FFD LA+ Sbjct: 1787 KLEMAFMPDTYLPCDDCHGLRYGPELADITWKGKSIGEVLQLTFEEAAQFFDFHSQLAQV 1846 Query: 810 LQTLMDVGLTYIRLGQSATTLSGGEAQRVKLAREL----------SKRGTGQTLYILDEP 859 Q ++D GL Y+ LGQS+ TLSGGEAQR+KL EL S+ + LY+L+EP Sbjct: 1847 CQLMVDCGLGYLTLGQSSPTLSGGEAQRLKLVTELSAGLASYRERSRGERPRNLYLLEEP 1906 Query: 860 TTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSG 919 T GLH +D ++L+ VLH L DQG+T++VIEH+LD++ AD+IV+LGP GG GGE+L G Sbjct: 1907 TIGLHLSDCEKLIRVLHSLVDQGHTVIVIEHHLDLLAEADYIVELGPVGGPDGGELLYQG 1966 Query: 920 TPETVAECEASHTARFLKPML 940 + + S TA +L+ L Sbjct: 1967 ELAGLLKVRGSPTAPYLRAKL 1987 Score = 285 bits (729), Expect = 6e-75, Method: Composition-based stats. Identities = 124/323 (38%), Positives = 174/323 (53%), Gaps = 27/323 (8%) Query: 5 EVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQF 64 E+ GAR +NLKN+++ IP +L VVTG+SGSGKS+LAFD ++AEGQRR++ES+S YARQF Sbjct: 1037 EIEGARENNLKNLSVAIPHRQLSVVTGVSGSGKSTLAFDIVFAEGQRRFMESMSPYARQF 1096 Query: 65 LSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCPDHD 124 + + +P VD + G+ P ++IEQ+ T + +STV TITE+ YLRLL+AR+G P+ D Sbjct: 1097 VEQLPRPAVDRLTGIPPTVAIEQRVTRGSRKSTVATITEVAQYLRLLYARLGIQHHPETD 1156 Query: 125 VPLAAQTVSQ---MVDNVLSQPEGKR----LMLLAPIIKERKGEHTKTLENLASQGYIRA 177 P+ + +Q ++ VLS+ R L L AP+I+ RKG H +A+QGY Sbjct: 1157 QPVEPLSPAQLKSLLSRVLSENPKARKARHLYLCAPLIRGRKGHHQPIATWIANQGYELM 1216 Query: 178 RIDGEVCDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLA------------ESFETAL 225 R DG++ + KL+ ++H IEVVV K R AL Sbjct: 1217 RADGQLTRVDAFQKLDRYREHDIEVVVADLKTGS-PASRAKSKSSGSQLSAPSSRLSEAL 1275 Query: 226 ELSGGTAVVADMDDPKAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGV 285 L G+ + + FS G S EL+P+ FSFN+P G CPTC G G Sbjct: 1276 RLGKGSCFLLT--ERGEILSWFSTTRTDIHTGESFPELDPKHFSFNSPRGWCPTCRGHGR 1333 Query: 286 Q----QYFDPDRVIQNPELSLAG 304 D D +P L Sbjct: 1334 VFPWMLEPDED-AEDDPAARLRE 1355 Score = 226 bits (577), Expect = 2e-57, Method: Composition-based stats. Identities = 107/355 (30%), Positives = 164/355 (46%), Gaps = 54/355 (15%) Query: 404 RPCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEI 463 PC C+G R + E + + + SI A+ F EI Sbjct: 809 VPCPICDGRRFKPEVLAIQWNGRSVADLLATSINDALPLFTE--------------HPEI 854 Query: 464 GDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGA-----------GLVGVMYVL 512 RL L VGL YLTL + TLSGGE+QR++L +G G + +L Sbjct: 855 HRRLAALETVGLGYLTLGQPLNTLSGGESQRLKLVRYLGDYTAQEVGSPYPNSAGALLLL 914 Query: 513 DEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVV 572 DEP+ GLH+ D +RLL L L D G++V+V+EH+ D +++AD +I+IGP AG +GG +V Sbjct: 915 DEPTTGLHRHDVKRLLSVLHALVDRGHSVVVIEHNLDVLKSADWLIEIGPDAGANGGRIV 974 Query: 573 AEGPLEAIMAVPESLTGQYMSGKRKIEV----------------------PKKRVPANPE 610 AEG E + A + T ++ + E P + Sbjct: 975 AEGTPEDVAAA-NTATSPFLRAALEAESGGRTPELKAAESAARNGASALQPSTSNLNSIS 1033 Query: 611 KVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAEP 670 L++ GAR NNLK++++ +P + +TGVSGSGKSTL D +F QR+ + Sbjct: 1034 SSLEIEGARENNLKNLSVAIPHRQLSVVTGVSGSGKSTLAFDIVFAEGQRRFMESMSPYA 1093 Query: 671 APYRDIQGLEHFDKV------IDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVP 719 + + D++ + I+Q + +S AT T V +R L+A + Sbjct: 1094 RQFVEQLPRPAVDRLTGIPPTVAIEQRVTRGSRKSTVATITEVAQYLRLLYARLG 1148 Score = 172 bits (436), Expect = 7e-41, Method: Composition-based stats. Identities = 85/280 (30%), Positives = 121/280 (43%), Gaps = 65/280 (23%) Query: 723 ARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLP-----------------------DI 759 P FSFN G C C+G G + M D Sbjct: 1308 FPELDPKHFSFNSPRGWCPTCRGHGRVFPWMLEPDEDAEDDPAARLREFGIDSADDVSDA 1367 Query: 760 YVPCDQCKGKRYNRETLEIKYKGK---------------------------TIHEVLDMT 792 PC +C G R NR +K K ++ E+L T Sbjct: 1368 GQPCPECHGARLNRIARAVKLHFKAPGRRGRRAPARASQPSALNSQPTYALSLPELLTST 1427 Query: 793 IEEAREFFDA--------------VPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRV 838 +P + +L+ L VGL Y+ L + TLSGGEAQR+ Sbjct: 1428 PAHLLAHLRELDLDARGRLITQDIIPQIEERLRFLDHVGLGYLSLERPTETLSGGEAQRI 1487 Query: 839 KLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTA 898 +LA +L +G LY+LDEP+ GLH D +L++ L LR++GNT++V+EH+ ++++ A Sbjct: 1488 RLAAQLGSNLSG-VLYVLDEPSIGLHARDNDRLIETLQSLREKGNTLLVVEHDDELMERA 1546 Query: 899 DWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLKP 938 D I+DLGP G GGE+L +GTP + S T FLK Sbjct: 1547 DRIIDLGPAAGVHGGELLANGTPAEIKRSAKSLTGLFLKK 1586 Score = 76.6 bits (187), Expect = 5e-12, Method: Composition-based stats. Identities = 37/137 (27%), Positives = 61/137 (44%), Gaps = 17/137 (12%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTL------------YAEGQR 51 +E+RGA NLK +L +P +LI+V G SG+GKS+L D L + R Sbjct: 1627 LELRGALFRNLKGFDLRLPLGRLIMVAGPSGAGKSTLFRDVLDPAVSFAIKEQKASLTGR 1686 Query: 52 RYVESLS-----AYARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHD 106 +V++ ++ + + ++ G I ++Q PRST T I D Sbjct: 1687 EFVKATGFVVADSHLSTLSTQLPFAELRGANGFKRVIEVDQSPIGKTPRSTPATYLGIFD 1746 Query: 107 YLRLLFARVGEPRCPDH 123 +R FA + E + + Sbjct: 1747 LIRQFFASLPEAKIRGY 1763 Score = 71.9 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 37/121 (30%), Positives = 58/121 (47%), Gaps = 6/121 (4%) Query: 607 ANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGAT 666 + ++L G R NNLK L +P+G + +TG+SG+GKS+L+ DTL QR+ Sbjct: 9 RPAPECIRLRGVRQNNLKGFDLDVPLGRYIAVTGLSGAGKSSLVFDTLHAEGQRRYVETF 68 Query: 667 IAEPAPYRDIQGLEHFDKV------IDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPE 720 A + D+ D + I I+Q+ +T RS T T + + F+ V E Sbjct: 69 SAYTRQFLDLLNKPKVDSIENIRPSIAIEQTNTVKTSRSTVGTMTELTDFFKVWFSHVAE 128 Query: 721 S 721 Sbjct: 129 C 129 >UniRef50_Q7URK7 Excinuclease ABC subunit A n=1 Tax=Rhodopirellula baltica RepID=Q7URK7_RHOBA Length = 1031 Score = 900 bits (2325), Expect = 0.0, Method: Composition-based stats. Identities = 375/1003 (37%), Positives = 554/1003 (55%), Gaps = 85/1003 (8%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 63 I VRG R HNL+++++ IPR +L+V+ GLSGSGK+SLA DTLYAEGQR Y+ES SAY RQ Sbjct: 48 ISVRGCRVHNLRDVDVDIPRGELVVICGLSGSGKTSLALDTLYAEGQRSYIESFSAYTRQ 107 Query: 64 FLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCPDH 123 +L+ ++KPD D I G+ PAI++ + S RSTV T TEI ++LRLLFAR E C Sbjct: 108 YLNQLDKPDCDSISGIPPAIAVTRASAVKTNRSTVATSTEIAEHLRLLFARASELVCYQC 167 Query: 124 DVPLAAQTVSQMVDNVLS-QPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARIDGE 182 P+ + + + + +R ++ + + ++ L L +G++R + GE Sbjct: 168 GQPVVIDSPQSVAAQLSDPAAKVQRAIVGFELWLPDRKAASEILLGLQQEGFVRLILKGE 227 Query: 183 VCDLSDPPKLELQKK-----HTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVADM 237 LSD + ++ K+ T VVVDR ++ R ES ETA+ G AVV Sbjct: 228 TFQLSDEDRSKMAKRIGSKGVTATVVVDRLSSSSEM-SRWTESLETAMTEGNGRAVVLFQ 286 Query: 238 DDPKAE---------------ELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDG 282 D + + + S C C + PR F+FN+P GACP C+G Sbjct: 287 SDAEDRFKGLPTQSIDGREILQRVASDRQRCDHCDIEYPDPVPRAFNFNHPMGACPECEG 346 Query: 283 LGVQQYFDPDRVIQNPELSLAGGAIRGWDRRNFYY-FQMLKSLADHYKFDVEAPWGSLSA 341 G D DR++ + S+ GAI W+ ++ + + L +LAD Y V+ P+ SL Sbjct: 347 FGDVIGIDMDRIVPDKSKSIREGAIAPWNAPSYQHELEELLALADDYDLPVDVPFSSLKK 406 Query: 342 NVHKVVLYGSGKENIEFKYMNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFI 401 K++ G +R F G+ ++ +R +++ Sbjct: 407 KHLKLIHEG------------------VRERKFGGLNGFFAWLDRKKYKMHIRVFASRYR 448 Query: 402 SNRPCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNN---------------- 445 S R C +C G RL+ E+ V + + M +FF++ Sbjct: 449 SYRTCPACGGDRLKPESLAYKVGGHNVSEMLAMRCDELDQFFSDWFGADAENATATDATT 508 Query: 446 -------------------LKLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTLSRSAET 486 + +R IA + +++I DRL++L VGL YL L+R+ T Sbjct: 509 EGEIVGERLVGYQTQAELLIADQQRRHTIASEPVRQIRDRLRYLDQVGLGYLQLNRTLRT 568 Query: 487 LSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEH 546 LSGGE QRI L +G+ LVG++YVLDEP+ GLH D E+L+ + LRD GNTV+ VEH Sbjct: 569 LSGGETQRIALTLALGSTLVGMLYVLDEPTAGLHPIDVEQLVDAITQLRDRGNTVVAVEH 628 Query: 547 DEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEVP-KKRV 605 ++ I+ AD VI+IGPGAGV GG V EG + ++ +SLTG+Y+ RK + Sbjct: 629 NDTLIQLADRVIEIGPGAGVGGGLVTFEGTPKQLVKAKDSLTGRYLGKNRKRSIQLDLTD 688 Query: 606 PANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGA 665 P LKL+GA G+NL+D+ + P+G T +TG SGSGKS+LI+DTLF +L Sbjct: 689 GRAPTGSLKLSGASGHNLRDIDVEFPLGCLTVVTGRSGSGKSSLIHDTLFGAVSTRLAER 748 Query: 666 TIAEPA--------PYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAG 717 P+ P++ ++G D + +DQSPI R+PRS P T+ F P+R+ FA Sbjct: 749 RGEVPSADIVANTLPFQSLRGENAIDDCLLVDQSPISRSPRSCPVTFAKAFDPIRQAFAE 808 Query: 718 VPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLE 777 +++ R + PG FSFN G+C AC+G GV ++M FL D+ + C +C+G+RY E L+ Sbjct: 809 TVDAKIRNFKPGHFSFNSSAGQCSACEGAGVQTIDMQFLADVSMRCGECRGRRYRDEVLQ 868 Query: 778 IKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQR 837 ++Y+ TI +VL+MT+ EA EFF +P + KL+ L+DVGL Y+ LGQ ATTLS GEAQR Sbjct: 869 VRYRDCTIADVLEMTVREASEFFREMPKVQNKLKRLIDVGLDYVALGQPATTLSSGEAQR 928 Query: 838 VKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKT 897 +KLA L+ +TL+++DEPTTGLHF DI++LL L D+G+++VVIEH+ ++ Sbjct: 929 LKLAAFLAGSSKRRTLFLMDEPTTGLHFDDIRRLLKCFDALIDEGHSLVVIEHHPMLMAA 988 Query: 898 ADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLKPML 940 AD I+++GP GG+I+ SGT + VA S T + L+ ML Sbjct: 989 ADQIIEVGPGAAENGGQIVASGTRDEVASVNDSLTGQILRQML 1031 Score = 80.0 bits (196), Expect = 4e-13, Method: Composition-based stats. Identities = 49/202 (24%), Positives = 73/202 (36%), Gaps = 42/202 (20%) Query: 3 KIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYAR 62 +++ GA HNL++I++ P L VVTG SGSGKSSL DTL+ R E Sbjct: 695 SLKLSGASGHNLRDIDVEFPLGCLTVVTGRSGSGKSSLIHDTLFGAVSTRLAE------- 747 Query: 63 QFLSLMEKPDVDHIEGLSP--------AIS----IEQKSTSHNPRSTVGTITEIHDYLRL 110 E P D + P AI ++Q S +PRS T + D +R Sbjct: 748 ---RRGEVPSADIVANTLPFQSLRGENAIDDCLLVDQSPISRSPRSCPVTFAKAFDPIRQ 804 Query: 111 LFARVGEPR-----------------CPDHDVPLAAQTVSQMVDNV---LSQPEGKRLML 150 FA + + C + Q + +V + G+R Sbjct: 805 AFAETVDAKIRNFKPGHFSFNSSAGQCSACEGAGVQTIDMQFLADVSMRCGECRGRRYRD 864 Query: 151 LAPIIKERKGEHTKTLENLASQ 172 ++ R LE + Sbjct: 865 EVLQVRYRDCTIADVLEMTVRE 886 >UniRef50_C0ADS9 Excinuclease ABC, A subunit n=1 Tax=Opitutaceae bacterium TAV2 RepID=C0ADS9_9BACT Length = 1647 Score = 895 bits (2312), Expect = 0.0, Method: Composition-based stats. Identities = 358/1003 (35%), Positives = 534/1003 (53%), Gaps = 71/1003 (7%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 63 I +RG R +NLKN +L IP + VVTG+SG+GKSSL FDTL+AEGQRRYVE+ SAY RQ Sbjct: 25 IRLRGVRQNNLKNFDLDIPLGRYTVVTGVSGAGKSSLVFDTLHAEGQRRYVETFSAYTRQ 84 Query: 64 FLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCPDH 123 FL L++KP VD IE + P+I+IEQ +T RSTVGT+TE+ D+ ++ F+ P+ Sbjct: 85 FLELLDKPQVDSIENIRPSIAIEQTNTVKTSRSTVGTMTELTDFFKVWFSHTARCYDPET 144 Query: 124 DVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARI---- 179 + + + L++ + + K T+ L+NL +QGY R I Sbjct: 145 GEQVEDDNPQTIWQKTRAAHADATLVIAFRVTRPEKLSWTEILQNLQAQGYTRVLISTPS 204 Query: 180 ----------DGEVCDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSG 229 + LQ + V DR + D R E+ ETAL Sbjct: 205 GAGVPPATSAAVTAARIDALQPSTLQPSTFLHVAQDRLAITDAHRSRFLEAVETALHFGQ 264 Query: 230 GTAVVADMDDPKAEEL-LFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQY 288 G + + E+ +S P G + R P +FSFN+P GACP C G G Sbjct: 265 GQVHLFAENSGTFHEVGHYSRGLHSPKTGRTFRAATPAMFSFNSPLGACPACRGFGRVIE 324 Query: 289 FDPDRVIQNPELSLAGGAIRGWDRRNFYYFQM-LKSLADHYKFDVEAPWGSLSANVHKVV 347 D I + LS+ GAI+ + + + + L A +K P+ L+ + + Sbjct: 325 IDYRLAIPDQTLSIEDGAIKPFVGQVYSMSREDLIRAARRHKIPTRIPYAQLTEKQREFI 384 Query: 348 LYGSGKENIEFKYMNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCA 407 + G + + + G+ T VR L+++ + C+ Sbjct: 385 MLGEPE--YRARKARGEEIDYDTDDLWYGLKGFFNWLESTTYKMHVRVFLSRYRAYNLCS 442 Query: 408 SCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIA----------- 456 +C G RL+ EA + LP + + + + + A R Sbjct: 443 ACHGARLQPEALCWRWQGRTLPELYQLPVSELLAQLTQGREASPRPPSHVVDGNDSRQSL 502 Query: 457 ---------------------EKILKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRI 495 L+ I RL++L VGL YLTL R+++TLSGGE +R+ Sbjct: 503 ERSSGGLGEASLPGQPSAAPAALALESILSRLRYLRQVGLGYLTLDRTSKTLSGGEVERV 562 Query: 496 RLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAAD 555 L S +G LV ++VLDEPS+GLH RD +RL+ + L D GNTV+VVEHDE IRAAD Sbjct: 563 NLTSCLGTSLVDTLFVLDEPSVGLHPRDIDRLIAIIRTLTDAGNTVVVVEHDESMIRAAD 622 Query: 556 HVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEVP--KKRVPANPEKVL 613 HVI+IGP G GG VV +G +E ++A ++LTG+Y+S + +IE P ++ + P L Sbjct: 623 HVIEIGPEPGARGGHVVFQGSVEKLLAS-DALTGRYLSNRLRIETPTTRRPCASPPPPFL 681 Query: 614 KLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAEPAPY 673 +TG +NL+D+T+ LP+ ++GVSGSGKSTL+++ + + + +PA Sbjct: 682 TITGVTKHNLRDLTVKLPLRRLVALSGVSGSGKSTLLDNVIHQGLLAKRHQ-LTEDPAAI 740 Query: 674 RDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESRARGYTPGRFSF 733 + G + +++ +DQSP+ RTPRSN A YT + +R+L+A P ++A GYT FSF Sbjct: 741 ATLTGDDAIGEIVLVDQSPLSRTPRSNAALYTDAWELIRDLYAREPTAQAAGYTSSSFSF 800 Query: 734 NVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKYKGKTIHEVLDMTI 793 N GRCE CQG G +VEM FL D++VPC C+G+R+ E L I+++G ++ ++L+ + Sbjct: 801 NAGDGRCEHCQGLGFERVEMQFLSDVFVPCPICEGRRFKPEVLAIRWRGHSVADLLNTPV 860 Query: 794 EEAREFFDA-----------VPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLAR 842 ++A F A + +LQ L DVGL Y+ LGQ TLSGGE+QR+KL R Sbjct: 861 DDALALFAAAAADDAPNAKTHEKIHARLQPLADVGLGYLTLGQPLNTLSGGESQRLKLVR 920 Query: 843 EL-----SKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKT 897 L + + L +LDEPTTGLH D+++L+ VL +L D G++++VIEHNLDV+K+ Sbjct: 921 HLGNASGAAQTPTGALLLLDEPTTGLHRHDVKRLVGVLQRLVDAGHSVIVIEHNLDVLKS 980 Query: 898 ADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLKPML 940 ADW++++GPE GS GG I+ G PE +A+ + TA +L+ L Sbjct: 981 ADWLIEIGPEAGSDGGRIVAEGPPERIAQT-DTATATYLRAAL 1022 Score = 397 bits (1020), Expect = e-108, Method: Composition-based stats. Identities = 213/660 (32%), Positives = 304/660 (46%), Gaps = 104/660 (15%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 63 + + GAR +NLKN+ L IP +L VVTG+SGSGKS+LAFD ++AEGQRR++ES+S YARQ Sbjct: 1052 LTLIGARENNLKNLTLTIPHRQLSVVTGVSGSGKSTLAFDIVFAEGQRRFMESMSPYARQ 1111 Query: 64 FLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCPDH 123 F+ + +P +D + G+ P ++IEQ+ T + +STV TITE+ YLRLL+AR+G PD Sbjct: 1112 FVEQLPRPAIDRLTGIPPTVAIEQRITRGSRKSTVATITEVAQYLRLLYARLGIQHHPDT 1171 Query: 124 DVPLAAQTVSQ---MVDNVLSQPEGKR---LMLLAPIIKERKGEHTKTLENLASQGYIRA 177 D P+ + Q ++ + L+ P +R L L AP+++ RKG H + Q Y Sbjct: 1172 DRPVQPLSPGQLKKLLADTLATPAARRAKHLYLCAPLVRGRKGHHQPIATWIGKQNYELM 1231 Query: 178 RIDGEVCDLSDPPKLELQKKHTIEVVVDRFKV----RDDLTQRLAES------------F 221 R DG + KL+ K+H IE VV K+ +++ Sbjct: 1232 RADGRILLTDTFQKLDRYKEHDIEAVVADLKLATLANPKNQNSKSQNKNLPPAAAASAAL 1291 Query: 222 ETALELSGGTAVVADM-----DDPKAEELLFSANFACPICGYSMRELEPRLFSFNNPAGA 276 ALEL G+ +A FS G S EL+P+ FS N+P G Sbjct: 1292 TRALELGKGSCFLAIPATSSATGGSKILSWFSTTRTDIETGESFPELDPKHFSHNSPRGW 1351 Query: 277 CPTCDGLGVQQYFDPDRVIQNPELSLAGGAIRGW------DRRNFYYFQMLKSLADHYKF 330 CP C G G I W + + Sbjct: 1352 CPACRGHGR---------------------IYPWMLTAETADDDDRNSNDPAAQLRALGL 1390 Query: 331 DVEAPWGSLSANVHKVVLYGSGKENIEFKYMNDRGDTSIRRHPF--EGVLHN-MERRYKE 387 + + L+ G+ +N G+ + R Sbjct: 1391 ETDD---ELTDE-------GTPCPACHGDRLNRIARAVKLHFTTAAAGIPTFDVGRSMLN 1440 Query: 388 TESSAVREELA--KFISNRPCASCEG-TRLRREARHVYVENTPLPAISDMSIGHAMEFFN 444 SA R L+ + + P + T+L+ + R + I + F + Sbjct: 1441 VRRSAHRAALSLPQLLRATPAQLLKNLTQLKLDER-----GRRITQDIVPQIEERLRFLD 1495 Query: 445 NLKLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAG 504 +VGL YLTL R TLSGGEAQRIRLASQ+G Sbjct: 1496 ---------------------------HVGLGYLTLDRPTGTLSGGEAQRIRLASQLGTN 1528 Query: 505 LVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGA 564 L GV+YVLDEPSIGLH RDN+RL+ TL +LRD GNT++VVEHD++ + ADH+ID+GP A Sbjct: 1529 LAGVLYVLDEPSIGLHARDNDRLIETLKNLRDKGNTLLVVEHDDELMDHADHIIDLGPAA 1588 Query: 565 GVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEVPKKRVPANPEKVLKLTGARGNNLK 624 G+HGGE++AEG I SLTG ++ + I P + + + T + K Sbjct: 1589 GIHGGELLAEGTPADIKKNARSLTGLFL--AKGIPHPLRGTYRDLPPAPQTTPPGKHKTK 1646 Score = 230 bits (587), Expect = 2e-58, Method: Composition-based stats. Identities = 110/341 (32%), Positives = 167/341 (48%), Gaps = 29/341 (8%) Query: 404 RPCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEI 463 PC CEG R + E + + + + + A+ F ++I Sbjct: 828 VPCPICEGRRFKPEVLAIRWRGHSVADLLNTPVDDALALFAAAAADDAPNAKTH---EKI 884 Query: 464 GDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQI------GAGLVGVMYVLDEPSI 517 RL+ L +VGL YLTL + TLSGGE+QR++L + G + +LDEP+ Sbjct: 885 HARLQPLADVGLGYLTLGQPLNTLSGGESQRLKLVRHLGNASGAAQTPTGALLLLDEPTT 944 Query: 518 GLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPL 577 GLH+ D +RL+G L L D G++VIV+EH+ D +++AD +I+IGP AG GG +VAEGP Sbjct: 945 GLHRHDVKRLVGVLQRLVDAGHSVIVIEHNLDVLKSADWLIEIGPEAGSDGGRIVAEGPP 1004 Query: 578 EAIMAVPESLTGQYMSGKRKIEVPKKRVPANPEKVLK-------------LTGARGNNLK 624 E I ++ T Y+ + V R + + L GAR NNLK Sbjct: 1005 ERIAQT-DTATATYLRAALEEAVNVARASRPHDDAKRRPPPPPPPPAALTLIGARENNLK 1063 Query: 625 DVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAEPAPYRDIQGLEHFDK 684 ++TLT+P + +TGVSGSGKSTL D +F QR+ + + + D+ Sbjct: 1064 NLTLTIPHRQLSVVTGVSGSGKSTLAFDIVFAEGQRRFMESMSPYARQFVEQLPRPAIDR 1123 Query: 685 V------IDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVP 719 + + I+Q + +S AT T V +R L+A + Sbjct: 1124 LTGIPPTVAIEQRITRGSRKSTVATITEVAQYLRLLYARLG 1164 Score = 169 bits (427), Expect = 6e-40, Method: Composition-based stats. Identities = 89/285 (31%), Positives = 122/285 (42%), Gaps = 70/285 (24%) Query: 723 ARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHF--------------------------- 755 P FS N G C AC+G G I M Sbjct: 1335 FPELDPKHFSHNSPRGWCPACRGHGRIYPWMLTAETADDDDRNSNDPAAQLRALGLETDD 1394 Query: 756 -LPDIYVPCDQCKGKRYNRETLEIKY-------------KGKTIHEV--------LDMT- 792 L D PC C G R NR +K G+++ V L + Sbjct: 1395 ELTDEGTPCPACHGDRLNRIARAVKLHFTTAAAGIPTFDVGRSMLNVRRSAHRAALSLPQ 1454 Query: 793 -----------------IEEAREFF--DAVPALARKLQTLMDVGLTYIRLGQSATTLSGG 833 ++E D VP + +L+ L VGL Y+ L + TLSGG Sbjct: 1455 LLRATPAQLLKNLTQLKLDERGRRITQDIVPQIEERLRFLDHVGLGYLTLDRPTGTLSGG 1514 Query: 834 EAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLD 893 EAQR++LA +L G LY+LDEP+ GLH D +L++ L LRD+GNT++V+EH+ + Sbjct: 1515 EAQRIRLASQLGTNLAG-VLYVLDEPSIGLHARDNDRLIETLKNLRDKGNTLLVVEHDDE 1573 Query: 894 VIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLKP 938 ++ AD I+DLGP G GGE+L GTP + + S T FL Sbjct: 1574 LMDHADHIIDLGPAAGIHGGELLAEGTPADIKKNARSLTGLFLAK 1618 Score = 72.3 bits (176), Expect = 9e-11, Method: Composition-based stats. Identities = 38/132 (28%), Positives = 59/132 (44%), Gaps = 6/132 (4%) Query: 593 SGKRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLIND 652 S K ++L G R NNLK+ L +P+G +T +TGVSG+GKS+L+ D Sbjct: 5 SAKSTRTTQSAPATPPAPDAIRLRGVRQNNLKNFDLDIPLGRYTVVTGVSGAGKSSLVFD 64 Query: 653 TLFPIAQRQLNGATIAEPAPYRDIQGLEHFDKV------IDIDQSPIGRTPRSNPATYTG 706 TL QR+ A + ++ D + I I+Q+ +T RS T T Sbjct: 65 TLHAEGQRRYVETFSAYTRQFLELLDKPQVDSIENIRPSIAIEQTNTVKTSRSTVGTMTE 124 Query: 707 VFTPVRELFAGV 718 + + F+ Sbjct: 125 LTDFFKVWFSHT 136 >UniRef50_Q2T972 Excinuclease ABC, subunit A, form 2 n=56 Tax=Bacteria RepID=Q2T972_BURTA Length = 2021 Score = 892 bits (2305), Expect = 0.0, Method: Composition-based stats. Identities = 369/1001 (36%), Positives = 532/1001 (53%), Gaps = 87/1001 (8%) Query: 2 DKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYA 61 + I +RGAR HNLK+I+L + ++ VVTG SGSGKSSL FDTLYAEGQRRYVE+ SAYA Sbjct: 55 NLIRIRGARQHNLKHIDLDLRTGEMTVVTGPSGSGKSSLVFDTLYAEGQRRYVETFSAYA 114 Query: 62 RQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCP 121 RQFL M++P V+ ++G+ PAI+I+Q + + RSTVGT+TE++D+L+LL+AR E Sbjct: 115 RQFLDRMDRPQVERVDGVPPAIAIDQTNPVRSSRSTVGTMTELNDHLKLLYARAAELFDR 174 Query: 122 DHDVPLAAQTVSQMVDNVLSQ--PEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARI 179 + T + ++L++ R+ + + + + L++ GY R + Sbjct: 175 RTARLVRHDTPETIYADLLARTKEHDPRIAITFAVELPETATDDEVEQWLSASGYTRVQA 234 Query: 180 DGEVCDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVADMDD 239 EV + P K+ ++VV DRF++ R E+ E +L+ GG V + Sbjct: 235 RREVASPTGPRKV-------LDVVADRFRLHQVDKARAIEAIEASLKRGGGRVNVYVLAQ 287 Query: 240 ---------PKAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFD 290 +++ +S P + + LFSFN+ GAC C G G D Sbjct: 288 VPENANDAAAQSQVWRYSTGLHDPDSDLRYADPQAALFSFNSAYGACEACRGFGRVIGVD 347 Query: 291 PDRVIQNPELSLAGGAIRGWDRRNFYYFQ-MLKSLADHYKFDVEAPWGSLSANVHKVVLY 349 VI + +L GGAI+ + Q L A + PW L+ + V+ Sbjct: 348 LGLVIPDARKTLRGGAIKPMQTPAWKECQDDLMRYAAKANIRRDTPWAELTPDEQDWVIN 407 Query: 350 GSGKENIEFKYMNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASC 409 GS N +++ + GV + +R L+K+ S PCA C Sbjct: 408 GSPDWNGKWQSQ------------WYGVKRFFGYLESKAYKMHIRVLLSKYRSYTPCAVC 455 Query: 410 EGTRLRREARHVYVE-------------------------------NTPLPAISDMSIGH 438 G RL+ E+ + + + + I Sbjct: 456 GGARLKTESLLWRLGTKANADAVLASADRFMPRGVEWTRAQLEALPGLTVHDLMLLPIER 515 Query: 439 AMEFFNNLKL-AGQRAKIAEKILKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRL 497 FF+++ L + + +L E+ RLK+L +VGL YLTL R + TLSGGE QRI L Sbjct: 516 IRRFFDDVSLPSALLDDALKLLLAEVRTRLKYLCDVGLGYLTLDRQSRTLSGGEVQRINL 575 Query: 498 ASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHV 557 + +G L ++VLDEPSIGLH RD R++ + LRD GNT++VVEHD + AAD + Sbjct: 576 TTALGTSLTKTLFVLDEPSIGLHPRDLNRIVEAMQRLRDAGNTLVVVEHDPSVMLAADRL 635 Query: 558 IDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEVPK---KRVPANPEKVLK 614 ID+GPG G GG +V +G I +LTG+Y+ G++++ +R + Sbjct: 636 IDMGPGPGERGGTIVYDGTPGDI-RSAHTLTGEYLGGRKQVAHASHWVRRPVDARTPRIV 694 Query: 615 LTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAEPAPYR 674 L GA +NL+DVT+ +P+ C+TGVSGSGKSTL+ D L+P R G P +R Sbjct: 695 LEGASEHNLRDVTVEIPLQRLVCVTGVSGSGKSTLLQDVLYPAMARHF-GKATESPGAHR 753 Query: 675 DIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESRARGYTPGRFSFN 734 + G E V+ +DQSPIG+T RSNPA+Y G F +R+LFA P + RGY G FSFN Sbjct: 754 GLMGAEQVGDVVFVDQSPIGKTTRSNPASYVGAFDEIRKLFAKAPLALQRGYGAGTFSFN 813 Query: 735 VRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKY----KGKTIHEVLD 790 GRC C G G +EM FL D+Y+ C C G+RY E L+++ + ++ +VL+ Sbjct: 814 SGDGRCPTCGGSGFEHIEMQFLSDVYLRCPDCDGRRYRAEILDVRIERGGRALSVADVLE 873 Query: 791 MTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSK---- 846 +T+ EA F A + R LQ ++DVGL Y++LGQ TLSGGEAQR+KLA L++ Sbjct: 874 LTVSEAAACFAADAEVLRVLQPIVDVGLEYVKLGQPVPTLSGGEAQRLKLAGFLAESAKA 933 Query: 847 -----------RGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVI 895 R L++ DEPTTGLHF DI +L+ KL G++++VIEHNLDVI Sbjct: 934 GNGRRVVTQEARVARARLFMFDEPTTGLHFDDIAKLMRAFGKLLAAGHSLIVIEHNLDVI 993 Query: 896 KTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFL 936 + ADW++DLGPEGG GGG +L +GTP+ V C SHT L Sbjct: 994 RAADWLIDLGPEGGDGGGLVLCAGTPDDVKACAGSHTGAAL 1034 Score = 741 bits (1914), Expect = 0.0, Method: Composition-based stats. Identities = 386/1016 (37%), Positives = 537/1016 (52%), Gaps = 161/1016 (15%) Query: 2 DKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYA 61 D + + AR HNLK++++ IP K VVTG+SGSGKS+LAFD L+ EGQRRY+ESL+AYA Sbjct: 1071 DVVRIVNAREHNLKSLDVDIPHGKFNVVTGVSGSGKSTLAFDILFHEGQRRYLESLNAYA 1130 Query: 62 RQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCP 121 R + +P+VD + G+ P ++IEQ+ + +STV T +E+ +LRLL+ ++G C Sbjct: 1131 RSIVQPAGRPEVDAVYGIPPTVAIEQRLSRGGRKSTVATTSEVWHFLRLLYVKLGLQHCI 1190 Query: 122 DHDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARIDG 181 P+ +QTV +V +L G+ + LLAP++ RKG +T + ++G R+DG Sbjct: 1191 HDGAPVTSQTVESIVAQLLRDHRGEHVGLLAPLVVNRKGVYTDLAKWAKARGNTHLRVDG 1250 Query: 182 EVCDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVADMDDPK 241 E + PKL+ ++HTIE+ V V + L + + LEL G + D Sbjct: 1251 EFVTVDPWPKLDRFREHTIELPVADLVVSPENEAGLRQRLDETLELGKGVMHLLAPLDGL 1310 Query: 242 -------------AEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQY 288 E + S ACP+CG S EL+PR+FS+N+ G C TC G G+ Sbjct: 1311 SHAMANRLSTARVGEIKVLSVKRACPVCGTSYPELDPRMFSYNSKHGWCATCVGTGLA-- 1368 Query: 289 FDPDRVIQNPELSLAGGAIRGWDRRNFYYFQMLKSLADHYKFDVEAPWGSLSANVHKVVL 348 L+ A Y +L + +L ++ + Sbjct: 1369 -----------LTREQRA--------AYDDTVLAEDGRGRE-------QALPSDEQEP-- 1400 Query: 349 YGSGKENIEFKYMNDRGDTSIRRHPFE--GVLHNMERRYKETESSAVREELAKFISNRPC 406 G G E R + S R F+ ++ + +T R + Sbjct: 1401 EGVGDEPCP-DCGGTRLNPSARAVTFDRHSIVDVAQWTVSDT-----RRWI--------- 1445 Query: 407 ASCEGTRLRREARHVYVENTP--LPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIG 464 +G RL + IG + F + L Sbjct: 1446 ---DGLRL---------AGRDAQIARDIVGEIGSRLAFLEEVGL---------------- 1477 Query: 465 DRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDN 524 YL+L R+A +LSGGEAQRIRLA+Q+G+ L GV YVLDEP+IGLH RDN Sbjct: 1478 -----------GYLSLDRAAPSLSGGEAQRIRLAAQLGSNLQGVCYVLDEPTIGLHPRDN 1526 Query: 525 ERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVP 584 + LL L L D GNT++VVEHDED IR ADH+IDIGPGAG GG +VA+G + + A P Sbjct: 1527 QILLDALRKLGDKGNTLVVVEHDEDTIRRADHIIDIGPGAGKRGGALVAQGGVADLSAQP 1586 Query: 585 ESLTGQYMSGKRKIEVPKKRV---------PANPEKVLKLTGARGNNLKDVTLTLPVGLF 635 S+TG+ ++ + +R PA P+ L + GA +NL+ VT+ +P+ Sbjct: 1587 ASVTGRLLAQPMTHPLQPRRSVNPPGKRNGPAVPQTWLTVHGALLHNLRGVTVGIPLARL 1646 Query: 636 TCITGVSGSGKSTLINDTLFPIAQRQLNGATIAEPAPYR--------------------- 674 +TGVSGSGKSTL D L + + ++ PA R Sbjct: 1647 VAVTGVSGSGKSTLARDVLMTNLLDAVGRSVLSSPATRRARKAAQQQAPQAAQVTKGRAS 1706 Query: 675 ---------------------DIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRE 713 I G E D+V+++DQ+PIG+TPRS PATY GV+ +R Sbjct: 1707 VLARSAPRPALNVTHAWQGCESISGWEQIDRVLEVDQTPIGKTPRSCPATYIGVWDTIRR 1766 Query: 714 LFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNR 773 LFA E+RARGYT RFSFN GRC AC+G GV + M FLPD+ VPCD C G+R+N Sbjct: 1767 LFADTLEARARGYTASRFSFNTGEGRCPACEGQGVRTIGMSFLPDVKVPCDVCHGQRFNP 1826 Query: 774 ETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGG 833 ETL + ++G+ I +VL M I+EA EFF + +A LQ + DVGL Y+ LGQ + TLSGG Sbjct: 1827 ETLAVTWRGRNIGDVLTMEIDEAVEFFAPISNIAHPLQLMKDVGLGYLTLGQPSPTLSGG 1886 Query: 834 EAQRVKLARELSK---------RGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNT 884 EAQR+KL ELSK + TLY+LDEPT GLH AD+ +L+ VLH+L D G++ Sbjct: 1887 EAQRIKLVTELSKVRDDITRRGQKAPHTLYVLDEPTVGLHMADVAKLIRVLHRLVDAGHS 1946 Query: 885 IVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLKPML 940 +VVIEH+LDVI ADWI+DLGPEGG+GGG I+ + PE + + ASHT R L+P+L Sbjct: 1947 VVVIEHDLDVIAEADWIIDLGPEGGAGGGAIVAAAPPEALVKAGASHTGRALEPVL 2002 Score = 183 bits (465), Expect = 2e-44, Method: Composition-based stats. Identities = 121/502 (24%), Positives = 194/502 (38%), Gaps = 78/502 (15%) Query: 403 NRPCASCEGTRLRREARHVYV-ENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILK 461 C C+G R R E V + G A+ + L+L A Sbjct: 839 YLRCPDCDGRRYRAEILDVRIERG-----------GRALSVADVLELTVSEAAACFAADA 887 Query: 462 EIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGL---------------- 505 E+ L+ +V+VGL Y+ L + TLSGGEAQR++LA + Sbjct: 888 EVLRVLQPIVDVGLEYVKLGQPVPTLSGGEAQRLKLAGFLAESAKAGNGRRVVTQEARVA 947 Query: 506 VGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAG 565 +++ DEP+ GLH D +L+ L G+++IV+EH+ D IRAAD +ID+GP G Sbjct: 948 RARLFMFDEPTTGLHFDDIAKLMRAFGKLLAAGHSLIVIEHNLDVIRAADWLIDLGPEGG 1007 Query: 566 VHGGEVVAEGPLEAIMAVPESLTGQYMSG------------------KRKIEVPKKRVPA 607 GG V+ G + + A S TG + + + + R Sbjct: 1008 DGGGLVLCAGTPDDVKACAGSHTGAALLHYDRAMGAEAELAEQGAPLQAVLSAARARRAI 1067 Query: 608 NPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATI 667 E V+++ AR +NLK + + +P G F +TGVSGSGKSTL D LF QR+ + Sbjct: 1068 EGEDVVRIVNAREHNLKSLDVDIPHGKFNVVTGVSGSGKSTLAFDILFHEGQRRYLESLN 1127 Query: 668 AEPAPYRDIQGLEHFDKV------IDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPES 721 A G D V + I+Q +S AT + V+ +R L+ + Sbjct: 1128 AYARSIVQPAGRPEVDAVYGIPPTVAIEQRLSRGGRKSTVATTSEVWHFLRLLYVKLGLQ 1187 Query: 722 RARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDI-------------YVPCDQCKG 768 S V A + L + + Sbjct: 1188 HCIHDGAPVTSQTVE--SIVAQLLRDHRGEHVGLLAPLVVNRKGVYTDLAKWAKARGNTH 1245 Query: 769 KRYNRETLEI-------KYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYI 821 R + E + + +++ TI ++ + + + L ++L +++G + Sbjct: 1246 LRVDGEFVTVDPWPKLDRFREHTI----ELPVADLVVSPENEAGLRQRLDETLELGKGVM 1301 Query: 822 RLGQSATTLSGGEAQRVKLARE 843 L LS A R+ AR Sbjct: 1302 HLLAPLDGLSHAMANRLSTARV 1323 Score = 85.0 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 39/146 (26%), Positives = 64/146 (43%), Gaps = 6/146 (4%) Query: 581 MAVPESLTGQYMSGKRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITG 640 + + ++ + ++++ GAR +NLK + L L G T +TG Sbjct: 25 AHRAGEPLAAFRLPRTLANSFRRAGKLSSSNLIRIRGARQHNLKHIDLDLRTGEMTVVTG 84 Query: 641 VSGSGKSTLINDTLFPIAQRQLNGATIAEPAPYRDIQGLEHFDKV------IDIDQSPIG 694 SGSGKS+L+ DTL+ QR+ A + D ++V I IDQ+ Sbjct: 85 PSGSGKSSLVFDTLYAEGQRRYVETFSAYARQFLDRMDRPQVERVDGVPPAIAIDQTNPV 144 Query: 695 RTPRSNPATYTGVFTPVRELFAGVPE 720 R+ RS T T + ++ L+A E Sbjct: 145 RSSRSTVGTMTELNDHLKLLYARAAE 170 >UniRef50_B5JNR8 Excinuclease ABC, A subunit, putative n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JNR8_9BACT Length = 1476 Score = 889 bits (2298), Expect = 0.0, Method: Composition-based stats. Identities = 371/1023 (36%), Positives = 543/1023 (53%), Gaps = 99/1023 (9%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 63 I +RG R +NLKNI++ IP K I VTGLSG+GKSSL FDTL+AEGQRRYVE+ SAY RQ Sbjct: 12 IRLRGVRQNNLKNIDVDIPLGKFIAVTGLSGAGKSSLVFDTLHAEGQRRYVETFSAYTRQ 71 Query: 64 FLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCPDH 123 FL L+EKPD+D E + P+I+IEQK+T RSTVGT+TE+ D+ ++ F+ V P Sbjct: 72 FLDLLEKPDLDSAENVRPSIAIEQKNTIKTSRSTVGTMTELTDFFKVWFSHVAALYDPVT 131 Query: 124 DVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARIDGEV 183 + + + L+ + + L + K K + L+N+ +QGY R Sbjct: 132 NEQIHDDNPITIWQKSLATYSKQTVTLAFQVTKPEKLTWPEILKNIKAQGYSRLY--QTT 189 Query: 184 CDLSDPPKLEL------------QKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGT 231 + P+L T+ VV DR ++ + R E+ ETALE G Sbjct: 190 PKSASAPQLHRIETISEDSCNSWADNTTLHVVQDRIQLFNTNRSRFLEAAETALEFGQGQ 249 Query: 232 AVVADMDDPKAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDP 291 ++ +D S P G + R P LFSFN+P GACP C G G D Sbjct: 250 LLL--LDKNGDTLARHSRGLHSPTSGKTYRPASPPLFSFNSPIGACPKCRGFGRVIEIDY 307 Query: 292 DRVIQNPELSLAGGAIRGWDRRNFYYFQM-LKSLADHYKFDVEAPWGSLSANVHKVVLYG 350 I + S+A G I+ ++ + + + L K P+ L+ V+ G Sbjct: 308 RLAIPDTNKSIADGLIKPFEGQVYGESKNDLVRACKRLKIFTTKPFNKLTQRQQDNVILG 367 Query: 351 SGKENIEFKYMNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCE 410 S + GV + + T VR L+++ + C C+ Sbjct: 368 EPA-------YRKLPPGSESDGLWYGVKGFFDWLERNTYKMHVRIFLSRYRAYVKCPDCQ 420 Query: 411 GTRLRREARHVYVENTPLPAISDMSIGHAMEFFNN---LKLAGQRAKIAEKILK------ 461 GTRL+ ++ + LP + + + + + A Q K I + Sbjct: 421 GTRLQPDSLCWKWQGYRLPDLYQLPVDQLLHLIESSQPKTQAPQTQKARNPIREDSSDSW 480 Query: 462 ----------------------------EIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQ 493 I RL++L +VGL YLTL+RSA TLSGGE + Sbjct: 481 AKNPLPSGATLEEFRDETPNHQATIASDAILSRLRYLDHVGLGYLTLNRSARTLSGGEVE 540 Query: 494 RIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRA 553 R+ L S +GA LV ++VLDEPS+GLH RD +RL+ + L D GNTV++VEHD+ IRA Sbjct: 541 RVNLTSCLGASLVDTLFVLDEPSVGLHARDIDRLIHIVRTLTDAGNTVVLVEHDDAMIRA 600 Query: 554 ADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEVP------------ 601 ADHVI+IGP G GG +V +G ++ +S+TGQY+SGK++I VP Sbjct: 601 ADHVIEIGPQPGAAGGHLVFQGTQAQLLKSRKSITGQYLSGKKQIPVPTQTRSVGSDLVS 660 Query: 602 ---------KKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLIND 652 + R + E L +T A +N++D++L++P+ F C++GVSGSGKSTL+N Sbjct: 661 RSTSTSSKARTRHSSKSEGGLHITSASKHNIQDLSLSIPLQRFVCLSGVSGSGKSTLLNA 720 Query: 653 TLFPIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVR 712 L+ Q G +PA + F+++ +DQSP+ RTPRSNP + + +R Sbjct: 721 VLYQNLIAQ-RGLIAEDPASVASLTTDLPFEEITLVDQSPVSRTPRSNPVVFVEAWDHIR 779 Query: 713 ELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYN 772 L+ +P+S GYT FSFN GRCE C+G G K+EM FL D+YVPC C GKR+ Sbjct: 780 TLYGKLPQSVENGYTASSFSFNAGDGRCEPCKGLGYEKIEMQFLSDVYVPCPHCDGKRFK 839 Query: 773 RETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSG 832 E LEI ++G I ++LD+TI++ + F+A P + KL L +VGL Y++ GQ TLSG Sbjct: 840 SELLEITHEGYNISQLLDLTIDQLLKLFEAYPKIHSKLAALEEVGLGYLKSGQPLNTLSG 899 Query: 833 GEAQRVKLARELSK---------------RGTGQTLYILDEPTTGLHFADIQQLLDVLHK 877 GE+QR+KL + LS + + +L +LDEPTTGLH D+++LL VL K Sbjct: 900 GESQRLKLVKYLSSSTRVNDSTHHSPLTTQNSTGSLILLDEPTTGLHKHDVRRLLTVLQK 959 Query: 878 LRDQGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLK 937 + D G++++VIEHN+DV+K+ADW++++GPE G+ GG+++ GTPET + TA++L+ Sbjct: 960 IVDSGHSLIVIEHNIDVLKSADWLIEMGPEAGAKGGQVVFQGTPET-CAQTTTETAKYLQ 1018 Query: 938 PML 940 P Sbjct: 1019 PEF 1021 Score = 244 bits (624), Expect = 9e-63, Method: Composition-based stats. Identities = 106/251 (42%), Positives = 153/251 (60%), Gaps = 10/251 (3%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 63 + V GAR HNLKNI + IP + VVTG SGSGKS+LAFD ++ EGQRR++ES+S YARQ Sbjct: 1068 LTVTGARHHNLKNITVSIPHYEFTVVTGASGSGKSTLAFDIVFGEGQRRFMESMSPYARQ 1127 Query: 64 FLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCPDH 123 F+ + +PD+D + G+ P ++IEQ+ T + +STV TITE+ YLRLL++R+G P PD Sbjct: 1128 FVEQLPRPDLDQLTGIQPTVAIEQRVTRGSRKSTVATITEVAQYLRLLYSRLGIPHNPDS 1187 Query: 124 DVPLAAQTVSQM---VDNVLSQPEGKR---LMLLAPIIKERKGEHTKTLENLASQGYIRA 177 PL +QT +++ + +++ PE K+ L LLAP+I+ RKG H +A GY Sbjct: 1188 GAPLISQTETEIQKRLQKIITSPEAKKAKHLFLLAPLIRNRKGHHQPIANWIADHGYEMM 1247 Query: 178 RIDGEVCDLSDPPKLELQKKHTIEVVVDRFK----VRDDLTQRLAESFETALELSGGTAV 233 R+DG++ D KL+ K+H IEVV+ K ++ + AL GTA+ Sbjct: 1248 RVDGKLIFTDDFKKLDRYKEHNIEVVIADLKPLTGSGRSPIGQINRHLKEALHRGKGTAL 1307 Query: 234 VADMDDPKAEE 244 V D + E Sbjct: 1308 VVFDDKVVSSE 1318 Score = 208 bits (530), Expect = 8e-52, Method: Composition-based stats. Identities = 100/382 (26%), Positives = 162/382 (42%), Gaps = 67/382 (17%) Query: 403 NRPCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKE 462 PC C+G R + E + E + + D++I ++ F + Sbjct: 827 YVPCPHCDGKRFKSELLEITHEGYNISQLLDLTIDQLLKLFE--------------AYPK 872 Query: 463 IGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLV---------------- 506 I +L L VGL YL + TLSGGE+QR++L + + Sbjct: 873 IHSKLAALEEVGLGYLKSGQPLNTLSGGESQRLKLVKYLSSSTRVNDSTHHSPLTTQNST 932 Query: 507 GVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGV 566 G + +LDEP+ GLH+ D RLL L + D G+++IV+EH+ D +++AD +I++GP AG Sbjct: 933 GSLILLDEPTTGLHKHDVRRLLTVLQKIVDSGHSLIVIEHNIDVLKSADWLIEMGPEAGA 992 Query: 567 HGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEV-------------------------- 600 GG+VV +G E + T +Y+ + Sbjct: 993 KGGQVVFQGTPETCAQT-TTETAKYLQPEFDSRTQISNLKSEIPNPTLLAAEAKSSYNSN 1051 Query: 601 ----PKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFP 656 P L +TGAR +NLK++T+++P FT +TG SGSGKSTL D +F Sbjct: 1052 SPLTPHSSPLDGQSSALTVTGARHHNLKNITVSIPHYEFTVVTGASGSGKSTLAFDIVFG 1111 Query: 657 IAQRQLNGATIAEPAPYRDIQGLEHFDKV------IDIDQSPIGRTPRSNPATYTGVFTP 710 QR+ + + + D++ + I+Q + +S AT T V Sbjct: 1112 EGQRRFMESMSPYARQFVEQLPRPDLDQLTGIQPTVAIEQRVTRGSRKSTVATITEVAQY 1171 Query: 711 VRELFAGVPESRARGYTPGRFS 732 +R L++ + S Sbjct: 1172 LRLLYSRLGIPHNPDSGAPLIS 1193 Score = 72.7 bits (177), Expect = 6e-11, Method: Composition-based stats. Identities = 36/120 (30%), Positives = 58/120 (48%), Gaps = 6/120 (5%) Query: 603 KRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQL 662 +N ++L G R NNLK++ + +P+G F +TG+SG+GKS+L+ DTL QR+ Sbjct: 2 PTAASNKPTAIRLRGVRQNNLKNIDVDIPLGKFIAVTGLSGAGKSSLVFDTLHAEGQRRY 61 Query: 663 NGATIAEPAPYR------DIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFA 716 A + D+ E+ I I+Q +T RS T T + + F+ Sbjct: 62 VETFSAYTRQFLDLLEKPDLDSAENVRPSIAIEQKNTIKTSRSTVGTMTELTDFFKVWFS 121 >UniRef50_A9G6R8 Excinuclease ABC subunit A n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9G6R8_SORC5 Length = 1781 Score = 888 bits (2296), Expect = 0.0, Method: Composition-based stats. Identities = 364/950 (38%), Positives = 518/950 (54%), Gaps = 43/950 (4%) Query: 1 MDKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAY 60 M I +RGARTHNL+ I+L +L+ + G+SG+GKSSLA DTLY+EGQRR+VES S Y Sbjct: 1 MHSICLRGARTHNLQGIDLDFRPGELVAIAGVSGAGKSSLALDTLYSEGQRRFVESFSPY 60 Query: 61 ARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRC 120 ARQFL +E+P + +E ++ +++++++ + RSTV T+ ++ Y LFAR P C Sbjct: 61 ARQFLERLERPPIGALEPVAAGVAVDRRAPVKSSRSTVATMADLEPYFCALFAREAVPVC 120 Query: 121 PDHDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARID 180 P + P A ++ D S EG ++ PI E+L + GY R + Sbjct: 121 PSCEAPAARTDPARAADLAASAHEGATALVTYPIAVAGTERFLDVRESLLAAGYRRLLVR 180 Query: 181 GEVCDLSDP-PKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVADMDD 239 GE D+ P + +EV+VDR +V +RL + E A + SGG A + Sbjct: 181 GEARDIDTVAPSEAMSGADKVEVIVDRVRVAPRERRRLGAAIEEAWKGSGGDASLHLQRK 240 Query: 240 PKAE--------ELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDP 291 + L ACP C + P LFS+ +P GACP+C G G D Sbjct: 241 ADEQGGQGAGPTRLRLVRGLACPSCARAFDPPRPGLFSYQSPTGACPSCRGFGRTLGIDY 300 Query: 292 DRVIQNPELSLAGGAIRGWDRRNF-YYFQMLKSLADHYKFDVEAPWGSLSANVHKVVLYG 350 D+VI +P S+AGGAIR W+ R+ + ++L++ + + PW LS +VL G Sbjct: 301 DKVIPDPSKSIAGGAIRPWNGRSTTWERKLLRAFCERNGIRTDKPWRDLSDAQRALVLEG 360 Query: 351 SGKENIEFKYMNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCE 410 G + + GV T VR LA++ + C++C Sbjct: 361 EGSW---------------TQGKYPGVKAWFRWLETRTYKMHVRVLLARYRTYDVCSACN 405 Query: 411 GTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDRLKFL 470 G RL E+ V L A ++ + A + E +E+ RL +L Sbjct: 406 GKRLAPESLLYRVGGLDLAAWHELELRDARARLEA---ERPQTGQGEMARRELIARLGYL 462 Query: 471 VNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGT 530 VGL YL+L+R A TLSGGEAQR+ L + +G L G ++VLDEP++GLH D L+ Sbjct: 463 ERVGLGYLSLARQARTLSGGEAQRVALTAALGTSLTGALFVLDEPTVGLHPTDIPPLIAA 522 Query: 531 LIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQ 590 + L D GN V+V+EH+ IRA+D V+++GPGAG GG V +G + + A Sbjct: 523 MRELADRGNAVLVIEHEPLVIRASDRVVELGPGAGKQGGRVTFDGRPDGLAAR------- 575 Query: 591 YMSGKRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLI 650 G ++R P+ + + GAR NNL+DVT+ +P+G+ ITG SGSGKSTL+ Sbjct: 576 ---GPLASARAERRAPSGK---IAIHGARENNLRDVTVDVPLGVVVAITGPSGSGKSTLV 629 Query: 651 NDTLFPIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTP 710 ND L+ R + P YR I+G V +DQ+P+GRT R NPATYTG + Sbjct: 630 NDVLYRHIARARGYKDVEAPGLYRRIEGTADIRTVTLVDQAPLGRTSRGNPATYTGAWNR 689 Query: 711 VRELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKR 770 +R LFA PE+ AR PG FSFNV GRCEAC G+G +EM FL D+ + C CKGKR Sbjct: 690 IRALFAEQPEASARDLGPGHFSFNVALGRCEACAGEGSETIEMQFLADVSLTCPTCKGKR 749 Query: 771 YNRETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTL 830 + E LE+K G+++ +VLD++I+EA E F PA+ R L L +GL Y+ LGQ +TL Sbjct: 750 FRDEVLEVKLDGRSVADVLDLSIDEAFEVFVGQPAIRRALAPLKQLGLGYLTLGQPLSTL 809 Query: 831 SGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEH 890 SGGEAQR+K+AR L + G L++LDEP+ GLH ++ L L L +G +++V++H Sbjct: 810 SGGEAQRLKIARALGEPCAG-ALFLLDEPSAGLHPEEVTHLNAALSVLVAEGASVIVVDH 868 Query: 891 NLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLKPML 940 +LDVI ADW+VDLGP GS GG ++ GTPE VA A+ T L Sbjct: 869 DLDVIAAADWVVDLGPGAGSEGGSVVAEGTPEEVART-ATRTGVSLAEWF 917 Score = 535 bits (1379), Expect = e-150, Method: Composition-based stats. Identities = 261/539 (48%), Positives = 354/539 (65%), Gaps = 5/539 (0%) Query: 404 RPCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEI 463 PC +C G+RL R V + S S+ A + L+ G RA IAE KE+ Sbjct: 1242 DPCEACGGSRLAPIPRAVRLAGERYHQASGRSVAAAAAWARGLQFTGDRALIAEAPHKEL 1301 Query: 464 GDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRD 523 RL F+ VGL YLTL R A TLSGGE QR+RLA+Q+G+GL G +YVLDEP+IGLH RD Sbjct: 1302 CRRLDFVCEVGLGYLTLDRRAATLSGGEMQRLRLAAQLGSGLTGALYVLDEPTIGLHPRD 1361 Query: 524 NERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAV 583 +RLLG L L +G+TV++VEHD D IRAADH+ID+GP G GG +VA GP A++A Sbjct: 1362 TDRLLGNLRRLAGMGSTVLMVEHDADTIRAADHLIDLGPSGGRKGGRIVAAGPSRAVLAN 1421 Query: 584 PESLTGQYMSGKRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSG 643 P+S T + ++G+ + + + + ++L GAR +NL+ TL +P G T + GVSG Sbjct: 1422 PDSPTARALAGEDAL-LSARPARPPVREHIELLGARAHNLQGDTLRIPAGRMTVVAGVSG 1480 Query: 644 SGKSTLINDTLFPIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPAT 703 SGKSTLI L+P A+R L EP P++ ++ + + + +DQSPIGRTPRS PAT Sbjct: 1481 SGKSTLIQKVLYPAARRALELE-APEPGPHKALRLPKSILRAVAVDQSPIGRTPRSIPAT 1539 Query: 704 YTGVFTPVRELFAGVPESRARGYTPGRFSFNVR-GGRCEACQGDGVIKVEMHFLPDIYVP 762 + GV+ VR+L+A P+++ RGY P RFSFN GGRC AC+G GVI EM FLPD+ P Sbjct: 1540 FLGVWDEVRKLYAACPDAQVRGYGPARFSFNTASGGRCPACEGQGVIAHEMSFLPDVTTP 1599 Query: 763 CDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIR 822 C+ C G R+ TL+++Y G ++ E+LD+T EEA E F A P + L T+ D+G+ Y+ Sbjct: 1600 CEACGGARFEPATLDVRYLGLSVGELLDLTAEEAVEVFAAHPKIRAPLSTMCDLGVGYLH 1659 Query: 823 LGQSATTLSGGEAQRVKLAREL-SKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQ 881 +GQ + TLSGGEAQR+KLA EL + TLY+LDEPTTGLH AD+ +L+ VL +L ++ Sbjct: 1660 IGQGSHTLSGGEAQRLKLAAELTAGARPKPTLYVLDEPTTGLHLADVTRLVRVLDRLVER 1719 Query: 882 GNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLKPML 940 G+T+V+IEH+ VI AD +V+LGPEGG+GGG I+ GTP VA + T LK + Sbjct: 1720 GDTLVIIEHHPAVIACADHVVELGPEGGAGGGRIVAEGTPREVARQP-TATGEVLKRIF 1777 Score = 283 bits (725), Expect = 2e-74, Method: Composition-based stats. Identities = 123/296 (41%), Positives = 178/296 (60%), Gaps = 9/296 (3%) Query: 3 KIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYAR 62 +IEV GAR HNL ++ VIP +++V+TG SGSGKS+LAFD ++AEGQRR++E+L+ YAR Sbjct: 957 RIEVEGAREHNLAEVSTVIPHGEIVVITGPSGSGKSTLAFDVVFAEGQRRFLETLTPYAR 1016 Query: 63 QFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCPD 122 QFL + +PDVD + G+ P+I++EQ++T STV T+TEI YLRLL+A+VGE RCPD Sbjct: 1017 QFLPTLPRPDVDRVTGVPPSIALEQRTTRSGANSTVATVTEIAHYLRLLYAKVGEARCPD 1076 Query: 123 HDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARIDGE 182 DVP+ A++ + +++S G R LLAP + RKG + A G RA DGE Sbjct: 1077 CDVPIEARSPDDVYRSLVST-RGART-LLAPAVVARKGTYLDVFTAAARAGITRALADGE 1134 Query: 183 VCDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVADMDDPKA 242 C PP+L+ +++H+I++V+ ++ F+ AL G + + Sbjct: 1135 PCATDSPPRLDKRREHSIDLVMYEGRMDGLDRA----LFDRALAFGRGAIKLV---GGRG 1187 Query: 243 EELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNP 298 E L S CP CG + EL+PR FSFN G C +C+G G + D +P Sbjct: 1188 GEQLLSTTRTCPRCGVGVPELDPRWFSFNTKQGRCASCEGTGASDFDDDALATPDP 1243 Score = 227 bits (580), Expect = 1e-57, Method: Composition-based stats. Identities = 122/395 (30%), Positives = 166/395 (42%), Gaps = 64/395 (16%) Query: 405 PCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIG 464 C +C+G R R E V ++ + + D+SI A E F I Sbjct: 741 TCPTCKGKRFRDEVLEVKLDGRSVADVLDLSIDEAFEVFVG--------------QPAIR 786 Query: 465 DRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDN 524 L L +GL YLTL + TLSGGEAQR+++A +G G +++LDEPS GLH + Sbjct: 787 RALAPLKQLGLGYLTLGQPLSTLSGGEAQRLKIARALGEPCAGALFLLDEPSAGLHPEEV 846 Query: 525 ERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVP 584 L L L G +VIVV+HD D I AAD V+D+GPGAG GG VVAEG E + Sbjct: 847 THLNAALSVLVAEGASVIVVDHDLDVIAAADWVVDLGPGAGSEGGSVVAEGTPEEVARTA 906 Query: 585 -------ESLTGQYMSGKRKIEV-----------PKKRVPAN-----PEKVLKLTGARGN 621 Q G + P KR A +++ GAR + Sbjct: 907 TRTGVSLAEWFAQRGDGGARRPRRGSAAAPAAPKPGKRGGAAARASLDRGRIEVEGAREH 966 Query: 622 NLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAEPAPYRDIQGLEH 681 NL +V+ +P G ITG SGSGKSTL D +F QR+ + Sbjct: 967 NLAEVSTVIPHGEIVVITGPSGSGKSTLAFDVVFAEGQRRFLETLTPYARQFLPTLPRPD 1026 Query: 682 FDKV------IDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESRARGYTPGRFSFNV 735 D+V I ++Q S AT T + +R L+A V E+ Sbjct: 1027 VDRVTGVPPSIALEQRTTRSGANSTVATVTEIAHYLRLLYAKVGEA-------------- 1072 Query: 736 RGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKR 770 RC C + +E D+Y +G R Sbjct: 1073 ---RCPDCD----VPIEARSPDDVYRSLVSTRGAR 1100 Score = 187 bits (474), Expect = 2e-45, Method: Composition-based stats. Identities = 83/228 (36%), Positives = 115/228 (50%), Gaps = 16/228 (7%) Query: 724 RGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKYKGK 783 P FSFN + GRC +C+G G + L PC+ C G R ++ G+ Sbjct: 1206 PELDPRWFSFNTKQGRCASCEGTGASDFDDDALATPD-PCEACGGSRLAPIPRAVRLAGE 1264 Query: 784 TIHEV--------------LDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATT 829 H+ L T + A L R+L + +VGL Y+ L + A T Sbjct: 1265 RYHQASGRSVAAAAAWARGLQFTGDRALIAEAPHKELCRRLDFVCEVGLGYLTLDRRAAT 1324 Query: 830 LSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIE 889 LSGGE QR++LA +L TG LY+LDEPT GLH D +LL L +L G+T++++E Sbjct: 1325 LSGGEMQRLRLAAQLGSGLTG-ALYVLDEPTIGLHPRDTDRLLGNLRRLAGMGSTVLMVE 1383 Query: 890 HNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLK 937 H+ D I+ AD ++DLGP GG GG I+ +G V S TAR L Sbjct: 1384 HDADTIRAADHLIDLGPSGGRKGGRIVAAGPSRAVLANPDSPTARALA 1431 Score = 135 bits (340), Expect = 7e-30, Method: Composition-based stats. Identities = 71/271 (26%), Positives = 112/271 (41%), Gaps = 45/271 (16%) Query: 354 ENIEFKYMNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREE-LAKF----ISNRPCA- 407 + F GV + + Y + VR A+F S C Sbjct: 1520 RAVAVDQSPIGRTPRSIPATFLGVWDEVRKLYAACPDAQVRGYGPARFSFNTASGGRCPA 1579 Query: 408 ----------------------SCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNN 445 +C G R V + + D++ A+E F Sbjct: 1580 CEGQGVIAHEMSFLPDVTTPCEACGGARFEPATLDVRYLGLSVGELLDLTAEEAVEVF-- 1637 Query: 446 LKLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQI--GA 503 +I L + ++G+ YL + + + TLSGGEAQR++LA+++ GA Sbjct: 1638 ------------AAHPKIRAPLSTMCDLGVGYLHIGQGSHTLSGGEAQRLKLAAELTAGA 1685 Query: 504 GLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPG 563 +YVLDEP+ GLH D RL+ L L + G+T++++EH I ADHV+++GP Sbjct: 1686 RPKPTLYVLDEPTTGLHLADVTRLVRVLDRLVERGDTLVIIEHHPAVIACADHVVELGPE 1745 Query: 564 AGVHGGEVVAEGPLEAIMAVPESLTGQYMSG 594 G GG +VAEG + P + TG+ + Sbjct: 1746 GGAGGGRIVAEGTPREVARQP-TATGEVLKR 1775 Score = 89.3 bits (220), Expect = 7e-16, Method: Composition-based stats. Identities = 52/254 (20%), Positives = 91/254 (35%), Gaps = 24/254 (9%) Query: 2 DKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYA 61 + IE+ GAR HNL+ L IP ++ VV G+SGSGKS+L LY +R Sbjct: 1448 EHIELLGARAHNLQGDTLRIPAGRMTVVAGVSGSGKSTLIQKVLYPAARRALELEAPEPG 1507 Query: 62 RQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCP 121 + K + A++++Q PRS T + D +R L+A + + Sbjct: 1508 PHKALRLPK-------SILRAVAVDQSPIGRTPRSIPATFLGVWDEVRKLYAACPDAQVR 1560 Query: 122 DHDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARIDG 181 + A + + EG+ ++ + + A +D Sbjct: 1561 GYG--PARFSFNTASGGRCPACEGQGVIAHEMSFLPDVTTPCEACGGAR---FEPATLDV 1615 Query: 182 EVCDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVV----ADM 237 LS L+L + +EV ++ T +L G + + Sbjct: 1616 RYLGLSVGELLDLTAEEAVEVF--------AAHPKIRAPLSTMCDLGVGYLHIGQGSHTL 1667 Query: 238 DDPKAEELLFSANF 251 +A+ L +A Sbjct: 1668 SGGEAQRLKLAAEL 1681 >UniRef50_Q1D9R5 UvrABC system, A protein n=2 Tax=Cystobacterineae RepID=Q1D9R5_MYXXD Length = 1767 Score = 871 bits (2251), Expect = 0.0, Method: Composition-based stats. Identities = 344/939 (36%), Positives = 511/939 (54%), Gaps = 27/939 (2%) Query: 1 MDKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAY 60 M K + GARTHNLK++++ + + + VTG+SG+GKSSLA DTLYAEGQRR+VES S Y Sbjct: 1 MHKTHLVGARTHNLKDLSVDLSEGEFVCVTGVSGAGKSSLALDTLYAEGQRRFVESFSPY 60 Query: 61 ARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRC 120 ARQFL +E+P +D +E ++ +++++++ + RSTV T+ ++ YL LF R P C Sbjct: 61 ARQFLERLERPPMDALEPVAAGVAVDRRAPVKSSRSTVATLADVEPYLSALFTREAVPVC 120 Query: 121 PDHDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARID 180 V + + + +L P+ L GY R + Sbjct: 121 GTCGVEAVRTDARVAAAAAIREHTDAQAILTFPLRIPDTAAFLDARARLLKDGYHRLMVQ 180 Query: 181 GEVCDLSDPPKLELQKKHTIE-VVVDRFKVRDDLTQRLAESFETALELSGGTAVVADMDD 239 GEV +L E I VVVDR K+ + R+ ++ E A + G A + Sbjct: 181 GEVKELESLRPAEATDPAGIARVVVDRVKLTNAQLSRVTQALEDAWNRADGEAHLFVP-- 238 Query: 240 PKAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPE 299 ++ CP C P LFS+ +P GAC C G G D +VI NPE Sbjct: 239 GQSVPQRLRRGLVCPKCAREFEAARPGLFSYQSPVGACAACRGFGRTIGIDWGKVIPNPE 298 Query: 300 LSLAGGAIRGWDR-RNFYYFQMLKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKENIEF 358 LSL+ GAIR W + ML+ + PWG L+ + VL G G Sbjct: 299 LSLSEGAIRPWSGQSTTWERGMLQRWCKARGIPWDKPWGLLTPEQRESVLEGEGD----- 353 Query: 359 KYMNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGTRLRREA 418 + GV T VR LA++ + C SC G RL +A Sbjct: 354 ---------YDEGRAYPGVRAWFRWMEGRTYKMHVRVLLARYRAYTLCESCGGGRLNAQA 404 Query: 419 RHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNVGLNYL 478 R V LP+ + + A+ + L+ + ++A +E+ RL++L VGL YL Sbjct: 405 RAYRVGGLDLPSWHHLELTDALARLDALRTITGQGELAR---RELAGRLRYLQRVGLGYL 461 Query: 479 TLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLG 538 TL R A TLSGGEAQR+ L + +G L G ++VLDEP++GLH D L + L + G Sbjct: 462 TLDRPARTLSGGEAQRVSLTAALGTSLTGALFVLDEPTVGLHPGDVPPLTEAIAELAERG 521 Query: 539 NTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKI 598 N +V+EHD IR+A V+++GPGAG GG +V +G EA+ + TG+ ++G ++ Sbjct: 522 NIALVIEHDPLVIRSAHRVLELGPGAGKQGGRLVFDGTPEALAKKQDLPTGRLLAGVDEV 581 Query: 599 EVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIA 658 R P L + GAR +NLKD+T+ +P+G+ +TG SGSGKSTL+++ L+ Sbjct: 582 P----RTPRTRTGALVIRGAREHNLKDLTVEVPLGVLCAVTGPSGSGKSTLMDEVLYRHL 637 Query: 659 QRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGV 718 R+L + P ++G+E + +DQSP+GRT R N ATYT + +RE FA Sbjct: 638 ARRLGVKDVEAPGAVDAVEGMEAVKAITLVDQSPLGRTSRGNAATYTKAWDRLRERFASE 697 Query: 719 PESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEI 778 P++ RG T FSFNV GRCEAC G+G VEM FL D+ + C C+G+R+ E L + Sbjct: 698 PDAEVRGLTAAHFSFNVDKGRCEACSGEGYETVEMQFLADVALLCAVCRGRRFKEEVLAV 757 Query: 779 KYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRV 838 +++G ++ +VL+MT++E + F AL R L + +GL Y+ LGQ +TLSGGEAQR+ Sbjct: 758 RHQGFSVAQVLEMTVDEVLQHFGGDTALKRTLGPVARLGLGYLPLGQPLSTLSGGEAQRL 817 Query: 839 KLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTA 898 KLAR L+ G TL+++DEP+ GLH D++ ++ L+ L D G +++V++H++ V+K + Sbjct: 818 KLARALANEAQG-TLFLIDEPSAGLHAEDVRHVITALNALVDFGASVLVVDHDVAVMKAS 876 Query: 899 DWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLK 937 DW++DLGP GG GG ++ GTPE VA + TA+ L+ Sbjct: 877 DWVIDLGPVGGRDGGRLVAEGTPEDVARGKG-ATAQALR 914 Score = 529 bits (1362), Expect = e-148, Method: Composition-based stats. Identities = 302/858 (35%), Positives = 438/858 (51%), Gaps = 76/858 (8%) Query: 113 ARVGEPRCPDHDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQ 172 AR +PL TV GK ++ + E + +TL A Q Sbjct: 942 AREHNLHDVSCRIPLGKMTV-----VTGPSGSGKSSLVFDVVFAEGQRRFLETLSPYARQ 996 Query: 173 GYIRARIDGEVCDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTA 232 ++ + +V +S P + + E +G T+ Sbjct: 997 -FLPSMPRPDVERISSLPP--------------------------SVALEQRTSRAGATS 1029 Query: 233 VVADMDDPKAEELLFSANF---ACPICGYSMRELEPRLF--SFNNPAG-----ACPTCDG 282 VA + + L A CP + L P + G A Sbjct: 1030 TVATVTEVAHYLRLLFAKLGEPHCPDDDSPITSLAPDVLFAQLTAMKGEGTLLAPAVRSR 1089 Query: 283 LGVQQYFDPDRVIQNPELSLAGGAIRGWDRRNFYYFQMLKSLADHYKFDVEAPWGS--LS 340 G ++ G + D LA + D++ LS Sbjct: 1090 KGTYLDIFAAAARAGISRAIVDGKLASTDDP--------PRLAKTREHDIDLVMYEGKLS 1141 Query: 341 ANVHKVVLYGSGKENIEFKYMNDRGDT---SIRRHPFEG-VLHNMERRYKETESSAVREE 396 V G K +G+T + R P G + ++ R+ + R E Sbjct: 1142 KLERDVFEKALGWGQGAVKVDAGKGETLLSTERTCPKCGTAVPELDPRWFSFNTKQGRCE 1201 Query: 397 L---------AKFISNR---PCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFN 444 A+ ++ PC +C G+RL R V +E + S+ + Sbjct: 1202 SCEGTGIQGGAEAMAEGEVAPCRTCGGSRLAPVPRGVRLEGARYHEVVQQSVASTLTRVR 1261 Query: 445 NLKLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAG 504 K G RA + E +E+ R++FL VGL YL+L R+A TLSGGE QR+RL++Q+GAG Sbjct: 1262 GWKFKGDRALLGEPSRQELLRRMEFLERVGLGYLSLDRNAATLSGGEMQRLRLSAQLGAG 1321 Query: 505 LVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGA 564 L G MYVLDEP+IGLH RD RLL L L G+TV+VVEHD D IRAADH++D+GP Sbjct: 1322 LTGAMYVLDEPTIGLHPRDTHRLLDNLRALVATGSTVLVVEHDSDTIRAADHLLDLGPTG 1381 Query: 565 GVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEVPKKRVPANPEKVLKLTGARGNNLK 624 G GG ++AEGP + ++ +S T + + ++ +V ++ ++L GAR NNLK Sbjct: 1382 GRGGGHILAEGPPDVVLES-DSPTARAL---KESQVRPPSGRGEAKQWIELKGARANNLK 1437 Query: 625 DVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAEPAPYRDIQGLEHFDK 684 V L LPVG ++GVSGSGKSTLI L+P + +L+ A+P P+ + G E + Sbjct: 1438 RVDLRLPVGRLNVVSGVSGSGKSTLIRQVLYPALREKLD-RVTAKPGPFTSLHGAEAVKR 1496 Query: 685 VIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESRARGYTPGRFSFNVR-GGRCEAC 743 V+ +DQSPIGRTPRS PAT+ G++ +R +FA PE++ +G+TP RFSFN GGRC AC Sbjct: 1497 VLSVDQSPIGRTPRSVPATFLGIWDELRRVFAATPEAKIKGFTPTRFSFNSASGGRCTAC 1556 Query: 744 QGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAV 803 G G I EM FLPD+ PC+ C G R++ TLE++Y G TI +VL ++ +EA++ F A+ Sbjct: 1557 DGQGAISHEMSFLPDVVTPCEACNGARFDAATLEVRYHGLTIGDVLRLSADEAKDVFKAL 1616 Query: 804 PALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLAREL-SKRGTGQTLYILDEPTTG 862 P +A L+ L D+G+ Y++LGQ + TLSGGEAQR+KLA EL + TLY+LDEPTTG Sbjct: 1617 PRVAAPLECLADLGVGYLQLGQGSNTLSGGEAQRLKLAAELTASARHEPTLYVLDEPTTG 1676 Query: 863 LHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPE 922 LH D+++L+ + +L D+G+T+VVIEH+ VI AD +V+LGP+GG GG I+ GTP Sbjct: 1677 LHLGDVEKLITFMGRLVDRGDTLVVIEHHPSVIGAADHVVELGPDGGEAGGHIVAEGTPR 1736 Query: 923 TVAECEASHTARFLKPML 940 VA+ + + T R LK + Sbjct: 1737 EVAKQK-TPTGRVLKSLF 1753 Score = 281 bits (719), Expect = 1e-73, Method: Composition-based stats. Identities = 119/283 (42%), Positives = 166/283 (58%), Gaps = 10/283 (3%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 63 IEV AR HNL +++ IP K+ VVTG SGSGKSSL FD ++AEGQRR++E+LS YARQ Sbjct: 937 IEVEHAREHNLHDVSCRIPLGKMTVVTGPSGSGKSSLVFDVVFAEGQRRFLETLSPYARQ 996 Query: 64 FLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCPDH 123 FL M +PDV+ I L P++++EQ+++ STV T+TE+ YLRLLFA++GEP CPD Sbjct: 997 FLPSMPRPDVERISSLPPSVALEQRTSRAGATSTVATVTEVAHYLRLLFAKLGEPHCPDD 1056 Query: 124 DVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARIDGEV 183 D P+ + + + + LLAP ++ RKG + A G RA +DG++ Sbjct: 1057 DSPITSLAPDVLFAQLTAM--KGEGTLLAPAVRSRKGTYLDIFAAAARAGISRAIVDGKL 1114 Query: 184 CDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVADMDDPKAE 243 DPP+L ++H I++V+ K+ + FE AL G V D Sbjct: 1115 ASTDDPPRLAKTREHDIDLVMYEGKLSKLER----DVFEKALGWGQGAVKV----DAGKG 1166 Query: 244 ELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQ 286 E L S CP CG ++ EL+PR FSFN G C +C+G G+Q Sbjct: 1167 ETLLSTERTCPKCGTAVPELDPRWFSFNTKQGRCESCEGTGIQ 1209 Score = 221 bits (563), Expect = 1e-55, Method: Composition-based stats. Identities = 99/324 (30%), Positives = 156/324 (48%), Gaps = 24/324 (7%) Query: 406 CASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGD 465 CA C G R + E V + + + +M++ ++ F + Sbjct: 742 CAVCRGRRFKEEVLAVRHQGFSVAQVLEMTVDEVLQHFGG--------------DTALKR 787 Query: 466 RLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNE 525 L + +GL YL L + TLSGGEAQR++LA + G ++++DEPS GLH D Sbjct: 788 TLGPVARLGLGYLPLGQPLSTLSGGEAQRLKLARALANEAQGTLFLIDEPSAGLHAEDVR 847 Query: 526 RLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPE 585 ++ L L D G +V+VV+HD ++A+D VID+GP G GG +VAEG E + A + Sbjct: 848 HVITALNALVDFGASVLVVDHDVAVMKASDWVIDLGPVGGRDGGRLVAEGTPEDV-ARGK 906 Query: 586 SLTGQYMSGKRKI---EVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVS 642 T Q + G+RK V ++ +++ AR +NL DV+ +P+G T +TG S Sbjct: 907 GATAQALRGERKPLGRAVKLRKPGKGEVPAIEVEHAREHNLHDVSCRIPLGKMTVVTGPS 966 Query: 643 GSGKSTLINDTLFPIAQRQLNGATIAEPAPYRDIQGLEHFDKV------IDIDQSPIGRT 696 GSGKS+L+ D +F QR+ + +++ + ++Q Sbjct: 967 GSGKSSLVFDVVFAEGQRRFLETLSPYARQFLPSMPRPDVERISSLPPSVALEQRTSRAG 1026 Query: 697 PRSNPATYTGVFTPVRELFAGVPE 720 S AT T V +R LFA + E Sbjct: 1027 ATSTVATVTEVAHYLRLLFAKLGE 1050 Score = 86.6 bits (213), Expect = 4e-15, Method: Composition-based stats. Identities = 42/120 (35%), Positives = 62/120 (51%), Gaps = 7/120 (5%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 63 IE++GAR +NLK ++L +P +L VV+G+SGSGKS+L LY R ++ ++A Sbjct: 1426 IELKGARANNLKRVDLRLPVGRLNVVSGVSGSGKSTLIRQVLYP-ALREKLDRVTAKPGP 1484 Query: 64 FLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCPDH 123 F SL V + +S++Q PRS T I D LR +FA E + Sbjct: 1485 FTSLHGAEAVKRV------LSVDQSPIGRTPRSVPATFLGIWDELRRVFAATPEAKIKGF 1538 >UniRef50_Q6MBT0 Putative excinuclease ABC chain A n=1 Tax=Candidatus Protochlamydia amoebophila UWE25 RepID=Q6MBT0_PARUW Length = 937 Score = 861 bits (2224), Expect = 0.0, Method: Composition-based stats. Identities = 357/936 (38%), Positives = 562/936 (60%), Gaps = 20/936 (2%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 63 I ++G + HNLKN+++ +P+ + V+TG+SGSGKSSLAFDTL+AEGQRRY+E LS AR Sbjct: 10 INLQGCKEHNLKNLSVQLPKHAITVITGVSGSGKSSLAFDTLFAEGQRRYLEYLSPQARP 69 Query: 64 FLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCPDH 123 ++ M KPDVD IEGLSP ++I Q TV T T+++D+L LL+A+VG+ P Sbjct: 70 WIKQMPKPDVDLIEGLSPTLAIGQHRQPLYFYGTVATYTDLYDFLSLLYAKVGDQYSPAT 129 Query: 124 DVPLAAQTVSQMVDNVLSQPE-GKRLMLLAPIIKERKGEHTKTLENLASQGYIRARIDGE 182 L+ T +M+D +L G RL L+API ++ H + L G+IR RI+ + Sbjct: 130 GKKLSRFTRQEMIDWILKNYSAGSRLQLIAPIKLVKENGHQ-AITRLQQMGFIRMRINEQ 188 Query: 183 VCDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVADMDDPKA 242 +P + +EVVVDR ++R+ + RLA S ETAL+LS G + + + Sbjct: 189 EWCGENPFPINK-AISNLEVVVDRLEIREGIRDRLAPSVETALDLSQGILKIQE--GKEG 245 Query: 243 EELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPELSL 302 + + CP G+S LE F+FN+P GAC C+GLG ++ +P +VI + L Sbjct: 246 NTHYLTEIYVCPETGFSFAPLEAGDFNFNSPKGACAACNGLGGREQVNPSQVIFDENEPL 305 Query: 303 AG---GAIRGWDRRNFYYFQ-MLKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKENIEF 358 + ++ Y F+ +LK+L E +S + +L+G +E + Sbjct: 306 LDQIQVILDHLPKKAAYSFKSLLKALWKILNLSEENFIKDISQMILNKILFGHSQEIVFN 365 Query: 359 KYMNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGTRLRREA 418 +N+ ++ + ++G++ + + ++ EL+ FI + C+SC G RL+ E+ Sbjct: 366 VQINE--ESEQLKAKWKGLIPVLNEALEMKKNKGSLSELS-FIDWQTCSSCLGGRLKPES 422 Query: 419 RHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNVGLNYL 478 ++ + + +++ + G++ I ++IL I RL+FL VGL YL Sbjct: 423 LACLIQEKNIYQLCSLTVAECLIKIKAWLFTGKQEAIVKEILPHIQSRLEFLDQVGLGYL 482 Query: 479 TLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLG 538 TL+R +TLS GEA RI+LASQIGA L G++Y+LDEPS+GLH++D + L + L+ LG Sbjct: 483 TLTREGKTLSDGEAHRIQLASQIGAKLSGIIYILDEPSLGLHRQDIQHLHKVIHELKALG 542 Query: 539 NTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKI 598 NTV++VEH++ I+ AD+++++GPGAG GG++ +G + ++ SLTG+++SGK + Sbjct: 543 NTVVIVEHEKSLIQQADYILELGPGAGSLGGQICFQGTITDLLNDSNSLTGKWLSGKLSL 602 Query: 599 EVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIA 658 +P +R + L++ GA NNL D + +P+G F GVSGSGKSTL+ D + Sbjct: 603 PIPPRRKI--QQDWLEIRGATLNNLNDFSANIPLGCFVGFCGVSGSGKSTLVLDIIGQQL 660 Query: 659 QRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGV 718 + L I + + ++I ++ + RS PATY G+ TP+R+LFA Sbjct: 661 KNFLVRGIIPH-----FLNKYQTIKRLISHEKQTDRLSARSIPATYIGIMTPLRQLFAET 715 Query: 719 PESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEI 778 ++ARGYT RFS N RGGRCEAC+G G I+V MH +PD ++PCD C+G RYN ETL+I Sbjct: 716 RLAKARGYTASRFSLNKRGGRCEACEGLGYIEVNMHLMPDFFMPCDICQGLRYNYETLQI 775 Query: 779 KYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRV 838 ++ K I ++L ++ E+ + F +P+LA L+ + ++GL Y++LGQ TLSGGE QR+ Sbjct: 776 TWENKNIADILRLSALESFQLFKHIPSLAPTLELMTELGLDYLQLGQPFNTLSGGEIQRL 835 Query: 839 KLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTA 898 KL +L+ + +TLYILDEP++GLH DI++L+ +LHKL ++G+T+ VIEH+LD++ A Sbjct: 836 KLIADLAGKTQEKTLYILDEPSSGLHLQDIEKLVKILHKLVEKGHTVFVIEHHLDILYQA 895 Query: 899 DWIVDLGPEGGSGGGEILVSGTPETVAECEASHTAR 934 DW+++LGPEGG GG ++ G + + + T + Sbjct: 896 DWLIELGPEGGPKGGRLIFEGPSTKMIKA-HTPTGK 930 Score = 153 bits (388), Expect = 2e-35, Method: Composition-based stats. Identities = 72/203 (35%), Positives = 111/203 (54%), Gaps = 17/203 (8%) Query: 752 EMHFLPDIYVPCDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEE------AREFFDAVPA 805 E+ F+ + C C G R E+L + K I+++ +T+ E A F A Sbjct: 401 ELSFID--WQTCSSCLGGRLKPESLACLIQEKNIYQLCSLTVAECLIKIKAWLFTGKQEA 458 Query: 806 LAR--------KLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILD 857 + + +L+ L VGL Y+ L + TLS GEA R++LA ++ + +G +YILD Sbjct: 459 IVKEILPHIQSRLEFLDQVGLGYLTLTREGKTLSDGEAHRIQLASQIGAKLSG-IIYILD 517 Query: 858 EPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILV 917 EP+ GLH DIQ L V+H+L+ GNT+V++EH +I+ AD+I++LGP GS GG+I Sbjct: 518 EPSLGLHRQDIQHLHKVIHELKALGNTVVIVEHEKSLIQQADYILELGPGAGSLGGQICF 577 Query: 918 SGTPETVAECEASHTARFLKPML 940 GT + S T ++L L Sbjct: 578 QGTITDLLNDSNSLTGKWLSGKL 600 Score = 79.6 bits (195), Expect = 6e-13, Method: Composition-based stats. Identities = 36/112 (32%), Positives = 54/112 (48%), Gaps = 11/112 (9%) Query: 2 DKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYA 61 D +E+RGA +NL + + IP + G+SGSGKS+L D + GQ+ + Sbjct: 613 DWLEIRGATLNNLNDFSANIPLGCFVGFCGVSGSGKSTLVLDII---GQQLKNFLVRGII 669 Query: 62 RQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFA 113 FL+ + I+ L IS E+++ + RS T I LR LFA Sbjct: 670 PHFLNKYQT-----IKRL---ISHEKQTDRLSARSIPATYIGIMTPLRQLFA 713 Score = 64.6 bits (156), Expect = 2e-08, Method: Composition-based stats. Identities = 39/130 (30%), Positives = 59/130 (45%), Gaps = 8/130 (6%) Query: 610 EKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAE 669 + + L G + +NLK++++ LP T ITGVSGSGKS+L DTLF QR+ + Sbjct: 7 HRFINLQGCKEHNLKNLSVQLPKHAITVITGVSGSGKSSLAFDTLFAEGQRRYLEYLSPQ 66 Query: 670 PAPYRDIQGLEHFDKV------IDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESRA 723 P+ D + + I Q ATYT ++ + L+A V + + Sbjct: 67 ARPWIKQMPKPDVDLIEGLSPTLAIGQHRQPLYFYGTVATYTDLYDFLSLLYAKVGDQYS 126 Query: 724 R--GYTPGRF 731 G RF Sbjct: 127 PATGKKLSRF 136 >UniRef50_C4ZKV2 Excinuclease ABC, A subunit n=1 Tax=Thauera sp. MZ1T RepID=C4ZKV2_THASP Length = 2017 Score = 851 bits (2200), Expect = 0.0, Method: Composition-based stats. Identities = 385/968 (39%), Positives = 532/968 (54%), Gaps = 125/968 (12%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 63 IE+R AR HNLKN++L IPRD+ V+TGLSGSGKS+LAFD ++ EGQRRY+ESL+AYARQ Sbjct: 1138 IEIRHAREHNLKNVSLQIPRDQFTVITGLSGSGKSTLAFDIVFGEGQRRYLESLNAYARQ 1197 Query: 64 FLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCPDH 123 F+ +PDVD + G+ P ++IEQ+++ +STV T+TEIH +LRL++ ++G CPD Sbjct: 1198 FVQPASRPDVDGLFGIPPTVAIEQRTSRGGRKSTVATLTEIHPFLRLMYVKLGTQFCPDC 1257 Query: 124 DVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARIDGEV 183 +VP+ Q+ +V + + G + +LAP++ RKG +T + +G+ + R+DGE Sbjct: 1258 NVPVTPQSFEAIVAQLQRELRGASVEVLAPLVVNRKGLYTDLAKWARGKGHAQLRVDGEY 1317 Query: 184 CDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVADMDDPKAE 243 + P+L+ K+H IE+ V+ + L E ALE+ G V ++ A Sbjct: 1318 LPTAKWPRLDRYKEHNIELPTGMVVVQPESEATLREFVRQALEIGKGVIKVLEIGKLGAV 1377 Query: 244 ELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPELSLA 303 + FS ACP CG E +P L + Sbjct: 1378 PITFSTLRACPSCGTGFPE---------------------------------PDPRL-FS 1403 Query: 304 GGAIRGWDRRNFYYFQMLKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKENIEFKYMND 363 A GW + Y LK+ A + G +E I Sbjct: 1404 YNAKHGWCPKC--YGTGLKTAARI--------------EDPDALDLGDAEEVI------- 1440 Query: 364 RGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGTRLRREARHVYV 423 +S+ PC +C+G RL AR V Sbjct: 1441 -------------------------------------VSDEPCPACDGARLNPVARAVRF 1463 Query: 424 ENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTLSRS 483 + L ++ + A FF +L L + IA ++ EI RL FL +VGL YL L R+ Sbjct: 1464 RDLGLHQLAAQPVDRAAGFFADLALNERETDIARDLVSEIRGRLAFLQHVGLGYLALDRA 1523 Query: 484 AETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIV 543 A TLSGGEAQRIRLA+Q+G+ L GV Y+LDEP+IGLH RDN LL TL LRD GNT++V Sbjct: 1524 APTLSGGEAQRIRLAAQLGSNLRGVCYILDEPTIGLHPRDNRLLLDTLEALRDRGNTLLV 1583 Query: 544 VEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEVPKK 603 VEHDED IR ADHVID+GPGAGV GG VVAEG + ++A PES TG+ + + + Sbjct: 1584 VEHDEDTIRRADHVIDLGPGAGVRGGRVVAEGTIADLLAAPESATGECFRHPLQHPLRPR 1643 Query: 604 RVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLN 663 R A +++ GA +NL+D+ + +P+ T +TGVSGSGKS+L D + + +L Sbjct: 1644 RAVALENPAIRIEGANLHNLRDIDVRIPLARLTVVTGVSGSGKSSLARDVIHANLRARLG 1703 Query: 664 GATIAEPAPYRD---------------IQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVF 708 + G +V+++DQ+PIG+TPRS PATY G + Sbjct: 1704 DPEATRARRRGQAQPEAVDQPLVGCAAMPGWHQVGRVLEVDQTPIGKTPRSCPATYVGFW 1763 Query: 709 TPVRELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKG 768 +R+LFA ++R RG+ RFSFN GRC C G G VEM FLPD+ PC+ C G Sbjct: 1764 DAIRKLFADTFDARTRGWNASRFSFNTGAGRCPVCDGAGQTTVEMSFLPDVKTPCEACGG 1823 Query: 769 KRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSAT 828 R+N ETL +++K +T+ EVL M ++EA +FF A PA+A LQ L DVGL Y+ LGQ + Sbjct: 1824 ARFNPETLSVRWKDRTVAEVLAMPVDEAVDFFSAHPAIAHPLQLLQDVGLGYLTLGQPSP 1883 Query: 829 TLSGGEAQRVKLARELSKRGTGQ----------------TLYILDEPTTGLHFADIQQLL 872 TLSGGEAQR+KL EL+K +LY+LDEPT GLH AD+ +L+ Sbjct: 1884 TLSGGEAQRIKLVTELAKVRRRPGDAEDTGGVPLPADKHSLYVLDEPTVGLHMADVDKLI 1943 Query: 873 DVLHKLRDQGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHT 932 VLH+L D G+T++VIEH+LDV+ ADW++DLGPEGG GGG ++ G PE SHT Sbjct: 1944 RVLHRLTDAGHTVLVIEHDLDVMAEADWLIDLGPEGGEGGGRVVAEGPPEVAMATPESHT 2003 Query: 933 ARFLKPML 940 R L+ L Sbjct: 2004 GRHLREFL 2011 Score = 543 bits (1398), Expect = e-152, Method: Composition-based stats. Identities = 242/540 (44%), Positives = 330/540 (61%), Gaps = 24/540 (4%) Query: 423 VENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTLSR 482 V+ + + + + + L L G + E +L EI RL +L +VGL YLTL R Sbjct: 523 VQGLAIHELMALPVDRIRDAIAALALPGVADEATELVLGEIRSRLTYLADVGLGYLTLDR 582 Query: 483 SAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVI 542 + TLSGGE QRI L + +G LV ++VLDEPSIGLH RD R+LG + LRD GNT++ Sbjct: 583 QSRTLSGGEVQRINLTTALGTSLVNTLFVLDEPSIGLHPRDIGRILGVMTRLRDAGNTLV 642 Query: 543 VVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEV-P 601 VVEHD + AAD +++IGPG G GG++VA G I A P+S+TG +++G ++I+V Sbjct: 643 VVEHDPQVMVAADELLEIGPGPGERGGDIVARGTPAEIAANPDSVTGPWLAGTKRIDVDR 702 Query: 602 KKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQ 661 R LKL GAR +NL+D+T+ P+ TC+TGVSGSGKSTLI D LFP + Sbjct: 703 PPRPVDAATPRLKLVGARQHNLRDLTVGFPLRRLTCLTGVSGSGKSTLIQDVLFPALAKH 762 Query: 662 LNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPES 721 G P + ++ +++ V+ +DQSPIG++ RSNP +Y G + P+R LFA +PE+ Sbjct: 763 F-GEAAESPGVFDRLENVDNLRGVVMVDQSPIGKSSRSNPVSYVGAWDPIRALFAALPEA 821 Query: 722 RARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKYK 781 + RGYTPG FSFN GRC C G G VEM FL D+++ C C GKRY E LE+++ Sbjct: 822 KQRGYTPGTFSFNAGHGRCPTCTGSGFEHVEMQFLSDVWLRCPDCDGKRYRPEVLELQWN 881 Query: 782 GKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLA 841 G ++ +VL++T+ EA + F P + L L DVGL Y+RLGQ TLSGGEAQR+KLA Sbjct: 882 GLSVADVLELTVHEALDVFREHPKVLAALAPLADVGLDYLRLGQPVPTLSGGEAQRLKLA 941 Query: 842 RELSKRGTGQT----------------------LYILDEPTTGLHFADIQQLLDVLHKLR 879 L++ + L++ DEPTTGLHF D+ +LL KL Sbjct: 942 GHLAEAAQKKPVRKASVVDKFGDKAGDKTEPGLLFLFDEPTTGLHFEDVAKLLGAFDKLL 1001 Query: 880 DQGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLKPM 939 G++++VIEHNLDVI +DWI+DLGPEGG GG I+V G PE V +SHT L+ Sbjct: 1002 QAGHSLIVIEHNLDVIAASDWIIDLGPEGGEDGGAIVVEGPPEAVRAHASSHTGAALRDY 1061 Score = 430 bits (1106), Expect = e-118, Method: Composition-based stats. Identities = 147/438 (33%), Positives = 213/438 (48%), Gaps = 35/438 (7%) Query: 2 DKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYA 61 D I +RGAR +NL+N++L +P ++L VVTG+SGSGKSSL FDTLYAEGQRRYVE+ S YA Sbjct: 19 DAIRIRGARQNNLRNLSLDLPLNRLTVVTGVSGSGKSSLVFDTLYAEGQRRYVETFSPYA 78 Query: 62 RQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCP 121 RQFL M+KP VD IEG+ PAI+I+Q + RSTVGT+TE+ D+ +LL+AR C Sbjct: 79 RQFLDRMDKPQVDRIEGVPPAIAIDQTNPVRTSRSTVGTMTELADHFKLLYARAAHLHCR 138 Query: 122 DHDVPLAAQTVSQMVDNVLSQPE---GKRLMLLAPIIKERKGEHTKTLENLASQGYIRA- 177 P+ + + ++ ++ RL++ P+ + LA+QGY R Sbjct: 139 CCGKPVRRDSAVSIAADLRARAAAAGDPRLVVCFPVTVPSSFSEEEVTGLLAAQGYTRIQ 198 Query: 178 -RIDGEVCDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVA- 235 R+ G + D ++VV DRF+ + RLAE+ E AL+ G V Sbjct: 199 ERLAGVGAEGQDV----------LQVVQDRFRASNAEDSRLAEALEAALQRGHGRLAVYA 248 Query: 236 ---------DMDDPKAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQ 286 P +S+ C C E P LFSFN+P GAC TC G G Sbjct: 249 SGEGVRAEKSAGTPGEAVWRYSSGLHCADCDIHYSEATPGLFSFNSPIGACETCRGFGRV 308 Query: 287 QYFDPDRVIQNPELSLAGGAIRGWDRRNFYYFQM-LKSLADHYKFDVEAPWGSLSANVHK 345 D V+ + +LA GAI+ W ++ Q L+ +A Y ++ P L + Sbjct: 309 IGVDFGLVVPDESKTLAEGAIKPWQTESYRECQQDLEKMAKKYGVAMDIPVRDLPPEHRQ 368 Query: 346 VVLYGSGKENIEFKYMNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRP 405 + G K S + GV H + + +R L+++ S Sbjct: 369 WLFEGDPKWK---------NWDSSWPRYWYGVRHFFDWLETKAYKMHIRVLLSRYRSYTE 419 Query: 406 CASCEGTRLRREARHVYV 423 C +C G RL+ +A + Sbjct: 420 CPACHGARLKPDALLWRL 437 Score = 165 bits (418), Expect = 7e-39, Method: Composition-based stats. Identities = 95/398 (23%), Positives = 143/398 (35%), Gaps = 102/398 (25%) Query: 406 CASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGD 465 C C+G R R E + + + ++++ A++ F ++ Sbjct: 863 CPDCDGKRYRPEVLELQWNGLSVADVLELTVHEALDVFRE--------------HPKVLA 908 Query: 466 RLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLV------------------- 506 L L +VGL+YL L + TLSGGEAQR++LA + Sbjct: 909 ALAPLADVGLDYLRLGQPVPTLSGGEAQRLKLAGHLAEAAQKKPVRKASVVDKFGDKAGD 968 Query: 507 ----GVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGP 562 G++++ DEP+ GLH D +LLG L G+++IV+EH+ D I A+D +ID+GP Sbjct: 969 KTEPGLLFLFDEPTTGLHFEDVAKLLGAFDKLLQAGHSLIVIEHNLDVIAASDWIIDLGP 1028 Query: 563 GAGVHGGEVVAEGPLEAIMAVPESLTGQYMSG------------------KRKIEVPKKR 604 G GG +V EGP EA+ A S TG + E P R Sbjct: 1029 EGGEDGGAIVVEGPPEAVRAHASSHTGAALRDYAEALARTRAGNRGLSPVSADAEAPGSR 1088 Query: 605 VPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGV----------------------- 641 A P G + + Sbjct: 1089 RSGASRDHGGSGRAVATESAIAACAAPTGDRSLVAAEPRVEYRPVAAPAIEIRHAREHNL 1148 Query: 642 ------------------SGSGKSTLINDTLFPIAQRQL------NGATIAEPAPYRDIQ 677 SGSGKSTL D +F QR+ +PA D+ Sbjct: 1149 KNVSLQIPRDQFTVITGLSGSGKSTLAFDIVFGEGQRRYLESLNAYARQFVQPASRPDVD 1208 Query: 678 GLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELF 715 GL + I+Q +S AT T + +R ++ Sbjct: 1209 GLFGIPPTVAIEQRTSRGGRKSTVATLTEIHPFLRLMY 1246 Score = 84.3 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 40/164 (24%), Positives = 68/164 (41%), Gaps = 32/164 (19%) Query: 3 KIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYAR 62 ++++ GAR HNL+++ + P +L +TG+SGSGKS+L D L+ A A+ Sbjct: 713 RLKLVGARQHNLRDLTVGFPLRRLTCLTGVSGSGKSTLIQDVLF-----------PALAK 761 Query: 63 QFLSLMEKPDV----DHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARV--- 115 F E P V ++++ L + ++Q + RS + D +R LFA + Sbjct: 762 HFGEAAESPGVFDRLENVDNLRGVVMVDQSPIGKSSRSNPVSYVGAWDPIRALFAALPEA 821 Query: 116 --------------GEPRCPDHDVPLAAQTVSQMVDNVLSQPEG 145 G RCP Q + +V + Sbjct: 822 KQRGYTPGTFSFNAGHGRCPTCTGSGFEHVEMQFLSDVWLRCPD 865 Score = 81.2 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 41/121 (33%), Positives = 62/121 (51%), Gaps = 6/121 (4%) Query: 606 PANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGA 665 PA+ +++ GAR NNL++++L LP+ T +TGVSGSGKS+L+ DTL+ QR+ Sbjct: 14 PASISDAIRIRGARQNNLRNLSLDLPLNRLTVVTGVSGSGKSSLVFDTLYAEGQRRYVET 73 Query: 666 TIAEPAPYRDIQGLEHFDKV------IDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVP 719 + D D++ I IDQ+ RT RS T T + + L+A Sbjct: 74 FSPYARQFLDRMDKPQVDRIEGVPPAIAIDQTNPVRTSRSTVGTMTELADHFKLLYARAA 133 Query: 720 E 720 Sbjct: 134 H 134 >UniRef50_D0LX97 Excinuclease ABC, A subunit n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LX97_HALO1 Length = 1847 Score = 849 bits (2194), Expect = 0.0, Method: Composition-based stats. Identities = 362/970 (37%), Positives = 503/970 (51%), Gaps = 58/970 (5%) Query: 1 MDKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAY 60 M IE+RGAR +NL +++L + L+ VTG SG+GKSSLAF TLYAEGQRRYVES SAY Sbjct: 1 MRPIELRGARQNNLCSVDLTLEPGTLVAVTGPSGAGKSSLAFGTLYAEGQRRYVESFSAY 60 Query: 61 ARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRC 120 ARQFL + +P+VD ++ + A+++++ + RSTVGT+TE+ DY + L+A C Sbjct: 61 ARQFLERLARPEVDALDPVPAAVAVDRSAPVRTSRSTVGTMTELCDYAKSLWAHSARLCC 120 Query: 121 PDHDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARID 180 P + ++V+ G R+ + + + L +QGY R Sbjct: 121 PGCGAEVQPDEPGAAAESVIEAHSGARVAVSFAVRASSADALALARDELRAQGYGRVLAG 180 Query: 181 GEVCDLSDPPKL----------ELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGG 230 G + L + + V+ DR +RL+ES A+ GG Sbjct: 181 GALAKLDELDDDALAAAAAEDNAHHGGGALAVIADRSTATARNRRRLSESLAAAMHRGGG 240 Query: 231 TAVVADMD--DPKAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQY 288 A V D L FS C C R P LFSFN+P GACP+C G G Sbjct: 241 RARVHVFDAEGGLGVTLRFSDRLHCADCERDFRPATPGLFSFNSPIGACPSCRGFGRVIG 300 Query: 289 FDPDRVIQNPELSLAGGAIRGWDRRNF-YYFQMLKSLADHYKFDVEAPWGSLSANVHKVV 347 D +V+ +P LSL+ GAIR W + + + + L A AP LSA + Sbjct: 301 IDVRKVLPDPSLSLSAGAIRPWRGKKYAWERRELARHAKRAGIPWSAPVSELSAEQLAWL 360 Query: 348 LYGSGKENIEFKYMNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCA 407 + G + RG +T VR LA++ + C Sbjct: 361 VEGEPGGYEGGGWWGLRGW--------------FSWLESKTYKLHVRVLLARYRAYDECP 406 Query: 408 SCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKL------------------- 448 +C G RLR EA V + +S+ A +F + Sbjct: 407 ACAGARLRPEALWWRVRGLDMAGFLALSVADARQFLLDFDRDDDGDGHGDGAAAGSARAR 466 Query: 449 -----AGQRAKIAEKILKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGA 503 +R A + E RL L +VGL YLTL R++ TLSGGE QR+ L +GA Sbjct: 467 GARGDGRERDDAAALLRAECLRRLSTLADVGLAYLTLDRASRTLSGGETQRVALTGALGA 526 Query: 504 GLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPG 563 L G + V+DEPS+GLH D RL + L NTV+VVEHD I+ AD V+++GPG Sbjct: 527 SLAGALIVMDEPSVGLHPHDVGRLAEVVQRLAAADNTVLVVEHDWALIQRADRVVELGPG 586 Query: 564 AGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEVPKKRVPANPEKVLKLTGARGNNL 623 AG GG VV +G E +++ ++ TG+ G R + ++ A ++L A G+NL Sbjct: 587 AGREGGRVVFDGAPEELLSS-DTATGRAHRGARAAALVRREPSA----WIELRAATGHNL 641 Query: 624 KDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAEPAPYRDIQGLEHFD 683 + V + +P GL TC+TGVSGSGKS+LI TL P L G P+ + G + Sbjct: 642 RGVDVAIPRGLLTCVTGVSGSGKSSLILGTLAPAVIAALGGEVEEPALPHAALAGADALA 701 Query: 684 KVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESRARGYTPGRFSFNVRGGRCEAC 743 + +DQSP+GRT R NPATY + +R A + ARG + G FSFNV GGRCE+C Sbjct: 702 DAVVVDQSPLGRTARGNPATYVKAWDWIRGALAKTEMAAARGLSAGAFSFNVPGGRCESC 761 Query: 744 QGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAV 803 +G+G VEM FL D+ C C GKR+ LE++Y+GK + ++L+M+++EA F + Sbjct: 762 KGEGAETVEMQFLADVSFSCPDCGGKRFVGPVLEVRYQGKNVVDILEMSVDEALACFSS- 820 Query: 804 PALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGL 863 L R+LQ ++DVGL Y+RLGQ TLSGGEAQR+KLA L++ G L ILDEPT GL Sbjct: 821 RTLTRRLQPVVDVGLGYLRLGQPLNTLSGGEAQRLKLAEALARTKAG-GLVILDEPTAGL 879 Query: 864 HFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPET 923 H D+ L L L +G+T+VV+EH++ + ADWIVDLGP G+ GG I+ SGTPE Sbjct: 880 HAQDVVPLRRSLEALVARGDTVVVVEHDMALAAHADWIVDLGPGAGAHGGTIVASGTPEQ 939 Query: 924 VAECEASHTA 933 VA + S TA Sbjct: 940 VAAAQGSSTA 949 Score = 533 bits (1373), Expect = e-149, Method: Composition-based stats. Identities = 261/540 (48%), Positives = 347/540 (64%), Gaps = 5/540 (0%) Query: 404 RPCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEI 463 + C C GTRL AR V V + + S+ A +++L G+ A IA L E Sbjct: 1301 KTCPDCAGTRLSPLARAVTVAGWSIAELFGRSVLEAGRALADMQLDGRDATIAAVPLAEA 1360 Query: 464 GDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRD 523 RL FL +VG+ YL L R A TLSGGE QR+RLA+Q+G+GL G++YVLDEP+IGLH RD Sbjct: 1361 RARLSFLASVGVGYLELDRPAATLSGGETQRVRLAAQLGSGLTGILYVLDEPTIGLHPRD 1420 Query: 524 NERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAV 583 LL + L + GN+++VVEHD D IRAAD ++DIGPG G HGG ++A G ++A Sbjct: 1421 TGVLLDAMRALVERGNSLVVVEHDPDTIRAADFLVDIGPGGGHHGGRLLACGAAAEVLAE 1480 Query: 584 PESLTGQYMSGKRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSG 643 + T + +R VP +R + L+L GAR +NL+D+ L LP+G +TGVSG Sbjct: 1481 DRAPTAAAL--RRPPPVPAQRRVPDDAAQLELRGARRHNLRDLDLRLPLGCLVAVTGVSG 1538 Query: 644 SGKSTLINDTLFPIAQRQLNGATIAEPA---PYRDIQGLEHFDKVIDIDQSPIGRTPRSN 700 SGKSTLI + L L P YR+++G E + ++IDQSPIGRT RS Sbjct: 1539 SGKSTLIREVLLEAVGDALARPARTPPRSQRAYRELRGAEALRRAVEIDQSPIGRTSRSV 1598 Query: 701 PATYTGVFTPVRELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIY 760 PATY GV+ +R L A PE+RARGY RFSFN GRC C+G G +K EM FLPD+ Sbjct: 1599 PATYVGVWNHIRALLANTPEARARGYGAARFSFNTAEGRCPTCEGQGRLKAEMAFLPDVE 1658 Query: 761 VPCDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTY 820 + C+ C G R++ +TL+I ++G+ E+L + I EA E F +V +AR L L ++GL Y Sbjct: 1659 MDCEACAGMRFDPDTLDITWRGRNAGEILALEIGEAAEVFASVSKVARPLALLDELGLGY 1718 Query: 821 IRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRD 880 ++LGQ ++TLSGGEAQR+KL EL R G TLY++DEPTTGLH D+ +LL +L +L + Sbjct: 1719 LKLGQPSSTLSGGEAQRLKLVSELGARSPGGTLYVMDEPTTGLHRDDVVRLLALLDRLVE 1778 Query: 881 QGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLKPML 940 +G+T+VVIEH+ DV+ ADWIVDLGPEGG+ GG +LVSG PE VA C SHT L L Sbjct: 1779 RGDTVVVIEHHTDVMLAADWIVDLGPEGGAEGGRVLVSGPPEDVAACAESHTGAVLAAEL 1838 Score = 273 bits (697), Expect = 3e-71, Method: Composition-based stats. Identities = 117/293 (39%), Positives = 173/293 (59%), Gaps = 15/293 (5%) Query: 3 KIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYAR 62 IE+ GAR HNL++++L +PR++L+VVTG SGSGKS+LAFD LYAEGQRRY+E+LS YAR Sbjct: 998 DIEILGAREHNLRDLSLRLPREQLVVVTGPSGSGKSTLAFDVLYAEGQRRYLETLSPYAR 1057 Query: 63 QFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCPD 122 Q++ + +P VD + G+ P++++EQ+ STV TITE+ YLR+++AR G CPD Sbjct: 1058 QYMPQLPRPAVDRVLGVPPSVALEQRVHRGGAGSTVATITEVAHYLRVMYARAGLLHCPD 1117 Query: 123 HDVPLAAQTVSQMVDNVLSQPEG--------KRLMLLAPIIKERKGEHTKTLENLASQGY 174 +V +A + + ++ + +++AP+++ RKG H + L G Sbjct: 1118 CEVAIAPRAPELLARDLAALARPDGDGDGDGDAWLVMAPVVRGRKGLHRELLARAREDGI 1177 Query: 175 IRARIDGEVCDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVV 234 RARIDG L KL+ ++H +E+V+ + + A LSGG+ V Sbjct: 1178 ERARIDGAFTALRAGMKLDRYREHDVELVIAEL---PAEDAAMPAALGRAAALSGGSVRV 1234 Query: 235 ADMDDPKAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQ 287 +ELL S ACP CG EL+PR+FSF+ GACP C+G GV + Sbjct: 1235 ----RRGQQELLLSTQRACPSCGTGFPELDPRMFSFHTRQGACPACEGRGVIE 1283 Score = 218 bits (555), Expect = 9e-55, Method: Composition-based stats. Identities = 106/347 (30%), Positives = 152/347 (43%), Gaps = 47/347 (13%) Query: 406 CASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGD 465 C C G R V + + I +MS+ A+ F++ L Sbjct: 781 CPDCGGKRFVGPVLEVRYQGKNVVDILEMSVDEALACFSSRTLT---------------R 825 Query: 466 RLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNE 525 RL+ +V+VGL YL L + TLSGGEAQR++LA + G + +LDEP+ GLH +D Sbjct: 826 RLQPVVDVGLGYLRLGQPLNTLSGGEAQRLKLAEALARTKAGGLVILDEPTAGLHAQDVV 885 Query: 526 RLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPE 585 L +L L G+TV+VVEHD AD ++D+GPGAG HGG +VA G E + A Sbjct: 886 PLRRSLEALVARGDTVVVVEHDMALAAHADWIVDLGPGAGAHGGTIVASGTPEQVAAAQG 945 Query: 586 SLTGQYM-----------------SGKRKIEVPKKRVPANPEKVLK---------LTGAR 619 S T ++ +G+ V R + + GAR Sbjct: 946 SSTAPHLAAALAAHSSSTRTKSSPAGRASASVGASRAAQPGPVWQRAPIAGADIEILGAR 1005 Query: 620 GNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAEPAPYRDIQGL 679 +NL+D++L LP +TG SGSGKSTL D L+ QR+ Y Sbjct: 1006 EHNLRDLSLRLPREQLVVVTGPSGSGKSTLAFDVLYAEGQRRYLETLSPYARQYMPQLPR 1065 Query: 680 EHFDKV------IDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPE 720 D+V + ++Q S AT T V +R ++A Sbjct: 1066 PAVDRVLGVPPSVALEQRVHRGGAGSTVATITEVAHYLRVMYARAGL 1112 Score = 160 bits (406), Expect = 2e-37, Method: Composition-based stats. Identities = 82/237 (34%), Positives = 114/237 (48%), Gaps = 22/237 (9%) Query: 723 ARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHF-------LPDIYVPCDQCKGKRYNRET 775 P FSF+ R G C AC+G GVI+ C C G R + Sbjct: 1256 FPELDPRMFSFHTRQGACPACEGRGVIEPATRRKRGKRAAAEAPPKTCPDCAGTRLSPLA 1315 Query: 776 LEIKYKGKTIHEVLDMTIEEAREFFDAV--------------PALARKLQTLMDVGLTYI 821 + G +I E+ ++ EA + +L L VG+ Y+ Sbjct: 1316 RAVTVAGWSIAELFGRSVLEAGRALADMQLDGRDATIAAVPLAEARARLSFLASVGVGYL 1375 Query: 822 RLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQ 881 L + A TLSGGE QRV+LA +L TG LY+LDEPT GLH D LLD + L ++ Sbjct: 1376 ELDRPAATLSGGETQRVRLAAQLGSGLTG-ILYVLDEPTIGLHPRDTGVLLDAMRALVER 1434 Query: 882 GNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLKP 938 GN++VV+EH+ D I+ AD++VD+GP GG GG +L G V + + TA L+ Sbjct: 1435 GNSLVVVEHDPDTIRAADFLVDIGPGGGHHGGRLLACGAAAEVLAEDRAPTAAALRR 1491 Score = 156 bits (395), Expect = 3e-36, Method: Composition-based stats. Identities = 68/199 (34%), Positives = 101/199 (50%), Gaps = 15/199 (7%) Query: 403 NRPCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKE 462 C +C G R + + I + IG A E F ++ + Sbjct: 1658 EMDCEACAGMRFDPDTLDITWRGRNAGEILALEIGEAAEVFASVS--------------K 1703 Query: 463 IGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQI-GAGLVGVMYVLDEPSIGLHQ 521 + L L +GL YL L + + TLSGGEAQR++L S++ G +YV+DEP+ GLH+ Sbjct: 1704 VARPLALLDELGLGYLKLGQPSSTLSGGEAQRLKLVSELGARSPGGTLYVMDEPTTGLHR 1763 Query: 522 RDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIM 581 D RLL L L + G+TV+V+EH D + AAD ++D+GP G GG V+ GP E + Sbjct: 1764 DDVVRLLALLDRLVERGDTVVVIEHHTDVMLAADWIVDLGPEGGAEGGRVLVSGPPEDVA 1823 Query: 582 AVPESLTGQYMSGKRKIEV 600 A ES TG ++ + + Sbjct: 1824 ACAESHTGAVLAAELQRSA 1842 Score = 65.8 bits (159), Expect = 7e-09, Method: Composition-based stats. Identities = 41/171 (23%), Positives = 69/171 (40%), Gaps = 33/171 (19%) Query: 3 KIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYAR 62 ++E+RGAR HNL++++L +P L+ VTG+SGSGKS+L + L +E++ Sbjct: 1507 QLELRGARRHNLRDLDLRLPLGCLVAVTGVSGSGKSTLIREVL--------LEAVGDALA 1558 Query: 63 QFLSLMEKP-----DVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFA---- 113 + + ++ E L A+ I+Q RS T + +++R L A Sbjct: 1559 RPARTPPRSQRAYRELRGAEALRRAVEIDQSPIGRTSRSVPATYVGVWNHIRALLANTPE 1618 Query: 114 -------------RVGEPRCPDHDVPLAAQTVSQM---VDNVLSQPEGKRL 148 E RCP + + V+ G R Sbjct: 1619 ARARGYGAARFSFNTAEGRCPTCEGQGRLKAEMAFLPDVEMDCEACAGMRF 1669 >UniRef50_Q0A6L0 Excinuclease ABC, A subunit n=4 Tax=Bacteria RepID=Q0A6L0_ALHEH Length = 2175 Score = 841 bits (2173), Expect = 0.0, Method: Composition-based stats. Identities = 397/1015 (39%), Positives = 562/1015 (55%), Gaps = 81/1015 (7%) Query: 2 DKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYA 61 I++ AR HNLK +++ IPR++L V+TGLSGSGKS++AFD L+ EGQRRY+ESL+AYA Sbjct: 1163 HYIDIHHAREHNLKGVDIRIPRNRLTVITGLSGSGKSTVAFDILFNEGQRRYLESLNAYA 1222 Query: 62 RQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCP 121 RQF+ +PDVD +EG+ P ++IEQ+++ +STV T+TE+H +LRLL+AR+G CP Sbjct: 1223 RQFVQPAARPDVDSVEGIPPTVAIEQRTSRGGRKSTVATLTELHHFLRLLYARLGTWHCP 1282 Query: 122 DHDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARIDG 181 VP+ AQT + +L + G+ L LLAP++ RKG + + A +G +DG Sbjct: 1283 ACQVPIQAQTPEAIHAQLLREHRGETLHLLAPMVSGRKGIYKELARWAAGKGVGHLYVDG 1342 Query: 182 EVCDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVADMDDPK 241 E +D PKL+ ++H I++ V ++ + Q L ++ ALE G + + Sbjct: 1343 EFLPTADWPKLDRYREHDIDLPVAELRIEPENAQPLRQAIARALEQGKGVLRILTAER-- 1400 Query: 242 AEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQY------------- 288 S ACP C S E +PR FS+N+P G CPTC G G Sbjct: 1401 -TLQTLSTERACPSCQRSFDEPDPRQFSYNSPHGWCPTCYGTGEVLEGFSDEDSGEERHW 1459 Query: 289 ----------------------FDPDRVIQNPELSLAGGAIRGWDRRNFYY--FQMLKSL 324 R + +L + ++ + Sbjct: 1460 RETESDDDALPAPCPTCNGTRLNAEARAVTFQGRTLPELSALTVREARAWFRVMRAHSPQ 1519 Query: 325 ADHYKFDVEAPWGSLSANVHKV-VLYGSGKENIEFKYMNDRGDTSIRRHPFE-------- 375 + +V+ P + V G+ RG+ R P + Sbjct: 1520 PGPKEIEVDDPEAAERGGGRSTPVPSGARPAGGSGPKGGRRGEAETDRCPVDTDPAERAG 1579 Query: 376 -GVLHNMERRYKET--ESSAVREELAKFISNRPCASCEGTRLRREARHV-YVENTPLPAI 431 G L +++ E +A + +S P + E R AR + + P+ Sbjct: 1580 HGWLAPALPAAQDSAAEQAATDRQARDGLSVGPASGTE-KRSSAPARSAPHPASNPVEVA 1638 Query: 432 SDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTLSRSAETLSGGE 491 + G + L L + A IA +L EI RL+FL +VGL YL+L R+A TLSGGE Sbjct: 1639 PPNAHGPGNDNAEPLALTDREATIARDVLPEIHHRLRFLEDVGLGYLSLDRAAPTLSGGE 1698 Query: 492 AQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAI 551 AQRIRLA+Q+G+ L GV YV+DEP+IGLH RDN LL L L GNT++VVEHDED I Sbjct: 1699 AQRIRLAAQLGSNLQGVCYVMDEPTIGLHPRDNRLLLDVLARLEGKGNTIVVVEHDEDTI 1758 Query: 552 RAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEVPKKRVP----- 606 R A+H+ID+GPGAG++GG VVA G +E ++ P S+TG+Y+ + +R Sbjct: 1759 RRAEHIIDLGPGAGINGGRVVAAGTVEQLLQHPRSITGRYLRHPLHHPLRGQRRTVSLAT 1818 Query: 607 -----------ANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLF 655 VL L +NL+ L LP+G +TGVSGSGKS+LI L Sbjct: 1819 TPAGSHPQPTTPAEHDVLTLHAPTLHNLQGHDLHLPLGRLMVVTGVSGSGKSSLIRGVLK 1878 Query: 656 PIAQRQLNGATIAEPAP---YRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVR 712 P +R L+ P + G + D+V+++DQ+PIG+TPRS PATY G + +R Sbjct: 1879 PALKRLLSRKRDQATPPLPHCAGLDGWQAVDRVLEVDQTPIGKTPRSCPATYIGFWDDIR 1938 Query: 713 ELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYN 772 +L+AG E+ RGY PGRFSFN + GRC C G GV ++EM+FLPD+ VPC+ C G R+ Sbjct: 1939 KLYAGTQEASLRGYGPGRFSFNTKDGRCPDCDGQGVRRIEMNFLPDVTVPCETCHGLRFT 1998 Query: 773 RETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSG 832 RETL +++KG+ I +VL+M++EEA FF A P + L L VGL Y+ LGQ++ TLSG Sbjct: 1999 RETLAVEWKGRHIGDVLNMSVEEATAFFAAQPRIHHPLTLLEAVGLGYLTLGQASPTLSG 2058 Query: 833 GEAQRVKLARELSK-------RGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTI 885 GEAQR+KL EL+K + T TLY+LDEPT GLH AD+++L+D L +L D G+T+ Sbjct: 2059 GEAQRIKLVTELAKARPDLRAQRTPHTLYVLDEPTVGLHMADVERLIDALQRLVDAGHTV 2118 Query: 886 VVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLKPML 940 VVIEHNLD+I ADW+VD+GPEGG GG ++ +G PE VA ++ T RFL +L Sbjct: 2119 VVIEHNLDLIAEADWVVDIGPEGGDAGGRVVAAGPPEAVAAG-STATGRFLAEVL 2172 Score = 591 bits (1523), Expect = e-167, Method: Composition-based stats. Identities = 224/640 (35%), Positives = 321/640 (50%), Gaps = 64/640 (10%) Query: 2 DKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYA 61 D I VRGAR +NL+ +L IP +L+V+TG+SGSGKSSLAFDT+YAEGQRRYVE+ S YA Sbjct: 4 DCIRVRGARQNNLRGFDLDIPLGELVVITGVSGSGKSSLAFDTVYAEGQRRYVETFSPYA 63 Query: 62 RQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCP 121 RQFL M++P VD I+G+ PAI+I+Q + RSTVGT+TE++D+L+LLFAR + C Sbjct: 64 RQFLDRMDRPAVDRIDGVLPAIAIDQTNPVRTSRSTVGTMTELNDHLKLLFARTAQLYCG 123 Query: 122 DHDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARIDG 181 + T + +L+ G+R M+ A + +K E LA QGY R + Sbjct: 124 GCGKRVQRDTAEGVAARLLAGHAGERAMVTARVAIPKKSSADTLRELLAGQGYTRIHGED 183 Query: 182 EVCDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVADMDDPK 241 +EVV DR ++ D RL E+ E+ L+L G V +D+ + Sbjct: 184 RTH---------------LEVVTDRIRLVPDRRDRLVEALESGLKLGRGHIQVRLLDENR 228 Query: 242 --AEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPE 299 + L +SA+ C C + P LFSFN+P GAC TC G G D VI + Sbjct: 229 EPGKPLRYSADLHCADCDIHYDDPTPGLFSFNSPVGACETCRGFGRVMGIDYRLVIPDDA 288 Query: 300 LSLAGGAIRGWDRRNFYYFQ-MLKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKENIEF 358 LSL GAI+ + Q L A + P+ L + ++ G G Sbjct: 289 LSLEAGAIKPFQSGRSAECQDDLLFHARRRGVATDIPFRDLPEADRQWIIQGEG------ 342 Query: 359 KYMNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGTRLRREA 418 + GV + +++ VR L+++ S PC C G RL+ A Sbjct: 343 ---------KFNGRKWYGVDGYFQYLERKSYKMHVRVLLSRYRSYDPCPDCHGARLKPGA 393 Query: 419 RHVYVE-------------------------------NTPLPAISDMSIGHAMEFFNNLK 447 + L + + + FF ++ Sbjct: 394 LLWRIGNHEDSDAVIDRAERHRPHGATLPEHALHGLPGLHLHDVLTLPLDRCARFFQDIH 453 Query: 448 LAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVG 507 L + AE +L+ I +RL +L VGL YLTL R + TLSGGE QRI L + +G LV Sbjct: 454 LPAPLDEAAEILLEGIRNRLTYLNTVGLGYLTLDRQSRTLSGGEVQRINLTTALGTALVN 513 Query: 508 VMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVH 567 ++VLDEPSIGLH RD +R++ + LRD GN+++VVEHD ++AAD +IDIGPG G Sbjct: 514 TLFVLDEPSIGLHPRDIDRIVTVMHRLRDAGNSLLVVEHDPAVMQAADRLIDIGPGPGER 573 Query: 568 GGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEVPKKRVPA 607 GG++ G ++ SLT Y++G+R++ R Sbjct: 574 GGQITFNGTPAELLRTENSLTADYLTGRRQVVPTNARPDR 613 Score = 360 bits (923), Expect = 2e-97, Method: Composition-based stats. Identities = 165/390 (42%), Positives = 221/390 (56%), Gaps = 25/390 (6%) Query: 574 EGPLEAIMAVPESLTGQYMSGKRKIE----VPKKRVPANPEKVLKLTGARGNNLKDVTLT 629 GP + T + + + GA +NL+ +T+ Sbjct: 742 AGPARSPEKRSSEPTRHHRQAPDSEPNNGSSQAVTPLPPDTPKVTIQGATEHNLQHLTVE 801 Query: 630 LPVG-LFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDI 688 +PV C+TGVSGSGKSTL+ D L R+ G P ++ + G EH D V+ + Sbjct: 802 IPVHPALVCLTGVSGSGKSTLMRDILHNELARR-KGHPGDPPGAFQTLTGDEHIDNVVLV 860 Query: 689 DQSPIGRTPRSNPATYTGVFTPVRELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGV 748 DQSPIG+T RSNPA+YTG F P+R+ +A P +R R YTPG FSFN GRC C G+G Sbjct: 861 DQSPIGKTTRSNPASYTGAFEPIRKAYAAEPLARERQYTPGVFSFNSGKGRCPTCGGNGF 920 Query: 749 IKVEMHFLPDIYVPCDQCKGKRYNRETLEIKY-------------KGKTIHEVLDMTIEE 795 VEM FL D+Y+ C C G RY E LEI+ + I E+LD+T+++ Sbjct: 921 EHVEMQFLSDVYLRCPDCNGSRYRPEILEIQRLPDPGADLGTAGDGPRHIAEILDLTVDQ 980 Query: 796 AREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQT--- 852 A EFF PA+ R L+ L VGL Y++LGQ TLSGGEAQR+KLA L+K + Sbjct: 981 ATEFFRTTPAVLRSLEPLQAVGLGYLKLGQPVPTLSGGEAQRLKLAGHLAKTSGRRKQQQ 1040 Query: 853 --LYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADWIVDLGPEGGS 910 L++ DEPTTGLHF D+ LL +L+D+G+ ++VIEHNLDV++ ADWI+DLGPEGG Sbjct: 1041 RLLFLFDEPTTGLHFHDVAVLLSAFRRLQDEGHALLVIEHNLDVMRAADWIIDLGPEGGD 1100 Query: 911 GGGEILVSGTPETVAECEA-SHTARFLKPM 939 GG ++ +GTPE + SHT R L Sbjct: 1101 RGGRLVCTGTPEQIMAQSDLSHTGRALAEY 1130 Score = 210 bits (534), Expect = 3e-52, Method: Composition-based stats. Identities = 129/493 (26%), Positives = 193/493 (39%), Gaps = 82/493 (16%) Query: 403 NRPCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKE 462 C C G+R R E + P + L L +A + Sbjct: 932 YLRCPDCNGSRYRPEILEIQRLPDPGADLGTAG-DGPRHIAEILDLTVDQATEFFRTTPA 990 Query: 463 IGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGA------GLVGVMYVLDEPS 516 + L+ L VGL YL L + TLSGGEAQR++LA + ++++ DEP+ Sbjct: 991 VLRSLEPLQAVGLGYLKLGQPVPTLSGGEAQRLKLAGHLAKTSGRRKQQQRLLFLFDEPT 1050 Query: 517 IGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGP 576 GLH D LL L+D G+ ++V+EH+ D +RAAD +ID+GP G GG +V G Sbjct: 1051 TGLHFHDVAVLLSAFRRLQDEGHALLVIEHNLDVMRAADWIIDLGPEGGDRGGRLVCTGT 1110 Query: 577 LEAIMAVPE-SLTGQYMS-----------------GKRKIEVPKKRVPANPEKVLKLTGA 618 E IMA + S TG+ ++ G E + + + A Sbjct: 1111 PEQIMAQSDLSHTGRALAEYTGALERLRTTAEASEGAASGEPGPGMSGRGTQHYIDIHHA 1170 Query: 619 RGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQL------NGATIAEPAP 672 R +NLK V + +P T ITG+SGSGKST+ D LF QR+ +PA Sbjct: 1171 REHNLKGVDIRIPRNRLTVITGLSGSGKSTVAFDILFNEGQRRYLESLNAYARQFVQPAA 1230 Query: 673 YRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVP------------- 719 D+ +E + I+Q +S AT T + +R L+A + Sbjct: 1231 RPDVDSVEGIPPTVAIEQRTSRGGRKSTVATLTELHHFLRLLYARLGTWHCPACQVPIQA 1290 Query: 720 ----------ESRARGYTPGRFSFNVRG--------GRCEACQGDGVIKVEMHFLPDIYV 761 RG T + V G R A +G G + V+ FLP Sbjct: 1291 QTPEAIHAQLLREHRGETLHLLAPMVSGRKGIYKELARWAAGKGVGHLYVDGEFLP---- 1346 Query: 762 PCDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVG---L 818 D K RY +D+ + E R + L + + ++ G L Sbjct: 1347 TADWPKLDRYREHD-------------IDLPVAELRIEPENAQPLRQAIARALEQGKGVL 1393 Query: 819 TYIRLGQSATTLS 831 + ++ TLS Sbjct: 1394 RILTAERTLQTLS 1406 Score = 154 bits (390), Expect = 1e-35, Method: Composition-based stats. Identities = 69/222 (31%), Positives = 104/222 (46%), Gaps = 46/222 (20%) Query: 760 YVPCDQCKGKRYNRETLEIK-------------------------------YKGKTIHEV 788 Y PC C G R L + G +H+V Sbjct: 378 YDPCPDCHGARLKPGALLWRIGNHEDSDAVIDRAERHRPHGATLPEHALHGLPGLHLHDV 437 Query: 789 LDMTIEEAREFFDAV--------------PALARKLQTLMDVGLTYIRLGQSATTLSGGE 834 L + ++ FF + + +L L VGL Y+ L + + TLSGGE Sbjct: 438 LTLPLDRCARFFQDIHLPAPLDEAAEILLEGIRNRLTYLNTVGLGYLTLDRQSRTLSGGE 497 Query: 835 AQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDV 894 QR+ L L TL++LDEP+ GLH DI +++ V+H+LRD GN+++V+EH+ V Sbjct: 498 VQRINLTTALGTALVN-TLFVLDEPSIGLHPRDIDRIVTVMHRLRDAGNSLLVVEHDPAV 556 Query: 895 IKTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFL 936 ++ AD ++D+GP G GG+I +GTP + E S TA +L Sbjct: 557 MQAADRLIDIGPGPGERGGQITFNGTPAELLRTENSLTADYL 598 Score = 82.7 bits (203), Expect = 7e-14, Method: Composition-based stats. Identities = 39/117 (33%), Positives = 57/117 (48%), Gaps = 6/117 (5%) Query: 610 EKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAE 669 +++ GAR NNL+ L +P+G ITGVSGSGKS+L DT++ QR+ Sbjct: 3 RDCIRVRGARQNNLRGFDLDIPLGELVVITGVSGSGKSSLAFDTVYAEGQRRYVETFSPY 62 Query: 670 PAPYRDIQGLEHFDKV------IDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPE 720 + D D++ I IDQ+ RT RS T T + ++ LFA + Sbjct: 63 ARQFLDRMDRPAVDRIDGVLPAIAIDQTNPVRTSRSTVGTMTELNDHLKLLFARTAQ 119 Score = 77.3 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 38/162 (23%), Positives = 65/162 (40%), Gaps = 27/162 (16%) Query: 3 KIEVRGARTHNLKNINLVIPRD-KLIVVTGLSGSGKSSLAFDTLYAE-GQRRYVESLSAY 60 K+ ++GA HNL+++ + IP L+ +TG+SGSGKS+L D L+ E +R+ Sbjct: 784 KVTIQGATEHNLQHLTVEIPVHPALVCLTGVSGSGKSTLMRDILHNELARRKGHPGDPPG 843 Query: 61 ARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARV----- 115 A Q L+ E + + ++Q RS + T + +R +A Sbjct: 844 AFQTLTGD--------EHIDNVVLVDQSPIGKTTRSNPASYTGAFEPIRKAYAAEPLARE 895 Query: 116 ------------GEPRCPDHDVPLAAQTVSQMVDNVLSQPEG 145 G+ RCP Q + +V + Sbjct: 896 RQYTPGVFSFNSGKGRCPTCGGNGFEHVEMQFLSDVYLRCPD 937 >UniRef50_Q9PK60 UvrABC system protein A n=10 Tax=Chlamydia RepID=UVRA_CHLMU Length = 1787 Score = 835 bits (2157), Expect = 0.0, Method: Composition-based stats. Identities = 332/939 (35%), Positives = 507/939 (53%), Gaps = 30/939 (3%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 63 + + G NLKN+ + ++++ TG+SGSGKSSLAF+T+YA G++RY+ +L ++ Sbjct: 5 VRLSGITVRNLKNVTVEFCPREIVLFTGVSGSGKSSLAFNTIYAAGRKRYITTLPSFFAT 64 Query: 64 FLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCPDH 123 + + P V +EGLSP ++++Q + + +TVG+ TEI+ YL LLF+ G+ P Sbjct: 65 RIHSLPDPAVKKVEGLSPTVAVKQNFFAQHVHATVGSTTEINSYLALLFSLDGQAYDPIT 124 Query: 124 DVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARIDGEV 183 PL + +++ + + P+G +L LLAP+ + L QG+ + IDGE+ Sbjct: 125 LRPLTLYSKEKILAEIAAIPDGTQLTLLAPLPAGDILRVRECLR----QGFTKILIDGEI 180 Query: 184 CDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVADMDDPKAE 243 + L ++++D T RL S T L++ G + + Sbjct: 181 SPIHK--FLATGVPVPSQLIIDTLIKNASNTPRLKVSLFTTLDIGHGECCLHF----DNQ 234 Query: 244 ELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGV-QQYFDPDRVIQNPELSL 302 + +FS P + L P LFS ++ CP C G G+ DP + QN + Sbjct: 235 KRVFSTQTTLPETQNTYTPLSPDLFSSHSHKDRCPQCHGSGIFVSINDPSIIQQNLSIEK 294 Query: 303 AGGAIRGWDRRNFYYFQMLKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKENIEFKYMN 362 G Y + +SLAD+ F + PW LS + + LYG ++ K + Sbjct: 295 NCCPFAG-SCSILLYKTIYQSLADNLGFSLSTPWQDLSPEIQHIFLYGKEGLSLPVKLFD 353 Query: 363 DR-GDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGTRLRREARHV 421 G T+ ++GVL+ + + + + L K S C C+ T L A Sbjct: 354 GTLGKTTQTHKQWKGVLNEIGEKIRFANKPS--RYLPKGTSYTECPRCQKTGLSDYANAA 411 Query: 422 YVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTLS 481 + MS+ F N L + E++++ + RL L+++GL YL+ Sbjct: 412 KWHGKSFADLQQMSLQELFIFLNQL---PPKDPAIEEVIQGLKARLAMLIDLGLPYLSPE 468 Query: 482 RSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTV 541 RS TLSGGE +R LA +GA L+GV YVLDEPSIGLH +D +L+ + LRD GNT+ Sbjct: 469 RSVNTLSGGEQERTALAKHLGAELMGVTYVLDEPSIGLHPQDTYKLMDVIKKLRDQGNTI 528 Query: 542 IVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEVP 601 ++VEHDE I AD VID+GPGAG+ GGEVV G + +A SLT QY+ +++I +P Sbjct: 529 LLVEHDEQMISLADRVIDVGPGAGIFGGEVVFNGTPKEFLANSHSLTAQYLRQEQQIPIP 588 Query: 602 KKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQ 661 KR + + L+ A +NLK++T+++P+G T +TGVSGSGKS+LINDTL P + Sbjct: 589 AKRQTSLGS--ITLSRANKHNLKNLTVSIPLGQLTVVTGVSGSGKSSLINDTLVPCVEEF 646 Query: 662 LNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPES 721 + + ++ +++ I++ GR+ RS TY F +R+LFA P Sbjct: 647 IEQGSCP------NLAVQGKLSRLVHINRDLPGRSQRSISLTYIKAFDELRQLFAEQPRC 700 Query: 722 RARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKYK 781 + G T FSFN G C C G G I + + C C GKR+ + LEI+YK Sbjct: 701 KPLGLTKSHFSFNTPLGACSECGGLGSITAMDN---QDSITCPSCSGKRFLPQVLEIRYK 757 Query: 782 GKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLA 841 KTI ++L+MT EA FF P++ K+Q L +GL Y+ LG+ +LSGGE QR+KLA Sbjct: 758 NKTIADILEMTAYEAESFFLDQPSIHNKIQALCTLGLQYLPLGRPLYSLSGGEIQRLKLA 817 Query: 842 RELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADWI 901 ELS TLY+LDEPTTGLH D++QL+ VL L DQG+++V+IEHN+ V+K AD++ Sbjct: 818 CELSNPVKHPTLYVLDEPTTGLHTHDVKQLIHVLQSLTDQGHSVVIIEHNMHVVKIADYV 877 Query: 902 VDLGPEGGSGGGEILVSGTPETVAECEASHTARFLKPML 940 ++LGPEGG+ GG ++ S +PE + + + T+ L+P L Sbjct: 878 LELGPEGGNKGGCLIASCSPEELI-HKHTPTSLALRPFL 915 Score = 397 bits (1019), Expect = e-108, Method: Composition-based stats. Identities = 213/919 (23%), Positives = 371/919 (40%), Gaps = 83/919 (9%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 63 I + A HNLK+I++ IPR L VTG S SGK SL FD L+A G Y E Y RQ Sbjct: 937 IIITNAHHHNLKHIDVSIPRYALTTVTGPSASGKHSLVFDVLHAAGNISYAELFPPYIRQ 996 Query: 64 -FLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCPD 122 + P VD + GLSP I+IE+ S ++ S V + EI D L LF ++G P P Sbjct: 997 ALIKKTPLPSVDKVIGLSPVIAIEKNSAKNSSHS-VASALEISDMLEELFTQIGRPYSPV 1055 Query: 123 HDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARIDGE 182 L + + + +L + + P + + + + +G+++ + + Sbjct: 1056 SGDLLKEVSPQTIAEELLENYAQGYVTITIPF--PPEEDFFSYTQEMLREGFLKLYANEQ 1113 Query: 183 VCDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGG-TAVVADMDDPK 241 + DL P L+ +V+ K+ + + S A S + + Sbjct: 1114 LYDLEGPFPDCLESP---ALVIHHVKILEKNIPSILSSLSLAFSKSSSIRLHIENYGITT 1170 Query: 242 AEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPELS 301 ++ G S S +N CP C G G F ++ Sbjct: 1171 SKTYQL---GLQDSLGNSFP-------SNDNTTHLCPFCHGNGSLSTFS---ILPYKNRF 1217 Query: 302 LAGGAIRGWDRRNFYY-FQMLKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKENIEFKY 360 + + + L + A + + + + + G+ Sbjct: 1218 AEHTPLSLFTSLFPNQDPTPIYPLLEELGIPSIALFQEMDDHSFQKLCLGT--------- 1268 Query: 361 MNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGTRLRREARH 420 ++ F+ + + T IS PC C+G Sbjct: 1269 --------LQNPGFDALCTKAMLAHPTTNFPTYL------ISETPCNQCQGNGTYTYEHC 1314 Query: 421 VYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTL 480 + + L I + +F L L ++ +I +L+ L VGL+ + L Sbjct: 1315 TRIHDISLSDIYQSDVPFLKKFL--LSLGKDL-----PLVSDIFQKLELLERVGLSQVIL 1367 Query: 481 SRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNT 540 + +LS GE ++ LA +GL V+Y+L++P G+H +D LL + L NT Sbjct: 1368 GQEQSSLSDGERYQLLLAKAFSSGLTDVIYLLEDPLAGIHPKDAPSLLSVIKDLVANHNT 1427 Query: 541 VIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEV 600 V+V + + + ADHVI +GP G +GG ++ + + +S K + V Sbjct: 1428 VVVTDREGSLSKHADHVIHLGPEPGPNGGYLLETSAFRDLQPISQSTYISDQIPKLSVSV 1487 Query: 601 PKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQR 660 ++ L++P+ + I+GVSGSGK+TL+ + ++ Sbjct: 1488 LTS------------------AIQIDNLSIPLRSLSTISGVSGSGKTTLLLEGIYKSGCA 1529 Query: 661 QLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPE 720 L + F ++I +D P + RS+ +TY + +R F+ + + Sbjct: 1530 MLE-------------KDPSLFSEIIFLDSHPQPASSRSDISTYFDIAPSLRNFFSSLTQ 1576 Query: 721 SRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKY 780 ++A + FS N + G+C C G G ++ F C C G R E+ Y Sbjct: 1577 AKALNISASMFSPNTKQGQCSDCWGLGYQLIDRAFYAMEKRSCPTCGGFRVQPLVQEVVY 1636 Query: 781 KGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKL 840 +GK ++L ++ E + F + + + LQTL+ GL Y+ LGQ+ ++LS E +K+ Sbjct: 1637 EGKHFGQLLQSSLNEVAKDFSFLKKVQKPLQTLIANGLGYLPLGQNMSSLSLSEKIAIKI 1696 Query: 841 ARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADW 900 + L TL++LD T L LL L L G+T+V+IE++ + AD+ Sbjct: 1697 TKYLFLPPKHPTLFLLDGVATSLDNQQKYTLLSQLKTLVSLGHTVVIIENHPAFSQYADF 1756 Query: 901 IVDLGPEGGSGGGEILVSG 919 ++ +G + I+ SG Sbjct: 1757 LIQMGHKTDKTSSRIIFSG 1775 Score = 200 bits (510), Expect = 1e-49, Method: Composition-based stats. Identities = 87/328 (26%), Positives = 150/328 (45%), Gaps = 25/328 (7%) Query: 403 NRPCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKE 462 + C SC G R + + +N + I +M+ A FF Sbjct: 736 SITCPSCSGKRFLPQVLEIRYKNKTIADILEMTAYEAESFF--------------LDQPS 781 Query: 463 IGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGL-VGVMYVLDEPSIGLHQ 521 I ++++ L +GL YL L R +LSGGE QR++LA ++ + +YVLDEP+ GLH Sbjct: 782 IHNKIQALCTLGLQYLPLGRPLYSLSGGEIQRLKLACELSNPVKHPTLYVLDEPTTGLHT 841 Query: 522 RDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIM 581 D ++L+ L L D G++V+++EH+ ++ AD+V+++GP G GG ++A E ++ Sbjct: 842 HDVKQLIHVLQSLTDQGHSVVIIEHNMHVVKIADYVLELGPEGGNKGGCLIASCSPEELI 901 Query: 582 A--VPESL-TGQYMSGKRKIE-VPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTC 637 P SL ++S +++ +P R + +T A +NLK + +++P T Sbjct: 902 HKHTPTSLALRPFLSQHQELPHLPDLRQQPPIPAAIIITNAHHHNLKHIDVSIPRYALTT 961 Query: 638 ITGVSGSGKSTLINDTLFPIAQRQLNGATIAE-PAPYRDIQGLEHFDKVIDID-----QS 691 +TG S SGK +L+ D L L DKVI + + Sbjct: 962 VTGPSASGKHSLVFDVLHAAGNISYAELFPPYIRQALIKKTPLPSVDKVIGLSPVIAIEK 1021 Query: 692 PIGRTPRSNPATYTGVFTPVRELFAGVP 719 + + A+ + + ELF + Sbjct: 1022 NSAKNSSHSVASALEISDMLEELFTQIG 1049 Score = 88.5 bits (218), Expect = 1e-15, Method: Composition-based stats. Identities = 46/185 (24%), Positives = 67/185 (36%), Gaps = 29/185 (15%) Query: 1 MDKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAY 60 + I + A HNLKN+ + IP +L VVTG+SGSGKSSL DTL Sbjct: 595 LGSITLSRANKHNLKNLTVSIPLGQLTVVTGVSGSGKSSLINDTLV------------PC 642 Query: 61 ARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPR- 119 +F+ P++ LS + I + + RS T + D LR LFA + Sbjct: 643 VEEFIEQGSCPNLAVQGKLSRLVHINRDLPGRSQRSISLTYIKAFDELRQLFAEQPRCKP 702 Query: 120 ----------------CPDHDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHT 163 C + + + GKR + I+ + Sbjct: 703 LGLTKSHFSFNTPLGACSECGGLGSITAMDNQDSITCPSCSGKRFLPQVLEIRYKNKTIA 762 Query: 164 KTLEN 168 LE Sbjct: 763 DILEM 767 Score = 59.6 bits (143), Expect = 6e-07, Method: Composition-based stats. Identities = 25/119 (21%), Positives = 51/119 (42%), Gaps = 6/119 (5%) Query: 609 PEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIA 668 +++L+G NLK+VT+ TGVSGSGKS+L +T++ +++ + Sbjct: 1 MPSIVRLSGITVRNLKNVTVEFCPREIVLFTGVSGSGKSSLAFNTIYAAGRKRYITTLPS 60 Query: 669 EPAPYRDIQGLEHFDKV------IDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPES 721 A KV + + Q+ + + + T + + + LF+ ++ Sbjct: 61 FFATRIHSLPDPAVKKVEGLSPTVAVKQNFFAQHVHATVGSTTEINSYLALLFSLDGQA 119 >UniRef50_Q9Z985 UvrABC system protein A n=5 Tax=Chlamydophila RepID=UVRA_CHLPN Length = 1826 Score = 811 bits (2094), Expect = 0.0, Method: Composition-based stats. Identities = 337/939 (35%), Positives = 515/939 (54%), Gaps = 29/939 (3%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 63 + V G + NLKN+++ ++++++TG+SGSGKSS+AFDTLYA G++RY+ +L + Sbjct: 6 VYVSGIKVRNLKNVSIHFNSEEIVLLTGVSGSGKSSIAFDTLYAAGRKRYISTLPTFFAT 65 Query: 64 FLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCPDH 123 ++ + P V+ I GLSP I+I+Q SH +TVG+ TE+ +L LLF G+ R P Sbjct: 66 TITTLPNPKVEEIHGLSPTIAIKQNHFSHYSHATVGSTTELFSHLALLFTLEGQARDPKT 125 Query: 124 DVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARIDGEV 183 L + +++ ++ EG ++ +LAP++++ + A QG+ + R +G + Sbjct: 126 KEVLDLYSKEKVLSTIMELSEGVQISILAPLLRKD----IAAIHEYAQQGFTKVRCNGTI 181 Query: 184 CDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVADMDDPKAE 243 + + + ++++V+D ++ RL S TALE G V E Sbjct: 182 HPIYSFLTSGIPEDCSVDIVIDTLIKSENNIARLKVSLFTALEFGEGHCSVLS----DEE 237 Query: 244 ELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPELSLA 303 + FS + L +LFS + C C G G+ D +I + LS+ Sbjct: 238 LMTFSTKQQIDDV--TYTPLTQQLFSPHALESRCSLCQGSGIFISIDNPLLI-DENLSIK 294 Query: 304 GGAIRG-WDRRNFYYFQMLKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKENIEFKYMN 362 + ++ Y + ++LAD F++E PW LS + + L G + + + Sbjct: 295 ENCCSFAGNCSSYLYHTIYQALADALNFNLETPWKDLSPEIQNIFLRGKNNLVLPVRLFD 354 Query: 363 DR-GDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGTRLRREARHV 421 G ++ + GVL+++ + + T + L+K +S C+ C+GT L A Sbjct: 355 QTLGKKNLTYKVWRGVLNDIGDKVRYTTKPS--RYLSKGMSAHSCSLCKGTGLGDYASVA 412 Query: 422 YVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTLS 481 E MS+ + FF+ +K + ++IL+ + RL FL+++GL YLT + Sbjct: 413 TWEGKTFTEFQQMSLNNWHVFFSKVKSP---SLSIQEILQGLKQRLSFLIDLGLGYLTPN 469 Query: 482 RSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTV 541 R+ TLSGGE +R +A +G L G+ Y+LDEPSIGLH +D E+L+G + LRD GNTV Sbjct: 470 RALATLSGGEQERTAIAKHLGGELFGITYILDEPSIGLHPQDTEKLIGVIKKLRDQGNTV 529 Query: 542 IVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEVP 601 I+VEH+E I AD +IDIGPGAG+ GGEV+ G E + SLT +Y+ + I +P Sbjct: 530 ILVEHEERMISLADRIIDIGPGAGIFGGEVLFNGKPEDFLMNSSSLTAKYLRQELTIPIP 589 Query: 602 KKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQ 661 + R L LT A +NLK++++ LP+ +TGVSGSGKS+LIN+TL P + Sbjct: 590 ESREAPT--SWLLLTEATIHNLKNLSIRLPLARLIGVTGVSGSGKSSLINNTLVPAIESF 647 Query: 662 LNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPES 721 L P ++I I + GR+ RS P TY F +RELFA P S Sbjct: 648 LKQEN-----PKNLHFEWGCIGRLIHITRDLPGRSQRSIPLTYIKAFDDIRELFASQPRS 702 Query: 722 RARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKYK 781 +G T FSFN G C CQG G + + D +PC +C+GKRY+ E LEI Y+ Sbjct: 703 LRQGLTKAHFSFNQPQGACIQCQGLGTMTISD---DDTPIPCSECQGKRYHSEVLEILYE 759 Query: 782 GKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLA 841 GK I ++LDMT EA +FF + P + K+ L + L Y+ LG+ +TLSGGE QR+KLA Sbjct: 760 GKNIADILDMTAYEAEKFFISHPKIHEKIHALCSLRLDYLPLGRPLSTLSGGEIQRLKLA 819 Query: 842 RELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADWI 901 EL QTLY+LDEPTTGLH DIQ L++VL L G+T++VIEHN+ V+K D++ Sbjct: 820 HELLFASPKQTLYVLDEPTTGLHTHDIQALIEVLLSLTYLGHTVLVIEHNMHVVKVCDYV 879 Query: 902 VDLGPEGGSGGGEILVSGTPETVAECEASHTARFLKPML 940 ++LGPEGG GG +L S TP+ + + + TA+ L P + Sbjct: 880 LELGPEGGDLGGYLLASCTPKDLIQL-NTPTAKALAPYI 917 Score = 490 bits (1262), Expect = e-137, Method: Composition-based stats. Identities = 239/937 (25%), Positives = 416/937 (44%), Gaps = 60/937 (6%) Query: 3 KIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYAR 62 I ++ A +NLK+I+L +PR+ LI + G SGK SL FD LYA G Y E Y R Sbjct: 938 DILIKDAYQNNLKHIDLALPRNSLIAIAGPGASGKHSLVFDILYASGNIAYAELFPPYIR 997 Query: 63 Q-FLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCP 121 Q L P V ++GLSP IS+ + S+S+ T+ + + + L LFA +GEP P Sbjct: 998 QGLLKETPLPSVGEVKGLSPVISVRKCSSSNRSYHTIASALGLSNGLEKLFAILGEPFSP 1057 Query: 122 DHDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARIDG 181 + L+ T ++D++L + + + +PI E L+ +G+I+ +G Sbjct: 1058 LTEEKLSKTTPQTIIDSLLKSYKDDYVTITSPIPLGSDLEI--FLQEKQKEGFIKLYSEG 1115 Query: 182 EVCDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVADMDDPK 241 + DL + L L + +V+ KV + L + A LS + + K Sbjct: 1116 NLYDLDERLPLNLIEP---AIVIQHTKVSPKNSSSLLSAISVAFSLS---SEIWIYISQK 1169 Query: 242 AEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPELS 301 + L + G E+ +L S ++P G C TC G G S Sbjct: 1170 KQRKLSYSLGWKDKKGRLYPEITHQLLSSDHPEGRCLTCGGRGEILKI-----------S 1218 Query: 302 LAGGAIRGWDRRNFYYFQMLKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKENIEFKYM 361 L + ++ L+ + + P L + + + ++ Sbjct: 1219 LEE------HKEKIAHYTPLEFFSLFFPKSYMKPVQKLLKDE-------NASQPLKLLTT 1265 Query: 362 NDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGTRLRREARHV 421 + + F G+ + + +TES + + ++ C +C+G+ L A +V Sbjct: 1266 KEFLNFCRGSSEFPGMNALLMEQL-DTESDSP--LIKPLLALTSCPACKGSGLNDYANYV 1322 Query: 422 YVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTLS 481 + NT L I F N + I++++ +RL F+ VGL+Y+TL Sbjct: 1323 RINNTSLLDIYQEDATFLESFLNTIGTDDT-----RSIIQDLMNRLTFISKVGLSYITLG 1377 Query: 482 RSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTV 541 + +TLS GE R+ LA +I L ++Y+ +EP GLH +D ++ L L NTV Sbjct: 1378 QRQDTLSDGENYRLHLAKKISINLTNIVYLFEEPLSGLHPQDLPTIVQLLKELVANNNTV 1437 Query: 542 IVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGP---LEAIMAVPESLTGQYMSGKRKI 598 I + I ADH I +GPG+G GG ++ + T I Sbjct: 1438 IATDRSCSLIPHADHAIFLGPGSGPQGGFLMDSDTEVCPSVDLHANVPQTEVCPKAPLSI 1497 Query: 599 EVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIA 658 K ++++++ ++ P+ I GVSGSGK++L+ + A Sbjct: 1498 S---KANHTRGSDRTLKVNLSIHHIQNLKVSAPLHALVAIGGVSGSGKTSLLLEGFKKQA 1554 Query: 659 QRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGV 718 + +G F ++ ID PI + RS+ +TY + +R +A + Sbjct: 1555 E-------------LLIAKGTTTFSDLVVIDSHPIASSQRSDISTYFDIAPSLRAFYASL 1601 Query: 719 PESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEI 778 +++A + FS N + G+C CQG G ++ F PC C G R E+ Sbjct: 1602 TQAKALNISSTMFSTNTKQGQCSDCQGLGYQWIDRAFYALEKRPCPTCSGFRIQPLAQEV 1661 Query: 779 KYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRV 838 Y+GK E+L IE F + + + L+ L+D+GL Y+ +GQ ++LS E + Sbjct: 1662 LYEGKHFGELLHTPIETVALRFPFIKKIQKPLKALLDIGLGYLPIGQKLSSLSVSEKTAL 1721 Query: 839 KLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTA 898 K A L + TL+++DE + L Q L + L L + G++++ I+H++ ++K+A Sbjct: 1722 KTAYFLYQTPETPTLFLIDELFSSLDPIKKQHLPEKLRSLINSGHSVIYIDHDVKLLKSA 1781 Query: 899 DWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARF 935 D+++++GP G GG++L SG+P+ + + S ++ Sbjct: 1782 DYLIEIGPGSGKQGGKLLFSGSPKDIYASKDSLLKKY 1818 >UniRef50_C4RNF2 Excinuclease ABC, A subunit n=1 Tax=Micromonospora sp. ATCC 39149 RepID=C4RNF2_9ACTO Length = 894 Score = 779 bits (2013), Expect = 0.0, Method: Composition-based stats. Identities = 382/951 (40%), Positives = 532/951 (55%), Gaps = 86/951 (9%) Query: 2 DKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYA 61 ++I +RG R HNL+ L +PR L VVTG+SGSGKSSLAFDT+YAEG R+Y++SLSA+ Sbjct: 5 ERIVLRGVRQHNLRIGELSLPRGGLTVVTGVSGSGKSSLAFDTIYAEGYRQYLDSLSAHV 64 Query: 62 RQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCP 121 R+ L + KP VD + GLSP ++IEQ++ S NPRS VGTITEI D LRLLFAR G C Sbjct: 65 RRRLPKVSKPTVDWVSGLSPTVAIEQRTISRNPRSNVGTITEISDRLRLLFARTGRHDCR 124 Query: 122 DHDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARIDG 181 + + + + + L+A + E +R Sbjct: 125 KCGTEVTPLDTAAHLAALAEAATEGPVRLVATEPDGGETEV------------LRLEAAP 172 Query: 182 EVCDLSDPPKL---ELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVADMD 238 + L+D L EL+ + + V+ DR VR Sbjct: 173 DADTLADAGLLVERELRAERRLTVLRDRTPVRH--------------------------- 205 Query: 239 DPKAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNP 298 +A + CP CG + F+ N+PAG C C GLG D ++ + Sbjct: 206 --------LAAGWVCPYCGTEVHATSSDWFTPNSPAGMCDHCQGLGYTYRVDAALLVGDA 257 Query: 299 ELSLAGGAIRGWD-----RRNFYYFQMLKSLADHYKFDVEAPWGSLSANVHKVVLYGSGK 353 S+ GA+ + ++ ++ + L L ++ PW L V +L G Sbjct: 258 RESVRSGALTFYGDRRRGKKTWWPQRELPDLLAEAGASLDTPWEDLPTEVGDRIL-GDLT 316 Query: 354 ENIEFKYMNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGTR 413 E+I ER +K+ +S + F+ R C SC GTR Sbjct: 317 EHI-------------------------ERLFKDADSPERKSFYQGFMVQRQCGSCGGTR 351 Query: 414 LRREARHVYVENTPLPAISDMSIGHAMEFFNNLKL---AGQRAKIAEKILKEIGDRLKFL 470 EA V + + ++ ++I ++ ++ A+++ ++L ++ R++FL Sbjct: 352 HAAEALAVRLAGRNIAEVNGLAISRLRDWVGEVRAELAGKFLAELSAELLDQVDARVEFL 411 Query: 471 VNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGT 530 + VGL+YL+L RSA TLS GE QR+RLA Q+G+GLVGV+YVLDEPSIGLH RDN RL+G Sbjct: 412 LEVGLHYLSLDRSAPTLSAGEGQRLRLARQLGSGLVGVVYVLDEPSIGLHARDNGRLIGM 471 Query: 531 LIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQ 590 L L + GNTV+VVEHD + + AAD+++D+GPGAG GG VVA GP ++A S T Sbjct: 472 LRRLAEAGNTVLVVEHDRETMEAADYLVDMGPGAGTRGGLVVAAGPTAEVIAHRTSATSA 531 Query: 591 YMSGKRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLI 650 Y+ +R + P+ ++ L+LTGAR NNL+ V LT+P+G+ TC+TGVSGSGKS+LI Sbjct: 532 YLRNERTVVSPRPERRRPDDRRLELTGARLNNLRGVDLTIPIGVLTCVTGVSGSGKSSLI 591 Query: 651 NDTLFPIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTP 710 TL P + P+ ++G EH +V + Q IG + RS PATY GVF Sbjct: 592 TRTLQPAVDTAVRWRRTP-VGPFDRLRGAEHVRRVTTVTQDSIGGSSRSTPATYLGVFDE 650 Query: 711 VRELFAGVPESRARGYTPGRFSFNVR-GGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGK 769 +R+LFA E+ R Y+ FSFN GGRC+ C G GV++VEM FL D+ V C C G Sbjct: 651 IRKLFARTDEAVRRRYSTAMFSFNTEAGGRCDRCAGKGVVRVEMLFLADVSVRCPSCDGL 710 Query: 770 RYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATT 829 RY+ LEI ++G+TI E L + + EA E + VPA+A L+TL VGL Y+RLGQ T Sbjct: 711 RYSARVLEITHRGRTIAETLALEVGEAIELYADVPAIAYPLRTLSQVGLGYLRLGQDTGT 770 Query: 830 LSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIE 889 LSGGEAQR+KL+REL +R G TLY++DEPTTGLHF+D+Q LLDVLH L D+GNT+VVIE Sbjct: 771 LSGGEAQRLKLSRELLRRDEGGTLYLIDEPTTGLHFSDVQVLLDVLHDLVDRGNTVVVIE 830 Query: 890 HNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLKPML 940 H+++ +DWIVDLGP GG GG ++ +G PE +A S A +L L Sbjct: 831 HSVEFAAASDWIVDLGPGGGEDGGRLVAAGPPELLATHPDSAIAPYLARQL 881 Score = 150 bits (378), Expect = 3e-34, Method: Composition-based stats. Identities = 73/285 (25%), Positives = 121/285 (42%), Gaps = 45/285 (15%) Query: 353 KENIEFKYMNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFI----------- 401 + + G + + GV + + + T+ AVR + + Sbjct: 623 RRVTTVTQDSIGGSSRSTPATYLGVFDEIRKLFARTD-EAVRRRYSTAMFSFNTEAGGRC 681 Query: 402 ------------------SNRPCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFF 443 + C SC+G R + + + +G A+E + Sbjct: 682 DRCAGKGVVRVEMLFLADVSVRCPSCDGLRYSARVLEITHRGRTIAETLALEVGEAIELY 741 Query: 444 NNLKLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGA 503 ++ I L+ L VGL YL L + TLSGGEAQR++L+ ++ Sbjct: 742 ADVP--------------AIAYPLRTLSQVGLGYLRLGQDTGTLSGGEAQRLKLSRELLR 787 Query: 504 GLVG-VMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGP 562 G +Y++DEP+ GLH D + LL L L D GNTV+V+EH + A+D ++D+GP Sbjct: 788 RDEGGTLYLIDEPTTGLHFSDVQVLLDVLHDLVDRGNTVVVIEHSVEFAAASDWIVDLGP 847 Query: 563 GAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEVPKKRVPA 607 G G GG +VA GP E + P+S Y++ + + ++ P Sbjct: 848 GGGEDGGRLVAAGPPELLATHPDSAIAPYLARQLALTAARRPNPE 892 >UniRef50_B6W740 Putative uncharacterized protein n=1 Tax=Anaerococcus hydrogenalis DSM 7454 RepID=B6W740_9FIRM Length = 610 Score = 724 bits (1870), Expect = 0.0, Method: Composition-based stats. Identities = 305/605 (50%), Positives = 423/605 (69%), Gaps = 6/605 (0%) Query: 2 DKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYA 61 +KI ++GART+NLKN++L +PRDK+IV TGLSGSGKS+LAFDT+YAEGQRRYVESLS+YA Sbjct: 4 NKIVIKGARTNNLKNVDLTLPRDKMIVFTGLSGSGKSTLAFDTIYAEGQRRYVESLSSYA 63 Query: 62 RQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCP 121 RQFL ++K DVD IEGLSP+ISI+QK+T+ NPRSTV T+TEI+DY RLLFAR+G+ CP Sbjct: 64 RQFLGNLDKADVDAIEGLSPSISIDQKTTNRNPRSTVATVTEIYDYYRLLFARIGDAYCP 123 Query: 122 DHDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARIDG 181 + AQ++ QMVD +L R+ +LAP+++ +KG+H K L+N+ GY+R IDG Sbjct: 124 VCGKKIEAQSIDQMVDRILKLENKTRIQILAPVVRAQKGQHKKKLQNIQKMGYVRVMIDG 183 Query: 182 EVCDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVADMDDPK 241 E D+ + +L KKH I ++VDR +++ + RLA+S ETALEL+ G + +D Sbjct: 184 ERYDIEEEIELSKTKKHDISIIVDRIVIKEGINSRLADSLETALELTDGLVQINVID--- 240 Query: 242 AEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPELS 301 E+ + S+ ACP S+ E+ P +FSFN P G CP C+GLG DPD VI + LS Sbjct: 241 GEDFILSSKLACPDGHVSLPEITPNMFSFNAPQGMCPECNGLGFHLQIDPDLVIPDKNLS 300 Query: 302 LAGGAIRGWDR--RNFYYFQMLKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKENIEFK 359 + GAI + + YY +M+K++A ++KF ++ P + + +LYG+ KE + F Sbjct: 301 INEGAIDPYATSGKGTYYNEMIKAIAKNHKFSLDEPIKNAPKKMIDEILYGTKKE-VSFT 359 Query: 360 YMNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGTRLRREAR 419 + + FEG + N+ RY+ T S A ++ + F+S C SC G RL+ E Sbjct: 360 FDSHFSGRKNYTGHFEGAIKNLSDRYERTNSDAQKKRMRGFMSEEECKSCHGHRLKDEIL 419 Query: 420 HVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLT 479 + V+ + I++MS+ +EFF+NLKL+ + KIAE I+KEI R+KFL +VGL YL+ Sbjct: 420 AIKVDGKSISEIANMSVDKTIEFFDNLKLSPMKEKIAELIIKEIKARVKFLQDVGLGYLS 479 Query: 480 LSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGN 539 LSRSA TLSGGE+QRIRLA+QIG+GLVGV YVLDEPSIGLHQRDN++L+ +L +L D+GN Sbjct: 480 LSRSASTLSGGESQRIRLATQIGSGLVGVCYVLDEPSIGLHQRDNDKLIKSLRNLTDIGN 539 Query: 540 TVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIE 599 T+I+VEHDED ++AAD+++DIGP AGVHGGE+VA+G L I +S+TG Y+SGK K + Sbjct: 540 TLIIVEHDEDTMKAADYLVDIGPKAGVHGGEIVAKGSLSDIKNCKKSITGAYLSGKEKFQ 599 Query: 600 VPKKR 604 KK Sbjct: 600 YQKKE 604 Score = 174 bits (440), Expect = 2e-41, Method: Composition-based stats. Identities = 74/197 (37%), Positives = 115/197 (58%), Gaps = 17/197 (8%) Query: 754 HFLPDIYVPCDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDA----------- 802 F+ + C C G R E L IK GK+I E+ +M++++ EFFD Sbjct: 399 GFMSEEE--CKSCHGHRLKDEILAIKVDGKSISEIANMSVDKTIEFFDNLKLSPMKEKIA 456 Query: 803 ---VPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEP 859 + + +++ L DVGL Y+ L +SA+TLSGGE+QR++LA ++ G Y+LDEP Sbjct: 457 ELIIKEIKARVKFLQDVGLGYLSLSRSASTLSGGESQRIRLATQIGSGLVG-VCYVLDEP 515 Query: 860 TTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSG 919 + GLH D +L+ L L D GNT++++EH+ D +K AD++VD+GP+ G GGEI+ G Sbjct: 516 SIGLHQRDNDKLIKSLRNLTDIGNTLIIVEHDEDTMKAADYLVDIGPKAGVHGGEIVAKG 575 Query: 920 TPETVAECEASHTARFL 936 + + C+ S T +L Sbjct: 576 SLSDIKNCKKSITGAYL 592 Score = 86.6 bits (213), Expect = 5e-15, Method: Composition-based stats. Identities = 42/113 (37%), Positives = 57/113 (50%), Gaps = 6/113 (5%) Query: 615 LTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAEPAPYR 674 + GAR NNLK+V LTLP TG+SGSGKSTL DT++ QR+ + + + Sbjct: 8 IKGARTNNLKNVDLTLPRDKMIVFTGLSGSGKSTLAFDTIYAEGQRRYVESLSSYARQFL 67 Query: 675 DIQGLEHFDKV------IDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPES 721 D + I IDQ R PRS AT T ++ R LFA + ++ Sbjct: 68 GNLDKADVDAIEGLSPSISIDQKTTNRNPRSTVATVTEIYDYYRLLFARIGDA 120 >UniRef50_Q0W0L7 Excinuclease ABC, ATPase subunit n=3 Tax=cellular organisms RepID=Q0W0L7_UNCMA Length = 843 Score = 723 bits (1867), Expect = 0.0, Method: Composition-based stats. Identities = 334/709 (47%), Positives = 455/709 (64%), Gaps = 9/709 (1%) Query: 238 DDPKAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQN 297 D + F CP CG + EL FSFN P GAC TC GL V + R+I + Sbjct: 135 DWQDESDESADETFPCPGCGRELPELSMAHFSFNKPEGACTTCTGLSVVRQAIVSRLI-D 193 Query: 298 PELSLAGGAIRGW-DRRNFYYFQMLKSLADHYKF--DVEAPWGSLSANVHKVVLYGSGKE 354 S+ A+ GW D N Q+L++ +Y F D+ P + ++LYG+ Sbjct: 194 ENRSIPENAVYGWTDFHNNRNGQILQAAGRYYGFTFDITKPVKDYTPVERDLLLYGTDSP 253 Query: 355 NIEFKYMNDRGDTSIRRHPFEGVLHNMERRYKETESSA-VREELAKFISNRPCASCEGTR 413 + + + ++ + FEGV+ + RRY E S A RE+L + + C CEGTR Sbjct: 254 QFKRHFPGIKPPSTSAKGRFEGVITTLMRRYDEHASDAAYREKLDDLFTTQTCTDCEGTR 313 Query: 414 LRREARHVYVENTPLPAISDMSIGHAMEFFNNLK--LAGQRAKIAEKILKEIGDRLKFLV 471 LR E+R V V + A+S +S+ + +L L Q A IL ++ +R++ L+ Sbjct: 314 LRPESRAVTVAGLSIDAVSRLSLKDLDAWLQSLPQQLTDQEMLFARPILDDLQERIRRLI 373 Query: 472 NVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTL 531 VG+ YLTL RS T+S GEA+R+RLA+ +G+GL G++YVLDEP+IGLHQRD RL+ L Sbjct: 374 EVGVGYLTLERSTPTISAGEARRLRLAALLGSGLTGMLYVLDEPTIGLHQRDTGRLISVL 433 Query: 532 IHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQY 591 LRDLGNTV+VVEHD + I+AAD++IDIGPGAG +GG++VA G + SLTG + Sbjct: 434 RRLRDLGNTVLVVEHDLELIKAADYLIDIGPGAGKYGGQIVAAGTPAEVAQTEGSLTGAF 493 Query: 592 MSGKRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLIN 651 ++G + VP+ R ++ + GAR NL ++T+ +P+GL +TGVSGSGKS+LI Sbjct: 494 IAGTMTVPVPETRRKRGQSALM-IKGARHFNLNNLTIEIPLGLLVAVTGVSGSGKSSLIF 552 Query: 652 DTLFPIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPV 711 L A ++LNG + +P + I G E+ DKVI IDQS I R PRSN ATY+ FTP+ Sbjct: 553 KILATAAHQRLNGTS-EKPGDHDSITGWEYIDKVITIDQSQILRIPRSNAATYSDAFTPI 611 Query: 712 RELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRY 771 RE FA P+ + T +FSFNV GGRCE CQG G + V+MHFLP++ V C C+G+R+ Sbjct: 612 REAFAATPDGKKNKATARQFSFNVPGGRCERCQGAGTLAVKMHFLPEVEVRCPACRGRRF 671 Query: 772 NRETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLS 831 RETL IKY+G I +VL+MT+EEA E F VPA+A +LQ + DVGL Y++LGQ ATTLS Sbjct: 672 KRETLAIKYRGYDISQVLEMTVEEALELFSDVPAIASRLQFMSDVGLGYLKLGQPATTLS 731 Query: 832 GGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHN 891 GGEAQR+KLAREL + TG+TLY+LDEPTTGLH AD +LL VL +L D GN+++VIEHN Sbjct: 732 GGEAQRLKLARELGRSSTGRTLYLLDEPTTGLHPADTARLLQVLQRLVDAGNSLIVIEHN 791 Query: 892 LDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLKPML 940 LD++K ADW++DLGPEGG+ GG ++ GTP VAE E S+T ++LK L Sbjct: 792 LDLVKAADWVIDLGPEGGAEGGRLVAEGTPGEVAEVEESYTGQYLKTRL 840 Score = 200 bits (510), Expect = 2e-49, Method: Composition-based stats. Identities = 78/196 (39%), Positives = 113/196 (57%), Gaps = 15/196 (7%) Query: 403 NRPCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKE 462 C +C G R +RE + + + +M++ A+E F+++ Sbjct: 660 EVRCPACRGRRFKRETLAIKYRGYDISQVLEMTVEEALELFSDVP--------------A 705 Query: 463 IGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGV-MYVLDEPSIGLHQ 521 I RL+F+ +VGL YL L + A TLSGGEAQR++LA ++G G +Y+LDEP+ GLH Sbjct: 706 IASRLQFMSDVGLGYLKLGQPATTLSGGEAQRLKLARELGRSSTGRTLYLLDEPTTGLHP 765 Query: 522 RDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIM 581 D RLL L L D GN++IV+EH+ D ++AAD VID+GP G GG +VAEG + Sbjct: 766 ADTARLLQVLQRLVDAGNSLIVIEHNLDLVKAADWVIDLGPEGGAEGGRLVAEGTPGEVA 825 Query: 582 AVPESLTGQYMSGKRK 597 V ES TGQY+ + + Sbjct: 826 EVEESYTGQYLKTRLQ 841 Score = 170 bits (431), Expect = 2e-40, Method: Composition-based stats. Identities = 67/130 (51%), Positives = 91/130 (70%), Gaps = 8/130 (6%) Query: 3 KIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLS--AY 60 IE+R AR HNLKN+NL IP++K++V+TGLSGSGKS++A D L EGQR+Y+ESL + Sbjct: 4 TIEIRNARLHNLKNVNLDIPKNKIVVITGLSGSGKSTIAMDILLKEGQRQYMESLGMITF 63 Query: 61 ARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRC 120 R +P VD I GLSP IS++Q +H+PRSTVGT+T+I YLR+L+AR+G C Sbjct: 64 GRT------RPPVDSIVGLSPTISVDQYLLNHSPRSTVGTVTDIFTYLRVLYARIGHRNC 117 Query: 121 PDHDVPLAAQ 130 P + + Sbjct: 118 PHCGMEVPPM 127 Score = 88.1 bits (217), Expect = 1e-15, Method: Composition-based stats. Identities = 40/112 (35%), Positives = 53/112 (47%), Gaps = 15/112 (13%) Query: 6 VRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQFL 65 ++GAR NL N+ + IP L+ VTG+SGSGKSSL F L +R Sbjct: 516 IKGARHFNLNNLTIEIPLGLLVAVTGVSGSGKSSLIFKILATAAHQRLN----------- 564 Query: 66 SLMEKP-DVDHIEG---LSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFA 113 EKP D D I G + I+I+Q PRS T ++ +R FA Sbjct: 565 GTSEKPGDHDSITGWEYIDKVITIDQSQILRIPRSNAATYSDAFTPIREAFA 616 Score = 80.8 bits (198), Expect = 3e-13, Method: Composition-based stats. Identities = 46/184 (25%), Positives = 67/184 (36%), Gaps = 42/184 (22%) Query: 609 PEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGA--T 666 +++ AR +NLK+V L +P ITG+SGSGKST+ D L QRQ + Sbjct: 1 MHSTIEIRNARLHNLKNVNLDIPKNKIVVITGLSGSGKSTIAMDILLKEGQRQYMESLGM 60 Query: 667 IAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPE------ 720 I + + I +DQ + +PRS T T +FT +R L+A + Sbjct: 61 ITFGRTRPPVDSIVGLSPTISVDQYLLNHSPRSTVGTVTDIFTYLRVLYARIGHRNCPHC 120 Query: 721 ----------------------------------SRARGYTPGRFSFNVRGGRCEACQGD 746 + FSFN G C C G Sbjct: 121 GMEVPPMGFESQAYDWQDESDESADETFPCPGCGRELPELSMAHFSFNKPEGACTTCTGL 180 Query: 747 GVIK 750 V++ Sbjct: 181 SVVR 184 >UniRef50_B2T6A1 Excinuclease ABC, A subunit n=34 Tax=Bacteria RepID=B2T6A1_BURPP Length = 950 Score = 699 bits (1805), Expect = 0.0, Method: Composition-based stats. Identities = 279/797 (35%), Positives = 401/797 (50%), Gaps = 87/797 (10%) Query: 224 ALELSGG----TAVVADMDDPKAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPT 279 AL+ G + V + + + + L FS N GACPT Sbjct: 159 ALQQQRGTPSARSSVGSVTTLSSLVRMLYSRTG--DYPPKQPMLFAEDFSPNTVQGACPT 216 Query: 280 CDGLGVQQYFDPDRVIQNPELSLAGGAIRGWDRRNFYYFQMLKSLADHYKFDVEAPWGSL 339 C GLG ++ + L++ AI W ++ Q L+ + +DV+ PW L Sbjct: 217 CHGLGRVYEVTEKSMVPDDSLTIRERAIAAWPP--AWHGQNLRDILVTLGYDVDKPWRDL 274 Query: 340 SANVHKVVLYGSGKENIEF---------KYMNDRGDTSIRRHPFEGVLHNMERRYKETES 390 +L+ + + + R D + F G + + T+S Sbjct: 275 PKKDRDWILFTDEQPTVPVYAGLTPKETRAALRRKDEPSYQGTFTGARRYVLHTFANTQS 334 Query: 391 SAVREELAKFISNRPCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNL---- 446 + +++ +++F+ C +C G RL++EA V + + + + E + Sbjct: 335 ALMKKRVSRFMIGSVCPTCHGKRLKKEALSVKFAGLDIGEFAQLPLARLAEMLAPIARGE 394 Query: 447 -------------------------------------------------KLAGQRAKIAE 457 L+ ++ A+ Sbjct: 395 WPEPDVGHSGKDPGKGSVLSKNAMRDAVDKRVAAGGSAHKAAPDVRRTPNLSEEKRVAAQ 454 Query: 458 KILKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSI 517 +I E+ +RL LV++GL YL L RS TLS GE QR+RLA+Q+ + L GV+YVLDEPS Sbjct: 455 RIAAELLERLTTLVDLGLGYLALERSTPTLSSGELQRLRLATQLSSQLFGVVYVLDEPSA 514 Query: 518 GLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPL 577 GLH D E L L L+ GN++ VVEHD +R AD ++D+GP AG GG VV GP Sbjct: 515 GLHPADGEALFSALQSLKAAGNSLFVVEHDLQMMRRADWLVDVGPAAGEAGGHVVYSGPP 574 Query: 578 EAIMAVPESLTGQYMSGKRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTC 637 + V S T +++ P R P L+L G NNL + P+G T Sbjct: 575 AGLAKVEASHTRRHLFAP---PAPVARATREPAGWLRLAGITRNNLHGLDAAFPLGCLTA 631 Query: 638 ITGVSGSGKSTLINDTLFPIAQRQLNG--------------ATIAEPAPYRDIQGLEHFD 683 +TGVSGSGKS+L++ L + L AT + P R +G++ Sbjct: 632 VTGVSGSGKSSLVSQALPELVASHLGRVFENPDDDEQDPLLATASAPTSGRIAEGMDALR 691 Query: 684 KVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESRARGYTPGRFSFNVRGGRCEAC 743 +++ +DQ PIGRTPRSN ATYTG+F VR+LFA P +R R Y GRFSFNV GRC C Sbjct: 692 RLVRVDQKPIGRTPRSNLATYTGLFDHVRKLFADTPLARKRRYGAGRFSFNVAQGRCPTC 751 Query: 744 QGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAV 803 +G+G + VE+ FLP +Y PC C G RYN +TLE+ ++ K I EVL +T++ A +FF Sbjct: 752 EGEGFVSVELLFLPSVYAPCSTCHGTRYNTQTLEVTWRDKNIAEVLGLTVDAACDFFADE 811 Query: 804 PALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGL 863 ++ R L+ L D+GL Y+RLGQ AT LSGGEAQR+KLA EL + G TLYILDEPTTGL Sbjct: 812 ASVMRALKVLRDIGLGYLRLGQPATELSGGEAQRIKLATELQRAQRGDTLYILDEPTTGL 871 Query: 864 HFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPET 923 H AD+ +L+ L L D GNT+VV+EH++ V +DW+VD+GP G GG+I+ SGTP Sbjct: 872 HPADVDRLMVQLQGLVDAGNTVVVVEHDMRVASQSDWVVDVGPGAGDAGGKIVASGTPAE 931 Query: 924 VAECEASHTARFLKPML 940 + + S TA +L+ L Sbjct: 932 ILRVKESRTAEYLRQHL 948 Score = 176 bits (446), Expect = 4e-42, Method: Composition-based stats. Identities = 78/281 (27%), Positives = 127/281 (45%), Gaps = 32/281 (11%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 63 + VRGAR HNLKNI++ IPRD L+V TG+SGSGKSSLAF TLYAE QRRY ES++ YAR+ Sbjct: 79 VRVRGAREHNLKNIDVQIPRDALVVFTGVSGSGKSSLAFGTLYAEAQRRYFESVAPYARR 138 Query: 64 FLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVG------- 116 + + P+VD IEGL PA++++Q+ + + RS+VG++T + +R+L++R G Sbjct: 139 LIEQVGVPEVDAIEGLPPAVALQQQRGTPSARSSVGSVTTLSSLVRMLYSRTGDYPPKQP 198 Query: 117 ------------EPRCPDHDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTK 164 + CP ++ + + + + A Sbjct: 199 MLFAEDFSPNTVQGACPTCHGLGRVY---EVTEKSMVPDDSLTIRERAIAAWPPAWHGQN 255 Query: 165 TLENLASQGYIRARIDGEVCDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETA 224 + L + GY + ++ L ++ T+ V + L E + Sbjct: 256 LRDILVTLGYDVDKPWRDLPKKDRDWILFTDEQPTVPVYAG--LTPKETRAALRRKDEPS 313 Query: 225 LEL---SGGTAVVADMDDPKAEEL-----LFSANFACPICG 257 + V+ + ++ + F CP C Sbjct: 314 YQGTFTGARRYVLHTFANTQSALMKKRVSRFMIGSVCPTCH 354 Score = 92.7 bits (229), Expect = 5e-17, Method: Composition-based stats. Identities = 44/205 (21%), Positives = 81/205 (39%), Gaps = 15/205 (7%) Query: 595 KRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTL 654 + +++ GAR +NLK++ + +P TGVSGSGKS+L TL Sbjct: 61 RNNAPSTPPSDAPAFTGFVRVRGAREHNLKNIDVQIPRDALVVFTGVSGSGKSSLAFGTL 120 Query: 655 FPIAQRQLNGATIAEPAPYRDIQGLEHFDKV------IDIDQSPIGRTPRSNPATYTGVF 708 + AQR+ + + G+ D + + + Q + RS+ + T + Sbjct: 121 YAEAQRRYFESVAPYARRLIEQVGVPEVDAIEGLPPAVALQQQRGTPSARSSVGSVTTLS 180 Query: 709 TPVRELFAGVPE--SRARGYTPGRFSFNVRGGRCEACQGDGVIK--VEMHFLPDIYVPCD 764 + VR L++ + + FS N G C C G G + E +PD + Sbjct: 181 SLVRMLYSRTGDYPPKQPMLFAEDFSPNTVQGACPTCHGLGRVYEVTEKSMVPDDSLTIR 240 Query: 765 QCKGKRYNRETLEIKYKGKTIHEVL 789 + + + G+ + ++L Sbjct: 241 ERAIAAWPP-----AWHGQNLRDIL 260 Score = 81.2 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 39/148 (26%), Positives = 58/148 (39%), Gaps = 25/148 (16%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTL----YAEGQRRYVESLSA 59 + + G +NL ++ P L VTG+SGSGKSSL L + R + Sbjct: 607 LRLAGITRNNLHGLDAAFPLGCLTAVTGVSGSGKSSLVSQALPELVASHLGRVFENPDDD 666 Query: 60 YARQFLSLMEKPDVDHI-EGLSP---AISIEQKSTSHNPRSTVGTITEIHDYLRLLFA-- 113 L+ P I EG+ + ++QK PRS + T T + D++R LFA Sbjct: 667 EQDPLLATASAPTSGRIAEGMDALRRLVRVDQKPIGRTPRSNLATYTGLFDHVRKLFADT 726 Query: 114 ---------------RVGEPRCPDHDVP 126 V + RCP + Sbjct: 727 PLARKRRYGAGRFSFNVAQGRCPTCEGE 754 >UniRef50_A1SWH0 Excinuclease ABC, A subunit n=15 Tax=Bacteria RepID=A1SWH0_PSYIN Length = 851 Score = 699 bits (1804), Expect = 0.0, Method: Composition-based stats. Identities = 314/866 (36%), Positives = 455/866 (52%), Gaps = 73/866 (8%) Query: 100 TITEIHDYLRLLFARVGEPRCPDHDVPLAAQTVSQMVDNVLSQPEGKRLM----LLAPII 155 + T ++ ++R+ AR + D D+P +V GK + + A Sbjct: 28 SHTTLNSFVRVRGARENNLQNVDVDLP-----RDAIVAFTGVSGSGKSSLAFGTIFAEAQ 82 Query: 156 KERKGEHTKTLENLASQGYIRARIDGEVCDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQ 215 + L QG+ R+D E+ L PP + LQ++ R + Sbjct: 83 RRFFESVAPYARRLIQQGHTP-RVD-EITGL--PPAVALQQR------------RGTPSS 126 Query: 216 RLAESFETALELSGGTAVVADMDDPKAEELLFSANFACPICGYSMRELEPRLFSFNNPAG 275 R + V + + + G LE FS N G Sbjct: 127 R---------------SSVGTVTTLSNSLRMLYSRTGLYPDGA--PRLESDSFSPNTAMG 169 Query: 276 ACPTCDGLGVQQYFDPDRVIQNPELSLAGGAIRGWDRRNFYYFQMLKSLADHYKFDVEAP 335 ACPTC GLG ++ +P LS++ GAI W + + L+ + +DV+ Sbjct: 170 ACPTCQGLGTAHTVTEASLVLDPSLSISEGAITAW--PGAWQGKNLRDILSVLGYDVDTA 227 Query: 336 WGSLSANVHKVVLYGSGKENIEFKYMNDRGDTSIRRHPFEGVLHNMERRYKETESSAVRE 395 W LS +L+ + +E + +R + F + +++S++VR+ Sbjct: 228 WNQLSRTDRDWILFTEEQPVVEIMPVRERP--RPYKGKFWSAKSYVMHTLADSKSASVRK 285 Query: 396 ELAKFISNRPCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKI 455 + K++ + PC C G+ LR EA V + ++ + + F+ L +A Sbjct: 286 RVLKYVKSGPCLICAGSGLRSEALAVTFNGHTIADLNALPLTELRHAFDYLGVANT---A 342 Query: 456 AEKILKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEP 515 ++ I ++ RL L+++GL YL+L R+ TLS GE QR+R+A+Q+ AGL GV+YVLDEP Sbjct: 343 SDTITSDLTRRLDVLLDLGLGYLSLGRATPTLSPGEMQRLRIATQLRAGLFGVIYVLDEP 402 Query: 516 SIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEG 575 S GLH D E LL L L+ GN+V VVEH+ D +R AD VID+GP AG HGG+V+ G Sbjct: 403 SAGLHPADAEPLLAVLEELKSSGNSVFVVEHNMDVVRRADWVIDVGPLAGEHGGKVLYSG 462 Query: 576 PLEAIMAVPESLTGQYMSGKRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLF 635 P + VP S+T +++ + +P R +P L LTG +NL+ + P+G+ Sbjct: 463 PTAGLADVPASITREFLFANER-PIPATRALRDPIGWLGLTGITRHNLRGIDAEFPLGVL 521 Query: 636 TCITGVSGSGKSTLINDTLFPIAQRQLNGATIAEPAP----------------------- 672 T +TGVSGSGKSTL++ L L+ Sbjct: 522 TAVTGVSGSGKSTLVSQVLAEAVGLHLHPDEDPIAGTASTGSATGEKDDQSEPKPVEITT 581 Query: 673 YRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESRARGYTPGRFS 732 + I G E ++++ +DQ PIGRTPRSN ATYTG+F VR FA +PE+R+R ++P RFS Sbjct: 582 VKAITGAEPINRLVRVDQKPIGRTPRSNLATYTGLFDAVRTTFAAIPEARSRKFSPSRFS 641 Query: 733 FNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKYKGKTIHEVLDMT 792 FNV GGRCE C G+G + V + FLP Y PC C G RYN ETLE+ Y+ K I EVL++T Sbjct: 642 FNVPGGRCETCLGEGFVAVGLLFLPGSYSPCPDCGGSRYNPETLEVTYRNKNIAEVLELT 701 Query: 793 IEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQT 852 ++ A F VP+ R L+TL +VGL Y+RLGQ AT LSGGEAQR+KLA EL + G T Sbjct: 702 VDAAVVFLADVPSALRSLETLSEVGLGYLRLGQPATELSGGEAQRIKLATELQRARRGHT 761 Query: 853 LYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADWIVDLGPEGGSGG 912 LY+LDEPTTGLH AD+ LL L++L D GNT++V+EH++DV+ ADW++D+GP GG G Sbjct: 762 LYVLDEPTTGLHPADVLLLLTQLNRLVDAGNTVIVVEHDMDVVSAADWVIDIGPAGGDKG 821 Query: 913 GEILVSGTPETVAECEASHTARFLKP 938 G I+ +GTP TVA AS TA +L Sbjct: 822 GHIVAAGTPHTVAVHPASRTAPYLAR 847 Score = 174 bits (440), Expect = 2e-41, Method: Composition-based stats. Identities = 68/193 (35%), Positives = 106/193 (54%), Gaps = 28/193 (14%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 63 + VRGAR +NL+N+++ +PRD ++ TG+SGSGKSSLAF T++AE QRR+ ES++ YAR+ Sbjct: 36 VRVRGARENNLQNVDVDLPRDAIVAFTGVSGSGKSSLAFGTIFAEAQRRFFESVAPYARR 95 Query: 64 FLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVG------- 116 + P VD I GL PA++++Q+ + + RS+VGT+T + + LR+L++R G Sbjct: 96 LIQQGHTPRVDEITGLPPAVALQQRRGTPSSRSSVGTVTTLSNSLRMLYSRTGLYPDGAP 155 Query: 117 ------------EPRCPDHDVPLAAQTVSQ---MVDNVLSQPEGKRLMLLAPIIKERKGE 161 CP A TV++ ++D LS EG A + Sbjct: 156 RLESDSFSPNTAMGACPTCQGLGTAHTVTEASLVLDPSLSISEG------AITAWPGAWQ 209 Query: 162 HTKTLENLASQGY 174 + L+ GY Sbjct: 210 GKNLRDILSVLGY 222 Score = 87.7 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 44/164 (26%), Positives = 64/164 (39%), Gaps = 8/164 (4%) Query: 596 RKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLF 655 R I +++ GAR NNL++V + LP TGVSGSGKS+L T+F Sbjct: 19 RHIPDSASVSHTTLNSFVRVRGARENNLQNVDVDLPRDAIVAFTGVSGSGKSSLAFGTIF 78 Query: 656 PIAQRQLNGATIAEPAPYRDIQGLEHFDKV------IDIDQSPIGRTPRSNPATYTGVFT 709 AQR+ + D++ + + Q + RS+ T T + Sbjct: 79 AEAQRRFFESVAPYARRLIQQGHTPRVDEITGLPPAVALQQRRGTPSSRSSVGTVTTLSN 138 Query: 710 PVRELFAGVPE--SRARGYTPGRFSFNVRGGRCEACQGDGVIKV 751 +R L++ A FS N G C CQG G Sbjct: 139 SLRMLYSRTGLYPDGAPRLESDSFSPNTAMGACPTCQGLGTAHT 182 Score = 84.7 bits (208), Expect = 2e-14, Method: Composition-based stats. Identities = 53/280 (18%), Positives = 94/280 (33%), Gaps = 35/280 (12%) Query: 6 VRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYA---------EGQRRYVES 56 + G HNL+ I+ P L VTG+SGSGKS+L L E S Sbjct: 501 LTGITRHNLRGIDAEFPLGVLTAVTGVSGSGKSTLVSQVLAEAVGLHLHPDEDPIAGTAS 560 Query: 57 LSAYARQFLSLMEKPDVD-----HIEGLSPA---ISIEQKSTSHNPRSTVGTITEIHDYL 108 + + E V+ I G P + ++QK PRS + T T + D + Sbjct: 561 TGSATGEKDDQSEPKPVEITTVKAITGAEPINRLVRVDQKPIGRTPRSNLATYTGLFDAV 620 Query: 109 RLLFARVGEPRCPDHDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLEN 168 R FA + E R ++ + G+ + + + Sbjct: 621 RTTFAAIPEARSRKFS---PSRFSFNVPGGRCETCLGEGFVAVGLLFLPGSYSPCPDCGG 677 Query: 169 LASQGYIRARIDGEVCDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELS 228 +R + E +++ +E+ VD V S ET E+ Sbjct: 678 --------SRYNPETLEVT---YRNKNIAEVLELTVDAAVVFLADVPSALRSLETLSEVG 726 Query: 229 GGTAVVA----DMDDPKAEELLFSANFACPICGYSMRELE 264 G + ++ +A+ + + G+++ L+ Sbjct: 727 LGYLRLGQPATELSGGEAQRIKLATELQRARRGHTLYVLD 766 >UniRef50_B4V5Y5 Excinuclease ABC subunit A n=1 Tax=Streptomyces sp. Mg1 RepID=B4V5Y5_9ACTO Length = 791 Score = 699 bits (1803), Expect = 0.0, Method: Composition-based stats. Identities = 288/713 (40%), Positives = 411/713 (57%), Gaps = 22/713 (3%) Query: 229 GGTAVVADMDDPKAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQY 288 G + V + + + G L+ FS N AGACP+C G+G Sbjct: 98 GSRSSVGTVTLLSNSLRMLYSRAGAYPAGA--ERLDSDAFSPNTAAGACPSCHGIGRIHR 155 Query: 289 FDPDRVIQNPELSLAGGAIRGWDRRNFYYFQMLKSLADHYKFDVEAPWGSLSANVHKVVL 348 D ++ +P+LS+ GAI W + + L+ + + DV+APW L A + +L Sbjct: 156 TDEQLLVPDPDLSIRQGAIAAW--PGAWQGKNLRDILEALGHDVDAPWRELPARDREWIL 213 Query: 349 YGSGKENIEFKYMNDRGD-TSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCA 407 + + + + + + + ++ R + +++S+++R KF+++ PC Sbjct: 214 FTEEQPVVTVHPVREAERIQRPYQGTYMSAHRHVMRTFADSKSASLRARAEKFLTDSPCP 273 Query: 408 SCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDRL 467 CEG RLR EA V + ++ + + + A + A + +++ R+ Sbjct: 274 VCEGRRLRPEALAVTFAGRTIAELAAVPLTELDGVLAS---APPGGEAARVLAEDLRARI 330 Query: 468 KFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERL 527 + +GL YL+L R+A +LS GE QR+RLA+Q+ +GL GV+YVLDEPS GLH D E L Sbjct: 331 APVTELGLGYLSLDRTAPSLSAGELQRLRLATQLKSGLFGVVYVLDEPSAGLHPADTEAL 390 Query: 528 LGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESL 587 L L L+ GNTV VVEHD D +R AD ++D+GP AG HGG V+ GP + V ES Sbjct: 391 LTVLDRLKAAGNTVFVVEHDLDVVRHADWLVDVGPLAGEHGGRVLHSGPPAGLADVAESA 450 Query: 588 TGQYMSGKRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKS 647 T +++ + + R ++L+G +NL+ VT P+G+FT +TGVSGSGKS Sbjct: 451 TARHLFASLESPE-RPRPVREARGAVRLSGVDRHNLRGVTAEFPLGVFTAVTGVSGSGKS 509 Query: 648 TLINDTLFPIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGV 707 TL+ L +L +++++DQ PIGRTPRSN ATYTG+ Sbjct: 510 TLVGQALAGEVAGRLAEPGFP-------------VRRLVEVDQRPIGRTPRSNLATYTGL 556 Query: 708 FTPVRELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCK 767 F VR LF E+RARG+ GRFSFNV GGRCE CQG+G + VE+ FLP Y PC QC Sbjct: 557 FDVVRRLFTASDEARARGWKAGRFSFNVPGGRCETCQGEGFVSVELLFLPSTYAPCPQCG 616 Query: 768 GKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSA 827 G RYN ETL+++Y+G +I EVL +T+E A FF VPA AR L+ L D+GL Y+RLGQ A Sbjct: 617 GARYNAETLQVRYEGLSIAEVLSLTVEAAAVFFAQVPAAARSLRALEDIGLGYLRLGQPA 676 Query: 828 TTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVV 887 T LSGGEAQR+KLA EL + TLY+LDEPTTGLH AD++ LL LH L + G+++VV Sbjct: 677 TELSGGEAQRIKLATELQRLRRDHTLYLLDEPTTGLHPADVRVLLRQLHGLVEAGHSVVV 736 Query: 888 IEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLKPML 940 +EH++DV+ ADW++DLGP GG+ GG ++ SGTP VA S TA +L L Sbjct: 737 VEHDMDVVAGADWVIDLGPGGGAEGGRVVASGTPSEVARTPGSRTAGYLARAL 789 Score = 174 bits (441), Expect = 1e-41, Method: Composition-based stats. Identities = 80/294 (27%), Positives = 127/294 (43%), Gaps = 38/294 (12%) Query: 3 KIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYAR 62 + VRGAR HNL+ +++ IPRD L V TG+SGSGKSSLAF TLYAE QRRY ES++ YAR Sbjct: 8 YVRVRGAREHNLRGVDVDIPRDALTVFTGVSGSGKSSLAFGTLYAEAQRRYFESVAPYAR 67 Query: 63 QFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVG------ 116 + + + P VD + GL PA+S+EQ+ ++ RS+VGT+T + + LR+L++R G Sbjct: 68 RLIHQIGAPKVDSVTGLPPAVSLEQRRSTPGSRSSVGTVTLLSNSLRMLYSRAGAYPAGA 127 Query: 117 -------------EPRCPDHDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHT 163 CP + +L + A + Sbjct: 128 ERLDSDAFSPNTAAGACPSCHGIGRIHRTDE---QLLVPDPDLSIRQGAIAAWPGAWQGK 184 Query: 164 KTLENLASQGYIRARIDGEVCDLSDPPKLELQKKHTIEVVVDRFKV---RDDLTQRLAES 220 + L + G+ +D + +L + + I ++ V +R+ Sbjct: 185 NLRDILEALGHD---VD------APWRELPARDREWILFTEEQPVVTVHPVREAERIQRP 235 Query: 221 FETALELSGGTAVVADMDDPKAEEL----LFSANFACPICGYSMRELEPRLFSF 270 ++ + + D A F + CP+C E +F Sbjct: 236 YQGTYMSAHRHVMRTFADSKSASLRARAEKFLTDSPCPVCEGRRLRPEALAVTF 289 Score = 91.2 bits (225), Expect = 2e-16, Method: Composition-based stats. Identities = 53/212 (25%), Positives = 88/212 (41%), Gaps = 11/212 (5%) Query: 605 VPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNG 664 + + + +++ GAR +NL+ V + +P T TGVSGSGKS+L TL+ AQR+ Sbjct: 1 MHQSTDPYVRVRGAREHNLRGVDVDIPRDALTVFTGVSGSGKSSLAFGTLYAEAQRRYFE 60 Query: 665 ATIAEPAPYRDIQGLEHFDKV------IDIDQSPIGRTPRSNPATYTGVFTPVRELF--A 716 + G D V + ++Q RS+ T T + +R L+ A Sbjct: 61 SVAPYARRLIHQIGAPKVDSVTGLPPAVSLEQRRSTPGSRSSVGTVTLLSNSLRMLYSRA 120 Query: 717 GVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETL 776 G + A FS N G C +C G G I + VP ++ Sbjct: 121 GAYPAGAERLDSDAFSPNTAAGACPSCHGIGRIH---RTDEQLLVPDPDLSIRQGAIAAW 177 Query: 777 EIKYKGKTIHEVLDMTIEEAREFFDAVPALAR 808 ++GK + ++L+ + + +PA R Sbjct: 178 PGAWQGKNLRDILEALGHDVDAPWRELPARDR 209 Score = 77.3 bits (189), Expect = 3e-12, Method: Composition-based stats. Identities = 30/109 (27%), Positives = 45/109 (41%), Gaps = 19/109 (17%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 63 + + G HNL+ + P VTG+SGSGKS+L L E R E + + Sbjct: 475 VRLSGVDRHNLRGVTAEFPLGVFTAVTGVSGSGKSTLVGQALAGEVAGRLAE--PGFPVR 532 Query: 64 FLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLF 112 L + ++Q+ PRS + T T + D +R LF Sbjct: 533 RL-----------------VEVDQRPIGRTPRSNLATYTGLFDVVRRLF 564 >UniRef50_B6A038 Excinuclease ABC, A subunit n=8 Tax=Bacteria RepID=B6A038_RHILW Length = 861 Score = 694 bits (1791), Expect = 0.0, Method: Composition-based stats. Identities = 282/756 (37%), Positives = 417/756 (55%), Gaps = 46/756 (6%) Query: 224 ALELSGG----TAVVADMDDPKAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPT 279 AL+ G + V + + + G LE FS N P GACP Sbjct: 100 ALQQQRGSPTTRSSVGSVTTISNLLRMLYSRTGTYPAGQ--PHLEAEAFSPNTPEGACPQ 157 Query: 280 CDGLGVQQYFDPDRVIQNPELSLAGGAIRGWDRRNFYYFQMLKSLADHYKFDVEAPWGSL 339 C GLG ++ +P L++ A+ W + Q L+ + DV+ PW L Sbjct: 158 CHGLGRVHEVTETSMVPDPSLTIRERAVAAW--PLAWGGQNLRDILITLGIDVDKPWREL 215 Query: 340 SANVHKVVLYGSGKENIEFKYMN---------DRGDTSIRRHPFEGVLHNMERRYKETES 390 + +L+ + + R D F ++ + T+S Sbjct: 216 PEKTRQWILFTDEQPVVPVYPGLSHDQVQRAIKRKDEPSYMGTFSSARRHVTHSFATTQS 275 Query: 391 SAVREELAKFISNRPCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNN----- 445 + +++ A+++ + C CEG RLR+E+ V E I+ + + + F+ Sbjct: 276 AMMKKRAARYMISSACPLCEGKRLRKESLSVTFEGLDYAEINRLPMAAFKDIFSPYANVD 335 Query: 446 -------LKLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLA 498 K ++A + ++I ++ RL L+++GL YLTL RS TLS GE QR+RLA Sbjct: 336 AGKLKTMRKEHPEKAMVVQRIAADLCRRLSVLLDLGLGYLTLERSTPTLSPGELQRLRLA 395 Query: 499 SQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVI 558 +Q+ + L GV+YV+DEPS GLH D E LL L L+ +GN++ VVEH+ D +R AD V+ Sbjct: 396 TQVVSNLFGVVYVMDEPSAGLHPADTEALLRALDGLKSVGNSLFVVEHELDVVRHADWVV 455 Query: 559 DIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEVPKKRVPANPEKVLKLTGA 618 D+GP AG GGEV+ GP E + V S T +++ + +R P+ L+L+G Sbjct: 456 DVGPAAGELGGEVLYSGPPEGLRKVERSETARHLFAGAQKFSATRR---APDGWLRLSGI 512 Query: 619 RGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAE--------- 669 NNL+DV P+G+ T +TG+SGSGKS+L++ L + L + E Sbjct: 513 TRNNLQDVDCAFPLGVMTTVTGISGSGKSSLVSQVLVELVGEALGASVRVENDAEGEALE 572 Query: 670 -----PAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESRAR 724 P R GL+ ++I++DQ PIGRTPRSN ATYTG+F VR LFA E++ R Sbjct: 573 AGPSLPMQGRIEVGLDRIRRLIEVDQKPIGRTPRSNLATYTGLFDHVRSLFAATAEAKKR 632 Query: 725 GYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKYKGKT 784 Y GRFSFNV GRC C+G+G + VE+ FLP +Y PC C G RYN ETL+I+Y+GKT Sbjct: 633 RYDAGRFSFNVAKGRCPRCEGEGFVMVELLFLPSVYAPCPTCHGTRYNPETLKIRYRGKT 692 Query: 785 IHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLAREL 844 I +VL +T+ EA +FFD P++ + L+ L +VGL+Y+RLGQ AT SGGEAQR+KLA EL Sbjct: 693 ISQVLSLTVAEAWDFFDNAPSVQKSLEVLTEVGLSYLRLGQPATEFSGGEAQRIKLATEL 752 Query: 845 SKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADWIVDL 904 + G LY+LDEPTTGLH +D+++L+ L+ L + GNT++V++H++ + +DW++D+ Sbjct: 753 QRAQKGGALYVLDEPTTGLHPSDVERLVAQLNALVENGNTVIVVDHDMTLAAASDWVIDI 812 Query: 905 GPEGGSGGGEILVSGTPETVAECEASHTARFLKPML 940 GP G GG I+ SGTPE +A S TA +LK + Sbjct: 813 GPGAGDAGGRIVASGTPEHIAFARNSRTAPYLKRLF 848 Score = 185 bits (469), Expect = 1e-44, Method: Composition-based stats. Identities = 78/203 (38%), Positives = 105/203 (51%), Gaps = 15/203 (7%) Query: 403 NRPCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKE 462 PC +C GTR E + + + +++ A +FF+N Sbjct: 668 YAPCPTCHGTRYNPETLKIRYRGKTISQVLSLTVAEAWDFFDN--------------APS 713 Query: 463 IGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQI-GAGLVGVMYVLDEPSIGLHQ 521 + L+ L VGL+YL L + A SGGEAQRI+LA+++ A G +YVLDEP+ GLH Sbjct: 714 VQKSLEVLTEVGLSYLRLGQPATEFSGGEAQRIKLATELQRAQKGGALYVLDEPTTGLHP 773 Query: 522 RDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIM 581 D ERL+ L L + GNTVIVV+HD A+D VIDIGPGAG GG +VA G E I Sbjct: 774 SDVERLVAQLNALVENGNTVIVVDHDMTLAAASDWVIDIGPGAGDAGGRIVASGTPEHIA 833 Query: 582 AVPESLTGQYMSGKRKIEVPKKR 604 S T Y+ + K+ Sbjct: 834 FARNSRTAPYLKRLFPHDRQTKQ 856 Score = 182 bits (463), Expect = 5e-44, Method: Composition-based stats. Identities = 71/150 (47%), Positives = 96/150 (64%), Gaps = 19/150 (12%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 63 + VRGAR HNLKN+++ IPRD L+V TG+SGSGKSSLAF TLYAE QRRY+ES+S YAR+ Sbjct: 20 VRVRGAREHNLKNVDVDIPRDALVVFTGVSGSGKSSLAFSTLYAEAQRRYLESVSPYARR 79 Query: 64 FLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFAR-----VGEP 118 + M PDVD IEGL PA++++Q+ S RS+VG++T I + LR+L++R G+P Sbjct: 80 LFTQMSVPDVDQIEGLPPAVALQQQRGSPTTRSSVGSVTTISNLLRMLYSRTGTYPAGQP 139 Query: 119 R--------------CPDHDVPLAAQTVSQ 134 CP V++ Sbjct: 140 HLEAEAFSPNTPEGACPQCHGLGRVHEVTE 169 Score = 92.4 bits (228), Expect = 7e-17, Method: Composition-based stats. Identities = 52/260 (20%), Positives = 99/260 (38%), Gaps = 24/260 (9%) Query: 587 LTGQYMSGKRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGK 646 +T +++ G + V+++ GAR +NLK+V + +P TGVSGSGK Sbjct: 1 MTRRHVDGAVAAAQKPE-------GVVRVRGAREHNLKNVDVDIPRDALVVFTGVSGSGK 53 Query: 647 STLINDTLFPIAQRQLNGATIAEPAPYRDIQGLEHFDKV------IDIDQSPIGRTPRSN 700 S+L TL+ AQR+ + + D++ + + Q T RS+ Sbjct: 54 SSLAFSTLYAEAQRRYLESVSPYARRLFTQMSVPDVDQIEGLPPAVALQQQRGSPTTRSS 113 Query: 701 PATYTGVFTPVRELFAGVPE--SRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPD 758 + T + +R L++ + FS N G C C G G + Sbjct: 114 VGSVTTISNLLRMLYSRTGTYPAGQPHLEAEAFSPNTPEGACPQCHGLGRVH---EVTET 170 Query: 759 IYVPCDQCKGKRYNRETLEIKYKGKTIHEVL-DMTIEEAREFFDAVPALARKLQTLMDVG 817 VP + + + G+ + ++L + I+ + + + + + + Sbjct: 171 SMVPDPSLTIRERAVAAWPLAWGGQNLRDILITLGIDVDKPWRELPEKTRQWILFTDEQP 230 Query: 818 LTYIRLGQSATTLSGGEAQR 837 + + G LS + QR Sbjct: 231 VVPVYPG-----LSHDQVQR 245 Score = 87.0 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 68/336 (20%), Positives = 113/336 (33%), Gaps = 71/336 (21%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESL------ 57 + + G +NL++++ P + VTG+SGSGKSSL L S+ Sbjct: 507 LRLSGITRNNLQDVDCAFPLGVMTTVTGISGSGKSSLVSQVLVELVGEALGASVRVENDA 566 Query: 58 ---SAYARQFLSLMEKPDV--DHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLF 112 + A L + + +V D I L I ++QK PRS + T T + D++R LF Sbjct: 567 EGEALEAGPSLPMQGRIEVGLDRIRRL---IEVDQKPIGRTPRSNLATYTGLFDHVRSLF 623 Query: 113 ARVGEP-----------------RCPDHDVPLAAQTVSQMV-----------------DN 138 A E RCP + + + Sbjct: 624 AATAEAKKRRYDAGRFSFNVAKGRCPRCEGEGFVMVELLFLPSVYAPCPTCHGTRYNPET 683 Query: 139 VLSQPEGKRLMLLAPIIKERKGEH-------TKTLENLASQGYIRARI--------DGEV 183 + + GK + + + + K+LE L G R+ GE Sbjct: 684 LKIRYRGKTISQVLSLTVAEAWDFFDNAPSVQKSLEVLTEVGLSYLRLGQPATEFSGGEA 743 Query: 184 CDLSDPPKLELQKKHTIEVVVD--RFKVRDDLTQRLAESFETALELSGGTAVV--ADMDD 239 + +L+ +K V+D + +RL AL +G T +V DM Sbjct: 744 QRIKLATELQRAQKGGALYVLDEPTTGLHPSDVERLVAQL-NALVENGNTVIVVDHDMTL 802 Query: 240 PKAEELLFSANFACPICGYSM---RELEPRLFSFNN 272 A + + G + E F+ N+ Sbjct: 803 AAASDWVIDIGPGAGDAGGRIVASGTPEHIAFARNS 838 >UniRef50_Q9RCZ2 Putative excinuclease ABC subunit A n=3 Tax=Streptomyces RepID=Q9RCZ2_STRCO Length = 781 Score = 690 bits (1781), Expect = 0.0, Method: Composition-based stats. Identities = 281/711 (39%), Positives = 404/711 (56%), Gaps = 36/711 (5%) Query: 231 TAVVADMDDPKAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFD 290 + V + + + + G L+ FS N AGACP C GLG Sbjct: 100 RSSVGTVTNLSNSLRMLFSRAGTYPPGA--ERLDSDAFSPNTAAGACPECHGLGRVHRTT 157 Query: 291 PDRVIQNPELSLAGGAIRGWDRRNFYYFQMLKSLADHYKFDVEAPWGSLSANVHKVVLYG 350 + ++ +P LS+ GAI W + + L+ + D +DV+ PW L A + +L+ Sbjct: 158 EELLVPDPSLSIRDGAIAAW--PGAWQGKNLRDVLDALGYDVDRPWRELPAEAREWILFT 215 Query: 351 SGKENIEFKYMNDRGD-TSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASC 409 + + + + G + + + + + +++S+ +R + +F+++ PC C Sbjct: 216 DEQPVVTVHPVREAGRIQRPYQGTYMSARRYVLKTFADSKSATLRAKAERFLNSAPCPVC 275 Query: 410 EGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDRLKF 469 G RLR EA V V + ++ + + + A+ + +++ R+ Sbjct: 276 GGGRLRAEALAVTVGGRTVAELAALPLAELPRLL------PTEGEAAKVLAEDLISRIAP 329 Query: 470 LVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLG 529 +V +GL YL+L R TLS GE QR+RLA+Q+ +GL GV+YVLDEPS GLH D E LL Sbjct: 330 VVELGLGYLSLDRPTPTLSAGELQRLRLATQLRSGLFGVVYVLDEPSAGLHPADTEALLT 389 Query: 530 TLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTG 589 L L+ GN+V VVEH +R AD ++D+GP AG HGG V+ GP++ + V ES T Sbjct: 390 VLERLKAAGNSVFVVEHHLGVMRGADWIVDVGPLAGEHGGRVLYSGPVDGLARVAESATA 449 Query: 590 QYMSGKRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTL 649 +++ + V + R P + + +NL+ VT+ +P+G+ T +TGVSGSGKSTL Sbjct: 450 RHLFDRSPAPVREVRTPRG---AVTIGPVTRHNLRGVTVRVPLGVLTAVTGVSGSGKSTL 506 Query: 650 INDTLFPIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFT 709 + + + L D+++ +DQ PIGRTPRSN ATYTG+F Sbjct: 507 VGEI----------------------TEDLPGVDRLVSVDQRPIGRTPRSNLATYTGLFD 544 Query: 710 PVRELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGK 769 VR++FA +R RG+ GRFSFNV GGRCE CQG+G + VE+ FLP Y PC C G Sbjct: 545 VVRKVFAATDRARERGFGVGRFSFNVPGGRCETCQGEGFVSVELLFLPSTYAPCPDCGGA 604 Query: 770 RYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATT 829 RYN ETLE+ Y+G+ I EVLD+T+E A +FF PA+AR L L+DVGL Y+RLGQ AT Sbjct: 605 RYNPETLEVAYRGRNIAEVLDLTVEGAAQFFTDTPAVARSLAALLDVGLGYLRLGQPATE 664 Query: 830 LSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIE 889 LSGGEAQR+KLA EL + G TLY+LDEPTTGLH AD++ L+ LH L D G+T+VV+E Sbjct: 665 LSGGEAQRIKLASELQRGRRGHTLYLLDEPTTGLHPADVEVLMRQLHGLVDAGHTVVVVE 724 Query: 890 HNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLKPML 940 H++ V+ AD ++DLGP GG GG I+ GTP VA S TA +L L Sbjct: 725 HDMSVVAGADHVIDLGPGGGDAGGRIVAEGTPARVAGAAGSATAPYLARAL 775 Score = 170 bits (432), Expect = 2e-40, Method: Composition-based stats. Identities = 80/278 (28%), Positives = 123/278 (44%), Gaps = 32/278 (11%) Query: 3 KIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYAR 62 + VR AR HNLK +++ +PRD L V TG+SGSGKSSLAF T+YAE QRRY ES++ YAR Sbjct: 8 YVRVRDAREHNLKGVDVDVPRDVLAVFTGVSGSGKSSLAFGTVYAEAQRRYFESVAPYAR 67 Query: 63 QFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGE----- 117 + + + P V I GL PA+S++Q+ + RS+VGT+T + + LR+LF+R G Sbjct: 68 RLIHQIGAPKVGGITGLPPAVSLQQRRATPTSRSSVGTVTNLSNSLRMLFSRAGTYPPGA 127 Query: 118 --------------PRCPDHDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHT 163 CP+ V + + +L + A + Sbjct: 128 ERLDSDAFSPNTAAGACPECHGLGR---VHRTTEELLVPDPSLSIRDGAIAAWPGAWQGK 184 Query: 164 KTLENLASQGYIRARIDGEVCDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFET 223 + L + GY R E+ + L ++ + V R R+ ++ Sbjct: 185 NLRDVLDALGYDVDRPWRELPAEAREWILFTDEQPVVTVHPVR------EAGRIQRPYQG 238 Query: 224 ALELSGGTAVVADMDDPKAEEL----LFSANFACPICG 257 + + D A F + CP+CG Sbjct: 239 TYMSARRYVLKTFADSKSATLRAKAERFLNSAPCPVCG 276 Score = 88.9 bits (219), Expect = 8e-16, Method: Composition-based stats. Identities = 53/212 (25%), Positives = 85/212 (40%), Gaps = 11/212 (5%) Query: 605 VPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNG 664 + + + +++ AR +NLK V + +P + TGVSGSGKS+L T++ AQR+ Sbjct: 1 MHSPHDPYVRVRDAREHNLKGVDVDVPRDVLAVFTGVSGSGKSSLAFGTVYAEAQRRYFE 60 Query: 665 ATIAEPAPYRDIQGLEHFDKV------IDIDQSPIGRTPRSNPATYTGVFTPVRELF--A 716 + G + + + Q T RS+ T T + +R LF A Sbjct: 61 SVAPYARRLIHQIGAPKVGGITGLPPAVSLQQRRATPTSRSSVGTVTNLSNSLRMLFSRA 120 Query: 717 GVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETL 776 G A FS N G C C G G + ++ VP + Sbjct: 121 GTYPPGAERLDSDAFSPNTAAGACPECHGLGRVH---RTTEELLVPDPSLSIRDGAIAAW 177 Query: 777 EIKYKGKTIHEVLDMTIEEAREFFDAVPALAR 808 ++GK + +VLD + + +PA AR Sbjct: 178 PGAWQGKNLRDVLDALGYDVDRPWRELPAEAR 209 Score = 74.6 bits (182), Expect = 1e-11, Method: Composition-based stats. Identities = 30/121 (24%), Positives = 49/121 (40%), Gaps = 28/121 (23%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 63 + + HNL+ + + +P L VTG+SGSGKS+L + Sbjct: 470 VTIGPVTRHNLRGVTVRVPLGVLTAVTGVSGSGKSTLVGEI------------------- 510 Query: 64 FLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCPDH 123 + P VD + +S++Q+ PRS + T T + D +R +FA R Sbjct: 511 ---TEDLPGVDRL------VSVDQRPIGRTPRSNLATYTGLFDVVRKVFAATDRARERGF 561 Query: 124 D 124 Sbjct: 562 G 562 >UniRef50_D2AS77 Excinuclease ABC subunit A n=1 Tax=Streptosporangium roseum DSM 43021 RepID=D2AS77_STRRD Length = 880 Score = 688 bits (1776), Expect = 0.0, Method: Composition-based stats. Identities = 291/775 (37%), Positives = 402/775 (51%), Gaps = 58/775 (7%) Query: 218 AESFETALELSGGTAVVADMDDPKAEELLFSANFACPICGYSMRELEPRLFSFNNPAGAC 277 A + A + V + + + G L+ FS N P GAC Sbjct: 99 AVALRQARGGGSARSSVGTVTHLSNVLRMLFSRAGAYPPGA--EHLDSDSFSPNTPIGAC 156 Query: 278 PTCDGLGVQQYFDPDRVIQNPELSLAGGAIRGWDRRNFYYFQMLKSLADHYKFDVEAPWG 337 P C GLG + ++ +P LS+ GA+ W + + + + DV+ PW Sbjct: 157 PHCHGLGRVHTVSEESLVPDPGLSIREGAVAAW--PGAWQGKNYRDILVELGVDVDRPWS 214 Query: 338 SLSANVHKVVLYGSGKENIEFKYMNDRGD-TSIRRHPFEGVLHNMERRYKETESSAVREE 396 L A + +L + + + D G + F + Y T+S+++R Sbjct: 215 ELPAEQREWILMTDEQPVVTVHPVRDAGKVARDYQGTFSSARRYVLHTYATTKSASLRAR 274 Query: 397 LAKFISNRPCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIA 456 A+F+ + PC CEG RLR EA V + ++ + + E + AG Sbjct: 275 AARFLLSSPCPVCEGRRLRPEALAVRFAGRDITEMAALPLTELAEVLSGATRAGDLDAAG 334 Query: 457 EKILKE---------IGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVG 507 + + +R++ + +GL YL+ RS TLS GE QR+RLA+Q+ +GL G Sbjct: 335 PPDARAEAAAALAGNLLERIRTMAELGLGYLSTDRSTATLSSGELQRLRLATQLRSGLFG 394 Query: 508 VMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVH 567 V+YVLDEPS GLH D E LL + LR GN++ VVEH+ D +R AD ++D+GPGAG H Sbjct: 395 VLYVLDEPSAGLHPSDTEALLEAMRRLRGAGNSLFVVEHNLDVMRQADWIVDVGPGAGEH 454 Query: 568 GGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEVPKKRVPANPEKVLKLTGARGNNLKDVT 627 GG V+ G + + V S T +Y+ + + R P L+L G +NL+D+ Sbjct: 455 GGRVLYSGEVAGLARVAGSATRRYLF--EQADRTGDRDARRPSGWLELRGITRHNLRDLD 512 Query: 628 LTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLN------------------------ 663 + P+G FT +TGVSGSGKSTL++ L + L Sbjct: 513 VRFPLGTFTAVTGVSGSGKSTLVSQVLTGVVAEHLGADADDPGQLGAREGEDTGAGHEGG 572 Query: 664 ------------------GATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYT 705 G+T E + GLE +++ +DQ PIGRTPRSN ATYT Sbjct: 573 GGRAGPDGSTTFPGPGPDGSTPEEVVTHVAATGLEPIRRLVRVDQRPIGRTPRSNLATYT 632 Query: 706 GVFTPVRELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQ 765 G+F VR LFA PE+R GY GRFSFNV GGRCE CQG G I +EM FLP PC Sbjct: 633 GLFDAVRRLFAATPEARRHGYDAGRFSFNVPGGRCENCQGQGSIFIEMLFLPGATAPCPV 692 Query: 766 CKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQ 825 C G RYN ETL + G++I +VLDMT+E+AR+F VP R L+ L +VGL Y+RLGQ Sbjct: 693 CHGARYNPETLRVTVAGRSIADVLDMTVEQARDFLREVPGAVRSLEVLSEVGLGYLRLGQ 752 Query: 826 SATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTI 885 ATTLSGGEAQRVKLA EL + G TLY+LDEPT+GLH AD+ L+ L L GNT+ Sbjct: 753 PATTLSGGEAQRVKLASELQRVRRGHTLYVLDEPTSGLHPADVDLLVAQLRGLVAAGNTV 812 Query: 886 VVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLKPML 940 V++EH++DV+ DW++DLGP GG GG ++ +G P VA S TA +L L Sbjct: 813 VLVEHDMDVVAGTDWVIDLGPGGGEAGGRVVAAGPPHVVAGARDSATAPYLARRL 867 Score = 171 bits (434), Expect = 1e-40, Method: Composition-based stats. Identities = 75/204 (36%), Positives = 102/204 (50%), Gaps = 15/204 (7%) Query: 402 SNRPCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILK 461 + PC C G R E V V + + DM++ A +F + Sbjct: 686 ATAPCPVCHGARYNPETLRVTVAGRSIADVLDMTVEQARDFLREVP-------------- 731 Query: 462 EIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVG-VMYVLDEPSIGLH 520 L+ L VGL YL L + A TLSGGEAQR++LAS++ G +YVLDEP+ GLH Sbjct: 732 GAVRSLEVLSEVGLGYLRLGQPATTLSGGEAQRVKLASELQRVRRGHTLYVLDEPTSGLH 791 Query: 521 QRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAI 580 D + L+ L L GNTV++VEHD D + D VID+GPG G GG VVA GP + Sbjct: 792 PADVDLLVAQLRGLVAAGNTVVLVEHDMDVVAGTDWVIDLGPGGGEAGGRVVAAGPPHVV 851 Query: 581 MAVPESLTGQYMSGKRKIEVPKKR 604 +S T Y++ + +R Sbjct: 852 AGARDSATAPYLARRLARREGGRR 875 Score = 165 bits (418), Expect = 7e-39, Method: Composition-based stats. Identities = 78/293 (26%), Positives = 128/293 (43%), Gaps = 38/293 (12%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 63 I VR AR HNL+++++ PRD++++ TG+SGSGKSSLAF T+YAE QRRY+ES++ YAR+ Sbjct: 21 IRVRDAREHNLRHVDVEAPRDRIVLFTGVSGSGKSSLAFGTVYAEAQRRYLESVTPYARR 80 Query: 64 FLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVG------- 116 + + P V I GL PA+++ Q + RS+VGT+T + + LR+LF+R G Sbjct: 81 LIEQVGAPKVGDITGLPPAVALRQARGGGSARSSVGTVTHLSNVLRMLFSRAGAYPPGAE 140 Query: 117 ------------EPRCPDHDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTK 164 CP TVS+ ++ P + R+G Sbjct: 141 HLDSDSFSPNTPIGACPHCHGLGRVHTVSE------------ESLVPDPGLSIREGAVAA 188 Query: 165 TLENLASQGYIRARIDGEVCDLSDPPKLELQKKHTIEVVVDRFKV---RDDLTQRLAESF 221 + Y ++ V +L +++ I + ++ V ++A + Sbjct: 189 WPGAWQGKNYRDILVELGVDVDRPWSELPAEQREWILMTDEQPVVTVHPVRDAGKVARDY 248 Query: 222 ETALELSGGTAVVADMDDPKAEELLFSANF----ACPICGYSMRELEPRLFSF 270 + + + A +A F CP+C E F Sbjct: 249 QGTFSSARRYVLHTYATTKSASLRARAARFLLSSPCPVCEGRRLRPEALAVRF 301 Score = 85.8 bits (211), Expect = 7e-15, Method: Composition-based stats. Identities = 51/219 (23%), Positives = 86/219 (39%), Gaps = 13/219 (5%) Query: 599 EVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIA 658 P + ++++ AR +NL+ V + P TGVSGSGKS+L T++ A Sbjct: 7 HPPAGLPDHATDPMIRVRDAREHNLRHVDVEAPRDRIVLFTGVSGSGKSSLAFGTVYAEA 66 Query: 659 QRQLNGATIAEPAPYRDIQGLEHFDKV------IDIDQSPIGRTPRSNPATYTGVFTPVR 712 QR+ + + G + + + Q+ G + RS+ T T + +R Sbjct: 67 QRRYLESVTPYARRLIEQVGAPKVGDITGLPPAVALRQARGGGSARSSVGTVTHLSNVLR 126 Query: 713 ELF--AGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKR 770 LF AG A FS N G C C G G + + VP + Sbjct: 127 MLFSRAGAYPPGAEHLDSDSFSPNTPIGACPHCHGLGRVHT---VSEESLVPDPGLSIRE 183 Query: 771 YNRETLEIKYKGKTIHEVL-DMTIEEAREFFDAVPALAR 808 ++GK ++L ++ ++ R + +PA R Sbjct: 184 GAVAAWPGAWQGKNYRDILVELGVDVDRPW-SELPAEQR 221 Score = 70.8 bits (172), Expect = 2e-10, Method: Composition-based stats. Identities = 39/157 (24%), Positives = 61/157 (38%), Gaps = 36/157 (22%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTL---------------YAE 48 +E+RG HNL+++++ P VTG+SGSGKS+L L Sbjct: 498 LELRGITRHNLRDLDVRFPLGTFTAVTGVSGSGKSTLVSQVLTGVVAEHLGADADDPGQL 557 Query: 49 GQRRYVESLSAYARQFL-------SLMEKPDVD-----------HIEGLSPA---ISIEQ 87 G R ++ + + + P D GL P + ++Q Sbjct: 558 GAREGEDTGAGHEGGGGRAGPDGSTTFPGPGPDGSTPEEVVTHVAATGLEPIRRLVRVDQ 617 Query: 88 KSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCPDHD 124 + PRS + T T + D +R LFA E R +D Sbjct: 618 RPIGRTPRSNLATYTGLFDAVRRLFAATPEARRHGYD 654 >UniRef50_D1BHG7 Excinuclease ABC, A subunit n=1 Tax=Sanguibacter keddieii DSM 10542 RepID=D1BHG7_SANKS Length = 863 Score = 685 bits (1768), Expect = 0.0, Method: Composition-based stats. Identities = 313/893 (35%), Positives = 451/893 (50%), Gaps = 94/893 (10%) Query: 100 TITEIHDYLRLLFARVGEPRCPDHDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERK 159 T T ++R+ A R D DVP +V GK + I E + Sbjct: 5 TPTTPDAFVRVRGANENNLRDVDVDVP-----RDAIVAFTGVSGSGKSSLAFGTIFTEAQ 59 Query: 160 GEHTK----TLENLASQGYIRARIDGEVCDLSD-PPKLELQKKHTIEVVVDRFKVRDDLT 214 + + L QG+ D V ++ PP + LQ++ Sbjct: 60 RRYLESVAPYARRLIQQGH-----DPHVESITGLPPAVALQQRRGAP------------- 101 Query: 215 QRLAESFETALELSGGTAVVADMDDPKAEELLFSANFACPICGYSMRELEPRLFSFNNPA 274 + V + + + GY+ L+ FS N A Sbjct: 102 --------------SSRSSVGTVTTLSNSLRMLFSRAGTFPEGYA-TRLDSDAFSPNTVA 146 Query: 275 GACPTCDGLGVQQYFDPDRVIQNPELSLAGGAIRGWDRRNFYYFQMLKSLADHYKFDVEA 334 GACP C G+GV + D ++ +P LS+ GAI W + + L+ + +DV+ Sbjct: 147 GACPECHGVGVARTVTEDTLVADPSLSIRDGAITAW--PGAWQGKNLRDIVIALGYDVDR 204 Query: 335 PWGSLSANVHKVVLYGSGKENIEFKYMNDRGDTSIRRHPFEGVLHNMERRYKETESSAVR 394 PW L +L+ + ++ DR F + ++ S +R Sbjct: 205 PWRDLPREDRDWLLFTDEQPVVQITPQRDRV-AKPYNGRFWSAQKYVLHILADSSSQTMR 263 Query: 395 EELAKFISNRPCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNL-------- 446 ++ +F+ + PC C GT LR+EA V + ++ + + E Sbjct: 264 AKVLQFVRSGPCPVCGGTGLRQEALAVTFAGRTIAEMNALPLTELAEVIRPTTQLTDAAP 323 Query: 447 ----KLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIG 502 +G+ +A I ++ R+ L ++GL YL L R TLS GE QR+RLA+Q+ Sbjct: 324 ALPTNRSGEHTDVAVAITTDLLARIGVLTDLGLGYLGLGRVTTTLSPGEMQRLRLATQLR 383 Query: 503 AGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGP 562 +GL GV+YVLDEPS GLH D E L+ L L++ GN+V +VEH+ D +R AD V+D+GP Sbjct: 384 SGLFGVVYVLDEPSAGLHPADAEPLMEVLEQLKESGNSVFIVEHNMDLVRKADWVVDVGP 443 Query: 563 GAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEVPKKRVPANPEKVLKLTGARGNN 622 AG GGEV+ G + + V +S+T ++ + + +R P+ L + G +N Sbjct: 444 AAGTGGGEVLYSGAVAGLADVEQSVTRPFLF-PEQGDGAVERPVREPKGWLTVEGVTVHN 502 Query: 623 LKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAEPA----------- 671 L + ++P+G+ +TGVSGSGKSTL++ L + + LNG + + Sbjct: 503 LDGLDASVPLGMLVAVTGVSGSGKSTLVSRVLRDVVRDHLNGDGLPGGSVAVDEDVDGAE 562 Query: 672 ------------------------PYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGV 707 RD QGLEH D+++ +DQ PIGRTPRSN ATYTG+ Sbjct: 563 GTAEESEEAGLSEAVLPDARADVLTVRDAQGLEHVDRLVQVDQKPIGRTPRSNLATYTGL 622 Query: 708 FTPVRELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCK 767 F VR FA +R RGYT GRFSFNV GGRCE C G+G + VE+ FLP Y C +C Sbjct: 623 FDAVRSAFAATDLARERGYTAGRFSFNVAGGRCETCLGEGFVSVELLFLPGSYGKCPECH 682 Query: 768 GKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSA 827 G RYN ETLE+ Y G++I +VL +T+E+A E +PA AR L+TL+DVGL Y+RLGQ A Sbjct: 683 GARYNDETLEVTYDGRSIADVLALTVEDAAEALSGIPAAARSLRTLLDVGLGYLRLGQPA 742 Query: 828 TTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVV 887 T LSGGEAQR+KLA EL + G TLY+LDEPTTGLH AD++ LL L L D G+++V+ Sbjct: 743 TELSGGEAQRIKLATELQRVRRGHTLYLLDEPTTGLHPADVRLLLGQLESLVDSGDSVVI 802 Query: 888 IEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLKPML 940 +EH++DV+ +ADW+VDLGP GG GG ++ SGTP VA S TA +L L Sbjct: 803 VEHDMDVVASADWVVDLGPSGGDAGGRVVASGTPVDVAAEAGSRTAPYLATAL 855 Score = 178 bits (451), Expect = 1e-42, Method: Composition-based stats. Identities = 72/204 (35%), Positives = 103/204 (50%), Gaps = 15/204 (7%) Query: 402 SNRPCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILK 461 S C C G R E V + + + +++ A E + + A + Sbjct: 674 SYGKCPECHGARYNDETLEVTYDGRSIADVLALTVEDAAEALSGIPAAARS--------- 724 Query: 462 EIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVG-VMYVLDEPSIGLH 520 L+ L++VGL YL L + A LSGGEAQRI+LA+++ G +Y+LDEP+ GLH Sbjct: 725 -----LRTLLDVGLGYLRLGQPATELSGGEAQRIKLATELQRVRRGHTLYLLDEPTTGLH 779 Query: 521 QRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAI 580 D LLG L L D G++V++VEHD D + +AD V+D+GP G GG VVA G + Sbjct: 780 PADVRLLLGQLESLVDSGDSVVIVEHDMDVVASADWVVDLGPSGGDAGGRVVASGTPVDV 839 Query: 581 MAVPESLTGQYMSGKRKIEVPKKR 604 A S T Y++ P R Sbjct: 840 AAEAGSRTAPYLATALGERGPTSR 863 Score = 170 bits (432), Expect = 2e-40, Method: Composition-based stats. Identities = 75/287 (26%), Positives = 136/287 (47%), Gaps = 27/287 (9%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 63 + VRGA +NL+++++ +PRD ++ TG+SGSGKSSLAF T++ E QRRY+ES++ YAR+ Sbjct: 13 VRVRGANENNLRDVDVDVPRDAIVAFTGVSGSGKSSLAFGTIFTEAQRRYLESVAPYARR 72 Query: 64 FLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGE------ 117 + P V+ I GL PA++++Q+ + + RS+VGT+T + + LR+LF+R G Sbjct: 73 LIQQGHDPHVESITGLPPAVALQQRRGAPSSRSSVGTVTTLSNSLRMLFSRAGTFPEGYA 132 Query: 118 --------------PRCPDHDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHT 163 CP+ A+T + ++ L + A + Sbjct: 133 TRLDSDAFSPNTVAGACPECHGVGVART---VTEDTLVADPSLSIRDGAITAWPGAWQGK 189 Query: 164 KTLENLASQGYIRARIDGEVCDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFET 223 + + + GY R ++ L ++ +++ R +V R + + Sbjct: 190 NLRDIVIALGYDVDRPWRDLPREDRDWLLFTDEQPVVQITPQRDRVAKPYNGRFWSAQKY 249 Query: 224 ALELSGGTAVVADMDDPKAEELLFSANFACPICGYSMRELEPRLFSF 270 L + ++ +A+ L F + CP+CG + E +F Sbjct: 250 VLHILADSSS----QTMRAKVLQFVRSGPCPVCGGTGLRQEALAVTF 292 Score = 70.4 bits (171), Expect = 3e-10, Method: Composition-based stats. Identities = 37/141 (26%), Positives = 56/141 (39%), Gaps = 33/141 (23%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAF--------------------- 42 + V G HNL ++ +P L+ VTG+SGSGKS+L Sbjct: 493 LTVEGVTVHNLDGLDASVPLGMLVAVTGVSGSGKSTLVSRVLRDVVRDHLNGDGLPGGSV 552 Query: 43 ----DTLYAEGQRR------YVESLSAYARQFLSLMEKPDVDHIEGLSPAISIEQKSTSH 92 D AEG E++ AR ++ D +E + + ++QK Sbjct: 553 AVDEDVDGAEGTAEESEEAGLSEAVLPDARA--DVLTVRDAQGLEHVDRLVQVDQKPIGR 610 Query: 93 NPRSTVGTITEIHDYLRLLFA 113 PRS + T T + D +R FA Sbjct: 611 TPRSNLATYTGLFDAVRSAFA 631 >UniRef50_Q18CU1 Putative DNA repair protein n=6 Tax=Clostridium difficile RepID=Q18CU1_CLOD6 Length = 1142 Score = 682 bits (1759), Expect = 0.0, Method: Composition-based stats. Identities = 277/744 (37%), Positives = 425/744 (57%), Gaps = 35/744 (4%) Query: 220 SFETALELSGGTAVVADMDDPKAEELLFS--------------------ANFACPICGYS 259 + E + V + + CP C Sbjct: 405 AIEQKKGSQNPRSTVGTLTSIWDYLRMLFVSIGKSYCPYCKIPLEKKNNTKNYCPHCQTI 464 Query: 260 MRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPELSLAGGA------IRGWDRR 313 ++ F+ N+ GAC C+GLG +P ++++P +S+ GA +RG Sbjct: 465 FSKINTSTFNANSHTGACHDCNGLGFTYQVNPQLIVKDPTISILDGATYYFGKLRGKKPN 524 Query: 314 NFYYFQMLKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKENIEFKYMNDRGDTSIRRHP 373 + L ++A D++ PW L + +LYG+ + EF + + ++ IRR P Sbjct: 525 GNWMVGELYAIAKDKNIDLDIPWNELPRDFIDAILYGTDDKIYEFSFESKGRESKIRR-P 583 Query: 374 FEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGTRLRREARHVYVENTPLPAISD 433 G +++++R ++E+ S L ++++ PC +C G L EAR ++ P ++ Sbjct: 584 ASGAINHIQRLFRESSSEN--NTLHQYMNKIPCNTCGGELLCIEARFTTIKGYRFPELTK 641 Query: 434 MSIGHAMEFFNNLK--LAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTLSRSAETLSGGE 491 M+I + L L + IL E+ R+ +L+ VGL+Y++ R+A TLSGGE Sbjct: 642 MTIEQLWNWLCELPNQLQKNELSLVNDILTELKIRVSYLLKVGLSYISTDRTAPTLSGGE 701 Query: 492 AQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAI 551 QR+RL+SQ+G+ LVG+ Y+LDEPSIGLH RD+ ++ + LRD GNTVIVVEHD+D I Sbjct: 702 LQRVRLSSQLGSELVGLTYILDEPSIGLHPRDHNLIIKMIEELRDKGNTVIVVEHDKDTI 761 Query: 552 RAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEVPKKRVPANPEK 611 +AD++ID+GP AG GG ++AEG + I+ P S+TG+Y+S K K +P+ K Sbjct: 762 LSADYIIDVGPSAGTKGGFIIAEGTTQEIIKNPNSITGKYLSTYNKTGSQNKTIPS---K 818 Query: 612 VLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAEPA 671 L L G NNLK++ + +P+ ITGVSGSGKS+L+ +L P + +L +I + Sbjct: 819 WLSLKGCHANNLKNIDVEIPLNCMCSITGVSGSGKSSLVFHSLLPALEEKLKQKSIPD-K 877 Query: 672 PYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESRARGYTPGRF 731 Y + G + D I +DQ+PIG++ RS PATY +F +R LFA P+++ + F Sbjct: 878 NYTEFTGFDAIDDFILMDQTPIGKSSRSTPATYINIFDEIRSLFAETPQAKQKLLDESYF 937 Query: 732 SFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKYKGKTIHEVLDM 791 SFN + G+C CQG G K+ + ++ D +V C +C+GKRY +E L I+YKGKTI ++LDM Sbjct: 938 SFNSKKGQCPNCQGLGKTKIILQYMADQWVTCSECQGKRYQKEILSIQYKGKTIADILDM 997 Query: 792 TIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQ 851 + EA+ FF + RKL L +VGL Y++LGQ+ LSGGE+QR+KLA+EL + + Sbjct: 998 EVAEAKTFFSDCSDIYRKLSLLDEVGLGYLKLGQNTLGLSGGESQRIKLAKELGTKTKKR 1057 Query: 852 TLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADWIVDLGPEGGSG 911 LYILDEPTTGLHF DI+ LL KL ++ +++++IEHN +VI+ +DWI+D+GP+ G Sbjct: 1058 MLYILDEPTTGLHFKDIENLLITFRKLVNEQHSLLIIEHNTEVIRASDWIIDIGPDSGIN 1117 Query: 912 GGEILVSGTPETVAECEASHTARF 935 GGEI+ SGTP+ + S T F Sbjct: 1118 GGEIVASGTPDEIKINPNSITGHF 1141 Score = 186 bits (472), Expect = 4e-45, Method: Composition-based stats. Identities = 66/129 (51%), Positives = 95/129 (73%), Gaps = 1/129 (0%) Query: 3 KIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYAR 62 I ++G R +NLK++ + IP++++ V+TG+SGSGKSSLAFDT+Y EG+RRY E+LS A+ Sbjct: 325 SIYLKGGRQNNLKDVEVTIPKNQITVITGVSGSGKSSLAFDTIYEEGKRRYFENLSNGAK 384 Query: 63 QFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCPD 122 ++KP+ D ++GL+P I+IEQK S NPRSTVGT+T I DYLR+LF +G+ CP Sbjct: 385 -LSEQLQKPEFDLLQGLTPTIAIEQKKGSQNPRSTVGTLTSIWDYLRMLFVSIGKSYCPY 443 Query: 123 HDVPLAAQT 131 +PL + Sbjct: 444 CKIPLEKKN 452 Score = 157 bits (397), Expect = 2e-36, Method: Composition-based stats. Identities = 70/192 (36%), Positives = 108/192 (56%), Gaps = 17/192 (8%) Query: 761 VPCDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAVP---------------- 804 +PC+ C G+ E KG E+ MTIE+ + +P Sbjct: 612 IPCNTCGGELLCIEARFTTIKGYRFPELTKMTIEQLWNWLCELPNQLQKNELSLVNDILT 671 Query: 805 ALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLH 864 L ++ L+ VGL+YI ++A TLSGGE QRV+L+ +L G T YILDEP+ GLH Sbjct: 672 ELKIRVSYLLKVGLSYISTDRTAPTLSGGELQRVRLSSQLGSELVGLT-YILDEPSIGLH 730 Query: 865 FADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETV 924 D ++ ++ +LRD+GNT++V+EH+ D I +AD+I+D+GP G+ GG I+ GT + + Sbjct: 731 PRDHNLIIKMIEELRDKGNTVIVVEHDKDTILSADYIIDVGPSAGTKGGFIIAEGTTQEI 790 Query: 925 AECEASHTARFL 936 + S T ++L Sbjct: 791 IKNPNSITGKYL 802 Score = 98.1 bits (243), Expect = 1e-18, Method: Composition-based stats. Identities = 47/196 (23%), Positives = 74/196 (37%), Gaps = 45/196 (22%) Query: 2 DKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYA 61 + ++G +NLKNI++ IP + + +TG+SGSGKSSL F SL Sbjct: 818 KWLSLKGCHANNLKNIDVEIPLNCMCSITGVSGSGKSSLVF------------HSLLPAL 865 Query: 62 RQFLSLMEKPD--------VDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFA 113 + L PD D I+ I ++Q + RST T I D +R LFA Sbjct: 866 EEKLKQKSIPDKNYTEFTGFDAIDDF---ILMDQTPIGKSSRSTPATYINIFDEIRSLFA 922 Query: 114 RVGEPR-----------------CPDHDV----PLAAQTVSQMVDNVLSQPEGKRLMLLA 152 + + CP+ + Q ++ S+ +GKR Sbjct: 923 ETPQAKQKLLDESYFSFNSKKGQCPNCQGLGKTKIILQYMADQW-VTCSECQGKRYQKEI 981 Query: 153 PIIKERKGEHTKTLEN 168 I+ + L+ Sbjct: 982 LSIQYKGKTIADILDM 997 Score = 91.2 bits (225), Expect = 2e-16, Method: Composition-based stats. Identities = 54/186 (29%), Positives = 81/186 (43%), Gaps = 7/186 (3%) Query: 608 NPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQL----- 662 + + + L G R NNLKDV +T+P T ITGVSGSGKS+L DT++ +R+ Sbjct: 321 HNKSSIYLKGGRQNNLKDVEVTIPKNQITVITGVSGSGKSSLAFDTIYEEGKRRYFENLS 380 Query: 663 NGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESR 722 NGA ++E + L+ I I+Q + PRS T T ++ +R LF + +S Sbjct: 381 NGAKLSEQLQKPEFDLLQGLTPTIAIEQKKGSQNPRSTVGTLTSIWDYLRMLFVSIGKSY 440 Query: 723 ARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYV-PCDQCKGKRYNRET-LEIKY 780 N C CQ F + + C C G + + ++ Sbjct: 441 CPYCKIPLEKKNNTKNYCPHCQTIFSKINTSTFNANSHTGACHDCNGLGFTYQVNPQLIV 500 Query: 781 KGKTIH 786 K TI Sbjct: 501 KDPTIS 506 >UniRef50_C6R915 UvrABC system protein A n=2 Tax=Corynebacterium RepID=C6R915_9CORY Length = 806 Score = 674 bits (1738), Expect = 0.0, Method: Composition-based stats. Identities = 255/728 (35%), Positives = 386/728 (53%), Gaps = 24/728 (3%) Query: 220 SFETALELSGGTAVVADMDDPKAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPT 279 + + + G + V + L + G + L FS N P G CP Sbjct: 90 ALQQSTSGGGARSTVGTVSALSNSVRLLYSRA-----GDNPEGLYSDSFSPNTPEGMCPQ 144 Query: 280 CDGLGVQQYFDPDRVIQNPELSLAGGAIRGWDRRNFYYFQMLKSLADHYKFDVEAPWGSL 339 C G GV D ++ +P LS+ GAI+ W + + + + +D+++PW L Sbjct: 145 CHGTGVVHEPTEDSMVPDPTLSIEEGAIQAW--PGAWAGKNFHDILMNLGYDLDSPWQEL 202 Query: 340 SANVHKVVLYGSGKENIEFKYMNDRGD-TSIRRHPFEGVLHNMERRYKETESSAVREELA 398 +L+ + + K + + + V + + ET+S +R+ Sbjct: 203 PQEDRDWILFTEERPVVTVKPLRGKDQIQRNYEGTWRSVASYLNKTLAETQSDTLRKRTL 262 Query: 399 KFISNRPCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEK 458 ++ +R C +C G RL A V P+ + + + E + K + + Sbjct: 263 SYMESRECETCGGRRLNPAALKVTYAGMPIDELGALPLDRVHEVLS--KQNPEENSAEDL 320 Query: 459 ILKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIG 518 +L++I L + +GL +L+L R ++LSGGE QRIRLA+Q+ +GL GV YVLDEPS G Sbjct: 321 LLRQILPALTSALELGLAHLSLDRPTQSLSGGEMQRIRLAAQLRSGLFGVAYVLDEPSAG 380 Query: 519 LHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLE 578 LH + + ++ GN+V++VEHD D + AD ++D+GP AG GG VV GP+E Sbjct: 381 LHPDERDAVMDMCRRFIAAGNSVLLVEHDMDLVAQADWLVDVGPLAGERGGNVVYSGPVE 440 Query: 579 AIMAVPESLTGQYMSGKRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCI 638 A ++ T ++ + R P++ L L G ++ ++ + +G FT + Sbjct: 441 DYDA--DTPTANALAHRTLTLSDDPRTPSSH---LALRGINARSIDNLDVDFGLGQFTAV 495 Query: 639 TGVSGSGKSTLINDTLFPIAQRQLNGATIAEPAP-----YRDIQGLEHFDKVIDIDQSPI 693 GVSGSGKSTL++ L + ++ + E +G + +V+ I Q PI Sbjct: 496 AGVSGSGKSTLVSTVLAGLLRQSATAVSDEEETEDKGWSVESTEGFDRVKRVVQITQKPI 555 Query: 694 GRTPRSNPATYTGVFTPVRELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEM 753 GRTPRS ATYTG+F VR+LFA E++ R +T RFS+NV+ G+C C G G I+VE+ Sbjct: 556 GRTPRSTLATYTGLFDNVRKLFASTDEAKQRKWTVSRFSYNVKQGQCPTCGGAGKIEVEL 615 Query: 754 HFLPDIYVPCDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTL 813 FLP Y C +C G R+N ETLE+ ++G+TI ++L++T++EA E F + R + TL Sbjct: 616 VFLPGSYTTCPECGGARFNDETLEVTWQGRTIADILELTVDEAAEVFAEEEKIYRAIATL 675 Query: 814 MDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGT---GQTLYILDEPTTGLHFADIQQ 870 VGL Y+RLGQ A LSGGEAQR+KLA EL + G T+Y+LDEPTTGLH ADI Sbjct: 676 QAVGLGYLRLGQGAPELSGGEAQRIKLATELQRSRNSRRGHTVYLLDEPTTGLHPADIDL 735 Query: 871 LLDVLHKLRDQGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEAS 930 L LHKL D G+T++V+EH+L V+ AD I+++GP G GG I+ TP VA E + Sbjct: 736 LNTELHKLADAGHTVIVVEHDLSVMANADRIIEMGPGAGEDGGRIIADATPAQVAA-EDT 794 Query: 931 HTARFLKP 938 T R L Sbjct: 795 ATGRALSA 802 Score = 176 bits (446), Expect = 4e-42, Method: Composition-based stats. Identities = 65/165 (39%), Positives = 98/165 (59%), Gaps = 19/165 (11%) Query: 1 MDKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAY 60 M I+VR A HNL+N+++ +PR KL+ VTG+SGSGKSSLAF T++ EGQRRY+ES++ + Sbjct: 7 MSTIKVRDAHLHNLRNVDVDMPRGKLVAVTGVSGSGKSSLAFGTIHGEGQRRYLESVAPF 66 Query: 61 ARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGE--- 117 AR+ +S P V +EGL P ++++Q ++ RSTVGT++ + + +RLL++R G+ Sbjct: 67 ARRLISSAVDPQVSQVEGLPPTVALQQSTSGGGARSTVGTVSALSNSVRLLYSRAGDNPE 126 Query: 118 ----------------PRCPDHDVPLAAQTVSQMVDNVLSQPEGK 146 P+C V S + D LS EG Sbjct: 127 GLYSDSFSPNTPEGMCPQCHGTGVVHEPTEDSMVPDPTLSIEEGA 171 Score = 95.1 bits (235), Expect = 1e-17, Method: Composition-based stats. Identities = 46/184 (25%), Positives = 74/184 (40%), Gaps = 14/184 (7%) Query: 615 LTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAEPAPYR 674 + A +NL++V + +P G +TGVSGSGKS+L T+ QR+ + Sbjct: 12 VRDAHLHNLRNVDVDMPRGKLVAVTGVSGSGKSSLAFGTIHGEGQRRYLESVAPFARRLI 71 Query: 675 DIQGLEHFDKV------IDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESRARGYTP 728 +V + + QS G RS T + + VR L++ + G Sbjct: 72 SSAVDPQVSQVEGLPPTVALQQSTSGGGARSTVGTVSALSNSVRLLYSRAGD-NPEGLYS 130 Query: 729 GRFSFNVRGGRCEACQGDGVIK--VEMHFLPDIYVPCDQCKGKRYNRETLEIKYKGKTIH 786 FS N G C C G GV+ E +PD + ++ + + GK H Sbjct: 131 DSFSPNTPEGMCPQCHGTGVVHEPTEDSMVPDPTLSIEEGAI-----QAWPGAWAGKNFH 185 Query: 787 EVLD 790 ++L Sbjct: 186 DILM 189 Score = 78.1 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 33/140 (23%), Positives = 56/140 (40%), Gaps = 18/140 (12%) Query: 3 KIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYAR 62 + +RG ++ N+++ + V G+SGSGKS+L T+ A R+ ++S Sbjct: 469 HLALRGINARSIDNLDVDFGLGQFTAVAGVSGSGKSTLV-STVLAGLLRQSATAVSDEEE 527 Query: 63 QFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFA--------- 113 + + + + I QK PRST+ T T + D +R LFA Sbjct: 528 TEDKGWSVESTEGFDRVKRVVQITQKPIGRTPRSTLATYTGLFDNVRKLFASTDEAKQRK 587 Query: 114 --------RVGEPRCPDHDV 125 V + +CP Sbjct: 588 WTVSRFSYNVKQGQCPTCGG 607 >UniRef50_B1L257 Excinuclease ABC, A subunit n=1 Tax=Clostridium botulinum A3 str. Loch Maree RepID=B1L257_CLOBM Length = 830 Score = 673 bits (1737), Expect = 0.0, Method: Composition-based stats. Identities = 280/709 (39%), Positives = 409/709 (57%), Gaps = 19/709 (2%) Query: 239 DPKAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNP 298 D E L A +CP C ++L FSFN P GACPTC+G+G+ D ++I + Sbjct: 129 DLDGESELDEATISCPHCQTKHQKLNMGHFSFNKPQGACPTCNGVGIVTTLDLSQLI-DE 187 Query: 299 ELSLAGGAIRGWDRRNFY--YFQMLKSLADHYKF--DVEAPWGSLSANVHKVVLYGSGKE 354 +L++ GGA+ W Y L+ A HY F D + V G E Sbjct: 188 KLTIEGGAVSLWLDPVIRTHYANTLRKCAAHYGFIFDPTKAIKDYNELERIVFYDGVDSE 247 Query: 355 NIEFKYMNDRGDTSIRRHPFEGVLHNMERRYKET-ESSAVREELAKFISNRPCASCEGTR 413 + + + + + F G+ + M+ + E+ ++ + I C C G R Sbjct: 248 AFKKYFPDKKAPKRVNDGYFRGMRNFMQEKAAESVRKEIKNSKIERCIRKTDCPDCHGAR 307 Query: 414 LRREARHVYVENTPLPAISDMSIGHAMEFFNNL--KLAGQRAKIAEKILKEIGDRLKFLV 471 L R V ++ + +S ++ L L+ +A ++ +I R K ++ Sbjct: 308 LGAVGRTVTLDGLTIIEMSAFTMEQLYGKIKTLSENLSEIAQIVASAVMGDILKRTKGII 367 Query: 472 NVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTL 531 +GL YL++ R TLSGGEAQRIRLA+ + +GL GV+Y+LDEP+ GLH RD + LL L Sbjct: 368 KIGLGYLSIDRLLGTLSGGEAQRIRLANVMDSGLTGVLYILDEPTTGLHPRDTQLLLQAL 427 Query: 532 IHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQY 591 LRDLGNTV+V+EHD D + D++ID GPGAG GG++VA G I+ S TG+Y Sbjct: 428 NRLRDLGNTVLVIEHDMDFVAHCDYIIDFGPGAGSGGGQIVATGTPREIVKNKASATGKY 487 Query: 592 MSGKRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLIN 651 ++ + +PK+ N + + A +NL+++++ +P+G TGVSGSGKS+L+ Sbjct: 488 LNRANTLALPKE---INTNHCIVVRKAHAHNLQNISVEIPLGQLVSFTGVSGSGKSSLVF 544 Query: 652 DTLFPIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPV 711 DT+ ++ A I+G EH ++I +DQSPIGR RSN ATYT ++TP+ Sbjct: 545 DTIVKFSES--------GSAECDSIRGFEHVKEIITLDQSPIGRQSRSNIATYTDLYTPI 596 Query: 712 RELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRY 771 RELFA +P+++ P FSFNV+GGRCE CQG GVI + M FL D+ VPC C GKR+ Sbjct: 597 RELFAALPQAKKLRLKPSDFSFNVKGGRCEKCQGLGVIPLNMQFLDDVEVPCPVCIGKRF 656 Query: 772 NRETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLS 831 ++ L + YK I ++L+ T+ E FF +A +LQTL DVGL Y++LGQS TLS Sbjct: 657 KKKVLSVTYKDNNISDILEATVSENLTFFADNKEIAGRLQTLCDVGLDYLKLGQSTITLS 716 Query: 832 GGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHN 891 GGE QR+KL++E+ K G TLY+LDEPTTGLH DI +LL +L L + N++ VIEH Sbjct: 717 GGECQRIKLSKEMGKSNQGHTLYLLDEPTTGLHPLDIDRLLKLLRSLIARNNSVFVIEHA 776 Query: 892 LDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLKPML 940 L+VI +D+I+D+GPEGG GG ++ GTP+ +AE + S T ++LK + Sbjct: 777 LEVISQSDYIIDIGPEGGISGGRLVAHGTPQQIAENKNSLTGKYLKEFI 825 Score = 176 bits (446), Expect = 4e-42, Method: Composition-based stats. Identities = 62/131 (47%), Positives = 87/131 (66%), Gaps = 4/131 (3%) Query: 2 DKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYA 61 D IE++GA+ HNLKNI++ +P+ KLI +TG+SGSGKS+ A D L E +R+Y+ES+ Sbjct: 3 DYIEIKGAKEHNLKNISVSLPKYKLIALTGISGSGKSTFAMDILQKECRRQYMESMGLVT 62 Query: 62 RQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCP 121 + KP VD I GLSP+I+I Q+ S+NPRSTVGT TEI YLR+L+A++G C Sbjct: 63 ----DGLNKPLVDSITGLSPSIAIRQRVLSNNPRSTVGTYTEILTYLRILYAKLGVRSCT 118 Query: 122 DHDVPLAAQTV 132 + + Sbjct: 119 NCGKKIPPDYD 129 Score = 106 bits (264), Expect = 6e-21, Method: Composition-based stats. Identities = 50/170 (29%), Positives = 73/170 (42%), Gaps = 40/170 (23%) Query: 2 DKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYA 61 I VR A HNL+NI++ IP +L+ TG+SGSGKSSL FDT+ ++ ES SA Sbjct: 504 HCIVVRKAHAHNLQNISVEIPLGQLVSFTGVSGSGKSSLVFDTIV-----KFSESGSA-- 556 Query: 62 RQFLSLMEKPDVDHI---EGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEP 118 + D I E + I+++Q RS + T T+++ +R LFA + + Sbjct: 557 ----------ECDSIRGFEHVKEIITLDQSPIGRQSRSNIATYTDLYTPIRELFAALPQA 606 Query: 119 -----------------RCPDHDVPLAAQTVSQMVDNV---LSQPEGKRL 148 RC Q +D+V GKR Sbjct: 607 KKLRLKPSDFSFNVKGGRCEKCQGLGVIPLNMQFLDDVEVPCPVCIGKRF 656 Score = 86.2 bits (212), Expect = 5e-15, Method: Composition-based stats. Identities = 46/208 (22%), Positives = 81/208 (38%), Gaps = 36/208 (17%) Query: 609 PEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGAT-- 666 + +++ GA+ +NLK+++++LP +TG+SGSGKST D L +RQ + Sbjct: 1 MQDYIEIKGAKEHNLKNISVSLPKYKLIALTGISGSGKSTFAMDILQKECRRQYMESMGL 60 Query: 667 IAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPES----- 721 + + + + I I Q + PRS TYT + T +R L+A + Sbjct: 61 VTDGLNKPLVDSITGLSPSIAIRQRVLSNNPRSTVGTYTEILTYLRILYAKLGVRSCTNC 120 Query: 722 ----------------------------RARGYTPGRFSFNVRGGRCEACQGDGVI-KVE 752 + + G FSFN G C C G G++ ++ Sbjct: 121 GKKIPPDYDLDGESELDEATISCPHCQTKHQKLNMGHFSFNKPQGACPTCNGVGIVTTLD 180 Query: 753 MHFLPDIYVPCDQCKGKRYNRETLEIKY 780 + L D + + + + Y Sbjct: 181 LSQLIDEKLTIEGGAVSLWLDPVIRTHY 208 >UniRef50_B8FST5 ABC transporter related n=5 Tax=Firmicutes RepID=B8FST5_DESHD Length = 820 Score = 668 bits (1723), Expect = 0.0, Method: Composition-based stats. Identities = 264/705 (37%), Positives = 407/705 (57%), Gaps = 16/705 (2%) Query: 237 MDDPKAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQ 296 ++ + E F C CG+ M +L FS+N GACPTC GLG + D V+ Sbjct: 127 QEELEKREDEFKVYMYCNHCGHKMDKLTRTYFSYNTREGACPTCQGLGKILQVNKDNVV- 185 Query: 297 NPELSLAGGAIRGWDRR-NFYYFQMLKSLADHYKFDV--EAPWGSLSANVHKVVLYGSGK 353 N +LSL GA+ W+++ Y +L + HY + + P + ++ YG Sbjct: 186 NEKLSLEAGAVDFWEQKYKDYQISVLYNAFQHYGVPIEPDTPVREFTNVQKAILFYGVDS 245 Query: 354 ENIEFKYMNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGTR 413 + ++ + + + ++ FEG+ + RR E L+ + + + C C G R Sbjct: 246 DQVKEFFPDIQAPKTVGGGRFEGIYPVLWRRIAEKSGD--PRGLSAYFAEQICPDCAGER 303 Query: 414 LRREARHVYVENTPLPAISDMSIGHAMEFFNNLK--LAGQRAKIAEKILKEIGDRLKFLV 471 L +R V V T LP ++ +S+ ++ L+ + G + L ++ +++ ++ Sbjct: 304 LNGLSRSVTVLGTRLPELASLSLEELQDWLIKLEDSVTGTHQDLVASYLNDLKTKIRRII 363 Query: 472 NVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTL 531 VGL YL+L R TLSGGEAQRI+LA+ + + L G++Y++DEP+IGLH +D + ++ L Sbjct: 364 KVGLGYLSLDRQTMTLSGGEAQRIKLAATLDSTLTGIIYIMDEPTIGLHPQDTQGIIQIL 423 Query: 532 IHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQY 591 LRDLGNTVIV+EHD D + AAD ++DIGPGAG GGE+V +G ++ + S+TG Y Sbjct: 424 KELRDLGNTVIVIEHDMDVMSAADFIVDIGPGAGKLGGEIVGQGSIDELKEQGRSVTGLY 483 Query: 592 MSGKRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLIN 651 ++ + + + +++ NLK++ + PVG +TGVSGSGKSTL+ Sbjct: 484 LNRPVRE---ARSYRKGTGEFIEVQHGDLYNLKNINVRFPVGCLISVTGVSGSGKSTLVF 540 Query: 652 DTLFPIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPV 711 + L R +P + G E F+++I ++QSP+ R RSN ATY+GV+T + Sbjct: 541 EVLAKGKYRSQG-----DPMKRNHVAGTELFEQIITVEQSPVTRMKRSNVATYSGVYTEI 595 Query: 712 RELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRY 771 R++F + E+R +G TP FSFN RGGRCE C+G G + M F D+ V C C G ++ Sbjct: 596 RKIFGNLSEARRKGITPRHFSFNSRGGRCENCEGLGYVVSNMLFFEDLEVSCPVCHGDQF 655 Query: 772 NRETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLS 831 E L +KY+G +I +VL M++EEA F P + + L+ L +VGL Y+ LGQ+ TTLS Sbjct: 656 QDEVLSVKYQGHSIKDVLGMSVEEALAVFALHPRITKVLELLEEVGLGYLELGQTLTTLS 715 Query: 832 GGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHN 891 GGE QR+KLA+EL LY++DEPTTGLH D++ L +L+++ D G+T++V+EHN Sbjct: 716 GGEGQRLKLAKELIGNEGKTNLYLIDEPTTGLHPLDVENFLALLNRMVDAGSTVIVVEHN 775 Query: 892 LDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFL 936 V++ +DWI+DLGPEGG GG ++ GTPE + S T RFL Sbjct: 776 QQVMQASDWIIDLGPEGGHKGGRVMAVGTPEQIKSEPDSVTGRFL 820 Score = 166 bits (420), Expect = 5e-39, Method: Composition-based stats. Identities = 72/192 (37%), Positives = 109/192 (56%), Gaps = 17/192 (8%) Query: 763 CDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAVPA----------------L 806 C C G+R N + + G + E+ +++EE +++ + L Sbjct: 296 CPDCAGERLNGLSRSVTVLGTRLPELASLSLEELQDWLIKLEDSVTGTHQDLVASYLNDL 355 Query: 807 ARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFA 866 K++ ++ VGL Y+ L + TLSGGEAQR+KLA L TG +YI+DEPT GLH Sbjct: 356 KTKIRRIIKVGLGYLSLDRQTMTLSGGEAQRIKLAATLDSTLTG-IIYIMDEPTIGLHPQ 414 Query: 867 DIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAE 926 D Q ++ +L +LRD GNT++VIEH++DV+ AD+IVD+GP G GGEI+ G+ + + E Sbjct: 415 DTQGIIQILKELRDLGNTVIVIEHDMDVMSAADFIVDIGPGAGKLGGEIVGQGSIDELKE 474 Query: 927 CEASHTARFLKP 938 S T +L Sbjct: 475 QGRSVTGLYLNR 486 Score = 165 bits (419), Expect = 6e-39, Method: Composition-based stats. Identities = 54/138 (39%), Positives = 83/138 (60%), Gaps = 6/138 (4%) Query: 1 MDKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAY 60 M I + G R NLK+I+L +PR+KL++ TGLSGSGK++LA D LY E QR+Y+E++ Sbjct: 1 MADIFLHGVREGNLKDISLTLPRNKLVIFTGLSGSGKTTLAIDVLYQECQRQYLEAIG-- 58 Query: 61 ARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRC 120 + KP +D + SPA+ I Q NPRSTVGT+T I+ LR+++ ++ + C Sbjct: 59 ----YQGIHKPKLDELRNASPAVRITQNEYRKNPRSTVGTVTNIYTELRMIYEKLSQRTC 114 Query: 121 PDHDVPLAAQTVSQMVDN 138 P + A + ++ Sbjct: 115 PHCHRDIRADQCQEELEK 132 Score = 82.7 bits (203), Expect = 6e-14, Method: Composition-based stats. Identities = 48/172 (27%), Positives = 68/172 (39%), Gaps = 36/172 (20%) Query: 614 KLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAEPAPY 673 L G R NLKD++LTLP TG+SGSGK+TL D L+ QRQ A + Sbjct: 5 FLHGVREGNLKDISLTLPRNKLVIFTGLSGSGKTTLAIDVLYQECQRQYLEAIGYQGIHK 64 Query: 674 RDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPES------------ 721 + L + + I Q+ + PRS T T ++T +R ++ + + Sbjct: 65 PKLDELRNASPAVRITQNEYRKNPRSTVGTVTNIYTELRMIYEKLSQRTCPHCHRDIRAD 124 Query: 722 ------------------------RARGYTPGRFSFNVRGGRCEACQGDGVI 749 + T FS+N R G C CQG G I Sbjct: 125 QCQEELEKREDEFKVYMYCNHCGHKMDKLTRTYFSYNTREGACPTCQGLGKI 176 Score = 80.8 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 41/118 (34%), Positives = 61/118 (51%), Gaps = 11/118 (9%) Query: 2 DKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYA 61 + IEV+ +NLKNIN+ P LI VTG+SGSGKS+L F+ L A+G+ Sbjct: 500 EFIEVQHGDLYNLKNINVRFPVGCLISVTGVSGSGKSTLVFEVL-AKGKY---------- 548 Query: 62 RQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPR 119 R M++ V E I++EQ + RS V T + ++ +R +F + E R Sbjct: 549 RSQGDPMKRNHVAGTELFEQIITVEQSPVTRMKRSNVATYSGVYTEIRKIFGNLSEAR 606 >UniRef50_A8MGE0 Excinuclease ABC, A subunit n=1 Tax=Alkaliphilus oremlandii OhILAs RepID=A8MGE0_ALKOO Length = 799 Score = 667 bits (1722), Expect = 0.0, Method: Composition-based stats. Identities = 273/713 (38%), Positives = 429/713 (60%), Gaps = 15/713 (2%) Query: 231 TAVVADMDDPKAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFD 290 + V + D L + E FS+NNP C C G G + D Sbjct: 95 RSYVGTVTDISRFLRLLFSRVGVGKRNKFYTE---GDFSYNNPKVWCEMCRGTGEKYVLD 151 Query: 291 PDRVIQNPELSLAGGAIRGWDRRN-FYYFQMLKSLADHYKFDVEAPWGSLSANVHKVVLY 349 D++I N +L GAI W++ + +Y ++L+ + HY D+ P LS + + +L Sbjct: 152 YDKIIDNKNRTLKEGAISYWNQGSDNFYDKLLEKVCMHYDIDMNTPIKDLSDDKLEFLLN 211 Query: 350 GSGKENIEFKYMNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASC 409 G + +Y N + + + F+GV+ + + ++ ++ + + + K+I C C Sbjct: 212 GKSDSKFKVRYKNYKKNYRTKEVEFKGVIRELNEKLEDIDTPSTLKSIHKYIKKDKCDGC 271 Query: 410 EGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKL--AGQRAKIAEKILKEIGDRL 467 G RL+ E V + + ++ ++ ++ NL KI I +E+ R+ Sbjct: 272 NGDRLKDEMLEVKINGENISSLESKTVTDLKQWLVNLIQITDNTCKKIIYDICEEVIKRI 331 Query: 468 KFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERL 527 L + L YL+L+RS +LSGGE+QRIRLA+Q+ L ++YVLDEP++GLH D E + Sbjct: 332 TNLEKLQLGYLSLNRSIPSLSGGESQRIRLANQLACNLSSLLYVLDEPTMGLHSNDIENI 391 Query: 528 LGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESL 587 L L+ +GNT+++VEH+ D + +AD++ID+GPG G++GGE+V +G + I ESL Sbjct: 392 EIILKDLKQMGNTILLVEHNLDIMLSADYLIDMGPGGGIYGGEIVGKGSPDEIKNHDESL 451 Query: 588 TGQYMSGKRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKS 647 TG+Y+SG+ KI +P ++ + + + A+ NN+K +P+ +TGVSG+GKS Sbjct: 452 TGKYLSGELKINIPHRK--RDSNASILVKKAKYNNIKGEDFFIPLNNLVVVTGVSGAGKS 509 Query: 648 TLINDTLFPIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGV 707 TL ++ L P R+ N +I G+++ +KVI +DQ+PIGR+P+SN AT+TG+ Sbjct: 510 TLTDNILEPSLTRKKN-------INCEEIIGIQNINKVIKVDQTPIGRSPKSNVATFTGM 562 Query: 708 FTPVRELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCK 767 F +R+L++ +R R Y+ FSFN GGRCE+C+GDG +K++M F+ D YV CD+CK Sbjct: 563 FDFIRDLYSKTELARKRKYSKSEFSFNTPGGRCESCKGDGQVKIDMSFMADTYVVCDECK 622 Query: 768 GKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSA 827 GKRY ++ LEI Y GK I +VL+MT+ EA EFF +++ L+ L+DVGL YI+LGQ A Sbjct: 623 GKRYEKKILEINYNGKNISDVLNMTVLEAHEFFIENKSISSILKCLIDVGLEYIKLGQPA 682 Query: 828 TTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVV 887 TT+SGGEAQR+KLA+ LS LYILDEPT GLH DI +L+ +L+++ D+GN+IVV Sbjct: 683 TTISGGEAQRIKLAKYLSNDSATGNLYILDEPTVGLHLHDINKLIALLNEIVDRGNSIVV 742 Query: 888 IEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLKPML 940 +EHN+++IK AD+I+D+GP GG GG+I+ GTPE +A + + L+ ++ Sbjct: 743 VEHNMELIKCADYIIDIGPVGGPNGGKIIDCGTPEHIAANNKASVSNKLRKII 795 Score = 174 bits (442), Expect = 1e-41, Method: Composition-based stats. Identities = 65/117 (55%), Positives = 85/117 (72%) Query: 1 MDKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAY 60 MD I++ AR +NLK+I + IP +K+ VVTG+SGSGKSSL FDT+YAE +R ++ES+S Sbjct: 1 MDNIKIIRARENNLKDIEVEIPVNKITVVTGVSGSGKSSLVFDTIYAESERMFLESISIN 60 Query: 61 ARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGE 117 S + KPDV I L PAI+I QK T+ NPRS VGT+T+I +LRLLF+RVG Sbjct: 61 LESITSKLPKPDVYKISNLLPAIAISQKKTNRNPRSYVGTVTDISRFLRLLFSRVGV 117 Score = 93.9 bits (232), Expect = 3e-17, Method: Composition-based stats. Identities = 49/144 (34%), Positives = 68/144 (47%), Gaps = 7/144 (4%) Query: 615 LTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAEPAPYR 674 + AR NNLKD+ + +PV T +TGVSGSGKS+L+ DT++ ++R + Sbjct: 6 IIRARENNLKDIEVEIPVNKITVVTGVSGSGKSSLVFDTIYAESERMFLESISINLESIT 65 Query: 675 DIQGLEHFDKV------IDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESRARG-YT 727 K+ I I Q R PRS T T + +R LF+ V + YT Sbjct: 66 SKLPKPDVYKISNLLPAIAISQKKTNRNPRSYVGTVTDISRFLRLLFSRVGVGKRNKFYT 125 Query: 728 PGRFSFNVRGGRCEACQGDGVIKV 751 G FS+N CE C+G G V Sbjct: 126 EGDFSYNNPKVWCEMCRGTGEKYV 149 Score = 87.0 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 31/113 (27%), Positives = 59/113 (52%), Gaps = 13/113 (11%) Query: 3 KIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYAR 62 I V+ A+ +N+K + IP + L+VVTG+SG+GKS+L + L R+ Sbjct: 474 SILVKKAKYNNIKGEDFFIPLNNLVVVTGVSGAGKSTLTDNILEPSLTRK---------- 523 Query: 63 QFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARV 115 + ++ I+ ++ I ++Q +P+S V T T + D++R L+++ Sbjct: 524 ---KNINCEEIIGIQNINKVIKVDQTPIGRSPKSNVATFTGMFDFIRDLYSKT 573 >UniRef50_B1VG20 Excinuclease ABC, subunit A n=2 Tax=Actinomycetales RepID=B1VG20_CORU7 Length = 863 Score = 663 bits (1712), Expect = 0.0, Method: Composition-based stats. Identities = 242/758 (31%), Positives = 369/758 (48%), Gaps = 41/758 (5%) Query: 220 SFETALELSGGTAVVADMDDPKAEELLFSANFACPICGYS----MRELEPRLFSFNNPAG 275 + + + L G + V + + L + G L+ FS N AG Sbjct: 103 ALQQSTTLGGARSSVGTISNMSNSIRLLFSRSGSYPNGMRERLEYGRLDSDAFSPNTTAG 162 Query: 276 ACPTCDGLGVQQYFDPDRVIQNPELSLAGGAIRGWDRRNFYYFQMLKSLADHYKFDVEAP 335 CP C G G + ++ +P LS+ GAI W + + + + + ++ P Sbjct: 163 MCPECQGTGTVHRPTEESMVPDPSLSIWDGAIAAW--PGAWLGKNFRDILGTLGYPLDIP 220 Query: 336 WGSLSANVHKVVLYGSGKENIEFKYMNDRGDTS-IRRHPFEGVLHNMERRYKETESSAVR 394 W + +L+ + + + D + + + V + ETES R Sbjct: 221 WRDIPQTDRDWILFTDEQPVVTVHPVRDENAVNGSYKGKWRSVATYLTDTLAETESDKNR 280 Query: 395 EELAKFISNRPCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNL-------- 446 + F+ + C +C+G + + V + +D+++ + Sbjct: 281 RRVLSFMHSSTCPTCQGRGFQPDTLQVTYAGYAIDEFNDLALKDVLAVLEERLQYLAGIA 340 Query: 447 -KLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGL 505 + + + E +L ++ ++ + +GL +L+LSR A +LS GE QR+RLASQ+ + L Sbjct: 341 KQQWTEHDEAEELLLDQVLPTVRAAIKLGLGHLSLSRPARSLSAGEHQRLRLASQLNSSL 400 Query: 506 VGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAG 565 G YVLDEPS GLH + + + L GN+V++VEHD + D ++DIGP AG Sbjct: 401 FGTTYVLDEPSAGLHVVERKAVSELLQRFITAGNSVLLVEHDMSLVAGCDWIVDIGPRAG 460 Query: 566 VHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEVPKKRVPANPEKVLKLTGARGNNLKD 625 GG++V GP + A E L + + PA + + L+G Sbjct: 461 ERGGQLVFSGPTDQFRATAEQLGSPTAAALTEDFPELAASPAGTGQSIHLSGIHARAFDG 520 Query: 626 VTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQ-------------------LNGAT 666 + P+G T +TGVSGSGKSTL+ L + R G+ Sbjct: 521 ADVDFPLGALTAVTGVSGSGKSTLVIGVLADVVSRSAKQVIGADEVSDEDPDAELTAGSG 580 Query: 667 IAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESRARGY 726 G++ +++ I Q PIGRT RS ATYTG+F VR LFA PE++ RG Sbjct: 581 ANGDFRVESATGVDKIRRLVHITQKPIGRTVRSTVATYTGLFDHVRRLFAATPEAKQRGM 640 Query: 727 TPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKYKGKTIH 786 + FS+N GRC C G G I+VE+ FLP Y C C GKRY E LEI++ G++I Sbjct: 641 SVSDFSYNTTKGRCPECDGAGSIEVELVFLPGTYTTCPACHGKRYKPEILEIEWNGRSIA 700 Query: 787 EVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSK 846 ++L +T++EA E F P + R ++ L +GL Y+RLGQ + LSGGEAQR+KLA E+ + Sbjct: 701 DILALTVDEALEVFAEEPRILRSVEFLHALGLGYLRLGQGSPELSGGEAQRIKLASEMQR 760 Query: 847 -RGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADWIVDLG 905 G +LY+LDEPTTGLH AD+ LL L +L D G T+VV+EH+L V+ AD ++D+G Sbjct: 761 GSGHKHSLYLLDEPTTGLHPADVDLLLAQLRRLVDDGATVVVVEHDLRVVAQADHVIDVG 820 Query: 906 PEGGSGGGEILVSGTPETVAE-----CEASHTARFLKP 938 P G GG+IL +GTP VA+ S TA+ L Sbjct: 821 PGAGDEGGQILATGTPAAVAQQGVHPDSRSVTAQALAE 858 Score = 170 bits (431), Expect = 2e-40, Method: Composition-based stats. Identities = 86/313 (27%), Positives = 127/313 (40%), Gaps = 64/313 (20%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 63 I VR A HNLK+I++ +PRD L+ VTG+SGSGKSSLAF T++ E QRRY+ES+S +AR+ Sbjct: 23 IRVRDAHLHNLKHIDVDLPRDTLVAVTGVSGSGKSSLAFGTIHGEAQRRYLESVSPFARR 82 Query: 64 FLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGE------ 117 + P V + GL P ++++Q +T RS+VGTI+ + + +RLLF+R G Sbjct: 83 LIGGAVNPRVGSVTGLPPTVALQQSTTLGGARSSVGTISNMSNSIRLLFSRSGSYPNGMR 142 Query: 118 ----------------------PRCPDHDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPII 155 P C S + D LS +G A Sbjct: 143 ERLEYGRLDSDAFSPNTTAGMCPECQGTGTVHRPTEESMVPDPSLSIWDG------AIAA 196 Query: 156 KERKGEHTKTLENLASQGYIRARIDGEVCDLSDPPKL--ELQKKHTIEVVVDRFKVRDDL 213 + L + GY ++ L + Q T+ V D V Sbjct: 197 WPGAWLGKNFRDILGTLGYPLDIPWRDIPQTDRDWILFTDEQPVVTVHPVRDENAVNGSY 256 Query: 214 TQRLAESFETALELSGGTAVVADMDDPKAEELLFSANFACPICGYSMRELEPRLFSFNNP 273 + A L+ +A+ + K + S F ++ Sbjct: 257 KGKWRS---VATYLTD---TLAETESDKNRRRVLS-------------------FMHSST 291 Query: 274 AGACPTCDGLGVQ 286 CPTC G G Q Sbjct: 292 ---CPTCQGRGFQ 301 Score = 85.4 bits (210), Expect = 9e-15, Method: Composition-based stats. Identities = 45/169 (26%), Positives = 67/169 (39%), Gaps = 20/169 (11%) Query: 599 EVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIA 658 P A + ++++ A +NLK + + LP +TGVSGSGKS+L T+ A Sbjct: 9 PAPHTPERAGHDPMIRVRDAHLHNLKHIDVDLPRDTLVAVTGVSGSGKSSLAFGTIHGEA 68 Query: 659 QRQLNGATIAEPAPYRDIQGLEHFDKVIDID---------QSPIGRTPRSNPATYTGVFT 709 QR+ + R + G +V + QS RS+ T + + Sbjct: 69 QRRYLESVSPFA---RRLIGGAVNPRVGSVTGLPPTVALQQSTTLGGARSSVGTISNMSN 125 Query: 710 PVRELFAG---VPESRARGYTPGR-----FSFNVRGGRCEACQGDGVIK 750 +R LF+ P GR FS N G C CQG G + Sbjct: 126 SIRLLFSRSGSYPNGMRERLEYGRLDSDAFSPNTTAGMCPECQGTGTVH 174 Score = 83.1 bits (204), Expect = 5e-14, Method: Composition-based stats. Identities = 40/141 (28%), Positives = 54/141 (38%), Gaps = 35/141 (24%) Query: 3 KIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYAR 62 I + G ++ P L VTG+SGSGKS+L L + +S A+ Sbjct: 507 SIHLSGIHARAFDGADVDFPLGALTAVTGVSGSGKSTLVIGVLA--------DVVSRSAK 558 Query: 63 QFLS----LMEKPD--------------------VDHIEGLSPAISIEQKSTSHNPRSTV 98 Q + E PD VD I L + I QK RSTV Sbjct: 559 QVIGADEVSDEDPDAELTAGSGANGDFRVESATGVDKIRRL---VHITQKPIGRTVRSTV 615 Query: 99 GTITEIHDYLRLLFARVGEPR 119 T T + D++R LFA E + Sbjct: 616 ATYTGLFDHVRRLFAATPEAK 636 >UniRef50_C3PKK6 Excinuclease ABC, subunit A n=10 Tax=Actinomycetales RepID=C3PKK6_CORA7 Length = 793 Score = 655 bits (1690), Expect = 0.0, Method: Composition-based stats. Identities = 250/711 (35%), Positives = 366/711 (51%), Gaps = 36/711 (5%) Query: 233 VVADMDDPKAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPD 292 V + L + CG + L FS N P G CP C G GV Sbjct: 106 TVGTISAMSNSVRLLYSR-----CGDNPEGLYSDSFSPNTPEGMCPECQGTGVVHEPTEA 160 Query: 293 RVIQNPELSLAGGAIRGWDRRNFYYFQMLKSLADHYKFDVEAPWGSLSANVHKVVLYGSG 352 ++ +P LS+ GAI W + + + +D+++PW L + +L+ Sbjct: 161 SMVPDPSLSIEEGAIAAW--PGAWAGKNFHDILQELGYDLDSPWEDLPKKDREWILFTEE 218 Query: 353 KENIEFKYMNDRGD-TSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEG 411 + + K + V + + Y ET+S +R + F+ R C +C+G Sbjct: 219 RPVVTVKPRRGADQIQRNYEGTWRSVASYLTKTYAETKSDTLRARVLSFMETRRCDTCQG 278 Query: 412 TRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDRLKFLV 471 RL +A V P+ + + + A E N + Q + +LK + + + Sbjct: 279 RRLTAKALKVTYAGLPIDEFNALPLSEAYELLNG--QSPQPNDAEDLLLKALLPAFESAL 336 Query: 472 NVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTL 531 +GL +L+L R +TLSGGE QR+RLA+Q+ +GL GV YVLDEPS GLH + +L Sbjct: 337 ELGLGHLSLDRPTDTLSGGEVQRLRLAAQLRSGLYGVTYVLDEPSAGLHPVERGAVLDVC 396 Query: 532 IHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLE---AIMAVPESLT 588 GN+V++VEHD + ++ AD ++D+GP AG GG+VV GP+ ++ T Sbjct: 397 RRFIAEGNSVLLVEHDMELVKQADWLVDVGPLAGERGGQVVYSGPVADYIEAADSADTPT 456 Query: 589 GQYMSGKRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKST 648 + ++ R R L + + + + +G FT ITG+SGSGKST Sbjct: 457 ARALARPRPTPKADARPAHGEIP---LRQVHSHTIDGLDVDFGLGQFTAITGLSGSGKST 513 Query: 649 LINDTLFPIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVF 708 L+ L G E +V+ I Q PIGRTPRS ATYT +F Sbjct: 514 LL-----AALHDMLTGPVCP-----------EQVKRVVSITQKPIGRTPRSTVATYTNLF 557 Query: 709 TPVRELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKG 768 VR+LFA PE++ + +T RFS+NV+ +C C G G I+VE+ FLP Y C C+G Sbjct: 558 DNVRKLFAATPEAKKKKWTVSRFSYNVKQSQCHTCGGAGQIEVELVFLPGSYTQCPDCQG 617 Query: 769 KRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSAT 828 +RYN +TL I+++G+TI ++LD+T+EEA E F + LQTL VGL Y+RLGQ A Sbjct: 618 QRYNDDTLSIRWQGRTIADILDLTVEEALEVFADEAPILHALQTLEAVGLGYLRLGQGAP 677 Query: 829 TLSGGEAQRVKLARELSKRGT---GQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTI 885 LSGGEAQR+KLA EL + G T+Y+LDEPT GLH ADI L+ LH L D +++ Sbjct: 678 ELSGGEAQRIKLATELQRSRNSRRGHTVYLLDEPTVGLHPADIDLLITELHSLVDASHSV 737 Query: 886 VVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFL 936 VV +H+ +I AD ++++GP G GG+I+ GTP VA E + T R L Sbjct: 738 VVADHDRHLIAGADRVIEMGPGSGVEGGQIVADGTPAQVAAGE-TPTGRVL 787 Score = 162 bits (409), Expect = 7e-38, Method: Composition-based stats. Identities = 85/282 (30%), Positives = 128/282 (45%), Gaps = 43/282 (15%) Query: 3 KIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYAR 62 I VR A HNL+N+++ +PR +L+ VTG+SGSGKSSLAF T++ EGQRRY+ES++ +AR Sbjct: 12 TISVRDAHLHNLRNVDVDLPRGQLVAVTGVSGSGKSSLAFGTIHGEGQRRYLESVAPFAR 71 Query: 63 QFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGE----- 117 + ++ P V IEGL P ++++Q +++ + RSTVGTI+ + + +RLL++R G+ Sbjct: 72 RLIASAVDPQVGRIEGLPPTVALQQSASASSARSTVGTISAMSNSVRLLYSRCGDNPEGL 131 Query: 118 --------------PRCPDHDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHT 163 P C V S + D LS EG + P K H Sbjct: 132 YSDSFSPNTPEGMCPECQGTGVVHEPTEASMVPDPSLSIEEGA--IAAWPGAWAGKNFH- 188 Query: 164 KTLENLASQGYIRARIDGEVCDLSDP-PKLELQKKHTIEVVVDRFKVRDDLT---QRLAE 219 L+ L GY DL P L + + I +R V ++ Sbjct: 189 DILQEL---GY----------DLDSPWEDLPKKDREWILFTEERPVVTVKPRRGADQIQR 235 Query: 220 SFETALELSGGTAVVADM----DDPKAEELLFSANFACPICG 257 ++E D +A L F C C Sbjct: 236 NYEGTWRSVASYLTKTYAETKSDTLRARVLSFMETRRCDTCQ 277 Score = 88.9 bits (219), Expect = 9e-16, Method: Composition-based stats. Identities = 46/194 (23%), Positives = 76/194 (39%), Gaps = 14/194 (7%) Query: 605 VPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNG 664 + + A +NL++V + LP G +TGVSGSGKS+L T+ QR+ Sbjct: 5 QRRLAGMTISVRDAHLHNLRNVDVDLPRGQLVAVTGVSGSGKSSLAFGTIHGEGQRRYLE 64 Query: 665 ATIAEPAPYRDIQGLEHFDKV------IDIDQSPIGRTPRSNPATYTGVFTPVRELFAGV 718 + ++ + + QS + RS T + + VR L++ Sbjct: 65 SVAPFARRLIASAVDPQVGRIEGLPPTVALQQSASASSARSTVGTISAMSNSVRLLYSRC 124 Query: 719 PESRARGYTPGRFSFNVRGGRCEACQGDGVIK--VEMHFLPDIYVPCDQCKGKRYNRETL 776 + G FS N G C CQG GV+ E +PD + ++ + Sbjct: 125 GD-NPEGLYSDSFSPNTPEGMCPECQGTGVVHEPTEASMVPDPSLSIEEGAIAAWPG--- 180 Query: 777 EIKYKGKTIHEVLD 790 + GK H++L Sbjct: 181 --AWAGKNFHDILQ 192 Score = 75.4 bits (184), Expect = 1e-11, Method: Composition-based stats. Identities = 52/256 (20%), Positives = 88/256 (34%), Gaps = 44/256 (17%) Query: 3 KIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYAR 62 +I +R +H + +++ + +TGLSGSGKS+L A Sbjct: 477 EIPLRQVHSHTIDGLDVDFGLGQFTAITGLSGSGKSTLL-----------------AALH 519 Query: 63 QFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCPD 122 L+ P E + +SI QK PRSTV T T + D +R LFA E + Sbjct: 520 DMLTGPVCP-----EQVKRVVSITQKPIGRTPRSTVATYTNLFDNVRKLFAATPEAKKKK 574 Query: 123 HDVPLAAQTVSQMVDNVLSQPEGKRLMLLA------PIIKERKGEHTKTLENLASQGYIR 176 V + V Q + + L+ + + ++ QG Sbjct: 575 WTVSRFSYNVKQSQCHTCGGAGQIEVELVFLPGSYTQCPDCQGQRYNDDTLSIRWQG--- 631 Query: 177 ARIDGEVCDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVAD 236 ++D L+L + +EV D + L A L L G + Sbjct: 632 -------RTIADI--LDLTVEEALEVFADEAPILHALQTLEAVGLGY-LRLGQGA---PE 678 Query: 237 MDDPKAEELLFSANFA 252 + +A+ + + Sbjct: 679 LSGGEAQRIKLATELQ 694 >UniRef50_A1TP16 Excinuclease ABC, A subunit n=4 Tax=Bacteria RepID=A1TP16_ACIAC Length = 944 Score = 655 bits (1690), Expect = 0.0, Method: Composition-based stats. Identities = 283/814 (34%), Positives = 400/814 (49%), Gaps = 101/814 (12%) Query: 224 ALELSGG----TAVVADMDDPKAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPT 279 AL+ G + V + L + L FS N P GACP Sbjct: 129 ALQQQRGTPTARSSVGSATTISSLLRLLYSRAGQYPA--RQPMLYAEDFSPNTPEGACPH 186 Query: 280 CDGLGVQQYFDPDRVIQNPELSLAGGAIRGWDRRNFYYFQMLKSLADHYKFDVEAPWGSL 339 C G+G ++ + L++ A+ W + Q L+ + DV+ PW L Sbjct: 187 CHGMGRVYEVTERSLVPDDRLTIRERAVAAW--PTAWGGQNLRDILVMLGHDVDVPWRDL 244 Query: 340 SANVHKVVLYGSGKENIEF---------KYMNDRGDTSIRRHPFEGVLHNMERRYKETES 390 +L+ + + + G F ++ + ++S Sbjct: 245 PRKTRDWILFTDEQPVVPVYAGLDRKAAQAARKAGTPPSYMGTFSSARRHVLHSFAHSQS 304 Query: 391 SAVREELAKFISNRPCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNL---- 446 + +RE A F+ PC +C G RL+ EA V + + + +G + Sbjct: 305 ARMRERAAAFLVGSPCPACGGKRLKPEALSVTFAGHDIAELGRLPLGELARLLQPVAEGR 364 Query: 447 ------------------------------------------------KLAGQRAKIAEK 458 L+ ++ A++ Sbjct: 365 LGDSLRPSGGPRAPVARPGADSHRAHIARRVAAGGSAHAAAPDVRRTPDLSEEKVLAAQR 424 Query: 459 ILKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIG 518 + +EIG R+ L +GL+YLTL RS +LS GE QR+RLA+Q+G+ L GV+YVLDEPS G Sbjct: 425 LAQEIGARIAALSQLGLHYLTLDRSTPSLSSGELQRLRLATQLGSQLFGVVYVLDEPSAG 484 Query: 519 LHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLE 578 LH D E L L L+ GN++ VVEHD +RAAD ++D+GPGAG+HGGEV+ GP + Sbjct: 485 LHPADGEALRAALHRLKRAGNSLFVVEHDLATMRAADWLVDVGPGAGMHGGEVLYSGPPD 544 Query: 579 AIMAVPESLTGQYMSGKRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCI 638 + AV S T +Y+ R P +R P L+L G +NLK V PVG T + Sbjct: 545 GLAAVQPSRTRRYLFPGRDGPAPVQRTPREAAGWLRLEGIGRHNLKGVDAAFPVGCLTAV 604 Query: 639 TGVSGSGKSTLINDTL---------FPIAQRQLNGATIAEPAPYRDIQGLEH-------- 681 TGVSGSGKS+L++ L P+A + + ++ + +P Sbjct: 605 TGVSGSGKSSLVSRALVELVAQALGSPLADAREDEESVPDGSPGGPPHAAPQDDDPGAAD 664 Query: 682 ---------------FDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESRARGY 726 +++ +DQ PIGRTPRSN ATYTG+F VR+LFA P +R R Y Sbjct: 665 DPGGATSGRIAELAGIRRLVRVDQKPIGRTPRSNLATYTGLFDGVRKLFAATPAARRRRY 724 Query: 727 TPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKYKGKTIH 786 PGRFSFNV GRC C+G+G + VE+ FLP +Y PC C G RYN TLE+++ G I Sbjct: 725 GPGRFSFNVAAGRCPTCEGEGSVSVELLFLPSVYAPCPDCHGARYNPATLEVRWNGLDIA 784 Query: 787 EVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSK 846 +VL +T++ A E F A+ R L L ++GL Y+RLGQ AT LSGGEAQR+KLA EL + Sbjct: 785 DVLRLTVDAACEAFAREAAVLRPLALLREIGLGYLRLGQPATELSGGEAQRIKLATELQR 844 Query: 847 RGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADWIVDLGP 906 G TLY+LDEPTTGLH AD+ +LL L L GNT+VV+EH++ V+ DW++D+GP Sbjct: 845 PQRGDTLYVLDEPTTGLHPADVDRLLVQLDGLAAAGNTVVVVEHDMRVVAACDWVIDMGP 904 Query: 907 EGGSGGGEILVSGTPETVAECEASHTARFLKPML 940 G GG I+ +GTP VA S TA +L L Sbjct: 905 GAGGDGGRIVAAGTPSEVARQAGSRTAPYLARAL 938 Score = 174 bits (441), Expect = 1e-41, Method: Composition-based stats. Identities = 62/114 (54%), Positives = 87/114 (76%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 63 + VRGAR HNL+N+++ IPRD L+V TG+SGSGKSSLAF TLYAE QRRY+ES++ YAR+ Sbjct: 49 VRVRGAREHNLRNVDVDIPRDALVVFTGVSGSGKSSLAFGTLYAEAQRRYLESVAPYARR 108 Query: 64 FLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGE 117 + P+VD I+GL PA++++Q+ + RS+VG+ T I LRLL++R G+ Sbjct: 109 LIDQAGTPEVDAIDGLPPAVALQQQRGTPTARSSVGSATTISSLLRLLYSRAGQ 162 Score = 91.6 bits (226), Expect = 1e-16, Method: Composition-based stats. Identities = 47/192 (24%), Positives = 81/192 (42%), Gaps = 11/192 (5%) Query: 608 NPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATI 667 + + +++ GAR +NL++V + +P TGVSGSGKS+L TL+ AQR+ + Sbjct: 44 SIDGFVRVRGAREHNLRNVDVDIPRDALVVFTGVSGSGKSSLAFGTLYAEAQRRYLESVA 103 Query: 668 AEPAPYRDIQGLEHFDKV------IDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPE- 720 D G D + + + Q T RS+ + T + + +R L++ + Sbjct: 104 PYARRLIDQAGTPEVDAIDGLPPAVALQQQRGTPTARSSVGSATTISSLLRLLYSRAGQY 163 Query: 721 -SRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIK 779 +R FS N G C C G G + VP D+ + Sbjct: 164 PARQPMLYAEDFSPNTPEGACPHCHGMGRVY---EVTERSLVPDDRLTIRERAVAAWPTA 220 Query: 780 YKGKTIHEVLDM 791 + G+ + ++L M Sbjct: 221 WGGQNLRDILVM 232 Score = 69.2 bits (168), Expect = 7e-10, Method: Composition-based stats. Identities = 44/213 (20%), Positives = 66/213 (30%), Gaps = 49/213 (23%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 63 + + G HNLK ++ P L VTG+SGSGKSSL L + S A Sbjct: 579 LRLEGIGRHNLKGVDAAFPVGCLTAVTGVSGSGKSSLVSRALVELVAQALG---SPLADA 635 Query: 64 FLSLMEKPD-----------------------------VDHIEGLSPAISIEQKSTSHNP 94 PD + + G+ + ++QK P Sbjct: 636 REDEESVPDGSPGGPPHAAPQDDDPGAADDPGGATSGRIAELAGIRRLVRVDQKPIGRTP 695 Query: 95 RSTVGTITEIHDYLRLLFA-----------------RVGEPRCPDHDVPLAAQTVSQMVD 137 RS + T T + D +R LFA V RCP + + + Sbjct: 696 RSNLATYTGLFDGVRKLFAATPAARRRRYGPGRFSFNVAAGRCPTCEGEGSVSVELLFLP 755 Query: 138 NVLSQPEGKRLMLLAPIIKERKGEHTKTLENLA 170 +V + P E + + L Sbjct: 756 SVYAPCPDCHGARYNPATLEVRWNGLDIADVLR 788 >UniRef50_C8VVR7 ABC transporter related n=1 Tax=Desulfotomaculum acetoxidans DSM 771 RepID=C8VVR7_DESAS Length = 823 Score = 651 bits (1680), Expect = 0.0, Method: Composition-based stats. Identities = 271/706 (38%), Positives = 407/706 (57%), Gaps = 19/706 (2%) Query: 238 DDPKAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQN 297 ++ + + F C CGY M +L FS N GAC TC+GLG + + + N Sbjct: 128 EEVEKTDEDFKVFMYCSQCGYRMEKLTRTYFSCNTREGACTTCEGLGKVLDINKEN-VAN 186 Query: 298 PELSLAGGAIRGWDRR-NFYYFQMLKSLADHYKFDVE--APWGSLSANVHKVVLYGSGKE 354 LSL GAI W+++ Y L + HY P S ++ G E Sbjct: 187 ESLSLEDGAIDFWEQKYKEYQISSLYNAFRHYGIPFNDNTPVADFSNIQKAILYQGVESE 246 Query: 355 NIEFKYMNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGTRL 414 ++ + ++ FEGV + RR + A ++L + + C C G RL Sbjct: 247 EVKKAFSGILPPKTVAGGRFEGVFPTLWRRMSDKGGEA--KQLNDYFNYDICPDCRGERL 304 Query: 415 RREARHVYVENTPLPAISDMSIGHAMEFFNNLK--LAGQRAKIAEKILKEIGDRLKFLVN 472 +R V VE+T LP +S +S+ + L+ L Q K+ E L ++ +++ ++N Sbjct: 305 GALSRSVTVESTRLPELSLLSLEELYTWIQKLEDSLTDQNYKLVEPYLMDLKTKIQRILN 364 Query: 473 VGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLI 532 VGL YL+L R TLSGGE QR++LA+ + + L G++Y++DEP+IGLH +D E ++ L Sbjct: 365 VGLGYLSLDRQTITLSGGELQRVKLAATLDSDLTGIIYIMDEPTIGLHPKDTEGMITILK 424 Query: 533 HLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYM 592 LRDLGNTVIV+EHD D ++AAD+++DIGPG+G HGGE++ G L+ + S+TG Y+ Sbjct: 425 KLRDLGNTVIVIEHDPDIMQAADYIVDIGPGSGKHGGEIIGTGTLDELKEQEASVTGTYL 484 Query: 593 SGKRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLIND 652 +++ +K +K+ A NLK++ ++ P+G +TGVSGSGKSTL+ + Sbjct: 485 RKEKQD---RKEFRKGTGNAIKVENANLYNLKNIGVSFPIGCLNTVTGVSGSGKSTLVFE 541 Query: 653 TLFPIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVR 712 L ++ + I G+E FD+++ I+QS I + RSN ATY+ V+T VR Sbjct: 542 VLAEARNKKQTSRNV--------ISGMEQFDQIVTIEQSAITKMKRSNIATYSEVYTEVR 593 Query: 713 ELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYN 772 ++F + E++ RG + FSFN GGRCE C+G G + M F DI V C C GK+++ Sbjct: 594 KIFGSLKEAKDRGLSAKHFSFNTPGGRCENCEGLGYVTSNMLFFKDIEVTCPVCGGKQFS 653 Query: 773 RETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSG 832 + L +KYK +I ++L M++EEA F P + R L+ L DVGL Y+ LGQS TTLSG Sbjct: 654 DDVLSVKYKDCSIKDILQMSVEEAFSMFHNHPKIERILKLLEDVGLGYLELGQSLTTLSG 713 Query: 833 GEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNL 892 GE QR+KLA+EL +LY++DEPTTGLH D++ L +L+++ D GNT++V+EHN Sbjct: 714 GEGQRLKLAKELINNNGKHSLYLMDEPTTGLHPIDVENFLTLLNRMVDSGNTVIVVEHNQ 773 Query: 893 DVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLKP 938 VIK +DWI DLGPEGG GG+++ +GTP + + TA FL+ Sbjct: 774 QVIKASDWITDLGPEGGINGGKLVFAGTPSEMLINGETITAEFLRK 819 Score = 179 bits (454), Expect = 5e-43, Method: Composition-based stats. Identities = 62/141 (43%), Positives = 92/141 (65%), Gaps = 6/141 (4%) Query: 1 MDKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAY 60 M I VRGAR NLK+I+L IPR+KLIV TGLSGSGK++LA D ++ E QR+Y+E++ Sbjct: 1 MSNIIVRGAREGNLKDISLEIPREKLIVFTGLSGSGKTTLAIDVIFQECQRQYLEAMG-- 58 Query: 61 ARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRC 120 L + KP +D I +SPA+ I Q ++ NPRSTVGT+T+I+ LR+++ ++G C Sbjct: 59 ----LQGINKPKIDFIHNVSPAVIITQNESNKNPRSTVGTLTDIYTDLRMVYEKLGVRVC 114 Query: 121 PDHDVPLAAQTVSQMVDNVLS 141 P + ++A + V+ Sbjct: 115 PKCNKVISAAECKEEVEKTDE 135 Score = 83.9 bits (206), Expect = 3e-14, Method: Composition-based stats. Identities = 41/121 (33%), Positives = 63/121 (52%), Gaps = 14/121 (11%) Query: 2 DKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYA 61 + I+V A +NLKNI + P L VTG+SGSGKS+L F+ L AE + + S Sbjct: 500 NAIKVENANLYNLKNIGVSFPIGCLNTVTGVSGSGKSTLVFEVL-AEARNKKQTS----- 553 Query: 62 RQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCP 121 R +S ME D I ++IEQ + + RS + T +E++ +R +F + E + Sbjct: 554 RNVISGME--QFDQI------VTIEQSAITKMKRSNIATYSEVYTEVRKIFGSLKEAKDR 605 Query: 122 D 122 Sbjct: 606 G 606 Score = 80.0 bits (196), Expect = 4e-13, Method: Composition-based stats. Identities = 45/171 (26%), Positives = 66/171 (38%), Gaps = 36/171 (21%) Query: 615 LTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAEPAPYR 674 + GAR NLKD++L +P TG+SGSGK+TL D +F QRQ A + Sbjct: 6 VRGAREGNLKDISLEIPREKLIVFTGLSGSGKTTLAIDVIFQECQRQYLEAMGLQGINKP 65 Query: 675 DIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPES------------- 721 I + + + I Q+ + PRS T T ++T +R ++ + Sbjct: 66 KIDFIHNVSPAVIITQNESNKNPRSTVGTLTDIYTDLRMVYEKLGVRVCPKCNKVISAAE 125 Query: 722 -----------------------RARGYTPGRFSFNVRGGRCEACQGDGVI 749 R T FS N R G C C+G G + Sbjct: 126 CKEEVEKTDEDFKVFMYCSQCGYRMEKLTRTYFSCNTREGACTTCEGLGKV 176 >UniRef50_Q5WJS0 Excinuclease ABC subunit A n=38 Tax=cellular organisms RepID=Q5WJS0_BACSK Length = 751 Score = 645 bits (1665), Expect = 0.0, Method: Composition-based stats. Identities = 285/799 (35%), Positives = 416/799 (52%), Gaps = 90/799 (11%) Query: 143 PEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARIDGEVCDLSDPPKLELQKKHTIEV 202 GK ++ I E + R P + + ++ V Sbjct: 39 GSGKSSIVFDTIAAESTRLLNENFSMFVRSFLPRV----------PQPDTDAIENLSMAV 88 Query: 203 VVDRFKVRDDLTQRLAESFETALELSGGTAVVADMDDPKAEELLFSANFACPICGYSMRE 262 +VD+ ++ G + + + D L + P G Sbjct: 89 IVDQKRLG-----------------GGSHSTMGTITDISPILRLLFSRAGQPYVG----- 126 Query: 263 LEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPELSLAGGAIRGWDRRNFYYFQMLK 322 E +FSFN+P G CP C+G+G + D D+ + + SL GAI+ D + + L Sbjct: 127 -ESNMFSFNDPQGMCPECNGIGRKLNVDMDKAV-DLSKSLNEGAIKLPDYKVDGWDWSL- 183 Query: 323 SLADHYKFDVEAPWGSLSANVHKVVLYGSGKENIEFKYMNDRGDTSIRRHPFEGVLHNME 382 + FD + S + +LY S + ++ + EGV+ Sbjct: 184 -VVQAGPFDPDKKLSHYSDEELEKLLY-SKAKKVKMDFAGKA-----TNVTVEGVIEKFT 236 Query: 383 RRY----KETESSAVREELAKFISNRPCASCEGTRLRREARHVYVENTPLPAISDMSIGH 438 +Y +T+S ++ +A FI+ C++C G+RL + A + + +S M +G Sbjct: 237 NKYIKQDLKTKSERTQKAVAPFITEGTCSTCHGSRLSQAALSCKMNGFNIAEMSSMEVGQ 296 Query: 439 AMEFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLA 498 + + + + +A I+K + +RL+ LV++GL+YLTL R +TLSGGE+QR+++ Sbjct: 297 LIRIIHEVDI-----AVAAPIVKSLSERLQHLVDIGLDYLTLDRETDTLSGGESQRVKMV 351 Query: 499 SQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVI 558 + LV V Y+ DEPS+GLH RD RL L LRD GNTVIVVEHD D I+ ADH++ Sbjct: 352 KHLSGSLVDVTYIFDEPSVGLHPRDVHRLNELLQKLRDKGNTVIVVEHDPDVIKVADHIV 411 Query: 559 DIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEVPKKRVPANPEKVLKLTGA 618 D+GP AG HGG +V EG + ++ +LTG +M ++ K P L + A Sbjct: 412 DVGPHAGSHGGTIVYEGSFQGLLES-GTLTGTHMKRPLEL----KHDTRQPSGKLSIKNA 466 Query: 619 RGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAEPAPYRDIQG 678 +NL+DV +T+P G+ T +TGV+GSGKSTLIND Sbjct: 467 TLHNLQDVNVTIPTGVLTVVTGVAGSGKSTLINDVFLS---------------------- 504 Query: 679 LEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESRARGYTPGRFSFNVRGG 738 I IDQS +G + RSNPATYTG+ VR+ FA G FSFN +G Sbjct: 505 --QNPGAIVIDQSAVGVSTRSNPATYTGIMDDVRKAFASA-----NKVNKGLFSFNSKGA 557 Query: 739 RCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEARE 798 CE CQG GV+ ++ FL + +PC+ C+G+R+ E L K GK+I EVL+MT+E A E Sbjct: 558 -CENCQGLGVVYTDLAFLESVKLPCEVCRGRRFKEEVLAYKLNGKSIAEVLEMTVERALE 616 Query: 799 FFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDE 858 FF + RKLQ + DVGL YI LGQ +TLSGGE QR+KLA EL K+G+ +Y++DE Sbjct: 617 FF-EQKEIVRKLQAMSDVGLDYITLGQPLSTLSGGECQRIKLASELHKQGS---IYVMDE 672 Query: 859 PTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVS 918 PTTGLH +DI LL ++++L D GNT++VIEHNLDVI ADWI+D+GP+GGS GGE++ Sbjct: 673 PTTGLHMSDIGLLLTIMNRLVDAGNTVIVIEHNLDVISQADWIIDMGPDGGSNGGEVVFE 732 Query: 919 GTPETVAECEASHTARFLK 937 GTP + E S T ++L Sbjct: 733 GTPSQIIHAEQSITGKYLA 751 Score = 178 bits (451), Expect = 1e-42, Method: Composition-based stats. Identities = 65/183 (35%), Positives = 97/183 (53%), Gaps = 20/183 (10%) Query: 2 DKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYA 61 + I + GAR +NL+N++L IP+ K+ + TG+SGSGKSS+ FDT+ AE R E+ S + Sbjct: 7 EYIVISGARENNLQNVSLRIPKRKITIFTGVSGSGKSSIVFDTIAAESTRLLNENFSMFV 66 Query: 62 RQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPR-- 119 R FL + +PD D IE LS A+ ++QK ST+GTIT+I LRLLF+R G+P Sbjct: 67 RSFLPRVPQPDTDAIENLSMAVIVDQKRLGGGSHSTMGTITDISPILRLLFSRAGQPYVG 126 Query: 120 -------------CPDHDVPLAAQ--TVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTK 164 CP+ + + + VD S EG + P K + + Sbjct: 127 ESNMFSFNDPQGMCPECNGIGRKLNVDMDKAVDLSKSLNEGA---IKLPDYKVDGWDWSL 183 Query: 165 TLE 167 ++ Sbjct: 184 VVQ 186 Score = 166 bits (420), Expect = 4e-39, Method: Composition-based stats. Identities = 75/188 (39%), Positives = 107/188 (56%), Gaps = 11/188 (5%) Query: 762 PCDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAV---------PALARKLQT 812 C C G R ++ L K G I E+ M + + V +L+ +LQ Sbjct: 263 TCSTCHGSRLSQAALSCKMNGFNIAEMSSMEVGQLIRIIHEVDIAVAAPIVKSLSERLQH 322 Query: 813 LMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLL 872 L+D+GL Y+ L + TLSGGE+QRVK+ + LS T YI DEP+ GLH D+ +L Sbjct: 323 LVDIGLDYLTLDRETDTLSGGESQRVKMVKHLSGSLVDVT-YIFDEPSVGLHPRDVHRLN 381 Query: 873 DVLHKLRDQGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHT 932 ++L KLRD+GNT++V+EH+ DVIK AD IVD+GP GS GG I+ G+ + + E + T Sbjct: 382 ELLQKLRDKGNTVIVVEHDPDVIKVADHIVDVGPHAGSHGGTIVYEGSFQGLLES-GTLT 440 Query: 933 ARFLKPML 940 +K L Sbjct: 441 GTHMKRPL 448 Score = 91.6 bits (226), Expect = 1e-16, Method: Composition-based stats. Identities = 47/156 (30%), Positives = 73/156 (46%), Gaps = 9/156 (5%) Query: 605 VPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNG 664 + + + + ++GAR NNL++V+L +P T TGVSGSGKS+++ DT+ + R LN Sbjct: 1 MSESNREYIVISGARENNLQNVSLRIPKRKITIFTGVSGSGKSSIVFDTIAAESTRLLNE 60 Query: 665 ------ATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGV 718 + P D +E+ + +DQ +G S T T + +R LF+ Sbjct: 61 NFSMFVRSFLPRVPQPDTDAIENLSMAVIVDQKRLGGGSHSTMGTITDISPILRLLFSRA 120 Query: 719 PESRARGYTPGRFSFNVRGGRCEACQGDGVIK-VEM 753 + FSFN G C C G G V+M Sbjct: 121 GQPYVGE--SNMFSFNDPQGMCPECNGIGRKLNVDM 154 Score = 84.7 bits (208), Expect = 2e-14, Method: Composition-based stats. Identities = 44/180 (24%), Positives = 66/180 (36%), Gaps = 44/180 (24%) Query: 3 KIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYAR 62 K+ ++ A HNL+++N+ IP L VVTG++GSGKS+L D Sbjct: 460 KLSIKNATLHNLQDVNVTIPTGVLTVVTGVAGSGKSTLINDV------------------ 501 Query: 63 QFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRL-----------L 111 FLS AI I+Q + + RS T T I D +R L Sbjct: 502 -FLSQN-----------PGAIVIDQSAVGVSTRSNPATYTGIMDDVRKAFASANKVNKGL 549 Query: 112 FARVGEPRCPDHDVPLAAQTVSQMVDNV---LSQPEGKRLMLLAPIIKERKGEHTKTLEN 168 F+ + C + T +++V G+R K + LE Sbjct: 550 FSFNSKGACENCQGLGVVYTDLAFLESVKLPCEVCRGRRFKEEVLAYKLNGKSIAEVLEM 609 >UniRef50_B1KRA3 ABC transporter related n=1 Tax=Shewanella woodyi ATCC 51908 RepID=B1KRA3_SHEWM Length = 818 Score = 642 bits (1656), Expect = 0.0, Method: Composition-based stats. Identities = 267/738 (36%), Positives = 394/738 (53%), Gaps = 40/738 (5%) Query: 226 ELSGGTAVVADMDDPKAEELLFSAN----------------FACPICGYSMRELEPRLFS 269 L+ + + + L A+ C CG L + FS Sbjct: 91 RLANPRSTIGTVTGIDGLIRLLFAHAGKPSCPACFQELNSELFCDDCGLYGETLSAKQFS 150 Query: 270 FNNPAGACPTCDGLGVQQYFDPDRVIQNPELSLAGGAIRGWDRRNFYYF------QMLKS 323 N G C C+GLG F D +I + SL WD F + ++ Sbjct: 151 PNRKEGKCLQCNGLGKLASFSVDLIIPDKTKSLN----WIWDNAEPNTFSLPNLRKAFEA 206 Query: 324 LADHYKFDVEAPWGSLSANVHKVVLYGSGKENIEFKYMNDRGDTSIRRHPFEGVLHNMER 383 + D++ P+ SLS + LYG+ K + F G++ E Sbjct: 207 MCADEGIDIDCPYSSLSDEAKQRALYGTD------KGYTIKVGKVTNDIVFTGIIGYQEY 260 Query: 384 RYKETESSAVREELAKFISNRPCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFF 443 YK+T S ++ ++I + C C+G RLR E+ V V M+IG + Sbjct: 261 SYKKTTSVTRQKAFERYIGEQHCPGCDGARLRPESLAVKVVGKNFNDCQCMAIGDMTYWL 320 Query: 444 NNLKLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGA 503 +++ G ++ I ++ +VNVGL YL L+R + +LSGGE QRI LA + + Sbjct: 321 SSMIQDGTLPVGVHELANAIINQGHNIVNVGLGYLCLNRESASLSGGELQRILLAQHVAS 380 Query: 504 GLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPG 563 L GVMYVLDEP+IGLH+ D +LL ++ LRDLGN+++V+EHDE IRAAD +I+IGPG Sbjct: 381 DLSGVMYVLDEPTIGLHEEDTLKLLDSMRQLRDLGNSLVVIEHDETIIRAADWIIEIGPG 440 Query: 564 AGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEVPKKRVPANPEKVLKLTGARGNNL 623 AG GGEV+ +G E ++ S T ++ + K+ ++ + NNL Sbjct: 441 AGSKGGEVIFQGSYEELIDCQASATAKFFRSRDKLSS----HIPPMKEWFTINDLHRNNL 496 Query: 624 KDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAEPAPYRDIQGLEHFD 683 K T++ PV TC+TGVSGSGKS+L++ ++L GA ++QG+E F+ Sbjct: 497 KIDTVSFPVNALTCVTGVSGSGKSSLVSSIYDEA--QRLIGARAKRKELQSNLQGVEVFN 554 Query: 684 KVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESRARGYTPGRFSFNVRGGRCEAC 743 +I ++Q PIGR+ RS ATY G+ +R++FA ++ A GY FS NV GGRCEAC Sbjct: 555 DIIYVEQKPIGRSSRSTIATYLGISDDIRDMFAESNDAIAAGYERKHFSSNVAGGRCEAC 614 Query: 744 QGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFF--D 801 +G G I+++M + V C++C GK++ + L+IK K I++VL+MT++E F D Sbjct: 615 KGQGYIELDMSIFKNEEVLCEECDGKKFQPQILDIKVHNKNIYDVLNMTVDELVLHFSVD 674 Query: 802 AVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTT 861 A P++ R L L + GL Y+ LG + TTLSGGEAQR+ LA +L K +L+I DEPT Sbjct: 675 AYPSIHRALSCLAEFGLGYLVLGSATTTLSGGEAQRLNLATKLLKTKLQSSLFIFDEPTR 734 Query: 862 GLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTP 921 GLHF+DI+ LL + +L G+T+++IEHNLDVI + WIVD+GPEGG GGEI+ G Sbjct: 735 GLHFSDIRYLLALFDRLLSDGHTVLLIEHNLDVICQSHWIVDVGPEGGDKGGEIVFEGGI 794 Query: 922 ETVAECEASHTARFLKPM 939 +T+ S TA +K Sbjct: 795 DTMLCSSDSLTAIHVKRH 812 Score = 148 bits (374), Expect = 1e-33, Method: Composition-based stats. Identities = 53/128 (41%), Positives = 81/128 (63%), Gaps = 3/128 (2%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 63 I ++G THNLK+I++ IP++K++VVTG+SGSGKSSL DTL+ + Y+ +LS+ + Sbjct: 6 ITMQGVNTHNLKDIDISIPKNKMVVVTGVSGSGKSSLIIDTLFEYSKSLYIGALSS--KS 63 Query: 64 FLSLMEKPDVDHIEGLSPAISIEQKSTS-HNPRSTVGTITEIHDYLRLLFARVGEPRCPD 122 F V+ + G P ++++Q NPRST+GT+T I +RLLFA G+P CP Sbjct: 64 FDMGEGSYQVERVSGTQPPVALKQSVKRLANPRSTIGTVTGIDGLIRLLFAHAGKPSCPA 123 Query: 123 HDVPLAAQ 130 L ++ Sbjct: 124 CFQELNSE 131 Score = 86.2 bits (212), Expect = 5e-15, Method: Composition-based stats. Identities = 40/168 (23%), Positives = 66/168 (39%), Gaps = 28/168 (16%) Query: 2 DKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYA 61 + + +NLK + P + L VTG+SGSGKSSL ++Y E QR + A A Sbjct: 484 EWFTINDLHRNNLKIDTVSFPVNALTCVTGVSGSGKSSLV-SSIYDEAQR----LIGARA 538 Query: 62 RQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEP--- 118 ++ V+ + I +EQK + RST+ T I D +R +FA + Sbjct: 539 KRKELQSNLQGVEVFNDI---IYVEQKPIGRSSRSTIATYLGISDDIRDMFAESNDAIAA 595 Query: 119 --------------RCPDHDVPLAAQTVSQMV---DNVLSQPEGKRLM 149 RC + + + + + +GK+ Sbjct: 596 GYERKHFSSNVAGGRCEACKGQGYIELDMSIFKNEEVLCEECDGKKFQ 643 Score = 81.6 bits (200), Expect = 2e-13, Method: Composition-based stats. Identities = 59/239 (24%), Positives = 94/239 (39%), Gaps = 21/239 (8%) Query: 609 PEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIA 668 + + G +NLKD+ +++P +TGVSGSGKS+LI DTLF ++ GA + Sbjct: 2 MSTAITMQGVNTHNLKDIDISIPKNKMVVVTGVSGSGKSSLIIDTLFEYSKSLYIGALSS 61 Query: 669 EPAPYRDIQGLEHFDKVIDIDQSPIG--------RTPRSNPATYTGVFTPVRELFAGVPE 720 + + +G ++V Q P+ PRS T TG+ +R LFA Sbjct: 62 KS--FDMGEGSYQVERVSG-TQPPVALKQSVKRLANPRSTIGTVTGIDGLIRLLFAHAG- 117 Query: 721 SRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDI-YVPCDQCKGKR-YNRETLEI 778 + P F C+ C G F P+ C QC G ++++ Sbjct: 118 ---KPSCPACFQELNSELFCDDCGLYGETLSAKQFSPNRKEGKCLQCNGLGKLASFSVDL 174 Query: 779 KYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQR 837 KT E F ++P L + + + I + ++LS QR Sbjct: 175 IIPDKTKSLNWIWDNAEPNTF--SLPNLRKAFEAMCA--DEGIDIDCPYSSLSDEAKQR 229 >UniRef50_Q041B5 Excinuclease ATPase subunit n=53 Tax=Lactobacillaceae RepID=Q041B5_LACGA Length = 846 Score = 638 bits (1645), Expect = 0.0, Method: Composition-based stats. Identities = 244/748 (32%), Positives = 400/748 (53%), Gaps = 17/748 (2%) Query: 195 QKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVADMDDPKAEELLFSANFACP 254 ++ T+ + + F + + RL + +A+ EE+ C Sbjct: 107 SERATVGTMSETFNILRLIFSRLGSPVCPNGHRLKPSLEIAEAMAKSGEEM---GQLTCL 163 Query: 255 ICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPELSLAGGAIRGWDRRN 314 +CG F+FN+ GAC C G G + D ++I +P LS+ GA+ W Sbjct: 164 VCGVKFYAPSAEQFAFNS-DGACEECGGTGKVRQLDDSKLIADPRLSIKDGAVASWSLPG 222 Query: 315 FYYFQMLKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKENIEFKYMNDRGDTSIR-RHP 373 + ++A+H ++ P+ L+ VL G ++ + +++ G Sbjct: 223 ---RNFMPNVAEHAGVRIDIPYKDLTDKEKDFVLNG-PEKKYKMDFLSGTGRVFHNFNAL 278 Query: 374 FEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGTRLRREARHVYVENTPLPAISD 433 +E + R K ++S ++ +++F S + C C G+RL+ E V + + +++ Sbjct: 279 YENAHQAVLRSAKTSKSERAQKRISEFFSYQICPVCHGSRLKPELLKQLVGSLNINEVAE 338 Query: 434 MSIGHAMEFFNNL--KLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTLSRSAETLSGGE 491 M +G + + + + L K+A + E D L+ L+++GL+YLT++R+ TLS GE Sbjct: 339 MPLGDLIAWKDQVFKSLPVDMQKMANALFTEFVDNLQPLLDLGLDYLTMARNGNTLSTGE 398 Query: 492 AQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAI 551 QRI+LA + GV+Y+LDEPSIGLH + + L+ L L GN+++VV+H+ D I Sbjct: 399 LQRIQLARTLRTETTGVLYILDEPSIGLHPANVDGLIKVLHKLVAQGNSLVVVDHNVDII 458 Query: 552 RAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEVPKKRVPANPEK 611 +AAD +I+IGPG+G GGE++ +G ++ I +SL Y+ G + + +KR Sbjct: 459 KAADEIIEIGPGSGEQGGEILDQGSVDQIKKDKQSLIRPYLDGTAAL-MARKRAEKINSV 517 Query: 612 VLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAEPA 671 + NL+DV +PV T +TG SG+GK++LI D+L P Q Q G T+ + Sbjct: 518 KISFDVDHYFNLQDVHAAIPVNQLTAVTGFSGAGKTSLILDSLVPAIQAQAKGETLPKQV 577 Query: 672 PYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESRARGYTPGRF 731 ++V+ +D SPIG++ RS ATYT + +R+LFA ++ + YTP F Sbjct: 578 K----NFESPINQVVSVDASPIGKSTRSTVATYTSIMDNLRKLFARQSLAKEKHYTPTYF 633 Query: 732 SFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKYKGKTIHEVLDM 791 S+N + G C C G G++ +++ FLPD+ C C+G RYN E ++K+ +I ++L++ Sbjct: 634 SYNNKQGACPTCGGTGIVTLDIQFLPDMQQTCPTCEGNRYNHEVQKVKWNSYSIVDILNL 693 Query: 792 TIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQ 851 I EA F P + R L L +VGL Y+ LG+S TLSGGEAQR+KL LS + Sbjct: 694 DINEALPVFKKEPKIERDLLLLKEVGLDYLHLGESTPTLSGGEAQRLKLVTHLSHKQND- 752 Query: 852 TLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADWIVDLGPEGGSG 911 TL++ DEPT GLH D++ L+ V+ KL DQG TI+ I H+L++I AD I+DLGP GG Sbjct: 753 TLFVFDEPTIGLHPLDVKVLVQVIQKLLDQGATIITITHDLNMIVNADNILDLGPRGGKN 812 Query: 912 GGEILVSGTPETVAECEASHTARFLKPM 939 GG+++ +G + + + S T +L Sbjct: 813 GGKVVAAGQTQDLIDHPVSLTTEYLANY 840 Score = 141 bits (355), Expect = 2e-31, Method: Composition-based stats. Identities = 83/351 (23%), Positives = 145/351 (41%), Gaps = 41/351 (11%) Query: 3 KIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYAR 62 +IEVRG R HNLKNI++ IP K + ++GLSGSGKSSLA LY EG RRY+++LS Y R Sbjct: 17 QIEVRGGRVHNLKNIDVNIPLHKFVAISGLSGSGKSSLAMGILYEEGSRRYLDALSTYMR 76 Query: 63 QFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCPD 122 + + + +V ++ + A+++ Q+ T + R+TVGT++E + LRL+F+R+G P CP+ Sbjct: 77 RRIKQGNQANVISVKHIPSALALRQRPTIPSERATVGTMSETFNILRLIFSRLGSPVCPN 136 Query: 123 HDVPLAAQTVSQMVDNVLSQPEGKRLMLL-----APIIKERKGEHTKTLENLASQGYIRA 177 + +++ + + ++ AP ++ E G +R Sbjct: 137 GHRLKPSLEIAEAMAKSGEEMGQLTCLVCGVKFYAPSAEQFAFNSDGACEECGGTGKVRQ 196 Query: 178 RIDGEVCDLSDP--------------------PKLELQKKHTIEVVVDRFKVRDDLTQRL 217 D ++ ++DP P + I++ + D + Sbjct: 197 LDDSKL--IADPRLSIKDGAVASWSLPGRNFMPNVAEHAGVRIDIPYK--DLTDKEKDFV 252 Query: 218 AESFETALEL----SGGTAVVADMDDPKAEELLFSANFACPICGYSMRELEPRLFSFNNP 273 E ++ G + + A ++ FS+ Sbjct: 253 LNGPEKKYKMDFLSGTGRV-FHNFNALYENAHQAVLRSAKTSKSERAQKRISEFFSYQ-- 309 Query: 274 AGACPTCDGLGVQQYFDPDRVIQNPELSLAGGAIRGWDRRNFYYFQMLKSL 324 CP C G ++ V L++ A + Q+ KSL Sbjct: 310 --ICPVCHGSRLKPELLKQLV---GSLNINEVAEMPLGDLIAWKDQVFKSL 355 Score = 82.0 bits (201), Expect = 1e-13, Method: Composition-based stats. Identities = 40/150 (26%), Positives = 62/150 (41%), Gaps = 29/150 (19%) Query: 13 NLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYV-ESLSAYARQFLSLMEKP 71 NL++++ IP ++L VTG SG+GK+SL D+L Q + E+L + F E P Sbjct: 528 NLQDVHAAIPVNQLTAVTGFSGAGKTSLILDSLVPAIQAQAKGETLPKQVKNF----ESP 583 Query: 72 DVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVG--------------- 116 ++ +S++ + RSTV T T I D LR LFAR Sbjct: 584 -------INQVVSVDASPIGKSTRSTVATYTSIMDNLRKLFARQSLAKEKHYTPTYFSYN 636 Query: 117 --EPRCPDHDVPLAAQTVSQMVDNVLSQPE 144 + CP Q + ++ Sbjct: 637 NKQGACPTCGGTGIVTLDIQFLPDMQQTCP 666 Score = 48.4 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 37/201 (18%), Positives = 74/201 (36%), Gaps = 20/201 (9%) Query: 607 ANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNG-- 664 A +++ G R +NLK++ + +P+ F I+G+SGSGKS+L L+ R+ Sbjct: 12 AKLPTQIEVRGGRVHNLKNIDVNIPLHKFVAISGLSGSGKSSLAMGILYEEGSRRYLDAL 71 Query: 665 ----ATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPE 720 + ++ ++H + + Q P + R+ T + F +R +F+ + Sbjct: 72 STYMRRRIKQGNQANVISVKHIPSALALRQRPTIPSERATVGTMSETFNILRLIFSRLGS 131 Query: 721 SRARGYTPGRFSFNVRGGR-----------CEACQGDGVIKVEMHFLPDIYVPCDQCKGK 769 + S + C C F + C++C G Sbjct: 132 PVCPNGHRLKPSLEIAEAMAKSGEEMGQLTCLVCGVKFYAPSAEQFAFNSDGACEECGGT 191 Query: 770 RYNRETLEIKY---KGKTIHE 787 R+ + K +I + Sbjct: 192 GKVRQLDDSKLIADPRLSIKD 212 >UniRef50_C3RJK4 Excinuclease ABC subunit A n=2 Tax=Bacteria RepID=C3RJK4_9MOLU Length = 798 Score = 637 bits (1642), Expect = 0.0, Method: Composition-based stats. Identities = 261/695 (37%), Positives = 390/695 (56%), Gaps = 38/695 (5%) Query: 247 FSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPELSLAGGA 306 F+ C C Y M +L FSFN+ GACPTC GLG + D+V+ P LSL GA Sbjct: 137 FTVYMYCNYCHYKMEKLTRSHFSFNSEKGACPTCFGLGKTLILNLDKVL-EPNLSLREGA 195 Query: 307 IRGWDRR-NFYYFQMLKSLADHYKFDV--EAPWGSLSANVHKVVLYGSGKENIEFKYMND 363 + W R Y + L+ + V E + ++LYG+ + + + Sbjct: 196 VAFWHHRYKEYQIEQLEKVYRELGLSVTPETKVIDFNQQQRVILLYGTESKQFKELFG-- 253 Query: 364 RGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGTRLRREARHVYV 423 I+ FEG++ N+ RR +E ++ + +E++ + + C C G +L +R + V Sbjct: 254 ----KIKISKFEGIITNLWRRVEEKKNQS--KEISSYFDEQVCPDCHGEKLNSLSRQITV 307 Query: 424 ENTPLPAISDMSIGHAMEFFNNLK--LAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTLS 481 T + A + M + + + L+ ++G + + ++ + ++ +++ ++NVGL YL L Sbjct: 308 NKTVITATTKMPLTELLHWLEQLEATVSGPQKEAVQQYIIDLKTKIQRIINVGLGYLHLD 367 Query: 482 RSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTV 541 R TLSGGE QRI+LA+ + + L G++Y+ DEP++GLH +D ++ L LRD NTV Sbjct: 368 RQTMTLSGGEKQRIKLAAALQSQLTGIIYIFDEPTMGLHPKDTAGIINVLKELRDQENTV 427 Query: 542 IVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEVP 601 IV+EHD D I+AAD++ID+GPGAG HGG+++A G + P S+TGQY K+K Sbjct: 428 IVIEHDLDVIKAADYLIDLGPGAGKHGGQILALGTYHELQNNPSSITGQYFVNKKKC--- 484 Query: 602 KKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQ 661 KRV + ++ A +NLK++ +T V +TGVSGSGKSTL+ L Sbjct: 485 -KRVYRTSNRYFEVKNAHVHNLKNIDVTFLVDCLNVVTGVSGSGKSTLVFAVLAK----- 538 Query: 662 LNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPES 721 Q +FD +I + Q I T RSN ATYTG++ +R+LF + + Sbjct: 539 ---------------QHYRYFDDIIAVRQESITTTRRSNIATYTGIYDEIRKLFGSLEAT 583 Query: 722 RARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKYK 781 + G+T FSFN +GGRCE C+G G + M F D+ V C C+GKR+ E L +KY Sbjct: 584 KEMGFTAKHFSFNSQGGRCENCEGLGTVTSNMLFFKDVEVVCPVCQGKRFIPEILALKYH 643 Query: 782 GKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLA 841 +I +VL ++++E FF P + + L+ L DVGL Y+ LGQ TTLSGGE QR+KLA Sbjct: 644 EHSIDDVLHLSVDEGVGFFSDCPKIIKTLKMLQDVGLGYLELGQVLTTLSGGEKQRLKLA 703 Query: 842 RELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADWI 901 L LY++DEPT GLH DI+ LL +L ++ D GNT+V++EHN +I ADWI Sbjct: 704 TTLLTNINKHNLYLIDEPTIGLHPLDIEHLLLLLDRIVDSGNTVVIVEHNQQIINAADWI 763 Query: 902 VDLGPEGGSGGGEILVSGTPETVAECEASHTARFL 936 VDLGP GG+ GG ++ +GTP + E S FL Sbjct: 764 VDLGPAGGNDGGYVIAAGTPNDIKGNENSIIGEFL 798 Score = 169 bits (427), Expect = 6e-40, Method: Composition-based stats. Identities = 56/136 (41%), Positives = 89/136 (65%), Gaps = 6/136 (4%) Query: 1 MDKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAY 60 M I ++ A NLKN++L IPR+KL+V+TGLSGSGKS+LA D LY E QR+Y+E++S Sbjct: 1 MKDIIIKNAYHGNLKNLDLTIPRNKLVVITGLSGSGKSTLAIDVLYQECQRQYLEAIS-- 58 Query: 61 ARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRC 120 + KP V+ I +SPA+ I Q ++NPRS++GT+T+I+ +R+++ ++G +C Sbjct: 59 ----FQGINKPGVEVIRNVSPAVVITQDEKNNNPRSSLGTVTDIYTDIRMIYEKLGVRKC 114 Query: 121 PDHDVPLAAQTVSQMV 136 P + A + + Sbjct: 115 PHCGKMIDASYCHEEL 130 Score = 88.1 bits (217), Expect = 2e-15, Method: Composition-based stats. Identities = 39/110 (35%), Positives = 53/110 (48%), Gaps = 26/110 (23%) Query: 3 KIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYAR 62 EV+ A HNLKNI++ D L VVTG+SGSGKS+L F L + R + Sbjct: 494 YFEVKNAHVHNLKNIDVTFLVDCLNVVTGVSGSGKSTLVFAVLAKQHYRYF--------- 544 Query: 63 QFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLF 112 D I I++ Q+S + RS + T T I+D +R LF Sbjct: 545 -----------DDI------IAVRQESITTTRRSNIATYTGIYDEIRKLF 577 Score = 85.0 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 43/173 (24%), Positives = 64/173 (36%), Gaps = 36/173 (20%) Query: 615 LTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAEPAPYR 674 + A NLK++ LT+P ITG+SGSGKSTL D L+ QRQ A + Sbjct: 6 IKNAYHGNLKNLDLTIPRNKLVVITGLSGSGKSTLAIDVLYQECQRQYLEAISFQGINKP 65 Query: 675 DIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPES------------- 721 ++ + + + I Q PRS+ T T ++T +R ++ + Sbjct: 66 GVEVIRNVSPAVVITQDEKNNNPRSSLGTVTDIYTDIRMIYEKLGVRKCPHCGKMIDASY 125 Query: 722 -----------------------RARGYTPGRFSFNVRGGRCEACQGDGVIKV 751 + T FSFN G C C G G + Sbjct: 126 CHEELVRADNDFTVYMYCNYCHYKMEKLTRSHFSFNSEKGACPTCFGLGKTLI 178 >UniRef50_Q6MKF2 Excinuclease ABC subunit A n=1 Tax=Bdellovibrio bacteriovorus RepID=Q6MKF2_BDEBA Length = 866 Score = 627 bits (1616), Expect = e-178, Method: Composition-based stats. Identities = 301/540 (55%), Positives = 412/540 (76%), Gaps = 2/540 (0%) Query: 401 ISNRPCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKIL 460 + C C G RL+ EA ++ + + +SD+ ++ L+ + IAEKI+ Sbjct: 328 MVLNDCPDCHGARLKNEALNIRLGGKTIAELSDLGALELRDWVAKLQWKAKDQLIAEKIV 387 Query: 461 KEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLH 520 K+I RL +L+ VG YL+LSR + TLSGGEAQRIRLA+Q+G+ L+G +YV+DEPSIGLH Sbjct: 388 KQILARLDYLIRVGTGYLSLSRPSRTLSGGEAQRIRLATQVGSSLIGCLYVMDEPSIGLH 447 Query: 521 QRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAI 580 RD+ RLL + L++ GNT+++VEHDED IR AD V+D+GP AGV GGE++A+G + + Sbjct: 448 PRDHHRLLDIIGELKERGNTILLVEHDEDTIRYADFVVDLGPRAGVLGGEMMAQGTPDEL 507 Query: 581 MAVPESLTGQYMSGKRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITG 640 A P SLTG+Y++G+ +I +PK+R N + ++LTGA GNNL++V L +P+G FT +TG Sbjct: 508 AANPNSLTGKYLNGEMRIPIPKERRKGN-GQFVRLTGATGNNLQNVDLEIPLGTFTTVTG 566 Query: 641 VSGSGKSTLINDTLFPIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSN 700 VSGSGKSTLI DTL+ I + +A+P+PY+ I+GL+ DKVIDI+Q PIGRTPRS Sbjct: 567 VSGSGKSTLIIDTLYKILAQHFY-KALAQPSPYKKIEGLDKIDKVIDINQRPIGRTPRST 625 Query: 701 PATYTGVFTPVRELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIY 760 PATY G+F +R+LFA +P+S+ RGY PGRFSFNV+GGRCE C G G I++EMHFL D++ Sbjct: 626 PATYVGLFPMIRDLFANLPDSKLRGYEPGRFSFNVKGGRCETCMGHGQIRMEMHFLSDVF 685 Query: 761 VPCDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTY 820 V CD C G+RYNRETL IKYK K+I +VL+M++ EA EFF + RKL+TL VGL Y Sbjct: 686 VTCDTCLGRRYNRETLNIKYKSKSIADVLEMSVGEALEFFRNHTQIYRKLETLHRVGLDY 745 Query: 821 IRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRD 880 + LGQS+TTLSGGEAQRVKL++ELS+RGTG+TLYILDEPTTGLHF D+++L++++ +L D Sbjct: 746 MTLGQSSTTLSGGEAQRVKLSKELSRRGTGKTLYILDEPTTGLHFDDVRKLVELIQELAD 805 Query: 881 QGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLKPML 940 QGNT++VIEHN++V+K++D ++DLGP+GG GGG+I+ +GTPE VA+ AS T +FLKP+L Sbjct: 806 QGNTVLVIEHNMEVVKSSDHVIDLGPDGGKGGGQIVAAGTPEKVAKVAASETGKFLKPLL 865 Score = 385 bits (988), Expect = e-105, Method: Composition-based stats. Identities = 155/285 (54%), Positives = 208/285 (72%), Gaps = 3/285 (1%) Query: 2 DKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYA 61 D I V+GA+ HNLKN+++ IPR+K+ V TGLSGSGKSSLAFDT+YAEGQRRYVESLSAYA Sbjct: 6 DGIVVKGAKEHNLKNVSVTIPRNKITVFTGLSGSGKSSLAFDTVYAEGQRRYVESLSAYA 65 Query: 62 RQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCP 121 R FL ++KP+VD I GLSPAI+I+QKS S NPRSTVGT+TEI+DYLRLLFA++G P CP Sbjct: 66 RNFLEQLKKPEVDSITGLSPAIAIDQKSVSTNPRSTVGTVTEIYDYLRLLFAKLGIPECP 125 Query: 122 DHDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARIDG 181 H +P+++QT Q+++ V + G + +LAP+ +KGE + A +G+++A++DG Sbjct: 126 THHIPVSSQTPQQIIEEVFKKGVGTKFFVLAPMASGKKGEFLAEFQRWAKKGFVKAKVDG 185 Query: 182 EVCDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVADMDDPK 241 ++ +L KL K H I++VVD+ ++D L RL+ES TAL ++ G ++ +D Sbjct: 186 KMIELDKATKLAKTKTHDIDLVVDQLILKDTLKLRLSESINTALSMANGRVIIETLD--- 242 Query: 242 AEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQ 286 E +S + ACP CGYS E+EPRLFSFNNP GACPTC GLG Sbjct: 243 GERTSYSLHSACPECGYSFPEIEPRLFSFNNPRGACPTCHGLGTI 287 Score = 103 bits (256), Expect = 5e-20, Method: Composition-based stats. Identities = 41/116 (35%), Positives = 56/116 (48%), Gaps = 15/116 (12%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 63 + + GA +NL+N++L IP VTG+SGSGKS+L DTLY A+ Sbjct: 539 VRLTGATGNNLQNVDLEIPLGTFTTVTGVSGSGKSTLIIDTLYK-----------ILAQH 587 Query: 64 FLSLMEKP-DVDHIEGL---SPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARV 115 F + +P IEGL I I Q+ PRST T + +R LFA + Sbjct: 588 FYKALAQPSPYKKIEGLDKIDKVIDINQRPIGRTPRSTPATYVGLFPMIRDLFANL 643 Score = 82.7 bits (203), Expect = 7e-14, Method: Composition-based stats. Identities = 38/120 (31%), Positives = 62/120 (51%), Gaps = 6/120 (5%) Query: 606 PANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGA 665 ++ E + + GA+ +NLK+V++T+P T TG+SGSGKS+L DT++ QR+ + Sbjct: 1 MSHAEDGIVVKGAKEHNLKNVSVTIPRNKITVFTGLSGSGKSSLAFDTVYAEGQRRYVES 60 Query: 666 TIAEPAPYRDIQGLEHFDKV------IDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVP 719 A + + D + I IDQ + PRS T T ++ +R LFA + Sbjct: 61 LSAYARNFLEQLKKPEVDSITGLSPAIAIDQKSVSTNPRSTVGTVTEIYDYLRLLFAKLG 120 >UniRef50_D2ATA6 Excinuclease ABC, A subunit n=4 Tax=Actinomycetales RepID=D2ATA6_STRRD Length = 824 Score = 625 bits (1612), Expect = e-177, Method: Composition-based stats. Identities = 286/771 (37%), Positives = 407/771 (52%), Gaps = 32/771 (4%) Query: 182 EVCDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVADMDDPK 241 + + P+++ + VD+ ++ + L V +DD Sbjct: 72 QFISPRNRPQVDRISGLGATLAVDQRRLNRNPRSTLG--------------SVTGVDDFL 117 Query: 242 AEELLFSANFACPICGYSMREL---EPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNP 298 LLF+ A EL F + G C C G GV+ DR++ P Sbjct: 118 G--LLFARMPALGPEAREFPELRGLTSAYFDRYSMEGRCKACGGRGVEVRPAEDRIVTRP 175 Query: 299 ELSLAGGAIRGWDRRNFYYFQMLKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKENIEF 358 +L L GA +DR N F L +LA+ Y D+ PW L + VL+G+G I + Sbjct: 176 DLPLLAGAGTWFDRANSGEFWALPALAERYGADLALPWRELPEEFRRAVLHGTGDGPITY 235 Query: 359 KYMNDRGD-----TSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGTR 413 K + T R P G + + R + + A RE A+F+ C C GT Sbjct: 236 KITTKQRKAGADVTVERSVPLRGAVSEVSRLHDAAGTDAAREHYARFMRRTGCPRCGGTG 295 Query: 414 LRREARHVYVENTPLPAISDMSIGHAMEFFNNLK--LAGQRAKIAEKILKEIGDRLKFLV 471 V + P + + + + + ++ L + K+A IL + R++ +V Sbjct: 296 FGEVGLTVRLAGLAYPEVIRLPVEDLRGWVDTIEPTLTPTQRKVAGDILPGLARRVRLMV 355 Query: 472 NVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTL 531 +GL +L ++RSA ++SGGE QR R+ +Q+ L G+++VLDEP GLH D L L Sbjct: 356 ELGLGHLQITRSAPSMSGGELQRARITAQLNTDLTGIVFVLDEPGAGLHPADKHPLREIL 415 Query: 532 IHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQY 591 LRD GNTV++VEHD + I AD V+D+GPGAG GG +VA P + S+TG Y Sbjct: 416 HDLRDAGNTVLLVEHDPELIALADWVVDLGPGAGREGGRLVASAPPWELSRDGRSITGAY 475 Query: 592 MSGKRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLIN 651 + G+ +R L L G + +N++ + +P+ TCITGVSGSGKS+L++ Sbjct: 476 LGGRGPRVRRTRRSDPATTPRLGLIGVQAHNVRLDRVDIPLHALTCITGVSGSGKSSLLH 535 Query: 652 DTLFPIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPV 711 + L L G P I+G D V +DQ+PIGRTPRS+PATYT F + Sbjct: 536 EALGASLDAVLRGE---RPRAVARIEGAGLLDWVTVVDQNPIGRTPRSSPATYTKAFDTI 592 Query: 712 RELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRY 771 R L+A P +R+RG G FSFN RGGRCEAC G G +V+MHF+PD++V CD C+G+R+ Sbjct: 593 RRLYASTPAARSRGLGAGAFSFNSRGGRCEACAGYGRRQVDMHFMPDMWVGCDVCEGRRF 652 Query: 772 NRETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLS 831 E L + Y+GK + EVLDMT++EA EFF LA L+ GL Y+RLGQSAT LS Sbjct: 653 TPELLAVTYRGKAVDEVLDMTVDEAAEFFGERADLAATLRAAQQAGLGYLRLGQSATELS 712 Query: 832 GGEAQRVKLARELS--KRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIE 889 GGEAQR+KLA + G+ L ILDEP TGLH +D+Q+++D L GN++V+ E Sbjct: 713 GGEAQRLKLANAIMLGGGSRGRGLVILDEPVTGLHPSDVQRVVDAFDTLLACGNSVVIAE 772 Query: 890 HNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLKPML 940 H+L V ADWIVD+GP G GG I+ G P T+A TA +L+P+L Sbjct: 773 HDLHVAACADWIVDMGPGAGDRGGRIVNEGPPATIAAGPG-VTAGYLRPLL 822 Score = 174 bits (440), Expect = 2e-41, Method: Composition-based stats. Identities = 78/296 (26%), Positives = 125/296 (42%), Gaps = 54/296 (18%) Query: 2 DKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYA 61 D I V GARTHNL+N+++ P+++++ TG+SGSGK+SLA DT++AE Q RY+ +S + Sbjct: 11 DVITVVGARTHNLRNVSVTFPKNRIVAFTGVSGSGKTSLAIDTVHAEAQLRYLNGVSPFF 70 Query: 62 RQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVG----- 116 RQF+S +P VD I GL ++++Q+ + NPRST+G++T + D+L LLFAR+ Sbjct: 71 RQFISPRNRPQVDRISGLGATLAVDQRRLNRNPRSTLGSVTGVDDFLGLLFARMPALGPE 130 Query: 117 --------------------EPRCPDHDVPLAAQTVSQMVDNVLSQP------------- 143 E RC ++ D ++++P Sbjct: 131 AREFPELRGLTSAYFDRYSMEGRCKACGGRGVEVRPAE--DRIVTRPDLPLLAGAGTWFD 188 Query: 144 --EGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARIDGEVCDLSDPPKLELQKKHTIE 201 L + + + L + + RA + G Q+K + Sbjct: 189 RANSGEFWALPALAERYGADLALPWRELPEE-FRRAVLHGTGDGPITYKITTKQRKAGAD 247 Query: 202 VVVDRFKVRDDLTQRLAESFETALELSGGTAVVADMDDPKAEELLFSANFACPICG 257 V V+R A+ A D + F CP CG Sbjct: 248 VTVERSV-----------PLRGAVSEVSRLHDAAGTDAAREHYARFMRRTGCPRCG 292 Score = 93.1 bits (230), Expect = 5e-17, Method: Composition-based stats. Identities = 60/220 (27%), Positives = 90/220 (40%), Gaps = 20/220 (9%) Query: 604 RVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLN 663 R V+ + GAR +NL++V++T P TGVSGSGK++L DT+ AQ + Sbjct: 4 RDGTPDGDVITVVGARTHNLRNVSVTFPKNRIVAFTGVSGSGKTSLAIDTVHAEAQLRYL 63 Query: 664 GATIAEPAPYRDIQGLEHFDKV------IDIDQSPIGRTPRSNPATYTGVFTPVRELFAG 717 + + D++ + +DQ + R PRS + TGV + LFA Sbjct: 64 NGVSPFFRQFISPRNRPQVDRISGLGATLAVDQRRLNRNPRSTLGSVTGVDDFLGLLFAR 123 Query: 718 V----PESRA----RGYTPGRFSFNVRGGRCEACQGDGVI--KVEMHFLPDIYVPCDQCK 767 + PE+R RG T F GRC+AC G GV E + +P Sbjct: 124 MPALGPEAREFPELRGLTSAYFDRYSMEGRCKACGGRGVEVRPAEDRIVTRPDLPLLAGA 183 Query: 768 GKRYNRETLEIKYKGKTIHE----VLDMTIEEAREFFDAV 803 G ++R + + E L + E E F Sbjct: 184 GTWFDRANSGEFWALPALAERYGADLALPWRELPEEFRRA 223 Score = 73.1 bits (178), Expect = 4e-11, Method: Composition-based stats. Identities = 40/123 (32%), Positives = 55/123 (44%), Gaps = 17/123 (13%) Query: 6 VRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQFL 65 + G + HN++ + IP L +TG+SGSGKSSL + L A SL A R Sbjct: 499 LIGVQAHNVRLDRVDIPLHALTCITGVSGSGKSSLLHEALGA--------SLDAVLRG-- 548 Query: 66 SLMEKPD-VDHIEG---LSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCP 121 E+P V IEG L ++Q PRS+ T T+ D +R L+A R Sbjct: 549 ---ERPRAVARIEGAGLLDWVTVVDQNPIGRTPRSSPATYTKAFDTIRRLYASTPAARSR 605 Query: 122 DHD 124 Sbjct: 606 GLG 608 >UniRef50_D1JG21 Putative uncharacterized protein n=1 Tax=uncultured archaeon RepID=D1JG21_9ARCH Length = 799 Score = 615 bits (1586), Expect = e-174, Method: Composition-based stats. Identities = 273/744 (36%), Positives = 418/744 (56%), Gaps = 26/744 (3%) Query: 207 FKVRDDLTQRLAESFETALELSGGTAVVADMDDPKAEELLFSANFACPICGYSMRELEPR 266 F + + L+ +A TAL + + V + + LE + Sbjct: 69 FDLLNGLSPTVAVEQRTALYV-NPRSTVGTKTMIYSLLRQLYT-----LESTKAGSLEFK 122 Query: 267 LFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPELSL----AGGAIRGWDRRNFYYFQMLK 322 F+FN+P G CP C G G Q F +++ P +L G+ +NF K Sbjct: 123 HFTFNDPNGWCPNCKGQGYIQEFHEKKLVPEPTKNLLQICEEGSAAFGSMKNFT-----K 177 Query: 323 SLADHYKFDVEAPWGSLSANVHKVVLYGSGKENIEFKYMNDRGDTSIRRHPFEGVLHNME 382 LA+ FDV P+ L + + LYGS E ++ K+ ++R + + FEG++ + Sbjct: 178 GLAESMNFDVNTPYNKLPQKIRDIFLYGS-DEKMKIKWRSERFEG-VFDTKFEGIIPYLW 235 Query: 383 RRYKETESSAVREELAK-FISNRPCASCEGTRLRREARHVYVENTPLPAISDMSIGHAME 441 R +T S+ ++ K F++ C SC G R++ + + + + +++M + +E Sbjct: 236 RVLAKTTSAYRINKIEKNFMTKVTCPSCYGYRIKEQVTNATINGKHIGELANMPMDELIE 295 Query: 442 FFNNLKLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQI 501 F L + + I EI RL+ G++YL+L+RS TLSGGE QR+ L + Sbjct: 296 FLKRLADTHVKTVQGKAIKDEIIKRLEKSRLAGISYLSLNRSMTTLSGGEVQRLNLMIHL 355 Query: 502 GAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIG 561 GL ++++LDEPS G+H+ + L+ L + +LGN+VI+VEHD I +D +ID+G Sbjct: 356 NTGLNSLVFILDEPSTGMHEIEKNNLMTLLKEINNLGNSVIIVEHDRSIISKSDQIIDLG 415 Query: 562 PGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEVP---KKRVPANPEKVLKLTGA 618 PG G GGE+V +G ++ I +S+TG+++SG+ KI ++R K L + Sbjct: 416 PGPGRLGGEIVFQGTVDEIKKDKKSITGKFLSGELKISKKNSGQRRRITKSAKFLVMKNV 475 Query: 619 RGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAEP-----APY 673 NNLK++ + +P+GL I GVSGSGKS+LI+DTL P+ + + E Sbjct: 476 TTNNLKNLEVKIPLGLMVGIAGVSGSGKSSLISDTLVPLLKEHFSKRDNEEEFIQIDEIK 535 Query: 674 RDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESRARGYTPGRFSF 733 + G E+ I I QSPIGR S P +Y G++ +R+LFA ++ R Y+ G FSF Sbjct: 536 GKLSGWENISDCIVITQSPIGRVKTSTPVSYIGIWDNIRKLFAKQELAKQRKYSSGHFSF 595 Query: 734 NVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKYKGKTIHEVLDMTI 793 N G C C+G G I +++ I +PC++C G RY E L+++YKGK HE+L++T+ Sbjct: 596 NSDKGGCPNCKGAGSIDLQISPFTKIDIPCEECNGTRYTPEILDVEYKGKNTHEILNLTV 655 Query: 794 EEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTL 853 E+ + F P + + L+ L ++G+ YI LGQ ATTLSGGEAQR+KLA+EL K +TL Sbjct: 656 SESLDIFKDEPTILKHLKILDEIGMGYITLGQPATTLSGGEAQRIKLAKELGKSRRSKTL 715 Query: 854 YILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGG 913 Y+LDEPT GLH DIQ++L++L KL DQGNT+++IEHN+D++ AD++V+LGPEGG GG Sbjct: 716 YVLDEPTFGLHDNDIQKMLNILDKLVDQGNTVLIIEHNIDILSYADYLVELGPEGGPKGG 775 Query: 914 EILVSGTPETVAECEASHTARFLK 937 EI+ GTPE V E S TA FL Sbjct: 776 EIIAMGTPEEVKMNEQSKTAPFLA 799 Score = 147 bits (372), Expect = 1e-33, Method: Composition-based stats. Identities = 63/151 (41%), Positives = 89/151 (58%), Gaps = 21/151 (13%) Query: 1 MDKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAY 60 M+ IEV GAR HNLKNI + IP++K++ +TG+SGSGKSSLAFD L+ EG+RRY++S+ Sbjct: 1 MNNIEVVGARIHNLKNITVKIPKNKIVTITGVSGSGKSSLAFDLLFEEGRRRYLQSI--- 57 Query: 61 ARQFLSLMEKPDVDHIEGLSPAISIEQKSTSH-NPRSTVGTITEIHDYLRLLF----ARV 115 + EKP D + GLSP +++EQ++ + NPRSTVGT T I+ LR L+ + Sbjct: 58 GFPYYIEKEKP-FDLLNGLSPTVAVEQRTALYVNPRSTVGTKTMIYSLLRQLYTLESTKA 116 Query: 116 GEPR------------CPDHDVPLAAQTVSQ 134 G CP+ Q + Sbjct: 117 GSLEFKHFTFNDPNGWCPNCKGQGYIQEFHE 147 Score = 141 bits (355), Expect = 2e-31, Method: Composition-based stats. Identities = 66/205 (32%), Positives = 109/205 (53%), Gaps = 17/205 (8%) Query: 750 KVEMHFLPDIYVPCDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAVP----- 804 K+E +F+ V C C G R + GK I E+ +M ++E EF + Sbjct: 249 KIEKNFM--TKVTCPSCYGYRIKEQVTNATINGKHIGELANMPMDELIEFLKRLADTHVK 306 Query: 805 ---------ALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYI 855 + ++L+ G++Y+ L +S TTLSGGE QR+ L L G ++I Sbjct: 307 TVQGKAIKDEIIKRLEKSRLAGISYLSLNRSMTTLSGGEVQRLNLMIHL-NTGLNSLVFI 365 Query: 856 LDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEI 915 LDEP+TG+H + L+ +L ++ + GN+++++EH+ +I +D I+DLGP G GGEI Sbjct: 366 LDEPSTGMHEIEKNNLMTLLKEINNLGNSVIIVEHDRSIISKSDQIIDLGPGPGRLGGEI 425 Query: 916 LVSGTPETVAECEASHTARFLKPML 940 + GT + + + + S T +FL L Sbjct: 426 VFQGTVDEIKKDKKSITGKFLSGEL 450 Score = 89.7 bits (221), Expect = 5e-16, Method: Composition-based stats. Identities = 43/174 (24%), Positives = 64/174 (36%), Gaps = 35/174 (20%) Query: 2 DKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYA 61 + ++ T+NLKN+ + IP ++ + G+SGSGKSSL DTL V L + Sbjct: 468 KFLVMKNVTTNNLKNLEVKIPLGLMVGIAGVSGSGKSSLISDTL--------VPLLKEHF 519 Query: 62 RQFLSLMEKPDVDHI-------EGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFAR 114 + + E +D I E +S I I Q ST + I D +R LFA+ Sbjct: 520 SKRDNEEEFIQIDEIKGKLSGWENISDCIVITQSPIGRVKTSTPVSYIGIWDNIRKLFAK 579 Query: 115 V--------------------GEPRCPDHDVPLAAQTVSQMVDNVLSQPEGKRL 148 G P C + +D + G R Sbjct: 580 QELAKQRKYSSGHFSFNSDKGGCPNCKGAGSIDLQISPFTKIDIPCEECNGTRY 633 Score = 88.9 bits (219), Expect = 8e-16, Method: Composition-based stats. Identities = 44/143 (30%), Positives = 71/143 (49%), Gaps = 10/143 (6%) Query: 614 KLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGAT-----IA 668 ++ GAR +NLK++T+ +P ITGVSGSGKS+L D LF +R+ + I Sbjct: 5 EVVGARIHNLKNITVKIPKNKIVTITGVSGSGKSSLAFDLLFEEGRRRYLQSIGFPYYIE 64 Query: 669 EPAPYRDIQGLEHFDKVIDIDQSPIGR-TPRSNPATYTGVFTPVRELFAGVPESRARGYT 727 + P+ + G + ++Q PRS T T +++ +R+L+ +A Sbjct: 65 KEKPFDLLNG---LSPTVAVEQRTALYVNPRSTVGTKTMIYSLLRQLYTLEST-KAGSLE 120 Query: 728 PGRFSFNVRGGRCEACQGDGVIK 750 F+FN G C C+G G I+ Sbjct: 121 FKHFTFNDPNGWCPNCKGQGYIQ 143 >UniRef50_B5YKV1 Excinuclease ABC, A subunit n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YKV1_THEYD Length = 833 Score = 613 bits (1580), Expect = e-173, Method: Composition-based stats. Identities = 297/542 (54%), Positives = 393/542 (72%), Gaps = 3/542 (0%) Query: 399 KFISNRPCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEK 458 +S PC CEGTRLR E+ + + + +S SI F LK + A IAE+ Sbjct: 293 DVLSLIPCKLCEGTRLREESLAIKINGKNIAELSTFSIDELKNFLYGLKFSSYNAPIAER 352 Query: 459 ILKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIG 518 ILKEI ++ FL +G+ YL+L+R + +LSGGEAQRIRLA+Q+G+ L GV+YVLDEPSIG Sbjct: 353 ILKEIFIKIDFLQKIGVGYLSLNRPSFSLSGGEAQRIRLATQLGSHLSGVLYVLDEPSIG 412 Query: 519 LHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLE 578 LH RD +L+ ++ L GNT+IVVEHDE I AD V+++GPG G GG + P + Sbjct: 413 LHPRDCLKLIESMKELSIRGNTLIVVEHDESTIMNADLVVELGPGGGRDGGYLTGVYPPD 472 Query: 579 AIMAVPESLTGQYMSGKRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCI 638 ++ S+T QY++G KI +P++R +K +K+ GA+ NLK++ + +P+G+F C+ Sbjct: 473 KLLKSRNSITAQYLTGSSKISIPEER--RKSQKFIKIIGAQAYNLKNINVEIPLGVFVCV 530 Query: 639 TGVSGSGKSTLINDTLFPIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPR 698 TGV+GSGKSTLI + L+ ++L A + P Y+ I+G+E DKV+ +DQSPIGRT R Sbjct: 531 TGVAGSGKSTLIFEILYKALVKKLYNANV-YPGNYKAIEGIEQIDKVVCVDQSPIGRTSR 589 Query: 699 SNPATYTGVFTPVRELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPD 758 S PATYT V T +RELF+ +P++R RGY+ RFSFN+ GGRCE+CQGDG+ K++MH LPD Sbjct: 590 STPATYTQVMTEIRELFSLLPDARVRGYSKSRFSFNLLGGRCESCQGDGIKKIKMHLLPD 649 Query: 759 IYVPCDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGL 818 +YV CD CKGKRYN ETL+IKYKGK I EVL MT+ EA EFF AVP L +KLQ + D+GL Sbjct: 650 VYVVCDNCKGKRYNEETLQIKYKGKNISEVLQMTVSEALEFFSAVPKLNQKLQIMEDIGL 709 Query: 819 TYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKL 878 YI LGQ ATTLSGGEAQRVKLA+ELSK+ TG+TLYILDEPTTGLH DI++LL++L +L Sbjct: 710 GYITLGQPATTLSGGEAQRVKLAKELSKKPTGKTLYILDEPTTGLHMVDIERLLNILQRL 769 Query: 879 RDQGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLKP 938 D GNT++VIEH+L++IK AD+I+DLGPEGGS GG ++ GTPE VA S+T +FLK Sbjct: 770 VDMGNTVIVIEHDLEIIKCADYIIDLGPEGGSSGGYLIAKGTPEEVALNPNSYTGKFLKE 829 Query: 939 ML 940 L Sbjct: 830 KL 831 Score = 368 bits (944), Expect = e-100, Method: Composition-based stats. Identities = 136/283 (48%), Positives = 202/283 (71%), Gaps = 3/283 (1%) Query: 3 KIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYAR 62 I ++ AR HNLKNI+L++PR+K+IV+TG SGSGKSSLA DT++AE RRY++SL R Sbjct: 4 NIVIKKARQHNLKNIDLILPRNKIIVITGPSGSGKSSLAMDTIFAEAHRRYLQSLPIELR 63 Query: 63 QFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCPD 122 ++KPDVD IEGLSP IS++QK+ S +PRSTVGTITEI+DYLRLL+A++G P CP Sbjct: 64 TIFDQLQKPDVDFIEGLSPGISVDQKTISKSPRSTVGTITEIYDYLRLLYAKIGIPYCPR 123 Query: 123 HDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARIDGE 182 L +Q +++M+D +LS EG ++ +LAP++ E+KGEH + + ++G+IRARIDG Sbjct: 124 CGRRLISQDINKMLDFILSLTEGTKIQILAPVVIEKKGEHKEIFDRAKAEGFIRARIDGN 183 Query: 183 VCDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVADMDDPKA 242 + +L+ L+ +HTIE++VDR V++ ++ + E A++ + T VV +++ Sbjct: 184 IVELTQEFSLKKHVRHTIELIVDRIIVKEKYKNQIKRALELAMKYTQ-TVVVNIVNE--N 240 Query: 243 EELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGV 285 +++FS+ ACP CG S+ +++PRLFSFN+ GACP C GLG Sbjct: 241 RDIIFSSVLACPNCGISLPDIDPRLFSFNSKYGACPRCKGLGY 283 Score = 166 bits (421), Expect = 3e-39, Method: Composition-based stats. Identities = 81/226 (35%), Positives = 122/226 (53%), Gaps = 17/226 (7%) Query: 727 TPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDI--YVPCDQCKGKRYNRETLEIKYKGKT 784 P FSFN + G C C+G G +E D+ +PC C+G R E+L IK GK Sbjct: 262 DPRLFSFNSKYGACPRCKGLGYENIEEEEEIDVLSLIPCKLCEGTRLREESLAIKINGKN 321 Query: 785 IHEVLDMTIEEAREFF-------DAVPALARKL-------QTLMDVGLTYIRLGQSATTL 830 I E+ +I+E + F P R L L +G+ Y+ L + + +L Sbjct: 322 IAELSTFSIDELKNFLYGLKFSSYNAPIAERILKEIFIKIDFLQKIGVGYLSLNRPSFSL 381 Query: 831 SGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEH 890 SGGEAQR++LA +L +G LY+LDEP+ GLH D +L++ + +L +GNT++V+EH Sbjct: 382 SGGEAQRIRLATQLGSHLSG-VLYVLDEPSIGLHPRDCLKLIESMKELSIRGNTLIVVEH 440 Query: 891 NLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFL 936 + I AD +V+LGP GG GG + P+ + + S TA++L Sbjct: 441 DESTIMNADLVVELGPGGGRDGGYLTGVYPPDKLLKSRNSITAQYL 486 Score = 100 bits (248), Expect = 4e-19, Method: Composition-based stats. Identities = 37/126 (29%), Positives = 65/126 (51%), Gaps = 9/126 (7%) Query: 2 DKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLY-AEGQRRYVESLSAY 60 I++ GA+ +NLKNIN+ IP + VTG++GSGKS+L F+ LY A ++ Y ++ Sbjct: 503 KFIKIIGAQAYNLKNINVEIPLGVFVCVTGVAGSGKSTLIFEILYKALVKKLYNANVYPG 562 Query: 61 ARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRC 120 + + + IE + + ++Q RST T T++ +R LF+ + + R Sbjct: 563 NYKAI--------EGIEQIDKVVCVDQSPIGRTSRSTPATYTQVMTEIRELFSLLPDARV 614 Query: 121 PDHDVP 126 + Sbjct: 615 RGYSKS 620 Score = 85.0 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 47/185 (25%), Positives = 74/185 (40%), Gaps = 23/185 (12%) Query: 609 PEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIA 668 ++ + + AR +NLK++ L LP ITG SGSGKS+L DT+F A R+ + Sbjct: 1 MQQNIVIKKARQHNLKNIDLILPRNKIIVITGPSGSGKSSLAMDTIFAEAHRRYLQSLPI 60 Query: 669 EPAPYRDIQGLEHFDKV------IDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESR 722 E D D + I +DQ I ++PRS T T ++ +R L+A + Sbjct: 61 ELRTIFDQLQKPDVDFIEGLSPGISVDQKTISKSPRSTVGTITEIYDYLRLLYAKIGIP- 119 Query: 723 ARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKYKG 782 C C + + L I + K + +E K + Sbjct: 120 ----------------YCPRCGRRLISQDINKMLDFILSLTEGTKIQILAPVVIEKKGEH 163 Query: 783 KTIHE 787 K I + Sbjct: 164 KEIFD 168 >UniRef50_C4DT53 Excinuclease ATPase subunit n=3 Tax=Bacteria RepID=C4DT53_9ACTO Length = 780 Score = 612 bits (1579), Expect = e-173, Method: Composition-based stats. Identities = 266/834 (31%), Positives = 392/834 (47%), Gaps = 109/834 (13%) Query: 133 SQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARIDGEVCDLSDPPKL 192 ++ GK ++ + E + + +T G++ P Sbjct: 28 HRITVFTGVSGSGKSSIVFDTVAAEAQRQINETHSAFVR-GFLPKY---------GQPDA 77 Query: 193 ELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVADMDDPKAEELLFSANFA 252 + + + +++D+ ++ + V + D L + Sbjct: 78 DAIENLSAAIIIDQQRLG-----------------GNSRSTVGTITDIYTLLRLLYSRVG 120 Query: 253 CPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPELSLAGGAIRGWDR 312 P G + +FSFN+PAG C C GLG D D + + SL GA+ D Sbjct: 121 SPNIGGAY------VFSFNDPAGMCERCQGLGRVVTVDMDEFV-DMSKSLNEGALLHPDF 173 Query: 313 RNFYYFQMLKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKENIEFKYMNDRGDTSIRRH 372 + +F + + FD++ P ++ +G+ I F + Sbjct: 174 KVGKWFWNM--YSASGFFDMDKPLAEYGKEELDILFHGT-DAKIPFAWEGG-----TINS 225 Query: 373 PFEGVLHNMERRY----KETESSAVREELAKFISNRPCASCEGTRLRREARHVYVENTPL 428 +EG + R E S R +F + C +CEG RL + R + + Sbjct: 226 KYEGAVEKFTRLIMSKSAEEMSDRNRAIFERFTTTGVCDACEGLRLNEKVRSCKLAGLHI 285 Query: 429 PAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTLSRSAETLS 488 ++ M I + L+G ++++L + +RL L+ +GL YL+L R+ +LS Sbjct: 286 AEMASMEITDLVRV-----LSGVDGGSSQRVLDSLLERLDHLITIGLGYLSLHRATGSLS 340 Query: 489 GGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDE 548 GGE+QRI+ + + L +MY+ DEPSIGLH RD R+ L+ LRD GNTV+VVEHD Sbjct: 341 GGESQRIKTVRNLNSSLTEMMYIFDEPSIGLHARDVHRMNELLVKLRDKGNTVLVVEHDP 400 Query: 549 DAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEVPKKRVPAN 608 D I ADHVID+GPGAG HGG +V EGP+ + ++ TG + + + K Sbjct: 401 DVIAVADHVIDVGPGAGTHGGTIVYEGPVAGLKEA-DTPTGAQLRRRSGL----KDETRA 455 Query: 609 PEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIA 668 + +N+ V++ P G+ T +TGV+GSGKSTL+ + L Sbjct: 456 ANGKYPVADVNSHNVSGVSVDFPAGVLTVVTGVAGSGKSTLVTEGLLT------------ 503 Query: 669 EPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESRARGYTP 728 I IDQ+ + RSN ATYTG+ +R+LFA V G P Sbjct: 504 ------------QHPDAIVIDQTAVAANRRSNTATYTGLADGIRKLFANV-----NGVKP 546 Query: 729 GRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKYKGKTIHEV 788 FSFN G C CQG GVI ++ F+ + PC+ C+GKR+ E L +GK I +V Sbjct: 547 SLFSFNS-DGACPDCQGHGVIYTDLAFMDGVKTPCETCEGKRFKSEVLAHTVRGKNISDV 605 Query: 789 LDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSK-- 846 L++T EEA EFF L L+ L DVGL Y+ LGQ TLSGGE QR+KLA ELS Sbjct: 606 LNLTAEEAAEFFTE-KKLRTVLRALNDVGLDYLTLGQPLNTLSGGECQRIKLATELSSMY 664 Query: 847 --------------------RGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIV 886 LY++DEPTTGLH +DI++LL + L D GNT++ Sbjct: 665 SQASPAPTGSIGSGARASSFSARLNRLYVMDEPTTGLHMSDIEKLLGLFDHLVDSGNTVI 724 Query: 887 VIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLKPML 940 +IEHN+DVIK ADWI+DLGP+GGS GG ++ GTP + + SHT FL+ L Sbjct: 725 IIEHNMDVIKHADWIIDLGPDGGSSGGRVMFEGTPRQLLDTRGSHTGDFLRREL 778 Score = 201 bits (512), Expect = 8e-50, Method: Composition-based stats. Identities = 89/298 (29%), Positives = 131/298 (43%), Gaps = 52/298 (17%) Query: 3 KIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYAR 62 I++ GAR +NLKNI++ IP+ ++ V TG+SGSGKSS+ FDT+ AE QR+ E+ SA+ R Sbjct: 7 SIDITGARENNLKNIDITIPKHRITVFTGVSGSGKSSIVFDTVAAEAQRQINETHSAFVR 66 Query: 63 QFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPR--- 119 FL +PD D IE LS AI I+Q+ N RSTVGTIT+I+ LRLL++RVG P Sbjct: 67 GFLPKYGQPDADAIENLSAAIIIDQQRLGGNSRSTVGTITDIYTLLRLLYSRVGSPNIGG 126 Query: 120 ------------CPDHD--VPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKT 165 C + + + VD S EG LL P K K Sbjct: 127 AYVFSFNDPAGMCERCQGLGRVVTVDMDEFVDMSKSLNEGA---LLHPDFKVGKWFW--- 180 Query: 166 LENLASQGYIRARIDGEVCDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETAL 225 ++ G+ D+ P L K ++++ ++ ++E Sbjct: 181 -NMYSASGF---------FDMDKP--LAEYGKEELDILF------HGTDAKIPFAWE--- 219 Query: 226 ELSGGTAVVADMDDPKAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGL 283 GG ++ + M + +F G C C+GL Sbjct: 220 ---GG-----TINSKYEGAVEKFTRLIMSKSAEEMSDRNRAIFERFTTTGVCDACEGL 269 Score = 98.5 bits (244), Expect = 1e-18, Method: Composition-based stats. Identities = 58/155 (37%), Positives = 80/155 (51%), Gaps = 9/155 (5%) Query: 606 PANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGA 665 + + +TGAR NNLK++ +T+P T TGVSGSGKS+++ DT+ AQRQ+N Sbjct: 1 MHSGSTSIDITGARENNLKNIDITIPKHRITVFTGVSGSGKSSIVFDTVAAEAQRQINET 60 Query: 666 TIAEPAPYRDIQGLEHFDKV------IDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVP 719 A + G D + I IDQ +G RS T T ++T +R L++ V Sbjct: 61 HSAFVRGFLPKYGQPDADAIENLSAAIIIDQQRLGGNSRSTVGTITDIYTLLRLLYSRVG 120 Query: 720 ESRARGYTPGRFSFNVRGGRCEACQGDG-VIKVEM 753 G FSFN G CE CQG G V+ V+M Sbjct: 121 SPNIGG--AYVFSFNDPAGMCERCQGLGRVVTVDM 153 Score = 80.8 bits (198), Expect = 3e-13, Method: Composition-based stats. Identities = 42/172 (24%), Positives = 63/172 (36%), Gaps = 46/172 (26%) Query: 6 VRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQFL 65 V +HN+ +++ P L VVTG++GSGKS+L + Sbjct: 462 VADVNSHNVSGVSVDFPAGVLTVVTGVAGSGKSTLVTE---------------------- 499 Query: 66 SLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVG--------- 116 + AI I+Q + + N RS T T + D +R LFA V Sbjct: 500 --------GLLTQHPDAIVIDQTAVAANRRSNTATYTGLADGIRKLFANVNGVKPSLFSF 551 Query: 117 --EPRCPDHDVPLAAQTVSQMVDNV---LSQPEGKRL--MLLAPIIKERKGE 161 + CPD T +D V EGKR +LA ++ + Sbjct: 552 NSDGACPDCQGHGVIYTDLAFMDGVKTPCETCEGKRFKSEVLAHTVRGKNIS 603 >UniRef50_C8PNC0 UvrABC system protein A n=4 Tax=cellular organisms RepID=C8PNC0_9SPIO Length = 860 Score = 611 bits (1575), Expect = e-173, Method: Composition-based stats. Identities = 249/825 (30%), Positives = 401/825 (48%), Gaps = 35/825 (4%) Query: 133 SQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARIDGEVC-DLSD--- 188 +V GK + L + E + + L Y R RI D+ + Sbjct: 53 EMLVAIAGVSGSGKSSLALGTLYAEGSRRYLEALST-----YTRRRITQSGRADIDEIHH 107 Query: 189 -PPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVADMDDPKAEELLF 247 P L L ++ I V F L S G P + + Sbjct: 108 IPAALALHQRPGIPGVRSTF----GTASELLNSLRLMFSRLGSHVCPNWHRTPASMAVAL 163 Query: 248 SANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPELSLAGGAI 307 CP+CG S +FN+ GACP C G G+ + D ++ + LS+ GA+ Sbjct: 164 MQPIVCPVCGESFYGPGAEAMAFNS-DGACPVCSGTGMVREVDDSTLVPDESLSIEDGAV 222 Query: 308 RGWDRRNFYYFQMLKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKENIEFKYMNDRGDT 367 W + + ++ P+ L+ +V G + + + + G Sbjct: 223 LPW---KLFGLIAMPKTVAELGVRIDVPFSELTEEERHIVFAGEETKKM-IVWHSKNGKV 278 Query: 368 SIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGTRLRREARHVYVENTP 427 + E ES +++ KF+ PC C+GTRL + R + Sbjct: 279 FELNCTYYNAHRAAENALHNVESEKGLDKIRKFLREAPCPECKGTRLSKAVRATTLAGKN 338 Query: 428 LPAISDMSIGHAMEFFNNLK--LAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTLSRSAE 485 L + +++ +++ +++ L+ + +A I+ + D + L ++GL YL+L R++ Sbjct: 339 LAEATALTLDELLQWVDSVPATLSPEMRPMALSIIGSLADNARRLKDLGLGYLSLDRASS 398 Query: 486 TLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVE 545 TLS GE QR++LA + +GV+YVLDEPSIGLH + + L+ + L GN+V++V+ Sbjct: 399 TLSTGERQRVQLARAVRNETLGVLYVLDEPSIGLHPSNIDGLMEVVNSLIADGNSVVLVD 458 Query: 546 HDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEVPKKRV 605 HD ++ AD++I++GP AG GG V+A+G +E I P S +++ + K+ Sbjct: 459 HDVHVLKRADYIIEMGPLAGNEGGTVIAQGSVEEIAQNPASKIAGFITETETVLTRKRAA 518 Query: 606 PAN--PEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLN 663 + + L + + + + + +P G T +TGVSGSGK+TL+ + L P Q Sbjct: 519 KKDLFANGTIHLETEQIHTVHALKVDIPKGRLTAVTGVSGSGKTTLVLENLIPALQAAAG 578 Query: 664 GATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESRA 723 G + P+ E +V ID +PIG RS ATY+G+ +R+LFAG ++ Sbjct: 579 GNKVP---PHVSKISAEGITRVNLIDAAPIGINVRSTIATYSGISDDLRKLFAGTKAAKE 635 Query: 724 RGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKYKGK 783 + T FS+N RC C G G I +++ FLPD+ + C C G R+ +E I + K Sbjct: 636 KKLTASEFSYNTGTLRCPTCDGTGQISLDVQFLPDVTITCPDCGGSRFGKEAESILWTPK 695 Query: 784 ------TIHEVLDMTIEEAREFFDA--VPALARKLQTLMDVGLTYIRLGQSATTLSGGEA 835 ++ E++ MT+ +A F A V +A L L ++GL Y+ LG+ LSGGEA Sbjct: 696 KSEQSYSLPELMRMTVRKALPVFSASGVHKIAENLSVLQNLGLGYLTLGEDTPALSGGEA 755 Query: 836 QRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVI 895 QR+KLA E+ K +++ DEPT GLH D+Q LL V H+L + G T+VVIEH+LDVI Sbjct: 756 QRLKLAAEMGKTQND-AVFVFDEPTIGLHPLDVQVLLGVFHRLVEAGATVVVIEHDLDVI 814 Query: 896 KTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLKPML 940 +D+I+D+GP GG+ GG+I+ GTPE + + AS T R+L +L Sbjct: 815 ANSDYIIDMGPGGGAAGGKIVAYGTPEEITQNPASITGRYLAEVL 859 Score = 174 bits (440), Expect = 2e-41, Method: Composition-based stats. Identities = 60/141 (42%), Positives = 89/141 (63%) Query: 3 KIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYAR 62 I ++GAR HNLKNI++ IP + L+ + G+SGSGKSSLA TLYAEG RRY+E+LS Y R Sbjct: 32 HISIKGARVHNLKNIDVDIPLEMLVAIAGVSGSGKSSLALGTLYAEGSRRYLEALSTYTR 91 Query: 63 QFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCPD 122 + ++ + D+D I + A+++ Q+ RST GT +E+ + LRL+F+R+G CP+ Sbjct: 92 RRITQSGRADIDEIHHIPAALALHQRPGIPGVRSTFGTASELLNSLRLMFSRLGSHVCPN 151 Query: 123 HDVPLAAQTVSQMVDNVLSQP 143 A+ V+ M V Sbjct: 152 WHRTPASMAVALMQPIVCPVC 172 Score = 81.2 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 44/199 (22%), Positives = 71/199 (35%), Gaps = 16/199 (8%) Query: 603 KRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQL 662 + + + + GAR +NLK++ + +P+ + I GVSGSGKS+L TL+ R+ Sbjct: 23 QHDKKTRPRHISIKGARVHNLKNIDVDIPLEMLVAIAGVSGSGKSSLALGTLYAEGSRRY 82 Query: 663 NGATIAEPAPYRDIQGLEHFDKVIDI------DQSPIGRTPRSNPATYTGVFTPVRELFA 716 A G D++ I Q P RS T + + +R +F+ Sbjct: 83 LEALSTYTRRRITQSGRADIDEIHHIPAALALHQRPGIPGVRSTFGTASELLNSLRLMFS 142 Query: 717 GVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKV-----EMHFLPDIYVPCDQCKGKRY 771 + + S V + C G M F D C C G Sbjct: 143 RLGSHVCPNWHRTPASMAVALMQPIVCPVCGESFYGPGAEAMAFNSD--GACPVCSGTGM 200 Query: 772 NRETLEIKYKG---KTIHE 787 RE + +I + Sbjct: 201 VREVDDSTLVPDESLSIED 219 Score = 80.0 bits (196), Expect = 4e-13, Method: Composition-based stats. Identities = 50/194 (25%), Positives = 72/194 (37%), Gaps = 35/194 (18%) Query: 3 KIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYAR 62 I + + H + + + IP+ +L VTG+SGSGK++L + L + +L A A Sbjct: 527 TIHLETEQIHTVHALKVDIPKGRLTAVTGVSGSGKTTLVLENL--------IPALQAAAG 578 Query: 63 QFLSLMEKPDVDHI--EGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFA------- 113 P V I EG++ I+ N RST+ T + I D LR LFA Sbjct: 579 ---GNKVPPHVSKISAEGITRVNLIDAAPIGINVRSTIATYSGISDDLRKLFAGTKAAKE 635 Query: 114 ----------RVGEPRCPDHDVPLAAQTVSQM---VDNVLSQPEGKRLMLLAP--IIKER 158 G RCP D Q V G R A + + Sbjct: 636 KKLTASEFSYNTGTLRCPTCDGTGQISLDVQFLPDVTITCPDCGGSRFGKEAESILWTPK 695 Query: 159 KGEHTKTLENLASQ 172 K E + +L L Sbjct: 696 KSEQSYSLPELMRM 709 >UniRef50_Q039P8 Excinuclease ATPase subunit n=56 Tax=Bacteria RepID=Q039P8_LACC3 Length = 760 Score = 606 bits (1563), Expect = e-171, Method: Composition-based stats. Identities = 251/813 (30%), Positives = 397/813 (48%), Gaps = 87/813 (10%) Query: 128 AAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARIDGEVCDLS 187 + V GK ++ I E + E +T + Q Y+ +V + Sbjct: 22 VKIPKDAISVFVGRSGSGKSSLVFDTIAAESRRELNETFPSFTQQ-YLPKYGQPDVGQID 80 Query: 188 DPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVADMDDPKAEELLF 247 P + +VV++ ++ + LA + L Sbjct: 81 HLP---------VAIVVEQKRIGKNARSTLA-----------------TYTGIYSLLRLL 114 Query: 248 SANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPELSLAGGAI 307 + P GYS FSFN P G C TC GLG D ++I +P SL GAI Sbjct: 115 FSRAGKPFIGYS------DTFSFNLPQGMCKTCQGLGYVDDIDVKKLI-DPNKSLNQGAI 167 Query: 308 RGWDRRNFYYFQMLKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKENIEFKYMNDRGDT 367 + K A FD + G + +LY + ++ Sbjct: 168 TFVSFGPDTWRW--KRYAYSGLFDNDKRLGDYTKQEMDTLLY------APQQTLDHAPTK 219 Query: 368 SIRRHPFEGVLHNMERRYK-ETESSAVREELAKFISNRPCASCEGTRLRREARHVYVENT 426 + +EGV+ + R + E+ + LA+ ++ PC +C GTRLR E + T Sbjct: 220 WPKTALYEGVVPRIRRSIIGKKEAEHHKTALAEIVTRMPCPTCHGTRLRPEVLTCLINQT 279 Query: 427 PLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTLSRSAET 486 + + M + F N + + + + +++E+ ++ L+++GL YL+L R ET Sbjct: 280 NIAQVLQMDLVKVRHFLNGI-----QEPLVQDVIRELLRKIDSLIDIGLGYLSLDRPTET 334 Query: 487 LSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEH 546 LSGGE QRI++A + + LV ++Y+LDEPS+GLH D E + ++ L++ GNT+++VEH Sbjct: 335 LSGGETQRIKIAKFLTSALVDMVYILDEPSVGLHPHDIELIKRAILRLKEKGNTILIVEH 394 Query: 547 DEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEVPKKRVP 606 + I D+++++GPGAG GG + G +A++ ++LTG+ + P+ Sbjct: 395 NPALIAIGDNIVEVGPGAGTTGGHITFTGTYQALLDS-DTLTGKLLKQPLTFRQPRPATS 453 Query: 607 ANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGAT 666 + L +NLKDV++ +P+G+ T I+GV+GSGKSTL++ Sbjct: 454 T-----ISLQHIHRHNLKDVSVAVPLGIETVISGVAGSGKSTLVSAL------------- 495 Query: 667 IAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESRARGY 726 RD + D + Q+ IG RS PATY + P+R++FA Sbjct: 496 -------RDQLTAPYID----LAQADIGANIRSAPATYLSILDPIRKVFADANH-----V 539 Query: 727 TPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKYKGKTIH 786 FS+N RG C C+G GV M F+ + C+QC G+RYN + L Y K I Sbjct: 540 ASSWFSYNGRGA-CPRCKGKGVTITNMAFMDPVVQTCEQCHGRRYNDQALSYTYHDKNIS 598 Query: 787 EVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSK 846 +VL M I +A+ FF VPA+A L+ + VGL Y+ LGQ TTLSGGE QR+KLA EL++ Sbjct: 599 DVLRMPITKAQNFFTDVPAIAAPLRNMARVGLDYLTLGQPLTTLSGGEKQRLKLAVELNR 658 Query: 847 RGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADWIVDLGP 906 G TLY+LDEPT GLH D+++L+ + +L GN+++++EHNL+VI ADW++D+GP Sbjct: 659 TG---TLYLLDEPTAGLHLQDVKKLIQLFDELVADGNSLIIVEHNLEVISQADWLIDMGP 715 Query: 907 EGGSGGGEILVSGTPETVAECEASHTARFLKPM 939 + G GG++ +GTPE + S T + +K Sbjct: 716 DAGIYGGQVRYTGTPENSMTVKQSRTGQAMKQY 748 Score = 169 bits (427), Expect = 6e-40, Method: Composition-based stats. Identities = 59/166 (35%), Positives = 86/166 (51%), Gaps = 17/166 (10%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 63 IEV A +NL+++N+ IP+D + V G SGSGKSSL FDT+ AE +R E+ ++ +Q Sbjct: 7 IEVHDANQNNLQHVNVKIPKDAISVFVGRSGSGKSSLVFDTIAAESRRELNETFPSFTQQ 66 Query: 64 FLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPR---- 119 +L +PDV I+ L AI +EQK N RST+ T T I+ LRLLF+R G+P Sbjct: 67 YLPKYGQPDVGQIDHLPVAIVVEQKRIGKNARSTLATYTGIYSLLRLLFSRAGKPFIGYS 126 Query: 120 -----------CPDHDVP--LAAQTVSQMVDNVLSQPEGKRLMLLA 152 C + V +++D S +G + Sbjct: 127 DTFSFNLPQGMCKTCQGLGYVDDIDVKKLIDPNKSLNQGAITFVSF 172 Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats. Identities = 97/447 (21%), Positives = 160/447 (35%), Gaps = 123/447 (27%) Query: 610 EKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAE 669 +++ A NNL+ V + +P + G SGSGKS+L+ DT+ ++R+LN + Sbjct: 4 HGFIEVHDANQNNLQHVNVKIPKDAISVFVGRSGSGKSSLVFDTIAAESRRELNETFPSF 63 Query: 670 PAPYRDIQGLEHFDKV------IDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESRA 723 Y G ++ I ++Q IG+ RS ATYTG+++ +R LF+ + Sbjct: 64 TQQYLPKYGQPDVGQIDHLPVAIVVEQKRIGKNARSTLATYTGIYSLLRLLFSRAG--KP 121 Query: 724 RGYTPGRFSFNVRGGRCEACQGDGVI-KVEMHFLPD------------IYVPCDQCKGKR 770 FSFN+ G C+ CQG G + +++ L D + D + KR Sbjct: 122 FIGYSDTFSFNLPQGMCKTCQGLGYVDDIDVKKLIDPNKSLNQGAITFVSFGPDTWRWKR 181 Query: 771 YNRETL---EIKYKGKTIHEVLDM------TIEEAREFFDA-------VPALAR-----K 809 Y L + + T E+ + T++ A + VP + R K Sbjct: 182 YAYSGLFDNDKRLGDYTKQEMDTLLYAPQQTLDHAPTKWPKTALYEGVVPRIRRSIIGKK 241 Query: 810 LQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILD------------ 857 L I T G R ++ L + + +D Sbjct: 242 EAEHHKTALAEIVTRMPCPTCH-GTRLRPEVLTCLINQTNIAQVLQMDLVKVRHFLNGIQ 300 Query: 858 EPTTGLHFADIQQLLDVLHKLRDQGNT-------------------------------IV 886 EP L I++LL + L D G +V Sbjct: 301 EP---LVQDVIRELLRKIDSLIDIGLGYLSLDRPTETLSGGETQRIKIAKFLTSALVDMV 357 Query: 887 VI---------EHNLDVIKTA------------------------DWIVDLGPEGGSGGG 913 I H++++IK A D IV++GP G+ GG Sbjct: 358 YILDEPSVGLHPHDIELIKRAILRLKEKGNTILIVEHNPALIAIGDNIVEVGPGAGTTGG 417 Query: 914 EILVSGTPETVAECEASHTARFLKPML 940 I +GT + + + + T + LK L Sbjct: 418 HITFTGTYQALLDS-DTLTGKLLKQPL 443 Score = 73.9 bits (180), Expect = 3e-11, Method: Composition-based stats. Identities = 37/160 (23%), Positives = 56/160 (35%), Gaps = 44/160 (27%) Query: 3 KIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYAR 62 I ++ HNLK++++ +P V++G++GSGKS+L + R Sbjct: 454 TISLQHIHRHNLKDVSVAVPLGIETVISGVAGSGKSTLV-----------------SALR 496 Query: 63 QFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARV------- 115 L +P I + Q N RS T I D +R +FA Sbjct: 497 DQL-------------TAPYIDLAQADIGANIRSAPATYLSILDPIRKVFADANHVASSW 543 Query: 116 ----GEPRCPDHDVPLAAQTVSQMVDNV---LSQPEGKRL 148 G CP T +D V Q G+R Sbjct: 544 FSYNGRGACPRCKGKGVTITNMAFMDPVVQTCEQCHGRRY 583 >UniRef50_A6TUU6 ABC transporter related n=1 Tax=Alkaliphilus metalliredigens QYMF RepID=A6TUU6_ALKMQ Length = 842 Score = 605 bits (1561), Expect = e-171, Method: Composition-based stats. Identities = 258/680 (37%), Positives = 408/680 (60%), Gaps = 14/680 (2%) Query: 252 ACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPELSLAGGAIRGW- 310 C CG + + P++FS+N+P CP C GLGV+ D ++++++PE SL GA + Sbjct: 156 VCKDCGAILFDRTPQVFSYNHPDYMCPLCKGLGVEMRIDEEKIVEHPEKSLLDGASSLYG 215 Query: 311 -------DRRNFYYFQMLKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKENIEFKYMND 363 + + +LAD D+E P+ L + YGS + Y N Sbjct: 216 DLRKHRKKPNANWMRGEILALADDMNVDLELPFYRLPKEFKQQFFYGSNGREVSLAYENS 275 Query: 364 RGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGTRLRREARHVYV 423 +G + + R P EG ++ ++R +T+++ +++ +F+S + C+ C+G RL E R V + Sbjct: 276 KGRSGVIRRPVEGAINLIQRLAHDTKATRSTDQVHQFMSKKTCSCCQGERLLEEGRLVNI 335 Query: 424 ENTPLPAISDMSIGHAMEFFNNL--KLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTLS 481 + P + +SI ++ + + +L ++ I ++ RLK + +VGL Y+TL+ Sbjct: 336 QGYRYPEVVSLSIDKLRKWCHRIYEQLIKEQQDKTRMIFIKLNQRLKKIQSVGLGYITLN 395 Query: 482 RSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTV 541 RS +LSGGEAQR++LA+Q G GL ++Y++DEPS GLH +D L+ ++ L+ GNTV Sbjct: 396 RSVPSLSGGEAQRLKLATQFGTGLSNILYIMDEPSKGLHPKDYRFLMDAIVDLKKYGNTV 455 Query: 542 IVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAV--PESLTGQYMSGKRKIE 599 I+VEH + + AD + +GP AG +GGE+V + I + + + + K Sbjct: 456 ILVEHKKSFLTIADMHLHMGPKAGRYGGELVFVHHRKEIENQLISQDCSDDFDTIKVIDS 515 Query: 600 VPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQ 659 V A + ++L G NNLK++ + +P+G+ T + GVSGSGKSTLI+ TL+P Sbjct: 516 VSLDNNKAIKDTYIQLKGVTTNNLKNIDVAIPIGMMTAVIGVSGSGKSTLISKTLYPYIM 575 Query: 660 RQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVP 719 L G T+ E ++ + G+E F+ V ++Q IG RSNP TYTGVF +R+ +A Sbjct: 576 SSL-GRTVEEKGTFQKVIGIESFEDVCYVNQKAIGSNSRSNPGTYTGVFDLIRQCYADTQ 634 Query: 720 ESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIK 779 +++ + + FSFN + G+C C G G + V MH++ ++YVPC++C GKRY++E L+I Sbjct: 635 QAKKKNLSKEYFSFNSKKGQCPECSGLGEVAVNMHYMDNLYVPCNKCHGKRYSKEVLKIT 694 Query: 780 YKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVK 839 K +I ++LD+ I + E F + R+L L VGL Y++LGQSA+TLSGGEAQR+K Sbjct: 695 RKDCSIGDILDIEIHDLLEVFQEEKEIVRQLSMLNKVGLGYLKLGQSASTLSGGEAQRIK 754 Query: 840 LARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTAD 899 LA+EL+K LYILDEPTTGLH D+++++DVL +L+++G TI++IEHNL +IK D Sbjct: 755 LAKELNKNECKNILYILDEPTTGLHEEDVEKVIDVLKELKEKGATIIIIEHNLKMIKKCD 814 Query: 900 WIVDLGPEGGSGGGEILVSG 919 +IV+LGP GG GG IL +G Sbjct: 815 YIVELGP-GGVQGGHILQAG 833 Score = 159 bits (403), Expect = 4e-37, Method: Composition-based stats. Identities = 56/130 (43%), Positives = 86/130 (66%), Gaps = 1/130 (0%) Query: 3 KIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYAR 62 +I V AR HNLKN+++ I ++ +I++TG+SGSGKSSLAFDT++ E Q+++++ L + Sbjct: 28 EIHVHNARIHNLKNVSVSILKNSIILITGVSGSGKSSLAFDTIFTESQKQFMD-LVLSNQ 86 Query: 63 QFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCPD 122 + VD I GL P+I+IEQ++ NPRSTVG++T+I D +LLFA +G+ CP Sbjct: 87 MLNNTFSDVYVDKITGLQPSIAIEQRNLGVNPRSTVGSVTKIADVFKLLFATIGKRVCPW 146 Query: 123 HDVPLAAQTV 132 + V Sbjct: 147 CHQVVDDSNV 156 Score = 90.4 bits (223), Expect = 3e-16, Method: Composition-based stats. Identities = 39/111 (35%), Positives = 56/111 (50%), Gaps = 7/111 (6%) Query: 3 KIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYAR 62 I+++G T+NLKNI++ IP + V G+SGSGKS+L TLY Y+ +S+ R Sbjct: 528 YIQLKGVTTNNLKNIDVAIPIGMMTAVIGVSGSGKSTLISKTLYP-----YI--MSSLGR 580 Query: 63 QFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFA 113 V IE + QK+ N RS GT T + D +R +A Sbjct: 581 TVEEKGTFQKVIGIESFEDVCYVNQKAIGSNSRSNPGTYTGVFDLIRQCYA 631 Score = 77.0 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 48/182 (26%), Positives = 78/182 (42%), Gaps = 30/182 (16%) Query: 610 EKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAE 669 + + + AR +NLK+V++++ ITGVSGSGKS+L DT+F +Q+Q ++ Sbjct: 26 NQEIHVHNARIHNLKNVSVSILKNSIILITGVSGSGKSSLAFDTIFTESQKQFMDLVLSN 85 Query: 670 PAPYRDIQGLEHFDKV------IDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPE--- 720 + + DK+ I I+Q +G PRS + T + + LFA + + Sbjct: 86 QMLNNTFSDV-YVDKITGLQPSIAIEQRNLGVNPRSTVGSVTKIADVFKLLFATIGKRVC 144 Query: 721 -----------------SRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPC 763 + TP FS+N C C+G G VEM + V Sbjct: 145 PWCHQVVDDSNVCKDCGAILFDRTPQVFSYNHPDYMCPLCKGLG---VEMRIDEEKIVEH 201 Query: 764 DQ 765 + Sbjct: 202 PE 203 >UniRef50_C1B8F2 UvrA-like protein n=57 Tax=Bacteria RepID=C1B8F2_RHOOB Length = 806 Score = 603 bits (1555), Expect = e-171, Method: Composition-based stats. Identities = 275/861 (31%), Positives = 404/861 (46%), Gaps = 113/861 (13%) Query: 105 HDYLRLLFARVGEPRCPDHDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTK 164 HD +R+ AR + ++P TV V GK ++ A I E + + Sbjct: 30 HDLIRVHGARENNLKDISVELPKRRLTVFTGVS-----GSGKSSLVFATIAAESQRMINE 84 Query: 165 TLENLASQGYIR--ARIDGEVCD------LSDPPKLELQKKHTIEVVVDRFKVRDDLTQR 216 T QG++ AR D +V D + D ++ + T+ D + L R Sbjct: 85 TYSAFV-QGFMPTLARPDVDVLDGLTTAIIVDQERMGSNPRSTVGTATDANAMLRILFSR 143 Query: 217 LAES---------FETALELSGGTAVVADMDDPKAEELLFSANFACPICGYSMRELEPRL 267 L + F A G + E Sbjct: 144 LGKPHIGSPQAFSFNVASISGAGAVTIERGGQQIKERR---------------------- 181 Query: 268 FSFNNPAGACPTCDGLGVQQYFDPDRVIQNPELSLAGGAIRGWDRR-NFYYFQMLKSLAD 326 SF+ G CP C+G G FD + + SL GA+ +Y ++ + Sbjct: 182 -SFSLTGGMCPRCEGRGSVTDFDLTALYDD-SKSLNEGALTIPGYSMEGWYGRIYRGC-- 237 Query: 327 HYKFDVEAPWGSLSANVHKVVLYGSGKENIEFKYMNDRGDTSIRRHPFEGVLHNMERRYK 386 FD + P + + +LY + FEG++ +++ + Sbjct: 238 -GFFDPDKPIAKFTKKQLQDLLYKEPTKI----------KVEGVNITFEGLIPKIQKSFL 286 Query: 387 ETE----SSAVREELAKFISNRPCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEF 442 + +R + + I+ C CEGTRL AR ++ + + M I ++ Sbjct: 287 AKDVDAMQPHIRAFVERAITFATCPDCEGTRLSEGARSSKIKGKNIADVCSMQISDLADW 346 Query: 443 FNNLKLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIG 502 LK +L + L +GL YL+L R + TLSGGEAQR ++ +G Sbjct: 347 VRGLK-----EPSVAPLLTGLQHLLDSFTEIGLGYLSLDRPSGTLSGGEAQRTKMIRHLG 401 Query: 503 AGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGP 562 + L V YV DEP+IGLH D +R+ G L+ LRD GNTV+VVEH +AI ADHV+D+GP Sbjct: 402 SSLTDVTYVFDEPTIGLHPHDIQRMNGLLLQLRDKGNTVLVVEHKPEAIAIADHVVDLGP 461 Query: 563 GAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEVPKKRVPANPEKVLKLTGARGNN 622 AG GGEVV EG +E + ++LTG+++ + + K L++ GA +N Sbjct: 462 RAGTEGGEVVFEGTVEG-LRASDTLTGRHLDDRATL----KSSVRESSGALEVRGADTHN 516 Query: 623 LKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAEPAPYRDIQGLEHF 682 L V + +P+G+ +TGV+GSGKS+LI+ ++ Sbjct: 517 LCGVDVDIPLGMLVVVTGVAGSGKSSLIHGSVADR------------------------- 551 Query: 683 DKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESRARGYTPGRFSFNVRGGRCEA 742 D V+ IDQ I + RSNPATYTG+ P+R+ FA +A G P FS N G C Sbjct: 552 DGVVAIDQGAIKGSRRSNPATYTGLLEPIRKAFA-----KANGVKPALFSSNSEGA-CPT 605 Query: 743 CQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFF-- 800 C G GVI ++ + + PC++C+GKR+ E LE K G+ I EVL M + EA EFF Sbjct: 606 CNGAGVIYTDLGVMATVESPCEECEGKRFQAEVLEFKLGGRNIAEVLAMPVAEAEEFFGA 665 Query: 801 --DAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDE 858 +PA + LQ L DVGL Y+ LGQ TTLSGGE QR+KLA ++ +G +Y+LDE Sbjct: 666 GEARIPAAHKILQRLADVGLGYLSLGQPLTTLSGGERQRLKLATAMADKG---EIYVLDE 722 Query: 859 PTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVS 918 PTTGLH AD++QLL +L +L D G +++VIEH+ V+ ADWI+DLGP G GG I+ Sbjct: 723 PTTGLHLADVEQLLGLLDRLVDSGKSVIVIEHHQAVMAHADWIIDLGPGAGHDGGRIVFE 782 Query: 919 GTPETVAECEASHTARFLKPM 939 G PE + ++ T L Sbjct: 783 GRPEDLVADASTLTGEHLAAY 803 Score = 168 bits (425), Expect = 1e-39, Method: Composition-based stats. Identities = 58/118 (49%), Positives = 85/118 (72%) Query: 2 DKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYA 61 D I V GAR +NLK+I++ +P+ +L V TG+SGSGKSSL F T+ AE QR E+ SA+ Sbjct: 31 DLIRVHGARENNLKDISVELPKRRLTVFTGVSGSGKSSLVFATIAAESQRMINETYSAFV 90 Query: 62 RQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPR 119 + F+ + +PDVD ++GL+ AI ++Q+ NPRSTVGT T+ + LR+LF+R+G+P Sbjct: 91 QGFMPTLARPDVDVLDGLTTAIIVDQERMGSNPRSTVGTATDANAMLRILFSRLGKPH 148 Score = 89.3 bits (220), Expect = 6e-16, Method: Composition-based stats. Identities = 56/198 (28%), Positives = 84/198 (42%), Gaps = 12/198 (6%) Query: 583 VPESLTGQYMSGKRKIEVPKKRVP-ANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGV 641 P + T KR+ + A+ ++++ GAR NNLKD+++ LP T TGV Sbjct: 2 SPATKTATTGRAKRREASESPDLHLADSHDLIRVHGARENNLKDISVELPKRRLTVFTGV 61 Query: 642 SGSGKSTLINDTLFPIAQRQLNGATIAEPAPYRDIQGLEHFD------KVIDIDQSPIGR 695 SGSGKS+L+ T+ +QR +N A + D I +DQ +G Sbjct: 62 SGSGKSSLVFATIAAESQRMINETYSAFVQGFMPTLARPDVDVLDGLTTAIIVDQERMGS 121 Query: 696 TPRSNPATYTGVFTPVRELFAGVPESRARGYTPGRFSFNVR---GGRCEACQGDGVIKVE 752 PRS T T +R LF+ + + +P FSFNV G + G E Sbjct: 122 NPRSTVGTATDANAMLRILFSRLG--KPHIGSPQAFSFNVASISGAGAVTIERGGQQIKE 179 Query: 753 MHFLPDIYVPCDQCKGKR 770 C +C+G+ Sbjct: 180 RRSFSLTGGMCPRCEGRG 197 Score = 86.6 bits (213), Expect = 5e-15, Method: Composition-based stats. Identities = 45/179 (25%), Positives = 69/179 (38%), Gaps = 45/179 (25%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 63 +EVRGA THNL +++ IP L+VVTG++GSGKSSL ++ Sbjct: 507 LEVRGADTHNLCGVDVDIPLGMLVVVTGVAGSGKSSLIHGSVA----------------- 549 Query: 64 FLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVG------- 116 D D + ++I+Q + + RS T T + + +R FA+ Sbjct: 550 --------DRDGV------VAIDQGAIKGSRRSNPATYTGLLEPIRKAFAKANGVKPALF 595 Query: 117 ----EPRCPDHDVPLAAQTVSQMVDNV---LSQPEGKRLMLLAPIIKERKGEHTKTLEN 168 E CP + T ++ V + EGKR K + L Sbjct: 596 SSNSEGACPTCNGAGVIYTDLGVMATVESPCEECEGKRFQAEVLEFKLGGRNIAEVLAM 654 >UniRef50_C9XKB3 Putative antibiotic resistance ABC transporter, ATP-binding protein n=4 Tax=Clostridium difficile RepID=C9XKB3_CLODC Length = 747 Score = 601 bits (1550), Expect = e-170, Method: Composition-based stats. Identities = 280/812 (34%), Positives = 421/812 (51%), Gaps = 96/812 (11%) Query: 134 QMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARIDGEVCDLSDPPKLE 193 ++V GK ++ I E + + +T + +IR R+ P++E Sbjct: 25 KIVVFTGVSGSGKSSIVFDTIAAESQRQMNETYSS-----FIRNRL-----PKYRKPQVE 74 Query: 194 LQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVADMDDPKAEELLFSANFAC 253 L T V+VD+ + + V + D + L + Sbjct: 75 LIDNLTASVIVDQTPLG-----------------GNARSTVGTISDLYSSLRLLFSRIGE 117 Query: 254 PICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPELSLAGGAI-RGWDR 312 P G + FSFN+P G C C G+G + + + +I NPE S G I + Sbjct: 118 PYIGTT------SYFSFNDPNGMCKNCSGIGRVKVINIESII-NPENSWNTGCINDSLFK 170 Query: 313 RNFYYFQMLKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKENIEFKYMNDRGDTSIRRH 372 N +Y+ K A+ FD++ P S + ++LYGS + D Sbjct: 171 PNSWYW---KQYAESGLFDLDKPIKDYSFEEYNLLLYGSKNK-----------DGKQENP 216 Query: 373 PFEGVLHNMERRYKETE----SSAVREELAKFISNRPCASCEGTRLRREARHVYVENTPL 428 EG+ + + Y + S +E+ + I+++ C C G RL +E + + + Sbjct: 217 KIEGIFNKYNQTYLNRDISNMSKHTKEKSERLITDKECPVCHGKRLNKETLNCNILGYSI 276 Query: 429 PAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTLSRSAETLS 488 + +M + + +K K E ++K + D LK ++++GL YL L+R + +LS Sbjct: 277 ADMCNMELTDLYDLLLQIK-----DKRTETVIKTLTDGLKRMIDIGLPYLHLNRESSSLS 331 Query: 489 GGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDE 548 GGEAQR++L +G+ L G+ Y+ DEPS G+H RD R+ L LRD GNTV+VVEHD+ Sbjct: 332 GGEAQRLKLVRYMGSSLTGMTYIFDEPSAGMHPRDVHRMNQLLKKLRDRGNTVLVVEHDK 391 Query: 549 DAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEVPKKRVPAN 608 D I AD VIDIGP AG GG VV +G + ++ +LT M + +P K + Sbjct: 392 DVISIADEVIDIGPSAGTQGGHVVFQGSYDKLLLA-NTLTSNAM----NLSLPIKTDSRH 446 Query: 609 PEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIA 668 P+ L + A NNLK + + LPVG+ T +TGV+GSGKSTLI+ ++ Sbjct: 447 PKGTLPIRDACINNLKHIDVDLPVGIMTVVTGVAGSGKSTLISRVFAQKYEK-------- 498 Query: 669 EPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESRARGYTP 728 VI IDQSP+ T RS PAT+ G F +R++FA + Sbjct: 499 ---------------DVIKIDQSPVTATNRSMPATFLGFFDEIRKVFA-----KENNVEE 538 Query: 729 GRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKYKGKTIHEV 788 G FSFN +G C C G GV+ E+ F+ I C+ CKG RY+ E L YKGK I +V Sbjct: 539 GLFSFNSKGA-CPVCDGKGVLVTELVFMDPIINTCEACKGTRYSEEVLSKLYKGKCIVDV 597 Query: 789 LDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRG 848 L MT++E+ EFF L + LQT+ DVGL Y+ LGQ +TLSGGE QR+KLA+ L+K+G Sbjct: 598 LSMTVDESLEFFTE-KKLCKILQTMKDVGLPYMTLGQPLSTLSGGERQRIKLAKNLNKKG 656 Query: 849 TGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADWIVDLGPEG 908 T+YILDEPTTGLH +DI++L+ + + D+GNT+++IEHNLDV+K ADW++D+GP+G Sbjct: 657 ---TIYILDEPTTGLHGSDIEKLMLIFEHIVDKGNTVIIIEHNLDVLKQADWVIDIGPDG 713 Query: 909 GSGGGEILVSGTPETVAECEASHTARFLKPML 940 G GG+++ GTP + E + T+ FL+ + Sbjct: 714 GKNGGQVVFEGTPLEMFERGCTITSDFLRKSI 745 Score = 179 bits (453), Expect = 6e-43, Method: Composition-based stats. Identities = 55/119 (46%), Positives = 83/119 (69%) Query: 1 MDKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAY 60 M I ++G +NLKNI+ IP++K++V TG+SGSGKSS+ FDT+ AE QR+ E+ S++ Sbjct: 1 MSNIIIKGLTQNNLKNISFKIPKNKIVVFTGVSGSGKSSIVFDTIAAESQRQMNETYSSF 60 Query: 61 ARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPR 119 R L KP V+ I+ L+ ++ ++Q N RSTVGTI++++ LRLLF+R+GEP Sbjct: 61 IRNRLPKYRKPQVELIDNLTASVIVDQTPLGGNARSTVGTISDLYSSLRLLFSRIGEPY 119 Score = 99.7 bits (247), Expect = 5e-19, Method: Composition-based stats. Identities = 44/143 (30%), Positives = 71/143 (49%), Gaps = 8/143 (5%) Query: 615 LTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAEPAPYR 674 + G NNLK+++ +P TGVSGSGKS+++ DT+ +QRQ+N + Sbjct: 6 IKGLTQNNLKNISFKIPKNKIVVFTGVSGSGKSSIVFDTIAAESQRQMNETYSSFIRNRL 65 Query: 675 DIQGLEHFDKV------IDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESRARGYTP 728 + + + +DQ+P+G RS T + +++ +R LF+ + E T Sbjct: 66 PKYRKPQVELIDNLTASVIVDQTPLGGNARSTVGTISDLYSSLRLLFSRIGEPYIG--TT 123 Query: 729 GRFSFNVRGGRCEACQGDGVIKV 751 FSFN G C+ C G G +KV Sbjct: 124 SYFSFNDPNGMCKNCSGIGRVKV 146 Score = 81.2 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 40/169 (23%), Positives = 64/169 (37%), Gaps = 45/169 (26%) Query: 6 VRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQFL 65 +R A +NLK+I++ +P + VVTG++GSGKS+L +R F Sbjct: 453 IRDACINNLKHIDVDLPVGIMTVVTGVAGSGKSTLI-------------------SRVFA 493 Query: 66 SLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVG--------- 116 EK I I+Q + RS T D +R +FA+ Sbjct: 494 QKYEKD----------VIKIDQSPVTATNRSMPATFLGFFDEIRKVFAKENNVEEGLFSF 543 Query: 117 --EPRCPDHDVPLAAQTVSQMVDNV---LSQPEGKRL--MLLAPIIKER 158 + CP D T +D + +G R +L+ + K + Sbjct: 544 NSKGACPVCDGKGVLVTELVFMDPIINTCEACKGTRYSEEVLSKLYKGK 592 >UniRef50_A5LJ87 Excinuclease ABC subunit A n=13 Tax=Bacilli RepID=A5LJ87_STRPN Length = 525 Score = 601 bits (1549), Expect = e-170, Method: Composition-based stats. Identities = 253/494 (51%), Positives = 335/494 (67%), Gaps = 7/494 (1%) Query: 2 DKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYA 61 DKI + GAR HNLKNI++ IPRDKL+VVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYA Sbjct: 3 DKIVIHGARAHNLKNIDVEIPRDKLVVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYA 62 Query: 62 RQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCP 121 RQFL MEKPDVD I+GLSPAISI+QK+TS NPRSTVGT TEI+DYLRLL+ARVG P C Sbjct: 63 RQFLGNMEKPDVDAIDGLSPAISIDQKTTSKNPRSTVGTTTEINDYLRLLYARVGTPYCI 122 Query: 122 DHDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARIDG 181 + + A +V Q+VD VL PE +RL +LAP+I+++KG+H +E + GY+R R+DG Sbjct: 123 NGHGAINASSVEQIVDKVLELPERQRLQILAPVIRKKKGQHKSVIEKVQKDGYVRVRVDG 182 Query: 182 EVCDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVADMDDPK 241 EV D+++ P+L K+H I+VVVDR +++ + RL +S E AL ++ G ++ MDD Sbjct: 183 EVYDVTEVPELSKSKQHNIDVVVDRIVIKEGIRSRLFDSIEAALRIAEGYVIIDTMDD-- 240 Query: 242 AEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPELS 301 ELLFS ++ACP+CG+++ ELEPRLFSFN P G+C CDGLG++ D D V+ + + Sbjct: 241 -SELLFSEHYACPVCGFTVPELEPRLFSFNAPFGSCSECDGLGIKLEVDTDLVVPDASKT 299 Query: 302 LAGGAIRGWDR-RNFYYFQMLKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKENIEFKY 360 L GA+ W+ + YY ML+ + ++ P+ LS ++LYGS + F Y Sbjct: 300 LREGALAPWNPISSNYYPNMLEQAMKVFGVAMDKPFEDLSEEDKNLILYGSDGKEFHFHY 359 Query: 361 MNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGTRLRREARH 420 N+ G PFEGV++N++RRY ET S R ++ +++ C +C+G RL +A Sbjct: 360 ENEFGGVRDIDIPFEGVINNIKRRYHETNSDYTRTQMRLYMNELTCGTCQGYRLNDQALS 419 Query: 421 VYVENT---PLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNVGLNY 477 V V + ISD+SI ++ + L L+ A IA ILKEI DRL FL NVGLNY Sbjct: 420 VRVGGQQGPHIGEISDLSIADHLDLVSQLTLSENEAIIARPILKEIKDRLTFLNNVGLNY 479 Query: 478 LTLSRSAETLSGGE 491 LTLSRSA T G+ Sbjct: 480 LTLSRSAGTFQVGK 493 Score = 83.1 bits (204), Expect = 5e-14, Method: Composition-based stats. Identities = 36/117 (30%), Positives = 56/117 (47%), Gaps = 6/117 (5%) Query: 609 PEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIA 668 + + + GAR +NLK++ + +P +TG+SGSGKS+L DTL+ QR+ + A Sbjct: 1 MQDKIVIHGARAHNLKNIDVEIPRDKLVVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSA 60 Query: 669 EPAPYRDIQGLEHFDKV------IDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVP 719 + D + I IDQ + PRS T T + +R L+A V Sbjct: 61 YARQFLGNMEKPDVDAIDGLSPAISIDQKTTSKNPRSTVGTTTEINDYLRLLYARVG 117 >UniRef50_C7PP78 ABC transporter related n=6 Tax=Bacteria RepID=C7PP78_CHIPD Length = 754 Score = 600 bits (1548), Expect = e-170, Method: Composition-based stats. Identities = 256/810 (31%), Positives = 399/810 (49%), Gaps = 89/810 (10%) Query: 134 QMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARIDGEVCDLSDPPKLE 193 ++V GK ++ I E + + +T + R R+ P ++ Sbjct: 29 RIVVFTGVSGSGKSSLVFETIGAEAQRQVNET-----QHSFTRNRL-----SHLGIPDVD 78 Query: 194 LQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVADMDDPKAEELLFSANFAC 253 + + V++ + ++ + V D A L + Sbjct: 79 KIEHLNVPVIISQKRIG-----------------GNARSTVGTATDIYASLRLLFSRMGN 121 Query: 254 PICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPELSLAGGAIRGWDRR 313 P GYS +FSFN+P G CPTC+GLG + D ++ + + SL G I + Sbjct: 122 PFVGYS------SIFSFNHPQGMCPTCEGLGFISTINTDALL-DKDKSLNEGPILFPTFQ 174 Query: 314 NFYYFQMLKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKENIEFKYMNDRGDTSIRRHP 373 Y + A FD + S E + + Sbjct: 175 PGGYRWI--RYAHSGYFDRDKKLRDYSKKEL------ELLLYAEEHKPPHPDKSWGKTMQ 226 Query: 374 FEGVLHNMERRYKETESSAV---REELAKFISNRPCASCEGTRLRREARHVYVENTPLPA 430 + G+L ++ + + ES ++EL K I+ C C+G RL + ++ + Sbjct: 227 YIGLLPRIKNDFLKKESKEHHLRKKELQKIINTVSCPDCKGKRLNKTVLSCKIKGMDIAD 286 Query: 431 ISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTLSRSAETLSGG 490 S M +G + F + L +K I E+ +L+ +V +GL YLTL R+ +TLSGG Sbjct: 287 CSAMPVGELLAFIHTLS-----SKSFSAIRYELQKKLENVVTIGLQYLTLDRTTDTLSGG 341 Query: 491 EAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDA 550 E+QRI++ +G + ++Y+ DEPSIGLH +D + + + +++ GN+V++VEHD D Sbjct: 342 ESQRIKMVRHLGNSIEDLLYIFDEPSIGLHAKDLDNISKIIRKIKEKGNSVLIVEHDPDI 401 Query: 551 IRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEVPKKRVPANPE 610 I+ ADHVID+GP +GVHGGE++ EG + ++A TG+Y S KR + P + Sbjct: 402 IKIADHVIDVGPLSGVHGGEIIYEGSFKGLLASKGK-TGKYFSQKRT----YRDNPRTAQ 456 Query: 611 KVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAEP 670 +++ A NLK++T+ +P + T +TGV+GSGKSTLI L Sbjct: 457 TSIRIENASLFNLKNITVDIPRNVLTVVTGVAGSGKSTLIGKVLPL-------------- 502 Query: 671 APYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESRARGYTPGR 730 +V I+QSPI + RS TY + +R LFA + R Sbjct: 503 ----------QLPEVKIINQSPITGSQRSTLLTYLDLSDKLRRLFASANKVSDR-----L 547 Query: 731 FSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKYKGKTIHEVLD 790 FS N G C C+G GV K+++ F+ DI PCD C G ++ + L+ K+ K I EVL+ Sbjct: 548 FSTNS-LGACPDCKGLGVEKIDLAFMDDIEQPCDVCHGTGFDPKVLKYKFLHKNIAEVLN 606 Query: 791 MTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTG 850 +T+EEA FF+ + + L+ +GL Y++LGQ +T SGGE QR+KL+ EL++ Sbjct: 607 LTVEEAMTFFEQYDFVTH-FELLIALGLGYLKLGQRLSTFSGGERQRLKLSAELAEAN-- 663 Query: 851 QTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADWIVDLGPEGGS 910 + +LDEP+TGLH AD QLL VL +L +QGNT++VIEHNLDVI ADWI+D+GP G Sbjct: 664 -KILVLDEPSTGLHPADTGQLLQVLDRLVEQGNTVIVIEHNLDVIAQADWILDIGPGAGK 722 Query: 911 GGGEILVSGTPETVAECEASHTARFLKPML 940 GGE++ G + E + S TA++LK L Sbjct: 723 YGGELVFQGNVRQLLENKVSETAKYLKQHL 752 Score = 192 bits (489), Expect = 5e-47, Method: Composition-based stats. Identities = 72/188 (38%), Positives = 100/188 (53%), Gaps = 24/188 (12%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 63 I+V GAR +NLKNI+L IP+ +++V TG+SGSGKSSL F+T+ AE QR+ E+ ++ R Sbjct: 8 IKVSGARQNNLKNISLEIPKGRIVVFTGVSGSGKSSLVFETIGAEAQRQVNETQHSFTRN 67 Query: 64 FLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPR---- 119 LS + PDVD IE L+ + I QK N RSTVGT T+I+ LRLLF+R+G P Sbjct: 68 RLSHLGIPDVDKIEHLNVPVIISQKRIGGNARSTVGTATDIYASLRLLFSRMGNPFVGYS 127 Query: 120 -----------CPDHDVP--LAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTL 166 CP + ++ ++D S EG +L P + Sbjct: 128 SIFSFNHPQGMCPTCEGLGFISTINTDALLDKDKSLNEGP---ILFPTFQPGGYRWI--- 181 Query: 167 ENLASQGY 174 A GY Sbjct: 182 -RYAHSGY 188 Score = 111 bits (277), Expect = 1e-22, Method: Composition-based stats. Identities = 53/152 (34%), Positives = 79/152 (51%), Gaps = 8/152 (5%) Query: 606 PANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGA 665 + +++K++GAR NNLK+++L +P G TGVSGSGKS+L+ +T+ AQRQ+N Sbjct: 1 MKSNNRMIKVSGARQNNLKNISLEIPKGRIVVFTGVSGSGKSSLVFETIGAEAQRQVNET 60 Query: 666 TIAEPAPYRDIQGLEHFDKV------IDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVP 719 + G+ DK+ + I Q IG RS T T ++ +R LF+ + Sbjct: 61 QHSFTRNRLSHLGIPDVDKIEHLNVPVIISQKRIGGNARSTVGTATDIYASLRLLFSRMG 120 Query: 720 ESRARGYTPGRFSFNVRGGRCEACQGDGVIKV 751 GY+ FSFN G C C+G G I Sbjct: 121 NP-FVGYS-SIFSFNHPQGMCPTCEGLGFIST 150 Score = 85.8 bits (211), Expect = 8e-15, Method: Composition-based stats. Identities = 45/178 (25%), Positives = 67/178 (37%), Gaps = 41/178 (23%) Query: 3 KIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYAR 62 I + A NLKNI + IPR+ L VVTG++GSGKS+L L Sbjct: 458 SIRIENASLFNLKNITVDIPRNVLTVVTGVAGSGKSTLIGKVL----------------- 500 Query: 63 QFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPR--- 119 ++ P+V I Q + + RST+ T ++ D LR LFA + Sbjct: 501 ----PLQLPEVK---------IINQSPITGSQRSTLLTYLDLSDKLRRLFASANKVSDRL 547 Query: 120 --------CPDHDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENL 169 CPD + +D++ + P + + K H E L Sbjct: 548 FSTNSLGACPDCKGLGVEKIDLAFMDDIEQPCDVCHGTGFDPKVLKYKFLHKNIAEVL 605 >UniRef50_C2HBQ4 Excinuclease subunit A n=4 Tax=Enterococcus faecium RepID=C2HBQ4_ENTFC Length = 743 Score = 596 bits (1536), Expect = e-168, Method: Composition-based stats. Identities = 270/834 (32%), Positives = 411/834 (49%), Gaps = 98/834 (11%) Query: 106 DYLRLLFARVGEPRCPDHDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKT 165 +Y+ L+ AR + D +P T+ V GK ++ I +E + +T Sbjct: 3 EYIELIHARENNLKNIDLRIPKNKITIFTGVS-----GSGKSSIVFDTIAQEAGRQLNET 57 Query: 166 LENLASQGYIRARIDGEVCDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETAL 225 + A L + I+ +++ T L Sbjct: 58 FNSFAR------------------NFLPKYSRPDID------EIKHLSTAVL---INQKK 90 Query: 226 ELSGGTAVVADMDDPKAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGV 285 + + D +A + + FA P GY +SFN+P G CP C G+G Sbjct: 91 LGGNARSTLGTATDIQALFRILFSRFAEPPLGY------ANAYSFNDPQGMCPVCQGIGK 144 Query: 286 QQYFDPDRVIQNPELSLAGGAIR-GWDRRNFYYFQMLKSLADHYKFDVEAPWGSLSANVH 344 + D + + SL GAI +Y++M A+ FD P ++ + Sbjct: 145 TITLNIDAAV-DVTRSLNEGAILLPNFTVGTWYWKM---YAETGLFDPNKPISEYTSEEY 200 Query: 345 KVVLYGSGKENIEFKYMNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREE---LAKFI 401 +LYG E I D +EG++ R TE ++ L + Sbjct: 201 DRLLYGK-AERINIPSAGD------MNVTYEGIVTRFMRTNVHTEKETTKKTAKVLETYT 253 Query: 402 SNRPCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILK 461 C C+G R E + + + ++ + ++ L K ++ Sbjct: 254 KMDTCPECQGKRFSHEVLNSKINGYNIYDLTAKELSSLLQILETL-----DNKERHPLIA 308 Query: 462 EIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQ 521 I R++ L+++GL Y+TL+R +LSGGE+QR+++ Q+ + L +MY+ DEPS GLH Sbjct: 309 SIKKRIQDLIDIGLGYMTLTRETSSLSGGESQRVKMVKQLASSLTNMMYIFDEPSTGLHP 368 Query: 522 RDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIM 581 RD L L +RD GNTV+VVEHD D I+ ADH++D+GP AG HGGE++ G + ++ Sbjct: 369 RDVHLLNDLLKKIRDEGNTVLVVEHDPDVIKVADHIVDVGPYAGSHGGEIMYTGDYDGLL 428 Query: 582 AVPESLTGQYMSGKRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGV 641 +LTG Y+ + ++P K+ + + +NLK++ L +P G+FT ++GV Sbjct: 429 DS-GTLTGNYL----RHQLPIKKEVRTFSETFISRQSSLHNLKNIRLEIPKGVFTVVSGV 483 Query: 642 SGSGKSTLINDTLFPIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNP 701 +GSGKSTL+N L IDQ+PI RSNP Sbjct: 484 AGSGKSTLVNQVFLKDFPESL------------------------LIDQNPIHTNKRSNP 519 Query: 702 ATYTGVFTPVRELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYV 761 AT++G+ +R+ F + G FS+N +G C C G GVI++ + F+ + V Sbjct: 520 ATFSGIMNNIRKAFG-----KENQVDAGYFSYNSKGA-CPECNGMGVIELNLSFMDESEV 573 Query: 762 PCDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYI 821 C C GKRY+ L+ +Y+GK I EV+DMTIEEA EFFD + RKL+ L +VG+ Y+ Sbjct: 574 VCSNCHGKRYDPAVLDYRYRGKNIVEVMDMTIEEALEFFDE-KEIQRKLENLEEVGIGYL 632 Query: 822 RLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQ 881 LGQ TLSGGEAQR+KLA EL T +YILDEPTTGLH +D++ ++ +++ L D+ Sbjct: 633 TLGQPMDTLSGGEAQRLKLANEL---KTNGQIYILDEPTTGLHMSDVENVIRIINNLVDK 689 Query: 882 GNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARF 935 GNT++VIEHNLDVI++ADWI+DLGPEGGSGGG IL G P + + + T + Sbjct: 690 GNTVIVIEHNLDVIRSADWIIDLGPEGGSGGGNILYEGIPGGL-KNAQTITGNY 742 Score = 174 bits (442), Expect = 1e-41, Method: Composition-based stats. Identities = 76/231 (32%), Positives = 113/231 (48%), Gaps = 28/231 (12%) Query: 2 DKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYA 61 + IE+ AR +NLKNI+L IP++K+ + TG+SGSGKSS+ FDT+ E R+ E+ +++A Sbjct: 3 EYIELIHARENNLKNIDLRIPKNKITIFTGVSGSGKSSIVFDTIAQEAGRQLNETFNSFA 62 Query: 62 RQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEP--- 118 R FL +PD+D I+ LS A+ I QK N RST+GT T+I R+LF+R EP Sbjct: 63 RNFLPKYSRPDIDEIKHLSTAVLINQKKLGGNARSTLGTATDIQALFRILFSRFAEPPLG 122 Query: 119 ------------RCPDHDVPLAAQT--VSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTK 164 CP T + VD S EG L+ + + + Sbjct: 123 YANAYSFNDPQGMCPVCQGIGKTITLNIDAAVDVTRSLNEGAILLPNFTVGTWYWKMYAE 182 Query: 165 T--------LENLASQGYIRARIDGEVCDLSDPPKLELQKKHTIEVVVDRF 207 T + S+ Y R G+ ++ P ++ T E +V RF Sbjct: 183 TGLFDPNKPISEYTSEEYDRLLY-GKAERINIPSAGDMNV--TYEGIVTRF 230 Score = 90.8 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 49/149 (32%), Positives = 69/149 (46%), Gaps = 8/149 (5%) Query: 609 PEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIA 668 + ++L AR NNLK++ L +P T TGVSGSGKS+++ DT+ A RQLN + Sbjct: 1 MTEYIELIHARENNLKNIDLRIPKNKITIFTGVSGSGKSSIVFDTIAQEAGRQLNETFNS 60 Query: 669 EPAPYRDIQGLEHFDKV------IDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESR 722 + D++ + I+Q +G RS T T + R LF+ E Sbjct: 61 FARNFLPKYSRPDIDEIKHLSTAVLINQKKLGGNARSTLGTATDIQALFRILFSRFAEP- 119 Query: 723 ARGYTPGRFSFNVRGGRCEACQGDGVIKV 751 GY +SFN G C CQG G Sbjct: 120 PLGYANA-YSFNDPQGMCPVCQGIGKTIT 147 Score = 76.2 bits (186), Expect = 6e-12, Method: Composition-based stats. Identities = 36/156 (23%), Positives = 56/156 (35%), Gaps = 44/156 (28%) Query: 7 RGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQFLS 66 R + HNLKNI L IP+ VV+G++GSGKS+L + + F Sbjct: 458 RQSSLHNLKNIRLEIPKGVFTVVSGVAGSGKSTLVNQV---------------FLKDF-- 500 Query: 67 LMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEP-------- 118 ++ I+Q N RS T + I + +R F + + Sbjct: 501 -------------PESLLIDQNPIHTNKRSNPATFSGIMNNIRKAFGKENQVDAGYFSYN 547 Query: 119 ---RCPDHDVPLA---AQTVSQMVDNVLSQPEGKRL 148 CP+ + + + V S GKR Sbjct: 548 SKGACPECNGMGVIELNLSFMDESEVVCSNCHGKRY 583 >UniRef50_C2ENC0 Excinuclease subunit A n=1 Tax=Lactobacillus ultunensis DSM 16047 RepID=C2ENC0_9LACO Length = 755 Score = 591 bits (1525), Expect = e-167, Method: Composition-based stats. Identities = 239/716 (33%), Positives = 375/716 (52%), Gaps = 60/716 (8%) Query: 228 SGGTAVVADMDDPKAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQ 287 + V + D L + P G SM +S N+PAG CPTC GLG Q Sbjct: 94 GSSRSTVGTIVDVAPLLRLLYSRVGQPSAGGSMS------YSPNHPAGMCPTCTGLGKIQ 147 Query: 288 YFDPDRVIQNPELSLAGGAIRGWDRRNFYYFQMLKSLADHYKFDVEAPWGSLSANVHKVV 347 D D + + S+ GAI + + + + D S +++ Sbjct: 148 ELDEDSLF-DVNKSINEGAILFEPFSSGWQSYLYSTNPQ---LDPNKKLKDFSEKEWQIL 203 Query: 348 LYGSGKENIEFKYMNDRGDTSIRRHPFEGVLHNMERRYKETE----SSAVREELAKFISN 403 YG +E N G + R +EGV+ +R Y + + S R ++ ++ Sbjct: 204 KYGDNQEVKIEIRSNKTG--RVDRVDYEGVIPRFKRLYLKRDISKLSKKSRTQVLSHVTT 261 Query: 404 RPCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEI 463 PC++C GT L A + + ++ +S+ + + + + A+ + ++I Sbjct: 262 VPCSACAGTGLNPRALASKINGLNIVDMTALSVDELLPYLDKI-----DDPRAKSLSRQI 316 Query: 464 GDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRD 523 + ++ ++++G+ YL+L R TLSGGE QR+++ +G+ L V Y+LDEP+ GLH D Sbjct: 317 ANTIQHMIDIGVGYLSLDRKTNTLSGGEMQRLKIVRNLGSSLNNVTYILDEPTTGLHPAD 376 Query: 524 NERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAV 583 +++ L++LRD N V+VVEH I AD V+++GP AG GG++V +G L + Sbjct: 377 IDKIGKMLLNLRDAHNNVLVVEHSRQIINLADEVVEMGPQAGSAGGQIVYQGDLTGLKKA 436 Query: 584 PESLTGQYMSGKRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSG 643 ++LTG + K ++ ++ + A +NLK V + +P + T +TGV+G Sbjct: 437 -DTLTGHDLVQKIELNKEPRK----WSDSFHIRDAHCHNLKHVDVDIPKNVLTAVTGVAG 491 Query: 644 SGKSTLINDTLFPIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPAT 703 SGKS+LI ++ + I IDQ PIG + RS PAT Sbjct: 492 SGKSSLIR------------------------YDFIKQHPEAIVIDQKPIGTSIRSTPAT 527 Query: 704 YTGVFTPVRELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPC 763 YTGV +R++F +A P FSFN +G C C+G GVIK +M F + V C Sbjct: 528 YTGVMDEIRKIFG-----KANNVAPSWFSFNSKGA-CPICKGRGVIKYDMAFADAVEVIC 581 Query: 764 DQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRL 823 ++C+G RY+++ L KY+GK I EV++ TI +A FFD + LQ L+DVGL Y+ L Sbjct: 582 EECQGHRYSQKALSYKYQGKNIEEVMNFTISDAINFFDNQK-ITNALQKLIDVGLGYLTL 640 Query: 824 GQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGN 883 GQ +TLSGGE QR+K+A EL+K+G +Y++DEP GLH +I+ L +L KL + GN Sbjct: 641 GQPTSTLSGGEIQRIKIAAELNKKGN---IYVMDEPAAGLHSENIKTLNKLLQKLVNNGN 697 Query: 884 TIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLKPM 939 T+++IEH L++I ADWI+D+GPEGGS GG++ +GTP+ + S T +LK Sbjct: 698 TVIIIEHRLELISKADWIIDIGPEGGSKGGKVCFTGTPQELCHDTNSKTGIYLKRA 753 Score = 172 bits (435), Expect = 8e-41, Method: Composition-based stats. Identities = 65/178 (36%), Positives = 96/178 (53%), Gaps = 20/178 (11%) Query: 2 DKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYA 61 DKIE+ A +NLK+I+L IP++KL+V G+SGSGKSSL FDT+ E R + S S Y Sbjct: 4 DKIEIIKANENNLKDISLSIPKNKLVVFAGVSGSGKSSLVFDTIATESSREWQNSYSLYL 63 Query: 62 RQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPR-- 119 R + ++PDV+ I+ L+PAI ++Q+++S + RSTVGTI ++ LRLL++RVG+P Sbjct: 64 RNKMPHYQRPDVESIKNLTPAIVVKQQASSGSSRSTVGTIVDVAPLLRLLYSRVGQPSAG 123 Query: 120 -------------CPDHD--VPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEH 162 CP + + D S EG +L + Sbjct: 124 GSMSYSPNHPAGMCPTCTGLGKIQELDEDSLFDVNKSINEGA---ILFEPFSSGWQSY 178 Score = 102 bits (255), Expect = 5e-20, Method: Composition-based stats. Identities = 44/180 (24%), Positives = 69/180 (38%), Gaps = 44/180 (24%) Query: 2 DKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYA 61 D +R A HNLK++++ IP++ L VTG++GSGKSSL RY Sbjct: 459 DSFHIRDAHCHNLKHVDVDIPKNVLTAVTGVAGSGKSSLI----------RY-------- 500 Query: 62 RQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVG----- 116 D I+ AI I+QK + RST T T + D +R +F + Sbjct: 501 ------------DFIKQHPEAIVIDQKPIGTSIRSTPATYTGVMDEIRKIFGKANNVAPS 548 Query: 117 ------EPRCPDHDVPLAAQTVSQM---VDNVLSQPEGKRLMLLAPIIKERKGEHTKTLE 167 + CP + V+ + + +G R A K + + + Sbjct: 549 WFSFNSKGACPICKGRGVIKYDMAFADAVEVICEECQGHRYSQKALSYKYQGKNIEEVMN 608 Score = 78.1 bits (191), Expect = 2e-12, Method: Composition-based stats. Identities = 41/139 (29%), Positives = 63/139 (45%), Gaps = 8/139 (5%) Query: 618 ARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGA---TIAEPAPYR 674 A NNLKD++L++P GVSGSGKS+L+ DT+ + R+ + + P+ Sbjct: 11 ANENNLKDISLSIPKNKLVVFAGVSGSGKSSLVFDTIATESSREWQNSYSLYLRNKMPHY 70 Query: 675 DIQGLEHFDKV---IDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESRARGYTPGRF 731 +E + I + Q + RS T V +R L++ V + A G + Sbjct: 71 QRPDVESIKNLTPAIVVKQQASSGSSRSTVGTIVDVAPLLRLLYSRVGQPSAGG--SMSY 128 Query: 732 SFNVRGGRCEACQGDGVIK 750 S N G C C G G I+ Sbjct: 129 SPNHPAGMCPTCTGLGKIQ 147 >UniRef50_A0LIN7 Excinuclease ABC subunit A n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LIN7_SYNFM Length = 874 Score = 589 bits (1519), Expect = e-166, Method: Composition-based stats. Identities = 281/537 (52%), Positives = 384/537 (71%), Gaps = 2/537 (0%) Query: 404 RPCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEI 463 C SC G+RL AR ++ + + + +++ +L L+ +A IA++ L+EI Sbjct: 326 TICPSCGGSRLNGSARSFFLGGLGIHEACGLQLQAVLDWLADLNLSSSQALIADRPLREI 385 Query: 464 GDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRD 523 RL L+ +GL YLTL R+A+TLSGGEAQRIRLA Q+ + L GV+YVLDEPSIGLH RD Sbjct: 386 IGRLNHLLELGLAYLTLDRAADTLSGGEAQRIRLAHQLSSSLSGVLYVLDEPSIGLHPRD 445 Query: 524 NERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAV 583 + +LL L LRD GN+VIVVEHD I ADHV+D+GPGAG GGEVV G ++ Sbjct: 446 HRKLLDILFRLRDAGNSVIVVEHDRQTILEADHVVDMGPGAGAGGGEVVFSGTAAQMLEH 505 Query: 584 PESLTGQYMSGKRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSG 643 P+SLTG+Y+SG++ I +P +R P + L GARG+NLK++ + P+G C+TGVSG Sbjct: 506 PDSLTGKYLSGRKVISIPPRRKPFARGTLQ-LRGARGHNLKNIDVDFPLGCLICVTGVSG 564 Query: 644 SGKSTLINDTLFPIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPAT 703 SGKSTL+ TL+ R+L+G+ AP+ + E K++ IDQSP+G+TPRS PAT Sbjct: 565 SGKSTLVLHTLYRALARRLHGSRSP-VAPFDTLGNAEAVGKILLIDQSPLGKTPRSTPAT 623 Query: 704 YTGVFTPVRELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPC 763 Y+G+F +R++F+ VPE+RARGY P RFSFN +GGRCEAC+G+G+ ++EM+FLPD+YV C Sbjct: 624 YSGLFDHIRQVFSQVPEARARGYRPARFSFNAKGGRCEACKGEGLQRIEMYFLPDVYVTC 683 Query: 764 DQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRL 823 C G RY +TL+I +KG +I VLDMT+ EA F+ A+ KL TL++VGL Y+RL Sbjct: 684 PVCGGTRYGNDTLDILFKGHSIASVLDMTVHEAVVLFENFTAIRAKLDTLIEVGLGYLRL 743 Query: 824 GQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGN 883 GQ A TLSGGEAQRVKLA EL +G G+ LYILDEPTTGLHF DI++LL VL +L D G+ Sbjct: 744 GQPANTLSGGEAQRVKLAAELGVKGIGRALYILDEPTTGLHFEDIERLLHVLQRLVDLGH 803 Query: 884 TIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLKPML 940 T+++IEH+ DV+KTAD+++DLGPEGG GG ++ +G+PE ++ E+S T R+L+ +L Sbjct: 804 TVILIEHHPDVVKTADYVIDLGPEGGEQGGYLIGAGSPEELSTVESSFTGRYLREVL 860 Score = 335 bits (859), Expect = 5e-90, Method: Composition-based stats. Identities = 141/304 (46%), Positives = 187/304 (61%), Gaps = 9/304 (2%) Query: 1 MDKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAY 60 MD+I ++GAR HNLKNI+L +PR++ +V+TG+SGSGKSSLAFDTL++EG+RRYVESLS + Sbjct: 4 MDQIVIKGARGHNLKNIDLELPRNRFVVITGVSGSGKSSLAFDTLFSEGRRRYVESLSTH 63 Query: 61 ARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRC 120 ARQ L + P VD I GLSPAI+IEQK NPRSTVGT+TEI+DYLRLL+AR+ C Sbjct: 64 ARQMLQRLSAPPVDEIRGLSPAIAIEQKGLPRNPRSTVGTLTEINDYLRLLYARLSIAHC 123 Query: 121 PDHDVPLAAQTVSQMVDNVLSQ-PEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARI 179 P P+ A TV QMV VL+ P G RL+++AP+ K L+ L G+ R R+ Sbjct: 124 PSCGHPVRAHTVPQMVQEVLAAWPSGSRLLIVAPLEPVPAKHLPKVLQKLTRDGFARIRM 183 Query: 180 DGEVCDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVADMDD 239 D V +L P L + + +EVVVDR + + +RL +SFE A + G ++ Sbjct: 184 DDVVFELDPLPLLPRRAEFRLEVVVDRIVLDESRARRLTDSFEVAAGIGRGMTGAVRLEG 243 Query: 240 PKAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPE 299 E+ FS C CGY + P LFSF++P G CP C GLG D + P Sbjct: 244 G---EMRFSEAHRCVACGYDVPRPTPSLFSFHHPLGTCPECRGLGF-----LDHTVPEPG 295 Query: 300 LSLA 303 + Sbjct: 296 RRVR 299 Score = 172 bits (435), Expect = 7e-41, Method: Composition-based stats. Identities = 75/202 (37%), Positives = 109/202 (53%), Gaps = 15/202 (7%) Query: 403 NRPCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKE 462 C C GTR + + + + ++ DM++ A+ F N Sbjct: 680 YVTCPVCGGTRYGNDTLDILFKGHSIASVLDMTVHEAVVLFEN--------------FTA 725 Query: 463 IGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGV-MYVLDEPSIGLHQ 521 I +L L+ VGL YL L + A TLSGGEAQR++LA+++G +G +Y+LDEP+ GLH Sbjct: 726 IRAKLDTLIEVGLGYLRLGQPANTLSGGEAQRVKLAAELGVKGIGRALYILDEPTTGLHF 785 Query: 522 RDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIM 581 D ERLL L L DLG+TVI++EH D ++ AD+VID+GP G GG ++ G E + Sbjct: 786 EDIERLLHVLQRLVDLGHTVILIEHHPDVVKTADYVIDLGPEGGEQGGYLIGAGSPEELS 845 Query: 582 AVPESLTGQYMSGKRKIEVPKK 603 V S TG+Y+ K + Sbjct: 846 TVESSFTGRYLREVLKRTSVPE 867 Score = 103 bits (256), Expect = 5e-20, Method: Composition-based stats. Identities = 48/121 (39%), Positives = 66/121 (54%), Gaps = 7/121 (5%) Query: 3 KIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYAR 62 +++RGAR HNLKNI++ P LI VTG+SGSGKS+L TLY RR S S A Sbjct: 533 TLQLRGARGHNLKNIDVDFPLGCLICVTGVSGSGKSTLVLHTLYRALARRLHGSRSPVA- 591 Query: 63 QFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCPD 122 F +L V I + I+Q PRST T + + D++R +F++V E R Sbjct: 592 PFDTLGNAEAVGKI------LLIDQSPLGKTPRSTPATYSGLFDHIRQVFSQVPEARARG 645 Query: 123 H 123 + Sbjct: 646 Y 646 Score = 78.9 bits (193), Expect = 8e-13, Method: Composition-based stats. Identities = 40/113 (35%), Positives = 57/113 (50%), Gaps = 6/113 (5%) Query: 615 LTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAEPAPYR 674 + GARG+NLK++ L LP F ITGVSGSGKS+L DTLF +R+ + Sbjct: 9 IKGARGHNLKNIDLELPRNRFVVITGVSGSGKSSLAFDTLFSEGRRRYVESLSTHARQML 68 Query: 675 DIQGLEHFDKV------IDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPES 721 D++ I I+Q + R PRS T T + +R L+A + + Sbjct: 69 QRLSAPPVDEIRGLSPAIAIEQKGLPRNPRSTVGTLTEINDYLRLLYARLSIA 121 >UniRef50_A6VRX7 ABC transporter related n=4 Tax=Bacteria RepID=A6VRX7_MARMS Length = 761 Score = 586 bits (1510), Expect = e-165, Method: Composition-based stats. Identities = 245/717 (34%), Positives = 359/717 (50%), Gaps = 62/717 (8%) Query: 228 SGGTAVVADMDDPKAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQ 287 + V D + L + P GYS +FSFN+P G CPTC GLG+ Sbjct: 99 GNARSTVGTATDIQPLLRLLFSRLGEPFVGYS------NVFSFNHPQGMCPTCQGLGMVD 152 Query: 288 YFDPDRVIQNPELSLAGGAIRGWDRRNFYYFQMLKSLADHYKFDVEAPWGSLSANVHKVV 347 FD D + + SL GAIR + K A FD + P +A+ + + Sbjct: 153 EFDLDVMF-DRSKSLNQGAIRFPTFARGTFRW--KRYAYSGLFDCDKPLADYTADEWQTL 209 Query: 348 LYGSGKENIEFKYMNDRGDTSIRRHPFEGVLHNMERRYKETES----SAVREELAKFISN 403 LY ++ F+GV+ R Y + E A RE LA I+ Sbjct: 210 LYADDLAV------SNPLPGWPSSARFQGVVPRFRRAYLDHEPSRLTKAEREGLAHVITR 263 Query: 404 RPCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEI 463 + C +C G RL ++ + ++ I + F + ++ +L I Sbjct: 264 QRCQACGGARLNPTILSCKIKGKSIADCGNLEISDLLLFIRTI-----DSEAIATVLTAI 318 Query: 464 GDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRD 523 +RL+ + +GL+YL+L R +LSGGE+QR+++ +G+ L + Y+ DEPS+GLH D Sbjct: 319 IERLEQMRAIGLDYLSLGRETASLSGGESQRVKMVRHLGSSLADIAYIFDEPSVGLHPSD 378 Query: 524 NERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAV 583 +L L LRD GNTV+VVEHD D I ADHV+D+GPGAG GG VV +G + Sbjct: 379 VHQLNTLLRSLRDKGNTVLVVEHDPDVIAIADHVVDMGPGAGKDGGHVVYQGDYAGLRQA 438 Query: 584 PESLTGQYMSGKRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSG 643 ++LTG+Y+ P R P + + L +NL+DV +++P G+ T +TGV+G Sbjct: 439 -DTLTGRYLLRA----TPMIREPRSATGQIALQHLSLHNLQDVNVSIPTGVLTVVTGVAG 493 Query: 644 SGKSTLINDTLFPIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPAT 703 SGKSTL+N L L H I IDQ +G T RS+ ++ Sbjct: 494 SGKSTLVNRLL------------------------LRHCPDAILIDQKSLGGTRRSSVSS 529 Query: 704 YTGVFTPVRELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPC 763 YTGV +R F +A G FS N G C AC+G G+I ++ F+ + PC Sbjct: 530 YTGVLDEIRSGFT-----KASGQPASLFS-NNAQGACPACKGLGLIHTDLAFMDSVETPC 583 Query: 764 DQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRL 823 D C +N I + G I +VL ++E+A F A + L L +VGL Y+ L Sbjct: 584 DACSATGFNEAARAITWMGCNIAQVLAFSVEQALRHFQAYQEIVEPLHRLSNVGLGYLSL 643 Query: 824 GQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGN 883 GQ TLSGGE QR+KLA L++ G+ LY+ DEPT+GLH +D+ +LL +L L +G Sbjct: 644 GQRLNTLSGGERQRLKLACRLAEEGS---LYVFDEPTSGLHMSDVDRLLTILDDLTQRGA 700 Query: 884 TIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLKPML 940 T++V+EHNLDV+ ADW++++GP G GG+++ G P + S T FL+ L Sbjct: 701 TVIVVEHNLDVMAHADWLIEMGPGAGKKGGKVIFEGLPTAMISASKSVTGPFLRHHL 757 Score = 176 bits (446), Expect = 4e-42, Method: Composition-based stats. Identities = 76/288 (26%), Positives = 114/288 (39%), Gaps = 35/288 (12%) Query: 3 KIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYAR 62 +E+ GAR +NL+++ + +P+ + V TG+SGSGKSSL FDT+ AE QR+ ES SA+ R Sbjct: 10 DMEIIGARNNNLRSVTVKVPKHCITVFTGVSGSGKSSLVFDTIAAESQRQLNESHSAFIR 69 Query: 63 QFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPR--- 119 L +P D + L +I ++QK N RSTVGT T+I LRLLF+R+GEP Sbjct: 70 HRLPHYGQPQADALCNLPASIVVDQKPLGGNARSTVGTATDIQPLLRLLFSRLGEPFVGY 129 Query: 120 ------------CPDHDVP--LAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHT-- 163 CP + + M D S +G + P Sbjct: 130 SNVFSFNHPQGMCPTCQGLGMVDEFDLDVMFDRSKSLNQGA---IRFPTFARGTFRWKRY 186 Query: 164 ---------KTLENLASQGYIRARIDGEVCDLSDPPKLELQKKHTIEVVVDRFKVRDDLT 214 K L + + + ++ + P + V R D Sbjct: 187 AYSGLFDCDKPLADYTADEWQTLLYADDLAVSNPLPGWPSSARFQGVVPRFRRAYLDHEP 246 Query: 215 QRLAESFETALELSGGTAVVADMDDPKAEELLFSANFACPICGYSMRE 262 RL + A + L +C I G S+ + Sbjct: 247 SRLTK----AEREGLAHVITRQRCQACGGARLNPTILSCKIKGKSIAD 290 Score = 101 bits (253), Expect = 9e-20, Method: Composition-based stats. Identities = 56/150 (37%), Positives = 79/150 (52%), Gaps = 8/150 (5%) Query: 607 ANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGAT 666 +P + +++ GAR NNL+ VT+ +P T TGVSGSGKS+L+ DT+ +QRQLN + Sbjct: 5 HSPYQDMEIIGARNNNLRSVTVKVPKHCITVFTGVSGSGKSSLVFDTIAAESQRQLNESH 64 Query: 667 IAEPAPYRDIQGLEHFDKV------IDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPE 720 A G D + I +DQ P+G RS T T + +R LF+ + E Sbjct: 65 SAFIRHRLPHYGQPQADALCNLPASIVVDQKPLGGNARSTVGTATDIQPLLRLLFSRLGE 124 Query: 721 SRARGYTPGRFSFNVRGGRCEACQGDGVIK 750 GY+ FSFN G C CQG G++ Sbjct: 125 P-FVGYSN-VFSFNHPQGMCPTCQGLGMVD 152 Score = 81.2 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 38/153 (24%), Positives = 60/153 (39%), Gaps = 41/153 (26%) Query: 3 KIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYAR 62 +I ++ HNL+++N+ IP L VVTG++GSGKS+L L Sbjct: 462 QIALQHLSLHNLQDVNVSIPTGVLTVVTGVAGSGKSTLVNRLL----------------- 504 Query: 63 QFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLR-----------LL 111 + AI I+QKS RS+V + T + D +R L Sbjct: 505 -------------LRHCPDAILIDQKSLGGTRRSSVSSYTGVLDEIRSGFTKASGQPASL 551 Query: 112 FARVGEPRCPDHDVPLAAQTVSQMVDNVLSQPE 144 F+ + CP T +D+V + + Sbjct: 552 FSNNAQGACPACKGLGLIHTDLAFMDSVETPCD 584 >UniRef50_C5C6C3 ABC transporter related n=3 Tax=Actinomycetales RepID=C5C6C3_BEUC1 Length = 798 Score = 581 bits (1497), Expect = e-164, Method: Composition-based stats. Identities = 270/859 (31%), Positives = 401/859 (46%), Gaps = 99/859 (11%) Query: 101 ITEIHDYLRLLFARVGEPRCPDHDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKG 160 + HD++R+ AR R D ++P TV V GK ++ A I E + Sbjct: 16 AADAHDFIRVRGARENNLRDVDVEIPKRRLTVFTGVS-----GSGKSSLVFATIAAESRR 70 Query: 161 EHTKTLENLASQGYIRA--RIDGEVCD------LSDPPKLELQKKHTIEVVVDRFKVRDD 212 +T QG++ + R D +V + L D ++ + T+ V D + + Sbjct: 71 LIDETYSTFV-QGFMPSLPRPDVDVLEGITTAILVDQERMGANVRSTVGTVTDANAMLRN 129 Query: 213 LTQRLAESF---ETALELSGGTAVVADMDDPKAEELLFSANFACPICGYSMRELEPRLFS 269 L R+ + + TA + T S G + E+E ++ Sbjct: 130 LFSRIGDPYVGPPTAFSFNIPT----------------STASGVFSTGKAGGEVEKKVVR 173 Query: 270 FNNPAG-ACPTCDGLGVQQYFDPDRVIQNPELSLAGGAIRGWDRRNFYYFQMLKSLADHY 328 G CP C+G G D ++ + SL GAI + M+K ++ Sbjct: 174 NQVYLGGMCPECEGRGTVSDLDLSVIV-DESKSLHEGAILVPGYKAD--GWMVKGFSETG 230 Query: 329 KFDVEAPWGSLSANVHKVVLYGSGKENIEFKYMNDRGDTSIRRHPFEGVLHNMERRY--- 385 D + P + LY + ++G++ ++ Sbjct: 231 LLDGDKPIRDYTDTERHDFLY----------REKGKLKALGMNMTYQGLIPKLQESMFSR 280 Query: 386 -KETESSAVREELAKFISNRPCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFN 444 E+ +R + + C +CEGTRL AR V + + M I A E+ Sbjct: 281 APESLQPHIRAFVERAAVFVACPACEGTRLNDSARSAKVNGASIADVCRMQISDAAEWAR 340 Query: 445 NLKLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAG 504 + ++ + V +GL YL+L R+A TLSGGEAQR ++ +G+ Sbjct: 341 GV-----DDPGVAPLIGSLLHLFDKFVEIGLGYLSLDRAAGTLSGGEAQRTKMIRHLGSA 395 Query: 505 LVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGA 564 L V YV DEP+IGLH D ER+ L+ LRD GNTV+VVEH + I DHVID+GPGA Sbjct: 396 LTDVTYVFDEPTIGLHPHDIERMNRLLLDLRDKGNTVLVVEHKPETIAVGDHVIDLGPGA 455 Query: 565 GVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEVPKKRVPANPEKVLKLTGARGNNLK 624 G GG V EG +E + ++LTG+++ + + K P L++ GA NNL Sbjct: 456 GTDGGTVCFEGTVEG-LRSSDTLTGRHLDDRTHV----KDSVRTPSGALEIRGASQNNLT 510 Query: 625 DVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAEPAPYRDIQGLEHFDK 684 V + +P G+ T +TGV+GSGKS+LI+ L D Sbjct: 511 GVDVDVPTGVLTVVTGVAGSGKSSLIHGNLAGR-------------------------DG 545 Query: 685 VIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESRARGYTPGRFSFNVRGGRCEACQ 744 V+ +DQ I + RSNPATYTG+ P+R+ FA + + P FS N G C C+ Sbjct: 546 VVVVDQGAIKGSRRSNPATYTGLLEPIRKAFAKANDVK-----PALFSSNSEGA-CPTCK 599 Query: 745 GDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDA-- 802 G+G I E+ F+ + PC+ C GKR+ LE G I EVLD+++ +A FF Sbjct: 600 GNGRIYTELGFMETVETPCEDCGGKRFMASVLEYTLGGLNIAEVLDLSVAQAHAFFREGE 659 Query: 803 --VPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPT 860 +PA + L L DVGL YI+LGQ TLSGGE QR+KLA E+ + G+ +Y+LDEPT Sbjct: 660 AKIPAAHKILARLEDVGLGYIKLGQPLNTLSGGERQRLKLAMEMGESGS---VYVLDEPT 716 Query: 861 TGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGT 920 TGLH AD++ LL +L +L D G ++VVIEH+ V+ ADWI+DLGP G GG ++ G Sbjct: 717 TGLHLADVENLLALLDRLVDGGKSVVVIEHHQAVMAHADWIIDLGPGAGHDGGRVVFEGA 776 Query: 921 PETVAECEASHTARFLKPM 939 P + ++ T L Sbjct: 777 PADLVAARSTLTGEHLADY 795 Score = 164 bits (416), Expect = 1e-38, Method: Composition-based stats. Identities = 55/118 (46%), Positives = 84/118 (71%) Query: 2 DKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYA 61 D I VRGAR +NL+++++ IP+ +L V TG+SGSGKSSL F T+ AE +R E+ S + Sbjct: 21 DFIRVRGARENNLRDVDVEIPKRRLTVFTGVSGSGKSSLVFATIAAESRRLIDETYSTFV 80 Query: 62 RQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPR 119 + F+ + +PDVD +EG++ AI ++Q+ N RSTVGT+T+ + LR LF+R+G+P Sbjct: 81 QGFMPSLPRPDVDVLEGITTAILVDQERMGANVRSTVGTVTDANAMLRNLFSRIGDPY 138 Score = 87.4 bits (215), Expect = 2e-15, Method: Composition-based stats. Identities = 49/186 (26%), Positives = 78/186 (41%), Gaps = 13/186 (6%) Query: 600 VPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQ 659 A+ +++ GAR NNL+DV + +P T TGVSGSGKS+L+ T+ ++ Sbjct: 10 ATPSSHAADAHDFIRVRGARENNLRDVDVEIPKRRLTVFTGVSGSGKSSLVFATIAAESR 69 Query: 660 RQLNGATIA------EPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRE 713 R ++ P D+ LE I +DQ +G RS T T +R Sbjct: 70 RLIDETYSTFVQGFMPSLPRPDVDVLEGITTAILVDQERMGANVRSTVGTVTDANAMLRN 129 Query: 714 LFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEM---HFLPDIYV--PCDQCKG 768 LF+ + + P FSFN+ G E+ +Y+ C +C+G Sbjct: 130 LFSRIGDPYVGP--PTAFSFNIPTSTASGVFSTGKAGGEVEKKVVRNQVYLGGMCPECEG 187 Query: 769 KRYNRE 774 + + Sbjct: 188 RGTVSD 193 Score = 77.7 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 52/260 (20%), Positives = 90/260 (34%), Gaps = 54/260 (20%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 63 +E+RGA +NL +++ +P L VVTG++GSGKSSL L Sbjct: 499 LEIRGASQNNLTGVDVDVPTGVLTVVTGVAGSGKSSLIHGNLA----------------- 541 Query: 64 FLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPR---- 119 + V + ++Q + + RS T T + + +R FA+ + + Sbjct: 542 -----GRDGV---------VVVDQGAIKGSRRSNPATYTGLLEPIRKAFAKANDVKPALF 587 Query: 120 -------CPDHDVPLAAQTVSQMVDNV---LSQPEGKRLMLLAPIIKERKGEHTKTLENL 169 CP T ++ V GKR M + L+ Sbjct: 588 SSNSEGACPTCKGNGRIYTELGFMETVETPCEDCGGKRFMASVLEYTLGGLNIAEVLDLS 647 Query: 170 ASQGYIRARIDGEVCDLSDPPKLELQKKHTIEVV---VDRFKVRDDLTQRLAESFETALE 226 +Q + R +GE + L + + + + QRL A+E Sbjct: 648 VAQAHAFFR-EGEAKIPAAHKILARLEDVGLGYIKLGQPLNTLSGGERQRLK----LAME 702 Query: 227 LSGGTAVVADMDDPKAEELL 246 + + V +D+P L Sbjct: 703 MGESGS-VYVLDEPTTGLHL 721 >UniRef50_C0VYB5 Excinuclease subunit A n=1 Tax=Actinomyces coleocanis DSM 15436 RepID=C0VYB5_9ACTO Length = 833 Score = 575 bits (1483), Expect = e-162, Method: Composition-based stats. Identities = 251/779 (32%), Positives = 381/779 (48%), Gaps = 111/779 (14%) Query: 228 SGGTAVVADMDDPKAEELLFSANFACPICG----YSMRELEPRLFSFNNPA--------- 274 + + V + D L A F +++ P FSFN P Sbjct: 99 ANARSTVGTVTDVSTLLRLIWAKFGVVAENNTKVRALKMSSPNAFSFNVPNVKASGAIKV 158 Query: 275 -----------------GACPTCDGLGVQQYFDPDRVIQNPELSLAGGAIRGWDRRNFYY 317 G C C+GLGV D + + N ELSL GAI Sbjct: 159 EKGKDTKTEKRTYEVNGGMCADCEGLGVVNDIDLTK-VFNVELSLNDGAIT--VPGYTAD 215 Query: 318 FQMLKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKENIEFKYMNDRGDTSIRRHPFEGV 377 ++ + F + P + +A + LYG + +EG+ Sbjct: 216 GWAVRLYSASGFFPADQPIKTFTAEQLQTFLYGEPVKV----------KIESINMTYEGL 265 Query: 378 LHNMERRYKETE----SSAVREELAKFISNRPCASCEGTRLRREARHVYVENTPLPAISD 433 + +++ + +R+ + ++ PC +CEGTRL AR V V + Sbjct: 266 IPKLQKSMFSKDIEGLQPHIRKFVETAVTFAPCPACEGTRLNPAARAVTVAGLNIAQAHV 325 Query: 434 MSIGHAMEFFNNLKLAGQRAKIAEKILKE--------IGDRLKFLVNVGLNYLTLSRSAE 485 + I + + L AE L + ++L V +GL YL+L+RSA Sbjct: 326 LEITDLLAWVQQLLAGEIALAAAEAPLISEGGLLLTNLAEQLSSFVEIGLGYLSLARSAS 385 Query: 486 TLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVE 545 +LSGGEAQR+++ + + L + YV DEP+ GLH D ER+ L+ LRD GNTV+V+E Sbjct: 386 SLSGGEAQRVKMIRHLRSALTDMTYVFDEPTAGLHPHDIERMKRVLLQLRDAGNTVLVIE 445 Query: 546 HDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLT----------------- 588 H + I ADH+ID+GPGAG HGGE++ G ++AV ++ T Sbjct: 446 HRPEVIEIADHIIDMGPGAGKHGGEIMFAGTFSELLAVSDAKTSLGTSLPNGNPRKADSA 505 Query: 589 -GQYMSGKRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKS 647 S + + K + ++L G NNL+ + + +P+G+ T +TGV+GSGKS Sbjct: 506 QTSVTSQVLSLPLQVKTSARTFSEKIELRGVTANNLRGIDVDVPLGVLTAVTGVAGSGKS 565 Query: 648 TLINDTLFPIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGV 707 TLI + A ++I +DQ I + RSNPATYTGV Sbjct: 566 TLIGALVSSGAAP----------------------SEIIMVDQGAIKGSRRSNPATYTGV 603 Query: 708 FTPVRELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCK 767 F P+R+ FA +A G P FS N G CE C+G GVI ++ F+ + C+ C Sbjct: 604 FDPIRKAFA-----KASGQKPALFSANSEGA-CETCKGAGVIYTDLGFMQTVENHCESCD 657 Query: 768 GKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAV---PALARKLQTLMDVGLTYIRLG 824 G+R++ L+ +GK+I +VL+M +EA EFF PA+++ LQ L+DVGL Y+ LG Sbjct: 658 GRRFDESVLQYHLEGKSIADVLEMPAQEALEFFTKEAKNPAVSKVLQRLVDVGLEYLSLG 717 Query: 825 QSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNT 884 QS TTLSGGE QR+KLA +++ +G +Y+LDEP+TGLH AD ++LL +L +L D G T Sbjct: 718 QSLTTLSGGERQRLKLASQMADKGG---IYVLDEPSTGLHLADTRKLLALLDQLVDSGKT 774 Query: 885 IVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECE----ASHTARFLKPM 939 ++V+EHNL V+ ADW++DLGP G GG+++ +GT + + S TA++++ Sbjct: 775 VIVVEHNLHVVAHADWVIDLGPGAGHEGGQVVYAGTVSQMHADKNLADQSKTAQYIQKY 833 Score = 163 bits (412), Expect = 3e-38, Method: Composition-based stats. Identities = 55/116 (47%), Positives = 78/116 (67%) Query: 2 DKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYA 61 D I V GA+ +NLKN+ + IP+ KL V TG+SGSGKSSL FDT+ E QR E+ A+ Sbjct: 9 DFIHVIGAQENNLKNLEVQIPKRKLTVFTGVSGSGKSSLVFDTIATESQRLINETYPAFI 68 Query: 62 RQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGE 117 + F+ + +P VD + GL+PAI + Q+ N RSTVGT+T++ LRL++A+ G Sbjct: 69 QGFMGNLNRPHVDDLRGLTPAIVVSQEKLGANARSTVGTVTDVSTLLRLIWAKFGV 124 Score = 77.0 bits (188), Expect = 4e-12, Method: Composition-based stats. Identities = 41/185 (22%), Positives = 63/185 (34%), Gaps = 42/185 (22%) Query: 2 DKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYA 61 +KIE+RG +NL+ I++ +P L VTG++GSGKS+L Sbjct: 529 EKIELRGVTANNLRGIDVDVPLGVLTAVTGVAGSGKSTL--------------------I 568 Query: 62 RQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLR-----------L 110 +S P S I ++Q + + RS T T + D +R Sbjct: 569 GALVSSGAAP--------SEIIMVDQGAIKGSRRSNPATYTGVFDPIRKAFAKASGQKPA 620 Query: 111 LFARVGEPRCPDHDVPLAAQTVSQMVDNV---LSQPEGKRLMLLAPIIKERKGEHTKTLE 167 LF+ E C T + V +G+R LE Sbjct: 621 LFSANSEGACETCKGAGVIYTDLGFMQTVENHCESCDGRRFDESVLQYHLEGKSIADVLE 680 Query: 168 NLASQ 172 A + Sbjct: 681 MPAQE 685 Score = 73.9 bits (180), Expect = 3e-11, Method: Composition-based stats. Identities = 50/184 (27%), Positives = 74/184 (40%), Gaps = 19/184 (10%) Query: 610 EKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAE 669 + + GA+ NNLK++ + +P T TGVSGSGKS+L+ DT+ +QR +N A Sbjct: 8 HDFIHVIGAQENNLKNLEVQIPKRKLTVFTGVSGSGKSSLVFDTIATESQRLINETYPAF 67 Query: 670 PAPYRDIQGLEHFDKV------IDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESRA 723 + H D + I + Q +G RS T T V T +R ++A Sbjct: 68 IQGFMGNLNRPHVDDLRGLTPAIVVSQEKLGANARSTVGTVTDVSTLLRLIWAKFGVVAE 127 Query: 724 RGY--------TPGRFSFNVRG----GRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRY 771 +P FSFNV G + +G K E C C+G Sbjct: 128 NNTKVRALKMSSPNAFSFNVPNVKASGAIKVEKGKD-TKTEKRTYEVNGGMCADCEGLGV 186 Query: 772 NRET 775 + Sbjct: 187 VNDI 190 >UniRef50_B7GTR5 ABC transporter related n=26 Tax=Bacteria RepID=B7GTR5_BIFLI Length = 862 Score = 573 bits (1476), Expect = e-161, Method: Composition-based stats. Identities = 243/848 (28%), Positives = 394/848 (46%), Gaps = 62/848 (7%) Query: 134 QMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYI---RARIDGEVCDLSDPP 190 ++V GK + L + E + + L + RA++D + P Sbjct: 31 ELVGVAGVSGSGKSSLALGVLYAEGSRRYLEALSTYTRRRLTQASRAQVDEVLHV---PA 87 Query: 191 KLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVADMDDPKAEELLFSAN 250 L L ++ T+ + F +L L L S + V + E L A Sbjct: 88 ALALHQRPTVPGIRSTFGTMTELLNSLR------LLFSRVASHVCSHCGARNEPTLNVAA 141 Query: 251 ---FACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPELSLAGGAI 307 C CG +FN+ AGACPTC G G+ + + ++ + + GA+ Sbjct: 142 GLPITCVSCGKEFHAPGAESLAFNS-AGACPTCSGNGIVREVNRAALVPDESKRIDDGAV 200 Query: 308 RGWDRRNFYYFQMLKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKENIEFKYMNDRGDT 367 W + ++K + P+ L+ +V G + D Sbjct: 201 LPW---GSLMWDLMKQVCGAMGVRTNVPFSELTPEERDIVFNGPAVKKHILYKPKKGDDF 257 Query: 368 SIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGTRLRREARHVYVENTP 427 + + ++ +E + + + +A+F+ PCA C GTRL AR +V Sbjct: 258 AELDFTYFNAVYTVENALAKAKDEKGLKRVARFLKEGPCADCSGTRLSAVARAPHVRGLN 317 Query: 428 LPAISDMSIGHAMEFFNNLK--LAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTLSRSAE 485 L M++ A ++ + L +A I + D + L+++GL YL L R+ Sbjct: 318 LAEAGAMTLDAAADWVRGVPESLRPDMRPMATNICESFLDVARRLLDLGLGYLALDRAGA 377 Query: 486 TLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVE 545 TLS GE QR++LA + GV+YVLDEPSIGLH + + LLG + L GN+V+VV+ Sbjct: 378 TLSTGERQRVQLARAVRNRTTGVLYVLDEPSIGLHPSNVDGLLGVMYDLVADGNSVVVVD 437 Query: 546 HDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEVPKKRV 605 HD ++A DH+I++G AG GG V+ +G + + A P S ++S + + ++ Sbjct: 438 HDVRVLKACDHLIEMGLVAGAEGGHVIVQGTVGEVAANPSSRIAPFLSDQVSARIRERVA 497 Query: 606 PANPEKVLKLT--GARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLN 663 + + + ++ + +K + + +P G +TGVSGSGK+T++ ++L P + Q Sbjct: 498 ESQVFSLGHIRMTTSQLHTVKPLDVDIPRGRLVAVTGVSGSGKTTVVLESLIPALKAQAA 557 Query: 664 GATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESRA 723 G + E + E ++ ID +PIG RS ATY + +R FA +++A Sbjct: 558 GERLPE---HVLELKAEGINRANLIDATPIGANVRSTVATYADIHDELRRAFARADDAKA 614 Query: 724 RGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKYK-- 781 G+ G FS+N RC C G G I +++ FLPD+ + C C G RY E I+ Sbjct: 615 GGWKAGDFSYNTGRLRCPTCDGTGSISLDVQFLPDVTIECPDCGGSRYASEADAIRRAVK 674 Query: 782 ---------------------------------GKTIHEVLDMTIEEAREFFDAVPALAR 808 ++ +++ M++++A + + Sbjct: 675 AAKGKAAKMKVPDKRKAAKEKLSEATGQGGGNISLSLPQLMAMSVDQALAVTSDLKKVHA 734 Query: 809 KLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADI 868 +L TL D+GL Y+ LG+ LSGGEAQR+KLA E+ K + +++ DEPT GLH D+ Sbjct: 735 RLTTLHDLGLGYLTLGEPTPALSGGEAQRLKLASEMGKAQSD-AVFVFDEPTIGLHPFDV 793 Query: 869 QQLLDVLHKLRDQGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECE 928 + LL V +L G T+VVIEH+LDVI ADWI+D+GP GG GG I+ +GTPE +A Sbjct: 794 RVLLGVFDRLVASGATVVVIEHDLDVIANADWIIDMGPGGGESGGRIVATGTPEQIAANP 853 Query: 929 ASHTARFL 936 S T R+L Sbjct: 854 NSITGRYL 861 Score = 170 bits (430), Expect = 3e-40, Method: Composition-based stats. Identities = 61/123 (49%), Positives = 81/123 (65%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 63 IEVRGAR HNLKNI++ IP +L+ V G+SGSGKSSLA LYAEG RRY+E+LS Y R+ Sbjct: 10 IEVRGARVHNLKNIDIDIPLCELVGVAGVSGSGKSSLALGVLYAEGSRRYLEALSTYTRR 69 Query: 64 FLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCPDH 123 L+ + VD + + A+++ Q+ T RST GT+TE+ + LRLLF+RV C Sbjct: 70 RLTQASRAQVDEVLHVPAALALHQRPTVPGIRSTFGTMTELLNSLRLLFSRVASHVCSHC 129 Query: 124 DVP 126 Sbjct: 130 GAR 132 Score = 84.3 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 44/163 (26%), Positives = 71/163 (43%), Gaps = 28/163 (17%) Query: 1 MDKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLY-AEGQRRYVESLSA 59 + I + ++ H +K +++ IPR +L+ VTG+SGSGK+++ ++L A + E L Sbjct: 504 LGHIRMTTSQLHTVKPLDVDIPRGRLVAVTGVSGSGKTTVVLESLIPALKAQAAGERLPE 563 Query: 60 YARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARV---- 115 + + EG++ A I+ N RSTV T +IHD LR FAR Sbjct: 564 HVLEL----------KAEGINRANLIDATPIGANVRSTVATYADIHDELRRAFARADDAK 613 Query: 116 -------------GEPRCPDHDVPLAAQTVSQMVDNVLSQPEG 145 G RCP D + Q + +V + Sbjct: 614 AGGWKAGDFSYNTGRLRCPTCDGTGSISLDVQFLPDVTIECPD 656 Score = 81.2 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 41/178 (23%), Positives = 66/178 (37%), Gaps = 10/178 (5%) Query: 608 NPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATI 667 + +++ GAR +NLK++ + +P+ + GVSGSGKS+L L+ R+ A Sbjct: 5 QRPQAIEVRGARVHNLKNIDIDIPLCELVGVAGVSGSGKSSLALGVLYAEGSRRYLEALS 64 Query: 668 AEPAPYRDIQGLEHFDKVIDI------DQSPIGRTPRSNPATYTGVFTPVRELFAGVP-E 720 D+V+ + Q P RS T T + +R LF+ V Sbjct: 65 TYTRRRLTQASRAQVDEVLHVPAALALHQRPTVPGIRSTFGTMTELLNSLRLLFSRVASH 124 Query: 721 SRARGYTPGRFSFNVRGG---RCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRET 775 + + NV G C +C + + C C G RE Sbjct: 125 VCSHCGARNEPTLNVAAGLPITCVSCGKEFHAPGAESLAFNSAGACPTCSGNGIVREV 182 >UniRef50_D2Q2S9 ABC transporter related protein n=6 Tax=Bacteria RepID=D2Q2S9_9ACTO Length = 753 Score = 570 bits (1470), Expect = e-161, Method: Composition-based stats. Identities = 246/714 (34%), Positives = 351/714 (49%), Gaps = 70/714 (9%) Query: 228 SGGTAVVADMDDPKAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQ 287 + V + D L + + P G E FSFN+PAG CP C GLG Sbjct: 93 GNARSTVGTITDTWTYLRLLFSRTSTPYVG------ESGHFSFNDPAGMCPACAGLGEVV 146 Query: 288 YFDPDRVIQNPELSLAGGAIR--GWDRRNFYYFQMLKSLADHYKFDVEAPWGSLSANVHK 345 DR + + SLA GAI G+ ++Y Q AD FD++ P S Sbjct: 147 VSAVDRFL-DLNKSLAAGAILLPGFGHGGYWYNQ----YADIGSFDLDTPLREWSPTERD 201 Query: 346 VVLYGSGKENIEFKYMNDRGDTSIRRHPFEGVLHNMERRYKETE---SSAVREELAKFIS 402 +LYG +EGV+ ER Y T S ++ + +F Sbjct: 202 ALLYGGEAAAKLGTKPPRD---------YEGVVERFERIYLHTSGDLSERKQDVIRRFTR 252 Query: 403 NRPCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKE 462 + C C G RL AR V + ++ + I + +++ Sbjct: 253 STTCPDCHGDRLTEAARTATVLGRTIGELARLEITDLAALVTKV-----DDPAVAPVVRA 307 Query: 463 IGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQR 522 + RL+ ++ +GL YL L R+ +LSGGE+QRI+ +G+ L ++YV DEP++GLH Sbjct: 308 LTARLEAMITIGLGYLHLGRATTSLSGGESQRIKTVKHLGSSLTEMLYVFDEPTVGLHPH 367 Query: 523 DNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMA 582 D + L LRD GN+V+VVEHD D + AD +I++GPGAG GG +V +G ++ Sbjct: 368 DTPAMTALLEQLRDKGNSVLVVEHDPDVMAVADQIIEVGPGAGDDGGRLVFQGGFGELLE 427 Query: 583 VPESLTGQYMSGKRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVS 642 + TG+ + +R I + + + + A NNL+ VT+ LP G+ T +TGV+ Sbjct: 428 A-GTPTGRALRRRRPITPVPRTGHGS----ITIADATRNNLRHVTVDLPAGVLTVLTGVA 482 Query: 643 GSGKSTLINDTLFPIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPA 702 GSGKS+L + + A + IDQ + RS P Sbjct: 483 GSGKSSLAAELVEQHAA--------------------------VVIDQKAVTTNRRSTPI 516 Query: 703 TYTGVFTPVRELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVP 762 T+TG+ VR FA G + FS N G C C+G GVI ++ F+ Sbjct: 517 TWTGIAPAVRRTFAQR-----NGVSAALFSANSEGA-CPTCKGLGVIHTDLAFMDGQETV 570 Query: 763 CDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIR 822 C+ C G+RY E L + G +I ++ D+T++EA F A+ + L + DVGL Y+R Sbjct: 571 CESCDGRRYTAEVLAYQVAGLSIADIDDLTVDEAVRRFPD-RAVVKALGAIADVGLGYLR 629 Query: 823 LGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQG 882 LGQ TTLSGGE QR+K+AREL TLY+LDEPTTGLH DI LL +L +L D+G Sbjct: 630 LGQPLTTLSGGECQRLKIAREL-HDADKPTLYVLDEPTTGLHLNDIDTLLGILDQLVDRG 688 Query: 883 NTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFL 936 +T+VVIEHNLDVI+ ADW+VDLGP G GG +L GT + A+ TA L Sbjct: 689 HTVVVIEHNLDVIRQADWVVDLGPGPGQHGGRVLYEGTVRDLMTQ-ATPTASAL 741 Score = 175 bits (443), Expect = 9e-42, Method: Composition-based stats. Identities = 80/281 (28%), Positives = 113/281 (40%), Gaps = 48/281 (17%) Query: 2 DKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYA 61 I +R ART+NL ++ IPR++L+V G+SGSGKSSL FDT+ AE + E+ +A Sbjct: 3 KHIRIREARTNNLAGLSADIPRNQLVVFAGISGSGKSSLVFDTVAAEAGHQLNETFPPFA 62 Query: 62 RQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPR-- 119 R L +PDV+ I+GLSP + I+Q+ N RSTVGTIT+ YLRLLF+R P Sbjct: 63 RNRLPRWSRPDVEEIDGLSPVVVIDQRRLGGNARSTVGTITDTWTYLRLLFSRTSTPYVG 122 Query: 120 -------------CPDHD--VPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHT- 163 CP + V + +D S G +L P + Sbjct: 123 ESGHFSFNDPAGMCPACAGLGEVVVSAVDRFLDLNKSLAAGA---ILLPGFGHGGYWYNQ 179 Query: 164 -------KTLENLASQGYIRARIDGEVCDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQR 216 L D + KL + E VV+RF Sbjct: 180 YADIGSFDLDTPLREW--SPTERDALLYGGEAAAKLGTKPPRDYEGVVERF--------- 228 Query: 217 LAESFETALELSGGTAVVADMDDPKAEELLFSANFACPICG 257 E + G + + F+ + CP C Sbjct: 229 -----ERIYLHTSGDLS----ERKQDVIRRFTRSTTCPDCH 260 Score = 97.0 bits (240), Expect = 3e-18, Method: Composition-based stats. Identities = 48/157 (30%), Positives = 66/157 (42%), Gaps = 10/157 (6%) Query: 609 PEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIA 668 K +++ AR NNL ++ +P G+SGSGKS+L+ DT+ A QLN Sbjct: 1 MGKHIRIREARTNNLAGLSADIPRNQLVVFAGISGSGKSSLVFDTVAAEAGHQLNETFPP 60 Query: 669 EPAPYRDIQGLEHFDK------VIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESR 722 ++ V+ IDQ +G RS T T +T +R LF+ Sbjct: 61 FARNRLPRWSRPDVEEIDGLSPVVVIDQRRLGGNARSTVGTITDTWTYLRLLFSRTSTPY 120 Query: 723 ARGYTPGRFSFNVRGGRCEACQGDGVIKVE--MHFLP 757 G FSFN G C AC G G + V FL Sbjct: 121 VGE--SGHFSFNDPAGMCPACAGLGEVVVSAVDRFLD 155 Score = 76.6 bits (187), Expect = 5e-12, Method: Composition-based stats. Identities = 39/160 (24%), Positives = 60/160 (37%), Gaps = 46/160 (28%) Query: 3 KIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYAR 62 I + A +NL+++ + +P L V+TG++GSGKSSLA + + Sbjct: 452 SITIADATRNNLRHVTVDLPAGVLTVLTGVAGSGKSSLAAELVEQHA------------- 498 Query: 63 QFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLR-----------LL 111 A+ I+QK+ + N RST T T I +R L Sbjct: 499 -------------------AVVIDQKAVTTNRRSTPITWTGIAPAVRRTFAQRNGVSAAL 539 Query: 112 FARVGEPRCPDHDVPLAAQTVSQMVD---NVLSQPEGKRL 148 F+ E CP T +D V +G+R Sbjct: 540 FSANSEGACPTCKGLGVIHTDLAFMDGQETVCESCDGRRY 579 >UniRef50_A1SIJ3 ABC transporter related n=10 Tax=Bacteria RepID=A1SIJ3_NOCSJ Length = 836 Score = 568 bits (1463), Expect = e-160, Method: Composition-based stats. Identities = 251/816 (30%), Positives = 407/816 (49%), Gaps = 27/816 (3%) Query: 133 SQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGY---IRARIDGEVCDLSDP 189 +V GK + + + E + + L + RA++D EV + P Sbjct: 32 DGLVAIAGVSGSGKSSLAMGVLYAEGSRRYVEALSTYTRRRMAHATRAQVD-EVRHV--P 88 Query: 190 PKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVADMDDPKAEELLFSA 249 L L+++ + V F + L G ++ Sbjct: 89 AALALRQRPAVPGVRSTFGTSTE----LLNVLRVMFSRLGAHLCPNGHRLAPTIDVAADK 144 Query: 250 NFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPELSLAGGAIRG 309 + CP CG F+FN+ GACP C G G + D ++ + S+A GA+ Sbjct: 145 DLVCPECGAQFSPPGAESFAFNS-GGACPVCQGTGTVRDVDDAALVPDESRSIADGAVAP 203 Query: 310 WDRRNFYYFQMLKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKENIEFKYMNDRGDTSI 369 W + ++ + P+ L+ ++VL G + + + G Sbjct: 204 W---GMFGLTVMPQVVAELGVRTGVPYADLTDAEREIVLDG-PQVKKHIRVPSRNGKLFD 259 Query: 370 RRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGTRLRREARHVYVENTPLP 429 + + S +A+FI+ C +C GTRL EAR V L Sbjct: 260 LDFTYRNARLAVREAMNNATSEKGLARVARFITAHTCHACGGTRLSEEARGTQVAGIDLA 319 Query: 430 AISDMSIGHAMEFFNNLK--LAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTLSRSAETL 487 + +++ A+ + ++ L +A ++ + + L +GL YL+L R+ TL Sbjct: 320 EATALTLDEAVAWVPSVTDTLPADMHPMARMLIIQFEAMARRLTELGLGYLSLDRTGSTL 379 Query: 488 SGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHD 547 S GE QR++LA + GV+YVLDEPSIGLH + E L+ + L D GN+V+VV+HD Sbjct: 380 STGERQRVQLARAVRNDTTGVLYVLDEPSIGLHPANVEGLVAVMRDLLDNGNSVVVVDHD 439 Query: 548 EDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEVPKKRV-- 605 +R AD +I++GPG+G GG V+ +G + + A P SL G +++G + + Sbjct: 440 VQVLREADWMIELGPGSGADGGTVLTQGTIAQVAADPSSLIGPFLTGGVDVVRRLRTPLE 499 Query: 606 PANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGA 665 + V++L +R + ++ + +T+P G T +TG+SGSGK+TL+ D+L P + + Sbjct: 500 TSEDRGVIRLVTSRLHTVQALDVTIPQGRLTAVTGMSGSGKTTLVLDSLVPALRATADNT 559 Query: 666 TIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESRARG 725 + + D G +V +D SPIG RS ATY+G+ +R +A ++ RG Sbjct: 560 PLPDHVVSVDTAG---VSRVDVVDASPIGVNVRSTVATYSGILDELRRAYAASDAAKDRG 616 Query: 726 YTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKY----K 781 T FS+N RC C+G G + +++ FLPD+ +PC C G RY+ + +I Sbjct: 617 LTAADFSYNTGSLRCPRCEGTGQVVLDVQFLPDVDIPCPDCGGARYSPSSNDILLDTEDG 676 Query: 782 GKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLA 841 +++ +L +T+ +A E D +P + RKLQTL+D+GL Y+ LG+ LSGGEAQR+KLA Sbjct: 677 TQSLPGLLALTVRQAHEVLDGLPKVRRKLQTLIDLGLGYLTLGEGTPALSGGEAQRLKLA 736 Query: 842 RELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADWI 901 EL + +G TL++LDEP+ GLH D Q L+ VL +L +G TIV++EH+L++I AD + Sbjct: 737 SELGRDQSG-TLFVLDEPSVGLHPLDTQVLIGVLDRLLAKGATIVLVEHDLELIANADHV 795 Query: 902 VDLGPEGGSGGGEILVSGTPETVAECEASHTARFLK 937 +D+GP GG+ GG I+ SGTPE +A S T R+L+ Sbjct: 796 IDMGPGGGTAGGRIIASGTPEHIAASTDSITGRYLR 831 Score = 160 bits (404), Expect = 3e-37, Method: Composition-based stats. Identities = 58/142 (40%), Positives = 88/142 (61%) Query: 2 DKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYA 61 + I+VRGAR HNLK++++ +P D L+ + G+SGSGKSSLA LYAEG RRYVE+LS Y Sbjct: 10 NGIQVRGARVHNLKDVSVDVPLDGLVAIAGVSGSGKSSLAMGVLYAEGSRRYVEALSTYT 69 Query: 62 RQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCP 121 R+ ++ + VD + + A+++ Q+ RST GT TE+ + LR++F+R+G CP Sbjct: 70 RRRMAHATRAQVDEVRHVPAALALRQRPAVPGVRSTFGTSTELLNVLRVMFSRLGAHLCP 129 Query: 122 DHDVPLAAQTVSQMVDNVLSQP 143 + V+ D V + Sbjct: 130 NGHRLAPTIDVAADKDLVCPEC 151 Score = 80.8 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 42/197 (21%), Positives = 68/197 (34%), Gaps = 12/197 (6%) Query: 603 KRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQL 662 K +++ GAR +NLKDV++ +P+ I GVSGSGKS+L L+ R+ Sbjct: 2 KGAGRTARNGIQVRGARVHNLKDVSVDVPLDGLVAIAGVSGSGKSSLAMGVLYAEGSRRY 61 Query: 663 NGATIAEPAPYRDIQGLEHFDKVIDID------QSPIGRTPRSNPATYTGVFTPVRELFA 716 A D+V + Q P RS T T + +R +F+ Sbjct: 62 VEALSTYTRRRMAHATRAQVDEVRHVPAALALRQRPAVPGVRSTFGTSTELLNVLRVMFS 121 Query: 717 GVP---ESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNR 773 + P + C C F + C C+G R Sbjct: 122 RLGAHLCPNGHRLAPTIDVAADKDLVCPECGAQFSPPGAESFAFNSGGACPVCQGTGTVR 181 Query: 774 ETLEIKYKG---KTIHE 787 + + ++I + Sbjct: 182 DVDDAALVPDESRSIAD 198 Score = 77.3 bits (189), Expect = 3e-12, Method: Composition-based stats. Identities = 40/143 (27%), Positives = 58/143 (40%), Gaps = 34/143 (23%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 63 I + +R H ++ +++ IP+ +L VTG+SGSGK++L D SL R Sbjct: 507 IRLVTSRLHTVQALDVTIPQGRLTAVTGMSGSGKTTLVLD------------SLVPALRA 554 Query: 64 FLSLMEKPD----VDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFAR----- 114 PD VD G+S ++ N RSTV T + I D LR +A Sbjct: 555 TADNTPLPDHVVSVDT-AGVSRVDVVDASPIGVNVRSTVATYSGILDELRRAYAASDAAK 613 Query: 115 ------------VGEPRCPDHDV 125 G RCP + Sbjct: 614 DRGLTAADFSYNTGSLRCPRCEG 636 >UniRef50_A6VPU1 ABC transporter related n=1 Tax=Actinobacillus succinogenes 130Z RepID=A6VPU1_ACTSZ Length = 754 Score = 567 bits (1462), Expect = e-160, Method: Composition-based stats. Identities = 231/723 (31%), Positives = 366/723 (50%), Gaps = 61/723 (8%) Query: 221 FETALELSGGTAVVADMDDPKAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTC 280 E + + V D L + P G SM +S N+P G CP C Sbjct: 87 VEQKTAGANARSTVGTAVDIAPLLRLMFSRIGEPSAGGSM------AYSPNHPLGMCPHC 140 Query: 281 DGLGVQQYFDPDRVIQNPELSLAGGAIRGWDRRNFYYFQMLKSLADHYKFDVEAPWGSLS 340 GLG Q D R+ + SL+ GAI + + + + + S Sbjct: 141 TGLGEQLVLDESRLF-DVNKSLSEGAILFSQFSAGWQTYLYQ---ANPLLSADKKLRDFS 196 Query: 341 ANVHKVVLYGSGKENIEFKYMNDRGDTSIRRHPFEGVLHNMERRYKETE----SSAVREE 396 +++ GS + N+ G + + +EGVL R Y + ++++E Sbjct: 197 DKEWEILKNGSEQPIKIEIRSNNTG--RVDKVDYEGVLPRFRRLYLSRDISKLKQSLQDE 254 Query: 397 LAKFISNRPCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIA 456 +A + C C+G+ L +A + + ++ G + + + Sbjct: 255 IASLVHQGECPHCQGSGLNEKALASKINGNNILHFQSLTAGELLGELQRIT-----HPVG 309 Query: 457 EKILKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPS 516 + + +++ L + +G+NYL+++R +TLSG E QR+++ + L + Y+ DEP+ Sbjct: 310 KSLAEQMCGTLGKMAEIGINYLSMNRPTDTLSGEELQRLKMVRHLDGSLNNITYIFDEPT 369 Query: 517 IGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGP 576 GLH D +++ L LRD N V+VVEH+ I AD ++++G AG GG++V +G Sbjct: 370 AGLHPADAQKIGRILQQLRDRHNNVLVVEHNRQMIELADEIVELGERAGSQGGKIVYQGD 429 Query: 577 LEAIMAVPESLTGQYMSGKRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFT 636 + + E+LT + + K ++ + + L + +NLK+V+ +P G+ T Sbjct: 430 IHKLRQA-ETLTAKMLMEKVRLNLAP----LAWTESFALENIKLHNLKNVSTVIPKGVLT 484 Query: 637 CITGVSGSGKSTLINDTLFPIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRT 696 I+GV+GSGKS+L + + + + IDQ PIG + Sbjct: 485 AISGVAGSGKSSLAQAFV-------------------------RRYSEAVFIDQKPIGTS 519 Query: 697 PRSNPATYTGVFTPVRELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFL 756 RS PATYTGV +R+LFA +A G FSFN +GG C C+G G I +M F Sbjct: 520 VRSTPATYTGVMDDIRKLFA-----KANGTDASMFSFNAKGG-CPVCKGTGQISYDMAFA 573 Query: 757 PDIYVPCDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDV 816 + V C++C G+RY+R L Y+GK I +VL +TIE+A EFFD P + + LQ+L+DV Sbjct: 574 EPVVVQCEECGGRRYSRTALSFHYQGKNIEDVLALTIEQAAEFFDN-PKICKALQSLLDV 632 Query: 817 GLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLH 876 GL Y+ LGQ +TLSGGE QRVKLA EL + G +Y+LDEP+TGLH D QLL +L Sbjct: 633 GLGYLTLGQPTSTLSGGEVQRVKLAAELQQSG---KIYVLDEPSTGLHQNDAMQLLSLLR 689 Query: 877 KLRDQGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFL 936 +L GNT++++EH L++I ADW++D+G GGS GG+++ +GT + C+ S TA+FL Sbjct: 690 QLVKNGNTVIIVEHRLELIAAADWVIDMGEGGGSAGGKVMFAGTVAELLNCKRSKTAKFL 749 Query: 937 KPM 939 Sbjct: 750 AEY 752 Score = 174 bits (442), Expect = 1e-41, Method: Composition-based stats. Identities = 83/302 (27%), Positives = 125/302 (41%), Gaps = 53/302 (17%) Query: 2 DKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYA 61 D+I++ A +NLK+I L +P+ KL+V G+SGSGKSSL FDTL E R++ Y Sbjct: 4 DQIQIIDAHENNLKHIKLTLPKGKLVVFVGVSGSGKSSLVFDTLAVESYRQWQAGYPLYL 63 Query: 62 RQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPR-- 119 R + E+P + I GL+PA+ +EQK+ N RSTVGT +I LRL+F+R+GEP Sbjct: 64 RNKMPHYERPKIGAIYGLTPAVVVEQKTAGANARSTVGTAVDIAPLLRLMFSRIGEPSAG 123 Query: 120 -------------CPDHDVPLAAQTVSQ--MVDNVLSQPEGKRLMLLAPIIKERKGEHTK 164 CP + + + D S EG +L + Sbjct: 124 GSMAYSPNHPLGMCPHCTGLGEQLVLDESRLFDVNKSLSEGA---ILFSQFSAGWQTYLY 180 Query: 165 TLENLASQGYIRARIDGEVCDLSD--PPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFE 222 L S D ++ D SD L+ + I + ++R + T R+ + Sbjct: 181 QANPLLS-------ADKKLRDFSDKEWEILKNGSEQPI-----KIEIRSNNTGRVDKV-- 226 Query: 223 TALELSGGTAVVADMDDPKAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDG 282 D + F + + L+ + S G CP C G Sbjct: 227 ----------------DYEGVLPRFRRLYLSRDISKLKQSLQDEIASL-VHQGECPHCQG 269 Query: 283 LG 284 G Sbjct: 270 SG 271 Score = 95.4 bits (236), Expect = 1e-17, Method: Composition-based stats. Identities = 44/185 (23%), Positives = 68/185 (36%), Gaps = 45/185 (24%) Query: 2 DKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYA 61 + + + HNLKN++ VIP+ L ++G++GSGKSSLA A+ Sbjct: 459 ESFALENIKLHNLKNVSTVIPKGVLTAISGVAGSGKSSLA----------------QAFV 502 Query: 62 RQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARV------ 115 R++ S A+ I+QK + RST T T + D +R LFA+ Sbjct: 503 RRY---------------SEAVFIDQKPIGTSVRSTPATYTGVMDDIRKLFAKANGTDAS 547 Query: 116 --------GEPRCPDHDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLE 167 G P C ++ V + G+R A + L Sbjct: 548 MFSFNAKGGCPVCKGTGQISYDMAFAEPVVVQCEECGGRRYSRTALSFHYQGKNIEDVLA 607 Query: 168 NLASQ 172 Q Sbjct: 608 LTIEQ 612 Score = 84.3 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 42/149 (28%), Positives = 59/149 (39%), Gaps = 8/149 (5%) Query: 609 PEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIA 668 +++ A NNLK + LTLP G GVSGSGKS+L+ DTL + RQ Sbjct: 2 HPDQIQIIDAHENNLKHIKLTLPKGKLVVFVGVSGSGKSSLVFDTLAVESYRQWQAGYPL 61 Query: 669 EPAPYRDIQGLEHFDKV------IDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESR 722 + + ++Q G RS T + +R +F+ + E Sbjct: 62 YLRNKMPHYERPKIGAIYGLTPAVVVEQKTAGANARSTVGTAVDIAPLLRLMFSRIGEPS 121 Query: 723 ARGYTPGRFSFNVRGGRCEACQGDGVIKV 751 A G +S N G C C G G V Sbjct: 122 AGGSMA--YSPNHPLGMCPHCTGLGEQLV 148 >UniRef50_Q49WT2 Excinuclease ATPase subunit n=16 Tax=Staphylococcaceae RepID=Q49WT2_STAS1 Length = 753 Score = 566 bits (1458), Expect = e-159, Method: Composition-based stats. Identities = 230/716 (32%), Positives = 354/716 (49%), Gaps = 60/716 (8%) Query: 228 SGGTAVVADMDDPKAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQ 287 + V + D A L + P GYS FSFN+P G C TC+GLG + Sbjct: 92 GNSRSTVGTVSDIYASVRLLWSRIGEPFVGYS------DAFSFNSPNGMCETCEGLGYIE 145 Query: 288 YFDPDRVIQNPELSLAGGAIRGWDRRNFYYFQMLKSLADHYKFDVEAPWGSLSANVHKVV 347 + + ++ + SL GAI K+ D FD + + + + Sbjct: 146 DINLNELL-DWNKSLNEGAINFPSFGPDKERG--KAYRDSGLFDNDKKLKAYTKEELDLF 202 Query: 348 LYGSGKENIEFKYMNDRGDTSIRRHPFEGVLHNMERRY---KETESSAVREELAKFISNR 404 LY +E I+ K + S + G++ R + KE + L + N+ Sbjct: 203 LY---QEPIKLKKPPEEWRKS---AKYVGLIPRFRRIFLGDKEFNKKRYAKHLKNVVENK 256 Query: 405 PCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIG 464 C +C G RL + + + + M++ + F N L A+ I++ + Sbjct: 257 VCPTCNGQRLNSKILSCKIMGKNISDFTQMTVKENLAFLNKLN-----NSTAQFIIEPLR 311 Query: 465 DRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDN 524 +L+ L +GL+YLTL R +LSGGEAQR++L + + L ++Y++DEPS+GLH D Sbjct: 312 KQLEALDYIGLSYLTLDRVTTSLSGGEAQRLKLIRHLNSSLSDLVYIIDEPSVGLHPEDI 371 Query: 525 ERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVP 584 ++ L L+ GNTV++VEHD D I+ AD++ID+GP +G GGE+ +G + +++ Sbjct: 372 AKINEILKSLKHKGNTVLIVEHDPDVIKEADYIIDMGPSSGAQGGEITFKGTYKKLLSSD 431 Query: 585 ESLTGQYMSGKRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGS 644 S TG+ + K + K + L NNL +VT+ +P + T +TGV+GS Sbjct: 432 TS-TGEALRIKHHL----KNEIREAKSFYHLGPVTQNNLNNVTVDIPKHVLTVLTGVAGS 486 Query: 645 GKSTLINDTLFPIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATY 704 GKS+L+ G D + +DQ I + RSN TY Sbjct: 487 GKSSLVKA-------------------------GFAKNDNAVFMDQKAIQGSDRSNLLTY 521 Query: 705 TGVFTPVRELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCD 764 GVF VR F+ + G FS+N +G C C G G I+ E+ F+ + C+ Sbjct: 522 LGVFDRVRNFFS-----KETGLNKSMFSYNSKGA-CPNCGGKGYIETELAFMGEFSQTCE 575 Query: 765 QCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLG 824 C GKRY E L G +I + L++T++E FFD + KLQ + GL Y+ LG Sbjct: 576 VCHGKRYKPEVLNATIDGYSIADFLELTVDEGIRFFDKENEIQSKLQAISKTGLNYVTLG 635 Query: 825 QSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNT 884 Q +TLSGGE QRVKL + L+ T +++I DEPTTGLH ADI L++ + L +Q NT Sbjct: 636 QPLSTLSGGEIQRVKLGQYLNDDVTD-SIFIFDEPTTGLHEADIPILINCFNDLIEQNNT 694 Query: 885 IVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLKPML 940 +++IEHNL ++ ADWI+D+GP G GG+I SG P + + T++ LK + Sbjct: 695 VILIEHNLSIMCDADWIIDVGPGPGLDGGKIQFSGYPINFVKENKTLTSKHLKLYI 750 Score = 168 bits (425), Expect = 1e-39, Method: Composition-based stats. Identities = 70/218 (32%), Positives = 111/218 (50%), Gaps = 22/218 (10%) Query: 1 MDKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAY 60 M+ I + GA +NLKNIN+ IP+ + V TG SGSGKSSL F T+ AE ++ ES S+Y Sbjct: 1 MNDITIIGASQNNLKNINITIPKHLVTVFTGRSGSGKSSLVFRTIAAESEQLLNESYSSY 60 Query: 61 ARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPR- 119 + L+ KP V+ I+ L A++I QK + N RSTVGT+++I+ +RLL++R+GEP Sbjct: 61 IQFHLNKQPKPKVNAIKNLPVAMTISQKRFNGNSRSTVGTVSDIYASVRLLWSRIGEPFV 120 Query: 120 --------------CPDHDVP--LAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHT 163 C + + +++++D S EG KER + Sbjct: 121 GYSDAFSFNSPNGMCETCEGLGYIEDINLNELLDWNKSLNEGAINFPSFGPDKERGKAYR 180 Query: 164 K--TLENLAS-QGYIRARIDGEVCDLSDPPKLELQKKH 198 +N + Y + +D + +P KL+ + Sbjct: 181 DSGLFDNDKKLKAYTKEELD--LFLYQEPIKLKKPPEE 216 Score = 83.9 bits (206), Expect = 3e-14, Method: Composition-based stats. Identities = 45/142 (31%), Positives = 72/142 (50%), Gaps = 8/142 (5%) Query: 615 LTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAEPAPYR 674 + GA NNLK++ +T+P L T TG SGSGKS+L+ T+ +++ LN + + + Sbjct: 6 IIGASQNNLKNINITIPKHLVTVFTGRSGSGKSSLVFRTIAAESEQLLNESYSSYIQFHL 65 Query: 675 DIQGLEHFDKV------IDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESRARGYTP 728 + Q + + + I Q RS T + ++ VR L++ + E GY+ Sbjct: 66 NKQPKPKVNAIKNLPVAMTISQKRFNGNSRSTVGTVSDIYASVRLLWSRIGEP-FVGYS- 123 Query: 729 GRFSFNVRGGRCEACQGDGVIK 750 FSFN G CE C+G G I+ Sbjct: 124 DAFSFNSPNGMCETCEGLGYIE 145 Score = 70.8 bits (172), Expect = 3e-10, Method: Composition-based stats. Identities = 33/154 (21%), Positives = 57/154 (37%), Gaps = 45/154 (29%) Query: 9 ARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQFLSLM 68 +NL N+ + IP+ L V+TG++GSGKSSL + +A+ Sbjct: 460 VTQNNLNNVTVDIPKHVLTVLTGVAGSGKSSLV---------------KAGFAKN----- 499 Query: 69 EKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARV-----------GE 117 D+ A+ ++QK+ + RS + T + D +R F++ + Sbjct: 500 -----DN------AVFMDQKAIQGSDRSNLLTYLGVFDRVRNFFSKETGLNKSMFSYNSK 548 Query: 118 PRCPDHDVPLAAQTVSQM---VDNVLSQPEGKRL 148 CP+ +T GKR Sbjct: 549 GACPNCGGKGYIETELAFMGEFSQTCEVCHGKRY 582 >UniRef50_C7NL29 Excinuclease ATPase subunit n=1 Tax=Kytococcus sedentarius DSM 20547 RepID=C7NL29_KYTSD Length = 875 Score = 564 bits (1453), Expect = e-159, Method: Composition-based stats. Identities = 246/740 (33%), Positives = 354/740 (47%), Gaps = 73/740 (9%) Query: 234 VADMDDPKAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDR 293 V + + + C L+ FS N GACP C GLGV Sbjct: 118 VGTVTHTGNTLRMVFSR--CGDYPTGAAHLDSDAFSVNTAVGACPECSGLGVVHEPTEAS 175 Query: 294 VIQNPELSLAGGAIRGWDRRNFYYFQMLKSLADHYKFDVEAPWGSLSANVHKVVLYGSGK 353 ++ +P+LS+A GAI W + + + + +D+ + W L A + +L+ + Sbjct: 176 MVPDPDLSIAEGAIAAW--PGAWQGKNYRDITATLGYDITSSWRDLPAADRQWILFTDDQ 233 Query: 354 ENIEFKYMNDRGD-TSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGT 412 ++ D F + R ET+S+ +F+ PC +C+G Sbjct: 234 PVVQVVPERDPERIQRPYSGTFSSARRYLMRTLSETKSATQWARALRFVETTPCPACDGH 293 Query: 413 RLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDRLKF--- 469 LR +A V + LP + + + + + A + + E Sbjct: 294 GLRADALAVTWQGRSLPDAAALPLAELADLARRRRHALPDEGGSAREGAERLLLGDLLAR 353 Query: 470 ---LVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNER 526 L+ +GL +L+L R + T+S GE QR+RLA+ + GL GV+YVLDEPS GLH RD E Sbjct: 354 LDVLLELGLGHLSLGRRSTTVSPGEMQRLRLATLLHTGLFGVVYVLDEPSAGLHPRDTEA 413 Query: 527 LLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPES 586 LL L L D GNTV+VVEHD + A D V+D+GPGAG GG V+ GP++ + V ES Sbjct: 414 LLRVLRRLVDAGNTVLVVEHDMAVVAACDWVVDVGPGAGEGGGRVLHSGPVDELAGVAES 473 Query: 587 LTGQYMSGK----------------------RKIEVPKKRVPANPEKVLKLTGARGNNLK 624 +TG+Y++ + P L +G R + ++ Sbjct: 474 VTGRYLAQPIHPAEVLGADATGGSTSAGTPGDDLAAEPLPAPRTGSGQLVASGLRRHTVR 533 Query: 625 DVTLTLPVGLFTCITGVSGSGKSTLINDTL------------------------------ 654 V LTLP+G + +TGVSGSGKS+L++ Sbjct: 534 GVDLTLPLGAVSVVTGVSGSGKSSLLDALADVVAMHAQEVSTEAAEEHGEPGTQDVGHPG 593 Query: 655 ----------FPIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATY 704 + PAP R + ++++ I Q PIGR+PRS ATY Sbjct: 594 EGHPGEDAAGAALTASGTGTGQGTPPAPARVVLTGGRVERLVRITQKPIGRSPRSTLATY 653 Query: 705 TGVFTPVRELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCD 764 TG +R LFA +++ RGY GRFSFN GRC C+G G + VE+ F+P Y C Sbjct: 654 TGAMDRIRSLFAATDDAQERGYGAGRFSFNTTPGRCPTCEGQGSVSVELLFMPGTYSTCP 713 Query: 765 QCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLG 824 +C G RY+ ETL++ ++G I EVL T+ EARE F P LAR L D+GL Y+ LG Sbjct: 714 ECHGARYDAETLQVHWEGHRIDEVLGWTVAEARERFAEHPQLARTFGALADLGLDYLTLG 773 Query: 825 QSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNT 884 AT LSGGEAQR+KLA EL + TLY+ DEPTTGLH AD+ +LL LH L +T Sbjct: 774 HPATDLSGGEAQRIKLATELRVQRRTPTLYLFDEPTTGLHPADVHRLLRQLHGLAGASHT 833 Query: 885 IVVIEHNLDVIKTADWIVDL 904 +V+ EH+ + TAD +V++ Sbjct: 834 VVLAEHDAVAVATADHVVEM 853 Score = 145 bits (365), Expect = 1e-32, Method: Composition-based stats. Identities = 78/273 (28%), Positives = 125/273 (45%), Gaps = 30/273 (10%) Query: 693 IGRTPRSNPAT------YTGVFTPVRELFAGVPESRARGYTPGRFSFNVRGGRCEACQGD 746 I + R PA +T V+ + PE R Y+ S R + Sbjct: 212 ITSSWRDLPAADRQWILFTDDQPVVQVVPERDPERIQRPYSGTFSSARRYLMRTLSETKS 271 Query: 747 GVI-KVEMHFLPDIYVPCDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAVP- 804 + F+ PC C G + L + ++G+++ + + + E + Sbjct: 272 ATQWARALRFVE--TTPCPACDGHGLRADALAVTWQGRSLPDAAALPLAELADLARRRRH 329 Query: 805 -------------------ALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELS 845 L +L L+++GL ++ LG+ +TT+S GE QR++LA L Sbjct: 330 ALPDEGGSAREGAERLLLGDLLARLDVLLELGLGHLSLGRRSTTVSPGEMQRLRLAT-LL 388 Query: 846 KRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADWIVDLG 905 G +Y+LDEP+ GLH D + LL VL +L D GNT++V+EH++ V+ DW+VD+G Sbjct: 389 HTGLFGVVYVLDEPSAGLHPRDTEALLRVLRRLVDAGNTVLVVEHDMAVVAACDWVVDVG 448 Query: 906 PEGGSGGGEILVSGTPETVAECEASHTARFLKP 938 P G GGG +L SG + +A S T R+L Sbjct: 449 PGAGEGGGRVLHSGPVDELAGVAESVTGRYLAQ 481 Score = 140 bits (354), Expect = 2e-31, Method: Composition-based stats. Identities = 56/117 (47%), Positives = 84/117 (71%), Gaps = 2/117 (1%) Query: 3 KIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYAR 62 I V GAR HNL+++ + IPRD+L+ VTG+SGSGKSSLAF T++AE QRRY E+++ +AR Sbjct: 21 HITVTGARLHNLRDVTVSIPRDRLVAVTGVSGSGKSSLAFGTVHAEAQRRYFETVAPFAR 80 Query: 63 QFLSLMEKPDVDHIEGLSPAISIEQK--STSHNPRSTVGTITEIHDYLRLLFARVGE 117 + + P V I GL PA+++ Q+ ++ + RSTVGT+T + LR++F+R G+ Sbjct: 81 RLIHAAVDPQVRSITGLPPAVALGQQATTSGTSSRSTVGTVTHTGNTLRMVFSRCGD 137 Score = 75.4 bits (184), Expect = 1e-11, Method: Composition-based stats. Identities = 48/179 (26%), Positives = 74/179 (41%), Gaps = 12/179 (6%) Query: 592 MSGKRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLIN 651 M+ +PA+ + + +TGAR +NL+DVT+++P +TGVSGSGKS+L Sbjct: 1 MTSGSPSIPTAPTLPASSDGHITVTGARLHNLRDVTVSIPRDRLVAVTGVSGSGKSSLAF 60 Query: 652 DTLFPIAQRQLNGATIAEPAPYRDIQGLEHFDKV------IDIDQS--PIGRTPRSNPAT 703 T+ AQR+ + + + Q G + RS T Sbjct: 61 GTVHAEAQRRYFETVAPFARRLIHAAVDPQVRSITGLPPAVALGQQATTSGTSSRSTVGT 120 Query: 704 YTGVFTPVRELFAGVPE--SRARGYTPGRFSFNVRGGRCEACQGDGVIK--VEMHFLPD 758 T +R +F+ + + A FS N G C C G GV+ E +PD Sbjct: 121 VTHTGNTLRMVFSRCGDYPTGAAHLDSDAFSVNTAVGACPECSGLGVVHEPTEASMVPD 179 Score = 71.6 bits (174), Expect = 2e-10, Method: Composition-based stats. Identities = 38/156 (24%), Positives = 59/156 (37%), Gaps = 34/156 (21%) Query: 3 KIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSL---AFDTLYAEGQRRYVESLSA 59 ++ G R H ++ ++L +P + VVTG+SGSGKSSL D + Q E+ Sbjct: 521 QLVASGLRRHTVRGVDLTLPLGAVSVVTGVSGSGKSSLLDALADVVAMHAQEVSTEAAEE 580 Query: 60 YARQFLSLMEKP-----------------DVDHIEGLSPA--------------ISIEQK 88 + + P +G PA + I QK Sbjct: 581 HGEPGTQDVGHPGEGHPGEDAAGAALTASGTGTGQGTPPAPARVVLTGGRVERLVRITQK 640 Query: 89 STSHNPRSTVGTITEIHDYLRLLFARVGEPRCPDHD 124 +PRST+ T T D +R LFA + + + Sbjct: 641 PIGRSPRSTLATYTGAMDRIRSLFAATDDAQERGYG 676 >UniRef50_D1AQT8 ABC transporter related protein n=1 Tax=Sebaldella termitidis ATCC 33386 RepID=D1AQT8_SEBTE Length = 752 Score = 562 bits (1449), Expect = e-158, Method: Composition-based stats. Identities = 249/809 (30%), Positives = 409/809 (50%), Gaps = 86/809 (10%) Query: 134 QMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARIDGEVCDLSDPPKLE 193 +++ GK ++ I + + ++T + Q + + PK++ Sbjct: 25 KIIVVTGISGSGKSSLVFDTIASQSQRLLSETFSSYIQQ----------LLPHYEQPKVD 74 Query: 194 LQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVADMDDPKAEELLFSANFAC 253 + +++++ K+ + V + D A L + A Sbjct: 75 RISNLPVSIIINQNKIT-----------------GNARSTVGTITDIYASLRLLFSRIAK 117 Query: 254 PICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPELSLAGGAIRGWDRR 313 P GYSM +SFN+P G CP C GLGV + + +I N E SL GA++ + Sbjct: 118 PFIGYSM------NYSFNSPEGMCPKCKGLGVIKEINIKSLI-NFEKSLNSGAVQFPTFQ 170 Query: 314 NFYYFQMLKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKENIEFKYMNDRGDTSIRRHP 373 + L + FD + ++N ++LY +G + Sbjct: 171 SG--GWRLTRYTESGNFDNDKKIKEYTSNELSMLLYNTGS------SPKSPTKNWHKTAR 222 Query: 374 FEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGTRLRREARHVYVENTPLPAISD 433 + G++ + + + ET+++ +++L + + R C C GTR+ ++ R + N + Sbjct: 223 YVGLIPRITKAFIETDNTKYKKDLERILEIRICTECSGTRVNKKVRSAKILNNSISDCVS 282 Query: 434 MSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQ 493 +S+ F + +K E IL ++ +L+ L ++GL+YLTL+R+ TLSGGE+Q Sbjct: 283 LSLDELRIFLDKIK-----EPEVEIILMDLKTKLESLQSLGLSYLTLNRATTTLSGGESQ 337 Query: 494 RIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRA 553 RI++A + + L ++Y+ DE S GLH D ++ L L+ GNT+I+V+HD D I+ Sbjct: 338 RIKIAKHLNSSLSDILYIFDELSTGLHPEDLTGIIKILYKLKQKGNTIILVDHDPDIIKI 397 Query: 554 ADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEVPKKRVPANPEKVL 613 ADH+I++G GAGV+GG V +G E ++A ++LT + ++ + K+ N ++ Sbjct: 398 ADHIINLGEGAGVNGGCVTYQGTYEGLLAS-DTLTSKALNTSHLLNNKKR----NFQEFY 452 Query: 614 KLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAEPAPY 673 +L NN+K++++ +P FT +TGV+GSGKS+LI Sbjct: 453 ELQNVSLNNIKNISIKIPKNAFTVVTGVAGSGKSSLIRHLFKN----------------- 495 Query: 674 RDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESRARGYTPGRFSF 733 F + +DQSP+ + RSN +Y GVF ++ LF+ V FS+ Sbjct: 496 -------KFSDAMILDQSPVHSSSRSNILSYLGVFDTIKTLFSKVSSK-----NISHFSY 543 Query: 734 NVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKYKGKTIHEVLDMTI 793 N +G C C+G G IK+++ FL D C+ C+GKR+N ETL YK K I +VL++T+ Sbjct: 544 NGKGA-CPVCKGKGYIKLDLAFLGDTKQLCEGCRGKRFNNETLSYYYKNKNIDDVLNLTV 602 Query: 794 EEAREFFD--AVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQ 851 +EA FFD L+R L L L Y++LGQS T SGGE QR+K+A+ L ++ Sbjct: 603 KEAESFFDDTNSEKLSRMLSCLTMANLDYLKLGQSLDTFSGGELQRLKIAKTLFEK--NS 660 Query: 852 TLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADWIVDLGPEGGSG 911 L ILDEP+TGLH +D+Q LL++ L GNT++V+EHNL +I A+WI+DLG GG Sbjct: 661 KLLILDEPSTGLHESDVQNLLELFFVLVKNGNTLIVLEHNLSIISQAEWIIDLGLYGGVL 720 Query: 912 GGEILVSGTPETVAECEASHTARFLKPML 940 GG+I+ G P + + S TA+ LK L Sbjct: 721 GGKIIFQGYPGDIIDHPVSLTAKHLKKFL 749 Score = 184 bits (468), Expect = 1e-44, Method: Composition-based stats. Identities = 69/179 (38%), Positives = 97/179 (54%), Gaps = 20/179 (11%) Query: 1 MDKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAY 60 MD I++ ART+NLKNI+L IP+ K+IVVTG+SGSGKSSL FDT+ ++ QR E+ S+Y Sbjct: 1 MDNIQIINARTNNLKNISLEIPKRKIIVVTGISGSGKSSLVFDTIASQSQRLLSETFSSY 60 Query: 61 ARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPR- 119 +Q L E+P VD I L +I I Q + N RSTVGTIT+I+ LRLLF+R+ +P Sbjct: 61 IQQLLPHYEQPKVDRISNLPVSIIINQNKITGNARSTVGTITDIYASLRLLFSRIAKPFI 120 Query: 120 --------------CPDHD--VPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEH 162 CP + + +++ S G + P + Sbjct: 121 GYSMNYSFNSPEGMCPKCKGLGVIKEINIKSLINFEKSLNSGA---VQFPTFQSGGWRL 176 Score = 139 bits (351), Expect = 5e-31, Method: Composition-based stats. Identities = 61/197 (30%), Positives = 100/197 (50%), Gaps = 13/197 (6%) Query: 402 SNRPCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILK 461 + + C C G R E Y +N + + ++++ A FF++ + Sbjct: 568 TKQLCEGCRGKRFNNETLSYYYKNKNIDDVLNLTVKEAESFFDDTN------------SE 615 Query: 462 EIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQ 521 ++ L L L+YL L +S +T SGGE QR+++A + + +LDEPS GLH+ Sbjct: 616 KLSRMLSCLTMANLDYLKLGQSLDTFSGGELQRLKIAKTL-FEKNSKLLILDEPSTGLHE 674 Query: 522 RDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIM 581 D + LL L GNT+IV+EH+ I A+ +ID+G GV GG+++ +G I+ Sbjct: 675 SDVQNLLELFFVLVKNGNTLIVLEHNLSIISQAEWIIDLGLYGGVLGGKIIFQGYPGDII 734 Query: 582 AVPESLTGQYMSGKRKI 598 P SLT +++ KI Sbjct: 735 DHPVSLTAKHLKKFLKI 751 Score = 92.0 bits (227), Expect = 1e-16, Method: Composition-based stats. Identities = 45/143 (31%), Positives = 72/143 (50%), Gaps = 8/143 (5%) Query: 614 KLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAEPAPY 673 ++ AR NNLK+++L +P +TG+SGSGKS+L+ DT+ +QR L+ + Sbjct: 5 QIINARTNNLKNISLEIPKRKIIVVTGISGSGKSSLVFDTIASQSQRLLSETFSSYIQQL 64 Query: 674 RDIQGLEHFDKV------IDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESRARGYT 727 D++ I I+Q+ I RS T T ++ +R LF+ + ++ Sbjct: 65 LPHYEQPKVDRISNLPVSIIINQNKITGNARSTVGTITDIYASLRLLFSRI--AKPFIGY 122 Query: 728 PGRFSFNVRGGRCEACQGDGVIK 750 +SFN G C C+G GVIK Sbjct: 123 SMNYSFNSPEGMCPKCKGLGVIK 145 Score = 78.5 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 33/154 (21%), Positives = 58/154 (37%), Gaps = 41/154 (26%) Query: 5 EVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQF 64 E++ +N+KNI++ IP++ VVTG++GSGKSSL R Sbjct: 453 ELQNVSLNNIKNISIKIPKNAFTVVTGVAGSGKSSL--------------------IRHL 492 Query: 65 LSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARV--------- 115 A+ ++Q + RS + + + D ++ LF++V Sbjct: 493 FKNKFSD----------AMILDQSPVHSSSRSNILSYLGVFDTIKTLFSKVSSKNISHFS 542 Query: 116 --GEPRCPDHDVPLAAQTVSQMVDNVLSQPEGKR 147 G+ CP + + + EG R Sbjct: 543 YNGKGACPVCKGKGYIKLDLAFLGDTKQLCEGCR 576 >UniRef50_A6CCN1 Excinuclease ABC subunit A n=1 Tax=Planctomyces maris DSM 8797 RepID=A6CCN1_9PLAN Length = 873 Score = 561 bits (1445), Expect = e-158, Method: Composition-based stats. Identities = 240/555 (43%), Positives = 335/555 (60%), Gaps = 5/555 (0%) Query: 390 SSAVREELAKFISNRPCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLK-- 447 S + E + S C C+G+RL A V V + + + I + Sbjct: 319 SGLISIESSGGRSAETCPHCQGSRLNASALAVRVNGSNIDQLGQQPIQQIGAWLEQFSEG 378 Query: 448 LAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVG 507 L K +L+EI +RL L +GL YLTL+R+ TLS GE QR L S + + LV Sbjct: 379 LTATETKPLAPLLREIRERLSLLNELGLGYLTLNRTRSTLSSGEIQRTALTSLLSSNLVN 438 Query: 508 VMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVH 567 +YVLDEPS GLH D+ R+L L LR L NT+++VEHD IRAA++VI++GP AG Sbjct: 439 TLYVLDEPSSGLHPADSHRVLTVLQKLRQLNNTLLIVEHDAAFIRAAEYVIELGPAAGRA 498 Query: 568 GGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEVPKKRVPANPEKVLKLTGARGNNLKDVT 627 GGEV+ GPLEA++A S T ++++ + + + LT A NNL+++T Sbjct: 499 GGEVIFSGPLEALLASNSSPTSRFLNTAENRALKSVPDQPT-SEWITLTDASRNNLQNIT 557 Query: 628 LTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAEPAP-YRDIQGLEHFDKVI 686 + P+ + +TG+SGSGKS+LI TLFP+ +L+ + A + + G E D+VI Sbjct: 558 VKFPLRQLSVVTGISGSGKSSLIEQTLFPLLAAELSETGTSPLADGCQSLSGAEQIDEVI 617 Query: 687 DIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESRARGYTPGRFSFNVR-GGRCEACQG 745 +D S G+ PRS PATY +F +R +FA P++R R +PG FSFN + GGRC C+G Sbjct: 618 LLDHSFTGQNPRSIPATYLNLFDDIRSIFAQTPDARLRNLSPGHFSFNSKSGGRCPVCKG 677 Query: 746 DGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAVPA 805 G I++++ FL DI + C +C GKRY RE LEIKY+ I EVL +T++EA FF PA Sbjct: 678 TGKIEIDLQFLADISMDCQECHGKRYQRELLEIKYRKLNIAEVLKLTVDEAFPFFRGQPA 737 Query: 806 LARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHF 865 L +KL+ L DVGL Y+ LGQ TLSGGE QR+KLA L+ +TL++++EPT GLH Sbjct: 738 LQKKLKQLKDVGLGYLPLGQPLPTLSGGECQRLKLAAYLNTSSRNKTLFLMNEPTRGLHP 797 Query: 866 ADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVA 925 DIQ +L+ H L G++I++IEHNLD+I+ AD I+DLGPEGG+ GG I+V+GTP VA Sbjct: 798 LDIQSVLNCFHYLLTAGHSIILIEHNLDLIRAADHIIDLGPEGGAEGGRIVVTGTPAEVA 857 Query: 926 ECEASHTARFLKPML 940 S+T L Sbjct: 858 AHPTSYTGMALNAKF 872 Score = 298 bits (764), Expect = 6e-79, Method: Composition-based stats. Identities = 115/308 (37%), Positives = 165/308 (53%), Gaps = 24/308 (7%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 63 I+VRG R HNLK+I+L IP ++LI V G+SGSGK+SLAFDTLYAEGQRRY+E+LS ARQ Sbjct: 18 IQVRGVRVHNLKSIDLDIPLNQLIAVCGVSGSGKTSLAFDTLYAEGQRRYLETLSPSARQ 77 Query: 64 FLSLMEKPDVDHIEGLSPAISIEQKS-----TSHNPRSTVGTITEIHDYLRLLFARVGEP 118 +L+ + KPD D I + PAI++ Q + TS +T G + I YLRLLF+ G+ Sbjct: 78 YLNQLPKPDADQITQIPPAIALRQNTSQRHFTSRGLETTAGIESGIQHYLRLLFSASGQI 137 Query: 119 RCPDHDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRAR 178 CPD ++P++ Q+ ++ + + P R + P+ E + ++ L QG R Sbjct: 138 FCPDCEIPISPQSPETVLAFIKTLPTDLRFQICYPVTTEEHSSP-EIMQELKQQGLNRVI 196 Query: 179 IDGEVCDLSDPPKLELQK----KHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVV 234 ++ E LSD L + H I VV+DR R R+ ES E A S G + Sbjct: 197 LNHEEYQLSDDLTEPLSQFDTNTHEILVVLDRLSTRSFDDSRILESLEFAFNESAGKVTL 256 Query: 235 ADMDDPKAE--------------ELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTC 280 M+ + FSA+ +CP C + EP+LF+F +P+G C C Sbjct: 257 LVMEPLSGQTTGIPFQIGQRQSFRFDFSADMSCPQCQREFAQPEPQLFNFFSPSGVCTNC 316 Query: 281 DGLGVQQY 288 G G+ Sbjct: 317 GGSGLISI 324 Score = 171 bits (434), Expect = 9e-41, Method: Composition-based stats. Identities = 85/310 (27%), Positives = 134/310 (43%), Gaps = 24/310 (7%) Query: 648 TLINDTLFPIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGV 707 T ++ L + + + + E KV + P+ P G Sbjct: 217 TNTHEILVVLDRLSTRSFDDSRILESLEFAFNESAGKVTLLVMEPLSGQTTGIPFQ-IGQ 275 Query: 708 FTPVRELFAGVPESRARGYT-----PGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVP 762 R F+ P F+F G C C G G+I +E Sbjct: 276 RQSFRFDFSADMSCPQCQREFAQPEPQLFNFFSPSGVCTNCGGSGLISIE-SSGGRSAET 334 Query: 763 CDQCKGKRYNRETLEIKYKGKTIHEV----------------LDMTIEEAREFFDAVPAL 806 C C+G R N L ++ G I ++ +T E + + + Sbjct: 335 CPHCQGSRLNASALAVRVNGSNIDQLGQQPIQQIGAWLEQFSEGLTATETKPLAPLLREI 394 Query: 807 ARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFA 866 +L L ++GL Y+ L ++ +TLS GE QR L LS TLY+LDEP++GLH A Sbjct: 395 RERLSLLNELGLGYLTLNRTRSTLSSGEIQRTALTSLLSSNLVN-TLYVLDEPSSGLHPA 453 Query: 867 DIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAE 926 D ++L VL KLR NT++++EH+ I+ A+++++LGP G GGE++ SG E + Sbjct: 454 DSHRVLTVLQKLRQLNNTLLIVEHDAAFIRAAEYVIELGPAAGRAGGEVIFSGPLEALLA 513 Query: 927 CEASHTARFL 936 +S T+RFL Sbjct: 514 SNSSPTSRFL 523 Score = 88.5 bits (218), Expect = 1e-15, Method: Composition-based stats. Identities = 48/198 (24%), Positives = 77/198 (38%), Gaps = 26/198 (13%) Query: 2 DKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYA 61 + I + A +NL+NI + P +L VVTG+SGSGKSSL TL+ E+ ++ Sbjct: 541 EWITLTDASRNNLQNITVKFPLRQLSVVTGISGSGKSSLIEQTLFPLLAAELSETGTSPL 600 Query: 62 RQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEP--- 118 + E + I ++ T NPRS T + D +R +FA+ + Sbjct: 601 ADGCQSLS-----GAEQIDEVILLDHSFTGQNPRSIPATYLNLFDDIRSIFAQTPDARLR 655 Query: 119 ---------------RCPDHDVPLAAQTVSQMVDNV---LSQPEGKRLMLLAPIIKERKG 160 RCP + Q + ++ + GKR IK RK Sbjct: 656 NLSPGHFSFNSKSGGRCPVCKGTGKIEIDLQFLADISMDCQECHGKRYQRELLEIKYRKL 715 Query: 161 EHTKTLENLASQGYIRAR 178 + L+ + + R Sbjct: 716 NIAEVLKLTVDEAFPFFR 733 Score = 67.3 bits (163), Expect = 3e-09, Method: Composition-based stats. Identities = 33/133 (24%), Positives = 57/133 (42%), Gaps = 11/133 (8%) Query: 599 EVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIA 658 +P + +P ++++ G R +NLK + L +P+ + GVSGSGK++L DTL+ Sbjct: 4 HLPDETAFQHPSSMIQVRGVRVHNLKSIDLDIPLNQLIAVCGVSGSGKTSLAFDTLYAEG 63 Query: 659 QRQLNGATIAEPAPYRDIQGLEHFDKVIDID------QSPIGRTPRSNPATYT-----GV 707 QR+ Y + D++ I Q+ R S T G+ Sbjct: 64 QRRYLETLSPSARQYLNQLPKPDADQITQIPPAIALRQNTSQRHFTSRGLETTAGIESGI 123 Query: 708 FTPVRELFAGVPE 720 +R LF+ + Sbjct: 124 QHYLRLLFSASGQ 136 >UniRef50_UPI0001BC2CF0 putative excinuclease ABC subunit A n=1 Tax=Brevibacterium linens BL2 RepID=UPI0001BC2CF0 Length = 849 Score = 553 bits (1426), Expect = e-156, Method: Composition-based stats. Identities = 234/740 (31%), Positives = 360/740 (48%), Gaps = 38/740 (5%) Query: 232 AVVADMDDPKAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDP 291 + V + + + F L FS N GACPTC G D Sbjct: 99 SSVGTLSQVSDLLRVLFSRFGDYPANQG--RLLASAFSPNTVEGACPTCAAKGRIHEIDL 156 Query: 292 DRVIQNPELSLAGGAIRGWDRRNFYYFQMLKSLADHYKFDVEAPWGSLSANVHKVVLYGS 351 D + + L++ GAI W + + K L + D++ W +L A +L Sbjct: 157 DAAVPDDSLTIREGAIAAW--PGGWLGRNFKHLVETMGIDIDVAWKTLPAETRTWLLTTE 214 Query: 352 GKENIEFKYMNDRGD-TSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCE 410 ++ + F + T S+ +RE +F+SN C C Sbjct: 215 DTPSVTVEPEKILDHVAREYTGKFRSARRYLLDTMVTTSSATIRERTEEFLSNDLCPDCH 274 Query: 411 GTRLRREARHVYVENTPLPAISDMSIGHAM-----EFFNNLKLAGQRAK--------IAE 457 G+R+ A V + + + D S+ +L+ +K A Sbjct: 275 GSRINPAALAVTIGGANIAEVGDHSLTDLAVTINAAIAADLERGPSESKRFSAATDEAAH 334 Query: 458 KILKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSI 517 +L E+ R + +G+ YL RSA TLS GE QR+RLA+ + +GL G++YV DE S Sbjct: 335 VLLDELDKRTDVIERLGVGYLPPKRSAATLSPGELQRLRLAAHLHSGLHGMVYVFDELST 394 Query: 518 GLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPL 577 GLH +D + L + LRD GNTVI+VEHD + +R D VI++GPG G GG+++ GP+ Sbjct: 395 GLHPKDTDHLFTHIEALRDAGNTVILVEHDMEIVRRCDWVIELGPGGGARGGQLMFSGPV 454 Query: 578 EAIMAVPESLTGQYMSGKRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTC 637 + S + + + R P E + T NNL+ + L+ P+G T Sbjct: 455 AEALDGESSTAVRL---RNEAPSEPWRAPQEFEDWARCTSLSANNLRGLALSFPIGGLTT 511 Query: 638 ITGVSGSGKSTLINDTL---FPIAQRQLNGATIA-------------EPAPYRDIQGLEH 681 +TGVSG+GKS+++ +G D GLE Sbjct: 512 LTGVSGAGKSSVLRSVATLARSAGASPFDGEEEPSTISRRSGSGGEGGDLAEADAAGLEV 571 Query: 682 FDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESRARGYTPGRFSFNVRGGRCE 741 FD+V+ DQS IGR+PRS TY G+F +R LFA +R+RG+T +FSFN GRC Sbjct: 572 FDRVVSFDQSTIGRSPRSVIGTYLGIFDKIRSLFAKTDLARSRGFTASQFSFNTARGRCP 631 Query: 742 ACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFD 801 C+G G+I +++ LP C +C+G+R+ ETLE+ + TI +VLD++I+ A F Sbjct: 632 RCEGLGIITIDLVHLPASSGTCPECEGRRFIEETLEVTVEELTIADVLDLSIDAAATVFA 691 Query: 802 AVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLAREL-SKRGTGQTLYILDEPT 860 L + L VGL + LGQS+ TLSGGEAQR++LA + +++ ++L+ILDEP Sbjct: 692 ERLGLVAHFEVLQRVGLGGLLLGQSSATLSGGEAQRLRLAAVMRARKRRERSLFILDEPA 751 Query: 861 TGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGT 920 GLH +D + L + ++ D+G+TI++ +HN+++ +DW++D+GP G GG+I+ +GT Sbjct: 752 NGLHPSDARVLGQLFRQIVDEGDTILIADHNMELAAGSDWLIDMGPGPGPDGGQIVAAGT 811 Query: 921 PETVAECEASHTARFLKPML 940 P VA TA L Sbjct: 812 PLQVATAGVGATAEVLSARF 831 Score = 159 bits (402), Expect = 5e-37, Method: Composition-based stats. Identities = 55/116 (47%), Positives = 82/116 (70%) Query: 2 DKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYA 61 ++I + GAR HNL ++ +P +LI + G+SGSGKSSLAFDT+YAE QRRY+ES+S + Sbjct: 5 EQIGIVGAREHNLSGFSVSLPHRQLIGICGVSGSGKSSLAFDTIYAEAQRRYLESVSPFT 64 Query: 62 RQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGE 117 R L + P VD I GL AI+++Q ++ S+VGT++++ D LR+LF+R G+ Sbjct: 65 RHLLGAVSAPQVDRITGLPAAIAVKQLVSTPPENSSVGTLSQVSDLLRVLFSRFGD 120 Score = 78.1 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 39/150 (26%), Positives = 60/150 (40%), Gaps = 8/150 (5%) Query: 609 PEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIA 668 + + + GAR +NL +++LP I GVSGSGKS+L DT++ AQR+ + Sbjct: 3 MTEQIGIVGAREHNLSGFSVSLPHRQLIGICGVSGSGKSSLAFDTIYAEAQRRYLESVSP 62 Query: 669 EPAPYRDIQGLEHFDKV------IDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPE-- 720 D++ I + Q S+ T + V +R LF+ + Sbjct: 63 FTRHLLGAVSAPQVDRITGLPAAIAVKQLVSTPPENSSVGTLSQVSDLLRVLFSRFGDYP 122 Query: 721 SRARGYTPGRFSFNVRGGRCEACQGDGVIK 750 + FS N G C C G I Sbjct: 123 ANQGRLLASAFSPNTVEGACPTCAAKGRIH 152 Score = 62.3 bits (150), Expect = 9e-08, Method: Composition-based stats. Identities = 39/187 (20%), Positives = 67/187 (35%), Gaps = 32/187 (17%) Query: 12 HNLKNINLVIPRDKLIVVTGLSGSGKSSL--AFDTLY---------AEGQRRYVESLSAY 60 +NL+ + L P L +TG+SG+GKSS+ + TL E + + S Sbjct: 495 NNLRGLALSFPIGGLTTLTGVSGAGKSSVLRSVATLARSAGASPFDGEEEPSTISRRSGS 554 Query: 61 ARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFAR------ 114 + + + D +E +S +Q + +PRS +GT I D +R LFA+ Sbjct: 555 GGEGGD-LAEADAAGLEVFDRVVSFDQSTIGRSPRSVIGTYLGIFDKIRSLFAKTDLARS 613 Query: 115 -----------VGEPRCPDH---DVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKG 160 RCP + + EG+R + + + Sbjct: 614 RGFTASQFSFNTARGRCPRCEGLGIITIDLVHLPASSGTCPECEGRRFIEETLEVTVEEL 673 Query: 161 EHTKTLE 167 L+ Sbjct: 674 TIADVLD 680 >UniRef50_A6BZF4 Excinuclease ABC subunit A n=1 Tax=Planctomyces maris DSM 8797 RepID=A6BZF4_9PLAN Length = 847 Score = 553 bits (1425), Expect = e-155, Method: Composition-based stats. Identities = 236/545 (43%), Positives = 352/545 (64%), Gaps = 7/545 (1%) Query: 402 SNRPCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLK------LAGQRAKI 455 S + C C+G R+ + R + + + + + + + + K ++ Q I Sbjct: 298 SGQICPDCQGARISQYGRSILLNQQSIDQVVQFTAPEIINWLDQWKAGEAQGMSLQDQVI 357 Query: 456 AEKILKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEP 515 A++I I RL++L +GL Y+ LSR ++TLSGGE QR RL + +GAG G Y+LDEP Sbjct: 358 ADQIEPSIRKRLEYLTEIGLGYIQLSRPSKTLSGGELQRARLTACLGAGTTGACYILDEP 417 Query: 516 SIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEG 575 + GLH + ++LL L L+ GNT+IVVEHD D I+AAD+++DIGP AG GG++V G Sbjct: 418 TAGLHANETQKLLRILQRLKQAGNTIIVVEHDHDVIKAADYLVDIGPQAGAEGGKLVFSG 477 Query: 576 PLEAIMAVPESLTGQYMSGKRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLF 635 +A + PES+T Q ++ + + R + E+ ++LTGAR NNLK++++ +P+ Sbjct: 478 DYDAFIQHPESMTAQGLTARFQNSPQAHRSKTSHEQFVQLTGARTNNLKEISVKVPLQQL 537 Query: 636 TCITGVSGSGKSTLINDTLFPIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGR 695 C+TGVSGSGKS+LI +TL P + +LN Y +QG+E+ ++ IDQS +G+ Sbjct: 538 VCVTGVSGSGKSSLIMETLVPAIKSELN-RRPNPALQYDSLQGVEYLQQIKIIDQSALGK 596 Query: 696 TPRSNPATYTGVFTPVRELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHF 755 RSNPATY G++ VR+LF+ +R RGYT RFSFN GRC AC+G GV ++++ F Sbjct: 597 NGRSNPATYCGIWDEVRKLFSKTKTARLRGYTARRFSFNSAEGRCGACRGTGVKRIDLKF 656 Query: 756 LPDIYVPCDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMD 815 LP +++PC++C KR+NR TL + Y+GKT+ +VL+M+I EA EFF+++P + R LQ L+D Sbjct: 657 LPPVFLPCEKCHSKRFNRGTLSVTYRGKTVSDVLEMSIAEAGEFFESIPRIKRILQVLLD 716 Query: 816 VGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVL 875 +GL Y+ LGQ A LSGGEAQR++LA EL G TL++LDEPT GLH DI+ LL L Sbjct: 717 LGLGYLALGQPANLLSGGEAQRLRLASELFAPLNGMTLFVLDEPTRGLHSHDIECLLQTL 776 Query: 876 HKLRDQGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARF 935 ++L D GN+++VIEH+ V+ A+W++DLGPE G+ GG ++ G P +A T R Sbjct: 777 NRLIDAGNSVLVIEHHPQVMCAAEWLIDLGPEAGNAGGYLIDEGPPALIAANRRGATGRM 836 Query: 936 LKPML 940 L ++ Sbjct: 837 LYELI 841 Score = 349 bits (896), Expect = 2e-94, Method: Composition-based stats. Identities = 126/296 (42%), Positives = 187/296 (63%), Gaps = 2/296 (0%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 63 I +RGAR HNLKNI++ +P +++ +VTG+SGSGKSSL FDTL+ EGQRR++E+LS+ RQ Sbjct: 9 IRIRGARCHNLKNIDVDLPHNQISIVTGVSGSGKSSLVFDTLHQEGQRRFLENLSSGTRQ 68 Query: 64 FLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCPDH 123 S + VD I GL P I +Q + RST+ T+TE++D RLL+A++G C + Sbjct: 69 LFSQAQPVAVDQILGLPPTICFDQTQRVQSKRSTLATLTELYDLFRLLYAKLGIVHCVNC 128 Query: 124 DVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARIDGEV 183 L QT Q+VD VL+ + K++M+LAP++ RKG H+ L +A +G++RARIDG V Sbjct: 129 GRALHQQTPEQIVDLVLALEDRKKVMILAPVVSARKGNHSALLNQVAREGFVRARIDGAV 188 Query: 184 CDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVADMDDPKAE 243 D++ P +L H IE+V+DR V++ + RL ES + AL+ GGT +++ + Sbjct: 189 IDITQPHELPEDVPHDIEIVIDRIIVKEGIQSRLKESVDLALKQGGGTCLISHQIESGWS 248 Query: 244 ELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQ--QYFDPDRVIQN 297 + S AC C S + EP FSFN+P GACPTC+GLG+ + ++ + Sbjct: 249 DRYVSTRLACGECNLSFPDPEPVTFSFNSPHGACPTCEGLGIIEPSESESGQICPD 304 Score = 184 bits (468), Expect = 1e-44, Method: Composition-based stats. Identities = 82/233 (35%), Positives = 124/233 (53%), Gaps = 24/233 (10%) Query: 728 PGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKYKGKTIHE 787 P FSFN G C C+G G+I+ + C C+G R ++ I ++I + Sbjct: 270 PVTFSFNSPHGACPTCEGLGIIEPS---ESESGQICPDCQGARISQYGRSILLNQQSIDQ 326 Query: 788 VLDMTIEEAREFFDA--------------------VPALARKLQTLMDVGLTYIRLGQSA 827 V+ T E + D P++ ++L+ L ++GL YI+L + + Sbjct: 327 VVQFTAPEIINWLDQWKAGEAQGMSLQDQVIADQIEPSIRKRLEYLTEIGLGYIQLSRPS 386 Query: 828 TTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVV 887 TLSGGE QR +L L TG YILDEPT GLH + Q+LL +L +L+ GNTI+V Sbjct: 387 KTLSGGELQRARLTACLGAGTTG-ACYILDEPTAGLHANETQKLLRILQRLKQAGNTIIV 445 Query: 888 IEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLKPML 940 +EH+ DVIK AD++VD+GP+ G+ GG+++ SG + + S TA+ L Sbjct: 446 VEHDHDVIKAADYLVDIGPQAGAEGGKLVFSGDYDAFIQHPESMTAQGLTARF 498 Score = 94.3 bits (233), Expect = 2e-17, Method: Composition-based stats. Identities = 60/284 (21%), Positives = 115/284 (40%), Gaps = 37/284 (13%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDT----LYAEGQRRYVESLSA 59 +++ GART+NLK I++ +P +L+ VTG+SGSGKSSL +T + +E RR +L Sbjct: 515 VQLTGARTNNLKEISVKVPLQQLVCVTGVSGSGKSSLIMETLVPAIKSELNRRPNPALQY 574 Query: 60 YARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPR 119 + Q + +++ + I+Q + N RS T I D +R LF++ R Sbjct: 575 DSLQGVEYLQQIKI-----------IDQSALGKNGRSNPATYCGIWDEVRKLFSKTKTAR 623 Query: 120 CPDHDVPLAAQTVSQMVDNVLSQPEGKRLML--LAPIIKERKGEHTKTLENLASQGYIRA 177 + + ++ KR+ L L P+ + H+K G + Sbjct: 624 LRGYTARRFSFNSAEGRCGACRGTGVKRIDLKFLPPVFLPCEKCHSKRFNR----GTLSV 679 Query: 178 RIDGEVCDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVA-- 235 G +SD ++ + + + R+ + L+L G + Sbjct: 680 TYRG--KTVSDVLEMSIAEAGEFF----------ESIPRIKRILQVLLDLGLGYLALGQP 727 Query: 236 --DMDDPKAEELLFSANFACPICGYSMRELEPRLFSFNNPAGAC 277 + +A+ L ++ P+ G ++ L+ ++ C Sbjct: 728 ANLLSGGEAQRLRLASELFAPLNGMTLFVLDEPTRGLHSHDIEC 771 Score = 69.6 bits (169), Expect = 6e-10, Method: Composition-based stats. Identities = 35/121 (28%), Positives = 60/121 (49%), Gaps = 6/121 (4%) Query: 605 VPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNG 664 + +++++ GAR +NLK++ + LP + +TGVSGSGKS+L+ DTL QR+ Sbjct: 1 MRYQNTQMIRIRGARCHNLKNIDVDLPHNQISIVTGVSGSGKSSLVFDTLHQEGQRRFLE 60 Query: 665 ATIAEPAPYRDIQGLEHFDKV------IDIDQSPIGRTPRSNPATYTGVFTPVRELFAGV 718 + D++ I DQ+ ++ RS AT T ++ R L+A + Sbjct: 61 NLSSGTRQLFSQAQPVAVDQILGLPPTICFDQTQRVQSKRSTLATLTELYDLFRLLYAKL 120 Query: 719 P 719 Sbjct: 121 G 121 >UniRef50_B1KWH8 Excinuclease ABC, A subunit n=7 Tax=Clostridium RepID=B1KWH8_CLOBM Length = 790 Score = 549 bits (1415), Expect = e-154, Method: Composition-based stats. Identities = 236/736 (32%), Positives = 384/736 (52%), Gaps = 56/736 (7%) Query: 226 ELSGGTAVVADMDDPKAEELLFSA---NFACPICGYSM---RELEPRLFSFNNPAGACPT 279 + + V L + +++ +L+ FS+ +P G C Sbjct: 86 RQTNSRSTVGSKTGILNMLALLFSNDGKMVNEETNFNIGDDEKLDSSYFSYTSPNGMCMK 145 Query: 280 CDGLGVQQYFDPDRVIQNPELSLAG-----GAIRGWDRRNFYYFQMLKSLADHYKFDVEA 334 C G G + D+VI N E+++ GA G Y +L+ Y + Sbjct: 146 CGGRGKYFNVNIDKVIPNNEITMQQVFKNIGATSG-------YMNLLQRKYHEYFY---T 195 Query: 335 PWGSLSANVHKVVLYGSGKENIEFKYMNDRGDTSIRRHPFEGVLHNMERRYKETESSAVR 394 P+ L ++ ++YG + + V + RY + E+ Sbjct: 196 PFNQLPYDIKDELIYGIPT-------------NNSNNLSYC-VERVLHNRYLQGEN---- 237 Query: 395 EELAKFISNRPCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAK 454 L C SC G R+ EAR V++ + + + +M++ ++ L K Sbjct: 238 --LKGIYEMETCESCHGFRVGEEARSVFLNHRHIGEVGNMTLSQVNDYLQELLPQNTLTK 295 Query: 455 IAEKILKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDE 514 K+ I ++ L+ V L +LTL R +LSGGE QRI L S + +G+ ++Y+ DE Sbjct: 296 FGVKMTNTILKKINALIRVRLGHLTLYREMPSLSGGELQRIFLNSHLDSGMDSLIYIFDE 355 Query: 515 PSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAE 574 P+ GLH+ + + +L +++ L+ GNTVI+VEHD+ I+ A+H+ID+GP AG++GG++V + Sbjct: 356 PTSGLHEFEKQEILQSILKLKKSGNTVIIVEHDKSTIKLAEHIIDVGPKAGIYGGDIVYQ 415 Query: 575 GPLEAIMAVPESLTGQYMSGKRKIEV-PKKRVPANPEKVLKLTGARGNNLKDVTLTLPVG 633 G E ++ S+TG+Y+SG+ V +K + + + A+ NNLKD+T+++P+ Sbjct: 416 GSFEGLLNAKHSITGKYLSGRTPFPVRQRKNLSKTNTNHITIHNAKTNNLKDLTVSIPLN 475 Query: 634 LFTCITGVSGSGKSTLINDTLFPIAQ-------------RQLNGATIAEPAPYRDIQGLE 680 I GVSGSGKS+LI+ TL P+ + + I G+E Sbjct: 476 QLVGIAGVSGSGKSSLISKTLLPLLKNSFYRNTQRIQFDEDYDENISLFRPIVNQIDGME 535 Query: 681 HFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESRARGYTPGRFSFNVRGGRC 740 + ++I Q+PIGR S P +Y ++ +R LF+ P++ + G FSFN +G C Sbjct: 536 NIQGYVEISQAPIGRKMNSTPISYLELWDKIRTLFSQQPKAMQNNLSAGHFSFNSKGA-C 594 Query: 741 EACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFF 800 + C+G G+ + + C +C GKR+N +TL IK+KGK I++VL+M+I EA FF Sbjct: 595 QICKGSGLETISIGNDIHFDKSCHECNGKRFNHDTLSIKFKGKDIYDVLEMSIIEAITFF 654 Query: 801 DAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPT 860 + + L+ L +G+ YI+LGQ TLSGGEAQR+KLA+E+ K+ G LYILDEP+ Sbjct: 655 EDTKLSFKPLKVLEQIGMGYIKLGQPIPTLSGGEAQRIKLAKEIGKQKKGNILYILDEPS 714 Query: 861 TGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGT 920 TGL D +L+ +L +L GN+++VIEH+LD++ + DWI++LG GG GG +L GT Sbjct: 715 TGLSQYDTAKLITLLDELIIDGNSVIVIEHDLDILSSCDWIIELGKGGGIEGGNLLAEGT 774 Query: 921 PETVAECEASHTARFL 936 P+ + E + S T R+L Sbjct: 775 PQQLKENKDSLTGRYL 790 Score = 148 bits (373), Expect = 1e-33, Method: Composition-based stats. Identities = 56/132 (42%), Positives = 81/132 (61%), Gaps = 6/132 (4%) Query: 1 MDKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAY 60 M KI+++ A HNLKNI++ IP+DKLIVVTG+SGSGKSSL FD ++ EG+++Y++SL Sbjct: 1 MKKIKIKNAHMHNLKNIDITIPKDKLIVVTGVSGSGKSSLIFDLIFEEGRKQYLQSLGMS 60 Query: 61 ARQFLSLMEKPDVDHIEGLSPAISIEQKSTSH-NPRSTVGTITEIHDYLRLLFARVGEPR 119 + D I GLSP I+++Q N RSTVG+ T I + L LLF+ G+ Sbjct: 61 L-----EFDDNKFDSITGLSPTIAVKQSLVRQTNSRSTVGSKTGILNMLALLFSNDGKMV 115 Query: 120 CPDHDVPLAAQT 131 + + + Sbjct: 116 NEETNFNIGDDE 127 Score = 89.3 bits (220), Expect = 7e-16, Method: Composition-based stats. Identities = 42/179 (23%), Positives = 69/179 (38%), Gaps = 38/179 (21%) Query: 2 DKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTL--------YAEGQR-- 51 + I + A+T+NLK++ + IP ++L+ + G+SGSGKSSL TL Y QR Sbjct: 453 NHITIHNAKTNNLKDLTVSIPLNQLVGIAGVSGSGKSSLISKTLLPLLKNSFYRNTQRIQ 512 Query: 52 ---RYVESLSAYARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYL 108 Y E++S + +D +E + + I Q ST + E+ D + Sbjct: 513 FDEDYDENISLF------RPIVNQIDGMENIQGYVEISQAPIGRKMNSTPISYLELWDKI 566 Query: 109 RLLF-------------------ARVGEPRCPDHDVPLAAQTVSQMVDNVLSQPEGKRL 148 R LF ++ C + + D + GKR Sbjct: 567 RTLFSQQPKAMQNNLSAGHFSFNSKGACQICKGSGLETISIGNDIHFDKSCHECNGKRF 625 Score = 72.3 bits (176), Expect = 9e-11, Method: Composition-based stats. Identities = 38/145 (26%), Positives = 61/145 (42%), Gaps = 12/145 (8%) Query: 615 LTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQ-LNGATIAEPAPY 673 + A +NLK++ +T+P +TGVSGSGKS+LI D +F ++Q L ++ Sbjct: 6 IKNAHMHNLKNIDITIPKDKLIVVTGVSGSGKSSLIFDLIFEEGRKQYLQSLGMSLEFDD 65 Query: 674 RDIQGLEHFDKVIDIDQSPIGRT-PRSNPATYTGVFTPVRELFAGVPE----------SR 722 + I + QS + +T RS + TG+ + LF+ + Sbjct: 66 NKFDSITGLSPTIAVKQSLVRQTNSRSTVGSKTGILNMLALLFSNDGKMVNEETNFNIGD 125 Query: 723 ARGYTPGRFSFNVRGGRCEACQGDG 747 FS+ G C C G G Sbjct: 126 DEKLDSSYFSYTSPNGMCMKCGGRG 150 >UniRef50_B8I5E2 ABC transporter related n=4 Tax=Clostridium RepID=B8I5E2_CLOCE Length = 783 Score = 543 bits (1400), Expect = e-153, Method: Composition-based stats. Identities = 252/806 (31%), Positives = 392/806 (48%), Gaps = 57/806 (7%) Query: 144 EGKRLMLLAPIIKERKGEHTKTLENLASQGYIR-ARIDGEVCDLSDPPKLELQKKHTIEV 202 +L ++ + K + L +G R G + P + + V Sbjct: 23 PKNKLTVITGVSGSGKSSLA--FDTLYEEGKRRYLMFSGTQFMIDSTPTFDSISGLSPTV 80 Query: 203 VVDRFKVRDDLTQRLAESFETALELSGGTAVVADMDDPKAEELLFSANFACPICGYS-MR 261 V++ + S + V + A + Y Sbjct: 81 AVEQRII----------------RQSNPRSTVGTRTKIGNILAMLFAAYGTRDSKYDDGL 124 Query: 262 ELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPELSLAGGAIRGWDRRNFYYFQML 321 L +F N+P G C C G G + D D++ + L + + R + +ML Sbjct: 125 PLSMEMFQKNSPKGMCVKCLGSGTVKKVDEDKLFGDLSLKVEDVCLGLGKRGST--KKML 182 Query: 322 KSLADHYKFDVEAPWGSLSANVHKVVLYGSGKENIEFKYMNDRGDTSIRRHPFEGVLHNM 381 S ++ + SL+ + YG ++ + + P+ + H Sbjct: 183 DSFYKYHNISPDQKLSSLTDEQLFCLKYGDSGKS-----------SFMGFIPW--IFHVT 229 Query: 382 ERRYKETESSAVREELAKFISNRPCASCEGTRLRREARHVYVENTPLPAISDMSIGHAME 441 + + A +++ C C GT L A + + + ++ I + Sbjct: 230 NGAFSTNSRLSHLLTEAGYMTKPSCPKCGGTGLGVHASSTTIGGKTISELENIYIKDLFD 289 Query: 442 FFNNLKLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQI 501 F N L +L EI +L +V+VGL++L+LSR TLSGGE QR+ LAS I Sbjct: 290 FLNTTPLKR------SPLLNEILTKLSCMVDVGLHHLSLSRPVPTLSGGEIQRLFLASYI 343 Query: 502 GAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIG 561 A + +++V DEP+IGLH+ + E+L+ + +L + GNTVI VEHDE+ +R AD++ID+G Sbjct: 344 IAEMDSIIFVFDEPTIGLHEVEKEKLISIIRNLVNRGNTVIAVEHDENFMRCADYIIDLG 403 Query: 562 PGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEVPKKRVPANPEKVLKLTGARGN 621 P AG++GGE + +G E + S T Y+ + + N +K+LK+ A + Sbjct: 404 PFAGINGGERIFQGSFEEFLQCKHSNTAPYLKNNDILNMKSTYRTVNSDKILKVENANIH 463 Query: 622 NLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAE--------PAPY 673 NLK+VT+ +P+GL + GVSGSGKS+LI+DTL P + LN + + P Sbjct: 464 NLKNVTVDIPLGLMVGVAGVSGSGKSSLISDTLVPKLKILLNNKFVGDQNEDNEGIPEDN 523 Query: 674 RDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESRARGYTPGRFSF 733 I G E K + IDQ PIGR+ S PATYTGVF +R LFA + G + G F+ Sbjct: 524 SVISGWERIKKCLVIDQKPIGRSRTSCPATYTGVFDRIRALFA-----KESGSSAGLFTV 578 Query: 734 NVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKYKGKTIHEVLDMTI 793 N GG C+ C+GDG + + F I C+ C G + E LE+ GK I EVL T+ Sbjct: 579 NSEGG-CKVCKGDGEVHYHVGFGNFIDTECEACSGTGFIPEALEVTLNGKNIKEVLSFTV 637 Query: 794 EEAREFF-DAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQT 852 +EA FF + + L TL VG+ YI LGQ T+SGGE+QR+KLA+ELSK + Sbjct: 638 DEAVLFFKGRDKQIDKILATLQRVGMGYITLGQKTPTISGGESQRIKLAKELSKGQAAKD 697 Query: 853 -LYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADWIVDLGPEGGSG 911 +YILDEPTTGL F D +L+ ++ +L +GNT++V EH+ ++ D+I ++GP GGS Sbjct: 698 AVYILDEPTTGLSFHDSVRLMKLMEELVTKGNTVIVTEHDPYILSNCDYIFEMGPGGGSD 757 Query: 912 GGEILVSGTPETVAECEASHTARFLK 937 GG+++ +G+P + + S R+LK Sbjct: 758 GGKLIAAGSPVDLKNNQNSIIGRYLK 783 Score = 157 bits (396), Expect = 2e-36, Method: Composition-based stats. Identities = 62/134 (46%), Positives = 84/134 (62%), Gaps = 5/134 (3%) Query: 2 DKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYA 61 D IE++ AR HNLK I++ IP++KL V+TG+SGSGKSSLAFDTLY EG+RRY+ ++ Sbjct: 3 DFIEIKNARIHNLKGIDVKIPKNKLTVITGVSGSGKSSLAFDTLYEEGKRRYL----MFS 58 Query: 62 RQFLSLMEKPDVDHIEGLSPAISIEQKSTSH-NPRSTVGTITEIHDYLRLLFARVGEPRC 120 + P D I GLSP +++EQ+ NPRSTVGT T+I + L +LFA G Sbjct: 59 GTQFMIDSTPTFDSISGLSPTVAVEQRIIRQSNPRSTVGTRTKIGNILAMLFAAYGTRDS 118 Query: 121 PDHDVPLAAQTVSQ 134 D + + Q Sbjct: 119 KYDDGLPLSMEMFQ 132 Score = 88.9 bits (219), Expect = 9e-16, Method: Composition-based stats. Identities = 56/261 (21%), Positives = 88/261 (33%), Gaps = 30/261 (11%) Query: 2 DKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYA 61 ++V A HNLKN+ + IP ++ V G+SGSGKSSL DTL + + Sbjct: 453 KILKVENANIHNLKNVTVDIPLGLMVGVAGVSGSGKSSLISDTLVPKLKILLNNKF--VG 510 Query: 62 RQFLSLMEKPDVDHI----EGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARV-- 115 Q P+ + + E + + I+QK + S T T + D +R LFA+ Sbjct: 511 DQNEDNEGIPEDNSVISGWERIKKCLVIDQKPIGRSRTSCPATYTGVFDRIRALFAKESG 570 Query: 116 ------------GEPRCPDHDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHT 163 G C +D G + A + Sbjct: 571 SSAGLFTVNSEGGCKVCKGDGEVHYHVGFGNFIDTECEACSGTGFIPEALEVTLNGKNIK 630 Query: 164 KTLENLASQGYIRARIDGEVCDLSDPPK-LELQKKHTIEVVVDRFKVRDDLTQRLAESFE 222 + L + G + L+ I + + +QR+ Sbjct: 631 EVLSFTVDE--AVLFFKGRDKQIDKILATLQRVGMGYITLGQKTPTISGGESQRIK---- 684 Query: 223 TALELSGGTA---VVADMDDP 240 A ELS G A V +D+P Sbjct: 685 LAKELSKGQAAKDAVYILDEP 705 Score = 85.8 bits (211), Expect = 7e-15, Method: Composition-based stats. Identities = 52/196 (26%), Positives = 79/196 (40%), Gaps = 22/196 (11%) Query: 609 PEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIA 668 +++ AR +NLK + + +P T ITGVSGSGKS+L DTL+ +R+ + Sbjct: 1 MNDFIEIKNARIHNLKGIDVKIPKNKLTVITGVSGSGKSSLAFDTLYEEGKRRY----LM 56 Query: 669 EPAPYRDIQGLEHFDKV------IDIDQSPIG-RTPRSNPATYTGVFTPVRELFAGVPES 721 I FD + + ++Q I PRS T T + + LFA Sbjct: 57 FSGTQFMIDSTPTFDSISGLSPTVAVEQRIIRQSNPRSTVGTRTKIGNILAMLFAAYGTR 116 Query: 722 RARG-----YTPGRFSFNVRGGRCEACQGDGVIK--VEMHFLPDIYVP-CDQCKGKRYN- 772 ++ + F N G C C G G +K E D+ + D C G Sbjct: 117 DSKYDDGLPLSMEMFQKNSPKGMCVKCLGSGTVKKVDEDKLFGDLSLKVEDVCLGLGKRG 176 Query: 773 --RETLEIKYKGKTIH 786 ++ L+ YK I Sbjct: 177 STKKMLDSFYKYHNIS 192 >UniRef50_B4CXL9 ABC transporter-related protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CXL9_9BACT Length = 755 Score = 542 bits (1397), Expect = e-152, Method: Composition-based stats. Identities = 223/711 (31%), Positives = 350/711 (49%), Gaps = 62/711 (8%) Query: 231 TAVVADMDDPKAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFD 290 + + + L A A P+ L+ FSFN+P GACP C GLG D Sbjct: 100 RSTIGTSTEAYTFLRLLFARAAVPV-------LDASAFSFNSPEGACPACRGLGQILTPD 152 Query: 291 PDRVIQNPELSLAGGAIR--GWDRRNFYYFQMLKSLADHYKFDVEAPWGSLSANVHKVVL 348 P+R+ + SL GAIR W Y+ + F+++AP G ++ Sbjct: 153 PERLF-DLSKSLGEGAIRHRAWKVGGRYWN----IIKATEFFEMDAPLGQWPKEKLDHLM 207 Query: 349 YGSGKENIEFKYMNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCAS 408 + + E +R ++R FEGV+ + R + + A+F + + CA+ Sbjct: 208 HAAPAEVA------NRVPGFVQRFTFEGVVERLRERLADDRGLDSADYDAQFFTTQWCAT 261 Query: 409 CEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDRLK 468 C GTRL++ A + + + +++ F +L+++ ++ + L+ Sbjct: 262 CGGTRLQQRALACRLNGLNIADAAGLAVPELKNFVRSLEMS-----TLATVVDSLSRILE 316 Query: 469 FLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLL 528 L V L+YLTL R T+SGGE QRI++A ++G+ L+G++Y+LDEPS GLH ++ E + Sbjct: 317 NLEMVELSYLTLDRPITTVSGGEMQRIKIARELGSRLMGILYILDEPSRGLHAKNVEAVN 376 Query: 529 GTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLT 588 + L++ GNT++ VEH+ + AD+++++GPGAG GG++ G T Sbjct: 377 SIITKLKERGNTILSVEHNRAVVELADNIVELGPGAGSRGGQITETGTPAD-FKNSSGPT 435 Query: 589 GQYMSGKRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKST 648 G+ +S ++ P + + R NNLK L +P TC+ GVSG+GKS+ Sbjct: 436 GRLLSAAKQHISPPPPK--AFTEWHFFSDLRRNNLKIEKLKIPRAALTCLVGVSGAGKSS 493 Query: 649 LINDTLFPIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVF 708 L+ + + + Q IG + RSN TY F Sbjct: 494 LLEEMQLRDPAS-------------------------VRVAQRQIGASVRSNVCTYLNFF 528 Query: 709 TPVRELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKG 768 +R LFA + + F+FN G C C G G I +++HFL PC C G Sbjct: 529 DEIRNLFAKKANA-----SASLFAFNS-DGACPECGGRGSITLDLHFLGSAMAPCRTCNG 582 Query: 769 KRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSAT 828 KRY E L ++ + I EVL++ +EEA FF + L+ L+ GL YIRLGQS Sbjct: 583 KRYRAEVLGYTWQDRNISEVLELPVEEAATFFREGKKIRSALELLLGCGLGYIRLGQSLD 642 Query: 829 TLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVI 888 T SGGE QRVKL L+ LY+LDEP+ GLH DI++++ +L L +G T+V Sbjct: 643 TFSGGELQRVKLIYGLNDPTA---LYLLDEPSRGLHPDDIERIVSLLRTLTARGKTVVAS 699 Query: 889 EHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLKPM 939 EH+LD++ ADW+V+LGP + GG+++ +GT + S TA++LK Sbjct: 700 EHSLDLVARADWVVELGPGAANAGGKVIAAGTVREIIRATTSITAQYLKSY 750 Score = 159 bits (402), Expect = 5e-37, Method: Composition-based stats. Identities = 63/161 (39%), Positives = 85/161 (52%), Gaps = 16/161 (9%) Query: 2 DKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYA 61 D++ V G R HNLK++++ IP + V TG+SG GKSSL FD +YA + ++SLS YA Sbjct: 7 DQLSVTGVRLHNLKSVSVSIPHFRHTVCTGVSGCGKSSLVFDCIYALCEYELLQSLSTYA 66 Query: 62 RQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPR-- 119 R + L PDV+H GL P + I+Q NPRST+GT TE + +LRLLFAR P Sbjct: 67 RGAIPLPVVPDVEHASGLLPPVVIDQADLGRNPRSTIGTSTEAYTFLRLLFARAAVPVLD 126 Query: 120 ------------CPDHD--VPLAAQTVSQMVDNVLSQPEGK 146 CP + ++ D S EG Sbjct: 127 ASAFSFNSPEGACPACRGLGQILTPDPERLFDLSKSLGEGA 167 Score = 95.8 bits (237), Expect = 6e-18, Method: Composition-based stats. Identities = 47/153 (30%), Positives = 72/153 (47%), Gaps = 9/153 (5%) Query: 605 VPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNG 664 + L +TG R +NLK V++++P T TGVSG GKS+L+ D ++ + + +L Sbjct: 1 MRPPSTDQLSVTGVRLHNLKSVSVSIPHFRHTVCTGVSGCGKSSLVFDCIYALCEYELLQ 60 Query: 665 ATIAEPAPYRDIQGLEHFDKV------IDIDQSPIGRTPRSNPATYTGVFTPVRELFAGV 718 + + + + + IDQ+ +GR PRS T T +T +R LFA Sbjct: 61 SLSTYARGAIPLPVVPDVEHASGLLPPVVIDQADLGRNPRSTIGTSTEAYTFLRLLFAR- 119 Query: 719 PESRARGYTPGRFSFNVRGGRCEACQGDGVIKV 751 + FSFN G C AC+G G I Sbjct: 120 --AAVPVLDASAFSFNSPEGACPACRGLGQILT 150 Score = 64.6 bits (156), Expect = 2e-08, Method: Composition-based stats. Identities = 32/148 (21%), Positives = 50/148 (33%), Gaps = 42/148 (28%) Query: 8 GARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQFLSL 67 R +NLK L IPR L + G+SG+GKSSL L Sbjct: 462 DLRRNNLKIEKLKIPRAALTCLVGVSGAGKSSL------------------------LEE 497 Query: 68 MEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPR-------- 119 M+ D ++ + Q+ + RS V T D +R LFA+ Sbjct: 498 MQLRD-------PASVRVAQRQIGASVRSNVCTYLNFFDEIRNLFAKKANASASLFAFNS 550 Query: 120 ---CPDHDVPLAAQTVSQMVDNVLSQPE 144 CP+ + + + ++ Sbjct: 551 DGACPECGGRGSITLDLHFLGSAMAPCR 578 >UniRef50_C8NMU6 Excinuclease ABC, A subunit n=91 Tax=Bacteria RepID=C8NMU6_COREF Length = 779 Score = 541 bits (1394), Expect = e-152, Method: Composition-based stats. Identities = 254/871 (29%), Positives = 400/871 (45%), Gaps = 128/871 (14%) Query: 101 ITEIHDYLRLLFARVGEPRCPDHDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKG 160 + + HD +R+ A + +P TV V GK ++ I E + Sbjct: 3 MADSHDMIRVHGAHENNLKNISLAIPKRRVTVFTGVS-----GSGKSSLVFGTIAAESQR 57 Query: 161 EHTKTLENLASQGYIRARIDGEVCDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAES 220 +T QG++ P ++L + T +VV + + + Sbjct: 58 LINETYSAFV-QGFMPVAAR---------PDVDLLEGLTTAIVVGQESMGANPRS----- 102 Query: 221 FETALELSGGTAVVADMDDPKAEELLFSANFACPICGYSMRELEPRLFSFNNPA------ 274 V D A + + A P G P +SFN P+ Sbjct: 103 ------------TVGTATDATAMLRILFSRLAEPAAG------GPGAYSFNVPSISASGG 144 Query: 275 -----------------GACPTCDGLGVQQYFDPDRVIQNPELSLAGGAIRGWDRRNFYY 317 G CP C+G+G D +++ + LSL GA+ + Sbjct: 145 VSRAGGKREKVEFTRTGGMCPRCEGMGRVSEIDRAQLV-DESLSLNDGALLIPGYKVG-- 201 Query: 318 FQMLKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKENIEFKYMNDRGDTSIRRHPFEGV 377 ++ A+ + + P + LY I+F + +EG+ Sbjct: 202 SWSMRGYAESGLYPADIPVAEFTDEQRHA-LYHQEPMKIKF---------NGINVTYEGL 251 Query: 378 LHNMERRYKETESSAVREELAKFISNRP----CASCEGTRLRREARHVYVENTPLPAISD 433 + + + + S +++ + +F+ C C GTRL R A + + + Sbjct: 252 IPKITKSMLSKDRSGMQKHIGEFVDRAVTFIACPDCGGTRLARHALESRINGKNIADLCS 311 Query: 434 MSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQ 493 M + + + + A+ +++ + L+ V +GL YL L R TLSGGEAQ Sbjct: 312 MEVRDLARWIDGV-----DARSVAPLMRGLSQTLENFVAIGLGYLQLDRPVATLSGGEAQ 366 Query: 494 RIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRA 553 R R+ +G+ L V YV DEP+ GLH D ERL L+ LRD GNTV+VVEH + I Sbjct: 367 RTRMVRHLGSPLTDVTYVFDEPTAGLHAHDIERLNRLLLDLRDKGNTVLVVEHKPETIAI 426 Query: 554 ADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEVPKKRVPANPEKVL 613 ADHV+D+GPGAG GGE+ EG + + +++TG++ + +++ + + L Sbjct: 427 ADHVVDLGPGAGGAGGEIQFEGTVAE-LEASDTVTGRHFHDRAELKTSAR----SAAGHL 481 Query: 614 KLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAEPAPY 673 + GA NNL+DV + +P+G+ T I+GV+GSGKS+L++ Sbjct: 482 PIRGANRNNLRDVDVDIPLGVLTVISGVAGSGKSSLVHAI-------------------- 521 Query: 674 RDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESRARGYTPGRFSF 733 + ++ +DQ+ I + RSNPATYTG+ +R+ FA + G P FS Sbjct: 522 ------PRDESLVSVDQTSIQGSTRSNPATYTGMLDSIRKAFA-----KVNGVKPALFSA 570 Query: 734 NVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKYKGKTIHEVLDMTI 793 N GG C C G GV+ V++ + + PC+ C+G+R++ L+ G+ I EVL M Sbjct: 571 NS-GGACPNCHGTGVVTVDLGMVAGVSSPCEVCEGRRFDEAVLDHHLGGRNIAEVLAMPA 629 Query: 794 EEAREFF----DAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGT 849 EA EFF +PA L+ L+ VGL Y+ LGQ +TLSGGE QR+KL L+ + T Sbjct: 630 VEALEFFSAPESKMPAAVTILRRLVAVGLGYLTLGQPLSTLSGGERQRLKLGTHLADKAT 689 Query: 850 GQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADWIVDLGPEGG 909 +ILDEPTTGLH AD++ LL + L D G T++V+EH+L V+ AD I+++GP G Sbjct: 690 T---FILDEPTTGLHLADVRTLLSLFDSLVDAGKTVIVVEHHLAVLAHADHIIEVGPGAG 746 Query: 910 SGGGEILVSGTPETVAECEASHTARFLKPML 940 S GG+I+ GTP + + T +LK L Sbjct: 747 SDGGQIVFEGTPAELTGS-GTLTGGYLKNYL 776 Score = 162 bits (410), Expect = 6e-38, Method: Composition-based stats. Identities = 61/117 (52%), Positives = 82/117 (70%) Query: 2 DKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYA 61 D I V GA +NLKNI+L IP+ ++ V TG+SGSGKSSL F T+ AE QR E+ SA+ Sbjct: 8 DMIRVHGAHENNLKNISLAIPKRRVTVFTGVSGSGKSSLVFGTIAAESQRLINETYSAFV 67 Query: 62 RQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEP 118 + F+ + +PDVD +EGL+ AI + Q+S NPRSTVGT T+ LR+LF+R+ EP Sbjct: 68 QGFMPVAARPDVDLLEGLTTAIVVGQESMGANPRSTVGTATDATAMLRILFSRLAEP 124 Score = 81.2 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 38/160 (23%), Positives = 60/160 (37%), Gaps = 46/160 (28%) Query: 3 KIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYAR 62 + +RGA +NL+++++ IP L V++G++GSGKSSL E Sbjct: 480 HLPIRGANRNNLRDVDVDIPLGVLTVISGVAGSGKSSLVHAIPRDESL------------ 527 Query: 63 QFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPR--- 119 +S++Q S + RS T T + D +R FA+V + Sbjct: 528 --------------------VSVDQTSIQGSTRSNPATYTGMLDSIRKAFAKVNGVKPAL 567 Query: 120 --------CPDHDVPLAAQTVSQMVDNV---LSQPEGKRL 148 CP+ MV V EG+R Sbjct: 568 FSANSGGACPNCHGTGVVTVDLGMVAGVSSPCEVCEGRRF 607 >UniRef50_Q7UK42 Excinuclease ABC subunit A n=1 Tax=Rhodopirellula baltica RepID=Q7UK42_RHOBA Length = 839 Score = 541 bits (1393), Expect = e-152, Method: Composition-based stats. Identities = 272/536 (50%), Positives = 375/536 (69%), Gaps = 3/536 (0%) Query: 404 RPCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNL--KLAGQRAKIAEKILK 461 C++CEG RL+ E+ V + + + A+ M + A + N+ L + K+A I Sbjct: 303 VTCSTCEGGRLKAESLAVTIHDVSIDAMCRMPLPDAQSWMENVAKPLDALQQKVAAPIQS 362 Query: 462 EIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQ 521 E+ R+ FL VG++YLTL RSAETLSGGE QR+RLA+ IG+GLVGV YVLDEPSIGLH Sbjct: 363 EVVRRIDFLRRVGVDYLTLDRSAETLSGGEMQRVRLATSIGSGLVGVCYVLDEPSIGLHP 422 Query: 522 RDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIM 581 D+ RLL + L+ GNT+++VEHDED I+AADHVIDIGPGAG HGG +V++G + Sbjct: 423 ADHHRLLAAIKELQTAGNTIVIVEHDEDTIQAADHVIDIGPGAGRHGGRLVSQGTAAEVA 482 Query: 582 AVPESLTGQYMSGKRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGV 641 S TG Y+SG+ KI + + R L LTGA NNL++VT +P+G ++GV Sbjct: 483 DDESSPTGAYLSGRSKIGLDRPRRTPRKSHQLTLTGATLNNLQNVTAKIPLGCLVGVSGV 542 Query: 642 SGSGKSTLINDTLFPIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNP 701 SGSGKS+LI DTL+P +L +P P++ + G +H DK++ IDQ+PIGRT RS P Sbjct: 543 SGSGKSSLIVDTLYPALAAKL-ELVADQPGPHKRLTGAQHIDKLVPIDQTPIGRTTRSCP 601 Query: 702 ATYTGVFTPVRELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYV 761 ATY GV P+R+++A E++ G+ RFSFN GRC+ C+G+G ++EM+FL D+ + Sbjct: 602 ATYAGVMDPIRQVYASTREAKTLGFAANRFSFNSPAGRCDVCKGNGFERIEMNFLSDLLI 661 Query: 762 PCDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYI 821 C +C GKR+NR+TL++++KG TI +VL MTI+ A+EFF+ VP + L +L+DVGL Y+ Sbjct: 662 ECSRCGGKRFNRQTLQVRFKGATIADVLGMTIDAAQEFFENVPKVHHLLASLVDVGLGYV 721 Query: 822 RLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQ 881 LGQS+TTLSGGEAQR+KLA EL++ TG+T Y+LDEPTTGLHFAD+Q+LL VL +L + Sbjct: 722 TLGQSSTTLSGGEAQRIKLATELARPATGKTFYVLDEPTTGLHFADVQRLLVVLDRLVEA 781 Query: 882 GNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLK 937 GNT++VIEH D++ DW++DLGP GGS GG ++ G PET+A C S T +FL+ Sbjct: 782 GNTVLVIEHQSDLLAACDWLLDLGPGGGSQGGHLIAEGPPETIAACPKSATGKFLR 837 Score = 333 bits (853), Expect = 2e-89, Method: Composition-based stats. Identities = 149/288 (51%), Positives = 201/288 (69%), Gaps = 1/288 (0%) Query: 2 DKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYA 61 + I +RGAR HNL+N+++ IPRD + V++G+SGSGKSSLAFDTL+AEGQR+Y++SLS YA Sbjct: 8 NLIRIRGARVHNLRNLDVDIPRDAITVISGVSGSGKSSLAFDTLFAEGQRQYIDSLSTYA 67 Query: 62 RQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCP 121 RQ+L + +PDVD I+GL+P +SI+QKS SH+ RSTV TITEI+DYLRLL+ARVG P C Sbjct: 68 RQYLDAIPRPDVDWIDGLAPTLSIDQKSGSHSARSTVATITEIYDYLRLLYARVGVPHCV 127 Query: 122 DHDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARIDG 181 ++ QT ++V + + P+ +L L++P+++ RKG H LE +A G +RAR+DG Sbjct: 128 ACGSTISTQTPDRIVATLATLPDRTKLTLMSPMVRGRKGAHADVLEQIAGHGLVRARVDG 187 Query: 182 EVCDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAV-VADMDDP 240 E+ L D P L ++K HTIE +VDR ++D + RL ES AL L+GG + D D Sbjct: 188 EMYLLEDVPPLAVRKNHTIEAIVDRLIIKDGVDARLDESTRLALRLAGGMCSALIDRGDG 247 Query: 241 KAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQY 288 + E LFS + C CG S ELEPR FSFN+P GACP C GLG Sbjct: 248 EPETKLFSTSMTCLECGESFEELEPRTFSFNSPYGACPACQGLGKVAV 295 Score = 184 bits (467), Expect = 2e-44, Method: Composition-based stats. Identities = 85/245 (34%), Positives = 124/245 (50%), Gaps = 24/245 (9%) Query: 713 ELFAGVPESRARG-----YTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCK 767 +LF+ G P FSFN G C ACQG G + V V C C+ Sbjct: 252 KLFSTSMTCLECGESFEELEPRTFSFNSPYGACPACQGLGKVAVRGD--KSHMVTCSTCE 309 Query: 768 GKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAVP----------------ALARKLQ 811 G R E+L + +I + M + +A+ + + V + R++ Sbjct: 310 GGRLKAESLAVTIHDVSIDAMCRMPLPDAQSWMENVAKPLDALQQKVAAPIQSEVVRRID 369 Query: 812 TLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQL 871 L VG+ Y+ L +SA TLSGGE QRV+LA + G Y+LDEP+ GLH AD +L Sbjct: 370 FLRRVGVDYLTLDRSAETLSGGEMQRVRLATSIGSGLVG-VCYVLDEPSIGLHPADHHRL 428 Query: 872 LDVLHKLRDQGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEASH 931 L + +L+ GNTIV++EH+ D I+ AD ++D+GP G GG ++ GT VA+ E+S Sbjct: 429 LAAIKELQTAGNTIVIVEHDEDTIQAADHVIDIGPGAGRHGGRLVSQGTAAEVADDESSP 488 Query: 932 TARFL 936 T +L Sbjct: 489 TGAYL 493 Score = 160 bits (405), Expect = 2e-37, Method: Composition-based stats. Identities = 90/271 (33%), Positives = 133/271 (49%), Gaps = 42/271 (15%) Query: 353 KENIEFKYMNDRGDTSIRRHPFEGVLHNMERRYKET---------------ESSAVREEL 397 + + T + GV+ + + Y T S A R ++ Sbjct: 583 DKLVPIDQTPIGRTTRSCPATYAGVMDPIRQVYASTREAKTLGFAANRFSFNSPAGRCDV 642 Query: 398 AK----------FISN--RPCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNN 445 K F+S+ C+ C G R R+ V + + + M+I A EFF N Sbjct: 643 CKGNGFERIEMNFLSDLLIECSRCGGKRFNRQTLQVRFKGATIADVLGMTIDAAQEFFEN 702 Query: 446 LKLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGL 505 + ++ L LV+VGL Y+TL +S+ TLSGGEAQRI+LA+++ Sbjct: 703 VP--------------KVHHLLASLVDVGLGYVTLGQSSTTLSGGEAQRIKLATELARPA 748 Query: 506 VGVM-YVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGA 564 G YVLDEP+ GLH D +RLL L L + GNTV+V+EH D + A D ++D+GPG Sbjct: 749 TGKTFYVLDEPTTGLHFADVQRLLVVLDRLVEAGNTVLVIEHQSDLLAACDWLLDLGPGG 808 Query: 565 GVHGGEVVAEGPLEAIMAVPESLTGQYMSGK 595 G GG ++AEGP E I A P+S TG+++ + Sbjct: 809 GSQGGHLIAEGPPETIAACPKSATGKFLRLR 839 Score = 54.2 bits (129), Expect = 3e-05, Method: Composition-based stats. Identities = 39/119 (32%), Positives = 61/119 (51%), Gaps = 6/119 (5%) Query: 607 ANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGAT 666 + + ++++ GAR +NL+++ + +P T I+GVSGSGKS+L DTLF QRQ + Sbjct: 4 PSTDNLIRIRGARVHNLRNLDVDIPRDAITVISGVSGSGKSSLAFDTLFAEGQRQYIDSL 63 Query: 667 IAEPAPYRDIQGLEHFDKV------IDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVP 719 Y D D + + IDQ + RS AT T ++ +R L+A V Sbjct: 64 STYARQYLDAIPRPDVDWIDGLAPTLSIDQKSGSHSARSTVATITEIYDYLRLLYARVG 122 Score = 45.0 bits (105), Expect = 0.016, Method: Composition-based stats. Identities = 37/119 (31%), Positives = 59/119 (49%), Gaps = 9/119 (7%) Query: 2 DKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLY-AEGQRRYVESLSAY 60 ++ + GA +NL+N+ IP L+ V+G+SGSGKSSL DTLY A + + + Sbjct: 512 HQLTLTGATLNNLQNVTAKIPLGCLVGVSGVSGSGKSSLIVDTLYPALAAKLELVADQPG 571 Query: 61 ARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPR 119 + L+ + HI+ L P I+Q RS T + D +R ++A E + Sbjct: 572 PHKRLTGAQ-----HIDKLVP---IDQTPIGRTTRSCPATYAGVMDPIRQVYASTREAK 622 >UniRef50_C7FPB9 Excinuclease ATPase subunit n=1 Tax=uncultured bacterium HF186_75m_14K15 RepID=C7FPB9_9BACT Length = 798 Score = 534 bits (1377), Expect = e-150, Method: Composition-based stats. Identities = 263/584 (45%), Positives = 361/584 (61%), Gaps = 12/584 (2%) Query: 357 EFKYMNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGTRLRR 416 +F T++ P G +E ++ E PC +C+G RL Sbjct: 224 QFDPRAFSPHTTLGACPTCGGAGVLEEALLASDKGKDTE-----RRYVPCPACDGERLGP 278 Query: 417 EARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNVGLN 476 R V LP M+ +E + L+L + A +AE + I +R +FLV+VGL+ Sbjct: 279 LGRRVRFGGRRLPEYLKMTPPELIEALSGLELDARGALVAEGPVTAIIERARFLVDVGLD 338 Query: 477 YLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRD 536 YL+L RS +LSGGEAQRIRLA+Q+GA L GV+YVLDEP+IGLH D E LL L L+ Sbjct: 339 YLSLDRSVRSLSGGEAQRIRLAAQLGAHLSGVLYVLDEPTIGLHPTDTEVLLKALDRLQG 398 Query: 537 LGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKR 596 GN V++VEHDE +R AD ++DIGPGAG GGE++ PL+ + P SLTG + +R Sbjct: 399 RGNGVLMVEHDEATLRTADVLVDIGPGAGSEGGELLVAAPLDEALRHPRSLTGACLRRER 458 Query: 597 KIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFP 656 V + P + ++LTG NL V LTLP G + +TGVSGSGKS+L++D L Sbjct: 459 P-PVAEAPRPLDDVTFIRLTGVTHRNLSGVDLTLPRGRLSVVTGVSGSGKSSLVHDVLAK 517 Query: 657 IAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFA 716 + + +GL+ +VI +D PIG+ PRS PATY GV+ +R+LFA Sbjct: 518 AIEPHRG------AGSWEHAEGLDGLTRVIRVDDKPIGKNPRSIPATYIGVWDAIRKLFA 571 Query: 717 GVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETL 776 +P +R RG++P RFSFNV+GGRCEAC G G +K+EM FLPD Y PCD C GKR+N +TL Sbjct: 572 RLPNARLRGFSPSRFSFNVKGGRCEACAGQGQVKLEMSFLPDAYSPCDTCGGKRFNTQTL 631 Query: 777 EIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQ 836 ++ Y G +IH+VL+M + +A F+ VP + R L+ L DVGL Y++LGQ +TTLSGGEAQ Sbjct: 632 QVTYDGHSIHDVLEMPVRDALALFERVPKIQRALKLLEDVGLGYLKLGQPSTTLSGGEAQ 691 Query: 837 RVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIK 896 R+KL L R TL +LDEP+ GLH AD+ +LL V+H+L D G T+VVIEHN+DV++ Sbjct: 692 RIKLVSHLIGRKRPDTLIVLDEPSIGLHMADVPKLLAVVHRLVDAGTTVVVIEHNVDVVR 751 Query: 897 TADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLKPML 940 ADW++DLGP GG GG ++ G E +A+ S T ++L + Sbjct: 752 EADWVIDLGPGGGPEGGRVMYQGPFEGLADAPDSRTGQWLSRAM 795 Score = 212 bits (541), Expect = 4e-53, Method: Composition-based stats. Identities = 84/269 (31%), Positives = 133/269 (49%), Gaps = 10/269 (3%) Query: 32 LSGSGKSSLAFDTLYAEGQRRYVESLSAYARQFLSLMEKPDVDHIEGLSPAISIEQKSTS 91 +SGSGKS+LAFD ++AEGQRR+++ +S YARQ+++ + +PD I G+ P ++IEQ++T Sbjct: 1 MSGSGKSTLAFDIVFAEGQRRFLDCVSPYARQYITQLGRPDAARIAGIPPTVAIEQRTTR 60 Query: 92 HNPRSTVGTITEIHDYLRLLFARVGEPRCPDHDVPLAAQTVSQMVDNVLSQPEGKRLMLL 151 RS V TEI +LRLLFAR+G D ++ ++ + + L + Sbjct: 61 GGARSVVANATEISAFLRLLFARLGV----DQLAASRRRSPEELALYLEEAYPERELAIC 116 Query: 152 APIIKERKGEHTKTLENLASQGYIRARIDGEVCDLSDPPKLELQKKHTIEVVVDRFKVRD 211 AP I RKG H A G+ +DG + + P+L + H+I+++ R Sbjct: 117 APAISARKGFHKPVFRRAAMMGHTEILVDGVIMPPAPTPRLRRSRLHSIDMIFGR--TMS 174 Query: 212 DLTQRLAESFETALELSGGTAVVADMDDPKAEELLFSANFACPICGYSMRELEPRLFSFN 271 D +R + E A + GG V + E+L ++ +PR FS + Sbjct: 175 DDRERAEDMIERASAMGGGRVRVL-LGQGSVPEVLGPFEVVPLESHVRRQQFDPRAFSPH 233 Query: 272 NPAGACPTCDGLGVQQYFDPDRVIQNPEL 300 GACPTC G GV + + + Sbjct: 234 TTLGACPTCGGAGVLEE---ALLASDKGK 259 Score = 168 bits (426), Expect = 9e-40, Method: Composition-based stats. Identities = 75/199 (37%), Positives = 105/199 (52%), Gaps = 15/199 (7%) Query: 402 SNRPCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILK 461 + PC +C G R + V + + + +M + A+ F + Sbjct: 614 AYSPCDTCGGKRFNTQTLQVTYDGHSIHDVLEMPVRDALALFERVP-------------- 659 Query: 462 EIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGV-MYVLDEPSIGLH 520 +I LK L +VGL YL L + + TLSGGEAQRI+L S + + VLDEPSIGLH Sbjct: 660 KIQRALKLLEDVGLGYLKLGQPSTTLSGGEAQRIKLVSHLIGRKRPDTLIVLDEPSIGLH 719 Query: 521 QRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAI 580 D +LL + L D G TV+V+EH+ D +R AD VID+GPG G GG V+ +GP E + Sbjct: 720 MADVPKLLAVVHRLVDAGTTVVVIEHNVDVVREADWVIDLGPGGGPEGGRVMYQGPFEGL 779 Query: 581 MAVPESLTGQYMSGKRKIE 599 P+S TGQ++S Sbjct: 780 ADAPDSRTGQWLSRAMAPA 798 Score = 160 bits (406), Expect = 2e-37, Method: Composition-based stats. Identities = 90/266 (33%), Positives = 130/266 (48%), Gaps = 26/266 (9%) Query: 697 PRSNPATYTGVFTPVRELFAGVP---ESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEM 753 R G V F VP R + + P FS + G C C G GV++ E Sbjct: 193 GRVRVLLGQGSVPEVLGPFEVVPLESHVRRQQFDPRAFSPHTTLGACPTCGGAGVLE-EA 251 Query: 754 HFLPD-------IYVPCDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAVPAL 806 D YVPC C G+R +++ G+ + E L MT E E + Sbjct: 252 LLASDKGKDTERRYVPCPACDGERLGPLGRRVRFGGRRLPEYLKMTPPELIEALSGLELD 311 Query: 807 AR--------------KLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQT 852 AR + + L+DVGL Y+ L +S +LSGGEAQR++LA +L +G Sbjct: 312 ARGALVAEGPVTAIIERARFLVDVGLDYLSLDRSVRSLSGGEAQRIRLAAQLGAHLSG-V 370 Query: 853 LYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADWIVDLGPEGGSGG 912 LY+LDEPT GLH D + LL L +L+ +GN ++++EH+ ++TAD +VD+GP GS G Sbjct: 371 LYVLDEPTIGLHPTDTEVLLKALDRLQGRGNGVLMVEHDEATLRTADVLVDIGPGAGSEG 430 Query: 913 GEILVSGTPETVAECEASHTARFLKP 938 GE+LV+ + S T L+ Sbjct: 431 GELLVAAPLDEALRHPRSLTGACLRR 456 Score = 87.0 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 38/120 (31%), Positives = 53/120 (44%), Gaps = 12/120 (10%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 63 I + G NL ++L +PR +L VVTG+SGSGKSSL D L Sbjct: 474 IRLTGVTHRNLSGVDLTLPRGRLSVVTGVSGSGKSSLVHDVLAK------------AIEP 521 Query: 64 FLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCPDH 123 + ++GL+ I ++ K NPRS T + D +R LFAR+ R Sbjct: 522 HRGAGSWEHAEGLDGLTRVIRVDDKPIGKNPRSIPATYIGVWDAIRKLFARLPNARLRGF 581 >UniRef50_B2UL01 Excinuclease ABC, A subunit n=1 Tax=Akkermansia muciniphila ATCC BAA-835 RepID=B2UL01_AKKM8 Length = 833 Score = 529 bits (1363), Expect = e-148, Method: Composition-based stats. Identities = 256/548 (46%), Positives = 360/548 (65%), Gaps = 17/548 (3%) Query: 402 SNRPCASCEGTRLRREARHVYV----ENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAE 457 N PC +C G RL A V + L ++ + + LK A Sbjct: 291 ENGPCRACGGQRLSPLALAVTMPAPDRAYNLAELTALPLEDMAGELERLKTPPSLAAALT 350 Query: 458 KILKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSI 517 +++EI R++FL +GL+YL+L R A TLSGGE QR RLASQ+G GL GV+Y+LDEP+ Sbjct: 351 PLMEEINKRVRFLNELGLSYLSLDRQANTLSGGELQRARLASQLGGGLSGVLYILDEPTA 410 Query: 518 GLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPL 577 GLH D +RLL L LR+ GNTV+VVEHDE + AADH++D+GPG+G +GG ++A+G L Sbjct: 411 GLHPADTDRLLRALRTLRNQGNTVLVVEHDEQILTAADHLVDMGPGSGTNGGRILAQGSL 470 Query: 578 EAIMAVPESLTGQYMSGKRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTC 637 I+ S TG+++SGKR + ++ V LTGA +NL +VTL +PVG TC Sbjct: 471 AEILGNSGSPTGEWLSGKRNMPASGRKTAPAGRLV--LTGADKHNLNNVTLNIPVGTLTC 528 Query: 638 ITGVSGSGKSTLINDTLFPIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTP 697 I+G SGSGKSTL+ D L P ++ L+G R +QG EHF++++ IDQSPIG+TP Sbjct: 529 ISGPSGSGKSTLVRDCLIPAVRQDLSGKKGIP----RRVQGTEHFNRLVVIDQSPIGKTP 584 Query: 698 RSNPATYTGVFTPVRELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLP 757 RS PAT TG+ +R L+A +P S+ RGYT RFS N+RGGRCE CQG G+I+V+M+FL Sbjct: 585 RSTPATATGLLQVLRPLYAQLPLSKQRGYTAARFSPNIRGGRCERCQGTGMIEVDMNFLG 644 Query: 758 DIYVPCDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVG 817 ++ +PCD C+G+ YNRETLE+ +KGK+I + L +T++EA EFF ++P A L+++ DVG Sbjct: 645 NVAMPCDACQGQCYNRETLEVTWKGKSIAQALALTVDEAAEFFSSLPRAAAILKSMQDVG 704 Query: 818 LTYIRLGQSATTLSGGEAQRVKLARELSKRGT-------GQTLYILDEPTTGLHFADIQQ 870 L Y+ L + A TLSGGE+QR+K+A EL+K + L+ILDEPT+GLHF ++ Sbjct: 705 LGYLNLNRRADTLSGGESQRIKIAAELAKAPAWKLEEDGKRALFILDEPTSGLHFNEVAL 764 Query: 871 LLDVLHKLRDQGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEAS 930 LL L +LRD G+TI+ +EH+ D++ AD++VD+GP G GG I+ G+P VA + Sbjct: 765 LLAALFRLRDAGHTILCVEHHKDLLNAADYLVDMGPGAGRHGGNIVAEGSPADVASNPEA 824 Query: 931 HTARFLKP 938 T+ +L P Sbjct: 825 PTSPWLVP 832 Score = 303 bits (776), Expect = 2e-80, Method: Composition-based stats. Identities = 121/324 (37%), Positives = 183/324 (56%), Gaps = 4/324 (1%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 63 I +RGAR HNL+N+NL +P +KLIV G SGSGKSSLAFDTL++E +RR+++ LSA +RQ Sbjct: 5 ISIRGARQHNLRNLNLDLPSNKLIVFCGPSGSGKSSLAFDTLFSESRRRFLDCLSARSRQ 64 Query: 64 FLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCPDH 123 + EKP+VD I GL PA+ +EQ + + R+ +G+ITEI DYLR+L+A G P P+ Sbjct: 65 GMDQPEKPEVDSITGLPPALCLEQSARQQSSRTLLGSITEILDYLRILYAAAGTPHDPET 124 Query: 124 DVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARIDGEV 183 L ++ ++ + ++S PE RL+L AP + TL + QG++R +GE+ Sbjct: 125 GKELERKSPDRITEELVSLPEHTRLILTAPAENLLAQDPAATLADFQRQGFLRVYWNGEM 184 Query: 184 CDLSDPPKLELQKKHTIEVVVDRFKVRDDL-TQRLAESFETALELSGGTAV-VADMDDPK 241 D+ + + +V+DR VR + R+A+S +TAL ++ + + + Sbjct: 185 RDIEEISS-PVPPPPDAALVIDRLIVRGENTASRIADSLQTALRINPDEVRAIITIPGEE 243 Query: 242 AEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGV-QQYFDPDRVIQNPEL 300 A F + P G+ + +L PR FSFN+P GACP+C G G+ +Q P R L Sbjct: 244 ASIRAFHTRYRNPETGFLLPQLTPRHFSFNSPLGACPSCRGTGLNEQENGPCRACGGQRL 303 Query: 301 SLAGGAIRGWDRRNFYYFQMLKSL 324 S A+ Y L +L Sbjct: 304 SPLALAVTMPAPDRAYNLAELTAL 327 Score = 173 bits (438), Expect = 3e-41, Method: Composition-based stats. Identities = 86/289 (29%), Positives = 133/289 (46%), Gaps = 32/289 (11%) Query: 672 PYRDIQGLEHFDKVIDIDQSPIGRTPR--SNPATYTGVFTPVRELFAGVPESRA----RG 725 ++G ++ D Q+ + P T G +R Sbjct: 205 DRLIVRGENTASRIADSLQTALRINPDEVRAIITIPGEEASIRAFHTRYRNPETGFLLPQ 264 Query: 726 YTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKYK---- 781 TP FSFN G C +C+G G+ + E PC C G+R + L + Sbjct: 265 LTPRHFSFNSPLGACPSCRGTGLNEQENG-------PCRACGGQRLSPLALAVTMPAPDR 317 Query: 782 GKTIHEVLDMTIEE--------------AREFFDAVPALARKLQTLMDVGLTYIRLGQSA 827 + E+ + +E+ A + + ++++ L ++GL+Y+ L + A Sbjct: 318 AYNLAELTALPLEDMAGELERLKTPPSLAAALTPLMEEINKRVRFLNELGLSYLSLDRQA 377 Query: 828 TTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVV 887 TLSGGE QR +LA +L +G LYILDEPT GLH AD +LL L LR+QGNT++V Sbjct: 378 NTLSGGELQRARLASQLGGGLSG-VLYILDEPTAGLHPADTDRLLRALRTLRNQGNTVLV 436 Query: 888 IEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFL 936 +EH+ ++ AD +VD+GP G+ GG IL G+ + S T +L Sbjct: 437 VEHDEQILTAADHLVDMGPGSGTNGGRILAQGSLAEILGNSGSPTGEWL 485 Score = 160 bits (406), Expect = 2e-37, Method: Composition-based stats. Identities = 71/200 (35%), Positives = 111/200 (55%), Gaps = 22/200 (11%) Query: 404 RPCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEI 463 PC +C+G RE V + + +++ A EFF++L A Sbjct: 648 MPCDACQGQCYNRETLEVTWKGKSIAQALALTVDEAAEFFSSLPRAA------------- 694 Query: 464 GDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGL--------VGVMYVLDEP 515 LK + +VGL YL L+R A+TLSGGE+QRI++A+++ +++LDEP Sbjct: 695 -AILKSMQDVGLGYLNLNRRADTLSGGESQRIKIAAELAKAPAWKLEEDGKRALFILDEP 753 Query: 516 SIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEG 575 + GLH + LL L LRD G+T++ VEH +D + AAD+++D+GPGAG HGG +VAEG Sbjct: 754 TSGLHFNEVALLLAALFRLRDAGHTILCVEHHKDLLNAADYLVDMGPGAGRHGGNIVAEG 813 Query: 576 PLEAIMAVPESLTGQYMSGK 595 + + PE+ T ++ + Sbjct: 814 SPADVASNPEAPTSPWLVPR 833 Score = 83.9 bits (206), Expect = 3e-14, Method: Composition-based stats. Identities = 38/115 (33%), Positives = 52/115 (45%), Gaps = 14/115 (12%) Query: 3 KIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYAR 62 ++ + GA HNL N+ L IP L ++G SGSGKS+L D L R Sbjct: 503 RLVLTGADKHNLNNVTLNIPVGTLTCISGPSGSGKSTLVRDCLI------------PAVR 550 Query: 63 QFL-SLMEKP-DVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARV 115 Q L P V E + + I+Q PRST T T + LR L+A++ Sbjct: 551 QDLSGKKGIPRRVQGTEHFNRLVVIDQSPIGKTPRSTPATATGLLQVLRPLYAQL 605 Score = 60.0 bits (144), Expect = 4e-07, Method: Composition-based stats. Identities = 31/112 (27%), Positives = 51/112 (45%), Gaps = 6/112 (5%) Query: 614 KLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAEPAPY 673 + GAR +NL+++ L LP G SGSGKS+L DTLF ++R+ A Sbjct: 6 SIRGARQHNLRNLNLDLPSNKLIVFCGPSGSGKSSLAFDTLFSESRRRFLDCLSARSRQG 65 Query: 674 RDIQGLEHFDKV------IDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVP 719 D D + + ++QS ++ R+ + T + +R L+A Sbjct: 66 MDQPEKPEVDSITGLPPALCLEQSARQQSSRTLLGSITEILDYLRILYAAAG 117 >UniRef50_Q6A9D4 UvrA-like ABC transporter n=2 Tax=Propionibacterium acnes RepID=Q6A9D4_PROAC Length = 779 Score = 527 bits (1357), Expect = e-148, Method: Composition-based stats. Identities = 231/720 (32%), Positives = 357/720 (49%), Gaps = 65/720 (9%) Query: 229 GGTAVVADMDDPKAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQY 288 + V+ L + P GYS +S N+P G C C GLG Sbjct: 105 NARSSVSTASGIAPYLRLLFSRSGSPSAGYSPS------YSPNDPRGMCMDCSGLGYVDD 158 Query: 289 FDPDRVIQNPELSLAGGAIRGWDRRNFYYFQMLKSLADHYKFDVEAPWGSLSANVHKVVL 348 D +I P+ SL GA+R Y K L FD + PW L K++L Sbjct: 159 IDLQELIA-PDRSLNEGAVRFPSFEPGTYRW--KRLVCSGLFDPDVPWKELPEASRKLLL 215 Query: 349 YGSGKENIEFKYMNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREE----LAKFISNR 404 +G G + + F+G++ ++ Y E ++ E+ L + + Sbjct: 216 HGQG------VRLERPLTGYPKHGIFDGIIPRLKASYLEKANAKTTEKEDAALRRIVKRV 269 Query: 405 PCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIG 464 C C G R+ AR +E + S +SI + F + +I E + + Sbjct: 270 VCPHCHGQRINEAARASRIEGLNIAEASHLSIDECIAFIKTIT-----DEITEAPRQAVL 324 Query: 465 DRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDN 524 RL + ++GL YL+L R +TLSGGEAQR+RL S + A + +V+DEPS GLH D Sbjct: 325 ARLNNMRDIGLGYLSLDRPTDTLSGGEAQRLRLVSLLDAPITDATFVMDEPSSGLHPADI 384 Query: 525 ERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVP 584 ERLL +L LRD GNTVI+VEH+ + A DHV+++GPGAG GG V+ EG + + Sbjct: 385 ERLLRSLRKLRDSGNTVIIVEHNLQVLAACDHVVELGPGAGDDGGRVLFEGSPRS-LTRS 443 Query: 585 ESLTGQYMSGKRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGS 644 ++ TG+ + ++ R V+++T AR NNL DV+++ PVG T ++GV+GS Sbjct: 444 DTPTGKALRAGIQLN----RRSRPATDVIEVTHARCNNLGDVSVSFPVGALTVVSGVAGS 499 Query: 645 GKSTLINDTLFPIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATY 704 GKS+L + + +V IDQ P+ + RS+ T Sbjct: 500 GKSSLASAL-------------------------AQQHPEVTIIDQLPLAASSRSSILTA 534 Query: 705 TGVFTPVRELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCD 764 G+ +P+RE F+ + G T FS N G C C+G G V+M F+ D+ PC+ Sbjct: 535 LGLESPIREAFS-----KISGLTTSWFSAN-EKGACPLCKGRGTTHVDMAFMDDVQTPCE 588 Query: 765 QCKGKRYNRETLEIKYK----GKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTY 820 +C G+++N T+ ++ TI +VLD + + E + + + L VGL Y Sbjct: 589 RCGGRKFNETTMAVRLPMGSLNPTIADVLDSGLNQVSELYATQDDVLTVISLLQQVGLGY 648 Query: 821 IRLGQSATTLSGGEAQRVKLARELSKRGTGQT-LYILDEPTTGLHFADIQQLLDVLHKLR 879 + LG++ TLSGGE QR+KL + L + Q + +LDE TTGLH D++QL+ L +L Sbjct: 649 LTLGRTLNTLSGGELQRIKLVQFLKEHREEQESVLVLDEITTGLHPKDVEQLIQFLRRLS 708 Query: 880 DQGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLKPM 939 ++G T + I+HN +I AD+ +DLGP + GG ++ SGT + +A+C S T ++L + Sbjct: 709 ERGATAIAIDHNPGLISQADYNIDLGPGAEAAGGTVVFSGTAQGLADCPESTTGKWLHKL 768 Score = 138 bits (348), Expect = 1e-30, Method: Composition-based stats. Identities = 70/284 (24%), Positives = 109/284 (38%), Gaps = 53/284 (18%) Query: 3 KIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYAR 62 I++ GA+THNL+++ + IP+ L+ V G+SGSGK+SL TL Q+ A+ + Sbjct: 16 SIQIHGAKTHNLRDVTVCIPKHALVGVAGVSGSGKTSLV-STLAVGAQQAVSSLFPAFVQ 74 Query: 63 QFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPR--- 119 L+ +E VD ++GL+ + QK S N RS+V T + I YLRLLF+R G P Sbjct: 75 ARLNTLEPGLVDGLQGLTFTAIVGQKKFSRNARSSVSTASGIAPYLRLLFSRSGSPSAGY 134 Query: 120 ------------CPDHDVP--LAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKT 165 C D + + +++ S EG + P + + Sbjct: 135 SPSYSPNDPRGMCMDCSGLGYVDDIDLQELIAPDRSLNEGA---VRFPSFEPGTYRWKRL 191 Query: 166 -----------LENLASQGYIRARIDGEVCDLSDPPKLELQKKHTI-EVVVDRFKVRDDL 213 + L + + G+ L P L KH I + ++ R K Sbjct: 192 VCSGLFDPDVPWKELPEAS-RKLLLHGQGVRLERP--LTGYPKHGIFDGIIPRLK----- 243 Query: 214 TQRLAESFETALELSGGTAVVADMDDPKAEELLFSANFACPICG 257 A E A + A CP C Sbjct: 244 ----ASYLEKA--------NAKTTEKEDAALRRIVKRVVCPHCH 275 Score = 80.8 bits (198), Expect = 3e-13, Method: Composition-based stats. Identities = 43/157 (27%), Positives = 75/157 (47%), Gaps = 10/157 (6%) Query: 607 ANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGAT 666 + +++ GA+ +NL+DVT+ +P + GVSGSGK++L+ TL AQ+ ++ Sbjct: 11 RSSVGSIQIHGAKTHNLRDVTVCIPKHALVGVAGVSGSGKTSLV-STLAVGAQQAVSSLF 69 Query: 667 IAEPAPYRDIQGLEHFDKVI------DIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPE 720 A + D + + Q R RS+ +T +G+ +R LF+ Sbjct: 70 PAFVQARLNTLEPGLVDGLQGLTFTAIVGQKKFSRNARSSVSTASGIAPYLRLLFSRSG- 128 Query: 721 SRARGYTPGRFSFNVRGGRCEACQGDGVI-KVEMHFL 756 S + GY+P +S N G C C G G + +++ L Sbjct: 129 SPSAGYSPS-YSPNDPRGMCMDCSGLGYVDDIDLQEL 164 Score = 75.0 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 43/190 (22%), Positives = 74/190 (38%), Gaps = 45/190 (23%) Query: 2 DKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYA 61 D IEV AR +NL ++++ P L VV+G++GSGKSSLA SA A Sbjct: 466 DVIEVTHARCNNLGDVSVSFPVGALTVVSGVAGSGKSSLA----------------SALA 509 Query: 62 RQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVG----- 116 +Q P+V I+ L A + RS++ T + +R F+++ Sbjct: 510 QQH------PEVTIIDQLPLA---------ASSRSSILTALGLESPIREAFSKISGLTTS 554 Query: 117 ------EPRCPDHDVPLAAQTVSQMVDNV---LSQPEGKRLMLLAPIIKERKGEHTKTLE 167 + CP +D+V + G++ ++ G T+ Sbjct: 555 WFSANEKGACPLCKGRGTTHVDMAFMDDVQTPCERCGGRKFNETTMAVRLPMGSLNPTIA 614 Query: 168 NLASQGYIRA 177 ++ G + Sbjct: 615 DVLDSGLNQV 624 >UniRef50_B9XUD5 Putative uncharacterized protein n=2 Tax=Helicobacter pylori RepID=B9XUD5_HELPY Length = 467 Score = 524 bits (1349), Expect = e-147, Method: Composition-based stats. Identities = 206/480 (42%), Positives = 288/480 (60%), Gaps = 19/480 (3%) Query: 1 MDKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAY 60 MDKI ++GAR +NLKNI L IP+++ +V TGLSGSGKS+LAFDTLYAEGQRRY+ESLS+Y Sbjct: 1 MDKIIIQGARENNLKNIFLEIPKNQFVVFTGLSGSGKSTLAFDTLYAEGQRRYLESLSSY 60 Query: 61 ARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRC 120 ARQFL + KP+VD IEGL+PAI+I+QK+TS NPRSTVGTITEI+DYLRLLFAR+GE C Sbjct: 61 ARQFLDKVGKPNVDKIEGLTPAIAIDQKTTSKNPRSTVGTITEIYDYLRLLFARIGEQFC 120 Query: 121 PDHDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARID 180 P P+++ S ++ + E ++++LAPIIK++KG LE+L +GY+RA +D Sbjct: 121 PTCLEPISSMNASDIISQICHLEENSKIIILAPIIKDKKGSFNDKLESLRLKGYVRAFVD 180 Query: 181 GEVCDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVADMDDP 240 G + L + L KKHTIE VVDR + + + R+A + E AL+ S G V + D Sbjct: 181 GVMVRLDEEIHLHKTKKHTIEAVVDRVVINSENSSRIASTIEKALKESYGELEVEILQDN 240 Query: 241 KAEEL-LFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPE 299 +S + AC C S ELEP FSFN+P GAC +C GLG + D +++ +P Sbjct: 241 APSIRKHYSEHKACFKCKMSFEELEPLSFSFNSPKGACESCLGLGTKFSLDISKIL-DPN 299 Query: 300 LSLAGGAIR-GWDRRNFYYFQMLKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKENIEF 358 L GAI+ + YY QM + ++ D + L+ +LYG+G E I F Sbjct: 300 TPLNQGAIKVIFGYNRSYYAQMFEGFCEYNGIDTALCFNELNKEQQDALLYGNGTE-ISF 358 Query: 359 KYMNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGTRLRREA 418 + N S + P++G++ +KE +++L+ ++S + C+SCEG RL+ + Sbjct: 359 HFKN-----SPLKRPWKGIIQIAYDMFKE------QKDLSDYMSEKTCSSCEGHRLKASS 407 Query: 419 RHVYVENTPLPAISDMSIGHAMEFFNNLK----LAGQRAKIAEKILKEIGDRLKFLVNVG 474 V V + I FFN+ L Q KIAE ILKEI +R+ F G Sbjct: 408 LSVQVAGLKMADFLTKPIEEVYHFFNDPTHFSYLNEQEKKIAEPILKEILERVFFYTMWG 467 Score = 89.7 bits (221), Expect = 5e-16, Method: Composition-based stats. Identities = 43/112 (38%), Positives = 60/112 (53%), Gaps = 6/112 (5%) Query: 615 LTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAEPAPYR 674 + GAR NNLK++ L +P F TG+SGSGKSTL DTL+ QR+ + + + Sbjct: 6 IQGARENNLKNIFLEIPKNQFVVFTGLSGSGKSTLAFDTLYAEGQRRYLESLSSYARQFL 65 Query: 675 DIQGLEHFDKV------IDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPE 720 D G + DK+ I IDQ + PRS T T ++ +R LFA + E Sbjct: 66 DKVGKPNVDKIEGLTPAIAIDQKTTSKNPRSTVGTITEIYDYLRLLFARIGE 117 >UniRef50_UPI00019058DE excinuclease ABC subunit A n=1 Tax=Rhizobium etli Kim 5 RepID=UPI00019058DE Length = 501 Score = 515 bits (1326), Expect = e-144, Method: Composition-based stats. Identities = 234/501 (46%), Positives = 319/501 (63%), Gaps = 24/501 (4%) Query: 1 MDKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAY 60 + I +RGAR HNLK+I+L +PR+KLIV+TGLSGSGKSSLAFDT+YAEGQRRYVESLSAY Sbjct: 4 LKTISIRGAREHNLKSIDLDLPRNKLIVMTGLSGSGKSSLAFDTIYAEGQRRYVESLSAY 63 Query: 61 ARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRC 120 ARQFL +M+KPDVD I+ LSP + P VGT ++ Y L R P Sbjct: 64 ARQFLEMMQKPDVDQIDRLSPGHFDRAEDHLAKPALDVGTSRDLRLYAPALCPR-RRPYS 122 Query: 121 PDHDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARID 180 P +P+ +QTVSQMVD +L+ EG RL +LAP+++ RKGE+ K L L +G+ R ++D Sbjct: 123 PATGLPIESQTVSQMVDRILAFGEGTRLYILAPLVRGRKGEYKKELAELMKKGFQRVKVD 182 Query: 181 GEVCDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVADMDDP 240 G+ ++++ P L+ + KH I+VVVDR VR D++ RLA+S ET L+L+ G AV D P Sbjct: 183 GQFYEIAEAPVLDKKYKHDIDVVVDRIVVRSDVSARLADSLETCLKLADGLAVAEFADKP 242 Query: 241 ------------------KAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDG 282 E +LFS FACP+ G+++ E+EPRLFSFNNP GACPTCDG Sbjct: 243 LPPEETSAGGSANKSLNETHERVLFSEKFACPVSGFTIPEIEPRLFSFNNPFGACPTCDG 302 Query: 283 LGVQQYFDPDRVIQNPELSLAGGAIRGWDRRNF-YYFQMLKSLADHYKFDVEAPWGSLSA 341 LG QQ DPD ++ PE +L GAI W + YY Q L++L HY F + W LSA Sbjct: 303 LGAQQKIDPDLIVPEPERTLRDGAIAPWAKSTSPYYNQTLEALGKHYGFKLGTRWNDLSA 362 Query: 342 NVHKVVLYGSGKENIEFKYMNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFI 401 V+L G+ + IEF Y + + FEG++ N+ERR+KET+S+ RE++ +F+ Sbjct: 363 EAKDVILNGTDDK-IEFHYADGA-RSFTTHKNFEGIITNLERRWKETDSAWAREDIERFM 420 Query: 402 SNRPCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLK--LAGQRAKIAEKI 459 S PC +C G RL+ EA V + + +++MSI A ++F L ++ +IA +I Sbjct: 421 SAAPCPACNGYRLKPEALAVKINRLHIGEVTEMSIRVARDWFETLPASFNAKQNEIAVRI 480 Query: 460 LKEIGDRLKFLVNVGLNYLTL 480 LKEI DRL+FL +VGL YL+L Sbjct: 481 LKEIRDRLRFLNDVGLEYLSL 501 Score = 75.0 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 45/175 (25%), Positives = 75/175 (42%), Gaps = 13/175 (7%) Query: 614 KLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAEPAPY 673 + GAR +NLK + L LP +TG+SGSGKS+L DT++ QR+ + A + Sbjct: 8 SIRGAREHNLKSIDLDLPRNKLIVMTGLSGSGKSSLAFDTIYAEGQRRYVESLSAYARQF 67 Query: 674 RDIQGLEHFDKVIDIDQSPIGRTPRS--NPATYTGVFTPVRELFAGVPESRARGYTPGRF 731 ++ D++ + R PA G +R L+A R R Y+P Sbjct: 68 LEMMQKPDVDQIDRLSPGHFDRAEDHLAKPALDVGTSRDLR-LYAPALCPRRRPYSP--- 123 Query: 732 SFNVRGGRCEACQGDGVIKVEMHFLPD--IYVPCDQCKGKR--YNRETLEIKYKG 782 G E+ ++ + F +Y+ +G++ Y +E E+ KG Sbjct: 124 ---ATGLPIESQTVSQMVDRILAFGEGTRLYILAPLVRGRKGEYKKELAELMKKG 175 Score = 48.4 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 25/76 (32%), Positives = 35/76 (46%), Gaps = 16/76 (21%) Query: 761 VPCDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAVPA--------------- 805 PC C G R E L +K I EV +M+I AR++F+ +PA Sbjct: 423 APCPACNGYRLKPEALAVKINRLHIGEVTEMSIRVARDWFETLPASFNAKQNEIAVRILK 482 Query: 806 -LARKLQTLMDVGLTY 820 + +L+ L DVGL Y Sbjct: 483 EIRDRLRFLNDVGLEY 498 >UniRef50_UPI0001B5406F UvrA-like protein n=1 Tax=Streptomyces sp. AA4 RepID=UPI0001B5406F Length = 748 Score = 515 bits (1326), Expect = e-144, Method: Composition-based stats. Identities = 239/811 (29%), Positives = 373/811 (45%), Gaps = 93/811 (11%) Query: 133 SQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARIDGEVCDLSDPPKL 192 Q+V GK + A + E + + T+ P+ Sbjct: 26 HQLVAVTGVSGSGKSSLAFATLAAESRRQLYSTMPAFVR----------TKLPHDPAPEA 75 Query: 193 ELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVADMDDPKAEELLFSANFA 252 T VVVD+ + + V + + + Sbjct: 76 SSLSGLTTVVVVDQRPLGTNSRS-----------------TVGTATEVWTMLRMLFSRLG 118 Query: 253 CPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPELSLAGGAIRGWDR 312 P GYS +SFN+P+G CP C GLG D +R+I + E SL GA+ Sbjct: 119 EPSAGYSP------AYSFNDPSGMCPACAGLGTVTDIDGERMI-DRERSLNDGAMVF--P 169 Query: 313 RNFYYFQMLKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKENIEFKYMNDRGDTSIRRH 372 + K FD + P ++ + +L+G ++ + Sbjct: 170 SFAVGSWIWKRYVYSGFFDNDLPLREWPEDLVQFLLHGPTQKP------PNPLPRFPASA 223 Query: 373 PFEGVLHNMERRYKETE---SSAVREELAKFISNRPCASCEGTRLRREARHVYVENTPLP 429 ++ ++ + R E E AVR LA RPC C+G+RL AR + + Sbjct: 224 KYQSMVPRIRRLLVEREAKMGPAVRAALADVTRQRPCPECDGSRLAPAARESRINGVSIV 283 Query: 430 AISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTLSRSAETLSG 489 + +EF L + A ++ + RL+ ++ +GL +L R+ TLSG Sbjct: 284 DLGYRDAAGLLEFCAGL-----DHEWARPLVAALRLRLESMITLGLGHLHCYRATPTLSG 338 Query: 490 GEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDED 549 GE+QR++L +G+ L + YVLDEP+ GLH D L+ L LRD GNTV+VV+H E Sbjct: 339 GESQRLKLVRHLGSSLTDLTYVLDEPTDGLHPADVASLVDVLRRLRDHGNTVLVVDHHEA 398 Query: 550 AIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEVPKKRVPANP 609 + AADHVID+GPGAG GG VV GP E + ++ T + + ++ K P Sbjct: 399 VMVAADHVIDLGPGAGEAGGRVVFHGPPEKLRKA-DTTTARALRTGVRL----KDTLREP 453 Query: 610 EKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAE 669 L L G + L+++ + +P G+ T ITGV+GSGKSTL + Sbjct: 454 TGWLPLRGLDRHTLRNIDVDVPTGVLTVITGVAGSGKSTLAGEL---------------- 497 Query: 670 PAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESRARGYTPG 729 E + +DQS I T RS T+ G+ PV+ FA V G +P Sbjct: 498 ---------AERHPRFTVVDQSQIVATSRSTVGTWLGLADPVQRAFAEVS-----GESPK 543 Query: 730 RFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKYKGKTIHEVL 789 F+ +GG C AC+G GV + ++ FL D+ PC++ + + E L+ ++ T+ EVL Sbjct: 544 LFNPRSQGG-CPACRGTGVRRTDLAFLEDVDTPCEEGR-PGFRPEALQARW-SLTVLEVL 600 Query: 790 DMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGT 849 + A + P + R L ++GL ++ G++ TLSGGE QR+KLAR+L Sbjct: 601 ATPVS-ALARYVPHPDVVRLAALLGELGLGHLASGRTLDTLSGGERQRLKLARQLDSTSD 659 Query: 850 GQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADWIVDLGPEGG 909 ++DEPT GLH +D +++ +L +L D+G T+VV+EH+L V+ ADW++DLGP G Sbjct: 660 D---LLVDEPTAGLHPSDTTRMVALLDRLVDEGRTLVVVEHSLHVVAAADWVLDLGPGAG 716 Query: 910 SGGGEILVSGTPETVAECEASHTARFLKPML 940 GG++L +GTP+ +AE + T R+ + L Sbjct: 717 ENGGQVLYTGTPKGLAEHDG-ATGRYFRSAL 746 Score = 155 bits (393), Expect = 5e-36, Method: Composition-based stats. Identities = 59/170 (34%), Positives = 91/170 (53%), Gaps = 17/170 (10%) Query: 2 DKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYA 61 + I +RG RTHNL ++++ IP+ +L+ VTG+SGSGKSSLAF TL AE +R+ ++ A+ Sbjct: 4 NVISLRGVRTHNLADVDVDIPKHQLVAVTGVSGSGKSSLAFATLAAESRRQLYSTMPAFV 63 Query: 62 RQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPR-- 119 R L P+ + GL+ + ++Q+ N RSTVGT TE+ LR+LF+R+GEP Sbjct: 64 RTKLPHDPAPEASSLSGLTTVVVVDQRPLGTNSRSTVGTATEVWTMLRMLFSRLGEPSAG 123 Query: 120 -------------CPDHD--VPLAAQTVSQMVDNVLSQPEGKRLMLLAPI 154 CP + +M+D S +G + + Sbjct: 124 YSPAYSFNDPSGMCPACAGLGTVTDIDGERMIDRERSLNDGAMVFPSFAV 173 Score = 103 bits (257), Expect = 3e-20, Method: Composition-based stats. Identities = 56/157 (35%), Positives = 79/157 (50%), Gaps = 9/157 (5%) Query: 609 PEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLN----- 663 P V+ L G R +NL DV + +P +TGVSGSGKS+L TL ++RQL Sbjct: 2 PSNVISLRGVRTHNLADVDVDIPKHQLVAVTGVSGSGKSSLAFATLAAESRRQLYSTMPA 61 Query: 664 -GATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESR 722 T P + L V+ +DQ P+G RS T T V+T +R LF+ + E Sbjct: 62 FVRTKLPHDPAPEASSLSGLTTVVVVDQRPLGTNSRSTVGTATEVWTMLRMLFSRLGEP- 120 Query: 723 ARGYTPGRFSFNVRGGRCEACQGDGVI-KVEMHFLPD 758 + GY+P +SFN G C AC G G + ++ + D Sbjct: 121 SAGYSPA-YSFNDPSGMCPACAGLGTVTDIDGERMID 156 Score = 71.6 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 36/153 (23%), Positives = 58/153 (37%), Gaps = 42/153 (27%) Query: 6 VRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQFL 65 +RG H L+NI++ +P L V+TG++GSGKS+LA + Sbjct: 459 LRGLDRHTLRNIDVDVPTGVLTVITGVAGSGKSTLA--------------------GELA 498 Query: 66 SLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARV---------- 115 + V ++Q RSTVGT + D ++ FA V Sbjct: 499 ERHPRFTV-----------VDQSQIVATSRSTVGTWLGLADPVQRAFAEVSGESPKLFNP 547 Query: 116 -GEPRCPDHDVPLAAQTVSQMVDNVLSQPEGKR 147 + CP +T +++V + E R Sbjct: 548 RSQGGCPACRGTGVRRTDLAFLEDVDTPCEEGR 580 >UniRef50_A0M2R3 UvrABC system protein A-like n=1 Tax=Gramella forsetii KT0803 RepID=A0M2R3_GRAFK Length = 1495 Score = 496 bits (1276), Expect = e-138, Method: Composition-based stats. Identities = 208/733 (28%), Positives = 349/733 (47%), Gaps = 70/733 (9%) Query: 220 SFETALELSGGTAVVADMDDPKAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPT 279 E + A + + A + A +A + LFSFN+P G C Sbjct: 81 RVEQSKRFQSVKATFGTLSELSAVFRVLFARYA------GKETMSKSLFSFNHPKGVCER 134 Query: 280 CDGLGVQQYFDPDRVIQNPELSLAGGAIRG-WDRRNFYYFQM----LKSLADHYKFDVEA 334 C G+G +Y D ++++ + +L GA+ Y Q+ L + + F+V+ Sbjct: 135 CRGIGEAEYIDLNKLVGDENKTLREGAVTTTLPNGYIVYSQITVDELNKVCKAHGFNVDI 194 Query: 335 PWGSLSANVHKVVLYGS-------GKENIEFKYMNDRGDTSIRRHPF-EGVLHNMERRYK 386 PW LS +V+L GS GK +IE + R F +G+L M + Sbjct: 195 PWKQLSEEQKEVILNGSERIKVFYGKHSIESRLRWKGFKAKPREEGFYKGILPIMSNILR 254 Query: 387 ETESSAVREELAKFISNRPCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNL 446 + + KF+S+ C C+G R++ E + ++S+ + Sbjct: 255 LDRNPN----ILKFVSSSICPDCKGARIKPEHLKFKWKGLNFQEWMELSLKDLYDLLKRQ 310 Query: 447 KLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLV 506 L + +KI ++ D L+ +G+ +L+ + +S G+AQRI+L Q+ + L Sbjct: 311 NLVAGEQVLVDKICDQLFD----LIRLGMEEYSLNTPSTDISSGDAQRIKLIRQVNSSLQ 366 Query: 507 GVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGV 566 G++YV DEPSIGL + + L L L GNTV+VVEHD + I++AD ++++GP AGV Sbjct: 367 GILYVFDEPSIGLSEDYQDYLRHILNRLISRGNTVMVVEHDLNFIKSADWIVELGPKAGV 426 Query: 567 HGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEVPKKRVPANPEKVLKLTGARGNNLKDV 626 HGGEV+ G ++ ++ + + + + N D+ Sbjct: 427 HGGEVIFNGSIQEFLSAEK--------------ISSPTLAELRNTTFRNDKEVKNESVDL 472 Query: 627 TLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAEPAPYRDIQGLEHFDKVI 686 P L + K+ LI + L ++ K++ Sbjct: 473 FQPQPDELMLV------TRKTPLIMERLSNYCEKNDL--------------------KLL 506 Query: 687 DIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESRARGYTPGRFSFNVRGGRCEACQGD 746 + PIG+TPRSNPATYTG+ +R+L A PES++ T FSFN + GRCEAC+G Sbjct: 507 SVSDQPIGKTPRSNPATYTGLADKIRDLLAKSPESKSLNLTKTAFSFNNKRGRCEACEGA 566 Query: 747 GVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAVPAL 806 GVI + M+ + I C +C GKR+ E L++ + K I ++ +++I EA +FF L Sbjct: 567 GVITLSMNVMGTINQICPRCNGKRFKAEVLQVHWNKKNISDIYNLSISEAYDFFSEEKQL 626 Query: 807 ARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFA 866 + L ++ +GL YI+LGQ + TLSGGEAQR+KL + +K+ + +TL +L+EP+ GLH Sbjct: 627 QKILSLMLQLGLGYIKLGQPSNTLSGGEAQRIKLTKHFAKQ-SKKTLLLLEEPSIGLHQQ 685 Query: 867 DIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAE 926 ++++LL LH+L+ Q I+ E + ++D +VD + + ++ V Sbjct: 686 NVRELLKALHQLKAQTAGIICFESHPLFRSSSDMLVDNASKTPELKPKKVLDQR-RDVIS 744 Query: 927 CEASHTARFLKPM 939 + + T +LK + Sbjct: 745 IKGART-HYLKDL 756 Score = 405 bits (1040), Expect = e-111, Method: Composition-based stats. Identities = 176/678 (25%), Positives = 312/678 (46%), Gaps = 37/678 (5%) Query: 231 TAVVADMDDPKAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFD 290 + +A + A Y +EL FS N+ G C CDG+G + D Sbjct: 834 RSDIAKQTGIDKMLRFAFSRKA----QYENKELSASHFSNNHELGKCAICDGIGEELLPD 889 Query: 291 PDRVIQNPELSLAGG------AIRGWDRRNFYYFQMLKSLADHYKFDVEAPWGSLSANVH 344 D+++ + S+A G A+ + Y +++ L Y F ++ P+ L+ N Sbjct: 890 LDKIVLDEGKSIADGLFEHNKALGYYGHAGSQYMAIVEELGATYGFSLKTPFKKLTNNQK 949 Query: 345 KVVLYGSGKENIEFKYMND---RGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFI 401 +++ G+G+ + R +EG+ H ++ Y +T + ++L Sbjct: 950 EILFNGTGETVWNTSWQFKTKTREGEQELSMQWEGLFHYLKEEYYKTRKNKHIDKLKALF 1009 Query: 402 SNRPCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQ-RAKIAEKIL 460 S C C G+ L+ E + + I +S ++ +N + K+ KI Sbjct: 1010 SLAECGHCSGSGLKPERLDFKIGGKSIHEIKLLSFEALEDWLSNDNFQEEIDKKLLSKIK 1069 Query: 461 KEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLH 520 + + + + + +NYL L R + +LSGGE QR+ L Q+ + L G+ Y+LDEPS GL Sbjct: 1070 PYLSNTINRAMQLHINYLQLHRKSSSLSGGENQRVALIKQLNSPLKGITYLLDEPSAGLS 1129 Query: 521 QRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAI 580 + L+ L L + GNTV+V+EH+++ I +AD ++ +GP AG GG + +G + Sbjct: 1130 SDNIPDLINILKELIEKGNTVVVIEHNKEIILSADQLVQVGPEAGKPGGYITYQGTPKNF 1189 Query: 581 MAVPESLTGQYMSGKRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITG 640 + +++ Y+ K + + + ++L TL +P+G T I+G Sbjct: 1190 LK--QAICHPYLKKPSKAVA-----LKCAKDAINIQKLNKHSLVKDTLEVPIGGITAISG 1242 Query: 641 VSGSGKSTLINDTLFPIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSN 700 SG GK+TL+ D L P + P I+ + + + + + ++ Sbjct: 1243 KSGIGKTTLVKDILIPSIETNT-------PINCGSIKFPQTYKEAHYFEAKKLRSHAKTL 1295 Query: 701 PATYTGVFTPVRELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIY 760 +Y + + ++FA P FS+ + +C C+G G ++ + + + Sbjct: 1296 LVSYLNLLKDISKIFAHETA-----LKPRDFSYKTKTSQCPNCKGKGYLETSLDVVANSI 1350 Query: 761 VPCDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAV--PALARKLQTLMDVGL 818 C+ C+GKRYN + L + K I ++L I E +E+ + L L +VGL Sbjct: 1351 EKCEVCQGKRYNDDILRHTVRSKNIADILAFNINELKEWVQGEVPEKTLQFLDQLEEVGL 1410 Query: 819 TYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKL 878 ++ L Q +LS GE QR+ L L + G +TLYILDEP+ GLH+ADI L +L KL Sbjct: 1411 AHLSLDQPVQSLSSGEKQRLLLLNWL-QDGATKTLYILDEPSIGLHYADIDLLYSILEKL 1469 Query: 879 RDQGNTIVVIEHNLDVIK 896 N I++I+HN +++ Sbjct: 1470 SKA-NDILIIDHNPYLLE 1486 Score = 170 bits (430), Expect = 3e-40, Method: Composition-based stats. Identities = 91/355 (25%), Positives = 148/355 (41%), Gaps = 53/355 (14%) Query: 403 NRPCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKE 462 N+ C C G R + E V+ + I ++SI A +FF+ K+ Sbjct: 580 NQICPRCNGKRFKAEVLQVHWNKKNISDIYNLSISEAYDFFSE--------------EKQ 625 Query: 463 IGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQR 522 + L ++ +GL Y+ L + + TLSGGEAQRI+L + +L+EPSIGLHQ+ Sbjct: 626 LQKILSLMLQLGLGYIKLGQPSNTLSGGEAQRIKLTKHFAKQSKKTLLLLEEPSIGLHQQ 685 Query: 523 DNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMA 582 + LL L L+ +I E ++D ++D Sbjct: 686 NVRELLKALHQLKAQTAGIICFESHPLFRSSSDMLVD----------------------- 722 Query: 583 VPESLTGQYMSGKRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVS 642 + + E+ K+V V+ + GAR + LKD+ + LP + ITG+S Sbjct: 723 ----------NASKTPELKPKKVLDQRRDVISIKGARTHYLKDLDIDLPKNQLSVITGIS 772 Query: 643 GSGKSTLINDTLFPIAQRQLNGATIAEPAPYRDIQGLEHFDKV------IDIDQSPIGRT 696 GSGKS+++ DTL +++ A + D + I I + T Sbjct: 773 GSGKSSMVIDTLHGYGLQEMTKQFSAYQQSRVGVNFQFEVDHIAGLSPTICITRKTKSFT 832 Query: 697 PRSNPATYTGVFTPVRELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKV 751 RS+ A TG+ +R F+ + + + FS N G+C C G G + Sbjct: 833 ERSDIAKQTGIDKMLRFAFSRKAQYENKELSASHFSNNHELGKCAICDGIGEELL 887 Score = 135 bits (340), Expect = 9e-30, Method: Composition-based stats. Identities = 48/116 (41%), Positives = 74/116 (63%) Query: 2 DKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYA 61 D I ++GARTH LK++++ +P+++L V+TG+SGSGKSS+ DTL+ G + + SAY Sbjct: 741 DVISIKGARTHYLKDLDIDLPKNQLSVITGISGSGKSSMVIDTLHGYGLQEMTKQFSAYQ 800 Query: 62 RQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGE 117 + + + + +VDHI GLSP I I +K+ S RS + T I LR F+R + Sbjct: 801 QSRVGVNFQFEVDHIAGLSPTICITRKTKSFTERSDIAKQTGIDKMLRFAFSRKAQ 856 Score = 130 bits (328), Expect = 2e-28, Method: Composition-based stats. Identities = 61/182 (33%), Positives = 98/182 (53%), Gaps = 16/182 (8%) Query: 761 VPCDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLM------ 814 C C G E L+ K GK+IHE+ ++ E ++ + L+ Sbjct: 1012 AECGHCSGSGLKPERLDFKIGGKSIHEIKLLSFEALEDWLSNDNFQEEIDKKLLSKIKPY 1071 Query: 815 ---------DVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHF 865 + + Y++L + +++LSGGE QRV L ++L+ G T Y+LDEP+ GL Sbjct: 1072 LSNTINRAMQLHINYLQLHRKSSSLSGGENQRVALIKQLNSPLKGIT-YLLDEPSAGLSS 1130 Query: 866 ADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVA 925 +I L+++L +L ++GNT+VVIEHN ++I +AD +V +GPE G GG I GTP+ Sbjct: 1131 DNIPDLINILKELIEKGNTVVVIEHNKEIILSADQLVQVGPEAGKPGGYITYQGTPKNFL 1190 Query: 926 EC 927 + Sbjct: 1191 KQ 1192 Score = 122 bits (307), Expect = 6e-26, Method: Composition-based stats. Identities = 80/289 (27%), Positives = 126/289 (43%), Gaps = 28/289 (9%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 63 + + A +NLKNINL IP ++LIVVTGLSGSGKSSLA D + EG R ++ESL AY++Q Sbjct: 1 MRIINAYQNNLKNINLNIPENQLIVVTGLSGSGKSSLAMDVIANEGYRYFLESLPAYSQQ 60 Query: 64 FLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVG------- 116 L+ +VD IEGL P I +EQ + ++T GT++E+ R+LFAR Sbjct: 61 NAQLIPTAEVDDIEGLPPVIRVEQSKRFQSVKATFGTLSELSAVFRVLFARYAGKETMSK 120 Query: 117 --------EPRCPDHDVPLAAQTVS--QMVDNVLSQPEGKRLMLLAP--IIKERKGEHTK 164 + C A+ + ++V + + P I + + Sbjct: 121 SLFSFNHPKGVCERCRGIGEAEYIDLNKLVGDENKTLREGAVTTTLPNGYIVYSQITVDE 180 Query: 165 TLENLASQGYIRARIDGEVCDLSDPPK-LELQKKHTIEVVVDRFKVRDDLT--QRLAESF 221 + + G+ +D LS+ K + L I+V + + L A+ Sbjct: 181 LNKVCKAHGFN---VDIPWKQLSEEQKEVILNGSERIKVFYGKHSIESRLRWKGFKAKPR 237 Query: 222 ETALELS--GGTAVVADMDDPKAEELLFSANFACPICGYSMRELEPRLF 268 E + + +D L F ++ CP C + + E F Sbjct: 238 EEGFYKGILPIMSNILRLDRNPN-ILKFVSSSICPDCKGARIKPEHLKF 285 Score = 75.0 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 35/133 (26%), Positives = 59/133 (44%), Gaps = 9/133 (6%) Query: 631 PVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATI------AEPAPYRDIQGLEHFDK 684 P +TG+SGSGKS+L D + R + A+ P ++ +E Sbjct: 19 PENQLIVVTGLSGSGKSSLAMDVIANEGYRYFLESLPAYSQQNAQLIPTAEVDDIEGLPP 78 Query: 685 VIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESRARGYTPGRFSFNVRGGRCEACQ 744 VI ++QS ++ ++ T + + R LFA + + FSFN G CE C+ Sbjct: 79 VIRVEQSKRFQSVKATFGTLSELSAVFRVLFARY--AGKETMSKSLFSFNHPKGVCERCR 136 Query: 745 GDGV-IKVEMHFL 756 G G ++++ L Sbjct: 137 GIGEAEYIDLNKL 149 >UniRef50_A9U6S5 Predicted protein (Fragment) n=6 Tax=cellular organisms RepID=A9U6S5_PHYPA Length = 804 Score = 494 bits (1271), Expect = e-138, Method: Composition-based stats. Identities = 242/457 (52%), Positives = 323/457 (70%), Gaps = 2/457 (0%) Query: 269 SFNNPAGACPTCDGLGVQQYFDPDRVIQNPELSLAGGAIRGWDRR-NFYYFQMLKSLADH 327 S +P GACP CDGLGV+ DP+ +I + E S+ GA W + YY Q LKS+ +H Sbjct: 349 SKADPFGACPECDGLGVKMIVDPELLIPDREKSIDDGAFLAWTGSTSNYYPQFLKSVCEH 408 Query: 328 YKFDVEAPWGSLSANVHKVVLYGSGKENIEFKYMNDRGDTSIRRHPFEGVLHNMERRYKE 387 Y P L +LYG+G + + F+Y ND G FEGV+ N+ERRY+E Sbjct: 409 YNIPQNVPVSQLKEEDMNKLLYGTGNQKVRFRYENDFGQRKEAFVVFEGVIPNLERRYRE 468 Query: 388 TESSAVREELAKFISNRPCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLK 447 T S +RE + F+S +PC C+G RL++E V V + + ++ +SIG AM+ F+ L+ Sbjct: 469 TASEGIREFIENFMSAKPCEVCKGHRLKKEVLAVTVNDYNMAHVTSLSIGEAMKLFDQLE 528 Query: 448 LAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVG 507 L+ + IA ILKEI RL FLVNVGL+YLTLSR+A TLSGGEAQRIRLA+QIG+ L+G Sbjct: 529 LSEKERSIANLILKEINARLGFLVNVGLDYLTLSRAAGTLSGGEAQRIRLATQIGSSLMG 588 Query: 508 VMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVH 567 V+Y+LDEPSIGLHQRDN+RL+ TL H+RD+GNT+IVVEHDED + AAD++IDIGPGAG+H Sbjct: 589 VLYILDEPSIGLHQRDNDRLISTLEHMRDIGNTLIVVEHDEDTMMAADYIIDIGPGAGIH 648 Query: 568 GGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEVPKKRVPANPEKVLKLTGARGNNLKDVT 627 GG V+A+G E IM P SLTGQY+SG++ I V +R + + L++ GA+ NNLK++ Sbjct: 649 GGRVIAQGTPEEIMKDPNSLTGQYLSGRKFIPVNTERRKPD-NRWLEIRGAKENNLKNIN 707 Query: 628 LTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAEPAPYRDIQGLEHFDKVID 687 +PVG+FT +TGVSGSGKSTL+N+ L+ R+LN A P +++I+GLEH +KVID Sbjct: 708 AKIPVGVFTAVTGVSGSGKSTLVNEILYKTLARELNKAVKVRPGQHKEIRGLEHLEKVID 767 Query: 688 IDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESRAR 724 IDQSPIGRTPRSNPATYTGVF +R+++A E++ R Sbjct: 768 IDQSPIGRTPRSNPATYTGVFDDIRDIYAQTNEAKIR 804 Score = 177 bits (449), Expect = 2e-42, Method: Composition-based stats. Identities = 72/189 (38%), Positives = 109/189 (57%), Gaps = 15/189 (7%) Query: 762 PCDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAVP--------------ALA 807 PC+ CKG R +E L + + V ++I EA + FD + + Sbjct: 486 PCEVCKGHRLKKEVLAVTVNDYNMAHVTSLSIGEAMKLFDQLELSEKERSIANLILKEIN 545 Query: 808 RKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFAD 867 +L L++VGL Y+ L ++A TLSGGEAQR++LA ++ G LYILDEP+ GLH D Sbjct: 546 ARLGFLVNVGLDYLTLSRAAGTLSGGEAQRIRLATQIGSSLMG-VLYILDEPSIGLHQRD 604 Query: 868 IQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAEC 927 +L+ L +RD GNT++V+EH+ D + AD+I+D+GP G GG ++ GTPE + + Sbjct: 605 NDRLISTLEHMRDIGNTLIVVEHDEDTMMAADYIIDIGPGAGIHGGRVIAQGTPEEIMKD 664 Query: 928 EASHTARFL 936 S T ++L Sbjct: 665 PNSLTGQYL 673 Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats. Identities = 40/118 (33%), Positives = 60/118 (50%), Gaps = 6/118 (5%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 63 +E+RGA+ +NLKNIN IP VTG+SGSGKS+L + LY R +++ Q Sbjct: 693 LEIRGAKENNLKNINAKIPVGVFTAVTGVSGSGKSTLVNEILYKTLARELNKAVKVRPGQ 752 Query: 64 FLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCP 121 ++ +E L I I+Q PRS T T + D +R ++A+ E + Sbjct: 753 H------KEIRGLEHLEKVIDIDQSPIGRTPRSNPATYTGVFDDIRDIYAQTNEAKIR 804 >UniRef50_P52087 UvrABC system protein A (Fragment) n=44 Tax=Bacteria RepID=UVRA_PSELE Length = 689 Score = 478 bits (1231), Expect = e-133, Method: Composition-based stats. Identities = 196/594 (32%), Positives = 308/594 (51%), Gaps = 42/594 (7%) Query: 223 TALELSGG----TAVVADMDDPKAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACP 278 AL+ G + V + + + G + L FS N P GACP Sbjct: 100 IALQQQRGAPTTRSSVGSITTLSNSLRMLYSRAGNYPKGQDI--LYAESFSPNTPEGACP 157 Query: 279 TCDGLGVQQYFDPDRVIQNPELSLAGGAIRGWDRRNFYYFQMLKSLADHYKFDVEAPWGS 338 TC GLG ++ + ++ AI W ++ Q L+ + +D++ PW Sbjct: 158 TCHGLGRVYEVTEQSMVPDDSKTIRERAIAAWPP--AWHGQNLRDILTTLGYDIDIPWRD 215 Query: 339 LSANVHKVVLYGSGKENIEF---------KYMNDRGDTSIRRHPFEGVLHNMERRYKETE 389 L K +L+ + + ++ R +T + F + + TE Sbjct: 216 LPKKDRKWILFTEEQPVVPVYAGFTLDEVRHALKRKETPSYQGTFTSARKYVLDTFANTE 275 Query: 390 SSAVREELAKFISNRPCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKL- 448 S A+++ +++++ + C C+G RLR E+ V + +S + + H + Sbjct: 276 SPAMKKRVSQYMVGKECTLCQGKRLRPESLAVTFAGYDITELSRLPLKHLATLLHPYAQE 335 Query: 449 -----------AGQRAKIAEKILKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRL 497 ++A + ++I +++ +RL L+++GL YLTL RS TLS GE QR+RL Sbjct: 336 NTPDWDKLAAKNPEKAIVTQRIAEDLSNRLSVLLSLGLGYLTLERSTPTLSPGELQRLRL 395 Query: 498 ASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHV 557 A+Q+ + L GV+YVLDEPS GLH D + LL L L+ GN++ VVEH IR AD + Sbjct: 396 ATQVHSNLFGVVYVLDEPSAGLHPADTQALLAALDRLKQAGNSLFVVEHALGVIRHADWI 455 Query: 558 IDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEVPKKRVPANPEKVLKLTG 617 +D+GP AG HGG ++ GP + + V ES T +Y+ ++ ++ K+ +P+ L++ G Sbjct: 456 VDVGPEAGEHGGRILYSGPPQGLSEVAESHTRRYLFPDKEADIFAKQPSRSPQGWLQVAG 515 Query: 618 ARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAEPAPYRDIQ 677 NNL ++T P+G+ T ++GVSGSGKS+L++ L + + L +AE I+ Sbjct: 516 VTRNNLDNLTAAFPLGVLTSVSGVSGSGKSSLVSQVLVELVSKALGQELVAEAEQGESIE 575 Query: 678 -------------GLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESRAR 724 G+E +++ +DQ PIGRTPRSN ATYTG+F VR+LFA ++AR Sbjct: 576 HDTPATLGGRITAGMESIKRLVTVDQKPIGRTPRSNLATYTGLFDHVRKLFASTRAAKAR 635 Query: 725 GYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEI 778 Y GRFSFNV GRC C+G+G + VE+ FLP +Y PC CKG R+N +TLEI Sbjct: 636 HYDAGRFSFNVAKGRCGNCEGEGFVMVELLFLPSVYAPCPVCKGTRFNAKTLEI 689 Score = 181 bits (460), Expect = 1e-43, Method: Composition-based stats. Identities = 73/190 (38%), Positives = 105/190 (55%), Gaps = 22/190 (11%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 63 ++VRGAR HNLK+++L IPR+ L+V TG+SGSGKSSLAF TLYAE QRRY+ES+S YAR+ Sbjct: 21 VQVRGAREHNLKDVHLDIPRNALVVFTGISGSGKSSLAFGTLYAEAQRRYLESVSPYARR 80 Query: 64 FLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVG------- 116 M P+VD IEGL PAI+++Q+ + RS+VG+IT + + LR+L++R G Sbjct: 81 LFHQMSVPEVDSIEGLPPAIALQQQRGAPTTRSSVGSITTLSNSLRMLYSRAGNYPKGQD 140 Query: 117 ------------EPRCPDHDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTK 164 E CP ++ + + + K + A Sbjct: 141 ILYAESFSPNTPEGACPTCHGLGRVY---EVTEQSMVPDDSKTIRERAIAAWPPAWHGQN 197 Query: 165 TLENLASQGY 174 + L + GY Sbjct: 198 LRDILTTLGY 207 Score = 148 bits (374), Expect = 1e-33, Method: Composition-based stats. Identities = 75/202 (37%), Positives = 106/202 (52%), Gaps = 27/202 (13%) Query: 763 CDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFF---------------DAVPALA 807 C C+GKR E+L + + G I E+ + ++ P A Sbjct: 292 CTLCQGKRLRPESLAVTFAGYDITELSRLPLKHLATLLHPYAQENTPDWDKLAAKNPEKA 351 Query: 808 RKLQTLMD-----------VGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYIL 856 Q + + +GL Y+ L +S TLS GE QR++LA ++ G +Y+L Sbjct: 352 IVTQRIAEDLSNRLSVLLSLGLGYLTLERSTPTLSPGELQRLRLATQVHSNLFG-VVYVL 410 Query: 857 DEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEIL 916 DEP+ GLH AD Q LL L +L+ GN++ V+EH L VI+ ADWIVD+GPE G GG IL Sbjct: 411 DEPSAGLHPADTQALLAALDRLKQAGNSLFVVEHALGVIRHADWIVDVGPEAGEHGGRIL 470 Query: 917 VSGTPETVAECEASHTARFLKP 938 SG P+ ++E SHT R+L P Sbjct: 471 YSGPPQGLSEVAESHTRRYLFP 492 Score = 89.7 bits (221), Expect = 5e-16, Method: Composition-based stats. Identities = 47/189 (24%), Positives = 76/189 (40%), Gaps = 17/189 (8%) Query: 612 VLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAEPA 671 +++ GAR +NLKDV L +P TG+SGSGKS+L TL+ AQR+ + Sbjct: 20 FVQVRGAREHNLKDVHLDIPRNALVVFTGISGSGKSSLAFGTLYAEAQRRYLESVSPYAR 79 Query: 672 PYRDIQGLEHFDKV------IDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESRARG 725 + D + I + Q T RS+ + T + +R L++ +G Sbjct: 80 RLFHQMSVPEVDSIEGLPPAIALQQQRGAPTTRSSVGSITTLSNSLRMLYSRAGN-YPKG 138 Query: 726 YT---PGRFSFNVRGGRCEACQGDGVIK--VEMHFLPDIYVPCDQCKGKRYNRETLEIKY 780 FS N G C C G G + E +PD + + + Sbjct: 139 QDILYAESFSPNTPEGACPTCHGLGRVYEVTEQSMVPDDSKTIRERAIAAWPP-----AW 193 Query: 781 KGKTIHEVL 789 G+ + ++L Sbjct: 194 HGQNLRDIL 202 Score = 53.8 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 40/134 (29%), Positives = 60/134 (44%), Gaps = 15/134 (11%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 63 ++V G +NL N+ P L V+G+SGSGKSSL L + + L A A Q Sbjct: 511 LQVAGVTRNNLDNLTAAFPLGVLTSVSGVSGSGKSSLVSQVLVELVSKALGQELVAEAEQ 570 Query: 64 F----------LSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFA 113 L ++ I+ L ++++QK PRS + T T + D++R LFA Sbjct: 571 GESIEHDTPATLGGRITAGMESIKRL---VTVDQKPIGRTPRSNLATYTGLFDHVRKLFA 627 Query: 114 --RVGEPRCPDHDV 125 R + R D Sbjct: 628 STRAAKARHYDAGR 641 >UniRef50_UPI00004C267E COG0178: Excinuclease ATPase subunit n=1 Tax=Streptococcus pyogenes M49 591 RepID=UPI00004C267E Length = 435 Score = 468 bits (1204), Expect = e-130, Method: Composition-based stats. Identities = 209/439 (47%), Positives = 288/439 (65%), Gaps = 8/439 (1%) Query: 219 ESFETALELSGGTAVVADMDDPKAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACP 278 +S E AL L G ++ MD ELLFS +++CP+CG+++ ELEPRLFSFN P G+CP Sbjct: 1 DSVEAALRLGDGYLMIDTMD---GNELLFSEHYSCPVCGFTVPELEPRLFSFNAPFGSCP 57 Query: 279 TCDGLGVQQYFDPDRVIQNPELSLAGGAIRGWDR-RNFYYFQMLKSLADHYKFDVEAPWG 337 TCDGLG++ D D V+ +P SL GA+ W+ + YY ML+ + D++ P+ Sbjct: 58 TCDGLGIKLEVDLDLVVPDPSKSLKEGALAPWNPISSNYYPTMLEQAMASFGVDMDTPFE 117 Query: 338 SLSANVHKVVLYGSGKENIEFKYMNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREEL 397 +L+ +VLYGSG F Y+ND G PFEGV+ N+ RRY ET S R + Sbjct: 118 ALTEEERDLVLYGSGDREFHFHYVNDFGGERNIDIPFEGVVTNVNRRYHETNSDYTRNVM 177 Query: 398 AKFISNRPCASCEGTRLRREARHVYVENT---PLPAISDMSIGHAMEFFNNLKLAGQRAK 454 +++ CA+C G RL +A V+V + IS++SI ++ L+L + Sbjct: 178 RGYMNELTCATCHGYRLNDQALCVHVGGEEGPHIGQISELSIADHLQLLEELELTENEST 237 Query: 455 IAEKILKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDE 514 IA+ I+KEI DRL FL NVGLNYLTLSR+A TLSGGE+QRIRLA+QIG+ L GV+Y+LDE Sbjct: 238 IAKPIVKEIHDRLTFLNNVGLNYLTLSRAAGTLSGGESQRIRLATQIGSNLSGVLYILDE 297 Query: 515 PSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAE 574 PSIGLHQRDN+RL+ +L +RDLGNT+IVVEHDED + AD +ID+GPGAG GGE++A Sbjct: 298 PSIGLHQRDNDRLIESLKKMRDLGNTLIVVEHDEDTMMQADWLIDVGPGAGEFGGEIIAS 357 Query: 575 GPLEAIMAVPESLTGQYMSGKRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGL 634 G + + +S+TGQY+SGK+ I VP +R + + +++ GA NNL+ + + P+G Sbjct: 358 GTPKQVAKNKKSITGQYLSGKKFIPVPLERR-SGNGRFIEIKGASQNNLQSLDVRFPLGK 416 Query: 635 FTCITGVSGSGKSTLINDT 653 F +TGVSGSGKS L+N Sbjct: 417 FIAVTGVSGSGKSALVNSI 435 Score = 163 bits (413), Expect = 3e-38, Method: Composition-based stats. Identities = 72/194 (37%), Positives = 114/194 (58%), Gaps = 18/194 (9%) Query: 760 YVPCDQCKGKRYNRETLEIKY---KGKTIHEVLDMTIEEAREFF--------------DA 802 + C C G R N + L + +G I ++ +++I + + Sbjct: 183 ELTCATCHGYRLNDQALCVHVGGEEGPHIGQISELSIADHLQLLEELELTENESTIAKPI 242 Query: 803 VPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTG 862 V + +L L +VGL Y+ L ++A TLSGGE+QR++LA ++ +G LYILDEP+ G Sbjct: 243 VKEIHDRLTFLNNVGLNYLTLSRAAGTLSGGESQRIRLATQIGSNLSG-VLYILDEPSIG 301 Query: 863 LHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPE 922 LH D +L++ L K+RD GNT++V+EH+ D + ADW++D+GP G GGEI+ SGTP+ Sbjct: 302 LHQRDNDRLIESLKKMRDLGNTLIVVEHDEDTMMQADWLIDVGPGAGEFGGEIIASGTPK 361 Query: 923 TVAECEASHTARFL 936 VA+ + S T ++L Sbjct: 362 QVAKNKKSITGQYL 375 Score = 63.5 bits (153), Expect = 4e-08, Method: Composition-based stats. Identities = 19/41 (46%), Positives = 29/41 (70%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDT 44 IE++GA +NL+++++ P K I VTG+SGSGKS+L Sbjct: 395 IEIKGASQNNLQSLDVRFPLGKFIAVTGVSGSGKSALVNSI 435 >UniRef50_C1ZJW2 Excinuclease ATPase subunit n=1 Tax=Planctomyces limnophilus DSM 3776 RepID=C1ZJW2_PLALI Length = 898 Score = 446 bits (1148), Expect = e-123, Method: Composition-based stats. Identities = 219/596 (36%), Positives = 328/596 (55%), Gaps = 39/596 (6%) Query: 382 ERRYKETESSAVREELAKFISNRPCASCEGTRLRREARHVYVENTPLPAISDMSIGHAME 441 +R+ K + + +A+ +S+ CA C+G+RL ARH + E LP +++ A++ Sbjct: 299 KRQQKSASKAQSQRAVAQVVSSEKCAECQGSRLGEVARHTFWEKRILPDWLKLNVDDALK 358 Query: 442 FFNNLKLAGQRAKIAEK-----------ILKEIGDRLKFLVNVGLNYLTLSRSAETLSGG 490 ++ A Q+ + E+ ++ EI RL L +GL YLTL RSA+TLSGG Sbjct: 359 AMRQIETAWQQEALPERRSTHQGLLRQNLIPEIIRRLDGLQRLGLGYLTLDRSAQTLSGG 418 Query: 491 EAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDA 550 E R RLA+ I + G +VLDEPS GLH+ D R+ L LRD+GNTV+VVEH+ D Sbjct: 419 ELTRSRLATLIASQRKGYCFVLDEPSSGLHRADLYRVKNALNALRDVGNTVVVVEHEVDL 478 Query: 551 IRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKI----EVPKKRVP 606 ++ AD ++++GPGAG GG++V G A PES+ G ++ G R++ + P R Sbjct: 479 LQGADWLVELGPGAGHLGGKLVTAGTPRATAEAPESVIGPWLKGCRQLIRATDSPDDRQH 538 Query: 607 ----------------ANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLI 650 + + + R N+ L L +G C TGVSGSGK+T + Sbjct: 539 DQSSINKALPESIILGSCDAGFITIPPIRVRNVHVPALKLGMGQVVCFTGVSGSGKTTWL 598 Query: 651 NDTLFPIAQRQLNGA-------TIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPAT 703 + + P Q+ LN T+A + +V+ I QSP+GR +S P T Sbjct: 599 MEGILPALQQALNARHQRPGSKTLASGDRSLMATIPDELIEVVTIGQSPVGRGWKSFPMT 658 Query: 704 YTGVFTPVRELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPC 763 G++ VR+++A +++ RG+TP RFS RC C G G + +E FLPD C Sbjct: 659 VAGLWDLVRKIYAATKDAKLRGFTPARFSPWHPEARCPVCLGQGEVTLEADFLPDWKTTC 718 Query: 764 DQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRL 823 + C G R+N TL I+++GK++ +VL M EA EFF LAR L ++GL Y++L Sbjct: 719 ETCAGDRFNPATLAIRFRGKSLGDVLRMEFSEAAEFFANFERLARPLHLFCELGLGYLKL 778 Query: 824 GQSATTLSGGEAQRVKLARELSKRG-TGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQG 882 GQ T+S GEAQR++LA L++ GQ + LDEPTTGLH AD++ LL V +L G Sbjct: 779 GQPMRTVSTGEAQRIRLASYLARPDFQGQRCFALDEPTTGLHPADVKALLKVFDRLVAAG 838 Query: 883 NTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLKP 938 + ++V+EH+LDVI+ A I+DLGP G GG+++ G + + AS T + L+ Sbjct: 839 HLLLVVEHHLDVIRAAHQILDLGPGAGQQGGQLVAWGNQHDLRQNPASLTGQALRR 894 Score = 293 bits (749), Expect = 3e-77, Method: Composition-based stats. Identities = 116/284 (40%), Positives = 168/284 (59%), Gaps = 4/284 (1%) Query: 3 KIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYAR 62 I +RGARTHNL+N+ L +P KL+ VTG+SGSGK+SLA DTL+ EGQRRY+E+L+ R Sbjct: 9 TIRIRGARTHNLQNLTLDLPLGKLVGVTGISGSGKTSLALDTLFVEGQRRYLETLNPQIR 68 Query: 63 QFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCPD 122 + L DVD I+GL P I ++ ++ S PR+T+ T+TEIHD LR+++ R G CP Sbjct: 69 RQLRRQSWADVDEIQGLPPTICLDSRTLSVGPRATLATLTEIHDLLRVVYFRAGVLHCPS 128 Query: 123 HDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARIDGE 182 + T +++D++++ PE +L LLA + + L +A G++RARI+G+ Sbjct: 129 CQSIVEQSTHDEILDDLVALPERTKLQLLAKVDDDPGISPQDRLRQIAQSGFVRARINGK 188 Query: 183 VCDLSDPPKLELQKKHT-IEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVADMDDPK 241 + D SD L IE VVDR ++D + RLAES + AL L G +V +D Sbjct: 189 LIDTSDVFVLPEDAPRPVIEAVVDRVIIKDGIRSRLAESLDVALRLGHGCCLV-TIDG-- 245 Query: 242 AEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGV 285 A + ++ C C S + + R FS + AGACP C LGV Sbjct: 246 APDRHYATIRFCGPCHRSFADPQLRTFSHFSAAGACPACLALGV 289 Score = 137 bits (346), Expect = 2e-30, Method: Composition-based stats. Identities = 75/251 (29%), Positives = 119/251 (47%), Gaps = 45/251 (17%) Query: 731 FSFNVRGGRCEACQGDGVIKVEMHFLPD-------------------IYVPCDQCKGKRY 771 FS G C AC GV E P C +C+G R Sbjct: 272 FSHFSAAGACPACLALGVCLAEESPKPKRQQKSASKAQSQRAVAQVVSSEKCAECQGSRL 331 Query: 772 NRETLEIKYKGKTIHEVLDMTIEEAREFFDA-------------------------VPAL 806 ++ + + + L + +++A + +P + Sbjct: 332 GEVARHTFWEKRILPDWLKLNVDDALKAMRQIETAWQQEALPERRSTHQGLLRQNLIPEI 391 Query: 807 ARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFA 866 R+L L +GL Y+ L +SA TLSGGE R +LA ++ + G ++LDEP++GLH A Sbjct: 392 IRRLDGLQRLGLGYLTLDRSAQTLSGGELTRSRLATLIASQRKG-YCFVLDEPSSGLHRA 450 Query: 867 DIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAE 926 D+ ++ + L+ LRD GNT+VV+EH +D+++ ADW+V+LGP G GG+++ +GTP AE Sbjct: 451 DLYRVKNALNALRDVGNTVVVVEHEVDLLQGADWLVELGPGAGHLGGKLVTAGTPRATAE 510 Query: 927 CEASHTARFLK 937 S +LK Sbjct: 511 APESVIGPWLK 521 Score = 69.6 bits (169), Expect = 6e-10, Method: Composition-based stats. Identities = 40/158 (25%), Positives = 66/158 (41%), Gaps = 23/158 (14%) Query: 614 KLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAEPAPY 673 ++ GAR +NL+++TL LP+G +TG+SGSGK++L DTLF QR+ + Sbjct: 11 RIRGARTHNLQNLTLDLPLGKLVGVTGISGSGKTSLALDTLFVEGQRRYLETLNPQIRRQ 70 Query: 674 RDIQGLEHFDKV------IDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESRARGYT 727 Q D++ I +D + PR+ AT T + +R ++ Sbjct: 71 LRRQSWADVDEIQGLPPTICLDSRTLSVGPRATLATLTEIHDLLRVVY------------ 118 Query: 728 PGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQ 765 F C +CQ L D+ ++ Sbjct: 119 -----FRAGVLHCPSCQSIVEQSTHDEILDDLVALPER 151 Score = 53.5 bits (127), Expect = 4e-05, Method: Composition-based stats. Identities = 31/186 (16%), Positives = 59/186 (31%), Gaps = 21/186 (11%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 63 I + R N+ L + +++ TG+SGSGK++ + + Q+ + Sbjct: 561 ITIPPIRVRNVHVPALKLGMGQVVCFTGVSGSGKTTWLMEGILPALQQALNARHQRPGSK 620 Query: 64 FLSLMEKPDVDHI-EGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARV------- 115 L+ ++ + I + L ++I Q +S T+ + D +R ++A Sbjct: 621 TLASGDRSLMATIPDELIEVVTIGQSPVGRGWKSFPMTVAGLWDLVRKIYAATKDAKLRG 680 Query: 116 ----------GEPRCPDHDVPLAAQTVSQM---VDNVLSQPEGKRLMLLAPIIKERKGEH 162 E RCP + G R I+ R Sbjct: 681 FTPARFSPWHPEARCPVCLGQGEVTLEADFLPDWKTTCETCAGDRFNPATLAIRFRGKSL 740 Query: 163 TKTLEN 168 L Sbjct: 741 GDVLRM 746 >UniRef50_C9YE98 Putative uncharacterized protein n=1 Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9YE98_9BURK Length = 1850 Score = 435 bits (1120), Expect = e-120, Method: Composition-based stats. Identities = 152/497 (30%), Positives = 224/497 (45%), Gaps = 71/497 (14%) Query: 3 KIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYAR 62 I +RGAR HNLKN++L I +L VVTG SGSGKSSL FDTLYAEGQRRYVE+ SAYAR Sbjct: 88 TIRIRGARQHNLKNLDLDIRTGELTVVTGPSGSGKSSLVFDTLYAEGQRRYVETFSAYAR 147 Query: 63 QFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCPD 122 QFL M+KP VD +EG+ PAI+I+Q + + RSTVGT+TE++D+L+LLF+R G D Sbjct: 148 QFLDRMDKPAVDKVEGVPPAIAIDQTNPVRSSRSTVGTMTELNDHLKLLFSRAGSLFDKD 207 Query: 123 HDVPLAAQTVSQMVDNVLSQPE---GKRLMLLAPIIKERKGEHTKTLENLASQGYIRARI 179 +P+ T + +L + RL+L P+ + + L++ G+ R + Sbjct: 208 TALPVQHDTPETIYTTLLQRAAAEGNPRLVLTFPVELPGNATPDEVTQWLSASGFTRVQA 267 Query: 180 DGEVCDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVADMDD 239 + EV ++ K+ ++VV DRF++ R+ E+ ET+L+ G + + Sbjct: 268 EREVSTVNGVRKV-------LDVVADRFRIDGVEKARVLEAIETSLKRGSGRLNAYVLKE 320 Query: 240 -----------------PKAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDG 282 E FS CP + +FSFN+ GAC C G Sbjct: 321 SIAPVDSTRAAPEIIANAAPEIWRFSTGLHCPQSDIRYTDPIASMFSFNSAVGACDACRG 380 Query: 283 LGVQQYFDPDRVIQNPELSLAGGAIRGWDRRNFYYFQ-MLKSLADHYKFDVEAPWGSLSA 341 G D VI N +L+L GA++ + Q L A+ + PW L+A Sbjct: 381 FGRVVGVDYGLVIPNDKLTLRAGAVKPMQTPAWQECQDDLMRHAEASGIPRDTPWYKLTA 440 Query: 342 NVHKVVLYGSGKENIEFKYMNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFI 401 VL GS N ++ + GV E + +R L+K+ Sbjct: 441 EQKHWVLKGSPNWNGKW------------NQHWFGVDRFFEYLETKAYKMHIRVLLSKYR 488 Query: 402 SNRPCASCEGTRLRREARHVYVE-------------------------------NTPLPA 430 S C +C G+RL+ E+ + L Sbjct: 489 SYTTCPTCNGSRLKTESLLWRIGTKDQAYMALDPAKRFMPKGVKWSREQLEALPGLSLHD 548 Query: 431 ISDMSIGHAMEFFNNLK 447 + M + FF+ L+ Sbjct: 549 LMLMPLDRLKRFFDALQ 565 Score = 417 bits (1071), Expect = e-114, Method: Composition-based stats. Identities = 183/400 (45%), Positives = 251/400 (62%), Gaps = 6/400 (1%) Query: 449 AGQRAKIAEKILKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGV 508 + K + + +E+G RLK+L +VG+ YLTL R + TLSGGE QRI L + +G LV Sbjct: 627 SEAEHKTLKLLFEEVGTRLKYLCDVGIGYLTLDRQSRTLSGGEVQRINLTTALGTSLVNT 686 Query: 509 MYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHG 568 ++VLDEPSIGLH RD R++ + LRD GNT++VVEHD + AAD +ID+GPG G G Sbjct: 687 LFVLDEPSIGLHPRDMNRIIVAMQRLRDAGNTLVVVEHDPAVMLAADRMIDMGPGPGEKG 746 Query: 569 GEVVAEGPLEAIMAVPESLTGQYMSGKRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTL 628 G++V +G EA+ +++TG Y+ G++++ + KR+ A L L G +NLK+V++ Sbjct: 747 GQIVFDGTTEALKGA-DTMTGAYLGGRKQVGMGFKRMVAPNNPRLILEGVTEHNLKNVSV 805 Query: 629 TLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDI 688 +P+ C+TGVSGSGKSTLI D L P R G P + + G E ++ + Sbjct: 806 EIPLQRLVCVTGVSGSGKSTLIQDVLAPALLRHF-GKATETPGAHTSLLGAEQLSDMVFV 864 Query: 689 DQSPIGRTPRSNPATYTGVFTPVRELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGV 748 DQSPIG+T RSNP +Y G + +RELFAG SR R YT +FSFN GRC C G G Sbjct: 865 DQSPIGKTARSNPVSYVGAWDAIRELFAGAALSRERSYTAAKFSFNSGDGRCPTCGGSGF 924 Query: 749 IKVEMHFLPDIYVPCDQCKGKRYNRETLEIKY----KGKTIHEVLDMTIEEAREFFDAVP 804 VEM FL D+Y+ C C GKRY E LE+ + + +VL++T+ EA + F A Sbjct: 925 EHVEMQFLSDVYLRCPDCDGKRYRPEILEVTIERKGRHVNVADVLELTVSEAADLFSADR 984 Query: 805 ALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLAREL 844 + R LQ ++DVGL Y++LGQ TLSGGEAQR+KLA L Sbjct: 985 EVIRVLQPIVDVGLEYVKLGQPVPTLSGGEAQRLKLAGFL 1024 Score = 282 bits (721), Expect = 6e-74, Method: Composition-based stats. Identities = 153/494 (30%), Positives = 218/494 (44%), Gaps = 73/494 (14%) Query: 120 CPDHDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARI 179 C + Q+ + +L G+ + LLAP+++ RKG +T+ + +G+ R+ Sbjct: 1251 CYKDGAAVEPQSADSIAAQLLKNYRGQHIGLLAPLVQGRKGVYTELADWARPKGFTHLRV 1310 Query: 180 DGEVCDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVADMDD 239 DG S P+++ K+H IE+ V V L + AL G VV + D Sbjct: 1311 DGNFLPTSGFPRIDRFKEHNIELPVASLDVTPANESALRTALADALTHGKG--VVYVLSD 1368 Query: 240 PKAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPE 299 + + +A + G ++FS ACP C DP Sbjct: 1369 IGSLREVMAAGESAAGVGKV------QVFS---TKRACPVCATS--YAELDPRL------ 1411 Query: 300 LSLAGGAIRGWDRRNFYYFQMLKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKENIEFK 359 + + GW L+ KV F Sbjct: 1412 --FSYNSKHGWCPDCVGTGVA------------------LTKEQRKV-----------FD 1440 Query: 360 YMNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGTRLRREAR 419 D R F + E + C +C GTRL AR Sbjct: 1441 DSVKDDDNKGREQTF---------AEADIEDLHDKA----------CPTCSGTRLNATAR 1481 Query: 420 HVYVENTPLPAISDMSIGHAMEFFNNLKLAG----QRAKIAEKILKEIGDRLKFLVNVGL 475 +V + I+ +S+ ++ L++AG + I+ ++ EI RL+FL VGL Sbjct: 1482 NVKFAGVGITDIARLSVTDVRQWVQTLQVAGGMTTREGDISRDLVPEIRSRLEFLEEVGL 1541 Query: 476 NYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLR 535 YLTL R A TLSGGEAQRIRLA+Q+G+ L GV YVLDEP+IGLH RDN+ LLG L L Sbjct: 1542 GYLTLDRGAPTLSGGEAQRIRLAAQLGSNLQGVCYVLDEPTIGLHARDNKILLGALQSLS 1601 Query: 536 DLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGK 595 D GNT++VVEHDED IR ADH+IDIGP AG GG +VA+G + + PES TG+Y+ Sbjct: 1602 DKGNTLVVVEHDEDTIRHADHIIDIGPSAGKRGGRLVAQGSIADVQNAPESQTGRYLLHS 1661 Query: 596 RKIEVPKKRVPANP 609 K + +R + Sbjct: 1662 MKHPLAVRRGMVSF 1675 Score = 184 bits (467), Expect = 1e-44, Method: Composition-based stats. Identities = 83/253 (32%), Positives = 118/253 (46%), Gaps = 43/253 (16%) Query: 726 YTPGRFSFNVRGGRCEACQGDGV-------IKVEMHFLPDI-----------------YV 761 P FS+N + G C C G GV + D Sbjct: 1407 LDPRLFSYNSKHGWCPDCVGTGVALTKEQRKVFDDSVKDDDNKGREQTFAEADIEDLHDK 1466 Query: 762 PCDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFF------------------DAV 803 C C G R N +K+ G I ++ +++ + R++ D V Sbjct: 1467 ACPTCSGTRLNATARNVKFAGVGITDIARLSVTDVRQWVQTLQVAGGMTTREGDISRDLV 1526 Query: 804 PALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGL 863 P + +L+ L +VGL Y+ L + A TLSGGEAQR++LA +L G Y+LDEPT GL Sbjct: 1527 PEIRSRLEFLEEVGLGYLTLDRGAPTLSGGEAQRIRLAAQLGSNLQG-VCYVLDEPTIGL 1585 Query: 864 HFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPET 923 H D + LL L L D+GNT+VV+EH+ D I+ AD I+D+GP G GG ++ G+ Sbjct: 1586 HARDNKILLGALQSLSDKGNTLVVVEHDEDTIRHADHIIDIGPSAGKRGGRLVAQGSIAD 1645 Query: 924 VAECEASHTARFL 936 V S T R+L Sbjct: 1646 VQNAPESQTGRYL 1658 Score = 139 bits (351), Expect = 5e-31, Method: Composition-based stats. Identities = 52/133 (39%), Positives = 81/133 (60%), Gaps = 2/133 (1%) Query: 804 PALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGL 863 + +L+ L DVG+ Y+ L + + TLSGGE QR+ L L TL++LDEP+ GL Sbjct: 639 EEVGTRLKYLCDVGIGYLTLDRQSRTLSGGEVQRINLTTALGTSLVN-TLFVLDEPSIGL 697 Query: 864 HFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPET 923 H D+ +++ + +LRD GNT+VV+EH+ V+ AD ++D+GP G GG+I+ GT E Sbjct: 698 HPRDMNRIIVAMQRLRDAGNTLVVVEHDPAVMLAADRMIDMGPGPGEKGGQIVFDGTTEA 757 Query: 924 VAECEASHTARFL 936 + + T +L Sbjct: 758 LKGA-DTMTGAYL 769 Score = 90.0 bits (222), Expect = 4e-16, Method: Composition-based stats. Identities = 53/193 (27%), Positives = 75/193 (38%), Gaps = 38/193 (19%) Query: 3 KIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYAR 62 ++ + G HNLKN+++ IP +L+ VTG+SGSGKS+L D L A R Sbjct: 789 RLILEGVTEHNLKNVSVEIPLQRLVCVTGVSGSGKSTLIQDVLA-----------PALLR 837 Query: 63 QFLSLMEKPDVD----HIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFA----- 113 F E P E LS + ++Q RS + D +R LFA Sbjct: 838 HFGKATETPGAHTSLLGAEQLSDMVFVDQSPIGKTARSNPVSYVGAWDAIRELFAGAALS 897 Query: 114 ------------RVGEPRCPDHDVPLAAQTVSQMVDNV---LSQPEGKRL--MLLAPIIK 156 G+ RCP Q + +V +GKR +L + Sbjct: 898 RERSYTAAKFSFNSGDGRCPTCGGSGFEHVEMQFLSDVYLRCPDCDGKRYRPEIL-EVTI 956 Query: 157 ERKGEHTKTLENL 169 ERKG H + L Sbjct: 957 ERKGRHVNVADVL 969 Score = 88.9 bits (219), Expect = 9e-16, Method: Composition-based stats. Identities = 56/241 (23%), Positives = 92/241 (38%), Gaps = 25/241 (10%) Query: 593 SGKRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLIND 652 +G + P +R + +++ GAR +NLK++ L + G T +TG SGSGKS+L+ D Sbjct: 69 AGCLECLSPPQRAFTMTQGTIRIRGARQHNLKNLDLDIRTGELTVVTGPSGSGKSSLVFD 128 Query: 653 TLFPIAQRQLNGATIAEPAPYRDIQGLEHFDKV------IDIDQSPIGRTPRSNPATYTG 706 TL+ QR+ A + D DKV I IDQ+ R+ RS T T Sbjct: 129 TLYAEGQRRYVETFSAYARQFLDRMDKPAVDKVEGVPPAIAIDQTNPVRSSRSTVGTMTE 188 Query: 707 VFTPVRELFAGVPE------SRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIY 760 + ++ LF+ + + + R A ++ LP Sbjct: 189 LNDHLKLLFSRAGSLFDKDTALPVQHDTPETIYTTLLQRAAAEGNPRLVLTFPVELPGNA 248 Query: 761 VPCDQCK------GKRYNRETLEIKYKG-KTIHEVLDMTIEEAREFFDAVPALARKLQTL 813 P + + R E G + + +V+ A F AR L+ + Sbjct: 249 TPDEVTQWLSASGFTRVQAEREVSTVNGVRKVLDVV------ADRFRIDGVEKARVLEAI 302 Query: 814 M 814 Sbjct: 303 E 303 Score = 66.2 bits (160), Expect = 6e-09, Method: Composition-based stats. Identities = 28/103 (27%), Positives = 49/103 (47%), Gaps = 18/103 (17%) Query: 403 NRPCASCEGTRLRREARHVYV----ENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEK 458 C C+G R R E V + + + + ++++ A + F+ Sbjct: 936 YLRCPDCDGKRYRPEILEVTIERKGRHVNVADVLELTVSEAADLFS-------------- 981 Query: 459 ILKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQI 501 +E+ L+ +V+VGL Y+ L + TLSGGEAQR++LA + Sbjct: 982 ADREVIRVLQPIVDVGLEYVKLGQPVPTLSGGEAQRLKLAGFL 1024 >UniRef50_A2V167 ABC transporter related n=1 Tax=Shewanella putrefaciens 200 RepID=A2V167_SHEPU Length = 1242 Score = 423 bits (1088), Expect = e-116, Method: Composition-based stats. Identities = 223/943 (23%), Positives = 369/943 (39%), Gaps = 125/943 (13%) Query: 2 DKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYA 61 + I +NLK+++ + ++++VV G+SGSGKS+L + AE R+ + + + Sbjct: 11 EDIFFIDVTQNNLKHLHFKMATNEMVVVVGVSGSGKSTLVNQVIAAEALRQ--QQMRNQS 68 Query: 62 RQFLSLMEKPDVDHIEGLSPAISIEQKS--TSHNPRSTVGTITEIHDYLRLLFARVGEPR 119 + + +P+ L I+I Q+S + N R GT T I++ + F VG+ Sbjct: 69 DKIIHYAVRPEFKTCSSLPSPITISQRSAHIAENIR--FGTRTRINELIVKYFVEVGQIF 126 Query: 120 CPDHDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARI 179 + Q++ + + RL L + + L + Sbjct: 127 HQQ--QSIVKQSLPAIFAHQQRFYVSSRLYLR---VINFELLGANLRHQLVKHNISSLLL 181 Query: 180 DGEVCDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETA--LELSGGTAVVADM 237 E L IE+ + + ++ L L A + Sbjct: 182 RAEGKSTLKATALGKLPAQ-IEMYEGFIAINNAEEAEQLKNISAVPVLMLDSRRVDDASI 240 Query: 238 DDPKAEELLFSANFACPICGYSMRELEPRLFSF---NNPAGACPTCDGLGVQQYFDP-DR 293 D+ +E+ F + R +LFS ++ AG C C+G G Q ++ Sbjct: 241 DEYDHDEIEFDQHGFAKDQRRIFRLPSEKLFSRATQSSTAGYCRQCNGSGEQISYNLGSV 300 Query: 294 VIQNPELSLA----GGAIRGWDRRNFYYFQMLKSLADHYKFDVEAPWGSLSANVHKVVLY 349 +I + L+ G + + L ++ DV + +L A +VL Sbjct: 301 IITDVPLTKEFLNVEKTKAGRYQGFKFLPSGLTTVLKKAGVDVTLSFDALPAVQRDIVLN 360 Query: 350 GSGKENIEFKYMNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASC 409 + S++ + FI+ CASC Sbjct: 361 TLRDKLA---------------------------------SNSKDKFSQTFITKEACASC 387 Query: 410 EGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDRLKF 469 +G+ +AR V V L M+ + N + K A +L ++ LK+ Sbjct: 388 QGSGFGWQARAVRVNGYSLHEYLAMNGKQFHQRINEI-------KTAHPLLTQLKHLLKY 440 Query: 470 LVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLG 529 L + + +++ R TLS GE QR++L + + +++LDEPS L +DN ++G Sbjct: 441 LHALSIEHISFERPLTTLSSGELQRMKLLPALVENVSQRLFILDEPSSNLQFKDNLAIIG 500 Query: 530 TLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTG 589 L ++ GN +++VEH+ AD V+ IGP AG GG+ +E + Sbjct: 501 ILKTIQAKGNGILLVEHNPLYQVYADRVLCIGPKAGAGGGDYCQAPTIEQQLQG------ 554 Query: 590 QYMSGKRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTL 649 + + K P ++ L L +++ L+LP + G SGSGKSTL Sbjct: 555 --------LSISGKIAPTETQERLSLVLQPTRHIQLTQLSLPKNAINTVIGASGSGKSTL 606 Query: 650 INDTLFPIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFT 709 + L+P ++ V +D P S ATY GVF Sbjct: 607 CREMLYPALAQEKYS--------------------VELLDSRPFAGAANSIVATYLGVFD 646 Query: 710 PVRELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKV---EMHFLPDIYVPCDQC 766 +R+ F+ + + YT FSFN GG CE C+G GV+++ + C C Sbjct: 647 ELRQFFSAQSQGQ---YTTNDFSFN-AGGACEHCEGKGVVEIGSGSGSGKDIVKQTCPVC 702 Query: 767 KGKRYNRET----LEIKYKGKTIHEVL--DMTIEEAREFFDAVPALARKLQTLMDVGLTY 820 G R+ E EI K T+ +VL D T + L + TL + L + Sbjct: 703 FGSRFRAEIALFHAEIDKKPVTLPQVLTSDFTW---IASQTDLAKLHTAIATLEVLSLGH 759 Query: 821 IRLGQSATTLSGGEAQRVKLARELSKRGTGQT------------LYILDEPTTGLHFADI 868 + LG+ TLSGGE QR+KLAR L + ILDEP GL + Sbjct: 760 LHLGRETQTLSGGELQRLKLARFLLTHWLNTKSTSKRAADSQQQVVILDEPCRGLDSQAV 819 Query: 869 QQLLDVLHKLRDQGNTIVVIEHNLDVIKTADWIVDLGPEGGSG 911 +L+ +L + T++VIEHN I +D+IVDLG G Sbjct: 820 TRLVGILREHISH-CTLIVIEHNPYFIYQSDYIVDLGRSGEQK 861 Score = 110 bits (276), Expect = 2e-22, Method: Composition-based stats. Identities = 49/168 (29%), Positives = 88/168 (52%), Gaps = 8/168 (4%) Query: 763 CDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAVP-------ALARKLQTLMD 815 C C+G + + ++ G ++HE L M ++ + + + L L+ L Sbjct: 384 CASCQGSGFGWQARAVRVNGYSLHEYLAMNGKQFHQRINEIKTAHPLLTQLKHLLKYLHA 443 Query: 816 VGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVL 875 + + +I + TTLS GE QR+KL L + + L+ILDEP++ L F D ++ +L Sbjct: 444 LSIEHISFERPLTTLSSGELQRMKLLPALVENVSQ-RLFILDEPSSNLQFKDNLAIIGIL 502 Query: 876 HKLRDQGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPET 923 ++ +GN I+++EHN AD ++ +GP+ G+GGG+ + T E Sbjct: 503 KTIQAKGNGILLVEHNPLYQVYADRVLCIGPKAGAGGGDYCQAPTIEQ 550 Score = 76.6 bits (187), Expect = 4e-12, Method: Composition-based stats. Identities = 43/248 (17%), Positives = 81/248 (32%), Gaps = 23/248 (9%) Query: 172 QGYIRARIDGEVCDLSDPPKLELQKKHTIEVVV---DRFKVRDDLTQRLA-ESFETALEL 227 QGY + + L K+ L ++ I + D + +D +A E+ +A Sbjct: 991 QGY---FYNPFMRQLERYSKVPLSERKKILATIPSEDILRQENDWQSLVATENVASAYLQ 1047 Query: 228 SGGTAVVADMDDP--KAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGV 285 G ++ D + L S + + PR F+FN AC C+G G Sbjct: 1048 GAGVVIIRDRAEKLSYHSVRLLSLK------EEVVDRVFPRQFAFNLYKNACQHCNGYGK 1101 Query: 286 QQYFDPDRVIQNPELSLAGGAIRGWDRRNFYYFQMLKSLADHYK-FDVEAPWGSLSANVH 344 + I + S+ + + + + FD P LS Sbjct: 1102 ILSYPLQEWI-DGTKSILDKGSLPFSLGKSLSKRNINHFSQKEGLFDFSKPIQMLSQVER 1160 Query: 345 KVVLYGSGKENIEFKYMNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNR 404 ++ YG + F+ N + + + +EG+ + Y + + + Sbjct: 1161 NILFYG--FKAYRFQKPNAKSMADHQYYEWEGLNSYI---YDNRKQLSSSRLFVDEVDWV 1215 Query: 405 PCASC-EG 411 C C G Sbjct: 1216 DCPFCIHG 1223 >UniRef50_C9RLN7 ABC transporter related protein n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RLN7_FIBSS Length = 840 Score = 398 bits (1023), Expect = e-109, Method: Composition-based stats. Identities = 170/510 (33%), Positives = 270/510 (52%), Gaps = 22/510 (4%) Query: 402 SNRPCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILK 461 N C C G RL++ + V++ I E + + + + + Sbjct: 349 ENAECPHCHGLRLKKTYLNATVDDVSYKQILTTEFAELPELLHKI-FDNKIGQNLKATFN 407 Query: 462 EIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQ 521 + DR++ + ++G+ YLT R+ +TLSGGE QR++LAS L G++ LDEP+ GLH Sbjct: 408 SLLDRIEAINDLGIGYLTPGRAGQTLSGGELQRLKLASLSTGHLNGLLIALDEPASGLHA 467 Query: 522 RDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIM 581 D L L +R GNT++++EH+ I+ AD++I++GPGAG GGE++ +G + ++ Sbjct: 468 SDVSALWKVLEKIRKRGNTLVLIEHNPQIIKRADYIIEMGPGAGEKGGEILFQGTRDEVL 527 Query: 582 AVPESLTGQYMSGKRKIEVPKKR----VPANPEKVLKLTGARGNNLKDVTLTLPVGLFTC 637 PES TG ++ + R + + + ++ V P+ F+ Sbjct: 528 ENPESPTGMWIKAVGSRKSEVGRNVECHCEEKSQAILVKNFAKFDMAPVNAAFPINKFSV 587 Query: 638 ITGVSGSGKSTLINDTLFPIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTP 697 ITG SGSGKSTL+ + + A+ + D + + + Sbjct: 588 ITGQSGSGKSTLLFENIAKRAKAEEFKKL--------------GIDALSILTTGDFHGSK 633 Query: 698 RSNPATYTGVFTPVRELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLP 757 RS + G+ T +R+LFA +PES+ RGYT +FS + GGRCE C+G+GVI + + Sbjct: 634 RSTVLSAIGLTTLLRDLFAKLPESKVRGYTASKFSMHAPGGRCENCKGEGVIYDPLGY-- 691 Query: 758 DIYVPCDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVG 817 C C GKR+ E LEI++K +I ++LDM I A + F + A KL+ L+D G Sbjct: 692 -EESECPVCLGKRFRDEVLEIRFKSLSIADILDMEIGSAYKLFTNMKPFAEKLKPLVDTG 750 Query: 818 LTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHK 877 L Y+RLGQ+ LSGGE R++L+ L++ TL++ DEP GLH DIQQLL ++H Sbjct: 751 LDYLRLGQTTAHLSGGERARLRLSITLARAKAPNTLFLFDEPARGLHQKDIQQLLGLIHG 810 Query: 878 LRDQGNTIVVIEHNLDVIKTADWIVDLGPE 907 L + G+T++ IEH D + AD++V+L Sbjct: 811 LCNAGHTVIAIEHAQDFVDAADYVVELKRG 840 Score = 235 bits (600), Expect = 6e-60, Method: Composition-based stats. Identities = 91/332 (27%), Positives = 142/332 (42%), Gaps = 42/332 (12%) Query: 1 MDKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAY 60 +D I +RG R HNLKN++ P K+ VV G SG GKS+L DTL+ E +RRY+E+LS + Sbjct: 2 LDYISIRGCRLHNLKNVDAQFPLGKITVVCGPSGCGKSTLVMDTLHGESKRRYLETLSPF 61 Query: 61 ARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRC 120 A L +D EGL +++I +++ +I E + LR LFA +P C Sbjct: 62 AADLLGGKRSIPLDSAEGLPASLAIAATRGEAPAKASALSIAECDNALRTLFAAFAKPAC 121 Query: 121 PDHDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKE----------------------- 157 P P+ +Q+ +++ P G +L LA I Sbjct: 122 PICGAPMVSQSREEIIRETAGMPIGTKLQFLAKIETGNAEMATPQQVRGDINADRNDKKK 181 Query: 158 ----RKGEHTKTLENLASQGYIRARIDGEVCDLSDPPKLELQ-KKHTIEVVVDRFKVRDD 212 + K +QG+ RA DG + L+D E ++VDR VR++ Sbjct: 182 AQSKSRTTLDKLSAVFLAQGFTRAIADGTMYSLADLLPGEKVLTPKEFFIIVDRIIVREN 241 Query: 213 LTQRLAESFETALELSGGTAVVADMDDPKAEELLFSANFACPI----------CGYSMRE 262 R+AE+ + L+L+ + D E +S CP ++ Sbjct: 242 TRTRIAEAVDGTLKLTHSAITL----DIAGERKFYSTKPCCPNASDEQHQSQKSNETVAS 297 Query: 263 LEPRLFSFNNPAGACPTCDGLGVQQYFDPDRV 294 L+ R FS + C C G G+ Q P ++ Sbjct: 298 LDARAFSPYSRTSVCEYCYGTGIIQEAAPAKI 329 Score = 165 bits (418), Expect = 7e-39, Method: Composition-based stats. Identities = 78/245 (31%), Positives = 113/245 (46%), Gaps = 32/245 (13%) Query: 726 YTPGRFSFNVRGGRCEACQGDGVIK------------------VEMHFLPDIYVPCDQCK 767 FS R CE C G G+I+ + D C C Sbjct: 298 LDARAFSPYSRTSVCEYCYGTGIIQEAAPAKINEKGGGKGRAESNVESDEDENAECPHCH 357 Query: 768 GKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAV-------------PALARKLQTLM 814 G R + L + ++L E E + +L +++ + Sbjct: 358 GLRLKKTYLNATVDDVSYKQILTTEFAELPELLHKIFDNKIGQNLKATFNSLLDRIEAIN 417 Query: 815 DVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDV 874 D+G+ Y+ G++ TLSGGE QR+KLA LS L LDEP +GLH +D+ L V Sbjct: 418 DLGIGYLTPGRAGQTLSGGELQRLKLAS-LSTGHLNGLLIALDEPASGLHASDVSALWKV 476 Query: 875 LHKLRDQGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTAR 934 L K+R +GNT+V+IEHN +IK AD+I+++GP G GGEIL GT + V E S T Sbjct: 477 LEKIRKRGNTLVLIEHNPQIIKRADYIIEMGPGAGEKGGEILFQGTRDEVLENPESPTGM 536 Query: 935 FLKPM 939 ++K + Sbjct: 537 WIKAV 541 Score = 123 bits (309), Expect = 3e-26, Method: Composition-based stats. Identities = 56/165 (33%), Positives = 88/165 (53%), Gaps = 15/165 (9%) Query: 400 FISNRPCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKI 459 C C G R R E + ++ + I DM IG A + F N+K Sbjct: 690 GYEESECPVCLGKRFRDEVLEIRFKSLSIADILDMEIGSAYKLFTNMKP----------- 738 Query: 460 LKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVG-VMYVLDEPSIG 518 ++LK LV+ GL+YL L ++ LSGGE R+RL+ + +++ DEP+ G Sbjct: 739 ---FAEKLKPLVDTGLDYLRLGQTTAHLSGGERARLRLSITLARAKAPNTLFLFDEPARG 795 Query: 519 LHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPG 563 LHQ+D ++LLG + L + G+TVI +EH +D + AAD+V+++ G Sbjct: 796 LHQKDIQQLLGLIHGLCNAGHTVIAIEHAQDFVDAADYVVELKRG 840 Score = 58.1 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 22/64 (34%), Positives = 32/64 (50%) Query: 609 PEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIA 668 + + G R +NLK+V P+G T + G SG GKSTL+ DTL ++R+ Sbjct: 1 MLDYISIRGCRLHNLKNVDAQFPLGKITVVCGPSGCGKSTLVMDTLHGESKRRYLETLSP 60 Query: 669 EPAP 672 A Sbjct: 61 FAAD 64 Score = 53.8 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 35/162 (21%), Positives = 56/162 (34%), Gaps = 37/162 (22%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 63 I V+ ++ +N P +K V+TG SGSGKS+L F+ + + + L Sbjct: 563 ILVKNFAKFDMAPVNAAFPINKFSVITGQSGSGKSTLLFENIAKRAKAEEFKKL------ 616 Query: 64 FLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEP----- 118 I+ LS + + RSTV + + LR LFA++ E Sbjct: 617 -----------GIDALS---ILTTGDFHGSKRSTVLSAIGLTTLLRDLFAKLPESKVRGY 662 Query: 119 ------------RCPDHDVPLAAQTVSQMVDNVLSQPEGKRL 148 RC + ++ GKR Sbjct: 663 TASKFSMHAPGGRCENCKGEGVIYDPLGYEESECPVCLGKRF 704 >UniRef50_Q92AV6 Lin1813 protein n=1 Tax=Listeria innocua RepID=Q92AV6_LISIN Length = 620 Score = 373 bits (957), Expect = e-101, Method: Composition-based stats. Identities = 168/562 (29%), Positives = 275/562 (48%), Gaps = 36/562 (6%) Query: 226 ELSGGTAVVADMDDPKAEELLFSANFACPICGYSM----RELEPRLFSFNNPAGACPTCD 281 S + V + L AN S ++ P +FS+ +P G C C Sbjct: 86 RQSNPRSTVGSKTGLLNKFCLLFANEGSYQDSESFSLANDDINPDIFSYLSPNGMCFDCA 145 Query: 282 GLGVQQYFDPDRVIQNPELSLAGGAIRGWDRRNFYYFQMLKSLADHYKFDVEAPWGSLSA 341 G G Q + + +I + +++ + + Y +L+ Y + + Sbjct: 146 GTGKQFHIHMENIISSKTVTVEQVFQQIGSTKG--YLNLLQRKYTAYF---HEAFSNCPI 200 Query: 342 NVHKVVLYGSGKENIEFKYMNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFI 401 + ++YG N G TS + + RY E ++ +F Sbjct: 201 EIQNELIYGVVD--------NYSGKTSYC------IERVLHNRYLRNE------DVQRFY 240 Query: 402 SNRPCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILK 461 S C SC G R+ EAR + + N L I+ MS+ EF +N + + ++ + Sbjct: 241 SQEICESCNGYRICDEARMMKIANLHLGEIASMSLIKVKEFLDNYIEMNKLSAFGTELSR 300 Query: 462 EIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQ 521 + L L+++ L +LT+ R TLSGGE QRI L + + L ++YV DEP+ GLH+ Sbjct: 301 SLITTLNSLIHIKLGHLTMYREIPTLSGGELQRIFLYDHLESKLDSLIYVFDEPTSGLHE 360 Query: 522 RDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIM 581 + + ++ +L ++ GNTV++V HD+ I+AADH+ID+G AG GGE+V +G + Sbjct: 361 SEKQEIIESLQSIKAHGNTVLIVSHDKKIIKAADHIIDVGTNAGDLGGEIVYQGSYSEFL 420 Query: 582 AVPESLTGQYMSGKRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGV 641 SLT +++ K+ + L ++ A NNLK++++ +P+ I GV Sbjct: 421 NNRHSLTSKFLDYDMTKSF--KKNKQKTKDTLSISNANRNNLKNISIEIPINRLVGIAGV 478 Query: 642 SGSGKSTLINDTLFPIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNP 701 SGSGKSTLI+ TL P+ + QL + + P +I+G++ K+I+I Q+PIGR SNP Sbjct: 479 SGSGKSTLISKTLVPLCKEQLKNSDFSNP----NIKGMDKIQKIIEISQAPIGRKANSNP 534 Query: 702 ATYTGVFTPVRELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYV 761 TY G++ +RELFA P++ G G FSFN G C +C+G GV + + + Sbjct: 535 VTYIGLWDKIRELFAKQPQAVKEGLKAGDFSFNSNGA-CLSCKGSGVEDISIGYDIQFSK 593 Query: 762 PCDQCKGKRYNRETLEIKYKGK 783 C +C G R+N +TL++ YK K Sbjct: 594 TCPECNGTRFNSKTLQVLYKKK 615 Score = 145 bits (366), Expect = 8e-33, Method: Composition-based stats. Identities = 67/268 (25%), Positives = 118/268 (44%), Gaps = 18/268 (6%) Query: 685 VIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESRARGYTPGRF-SFNVRGGRC-EA 742 V + Q IG T E F+ P G +++ + C E Sbjct: 166 VEQVFQQ-IGSTKGYLNLLQRKYTAYFHEAFSNCPIEIQNELIYGVVDNYSGKTSYCIER 224 Query: 743 CQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDA 802 + ++ E C+ C G R E +K + E+ M++ + +EF D Sbjct: 225 VLHNRYLRNEDVQRFYSQEICESCNGYRICDEARMMKIANLHLGEIASMSLIKVKEFLDN 284 Query: 803 VPALAR--------------KLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRG 848 + + L +L+ + L ++ + + TLSGGE QR+ L L + Sbjct: 285 YIEMNKLSAFGTELSRSLITTLNSLIHIKLGHLTMYREIPTLSGGELQRIFLYDHL-ESK 343 Query: 849 TGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADWIVDLGPEG 908 +Y+ DEPT+GLH ++ Q++++ L ++ GNT++++ H+ +IK AD I+D+G Sbjct: 344 LDSLIYVFDEPTSGLHESEKQEIIESLQSIKAHGNTVLIVSHDKKIIKAADHIIDVGTNA 403 Query: 909 GSGGGEILVSGTPETVAECEASHTARFL 936 G GGEI+ G+ S T++FL Sbjct: 404 GDLGGEIVYQGSYSEFLNNRHSLTSKFL 431 Score = 140 bits (352), Expect = 3e-31, Method: Composition-based stats. Identities = 50/118 (42%), Positives = 75/118 (63%), Gaps = 6/118 (5%) Query: 1 MDKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAY 60 MD I++ A +NLKNI++ IP++K IV+TG+SGSGKSSLAFD ++ EG+++Y++S+ Sbjct: 1 MDYIQIENAYINNLKNISIEIPKNKFIVITGISGSGKSSLAFDLIFEEGRKKYLQSIGMA 60 Query: 61 ARQFLSLMEKPDVDHIEGLSPAISIEQKSTSH-NPRSTVGTITEIHDYLRLLFARVGE 117 +I GLSP ++++Q NPRSTVG+ T + + LLFA G Sbjct: 61 L-----DFGTDYYTNITGLSPTVAVKQNLIRQSNPRSTVGSKTGLLNKFCLLFANEGS 113 Score = 88.9 bits (219), Expect = 8e-16, Method: Composition-based stats. Identities = 36/166 (21%), Positives = 60/166 (36%), Gaps = 29/166 (17%) Query: 2 DKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYA 61 D + + A +NLKNI++ IP ++L+ + G+SGSGKS+L TL + + S Sbjct: 448 DTLSISNANRNNLKNISIEIPINRLVGIAGVSGSGKSTLISKTLVPLCKEQLKNS----- 502 Query: 62 RQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPR-- 119 P++ ++ + I I Q S T + D +R LFA+ + Sbjct: 503 -----DFSNPNIKGMDKIQKIIEISQAPIGRKANSNPVTYIGLWDKIRELFAKQPQAVKE 557 Query: 120 -----------------CPDHDVPLAAQTVSQMVDNVLSQPEGKRL 148 C V + + G R Sbjct: 558 GLKAGDFSFNSNGACLSCKGSGVEDISIGYDIQFSKTCPECNGTRF 603 Score = 70.4 bits (171), Expect = 3e-10, Method: Composition-based stats. Identities = 39/154 (25%), Positives = 64/154 (41%), Gaps = 11/154 (7%) Query: 611 KVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGAT-IAE 669 +++ A NNLK++++ +P F ITG+SGSGKS+L D +F +++ + +A Sbjct: 2 DYIQIENAYINNLKNISIEIPKNKFIVITGISGSGKSSLAFDLIFEEGRKKYLQSIGMAL 61 Query: 670 PAPYRDIQGLEHFDKVIDIDQSPIG-RTPRSNPATYTGVFTPVRELFAGVPESRARG--- 725 + + + Q+ I PRS + TG+ LFA + Sbjct: 62 DFGTDYYTNITGLSPTVAVKQNLIRQSNPRSTVGSKTGLLNKFCLLFANEGSYQDSESFS 121 Query: 726 -----YTPGRFSFNVRGGRCEACQGDG-VIKVEM 753 P FS+ G C C G G + M Sbjct: 122 LANDDINPDIFSYLSPNGMCFDCAGTGKQFHIHM 155 >UniRef50_C6CND4 ABC transporter related n=1 Tax=Dickeya zeae Ech1591 RepID=C6CND4_DICZE Length = 711 Score = 356 bits (913), Expect = 3e-96, Method: Composition-based stats. Identities = 166/660 (25%), Positives = 271/660 (41%), Gaps = 79/660 (11%) Query: 263 LEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPELSLAGGAIRGWDRR--NFYYFQM 320 + N ACP C GLG D D +I N L W YY Q+ Sbjct: 115 PDYHQLKLNKYENACPHCRGLGETHEVDEDELI-NEGCRLDEKPFSCWKNGELADYYNQL 173 Query: 321 LKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKENIEFKYMNDRGDTSIRRHPFEGVLHN 380 L + + + SL+ +LYG+ +E I F+ +G RR ++GV+ Sbjct: 174 LLAYCQRKNINTSKSFSSLNQEEKNALLYGNSEEKITFR-CKHKGKIKQRRAFYKGVILY 232 Query: 381 MERRYKETESSAVREELAKFISNRPCASCEGTRLRREARHVYVENTPLPAISDMSIGHAM 440 + V + +K+ C C+G+R+ ++ + V + + Sbjct: 233 A--------NENVSRKQSKYQKETTCYFCKGSRVNQKTAQLDVIGLTFENFLSLPVSKLC 284 Query: 441 EFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQ 500 E E I + L + N+GL YL LSRS +LSGGE Q++ + Sbjct: 285 EVIKE--------ACEESI---LLRVLSSIDNIGLGYLNLSRSIPSLSGGELQKLMFSRL 333 Query: 501 IGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDI 560 + + + G++ V+DE S ++ D +L + L + NT+++ EH++ I AD I Sbjct: 334 LTSNISGILIVIDEISSQVNPIDYPDILSKIKKLSEK-NTLVLTEHNQCFIDNADVSFHI 392 Query: 561 GPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEVPKKRVPANPEKVLKLTGARG 620 G AG GGE+ + +P K Sbjct: 393 GKQAGSAGGEICQ--------------------PEVIQALPNKNNRNKISDFFHFEDLNK 432 Query: 621 NNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAEPAPYRDIQGLE 680 NN+ + ++ +P T I + + L A Sbjct: 433 NNIINQSVKIPKECVT-------------IFSGISGSGKSSLAKAICEAT---------- 469 Query: 681 HFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESRARGYTPGRFSFNVRGGRC 740 + I + Q T RS+ A+ T + + E F+ G + G F + GG C Sbjct: 470 ---ESIYVSQKSPSYTGRSSVASITELNKIIAEYFSQK-----TGLSAGYFLPHKEGG-C 520 Query: 741 EACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIK--YKGKTIHEVLDMTIEEARE 798 +AC G G+IK+E F DIY+PCD C G ++ + E+ G I EV D +++ Sbjct: 521 KACNGTGIIKLERGFEKDIYIPCDTCNGSLFDPDVSEVTTPVNGMNIVEVYDAELKDIST 580 Query: 799 FFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDE 858 FF + + L T+ +GL++++L + +LSGGE +R+KL LSK L +DE Sbjct: 581 FFQDDK-INQILSTIAALGLSHLKLNRKTQSLSGGEMRRIKLCEILSKTRKTSKLLFIDE 639 Query: 859 PTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVS 918 PT GL ++L+ +++ N IV+IEH + AD+ V +GP G GG++L Sbjct: 640 PTAGLDPETASKVLNFIYRKAGLFNAIVIIEHRPEAEDYADFKVSIGPCAGEQGGKVLAQ 699 Score = 118 bits (296), Expect = 1e-24, Method: Composition-based stats. Identities = 49/148 (33%), Positives = 71/148 (47%), Gaps = 19/148 (12%) Query: 1 MDKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAY 60 M I +G THNLKNI++ IP +K+ V+ G SG+GKSSLAF ++Y + + S Y Sbjct: 1 MKNIIFKGMETHNLKNISINIPLNKVTVIYGRSGAGKSSLAFSSIYQLCKDEFDAVESGY 60 Query: 61 ARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPR- 119 + S + D D GL PA++I Q++T+ NPRST+ + I L L A+ Sbjct: 61 LNE--SNYKIADYD---GLIPAVAIPQRNTNTNPRSTIYSYLNIPQALYSLKAKYNSSIP 115 Query: 120 -------------CPDHDVPLAAQTVSQ 134 CP V + Sbjct: 116 DYHQLKLNKYENACPHCRGLGETHEVDE 143 Score = 65.8 bits (159), Expect = 8e-09, Method: Composition-based stats. Identities = 29/137 (21%), Positives = 52/137 (37%), Gaps = 4/137 (2%) Query: 615 LTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAEPAPYR 674 G +NLK++++ +P+ T I G SG+GKS+L +++ + + + + Sbjct: 6 FKGMETHNLKNISINIPLNKVTVIYGRSGAGKSSLAFSSIYQLCKDEFDAVESGYLNESN 65 Query: 675 D-IQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESRARGYTPGRFSF 733 I + + I Q PRS +Y + + L A S + Sbjct: 66 YKIADYDGLIPAVAIPQRNTNTNPRSTIYSYLNIPQALYSLKAKYNSSIP---DYHQLKL 122 Query: 734 NVRGGRCEACQGDGVIK 750 N C C+G G Sbjct: 123 NKYENACPHCRGLGETH 139 >UniRef50_C1ZCR5 Excinuclease ATPase subunit n=1 Tax=Planctomyces limnophilus DSM 3776 RepID=C1ZCR5_PLALI Length = 844 Score = 345 bits (886), Expect = 4e-93, Method: Composition-based stats. Identities = 160/489 (32%), Positives = 236/489 (48%), Gaps = 24/489 (4%) Query: 441 EFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQ 500 E+F + + + + + R+++ +GL++L L RS LSG E +R RL Sbjct: 379 EYFASGSFEETSNLRDQSLWEHVLQRIEWCRRLGLDHLPLFRSVSGLSGTEYRRARLIPL 438 Query: 501 IGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDI 560 + AGLV +Y+LDEP GL + +L + L GN++++VEH A + A+ VI++ Sbjct: 439 LSAGLVNTLYILDEPLAGLDDQTACIVLDAIQSLLKSGNSLLMVEHHPLAKKRANFVIEM 498 Query: 561 GPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEVPKKRVPANPEKVLKLTGARG 620 GPGAG GG +V G Q ++++ RV P + Sbjct: 499 GPGAGSEGGRIVYAGS--------SPAPTQPWPEHDQVKLTAPRVLREPAGWIDPGPINL 550 Query: 621 NNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAEPAPYRDIQGLE 680 NL+ LP+GL +TG GSGKS + D L P + A P Sbjct: 551 KNLQQFQWKLPLGLLCVVTGPHGSGKSAALIDALQPTSHGDTLPALAGHP---------- 600 Query: 681 HFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESRARGYTPGRFSFNVRG-GR 739 + +D SP+ P +F VR LF PE++ R T FS +V GR Sbjct: 601 ----LWMVDSSPLKGQPSQMLIGLLDLFGEVRALFGQTPEAKNRQLTARFFSLHVAQSGR 656 Query: 740 CEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREF 799 C C+G G I ++ F + + C C GKRY R+ LEI+Y+G I E LD+T+ EA + Sbjct: 657 CSQCKGTGQISADLTFFNEASMTCPNCHGKRYRRDALEIRYRGLNIAEALDLTVAEALTY 716 Query: 800 FDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEP 859 F L L TL GL Y+RLGQ+ +LSGGE QR+KLA L + ++I DEP Sbjct: 717 FKGHHKLQSMLTTLSRTGLRYLRLGQTLKSLSGGERQRIKLALALGQPVEN-GIFICDEP 775 Query: 860 TTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSG 919 T GLH D QL+ +L G+T+ + + + + ADW++ LG + E+L SG Sbjct: 776 TMGLHDQDAHQLMHAFLELVSIGHTVWLADIHPVALSWADWVIQLGSQTPLTLPEVLFSG 835 Query: 920 TPETVAECE 928 T + E Sbjct: 836 PATTFRQSE 844 Score = 197 bits (500), Expect = 2e-48, Method: Composition-based stats. Identities = 86/313 (27%), Positives = 136/313 (43%), Gaps = 52/313 (16%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 63 I +R HNL+ +++ IP +L+VV+G+SGSGKSSLAFDTL+AEGQR Y+E+ S RQ Sbjct: 6 ILIRNLYVHNLQGVDIEIPLQQLVVVSGVSGSGKSSLAFDTLFAEGQRSYIETFSLATRQ 65 Query: 64 FLSLMEKPDVDHIEGLSPAISIEQ-KSTSHNPRS------TVGTITEIHDYLRLLFARVG 116 L E+P VD +E + P I++ Q T RS G++T I D+L+LLF R G Sbjct: 66 LLEKFERPAVDRLENIPPTIALRQLAQTGDKSRSQYVDAQNFGSVTSIADHLKLLFLRCG 125 Query: 117 EPRCPDHDVPLAAQTVSQMVDNVLSQPEGKRLML-------------------------- 150 CP + + + +++ + P+G R+++ Sbjct: 126 SVICPTCQRKITSSSPAEVAQRLAKLPQGTRILVTMKVPEKSALQLSFDSQTAGPSRNST 185 Query: 151 --LAPIIKERKGEHTKTLENLASQGYIRARIDGEVCD---LSDPPKLELQKKHT-IEVVV 204 AP + H +E L QG+ R E ++ +L + + V+V Sbjct: 186 KRTAPPRLPTEKAHQALIEELRQQGFRRGLFQTEALSENFVTHEFSKDLPQHFELVAVIV 245 Query: 205 DRFKVRDDLTQRLAESFETALELSGGTA-------------VVADMDDPKAEELLFSANF 251 DR +R+ ES ETA+ G + +D F+ + Sbjct: 246 DRLIAGSQTIERMLESCETAMRYGAGAIGLWAQTPLPESAYLACTIDGQAWYRHEFNTRY 305 Query: 252 ACPICGYSMRELE 264 C C + + Sbjct: 306 RCEPCQRDFPKPQ 318 Score = 128 bits (323), Expect = 7e-28, Method: Composition-based stats. Identities = 50/183 (27%), Positives = 87/183 (47%), Gaps = 14/183 (7%) Query: 402 SNRPCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILK 461 ++ C +C G R RR+A + + D+++ A+ +F Sbjct: 676 ASMTCPNCHGKRYRRDALEIRYRGLNIAEALDLTVAEALTYFKG--------------HH 721 Query: 462 EIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQ 521 ++ L L GL YL L ++ ++LSGGE QRI+LA +G + +++ DEP++GLH Sbjct: 722 KLQSMLTTLSRTGLRYLRLGQTLKSLSGGERQRIKLALALGQPVENGIFICDEPTMGLHD 781 Query: 522 RDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIM 581 +D +L+ + L +G+TV + + A+ AD VI +G + EV+ GP Sbjct: 782 QDAHQLMHAFLELVSIGHTVWLADIHPVALSWADWVIQLGSQTPLTLPEVLFSGPATTFR 841 Query: 582 AVP 584 Sbjct: 842 QSE 844 >UniRef50_B3SEI3 Putative uncharacterized protein (Fragment) n=1 Tax=Trichoplax adhaerens RepID=B3SEI3_TRIAD Length = 1063 Score = 345 bits (885), Expect = 5e-93, Method: Composition-based stats. Identities = 151/381 (39%), Positives = 227/381 (59%), Gaps = 36/381 (9%) Query: 206 RFKVRDDLTQRLAESFETALELSGGTAVVAD---------MDDPKAEELLFSANFACPIC 256 R K+ D+ R+ +S E L++S G V D + + L+FS F+CPI Sbjct: 272 RVKIDDNSRDRIVDSVENILKISKGLLYVEIKSIPKDCSSPDIEEGKVLIFSEKFSCPIS 331 Query: 257 GYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPELSLAGGAIRGWDRRNFY 316 G+S+ E+EPR+FSFN+P GACP C+GLG + FDP +I + L+L GAI W +++ Sbjct: 332 GFSLTEIEPRIFSFNSPYGACPKCNGLGKEMSFDPQLIIPDKTLTLLEGAIAPWKKKHSK 391 Query: 317 YFQ--------MLKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKENIEFKYMNDRGDTS 368 Y +L +LA HY FD+ P+ L ++ +++ G+ E+I+F Y + ++ Sbjct: 392 YSNTQYKFYESLLNALAIHYNFDLNTPYEELPNDIKDIIMNGNNGEDIKFSYQDGYRQST 451 Query: 369 IRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGTRLRREARHVYVENTPL 428 + PF+GV+ +E + +TES+ + EELAK+ C+ C+G R+++E+ V + N + Sbjct: 452 V-NQPFKGVIQILEEKLNKTESNYIIEELAKYQIQINCSDCQGFRVKKESLCVKINNLHI 510 Query: 429 PAISDMSIGHAMEFFNNL--KLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTLSRSAET 486 ++ SI A + NL L + I++ ILKEI R+ + T Sbjct: 511 GNVTKFSISDAYSWIKNLKDNLDQTQINISKLILKEIERRI----------------SST 554 Query: 487 LSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEH 546 LSGGE+QRIRLASQIG+ L GV+YVLDEPSIGLHQ DN++L+ +L LRDLGN++IVVEH Sbjct: 555 LSGGESQRIRLASQIGSSLTGVLYVLDEPSIGLHQSDNDKLINSLKELRDLGNSIIVVEH 614 Query: 547 DEDAIRAADHVIDIGPGAGVH 567 DED + +D++IDIG AG Sbjct: 615 DEDTMVQSDYLIDIGKYAGGR 635 Score = 273 bits (697), Expect = 3e-71, Method: Composition-based stats. Identities = 127/189 (67%), Positives = 157/189 (83%) Query: 736 RGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEE 795 GGRCE C+GDG++K+EMHFLPD+YV CD+C GKRYN++TL+IKY GK I ++L+MT++E Sbjct: 632 AGGRCEVCEGDGLLKIEMHFLPDVYVKCDECNGKRYNKDTLQIKYNGKNIADILEMTVDE 691 Query: 796 AREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYI 855 FFD +P + KL+ L VGL YI +GQSATTLSGGEAQRVKLA+ELSK+ TG+TLYI Sbjct: 692 GIIFFDKIPLINDKLKALNSVGLGYISIGQSATTLSGGEAQRVKLAKELSKKSTGRTLYI 751 Query: 856 LDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEI 915 LDEPTTGLH DIQ LL VLH+L D GNT++VIEHNLDVIKTAD+I+D+GP+G GGE+ Sbjct: 752 LDEPTTGLHSHDIQNLLQVLHELVDMGNTVIVIEHNLDVIKTADYIIDIGPKGDIKGGEV 811 Query: 916 LVSGTPETV 924 + GTPE V Sbjct: 812 VAIGTPEEV 820 Score = 179 bits (453), Expect = 6e-43, Method: Composition-based stats. Identities = 71/179 (39%), Positives = 103/179 (57%), Gaps = 15/179 (8%) Query: 403 NRPCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKE 462 C C G R ++ + + I +M++ + FF+ + L Sbjct: 656 YVKCDECNGKRYNKDTLQIKYNGKNIADILEMTVDEGIIFFDKIPL-------------- 701 Query: 463 IGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGV-MYVLDEPSIGLHQ 521 I D+LK L +VGL Y+++ +SA TLSGGEAQR++LA ++ G +Y+LDEP+ GLH Sbjct: 702 INDKLKALNSVGLGYISIGQSATTLSGGEAQRVKLAKELSKKSTGRTLYILDEPTTGLHS 761 Query: 522 RDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAI 580 D + LL L L D+GNTVIV+EH+ D I+ AD++IDIGP + GGEVVA G E + Sbjct: 762 HDIQNLLQVLHELVDMGNTVIVIEHNLDVIKTADYIIDIGPKGDIKGGEVVAIGTPEEV 820 Score = 117 bits (293), Expect = 2e-24, Method: Composition-based stats. Identities = 51/154 (33%), Positives = 88/154 (57%), Gaps = 1/154 (0%) Query: 758 DIYVPCDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVG 817 I + C C+G R +E+L +K I V +I +A + + + Q + Sbjct: 483 QIQINCSDCQGFRVKKESLCVKINNLHIGNVTKFSISDAYSWIKNLKDNLDQTQINISKL 542 Query: 818 LTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHK 877 + + ++TLSGGE+QR++LA ++ TG LY+LDEP+ GLH +D +L++ L + Sbjct: 543 ILKEIERRISSTLSGGESQRIRLASQIGSSLTG-VLYVLDEPSIGLHQSDNDKLINSLKE 601 Query: 878 LRDQGNTIVVIEHNLDVIKTADWIVDLGPEGGSG 911 LRD GN+I+V+EH+ D + +D+++D+G G Sbjct: 602 LRDLGNSIIVVEHDEDTMVQSDYLIDIGKYAGGR 635 >UniRef50_Q4JUN2 Excinuclease ABC, subunit A n=2 Tax=Corynebacterium jeikeium RepID=Q4JUN2_CORJK Length = 923 Score = 340 bits (872), Expect = 2e-91, Method: Composition-based stats. Identities = 170/405 (41%), Positives = 230/405 (56%), Gaps = 23/405 (5%) Query: 551 IRAADHV-IDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEVPKKRVPANP 609 AD P G GG VA G A + P TG+ + +++ P Sbjct: 521 AAEADRANTSHCPDTGGDGGSDVAGGAGLAGLDCP---TGRAL-AAGPLKLTTDAEARTP 576 Query: 610 EKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAE 669 L LT L + + +G FT ITGVSGSGKSTL++ TL + Q+ Sbjct: 577 SGTLALTDINARTLNSLDVDFGLGTFTAITGVSGSGKSTLLH-TLASSLRDQVKTTVDDG 635 Query: 670 PAPYRDIQGLEH----------------FDKVIDIDQSPIGRTPRSNPATYTGVFTPVRE 713 R E ++++ I Q PIGRTPRS ATYTG+F VR+ Sbjct: 636 EMASRGTSSAEKEGSAETATAELNADIAVNRLVQISQKPIGRTPRSCLATYTGLFDRVRK 695 Query: 714 LFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNR 773 LFA E++ RG+T RFS+NV GRC C G+G I+VE+ FLP Y PC C G RYN Sbjct: 696 LFAQTDEAKRRGWTVSRFSYNVTQGRCPTCSGEGQIEVELVFLPGSYTPCPDCHGARYNA 755 Query: 774 ETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGG 833 ETLE+ + G+TI +VL++T+ EARE F A+AR L+ L VGL Y+RLGQ AT LSGG Sbjct: 756 ETLEVTWNGRTIADVLELTVAEAREVFAEEGAIARALRALSAVGLDYLRLGQPATELSGG 815 Query: 834 EAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLD 893 EAQR+KLA EL + G T+Y++DEPTTGLH AD+ L+ L +L + GNT+VV+EH++ Sbjct: 816 EAQRIKLATELQRAQRGHTVYLMDEPTTGLHPADVDLLMTELQRLVNNGNTVVVVEHDMR 875 Query: 894 VIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLKP 938 V AD ++++GP G+ GG+++ G+P TVA+ + T R L Sbjct: 876 VAAQADRVLEMGPGAGARGGQVVADGSPATVAQT-DTATGRVLAE 919 Score = 306 bits (785), Expect = 2e-81, Method: Composition-based stats. Identities = 101/415 (24%), Positives = 168/415 (40%), Gaps = 36/415 (8%) Query: 220 SFETALELSGGTAVVADMDDPKAEELLFSANFACPICG---YSMRELEPRLFSFNNPAGA 276 + + G + V + + L + G L+ FS N AG Sbjct: 92 ALRQGAQAGGARSTVGTVSNLSNTIRLLYSRCGQYPAGVRERHGGRLDSDSFSPNTTAGM 151 Query: 277 CPTCDGLGVQQYFDPDRVIQNPELSLAGGAIRGWDRRNFYYFQMLKSLADHYKFDVEAPW 336 CP C G GV + ++ +P LS+ GAI W + + + + F ++ PW Sbjct: 152 CPECQGTGVVHEPTEESMVPDPSLSIDEGAIAAW--PGAWLGKNFRDIVAELGFPMDIPW 209 Query: 337 GSLSANVHKVVLYGSGKENIEFKYMNDRGD-TSIRRHPFEGVLHNMERRYKETESSAVRE 395 + +LY + + + V + + ET S + R Sbjct: 210 REIPKADRDWILYTDERPVVTIHPHRGADQIQRTYEGTWRSVASYLRKTLAETGSDSTRR 269 Query: 396 ELAKFISNRPCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQ---- 451 + F+ + C C+G RL +A V P+ ++ + + + F + + Sbjct: 270 RVLSFMKSSRCGVCDGRRLIVDALSVGYLGLPIDSLGALPLEDVLSRFAERRASMPADTA 329 Query: 452 --------------------------RAKIAEKILKEIGDRLKFLVNVGLNYLTLSRSAE 485 A+ +L + L+ +V++GL +L+L R+ Sbjct: 330 RGQADIYATTGRRLAQHAPAGGDSSAAAEAERILLSQAIPTLESVVDLGLGHLSLDRATS 389 Query: 486 TLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVE 545 TLS GE QR+RLASQ+ +GL GV YVLDEPS GLH + ++ + D GN+V++VE Sbjct: 390 TLSAGELQRLRLASQLRSGLFGVAYVLDEPSAGLHPEERRAVMRLIRGFLDAGNSVLLVE 449 Query: 546 HDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEV 600 HD + AD ++D+GPGAG GG+++ GP A T + R Sbjct: 450 HDMHLVAEADWIVDVGPGAGELGGKILYSGPAAPSTATANHNTAANEAPARSSSA 504 Score = 167 bits (423), Expect = 2e-39, Method: Composition-based stats. Identities = 73/268 (27%), Positives = 119/268 (44%), Gaps = 43/268 (16%) Query: 356 IEFKYMNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREE-LAKFI------------- 401 ++ + G+ + + + +T+ + R +++F Sbjct: 668 VQISQKPIGRTPRSCLATYTGLFDRVRKLFAQTDEAKRRGWTVSRFSYNVTQGRCPTCSG 727 Query: 402 -------------SNRPCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKL 448 S PC C G R E V + + ++++ A E F Sbjct: 728 EGQIEVELVFLPGSYTPCPDCHGARYNAETLEVTWNGRTIADVLELTVAEAREVFAE--- 784 Query: 449 AGQRAKIAEKILKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVG- 507 I L+ L VGL+YL L + A LSGGEAQRI+LA+++ G Sbjct: 785 -----------EGAIARALRALSAVGLDYLRLGQPATELSGGEAQRIKLATELQRAQRGH 833 Query: 508 VMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVH 567 +Y++DEP+ GLH D + L+ L L + GNTV+VVEHD AD V+++GPGAG Sbjct: 834 TVYLMDEPTTGLHPADVDLLMTELQRLVNNGNTVVVVEHDMRVAAQADRVLEMGPGAGAR 893 Query: 568 GGEVVAEGPLEAIMAVPESLTGQYMSGK 595 GG+VVA+G + ++ TG+ ++ + Sbjct: 894 GGQVVADGSPATVAQT-DTATGRVLAER 920 Score = 157 bits (397), Expect = 2e-36, Method: Composition-based stats. Identities = 52/114 (45%), Positives = 80/114 (70%) Query: 4 IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 63 I VR A NLK+ ++ +PR+ L+ VTG+SGSGKSSLAF TL+ E QRRY+ES++ +AR+ Sbjct: 12 IRVRDAHLRNLKHQDVSLPRNALVAVTGVSGSGKSSLAFGTLHGEAQRRYLESVAPFARR 71 Query: 64 FLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGE 117 + P V +EGL P +++ Q + + RSTVGT++ + + +RLL++R G+ Sbjct: 72 LIGGAVDPRVGSVEGLPPTVALRQGAQAGGARSTVGTVSNLSNTIRLLYSRCGQ 125 Score = 130 bits (327), Expect = 3e-28, Method: Composition-based stats. Identities = 58/215 (26%), Positives = 98/215 (45%), Gaps = 45/215 (20%) Query: 763 CDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAVPA----------------- 805 C C G+R + L + Y G I + + +E+ F A Sbjct: 280 CGVCDGRRLIVDALSVGYLGLPIDSLGALPLEDVLSRFAERRASMPADTARGQADIYATT 339 Query: 806 -------------------LARKL--------QTLMDVGLTYIRLGQSATTLSGGEAQRV 838 R L ++++D+GL ++ L ++ +TLS GE QR+ Sbjct: 340 GRRLAQHAPAGGDSSAAAEAERILLSQAIPTLESVVDLGLGHLSLDRATSTLSAGELQRL 399 Query: 839 KLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTA 898 +LA +L G Y+LDEP+ GLH + + ++ ++ D GN+++++EH++ ++ A Sbjct: 400 RLASQLRSGLFGVA-YVLDEPSAGLHPEERRAVMRLIRGFLDAGNSVLLVEHDMHLVAEA 458 Query: 899 DWIVDLGPEGGSGGGEILVSGTPETVAECEASHTA 933 DWIVD+GP G GG+IL SG +TA Sbjct: 459 DWIVDVGPGAGELGGKILYSGPAAPSTATANHNTA 493 Score = 78.9 bits (193), Expect = 1e-12, Method: Composition-based stats. Identities = 48/200 (24%), Positives = 77/200 (38%), Gaps = 20/200 (10%) Query: 606 PANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGA 665 P+ ++++ A NLK ++LP +TGVSGSGKS+L TL AQR+ + Sbjct: 5 HLQPDAMIRVRDAHLRNLKHQDVSLPRNALVAVTGVSGSGKSSLAFGTLHGEAQRRYLES 64 Query: 666 TIAE-----PAPYRDIQG-LEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVP 719 G +E + + Q RS T + + +R L++ Sbjct: 65 VAPFARRLIGGAVDPRVGSVEGLPPTVALRQGAQAGGARSTVGTVSNLSNTIRLLYSRCG 124 Query: 720 E----SRARG---YTPGRFSFNVRGGRCEACQGDGVIK--VEMHFLPDIYVPCDQCKGKR 770 + R R FS N G C CQG GV+ E +PD + D+ Sbjct: 125 QYPAGVRERHGGRLDSDSFSPNTTAGMCPECQGTGVVHEPTEESMVPDPSLSIDEGAIAA 184 Query: 771 YNRETLEIKYKGKTIHEVLD 790 + + GK +++ Sbjct: 185 WPG-----AWLGKNFRDIVA 199 Score = 62.7 bits (151), Expect = 6e-08, Method: Composition-based stats. Identities = 32/151 (21%), Positives = 53/151 (35%), Gaps = 28/151 (18%) Query: 3 KIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYAR 62 + + L ++++ +TG+SGSGKS+L TL + + + ++ Sbjct: 579 TLALTDINARTLNSLDVDFGLGTFTAITGVSGSGKSTL-LHTLASSLRDQVKTTVDDGEM 637 Query: 63 QFLSLMEKPDVDHIE----GLSPAIS------IEQKSTSHNPRSTVGTITEIHDYLRLLF 112 E L+ I+ I QK PRS + T T + D +R LF Sbjct: 638 ASRGTSSAEKEGSAETATAELNADIAVNRLVQISQKPIGRTPRSCLATYTGLFDRVRKLF 697 Query: 113 AR-----------------VGEPRCPDHDVP 126 A+ V + RCP Sbjct: 698 AQTDEAKRRGWTVSRFSYNVTQGRCPTCSGE 728 >UniRef50_C9RP94 Excinuclease ATPase subunit-like protein n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RP94_FIBSS Length = 708 Score = 309 bits (791), Expect = 4e-82, Method: Composition-based stats. Identities = 162/649 (24%), Positives = 273/649 (42%), Gaps = 64/649 (9%) Query: 264 EPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPELSLAGGAIRGWDRRNFYYFQMLKS 323 E F N CP C GLG + D +++ + + W+ ++ ML Sbjct: 115 EYGFFVLNKKENVCPVCKGLGFVKRLDQTKIVDVKKKIKDV-PFKPWNTHKDFFSGMLNF 173 Query: 324 LADHYKFDVEAPWGSLSANVHKVVLYGSGKENIEFKYMNDRGDTSIRRHPFEGVLHNMER 383 + D + +G L + K +LYG G + +Y G + R + GV+ + Sbjct: 174 FCEEKHIDCDCEFGKLPFELQKKLLYGEGLKKYSVRYKT-LGRFARRTCRYFGVMTGV-- 230 Query: 384 RYKETESSAVREELAKFISNRPCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFF 443 T S + + S+ C C G + ++ R + V + + + S + +E+ Sbjct: 231 PMLRTSSIS-----ENYYSDFTCEECNGEKYAKKYRELTVCGLSIGEVLNKSFENVVEWA 285 Query: 444 NNLKLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGA 503 + + L R +K+I LK + + L YL L+RS +LSGGE QR+RL + Sbjct: 286 SEVGL---RFPSMMFSVKKIIAFLKKSIELNLAYLNLNRSIPSLSGGELQRLRLVQIFNS 342 Query: 504 GLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPG 563 + + VLDEP GL + + + + +++L+ +T++V++H E+ I+AA +VI +G G Sbjct: 343 QIKNTLVVLDEPLAGLSKTEKDVVEKNILNLKK-NHTILVIDHHENFIKAASNVIALGEG 401 Query: 564 AGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEVPKKRVPANPEKVLKLTGARGNNL 623 G GG++V +Y+ + KR + Sbjct: 402 GGKLGGKLV--------------DYKKYLKSQNVNVAWIKRPVVDVRDYRIDHPIYQ--F 445 Query: 624 KDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAEPAPYRDIQGLEHFD 683 K V + L G I G SG GKS L+ + I FD Sbjct: 446 KGVDVNLAYGRSNLIMGASGIGKSILLREYFPRI------------------------FD 481 Query: 684 KVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESRARGYTPGRFSFNVRG--GRCE 741 K + + Q + S AT VF + LFA + F N+ G G C Sbjct: 482 KYVYVSQKSLVGNSHSFVATVLDVFGEIIGLFAKKYSKK------KTFFSNLVGSEGACP 535 Query: 742 ACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFD 801 C G GVI + ++ C +C G +N E + GK I ++ MTI+EA +FF Sbjct: 536 ECSGSGVIIYNQNRNEEVSFVCAKCMGTGFNTELKKYFINGKNIFDLWQMTIDEAADFFA 595 Query: 802 AVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTT 861 + L+ + L ++ LGQ+ ++LSGGE R+KLA+ +Y +DEP Sbjct: 596 NNAKIEIPLKNAQKLLLGHLTLGQNTSSLSGGENVRIKLAQI---HKISVDVYGIDEPFK 652 Query: 862 GLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADWIVDLGPEGGS 910 GL +I + ++ ++G T+ V++H K D + +L + G Sbjct: 653 GLSKTEIHAVASYINSFVEEGKTVAVVDHEECAEKYFDSLYELINKNGV 701 Score = 109 bits (272), Expect = 6e-22, Method: Composition-based stats. Identities = 37/136 (27%), Positives = 63/136 (46%), Gaps = 17/136 (12%) Query: 2 DKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYA 61 + I V+ T+NLK I++ I ++ + ++ G SGSGKSSLA+DT+ G + S + Sbjct: 3 EDIVVKEISTNNLKGISVHIKKNAINIIVGPSGSGKSSLAYDTIAEIGLQELNSMYSDF- 61 Query: 62 RQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEP--- 118 K V + + ++Q + ++N RST+GT I Y+ +F+ V + Sbjct: 62 ----GGEPKYCVGEYHNILVTVPVKQINNNNNVRSTIGTYFNIVPYVINIFSFVLKKEYG 117 Query: 119 ---------RCPDHDV 125 CP Sbjct: 118 FFVLNKKENVCPVCKG 133 Score = 65.4 bits (158), Expect = 1e-08, Method: Composition-based stats. Identities = 37/137 (27%), Positives = 56/137 (40%), Gaps = 6/137 (4%) Query: 615 LTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAEPAPYR 674 + NNLK +++ + I G SGSGKS+L DT+ I ++LN + Sbjct: 7 VKEISTNNLKGISVHIKKNAINIIVGPSGSGKSSLAYDTIAEIGLQELNSMYSDFGGEPK 66 Query: 675 DIQGLEHFDKV-IDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESRARGYTPGRFSF 733 G H V + + Q RS TY + V +F+ V + G F Sbjct: 67 YCVGEYHNILVTVPVKQINNNNNVRSTIGTYFNIVPYVINIFSFVLKKEY-----GFFVL 121 Query: 734 NVRGGRCEACQGDGVIK 750 N + C C+G G +K Sbjct: 122 NKKENVCPVCKGLGFVK 138 >UniRef50_Q12GF5 ABC transporter related n=28 Tax=Proteobacteria RepID=Q12GF5_POLSJ Length = 554 Score = 265 bits (678), Expect = 6e-69, Method: Composition-based stats. Identities = 100/528 (18%), Positives = 178/528 (33%), Gaps = 94/528 (17%) Query: 417 EARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDR--LKFLVNVG 474 EA+ + + + + + G+ + R L L +VG Sbjct: 92 EAQMRELRGRRIGMVFQEPMTALNPVMRIGEQIGEVFDAHGSVPAAEKRRRILAALADVG 151 Query: 475 LN--YLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLI 532 L L + LSGG+ QR+ +A + L V+ + DEP+ L ++L + Sbjct: 152 LPDPELLIDSYPFRLSGGQRQRVMIACALV--LEPVLLIADEPTTALDVTTQAQILKLVR 209 Query: 533 HLRDL-GNTVIVVEHDEDAI-RAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQ 590 L+ G V+ + HD + ADHV+ + G+VV GP A++ P+ + Sbjct: 210 ELQQRRGTAVLFITHDFGVVSEIADHVVVM------QTGKVVEAGPASAVLRAPQHPYTR 263 Query: 591 YMSGKRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLI 650 + ++ P + + + C SG+G Sbjct: 264 KLIAAIPHGQAQRATPTDDV-----------------VRVLQVQDLCKIYKSGNG----- 301 Query: 651 NDTLFPIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTP 710 LF A+ + G + +S G++ F Sbjct: 302 ---LFKRARSVQAAKDVNFELHRGQTLG--------LVGESGSGKSSVGRCLVGLAPFDS 350 Query: 711 VRELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKR 770 R LF + R + G EA + + +++M F + + Sbjct: 351 GRILF------KGRNLSQG-----------EAFRREAAGRIQMVFQDPYASLNPRHR--- 390 Query: 771 YNRETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTL 830 G I + A+AR ++ L VGL + Sbjct: 391 ----------VGAAIA------GGPIAQGVSKTEAMARAMELLNLVGLGADAAQRYPHEF 434 Query: 831 SGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQ-GNTIVVIE 889 SGG+ QR+ +AR L+ + L + DEP + L + Q+L++ ++R+Q +V I Sbjct: 435 SGGQRQRIGIARALAMQ---PELLVADEPVSALDVSVQAQVLELFAQVREQFQLAMVFIT 491 Query: 890 HNLDVI-KTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFL 936 H+L V + D I + GE++ G V R L Sbjct: 492 HDLRVAGQMCDHIAVMQR------GEVVEYGETHKVLGNPQHAYTRQL 533 Score = 144 bits (364), Expect = 1e-32, Method: Composition-based stats. Identities = 69/326 (21%), Positives = 104/326 (31%), Gaps = 90/326 (27%) Query: 619 RGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAEPAPYRDIQG 678 R ++ TL++ G C+ G SGSGKS + N + Sbjct: 30 RALAVEGATLSVLPGQTLCVVGESGSGKSMIANAVM------------------------ 65 Query: 679 LEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESRARGYTPGRFSFNVRGG 738 G PR A G + E++ R R Sbjct: 66 ---------------GLLPRPQVAPVAGKILFEGVDLLSLTEAQMRELRGRR-------- 102 Query: 739 RCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEARE 798 + M F + + G+ I EV D A Sbjct: 103 ------------IGMVFQEPMTALNPVMRI-------------GEQIGEVFD-----AHG 132 Query: 799 FFDAVPALARKLQTLMDVGLTYIR--LGQSATTLSGGEAQRVKLARELSKRGTGQTLYIL 856 A R L L DVGL + LSGG+ QRV +A L L I Sbjct: 133 SVPAAEKRRRILAALADVGLPDPELLIDSYPFRLSGGQRQRVMIACALV---LEPVLLIA 189 Query: 857 DEPTTGLHFADIQQLLDVLHKLRDQ-GNTIVVIEHNLDVI-KTADWIVDLGPEGGSGGGE 914 DEPTT L Q+L ++ +L+ + G ++ I H+ V+ + AD +V + G+ Sbjct: 190 DEPTTALDVTTQAQILKLVRELQQRRGTAVLFITHDFGVVSEIADHVVVM------QTGK 243 Query: 915 ILVSGTPETVAECEASHTARFLKPML 940 ++ +G V R L + Sbjct: 244 VVEAGPASAVLRAPQHPYTRKLIAAI 269 Score = 120 bits (301), Expect = 3e-25, Method: Composition-based stats. Identities = 55/354 (15%), Positives = 102/354 (28%), Gaps = 50/354 (14%) Query: 283 LGVQQYFDPDRVIQNPELSLAGG-AIRGWDRRNFYYFQMLKSLADHYKFDVEAPWGSLSA 341 GV V+ + G A Y + L + H + P + Sbjct: 226 FGVVSEIADHVVVMQTGKVVEAGPASAVLRAPQHPYTRKLIAAIPHGQAQRATPTDDVVR 285 Query: 342 NVHKVVLYGSGKENIEFK----YMNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREEL 397 VL I + R + + FE LH + ES + + + Sbjct: 286 -----VLQVQDLCKIYKSGNGLFKRARSVQAAKDVNFE--LHRGQTLGLVGESGSGKSSV 338 Query: 398 AKFISNRPCASCEGTRLRR-EARHVYVENTPLPAISDMSIGHAMEFFNNLKLAG-----Q 451 + + L ++ + + L A + Sbjct: 339 GRCLVG----------LAPFDSGRILFKGRNLSQGEAFR-REAAGRIQMVFQDPYASLNP 387 Query: 452 RAKIAEKIL-----------KEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQ 500 R ++ I + + ++ L VGL R SGG+ QRI +A Sbjct: 388 RHRVGAAIAGGPIAQGVSKTEAMARAMELLNLVGLGADAAQRYPHEFSGGQRQRIGIARA 447 Query: 501 IGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLG-NTVIVVEHDEDAI-RAADHVI 558 + + + V DEP L ++L +R+ ++ + HD + DH+ Sbjct: 448 LA--MQPELLVADEPVSALDVSVQAQVLELFAQVREQFQLAMVFITHDLRVAGQMCDHIA 505 Query: 559 DIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEVPKKRVPANPEKV 612 + GEVV G ++ P+ + + + P V Sbjct: 506 VMQR------GEVVEYGETHKVLGNPQHAYTRQLIDAVPRLASPNALDETPAMV 553 >UniRef50_A4EWE8 Oligopeptide/dipeptide uptake family ABC transporter, ATP-binding protein n=3 Tax=Rhodobacterales RepID=A4EWE8_9RHOB Length = 526 Score = 264 bits (674), Expect = 2e-68, Method: Composition-based stats. Identities = 97/527 (18%), Positives = 181/527 (34%), Gaps = 95/527 (18%) Query: 423 VENTPLPAISDMSIGHAMEFFN-NLKLAGQRAKIAEKILKEIGDRLKFLVNVGLN---YL 478 V + I + +L + + R+ L++ Sbjct: 86 VRGNDISFIFQEPMTSLNPLHTIEKQLVESLSLHQGLVGAAARARVLELLDKVGIRDAET 145 Query: 479 TLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRD-L 537 L LSGG+ QR+ +A + + + DEP+ L ++L L L+ Sbjct: 146 RLGSYPHQLSGGQRQRVMIAMALANK--PEILIADEPTTALDVTIQAQILELLADLKKSE 203 Query: 538 GNTVIVVEHDEDAIR-AADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKR 596 G ++ + HD + +R AD V + GE+V EGP + A P+ Q + Sbjct: 204 GMGLLFITHDLNVVRRIADRVCVM------KNGEIVEEGPAAEVFANPQHAYTQKLLAAE 257 Query: 597 KIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFP 656 P+ E V KD+ + P+ Sbjct: 258 PSGAPEPVADEAAEMV---------ATKDLKVWFPIEK---------------------G 287 Query: 657 IAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFA 716 + +R + P+ G + + + +S G+T + + L A Sbjct: 288 LLKRTVGHVKAVNPSSINVRAG----ETLGIVGESGSGKTT---------MALAIMRLIA 334 Query: 717 GVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETL 776 E R +G ++S ++ +M V D Sbjct: 335 SEGEVRFQGQDLRQWSTRD----------LRSLRKDMQI-----VFQDPFGSLSPRMTCA 379 Query: 777 EIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQ 836 +I +G IH+V P + + +VGL + + SGG+ Q Sbjct: 380 QIISEGLAIHDVDQ-----------DRPPRELVAEVMEEVGLDPAAMDRYPHEFSGGQRQ 428 Query: 837 RVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQ-GNTIVVIEHNLDVI 895 R+ +AR + R L +LDEPT+ L Q++++L L+++ G + I H+L+V+ Sbjct: 429 RIAIARAMVLR---PKLVVLDEPTSALDMTVQVQIVELLRGLQERYGLAYLFISHDLNVV 485 Query: 896 K-TADWIVDLGPEGGSGGGEILVSGTPETVAECE-ASHTARFLKPML 940 + + +V + G+I+ SG + + + +T L L Sbjct: 486 RAMSHRVVVMKQ------GDIVESGNAQEIFDAPKEDYTRHLLAAAL 526 Score = 130 bits (326), Expect = 4e-28, Method: Composition-based stats. Identities = 58/339 (17%), Positives = 113/339 (33%), Gaps = 52/339 (15%) Query: 283 LGVQQYFDPDRVIQNPELSLAGG-AIRGWDRRNFYYFQMLKSLADHYKFDVEAPWGSLSA 341 L V + + + G A + Y Q L + A+ P +A Sbjct: 214 LNVVRRIADRVCVMKNGEIVEEGPAAEVFANPQHAYTQKLLA-AEPSGAP--EPVADEAA 270 Query: 342 NVHKVVLYGSGKENIEFKYMNDRGDTSIRRHPFEGVLHN-MERRYKET-----ESSAVRE 395 + ++++ + ++G + V + + R ET ES + + Sbjct: 271 EM-------VATKDLKVWFPIEKGLLKRTVGHVKAVNPSSINVRAGETLGIVGESGSGKT 323 Query: 396 ELAKFISNRPCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKI 455 +A I RL V + L S + + + + Sbjct: 324 TMALAI----------MRLIASEGEVRFQGQDLRQWSTRDLRSLRKDMQIVFQDPFGSLS 373 Query: 456 AEKILKEI-----------GDR------LKFLVNVGLNYLTLSRSAETLSGGEAQRIRLA 498 +I DR + + VGL+ + R SGG+ QRI +A Sbjct: 374 PRMTCAQIISEGLAIHDVDQDRPPRELVAEVMEEVGLDPAAMDRYPHEFSGGQRQRIAIA 433 Query: 499 SQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDL-GNTVIVVEHDEDAIRAADHV 557 + L + VLDEP+ L +++ L L++ G + + HD + +RA H Sbjct: 434 RAMV--LRPKLVVLDEPTSALDMTVQVQIVELLRGLQERYGLAYLFISHDLNVVRAMSHR 491 Query: 558 IDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKR 596 + + + G++V G + I P+ +++ Sbjct: 492 VVV-----MKQGDIVESGNAQEIFDAPKEDYTRHLLAAA 525 Score = 43.4 bits (101), Expect = 0.038, Method: Composition-based stats. Identities = 15/83 (18%), Positives = 30/83 (36%), Gaps = 5/83 (6%) Query: 616 TGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAEPAPYRD 675 G ++ V+ ++ G + G SGSGKS T+ + + ++ Sbjct: 17 DGEITQAVRGVSFSVDRGETVALVGESGSGKSVSALSTVSLLGDSAIVEGSVTYAGTEMV 76 Query: 676 IQGLEHF-----DKVIDIDQSPI 693 +H + + I Q P+ Sbjct: 77 GASEKHLMQVRGNDISFIFQEPM 99 >UniRef50_B9JQ55 Peptide ABC transporter, ATP-binding protein n=1 Tax=Agrobacterium radiobacter K84 RepID=B9JQ55_AGRRK Length = 587 Score = 261 bits (667), Expect = 1e-67, Method: Composition-based stats. Identities = 111/534 (20%), Positives = 181/534 (33%), Gaps = 44/534 (8%) Query: 415 RREARHVYVENTPLPAISDMS---IGHAMEFFNNLKLAGQRAKIAEKILKEIGDRLKFLV 471 AR+ V + + + A++ L R + A + + Sbjct: 78 SPRARN-EVRGKLITYVPQDPSASLNPAIKIGEQLVEGLMRGRDALSPHVAKARMAELMS 136 Query: 472 NVGLN--YLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLG 529 VGL LSR LSGG+ QR+ +A + + ++DEP+ GL +L Sbjct: 137 EVGLAATPEFLSRYPAQLSGGQLQRVAIAMAVA--PRPRLVIMDEPTTGLDVSTQADVLA 194 Query: 530 TLIHL-RDLGNTVIVVEHDEDAIRA-ADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESL 587 + L + G + V HD + AD V+ + + G +V G + A P Sbjct: 195 MMTRLCQAHGIATLYVSHDLAVVAHIADKVMVL------YAGRIVEAGSKGDVFARPAHP 248 Query: 588 TGQYMSGKRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKS 647 + + +++ A L R + P C S KS Sbjct: 249 YTRSLLDAVPSMREARKLRAIDGMAPPLRD-REHGCV-FRARCPHATAVCAVAPPLSSKS 306 Query: 648 TLINDTLFPIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGV 707 ++ A A A I + +V+ + R + Sbjct: 307 AANHEVACHWADEIDGQAKTAPLFVVNRILENDKVLEVLSLS----ARYGDRTVLRDVSM 362 Query: 708 FTPVRELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCK 767 E A V ES G FS + G G I +E L Sbjct: 363 TLSRGECLAVVGES---GSGKTTFSRCMIGL---HSDWKGEIVLEGRRLSQ-SAAHRSPD 415 Query: 768 GKRYNRETLEIKY----KGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRL 823 +R + + Y KTI L + I + D + L V L + Sbjct: 416 DRRKLQYVFQNPYGSLNPRKTIGGNLAVPIG-HFQTSDDQNRDRQIKAALERVELRSAHI 474 Query: 824 GQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGN 883 + LSGGE QRV +AR L + I DE T+ L + ++++L L G Sbjct: 475 DRFPNELSGGEKQRVAIARALL---ASPDVMICDEITSALDVSVQAAIVELLRSLMSDGL 531 Query: 884 TIVVIEHNLDVIK-TADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFL 936 ++V + HNL V++ AD + L GEI+ G+ E+V ++ + L Sbjct: 532 SLVFVTHNLGVVRSLADSVAVLDK------GEIVEIGSSESVLSRPSAAYTKSL 579 Score = 113 bits (284), Expect = 3e-23, Method: Composition-based stats. Identities = 45/222 (20%), Positives = 86/222 (38%), Gaps = 31/222 (13%) Query: 389 ESSAVREELAKFISNRPCA-----SCEGTRLRREARH---------VYVENTPLPAIS-D 433 ES + + ++ + EG RL + A H YV P +++ Sbjct: 375 ESGSGKTTFSRCMIGLHSDWKGEIVLEGRRLSQSAAHRSPDDRRKLQYVFQNPYGSLNPR 434 Query: 434 MSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQ 493 +IG + + + + + ++I L+ V L + R LSGGE Q Sbjct: 435 KTIGGNLA----VPIGHFQTSDDQNRDRQIKAALE---RVELRSAHIDRFPNELSGGEKQ 487 Query: 494 RIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIR- 552 R+ +A + A + + DE + L ++ L L G +++ V H+ +R Sbjct: 488 RVAIARALLAS--PDVMICDEITSALDVSVQAAIVELLRSLMSDGLSLVFVTHNLGVVRS 545 Query: 553 AADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSG 594 AD V + GE+V G E++++ P + + + Sbjct: 546 LADSVAVLDK------GEIVEIGSSESVLSRPSAAYTKSLLA 581 Score = 43.8 bits (102), Expect = 0.030, Method: Composition-based stats. Identities = 20/105 (19%), Positives = 32/105 (30%), Gaps = 7/105 (6%) Query: 623 LKDVTLTLPVGLFTCITGVSGSGKSTLINDTLF---PIAQRQLNGATIAEPAPYRDIQGL 679 +KDV + G + G SGSGK+T+ L P Q + + Sbjct: 21 VKDVNFEIAAGEVLGLVGESGSGKTTISLSLLGFSKPGTAIQTESRIFVDGTDLMTMSPR 80 Query: 680 EHFD----KVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPE 720 + + + Q P + V +R A P Sbjct: 81 ARNEVRGKLITYVPQDPSASLNPAIKIGEQLVEGLMRGRDALSPH 125 >UniRef50_A9CLQ7 ABC transporter, nucleotide binding/ATPase protein (Oligopeptide) n=4 Tax=Proteobacteria RepID=A9CLQ7_AGRT5 Length = 539 Score = 257 bits (658), Expect = 1e-66, Method: Composition-based stats. Identities = 90/521 (17%), Positives = 172/521 (33%), Gaps = 101/521 (19%) Query: 423 VENTPLPAISDMSIGHAMEFFN---NLKLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLT 479 V + I + H + ++ A + I + + RL V + Sbjct: 89 VNGRLIAMIFQDPLSHLNPVYTVGWQMREALRTHGIDNRQAQVEALRLFKRVALPEPEKA 148 Query: 480 LSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHL-RDLG 538 + + SGG+ QR+ +A + L + + DEP+ L +L L L R+ G Sbjct: 149 VDKYPHEFSGGQRQRVMIAMALA--LKPNLLIADEPTTALDVTVQAEVLALLKELQRETG 206 Query: 539 NTVIVVEHDEDAI-RAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRK 597 V+++ HD + AD V+ + G +V G + + P+ + + Sbjct: 207 MGVLIITHDLGVVSEVADRVVVMEK------GVLVESGTVREVYRNPQHPYTKKLIAAAP 260 Query: 598 IEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPI 657 + + E +LK+ AR KS + L I Sbjct: 261 GKGQLHEPSTDGEPILKVRNAR--------------------------KSYGGFEALKGI 294 Query: 658 AQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAG 717 + G T V + +S G++ + Sbjct: 295 SFDLKAGET------------------VAVVGESGSGKSTLARILLRLDDPD-------- 328 Query: 718 VPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLE 777 + +G S + ++M F + Sbjct: 329 SGTAHWKGQDLFTLS--------PSELFKLRRDLQMVFQDPTQSLNPR------------ 368 Query: 778 IKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQR 837 T+++++ E AR + L VGL+ +G+ SGG+ QR Sbjct: 369 -----MTVYQLISEAWVIHPEILPKAKWRARAAELLERVGLSPEHMGRYPHQFSGGQRQR 423 Query: 838 VKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQ-GNTIVVIEHNLDVIK 896 + +AR L+ L + DE + L + Q++ +L KLR + G + I H+L +++ Sbjct: 424 IAIARALA---LEPQLIVCDEAVSALDVSVQAQVVRLLDKLRREMGIAFIFIAHDLPLVR 480 Query: 897 -TADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFL 936 AD+++ + GE++ GT V + + L Sbjct: 481 DFADYVMVM------QKGEVVEFGTVAQVFDNPQQRYTQAL 515 Score = 140 bits (354), Expect = 2e-31, Method: Composition-based stats. Identities = 59/341 (17%), Positives = 108/341 (31%), Gaps = 54/341 (15%) Query: 283 LGVQQYFDPDRVIQNPELSLAGGAIR-GWDRRNFYYFQMLKSLADHYKFDVEAPWGSLSA 341 LGV V+ + + G +R + Y + L + A + P Sbjct: 216 LGVVSEVADRVVVMEKGVLVESGTVREVYRNPQHPYTKKLIAAAPGKG-QLHEPSTD--- 271 Query: 342 NVHKVVLYGSGKENIEFKYMNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFI 401 G + + G +++ F+ L E ES + + LA+ + Sbjct: 272 --------GEPILKVRNARKSYGGFEALKGISFD--LKAGETVAVVGESGSGKSTLARIL 321 Query: 402 SNRPCASCEGTRLR-REARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKIL 460 RL ++ + + L +S + + ++ + Sbjct: 322 ----------LRLDDPDSGTAHWKGQDLFTLSPSELFKLRRDLQMVFQDPTQSLNPRMTV 371 Query: 461 KEI------------------GDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIG 502 ++ + L VGL+ + R SGG+ QRI +A + Sbjct: 372 YQLISEAWVIHPEILPKAKWRARAAELLERVGLSPEHMGRYPHQFSGGQRQRIAIARALA 431 Query: 503 AGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDL-GNTVIVVEHDEDAIR-AADHVIDI 560 L + V DE L +++ L LR G I + HD +R AD+V+ + Sbjct: 432 --LEPQLIVCDEAVSALDVSVQAQVVRLLDKLRREMGIAFIFIAHDLPLVRDFADYVMVM 489 Query: 561 GPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEVP 601 GEVV G + + P+ Q + P Sbjct: 490 QK------GEVVEFGTVAQVFDNPQQRYTQALISATLDPDP 524 Score = 44.2 bits (103), Expect = 0.024, Method: Composition-based stats. Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 5/43 (11%) Query: 4 IEVRGART-----HNLKNINLVIPRDKLIVVTGLSGSGKSSLA 41 ++VR AR LK I+ + + + V G SGSGKS+LA Sbjct: 276 LKVRNARKSYGGFEALKGISFDLKAGETVAVVGESGSGKSTLA 318 >UniRef50_A6UGQ4 ABC transporter related n=7 Tax=Proteobacteria RepID=A6UGQ4_SINMW Length = 546 Score = 253 bits (647), Expect = 2e-65, Method: Composition-based stats. Identities = 89/529 (16%), Positives = 167/529 (31%), Gaps = 103/529 (19%) Query: 423 VENTPLPAISDMSIGHAMEFFNNLKLAGQ--------RAKIAEKILKEIGDRLKFLVNVG 474 + + I + H + + +A + +I R+ + Sbjct: 90 LNGRKIAMIFQDPLSHLNPVYTIGWQMEEVFSVHGVASGGVARQRAIDILRRVG----IP 145 Query: 475 LNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHL 534 + + SGG+ QRI + I L + + DEP+ L ++L L L Sbjct: 146 EPEKRIDQYPHQFSGGQRQRIMIGMAIA--LRPEILIADEPTTALDVSVQAQILELLKKL 203 Query: 535 RDL-GNTVIVVEHDEDAIR-AADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYM 592 + G +I++ HD + AD VI + G +V EG A+ P + + Sbjct: 204 QAEDGLAIIMITHDLEVAANMADRVIVM------KSGRIVEEGEARAVFENPAHTYTRTL 257 Query: 593 SGKRKI---EVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTL 649 E P KR + +L++ K Sbjct: 258 INALPHGDHEAPPKRGRPAGKPILEVRNID--------------------------KFYT 291 Query: 650 INDTLFPIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFT 709 ++ F R ++ + + + +S G++ + + Sbjct: 292 LSSGFFAKPARLHAVKKLSFDVAAGET--------IGIVGESGSGKSTVARVLLGLNEAS 343 Query: 710 PVRELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGK 769 LF G + F KV+M F + Sbjct: 344 GGEALFHGRDILKMDRKELLAF----------------RRKVQMVFQDPYSSMNPR---- 383 Query: 770 RYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATT 829 T+ +++ ++ + R + L VGL + Sbjct: 384 -------------MTVLDIVSEPWRIHKDILEKPRWRDRVTELLGLVGLNPEHAARYPHQ 430 Query: 830 LSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQ-GNTIVVI 888 SGG+ QR+ +AR L+ L + DE + L + Q++ +L +LRD+ G + I Sbjct: 431 FSGGQRQRIAIARALA---CDPELVVCDEAVSALDVSVQVQVIGLLAELRDRLGLAYIFI 487 Query: 889 EHNLDVIKT-ADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFL 936 H+L +++ AD I+ + GEI+ T E + R L Sbjct: 488 THDLPIVRHFADRIIVM------KSGEIVEHATTEEIFRSPQHAYTRQL 530 Score = 140 bits (352), Expect = 3e-31, Method: Composition-based stats. Identities = 42/140 (30%), Positives = 64/140 (45%), Gaps = 13/140 (9%) Query: 805 ALARKLQTLMDVGLTYI--RLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTG 862 A R + L VG+ R+ Q SGG+ QR+ + ++ R + I DEPTT Sbjct: 131 ARQRAIDILRRVGIPEPEKRIDQYPHQFSGGQRQRIMIGMAIALR---PEILIADEPTTA 187 Query: 863 LHFADIQQLLDVLHKL-RDQGNTIVVIEHNLDVIK-TADWIVDLGPEGGSGGGEILVSGT 920 L + Q+L++L KL + G I++I H+L+V AD ++ + G I+ G Sbjct: 188 LDVSVQAQILELLKKLQAEDGLAIIMITHDLEVAANMADRVIVM------KSGRIVEEGE 241 Query: 921 PETVAECEASHTARFLKPML 940 V E A R L L Sbjct: 242 ARAVFENPAHTYTRTLINAL 261 Score = 127 bits (319), Expect = 2e-27, Method: Composition-based stats. Identities = 44/190 (23%), Positives = 71/190 (37%), Gaps = 16/190 (8%) Query: 415 RREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKE--IGDRLKFLVN 472 R+E + + L + + +I + IL++ DR+ L+ Sbjct: 359 RKELLAFR---RKVQMVFQDPYSSMNPRMTVLDIVSEPWRIHKDILEKPRWRDRVTELLG 415 Query: 473 -VGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTL 531 VGLN +R SGG+ QRI +A + + V DE L +++G L Sbjct: 416 LVGLNPEHAARYPHQFSGGQRQRIAIARALAC--DPELVVCDEAVSALDVSVQVQVIGLL 473 Query: 532 IHLRDL-GNTVIVVEHDEDAIRA-ADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTG 589 LRD G I + HD +R AD +I + GE+V E I P+ Sbjct: 474 AELRDRLGLAYIFITHDLPIVRHFADRIIVM------KSGEIVEHATTEEIFRSPQHAYT 527 Query: 590 QYMSGKRKIE 599 + + Sbjct: 528 RQLINATPKP 537 Score = 48.1 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 19/86 (22%), Positives = 27/86 (31%), Gaps = 7/86 (8%) Query: 617 GARGNNLKDVTLTLPVGLFTCITGVSGSGKS---TLINDTLFPIAQRQLNGATIAEPAPY 673 G V+ + G I G SGSGKS + I + G+ Sbjct: 20 GGSFRATNGVSFHVDAGETLVILGESGSGKSVSASAIMGLIDTPPGDICAGSVAYRGRDL 79 Query: 674 RDIQGLEHFD----KVIDIDQSPIGR 695 + E D K+ I Q P+ Sbjct: 80 SSLSEGERRDLNGRKIAMIFQDPLSH 105 Score = 42.3 bits (98), Expect = 0.098, Method: Composition-based stats. Identities = 13/33 (39%), Positives = 21/33 (63%) Query: 9 ARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLA 41 AR H +K ++ + + I + G SGSGKS++A Sbjct: 301 ARLHAVKKLSFDVAAGETIGIVGESGSGKSTVA 333 >UniRef50_D1C0E7 ABC transporter related protein n=5 Tax=Actinomycetales RepID=D1C0E7_XYLCX Length = 587 Score = 253 bits (646), Expect = 3e-65, Method: Composition-based stats. Identities = 96/571 (16%), Positives = 177/571 (30%), Gaps = 124/571 (21%) Query: 412 TRLRREARHVYVENTPLPAISDMSIGHAMEFF-------NNLKLAGQRAKIAEKILKEIG 464 RL + + + + + + L + + Sbjct: 89 RRLAP------LRGSLVSMVFQEPMTALNPLLRVGRQVAEVITLHPSTLHTSRRRGDARA 142 Query: 465 DRLKFLVNVGLN--YLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQR 522 ++ L VGL LSGG+ QR+ +A + + V DEP+ L Sbjct: 143 RAVELLGEVGLPDPAAAARAYPHQLSGGQRQRVMIAMALAN--DPALLVADEPTTALDVT 200 Query: 523 DNERLLGTLIHL-RDLGNTVIVVEHDEDAI-RAADHVIDIGPGAGVHGGEVVAEGPLEAI 580 ++L + L G ++ + HD + + + V+ + GA VV +GP+ + Sbjct: 201 VQAQVLELMGRLVARRGTGLLFITHDLAVVSQVCERVVVMKDGA------VVEQGPVAEV 254 Query: 581 MAVPESLTGQYMSGKRKIEV-----------------------PKKRVPANPEKVLKLTG 617 A P + + + P R+ ++ + G Sbjct: 255 FANPRHDYTRTLLAASILPPRPAVVEPRPPVVEPVETTSTTGRPAIRLRDVTKRFHRSGG 314 Query: 618 ARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAEPAPYRDIQ 677 + L+ ++ + G + G SGSGK+T + L +G + Sbjct: 315 VVVDALRGISFEVAPGERFGLVGESGSGKTTTLR--LLAALDTPTSGTVEVAGVTLAALP 372 Query: 678 GLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESRARGYTPGRFSFNVRG 737 VPE R RG G Sbjct: 373 P-------------------------------------TSVPEDRPRGSGTRPTG--TFG 393 Query: 738 GRCEACQGDGVI-KVEMHFLPDIYVPCDQCKGKRYNRETLEIKYKGKTIHEVLDMTI--- 793 GR A V +++ F + + + +++ + Sbjct: 394 GRARARDVARVRSDLQLVFQDPMGSLDPR-----------------MAVADIVAEPLLNP 436 Query: 794 ---EEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTG 850 E E L VGL + SGG+ QR+ +AR L R Sbjct: 437 ANRRELPEAATRAGRERLVRDVLAAVGLPDDAAARYPHQFSGGQRQRISIARALVCR--- 493 Query: 851 QTLYILDEPTTGLHFADIQQLLDVLHKLRDQ-GNTIVVIEHNLDVIKT-ADWIVDLGPEG 908 + + DEP + L + Q+LD+L +L D+ T+V++ H+L V++ D + + Sbjct: 494 PKVLVADEPVSALDVSVRAQVLDLLARLADERDLTLVLVSHDLAVVRHLCDRVAVMR--- 550 Query: 909 GSGGGEILVSGTPETVAECEASHTARFLKPM 939 GEI+ G + + R L+ Sbjct: 551 ---AGEIVEQGPADRIWTEPQHEYTRTLQAA 578 Score = 128 bits (323), Expect = 7e-28, Method: Composition-based stats. Identities = 47/201 (23%), Positives = 73/201 (36%), Gaps = 19/201 (9%) Query: 415 RREARHVYVENTPLPAISDMSIGHAME-------FFNNLKLAGQRAKIAEKILKEIGDRL 467 R AR V + L + +G L R ++ E + +RL Sbjct: 395 RARARDVARVRSDLQLVFQDPMGSLDPRMAVADIVAEPLLNPANRRELPEAATRAGRERL 454 Query: 468 --KFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNE 525 L VGL +R SGG+ QRI +A + + V DEP L Sbjct: 455 VRDVLAAVGLPDDAAARYPHQFSGGQRQRISIARALVCR--PKVLVADEPVSALDVSVRA 512 Query: 526 RLLGTLIHLRDL-GNTVIVVEHDEDAIRA-ADHVIDIGPGAGVHGGEVVAEGPLEAIMAV 583 ++L L L D T+++V HD +R D V + GE+V +GP + I Sbjct: 513 QVLDLLARLADERDLTLVLVSHDLAVVRHLCDRVAVM------RAGEIVEQGPADRIWTE 566 Query: 584 PESLTGQYMSGKRKIEVPKKR 604 P+ + + + R Sbjct: 567 PQHEYTRTLQAATPVLTTTPR 587 Score = 42.3 bits (98), Expect = 0.091, Method: Composition-based stats. Identities = 16/104 (15%), Positives = 31/104 (29%), Gaps = 6/104 (5%) Query: 596 RKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLF 655 + P + + T + V+L + G + G SGSGKS L Sbjct: 4 PALAEPVGTPALRVDDLTVRTAGGRTLVSGVSLQVAAGERVGLIGESGSGKSLTALSVLG 63 Query: 656 PIAQRQLNGATIAEPAPYRDIQGLEHF------DKVIDIDQSPI 693 + + + + + + V + Q P+ Sbjct: 64 LLPDNLVATGRVDVAGEHDLLARSDRRLAPLRGSLVSMVFQEPM 107 >UniRef50_B6W739 Putative uncharacterized protein n=1 Tax=Anaerococcus hydrogenalis DSM 7454 RepID=B6W739_9FIRM Length = 269 Score = 252 bits (645), Expect = 4e-65, Method: Composition-based stats. Identities = 118/200 (59%), Positives = 155/200 (77%), Gaps = 1/200 (0%) Query: 623 LKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAEPAPYRDIQGLEHF 682 +K + + P+ FT +TGVSGSGKS+L+N+ L+ ++LN + P + I+G+E Sbjct: 1 MKGIDVKFPLSTFTAVTGVSGSGKSSLVNEILYKSVTKKLNKSKT-HPGKHDSIEGVEQI 59 Query: 683 DKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESRARGYTPGRFSFNVRGGRCEA 742 DK+I IDQSPIGRTPRSNPATYT +F +R++FA E++ +G+ GRFSFNV+GGRCEA Sbjct: 60 DKIISIDQSPIGRTPRSNPATYTKLFDNIRDVFAMTTEAKMKGFDKGRFSFNVKGGRCEA 119 Query: 743 CQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDA 802 C+GDG IKV+M FLPD+YVPC+ C G+RYNRETLE+KYKGK I EVLDMT+EEA +FF+ Sbjct: 120 CKGDGTIKVDMMFLPDVYVPCEVCHGQRYNRETLEVKYKGKNISEVLDMTVEEALKFFEN 179 Query: 803 VPALARKLQTLMDVGLTYIR 822 P++ RKLQTL DVGL YI+ Sbjct: 180 HPSIVRKLQTLYDVGLGYIK 199 Score = 96.2 bits (238), Expect = 6e-18, Method: Composition-based stats. Identities = 33/112 (29%), Positives = 53/112 (47%), Gaps = 7/112 (6%) Query: 14 LKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQFLSLMEKPDV 73 +K I++ P VTG+SGSGKSSL + LY ++ +S + + + Sbjct: 1 MKGIDVKFPLSTFTAVTGVSGSGKSSLVNEILYKSVTKKLNKSKTHPGKH-------DSI 53 Query: 74 DHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCPDHDV 125 + +E + ISI+Q PRS T T++ D +R +FA E + D Sbjct: 54 EGVEQIDKIISIDQSPIGRTPRSNPATYTKLFDNIRDVFAMTTEAKMKGFDK 105 Score = 61.2 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 21/84 (25%), Positives = 33/84 (39%), Gaps = 14/84 (16%) Query: 403 NRPCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKE 462 PC C G R RE V + + + DM++ A++FF N Sbjct: 137 YVPCEVCHGQRYNRETLEVKYKGKNISEVLDMTVEEALKFFEN--------------HPS 182 Query: 463 IGDRLKFLVNVGLNYLTLSRSAET 486 I +L+ L +VGL Y+ + Sbjct: 183 IVRKLQTLYDVGLGYIKNRSTINR 206 >UniRef50_A1SZD0 ABC transporter for oligopeptide ATP-binding protein n=6 Tax=Proteobacteria RepID=A1SZD0_PSYIN Length = 587 Score = 251 bits (642), Expect = 7e-65, Method: Composition-based stats. Identities = 91/546 (16%), Positives = 169/546 (30%), Gaps = 126/546 (23%) Query: 422 YVENTPLPAISDMSIG---HAMEFFNNLKLA-----GQRAKIAEKILKEIGDRLKFLVNV 473 V + I + A+ + + G A ++ E+ +R+ + Sbjct: 99 KVRGGLVSMIFQEPMASFAPAIRISDQIVETMQIHLGYSRDKARRVGIELFERVG----I 154 Query: 474 GLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIH 533 + LSGG QR +A + + + DEP+ L ++L + Sbjct: 155 VDPARRFDQYVFELSGGMRQRAMIAMALSTK--PKLLIADEPTTALDVTIQAQVLDLMRE 212 Query: 534 LRDL-GNTVIVVEHDEDAI-RAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQY 591 LR+ G ++ + HD I + AD+V + G +V G + ++ P+ Q Sbjct: 213 LREEMGMAMLFITHDLGVISKIADNVTVM------RQGNIVEAGNADQVLFQPQHHYTQR 266 Query: 592 MSGKRK----IEVPKKRVPANPEKVLKLT-----GARGN------NLKDVTLTLPVGLFT 636 + + K P + L+ G + +K+++L LP G Sbjct: 267 LLAALPNLDNLPEAPKEKPQPLLSINNLSISYPLGGSSHKQEMFKAVKNISLDLPEGQII 326 Query: 637 CITGVSGSGKSTLINDTLFPIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRT 696 + G SGSGK++ + L GA + + Sbjct: 327 GLVGESGSGKTS---------LGKALLGAAPISEGSVKYHNTKKKV-------------- 363 Query: 697 PRSNPATYTGVFTPVRELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFL 756 F N R R + +M F Sbjct: 364 ---------------------------------HFGANKRLKRKRLSK-----TAQMVFQ 385 Query: 757 PDIYVPCDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDV 816 + TI +++ +E + R ++ Sbjct: 386 DPHSSLNPR-----------------MTIRDIIAEPLEAMKLTSSREETDRRIIEVAKRC 428 Query: 817 GLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLH 876 + L + SGG+ QR+ +AR L + DE L + ++L +L Sbjct: 429 HIEVAHLRRFPHAFSGGQRQRISIARALV---CKPKFIVADESVAALDVSIQAEILALLK 485 Query: 877 KLRDQ-GNTIVVIEHNLDVIK-TADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTAR 934 +LR + G TI+ I H+L VI DW+ + G ++ GT + + Sbjct: 486 ELRTELGLTILFISHDLSVIANLCDWVCVM------KDGSMVEQGTVRQIFLKPQQPYTQ 539 Query: 935 FLKPML 940 L + Sbjct: 540 TLIASI 545 Score = 125 bits (314), Expect = 8e-27, Method: Composition-based stats. Identities = 42/212 (19%), Positives = 71/212 (33%), Gaps = 19/212 (8%) Query: 412 TRLRREARHVYVENTPLPAISDMSIGHAMEF-FNNLKLAGQRAKIAEKILKEIGDRLKFL 470 RL + A+ V+ + M+I + +KL R + +I ++ Sbjct: 374 KRLSKTAQMVFQDPHS-SLNPRMTIRDIIAEPLEAMKLTSSREETDRRI-------IEVA 425 Query: 471 VNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGT 530 + L R SGG+ QRI +A + V DE L +L Sbjct: 426 KRCHIEVAHLRRFPHAFSGGQRQRISIARALVCK--PKFIVADESVAALDVSIQAEILAL 483 Query: 531 LIHLR-DLGNTVIVVEHDEDAIR-AADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLT 588 L LR +LG T++ + HD I D V + G +V +G + I P+ Sbjct: 484 LKELRTELGLTILFISHDLSVIANLCDWVCVMKD------GSMVEQGTVRQIFLKPQQPY 537 Query: 589 GQYMSGKRKIEVPKKRVPANPEKVLKLTGARG 620 Q + + + + R Sbjct: 538 TQTLIASIPLLESPQAQLEPFPEYTAPKAQRQ 569 Score = 43.4 bits (101), Expect = 0.037, Method: Composition-based stats. Identities = 19/47 (40%), Positives = 28/47 (59%), Gaps = 4/47 (8%) Query: 14 LKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYA----EGQRRYVES 56 +KNI+L +P ++I + G SGSGK+SL L A EG +Y + Sbjct: 313 VKNISLDLPEGQIIGLVGESGSGKTSLGKALLGAAPISEGSVKYHNT 359 Score = 42.7 bits (99), Expect = 0.078, Method: Composition-based stats. Identities = 16/86 (18%), Positives = 28/86 (32%), Gaps = 11/86 (12%) Query: 621 NNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFP-------IAQRQLNGATIAEPAPY 673 + + L + G + G SGSGKS + Q +L ++ Sbjct: 30 RAVDGIDLNIRPGEVMGLVGESGSGKSITAKSIMQLLPGNAIIAPQSELRIRHDSQDIDI 89 Query: 674 RDIQGLEHFD----KVIDIDQSPIGR 695 ++G + V I Q P+ Sbjct: 90 LKLRGRDLRKVRGGLVSMIFQEPMAS 115 >UniRef50_C4ZK41 Oligopeptide/dipeptide ABC transporter, ATPase subunit n=11 Tax=Bacteria RepID=C4ZK41_THASP Length = 695 Score = 251 bits (642), Expect = 7e-65, Method: Composition-based stats. Identities = 97/543 (17%), Positives = 170/543 (31%), Gaps = 48/543 (8%) Query: 416 REARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGD---RLKFLVN 472 EA V + I + + RL V Sbjct: 94 PEAAMRRVRGGRIGMIFQEPATSLNPVMSVGAQIAEALAAHGLRGAAARAEACRLLAAVG 153 Query: 473 VGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLI 532 + L SGG QR+ +A + + + DEP+ L ++L L Sbjct: 154 IPDPERRLQEFPFQFSGGMKQRVMIAIALAGR--PRLLIADEPTTALDVTIQAQVLDLLA 211 Query: 533 HL-RDLGNTVIVVEHDEDAI-RAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQ 590 L R G ++++ HD + R A V + + G+VV GP EA A P + Sbjct: 212 ELQRREGMAMLLITHDLGVVARVAHRVGVM------YAGQVVESGPREAFFATPLHPYSR 265 Query: 591 YM----------SGKRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITG 640 + G V P + +P G Sbjct: 266 KLFAALPEAAKRGGALDAPVGSVPPPDRHFPGCRFAERCPAAFDRCDEEVP---VWHAVG 322 Query: 641 VSGSGKSTLINDTLF-PIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDID-QSPIGRTPR 698 + + L+ +A + A A + + +V ++ P+ + Sbjct: 323 ------TQAVRCHLYEGVAIPRRFVRETAGAADVVAARPAQSVLEVAELAVHFPVRKGFL 376 Query: 699 SNPATYTGVFTPVRELFA-GVPESRARGYTPGRFSFNVRGGR-CEACQGDGVIKVEMHFL 756 + V G + G+ + R E G + E + Sbjct: 377 RRTVGHVKAVDGVSLRLQPGRTLALVGESGCGKTTVGKALLRLIEPTAGRLWLDGERYDA 436 Query: 757 PDIYVPCDQCKGKRYNRETLEIKY-KGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMD 815 + + + + + E+++ + D AR + L Sbjct: 437 LPLSALQPLRRAVQMVFQDPFASLDPRMRVGEIIEEGLAALGVGADHRARQARVTELLER 496 Query: 816 VGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVL 875 VGL+ + SGG+ QR+ +AR L+ + + DEPT+ L + QLL+++ Sbjct: 497 VGLSAEMRWRYPHEFSGGQRQRIAVARALA---VAPRVIVCDEPTSALDVSVQAQLLNLM 553 Query: 876 HKL-RDQGNTIVVIEHNLDVIK-TADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTA 933 +L +QG + I HNL V++ AD + + G I+ G E V A Sbjct: 554 RELQHEQGLAYLFITHNLAVVEYLADEVAVM------YLGRIVEEGPIERVLGVRAHPYT 607 Query: 934 RFL 936 R L Sbjct: 608 RAL 610 Score = 130 bits (328), Expect = 2e-28, Method: Composition-based stats. Identities = 75/361 (20%), Positives = 109/361 (30%), Gaps = 102/361 (28%) Query: 592 MSGKRKIEVPKKRVPANPE------KVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSG 645 M+ ++P+ A + + G + V + G + G SG G Sbjct: 1 MNAPLPADLPEAATAALLHVEGLGVAIARTDGEEVRPVDGVNFAIAAGETFALLGESGCG 60 Query: 646 KS--TLINDTLFPIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPAT 703 KS L L P R G+ Sbjct: 61 KSMTALALARLLPDGGRIAAGSVRLGDE-------------------------------- 88 Query: 704 YTGVFTPVRELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPC 763 +L A + R VRGGR + M F Sbjct: 89 ---------DLLALPEAAMRR----------VRGGR-----------IGMIFQEPATSLN 118 Query: 764 DQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLT--YI 821 G I E L A A A + L VG+ Sbjct: 119 PVMS-------------VGAQIAEAL------AAHGLRGAAARAEACRLLAAVGIPDPER 159 Query: 822 RLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKL-RD 880 RL + SGG QRV +A L+ R L I DEPTT L Q+LD+L +L R Sbjct: 160 RLQEFPFQFSGGMKQRVMIAIALAGR---PRLLIADEPTTALDVTIQAQVLDLLAELQRR 216 Query: 881 QGNTIVVIEHNLDVI-KTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLKPM 939 +G +++I H+L V+ + A + + G+++ SG E +R L Sbjct: 217 EGMAMLLITHDLGVVARVAHRVGVM------YAGQVVESGPREAFFATPLHPYSRKLFAA 270 Query: 940 L 940 L Sbjct: 271 L 271 Score = 119 bits (299), Expect = 4e-25, Method: Composition-based stats. Identities = 43/251 (17%), Positives = 87/251 (34%), Gaps = 36/251 (14%) Query: 375 EGVLHNMERRYKETESSAVREELAKFISNRPCASCEGT-------RL-RREARHVYVENT 426 +G L K + ++R + + ++ + C T RL A ++++ Sbjct: 373 KGFLRRTVGHVKAVDGVSLRLQPGRTLALVGESGCGKTTVGKALLRLIEPTAGRLWLDGE 432 Query: 427 PLPAISDMSIGHAMEFFNNLKLAG-----QRAKIAEKILKEIGD------------RLKF 469 A+ ++ + R ++ E I + + R+ Sbjct: 433 RYDALPLSALQPLRRAVQMVFQDPFASLDPRMRVGEIIEEGLAALGVGADHRARQARVTE 492 Query: 470 LVNVGLNYLTLS-RSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLL 528 L+ + R SGG+ QRI +A + + V DEP+ L +LL Sbjct: 493 LLERVGLSAEMRWRYPHEFSGGQRQRIAVARALAVA--PRVIVCDEPTSALDVSVQAQLL 550 Query: 529 GTLIHL-RDLGNTVIVVEHDEDAIR-AADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPES 586 + L + G + + H+ + AD V + + G +V EGP+E ++ V Sbjct: 551 NLMRELQHEQGLAYLFITHNLAVVEYLADEVAVM------YLGRIVEEGPIERVLGVRAH 604 Query: 587 LTGQYMSGKRK 597 + + Sbjct: 605 PYTRALLAAVP 615 >UniRef50_C2CTN2 Oligopeptide/dipeptide ABC superfamily ATP binding cassette transporter, ATPase subunit n=2 Tax=Gardnerella vaginalis RepID=C2CTN2_GARVA Length = 631 Score = 251 bits (642), Expect = 8e-65, Method: Composition-based stats. Identities = 92/537 (17%), Positives = 182/537 (33%), Gaps = 49/537 (9%) Query: 415 RREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKE--IGDRLKFLVN 472 + +A + + + + F+ + I + E I +R L+N Sbjct: 97 KSDAEMSKIRGKNIAMVFQDPLSALTPVFSIGDQLKEALVIHNPNMTEDQIRERSIELLN 156 Query: 473 VGLNYLTLSR---SAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLG 529 + R SGG QR+ +A I + + DEP+ L ++L Sbjct: 157 LVGITKPAERLKAFPHEFSGGMRQRVMIAMAIANN--PDIIIADEPTTALDVTIQAQVLD 214 Query: 530 TLIHL-RDLGNTVIVVEHDEDAIR-AADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESL 587 L ++ G +I + HD I AD VI + + G +V +E I P Sbjct: 215 VLKKAQKETGAAMIFITHDLGVIAGVADEVIVM------YAGHLVEHNSVEEIFTHPTQP 268 Query: 588 TGQYMSGKRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKS 647 + G K+ +LT + + G + + G+ +S Sbjct: 269 YTIGLLGAVPRVDQKRT--------RRLTPISKPTMDMLMAEEKSGDTSDMMGLE--AES 318 Query: 648 TLINDTLFPIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYT-- 705 + L ++ + + E P D + + ++ G R Sbjct: 319 ETVRALLHAETEKTI--KPMFEGIPREDRKVVLDVKGLVKTFPITGGGFLRRKVGEVRAV 376 Query: 706 -GVFTPVRE--LFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVP 762 G+ +RE A V ES G + + V +++ Sbjct: 377 DGIDLEIREGETVALVGES---GSGKSTTLMEIMSLKKPEAGSITVFGTDLNDKLTKEQR 433 Query: 763 CDQCKGKRYNRETLEIKY-KGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYI 821 + +Y + ++++L + + R + + V L Sbjct: 434 RELRSKIQYVFQDPMSSLDPRMLVYDILAEPL--HVQKKSKEEIRQRIAELMQLVELNPD 491 Query: 822 RLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQ 881 ++ + T SGG+ QR+ +AR L+ L +LDEP + L + ++++L L+D+ Sbjct: 492 QVDRFPTQFSGGQRQRIAIARALA---VNPKLLLLDEPVSALDVSIQAGIINLLEDLQDK 548 Query: 882 -GNTIVVIEHNLDVIKT-ADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFL 936 G + + HN+ V++ + I + G I+ SG + V + + L Sbjct: 549 LGVAYLFVAHNMAVVRHISSRIAVMYH------GRIVESGETDEVFDNPKHPYTKAL 599 Score = 138 bits (348), Expect = 1e-30, Method: Composition-based stats. Identities = 49/291 (16%), Positives = 93/291 (31%), Gaps = 42/291 (14%) Query: 336 WGSLSANVHKVVLYGSG-KENIEFKYMNDRGDTSIRRHPFEGVLHNMERRY---KETESS 391 + + KVVL G + +G+ + ES Sbjct: 337 FEGIPREDRKVVLDVKGLVKTFPITGGGFLRRKVGEVRAVDGIDLEIREGETVALVGESG 396 Query: 392 AVREE-LAKFISNRPCASCEGTRLRREARHVYVENTPLPA----------------ISDM 434 + + L + +S + + EA + V T L + Sbjct: 397 SGKSTTLMEIMSLK----------KPEAGSITVFGTDLNDKLTKEQRRELRSKIQYVFQD 446 Query: 435 SIGHAMEFFNNLKLAGQRAKIAEKILKEIGDRLKFLVN-VGLNYLTLSRSAETLSGGEAQ 493 + + + + +K +EI R+ L+ V LN + R SGG+ Q Sbjct: 447 PMSSLDPRMLVYDILAEPLHVQKKSKEEIRQRIAELMQLVELNPDQVDRFPTQFSGGQRQ 506 Query: 494 RIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDL-GNTVIVVEHDEDAIR 552 RI +A + + +LDEP L ++ L L+D G + V H+ +R Sbjct: 507 RIAIARALAVN--PKLLLLDEPVSALDVSIQAGIINLLEDLQDKLGVAYLFVAHNMAVVR 564 Query: 553 A-ADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEVPK 602 + + + + G +V G + + P+ + + I P Sbjct: 565 HISSRIAVM------YHGRIVESGETDEVFDNPKHPYTKALISAVPIPDPA 609 Score = 46.5 bits (109), Expect = 0.005, Method: Composition-based stats. Identities = 14/94 (14%), Positives = 29/94 (30%), Gaps = 5/94 (5%) Query: 607 ANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGAT 666 N + + ++++ L G I G SGSGKS + + + + Sbjct: 27 RNLQISFASEAGTVHAVRNMNFDLYRGKTIGIVGESGSGKSVTSLAVMGLLDKNASVKGS 86 Query: 667 IAEPAPYRDIQGLEHFDK-----VIDIDQSPIGR 695 + + K + + Q P+ Sbjct: 87 VVYKGEELLTKSDAEMSKIRGKNIAMVFQDPLSA 120 >UniRef50_A6GS20 Oligopeptide/dipeptide ABC transporter, ATPase subunit n=2 Tax=Proteobacteria RepID=A6GS20_9BURK Length = 609 Score = 250 bits (639), Expect = 2e-64, Method: Composition-based stats. Identities = 100/546 (18%), Positives = 193/546 (35%), Gaps = 54/546 (9%) Query: 417 EARHVYVENTPLPAISDMS---IGHAMEFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNV 473 E + + I + M + L A K + +G+ ++L V Sbjct: 85 ETAMRTLRGKRIAMIFQEPGTSLNPVMTVGDQLTEIICLHTGASKS-QALGEAEEWLGRV 143 Query: 474 GLNY--LTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTL 531 G+ L + +SGG+ QR+ +A + + + + DEP+ L ++L L Sbjct: 144 GIPEPKKRLQQYPFEMSGGQKQRVMIAMAL--SVKPDLLIADEPTTALDVSIQAQVLDLL 201 Query: 532 IHL-RDLGNTVIVVEHDEDAIR-AADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTG 589 L R+ G ++++ HD ++ AD V + + G++V + A P Sbjct: 202 KTLQREQGMAMLLITHDLAIVKQMADTVGLM------YAGQLVEKASTAEFFAAPRHPYA 255 Query: 590 QYMSGKRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTL 649 + + + +R A ++ N C+ ++T Sbjct: 256 HALV--KSLPSQAQRGQALYALEGRVPSL-VNPKPGCRFAAR-----CMHAQDHCTQNT- 306 Query: 650 INDTLFPIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFT 709 + ++ A+ + ++ G + Q + S Y Sbjct: 307 -PELDLATTTHEVRCFYHADLSFHKPQSGSQPGGDSTQSGQGKVVLQTVSLSVAYPEKGG 365 Query: 710 PVRELFAGVPESRARGYTPGRFSF----NVRGGRCEACQGDGVIKVEMHFLPDIYV---- 761 +R+ F V GR + G A G+I D+ + Sbjct: 366 LLRKQFKPVLNRLDLTLQQGRTVALVGESGSGKTTAARALLGLIGSNAKVEGDVLMDSRP 425 Query: 762 ----PCDQCKGKR----YNRETLEIKYKGKT-IHEVLDMTIEEAREFFDAVPALARKLQT 812 +G R + + + I E+L+ + R D AR L+ Sbjct: 426 LRQWAERGPEGWRSKIQFVFQDPFASLNPRHRIAEILEEPLLSLRPDLDVAARKARVLKV 485 Query: 813 LMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLL 872 + V + L + SGG+ QR+ +AR L + + I DEPT+ L + Q+L Sbjct: 486 IEQVSMPEEALARFPHEFSGGQRQRIAIARALV---SEPKILICDEPTSALDVSVQAQIL 542 Query: 873 DVLHKLRDQ-GNTIVVIEHNLDVIK-TADWIVDLGPEGGSGGGEILVSGTPETVAECEAS 930 ++L +L+++ G ++ I HNL V++ AD +V L G+++ G+ E + Sbjct: 543 NLLKRLQNETGVAMLFITHNLAVVQYLADEVVVLRH------GDVVERGSAEQLFANPQH 596 Query: 931 HTARFL 936 R L Sbjct: 597 AYTRQL 602 Score = 137 bits (344), Expect = 3e-30, Method: Composition-based stats. Identities = 45/218 (20%), Positives = 82/218 (37%), Gaps = 38/218 (17%) Query: 383 RRYKETESSAVREELAKFISNRPCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEF 442 R++ E R ++ +F+ P AS L R + I + + Sbjct: 427 RQWAERGPEGWRSKI-QFVFQDPFAS-----LNPRHR--------IAEILEEPL------ 466 Query: 443 FNNLKLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIG 502 L L A K LK + V + L+R SGG+ QRI +A + Sbjct: 467 ---LSLRPDLDVAARK-----ARVLKVIEQVSMPEEALARFPHEFSGGQRQRIAIARALV 518 Query: 503 AGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDL-GNTVIVVEHDEDAIR-AADHVIDI 560 + + + DEP+ L ++L L L++ G ++ + H+ ++ AD V+ + Sbjct: 519 SE--PKILICDEPTSALDVSVQAQILNLLKRLQNETGVAMLFITHNLAVVQYLADEVVVL 576 Query: 561 GPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKI 598 G+VV G E + A P+ + + + Sbjct: 577 ------RHGDVVERGSAEQLFANPQHAYTRQLIDAAPL 608 Score = 129 bits (324), Expect = 5e-28, Method: Composition-based stats. Identities = 65/325 (20%), Positives = 104/325 (32%), Gaps = 86/325 (26%) Query: 620 GNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAEPAPYRDIQGL 679 + L D++L + G + G SG GKS L +GA +A + Sbjct: 20 VHALDDISLAIEKGQTFALVGESGCGKS---MTALSIARLLPDSGAIVAGQVKLSEASQA 76 Query: 680 EHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESRARGYTPGRFSFNVRGGR 739 + V+ I + T +R L Sbjct: 77 DT--DVLRISE------------------TAMRTLRGKR--------------------- 95 Query: 740 CEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREF 799 + M F G + E++ + Sbjct: 96 -----------IAMIFQEPGTSLNPVMT-------------VGDQLTEIICL-----HTG 126 Query: 800 FDAVPALARKLQTLMDVGLTYIRL--GQSATTLSGGEAQRVKLARELSKRGTGQTLYILD 857 AL + L VG+ + Q +SGG+ QRV +A LS + L I D Sbjct: 127 ASKSQALGEAEEWLGRVGIPEPKKRLQQYPFEMSGGQKQRVMIAMALSVK---PDLLIAD 183 Query: 858 EPTTGLHFADIQQLLDVLHKL-RDQGNTIVVIEHNLDVIK-TADWIVDLGPEGGSGGGEI 915 EPTT L + Q+LD+L L R+QG +++I H+L ++K AD + G G++ Sbjct: 184 EPTTALDVSIQAQVLDLLKTLQREQGMAMLLITHDLAIVKQMADTV------GLMYAGQL 237 Query: 916 LVSGTPETVAECEASHTARFLKPML 940 + + A L L Sbjct: 238 VEKASTAEFFAAPRHPYAHALVKSL 262 >UniRef50_Q13ND7 ABC peptide transporter, duplicated ATPase subunits n=4 Tax=Bacteria RepID=Q13ND7_BURXL Length = 571 Score = 249 bits (636), Expect = 4e-64, Method: Composition-based stats. Identities = 106/532 (19%), Positives = 179/532 (33%), Gaps = 66/532 (12%) Query: 423 VENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKI-LKEIGDRLKFLVNVGLNYLTLS 481 + + I + + + + E + R L+ + Sbjct: 82 IRGRQISMIFQEPMTSLNPVLSIGTQIVETLRQHESLSKAAAWKRAVELLELVQIPDPQR 141 Query: 482 R---SAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLR-DL 537 R LSGG+ QR+ +A + + + DEP+ L +L L LR +L Sbjct: 142 RIFDFPHELSGGQRQRVMIAMAVACR--PRLLIADEPTTALDVTIQAHILELLDGLRREL 199 Query: 538 GNTVIVVEHDED-AIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKR 596 +++++ HD + AD V + GE V E P+ + P+ + + G Sbjct: 200 SMSLLLITHDLGIVAKHADRVAVM------LAGEKVEEAPVARLFTQPQHPYTRGLLGAS 253 Query: 597 K--IEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKS----TLI 650 + R PE + + V ++ G + + G S L+ Sbjct: 254 LNLADDLHYRGWKLPEIRHGIDEDGKPSFAVVPRSVRTGNYVADADPAARGASAGEAPLL 313 Query: 651 NDTLFPIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTP 710 I Q +G + +Q + V + +S G++ S Sbjct: 314 ELQDLRIDYPQRHGKSTLHAVDGVSLQIARG-ETVGLVGESGCGKSTLSKAI-------- 364 Query: 711 VRELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKR 770 +R + R RG V G E V+M F + Sbjct: 365 LRLVPTASGAIRLRGTDL------VPLG--ERELRPLRRHVQMVFQDPYASLNPR----- 411 Query: 771 YNRETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTL 830 +T+ E+LD T+ +A AR L VGL LG+ Sbjct: 412 ------------RTVAEILD-TVLVVNGIGNAQQRRARVAAMLDRVGLPGSALGRFPHEF 458 Query: 831 SGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKL-RDQGNTIVVIE 889 SGG+ QR+ +AR L L I DEP + L + Q+L++L L RD G + I Sbjct: 459 SGGQRQRIGIARALV---LEPDLLICDEPVSALDVSIQAQILNLLVDLKRDLGLAYLFIS 515 Query: 890 HNLDVIK-TADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLKPML 940 H+L V++ AD + + G I+ SG + R L + Sbjct: 516 HDLSVVRYIADRVHVM------QAGRIVESGHHRDIWRAPQHPYTRTLLEAI 561 Score = 43.1 bits (100), Expect = 0.054, Method: Composition-based stats. Identities = 14/85 (16%), Positives = 34/85 (40%), Gaps = 5/85 (5%) Query: 614 KLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIA-QRQLNGATIAEPAP 672 +++ + ++ ++ + G + G SG GKS + + ++ G+ + Sbjct: 11 RVSFGAHHAVRGLSFDIAQGETLALVGESGCGKSATALSLMRLVPTPGRVTGSLRFDGRD 70 Query: 673 YRDIQGLEHFD----KVIDIDQSPI 693 D+ E D ++ I Q P+ Sbjct: 71 LLDLSPREIRDIRGRQISMIFQEPM 95 >UniRef50_B8F5L6 ABC transporter, ATP-binding protein n=6 Tax=Proteobacteria RepID=B8F5L6_HAEPS Length = 531 Score = 246 bits (629), Expect = 2e-63, Method: Composition-based stats. Identities = 83/523 (15%), Positives = 169/523 (32%), Gaps = 94/523 (17%) Query: 423 VENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKIL---KEIGDRLKFLVNVGLN--Y 477 + + I + F + + +L + L L V + Sbjct: 88 LRGDRIGMIFQEPMTSLNPFMRIGEQVAEAVSTHNPLLSKQQAHEKALAMLQKVKIPDAE 147 Query: 478 LTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHL-RD 536 + SGG+ QRI +A I + + DEP+ L +L + L D Sbjct: 148 KKMVCYPHEFSGGQLQRIMIAMAIINK--PDLLIADEPTTALDVTTQAEILDLMHDLQAD 205 Query: 537 LGNTVIVVEHDEDAI-RAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGK 595 +G +I++ HD + + +D V + GE++ G E + P+ + Sbjct: 206 MGMAIILISHDLRLVHKYSDDVCVM------QNGEIIERGNTEEVFKNPQHPYTIELLTP 259 Query: 596 RKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLF 655 ++ + D+ L + LF GK T + + + Sbjct: 260 IPSDL-------KHQVAENAPQLITTENVDIDYILKLNLF---------GKPTKVFNAVK 303 Query: 656 PIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELF 715 I+ G T+ + S +GR A Y G + F Sbjct: 304 NISLELKVGETLGIVGESGSGK-------------STLGRAIMQILA-YRG-----KIAF 344 Query: 716 AGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRET 775 A + ++M F + Sbjct: 345 ADQEIAALSNEQRQAL----------------KKDMQMVFQDPFNSLSPR---------- 378 Query: 776 LEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEA 835 T+ E++ + + ++TL +V L+ + + SGG+ Sbjct: 379 -------LTVGEIIGEGLSVHYPQMSKEERRQKVMKTLEEVNLSPSMINRYPHEFSGGQR 431 Query: 836 QRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQ-GNTIVVIEHNLDV 894 QR+ +AR + +LDEPT+ L + ++++L+ L+ + G + + I H+L V Sbjct: 432 QRIAIARAII---LEPKFVLLDEPTSALDRSTQLTVVELLNNLQRKYGLSYIFISHDLAV 488 Query: 895 IKT-ADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFL 936 ++ ++ ++ + GE++ G + + E + L Sbjct: 489 VRALSNRVIVM------SKGEVVEQGEAKQIFEQPKDEYTKRL 525 Score = 129 bits (325), Expect = 5e-28, Method: Composition-based stats. Identities = 97/618 (15%), Positives = 195/618 (31%), Gaps = 136/618 (22%) Query: 11 THNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQFLSLMEK 70 H +++++ + + + + + G SGSGKS S Q L Sbjct: 20 VHAVRSVSFSVEKGQTLAIVGESGSGKS-----------------VTSMSIMQLLPH--- 59 Query: 71 PDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRL----LFARVGEPRCPDHDVP 126 ++ S++ I E D LR + + G+ P Sbjct: 60 -----------------NIVTYGENSSI--IFEGQDILRFSDKQMQSLRGDRIGMIFQEP 100 Query: 127 LAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARIDGEVCDL 186 + + + +++ LL+ ++ H K L L V Sbjct: 101 MTSLNPFMRIGEQVAEAVSTHNPLLS-----KQQAHEKALAMLQK-----------VKIP 144 Query: 187 SDPPKLELQKKHTIEVVVDRFKVRDDLTQR----LAESFETALELSGGTAVVADMDDPKA 242 K+ + R + + + +A+ TAL+++ ++ M D +A Sbjct: 145 DAEKKMVCYPHEFSGGQLQRIMIAMAIINKPDLLIADEPTTALDVTTQAEILDLMHDLQA 204 Query: 243 EELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPELSL 302 G ++ + L + + D + + Sbjct: 205 ------------DMGMAIILISHD----------------LRLVHKYSDDVCVMQNGEII 236 Query: 303 AGGAIRGWDRRNFYYFQMLKSLADHYKFDVEAPWGSLSANVHKVVLYGSGK----ENIEF 358 G ++ K+ Y ++ P +++ V + + EN++ Sbjct: 237 ERG----------NTEEVFKNPQHPYTIELLTPI---PSDLKHQVAENAPQLITTENVDI 283 Query: 359 KYMNDRGDTSIRRHPFEGVLHN-MERRYKET-----ESSAVREELAK-------FISNRP 405 Y+ F V + +E + ET ES + + L + + Sbjct: 284 DYILKLNLFGKPTKVFNAVKNISLELKVGETLGIVGESGSGKSTLGRAIMQILAYRGKIA 343 Query: 406 CASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGD 465 A E L E R + + ++ G+ + + + Sbjct: 344 FADQEIAALSNEQRQAL--KKDMQMVFQDPFNSLSPRLTVGEIIGEGLSVHYPQMSKEER 401 Query: 466 R---LKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQR 522 R +K L V L+ ++R SGG+ QRI +A I L +LDEP+ L + Sbjct: 402 RQKVMKTLEEVNLSPSMINRYPHEFSGGQRQRIAIARAII--LEPKFVLLDEPTSALDRS 459 Query: 523 DNERLLGTLIHL-RDLGNTVIVVEHDEDAIR-AADHVIDIGPGAGVHGGEVVAEGPLEAI 580 ++ L +L R G + I + HD +R ++ VI + GEVV +G + I Sbjct: 460 TQLTVVELLNNLQRKYGLSYIFISHDLAVVRALSNRVIVMSK------GEVVEQGEAKQI 513 Query: 581 MAVPESLTGQYMSGKRKI 598 P+ + + + Sbjct: 514 FEQPKDEYTKRLIEASNL 531 Score = 44.2 bits (103), Expect = 0.024, Method: Composition-based stats. Identities = 17/82 (20%), Positives = 31/82 (37%), Gaps = 8/82 (9%) Query: 620 GNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQL----NGATIAEPAPYRD 675 + ++ V+ ++ G I G SGSGKS + + + N + I E Sbjct: 20 VHAVRSVSFSVEKGQTLAIVGESGSGKSVTSMSIMQLLPHNIVTYGENSSIIFEGQDILR 79 Query: 676 IQGLEHF----DKVIDIDQSPI 693 + D++ I Q P+ Sbjct: 80 FSDKQMQSLRGDRIGMIFQEPM 101 >UniRef50_Q11C74 Oligopeptide/dipeptide ABC transporter, ATPase subunit n=2 Tax=Bacteria RepID=Q11C74_MESSB Length = 691 Score = 246 bits (627), Expect = 4e-63, Method: Composition-based stats. Identities = 103/566 (18%), Positives = 193/566 (34%), Gaps = 83/566 (14%) Query: 418 ARHVYVENTPLPAISDMSIGHAME------FFNNLKLAGQRAKIAEKILKEIG------- 464 A + + + + D + F + + ++ E+I + I Sbjct: 75 AGRITIAGHDILTLPDRKLRRLRGPVVSMVFQDPMNALNPSIRVGEQIAEGIRYHTGAGK 134 Query: 465 -----DRLKFLVNVGLNY--LTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSI 517 ++ + V L + R LSGG+ QRI +A + L + +LDEP+ Sbjct: 135 AEAEARAIELIDQVKLPEPEDIVRRYPHQLSGGQQQRIVIAMALA--LEPALLILDEPTT 192 Query: 518 GLHQRDNERLLGTLIHLRDLGN-TVIVVEHDEDAI-RAADHVIDIGPGAGVHGGEVVAEG 575 GL +L + ++ N ++ + H+ + R D V + + G+++ EG Sbjct: 193 GLDVTTEATILDLITEIKQRSNVALLFISHNLGVVARMCDRVGVL------YAGDLIEEG 246 Query: 576 PLEAIMAVPESLTGQYMSGKRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLF 635 P ++ P + + + + P + LT +P G Sbjct: 247 PTAEVLQRPSHPYTRGLISAVPSIAGELEMVGIPGSLPDLT------------EVPKGCI 294 Query: 636 T---CITGVSGSGKSTLINDTLFPIAQRQ-------LNGATIAEPAPYRDIQGLEHFDKV 685 C ++ G++ + +T+ P + L + A R E ++ Sbjct: 295 FRARCSIAIAACGEAPVPMETVRPGHASRCLRWRDCLAELNPPQAAAVRAPLDGEKRLEI 354 Query: 686 IDIDQSPIGR------TPRSNPATYTGVFTPVR--ELFAGVPESRARGYTPGRF--SFNV 735 + +S G PR GV +R E A V ES + T GR + Sbjct: 355 DSVIRSFPGARRLPFLKPRPAVQALRGVSLDIRAGETLAVVGESGSGKSTLGRLVAGLDR 414 Query: 736 RGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKY-KGKTIHEVLDMTIE 794 G +G V + D + ++ + T+ E++ + Sbjct: 415 PAGGTIRFEGRDVTALS------RERTVDDQRAVQFIFQNPHSALNPHHTVEEIVGRPLR 468 Query: 795 EAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLY 854 R ++ L V L + ++ LSGGE QRV +AR + L Sbjct: 469 LYLGL-QGTELRRRIVEILRAVRLGERYMTRAPHELSGGEKQRVCIARAFA---AEPRLV 524 Query: 855 ILDEPTTGLHFADIQQLLDVLHKLRDQG---NTIVVIEHNLDVIK-TADWIVDLGPEGGS 910 + DEPT+ L + +L L L+ + + I H+L V++ AD + + Sbjct: 525 VCDEPTSALDISVQAAILQELQTLQRESAHRTAYMFITHDLGVVRQIADRVAVM------ 578 Query: 911 GGGEILVSGTPETVAECEASHTARFL 936 GEI+ G + L Sbjct: 579 YLGEIVELGATRDIFSRPQHPYTEAL 604 Score = 118 bits (295), Expect = 1e-24, Method: Composition-based stats. Identities = 47/245 (19%), Positives = 86/245 (35%), Gaps = 38/245 (15%) Query: 389 ESSAVREELAKFISNRPCASCEGTRLRREARHVYVENTPLPAIS-DMSIGHAMEF----- 442 ES + + L + ++ R + E + A+S + ++ Sbjct: 397 ESGSGKSTLGRLVAGLD---------RPAGGTIRFEGRDVTALSRERTVDDQRAVQFIFQ 447 Query: 443 --FNNLKLAGQRAKIAEKILK--------EIGDR-LKFLVNVGLNYLTLSRSAETLSGGE 491 + L +I + L+ E+ R ++ L V L ++R+ LSGGE Sbjct: 448 NPHSALNPHHTVEEIVGRPLRLYLGLQGTELRRRIVEILRAVRLGERYMTRAPHELSGGE 507 Query: 492 AQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLG---NTVIVVEHDE 548 QR+ +A A + V DEP+ L +L L L+ + + HD Sbjct: 508 KQRVCIARAFAAE--PRLVVCDEPTSALDISVQAAILQELQTLQRESAHRTAYMFITHDL 565 Query: 549 DAIR-AADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEVPKKRVPA 607 +R AD V + + GE+V G I + P+ + + P + Sbjct: 566 GVVRQIADRVAVM------YLGEIVELGATRDIFSRPQHPYTEALLAAVPELRPTRASRM 619 Query: 608 NPEKV 612 + V Sbjct: 620 RLQGV 624 Score = 72.3 bits (176), Expect = 8e-11, Method: Composition-based stats. Identities = 54/357 (15%), Positives = 105/357 (29%), Gaps = 101/357 (28%) Query: 587 LTGQYMSGKRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGK 646 + Q + I +P + + L ++ ++DVTL + G + G SGSGK Sbjct: 1 MIQQRLPTGTPIPLPDATLCVDG---LSISYGAAKVVRDVTLRIAPGEAYGLIGESGSGK 57 Query: 647 STLINDTLFPIAQRQLNGATIAEPAPYRDIQGLEHFDK-----VIDIDQSPIGRTPRSNP 701 ST+ + + + I + V + Q P+ Sbjct: 58 STIAFSVMGYLNGGTASAGRITIAGHDILTLPDRKLRRLRGPVVSMVFQDPMN------- 110 Query: 702 ATYTGVFTPVRELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYV 761 A P R ++ G+ EA + + + + Sbjct: 111 --------------ALNPSIRVGEQIAEGIRYHTGAGKAEAEARA------IELIDQVKL 150 Query: 762 PCDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYI 821 P + +RY + + + I + + +E A + L Sbjct: 151 PEPEDIVRRYPHQLSGGQQQRIVIA--MALALEPAL------------------LILDEP 190 Query: 822 RLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQ 881 G TT E T +LD++ +++ + Sbjct: 191 TTGLDVTT----------------------------EAT----------ILDLITEIKQR 212 Query: 882 GN-TIVVIEHNLDVI-KTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFL 936 N ++ I HNL V+ + D + L G+++ G V + + R L Sbjct: 213 SNVALLFISHNLGVVARMCDRVGVL------YAGDLIEEGPTAEVLQRPSHPYTRGL 263 >UniRef50_C7MY08 ATPase component of various ABC-type transport systems with duplicated ATPase domain protein n=5 Tax=Actinomycetales RepID=C7MY08_SACVD Length = 586 Score = 245 bits (626), Expect = 5e-63, Method: Composition-based stats. Identities = 93/527 (17%), Positives = 169/527 (32%), Gaps = 72/527 (13%) Query: 424 ENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIG--DRLKFLVNVGLNY--LT 479 + I + + + + I K+ ++ L VG+ Sbjct: 96 RGNDVAMIFQEPMTALNPMYTIGWQVREALLAHKDISKQAANKRAIELLDMVGIPEPEKR 155 Query: 480 LSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGN 539 + LSGG QR+ +A I + + DEP+ L +L L LRD N Sbjct: 156 FKQYPHQLSGGLRQRVVIAIAIAC--DPKVIIADEPTTALDVTVQAEILALLRKLRDTLN 213 Query: 540 T-VIVVEHDEDAI-RAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRK 597 T ++++ HD + AD V+ + + GE+V + P+ + P+ + + Sbjct: 214 TAIVLITHDMGVVADLADRVVVM------YQGEIVEQAPVHELFNNPQQEYTKRLLAAVP 267 Query: 598 I--EVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLF 655 + + P+ R + KV + ++ L + S Sbjct: 268 VLGQRPEGRRLLDTPKVEVVESKTDEAIRKAHEELKPYIDD----------SAPALKIEN 317 Query: 656 PIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELF 715 + + G A +E + + + +S G++ A +R L Sbjct: 318 LVLEYPGKGRQGKNRAVDDVSLHIERGEILGLVGESGSGKSTVGRCA--------IRLLK 369 Query: 716 AGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRET 775 G S + F + Sbjct: 370 PTSGTVSIAGTDITTMS--------HKKLRPLRRYFSIVFQDPASTLDPKMTI------- 414 Query: 776 LEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEA 835 G++I E L + + R L V L+ + LSGG+ Sbjct: 415 ------GESIAEPLVL-----HKILSGKELTDRVTDLLDKVQLSGHYRNRYPHELSGGQR 463 Query: 836 QRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQ-GNTIVVIEHNLDV 894 QR+ +AR L+ L I DEPT+ L + ++LD+ L+ + I H+L V Sbjct: 464 QRIAIARALA---LNPKLLIADEPTSALDVSVQAKILDLFLDLQQHLQFACLFISHDLAV 520 Query: 895 IK-TADWIVDLGPEGGSGGGEILVSGTPETVAECEAS-HTARFLKPM 939 + AD + + G+++ GT E V +T R L Sbjct: 521 VDLLADRVAVMQR------GKLVEVGTREQVLHAPQQEYTKRLLSAA 561 Score = 137 bits (345), Expect = 2e-30, Method: Composition-based stats. Identities = 60/381 (15%), Positives = 123/381 (32%), Gaps = 63/381 (16%) Query: 283 LGVQQYFDPDRVIQNPELSLAGGAIR-GWDRRNFYYFQMLKSLADHYKFD------VEAP 335 +GV V+ + + ++ Y + L + ++ P Sbjct: 223 MGVVADLADRVVVMYQGEIVEQAPVHELFNNPQQEYTKRLLAAVPVLGQRPEGRRLLDTP 282 Query: 336 ------------WGSLSANVHKVVLYGSGKENIEFKYMNDRGDTSI-RRHPFEGVLHNME 382 + + + IE + G + + V ++E Sbjct: 283 KVEVVESKTDEAIRKAHEELKPYIDDSAPALKIENLVLEYPGKGRQGKNRAVDDVSLHIE 342 Query: 383 RRY---KETESSAVREELAKFISNRPCASCEGTRLRREARHVYVENTPLPAISDMSIGHA 439 R ES + + + + C L+ + V + T + +S + Sbjct: 343 RGEILGLVGESGSGKSTVGR---------CAIRLLKPTSGTVSIAGTDITTMSHKKLRPL 393 Query: 440 MEFFNNLKLAGQRA---------KIAEKIL-------KEIGDRL-KFLVNVGLNYLTLSR 482 +F+ + IAE ++ KE+ DR+ L V L+ +R Sbjct: 394 RRYFSIVFQDPASTLDPKMTIGESIAEPLVLHKILSGKELTDRVTDLLDKVQLSGHYRNR 453 Query: 483 SAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRD-LGNTV 541 LSGG+ QRI +A + L + + DEP+ L ++L + L+ L Sbjct: 454 YPHELSGGQRQRIAIARALA--LNPKLLIADEPTSALDVSVQAKILDLFLDLQQHLQFAC 511 Query: 542 IVVEHDEDAIR-AADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEV 600 + + HD + AD V + G++V G E ++ P+ + + + Sbjct: 512 LFISHDLAVVDLLADRVAVMQR------GKLVEVGTREQVLHAPQQEYTKRLLSAAPVAD 565 Query: 601 P----KKRVPANPEKVLKLTG 617 P ++R +V + Sbjct: 566 PVLQAERRRAWEEGRVAPVKD 586 Score = 44.2 bits (103), Expect = 0.022, Method: Composition-based stats. Identities = 16/83 (19%), Positives = 25/83 (30%), Gaps = 5/83 (6%) Query: 616 TGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQ-RQLNGATIAEPAPYR 674 +K + + G I G SGSGKS + + + G Sbjct: 26 EDGVVEAVKGIGFDVAPGEILAIVGESGSGKSVTSMSVPGLLPKTAHIQGERRLGAVDLS 85 Query: 675 DIQGLEHF----DKVIDIDQSPI 693 + E + V I Q P+ Sbjct: 86 HMTSKELRKHRGNDVAMIFQEPM 108 >UniRef50_D0KZE5 ABC transporter related protein n=228 Tax=cellular organisms RepID=D0KZE5_HALNC Length = 564 Score = 245 bits (626), Expect = 6e-63, Method: Composition-based stats. Identities = 93/529 (17%), Positives = 167/529 (31%), Gaps = 84/529 (15%) Query: 416 REARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAE--KILKEIGDRLKFLVNV 473 + + + I + + + E + +++L V Sbjct: 105 PQHALRRIRGREISMIFQEPMTAFNPLKTIGEQIAEVTIAHEGLTRAEAQRRAIEWLERV 164 Query: 474 GLN--YLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTL 531 L LSGG+ QR +A + + + DEP+ L +++ L Sbjct: 165 RLPDPEQRARVFPHQLSGGQRQRAMIAMALVCR--PKLLIADEPTTALDVTLQSQMMDLL 222 Query: 532 IHLRDL-GNTVIVVEHDEDAIRA-ADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTG 589 L+ G ++++ HD + +R AD V + G +V G + I P Sbjct: 223 TELQQEMGMALLLITHDLNLVRRYADAVAVM------KQGRIVERGEVGEIFLSPWHPYT 276 Query: 590 QYMSGKRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTL 649 Q + P + N +VL G N +V P Sbjct: 277 QQLLAATPQPEPLPVISMNAPEVL------GANDLNVEFKQPR----------------- 313 Query: 650 INDTLFPIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFT 709 P +R ++ I + + + IG + + Sbjct: 314 ---QFAPGERRYWWLSSSVPFQALSHIDISVSAGETLGV----IGESGSGKSTLALALLR 366 Query: 710 PVRELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGK 769 + G S E+ +++ F + Sbjct: 367 LIH----SRGNILLEGRAVEHLS--------ESEFRPLRRHIQIVFQDPFGSLSPR---- 410 Query: 770 RYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATT 829 TI E++ + AR + + VGL + L + Sbjct: 411 -------------MTIGELVGEGLRVHEPRLAKNEYAARVQEAMASVGLGGVSLHRYPHE 457 Query: 830 LSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQ-GNTIVVI 888 SGG+ QR+ +AR L R + ILDEPT+ L +Q+L +L L+++ G T V I Sbjct: 458 FSGGQRQRIAIARALILR---PRILILDEPTSALDATVQKQILALLRTLQEELGLTYVFI 514 Query: 889 EHNLDVIK-TADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFL 936 H+L V++ A ++ L G ++ +G TV E + R L Sbjct: 515 THDLRVVRAMAHRVMVLYR------GAVVETGATATVFESPSHAYTRQL 557 Score = 128 bits (322), Expect = 9e-28, Method: Composition-based stats. Identities = 51/218 (23%), Positives = 81/218 (37%), Gaps = 34/218 (15%) Query: 726 YTPGRFSF---NVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKYKG 782 YT G +F NV A + ++ M F + Sbjct: 89 YTSGSITFDGQNVLTMPQHALRRIRGREISMIFQEPMTAFNPL----------------- 131 Query: 783 KTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQS--ATTLSGGEAQRVKL 840 KTI E + + A E A R ++ L V L LSGG+ QR + Sbjct: 132 KTIGEQIAE-VTIAHEGLTRAEAQRRAIEWLERVRLPDPEQRARVFPHQLSGGQRQRAMI 190 Query: 841 ARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQ-GNTIVVIEHNLDVI-KTA 898 A L R L I DEPTT L Q++D+L +L+ + G +++I H+L+++ + A Sbjct: 191 AMALVCR---PKLLIADEPTTALDVTLQSQMMDLLTELQQEMGMALLLITHDLNLVRRYA 247 Query: 899 DWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFL 936 D + + G I+ G + + L Sbjct: 248 DAVAVMKQ------GRIVERGEVGEIFLSPWHPYTQQL 279 Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats. Identities = 41/174 (23%), Positives = 72/174 (41%), Gaps = 13/174 (7%) Query: 426 TPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILK--EIGDRL-KFLVNVGLNYLTLSR 482 + + G +L G+ ++ E L E R+ + + +VGL ++L R Sbjct: 394 RHIQIVFQDPFGSLSPRMTIGELVGEGLRVHEPRLAKNEYAARVQEAMASVGLGGVSLHR 453 Query: 483 SAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDL-GNTV 541 SGG+ QRI +A + L + +LDEP+ L +++L L L++ G T Sbjct: 454 YPHEFSGGQRQRIAIARALI--LRPRILILDEPTSALDATVQKQILALLRTLQEELGLTY 511 Query: 542 IVVEHDEDAIR-AADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSG 594 + + HD +R A V+ + GA VV G + P + + Sbjct: 512 VFITHDLRVVRAMAHRVMVLYRGA------VVETGATATVFESPSHAYTRQLIA 559 >UniRef50_B9JQI4 ABC transporter, ATP-binding protein n=1 Tax=Agrobacterium radiobacter K84 RepID=B9JQI4_AGRRK Length = 558 Score = 244 bits (624), Expect = 1e-62, Method: Composition-based stats. Identities = 99/529 (18%), Positives = 169/529 (31%), Gaps = 92/529 (17%) Query: 414 LRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKI-AEKILKEIGDRLKFLVN 472 L A + + I + + + K E L + Sbjct: 88 LGETALR-RLRGARIGYIFQEPMTALNPLLTIGRQIAEALKAHGHPAPPERIAELLAAMR 146 Query: 473 VGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLI 532 + R LSGG+ QR+ +A + G + + DEP+ L +L ++ Sbjct: 147 LPDPGTLRRRYPHELSGGQRQRVAIAIAMACG--PDLLIADEPTTALDVTTQAEILRLIL 204 Query: 533 HLRDL-GNTVIVVEHDEDAIR-AADHVIDIGPGAGVHGGEVVAEGPLEAIMAVP-ESLTG 589 LR G V+ + HD +R AD ++ + GE+V G E +++ P T Sbjct: 205 DLRARRGLAVLFITHDFGVVRDIADRIVVM------QNGEIVEHGNAEQLLSAPTHPYTR 258 Query: 590 QYMSGKRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTL 649 + ++ K+E + + ++ L+L G + Sbjct: 259 RLLAAVPKLEARRSPLASDLPAALELEGIHKTHFTRRHF--------------------- 297 Query: 650 INDTLFPIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFT 709 L A A A L + V + +S G++ T Sbjct: 298 ------------LGSARPATQALGGIDLTLRIGETVALVGESGSGKSTLGQVITGL---- 341 Query: 710 PVRELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGK 769 R R S G + + V+M F + + Sbjct: 342 ------------VERDAGTFRLSGEAIGRARDLFTRERRPAVQMVFQDPQSSLNPRHSIR 389 Query: 770 RYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATT 829 R +T + A R ++ L+ +GL + Sbjct: 390 RI-------------------LTEPVLQTGLSKEEAETRMMELLLRIGLDPSSADRKPHA 430 Query: 830 LSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLR-DQGNTIVVI 888 SGG+ QR+ LAR L R L + DEP + L + Q+LD+L +L+ D G ++ I Sbjct: 431 FSGGQRQRIGLARALMPR---PRLLVADEPVSALDVSVQAQVLDLLAELQSDLGLAMLFI 487 Query: 889 EHNLDV-IKTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFL 936 H+L V + AD I + G I+ + S AR L Sbjct: 488 THDLRVAARVADRIAVMQH------GVIVEEAATADLLRTPRSTYARAL 530 Score = 130 bits (326), Expect = 4e-28, Method: Composition-based stats. Identities = 47/204 (23%), Positives = 80/204 (39%), Gaps = 18/204 (8%) Query: 745 GDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKYKGKTIHEVLDMTI----EEAREFF 800 G V + + F + + + +R + ++ +TI EA + Sbjct: 70 GLRVERGNLRFAGEDVLSLGETALRRLRGARIGYIFQEPMTALNPLLTIGRQIAEALKAH 129 Query: 801 DAVPALARKLQTLMDVGLTYI--RLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDE 858 R + L + L + LSGG+ QRV +A ++ G L I DE Sbjct: 130 GHPAPPERIAELLAAMRLPDPGTLRRRYPHELSGGQRQRVAIAIAMA---CGPDLLIADE 186 Query: 859 PTTGLHFADIQQLLDVLHKLRD-QGNTIVVIEHNLDVIK-TADWIVDLGPEGGSGGGEIL 916 PTT L ++L ++ LR +G ++ I H+ V++ AD IV + GEI+ Sbjct: 187 PTTALDVTTQAEILRLILDLRARRGLAVLFITHDFGVVRDIADRIVVM------QNGEIV 240 Query: 917 VSGTPETVAECEAS-HTARFLKPM 939 G E + +T R L + Sbjct: 241 EHGNAEQLLSAPTHPYTRRLLAAV 264 Score = 125 bits (313), Expect = 1e-26, Method: Composition-based stats. Identities = 60/328 (18%), Positives = 104/328 (31%), Gaps = 26/328 (7%) Query: 283 LGVQQYFDPDRVIQNPELSLAGG-AIRGWDRRNFYYFQMLKSLADHYKFDVEAPWGSLSA 341 GV + V+ + G A + Y + L + + L A Sbjct: 221 FGVVRDIADRIVVMQNGEIVEHGNAEQLLSAPTHPYTRRLLAAVPKLEARRSPLASDLPA 280 Query: 342 NVHKVVLYGSGKENIEFKYMNDRGDTSIRRHPFEGV---LHNMERRYKETESSAVREELA 398 L G F + G G+ L E ES + + L Sbjct: 281 A-----LELEGIHKTHFTRRHFLGSARPATQALGGIDLTLRIGETVALVGESGSGKSTLG 335 Query: 399 KFISNRPCASCEGTRLRREA----RHVYVENTP--LPAISDMSIGHAMEFFNNLKLAGQR 452 + I+ RL EA R ++ + + + ++ + Sbjct: 336 QVITGLVERDAGTFRLSGEAIGRARDLFTRERRPAVQMVFQDPQSSLNPRHSIRRILTEP 395 Query: 453 AKIAEKILKEIGDRL-KFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYV 511 +E R+ + L+ +GL+ + R SGG+ QRI LA + + V Sbjct: 396 VLQTGLSKEEAETRMMELLLRIGLDPSSADRKPHAFSGGQRQRIGLARALM--PRPRLLV 453 Query: 512 LDEPSIGLHQRDNERLLGTLIHLR-DLGNTVIVVEHDEDA-IRAADHVIDIGPGAGVHGG 569 DEP L ++L L L+ DLG ++ + HD R AD + + G Sbjct: 454 ADEPVSALDVSVQAQVLDLLAELQSDLGLAMLFITHDLRVAARVADRIAVM------QHG 507 Query: 570 EVVAEGPLEAIMAVPESLTGQYMSGKRK 597 +V E ++ P S + + Sbjct: 508 VIVEEAATADLLRTPRSTYARALIAAVP 535 Score = 46.9 bits (110), Expect = 0.004, Method: Composition-based stats. Identities = 36/167 (21%), Positives = 50/167 (29%), Gaps = 23/167 (13%) Query: 617 GARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQ-----RQLNGATIAEPA 671 G R + D TL++ G CI G SGSGKS L + + + N E Sbjct: 26 GERELAVHDATLSIARGEVLCIVGESGSGKSVLASAIAGLLPGNGLRVERGNLRFAGEDV 85 Query: 672 PYRDIQGLEHFD--KVIDIDQSP---------IGRTPRSNPATYTGVFTPVR--ELFAGV 718 L ++ I Q P IGR + P R EL A + Sbjct: 86 LSLGETALRRLRGARIGYIFQEPMTALNPLLTIGRQIAEALKAHGHPAPPERIAELLAAM 145 Query: 719 PESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQ 765 G R I + M PD+ + + Sbjct: 146 RLPDPGTLRRRYPHELSGGQRQRV-----AIAIAMACGPDLLIADEP 187 >UniRef50_D1VG07 Oligopeptide/dipeptide ABC transporter, ATPase subunit n=1 Tax=Frankia sp. EuI1c RepID=D1VG07_9ACTO Length = 647 Score = 244 bits (623), Expect = 1e-62, Method: Composition-based stats. Identities = 107/553 (19%), Positives = 181/553 (32%), Gaps = 57/553 (10%) Query: 417 EARHVYVENTPLPAISDM---SIGHAMEFFNNLKLAGQRAKIA-EKILKEIGDRLKFLVN 472 EAR V + + S+ + + ++ + + E L V Sbjct: 100 EARWRSVRGRRIGLVLQDALVSLDPLRTVGAEVAETPRVHRLLDRRAVPERVRSLLAAVG 159 Query: 473 VGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLI 532 + + + LSGG QR +AS I + + DEP+ L R+L L Sbjct: 160 IDDPDRRARQYSHQLSGGLRQRALIASAI--SADPELLLADEPTTALDVTVQARVLDLLG 217 Query: 533 HLRDLGNTVIVVEHDEDAIR-AADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQY 591 R G +++V HD + AD V + +GG +V GP A++ P + Sbjct: 218 GFRADGTAIVLVSHDLAVVAGLADQVAVM------YGGRIVEHGPTAAVLGRPRHPYTRA 271 Query: 592 MSGKRKIEVPK----------KRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCI-TG 640 + + P+ P LP + G Sbjct: 272 LLAAVPVGRPRGSRLSAPASVAPGPPASPDACPYAARCPLADDRCRTKLPPLSGPAVAAG 331 Query: 641 VSGSGKS--------TLINDTLF---PIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDI- 688 S +G S ++TL L + P+ + +V I Sbjct: 332 PSAAGSSAPGSAVPVEAGHETLCWYPGRVPAALAEPVVPVPSAREPDRSGRPLVEVASIS 391 Query: 689 --DQSPIGRTPRSNPATYTGVFTPVRELFAGVPESRARGYTPGRFSFNVRGGRCEACQGD 746 + P G R E V ES + T R G E G Sbjct: 392 KGFRDPGG--ERRLAVDDVSFTLSPGEALGVVGESGSGKTTVARIVL----GLVEPDAGS 445 Query: 747 GVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKYKGK-TIHEVLDMTIEEAREFFDAVPA 805 + E + + + + + + T+ +++ + A Sbjct: 446 VRLDGEAWSGRPEAERRPRRRRVQAVYQDPFGSFDPRYTVEKIIGEAVATA-GVPRGPAR 504 Query: 806 LARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHF 865 R + L VGL G+ LSGG+ QRV +AR L+ + + DEP + L Sbjct: 505 RERVAELLAAVGLPDDLAGRRPLELSGGQRQRVAIARALA---PSPDILVCDEPVSALDV 561 Query: 866 ADIQQLLDVLHKLR-DQGNTIVVIEHNLDVIKT-ADWIVDLGPEGGSGGGEILVSGTPET 923 + Q+LD+L LR D G ++ I H+L V+ +D ++ + G ++ SG E Sbjct: 562 SVQAQILDLLLGLRHDTGVALLFISHDLGVVHHVSDRLLVM------KDGRVVESGPTER 615 Query: 924 VAECEASHTARFL 936 + R L Sbjct: 616 IFARPEHPYTREL 628 Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats. Identities = 49/224 (21%), Positives = 80/224 (35%), Gaps = 18/224 (8%) Query: 389 ESSAVREELAKFISNRPCASCEGTRLRREA------RHVYVENTPLPAISDMSIGHAMEF 442 ES + + +A+ + RL EA + A+ G Sbjct: 423 ESGSGKTTVARIVLGLVEPDAGSVRLDGEAWSGRPEAERRPRRRRVQAVYQDPFGSFDPR 482 Query: 443 FNNLKLAGQRAKIAEKIL-KEIGDRLKFLVN-VGLNYLTLSRSAETLSGGEAQRIRLASQ 500 + K+ G+ A +R+ L+ VGL R LSGG+ QR+ +A Sbjct: 483 YTVEKIIGEAVATAGVPRGPARRERVAELLAAVGLPDDLAGRRPLELSGGQRQRVAIARA 542 Query: 501 IGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLR-DLGNTVIVVEHDEDAIRA-ADHVI 558 + + V DEP L ++L L+ LR D G ++ + HD + +D ++ Sbjct: 543 LA--PSPDILVCDEPVSALDVSVQAQILDLLLGLRHDTGVALLFISHDLGVVHHVSDRLL 600 Query: 559 DIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEVPK 602 + G VV GP E I A PE + + Sbjct: 601 VMKD------GRVVESGPTERIFARPEHPYTRELLAAVPRPPRA 638 Score = 46.1 bits (108), Expect = 0.007, Method: Composition-based stats. Identities = 18/105 (17%), Positives = 29/105 (27%), Gaps = 7/105 (6%) Query: 618 ARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAEPAPYRDIQ 677 +DV+ ++ G I G SGSGKS + + + GA Sbjct: 38 GPVRAARDVSFSVRRGECLAIVGESGSGKSVTLRALVGLTGGSAVLGARTLSFDGEDLSG 97 Query: 678 GLEHF------DKVIDIDQSP-IGRTPRSNPATYTGVFTPVRELF 715 E ++ + Q + P V L Sbjct: 98 AGEARWRSVRGRRIGLVLQDALVSLDPLRTVGAEVAETPRVHRLL 142 >UniRef50_B9K4U3 ABC transporter nucleotide binding/ATPase protein n=1 Tax=Agrobacterium vitis S4 RepID=B9K4U3_AGRVS Length = 564 Score = 244 bits (623), Expect = 1e-62, Method: Composition-based stats. Identities = 101/540 (18%), Positives = 174/540 (32%), Gaps = 94/540 (17%) Query: 410 EGTR---LRREARHVYVENTPLPAISDMSIGHAMEFFN-NLKLAGQRAKIAEKILKEIGD 465 +G R L +A + + + + + +L + + Sbjct: 79 QGERIDNLGDKALE-TLRGRRIGTVFQDPLVSLNPLYTIGQQLIETIRRHLPLDQGQARQ 137 Query: 466 RLKFLVNVGLNYLTLSR---SAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQR 522 R L+ R SGG QR+ +A + A + + DEP+ L Sbjct: 138 RAIDLLREVGIDEPARRLDAYPHEFSGGMRQRVVIALAVAA--DPDLLIADEPTSALDVS 195 Query: 523 DNERLLGTLIHL-RDLGNTVIVVEHDEDAI-RAADHVIDIGPGAGVHGGEVVAEGPLEAI 580 +++ L L + G V+++ HD + A+ V+ + H G +V G + + Sbjct: 196 VQAQIIALLKSLCQRRGLAVLLITHDMGVVAEIANRVVVM------HKGRIVESGSVAEV 249 Query: 581 MAVPESLTGQYMSGKRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITG 640 + P+ + + +P R V G + G Sbjct: 250 IGSPKHDYTRALIAA----IPSIRRKNTRASVAS-----------------KGDLVKVEG 288 Query: 641 VSGSGKSTLINDTLFPIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSN 700 LI D P G + + R + L + V IG Sbjct: 289 --------LIRDFALP------GGGGLPFFSKNRKQRSLRAVNDVSF----SIG------ 324 Query: 701 PATYTGVFTPVRELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIY 760 + FA V ES + T R + G + G + + L Sbjct: 325 ----------EGQTFALVGESGSGKSTIARIVVGLLGAQ------AGKVTIGGTVLGQDK 368 Query: 761 VPCDQCKGKRY-NRETLEIKYKGK-TIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGL 818 P KG + + I +++ I D R L V L Sbjct: 369 AP--ALKGAVQMIFQDPYASLNSRWRIGDIIAEPIRTLGLETDNRVIEQRVTDLLEKVRL 426 Query: 819 TYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKL 878 + SGG+ QR+ +AR L+ R + DEPT+ L + Q+L+++ L Sbjct: 427 DPDARSRFPHEFSGGQRQRIAIARALASR---PRFIVCDEPTSALDVSVQAQVLELMASL 483 Query: 879 RDQ-GNTIVVIEHNLDVIK-TADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFL 936 + + G T ++I HNL V++ AD + L G ++ G E V E R L Sbjct: 484 QAEFGLTYLLISHNLAVVRQMADRVGVL------KNGVLVEEGPVEEVFERPQHDYTRML 537 Score = 137 bits (346), Expect = 2e-30, Method: Composition-based stats. Identities = 60/340 (17%), Positives = 115/340 (33%), Gaps = 44/340 (12%) Query: 283 LGVQQYFDPDRVIQNPELSLAGGAIR--GWDRRNFYYFQMLKSLADHYKFDVEAPWG--- 337 +GV V+ + + G++ ++ Y ++ ++ + + A Sbjct: 222 MGVVAEIANRVVVMHKGRIVESGSVAEVIGSPKHDYTRALIAAIPSIRRKNTRASVASKG 281 Query: 338 SLSANV---HKVVLYGSGKENIEFKYMNDRGDTSIRRHPFEGVLHNMERRYKETESSAVR 394 L L G G K R ++ F + + ES + + Sbjct: 282 DLVKVEGLIRDFALPGGGGLPFFSKNRKQRSLRAVNDVSFS--IGEGQTFALVGESGSGK 339 Query: 395 EELAKFISNRPCASCEGTRLRREARHVYVENTPLPAISDMSIGHAME-FFNNLKLAGQRA 453 +A+ + L +A V + T L ++ A++ F + + Sbjct: 340 STIARIVVGL---------LGAQAGKVTIGGTVLGQDKAPALKGAVQMIFQDPYASLNSR 390 Query: 454 KIAEKILKE-------------IGDRL-KFLVNVGLNYLTLSRSAETLSGGEAQRIRLAS 499 I+ E I R+ L V L+ SR SGG+ QRI +A Sbjct: 391 WRIGDIIAEPIRTLGLETDNRVIEQRVTDLLEKVRLDPDARSRFPHEFSGGQRQRIAIAR 450 Query: 500 QIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDL-GNTVIVVEHDEDAIR-AADHV 557 + + V DEP+ L ++L + L+ G T +++ H+ +R AD V Sbjct: 451 ALASR--PRFIVCDEPTSALDVSVQAQVLELMASLQAEFGLTYLLISHNLAVVRQMADRV 508 Query: 558 IDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRK 597 + G +V EGP+E + P+ + + Sbjct: 509 GVL------KNGVLVEEGPVEEVFERPQHDYTRMLIAAVP 542 Score = 135 bits (339), Expect = 1e-29, Method: Composition-based stats. Identities = 45/184 (24%), Positives = 77/184 (41%), Gaps = 17/184 (9%) Query: 764 DQCKGKR--YNRETLEIKYKGK-TIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTY 820 + +G+R + + TI + L TI D A R + L +VG+ Sbjct: 92 ETLRGRRIGTVFQDPLVSLNPLYTIGQQLIETIRRHLPL-DQGQARQRAIDLLREVGIDE 150 Query: 821 I--RLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKL 878 RL SGG QRV +A ++ L I DEPT+ L + Q++ +L L Sbjct: 151 PARRLDAYPHEFSGGMRQRVVIALAVA---ADPDLLIADEPTSALDVSVQAQIIALLKSL 207 Query: 879 -RDQGNTIVVIEHNLDVI-KTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFL 936 + +G +++I H++ V+ + A+ +V + G I+ SG+ V R L Sbjct: 208 CQRRGLAVLLITHDMGVVAEIANRVVVMHK------GRIVESGSVAEVIGSPKHDYTRAL 261 Query: 937 KPML 940 + Sbjct: 262 IAAI 265 Score = 46.9 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 27/146 (18%), Positives = 47/146 (32%), Gaps = 9/146 (6%) Query: 592 MSGKRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLIN 651 MS P R+ + G + D++LT+ G + G SG+GKS Sbjct: 1 MSLSLSKTKPVLRINSLSVDFPGFDG-NFRAVDDLSLTIARGEVLGVIGESGAGKSMTGA 59 Query: 652 DTLFPI--AQRQLNGATIAEPAPYRDIQGLE----HFDKVIDIDQSP-IGRTPRSNPATY 704 + I R +G + ++ ++ + Q P + P Sbjct: 60 AIIGLIDPPGRITSGEIHLQGERIDNLGDKALETLRGRRIGTVFQDPLVSLNPLYTIGQQ 119 Query: 705 TGVFTPVRELFAGVPESRARGYTPGR 730 + T R L ++R R R Sbjct: 120 L-IETIRRHLPLDQGQARQRAIDLLR 144 >UniRef50_O26254 Methyl coenzyme M reductase system, component A2 homolog n=8 Tax=Euryarchaeota RepID=O26254_METTH Length = 590 Score = 243 bits (621), Expect = 2e-62, Method: Composition-based stats. Identities = 111/524 (21%), Positives = 196/524 (37%), Gaps = 57/524 (10%) Query: 425 NTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTLSRSA 484 ++ ++ + + + + + E G+ L+ V A Sbjct: 113 QRSFGLWAETALENVIRKLYATRYGDESMTDFDYASDEFGEDAMELLRVVGLEHKADHFA 172 Query: 485 ETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHL-RDLGNTVIV 543 LSGGE QR+ +A Q+ + +LDEP+ R + +L + ++ R+LG TV++ Sbjct: 173 PVLSGGEKQRLIMARQLAKK--PRVLLLDEPATMSCPRTKQEILDAIKNINRELGVTVVL 230 Query: 544 VEHDEDAIR-AADHVIDIGPGAGVHGGEVVAEGPLEAIMAV---PESLTGQYMSGKRKIE 599 V H + AD V+ + GG +V EG +I+ +Y G R E Sbjct: 231 VSHLPEVHEYLADRVVLM------DGGRIVDEGEPSSIIGRFLEDIEPPVEYTPGARGKE 284 Query: 600 VPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQ 659 + + R ++ + L G + DV L + G I G SG+GK+ L+ Sbjct: 285 ILRVR--GLGKRFVLLKGGAVLEMSDVNLDIAEGEMVSIIGPSGAGKTVLLRMI------ 336 Query: 660 RQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVP 719 G + + E + + + + R + + + FA V Sbjct: 337 ---GGLDLPDEGTVEFRLNSEWVN----MHEPGVKRMGIRRKMGF------MHQEFALVH 383 Query: 720 ESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKG-KRYNRETLEI 778 + R R EA + + + L +Y D + RY E L + Sbjct: 384 HATIRSQIASRLGVKGEHVVAEAKKRADELGISDMVLDVLYQLTDLPETEARYRLEKLGL 443 Query: 779 KYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRV 838 E+L EE F + L L + + LSGGE R Sbjct: 444 S------PEIL----EELFPSFPDSEVKRYAEPIFRALDLPLSILDRRSYELSGGERVRA 493 Query: 839 KLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLR-DQGNTIVVIEHNLDVIKT 897 LA L+ R + ILDEP L ++ + + L ++ + G TI+++ H++D I+ Sbjct: 494 TLALVLASR---PDVLILDEPFGDLDPITLRMVSNSLKRINMEFGTTIIMVSHHVDFIRE 550 Query: 898 ADWIVDLGPEGGSGGGEILVSGTPETVAEC--EASHTARFLKPM 939 + G I++ G P + + E SH AR+L+ + Sbjct: 551 LSTRAVM-----VEDGRIVMDGEPGELCDEFVERSH-ARYLQRV 588 Score = 45.8 bits (107), Expect = 0.008, Method: Composition-based stats. Identities = 24/110 (21%), Positives = 37/110 (33%), Gaps = 8/110 (7%) Query: 617 GARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLF--PIAQRQLNGATIAEPAPYR 674 G L DV L + G I G+SGSGK+TL+ P ++ + A Sbjct: 38 GDEFRALSDVNLEVAEGEILGILGMSGSGKTTLLRILRGVEPFDSGRITLDDVTVEADSS 97 Query: 675 DIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESRAR 724 + K Q G T + +R+L+A + Sbjct: 98 QYYFSKLKKKTAIHLQRSFG------LWAETALENVIRKLYATRYGDESM 141 >UniRef50_A5WE13 ABC transporter related n=7 Tax=Moraxellaceae RepID=A5WE13_PSYWF Length = 578 Score = 242 bits (619), Expect = 3e-62, Method: Composition-based stats. Identities = 88/521 (16%), Positives = 168/521 (32%), Gaps = 89/521 (17%) Query: 423 VENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNVGL---NYLT 479 V + + + K + +++ +I R+ L+N Sbjct: 130 VRGAKIAMVFQEPMTALNPLHTVGKQIAESLRLSGLPKSQIKARIIELLNDVNIKQPEQK 189 Query: 480 LSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDL-G 538 L+R LSGG+ QR+ +A + + + DEP+ L +L L L+ G Sbjct: 190 LNRYPHELSGGQRQRVMIAMALAQN--PDVLIADEPTTALDVSLQHEILELLNRLKQQKG 247 Query: 539 NTVIVVEHDEDAIRA-ADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRK 597 ++++ HD + +R + +I + G VV +G E I P+S + Sbjct: 248 MAMLLISHDLNLVRRYSHQIIVM------QQGTVVEQGLSEQIFNHPKSAYTLSLI---- 297 Query: 598 IEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPI 657 P L +K + L++ F Sbjct: 298 ------NQNFGPALSLSDDSDTVPIIKAINLSIA-----------------------FAA 328 Query: 658 AQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAG 717 + L G + PA L + + +S G+T + + + Sbjct: 329 KKSLLGGVSEWAPAVNNVSFELARGASLGIVGESGSGKTTIA-----LALSRLLSTQAQV 383 Query: 718 VPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLE 777 E G S ++ ++M F R+ Sbjct: 384 SGEIDVAGIKVNSLS--------KSKLRHFRSTLQMVFQDPFASINP-----RF------ 424 Query: 778 IKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQR 837 + ++++ + + D + L V L + + LSGG+ QR Sbjct: 425 ------NVMQIIEEGL--LVKGVDKAEREKAVIDVLQTVNLPPDFVYRYPHELSGGQRQR 476 Query: 838 VKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQ-GNTIVVIEHNLDVI- 895 V LAR L R + ILDEPT+ L + ++ +L ++ + G + + I H+L V+ Sbjct: 477 VALARALIMR---PKVIILDEPTSALDSSTQVAVVHLLRDIQARFGISYIFISHDLKVVQ 533 Query: 896 KTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFL 936 I+ L G + + + E ++ L Sbjct: 534 ALCQHIMVL------KAGACVEYQPTQQLFENPQHPYSKLL 568 >UniRef50_B1LYK0 ABC transporter related n=21 Tax=Bacteria RepID=B1LYK0_METRJ Length = 545 Score = 242 bits (619), Expect = 3e-62, Method: Composition-based stats. Identities = 92/533 (17%), Positives = 171/533 (32%), Gaps = 94/533 (17%) Query: 412 TRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKIL-KEIGDRLKFL 470 RL E V + + + + G+ + + K R+ L Sbjct: 81 ARL-PERAMRDVRGADITMVFQEPMTSLNPLHTIERQIGEVLGLHRGLTGKAARRRILEL 139 Query: 471 VNVGLN---YLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERL 527 + + + LSGG+ QR+ +A + + V DEP+ L ++ Sbjct: 140 LELVGLRDAERRMGAYPHELSGGQRQRVMIAMALACE--PDLLVADEPTTALDVTVQAQI 197 Query: 528 LGTLIHLRDL-GNTVIVVEHDEDAI-RAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPE 585 L L L+ G ++ + HD + R AD V + G +V G +A+ A P+ Sbjct: 198 LALLADLQKRLGMAMLFITHDLGIVERIADRVCVMLK------GRIVEAGATKAVFADPQ 251 Query: 586 SLTGQYMSGKRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSG 645 + + PK R P L A + + P+ Sbjct: 252 HEYTRRLIASE----PKGRANPVPADAAPLLEAG-----PLKVWFPL------------- 289 Query: 646 KSTLINDTLFPIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYT 705 KS L+ R + R G + + + +S G+T Sbjct: 290 KSGLLR--------RVTGHVRAVDGVSLRVRTG----ETIGVVGESGSGKTT-------- 329 Query: 706 GVFTPVRELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQ 765 P F G A +++ F + Sbjct: 330 ---------LGLALLRLTGSEGPIVFLGQAIDGYGVAQMRPLRKDMQVVFQDPYGSLSPR 380 Query: 766 CKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQ 825 ++ +++ + A + L DVGL + + Sbjct: 381 -----------------MSVADIVAEGLVVQGAARSRAERRAVVAKALTDVGLDPAAMDR 423 Query: 826 SATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKL-RDQGNT 884 SGG+ QR+ +AR + +LDEPT+ L + Q++ +L L R++G Sbjct: 424 YPHEFSGGQRQRIAIARAMV---LNPRFVVLDEPTSALDRSVQAQIVTLLRDLQRERGLA 480 Query: 885 IVVIEHNLDVIKT-ADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFL 936 + I H+L V++ A++++ + G ++ G ET+ + R L Sbjct: 481 YLFISHDLKVVRALANYVIVM------QNGHVVEEGAAETIFANPRTPYTRAL 527 Score = 150 bits (378), Expect = 3e-34, Method: Composition-based stats. Identities = 68/319 (21%), Positives = 100/319 (31%), Gaps = 92/319 (28%) Query: 622 NLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAEPAPYRDIQGLEH 681 + V+ T+ G + G SGSGKS L + Sbjct: 28 AVDGVSFTIRRGETVALVGESGSGKSVTALAILRLL------------------------ 63 Query: 682 FDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESRARGYTPGRFSFNVRGGRCE 741 P R R LFAG +R Sbjct: 64 ---------DPAAR-------------QDGRILFAGRDLARLPE---------------R 86 Query: 742 ACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFD 801 A + + M F + +R I EVL + Sbjct: 87 AMRDVRGADITMVFQEPMTSLNPLHTIER-------------QIGEVLGL-----HRGLT 128 Query: 802 AVPALARKLQTLMDVGL--TYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEP 859 A R L+ L VGL R+G LSGG+ QRV +A L+ L + DEP Sbjct: 129 GKAARRRILELLELVGLRDAERRMGAYPHELSGGQRQRVMIAMALA---CEPDLLVADEP 185 Query: 860 TTGLHFADIQQLLDVLHKLRDQ-GNTIVVIEHNLDVI-KTADWIVDLGPEGGSGGGEILV 917 TT L Q+L +L L+ + G ++ I H+L ++ + AD + + G I+ Sbjct: 186 TTALDVTVQAQILALLADLQKRLGMAMLFITHDLGIVERIADRVCVM------LKGRIVE 239 Query: 918 SGTPETVAECEASHTARFL 936 +G + V R L Sbjct: 240 AGATKAVFADPQHEYTRRL 258 >UniRef50_UPI0001B58B2B peptide ABC transporter, ATP-binding protein n=1 Tax=Streptomyces sp. AA4 RepID=UPI0001B58B2B Length = 581 Score = 241 bits (616), Expect = 8e-62, Method: Composition-based stats. Identities = 113/543 (20%), Positives = 186/543 (34%), Gaps = 55/543 (10%) Query: 417 EARHVYVENTPLPAISDMSIGHAM-EFFNNLKLAG-----QRAKIAEKILKEI----GDR 466 + V V+ L ++ + A + ++A ++ + + + Sbjct: 61 TSGQVVVDGVDLLSLPATELRRARGRKVAYVPQDPATALNPSLRVATQLTEGLGQPARTQ 120 Query: 467 LKFLVNVGLNY---LTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRD 523 ++ +++ L R LSGG+ QR+ +A I AG + VLDEP+ GL Sbjct: 121 VRQVLDTVGLPSDDAFLRRRPRQLSGGQQQRVAIAMAIAAG--PRLIVLDEPTTGLDVAT 178 Query: 524 NERLLGTLIHL-RDLGNTVIVVEHDEDAI-RAADHVIDIGPGAGVHGGEVVAEGPLEAIM 581 R+LG + L R I V HD + AD V+ + +GGEVV G ++ Sbjct: 179 QSRVLGLVRELCRTRDLAAIYVSHDLAVVADVADQVLVM------YGGEVVEHGTTRDVL 232 Query: 582 AVPESLTGQYMSGKRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVG---LFTCI 638 + + + R+ + + R + Sbjct: 233 TRAAHPYTRALLAAVPSATHRHRLVPIRGRAPSIDEPRVGCTFAPRCDYATDACRTTHPV 292 Query: 639 TGVSGSGKSTLINDTLFPIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPR 698 S SG TL R A P + D+ + S + + R Sbjct: 293 LTRSTSG--TLARCLHTEKVARN------ALAVPRAPEPDVPPADQAALLSVSGLNASYR 344 Query: 699 SNPATYTGVFT-PVRELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLP 757 + F A V ES G S + G E G + E +P Sbjct: 345 GRQVVFDVSFDLRPGRCLAVVGES---GSGKTTMSRCLAGLHAEHQ---GSLLFEGKPIP 398 Query: 758 DIYVPCDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREF---FDAVPALARKLQTLM 814 D +R + + Y + H ++ + A A L R L Sbjct: 399 AAAARRDSRT-RRQLQYVFQNPYGSLSPHRTVEDGLLVALRHCFGVTAREGLRRARAALD 457 Query: 815 DVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDV 874 V + G+ LSGG+ QRV +AR L L I DE T+ L + ++++ Sbjct: 458 RVEIPARLAGRYPAELSGGQRQRVAIARALV---CEPKLIICDEVTSALDVSVQASVVEL 514 Query: 875 LHKLRDQGNTIVVIEHNLDVIK-TADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTA 933 L L D G +++ + HNL V++ AD +V L G + SG + V A Sbjct: 515 LRSLMDDGPSMIFVTHNLAVVRSIADEVVVLSE------GRAVESGRTDQVLASPAHPYT 568 Query: 934 RFL 936 R L Sbjct: 569 RSL 571 Score = 122 bits (307), Expect = 6e-26, Method: Composition-based stats. Identities = 40/219 (18%), Positives = 77/219 (35%), Gaps = 23/219 (10%) Query: 389 ESSAVREELAKFISNRPCASCEGTRL-----------RREARHVYVENTPLPAISDMSIG 437 ES + + +++ ++ +G+ L RR++R + S+ Sbjct: 367 ESGSGKTTMSRCLAGLHAEH-QGSLLFEGKPIPAAAARRDSRTRRQLQY-VFQNPYGSLS 424 Query: 438 HAMEFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRL 497 + L L R + + L V + R LSGG+ QR+ + Sbjct: 425 PHRTVEDGL-LVALRHCFGVTAREGLRRARAALDRVEIPARLAGRYPAELSGGQRQRVAI 483 Query: 498 ASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIR-AADH 556 A + + + DE + L ++ L L D G ++I V H+ +R AD Sbjct: 484 ARALVCE--PKLIICDEVTSALDVSVQASVVELLRSLMDDGPSMIFVTHNLAVVRSIADE 541 Query: 557 VIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGK 595 V+ + G V G + ++A P + + Sbjct: 542 VVVLSE------GRAVESGRTDQVLASPAHPYTRSLLAA 574 Score = 51.1 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 20/84 (23%), Positives = 30/84 (35%), Gaps = 6/84 (7%) Query: 615 LTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLF--PIAQRQLNGATIAEPAP 672 + A ++D+ L G + G SGSGKSTL L +G + + Sbjct: 12 VEAAGHPIVRDLGFELGRGEVLGVVGESGSGKSTLALALLGFARAGATITSGQVVVDGVD 71 Query: 673 YRDIQGLEHF----DKVIDIDQSP 692 + E KV + Q P Sbjct: 72 LLSLPATELRRARGRKVAYVPQDP 95 >UniRef50_B1M6V7 ABC transporter related n=45 Tax=Bacteria RepID=B1M6V7_METRJ Length = 585 Score = 241 bits (616), Expect = 8e-62, Method: Composition-based stats. Identities = 87/532 (16%), Positives = 159/532 (29%), Gaps = 91/532 (17%) Query: 417 EARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGD--RLKFLVNVG 474 EA V + I + + + L+ L VG Sbjct: 96 EAELYAVRGRRIAMIFQEPMTALNPLMRIEAQIAEVFAAHGLLTPRTRRSRALELLAEVG 155 Query: 475 LN--YLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLI 532 L + LSGG+ QR+ +A + L + + DEP+ L ++L + Sbjct: 156 LPDPARAAASYPFQLSGGQRQRVMIAMALA--LEPQVLIADEPTTALDVTTQAQILRLIR 213 Query: 533 HLRDL-GNTVIVVEHDEDAI-RAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQ 590 L+ G V+ + HD + AD V + G +V EG I+ P+ Sbjct: 214 DLQARRGMAVMFITHDFGVVAEIADRVAVM------QHGRIVEEGLAADILERPQHPYTA 267 Query: 591 YMSGKRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLI 650 + A P G + G++ KS + Sbjct: 268 KLIAAIPDMEAGAGQTARAA--------------------PRGSVLDVEGLT---KSYTL 304 Query: 651 NDTLFPIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTP 710 LF + + + G+ + +S G++ Sbjct: 305 RGGLFRAPRTVAAVRDVTFTLGRGETLGI--------VGESGSGKSSVGRCLVRLQDPDG 356 Query: 711 VRELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKR 770 R G+ + G +++M F Sbjct: 357 GRVRLGGIDMAGLSGEA----------------LRQARRRIQMVFQDP------------ 388 Query: 771 YNRETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTL 830 Y ++ G+ I + AL L VGL + Sbjct: 389 YGSLNPRVRV-GRAIAD------GPIAYGEPVGTALKAASALLERVGLDASAADRYPHEF 441 Query: 831 SGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQ-GNTIVVIE 889 SGG+ QR+ +AR L+ + + + DE + L + Q+LD+L +L+ + +++ I Sbjct: 442 SGGQRQRIGIARALALK---PEIIVADEAVSALDVSIQAQILDLLDELKRELHLSLLFIT 498 Query: 890 HNLDV-IKTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLKPML 940 H+L V K D ++ + G ++ G + R L + Sbjct: 499 HDLRVAAKICDRVMVM------EKGAVVEIGPGPEIFSNPREPYTRSLVAAI 544 Score = 45.4 bits (106), Expect = 0.011, Method: Composition-based stats. Identities = 23/81 (28%), Positives = 32/81 (39%), Gaps = 6/81 (7%) Query: 619 RGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDT--LFPIAQRQLNGATIAEPAPYRDI 676 R + V+ TL G CI G SGSGKS N L P R + G + + Sbjct: 35 RPYAVDRVSFTLKAGEILCIVGESGSGKSMSANAAMGLLPETVRPVGGRILLGGTDLLTL 94 Query: 677 QGLEHF----DKVIDIDQSPI 693 E + ++ I Q P+ Sbjct: 95 DEAELYAVRGRRIAMIFQEPM 115 >UniRef50_Q7M9Z2 ATP-BINDING COMPONENT OF ABC TRANSPORTER n=1 Tax=Wolinella succinogenes RepID=Q7M9Z2_WOLSU Length = 525 Score = 241 bits (616), Expect = 8e-62, Method: Composition-based stats. Identities = 93/526 (17%), Positives = 178/526 (33%), Gaps = 102/526 (19%) Query: 423 VENTPLPAISDMSIGHAMEFFN-NLKLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTLS 481 V + + + + +LA +E+ + L Sbjct: 84 VRGSEIGFVFQEPLISLNPLHTIEKQLAEAILLHRSLSREELKREIGALYASVGLEALKG 143 Query: 482 R---SAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDL- 537 R LSGG+ QR+ +A + + + DEP+ L +++L L L++ Sbjct: 144 RAKIYPHELSGGQRQRVMIAMALANS--PKLLIADEPTTALDVSVQKQILDLLFRLKEER 201 Query: 538 GNTVIVVEHDEDAIRA-ADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKR 596 G +++++ HD +R AD V + GG+VV E + A P+ Q + Sbjct: 202 GVSLLLISHDLGVVRHYADKVYVM------KGGKVVESASKEELFAHPKHPYTQALLSSL 255 Query: 597 KIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFP 656 + + + G +++ L+ L D L Sbjct: 256 HLPLKESPPS---------RGEILLEAENLDLSF-----------------VLKKDWLGR 289 Query: 657 IAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRS----NPATYTGVFTPVR 712 + ++I+ + G+ + +S G++ + ++ G Sbjct: 290 PKEYLRALSSISLRLREGENLGI--------VGESGSGKSTLALALCKLLSFEGRLRMGH 341 Query: 713 ELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYN 772 E A + ESR R + +++ F + + Sbjct: 342 EEMAKMEESRFRPFRS---------------------MIQIVFQDPYGSLSPRLSIEEIL 380 Query: 773 RETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSG 832 RE LE+ + + R ++ L VGL + LSG Sbjct: 381 REGLEVHFPAQ------------------KESFERRIIEALEGVGLESSYRYRYPNELSG 422 Query: 833 GEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQ-GNTIVVIEHN 891 G+ QRV +AR L R + ILDEPT+ L + Q++ +L +L+ + T + I H+ Sbjct: 423 GQRQRVAIARALILR---PKILILDEPTSALDRSIEHQVVALLLELQKRYNLTYLCISHD 479 Query: 892 LDVI-KTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFL 936 L VI +D + + GG ++ G + + + L Sbjct: 480 LRVIGALSDRVAVM------KGGRLIEEGETSLILQSPTHPYTQEL 519 Score = 131 bits (330), Expect = 1e-28, Method: Composition-based stats. Identities = 49/205 (23%), Positives = 87/205 (42%), Gaps = 22/205 (10%) Query: 748 VIKVEMHFLPD--IYVPCDQCKGKR-----YNRETLEIKYKG-KTIHEVLDMTIEEAREF 799 V + E+ FL + + ++ +G R + + I TI + L I Sbjct: 61 VEEGEILFLGENLLDFSQERLEGVRGSEIGFVFQEPLISLNPLHTIEKQLAEAIL-LHRS 119 Query: 800 FDAVPALARKLQTLMDVGLTYIRLGQ--SATTLSGGEAQRVKLARELSKRGTGQTLYILD 857 VGL ++ LSGG+ QRV +A L+ L I D Sbjct: 120 LSREELKREIGALYASVGLEALKGRAKIYPHELSGGQRQRVMIAMALA---NSPKLLIAD 176 Query: 858 EPTTGLHFADIQQLLDVLHKLRDQ-GNTIVVIEHNLDVIKT-ADWIVDLGPEGGSGGGEI 915 EPTT L + +Q+LD+L +L+++ G ++++I H+L V++ AD + + GG++ Sbjct: 177 EPTTALDVSVQKQILDLLFRLKEERGVSLLLISHDLGVVRHYADKVYVM------KGGKV 230 Query: 916 LVSGTPETVAECEASHTARFLKPML 940 + S + E + + L L Sbjct: 231 VESASKEELFAHPKHPYTQALLSSL 255 Score = 118 bits (297), Expect = 7e-25, Method: Composition-based stats. Identities = 54/308 (17%), Positives = 100/308 (32%), Gaps = 41/308 (13%) Query: 310 WDRRNFYYFQMLKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKENIEFKYMNDRGDTSI 369 + Y Q L S + P + +++L + + G Sbjct: 240 FAHPKHPYTQALLS-------SLHLPLKESPPSRGEILLEAENLDLSFVLKKDWLGRPKE 292 Query: 370 RRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGTRLRREARHVYVENTPLP 429 L ++ R +E E+ + E S A C L E R + + + Sbjct: 293 YLR----ALSSISLRLREGENLGIVGESGSGKSTLALALC--KLLSFEGRL-RMGHEEMA 345 Query: 430 AISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEI-----------------GDRLKFLVN 472 + + + + ++EI ++ L Sbjct: 346 KMEESRFRPFRSMIQIVFQDPYGSLSPRLSIEEILREGLEVHFPAQKESFERRIIEALEG 405 Query: 473 VGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLI 532 VGL R LSGG+ QR+ +A + L + +LDEP+ L + +++ L+ Sbjct: 406 VGLESSYRYRYPNELSGGQRQRVAIARALI--LRPKILILDEPTSALDRSIEHQVVALLL 463 Query: 533 HLRDL-GNTVIVVEHDEDAI-RAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQ 590 L+ T + + HD I +D V + GG ++ EG I+ P Q Sbjct: 464 ELQKRYNLTYLCISHDLRVIGALSDRVAVM------KGGRLIEEGETSLILQSPTHPYTQ 517 Query: 591 YMSGKRKI 598 + G + Sbjct: 518 ELIGSLLL 525 Score = 43.1 bits (100), Expect = 0.058, Method: Composition-based stats. Identities = 29/128 (22%), Positives = 38/128 (29%), Gaps = 8/128 (6%) Query: 620 GNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDT--LFPIAQRQLNGATIAEPAPYRDIQ 677 G L+ V LTL G I G SGSGKS L LFP ++ I Sbjct: 17 GFALESVNLTLKKGECVSIVGESGSGKSFLAQLIVRLFPQGSVEVEEGEILFLGENLLDF 76 Query: 678 GLEHFD-----KVIDIDQSP-IGRTPRSNPATYTGVFTPVRELFAGVPESRARGYTPGRF 731 E + ++ + Q P I P + + R G Sbjct: 77 SQERLEGVRGSEIGFVFQEPLISLNPLHTIEKQLAEAILLHRSLSREELKREIGALYASV 136 Query: 732 SFNVRGGR 739 GR Sbjct: 137 GLEALKGR 144 >UniRef50_Q1GL17 Oligopeptide/dipeptide ABC transporter ATP-binding protein-like protein n=5 Tax=Rhodobacteraceae RepID=Q1GL17_SILST Length = 590 Score = 241 bits (615), Expect = 1e-61, Method: Composition-based stats. Identities = 98/524 (18%), Positives = 170/524 (32%), Gaps = 87/524 (16%) Query: 423 VENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDR--LKFLVNVG--LNYL 478 V + I + + + + +E R L+ VG Sbjct: 89 VRGNRIAMIFQEPMRSLSPLHRIGNQVVEIIHLHRSVSEEAAKREVLECFERVGFPDPER 148 Query: 479 TLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHL-RDL 537 T LSGG QR +A + A + + DEP+ L ++LG + L R+ Sbjct: 149 TWRSYPFELSGGMRQRAMIAMAMVAK--PDLLIADEPTTALDVTTQAQVLGLMKDLQRET 206 Query: 538 GNTVIVVEHDEDAIR-AADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKR 596 G +++V HD + A+ V+ + H G V+ GP E I+ P + + Sbjct: 207 GMAMVLVTHDLGVVANMAEQVVVM------HKGRVMEAGPAEPILRAPAHPYTKDLFEAA 260 Query: 597 KIEVPK--KRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTL 654 P + +L+L T T+ G K TL+ Sbjct: 261 PKIPPAISPAPQEQQDLILELRNVTK------TFTMRSGKSWS--------KPTLVRACD 306 Query: 655 FPIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVREL 714 + + + +S G+T + A Sbjct: 307 SVDLRLPRGKT-------------------LAIVGESGSGKTTAARIALGAETVD----- 342 Query: 715 FAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRE 774 GG G +E+H + Q + + ++ Sbjct: 343 ---------------------AGGEVLFRHAAGAEALEVHDMDRDARRAFQRQAQMVFQD 381 Query: 775 TLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGE 834 + I + L + E AR + L VGL L + SGG+ Sbjct: 382 PYSSLSPRQRIFDTLAEPL-EIHGIGARADHKARAAEMLRLVGLPGDMLSRYPHAFSGGQ 440 Query: 835 AQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRD-QGNTIVVIEHNLD 893 QR+ +AR L L + DEPT+ L + +Q+L +L ++RD + + + I H+L Sbjct: 441 RQRLSIARALM---LDPALLVCDEPTSALDVSVQEQILTLLEEIRDARQLSYLFISHDLA 497 Query: 894 VI-KTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFL 936 V+ + AD + + G I+ G PE + + L Sbjct: 498 VVARIADEVAVMRR------GLIVEQGPPEVLFHNPKHPYTKAL 535 Score = 140 bits (353), Expect = 2e-31, Method: Composition-based stats. Identities = 60/344 (17%), Positives = 102/344 (29%), Gaps = 35/344 (10%) Query: 283 LGVQQYFDPDRVIQNPELSLAGGAIRG-WDRRNFYYFQMLKSLADHYKFDVEAPWGSLSA 341 LGV V+ + + G Y + L A K Sbjct: 217 LGVVANMAEQVVVMHKGRVMEAGPAEPILRAPAHPYTKDLFEAA--PKIPP--AISPAPQ 272 Query: 342 NVHKVVLYGSGKENIEFKYMNDRGDTSIRRHPFEGVLHNMER---RYKETESSAVREELA 398 ++L + V + R ES + + A Sbjct: 273 EQQDLILELRNVTKTFTMRSGKSWSKPTLVRACDSVDLRLPRGKTLAIVGESGSGKTTAA 332 Query: 399 KFISNRPCASCEGTRL-----RREARHVYVENTP-----------LPAISDMSIGHAMEF 442 + G L EA V+ + + S+ Sbjct: 333 RIALGAETVDAGGEVLFRHAAGAEALEVHDMDRDARRAFQRQAQMVFQDPYSSLSPRQRI 392 Query: 443 FNNLKLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIG 502 F+ L + I + + L VGL LSR SGG+ QR+ +A + Sbjct: 393 FDTLAEPLEIHGIGAR-ADHKARAAEMLRLVGLPGDMLSRYPHAFSGGQRQRLSIARALM 451 Query: 503 AGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRD-LGNTVIVVEHDEDAI-RAADHVIDI 560 L + V DEP+ L E++L L +RD + + + HD + R AD V + Sbjct: 452 --LDPALLVCDEPTSALDVSVQEQILTLLEEIRDARQLSYLFISHDLAVVARIADEVAVM 509 Query: 561 GPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEVPKKR 604 G +V +GP E + P+ + + + + + Sbjct: 510 RR------GLIVEQGPPEVLFHNPKHPYTKALIAAQPVPDVDRP 547 Score = 42.7 bits (99), Expect = 0.067, Method: Composition-based stats. Identities = 22/129 (17%), Positives = 38/129 (29%), Gaps = 12/129 (9%) Query: 617 GARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTL--FPIAQRQLNGATIAEPAP-- 672 G +++V + G + G SGSGK+ L P R +G I Sbjct: 15 GRDAPVVQNVNFEVNPGETLALVGESGSGKTISCRAVLRILPRTARLHSGRMILRGDQDE 74 Query: 673 -------YRDIQGLEHFDKVIDIDQSPIGR-TPRSNPATYTGVFTPVRELFAGVPESRAR 724 R ++ +++ I Q P+ +P + + R Sbjct: 75 LDLARISERQMRHDVRGNRIAMIFQEPMRSLSPLHRIGNQVVEIIHLHRSVSEEAAKREV 134 Query: 725 GYTPGRFSF 733 R F Sbjct: 135 LECFERVGF 143 >UniRef50_B9JKV4 Oligopeptide ABC transporter n=23 Tax=Alphaproteobacteria RepID=B9JKV4_AGRRK Length = 635 Score = 239 bits (611), Expect = 3e-61, Method: Composition-based stats. Identities = 101/533 (18%), Positives = 178/533 (33%), Gaps = 79/533 (14%) Query: 423 VENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKIL--KEIGDRLKFLVNVGL---NY 477 + + I + + +I L E ++ + ++++ + Sbjct: 97 MRGARMANIFQEPMTSLSPLHTVGNQVSEALRIHNPALSKAEQREKTEEMLSLVGFQNPH 156 Query: 478 LTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDL 537 T LSGG QR +A + + + DEP+ L ++LG L L+ Sbjct: 157 RTFDMYPFELSGGMRQRAMIAMALICN--PALLIADEPTTALDVTIQAQILGLLRGLQQK 214 Query: 538 -GNTVIVVEHDEDAIR-AADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGK 595 ++++ HD + AD V+ I + GE++ GP+E I P+ + + Sbjct: 215 FNMAMLLITHDLGVVANMADEVVVI------YHGEIMEAGPVETIFRQPQHRYLKALMSA 268 Query: 596 RKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLF 655 + + +L R +PV L T SGK + Sbjct: 269 VP--------HFDMKPGERLKSLR---------DVPVNLSTF------SGKKKIAKANTN 305 Query: 656 ----PIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPV 711 P + + + G + +D R G Sbjct: 306 ATAAPDVLLSVRNLVKTYTSKGGGLFGRREGTRFRAVDDVSFD-IRRGECLGLVGESGCG 364 Query: 712 RELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDG------VIKVEMHFLPDIYVPCDQ 765 + + + RA G SF+ G+ + G K++M F + + Sbjct: 365 KTTVSKILM-RAVSADSGSVSFDDGDGKIDVLAVKGDALMDLRTKIQMVFQDPVSSLSPR 423 Query: 766 CKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQ 825 TI +L + E D+ + + +GL L + Sbjct: 424 -----------------MTIRNILSEPL-EIHRHGDSDERKDKVKGLMQAIGLDQHYLSR 465 Query: 826 SATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKL-RDQGNT 884 + SGG+ QR+ +AR L+ G L ILDEP + L + Q+L++L L R+ G T Sbjct: 466 YPHSFSGGQRQRIGIARALA---LGPKLLILDEPVSALDVSVQAQILNLLKDLQRELGLT 522 Query: 885 IVVIEHNLDVIK-TADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFL 936 + I HNL V+ AD I + G I+ E + R L Sbjct: 523 YLFISHNLAVVDYMADRIAVMAR------GRIVEIAPREIILRDPVHPYTRSL 569 Score = 128 bits (323), Expect = 8e-28, Method: Composition-based stats. Identities = 68/328 (20%), Positives = 101/328 (30%), Gaps = 83/328 (25%) Query: 613 LKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAEPAP 672 + G + +K+ L + G T + G SGSGKS Sbjct: 17 FSIYGDKLRVVKNANLRVLPGKVTALVGESGSGKS------------------------- 51 Query: 673 YRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESRARGYTPGRFS 732 I QS +G P PA +G R LF + G T Sbjct: 52 --------------IISQSIMGILP--APAQASG-----RILFTDPLD----GQTTDILQ 86 Query: 733 FNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKYKGKTIHEVLDMT 792 G +G + + F + E L I + Sbjct: 87 LPRDGIAIRQMRGARMANI---FQEPMTSLSPLHTVGNQVSEALRIHNPALS-------- 135 Query: 793 IEEAREFFDAVPALARKLQTLMDVGL--TYIRLGQSATTLSGGEAQRVKLARELSKRGTG 850 + + L VG + LSGG QR +A L Sbjct: 136 ---------KAEQREKTEEMLSLVGFQNPHRTFDMYPFELSGGMRQRAMIAMALI---CN 183 Query: 851 QTLYILDEPTTGLHFADIQQLLDVLHKLRDQ-GNTIVVIEHNLDVIK-TADWIVDLGPEG 908 L I DEPTT L Q+L +L L+ + +++I H+L V+ AD +V + Sbjct: 184 PALLIADEPTTALDVTIQAQILGLLRGLQQKFNMAMLLITHDLGVVANMADEVVVIYH-- 241 Query: 909 GSGGGEILVSGTPETVAECEASHTARFL 936 GEI+ +G ET+ + L Sbjct: 242 ----GEIMEAGPVETIFRQPQHRYLKAL 265 >UniRef50_C4FE85 Putative uncharacterized protein n=1 Tax=Bifidobacterium angulatum DSM 20098 RepID=C4FE85_9BIFI Length = 578 Score = 239 bits (611), Expect = 3e-61, Method: Composition-based stats. Identities = 101/500 (20%), Positives = 171/500 (34%), Gaps = 92/500 (18%) Query: 453 AKIAEKILKEIGD-RLKFLVNVGLN--YLTLSRSAETLSGGEAQRIRLASQIGAGLVGVM 509 K KE+ + L VG+ + SGG+ QRI +A + L + Sbjct: 136 RAHGMKDKKELRAKAIDILKKVGIPDAETRVDYYPHQFSGGQKQRIVIAMALV--LNPGL 193 Query: 510 YVLDEPSIGLHQRDNERLLGTLIHLRDL-GNTVIVVEHDEDAI-RAADHVIDIGPGAGVH 567 + DEP+ L +L L RD G +V+++ H+ + AD V+ + + Sbjct: 194 ILADEPTTALDVTVQAEILDLLRLARDEFGASVLIITHNMGVVADIADEVVVM------Y 247 Query: 568 GGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEVPKKRVPANPEKVLKLTGARGNNLKDVT 627 G VV +GP+E I P+ Q + VP+ R + D Sbjct: 248 RGHVVEQGPVEQIFYKPQHEYTQRLLAA----VPRIGQHLVVRDRKGNPIERKTDWHDEP 303 Query: 628 LTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAEPAPYRDIQGLEHFDKVID 687 L + IT + P + + + Sbjct: 304 LAVKA-RNLSITYP---------GHLMQPDFKAVDGIDFEIHRSEV-----------LGL 342 Query: 688 IDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDG 747 + +S G++ A + G S NV G Sbjct: 343 VGESGSGKSTTGR---------------AIAGLQKVTGG-----SLNVLG---------- 372 Query: 748 VIKVEMHFLPDIYVPCDQCKGKR----YNRETLEIKYKG-KTIHEVLDMTIEEAREFFDA 802 VEM+ V K KR + + + TI E + + +F Sbjct: 373 ---VEMN-----GVKERDFKAKRADIGFVFQDPGSSFDPLMTIAENVAEPLLVHHKFGSV 424 Query: 803 VPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTG 862 A L V L + + + LSGG+ QR LAR L+ + +L I DEPT+ Sbjct: 425 AEAKNYVGDLLEMVQLPRVYMDRYPHELSGGQRQRASLARGLALK---PSLLIADEPTSA 481 Query: 863 LHFADIQQLLDVLHKLRDQ-GNTIVVIEHNLDVIKT-ADWIVDLGPEGGSGGGEILVSGT 920 L + ++L++ +L+ + G + I H+L V+ AD I+ + G+I+ G Sbjct: 482 LDVSVQAKVLELFKRLQAEIGFACLFITHDLAVVDMLADRIMVMHK------GKIVEHGD 535 Query: 921 PETVAECEASHTARFLKPML 940 + + E + + L L Sbjct: 536 ADDIIERPQNPYTQKLLASL 555 Score = 142 bits (357), Expect = 8e-32, Method: Composition-based stats. Identities = 103/628 (16%), Positives = 196/628 (31%), Gaps = 108/628 (17%) Query: 14 LKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQFLSLMEKPDV 73 ++++N IPR ++ V G SGSGKS A + + E+ + +LS + D Sbjct: 37 VEDVNFTIPRKTVVGVVGESGSGKSVTARSII-----KLLPETATTSGAIYLS--NREDT 89 Query: 74 DHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCPDHDVPLAAQTVS 133 ++ LS +S EQ T + Q + Sbjct: 90 GTLDVLS--LSGEQLRTMRGS-----------------------------QAAMVFQEPN 118 Query: 134 QMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARIDGEVCDLSDPPKLE 193 +++ V + L A +K++K K ++ L G D E P + Sbjct: 119 SVLNPVYTIGWQIEEGLRAHGMKDKKELRAKAIDILKKVG----IPDAETRVDYYPHQFS 174 Query: 194 LQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVADMDDPKAEELLFSANFAC 253 +K I V+ + L LA+ TAL T +D + F Sbjct: 175 GGQKQRI-VIAMALVLNPGLI--LADEPTTAL---DVTVQAEILDLLRLARDEF------ 222 Query: 254 PICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPELSLAGGAIR-GWDR 312 G S+ + + GV + V+ + G + + + Sbjct: 223 ---GASVLIITHNM----------------GVVADIADEVVVMYRGHVVEQGPVEQIFYK 263 Query: 313 RNFYYFQMLKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKENIEFKYMNDRGDTSIRRH 372 Y Q L + + + K + ++ + ++ + + Sbjct: 264 PQHEYTQRLLAAVPRIGQHLVVRDRKGNPIERKTDWH-DEPLAVKARNLSITYPGHLMQP 322 Query: 373 PFE---GVLHNMERRY---KETESSAVREELAKFISNRPCASCEGTRLRREARHVYVENT 426 F+ G+ + R ES + + + I+ G+ L V + Sbjct: 323 DFKAVDGIDFEIHRSEVLGLVGESGSGKSTTGRAIAGLQ-KVTGGS-LN--VLGVEMNGV 378 Query: 427 ----------PLPAISDMS---IGHAMEFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNV 473 + + M N+ + + L V Sbjct: 379 KERDFKAKRADIGFVFQDPGSSFDPLMTIAENVAEPLLVHHKFGSVAEAKNYVGDLLEMV 438 Query: 474 GLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIH 533 L + + R LSGG+ QR LA + L + + DEP+ L ++L Sbjct: 439 QLPRVYMDRYPHELSGGQRQRASLARGLA--LKPSLLIADEPTSALDVSVQAKVLELFKR 496 Query: 534 LRDL-GNTVIVVEHDEDAIR-AADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQY 591 L+ G + + HD + AD ++ + H G++V G + I+ P++ Q Sbjct: 497 LQAEIGFACLFITHDLAVVDMLADRIMVM------HKGKIVEHGDADDIIERPQNPYTQK 550 Query: 592 MSGKRKIEVPKKRVPANPEKVLKLTGAR 619 + + P K+ + L R Sbjct: 551 LLASLPLPDPVKQREHRAKLHDLLAAQR 578 >UniRef50_Q7WJX8 ABC transport protein, ATP-binding component n=3 Tax=Bordetella RepID=Q7WJX8_BORBR Length = 544 Score = 239 bits (610), Expect = 4e-61, Method: Composition-based stats. Identities = 92/526 (17%), Positives = 163/526 (30%), Gaps = 85/526 (16%) Query: 419 RHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQ--RAKIAEKILKEIGDRLKFLVNVGLN 476 R + + + + + + + L+ + V L Sbjct: 78 RAAGLRGDRIAMVFQDPFTALNPSLPVGRQITEALVERGRADARSARAEALRLMDEVRLP 137 Query: 477 YLT--LSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHL 534 + L LSGG QRI +A+ + + +LDEP+ L R+L L L Sbjct: 138 RASTLLDAYPHQLSGGMKQRIVIATALACS--PDLLLLDEPTTALDVTVEARILDLLDEL 195 Query: 535 R-DLGNTVIVVEHDEDAI-RAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYM 592 R G +++ + H+ + R V + HGG V G + ++ P + + Sbjct: 196 RVQRGLSMVFISHNIGLVERMCSRVTVM------HGGRVQEAGAAQQVLWHPAHAYTRKL 249 Query: 593 SGKRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLIND 652 + + GA ++DV LT G + L+ Sbjct: 250 LAALPLLEKRAPAVPA-------VGAPIARVRDVRLTFRPAHPLG-------GWARLLRL 295 Query: 653 TLFPIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVR 712 + P V + +S G++ Sbjct: 296 PRAEGVAALAGVSLELRPREV-----------VGLVGESGSGKSTLGRCLVGLQAPDAGT 344 Query: 713 ELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYN 772 + RA R + +M F + Sbjct: 345 VELSDHDVYRASPEVARRL----------------RRQSQMVFQNPDSSLNPR------- 381 Query: 773 RETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSG 832 + + EVL ++ D R + L V L + LSG Sbjct: 382 ----------QRVGEVLRRPLQ--LMGLDRRQQDRRMDELLDLVRLPAAYAERYPHQLSG 429 Query: 833 GEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQ-GNTIVVIEHN 891 GE QRV +AR L+ ++ + DE T+ L + +L++L LRD+ G ++ I H+ Sbjct: 430 GEKQRVGIARTLA---LEPSVLVCDEATSALDVSVQASILELLKDLRDRLGVAMLFISHD 486 Query: 892 LDVI-KTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFL 936 L V+ + +D +V + G I+ G + V A R L Sbjct: 487 LAVVSQISDRVVVMRH------GAIVEQGRTDQVLSAPAHEYTRLL 526 Score = 128 bits (321), Expect = 1e-27, Method: Composition-based stats. Identities = 45/227 (19%), Positives = 83/227 (36%), Gaps = 35/227 (15%) Query: 389 ESSAVREELAKFISNRPCASCE----------------GTRLRREARHVYVENTPLPAIS 432 ES + + L + + RLRR+++ V+ Sbjct: 322 ESGSGKSTLGRCLVGLQAPDAGTVELSDHDVYRASPEVARRLRRQSQMVFQNPDS-SLNP 380 Query: 433 DMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEA 492 +G + L+L G + ++ + E+ L V L R LSGGE Sbjct: 381 RQRVGEVLR--RPLQLMGLDRRQQDRRMDEL------LDLVRLPAAYAERYPHQLSGGEK 432 Query: 493 QRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDL-GNTVIVVEHDEDAI 551 QR+ +A + L + V DE + L +L L LRD G ++ + HD + Sbjct: 433 QRVGIARTLA--LEPSVLVCDEATSALDVSVQASILELLKDLRDRLGVAMLFISHDLAVV 490 Query: 552 -RAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRK 597 + +D V+ + GA +V +G + +++ P + + Sbjct: 491 SQISDRVVVMRHGA------IVEQGRTDQVLSAPAHEYTRLLLDSVP 531 Score = 125 bits (315), Expect = 7e-27, Method: Composition-based stats. Identities = 54/218 (24%), Positives = 82/218 (37%), Gaps = 31/218 (14%) Query: 727 TPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKYKGKTIH 786 T G +F+ E G ++ M F R E L Sbjct: 63 TAGSVAFDGEDITGERAAGLRGDRIAMVFQDPFTALNPSLPVGRQITEAL---------- 112 Query: 787 EVLDMTIEEAREFFDAVPALARKLQTLMDVGLTY--IRLGQSATTLSGGEAQRVKLAREL 844 +E R DA A A L+ + +V L L LSGG QR+ +A L Sbjct: 113 ------VERGRA--DARSARAEALRLMDEVRLPRASTLLDAYPHQLSGGMKQRIVIATAL 164 Query: 845 SKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLR-DQGNTIVVIEHNLDVI-KTADWIV 902 + L +LDEPTT L ++LD+L +LR +G ++V I HN+ ++ + + Sbjct: 165 A---CSPDLLLLDEPTTALDVTVEARILDLLDELRVQRGLSMVFISHNIGLVERMCSRVT 221 Query: 903 DLGPEGGSGGGEILVSGTPETVAECEASHTARFLKPML 940 + GG + +G + V A R L L Sbjct: 222 VMH------GGRVQEAGAAQQVLWHPAHAYTRKLLAAL 253 Score = 55.8 bits (133), Expect = 7e-06, Method: Composition-based stats. Identities = 24/92 (26%), Positives = 33/92 (35%), Gaps = 3/92 (3%) Query: 614 KLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLF--PIAQRQLNGATIAEPA 671 ++ R L V L LP G I G SGSGKST+ L P G+ + Sbjct: 13 EVRYGRNQVLHGVDLELPRGASLGIVGESGSGKSTIAWTVLGLLPPGAAVTAGSVAFDGE 72 Query: 672 PYRDIQGLEHF-DKVIDIDQSPIGRTPRSNPA 702 + D++ + Q P S P Sbjct: 73 DITGERAAGLRGDRIAMVFQDPFTALNPSLPV 104 Score = 42.3 bits (98), Expect = 0.099, Method: Composition-based stats. Identities = 17/45 (37%), Positives = 27/45 (60%) Query: 1 MDKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTL 45 + +EVR R L ++L +PR + + G SGSGKS++A+ L Sbjct: 9 IKGLEVRYGRNQVLHGVDLELPRGASLGIVGESGSGKSTIAWTVL 53 >UniRef50_B3PHQ3 Peptide ABC transporter, ATP-binding protein n=105 Tax=Bacteria RepID=B3PHQ3_CELJU Length = 537 Score = 239 bits (609), Expect = 5e-61, Method: Composition-based stats. Identities = 88/526 (16%), Positives = 163/526 (30%), Gaps = 89/526 (16%) Query: 423 VENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKI-LKEIGDRLKFLVNVGLNYLTLS 481 + + I + + + + I ++ + ++ Sbjct: 90 IRGNKIAMIFQDPMTCLNPYMRVVDQLVEVLLEHRDITRRDARAKAIAALDEVGIRDAAK 149 Query: 482 R---SAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHL-RDL 537 R SGG QR+ +A + A + + DEP+ L ++L + L R Sbjct: 150 RVDDYPHQFSGGMRQRVMIAMALLAE--PELLIADEPTTALDVTVQAQILALIKDLQRTR 207 Query: 538 GNTVIVVEHDEDAIR-AADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKR 596 VI + HD ADH++ + G +V +G AI P+ + + Sbjct: 208 QLAVIFITHDLGVAAQMADHILVMEK------GRLVEQGETSAIFQAPKEEYTRKLLAAV 261 Query: 597 KIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFP 656 A + L+ N T G+F Sbjct: 262 LTTAKPVPSAARHDAPALLSVKHLNTW----FTQHTGVFF-------------------- 297 Query: 657 IAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFA 716 +R LN + R G + + +S G++ +FA Sbjct: 298 --RRVLNQVRGVDDISIRIQPGEI----LGVVGESGSGKSTLGRSIIRLVEPDSGEVIFA 351 Query: 717 GVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETL 776 G S N +V+M F + Sbjct: 352 GTDL----------LSLN------PEQLKQRRSQVQMIFQDPYASLNPR----------- 384 Query: 777 EIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQ 836 T+ + L + + + + Q + DVGL + + SGG+ Q Sbjct: 385 ------MTVFDTLAEPLL-LHGIANKQTVVEQVNQLMDDVGLDRRFIRKYPHEFSGGQRQ 437 Query: 837 RVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGN-TIVVIEHNLDVI 895 R+ +AR L+ L I DEP + L Q+L +L L + N T++ I H++ V+ Sbjct: 438 RIAIARALA---PKPRLIIADEPVSALDVTIRAQILALLLDLTQKHNLTMLFISHDMSVV 494 Query: 896 K-TADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLKPML 940 + D ++ + G+++ +G ET+ R L + Sbjct: 495 RYLCDRVMVM------QKGKLIEAGDTETLFAHPQQEYTRQLLAAI 534 Score = 45.4 bits (106), Expect = 0.010, Method: Composition-based stats. Identities = 20/89 (22%), Positives = 30/89 (33%), Gaps = 7/89 (7%) Query: 612 VLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLF--PIAQRQLNGATIAE 669 V + ++D++ +L G I G SGSGKS L P Q+ Sbjct: 15 VFNTRDGQTVAVEDLSFSLNPGEVLGIVGESGSGKSVACYSLLGLIPSPPGQVERGRALF 74 Query: 670 PAPYRDIQGLEHFD-----KVIDIDQSPI 693 G + K+ I Q P+ Sbjct: 75 HGEDLLQMGDKQLRGIRGNKIAMIFQDPM 103 >UniRef50_A6X830 ABC transporter related n=2 Tax=Ochrobactrum anthropi ATCC 49188 RepID=A6X830_OCHA4 Length = 565 Score = 239 bits (609), Expect = 5e-61, Method: Composition-based stats. Identities = 87/523 (16%), Positives = 161/523 (30%), Gaps = 64/523 (12%) Query: 422 YVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILK-EIGDR-LKFLVNV--GLNY 477 + + + + + G + E++ E+ R ++ L V Sbjct: 87 KLRGKDISMVFQDPMMTLNPVVRIIDQIGMAIRAHEQVSDAEVRRRAVEALAKVKIVDPE 146 Query: 478 LTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHL-RD 536 + + SGG QR+ +A + + + DEP+ L +L + L + Sbjct: 147 SKVDQYPHEFSGGMRQRVAIAIALLHR--PQLVIADEPTTALDVSVQAEILIMVKALVAE 204 Query: 537 LGNTVIVVEHDEDAIR-AADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGK 595 +G ++I V HD + AD + + G++V GP ++ P+ Q + Sbjct: 205 MGTSLIWVSHDLATVSSIADTIAVMRR------GKIVESGPARQVLHNPQHPYTQGLLDA 258 Query: 596 RKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLF 655 + L A + L+ G K+ I Sbjct: 259 LP---------SRSMPGKPLASAATEAAGPMDLSGLGGTALGAAPDEAFVKAEAIEKIFA 309 Query: 656 PIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELF 715 G + ++ V I G+ Sbjct: 310 RRI-----GFLRGLGIRWGLLREPGPVHAV-------ISANLTIARGEILGLVGESGSGK 357 Query: 716 AGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRET 775 + + Y P + +V G + G V+M F + Sbjct: 358 STLGRILCGIYPPTSGTVSVGGKPVRSATGKLGTHVQMIFQDPFASLDPR---------- 407 Query: 776 LEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEA 835 +TI + + A F A + L V + SGG+ Sbjct: 408 -------RTIFQSVAEG-PIAHGFCTRANARDYVNRWLRAVAFDPALADRYPHQFSGGQR 459 Query: 836 QRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQ-GNTIVVIEHNLDV 894 QR+ +AR L+ + + I DEP L + Q++++L +LR T++ I H+L V Sbjct: 460 QRIAIARALAMQ---PEVIICDEPVASLDVSIQAQVINLLMELRRNLNITLLFISHDLSV 516 Query: 895 IKT-ADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFL 936 + D +V + GEI+ GT V + L Sbjct: 517 VHHLCDRVVVMRH------GEIVEQGTATQVFTTPRHAYTKML 553 Score = 138 bits (348), Expect = 9e-31, Method: Composition-based stats. Identities = 60/338 (17%), Positives = 98/338 (28%), Gaps = 90/338 (26%) Query: 607 ANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGAT 666 + + ++ D++ TL G + G SGSGKS + L+ Sbjct: 8 RSLRTYFETDKGTVKSVDDISFTLKRGEVMGLVGESGSGKSITGFSLIGL-----LDETG 62 Query: 667 IAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESRARGY 726 + G E G + RG Sbjct: 63 RIQEGSSIRFNGRELVG-------------------------------LDGKELRKLRG- 90 Query: 727 TPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKYKGKTIH 786 + M F + + I Sbjct: 91 ----------------------KDISMVFQDPMMTLNPVVR-----------------II 111 Query: 787 EVLDMTIEEAREFFDAVPALARKLQTLMDVGL--TYIRLGQSATTLSGGEAQRVKLAREL 844 + + M I A E R ++ L V + ++ Q SGG QRV +A L Sbjct: 112 DQIGMAIR-AHEQVSDAEVRRRAVEALAKVKIVDPESKVDQYPHEFSGGMRQRVAIAIAL 170 Query: 845 SKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQ-GNTIVVIEHNLDVIK-TADWIV 902 R L I DEPTT L + ++L ++ L + G +++ + H+L + AD I Sbjct: 171 LHR---PQLVIADEPTTALDVSVQAEILIMVKALVAEMGTSLIWVSHDLATVSSIADTIA 227 Query: 903 DLGPEGGSGGGEILVSGTPETVAECEASHTARFLKPML 940 + G+I+ SG V + L L Sbjct: 228 VMRR------GKIVESGPARQVLHNPQHPYTQGLLDAL 259 Score = 127 bits (318), Expect = 3e-27, Method: Composition-based stats. Identities = 38/232 (16%), Positives = 74/232 (31%), Gaps = 36/232 (15%) Query: 389 ESSAVREELAKFISNRPCASCEGTRLRREARHVYVENTP--------------LPAISDM 434 ES + + L + + C + V V P + Sbjct: 352 ESGSGKSTLGRIL-------CG--IYPPTSGTVSVGGKPVRSATGKLGTHVQMIFQDPFA 402 Query: 435 SIGHAMEFFNNLKLAG-QRAKIAEKILKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQ 493 S+ F ++ ++ +R +L V + R SGG+ Q Sbjct: 403 SLDPRRTIFQSVAEGPIAHGFCTRANARDYVNR--WLRAVAFDPALADRYPHQFSGGQRQ 460 Query: 494 RIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRD-LGNTVIVVEHDEDAIR 552 RI +A + + + + DEP L +++ L+ LR L T++ + HD + Sbjct: 461 RIAIARALA--MQPEVIICDEPVASLDVSIQAQVINLLMELRRNLNITLLFISHDLSVVH 518 Query: 553 A-ADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEVPKK 603 D V+ + GE+V +G + P + + + Sbjct: 519 HLCDRVVVM------RHGEIVEQGTATQVFTTPRHAYTKMLLEAVPKLETRP 564 >UniRef50_D2R3L2 ABC transporter related protein n=17 Tax=Bacteria RepID=D2R3L2_9PLAN Length = 624 Score = 238 bits (608), Expect = 6e-61, Method: Composition-based stats. Identities = 100/539 (18%), Positives = 184/539 (34%), Gaps = 46/539 (8%) Query: 417 EARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKI-LKEIGDRLKFLVNVGL 475 E + + I + + K + I + + ++ +R L Sbjct: 82 ETEMQKLRGKEISMIFQEPMTSLNPVYTVGKQVMEAILIHQNVSRQQARERTIELFREVG 141 Query: 476 ---NYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLI 532 + +SGG+ QR+ +A + + + DEP+ L ++L L Sbjct: 142 IPAPETRIDSYPHQMSGGQKQRVMIAMALACN--PKVLIADEPTTALDVTIQAQILDLLR 199 Query: 533 HLRD-LGNTVIVVEHDEDAI-RAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQ 590 LRD G +++ + HD I AD V + GE+V G + I + P+ + Sbjct: 200 KLRDNRGMSILFITHDLGVIAEIADEVAVM------FQGEIVEHGKVLDIFSNPQHPYTR 253 Query: 591 YMSGKRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLI 650 + R K +V ++ A +K + T+ +T G+ L+ Sbjct: 254 GLLACRPRLDTKYKVLPTVADFMETVKADDGGVKIIEKTMTEKRLESLTTE---GRGRLL 310 Query: 651 NDTLFPIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDI-DQSPIGRTPRSNPATYTGVFT 709 + A + P +G +V D+ PI + + Sbjct: 311 HPRSVLKAIGHPWEDSPHAPDTTCVTEGQAPLLRVRDLKVHFPIRKGLFLRTVGHVKAVD 370 Query: 710 PVRELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMH--FLPDIYVPCDQCK 767 GV RG T G + G +I+ + + + Sbjct: 371 -------GVSFDIFRGQTLGLVGESGCGKTTTGRAILRLIEPDAGEVLYDGVNLRQLGTT 423 Query: 768 GKRYNRETLEIKYKGKTIHEVLDMTIEEAR------EFFDAVPALAR--KLQTLMDVGLT 819 R R L+I ++ +TIE + R + L +VG+ Sbjct: 424 AMRQARRKLQIIFQDPYGSMNPRLTIESMLTEPMVIQGLGKSATDRRDMAVALLEEVGMK 483 Query: 820 YIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKL- 878 L + SGG+ QR+ +AR L+ + DE + L + Q+L++L +L Sbjct: 484 AEHLRRYPHEFSGGQRQRICIARSLAVE---PEFIVCDESVSALDVSVQAQVLNLLKRLQ 540 Query: 879 RDQGNTIVVIEHNLDVIK-TADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFL 936 +G T + I H+L V+K AD + + G+I+ G ET+ + L Sbjct: 541 AKRGLTYIFISHDLSVVKFMADMMAVMKE------GKIVEFGPSETIYARPHEQYTKDL 593 Score = 45.0 bits (105), Expect = 0.014, Method: Composition-based stats. Identities = 21/118 (17%), Positives = 36/118 (30%), Gaps = 8/118 (6%) Query: 620 GNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDT--LFPIAQRQLNGATIAEPAPYRDIQ 677 ++ ++L L G I G SGSGKS L + G+ + Sbjct: 22 VPAVRGISLNLREGETLGIVGESGSGKSVTSFSIMRLLAGTGKIAEGSISYLGRDLVALS 81 Query: 678 GLEHF----DKVIDIDQSPIGR-TPRSNPATYTGVFTPVRELFAGVPESRARGYTPGR 730 E ++ I Q P+ P + + + ++R R R Sbjct: 82 ETEMQKLRGKEISMIFQEPMTSLNPVYTVGKQVMEAILIHQNVSRQ-QARERTIELFR 138 >UniRef50_Q11BW9 Oligopeptide/dipeptide ABC transporter, ATPase subunit n=2 Tax=Rhizobiales RepID=Q11BW9_MESSB Length = 680 Score = 238 bits (607), Expect = 8e-61, Method: Composition-based stats. Identities = 102/552 (18%), Positives = 185/552 (33%), Gaps = 61/552 (11%) Query: 414 LRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNV 473 L +AR + + + + Q + R L+++ Sbjct: 80 LSPDARR-KFRAEHIGVVFQNPATALNP---RMNIGAQLREALPLRGDAANRRAAELLDM 135 Query: 474 GLNYLTLSR---SAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGT 530 R LSGG AQR+ +A + + + DEP+ L ++L Sbjct: 136 VGVPRAWDRLVDFPHELSGGLAQRVVIALALARS--PKLLIADEPTTALDVSIQTQILDL 193 Query: 531 LIHLR-DLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTG 589 + R DL V++V HD D + AD A ++ G ++ EGP +A++ P Sbjct: 194 IDAFRRDLQLAVLLVTHDIDVV--ADRA---QRVAVMYAGNIIEEGPTKALLNDPIHPYT 248 Query: 590 QYMSGKRKIEVPK----------KRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCIT 639 + +V ANP + LTLP Sbjct: 249 AGLLASTPNKVSPGTVLNPVEGAPPSLANPPSGCRFAPRCALATAQCELTLPAASI---- 304 Query: 640 GVSGSGKSTLINDTLFPIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRS 699 D + L+ P + L +V + + R+ Sbjct: 305 ----------AADGRMFRCIQPLSKTNRLPDPPIDVVARLPAASRVPLVKSEAVSRSFIL 354 Query: 700 NPATYTGVFTPVRELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIK-VEMHFLPD 758 + T R+ AGV G + G + G A G+ + + Sbjct: 355 SRHLVTRAPLKQRQAVAGVTLEIFEGESLGVVGESGCGKSTLARLIAGIDHPTQGRIIYR 414 Query: 759 IYVPCDQCKGKRYNRETLEIKY--------KGKTIHEVLDMTIEEAREFFDAVPALARKL 810 D G+R R +++ + TI E++ + + R Sbjct: 415 GQPLSDLGSGRRQWRRDVQMIFQDPYSSLDPRMTIGEIIAEPL--SYNGLAKAERRKRAA 472 Query: 811 QTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQ 870 + +VGL+ + Q +SGG+ QRV +AR LS+ L I DE + L + Sbjct: 473 ALMDEVGLSQELIDQRPAQISGGQRQRVGIARALSQ---DPKLIIADESVSALDVSVQAT 529 Query: 871 LLDVLHKL-RDQGNTIVVIEHNLDVIK-TADWIVDLGPEGGSGGGEILVSGTPETVAECE 928 +L++ +L R++G T + I H+L+V++ D + + G+++ + + Sbjct: 530 ILNLFRRLQRERGLTYLFISHDLNVVRYMCDRVAVM------YLGKLVELAPTDALFRNP 583 Query: 929 ASHTARFLKPML 940 A R L + Sbjct: 584 AHPYTRALLASI 595 Score = 125 bits (315), Expect = 7e-27, Method: Composition-based stats. Identities = 114/626 (18%), Positives = 194/626 (30%), Gaps = 96/626 (15%) Query: 14 LKNINLVIPRDKLIVVTGLSGSGKSSLAFDT--------LYAEGQRRY----VESLSAYA 61 + I+ I + + + G SG GK+ A AEG+ + SLS A Sbjct: 25 VNGISFSIGPGECLGIVGESGCGKTMSAMSIAGLLPEGGFIAEGRIALDGVDLASLSPDA 84 Query: 62 RQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCP 121 R+ K +HI + + +T+ NPR +G LR G+ Sbjct: 85 RR------KFRAEHI-----GVVFQNPATALNPRMNIG------AQLREALPLRGDAANR 127 Query: 122 DHDVPLAAQTVSQMVDNVLSQPEG------KRLMLLAPIIKERKGEHTKTLENLASQGYI 175 L V + D ++ P +R+++ + + K Sbjct: 128 RAAELLDMVGVPRAWDRLVDFPHELSGGLAQRVVIALALARSPKLLIADEPTTALD---- 183 Query: 176 RARIDGEVCDLSDPPKLELQ-----KKHTIEVVVDRFKVRDDLTQRLAESFE-TALELSG 229 I ++ DL D + +LQ H I+VV DR QR+A + +E Sbjct: 184 -VSIQTQILDLIDAFRRDLQLAVLLVTHDIDVVADR-------AQRVAVMYAGNIIEEGP 235 Query: 230 GTAVVADMDDPKAEELLFSANFACPICGYSMRELEPRLFSFNNPAGAC---PTCDGLGVQ 286 A++ D P LL S G + +E S NP C P C Sbjct: 236 TKALLNDPIHPYTAGLLASTPNKVSP-GTVLNPVEGAPPSLANPPSGCRFAPRC------ 288 Query: 287 QYFDPDRVIQNPELSLAGGAIRGWDRRNFYYFQMLKSLADHYKFDVEAPWGSLSANVHKV 346 EL+L +I D R F Q L ++ L A Sbjct: 289 -----ALATAQCELTLPAASIAA-DGRMFRCIQPLSKTNRLPDPPIDV-VARLPAASRVP 341 Query: 347 VLYGSGKENIEFKYMNDRGDTSIRRHPFEGVLHNMERRYKETESSAV-------REELAK 399 + E + ++ R + + + E ES V + LA+ Sbjct: 342 L---VKSEAVSRSFILSRHLVTRAPLKQRQAVAGVTLEIFEGESLGVVGESGCGKSTLAR 398 Query: 400 FISNRPCASCE-----GTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAK 454 I+ + G L + I ++ + Sbjct: 399 LIAGIDHPTQGRIIYRGQPLSDLGSGRRQWRRDVQMIFQDPYSSLDPRMTIGEIIAEPLS 458 Query: 455 IAEKILKEIGDRLKFLVNVGLNYLTL-SRSAETLSGGEAQRIRLASQIGAGLVGVMYVLD 513 E R L++ L + +SGG+ QR+ +A + + + D Sbjct: 459 YNGLAKAERRKRAAALMDEVGLSQELIDQRPAQISGGQRQRVGIARAL--SQDPKLIIAD 516 Query: 514 EPSIGLHQRDNERLLGTLIHL-RDLGNTVIVVEHDEDAIR-AADHVIDIGPGAGVHGGEV 571 E L +L L R+ G T + + HD + +R D V + + G++ Sbjct: 517 ESVSALDVSVQATILNLFRRLQRERGLTYLFISHDLNVVRYMCDRVAVM------YLGKL 570 Query: 572 VAEGPLEAIMAVPESLTGQYMSGKRK 597 V P +A+ P + + Sbjct: 571 VELAPTDALFRNPAHPYTRALLASIP 596 Score = 44.6 bits (104), Expect = 0.018, Method: Composition-based stats. Identities = 17/98 (17%), Positives = 30/98 (30%), Gaps = 7/98 (7%) Query: 622 NLKDVTLTLPVGLFTCITGVSGSGKSTLINDT--LFPIAQRQLNGATIAEPAPYRDIQGL 679 + ++ ++ G I G SG GK+ L P G + + Sbjct: 24 AVNGISFSIGPGECLGIVGESGCGKTMSAMSIAGLLPEGGFIAEGRIALDGVDLASLSPD 83 Query: 680 EHF----DKVIDIDQSPIGR-TPRSNPATYTGVFTPVR 712 + + + Q+P PR N P+R Sbjct: 84 ARRKFRAEHIGVVFQNPATALNPRMNIGAQLREALPLR 121 >UniRef50_B6A1Z5 ABC transporter related n=17 Tax=Bacteria RepID=B6A1Z5_RHILW Length = 583 Score = 237 bits (606), Expect = 1e-60, Method: Composition-based stats. Identities = 90/532 (16%), Positives = 169/532 (31%), Gaps = 92/532 (17%) Query: 414 LRREARHVY-VENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKI--LKEIGDRLKFL 470 L R + + + I + + ++ ++ + + + L Sbjct: 92 LNPRGRQIRAIRGRDIAMIFQEPMSSLSPIHTVGNQIVEALRLHTRMSKAEARAEAISLL 151 Query: 471 VNVGLN--YLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLL 528 V + L R A SGG QR +A + + + DEP+ L +L Sbjct: 152 KQVEIPAPEKALDRYAFQYSGGMRQRAMIAMALACK--PQLLIADEPTTALDVTTQAEIL 209 Query: 529 GTLIHLRDL-GNTVIVVEHDEDAIR-AADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPES 586 + L+ G V+ + HD + AD V+ + H G GP+E I P+ Sbjct: 210 DLIARLQKANGMAVLFITHDMGVVAQIADDVLVM------HNGVAKEYGPVEQIFHAPQD 263 Query: 587 LTGQYMSGKRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGK 646 + + G +++ +K L T A L++V++ G + VS S Sbjct: 264 DYTRMLIGSV-LKLEQKAEIRLARPPLDRTKAPILELRNVSMDF--GEVKALDDVSIS-- 318 Query: 647 STLINDTLFPIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTG 706 L P + + + +S G+T Sbjct: 319 -------LLPG-------------------------ETLGIVGESGSGKTTMGRSI---- 342 Query: 707 VFTPVRELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQC 766 +R + E R G+ A + M F + Sbjct: 343 ----MRLIDPTAGEILYRNAGGDIIDLATAKGQTLAAARRELR---MVFQDPFGSLNPR- 394 Query: 767 KGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQS 826 T+ +++ + R + VGL + Sbjct: 395 ----------------MTVSQIIGEPLLVN-GVAKGRALEERVCHLMEQVGLDPRARERY 437 Query: 827 ATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQ-GNTI 885 SGG+ QR+ +AR + + + DE T+ L + Q+LD+L +L+D+ G Sbjct: 438 PHAFSGGQRQRIGIARAI---TLNPRVIVADEATSALDVSVRSQVLDLLMRLQDELGLAY 494 Query: 886 VVIEHNLDVIK-TADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFL 936 + I H++ VI+ D + + G+++ G E V + L Sbjct: 495 IFISHDIGVIRYMCDRVGVM------YKGQLVEIGEAEQVCRTPEHAYTQAL 540 Score = 140 bits (352), Expect = 4e-31, Method: Composition-based stats. Identities = 68/349 (19%), Positives = 103/349 (29%), Gaps = 84/349 (24%) Query: 592 MSGKRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLIN 651 M+ I N L + D++ ++ G C+ G SGSGKS Sbjct: 1 MTDIVPIAGRPLLEVKNLTVEFPLRTGVFRAVSDLSFSIEPGKTLCVVGESGSGKSVTAR 60 Query: 652 DTLFPIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPV 711 L D G +I DQ+ Sbjct: 61 SIL-----------------QIVDAPGRIAAGSIILNDQN-------------------- 83 Query: 712 RELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRY 771 G + S N RG + A +G + M F + Sbjct: 84 -------------GGSTNLTSLNPRGRQIRAIRGR---DIAMIFQEPMSSLSP------- 120 Query: 772 NRETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLT--YIRLGQSATT 829 I G I E L + A A + L V + L + A Sbjct: 121 ------IHTVGNQIVEALRL-----HTRMSKAEARAEAISLLKQVEIPAPEKALDRYAFQ 169 Query: 830 LSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKL-RDQGNTIVVI 888 SGG QR +A L+ L I DEPTT L ++LD++ +L + G ++ I Sbjct: 170 YSGGMRQRAMIAMALA---CKPQLLIADEPTTALDVTTQAEILDLIARLQKANGMAVLFI 226 Query: 889 EHNLDVIK-TADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFL 936 H++ V+ AD ++ + G E + R L Sbjct: 227 THDMGVVAQIADDVLVMHNGVAK------EYGPVEQIFHAPQDDYTRML 269 Score = 137 bits (346), Expect = 2e-30, Method: Composition-based stats. Identities = 113/649 (17%), Positives = 199/649 (30%), Gaps = 140/649 (21%) Query: 16 NINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQFLSLMEKPDVDH 75 +++ I K + V G SGSGKS A L Q + + Sbjct: 34 DLSFSIEPGKTLCVVGESGSGKSVTARSIL-----------------QIVDAPGRIAAGS 76 Query: 76 IEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCPDHDVPLAAQTVSQM 135 I I +Q S N +T ++ R + A G P+++ + Sbjct: 77 I------ILNDQNGGSTN-------LTSLNPRGRQIRAIRGRDIAMIFQEPMSSLSPIHT 123 Query: 136 V--DNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARIDGEVCDLSDPPKLE 193 V V + R+ K E +L Q V + L+ Sbjct: 124 VGNQIVEALRLHTRM---------SKAEARAEAISLLKQ----------VEIPAPEKALD 164 Query: 194 LQKKHTIEVVVDRFKVRDDLTQR----LAESFETALELSGGTAVVADMDDPKAEELLFSA 249 + R + L + +A+ TAL+++ +AE L A Sbjct: 165 RYAFQYSGGMRQRAMIAMALACKPQLLIADEPTTALDVT-----------TQAEILDLIA 213 Query: 250 NFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPELSLAGGAIR- 308 G ++ + + GV D ++ + ++ G + Sbjct: 214 RLQ-KANGMAVLFITHDM----------------GVVAQIADDVLVMHNGVAKEYGPVEQ 256 Query: 309 GWDRRNFYYFQML----KSLADHYKFDVEAPWGSLSA----NVHKVVL-YGSGKENIEFK 359 + Y +ML L + + P + + V + +G K + Sbjct: 257 IFHAPQDDYTRMLIGSVLKLEQKAEIRLARPPLDRTKAPILELRNVSMDFGEVKALDDVS 316 Query: 360 YMNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGTRLRREAR 419 G+T G++ ES + + + + I + G L R A Sbjct: 317 ISLLPGETL-------GIVG---------ESGSGKTTMGRSIMRLIDPT-AGEILYRNAG 359 Query: 420 HVYVENTPLPAISDMSIGHAMEFFNNLKLAGQ---------RAKIAEKIL-------KEI 463 + L ++ A + I E +L + + Sbjct: 360 G---DIIDLATAKGQTLAAARRELRMVFQDPFGSLNPRMTVSQIIGEPLLVNGVAKGRAL 416 Query: 464 GDRL-KFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQR 522 +R+ + VGL+ R SGG+ QRI +A I L + V DE + L Sbjct: 417 EERVCHLMEQVGLDPRARERYPHAFSGGQRQRIGIARAI--TLNPRVIVADEATSALDVS 474 Query: 523 DNERLLGTLIHLRDL-GNTVIVVEHDEDAIR-AADHVIDIGPGAGVHGGEVVAEGPLEAI 580 ++L L+ L+D G I + HD IR D V + + G++V G E + Sbjct: 475 VRSQVLDLLMRLQDELGLAYIFISHDIGVIRYMCDRVGVM------YKGQLVEIGEAEQV 528 Query: 581 MAVPESLTGQYMSGKRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLT 629 PE Q + P+ R + + + NLK L Sbjct: 529 CRTPEHAYTQALISAIPRPDPRDRDHSRRFRYVAPVNLEPGNLKPDHLK 577 >UniRef50_A9WPA0 Oligopeptide transporter, ATPase protein n=5 Tax=cellular organisms RepID=A9WPA0_RENSM Length = 628 Score = 236 bits (602), Expect = 3e-60, Method: Composition-based stats. Identities = 94/527 (17%), Positives = 172/527 (32%), Gaps = 47/527 (8%) Query: 422 YVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGD----RLKFLVNVGLNY 477 + + + I + + + ++ +I + R+ LV + Sbjct: 116 KIRGSDVAVIFQEPMTALNPVYTIGFQIVETLRLHNEISPDEARVGAIRMLELVELPDPE 175 Query: 478 LTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLR-D 536 LSGG+ QR +A + + + DEP+ L +L + +LR Sbjct: 176 KAFKSYPHQLSGGQRQRAMIAQSL--SCDPKLLIADEPTTALDATVQAEILDLMRNLRNK 233 Query: 537 LGNTVIVVEHDEDAI-RAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGK 595 L + ++++ HD + +D + + G +V G E I P+ Q + Sbjct: 234 LDSAIVLITHDMGVVADLSDRIAVMRK------GVIVETGTAEEIFYNPQHEYTQALLAA 287 Query: 596 RKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLF 655 A + L A +++ V L Sbjct: 288 VPHLGQGNDQAAEVDVTAVLADATQSSVSAVDSE------------------ELARREAA 329 Query: 656 PIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELF 715 + A A + + V GR P + ++ Sbjct: 330 KSSALASARAVSEAQAKAEHGEPVLELRDVAIEYPKQ-GRVPAFRAVEGANLTIYPGQVV 388 Query: 716 AGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRET 775 V ES + T GR + + Q G + + G + + Sbjct: 389 GLVGESGSGKTTIGRAAVGLLPVAEGTLQVVGQDITKAKKNGRQLYEARRNIGMVFQDPS 448 Query: 776 LEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEA 835 + I E + + A+E R L V L + LSGG+ Sbjct: 449 SSLN-PRLPIGESIGEPMFLAKE-AKGPELQKRIEDLLDQVELPRSYRNRYPHELSGGQK 506 Query: 836 QRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQ-GNTIVVIEHNLDV 894 QRV +AR LS + L + DEPT+ L + ++LD+L L+ + G + + H+L V Sbjct: 507 QRVGIARALSLK---PKLMVADEPTSALDVSVQARVLDLLQNLQKEMGFACLFVTHDLAV 563 Query: 895 IK-TADWIVDLGPEGGSGGGEILVSGTPETVAECE-ASHTARFLKPM 939 + AD IV + G+I+ GT + + ++T R L + Sbjct: 564 VDYLADRIVVM------QCGKIVEQGTRDEILRSPKEAYTQRLLAAV 604 Score = 141 bits (355), Expect = 2e-31, Method: Composition-based stats. Identities = 42/206 (20%), Positives = 83/206 (40%), Gaps = 12/206 (5%) Query: 415 RREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKIL-KEIGDRLK-FLVN 472 ++ R +Y + + + G+ +A++ E+ R++ L Sbjct: 427 KKNGRQLYEARRNIGMVFQDPSSSLNPRLPIGESIGEPMFLAKEAKGPELQKRIEDLLDQ 486 Query: 473 VGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLI 532 V L +R LSGG+ QR+ +A + L + V DEP+ L R+L L Sbjct: 487 VELPRSYRNRYPHELSGGQKQRVGIARAL--SLKPKLMVADEPTSALDVSVQARVLDLLQ 544 Query: 533 HL-RDLGNTVIVVEHDEDAIR-AADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQ 590 +L +++G + V HD + AD ++ + G++V +G + I+ P+ Q Sbjct: 545 NLQKEMGFACLFVTHDLAVVDYLADRIVVM------QCGKIVEQGTRDEILRSPKEAYTQ 598 Query: 591 YMSGKRKIEVPKKRVPANPEKVLKLT 616 + + P+K+ + L Sbjct: 599 RLLAAVPLPDPQKQRERRELREQLLA 624 >UniRef50_A7IPD1 ABC transporter related n=5 Tax=Proteobacteria RepID=A7IPD1_XANP2 Length = 605 Score = 236 bits (601), Expect = 5e-60, Method: Composition-based stats. Identities = 103/562 (18%), Positives = 177/562 (31%), Gaps = 96/562 (17%) Query: 416 REARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQR-----AKIAEKILKEIGDRLKFL 470 E+ + + I + G A + +++ D LK Sbjct: 98 PESAMRDLRGREMSMIFQNPRAALNPIRTVGRQIGDVLLQHVQADARNVKEKVIDILKQ- 156 Query: 471 VNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGT 530 V + LSGG QRI +A + + + DEP+ GL + ++ Sbjct: 157 VRIARPEERYHAYPFELSGGMCQRIVIALALACR--PQLMIADEPTTGLDVTTQKAVMDL 214 Query: 531 LIHL-RDLGNTVIVVEHDEDAIRA-ADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLT 588 + L R+ G + +++ HD A D V+ + G VV P E I P+ Sbjct: 215 VTELTRERGMSTLLITHDLGLAAAYCDTVMVMEK------GRVVETAPAERIFRDPQHPY 268 Query: 589 GQYMSGKRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKST 648 + + + E G V+ VSG G S Sbjct: 269 TRKLMRATPRPGITLKDLLPEEPDPLPPAGEGRVAAHVSTP---------ATVSGPGASP 319 Query: 649 LINDTLFPIAQRQLNGATIAEPAPYRDIQGL-------------EHFDK----------- 684 L + A L + + P + E + Sbjct: 320 LPHAGHGASAVPLLKVENLLKEYPRQGAPSAFLSGLLGKKAPPEERIFRAVDGISFEVKK 379 Query: 685 ---VIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESRARGYTPGRFSFNVRGGRCE 741 V + +S G++ S T + F G S F+ + GR Sbjct: 380 GESVGLVGESGCGKSTTSTIVMRLIDPTAGKITFDGEDISAVP---AKDFAHHPLRGR-- 434 Query: 742 ACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKYKGKTIHE-VLDMTIEEAREFF 800 ++M F RY E + I + +L M Sbjct: 435 ---------IQMVFQDPTESLNP-----RYTAE--------RAIADPLLRMG-----GMS 467 Query: 801 DAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPT 860 AR + VGL L + LSGG+ R+ +AR ++ L ILDEPT Sbjct: 468 GGAKLRARVAELAEMVGLPQNLLERFPHQLSGGQKARIGIARAIA---LDPDLVILDEPT 524 Query: 861 TGLHFADIQQLLDVLHKLRDQ-GNTIVVIEHNLDVIK-TADWIVDLGPEGGSGGGEILVS 918 L + +L++L +L+ + G + + + H+L V+ D ++ + G I+ Sbjct: 525 AALDVSVQAVVLNLLEELKQRLGMSYLFVSHDLHVVGLLCDRVIVMRQ------GRIVEE 578 Query: 919 GTPETVAECEASHTARFLKPML 940 G+ + V + R L + Sbjct: 579 GSSQQVLDAPKDAYTRELIAAI 600 Score = 129 bits (325), Expect = 4e-28, Method: Composition-based stats. Identities = 42/207 (20%), Positives = 71/207 (34%), Gaps = 30/207 (14%) Query: 416 REARHVYVENTPLPAISDMSIGH--AMEFFNNLKLAGQR---------AKIAEKILK--- 461 A + + + A+ H + IA+ +L+ Sbjct: 406 PTAGKITFDGEDISAVPAKDFAHHPLRGRIQMVFQDPTESLNPRYTAERAIADPLLRMGG 465 Query: 462 -----EIGDRLKFLVN-VGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEP 515 ++ R+ L VGL L R LSGG+ RI +A I L + +LDEP Sbjct: 466 MSGGAKLRARVAELAEMVGLPQNLLERFPHQLSGGQKARIGIARAIA--LDPDLVILDEP 523 Query: 516 SIGLHQRDNERLLGTLIHLRDL-GNTVIVVEHDEDAI-RAADHVIDIGPGAGVHGGEVVA 573 + L +L L L+ G + + V HD + D VI + G +V Sbjct: 524 TAALDVSVQAVVLNLLEELKQRLGMSYLFVSHDLHVVGLLCDRVIVM------RQGRIVE 577 Query: 574 EGPLEAIMAVPESLTGQYMSGKRKIEV 600 EG + ++ P+ + + Sbjct: 578 EGSSQQVLDAPKDAYTRELIAAIPHPP 604 Score = 43.8 bits (102), Expect = 0.032, Method: Composition-based stats. Identities = 27/128 (21%), Positives = 35/128 (27%), Gaps = 8/128 (6%) Query: 586 SLTGQYMSGKRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSG 645 +T Q P V + G + V LTL G I G SGSG Sbjct: 6 DVTAQAAKTSEAPSGPLLEVRDLTVEFATRRGV-VTAVSQVNLTLAKGETLGIVGESGSG 64 Query: 646 KSTLINDT--LFPIAQRQLNGATIAEPAPYRDIQGLEHFD----KVIDIDQSPIGR-TPR 698 KS + A R G+ D ++ I Q+P P Sbjct: 65 KSVTSYTVMRILDRAGRIAEGSITFSGMDVAHAPESAMRDLRGREMSMIFQNPRAALNPI 124 Query: 699 SNPATYTG 706 G Sbjct: 125 RTVGRQIG 132 >UniRef50_C1ZEI5 ABC-type uncharacterized transport system, duplicated ATPase component n=2 Tax=Bacteria RepID=C1ZEI5_PLALI Length = 620 Score = 235 bits (599), Expect = 8e-60, Method: Composition-based stats. Identities = 96/545 (17%), Positives = 179/545 (32%), Gaps = 53/545 (9%) Query: 413 RLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKE-IGDRLKFLV 471 RL + + + I + + + ++ K+ + R+ L Sbjct: 83 RL-PSRQMQELRGHDISMIFQEPGTSLNPVYKVGSQVAEVLLLHKQATKKNVMQRVIELF 141 Query: 472 NVGLNYLTLSR---SAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLL 528 + R +SGG+ QR+ +A + + + DEP+ L ++L Sbjct: 142 HEVGIPNPGERIHSYPHEMSGGQKQRVMIAMALACN--PQLLIADEPTTALDVTIQAQIL 199 Query: 529 GTLIHLRD-LGNTVIVVEHDEDAI-RAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPES 586 G + L+ +V+ + HD I AD V + + G++V +GP+E I P+ Sbjct: 200 GLIRKLQQTRQMSVLFITHDLGVIAEIADDVAVM------YRGKLVEQGPIEKIFTNPQH 253 Query: 587 LTGQYMSGKRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGK 646 + + R +K+ + + + + + + Sbjct: 254 PYTRGLLACRPTLESQKKRLNTVADFMDVVENQATGEYTIVEKHANSERLVLAEKN---- 309 Query: 647 STLINDTLFPIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQS---PIGRTPRSNPAT 703 D LF ++ P + D P+ Sbjct: 310 ---ARDRLFSPRSEVISLGYDVSAIPETRFIPEGTKPLLSVRDLQVYYPVRTGFLRRVTG 366 Query: 704 YTGVFTPVRELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPC 763 + + RG T G + G +I +P Sbjct: 367 HIKAVDGISFNV-------YRGQTLGLVGESGCGKTTTGRALMRLISFTGGEFDFNGIPW 419 Query: 764 DQC--KGKRYNRETLEIKYKGKTIHEVLDMTIEE------AREFFDAVPALAR--KLQTL 813 Q + R++R L+I ++ MT+E A A R Q L Sbjct: 420 SQLSERNLRHHRRKLQIVFQDPYASLNPRMTVEAHLTEAMAVHQLGANKNDRRDMAAQLL 479 Query: 814 MDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLD 873 ++VGL L + SGG+ QR+ +AR L+ I DE + L + Q+L+ Sbjct: 480 VEVGLKEEHLPRYPHEFSGGQRQRICIARALAVE---PEFIICDESVSALDVSVQAQVLN 536 Query: 874 VLHKLRD-QGNTIVVIEHNLDVIK-TADWIVDLGPEGGSGGGEILVSGTPETVAECEASH 931 +L L++ +G T + I H+L V+K +D I + G ++ G E + Sbjct: 537 LLKDLQEKRGLTYIFISHDLSVVKFMSDMIAVMNQ------GRLVEYGPSELIYADPRDE 590 Query: 932 TARFL 936 R L Sbjct: 591 YTRRL 595 >UniRef50_B3Q6A8 ABC transporter related n=7 Tax=Bradyrhizobiaceae RepID=B3Q6A8_RHOPT Length = 613 Score = 234 bits (598), Expect = 9e-60, Method: Composition-based stats. Identities = 100/580 (17%), Positives = 180/580 (31%), Gaps = 105/580 (18%) Query: 410 EGTRLRR--EARHVYVENTPLPAISDMS------IGHAMEFFNNLKLAGQRAKIAEKILK 461 G L+ E + + I I + ++ ++ A++ K Sbjct: 74 GGMDLKAASEHEMRDLRGREISMIFQNPRAALNPIRKVGDQIEDVLRQHVQSTSADRGEK 133 Query: 462 EIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQ 521 I V + LSGG QR+ +A + + + DEP+ GL Sbjct: 134 AIAAL--EAVKIARPRERYHAYPFQLSGGMCQRVVIALALACN--PQLLIADEPTTGLDV 189 Query: 522 RDNERLLGTLIHL-RDLGNTVIVVEHDEDAIRA-ADHVIDIGPGAGVHGGEVVAEGPLEA 579 + ++ ++ L + G + I++ HD A D V+ + G VV Sbjct: 190 TTQKAVMDLIVELTKSRGLSTILITHDLGLAAAYCDRVVVMEK------GRVVETASAAD 243 Query: 580 IMAVPESLTGQYMSG---------KRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTL 630 I A P+ + + + + ++ + ARG + Sbjct: 244 IFANPQHPYTKKLMRATPRLGVGLRELLPEGERGTTPAQGTAQTASRARGKVGSAHSDD- 302 Query: 631 PVGL----FTCITGVSGSGK--------------STLI----------NDTLFPIAQRQL 662 G + G + + S L+ R Sbjct: 303 -PGEEASPGVGVLGPAEAAPHPTPLPARGEREQASPLLSVEKLVKEYPRQGATATLSRLF 361 Query: 663 NGATIAEPAPYRDIQG----LEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGV 718 + EP +R + G + H + V + +S G++ S T R +F G Sbjct: 362 SRGPAPEPEVFRAVDGISFQIGHGESVGLVGESGCGKSTTSMMLMRLLDQTSGRIVFDGE 421 Query: 719 PESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEI 778 + R ++M F + R Sbjct: 422 EIGTILPHRFARLPLRKS--------------IQMVFQDPTDSLNPRFTAAR-------- 459 Query: 779 KYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRV 838 I + I + E R + VGL L + LSGG+ RV Sbjct: 460 -----AIAD----PILQLGEIKGRDAVRVRCEELAEQVGLPLDLLDRFPHQLSGGQKARV 510 Query: 839 KLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQ-GNTIVVIEHNLDVIK- 896 +AR ++ G L ILDEPT L + +L++L L+ G + + + H+L+V++ Sbjct: 511 GIARAIA---LGPKLVILDEPTAALDVSVQAVVLNLLQDLKQSMGMSYLFVSHDLNVVRL 567 Query: 897 TADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFL 936 D ++ + G+I+ G E V R L Sbjct: 568 LCDRVIVMR------AGKIVEQGPSEQVLGSPKHDYTREL 601 Score = 124 bits (312), Expect = 1e-26, Method: Composition-based stats. Identities = 37/182 (20%), Positives = 64/182 (35%), Gaps = 13/182 (7%) Query: 426 TPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKI--LKEIGDRLKFLVNVGLNYLTL-SR 482 + + F + +I + R + L L L R Sbjct: 438 KSIQMVFQDPTDSLNPRFTAARAIADPILQLGEIKGRDAVRVRCEELAEQVGLPLDLLDR 497 Query: 483 SAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDL-GNTV 541 LSGG+ R+ +A I L + +LDEP+ L +L L L+ G + Sbjct: 498 FPHQLSGGQKARVGIARAIA--LGPKLVILDEPTAALDVSVQAVVLNLLQDLKQSMGMSY 555 Query: 542 IVVEHDEDAIRA-ADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEV 600 + V HD + +R D VI + G++V +GP E ++ P+ + + Sbjct: 556 LFVSHDLNVVRLLCDRVIVM------RAGKIVEQGPSEQVLGSPKHDYTRELLTAIPHPP 609 Query: 601 PK 602 Sbjct: 610 LP 611 Score = 43.4 bits (101), Expect = 0.037, Method: Composition-based stats. Identities = 18/83 (21%), Positives = 31/83 (37%), Gaps = 6/83 (7%) Query: 616 TGARGNNLKDVTLTLPVGLFTCITGVSGSGKS--TLINDTLFPIAQRQLNGATIAEPAPY 673 ++ V +++ G I G SGSGKS + + A R G+ + Sbjct: 19 RRGIVKAVQHVDISVGKGETLAIVGESGSGKSVTSYAVMRILDRAGRIAEGSVMFGGMDL 78 Query: 674 RDIQGLEHFD----KVIDIDQSP 692 + E D ++ I Q+P Sbjct: 79 KAASEHEMRDLRGREISMIFQNP 101 >UniRef50_B1KAP1 ABC transporter related n=7 Tax=Bacteria RepID=B1KAP1_BURCC Length = 559 Score = 234 bits (596), Expect = 1e-59, Method: Composition-based stats. Identities = 94/524 (17%), Positives = 175/524 (33%), Gaps = 88/524 (16%) Query: 423 VENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNVGL---NYLT 479 + + + ++ + L + + + +++ R L+ Sbjct: 101 IRGRRIGYVLQDALVSLDPLWRVRDLVAE--ALHDTRRRDVAARSADLLRSVGIDDPERR 158 Query: 480 LSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGN 539 L + LSGG QR+ + + I G + + DEP+ L ++L L RD G+ Sbjct: 159 LPQYPHQLSGGLRQRVLIGTAIAGG--ASLLIADEPTTALDMTVQRQILSLLRARRDAGD 216 Query: 540 TVIVVEHDEDAI-RAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKI 598 T++++ HD + AD V+ + G+VV +GP +++ P + + Sbjct: 217 TILLISHDLAVVAELADRVLVM------RAGQVVEQGPARDVLSAPTHPYTRALLAAIPT 270 Query: 599 EVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIA 658 + A E+V K + P L A Sbjct: 271 AASRGFRLATAERVPLPP-------KRIDAQAP---------------------VLAVDA 302 Query: 659 QRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGV 718 + G A A L + + + +S G++ + Sbjct: 303 LTKRYGGRDAPAAVDGVSFSLARGETLGIVGESGSGKSTVARIVLGL-----------VE 351 Query: 719 PESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEI 778 P++ ++ G EA + ++++ + R E LE+ Sbjct: 352 PDAGTVTLDGQPWN-----GIPEAARRTRRARLQLIAQDPYSSFDPRYSVGRIIGEGLEV 406 Query: 779 KYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRV 838 R LQ L +V L L + LSGG+ QRV Sbjct: 407 -------------------VGLHGDARRRRVLQLLDEVQLGAACLDRYPRELSGGQRQRV 447 Query: 839 KLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKL-RDQGNTIVVIEHNLDVIKT 897 +AR + + L + DEP + L + Q+LD+L L + G ++ I H+L V+ Sbjct: 448 AIARAFA---SNPALLVADEPVSALDVSIQAQVLDLLADLQAEHGTAMLFISHDLGVVHH 504 Query: 898 -ADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLKPML 940 AD I+ + G ++ SG V + + L L Sbjct: 505 VADRILVMRR------GRVVESGPVTQVFDAPSHPYTASLLDAL 542 Score = 129 bits (325), Expect = 5e-28, Method: Composition-based stats. Identities = 54/341 (15%), Positives = 99/341 (29%), Gaps = 48/341 (14%) Query: 283 LGVQQYFDPDRVIQNPELSLAGG-AIRGWDRRNFYYFQMLKSL---ADHYKFDVEAPWG- 337 L V ++ + G A Y + L + A F + Sbjct: 225 LAVVAELADRVLVMRAGQVVEQGPARDVLSAPTHPYTRALLAAIPTAASRGFRLATAERV 284 Query: 338 SLSANVHKVVLYGSGKENIEFKYMNDRGDTSIRRHPFEGVLHNMERRYK---ETESSAVR 394 L + + R +GV ++ R ES + + Sbjct: 285 PLPPKRIDA-----QAPVLAVDALTKRYGGRDAPAAVDGVSFSLARGETLGIVGESGSGK 339 Query: 395 EELAKFISNRPCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAG---- 450 +A+ + + +A V ++ P I + + + Sbjct: 340 STVARIVLGL---------VEPDAGTVTLDGQPWNGIPEAARRTRRARLQLIAQDPYSSF 390 Query: 451 -QRAKIAEKILKEI-----------GDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLA 498 R + I + + L+ L V L L R LSGG+ QR+ +A Sbjct: 391 DPRYSVGRIIGEGLEVVGLHGDARRRRVLQLLDEVQLGAACLDRYPRELSGGQRQRVAIA 450 Query: 499 SQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDL-GNTVIVVEHDEDAIRA-ADH 556 + + V DEP L ++L L L+ G ++ + HD + AD Sbjct: 451 RAFASN--PALLVADEPVSALDVSIQAQVLDLLADLQAEHGTAMLFISHDLGVVHHVADR 508 Query: 557 VIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRK 597 ++ + G VV GP+ + P + Sbjct: 509 ILVMRR------GRVVESGPVTQVFDAPSHPYTASLLDALP 543 >UniRef50_D1BEN4 ATPase component of various ABC-type transport systems with duplicated ATPase domain n=2 Tax=Actinomycetales RepID=D1BEN4_SANKS Length = 661 Score = 234 bits (596), Expect = 2e-59, Method: Composition-based stats. Identities = 108/554 (19%), Positives = 180/554 (32%), Gaps = 82/554 (14%) Query: 416 REARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNVG- 474 R A + + T + A D + L L Q ++ ++ IGD++ ++ V Sbjct: 114 RTAGRIVLGGTDISAWGDKELEQVRG--ARLGLVPQDPTVSLNPVRRIGDQVADVLVVHS 171 Query: 475 ---------------------LNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLD 513 + LSGG QR+ + + + + D Sbjct: 172 GLARRATGERVVEILEQAGLRDPEAVARQYPHQLSGGMRQRVLIGIALACR--PELVIAD 229 Query: 514 EPSIGLHQRDNERLLGTLIHL-RDLGNTVIVVEHDEDAI-RAADHVIDIGPGAGVHGGEV 571 EP+ L +L L L +LG V++V HD A V+ + G V Sbjct: 230 EPTSALDVTVQRAVLDHLGSLTAELGTAVLLVTHDLGVAAERAQRVVVMNK------GRV 283 Query: 572 VAEGPLEAIMAVPESLTGQYMSGKRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLP 631 V EG I+ P+ + + P + R L + P Sbjct: 284 VEEGSARQILEDPQDPYTKALVAAAPSLSPSR--------------LRPRALVGSAASAP 329 Query: 632 VGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAEPAPYRDIQGLEHFDKVI--DID 689 T + G A +GA+ + +E D V + Sbjct: 330 AAASTPLAGPV--------------SAASPTDGASGPGASAVSLEPVVEVRDLVKEFSVP 375 Query: 690 QSPIGRTPRSNPATYTGVFTPVRELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVI 749 Q G+ P E FA V ES + T R + G + Sbjct: 376 QHGGGKKTLRAVDG-VSFSVPRGETFAIVGESGSGKSTTARLVLRLADPT----SGSVHV 430 Query: 750 KVEMHFLPDIYVPCDQCKGKRYNRETLEIKYKGK-TIHEVLDMTIEEAREFFDAVPALAR 808 + + + + + TI +VL + EA D R Sbjct: 431 DGQDITRVRGRRLRRLREHLQLVYQNPYASLDPRFTIAQVLTEPL-EAFRVGDRASRARR 489 Query: 809 KLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADI 868 + L V L L + LSGG+ QRV +AR L+ + +LDEP + L + Sbjct: 490 AAELLDQVALPTSALHRHPAELSGGQRQRVAIARALALH---PQVVVLDEPVSALDVSVQ 546 Query: 869 QQLLDVLHKL-RDQGNTIVVIEHNLDVIK-TADWIVDLGPEGGSGGGEILVSGTPETVAE 926 Q+L +L L D G + + I H+L V++ +D + + G ++ SGT E + Sbjct: 547 AQILQLLVDLQHDLGLSYLFISHDLAVVRQISDRVGVMSR------GRLVESGTTEQIFA 600 Query: 927 CEASHTARFLKPML 940 + L + Sbjct: 601 DPQHEYTQALLEAI 614 Score = 126 bits (316), Expect = 5e-27, Method: Composition-based stats. Identities = 47/235 (20%), Positives = 75/235 (31%), Gaps = 28/235 (11%) Query: 413 RLR-REARHVYVENTPL---------------PAISDMSIGHAMEFF--NNLKLAGQRAK 454 RL + V+V+ + + F + A Sbjct: 419 RLADPTSGSVHVDGQDITRVRGRRLRRLREHLQLVYQNPYASLDPRFTIAQVLTEPLEAF 478 Query: 455 IAEKILKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDE 514 + L V L L R LSGG+ QR+ +A + L + VLDE Sbjct: 479 RVGDRASRARRAAELLDQVALPTSALHRHPAELSGGQRQRVAIARALA--LHPQVVVLDE 536 Query: 515 PSIGLHQRDNERLLGTLIHL-RDLGNTVIVVEHDEDAIR-AADHVIDIGPGAGVHGGEVV 572 P L ++L L+ L DLG + + + HD +R +D V + G +V Sbjct: 537 PVSALDVSVQAQILQLLVDLQHDLGLSYLFISHDLAVVRQISDRVGVMSR------GRLV 590 Query: 573 AEGPLEAIMAVPESLTGQYMSGKRKIEVPKKRVPANPEKVLKLTGARGNNLKDVT 627 G E I A P+ Q + V + +GA ++ Sbjct: 591 ESGTTEQIFADPQHEYTQALLEAIPGRVEAVAGRDGVSPLATGSGATARLCREPD 645 Score = 51.1 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 27/163 (16%), Positives = 46/163 (28%), Gaps = 10/163 (6%) Query: 563 GAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEVPKKRVPANPEKVLKLTGARGNN 622 G+ V G G + + + T + + V E + Sbjct: 17 GSPVTDGR---SGATRSPVTTRSAATQTGKTRDQPARSGPLLVVEGLEVAYRTRRGTVPA 73 Query: 623 LKDVTLTLPVGLFTCITGVSGSGKSTLINDT--LFPIAQRQLNGATIAEPAPYRDI--QG 678 ++ V L + G + G SGSGK+T L P + G + + Sbjct: 74 VRGVDLHVDAGEVVAVVGESGSGKTTTAQAIIGLLPRGGVRTAGRIVLGGTDISAWGDKE 133 Query: 679 LEHFD--KVIDIDQSP-IGRTPRSNPATYTGVFTPVRELFAGV 718 LE ++ + Q P + P V A Sbjct: 134 LEQVRGARLGLVPQDPTVSLNPVRRIGDQVADVLVVHSGLARR 176 >UniRef50_Q4KBW6 Peptide ABC transporter, ATP-binding protein n=4 Tax=Bacteria RepID=Q4KBW6_PSEF5 Length = 596 Score = 234 bits (596), Expect = 2e-59, Method: Composition-based stats. Identities = 108/536 (20%), Positives = 173/536 (32%), Gaps = 60/536 (11%) Query: 422 YVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIA--EKILKEIGDRLK-FLVNVGLNYL 478 + ++ L + + R++ L +VGL Sbjct: 92 RARGGLIGYVAQDPATALNPALRIADLLEETLAVHPSHLDRHGRQQRIRDTLKDVGLPAD 151 Query: 479 --TLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHL-R 535 L R LSGG+ QR+ LA + L + VLDEP+ L +LGTL HL + Sbjct: 152 REFLRRFPHQLSGGQQQRVMLA--LAFVLRPRLIVLDEPTTALDVTTQAHILGTLRHLCK 209 Query: 536 DLGNTVIVVEHDEDAIR-AADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSG 594 LG I V HD I+ D V+ + + G +V +A+ P + + Sbjct: 210 SLGVAAIYVSHDLAVIKDLVDRVLVM------YAGRIVESASRDALFRQPAHPYTRGLLA 263 Query: 595 KRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTL 654 +V ++R G R P G + T L Sbjct: 264 AIP-DVGQRRPLLAIPGQAPAPGQR-----------PAGCAFAPRCPRRGAQCTAGEPLL 311 Query: 655 FPIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGV------- 707 +A + + + R G+ Sbjct: 312 QGLAADVQVACIDPYRQALPMPAPVVAVQAAV-------SGSERRPLLEVQGLNLAYDRQ 364 Query: 708 --FTPVRELFAGVPESRARGYTPGRFSF-NVRGGRCEACQGDGVIKVEMHFLPDIYVPCD 764 F ++ AG + G+ S G E +G + L Sbjct: 365 VLFDVSLQVVAGECLALVGESGSGKTSLARALAGLGEHAEGRVRYAGQPLSLSARQRSKG 424 Query: 765 QCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFF---DAVPALARKLQTLMDVGLTYI 821 +Y + Y+ L T+ E F A AR L V L+ Sbjct: 425 LRHQIQYIFQNP---YRALNPRHTLYQTLSAPLEHFFGIRGAEARARVHAVLQRVSLSPA 481 Query: 822 RLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQ 881 +LSGGE QRV +AR L L I DE T+ L + +L +L +L+D+ Sbjct: 482 LADHYPHSLSGGERQRVAIARALV---CEPKLLICDEVTSALDVSVQASILALLRQLQDE 538 Query: 882 GNTIVVIEHNLDVIK-TADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFL 936 G T++ + H+L V++ AD ++ L G ++ G + V + R L Sbjct: 539 GLTLLFVTHDLGVVRAIADRVLVLKQ------GRVVEQGAVDAVLDRPEHIYTRTL 588 Score = 126 bits (317), Expect = 4e-27, Method: Composition-based stats. Identities = 54/213 (25%), Positives = 79/213 (37%), Gaps = 17/213 (7%) Query: 736 RGGRCEACQGDGVIKVEMHFLPDIYV--PCDQCKGK-RYNRETLEIKYKG-KTIHEVLDM 791 R A +G ++V L D+ G Y + I ++L+ Sbjct: 62 AHARRGARIVEGRVEVAGQSLLDLSAQDLRRARGGLIGYVAQDPATALNPALRIADLLEE 121 Query: 792 TIEEAREFFDAVPALARKLQTLMDVGLTYIRL--GQSATTLSGGEAQRVKLARELSKRGT 849 T+ D R TL DVGL R + LSGG+ QRV LA R Sbjct: 122 TLAVHPSHLDRHGRQQRIRDTLKDVGLPADREFLRRFPHQLSGGQQQRVMLALAFVLR-- 179 Query: 850 GQTLYILDEPTTGLHFADIQQLLDVLHKL-RDQGNTIVVIEHNLDVIK-TADWIVDLGPE 907 L +LDEPTT L +L L L + G + + H+L VIK D ++ + Sbjct: 180 -PRLIVLDEPTTALDVTTQAHILGTLRHLCKSLGVAAIYVSHDLAVIKDLVDRVLVM--- 235 Query: 908 GGSGGGEILVSGTPETVAECEASHTARFLKPML 940 G I+ S + + + A R L + Sbjct: 236 ---YAGRIVESASRDALFRQPAHPYTRGLLAAI 265 >UniRef50_Q11HA0 ABC transporter related n=2 Tax=Alphaproteobacteria RepID=Q11HA0_MESSB Length = 606 Score = 234 bits (596), Expect = 2e-59, Method: Composition-based stats. Identities = 88/529 (16%), Positives = 167/529 (31%), Gaps = 73/529 (13%) Query: 417 EARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKI-LKEIGDRLKFLVNVGL 475 E R + + + + + + + + +K+ +E+ +R L+ Sbjct: 92 EKRRRALRGSRIGLVPQDPMTSLNPVYTIGAQIREGIRAHQKLSEREMAERTLELLETMG 151 Query: 476 NYLTLSR---SAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLI 532 R LSGG QR+ +A + + + DE + L ++L L Sbjct: 152 IPHARERMNSYPHELSGGMRQRVVIAMAMANN--PDLIIADEATTALDVTVQAQVLDALK 209 Query: 533 HLRDL-GNTVIVVEHDEDAIR-AADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQ 590 + L G ++++ HD + AD V + GEVV +G ++ I P S + Sbjct: 210 KAQALTGAALLLITHDLGVVAGRADRVAVMQR------GEVVEQGTVDEIFYQPASSYTR 263 Query: 591 YMSGKRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLI 650 + + ++ + + F G G+ Sbjct: 264 KLL-------------HSIPRLNHTPDLSAPSDVAPDAEVIHSAFERKVGAEGA------ 304 Query: 651 NDTLFPIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPA-TYTGVFT 709 PI + G + + V +D T + +G T Sbjct: 305 -----PILSMRNVGKHFPVYSRGVIRGRVGVIKAVAGVDLDVEAGTTLGIVGESGSGKTT 359 Query: 710 PVRELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGK 769 +R LF P + F + V+M F Sbjct: 360 LIRSLFNLEPI----THGTILFDGQDVHRMPPRDRRRMRKCVQMVFQDPYASLDPM---- 411 Query: 770 RYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATT 829 T+ ++L D A R ++ L V L + Sbjct: 412 -------------MTVRDILMEPA--VINRMDRKLAERRVMELLERVHLKPEHAARYPNE 456 Query: 830 LSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKL-RDQGNTIVVI 888 SGG+ QR+ +AR L L +LDEP + L + ++L +L +L +D + + + Sbjct: 457 FSGGQRQRIAIARALM---LYPRLLVLDEPVSSLDVSIQAEVLTLLKELQKDLNLSYLFV 513 Query: 889 EHNLDVI-KTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFL 936 H+L V+ + A ++ + G I+ G + + R L Sbjct: 514 SHDLSVVAEIAHSVIVMYR------GRIVERGRVDELFRNPKHPYTRAL 556 Score = 42.3 bits (98), Expect = 0.088, Method: Composition-based stats. Identities = 13/85 (15%), Positives = 30/85 (35%), Gaps = 5/85 (5%) Query: 614 KLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQR-QLNGATIAEPAP 672 + ++DV+ ++ G + G SGSGKS + + + ++ G+ Sbjct: 27 RHREEPIEAVRDVSWSIGSGEVLALVGESGSGKSVSALAVMGLLPRNARVAGSIRWRGEE 86 Query: 673 YRDIQGLEHF----DKVIDIDQSPI 693 ++ + Q P+ Sbjct: 87 LLGASEKRRRALRGSRIGLVPQDPM 111 >UniRef50_Q16B84 ABC transporter ATP-binding protein, putative n=10 Tax=Rhodobacterales RepID=Q16B84_ROSDO Length = 591 Score = 233 bits (594), Expect = 3e-59, Method: Composition-based stats. Identities = 90/527 (17%), Positives = 163/527 (30%), Gaps = 93/527 (17%) Query: 423 VENTPLPAISDMSIGHAMEFFNNLKLAGQ--------RAKIAEKILKEIGDRLKFLVNVG 474 + + I + + A+K + E +R+ F Sbjct: 90 IRGDQISMIFQEPMRSLSPLHRLGDQVAEVLTLHRNLSRAEAKKSVLETFERVGFPD--- 146 Query: 475 LNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHL 534 +SGG QR +A + A + + DEP+ L ++LG + L Sbjct: 147 -PARVWKSYPFEMSGGMRQRAMIAMAMVAK--PELLIADEPTTALDVTTQAQVLGLINDL 203 Query: 535 -RDLGNTVIVVEHDEDAIR-AADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYM 592 RD G VI+V HD + A+ V+ + G ++ GP A++ P + + Sbjct: 204 QRDTGMAVILVTHDLGVVANMAESVVVMNK------GRIMESGPAAAVLGAPAHGYTKKL 257 Query: 593 SGKRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLIND 652 + + R C K+ + Sbjct: 258 FAAAPSIPQVAHPVERTKSADHILELRS---------------VC--------KTYTMRA 294 Query: 653 TLFPIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPV- 711 + Q A ++ LE + + +S G+T + A Sbjct: 295 GGWRAPQSIT--------ACHQVNLTLERGKTLAVVGESGSGKTTCARIALGAEAPDEGG 346 Query: 712 RELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRY 771 LF + A + + +M F + + + Sbjct: 347 HVLFRAEANAEPLKI----------HAMTPAERVRFQKQAQMVFQDPYSSLSPRMRISQT 396 Query: 772 NRETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLS 831 E +EI G + + L VGL L + S Sbjct: 397 MTEPMEIHRIG------------------TKAERRDKAAEMLRWVGLDPSMLVRFPHAFS 438 Query: 832 GGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQ-GNTIVVIEH 890 GG+ QR+ +AR L L + DEPT+ L + +Q+L +L +RD+ G + + I H Sbjct: 439 GGQRQRLSIARAL---TLDPVLLVCDEPTSALDVSVQEQILTLLEDIRDRMGLSYLFISH 495 Query: 891 NLDVI-KTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFL 936 +L V+ + AD + + G ++ P+ + R L Sbjct: 496 DLAVVARIADEVAVMRQ------GVVVEQAAPDMLFYNPRHPYTRAL 536 Score = 127 bits (318), Expect = 3e-27, Method: Composition-based stats. Identities = 62/347 (17%), Positives = 106/347 (30%), Gaps = 41/347 (11%) Query: 283 LGVQQYFDPDRVIQNPELSLAGG-AIRGWDRRNFYYFQMLKSLADHYKFD-VEAPWGSLS 340 LGV V+ N + G A Y + L A V P + Sbjct: 218 LGVVANMAESVVVMNKGRIMESGPAAAVLGAPAHGYTKKL--FAAAPSIPQVAHPV-ERT 274 Query: 341 ANVHKVVLYGSGKENIEFKYMNDRGDTSIRR-----HPFEGVLHNMERRYKETESSAVRE 395 + ++ ++ Y G + H L + ES + + Sbjct: 275 KSADHIL----ELRSVCKTYTMRAGGWRAPQSITACHQVNLTLERGKTLAVVGESGSGKT 330 Query: 396 ELAKFISNRPCASCEGTRL-----RREARHV-------YVENTPLPAIS----DMSIGHA 439 A+ G L E + V + S+ Sbjct: 331 TCARIALGAEAPDEGGHVLFRAEANAEPLKIHAMTPAERVRFQKQAQMVFQDPYSSLSPR 390 Query: 440 MEFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLAS 499 M + + +I K + + L VGL+ L R SGG+ QR+ +A Sbjct: 391 MRISQTMTEPMEIHRIGTKAER-RDKAAEMLRWVGLDPSMLVRFPHAFSGGQRQRLSIAR 449 Query: 500 QIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDL-GNTVIVVEHDEDAI-RAADHV 557 + L V+ V DEP+ L E++L L +RD G + + + HD + R AD V Sbjct: 450 AL--TLDPVLLVCDEPTSALDVSVQEQILTLLEDIRDRMGLSYLFISHDLAVVARIADEV 507 Query: 558 IDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEVPKKR 604 + G VV + + + P + + + + Sbjct: 508 AVM------RQGVVVEQAAPDMLFYNPRHPYTRALIAAQPTPDVNRP 548 Score = 42.7 bits (99), Expect = 0.071, Method: Composition-based stats. Identities = 24/129 (18%), Positives = 42/129 (32%), Gaps = 12/129 (9%) Query: 617 GARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTL--FPIAQRQLNGAT---IAEPA 671 G ++DV+ ++ G + G SGSGK+ L P A + +G A Sbjct: 16 GTADPVVRDVSFSVMPGETLALVGESGSGKTISCRSVLRILPEAAQIRSGTINFASASGP 75 Query: 672 PYRDIQGLEHF------DKVIDIDQSPIGR-TPRSNPATYTGVFTPVRELFAGVPESRAR 724 + E D++ I Q P+ +P + + ++ Sbjct: 76 TVDLLAIKERAMRAIRGDQISMIFQEPMRSLSPLHRLGDQVAEVLTLHRNLSRAEAKKSV 135 Query: 725 GYTPGRFSF 733 T R F Sbjct: 136 LETFERVGF 144 >UniRef50_B0RFT6 Putative nucleotide-binding ABC transporter subunit n=2 Tax=Clavibacter michiganensis RepID=B0RFT6_CLAMS Length = 563 Score = 232 bits (593), Expect = 3e-59, Method: Composition-based stats. Identities = 90/531 (16%), Positives = 172/531 (32%), Gaps = 96/531 (18%) Query: 416 REARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIG--DRLKFL--V 471 +A + I + + + ++ I+ L+ L V Sbjct: 89 DQATLRKARGNDIAVIFQEPMTALNPVYTVGFQIVEALRVHNSIIPSAAKVRALELLKLV 148 Query: 472 NVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTL 531 + LSGG+ QR +A + M + DEP+ L+ +L L Sbjct: 149 EMPDPEKAFDSYPHQLSGGQRQRAMIAQSL--SCDPDMLIADEPTTALNVTIQAEILDLL 206 Query: 532 IHLRDLGN-TVIVVEHDEDAI-RAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTG 589 L N ++++ HD + A +VI + G +V G + I P+ Sbjct: 207 RRLHQRLNSAIVIITHDMGVVADLATNVIVM------KSGRIVERGSVREIFQAPKDPYT 260 Query: 590 QYMSGKRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPV-GLFTCITGVSGSGKST 648 + + + A+ ++ + T +LK+V + P G V+G+ Sbjct: 261 KQLLASVPHLGTGE---ASQVEIAERTTEPAISLKEVDIDYPKLGRVPAFRAVTGA---- 313 Query: 649 LINDTLFPIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVF 708 + P V + +S G+T + A G+ Sbjct: 314 ----------------SFDIHPGEV-----------VGVVGESGSGKTTIARAA--VGLL 344 Query: 709 TPVRELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKG 768 R G + ++ + F Sbjct: 345 PVAGGELTVAG-RRMTGISAKDL-------------RAVRREIGIVFQDPGSSLNP---- 386 Query: 769 KRYNRETLEIKYK-GKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSA 827 ++ G++I E L+++ F R + L V L + Sbjct: 387 ----------RWPIGQSIGEPLELS-----GQFSKKQQSDRVEELLEQVELPRSFRNRYP 431 Query: 828 TTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQ-GNTIV 886 LSGG+ QRV +AR L+ R + + DEPT+ L + ++L +L +++ + + Sbjct: 432 NELSGGQRQRVGIARALALR---PKVLVADEPTSALDVSVQARVLALLQEIQKELQFACL 488 Query: 887 VIEHNLDVIK-TADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFL 936 + H+L V+ AD IV + G+I+ G E++ + L Sbjct: 489 FVSHDLAVVDLLADRIVVMNH------GKIVEQGPTESILRNPQHPYTQKL 533 Score = 131 bits (330), Expect = 1e-28, Method: Composition-based stats. Identities = 40/194 (20%), Positives = 75/194 (38%), Gaps = 15/194 (7%) Query: 419 RHVYVENTPLPAISDMSIGHAM-EFFNNLKLAGQRAKIAEKILKEIGDRLKFLVN-VGLN 476 R V + + + + + K+ DR++ L+ V L Sbjct: 367 RAVR---REIGIVFQDPGSSLNPRWPIGQSIGEPLELSGQFSKKQQSDRVEELLEQVELP 423 Query: 477 YLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHL-R 535 +R LSGG+ QR+ +A + L + V DEP+ L R+L L + + Sbjct: 424 RSFRNRYPNELSGGQRQRVGIARALA--LRPKVLVADEPTSALDVSVQARVLALLQEIQK 481 Query: 536 DLGNTVIVVEHDEDAIR-AADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSG 594 +L + V HD + AD ++ + G++V +GP E+I+ P+ Q + Sbjct: 482 ELQFACLFVSHDLAVVDLLADRIVVMNH------GKIVEQGPTESILRNPQHPYTQKLIA 535 Query: 595 KRKIEVPKKRVPAN 608 + P ++ Sbjct: 536 AVPLPDPDQQKERR 549 >UniRef50_Q2JPN6 Peptide/opine/nickel ABC transporter (PepT) family, ATP-binding protein n=5 Tax=Bacteria RepID=Q2JPN6_SYNJB Length = 603 Score = 232 bits (593), Expect = 4e-59, Method: Composition-based stats. Identities = 89/528 (16%), Positives = 167/528 (31%), Gaps = 53/528 (10%) Query: 422 YVENTPLPAISDMSIGHAMEFFN-NLKLAGQRAKIAEKILKEIGD-RLKFLVNVGLNYLT 479 + + I + +L EI ++ V L+ Sbjct: 101 RYRGSQIAMIFQEPSTALNPLYTCGQQLQETLRANTSLSPAEIRAQAIRLFEEVQLSPQM 160 Query: 480 LSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRD-LG 538 L R LSGG+ QR +A I + + + DEP+ L +L L L+ Sbjct: 161 LERYPHQLSGGQIQRAAIACAIASN--PQLLIADEPTTALDVTVQAEILRLLWELQQHRQ 218 Query: 539 NTVIVVEHDED-AIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRK 597 ++ + HD + AD V+ + G+ V +G +E I P+ + + R Sbjct: 219 MAILFITHDLNLVAELADQVVVMRR------GQAVEQGSVEQIFRDPQHPYTRGLLACRP 272 Query: 598 IEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPI 657 + + R + L+ G+ + V + V SG +L + L + Sbjct: 273 VLERRLRRLPTVQDFLEKGGSPEEQWQQVEIP---------AAVRVSGTESLEEERLRRL 323 Query: 658 AQRQ--LNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELF 715 + L + R ++ +D P G + Sbjct: 324 YSQPPLLQVRDLRTHYAVRRGPFGRQVGEIRAVDGISFDLYPGETLG-LVGESGCGKTTL 382 Query: 716 AGVPESRARGYTPGRF-SFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRE 774 R + ++++ F + Sbjct: 383 GRTLLRLVRASSGQVIYDGEELLRLPPQRLRRLRREIQLIFQDPAASLDPRMS------- 435 Query: 775 TLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGE 834 G ++ E + + +A AR + VGL L + SGG+ Sbjct: 436 ------VGASVIEPMAL----HGIGRNAAERRARAQRLFERVGLDPEALDRLPHQFSGGQ 485 Query: 835 AQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQ-GNTIVVIEHNLD 893 QR+ +AR L+ + L + DE + L + Q+L++L L+++ G + I H+L Sbjct: 486 RQRICIARALA---SEPRLIVCDEAVSSLDVSVQAQVLNLLKDLQEELGLAYLFISHDLS 542 Query: 894 VIK-TADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLKPML 940 V+K +D I+ + G I G + + R L Sbjct: 543 VVKFMSDRIMVMNR------GRIEELGPASQIYQQPQQDYTRRLIAAF 584 >UniRef50_C7R1Y2 ABC transporter related n=12 Tax=Actinobacteria (class) RepID=C7R1Y2_JONDD Length = 576 Score = 232 bits (592), Expect = 5e-59, Method: Composition-based stats. Identities = 82/525 (15%), Positives = 160/525 (30%), Gaps = 91/525 (17%) Query: 422 YVENTPLPAISDMSIGHAMEFF---NNLKLAGQRAKIAEKILKEIGDRLKFLVNVGL--- 475 + + + + + L + + IA E R L+ + Sbjct: 97 RMRGNDVAMVFQEPMTALNPVLTIGDQLTESLELHDIAH--GTEADARAVELLRMVGIPE 154 Query: 476 NYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLR 535 + + +SGG+ QR+ +A + + + DEP+ L +L L L+ Sbjct: 155 PERRVKQYPHEMSGGQRQRVVIALALACN--PRVIIADEPTTALDVTVQAEILDLLRSLK 212 Query: 536 DLGNT-VIVVEHDEDAI-RAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMS 593 D NT ++++ H+ + AD V + G++V G + ++ P+ + + Sbjct: 213 DKLNTGILLITHNMGVVADMADRVAVMFK------GDIVERGTADEVLTRPQHPYTKKLL 266 Query: 594 GKRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDT 653 ++ L G +L D Sbjct: 267 AAVPHLGRGPAQFGMRRTPVE--------------PLKPGQ-------------SLALDV 299 Query: 654 LFPIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRE 713 + + Q G + + V + +S G++ + A Sbjct: 300 QNLVVEYQRTGKAPFRAVD-DVTFSVAPGEIVGLVGESGSGKSTIARCALGL-------- 350 Query: 714 LFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNR 773 + A G A + +V + F + Sbjct: 351 IPAHSGSVSILGEDLHTI--------KRAQEKQLRRRVGVVFQDPASSLNPRFPIGDCIA 402 Query: 774 ETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGG 833 E L + G + L R + L V L + + LSGG Sbjct: 403 EPLVVHKVG------------------NRASQLKRVEELLEAVELPRTVINRYPHELSGG 444 Query: 834 EAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQ-GNTIVVIEHNL 892 + QRV +AR L + DEPT+ L + +L + +L+++ + + H+L Sbjct: 445 QRQRVSIARALV---LDPEFLVADEPTSALDVSVQASVLKMFLELQERYQFACIFVSHDL 501 Query: 893 DVIKT-ADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFL 936 VI A +V L G+I+ G+ + V + L Sbjct: 502 AVIDMLAHRVVVL------ENGQIVEQGSRDQVLGAPQQEYTKRL 540 Score = 137 bits (346), Expect = 2e-30, Method: Composition-based stats. Identities = 47/162 (29%), Positives = 76/162 (46%), Gaps = 15/162 (9%) Query: 783 KTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLG--QSATTLSGGEAQRVKL 840 TI + L ++ E + A AR ++ L VG+ Q +SGG+ QRV + Sbjct: 118 LTIGDQLTESL-ELHDIAHGTEADARAVELLRMVGIPEPERRVKQYPHEMSGGQRQRVVI 176 Query: 841 ARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNT-IVVIEHNLDVIK-TA 898 A L+ + I DEPTT L ++LD+L L+D+ NT I++I HN+ V+ A Sbjct: 177 ALALA---CNPRVIIADEPTTALDVTVQAEILDLLRSLKDKLNTGILLITHNMGVVADMA 233 Query: 899 DWIVDLGPEGGSGGGEILVSGTPETVAECEAS-HTARFLKPM 939 D + + G+I+ GT + V +T + L + Sbjct: 234 DRVAVM------FKGDIVERGTADEVLTRPQHPYTKKLLAAV 269 Score = 118 bits (297), Expect = 7e-25, Method: Composition-based stats. Identities = 58/374 (15%), Positives = 113/374 (30%), Gaps = 59/374 (15%) Query: 283 LGVQQYFDPDRVIQNPELSLAGG-AIRGWDRRNFYYFQMLKSLADHYK------------ 329 +GV + + G A R Y + L + H Sbjct: 226 MGVVADMADRVAVMFKGDIVERGTADEVLTRPQHPYTKKLLAAVPHLGRGPAQFGMRRTP 285 Query: 330 FDVEAPWGSLSANVHKVVLYGSGKENIEFKYMNDRGDTSIRRHPFEGVLHNMERRYKETE 389 + P SL+ +V +V +E++ ++ F + E Sbjct: 286 VEPLKPGQSLALDVQNLV--------VEYQRTGKAPFRAVDDVTFSVAPGEIVGLV--GE 335 Query: 390 SSAVREELAKFISNRPCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLA 449 S + + +A+ C + + V + L I + Sbjct: 336 SGSGKSTIAR---------CALGLIPAHSGSVSILGEDLHTIKRAQEKQLRRRVGVVFQD 386 Query: 450 GQRAK---------IAEKI-------LKEIGDRLKFLVN-VGLNYLTLSRSAETLSGGEA 492 + IAE + R++ L+ V L ++R LSGG+ Sbjct: 387 PASSLNPRFPIGDCIAEPLVVHKVGNRASQLKRVEELLEAVELPRTVINRYPHELSGGQR 446 Query: 493 QRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDL-GNTVIVVEHDEDAI 551 QR+ +A + L V DEP+ L +L + L++ I V HD I Sbjct: 447 QRVSIARALV--LDPEFLVADEPTSALDVSVQASVLKMFLELQERYQFACIFVSHDLAVI 504 Query: 552 R-AADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEVPKKRVPANPE 610 A V+ + G++V +G + ++ P+ + + + P ++ Sbjct: 505 DMLAHRVVVL------ENGQIVEQGSRDQVLGAPQQEYTKRLIAAAPVPEPGEQRRRREA 558 Query: 611 KVLKLTGARGNNLK 624 + L + Sbjct: 559 RYALLNQLGEQRTE 572 Score = 46.1 bits (108), Expect = 0.007, Method: Composition-based stats. Identities = 16/94 (17%), Positives = 31/94 (32%), Gaps = 5/94 (5%) Query: 605 VPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNG 664 A+ + + +K ++L + G + G SGSGKS L + Sbjct: 18 QFADLDVQFGTEFGSVHAVKGISLQVRPGEVLALVGESGSGKSVTSMTALGLLPSNARIN 77 Query: 665 ATIAEPAPYRDIQGLEHFDK-----VIDIDQSPI 693 I + + + + V + Q P+ Sbjct: 78 GDIRVTDKFVNKLDDKSLRRMRGNDVAMVFQEPM 111 >UniRef50_Q119Y6 ABC transporter related n=2 Tax=Oscillatoriales RepID=Q119Y6_TRIEI Length = 682 Score = 232 bits (592), Expect = 5e-59, Method: Composition-based stats. Identities = 95/506 (18%), Positives = 182/506 (35%), Gaps = 37/506 (7%) Query: 446 LKLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGL 505 ++L + +A ++I ++ L R LSGG+ QR+ +A I Sbjct: 195 VRLGQESEAVARLRQRKIMVKVNQKKL-----AMLDRYPHELSGGQIQRVMIAMAISCN- 248 Query: 506 VGVMYVLDEPSIGLHQRDNERLLGTLIHL-RDLGNTVIVVEHDEDAI-RAADHVIDIGPG 563 + + DEP+ L ++L L L + G ++I + HD I AD V + Sbjct: 249 -PTLLIADEPTTALDVTVQAKILDLLRELGKSRGMSIIFISHDLGVISEVADTVAVM--- 304 Query: 564 AGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIE----VPKKRVPANPEKVLKLTGAR 619 + G++V G ++ I + P+ + + R + V E+V+ +G Sbjct: 305 ---YQGKIVEYGDIKQIFSQPQHPYTKGLLACRPPLHNKVLRLPTVSDFMEEVINSSGEI 361 Query: 620 GNNLKDVTLTLPVGLFTCITGVSGSGKSTLI---NDTLFPIAQRQLNGATIAEPAPYRDI 676 K+ + P L + K+ ++ + + + A Sbjct: 362 EIREKNTAVAQPQNLDLPEKKAPQTAKNPILQVNHLRVGFPIKGMFGQTQRLLMAVNDVS 421 Query: 677 QGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESRARGYTPGRFSFNVR 736 + + + + +S G++ S T + F G + ++ G F Sbjct: 422 FTVSPGETLGLVGESGCGKSTLSRAILQLIPVTSGQVFFEGQEITNSQTGKLGIKKFLGS 481 Query: 737 GGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEA 796 ++ G+ + + C + + + T+ + + Sbjct: 482 LKNLQSKSGNNSNQ---EKYEQMLRRCRRDMQIIFQDPFGSLD-PRLTVGAAVMEPMLIH 537 Query: 797 REFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYIL 856 R L VGLT L + SGG+ QR+ +AR L+ L I Sbjct: 538 SVGNSFKVRRDRAAHLLERVGLTADSLSRYPYAFSGGQRQRICIARALA---LNPKLIIC 594 Query: 857 DEPTTGLHFADIQQLLDVLHKLRDQ-GNTIVVIEHNLDVIK-TADWIVDLGPEGGSGGGE 914 DE + L + Q+L++L +L+D+ G T + I H+L V+K +D I+ + G+ Sbjct: 595 DESVSALDVSVQAQVLNLLKELQDEFGLTYIFISHDLSVVKFMSDRIMVMKQ------GK 648 Query: 915 ILVSGTPETVAECEASHTARFLKPML 940 I G E V + R L + Sbjct: 649 IEEIGLAEQVYDQPQREYTRQLIASI 674 Score = 173 bits (438), Expect = 4e-41, Method: Composition-based stats. Identities = 76/332 (22%), Positives = 130/332 (39%), Gaps = 38/332 (11%) Query: 620 GNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLN-GATIAEPAPYRDIQG 678 + ++ + G I G SGSGKS T+ + + I + Sbjct: 22 VTAVDGISFRIKRGQTLGIVGESGSGKSVTSLATMGLLLAKSCQIQGEIWFNNLAENAYN 81 Query: 679 LEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESRARGYTPG-------RF 731 + + + DQ Y G + +F S YT G RF Sbjct: 82 SQPVNLLELSDQQ---------KQQYRG--GKISMIFQEPMSSLNPVYTIGFQLTEAIRF 130 Query: 732 SFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQC--KGKRYNRETLEIKYKGKTIHEVL 789 NV G + E+ LP+ V +C + ++++ L+ K+K + +++ Sbjct: 131 HQNVSLGEARRQAVS--LLQEVKLLPNDEVLRQKCLEEITEHSQDLLQAKFK-RGRAKIV 187 Query: 790 DMTIEEAREFFDAVPALARKLQTLMDVGLTYIRL---GQSATTLSGGEAQRVKLARELSK 846 D + A A+AR Q + V + +L + LSGG+ QRV +A +S Sbjct: 188 DEDSKPAVRLGQESEAVARLRQRKIMVKVNQKKLAMLDRYPHELSGGQIQRVMIAMAIS- 246 Query: 847 RGTGQTLYILDEPTTGLHFADIQQLLDVLHKL-RDQGNTIVVIEHNLDVI-KTADWIVDL 904 TL I DEPTT L ++LD+L +L + +G +I+ I H+L VI + AD + + Sbjct: 247 --CNPTLLIADEPTTALDVTVQAKILDLLRELGKSRGMSIIFISHDLGVISEVADTVAVM 304 Query: 905 GPEGGSGGGEILVSGTPETVAECEASHTARFL 936 G+I+ G + + + L Sbjct: 305 YQ------GKIVEYGDIKQIFSQPQHPYTKGL 330 Score = 119 bits (298), Expect = 7e-25, Method: Composition-based stats. Identities = 44/262 (16%), Positives = 93/262 (35%), Gaps = 30/262 (11%) Query: 339 LSANVHKVVLYGSGKENIEFKYMNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELA 398 LS + +++ SG+ E + + + + F G L N++ ++ +++ +E+ Sbjct: 443 LSRAILQLIPVTSGQVFFEGQEITNSQTGKLGIKKFLGSLKNLQ---SKSGNNSNQEKYE 499 Query: 399 KFISNRPCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEK 458 + + R + + S+ + + + Sbjct: 500 QML-----------------RRCRRDMQIIFQDPFGSLDPRLTVGAAVMEPMLIHSVGNS 542 Query: 459 ILKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIG 518 L VGL +LSR SGG+ QRI +A + L + + DE Sbjct: 543 FKVRRDRAAHLLERVGLTADSLSRYPYAFSGGQRQRICIARALA--LNPKLIICDESVSA 600 Query: 519 LHQRDNERLLGTLIHLRDL-GNTVIVVEHDEDAIR-AADHVIDIGPGAGVHGGEVVAEGP 576 L ++L L L+D G T I + HD ++ +D ++ + G++ G Sbjct: 601 LDVSVQAQVLNLLKELQDEFGLTYIFISHDLSVVKFMSDRIMVM------KQGKIEEIGL 654 Query: 577 LEAIMAVPESLTGQYMSGKRKI 598 E + P+ + + + Sbjct: 655 AEQVYDQPQREYTRQLIASIPM 676 >UniRef50_A3VG48 ABC oligopeptide transporter, fused ATPase subunits n=1 Tax=Rhodobacterales bacterium HTCC2654 RepID=A3VG48_9RHOB Length = 531 Score = 232 bits (591), Expect = 6e-59, Method: Composition-based stats. Identities = 94/522 (18%), Positives = 171/522 (32%), Gaps = 99/522 (18%) Query: 423 VENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDR-LKFLVNVGL--NYLT 479 + A+ + A ++ R ++ VGL Sbjct: 86 FRGGDVALCFQSP-RSALSPTRTVGKQMADRFRAHAPGGDLRARAVEAFKAVGLREPERQ 144 Query: 480 LSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGN 539 + R LSGG QR+ +A + + + DEP+ GL +L + G Sbjct: 145 IDRFPHELSGGMCQRVMIALALACS--PRVLIADEPTTGLDVTLTGEILDLIAAQARDGR 202 Query: 540 TVIVVEHDEDAI-RAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKI 598 V+++ HD A+ + D +I I G +V +GP + ++ P+S + + Sbjct: 203 GVLIISHDIAALSKVCDRLIVI------EAGRIVEDGPTQTVIHAPKSNYTRRLIDAVP- 255 Query: 599 EVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIA 658 ++ +KR + G + G Sbjct: 256 DIRRKRAVTDE---------------------KRGETLMVLSEVG--------------V 280 Query: 659 QRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGV 718 Q +PA + D + + +S G++ S T G+ P Sbjct: 281 TYQGRFGRNRKPALAGVNLEIRKGDTIAIVGESGSGKSTLSR--TIMGMLKP------TT 332 Query: 719 PESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEI 778 RG R SF + G ++M + + Sbjct: 333 GRVDFRGTDIARLSFGRKRGL--------RRHMQMVCQDPLDALNPR------------- 371 Query: 779 KYKGKTIHEVLDMTIEEAREFFDAVPALARKL--QTLMDVGLTYIRLGQSATTLSGGEAQ 836 ++ ++ + + + L + L +VGL + LSGG+AQ Sbjct: 372 ----MSVEDI----VSDPLRLVERDAMRRSALIDRALTEVGLDPSFRTRLPHELSGGQAQ 423 Query: 837 RVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRD-QGNTIVVIEHNLDVI 895 RV LAR L+ L +LDEPT+ L Q+L ++ +L + + V++ H+L + Sbjct: 424 RVGLARALA---IDPDLVVLDEPTSALDVTVQAQILTLIRRLTERRDRAYVMVSHDLATV 480 Query: 896 KT-ADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFL 936 + D +V + G I+ G E + S R L Sbjct: 481 RALCDRVVVVD------AGRIVEDGPTEQIFTDPKSPKTRAL 516 Score = 127 bits (318), Expect = 3e-27, Method: Composition-based stats. Identities = 45/237 (18%), Positives = 84/237 (35%), Gaps = 35/237 (14%) Query: 389 ESSAVREELAKFISNRPCASCEGTRLRREARHVYVENTPLP---------------AISD 433 ES + + L++ I L+ V T + + Sbjct: 312 ESGSGKSTLSRTIMGM---------LKPTTGRVDFRGTDIARLSFGRKRGLRRHMQMVCQ 362 Query: 434 MSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDRL-KFLVNVGLNYLTLSRSAETLSGGEA 492 + + + ++ E+ + + L VGL+ +R LSGG+A Sbjct: 363 DPLDALNPRMSVEDIVSDPLRLVERDAMRRSALIDRALTEVGLDPSFRTRLPHELSGGQA 422 Query: 493 QRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRD-LGNTVIVVEHDEDAI 551 QR+ LA + + + VLDEP+ L ++L + L + ++V HD + Sbjct: 423 QRVGLARALA--IDPDLVVLDEPTSALDVTVQAQILTLIRRLTERRDRAYVMVSHDLATV 480 Query: 552 R-AADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEVPKKRVPA 607 R D V+ + G +V +GP E I P+S + + + + A Sbjct: 481 RALCDRVVVV------DAGRIVEDGPTEQIFTDPKSPKTRALLDAAPHLADRPKEDA 531 >UniRef50_Q11IR9 ABC transporter related n=34 Tax=Alphaproteobacteria RepID=Q11IR9_MESSB Length = 544 Score = 231 bits (589), Expect = 1e-58, Method: Composition-based stats. Identities = 102/525 (19%), Positives = 176/525 (33%), Gaps = 90/525 (17%) Query: 416 REARHVYVENTPLPAISDMSIGHAM---EFFNNLKLAGQRAKIAEKILKEIGDRLKFLVN 472 EA + + I + + + A + E R L Sbjct: 74 PEAAMCRLRGDDIGMIFQEPMTALNPVKTIGQQVAEGIRWHTGANRADAESRAR-AMLER 132 Query: 473 VGLNYL--TLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGT 530 VGL L+R LSGG+ QR+ +A I L + + DEP+ L ++L Sbjct: 133 VGLPEKEFPLTRYPHELSGGQRQRVVIA--IACALKPKLLIADEPTTALDVVLQRQILTL 190 Query: 531 LIHL-RDLGNTVIVVEHDEDAI-RAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLT 588 L L + G +++++ HD + D + I GA + GE V I++ Sbjct: 191 LRELVNESGMSLLLISHDLAVVAEMTDRLTIIRDGAVMEAGETV------QILSRKTHPY 244 Query: 589 GQYMSGKRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKST 648 + ++ A + V ++ P G+G Sbjct: 245 TRQLAE-----------------------ASTHVPARVAISKP-----------GAG--- 267 Query: 649 LINDTLFPIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVF 708 P A L + P R + +D P + A G Sbjct: 268 -------PSAAPLLEVEGLTRDYPVRPAGLFARASRFRAVDHVSFSIFPGQSVA-LVGRS 319 Query: 709 TPVRELFAGVPESRARGYTPG-RFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCK 767 + A + + R + RF GGR E +++ F + + Sbjct: 320 GCGKSTLARMILALDRPSSGSIRFMGQEIGGRSEEALRPARRNMQVVFQDPYGSFDPRHR 379 Query: 768 GKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSA 827 +R + E L + A E A + L VGL+ + + + Sbjct: 380 VERL-------------VAEPLHL----ADEKPGAARRRDLVAEALEQVGLSPLDIDKYP 422 Query: 828 TTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQ-GNTIV 886 SGG+ QR+ +AR + R L + DEP + L + Q+LD+ L D+ G + Sbjct: 423 HEFSGGQRQRLAIARAIITR---PKLIVADEPVSALDVSIRAQILDLFADLNDRLGVAYL 479 Query: 887 VIEHNLDVIK-TADWIVDLGPEGGSGGGEILVSGTPETVAECEAS 930 I H+L V + D ++ + G+I+ +G E V + S Sbjct: 480 FITHDLRVARAITDTVLVMHE------GKIVETGPTEIVLDNPRS 518 Score = 120 bits (300), Expect = 4e-25, Method: Composition-based stats. Identities = 40/161 (24%), Positives = 66/161 (40%), Gaps = 14/161 (8%) Query: 783 KTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRL--GQSATTLSGGEAQRVKL 840 KTI + + I + A +R L VGL + LSGG+ QRV + Sbjct: 101 KTIGQQVAEGIR-WHTGANRADAESRARAMLERVGLPEKEFPLTRYPHELSGGQRQRVVI 159 Query: 841 ARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLR-DQGNTIVVIEHNLDVI-KTA 898 A + + L I DEPTT L +Q+L +L +L + G ++++I H+L V+ + Sbjct: 160 AIACALK---PKLLIADEPTTALDVVLQRQILTLLRELVNESGMSLLLISHDLAVVAEMT 216 Query: 899 DWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLKPM 939 D + + GE + + + R L Sbjct: 217 DRLTIIRDGAVMEAGETV------QILSRKTHPYTRQLAEA 251 Score = 115 bits (288), Expect = 9e-24, Method: Composition-based stats. Identities = 40/192 (20%), Positives = 70/192 (36%), Gaps = 28/192 (14%) Query: 415 RREARHVYVENTPLPAISDMSIGHAMEFFNNL---------------KLAGQRAKIAEKI 459 R + + + S+ ++ A + +L + +A++ Sbjct: 335 RPSSGSIRFMGQEIGGRSEEALRPARRNMQVVFQDPYGSFDPRHRVERLVAEPLHLADEK 394 Query: 460 LKEIGDR---LKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPS 516 R + L VGL+ L + + SGG+ QR+ +A I + V DEP Sbjct: 395 PGAARRRDLVAEALEQVGLSPLDIDKYPHEFSGGQRQRLAIARAIITR--PKLIVADEPV 452 Query: 517 IGLHQRDNERLLGTLIHLRDL-GNTVIVVEHDEDAIR-AADHVIDIGPGAGVHGGEVVAE 574 L ++L L D G + + HD R D V+ + H G++V Sbjct: 453 SALDVSIRAQILDLFADLNDRLGVAYLFITHDLRVARAITDTVLVM------HEGKIVET 506 Query: 575 GPLEAIMAVPES 586 GP E ++ P S Sbjct: 507 GPTEIVLDNPRS 518 >UniRef50_C1YT72 ATPase component of various ABC-type transport systems with duplicated ATPase domain n=1 Tax=Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 RepID=C1YT72_NOCDA Length = 601 Score = 231 bits (588), Expect = 1e-58, Method: Composition-based stats. Identities = 94/536 (17%), Positives = 172/536 (32%), Gaps = 60/536 (11%) Query: 416 REARHVYVENTPLPAISDMSIGHAMEFF---NNLKLAGQRAKIAEKILKEIGDRLKFLVN 472 + R + + + + F N L A + + ++ L Sbjct: 86 PDKRLRRMRGNDIAMVFQDPMQSLHPQFTVGNQLVEALRVHRSGVSRSLARERAVESLER 145 Query: 473 VGLNY--LTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGT 530 VG+ ++ SGG QR+ +A + + + DEP+ L ++L Sbjct: 146 VGIPEPAKRVNSYPHEFSGGMRQRVLIAMGLMCE--PKVLLADEPTTALDVTVQAQILDL 203 Query: 531 LIHLR-DLGNTVIVVEHDEDAIR-AADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLT 588 L LR DLG +I+V HD + + D V+ + G V G + +++ P Sbjct: 204 LDELRRDLGMALILVSHDLAVVAGSVDEVVVM------RHGVAVERGDVREVLSAPRHAY 257 Query: 589 GQYMSGKRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKST 648 + + + + + G R + G +G Sbjct: 258 TRGLLDA--VPRVEVSRAHRRARDRAERGQRQ------DQEKRRRSGSAAAGEAG----- 304 Query: 649 LINDTLFPIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGV- 707 R+ P + E +V D+ Q R AT Sbjct: 305 -----------RKGPDEVFRPFIPEPKEERGEPLLRVEDLAQRFRVRGGMWGRATDFWAV 353 Query: 708 ----FTPVRELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPC 763 F R + G S V ++ +P+ Sbjct: 354 KGVSFDLHRGE--TLGIVGESGSGKSTLSRMVMRLLEPTRGRVEFEGRDITHMPE-RALR 410 Query: 764 DQCKGKRYNRETLEIKYKGK-TIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIR 822 + + + + T+ + + T + D + + L VGL Sbjct: 411 PLRRDVQMVFQNPYSSLNPRVTVGDAIG-TALRVQGEKDGKKIRRQVQELLERVGLEPGH 469 Query: 823 LGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQ- 881 + SGG+ QR+ +AR L + L I DEP + L + Q+L +L +L+D Sbjct: 470 YNRFPHAFSGGQRQRIAIARALILK---PKLIICDEPVSALDVSTQDQVLRLLSELQDDF 526 Query: 882 GNTIVVIEHNLDVIK-TADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFL 936 G T + + H+L V++ +D + + GE++ G + V E S R L Sbjct: 527 GLTYIFVAHDLAVVRQVSDRVAVMR------AGEVVEMGDSDAVYENPTSDYTRQL 576 Score = 45.4 bits (106), Expect = 0.012, Method: Composition-based stats. Identities = 20/99 (20%), Positives = 33/99 (33%), Gaps = 7/99 (7%) Query: 601 PKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKS--TLINDTLFPIA 658 P RV + G + ++ +PVG I G SGSGKS +L L + Sbjct: 9 PVVRVEDLRVVFPTMDGD-VRAVDGLSFAVPVGGALGIVGESGSGKSVTSLALMGLHRGS 67 Query: 659 QRQLNGATIAEPAPYRDIQGLEHFD----KVIDIDQSPI 693 + ++ G + + Q P+ Sbjct: 68 RARITGEVEVAGTDVVGAPDKRLRRMRGNDIAMVFQDPM 106 >UniRef50_UPI0001C38A8A ABC transporter related protein n=1 Tax=Arthrospira platensis str. Paraca RepID=UPI0001C38A8A Length = 650 Score = 231 bits (588), Expect = 1e-58, Method: Composition-based stats. Identities = 97/516 (18%), Positives = 170/516 (32%), Gaps = 56/516 (10%) Query: 441 EFFNNLKL-AGQRAKIAEKI-LKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLA 498 + L+L I +E R+ L R LSGG+ QR+ +A Sbjct: 165 QILEQLQLETPPNDDINNPPSQREWQTRVNDQKRAFL-----DRYPHELSGGQLQRVMIA 219 Query: 499 SQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRD-LGNTVIVVEHDEDAI-RAADH 556 I + + DEP+ L +L L LRD G ++I + HD I AD Sbjct: 220 MAISCN--PTLLIADEPTTALDVTVQATILDLLRELRDRRGMSMIFITHDFGVIAEIADT 277 Query: 557 VIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEVPKK----RVPANPEKV 612 V + + G++V + + P+ + + R ++ A+ +V Sbjct: 278 VAVM------YQGKIVELNQINQLFTNPQHPYTKGLLACRPTLQTRRGAKLPTIADFMEV 331 Query: 613 LKLTGARGNNLKDVTLTLPVGLFTCITGVSGS-GKSTLI---NDTLFPIAQRQLNGATIA 668 + D +P + V + S L+ N + L G Sbjct: 332 FTTETGTEIRVIDHQENIPYDTLETVAKVPENPDDSPLLSVENLRVAFKIPGVLGGTQRL 391 Query: 669 EPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESRARGYTP 728 A + + + + +S G++ S + R +FAG + + Sbjct: 392 FMAVNDVSFDVFPGETLGLVGESGCGKSTLSRAILQLILPYSGRVIFAGEDITNYQPSGS 451 Query: 729 GRFSFNVRGGRCEACQGDGVIKVEMH--FLPDIYVPCDQCKGKRYNRETLEIKYKGKTIH 786 E Q ++ EM F + TI Sbjct: 452 WMNRLKDYRQHQEFQQKMKWVRREMQIVFQDPFSSLDPR-----------------LTIG 494 Query: 787 EVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSK 846 + + + + R L VGL + + SGG+ QR+ +AR L+ Sbjct: 495 DAVMEPLL-IHSVGNYKHRRDRTAYLLERVGLNPDFMRRYPHEFSGGQRQRICIARSLA- 552 Query: 847 RGTGQTLYILDEPTTGLHFADIQQLLDVLHKL-RDQGNTIVVIEHNLDVIK-TADWIVDL 904 I DE + L + Q+L++L +L R+ T + I H+L V+K +D I+ + Sbjct: 553 --LNPKFIICDESVSALDVSVQAQVLNLLKELQREFELTYIFISHDLSVVKFMSDRIIVM 610 Query: 905 GPEGGSGGGEILVSGTPETVAECEASHTARFLKPML 940 G+I G E + R L + Sbjct: 611 NQ------GKIEEIGDSEEIYRYPQQEYTRRLIASI 640 >UniRef50_D0LC89 ABC transporter related protein n=6 Tax=cellular organisms RepID=D0LC89_GORB4 Length = 867 Score = 231 bits (588), Expect = 1e-58, Method: Composition-based stats. Identities = 97/519 (18%), Positives = 165/519 (31%), Gaps = 89/519 (17%) Query: 430 AISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNVGLN--YLTLSRSAETL 487 S+ + + L +R + L L +V L L L Sbjct: 414 QDPSSSLNPLLTIEDQLTEGPRRHLGLSR-AAARERALTLLRDVHLPDPEARLRAYPHQL 472 Query: 488 SGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHL-RDLGNTVIVVEH 546 SGG+ QR+ +A + + V DE + L +++ + L R+ G V+ + H Sbjct: 473 SGGQRQRVMIAVALAC--DPDILVADEATTALDVTTQAQIIALVAELQRERGMAVVWISH 530 Query: 547 DEDAI-RAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEVPKKRV 605 D I R AD V+ + G VV G + I P+ Sbjct: 531 DLGVIGRIADDVMVM------REGRVVETGSVTDIFGNPQDEYT---------------- 568 Query: 606 PANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGA 665 + L L+ + + G Sbjct: 569 RRLLDARLLLSEVSERAPEAPDARAKQAPLVKVRG------------------------- 603 Query: 666 TIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESRARG 725 + R G + + D+D + T + V + G+ ES Sbjct: 604 -LGVDYTVRGATGRDTVHAITDVDLDVLRGTTLGIVGESGSGKSTVAGVLTGLIESGHGT 662 Query: 726 YTPGRFSFNVRGGRCEACQGDG------VIKVEMHFLPDIYVPCDQCKGKRYNRETLEIK 779 G V G +A G ++ M F + Sbjct: 663 AVRGSAEVTVDGRTIDAVGVRGADAAVLRRRLAMVFQDPAASLDPRMTA----------- 711 Query: 780 YKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVK 839 G+++ E + R +R Q + DV L L + +SGG+ QRV Sbjct: 712 --GRSVAE----PLRTHRLASGRDEMRSRAEQLMDDVSLDRSFLDRYPHEMSGGQRQRVC 765 Query: 840 LARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKL-RDQGNTIVVIEHNLDVIK-T 897 LAR L+ + + ILDE T L + +LD+L +L R++G T + I H+L V++ Sbjct: 766 LARALA---SDPEVLILDESTASLDVSVQANVLDLLAELQREKGLTYLFIAHDLAVVEQI 822 Query: 898 ADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFL 936 +D + + G ++ SG + + R L Sbjct: 823 SDTVAVM------QNGRVVESGPAVDILHNPETDYTRML 855 Score = 134 bits (337), Expect = 2e-29, Method: Composition-based stats. Identities = 56/295 (18%), Positives = 96/295 (32%), Gaps = 27/295 (9%) Query: 648 TLIND---TLFPIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPI--GRTPRSNPA 702 TL+ + P+ + G + P L D + + I G + Sbjct: 292 TLLRNRGKVRRPVVKAPGAGVRDGDERPVDGTPVLTVRDLTVGVGPREIVHGISFSVTAG 351 Query: 703 TYTGVFTPVRELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVP 762 G+ ++ FN E G +V + Sbjct: 352 QTLGI-------VGESGSGKSLSVLSATGLFNAPSAYVEGSARIGATEVIGASASTLRAL 404 Query: 763 CDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLT--Y 820 G + + + TI + L A R L L DV L Sbjct: 405 HGARVGFVFQDPSSSLN-PLLTIEDQLTEGPRRHLGL-SRAAARERALTLLRDVHLPDPE 462 Query: 821 IRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKL-R 879 RL LSGG+ QRV +A L+ + + DE TT L Q++ ++ +L R Sbjct: 463 ARLRAYPHQLSGGQRQRVMIAVALA---CDPDILVADEATTALDVTTQAQIIALVAELQR 519 Query: 880 DQGNTIVVIEHNLDVI-KTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTA 933 ++G +V I H+L VI + AD ++ + G ++ +G+ + Sbjct: 520 ERGMAVVWISHDLGVIGRIADDVMVMRE------GRVVETGSVTDIFGNPQDEYT 568 Score = 131 bits (329), Expect = 2e-28, Method: Composition-based stats. Identities = 105/623 (16%), Positives = 197/623 (31%), Gaps = 132/623 (21%) Query: 16 NINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQFLSLMEKPDVDH 75 I+ + + + + G SGSGKS L A G + SAY Sbjct: 343 GISFSVTAGQTLGIVGESGSGKS---LSVLSATG---LFNAPSAY--------------- 381 Query: 76 IEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLF-ARVGEPRCPDHDVPLAAQTVSQ 134 +EG + I ST LR L ARVG P ++ Sbjct: 382 VEG---SARIGATEVIGASAST----------LRALHGARVGFVF----QDPSSSLNPLL 424 Query: 135 MVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARIDGEVCDLSDPPKLEL 194 +++ L++ + L L +ER + + D E + P +L Sbjct: 425 TIEDQLTEGPRRHLGLSRAAARERALTLLRDVH----------LPDPEARLRAYPHQLSG 474 Query: 195 QKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVADMDDPKAEELLFSANFACP 254 ++ + + V + D +A+ TAL+++ ++A + + + E Sbjct: 475 GQRQRVMIAV---ALACDPDILVADEATTALDVTTQAQIIALVAELQRER---------- 521 Query: 255 ICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPELSLAGGAI-RGWDRR 313 G ++ + LGV D ++ + G++ + Sbjct: 522 --GMAVVWISHD----------------LGVIGRIADDVMVMREGRVVETGSVTDIFGNP 563 Query: 314 NFYYFQMLKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKENIEFKYMNDRGDTSIR--- 370 Y + L E + A + L +++ G ++ Sbjct: 564 QDEYTRRLLDARLLLSEVSERAPEAPDARAKQAPLVKVRGLGVDYTVRGATGRDTVHAIT 623 Query: 371 -------RHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGTRLRREARHVYV 423 R G++ ES + + +A ++ + GT +R A V V Sbjct: 624 DVDLDVLRGTTLGIVG---------ESGSGKSTVAGVLTGLIESG-HGTAVRGSA-EVTV 672 Query: 424 ENTPL-----------------PAISDMSIGHAMEFFNNLKLAGQRAKIAEKI--LKEIG 464 + + + + + + E+ Sbjct: 673 DGRTIDAVGVRGADAAVLRRRLAMVFQDPAASLDPRMTAGRSVAEPLRTHRLASGRDEMR 732 Query: 465 DRLKFL-VNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRD 523 R + L +V L+ L R +SGG+ QR+ LA + + + +LDE + L Sbjct: 733 SRAEQLMDDVSLDRSFLDRYPHEMSGGQRQRVCLARALAS--DPEVLILDESTASLDVSV 790 Query: 524 NERLLGTLIHL-RDLGNTVIVVEHDEDAIR-AADHVIDIGPGAGVHGGEVVAEGPLEAIM 581 +L L L R+ G T + + HD + +D V + G VV GP I+ Sbjct: 791 QANVLDLLAELQREKGLTYLFIAHDLAVVEQISDTVAVM------QNGRVVESGPAVDIL 844 Query: 582 AVPESLTGQYMSGKRKIEVPKKR 604 PE+ + + E P + Sbjct: 845 HNPETDYTRMLLDAIPPETPSRA 867 Score = 43.1 bits (100), Expect = 0.051, Method: Composition-based stats. Identities = 25/142 (17%), Positives = 39/142 (27%), Gaps = 6/142 (4%) Query: 595 KRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKS------T 648 + E P P + L + + ++ ++ G I G SGSGKS T Sbjct: 313 RDGDERPVDGTPVLTVRDLTVGVGPREIVHGISFSVTAGQTLGIVGESGSGKSLSVLSAT 372 Query: 649 LINDTLFPIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVF 708 + + + H +V + Q P Sbjct: 373 GLFNAPSAYVEGSARIGATEVIGASASTLRALHGARVGFVFQDPSSSLNPLLTIEDQLTE 432 Query: 709 TPVRELFAGVPESRARGYTPGR 730 P R L +R R T R Sbjct: 433 GPRRHLGLSRAAARERALTLLR 454 >UniRef50_C6CCU5 ABC transporter related n=4 Tax=Enterobacteriaceae RepID=C6CCU5_DICDC Length = 569 Score = 231 bits (588), Expect = 2e-58, Method: Composition-based stats. Identities = 93/523 (17%), Positives = 171/523 (32%), Gaps = 93/523 (17%) Query: 423 VENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKI--LKEIGDRLKFLVNVGL--NYL 478 V + + + + + +++ + + + L VG+ Sbjct: 104 VRGQRIGMVFQEPMSSMNPVLTVGEQIAEVLVRHQRLGWRQAQREAIALLERVGIVEPAR 163 Query: 479 TLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHL-RDL 537 + LSGG QR+ +AS I + + DEP+ L ++L L L R+ Sbjct: 164 RARQYIHQLSGGMRQRVMIASAISCK--PSLLIADEPTTALDVTIQAQILDLLQELQRER 221 Query: 538 GNTVIVVEHDEDAI-RAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKR 596 G V+++ HD + R A + H G +V +G + +++ P++ + + Sbjct: 222 GMGVLLITHDLGVVARYAHRACVM------HQGNIVEQGEVPVLLSCPQAAYTRKLIAAS 275 Query: 597 KIEVPK-KRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLF 655 + E ++V + ++KL + + + G + L Sbjct: 276 QPEPAAFRQVSESDNPLIKLENVTKSYAQPAAVPFFPGRS---------------HTVLH 320 Query: 656 PIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELF 715 + G V I +S G+T A F Sbjct: 321 AASITVERGEI------------------VGLIGESGSGKTTLGRMAIGLIPADDGVVEF 362 Query: 716 AGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRET 775 G+ N+ C + + ++ F Sbjct: 363 DGI---------------NLGRANCRQ-RRQLRRRAQIIFQDPYASLDPA---------- 396 Query: 776 LEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEA 835 ++ E + + A AR L VGL G+ SGG+ Sbjct: 397 -------MSVGEQIAEPLR-VHRLCPADEIPARVAALLTRVGLEPHHAGRRPGAFSGGQR 448 Query: 836 QRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQ-GNTIVVIEHNLDV 894 QR+ +AR L+ L + DE + L + Q+L +L +LR G +I+ I H+L Sbjct: 449 QRIVIARALA---LEPELLVADEAVSALDLSVRGQILALLGQLRATLGLSILFISHDLGA 505 Query: 895 IK-TADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFL 936 ++ D +V L G I+ GT E V + A R L Sbjct: 506 VRQICDRVVVLYH------GVIVERGTTEQVLDRPAHEYTRRL 542 Score = 123 bits (309), Expect = 3e-26, Method: Composition-based stats. Identities = 40/173 (23%), Positives = 67/173 (38%), Gaps = 13/173 (7%) Query: 428 LPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDRLKFLV-NVGLNYLTLSRSAET 486 + S+ AM + + ++ EI R+ L+ VGL R Sbjct: 385 IFQDPYASLDPAMSVGEQIAEPLRVHRLC--PADEIPARVAALLTRVGLEPHHAGRRPGA 442 Query: 487 LSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRD-LGNTVIVVE 545 SGG+ QRI +A + L + V DE L ++L L LR LG +++ + Sbjct: 443 FSGGQRQRIVIARALA--LEPELLVADEAVSALDLSVRGQILALLGQLRATLGLSILFIS 500 Query: 546 HDEDAIR-AADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRK 597 HD A+R D V+ + + G +V G E ++ P + + Sbjct: 501 HDLGAVRQICDRVVVL------YHGVIVERGTTEQVLDRPAHEYTRRLVAAAP 547 Score = 42.7 bits (99), Expect = 0.078, Method: Composition-based stats. Identities = 18/90 (20%), Positives = 28/90 (31%), Gaps = 9/90 (10%) Query: 623 LKDVTLTLPVGLFTCITGVSGSGK--STLINDTLFPIAQRQLNGATIAEP----APYRDI 676 + + ++ G + G SGSGK S L L P G + P Sbjct: 41 VNHIAFSVHAGEIVALVGESGSGKTLSALSLVGLLPEGLHHAAGEVCLDGQTIATPGNAY 100 Query: 677 QGLEHFDKVIDIDQSPIGRTPRSNPATYTG 706 ++ + Q P+ NP G Sbjct: 101 APQVRGQRIGMVFQEPMSSM---NPVLTVG 127 >UniRef50_Q0T6D3 Glutathione import ATP-binding protein gsiA n=254 Tax=cellular organisms RepID=GSIA_SHIF8 Length = 623 Score = 230 bits (586), Expect = 2e-58, Method: Composition-based stats. Identities = 101/553 (18%), Positives = 186/553 (33%), Gaps = 82/553 (14%) Query: 409 CEGTRLRREARHV------------YVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIA 456 C+ LRR +R V +V + I + F + + ++ Sbjct: 75 CDKMLLRRRSRDVIELSEQSAAQMRHVRGADMAMIFQEPMTSLNPVFTVGEQIAESIRLH 134 Query: 457 EKILKE--IGDRLKFLVNVGLNYLT--LSRSAETLSGGEAQRIRLASQIGAGLVGVMYVL 512 + +E + + + L V + LSR + LSGG QR+ +A + + + Sbjct: 135 QNASREEAMVEAKRMLDQVRIPEAQTILSRYSHQLSGGMRQRVMIAMALSCR--PAVLIA 192 Query: 513 DEPSIGLHQRDNERLLGTLIHL-RDLGNTVIVVEHDEDAI-RAADHVIDIGPGAGVHGGE 570 DEP+ L ++L + L +++ VI + HD + AD V+ I + GE Sbjct: 193 DEPTTALDVTIQAQILQLIKVLQKEMSMGVIFITHDMGVVAEIADRVLVI------YQGE 246 Query: 571 VVAEGPLEAIMAVPESLTGQYMSGKRKIEVPKKR-VPANPEKVLKLTGARGNNLKDVTLT 629 V G +E I P+ + + K ++ L Sbjct: 247 AVETGTVEQIFHAPQHPYTRALLAAVPQLGAMKGLDYPRRFPLISLE-------HPAKQE 299 Query: 630 LPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDID 689 P+ T + G L+ T FP+ LN T A + L + + + Sbjct: 300 PPIEQKTVVDGEPVLRVRNLV--TRFPLRSGLLNRVTREVHAVEKVSFDLWPGETLSLVG 357 Query: 690 QSPIGRTPRSNPATYTGVFTPVRELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVI 749 +S G++ +R + + E G S Sbjct: 358 ESGSGKSTTGRAL--------LRLVESQGGEIIFNGQRIDTLS--------PGKLQALRR 401 Query: 750 KVEMHFLPDIYVPCDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARK 809 ++ F + +TI + + + A AR Sbjct: 402 DIQFIFQDPYASLDPR-----------------QTIGDSIIEPLR-VHGLLPGKDAAARV 443 Query: 810 LQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQ 869 L VGL + SGG+ QR+ +AR L+ + I DE + L + Sbjct: 444 AWLLERVGLLPEHAWRYPHEFSGGQRQRICIARALA---LNPKVIIADEAVSALDVSIRG 500 Query: 870 QLLDVLHKL-RDQGNTIVVIEHNLDVI-KTADWIVDLGPEGGSGGGEILVSGTPETVAEC 927 Q++++L L RD G + I H++ V+ + + + + G+I+ G+ V E Sbjct: 501 QIINLLLDLQRDFGIAYLFISHDMAVVERISHRVAVM------YLGQIVEIGSRCAVFEN 554 Query: 928 EAS-HTARFLKPM 939 +T + L + Sbjct: 555 PQHPYTRKLLAAV 567 Score = 125 bits (315), Expect = 6e-27, Method: Composition-based stats. Identities = 54/367 (14%), Positives = 112/367 (30%), Gaps = 57/367 (15%) Query: 283 LGVQQYFDPDRVIQNPELSLAGGAIR-GWDRRNFYYFQMLKSLADHYK------------ 329 +GV ++ ++ G + + Y + L + Sbjct: 229 MGVVAEIADRVLVIYQGEAVETGTVEQIFHAPQHPYTRALLAAVPQLGAMKGLDYPRRFP 288 Query: 330 -FDVEAPWGSLSANVHKVVLYGSGKENIEFKYMNDRGDTSIRRHPFEGVLHNMERRYKET 388 +E P K V+ G + + G+L+ + R Sbjct: 289 LISLEHPAKQEPPIEQKTVVDGEPVLRVRNLVTRFPLRS--------GLLNRVTREVHAV 340 Query: 389 ESSAVREELAKFISNRPCASCEGT-------RLRR-EARHVYVENTPLPAISDMSIGHAM 440 E + + +S + + RL + + + +S + Sbjct: 341 EKVSFDLWPGETLSLVGESGSGKSTTGRALLRLVESQGGEIIFNGQRIDTLSPGKLQALR 400 Query: 441 EFFNNLKLAG-----QRAKIAEKILKEIG-----------DRLKFLVN-VGLNYLTLSRS 483 + R I + I++ + R+ +L+ VGL R Sbjct: 401 RDIQFIFQDPYASLDPRQTIGDSIIEPLRVHGLLPGKDAAARVAWLLERVGLLPEHAWRY 460 Query: 484 AETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHL-RDLGNTVI 542 SGG+ QRI +A + L + + DE L +++ L+ L RD G + Sbjct: 461 PHEFSGGQRQRICIARALA--LNPKVIIADEAVSALDVSIRGQIINLLLDLQRDFGIAYL 518 Query: 543 VVEHDEDAI-RAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEVP 601 + HD + R + V + + G++V G A+ P+ + + + P Sbjct: 519 FISHDMAVVERISHRVAVM------YLGQIVEIGSRCAVFENPQHPYTRKLLAAVPVAEP 572 Query: 602 KKRVPAN 608 ++ P Sbjct: 573 SRQRPQR 579 >UniRef50_A7MK51 Putative uncharacterized protein n=1 Tax=Cronobacter sakazakii ATCC BAA-894 RepID=A7MK51_ENTS8 Length = 449 Score = 230 bits (586), Expect = 3e-58, Method: Composition-based stats. Identities = 96/479 (20%), Positives = 164/479 (34%), Gaps = 89/479 (18%) Query: 464 GDRLKFLVNVGL--NYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQ 521 + + L +VG+ + LSGG QR+ +AS I + + DEP+ L Sbjct: 37 REAVALLGHVGIGEPEKRARQYIHQLSGGMRQRVMIASAISGK--PDLLIADEPTTALDV 94 Query: 522 RDNERLLGTLIHLRDL-GNTVIVVEHDEDAI-RAADHVIDIGPGAGVHGGEVVAEGPLEA 579 ++LG L L+ G V++V HD + R AD + GGE+V +GP+E Sbjct: 95 TLQAQILGLLKDLQQEMGMGVLLVTHDLSVVARYADRACVMN------GGEIVEQGPVEP 148 Query: 580 IMAVPESLTGQYMSGKRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCIT 639 + P++ + + + P RV A + P+ T I Sbjct: 149 LFTSPQADWTRRLIAASTPQEPPARVVARNDT-------------------PLLQVTGIV 189 Query: 640 GVSGSGKSTLINDTLFPIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRS 699 KS L + + + P + +G V I +S G+T Sbjct: 190 ------KSFARRARLPFMPAERQ---RVLHPTTFSVARGEI----VGLIGESGSGKTTLG 236 Query: 700 NPATYTGVFTPVRELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDI 759 A + F GV ++A R + +M F Sbjct: 237 RAAIGLIEADSGQIFFDGVDMAQASRTEQKRV----------------RRRAQMIFQDPY 280 Query: 760 YVPCDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLT 819 + ++ + L + R + + VGL Sbjct: 281 ASLDPR-----------------MSVGDQLAEPLR-VHGLRHGAAIAERVSELMTLVGLK 322 Query: 820 YIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLR 879 + SGG+ QR+ +AR L+ L + DE L Q+L +L +LR Sbjct: 323 PEWAQRRPAAFSGGQRQRIAIARALA---LEPELLVADEAVAALDLPVRGQILRLLAELR 379 Query: 880 DQ-GNTIVVIEHNLDVIK-TADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFL 936 D+ G +++ I H+L ++ D ++ L G ++ G V + A R L Sbjct: 380 DKLGLSVLFISHDLQAVRQLCDRVLVL------YLGNVVEEGPTRQVLQTPAHAYTRRL 432 Score = 122 bits (306), Expect = 6e-26, Method: Composition-based stats. Identities = 48/196 (24%), Positives = 78/196 (39%), Gaps = 20/196 (10%) Query: 412 TRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDRLKFLV 471 R+RR A+ ++ + MS+G + L++ G R A I +R+ L+ Sbjct: 266 KRVRRRAQMIFQDPYA-SLDPRMSVGD--QLAEPLRVHGLRHGAA------IAERVSELM 316 Query: 472 NVGLN-YLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGT 530 + R SGG+ QRI +A + L + V DE L ++L Sbjct: 317 TLVGLKPEWAQRRPAAFSGGQRQRIAIARALA--LEPELLVADEAVAALDLPVRGQILRL 374 Query: 531 LIHLRDL-GNTVIVVEHDEDAIR-AADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLT 588 L LRD G +V+ + HD A+R D V+ + + G VV EGP ++ P Sbjct: 375 LAELRDKLGLSVLFISHDLQAVRQLCDRVLVL------YLGNVVEEGPTRQVLQTPAHAY 428 Query: 589 GQYMSGKRKIEVPKKR 604 + + R Sbjct: 429 TRRLIDSAPDIHQALR 444 >UniRef50_Q11EZ7 ABC transporter related n=16 Tax=Bacteria RepID=Q11EZ7_MESSB Length = 593 Score = 229 bits (584), Expect = 4e-58, Method: Composition-based stats. Identities = 97/568 (17%), Positives = 183/568 (32%), Gaps = 145/568 (25%) Query: 415 RREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDRLKF-LVNV 473 R EA + + I + + + + + L +++ Sbjct: 79 RSEAEMRGIRGNRVAMIFQEPMTSLNPLMPVGEQIREAIMLHRNVSLAEAKALALDMLDK 138 Query: 474 GLNYLTLSRS---AETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGT 530 R SGG QR+ +A + + + DEP+ L ++L Sbjct: 139 VRIPSAAKRYGEIPHQFSGGMRQRVMIAMALACK--PELIIADEPTTALDVTIQAQILEL 196 Query: 531 LIHLRDL-GNTVIVVEHDEDAI-RAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLT 588 L LR+ +V+ + HD + AD V+ + G +V E + + P + Sbjct: 197 LRDLREEEDMSVLFITHDMGVVAEIADRVMVM------QNGSLVEEAEVRQLFRAPAASY 250 Query: 589 GQYMSGKRKI------------------EVPKKRVPANPEKVLKLTG------------- 617 + + + +VP PA+ +L + G Sbjct: 251 TRTLLEAVPVVGSMAGKDAPEAFKASTFKVPPSPRPAHDAPLLDVKGLTIRFDVRSGLFE 310 Query: 618 ---ARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAEPAPYR 674 AR + +++V+ ++ G + G SGSGK Sbjct: 311 RVSARVHAVENVSFSIGRGETLALVGESGSGK---------------------------- 342 Query: 675 DIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESRARGYTPGRFSFN 734 S IGR T G+ +R R + Sbjct: 343 ----------------STIGR-------TLVGLANCLRGEI--------------RVAGE 365 Query: 735 VRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKYKGKTIHEVLDMTIE 794 G C + + +V+M F + + R E L I+ Sbjct: 366 KEGSLCRTIE-ERRQRVQMIFQDPYASLDPRLRIGRALTEPLRIR--------------- 409 Query: 795 EAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLY 854 AL + + + V L+ L + SGG+ QR+ +AR LS + L Sbjct: 410 ----GVSERDALEQAAELMRLVRLSPDMLKRFPHEFSGGQRQRICIARALSVK---PALL 462 Query: 855 ILDEPTTGLHFADIQQLLDVLHKLRDQ-GNTIVVIEHNLDVI-KTADWIVDLGPEGGSGG 912 I DE + L + Q++D++ +L+ + + + I H++ V+ + + + + Sbjct: 463 IADEAVSALDVSIKAQIIDLMLELQQELDLSYLFISHDMAVVERLSHRVAVM------YL 516 Query: 913 GEILVSGTPETVAECEAS-HTARFLKPM 939 GEI+ G+ V E +T R L+ + Sbjct: 517 GEIVEMGSRRNVFENPQHPYTRRLLQAV 544 Score = 114 bits (286), Expect = 1e-23, Method: Composition-based stats. Identities = 32/193 (16%), Positives = 72/193 (37%), Gaps = 12/193 (6%) Query: 417 EARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNVGLN 476 E R V+ + S+ + L + ++E + + + V L+ Sbjct: 375 EERRQRVQM--IFQDPYASLDPRLRIGRALTEPLRIRGVSE--RDALEQAAELMRLVRLS 430 Query: 477 YLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRD 536 L R SGG+ QRI +A + + + + DE L +++ ++ L+ Sbjct: 431 PDMLKRFPHEFSGGQRQRICIARAL--SVKPALLIADEAVSALDVSIKAQIIDLMLELQQ 488 Query: 537 L-GNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGK 595 + + + HD + H + A ++ GE+V G + P+ + + Sbjct: 489 ELDLSYLFISHDMAVVERLSHRV-----AVMYLGEIVEMGSRRNVFENPQHPYTRRLLQA 543 Query: 596 RKIEVPKKRVPAN 608 + P++R+ + Sbjct: 544 VPVPDPERRMRRS 556 Score = 50.8 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 50/255 (19%), Positives = 79/255 (30%), Gaps = 41/255 (16%) Query: 616 TGARGNNLKDVTLTLPVGLFTCITGVSGSGKS--TLINDTLFPIAQRQLNGATIAEPAPY 673 +G + + + G + G SGSGKS L L P ++ G+ Sbjct: 17 SGNWTPVVHGIDFQVKRGETLAVVGESGSGKSVTALSVMRLLPPRTSRVEGSIKLGGDEL 76 Query: 674 RDIQGLEHF----DKVIDIDQS---------PIGRTPRSNPATYTGVFTPVRELFAGVPE 720 D E ++V I Q P+G R + V + A Sbjct: 77 LDRSEAEMRGIRGNRVAMIFQEPMTSLNPLMPVGEQIREAIMLHRNVSLAEAKALALDML 136 Query: 721 SRAR--------GYTPGRFSFNVRG----GRCEACQGDGVIKVEMHFLPDIYVPCDQCKG 768 + R G P +FS +R AC+ + +I E D+ + + Sbjct: 137 DKVRIPSAAKRYGEIPHQFSGGMRQRVMIAMALACKPELIIADEPTTALDVTIQAQILEL 196 Query: 769 KRYNRE-----TLEIKYKGKTIHEVLD--------MTIEEA-REFFDAVPALARKLQTLM 814 R RE L I + + E+ D +EEA PA + L Sbjct: 197 LRDLREEEDMSVLFITHDMGVVAEIADRVMVMQNGSLVEEAEVRQLFRAPAASYTRTLLE 256 Query: 815 DVGLTYIRLGQSATT 829 V + G+ A Sbjct: 257 AVPVVGSMAGKDAPE 271 >UniRef50_C7RUS4 Oligopeptide/dipeptide ABC transporter, ATPase subunit n=19 Tax=Bacteria RepID=C7RUS4_9PROT Length = 675 Score = 229 bits (584), Expect = 4e-58, Method: Composition-based stats. Identities = 89/549 (16%), Positives = 165/549 (30%), Gaps = 48/549 (8%) Query: 413 RLRREARHVYVENTPLPAISDMSIGHAMEFFN-NLKLAGQRAKIAEKILKEIGDRLKFLV 471 RL EA V + I +L+ + + R L+ Sbjct: 83 RL-PEAEMRGVRGGGMAMIFQEPATSLNPVLTVGHQLSEVLERHLGLAGQAARARALELL 141 Query: 472 NVGL---NYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLL 528 L LSGG QR+ +A + + + DEP+ L ++L Sbjct: 142 MAVGIADPERRLGEYPFQLSGGMKQRVMIAVALAGN--PSLLIADEPTTALDVTIQAQIL 199 Query: 529 GTLIHL-RDLGNTVIVVEHDEDAIR-AADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPES 586 L L + ++++ HD + A V + + GE+V E P A + P Sbjct: 200 ELLRRLQAERAMGMLLITHDLGVVAQMATRVGVM------YAGEIVEEAPRAAFFSSPRH 253 Query: 587 LTGQYMSGKRKIEVPKK----------RVPANPEKVLKLTGARGNNLKDVTLTLPVGLFT 636 Q + ++ + + + P Sbjct: 254 PYTQKLFAALPNLAQRRGRLETIPGQVPSLSEMPGGCRFAARCPHAWDRCRQQSPQWRQV 313 Query: 637 CITGVSGSGKSTLINDTLFPIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQS----P 692 + + L + ++G + E ++ +D P Sbjct: 314 AVGHRV---RCHLDDGQGAGAGSGGVSGTAVGGADAVAVQPMGE--PALLAVDDLRVYFP 368 Query: 693 IGRTPRSNPATYTGVFTPVRELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVE 752 I R + V A G + + + G +++ Sbjct: 369 IRRGILQRTVGHVRAVDGVSLELARGRTLALVGESGCGKTTVGKAILQLIMASAGSVRLL 428 Query: 753 MHFLPDIYVPCDQCKGKRYN--RETLEIKYKGK-TIHEVLDMTIEEAREFFDAVPALARK 809 L + + +R + + ++ E++ ++ A Sbjct: 429 GQELGGLSRSAQRPLRRRMQMIFQDPFASLNPRMSVGEIIGEGMQALGVDPQGEGRAAAI 488 Query: 810 LQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQ 869 L VGL G+ SGG+ QR+ +AR L+ + L I DEPT+ L + Sbjct: 489 AAVLRQVGLDVAAAGRYPHEFSGGQRQRIAIARALAVQ---PDLVICDEPTSALDVSVQA 545 Query: 870 QLLDVLHKL-RDQGNTIVVIEHNLDVIKT-ADWIVDLGPEGGSGGGEILVSGTPETVAEC 927 Q+L++L L D G + I HN V+ A + + G I+ GT + V Sbjct: 546 QILNLLATLQADLGLAYLFITHNFAVVDHLAHAVAVM------YLGRIVERGTVDEVLRS 599 Query: 928 EASHTARFL 936 + + L Sbjct: 600 PSHPYTQAL 608 Score = 128 bits (321), Expect = 1e-27, Method: Composition-based stats. Identities = 48/194 (24%), Positives = 77/194 (39%), Gaps = 15/194 (7%) Query: 752 EMHFLPDIYVPCDQCKGKRYNRETLEIKYKG-KTIHEVLDMTIEEAREFFDAVPALARKL 810 ++ LP+ + + G + T+ L + E A AR L Sbjct: 80 DLLRLPEAEMRGVRGGGMAMIFQEPATSLNPVLTVGHQLSE-VLERHLGLAGQAARARAL 138 Query: 811 QTLMDVGL--TYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADI 868 + LM VG+ RLG+ LSGG QRV +A L+ +L I DEPTT L Sbjct: 139 ELLMAVGIADPERRLGEYPFQLSGGMKQRVMIAVALAG---NPSLLIADEPTTALDVTIQ 195 Query: 869 QQLLDVLHKL-RDQGNTIVVIEHNLDVIK-TADWIVDLGPEGGSGGGEILVSGTPETVAE 926 Q+L++L +L ++ +++I H+L V+ A + + GEI+ Sbjct: 196 AQILELLRRLQAERAMGMLLITHDLGVVAQMATRVGVM------YAGEIVEEAPRAAFFS 249 Query: 927 CEASHTARFLKPML 940 + L L Sbjct: 250 SPRHPYTQKLFAAL 263 Score = 119 bits (299), Expect = 5e-25, Method: Composition-based stats. Identities = 37/207 (17%), Positives = 66/207 (31%), Gaps = 26/207 (12%) Query: 418 ARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEI-------------- 463 A V + L +S + + + + EI Sbjct: 422 AGSVRLLGQELGGLSRSAQRPLRRRMQMIFQDPFASLNPRMSVGEIIGEGMQALGVDPQG 481 Query: 464 ----GDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGL 519 L VGL+ R SGG+ QRI +A + + + + DEP+ L Sbjct: 482 EGRAAAIAAVLRQVGLDVAAAGRYPHEFSGGQRQRIAIARALA--VQPDLVICDEPTSAL 539 Query: 520 HQRDNERLLGTLIHL-RDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLE 578 ++L L L DLG + + H+ + H + A ++ G +V G ++ Sbjct: 540 DVSVQAQILNLLATLQADLGLAYLFITHNFAVVDHLAHAV-----AVMYLGRIVERGTVD 594 Query: 579 AIMAVPESLTGQYMSGKRKIEVPKKRV 605 ++ P Q + R Sbjct: 595 EVLRSPSHPYTQALLSAVPSPRLDARP 621 Score = 42.7 bits (99), Expect = 0.076, Method: Composition-based stats. Identities = 17/78 (21%), Positives = 25/78 (32%), Gaps = 6/78 (7%) Query: 621 NNLKDVTLTLPVGLFTCITGVSGSGKSTLINDT--LFPIAQRQLNGATIAEPAPYRDIQG 678 + V+ ++ G + G SG GKS L P A R + G + Sbjct: 27 TAVDGVSFSVAAGETLALLGESGCGKSATALGLLRLLPAAGRIVGGQMRFAGRDLLRLPE 86 Query: 679 LEHF----DKVIDIDQSP 692 E + I Q P Sbjct: 87 AEMRGVRGGGMAMIFQEP 104 >UniRef50_A0NTH5 Putative peptide transport system atp-binding abc transporter protein n=1 Tax=Labrenzia aggregata IAM 12614 RepID=A0NTH5_9RHOB Length = 560 Score = 229 bits (584), Expect = 4e-58, Method: Composition-based stats. Identities = 83/541 (15%), Positives = 172/541 (31%), Gaps = 96/541 (17%) Query: 410 EGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAE--KILKEIGDRL 467 R +A+ + + + + G+ K + Sbjct: 76 HDLRSLTDAQLTALRGNAISMVFQEPMTSLNPVLKIGDQVGEVFMRHRKFDRRKAMQAAQ 135 Query: 468 KFLVNVGLNY--LTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNE 525 + L V + L + LSGG QR+ +A + + + DEP+ L Sbjct: 136 EALDQVRIPEPARRLHQYPHELSGGLRQRVMIAMALACR--PKLLICDEPTTALDVTTQA 193 Query: 526 RLLGTLIHLRDL-GNTVIVVEHDEDAI-RAADHVIDIGPGAGVHGGEVVAEGPLEAIMAV 583 +L + +L+ G V+ + HD + AD V+ + GE++ E + + Sbjct: 194 EILTLIRNLQAEIGMGVLFITHDMGVVAEIADRVVVL------RNGEMMEEASVHDLFER 247 Query: 584 PESLTGQYMSGKRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSG 643 P++ + + G + +S Sbjct: 248 PKAAYTKALMAATPKPGSGSSTRQAGT----------------------GTVLEVACLST 285 Query: 644 --SGKSTLINDTLFPIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNP 701 +GKS L + L +++ + + G + +S G++ + Sbjct: 286 RFAGKSRL----FSRKSDGVLAVNSVSLKVAHGETLG--------LVGESGCGKSTLARS 333 Query: 702 ATYTGVFTPVRELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYV 761 + PES + + + + E + ++M F Sbjct: 334 ILHL-----------IEPESGSVWLDGKVLNSSSKQALRETRK-----DMQMVFQDPYAS 377 Query: 762 PCDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYI 821 + +HE++ + VGL Sbjct: 378 LNPRLP-----------------VHELITEPAR-IHGMVSRKNQKELAADLVERVGLERD 419 Query: 822 RLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKL-RD 880 + + A SGG+ QR+ +AR LS L I DE + L + +Q+ D++ +L R Sbjct: 420 AINRFAHQFSGGQRQRLCIARALSVE---PKLIIADEAVSALDVSIARQITDLMLELQRT 476 Query: 881 QGNTIVVIEHNLDVI-KTADWIVDLGPEGGSGGGEILVSGTPETVAECEAS-HTARFLKP 938 +G + + I H++ V+ + + I + GEI+ +G + + + +T R L Sbjct: 477 EGLSFLFISHDIGVVERVSHRIAVM------YKGEIVETGPTDRILKNPEHPYTRRLLSA 530 Query: 939 M 939 + Sbjct: 531 V 531 Score = 118 bits (297), Expect = 8e-25, Method: Composition-based stats. Identities = 41/219 (18%), Positives = 80/219 (36%), Gaps = 25/219 (11%) Query: 416 REARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGD---------- 465 E+ V+++ L + S ++ + + + + E+ Sbjct: 340 PESGSVWLDGKVLNSSSKQALRETRKDMQMVFQDPYASLNPRLPVHELITEPARIHGMVS 399 Query: 466 -------RLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIG 518 + VGL ++R A SGG+ QR+ +A + + + + DE Sbjct: 400 RKNQKELAADLVERVGLERDAINRFAHQFSGGQRQRLCIARAL--SVEPKLIIADEAVSA 457 Query: 519 LHQRDNERLLGTLIHL-RDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPL 577 L ++ ++ L R G + + + HD + H I A ++ GE+V GP Sbjct: 458 LDVSIARQITDLMLELQRTEGLSFLFISHDIGVVERVSHRI-----AVMYKGEIVETGPT 512 Query: 578 EAIMAVPESLTGQYMSGKRKIEVPKKRVPANPEKVLKLT 616 + I+ PE + + VPKKR ++ V Sbjct: 513 DRILKNPEHPYTRRLLSAVPSPVPKKRGMSSHPSVPLPR 551 >UniRef50_C5C220 ABC transporter related n=2 Tax=Actinobacteria (class) RepID=C5C220_BEUC1 Length = 538 Score = 229 bits (583), Expect = 5e-58, Method: Composition-based stats. Identities = 118/556 (21%), Positives = 181/556 (32%), Gaps = 118/556 (21%) Query: 415 RREARHVYVENTPLPAISDMSIGHAM---------EFFNNLKLAGQRAKIAEKILKEIGD 465 RR A V + L + + N+L A E + + Sbjct: 63 RRTAGSVRFDGQDLADLDPEELRRLRWVDLSTVFQSSMNSLNPVITVAAQFEDTFRAHDE 122 Query: 466 RL----------KFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEP 515 RL + L V L+ TL+ A LSGG QR+ LA + L +LDEP Sbjct: 123 RLSPADLRRRAVEALAMVSLDERTLTSYAHELSGGMRQRVSLALALA--LRPRFVLLDEP 180 Query: 516 SIGLHQRDNERLLGTLIHL-RDLGNTVIVVEHDE-DAIRAADHVIDIGPGAGVHGGEVVA 573 + GL R+L L L DLG V+ V HD + AD ++ + GE+V Sbjct: 181 TTGLDVLVQRRILDRLRALQADLGFAVLFVTHDIGAVLEMADRMLVMTE------GEIVE 234 Query: 574 EGPLEAIMAVPESLTGQYMSG---KRKIEVPKKRVPA-NPEKVLKLTGARGNNLKDVTLT 629 + ++ P Q + + VP + A PE VL++ R Sbjct: 235 DAAAADVLLRPAHPYTQSLLASYAATRTPVPHRAADAVEPEVVLRVEDVRRR-------- 286 Query: 630 LPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDID 689 V+G G++ L ++ +G A + Sbjct: 287 ----------YVTGRGRNRTAVQALDGVSLELRSGKVTA------------------LVG 318 Query: 690 QSPIGRTPRSNPATYTGVFTPVRELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVI 749 QS G++ + R LF V R + Sbjct: 319 QSGSGKSTIARMVLGVERPDSGRVLFGDVQVDALRRAGLRDY----------------RR 362 Query: 750 KVEMHFLPDIYVPCD-QCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALAR 808 V+M F G R L + G T +V R Sbjct: 363 HVQMVFQDPFASLNPTVPVGAALARPLL--NFGGATRADV-----------------RDR 403 Query: 809 KLQTLMDVGLTY--IRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFA 866 L VGLT L + LSGG+ QRV +AR L+ + + DEP + L + Sbjct: 404 AAALLEQVGLTPTAHYLERLPHQLSGGQRQRVVIARALA---PDPAILVADEPVSMLDVS 460 Query: 867 DIQQLLDVLHKL-RDQGNTIVVIEHNLDVIKT-ADWIVDLGPEGGSGGGEILVSGTPETV 924 ++L +L L ++ ++ I H+L + AD +V L G ++ G V Sbjct: 461 IRAEILALLASLVAERELAMLYITHDLLSARALADDVVVLSE------GAVVEHGPTARV 514 Query: 925 AECEASHTARFLKPML 940 E R L + Sbjct: 515 VEQPEHPYTRELLAAI 530 Score = 117 bits (292), Expect = 3e-24, Method: Composition-based stats. Identities = 60/343 (17%), Positives = 109/343 (31%), Gaps = 47/343 (13%) Query: 283 LGVQQYFDPDRVIQNPELSLAGGAIR-GWDRRNFYYFQMLKSLADHYKFDVEAPWGSLSA 341 +G ++ + A R Y Q L + + V P + A Sbjct: 214 IGAVLEMADRMLVMTEGEIVEDAAAADVLLRPAHPYTQSLLASYAATRTPV--PHRAADA 271 Query: 342 NVHKVVLYGSGKENIEFKYMNDRGDTSIRRHPFEGVLHNMER---RYKETESSAVREELA 398 +VVL E++ +Y+ RG +GV + +S + + +A Sbjct: 272 VEPEVVL---RVEDVRRRYVTGRGRNRTAVQALDGVSLELRSGKVTALVGQSGSGKSTIA 328 Query: 399 KFISNRPCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQR------ 452 + + R ++ V + + A+ + + Sbjct: 329 RMVLGVE---------RPDSGRVLFGDVQVDALRRAGLRDYRRHVQMVFQDPFASLNPTV 379 Query: 453 ---AKIAEKIL-------KEIGDRLKFLVNVGLN---YLTLSRSAETLSGGEAQRIRLAS 499 A +A +L ++ DR L+ L R LSGG+ QR+ +A Sbjct: 380 PVGAALARPLLNFGGATRADVRDRAAALLEQVGLTPTAHYLERLPHQLSGGQRQRVVIAR 439 Query: 500 QIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHL-RDLGNTVIVVEHDEDAIR-AADHV 557 + + V DEP L +L L L + ++ + HD + R AD V Sbjct: 440 ALA--PDPAILVADEPVSMLDVSIRAEILALLASLVAERELAMLYITHDLLSARALADDV 497 Query: 558 IDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEV 600 + + GA VV GP ++ PE + + Sbjct: 498 VVLSEGA------VVEHGPTARVVEQPEHPYTRELLAAIPDPY 534 Score = 47.7 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 23/107 (21%), Positives = 43/107 (40%), Gaps = 1/107 (0%) Query: 616 TGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQR-QLNGATIAEPAPYR 674 G + ++DV+L + G F + G SGSGKSTL N L + + + ++ Sbjct: 17 DGVPVDAVRDVSLVVDQGEFVGLVGESGSGKSTLGNAILQLLDKPARRTAGSVRFDGQDL 76 Query: 675 DIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPES 721 E ++ +D S + ++ ++ V + F E Sbjct: 77 ADLDPEELRRLRWVDLSTVFQSSMNSLNPVITVAAQFEDTFRAHDER 123 >UniRef50_C8Q309 ABC transporter related protein n=1 Tax=Pantoea sp. At-9b RepID=C8Q309_9ENTR Length = 546 Score = 228 bits (582), Expect = 6e-58, Method: Composition-based stats. Identities = 101/567 (17%), Positives = 191/567 (33%), Gaps = 103/567 (18%) Query: 389 ESSAVREELAKFISNRPCASCE--------GTR--LRREARHVYV-ENTPLPAISDM--- 434 ES + + A+ + A CE G R LR+ + V + + Sbjct: 43 ESGSGKSVTARALVGLSAAGCEVQARQLTFGDRPLLRQSEKEWRVLRGQSIGFVLQDALV 102 Query: 435 SIGHAMEFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNVGLNY--LTLSRSAETLSGGEA 492 S+ + + + Q + ++ L L VG+ + L + A LSGG Sbjct: 103 SLDPLRTIGDEIIESLQAHRWGTCSQRQ-ARMLALLEKVGIPHPALRARQRAGELSGGLR 161 Query: 493 QRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAI- 551 QR +AS + L + + DEP+ L +++G L +R G ++++ HD + + Sbjct: 162 QRALIASALA--LDPPILIADEPTTALDTTVQAQIIGLLQEIRQQGRGLLIISHDLNVVS 219 Query: 552 RAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEVPKKRVPANPEK 611 + AD VI + H G VV +G ++ ++ P+ + + Sbjct: 220 QLADEVIVM------HHGVVVEQGGVQQVLRHPQHDYTRQLLAAAPGSRQPDHRSQRQSG 273 Query: 612 VLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAEPA 671 + AR ++ T + T++ Sbjct: 274 EAAVLEARN-----------------------------LHKTYTRAHHQITAVDTVSFQL 304 Query: 672 PYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESRARGYTPGRF 731 + G+ I +S G+T + FAG+P + P + Sbjct: 305 YRGETLGI--------IGESGSGKTTTARMVMGLIEPDSGEVDFAGLPWVNPQAQPPLK- 355 Query: 732 SFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKYKGKTIHEVLDM 791 EA + + + + + + ++ + L++ Sbjct: 356 ---------EAQRRARRRALSIIYQDPLSSFDPRWSVRQILSDALDVI------------ 394 Query: 792 TIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQ 851 R L V L LSGG+ QRV +AR L+ T Sbjct: 395 -------GLPRSAHAERIAMLLEQVRLPLSLAEHWPKQLSGGQRQRVAIARALA---TEP 444 Query: 852 TLYILDEPTTGLHFADIQQLLDVLHKLRDQ-GNTIVVIEHNLDVIKT-ADWIVDLGPEGG 909 + + DEP + L + Q+LD+L+ L+ G + I H+L VI+ D ++ + Sbjct: 445 DVILCDEPVSALDASVQAQILDLLNTLQTSLGVAYLFISHDLAVIRHLCDRLLVMRD--- 501 Query: 910 SGGGEILVSGTPETVAECEASHTARFL 936 G+++ GT + + R L Sbjct: 502 ---GKVVEQGTVQEIFTRPQHAFTRQL 525 Score = 130 bits (327), Expect = 3e-28, Method: Composition-based stats. Identities = 53/245 (21%), Positives = 95/245 (38%), Gaps = 17/245 (6%) Query: 698 RSNPATYTGVFTPVRELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLP 757 R + ++ A V ES + R + CE + + L Sbjct: 21 RKRLVSNVSFRLAPGKVVALVGESGSGKSVTARALVGLSAAGCEVQARQ-LTFGDRPLLR 79 Query: 758 DIYVPCDQCKGK--RYNRETLEIKYKG-KTIHEVLDMTIEEAREFFDAVPALARKLQTLM 814 +G+ + + + +TI + + +++ A + AR L L Sbjct: 80 QSEKEWRVLRGQSIGFVLQDALVSLDPLRTIGDEIIESLQ-AHRWGTCSQRQARMLALLE 138 Query: 815 DVGLTYI--RLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLL 872 VG+ + R Q A LSGG QR +A L+ + I DEPTT L Q++ Sbjct: 139 KVGIPHPALRARQRAGELSGGLRQRALIASALA---LDPPILIADEPTTALDTTVQAQII 195 Query: 873 DVLHKLRDQGNTIVVIEHNLDVI-KTADWIVDLGPEGGSGGGEILVSGTPETVAECEASH 931 +L ++R QG +++I H+L+V+ + AD ++ + G ++ G + V Sbjct: 196 GLLQEIRQQGRGLLIISHDLNVVSQLADEVIVMHH------GVVVEQGGVQQVLRHPQHD 249 Query: 932 TARFL 936 R L Sbjct: 250 YTRQL 254 Score = 120 bits (301), Expect = 2e-25, Method: Composition-based stats. Identities = 33/176 (18%), Positives = 65/176 (36%), Gaps = 11/176 (6%) Query: 428 LPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTL-SRSAET 486 L I + ++ ++ + +R+ L+ L+L + Sbjct: 366 LSIIYQDPLSSFDPRWSVRQILSDALDVIGLPRSAHAERIAMLLEQVRLPLSLAEHWPKQ 425 Query: 487 LSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLR-DLGNTVIVVE 545 LSGG+ QR+ +A + + + DEP L ++L L L+ LG + + Sbjct: 426 LSGGQRQRVAIARALATE--PDVILCDEPVSALDASVQAQILDLLNTLQTSLGVAYLFIS 483 Query: 546 HDEDAIRA-ADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEV 600 HD IR D ++ + G+VV +G ++ I P+ + + Sbjct: 484 HDLAVIRHLCDRLLVM------RDGKVVEQGTVQEIFTRPQHAFTRQLLAASSFAP 533 >UniRef50_C5C0X6 ABC transporter related n=2 Tax=Actinomycetales RepID=C5C0X6_BEUC1 Length = 603 Score = 228 bits (582), Expect = 7e-58, Method: Composition-based stats. Identities = 93/528 (17%), Positives = 153/528 (28%), Gaps = 94/528 (17%) Query: 422 YVENTPLPAISDMSIGHAMEF----FNNLKLAGQRAKIAEKILKEIGDRLKFLVNVGLNY 477 V + I + F ++ + KE L LV + Sbjct: 98 RVRGKDISVIFQEPMTALNPVYTVGFQIVEALRVHQNLGPARAKERALELLRLVEIPEPE 157 Query: 478 LTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDL 537 LSGG+ QR +A + + V DEP+ L +L + LR Sbjct: 158 RRFDSYPHQLSGGQRQRAMIAQSLAN--DPTLLVADEPTTALDVTVQAEILKLMRDLRGR 215 Query: 538 GNT-VIVVEHDEDAI-RAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGK 595 N+ +I++ HD + AD ++ + G +V G AI P+ + + Sbjct: 216 INSGIILITHDMGVVADMADRIVVM------KNGRIVETGTAAAIFGAPQHPYTKQLLDA 269 Query: 596 RK-----IEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLI 650 P +R E + +T P G+S Sbjct: 270 VPHLGTHSTEPARREERRAELEAFSAAEPVMAATGLEITYPK-----------RGRSPAF 318 Query: 651 NDTLFPIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTP 710 P V + +S G+T G+ Sbjct: 319 RAV--------DGVDLTIAPGEV-----------VGLVGESGSGKTTIGRAV--VGLLP- 356 Query: 711 VRELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKR 770 V R + R Q V + F + Sbjct: 357 -------VSGGSLRIGGVDMVGATAKDLRPLRSQ------VGIVFQDPGSSLNPRLPI-- 401 Query: 771 YNRETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTL 830 G++I E L + + L V L + L Sbjct: 402 -----------GESIGEPLML-----HRGVKGAELARHVERLLDQVELPRSMRNRYPHEL 445 Query: 831 SGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKL-RDQGNTIVVIE 889 SGG+ QRV +AR LS L + DEPT+ L + ++L++ L R+ G + I Sbjct: 446 SGGQRQRVGIARALS---LEPKLLVADEPTSALDVSVQARVLELFQDLQREHGFACLFIS 502 Query: 890 HNLDVIKT-ADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFL 936 H+L V++ A I + G+++ G E V + L Sbjct: 503 HDLAVVEMLASRIAVMHH------GKLVEIGATEQVVSNPQDPYTQRL 544 Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats. Identities = 56/368 (15%), Positives = 110/368 (29%), Gaps = 42/368 (11%) Query: 283 LGVQQYFDPDRVIQNPELSLAGG-AIRGWDRRNFYYFQMLKSLADHYKFDVEAPWGSLSA 341 +GV V+ + G A + Y + L H P Sbjct: 227 MGVVADMADRIVVMKNGRIVETGTAAAIFGAPQHPYTKQLLDAVPHLGTHSTEPARREER 286 Query: 342 NVHKVVLYGSGKENIE--FKYMNDRGDTSIRRHPFEGVLHNMERRY---KETESSAVREE 396 + + + S +GV + ES + + Sbjct: 287 RAELEAFSAAEPVMAATGLEITYPKRGRSPAFRAVDGVDLTIAPGEVVGLVGESGSGKTT 346 Query: 397 LAKFISNRPCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAG-----Q 451 + + + G + + + + + + Sbjct: 347 IGRAVVGLL-PVSGG--------SLRIGGVDMVGATAKDLRPLRSQVGIVFQDPGSSLNP 397 Query: 452 RAKIAEKILK-----------EIGDRLKFLVN-VGLNYLTLSRSAETLSGGEAQRIRLAS 499 R I E I + E+ ++ L++ V L +R LSGG+ QR+ +A Sbjct: 398 RLPIGESIGEPLMLHRGVKGAELARHVERLLDQVELPRSMRNRYPHELSGGQRQRVGIAR 457 Query: 500 QIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHL-RDLGNTVIVVEHDEDAIR-AADHV 557 + L + V DEP+ L R+L L R+ G + + HD + A + Sbjct: 458 AL--SLEPKLLVADEPTSALDVSVQARVLELFQDLQREHGFACLFISHDLAVVEMLASRI 515 Query: 558 IDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEVPKKRVPANPEKVLKLTG 617 + H G++V G E +++ P+ Q + + P ++ + L Sbjct: 516 AVM------HHGKLVEIGATEQVVSNPQDPYTQRLIAAVPVPDPDEQRKRREMRDALLEA 569 Query: 618 ARGNNLKD 625 A G+ + Sbjct: 570 AAGDEDEH 577 Score = 43.8 bits (102), Expect = 0.028, Method: Composition-based stats. Identities = 18/86 (20%), Positives = 25/86 (29%), Gaps = 5/86 (5%) Query: 613 LKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAEPAP 672 + G DVT L G I G SGSGK+ L + + Sbjct: 27 FFVDGEWLPAAIDVTYDLHPGEVLAIVGESGSGKTQSSMSLLGLLPPNGRARGSATLGGR 86 Query: 673 YRDIQGLEHFDKV-----IDIDQSPI 693 + +V I Q P+ Sbjct: 87 ELIGMSTRNLRRVRGKDISVIFQEPM 112 >UniRef50_A1TS75 ABC transporter-related protein n=3 Tax=Comamonadaceae RepID=A1TS75_ACIAC Length = 570 Score = 228 bits (581), Expect = 9e-58, Method: Composition-based stats. Identities = 93/533 (17%), Positives = 175/533 (32%), Gaps = 75/533 (14%) Query: 416 REARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQ--RAKIAEKILKEIGDRLKFLVNV 473 E + + + + + + + K + ++ L Sbjct: 90 PEREMRGLRGGDIAMVFQEPMTALNPLMPVGRQIAEVLQLKQGLSHAQSAAQAVELLAAT 149 Query: 474 GLNY--LTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTL 531 G+ LSGG+ QR +A + + + + DEP+ L ++L L Sbjct: 150 GVPEPARRAGAYPHQLSGGQRQRAMIAMALASR--PRLLLADEPTTALDVTLRGQILELL 207 Query: 532 IHL-RDLGNTVIVVEHDEDAIRA-ADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTG 589 L R G V+++ HD +R AD V + G +V +G + + A P Sbjct: 208 SDLQRQTGMAVLLITHDLHLVRRFADRVAVMER------GVLVEQGTVAEVFAAPAHAYT 261 Query: 590 QYMSGKRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTL 649 + + G + V + A G + GL Sbjct: 262 RRLLGSVPRRDVIEDVVEDVGMDADSAPAAGAARAEPPAASARGLRVAYA---------- 311 Query: 650 INDTLFPIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFT 709 P+ + A + + + +S G++ + G+ Sbjct: 312 -----TPLPGLRGWFRRGEFVAVKDAYLVIHPGRTLGVVGESGSGKSTLAQ--ALLGLLP 364 Query: 710 PVRELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGK 769 F+G + R + + R A V++ F + Sbjct: 365 -----FSGDLQIAGRAWE-------LPVQRNSAANQALRRSVQVVFQDPFSSLSPR---- 408 Query: 770 RYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRL----GQ 825 T+ E++ + AR L DVGLT+ + G+ Sbjct: 409 -------------LTVEEIVGEGLRVHARQESEAGRRARVEAALADVGLTHAQFPGLLGR 455 Query: 826 SATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKL-RDQGNT 884 SGG+ QR+ +AR L L +LDEPT+ L QQ+L +L +L +++G + Sbjct: 456 YPHEFSGGQRQRIAIARALI---LEPRLLVLDEPTSALDVTIQQQVLVLLQRLQKERGLS 512 Query: 885 IVVIEHNLDVIK-TADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFL 936 ++I H++ VI+ A ++ + G+++ SG V + R L Sbjct: 513 YLLITHDVAVIRAMAHDVLVM------KDGDVVESGRMAQVLDAPRHPYTRRL 559 Score = 141 bits (356), Expect = 1e-31, Method: Composition-based stats. Identities = 69/340 (20%), Positives = 113/340 (33%), Gaps = 87/340 (25%) Query: 601 PKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQR 660 P VP + L++ + V + G + G SGSGK+ L A Sbjct: 8 PSSAVPLLRVEDLRVAFGGKAVVHGVGFDIGAGEKLALVGESGSGKTITALSLLRLAADA 67 Query: 661 QLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPE 720 +++G + + GR P + +PE Sbjct: 68 EVSGRALLQGR----------------------GRAPAQDLLA--------------LPE 91 Query: 721 SRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKY 780 RG G + M F + Sbjct: 92 REMRGLRGGD--------------------IAMVFQEPMTALNPLMP------------- 118 Query: 781 KGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYI--RLGQSATTLSGGEAQRV 838 G+ I EVL + ++ + A+ ++ L G+ R G LSGG+ QR Sbjct: 119 VGRQIAEVLQL-----KQGLSHAQSAAQAVELLAATGVPEPARRAGAYPHQLSGGQRQRA 173 Query: 839 KLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQ-GNTIVVIEHNLDVIKT 897 +A L+ R L + DEPTT L Q+L++L L+ Q G +++I H+L +++ Sbjct: 174 MIAMALASR---PRLLLADEPTTALDVTLRGQILELLSDLQRQTGMAVLLITHDLHLVRR 230 Query: 898 -ADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFL 936 AD + + G ++ GT V A R L Sbjct: 231 FADRVAVMER------GVLVEQGTVAEVFAAPAHAYTRRL 264 Score = 119 bits (298), Expect = 5e-25, Method: Composition-based stats. Identities = 39/180 (21%), Positives = 72/180 (40%), Gaps = 17/180 (9%) Query: 426 TPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDRLK---FLVNVGLNYLT--- 479 + + ++ G+ ++ + E G R + L +VGL + Sbjct: 392 RSVQVVFQDPFSSLSPRLTVEEIVGEGLRVHARQESEAGRRARVEAALADVGLTHAQFPG 451 Query: 480 -LSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHL-RDL 537 L R SGG+ QRI +A + L + VLDEP+ L +++L L L ++ Sbjct: 452 LLGRYPHEFSGGQRQRIAIARALI--LEPRLLVLDEPTSALDVTIQQQVLVLLQRLQKER 509 Query: 538 GNTVIVVEHDEDAIR-AADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKR 596 G + +++ HD IR A V+ + G+VV G + ++ P + + Sbjct: 510 GLSYLLITHDVAVIRAMAHDVLVMKD------GDVVESGRMAQVLDAPRHPYTRRLVAAA 563 >UniRef50_C7NGQ8 ATPase component of various ABC-type transport systems with duplicated ATPase domain n=1 Tax=Kytococcus sedentarius DSM 20547 RepID=C7NGQ8_KYTSD Length = 566 Score = 227 bits (580), Expect = 1e-57, Method: Composition-based stats. Identities = 86/529 (16%), Positives = 171/529 (32%), Gaps = 72/529 (13%) Query: 420 HVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDR--LKFLVNVGL-- 475 + L + + + +I + R ++ L +VG+ Sbjct: 97 MSRIRGLDLSMVFQEPMSALNPTMRVGDQVAEVMEIHGTARGDAAARRAVELLESVGITD 156 Query: 476 NYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLG-TLIHL 534 LSGG+ QR+ +A + + + DEP+ L +L L Sbjct: 157 AEGVARAHPHQLSGGQRQRVVIAIALAN--DPDVLICDEPTTALDVTVQATVLRQVLDGA 214 Query: 535 RDLGNTVIVVEHDEDAI-RAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMS 593 R+ ++ + HD + + + V+ + G+VV G + + P+ Q + Sbjct: 215 REHDAALLFITHDLAVVSQVCERVVVLKD------GQVVERGTVAEVFGAPQHPYTQALV 268 Query: 594 GKRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDT 653 ++ K L L G+ + G T + + Sbjct: 269 AASRL----KPRAGTGTTALDLAGSP-----GIDAVAEPGESTPPEAPAVA---VEDVRQ 316 Query: 654 LFPIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRE 713 ++ +R L A A +E ++ + +S G++ R Sbjct: 317 VYTRPRRSLFSARPQVVALDGVSLTVEPGERFGIVGESGSGKSTLLRLVAGLESPVSGRV 376 Query: 714 LFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNR 773 G S G E G V+M F + Sbjct: 377 EVLGRQVS----------------GVPERRLGWLREGVQMVFQDPRDSLDPR-------- 412 Query: 774 ETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGG 833 T+ +V+ + + + R + L VGL + + SGG Sbjct: 413 ---------MTVRDVVAEPL--VAQGWSGGDRDDRVAELLRRVGLEPSMMRRHPHQFSGG 461 Query: 834 EAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQ-GNTIVVIEHNL 892 + QR+ +AR L+ + + DEP + L + Q+LD++ +L D+ G T+V + H+L Sbjct: 462 QRQRISIARALA---PSPRVLLADEPVSALDVSVRGQVLDLIGELVDELGLTLVFVSHDL 518 Query: 893 DVIKT-ADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLKPML 940 V++ + + + GE++ E + + R L + Sbjct: 519 SVVRHVCERVAVMRR------GELVEVAPTEQLWSAPGTDYTRSLIEAI 561 >UniRef50_C3XJM3 ABC transporter ATP-binding protein n=2 Tax=Helicobacter RepID=C3XJM3_9HELI Length = 528 Score = 227 bits (579), Expect = 1e-57, Method: Composition-based stats. Identities = 94/528 (17%), Positives = 179/528 (33%), Gaps = 93/528 (17%) Query: 417 EARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKE--IGDRLKFLVN-V 473 E++ + + + + + + I + + + +R++ L++ V Sbjct: 74 ESKMQNLRGLKIGYVFQEPLSALNPLQKIHRQLSEAILIHNPKISKNVLQERMQELLHSV 133 Query: 474 GLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIH 533 L L LSGG+ QR+ LA + + + DEP+ L +++ L Sbjct: 134 QLPTSVLQAYPYALSGGQRQRVCLAIALAN--YPKILIADEPTTALDSTTQAQIIELLKS 191 Query: 534 LRDLGN-TVIVVEHDEDAI-RAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQY 591 L+ N +VI + H+ + + V+ + GE++ G + I P++ + Sbjct: 192 LQKTFNLSVIFISHNLAVVSKLCKRVLVMQK------GEIIESGERDEIFKTPKNAYTKM 245 Query: 592 MSGKRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLIN 651 + + + + ++++ P S GK+ Sbjct: 246 LLNALRF----------HYNMESFSKEIVLEASNLSVEYPRKK-------SFLGKTLESF 288 Query: 652 DTLFPIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPV 711 L P++ G ++ I +S G++ +N + Sbjct: 289 VALEPLSFVLRKGESLG------------------IIGESGSGKSSLANALCRLIDRDCI 330 Query: 712 RELFAGVPESRARGYTPGRFSFNVRGGRC-EACQGDGVIKVEMHFLPDIYVPCDQCKGKR 770 + FS R AC +++ F + + Sbjct: 331 KGEVKL--------LGKDFFSLKGSDLREFRAC-------MQLIFQDPFSSLNPKMNLFK 375 Query: 771 YNRETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTL 830 +E L+ +K ++ E +TL DVGL L + L Sbjct: 376 ILQEGLQAHFK-LSVAE-----------------QKRLIEKTLNDVGLDRNFLERYPNEL 417 Query: 831 SGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQ-GNTIVVIE 889 SGG+ QRV +AR L R + ILDEPT+ L A Q+L +L KL + + + I Sbjct: 418 SGGQRQRVSIARSLVLR---PKVLILDEPTSALDCAAQGQILGLLLKLAREYRLSYICIS 474 Query: 890 HNLDVIK-TADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFL 936 H+L VI ++ L G +L G + V + L Sbjct: 475 HDLSVIATLCQNVLVL------KDGRVLERGATKEVFNAPRDSYVKEL 516 Score = 128 bits (321), Expect = 1e-27, Method: Composition-based stats. Identities = 44/170 (25%), Positives = 68/170 (40%), Gaps = 11/170 (6%) Query: 773 RETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSG 832 +E L + IH L I R + L V L L LSG Sbjct: 90 QEPLSALNPLQKIHRQLSEAILIHNPKISKNVLQERMQELLHSVQLPTSVLQAYPYALSG 149 Query: 833 GEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQ-GNTIVVIEHN 891 G+ QRV LA L+ + I DEPTT L Q++++L L+ +++ I HN Sbjct: 150 GQRQRVCLAIALA---NYPKILIADEPTTALDSTTQAQIIELLKSLQKTFNLSVIFISHN 206 Query: 892 LDVI-KTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLKPML 940 L V+ K ++ + GEI+ SG + + + + + L L Sbjct: 207 LAVVSKLCKRVLVM------QKGEIIESGERDEIFKTPKNAYTKMLLNAL 250 Score = 116 bits (291), Expect = 4e-24, Method: Composition-based stats. Identities = 59/337 (17%), Positives = 107/337 (31%), Gaps = 42/337 (12%) Query: 283 LGVQQYFDPDRVIQNPELSLAGGAIR-GWDRRNFYYFQMLKSLAD-HYKFDVEAPWGSLS 340 L V ++ + G + Y +ML + HY S S Sbjct: 207 LAVVSKLCKRVLVMQKGEIIESGERDEIFKTPKNAYTKMLLNALRFHYNM------ESFS 260 Query: 341 ANVHKVVLYGSGKENIEFKYMNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKF 400 + S + + ++ ++ + P VL E ES + + LA Sbjct: 261 KEIVLEASNLSVEYPRKKSFLGKTLESFVALEPLSFVLRKGESLGIIGESGSGKSSLANA 320 Query: 401 ISNRPCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAG---------- 450 + C V + ++ + + Sbjct: 321 LCRLIDRDC-------IKGEVKLLGKDFFSLKGSDLREFRACMQLIFQDPFSSLNPKMNL 373 Query: 451 -----QRAKIAEKILKEIGDRL--KFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGA 503 + + K+ RL K L +VGL+ L R LSGG+ QR+ +A + Sbjct: 374 FKILQEGLQAHFKLSVAEQKRLIEKTLNDVGLDRNFLERYPNELSGGQRQRVSIARSLV- 432 Query: 504 GLVGVMYVLDEPSIGLHQRDNERLLGTLIHL-RDLGNTVIVVEHDEDAIR-AADHVIDIG 561 L + +LDEP+ L ++LG L+ L R+ + I + HD I +V+ + Sbjct: 433 -LRPKVLILDEPTSALDCAAQGQILGLLLKLAREYRLSYICISHDLSVIATLCQNVLVLK 491 Query: 562 PGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKI 598 G V+ G + + P + + I Sbjct: 492 D------GRVLERGATKEVFNAPRDSYVKELLQASII 522 Score = 46.5 bits (109), Expect = 0.004, Method: Composition-based stats. Identities = 20/83 (24%), Positives = 34/83 (40%), Gaps = 5/83 (6%) Query: 618 ARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQL-NGATIAEPAPYRDI 676 G LK++ L G F I G SGSGK+ L + L + + L +G ++ Sbjct: 13 VNGFCLKNINFCLKEGEFLGIVGESGSGKTLLSHLILRLVKEYNLQSGKIECLGENILEM 72 Query: 677 QGLEHFD----KVIDIDQSPIGR 695 + + K+ + Q P+ Sbjct: 73 LESKMQNLRGLKIGYVFQEPLSA 95 >UniRef50_A4XCW0 Oligopeptide/dipeptide ABC transporter, ATPase subunit n=49 Tax=cellular organisms RepID=A4XCW0_SALTO Length = 708 Score = 227 bits (579), Expect = 1e-57, Method: Composition-based stats. Identities = 96/548 (17%), Positives = 181/548 (33%), Gaps = 59/548 (10%) Query: 422 YVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKI-LKEIGDRLKFLVNVGL---NY 477 + + + + + ++ +++ E DR ++ Sbjct: 106 RIRGVRMGMVFQDPLTSLNPTIRIGAQVAEPLRVHKRVGRAEARDRAIEILRRVGMPRPE 165 Query: 478 LTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDL 537 + LSGG QR+ +A + + + DEP+ L ++L + LR+ Sbjct: 166 QIVDNYPHELSGGMRQRVAIAMALVCS--PSLLIADEPTTALDVTTQRQILELIDDLREE 223 Query: 538 -GNTVIVVEHDEDAIR-AADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGK 595 G VI+V HD I AD V + + G VV E + P + + Sbjct: 224 FGMAVILVTHDLGVIAGRADRVAVM------YAGRVVETAATEQLFQAPRHRYTEALM-- 275 Query: 596 RKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTC--ITGVSGSGKSTLINDT 653 R + R ++++ + G + +T G + VS S ++T + Sbjct: 276 RALPESAIRDSGGHDRLISIPGLPPDLSGPLT-----GCRFAPRCSYVSDSCRTT--DPA 328 Query: 654 LFPIAQRQLNGATIAEPAPYRDIQGLEHFDKVID-IDQSPIGRTPRSN----------PA 702 L P A + + P + + +P T P Sbjct: 329 LIPGAHQHACLHPVPTPTAAVTAPVPAPIEPATAPVTAAPPESTEPPVLSVRNLIKNYPV 388 Query: 703 TYTGVFTPVRELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMH-----FLP 757 G+ + V + F G ++ G + +E L Sbjct: 389 HGRGLLRRTAGQVSAVADVSFEVRPGETFGLVGESGCGKSTVGRLSVGLERASAGQIVLD 448 Query: 758 DIYVPCDQCKGKRYNRETLEIKYKGKTIHEVLDMTIE-------EAREFFDAVPALARKL 810 + + +R +++ ++ M ++ E ++ D AR Sbjct: 449 GTDLADLTGRERRRMHRHVQLMFQDSYAAMNPRMRVDAILAEPLEIQKVGDGSARQARIA 508 Query: 811 QTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQ 870 L VGL L + SGG+ QR+ LAR L+ R L + DEP + L + Q Sbjct: 509 TLLDQVGLPRRALERYPHEFSGGQLQRIGLARSLALR---PRLIVGDEPVSALDVSIQAQ 565 Query: 871 LLDVLHKL-RDQGNTIVVIEHNLDVIK-TADWIVDLGPEGGSGGGEILVSGTPETVAECE 928 +L+++ L R+ + I H+L V+ AD I + G+++ G V Sbjct: 566 VLNLMRDLQRELDLAYIFISHDLSVVDYMADRIGVM------YLGKLVEVGPAREVVRAA 619 Query: 929 ASHTARFL 936 + L Sbjct: 620 RHPYTQAL 627 Score = 151 bits (382), Expect = 1e-34, Method: Composition-based stats. Identities = 67/333 (20%), Positives = 106/333 (31%), Gaps = 95/333 (28%) Query: 614 KLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDT--LFPIAQRQLNGATIAEPA 671 L + L ++L + G + G SGSGK+ L P R G + E Sbjct: 35 ALRRGTVHALDGISLEVAPGQTLGVVGESGSGKTMTALSIMGLLPPGGRVTGGQILFE-- 92 Query: 672 PYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESRARGYTPGRF 731 GR RS PA VR R RG Sbjct: 93 ----------------------GRDLRSLPA------DEVR---------RIRG------ 109 Query: 732 SFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKYKGKTIHEVLDM 791 +++ M F + + E L + Sbjct: 110 -----------------VRMGMVFQDPLTSLNPTIRIGAQVAEPLRV------------- 139 Query: 792 TIEEAREFFDAVPALARKLQTLMDVGLT--YIRLGQSATTLSGGEAQRVKLARELSKRGT 849 + A R ++ L VG+ + LSGG QRV +A L Sbjct: 140 -----HKRVGRAEARDRAIEILRRVGMPRPEQIVDNYPHELSGGMRQRVAIAMALV---C 191 Query: 850 GQTLYILDEPTTGLHFADIQQLLDVLHKLRDQ-GNTIVVIEHNLDVIK-TADWIVDLGPE 907 +L I DEPTT L +Q+L+++ LR++ G ++++ H+L VI AD + + Sbjct: 192 SPSLLIADEPTTALDVTTQRQILELIDDLREEFGMAVILVTHDLGVIAGRADRVAVM--- 248 Query: 908 GGSGGGEILVSGTPETVAECEASHTARFLKPML 940 G ++ + E + + L L Sbjct: 249 ---YAGRVVETAATEQLFQAPRHRYTEALMRAL 278 >UniRef50_Q2T690 Dipeptide ABC transporter, ATP-binding protein, putative n=10 Tax=Bacteria RepID=Q2T690_BURTA Length = 662 Score = 227 bits (578), Expect = 2e-57, Method: Composition-based stats. Identities = 99/528 (18%), Positives = 179/528 (33%), Gaps = 38/528 (7%) Query: 422 YVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAE--KILKEIGDRLKFLVNVGLNYLT 479 V + I + F + + + + + + L+ L V + Sbjct: 103 TVRGADVAMIFQEPMTSLNPVFTVGDQISEAIALHQSKRAGEARAEALRLLDLVRIPEAR 162 Query: 480 L--SRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDL 537 +R LSGG QR+ +A + + + DEP+ L ++L + L+D Sbjct: 163 RVFARHPHQLSGGMRQRVMIAMALSCR--PALLIADEPTTALDVTIQAQILQLIRGLQDE 220 Query: 538 -GNTVIVVEHDEDAI-RAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGK 595 VI + HD + AD V+ + + GE V EG +AI A P + + Sbjct: 221 MDMGVIFITHDMGVVAEVADRVLVM------YRGEKVEEGASDAIFAAPSHPYTKALLAA 274 Query: 596 RKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCI-TGVSGSGKSTLINDTL 654 VP+ + K T R + + + + G + G+ G S ++ T Sbjct: 275 ----VPRLGSMRGTDAPAKFTLLRFDPVAGDAVVVAGGDASGASAGLVAPGAS--LDSTA 328 Query: 655 FPIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVR-E 713 A A A P + + P+ R + Y V E Sbjct: 329 STAAPAAHARAGGAFAQPAIAPASPPLLRVRELVTRFPLKRGVFGRVSQYVHAVERVSFE 388 Query: 714 LFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYV--PCDQCKGKRY 771 L AG + G+ S R G I+ E + + + ++ Sbjct: 389 LRAGETLALVGESGCGK-STTGRSLLRLVDSLSGSIEFEGREIGALKGRELQALRRDIQF 447 Query: 772 NRETLEIKYKGK-TIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTL 830 + + T+ + + A AR L VGL + Sbjct: 448 IFQDPFASLNPRLTVGFSIMEPLL-VHGVASGEQAQARVDWLLERVGLPADAARRYPHEF 506 Query: 831 SGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKL-RDQGNTIVVIE 889 SGG+ QR+ +AR L+ + I DE + L + Q+++++ L R+ G + I Sbjct: 507 SGGQRQRIAIARALA---LNPKVVIADESVSALDVSVQAQIVNLMLDLQRELGLAYLFIS 563 Query: 890 HNLDVI-KTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFL 936 H++ V+ + + + + G+I+ G V E R L Sbjct: 564 HDMAVVERISHRVAVM------YLGQIVEIGPRRAVFETPRHPYTRKL 605 Score = 122 bits (305), Expect = 1e-25, Method: Composition-based stats. Identities = 66/326 (20%), Positives = 105/326 (32%), Gaps = 81/326 (24%) Query: 613 LKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAEPAP 672 + GA ++D++ + G I G SGSGKS + + A Sbjct: 25 FRREGAAFVAVRDLSFHVDRGETLAIVGESGSGKSVTSLALMRLVEHGGGAIAGGEIALR 84 Query: 673 YRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESRARGYTPGRFS 732 R L+ + R S T G V +F S +T G Sbjct: 85 RRGGAVLD------------LARASPSTLRTVRGA--DVAMIFQEPMTSLNPVFTVG--- 127 Query: 733 FNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKYKGKTIHEVLDMT 792 I + KR E + + + +++ Sbjct: 128 ------------------------DQISEAIALHQSKR----AGEARAEALRLLDLVR-- 157 Query: 793 IEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQT 852 I EAR F P LSGG QRV +A LS R Sbjct: 158 IPEARRVFARHP-----------------------HQLSGGMRQRVMIAMALSCR---PA 191 Query: 853 LYILDEPTTGLHFADIQQLLDVLHKLRDQ-GNTIVVIEHNLDVI-KTADWIVDLGPEGGS 910 L I DEPTT L Q+L ++ L+D+ ++ I H++ V+ + AD ++ + Sbjct: 192 LLIADEPTTALDVTIQAQILQLIRGLQDEMDMGVIFITHDMGVVAEVADRVLVMYR---- 247 Query: 911 GGGEILVSGTPETVAECEASHTARFL 936 GE + G + + + + L Sbjct: 248 --GEKVEEGASDAIFAAPSHPYTKAL 271 >UniRef50_A6X3N3 ABC transporter related n=3 Tax=Rhizobiales RepID=A6X3N3_OCHA4 Length = 582 Score = 227 bits (578), Expect = 2e-57, Method: Composition-based stats. Identities = 86/528 (16%), Positives = 170/528 (32%), Gaps = 90/528 (17%) Query: 417 EARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKIL-KEIGDRLKFLVNVGL 475 EA V + I + + ++ + K+ K ++ Sbjct: 87 EAELTKVRGAEIGMIFQEPMTSLNPVLTIGTQIEESFRLHRGLTGKQAASAAKDALDRVR 146 Query: 476 NYLTLSR---SAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLI 532 R LSGG QR+ +A+ + + + DEP+ L +++ L Sbjct: 147 IPDAARRLKYCPNQLSGGMLQRVMIATALACN--PRLMIADEPTTALDVTVQAQIMALLA 204 Query: 533 HL-RDLGNTVIVVEHDEDAIR-AADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQ 590 L R+ G +I + HD + AD V+ + GE V +G L ++ P+ Q Sbjct: 205 ELKRETGMAMIFITHDIGLVAGMADKVMVM------QHGEAVEQGELNVVLDQPQHPYTQ 258 Query: 591 YMSGKRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLI 650 ++ K V + + K ++ +T+ P Sbjct: 259 HLLKAVPHFESGKAVRTDNVRAAKPGTNPILAVEGLTVRFP------------------- 299 Query: 651 NDTLFPIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTP 710 I R+L E + + G + + + +S G++ + + Sbjct: 300 --VKGGILGRRLGAVHAVESVDFDLVPG----ETLAVVGESGSGKSTTARAILGLVKASR 353 Query: 711 VRELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKR 770 + + R + V+M F + + Sbjct: 354 GKLEVGVADTADTRNSSS----------------------VQMVFQNPYASLNPRLR--- 388 Query: 771 YNRETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTL 830 I +L + A D + LQ L VGL L + Sbjct: 389 --------------IDSILAEPVIAAGGR-DGPETRQKMLQLLDRVGLPANSLERYPHEF 433 Query: 831 SGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKL-RDQGNTIVVIE 889 SGG+ QR+ +AR L ++ +LDE + L + ++L++L L +++G + + Sbjct: 434 SGGQRQRLCIARALM---LNPSVLVLDEAVSALDVSVQAKVLELLIDLQKERGLAYLFVS 490 Query: 890 HNLDVI-KTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFL 936 H++ V+ + A I G+I+ G ++ + L Sbjct: 491 HDMAVVERIAHRIAV------VYAGQIVEIGDAASILSAPKHSYTKRL 532 Score = 112 bits (281), Expect = 6e-23, Method: Composition-based stats. Identities = 39/153 (25%), Positives = 64/153 (41%), Gaps = 11/153 (7%) Query: 448 LAGQRAKIAEKILKEIGDR-LKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLV 506 LA + E + L+ L VGL +L R SGG+ QR+ +A + L Sbjct: 393 LAEPVIAAGGRDGPETRQKMLQLLDRVGLPANSLERYPHEFSGGQRQRLCIARALM--LN 450 Query: 507 GVMYVLDEPSIGLHQRDNERLLGTLIHL-RDLGNTVIVVEHDEDAI-RAADHVIDIGPGA 564 + VLDE L ++L LI L ++ G + V HD + R A + A Sbjct: 451 PSVLVLDEAVSALDVSVQAKVLELLIDLQKERGLAYLFVSHDMAVVERIAHRI------A 504 Query: 565 GVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRK 597 V+ G++V G +I++ P+ + + Sbjct: 505 VVYAGQIVEIGDAASILSAPKHSYTKRLISAVP 537 >UniRef50_A3K7U1 Putative ABC transporter ATP-binding protein n=1 Tax=Sagittula stellata E-37 RepID=A3K7U1_9RHOB Length = 610 Score = 226 bits (577), Expect = 2e-57, Method: Composition-based stats. Identities = 91/525 (17%), Positives = 176/525 (33%), Gaps = 34/525 (6%) Query: 425 NTPLPAISDMSIGHAMEFFN-NLKLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLT---L 480 + I + ++ A+I + + DR L L Sbjct: 88 GRDIGFIPQEPMSALNPSLTIGHQVCHHLARIGLRNARARTDRAVELFAEVGLDRPRALL 147 Query: 481 SRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNT 540 + LSGG QR+ +A + + + DEP+ L ++++ + R+ NT Sbjct: 148 TSYPHQLSGGMLQRVLIAMAFASN--PRLVIADEPTTALDVTIQKKVVELIARTREAHNT 205 Query: 541 -VIVVEHDEDA-IRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYM-SGKRK 597 V+ + HD D V + + G +V G I+ P + + Sbjct: 206 SVLFITHDLQLAAEICDDVSVL------YAGRIVETGAAGEIINAPRHPYSRCLNLATPN 259 Query: 598 IEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPI 657 + P R+ P+ + + P+ C T + + + Sbjct: 260 LTGPLSRLMILPKTMPGPAERSAMQGCEFATRCPLAQDPCHTTRPLLAEIAPGHASACHW 319 Query: 658 AQRQLNGATIA-EPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFA 716 +R + A + AP +G + + ++ + +R+L Sbjct: 320 PERTGSVAVPEAKEAPEGFARGSAPVLRATGLGKAYLQHDWLGRVRE----VQALRDLNF 375 Query: 717 GVPESRARGYTPGRFSFNVRGGR-CEACQGDGVIKVEMHFLPDIYVPCDQCKGKR-YNRE 774 + E G S + + K+E+ + P + K + Sbjct: 376 EIREGEFVGIVGESGSGKSSLTKMIVGLEDVTSGKLEVAGMDRTTTPREAFFDKVQLVFQ 435 Query: 775 TLEIKYKG-KTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGG 833 + ++I ++ +E A + L V L G+ LSGG Sbjct: 436 DPQSALNPRRSIASLVTQALEARPGSMPKAEQNALVTELLGKVMLPPEVAGRFPDQLSGG 495 Query: 834 EAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKL-RDQGNTIVVIEHNL 892 + QRV +AR L + +L I DE +GL + Q+L++L L R+ +++++ H+L Sbjct: 496 QKQRVNIARAL---CSNPSLLIADEIVSGLDVSVQAQILELLRALRREASFSLLLVSHDL 552 Query: 893 DVIKT-ADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFL 936 V++ D + + GEI+ G E V R L Sbjct: 553 AVVRHVCDRTLVM------CKGEIVEQGPVEEVFANPQHPYTREL 591 Score = 120 bits (301), Expect = 2e-25, Method: Composition-based stats. Identities = 33/154 (21%), Positives = 65/154 (42%), Gaps = 10/154 (6%) Query: 446 LKLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGL 505 + A + + ++ + L V L R + LSGG+ QR+ +A + + Sbjct: 451 VTQALEARPGSMPKAEQNALVTELLGKVMLPPEVAGRFPDQLSGGQKQRVNIARALCSN- 509 Query: 506 VGVMYVLDEPSIGLHQRDNERLLGTLIHLR-DLGNTVIVVEHDEDAIRA-ADHVIDIGPG 563 + + DE GL ++L L LR + ++++V HD +R D + + Sbjct: 510 -PSLLIADEIVSGLDVSVQAQILELLRALRREASFSLLLVSHDLAVVRHVCDRTLVMCK- 567 Query: 564 AGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRK 597 GE+V +GP+E + A P+ + + + Sbjct: 568 -----GEIVEQGPVEEVFANPQHPYTRELVAAAQ 596 >UniRef50_A9DTL3 ABC peptide transporter, duplicated ATPase domains n=1 Tax=Oceanibulbus indolifex HEL-45 RepID=A9DTL3_9RHOB Length = 534 Score = 226 bits (577), Expect = 3e-57, Method: Composition-based stats. Identities = 90/522 (17%), Positives = 171/522 (32%), Gaps = 89/522 (17%) Query: 423 VENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGD----RLKFLVNVGLNYL 478 + + I H + ++ + RL LV + Sbjct: 82 IRGKRIAMIFQSPASHLDPLMRIGDQVAETLHKHTQMRGQAVHDEVLRLLDLVQIPEPAR 141 Query: 479 TLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLR-DL 537 LSGG QR +A + + + DEP+ L + +L L LR + Sbjct: 142 WARAYPHQLSGGMKQRAMIAGALACQ--PDLLLADEPTTALDATVQKSVLDLLAQLRREQ 199 Query: 538 GNTVIVVEHDE-DAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKR 596 ++I V HD R D ++ + ++V GP+ ++ P+ + + Sbjct: 200 NLSMIFVSHDLGAVARVCDDLLVMRRS------KMVESGPVLRVIDAPQHDYTRKLIASH 253 Query: 597 KIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFP 656 + + V + G L + G G+S L Sbjct: 254 PDRLTLRPVAEASAGAPLIEGKG--------LRIRYG-----------GRS------LAD 288 Query: 657 IAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFA 716 + R+ G + A G + + + +S G++ + Sbjct: 289 LIARREGGFVAVQNANLSVRLG----ETLGIVGESGSGKSTLARSLVGL----------- 333 Query: 717 GVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETL 776 P R S + G + V+ + + ++ E L Sbjct: 334 ---------VKPQRGSVHFDG-----------MSVDPTGRDRVAYLREVQLIYQHPYEAL 373 Query: 777 EIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQ 836 T+ + + + A+ + VG+ G+ LSGGE Q Sbjct: 374 S---PRMTVARAIAEPLR-RHKLCPPGEVKAKVADLMEQVGIPDKLAGRYPRQLSGGECQ 429 Query: 837 RVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKL-RDQGNTIVVIEHNLDVI 895 RV +AR L+ + I DE T+ L Q++D+L KL +++G +++ I H+L VI Sbjct: 430 RVAIARALA---FDPRVLIADEVTSALDVTLQAQVMDLLLKLQKERGLSMIFISHDLAVI 486 Query: 896 -KTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFL 936 + + ++ + G+I+ SG V + + R L Sbjct: 487 RRLCNSVIVMRR------GQIVESGPTGAVFDNPSEAYTRQL 522 Score = 128 bits (322), Expect = 9e-28, Method: Composition-based stats. Identities = 64/344 (18%), Positives = 120/344 (34%), Gaps = 55/344 (15%) Query: 283 LGVQQYFDPDRVIQNPELSLAGGAI-RGWDRRNFYYFQMLKSLADHYKFDVEAPWGSLSA 341 LG D ++ + G + R D Y + L +A H P SA Sbjct: 210 LGAVARVCDDLLVMRRSKMVESGPVLRVIDAPQHDYTRKL--IASHPDRLTLRPVAEASA 267 Query: 342 NVHKVVLYGSGKENIEFKYMNDRGDTSIRRHPFEGVLH-NMERRYKET-----ESSAVRE 395 ++ G G I + + + R F V + N+ R ET ES + + Sbjct: 268 GA--PLIEGKG-LRIRYGGRSLADLIARREGGFVAVQNANLSVRLGETLGIVGESGSGKS 324 Query: 396 ELAKFISNRPCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQR--- 452 LA+ + ++ + V+ + + + + + ++L Q Sbjct: 325 TLARSLVGL---------VKPQRGSVHFDGMSVD----PTGRDRVAYLREVQLIYQHPYE 371 Query: 453 ---------AKIAEKILK-------EIGDRLKFLVNVGLNYLTL-SRSAETLSGGEAQRI 495 IAE + + E+ ++ L+ L R LSGGE QR+ Sbjct: 372 ALSPRMTVARAIAEPLRRHKLCPPGEVKAKVADLMEQVGIPDKLAGRYPRQLSGGECQRV 431 Query: 496 RLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHL-RDLGNTVIVVEHDEDAI-RA 553 +A + + + DE + L +++ L+ L ++ G ++I + HD I R Sbjct: 432 AIARALA--FDPRVLIADEVTSALDVTLQAQVMDLLLKLQKERGLSMIFISHDLAVIRRL 489 Query: 554 ADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRK 597 + VI + G++V GP A+ P + + Sbjct: 490 CNSVIVMRR------GQIVESGPTGAVFDNPSEAYTRQLIDAIP 527 Score = 46.1 bits (108), Expect = 0.006, Method: Composition-based stats. Identities = 18/87 (20%), Positives = 29/87 (33%), Gaps = 5/87 (5%) Query: 614 KLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKS---TLINDTLFPIAQRQLNGATIAEP 670 + + + ++ L G I G SGSGKS + L P A+ + Sbjct: 11 SVRFGQTTAVDGISFDLEKGASLGIVGESGSGKSVTCRALMRLLPPAAKISGTAQYDGQD 70 Query: 671 APYRDIQGLEHFD--KVIDIDQSPIGR 695 + L ++ I QSP Sbjct: 71 LLKMPLPALNQIRGKRIAMIFQSPASH 97 >UniRef50_C6C523 ABC transporter related n=1 Tax=Dickeya dadantii Ech703 RepID=C6C523_DICDC Length = 556 Score = 226 bits (576), Expect = 3e-57, Method: Composition-based stats. Identities = 84/534 (15%), Positives = 154/534 (28%), Gaps = 98/534 (18%) Query: 413 RLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDR----LK 468 R A + + + + K + + ++ ++ + Sbjct: 98 RYAAPAVLKALRGAQIGMVFQEPMTALNPVVICGKQMDEMLRAHSRMSRDERKAAILAIF 157 Query: 469 FLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLL 528 V + LSGG+ QRI +A + L + + DEP+ L +L Sbjct: 158 ARVQLPDPERIYHSYPHQLSGGQRQRIVIAMAVI--LRPRLLICDEPTTALDVTTQREIL 215 Query: 529 GTLIHLRDL-GNTVIVVEHDEDAI-RAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPES 586 + L+ G V+ + HD + AD V+ + H G VV +G ++ P Sbjct: 216 SLIRELQQENGCAVLFITHDMGVVAEIADDVLVM------HLGAVVEQGAAAQVLRQPSQ 269 Query: 587 LTGQYMSGKRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGK 646 + + VP + L A N T G+ Sbjct: 270 AYTRMLLDCVPDGVPCRSGDKQRGTPLLNADAVVKNYVRRTFL---------------GR 314 Query: 647 STLINDTLFPIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTG 706 + V + +S G++ Sbjct: 315 RQTVAALRDASLAVHYGET-------------------VGIVGESGSGKST--------- 346 Query: 707 VFTPVRELFAGVPESR-ARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQ 765 FA ++ E +V+M F + Sbjct: 347 --------FARCLMRLIDPSSGVIQWGEKAVQSLPERQLWSLRSQVQMVFQDPNRSFNPR 398 Query: 766 CKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREF-FDAVPALARKLQTLMDVGLTYIRLG 824 + G +I E A F A A + + L L Sbjct: 399 -------------RTVGSSIRE-------GAMNFGLSRESAQALAETLMDRIRLPRESLS 438 Query: 825 QSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKL-RDQGN 883 + SGG+ QR+ +AR L+ + + DE + L + QQ+L +L ++ RD G Sbjct: 439 RYPHQFSGGQRQRLAIARALA---CKPRVLVADEAVSALDVSVQQQILALLEEIQRDLGL 495 Query: 884 TIVVIEHNLDV-IKTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFL 936 ++ + H+L V + D ++ + G I+ G + R L Sbjct: 496 GMIFVTHDLRVAARLCDRLIVMQQ------GAIIEQGPTAQLFAAPQQAYTRSL 543 Score = 130 bits (328), Expect = 2e-28, Method: Composition-based stats. Identities = 55/347 (15%), Positives = 105/347 (30%), Gaps = 52/347 (14%) Query: 283 LGVQQYFDPDRVIQNPELSLAGGAIR-GWDRRNFYYFQMLKSL------ADHYKFDVEAP 335 +GV D ++ + + GA + + Y +ML P Sbjct: 236 MGVVAEIADDVLVMHLGAVVEQGAAAQVLRQPSQAYTRMLLDCVPDGVPCRSGDKQRGTP 295 Query: 336 WGSLSANVHKVVLYGSGKENIEFKYMNDRGDTSIRRHPFEGVLHNMERRYKETESSAVRE 395 + A V V + D G++ ES + + Sbjct: 296 LLNADAVVKNYVRRTFLGRRQTVAALRDASLAVHYGETV-GIVG---------ESGSGKS 345 Query: 396 ELAKFISNRPCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKI 455 A+ + S + + + ++ + + + R+ Sbjct: 346 TFARCLMRLIDPS---------SGVIQWGEKAVQSLPERQLWSLRSQVQMVFQDPNRSFN 396 Query: 456 AEK--------------ILKEIGDRLKF--LVNVGLNYLTLSRSAETLSGGEAQRIRLAS 499 + + +E L + + L +LSR SGG+ QR+ +A Sbjct: 397 PRRTVGSSIREGAMNFGLSRESAQALAETLMDRIRLPRESLSRYPHQFSGGQRQRLAIAR 456 Query: 500 QIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHL-RDLGNTVIVVEHDEDA-IRAADHV 557 + + V DE L +++L L + RDLG +I V HD R D + Sbjct: 457 ALACK--PRVLVADEAVSALDVSVQQQILALLEEIQRDLGLGMIFVTHDLRVAARLCDRL 514 Query: 558 IDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEVPKKR 604 I + G ++ +GP + A P+ + + V R Sbjct: 515 IVM------QQGAIIEQGPTAQLFAAPQQAYTRSLLQAMPRWVTPSR 555 Score = 49.2 bits (116), Expect = 7e-04, Method: Composition-based stats. Identities = 49/281 (17%), Positives = 81/281 (28%), Gaps = 43/281 (15%) Query: 597 KIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFP 656 I P L G R + ++D++LTL G C+ G SGSGKS L + Sbjct: 15 PIADPALLTIDRLRVALPAGGDRADAIEDLSLTLHPGQTLCVVGESGSGKSVLAMTLMGL 74 Query: 657 IAQRQLNGATIAEPAPYRDIQGLEHF----------DKVIDIDQSPI---------GRTP 697 +A + + ++ + Q P+ G+ Sbjct: 75 LAGELTVRHGTVRLGDTLLLNQGRYAAPAVLKALRGAQIGMVFQEPMTALNPVVICGKQM 134 Query: 698 RSNPATYTGVFTPVRE-----LFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIK-- 750 ++ + R+ +FA V G R VI Sbjct: 135 DEMLRAHSRMSRDERKAAILAIFARVQLPDPERIYHSYPHQLSGGQRQRIVIAMAVILRP 194 Query: 751 -----VEMHFLPDIYVPCDQCKGKRYNRE-----TLEIKYKGKTIHE----VLDMTIEEA 796 E D+ + R ++ L I + + E VL M + Sbjct: 195 RLLICDEPTTALDVTTQREILSLIRELQQENGCAVLFITHDMGVVAEIADDVLVMHLGAV 254 Query: 797 REFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQR 837 E A L + Q + L + G + G+ QR Sbjct: 255 VEQGAAAQVLRQPSQAYTRMLLDCVPDGVPCRS---GDKQR 292 >UniRef50_Q21J38 ABC transporter related n=2 Tax=Gammaproteobacteria RepID=Q21J38_SACD2 Length = 539 Score = 226 bits (576), Expect = 3e-57, Method: Composition-based stats. Identities = 75/530 (14%), Positives = 158/530 (29%), Gaps = 90/530 (16%) Query: 415 RREARHVYVENTPLPAISDMSIGHAMEFFN-NLKLAGQRAKIAEKILKEIGDRLKFLVNV 473 + EA V + I + +L + K+ ++ L+ Sbjct: 79 KTEAELRSVRGRKISMIFQDPMTSLNPHMRIGDQLIEAYRLHHKSTKKQATEKAIQLLQE 138 Query: 474 GLNYLTLSR---SAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGT 530 +R SGG QR +A + + + DEP+ L ++L Sbjct: 139 VGIKDADTRIRAYPHEFSGGMRQRAMIAMALITE--PELLIADEPTTALDVTVQAQILQL 196 Query: 531 LIHLRD-LGNTVIVVEHDEDAI-RAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLT 588 + ++ +VI + HD + + AD +I + G+VV G ++ + + Sbjct: 197 IKSIQQKRHLSVIFISHDLAVVSQIADQLIVMKE------GKVVESGATASVFSEQKHPY 250 Query: 589 GQYMSGKRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKST 648 + + + A K + +++ + Sbjct: 251 TKKL-------IAAIPNKAKQVKYTATETNPLLTVNNLSTSFAQETT------------- 290 Query: 649 LINDTLFPIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVF 708 A R++ I+ +I G + +S G++ Sbjct: 291 ---SWFGKKAARKVVVKDISFSIQQGEILG--------LVGESGSGKSTLGRSVIKLINA 339 Query: 709 TPVRELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKG 768 + + +T +M F + Sbjct: 340 DN-----GEINIDQHCIHTLQ-----------GDKLKQARKDFQMIFQDPYASLNPR--- 380 Query: 769 KRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSAT 828 T+ + L + + + + + DVGL + + Sbjct: 381 --------------LTVFDALAEPLL-LHGIANKTNVVEKVNTLMDDVGLARKFVRKYPH 425 Query: 829 TLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQG-NTIVV 887 SGG+ QR+ +AR L+ + L I DEP + L Q+L++L L + ++ Sbjct: 426 EFSGGQRQRIAIARALAPQ---PKLIIADEPVSALDVTIQAQILELLLNLTQKHCLAMLF 482 Query: 888 IEHNLDVIK-TADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFL 936 I H+L V++ D ++ + G ++ G E + + L Sbjct: 483 ISHDLAVVRYLCDRVMVMH------NGNLVEQGPTEDIYNQPTHPYTQTL 526 Score = 132 bits (333), Expect = 5e-29, Method: Composition-based stats. Identities = 49/342 (14%), Positives = 104/342 (30%), Gaps = 52/342 (15%) Query: 283 LGVQQYFDPDRVIQNPELSLAGGAIRG-WDRRNFYYFQMLKSLADHYKFDVEAPWGSLSA 341 L V ++ + GA + + Y + L + +A +A Sbjct: 215 LAVVSQIADQLIVMKEGKVVESGATASVFSEQKHPYTKKLIAA-----IPNKAKQVKYTA 269 Query: 342 NVHKVVLYGSGKENIEFKYMNDRGDTSIRRHPFEGVLHNMERRYKETE-------SSAVR 394 +L + F V+ ++ ++ E S + + Sbjct: 270 TETNPLL-TVNNLSTSFAQETTSWFGKKAARKV--VVKDISFSIQQGEILGLVGESGSGK 326 Query: 395 EELAKFISNRPCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQR-- 452 L + + + + ++ + + + A + F + Sbjct: 327 STLGRSVIKLI---------NADNGEINIDQHCIHTLQGDKLKQARKDFQMIFQDPYASL 377 Query: 453 -------AKIAEKILKE-------IGDRLKFLVNVGLNYLTLSR-SAETLSGGEAQRIRL 497 +AE +L + +++ L++ R SGG+ QRI + Sbjct: 378 NPRLTVFDALAEPLLLHGIANKTNVVEKVNTLMDDVGLARKFVRKYPHEFSGGQRQRIAI 437 Query: 498 ASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLG-NTVIVVEHDEDAIR-AAD 555 A + + + DEP L ++L L++L ++ + HD +R D Sbjct: 438 ARALA--PQPKLIIADEPVSALDVTIQAQILELLLNLTQKHCLAMLFISHDLAVVRYLCD 495 Query: 556 HVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRK 597 V+ + H G +V +GP E I P Q + Sbjct: 496 RVMVM------HNGNLVEQGPTEDIYNQPTHPYTQTLISAIP 531 Score = 122 bits (306), Expect = 6e-26, Method: Composition-based stats. Identities = 41/196 (20%), Positives = 75/196 (38%), Gaps = 33/196 (16%) Query: 750 KVEMHFLPDIYVPCDQCKGKRYNRETLE-IKYKGKTIHEVLDMTIEEAREFFDAVPALAR 808 K+ M F + R + +E + K+ A + Sbjct: 91 KISMIFQDPMTSLNP---HMRIGDQLIEAYRLHHKS----------------TKKQATEK 131 Query: 809 KLQTLMDVGL--TYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFA 866 +Q L +VG+ R+ SGG QR +A L T L I DEPTT L Sbjct: 132 AIQLLQEVGIKDADTRIRAYPHEFSGGMRQRAMIAMALI---TEPELLIADEPTTALDVT 188 Query: 867 DIQQLLDVLHKLRD-QGNTIVVIEHNLDVI-KTADWIVDLGPEGGSGGGEILVSGTPETV 924 Q+L ++ ++ + +++ I H+L V+ + AD ++ + G+++ SG +V Sbjct: 189 VQAQILQLIKSIQQKRHLSVIFISHDLAVVSQIADQLIVMKE------GKVVESGATASV 242 Query: 925 AECEASHTARFLKPML 940 + + L + Sbjct: 243 FSEQKHPYTKKLIAAI 258 Score = 48.4 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 23/100 (23%), Positives = 32/100 (32%), Gaps = 9/100 (9%) Query: 611 KVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPI---AQRQLNGATI 667 G + +V+ TL G I G SGSGKS L I + +NG+ + Sbjct: 12 HFYTREGLT-TAVDNVSFTLEAGQILGIVGESGSGKSVACYSLLGLIPSPPGKVVNGSAL 70 Query: 668 AEPAPYRDIQGLEHF----DKVIDIDQSPIGR-TPRSNPA 702 E K+ I Q P+ P Sbjct: 71 FNGEDLLTKTEAELRSVRGRKISMIFQDPMTSLNPHMRIG 110 >UniRef50_C6A8Q0 Dipeptide transport ATP-binding protein n=15 Tax=Actinobacteridae RepID=C6A8Q0_BIFLB Length = 687 Score = 226 bits (576), Expect = 4e-57, Method: Composition-based stats. Identities = 91/481 (18%), Positives = 163/481 (33%), Gaps = 75/481 (15%) Query: 463 IGDRLKFLVNVGLNYLTLSR---SAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGL 519 + DR+ L++ +R SGG QR +A + + + DEP+ L Sbjct: 256 MTDRIAGLLDEAGLPDAATRARQYPHEFSGGMRQRALIAIGLACR--PELLIADEPTSAL 313 Query: 520 HQRDNERLLGTLIHLRD-LGNTVIVVEHDEDAI-RAADHVIDIGPGAGVHGGEVVAEGPL 577 +R+L L L + LG V+ + HD A H++ + + G+VV GP Sbjct: 314 DVTVQKRILDHLQELTNSLGTAVLFITHDLGLAAERAQHIVVM------YKGQVVESGPS 367 Query: 578 EAIMAVPESLTGQYMSGKRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTC 637 ++ P+ + + + +R+ + EK T + + + L Sbjct: 368 LEVLQNPQHPYTKRLVAAAP-SLASQRIISVEEKGEDATSLMDHKVDEDKLE-------- 418 Query: 638 ITGVSGSGKSTLINDTLFPIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTP 697 S +I D + +L A + + + +S G++ Sbjct: 419 --------HSDVIIDVDHLTKEFKLPRRREMFKAVDDVSFKIRRGTTLAIVGESGSGKST 470 Query: 698 RSNPATYTGVFTPVRELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLP 757 +N T + L+ G +G + F V+ F Sbjct: 471 VANMVLRLLEPTSGKVLYNGQDIQEFKGKSLLDF----------------RRHVQPVFQN 514 Query: 758 DIYVPCDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVG 817 R E L I G D L R + L V Sbjct: 515 PYGSLDPMYSIYRSIEEPLRIHKIG------------------DKKSRLNRVKELLDMVE 556 Query: 818 LTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHK 877 L + + LSGG+ QR+ +AR ++ + + DE + L Q+L +L+ Sbjct: 557 LPESVMARYPNELSGGQRQRIAIARAMA---LNPDVIVCDEAVSALDVLVQDQVLHLLND 613 Query: 878 L-RDQGNTIVVIEHNLDVIK-TADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARF 935 L QG T + I H+L V++ AD +V + G+++ T + V + Sbjct: 614 LQAKQGLTYLFITHDLAVVRQIADDVVVMQH------GKLVEHDTTDEVFLHPQQQYTKD 667 Query: 936 L 936 L Sbjct: 668 L 668 Score = 146 bits (368), Expect = 4e-33, Method: Composition-based stats. Identities = 68/347 (19%), Positives = 120/347 (34%), Gaps = 37/347 (10%) Query: 616 TGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLF--PIAQRQLNGATIAEPAPY 673 G + +++ + ++ G + I G SGSGKST L P + G+ E Sbjct: 47 EGKPIHAVRNSSFSVYPGQWVAIVGESGSGKSTSAMACLGLLPGTGHVVGGSIKLEGQEI 106 Query: 674 RDIQGLEHFD----KVIDIDQSPIGR-TPRSNPATYT-GVFTPVRELFAGVPESR-ARGY 726 + K+ + Q P+ P T T A S ++ Sbjct: 107 SQYSPKQFASIRGSKMGLVPQDPMSNLNPVYRIGTQVKEALTANHMDVAHEKRSNLSKAL 166 Query: 727 TPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKR------YNRE-TLEIK 779 + G E G + + V GK + E + Sbjct: 167 AQADITIKSEGD--ETFLGSKELPELLEAAGQALVKAGVEGGKYEKRMAYFREEWVPGSE 224 Query: 780 YKGKTIHEVLDMTIEE------AREFFDAVPALARKLQTLMDVGLTY--IRLGQSATTLS 831 + + +++ +++ A+++ R L + GL R Q S Sbjct: 225 TRWRVADDLIKSGVKDDDAWYIAKKYVTGSTMTDRIAGLLDEAGLPDAATRARQYPHEFS 284 Query: 832 GGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQ-GNTIVVIEH 890 GG QR +A L+ R L I DEPT+ L +++LD L +L + G ++ I H Sbjct: 285 GGMRQRALIAIGLACR---PELLIADEPTSALDVTVQKRILDHLQELTNSLGTAVLFITH 341 Query: 891 NLDV-IKTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFL 936 +L + + A IV + G+++ SG V + + L Sbjct: 342 DLGLAAERAQHIVVM------YKGQVVESGPSLEVLQNPQHPYTKRL 382 Score = 131 bits (330), Expect = 1e-28, Method: Composition-based stats. Identities = 38/203 (18%), Positives = 70/203 (34%), Gaps = 27/203 (13%) Query: 414 LRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQR---------AKIAEKIL---- 460 L + V + S+ + I E + Sbjct: 479 LEPTSGKVLYNGQDIQEFKGKSLLDFRRHVQPVFQNPYGSLDPMYSIYRSIEEPLRIHKI 538 Query: 461 ---KEIGDRLKFLVNVG-LNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPS 516 K +R+K L+++ L ++R LSGG+ QRI +A + L + V DE Sbjct: 539 GDKKSRLNRVKELLDMVELPESVMARYPNELSGGQRQRIAIARAMA--LNPDVIVCDEAV 596 Query: 517 IGLHQRDNERLLGTLIHLRD-LGNTVIVVEHDEDAIR-AADHVIDIGPGAGVHGGEVVAE 574 L +++L L L+ G T + + HD +R AD V+ + G++V Sbjct: 597 SALDVLVQDQVLHLLNDLQAKQGLTYLFITHDLAVVRQIADDVVVM------QHGKLVEH 650 Query: 575 GPLEAIMAVPESLTGQYMSGKRK 597 + + P+ + + Sbjct: 651 DTTDEVFLHPQQQYTKDLLDAIP 673 >UniRef50_B7GSK8 ABC transporter related n=2 Tax=Bifidobacterium RepID=B7GSK8_BIFLI Length = 639 Score = 226 bits (576), Expect = 4e-57, Method: Composition-based stats. Identities = 94/530 (17%), Positives = 183/530 (34%), Gaps = 58/530 (10%) Query: 422 YVENTPLPAISDMSIGHAMEFFN-NLKLAGQRAKIAEKILKEIGDR-LKFLVNVGLN--Y 477 + + I + +L + + R +++L VGL Sbjct: 100 RLRGEGISMIFQEPMHSLNPVLRVGKQLGETIQVHSGASRESAWKRSVQWLKRVGLPNPE 159 Query: 478 LTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDL 537 ++ LSGG AQR+ +A + G + + DEP+ L +++ L+ L++ Sbjct: 160 RVMNMYPHELSGGMAQRVMIAIALCCG--PKLLIADEPTTALDVTIQAQIIHLLLKLKEE 217 Query: 538 -GNTVIVVEHDEDAI-RAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGK 595 G +++ + HD + AD+V+ + + G+VV G + I P+ + + Sbjct: 218 IGLSILFITHDFGVVAEVADYVVVM------YEGKVVEHGDVYGIFDHPQHPYTKALLET 271 Query: 596 RKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLF 655 R + GAR + L V +P + +SG +++D Sbjct: 272 RPM-----------------IGARRHRLPTVRDLVPR-----FSALSGGNSLAVLDDASA 309 Query: 656 PIAQRQLNGATIAEPAPYRDIQGLEHFDKVI-----DIDQSPIGRTPRSNPATYTGVFTP 710 P +G + +P + E +V + Q T GV Sbjct: 310 PEDGEWNHGRNDSRESPIALAKPDEPLVEVKHLKKYFVSQEGF---FSRTTHTVRGVNDV 366 Query: 711 VRELFAGVPESRARGYTPGRFSFNVRGGRCEACQ-GDGVIKVEMHFLPDIYVPCDQCKGK 769 E+F G G+ + R + G+ + F D D Sbjct: 367 SFEIFPGEAVGLVGESGSGKTTLGQTILRLQNKTSGEVRFRGRNIFDLDRDSLRDLRPQM 426 Query: 770 RYNRETLEIKYKGK-TIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSAT 828 +Y + + I + + E D R L G+ L + Sbjct: 427 QYIFQDPYSSLNPRLPIITAIGEPMLE-HGLADRTNVRDRVADVLRLCGMDADALDRYPH 485 Query: 829 TLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRD-QGNTIVV 887 SGG+ QR+ +AR + + + DEP L + Q++++ L++ +G T + Sbjct: 486 EFSGGQRQRIGIARAMGLK---PDFVVADEPVASLDVSVQAQIINLFSDLQERRGTTFMF 542 Query: 888 IEHNLDVIKT-ADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFL 936 I H+L V++ ++ + G I+ G+ E + + L Sbjct: 543 ISHDLSVVEHLCSRLMIM------YLGVIVEVGSREEIFSNPIHPYTKEL 586 Score = 125 bits (313), Expect = 1e-26, Method: Composition-based stats. Identities = 39/213 (18%), Positives = 71/213 (33%), Gaps = 28/213 (13%) Query: 413 RL-RREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQR---------AKIAEKILKE 462 RL + + V + + S+ + I E +L+ Sbjct: 395 RLQNKTSGEVRFRGRNIFDLDRDSLRDLRPQMQYIFQDPYSSLNPRLPIITAIGEPMLEH 454 Query: 463 -------IGDRLKFLVNVGLN-YLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDE 514 + DR+ ++ + L R SGG+ QRI +A +G L V DE Sbjct: 455 GLADRTNVRDRVADVLRLCGMDADALDRYPHEFSGGQRQRIGIARAMG--LKPDFVVADE 512 Query: 515 PSIGLHQRDNERLLGTLIHLRD-LGNTVIVVEHDEDAIRA-ADHVIDIGPGAGVHGGEVV 572 P L +++ L++ G T + + HD + ++ + + G +V Sbjct: 513 PVASLDVSVQAQIINLFSDLQERRGTTFMFISHDLSVVEHLCSRLMIM------YLGVIV 566 Query: 573 AEGPLEAIMAVPESLTGQYMSGKRKIEVPKKRV 605 G E I + P + + PK R Sbjct: 567 EVGSREEIFSNPIHPYTKELLDAIPAANPKGRH 599 Score = 51.5 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 26/101 (25%), Positives = 37/101 (36%), Gaps = 6/101 (5%) Query: 601 PKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDT--LFPIA 658 P RV + G + + DV+ +P G TC+ G SGSGKS T L Sbjct: 16 PLLRVRDLCVEFPLDGGEVRHAVNDVSFDVPQGSVTCLVGESGSGKSVTAMSTIDLVDEP 75 Query: 659 QRQLNGATIAEPAPYRDIQ--GLEHFD--KVIDIDQSPIGR 695 R + G + + LE + I Q P+ Sbjct: 76 GRIVGGTITFDGRDVLSLNHKNLERLRGEGISMIFQEPMHS 116 >UniRef50_B6J470 Oligopeptide transport ATP-binding protein n=3 Tax=Coxiella burnetii RepID=B6J470_COXB1 Length = 547 Score = 226 bits (575), Expect = 4e-57, Method: Composition-based stats. Identities = 92/536 (17%), Positives = 172/536 (32%), Gaps = 95/536 (17%) Query: 414 LRREARHVY-VENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDRLKFLVN 472 LR R + + + I +I L + Q +I +K + I R L+ Sbjct: 77 LRFSERTMRQIRGFKISMIFQDAISALNPV---LTIQQQMNEILKKKYRHIQSRALQLLE 133 Query: 473 VGLN---YLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLG 529 LSGG QR +A + M + DEP+ L ++L Sbjct: 134 EVGIKNSARVYHSYPHQLSGGMRQRAMIAMALAGE--PEMIIADEPTTALDVTIQAQVLS 191 Query: 530 TLIHLR-DLGNTVIVVEHDEDAI-RAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESL 587 L L+ + T++ + HD + + AD + + G VV + P+ Sbjct: 192 LLNRLKNERNITLLFISHDLGVVSQLADEIAVL------KAGRVVEHESRDQFFQQPKED 245 Query: 588 TGQYMSGKRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKS 647 + + K+ +L+ + + + G+F Sbjct: 246 YSRRLLAAIPTLETKRDTKTKATALLEAKALK------IYFPVKKGIF------------ 287 Query: 648 TLINDTLFPIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGV 707 +R++ + ++ G + + +S G+T + Sbjct: 288 -----------RRKVADIKAVDGISFKVPAG----KTLALVGESGSGKTTTAKAIVRLIA 332 Query: 708 FTPVRELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCK 767 T R F + R ++M F + Sbjct: 333 ITEGRIQFQSKNLVALSEWKMKRV----------------RKDIQMIFQDPYTSLNPRRM 376 Query: 768 GKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSA 827 I + L + + L + L VGL+ + Sbjct: 377 -----------------IADSLSEAMSAQKIIRKRQAQLNYMDELLKQVGLSPDYKWRYP 419 Query: 828 TTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGN-TIV 886 SGGE QR+ +AR L+ + L ILDEPT+ L + Q+L +L K++ + N + Sbjct: 420 HEFSGGERQRICIARALALK---PKLLILDEPTSALDVSIQMQILKLLEKIQKEHNIAYL 476 Query: 887 VIEHNLDVIK-TADWIVDLGPEGGSGGGEILVSGTPETVAECE-ASHTARFLKPML 940 +I HNL ++ A + + G+I+ G + + + S+T + P L Sbjct: 477 LITHNLGIVAYLAHEVAVMKE------GKIVEQGPTQLLLKDPSHSYTKNYWIPFL 526 Score = 127 bits (320), Expect = 1e-27, Method: Composition-based stats. Identities = 62/345 (17%), Positives = 109/345 (31%), Gaps = 98/345 (28%) Query: 602 KKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKS--TLINDTLFPIAQ 659 K + + + ++++L G + G SGSGKS L L P+ Sbjct: 2 PKPLIEINHLTVAFGRNAKPAISQLSVSLQRGQCLALVGESGSGKSMTALAVMQLLPLTA 61 Query: 660 RQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVP 719 + + + I +G F+ Sbjct: 62 QVSDRSQIL-------WEGKNLLR-------------------------------FSERT 83 Query: 720 ESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIK 779 + RG+ + M F I ++ E L+ K Sbjct: 84 MRQIRGFK-----------------------ISMIFQDAISALNPVLTIQQQMNEILKKK 120 Query: 780 YKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGL--TYIRLGQSATTLSGGEAQR 837 Y+ +R LQ L +VG+ + LSGG QR Sbjct: 121 YRH----------------------IQSRALQLLEEVGIKNSARVYHSYPHQLSGGMRQR 158 Query: 838 VKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLR-DQGNTIVVIEHNLDVI- 895 +A L+ + I DEPTT L Q+L +L++L+ ++ T++ I H+L V+ Sbjct: 159 AMIAMALAGE---PEMIIADEPTTALDVTIQAQVLSLLNRLKNERNITLLFISHDLGVVS 215 Query: 896 KTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLKPML 940 + AD I L G ++ + + + +R L + Sbjct: 216 QLADEIAVL------KAGRVVEHESRDQFFQQPKEDYSRRLLAAI 254 >UniRef50_A1WS13 ABC transporter related n=13 Tax=Proteobacteria RepID=A1WS13_VEREI Length = 588 Score = 225 bits (573), Expect = 7e-57, Method: Composition-based stats. Identities = 93/535 (17%), Positives = 174/535 (32%), Gaps = 92/535 (17%) Query: 411 GTRLRREARH--VYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDR-- 466 G L +R + + + + + + + R Sbjct: 80 GQDLAPASRAHLRSLRGAHIGMVFQEPMSSLNPSATIGAQLEEGLALHRPQWSKAMRRER 139 Query: 467 -LKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNE 525 L+ L VG+ L+ SGG QR+ LAS + L + + DEP+ L Sbjct: 140 VLEMLAQVGIPQAALAAWPHEFSGGMRQRMMLASVML--LEPALLIADEPTTALDAVVQR 197 Query: 526 RLLGTLIHL-RDLGNTVIVVEHDED-AIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAV 583 +L ++ L R+ V+++ HD R + +I + G V+ G A++A Sbjct: 198 DVLELMVKLTRERNTAVLLISHDLPMVARYTERLIVM------QQGAVIEAGNTAALLAA 251 Query: 584 PESLTGQYMSGKRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSG 643 P + + P + +P + L R + Sbjct: 252 PTQDYTRKLLAAIPRRQPARPLPQVKVQAPALIEVRRLAVD------------------- 292 Query: 644 SGKSTLINDTLFPIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPAT 703 +L +T A + ++ + V + S G++ Sbjct: 293 ------------YACHPRLFASTAARRVLHGIDLTVQPQEIVAVVGGSGSGKSTLGRAIA 340 Query: 704 YTGVFTPVRELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPC 763 + LF ++ RG R D + ++ F Sbjct: 341 GLIAPSAGEILF--KGQATRRGAPGWR---------------DYRLNCQVVFQDPYSSLD 383 Query: 764 DQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRL 823 + TI E++ + + R Q L +VGL Sbjct: 384 PR-----------------MTIAELVGEGLRQ-LGGMSNADKRERVAQMLQEVGLDSQYG 425 Query: 824 GQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQ-G 882 + A LSGG+ QRV +AR L + + I DEP + L Q+L++ +L+ + G Sbjct: 426 ERHAHELSGGQRQRVAIARALVRH---PSFVIADEPVSSLDVTVRAQVLELFAQLQQRHG 482 Query: 883 NTIVVIEHNLDVIK-TADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFL 936 + + I H+L V++ AD ++ + G I+ G+ + + + R L Sbjct: 483 FSCLFISHDLGVVEQIADRVLVMQD------GRIIEQGSRDAIFDQPQQAYTRAL 531 Score = 115 bits (287), Expect = 1e-23, Method: Composition-based stats. Identities = 42/223 (18%), Positives = 79/223 (35%), Gaps = 17/223 (7%) Query: 390 SSAVREELAKFISNRPCASCE-----GTRLRREARHVYVENTPLPAISDMSIGHAMEFFN 444 S + + L + I+ S G RR A + Sbjct: 328 SGSGKSTLGRAIAGLIAPSAGEILFKGQATRRGAPGWRDYRLNCQVVFQDPYSSLDPRMT 387 Query: 445 NLKLAGQ-RAKIAEKILKEIGDRL-KFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIG 502 +L G+ ++ + +R+ + L VGL+ R A LSGG+ QR+ +A + Sbjct: 388 IAELVGEGLRQLGGMSNADKRERVAQMLQEVGLDSQYGERHAHELSGGQRQRVAIARALV 447 Query: 503 AGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDL-GNTVIVVEHDEDAIR-AADHVIDI 560 + DEP L ++L L+ G + + + HD + AD V+ + Sbjct: 448 R--HPSFVIADEPVSSLDVTVRAQVLELFAQLQQRHGFSCLFISHDLGVVEQIADRVLVM 505 Query: 561 GPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEVPKK 603 G ++ +G +AI P+ + + + +P Sbjct: 506 ------QDGRIIEQGSRDAIFDQPQQAYTRALLSAIPVLLPTP 542 Score = 112 bits (281), Expect = 5e-23, Method: Composition-based stats. Identities = 38/178 (21%), Positives = 70/178 (39%), Gaps = 13/178 (7%) Query: 765 QCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLG 824 G + + TI L+ + R + R L+ L VG+ L Sbjct: 97 AHIGMVFQEPMSSLN-PSATIGAQLEEGLALHRPQWSKAMRRERVLEMLAQVGIPQAALA 155 Query: 825 QSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKL-RDQGN 883 SGG QR+ LA + L I DEPTT L + +L+++ KL R++ Sbjct: 156 AWPHEFSGGMRQRMMLASVML---LEPALLIADEPTTALDAVVQRDVLELMVKLTRERNT 212 Query: 884 TIVVIEHNLD-VIKTADWIVDLGPEGGSGGGEILVSGTPETVAECE-ASHTARFLKPM 939 +++I H+L V + + ++ + G ++ +G + +T + L + Sbjct: 213 AVLLISHDLPMVARYTERLIVMQQ------GAVIEAGNTAALLAAPTQDYTRKLLAAI 264 Score = 45.4 bits (106), Expect = 0.010, Method: Composition-based stats. Identities = 17/103 (16%), Positives = 34/103 (33%), Gaps = 6/103 (5%) Query: 603 KRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDT--LFPIAQR 660 R L + +++V+ ++ G F + G SGSGK+ + L P+ Sbjct: 11 ARHGLLEISGLSIAARGRAIVREVSFSVGAGEFVGLVGESGSGKTQVARAIMGLTPLPLV 70 Query: 661 QLNGATIAEPAPYRDIQGLEHFD----KVIDIDQSPIGRTPRS 699 + G+ + + + Q P+ S Sbjct: 71 RTAGSIVFAGQDLAPASRAHLRSLRGAHIGMVFQEPMSSLNPS 113 >UniRef50_C5C8D8 ATPase component of various ABC-type transport systems with duplicated ATPase domain n=21 Tax=Bacteria RepID=C5C8D8_MICLC Length = 584 Score = 225 bits (573), Expect = 7e-57, Method: Composition-based stats. Identities = 89/524 (16%), Positives = 167/524 (31%), Gaps = 85/524 (16%) Query: 431 ISDMSIGHAMEFFNNLKLAGQRAKIAEKI-LKEIGDRLKFLVNVGLNYLTLSR---SAET 486 + + + + G+ K++G + ++ R Sbjct: 116 VPQDPMSNLNPVTRVGQQIGETLLTHGMATKKDVGAAVVEVMERAGIPEPARRAKQYPHE 175 Query: 487 LSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHL-RDLGNTVIVVE 545 LSGG QR+ +A + + + DEP+ L + +L + + R+LG++V+++ Sbjct: 176 LSGGLRQRVLIAIGLACR--PQLLIADEPTSALDVTVQQVILDQIDEMTRELGSSVLLIT 233 Query: 546 HDEDAI-RAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEVPKKR 604 HD A ++ + H G VV G AI+ P+ + + + Sbjct: 234 HDLGLAAERAQQLVVM------HRGRVVESGDARAILEGPQHAYTRSLVAAAPSVAAAR- 286 Query: 605 VPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNG 664 L +T V+ L L P+ + + Sbjct: 287 -------------LLPEAFDPTPAALAEDDTAALTTVA------LAKQDLTPLVEIRDLT 327 Query: 665 ATIAEPAPYRDIQGLE---HFDK---VIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGV 718 + + V + +S G+T + T F G Sbjct: 328 KVYPVRGHEDFTAAKDVSLKIPRGKTVSIVGESGSGKTTTARMLLKLIEPTSGEIRFEGK 387 Query: 719 PESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEI 778 +G F +V+ F R E L+ Sbjct: 388 DVLALKGEGLKDF----------------RQRVQAVFQDPFSSLNPSFTVGRIIEEPLQT 431 Query: 779 KYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRV 838 +G +A AR L+ + V L + LSGG+ QRV Sbjct: 432 YRRG------------------NARQRRARVLELMDQVALPSHFHRRYPAELSGGQRQRV 473 Query: 839 KLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQ-GNTIVVIEHNLDVIK- 896 +AR L+ L + DEP + L Q+L +L +L+D+ G + + I H+L V++ Sbjct: 474 AIARALA---LNPELIVCDEPVSALDVLVQHQILTLLRRLQDELGLSYLFISHDLAVVRL 530 Query: 897 TADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLKPML 940 +D++ + G ++ + + E V R L + Sbjct: 531 ISDYVCVM------KDGRVVEAASSEEVFTNPRHPYTRRLLASI 568 Score = 128 bits (321), Expect = 1e-27, Method: Composition-based stats. Identities = 40/201 (19%), Positives = 73/201 (36%), Gaps = 27/201 (13%) Query: 416 REARHVYVENTPLPAISDMSIGHAMEF--------FNNLKLAGQRAKIAEKIL------- 460 + + E + A+ + + F++L + +I E+ L Sbjct: 377 PTSGEIRFEGKDVLALKGEGLKDFRQRVQAVFQDPFSSLNPSFTVGRIIEEPLQTYRRGN 436 Query: 461 -KEIGDR-LKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIG 518 ++ R L+ + V L R LSGG+ QR+ +A + L + V DEP Sbjct: 437 ARQRRARVLELMDQVALPSHFHRRYPAELSGGQRQRVAIARALA--LNPELIVCDEPVSA 494 Query: 519 LHQRDNERLLGTLIHLRDL-GNTVIVVEHDEDAIR-AADHVIDIGPGAGVHGGEVVAEGP 576 L ++L L L+D G + + + HD +R +D+V + G VV Sbjct: 495 LDVLVQHQILTLLRRLQDELGLSYLFISHDLAVVRLISDYVCVMKD------GRVVEAAS 548 Query: 577 LEAIMAVPESLTGQYMSGKRK 597 E + P + + Sbjct: 549 SEEVFTNPRHPYTRRLLASIP 569 Score = 42.3 bits (98), Expect = 0.099, Method: Composition-based stats. Identities = 23/132 (17%), Positives = 38/132 (28%), Gaps = 7/132 (5%) Query: 582 AVPESLTGQYMSGKRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGV 641 + G ++ + + ++ +LTLP G I G Sbjct: 4 KHDDGAPGPGVTPAVPAVGAPLLEIRDLDVEFTTQQGTVQAVEGASLTLPAGGTLAIVGE 63 Query: 642 SGSGKSTLINDT--LFPIAQRQLNGATIAEPAPYRDIQG----LEHFDKVIDIDQSPIGR 695 SGSGKST L P R G+ + ++ + Q P+ Sbjct: 64 SGSGKSTTAMAAIGLLPGNGRVTAGSVRFAGEELVGLPESRMRRIRGRRIGLVPQDPMSN 123 Query: 696 -TPRSNPATYTG 706 P + G Sbjct: 124 LNPVTRVGQQIG 135 >UniRef50_C7MBI3 ATPase component of various ABC-type transport systems with duplicated ATPase domain n=1 Tax=Brachybacterium faecium DSM 4810 RepID=C7MBI3_BRAFD Length = 643 Score = 224 bits (572), Expect = 1e-56, Method: Composition-based stats. Identities = 101/559 (18%), Positives = 183/559 (32%), Gaps = 81/559 (14%) Query: 419 RHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQR--------AKIAEKILK--------- 461 + E + +S+ I + + L Q ++ +I + Sbjct: 82 GQILFEGRDITHVSEKEIRVLRG--DQVGLVPQDPMSNLNPMWRVGAQIRETLQANGVAK 139 Query: 462 --EIGDRLKFLVNVGLNYLTLSR---SAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPS 516 E R L+ R SGG QR +A + A + V DEP+ Sbjct: 140 GAEARTRTVELLEEAGLADAARRAQQYPHEFSGGMKQRALIAMGLAAR--PKLLVADEPT 197 Query: 517 IGLHQRDNERLLGTLIHL-RDLGNTVIVVEHDEDAI-RAADHVIDIGPGAGVHGGEVVAE 574 L +++L L L +LG V+++ HD A H++ + + G+VV Sbjct: 198 SALDVTVQQQILDHLDSLTAELGVAVLLITHDLGLAAERAQHLVVM------YKGQVVES 251 Query: 575 GPLEAIMAVPESLTGQYMSGKRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGL 634 GP ++ P+ Q + ++ V A ++ + +P Sbjct: 252 GPALELLQNPQHPYTQRLISAAPSLASRRLVSAAQRAEVR---EQARESAQEAAGIPEAS 308 Query: 635 FTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQS-PI 693 + + A P + +V + +S PI Sbjct: 309 ------------EPSADAGPSAPSAAPAATADEPVPELGGSRTAADPVIQVQGLTKSFPI 356 Query: 694 GRTPRSNPATYTGVFTPVRELFAGVPESRARGYTPGRFSFNVRGGRCEACQG-------D 746 + + V E+ RG T + G A + Sbjct: 357 RGSVPWRTTPFLAVDDVSFEI--------ERGTTTAIVGESGSGKSTVAQMVLKLLEPTE 408 Query: 747 GVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAVPAL 806 G + E + + D +R + + Y + TIEE A Sbjct: 409 GRVLFEGRDV-TTFTGRDLKTLRRRVQPIFQNPYGTLDPMYSIFRTIEEPLRLHGIGDAK 467 Query: 807 AR---KLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGL 863 +R L V L + + LSGG+ QR+ +AR L+ + I DE + L Sbjct: 468 SREAKVRDLLDKVALPSAMMRRYPNELSGGQRQRIAIARALA---LDPEVVICDEAVSAL 524 Query: 864 HFADIQQLLDVLHKLRDQ-GNTIVVIEHNLDVIK-TADWIVDLGPEGGSGGGEILVSGTP 921 Q+L++L+ L+ + G + + I H+L V++ AD V + G+++ GT Sbjct: 525 DVLVQAQVLELLNDLQAELGLSYLFITHDLAVVRQIADSTVVM------EKGKVVEQGTT 578 Query: 922 ETVAECEAS-HTARFLKPM 939 + V +T R L + Sbjct: 579 DEVFHSPQQDYTKRLLAAI 597 Score = 48.8 bits (115), Expect = 9e-04, Method: Composition-based stats. Identities = 24/137 (17%), Positives = 38/137 (27%), Gaps = 13/137 (9%) Query: 593 SGKRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLIND 652 +G + E + ++ L + G I G SGSGKST Sbjct: 9 AGSEAGPAQPLLEIRDLEITFTTSSGPVQGVRSANLEVYPGETVAIVGESGSGKSTTAMA 68 Query: 653 T--LFPIAQRQLNGATIAEPAPYRDIQGLE----HFDKVIDIDQSPIGR-TPRSNPATYT 705 L G + E + E D+V + Q P+ P Sbjct: 69 IAHLLDKNGAITGGQILFEGRDITHVSEKEIRVLRGDQVGLVPQDPMSNLNPMWRVGA-- 126 Query: 706 GVFTPVRELFAGVPESR 722 +RE ++ Sbjct: 127 ----QIRETLQANGVAK 139 >UniRef50_Q47NW7 ATPase components of various ABC-type transport systems contain duplicated ATPase n=10 Tax=Bacteria RepID=Q47NW7_THEFY Length = 593 Score = 224 bits (570), Expect = 2e-56, Method: Composition-based stats. Identities = 88/530 (16%), Positives = 168/530 (31%), Gaps = 82/530 (15%) Query: 423 VENTPLPAISDMSIGHA---MEFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNVGLNY-- 477 + + + + N + A + + + L VG+ Sbjct: 98 MRGNDIAMVFQDPMSSLHPQYTIGNQIIEAYLTHRPTASRAEARRRAIDVLDRVGIPEPA 157 Query: 478 LTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLR-D 536 ++ SGG QR+ +A + + + DEP+ L ++L L LR D Sbjct: 158 KRINSYPHEFSGGMRQRVLIAMGLVCE--PKVLLADEPTTALDVTVQAQILDLLDELRRD 215 Query: 537 LGNTVIVVEHDEDAIR-AADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGK 595 L +I+V HD + + D+V+ + G V G + ++ P Q + Sbjct: 216 LRMALILVSHDLAVVAGSVDNVLVMRK------GVAVERGDVRQVLNSPSHPYTQQLLAA 269 Query: 596 RKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLF 655 + R + + G + + S +ST L Sbjct: 270 VP-RIEISRAQRRAQLRAEREGKTTPAAAET--------------PAPSQRSTDEEPLLS 314 Query: 656 PIAQRQLNGATIAEPAPYRDIQGLEHF-------DKVIDIDQSPIGRTPRSNPATYTGVF 708 RQ D ++ + + + +S G++ S Sbjct: 315 VRNVRQRFRIRGGLFGGATDFYAVDGVSFDLYRGETLGIVGESGSGKSTLSRMI------ 368 Query: 709 TPVRELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKG 768 +R L +G E ++M F + Sbjct: 369 --MRLLEPTEGTILFQGRDITHL--------PERKMRPLRRDIQMVFQNPYSSLNPR--- 415 Query: 769 KRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSAT 828 TI + + + E D R + L VGL + Sbjct: 416 --------------MTIGDSIGAPLRIQGER-DDKLIRTRVQELLERVGLEPSHYNRFPH 460 Query: 829 TLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQ-GNTIVV 887 SGG+ QR+ +AR L R L I DEP + L + Q+L +L +L++ T++ Sbjct: 461 AFSGGQRQRIAIARALILR---PQLVICDEPVSALDVSTQDQVLRLLAELQEDFNLTLIF 517 Query: 888 IEHNLDVIK-TADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFL 936 + H+L V++ +D ++ + G+++ +G + V E + L Sbjct: 518 VAHDLAVVRQISDRVLVMRK------GKVVETGDSDEVYENPQHPYTKQL 561 Score = 134 bits (338), Expect = 1e-29, Method: Composition-based stats. Identities = 41/232 (17%), Positives = 79/232 (34%), Gaps = 36/232 (15%) Query: 389 ESSAVREELAKFISNRPCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKL 448 ES + + L++ I L + + + + + + + Sbjct: 356 ESGSGKSTLSRMIMRL---------LEPTEGTILFQGRDITHLPERKMRPLRRDIQMVFQ 406 Query: 449 AG----------------QRAKIAEKILKEIGDRLKFLVNVGLNY-LTLSRSAETLSGGE 491 E+ K I R++ L+ +R SGG+ Sbjct: 407 NPYSSLNPRMTIGDSIGAPLRIQGERDDKLIRTRVQELLERVGLEPSHYNRFPHAFSGGQ 466 Query: 492 AQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGN-TVIVVEHDEDA 550 QRI +A + L + + DEP L +++L L L++ N T+I V HD Sbjct: 467 RQRIAIARALI--LRPQLVICDEPVSALDVSTQDQVLRLLAELQEDFNLTLIFVAHDLAV 524 Query: 551 IR-AADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEVP 601 +R +D V+ + G+VV G + + P+ + + + P Sbjct: 525 VRQISDRVLVMRK------GKVVETGDSDEVYENPQHPYTKQLLAAAPVLDP 570 Score = 49.6 bits (117), Expect = 6e-04, Method: Composition-based stats. Identities = 17/95 (17%), Positives = 32/95 (33%), Gaps = 6/95 (6%) Query: 607 ANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKS--TLINDTLFPIAQRQLNG 664 + + +++++ + G I G SGSGKS +L L + QL+G Sbjct: 19 RDLSITFSTDDGDVHAVQNLSFEVAEGEALGIVGESGSGKSVTSLALMGLHRDTRAQLSG 78 Query: 665 ATIAEPAPYRDIQGLE----HFDKVIDIDQSPIGR 695 E + + + Q P+ Sbjct: 79 EIRVAGIDVVTASDQEIRAMRGNDIAMVFQDPMSS 113 >UniRef50_A4AFN6 Putative ABC transporter, ATP-binding protein n=1 Tax=marine actinobacterium PHSC20C1 RepID=A4AFN6_9ACTN Length = 524 Score = 224 bits (570), Expect = 2e-56, Method: Composition-based stats. Identities = 93/523 (17%), Positives = 164/523 (31%), Gaps = 104/523 (19%) Query: 424 ENTPLPAISDMSIGHAMEFFN---NLKLAGQRAKIAEKILKEIGDRL-KFLVNVGLNYLT 479 + + + + Q A E + + L V L Sbjct: 85 RGRRISLLLQDPFTSLSPVHRCGTQIAMTIQAASTTRLSRAECAELVTHRLAEVNLPADV 144 Query: 480 LSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDL-G 538 LSGG QR+ +A+ + + + DEP+ L + +L L L++ G Sbjct: 145 ARAFPHELSGGMRQRVAIAAALAT--DPELLIADEPTTALDASNQGEILDLLRGLQEQRG 202 Query: 539 NTVIVVEHDEDAIR-AADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRK 597 +++ HD +R A++V+ + GE+V G +++ P + + Sbjct: 203 MAALLISHDLGMVRGRAENVLVM------RHGEIVERGDTSSVLNSPSHPYTRALIEADP 256 Query: 598 IEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPI 657 + G+ +G++G G S + Sbjct: 257 SLTDRS----------------------------AGVVRAASGINGDG-SKTGDLVAATN 287 Query: 658 AQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAG 717 + T+ +G + V + +S G+T + + T F G Sbjct: 288 LTKSFGDKTVLRGVDVTVGRG----ETVGIVGESGSGKTTIARCIAGLELETSGVIEFDG 343 Query: 718 VPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMH--FLPDIYVPCDQCKGKRYNRET 775 V + R I +M F R + Sbjct: 344 VALAPGR---------------------ASRIPTQMQIVFQDPYSSLNPMISVGRSLKLA 382 Query: 776 LEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEA 835 L + + + L V L + LSGG+ Sbjct: 383 LRVAQRPAS-----------------------DLNGLLHLVELPVEFARKRPAELSGGQR 419 Query: 836 QRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLR-DQGNTIVVIEHNLDV 894 QRV +AR L+ + L I DE + L + +Q+LD+L KLR D G +I+ I H+L V Sbjct: 420 QRVAIARALAVQ---PQLLICDESVSALDVSVQKQILDLLAKLRVDLGLSILFISHDLAV 476 Query: 895 IK-TADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFL 936 ++ AD + L GE++ SG V + L Sbjct: 477 VRQLADRVYVLR------NGEVVESGECHDVLNSPTHPYTQAL 513 Score = 122 bits (305), Expect = 8e-26, Method: Composition-based stats. Identities = 52/266 (19%), Positives = 96/266 (36%), Gaps = 25/266 (9%) Query: 348 LYGSGKENIEFKYMNDRGDTSIRRHPFEGVLHNMERRYKET---ESSAVREELAKFISNR 404 + G G + + + + + GV + R ES + + +A+ I+ Sbjct: 272 INGDGSKTGDLVAATNLTKSFGDKTVLRGVDVTVGRGETVGIVGESGSGKTTIARCIAGL 331 Query: 405 PCASCE-----GTRLRR-EARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEK 458 + G L A + + + S+ + +LKLA + A+ Sbjct: 332 ELETSGVIEFDGVALAPGRASRIPTQMQIVFQDPYSSLNPMISVGRSLKLALRVAQRPAS 391 Query: 459 ILKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIG 518 L + ++ L + LSGG+ QR+ +A + + + + DE Sbjct: 392 DLNGLLHLVE------LPVEFARKRPAELSGGQRQRVAIARALA--VQPQLLICDESVSA 443 Query: 519 LHQRDNERLLGTLIHLR-DLGNTVIVVEHDEDAIR-AADHVIDIGPGAGVHGGEVVAEGP 576 L +++L L LR DLG +++ + HD +R AD V + GEVV G Sbjct: 444 LDVSVQKQILDLLAKLRVDLGLSILFISHDLAVVRQLADRVYVL------RNGEVVESGE 497 Query: 577 LEAIMAVPESLTGQYMSGKRKIEVPK 602 ++ P Q + E P Sbjct: 498 CHDVLNSPTHPYTQALVAASIHEAPA 523 >UniRef50_A4EGJ4 Probable ABC transporter, ATP-binding protein n=2 Tax=Rhodobacterales RepID=A4EGJ4_9RHOB Length = 567 Score = 223 bits (568), Expect = 3e-56, Method: Composition-based stats. Identities = 94/527 (17%), Positives = 159/527 (30%), Gaps = 68/527 (12%) Query: 423 VENTPLPAISDMSIGHAMEFFN-NLKLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTLS 481 V + I +L A+ R L+ Sbjct: 84 VRGDRISMIFQDPQTSLNPLMTIEDQLIETIQAHADVSTAAARQRAVDLLEEIGIKNAAE 143 Query: 482 R---SAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHL-RDL 537 R SGG QR+ +A I + + DEP+ L ++L + L +D Sbjct: 144 RIKAYPHQFSGGMRQRVVIALAICT--DPELIIADEPTTALDVAVQSQVLKLIQRLAKDR 201 Query: 538 GNTVIVVEHDEDAIR-AADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKR 596 +++ HD I AD V + G V+ G ++ P + + Sbjct: 202 KIAFMLITHDIGVIAQVADRVTVMRK------GRVMETGETAQVLGAPRHPYTRALMDA- 254 Query: 597 KIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGS--GKSTLINDTL 654 VP + +V + GA + GV G+ G + Sbjct: 255 ---VPPLDYRIDRFRVPQEEGADFERSLGQ-----KAEDWLLAGVQGAPTGLTLQNLYVR 306 Query: 655 FPIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVREL 714 F + L A + + + +S G++ + T + + Sbjct: 307 FAGPRTSLFRKPEPYVALNDVSLTVRPGSIMGLVGESGSGKSTLAKAITGLVKPSDGTMI 366 Query: 715 FAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRE 774 + S V+M F + + Sbjct: 367 LGDEVLPGGKARDRHHPS---------------RQLVQMVFQDPYSSLNSRHR------- 404 Query: 775 TLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGE 834 I VL+ + DA L VG+ + + SGG+ Sbjct: 405 ----------IGAVLEEPLWFYGFVKDADQRKELAASMLALVGMQPDAIDKYPHQFSGGQ 454 Query: 835 AQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQ-GNTIVVIEHNLD 893 QR+ +AR L R I DEPT+ L + ++L++L L+ + G TI+ I HNL Sbjct: 455 RQRIAVARALLAR---PRFLICDEPTSALDVSIQAEILNLLKDLQAKFGLTILFISHNLT 511 Query: 894 VIK-TADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLKPM 939 V++ AD L G+I G E V E + + L + Sbjct: 512 VVRQMADDTAVLR------NGKIEEIGKTEDVYERPQAAYTKSLLAL 552 Score = 120 bits (302), Expect = 2e-25, Method: Composition-based stats. Identities = 58/355 (16%), Positives = 108/355 (30%), Gaps = 50/355 (14%) Query: 283 LGVQQYFDPDRVIQNPELSLAGGAIR-GWDRRNFYYFQMLKSLADHYKFDVE---AP--- 335 +GV + + G Y + L + ++ P Sbjct: 212 IGVIAQVADRVTVMRKGRVMETGETAQVLGAPRHPYTRALMDAVPPLDYRIDRFRVPQEE 271 Query: 336 ----WGSLSANVHKVVLYGSGK-------ENIEFKYMNDRGDTSIRRHPFEGVLHNMERR 384 SL +L G +N+ ++ R + P+ L+++ Sbjct: 272 GADFERSLGQKAEDWLLAGVQGAPTGLTLQNLYVRFAGPRTSLFRKPEPYV-ALNDVSLT 330 Query: 385 YKET-------ESSAVREELAKFISNRPCASCEGTRLRREAR---HVYVENTPLPAISDM 434 + ES + + LAK I+ S L E + P + M Sbjct: 331 VRPGSIMGLVGESGSGKSTLAKAITGLVKPSDGTMILGDEVLPGGKARDRHHPSRQLVQM 390 Query: 435 SIGHAMEFFNNLKLAGQRAKI---------AEKILKEIGDRLKFLVNVGLNYLTLSRSAE 485 N+ G + KE+ L VG+ + + Sbjct: 391 VFQDPYSSLNSRHRIGAVLEEPLWFYGFVKDADQRKELAA--SMLALVGMQPDAIDKYPH 448 Query: 486 TLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDL-GNTVIVV 544 SGG+ QRI +A + A + DEP+ L +L L L+ G T++ + Sbjct: 449 QFSGGQRQRIAVARALLAR--PRFLICDEPTSALDVSIQAEILNLLKDLQAKFGLTILFI 506 Query: 545 EHDEDAIR-AADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKI 598 H+ +R AD A + G++ G E + P++ + + + Sbjct: 507 SHNLTVVRQMAD------DTAVLRNGKIEEIGKTEDVYERPQAAYTKSLLALTPV 555 Score = 43.8 bits (102), Expect = 0.034, Method: Composition-based stats. Identities = 22/110 (20%), Positives = 41/110 (37%), Gaps = 8/110 (7%) Query: 621 NNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPI--AQRQLNGATIAEPAPYRDIQG 678 ++DV + + G + G SG+GKST+ + + +G+ R + Sbjct: 19 TAIEDVDMVIKPGEIHGLVGESGAGKSTVGAAVIGLLQSPGYIAHGSLTLGDTDLRTLTP 78 Query: 679 LEHF----DKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESRAR 724 + D++ I Q P +T + T + A V + AR Sbjct: 79 EQAHAVRGDRISMIFQDP--QTSLNPLMTIEDQLIETIQAHADVSTAAAR 126 >UniRef50_A4JN23 ABC transporter related n=24 Tax=Bacteria RepID=A4JN23_BURVG Length = 654 Score = 222 bits (567), Expect = 4e-56, Method: Composition-based stats. Identities = 98/528 (18%), Positives = 175/528 (33%), Gaps = 50/528 (9%) Query: 423 VENTPLPAISDMSIGHAMEFFNNLKLAGQ-----RAKIAEKILKEIGDRLKFLVNVGLNY 477 + + I + F + ++K A + E RL LV + Sbjct: 106 IRGADIAMIFQEPMTSLNPVFTVGDQISEAIALHQSKGASEARAETL-RLLDLVRIPEAR 164 Query: 478 LTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDL 537 +R LSGG QR+ +A + + + DEP+ L ++L + L+D Sbjct: 165 RVFARYPHQLSGGMRQRVMIAMALSCR--PALLIADEPTTALDVTIQAQILQLIRGLQDE 222 Query: 538 -GNTVIVVEHDEDAI-RAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPES-LTGQYMSG 594 VI + HD + AD V+ + + GE V EG E I A P T ++ Sbjct: 223 MKMGVIFITHDMGVVAEVADRVLVM------YRGEKVEEGASERIFATPAHRYTRALLAA 276 Query: 595 KRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTL 654 ++ + +L + G R V+ T + +N Sbjct: 277 VPRLGSMQGTDTPEKFPLLSVDGTRAT----VSAEDAAATANVATTPN------ALNPVD 326 Query: 655 FPIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVR-E 713 P L+ + A ++ + + P+ Y V + Sbjct: 327 APQPATDLSAHASIDRAASPILRVRDLVTRF------PVKSGVFGRVLQYVHAVERVSFD 380 Query: 714 LFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNR 773 L AG + G+ S R G I+ + + D +R + Sbjct: 381 LHAGETLALVGESGCGK-STTGRSLLRLVESQSGSIEFDGRDIS-ALKGHDLQALRRNIQ 438 Query: 774 ETLEIKYKGKTIHEVLDMTIEEAR---EFFDAVPALARKLQTLMDVGLTYIRLGQSATTL 830 + + + +I E A AR L VGL + Sbjct: 439 FIFQDPFASLNPRLTVGFSIMEPLLVHRVSSGRDAQARVDWLLDKVGLPPDAARRYPHEF 498 Query: 831 SGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKL-RDQGNTIVVIE 889 SGG+ QR+ +AR L+ + I DE + L + Q+++++ L R+ G + I Sbjct: 499 SGGQRQRIAIARALA---LNPKVVIADESVSALDVSVQAQIVNLMLDLQRELGVAYLFIS 555 Query: 890 HNLDVI-KTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFL 936 H++ V+ + + + + G+I+ G V E R L Sbjct: 556 HDMAVVERISHRVAVM------YLGQIVEIGPRRAVFEAPQHPYTRKL 597 Score = 123 bits (309), Expect = 3e-26, Method: Composition-based stats. Identities = 37/212 (17%), Positives = 77/212 (36%), Gaps = 27/212 (12%) Query: 417 EARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQR---------AKIAEKIL------- 460 ++ + + + A+ + + I E +L Sbjct: 411 QSGSIEFDGRDISALKGHDLQALRRNIQFIFQDPFASLNPRLTVGFSIMEPLLVHRVSSG 470 Query: 461 KEIGDRLKFLVN-VGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGL 519 ++ R+ +L++ VGL R SGG+ QRI +A + L + + DE L Sbjct: 471 RDAQARVDWLLDKVGLPPDAARRYPHEFSGGQRQRIAIARALA--LNPKVVIADESVSAL 528 Query: 520 HQRDNERLLGTLIHL-RDLGNTVIVVEHDEDAI-RAADHVIDIGPGAGVHGGEVVAEGPL 577 +++ ++ L R+LG + + HD + R + V + + G++V GP Sbjct: 529 DVSVQAQIVNLMLDLQRELGVAYLFISHDMAVVERISHRVAVM------YLGQIVEIGPR 582 Query: 578 EAIMAVPESLTGQYMSGKRKIEVPKKRVPANP 609 A+ P+ + + + P +R Sbjct: 583 RAVFEAPQHPYTRKLMNAVPVADPARRHAPRQ 614 Score = 44.6 bits (104), Expect = 0.017, Method: Composition-based stats. Identities = 22/119 (18%), Positives = 37/119 (31%), Gaps = 12/119 (10%) Query: 587 LTGQYMSGKRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGK 646 +T + + + A + ++DV+ + G I G SGSGK Sbjct: 1 MTSSRTPSALVLPEQRVVAVDGLSVTFRRENATFDAVRDVSFHVDRGETLAIVGESGSGK 60 Query: 647 S--TLINDTL----------FPIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPI 693 S +L L + R+ GA + A + I Q P+ Sbjct: 61 SVTSLALMRLVEHGGGEITSGRMVLRRRGGALVDLAAASAAAMRGIRGADIAMIFQEPM 119 >UniRef50_C5BV59 ABC transporter related n=4 Tax=Actinobacteria (class) RepID=C5BV59_BEUC1 Length = 600 Score = 222 bits (566), Expect = 4e-56, Method: Composition-based stats. Identities = 98/538 (18%), Positives = 162/538 (30%), Gaps = 62/538 (11%) Query: 412 TRLRREARHVYVENTPLPAISDMSIGHAMEFFN-NLKLAGQRAKIAEKILKEIGDRLKFL 470 RLR A+ + L + + + +L R L Sbjct: 100 ARLRP-AQLQQMRGRVLGLVPQDPMSNLNPVARVGRQLVETLEDTGVARGAAARTRAAEL 158 Query: 471 VNVGLNYLTLSR---SAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERL 527 + R SGG QR +A + + V DEP+ L + Sbjct: 159 LAEAGLPDAEDRMGAYPHEFSGGMRQRALIAIGLAGS--PRLLVADEPTSALDVTVQRVI 216 Query: 528 LGTLIHL-RDLGNTVIVVEHDEDAI-RAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPE 585 L L L LG V+++ HD A HV+ + H G VV GP I+ P+ Sbjct: 217 LDRLEDLTSSLGAAVLLITHDLGLAAERASHVVVM------HRGRVVELGPARQILVDPQ 270 Query: 586 SLTGQYMSGKRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSG 645 + + G ++ A + Sbjct: 271 HEYTKRLLGAAPSLASRRIQIAKDVGADDVVEGADLLAAAARDESAD------------- 317 Query: 646 KSTLINDTLFPIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYT 705 + D A + + + P + V+ +D R Sbjct: 318 --AVATDDAAGAAIPVVRARNLRKVFPGARKGLVGRHPDVVAVDDVSF-TIQRGRTLGIV 374 Query: 706 GVFTPVRELFAGVPESRARGYTPG-RFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCD 764 G + A + + G R A + ++V+ F Sbjct: 375 GESGSGKSTVARMLLDLLPPTSGTIEIDGEQVGVRSRAEEVAFRLRVQPIFQDPYSSLDP 434 Query: 765 QCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLG 824 R E L A DA AR L+ L V L L Sbjct: 435 LYTIYRTIEEPLR------------------AHRLGDADARRARVLELLDAVALPADILN 476 Query: 825 QSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQ-GN 883 + LSGG+ QRV +AR L+ + + DE + L Q+L +L L+ + G Sbjct: 477 RYPAELSGGQRQRVAIARALA---PAPEILVCDEAVSALDVIVQSQILHLLADLQSRLGL 533 Query: 884 TIVVIEHNLDVIK-TADWIVDLGPEGGSGGGEILVSGTPETVAECEA-SHTARFLKPM 939 + + I H+L VI+ AD + + G ++ +G + V + ++T R L + Sbjct: 534 SYLFISHDLAVIRQIADEVCVMEH------GRVVEAGPTDRVFDDPQDAYTRRLLAAI 585 Score = 130 bits (328), Expect = 2e-28, Method: Composition-based stats. Identities = 43/220 (19%), Positives = 80/220 (36%), Gaps = 20/220 (9%) Query: 389 ESSAVREELAKFISNRPCASCE---------GTRLRREARHVYVENTPLPAISDMSIGHA 439 ES + + +A+ + + + G R R E + P+ S+ Sbjct: 376 ESGSGKSTVARMLLDLLPPTSGTIEIDGEQVGVRSRAEEVAFRLRVQPIFQDPYSSLDPL 435 Query: 440 MEFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLAS 499 + ++ + ++ + + L+ L V L L+R LSGG+ QR+ +A Sbjct: 436 YTIYRTIEEPLRAHRLGDADAR-RARVLELLDAVALPADILNRYPAELSGGQRQRVAIAR 494 Query: 500 QIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDL-GNTVIVVEHDEDAIR-AADHV 557 + + V DE L ++L L L+ G + + + HD IR AD V Sbjct: 495 ALA--PAPEILVCDEAVSALDVIVQSQILHLLADLQSRLGLSYLFISHDLAVIRQIADEV 552 Query: 558 IDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRK 597 + G VV GP + + P+ + + Sbjct: 553 CVM------EHGRVVEAGPTDRVFDDPQDAYTRRLLAAIP 586 Score = 43.8 bits (102), Expect = 0.031, Method: Composition-based stats. Identities = 19/120 (15%), Positives = 38/120 (31%), Gaps = 6/120 (5%) Query: 581 MAVPESLTGQYMSGKRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITG 640 + + + +T ++ E + DVT + G I G Sbjct: 5 LPIDDEVTDDDVARPGADPTAPLVSVRGLEVTFRTEQGPLVAASDVTFDIAAGQTLAIVG 64 Query: 641 VSGSGKSTLINDTLF--PIAQRQLNGATIAEPAPYRDIQGLEHFDK----VIDIDQSPIG 694 SGSGK+T+ + L P G + + ++ + + + Q P+ Sbjct: 65 ESGSGKTTVASAVLGLLPSNGSVTAGQVLVDGRDVARLRPAQLQQMRGRVLGLVPQDPMS 124 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.312 0.141 0.397 Lambda K H 0.267 0.0431 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 5,802,255,046 Number of Sequences: 3077464 Number of extensions: 268294522 Number of successful extensions: 1449149 Number of sequences better than 1.0e-01: 250 Number of HSP's better than 0.1 without gapping: 26884 Number of HSP's successfully gapped in prelim test: 21473 Number of HSP's that attempted gapping in prelim test: 1082746 Number of HSP's gapped (non-prelim): 224052 length of query: 940 length of database: 1,040,396,356 effective HSP length: 138 effective length of query: 802 effective length of database: 615,706,324 effective search space: 493796471848 effective search space used: 493796471848 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.3 bits) S2: 98 (42.3 bits)